HHsearch results for GI: 254780130 and protein with PDBid: 3eaq_A
>3eaq_A Heat resistant RNA dependent ATPase; DEAD box RNA helicase, dimer, ATP-binding, helicase, hydrolase, nucleotide-binding; 2.30A {Thermus thermophilus} PDB: 3ear_A 3eas_A
Probab=99.78 E-value=1.5e-18 Score=120.96 Aligned_cols=125 Identities=14% Similarity=0.197 Sum_probs=101.2
Q ss_pred CHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHH----------HCCCCHHHHHHHHHHHHCCCCCEEEECHHHHHH
Q ss_conf 7234334999986148997110578999999987653----------047782348999999727898699972144323
Q gi|254780130|r 52 HDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAF----------PQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGH 121 (205)
Q Consensus 52 ~~~Kl~~l~~ii~~~~~~kviVf~~f~~~l~~l~~~~----------~~~~~~~~r~~~i~~f~~~~~~Vll~~~~a~g~ 121 (205)
...|++.|.+++....+.++||||+++...+.|...| .++.+...|..+++.|++|++++++++ .+++.
T Consensus 15 ~~~kl~~L~~ll~~~~~~k~iIF~~s~~~~~~l~~~L~~~g~~~~~ihg~~~~~~R~~~~~~F~~g~~~vlv~T-~~~~~ 93 (212)
T 3eaq_A 15 VRGRLEVLSDLLYVASPDRAMVFTRTKAETEEIAQGLLRLGHPAQALHGDLSQGERERVLGAFRQGEVRVLVAT-DVAAR 93 (212)
T ss_dssp TTSHHHHHHHHHHHHCCSCEEEECSSHHHHHHHHHHHHHHTCCEEEECSSSCHHHHHHHHHHHHSSSCCEEEEC-TTTTC
T ss_pred HHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEEC-HHHHC
T ss_conf 87699999999985798979999797899999999998689978998799999999999988634875478730-13432
Q ss_pred HHHHHHHCCEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEECCCHHHHHHHHHHHH
Q ss_conf 322432067589726899988802255557666542026577539999983889589999999999
Q gi|254780130|r 122 GLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTK 187 (205)
Q Consensus 122 GlnL~~a~~~vI~~~~~~n~~~~~Qa~~Ri~~~r~hR~GQ~~~v~v~~l~~~~tiEe~i~~~l~~K 187 (205)
|+|++ .++++|+|++||||..+.|++||. +|.||...| +.++.. .|...++.+.+.
T Consensus 94 Gid~~-~~~~Vi~~d~p~~~~~~~qr~GR~-----gR~g~~~~~--i~l~~~--~d~~~~~~i~~~ 149 (212)
T 3eaq_A 94 GLDIP-QVDLVVHYRLPDRAEAYQHRSGRT-----GRAGRGGRV--VLLYGP--RERRDVEALERA 149 (212)
T ss_dssp SSSCC-CBSEEEESSCCSSHHHHHHHHTTB-----CCCC--BEE--EEEECG--GGHHHHHHHHHH
T ss_pred CCCCC-CCCHHHHCCCCCCHHHHHHHHCHH-----CCCCCCCEE--EEEECH--HHHHHHHHHHHH
T ss_conf 43202-641554416999988999996650-----347789879--999784--589999999999