HHsearch alignment for GI: 254780129 and conserved domain: smart00488
>smart00488 DEXDc2 DEAD-like helicases superfamily.
Probab=98.68 E-value=1.6e-07 Score=62.36 Aligned_cols=43 Identities=26% Similarity=0.247 Sum_probs=29.8
Q ss_pred CCCCHHHHHHHHHHH---H-CCCCEEEECCCCCHHHHHHH-HHHHHHH
Q ss_conf 713489999999999---6-79819996899988999999-9999974
Q gi|254780129|r 3 LVLKPHQIVMVNWLL---S-HDRCALWASMGSGKTVSVLF-ALSTIKI 45 (220)
Q Consensus 3 ~~Lrp~Q~~a~~~~~---~-~~~~~l~~~~G~GKT~~ai~-~~~~~~~ 45 (220)
T Consensus 7 y~py~~Q~e~m~~v~~~l~~~~~~llEaPTGtGKTlalL~~al~~~~~ 54 (289)
T smart00488 7 YEPYPIQYEFMEELKRVLDRGKIGILESPTGTGKTLSLLCLTLTWLRS 54 (289)
T ss_pred CCCCHHHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHHHHHH
T ss_conf 999989999999999999749979998999651899999999999996