HHsearch alignment for GI: 254780129 and conserved domain: cd00046
>cd00046 DEXDc DEAD-like helicases superfamily. A diverse family of proteins involved in ATP-dependent RNA or DNA unwinding. This domain contains the ATP-binding region.
Probab=99.79 E-value=8.8e-19 Score=127.03 Aligned_cols=140 Identities=24% Similarity=0.302 Sum_probs=91.5
Q ss_pred CCCEEEECCCCCHHHHHHHHH-HHHHHCCCCCEEEEECCCCCHHHHHHHHHHHCCCCCCEEEEEECCC--CCCCCCCCCC
Q ss_conf 981999689998899999999-9997408994899723310137889999851553460699861121--0112234567
Q gi|254780129|r 20 DRCALWASMGSGKTVSVLFAL-STIKILDPRPVLIIAPLRVAQYVWKDEVERWSAFSDMTVSSLIGSE--RQRIKALNTP 96 (220)
Q Consensus 20 ~~~~l~~~~G~GKT~~ai~~~-~~~~~~~~~~~LIi~P~s~~~~~W~~e~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~ 96 (220)
T Consensus 1 ~~~lv~~ptGsGKT~~~~~~~~~~~~~~~~~~~lil~Pt~~L~~q~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 79 (144)
T cd00046 1 RDVLLAAPTGSGKTLAALLPILELLDSLKGGQVLVLAPTRELANQVAERLKELFGE-GIKVGYLIGGTSIKQQEKLLSGK 79 (144)
T ss_pred CCEEEECCCCCHHHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHHCCC-CCEEEEEECCCCHHHHHHHHCCC
T ss_conf 99999889971799999999999997568976999746799999999999997488-71799996136367789874589
Q ss_pred CCEEEECHHHHHCCCC-CCCCCCCCCCCCCCHHHCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEECCCC
Q ss_conf 6627865667310000-0000247200002512201365433203699999998513798799831653
Q gi|254780129|r 97 AHLYIINFENIPWLVK-MKLDHWDFATIVVDESTKLKSFRTHQGTKQTRALGKVAFSKVKRFIELTGTP 164 (220)
Q Consensus 97 ~~~~i~~~~~l~~~~~-~~~~~~~~~~iIiDEaH~~kn~~~~~~~k~~k~l~~~~~~~~~~~l~LTgTP 164 (220)
T Consensus 80 ~~ilv~T~~~l~~~~~~~~~~~~~~~~vViDEaH~~~~~~~--~~~~~~~~~~--~~~~~~~l~lSATp 144 (144)
T cd00046 80 TDIVVGTPGRLLDELERLKLSLKKLDLLILDEAHRLLNQGF--GLLGLKILLK--LPKDRQVLLLSATP 144 (144)
T ss_pred CCEEECCHHHHHHHHHCCCCCCCCCCEEEEECHHHHHCCCC--HHHHHHHHHH--CCCCCCEEEECCCC
T ss_conf 84998288999999973876555100999988887643796--9999999996--79999489982899