HHsearch alignment for GI: 254780129 and conserved domain: pfam12340

>pfam12340 DUF3638 Protein of unknown function (DUF3638). This domain family is found in eukaryotes, and is approximately 230 amino acids in length. There are two conserved sequence motifs: LLE and NMG.

Probab=97.06  E-value=0.0018  Score=39.15  Aligned_cols=106  Identities=18%  Similarity=0.236  Sum_probs=62.8

Q ss_pred             CCCCCHHHHHHHHHHHH---CCCCEEEECCCCCHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHH-HHHCCCCCC
Q ss_conf             87134899999999996---79819996899988999999999997408994899723310137889999-851553460
Q gi|254780129|r    2 HLVLKPHQIVMVNWLLS---HDRCALWASMGSGKTVSVLFALSTIKILDPRPVLIIAPLRVAQYVWKDEV-ERWSAFSDM   77 (220)
Q Consensus         2 ~~~Lrp~Q~~a~~~~~~---~~~~~l~~~~G~GKT~~ai~~~~~~~~~~~~~~LIi~P~s~~~~~W~~e~-~~~~~~~~~   77 (220)
T Consensus        21 ~iliR~~Q~~va~~~i~~~~~~n~v~QlnMGeGKTsVI~Pmla~~LAdg~~Lvr~vvp~~Ll~q~-~~~L~~~lggll~r   99 (229)
T pfam12340        21 NILIRPVQVDVARAMISPSSGSNSVLQLNMGEGKTSVIVPMVAAVLADGSRLVRVIVPKPLLRQM-AQMLQSRLGGLLGR   99 (229)
T ss_pred             CCEECHHHHHHHHHHHCCCCCCCEEEHHHCCCCCCEEEHHHHHHHHCCCCCEEEEECCHHHHHHH-HHHHHHHHHHHCCC
T ss_conf             96542899999999857557887220112069962243788999974888458998268899999-99999986421377


Q ss_pred             EEEEEECCCCCC------------CCCCCCCCCEEEECHHHHH
Q ss_conf             699861121011------------2234567662786566731
Q gi|254780129|r   78 TVSSLIGSERQR------------IKALNTPAHLYIINFENIP  108 (220)
Q Consensus        78 ~~~~~~~~~~~~------------~~~~~~~~~~~i~~~~~l~  108 (220)
T Consensus       100 ~v~~lPFsR~~~~~~~~~~~~~~~~~~~~~~~GIll~~PEhil  142 (229)
T pfam12340       100 EIYHLPFSRRTPTTESEINLYRQLHEECMKEGGVLLAQPEHIL  142 (229)
T ss_pred             CEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEECCHHHH
T ss_conf             0598403476889989999999999999972987996807877