HHSEARCH alignment of GI: 254780130 and SCOP domain: d1gm5a4

Alignment
>d1gm5a4 c.37.1.19 (A:550-755) RecG helicase domain {Thermotoga maritima [TaxId: 2336]}
Probab=98.18  E-value=1.3e-07  Score=59.18  Aligned_cols=72  Identities=15%  Similarity=0.291  Sum_probs=56.9

Q ss_pred             HCCCCHHHHHHHHHHHHCCCCCEEEECHHHHHHHHHHHHHCCE-EEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEE
Q ss_conf             0477823489999997278986999721443233224320675-897268999888022555576665420265775399
Q gi|254780130|r   89 PQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNI-LVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFV  167 (205)
Q Consensus        89 ~~~~~~~~r~~~i~~f~~~~~~Vll~~~~a~g~GlnL~~a~~~-vI~~~~~~n~~~~~Qa~~Ri~~~r~hR~GQ~~~v~v  167 (205)
                      .+..+.++++.++..|.+++++||++| ....+|||... +++ +|+..+.|..+.+.|-.||+     -|-|++.-|+.
T Consensus        71 HG~m~~~eke~~m~~F~~g~~~iLVaT-tViE~GIDip~-a~~iii~~a~~fglsqlhQlrGRv-----GR~~~~~~~~l  143 (206)
T d1gm5a4          71 HGRLSQEEKDRVMLEFAEGRYDILVST-TVIEVGIDVPR-ANVMVIENPERFGLAQLHQLRGRV-----GRGGQEAYCFL  143 (206)
T ss_dssp             CSSSCCSCSHHHHHHHTTTSSSBCCCS-SCCCSCSCCTT-CCEEEBCSCSSSCTTHHHHHHHTS-----CCSSTTCEEEC
T ss_pred             EECCCHHHHHHHHHHHHCCCEEEEEEE-HHHHCCCCCCC-CCEEEEECCCCCCHHHHHHHHHHE-----EECCCCCEEEE
T ss_conf             603659999999999977987899970-24310455267-848999804886377887652021-----21212540576


SCOP domain information

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Tandem AAA-ATPase domain
domain: RecG helicase domain
species: Thermotoga maritima [TaxId: 2336]