HHsearch results for GI: 254780130 and protein with PDBid: 3fht_A
>3fht_A ATP-dependent RNA helicase DDX19B; DBP5, DEAD-box helicase, RNA dependent ATPase, mRNA export, nucleocytoplasmic transport, NUP214, CAN; HET: ANP; 2.20A {Homo sapiens} PDB: 3ews_A* 3g0h_A* 3fhc_B
Probab=99.32 E-value=1.4e-11 Score=82.45 Aligned_cols=124 Identities=20% Similarity=0.333 Sum_probs=94.7
Q ss_pred HHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHH----------CCCCHHHHHHHHHHHHCCCCCEEEECHHHHHHH
Q ss_conf 2343349999861489971105789999999876530----------477823489999997278986999721443233
Q gi|254780130|r 53 DEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFP----------QGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHG 122 (205)
Q Consensus 53 ~~Kl~~l~~ii~~~~~~kviVf~~f~~~l~~l~~~~~----------~~~~~~~r~~~i~~f~~~~~~Vll~~~~a~g~G 122 (205)
..|++.|.++++.....++||||+-....+.+...|. ++.....|..+.+.|.+|+.+|++++ .+.+.|
T Consensus 251 ~~k~~~l~~l~~~~~~~~~iIF~~s~~~~~~~~~~L~~~g~~~~~~h~~~~~~~R~~~l~~f~~g~~~iLvaT-~~~~~G 329 (412)
T 3fht_A 251 DEKFQALCNLYGAITIAQAMIFCHTRKTASWLAAELSKEGHQVALLSGEMMVEQRAAVIERFREGKEKVLVTT-NVCARG 329 (412)
T ss_dssp HHHHHHHHHHHHHHSSSEEEEECSSHHHHHHHHHHHHHTTCCCEEECTTSCHHHHHHHHHHHHTTSCSEEEEC-GGGTSS
T ss_pred HHHHHHHHHHHHHCCCCCEEEEEEECHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEECC-CCEECC
T ss_conf 8899999999984677737999973126899999998559972012256468999999999867986188603-420135
Q ss_pred HHHHHHCCEEEEECCCC------CHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEECCCHHHHHHHHHHH
Q ss_conf 22432067589726899------98880225555766654202657753999998388958999999999
Q gi|254780130|r 123 LNLQYGGNILVFFSLWW------DLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRT 186 (205)
Q Consensus 123 lnL~~a~~~vI~~~~~~------n~~~~~Qa~~Ri~~~r~hR~GQ~~~v~v~~l~~~~tiEe~i~~~l~~ 186 (205)
+|+. ..++||+|++|. ++..|.|..||.. |.|+.- .++.|++.. -|..+.+.+.+
T Consensus 330 iDip-~v~~VI~~d~P~~~~~~~s~~~yiqr~GR~g-----R~g~~G--~~i~lv~~~-~~~~~~~~i~~ 390 (412)
T 3fht_A 330 IDVE-QVSVVINFDLPVDKDGNPDNETYLHRIGRTG-----RFGKRG--LAVNMVDSK-HSMNILNRIQE 390 (412)
T ss_dssp CCCT-TEEEEEESSCCBCSSSSBCHHHHHHHHTTSS-----CTTCCE--EEEEEECSH-HHHHHHHHHHH
T ss_pred CCCC-CCCEEEEECCCCCCCCCCCHHHEEECCCCCC-----CCCCCE--EEEEEECCH-HHHHHHHHHHH
T ss_conf 6777-8888999789987455667111422032256-----799955--999998364-27999999999