HHsearch alignment for GI: 254780130 and conserved domain: PRK11057
>PRK11057 ATP-dependent DNA helicase RecQ; Provisional.
Probab=99.04 E-value=2.1e-09 Score=71.60 Aligned_cols=109 Identities=14% Similarity=0.246 Sum_probs=92.1
Q ss_pred HHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHH----------HCCCCHHHHHHHHHHHHCCCCCEEEECHHHHHHHH
Q ss_conf 34334999986148997110578999999987653----------04778234899999972789869997214432332
Q gi|254780130|r 54 EKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAF----------PQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGL 123 (205)
Q Consensus 54 ~Kl~~l~~ii~~~~~~kviVf~~f~~~l~~l~~~~----------~~~~~~~~r~~~i~~f~~~~~~Vll~~~~a~g~Gl 123 (205)
T Consensus 222 ~~~~~~~~~~~~~~~~sgIIYc~trk~~e~la~~L~~~G~~~~~YHagl~~~~R~~~q~~f~~~~~~vivAT-~AFGMGI 300 (607)
T PRK11057 222 KPLDQLMRYVQEQRGKSGIIYCNSRAKVEDTAARLQSRGISAAAYHAGLDNDVRADVQEAFQRDDLQIVVAT-VAFGMGI 300 (607)
T ss_pred CHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHHHCCCCEEECCCCCCHHHHHHHHHHHHCCCCCEEEEE-HHHHCCC
T ss_conf 739999999870689977999692899999999998579754530589997899999998756887589975-0110576
Q ss_pred HHHHHCCEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEE
Q ss_conf 2432067589726899988802255557666542026577539999
Q gi|254780130|r 124 NLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYY 169 (205)
Q Consensus 124 nL~~a~~~vI~~~~~~n~~~~~Qa~~Ri~~~r~hR~GQ~~~v~v~~ 169 (205)
T Consensus 301 dk~d-VR~ViH~~~P~s~e~yyQE~GR-----AGRDG~~a~c~l~y 340 (607)
T PRK11057 301 NKPN-VRFVVHFDIPRNIESYYQETGR-----AGRDGLPAEAMLFY 340 (607)
T ss_pred CCCC-CCEEEECCCCCCHHHHHHHHHH-----CCCCCCCCEEEEEE
T ss_conf 7777-6679977899999999998863-----52589854189985