HHsearch results for GI: 254780130 and protein with PDBid: 2fwr_A
>2fwr_A DNA repair protein RAD25; DNA unwinding, XPB, DNA binding protein; HET: DNA; 2.60A {Archaeoglobus fulgidus} SCOP: c.37.1.19 c.37.1.19 PDB: 2fzl_A*
Probab=99.79 E-value=9.5e-20 Score=127.60 Aligned_cols=125 Identities=20% Similarity=0.272 Sum_probs=108.0
Q ss_pred CHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHH-----CCCCHHHHHHHHHHHHCCCCCEEEECHHHHHHHHHHH
Q ss_conf 72343349999861489971105789999999876530-----4778234899999972789869997214432332243
Q gi|254780130|r 52 HDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFP-----QGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQ 126 (205)
Q Consensus 52 ~~~Kl~~l~~ii~~~~~~kviVf~~f~~~l~~l~~~~~-----~~~~~~~r~~~i~~f~~~~~~Vll~~~~a~g~GlnL~ 126 (205)
...|+..+.++++...+.+++||+.+.+.++.+...|. +.....+|+.+++.|++++.+|++++ .++++|+|++
T Consensus 333 ~~~k~~~l~~ll~~~~~~~~lvf~~~~~~~~~i~~~~~~~~i~g~~~~~eR~~il~~F~~g~~~vLv~t-~~l~~GiDip 411 (472)
T 2fwr_A 333 SKNKIRKLREILERHRKDKIIIFTRHNELVYRISKVFLIPAITHRTSREEREEILEGFRTGRFRAIVSS-QVLDEGIDVP 411 (472)
T ss_dssp CSHHHHHHHHHHHHTSSSCBCCBCSCHHHHHHHHHHTTCCBCCSSSCSHHHHTHHHHHHHSSCSBCBCS-SCCCSSSCSC
T ss_pred HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCEECCCCCHHHHHHHHHHHHCCCCCEEEEC-CHHHCCCCCC
T ss_conf 488999999998741201466776579999976543044300378999999999999976999799880-2554152832
Q ss_pred HHCCEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCC-CCEEEEEEEECCCHHHHHHHH
Q ss_conf 206758972689998880225555766654202657-753999998388958999999
Q gi|254780130|r 127 YGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFK-RAVFVYYLIAQNTIDELVLQR 183 (205)
Q Consensus 127 ~a~~~vI~~~~~~n~~~~~Qa~~Ri~~~r~hR~GQ~-~~v~v~~l~~~~tiEe~i~~~ 183 (205)
. ++++|+++++||+..+.|++||+ +|.||. +.+.+|.|++++|+|+...++
T Consensus 412 ~-~~~vI~~~~~~s~~~~~Q~~GR~-----~R~~~~k~~~~vy~~v~~~t~e~~~~~r 463 (472)
T 2fwr_A 412 D-ANVGVIMSGSGSAREYIQRLGRI-----LRPSKGKKEAVLYELISRGTGEVNTARR 463 (472)
T ss_dssp C-BSEEEEECCSSCCHHHHHHHHHS-----BCCCTTTCCEEEEEEEECSCC-------
T ss_pred C-CCEEEEECCCCCHHHHHHHHHCC-----CCCCCCCCEEEEEEEECCCCHHHHHHHH
T ss_conf 3-99899968998989999998738-----8899999649999997799879999999