HHsearch alignment for GI: 254780129 and conserved domain: cd00009
>cd00009 AAA The AAA+ (ATPases Associated with a wide variety of cellular Activities) superfamily represents an ancient group of ATPases belonging to the ASCE (for additional strand, catalytic E) division of the P-loop NTPase fold. The ASCE division also includes ABC, RecA-like, VirD4-like, PilT-like, and SF1/2 helicases. Members of the AAA+ ATPases function as molecular chaperons, ATPase subunits of proteases, helicases, or nucleic-acid stimulated ATPases. The AAA+ proteins contain several distinct features in addition to the conserved alpha-beta-alpha core domain structure and the Walker A and B motifs of the P-loop NTPases.
Probab=96.72 E-value=0.0055 Score=36.28 Aligned_cols=47 Identities=15% Similarity=0.082 Sum_probs=24.4
Q ss_pred CCCCEEEECCCCCHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHH
Q ss_conf 7981999689998899999999999740899489972331013788999
Q gi|254780129|r 19 HDRCALWASMGSGKTVSVLFALSTIKILDPRPVLIIAPLRVAQYVWKDE 67 (220)
Q Consensus 19 ~~~~~l~~~~G~GKT~~ai~~~~~~~~~~~~~~LIi~P~s~~~~~W~~e 67 (220)
T Consensus 19 ~~~ill~GppGtGKT~la~~ia~~~~~-~~~~~~~~~~~~~~-~~~~~~ 65 (151)
T cd00009 19 PKNLLLYGPPGTGKTTLARAIANELFR-PGAPFLYLNASDLL-EGLVVA 65 (151)
T ss_pred CCEEEEECCCCCCHHHHHHHHHHHHCC-CCCCEEEEEHHHCC-HHHHHH
T ss_conf 980899899998865999999997121-37982785477704-677775