Probab=98.29 E-value=3.4e-08 Score=62.34 Aligned_cols=98 Identities=11% Similarity=-0.006 Sum_probs=68.0 Q ss_pred HHCCCCCEEEHHHHHHHHHHHHHHHHCCCC----HHHHHHHHHHHHCCCCCEEEECHHHHHHHHHHHHHCCEEEE----E Q ss_conf 614899711057899999998765304778----23489999997278986999721443233224320675897----2 Q gi|254780130|r 64 EKANAAPIIVAYHFNSDLARLQKAFPQGRT----LDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVF----F 135 (205) Q Consensus 64 ~~~~~~kviVf~~f~~~l~~l~~~~~~~~~----~~~r~~~i~~f~~~~~~Vll~~~~a~g~GlnL~~a~~~vI~----~ 135 (205) +...+.++||||+-+...+.|...|..... .. +....+.|++++.+|++++ .+++.|+|. . -..||+ | T Consensus 31 ~~~~~~k~IVFc~t~~~ae~la~~L~~~G~~~~~~H-~~~~~~~~~~~~~~vlvaT-d~~~~GiD~-~-v~~Vi~~~~~~ 106 (138) T d1jr6a_ 31 EVIKGGRHLIFCHSKKKCDELAAKLVALGINAVAYY-RGLDVSVIPTNGDVVVVAT-DALMTGFTG-D-FDSVIDCNTSD 106 (138) T ss_dssp HHHTTSCEEEECSCHHHHHHHHHHHHHHTCEEEEEC-TTCCSCCCTTSSCEEEEES-SSSCSSSCC-C-BSEEEECSEET T ss_pred HHCCCCCEEEEECCHHHHHHHHHHHHCCCCCHHHHH-CCCHHHHHHHHHCCEEEHH-HHHHHCCCC-C-CCEEEEEEECC T ss_conf 410899899990958999999999835263203342-3530544323311214106-888702543-3-46177777647 Q ss_pred CCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEECC Q ss_conf 689998880225555766654202657753999998388 Q gi|254780130|r 136 SLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQN 174 (205) Q Consensus 136 ~~~~n~~~~~Qa~~Ri~~~r~hR~GQ~~~v~v~~l~~~~ 174 (205) ++|++++.|.|.+||- -| |+.- +|.+++.+ T Consensus 107 ~~P~~~~~y~qr~GR~-----gR-g~~G---~~~~i~~~ 136 (138) T d1jr6a_ 107 GKPQDAVSRTQRRGRT-----GR-GKPG---IYRFVAPG 136 (138) T ss_dssp TEECCHHHHHHHHTTB-----CS-SSCE---EEEECCSS T ss_pred CCCCCHHHHHHHHCCC-----CC-CCCC---EEEEECCC T ss_conf 7999999998686230-----48-9982---89997379
class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: RNA helicase
domain: HCV helicase domain
species: Human hepatitis C virus (HCV), different isolates [TaxId: 11103]