HHsearch results for GI: 254780130 and protein with PDBid: 1nkt_A
>1nkt_A Preprotein translocase SECA 1 subunit; preprotein translocation, ATPase, transmembrane transport, helicase-like motor domain; HET: ADP; 2.60A {Mycobacterium tuberculosis} SCOP: a.162.1.1 a.172.1.1 c.37.1.19 c.37.1.19 PDB: 1nl3_A
Probab=96.23 E-value=0.025 Score=31.20 Aligned_cols=109 Identities=17% Similarity=0.186 Sum_probs=72.2
Q ss_pred HHHHHHHHHHHHH--CCCCCEEEHHHHHHHHHHHHHHHHCCCC--------HHHHHHHHHHHHCCC-CCEEEECHHHHHH
Q ss_conf 2343349999861--4899711057899999998765304778--------234899999972789-8699972144323
Q gi|254780130|r 53 DEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRT--------LDKDPCTIQEWNEGK-IPLLFAHPASCGH 121 (205)
Q Consensus 53 ~~Kl~~l~~ii~~--~~~~kviVf~~f~~~l~~l~~~~~~~~~--------~~~r~~~i~~f~~~~-~~Vll~~~~a~g~ 121 (205)
..|+.++.+-+.+ ..|+||+|+|......+.|...|..... ...++..+-. +.|. -.|.+++ ..||-
T Consensus 443 ~~k~~aii~~i~~~~~~grPVLVgt~si~~se~ls~~L~~~~i~h~vLnak~~e~Ea~IIa-~AG~~G~VTIAT-NMAGR 520 (922)
T 1nkt_A 443 EAKYIAVVDDVAERYAKGQPVLIGTTSVERSEYLSRQFTKRRIPHNVLNAKYHEQEATIIA-VAGRRGGVTVAT-NMAGR 520 (922)
T ss_dssp HHHHHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHHHHHTTCCCEEECSSCHHHHHHHHH-TTTSTTCEEEEE-TTCST
T ss_pred HHHHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHCCCCCEECCCCCHHHHHHHHH-HCCCCCEEEEEE-CHHCC
T ss_conf 9999999999999996499779974229889999999997699402213002165676787-079987499970-02138
Q ss_pred HHHHH---------------------------------------------------HHCCEEEEECCCCCHHHHHHHHHH
Q ss_conf 32243---------------------------------------------------206758972689998880225555
Q gi|254780130|r 122 GLNLQ---------------------------------------------------YGGNILVFFSLWWDLEEHQQMIER 150 (205)
Q Consensus 122 GlnL~---------------------------------------------------~a~~~vI~~~~~~n~~~~~Qa~~R 150 (205)
|.+.. .+.=+||--.++-| .++++
T Consensus 521 GTDI~Lgg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~~GGLhVIgTerhes-----rRiD~ 595 (922)
T 1nkt_A 521 GTDIVLGGNVDFLTDQRLRERGLDPVETPEEYEAAWHSELPIVKEEASKEAKEVIEAGGLYVLGTERHES-----RRIDN 595 (922)
T ss_dssp TCCCCTTCCHHHHHHHHHHHTTCCTTTSHHHHHHHHHHHHHHHHHHTTHHHHHHHHTTSEEEEECSCCSS-----HHHHH
T ss_pred CCCEECCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCH-----HHHHH
T ss_conf 7570158862022444443203564358377998887777788898887667787539828995045613-----77887
Q ss_pred HHHHHHHCCCCCCCEEEE
Q ss_conf 766654202657753999
Q gi|254780130|r 151 IGVTRQRQAGFKRAVFVY 168 (205)
Q Consensus 151 i~~~r~hR~GQ~~~v~v~ 168 (205)
+.++|+-|=|+.-....|
T Consensus 596 QlrGRagRQGdpGss~f~ 613 (922)
T 1nkt_A 596 QLRGRSGRQGDPGESRFY 613 (922)
T ss_dssp HHHHTSSGGGCCEEEEEE
T ss_pred HHCCCCCCCCCCCCEEEE
T ss_conf 750532479999725998