HHsearch results for GI: 254780130 and protein with PDBid: 2vl7_A
>2vl7_A XPD; helicase, unknown function; 2.25A {Sulfolobus tokodaii}
Probab=94.78 E-value=0.095 Score=28.01 Aligned_cols=81 Identities=15% Similarity=0.158 Sum_probs=46.0
Q ss_pred HHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHCCCC-----HHHHHHHHHHHHCCCCCEEEECHHHHHHHHHHHH---HCC
Q ss_conf 99998614899711057899999998765304778-----2348999999727898699972144323322432---067
Q gi|254780130|r 59 LEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRT-----LDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQY---GGN 130 (205)
Q Consensus 59 l~~ii~~~~~~kviVf~~f~~~l~~l~~~~~~~~~-----~~~r~~~i~~f~~~~~~Vll~~~~a~g~GlnL~~---a~~ 130 (205)
+.+++...+|. ++||..-...++.+.+.+.+... .+......++|.+++.-+|.+...+..+|++|.. .+.
T Consensus 376 i~~~~~~~~~~-~lvlf~S~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~v~~gs~~EGvD~~g~~~~~r 454 (540)
T 2vl7_A 376 LKRIYENSSKS-VLVFFPSYEMLESVRIHLSGIPVIEENKKTRHEEVLELMKTGKYLVMLVMRAKESEGVEFREKENLFE 454 (540)
T ss_dssp HHHHHHTCSSE-EEEEESCHHHHHHHHTTCTTSCEEESTTTCCHHHHHHHHHTSCCEEEEEC---------------CEE
T ss_pred HHHHHHHCCCC-EEEECCCHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHCCCCEEEEEECCEEECCCEECCCCCCEE
T ss_conf 99999846787-69975869999999999669957996885449999999846995899973763606812089988563
Q ss_pred EEEEECCCCC
Q ss_conf 5897268999
Q gi|254780130|r 131 ILVFFSLWWD 140 (205)
Q Consensus 131 ~vI~~~~~~n 140 (205)
.+|...+||-
T Consensus 455 ~vii~~lPf~ 464 (540)
T 2vl7_A 455 SLVLAGLPYP 464 (540)
T ss_dssp EEEEESCCCC
T ss_pred EEEEECCCCC
T ss_conf 8999788989