HHsearch alignment for GI: 254780130 and conserved domain: PRK02362
>PRK02362 ski2-like helicase; Provisional.
Probab=97.95 E-value=0.00022 Score=43.84 Aligned_cols=76 Identities=18% Similarity=0.225 Sum_probs=53.5
Q ss_pred CCCHHHHHHHHHHHHCCCCCEEEECHHHHHHHHHHHHHCCEEEEECC----------CCCHHHHHHHHHHHHHHHHHCCC
Q ss_conf 77823489999997278986999721443233224320675897268----------99988802255557666542026
Q gi|254780130|r 91 GRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSL----------WWDLEEHQQMIERIGVTRQRQAG 160 (205)
Q Consensus 91 ~~~~~~r~~~i~~f~~~~~~Vll~~~~a~g~GlnL~~a~~~vI~~~~----------~~n~~~~~Qa~~Ri~~~r~hR~G 160 (205)
T Consensus 312 GL~~~~R~lVE~~Fr~g~Ikvl~aTsT-LA~GVNLP--Ar~VIi~~~~~~~~~~g~~~l~~~e~~QM~GR-----AGRpg 383 (736)
T PRK02362 312 GLSREHRELVEEGFRDGLIKVISSTPT-LAAGLNLP--ARRVIIRDYRRYDSGAGMQPIPVLEYHQMAGR-----AGRPR 383 (736)
T ss_pred CCCHHHHHHHHHHHHCCCCCEEEECCH-HHCCCCCC--EEEEEEECCEEECCCCCCEECCHHHHHHHHHH-----CCCCC
T ss_conf 999899999999998799838972516-65055785--26999804367369888336889999999852-----48998
Q ss_pred CCCCEEEEEEEECCC
Q ss_conf 577539999983889
Q gi|254780130|r 161 FKRAVFVYYLIAQNT 175 (205)
Q Consensus 161 Q~~~v~v~~l~~~~t 175 (205)
T Consensus 384 ~D~~G~ai-li~~~~ 397 (736)
T PRK02362 384 LDPYGEAV-LLAKSY 397 (736)
T ss_pred CCCCCEEE-EEECCH
T ss_conf 89886299-996782