HHsearch alignment for GI: 254780130 and conserved domain: KOG1000
>KOG1000 consensus.
Probab=99.94 E-value=2.4e-27 Score=170.78 Aligned_cols=136 Identities=23% Similarity=0.307 Sum_probs=117.6
Q ss_pred HHHHHHHHHHHHH------CCCCCEEEHHHHHHHHHHHHHHH----------HCCCCHHHHHHHHHHHH-CCCCCEEEEC
Q ss_conf 2343349999861------48997110578999999987653----------04778234899999972-7898699972
Q gi|254780130|r 53 DEKIKALEVIIEK------ANAAPIIVAYHFNSDLARLQKAF----------PQGRTLDKDPCTIQEWN-EGKIPLLFAH 115 (205)
Q Consensus 53 ~~Kl~~l~~ii~~------~~~~kviVf~~f~~~l~~l~~~~----------~~~~~~~~r~~~i~~f~-~~~~~Vll~~ 115 (205)
T Consensus 471 iaK~~av~eyi~~~~~l~d~~~~KflVFaHH~~vLd~Iq~~~~~r~vg~IRIDGst~s~~R~ll~qsFQ~seev~VAvls 550 (689)
T KOG1000 471 IAKAAAVCEYILENYFLPDAPPRKFLVFAHHQIVLDTIQVEVNKRKVGSIRIDGSTPSHRRTLLCQSFQTSEEVRVAVLS 550 (689)
T ss_pred CCCCHHHHHHHHHCCCCCCCCCCEEEEEEHHHHHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHCCCCCEEEEEEE
T ss_conf 10208899999747444568873599994148799999999987479758856989843478999873146314799999
Q ss_pred HHHHHHHHHHHHHCCEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEECCCHHHHHHHHHHHHHHHHHHH
Q ss_conf 1443233224320675897268999888022555576665420265775399999838895899999999999999999
Q gi|254780130|r 116 PASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 (205)
Q Consensus 116 ~~a~g~GlnL~~a~~~vI~~~~~~n~~~~~Qa~~Ri~~~r~hR~GQ~~~v~v~~l~~~~tiEe~i~~~l~~K~~~~~~~ 194 (205)
T Consensus 551 ItA~gvGLt~t-Aa~~VVFaEL~wnPgvLlQAEDRa-----HRiGQkssV~v~ylvAKgT~Ddy~Wp~l~~KL~vl~s~ 623 (689)
T KOG1000 551 ITAAGVGLTLT-AASVVVFAELHWNPGVLLQAEDRA-----HRIGQKSSVFVQYLVAKGTADDYMWPMLQQKLDVLGSV 623 (689)
T ss_pred EEECCCCEEEE-CCCEEEEEEECCCCCEEEECHHHH-----HHCCCCCEEEEEEEEECCCHHHHHHHHHHHHHHHHHHC
T ss_conf 86314441465-132589998237875477514656-----64056651138999954845777789999998788662