HHsearch alignment for GI: 254780129 and conserved domain: smart00487
>smart00487 DEXDc DEAD-like helicases superfamily.
Probab=99.91 E-value=2.9e-23 Score=152.80 Aligned_cols=166 Identities=23% Similarity=0.310 Sum_probs=110.9
Q ss_pred CCCCCHHHHHHHHHHHHC-CCCEEEECCCCCHHHHHHHHHHH-HHHCCCCCEEEEECCCCCHHHHHHHHHHHCCCCC-CE
Q ss_conf 871348999999999967-98199968999889999999999-9740899489972331013788999985155346-06
Q gi|254780129|r 2 HLVLKPHQIVMVNWLLSH-DRCALWASMGSGKTVSVLFALST-IKILDPRPVLIIAPLRVAQYVWKDEVERWSAFSD-MT 78 (220)
Q Consensus 2 ~~~Lrp~Q~~a~~~~~~~-~~~~l~~~~G~GKT~~ai~~~~~-~~~~~~~~~LIi~P~s~~~~~W~~e~~~~~~~~~-~~ 78 (220)
T Consensus 6 ~~~~~~~Q~~~~~~~~~~~~~~~i~~~tGsGKT~~~~~~~~~~~~~~~~~~~li~~P~~~l~~q~~~~~~~~~~~~~~~~ 85 (201)
T smart00487 6 FEPLRPYQKEAIEALLSGLRDVILAAPTGSGKTLAALLPALEALKRGKGKRVLVLVPTRELAEQWAEELKKLGPSLGLKV 85 (201)
T ss_pred CCCCCHHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHHHHHCCCCCEEEEEECCHHHHHHHHHHHHHCCCCCEEEE
T ss_conf 99999889999999983899889989999609999999999986338997599990859999999988601021020445
Q ss_pred EEEEECCCC-CCCCCC-CCCCCEEEECHHHHHCCCCCC-CCCCCCCCCCCCHHHCCCCCCCCCHHHHHHHHHHHHHCCCC
Q ss_conf 998611210-112234-567662786566731000000-00247200002512201365433203699999998513798
Q gi|254780129|r 79 VSSLIGSER-QRIKAL-NTPAHLYIINFENIPWLVKMK-LDHWDFATIVVDESTKLKSFRTHQGTKQTRALGKVAFSKVK 155 (220)
Q Consensus 79 ~~~~~~~~~-~~~~~~-~~~~~~~i~~~~~l~~~~~~~-~~~~~~~~iIiDEaH~~kn~~~~~~~k~~k~l~~~~~~~~~ 155 (220)
T Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~i~i~t~~~l~~~~~~~~~~~~~~~~vIiDE~H~~~~~--~~~~-~~~~~~~~~-~~~~ 161 (201)
T smart00487 86 VGLYGGDSKREQLRKLESGKTDILVTTPGRLLDLLENDLLELSNVDLVILDEAHRLLDG--GFGD-QLEKLLKLL-PKNV 161 (201)
T ss_pred EEEECCCCHHHHHHHHHCCCCCEEEECHHHHHHHHHHCCCCCCCCEEEEEECHHHHHCC--CCHH-HHHHHHHHC-CCCC
T ss_conf 56524773799999997599989995589999999727545254319999896775125--7099-999999967-9999
Q ss_pred EEEEECCCCCCCCHHHH
Q ss_conf 79983165324888999
Q gi|254780129|r 156 RFIELTGTPSPNGLIDL 172 (220)
Q Consensus 156 ~~l~LTgTPi~n~~~el 172 (220)
T Consensus 162 ~~i~lSAT~~-~~~~~~ 177 (201)
T smart00487 162 QLLLLSATPP-EEIENL 177 (201)
T ss_pred CEEEECCCCC-HHHHHH
T ss_conf 7899924898-689999