HHsearch alignment for GI: 254780130 and conserved domain: PTZ00110
>PTZ00110 helicase; Provisional.
Probab=99.17 E-value=1.9e-10 Score=77.32 Aligned_cols=116 Identities=20% Similarity=0.363 Sum_probs=95.1
Q ss_pred CHHHHHHHHHHHHHC-CCCCEEEHHHHHHHHHHHHHHHH----------CCCCHHHHHHHHHHHHCCCCCEEEECHHHHH
Q ss_conf 723433499998614-89971105789999999876530----------4778234899999972789869997214432
Q gi|254780130|r 52 HDEKIKALEVIIEKA-NAAPIIVAYHFNSDLARLQKAFP----------QGRTLDKDPCTIQEWNEGKIPLLFAHPASCG 120 (205)
Q Consensus 52 ~~~Kl~~l~~ii~~~-~~~kviVf~~f~~~l~~l~~~~~----------~~~~~~~r~~~i~~f~~~~~~Vll~~~~a~g 120 (205)
T Consensus 411 ~~eK~~~L~~lL~~~~~~~kvIIFvnTK~~ad~L~~~L~~~G~~a~~LHGd~~Q~eR~~~L~~Fr~G~~~ILVAT-DVAA 489 (602)
T PTZ00110 411 EHEKRAKLKELLGQIMDGGKILIFSETKKGADTLTKELRLDGWPALCIHGDKKQEERTWVLNEFKTGKHPIMIAT-DVAS 489 (602)
T ss_pred HHHHHHHHHHHHHHCCCCCCEEEEECCHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHCCCCCEEEEC-CHHH
T ss_conf 188999999999852789968999297389999999998679957982088999999999999976999889882-2233
Q ss_pred HHHHHHHHCCEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEECCCH
Q ss_conf 33224320675897268999888022555576665420265775399999838895
Q gi|254780130|r 121 HGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTI 176 (205)
Q Consensus 121 ~GlnL~~a~~~vI~~~~~~n~~~~~Qa~~Ri~~~r~hR~GQ~~~v~v~~l~~~~ti 176 (205)
T Consensus 490 RGLDI~-dV~~VINYD~P~~~edYVHRIGRTG-----RAG~kG~--A~TF~Tpd~~ 537 (602)
T PTZ00110 490 RGLDVR-DVKYVINFDFPNQIEDYVHRIGRTG-----RAGAKGA--SYTFLTPDKY 537 (602)
T ss_pred CCCCCC-CCCEEEEECCCCCCCCCCCCCCCCC-----CCCCCEE--EEEEECCCCH
T ss_conf 155515-7987999589798022101356150-----6899316--9999777707