HHsearch alignment for GI: 254780129 and conserved domain: pfam00265
>pfam00265 TK Thymidine kinase.
Probab=95.32 E-value=0.19 Score=27.41 Aligned_cols=124 Identities=13% Similarity=0.091 Sum_probs=59.0
Q ss_pred EEEECCCCCHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCCCEEEE
Q ss_conf 99968999889999999999974089948997233101378899998515534606998611210112234567662786
Q gi|254780129|r 23 ALWASMGSGKTVSVLFALSTIKILDPRPVLIIAPLRVAQYVWKDEVERWSAFSDMTVSSLIGSERQRIKALNTPAHLYII 102 (220)
Q Consensus 23 ~l~~~~G~GKT~~ai~~~~~~~~~~~~~~LIi~P~s~~~~~W~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 102 (220)
T Consensus 5 ~i~GpMfsGKTteLi~~~~~~~~-~gkkvl~i~p~~D~R~------------~~~~i~Sh~g~~~~--------~~-~~- 61 (175)
T pfam00265 5 LIIGPMFSGKSTELIRRVYRYQL-AQYKCVVIKYAIDNRY------------GTGKVVTHDGISME--------AK-LI- 61 (175)
T ss_pred EEECCCCCHHHHHHHHHHHHHHH-CCCEEEEEEECCCCCC------------CCCEEECCCCCCCC--------CE-EC-
T ss_conf 99925177899999999999998-7993999946112778------------99969889998114--------56-73-
Q ss_pred CHHHHHCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCHHHHHHHHHHHHHCCCC--EEEEECCCCCCCCHHHHHHHHHHHC
Q ss_conf 56673100000000247200002512201365433203699999998513798--7998316532488899999999828
Q gi|254780129|r 103 NFENIPWLVKMKLDHWDFATIVVDESTKLKSFRTHQGTKQTRALGKVAFSKVK--RFIELTGTPSPNGLIDLWGQIWFLD 180 (220)
Q Consensus 103 ~~~~l~~~~~~~~~~~~~~~iIiDEaH~~kn~~~~~~~k~~k~l~~~~~~~~~--~~l~LTgTPi~n~~~el~~ll~~l~ 180 (220)
T Consensus 62 ~~~~~~~~~~~~--~~~~dvI~IDEaQFf~~--------l~~~~~~~~-~~~~~Viv~GLd~D~~~~~F~~i~~Li~~Ad 130 (175)
T pfam00265 62 KTSLLDDIKDII--SNTIHVVGIDEAQFFDD--------IVEFCETMA-NLGKIVIVAGLDGDFQRKPFGNILNLLPLAE 130 (175)
T ss_pred CCCHHHHHHHHH--CCCCCEEEEEHHHHHHH--------HHHHHHHHH-HCCCEEEEEEEECCCCCCCCHHHHHHHHHCC
T ss_conf 653199999864--36878999833775264--------899999999-6799499987503011585447999996279