HHsearch results for GI: 254780130 and protein with PDBid: 1fuk_A
>1fuk_A Eukaryotic initiation factor 4A; helicase, DEAD-box protein, translation; 1.75A {Saccharomyces cerevisiae} SCOP: c.37.1.19
Probab=99.65 E-value=9.1e-16 Score=105.58 Aligned_cols=122 Identities=13% Similarity=0.211 Sum_probs=98.8
Q ss_pred CHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHH----------CCCCHHHHHHHHHHHHCCCCCEEEECHHHHHH
Q ss_conf 72343349999861489971105789999999876530----------47782348999999727898699972144323
Q gi|254780130|r 52 HDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFP----------QGRTLDKDPCTIQEWNEGKIPLLFAHPASCGH 121 (205)
Q Consensus 52 ~~~Kl~~l~~ii~~~~~~kviVf~~f~~~l~~l~~~~~----------~~~~~~~r~~~i~~f~~~~~~Vll~~~~a~g~ 121 (205)
.+.|++.|.++++..++.++||||+.+...+.+...+. +.....+|....++|++++.++++++ .+++.
T Consensus 14 ~~~Kl~~L~~ll~~~~~~k~iIF~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~r~~~~~~f~~~~~~iLv~T-d~~~r 92 (165)
T 1fuk_A 14 EEYKYECLTDLYDSISVTQAVIFCNTRRKVEELTTKLRNDKFTVSAIYSDLPQQERDTIMKEFRSGSSRILIST-DLLAR 92 (165)
T ss_dssp GGGHHHHHHHHHHHTTCSCEEEEESSHHHHHHHHHHHHHTTCCEEEECTTSCHHHHHHHHHHHHTTSCSEEEEE-GGGTT
T ss_pred CHHHHHHHHHHHHHCCCCCEEEEEEEHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHCCCCCEEEEE-HHHHC
T ss_conf 18899999999984799839999917677999999998579978999699999999999999853887557731-25436
Q ss_pred HHHHHHHCCEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEECCCHHHHHHHHH
Q ss_conf 322432067589726899988802255557666542026577539999983889589999999
Q gi|254780130|r 122 GLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRL 184 (205)
Q Consensus 122 GlnL~~a~~~vI~~~~~~n~~~~~Qa~~Ri~~~r~hR~GQ~~~v~v~~l~~~~tiEe~i~~~l 184 (205)
|+|++ .++++|+||+||||..|.|..||. .|.|+...+ +.+++.+ |...+..+
T Consensus 93 GiDi~-~v~~VI~~d~P~~~~~yiqR~GR~-----gR~g~~g~~--i~~~~~~--d~~~~~~i 145 (165)
T 1fuk_A 93 GIDVQ-QVSLVINYDLPANKENYIHRIGRG-----GRFGRKGVA--INFVTNE--DVGAMREL 145 (165)
T ss_dssp TCCCC-SCSEEEESSCCSSGGGGGGSSCSC-----C-----CEE--EEEEETT--THHHHHHH
T ss_pred CCCCC-CCCEEEEECCCCCHHHHHHHHCCC-----CCCCCCEEE--EEEECHH--HHHHHHHH
T ss_conf 66789-998899988997899998987035-----658995599--9985589--99999999