HHsearch alignment for GI: 254780129 and conserved domain: TIGR01420

>TIGR01420 pilT_fam twitching motility protein; InterPro: IPR006321 These represent the PilT subfamily of proteins related to GspE, a protein involved in type II secretion (also called the General Secretion Pathway). PilT is an apparent cytosolic ATPase associated with type IV pilus systems. It is not required for pilin biogenesis, but is required for twitching motility and social gliding behaviors, shown in some species, powered by pilus retraction . Members of this family may be found in some species that do not have type IV pili but have related structures for DNA uptake and natural transformation. ; GO: 0005524 ATP binding, 0006810 transport.
Probab=93.52  E-value=0.18  Score=27.57  Aligned_cols=42  Identities=19%  Similarity=0.225  Sum_probs=25.0

Q ss_pred             HHHHHHHHCCCCE-EE-ECCCCCHHHHHHHHHHHHHHCCCCCEE
Q ss_conf             9999999679819-99-689998899999999999740899489
Q gi|254780129|r   11 VMVNWLLSHDRCA-LW-ASMGSGKTVSVLFALSTIKILDPRPVL   52 (220)
Q Consensus        11 ~a~~~~~~~~~~~-l~-~~~G~GKT~~ai~~~~~~~~~~~~~~L   52 (220)
T Consensus       117 ~v~~~~a~~~~GLiLVTGPTGSGKSTTlAsmIDyIN~~~~~HIi  160 (350)
T TIGR01420       117 PVLRELAERPRGLILVTGPTGSGKSTTLASMIDYINKNKAGHII  160 (350)
T ss_pred             HHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHHHHCCCCCCCE
T ss_conf             89999983669938987688986789999999787403888825