HHsearch alignment for GI: 254780129 and conserved domain: smart00382

>smart00382 AAA ATPases associated with a variety of cellular activities. AAA - ATPases associated with a variety of cellular activities. This profile/alignment only detects a fraction of this vast family. The poorly conserved N-terminal helix is missing from the alignment.

Probab=96.06  E-value=0.012  Score=34.31  Aligned_cols=39  Identities=18%  Similarity=0.095  Sum_probs=24.8

Q ss_pred             CCCEEEECCCCCHHHHHHHHHHHHHHCCCCCEEEEECCCC
Q ss_conf             9819996899988999999999997408994899723310
Q gi|254780129|r   20 DRCALWASMGSGKTVSVLFALSTIKILDPRPVLIIAPLRV   59 (220)
Q Consensus        20 ~~~~l~~~~G~GKT~~ai~~~~~~~~~~~~~~LIi~P~s~   59 (220)
T Consensus         3 ~~ill~G~~GsGKTtl~~~la~~~~~~~-~~v~~~~~~~~   41 (148)
T smart00382        3 EVILIVGPPGSGKTTLARALARELGPPG-GGVIYIDGEDI   41 (148)
T ss_pred             CEEEEECCCCHHHHHHHHHHHHHHCCCC-CCEEEEEHHHH
T ss_conf             7899999997029999999998726689-96899875998