HHsearch results for GI: 254780130 and protein with PDBid: 2fsf_A

>2fsf_A Preprotein translocase SECA subunit; ATPase, DNA-RNA helicase, protein translocation, protein transport; 2.00A {Escherichia coli} PDB: 2fsg_A* 2fsh_A* 2fsi_A* 2vda_A 3bxz_A*
Probab=96.38  E-value=0.015  Score=32.45  Aligned_cols=114  Identities=18%  Similarity=0.212  Sum_probs=72.9

Q ss_pred             HHHHHHHHHHHHH--CCCCCEEEHHHHHHHHHHHHHHHHCCCC--------HHHHHHHHHHHHCCC-CCEEEECHHHHHH
Q ss_conf             2343349999861--4899711057899999998765304778--------234899999972789-8699972144323
Q gi|254780130|r   53 DEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRT--------LDKDPCTIQEWNEGK-IPLLFAHPASCGH  121 (205)
Q Consensus        53 ~~Kl~~l~~ii~~--~~~~kviVf~~f~~~l~~l~~~~~~~~~--------~~~r~~~i~~f~~~~-~~Vll~~~~a~g~  121 (205)
                      ..|..++.+-+..  ..|+||+|.+.....-+.|.+.|.....        ...++..+-. +.|. -.|.+++ ..||-
T Consensus       424 ~~k~~ai~~ei~~~~~~grpVLvgt~sv~~se~ls~~L~~~~i~h~vLnak~~~~Ea~Iia-~AG~~g~VTIAT-NMAGR  501 (853)
T 2fsf_A          424 AEKIQAIIEDIKERTAKGQPVLVGTISIEKSELVSNELTKAGIKHNVLNAKFHANEAAIVA-QAGYPAAVTIAT-NMAGR  501 (853)
T ss_dssp             HHHHHHHHHHHHHHHTTTCCEEEEESSHHHHHHHHHHHHHTTCCCEECCTTCHHHHHHHHH-TTTSTTCEEEEE-SCCSS
T ss_pred             HHHHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHCCCHHHHHHCCCHHHHHHHHH-HCCCCCCEEEEC-CCCCC
T ss_conf             7889999999999997189779984249879999999987486076763233065899998-458999779841-10147


Q ss_pred             HHHHHH------------------------------------HCCEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCE
Q ss_conf             322432------------------------------------06758972689998880225555766654202657753
Q gi|254780130|r  122 GLNLQY------------------------------------GGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV  165 (205)
Q Consensus       122 GlnL~~------------------------------------a~~~vI~~~~~~n~~~~~Qa~~Ri~~~r~hR~GQ~~~v  165 (205)
                      |.+..-                                    +.=+||--.++-|     .+++++.++|+-|-|..-..
T Consensus       502 GTDIkLg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~~GGLhVi~Ter~es-----~Rid~QlrGR~gRQGdpGss  576 (853)
T 2fsf_A          502 GTDIVLGGSWQAEVAALENPTAEQIEKIKADWQVRHDAVLEAGGLHIIGTERHES-----RRIDNQLRGRSGRQGDAGSS  576 (853)
T ss_dssp             CSCCCTTCCHHHHHHHCSSCCSSHHHHHHHHHHHHHHHHHHTTSEEEEESSCCSS-----HHHHHHHHTTSSGGGCCEEE
T ss_pred             CCCCCCCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCC-----HHHHHHHCCCCCCCCCCCCE
T ss_conf             7575467751012210248208899999999998765566349828996576652-----26777751610026999850


Q ss_pred             EEEEEEECC
Q ss_conf             999998388
Q gi|254780130|r  166 FVYYLIAQN  174 (205)
Q Consensus       166 ~v~~l~~~~  174 (205)
                      ..| +-.+|
T Consensus       577 ~f~-lsleD  584 (853)
T 2fsf_A          577 RFY-LSMED  584 (853)
T ss_dssp             EEE-EETTS
T ss_pred             EEE-EECCH
T ss_conf             577-65661