HHsearch alignment for GI: 254780129 and conserved domain: cd00046

>cd00046 DEXDc DEAD-like helicases superfamily. A diverse family of proteins involved in ATP-dependent RNA or DNA unwinding. This domain contains the ATP-binding region.
Probab=99.79  E-value=8.8e-19  Score=127.03  Aligned_cols=140  Identities=24%  Similarity=0.302  Sum_probs=91.5

Q ss_pred             CCCEEEECCCCCHHHHHHHHH-HHHHHCCCCCEEEEECCCCCHHHHHHHHHHHCCCCCCEEEEEECCC--CCCCCCCCCC
Q ss_conf             981999689998899999999-9997408994899723310137889999851553460699861121--0112234567
Q gi|254780129|r   20 DRCALWASMGSGKTVSVLFAL-STIKILDPRPVLIIAPLRVAQYVWKDEVERWSAFSDMTVSSLIGSE--RQRIKALNTP   96 (220)
Q Consensus        20 ~~~~l~~~~G~GKT~~ai~~~-~~~~~~~~~~~LIi~P~s~~~~~W~~e~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~   96 (220)
T Consensus         1 ~~~lv~~ptGsGKT~~~~~~~~~~~~~~~~~~~lil~Pt~~L~~q~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~   79 (144)
T cd00046           1 RDVLLAAPTGSGKTLAALLPILELLDSLKGGQVLVLAPTRELANQVAERLKELFGE-GIKVGYLIGGTSIKQQEKLLSGK   79 (144)
T ss_pred             CCEEEECCCCCHHHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHHCCC-CCEEEEEECCCCHHHHHHHHCCC
T ss_conf             99999889971799999999999997568976999746799999999999997488-71799996136367789874589


Q ss_pred             CCEEEECHHHHHCCCC-CCCCCCCCCCCCCCHHHCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEECCCC
Q ss_conf             6627865667310000-0000247200002512201365433203699999998513798799831653
Q gi|254780129|r   97 AHLYIINFENIPWLVK-MKLDHWDFATIVVDESTKLKSFRTHQGTKQTRALGKVAFSKVKRFIELTGTP  164 (220)
Q Consensus        97 ~~~~i~~~~~l~~~~~-~~~~~~~~~~iIiDEaH~~kn~~~~~~~k~~k~l~~~~~~~~~~~l~LTgTP  164 (220)
T Consensus        80 ~~ilv~T~~~l~~~~~~~~~~~~~~~~vViDEaH~~~~~~~--~~~~~~~~~~--~~~~~~~l~lSATp  144 (144)
T cd00046          80 TDIVVGTPGRLLDELERLKLSLKKLDLLILDEAHRLLNQGF--GLLGLKILLK--LPKDRQVLLLSATP  144 (144)
T ss_pred             CCEEECCHHHHHHHHHCCCCCCCCCCEEEEECHHHHHCCCC--HHHHHHHHHH--CCCCCCEEEECCCC
T ss_conf             84998288999999973876555100999988887643796--9999999996--79999489982899