RPSBLAST alignment for GI: 254780129 and conserved domain: KOG0384
>gnl|CDD|35605 KOG0384, KOG0384, KOG0384, Chromodomain-helicase DNA-binding protein [Transcription]. Length = 1373
Score = 53.1 bits (127), Expect = 6e-08
Identities = 52/196 (26%), Positives = 86/196 (43%), Gaps = 29/196 (14%)
Query: 5 LKPHQIVMVNWLL----SHDRCALWASMGSGKTVSVLFALSTIK--ILDPRPVLIIAPLR 58
L+ +Q+ +NWLL + C L MG GKTV + LS + + P L++ PL
Sbjct: 371 LRDYQLEGLNWLLYSWYKRNNCILADEMGLGKTVQTITFLSYLFHSLQIHGPFLVVVPLS 430
Query: 59 VAQYVWKDEVERWSAFSDMTVSSLIGSERQR--------IKALNTPA---HLYIINFENI 107
W+ E E W+ DM V G+ R + NT + + +E +
Sbjct: 431 TIT-AWEREFETWT---DMNVIVYHGNLESRQLIRQYEFYHSSNTKKLKFNALLTTYEIV 486
Query: 108 PWLVKMKLDHWDFATIVVDESTKLKSFRTHQGTKQTRALGKVAFSKVKRFIELTGTPSPN 167
K +L + ++VDE+ +LK+ +++ + K+ + +TGTP N
Sbjct: 487 -LKDKAELSKIPWRYLLVDEAHRLKN-------DESKLYESLNQFKMNHRLLITGTPLQN 538
Query: 168 GLIDLWGQIWFLDKGK 183
L +LW + FL GK
Sbjct: 539 SLKELWSLLHFLMPGK 554