HHsearch alignment for GI: 254780129 and conserved domain: pfam03237
>pfam03237 Terminase_6 Terminase-like family. This family represents a group of terminase proteins.
Probab=96.26 E-value=0.061 Score=30.30 Aligned_cols=137 Identities=23% Similarity=0.282 Sum_probs=61.9
Q ss_pred ECCCCCHHHHHH-HHHHHHHHCCCCCEEEEECCCC-CHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCCCEEEEC
Q ss_conf 689998899999-9999997408994899723310-13788999985155346069986112101122345676627865
Q gi|254780129|r 26 ASMGSGKTVSVL-FALSTIKILDPRPVLIIAPLRV-AQYVWKDEVERWSAFSDMTVSSLIGSERQRIKALNTPAHLYIIN 103 (220)
Q Consensus 26 ~~~G~GKT~~ai-~~~~~~~~~~~~~~LIi~P~s~-~~~~W~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 103 (220)
T Consensus 4 ggr~~GKT~~~~~~~~~~a~~~~~~~~~i~~~t~~~~~~~~~~~~~~~~~~-~~~~-~~~~~~~~~i-~~~nGs~i~~~~ 80 (380)
T pfam03237 4 GSRQSGKTFAFAREALRHALGNGPKNQIILSASKAQARLEFKKGIIEIAGD-LLEI-TFEEKNGNPI-ILPNGAKLYFLG 80 (380)
T ss_pred CCCCCCHHHHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHHHHHHHH-HCCC-CEEECCCCEE-EECCCCEEEEEE
T ss_conf 645252839999999999985899728999799999999999999996688-6387-1672788739-915998899962
Q ss_pred HHHHHCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCHHHHHHHHHHHHHCCC-CEEEEECCCCCCCCH-HHHH
Q ss_conf 667310000000024720000251220136543320369999999851379-879983165324888-9999
Q gi|254780129|r 104 FENIPWLVKMKLDHWDFATIVVDESTKLKSFRTHQGTKQTRALGKVAFSKV-KRFIELTGTPSPNGL-IDLW 173 (220)
Q Consensus 104 ~~~l~~~~~~~~~~~~~~~iIiDEaH~~kn~~~~~~~k~~k~l~~~~~~~~-~~~l~LTgTPi~n~~-~el~ 173 (220)
T Consensus 81 ~~~~~-~-~~~~rG~~~~~i~~DE~a~~~~~------~~~~~~~~~~~~~~~~~~~~~stp~~~~~~~~~~~ 144 (380)
T pfam03237 81 LESET-T-AQGYRGASIAGIYFDEATWLPKF------QESELVRRLRATKGKWRKTFFSTPPSPGHWVYDFW 144 (380)
T ss_pred CCCCC-C-HHHCCCCCCCEEEEEEHHHCCCH------HHHHHHHHHHCCCCCCCEEEEECCCCCCCCHHHHH
T ss_conf 57766-4-31034854554998304536627------89999864410479975799988989985198998