HHsearch alignment for GI: 254780129 and conserved domain: pfam07652

>pfam07652 Flavi_DEAD Flavivirus DEAD domain.
Probab=99.10  E-value=6.8e-10  Score=75.97  Aligned_cols=133  Identities=17%  Similarity=0.090  Sum_probs=74.3

Q ss_pred             CEEEECCCCCHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCCCEEE
Q ss_conf             19996899988999999999997408994899723310137889999851553460699861121011223456766278
Q gi|254780129|r   22 CALWASMGSGKTVSVLFALSTIKILDPRPVLIIAPLRVAQYVWKDEVERWSAFSDMTVSSLIGSERQRIKALNTPAHLYI  101 (220)
Q Consensus        22 ~~l~~~~G~GKT~~ai~~~~~~~~~~~~~~LIi~P~s~~~~~W~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i  101 (220)
T Consensus         5 t~ld~HPGaGKTr~vLP~~v~~~i~~~lRtlVLaPTRVV~----~Em~eAL~g~~vr~~t~--a~~~---~~~~~~ivdv   75 (146)
T pfam07652         5 TVLDLHPGAGKTRKVLPELVRECIDRRLRTLVLAPTRVVL----AEMEEALRGLPIRYHTP--AVSS---EHTGREIVDV   75 (146)
T ss_pred             EEEECCCCCCCCCHHHHHHHHHHHHCCCEEEEECCHHHHH----HHHHHHHCCCCCEEECH--HHHC---CCCCCCEEEE
T ss_conf             7985389999702248999999997286189977279999----99999975899467523--4313---6688841889


Q ss_pred             ECHHHHHCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCCC
Q ss_conf             656673100000000247200002512201365433203699999998513798799831653248
Q gi|254780129|r  102 INFENIPWLVKMKLDHWDFATIVVDESTKLKSFRTHQGTKQTRALGKVAFSKVKRFIELTGTPSPN  167 (220)
Q Consensus       102 ~~~~~l~~~~~~~~~~~~~~~iIiDEaH~~kn~~~~~~~k~~k~l~~~~~~~~~~~l~LTgTPi~n  167 (220)
T Consensus        76 mCHAT~t~r~l~~~~~~ny~viIMDE~H~~-DP~---SIAarG~~~~~~~~g~~a~i~mTATPPG~  137 (146)
T pfam07652        76 MCHATFTQRLLSPVRVPNYEVIIMDEAHFT-DPA---SIAARGYISTLVELGEAAAIFMTATPPGT  137 (146)
T ss_pred             ECHHHHHHHHHCCCCCCCEEEEEEECCCCC-CHH---HHHHHHHHHHHHHCCCEEEEEEECCCCCC
T ss_conf             715988889736888564479998512238-989---99988999988543865799995689998