HHSEARCH alignment of GI: 254780130 and SCOP domain: d1z3ix1

Alignment
>d1z3ix1 c.37.1.19 (X:390-735) Rad54-like, Rad54L {Zebra fish (Danio rerio) [TaxId: 7955]}
Probab=100.00  E-value=6.7e-41  Score=243.29  Aligned_cols=189  Identities=20%  Similarity=0.322  Sum_probs=149.2

Q ss_pred             HHHHHHHHHHHHHHC-CCCEEHHHHHHHHHHHHHHCCCCHHCC-----------CC----------CCCCCCCHHHHHHH
Q ss_conf             358999999999735-783209999999999988607700034-----------45----------65420572343349
Q gi|254780130|r    2 KQYHKFQRELYCDLQ-GENIEAFNSASKTVKCLQLANGAVYYD-----------EE----------KHWKEVHDEKIKAL   59 (205)
Q Consensus         2 k~Y~~l~~~~~~~~~-~~~i~a~~~~~~~~kL~Ql~~g~~~~d-----------~~----------~~~~~~~~~Kl~~l   59 (205)
                      +.|+++.+....... .......+.+..+++|+|+||||....           ..          .......++|+..|
T Consensus        27 ~lY~~~l~~~~~~~~~~~~~~~~~~L~~l~~LRkiCnHP~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~S~Kl~~L  106 (346)
T d1z3ix1          27 ELYKLFLKQAKPVESLQTGKISVSSLSSITSLKKLCNHPALIYEKCLTGEEGFDGALDLFPQNYSTKAVEPQLSGKMLVL  106 (346)
T ss_dssp             HHHHHHHHHHCGGGSSCTTCCCHHHHHHHHHHHHHHHCTHHHHHHHHHTCTTCTTGGGTSCSSCCSSSCCGGGSHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCHHHHCCCCCCCCCCCCCCCHHHHHH
T ss_conf             99999999899998654487168999999999999579988611110221123200331233410000140017899999


Q ss_pred             HHHHHH---CCCCCEEEHHHHHHHHHHHHHHH----------HCCCCHHHHHHHHHHHHCCC--CCEEEECHHHHHHHHH
Q ss_conf             999861---48997110578999999987653----------04778234899999972789--8699972144323322
Q gi|254780130|r   60 EVIIEK---ANAAPIIVAYHFNSDLARLQKAF----------PQGRTLDKDPCTIQEWNEGK--IPLLFAHPASCGHGLN  124 (205)
Q Consensus        60 ~~ii~~---~~~~kviVf~~f~~~l~~l~~~~----------~~~~~~~~r~~~i~~f~~~~--~~Vll~~~~a~g~Gln  124 (205)
                      .+++..   .+|+|||||++|...++.|...+          .++.+..+|..+++.|++++  ..|||++++|||+|||
T Consensus       107 ~~ll~~~~~~~g~KvlIFs~~~~~ld~l~~~l~~~g~~~~~l~G~~~~~~R~~~i~~F~~~~~~~~vlLls~~agg~Gln  186 (346)
T d1z3ix1         107 DYILAMTRTTTSDKVVLVSNYTQTLDLFEKLCRNRRYLYVRLDGTMSIKKRAKIVERFNNPSSPEFIFMLSSKAGGCGLN  186 (346)
T ss_dssp             HHHHHHHHHHCCCEEEEEESCHHHHHHHHHHHHHHTCCEEEECSSCCHHHHHHHHHHHHSTTCCCCEEEEEGGGSCTTCC
T ss_pred             HHHHHHHHHHCCCCEEEEEEHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEECCHHHHHCCC
T ss_conf             99999988751895168863014567999997630024110111002788999998651023433025403314443356


Q ss_pred             HHHHCCEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             432067589726899988802255557666542026577539999983889589999999999999999999
Q gi|254780130|r  125 LQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN  196 (205)
Q Consensus       125 L~~a~~~vI~~~~~~n~~~~~Qa~~Ri~~~r~hR~GQ~~~v~v~~l~~~~tiEe~i~~~l~~K~~~~~~~l~  196 (205)
                      || +|+++|+||++|||..+.||++|+     ||+||+++|+||+|+++||||++|++++..|..+++.+++
T Consensus       187 L~-~a~~vi~~d~~wnp~~~~Qa~~R~-----~R~GQ~~~V~v~rli~~~TiEe~i~~~~~~K~~l~~~v~~  252 (346)
T d1z3ix1         187 LI-GANRLVMFDPDWNPANDEQAMARV-----WRDGQKKTCYIYRLLSTGTIEEKILQRQAHKKALSSCVVD  252 (346)
T ss_dssp             CT-TEEEEEECSCCSSHHHHHHHHTTS-----SSTTCCSCEEEEEEEETTSHHHHHHHHHHHHHHTSCCCCS
T ss_pred             CC-CCEEEEEECCCCCCCHHHHHHHCC-----CCCCCCCCEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHC
T ss_conf             56-430799945788615586763334-----0348998438999873898999999999999999998758


SCOP domain information

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Tandem AAA-ATPase domain
domain: Rad54-like, Rad54L
species: Zebra fish (Danio rerio) [TaxId: 7955]