BLASTP 2.2.22 [Sep-27-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= gi|254780130|ref|YP_003064543.1| hypothetical protein CLIBASIA_00045 [Candidatus Liberibacter asiaticus str. psy62] (205 letters) Database: nr 13,984,884 sequences; 4,792,584,752 total letters Searching..................................................done Results from round 1 >gi|317120757|gb|ADV02578.1| SNF2 Dead box helicase [Candidatus Liberibacter asiaticus] Length = 460 Score = 430 bits (1106), Expect = e-119, Method: Compositional matrix adjust. Identities = 205/205 (100%), Positives = 205/205 (100%) Query: 1 MKQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 MKQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE Sbjct: 256 MKQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 315 Query: 61 VIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCG 120 VIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCG Sbjct: 316 VIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCG 375 Query: 121 HGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELV 180 HGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELV Sbjct: 376 HGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELV 435 Query: 181 LQRLRTKSTIQDLLLNALKKETIHV 205 LQRLRTKSTIQDLLLNALKKETIHV Sbjct: 436 LQRLRTKSTIQDLLLNALKKETIHV 460 >gi|255764515|ref|YP_003065608.2| SNF2 related [Candidatus Liberibacter asiaticus str. psy62] gi|254547866|gb|ACT57668.2| SNF2 related [Candidatus Liberibacter asiaticus str. psy62] Length = 458 Score = 430 bits (1105), Expect = e-119, Method: Compositional matrix adjust. Identities = 205/205 (100%), Positives = 205/205 (100%) Query: 1 MKQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 MKQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE Sbjct: 254 MKQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 313 Query: 61 VIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCG 120 VIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCG Sbjct: 314 VIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCG 373 Query: 121 HGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELV 180 HGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELV Sbjct: 374 HGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELV 433 Query: 181 LQRLRTKSTIQDLLLNALKKETIHV 205 LQRLRTKSTIQDLLLNALKKETIHV Sbjct: 434 LQRLRTKSTIQDLLLNALKKETIHV 458 >gi|317120700|gb|ADV02523.1| SNF2 Dead box helicase [Liberibacter phage SC1] gi|317120743|gb|ADV02565.1| SNF2 Dead box helicase [Liberibacter phage SC2] gi|317120804|gb|ADV02625.1| SNF2 Dead box helicase [Candidatus Liberibacter asiaticus] Length = 461 Score = 429 bits (1104), Expect = e-118, Method: Compositional matrix adjust. Identities = 205/205 (100%), Positives = 205/205 (100%) Query: 1 MKQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 MKQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE Sbjct: 257 MKQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 316 Query: 61 VIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCG 120 VIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCG Sbjct: 317 VIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCG 376 Query: 121 HGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELV 180 HGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELV Sbjct: 377 HGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELV 436 Query: 181 LQRLRTKSTIQDLLLNALKKETIHV 205 LQRLRTKSTIQDLLLNALKKETIHV Sbjct: 437 LQRLRTKSTIQDLLLNALKKETIHV 461 >gi|254780130|ref|YP_003064543.1| hypothetical protein CLIBASIA_00045 [Candidatus Liberibacter asiaticus str. psy62] gi|254039807|gb|ACT56603.1| hypothetical protein CLIBASIA_00045 [Candidatus Liberibacter asiaticus str. psy62] Length = 205 Score = 428 bits (1100), Expect = e-118, Method: Compositional matrix adjust. Identities = 205/205 (100%), Positives = 205/205 (100%) Query: 1 MKQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 MKQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE Sbjct: 1 MKQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 Query: 61 VIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCG 120 VIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCG Sbjct: 61 VIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCG 120 Query: 121 HGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELV 180 HGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELV Sbjct: 121 HGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELV 180 Query: 181 LQRLRTKSTIQDLLLNALKKETIHV 205 LQRLRTKSTIQDLLLNALKKETIHV Sbjct: 181 LQRLRTKSTIQDLLLNALKKETIHV 205 >gi|317120844|gb|ADV02665.1| SNF2 Dead box helicase [Candidatus Liberibacter asiaticus] Length = 461 Score = 421 bits (1081), Expect = e-116, Method: Compositional matrix adjust. Identities = 200/205 (97%), Positives = 203/205 (99%) Query: 1 MKQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 +K Y KFQREL+CD+QGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE Sbjct: 257 LKLYRKFQRELFCDIQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 316 Query: 61 VIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCG 120 VIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCG Sbjct: 317 VIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCG 376 Query: 121 HGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELV 180 HGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELV Sbjct: 377 HGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELV 436 Query: 181 LQRLRTKSTIQDLLLNALKKETIHV 205 LQRLRTKSTIQDLLLNALKKETIHV Sbjct: 437 LQRLRTKSTIQDLLLNALKKETIHV 461 >gi|315122937|ref|YP_004063426.1| SNF2 related protein [Candidatus Liberibacter solanacearum CLso-ZC1] gi|313496339|gb|ADR52938.1| SNF2 related protein [Candidatus Liberibacter solanacearum CLso-ZC1] Length = 456 Score = 330 bits (845), Expect = 1e-88, Method: Compositional matrix adjust. Identities = 151/200 (75%), Positives = 179/200 (89%) Query: 1 MKQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 +K Y KFQREL+C++QGE + AFNSASKTVKCLQLANGAVY DE WKEVH+ KI+AL+ Sbjct: 255 LKLYRKFQRELFCEIQGEPLVAFNSASKTVKCLQLANGAVYTDESHSWKEVHNAKIEALK 314 Query: 61 VIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCG 120 I+E+A +P++VAYHFNSDL RL KAFPQGR LDK+P TI++WN GKIPLLFAHPASC Sbjct: 315 AIVEEAGRSPVLVAYHFNSDLMRLFKAFPQGRHLDKNPQTIKDWNAGKIPLLFAHPASCA 374 Query: 121 HGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELV 180 HGLNLQYGGNILVFFSLWWDLE HQQMIERIG RQ+QAGFKRAVF++YLIA++TIDEL+ Sbjct: 375 HGLNLQYGGNILVFFSLWWDLETHQQMIERIGTLRQKQAGFKRAVFIHYLIAEHTIDELI 434 Query: 181 LQRLRTKSTIQDLLLNALKK 200 L+RL+TK+T+Q++LLNALKK Sbjct: 435 LKRLQTKATVQEILLNALKK 454 >gi|315121969|ref|YP_004062458.1| SNF2 related protein [Candidatus Liberibacter solanacearum CLso-ZC1] gi|313495371|gb|ADR51970.1| SNF2 related protein [Candidatus Liberibacter solanacearum CLso-ZC1] Length = 456 Score = 328 bits (840), Expect = 4e-88, Method: Compositional matrix adjust. Identities = 151/200 (75%), Positives = 178/200 (89%) Query: 1 MKQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 +K Y KFQREL+C++QGE + AFNSASKTVKCLQLANGAVY DE WKEVH+ KI+AL+ Sbjct: 255 LKLYRKFQRELFCEIQGEPLVAFNSASKTVKCLQLANGAVYTDENHSWKEVHNAKIEALK 314 Query: 61 VIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCG 120 I+E+A P++VAYHFNSDL RL KAFPQGR LDK+P TI++WN GKIPLLFAHPASC Sbjct: 315 AIVEEAGGCPLLVAYHFNSDLMRLFKAFPQGRHLDKNPQTIKDWNAGKIPLLFAHPASCA 374 Query: 121 HGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELV 180 HGLNLQYGGNILVFFSLWWDLE HQQMIERIG RQ+QAGFKRAVF++YLIA++TIDEL+ Sbjct: 375 HGLNLQYGGNILVFFSLWWDLETHQQMIERIGPLRQKQAGFKRAVFIHYLIAEHTIDELI 434 Query: 181 LQRLRTKSTIQDLLLNALKK 200 L+RL+TK+T+Q++LLNALKK Sbjct: 435 LKRLQTKATVQEILLNALKK 454 >gi|212712312|ref|ZP_03320440.1| hypothetical protein PROVALCAL_03400 [Providencia alcalifaciens DSM 30120] gi|212685058|gb|EEB44586.1| hypothetical protein PROVALCAL_03400 [Providencia alcalifaciens DSM 30120] Length = 463 Score = 273 bits (697), Expect = 1e-71, Method: Compositional matrix adjust. Identities = 122/200 (61%), Positives = 163/200 (81%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEV 61 KQY + ++E++ +L+ E +EA N+A+KTVKCLQ+A+GA+Y D+ K+W E+HD KI+ALE Sbjct: 264 KQYQEMEKEMFLELEHEGVEALNAAAKTVKCLQIASGAIYTDDSKNWVELHDTKIQALES 323 Query: 62 IIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGH 121 II ++ PI+VAYH+ DL RL KAFP+GR LD DP T+++WN GKIP+LFAHPAS GH Sbjct: 324 IISESGGMPILVAYHWKHDLERLLKAFPKGRNLDADPQTLRDWNAGKIPILFAHPASAGH 383 Query: 122 GLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVL 181 GLNLQ GGNILVFFS WWDLE++QQ+IERIG TRQ QAG+ R VF+++LIA T+DE+V+ Sbjct: 384 GLNLQDGGNILVFFSHWWDLEQYQQIIERIGPTRQIQAGYNRPVFIHHLIAAGTMDEVVM 443 Query: 182 QRLRTKSTIQDLLLNALKKE 201 +R +K IQDLLL A+K++ Sbjct: 444 ERRNSKREIQDLLLEAMKRK 463 >gi|238920126|ref|YP_002933641.1| hypothetical protein NT01EI_2232 [Edwardsiella ictaluri 93-146] gi|238869695|gb|ACR69406.1| conserved hypothetical protein [Edwardsiella ictaluri 93-146] Length = 433 Score = 272 bits (696), Expect = 2e-71, Method: Compositional matrix adjust. Identities = 121/202 (59%), Positives = 165/202 (81%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEV 61 +QY + ++E++ +L GE IEA N+A+KTVKCLQ+A+GAVY D+ W E+HD K++AL+ Sbjct: 231 QQYREMEKEMFLELNGEGIEAPNAAAKTVKCLQIASGAVYTDDTGSWSELHDAKLQALDS 290 Query: 62 IIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGH 121 I+ +A AP++VAYH+ DL RL KAFP+GR LD+DP T+++WN GKIP+LFAHPAS GH Sbjct: 291 ILTEAAGAPVLVAYHWKHDLERLLKAFPRGRHLDQDPQTLRDWNAGKIPVLFAHPASAGH 350 Query: 122 GLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVL 181 GLN+Q GGNILVFFS WWDLE++QQ+IERIG TRQ QAG R VF++++IA +T+DE+V+ Sbjct: 351 GLNMQDGGNILVFFSHWWDLEQYQQIIERIGPTRQIQAGHNRPVFIHHIIAADTMDEMVM 410 Query: 182 QRLRTKSTIQDLLLNALKKETI 203 +R +K T+QDLLL+A+KK I Sbjct: 411 ERRNSKRTVQDLLLDAMKKRGI 432 >gi|323159216|gb|EFZ45206.1| DEAD box helicase [Escherichia coli E128010] Length = 435 Score = 270 bits (691), Expect = 6e-71, Method: Compositional matrix adjust. Identities = 119/202 (58%), Positives = 165/202 (81%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEV 61 +QY + ++E++ +L GE IEA N+A+KT+KCLQ+A+GAVY D+ W E+HD K++AL+ Sbjct: 233 QQYREMEKEMFLELNGEGIEAPNAAAKTLKCLQIASGAVYTDDTGSWSELHDTKLQALDS 292 Query: 62 IIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGH 121 I+ +A AP++VAYH+ DL RL KAFP+GR LD+DP T+++WN GKIP+LFAHPAS GH Sbjct: 293 ILTEAAGAPVLVAYHWKHDLERLLKAFPRGRHLDQDPQTLRDWNSGKIPVLFAHPASAGH 352 Query: 122 GLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVL 181 GLN+Q GGNILVFFS WWDLE++QQ+IERIG TRQ QAG R VF++++IA +T+DE+V+ Sbjct: 353 GLNMQDGGNILVFFSHWWDLEQYQQIIERIGPTRQIQAGHNRPVFIHHIIAADTMDEMVM 412 Query: 182 QRLRTKSTIQDLLLNALKKETI 203 +R +K T+QD+LL+A+KK I Sbjct: 413 ERRNSKRTVQDILLDAMKKRGI 434 >gi|218555139|ref|YP_002388052.1| hypothetical protein ECIAI1_2669 [Escherichia coli IAI1] gi|218361907|emb|CAQ99507.1| conserved hypothetical protein from bacteriophage origin [Escherichia coli IAI1] Length = 464 Score = 270 bits (691), Expect = 7e-71, Method: Compositional matrix adjust. Identities = 119/202 (58%), Positives = 165/202 (81%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEV 61 +QY + ++E++ +L GE IEA N+A+KT+KCLQ+A+GAVY D+ W E+HD K++AL+ Sbjct: 262 QQYREMEKEMFLELNGEGIEAPNAAAKTLKCLQIASGAVYTDDTGSWSELHDTKLQALDS 321 Query: 62 IIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGH 121 I+ +A AP++VAYH+ DL RL KAFP+GR LD+DP T+++WN GKIP+LFAHPAS GH Sbjct: 322 ILTEAAGAPVLVAYHWKHDLERLLKAFPRGRHLDQDPQTLRDWNSGKIPVLFAHPASAGH 381 Query: 122 GLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVL 181 GLN+Q GGNILVFFS WWDLE++QQ+IERIG TRQ QAG R VF++++IA +T+DE+V+ Sbjct: 382 GLNMQDGGNILVFFSHWWDLEQYQQIIERIGPTRQIQAGHNRPVFIHHIIAADTMDEMVM 441 Query: 182 QRLRTKSTIQDLLLNALKKETI 203 +R +K T+QD+LL+A+KK I Sbjct: 442 ERRNSKRTVQDILLDAMKKRGI 463 >gi|260845245|ref|YP_003223023.1| putative phage-related DNA helicase [Escherichia coli O103:H2 str. 12009] gi|257760392|dbj|BAI31889.1| predicted phage-related DNA helicase [Escherichia coli O103:H2 str. 12009] Length = 464 Score = 270 bits (691), Expect = 7e-71, Method: Compositional matrix adjust. Identities = 119/202 (58%), Positives = 165/202 (81%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEV 61 +QY + ++E++ +L GE IEA N+A+KT+KCLQ+A+GAVY D+ W E+HD K++AL+ Sbjct: 262 QQYREMEKEMFLELNGEGIEAPNAAAKTLKCLQIASGAVYTDDTGSWSELHDTKLQALDS 321 Query: 62 IIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGH 121 I+ +A AP++VAYH+ DL RL KAFP+GR LD+DP T+++WN GKIP+LFAHPAS GH Sbjct: 322 ILTEAAGAPVLVAYHWKHDLERLLKAFPRGRHLDQDPQTLRDWNSGKIPVLFAHPASAGH 381 Query: 122 GLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVL 181 GLN+Q GGNILVFFS WWDLE++QQ+IERIG TRQ QAG R VF++++IA +T+DE+V+ Sbjct: 382 GLNMQDGGNILVFFSHWWDLEQYQQIIERIGPTRQIQAGHNRPVFIHHIIAADTMDEMVM 441 Query: 182 QRLRTKSTIQDLLLNALKKETI 203 +R +K T+QD+LL+A+KK I Sbjct: 442 ERRNSKRTVQDILLDAMKKRGI 463 >gi|262043428|ref|ZP_06016553.1| SNF2 domain protein [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] gi|259039254|gb|EEW40400.1| SNF2 domain protein [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] Length = 464 Score = 270 bits (690), Expect = 8e-71, Method: Compositional matrix adjust. Identities = 120/202 (59%), Positives = 165/202 (81%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEV 61 +QY + ++E++ +L GE IEA N+A+KTVKCLQ+A+GAVY D+ W E+HD K++AL+ Sbjct: 262 QQYREMEKEMFLELNGEGIEAPNAAAKTVKCLQIASGAVYTDDAGSWSELHDAKLQALDS 321 Query: 62 IIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGH 121 I+ +A AP++VAYH+ DL RL KAFP+GR LD+DP T+++WN GKIP+LFAHPAS GH Sbjct: 322 ILTEAAGAPVLVAYHWKHDLERLLKAFPRGRHLDQDPQTLRDWNAGKIPVLFAHPASAGH 381 Query: 122 GLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVL 181 GLN+Q GGNILVFFS WWDLE++QQ+IERIG TRQ QAG R VF++++IA +T+DE+V+ Sbjct: 382 GLNMQDGGNILVFFSHWWDLEQYQQIIERIGPTRQIQAGHNRPVFIHHIIAVDTMDEMVM 441 Query: 182 QRLRTKSTIQDLLLNALKKETI 203 +R +K T+QD+LL+A+KK I Sbjct: 442 ERRDSKRTVQDILLDAMKKRGI 463 >gi|194429287|ref|ZP_03061814.1| dead box helicase [Escherichia coli B171] gi|194412695|gb|EDX28990.1| dead box helicase [Escherichia coli B171] Length = 464 Score = 270 bits (690), Expect = 9e-71, Method: Compositional matrix adjust. Identities = 119/202 (58%), Positives = 165/202 (81%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEV 61 +QY + ++E++ +L GE IEA N+A+KT+KCLQ+A+GAVY D+ W E+HD K++AL+ Sbjct: 262 QQYREMEKEMFLELNGEGIEAPNAAAKTLKCLQIASGAVYTDDTGSWSELHDTKLQALDS 321 Query: 62 IIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGH 121 I+ +A AP++VAYH+ DL RL KAFP+GR LD+DP T+++WN GKIP+LFAHPAS GH Sbjct: 322 ILTEAAGAPVLVAYHWKHDLERLLKAFPRGRHLDQDPQTLRDWNSGKIPVLFAHPASAGH 381 Query: 122 GLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVL 181 GLN+Q GGNILVFFS WWDLE++QQ+IERIG TRQ QAG R VF++++IA +T+DE+V+ Sbjct: 382 GLNMQDGGNILVFFSHWWDLEQYQQIIERIGPTRQIQAGHNRPVFIHHIIAADTMDEMVM 441 Query: 182 QRLRTKSTIQDLLLNALKKETI 203 +R +K T+QD+LL+A+KK I Sbjct: 442 ERRNSKRTVQDILLDAMKKRGI 463 >gi|191174014|ref|ZP_03035531.1| dead box helicase [Escherichia coli F11] gi|190905705|gb|EDV65327.1| dead box helicase [Escherichia coli F11] gi|324014343|gb|EGB83562.1| SNF2 domain protein [Escherichia coli MS 60-1] Length = 464 Score = 270 bits (690), Expect = 9e-71, Method: Compositional matrix adjust. Identities = 119/202 (58%), Positives = 165/202 (81%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEV 61 +QY + ++E++ +L GE IEA N+A+KT+KCLQ+A+GAVY D+ W E+HD K++AL+ Sbjct: 262 QQYREMEKEMFLELNGEGIEAPNAAAKTLKCLQIASGAVYTDDTGSWSELHDTKLQALDS 321 Query: 62 IIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGH 121 I+ +A AP++VAYH+ DL RL KAFP+GR LD+DP T+++WN GKIP+LFAHPAS GH Sbjct: 322 ILTEAAGAPVLVAYHWKHDLERLLKAFPRGRHLDQDPQTLRDWNSGKIPVLFAHPASAGH 381 Query: 122 GLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVL 181 GLN+Q GGNILVFFS WWDLE++QQ+IERIG TRQ QAG R VF++++IA +T+DE+V+ Sbjct: 382 GLNMQDGGNILVFFSHWWDLEQYQQIIERIGPTRQIQAGHNRPVFIHHIIAADTMDEMVM 441 Query: 182 QRLRTKSTIQDLLLNALKKETI 203 +R +K T+QD+LL+A+KK I Sbjct: 442 ERRNSKRTVQDILLDAMKKRGI 463 >gi|331654021|ref|ZP_08355022.1| putative protein p41 [Escherichia coli M718] gi|331048870|gb|EGI20946.1| putative protein p41 [Escherichia coli M718] Length = 465 Score = 270 bits (690), Expect = 9e-71, Method: Compositional matrix adjust. Identities = 119/202 (58%), Positives = 165/202 (81%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEV 61 +QY + ++E++ +L GE IEA N+A+KT+KCLQ+A+GAVY D+ W E+HD K++AL+ Sbjct: 263 QQYREMEKEMFLELNGEGIEAPNAAAKTLKCLQIASGAVYTDDTGSWSELHDTKLQALDS 322 Query: 62 IIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGH 121 I+ +A AP++VAYH+ DL RL KAFP+GR LD+DP T+++WN GKIP+LFAHPAS GH Sbjct: 323 ILTEAAGAPVLVAYHWKHDLERLLKAFPRGRHLDQDPQTLRDWNSGKIPVLFAHPASAGH 382 Query: 122 GLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVL 181 GLN+Q GGNILVFFS WWDLE++QQ+IERIG TRQ QAG R VF++++IA +T+DE+V+ Sbjct: 383 GLNMQDGGNILVFFSHWWDLEQYQQIIERIGPTRQIQAGHNRPVFIHHIIAADTMDEMVM 442 Query: 182 QRLRTKSTIQDLLLNALKKETI 203 +R +K T+QD+LL+A+KK I Sbjct: 443 ERRNSKRTVQDILLDAMKKRGI 464 >gi|188492213|ref|ZP_02999483.1| dead box helicase [Escherichia coli 53638] gi|188487412|gb|EDU62515.1| dead box helicase [Escherichia coli 53638] gi|332088071|gb|EGI93196.1| DEAD box helicase [Shigella boydii 5216-82] Length = 464 Score = 270 bits (689), Expect = 1e-70, Method: Compositional matrix adjust. Identities = 119/202 (58%), Positives = 165/202 (81%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEV 61 +QY + ++E++ +L GE+IEA N+A+KT KCLQ+A+GAVY D+ W E+HD K++AL+ Sbjct: 262 QQYREMEKEMFLELNGESIEAPNAAAKTQKCLQIASGAVYTDDTGSWSELHDTKLQALDS 321 Query: 62 IIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGH 121 I+ +A AP++VAYH+ DL RL KAFP+GR LD+DP T+++WN GKIP+LFAHPAS GH Sbjct: 322 ILTEAAGAPVLVAYHWKHDLERLLKAFPRGRHLDQDPQTLRDWNSGKIPVLFAHPASAGH 381 Query: 122 GLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVL 181 GLN+Q GGNILVFFS WWDLE++QQ+IERIG TRQ QAG R VF++++IA +T+DE+V+ Sbjct: 382 GLNMQDGGNILVFFSHWWDLEQYQQIIERIGPTRQIQAGHNRPVFIHHIIAADTMDEMVM 441 Query: 182 QRLRTKSTIQDLLLNALKKETI 203 +R +K T+QD+LL+A+KK I Sbjct: 442 ERRNSKRTVQDILLDAMKKRGI 463 >gi|291283833|ref|YP_003500651.1| Superfamily II DNA/RNA helicases, SNF2 family [Escherichia coli O55:H7 str. CB9615] gi|290763706|gb|ADD57667.1| Superfamily II DNA/RNA helicases, SNF2 family [Escherichia coli O55:H7 str. CB9615] Length = 463 Score = 270 bits (689), Expect = 1e-70, Method: Compositional matrix adjust. Identities = 118/202 (58%), Positives = 165/202 (81%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEV 61 +QY + ++E++ +L GE IEA N+A+KT+KCLQ+A+GA+Y D+ W E+HD K++AL+ Sbjct: 261 QQYREMEKEMFLELNGEGIEAPNAAAKTLKCLQIASGALYTDDTGSWSELHDTKLQALDS 320 Query: 62 IIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGH 121 I+ +A AP++VAYH+ DL RL KAFP+GR LD+DP T+++WN GKIP+LFAHPAS GH Sbjct: 321 ILTEAAGAPVLVAYHWKHDLERLLKAFPRGRHLDQDPQTLRDWNSGKIPVLFAHPASAGH 380 Query: 122 GLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVL 181 GLN+Q GGNILVFFS WWDLE++QQ+IERIG TRQ QAG R VF++++IA +T+DE+V+ Sbjct: 381 GLNMQDGGNILVFFSHWWDLEQYQQIIERIGPTRQIQAGHNRPVFIHHIIAADTMDEMVM 440 Query: 182 QRLRTKSTIQDLLLNALKKETI 203 +R +K T+QD+LL+A+KK I Sbjct: 441 ERRNSKRTVQDILLDAMKKRGI 462 >gi|331648305|ref|ZP_08349394.1| putative protein p41 [Escherichia coli M605] gi|331042854|gb|EGI14995.1| putative protein p41 [Escherichia coli M605] Length = 464 Score = 269 bits (688), Expect = 1e-70, Method: Compositional matrix adjust. Identities = 119/202 (58%), Positives = 164/202 (81%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEV 61 +QY + ++E++ +L GE IEA N+A+KT+KCLQ+A+GAVY D+ W E+HD K++AL+ Sbjct: 262 QQYREMEKEMFLELNGEGIEAPNAAAKTLKCLQIASGAVYTDDTGSWSELHDTKLQALDS 321 Query: 62 IIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGH 121 I+ +A AP++VAYH+ DL RL KAFP+GR LD+DP T+++WN GKIP+LFAHPAS H Sbjct: 322 ILTEAAGAPVLVAYHWKHDLERLLKAFPRGRHLDQDPQTLRDWNSGKIPVLFAHPASASH 381 Query: 122 GLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVL 181 GLN+Q GGNILVFFS WWDLE++QQ+IERIG TRQ QAG R VF++++IA +T+DE+V+ Sbjct: 382 GLNMQDGGNILVFFSHWWDLEQYQQIIERIGPTRQIQAGHNRPVFIHHIIAADTMDEMVM 441 Query: 182 QRLRTKSTIQDLLLNALKKETI 203 +R +K T+QD+LLNA+KK I Sbjct: 442 ERRNSKRTVQDILLNAMKKRGI 463 >gi|82777983|ref|YP_404332.1| hypothetical protein SDY_2798 [Shigella dysenteriae Sd197] gi|309784630|ref|ZP_07679265.1| DEAD box helicase [Shigella dysenteriae 1617] gi|81242131|gb|ABB62841.1| hypothetical bacteriophage protein [Shigella dysenteriae Sd197] gi|308927527|gb|EFP72999.1| DEAD box helicase [Shigella dysenteriae 1617] Length = 311 Score = 268 bits (684), Expect = 4e-70, Method: Compositional matrix adjust. Identities = 118/202 (58%), Positives = 165/202 (81%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEV 61 +QY + ++E++ +L GE IEA N+A+KT+KCLQ+A+GAVY D+ W E+HD K++AL+ Sbjct: 109 QQYREMEKEMFLELNGEGIEAPNAAAKTLKCLQIASGAVYTDDAGSWSELHDTKLQALDS 168 Query: 62 IIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGH 121 I+ +A AP++VAYH+ DL RL KAFP+GR LD+DP T+++WN GKIP+LFAHPAS GH Sbjct: 169 ILTEAAGAPVLVAYHWKHDLERLLKAFPRGRHLDQDPQTLRDWNSGKIPVLFAHPASAGH 228 Query: 122 GLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVL 181 GLN+Q GGNILVFFS WWDLE++QQ+IERIG TRQ QAG R VF++++IA +T+DE+V+ Sbjct: 229 GLNMQDGGNILVFFSHWWDLEQYQQIIERIGPTRQIQAGHNRPVFIHHIIAADTMDEMVM 288 Query: 182 QRLRTKSTIQDLLLNALKKETI 203 ++ +K T+QD+LL+A+KK I Sbjct: 289 EQRNSKRTVQDILLDAMKKRGI 310 >gi|323173123|gb|EFZ58754.1| DEAD box helicase [Escherichia coli LT-68] Length = 433 Score = 268 bits (684), Expect = 5e-70, Method: Compositional matrix adjust. Identities = 118/202 (58%), Positives = 164/202 (81%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEV 61 +QY + ++E++ +L GE IEA N+A+KT+KCLQ+A+GAVY D+ W E+HD K++AL+ Sbjct: 231 QQYREMEKEMFLELNGEGIEAPNAAAKTLKCLQIASGAVYTDDAGSWSELHDTKLQALDS 290 Query: 62 IIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGH 121 I+ +A AP++VAYH+ DL RL KAFP+GR LD+DP T+++WN GKIP+LFAHPAS GH Sbjct: 291 ILTEAAGAPVLVAYHWKHDLERLLKAFPRGRHLDQDPQTLRDWNSGKIPVLFAHPASAGH 350 Query: 122 GLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVL 181 GLN+Q GG ILVFFS WWDLE++QQ+IERIG TRQ QAG R VF++++IA +T+DE+V+ Sbjct: 351 GLNMQDGGYILVFFSHWWDLEQYQQIIERIGPTRQIQAGHNRPVFIHHIIAADTMDEMVM 410 Query: 182 QRLRTKSTIQDLLLNALKKETI 203 +R +K T+QD+LL+A+KK I Sbjct: 411 ERRNSKRTVQDILLDAMKKRGI 432 >gi|332160953|ref|YP_004297530.1| Dead box helicase [Yersinia enterocolitica subsp. palearctica 105.5R(r)] gi|325665183|gb|ADZ41827.1| Dead box helicase [Yersinia enterocolitica subsp. palearctica 105.5R(r)] Length = 432 Score = 267 bits (682), Expect = 7e-70, Method: Compositional matrix adjust. Identities = 120/201 (59%), Positives = 160/201 (79%) Query: 3 QYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVI 62 QY + ++E++ + +IEA N+ASKT+KCLQLA+GA+Y DE +W E+HD K++ALE I Sbjct: 231 QYKEMEKEMFLQIGDHDIEAMNAASKTMKCLQLASGAIYTDEAGNWTEIHDAKLQALESI 290 Query: 63 IEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHG 122 + +A+ P++VAYHF SDLARL KAFP+GR LD DP T ++WN G IP+LFAHPAS GHG Sbjct: 291 VAEASGMPVLVAYHFKSDLARLLKAFPKGRHLDADPQTQRDWNAGLIPVLFAHPASAGHG 350 Query: 123 LNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQ 182 LNLQ GGNIL FFS WWDLE++QQ+IERIG TRQ QAG KR V++Y++IA++T+DELV + Sbjct: 351 LNLQDGGNILAFFSHWWDLEQYQQIIERIGPTRQAQAGHKRPVWIYHIIAEDTVDELVKE 410 Query: 183 RLRTKSTIQDLLLNALKKETI 203 R +K +QD+LL A+KK + Sbjct: 411 RRDSKREVQDILLEAMKKRGL 431 >gi|41179407|ref|NP_958716.1| Bbp47 [Bordetella phage BPP-1] gi|45569539|ref|NP_996608.1| DEAD box helicase [Bordetella phage BMP-1] gi|45580790|ref|NP_996656.1| DEAD box helicase [Bordetella phage BIP-1] gi|40950146|gb|AAR97712.1| Bbp47 [Bordetella phage BPP-1] Length = 464 Score = 267 bits (682), Expect = 7e-70, Method: Compositional matrix adjust. Identities = 124/199 (62%), Positives = 157/199 (78%), Gaps = 2/199 (1%) Query: 4 YHKFQRELYCDLQ-GENIEAFNSASKTVKCLQLANGAVYYDEE-KHWKEVHDEKIKALEV 61 Y +RE + L+ G IEAFN+ASKT+KCLQLANGA+Y D+ W +VHD K++ALE Sbjct: 263 YRDMEREAFLALECGIEIEAFNAASKTIKCLQLANGAIYTDDTATTWADVHDVKLQALES 322 Query: 62 IIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGH 121 I+ +A P++VAYHF SDLARLQ+AFPQGR LD++P TI++WN GKIPLLFAHPAS GH Sbjct: 323 IVAEAAGMPVLVAYHFKSDLARLQRAFPQGRALDQNPQTIRDWNAGKIPLLFAHPASAGH 382 Query: 122 GLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVL 181 GLNLQ GGNIL FF WWDLE++QQ+IERIG TRQ QAG R VF+Y+++A +T+DELV+ Sbjct: 383 GLNLQDGGNILAFFGHWWDLEQYQQIIERIGPTRQAQAGHDRPVFIYHIVATDTMDELVM 442 Query: 182 QRLRTKSTIQDLLLNALKK 200 R +K +QDLLL A+K+ Sbjct: 443 ARRESKREVQDLLLEAMKR 461 >gi|170023443|ref|YP_001719948.1| hypothetical protein YPK_1197 [Yersinia pseudotuberculosis YPIII] gi|169749977|gb|ACA67495.1| conserved hypothetical protein [Yersinia pseudotuberculosis YPIII] Length = 463 Score = 266 bits (681), Expect = 9e-70, Method: Compositional matrix adjust. Identities = 121/201 (60%), Positives = 159/201 (79%) Query: 3 QYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVI 62 QY + ++E++ + IEA N+ASKT+KCLQLA+GA+Y DE +W E+HD K++ALE I Sbjct: 262 QYKEMEKEMFLQIGDHGIEAMNAASKTMKCLQLASGAIYTDEAGNWTEIHDAKLQALESI 321 Query: 63 IEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHG 122 I +A+ P++VAYHF SDLARL KAFP+GR LD DP T ++WN G IP+LFAHPAS GHG Sbjct: 322 ITEASGMPVLVAYHFKSDLARLLKAFPKGRHLDADPQTQRDWNAGLIPVLFAHPASAGHG 381 Query: 123 LNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQ 182 LNLQ GGNIL FFS WWDLE++QQ+IERIG TRQ QAG KR V++Y++IA++T+DELV + Sbjct: 382 LNLQDGGNILAFFSHWWDLEQYQQIIERIGPTRQAQAGHKRPVWIYHIIAEDTVDELVKE 441 Query: 183 RLRTKSTIQDLLLNALKKETI 203 R +K +QD+LL A+KK + Sbjct: 442 RRDSKREVQDILLEAMKKRGL 462 >gi|204927042|ref|ZP_03218244.1| dead box helicase [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] gi|204323707|gb|EDZ08902.1| dead box helicase [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] Length = 463 Score = 266 bits (681), Expect = 1e-69, Method: Compositional matrix adjust. Identities = 118/202 (58%), Positives = 163/202 (80%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEV 61 +QY + ++E++ +L GE IEA N+A+KTVKCLQ+A+GAVY D+ W E+HD K++AL+ Sbjct: 261 QQYREMEKEMFLELNGEGIEAPNAAAKTVKCLQIASGAVYTDDAGSWSELHDAKLQALDS 320 Query: 62 IIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGH 121 I+ +A AP++VAYH+ DL RL KAFP+GR LD+ P T+++WN GKIP+LFAHPAS GH Sbjct: 321 ILTEAAGAPVLVAYHWKHDLERLLKAFPRGRHLDQGPQTLRDWNAGKIPVLFAHPASAGH 380 Query: 122 GLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVL 181 GLN+Q GGNILVFFS WWDLE++QQ+IERIG TRQ QAG R VF++++I +T+DE+V+ Sbjct: 381 GLNMQDGGNILVFFSHWWDLEQYQQIIERIGPTRQIQAGHNRPVFIHHIITADTMDEMVM 440 Query: 182 QRLRTKSTIQDLLLNALKKETI 203 +R +K T+QD+LL+A+KK I Sbjct: 441 ERRNSKRTVQDILLDAMKKRGI 462 >gi|295096884|emb|CBK85974.1| Superfamily II DNA/RNA helicases, SNF2 family [Enterobacter cloacae subsp. cloacae NCTC 9394] Length = 466 Score = 266 bits (680), Expect = 1e-69, Method: Compositional matrix adjust. Identities = 117/202 (57%), Positives = 163/202 (80%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEV 61 + Y + ++E++ +L G+ IEA N+A+KTVKCLQ+A+GAVY D+ W E+HD K++AL+ Sbjct: 264 QHYREMEKEMFLELNGKGIEAPNAAAKTVKCLQIASGAVYTDDAGSWSELHDAKLQALDS 323 Query: 62 IIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGH 121 I+ +A AP++VAYH+ DL RL+KAFP+GR LD+DP T+++WN GKIP+LFAHPAS GH Sbjct: 324 ILTEAAGAPVLVAYHWKHDLERLRKAFPKGRHLDQDPQTLRDWNAGKIPVLFAHPASAGH 383 Query: 122 GLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVL 181 GLN+Q GGNILVFFS WWDLE++QQ+IERIG TRQ QAG R VF++++IA T+DE+V+ Sbjct: 384 GLNMQDGGNILVFFSHWWDLEQYQQIIERIGPTRQIQAGHNRPVFIHHIIATGTMDEMVM 443 Query: 182 QRLRTKSTIQDLLLNALKKETI 203 +R +K +QD+LL+A+KK I Sbjct: 444 ERRNSKRKVQDILLDAMKKRGI 465 >gi|330862108|emb|CBX72272.1| putative protein p41 [Yersinia enterocolitica W22703] Length = 432 Score = 265 bits (678), Expect = 2e-69, Method: Compositional matrix adjust. Identities = 119/201 (59%), Positives = 159/201 (79%) Query: 3 QYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVI 62 QY + ++E++ + +IEA N+ASKT+KCLQLA+GA+Y DE +W E+HD K++ALE I Sbjct: 231 QYKEMEKEMFLQIGDHDIEAMNAASKTMKCLQLASGAIYTDEAGNWTEIHDAKLQALESI 290 Query: 63 IEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHG 122 + +A+ P++VAYHF SDL RL KAFP+GR LD DP T ++WN G IP+LFAHPAS GHG Sbjct: 291 VAEASGMPVLVAYHFKSDLTRLLKAFPKGRHLDADPQTQRDWNAGLIPVLFAHPASAGHG 350 Query: 123 LNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQ 182 LNLQ GGNIL FFS WWDLE++QQ+IERIG TRQ QAG KR V++Y++IA++T+DELV + Sbjct: 351 LNLQDGGNILAFFSHWWDLEQYQQIIERIGPTRQAQAGHKRPVWIYHIIAEDTVDELVKE 410 Query: 183 RLRTKSTIQDLLLNALKKETI 203 R +K +QD+LL A+KK + Sbjct: 411 RRDSKREVQDILLEAMKKRGL 431 >gi|9633588|ref|NP_051002.1| hypothetical protein APSE-1_41 [Acyrthosiphon pisum bacteriophage APSE-1] gi|9910955|sp|Q9T1Q7|VP41_BPAPS RecName: Full=Putative protein p41 gi|6118036|gb|AAF03984.1|AF157835_41 P41 [Endosymbiont phage APSE-1] Length = 460 Score = 264 bits (675), Expect = 4e-69, Method: Compositional matrix adjust. Identities = 115/199 (57%), Positives = 159/199 (79%) Query: 3 QYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVI 62 YH ++EL+ +L IEA N+A+KT+K LQ+A+GA+Y D+ ++W E+HD KI+ALE I Sbjct: 262 HYHAMEKELFLELGESAIEALNAAAKTIKILQIASGAIYSDDNRNWTEIHDAKIQALESI 321 Query: 63 IEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHG 122 + ++ P++VAYH+ DL RL KAFP+G+ LD +P T+ +WN GKIPLLFAHPASCGHG Sbjct: 322 VNESGGTPVLVAYHWKHDLERLLKAFPKGKNLDANPRTLTDWNNGKIPLLFAHPASCGHG 381 Query: 123 LNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQ 182 LNLQ GGNILVFFS WWDLE++QQ+IERIG TRQ QAG R VF+++++A++T+DE+V++ Sbjct: 382 LNLQDGGNILVFFSHWWDLEQYQQIIERIGPTRQAQAGHNRPVFIHHIVAKDTLDEVVME 441 Query: 183 RLRTKSTIQDLLLNALKKE 201 R +K IQDLLL A+K++ Sbjct: 442 RRNSKRAIQDLLLEAMKRK 460 >gi|71900964|ref|ZP_00683077.1| SNF2-related [Xylella fastidiosa Ann-1] gi|71729269|gb|EAO31387.1| SNF2-related [Xylella fastidiosa Ann-1] Length = 472 Score = 261 bits (668), Expect = 3e-68, Method: Compositional matrix adjust. Identities = 120/201 (59%), Positives = 160/201 (79%), Gaps = 2/201 (0%) Query: 2 KQYHKFQRELYCDLQ-GENIEAFNSASKTVKCLQLANGAVYYDEEKH-WKEVHDEKIKAL 59 + Y +++++ L+ G +EAFN+ASKT+KCLQLANGA+Y D+ + W+ VHD K++AL Sbjct: 257 RLYKAMEQDMFIALECGAEVEAFNAASKTIKCLQLANGALYTDDTRQAWEVVHDAKLEAL 316 Query: 60 EVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASC 119 IIE+A P++VAYHF SD+ARLQ+AFP+GR LDK+P TI++WN G IP+LFAHPAS Sbjct: 317 HDIIEEAAGMPVLVAYHFKSDVARLQRAFPKGRALDKNPDTIRDWNAGNIPVLFAHPASA 376 Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 GHGLNLQ GGNIL FF WWDLE++QQ+IERIG TRQ QAG KR VF+++++A NT+DEL Sbjct: 377 GHGLNLQDGGNILAFFGHWWDLEQYQQIIERIGPTRQAQAGHKRPVFIHHIVAANTVDEL 436 Query: 180 VLQRLRTKSTIQDLLLNALKK 200 V+ R +K +QDLLL A+K+ Sbjct: 437 VMARRESKREVQDLLLEAVKR 457 >gi|71276270|ref|ZP_00652548.1| SNF2-related [Xylella fastidiosa Dixon] gi|71162878|gb|EAO12602.1| SNF2-related [Xylella fastidiosa Dixon] Length = 472 Score = 261 bits (668), Expect = 3e-68, Method: Compositional matrix adjust. Identities = 120/202 (59%), Positives = 160/202 (79%), Gaps = 2/202 (0%) Query: 2 KQYHKFQRELYCDLQ-GENIEAFNSASKTVKCLQLANGAVYYDEEKH-WKEVHDEKIKAL 59 + Y +++++ L+ G +EAFN+ASKT+KCLQLANGA+Y D+ + W+ VHD K++AL Sbjct: 257 RLYKAMEQDMFIALECGAEVEAFNAASKTIKCLQLANGALYTDDTRQAWEVVHDAKLEAL 316 Query: 60 EVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASC 119 IIE+A P++VAYHF SD+ARLQ+AFP+GR LDK+P TI++WN G IP+LFAHPAS Sbjct: 317 HDIIEEAAGMPVLVAYHFKSDVARLQRAFPKGRALDKNPDTIRDWNAGNIPVLFAHPASA 376 Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 GHGLNLQ GGNIL FF WWDLE++QQ+IERIG TRQ QAG KR VF+++++A NT+DEL Sbjct: 377 GHGLNLQDGGNILAFFGHWWDLEQYQQIIERIGPTRQAQAGHKRPVFIHHIVAANTVDEL 436 Query: 180 VLQRLRTKSTIQDLLLNALKKE 201 V+ R +K +QDLLL A+K+ Sbjct: 437 VMARRESKREVQDLLLEAVKRR 458 >gi|71274496|ref|ZP_00650784.1| SNF2-related [Xylella fastidiosa Dixon] gi|71900325|ref|ZP_00682460.1| SNF2-related [Xylella fastidiosa Ann-1] gi|71164228|gb|EAO13942.1| SNF2-related [Xylella fastidiosa Dixon] gi|71729900|gb|EAO31996.1| SNF2-related [Xylella fastidiosa Ann-1] Length = 472 Score = 259 bits (663), Expect = 1e-67, Method: Compositional matrix adjust. Identities = 119/201 (59%), Positives = 159/201 (79%), Gaps = 2/201 (0%) Query: 2 KQYHKFQRELYCDLQ-GENIEAFNSASKTVKCLQLANGAVYYDEEKH-WKEVHDEKIKAL 59 + Y +++++ L+ G +EAFN+ASKT+KCLQLANGA+Y D+ + W+ VHD K++AL Sbjct: 257 RLYKAMEQDMFIALECGAEVEAFNAASKTIKCLQLANGALYTDDTRQAWEVVHDAKLEAL 316 Query: 60 EVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASC 119 IIE+A P++VAYHF SD+ARLQ+AFP+GR LDK+P TI++WN G IP+LFAHPAS Sbjct: 317 HDIIEEAAGMPVLVAYHFKSDVARLQRAFPKGRALDKNPDTIRDWNAGNIPVLFAHPASA 376 Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 GHGLNLQ GGNIL FF WWDLE++QQ+IERIG TRQ QAG R VF+++++A NT+DEL Sbjct: 377 GHGLNLQDGGNILAFFGHWWDLEQYQQIIERIGPTRQAQAGHTRPVFIHHIVAANTVDEL 436 Query: 180 VLQRLRTKSTIQDLLLNALKK 200 V+ R +K +QDLLL A+K+ Sbjct: 437 VMARRESKREVQDLLLEAVKR 457 >gi|170730331|ref|YP_001775764.1| hypothetical protein Xfasm12_1183 [Xylella fastidiosa M12] gi|167965124|gb|ACA12134.1| conserved hypothetical protein [Xylella fastidiosa M12] Length = 295 Score = 259 bits (661), Expect = 2e-67, Method: Compositional matrix adjust. Identities = 118/199 (59%), Positives = 157/199 (78%), Gaps = 2/199 (1%) Query: 4 YHKFQRELYCDLQ-GENIEAFNSASKTVKCLQLANGAVYYDEEKH-WKEVHDEKIKALEV 61 Y +++++ L+ G +EAFN+ASKT+KCLQLANGA+Y D+ + W+ VHD K++AL Sbjct: 82 YKAMEQDMFIALECGAEVEAFNAASKTIKCLQLANGALYTDDTRQAWEVVHDAKLEALHD 141 Query: 62 IIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGH 121 IIE+A P++VAYHF SD+ARLQ+AFP+GR LDK+P TI++WN G IP+LFAHPAS GH Sbjct: 142 IIEEAAGMPVLVAYHFKSDVARLQRAFPKGRALDKNPDTIRDWNAGNIPVLFAHPASAGH 201 Query: 122 GLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVL 181 GLNLQ GGNIL FF WWDLE++QQ+IERIG TRQ QAG R VF+++++A T+DELV+ Sbjct: 202 GLNLQDGGNILAFFGHWWDLEQYQQIIERIGPTRQAQAGHTRPVFIHHIVAAGTVDELVM 261 Query: 182 QRLRTKSTIQDLLLNALKK 200 R +K +QDLLL A+K+ Sbjct: 262 ARRESKREVQDLLLEAVKR 280 >gi|71898924|ref|ZP_00681091.1| SNF2-related [Xylella fastidiosa Ann-1] gi|71731336|gb|EAO33400.1| SNF2-related [Xylella fastidiosa Ann-1] Length = 472 Score = 258 bits (660), Expect = 3e-67, Method: Compositional matrix adjust. Identities = 119/202 (58%), Positives = 158/202 (78%), Gaps = 2/202 (0%) Query: 2 KQYHKFQRELYCDLQ-GENIEAFNSASKTVKCLQLANGAVYYDEEKH-WKEVHDEKIKAL 59 + Y +++++ L+ G +EAFN+ASKT+KCLQLANGA+Y D+ + W+ VHD K++AL Sbjct: 257 RLYKAMEQDMFIALECGAEVEAFNAASKTIKCLQLANGALYTDDTRQAWEVVHDAKLEAL 316 Query: 60 EVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASC 119 IIE+A P++VAYHF SD+ARLQ+AFP+GR LDK P TI++WN G IP+LFAHPAS Sbjct: 317 HDIIEEAAGMPVLVAYHFKSDVARLQRAFPKGRALDKHPDTIRDWNAGNIPVLFAHPASA 376 Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 GHGLNLQ GGNILVFF WWDLE++QQ+IERIG TRQ QAG R VF+++++A T+DEL Sbjct: 377 GHGLNLQDGGNILVFFGHWWDLEQYQQIIERIGPTRQAQAGHTRPVFIHHIVAAGTVDEL 436 Query: 180 VLQRLRTKSTIQDLLLNALKKE 201 V+ R +K +QDLLL A+K+ Sbjct: 437 VMARRESKREVQDLLLEAVKRR 458 >gi|71901323|ref|ZP_00683419.1| SNF2-related [Xylella fastidiosa Ann-1] gi|71728907|gb|EAO31042.1| SNF2-related [Xylella fastidiosa Ann-1] Length = 472 Score = 258 bits (659), Expect = 3e-67, Method: Compositional matrix adjust. Identities = 119/202 (58%), Positives = 158/202 (78%), Gaps = 2/202 (0%) Query: 2 KQYHKFQRELYCDLQ-GENIEAFNSASKTVKCLQLANGAVYYDEEKH-WKEVHDEKIKAL 59 + Y +++++ L+ G +EAFN+ASKT+KCLQLANGA+Y D+ + W+ VHD K++AL Sbjct: 257 RLYKAMEQDMFIALECGAEVEAFNAASKTIKCLQLANGALYTDDTRQAWEVVHDAKLEAL 316 Query: 60 EVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASC 119 IIE+A P++VAYHF SD+ARLQ+AFP+GR LDK P TI++WN G IP+LFAHPAS Sbjct: 317 HDIIEEAAGMPVLVAYHFKSDVARLQRAFPKGRALDKHPDTIRDWNAGNIPVLFAHPASA 376 Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 GHGLNLQ GGNIL FF WWDLE++QQ+IERIG TRQ QAG KR VF+++++A T+DEL Sbjct: 377 GHGLNLQDGGNILAFFGHWWDLEQYQQIIERIGPTRQAQAGHKRPVFIHHIVAAGTVDEL 436 Query: 180 VLQRLRTKSTIQDLLLNALKKE 201 V+ R +K +QDLLL A+K+ Sbjct: 437 VMARRESKREVQDLLLEAVKRR 458 >gi|71898992|ref|ZP_00681158.1| SNF2-related [Xylella fastidiosa Ann-1] gi|71731238|gb|EAO33303.1| SNF2-related [Xylella fastidiosa Ann-1] Length = 472 Score = 258 bits (659), Expect = 4e-67, Method: Compositional matrix adjust. Identities = 119/201 (59%), Positives = 158/201 (78%), Gaps = 2/201 (0%) Query: 2 KQYHKFQRELYCDLQ-GENIEAFNSASKTVKCLQLANGAVYYDEEKH-WKEVHDEKIKAL 59 + Y +++++ L+ G +EAFN+ASKT+KCLQLANGA+Y D+ + W+ VHD K++AL Sbjct: 257 RLYKAMEQDMFIALECGAEVEAFNAASKTIKCLQLANGALYTDDTRQAWEVVHDAKLEAL 316 Query: 60 EVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASC 119 IIE+A P++VAYHF SD+ARLQ+AFP+GR LDK P TI++WN G IP+LFAHPAS Sbjct: 317 HDIIEEAAGMPVLVAYHFKSDVARLQRAFPKGRALDKHPETIRDWNAGNIPVLFAHPASA 376 Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 GHGLNLQ GGNIL FF WWDLE++QQ+IERIG TRQ QAG KR VF+++++A T+DEL Sbjct: 377 GHGLNLQDGGNILAFFGHWWDLEQYQQIIERIGPTRQAQAGHKRPVFIHHIVAAGTVDEL 436 Query: 180 VLQRLRTKSTIQDLLLNALKK 200 V+ R +K +QDLLL A+K+ Sbjct: 437 VMARRESKREVQDLLLEAVKR 457 >gi|170729638|ref|YP_001775071.1| hypothetical protein Xfasm12_0427 [Xylella fastidiosa M12] gi|167964431|gb|ACA11441.1| conserved hypothetical protein [Xylella fastidiosa M12] Length = 472 Score = 258 bits (658), Expect = 4e-67, Method: Compositional matrix adjust. Identities = 118/202 (58%), Positives = 158/202 (78%), Gaps = 2/202 (0%) Query: 2 KQYHKFQRELYCDLQ-GENIEAFNSASKTVKCLQLANGAVYYDEEKH-WKEVHDEKIKAL 59 + Y +++++ L+ G +EAFN+ASKT+KCLQLANGA+Y D+ + W+ VHD K++AL Sbjct: 257 RLYKAMEQDMFIALECGAEVEAFNAASKTIKCLQLANGALYTDDTRQAWEVVHDAKLEAL 316 Query: 60 EVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASC 119 IIE+A P++VAYHF SD+ARLQ+AFP+GR LDK+P TI++WN G IP+LFAHPAS Sbjct: 317 HDIIEEAAGMPVLVAYHFKSDVARLQRAFPKGRALDKNPDTIRDWNAGNIPVLFAHPASA 376 Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 GHGLNLQ GGNIL FF WWDLE++QQ+IERIG TRQ QAG R VF+++++A T+DEL Sbjct: 377 GHGLNLQDGGNILAFFGHWWDLEQYQQIIERIGPTRQAQAGHTRPVFIHHIVAAGTVDEL 436 Query: 180 VLQRLRTKSTIQDLLLNALKKE 201 V+ R +K +QDLLL A+K+ Sbjct: 437 VMARRESKREVQDLLLEAVKRR 458 >gi|71275472|ref|ZP_00651758.1| SNF2-related [Xylella fastidiosa Dixon] gi|71163772|gb|EAO13488.1| SNF2-related [Xylella fastidiosa Dixon] Length = 472 Score = 258 bits (658), Expect = 5e-67, Method: Compositional matrix adjust. Identities = 118/202 (58%), Positives = 158/202 (78%), Gaps = 2/202 (0%) Query: 2 KQYHKFQRELYCDLQ-GENIEAFNSASKTVKCLQLANGAVYYDEEKH-WKEVHDEKIKAL 59 + Y +++++ L+ G +EAFN+ASKT+KCLQLANGA+Y D+ + W+ VHD K++AL Sbjct: 257 RLYKAMEQDMFIALECGAEVEAFNAASKTIKCLQLANGALYTDDTRQAWEVVHDAKLEAL 316 Query: 60 EVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASC 119 IIE+A P++VAYHF SD+ARLQ+AFP+GR LDK+P TI++WN G IP+LFAHPAS Sbjct: 317 HDIIEEAAGMPVLVAYHFKSDVARLQRAFPKGRALDKNPDTIRDWNAGNIPVLFAHPASA 376 Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 GHGLNLQ GGNIL FF WWDLE++QQ+IERIG TRQ QAG R VF+++++A T+DEL Sbjct: 377 GHGLNLQDGGNILAFFGHWWDLEQYQQIIERIGPTRQAQAGHTRPVFIHHIVAAGTVDEL 436 Query: 180 VLQRLRTKSTIQDLLLNALKKE 201 V+ R +K +QDLLL A+K+ Sbjct: 437 VMARRESKREVQDLLLEAVKRR 458 >gi|212499736|ref|YP_002308544.1| DEAD box helicase [Bacteriophage APSE-2] gi|238898727|ref|YP_002924408.1| APSE-2 prophage; DEAD box helicase [Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum)] gi|75906050|gb|ABA29396.1| DEAD box helicase [Bacteriophage APSE-2] gi|211731705|gb|ACJ10193.1| DEAD box helicase [Bacteriophage APSE-2] gi|229466486|gb|ACQ68260.1| APSE-2 prophage; DEAD box helicase [Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum)] Length = 460 Score = 257 bits (657), Expect = 5e-67, Method: Compositional matrix adjust. Identities = 113/199 (56%), Positives = 154/199 (77%) Query: 3 QYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVI 62 Y ++EL+ +L IEA N+A+KT+K LQ+A GA+Y D+ +W +HD KI+ALE I Sbjct: 262 HYQAMEKELFLELGDSAIEALNAAAKTIKTLQIAAGAIYSDDNHNWTAIHDAKIQALESI 321 Query: 63 IEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHG 122 + ++ P++VAYH+ DL RL KAFP+G+ LD +P T+ WN GKIPLLFAHPASCGHG Sbjct: 322 VNESGGTPVLVAYHWKHDLERLLKAFPKGKMLDANPQTLTNWNSGKIPLLFAHPASCGHG 381 Query: 123 LNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQ 182 LNLQ GGNILVFFS WWDLE++QQ+IERIG TRQ QAG R VF+++++A++T+DE+V++ Sbjct: 382 LNLQDGGNILVFFSHWWDLEQYQQIIERIGPTRQAQAGHNRPVFIHHIVAKDTLDEVVME 441 Query: 183 RLRTKSTIQDLLLNALKKE 201 R +K IQDLLL A+K++ Sbjct: 442 RRNSKRAIQDLLLEAMKRK 460 >gi|71902063|ref|ZP_00684103.1| SNF2-related [Xylella fastidiosa Ann-1] gi|71728174|gb|EAO30365.1| SNF2-related [Xylella fastidiosa Ann-1] Length = 472 Score = 257 bits (657), Expect = 5e-67, Method: Compositional matrix adjust. Identities = 118/202 (58%), Positives = 158/202 (78%), Gaps = 2/202 (0%) Query: 2 KQYHKFQRELYCDLQ-GENIEAFNSASKTVKCLQLANGAVYYDEEKH-WKEVHDEKIKAL 59 + Y +++++ L+ G +EAFN+ASKT+KCLQLANGA+Y D+ + W+ VHD K++AL Sbjct: 257 RLYKAMEQDMFIALECGAEVEAFNAASKTIKCLQLANGALYTDDTRQAWEVVHDAKLEAL 316 Query: 60 EVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASC 119 IIE+A P++VAYHF SD+ARLQ+AFP+GR LDK+P TI++WN G IP+LFAHPAS Sbjct: 317 HDIIEEAAGMPVLVAYHFKSDVARLQRAFPKGRALDKNPDTIRDWNAGNIPVLFAHPASA 376 Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 GHGLNLQ GGNIL FF WWDLE++QQ+IERIG TRQ QAG R VF+++++A T+DEL Sbjct: 377 GHGLNLQDGGNILAFFGHWWDLEQYQQIIERIGPTRQAQAGHTRPVFIHHIVAAGTVDEL 436 Query: 180 VLQRLRTKSTIQDLLLNALKKE 201 V+ R +K +QDLLL A+K+ Sbjct: 437 VMARRESKREVQDLLLEAVKRR 458 >gi|71901494|ref|ZP_00683581.1| SNF2-related [Xylella fastidiosa Ann-1] gi|71728750|gb|EAO30894.1| SNF2-related [Xylella fastidiosa Ann-1] Length = 464 Score = 257 bits (656), Expect = 7e-67, Method: Compositional matrix adjust. Identities = 118/202 (58%), Positives = 159/202 (78%), Gaps = 2/202 (0%) Query: 2 KQYHKFQRELYCDLQ-GENIEAFNSASKTVKCLQLANGAVYYDEEKH-WKEVHDEKIKAL 59 + Y +++++ L+ G +EAFN+ASKT+KCLQLANGA+Y D+ + W+ VHD K++AL Sbjct: 257 RLYKAMEQDMFIALECGAEVEAFNAASKTIKCLQLANGALYTDDTRQAWEVVHDAKLEAL 316 Query: 60 EVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASC 119 IIE+A P++VAYHF SD+ARLQ+AFP+GR LDK P TI++WN G IP+LFAHPAS Sbjct: 317 HDIIEEAAGMPVLVAYHFKSDVARLQRAFPKGRALDKHPDTIRDWNAGNIPVLFAHPASA 376 Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 GHGLNLQ GGNILVFF WWDLE++QQ+IERIG TRQ QAG R VF+++++A T+DEL Sbjct: 377 GHGLNLQDGGNILVFFGHWWDLEQYQQIIERIGPTRQAQAGHTRPVFIHHIVAAGTVDEL 436 Query: 180 VLQRLRTKSTIQDLLLNALKKE 201 V+ R +K +QDLLL A++++ Sbjct: 437 VMARRESKREVQDLLLEAVRRK 458 >gi|273810423|ref|YP_003344894.1| helicase [Xylella phage Xfas53] gi|257097798|gb|ACV41104.1| helicase [Xylella phage Xfas53] Length = 472 Score = 257 bits (656), Expect = 7e-67, Method: Compositional matrix adjust. Identities = 118/202 (58%), Positives = 158/202 (78%), Gaps = 2/202 (0%) Query: 2 KQYHKFQRELYCDLQ-GENIEAFNSASKTVKCLQLANGAVYYDEEKH-WKEVHDEKIKAL 59 + Y +++++ L+ G +EAFN+ASKT+KCLQLANGA+Y D+ + W+ VHD K++AL Sbjct: 257 RLYKAMEQDMFIALECGAEVEAFNAASKTIKCLQLANGALYTDDTRQAWEVVHDAKLEAL 316 Query: 60 EVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASC 119 IIE+A P++VAYHF SD+ARLQ+AFP+GR LDK P TI++WN G IP+LFAHPAS Sbjct: 317 HDIIEEAAGMPVLVAYHFKSDVARLQRAFPKGRALDKHPDTIRDWNAGNIPVLFAHPASA 376 Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 GHGLNLQ GGNIL FF WWDLE++QQ+IERIG TRQ QAG +R VF+++++A T+DEL Sbjct: 377 GHGLNLQDGGNILAFFGHWWDLEQYQQIIERIGPTRQAQAGHQRPVFIHHIVAAGTVDEL 436 Query: 180 VLQRLRTKSTIQDLLLNALKKE 201 V+ R +K +QDLLL A+K+ Sbjct: 437 VMARRESKREVQDLLLEAVKRR 458 >gi|28199605|ref|NP_779919.1| hypothetical protein PD1730 [Xylella fastidiosa Temecula1] gi|182682346|ref|YP_001830506.1| SNF2-related protein [Xylella fastidiosa M23] gi|28057720|gb|AAO29568.1| phage-related protein [Xylella fastidiosa Temecula1] gi|182632456|gb|ACB93232.1| SNF2-related protein [Xylella fastidiosa M23] gi|307578627|gb|ADN62596.1| SNF2-related protein [Xylella fastidiosa subsp. fastidiosa GB514] Length = 472 Score = 257 bits (656), Expect = 8e-67, Method: Compositional matrix adjust. Identities = 118/201 (58%), Positives = 158/201 (78%), Gaps = 2/201 (0%) Query: 2 KQYHKFQRELYCDLQ-GENIEAFNSASKTVKCLQLANGAVYYDEEKH-WKEVHDEKIKAL 59 + Y +++++ L+ G +EAFN+ASKT+KCLQLANGA+Y D+ + W+ VHD K++AL Sbjct: 257 RLYKAMEQDMFIALECGAEVEAFNAASKTIKCLQLANGALYTDDTRQAWEVVHDAKLEAL 316 Query: 60 EVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASC 119 IIE+A P++VAYHF SD+ARLQ+AFP+GR LDK P TI++WN G IP+LFAHPAS Sbjct: 317 HDIIEEAAGMPVLVAYHFKSDVARLQRAFPKGRALDKHPDTIRDWNAGNIPVLFAHPASA 376 Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 GHGLNLQ GGNIL FF WWDLE++QQ+IERIG TRQ QAG +R VF+++++A T+DEL Sbjct: 377 GHGLNLQDGGNILAFFGHWWDLEQYQQIIERIGPTRQAQAGHQRPVFIHHIVAAGTVDEL 436 Query: 180 VLQRLRTKSTIQDLLLNALKK 200 V+ R +K +QDLLL A+K+ Sbjct: 437 VMARRESKREVQDLLLEAVKR 457 >gi|28198299|ref|NP_778613.1| hypothetical protein PD0382 [Xylella fastidiosa Temecula1] gi|28199082|ref|NP_779396.1| hypothetical protein PD1194 [Xylella fastidiosa Temecula1] gi|182680936|ref|YP_001829096.1| SNF2-related protein [Xylella fastidiosa M23] gi|182681808|ref|YP_001829968.1| SNF2-related protein [Xylella fastidiosa M23] gi|28056369|gb|AAO28262.1| phage-related protein [Xylella fastidiosa Temecula1] gi|28057180|gb|AAO29045.1| phage-related protein [Xylella fastidiosa Temecula1] gi|182631046|gb|ACB91822.1| SNF2-related protein [Xylella fastidiosa M23] gi|182631918|gb|ACB92694.1| SNF2-related protein [Xylella fastidiosa M23] gi|307579404|gb|ADN63373.1| SNF2-related protein [Xylella fastidiosa subsp. fastidiosa GB514] Length = 472 Score = 257 bits (656), Expect = 9e-67, Method: Compositional matrix adjust. Identities = 118/202 (58%), Positives = 157/202 (77%), Gaps = 2/202 (0%) Query: 2 KQYHKFQRELYCDLQ-GENIEAFNSASKTVKCLQLANGAVYYDEEKH-WKEVHDEKIKAL 59 + Y +++++ L+ G +EAFN+ASKT+KCLQLANGA+Y D+ + W+ VHD K++AL Sbjct: 257 RLYKAMEQDMFIALECGAEVEAFNAASKTIKCLQLANGALYTDDTRQAWEVVHDAKLEAL 316 Query: 60 EVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASC 119 IIE+A P++VAYHF SD+ARLQ+AFP+GR LDK P TI++WN G IP+LFAHPAS Sbjct: 317 HDIIEEAAGMPVLVAYHFKSDVARLQRAFPKGRALDKHPDTIRDWNAGNIPVLFAHPASA 376 Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 GHGLNLQ GGNIL FF WWDLE++QQ+IERIG TRQ QAG R VF+++++A T+DEL Sbjct: 377 GHGLNLQDGGNILAFFGHWWDLEQYQQIIERIGPTRQAQAGHTRPVFIHHIVAAGTVDEL 436 Query: 180 VLQRLRTKSTIQDLLLNALKKE 201 V+ R +K +QDLLL A+K+ Sbjct: 437 VMARRESKREVQDLLLEAVKRR 458 >gi|71899887|ref|ZP_00682035.1| SNF2-related [Xylella fastidiosa Ann-1] gi|71730327|gb|EAO32410.1| SNF2-related [Xylella fastidiosa Ann-1] Length = 472 Score = 256 bits (655), Expect = 1e-66, Method: Compositional matrix adjust. Identities = 118/202 (58%), Positives = 157/202 (77%), Gaps = 2/202 (0%) Query: 2 KQYHKFQRELYCDLQ-GENIEAFNSASKTVKCLQLANGAVYYDEEKH-WKEVHDEKIKAL 59 + Y +++++ L+ G +EAFN+ASKT+KCLQLANGA+Y D+ + W+ VHD K++AL Sbjct: 257 RLYKAMEQDMFIALECGAEVEAFNAASKTIKCLQLANGALYTDDTRQAWEVVHDAKLEAL 316 Query: 60 EVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASC 119 IIE+A P++VAYHF SD+ARLQ+AFP+GR LDK P TI++WN G IP+LFAHPAS Sbjct: 317 HDIIEEAAGMPVLVAYHFKSDVARLQRAFPKGRALDKHPDTIRDWNAGNIPVLFAHPASA 376 Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 GHGLNLQ GGNIL FF WWDLE++QQ+IERIG TRQ QAG R VF+++++A T+DEL Sbjct: 377 GHGLNLQDGGNILAFFGHWWDLEQYQQIIERIGPTRQAQAGHTRPVFIHHIVAAGTVDEL 436 Query: 180 VLQRLRTKSTIQDLLLNALKKE 201 V+ R +K +QDLLL A+K+ Sbjct: 437 VMARRESKREVQDLLLEAVKRR 458 >gi|28199029|ref|NP_779343.1| hypothetical protein PD1137 [Xylella fastidiosa Temecula1] gi|182681751|ref|YP_001829911.1| SNF2-related protein [Xylella fastidiosa M23] gi|28057127|gb|AAO28992.1| phage-related protein [Xylella fastidiosa Temecula1] gi|182631861|gb|ACB92637.1| SNF2-related protein [Xylella fastidiosa M23] gi|307580180|gb|ADN64149.1| SNF2-related protein [Xylella fastidiosa subsp. fastidiosa GB514] Length = 472 Score = 256 bits (655), Expect = 1e-66, Method: Compositional matrix adjust. Identities = 118/202 (58%), Positives = 157/202 (77%), Gaps = 2/202 (0%) Query: 2 KQYHKFQRELYCDLQ-GENIEAFNSASKTVKCLQLANGAVYYDEEKH-WKEVHDEKIKAL 59 + Y +++++ L+ G +EAFN+ASKT+KCLQLANGA+Y D+ + W+ VHD K++AL Sbjct: 257 RLYKAMEQDMFIALECGAEVEAFNAASKTIKCLQLANGALYTDDTRQAWEVVHDAKLEAL 316 Query: 60 EVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASC 119 IIE+A P++VAYHF SD+ARLQ+AFP+GR LDK P TI++WN G IP+LFAHPAS Sbjct: 317 HDIIEEAAGMPVLVAYHFKSDVARLQRAFPKGRALDKHPDTIRDWNAGNIPVLFAHPASA 376 Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 GHGLNLQ GGNIL FF WWDLE++QQ+IERIG TRQ QAG R VF+++++A T+DEL Sbjct: 377 GHGLNLQDGGNILAFFGHWWDLEQYQQIIERIGPTRQAQAGHTRPVFIHHIVAAGTVDEL 436 Query: 180 VLQRLRTKSTIQDLLLNALKKE 201 V+ R +K +QDLLL A+K+ Sbjct: 437 VMARRESKREVQDLLLEAVKRR 458 >gi|15837282|ref|NP_297970.1| hypothetical protein XF0680 [Xylella fastidiosa 9a5c] gi|9105562|gb|AAF83490.1|AE003912_2 phage-related protein [Xylella fastidiosa 9a5c] Length = 472 Score = 256 bits (654), Expect = 1e-66, Method: Compositional matrix adjust. Identities = 117/202 (57%), Positives = 157/202 (77%), Gaps = 2/202 (0%) Query: 2 KQYHKFQRELYCDLQ-GENIEAFNSASKTVKCLQLANGAVYYDEEKH-WKEVHDEKIKAL 59 + Y ++E++ L+ G +EAFN+ASKT+KCLQLANGA+Y D+ + W+ VHD K++AL Sbjct: 257 RLYKAMEQEMFIALECGAEVEAFNAASKTIKCLQLANGALYTDDTRQAWEVVHDAKLEAL 316 Query: 60 EVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASC 119 IIE+A P++VAYHF SD+ RLQ+AFP+GR LD+ P TI++WN G IP+LFAHPAS Sbjct: 317 HEIIEEAAGMPVLVAYHFKSDVTRLQRAFPKGRVLDQHPDTIRDWNAGNIPVLFAHPASA 376 Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 GHGLNLQ GGNIL FF WWDLE++QQ++ERIG TRQ QAG R VF+++++A NT+DEL Sbjct: 377 GHGLNLQDGGNILAFFGHWWDLEQYQQIVERIGPTRQAQAGHDRPVFIHHIVAANTVDEL 436 Query: 180 VLQRLRTKSTIQDLLLNALKKE 201 V+ R +K +QDLLL A+K+ Sbjct: 437 VMARRESKREVQDLLLEAVKRS 458 >gi|48697218|ref|YP_024948.1| putative helicase protein [Burkholderia phage BcepC6B] gi|47779024|gb|AAT38387.1| gp28 [Burkholderia phage BcepC6B] Length = 459 Score = 254 bits (649), Expect = 5e-66, Method: Compositional matrix adjust. Identities = 117/202 (57%), Positives = 156/202 (77%), Gaps = 5/202 (2%) Query: 4 YHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEK-----HWKEVHDEKIKA 58 Y +R+++ ++ IEA N+ASKT+KCLQLANGAVY E+ W EVHD K++A Sbjct: 254 YRDMERQMFMEIDDSPIEAMNAASKTMKCLQLANGAVYKQEDDGSDTAPWHEVHDLKLQA 313 Query: 59 LEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPAS 118 LE I+E+A P++VAYHF SDLARLQ+AFP+GR LD++P TI++WN GKIP++FAHPAS Sbjct: 314 LEEIVEEAAGMPVLVAYHFKSDLARLQRAFPRGRQLDQNPQTIRDWNAGKIPVMFAHPAS 373 Query: 119 CGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDE 178 GHGLNLQ GGNIL F WW+LEE+ Q++ERIG RQ QAG +R VF+Y +IA++TIDE Sbjct: 374 AGHGLNLQDGGNILAVFGHWWNLEEYLQIVERIGPVRQLQAGHRRPVFIYPIIARDTIDE 433 Query: 179 LVLQRLRTKSTIQDLLLNALKK 200 V++R TK +QD+LL+A+K+ Sbjct: 434 DVVERRETKRAVQDILLDAMKR 455 >gi|15839118|ref|NP_299806.1| hypothetical protein XF2528 [Xylella fastidiosa 9a5c] gi|9107736|gb|AAF85326.1|AE004060_1 phage-related protein [Xylella fastidiosa 9a5c] Length = 472 Score = 251 bits (641), Expect = 4e-65, Method: Compositional matrix adjust. Identities = 116/201 (57%), Positives = 155/201 (77%), Gaps = 2/201 (0%) Query: 2 KQYHKFQRELYCDLQ-GENIEAFNSASKTVKCLQLANGAVYYDEEKH-WKEVHDEKIKAL 59 + Y ++E+ L+ G +EAFN+ASKT+KCLQLANGA+Y D+ + W+ VHD K++AL Sbjct: 257 RLYKTMEQEMLIALECGAEVEAFNAASKTIKCLQLANGALYTDDTRQAWEVVHDAKLEAL 316 Query: 60 EVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASC 119 IIE+A P++VAYHF SD+ARLQ+AFP+GR LD+ P T+++WN G IP+LF HPAS Sbjct: 317 HEIIEEAAGMPVLVAYHFKSDVARLQRAFPKGRVLDQHPDTLRDWNAGNIPVLFVHPASA 376 Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 GHGLNLQ GGNIL FF WWDLE++QQ+IERIG TRQ QAG R VF+++++A T+DEL Sbjct: 377 GHGLNLQDGGNILAFFGHWWDLEQYQQIIERIGPTRQAQAGHDRPVFIHHIVAAGTVDEL 436 Query: 180 VLQRLRTKSTIQDLLLNALKK 200 V+ R +K +QDLLL A+K+ Sbjct: 437 VMARRESKREVQDLLLEAVKR 457 >gi|320182116|gb|EFW57020.1| DNA polymerase, phage-associated [Shigella boydii ATCC 9905] Length = 533 Score = 250 bits (638), Expect = 8e-65, Method: Compositional matrix adjust. Identities = 112/186 (60%), Positives = 152/186 (81%) Query: 18 ENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHF 77 E IEA N+A+KT+KCLQ+A+GAVY D+ W E+HD K++AL+ I+ +A AP++VAYH+ Sbjct: 347 EGIEAPNAAAKTLKCLQIASGAVYTDDAGSWSELHDTKLQALDSILTEAAGAPVLVAYHW 406 Query: 78 NSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSL 137 DL RL KAFP+GR LD+DP T+++WN GKIP+LFAHPAS GHGLN+Q GG ILVFFS Sbjct: 407 KHDLERLLKAFPRGRHLDQDPQTLRDWNSGKIPVLFAHPASAGHGLNMQDGGYILVFFSH 466 Query: 138 WWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 WWDLE++QQ+IERIG TRQ QAG R VF++++IA +T+DE+V+++ +K T+QD+LL+A Sbjct: 467 WWDLEQYQQIIERIGPTRQIQAGHNRPVFIHHIIAADTMDEMVMEQRNSKRTVQDILLDA 526 Query: 198 LKKETI 203 +KK I Sbjct: 527 MKKRGI 532 >gi|194432044|ref|ZP_03064333.1| Bbp42 [Shigella dysenteriae 1012] gi|194419573|gb|EDX35653.1| Bbp42 [Shigella dysenteriae 1012] gi|332089212|gb|EGI94319.1| DNA polymerase [Shigella dysenteriae 155-74] Length = 449 Score = 249 bits (635), Expect = 2e-64, Method: Compositional matrix adjust. Identities = 111/186 (59%), Positives = 152/186 (81%) Query: 18 ENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHF 77 E IEA N+A+KT+KCLQ+A+GAVY D+ W E+HD K++AL+ I+ +A AP++VAYH+ Sbjct: 263 EGIEAPNAAAKTLKCLQIASGAVYTDDAGSWSELHDTKLQALDSILTEAAGAPVLVAYHW 322 Query: 78 NSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSL 137 DL RL KAFP+GR LD+DP T+++WN GKIP+LFAHPAS GHGLN+Q GG ILVFFS Sbjct: 323 KHDLERLLKAFPRGRHLDQDPQTLRDWNSGKIPVLFAHPASAGHGLNMQDGGYILVFFSH 382 Query: 138 WWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 WWDLE++QQ+IERIG TRQ QAG R VF++++IA +T+DE+V+++ +K T+Q++LL+A Sbjct: 383 WWDLEQYQQIIERIGPTRQIQAGHNRPVFIHHIIAADTMDEMVMEQRNSKRTVQNILLDA 442 Query: 198 LKKETI 203 +KK I Sbjct: 443 MKKRGI 448 >gi|211731857|gb|ACJ10155.1| DEAD box helicase [Bacteriophage APSE-3] Length = 440 Score = 245 bits (625), Expect = 3e-63, Method: Compositional matrix adjust. Identities = 105/179 (58%), Positives = 144/179 (80%) Query: 3 QYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVI 62 YH ++EL+ +L IEA N+A+KT+K LQ+A+GA+Y D+ ++W E+HD KI+ALE I Sbjct: 262 HYHAMEKELFLELGESAIEALNAAAKTIKILQIASGAIYSDDNRNWTEIHDAKIQALESI 321 Query: 63 IEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHG 122 + ++ P++VAYH+ DL RL KAFP+G+ LD +P T+ +WN GKIPLLFAHPASCGHG Sbjct: 322 VNESGGTPVLVAYHWKHDLERLLKAFPKGKNLDANPRTLTDWNNGKIPLLFAHPASCGHG 381 Query: 123 LNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVL 181 LNLQ GGNILVFFS WWDLE++QQ+IERIG TRQ QAG R VF+++++A++T+DE+V+ Sbjct: 382 LNLQDGGNILVFFSHWWDLEQYQQIIERIGPTRQAQAGHNRPVFIHHIVAKDTLDEVVM 440 >gi|211731851|gb|ACJ10150.1| DEAD box helicase [Bacteriophage APSE-4] Length = 442 Score = 243 bits (619), Expect = 2e-62, Method: Compositional matrix adjust. Identities = 104/181 (57%), Positives = 143/181 (79%) Query: 3 QYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVI 62 YH ++EL+ +L IEA N+A+KT+K LQ+A+GA+Y D+ +W +HD KI+ALE I Sbjct: 262 HYHAMEKELFLELGESAIEALNAAAKTIKILQIASGAIYSDDNHNWTAIHDAKIQALESI 321 Query: 63 IEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHG 122 + ++ P++VAYH+ DL RL KAFP+G+ LD +P T+ WN GK+PLLFAHPASCGHG Sbjct: 322 VNESGGTPVLVAYHWKHDLERLLKAFPKGKMLDTNPQTLTNWNSGKVPLLFAHPASCGHG 381 Query: 123 LNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQ 182 LNLQ GGNILVFFS WWDLE++QQ+IERIG TRQ QAG R VF+++++A++T+DE+V++ Sbjct: 382 LNLQDGGNILVFFSHWWDLEQYQQIIERIGPTRQAQAGHNRPVFIHHIVAKDTLDEVVME 441 Query: 183 R 183 R Sbjct: 442 R 442 >gi|159146252|gb|ABW90589.1| DEAD box helicase [Bacteriophage APSE-2] gi|159146254|gb|ABW90590.1| DEAD box helicase [Bacteriophage APSE-2] gi|159146256|gb|ABW90591.1| DEAD box helicase [Bacteriophage APSE-2] Length = 295 Score = 242 bits (618), Expect = 2e-62, Method: Compositional matrix adjust. Identities = 105/178 (58%), Positives = 143/178 (80%) Query: 3 QYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVI 62 YH ++EL+ +L IEA N+A+KT+K LQ+A+GA+Y D+ ++W E+HD KI+ALE I Sbjct: 118 HYHAMEKELFLELGESAIEALNAAAKTIKILQIASGAIYSDDNRNWTEIHDAKIQALESI 177 Query: 63 IEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHG 122 + ++ P++VAYH+ DL RL KAFP+G+ LD +P T+ +WN GKIPLLFAHPASCGHG Sbjct: 178 VNESGGTPVLVAYHWKHDLERLLKAFPKGKNLDANPRTLTDWNNGKIPLLFAHPASCGHG 237 Query: 123 LNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELV 180 LNLQ GGNILVFFS WWDLE++QQ+IERIG TRQ QAG R VF+++++A++T+DE+V Sbjct: 238 LNLQDGGNILVFFSHWWDLEQYQQIIERIGPTRQAQAGHNRPVFIHHIVAKDTLDEVV 295 >gi|159146264|gb|ABW90595.1| DEAD box helicase [Bacteriophage APSE-2] Length = 295 Score = 238 bits (608), Expect = 2e-61, Method: Compositional matrix adjust. Identities = 104/178 (58%), Positives = 140/178 (78%) Query: 3 QYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVI 62 YH ++EL+ +L IEA N+A+KT+K LQ+A+GA+Y D+ +W +HD KI+ALE I Sbjct: 118 HYHAMEKELFLELSDSAIEALNAAAKTIKNLQIASGAIYSDDNHNWTAIHDAKIQALESI 177 Query: 63 IEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHG 122 + ++ P++VAYH+ DL RL KAFP+G+ LD +P T+ WN GKIPLLFAHPASCGHG Sbjct: 178 VNESGGTPVLVAYHWKHDLERLLKAFPKGKMLDANPQTLTNWNSGKIPLLFAHPASCGHG 237 Query: 123 LNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELV 180 LNLQ GGNILVFFS WWDLE++QQ+IERIG TRQ QAG R VF+++++A++T+DE+V Sbjct: 238 LNLQDGGNILVFFSHWWDLEQYQQIIERIGPTRQAQAGHNRPVFIHHIVAKDTLDEVV 295 >gi|159146260|gb|ABW90593.1| DEAD box helicase [Bacteriophage APSE-2] Length = 295 Score = 238 bits (606), Expect = 4e-61, Method: Compositional matrix adjust. Identities = 104/179 (58%), Positives = 141/179 (78%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEV 61 + Y ++EL+ +L IEA N+A+KT+K LQ+A+GA+Y D+ ++W E+HD KI+ LE Sbjct: 117 EHYQAMEKELFLELGESAIEALNAAAKTIKILQIASGAIYSDDNRNWTEIHDAKIQVLES 176 Query: 62 IIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGH 121 I+ +A P++VAYH+ DL RL KAFP+G+ LD +P T+ WN GKIPLLFAHPASCGH Sbjct: 177 IVNEAGGMPVLVAYHWKHDLERLLKAFPKGKMLDANPQTLTNWNSGKIPLLFAHPASCGH 236 Query: 122 GLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELV 180 GLNLQ GGNILVFFS WWDLE++QQ+IERIG TRQ QAG R VF+++++A++T+DE+V Sbjct: 237 GLNLQDGGNILVFFSHWWDLEQYQQIIERIGPTRQAQAGHNRPVFIHHIVAKDTLDEVV 295 >gi|211731841|gb|ACJ10144.1| DEAD box helicase [Bacteriophage APSE-5] Length = 440 Score = 238 bits (606), Expect = 5e-61, Method: Compositional matrix adjust. Identities = 103/179 (57%), Positives = 140/179 (78%) Query: 3 QYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVI 62 Y ++EL+ +L IEA N+A+KT+K LQ+A+GA+Y D+ +W +HD KI+ALE I Sbjct: 262 HYQAMEKELFLELGDSAIEALNAAAKTIKNLQIASGAIYSDDNHNWTAIHDAKIQALESI 321 Query: 63 IEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHG 122 + ++ P++VAYH+ DL RL KAFP+G+ LD +P T+ WN GKIPLLFAHPASCGHG Sbjct: 322 VNESGGTPVLVAYHWKHDLERLLKAFPKGKMLDANPQTLTNWNSGKIPLLFAHPASCGHG 381 Query: 123 LNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVL 181 LNLQ GGNILVFFS WWDLE++QQ+IERIG TRQ QAG R VF+++++A++T+DE+V+ Sbjct: 382 LNLQDGGNILVFFSHWWDLEQYQQIIERIGPTRQAQAGHNRPVFIHHIVAKDTLDEVVM 440 >gi|159146258|gb|ABW90592.1| DEAD box helicase [Bacteriophage APSE-2] Length = 295 Score = 238 bits (606), Expect = 5e-61, Method: Compositional matrix adjust. Identities = 103/178 (57%), Positives = 140/178 (78%) Query: 3 QYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVI 62 YH ++EL+ +L IEA N+A+KT+K LQ+A+GA+Y D+ +W +HD KI+ALE I Sbjct: 118 HYHAMEKELFLELGESAIEALNAAAKTIKILQIASGAIYSDDNHNWTAIHDAKIQALESI 177 Query: 63 IEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHG 122 + ++ P++VAYH+ DL RL KAFP+G+ LD +P T+ WN GK+PLLFAHPASCGHG Sbjct: 178 VNESGGTPVLVAYHWKHDLERLLKAFPKGKMLDTNPQTLTNWNSGKVPLLFAHPASCGHG 237 Query: 123 LNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELV 180 LNLQ GGNILVFFS WWDLE++QQ+IERIG TRQ QAG R VF+++++A++T+DE+V Sbjct: 238 LNLQDGGNILVFFSHWWDLEQYQQIIERIGPTRQAQAGHNRPVFIHHIVAKDTLDEVV 295 >gi|159146262|gb|ABW90594.1| DEAD box helicase [Bacteriophage APSE-2] Length = 295 Score = 235 bits (600), Expect = 2e-60, Method: Compositional matrix adjust. Identities = 103/178 (57%), Positives = 139/178 (78%) Query: 3 QYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVI 62 Y ++EL+ +L IEA N+A+KT+K LQ+A+GA+Y D+ +W +HD KI+ALE I Sbjct: 118 HYQAMEKELFLELGDSAIEALNAAAKTIKNLQIASGAIYSDDNHNWTAIHDAKIQALESI 177 Query: 63 IEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHG 122 + ++ P++VAYH+ DL RL KAFP+G+ LD +P T+ WN GKIPLLFAHPASCGHG Sbjct: 178 VNESGGTPVLVAYHWKHDLERLLKAFPKGKMLDANPQTLTNWNSGKIPLLFAHPASCGHG 237 Query: 123 LNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELV 180 LNLQ GGNILVFFS WWDLE++QQ+IERIG TRQ QAG R VF+++++A++T+DE+V Sbjct: 238 LNLQDGGNILVFFSHWWDLEQYQQIIERIGPTRQAQAGHNRPVFIHHIVAKDTLDEVV 295 >gi|273810587|ref|YP_003344968.1| gp33 [Sodalis phage SO-1] gi|258619872|gb|ACV84125.1| gp33 [Sodalis phage SO-1] Length = 474 Score = 204 bits (520), Expect = 4e-51, Method: Compositional matrix adjust. Identities = 103/206 (50%), Positives = 138/206 (66%), Gaps = 8/206 (3%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEK-----HWKEVHDEKI 56 K Y +F+ EL+ +L+ +EA N+ASKT+KCLQLA+GAVY +E W ++HD K+ Sbjct: 263 KIYDQFESELFAELESGTVEAANAASKTIKCLQLASGAVYKVDEDGERTDEWVKIHDAKL 322 Query: 57 KALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDP---CTIQEWNEGKIPLLF 113 ALE I+E+ N AP++VAY + DLARL+K FP G L K ++ WN G+IP++F Sbjct: 323 DALESIVEELNGAPLLVAYQYKHDLARLKKKFPHGVALGKGKQGNKDMEAWNRGEIPIMF 382 Query: 114 AHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQ 173 AHPAS GHGLNLQ GG+ L FS W+ E Q++ERIG RQ QAG R VFVY + A+ Sbjct: 383 AHPASAGHGLNLQDGGHHLAIFSDTWNFEHFSQIVERIGPVRQMQAGHPRPVFVYIIQAR 442 Query: 174 NTIDELVLQRLRTKSTIQDLLLNALK 199 T+DELV +R +K IQD L+ +K Sbjct: 443 GTLDELVAERRDSKRDIQDDLMEYMK 468 >gi|225220074|ref|YP_002720041.1| helicase [Enterobacteria phage SSL-2009a] gi|224986015|gb|ACN74579.1| helicase [Enterobacteria phage SSL-2009a] Length = 474 Score = 202 bits (514), Expect = 2e-50, Method: Compositional matrix adjust. Identities = 102/206 (49%), Positives = 138/206 (66%), Gaps = 8/206 (3%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEK-----HWKEVHDEKI 56 K Y +F+ EL+ +L+ +EA N+ASKT+KCLQLA+GAVY +E W ++HD K+ Sbjct: 263 KIYDQFEAELFAELESGTVEAANAASKTIKCLQLASGAVYKVDEDGERTDEWVKIHDAKL 322 Query: 57 KALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDP---CTIQEWNEGKIPLLF 113 ALE I+E+ N AP++VAY + DLARL+K FP G + K ++ WN G+IP++F Sbjct: 323 DALESIVEELNGAPLLVAYQYKHDLARLKKKFPHGVAMGKGKQGNKDMEAWNRGEIPIMF 382 Query: 114 AHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQ 173 AHPAS GHGLNLQ GG+ L FS W+ E Q++ERIG RQ QAG R VFVY + A+ Sbjct: 383 AHPASAGHGLNLQDGGHHLAIFSDTWNYEHFAQIVERIGPIRQMQAGHPRPVFVYIIQAR 442 Query: 174 NTIDELVLQRLRTKSTIQDLLLNALK 199 T+DELV +R +K IQD L+ +K Sbjct: 443 GTLDELVAERRDSKRDIQDDLMEYMK 468 >gi|318064550|gb|ADV36504.1| helicase [Edwardsiella phage eiMSLS] Length = 449 Score = 195 bits (495), Expect = 3e-48, Method: Compositional matrix adjust. Identities = 95/208 (45%), Positives = 135/208 (64%), Gaps = 8/208 (3%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYY-----DEEKHWKEVHDEKI 56 K Y + L+ +L+ IEA N+A+KT KCLQ+A GA Y + K W E+H K+ Sbjct: 238 KIYDDMENALFAELESGEIEASNAAAKTAKCLQIAGGACYITTDDGEASKEWTEIHKAKL 297 Query: 57 KALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD---PCTIQEWNEGKIPLLF 113 ALE IIE+ N +P++VAY + DL RL K FPQGR + K + +WN GK+P++F Sbjct: 298 DALESIIEELNGSPLLVAYQYKHDLVRLLKRFPQGRAMRKGLKGNNDMADWNAGKVPIMF 357 Query: 114 AHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQ 173 HPAS GHGLNLQ GG L FF+ W+ E++ Q++ERIG RQ QAG R V++Y + A+ Sbjct: 358 VHPASAGHGLNLQDGGCHLAFFNDTWNYEQYAQIVERIGPVRQHQAGHPRTVYIYIIQAR 417 Query: 174 NTIDELVLQRLRTKSTIQDLLLNALKKE 201 T+DE+V R K+ +QDLL++ +K++ Sbjct: 418 GTLDEVVALRRDDKAEVQDLLMDYMKRK 445 >gi|318064334|gb|ADV36398.1| helicase [Edwardsiella phage eiAU] Length = 449 Score = 195 bits (495), Expect = 3e-48, Method: Compositional matrix adjust. Identities = 95/208 (45%), Positives = 135/208 (64%), Gaps = 8/208 (3%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYY-----DEEKHWKEVHDEKI 56 K Y + L+ +L+ IEA N+A+KT KCLQ+A GA Y + K W E+H K+ Sbjct: 238 KIYDDMENALFAELESGEIEASNAAAKTAKCLQIAGGACYITTDDGEASKEWTEIHKAKL 297 Query: 57 KALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD---PCTIQEWNEGKIPLLF 113 ALE IIE+ N +P++VAY + DL RL K FPQGR + K + +WN GK+P++F Sbjct: 298 DALESIIEELNGSPLLVAYQYKHDLVRLLKRFPQGRAMRKGLKGNNDMADWNAGKVPIMF 357 Query: 114 AHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQ 173 HPAS GHGLNLQ GG L FF+ W+ E++ Q++ERIG RQ QAG R V++Y + A+ Sbjct: 358 VHPASAGHGLNLQDGGCHLAFFNDTWNYEQYAQIVERIGPVRQHQAGHPRTVYIYIIQAR 417 Query: 174 NTIDELVLQRLRTKSTIQDLLLNALKKE 201 T+DE+V R K+ +QDLL++ +K++ Sbjct: 418 GTLDEVVALRRDDKAEVQDLLMDYMKRK 445 >gi|318064442|gb|ADV36452.1| helicase [Edwardsiella phage eiDWF] Length = 449 Score = 195 bits (495), Expect = 4e-48, Method: Compositional matrix adjust. Identities = 95/208 (45%), Positives = 135/208 (64%), Gaps = 8/208 (3%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYY-----DEEKHWKEVHDEKI 56 K Y + L+ +L+ IEA N+A+KT KCLQ+A GA Y + K W E+H K+ Sbjct: 238 KIYDDMENALFAELESGEIEASNAAAKTAKCLQIAGGACYITTDDGEASKEWTEIHKAKL 297 Query: 57 KALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD---PCTIQEWNEGKIPLLF 113 ALE IIE+ N +P++VAY + DL RL K FPQGR + K + +WN GK+P++F Sbjct: 298 DALESIIEELNGSPLLVAYQYKHDLVRLLKRFPQGRAMRKGLKGNNDMADWNAGKVPIMF 357 Query: 114 AHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQ 173 HPAS GHGLNLQ GG L FF+ W+ E++ Q++ERIG RQ QAG R V++Y + A+ Sbjct: 358 XHPASAGHGLNLQDGGCHLAFFNDTWNYEQYAQIVERIGPVRQHQAGHPRTVYIYIIQAR 417 Query: 174 NTIDELVLQRLRTKSTIQDLLLNALKKE 201 T+DE+V R K+ +QDLL++ +K++ Sbjct: 418 GTLDEVVALRRDDKAEVQDLLMDYMKRK 445 >gi|309702946|emb|CBJ02277.1| putative phage protein [Escherichia coli ETEC H10407] Length = 134 Score = 192 bits (488), Expect = 2e-47, Method: Compositional matrix adjust. Identities = 85/133 (63%), Positives = 112/133 (84%) Query: 71 IIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGN 130 ++VAYH+ DL RL KAFP+GR LD+DP T+++WN GKIP+LFAHPAS GHGLN+Q GGN Sbjct: 1 MLVAYHWKHDLERLLKAFPRGRHLDQDPQTLRDWNSGKIPVLFAHPASAGHGLNMQDGGN 60 Query: 131 ILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 ILVFFS WWDLE++QQ+IERIG TRQ QAG R VF++++IA +T+DE+V++R +K T+ Sbjct: 61 ILVFFSHWWDLEQYQQIIERIGPTRQIQAGHNRPVFIHHIIAADTMDEMVMERRNSKRTV 120 Query: 191 QDLLLNALKKETI 203 QD+LL+A+KK I Sbjct: 121 QDILLDAMKKRGI 133 >gi|160898846|ref|YP_001564428.1| helicase-like protein [Delftia acidovorans SPH-1] gi|160364430|gb|ABX36043.1| helicase-like protein [Delftia acidovorans SPH-1] Length = 477 Score = 189 bits (481), Expect = 1e-46, Method: Compositional matrix adjust. Identities = 92/200 (46%), Positives = 138/200 (69%), Gaps = 2/200 (1%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEV 61 +QY + REL ++ G+ IEAF++ +K+ K LQ+A+GA Y D++ W VHDEKI+AL+ Sbjct: 275 RQYDEMARELATEIDGQVIEAFSAGTKSQKLLQIASGAAYTDDQGAWALVHDEKIEALKS 334 Query: 62 IIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGH 121 ++E+A P++V YHF SDLAR++KAFP+ RTLD D +++ G++ +L HPAS GH Sbjct: 335 VVEEALGMPLLVFYHFKSDLARIRKAFPKARTLD-DKGAKEDFEAGRLQMLVVHPASAGH 393 Query: 122 GLN-LQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELV 180 G++ LQ+G VFFS W E Q IERIG TRQ Q+G+ R V V+ L+A++T++E Sbjct: 394 GVDGLQHGTCQCVFFSTNWSAENDAQAIERIGPTRQMQSGYDRPVTVHRLVARDTVEESA 453 Query: 181 LQRLRTKSTIQDLLLNALKK 200 + RLR++ ++ + L LKK Sbjct: 454 MYRLRSRVSVDEALRQGLKK 473 >gi|62327356|ref|YP_224069.1| hypothetical protein BPKS7gp47 [Salmonella phage SS3e] gi|57472390|gb|AAW51252.1| hypothetical protein [Salmonella phage SS3e] Length = 474 Score = 187 bits (476), Expect = 6e-46, Method: Compositional matrix adjust. Identities = 92/205 (44%), Positives = 137/205 (66%), Gaps = 8/205 (3%) Query: 4 YHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYY-----DEEKHWKEVHDEKIKA 58 Y + +L+ +L+ +EA N+A+KT KCLQ+A+GAVY + K W++VHD K+ A Sbjct: 266 YIDMEEKLFAELESGEVEAANAAAKTSKCLQIASGAVYVSGPDGEATKEWEKVHDTKLDA 325 Query: 59 LEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCT---IQEWNEGKIPLLFAH 115 LE I+E+ AP++VAY F +L R+ K FPQ + K ++ WN G+I +L H Sbjct: 326 LESIVEELQGAPLLVAYQFKHELERILKRFPQAQAFSKGAKGNKQMESWNRGEIEILCVH 385 Query: 116 PASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNT 175 PAS GHGLNLQ GG+ L F S W+LE + Q++ERIG RQ+QAG +R VF+Y+++A++T Sbjct: 386 PASAGHGLNLQDGGHHLAFISQGWNLEHYLQVVERIGPVRQKQAGHERPVFLYHIVAKDT 445 Query: 176 IDELVLQRLRTKSTIQDLLLNALKK 200 +DE+V R K ++Q+ LLN +K+ Sbjct: 446 LDEVVAARTDEKKSVQEELLNYMKR 470 >gi|282535269|gb|ADA82475.1| putative helicase [Escherichia phage K1ind3] gi|282547318|gb|ADA82375.1| putative helicase [Escherichia phage K1ind1] gi|282547370|gb|ADA82426.1| putative helicase [Escherichia phage K1ind2] Length = 474 Score = 186 bits (473), Expect = 1e-45, Method: Compositional matrix adjust. Identities = 92/205 (44%), Positives = 137/205 (66%), Gaps = 8/205 (3%) Query: 4 YHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYY-----DEEKHWKEVHDEKIKA 58 Y + +L+ +L+ +EA N+A+KT KCLQ+A+GAVY + K W++VHD K+ A Sbjct: 266 YIDMEEKLFAELESGEVEAANAAAKTSKCLQIASGAVYVSGPDGEATKDWEKVHDTKLDA 325 Query: 59 LEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCT---IQEWNEGKIPLLFAH 115 LE I+E+ AP++VAY F +L R+ K FPQ + K ++ WN G+I +L H Sbjct: 326 LESIVEELQGAPLLVAYQFKHELERILKRFPQAQAFAKGAKGNKQMEAWNRGEIEILCVH 385 Query: 116 PASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNT 175 PAS GHGLNLQ GG+ L F S W+LE + Q++ERIG RQ+QAG +R VF+Y+++A++T Sbjct: 386 PASAGHGLNLQDGGHHLAFISQGWNLEHYLQVVERIGPVRQKQAGHERPVFLYHIVAKDT 445 Query: 176 IDELVLQRLRTKSTIQDLLLNALKK 200 +DE+V R K ++Q+ LLN +K+ Sbjct: 446 LDEVVAARTDEKKSVQEELLNYMKR 470 >gi|282534217|gb|ADA82325.1| putative helicase [Escherichia phage K1H] Length = 477 Score = 186 bits (472), Expect = 2e-45, Method: Compositional matrix adjust. Identities = 92/205 (44%), Positives = 137/205 (66%), Gaps = 8/205 (3%) Query: 4 YHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYY-----DEEKHWKEVHDEKIKA 58 Y + +L+ +L+ +EA N+A+KT KCLQ+A+GAVY + K W++VHD K+ A Sbjct: 269 YIDMEEKLFAELESGEVEAANAAAKTSKCLQIASGAVYVSGPDGEATKDWEKVHDTKLDA 328 Query: 59 LEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCT---IQEWNEGKIPLLFAH 115 LE I+E+ AP++VAY F +L R+ K FPQ + K ++ WN G+I +L H Sbjct: 329 LESIVEELQGAPLLVAYQFKHELERILKRFPQAQAFAKGAKGNKQMEAWNRGEIEILCVH 388 Query: 116 PASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNT 175 PAS GHGLNLQ GG+ L F S W+LE + Q++ERIG RQ+QAG +R VF+Y+++A++T Sbjct: 389 PASAGHGLNLQDGGHHLAFISQGWNLEHYLQVVERIGPVRQKQAGHERPVFLYHIVAKDT 448 Query: 176 IDELVLQRLRTKSTIQDLLLNALKK 200 +DE+V R K ++Q+ LLN +K+ Sbjct: 449 LDEVVAARTDEKKSVQEELLNYMKR 473 >gi|282533166|gb|ADA82275.1| putative helicase [Escherichia phage K1G] Length = 474 Score = 186 bits (472), Expect = 2e-45, Method: Compositional matrix adjust. Identities = 92/205 (44%), Positives = 137/205 (66%), Gaps = 8/205 (3%) Query: 4 YHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYY-----DEEKHWKEVHDEKIKA 58 Y + +L+ +L+ +EA N+A+KT KCLQ+A+GAVY + K W++VHD K+ A Sbjct: 266 YIDMEEKLFAELESGEVEAANAAAKTSKCLQIASGAVYVSGPDGEATKDWEKVHDMKLDA 325 Query: 59 LEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCT---IQEWNEGKIPLLFAH 115 LE I+E+ AP++VAY F +L R+ K FPQ + K ++ WN G+I +L H Sbjct: 326 LESIVEELQGAPLLVAYQFKHELERILKRFPQAQAFAKGAKGNKQMEAWNRGEIEILCVH 385 Query: 116 PASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNT 175 PAS GHGLNLQ GG+ L F S W+LE + Q++ERIG RQ+QAG +R VF+Y+++A++T Sbjct: 386 PASAGHGLNLQDGGHHLAFISQGWNLEHYLQVVERIGPVRQKQAGHERPVFLYHIVAKDT 445 Query: 176 IDELVLQRLRTKSTIQDLLLNALKK 200 +DE+V R K ++Q+ LLN +K+ Sbjct: 446 LDEVVAARTDEKKSVQEELLNYMKR 470 >gi|71276170|ref|ZP_00652450.1| SNF2-related [Xylella fastidiosa Dixon] gi|71898329|ref|ZP_00680502.1| SNF2-related [Xylella fastidiosa Ann-1] gi|170730598|ref|YP_001776031.1| hypothetical protein Xfasm12_1485 [Xylella fastidiosa M12] gi|71163088|gb|EAO12810.1| SNF2-related [Xylella fastidiosa Dixon] gi|71731852|gb|EAO33910.1| SNF2-related [Xylella fastidiosa Ann-1] gi|167965391|gb|ACA12401.1| conserved hypothetical protein [Xylella fastidiosa M12] Length = 470 Score = 185 bits (470), Expect = 3e-45, Method: Compositional matrix adjust. Identities = 94/197 (47%), Positives = 130/197 (65%), Gaps = 13/197 (6%) Query: 2 KQYHKFQRELYCDLQ-GENIEAFNSASKTVKCLQLANGAVYYDEEKH-WKEVHDEKIKAL 59 + Y +++++ L+ G +EAFN+ SKT+KCLQLANGA+Y D+ + W+ VHD K++AL Sbjct: 257 RLYKAMEQDMFIALECGTEVEAFNATSKTIKCLQLANGALYTDDTRQAWEVVHDAKLEAL 316 Query: 60 EVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASC 119 IIE+A P++VAYHF SD+ARLQ+AFP+GR LDK+P TI++WN G IP+LFAHPAS Sbjct: 317 HDIIEEAAGMPVLVAYHFKSDVARLQRAFPKGRALDKNPDTIRDWNAGNIPVLFAHPASA 376 Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT----------RQRQAGFKRAVFVYY 169 GHGLNLQ GGNIL FF WW + ++ V R+R A R V Y Sbjct: 377 GHGLNLQDGGNILAFFGHWWAQVRNGVLMRTCTVCGGSGTVPISDRKRAAALGRDVSTYC 436 Query: 170 LIAQNTIDELVLQRLRT 186 + + + E +L++LR Sbjct: 437 MRWRG-LYEWLLEKLRA 452 >gi|134288567|ref|YP_001110806.1| putative helicase [Salmonella phage SETP3] gi|125631932|gb|ABN47335.1| putative helicase [Salmonella phage SETP3] Length = 821 Score = 185 bits (469), Expect = 3e-45, Method: Compositional matrix adjust. Identities = 91/205 (44%), Positives = 137/205 (66%), Gaps = 8/205 (3%) Query: 4 YHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYY-----DEEKHWKEVHDEKIKA 58 Y + +L+ +L+ +EA N+A+KT KCLQ+A+GAVY + K W++VHD K+ A Sbjct: 613 YIDMEEKLFAELESGEVEAANAAAKTSKCLQIASGAVYVSGPDGEATKDWEKVHDTKLDA 672 Query: 59 LEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCT---IQEWNEGKIPLLFAH 115 LE I+E+ AP++VAY F +L R+ + FPQ + K ++ WN G+I +L H Sbjct: 673 LESIVEELQGAPLLVAYQFKHELERILRRFPQAQAFAKGAKGNKQMESWNRGEIEILCVH 732 Query: 116 PASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNT 175 PAS GHGLNLQ GG+ L F S W+LE + Q++ERIG RQ+QAG +R VF+Y+++A++T Sbjct: 733 PASAGHGLNLQDGGHHLAFISQGWNLEHYLQVVERIGPVRQKQAGHERPVFLYHIVAKDT 792 Query: 176 IDELVLQRLRTKSTIQDLLLNALKK 200 +DE+V R K ++Q+ LLN +K+ Sbjct: 793 LDEVVAARTDEKKSVQEELLNYMKR 817 >gi|15838886|ref|NP_299574.1| hypothetical protein XF2295 [Xylella fastidiosa 9a5c] gi|9107459|gb|AAF85094.1|AE004041_6 phage-related protein [Xylella fastidiosa 9a5c] Length = 470 Score = 184 bits (466), Expect = 9e-45, Method: Compositional matrix adjust. Identities = 90/179 (50%), Positives = 120/179 (67%), Gaps = 12/179 (6%) Query: 2 KQYHKFQRELYCDLQ-GENIEAFNSASKTVKCLQLANGAVYYDEEKH-WKEVHDEKIKAL 59 + Y ++E++ L+ G +EAFN+ASKT+KCLQLANGA+Y D+ + W+ VHD K++AL Sbjct: 257 RLYKAMEQEMFIALECGAEVEAFNAASKTIKCLQLANGALYTDDTRQAWEVVHDAKLEAL 316 Query: 60 EVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASC 119 IIE+A P++VAYHF SD+ARLQ+AFP+GR LD+ P T+++WN G IP+LFAHPAS Sbjct: 317 HEIIEEAAGMPVLVAYHFKSDVARLQRAFPKGRVLDQHPDTLRDWNAGNIPVLFAHPASA 376 Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT----------RQRQAGFKRAVFVY 168 GHGLNLQ GGNIL FF WW + ++ V R+R A R V Y Sbjct: 377 GHGLNLQDGGNILAFFGHWWAQVRNGVLMRTCTVCGGSGTVPISERKRAAALGRDVSTY 435 >gi|331007741|ref|ZP_08330867.1| hypothetical protein IMCC1989_1942 [gamma proteobacterium IMCC1989] gi|330418449|gb|EGG92989.1| hypothetical protein IMCC1989_1942 [gamma proteobacterium IMCC1989] Length = 479 Score = 179 bits (455), Expect = 2e-43, Method: Compositional matrix adjust. Identities = 88/184 (47%), Positives = 125/184 (67%), Gaps = 5/184 (2%) Query: 18 ENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHF 77 E IE N+A+ + K LQ +NGA+Y +++ HW+ VHD K+ ALE II++A P++VAY++ Sbjct: 277 ETIEVLNAAALSNKLLQFSNGAIYTNDQGHWEAVHDLKLSALEEIIQEAAGQPVLVAYNY 336 Query: 78 NSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSL 137 SDLAR+++ FPQ + +I WN GKI LL AHPAS GHGLNLQ+GGN +V+F L Sbjct: 337 KSDLARIKEHFPQAECITDSEDSIDRWNAGKISLLLAHPASAGHGLNLQHGGNTIVWFGL 396 Query: 138 WWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 W LE +QQ R+ RQ G + V +++L+ +IDE V++ L++K T Q LLNA Sbjct: 397 NWSLELYQQFNARL----HRQ-GQTKPVIIHHLVVNGSIDETVIEALKSKKTTQKALLNA 451 Query: 198 LKKE 201 LKK+ Sbjct: 452 LKKD 455 >gi|300933380|ref|ZP_07148636.1| phage-associated protein [Corynebacterium resistens DSM 45100] Length = 454 Score = 167 bits (423), Expect = 7e-40, Method: Compositional matrix adjust. Identities = 92/200 (46%), Positives = 126/200 (63%), Gaps = 7/200 (3%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEV 61 K Y + + E+ DL G+ I+A N+A+ + K LQLA+GA+Y DEE + VHD K+ ALE Sbjct: 254 KAYERLRDEMVLDLDGQVIDAANAAALSGKLLQLASGAIY-DEEGNTVVVHDRKLDALED 312 Query: 62 IIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGH 121 ++E AN P++VAY F D R+ + PQ R L I+ WNEG IPL HPAS GH Sbjct: 313 LVEAANGQPLLVAYWFKHDRQRITERLPQARELTTS-ADIEAWNEGGIPLALIHPASAGH 371 Query: 122 GLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVL 181 GLNLQ GGN+LV+FSL W LE +QQ R+ RQ G + V + +L + +T+DE VL Sbjct: 372 GLNLQQGGNLLVWFSLTWSLELYQQTNARL----YRQ-GQDQPVTITHLASADTLDEAVL 426 Query: 182 QRLRTKSTIQDLLLNALKKE 201 L +K+ IQ L++A+ E Sbjct: 427 AALESKNDIQSALIDAVTSE 446 >gi|325687762|gb|EGD29783.1| SNF2 domain protein [Streptococcus sanguinis SK72] Length = 450 Score = 167 bits (422), Expect = 9e-40, Method: Compositional matrix adjust. Identities = 89/198 (44%), Positives = 131/198 (66%), Gaps = 7/198 (3%) Query: 4 YHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVII 63 Y +F+ E+ L+G+ ++A NSAS + K LQ+ANG +Y DE + +HD+K+ ALE ++ Sbjct: 252 YKEFKAEMVVSLKGQVLDAVNSASLSNKLLQMANGMIY-DENRDTVLLHDQKLVALEEMV 310 Query: 64 EKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGL 123 E N P++VAY F DL R+++ FP+ R + + I+EWN+GKIPL HPAS GHGL Sbjct: 311 ESMNGRPLLVAYWFQHDLKRIKERFPEARVIQSNQ-DIEEWNKGKIPLGLIHPASSGHGL 369 Query: 124 NLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQR 183 NLQ GG+ + +F L W LE +QQ+ R+ RQ G K V V+++I +NTIDE V++R Sbjct: 370 NLQAGGHTICWFGLTWSLELYQQLNARL----WRQ-GQKETVVVHHIITKNTIDEQVMKR 424 Query: 184 LRTKSTIQDLLLNALKKE 201 L+ K Q L++A+K E Sbjct: 425 LKEKDISQQSLIDAVKYE 442 >gi|257088837|ref|ZP_05583198.1| conserved hypothetical protein [Enterococcus faecalis CH188] gi|256997649|gb|EEU84169.1| conserved hypothetical protein [Enterococcus faecalis CH188] Length = 430 Score = 167 bits (422), Expect = 1e-39, Method: Compositional matrix adjust. Identities = 89/198 (44%), Positives = 127/198 (64%), Gaps = 6/198 (3%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEV 61 KQY + +RE +L+G ++ A N+A+ + K LQL+NGAVY DE +E+H EK+ ALE Sbjct: 227 KQYKELEREYVLELEGTDVVASNAATLSNKLLQLSNGAVY-DENGDGREIHQEKLNALER 285 Query: 62 IIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGH 121 +IE A ++V Y + DL R+Q F Q + L+ I++WNEGKIPLL AHP S GH Sbjct: 286 VIEDAQGQSVLVFYQYQHDLERIQARFKQAKALNVSDGDIEKWNEGKIPLLLAHPQSAGH 345 Query: 122 GLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVL 181 GLNLQ GG+I+V+F L W LE +QQ R+ RQ Q + V +++L+ + TIDE V+ Sbjct: 346 GLNLQKGGHIIVWFGLTWSLEFYQQANARL--DRQGQT---QPVIIHHLVTKGTIDEQVI 400 Query: 182 QRLRTKSTIQDLLLNALK 199 + L+ K Q L+ A+K Sbjct: 401 KALQAKEQGQSALMAAVK 418 >gi|281416462|ref|YP_003347382.1| DNA helicase [Enterococcus phage phiFL4A] gi|270209638|gb|ACZ64177.1| DNA helicase [Enterococcus phage phiFL4A] gi|315160593|gb|EFU04610.1| protein, SNF2 family [Enterococcus faecalis TX0645] gi|315579439|gb|EFU91630.1| protein, SNF2 family [Enterococcus faecalis TX0630] Length = 459 Score = 166 bits (421), Expect = 2e-39, Method: Compositional matrix adjust. Identities = 89/198 (44%), Positives = 127/198 (64%), Gaps = 6/198 (3%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEV 61 KQY + +RE +L+G ++ A N+A+ + K LQL+NGAVY DE +E+H EK+ ALE Sbjct: 256 KQYKELEREYVLELEGTDVVASNAATLSNKLLQLSNGAVY-DENGDGREIHQEKLNALER 314 Query: 62 IIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGH 121 +IE A ++V Y + DL R+Q F Q + L+ I++WNEGKIPLL AHP S GH Sbjct: 315 VIEDAQGQSVLVFYQYQHDLERIQARFKQAKALNVSDGDIEKWNEGKIPLLLAHPQSAGH 374 Query: 122 GLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVL 181 GLNLQ GG+I+V+F L W LE +QQ R+ RQ Q + V +++L+ + TIDE V+ Sbjct: 375 GLNLQKGGHIIVWFGLTWSLEFYQQANARL--DRQGQT---QPVIIHHLVTKGTIDEQVI 429 Query: 182 QRLRTKSTIQDLLLNALK 199 + L+ K Q L+ A+K Sbjct: 430 KALQAKEQGQSALMAAVK 447 >gi|29374969|ref|NP_814122.1| SNF2 domain-containing protein [Enterococcus faecalis V583] gi|29342427|gb|AAO80193.1| SNF2 domain protein [Enterococcus faecalis V583] Length = 457 Score = 163 bits (412), Expect = 1e-38, Method: Compositional matrix adjust. Identities = 88/198 (44%), Positives = 126/198 (63%), Gaps = 6/198 (3%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEV 61 KQY + +RE +L+G ++ A N+A+ + K LQL+NGAVY DE +E+H EK+ ALE Sbjct: 254 KQYKELEREYVLELEGTDVVASNAATLSNKLLQLSNGAVY-DENGDGREIHQEKLNALER 312 Query: 62 IIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGH 121 +IE A ++V Y + DL R+Q F Q + L+ I++WNEGKI LL AHP S GH Sbjct: 313 VIEDAQGQSVLVFYQYQHDLERIQARFKQAKALNVSDGDIEKWNEGKISLLLAHPQSAGH 372 Query: 122 GLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVL 181 GLNLQ GG+I+V+F L W LE +QQ R+ RQ Q + V +++L+ + TIDE V+ Sbjct: 373 GLNLQKGGHIIVWFGLTWSLEFYQQANARL--DRQGQT---QPVIIHHLVTKGTIDEQVI 427 Query: 182 QRLRTKSTIQDLLLNALK 199 + L+ K Q L+ A+K Sbjct: 428 KALQAKEQGQSALMAAVK 445 >gi|227520161|ref|ZP_03950210.1| helicase [Enterococcus faecalis TX0104] gi|227072406|gb|EEI10369.1| helicase [Enterococcus faecalis TX0104] gi|315574062|gb|EFU86253.1| protein, SNF2 family [Enterococcus faecalis TX0309B] gi|315582007|gb|EFU94198.1| protein, SNF2 family [Enterococcus faecalis TX0309A] Length = 455 Score = 162 bits (411), Expect = 2e-38, Method: Compositional matrix adjust. Identities = 88/198 (44%), Positives = 126/198 (63%), Gaps = 6/198 (3%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEV 61 KQY + +RE +L+ ++ A N+A+ + K LQL+NGAVY DE +E+H EK+ ALE Sbjct: 256 KQYKELEREYVLELEETDVVASNAATLSNKLLQLSNGAVY-DENGDGREIHQEKLNALER 314 Query: 62 IIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGH 121 +IE A ++V Y + DL R+Q F Q + L+ I++WNEGKIPLL AHP S GH Sbjct: 315 VIEDAQGQSVLVFYQYQHDLERIQARFKQAKALNVSDGDIEKWNEGKIPLLLAHPQSAGH 374 Query: 122 GLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVL 181 GLNLQ GG+I+V+F L W LE +QQ R+ RQ G + V +++L+ + TIDE V+ Sbjct: 375 GLNLQKGGHIIVWFGLTWSLEFYQQANARL----DRQ-GQTQPVIIHHLVTKGTIDEQVI 429 Query: 182 QRLRTKSTIQDLLLNALK 199 + L+ K Q L+ A+K Sbjct: 430 KALQAKEQGQSALMAAVK 447 >gi|306826832|ref|ZP_07460132.1| SNF2 domain protein [Streptococcus pyogenes ATCC 10782] gi|304430850|gb|EFM33859.1| SNF2 domain protein [Streptococcus pyogenes ATCC 10782] Length = 440 Score = 162 bits (410), Expect = 3e-38, Method: Compositional matrix adjust. Identities = 88/201 (43%), Positives = 127/201 (63%), Gaps = 10/201 (4%) Query: 1 MKQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 MK Y + + +L + + + I A NSA K LQ+ANGA+Y D++K +HD+K+ ALE Sbjct: 247 MKAYKQLEADLVLEFKNKEISAANSAVLANKLLQMANGAIY-DDDKATVAIHDDKLDALE 305 Query: 61 VIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCG 120 I+E++ PI+V Y + DL RL+K FPQ L ++ +WN GKIP+L HP S G Sbjct: 306 NIVEESQGQPILVFYQYQHDLERLKKRFPQAEEL----TSVDKWNSGKIPILLCHPQSAG 361 Query: 121 HGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELV 180 HGLNLQ GG+I+V+F L W LE +QQ R+ RQ Q V V++++A+NT+DE V Sbjct: 362 HGLNLQKGGHIIVWFGLTWSLEYYQQANARLD--RQGQT---EPVIVHHIVAENTVDEKV 416 Query: 181 LQRLRTKSTIQDLLLNALKKE 201 L+ L+ K Q+ LL A+K + Sbjct: 417 LRILQGKEKNQNALLEAVKAQ 437 >gi|139473885|ref|YP_001128601.1| SNF2 family phage protein [Streptococcus pyogenes str. Manfredo] gi|134272132|emb|CAM30377.1| SNF2 family phage protein [Streptococcus pyogenes str. Manfredo] Length = 440 Score = 162 bits (409), Expect = 3e-38, Method: Compositional matrix adjust. Identities = 88/201 (43%), Positives = 127/201 (63%), Gaps = 10/201 (4%) Query: 1 MKQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 MK Y + + +L + + + I A NSA K LQ+ANGA+Y D++K +HD+K+ ALE Sbjct: 247 MKAYKQLEADLVLEFKNKEISAANSAVLANKLLQMANGAIY-DDDKATVAIHDDKLDALE 305 Query: 61 VIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCG 120 I+E++ PI+V Y + DL RL+K FPQ L ++ +WN GKIP+L HP S G Sbjct: 306 NIVEESQGQPILVFYQYQHDLERLKKRFPQAEEL----TSVDKWNSGKIPILLCHPQSAG 361 Query: 121 HGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELV 180 HGLNLQ GG+I+V+F L W LE +QQ R+ RQ Q V V++++A+NT+DE V Sbjct: 362 HGLNLQKGGHIIVWFGLTWSLEYYQQANARLD--RQGQT---EPVIVHHIVAENTVDEKV 416 Query: 181 LQRLRTKSTIQDLLLNALKKE 201 L+ L+ K Q+ LL A+K + Sbjct: 417 LRILQGKEKNQNALLEAVKAQ 437 >gi|260579063|ref|ZP_05846962.1| SNF2 domain protein [Corynebacterium jeikeium ATCC 43734] gi|258602814|gb|EEW16092.1| SNF2 domain protein [Corynebacterium jeikeium ATCC 43734] Length = 453 Score = 161 bits (408), Expect = 4e-38, Method: Compositional matrix adjust. Identities = 91/197 (46%), Positives = 122/197 (61%), Gaps = 7/197 (3%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEV 61 K Y + + E+ DL G+ I+A N+A+ + K LQLA+GA+Y DE+ + VHD K+ ALE Sbjct: 254 KAYERLRDEMVLDLDGQVIDAANAAALSGKLLQLASGAIY-DEDGNTVVVHDRKLDALED 312 Query: 62 IIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGH 121 ++E AN P++VAY F DL R+ + FPQ R L I WN +IPL HPAS GH Sbjct: 313 LVEAANGQPLLVAYWFKHDLQRITERFPQARELTTS-TDIAAWNAREIPLALIHPASAGH 371 Query: 122 GLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVL 181 GLNLQ GGN+LV+FSL W LE +QQ R+ RQ G + V + +L A +T+DE VL Sbjct: 372 GLNLQQGGNLLVWFSLTWSLELYQQTNARL----YRQ-GQDQPVTITHLAADHTLDEAVL 426 Query: 182 QRLRTKSTIQDLLLNAL 198 L K Q L+NA+ Sbjct: 427 AALDNKDMTQAALINAV 443 >gi|28895337|ref|NP_801687.1| hypothetical protein SPs0425 [Streptococcus pyogenes SSI-1] gi|28810583|dbj|BAC63520.1| hypothetical protein (phage associated) [Streptococcus pyogenes SSI-1] Length = 442 Score = 161 bits (408), Expect = 4e-38, Method: Compositional matrix adjust. Identities = 87/201 (43%), Positives = 127/201 (63%), Gaps = 10/201 (4%) Query: 1 MKQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 MK Y + + +L + + + I A NSA K LQ+ANGA+Y D++K +HD+K+ ALE Sbjct: 249 MKAYKQLEADLVLEFKNKEISAANSAVLANKLLQMANGAIY-DDDKATVAIHDDKLDALE 307 Query: 61 VIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCG 120 ++E++ PI+V Y + DL RL+K FPQ L ++ +WN GKIP+L HP S G Sbjct: 308 NVVEESQGQPILVFYQYQHDLERLKKRFPQAEEL----TSVDKWNSGKIPILLCHPQSAG 363 Query: 121 HGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELV 180 HGLNLQ GG+I+V+F L W LE +QQ R+ RQ Q V V++++A+NT+DE V Sbjct: 364 HGLNLQKGGHIIVWFGLTWSLEYYQQANARL--DRQGQT---EPVIVHHIVAENTVDEKV 418 Query: 181 LQRLRTKSTIQDLLLNALKKE 201 L+ L+ K Q+ LL A+K + Sbjct: 419 LRILQGKEKNQNALLEAVKAQ 439 >gi|21910976|ref|NP_665244.1| putative helicase - phage associated [Streptococcus pyogenes MGAS315] gi|28876470|ref|NP_795678.1| putative helicase [Streptococcus pyogenes phage 315.6] gi|50913383|ref|YP_059355.1| Phage-related DNA helicase [Streptococcus pyogenes MGAS10394] gi|21905184|gb|AAM80047.1| putative helicase - phage-associated [Streptococcus pyogenes MGAS315] gi|50902457|gb|AAT86172.1| Phage-related DNA helicase [Streptococcus pyogenes MGAS10394] Length = 440 Score = 161 bits (408), Expect = 5e-38, Method: Compositional matrix adjust. Identities = 87/201 (43%), Positives = 127/201 (63%), Gaps = 10/201 (4%) Query: 1 MKQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 MK Y + + +L + + + I A NSA K LQ+ANGA+Y D++K +HD+K+ ALE Sbjct: 247 MKAYKQLEADLVLEFKNKEISAANSAVLANKLLQMANGAIY-DDDKATVAIHDDKLDALE 305 Query: 61 VIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCG 120 ++E++ PI+V Y + DL RL+K FPQ L ++ +WN GKIP+L HP S G Sbjct: 306 NVVEESQGQPILVFYQYQHDLERLKKRFPQAEEL----TSVDKWNSGKIPILLCHPQSAG 361 Query: 121 HGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELV 180 HGLNLQ GG+I+V+F L W LE +QQ R+ RQ Q V V++++A+NT+DE V Sbjct: 362 HGLNLQKGGHIIVWFGLTWSLEYYQQANARLD--RQGQT---EPVIVHHIVAENTVDEKV 416 Query: 181 LQRLRTKSTIQDLLLNALKKE 201 L+ L+ K Q+ LL A+K + Sbjct: 417 LRILQGKEKNQNALLEAVKAQ 437 >gi|225871338|ref|YP_002747285.1| SNF2 family phage protein [Streptococcus equi subsp. equi 4047] gi|225700742|emb|CAW95382.1| SNF2 family phage protein [Streptococcus equi subsp. equi 4047] Length = 440 Score = 161 bits (407), Expect = 5e-38, Method: Compositional matrix adjust. Identities = 87/201 (43%), Positives = 127/201 (63%), Gaps = 10/201 (4%) Query: 1 MKQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 MK Y + + +L + + + I A NSA K LQ+ANGA+Y D++K +HD+K+ ALE Sbjct: 247 MKAYKQLEADLVLEFKDKEISAANSAVLANKLLQMANGAIY-DDDKTTVAIHDDKLDALE 305 Query: 61 VIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCG 120 ++E++ PI+V Y + DL RL+K FPQ L ++ +WN GKIP+L HP S G Sbjct: 306 NVVEESQGQPILVFYQYQHDLERLKKRFPQAEEL----TSVDKWNSGKIPILLCHPQSAG 361 Query: 121 HGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELV 180 HGLNLQ GG+I+V+F L W LE +QQ R+ RQ Q V V++++A+NT+DE V Sbjct: 362 HGLNLQKGGHIIVWFGLTWSLEYYQQANARLD--RQGQT---EPVIVHHIVAENTVDEKV 416 Query: 181 LQRLRTKSTIQDLLLNALKKE 201 L+ L+ K Q+ LL A+K + Sbjct: 417 LRILQGKEKNQNALLEAVKAQ 437 >gi|297242712|ref|ZP_06926650.1| superfamily II DNA/RNA helicase, SNF2 family [Gardnerella vaginalis AMD] gi|296888923|gb|EFH27657.1| superfamily II DNA/RNA helicase, SNF2 family [Gardnerella vaginalis AMD] Length = 479 Score = 161 bits (407), Expect = 5e-38, Method: Compositional matrix adjust. Identities = 87/198 (43%), Positives = 128/198 (64%), Gaps = 8/198 (4%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEV 61 K Y + ++++ L+G+ I+A N+A + K LQ+A GAVY +E+K +HD K+ ALE Sbjct: 254 KLYDELKQDMVVSLEGKEIDAINAAYLSNKLLQMAGGAVY-NEKKESVHIHDRKLDALED 312 Query: 62 IIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGH 121 +IE AN P++VAY F DL R++K F R + K I +WN G IP+ HPAS GH Sbjct: 313 LIEAANGKPVLVAYWFKHDLERIKKRF-NVREI-KTSADIADWNAGMIPVALIHPASAGH 370 Query: 122 GLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVL 181 GLNLQ GG+ L++FSL W LE +QQ R+ RQ Q G V ++++I +NTIDE V+ Sbjct: 371 GLNLQAGGSTLIWFSLTWSLELYQQTNARL--NRQGQTG---TVVIHHIITKNTIDEDVM 425 Query: 182 QRLRTKSTIQDLLLNALK 199 + L K+ +QD L++++K Sbjct: 426 RALSMKAKVQDALIDSVK 443 >gi|209559301|ref|YP_002285773.1| Putative helicase-phage associated [Streptococcus phage NZ131.2] gi|209540502|gb|ACI61078.1| Putative helicase-phage associated [Streptococcus phage NZ131.2] Length = 440 Score = 161 bits (407), Expect = 6e-38, Method: Compositional matrix adjust. Identities = 88/201 (43%), Positives = 127/201 (63%), Gaps = 10/201 (4%) Query: 1 MKQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 MK Y + + +L + + + I A NSA K LQ+ANGA+Y D++K +HD+K+ ALE Sbjct: 247 MKAYKQLEADLVLEFKNKEISAANSAVLANKLLQMANGAIY-DDDKATVAIHDDKLDALE 305 Query: 61 VIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCG 120 I+E++ PI+V Y + DL RL+K FPQ L ++ +WN GKIP+L HP S G Sbjct: 306 NIVEESQGQPILVFYQYQHDLERLKKRFPQAEEL----TSVDKWNSGKIPILLCHPQSAG 361 Query: 121 HGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELV 180 HGLNLQ GG+I+V+F L W LE +QQ R+ RQ Q V V++++A+NT+DE V Sbjct: 362 HGLNLQKGGHIIVWFGLTWSLEYYQQANARLD--RQGQT---EPVIVHHIVAENTVDEKV 416 Query: 181 LQRLRTKSTIQDLLLNALKKE 201 L+ L+ K Q+ LL A+K + Sbjct: 417 LRILQGKEKNQNDLLEAVKAQ 437 >gi|71911260|ref|YP_282810.1| phage-related DNA helicase [Streptococcus pyogenes MGAS5005] gi|94989079|ref|YP_597180.1| phage-related DNA helicase [Streptococcus pyogenes MGAS9429] gi|94992970|ref|YP_601069.1| phage-related DNA helicase [Streptococcus pyogenes MGAS2096] gi|71854042|gb|AAZ52065.1| phage-related DNA helicase [Streptococcus pyogenes MGAS5005] gi|94542587|gb|ABF32636.1| phage-related DNA helicase [Streptococcus pyogenes MGAS9429] gi|94546478|gb|ABF36525.1| phage-related DNA helicase [Streptococcus pyogenes MGAS2096] Length = 440 Score = 160 bits (406), Expect = 7e-38, Method: Compositional matrix adjust. Identities = 87/201 (43%), Positives = 126/201 (62%), Gaps = 10/201 (4%) Query: 1 MKQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 MK Y + + +L + + + I A NSA K LQ+ANGA+Y D++K +HD+K+ ALE Sbjct: 247 MKAYKQLEADLVLEFKDKEISAANSAVLANKLLQMANGAIY-DDDKSTVAIHDDKLDALE 305 Query: 61 VIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCG 120 I+E++ PI+V Y + D RL+K FPQ L ++ +WN GKIP+L HP S G Sbjct: 306 DIVEESQGQPILVFYQYQHDFERLKKRFPQAEEL----TSVDKWNSGKIPILLCHPQSAG 361 Query: 121 HGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELV 180 HGLNLQ GG+I+V+F L W LE +QQ R+ RQ Q V V++++A+NT+DE V Sbjct: 362 HGLNLQKGGHIIVWFGLTWSLEYYQQANARLD--RQGQT---EPVIVHHIVAENTVDEKV 416 Query: 181 LQRLRTKSTIQDLLLNALKKE 201 L+ L+ K Q+ LL A+K + Sbjct: 417 LRILQGKEKNQNALLEAVKAQ 437 >gi|226949727|ref|YP_002804818.1| SNF2 domain protein [Clostridium botulinum A2 str. Kyoto] gi|226843727|gb|ACO86393.1| SNF2 domain protein [Clostridium botulinum A2 str. Kyoto] Length = 456 Score = 160 bits (406), Expect = 8e-38, Method: Compositional matrix adjust. Identities = 87/203 (42%), Positives = 133/203 (65%), Gaps = 11/203 (5%) Query: 1 MKQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 + +Y + +++L +L ++I A N+A T K LQ++NGA+Y E+K E+HDEK+KAL Sbjct: 252 INKYKQLEKDLVLELGEDDITAANAAVLTNKLLQMSNGAIY-SEDKQVIEIHDEKLKALL 310 Query: 61 VIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDK----DPCTIQEWNEGKIPLLFAHP 116 IIE AN P+++ Y F D R+ F + + L+ D I++WN G+IP+L HP Sbjct: 311 DIIESANGKPVLIFYSFKHDFDRIVNFF-KSKKLNAIGLGDSKDIKKWNNGEIPILLVHP 369 Query: 117 ASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTI 176 AS GHGLNLQYGGNI+V+F L W LE +QQ R+ RQ G K +V +++L++++T+ Sbjct: 370 ASAGHGLNLQYGGNIIVWFGLTWSLELYQQANARL----HRQ-GQKESVIIHHLVSKDTV 424 Query: 177 DELVLQRLRTKSTIQDLLLNALK 199 DE V++ L +K Q++LL A+K Sbjct: 425 DEDVIKTLGSKEVNQNVLLEAVK 447 >gi|313618477|gb|EFR90480.1| putative protein p41 [Listeria innocua FSL S4-378] Length = 450 Score = 160 bits (405), Expect = 9e-38, Method: Compositional matrix adjust. Identities = 88/198 (44%), Positives = 124/198 (62%), Gaps = 8/198 (4%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEV 61 K Y F+ ++ +L + I+A N+A + K LQ+ANGAVY D E +HD+K+ ALE Sbjct: 254 KVYSDFKEDMVANLGDDEIDAVNAAVLSGKLLQMANGAVY-DSENKAHVIHDKKLDALED 312 Query: 62 IIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGH 121 +IE AN P++VAY F DL R++ FP + + I++WN+GKIP+ HPAS GH Sbjct: 313 LIEGANGKPVLVAYWFKHDLERIKNRFPVRKI--QSSKDIEDWNDGKIPIAVIHPASAGH 370 Query: 122 GLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVL 181 GLNLQ GG+ L++F L W LE +QQ R+ RQ Q + V V+++I +NTIDE VL Sbjct: 371 GLNLQSGGSTLIWFGLTWSLELYQQTNARL--YRQGQ---RDTVIVHHIITKNTIDEDVL 425 Query: 182 QRLRTKSTIQDLLLNALK 199 L K QD L++A+K Sbjct: 426 LALTKKEKTQDALIDAVK 443 >gi|150391738|ref|YP_001321787.1| phage-associated helicase [Alkaliphilus metalliredigens QYMF] gi|149951600|gb|ABR50128.1| phage-associated helicase [Alkaliphilus metalliredigens QYMF] Length = 414 Score = 160 bits (405), Expect = 1e-37, Method: Compositional matrix adjust. Identities = 91/196 (46%), Positives = 123/196 (62%), Gaps = 8/196 (4%) Query: 4 YHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVII 63 Y F+ ++ L E I+A N+A + K LQ+ANGAVY DE+ +HD K+ ALE +I Sbjct: 220 YSGFRDDMVASLGAEEIDAVNAAVLSGKLLQMANGAVY-DEKNKAHFIHDRKLDALEDLI 278 Query: 64 EKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGL 123 E AN P+++AY F DL R+QK FP R L K I+EWNEG+IP+ HPAS GHGL Sbjct: 279 EGANGKPVLIAYWFKHDLDRIQKRFP-ARQL-KSSRDIEEWNEGEIPVAVIHPASAGHGL 336 Query: 124 NLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQR 183 NLQ GG+ LV+F L W LE +QQ R+ RQ G K V ++++I ++TIDE V+ Sbjct: 337 NLQSGGSTLVWFGLTWSLELYQQTNARL----YRQ-GQKDTVVIHHIITKDTIDEDVMTA 391 Query: 184 LRTKSTIQDLLLNALK 199 L K Q L++A+K Sbjct: 392 LTKKEKTQASLIDAVK 407 >gi|153938777|ref|YP_001391667.1| SNF2 domain-containing protein [Clostridium botulinum F str. Langeland] gi|152934673|gb|ABS40171.1| SNF2 domain protein [Clostridium botulinum F str. Langeland] gi|295319699|gb|ADG00077.1| SNF2 domain protein [Clostridium botulinum F str. 230613] Length = 454 Score = 160 bits (404), Expect = 1e-37, Method: Compositional matrix adjust. Identities = 87/203 (42%), Positives = 134/203 (66%), Gaps = 11/203 (5%) Query: 1 MKQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 M +Y + +++L +L ++I A N+A T K LQ++NGA+Y E+K E+H+EK+KAL Sbjct: 252 MDKYKQLEKDLVIELGEDDITATNAAVLTNKLLQMSNGAIY-SEDKSVLEIHEEKLKALL 310 Query: 61 VIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLD----KDPCTIQEWNEGKIPLLFAHP 116 IIE AN P+++ Y F D R+ F + + L+ +D I++WN G+IP+L HP Sbjct: 311 DIIEAANGKPVLIFYSFKHDFDRIVN-FLKTKKLNAIGLEDSKDIKKWNNGEIPILLVHP 369 Query: 117 ASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTI 176 AS GHGLNLQYGGNI+V+F L W LE +QQ R+ RQ G K +V +++L++++T+ Sbjct: 370 ASAGHGLNLQYGGNIIVWFGLTWSLELYQQANARL----HRQ-GQKESVIIHHLVSKDTV 424 Query: 177 DELVLQRLRTKSTIQDLLLNALK 199 DE V++ L +K Q++LL A+K Sbjct: 425 DEDVIKALDSKEVNQNVLLEAVK 447 >gi|298253802|ref|ZP_06977391.1| superfamily II DNA/RNA helicase, SNF2 family [Gardnerella vaginalis 5-1] gi|297532138|gb|EFH71111.1| superfamily II DNA/RNA helicase, SNF2 family [Gardnerella vaginalis 5-1] Length = 479 Score = 160 bits (404), Expect = 1e-37, Method: Compositional matrix adjust. Identities = 87/198 (43%), Positives = 126/198 (63%), Gaps = 8/198 (4%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEV 61 K Y + + ++ L+G+ I+A N+AS + K LQ+A GAVY +E+K +HD K+ ALE Sbjct: 254 KLYDELKADMVVSLEGKEIDAINAASLSNKLLQMAGGAVY-NEKKESVHIHDRKLDALED 312 Query: 62 IIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGH 121 +IE AN P++VAY F DL R++K F R + K I +WN G IP+ HPAS GH Sbjct: 313 LIEAANGKPVLVAYWFKHDLERIKKRF-NVREI-KTSADIADWNAGMIPVALIHPASAGH 370 Query: 122 GLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVL 181 GLNLQ GG+ L++FSL W LE +QQ R+ RQ Q V ++++I +NTIDE V+ Sbjct: 371 GLNLQAGGSTLIWFSLTWSLELYQQTNARL--NRQGQTS---TVVIHHIITKNTIDEDVM 425 Query: 182 QRLRTKSTIQDLLLNALK 199 + L K+ +QD L+ ++K Sbjct: 426 RALSMKAKVQDALIESVK 443 >gi|157311154|ref|YP_001469199.1| helicase [Streptococcus phage P9] gi|119104303|gb|ABL61048.1| helicase [Streptococcus phage P9] Length = 440 Score = 160 bits (404), Expect = 1e-37, Method: Compositional matrix adjust. Identities = 87/201 (43%), Positives = 126/201 (62%), Gaps = 10/201 (4%) Query: 1 MKQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 MK Y + + +L + + + I A NSA K LQ+ANGA+Y D +K +HD+K+ ALE Sbjct: 247 MKAYKQLEADLVLEFKDKEISAANSAVLVNKLLQMANGAIY-DADKTTVAIHDDKLDALE 305 Query: 61 VIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCG 120 I+E++ PI+V Y + DL RL+K FPQ L ++ +WN G+IP+L HP S G Sbjct: 306 DIVEESQGQPILVFYQYQHDLERLKKRFPQAEEL----TSVDKWNSGRIPILLCHPQSAG 361 Query: 121 HGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELV 180 HGLNLQ GG+I+V+F L W LE +QQ R+ RQ Q V V++++A+NT+DE V Sbjct: 362 HGLNLQKGGHIIVWFGLTWSLEYYQQANARLD--RQGQT---EPVIVHHIVAENTVDEKV 416 Query: 181 LQRLRTKSTIQDLLLNALKKE 201 L+ L+ K Q+ LL A+K + Sbjct: 417 LRILQGKEKNQNALLEAVKAQ 437 >gi|220930418|ref|YP_002507327.1| SNF2-related protein [Clostridium cellulolyticum H10] gi|220000746|gb|ACL77347.1| SNF2-related protein [Clostridium cellulolyticum H10] Length = 457 Score = 160 bits (404), Expect = 1e-37, Method: Compositional matrix adjust. Identities = 90/200 (45%), Positives = 128/200 (64%), Gaps = 9/200 (4%) Query: 3 QYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVI 62 +Y K +R+L L +I A +A + K LQ ANGAVY +E + +++H+ K+ ALE I Sbjct: 255 KYRKLERDLLLPLVDGDIVANTAAVLSNKLLQFANGAVY-NENQEIQKIHNAKLDALEDI 313 Query: 63 IEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDP---CTIQEWNEGKIPLLFAHPASC 119 +E AN P+++ Y + DL+R+Q+ F Q RTL K P I +WN GKI LL HP S Sbjct: 314 LEAANGHPVLLFYSYKHDLSRIQERFTQTRTLRKGPEGSKDIADWNSGKIQLLAVHPGSA 373 Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 GHGLNLQ GG+I+V+F L W LE +QQ R+ RQ G K++V +++L+A TIDE Sbjct: 374 GHGLNLQDGGSIIVWFGLTWSLELYQQANARL----HRQ-GQKQSVIIHHLVADGTIDED 428 Query: 180 VLQRLRTKSTIQDLLLNALK 199 V++ L K+T QD L+ A+K Sbjct: 429 VMRALEDKATGQDALMEAVK 448 >gi|300856809|ref|YP_003781793.1| putative phage related DNA helicase [Clostridium ljungdahlii DSM 13528] gi|300436924|gb|ADK16691.1| predicted phage related DNA helicase [Clostridium ljungdahlii DSM 13528] Length = 443 Score = 159 bits (402), Expect = 2e-37, Method: Compositional matrix adjust. Identities = 90/201 (44%), Positives = 127/201 (63%), Gaps = 11/201 (5%) Query: 3 QYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVI 62 +Y + +++L +L E+I A N+A T K LQ++NGA+Y E+K ++HDEK+KAL I Sbjct: 239 KYKELEKDLVLELGKEDITAANAAVLTNKLLQMSNGAIY-SEDKKVVKIHDEKLKALFEI 297 Query: 63 IEKANAAPIIVAYHFNSDLARLQKAFPQGRTLD----KDPCTIQEWNEGKIPLLFAHPAS 118 IE AN P++V Y F D R+ F + L KD I+ WN+G+IP+L HPAS Sbjct: 298 IEAANGKPVLVFYSFKHDFDRIIN-FLSSKKLKAVGLKDSADIKRWNKGEIPILLIHPAS 356 Query: 119 CGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDE 178 GHGLNLQYGGNI+V+F L W LE +QQ R+ RQ G K V + ++IA+ T+DE Sbjct: 357 AGHGLNLQYGGNIIVWFGLTWSLELYQQANARL----HRQ-GQKETVVINHIIAKGTVDE 411 Query: 179 LVLQRLRTKSTIQDLLLNALK 199 V++ L K Q++LL A+K Sbjct: 412 DVMKSLGNKKVNQNILLEAVK 432 >gi|50843064|ref|YP_056291.1| phage-associated protein [Propionibacterium acnes KPA171202] gi|50840666|gb|AAT83333.1| conserved phage-associated protein [Propionibacterium acnes KPA171202] gi|315106939|gb|EFT78915.1| protein, SNF2 family [Propionibacterium acnes HL030PA1] Length = 458 Score = 159 bits (402), Expect = 2e-37, Method: Compositional matrix adjust. Identities = 90/198 (45%), Positives = 121/198 (61%), Gaps = 7/198 (3%) Query: 4 YHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVII 63 Y + + +L DL G+ ++A N+A+ + K LQLA+GA+Y DE EVH K+ ALE II Sbjct: 256 YEQLKADLVVDLDGQVVDAANAAALSGKLLQLASGAIY-DEHGDTVEVHGAKLDALEDII 314 Query: 64 EKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGL 123 E AN ++VAY + D R+Q+ FPQ R L K I+ WN G IPL HPAS GHGL Sbjct: 315 EAANGQTVLVAYWYRHDRERIQRRFPQAREL-KTSADIEAWNRGDIPLGLIHPASAGHGL 373 Query: 124 NLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQR 183 NLQ GG++LV+FSL W LE +QQ R+ RQ QA V + +L A T+D+ VL+ Sbjct: 374 NLQSGGHLLVWFSLTWSLELYQQTNARL--YRQGQA---EPVTITHLTATGTLDQAVLKA 428 Query: 184 LRTKSTIQDLLLNALKKE 201 L K Q L++A+ E Sbjct: 429 LEAKDMTQAALIDAVATE 446 >gi|167039884|ref|YP_001662869.1| SNF2-related protein [Thermoanaerobacter sp. X514] gi|300915304|ref|ZP_07132618.1| SNF2-related protein [Thermoanaerobacter sp. X561] gi|307724792|ref|YP_003904543.1| SNF2-like protein [Thermoanaerobacter sp. X513] gi|166854124|gb|ABY92533.1| SNF2-related protein [Thermoanaerobacter sp. X514] gi|300888580|gb|EFK83728.1| SNF2-related protein [Thermoanaerobacter sp. X561] gi|307581853|gb|ADN55252.1| SNF2-related protein [Thermoanaerobacter sp. X513] Length = 449 Score = 159 bits (402), Expect = 2e-37, Method: Compositional matrix adjust. Identities = 87/199 (43%), Positives = 126/199 (63%), Gaps = 8/199 (4%) Query: 1 MKQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 MK +R+L +++GE + A N+A+ + K LQ+ANGAVY D+ +HD K+ ALE Sbjct: 253 MKTLDTMKRDLITNVKGEEVTAANAAALSGKLLQMANGAVY-DDHGTVLYIHDRKLDALE 311 Query: 61 VIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCG 120 +IE AN P+++AY F DL+R+QK F D +I+ WN+G+IP+ HPAS G Sbjct: 312 DLIEAANGKPVLIAYWFKHDLSRIQKRFEVEVLSTSD--SIKRWNDGEIPIAVIHPASAG 369 Query: 121 HGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELV 180 HGLNLQ GG+ LV+F L W LE +QQ R+ RQ G K V +++LI++ TIDE V Sbjct: 370 HGLNLQAGGSTLVWFGLTWSLELYQQTNARL----WRQ-GQKETVVIHHLISKGTIDERV 424 Query: 181 LQRLRTKSTIQDLLLNALK 199 ++ L K+ Q L++A+K Sbjct: 425 MKALNDKNNTQSALIDAVK 443 >gi|313813466|gb|EFS51180.1| protein, SNF2 family [Propionibacterium acnes HL025PA1] Length = 458 Score = 159 bits (402), Expect = 2e-37, Method: Compositional matrix adjust. Identities = 90/198 (45%), Positives = 121/198 (61%), Gaps = 7/198 (3%) Query: 4 YHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVII 63 Y + + +L DL G+ ++A N+A+ + K LQLA+GA+Y DE EVH K+ ALE II Sbjct: 256 YEQLKADLVVDLDGQVVDAANAAALSGKLLQLASGAIY-DEHGDTVEVHGAKLDALEDII 314 Query: 64 EKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGL 123 E AN ++VAY + D R+Q+ FPQ R L K I+ WN G IPL HPAS GHGL Sbjct: 315 EAANGQTVLVAYWYRHDRERIQRRFPQAREL-KTSADIEAWNRGDIPLGLIHPASAGHGL 373 Query: 124 NLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQR 183 NLQ GG++LV+FSL W LE +QQ R+ RQ QA V + +L A T+D+ VL+ Sbjct: 374 NLQSGGHLLVWFSLTWSLELYQQTNARL--YRQGQA---EPVTITHLTATGTLDQAVLKA 428 Query: 184 LRTKSTIQDLLLNALKKE 201 L K Q L++A+ E Sbjct: 429 LEAKDMTQAALIDAVATE 446 >gi|167630964|ref|YP_001681463.1| phage-associated helicase, snf2 family [Heliobacterium modesticaldum Ice1] gi|167593704|gb|ABZ85452.1| phage-associated helicase, snf2 family [Heliobacterium modesticaldum Ice1] Length = 452 Score = 159 bits (401), Expect = 2e-37, Method: Compositional matrix adjust. Identities = 88/198 (44%), Positives = 124/198 (62%), Gaps = 8/198 (4%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEV 61 K Y +REL L+G+ I+A ++AS + K LQ+ANGAVY D+ +H K+ ALE Sbjct: 254 KVYETMKRELVLSLEGQEIDAGSAASLSNKLLQMANGAVYADDGSV-VNIHGRKLDALED 312 Query: 62 IIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGH 121 I+E AN P+++AY + DL R+ K FP R D +I+ WN+G+IP+ HPAS GH Sbjct: 313 ILEAANGKPVLIAYWYKHDLNRILKRFPAERLDSVD--SIRRWNDGEIPVAVIHPASAGH 370 Query: 122 GLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVL 181 GLNLQ GG+ LV+F L W LE +QQ R+ RQ G K V ++++I + TIDE V+ Sbjct: 371 GLNLQAGGSTLVWFGLTWSLELYQQTNARL----WRQ-GQKETVVIHHIITKGTIDEQVM 425 Query: 182 QRLRTKSTIQDLLLNALK 199 + LR K Q L++A+K Sbjct: 426 KALRLKDKTQTALIDAVK 443 >gi|327461127|gb|EGF07460.1| SNF2 domain protein [Streptococcus sanguinis SK1057] Length = 450 Score = 157 bits (398), Expect = 6e-37, Method: Compositional matrix adjust. Identities = 84/198 (42%), Positives = 130/198 (65%), Gaps = 7/198 (3%) Query: 4 YHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVII 63 Y +F+ E+ L+G+ ++A NSAS + K LQ+ANG VY D+ + +HD+K+ ALE ++ Sbjct: 252 YKEFKAEMVVSLKGQVLDAVNSASLSNKLLQMANGMVY-DDNRKTVLLHDQKLVALEEMV 310 Query: 64 EKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGL 123 E N P+++AY F DL R+++ +P+ R + + I++WN+GKI L HPAS GHGL Sbjct: 311 ESMNGRPLLIAYCFQHDLRRIKERYPEARVIQSNQ-DIEDWNKGKIVLGLIHPASSGHGL 369 Query: 124 NLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQR 183 NLQ GG+ + +F L W LE +QQ+ R+ RQ G K V V+++I +N+IDE V++R Sbjct: 370 NLQAGGHTICWFGLTWSLELYQQLNARL----WRQ-GQKETVVVHHIITKNSIDEQVMKR 424 Query: 184 LRTKSTIQDLLLNALKKE 201 L+ K Q L++A+K E Sbjct: 425 LKEKDISQQSLIDAVKYE 442 >gi|304389862|ref|ZP_07371821.1| SNF2 domain protein [Mobiluncus curtisii subsp. curtisii ATCC 35241] gi|304327038|gb|EFL94277.1| SNF2 domain protein [Mobiluncus curtisii subsp. curtisii ATCC 35241] Length = 458 Score = 157 bits (396), Expect = 9e-37, Method: Compositional matrix adjust. Identities = 89/204 (43%), Positives = 123/204 (60%), Gaps = 8/204 (3%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEV 61 K Y + + +L L E I+A N+A+ + K LQLA+GA+Y + W VHD K+ ALE Sbjct: 254 KVYEQLKADLVLQLGDETIDAANAAALSGKLLQLASGAIYTGD-GDWASVHDRKLDALED 312 Query: 62 IIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGH 121 ++E N P++VAY F D R+ FPQ R L K I+ WN+G+I HPAS GH Sbjct: 313 LVEATNGNPLLVAYWFTHDRERITARFPQAREL-KTSADIEAWNKGEITFGLIHPASAGH 371 Query: 122 GLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVL 181 GLNLQ GG++LV+FSL W LE +QQ R+ RQ Q+ V + +L+A+ T+DE VL Sbjct: 372 GLNLQAGGHLLVWFSLTWSLELYQQTNARL--YRQGQS---EPVTITHLVAEGTLDEAVL 426 Query: 182 QRLRTKSTIQDLLLNALKKETIHV 205 + L K Q L+NA+ +E IH Sbjct: 427 RALDVKDATQAALINAVAQE-IHT 449 >gi|300933478|ref|ZP_07148734.1| phage-associated protein [Corynebacterium resistens DSM 45100] Length = 453 Score = 157 bits (396), Expect = 1e-36, Method: Compositional matrix adjust. Identities = 88/197 (44%), Positives = 120/197 (60%), Gaps = 7/197 (3%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEV 61 K Y + + E+ DL G+ I+A N+A+ + K LQLA+GA+Y DE+ + VHD K+ ALE Sbjct: 254 KAYERLRDEMVLDLDGQVIDAANAAALSGKLLQLASGAIY-DEDGNTVVVHDRKLDALED 312 Query: 62 IIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGH 121 ++E AN P++VAY F D R+ FP R L I +WN ++PL HPAS GH Sbjct: 313 LVEAANGQPLLVAYWFKHDRERITTRFPGARELTTS-ADITQWNAREVPLALIHPASAGH 371 Query: 122 GLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVL 181 GLNLQ GGN+LV+FSL W LE +QQ R+ RQ G + V + +L A +T+DE VL Sbjct: 372 GLNLQQGGNLLVWFSLTWSLELYQQTNARL----YRQ-GQDQPVTITHLAADHTLDEAVL 426 Query: 182 QRLRTKSTIQDLLLNAL 198 L K Q L+NA+ Sbjct: 427 AALDNKDMTQAALINAV 443 >gi|331085752|ref|ZP_08334835.1| hypothetical protein HMPREF0987_01138 [Lachnospiraceae bacterium 9_1_43BFAA] gi|330406675|gb|EGG86180.1| hypothetical protein HMPREF0987_01138 [Lachnospiraceae bacterium 9_1_43BFAA] Length = 448 Score = 155 bits (393), Expect = 2e-36, Method: Compositional matrix adjust. Identities = 86/198 (43%), Positives = 123/198 (62%), Gaps = 7/198 (3%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEV 61 K Y F+R++ + E ++A N+A+ + K LQ+ANGAVY E+K +HD K+ ALE Sbjct: 252 KLYQSFERDMVLSIGEEELDAANAAALSNKLLQMANGAVY-GEDKKVISIHDRKLDALED 310 Query: 62 IIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGH 121 ++E AN PI+VAY + DL R+QK P+ R +D I +WN G+I + HPAS GH Sbjct: 311 LVEAANGKPILVAYWYKHDLMRIQKRLPEARVIDTSK-DITDWNHGEIAIGLIHPASAGH 369 Query: 122 GLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVL 181 GLNLQ GG +V+F L W LE +QQM R+ RQ G K V +++LI + T DE V+ Sbjct: 370 GLNLQEGGCTIVWFGLTWSLELYQQMNARL----WRQ-GQKHTVVIHHLITKGTHDEDVM 424 Query: 182 QRLRTKSTIQDLLLNALK 199 + L K T Q L++A++ Sbjct: 425 KALEKKETGQSALIHAVR 442 >gi|284048430|ref|YP_003398769.1| SNF2-related protein [Acidaminococcus fermentans DSM 20731] gi|283952651|gb|ADB47454.1| SNF2-related protein [Acidaminococcus fermentans DSM 20731] Length = 449 Score = 155 bits (392), Expect = 3e-36, Method: Compositional matrix adjust. Identities = 84/200 (42%), Positives = 122/200 (61%), Gaps = 7/200 (3%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEV 61 K+Y F++ L +L G + A N+AS T+K Q+ANGA+Y D+ K +HD K+ ALE Sbjct: 252 KRYQDFKKSLVMELPGGEVTAANAASLTLKLTQMANGAIYTDDGKTI-HLHDRKLDALED 310 Query: 62 IIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGH 121 ++E AN P++VAY F D R+ + + R L K +WN GKIP+ HPAS GH Sbjct: 311 LVESANGRPVLVAYWFRHDKERICQRM-EAREL-KSSQDFADWNAGKIPVALIHPASAGH 368 Query: 122 GLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVL 181 GLNLQ GG+IL++F L W LE +QQ + R+ RQ R V V +++ ++TIDE +L Sbjct: 369 GLNLQQGGSILIWFGLTWSLELYQQTVARL----WRQGQESRTVIVQHIVTKSTIDERIL 424 Query: 182 QRLRTKSTIQDLLLNALKKE 201 + L K + Q L+ A+K + Sbjct: 425 KALEKKDSSQAALIEAVKAD 444 >gi|325690428|gb|EGD32431.1| SNF2 domain protein [Streptococcus sanguinis SK115] Length = 450 Score = 154 bits (389), Expect = 6e-36, Method: Compositional matrix adjust. Identities = 83/198 (41%), Positives = 129/198 (65%), Gaps = 7/198 (3%) Query: 4 YHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVII 63 Y +F+ E+ ++G+ ++A NSAS + K LQ++NG VY DE + +HD+K+ ALE ++ Sbjct: 252 YKEFKTEMMVSIKGQVLDAVNSASLSNKLLQMSNGMVY-DENRKAVLLHDQKLVALEEMV 310 Query: 64 EKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGL 123 E N P++VAY F DL R+++ F + R + + I++WN+GKI L HPAS GHGL Sbjct: 311 ESMNNRPLLVAYWFQHDLKRIKERFSEARVIQSNQ-DIEDWNKGKIVLGLVHPASSGHGL 369 Query: 124 NLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQR 183 NLQ GG+ + +F L W LE +QQ+ R+ RQ G K V V+++I ++T+DE V++R Sbjct: 370 NLQAGGHTICWFGLTWSLELYQQLNARL----WRQ-GQKETVVVHHIITKSTMDEQVMKR 424 Query: 184 LRTKSTIQDLLLNALKKE 201 L+ K Q L++A+K E Sbjct: 425 LKEKDISQQSLIDAVKYE 442 >gi|325478705|gb|EGC81816.1| type III restriction enzyme, res subunit [Anaerococcus prevotii ACS-065-V-Col13] Length = 448 Score = 154 bits (389), Expect = 6e-36, Method: Compositional matrix adjust. Identities = 83/196 (42%), Positives = 129/196 (65%), Gaps = 8/196 (4%) Query: 4 YHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVII 63 Y +++L ++ ++I+A N+A+ + K LQ+A+G+VY DE+K+ +HD K+ ALE +I Sbjct: 256 YETLKKDLVVSIKDKDIDAVNAAALSNKLLQMASGSVY-DEDKNMIHIHDRKLDALEDLI 314 Query: 64 EKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGL 123 E AN P+++AY + SDL R++ F R L K +EWN+GKIP+ HPAS GHGL Sbjct: 315 EGANGKPVLIAYWYKSDLKRIKDRFDL-REL-KTSEDFKEWNQGKIPVAIIHPASAGHGL 372 Query: 124 NLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQR 183 NLQ GG+ L++FSL W LE ++Q R+ RQ G K V +++++A+ TIDE V++ Sbjct: 373 NLQAGGSTLIWFSLTWSLELYEQTNARL----YRQ-GQKETVVIHHILAKGTIDEDVMKA 427 Query: 184 LRTKSTIQDLLLNALK 199 L K+ Q L++A+K Sbjct: 428 LENKNKTQAALIDAVK 443 >gi|197303505|ref|ZP_03168544.1| hypothetical protein RUMLAC_02227 [Ruminococcus lactaris ATCC 29176] gi|197297503|gb|EDY32064.1| hypothetical protein RUMLAC_02227 [Ruminococcus lactaris ATCC 29176] Length = 333 Score = 154 bits (388), Expect = 8e-36, Method: Compositional matrix adjust. Identities = 83/205 (40%), Positives = 123/205 (60%), Gaps = 10/205 (4%) Query: 4 YHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVII 63 Y + E++ L+ I A N+A+ + K LQ+ANGAVY D+ ++HD+K+ ALE +I Sbjct: 133 YDDMEAEMFLPLRTGEITAANAAALSGKLLQMANGAVYSDDGDEI-QIHDQKLDALEDLI 191 Query: 64 EKANAAPIIVAYHFNSDLARLQKAFPQGRT----LDKDPCTIQEWNEGKIPLLFAHPASC 119 E AN P++VAY F DL R+++ + + LD + +I++WN G++P+ HPAS Sbjct: 192 EAANGKPVMVAYWFKHDLTRIRRRLSERKISFEKLDSEE-SIRKWNRGELPVALIHPASA 250 Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 GHGLNLQ GGNIL++F L W LE +QQ + R+ RQ V V ++I TIDE Sbjct: 251 GHGLNLQSGGNILIWFGLTWSLELYQQTVARL----WRQGQSAETVVVQHIITAGTIDED 306 Query: 180 VLQRLRTKSTIQDLLLNALKKETIH 204 V++ L K Q+ L+ A+K H Sbjct: 307 VMKALANKDMTQNRLIAAVKARVTH 331 >gi|328913305|gb|AEB64901.1| SWI/SNF chromatin-remodeling complex subunit snf22 SWI/SNF complex subunit snf22; ATP-dependent helicase snf22 [Bacillus amyloliquefaciens LL3] Length = 424 Score = 153 bits (387), Expect = 1e-35, Method: Compositional matrix adjust. Identities = 84/197 (42%), Positives = 125/197 (63%), Gaps = 7/197 (3%) Query: 3 QYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVI 62 +Y + +++L ++ A +A + K LQLANGAVY DE +++HDEK+ ALE I Sbjct: 228 KYKQLEKDLLLPFLDGDVVADTAAVLSNKLLQLANGAVY-DENGEIQKLHDEKLNALEDI 286 Query: 63 IEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHG 122 ++ AN PI+V Y + DL R+Q+ F + +TLD I +WN GKI +L AHPAS GHG Sbjct: 287 VDAANGKPILVFYSYKHDLERIQQKFKKAKTLDS-SREIADWNNGKIEMLLAHPASTGHG 345 Query: 123 LNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQ 182 LNLQ GG+++V+F + W LE +QQ R+ RQ G K +V V +L+ + T+DE V++ Sbjct: 346 LNLQDGGHVIVWFGMTWSLELYQQANARL----DRQ-GQKHSVIVNHLVTEGTVDEDVMR 400 Query: 183 RLRTKSTIQDLLLNALK 199 L K+ Q+ L+ A+K Sbjct: 401 ALEGKAVGQNALMEAVK 417 >gi|218133421|ref|ZP_03462225.1| hypothetical protein BACPEC_01286 [Bacteroides pectinophilus ATCC 43243] gi|217990796|gb|EEC56802.1| hypothetical protein BACPEC_01286 [Bacteroides pectinophilus ATCC 43243] Length = 457 Score = 153 bits (386), Expect = 1e-35, Method: Compositional matrix adjust. Identities = 84/197 (42%), Positives = 126/197 (63%), Gaps = 9/197 (4%) Query: 4 YHKFQRELYCDL-QGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVI 62 Y + E+ + +G++I+A N+A+ + K Q+ANGAVY DE + + +HD K+ ALE + Sbjct: 252 YDRMADEMILEYGEGQDIDAVNAAALSNKLQQMANGAVY-DESGNVRNIHDRKLDALEDL 310 Query: 63 IEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHG 122 IE AN P++VAY F D R+ K FP R ++ I++WNEGKIP+ HPAS GHG Sbjct: 311 IESANGKPLLVAYWFKHDRERILKRFP-ARDINTKK-DIEDWNEGKIPVALIHPASAGHG 368 Query: 123 LNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQ 182 LNLQ GG+ +V+FSL W LE +QQ+ R+ RQ Q K V + +L+ + T+DE +L+ Sbjct: 369 LNLQEGGSTIVWFSLTWSLELYQQLNARL--YRQGQ---KHTVIIEHLVTEGTVDEDILR 423 Query: 183 RLRTKSTIQDLLLNALK 199 + K T Q+ ++ A+K Sbjct: 424 AIEKKDTTQNAMIEAVK 440 >gi|227498325|ref|ZP_03928475.1| conserved hypothetical protein [Acidaminococcus sp. D21] gi|226903787|gb|EEH89705.1| conserved hypothetical protein [Acidaminococcus sp. D21] Length = 457 Score = 153 bits (386), Expect = 1e-35, Method: Compositional matrix adjust. Identities = 83/200 (41%), Positives = 124/200 (62%), Gaps = 7/200 (3%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEV 61 ++Y + ++ L +L G + A N+AS T+K Q+ANGA+Y D+ K +HD K+ ALE Sbjct: 252 ERYDELKKYLVLELPGGEVTAANAASLTLKLSQMANGAIYTDD-KDVVTIHDRKLDALED 310 Query: 62 IIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGH 121 ++E AN P++VAY F D R++K + R L K+ +WNEGKIP+ HPAS GH Sbjct: 311 LVESANGKPVLVAYWFKHDKDRIRKRM-EAREL-KESQDFADWNEGKIPVALIHPASAGH 368 Query: 122 GLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVL 181 GLNLQ GG+ILV+F L W +E +QQ R+ RQ + V + +++A++TIDE +L Sbjct: 369 GLNLQQGGSILVWFGLTWSMELYQQTNARL----WRQGQTDKTVIIQHIVAKSTIDERIL 424 Query: 182 QRLRTKSTIQDLLLNALKKE 201 + L K Q L+ A+K + Sbjct: 425 KVLEHKDGTQSALIEAVKAD 444 >gi|297587094|ref|ZP_06945739.1| SNF2 domain protein [Finegoldia magna ATCC 53516] gi|297575075|gb|EFH93794.1| SNF2 domain protein [Finegoldia magna ATCC 53516] Length = 447 Score = 153 bits (386), Expect = 2e-35, Method: Compositional matrix adjust. Identities = 82/196 (41%), Positives = 129/196 (65%), Gaps = 8/196 (4%) Query: 4 YHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVII 63 Y +++L ++ ++I+A N+A+ + K LQ+A+G+VY DE+K+ +HD K+ ALE +I Sbjct: 256 YETLKKDLVVSIKDKDIDAVNAAALSNKLLQMASGSVY-DEDKNMIHIHDRKLDALEDLI 314 Query: 64 EKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGL 123 E AN P+++AY + SDL R++ F R L K ++EWN+G IP+ HPAS GHGL Sbjct: 315 EGANGKPVLIAYWYKSDLKRIKDRF-DVREL-KASEDLKEWNQGNIPVAIIHPASAGHGL 372 Query: 124 NLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQR 183 NLQ GG+ L++FSL W LE ++Q R+ RQ G K V +++++A+ TIDE V++ Sbjct: 373 NLQAGGSTLIWFSLTWSLELYEQTNARL----YRQ-GQKETVVIHHILAKGTIDEDVMKA 427 Query: 184 LRTKSTIQDLLLNALK 199 L K+ Q L++A+K Sbjct: 428 LENKNKTQAALIDAVK 443 >gi|302873665|ref|YP_003842298.1| SNF2-related protein [Clostridium cellulovorans 743B] gi|307686611|ref|ZP_07629057.1| SNF2-related protein [Clostridium cellulovorans 743B] gi|302576522|gb|ADL50534.1| SNF2-related protein [Clostridium cellulovorans 743B] Length = 457 Score = 152 bits (384), Expect = 2e-35, Method: Compositional matrix adjust. Identities = 91/202 (45%), Positives = 125/202 (61%), Gaps = 15/202 (7%) Query: 3 QYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVI 62 +Y K ++EL + ++ A +A + K LQ+ANGAVY DE KE+H+EK+KAL+ + Sbjct: 255 KYKKLEKELLLPFEEADVVANTAAVLSNKLLQMANGAVY-DENGEVKEIHNEKLKALDDV 313 Query: 63 IEKANAAPIIVAYHFNSDLARLQK-----AFPQGRTLDKDPCTIQEWNEGKIPLLFAHPA 117 IE AN I+V Y + DL RL K AF T KD I++WN+GKIP++ HPA Sbjct: 314 IEAANGKSILVFYSYKHDLERLSKHLKNKAFKVLNT-SKD---IEKWNKGKIPIMLVHPA 369 Query: 118 SCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 S GHGLNLQ+GGNI+V+F L W LE +QQ R+ RQ Q + V V ++IA+ TID Sbjct: 370 SAGHGLNLQFGGNIIVWFGLTWSLELYQQANARL--YRQGQT---QGVIVNHIIAKGTID 424 Query: 178 ELVLQRLRTKSTIQDLLLNALK 199 E V++ L K Q L+ A+K Sbjct: 425 EEVMKALENKEKGQSTLIEAVK 446 >gi|227875061|ref|ZP_03993206.1| helicase [Mobiluncus mulieris ATCC 35243] gi|304390304|ref|ZP_07372257.1| SNF2 domain protein [Mobiluncus curtisii subsp. curtisii ATCC 35241] gi|306817348|ref|ZP_07451093.1| SNF2 domain protein [Mobiluncus mulieris ATCC 35239] gi|227844339|gb|EEJ54503.1| helicase [Mobiluncus mulieris ATCC 35243] gi|304326060|gb|EFL93305.1| SNF2 domain protein [Mobiluncus curtisii subsp. curtisii ATCC 35241] gi|304649789|gb|EFM47069.1| SNF2 domain protein [Mobiluncus mulieris ATCC 35239] Length = 457 Score = 152 bits (384), Expect = 3e-35, Method: Compositional matrix adjust. Identities = 89/200 (44%), Positives = 122/200 (61%), Gaps = 7/200 (3%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEV 61 K Y + + +L DL G I+A N+A+ + K LQLA+GA+Y + + W VHD K+ ALE Sbjct: 254 KIYEQLKADLVLDLDGATIDAANAAALSGKLLQLASGAIYTGDGQ-WAPVHDRKLDALED 312 Query: 62 IIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGH 121 + E AN +P++VAY F D R+ FPQ R L K I+ WN G+I L HPAS GH Sbjct: 313 LYEAANGSPLLVAYWFTHDRKRITARFPQAREL-KTSADIEAWNRGEIALGLIHPASAGH 371 Query: 122 GLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVL 181 GLNLQ GG++LV+FSL W LE +QQ R+ RQ Q+ V + L+A+ T+DE VL Sbjct: 372 GLNLQAGGHLLVWFSLTWSLELYQQTNARL--YRQGQS---EPVTITNLVAEGTLDETVL 426 Query: 182 QRLRTKSTIQDLLLNALKKE 201 + L K Q L++A+ E Sbjct: 427 KALDAKDATQAALIDAVAAE 446 >gi|167746056|ref|ZP_02418183.1| hypothetical protein ANACAC_00751 [Anaerostipes caccae DSM 14662] gi|167654571|gb|EDR98700.1| hypothetical protein ANACAC_00751 [Anaerostipes caccae DSM 14662] Length = 452 Score = 152 bits (384), Expect = 3e-35, Method: Compositional matrix adjust. Identities = 83/204 (40%), Positives = 123/204 (60%), Gaps = 10/204 (4%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEV 61 K+Y + EL L I A N+AS + K Q+ANGAVY D+E VH+ K+ ALE Sbjct: 254 KKYEDMKAELVLALPEGEITAANAASLSNKLSQMANGAVYADDESIL-SVHERKLDALED 312 Query: 62 IIEKANAAPIIVAYHFNSDLARLQKAFPQGRT----LDKDPCTIQEWNEGKIPLLFAHPA 117 IIE AN P++VAY F DL R+++ + + LD D +++ WN+G++P+ HPA Sbjct: 313 IIESANGKPLLVAYWFKHDLMRIEQRLNEKKIPFQKLDTD-ASMKRWNKGELPVALIHPA 371 Query: 118 SCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 S GHGLNLQ GG+ LV+F + W LE +QQ + R+ RQ R V + +++ Q T+D Sbjct: 372 SAGHGLNLQSGGSTLVWFGITWSLELYQQTVARL----YRQGQESRTVTIIHILTQGTVD 427 Query: 178 ELVLQRLRTKSTIQDLLLNALKKE 201 E +++ L K + Q L++A+K E Sbjct: 428 EKIMKALADKDSTQSALIDAVKAE 451 >gi|302876787|ref|YP_003845420.1| SNF2-related protein [Clostridium cellulovorans 743B] gi|307687468|ref|ZP_07629914.1| SNF2-related protein [Clostridium cellulovorans 743B] gi|302579644|gb|ADL53656.1| SNF2-related protein [Clostridium cellulovorans 743B] Length = 456 Score = 152 bits (383), Expect = 4e-35, Method: Compositional matrix adjust. Identities = 84/205 (40%), Positives = 125/205 (60%), Gaps = 10/205 (4%) Query: 1 MKQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 + Y + +++L L G I A N+AS + K Q+ANGAVY D+ K + E HD+K+ ALE Sbjct: 255 LDTYEEMKKDLVLSLPGGEITASNAASLSGKLSQMANGAVYTDD-KSYIEFHDKKLDALE 313 Query: 61 VIIEKANAAPIIVAYHFNSDLARLQKAFP----QGRTLDKDPCTIQEWNEGKIPLLFAHP 116 IIE AN P++VAY + DL R+++ Q + LD D +I++WN G++P+ HP Sbjct: 314 DIIEAANGQPLMVAYWYKHDLIRIEERLKSLGVQYQRLDSD-ASIEKWNRGELPVALVHP 372 Query: 117 ASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTI 176 AS GHGLNLQ GG+ LV+F + W LE +QQ R+ RQ V + +LI++ TI Sbjct: 373 ASAGHGLNLQSGGSTLVWFGITWSLELYQQTNARL----YRQGQTASCVKIIHLISKGTI 428 Query: 177 DELVLQRLRTKSTIQDLLLNALKKE 201 DE +++ L K Q L++A+K + Sbjct: 429 DERIVKALSDKDNTQAALIDAVKAD 453 >gi|297583090|ref|YP_003698870.1| SNF2-like protein [Bacillus selenitireducens MLS10] gi|297141547|gb|ADH98304.1| SNF2-related protein [Bacillus selenitireducens MLS10] Length = 458 Score = 151 bits (382), Expect = 5e-35, Method: Compositional matrix adjust. Identities = 82/201 (40%), Positives = 128/201 (63%), Gaps = 8/201 (3%) Query: 1 MKQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 M + +R+L ++GE+I A N+A+ + K LQ+ANGAVY D++ +H+ K+ ALE Sbjct: 253 MARIEAIKRDLIITVEGEDITASNAAALSGKLLQMANGAVY-DDQGQPIAIHERKLDALE 311 Query: 61 VIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCG 120 ++E AN P+++AY F DL R+Q A+ + L + +IQ+WNEG+I + HPAS G Sbjct: 312 DMVEAANGKPVLIAYWFKHDLDRIQ-AWIEATVL-SNAASIQQWNEGRIQVGLIHPASAG 369 Query: 121 HGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELV 180 HGLNLQ+GG+ L++F L W LE +QQ R+ RQ Q +V +++LI + T+DE V Sbjct: 370 HGLNLQFGGSTLIWFGLTWSLELYQQTNARL--YRQGQT---ESVAIHHLIGKGTLDERV 424 Query: 181 LQRLRTKSTIQDLLLNALKKE 201 ++ L+ K Q ++A+K E Sbjct: 425 MKALKKKDVSQTAFIDAVKAE 445 >gi|300853544|ref|YP_003778528.1| putative phage related DNA helicase [Clostridium ljungdahlii DSM 13528] gi|300433659|gb|ADK13426.1| predicted phage related DNA helicase [Clostridium ljungdahlii DSM 13528] Length = 453 Score = 151 bits (381), Expect = 5e-35, Method: Compositional matrix adjust. Identities = 86/198 (43%), Positives = 125/198 (63%), Gaps = 8/198 (4%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEV 61 K Y +++L L+GE I+A N+A+ + K Q+ANGAVY E+K +HD+K+ ALE Sbjct: 254 KAYDGMKQDLVLSLKGEEIDAVNAAALSNKLCQMANGAVY-GEDKRVFTIHDKKLDALED 312 Query: 62 IIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGH 121 +IE AN P++VAY FN DL R++K F + R + K I+ WN G+I + HPAS GH Sbjct: 313 LIESANGKPVLVAYWFNHDLERIKKRF-KVREI-KTSKDIKNWNNGEIEVAVIHPASAGH 370 Query: 122 GLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVL 181 GLNLQ GG+ L++F L W LE +QQ R+ RQ G V ++++I + TIDE ++ Sbjct: 371 GLNLQAGGSTLIWFGLTWSLELYQQTNARL----WRQ-GQNETVVIHHIITKGTIDEDIM 425 Query: 182 QRLRTKSTIQDLLLNALK 199 + LR K +Q L+ A+K Sbjct: 426 RALRRKEKVQSDLIAAVK 443 >gi|300909415|ref|ZP_07126876.1| SNF2 domain protein [Lactobacillus reuteri SD2112] gi|300893280|gb|EFK86639.1| SNF2 domain protein [Lactobacillus reuteri SD2112] Length = 451 Score = 151 bits (381), Expect = 5e-35, Method: Compositional matrix adjust. Identities = 83/196 (42%), Positives = 120/196 (61%), Gaps = 8/196 (4%) Query: 4 YHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVII 63 Y + +L QG+ I+A N+AS + K Q+ANG VY D+++ ++H K+ ALE ++ Sbjct: 255 YDELNAQLVVSTQGKQIDALNAASLSNKLCQMANGCVY-DDQQQIVQIHQRKLDALEDLV 313 Query: 64 EKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGL 123 E AN P++VAY F DL +++ F + R + K P IQ+WN GKIPL HPAS GHGL Sbjct: 314 EAANGKPVLVAYWFKHDLIQIKSRF-KVREI-KTPRDIQDWNAGKIPLALIHPASAGHGL 371 Query: 124 NLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQR 183 NLQ GG L+++ L W LE +QQ R+ QRQ V ++++I + TIDE +L Sbjct: 372 NLQAGGATLIWYGLTWSLELYQQTNARLWRQGQRQ-----PVVIHHIITEGTIDENILAA 426 Query: 184 LRTKSTIQDLLLNALK 199 L+ K Q L+NA+K Sbjct: 427 LKRKDKTQLALINAVK 442 >gi|323693306|ref|ZP_08107524.1| SNF2 domain-containing protein [Clostridium symbiosum WAL-14673] gi|323502789|gb|EGB18633.1| SNF2 domain-containing protein [Clostridium symbiosum WAL-14673] Length = 447 Score = 151 bits (381), Expect = 6e-35, Method: Compositional matrix adjust. Identities = 86/199 (43%), Positives = 117/199 (58%), Gaps = 7/199 (3%) Query: 1 MKQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 + +Y + ++EL +L I A N+AS T K QLANGA+Y D E HD K+ ALE Sbjct: 253 VTRYEELKQELVLELPDGEITAANAASLTGKLSQLANGAIYSDTGDT-IEFHDRKLDALE 311 Query: 61 VIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCG 120 IIE AN P++VAY F DL+R++K F K I +WN GKIP+ HPAS G Sbjct: 312 DIIESANGKPVLVAYWFKHDLSRIKKRFDVREI--KSSKDITDWNAGKIPVAVIHPASAG 369 Query: 121 HGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELV 180 HGLNLQ GG+ L++F L W LE +QQ R+ RQ V + ++I + TIDE + Sbjct: 370 HGLNLQAGGSTLIWFGLTWSLELYQQTNARL----WRQGQTSGTVVIEHIITKGTIDERI 425 Query: 181 LQRLRTKSTIQDLLLNALK 199 L+ L K Q+ L++A+K Sbjct: 426 LKALSKKELTQNALIDAVK 444 >gi|227530256|ref|ZP_03960305.1| helicase [Lactobacillus vaginalis ATCC 49540] gi|227349829|gb|EEJ40120.1| helicase [Lactobacillus vaginalis ATCC 49540] Length = 451 Score = 151 bits (381), Expect = 6e-35, Method: Compositional matrix adjust. Identities = 83/196 (42%), Positives = 120/196 (61%), Gaps = 8/196 (4%) Query: 4 YHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVII 63 Y + +L QG+ I+A N+AS + K Q+ANG VY D+++ ++H K+ ALE ++ Sbjct: 255 YDELNAQLVVSTQGKQIDALNAASLSNKLCQMANGCVY-DDQQQIVQIHQRKLDALEDLV 313 Query: 64 EKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGL 123 E AN P++VAY F DL +++ F + R + K P IQ+WN GKIPL HPAS GHGL Sbjct: 314 EAANGKPVLVAYWFKHDLIQIKSRF-KVREI-KTPRDIQDWNAGKIPLALIHPASAGHGL 371 Query: 124 NLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQR 183 NLQ GG L+++ L W LE +QQ R+ QRQ V ++++I + TIDE +L Sbjct: 372 NLQAGGATLIWYGLTWSLELYQQTNARLWRQGQRQ-----PVVIHHIITEGTIDENILAA 426 Query: 184 LRTKSTIQDLLLNALK 199 L+ K Q L+NA+K Sbjct: 427 LKRKDKTQLALINAVK 442 >gi|154504835|ref|ZP_02041573.1| hypothetical protein RUMGNA_02345 [Ruminococcus gnavus ATCC 29149] gi|153794718|gb|EDN77138.1| hypothetical protein RUMGNA_02345 [Ruminococcus gnavus ATCC 29149] Length = 457 Score = 151 bits (381), Expect = 6e-35, Method: Compositional matrix adjust. Identities = 83/197 (42%), Positives = 125/197 (63%), Gaps = 9/197 (4%) Query: 4 YHKFQRELYCDL-QGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVI 62 Y + E+ + +G++I+A N+A+ + K Q+ANGAVY DE + + +HD K+ ALE + Sbjct: 252 YDRMADEMILEYGEGQDIDAVNAAALSNKLQQMANGAVY-DESGNVRNIHDRKLDALEDL 310 Query: 63 IEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHG 122 IE AN P++VAY F D R+ K FP R ++ I++WNEGKIP+ HPAS GHG Sbjct: 311 IESANGKPLLVAYWFKHDRERILKRFP-ARDINTKK-DIEDWNEGKIPVALIHPASAGHG 368 Query: 123 LNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQ 182 LNLQ GG+ +V+FSL W LE +QQ+ R+ RQ Q K V + +L+ + T+DE +L+ Sbjct: 369 LNLQEGGSTIVWFSLTWSLELYQQLNARL--YRQGQ---KHTVIIEHLVTEGTVDEDILR 423 Query: 183 RLRTKSTIQDLLLNALK 199 + K Q+ ++ A+K Sbjct: 424 AIEKKDNTQNAMIEAVK 440 >gi|308174984|ref|YP_003921689.1| SWI/SNF chromatin-remodeling complex subunit snf22 [Bacillus amyloliquefaciens DSM 7] gi|307607848|emb|CBI44219.1| SWI/SNF chromatin-remodeling complex subunit snf22 SWI/SNF complex subunit snf22; ATP-dependent helicase snf22 [Bacillus amyloliquefaciens DSM 7] Length = 451 Score = 151 bits (381), Expect = 6e-35, Method: Compositional matrix adjust. Identities = 83/197 (42%), Positives = 124/197 (62%), Gaps = 7/197 (3%) Query: 3 QYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVI 62 +Y + +++L ++ A +A + K LQLANGAVY DE +++HDEK+ ALE I Sbjct: 255 KYKQLEKDLLLPFLDGDVVADTAAVLSNKLLQLANGAVY-DENGEIQKLHDEKLNALEDI 313 Query: 63 IEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHG 122 ++ AN PI+V Y + DL R+Q+ F + + LD I +WN GKI +L AHPAS GHG Sbjct: 314 VDAANGKPILVFYSYKHDLERIQQKFKKAKPLDSS-REIADWNNGKIEMLLAHPASTGHG 372 Query: 123 LNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQ 182 LNLQ GG+++V+F + W LE +QQ R+ RQ G K +V V +L+ + T+DE V++ Sbjct: 373 LNLQDGGHVIVWFGMTWSLELYQQANARL----DRQ-GQKHSVIVNHLVTEGTVDEDVMR 427 Query: 183 RLRTKSTIQDLLLNALK 199 L K+ Q+ L+ A+K Sbjct: 428 ALEGKAVGQNALMEAVK 444 >gi|315656930|ref|ZP_07909817.1| SNF2 domain protein [Mobiluncus curtisii subsp. holmesii ATCC 35242] gi|315492885|gb|EFU82489.1| SNF2 domain protein [Mobiluncus curtisii subsp. holmesii ATCC 35242] Length = 458 Score = 151 bits (381), Expect = 7e-35, Method: Compositional matrix adjust. Identities = 90/204 (44%), Positives = 123/204 (60%), Gaps = 8/204 (3%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEV 61 K Y + + +L DL G I+A N+A+ + K LQLA+GA+Y W VH+ K+ LE Sbjct: 254 KVYEQLKADLVLDLDGATIDAANAAALSGKLLQLASGAIY-TSNGQWTAVHERKLDVLED 312 Query: 62 IIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGH 121 +IE AN P++VAY F D R+ FPQ R L K I+ WN+G+I L HPAS GH Sbjct: 313 LIEAANGNPLLVAYWFTHDRQRITARFPQAREL-KTSADIETWNKGEITLGLIHPASAGH 371 Query: 122 GLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVL 181 GLNLQ GG++LV+FSL W LE +QQ R+ RQ Q+ V + +L+A+ T+DE VL Sbjct: 372 GLNLQAGGHLLVWFSLTWSLELYQQTNARL--YRQGQS---EPVTITHLVAEGTLDEAVL 426 Query: 182 QRLRTKSTIQDLLLNALKKETIHV 205 + L K Q L++A+ E IH Sbjct: 427 KALDAKDATQAALIDAVAHE-IHT 449 >gi|317132765|ref|YP_004092079.1| SNF2-related protein [Ethanoligenens harbinense YUAN-3] gi|315470744|gb|ADU27348.1| SNF2-related protein [Ethanoligenens harbinense YUAN-3] Length = 450 Score = 150 bits (380), Expect = 7e-35, Method: Compositional matrix adjust. Identities = 85/198 (42%), Positives = 116/198 (58%), Gaps = 7/198 (3%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEV 61 K+Y + + +L +L G+ I A N+A+ T K QLANGA+Y D+ K E HD K+ ALE Sbjct: 256 KRYEELKNDLVLELHGDEITAANAATLTGKLSQLANGAIYSDDGK-IIEFHDRKLDALED 314 Query: 62 IIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGH 121 IIE AN P++VAY F DL R+++ F K I +WN G IP+ HPAS GH Sbjct: 315 IIEAANGKPLLVAYWFRHDLERIRRRFDVREI--KSSQDIDDWNAGNIPVAVIHPASAGH 372 Query: 122 GLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVL 181 GLNLQ GG+ LV+F L W LE +QQ R+ RQ R V + +++ +TID +L Sbjct: 373 GLNLQSGGSTLVWFGLTWSLELYQQTNARL----WRQGQKSRTVVIQHIVTASTIDGQIL 428 Query: 182 QRLRTKSTIQDLLLNALK 199 L+ K Q L+ A+K Sbjct: 429 NALKHKDKTQSALIAAVK 446 >gi|153814245|ref|ZP_01966913.1| hypothetical protein RUMTOR_00454 [Ruminococcus torques ATCC 27756] gi|145848641|gb|EDK25559.1| hypothetical protein RUMTOR_00454 [Ruminococcus torques ATCC 27756] Length = 457 Score = 150 bits (380), Expect = 8e-35, Method: Compositional matrix adjust. Identities = 82/197 (41%), Positives = 125/197 (63%), Gaps = 9/197 (4%) Query: 4 YHKFQRELYCDL-QGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVI 62 Y + E+ + +G++I+A N+A+ + K Q+ANGAVY DE + + +HD K+ ALE + Sbjct: 252 YDRMADEMILEYGEGQDIDAVNAAALSNKLQQMANGAVY-DESGNVRNIHDRKLDALEDL 310 Query: 63 IEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHG 122 +E AN P++VAY F D R+ K FP R ++ I++WNEGKIP+ HPAS GHG Sbjct: 311 VESANGKPLLVAYWFKHDRERILKRFP-ARDINTKK-DIEDWNEGKIPVALIHPASAGHG 368 Query: 123 LNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQ 182 LNLQ GG+ +V+FSL W LE +QQ+ R+ RQ G K V + +L+ + T+DE +L+ Sbjct: 369 LNLQEGGSTIVWFSLTWSLELYQQLNARL----YRQ-GQKHTVIIEHLVTEGTVDEDILR 423 Query: 183 RLRTKSTIQDLLLNALK 199 + K Q+ ++ A+K Sbjct: 424 AIEKKDNTQNAMIEAVK 440 >gi|116630100|ref|YP_815272.1| SNF2 family DNA/RNA helicase [Lactobacillus gasseri ATCC 33323] gi|116095682|gb|ABJ60834.1| Superfamily II DNA/RNA helicase, SNF2 family [Lactobacillus gasseri ATCC 33323] Length = 450 Score = 150 bits (379), Expect = 1e-34, Method: Compositional matrix adjust. Identities = 83/196 (42%), Positives = 123/196 (62%), Gaps = 8/196 (4%) Query: 4 YHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVII 63 Y + +L QG+ I+A N+AS + K Q+ANG VY D+++ ++H K+ ALE ++ Sbjct: 254 YDELNAQLVVSTQGKQIDALNAASLSNKLCQMANGCVY-DDQQQVVQIHQRKLDALEDLV 312 Query: 64 EKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGL 123 E AN P+++AY F DLA++++ F Q R + K I +WN GKIPL HPAS GHGL Sbjct: 313 EAANGKPVLIAYWFKHDLAQIKQRF-QVREI-KTTQDINDWNAGKIPLALIHPASAGHGL 370 Query: 124 NLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQR 183 NLQ GG+ L+++ L W LE +QQ R+ RQ G ++ V +Y+LI + TIDE ++ Sbjct: 371 NLQAGGSTLIWYGLTWSLELYQQTNARLW--RQ---GQQQPVVIYHLITEGTIDENIMTA 425 Query: 184 LRTKSTIQDLLLNALK 199 L+ K Q L+NA+K Sbjct: 426 LKQKDKTQLALINAVK 441 >gi|320530608|ref|ZP_08031660.1| protein, SNF2 family [Selenomonas artemidis F0399] gi|320137135|gb|EFW29065.1| protein, SNF2 family [Selenomonas artemidis F0399] Length = 429 Score = 150 bits (379), Expect = 1e-34, Method: Compositional matrix adjust. Identities = 81/199 (40%), Positives = 123/199 (61%), Gaps = 7/199 (3%) Query: 1 MKQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 M++Y + +REL + +I A +A+ T K LQ+ANG+VY DE+ +H+ K AL+ Sbjct: 226 MRKYAEMERELVLSIGASDITAVTAAALTGKLLQMANGSVY-DEDGEAVTIHEAKADALD 284 Query: 61 VIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCG 120 II ++ Y + D A L + P+ R L K P I++WN GKI LL HPAS G Sbjct: 285 EIIACNEGKSVMAIYSYRHDRATLLRRHPEAREL-KTPEDIRDWNAGKISLLLVHPASAG 343 Query: 121 HGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELV 180 HGLNLQ+GG+I+V++ L W LE++QQ +R+ + G V +++LIA++T+DE V Sbjct: 344 HGLNLQHGGHIVVWYGLTWSLEQYQQTNKRL-----HRPGQTEPVILHHLIAKDTVDEDV 398 Query: 181 LQRLRTKSTIQDLLLNALK 199 ++ L KST Q+ +L A+K Sbjct: 399 MRALERKSTGQEGMLQAVK 417 >gi|238854134|ref|ZP_04644481.1| superfamily II DNA/RNA helicase, SNF2 family [Lactobacillus gasseri 202-4] gi|238833210|gb|EEQ25500.1| superfamily II DNA/RNA helicase, SNF2 family [Lactobacillus gasseri 202-4] Length = 450 Score = 149 bits (377), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 82/196 (41%), Positives = 123/196 (62%), Gaps = 8/196 (4%) Query: 4 YHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVII 63 Y + +L QG+ I+A N+AS + K Q+ANG VY D+++ ++H K+ A+E ++ Sbjct: 254 YDELNAQLVVSTQGKQIDALNAASLSNKLCQMANGCVY-DDQQQVVQIHQRKLDAIEDLV 312 Query: 64 EKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGL 123 E AN P+++AY F DLA++++ F Q R + K I +WN GKIPL HPAS GHGL Sbjct: 313 EAANGKPVLIAYWFKHDLAQIKQRF-QVREI-KTTQDINDWNAGKIPLALIHPASAGHGL 370 Query: 124 NLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQR 183 NLQ GG+ L+++ L W LE +QQ R+ RQ G ++ V +Y+LI + TIDE ++ Sbjct: 371 NLQAGGSTLIWYGLTWSLELYQQTNARLW--RQ---GQQQPVVIYHLITEGTIDENIMTA 425 Query: 184 LRTKSTIQDLLLNALK 199 L+ K Q L+NA+K Sbjct: 426 LKQKDKTQLALINAVK 441 >gi|298346380|ref|YP_003719067.1| helicase [Mobiluncus curtisii ATCC 43063] gi|298236441|gb|ADI67573.1| helicase [Mobiluncus curtisii ATCC 43063] Length = 452 Score = 149 bits (377), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 88/205 (42%), Positives = 124/205 (60%), Gaps = 11/205 (5%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEV 61 K Y + E+ +L E I+A N+A K QLA+GA+Y E VH K+ ALE Sbjct: 254 KVYDRLAAEMVVELGDEVIDAANAAVLAGKLTQLASGAIY-TEAGDSIVVHGRKLDALED 312 Query: 62 IIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGH 121 +IE AN P++VAY + DLAR+++ FPQ R L K I+ WN G+IPL HPAS GH Sbjct: 313 LIEAANGNPVLVAYWWQHDLARIRERFPQARQL-KTSADIEAWNGGEIPLGLIHPASAGH 371 Query: 122 GLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVL 181 GLNLQ GG+IL+++SL W LE HQQ R+ RQ G + V + ++ +++ID+ +L Sbjct: 372 GLNLQQGGSILIWYSLTWSLELHQQTNARL----YRQ-GQTKPVTITHIATKDSIDQQIL 426 Query: 182 QRLRTKSTIQDLLLNA----LKKET 202 + L +K+ Q L++A LK ET Sbjct: 427 RALESKNMTQSALIDAVAQTLKGET 451 >gi|42779467|ref|NP_976714.1| phage-associated helicase [Bacillus cereus ATCC 10987] gi|42735383|gb|AAS39322.1| phage-associated helicase [Bacillus cereus ATCC 10987] Length = 453 Score = 149 bits (377), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 83/196 (42%), Positives = 121/196 (61%), Gaps = 8/196 (4%) Query: 4 YHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVII 63 Y +F+ E+ + E I+A N+A + K LQ+ANGA+Y D++K+ +HD K+ ALE +I Sbjct: 256 YDRFREEMVLEFADEEIDAMNAAVLSGKLLQMANGAIY-DDDKNTHIIHDRKLDALEDLI 314 Query: 64 EKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGL 123 E AN P+++AY +N DL R++ F R + K I++WN G I + HPAS GHGL Sbjct: 315 EGANGKPVLIAYWYNHDLERIKAKF-NVREI-KTSKDIKDWNNGDISVAVIHPASAGHGL 372 Query: 124 NLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQR 183 NLQ GG+ L++F L W LE +QQ R+ RQ G V ++++I + TIDE V+ Sbjct: 373 NLQSGGSTLIWFGLTWSLELYQQTNARL----WRQ-GQNETVVIHHIITKGTIDEDVMNA 427 Query: 184 LRTKSTIQDLLLNALK 199 LR K Q L+NA+K Sbjct: 428 LRRKEKTQSDLINAVK 443 >gi|313898006|ref|ZP_07831545.1| SNF2 family N-terminal domain protein [Clostridium sp. HGF2] gi|312957034|gb|EFR38663.1| SNF2 family N-terminal domain protein [Clostridium sp. HGF2] Length = 447 Score = 149 bits (376), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 85/199 (42%), Positives = 117/199 (58%), Gaps = 7/199 (3%) Query: 1 MKQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 + +Y + + +L +L I A N+AS T K QLANGA+Y D + E HD K+ ALE Sbjct: 253 VARYEELKSDLVLELPDGEITAANAASLTGKLSQLANGAIYSDTGE-IIEFHDRKLDALE 311 Query: 61 VIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCG 120 IIE AN P++VAY F DL+R++K F K I +WN GKIP+ HPAS G Sbjct: 312 DIIESANGKPVLVAYWFKHDLSRIKKRFDVREI--KSSKDITDWNAGKIPVAVIHPASAG 369 Query: 121 HGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELV 180 HGLNLQ GG+ L++F L W LE +QQ R+ RQ V + ++I + TIDE + Sbjct: 370 HGLNLQAGGSTLIWFGLTWSLELYQQTNARL----WRQGQTSGTVVIEHIITKGTIDERI 425 Query: 181 LQRLRTKSTIQDLLLNALK 199 L+ L K Q+ L++A+K Sbjct: 426 LKALSKKELTQNALIDAVK 444 >gi|323484110|ref|ZP_08089480.1| SNF2-like protein [Clostridium symbiosum WAL-14163] gi|323402552|gb|EGA94880.1| SNF2-like protein [Clostridium symbiosum WAL-14163] Length = 455 Score = 149 bits (375), Expect = 3e-34, Method: Compositional matrix adjust. Identities = 82/199 (41%), Positives = 124/199 (62%), Gaps = 8/199 (4%) Query: 1 MKQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 M YH+ ++++ + +I+A N+A + K +Q+ANGAVY DE K +HD K++ALE Sbjct: 251 MNLYHQLEKDMLVPYEDGDIDAVNAAGLSNKLMQMANGAVY-DENGAVKHIHDRKLEALE 309 Query: 61 VIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCG 120 ++E AN P++VAY + DLAR++ LD ++WN G+IP+ HPAS G Sbjct: 310 DLVEAANGKPVLVAYWYKHDLARIRDRLGVAE-LDAAE-DFRKWNAGEIPVAVIHPASAG 367 Query: 121 HGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELV 180 HGLNLQ GG+ L++F L W LE +QQM R+ RQ Q K V +++LIA++T+DE V Sbjct: 368 HGLNLQTGGSTLIWFGLTWSLELYQQMNARL--WRQGQ---KETVVIHHLIAKDTLDERV 422 Query: 181 LQRLRTKSTIQDLLLNALK 199 + L K Q L++A++ Sbjct: 423 MTALEKKDCGQSALVDAVR 441 >gi|259502599|ref|ZP_05745501.1| SNF2 domain protein [Lactobacillus antri DSM 16041] gi|259169414|gb|EEW53909.1| SNF2 domain protein [Lactobacillus antri DSM 16041] Length = 451 Score = 148 bits (373), Expect = 5e-34, Method: Compositional matrix adjust. Identities = 82/196 (41%), Positives = 119/196 (60%), Gaps = 8/196 (4%) Query: 4 YHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVII 63 Y + +L QG+ I+A N+AS + K Q+ANG VY D+++ ++H K+ ALE +I Sbjct: 255 YDELNAQLVVSTQGKQIDALNAASLSNKLCQMANGCVY-DDQQQIVQIHQRKLDALEDLI 313 Query: 64 EKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGL 123 E AN P++VAY F DL+++++ F R + K IQ+WN G IPL HPAS GHGL Sbjct: 314 EAANGKPVLVAYWFKHDLSQIKQRF-TAREI-KTVKDIQDWNAGNIPLALIHPASAGHGL 371 Query: 124 NLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQR 183 NLQ GG L+++ L W LE +QQ R+ QRQ V ++++I + TIDE +L Sbjct: 372 NLQAGGATLIWYGLTWSLELYQQTNARLWRQGQRQ-----TVVIHHIITEGTIDENILAA 426 Query: 184 LRTKSTIQDLLLNALK 199 L+ K Q L+NA+K Sbjct: 427 LKRKDKTQLALINAVK 442 >gi|304439204|ref|ZP_07399122.1| SNF2 domain protein [Peptoniphilus duerdenii ATCC BAA-1640] gi|304372336|gb|EFM25924.1| SNF2 domain protein [Peptoniphilus duerdenii ATCC BAA-1640] Length = 448 Score = 147 bits (372), Expect = 7e-34, Method: Compositional matrix adjust. Identities = 81/196 (41%), Positives = 127/196 (64%), Gaps = 8/196 (4%) Query: 4 YHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVII 63 Y +++L +++ ++I+A N+A+ + K LQ+A+G+VY DE K+ +H+ K+ ALE +I Sbjct: 256 YETLKKDLVVNIKDKDIDAVNAAALSNKLLQMASGSVY-DEYKNMIHIHNRKLDALEDLI 314 Query: 64 EKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGL 123 E AN P+++AY + SDL R++ F R L K +EWN+ KIP+ HPAS GHGL Sbjct: 315 EGANGKPVLIAYWYKSDLKRIKDRF-DVREL-KTSEDFKEWNQSKIPVAVIHPASAGHGL 372 Query: 124 NLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQR 183 NLQ GG+ L++FSL W LE ++Q R+ RQ G K V +++++A+ TIDE V++ Sbjct: 373 NLQAGGSTLIWFSLTWSLELYEQTNARL----YRQ-GQKETVVIHHILAKGTIDEDVMKA 427 Query: 184 LRTKSTIQDLLLNALK 199 L K+ Q L+ A+K Sbjct: 428 LENKNKTQAALIEAVK 443 >gi|219855697|ref|YP_002472819.1| hypothetical protein CKR_2354 [Clostridium kluyveri NBRC 12016] gi|219569421|dbj|BAH07405.1| hypothetical protein [Clostridium kluyveri NBRC 12016] Length = 469 Score = 147 bits (372), Expect = 7e-34, Method: Compositional matrix adjust. Identities = 83/196 (42%), Positives = 120/196 (61%), Gaps = 8/196 (4%) Query: 4 YHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVII 63 Y F+ E+ + E I+A N+A + K LQ+ANGA+Y D++K+ +HD K+ ALE +I Sbjct: 272 YDHFREEMVFEFADEEIDAMNAAVLSGKLLQMANGAIY-DDDKNTHIIHDRKLDALEDLI 330 Query: 64 EKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGL 123 E AN P+++AY +N DL R++ F R + K I++WN G I + HPAS GHGL Sbjct: 331 EGANGKPVLIAYWYNHDLERIKAKF-NVREI-KTSKDIKDWNNGDISVAVIHPASAGHGL 388 Query: 124 NLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQR 183 NLQ GG+ L++F L W LE +QQ R+ RQ G V ++++I + TIDE V+ Sbjct: 389 NLQSGGSTLIWFGLTWSLELYQQTNARL----WRQ-GQNETVVIHHIITKGTIDEDVMNA 443 Query: 184 LRTKSTIQDLLLNALK 199 LR K Q L+NA+K Sbjct: 444 LRRKEKTQSDLINAVK 459 >gi|307317157|ref|ZP_07596598.1| DEAD-like helicase [Sinorhizobium meliloti AK83] gi|306897245|gb|EFN27990.1| DEAD-like helicase [Sinorhizobium meliloti AK83] Length = 522 Score = 147 bits (372), Expect = 7e-34, Method: Compositional matrix adjust. Identities = 79/205 (38%), Positives = 123/205 (60%), Gaps = 12/205 (5%) Query: 1 MKQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVY------YDEEKHWKEVHDE 54 MK+Y +F++ L Q ++EA + T K LQ ANG +Y ++ ++ +HD Sbjct: 319 MKEYREFEKTLVA--QNYDVEAVSRGVLTGKLLQFANGGLYRLDEDVFNAKRETIAIHDY 376 Query: 55 KIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFA 114 K+KALE I+E+A ++VAY F D R++K FP+ D++P +++WN GKI + A Sbjct: 377 KLKALESIVEEAAGQNVLVAYSFQFDKDRIRKKFPKAVFFDEEPNFVKKWNAGKIQMGVA 436 Query: 115 HPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQN 174 HPAS GHGLNLQ+GG+I V+F L W LE Q R+ Q+ +VF++ +IA+ Sbjct: 437 HPASIGHGLNLQHGGHIQVWFGLTWSLELWDQFNRRLARPGQKN----HSVFIHVIIAKG 492 Query: 175 TIDELVLQRLRTKSTIQDLLLNALK 199 T+DE + L+ K QD ++NA++ Sbjct: 493 TMDEAQYETLQIKGVTQDQIMNAVR 517 >gi|153955274|ref|YP_001396039.1| Phage-related DNA helicase [Clostridium kluyveri DSM 555] gi|146348132|gb|EDK34668.1| Predicted Phage-related DNA helicase [Clostridium kluyveri DSM 555] Length = 453 Score = 147 bits (371), Expect = 8e-34, Method: Compositional matrix adjust. Identities = 83/196 (42%), Positives = 120/196 (61%), Gaps = 8/196 (4%) Query: 4 YHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVII 63 Y F+ E+ + E I+A N+A + K LQ+ANGA+Y D++K+ +HD K+ ALE +I Sbjct: 256 YDHFREEMVFEFADEEIDAMNAAVLSGKLLQMANGAIY-DDDKNTHIIHDRKLDALEDLI 314 Query: 64 EKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGL 123 E AN P+++AY +N DL R++ F R + K I++WN G I + HPAS GHGL Sbjct: 315 EGANGKPVLIAYWYNHDLERIKAKF-NVREI-KTSKDIKDWNNGDISVAVIHPASAGHGL 372 Query: 124 NLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQR 183 NLQ GG+ L++F L W LE +QQ R+ RQ G V ++++I + TIDE V+ Sbjct: 373 NLQSGGSTLIWFGLTWSLELYQQTNARL----WRQ-GQNETVVIHHIITKGTIDEDVMNA 427 Query: 184 LRTKSTIQDLLLNALK 199 LR K Q L+NA+K Sbjct: 428 LRRKEKTQSDLINAVK 443 >gi|255306562|ref|ZP_05350733.1| SNF2-related protein [Clostridium difficile ATCC 43255] Length = 456 Score = 147 bits (371), Expect = 9e-34, Method: Compositional matrix adjust. Identities = 86/201 (42%), Positives = 125/201 (62%), Gaps = 9/201 (4%) Query: 1 MKQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 +K Y + ++E +L + I A ++A K LQLANGA+Y D +K+ KE+H EK++AL+ Sbjct: 255 LKYYKELEKEKILELDKDIITASSAAVAANKLLQLANGAIY-DNDKNVKELHREKLEALK 313 Query: 61 VIIEKANAAPIIVAYHFNSDLARLQKAFP--QGRTLDKDPCTIQEWNEGKIPLLFAHPAS 118 II+ +N PII+ Y++ D RL K F + RT++ + I +WN G+I LL HPAS Sbjct: 314 EIIDVSNGKPIIIFYNYKHDYNRLMKEFKSLKPRTIE-NSKDIYDWNNGRIQLLLCHPAS 372 Query: 119 CGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDE 178 GHGLNLQ GG+I+V+F L W LE +QQ R+ QR+ V +++LI + TIDE Sbjct: 373 TGHGLNLQSGGSIIVWFGLTWSLELYQQANARLYRQGQRE-----TVIIHHLICKGTIDE 427 Query: 179 LVLQRLRTKSTIQDLLLNALK 199 V++ L K Q LL A+K Sbjct: 428 QVMEALENKDKGQSALLEAVK 448 >gi|254975145|ref|ZP_05271617.1| SNF2-related protein [Clostridium difficile QCD-66c26] gi|255092535|ref|ZP_05322013.1| SNF2-related protein [Clostridium difficile CIP 107932] gi|255314272|ref|ZP_05355855.1| SNF2-related protein [Clostridium difficile QCD-76w55] gi|255516952|ref|ZP_05384628.1| SNF2-related protein [Clostridium difficile QCD-97b34] gi|255650054|ref|ZP_05396956.1| SNF2-related protein [Clostridium difficile QCD-37x79] gi|260683194|ref|YP_003214479.1| phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase [Clostridium difficile CD196] gi|260686790|ref|YP_003217923.1| snf2-related protein [Clostridium difficile R20291] gi|306519589|ref|ZP_07405936.1| snf2-related protein [Clostridium difficile QCD-32g58] gi|260209357|emb|CBA62788.1| phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase [Clostridium difficile CD196] gi|260212806|emb|CBE03974.1| phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase [Clostridium difficile R20291] Length = 456 Score = 146 bits (369), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 86/201 (42%), Positives = 125/201 (62%), Gaps = 9/201 (4%) Query: 1 MKQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 +K Y + ++E +L + I A ++A K LQLANGA+Y D +K+ KE+H EK++AL+ Sbjct: 255 LKYYKELEKEKILELDRDIITASSAAVAANKLLQLANGAIY-DNDKNVKELHREKLEALK 313 Query: 61 VIIEKANAAPIIVAYHFNSDLARLQKAFP--QGRTLDKDPCTIQEWNEGKIPLLFAHPAS 118 II+ +N PIIV Y++ D RL K F + RT++ + I +WN G+I LL HPAS Sbjct: 314 EIIDVSNGKPIIVFYNYKHDYNRLMKEFKSLKPRTIE-NSKDIYDWNNGRIQLLLCHPAS 372 Query: 119 CGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDE 178 GHGLNLQ GG+I+V+F L W LE +QQ R+ QR+ V +++LI + TIDE Sbjct: 373 TGHGLNLQSGGSIIVWFGLTWSLELYQQANARLYRQGQRE-----TVIIHHLICKGTIDE 427 Query: 179 LVLQRLRTKSTIQDLLLNALK 199 V++ + K Q LL A+K Sbjct: 428 QVMEAIENKDKGQSALLEAVK 448 >gi|134299061|ref|YP_001112557.1| SNF2-like protein [Desulfotomaculum reducens MI-1] gi|134051761|gb|ABO49732.1| SNF2-related protein [Desulfotomaculum reducens MI-1] Length = 454 Score = 146 bits (368), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 85/198 (42%), Positives = 124/198 (62%), Gaps = 7/198 (3%) Query: 3 QYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVI 62 QY + +R+L L ++ A +A K LQ+ANGAVY DE +E H K++ALE + Sbjct: 255 QYEQLERDLLLPLADGDVVANTAAVLANKLLQMANGAVY-DENGMAQEFHKAKLEALEGV 313 Query: 63 IEKANAAPIIVAYHFNSDLARLQKAFPQGRTLD-KDPCTIQEWNEGKIPLLFAHPASCGH 121 IE+A P++V Y + DL R+++ F Q + + K I+ WN+GK+ ++ AHPAS GH Sbjct: 314 IEEAAGKPVLVFYSYRHDLDRIKEHFKQYKPKELKTAEDIKNWNDGKVQIMLAHPASAGH 373 Query: 122 GLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVL 181 GLNLQ GGNI+ +FS W LE +QQ R+ RQ G +RAV +++L+A+ TIDE V+ Sbjct: 374 GLNLQAGGNIIAWFSTPWSLELYQQANARL----HRQ-GQQRAVIIHHLVAKGTIDEDVI 428 Query: 182 QRLRTKSTIQDLLLNALK 199 + L K Q+ LL A+K Sbjct: 429 RVLGYKERGQNALLEAVK 446 >gi|256847828|ref|ZP_05553273.1| superfamily II DNA/RNA helicase [Lactobacillus coleohominis 101-4-CHN] gi|256715517|gb|EEU30493.1| superfamily II DNA/RNA helicase [Lactobacillus coleohominis 101-4-CHN] Length = 451 Score = 146 bits (368), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 80/196 (40%), Positives = 117/196 (59%), Gaps = 8/196 (4%) Query: 4 YHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVII 63 Y + +L QG+ I+ N+ S + K Q+ANG VY D+++ ++H K+ ALE ++ Sbjct: 255 YDELNAQLVVSTQGKQIDVLNATSLSNKLCQMANGCVY-DDQQQIVQIHQRKLDALEDLV 313 Query: 64 EKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGL 123 E AN P++VAY F DL +++ F + R + K P IQ+WN G IPL HPAS GHGL Sbjct: 314 EAANGKPVLVAYWFKHDLIQIKSRF-KVREI-KTPRDIQDWNAGNIPLALIHPASAGHGL 371 Query: 124 NLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQR 183 NLQ GG L+++ L W LE +QQ R+ QRQ V ++++I + TIDE +L Sbjct: 372 NLQAGGATLIWYGLTWSLELYQQTNARLWRQGQRQ-----PVVIHHIITEGTIDENILAA 426 Query: 184 LRTKSTIQDLLLNALK 199 L+ K Q L+NA+K Sbjct: 427 LKRKDKTQLALINAVK 442 >gi|220930213|ref|YP_002507122.1| SNF2-related protein [Clostridium cellulolyticum H10] gi|220000541|gb|ACL77142.1| SNF2-related protein [Clostridium cellulolyticum H10] Length = 453 Score = 146 bits (368), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 83/196 (42%), Positives = 120/196 (61%), Gaps = 8/196 (4%) Query: 4 YHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVII 63 Y F+ E+ + E I+A N+A + K LQ+ANGA+Y D++K +HD K+ ALE +I Sbjct: 256 YDHFREEMVLEFGDEEIDAMNAAVLSGKLLQMANGAIY-DDDKKPHIIHDRKLDALEDLI 314 Query: 64 EKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGL 123 E AN P+++AY +N DL R++ F R + K I++WN G I + HPAS GHGL Sbjct: 315 EGANGKPVLIAYWYNHDLERIKAKF-NVREI-KTSKDIKDWNNGDISVAVIHPASAGHGL 372 Query: 124 NLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQR 183 NLQ GG+ L++F L W LE +QQ R+ RQ G K V ++++I + TIDE V+ Sbjct: 373 NLQSGGSTLIWFGLTWSLELYQQTNARL----WRQ-GQKETVVIHHIITKGTIDEDVMGA 427 Query: 184 LRTKSTIQDLLLNALK 199 L+ K Q L+NA+K Sbjct: 428 LKRKEKTQTDLINAVK 443 >gi|288799809|ref|ZP_06405268.1| SNF2 domain protein [Prevotella sp. oral taxon 299 str. F0039] gi|288333057|gb|EFC71536.1| SNF2 domain protein [Prevotella sp. oral taxon 299 str. F0039] Length = 458 Score = 145 bits (367), Expect = 3e-33, Method: Compositional matrix adjust. Identities = 82/202 (40%), Positives = 129/202 (63%), Gaps = 10/202 (4%) Query: 2 KQYHKFQRELYCDL---QGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKA 58 K Y+KF+R+ +L + E I A ++A+ + K LQ + GA+Y DE+ + +H +K++A Sbjct: 256 KDYNKFERDCVLELFTEEDETITAASAAALSNKLLQFSGGAIY-DEDHNTHVIHTKKLEA 314 Query: 59 LEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD-PCTIQEWNEGKIPLLFAHPA 117 LE ++E AN PI++ Y F + +R+ + F R + D P TI+ WN+G+I + AHPA Sbjct: 315 LEDVVEAANGQPILLFYAFKHEESRIIEHFKNLRVVKLDTPETIKAWNKGEIDIAIAHPA 374 Query: 118 SCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 S GHGLNLQ+GGNI+V++ L W LE +QQ R+ RQ G + V +Y+LI++ TID Sbjct: 375 SVGHGLNLQHGGNIIVWYGLTWSLELYQQANARL----HRQ-GQSKPVKIYHLISEGTID 429 Query: 178 ELVLQRLRTKSTIQDLLLNALK 199 E +++ L K Q+ L+ A+K Sbjct: 430 EEIVKALSNKDKTQNGLMQAVK 451 >gi|297585287|ref|YP_003701067.1| SNF2-like protein [Bacillus selenitireducens MLS10] gi|297143744|gb|ADI00502.1| SNF2-related protein [Bacillus selenitireducens MLS10] Length = 460 Score = 145 bits (366), Expect = 3e-33, Method: Compositional matrix adjust. Identities = 85/202 (42%), Positives = 127/202 (62%), Gaps = 13/202 (6%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEV 61 + Y + ++E + ++ A ++A K LQLANGA+Y DE +EVHDEK++AL+ Sbjct: 254 RAYTQLEKEWLLAFEDADVLAGSAAVVANKLLQLANGAIY-DETGDVQEVHDEKLEALKE 312 Query: 62 IIEKANAAPIIVAYHFNSDLARLQK---AF-PQGRTLDKDPCTIQEWNEGKIPLLFAHPA 117 +IE AN P++V Y++ D R+ K AF P+ D+D I++WN+G +P+L AHPA Sbjct: 313 LIESANGKPVLVYYNYQHDRDRILKHLKAFKPRVLKTDQD---IRDWNKGNVPVLLAHPA 369 Query: 118 SCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 S GHGLNLQ GG+++V+F L W LE +QQ R+ RQ G V V++LI + T+D Sbjct: 370 SAGHGLNLQAGGHVMVWFGLNWSLELYQQANARL----HRQ-GQTETVVVHHLITKGTMD 424 Query: 178 ELVLQRLRTKSTIQDLLLNALK 199 E V+ L+ K T Q+ L+ A+K Sbjct: 425 ERVMAALKQKDTSQEALIAAVK 446 >gi|217965845|ref|YP_002351523.1| SNF2 domain protein [Listeria monocytogenes HCC23] gi|217335115|gb|ACK40909.1| SNF2 domain protein [Listeria monocytogenes HCC23] gi|307569607|emb|CAR82786.1| SNF2/RAD54 helicase family protein [Listeria monocytogenes L99] Length = 463 Score = 145 bits (366), Expect = 3e-33, Method: Compositional matrix adjust. Identities = 81/198 (40%), Positives = 129/198 (65%), Gaps = 7/198 (3%) Query: 3 QYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVI 62 QY + ++E + + ++ A ++A + K LQLANGA+Y DE + ++E+H++K++AL I Sbjct: 259 QYSELEKEFLLEFEHSDVVADSAAVLSNKLLQLANGAIY-DENQEYQEIHNKKLEALADI 317 Query: 63 IEKANAAPIIVAYHFNSDLARLQKAFPQGRTLD-KDPCTIQEWNEGKIPLLFAHPASCGH 121 IE++ P++V Y + D R+ Q + KD +I++WN GK +L AHPAS GH Sbjct: 318 IEESVGQPVLVFYSYKHDEKRILNHLKQYKPEKIKDSRSIRKWNAGKTRVLLAHPASAGH 377 Query: 122 GLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVL 181 GLNLQ GG+I+V+F L W LE +QQ R+ RQ G K++V V++++A++T+DE V+ Sbjct: 378 GLNLQDGGHIVVWFGLTWSLELYQQANARL--FRQ---GQKKSVIVHHIVAKDTLDEKVI 432 Query: 182 QRLRTKSTIQDLLLNALK 199 + L +K QD LL A+K Sbjct: 433 EALSSKKVGQDALLEAVK 450 >gi|57234142|ref|YP_181811.1| SNF2 domain-containing protein [Dehalococcoides ethenogenes 195] gi|57224590|gb|AAW39647.1| SNF2 domain protein [Dehalococcoides ethenogenes 195] Length = 448 Score = 145 bits (365), Expect = 4e-33, Method: Compositional matrix adjust. Identities = 85/201 (42%), Positives = 116/201 (57%), Gaps = 7/201 (3%) Query: 3 QYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVI 62 +Y ++E L + A N+AS T K QLANGA+Y D + E HD K+ ALE I Sbjct: 255 RYEDLKQEFILQLPDGEVTAANAASLTGKLSQLANGAIYADTGE-IIEFHDRKLDALEDI 313 Query: 63 IEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHG 122 IE AN P++VAY F DL+R++ F R + K I +WN GKIP+ HPAS GHG Sbjct: 314 IEAANEKPLLVAYWFRHDLSRIKNRF-NVREI-KTSRDIADWNAGKIPVAVIHPASAGHG 371 Query: 123 LNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQ 182 LNLQ GG+ LV+F L W LE +QQ R+ RQ V + ++I + TIDE +++ Sbjct: 372 LNLQAGGSTLVWFGLTWSLELYQQTNARL----WRQGQESHTVVIQHIITKGTIDERIMR 427 Query: 183 RLRTKSTIQDLLLNALKKETI 203 L K Q L++A+K E + Sbjct: 428 ALTKKELTQSALIDAVKAEVV 448 >gi|304436366|ref|ZP_07396342.1| SNF2 domain protein [Selenomonas sp. oral taxon 149 str. 67H29BP] gi|304370635|gb|EFM24284.1| SNF2 domain protein [Selenomonas sp. oral taxon 149 str. 67H29BP] Length = 447 Score = 145 bits (365), Expect = 5e-33, Method: Compositional matrix adjust. Identities = 81/200 (40%), Positives = 112/200 (56%), Gaps = 7/200 (3%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEV 61 K Y +L ++G+ + A N+ + K Q+ANG VY D+ +HD K+ ALE Sbjct: 252 KMYDSMCEQLVLQMKGDEVTAANAGVLSGKLAQMANGTVYTDDGSTL-HIHDRKLDALED 310 Query: 62 IIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGH 121 IIE N P++V Y F D R++K P R LD D I WN G+I + HPAS GH Sbjct: 311 IIESMNGKPLLVPYWFRHDAERIEKRLPCVR-LDTDDA-IARWNRGEISVALIHPASAGH 368 Query: 122 GLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVL 181 GLNLQ GG+ LV+F + W LE +QQ + R+ RQ V V ++IA+ TIDE +L Sbjct: 369 GLNLQSGGSTLVWFGITWSLELYQQTVARL----YRQGQNSNTVVVQHIIAEGTIDERIL 424 Query: 182 QRLRTKSTIQDLLLNALKKE 201 + L+ K Q L+ A+K E Sbjct: 425 RALKRKDKTQTALIEAVKAE 444 >gi|57233543|ref|YP_180823.1| SNF2 family helicase [Dehalococcoides ethenogenes 195] gi|57223991|gb|AAW39048.1| SNF2 family helicase, putative [Dehalococcoides ethenogenes 195] Length = 513 Score = 144 bits (364), Expect = 6e-33, Method: Compositional matrix adjust. Identities = 85/204 (41%), Positives = 123/204 (60%), Gaps = 10/204 (4%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEV 61 ++Y + +++L L +I A N+A+ T K QLANGA+Y D+ + +HD K+ ALE Sbjct: 313 QRYDELKQDLVLQLPDGDITAANAAALTGKLCQLANGAIYTDDGDTFT-IHDRKLDALEN 371 Query: 62 IIEKANAAPIIVAYHFNSDLAR----LQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPA 117 IIE A+ PI+VAY F DLAR LQK LD +I++WN G++P+ HPA Sbjct: 372 IIEAASGKPILVAYWFKHDLARITERLQKLHIPFSKLDSAD-SIRKWNAGELPVALIHPA 430 Query: 118 SCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 S GHGLNLQ GG+ +V+F L W LE +QQ R+ RQ V V +++A++TID Sbjct: 431 SAGHGLNLQSGGSCIVWFGLTWSLELYQQTNARL----WRQGQNAETVVVQHIVAKDTID 486 Query: 178 ELVLQRLRTKSTIQDLLLNALKKE 201 E +L+ L K + Q L+ A+K + Sbjct: 487 ERILKVLSKKDSTQAALIAAVKAD 510 >gi|300764700|ref|ZP_07074691.1| phage-associated helicase [Listeria monocytogenes FSL N1-017] gi|300514586|gb|EFK41642.1| phage-associated helicase [Listeria monocytogenes FSL N1-017] Length = 451 Score = 144 bits (363), Expect = 7e-33, Method: Compositional matrix adjust. Identities = 83/198 (41%), Positives = 122/198 (61%), Gaps = 8/198 (4%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEV 61 ++Y +F+ +L L+ I+A N+A + K LQ+ANGA+Y DE +HD+K+ ALE Sbjct: 255 QKYDEFKADLVLQLKEATIDAANTAVLSNKLLQMANGAIY-DEFNVSHHIHDQKLDALED 313 Query: 62 IIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGH 121 +IE N PI++AY F DL R+++ F + K I +WNEG IP+ HPAS GH Sbjct: 314 LIEGTNGKPILIAYWFQHDLERIKERFNVRQI--KTSQDIIDWNEGSIPIAVIHPASAGH 371 Query: 122 GLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVL 181 GLNLQ GG+ LV+F L W LE + Q R+ RQ Q+ V ++++IA++TIDE V+ Sbjct: 372 GLNLQAGGSTLVWFGLTWSLELYLQTNARLW--RQGQSD---TVVIHHIIAKDTIDEDVM 426 Query: 182 QRLRTKSTIQDLLLNALK 199 L+ K Q L++A+K Sbjct: 427 LALKRKDKTQSCLIDAVK 444 >gi|91214213|ref|NP_919000.2| helicase [Burkholderia phage BcepNazgul] gi|88604906|gb|AAQ63367.2| helicase [Burkholderia phage BcepNazgul] Length = 522 Score = 144 bits (362), Expect = 8e-33, Method: Compositional matrix adjust. Identities = 81/199 (40%), Positives = 118/199 (59%), Gaps = 9/199 (4%) Query: 4 YHKFQRELYCDL-QGENIEAFNSASKTVKCLQLANGAVYYDEEK-HWKEVHDEKIKALEV 61 Y KF+R+ DL G IEA +A+ K LQLA+G VY E+K HW VHD KI+ L Sbjct: 309 YKKFERDFILDLPDGTEIEAETAAALNQKLLQLASGCVYDAEKKTHW--VHDHKIEDLTQ 366 Query: 62 IIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGH 121 ++E+ N P++VAY F S L RL+KAFP+ R +D + + +WN+GKI +L HPAS H Sbjct: 367 LVEELNGEPLLVAYWFKSSLERLKKAFPRARVMDAEGKLVGDWNKGKIKILLVHPASVAH 426 Query: 122 GLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVL 181 GLN+Q GG+ L + +++ LE + Q+I R+ QR V V++ T+D++ + Sbjct: 427 GLNMQKGGHHLYIYDIFYSLELYLQLIGRLARQGQRH-----VVRVHHATMIGTVDDVAV 481 Query: 182 QRLRTKSTIQDLLLNALKK 200 L K QD L L++ Sbjct: 482 SSLTRKRNAQDDLFVRLRR 500 >gi|300909460|ref|ZP_07126921.1| SNF2 domain protein [Lactobacillus reuteri SD2112] gi|300893325|gb|EFK86684.1| SNF2 domain protein [Lactobacillus reuteri SD2112] Length = 451 Score = 144 bits (362), Expect = 9e-33, Method: Compositional matrix adjust. Identities = 83/196 (42%), Positives = 120/196 (61%), Gaps = 8/196 (4%) Query: 4 YHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVII 63 Y + +L QG+ I+A N+AS + K Q+ANG VY D+++ ++H K+ ALE ++ Sbjct: 255 YDELNAQLVVSAQGKQIDALNAASLSNKLCQMANGCVY-DDQQQIIQIHQRKLDALEDLV 313 Query: 64 EKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGL 123 E AN P++VAY F DL +++ F + R + K P IQ+WN GKIPL HPAS GHGL Sbjct: 314 EAANGKPVLVAYWFKHDLIQIKSRF-KVREI-KTPRDIQDWNAGKIPLALIHPASAGHGL 371 Query: 124 NLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQR 183 NLQ GG L+++ L W LE +QQ R+ QRQ V ++++I + TIDE +L Sbjct: 372 NLQAGGATLIWYGLTWSLELYQQTNARLWRQGQRQ-----PVVIHHIITEGTIDENILAA 426 Query: 184 LRTKSTIQDLLLNALK 199 L+ K Q L+NA+K Sbjct: 427 LKRKDKTQLALINAVK 442 >gi|317501093|ref|ZP_07959299.1| SNF2 domain-containing protein [Lachnospiraceae bacterium 8_1_57FAA] gi|316897480|gb|EFV19545.1| SNF2 domain-containing protein [Lachnospiraceae bacterium 8_1_57FAA] Length = 450 Score = 143 bits (361), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 85/199 (42%), Positives = 116/199 (58%), Gaps = 7/199 (3%) Query: 3 QYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVI 62 +Y ++EL L + A N+AS T K QLANGA+Y D + E HD K+ ALE I Sbjct: 255 RYEDLKQELILQLPDGEVTAANAASLTGKLSQLANGAIYADTGEV-IEFHDRKLDALEDI 313 Query: 63 IEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHG 122 IE AN P++VAY F DL+R++ F R + K I +WN GKIP+ HPAS GHG Sbjct: 314 IEAANEKPLLVAYWFRHDLSRIKNRF-NVREI-KTSRDIADWNAGKIPVAVIHPASAGHG 371 Query: 123 LNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQ 182 LNLQ GG+ LV+F L W LE +QQ R+ RQ V + ++I + TIDE +++ Sbjct: 372 LNLQAGGSTLVWFGLTWSLELYQQTNARL----WRQGQESGTVVIQHIITKGTIDERIVK 427 Query: 183 RLRTKSTIQDLLLNALKKE 201 L K Q L++A+K + Sbjct: 428 ALSKKEMTQTALIDAVKAD 446 >gi|325684273|gb|EGD26446.1| SNF2 domain protein [Lactobacillus delbrueckii subsp. lactis DSM 20072] Length = 633 Score = 143 bits (360), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 79/203 (38%), Positives = 122/203 (60%), Gaps = 10/203 (4%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEV 61 K Y + +++ DL G+ I A N+A + QLA+GA+Y ++ +H++E+ DEKI+ Sbjct: 434 KSYQQLKKDQVLDLPGQEISAENAAVLAGRLRQLASGAIYEEDGEHYQEIFDEKIECC-F 492 Query: 62 IIEKANAAPIIVAYHFNSDLARL----QKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPA 117 + A P +VAY+F SD +RL +K + D P I+ WN+GKIP++ PA Sbjct: 493 YLTSNTATPSLVAYYFKSDASRLLAFYRKNGVKAELFDGSPGMIRRWNKGKIPVMLVQPA 552 Query: 118 SCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 S G GLNLQ GG+ L++F+L W LE++QQM R+ RQ G K+ V +++L+ + TID Sbjct: 553 SAGAGLNLQEGGHTLIWFTLPWSLEQYQQMNGRL--YRQ---GQKKPVIIHHLLTKGTID 607 Query: 178 ELVLQRLRTKSTIQDLLLNALKK 200 VL L+ K Q LL A+++ Sbjct: 608 RHVLDSLKKKDLSQQALLAAVRR 630 >gi|313895516|ref|ZP_07829072.1| SNF2 family N-terminal domain protein [Selenomonas sp. oral taxon 137 str. F0430] gi|312975642|gb|EFR41101.1| SNF2 family N-terminal domain protein [Selenomonas sp. oral taxon 137 str. F0430] Length = 454 Score = 143 bits (360), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 79/196 (40%), Positives = 118/196 (60%), Gaps = 8/196 (4%) Query: 4 YHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVII 63 Y + ++++ L G I+A ++A+ + K LQ+ANGAVY + K +HD K+ ALE ++ Sbjct: 256 YDRMKQDMVVALGGTEIDAVSAAALSGKLLQMANGAVYTENGKS-VHLHDRKLDALEDLV 314 Query: 64 EKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGL 123 E AN P++VAY + DL R+++ P + I+ WN KI + HPAS GHGL Sbjct: 315 ESANGKPVLVAYWYRHDLERIKERLPVQEI--RSSADIENWNAEKISVAVIHPASAGHGL 372 Query: 124 NLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQR 183 NLQ+GG+ L++F L W LE +QQ RI RQ Q G V ++++I TIDE V+Q Sbjct: 373 NLQFGGSTLIWFGLTWSLELYQQTNARI--YRQGQKG---TVVIHHIITVGTIDENVMQA 427 Query: 184 LRTKSTIQDLLLNALK 199 L K+ Q L++A+K Sbjct: 428 LGRKNKTQTALIDAVK 443 >gi|315654958|ref|ZP_07907863.1| SNF2 domain protein [Mobiluncus curtisii ATCC 51333] gi|315490919|gb|EFU80539.1| SNF2 domain protein [Mobiluncus curtisii ATCC 51333] Length = 452 Score = 143 bits (360), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 84/205 (40%), Positives = 122/205 (59%), Gaps = 11/205 (5%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEV 61 K Y + E+ +L E I+A N+A K QLA+GA+Y E VH K+ ALE Sbjct: 254 KVYDRLAAEMVVELGDEVIDAVNAAVLAGKLTQLASGAIY-TEAGDSIVVHGRKLDALED 312 Query: 62 IIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGH 121 +IE AN P++VAY + DLAR+++ FPQ L K I+ WN+G+IP+ HPAS GH Sbjct: 313 LIEAANGNPVLVAYWWQHDLARIRERFPQASQL-KTSADIEAWNDGEIPIGLIHPASAGH 371 Query: 122 GLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVL 181 GLNLQ G +IL+++SL W LE +QQ R+ RQ G + V + ++ +++ID+ +L Sbjct: 372 GLNLQQGSSILIWYSLTWSLELYQQTNARL----YRQ-GQTKPVTITHIATKDSIDQRIL 426 Query: 182 QRLRTKSTIQDLLLNA----LKKET 202 L +K+ Q L++A LK ET Sbjct: 427 SALESKNMTQSALIDAVAQTLKGET 451 >gi|293401139|ref|ZP_06645283.1| SNF2 domain protein [Erysipelotrichaceae bacterium 5_2_54FAA] gi|291305265|gb|EFE46510.1| SNF2 domain protein [Erysipelotrichaceae bacterium 5_2_54FAA] Length = 447 Score = 143 bits (360), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 84/184 (45%), Positives = 111/184 (60%), Gaps = 8/184 (4%) Query: 16 QGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAY 75 +GE I A N+AS T K QLANGA+Y D+E + E HD K+ ALE IIE AN P++VAY Sbjct: 269 EGE-ITAANAASLTGKLSQLANGAIY-DDESNIVEFHDRKLDALEDIIESANGKPLLVAY 326 Query: 76 HFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFF 135 F DL R++K F K I +WN G IP+ HPAS GHGLNLQ GG+ L++F Sbjct: 327 WFKHDLQRIKKHFDVREI--KTSKDIIDWNNGDIPVAVIHPASAGHGLNLQAGGSTLIWF 384 Query: 136 SLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 L W LE +QQ R+ RQ V + ++I + TIDE +L+ L K Q+ L+ Sbjct: 385 GLTWSLELYQQTNARL----WRQGQSSGTVVIEHIITKGTIDERILKALSLKEVSQNALI 440 Query: 196 NALK 199 +A+K Sbjct: 441 DAVK 444 >gi|303239099|ref|ZP_07325629.1| SNF2-related protein [Acetivibrio cellulolyticus CD2] gi|302593437|gb|EFL63155.1| SNF2-related protein [Acetivibrio cellulolyticus CD2] Length = 452 Score = 142 bits (359), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 81/196 (41%), Positives = 115/196 (58%), Gaps = 8/196 (4%) Query: 4 YHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVII 63 Y K +RE +++A N+A K LQ++NGAVY DE + +H K++ LE +I Sbjct: 256 YRKLEREALLPFVDGDVDAVNAAVLAGKLLQMSNGAVY-DENGGVRSIHRRKLEMLEDLI 314 Query: 64 EKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGL 123 E AN P++V Y + D R+ KAF + R +D P I +WN+G+I + AHPAS GHGL Sbjct: 315 ESANGKPVLVYYAYKHDRERILKAF-KARDIDT-PKDISDWNDGRIGIAIAHPASAGHGL 372 Query: 124 NLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQR 183 NLQ GG+ +++F L W LE +QQ RI RQ G V V ++I T+DE V+ Sbjct: 373 NLQAGGSTIIWFGLTWSLELYQQANGRI----HRQ-GQTETVIVNHIITAGTMDEQVMAA 427 Query: 184 LRTKSTIQDLLLNALK 199 L K T Q L+NA++ Sbjct: 428 LNRKETGQTALINAVR 443 >gi|238018846|ref|ZP_04599272.1| hypothetical protein VEIDISOL_00706 [Veillonella dispar ATCC 17748] gi|237864612|gb|EEP65902.1| hypothetical protein VEIDISOL_00706 [Veillonella dispar ATCC 17748] Length = 428 Score = 142 bits (357), Expect = 4e-32, Method: Compositional matrix adjust. Identities = 79/197 (40%), Positives = 122/197 (61%), Gaps = 8/197 (4%) Query: 4 YHKFQRELYCDLQGEN-IEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVI 62 Y + +RE L ++ + A N+A+ K LQLANG++Y D+ VH+EKI+ L+ + Sbjct: 231 YKQMEREHVLSLASDDDVSALNAAALAGKLLQLANGSIYNDD-GEIVVVHNEKIERLKEL 289 Query: 63 IEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHG 122 +E P++V Y+F DL +++AFP+ L D + +WN+G I +L AHPAS G+G Sbjct: 290 VETNEGKPMLVFYNFKHDLQSIKEAFPKAVELKTDD-DVAKWNKGNIQMLLAHPASAGYG 348 Query: 123 LNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQ 182 LNLQ GGNI+V++ L W LE++QQ R+ RQ G + V +++L+ + T+DE V++ Sbjct: 349 LNLQAGGNIIVWYGLTWSLEQYQQANARL----HRQ-GQTQPVIIHHLVTKGTMDEQVMK 403 Query: 183 RLRTKSTIQDLLLNALK 199 L K QD LL A+K Sbjct: 404 ALERKEAGQDALLEAIK 420 >gi|104773892|ref|YP_618872.1| hypothetical protein Ldb0824 [Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842] gi|103422973|emb|CAI97646.1| Hypothetical protein Ldb0824 [Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842] Length = 638 Score = 141 bits (356), Expect = 5e-32, Method: Compositional matrix adjust. Identities = 78/203 (38%), Positives = 122/203 (60%), Gaps = 10/203 (4%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEV 61 K Y + +++ DL G+ I A N+A + QLA+GA+Y ++ +H++E+ EKI++ Sbjct: 439 KSYQQLKKDQVLDLPGQEISAENAAVLAGRLRQLASGAIYEEDGEHYQEIFAEKIESC-F 497 Query: 62 IIEKANAAPIIVAYHFNSDLARL----QKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPA 117 + A P +VAY+F SD +RL +K + D P I+ WN+GKIP++ PA Sbjct: 498 YLTSNTATPSLVAYYFKSDASRLLAFYRKNGVKAELFDSSPGMIRRWNKGKIPVMLVQPA 557 Query: 118 SCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 S G GLNLQ GG+ L++F+L W LE++QQM R+ RQ Q K+ V +++L+ + TID Sbjct: 558 SAGAGLNLQEGGHTLIWFTLPWSLEQYQQMNGRL--YRQGQ---KKPVIIHHLLTKGTID 612 Query: 178 ELVLQRLRTKSTIQDLLLNALKK 200 VL L+ K Q LL A+++ Sbjct: 613 RHVLDSLKKKDLSQQALLAAVRR 635 >gi|300812688|ref|ZP_07093097.1| SNF2 family N-terminal domain protein [Lactobacillus delbrueckii subsp. bulgaricus PB2003/044-T3-4] gi|300496315|gb|EFK31428.1| SNF2 family N-terminal domain protein [Lactobacillus delbrueckii subsp. bulgaricus PB2003/044-T3-4] Length = 636 Score = 141 bits (355), Expect = 6e-32, Method: Compositional matrix adjust. Identities = 78/203 (38%), Positives = 122/203 (60%), Gaps = 10/203 (4%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEV 61 K Y + +++ DL G+ I A N+A + QLA+GA+Y ++ +H++E+ EKI++ Sbjct: 437 KSYQQLKKDQVLDLPGQEISADNAAVLAGRLRQLASGAIYEEDGEHYQEIFAEKIESC-F 495 Query: 62 IIEKANAAPIIVAYHFNSDLARL----QKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPA 117 + A P +VAY+F SD +RL +K + D P I+ WN+GKIP++ PA Sbjct: 496 YLTSNTATPSLVAYYFKSDASRLLAFYRKNGVKAELFDGSPGMIRRWNKGKIPVMLVQPA 555 Query: 118 SCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 S G GLNLQ GG+ L++F+L W LE++QQM R+ RQ Q K+ V +++L+ + TID Sbjct: 556 SAGAGLNLQEGGHTLIWFTLPWSLEQYQQMNGRL--YRQGQ---KKPVIIHHLLTKGTID 610 Query: 178 ELVLQRLRTKSTIQDLLLNALKK 200 VL L+ K Q LL A+++ Sbjct: 611 RHVLDSLKKKDLSQQALLAAVRR 633 >gi|116513899|ref|YP_812805.1| SNF2 family DNA/RNA helicase [Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365] gi|116093214|gb|ABJ58367.1| Superfamily II DNA/RNA helicase, SNF2 family [Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365] gi|325125562|gb|ADY84892.1| SNF2 domain protein [Lactobacillus delbrueckii subsp. bulgaricus 2038] Length = 638 Score = 141 bits (355), Expect = 6e-32, Method: Compositional matrix adjust. Identities = 78/203 (38%), Positives = 122/203 (60%), Gaps = 10/203 (4%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEV 61 K Y + +++ DL G+ I A N+A + QLA+GA+Y ++ +H++E+ EKI++ Sbjct: 439 KSYQQLKKDQVLDLPGQEISAENAAVLAGRLRQLASGAIYEEDGEHYQEIFAEKIESC-F 497 Query: 62 IIEKANAAPIIVAYHFNSDLARL----QKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPA 117 + A P +VAY+F SD +RL +K + D P I+ WN+GKIP++ PA Sbjct: 498 YLTSNTATPSLVAYYFKSDASRLLAFYRKNGVKAELFDGSPGMIRRWNKGKIPVMLVQPA 557 Query: 118 SCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 S G GLNLQ GG+ L++F+L W LE++QQM R+ RQ Q K+ V +++L+ + TID Sbjct: 558 SAGAGLNLQEGGHTLIWFTLPWSLEQYQQMNGRL--YRQGQ---KKPVIIHHLLTKGTID 612 Query: 178 ELVLQRLRTKSTIQDLLLNALKK 200 VL L+ K Q LL A+++ Sbjct: 613 RHVLDSLKKKDLSQQALLAAVRR 635 >gi|313896513|ref|ZP_07830064.1| SNF2 family N-terminal domain protein [Selenomonas sp. oral taxon 137 str. F0430] gi|312974937|gb|EFR40401.1| SNF2 family N-terminal domain protein [Selenomonas sp. oral taxon 137 str. F0430] Length = 447 Score = 140 bits (354), Expect = 7e-32, Method: Compositional matrix adjust. Identities = 80/200 (40%), Positives = 114/200 (57%), Gaps = 7/200 (3%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEV 61 K Y + +L ++G+ + A N+ + K Q+ANGAVY D+ +HD K+ ALE Sbjct: 252 KIYTEMCDQLVLQMKGDEVTAANAGVLSGKLAQMANGAVYTDDGTTL-HIHDRKLDALED 310 Query: 62 IIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGH 121 +E N P++VAY F D R++K R LD D I WN G+I + HPAS GH Sbjct: 311 FVESMNGKPLLVAYWFRHDAERIEKRVTCVR-LDTDDA-IARWNRGEISVALIHPASAGH 368 Query: 122 GLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVL 181 GLNLQ GG+ LV+F + W LE +QQ + R+ RQ + V V ++IA+ TIDE +L Sbjct: 369 GLNLQSGGSTLVWFGITWSLELYQQTVARL----YRQGQTAKTVVVQHIIAEGTIDERIL 424 Query: 182 QRLRTKSTIQDLLLNALKKE 201 + L+ K Q L+ A+K E Sbjct: 425 RALKRKDKTQAALIEAVKAE 444 >gi|319757800|gb|ADV69742.1| phage related DNA helicase [Streptococcus suis JS14] Length = 458 Score = 140 bits (354), Expect = 7e-32, Method: Compositional matrix adjust. Identities = 83/205 (40%), Positives = 123/205 (60%), Gaps = 11/205 (5%) Query: 3 QYHKFQRE-LYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEV 61 +Y +F++E + +L G + A N+AS T K +QL+NGAVY D+ +H++K+ ALE Sbjct: 255 KYSQFKKEYVMSELDGLEVTAANAASLTNKLVQLSNGAVYSDDHTV-VALHEQKLDALED 313 Query: 62 IIEKANAAPIIVAYHFNSDLARL----QKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPA 117 I+E AN P++VAY F DLAR+ +K + R L K I+EWN+G +P+ HPA Sbjct: 314 ILESANGEPVLVAYWFKHDLARIINRIEKLRVKSRVL-KTEEDIREWNKGNVPVGLLHPA 372 Query: 118 SCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 GHGLNLQ GG+ LV+F L W LE +QQ R+ RQ V + +++ + TID Sbjct: 373 GAGHGLNLQKGGHNLVWFGLTWSLELYQQTNARL----WRQGQESETVVIQHIVTEGTID 428 Query: 178 ELVLQRLRTKSTIQDLLLNALKKET 202 E +L+ L K Q+ L+ A+K + Sbjct: 429 EEILKALENKDAQQERLIEAVKAQV 453 >gi|77412062|ref|ZP_00788388.1| SNF2 domain protein [Streptococcus agalactiae CJB111] gi|77161867|gb|EAO72852.1| SNF2 domain protein [Streptococcus agalactiae CJB111] Length = 458 Score = 140 bits (354), Expect = 9e-32, Method: Compositional matrix adjust. Identities = 82/203 (40%), Positives = 124/203 (61%), Gaps = 9/203 (4%) Query: 4 YHKFQRE-LYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVI 62 Y +F+++ + DL+ + A N+AS + K LQ+ANGAVY ++ + +HD+K+ ALE I Sbjct: 256 YKQFKKDYVLADLENGEVTAANAASLSNKLLQMANGAVYSNDHQV-VSLHDQKLDALEDI 314 Query: 63 IEKANAAPIIVAYHFNSDLARLQKAFPQGR---TLDKDPCTIQEWNEGKIPLLFAHPASC 119 IE AN P++VAY F D+ R+++ + + T+ K I+EWN+GKI + HPAS Sbjct: 315 IEAANGEPVLVAYWFKHDVQRIEERLVKLKVKGTILKTEEDIREWNKGKISVGLLHPASA 374 Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 GHGLNLQ GG+ LV+F L W LE +QQ R+ RQ V + +++ Q TIDE Sbjct: 375 GHGLNLQKGGHHLVWFGLIWSLELYQQTNARL----WRQGQQADTVVIQHIVTQGTIDEE 430 Query: 180 VLQRLRTKSTIQDLLLNALKKET 202 +L+ L +K Q L+ A+K + Sbjct: 431 ILKALESKDAQQSRLIEAVKAQV 453 >gi|313123514|ref|YP_004033773.1| superfamily ii DNA/RNA helicase, snf2 family [Lactobacillus delbrueckii subsp. bulgaricus ND02] gi|312280077|gb|ADQ60796.1| Superfamily II DNA/RNA helicase, SNF2 family [Lactobacillus delbrueckii subsp. bulgaricus ND02] Length = 626 Score = 140 bits (352), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 77/203 (37%), Positives = 122/203 (60%), Gaps = 10/203 (4%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEV 61 K Y + +++ DL G+ + A N+A + QLA+GA+Y ++ +H++E+ EKI++ Sbjct: 427 KSYQQLKKDQVLDLPGQELSADNAAVLAGRLRQLASGAIYEEDGEHYQEIFAEKIESC-F 485 Query: 62 IIEKANAAPIIVAYHFNSDLARL----QKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPA 117 + A P +VAY+F SD +RL +K + D P I+ WN+GKIP++ PA Sbjct: 486 YLTSNTATPSLVAYYFKSDASRLLAFYRKNGVKAELFDGSPGMIRRWNKGKIPVMLVQPA 545 Query: 118 SCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 S G GLNLQ GG+ L++F+L W LE++QQM R+ RQ Q K+ V +++L+ + TID Sbjct: 546 SAGAGLNLQEGGHTLIWFTLPWSLEQYQQMNGRL--YRQGQ---KKPVIIHHLLTKGTID 600 Query: 178 ELVLQRLRTKSTIQDLLLNALKK 200 VL L+ K Q LL A+++ Sbjct: 601 RHVLDSLKKKDLSQQALLAAVRR 623 >gi|225573262|ref|ZP_03782017.1| hypothetical protein RUMHYD_01453 [Blautia hydrogenotrophica DSM 10507] gi|225039394|gb|EEG49640.1| hypothetical protein RUMHYD_01453 [Blautia hydrogenotrophica DSM 10507] Length = 454 Score = 139 bits (350), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 83/205 (40%), Positives = 116/205 (56%), Gaps = 12/205 (5%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEV 61 ++Y F+R+L L I A N+A+ + K Q+ANGAVY DE + +HD K+ ALE Sbjct: 254 QRYVSFKRDLLLQLPDGEITAANAAALSGKLSQMANGAVYTDEGET-IAIHDRKLDALED 312 Query: 62 IIEKANAAPIIVAYHFNSDLARLQKAF-----PQGRTLDKDPCTIQEWNEGKIPLLFAHP 116 IIE P++VAY F DL R+ P R LD +I+ WN G++P+ HP Sbjct: 313 IIESMGGKPLLVAYWFRHDLERITGRLHKLKIPFSR-LDSSK-SIRRWNSGELPVALIHP 370 Query: 117 ASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTI 176 AS GHGLNLQ GG+ LV+F L W LE +QQ R+ RQ V + ++I + TI Sbjct: 371 ASAGHGLNLQSGGSTLVWFGLTWSLELYQQTNARL----WRQGQQSDIVVIQHIITKGTI 426 Query: 177 DELVLQRLRTKSTIQDLLLNALKKE 201 DE +++ L K T Q L+ A+K + Sbjct: 427 DERIMKALSEKDTTQAALIEAVKAD 451 >gi|331090252|ref|ZP_08339139.1| hypothetical protein HMPREF1025_02722 [Lachnospiraceae bacterium 3_1_46FAA] gi|330401871|gb|EGG81446.1| hypothetical protein HMPREF1025_02722 [Lachnospiraceae bacterium 3_1_46FAA] Length = 453 Score = 139 bits (350), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 76/198 (38%), Positives = 120/198 (60%), Gaps = 8/198 (4%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEV 61 K Y + ++++ + +++A N+A+ + K LQ+ANGAVY DE + +HD+K+ ALE Sbjct: 250 KLYRQKEKDMLLPFEDGDVDAVNAAALSGKLLQMANGAVY-DENHKVRHIHDKKLDALED 308 Query: 62 IIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGH 121 +IE AN P++VAY + DL R+ + F K I++W EGKIP+ HPAS GH Sbjct: 309 LIEAANGKPVLVAYWYQHDLDRIVERFKAVPL--KAAGDIRKWKEGKIPVAAIHPASAGH 366 Query: 122 GLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVL 181 GLN+Q GG+IL++F L W LE + Q R+ QR+ V +Y++I + T+DE + Sbjct: 367 GLNIQDGGHILIWFGLTWSLELYMQCNARLWRQGQRE-----TVMIYHIINKGTLDEDAM 421 Query: 182 QRLRTKSTIQDLLLNALK 199 + L K Q +++A+K Sbjct: 422 RSLEQKDCGQSAIIDAVK 439 >gi|167757891|ref|ZP_02430018.1| hypothetical protein CLOSCI_00222 [Clostridium scindens ATCC 35704] gi|167664545|gb|EDS08675.1| hypothetical protein CLOSCI_00222 [Clostridium scindens ATCC 35704] Length = 454 Score = 139 bits (349), Expect = 3e-31, Method: Compositional matrix adjust. Identities = 83/206 (40%), Positives = 117/206 (56%), Gaps = 12/206 (5%) Query: 1 MKQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 +++Y F+R+L L I A N+A+ + K Q+ANGAVY D+ + +HD K+ ALE Sbjct: 253 VQRYVSFKRDLLLQLPDGEITAANAAALSGKLSQMANGAVYTDDGET-IAIHDRKLDALE 311 Query: 61 VIIEKANAAPIIVAYHFNSDLARL-----QKAFPQGRTLDKDPCTIQEWNEGKIPLLFAH 115 IIE P++VAY F DL R+ + P R LD +I WN G++P+ H Sbjct: 312 DIIESMGGKPLLVAYWFRHDLERIAGRLHKLKIPFSR-LDSSE-SIHRWNAGELPVALIH 369 Query: 116 PASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNT 175 PAS GHGLNLQ GG+ LV+F L W LE +QQ R+ RQ V V ++I + T Sbjct: 370 PASAGHGLNLQSGGSTLVWFGLTWSLELYQQTNARL----WRQGQQSDTVVVQHIITKGT 425 Query: 176 IDELVLQRLRTKSTIQDLLLNALKKE 201 IDE +++ L K T Q L+ A+K + Sbjct: 426 IDERIMKALSEKDTTQAALIEAVKAD 451 >gi|260161780|emb|CAZ39324.1| phage related DNA helicase [Streptococcus suis] gi|313575362|emb|CBR26891.1| hypothetical protein [Streptococcus phage phi-SsUD.1] Length = 458 Score = 139 bits (349), Expect = 3e-31, Method: Compositional matrix adjust. Identities = 84/205 (40%), Positives = 124/205 (60%), Gaps = 11/205 (5%) Query: 2 KQYHKFQRE-LYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 ++Y +F++E + +L G + A N+AS T K +QL+NGAVY D+ +H++K+ ALE Sbjct: 254 EKYIQFKKEYVLSELDGLEVTAANAASLTNKLVQLSNGAVYSDDHTV-VSLHEQKLDALE 312 Query: 61 VIIEKANAAPIIVAYHFNSDLAR----LQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHP 116 I+E AN PI+VAY F DLAR L+K + + L K I+EWN+G +P+ HP Sbjct: 313 DILESANGEPILVAYWFKHDLARIMSRLEKLKLKSQVL-KTEEDIREWNKGNVPVGLLHP 371 Query: 117 ASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTI 176 A GHGLNLQ GG+ LV+F L W LE +QQ R+ RQ V + +++ + TI Sbjct: 372 AGAGHGLNLQKGGHHLVWFGLTWSLELYQQTNARL----WRQGQESETVVIQHIVTEGTI 427 Query: 177 DELVLQRLRTKSTIQDLLLNALKKE 201 DE +L+ L K Q+ L+ A+K + Sbjct: 428 DEEILKALENKDAQQERLIAAVKAQ 452 >gi|76788487|ref|YP_329361.1| prophage LambdaSa04, SNF2 family helicase [Streptococcus agalactiae A909] gi|76563544|gb|ABA46128.1| prophage LambdaSa04, helicase, SNF2 family [Streptococcus agalactiae A909] Length = 458 Score = 139 bits (349), Expect = 3e-31, Method: Compositional matrix adjust. Identities = 81/203 (39%), Positives = 123/203 (60%), Gaps = 9/203 (4%) Query: 4 YHKFQRE-LYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVI 62 Y +F+++ + DL+ + A N+AS + K +Q+ANGAVY D+++ +HD+K+ ALE I Sbjct: 256 YSQFKKDYIMADLEDTEVTAANAASLSNKLVQMANGAVYSDDQQV-VSLHDQKLDALEDI 314 Query: 63 IEKANAAPIIVAYHFNSDLARLQKAFPQGR---TLDKDPCTIQEWNEGKIPLLFAHPASC 119 IE AN P++VAY F DL R+++ + + T+ K I+EWN+G + + HPAS Sbjct: 315 IEAANGEPVLVAYWFKHDLKRIEERLAKLKVKGTVLKTEEDIREWNKGNVSVGLLHPASS 374 Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 GHGLNLQ GG+ LV+F L W LE +QQ R+ RQ V + +++ + TIDE Sbjct: 375 GHGLNLQKGGHHLVWFGLTWSLELYQQTNARL----WRQGQQAETVVIQHIVTECTIDEE 430 Query: 180 VLQRLRTKSTIQDLLLNALKKET 202 +L+ L K Q LL A+K + Sbjct: 431 ILKVLENKDAQQARLLEAVKAQV 453 >gi|253581729|ref|ZP_04858953.1| SNF2 domain-containing protein [Fusobacterium varium ATCC 27725] gi|251836078|gb|EES64615.1| SNF2 domain-containing protein [Fusobacterium varium ATCC 27725] Length = 459 Score = 138 bits (348), Expect = 4e-31, Method: Compositional matrix adjust. Identities = 81/202 (40%), Positives = 128/202 (63%), Gaps = 9/202 (4%) Query: 1 MKQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 MK+Y + ++++ +L+ + I+ ++A+ + K +QLANGA+Y DE + EVH+ KI+A Sbjct: 255 MKEYEELEKKMILELEDKTIDVTSAAALSNKLMQLANGAIY-DENRGIHEVHNCKIEAFM 313 Query: 61 VIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQE---WNEGKIPLLFAHPA 117 +IEK N +V Y+F DLARLQ+A + + T+++ WN+ +I +L HPA Sbjct: 314 ELIEKLNGKAALVFYNFQHDLARLQEALKKTGLKVRILKTVEDQDAWNKKEIDILLTHPA 373 Query: 118 SCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 S +GLNLQ GGN +++F L W LE +QQ +R+ RQ G K V V++L+ Q+T D Sbjct: 374 SSAYGLNLQEGGNHVIWFGLNWSLELYQQANKRL----HRQ-GQKEKVIVHHLVVQDTRD 428 Query: 178 ELVLQRLRTKSTIQDLLLNALK 199 E V++ L TK +Q+ LL +LK Sbjct: 429 EDVIKALNTKGDVQEALLESLK 450 >gi|293400001|ref|ZP_06644147.1| SNF2 domain protein [Erysipelotrichaceae bacterium 5_2_54FAA] gi|291306401|gb|EFE47644.1| SNF2 domain protein [Erysipelotrichaceae bacterium 5_2_54FAA] Length = 446 Score = 138 bits (347), Expect = 5e-31, Method: Compositional matrix adjust. Identities = 85/206 (41%), Positives = 125/206 (60%), Gaps = 15/206 (7%) Query: 1 MKQYHKFQRELYCDLQGEN-IEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKAL 59 M YH+F+RE + + I A N+ T K LQ GAVY DE +E+HD K+KAL Sbjct: 250 MVAYHRFKREKILQICEDGVITAANAGVVTNKLLQFTAGAVY-DENHEVQELHDTKLKAL 308 Query: 60 EVIIEKANAAPIIVAYHFNSDLARLQKAFP--QGRTLDKDPC--TIQEWNEGKIPLLFAH 115 E ++E AN P++V Y+F D R+ FP + R ++ C +++WN+GKI +L H Sbjct: 309 EDLLEAANGNPVMVFYYFKHDRDRIIDHFPDVEIRAIE---CQQDVKDWNDGKIEMLLVH 365 Query: 116 PASCGHGLNLQYGGNILVFFSLW-WDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQN 174 PAS GHGLNLQ GGNI+++++L W+LE + Q R+ RQ G + V +Y+LIA+ Sbjct: 366 PASVGHGLNLQQGGNIIIWYTLPNWNLELYLQANARL----HRQ-GQQNTVMIYHLIAKG 420 Query: 175 TIDELVLQRLRTKSTIQDLLLNALKK 200 T+DE +++ L K Q L+ ALK+ Sbjct: 421 TVDEDMIRSLEQKDISQKTLIEALKR 446 >gi|87160506|ref|YP_494105.1| phage helicase [Staphylococcus aureus subsp. aureus USA300_FPR3757] gi|87126480|gb|ABD20994.1| phage helicase [Staphylococcus aureus subsp. aureus USA300_FPR3757] Length = 423 Score = 138 bits (347), Expect = 5e-31, Method: Compositional matrix adjust. Identities = 79/178 (44%), Positives = 110/178 (61%), Gaps = 7/178 (3%) Query: 22 AFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDL 81 A N AS + K LQL+NGAVY DEE + +HD+K+ LE IIE++ PI++ Y+F D Sbjct: 246 AQNGASLSQKLLQLSNGAVYTDEEDV-RLIHDKKLDKLEEIIEESQGQPILLFYNFKHDK 304 Query: 82 ARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDL 141 R+ + F + TLD D + WN G I LL AHPAS GHGLNLQ GG+I+V+F L W L Sbjct: 305 ERILQRFKEATTLD-DSNYKERWNSGDIKLLIAHPASAGHGLNLQQGGHIIVWFGLTWSL 363 Query: 142 EEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 E +QQ R+ RQ G +++++ NTID+ V + L+ K Q+ L+ A+K Sbjct: 364 ELYQQANARL--YRQ---GQNHTTIIHHIMTDNTIDQRVYKALQNKELTQEELMKAIK 416 >gi|161509685|ref|YP_001575344.1| helicase [Staphylococcus aureus subsp. aureus USA300_TCH1516] gi|294848484|ref|ZP_06789230.1| helicase [Staphylococcus aureus A9754] gi|160368494|gb|ABX29465.1| possible helicase [Staphylococcus aureus subsp. aureus USA300_TCH1516] gi|294824510|gb|EFG40933.1| helicase [Staphylococcus aureus A9754] gi|320140665|gb|EFW32519.1| protein, SNF2 family [Staphylococcus aureus subsp. aureus MRSA131] gi|320142763|gb|EFW34566.1| protein, SNF2 family [Staphylococcus aureus subsp. aureus MRSA177] Length = 455 Score = 138 bits (347), Expect = 5e-31, Method: Compositional matrix adjust. Identities = 79/178 (44%), Positives = 110/178 (61%), Gaps = 7/178 (3%) Query: 22 AFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDL 81 A N AS + K LQL+NGAVY DEE + +HD+K+ LE IIE++ PI++ Y+F D Sbjct: 278 AQNGASLSQKLLQLSNGAVYTDEED-VRLIHDKKLDKLEEIIEESQGQPILLFYNFKHDK 336 Query: 82 ARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDL 141 R+ + F + TLD D + WN G I LL AHPAS GHGLNLQ GG+I+V+F L W L Sbjct: 337 ERILQRFKEATTLD-DSNYKERWNSGDIKLLIAHPASAGHGLNLQQGGHIIVWFGLTWSL 395 Query: 142 EEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 E +QQ R+ RQ G +++++ NTID+ V + L+ K Q+ L+ A+K Sbjct: 396 ELYQQANARL--YRQ---GQNHTTIIHHIMTDNTIDQRVYKALQNKELTQEELMKAIK 448 >gi|315197730|gb|EFU28064.1| possible helicase [Staphylococcus aureus subsp. aureus CGS01] Length = 452 Score = 138 bits (347), Expect = 5e-31, Method: Compositional matrix adjust. Identities = 79/178 (44%), Positives = 110/178 (61%), Gaps = 7/178 (3%) Query: 22 AFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDL 81 A N AS + K LQL+NGAVY DEE + +HD+K+ LE IIE++ PI++ Y+F D Sbjct: 275 AQNGASLSQKLLQLSNGAVYTDEED-VRLIHDKKLDKLEEIIEESQGQPILLFYNFKHDK 333 Query: 82 ARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDL 141 R+ + F + TLD D + WN G I LL AHPAS GHGLNLQ GG+I+V+F L W L Sbjct: 334 ERILQRFKEATTLD-DSNYKERWNSGDIKLLIAHPASAGHGLNLQQGGHIIVWFGLTWSL 392 Query: 142 EEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 E +QQ R+ RQ G +++++ NTID+ V + L+ K Q+ L+ A+K Sbjct: 393 ELYQQANARL--YRQ---GQNHTTIIHHIMTDNTIDQRVYKALQNKELTQEELMKAIK 445 >gi|291556509|emb|CBL33626.1| Superfamily II DNA/RNA helicases, SNF2 family [Eubacterium siraeum V10Sc8a] Length = 454 Score = 137 bits (345), Expect = 9e-31, Method: Compositional matrix adjust. Identities = 79/201 (39%), Positives = 117/201 (58%), Gaps = 12/201 (5%) Query: 4 YHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVII 63 Y + +++ DL I A N+A + K Q+ANGA+Y D+ + +H++K+ ALE II Sbjct: 256 YDEMKKQFILDLPEGEISAANAAVLSGKLSQMANGAIY-DDAGNAVSIHEQKLDALEDII 314 Query: 64 EKANAAPIIVAYHFNSDLARL-----QKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPAS 118 E AN P++VAY + DL R+ ++ P + LDK +I+ WN G+I + HPAS Sbjct: 315 ESANGKPLLVAYWYQHDLERIMERLHERHIPFSK-LDK-ADSIRRWNNGEISVALIHPAS 372 Query: 119 CGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDE 178 GHGLNLQ GGN +V+F L W LE + Q I R+ RQ + V V +++ TIDE Sbjct: 373 AGHGLNLQAGGNTIVWFGLTWSLELYSQTIARL----WRQGQTEETVIVQHIVTDGTIDE 428 Query: 179 LVLQRLRTKSTIQDLLLNALK 199 +L+ L+ K Q L+ A+K Sbjct: 429 QILRALKAKDKTQSALIAAVK 449 >gi|50914495|ref|YP_060467.1| Phage-related DNA helicase [Streptococcus pyogenes MGAS10394] gi|40218555|gb|AAR83209.1| phage helicase [Streptococcus pyogenes] gi|50261600|gb|AAT72368.1| helicase [Streptococcus pyogenes] gi|50903569|gb|AAT87284.1| Phage-related DNA helicase [Streptococcus pyogenes MGAS10394] Length = 458 Score = 137 bits (344), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 83/206 (40%), Positives = 122/206 (59%), Gaps = 11/206 (5%) Query: 2 KQYHKFQRE-LYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 ++Y +F++E + +L G + A N+AS K +QL+NGAVY D+ +H++K+ ALE Sbjct: 254 EKYIQFKKEYVLSELDGLEVTAANAASLMNKLVQLSNGAVYSDDHTV-VPLHEQKLDALE 312 Query: 61 VIIEKANAAPIIVAYHFNSDLAR----LQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHP 116 I+E AN P++VAY F DLAR L+K R L K I+EWN+G +P+ HP Sbjct: 313 DILESANGEPVLVAYWFKHDLARITGRLEKLKVTSRVL-KTEEDIREWNKGNVPVGLIHP 371 Query: 117 ASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTI 176 A GHGLNLQ GG+ LV+F L W LE +QQ R+ RQ V + +++ + TI Sbjct: 372 AGAGHGLNLQKGGHHLVWFGLTWSLELYQQTNARL----WRQGQEAETVVIQHIVTEGTI 427 Query: 177 DELVLQRLRTKSTIQDLLLNALKKET 202 DE +L+ L K Q+ L+ A+K + Sbjct: 428 DEEILKALGNKDAQQERLIEAVKAQV 453 >gi|284024515|ref|ZP_06378913.1| SNF2-related protein [Staphylococcus aureus subsp. aureus 132] Length = 452 Score = 136 bits (343), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 78/178 (43%), Positives = 110/178 (61%), Gaps = 7/178 (3%) Query: 22 AFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDL 81 A N AS + K LQL+NGAVY DEE + +HD+K+ LE IIE++ PI++ Y+F D Sbjct: 275 AQNGASLSQKLLQLSNGAVYTDEED-VRLIHDKKLDKLEEIIEESQGQPILLFYNFKHDK 333 Query: 82 ARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDL 141 R+ + F + TL+ D + WN G I LL AHPAS GHGLNLQ GG+I+V+F L W L Sbjct: 334 ERILQRFKEATTLE-DSNYKERWNSGDIKLLIAHPASAGHGLNLQQGGHIIVWFGLTWSL 392 Query: 142 EEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 E +QQ R+ RQ G +++++ NTID+ V + L+ K Q+ L+ A+K Sbjct: 393 ELYQQANARL--YRQ---GQNHTTIIHHIMTDNTIDQRVYKALQNKELTQEELMKAIK 445 >gi|298693629|gb|ADI96851.1| putative DNA helicase [Staphylococcus aureus subsp. aureus ED133] Length = 455 Score = 136 bits (342), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 81/199 (40%), Positives = 119/199 (59%), Gaps = 8/199 (4%) Query: 2 KQYHKFQRELYCDLQGE-NIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 K Y K ++ + + E + A N AS + K LQL+NGAVY D+E + +HD+K+ LE Sbjct: 257 KVYEKLEKNYILESEEEGTVVAQNGASLSQKLLQLSNGAVYTDDED-VRLIHDKKLDKLE 315 Query: 61 VIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCG 120 IIE++ PI++ Y+F D R+ + F + TL+ D + WN G I LL AHPAS G Sbjct: 316 EIIEESQGQPILLFYNFKHDKERILQRFKEATTLE-DSNYKERWNSGDIKLLIAHPASAG 374 Query: 121 HGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELV 180 HGLNLQ GG+I+V+F L W LE +QQ R+ RQ G +++++ NTID+ V Sbjct: 375 HGLNLQQGGHIIVWFGLTWSLELYQQANARL--YRQ---GQNHTTIIHHIMTDNTIDQRV 429 Query: 181 LQRLRTKSTIQDLLLNALK 199 + L+ K Q+ L+ A+K Sbjct: 430 YKALQNKELTQEELMKAIK 448 >gi|49485834|ref|YP_043055.1| hypothetical protein SAS0928 [Staphylococcus aureus subsp. aureus MSSA476] gi|49244277|emb|CAG42704.1| hypothetical phage protein [Staphylococcus aureus subsp. aureus MSSA476] Length = 455 Score = 136 bits (342), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 78/178 (43%), Positives = 110/178 (61%), Gaps = 7/178 (3%) Query: 22 AFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDL 81 A N AS + K LQL+NGAVY DEE + +HD+K+ LE IIE++ PI++ Y+F D Sbjct: 275 AQNGASLSQKLLQLSNGAVYTDEE-DVRLIHDKKLDKLEEIIEESQGQPILLFYNFKHDK 333 Query: 82 ARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDL 141 R+ + F + TL+ D + WN G I LL AHPAS GHGLNLQ GG+I+V+F L W L Sbjct: 334 ERILQRFKEATTLE-DSNYKERWNSGDIKLLIAHPASAGHGLNLQQGGHIIVWFGLTWSL 392 Query: 142 EEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 E +QQ R+ RQ G +++++ NTID+ V + L+ K Q+ L+ A+K Sbjct: 393 ELYQQANARL--YRQ---GQNHTTIIHHIMTDNTIDQRVYKALQNKELTQEELMKAIK 445 >gi|258420304|ref|ZP_05683251.1| helicase [Staphylococcus aureus A9719] gi|258448843|ref|ZP_05696953.1| phage helicase [Staphylococcus aureus A6224] gi|257843729|gb|EEV68131.1| helicase [Staphylococcus aureus A9719] gi|257857880|gb|EEV80771.1| phage helicase [Staphylococcus aureus A6224] gi|329730625|gb|EGG67010.1| SNF2 family N-terminal domain protein [Staphylococcus aureus subsp. aureus 21193] Length = 452 Score = 136 bits (342), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 78/178 (43%), Positives = 110/178 (61%), Gaps = 7/178 (3%) Query: 22 AFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDL 81 A N AS + K LQL+NGAVY DEE + +HD+K+ LE IIE++ PI++ Y+F D Sbjct: 275 AQNGASLSQKLLQLSNGAVYTDEED-VRLIHDKKLDKLEEIIEESQGQPILLFYNFKHDK 333 Query: 82 ARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDL 141 R+ + F + TL+ D + WN G I LL AHPAS GHGLNLQ GG+I+V+F L W L Sbjct: 334 ERILQRFKEATTLE-DSNYKERWNSGDIKLLIAHPASAGHGLNLQQGGHIIVWFGLTWSL 392 Query: 142 EEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 E +QQ R+ RQ G +++++ NTID+ V + L+ K Q+ L+ A+K Sbjct: 393 ELYQQANARL--YRQ---GQNHTTIIHHIMTDNTIDQRVYKALQNKELTQEELMKAIK 445 >gi|302333125|gb|ADL23318.1| SNF2 family N-terminal domain protein [Staphylococcus aureus subsp. aureus JKD6159] Length = 452 Score = 136 bits (342), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 78/178 (43%), Positives = 110/178 (61%), Gaps = 7/178 (3%) Query: 22 AFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDL 81 A N AS + K LQL+NGAVY DEE + +HD+K+ LE IIE++ PI++ Y+F D Sbjct: 275 AQNGASLSQKLLQLSNGAVYTDEED-VRLIHDKKLDKLEEIIEESQGQPILLFYNFKHDK 333 Query: 82 ARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDL 141 R+ + F + TL+ D + WN G I LL AHPAS GHGLNLQ GG+I+V+F L W L Sbjct: 334 ERILQRFKEATTLE-DSNYKERWNSGDIKLLIAHPASAGHGLNLQQGGHIIVWFGLTWSL 392 Query: 142 EEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 E +QQ R+ RQ G +++++ NTID+ V + L+ K Q+ L+ A+K Sbjct: 393 ELYQQANARL--YRQ---GQNHTTIIHHIMTDNTIDQRVYKALQNKELTQEELMKAIK 445 >gi|209363583|ref|YP_002268001.1| phage helicase [Staphylococcus phage phi2958PVL] gi|208973084|dbj|BAG74400.1| phage helicase [Staphylococcus phage phi2958PVL] Length = 423 Score = 136 bits (342), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 78/178 (43%), Positives = 110/178 (61%), Gaps = 7/178 (3%) Query: 22 AFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDL 81 A N AS + K LQL+NGAVY DEE + +HD+K+ LE IIE++ PI++ Y+F D Sbjct: 246 AQNGASLSQKLLQLSNGAVYTDEEDV-RLIHDKKLDKLEEIIEESQGQPILLFYNFKHDK 304 Query: 82 ARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDL 141 R+ + F + TL+ D + WN G I LL AHPAS GHGLNLQ GG+I+V+F L W L Sbjct: 305 ERILQRFKEATTLE-DSNYKERWNSGDIKLLIAHPASAGHGLNLQQGGHIIVWFGLTWSL 363 Query: 142 EEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 E +QQ R+ RQ G +++++ NTID+ V + L+ K Q+ L+ A+K Sbjct: 364 ELYQQANARL--YRQ---GQNHTTIIHHIMTDNTIDQRVYKALQNKELTQEELMKAIK 416 >gi|21283134|ref|NP_646222.1| hypothetical protein MW1405 [Staphylococcus aureus subsp. aureus MW2] gi|49483700|ref|YP_040924.1| hypothetical protein SAR1523 [Staphylococcus aureus subsp. aureus MRSA252] gi|148267489|ref|YP_001246432.1| SNF2-related protein [Staphylococcus aureus subsp. aureus JH9] gi|150393543|ref|YP_001316218.1| SNF2-related protein [Staphylococcus aureus subsp. aureus JH1] gi|282905864|ref|ZP_06313719.1| hypothetical protein SDAG_01488 [Staphylococcus aureus subsp. aureus Btn1260] gi|282919229|ref|ZP_06326964.1| hypothetical protein SASG_00535 [Staphylococcus aureus subsp. aureus C427] gi|282921765|ref|ZP_06329482.1| conserved hypothetical protein [Staphylococcus aureus A9765] gi|282927343|ref|ZP_06334961.1| conserved hypothetical protein [Staphylococcus aureus A10102] gi|21204574|dbj|BAB95270.1| hypothetical protein [Staphylococcus aureus subsp. aureus MW2] gi|49241829|emb|CAG40521.1| hypothetical phage protein [Staphylococcus aureus subsp. aureus MRSA252] gi|147740558|gb|ABQ48856.1| SNF2-related protein [Staphylococcus aureus subsp. aureus JH9] gi|149945995|gb|ABR51931.1| SNF2-related protein [Staphylococcus aureus subsp. aureus JH1] gi|282317039|gb|EFB47413.1| hypothetical protein SASG_00535 [Staphylococcus aureus subsp. aureus C427] gi|282331156|gb|EFB60670.1| hypothetical protein SDAG_01488 [Staphylococcus aureus subsp. aureus Btn1260] gi|282590667|gb|EFB95743.1| conserved hypothetical protein [Staphylococcus aureus A10102] gi|282594027|gb|EFB99016.1| conserved hypothetical protein [Staphylococcus aureus A9765] gi|283470735|emb|CAQ49946.1| SNF2 family N-domain protein [Staphylococcus aureus subsp. aureus ST398] Length = 452 Score = 136 bits (342), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 78/178 (43%), Positives = 110/178 (61%), Gaps = 7/178 (3%) Query: 22 AFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDL 81 A N AS + K LQL+NGAVY DEE + +HD+K+ LE IIE++ PI++ Y+F D Sbjct: 275 AQNGASLSQKLLQLSNGAVYTDEED-VRLIHDKKLDKLEEIIEESQGQPILLFYNFKHDK 333 Query: 82 ARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDL 141 R+ + F + TL+ D + WN G I LL AHPAS GHGLNLQ GG+I+V+F L W L Sbjct: 334 ERILQRFKEATTLE-DSNYKERWNSGDIKLLIAHPASAGHGLNLQQGGHIIVWFGLTWSL 392 Query: 142 EEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 E +QQ R+ RQ G +++++ NTID+ V + L+ K Q+ L+ A+K Sbjct: 393 ELYQQANARL--YRQ---GQNHTTIIHHIMTDNTIDQRVYKALQNKELTQEELMKAIK 445 >gi|295428024|ref|ZP_06820656.1| helicase [Staphylococcus aureus subsp. aureus EMRSA16] gi|297591005|ref|ZP_06949643.1| SNF2 domain protein [Staphylococcus aureus subsp. aureus MN8] gi|300911909|ref|ZP_07129352.1| SNF2 domain protein [Staphylococcus aureus subsp. aureus TCH70] gi|295128382|gb|EFG58016.1| helicase [Staphylococcus aureus subsp. aureus EMRSA16] gi|297575891|gb|EFH94607.1| SNF2 domain protein [Staphylococcus aureus subsp. aureus MN8] gi|300886155|gb|EFK81357.1| SNF2 domain protein [Staphylococcus aureus subsp. aureus TCH70] Length = 455 Score = 136 bits (342), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 78/178 (43%), Positives = 110/178 (61%), Gaps = 7/178 (3%) Query: 22 AFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDL 81 A N AS + K LQL+NGAVY DEE + +HD+K+ LE IIE++ PI++ Y+F D Sbjct: 278 AQNGASLSQKLLQLSNGAVYTDEED-VRLIHDKKLDKLEEIIEESQGQPILLFYNFKHDK 336 Query: 82 ARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDL 141 R+ + F + TL+ D + WN G I LL AHPAS GHGLNLQ GG+I+V+F L W L Sbjct: 337 ERILQRFKEATTLE-DSNYKERWNSGDIKLLIAHPASAGHGLNLQQGGHIIVWFGLTWSL 395 Query: 142 EEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 E +QQ R+ RQ G +++++ NTID+ V + L+ K Q+ L+ A+K Sbjct: 396 ELYQQANARL--YRQ---GQNHTTIIHHIMTDNTIDQRVYKALQNKELTQEELMKAIK 448 >gi|295407565|ref|ZP_06817358.1| helicase [Staphylococcus aureus A8819] gi|297246595|ref|ZP_06930428.1| helicase [Staphylococcus aureus A8796] gi|294967584|gb|EFG43620.1| helicase [Staphylococcus aureus A8819] gi|297176553|gb|EFH35818.1| helicase [Staphylococcus aureus A8796] Length = 455 Score = 136 bits (342), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 78/178 (43%), Positives = 110/178 (61%), Gaps = 7/178 (3%) Query: 22 AFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDL 81 A N AS + K LQL+NGAVY DEE + +HD+K+ LE IIE++ PI++ Y+F D Sbjct: 278 AQNGASLSQKLLQLSNGAVYTDEED-VRLIHDKKLDKLEEIIEESQGQPILLFYNFKHDK 336 Query: 82 ARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDL 141 R+ + F + TL+ D + WN G I LL AHPAS GHGLNLQ GG+I+V+F L W L Sbjct: 337 ERILQRFKEATTLE-DSNYKERWNSGDIKLLIAHPASAGHGLNLQQGGHIIVWFGLTWSL 395 Query: 142 EEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 E +QQ R+ RQ G +++++ NTID+ V + L+ K Q+ L+ A+K Sbjct: 396 ELYQQANARL--YRQ---GQNHTTIIHHIMTDNTIDQRVYKALQNKELTQEELMKAIK 448 >gi|70726780|ref|YP_253694.1| hypothetical protein SH1779 [Staphylococcus haemolyticus JCSC1435] gi|68447504|dbj|BAE05088.1| unnamed protein product [Staphylococcus haemolyticus JCSC1435] Length = 452 Score = 135 bits (340), Expect = 3e-30, Method: Compositional matrix adjust. Identities = 83/201 (41%), Positives = 117/201 (58%), Gaps = 16/201 (7%) Query: 8 QRELYCDLQ---------GENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKA 58 +R+LY +L+ I A + AS + K LQL+NGAVY D+E + +HD K+ Sbjct: 252 ERKLYDELEKYYILEDETDGTIVAQSGASLSQKILQLSNGAVYTDDED-VRHIHDRKLDK 310 Query: 59 LEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPAS 118 LE II++A PI++ Y+F D R+ + F TLD D +WN GK +L AHPAS Sbjct: 311 LEEIIDEAQGQPILLFYNFKHDRDRILERFDDVLTLD-DKGYKDKWNSGKAKILLAHPAS 369 Query: 119 CGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDE 178 GHGLNLQ GG+I+V+F L W LE +QQ R+ RQ Q +++++ NTID+ Sbjct: 370 AGHGLNLQQGGHIIVWFGLTWSLELYQQANARL--YRQGQT---HTTIIHHIMTDNTIDQ 424 Query: 179 LVLQRLRTKSTIQDLLLNALK 199 V Q L+ K QD L+ A+K Sbjct: 425 RVYQALQNKELTQDELMKAIK 445 >gi|296276324|ref|ZP_06858831.1| SNF2 family protein [Staphylococcus aureus subsp. aureus MR1] Length = 455 Score = 135 bits (340), Expect = 3e-30, Method: Compositional matrix adjust. Identities = 80/201 (39%), Positives = 119/201 (59%), Gaps = 16/201 (7%) Query: 8 QRELYCDLQGE---------NIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKA 58 +R++Y +L+ + A N AS + K LQL+NGAVY D+E + +HD+K+ Sbjct: 252 ERKVYAELEKNYILESEEEGTVVAQNGASLSQKLLQLSNGAVYTDDED-VRLIHDKKLDK 310 Query: 59 LEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPAS 118 LE IIE++ PI++ Y+F D R+ + F + TL+ D + WN G I LL AHPAS Sbjct: 311 LEEIIEESQGQPILLFYNFKHDKERILQRFKEATTLE-DSNYKERWNSGDIKLLIAHPAS 369 Query: 119 CGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDE 178 GHGLNLQ GG+I+V+F L W LE +QQ R+ RQ G +++++ NTID+ Sbjct: 370 AGHGLNLQQGGHIIVWFGLTWSLELYQQANARL--YRQ---GQNHTTIIHHIMTDNTIDQ 424 Query: 179 LVLQRLRTKSTIQDLLLNALK 199 V + L+ K Q+ L+ A+K Sbjct: 425 RVYKALQNKELTQEELMKAIK 445 >gi|256617084|ref|ZP_05473930.1| phage-associated helicase [Enterococcus faecalis ATCC 4200] gi|257088353|ref|ZP_05582714.1| phage-associated helicase [Enterococcus faecalis D6] gi|256596611|gb|EEU15787.1| phage-associated helicase [Enterococcus faecalis ATCC 4200] gi|256996383|gb|EEU83685.1| phage-associated helicase [Enterococcus faecalis D6] Length = 451 Score = 135 bits (340), Expect = 3e-30, Method: Compositional matrix adjust. Identities = 85/197 (43%), Positives = 123/197 (62%), Gaps = 8/197 (4%) Query: 3 QYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVI 62 +Y KF+ +L L+ +I+A N+A + K LQ+ANGA+Y DE +HD+K+ ALE + Sbjct: 255 KYDKFKADLVLQLKDADIDAANAAVLSNKLLQMANGAIY-DEFNVSHHIHDQKLDALEDL 313 Query: 63 IEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHG 122 IE AN I++AY F DL R+++ F + K I+EWN+G IP+ HPAS GHG Sbjct: 314 IEGANGKSILIAYWFQHDLERIKERFKVRQI--KTAKDIEEWNKGNIPIGVIHPASAGHG 371 Query: 123 LNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQ 182 LNLQ GG+ LV+F L W LE +QQ R+ RQ G V ++++IA++TIDE V+ Sbjct: 372 LNLQAGGSTLVWFGLTWSLELYQQTNARL----WRQ-GQNETVVIHHIIAKDTIDEDVML 426 Query: 183 RLRTKSTIQDLLLNALK 199 L+ K Q L++A+K Sbjct: 427 ALKLKDKTQASLIDAVK 443 >gi|315128428|gb|EFT84436.1| SNF2 family N-terminal domain protein [Staphylococcus aureus subsp. aureus CGS03] gi|329729408|gb|EGG65813.1| SNF2 family N-terminal domain protein [Staphylococcus aureus subsp. aureus 21189] Length = 452 Score = 135 bits (340), Expect = 4e-30, Method: Compositional matrix adjust. Identities = 80/201 (39%), Positives = 119/201 (59%), Gaps = 16/201 (7%) Query: 8 QRELYCDLQGE---------NIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKA 58 +R++Y +L+ + A N AS + K LQL+NGAVY D+E + +HD+K+ Sbjct: 252 ERKVYAELEKNYILESEEEGTVVAQNGASLSQKLLQLSNGAVYTDDED-VRLIHDKKLDK 310 Query: 59 LEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPAS 118 LE IIE++ PI++ Y+F D R+ + F + TL+ D + WN G I LL AHPAS Sbjct: 311 LEEIIEESQGQPILLFYNFKHDKERILQRFKEATTLE-DSNYKERWNSGDIKLLIAHPAS 369 Query: 119 CGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDE 178 GHGLNLQ GG+I+V+F L W LE +QQ R+ RQ G +++++ NTID+ Sbjct: 370 AGHGLNLQQGGHIIVWFGLTWSLELYQQANARL--YRQ---GQNHTTIIHHIMTDNTIDQ 424 Query: 179 LVLQRLRTKSTIQDLLLNALK 199 V + L+ K Q+ L+ A+K Sbjct: 425 RVYKALQNKELTQEELMKAIK 445 >gi|262113725|emb|CAR95392.1| hypothetical protein [Streptococcus phage phi-m46.1] Length = 458 Score = 135 bits (339), Expect = 4e-30, Method: Compositional matrix adjust. Identities = 82/206 (39%), Positives = 122/206 (59%), Gaps = 11/206 (5%) Query: 2 KQYHKFQRE-LYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 ++Y +F++E + +L G + A N+AS T K +QL+NGAVY D+ +H++K+ ALE Sbjct: 254 EKYIQFKKEYVLSELDGLEVTAANAASLTSKLVQLSNGAVYSDDHSV-VALHEQKLDALE 312 Query: 61 VIIEKANAAPIIVAYHFNSDLAR----LQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHP 116 I+E AN P++ AY F DLAR L+K + R L K I+EWN+G + + HP Sbjct: 313 DILESANGEPVLGAYWFKHDLARILGRLEKLKVKSRVL-KTEEDIREWNKGNVSVGLLHP 371 Query: 117 ASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTI 176 A GHGLNLQ GG+ LV+F L W LE +QQ R+ RQ V + +++ + TI Sbjct: 372 AGAGHGLNLQKGGHHLVWFGLTWSLELYQQTNARL----WRQGQESETVIIQHIVTEGTI 427 Query: 177 DELVLQRLRTKSTIQDLLLNALKKET 202 DE +L+ L K Q+ L+ A+K + Sbjct: 428 DEEILKALENKDAQQERLIAAVKAQV 453 >gi|29028643|ref|NP_803332.1| helicase [Staphylococcus phage phi 12] gi|18920567|gb|AAL82307.1| phage helicase [Staphylococcus phage phi 12] Length = 423 Score = 135 bits (339), Expect = 4e-30, Method: Compositional matrix adjust. Identities = 80/201 (39%), Positives = 119/201 (59%), Gaps = 16/201 (7%) Query: 8 QRELYCDLQGE---------NIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKA 58 +R++Y +L+ + A N AS + K LQL+NGAVY D+E + +HD+K+ Sbjct: 223 ERKVYAELEKNYILESEEEGTVVAQNGASLSQKLLQLSNGAVYTDDEDV-RLIHDKKLDK 281 Query: 59 LEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPAS 118 LE IIE++ PI++ Y+F D R+ + F + TL+ D + WN G I LL AHPAS Sbjct: 282 LEEIIEESQGQPILLFYNFKHDKERILQRFKEATTLE-DSNYKERWNSGDIKLLIAHPAS 340 Query: 119 CGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDE 178 GHGLNLQ GG+I+V+F L W LE +QQ R+ RQ G +++++ NTID+ Sbjct: 341 AGHGLNLQQGGHIIVWFGLTWSLELYQQANARL--YRQ---GQNHTTIIHHIMTDNTIDQ 395 Query: 179 LVLQRLRTKSTIQDLLLNALK 199 V + L+ K Q+ L+ A+K Sbjct: 396 RVYKALQNKELTQEELMKAIK 416 >gi|258427143|ref|ZP_05688065.1| SNF2 family protein [Staphylococcus aureus A9299] gi|257849921|gb|EEV73880.1| SNF2 family protein [Staphylococcus aureus A9299] Length = 455 Score = 135 bits (339), Expect = 4e-30, Method: Compositional matrix adjust. Identities = 80/201 (39%), Positives = 119/201 (59%), Gaps = 16/201 (7%) Query: 8 QRELYCDLQGE---------NIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKA 58 +R++Y +L+ + A N AS + K LQL+NGAVY D+E + +HD+K+ Sbjct: 255 ERKVYAELEKNYILESEEEGTVVAQNGASLSQKLLQLSNGAVYTDDED-VRLIHDKKLDK 313 Query: 59 LEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPAS 118 LE IIE++ PI++ Y+F D R+ + F + TL+ D + WN G I LL AHPAS Sbjct: 314 LEEIIEESQGQPILLFYNFKHDKERILQRFKEATTLE-DSNYKERWNSGDIKLLIAHPAS 372 Query: 119 CGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDE 178 GHGLNLQ GG+I+V+F L W LE +QQ R+ RQ G +++++ NTID+ Sbjct: 373 AGHGLNLQQGGHIIVWFGLTWSLELYQQANARL--YRQ---GQNHTTIIHHIMTDNTIDQ 427 Query: 179 LVLQRLRTKSTIQDLLLNALK 199 V + L+ K Q+ L+ A+K Sbjct: 428 RVYKALQNKELTQEELMKAIK 448 >gi|66395664|ref|YP_240070.1| ORF008 [Staphylococcus phage 47] gi|88195255|ref|YP_500058.1| SNF2 family protein [Staphylococcus aureus subsp. aureus NCTC 8325] gi|258445562|ref|ZP_05693744.1| phage helicase [Staphylococcus aureus A6300] gi|258455568|ref|ZP_05703525.1| conserved hypothetical protein [Staphylococcus aureus A5937] gi|297207823|ref|ZP_06924257.1| SNF2 domain protein [Staphylococcus aureus subsp. aureus ATCC 51811] gi|62636088|gb|AAX91199.1| ORF008 [Staphylococcus phage 47] gi|87202813|gb|ABD30623.1| SNF2 family N-terminal domain protein [Staphylococcus aureus subsp. aureus NCTC 8325] gi|257855609|gb|EEV78542.1| phage helicase [Staphylococcus aureus A6300] gi|257862256|gb|EEV85027.1| conserved hypothetical protein [Staphylococcus aureus A5937] gi|296887539|gb|EFH26438.1| SNF2 domain protein [Staphylococcus aureus subsp. aureus ATCC 51811] Length = 455 Score = 135 bits (339), Expect = 4e-30, Method: Compositional matrix adjust. Identities = 80/201 (39%), Positives = 119/201 (59%), Gaps = 16/201 (7%) Query: 8 QRELYCDLQGE---------NIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKA 58 +R++Y +L+ + A N AS + K LQL+NGAVY D+E + +HD+K+ Sbjct: 255 ERKVYAELEKNYILESEEEGTVVAQNGASLSQKLLQLSNGAVYTDDED-VRLIHDKKLDK 313 Query: 59 LEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPAS 118 LE IIE++ PI++ Y+F D R+ + F + TL+ D + WN G I LL AHPAS Sbjct: 314 LEEIIEESQGQPILLFYNFKHDKERILQRFKEATTLE-DSNYKERWNSGDIKLLIAHPAS 372 Query: 119 CGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDE 178 GHGLNLQ GG+I+V+F L W LE +QQ R+ RQ G +++++ NTID+ Sbjct: 373 AGHGLNLQQGGHIIVWFGLTWSLELYQQANARL--YRQ---GQNHTTIIHHIMTDNTIDQ 427 Query: 179 LVLQRLRTKSTIQDLLLNALK 199 V + L+ K Q+ L+ A+K Sbjct: 428 RVYKALQNKELTQEELMKAIK 448 >gi|304406781|ref|ZP_07388436.1| SNF2-related protein [Paenibacillus curdlanolyticus YK9] gi|304344314|gb|EFM10153.1| SNF2-related protein [Paenibacillus curdlanolyticus YK9] Length = 467 Score = 135 bits (339), Expect = 5e-30, Method: Compositional matrix adjust. Identities = 81/201 (40%), Positives = 119/201 (59%), Gaps = 9/201 (4%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEV 61 K Y K +++L ++G I A ++A T K LQL NGA+Y D ++ E+HD KI+A Sbjct: 265 KLYDKLEKDLLLQVEGTEITATSAAVLTGKLLQLCNGALY-DGDRQVHEIHDNKIEAFME 323 Query: 62 IIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQE---WNEGKIPLLFAHPAS 118 +IE+ N +V Y + DLAR++ A + ++ T Q+ WN G++ +L AHPAS Sbjct: 324 LIEQLNGKSALVFYSYQHDLARIKSALSKSGLRIRELSTPQDQLDWNAGEVDILLAHPAS 383 Query: 119 CGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDE 178 +GLNLQ GGN +V+F L W LE +QQ R+ RQ G K+ V +++L+ Q DE Sbjct: 384 AAYGLNLQDGGNHVVWFGLNWSLELYQQANGRL----HRQ-GQKQKVILHHLVVQGGADE 438 Query: 179 LVLQRLRTKSTIQDLLLNALK 199 V+ L K+ +QD LL ALK Sbjct: 439 DVMAALEGKAAMQDKLLEALK 459 >gi|257428238|ref|ZP_05604636.1| SNF2 family protein [Staphylococcus aureus subsp. aureus 65-1322] gi|257275079|gb|EEV06566.1| SNF2 family protein [Staphylococcus aureus subsp. aureus 65-1322] Length = 455 Score = 134 bits (338), Expect = 5e-30, Method: Compositional matrix adjust. Identities = 77/178 (43%), Positives = 110/178 (61%), Gaps = 7/178 (3%) Query: 22 AFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDL 81 A N AS + K LQL+NGAVY D+E + +HD+K+ LE IIE++ PI++ Y+F D Sbjct: 278 AQNGASLSQKLLQLSNGAVYTDDED-VRLIHDKKLDKLEEIIEESQGQPILLFYNFKHDK 336 Query: 82 ARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDL 141 R+ + F + TL+ D + WN G I LL AHPAS GHGLNLQ GG+I+V+F L W L Sbjct: 337 ERILQRFKEATTLE-DSNYKERWNSGDIKLLIAHPASAGHGLNLQQGGHIIVWFGLTWSL 395 Query: 142 EEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 E +QQ R+ RQ G +++++ NTID+ V + L+ K Q+ L+ A+K Sbjct: 396 ELYQQANARL--YRQ---GQNHTTIIHHIMTDNTIDQRVYKALQNKELTQEELMKAIK 448 >gi|257432448|ref|ZP_05608811.1| SNF2 family protein [Staphylococcus aureus subsp. aureus E1410] gi|257283327|gb|EEV13459.1| SNF2 family protein [Staphylococcus aureus subsp. aureus E1410] Length = 455 Score = 134 bits (338), Expect = 5e-30, Method: Compositional matrix adjust. Identities = 77/178 (43%), Positives = 110/178 (61%), Gaps = 7/178 (3%) Query: 22 AFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDL 81 A N AS + K LQL+NGAVY D+E + +HD+K+ LE IIE++ PI++ Y+F D Sbjct: 278 AQNGASLSQKLLQLSNGAVYTDDED-VRLIHDKKLDKLEEIIEESQGQPILLFYNFKHDK 336 Query: 82 ARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDL 141 R+ + F + TL+ D + WN G I LL AHPAS GHGLNLQ GG+I+V+F L W L Sbjct: 337 ERILQRFKEATTLE-DSNYKERWNSGDIKLLIAHPASAGHGLNLQQGGHIIVWFGLTWSL 395 Query: 142 EEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 E +QQ R+ RQ G +++++ NTID+ V + L+ K Q+ L+ A+K Sbjct: 396 ELYQQANARL--YRQ---GQNHTTIIHHIMTDNTIDQRVYKALQNKELTQEELMKAIK 448 >gi|66395597|ref|YP_239997.1| ORF009 [Staphylococcus phage 3A] gi|62635943|gb|AAX91054.1| ORF009 [Staphylococcus phage 3A] Length = 455 Score = 134 bits (338), Expect = 5e-30, Method: Compositional matrix adjust. Identities = 77/178 (43%), Positives = 110/178 (61%), Gaps = 7/178 (3%) Query: 22 AFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDL 81 A N AS + K LQL+NGAVY D+E + +HD+K+ LE IIE++ PI++ Y+F D Sbjct: 278 AQNGASLSQKLLQLSNGAVYTDDED-VRLIHDKKLDKLEEIIEESQGQPILLFYNFKHDK 336 Query: 82 ARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDL 141 R+ + F + TL+ D + WN G I LL AHPAS GHGLNLQ GG+I+V+F L W L Sbjct: 337 ERILQRFKEATTLE-DSNYKERWNSGDIKLLIAHPASAGHGLNLQQGGHIIVWFGLTWSL 395 Query: 142 EEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 E +QQ R+ RQ G +++++ NTID+ V + L+ K Q+ L+ A+K Sbjct: 396 ELYQQANARL--YRQ---GQNHTTIIHHIMTDNTIDQRVYKALQNKELTQEELMKAIK 448 >gi|227496460|ref|ZP_03926744.1| helicase [Actinomyces urogenitalis DSM 15434] gi|226834016|gb|EEH66399.1| helicase [Actinomyces urogenitalis DSM 15434] Length = 457 Score = 134 bits (336), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 79/199 (39%), Positives = 116/199 (58%), Gaps = 7/199 (3%) Query: 3 QYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVI 62 Y + ++ L G ++A N+A + K LQ+A+G VY D+ EVH KI AL + Sbjct: 255 HYEALREQMVLGLDGALVDAGNAAGLSNKLLQMASGCVY-DDGGAVVEVHRAKIDALADL 313 Query: 63 IEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHG 122 IE A+ +P++VAY + SDL RL +A P L + ++++WN G IP+ HPAS GHG Sbjct: 314 IEAASGSPVMVAYWYASDLERLLQAVPGAVEL-RSAESMRQWNAGCIPVGLIHPASAGHG 372 Query: 123 LNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQ 182 LNLQ GG+ LV+ + W LE +QQ R+ RQ Q V +++LIA TID VL+ Sbjct: 373 LNLQAGGHHLVWLTAPWSLELYQQTNARLA--RQGQ---THPVSIHHLIAAGTIDVDVLR 427 Query: 183 RLRTKSTIQDLLLNALKKE 201 L K Q L++A++ + Sbjct: 428 ALERKDVTQSALVDAVRAQ 446 >gi|312897717|ref|ZP_07757133.1| protein, SNF2 family [Megasphaera micronuciformis F0359] gi|310621101|gb|EFQ04645.1| protein, SNF2 family [Megasphaera micronuciformis F0359] Length = 463 Score = 133 bits (334), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 80/203 (39%), Positives = 125/203 (61%), Gaps = 11/203 (5%) Query: 2 KQYHKFQRELYCDL--QGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKAL 59 + Y + + + +L GE I A ++A+ + K QLANGAVY DE ++ E+HD KI+A Sbjct: 254 RDYDEMETRMVLELVESGEEITAVSAAALSTKLQQLANGAVY-DELRNVHEIHDCKIEAF 312 Query: 60 EVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD---PCTIQEWNEGKIPLLFAHP 116 + +IE+ + P +V Y+F DL RL+ A + + + K+ +EWNEGKI +L AHP Sbjct: 313 KELIEQLSGKPALVFYNFKHDLERLKAALDKSKLIVKELKGATEEREWNEGKIDVLLAHP 372 Query: 117 ASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTI 176 AS +GLNLQ GGN +++F L W LE +QQ +R+ RQ G + V +++LI+ T Sbjct: 373 ASTAYGLNLQDGGNHVIWFGLNWSLELYQQANKRL----HRQ-GQREKVIIHHLISIGTR 427 Query: 177 DELVLQRLRTKSTIQDLLLNALK 199 DE +++ L K+ Q+ +L +LK Sbjct: 428 DEDMMEALNRKADAQEYVLQSLK 450 >gi|160935260|ref|ZP_02082643.1| hypothetical protein CLOBOL_00156 [Clostridium bolteae ATCC BAA-613] gi|158441991|gb|EDP19688.1| hypothetical protein CLOBOL_00156 [Clostridium bolteae ATCC BAA-613] Length = 456 Score = 131 bits (329), Expect = 6e-29, Method: Compositional matrix adjust. Identities = 85/201 (42%), Positives = 121/201 (60%), Gaps = 9/201 (4%) Query: 1 MKQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 M++Y + ++E +L G+ I A ++A+ K LQLANGA Y D E + +HD K+ AL Sbjct: 253 MRKYRELEKEKLLELDGKEITALSAAAVWGKLLQLANGAAY-DGEGNVIPLHDRKLDALA 311 Query: 61 VIIEKANAAPIIVAYHFNSDLARLQKAFP--QGRTLDKDPCTIQEWNEGKIPLLFAHPAS 118 I+E + P++V Y+F D RL F RTL K I++WNEG+IPLL A PAS Sbjct: 312 EILEASGGHPVLVFYNFRHDYDRLMGRFKGYNPRTL-KSQQDIRDWNEGRIPLLLAQPAS 370 Query: 119 CGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDE 178 GHGLN+Q GG+I+V+F L LE + Q R+ RQ G AV ++ LI + T+DE Sbjct: 371 MGHGLNIQAGGHIIVWFGLNPSLELYLQANARL----HRQ-GQTEAVIIHRLITKGTVDE 425 Query: 179 LVLQRLRTKSTIQDLLLNALK 199 V+++L K QD L+ +LK Sbjct: 426 DVVKKLWVKDETQDGLMESLK 446 >gi|269120031|ref|YP_003308208.1| SNF2-related protein [Sebaldella termitidis ATCC 33386] gi|268613909|gb|ACZ08277.1| SNF2-related protein [Sebaldella termitidis ATCC 33386] Length = 458 Score = 131 bits (329), Expect = 6e-29, Method: Compositional matrix adjust. Identities = 82/204 (40%), Positives = 121/204 (59%), Gaps = 13/204 (6%) Query: 2 KQYHKFQRELYCDL--QGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKAL 59 K Y + ++E+ +L GE I+ ++A+ T K LQL+NGAVY DE++ EVH+ KI+A Sbjct: 254 KAYDELEKEMILELIETGETIDVTSAAALTNKLLQLSNGAVY-DEDRKVHEVHNCKIEAF 312 Query: 60 EVIIEKANAAPIIVAYHFNSDLARLQKAFPQ----GRTLDKDPCTIQEWNEGKIPLLFAH 115 ++E N P +V Y F D R++KA + R L D + +WN +I +L +H Sbjct: 313 MELVEALNGQPALVFYSFQHDKDRIKKALSKLKLRVRELKTDQ-DVTDWNNREIDILLSH 371 Query: 116 PASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNT 175 PAS +GLNLQ GGN +++F L W LE +QQ +R+ RQ G VF+++LI + T Sbjct: 372 PASSAYGLNLQRGGNHIIWFGLNWSLELYQQANKRL----HRQ-GQTEKVFIHHLITEGT 426 Query: 176 IDELVLQRLRTKSTIQDLLLNALK 199 D V+ L K IQ+ LLN+LK Sbjct: 427 RDTDVMAALGDKGDIQESLLNSLK 450 >gi|238898768|ref|YP_002924450.1| phage DNA helicase, partial [Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum)] gi|229466528|gb|ACQ68302.1| phage DNA helicase, partial [Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum)] Length = 157 Score = 131 bits (329), Expect = 7e-29, Method: Compositional matrix adjust. Identities = 68/143 (47%), Positives = 93/143 (65%), Gaps = 5/143 (3%) Query: 59 LEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPAS 118 +E +I++A P++VAY++ SDLA ++ FP+ + TI WN GKIPLL AHPAS Sbjct: 1 MEEMIQEAAGQPVLVAYNYQSDLALIKVRFPKAELIGHAADTIDRWNTGKIPLLLAHPAS 60 Query: 119 CGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDE 178 GHGLNLQ GGNI+V+F L W LE +QQ R+ RQ G R VF+++L+ ++ID Sbjct: 61 AGHGLNLQSGGNIIVWFGLNWSLELYQQFNARL----HRQ-GQTRPVFIHHLVMNDSIDL 115 Query: 179 LVLQRLRTKSTIQDLLLNALKKE 201 VL+ L K Q LL+ALKK+ Sbjct: 116 TVLEALENKHITQKALLDALKKD 138 >gi|322382458|ref|ZP_08056353.1| ATP-binding SNF2 helicase-like protein/protein kinase-like protein [Paenibacillus larvae subsp. larvae B-3650] gi|321153571|gb|EFX45960.1| ATP-binding SNF2 helicase-like protein/protein kinase-like protein [Paenibacillus larvae subsp. larvae B-3650] Length = 463 Score = 130 bits (326), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 76/173 (43%), Positives = 106/173 (61%), Gaps = 10/173 (5%) Query: 31 KCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQ 90 K LQ+A+GAVY DEE+ KE+H+ K+ ALE I+E + P++V Y++ L R+Q+ FPQ Sbjct: 283 KLLQMASGAVY-DEERGVKEIHEAKLDALEDILEASQGKPVMVFYNYKHSLQRVQQRFPQ 341 Query: 91 GRTLDKDPCTIQ---EWNEGKIPLLFAHPASCGHGLNLQYGG-NILVFFSLWWDLEEHQQ 146 R L K +Q +WN KIPLL HP S GHGLNLQ +++F W LEE QQ Sbjct: 342 ARILRKGKEGVQDITDWNTNKIPLLLLHPKSAGHGLNLQESNCQTVIWFDQIWSLEEFQQ 401 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 R V RQ G R + V L+A+ T+DE V++ + K+T Q+ L+ A+K Sbjct: 402 ANAR--VYRQ---GQTRKIVVMQLVAEGTMDEEVVEAIDKKATGQEELMQAVK 449 >gi|66395458|ref|YP_239852.1| ORF008 [Staphylococcus phage 2638A] gi|62635885|gb|AAX90996.1| ORF008 [Staphylococcus phage 2638A] Length = 452 Score = 130 bits (326), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 80/201 (39%), Positives = 117/201 (58%), Gaps = 16/201 (7%) Query: 8 QRELYCDLQGE---------NIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKA 58 +R+LY +L+ I A + AS + K LQL+NGAVY D+E + +HD K+ Sbjct: 252 ERKLYDELEKHYILESEEDGTIVAQSGASLSQKLLQLSNGAVYTDDES-VRHLHDRKLDK 310 Query: 59 LEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPAS 118 LE IIE++ P++V Y+F D R+ + F + TL D W +GK+ +L AHPAS Sbjct: 311 LEEIIEESQGQPLLVFYNFKHDKERIMERFDEVVTLG-DESYKDRWIKGKVKILLAHPAS 369 Query: 119 CGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDE 178 GHGLNLQ GG+I+V+F L W LE +QQ R+ RQ Q +++++ NTID+ Sbjct: 370 AGHGLNLQKGGHIIVWFGLTWSLELYQQANARL--YRQGQT---HTTIIHHIMTDNTIDQ 424 Query: 179 LVLQRLRTKSTIQDLLLNALK 199 V Q L+ K Q+ L+ A+K Sbjct: 425 KVYQALQNKELTQEDLMQAIK 445 >gi|237738632|ref|ZP_04569113.1| conserved hypothetical protein [Fusobacterium sp. 2_1_31] gi|229424115|gb|EEO39162.1| conserved hypothetical protein [Fusobacterium sp. 2_1_31] Length = 438 Score = 128 bits (321), Expect = 5e-28, Method: Compositional matrix adjust. Identities = 78/207 (37%), Positives = 121/207 (58%), Gaps = 9/207 (4%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEV 61 K Y + +++ +L+ I N+A+ + K LQLANGA+Y DE + EVHD KI+ Sbjct: 227 KAYDELEKKAILELEDTEITVANAAALSNKLLQLANGAIY-DENRKVFEVHDCKIERFLE 285 Query: 62 IIEKANAAPIIVAYHFNSDLARLQKAFPQGR---TLDKDPCTIQEWNEGKIPLLFAHPAS 118 +IE+ N P +V Y+F D R+ +A + L K P +WN+G+I +L AHPAS Sbjct: 286 LIEQLNGKPALVFYNFQHDKDRIIEALKDSKLRIRLLKTPQDQLDWNKGEIDILLAHPAS 345 Query: 119 CGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDE 178 +GLNLQ GGN +++F L W LE +QQ +R+ RQ G V +++L+ + T DE Sbjct: 346 AAYGLNLQAGGNHVIWFGLNWSLELYQQANKRL----HRQ-GQTEKVIIHHLVCKETRDE 400 Query: 179 LVLQRLRTKSTIQDLLLNALKKETIHV 205 V++ L+ K +Q+ L+ +LK + V Sbjct: 401 DVMEALQNKGDVQEALVESLKVRIMKV 427 >gi|312438077|gb|ADQ77148.1| SNF2 domain protein [Staphylococcus aureus subsp. aureus TCH60] Length = 455 Score = 127 bits (319), Expect = 9e-28, Method: Compositional matrix adjust. Identities = 78/178 (43%), Positives = 110/178 (61%), Gaps = 7/178 (3%) Query: 22 AFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDL 81 A N AS + K LQL+NGAVY D+E + +HD+K+ LE IIE++ PI++ Y+F D Sbjct: 278 AQNGASLSQKLLQLSNGAVYTDDE-DVRLIHDKKLDKLEEIIEESQGQPILLFYNFKHDK 336 Query: 82 ARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDL 141 R+ + F + TL+ D + WN G I LL AHPAS GHGLNLQ GG+I+V+F L W L Sbjct: 337 ERILQRFKEATTLE-DSNYKERWNSGDIKLLIAHPASAGHGLNLQQGGHIIVWFGLTWSL 395 Query: 142 EEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 E +QQ R+ RQ G ++++I NTID+ V + L+ K Q+ L+ A+K Sbjct: 396 ELYQQANARL--YRQ---GQNHTTIIHHIITDNTIDQRVYKALQNKELTQEELMKAIK 448 >gi|282911093|ref|ZP_06318895.1| SNF2 family protein [Staphylococcus aureus subsp. aureus WBG10049] gi|282324788|gb|EFB55098.1| SNF2 family protein [Staphylococcus aureus subsp. aureus WBG10049] Length = 455 Score = 127 bits (318), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 78/178 (43%), Positives = 110/178 (61%), Gaps = 7/178 (3%) Query: 22 AFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDL 81 A N AS + K LQL+NGAVY D+E + +HD+K+ LE IIE++ PI++ Y+F D Sbjct: 278 AQNGASLSQKLLQLSNGAVYTDDE-DVRLIHDKKLDKLEEIIEESQGQPILLFYNFKHDK 336 Query: 82 ARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDL 141 R+ + F + TL+ D + WN G I LL AHPAS GHGLNLQ GG+I+V+F L W L Sbjct: 337 ERILQRFKEATTLE-DSNYKERWNSGDIKLLIAHPASAGHGLNLQQGGHIIVWFGLTWSL 395 Query: 142 EEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 E +QQ R+ RQ G ++++I NTID+ V + L+ K Q+ L+ A+K Sbjct: 396 ELYQQANARL--YRQ---GQNHTTIIHHIITDNTIDQRVYKALQNKELTQEELMKAIK 448 >gi|266623803|ref|ZP_06116738.1| SNF2 domain protein [Clostridium hathewayi DSM 13479] gi|288864375|gb|EFC96673.1| SNF2 domain protein [Clostridium hathewayi DSM 13479] Length = 457 Score = 124 bits (312), Expect = 6e-27, Method: Compositional matrix adjust. Identities = 77/201 (38%), Positives = 116/201 (57%), Gaps = 9/201 (4%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEV 61 K Y++ +RE+ L E I ++A+ + K LQLANGAVY DE+ EVH+ KI+A Sbjct: 255 KAYYEMEREMVLALPEEEISVTSAAALSNKLLQLANGAVY-DEDHSVHEVHNCKIEAFME 313 Query: 62 IIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQE---WNEGKIPLLFAHPAS 118 +IE P +V Y+F D AR+ KA + ++ T Q+ WN KI +L HPAS Sbjct: 314 LIESLQGKPALVFYNFQHDRARILKALEKTGLRVRELKTTQDEDDWNARKIDILLTHPAS 373 Query: 119 CGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDE 178 +GLNLQ GGN +++F L W+ E + Q +R+ RQ G + V +++LI T DE Sbjct: 374 SAYGLNLQQGGNHVIWFGLTWNYELYTQANKRL----HRQ-GQEEKVIIHHLICSGTRDE 428 Query: 179 LVLQRLRTKSTIQDLLLNALK 199 V++ L+ K +Q ++ +LK Sbjct: 429 DVMEALKRKDDVQSWVMESLK 449 >gi|258646424|ref|ZP_05733893.1| SNF2 domain protein [Dialister invisus DSM 15470] gi|260403827|gb|EEW97374.1| SNF2 domain protein [Dialister invisus DSM 15470] Length = 459 Score = 122 bits (305), Expect = 4e-26, Method: Compositional matrix adjust. Identities = 77/203 (37%), Positives = 121/203 (59%), Gaps = 12/203 (5%) Query: 2 KQYHKFQRELYCDLQGENI-EAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 + Y++ ++++ DL +++ + ++A+ + K QLANGAVY D+ W+E+H++KI+A Sbjct: 254 RDYNELEKKMVLDLGDDHVLDVTSAAALSNKLQQLANGAVYTDDGG-WQEIHNDKIEAFM 312 Query: 61 VIIEKANAAPIIVAYHFNSDLARLQKAFPQG----RTLDKDPCTIQEWNEGKIPLLFAHP 116 +IE+ N IV Y+F DL RL+ A + R L + +WN GK+ +L AHP Sbjct: 313 ELIEQLNGKHAIVFYNFRHDLDRLRAALQKTNLHIRQLQTSADEL-DWNAGKVDILLAHP 371 Query: 117 ASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTI 176 AS +GLNLQ GGN +V+F L W LE +QQ +R+ RQ G K V V+ LI + T Sbjct: 372 ASTAYGLNLQDGGNHVVWFGLNWSLELYQQANKRL----HRQ-GQKNRVIVHQLICEGTR 426 Query: 177 DELVLQRLRTKSTIQDLLLNALK 199 DE + + L K Q ++++LK Sbjct: 427 DEDLARALLMKDAAQQYVMDSLK 449 >gi|156603990|ref|YP_001429936.1| hypothetical protein SPTP3102_gp41 [Staphylococcus phage tp310-2] gi|154818076|gb|ABS87503.1| hypothetical protein [Staphylococcus phage tp310-2] Length = 455 Score = 122 bits (305), Expect = 4e-26, Method: Compositional matrix adjust. Identities = 81/201 (40%), Positives = 120/201 (59%), Gaps = 16/201 (7%) Query: 8 QRELYCDLQGE---------NIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKA 58 +R+LY +L+ + A N AS + K LQL+NGAVY D+ +E+HD+K++ Sbjct: 255 ERKLYDELEKHYILESEEEGTVVAQNGASLSQKLLQLSNGAVYTDD-GDVREIHDKKLEK 313 Query: 59 LEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPAS 118 LE IIE++ PI++ Y+F D R+ + F + TL+ D + WN G I LL AHPAS Sbjct: 314 LEEIIEESQGQPILLFYNFKHDKERILERFKEATTLE-DSNYKERWNSGNIKLLIAHPAS 372 Query: 119 CGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDE 178 GHGLNLQ GG+I+V+F L W LE +QQ R+ RQ G +++++ NTID+ Sbjct: 373 AGHGLNLQQGGHIIVWFGLTWSLELYQQANARL--YRQ---GQNHTTIIHHIMTDNTIDQ 427 Query: 179 LVLQRLRTKSTIQDLLLNALK 199 V + L+ K Q+ L+ A+K Sbjct: 428 RVYEALQNKELTQEELMKAIK 448 >gi|283469596|emb|CAQ48807.1| SNF2 family N-domain protein [Staphylococcus aureus subsp. aureus ST398] Length = 452 Score = 120 bits (301), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 77/178 (43%), Positives = 110/178 (61%), Gaps = 7/178 (3%) Query: 22 AFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDL 81 A N AS + K LQL+NGAVY D +E+HD+K++ LE IIE++ PI++ Y+F D Sbjct: 275 AQNGASLSQKLLQLSNGAVYTDN-GDVREIHDKKLEKLEEIIEESQGQPILLFYNFKHDK 333 Query: 82 ARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDL 141 R+ + F + TL+ D + WN G I LL AHPAS GHGLNLQ GG+I+V+F L W L Sbjct: 334 ERILQRFKEATTLE-DSNYKERWNSGDIKLLIAHPASAGHGLNLQQGGHIIVWFGLTWSL 392 Query: 142 EEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 E +QQ R+ RQ G +++++ NTID+ V + L+ K Q+ L+ A+K Sbjct: 393 ELYQQANARL--YRQ---GQNHTTIIHHIMTDNTIDQRVYKALQNKELTQEELMKAIK 445 >gi|66395514|ref|YP_239930.1| ORF006 [Staphylococcus phage 42E] gi|215401142|ref|YP_002332397.1| putative helicase [Staphylococcus phage phiSauS-IPLA35] gi|62636007|gb|AAX91118.1| ORF006 [Staphylococcus phage 42E] gi|215260493|gb|ACJ64623.1| gp34 [Staphylococcus phage phiSauS-IPLA35] Length = 455 Score = 120 bits (301), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 81/201 (40%), Positives = 119/201 (59%), Gaps = 16/201 (7%) Query: 8 QRELYCDLQGE---------NIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKA 58 +R+LY +L+ + A N AS + K LQL+NGAVY D +E+HD+K++ Sbjct: 255 ERKLYDELEKHYILESEEDGTVVAQNGASLSQKLLQLSNGAVYTDN-GDVREIHDKKLEK 313 Query: 59 LEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPAS 118 LE IIE++ PI++ Y+F D R+ + F + TL+ D + WN G I LL AHPAS Sbjct: 314 LEEIIEESQGQPILLFYNFKHDKERILQRFKEATTLE-DSNYKERWNSGDIKLLIAHPAS 372 Query: 119 CGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDE 178 GHGLNLQ GG+I+V+F L W LE +QQ R+ RQ G +++++ NTID+ Sbjct: 373 AGHGLNLQQGGHIIVWFGLTWSLELYQQANARL--YRQ---GQNHTTIMHHIMTDNTIDQ 427 Query: 179 LVLQRLRTKSTIQDLLLNALK 199 V + L+ K Q+ L+ A+K Sbjct: 428 RVYKALQNKELTQEELMKAIK 448 >gi|323438429|gb|EGA96184.1| phage helicase [Staphylococcus aureus O11] Length = 452 Score = 119 bits (297), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 81/201 (40%), Positives = 118/201 (58%), Gaps = 16/201 (7%) Query: 8 QRELYCDLQGE---------NIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKA 58 +R+LY +L+ + A N AS + K LQL+NGAVY D+ + +HD+K++ Sbjct: 252 ERKLYDELEKHYILESEEDGTVVAQNGASLSQKLLQLSNGAVYTDD-GDVRGIHDKKLEK 310 Query: 59 LEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPAS 118 LE IIE++ PI++ Y+F D R+ + F + TL+ D + WN G I LL AHPAS Sbjct: 311 LEEIIEESQGQPILLFYNFKHDKERILERFKEATTLE-DSNYKERWNSGDIKLLIAHPAS 369 Query: 119 CGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDE 178 GHGLNLQ GG+I+V F L W LE +QQ R+ RQ G +++L+ NTID+ Sbjct: 370 AGHGLNLQQGGHIIVSFGLTWSLELYQQANARL--YRQ---GQNHTTIIHHLMTDNTIDQ 424 Query: 179 LVLQRLRTKSTIQDLLLNALK 199 V + L+ K Q+ L+ A+K Sbjct: 425 RVYKALQNKELTQEELMKAIK 445 >gi|322691254|ref|YP_004220824.1| phage protein [Bifidobacterium longum subsp. longum JCM 1217] gi|320456110|dbj|BAJ66732.1| hypothetical phage protein [Bifidobacterium longum subsp. longum JCM 1217] Length = 460 Score = 115 bits (288), Expect = 4e-24, Method: Compositional matrix adjust. Identities = 70/206 (33%), Positives = 113/206 (54%), Gaps = 11/206 (5%) Query: 4 YHKFQRELYCDLQ-GENIEAFNSASKTVKCLQLANGAVYYD---EEKHWKEVHDEKIKAL 59 Y + +R++ DL G + N+ T K QL G +Y D E + V D K+ AL Sbjct: 260 YDRLRRQMVADLDDGTTVTVANAGVLTAKLAQLTCGCLYPDADDPEGTIRHVDDVKLDAL 319 Query: 60 EVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASC 119 II A+ P++V Y F +L R++ FP R + + ++EW G++PLL AHP + Sbjct: 320 ADIISAADG-PVLVFYQFTDELERMRARFPGMREVHEQ-GVLEEWRNGRVPLLAAHPQAA 377 Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 +GLN+Q GG+ +V+ SL W ++++Q +R+ RQ G KR V V+ L+ NT+D Sbjct: 378 KYGLNIQDGGHEIVWTSLPWSFDDYRQACDRL----HRQ-GQKRTVRVHRLLESNTVDRR 432 Query: 180 VLQRLRTKSTIQDLLLNALKKETIHV 205 L L + + + +++AL+ ET V Sbjct: 433 KLDVLTGRMMLHEAVMDALEGETAGV 458 >gi|320458171|dbj|BAJ68792.1| hypothetical phage protein [Bifidobacterium longum subsp. infantis ATCC 15697] Length = 460 Score = 115 bits (287), Expect = 4e-24, Method: Compositional matrix adjust. Identities = 69/206 (33%), Positives = 114/206 (55%), Gaps = 11/206 (5%) Query: 4 YHKFQRELYCDLQ-GENIEAFNSASKTVKCLQLANGAVYYD---EEKHWKEVHDEKIKAL 59 Y + +R++ DL G + A N+ T K QL G +Y D E + V D K+ AL Sbjct: 260 YDRLRRQMVADLDDGTTVTAANAGVLTAKLAQLTCGCLYPDADDPEGTIRHVDDVKLDAL 319 Query: 60 EVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASC 119 II A+ P++V Y F +L R++ FP R + + ++EW G++PLL AHP + Sbjct: 320 ADIIGAADG-PVLVFYQFTDELERMRARFPGMREVHEQ-GVLEEWRNGRVPLLAAHPQAA 377 Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 +GLN+Q GG+ +V+ SL W ++++Q +R+ RQ G KR V V+ L+ NT+D Sbjct: 378 KYGLNIQDGGHEIVWTSLPWSFDDYRQACDRL----HRQ-GQKRTVRVHRLLESNTVDRR 432 Query: 180 VLQRLRTKSTIQDLLLNALKKETIHV 205 L L + + + +++A++ ET + Sbjct: 433 KLDVLTGRMMLHEAVMDAVEGETTGI 458 >gi|213692059|ref|YP_002322645.1| SNF2-related protein [Bifidobacterium longum subsp. infantis ATCC 15697] gi|213523520|gb|ACJ52267.1| SNF2-related protein [Bifidobacterium longum subsp. infantis ATCC 15697] Length = 464 Score = 115 bits (287), Expect = 5e-24, Method: Compositional matrix adjust. Identities = 69/206 (33%), Positives = 114/206 (55%), Gaps = 11/206 (5%) Query: 4 YHKFQRELYCDLQ-GENIEAFNSASKTVKCLQLANGAVYYD---EEKHWKEVHDEKIKAL 59 Y + +R++ DL G + A N+ T K QL G +Y D E + V D K+ AL Sbjct: 264 YDRLRRQMVADLDDGTTVTAANAGVLTAKLAQLTCGCLYPDADDPEGTIRHVDDVKLDAL 323 Query: 60 EVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASC 119 II A+ P++V Y F +L R++ FP R + + ++EW G++PLL AHP + Sbjct: 324 ADIIGAADG-PVLVFYQFTDELERMRARFPGMREVHEQ-GVLEEWRNGRVPLLAAHPQAA 381 Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 +GLN+Q GG+ +V+ SL W ++++Q +R+ RQ G KR V V+ L+ NT+D Sbjct: 382 KYGLNIQDGGHEIVWTSLPWSFDDYRQACDRL----HRQ-GQKRTVRVHRLLESNTVDRR 436 Query: 180 VLQRLRTKSTIQDLLLNALKKETIHV 205 L L + + + +++A++ ET + Sbjct: 437 KLDVLTGRMMLHEAVMDAVEGETTGI 462 >gi|227544270|ref|ZP_03974319.1| possible helicase [Lactobacillus reuteri CF48-3A] gi|227185750|gb|EEI65821.1| possible helicase [Lactobacillus reuteri CF48-3A] Length = 224 Score = 113 bits (282), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 58/126 (46%), Positives = 81/126 (64%), Gaps = 3/126 (2%) Query: 4 YHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVII 63 Y + +L QG+ I+A N+AS + K Q+ANG VY D+++ ++H K+ ALE ++ Sbjct: 102 YDELNAQLVVSTQGKQIDALNAASLSNKLCQMANGCVY-DDQQQIVQIHQRKLDALEDLV 160 Query: 64 EKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGL 123 E AN P++VAY F DL +++ F + R + K P IQ+WN GKIPL HPAS GHGL Sbjct: 161 EAANGKPVLVAYWFKHDLIQIKSRF-KVREI-KTPRDIQDWNAGKIPLALIHPASAGHGL 218 Query: 124 NLQYGG 129 NLQ GG Sbjct: 219 NLQAGG 224 >gi|225405817|ref|ZP_03761006.1| hypothetical protein CLOSTASPAR_05038 [Clostridium asparagiforme DSM 15981] gi|225042657|gb|EEG52903.1| hypothetical protein CLOSTASPAR_05038 [Clostridium asparagiforme DSM 15981] Length = 459 Score = 113 bits (282), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 73/205 (35%), Positives = 115/205 (56%), Gaps = 13/205 (6%) Query: 1 MKQYHKFQRELYCDLQGE--NIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKA 58 + Y + +R++ +L + +I ++A+ + K LQLANGAVY DE++ E+H KI+A Sbjct: 254 LNAYTELERKMILELPEDESDISVTSAAALSNKLLQLANGAVY-DEDRTVHEIHGCKIEA 312 Query: 59 LEVIIEKANAAPIIVAYHFNSDLARLQKAFPQG----RTLDKDPCTIQEWNEGKIPLLFA 114 +IE P +V Y++ D R+ KA R L K P +WN KI +L Sbjct: 313 FLELIESLQGKPALVFYNYQHDRERILKALAGSKLRIRELKK-PQDEDDWNARKIDILLT 371 Query: 115 HPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQN 174 HPAS +GLNLQ GGN +++F L W+ E + Q +R+ RQ G V +++L+ Sbjct: 372 HPASSAYGLNLQQGGNHVIWFGLTWNYELYTQANKRL----HRQ-GQTEKVIIHHLVCSG 426 Query: 175 TIDELVLQRLRTKSTIQDLLLNALK 199 T DE V+Q L+ K +Q+ ++ +LK Sbjct: 427 TRDEDVMQALQRKDDVQNWVMESLK 451 >gi|227872572|ref|ZP_03990908.1| helicase [Oribacterium sinus F0268] gi|227841573|gb|EEJ51867.1| helicase [Oribacterium sinus F0268] Length = 449 Score = 112 bits (281), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 71/203 (34%), Positives = 112/203 (55%), Gaps = 11/203 (5%) Query: 1 MKQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 +K Y + ++ + L+ I A ++ T K Q ANGA+Y DE+K +HD K++ Sbjct: 248 LKAYQELEKNMVLSLEESEITAVSAGVLTNKLSQCANGAIY-DEDKVVNHIHDCKLERFT 306 Query: 61 VIIEKANAAPIIVAYHFNSDLARLQKAFPQG----RTLDKDPCTIQEWNEGKIPLLFAHP 116 ++E+ N +V Y+F D R+ KA + R K P ++WN+GKI +L AHP Sbjct: 307 ELVEELNGESALVFYNFKHDKDRILKALEKSGLEVREF-KSPKDEEDWNKGKIDILLAHP 365 Query: 117 ASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTI 176 AS +G+NLQYGG +++FSL W E + Q R+ RQ G ++ V V+ L+ +T+ Sbjct: 366 ASTAYGINLQYGGRNIIWFSLPWSYELYAQANARL--FRQ---GQEKPVIVHELLCTDTV 420 Query: 177 DELVLQRLRTKSTIQDLLLNALK 199 D + + L K Q+ +L ALK Sbjct: 421 DHDIKKSLSEKGQNQEDVLRALK 443 >gi|255994014|ref|ZP_05427149.1| SNF2 domain protein [Eubacterium saphenum ATCC 49989] gi|255993682|gb|EEU03771.1| SNF2 domain protein [Eubacterium saphenum ATCC 49989] Length = 467 Score = 112 bits (280), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 77/207 (37%), Positives = 116/207 (56%), Gaps = 18/207 (8%) Query: 2 KQYHKFQRELYCDLQ-------GENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDE 54 + Y KF+R C L+ ++ A +A + K LQLA GA+Y ++ K + VHD Sbjct: 260 RAYAKFERG--CVLRYLDDTDSASSVMASTAADLSGKLLQLAGGAIYQEDSKDYVTVHDT 317 Query: 55 KIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRT---LDKDPCTIQEWNEGKIPL 111 K+KAL ++E N II+ Y+F + ARL AF + + K I +WN GK+ + Sbjct: 318 KLKALTELVEPLNE-NIIIFYNFLHEKARLCNAFSDFKGEVRVFKSGKDIADWNAGKVNI 376 Query: 112 LFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLI 171 L AHPA+ G+GLNLQ GG +++F L E++ Q +R+ RQ G + VFV+ L+ Sbjct: 377 LIAHPAAMGYGLNLQQGGRRIIWFGLPQSYEQYAQANKRL----HRQ-GQQDKVFVHRLV 431 Query: 172 AQNTIDELVLQRLRTKSTIQDLLLNAL 198 + T DE VL L K ++Q LL++L Sbjct: 432 CKGTRDEDVLSALAHKDSMQKYLLSSL 458 >gi|325662084|ref|ZP_08150703.1| hypothetical protein HMPREF0490_01441 [Lachnospiraceae bacterium 4_1_37FAA] gi|325471747|gb|EGC74966.1| hypothetical protein HMPREF0490_01441 [Lachnospiraceae bacterium 4_1_37FAA] Length = 451 Score = 111 bits (277), Expect = 7e-23, Method: Compositional matrix adjust. Identities = 71/174 (40%), Positives = 97/174 (55%), Gaps = 13/174 (7%) Query: 31 KCLQLANGAVYYD--EEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAF 88 K Q+ANGA+Y D E H +HD K++ALE IIE A PI++ Y F DL R+ + Sbjct: 283 KLCQMANGAIYSDSGEAVH---IHDRKLEALEDIIEAAQG-PILLCYWFKHDLERITEKL 338 Query: 89 PQGRTLDKDPCT---IQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQ 145 Q + T I++WNEGK + HPAS GHGLNLQ+ N +V+F L W LE +Q Sbjct: 339 EQLKVFYSRIVTEENIRKWNEGKYDVGLIHPASAGHGLNLQHSSNHIVWFGLTWSLELYQ 398 Query: 146 QMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 Q R+ RQ + V V +++ TIDE +L L K Q L++A+K Sbjct: 399 QTNARLW----RQGQKQDTVVVQHIVTAGTIDEDILDALTHKDASQTRLIDAVK 448 >gi|268610658|ref|ZP_06144385.1| SNF2 domain-containing protein [Ruminococcus flavefaciens FD-1] Length = 417 Score = 106 bits (264), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 61/172 (35%), Positives = 98/172 (56%), Gaps = 7/172 (4%) Query: 1 MKQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 +K Y K ++E L +++ A N+A K +QLA+G VY D+ +H+ K+ ALE Sbjct: 249 IKAYRKLEKEYTLPLLHDDVSAANAAVLCGKLVQLASGCVY-DDGGTPSIIHNRKLDALE 307 Query: 61 VIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCG 120 ++E N P++VAY + + R++ F R + D I +WN+GKIP+ P+S G Sbjct: 308 DLLEAQNGKPVLVAYWYQHERERIKARF-DVREIKTDQ-DIADWNDGKIPVALIQPSSAG 365 Query: 121 HGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIA 172 HGLNLQ GG+ +++F++ W LE +QQ R+ RQ V +++L A Sbjct: 366 HGLNLQDGGSTIIWFTMPWSLELYQQTNARL----WRQGQNADTVVIHHLTA 413 >gi|269975285|gb|ACZ55509.1| helicase [Staphylococcus phage SA1] Length = 491 Score = 101 bits (252), Expect = 5e-20, Method: Compositional matrix adjust. Identities = 73/203 (35%), Positives = 105/203 (51%), Gaps = 27/203 (13%) Query: 20 IEAFNSASKTVKCLQLANGAVY-------YDEEKHWKE-----VHDEKIKALEVIIEKAN 67 IEA +AS K LQ+ +G +Y +++K K+ +HD K ALE ++E Sbjct: 273 IEAEQAASLQSKLLQMCSGFIYDTKIVGITEDDKVIKQKDTYRLHDLKFDALEELLETTL 332 Query: 68 AAP-IIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQ 126 A +++AYHF L RL++ F +D D I++WN GKI LL AHP S GHGLNLQ Sbjct: 333 ADKNVLIAYHFKPTLERLKERFKDLVVMDDDGKCIKKWNAGKIRLLAAHPQSAGHGLNLQ 392 Query: 127 YGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQ---------NTID 177 +GG+++V+ W LE Q R+ RQ G K V +Y A T D Sbjct: 393 HGGHVIVYIDNPWSLERFLQFNGRL----HRQ-GQKFPVTIYQFKAMLRTPNGLLAETAD 447 Query: 178 ELVLQRLRTKSTIQDLLLNALKK 200 ++V+Q L K +QD L++ Sbjct: 448 DVVIQALVEKEDVQDAFFALLER 470 >gi|323441318|gb|EGA98983.1| phage helicase [Staphylococcus aureus O46] Length = 128 Score = 95.1 bits (235), Expect = 5e-18, Method: Compositional matrix adjust. Identities = 53/125 (42%), Positives = 74/125 (59%), Gaps = 6/125 (4%) Query: 75 YHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVF 134 Y+F D R+ + F + TL+ D + WN G I LL AHPAS GHGLNLQ GG+I+V+ Sbjct: 3 YNFKHDKERILERFKEATTLE-DSNYKERWNSGNIKLLIAHPASAGHGLNLQQGGHIIVW 61 Query: 135 FSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 F L W LE +QQ R+ RQ G +++L+ NTID+ V + L+ K Q+ L Sbjct: 62 FGLTWSLELYQQANARL--YRQ---GQNHTTIIHHLMTDNTIDQRVYKALQNKELTQEEL 116 Query: 195 LNALK 199 + A+K Sbjct: 117 MKAIK 121 >gi|260549505|ref|ZP_05823723.1| conserved hypothetical protein [Acinetobacter sp. RUH2624] gi|260407298|gb|EEX00773.1| conserved hypothetical protein [Acinetobacter sp. RUH2624] Length = 72 Score = 93.6 bits (231), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 39/68 (57%), Positives = 58/68 (85%) Query: 133 VFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQD 192 +FFS WWDLE++QQ+IERIG TRQ QAG+ R V++Y++IA++T+DE+V++R +K +QD Sbjct: 1 MFFSHWWDLEQYQQIIERIGPTRQAQAGYDRPVYIYHIIAKDTMDEIVMERRESKREVQD 60 Query: 193 LLLNALKK 200 LL+ A+KK Sbjct: 61 LLMEAMKK 68 >gi|301321598|gb|ADK68988.1| Superfamily II DNA/RNA helicase, SNF2 family [Gordonia sp. KTR9] Length = 735 Score = 88.6 bits (218), Expect = 5e-16, Method: Composition-based stats. Identities = 64/211 (30%), Positives = 101/211 (47%), Gaps = 28/211 (13%) Query: 14 DLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWK--------------EVHDEKIKAL 59 D IEA N K LQ A GAVY D +K ++H K + Sbjct: 512 DASAHYIEAVNGGVLRNKLLQFAAGAVYIDLDKGADGYAKATSLTSRPTLQLHSAKFDKV 571 Query: 60 EVIIEKANA----APIIVAYHFNSD----LARLQKA-FPQGRTLDKDPCTIQEWNEGKIP 110 I ++ A +++AY F+ + + RL++A + R + P T + WN G+IP Sbjct: 572 IDICDQHFATGGDGSVLIAYRFDFEKTILIDRLRRAGYLGARAYNGMPDTKKAWNRGEIP 631 Query: 111 LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYL 170 ++ HPAS GHGLNLQ+GG+ L++ +L E + Q R+ + G + V V+ + Sbjct: 632 VMLVHPASAGHGLNLQFGGHTLIWTTLPDSNEHYGQTPARL-----NRLGQTKPVVVHTI 686 Query: 171 IAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 + +NTID + L K Q+ L+ A + E Sbjct: 687 LTENTIDMAMPGALSDKQASQERLMQATRSE 717 >gi|12719426|ref|NP_075497.1| hypothetical protein phiSLTp35 [Staphylococcus phage phiSLT] gi|12697856|dbj|BAB21728.1| unnamed protein product [Staphylococcus phage phiSLT] Length = 116 Score = 85.9 bits (211), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 47/107 (43%), Positives = 65/107 (60%), Gaps = 6/107 (5%) Query: 94 LDKDP-CTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIG 152 L+KD + WN G I LL AHPAS GHGLNLQ GG+I+V+F L W LE +QQ R+ Sbjct: 8 LEKDSKAKERRWNSGDIKLLIAHPASAGHGLNLQQGGHIIVWFGLTWSLELYQQANARL- 66 Query: 153 VTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 RQ G +++++ NTID+ V + L+ K Q+ L+ A+K Sbjct: 67 -YRQ---GQNHTTIIHHIMTDNTIDQKVYEALQNKELTQEELMKAIK 109 >gi|57651290|ref|YP_185255.1| hypothetical protein SACOL0363 [Staphylococcus aureus subsp. aureus COL] gi|57285476|gb|AAW37570.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus COL] Length = 116 Score = 85.5 bits (210), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 47/107 (43%), Positives = 65/107 (60%), Gaps = 6/107 (5%) Query: 94 LDKDP-CTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIG 152 L+KD + WN G I LL AHPAS GHGLNLQ GG+I+V+F L W LE +QQ R+ Sbjct: 8 LEKDSKAKERRWNSGDIKLLIAHPASAGHGLNLQQGGHIIVWFGLTWSLELYQQANARL- 66 Query: 153 VTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 RQ G +++++ NTID+ V + L+ K Q+ L+ A+K Sbjct: 67 -YRQ---GQNHTTIIHHIMTDNTIDQRVYKALQNKELTQEELMKAIK 109 >gi|42766595|gb|AAS45429.1| prophage-encoded helicase [Selenomonas ruminantium] Length = 126 Score = 85.5 bits (210), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 46/99 (46%), Positives = 61/99 (61%), Gaps = 5/99 (5%) Query: 101 IQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 I +WN GKIP+ HPAS GHGLNLQ GG+IL++FSL W LE +QQ R+ RQ G Sbjct: 25 IADWNAGKIPVALIHPASAGHGLNLQEGGSILIWFSLTWSLELYQQTNARL----YRQ-G 79 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 K V + ++ + TID V++ L K Q L+ A+K Sbjct: 80 QKDTVSIIHITTEGTIDGDVMKALERKDKTQTALIEAVK 118 >gi|19552947|ref|NP_600949.1| helicase [Corynebacterium glutamicum ATCC 13032] gi|62390624|ref|YP_226026.1| superfamily II DNA/RNA helicase [Corynebacterium glutamicum ATCC 13032] gi|21324512|dbj|BAB99136.1| Superfamily II DNA/RNA helicases, SNF2 family [Corynebacterium glutamicum ATCC 13032] gi|41325962|emb|CAF20125.1| Superfamily II DNA/RNA helicase [Corynebacterium glutamicum ATCC 13032] Length = 613 Score = 80.9 bits (198), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 67/237 (28%), Positives = 103/237 (43%), Gaps = 58/237 (24%) Query: 20 IEAFNSASKTVKCLQLANGAVYYDEEKHWKE----------------------------- 50 I A ++A+ +K LQ A GAVY D E + Sbjct: 382 ISAVHAATLRMKLLQYAGGAVYVDPEDSAQSQDLDASTARDVIDATNTAMTTITSRPTMI 441 Query: 51 VHDEKI-KALEVIIEKA------------------NAAPIIVAYHFNSD----LARLQKA 87 VH K+ K +E++ A P +VAY F SD L L +A Sbjct: 442 VHLHKVRKVIEILCNPALGGEPVNIDQDETGKQVYTPTPTLVAYRFISDKEILLHYLAQA 501 Query: 88 FPQG-RTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 QG D P + WN G+IP+L PAS GHGLN Q+GG+ LV+++L + E + Q Sbjct: 502 GVQGVEVFDGSPDMLSRWNAGRIPVLLLQPASAGHGLNFQHGGHRLVWYNLPDNNEHYMQ 561 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETI 203 R+ + G K V ++ +I +T D + L K+ Q L++A++++ + Sbjct: 562 ANARL-----HRIGQKNPVTIHRIITADTYDANMPAILAGKANRQQRLIDAVRRDPV 613 >gi|71274979|ref|ZP_00651267.1| hypothetical protein XfasaDRAFT_2287 [Xylella fastidiosa Dixon] gi|71898395|ref|ZP_00680568.1| hypothetical protein XfasoDRAFT_3433 [Xylella fastidiosa Ann-1] gi|71164711|gb|EAO14425.1| hypothetical protein XfasaDRAFT_2287 [Xylella fastidiosa Dixon] gi|71731918|gb|EAO33976.1| hypothetical protein XfasoDRAFT_3433 [Xylella fastidiosa Ann-1] Length = 104 Score = 78.2 bits (191), Expect = 6e-13, Method: Compositional matrix adjust. Identities = 34/67 (50%), Positives = 49/67 (73%) Query: 134 FFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDL 193 + DLE +QQ++ERIG TRQ QAG KR VF+++++A T+DELV+ R +K +QDL Sbjct: 23 LCPVHGDLEHYQQIVERIGPTRQAQAGHKRPVFIHHIVAAGTVDELVMARRESKREVQDL 82 Query: 194 LLNALKK 200 LL A+K+ Sbjct: 83 LLEAVKR 89 >gi|290466810|gb|ADD25740.1| putative helicase [Lactococcus phage 1358] Length = 577 Score = 69.3 bits (168), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 61/188 (32%), Positives = 92/188 (48%), Gaps = 29/188 (15%) Query: 34 QLANGAVY-------YDEEK-------HWK-----EVHDEKIKALEVIIEKANAAPIIVA 74 QLA+GA+Y DEE+ H K EVHD K+ AL IIE+ + V Sbjct: 346 QLASGAIYEQLDTTGLDEEEIAERYNEHMKNRKHIEVHDAKLDALADIIEREQD-NVFVF 404 Query: 75 YHFNSDLARLQKAFPQGRTLDKDPCT--IQEWNEGKIPLLFAHPASCGHGLNLQYGGNIL 132 + + R+++ F R L+ + WN GKIP+L A+PAS GLN+Q GG+ + Sbjct: 405 VSYKHEAERIRQRFEGVRFLNTANAAEVLPLWNAGKIPVLVANPASTKFGLNMQDGGHTI 464 Query: 133 VFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIA--QNTIDELVLQRLRTKSTI 190 V++S+ + E Q R+ RQ G K V VY L + D+ L+ + TI Sbjct: 465 VWYSMGYSFEAFTQSNARLA--RQ---GQKHEVKVYMLQSWLAPIQDDTQLEDIMRAQTI 519 Query: 191 QDLLLNAL 198 +++A+ Sbjct: 520 DSAIMDAI 527 >gi|256544992|ref|ZP_05472360.1| SNF2 family prophage LambdaSa04, helicase [Anaerococcus vaginalis ATCC 51170] gi|256399288|gb|EEU12897.1| SNF2 family prophage LambdaSa04, helicase [Anaerococcus vaginalis ATCC 51170] Length = 78 Score = 68.2 bits (165), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 33/75 (44%), Positives = 53/75 (70%), Gaps = 1/75 (1%) Query: 11 LYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAP 70 + ++ ++I+A NSA+ + K LQ+A+G+VY DE+K+ +HD KI ALE +IE AN P Sbjct: 1 MVVSIKEKDIDAVNSAALSNKLLQMASGSVY-DEDKNMIRIHDRKIDALENLIEGANGKP 59 Query: 71 IIVAYHFNSDLARLQ 85 + +AY + SDL R++ Sbjct: 60 VPIAYWYKSDLKRIK 74 >gi|125974159|ref|YP_001038069.1| SNF2-related protein [Clostridium thermocellum ATCC 27405] gi|125714384|gb|ABN52876.1| SNF2-related protein [Clostridium thermocellum ATCC 27405] Length = 452 Score = 62.8 bits (151), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 49/211 (23%), Positives = 96/211 (45%), Gaps = 17/211 (8%) Query: 1 MKQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 +K+Y + ++ Y +L + A N ++ ++ QL G + D+ ++V D K+KALE Sbjct: 233 LKKYKELVKQSYTELSAGEVTATNILTRLLRLSQLTGGFIGSDDGGKIEQVSDAKLKALE 292 Query: 61 VIIEKA--NAAPIIVAYHFNSDLARLQKAFPQ---------GRTLDKDPCTIQEWNEGKI 109 I+E + ++V F ++ + + + G T D+ + + Sbjct: 293 DILESSIQEGHKLVVIARFIPEIHAICRLLEKKNIGYACIYGATKDRQEQVNRFQYDPDC 352 Query: 110 PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYY 169 + A+ G G+ L + +VF+SL + + +Q RI + G K Y Sbjct: 353 MVFVGQIATAGLGITLT-AASTMVFYSLDYSMSNFEQTKARI-----HRVGQKNGCTYIY 406 Query: 170 LIAQNTIDELVLQRLRTKSTIQDLLLNALKK 200 LIA+ T+D +L LR K+ + +L++ +K Sbjct: 407 LIAKGTVDSKILTALRNKADLAKMLIDDYRK 437 >gi|223986447|ref|ZP_03636451.1| hypothetical protein HOLDEFILI_03763 [Holdemania filiformis DSM 12042] gi|223961599|gb|EEF66107.1| hypothetical protein HOLDEFILI_03763 [Holdemania filiformis DSM 12042] Length = 471 Score = 62.0 bits (149), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 48/207 (23%), Positives = 94/207 (45%), Gaps = 17/207 (8%) Query: 1 MKQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 MK Y E + +L + A N ++ ++ QL G + D+ ++V + K+ LE Sbjct: 261 MKLYKNLVDESFAELSDGEVTATNVLTRLLRLNQLTGGFICSDDSSKAEQVSNAKMSVLE 320 Query: 61 VIIEKA--NAAPIIVAYHFNSDLARLQKAFPQ---------GRTLDKDPCTIQEWNEGKI 109 I++ + +++ F +L + K + G ++D Q N+ ++ Sbjct: 321 DIVDASLQEGKKLVIIARFIPELHAICKMLGKKGIRHSLIMGGVNNRDEQVAQFQNDPEV 380 Query: 110 PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYY 169 + A+ G G+ L + +VF+SL + + +Q RI +AG K Y Sbjct: 381 SVFVGQIATAGMGITLT-AASTMVFYSLDYSMSNFEQTKARI-----HRAGQKFPCTYLY 434 Query: 170 LIAQNTIDELVLQRLRTKSTIQDLLLN 196 L A+ TID VL+ L++K+++ L++ Sbjct: 435 LTAEGTIDTKVLKALKSKASLAKTLVD 461 >gi|315926199|ref|ZP_07922399.1| snf2 family helicase [Pseudoramibacter alactolyticus ATCC 23263] gi|315620643|gb|EFV00624.1| snf2 family helicase [Pseudoramibacter alactolyticus ATCC 23263] Length = 478 Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 47/211 (22%), Positives = 96/211 (45%), Gaps = 17/211 (8%) Query: 1 MKQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 +K Y+ + + +L+ + + N +K ++ QL G + DE ++V K+ LE Sbjct: 268 LKLYYSLVEDSFAELEEDEVTTTNILTKLLRLSQLTGGFISGDESDVPEQVSTAKLSVLE 327 Query: 61 VIIEKA--NAAPIIVAYHFNSDL---------ARLQKAFPQGRTLDKDPCTIQEWNEGKI 109 II+ A +++ F +L + + G +++ Q N+ + Sbjct: 328 DIIDSAADEGRKLVIIARFVPELHAICSLLDKKGINHSLIMGGVKNREEQISQFQNDPDV 387 Query: 110 PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYY 169 + A+ G G+ L + +VF+SL + + ++Q RI +AG K + Sbjct: 388 TVFVGQIATAGLGITLT-ASSTMVFYSLDYSMSTYEQTKARI-----HRAGQKYPCTYIH 441 Query: 170 LIAQNTIDELVLQRLRTKSTIQDLLLNALKK 200 LIA T+D+ VL+ LR+K+ + L++ ++ Sbjct: 442 LIADGTVDQKVLRALRSKANLAKTLVDDYRR 472 >gi|325270384|ref|ZP_08136989.1| helicase [Prevotella multiformis DSM 16608] gi|324987328|gb|EGC19306.1| helicase [Prevotella multiformis DSM 16608] Length = 1326 Score = 59.3 bits (142), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 55/207 (26%), Positives = 93/207 (44%), Gaps = 21/207 (10%) Query: 1 MKQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 M Y +RE ++ + ++ ++ + Q+A D + WK + K+ A Sbjct: 1107 MAMYEVRRRETEEKVRANAADKVSTLAEITRLRQMACSCSLVD--RKWK-LPSSKVLAFI 1163 Query: 61 VIIEKANAAP--IIVAYHFNSDLARLQKAFPQGRT--LDKDPCT--------IQEWNEGK 108 + E N + +V F S L +++A + R L D T +Q++ G+ Sbjct: 1164 DLAESLNDSGNRALVFSQFTSFLDEVRRAMDKARLPYLYLDGSTPMAQREKLVQDFQTGR 1223 Query: 109 IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVY 168 P + G GLNL G N ++ WW+ IE+ R + G K+ V VY Sbjct: 1224 CPFFLISLKAGGLGLNLT-GANYVIHLDPWWN-----PAIEQQATDRAYRIGQKQEVTVY 1277 Query: 169 YLIAQNTIDELVLQRLRTKSTIQDLLL 195 +LI+Q+TI+E +L+ RTK + D LL Sbjct: 1278 HLISQHTIEEKILRLHRTKRNLSDSLL 1304 >gi|309702945|emb|CBJ02276.1| putative phage protein [Escherichia coli ETEC H10407] Length = 286 Score = 57.8 bits (138), Expect = 9e-07, Method: Compositional matrix adjust. Identities = 23/43 (53%), Positives = 36/43 (83%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDE 44 +QY + ++E++ +L GE IEA N+A+KT+KCLQ+A+GAVY D+ Sbjct: 241 QQYREMEKEMFLELNGEGIEAPNAAAKTLKCLQIASGAVYTDD 283 >gi|307580244|gb|ADN64213.1| SNF2-related protein [Xylella fastidiosa subsp. fastidiosa GB514] Length = 330 Score = 55.5 bits (132), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 25/53 (47%), Positives = 39/53 (73%), Gaps = 2/53 (3%) Query: 2 KQYHKFQRELYCDLQ-GENIEAFNSASKTVKCLQLANGAVYYDEEKH-WKEVH 52 + Y +++++ L+ G +EAFN+ASKT+KCLQLANGA+Y D+ + W+ VH Sbjct: 257 RLYKAMEQDMFIALECGAEVEAFNAASKTIKCLQLANGALYTDDTRQAWEVVH 309 >gi|302345308|ref|YP_003813661.1| SNF2 family N-terminal domain protein [Prevotella melaninogenica ATCC 25845] gi|302150135|gb|ADK96397.1| SNF2 family N-terminal domain protein [Prevotella melaninogenica ATCC 25845] Length = 1343 Score = 54.7 bits (130), Expect = 7e-06, Method: Compositional matrix adjust. Identities = 33/95 (34%), Positives = 51/95 (53%), Gaps = 6/95 (6%) Query: 101 IQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 ++E+ GK P + G GLNL G N +V WW+ IE+ R + G Sbjct: 1233 VKEFQTGKCPFFLISLKAGGLGLNLT-GANYVVHLDPWWN-----PAIEQQATDRAYRIG 1286 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 ++ V VY+LI+Q+TI+E +L+ +TK + D LL Sbjct: 1287 QQQDVTVYHLISQHTIEEKILRLHKTKRNLSDSLL 1321 >gi|325853079|ref|ZP_08171228.1| SNF2 family N-terminal domain protein [Prevotella denticola CRIS 18C-A] gi|325484453|gb|EGC87374.1| SNF2 family N-terminal domain protein [Prevotella denticola CRIS 18C-A] Length = 1302 Score = 54.7 bits (130), Expect = 7e-06, Method: Compositional matrix adjust. Identities = 32/95 (33%), Positives = 51/95 (53%), Gaps = 6/95 (6%) Query: 101 IQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 ++++ GK P + G GLNL G N ++ WW+ IE+ R + G Sbjct: 1192 VKDFQTGKCPFFLISLKAGGLGLNLT-GANYVIHLDPWWN-----PAIEQQATDRAYRIG 1245 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 K+ V VY+LI+Q+TI+E +L+ +TK + D LL Sbjct: 1246 QKQNVTVYHLISQHTIEEKILRLHKTKRNLSDSLL 1280 >gi|288802766|ref|ZP_06408204.1| SNF2/helicase domain protein [Prevotella melaninogenica D18] gi|288334916|gb|EFC73353.1| SNF2/helicase domain protein [Prevotella melaninogenica D18] Length = 1343 Score = 54.7 bits (130), Expect = 7e-06, Method: Compositional matrix adjust. Identities = 55/207 (26%), Positives = 89/207 (42%), Gaps = 21/207 (10%) Query: 1 MKQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 M Y +RE + + ++ ++ Q+A D K WK + K+ A Sbjct: 1124 MAMYEVKRRETEAKILENKADKVSTLAEITHLRQMACSCSLVD--KRWK-LPSSKVLAFI 1180 Query: 61 VIIEKANAAP--IIVAYHFNSDLARLQKAFPQGRT----LD-KDPCT-----IQEWNEGK 108 + E N + +V F S ++KA + LD P + ++E+ GK Sbjct: 1181 DLAESLNDSGNRALVFSQFTSFFEEIKKAMETAKLPYLYLDGSTPMSMREKLVKEFQSGK 1240 Query: 109 IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVY 168 P + G GLNL G N ++ WW+ IE+ R + G K+ V VY Sbjct: 1241 CPFFLISLKAGGLGLNLT-GANYVIHLDPWWN-----PAIEQQATDRAYRIGQKQDVTVY 1294 Query: 169 YLIAQNTIDELVLQRLRTKSTIQDLLL 195 LI+Q+TI+E +L+ +TK + D LL Sbjct: 1295 RLISQHTIEEKILRLHKTKRNLSDSLL 1321 >gi|327313991|ref|YP_004329428.1| SNF2 family N-terminal domain-containing protein [Prevotella denticola F0289] gi|326946179|gb|AEA22064.1| SNF2 family N-terminal domain protein [Prevotella denticola F0289] Length = 1340 Score = 54.7 bits (130), Expect = 7e-06, Method: Compositional matrix adjust. Identities = 32/95 (33%), Positives = 51/95 (53%), Gaps = 6/95 (6%) Query: 101 IQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 ++++ GK P + G GLNL G N ++ WW+ IE+ R + G Sbjct: 1230 VKDFQTGKCPFFLISLKAGGLGLNLT-GANYVIHLDPWWN-----PAIEQQATDRAYRIG 1283 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 K+ V VY+LI+Q+TI+E +L+ +TK + D LL Sbjct: 1284 QKQNVTVYHLISQHTIEEKILRLHKTKRNLSDSLL 1318 >gi|303238092|ref|ZP_07324632.1| SNF2 family N-terminal domain protein [Prevotella disiens FB035-09AN] gi|302481727|gb|EFL44782.1| SNF2 family N-terminal domain protein [Prevotella disiens FB035-09AN] Length = 1337 Score = 54.7 bits (130), Expect = 8e-06, Method: Compositional matrix adjust. Identities = 52/187 (27%), Positives = 84/187 (44%), Gaps = 23/187 (12%) Query: 22 AFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEK---IKALEVIIEKANAAPIIVAYHFN 78 + ++ ++ + QLA D K W+ V + I E + + N A +V F Sbjct: 1140 SVSTLAEITRLRQLACSTALVD--KKWEGVSSKTLAFIDLAESLNDSGNRA--LVFSQFT 1195 Query: 79 SDLARLQKAFPQ---------GRT-LDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYG 128 S A ++K + G T + K ++E+ EG P + G GLNL G Sbjct: 1196 SYFAEIKKMMDKTHLPYLYLDGSTPMKKREQLVREFQEGDCPFFLISLKAGGLGLNLT-G 1254 Query: 129 GNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKS 188 N ++ WW+ IE+ R + G ++ V VY LIAQ+TI+E +L+ +TK Sbjct: 1255 ANYVIHLDPWWN-----PAIEQQATDRAYRIGQEQDVTVYRLIAQHTIEEKILRLHKTKR 1309 Query: 189 TIQDLLL 195 + D LL Sbjct: 1310 DLADSLL 1316 >gi|66392086|ref|YP_239310.1| possible DNA helicase [Xanthomonas phage Xp15] gi|62529196|gb|AAX84879.1| possible DNA helicase [Xanthomonas phage Xp15] Length = 587 Score = 53.5 bits (127), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 61/205 (29%), Positives = 93/205 (45%), Gaps = 20/205 (9%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEV 61 K Y K + +L + + I A N+A K +K LQ+A+GAV DE + K + AL Sbjct: 382 KMYEKMKSDLLVEYEAGEITAVNAAVKAMKLLQIASGAVKDDEGRIVKVDASTREDALWE 441 Query: 62 IIEKANAAPIIVAYHFNSDLARLQKAFPQGR-----TLDKD-PCT-----IQEWNEGKIP 110 I E +++ F + + L F Q R T++ D P +Q++ + + Sbjct: 442 IFEGTGETKLVIFAAFRATIDHLVGYF-QDRNVKVATINGDVPHALRAKHVQDFQDSDLQ 500 Query: 111 LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYL 170 +L P S HG+ L I V++SL E + Q RI +AG R +Y+L Sbjct: 501 VLIIQPQSSAHGITLTASCTI-VWYSLVPSGEIYVQANGRI-----TRAGQSRKQTIYHL 554 Query: 171 IAQNTIDELVLQRLRTK-STIQDLL 194 I + VL L K ST Q+LL Sbjct: 555 IGCRP-ERHVLDILEGKVSTSQNLL 578 >gi|323340857|ref|ZP_08081108.1| SWF/SNF family helicase [Lactobacillus ruminis ATCC 25644] gi|323091708|gb|EFZ34329.1| SWF/SNF family helicase [Lactobacillus ruminis ATCC 25644] Length = 975 Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 38/137 (27%), Positives = 65/137 (47%), Gaps = 16/137 (11%) Query: 71 IIVAYHFNSDLARLQKAFPQ---------GRTLDKDPC-TIQEWNEGKIPLLFAHPASCG 120 IIV F S L+ L+K Q G T ++ ++E+N+ +P+ + G Sbjct: 828 IIVFSQFVSMLSILEKKLKQRKIEFYKIVGETPKEERFKMVEEFNQNDVPIFLISLKAGG 887 Query: 121 HGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELV 180 GLNL G ++++ + WW+ Q R + G + V VY LI ++TI+E + Sbjct: 888 TGLNL-VGADVIIHYDPWWNEAAQNQ-----ATDRAHRIGQTKNVLVYKLIVKDTIEEKI 941 Query: 181 LQRLRTKSTIQDLLLNA 197 L+ KS + D +L+ Sbjct: 942 LKMQEQKSKLADDILSG 958 >gi|160944098|ref|ZP_02091328.1| hypothetical protein FAEPRAM212_01600 [Faecalibacterium prausnitzii M21/2] gi|158444774|gb|EDP21778.1| hypothetical protein FAEPRAM212_01600 [Faecalibacterium prausnitzii M21/2] Length = 562 Score = 52.4 bits (124), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 47/213 (22%), Positives = 97/213 (45%), Gaps = 25/213 (11%) Query: 2 KQYHKFQRELYCDL-QGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 K Y + +R + +L G++I A +K ++ +QL G D+ ++V+ K+ ALE Sbjct: 353 KLYEQLRRSSFAELDSGDSITATTVLTKMLRLMQLTGGFTQTDDGTRPQQVNTAKLDALE 412 Query: 61 VIIEK---ANAAPIIVAYHFNSDLARLQ-----KAFPQGRTLDKDPCT--------IQEW 104 I++ + +++ F +++A ++ K P G P Q+ Sbjct: 413 DILDDYVLETGSKLVIFARFRAEIAAIENALRKKGIPYGSIYGDVPQAERGKIVDDFQQN 472 Query: 105 NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA 164 E K+ A + G G+ L + ++ VF+S+ ++ + Q + RI + G Sbjct: 473 PEAKV--FVAQIQTAGLGITL-HAASMAVFYSIDYNYANYAQALARI-----HRIGQHNP 524 Query: 165 VFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 V +L+ +++ID+ VL L K I ++++ Sbjct: 525 VTYIHLLVEDSIDDKVLAALENKEDIAKSIVDS 557 >gi|283795073|ref|ZP_06344226.1| Snf2 family protein [Clostridium sp. M62/1] gi|291077403|gb|EFE14767.1| Snf2 family protein [Clostridium sp. M62/1] Length = 254 Score = 52.0 bits (123), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 28/96 (29%), Positives = 50/96 (52%), Gaps = 6/96 (6%) Query: 102 QEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGF 161 +++N G +P+ + G GLNL +I++ F WW+L Q R + G Sbjct: 146 EQFNSGDVPVFLISLKAGGTGLNL-TAASIVIHFDPWWNLAAQNQ-----ATDRAHRIGQ 199 Query: 162 KRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 ++ V V+ LIAQNTI+E +++ + K + +L+ Sbjct: 200 EKQVTVFKLIAQNTIEEKIIKLQQEKQKLSSQILDG 235 >gi|295092105|emb|CBK78212.1| Superfamily II DNA/RNA helicases, SNF2 family [Clostridium cf. saccharolyticum K10] Length = 1085 Score = 51.6 bits (122), Expect = 6e-05, Method: Compositional matrix adjust. Identities = 28/96 (29%), Positives = 51/96 (53%), Gaps = 6/96 (6%) Query: 102 QEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGF 161 +++N G +P+ + G GLNL +I++ F WW+L Q +R + G Sbjct: 977 EQFNSGDVPVFLISLKAGGTGLNLT-AASIVIHFDPWWNLAAQNQATDRA-----HRIGQ 1030 Query: 162 KRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 ++ V V+ LIAQNTI+E +++ + K + +L+ Sbjct: 1031 EKQVTVFKLIAQNTIEEKIIKLQQEKQKLSSQILDG 1066 >gi|255038325|ref|YP_003088946.1| Non-specific serine/threonine protein kinase [Dyadobacter fermentans DSM 18053] gi|254951081|gb|ACT95781.1| Non-specific serine/threonine protein kinase [Dyadobacter fermentans DSM 18053] Length = 982 Score = 51.2 bits (121), Expect = 8e-05, Method: Compositional matrix adjust. Identities = 52/219 (23%), Positives = 85/219 (38%), Gaps = 39/219 (17%) Query: 12 YCDLQGENIEAFNSASKTVKCL-------------------------QLANGAVYYDEE- 45 YCD+ GE +A+ A + L QLAN V D E Sbjct: 752 YCDMSGEQEKAYEEAKAYYRNLILQSIDSEGMSKSQLVVLQGLTRLRQLANHPVMVDPEY 811 Query: 46 KHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLAR-------LQKAFPQGRTLDKDP 98 H ++ + L+ ++ + + I Y + DL R + A+ G T D+ Sbjct: 812 AHDSGKFEDVLYKLQTVMSEDHKILIFSQYIKHLDLFRHYLDEKEINYAYLDGATRDRQE 871 Query: 99 CTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQ 158 N+ I + + G GLNL + + WW+ IE V R + Sbjct: 872 QVESFQNDENIKIFLISLKAGGLGLNLTAADYVFIL-DPWWN-----PAIEAQAVDRAHR 925 Query: 159 AGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 G R VF Y I +N+++E +L R+K + D L+++ Sbjct: 926 IGQDRTVFTYKFITKNSVEEKILALQRSKKQLADDLISS 964 >gi|282880921|ref|ZP_06289612.1| SNF2 family N-terminal domain protein [Prevotella timonensis CRIS 5C-B1] gi|281305144|gb|EFA97213.1| SNF2 family N-terminal domain protein [Prevotella timonensis CRIS 5C-B1] Length = 1254 Score = 51.2 bits (121), Expect = 9e-05, Method: Compositional matrix adjust. Identities = 49/185 (26%), Positives = 80/185 (43%), Gaps = 21/185 (11%) Query: 23 FNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKAN--AAPIIVAYHFNSD 80 ++ S+ K Q+A D K WK+ K+ + E N +V F S Sbjct: 1058 LSTLSEITKLRQMACSISLVD--KTWKKT-SSKLSTFIALAESLNDSGGRALVFSQFTSF 1114 Query: 81 LARLQKAFPQ---------GRT-LDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGN 130 LA +++ + G T + K + E+ +G P + G GLNL N Sbjct: 1115 LAEVRQVMDKIKLPYLYLDGATPIKKREEIVDEFQKGNYPFFLISLKAGGLGLNLT-AAN 1173 Query: 131 ILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 ++ WW+ IE+ R + G + V VY+LIAQ+TI+E +++ +TK + Sbjct: 1174 YVIHLDPWWN-----PAIEQQATDRAYRIGQRNDVTVYHLIAQHTIEEKIIRLHKTKRDL 1228 Query: 191 QDLLL 195 D LL Sbjct: 1229 ADSLL 1233 >gi|295103966|emb|CBL01510.1| Superfamily II DNA/RNA helicases, SNF2 family [Faecalibacterium prausnitzii SL3/3] Length = 1098 Score = 51.2 bits (121), Expect = 9e-05, Method: Compositional matrix adjust. Identities = 46/184 (25%), Positives = 86/184 (46%), Gaps = 21/184 (11%) Query: 9 RELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANA 68 RE+ CD + S++K CL+L AV H + + LE++ ++ + Sbjct: 910 REICCDPRLVADNWTGSSAKLEACLELVTEAV---AGGHRILLFSQFTSMLELLAKRLDE 966 Query: 69 APIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYG 128 A + HF LQ + P+ ++ ++ +N+G+ + + G GLNL Sbjct: 967 AGV---SHFT-----LQGSTPKPVRAEQ----VRRFNQGEADVFLISLRAGGTGLNLT-A 1013 Query: 129 GNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKS 188 +I++ + WW+L Q +R + G + V VY LIAQ+TI+E +++ + K Sbjct: 1014 ADIVIHYDPWWNLAAQNQATDRA-----YRIGQRNPVQVYRLIAQDTIEEKIVELQQAKQ 1068 Query: 189 TIQD 192 ++ D Sbjct: 1069 SLAD 1072 >gi|160942559|ref|ZP_02089806.1| hypothetical protein FAEPRAM212_00034 [Faecalibacterium prausnitzii M21/2] gi|158446143|gb|EDP23146.1| hypothetical protein FAEPRAM212_00034 [Faecalibacterium prausnitzii M21/2] Length = 1098 Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 46/184 (25%), Positives = 86/184 (46%), Gaps = 21/184 (11%) Query: 9 RELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANA 68 RE+ CD + S++K CL+L AV H + + LE++ ++ + Sbjct: 910 REICCDPRLVADNWTGSSAKLDACLELVTEAV---AGGHRILLFSQFTSMLELLAKRLDE 966 Query: 69 APIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYG 128 A + HF LQ + P+ ++ ++ +N+G+ + + G GLNL Sbjct: 967 AGV---SHFT-----LQGSTPKPVRAEQ----VRRFNQGEADVFLISLRAGGTGLNLT-A 1013 Query: 129 GNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKS 188 +I++ + WW+L Q +R + G + V VY LIAQ+TI+E +++ + K Sbjct: 1014 ADIVIHYDPWWNLAAQNQATDRA-----YRIGQRNPVQVYRLIAQDTIEEKIVELQQAKQ 1068 Query: 189 TIQD 192 ++ D Sbjct: 1069 SLAD 1072 >gi|168335382|ref|ZP_02693475.1| Non-specific serine/threonine protein kinase [Epulopiscium sp. 'N.t. morphotype B'] Length = 1031 Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 29/96 (30%), Positives = 51/96 (53%), Gaps = 6/96 (6%) Query: 101 IQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 ++E+NEG + + + G GLNL +I++ + WW+L Q R + G Sbjct: 923 VEEFNEGDMQVFLISLKAGGVGLNLT-AADIVIHYDPWWNLSAQNQ-----ATDRAYRMG 976 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 K V V+ LIA+NTI+E + Q +K+ + + +L+ Sbjct: 977 QKNTVQVFKLIAKNTIEEKIKQLQDSKALLSESILS 1012 >gi|291520743|emb|CBK79036.1| Superfamily II DNA/RNA helicases, SNF2 family [Coprococcus catus GD/7] Length = 1096 Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 29/96 (30%), Positives = 48/96 (50%), Gaps = 6/96 (6%) Query: 101 IQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 + +NE IP+ + G GLNL G +I++ + WW+ Q +R + G Sbjct: 988 VNAFNENAIPVFLISLKAGGTGLNLT-GADIVIHYDPWWNAAAQNQATDR-----AHRIG 1041 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 V VY LIA++TI+E +L+ K + D +L+ Sbjct: 1042 QTHTVTVYKLIARHTIEEKILELQENKKALSDQILS 1077 >gi|300743764|ref|ZP_07072784.1| SNF2/helicase domain protein [Rothia dentocariosa M567] gi|300380125|gb|EFJ76688.1| SNF2/helicase domain protein [Rothia dentocariosa M567] Length = 1318 Score = 50.8 bits (120), Expect = 1e-04, Method: Composition-based stats. Identities = 29/99 (29%), Positives = 51/99 (51%), Gaps = 6/99 (6%) Query: 98 PCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 P ++++ EG P+ + G GLNL + + WW+ QQ ++RI Sbjct: 1203 PQVLKDFAEGTAPVFLISLKAGGFGLNLTEADHCFIM-DPWWNPAAEQQAVDRI-----H 1256 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + G +R V VY L+A+ TI+E V+ +K+ + D ++N Sbjct: 1257 RLGQERDVHVYRLVAEGTIEEKVMDLKASKAALFDAVVN 1295 >gi|311113008|ref|YP_003984230.1| hypothetical protein HMPREF0733_11339 [Rothia dentocariosa ATCC 17931] gi|310944502|gb|ADP40796.1| conserved hypothetical protein [Rothia dentocariosa ATCC 17931] Length = 1319 Score = 50.4 bits (119), Expect = 1e-04, Method: Composition-based stats. Identities = 29/99 (29%), Positives = 51/99 (51%), Gaps = 6/99 (6%) Query: 98 PCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 P ++++ EG P+ + G GLNL + + WW+ QQ ++RI Sbjct: 1204 PQVLKDFAEGAAPVFLISLKAGGFGLNLTEADHCFIM-DPWWNPAAEQQAVDRI-----H 1257 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + G +R V VY L+A+ TI+E V+ +K+ + D ++N Sbjct: 1258 RLGQERDVHVYRLVAEGTIEEKVMDLKASKAALFDAVVN 1296 >gi|295102130|emb|CBK99675.1| Superfamily II DNA/RNA helicases, SNF2 family [Faecalibacterium prausnitzii L2-6] Length = 1109 Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 48/186 (25%), Positives = 88/186 (47%), Gaps = 25/186 (13%) Query: 9 RELYCD--LQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKA 66 RE+ CD L +N E ++K C +L + AV E H + + LE++ ++ Sbjct: 920 REICCDPRLIADNWEG--GSAKLDACAELVSSAV---EGGHRILLFSQFTSMLELLAKRL 974 Query: 67 NAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQ 126 +A I HF LQ + P+ + ++ +N G++ + + G GLNL Sbjct: 975 DAEGI---SHFT-----LQGSTPKPVRAE----LVRRFNGGEVSVFLISLRAGGTGLNLT 1022 Query: 127 YGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRT 186 +I++ + WW++ Q +R + G + V VY LIAQ+TI+E +++ + Sbjct: 1023 -AADIVIHYDPWWNVAAQNQATDRA-----YRIGQQNPVQVYKLIAQDTIEEKIVELQQA 1076 Query: 187 KSTIQD 192 K ++ D Sbjct: 1077 KQSLAD 1082 >gi|238917469|ref|YP_002930986.1| hypothetical protein EUBELI_01547 [Eubacterium eligens ATCC 27750] gi|238872829|gb|ACR72539.1| Hypothetical protein EUBELI_01547 [Eubacterium eligens ATCC 27750] Length = 69 Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 25/52 (48%), Positives = 35/52 (67%), Gaps = 1/52 (1%) Query: 37 NGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAF 88 NGA+Y D + E HD K+ ALE IIE +N P++VAY F DL+R+++ F Sbjct: 14 NGAIYSDTGE-IIEFHDRKLDALEDIIESSNGKPVLVAYWFKHDLSRIKERF 64 >gi|331218680|ref|XP_003322017.1| helicase SWR1 [Puccinia graminis f. sp. tritici CRL 75-36-700-3] gi|309301007|gb|EFP77598.1| helicase SWR1 [Puccinia graminis f. sp. tritici CRL 75-36-700-3] Length = 1764 Score = 50.1 bits (118), Expect = 2e-04, Method: Composition-based stats. Identities = 31/98 (31%), Positives = 51/98 (52%), Gaps = 7/98 (7%) Query: 101 IQEW-NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQA 159 + +W N +I + + G G+NL + ++F+ W+ QQ ++R + Sbjct: 1486 VMDWQNRPEIFIFLLSTRAGGLGINLT-AADTVIFYDCDWNPSNDQQAMDR-----AHRL 1539 Query: 160 GFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 G KR V VY LI TIDE +L+ RTK T+QD ++ + Sbjct: 1540 GQKRQVTVYRLITTGTIDERILKLARTKKTVQDAVVGS 1577 >gi|288958707|ref|YP_003449048.1| hypothetical protein AZL_018660 [Azospirillum sp. B510] gi|288911015|dbj|BAI72504.1| hypothetical protein AZL_018660 [Azospirillum sp. B510] Length = 1160 Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats. Identities = 29/100 (29%), Positives = 49/100 (49%), Gaps = 7/100 (7%) Query: 91 GRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 GRTLD+ + + ++P+ + G GLNL + ++ + WW+ Q +R Sbjct: 1039 GRTLDR-ALPVNRFQNREVPVFLISLKAGGRGLNLT-AADTVIHYDPWWNPAAEDQATDR 1096 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 + G + VFVY LIA NT++E +L R K ++ Sbjct: 1097 -----AYRIGQDKPVFVYKLIAANTVEERILDLQRRKGSL 1131 >gi|167630922|ref|YP_001681421.1| snf2 family helicase [Heliobacterium modesticaldum Ice1] gi|167593662|gb|ABZ85410.1| snf2 family helicase [Heliobacterium modesticaldum Ice1] Length = 449 Score = 49.7 bits (117), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 52/207 (25%), Positives = 92/207 (44%), Gaps = 17/207 (8%) Query: 1 MKQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 MK Y R+ Y +L + A N ++ ++ Q+ G + E + V K +ALE Sbjct: 233 MKIYRDLVRDSYAELGKGEVTATNILTRLLRLSQITGGFIGGGEGGPVQRVSTAKEEALE 292 Query: 61 VIIE---KANAAPIIVAY---HFNSDLARLQK-----AFPQGRTLDKDPCTIQEWNEGKI 109 IIE ++ +I+A N+ L+K + G D++ N ++ Sbjct: 293 DIIEDVLQSGKKLVIIARFIPEINAICRLLEKKGIRYSLLMGGVKDREEQVSAFQNGPEV 352 Query: 110 PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYY 169 + A+ G G+ L + +VF+SL + + +Q RI + G K Y Sbjct: 353 QVFVGQIATAGLGVTLT-AASTMVFYSLDYSMSNFEQARARI-----HRVGQKENCTYLY 406 Query: 170 LIAQNTIDELVLQRLRTKSTIQDLLLN 196 L A+ T+DE VL+ LR K+ + +L++ Sbjct: 407 LTAKGTVDEKVLKALRDKADLARMLVD 433 >gi|321253974|ref|XP_003192917.1| DNA repair protein [Cryptococcus gattii WM276] gi|317459386|gb|ADV21130.1| DNA repair protein, putative [Cryptococcus gattii WM276] Length = 993 Score = 49.7 bits (117), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 28/77 (36%), Positives = 42/77 (54%), Gaps = 6/77 (7%) Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 G GLNL GG+ L+ F W+ Q + RI + G KR V++Y L+ N IDE Sbjct: 686 GVGLNL-IGGSRLILFDSDWNPSTDLQAMARI-----HRDGQKRPVYIYRLLTTNAIDEK 739 Query: 180 VLQRLRTKSTIQDLLLN 196 + QR TK+ + D +++ Sbjct: 740 IYQRQITKTGLSDQMMD 756 >gi|227364978|ref|ZP_03849019.1| helicase domain protein [Lactobacillus reuteri MM2-3] gi|325681709|ref|ZP_08161229.1| SNF2/helicase domain protein [Lactobacillus reuteri MM4-1A] gi|227069989|gb|EEI08371.1| helicase domain protein [Lactobacillus reuteri MM2-3] gi|324979021|gb|EGC15968.1| SNF2/helicase domain protein [Lactobacillus reuteri MM4-1A] Length = 292 Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 43/156 (27%), Positives = 76/156 (48%), Gaps = 19/156 (12%) Query: 55 KIKALEVII--EKANAAPIIVAYHFNSDLARLQKAFP---------QGRTLDKDPCT-IQ 102 KIKA +I E A+ I++ F S LA L++ +G+T +D + Sbjct: 125 KIKATMNLIKDEMADNHKILLFSQFTSALAILKEKLANAGIKYFVIEGKTKKEDRLQFVD 184 Query: 103 EWNEGKIPLLF-AHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGF 161 E+N P +F + G GLNL ++++ F WW++ Q +R + G Sbjct: 185 EFNSYDQPAVFLISLKAGGTGLNL-TSADVVIHFDPWWNIAAENQATDRA-----HRIGQ 238 Query: 162 KRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 K V +Y +IAQNTI+E +++ + K+ + + +L+ Sbjct: 239 KNNVTIYKMIAQNTIEEKIVEMQQKKAALANSILSG 274 >gi|58265682|ref|XP_569997.1| DNA supercoiling [Cryptococcus neoformans var. neoformans JEC21] gi|57226229|gb|AAW42690.1| DNA supercoiling, putative [Cryptococcus neoformans var. neoformans JEC21] Length = 993 Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 28/82 (34%), Positives = 43/82 (52%), Gaps = 6/82 (7%) Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 G GLNL GG+ L+ F W+ Q + RI + G KR V++Y + N IDE Sbjct: 686 GVGLNL-IGGSRLILFDSDWNPSTDLQAMARI-----HRDGQKRPVYIYRFLTTNAIDEK 739 Query: 180 VLQRLRTKSTIQDLLLNALKKE 201 + QR TK+ + D +++ + E Sbjct: 740 IYQRQITKTGLSDQMMDQTRTE 761 >gi|328856768|gb|EGG05888.1| hypothetical protein MELLADRAFT_36442 [Melampsora larici-populina 98AG31] Length = 878 Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 30/98 (30%), Positives = 50/98 (51%), Gaps = 7/98 (7%) Query: 101 IQEW-NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQA 159 + +W +I + + G G+NL + ++F+ W+ QQ ++R + Sbjct: 718 VMDWQTRPEIFIFLLSTRAGGLGINLT-AADTVIFYDCDWNPSNDQQAMDR-----AHRL 771 Query: 160 GFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 G KR V VY LI TIDE +L+ RTK T+QD ++ + Sbjct: 772 GQKRQVTVYRLITSGTIDERILKLARTKKTVQDAVVGS 809 >gi|148544262|ref|YP_001271632.1| helicase domain-containing protein [Lactobacillus reuteri DSM 20016] gi|148531296|gb|ABQ83295.1| helicase domain protein [Lactobacillus reuteri DSM 20016] Length = 291 Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 43/156 (27%), Positives = 76/156 (48%), Gaps = 19/156 (12%) Query: 55 KIKALEVII--EKANAAPIIVAYHFNSDLARLQKAFP---------QGRTLDKDPCT-IQ 102 KIKA +I E A+ I++ F S LA L++ +G+T +D + Sbjct: 124 KIKATMNLIKDEMADNHKILLFSQFTSALAILKEKLANAGIKYFVIEGKTKKEDRLQFVD 183 Query: 103 EWNEGKIPLLF-AHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGF 161 E+N P +F + G GLNL ++++ F WW++ Q +R + G Sbjct: 184 EFNSYDQPAVFLISLKAGGTGLNL-TSADVVIHFDPWWNIAAENQATDRA-----HRIGQ 237 Query: 162 KRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 K V +Y +IAQNTI+E +++ + K+ + + +L+ Sbjct: 238 KNNVTIYKMIAQNTIEEKIVEMQQKKAALANSILSG 273 >gi|134109445|ref|XP_776837.1| hypothetical protein CNBC3280 [Cryptococcus neoformans var. neoformans B-3501A] gi|50259517|gb|EAL22190.1| hypothetical protein CNBC3280 [Cryptococcus neoformans var. neoformans B-3501A] Length = 1045 Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 28/82 (34%), Positives = 43/82 (52%), Gaps = 6/82 (7%) Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 G GLNL GG+ L+ F W+ Q + RI + G KR V++Y + N IDE Sbjct: 738 GVGLNL-IGGSRLILFDSDWNPSTDLQAMARI-----HRDGQKRPVYIYRFLTTNAIDEK 791 Query: 180 VLQRLRTKSTIQDLLLNALKKE 201 + QR TK+ + D +++ + E Sbjct: 792 IYQRQITKTGLSDQMMDQTRTE 813 >gi|237747228|ref|ZP_04577708.1| helicase [Oxalobacter formigenes HOxBLS] gi|229378579|gb|EEO28670.1| helicase [Oxalobacter formigenes HOxBLS] Length = 1126 Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 35/144 (24%), Positives = 70/144 (48%), Gaps = 16/144 (11%) Query: 71 IIVAYHFNSDLARLQK---------AFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGH 121 I+V F S L+ ++K A G T D+ I+ + +GK+P+ + G Sbjct: 970 ILVFSQFTSMLSLIEKELNSRRIPYALLTGDTADR-ASAIRHFQDGKVPVFLISLKAGGV 1028 Query: 122 GLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVL 181 GLNL + ++ + WW+ +E R + G + VFVY LIA+ T++E + Sbjct: 1029 GLNLT-AADTVIHYDPWWN-----PAVENQATDRAWRIGQDKPVFVYKLIAKGTLEEQIQ 1082 Query: 182 QRLRTKSTIQDLLLNALKKETIHV 205 + + K+ + + +L++ + + + + Sbjct: 1083 ELQQRKADLANAMLSSGQAQHVQI 1106 >gi|88857230|ref|ZP_01131873.1| putative DNA helicase with SNF2 domain [Pseudoalteromonas tunicata D2] gi|88820427|gb|EAR30239.1| putative DNA helicase with SNF2 domain [Pseudoalteromonas tunicata D2] Length = 1060 Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 36/140 (25%), Positives = 65/140 (46%), Gaps = 16/140 (11%) Query: 71 IIVAYHFNSDLARLQK---------AFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGH 121 +I+ F S L+ +++ A G+T D+ + + +G + + G Sbjct: 914 VIIFSQFTSMLSLIEQQLQALNLGYAILTGQTRDRQ-SAVDSFQQGDKSIFLISLKAGGT 972 Query: 122 GLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVL 181 GLNL + ++ F WW+ QQ +R + G K+ VFVY LI Q+TI+E V Sbjct: 973 GLNLT-AADTVIHFDPWWNPAVEQQATDRA-----YRIGQKKPVFVYKLICQDTIEERVY 1026 Query: 182 QRLRTKSTIQDLLLNALKKE 201 + + K+ + + +A K+ Sbjct: 1027 EMQQNKAALAESFFDAASKQ 1046 >gi|331019536|gb|EGH99592.1| helicase/SNF2 family domain protein [Pseudomonas syringae pv. lachrymans str. M302278PT] Length = 918 Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 40/162 (24%), Positives = 74/162 (45%), Gaps = 18/162 (11%) Query: 40 VYYDEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQ------- 90 V +D + K+ K+ +L + E+ A I++ F S L+ +++ Q Sbjct: 728 VNHDMPVNSKQGTSGKLNSLMEMFEELLAEGRKILLFSQFTSMLSLIEEELKQRGIAYAL 787 Query: 91 --GRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMI 148 G T D+ I ++ GK+P+ + G GLNL + ++ + WW+ Q Sbjct: 788 LTGSTRDRR-TPIHDFQSGKLPIFLISLKAGGTGLNLT-AADTVIHYDPWWNPAAENQAT 845 Query: 149 ERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 +R + G + VFVY +IA+ T++E + + R KS + Sbjct: 846 DRA-----YRIGQDKPVFVYKMIARGTVEEKIQRLQREKSAL 882 >gi|330967945|gb|EGH68205.1| helicase/SNF2 family domain-containing protein [Pseudomonas syringae pv. actinidiae str. M302091] Length = 918 Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 40/162 (24%), Positives = 74/162 (45%), Gaps = 18/162 (11%) Query: 40 VYYDEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQ------- 90 V +D + K+ K+ +L + E+ A I++ F S L+ +++ Q Sbjct: 728 VNHDMPVNSKQGTSGKLNSLMEMFEELLAEGRKILLFSQFTSMLSLIEEELKQRGIAYAL 787 Query: 91 --GRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMI 148 G T D+ I ++ GK+P+ + G GLNL + ++ + WW+ Q Sbjct: 788 LTGSTRDRR-TPIHDFQSGKLPIFLISLKAGGTGLNLT-AADTVIHYDPWWNPAAENQAT 845 Query: 149 ERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 +R + G + VFVY +IA+ T++E + + R KS + Sbjct: 846 DRA-----YRIGQDKPVFVYKMIARGTVEEKIQRLQREKSAL 882 >gi|213967360|ref|ZP_03395508.1| helicase/SNF2 family domain protein [Pseudomonas syringae pv. tomato T1] gi|302058432|ref|ZP_07249973.1| helicase/SNF2 family domain protein [Pseudomonas syringae pv. tomato K40] gi|302131163|ref|ZP_07257153.1| helicase/SNF2 family domain protein [Pseudomonas syringae pv. tomato NCPPB 1108] gi|213927661|gb|EEB61208.1| helicase/SNF2 family domain protein [Pseudomonas syringae pv. tomato T1] Length = 918 Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 40/162 (24%), Positives = 74/162 (45%), Gaps = 18/162 (11%) Query: 40 VYYDEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQ------- 90 V +D + K+ K+ +L + E+ A I++ F S L+ +++ Q Sbjct: 728 VNHDMPVNSKQGTSGKLNSLMEMFEELLAEGRKILLFSQFTSMLSLIEEELKQRGIAYAL 787 Query: 91 --GRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMI 148 G T D+ I ++ GK+P+ + G GLNL + ++ + WW+ Q Sbjct: 788 LTGSTRDRR-TPIHDFQSGKLPIFLISLKAGGTGLNLT-AADTVIHYDPWWNPAAENQAT 845 Query: 149 ERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 +R + G + VFVY +IA+ T++E + + R KS + Sbjct: 846 DRA-----YRIGQDKPVFVYKMIARGTVEEKIQRLQREKSAL 882 >gi|28869303|ref|NP_791922.1| helicase/SNF2 family domain-containing protein [Pseudomonas syringae pv. tomato str. DC3000] gi|28852544|gb|AAO55617.1| helicase/SNF2 family domain protein [Pseudomonas syringae pv. tomato str. DC3000] Length = 918 Score = 48.9 bits (115), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 40/162 (24%), Positives = 74/162 (45%), Gaps = 18/162 (11%) Query: 40 VYYDEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQ------- 90 V +D + K+ K+ +L + E+ A I++ F S L+ +++ Q Sbjct: 728 VNHDMPVNSKQGTSGKLNSLMEMFEELLAEGRKILLFSQFTSMLSLIEEELKQRGIAYAL 787 Query: 91 --GRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMI 148 G T D+ I ++ GK+P+ + G GLNL + ++ + WW+ Q Sbjct: 788 LTGSTRDRR-TPIHDFQSGKLPIFLISLKAGGTGLNLT-AADTVIHYDPWWNPAAENQAT 845 Query: 149 ERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 +R + G + VFVY +IA+ T++E + + R KS + Sbjct: 846 DRA-----YRIGQDKPVFVYKMIARGTVEEKIQRLQREKSAL 882 >gi|283458684|ref|YP_003363319.1| superfamily II DNA/RNA helicase [Rothia mucilaginosa DY-18] gi|283134734|dbj|BAI65499.1| superfamily II DNA/RNA helicase [Rothia mucilaginosa DY-18] Length = 1388 Score = 48.9 bits (115), Expect = 5e-04, Method: Composition-based stats. Identities = 38/150 (25%), Positives = 71/150 (47%), Gaps = 14/150 (9%) Query: 53 DEKIKALEVIIEKANAAPIIVAY--HFNSDLARLQKA-----FPQGRTLDKDPCTIQEWN 105 D ++ L ++EK + + + + S ARL K + G T ++ I+ + Sbjct: 1221 DYLVQQLPDLLEKGHRVLVFSQFTGYLKSISARLAKEGIGHLYLDGSTRNRAE-VIEAFT 1279 Query: 106 EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 G+ P+ + G GLNL ++ + WW+ QQ ++RI + G + V Sbjct: 1280 SGQEPVFLISLKAGGFGLNLTEADHVFIM-DPWWNPAAEQQAVDRI-----HRIGQDKEV 1333 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 VY L+A+ TI+E V+Q +K+ + D ++ Sbjct: 1334 HVYRLVAEGTIEEKVMQLKESKAALFDAVV 1363 >gi|330961339|gb|EGH61599.1| helicase/SNF2 family domain-containing protein [Pseudomonas syringae pv. maculicola str. ES4326] Length = 885 Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 40/162 (24%), Positives = 74/162 (45%), Gaps = 18/162 (11%) Query: 40 VYYDEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQ------- 90 V +D + K+ K+ +L + E+ A I++ F S L+ +++ Q Sbjct: 695 VNHDMPVNSKQGTSGKLNSLMEMFEELLAEGRKILLFSQFTSMLSLIEEELKQRGIAYAL 754 Query: 91 --GRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMI 148 G T D+ I ++ GK+P+ + G GLNL + ++ + WW+ Q Sbjct: 755 LTGSTRDRR-TPIHDFQSGKLPIFLISLKAGGTGLNLT-AADTVIHYDPWWNPAAENQAT 812 Query: 149 ERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 +R + G + VFVY +IA+ T++E + + R KS + Sbjct: 813 DRA-----YRIGQDKPVFVYKMIARGTVEEKIQRLQREKSAL 849 >gi|330878594|gb|EGH12743.1| helicase/SNF2 family domain-containing protein [Pseudomonas syringae pv. morsprunorum str. M302280PT] Length = 918 Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 40/162 (24%), Positives = 74/162 (45%), Gaps = 18/162 (11%) Query: 40 VYYDEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQ------- 90 V +D + K+ K+ +L + E+ A I++ F S L+ +++ Q Sbjct: 728 VNHDMPVNSKQGTSGKLNSLMEMFEELLAEGRKILLFSQFTSMLSLIEEELKQRGIAYAL 787 Query: 91 --GRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMI 148 G T D+ I ++ GK+P+ + G GLNL + ++ + WW+ Q Sbjct: 788 LTGSTRDRR-TPIHDFQSGKLPIFLISLKAGGTGLNLT-AADTVIHYDPWWNPAAENQAT 845 Query: 149 ERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 +R + G + VFVY +IA+ T++E + + R KS + Sbjct: 846 DRA-----YRIGQDKPVFVYKMIARGTVEEKIQRLQREKSAL 882 >gi|301381674|ref|ZP_07230092.1| helicase/SNF2 family domain protein [Pseudomonas syringae pv. tomato Max13] Length = 918 Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 40/162 (24%), Positives = 74/162 (45%), Gaps = 18/162 (11%) Query: 40 VYYDEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQ------- 90 V +D + K+ K+ +L + E+ A I++ F S L+ +++ Q Sbjct: 728 VNHDMPVNSKQGTSGKLNSLMEMFEELLAEGRKILLFSQFTSMLSLIEEELKQRGIAYAL 787 Query: 91 --GRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMI 148 G T D+ I ++ GK+P+ + G GLNL + ++ + WW+ Q Sbjct: 788 LTGSTRDRR-TPIHDFQSGKLPIFLISLKAGGTGLNLT-AADTVIHYDPWWNPAAENQAT 845 Query: 149 ERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 +R + G + VFVY +IA+ T++E + + R KS + Sbjct: 846 DRA-----YRIGQDKPVFVYKMIARGTVEEKIQRLQREKSAL 882 >gi|330982693|gb|EGH80796.1| SNF2-related:helicase [Pseudomonas syringae pv. aptata str. DSM 50252] Length = 280 Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 35/141 (24%), Positives = 64/141 (45%), Gaps = 16/141 (11%) Query: 66 ANAAPIIVAYHFNSDLARLQKAFPQ---------GRTLDKDPCTIQEWNEGKIPLLFAHP 116 A I++ F S L+ +++ Q G T D+ I ++ GK+P+ Sbjct: 118 AEGRKILLFSQFTSMLSLIEEELKQRGIAYALLTGSTRDRR-TPIHDFQSGKLPIFLISL 176 Query: 117 ASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTI 176 + G GLNL + ++ + WW+ Q + R + G + VFVY +IA+ T+ Sbjct: 177 KAGGTGLNL-TAADTVIHYDPWWNPAAENQATD-----RAYRIGQDKPVFVYKMIARGTV 230 Query: 177 DELVLQRLRTKSTIQDLLLNA 197 +E + + R KS + +L+ Sbjct: 231 EEKIQRLQREKSALASGVLDG 251 >gi|194466323|ref|ZP_03072310.1| Non-specific serine/threonine protein kinase [Lactobacillus reuteri 100-23] gi|194453359|gb|EDX42256.1| Non-specific serine/threonine protein kinase [Lactobacillus reuteri 100-23] Length = 1162 Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 43/156 (27%), Positives = 75/156 (48%), Gaps = 19/156 (12%) Query: 55 KIKALEVII--EKANAAPIIVAYHFNSDLARLQKAFP---------QGRTLDKDPCT-IQ 102 KIKA +I E A+ I++ F S LA L++ +G+T D + Sbjct: 995 KIKATMNLIKDEVADNHKILLFSQFTSALAILKEKLAKAGIKYFVIEGKTKKADRLQFVD 1054 Query: 103 EWNEGKIPLLF-AHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGF 161 E+N P +F + G GLNL ++++ F WW++ Q +R + G Sbjct: 1055 EFNSYDQPAVFLISLKAGGTGLNLT-SADVVIHFDPWWNIAAENQATDR-----AHRIGQ 1108 Query: 162 KRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 K V +Y +IAQNTI+E +++ + K+ + + +L+ Sbjct: 1109 KNNVTIYKMIAQNTIEEKIIEMQQKKAALANSILSG 1144 >gi|107100261|ref|ZP_01364179.1| hypothetical protein PaerPA_01001285 [Pseudomonas aeruginosa PACS2] Length = 773 Score = 48.5 bits (114), Expect = 5e-04, Method: Composition-based stats. Identities = 36/140 (25%), Positives = 63/140 (45%), Gaps = 16/140 (11%) Query: 66 ANAAPIIVAYHFNSDLARLQKAFPQ---------GRTLDKDPCTIQEWNEGKIPLLFAHP 116 A +++ F S LA ++ A Q G T D+ +Q + GK+P+ Sbjct: 616 AEGRRVLLFSQFTSMLALIEDALRQRGVDYVLLTGETRDRR-APVQRFQSGKVPVFLISL 674 Query: 117 ASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTI 176 + G GLNL + ++ + WW+ +E R + G + VFVY LIA+ T+ Sbjct: 675 KAGGVGLNLT-AADTVIHYDPWWN-----PAVENQASDRAYRIGQDKPVFVYRLIARGTV 728 Query: 177 DELVLQRLRTKSTIQDLLLN 196 +E + + K+ + D L + Sbjct: 729 EEKIQHLQQEKAALADGLFS 748 >gi|296390849|ref|ZP_06880324.1| helicase [Pseudomonas aeruginosa PAb1] Length = 773 Score = 48.5 bits (114), Expect = 5e-04, Method: Composition-based stats. Identities = 36/140 (25%), Positives = 63/140 (45%), Gaps = 16/140 (11%) Query: 66 ANAAPIIVAYHFNSDLARLQKAFPQ---------GRTLDKDPCTIQEWNEGKIPLLFAHP 116 A +++ F S LA ++ A Q G T D+ +Q + GK+P+ Sbjct: 616 AEGRRVLLFSQFTSMLALIEDALRQRGVDYVLLTGETRDRR-APVQRFQSGKVPVFLISL 674 Query: 117 ASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTI 176 + G GLNL + ++ + WW+ +E R + G + VFVY LIA+ T+ Sbjct: 675 KAGGVGLNLT-AADTVIHYDPWWN-----PAVENQASDRAYRIGQDKPVFVYRLIARGTV 728 Query: 177 DELVLQRLRTKSTIQDLLLN 196 +E + + K+ + D L + Sbjct: 729 EEKIQHLQQEKAALADGLFS 748 >gi|313105624|ref|ZP_07791890.1| putative helicase [Pseudomonas aeruginosa 39016] gi|310878392|gb|EFQ36986.1| putative helicase [Pseudomonas aeruginosa 39016] Length = 773 Score = 48.5 bits (114), Expect = 5e-04, Method: Composition-based stats. Identities = 36/140 (25%), Positives = 63/140 (45%), Gaps = 16/140 (11%) Query: 66 ANAAPIIVAYHFNSDLARLQKAFPQ---------GRTLDKDPCTIQEWNEGKIPLLFAHP 116 A +++ F S LA ++ A Q G T D+ +Q + GK+P+ Sbjct: 616 AEGRRVLLFSQFTSMLALIEDALRQRGVDYVLLTGETRDRR-APVQRFQSGKVPVFLISL 674 Query: 117 ASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTI 176 + G GLNL + ++ + WW+ +E R + G + VFVY LIA+ T+ Sbjct: 675 KAGGVGLNLT-AADTVIHYDPWWN-----PAVENQASDRAYRIGQDKPVFVYRLIARGTV 728 Query: 177 DELVLQRLRTKSTIQDLLLN 196 +E + + K+ + D L + Sbjct: 729 EEKIQHLQQEKAALADGLFS 748 >gi|227545238|ref|ZP_03975287.1| SNF2 helicase associated domain protein [Lactobacillus reuteri CF48-3A] gi|300909872|ref|ZP_07127333.1| non-specific serine/threonine protein kinase [Lactobacillus reuteri SD2112] gi|227184771|gb|EEI64842.1| SNF2 helicase associated domain protein [Lactobacillus reuteri CF48-3A] gi|300893737|gb|EFK87096.1| non-specific serine/threonine protein kinase [Lactobacillus reuteri SD2112] Length = 1161 Score = 48.5 bits (114), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 43/156 (27%), Positives = 75/156 (48%), Gaps = 19/156 (12%) Query: 55 KIKALEVII--EKANAAPIIVAYHFNSDLARLQKAFP---------QGRTLDKDPCT-IQ 102 KIKA +I E A+ I++ F S LA L++ +G+T D + Sbjct: 994 KIKATMNLIKDEVADNHKILLFSQFTSALAILKEKLAKAGIKYFVIEGKTKKADRLQFVD 1053 Query: 103 EWNEGKIPLLF-AHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGF 161 E+N P +F + G GLNL ++++ F WW++ Q +R + G Sbjct: 1054 EFNSYDQPAVFLISLKAGGTGLNLT-SADVVIHFDPWWNIAAENQATDR-----AHRIGQ 1107 Query: 162 KRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 K V +Y +IAQNTI+E +++ + K+ + + +L+ Sbjct: 1108 KNNVTIYKMIAQNTIEEKIIEMQQKKAALANSILSG 1143 >gi|125974243|ref|YP_001038153.1| SNF2-related protein [Clostridium thermocellum ATCC 27405] gi|125714468|gb|ABN52960.1| SNF2-related protein [Clostridium thermocellum ATCC 27405] Length = 375 Score = 48.5 bits (114), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 48/206 (23%), Positives = 92/206 (44%), Gaps = 26/206 (12%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEV 61 K+Y KF+++ + GE + + +K + QL + Y+ KH + L+ Sbjct: 192 KEYKKFKKDRVITIDGETLAGDTALTKLLYLRQLTS---IYNSNKH---------QVLKD 239 Query: 62 IIEKANAAPIIVAYHFNSDLARLQK-AFPQGRTL---DKDPCTIQEWNEGKIPLLFAHPA 117 I E +N ++ Y+F + ++ F R + + D ++ + + Sbjct: 240 IFESSNDR-FVIFYNFKREFEIIKNICFKIDRPISYINGDGTDLENYENKSNSITLVQYQ 298 Query: 118 SCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 + G+NLQ N +++FSL E Q +RI + G R F YYLI +N+I+ Sbjct: 299 AGASGVNLQ-KANRIIYFSLPLSSEFWMQSKKRI-----HRIGQNRTCFYYYLITENSIE 352 Query: 178 ELVLQRLRTKSTIQDLLLNALKKETI 203 E +L+ L+ + +D + +KE + Sbjct: 353 EKILEVLKQR---RDFTVELFEKEML 375 >gi|254245052|ref|ZP_04938374.1| hypothetical protein PA2G_05937 [Pseudomonas aeruginosa 2192] gi|126198430|gb|EAZ62493.1| hypothetical protein PA2G_05937 [Pseudomonas aeruginosa 2192] Length = 663 Score = 48.5 bits (114), Expect = 6e-04, Method: Composition-based stats. Identities = 36/140 (25%), Positives = 63/140 (45%), Gaps = 16/140 (11%) Query: 66 ANAAPIIVAYHFNSDLARLQKAFPQ---------GRTLDKDPCTIQEWNEGKIPLLFAHP 116 A +++ F S LA ++ A Q G T D+ +Q + GK+P+ Sbjct: 506 AEGRRVLLFSQFTSMLALIEDALRQRGVDYVLLTGETRDRR-APVQRFQSGKVPVFLISL 564 Query: 117 ASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTI 176 + G GLNL + ++ + WW+ +E R + G + VFVY LIA+ T+ Sbjct: 565 KAGGVGLNLT-AADTVIHYDPWWN-----PAVENQASDRAYRIGQDKPVFVYRLIARGTV 618 Query: 177 DELVLQRLRTKSTIQDLLLN 196 +E + + K+ + D L + Sbjct: 619 EEKIQHLQQEKAALADGLFS 638 >gi|254239157|ref|ZP_04932480.1| hypothetical protein PACG_05345 [Pseudomonas aeruginosa C3719] gi|126171088|gb|EAZ56599.1| hypothetical protein PACG_05345 [Pseudomonas aeruginosa C3719] Length = 663 Score = 48.5 bits (114), Expect = 6e-04, Method: Composition-based stats. Identities = 36/140 (25%), Positives = 63/140 (45%), Gaps = 16/140 (11%) Query: 66 ANAAPIIVAYHFNSDLARLQKAFPQ---------GRTLDKDPCTIQEWNEGKIPLLFAHP 116 A +++ F S LA ++ A Q G T D+ +Q + GK+P+ Sbjct: 506 AEGRRVLLFSQFTSMLALIEDALRQRGVDYVLLTGETRDRR-APVQRFQSGKVPVFLISL 564 Query: 117 ASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTI 176 + G GLNL + ++ + WW+ +E R + G + VFVY LIA+ T+ Sbjct: 565 KAGGVGLNLT-AADTVIHYDPWWN-----PAVENQASDRAYRIGQDKPVFVYRLIARGTV 618 Query: 177 DELVLQRLRTKSTIQDLLLN 196 +E + + K+ + D L + Sbjct: 619 EEKIQHLQQEKAALADGLFS 638 >gi|116048717|ref|YP_792483.1| helicase [Pseudomonas aeruginosa UCBPP-PA14] gi|115583938|gb|ABJ09953.1| probable helicase [Pseudomonas aeruginosa UCBPP-PA14] Length = 663 Score = 48.5 bits (114), Expect = 6e-04, Method: Composition-based stats. Identities = 36/140 (25%), Positives = 63/140 (45%), Gaps = 16/140 (11%) Query: 66 ANAAPIIVAYHFNSDLARLQKAFPQ---------GRTLDKDPCTIQEWNEGKIPLLFAHP 116 A +++ F S LA ++ A Q G T D+ +Q + GK+P+ Sbjct: 506 AEGRRVLLFSQFTSMLALIEDALRQRGVDYVLLTGETRDRR-APVQRFQSGKVPVFLISL 564 Query: 117 ASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTI 176 + G GLNL + ++ + WW+ +E R + G + VFVY LIA+ T+ Sbjct: 565 KAGGVGLNLT-AADTVIHYDPWWN-----PAVENQASDRAYRIGQDKPVFVYRLIARGTV 618 Query: 177 DELVLQRLRTKSTIQDLLLN 196 +E + + K+ + D L + Sbjct: 619 EEKIQHLQQEKAALADGLFS 638 >gi|15595996|ref|NP_249490.1| helicase [Pseudomonas aeruginosa PAO1] gi|218893257|ref|YP_002442126.1| putative helicase [Pseudomonas aeruginosa LESB58] gi|9946691|gb|AAG04188.1|AE004515_4 probable helicase [Pseudomonas aeruginosa PAO1] gi|218773485|emb|CAW29297.1| probable helicase [Pseudomonas aeruginosa LESB58] Length = 663 Score = 48.5 bits (114), Expect = 6e-04, Method: Composition-based stats. Identities = 36/140 (25%), Positives = 63/140 (45%), Gaps = 16/140 (11%) Query: 66 ANAAPIIVAYHFNSDLARLQKAFPQ---------GRTLDKDPCTIQEWNEGKIPLLFAHP 116 A +++ F S LA ++ A Q G T D+ +Q + GK+P+ Sbjct: 506 AEGRRVLLFSQFTSMLALIEDALRQRGVDYVLLTGETRDRR-APVQRFQSGKVPVFLISL 564 Query: 117 ASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTI 176 + G GLNL + ++ + WW+ +E R + G + VFVY LIA+ T+ Sbjct: 565 KAGGVGLNLT-AADTVIHYDPWWN-----PAVENQASDRAYRIGQDKPVFVYRLIARGTV 618 Query: 177 DELVLQRLRTKSTIQDLLLN 196 +E + + K+ + D L + Sbjct: 619 EEKIQHLQQEKAALADGLFS 638 >gi|300854652|ref|YP_003779636.1| putative helicase [Clostridium ljungdahlii DSM 13528] gi|300434767|gb|ADK14534.1| predicted helicase [Clostridium ljungdahlii DSM 13528] Length = 1088 Score = 48.5 bits (114), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 26/80 (32%), Positives = 43/80 (53%), Gaps = 6/80 (7%) Query: 101 IQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 ++E+NEG+IP+ + G GLNL +I++ + WW+ +E R + G Sbjct: 977 VREFNEGQIPIFLISLKAGGTGLNLT-SADIVIHYDPWWN-----PAVENQASDRAHRIG 1030 Query: 161 FKRAVFVYYLIAQNTIDELV 180 K+ V V LIA+ TI+E + Sbjct: 1031 QKKTVEVIRLIAKGTIEEKI 1050 >gi|330954490|gb|EGH54750.1| helicase/SNF2 domain-containing protein [Pseudomonas syringae Cit 7] Length = 914 Score = 48.1 bits (113), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 38/154 (24%), Positives = 71/154 (46%), Gaps = 18/154 (11%) Query: 55 KIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQ---------GRTLDKDPCTIQE 103 K+ +L + E+ A I++ F S L+ +++ Q G T D+ I + Sbjct: 739 KLNSLMEMFEELLAEGRKILLFSQFTSMLSLIEEELKQRGIAYALLTGSTRDRR-TPIHD 797 Query: 104 WNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKR 163 + GK+P+ + G GLNL + ++ + WW+ Q +R + G + Sbjct: 798 FQSGKLPIFLISLKAGGTGLNLT-AADTVIHYDPWWNPAAENQATDRA-----YRIGQDK 851 Query: 164 AVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 VFVY +IA+ T++E + + R KS + +L+ Sbjct: 852 PVFVYKMIARGTVEEKIQRLQREKSALASGVLDG 885 >gi|66045135|ref|YP_234976.1| SNF2-related:helicase, C-terminal:SWIM Zn-finger [Pseudomonas syringae pv. syringae B728a] gi|63255842|gb|AAY36938.1| SNF2-related:Helicase, C-terminal:SWIM Zn-finger [Pseudomonas syringae pv. syringae B728a] Length = 914 Score = 48.1 bits (113), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 38/154 (24%), Positives = 71/154 (46%), Gaps = 18/154 (11%) Query: 55 KIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQ---------GRTLDKDPCTIQE 103 K+ +L + E+ A I++ F S L+ +++ Q G T D+ I + Sbjct: 739 KLNSLMEMFEELLAEGRKILLFSQFTSMLSLIEEELKQRGIAYALLTGSTRDRR-TPIHD 797 Query: 104 WNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKR 163 + GK+P+ + G GLNL + ++ + WW+ Q +R + G + Sbjct: 798 FQSGKLPIFLISLKAGGTGLNLT-AADTVIHYDPWWNPAAENQATDRA-----YRIGQDK 851 Query: 164 AVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 VFVY +IA+ T++E + + R KS + +L+ Sbjct: 852 PVFVYKMIARGTVEEKIQRLQREKSALASGVLDG 885 >gi|170693768|ref|ZP_02884925.1| Non-specific serine/threonine protein kinase [Burkholderia graminis C4D1M] gi|170141186|gb|EDT09357.1| Non-specific serine/threonine protein kinase [Burkholderia graminis C4D1M] Length = 1162 Score = 48.1 bits (113), Expect = 6e-04, Method: Composition-based stats. Identities = 26/96 (27%), Positives = 49/96 (51%), Gaps = 6/96 (6%) Query: 101 IQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 +Q + +G++PL + G GLNL + ++ + WW+ Q +R + G Sbjct: 1045 VQRFQQGEVPLFLISLKAGGVGLNLT-AADTVIHYDPWWNPAAENQATDR-----AHRLG 1098 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + VFVY LIA +I+E +++ K+ + D +L+ Sbjct: 1099 QDKPVFVYKLIAAGSIEEKIVELQEQKAGLADSILS 1134 >gi|193712533|ref|XP_001943954.1| PREDICTED: putative DNA helicase Ino80-like isoform 1 [Acyrthosiphon pisum] Length = 1335 Score = 48.1 bits (113), Expect = 7e-04, Method: Compositional matrix adjust. Identities = 33/103 (32%), Positives = 52/103 (50%), Gaps = 12/103 (11%) Query: 105 NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQM--IERIGVTRQRQAGFK 162 N I + + G G+NL ++ + S W + Q M R+G T+Q Sbjct: 1078 NRSDIFVFLLSTRAGGLGINLTAADTVIFYDSDWNPTVDQQAMDRAHRLGQTKQ------ 1131 Query: 163 RAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA--LKKETI 203 V VY LI QN+I+E +LQR + KS IQ ++++ LK +T+ Sbjct: 1132 --VTVYRLITQNSIEERILQRAKEKSEIQRMVISGGNLKPDTL 1172 >gi|330889124|gb|EGH21785.1| helicase/SNF2 domain-containing protein [Pseudomonas syringae pv. mori str. 301020] Length = 914 Score = 48.1 bits (113), Expect = 7e-04, Method: Compositional matrix adjust. Identities = 38/154 (24%), Positives = 71/154 (46%), Gaps = 18/154 (11%) Query: 55 KIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQ---------GRTLDKDPCTIQE 103 K+ +L + E+ A I++ F S L+ +++ Q G T D+ I + Sbjct: 739 KLNSLMEMFEELLAEGRKILLFSQFTSMLSLIEEELKQRGIAYALLTGSTRDRR-TPIHD 797 Query: 104 WNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKR 163 + GK+P+ + G GLNL + ++ + WW+ Q +R + G + Sbjct: 798 FQSGKLPIFLISLKAGGTGLNLT-AADTVIHYDPWWNPAAENQATDRA-----YRIGQDK 851 Query: 164 AVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 VFVY +IA+ T++E + + R KS + +L+ Sbjct: 852 PVFVYKMIARGTVEEKIQRLQREKSALASGVLDG 885 >gi|325478692|gb|EGC81803.1| hypothetical protein HMPREF9290_0083 [Anaerococcus prevotii ACS-065-V-Col13] Length = 66 Score = 48.1 bits (113), Expect = 7e-04, Method: Composition-based stats. Identities = 25/65 (38%), Positives = 37/65 (56%), Gaps = 2/65 (3%) Query: 51 VHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIP 110 +HD K+ ALE +IE AN P+++AY + S L R++ F R + +EWN G IP Sbjct: 4 IHDIKLDALEDLIEGANGKPVLIAYWYKSYLRRIKDKF-DVREFKTNE-DFKEWNRGNIP 61 Query: 111 LLFAH 115 + H Sbjct: 62 VAITH 66 >gi|227015822|gb|ACP17919.1| putative non-specific serine/threonine protein kinase [Pseudomonas nitroreducens] Length = 1093 Score = 48.1 bits (113), Expect = 7e-04, Method: Composition-based stats. Identities = 39/150 (26%), Positives = 70/150 (46%), Gaps = 18/150 (12%) Query: 52 HDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQK---------AFPQGRTLDKDPCT 100 H K+ AL ++++ A +++ F S LA +Q A G T D+ Sbjct: 921 HSGKLSALLEMLDELLAEGRRVLLFSQFTSMLALIQAQLQARNIPYALLTGETRDRRQ-P 979 Query: 101 IQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 + ++ +G++PL + G GLNL + ++ + WW+ QQ +R + G Sbjct: 980 VDDFQQGRVPLFLISLKAGGTGLNLT-TADTVIHYDPWWNPAVEQQATDR-----AYRIG 1033 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 + VFVY LIA+ T++E + Q K+ + Sbjct: 1034 QDKPVFVYKLIARGTLEEKIQQLQARKAAL 1063 >gi|330897626|gb|EGH29045.1| SNF2-related:helicase [Pseudomonas syringae pv. japonica str. M301072PT] Length = 559 Score = 48.1 bits (113), Expect = 7e-04, Method: Compositional matrix adjust. Identities = 41/169 (24%), Positives = 76/169 (44%), Gaps = 18/169 (10%) Query: 40 VYYDEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQ------- 90 V D + K+ K+ +L + E+ A I++ F S L+ +++ Q Sbjct: 369 VNQDMPVNSKQGTSGKLNSLMEMFEELLAEGRKILLFSQFTSMLSLIEEELKQRGIAYAL 428 Query: 91 --GRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMI 148 G T D+ I ++ GK+P+ + G GLNL + ++ + WW+ Q Sbjct: 429 LTGSTRDRR-TPIHDFQSGKLPIFLISLKAGGTGLNLT-AADTVIHYDPWWNPAAENQAT 486 Query: 149 ERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 +R + G + VFVY +IA+ T++E + + R KS + +L+ Sbjct: 487 DRA-----YRIGQDKPVFVYKMIARGTVEEKIQRLQREKSALASGVLDG 530 >gi|330973232|gb|EGH73298.1| SNF2-related:helicase [Pseudomonas syringae pv. aceris str. M302273PT] Length = 880 Score = 48.1 bits (113), Expect = 7e-04, Method: Compositional matrix adjust. Identities = 38/154 (24%), Positives = 71/154 (46%), Gaps = 18/154 (11%) Query: 55 KIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQ---------GRTLDKDPCTIQE 103 K+ +L + E+ A I++ F S L+ +++ Q G T D+ I + Sbjct: 705 KLNSLMEMFEELLAEGRKILLFSQFTSMLSLIEEELKQRGIAYALLTGSTRDRR-TPIHD 763 Query: 104 WNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKR 163 + GK+P+ + G GLNL + ++ + WW+ Q +R + G + Sbjct: 764 FQSGKLPIFLISLKAGGTGLNLT-AADTVIHYDPWWNPAAENQATDRA-----YRIGQDK 817 Query: 164 AVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 VFVY +IA+ T++E + + R KS + +L+ Sbjct: 818 PVFVYKMIARGTVEEKIQRLQREKSALASGVLDG 851 >gi|255524582|ref|ZP_05391536.1| Non-specific serine/threonine protein kinase [Clostridium carboxidivorans P7] gi|296185768|ref|ZP_06854175.1| SNF2 family [Clostridium carboxidivorans P7] gi|255511735|gb|EET88021.1| Non-specific serine/threonine protein kinase [Clostridium carboxidivorans P7] gi|296049596|gb|EFG89023.1| SNF2 family [Clostridium carboxidivorans P7] Length = 929 Score = 48.1 bits (113), Expect = 7e-04, Method: Compositional matrix adjust. Identities = 29/95 (30%), Positives = 51/95 (53%), Gaps = 7/95 (7%) Query: 101 IQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 ++E+NEG+IP+ + G GLNL +I++ + WW+ +E R + G Sbjct: 818 VREFNEGEIPIFLISLKAGGTGLNLT-SADIVIHYDPWWN-----PAVENQASDRAHRIG 871 Query: 161 FKRAVFVYYLIAQNTIDELVLQ-RLRTKSTIQDLL 194 K+ V V LIA+ TI+E + + + + K I D++ Sbjct: 872 QKKTVEVIRLIAKGTIEEKIHKIQEKKKEIINDVI 906 >gi|302184809|ref|ZP_07261482.1| helicase/SNF2 domain-containing protein [Pseudomonas syringae pv. syringae 642] Length = 880 Score = 48.1 bits (113), Expect = 7e-04, Method: Compositional matrix adjust. Identities = 38/154 (24%), Positives = 71/154 (46%), Gaps = 18/154 (11%) Query: 55 KIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQ---------GRTLDKDPCTIQE 103 K+ +L + E+ A I++ F S L+ +++ Q G T D+ I + Sbjct: 705 KLNSLMEMFEELLAEGRKILLFSQFTSMLSLIEEELKQRGIAYALLTGSTRDRR-TPIHD 763 Query: 104 WNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKR 163 + GK+P+ + G GLNL + ++ + WW+ Q +R + G + Sbjct: 764 FQSGKLPIFLISLKAGGTGLNLT-AADTVIHYDPWWNPAAENQATDRA-----YRIGQDK 817 Query: 164 AVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 VFVY +IA+ T++E + + R KS + +L+ Sbjct: 818 PVFVYKMIARGTVEEKIQRLQREKSALASGVLDG 851 >gi|158320324|ref|YP_001512831.1| helicase domain-containing protein [Alkaliphilus oremlandii OhILAs] gi|158140523|gb|ABW18835.1| helicase domain protein [Alkaliphilus oremlandii OhILAs] Length = 419 Score = 48.1 bits (113), Expect = 7e-04, Method: Compositional matrix adjust. Identities = 49/200 (24%), Positives = 84/200 (42%), Gaps = 18/200 (9%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEV 61 K Y + ++ Y L+ + A N +K ++ QL G + D+ K++ K+ AL+ Sbjct: 211 KLYKRILKDSYVQLEKGEVTAQNLLTKLLRLSQLTGGFIGADD-GTIKQISKAKLDALKE 269 Query: 62 IIEKANAA-----------PIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIP 110 IIE A P I A D + ++ G D+ + E + Sbjct: 270 IIEDMKDAGKKLVVFARFLPEINAIKNMLDEMEISYSYITGEVKDRGEEVRKFQEEDGVR 329 Query: 111 LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYL 170 + A + G G+ L + + +VF+SL ++ + Q RI + G K +L Sbjct: 330 VFIAQIQTAGLGITL-HAADTVVFYSLDFNYANYSQARARI-----HRIGQKNTCTYIHL 383 Query: 171 IAQNTIDELVLQRLRTKSTI 190 IA T+DE +L+ L K I Sbjct: 384 IAPGTVDEKILKALEKKENI 403 >gi|328718561|ref|XP_003246514.1| PREDICTED: putative DNA helicase Ino80-like isoform 2 [Acyrthosiphon pisum] Length = 1314 Score = 48.1 bits (113), Expect = 7e-04, Method: Compositional matrix adjust. Identities = 33/103 (32%), Positives = 52/103 (50%), Gaps = 12/103 (11%) Query: 105 NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQM--IERIGVTRQRQAGFK 162 N I + + G G+NL ++ + S W + Q M R+G T+Q Sbjct: 1078 NRSDIFVFLLSTRAGGLGINLTAADTVIFYDSDWNPTVDQQAMDRAHRLGQTKQ------ 1131 Query: 163 RAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA--LKKETI 203 V VY LI QN+I+E +LQR + KS IQ ++++ LK +T+ Sbjct: 1132 --VTVYRLITQNSIEERILQRAKEKSEIQRMVISGGNLKPDTL 1172 >gi|237797684|ref|ZP_04586145.1| SNF2-related:helicase [Pseudomonas syringae pv. oryzae str. 1_6] gi|331020534|gb|EGI00591.1| SNF2-related:helicase [Pseudomonas syringae pv. oryzae str. 1_6] Length = 918 Score = 48.1 bits (113), Expect = 7e-04, Method: Compositional matrix adjust. Identities = 40/162 (24%), Positives = 73/162 (45%), Gaps = 18/162 (11%) Query: 40 VYYDEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQ------- 90 V D + K+ K+ +L + E+ A I++ F S L+ +++ Q Sbjct: 728 VNQDMPANSKQGTSGKLNSLMEMFEELLAEGRKILLFSQFTSMLSLIEEELKQRGIAYAL 787 Query: 91 --GRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMI 148 G T D+ I ++ GK+P+ + G GLNL + ++ + WW+ Q Sbjct: 788 LTGSTRDRR-TPIHDFQSGKLPIFLISLKAGGTGLNLT-AADTVIHYDPWWNPAAENQAT 845 Query: 149 ERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 +R + G + VFVY +IA+ T++E + + R KS + Sbjct: 846 DRA-----YRIGQDKPVFVYKMIARGTVEEKIQRLQREKSAL 882 >gi|198283188|ref|YP_002219509.1| Non-specific serine/threonine protein kinase [Acidithiobacillus ferrooxidans ATCC 53993] gi|218667367|ref|YP_002425417.1| DNA helicase, SNF2/RAD54 family [Acidithiobacillus ferrooxidans ATCC 23270] gi|198247709|gb|ACH83302.1| Non-specific serine/threonine protein kinase [Acidithiobacillus ferrooxidans ATCC 53993] gi|218519580|gb|ACK80166.1| DNA helicase, SNF2/RAD54 family [Acidithiobacillus ferrooxidans ATCC 23270] Length = 1113 Score = 48.1 bits (113), Expect = 7e-04, Method: Composition-based stats. Identities = 32/113 (28%), Positives = 52/113 (46%), Gaps = 7/113 (6%) Query: 91 GRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 G T D+ I + G++PL + G GLNL + ++ + WW+ Q +R Sbjct: 989 GSTQDRK-TPIDRFQRGEVPLFLISLKAGGVGLNLT-AADTVIHYDPWWNPAAENQATDR 1046 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETI 203 + G KR VFVY LI +I+E +L K+ + +L +KE + Sbjct: 1047 -----AHRIGQKRQVFVYKLIVAGSIEEKILALQEKKAILAAGVLEKTQKEKL 1094 >gi|108885078|ref|NP_072678.2| SNF2 family helicase putative [Mycoplasma genitalium G37] gi|94730430|sp|P47264|Y018_MYCGE RecName: Full=Uncharacterized ATP-dependent helicase MG018 gi|84626126|gb|AAC71234.2| helicase SNF2 family, putative [Mycoplasma genitalium G37] gi|166078676|gb|ABY79294.1| helicase SNF2 family, putative [synthetic Mycoplasma genitalium JCVI-1.0] Length = 1031 Score = 48.1 bits (113), Expect = 8e-04, Method: Compositional matrix adjust. Identities = 29/97 (29%), Positives = 48/97 (49%), Gaps = 7/97 (7%) Query: 87 AFPQGRTLDKDPCTIQEWNEGKIP-LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQ 145 F +T+ IQ++N K P ++ A + G G+NL +++ F +WW+ Sbjct: 908 VFDGRKTVKNRNTIIQKFNSAKEPCVMLASLKAGGVGINLT-AAEVVIHFDVWWN----- 961 Query: 146 QMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQ 182 +E R + G + V VY +IA+NTI+E V Q Sbjct: 962 SAVENQATDRAHRIGQSKTVQVYRIIAKNTIEERVCQ 998 >gi|315650529|ref|ZP_07903595.1| Snf2 family helicase [Eubacterium saburreum DSM 3986] gi|315487184|gb|EFU77500.1| Snf2 family helicase [Eubacterium saburreum DSM 3986] Length = 1142 Score = 47.8 bits (112), Expect = 8e-04, Method: Composition-based stats. Identities = 29/102 (28%), Positives = 49/102 (48%), Gaps = 6/102 (5%) Query: 95 DKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 DK + ++N + + G GLNL G +I++ + WW+ Q +R Sbjct: 1027 DKRLTLVNKFNHDDTNVFLISLKAGGTGLNLT-GADIVIHYDPWWNFAAQNQATDR---- 1081 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + G K V VY LIA+ TI+E +++ +K + D +LN Sbjct: 1082 -AHRIGQKNTVTVYRLIAKGTIEERIVKLQESKKDLADRVLN 1122 >gi|315303447|ref|ZP_07874044.1| DNA/RNA helicase protein [Listeria ivanovii FSL F6-596] gi|313628192|gb|EFR96728.1| DNA/RNA helicase protein [Listeria ivanovii FSL F6-596] Length = 1072 Score = 47.8 bits (112), Expect = 8e-04, Method: Compositional matrix adjust. Identities = 35/141 (24%), Positives = 63/141 (44%), Gaps = 16/141 (11%) Query: 65 KANAAPIIVAYHFNSDLARLQKAFPQ-GRTL----DKDPC-----TIQEWNEGKIPLLFA 114 + N I++ F LA +++ + G+T K P + +NEG+ + Sbjct: 910 RENGKRILIFSQFTGMLAIIRRKLEEDGQTFFYMDGKTPSRTRLDMVNSFNEGENDIFLI 969 Query: 115 HPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQN 174 + G GLNL G + ++ + LWW+ +E R + G KR V V+ +I + Sbjct: 970 SLKAGGTGLNL-VGADTVILYDLWWN-----PAVEEQATGRAHRIGQKRVVQVFRMITKG 1023 Query: 175 TIDELVLQRLRTKSTIQDLLL 195 TI+E + + K + D L+ Sbjct: 1024 TIEERIFDLQKKKQALVDELI 1044 >gi|295699426|ref|YP_003607319.1| SNF2-related protein [Burkholderia sp. CCGE1002] gi|295438639|gb|ADG17808.1| SNF2-related protein [Burkholderia sp. CCGE1002] Length = 1172 Score = 47.8 bits (112), Expect = 8e-04, Method: Composition-based stats. Identities = 31/116 (26%), Positives = 56/116 (48%), Gaps = 7/116 (6%) Query: 80 DLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWW 139 D A + A G T D+ ++ + +G++PL + G GLNL + ++ + WW Sbjct: 1035 DEAAIPYAMLTGDTTDR-VTPVERFQQGEVPLFLISLKAGGVGLNLT-AADTVIHYDPWW 1092 Query: 140 DLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 + Q +R + G + VFVY LIA +I+E +++ K+ + D +L Sbjct: 1093 NPAAENQATDR-----AHRLGQDKPVFVYKLIAAGSIEEKIVELQEHKAGLADSIL 1143 >gi|255327378|ref|ZP_05368452.1| helicase/SNF2 family domain protein [Rothia mucilaginosa ATCC 25296] gi|255295658|gb|EET75001.1| helicase/SNF2 family domain protein [Rothia mucilaginosa ATCC 25296] Length = 1384 Score = 47.8 bits (112), Expect = 8e-04, Method: Composition-based stats. Identities = 27/95 (28%), Positives = 49/95 (51%), Gaps = 6/95 (6%) Query: 101 IQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 I+ + G+ P+ + G GLNL ++ + WW+ QQ ++RI + G Sbjct: 1271 IEAFTSGQEPVFLISLKAGGFGLNLTEADHVFIM-DPWWNPAAEQQAVDRI-----HRIG 1324 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 + V VY L+A+ TI+E V+Q +K+ + D ++ Sbjct: 1325 QDKEVHVYRLVAEGTIEEKVMQLKESKAALFDAVV 1359 >gi|209521910|ref|ZP_03270580.1| Non-specific serine/threonine protein kinase [Burkholderia sp. H160] gi|209497652|gb|EDZ97837.1| Non-specific serine/threonine protein kinase [Burkholderia sp. H160] Length = 1162 Score = 47.8 bits (112), Expect = 9e-04, Method: Composition-based stats. Identities = 31/116 (26%), Positives = 56/116 (48%), Gaps = 7/116 (6%) Query: 80 DLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWW 139 D A + A G T D+ ++ + +G++PL + G GLNL + ++ + WW Sbjct: 1025 DEAAIPYAMLTGDTTDR-VTPVERFQQGEVPLFLISLKAGGVGLNLT-AADTVIHYDPWW 1082 Query: 140 DLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 + Q +R + G + VFVY LIA +I+E +++ K+ + D +L Sbjct: 1083 NPAAENQATDR-----AHRLGQDKPVFVYKLIAAGSIEEKIVELQEHKAGLADSIL 1133 >gi|315282593|ref|ZP_07870972.1| SNF2 family helicase [Listeria marthii FSL S4-120] gi|313613760|gb|EFR87525.1| SNF2 family helicase [Listeria marthii FSL S4-120] Length = 1072 Score = 47.8 bits (112), Expect = 9e-04, Method: Compositional matrix adjust. Identities = 37/141 (26%), Positives = 63/141 (44%), Gaps = 16/141 (11%) Query: 65 KANAAPIIVAYHFNSDLARL-QKAFPQGRTL----DKDPC-----TIQEWNEGKIPLLFA 114 + N I++ F L+ + QK G+TL K P + +NEG+ + Sbjct: 910 RENGKRILIFSQFTGMLSIIRQKLEEDGQTLFYMDGKTPSKTRLDMVNAFNEGENDIFLI 969 Query: 115 HPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQN 174 + G GLNL G + ++ + LWW+ +E R + G KR V V+ +I + Sbjct: 970 SLKAGGTGLNL-VGADTVILYDLWWN-----PAVEEQATGRAHRIGQKRVVQVFRMITKG 1023 Query: 175 TIDELVLQRLRTKSTIQDLLL 195 TI+E + + K + D L+ Sbjct: 1024 TIEERIFDLQKKKQALVDELI 1044 >gi|307727814|ref|YP_003911027.1| SNF2-related protein [Burkholderia sp. CCGE1003] gi|307588339|gb|ADN61736.1| SNF2-related protein [Burkholderia sp. CCGE1003] Length = 1227 Score = 47.8 bits (112), Expect = 9e-04, Method: Composition-based stats. Identities = 26/96 (27%), Positives = 49/96 (51%), Gaps = 6/96 (6%) Query: 101 IQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 +Q + +G++PL + G GLNL + ++ + WW+ Q +R + G Sbjct: 1110 VQRFQQGEVPLFLISLKAGGVGLNLT-AADTVIHYDPWWNPAAENQATDR-----AHRLG 1163 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + VFVY LIA +I+E +++ K+ + D +L+ Sbjct: 1164 QDKPVFVYKLIAAGSIEEKIVELQEQKAGLADSILS 1199 >gi|156405034|ref|XP_001640537.1| predicted protein [Nematostella vectensis] gi|156227672|gb|EDO48474.1| predicted protein [Nematostella vectensis] Length = 1429 Score = 47.8 bits (112), Expect = 9e-04, Method: Compositional matrix adjust. Identities = 28/80 (35%), Positives = 43/80 (53%), Gaps = 10/80 (12%) Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQM--IERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 G G+NL ++ + S W + Q M R+G T+Q V VY L+ +NTI+ Sbjct: 1066 GLGINLTAADTVIFYDSDWNPTVDEQAMDRAHRLGQTKQ--------VTVYRLVTKNTIE 1117 Query: 178 ELVLQRLRTKSTIQDLLLNA 197 E +LQR R KS IQ ++++ Sbjct: 1118 ERILQRAREKSEIQKMVISG 1137 >gi|330881511|gb|EGH15660.1| helicase/SNF2 domain-containing protein [Pseudomonas syringae pv. glycinea str. race 4] Length = 337 Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust. Identities = 35/141 (24%), Positives = 64/141 (45%), Gaps = 16/141 (11%) Query: 66 ANAAPIIVAYHFNSDLARLQKAFPQ---------GRTLDKDPCTIQEWNEGKIPLLFAHP 116 A I++ F S L+ +++ Q G T D+ I ++ GK+P+ Sbjct: 175 AEGRKILLFSQFTSMLSLIEEELKQRGIAYALLTGSTRDRR-TPIHDFQSGKLPIFLISL 233 Query: 117 ASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTI 176 + G GLNL + ++ + WW+ Q + R + G + VFVY +IA+ T+ Sbjct: 234 KAGGTGLNLT-AADTVIHYDPWWNPAAENQATD-----RAYRIGQDKPVFVYKMIARGTV 287 Query: 177 DELVLQRLRTKSTIQDLLLNA 197 +E + + R KS + +L+ Sbjct: 288 EEKIQRLQREKSALAAGVLDG 308 >gi|71019185|ref|XP_759823.1| hypothetical protein UM03676.1 [Ustilago maydis 521] gi|46099621|gb|EAK84854.1| hypothetical protein UM03676.1 [Ustilago maydis 521] Length = 1060 Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust. Identities = 31/85 (36%), Positives = 43/85 (50%), Gaps = 6/85 (7%) Query: 118 SCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 S G GLNL G N LV W+ Q + RI + G K+ ++Y L+ T+D Sbjct: 762 SGGVGLNL-IGANRLVLIDSDWNPSTDLQAMARI-----HRDGQKKPCYIYRLLLSGTMD 815 Query: 178 ELVLQRLRTKSTIQDLLLNALKKET 202 E + QR +K + D L+NA KK T Sbjct: 816 EKIYQRQISKLGLSDSLMNAEKKTT 840 >gi|114777053|ref|ZP_01452073.1| Superfamily II DNA/RNA helicase, SNF2 family protein [Mariprofundus ferrooxydans PV-1] gi|114552574|gb|EAU55034.1| Superfamily II DNA/RNA helicase, SNF2 family protein [Mariprofundus ferrooxydans PV-1] Length = 1095 Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust. Identities = 27/102 (26%), Positives = 51/102 (50%), Gaps = 7/102 (6%) Query: 91 GRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 G+T D++ ++ + G++PL + G GLNL + ++ + WW+ +E Sbjct: 975 GQTRDRE-TPVERFQNGEVPLFLISLKAGGVGLNLT-AADTVIHYDPWWN-----PAVEA 1027 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQD 192 R + G +AVFVY L+ + T++E +L+ K + D Sbjct: 1028 QATDRAHRIGQDKAVFVYKLLTEGTVEERILEMQDRKRELAD 1069 >gi|298486414|ref|ZP_07004475.1| helicase/SNF2 family domain protein [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] gi|298159042|gb|EFI00102.1| helicase/SNF2 family domain protein [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] Length = 914 Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust. Identities = 37/147 (25%), Positives = 68/147 (46%), Gaps = 18/147 (12%) Query: 55 KIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQ---------GRTLDKDPCTIQE 103 K+ +L + E+ A I++ F S L+ +++ Q G T D+ I + Sbjct: 739 KLNSLMEMFEELLAEGRKILLFSQFTSMLSLIEEELKQRGIAYALLTGSTRDRR-TPIHD 797 Query: 104 WNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKR 163 + GK+P+ + G GLNL + ++ + WW+ Q +R + G + Sbjct: 798 FQSGKLPIFLISLKAGGTGLNLT-AADTVIHYDPWWNPAAENQATDRA-----YRIGQDK 851 Query: 164 AVFVYYLIAQNTIDELVLQRLRTKSTI 190 VFVY +IA+ T++E + + R KS + Sbjct: 852 PVFVYKMIARGTVEEKIQRLQREKSAL 878 >gi|289624075|ref|ZP_06457029.1| helicase/SNF2 domain-containing protein [Pseudomonas syringae pv. aesculi str. NCPPB3681] gi|330869863|gb|EGH04572.1| helicase/SNF2 domain-containing protein [Pseudomonas syringae pv. aesculi str. 0893_23] Length = 914 Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust. Identities = 37/147 (25%), Positives = 68/147 (46%), Gaps = 18/147 (12%) Query: 55 KIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQ---------GRTLDKDPCTIQE 103 K+ +L + E+ A I++ F S L+ +++ Q G T D+ I + Sbjct: 739 KLNSLMEMFEELLAEGRKILLFSQFTSMLSLIEEELKQRGIAYALLTGSTRDRR-TPIHD 797 Query: 104 WNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKR 163 + GK+P+ + G GLNL + ++ + WW+ Q +R + G + Sbjct: 798 FQSGKLPIFLISLKAGGTGLNLT-AADTVIHYDPWWNPAAENQATDRA-----YRIGQDK 851 Query: 164 AVFVYYLIAQNTIDELVLQRLRTKSTI 190 VFVY +IA+ T++E + + R KS + Sbjct: 852 PVFVYKMIARGTVEEKIQRLQREKSAL 878 >gi|289434930|ref|YP_003464802.1| helicase, Snf2 family [Listeria seeligeri serovar 1/2b str. SLCC3954] gi|289171174|emb|CBH27716.1| helicase, Snf2 family [Listeria seeligeri serovar 1/2b str. SLCC3954] Length = 1071 Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust. Identities = 34/141 (24%), Positives = 64/141 (45%), Gaps = 16/141 (11%) Query: 65 KANAAPIIVAYHFNSDLARLQKAFPQ-GRTL----DKDPC-----TIQEWNEGKIPLLFA 114 + N +++ F LA +++ + G+T K P + +NEG+ + Sbjct: 910 RENGKRLLIFSQFTGMLAIIRRKLEEDGQTFFYMDGKTPAKTRLDMVNSFNEGENDIFLI 969 Query: 115 HPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQN 174 + G GLNL G + ++ + LWW+ +E R + G KR V V+ +I + Sbjct: 970 SLKAGGTGLNL-VGADTVILYDLWWN-----PAVEEQATGRAHRIGQKRVVQVFRMITKG 1023 Query: 175 TIDELVLQRLRTKSTIQDLLL 195 TI+E + + + K + D L+ Sbjct: 1024 TIEERIFELQKKKQALVDELI 1044 >gi|289648568|ref|ZP_06479911.1| helicase/SNF2 domain-containing protein [Pseudomonas syringae pv. aesculi str. 2250] Length = 914 Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust. Identities = 37/147 (25%), Positives = 68/147 (46%), Gaps = 18/147 (12%) Query: 55 KIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQ---------GRTLDKDPCTIQE 103 K+ +L + E+ A I++ F S L+ +++ Q G T D+ I + Sbjct: 739 KLNSLMEMFEELLAEGRKILLFSQFTSMLSLIEEELKQRGIAYALLTGSTRDRR-TPIHD 797 Query: 104 WNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKR 163 + GK+P+ + G GLNL + ++ + WW+ Q +R + G + Sbjct: 798 FQSGKLPIFLISLKAGGTGLNLT-AADTVIHYDPWWNPAAENQATDRA-----YRIGQDK 851 Query: 164 AVFVYYLIAQNTIDELVLQRLRTKSTI 190 VFVY +IA+ T++E + + R KS + Sbjct: 852 PVFVYKMIARGTVEEKIQRLQREKSAL 878 >gi|330944324|gb|EGH46382.1| SNF2-related:helicase [Pseudomonas syringae pv. pisi str. 1704B] Length = 468 Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust. Identities = 40/162 (24%), Positives = 73/162 (45%), Gaps = 18/162 (11%) Query: 40 VYYDEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQ------- 90 V D + K+ K+ +L + E+ A I++ F S L+ +++ Q Sbjct: 309 VNQDMPVNSKQGTSGKLNSLMEMFEELLAEGRKILLFSQFTSMLSLIEEELKQRGIAYAL 368 Query: 91 --GRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMI 148 G T D+ I ++ GK+P+ + G GLNL + ++ + WW+ Q Sbjct: 369 LTGSTRDRR-TPIHDFQSGKLPIFLISLKAGGTGLNLT-AADTVIHYDPWWNPAAENQAT 426 Query: 149 ERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 + R + G + VFVY +IA+ T++E + + R KS + Sbjct: 427 D-----RAYRIGQDKPVFVYKMIARGTVEEKIQRLQREKSAL 463 >gi|320329151|gb|EFW85148.1| helicase/SNF2 domain-containing protein [Pseudomonas syringae pv. glycinea str. race 4] Length = 914 Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust. Identities = 38/154 (24%), Positives = 71/154 (46%), Gaps = 18/154 (11%) Query: 55 KIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQ---------GRTLDKDPCTIQE 103 K+ +L + E+ A I++ F S L+ +++ Q G T D+ I + Sbjct: 739 KLNSLMEMFEELLAEGRKILLFSQFTSMLSLIEEELKQRGIAYALLTGSTRDRR-TPIHD 797 Query: 104 WNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKR 163 + GK+P+ + G GLNL + ++ + WW+ Q +R + G + Sbjct: 798 FQSGKLPIFLISLKAGGTGLNLT-AADTVIHYDPWWNPAAENQATDRA-----YRIGQDK 851 Query: 164 AVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 VFVY +IA+ T++E + + R KS + +L+ Sbjct: 852 PVFVYKMIARGTVEEKIQRLQREKSALAAGVLDG 885 >gi|323530052|ref|YP_004232204.1| SNF2-like protein [Burkholderia sp. CCGE1001] gi|323387054|gb|ADX59144.1| SNF2-related protein [Burkholderia sp. CCGE1001] Length = 1175 Score = 47.4 bits (111), Expect = 0.001, Method: Composition-based stats. Identities = 26/96 (27%), Positives = 48/96 (50%), Gaps = 6/96 (6%) Query: 101 IQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 ++ + GK+PL + G GLNL + ++ + WW+ Q +R + G Sbjct: 1058 VERFQHGKVPLFLISLKAGGVGLNLT-AADTVIHYDPWWNPAAENQATDR-----AHRLG 1111 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + VFVY LIA +I+E +++ K+ + D +L+ Sbjct: 1112 QDKPVFVYKLIAAGSIEEKIVELQEQKAGLADSILS 1147 >gi|320324786|gb|EFW80858.1| helicase/SNF2 domain-containing protein [Pseudomonas syringae pv. glycinea str. B076] gi|330986243|gb|EGH84346.1| helicase/SNF2 domain-containing protein [Pseudomonas syringae pv. lachrymans str. M301315] gi|331013173|gb|EGH93229.1| helicase/SNF2 domain-containing protein [Pseudomonas syringae pv. tabaci ATCC 11528] Length = 914 Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust. Identities = 37/147 (25%), Positives = 68/147 (46%), Gaps = 18/147 (12%) Query: 55 KIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQ---------GRTLDKDPCTIQE 103 K+ +L + E+ A I++ F S L+ +++ Q G T D+ I + Sbjct: 739 KLNSLMEMFEELLAEGRKILLFSQFTSMLSLIEEELKQRGIAYALLTGSTRDRR-TPIHD 797 Query: 104 WNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKR 163 + GK+P+ + G GLNL + ++ + WW+ Q +R + G + Sbjct: 798 FQSGKLPIFLISLKAGGTGLNLT-AADTVIHYDPWWNPAAENQATDRA-----YRIGQDK 851 Query: 164 AVFVYYLIAQNTIDELVLQRLRTKSTI 190 VFVY +IA+ T++E + + R KS + Sbjct: 852 PVFVYKMIARGTVEEKIQRLQREKSAL 878 >gi|71733698|ref|YP_274080.1| helicase/SNF2 domain-containing protein [Pseudomonas syringae pv. phaseolicola 1448A] gi|71554251|gb|AAZ33462.1| helicase/SNF2 family domain protein [Pseudomonas syringae pv. phaseolicola 1448A] Length = 914 Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust. Identities = 37/147 (25%), Positives = 68/147 (46%), Gaps = 18/147 (12%) Query: 55 KIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQ---------GRTLDKDPCTIQE 103 K+ +L + E+ A I++ F S L+ +++ Q G T D+ I + Sbjct: 739 KLNSLMEMFEELLAEGRKILLFSQFTSMLSLIEEELKQRGIAYALLTGSTRDRR-TPIHD 797 Query: 104 WNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKR 163 + GK+P+ + G GLNL + ++ + WW+ Q +R + G + Sbjct: 798 FQSGKLPIFLISLKAGGTGLNLT-AADTVIHYDPWWNPAAENQATDRA-----YRIGQDK 851 Query: 164 AVFVYYLIAQNTIDELVLQRLRTKSTI 190 VFVY +IA+ T++E + + R KS + Sbjct: 852 PVFVYKMIARGTVEEKIQRLQREKSAL 878 >gi|301633331|gb|ADK86885.1| SNF2 family N-terminal domain protein [Mycoplasma pneumoniae FH] Length = 1030 Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust. Identities = 31/100 (31%), Positives = 53/100 (53%), Gaps = 13/100 (13%) Query: 101 IQEWNEGKIP-LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQA 159 I+++N K P +L A + G G+NL +++ F +WW+ +E R + Sbjct: 921 IEKFNNAKNPCVLLASLKAGGVGINLT-AAEVVIHFDVWWN-----TAVENQATDRAHRI 974 Query: 160 GFKRAVFVYYLIAQNTIDELVL------QRLRTKSTIQDL 193 G K+ V VY +IA+NTI+E V Q L +K+ ++D+ Sbjct: 975 GQKKTVQVYRIIAKNTIEERVCQVQAEKQELVSKTLVEDV 1014 >gi|13507759|ref|NP_109708.1| helicases [Mycoplasma pneumoniae M129] gi|2493354|sp|P75093|Y020_MYCPN RecName: Full=Uncharacterized ATP-dependent helicase MPN_020 gi|1673793|gb|AAB95782.1| helicase-like protein [Mycoplasma pneumoniae M129] Length = 1030 Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust. Identities = 31/100 (31%), Positives = 53/100 (53%), Gaps = 13/100 (13%) Query: 101 IQEWNEGKIP-LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQA 159 I+++N K P +L A + G G+NL +++ F +WW+ +E R + Sbjct: 921 IEKFNNAKNPCVLLASLKAGGVGINLT-AAEVVIHFDVWWN-----TAVENQATDRAHRI 974 Query: 160 GFKRAVFVYYLIAQNTIDELVL------QRLRTKSTIQDL 193 G K+ V VY +IA+NTI+E V Q L +K+ ++D+ Sbjct: 975 GQKKTVQVYRIIAKNTIEERVCQVQAEKQELVSKTLVEDV 1014 >gi|313623518|gb|EFR93710.1| SNF2 family helicase [Listeria innocua FSL J1-023] Length = 650 Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust. Identities = 35/141 (24%), Positives = 64/141 (45%), Gaps = 16/141 (11%) Query: 65 KANAAPIIVAYHFNSDLARLQKAFPQ-GRTL----DKDPC-----TIQEWNEGKIPLLFA 114 + N I++ F LA +++ + G++L K P + +NEG+ + Sbjct: 488 RENGKRILIFSQFTGMLAIIRRKLEEDGQSLFYMDGKTPAKTRLDMVNAFNEGENDIFLI 547 Query: 115 HPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQN 174 + G GLNL G + ++ + LWW+ +E R + G KR V V+ +I + Sbjct: 548 SLKAGGTGLNL-VGADTVILYDLWWN-----PAVEEQATGRAHRIGQKRVVQVFRMITKG 601 Query: 175 TIDELVLQRLRTKSTIQDLLL 195 TI+E + + K + D L+ Sbjct: 602 TIEERIFDLQKKKQALVDELI 622 >gi|77361962|ref|YP_341536.1| helicase domain-containing protein [Pseudoalteromonas haloplanktis TAC125] gi|76876873|emb|CAI89090.1| putative protein with helicase domain [Pseudoalteromonas haloplanktis TAC125] Length = 1351 Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust. Identities = 30/97 (30%), Positives = 47/97 (48%), Gaps = 6/97 (6%) Query: 101 IQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 + ++ G+ PL + G GLNL + ++ WW+ +E+ R + G Sbjct: 1242 VDKFQAGEAPLFLISLKAGGTGLNLT-AADYVLHLDPWWN-----PAVEQQASDRAHRLG 1295 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 R V VY LIAQNTI+E +LQ K + D +L+ Sbjct: 1296 QTRPVTVYRLIAQNTIEEKILQLHEHKQALADKVLSG 1332 >gi|71008587|ref|XP_758230.1| hypothetical protein UM02083.1 [Ustilago maydis 521] gi|46097848|gb|EAK83081.1| hypothetical protein UM02083.1 [Ustilago maydis 521] Length = 870 Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust. Identities = 34/114 (29%), Positives = 55/114 (48%), Gaps = 8/114 (7%) Query: 93 TLDKDPCTIQEWN--EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 T++K + +N EGK + + G GLNL G N LV F W+ QQ + R Sbjct: 680 TINKRQKLVDRFNDPEGKEFIFLLSSKAGGCGLNL-IGANRLVLFDPDWNPASDQQALAR 738 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIH 204 + + G K++ FVY IA +I+E +LQR K ++ +++ + H Sbjct: 739 VW-----RDGQKKSCFVYRFIATGSIEEKILQRQSHKQSLSSCVVDEAQDAARH 787 >gi|91793580|ref|YP_563231.1| SNF2-related [Shewanella denitrificans OS217] gi|91715582|gb|ABE55508.1| SNF2-related [Shewanella denitrificans OS217] Length = 1088 Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust. Identities = 29/96 (30%), Positives = 46/96 (47%), Gaps = 6/96 (6%) Query: 101 IQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 I ++ EG+ P+ + G GLNL + + F WW+ ER R + G Sbjct: 980 IDDFQEGRKPVFLISLKAGGTGLNLTTADTV-IHFDPWWN-----PAAERQATDRAHRIG 1033 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 VFVY LIAQ T++E + + + K + D +L+ Sbjct: 1034 QLNPVFVYKLIAQGTVEEKIHEMQQHKQGLADSILS 1069 >gi|257069450|ref|YP_003155705.1| DNA/RNA helicase, superfamily II, SNF2 family [Brachybacterium faecium DSM 4810] gi|256560268|gb|ACU86115.1| DNA/RNA helicase, superfamily II, SNF2 family [Brachybacterium faecium DSM 4810] Length = 1110 Score = 47.4 bits (111), Expect = 0.001, Method: Composition-based stats. Identities = 35/121 (28%), Positives = 56/121 (46%), Gaps = 9/121 (7%) Query: 79 SDLAR--LQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFS 136 S+L R ++ A G T D+D + + EG P+ + G GL L + + Sbjct: 979 SELERREVRYAHLDGSTRDRD-AAVAGFREGDAPVFLISLKAGGFGLTLTEADYVFLL-D 1036 Query: 137 LWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 WW+ Q ++R + G R V VY +IA++TI+E VL R K+ + D L + Sbjct: 1037 PWWNPAAENQAVDR-----AHRIGQDRTVMVYRMIAEDTIEEKVLALQRRKAELFDALTD 1091 Query: 197 A 197 Sbjct: 1092 G 1092 >gi|160874619|ref|YP_001553935.1| non-specific serine/threonine protein kinase [Shewanella baltica OS195] gi|160860141|gb|ABX48675.1| Non-specific serine/threonine protein kinase [Shewanella baltica OS195] gi|315266860|gb|ADT93713.1| SNF2-related protein [Shewanella baltica OS678] Length = 1073 Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust. Identities = 28/102 (27%), Positives = 50/102 (49%), Gaps = 6/102 (5%) Query: 101 IQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 I ++ EG P+ + G GLNL + ++ + WW+ +Q +R + G Sbjct: 965 IDKFQEGDTPVFLISLKAGGTGLNLT-AADTVIHYDPWWNPAAEKQATDR-----AHRIG 1018 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKET 202 + VFVY LIA+ T++E + + + K ++ D +L K T Sbjct: 1019 QDKPVFVYKLIAEGTVEEKIQEMQQHKQSLADSILEGKGKGT 1060 >gi|163791108|ref|ZP_02185528.1| Snf2 family protein [Carnobacterium sp. AT7] gi|159873664|gb|EDP67748.1| Snf2 family protein [Carnobacterium sp. AT7] Length = 1075 Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust. Identities = 37/142 (26%), Positives = 65/142 (45%), Gaps = 16/142 (11%) Query: 65 KANAAPIIVAYHFNSDLARLQKAFPQ---------GRTLDKDPC-TIQEWNEGKIPLLFA 114 + N I++ F S LA ++K Q G+T K+ + +N G+ + Sbjct: 915 RENGRRILIFSQFTSMLAIIEKELAQQSVETFYLSGQTKPKERIEMVNRFNAGEKEVFLI 974 Query: 115 HPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQN 174 + G GLNL G ++++ + LWW+ +E R + G K+ V V LIA+ Sbjct: 975 SLKAGGTGLNLT-GADMVILYDLWWN-----PAVEEQAAGRAHRIGQKKVVQVLRLIAEG 1028 Query: 175 TIDELVLQRLRTKSTIQDLLLN 196 TI+E + Q + K + D ++ Sbjct: 1029 TIEEKIDQLQQEKKALFDQIIT 1050 >gi|125543874|gb|EAY90013.1| hypothetical protein OsI_11583 [Oryza sativa Indica Group] Length = 1411 Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust. Identities = 26/91 (28%), Positives = 50/91 (54%), Gaps = 6/91 (6%) Query: 105 NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA 164 N I + + G G+NL + ++F+ + W+ + QQ ++R + G + Sbjct: 1157 NRNDIFVFLLSTRAGGLGINLT-AADTVIFYEIDWNPTQDQQAMDRT-----HRLGQTKE 1210 Query: 165 VFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 V VY LI ++TI+E +LQR + K+ +Q+L++ Sbjct: 1211 VTVYRLICKDTIEEKILQRAKQKNAVQELVM 1241 >gi|108708155|gb|ABF95950.1| transcriptional activator, putative, expressed [Oryza sativa Japonica Group] Length = 1457 Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust. Identities = 26/91 (28%), Positives = 50/91 (54%), Gaps = 6/91 (6%) Query: 105 NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA 164 N I + + G G+NL + ++F+ + W+ + QQ ++R + G + Sbjct: 1203 NRNDIFVFLLSTRAGGLGINLT-AADTVIFYEIDWNPTQDQQAMDRT-----HRLGQTKE 1256 Query: 165 VFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 V VY LI ++TI+E +LQR + K+ +Q+L++ Sbjct: 1257 VTVYRLICKDTIEEKILQRAKQKNAVQELVM 1287 >gi|16803684|ref|NP_465169.1| hypothetical protein lmo1644 [Listeria monocytogenes EGD-e] gi|16411080|emb|CAC99722.1| lmo1644 [Listeria monocytogenes EGD-e] Length = 1072 Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust. Identities = 26/95 (27%), Positives = 47/95 (49%), Gaps = 6/95 (6%) Query: 101 IQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 + +NEG+ + + G GLNL G + ++ + LWW+ +E R + G Sbjct: 956 VNAFNEGENDIFLISLKAGGTGLNL-VGADTVILYDLWWN-----PAVEEQATGRAHRIG 1009 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 KR V V+ +I + TI+E + + + K + D L+ Sbjct: 1010 QKRVVQVFRMITKGTIEERIFELQKKKQALVDELI 1044 >gi|284802036|ref|YP_003413901.1| hypothetical protein LM5578_1791 [Listeria monocytogenes 08-5578] gi|284995178|ref|YP_003416946.1| hypothetical protein LM5923_1743 [Listeria monocytogenes 08-5923] gi|284057598|gb|ADB68539.1| hypothetical protein LM5578_1791 [Listeria monocytogenes 08-5578] gi|284060645|gb|ADB71584.1| hypothetical protein LM5923_1743 [Listeria monocytogenes 08-5923] Length = 1072 Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust. Identities = 26/95 (27%), Positives = 47/95 (49%), Gaps = 6/95 (6%) Query: 101 IQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 + +NEG+ + + G GLNL G + ++ + LWW+ +E R + G Sbjct: 956 VNAFNEGENDIFLISLKAGGTGLNL-VGADTVILYDLWWN-----PAVEEQATGRAHRIG 1009 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 KR V V+ +I + TI+E + + + K + D L+ Sbjct: 1010 QKRVVQVFRMITKGTIEERIFELQKKKQALVDELI 1044 >gi|313112827|ref|ZP_07798474.1| protein, SNF2 family [Faecalibacterium cf. prausnitzii KLE1255] gi|310624897|gb|EFQ08205.1| protein, SNF2 family [Faecalibacterium cf. prausnitzii KLE1255] Length = 1100 Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust. Identities = 49/187 (26%), Positives = 86/187 (45%), Gaps = 28/187 (14%) Query: 9 RELYCD--LQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKA 66 RE+ CD L +N + ++K C++L AV E H + + LE++ ++ Sbjct: 913 REICCDPRLVADNWDG--GSAKLDACMELVTAAV---EGGHRILLFSQFTSMLELLAKRL 967 Query: 67 NAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQ 126 + A + HF LQ + P+ + ++ +N G+ + + G GLNL Sbjct: 968 DEAGV---SHFT-----LQGSTPKPVRAE----LVRRFNSGEADVFLISLRAGGTGLNLT 1015 Query: 127 YGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRT 186 +I++ + WW++ Q +R QR V VY LIAQ+TI+E +++ + Sbjct: 1016 -AADIVIHYDPWWNVAAQNQATDRAYRIGQRNP-----VQVYKLIAQDTIEEKIVELQQA 1069 Query: 187 KSTIQDL 193 K QDL Sbjct: 1070 K---QDL 1073 >gi|152999998|ref|YP_001365679.1| non-specific serine/threonine protein kinase [Shewanella baltica OS185] gi|151364616|gb|ABS07616.1| Non-specific serine/threonine protein kinase [Shewanella baltica OS185] Length = 1073 Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust. Identities = 28/102 (27%), Positives = 50/102 (49%), Gaps = 6/102 (5%) Query: 101 IQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 I ++ EG P+ + G GLNL + ++ + WW+ +Q +R + G Sbjct: 965 IDKFQEGDTPVFLISLKAGGTGLNLT-AADTVIHYDPWWNPAAEKQATDR-----AHRIG 1018 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKET 202 + VFVY LIA+ T++E + + + K ++ D +L K T Sbjct: 1019 QDKPVFVYKLIAEGTVEEKIQEMQQHKQSLADSILEGKGKGT 1060 >gi|47096999|ref|ZP_00234573.1| helicase, Snf2 family [Listeria monocytogenes str. 1/2a F6854] gi|254898188|ref|ZP_05258112.1| hypothetical protein LmonJ_00195 [Listeria monocytogenes J0161] gi|254912319|ref|ZP_05262331.1| helicase [Listeria monocytogenes J2818] gi|254936646|ref|ZP_05268343.1| helicase [Listeria monocytogenes F6900] gi|47014621|gb|EAL05580.1| helicase, Snf2 family [Listeria monocytogenes str. 1/2a F6854] gi|258609243|gb|EEW21851.1| helicase [Listeria monocytogenes F6900] gi|293590301|gb|EFF98635.1| helicase [Listeria monocytogenes J2818] Length = 1072 Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust. Identities = 26/95 (27%), Positives = 47/95 (49%), Gaps = 6/95 (6%) Query: 101 IQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 + +NEG+ + + G GLNL G + ++ + LWW+ +E R + G Sbjct: 956 VNAFNEGENDIFLISLKAGGTGLNL-VGADTVILYDLWWN-----PAVEEQATGRAHRIG 1009 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 KR V V+ +I + TI+E + + + K + D L+ Sbjct: 1010 QKRVVQVFRMITKGTIEERIFELQKKKQALVDELI 1044 >gi|302671400|ref|YP_003831360.1| helicase SNF2 family [Butyrivibrio proteoclasticus B316] gi|302395873|gb|ADL34778.1| helicase SNF2 family [Butyrivibrio proteoclasticus B316] Length = 1034 Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust. Identities = 29/97 (29%), Positives = 45/97 (46%), Gaps = 6/97 (6%) Query: 101 IQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 + + E P+ + G GLNL +I++ + WW++ +E R + G Sbjct: 926 VDAFQEDDTPVFCISLKAGGTGLNLT-AADIVIHYDHWWNI-----AVENQATDRAHRIG 979 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 K V VY LI QNTI+E ++ K + D LLN Sbjct: 980 QKNVVTVYRLIMQNTIEERIILLQNKKKELADQLLNT 1016 >gi|254832046|ref|ZP_05236701.1| hypothetical protein Lmon1_11855 [Listeria monocytogenes 10403S] Length = 1072 Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust. Identities = 26/95 (27%), Positives = 47/95 (49%), Gaps = 6/95 (6%) Query: 101 IQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 + +NEG+ + + G GLNL G + ++ + LWW+ +E R + G Sbjct: 956 VNAFNEGENDIFLISLKAGGTGLNL-VGADTVILYDLWWN-----PAVEEQATGRAHRIG 1009 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 KR V V+ +I + TI+E + + + K + D L+ Sbjct: 1010 QKRVVQVFRMITKGTIEERIFELQKKKQALVDELI 1044 >gi|116873076|ref|YP_849857.1| DNA/RNA helicase protein [Listeria welshimeri serovar 6b str. SLCC5334] gi|116741954|emb|CAK21078.1| DNA/RNA helicase protein [Listeria welshimeri serovar 6b str. SLCC5334] Length = 1072 Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust. Identities = 35/141 (24%), Positives = 63/141 (44%), Gaps = 16/141 (11%) Query: 65 KANAAPIIVAYHFNSDLARLQKAFPQ-GRTL----DKDPC-----TIQEWNEGKIPLLFA 114 + N I++ F LA +++ + G +L K P + +NEG+ + Sbjct: 910 RENGKRILIFSQFTGMLAIIRRKLEEEGHSLFYMDGKTPAKTRLDMVNAFNEGENDIFLI 969 Query: 115 HPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQN 174 + G GLNL G + ++ + LWW+ +E R + G KR V V+ +I + Sbjct: 970 SLKAGGTGLNL-VGADTVILYDLWWN-----PAVEEQATGRAHRIGQKRVVQVFRMITKG 1023 Query: 175 TIDELVLQRLRTKSTIQDLLL 195 TI+E + + K + D L+ Sbjct: 1024 TIEERIFDLQKKKQALVDELI 1044 >gi|304409583|ref|ZP_07391203.1| SNF2-related protein [Shewanella baltica OS183] gi|307303941|ref|ZP_07583694.1| SNF2-related protein [Shewanella baltica BA175] gi|304352101|gb|EFM16499.1| SNF2-related protein [Shewanella baltica OS183] gi|306912839|gb|EFN43262.1| SNF2-related protein [Shewanella baltica BA175] Length = 1073 Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust. Identities = 28/102 (27%), Positives = 50/102 (49%), Gaps = 6/102 (5%) Query: 101 IQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 I ++ EG P+ + G GLNL + ++ + WW+ +Q +R + G Sbjct: 965 IDKFQEGDTPVFLISLKAGGTGLNLT-AADTVIHYDPWWNPAAEKQATDR-----AHRIG 1018 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKET 202 + VFVY LIA+ T++E + + + K ++ D +L K T Sbjct: 1019 QDKPVFVYKLIAEGTVEEKIQEMQQHKQSLADSILEGKGKGT 1060 >gi|217974039|ref|YP_002358790.1| Non-specific serine/threonine protein kinase [Shewanella baltica OS223] gi|217499174|gb|ACK47367.1| Non-specific serine/threonine protein kinase [Shewanella baltica OS223] Length = 1073 Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust. Identities = 28/102 (27%), Positives = 50/102 (49%), Gaps = 6/102 (5%) Query: 101 IQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 I ++ EG P+ + G GLNL + ++ + WW+ +Q +R + G Sbjct: 965 IDKFQEGDTPVFLISLKAGGTGLNLT-AADTVIHYDPWWNPAAEKQATDR-----AHRIG 1018 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKET 202 + VFVY LIA+ T++E + + + K ++ D +L K T Sbjct: 1019 QDKPVFVYKLIAEGTVEEKIQEMQQHKQSLADSILEGKGKGT 1060 >gi|126173709|ref|YP_001049858.1| non-specific serine/threonine protein kinase [Shewanella baltica OS155] gi|125996914|gb|ABN60989.1| SNF2-related protein [Shewanella baltica OS155] Length = 1073 Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust. Identities = 28/102 (27%), Positives = 50/102 (49%), Gaps = 6/102 (5%) Query: 101 IQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 I ++ EG P+ + G GLNL + ++ + WW+ +Q +R + G Sbjct: 965 IDKFQEGDTPVFLISLKAGGTGLNLT-AADTVIHYDPWWNPAAEKQATDR-----AHRIG 1018 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKET 202 + VFVY LIA+ T++E + + + K ++ D +L K T Sbjct: 1019 QDKPVFVYKLIAEGTVEEKIQEMQQHKQSLADSILEGKGKGT 1060 >gi|229828003|ref|ZP_04454072.1| hypothetical protein GCWU000342_00052 [Shuttleworthia satelles DSM 14600] gi|229792597|gb|EEP28711.1| hypothetical protein GCWU000342_00052 [Shuttleworthia satelles DSM 14600] Length = 1314 Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust. Identities = 25/97 (25%), Positives = 49/97 (50%), Gaps = 6/97 (6%) Query: 101 IQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 + +N+ + P+ + G GLNL G ++++ + WW+L Q +R + G Sbjct: 1206 VHAFNDDETPVFLISLKAGGTGLNLT-GADLVIHYDPWWNLAAQNQATDRA-----HRIG 1259 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + V V+ LIA+ TI++ +L+ K + D +L+ Sbjct: 1260 QTKDVSVFRLIAKGTIEDRILEMQEKKKDLADAILSG 1296 >gi|125586260|gb|EAZ26924.1| hypothetical protein OsJ_10853 [Oryza sativa Japonica Group] Length = 1396 Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust. Identities = 26/93 (27%), Positives = 50/93 (53%), Gaps = 6/93 (6%) Query: 105 NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA 164 N I + + G G+NL + ++F+ + W+ + QQ ++R + G + Sbjct: 1203 NRNDIFVFLLSTRAGGLGINLT-AADTVIFYEIDWNPTQDQQAMDRT-----HRLGQTKE 1256 Query: 165 VFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 V VY LI ++TI+E +LQR + K+ +Q+L++ Sbjct: 1257 VTVYRLICKDTIEEKILQRAKQKNAVQELVMKG 1289 >gi|242040921|ref|XP_002467855.1| hypothetical protein SORBIDRAFT_01g035270 [Sorghum bicolor] gi|241921709|gb|EER94853.1| hypothetical protein SORBIDRAFT_01g035270 [Sorghum bicolor] Length = 1478 Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust. Identities = 24/78 (30%), Positives = 46/78 (58%), Gaps = 6/78 (7%) Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 G G+NL + ++F+ + W+ + QQ ++R + G + V VY LI ++TI+E Sbjct: 1232 GLGINLT-AADTVIFYEIDWNPTQDQQAMDRT-----HRLGQTKEVTVYRLICKDTIEEK 1285 Query: 180 VLQRLRTKSTIQDLLLNA 197 +LQR + K+ +Q+L++ Sbjct: 1286 ILQRAKQKNAVQELVMKG 1303 >gi|313632979|gb|EFR99905.1| DNA/RNA helicase protein [Listeria seeligeri FSL N1-067] Length = 1071 Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust. Identities = 34/141 (24%), Positives = 63/141 (44%), Gaps = 16/141 (11%) Query: 65 KANAAPIIVAYHFNSDLARLQKAFPQ-GRTL----DKDPC-----TIQEWNEGKIPLLFA 114 + N +++ F LA +++ + G+T K P + +NEG+ + Sbjct: 910 RENGKRLLIFSQFTGMLAIIRRKLEEDGQTFFYMDGKTPAKTRLDMVNSFNEGENDIFLI 969 Query: 115 HPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQN 174 + G GLNL G + ++ + LWW+ +E R + G KR V V+ +I + Sbjct: 970 SLKAGGTGLNL-VGADTVILYDLWWN-----PAVEEQATGRAHRIGQKRVVQVFRMITKG 1023 Query: 175 TIDELVLQRLRTKSTIQDLLL 195 TI+E + + K + D L+ Sbjct: 1024 TIEERIFDLQKKKQALVDELI 1044 >gi|310827837|ref|YP_003960194.1| HepA/SNF2 family protein [Eubacterium limosum KIST612] gi|308739571|gb|ADO37231.1| HepA/SNF2 family protein [Eubacterium limosum KIST612] Length = 1029 Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust. Identities = 25/95 (26%), Positives = 49/95 (51%), Gaps = 6/95 (6%) Query: 101 IQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 + +NE P+ + G GLNL G ++++ + WW+L Q +R + G Sbjct: 921 VNAFNEDDTPVFLISLKAGGTGLNLT-GADVVIHYDPWWNLSAQNQATDR-----AHRIG 974 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 +V VY LIA+++I+E + + + K+ + D ++ Sbjct: 975 QTNSVQVYNLIAKDSIEEKIQKMQQAKAELADSII 1009 >gi|330808509|ref|YP_004352971.1| Putative non-specific serine/threonine protein [Pseudomonas brassicacearum subsp. brassicacearum NFM421] gi|327376617|gb|AEA67967.1| Putative non-specific serine/threonine protein [Pseudomonas brassicacearum subsp. brassicacearum NFM421] Length = 1096 Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust. Identities = 30/107 (28%), Positives = 50/107 (46%), Gaps = 7/107 (6%) Query: 91 GRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 G T D+ ++E+ GK+ L + G GLNL + ++ F WW+ +E Sbjct: 974 GSTTDRR-TPVREFQSGKVSLFLISLKAGGTGLNLT-AADTVIHFDPWWN-----PAVEN 1026 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 R + G + VFVY LIA+ T++E + K+ + LL+ Sbjct: 1027 QATDRAYRIGQNKPVFVYKLIARGTVEEKIQALQEDKAALAGSLLDG 1073 >gi|242280237|ref|YP_002992366.1| SNF2-related protein [Desulfovibrio salexigens DSM 2638] gi|242123131|gb|ACS80827.1| SNF2-related protein [Desulfovibrio salexigens DSM 2638] Length = 1069 Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust. Identities = 29/97 (29%), Positives = 47/97 (48%), Gaps = 9/97 (9%) Query: 109 IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVY 168 IP+ + G GLNL + ++ + WW+ +E R + G KR VF Y Sbjct: 969 IPIFLISLKAGGTGLNLT-SADYVIHYDPWWN-----PAVENQATDRTHRIGQKRQVFAY 1022 Query: 169 YLIAQNTIDELVLQRLRTKSTIQDLLL---NALKKET 202 +I QNT++E +L K ++ D ++ +ALK T Sbjct: 1023 KMICQNTVEEKILGLQEMKKSVADAIIPGQSALKSLT 1059 >gi|222528088|ref|YP_002571970.1| non-specific serine/threonine protein kinase [Caldicellulosiruptor bescii DSM 6725] gi|222454935|gb|ACM59197.1| Non-specific serine/threonine protein kinase [Caldicellulosiruptor bescii DSM 6725] Length = 1112 Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust. Identities = 24/97 (24%), Positives = 52/97 (53%), Gaps = 6/97 (6%) Query: 101 IQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 + ++N G+ + + G GLNL G ++++ + LWW+ +E + R + G Sbjct: 1003 VNKFNSGQKQVFLVSLKAGGFGLNLT-GADVVILYDLWWN-----PAVENQAMDRAHRIG 1056 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + +V V+ LI +NTI+E + + + K + D ++++ Sbjct: 1057 QENSVQVFRLITRNTIEERIFELQQKKKDLFDSIVSS 1093 >gi|297203431|ref|ZP_06920828.1| SNF2/RAD54 family helicase [Streptomyces sviceus ATCC 29083] gi|297148407|gb|EFH28976.1| SNF2/RAD54 family helicase [Streptomyces sviceus ATCC 29083] Length = 297 Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust. Identities = 26/97 (26%), Positives = 48/97 (49%), Gaps = 6/97 (6%) Query: 101 IQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 + + G IP+L + G GLNL G++ V F WW+ +Q + R + G Sbjct: 184 VDRFQSGAIPVLVLSLKAAGTGLNLTRAGHV-VHFDRWWNPAVEEQATD-----RAYRIG 237 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + V V+ LI + T+++ + + L +K + D +L + Sbjct: 238 QTQPVQVHRLITEGTVEDRIAEMLESKRALADAILGS 274 >gi|254829448|ref|ZP_05234135.1| helicase [Listeria monocytogenes FSL N3-165] gi|258601864|gb|EEW15189.1| helicase [Listeria monocytogenes FSL N3-165] Length = 1072 Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust. Identities = 37/141 (26%), Positives = 62/141 (43%), Gaps = 16/141 (11%) Query: 65 KANAAPIIVAYHFNSDLARL-QKAFPQGRTL----DKDPC-----TIQEWNEGKIPLLFA 114 + N I++ F L + QK G+TL K P + +NEG+ + Sbjct: 910 RENGKRILLFSQFTGMLGIIRQKLEEDGQTLFYMDGKTPSKTRLDMVNAFNEGENDIFLI 969 Query: 115 HPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQN 174 + G GLNL G + ++ + LWW+ +E R + G KR V V+ +I + Sbjct: 970 SLKAGGTGLNL-VGADTVILYDLWWN-----PAVEEQATGRAHRIGQKRVVQVFRMITKG 1023 Query: 175 TIDELVLQRLRTKSTIQDLLL 195 TI+E + + K + D L+ Sbjct: 1024 TIEERIFDLQKKKQALVDELI 1044 >gi|313637601|gb|EFS03000.1| DNA/RNA helicase protein [Listeria seeligeri FSL S4-171] Length = 512 Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust. Identities = 34/141 (24%), Positives = 64/141 (45%), Gaps = 16/141 (11%) Query: 65 KANAAPIIVAYHFNSDLARLQKAFPQ-GRTL----DKDPC-----TIQEWNEGKIPLLFA 114 + N +++ F LA +++ + G+T K P + +NEG+ + Sbjct: 351 RENGKRLLIFSQFTGMLAIIRRKLEEDGQTFFYMDGKTPAKTRLDMVNSFNEGENDIFLI 410 Query: 115 HPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQN 174 + G GLNL G + ++ + LWW+ +E R + G KR V V+ +I + Sbjct: 411 SLKAGGTGLNL-VGADTVILYDLWWN-----PAVEEQATGRAHRIGQKRVVQVFRMITKG 464 Query: 175 TIDELVLQRLRTKSTIQDLLL 195 TI+E + + + K + D L+ Sbjct: 465 TIEERIFELQKKKQALVDELI 485 >gi|47093680|ref|ZP_00231434.1| helicase, Snf2 family [Listeria monocytogenes str. 4b H7858] gi|47017941|gb|EAL08720.1| helicase, Snf2 family [Listeria monocytogenes str. 4b H7858] gi|328465005|gb|EGF36284.1| SNF2 family helicase [Listeria monocytogenes 1816] Length = 1072 Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust. Identities = 37/141 (26%), Positives = 62/141 (43%), Gaps = 16/141 (11%) Query: 65 KANAAPIIVAYHFNSDLARL-QKAFPQGRTL----DKDPC-----TIQEWNEGKIPLLFA 114 + N I++ F L + QK G+TL K P + +NEG+ + Sbjct: 910 RENGKRILLFSQFTGMLGIIRQKLEEDGQTLFYMDGKTPSKTRLDMVNAFNEGENDIFLI 969 Query: 115 HPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQN 174 + G GLNL G + ++ + LWW+ +E R + G KR V V+ +I + Sbjct: 970 SLKAGGTGLNL-VGADTVILYDLWWN-----PAVEEQATGRAHRIGQKRVVQVFRMITKG 1023 Query: 175 TIDELVLQRLRTKSTIQDLLL 195 TI+E + + K + D L+ Sbjct: 1024 TIEERIFDLQKKKQALVDELI 1044 >gi|226224245|ref|YP_002758352.1| SNF2-type helicase [Listeria monocytogenes Clip81459] gi|225876707|emb|CAS05416.1| Putative SNF2-type helicase [Listeria monocytogenes serotype 4b str. CLIP 80459] Length = 1072 Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust. Identities = 37/141 (26%), Positives = 62/141 (43%), Gaps = 16/141 (11%) Query: 65 KANAAPIIVAYHFNSDLARL-QKAFPQGRTL----DKDPC-----TIQEWNEGKIPLLFA 114 + N I++ F L + QK G+TL K P + +NEG+ + Sbjct: 910 RENGKRILLFSQFTGMLGIIRQKLEEDGQTLFYMDGKTPSKTRLDMVNAFNEGENDIFLI 969 Query: 115 HPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQN 174 + G GLNL G + ++ + LWW+ +E R + G KR V V+ +I + Sbjct: 970 SLKAGGTGLNL-VGADTVILYDLWWN-----PAVEEQATGRAHRIGQKRVVQVFRMITKG 1023 Query: 175 TIDELVLQRLRTKSTIQDLLL 195 TI+E + + K + D L+ Sbjct: 1024 TIEERIFDLQKKKQALVDELI 1044 >gi|91778444|ref|YP_553652.1| putative helicase [Burkholderia xenovorans LB400] gi|91691104|gb|ABE34302.1| Putative helicase [Burkholderia xenovorans LB400] Length = 1150 Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats. Identities = 25/96 (26%), Positives = 49/96 (51%), Gaps = 6/96 (6%) Query: 101 IQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 ++ + +G++PL + G GLNL + ++ + WW+ Q +R + G Sbjct: 1033 VERFQQGEVPLFLISLKAGGVGLNLT-AADTVIHYDPWWNPAAENQATDR-----AHRLG 1086 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + VFVY LIA +I+E +++ K+ + D +L+ Sbjct: 1087 QDKPVFVYKLIAAGSIEEKIVELQEQKAGLADSILS 1122 >gi|46907873|ref|YP_014262.1| SNF2 family helicase [Listeria monocytogenes str. 4b F2365] gi|254931583|ref|ZP_05264942.1| helicase [Listeria monocytogenes HPB2262] gi|46881142|gb|AAT04439.1| helicase, Snf2 family [Listeria monocytogenes serotype 4b str. F2365] gi|293583138|gb|EFF95170.1| helicase [Listeria monocytogenes HPB2262] Length = 1072 Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust. Identities = 37/141 (26%), Positives = 62/141 (43%), Gaps = 16/141 (11%) Query: 65 KANAAPIIVAYHFNSDLARL-QKAFPQGRTL----DKDPC-----TIQEWNEGKIPLLFA 114 + N I++ F L + QK G+TL K P + +NEG+ + Sbjct: 910 RENGKRILLFSQFTGMLGIIRQKLEEDGQTLFYMDGKTPSKTRLDMVNAFNEGENDIFLI 969 Query: 115 HPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQN 174 + G GLNL G + ++ + LWW+ +E R + G KR V V+ +I + Sbjct: 970 SLKAGGTGLNL-VGADTVILYDLWWN-----PAVEEQATGRAHRIGQKRVVQVFRMITKG 1023 Query: 175 TIDELVLQRLRTKSTIQDLLL 195 TI+E + + K + D L+ Sbjct: 1024 TIEERIFDLQKKKQALVDELI 1044 >gi|16800753|ref|NP_471021.1| hypothetical protein lin1685 [Listeria innocua Clip11262] gi|16414172|emb|CAC96916.1| lin1685 [Listeria innocua Clip11262] Length = 1072 Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust. Identities = 35/141 (24%), Positives = 63/141 (44%), Gaps = 16/141 (11%) Query: 65 KANAAPIIVAYHFNSDLARLQKAFPQ-GRTL----DKDPC-----TIQEWNEGKIPLLFA 114 + N I++ F LA +++ + G+ L K P + +NEG+ + Sbjct: 910 RENGKRILIFSQFTGMLAIIRRKLEEDGQPLFYMDGKTPAKTRLDMVNAFNEGENDIFLI 969 Query: 115 HPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQN 174 + G GLNL G + ++ + LWW+ +E R + G KR V V+ +I + Sbjct: 970 SLKAGGTGLNL-VGADTVILYDLWWN-----PAVEEQATGRAHRIGQKRVVQVFRMITKG 1023 Query: 175 TIDELVLQRLRTKSTIQDLLL 195 TI+E + + K + D L+ Sbjct: 1024 TIEERIFDLQKKKQALVDELI 1044 >gi|296159842|ref|ZP_06842663.1| SNF2-related protein [Burkholderia sp. Ch1-1] gi|295889825|gb|EFG69622.1| SNF2-related protein [Burkholderia sp. Ch1-1] Length = 1150 Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats. Identities = 25/96 (26%), Positives = 49/96 (51%), Gaps = 6/96 (6%) Query: 101 IQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 ++ + +G++PL + G GLNL + ++ + WW+ Q +R + G Sbjct: 1033 VERFQQGEVPLFLISLKAGGVGLNLT-AADTVIHYDPWWNPAAENQATDR-----AHRLG 1086 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + VFVY LIA +I+E +++ K+ + D +L+ Sbjct: 1087 QDKPVFVYKLIAAGSIEEKIVELQEQKAGLADSILS 1122 >gi|156101331|ref|XP_001616359.1| helicase [Plasmodium vivax SaI-1] gi|148805233|gb|EDL46632.1| helicase, putative [Plasmodium vivax] Length = 877 Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust. Identities = 31/98 (31%), Positives = 48/98 (48%), Gaps = 11/98 (11%) Query: 105 NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWW---DLEEHQQMIERIGVTRQRQAGF 161 N+ + + +CG GLNL N +VF L+W + + + RIG T + Sbjct: 680 NDDHVKIALLSLTACGIGLNLT-AANTVVFGELYWVPGQIIQAEDRAHRIGTTHE----- 733 Query: 162 KRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 V ++YLIAQNTIDE+V + + K LN ++ Sbjct: 734 --VVNIHYLIAQNTIDEIVWKIINRKWNTLTTALNGME 769 >gi|325110937|ref|YP_004272005.1| SNF2-related protein [Planctomyces brasiliensis DSM 5305] gi|324971205|gb|ADY61983.1| SNF2-related protein [Planctomyces brasiliensis DSM 5305] Length = 1120 Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust. Identities = 34/125 (27%), Positives = 54/125 (43%), Gaps = 8/125 (6%) Query: 72 IVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNI 131 IV H D A + + G T D+D N+ IP+ + G GLNL + Sbjct: 985 IVKNHL--DKANIPYVYLDGSTKDRDAVVQTFQNDKDIPVFLISLKAGGLGLNLT-AADY 1041 Query: 132 LVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQ 191 + WW+ +E + R + G R V Y LIA+ TI+E + + + K + Sbjct: 1042 VFLLDPWWN-----PAVEAQAIDRAHRVGQTRNVIAYRLIARGTIEEKIAELQQNKRKLA 1096 Query: 192 DLLLN 196 D +L+ Sbjct: 1097 DAILS 1101 >gi|261854732|ref|YP_003262015.1| SNF2-related protein [Halothiobacillus neapolitanus c2] gi|261835201|gb|ACX94968.1| SNF2-related protein [Halothiobacillus neapolitanus c2] Length = 1086 Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust. Identities = 36/139 (25%), Positives = 64/139 (46%), Gaps = 22/139 (15%) Query: 71 IIVAYHFNSDLARLQKAFPQ---------GRTLDKDPCTIQEWNEGKIPLLFAHPASCGH 121 I+V F S LA + +A + G T D++ ++++ G P+ + G Sbjct: 935 ILVFSQFTSMLALISEALTKAKLAHSMLTGETRDRE-TVVRQFQNGDTPVFLISLKAGGV 993 Query: 122 GLNLQYGGNILVFFSLWWDLEEHQQMIER---IGVTRQRQAGFKRAVFVYYLIAQNTIDE 178 GLNL + ++ + WW+ Q +R IG TRQ VFVY L+ + +I+E Sbjct: 994 GLNLT-AADTVIHYDPWWNPAAEDQATDRAHRIGQTRQ--------VFVYKLVTEGSIEE 1044 Query: 179 LVLQRLRTKSTIQDLLLNA 197 +L K+ + + +L+ Sbjct: 1045 KILALQDKKAKLAEGVLSG 1063 >gi|270208570|ref|YP_003329341.1| putative helicase [Sinorhizobium meliloti] gi|76880844|gb|ABA56014.1| putative helicase [Sinorhizobium meliloti] Length = 1126 Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats. Identities = 35/132 (26%), Positives = 62/132 (46%), Gaps = 17/132 (12%) Query: 57 KALEVIIEKANAA-PIIVAYHFNS---------DLARLQKAFPQGRTLDKDPCTIQEWNE 106 + +E++ E A+ +IV F S D A + A G T+D+ ++ + Sbjct: 965 RLMELVGELADEGRKVIVFSQFTSMLDLIRRRLDDADIAYALLTGDTVDRG-TQVESFQH 1023 Query: 107 GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVF 166 G +P+ + G GLNL + ++ + WW+ +Q I+R + G + VF Sbjct: 1024 GTMPVFLISLKAGGVGLNLT-AADTVILYDPWWNPAVEEQAIDR-----AHRIGQDKPVF 1077 Query: 167 VYYLIAQNTIDE 178 VY L+A +TI+E Sbjct: 1078 VYRLVAADTIEE 1089 >gi|303388827|ref|XP_003072647.1| Mot1 helicase-like protein [Encephalitozoon intestinalis ATCC 50506] gi|303301788|gb|ADM11287.1| Mot1 helicase-like protein [Encephalitozoon intestinalis ATCC 50506] Length = 1257 Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust. Identities = 50/186 (26%), Positives = 79/186 (42%), Gaps = 28/186 (15%) Query: 13 CDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDE--KIKALEVIIEKANA-- 68 DL+ I+ N K + L LA + H+K+ + K+KALE II Sbjct: 1046 VDLEYGKIDQKNVGFKRTRDLLLAVSHM-----SHFKDSSEVSCKVKALEDIISLCGGED 1100 Query: 69 --APIIVAYHFNSDLARLQK------AFPQGRTLDKDPCTI-----QEWNEGKIPLLFAH 115 + I++ + F S + + K F R P + +E+N G +LF Sbjct: 1101 LRSKILIFFQFKSSIDFVIKDIMEKYKFKYSRLDGSVPSSTRAKIAEEFNTGTTQILFLT 1160 Query: 116 PASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNT 175 G GLNL ++++ W + Q M R + G KR V V+ LIA+NT Sbjct: 1161 TQVGGLGLNLTGADTVVMYEHDWNPFNDLQAM------DRAHRIGQKRTVNVFRLIAKNT 1214 Query: 176 IDELVL 181 ++E V+ Sbjct: 1215 LEEKVM 1220 >gi|167519292|ref|XP_001743986.1| hypothetical protein [Monosiga brevicollis MX1] gi|163777948|gb|EDQ91564.1| predicted protein [Monosiga brevicollis MX1] Length = 1542 Score = 46.2 bits (108), Expect = 0.002, Method: Composition-based stats. Identities = 36/115 (31%), Positives = 54/115 (46%), Gaps = 12/115 (10%) Query: 78 NSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFF 135 + D RL+ R KD C ++N+ P L + GLN+ YGGN ++ F Sbjct: 1063 DQDFFRLEGETSSARR--KDMC--DQFNQPDEPCRLFLVSIRAGATGLNM-YGGNRVILF 1117 Query: 136 SLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 + W+ Q I R + G ++ V+VY L+A TI+E +L R K TI Sbjct: 1118 DVSWNPATDNQAISRC-----HRYGQQKTVYVYRLVAAGTIEEHILSRQINKMTI 1167 >gi|254824296|ref|ZP_05229297.1| helicase [Listeria monocytogenes FSL J1-194] gi|255520940|ref|ZP_05388177.1| hypothetical protein LmonocFSL_06916 [Listeria monocytogenes FSL J1-175] gi|293593530|gb|EFG01291.1| helicase [Listeria monocytogenes FSL J1-194] Length = 1072 Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust. Identities = 26/95 (27%), Positives = 46/95 (48%), Gaps = 6/95 (6%) Query: 101 IQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 + +NEG+ + + G GLNL G + ++ + LWW+ +E R + G Sbjct: 956 VNAFNEGENDIFLISLKAGGTGLNL-VGADTVILYDLWWN-----PAVEEQATGRAHRIG 1009 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 KR V V+ +I + TI+E + + K + D L+ Sbjct: 1010 QKRVVQVFRMITKGTIEERIFDLQKKKQALVDELI 1044 >gi|217964204|ref|YP_002349882.1| DNA/RNA helicase protein [Listeria monocytogenes HCC23] gi|217333474|gb|ACK39268.1| DNA/RNA helicase protein [Listeria monocytogenes HCC23] gi|307571229|emb|CAR84408.1| helicase, Snf2 family [Listeria monocytogenes L99] Length = 1072 Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust. Identities = 26/95 (27%), Positives = 46/95 (48%), Gaps = 6/95 (6%) Query: 101 IQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 + +NEG+ + + G GLNL G + ++ + LWW+ +E R + G Sbjct: 956 VNAFNEGENDIFLISLKAGGTGLNL-VGADTVILYDLWWN-----PAVEEQATGRAHRIG 1009 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 KR V V+ +I + TI+E + + K + D L+ Sbjct: 1010 QKRVVQVFRMITKGTIEERIFDLQKKKQALVDELI 1044 >gi|328957397|ref|YP_004374783.1| putative ATP-binding SNF2 helicase or protein kinase [Carnobacterium sp. 17-4] gi|328673721|gb|AEB29767.1| putative ATP-binding SNF2 helicase or protein kinase [Carnobacterium sp. 17-4] Length = 1075 Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust. Identities = 40/154 (25%), Positives = 73/154 (47%), Gaps = 18/154 (11%) Query: 55 KIKALEVIIEKA--NAAPIIVAYHFNSDLARLQKAFPQ---------GRTLDKDPC-TIQ 102 K++ L+ I+ A N I++ F S LA ++K + G+T K+ + Sbjct: 903 KLEQLKETIQTARENGRRILIFSQFTSMLAIIEKELDEQEVETFYLSGQTKPKERIEMVN 962 Query: 103 EWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFK 162 ++N G+ + + G GLNL G ++++ + LWW+ +E R + G K Sbjct: 963 KFNAGEKDVFLISLKAGGTGLNLT-GADMVILYDLWWN-----PAVEEQAAGRAHRIGQK 1016 Query: 163 RAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + V V LIA+ TI+E + Q + K + D ++ Sbjct: 1017 KVVQVLRLIAEGTIEEKIDQLQQEKKALFDQIIT 1050 >gi|254852266|ref|ZP_05241614.1| helicase [Listeria monocytogenes FSL R2-503] gi|300766136|ref|ZP_07076102.1| Snf2 family helicase [Listeria monocytogenes FSL N1-017] gi|258605574|gb|EEW18182.1| helicase [Listeria monocytogenes FSL R2-503] gi|300513159|gb|EFK40240.1| Snf2 family helicase [Listeria monocytogenes FSL N1-017] Length = 1072 Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust. Identities = 26/95 (27%), Positives = 46/95 (48%), Gaps = 6/95 (6%) Query: 101 IQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 + +NEG+ + + G GLNL G + ++ + LWW+ +E R + G Sbjct: 956 VNAFNEGENDIFLISLKAGGTGLNL-VGADTVILYDLWWN-----PAVEEQATGRAHRIG 1009 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 KR V V+ +I + TI+E + + K + D L+ Sbjct: 1010 QKRVVQVFRMITKGTIEERIFDLQKKKQALVDELI 1044 >gi|158292419|ref|XP_313902.4| AGAP005035-PA [Anopheles gambiae str. PEST] gi|157016983|gb|EAA09385.4| AGAP005035-PA [Anopheles gambiae str. PEST] Length = 1608 Score = 46.2 bits (108), Expect = 0.003, Method: Composition-based stats. Identities = 31/95 (32%), Positives = 46/95 (48%), Gaps = 10/95 (10%) Query: 105 NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQM--IERIGVTRQRQAGFK 162 N I + + G G+NL ++ + S W + Q M R+G T+Q Sbjct: 1190 NRADIFVFLLSTRAGGLGINLTAADTVIFYDSDWNPTVDQQAMDRAHRLGQTKQ------ 1243 Query: 163 RAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 V VY LI + TI+E +LQR R KS IQ +++N Sbjct: 1244 --VTVYRLICKGTIEERILQRAREKSEIQRMVING 1276 >gi|187919690|ref|YP_001888721.1| Non-specific serine/threonine protein kinase [Burkholderia phytofirmans PsJN] gi|187718128|gb|ACD19351.1| Non-specific serine/threonine protein kinase [Burkholderia phytofirmans PsJN] Length = 1155 Score = 46.2 bits (108), Expect = 0.003, Method: Composition-based stats. Identities = 25/96 (26%), Positives = 49/96 (51%), Gaps = 6/96 (6%) Query: 101 IQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 ++ + +G++PL + G GLNL + ++ + WW+ Q +R + G Sbjct: 1038 VERFQKGEVPLFLISLKAGGVGLNLT-AADTVIHYDPWWNPAAENQATDR-----AHRLG 1091 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + VFVY LIA +I+E +++ K+ + D +L+ Sbjct: 1092 QDKPVFVYKLIAAGSIEEKIVELQEQKAGLADSILS 1127 >gi|254497098|ref|ZP_05109919.1| DNA helicase [Legionella drancourtii LLAP12] gi|254353678|gb|EET12392.1| DNA helicase [Legionella drancourtii LLAP12] Length = 1091 Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust. Identities = 27/99 (27%), Positives = 46/99 (46%), Gaps = 6/99 (6%) Query: 99 CTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQ 158 ++++ EGK P+ + G GLNL + + + WW+ +E R + Sbjct: 978 AMVEKFQEGKTPVFLISLKAGGTGLNLTRADTV-IHYDPWWN-----PAVEDQATDRTHR 1031 Query: 159 AGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 G + VFVY LI T++E +L K + D +L+A Sbjct: 1032 IGQENPVFVYKLITAGTVEEAILGMQERKRQLVDGILSA 1070 >gi|168042770|ref|XP_001773860.1| SNF2 family DNA-dependent ATPase [Physcomitrella patens subsp. patens] gi|162674847|gb|EDQ61350.1| SNF2 family DNA-dependent ATPase [Physcomitrella patens subsp. patens] Length = 1566 Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust. Identities = 29/89 (32%), Positives = 48/89 (53%), Gaps = 8/89 (8%) Query: 101 IQEWNE--GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQ 158 I+ +N+ GKI +L A +CG G+ L G + +VF + W+ + R + R + Sbjct: 1366 IERFNDRKGKIRVLLASTKACGEGITLT-GASRVVFMDVLWN-----PAVIRQAIHRAFR 1419 Query: 159 AGFKRAVFVYYLIAQNTIDELVLQRLRTK 187 G + AV VY L+A T++E QR+ +K Sbjct: 1420 IGQRNAVHVYRLVASGTMEESKYQRMVSK 1448 >gi|240170156|ref|ZP_04748815.1| SNF2-related protein [Mycobacterium kansasii ATCC 12478] Length = 1077 Score = 46.2 bits (108), Expect = 0.003, Method: Composition-based stats. Identities = 29/91 (31%), Positives = 45/91 (49%), Gaps = 7/91 (7%) Query: 91 GRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 GRT ++ P IQ++ EG P+ + G GLNL + WW+ Q ++R Sbjct: 960 GRTRNR-PKVIQQFKEGTAPVFLISLKAGGFGLNLTEA-DYCFLLDPWWNPATETQAVDR 1017 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVL 181 + G +R V VY LIA++TI+ V+ Sbjct: 1018 -----THRIGQQRNVMVYRLIARDTIEAKVM 1043 >gi|152986052|ref|YP_001350061.1| helicase [Pseudomonas aeruginosa PA7] gi|150961210|gb|ABR83235.1| probable helicase [Pseudomonas aeruginosa PA7] Length = 773 Score = 46.2 bits (108), Expect = 0.003, Method: Composition-based stats. Identities = 35/140 (25%), Positives = 63/140 (45%), Gaps = 16/140 (11%) Query: 66 ANAAPIIVAYHFNSDLARLQKAFPQ---------GRTLDKDPCTIQEWNEGKIPLLFAHP 116 A +++ F S LA ++ A Q G T D+ +Q + G++P+ Sbjct: 616 AEGRRVLLFSQFTSMLALVEDALRQRGVDYVLLTGETRDRR-APVQRFQGGQVPVFLISL 674 Query: 117 ASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTI 176 + G GLNL + ++ + WW+ +E R + G + VFVY LIA+ T+ Sbjct: 675 KAGGVGLNLT-AADTVIHYDPWWN-----PAVENQASDRAYRIGQDKPVFVYRLIARGTV 728 Query: 177 DELVLQRLRTKSTIQDLLLN 196 +E + + K+ + D L + Sbjct: 729 EEKIQHLQQEKAALADGLFS 748 >gi|323487763|ref|ZP_08093021.1| non-specific serine/threonine protein kinase [Planococcus donghaensis MPA1U2] gi|323398497|gb|EGA91285.1| non-specific serine/threonine protein kinase [Planococcus donghaensis MPA1U2] Length = 1047 Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust. Identities = 30/97 (30%), Positives = 52/97 (53%), Gaps = 7/97 (7%) Query: 102 QEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGF 161 + +NEG+ L + G GLNL G + +V + LWW+ QQ R + G Sbjct: 939 RRFNEGQGELFLISLKAGGTGLNLT-GADTVVLYDLWWNPAVEQQ-----AADRAHRMGQ 992 Query: 162 KRAVFVYYLIAQNTIDELVLQ-RLRTKSTIQDLLLNA 197 ++ V V LIA+ TI+E + + +++ K+ I D++L+ Sbjct: 993 EKEVQVVRLIAKGTIEEKINELQMKKKNLIDDVILSG 1029 >gi|321460021|gb|EFX71068.1| hypothetical protein DAPPUDRAFT_309233 [Daphnia pulex] Length = 1322 Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust. Identities = 26/78 (33%), Positives = 43/78 (55%), Gaps = 1/78 (1%) Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 G G+NL + ++F+ W+ QQ ++R Q + + V VY LI + TI+E Sbjct: 1205 GLGINLT-AADTVIFYDSDWNPTVDQQAMDRAHRLGQTKQAREHIVTVYRLICKGTIEER 1263 Query: 180 VLQRLRTKSTIQDLLLNA 197 +LQR R KS IQ ++++ Sbjct: 1264 ILQRAREKSKIQKIVISG 1281 >gi|116623003|ref|YP_825159.1| SNF2-like protein [Candidatus Solibacter usitatus Ellin6076] gi|116226165|gb|ABJ84874.1| SNF2-related protein [Candidatus Solibacter usitatus Ellin6076] Length = 1073 Score = 46.2 bits (108), Expect = 0.003, Method: Composition-based stats. Identities = 33/116 (28%), Positives = 52/116 (44%), Gaps = 6/116 (5%) Query: 80 DLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWW 139 D A ++ + G T D+ N+ + L + G GLNL + WW Sbjct: 944 DAAGVRYEYLDGSTRDRQARVDTFQNDPQCTLFLISLKAGGLGLNLT-AAEYVFLLDPWW 1002 Query: 140 DLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 + +E V R + G R VF Y LIA++T++E VL+ +TK + D +L Sbjct: 1003 N-----PAVEAQAVDRAHRIGQTRPVFAYRLIARDTVEEKVLELQKTKRELADAIL 1053 >gi|328881666|emb|CCA54905.1| Helicase, SNF2 or RAD54 family [Streptomyces venezuelae ATCC 10712] Length = 948 Score = 46.2 bits (108), Expect = 0.003, Method: Composition-based stats. Identities = 24/97 (24%), Positives = 48/97 (49%), Gaps = 6/97 (6%) Query: 101 IQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 + + G++P+ + G GLNL G++ V + WW+ +E R + G Sbjct: 835 VDRFQAGEVPVFLLSLKAAGTGLNLTRAGHV-VHYDRWWN-----PAVEEQATDRAYRIG 888 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + V V+ L+A+ T+++ + + LR K + D +L + Sbjct: 889 QTQPVQVHRLVAEGTVEDRIAEMLRAKRALADAVLGS 925 >gi|313618637|gb|EFR90589.1| SNF2 family helicase [Listeria innocua FSL S4-378] Length = 208 Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust. Identities = 35/141 (24%), Positives = 63/141 (44%), Gaps = 16/141 (11%) Query: 65 KANAAPIIVAYHFNSDLARLQKAFPQ-GRTL----DKDPC-----TIQEWNEGKIPLLFA 114 + N I++ F LA +++ + G+ L K P + +NEG+ + Sbjct: 46 RENGKRILIFSQFTGMLAIIRRKLEEDGQPLFYMDGKTPAKTRLDMVNAFNEGENDIFLI 105 Query: 115 HPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQN 174 + G GLNL G + ++ + LWW+ +E R + G KR V V+ +I + Sbjct: 106 SLKAGGTGLNL-VGADTVILYDLWWN-----PAVEEQATGRAHRIGQKRVVQVFRMITKG 159 Query: 175 TIDELVLQRLRTKSTIQDLLL 195 TI+E + + K + D L+ Sbjct: 160 TIEERIFDLQKKKQALVDELI 180 >gi|326329299|ref|ZP_08195624.1| SNF2/helicase domain protein [Nocardioidaceae bacterium Broad-1] gi|325952874|gb|EGD44889.1| SNF2/helicase domain protein [Nocardioidaceae bacterium Broad-1] Length = 907 Score = 45.8 bits (107), Expect = 0.003, Method: Composition-based stats. Identities = 27/97 (27%), Positives = 47/97 (48%), Gaps = 6/97 (6%) Query: 101 IQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 ++ + EG++P+ + G GLNL ++ + WW+ +E R + G Sbjct: 785 VERFQEGEVPVFLLSLKAGGVGLNLTRADHV-IHVDRWWN-----PAVEDQATDRAHRIG 838 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 R V V+ LI Q T++E V + L+ K + D +L A Sbjct: 839 QTRTVQVHRLITQGTVEERVAELLQRKRVLADAVLGA 875 >gi|313608461|gb|EFR84385.1| SNF2 family helicase [Listeria monocytogenes FSL F2-208] Length = 966 Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust. Identities = 26/95 (27%), Positives = 46/95 (48%), Gaps = 6/95 (6%) Query: 101 IQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 + +NEG+ + + G GLNL G + ++ + LWW+ +E R + G Sbjct: 850 VNAFNEGENDIFLISLKAGGTGLNL-VGADTVILYDLWWN-----PAVEEQATGRAHRIG 903 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 KR V V+ +I + TI+E + + K + D L+ Sbjct: 904 QKRVVQVFRMITKGTIEERIFDLQKKKQALVDELI 938 >gi|253745191|gb|EET01274.1| Transcriptional activator, putative [Giardia intestinalis ATCC 50581] Length = 1837 Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust. Identities = 22/80 (27%), Positives = 47/80 (58%), Gaps = 6/80 (7%) Query: 122 GLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVL 181 GLNL + +F+ W+ + Q ++R+ + G K++V +Y L+ + +IDE +L Sbjct: 1725 GLNLTRASTV-IFYENDWNPTQDAQAMDRV-----HRLGQKKSVVIYRLVTEGSIDEKIL 1778 Query: 182 QRLRTKSTIQDLLLNALKKE 201 ++ R+K +Q+L+L +++ Sbjct: 1779 EKARSKEIVQELVLRGQRRD 1798 >gi|195451229|ref|XP_002072824.1| GK13479 [Drosophila willistoni] gi|194168909|gb|EDW83810.1| GK13479 [Drosophila willistoni] Length = 1892 Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust. Identities = 28/80 (35%), Positives = 42/80 (52%), Gaps = 10/80 (12%) Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQM--IERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 G G+NL ++ + S W + Q M R+G T+Q V VY LI + TI+ Sbjct: 1240 GLGINLTAADTVIFYDSDWNPTVDQQAMDRAHRLGQTKQ--------VTVYRLICKGTIE 1291 Query: 178 ELVLQRLRTKSTIQDLLLNA 197 E +LQR R KS IQ ++++ Sbjct: 1292 ERILQRAREKSEIQRMVISG 1311 >gi|47459148|ref|YP_016010.1| SWF/SNF family helicase [Mycoplasma mobile 163K] gi|47458477|gb|AAT27799.1| swf/snf family helicase-like protein [Mycoplasma mobile 163K] Length = 958 Score = 45.8 bits (107), Expect = 0.003, Method: Composition-based stats. Identities = 43/160 (26%), Positives = 79/160 (49%), Gaps = 23/160 (14%) Query: 56 IKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQ---------GRTLDKDPCTIQEW-N 105 IK+++++ +K +++ F ++ +K F + G+T K+ I E+ N Sbjct: 800 IKSIKLLKQK-----VLIFTQFTKNIPFFEKNFIKSNIKYDIISGKTNKKERFKITEYFN 854 Query: 106 EGK-IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA 164 E I +L + GLNL N+ + + +WW+ Q I+R+ + G KR Sbjct: 855 ESSDIDVLIISLRAGSLGLNLTSANNV-ILYDIWWNQSVESQAIDRV-----HRIGQKRG 908 Query: 165 VFVYYLIAQNTIDELVLQRLRTKSTIQDLLL-NALKKETI 203 V V+ LI ++TI+E V + K I D++L N+L+ + I Sbjct: 909 VNVFKLIMKDTIEEKVFELQSQKQKIIDIVLENSLETKNI 948 >gi|159111807|ref|XP_001706134.1| Transcriptional activator, putative [Giardia lamblia ATCC 50803] gi|157434227|gb|EDO78460.1| Transcriptional activator, putative [Giardia lamblia ATCC 50803] Length = 1859 Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust. Identities = 22/80 (27%), Positives = 47/80 (58%), Gaps = 6/80 (7%) Query: 122 GLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVL 181 GLNL + +F+ W+ + Q ++R+ + G K++V +Y L+ + +IDE +L Sbjct: 1747 GLNLTRASTV-IFYENDWNPTQDAQAMDRV-----HRLGQKKSVVIYRLVTEGSIDEKIL 1800 Query: 182 QRLRTKSTIQDLLLNALKKE 201 ++ R+K +Q+L+L +++ Sbjct: 1801 EKARSKEIVQELVLRGQRRD 1820 >gi|319949229|ref|ZP_08023314.1| SNF2-related protein [Dietzia cinnamea P4] gi|319437114|gb|EFV92149.1| SNF2-related protein [Dietzia cinnamea P4] Length = 818 Score = 45.8 bits (107), Expect = 0.004, Method: Composition-based stats. Identities = 37/145 (25%), Positives = 69/145 (47%), Gaps = 14/145 (9%) Query: 53 DEKIKALEVIIEKANAAPIIVAY--HFNSDLARLQK-----AFPQGRTLDKDPCTIQEWN 105 DE I AL ++ + + A + + + ++ +ARL+ A G T D+ + E+ Sbjct: 656 DELIAALREVVAEGHRALVFSQFTTYLDTVVARLRDEGITVAHLDGSTTDR-AGAVGEFT 714 Query: 106 EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 EG + + G GLNL G + + WW+ Q ++R + G R V Sbjct: 715 EGGAQVFCLSLKAGGVGLNL-VGADYVFLLDPWWNPATEAQAVDR-----AHRIGQTRPV 768 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTI 190 VY ++A++TI+E V++ + K+ + Sbjct: 769 LVYRMVARDTIEERVVELQQRKAEL 793 >gi|157132188|ref|XP_001662505.1| helicase [Aedes aegypti] gi|108871256|gb|EAT35481.1| helicase [Aedes aegypti] Length = 1372 Score = 45.8 bits (107), Expect = 0.004, Method: Compositional matrix adjust. Identities = 30/95 (31%), Positives = 46/95 (48%), Gaps = 10/95 (10%) Query: 105 NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQM--IERIGVTRQRQAGFK 162 N I + + G G+NL ++ + S W + Q M R+G T+Q Sbjct: 1187 NRADIFVFLLSTRAGGLGINLTAADTVIFYDSDWNPTVDQQAMDRAHRLGQTKQ------ 1240 Query: 163 RAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 V VY LI + TI+E +LQR R KS IQ ++++ Sbjct: 1241 --VTVYRLICKGTIEERILQRAREKSEIQRMVISG 1273 >gi|66801511|ref|XP_629681.1| SNF2-related domain-containing protein [Dictyostelium discoideum AX4] gi|60463108|gb|EAL61303.1| SNF2-related domain-containing protein [Dictyostelium discoideum AX4] Length = 2129 Score = 45.8 bits (107), Expect = 0.004, Method: Composition-based stats. Identities = 33/98 (33%), Positives = 49/98 (50%), Gaps = 13/98 (13%) Query: 110 PLLFAHPAS---CGHGLNLQYGGNILVFFSLWWDL--EEHQQMIERIGVTRQRQAGFKRA 164 P +FA S CG G+NL ++ + S W E+ Q R+G TR Sbjct: 1833 PSIFAFLLSTRACGIGINLTSADTVIFYDSDWNPTVDEQAQDRAHRLGQTR--------P 1884 Query: 165 VFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKET 202 V VY LI +NTI+E +L+R + K IQ +++ K E+ Sbjct: 1885 VTVYRLITKNTIEEKILKRAKQKHQIQSIVIAGGKFES 1922 >gi|198455503|ref|XP_001360023.2| GA16098 [Drosophila pseudoobscura pseudoobscura] gi|198133273|gb|EAL29175.2| GA16098 [Drosophila pseudoobscura pseudoobscura] Length = 1662 Score = 45.8 bits (107), Expect = 0.004, Method: Compositional matrix adjust. Identities = 28/80 (35%), Positives = 42/80 (52%), Gaps = 10/80 (12%) Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQM--IERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 G G+NL ++ + S W + Q M R+G T+Q V VY LI + TI+ Sbjct: 1244 GLGINLTAADTVIFYDSDWNPTVDQQAMDRAHRLGQTKQ--------VTVYRLICKGTIE 1295 Query: 178 ELVLQRLRTKSTIQDLLLNA 197 E +LQR R KS IQ ++++ Sbjct: 1296 ERILQRAREKSEIQRMVISG 1315 >gi|302607772|emb|CBW45684.1| putative helicase [Streptomyces pristinaespiralis] Length = 936 Score = 45.8 bits (107), Expect = 0.004, Method: Composition-based stats. Identities = 25/97 (25%), Positives = 49/97 (50%), Gaps = 6/97 (6%) Query: 101 IQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 +Q + +G++P+ + G GLNL ++ V + WW+ +E R + G Sbjct: 823 VQRFQDGEVPVFLLSLKAAGTGLNLTRADHV-VHYDRWWN-----PAVEAQATDRAYRIG 876 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 R+V V+ +IA+ TI++ + L +K + D +L + Sbjct: 877 QTRSVQVHKMIAEGTIEDRIAALLESKKDLADAVLGS 913 >gi|297196538|ref|ZP_06913936.1| SNF2/RAD54 family helicase [Streptomyces pristinaespiralis ATCC 25486] gi|297153265|gb|EFH32249.1| SNF2/RAD54 family helicase [Streptomyces pristinaespiralis ATCC 25486] Length = 923 Score = 45.8 bits (107), Expect = 0.004, Method: Composition-based stats. Identities = 25/97 (25%), Positives = 49/97 (50%), Gaps = 6/97 (6%) Query: 101 IQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 +Q + +G++P+ + G GLNL ++ V + WW+ +E R + G Sbjct: 810 VQRFQDGEVPVFLLSLKAAGTGLNLTRADHV-VHYDRWWN-----PAVEAQATDRAYRIG 863 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 R+V V+ +IA+ TI++ + L +K + D +L + Sbjct: 864 QTRSVQVHKMIAEGTIEDRIAALLESKKDLADAVLGS 900 >gi|260790077|ref|XP_002590070.1| hypothetical protein BRAFLDRAFT_123437 [Branchiostoma floridae] gi|229275258|gb|EEN46081.1| hypothetical protein BRAFLDRAFT_123437 [Branchiostoma floridae] Length = 1878 Score = 45.8 bits (107), Expect = 0.004, Method: Compositional matrix adjust. Identities = 29/82 (35%), Positives = 43/82 (52%), Gaps = 10/82 (12%) Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQM--IERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 G G+NL ++ + S W + Q M R+G T+Q V VY LI + TI+ Sbjct: 1498 GLGINLTAADTVIFYDSDWNPTVDQQAMDRAHRLGQTKQ--------VTVYRLICKGTIE 1549 Query: 178 ELVLQRLRTKSTIQDLLLNALK 199 E +LQR R KS IQ ++++ K Sbjct: 1550 ERILQRAREKSEIQRMVISGGK 1571 >gi|17862908|gb|AAL39931.1| SD02886p [Drosophila melanogaster] Length = 1638 Score = 45.8 bits (107), Expect = 0.004, Method: Compositional matrix adjust. Identities = 28/80 (35%), Positives = 42/80 (52%), Gaps = 10/80 (12%) Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQM--IERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 G G+NL ++ + S W + Q M R+G T+Q V VY LI + TI+ Sbjct: 1235 GLGINLTAADTVIFYDSDWNPTVDQQAMDRAHRLGQTKQ--------VTVYRLICKGTIE 1286 Query: 178 ELVLQRLRTKSTIQDLLLNA 197 E +LQR R KS IQ ++++ Sbjct: 1287 ERILQRAREKSEIQRMVISG 1306 >gi|24648168|ref|NP_732413.1| Ino80 [Drosophila melanogaster] gi|75026769|sp|Q9VDY1|INO80_DROME RecName: Full=Putative DNA helicase Ino80; Short=dINO80 gi|23171713|gb|AAF55658.2| Ino80 [Drosophila melanogaster] Length = 1638 Score = 45.8 bits (107), Expect = 0.004, Method: Compositional matrix adjust. Identities = 28/80 (35%), Positives = 42/80 (52%), Gaps = 10/80 (12%) Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQM--IERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 G G+NL ++ + S W + Q M R+G T+Q V VY LI + TI+ Sbjct: 1235 GLGINLTAADTVIFYDSDWNPTVDQQAMDRAHRLGQTKQ--------VTVYRLICKGTIE 1286 Query: 178 ELVLQRLRTKSTIQDLLLNA 197 E +LQR R KS IQ ++++ Sbjct: 1287 ERILQRAREKSEIQRMVISG 1306 >gi|308160724|gb|EFO63198.1| Transcriptional activator, putative [Giardia lamblia P15] Length = 1860 Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust. Identities = 22/80 (27%), Positives = 47/80 (58%), Gaps = 6/80 (7%) Query: 122 GLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVL 181 GLNL + +F+ W+ + Q ++R+ + G K++V +Y L+ + +IDE +L Sbjct: 1748 GLNLTRASTV-IFYENDWNPTQDAQAMDRV-----HRLGQKKSVVIYRLVTEGSIDEKIL 1801 Query: 182 QRLRTKSTIQDLLLNALKKE 201 ++ R+K +Q+L+L +++ Sbjct: 1802 EKARSKEIVQELVLRGQRRD 1821 >gi|224371758|ref|YP_002605922.1| putative helicase [Desulfobacterium autotrophicum HRM2] gi|223694475|gb|ACN17758.1| putative helicase [Desulfobacterium autotrophicum HRM2] Length = 942 Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust. Identities = 32/107 (29%), Positives = 48/107 (44%), Gaps = 6/107 (5%) Query: 91 GRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 G T D+ + + L + G GLNL + + F WW++ Q I+R Sbjct: 823 GATRDRSAIVERFQTDNSCAALMMTLKTGGLGLNLT-AADYVFLFDPWWNVAAENQAIDR 881 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + G K VF Y LIA+NTI+E +L+ K + D L+ A Sbjct: 882 -----AHRMGQKNTVFSYRLIARNTIEEKILKLQAKKKALFDSLIAA 923 >gi|195109608|ref|XP_001999375.1| GI24474 [Drosophila mojavensis] gi|193915969|gb|EDW14836.1| GI24474 [Drosophila mojavensis] Length = 1663 Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust. Identities = 28/80 (35%), Positives = 42/80 (52%), Gaps = 10/80 (12%) Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQM--IERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 G G+NL ++ + S W + Q M R+G T+Q V VY LI + TI+ Sbjct: 1249 GLGINLTAADTVIFYDSDWNPTVDQQAMDRAHRLGQTKQ--------VTVYRLICKGTIE 1300 Query: 178 ELVLQRLRTKSTIQDLLLNA 197 E +LQR R KS IQ ++++ Sbjct: 1301 ERILQRAREKSEIQRMVISG 1320 >gi|195062800|ref|XP_001996256.1| GH22391 [Drosophila grimshawi] gi|193899751|gb|EDV98617.1| GH22391 [Drosophila grimshawi] Length = 1659 Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust. Identities = 28/80 (35%), Positives = 42/80 (52%), Gaps = 10/80 (12%) Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQM--IERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 G G+NL ++ + S W + Q M R+G T+Q V VY LI + TI+ Sbjct: 1255 GLGINLTAADTVIFYDSDWNPTVDQQAMDRAHRLGQTKQ--------VTVYRLICKGTIE 1306 Query: 178 ELVLQRLRTKSTIQDLLLNA 197 E +LQR R KS IQ ++++ Sbjct: 1307 ERILQRAREKSEIQRMVISG 1326 >gi|307192391|gb|EFN75626.1| Putative DNA helicase Ino80 [Harpegnathos saltator] Length = 1449 Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust. Identities = 28/80 (35%), Positives = 42/80 (52%), Gaps = 10/80 (12%) Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQM--IERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 G G+NL ++ + S W + Q M R+G T+Q V VY LI + TI+ Sbjct: 1033 GLGINLTAADTVIFYDSDWNPTVDQQAMDRAHRLGQTKQ--------VTVYRLICKGTIE 1084 Query: 178 ELVLQRLRTKSTIQDLLLNA 197 E +LQR R KS IQ ++++ Sbjct: 1085 ERILQRAREKSEIQRMVISG 1104 >gi|242012609|ref|XP_002427022.1| predicted protein [Pediculus humanus corporis] gi|212511267|gb|EEB14284.1| predicted protein [Pediculus humanus corporis] Length = 1570 Score = 45.4 bits (106), Expect = 0.005, Method: Compositional matrix adjust. Identities = 28/80 (35%), Positives = 42/80 (52%), Gaps = 10/80 (12%) Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQM--IERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 G G+NL ++ + S W + Q M R+G T+Q V VY LI + TI+ Sbjct: 1216 GLGINLTAADTVIFYDSDWNPTVDQQAMDRAHRLGQTKQ--------VTVYRLICKGTIE 1267 Query: 178 ELVLQRLRTKSTIQDLLLNA 197 E +LQR R KS IQ ++++ Sbjct: 1268 ERILQRAREKSEIQRMVISG 1287 >gi|326789214|ref|YP_004307035.1| SNF2-related protein [Clostridium lentocellum DSM 5427] gi|326539978|gb|ADZ81837.1| SNF2-related protein [Clostridium lentocellum DSM 5427] Length = 1119 Score = 45.4 bits (106), Expect = 0.005, Method: Compositional matrix adjust. Identities = 23/80 (28%), Positives = 40/80 (50%), Gaps = 6/80 (7%) Query: 101 IQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 + E+N IP+ + G GLNL G ++++ + WW+L Q R + G Sbjct: 1009 VNEFNTSDIPVFLISLKAGGTGLNLT-GADVVIHYDPWWNLSSQNQ-----ATDRAYRIG 1062 Query: 161 FKRAVFVYYLIAQNTIDELV 180 K V V+ +I +N+I+E + Sbjct: 1063 QKNKVQVFQMITKNSIEEKI 1082 >gi|221057618|ref|XP_002261317.1| DNA helicase [Plasmodium knowlesi strain H] gi|194247322|emb|CAQ40722.1| DNA helicase, putative [Plasmodium knowlesi strain H] Length = 875 Score = 45.4 bits (106), Expect = 0.005, Method: Compositional matrix adjust. Identities = 34/110 (30%), Positives = 53/110 (48%), Gaps = 12/110 (10%) Query: 94 LDKDPCTIQEW-NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWW---DLEEHQQMIE 149 +DK I+ + N+ KI + +CG GLNL N +VF L+W + + + Sbjct: 666 IDKRELYIKSFQNDDKIKIALLSLTACGLGLNLT-AANTVVFGELYWVPGQIIQAEDRAH 724 Query: 150 RIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 RIG T + + ++YLIAQ TIDE V + + K LN ++ Sbjct: 725 RIGTTHE-------VINIHYLIAQKTIDETVWRIINRKWNTLTTALNGME 767 >gi|195391896|ref|XP_002054595.1| GJ24541 [Drosophila virilis] gi|194152681|gb|EDW68115.1| GJ24541 [Drosophila virilis] Length = 1632 Score = 45.4 bits (106), Expect = 0.005, Method: Compositional matrix adjust. Identities = 28/80 (35%), Positives = 42/80 (52%), Gaps = 10/80 (12%) Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQM--IERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 G G+NL ++ + S W + Q M R+G T+Q V VY LI + TI+ Sbjct: 1249 GLGINLTAADTVIFYDSDWNPTVDQQAMDRAHRLGQTKQ--------VTVYRLICKGTIE 1300 Query: 178 ELVLQRLRTKSTIQDLLLNA 197 E +LQR R KS IQ ++++ Sbjct: 1301 ERILQRAREKSEIQRMVISG 1320 >gi|194364294|ref|YP_002026904.1| Non-specific serine/threonine protein kinase [Stenotrophomonas maltophilia R551-3] gi|194347098|gb|ACF50221.1| Non-specific serine/threonine protein kinase [Stenotrophomonas maltophilia R551-3] Length = 1104 Score = 45.4 bits (106), Expect = 0.005, Method: Composition-based stats. Identities = 26/95 (27%), Positives = 48/95 (50%), Gaps = 6/95 (6%) Query: 101 IQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 +Q + +G++PL + G GLNL + ++ F WW+ Q +R + G Sbjct: 977 VQRFMQGEVPLFLISLKAGGVGLNLT-AADTVIHFDPWWNPAAENQASDR-----AHRIG 1030 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 ++ VFVY LIA +I+E + + K+ + + +L Sbjct: 1031 QQQPVFVYRLIAAGSIEERIAELQERKAMLAESIL 1065 >gi|330443940|ref|YP_004376926.1| helicase, Snf2/Rad54 family [Chlamydophila pecorum E58] gi|328807050|gb|AEB41223.1| helicase, Snf2/Rad54 family [Chlamydophila pecorum E58] Length = 1117 Score = 45.4 bits (106), Expect = 0.005, Method: Compositional matrix adjust. Identities = 21/63 (33%), Positives = 37/63 (58%), Gaps = 6/63 (9%) Query: 118 SCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 + G G+NL GNI++ + WW+ + Q ++R+ + G K VF+Y LI +NT++ Sbjct: 1012 AAGTGINLT-AGNIVIMYDRWWNPAKENQALDRV-----HRFGQKNTVFIYKLITENTLE 1065 Query: 178 ELV 180 E + Sbjct: 1066 ERI 1068 >gi|70944659|ref|XP_742238.1| DNA helicase [Plasmodium chabaudi chabaudi] gi|56521100|emb|CAH78659.1| DNA helicase, putative [Plasmodium chabaudi chabaudi] Length = 437 Score = 45.4 bits (106), Expect = 0.005, Method: Compositional matrix adjust. Identities = 30/91 (32%), Positives = 47/91 (51%), Gaps = 12/91 (13%) Query: 94 LDKDPCTIQEW-NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWW---DLEEHQQMIE 149 +DK I+ + ++ KI + +CG GLNL N +VF L+W + + + Sbjct: 223 IDKREVYIKNFQSDEKIRIAILSITACGVGLNLT-AANTVVFGELYWVPGQMIQAEDRAH 281 Query: 150 RIGVTRQRQAGFKRAVFVYYLIAQNTIDELV 180 RIG T + ++YL+AQNTIDE+V Sbjct: 282 RIGTTHD-------TINIHYLVAQNTIDEVV 305 >gi|170070470|ref|XP_001869591.1| helicase [Culex quinquefasciatus] gi|167866368|gb|EDS29751.1| helicase [Culex quinquefasciatus] Length = 1569 Score = 45.4 bits (106), Expect = 0.005, Method: Compositional matrix adjust. Identities = 28/80 (35%), Positives = 42/80 (52%), Gaps = 10/80 (12%) Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQM--IERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 G G+NL ++ + S W + Q M R+G T+Q V VY LI + TI+ Sbjct: 1255 GLGINLTAADTVIFYDSDWNPTVDQQAMDRAHRLGQTKQ--------VTVYRLICKGTIE 1306 Query: 178 ELVLQRLRTKSTIQDLLLNA 197 E +LQR R KS IQ ++++ Sbjct: 1307 ERILQRAREKSEIQRMVISG 1326 >gi|328543336|ref|YP_004303445.1| Helicase domain protein [Polymorphum gilvum SL003B-26A1] gi|326413081|gb|ADZ70144.1| Helicase domain protein [Polymorphum gilvum SL003B-26A1] Length = 481 Score = 45.4 bits (106), Expect = 0.005, Method: Compositional matrix adjust. Identities = 52/209 (24%), Positives = 94/209 (44%), Gaps = 26/209 (12%) Query: 4 YHKFQRELYCDLQ---GENIEAFNSAS--KTVKCLQLA-NGAVYYDEEKHWKEVHDEKIK 57 Y K + E+ C+++ GE A+ S + K + +QLA N ++ + E E K + Sbjct: 255 YDKMRDEMVCEIEAMSGEQYRAYASTALAKLTRLVQLACNPSLIFPE----AEGTPAKFE 310 Query: 58 ALEVIIEKANAAP---IIVAYHF----NSDLARLQKA---FPQGRTLDKDPCTIQEWNEG 107 AL+ +IE + P +I+ ++ + LAR+ A + T ++ + Sbjct: 311 ALDGVIEDILSVPGRKVILWSNYIRTIETLLARIPGAVAIYGGTPTSERQEIAASFQQDP 370 Query: 108 KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFV 167 + +L A+PA+ G G L + ++ SL W + + Q +R + G V Sbjct: 371 DVRVLIANPAAAGTGFTLT-AASFTIYESLSWRYDHYAQSQDR-----NHRIGQTEPVTY 424 Query: 168 YYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 LIA +TI+E ++ L KS + LL Sbjct: 425 LRLIAADTIEEAIVVALERKSALARTLLG 453 >gi|282891309|ref|ZP_06299811.1| hypothetical protein pah_c050o088 [Parachlamydia acanthamoebae str. Hall's coccus] gi|281498806|gb|EFB41123.1| hypothetical protein pah_c050o088 [Parachlamydia acanthamoebae str. Hall's coccus] Length = 1166 Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust. Identities = 25/83 (30%), Positives = 45/83 (54%), Gaps = 7/83 (8%) Query: 101 IQEWNEGK-IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQA 159 ++++NE + IP+ + G GLNL G + ++ + +WW+ Q +R+ + Sbjct: 1056 VKKFNEDENIPIFLVSLKAGGTGLNL-IGADTVIHYDMWWNPAVENQATDRV-----HRL 1109 Query: 160 GFKRAVFVYYLIAQNTIDELVLQ 182 G K++V Y LI TI+E +LQ Sbjct: 1110 GQKKSVLSYKLITLGTIEEKILQ 1132 >gi|317491226|ref|ZP_07949662.1| SNF2 family domain-containing protein [Enterobacteriaceae bacterium 9_2_54FAA] gi|316920773|gb|EFV42096.1| SNF2 family domain-containing protein [Enterobacteriaceae bacterium 9_2_54FAA] Length = 1085 Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust. Identities = 28/106 (26%), Positives = 51/106 (48%), Gaps = 7/106 (6%) Query: 91 GRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 G T D+ +Q + G++PL + G GLNL + ++ + WW+ Q +R Sbjct: 965 GSTADRH-APVQRFQRGEVPLFLISLKAGGVGLNLT-AADTVIHYDPWWNPAAENQATDR 1022 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + G + VFVY LIA +I+E ++ K+ + + +L+ Sbjct: 1023 -----AHRMGQDKPVFVYKLIAAGSIEEKIVALQDKKAALANSILS 1063 >gi|302916069|ref|XP_003051845.1| hypothetical protein NECHADRAFT_106058 [Nectria haematococca mpVI 77-13-4] gi|256732784|gb|EEU46132.1| hypothetical protein NECHADRAFT_106058 [Nectria haematococca mpVI 77-13-4] Length = 1919 Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust. Identities = 24/80 (30%), Positives = 43/80 (53%), Gaps = 6/80 (7%) Query: 101 IQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 I+ +NEG + + G GLN+ +G N +V F + W+ +E+ G+ R + G Sbjct: 1340 IKRFNEGSKEVYLISTTAGGVGLNI-HGANRVVIFDIKWN-----PTVEQQGIGRAYRLG 1393 Query: 161 FKRAVFVYYLIAQNTIDELV 180 K+ VFVY+L T ++++ Sbjct: 1394 QKKPVFVYWLTTAGTFEQII 1413 >gi|94985591|ref|YP_604955.1| SNF2-related [Deinococcus geothermalis DSM 11300] gi|94555872|gb|ABF45786.1| Superfamily II DNA/RNA helicase, SNF2 family [Deinococcus geothermalis DSM 11300] Length = 1126 Score = 45.1 bits (105), Expect = 0.006, Method: Composition-based stats. Identities = 28/107 (26%), Positives = 52/107 (48%), Gaps = 7/107 (6%) Query: 91 GRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 G+T D+ +Q + +G++P+ + G GLNL + ++ WW+ Q +R Sbjct: 997 GQTKDR-ATPVQRFQQGEVPVFLISLKAGGVGLNLT-AADTVIHLDPWWNPAAENQATDR 1054 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + G + VFVY LIA +++E +L + KS + +L+ Sbjct: 1055 -----AYRIGQDKPVFVYKLIAAGSVEERILDLQQRKSALAQGVLDG 1096 >gi|260584382|ref|ZP_05852129.1| SNF2 family DNA/RNA helicase [Granulicatella elegans ATCC 700633] gi|260157900|gb|EEW92969.1| SNF2 family DNA/RNA helicase [Granulicatella elegans ATCC 700633] Length = 790 Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust. Identities = 48/189 (25%), Positives = 83/189 (43%), Gaps = 24/189 (12%) Query: 11 LYCDLQGENIEAFNSASKTVKC--LQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANA 68 L+ + + IE + S + + KC ++L A ++ + K++ D +A E N Sbjct: 565 LWSEFSDKQIELYESEAFSEKCSVMKLRRMAFLGEDSEKIKQIIDICKEARE------NG 618 Query: 69 APIIVAYHFNSD-LARLQKAFPQGRTL----DKDPCTIQE-----WNEGKIPLLFAHPAS 118 ++V F +D L RL++ P + D P QE + +L A + Sbjct: 619 MKVLVFSFFKTDVLYRLRELVPNTASDILSGDISPARRQEVIDEFSKDSNQTVLLAQIEA 678 Query: 119 CGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDE 178 G GLN+Q NI++ W QQ I R+ + G R V VY L+ +++IDE Sbjct: 679 GGVGLNIQ-SANIVILCEPQWKPSTEQQAISRV-----YRMGQTRDVLVYRLLTKDSIDE 732 Query: 179 LVLQRLRTK 187 ++ + K Sbjct: 733 PIMALIHKK 741 >gi|312877116|ref|ZP_07737087.1| SNF2-related protein [Caldicellulosiruptor lactoaceticus 6A] gi|311796090|gb|EFR12448.1| SNF2-related protein [Caldicellulosiruptor lactoaceticus 6A] Length = 1126 Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust. Identities = 24/94 (25%), Positives = 49/94 (52%), Gaps = 6/94 (6%) Query: 104 WNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKR 163 +N G+ + + G GLNL G ++++ + LWW+ +E + R + G + Sbjct: 1020 FNSGQKQVFLISLKAGGFGLNLT-GADVVILYDLWWN-----PAVENQAMDRAHRIGQEN 1073 Query: 164 AVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 +V V+ LI +NTI+E + + + K + D ++ + Sbjct: 1074 SVQVFRLITKNTIEERIFELQQKKKDLFDTIIQS 1107 >gi|307189408|gb|EFN73818.1| Putative DNA helicase Ino80 [Camponotus floridanus] Length = 1624 Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust. Identities = 28/80 (35%), Positives = 42/80 (52%), Gaps = 10/80 (12%) Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQM--IERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 G G+NL ++ + S W + Q M R+G T+Q V VY LI + TI+ Sbjct: 1157 GLGINLTAADTVIFYDSDWNPTVDQQAMDRAHRLGQTKQ--------VTVYRLICKGTIE 1208 Query: 178 ELVLQRLRTKSTIQDLLLNA 197 E +LQR R KS IQ ++++ Sbjct: 1209 ERILQRAREKSEIQRMVISG 1228 >gi|139438973|ref|ZP_01772433.1| Hypothetical protein COLAER_01439 [Collinsella aerofaciens ATCC 25986] gi|133775684|gb|EBA39504.1| Hypothetical protein COLAER_01439 [Collinsella aerofaciens ATCC 25986] Length = 1173 Score = 45.1 bits (105), Expect = 0.006, Method: Composition-based stats. Identities = 26/103 (25%), Positives = 54/103 (52%), Gaps = 9/103 (8%) Query: 101 IQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 + ++ G++P+ + G GLNL ++++ + WW++ Q +R + G Sbjct: 1061 VAQFQAGEVPVFLISLKAGGVGLNLT-AADVVIHYDPWWNVAAQDQATDR-----AHRIG 1114 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETI 203 + V VY LIA++TI+E + +R + + +DL+ + L + I Sbjct: 1115 QQHTVTVYKLIAKDTIEERI---MRMQESKRDLVNSVLGGDGI 1154 >gi|229489289|ref|ZP_04383153.1| SNF2 family helicase [Rhodococcus erythropolis SK121] gi|229323782|gb|EEN89539.1| SNF2 family helicase [Rhodococcus erythropolis SK121] Length = 1060 Score = 45.1 bits (105), Expect = 0.006, Method: Composition-based stats. Identities = 31/118 (26%), Positives = 55/118 (46%), Gaps = 7/118 (5%) Query: 80 DLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWW 139 D R+ ++ G T ++ ++E+ G +P+ + G GLNL + WW Sbjct: 932 DEERIPYSYLDGSTRNRGE-VLEEFKSGAVPVFLISLKAGGFGLNLTEADYCFIL-DPWW 989 Query: 140 DLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + Q ++R + G R V VY LIA++TI+E V+ KS + +++A Sbjct: 990 NPAAEAQAVDR-----THRIGQTRNVMVYRLIAKDTIEEKVMALKAKKSALFSNVMDA 1042 >gi|328867774|gb|EGG16155.1| SNF2-related domain-containing protein [Dictyostelium fasciculatum] Length = 2377 Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust. Identities = 25/84 (29%), Positives = 46/84 (54%), Gaps = 6/84 (7%) Query: 118 SCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 +CG G+NL + ++FF W+ +Q ++R + G +R V VY L+ + T++ Sbjct: 2091 ACGIGINLT-AADTVIFFDSDWNPTMDEQAMDRC-----HRLGQQRPVTVYRLVTKGTVE 2144 Query: 178 ELVLQRLRTKSTIQDLLLNALKKE 201 E V++R + K IQ +++ K E Sbjct: 2145 ERVIKRAKQKHQIQSIVIAGGKFE 2168 >gi|312170918|emb|CBX79177.1| SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 [Erwinia amylovora ATCC BAA-2158] Length = 852 Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust. Identities = 28/106 (26%), Positives = 54/106 (50%), Gaps = 7/106 (6%) Query: 91 GRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 G T D++ ++ + +G++P+ + G GLNL + ++ + WW+ Q +R Sbjct: 734 GATRDRNE-PVRSFQQGEVPVFLISLKAGGVGLNLT-AADTVIHYDPWWNPAAENQATDR 791 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + G + VFVY LIA TI+E ++ + K+ + + +LN Sbjct: 792 AW-----RLGQDKPVFVYKLIAAGTIEEKIVALQQQKADLAEEILN 832 >gi|292900753|ref|YP_003540122.1| helicase [Erwinia amylovora ATCC 49946] gi|291200601|emb|CBJ47732.1| putative helicase [Erwinia amylovora ATCC 49946] Length = 852 Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust. Identities = 28/106 (26%), Positives = 54/106 (50%), Gaps = 7/106 (6%) Query: 91 GRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 G T D++ ++ + +G++P+ + G GLNL + ++ + WW+ Q +R Sbjct: 734 GATRDRNE-PVRSFQQGEVPVFLISLKAGGVGLNLT-AADTVIHYDPWWNPAAENQATDR 791 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + G + VFVY LIA TI+E ++ + K+ + + +LN Sbjct: 792 AW-----RLGQDKPVFVYKLIAAGTIEEKIVALQQQKADLAEEILN 832 >gi|156538236|ref|XP_001602268.1| PREDICTED: similar to helicase [Nasonia vitripennis] Length = 1536 Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust. Identities = 28/80 (35%), Positives = 42/80 (52%), Gaps = 10/80 (12%) Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQM--IERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 G G+NL ++ + S W + Q M R+G T+Q V VY LI + TI+ Sbjct: 1137 GLGINLTAADTVIFYDSDWNPTVDQQAMDRAHRLGQTKQ--------VTVYRLICKGTIE 1188 Query: 178 ELVLQRLRTKSTIQDLLLNA 197 E +LQR R KS IQ ++++ Sbjct: 1189 ERILQRAREKSEIQRMVISG 1208 >gi|292486850|ref|YP_003529720.1| SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 [Erwinia amylovora CFBP1430] gi|291552267|emb|CBA19304.1| SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 [Erwinia amylovora CFBP1430] Length = 852 Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust. Identities = 28/106 (26%), Positives = 54/106 (50%), Gaps = 7/106 (6%) Query: 91 GRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 G T D++ ++ + +G++P+ + G GLNL + ++ + WW+ Q +R Sbjct: 734 GATRDRNE-PVRSFQQGEVPVFLISLKAGGVGLNLT-AADTVIHYDPWWNPAAENQATDR 791 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + G + VFVY LIA TI+E ++ + K+ + + +LN Sbjct: 792 AW-----RLGQDKPVFVYKLIAAGTIEEKIVALQQQKADLAEEILN 832 >gi|160935631|ref|ZP_02083006.1| hypothetical protein CLOBOL_00521 [Clostridium bolteae ATCC BAA-613] gi|158441375|gb|EDP19085.1| hypothetical protein CLOBOL_00521 [Clostridium bolteae ATCC BAA-613] Length = 1075 Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust. Identities = 25/95 (26%), Positives = 49/95 (51%), Gaps = 6/95 (6%) Query: 101 IQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 + ++ + ++P+ + G GLNL +I++ + WW++ Q +R + G Sbjct: 965 VGDFGKDEVPVFLISLKAGGTGLNLT-AADIVIHYDPWWNVAAQNQATDRT-----HRIG 1018 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 + V VY LI +NTI+E +L+ KS + D ++ Sbjct: 1019 QDKQVTVYKLITRNTIEENILKLQEAKSHLADAVV 1053 >gi|328786874|ref|XP_393832.4| PREDICTED: putative DNA helicase Ino80-like [Apis mellifera] Length = 1636 Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust. Identities = 28/80 (35%), Positives = 42/80 (52%), Gaps = 10/80 (12%) Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQM--IERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 G G+NL ++ + S W + Q M R+G T+Q V VY LI + TI+ Sbjct: 1178 GLGINLTAADTVIFYDSDWNPTVDQQAMDRAHRLGQTKQ--------VTVYRLICKGTIE 1229 Query: 178 ELVLQRLRTKSTIQDLLLNA 197 E +LQR R KS IQ ++++ Sbjct: 1230 ERILQRAREKSEIQRMVISG 1249 >gi|332024475|gb|EGI64673.1| Putative DNA helicase Ino80 [Acromyrmex echinatior] Length = 1115 Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust. Identities = 30/88 (34%), Positives = 46/88 (52%), Gaps = 12/88 (13%) Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQM--IERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 G G+NL ++ + S W + Q M R+G T+Q V VY LI + TI+ Sbjct: 644 GLGINLTAADTVIFYDSDWNPTVDQQAMDRAHRLGQTKQ--------VTVYRLICKGTIE 695 Query: 178 ELVLQRLRTKSTIQDLLLNA--LKKETI 203 E +LQR R KS IQ ++++ K +T+ Sbjct: 696 ERILQRAREKSEIQRMVISGGNFKPDTL 723 >gi|255564822|ref|XP_002523405.1| Helicase, putative [Ricinus communis] gi|223537355|gb|EEF38984.1| Helicase, putative [Ricinus communis] Length = 2029 Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust. Identities = 27/90 (30%), Positives = 48/90 (53%), Gaps = 6/90 (6%) Query: 108 KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFV 167 KI L S G G+NL +G + ++F+ W+ QQ +R + G R V + Sbjct: 1101 KIFLFILSTRSGGVGINL-FGADTVIFYDSDWNPAMDQQAQDRC-----HRIGQTREVHI 1154 Query: 168 YYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 Y LI+++TI+E +L++ K + DL++ + Sbjct: 1155 YRLISESTIEENILKKANQKRALDDLVIQS 1184 >gi|83649604|ref|YP_438039.1| SNF2 family DNA/RNA helicase [Hahella chejuensis KCTC 2396] gi|83637647|gb|ABC33614.1| Superfamily II DNA/RNA helicase, SNF2 family [Hahella chejuensis KCTC 2396] Length = 1106 Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust. Identities = 28/105 (26%), Positives = 49/105 (46%), Gaps = 7/105 (6%) Query: 91 GRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 G T D+D + + G++ L + G GLNL + + + WW+ +E Sbjct: 987 GATKDRD-TPVNRFQNGEVSLFLISLKAGGVGLNLTAADTV-IHYDPWWN-----PAVEN 1039 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 R + G + VFVY LI + T++E +++ + K + D LL Sbjct: 1040 QATDRAYRIGQDKPVFVYKLITEGTVEEKIVELQKQKQALADNLL 1084 >gi|168703233|ref|ZP_02735510.1| SNF2-related protein [Gemmata obscuriglobus UQM 2246] Length = 1098 Score = 45.1 bits (105), Expect = 0.006, Method: Composition-based stats. Identities = 31/112 (27%), Positives = 50/112 (44%), Gaps = 6/112 (5%) Query: 84 LQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEE 143 +Q + GRT D+D + + L + G GLNL + WW+ Sbjct: 973 IQFEYLDGRTRDRDKRVERFQTDPACKLFLVSLKAGGVGLNLT-AAEYVFLLDPWWNPAA 1031 Query: 144 HQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 Q I+R + G + VF Y LIA+ T++E VL+ ++K + D +L Sbjct: 1032 EAQAIDR-----SYRIGQTKPVFAYRLIARGTVEEKVLELQQSKRELADAIL 1078 >gi|120611497|ref|YP_971175.1| SNF2-like protein [Acidovorax citrulli AAC00-1] gi|120589961|gb|ABM33401.1| SNF2-related protein [Acidovorax citrulli AAC00-1] Length = 991 Score = 45.1 bits (105), Expect = 0.006, Method: Composition-based stats. Identities = 26/90 (28%), Positives = 45/90 (50%), Gaps = 6/90 (6%) Query: 106 EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 EG P+L A + G GLNL + ++ WW+ +Q R + G R V Sbjct: 857 EGSAPILLASLKAGGTGLNLT-AADTVIHLDPWWNPAVMEQ-----ASARAHRIGQDRPV 910 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 F+++L+A+ +I+E +L+ K + D +L Sbjct: 911 FIHHLVAEGSIEERMLELQARKQALADGVL 940 >gi|320587436|gb|EFW99916.1| DNA repair and recombination protein rad54 [Grosmannia clavigera kw1407] Length = 809 Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust. Identities = 28/85 (32%), Positives = 42/85 (49%), Gaps = 6/85 (7%) Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 G GLNL G N LV F W+ QQ + R+ + G K+ FVY IA TI+E Sbjct: 643 GCGLNL-IGANRLVLFDPDWNPAADQQALARVW-----RDGQKKDCFVYRFIATGTIEEK 696 Query: 180 VLQRLRTKSTIQDLLLNALKKETIH 204 + QR K ++ +++A + + Sbjct: 697 IFQRQSHKQSLSTCVVDAAAGDDVE 721 >gi|24373219|ref|NP_717262.1| Snf2 family protein [Shewanella oneidensis MR-1] gi|24347445|gb|AAN54706.1|AE015611_4 Snf2 family protein [Shewanella oneidensis MR-1] Length = 1070 Score = 45.1 bits (105), Expect = 0.007, Method: Compositional matrix adjust. Identities = 27/97 (27%), Positives = 46/97 (47%), Gaps = 6/97 (6%) Query: 101 IQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 I ++ EG P+ + G GLNL + ++ + WW+ ER R + G Sbjct: 962 IDKFQEGDTPVFLISLKAGGTGLNLT-AADTVIHYDPWWN-----PAAERQATDRAHRIG 1015 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + VFVY LIA+ T++E + + + K + D +L Sbjct: 1016 QENPVFVYKLIAEGTVEEKIQEMQQHKQGLADSILEG 1052 >gi|256828244|ref|YP_003156972.1| Non-specific serine/threonine protein kinase [Desulfomicrobium baculatum DSM 4028] gi|256577420|gb|ACU88556.1| Non-specific serine/threonine protein kinase [Desulfomicrobium baculatum DSM 4028] Length = 1068 Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust. Identities = 25/91 (27%), Positives = 44/91 (48%), Gaps = 6/91 (6%) Query: 105 NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA 164 N +IP+ + G GLNL + ++ + WW+ +E R + G R Sbjct: 964 NTPEIPIFLISLKAGGTGLNLT-SADYVIHYDPWWN-----PAVEDQATDRTHRIGQTRQ 1017 Query: 165 VFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 VF Y +I +NT++E +L+ +K I D ++ Sbjct: 1018 VFAYKMICENTVEEKILKLQESKKGIADSII 1048 >gi|269302622|gb|ACZ32722.1| SNF2/helicase domain protein [Chlamydophila pneumoniae LPCoLN] Length = 1215 Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust. Identities = 22/88 (25%), Positives = 47/88 (53%), Gaps = 6/88 (6%) Query: 118 SCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 + G G+NL GN+++ + WW+ + Q ++R+ + G K VF+Y LI ++T++ Sbjct: 1092 AAGTGINLT-AGNVVIMYDRWWNPAKENQALDRV-----HRIGQKNTVFIYKLITEDTLE 1145 Query: 178 ELVLQRLRTKSTIQDLLLNALKKETIHV 205 E + + K + D ++ + +H+ Sbjct: 1146 ERIHYLIEKKIRLLDKVIASQDSNILHM 1173 >gi|297155115|gb|ADI04827.1| SNF2/RAD54 family helicase [Streptomyces bingchenggensis BCW-1] Length = 1008 Score = 44.7 bits (104), Expect = 0.007, Method: Composition-based stats. Identities = 26/97 (26%), Positives = 47/97 (48%), Gaps = 6/97 (6%) Query: 101 IQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 + + EG++P+ + G GLNL G++ V + WW+ +E R + G Sbjct: 894 VDRFQEGEVPVFLLSLKAAGTGLNLTRAGHV-VHYDRWWN-----PAVEAQATDRAYRIG 947 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + V V+ LIA+ T+++ + L K + D +L A Sbjct: 948 QTQPVQVHRLIAEGTVEDRIAAILERKRELADAVLGA 984 >gi|329922954|ref|ZP_08278470.1| SNF2 family N-terminal domain protein [Paenibacillus sp. HGF5] gi|328941727|gb|EGG38012.1| SNF2 family N-terminal domain protein [Paenibacillus sp. HGF5] Length = 1111 Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust. Identities = 28/94 (29%), Positives = 51/94 (54%), Gaps = 7/94 (7%) Query: 102 QEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGF 161 + +NEG+ + + G GLNL G + ++ + LWW+ QQ ++R + G Sbjct: 1001 ERFNEGEREVFLISLKAGGTGLNLT-GADTVILYDLWWNPAVEQQAMDR-----AHRIGQ 1054 Query: 162 KRAVFVYYLIAQNTI-DELVLQRLRTKSTIQDLL 194 K+ V V +AQ+TI D++V + + K I++L+ Sbjct: 1055 KKVVQVIRFVAQDTIEDKMVALQQKKKDLIEELV 1088 >gi|254304002|ref|ZP_04971360.1| SWF/SNF family helicase [Fusobacterium nucleatum subsp. polymorphum ATCC 10953] gi|148324194|gb|EDK89444.1| SWF/SNF family helicase [Fusobacterium nucleatum subsp. polymorphum ATCC 10953] Length = 401 Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust. Identities = 38/137 (27%), Positives = 63/137 (45%), Gaps = 14/137 (10%) Query: 65 KANA-APIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNE-----GKIPLLFAHPAS 118 +AN A I++ Y+FN + ++K + I ++++ GK L+ + Sbjct: 262 RANTEANILIFYNFNREAREIKKIIKVDFEVSGAVSNIPKFDDYDTLKGKTTLV--QIQA 319 Query: 119 CGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDE 178 G G+ LQY + +FFS W +++ Q + R + G K V VY I + TI+E Sbjct: 320 GGAGIELQYNSEV-IFFSPTWSFQDYSQ-----ALGRAYRIGQKNKVTVYKYIGKRTIEE 373 Query: 179 LVLQRLRTKSTIQDLLL 195 V RL K + LL Sbjct: 374 RVYARLDEKKDFAEKLL 390 >gi|15618744|ref|NP_225030.1| SWI/SNF family helicase_1 [Chlamydophila pneumoniae CWL029] gi|16752203|ref|NP_445571.1| Snf2/Rad54 family helicase [Chlamydophila pneumoniae AR39] gi|33242195|ref|NP_877136.1| SNF protein [Chlamydophila pneumoniae TW-183] gi|4377149|gb|AAD18973.1| SWI/SNF family helicase_1 [Chlamydophila pneumoniae CWL029] gi|7189947|gb|AAF38809.1| helicase, Snf2/Rad54 family [Chlamydophila pneumoniae AR39] gi|33236706|gb|AAP98793.1| SNF protein [Chlamydophila pneumoniae TW-183] Length = 1215 Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust. Identities = 22/88 (25%), Positives = 47/88 (53%), Gaps = 6/88 (6%) Query: 118 SCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 + G G+NL GN+++ + WW+ + Q ++R+ + G K VF+Y LI ++T++ Sbjct: 1092 AAGTGINLT-AGNVVIMYDRWWNPAKENQALDRV-----HRIGQKNTVFIYKLITEDTLE 1145 Query: 178 ELVLQRLRTKSTIQDLLLNALKKETIHV 205 E + + K + D ++ + +H+ Sbjct: 1146 ERIHYLIEKKIRLLDKVIASQDSNILHM 1173 >gi|238063663|ref|ZP_04608372.1| SNF2/RAD54 family helicase [Micromonospora sp. ATCC 39149] gi|237885474|gb|EEP74302.1| SNF2/RAD54 family helicase [Micromonospora sp. ATCC 39149] Length = 929 Score = 44.7 bits (104), Expect = 0.007, Method: Composition-based stats. Identities = 41/180 (22%), Positives = 76/180 (42%), Gaps = 25/180 (13%) Query: 34 QLANGAVYYDEEKHWKEV-HDEKIKAL----EVIIEKANAAPIIVAYHFNSDLARL---- 84 Q+ N +Y +E H + EK+ L E I+ + A + Y +ARL Sbjct: 736 QVCNHPAHYLKEPHGRLTGRSEKLHLLDDLLETILAEEGGALVFTQY---VQMARLLKRH 792 Query: 85 --QKAFPQ-----GRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSL 137 ++ P G + + ++ + G++P+ + G GLNL ++ + F Sbjct: 793 LAERGVPAQLLHGGTPVPQREEMVRRFQAGEVPVFLLSLKAAGTGLNLTRADHV-IHFDR 851 Query: 138 WWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 WW+ +E R + G + V V+ LIAQ T+++ + L +K + D +L Sbjct: 852 WWN-----PAVEEQATDRAYRIGQTKPVQVHRLIAQGTLEDRIAALLESKRELADAVLTG 906 >gi|323697573|ref|ZP_08109485.1| SNF2-related protein [Desulfovibrio sp. ND132] gi|323457505|gb|EGB13370.1| SNF2-related protein [Desulfovibrio desulfuricans ND132] Length = 1069 Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust. Identities = 30/106 (28%), Positives = 51/106 (48%), Gaps = 10/106 (9%) Query: 101 IQEWNEGK-IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQA 159 + +NE IP+ + G GLNL + ++ + WW+ +E R + Sbjct: 960 VDRFNENPDIPIFLISLKAGGTGLNLT-SADYVIHYDPWWN-----PAVENQATDRTHRI 1013 Query: 160 GFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL---NALKKET 202 G KR VF Y +I QNT++E +L+ K + + ++ +ALK T Sbjct: 1014 GQKRQVFAYKMIRQNTVEERILKLQEQKKDVAEAIIPGQSALKSLT 1059 >gi|217076139|ref|YP_002333855.1| helicase [Thermosipho africanus TCF52B] gi|217035992|gb|ACJ74514.1| helicase [Thermosipho africanus TCF52B] Length = 835 Score = 44.7 bits (104), Expect = 0.008, Method: Compositional matrix adjust. Identities = 47/188 (25%), Positives = 85/188 (45%), Gaps = 27/188 (14%) Query: 30 VKCLQLAN-GAVYYDEE--KH----------WKEVHDEKIKALEVIIEKANAAPIIVAYH 76 +K LQ+ + GA Y+DE KH E+ ++K KAL I K I+ Sbjct: 641 IKLLQVCDFGADYFDENFYKHSGKLNKLKDLMIEIKNKKEKAL--IFTKFIMTQQIIKAF 698 Query: 77 FNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFS 136 ++L + ++ ++++N+GKI +L +P G GLNL N ++ ++ Sbjct: 699 LRNELGIESEILNGTVPIETRNYIVKQFNDGKIDVLIINPRVGGVGLNL-VAANHVIHYT 757 Query: 137 LWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQ------NTIDELVLQRLRTKSTI 190 W+ Q R + G + V+VYY ++ TI+E ++ L K I Sbjct: 758 PEWNPAVTSQ-----ATDRAYRIGQDKDVYVYYFFSKFRNNHNKTIEEYFMKLLERKKQI 812 Query: 191 QDLLLNAL 198 +++LL+ + Sbjct: 813 KNILLDNI 820 >gi|270014503|gb|EFA10951.1| hypothetical protein TcasGA2_TC004111 [Tribolium castaneum] Length = 1441 Score = 44.7 bits (104), Expect = 0.008, Method: Compositional matrix adjust. Identities = 28/80 (35%), Positives = 42/80 (52%), Gaps = 10/80 (12%) Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQM--IERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 G G+NL ++ + S W + Q M R+G T+Q V VY LI + +I+ Sbjct: 1167 GLGINLTAADTVIFYDSDWNPTVDQQAMDRAHRLGQTKQ--------VTVYRLICKGSIE 1218 Query: 178 ELVLQRLRTKSTIQDLLLNA 197 E +LQR R KS IQ L+++ Sbjct: 1219 ERILQRAREKSEIQKLVISG 1238 >gi|315639730|ref|ZP_07894869.1| Snf2 family protein [Enterococcus italicus DSM 15952] gi|315484507|gb|EFU74964.1| Snf2 family protein [Enterococcus italicus DSM 15952] Length = 1055 Score = 44.7 bits (104), Expect = 0.008, Method: Compositional matrix adjust. Identities = 35/135 (25%), Positives = 63/135 (46%), Gaps = 17/135 (12%) Query: 54 EKIKALEVIIEKANAAPIIVAYHFNSDLA---------RLQKAFPQGRTLDKDPC-TIQE 103 E++K L ++ K N +++ F S L+ L + +G T KD + Sbjct: 887 EQVKDL-LLAAKENKRRVLLFSQFTSMLSLIADELDEMGLSHFYLRGSTPPKDRIEMVDA 945 Query: 104 WNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKR 163 +NEG+ + + G GLNL G N ++ + LWW+ +E R + G K+ Sbjct: 946 FNEGEADVFLISLKAGGTGLNLT-GANTVILYDLWWN-----PAVEEQAAGRAHRMGQKQ 999 Query: 164 AVFVYYLIAQNTIDE 178 V ++ +I++ TI+E Sbjct: 1000 VVEIWRMISEGTIEE 1014 >gi|189233685|ref|XP_970280.2| PREDICTED: similar to helicase [Tribolium castaneum] Length = 1427 Score = 44.7 bits (104), Expect = 0.008, Method: Compositional matrix adjust. Identities = 28/80 (35%), Positives = 42/80 (52%), Gaps = 10/80 (12%) Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQM--IERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 G G+NL ++ + S W + Q M R+G T+Q V VY LI + +I+ Sbjct: 1153 GLGINLTAADTVIFYDSDWNPTVDQQAMDRAHRLGQTKQ--------VTVYRLICKGSIE 1204 Query: 178 ELVLQRLRTKSTIQDLLLNA 197 E +LQR R KS IQ L+++ Sbjct: 1205 ERILQRAREKSEIQKLVISG 1224 >gi|255659992|ref|ZP_05405401.1| helicase, Snf2 family [Mitsuokella multacida DSM 20544] gi|260847745|gb|EEX67752.1| helicase, Snf2 family [Mitsuokella multacida DSM 20544] Length = 1078 Score = 44.7 bits (104), Expect = 0.008, Method: Compositional matrix adjust. Identities = 25/96 (26%), Positives = 48/96 (50%), Gaps = 6/96 (6%) Query: 101 IQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 ++E+N G +P+ + G GLNL G +++V F WW+ +E R + G Sbjct: 969 VREFNRGAVPIFLISLKAGGTGLNLT-GADMVVHFDPWWN-----PAVEDQATDRAYRLG 1022 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + V V+ LI + T++E + + K ++ D ++ Sbjct: 1023 QRNNVQVFKLIMKGTVEEKIYELQEKKKSLIDQMIQ 1058 >gi|239623482|ref|ZP_04666513.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47_FAA] gi|239521513|gb|EEQ61379.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47FAA] Length = 1088 Score = 44.7 bits (104), Expect = 0.008, Method: Compositional matrix adjust. Identities = 25/96 (26%), Positives = 48/96 (50%), Gaps = 6/96 (6%) Query: 101 IQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 + E+ +P+ + G GLNL +I++ + WW++ Q +R + G Sbjct: 975 VGEFQRDDVPVFLISLKAGGTGLNLT-AADIVIHYDPWWNVAAQNQATDRT-----HRIG 1028 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 ++ V VY LI +NTI+E +L+ +K + D ++ Sbjct: 1029 QEKQVTVYKLITRNTIEENILKLQESKQYLADQIVT 1064 >gi|123977009|ref|XP_001330686.1| SNF2 family N-terminal domain containing protein [Trichomonas vaginalis G3] gi|121897321|gb|EAY02446.1| SNF2 family N-terminal domain containing protein [Trichomonas vaginalis G3] Length = 1326 Score = 44.7 bits (104), Expect = 0.008, Method: Compositional matrix adjust. Identities = 26/82 (31%), Positives = 42/82 (51%), Gaps = 6/82 (7%) Query: 111 LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYL 170 L A ++ GHG+NL N++VFF L W+ Q +R+ + G K+ V +Y + Sbjct: 1196 LFIATKSAAGHGINLT-AANVVVFFELNWNPAIDLQAEDRV-----HRIGQKKQVRIYSI 1249 Query: 171 IAQNTIDELVLQRLRTKSTIQD 192 + + TIDE + + K I D Sbjct: 1250 VMEGTIDERIENSQKRKKMIMD 1271 >gi|171915800|ref|ZP_02931270.1| probable helicase [Verrucomicrobium spinosum DSM 4136] Length = 896 Score = 44.7 bits (104), Expect = 0.008, Method: Compositional matrix adjust. Identities = 26/97 (26%), Positives = 48/97 (49%), Gaps = 6/97 (6%) Query: 101 IQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 ++++ G +P+ + G G+ L + ++ + WW+ IE R + G Sbjct: 787 VEQFQNGDMPVFLISLKAGGVGITLT-AADTVIHYDPWWN-----PAIEAQATDRAYRIG 840 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 K+ VFV+ LI Q TI+E +++ R KS + + LL Sbjct: 841 QKKPVFVHKLICQGTIEERIVEMQRRKSALINGLLTG 877 >gi|90409119|ref|ZP_01217240.1| Snf2 family protein [Psychromonas sp. CNPT3] gi|90309770|gb|EAS37934.1| Snf2 family protein [Psychromonas sp. CNPT3] Length = 1080 Score = 44.7 bits (104), Expect = 0.008, Method: Compositional matrix adjust. Identities = 26/91 (28%), Positives = 45/91 (49%), Gaps = 7/91 (7%) Query: 91 GRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 G+T D+ I+ + G++P+ + G GLNL + ++ + WW+ +E Sbjct: 960 GQTRDRG-AIIERFQSGEVPIFLISLKAGGVGLNLT-AADTVIHYDPWWN-----PAVEN 1012 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVL 181 R + G + VFVY LI + T++E VL Sbjct: 1013 QATDRAYRIGQDKPVFVYKLICEQTVEERVL 1043 >gi|326317215|ref|YP_004234887.1| SNF2-like protein [Acidovorax avenae subsp. avenae ATCC 19860] gi|323374051|gb|ADX46320.1| SNF2-related protein [Acidovorax avenae subsp. avenae ATCC 19860] Length = 947 Score = 44.7 bits (104), Expect = 0.008, Method: Composition-based stats. Identities = 27/90 (30%), Positives = 45/90 (50%), Gaps = 6/90 (6%) Query: 106 EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 EG P+L A + G GLNL + +V WW+ +Q R + G + V Sbjct: 813 EGSAPILLASLKAGGTGLNLT-AADTVVHLDPWWNPAVMEQ-----ASARAHRIGQDKPV 866 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 FV++L+A+ +I+E +L+ K + D +L Sbjct: 867 FVHHLVAEGSIEERMLELQARKQALADGVL 896 >gi|308472052|ref|XP_003098255.1| hypothetical protein CRE_08427 [Caenorhabditis remanei] gi|308269241|gb|EFP13194.1| hypothetical protein CRE_08427 [Caenorhabditis remanei] Length = 205 Score = 44.7 bits (104), Expect = 0.008, Method: Compositional matrix adjust. Identities = 28/91 (30%), Positives = 48/91 (52%), Gaps = 6/91 (6%) Query: 107 GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVF 166 G ++ + G GLNL GGN L+ L W+ QQ +RI + G K+ VF Sbjct: 101 GGAKVMLLSLTAGGVGLNL-TGGNHLIMIDLHWNPALEQQAFDRI-----YRMGQKKPVF 154 Query: 167 VYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 ++ LI + TI++ V++ ++K T+ +L+ Sbjct: 155 IHRLITKGTIEQRVVELQKSKLTLASSVLDG 185 >gi|291436286|ref|ZP_06575676.1| SNF2/RAD54 family helicase [Streptomyces ghanaensis ATCC 14672] gi|291339181|gb|EFE66137.1| SNF2/RAD54 family helicase [Streptomyces ghanaensis ATCC 14672] Length = 692 Score = 44.7 bits (104), Expect = 0.009, Method: Composition-based stats. Identities = 25/97 (25%), Positives = 47/97 (48%), Gaps = 6/97 (6%) Query: 101 IQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 + + G P+L + G GLNL G++ V F WW+ +E R + G Sbjct: 579 VDRFQSGATPVLVLSLKAAGTGLNLTRAGHV-VHFDRWWN-----PAVEEQATDRAYRIG 632 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + V V+ LI + T+++ + + L++K + D +L + Sbjct: 633 QTQPVQVHRLITEGTVEDRIAEMLQSKRALADAILGS 669 >gi|289768102|ref|ZP_06527480.1| helicase [Streptomyces lividans TK24] gi|289698301|gb|EFD65730.1| helicase [Streptomyces lividans TK24] Length = 974 Score = 44.7 bits (104), Expect = 0.009, Method: Composition-based stats. Identities = 25/97 (25%), Positives = 47/97 (48%), Gaps = 6/97 (6%) Query: 101 IQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 + + G P+L + G GLNL G++ V F WW+ +E R + G Sbjct: 861 VDRFQSGATPVLVLSLKAAGTGLNLTRAGHV-VHFDRWWN-----PAVEEQATDRAYRIG 914 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + V V+ LI + T+++ + + L++K + D +L + Sbjct: 915 QTQPVQVHRLITEGTVEDRIAEMLQSKRALADAILGS 951 >gi|256784218|ref|ZP_05522649.1| helicase [Streptomyces lividans TK24] Length = 979 Score = 44.7 bits (104), Expect = 0.009, Method: Composition-based stats. Identities = 25/97 (25%), Positives = 47/97 (48%), Gaps = 6/97 (6%) Query: 101 IQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 + + G P+L + G GLNL G++ V F WW+ +E R + G Sbjct: 866 VDRFQSGATPVLVLSLKAAGTGLNLTRAGHV-VHFDRWWN-----PAVEEQATDRAYRIG 919 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + V V+ LI + T+++ + + L++K + D +L + Sbjct: 920 QTQPVQVHRLITEGTVEDRIAEMLQSKRALADAILGS 956 >gi|239927952|ref|ZP_04684905.1| helicase [Streptomyces ghanaensis ATCC 14672] Length = 701 Score = 44.7 bits (104), Expect = 0.009, Method: Composition-based stats. Identities = 25/97 (25%), Positives = 47/97 (48%), Gaps = 6/97 (6%) Query: 101 IQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 + + G P+L + G GLNL G++ V F WW+ +E R + G Sbjct: 588 VDRFQSGATPVLVLSLKAAGTGLNLTRAGHV-VHFDRWWN-----PAVEEQATDRAYRIG 641 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + V V+ LI + T+++ + + L++K + D +L + Sbjct: 642 QTQPVQVHRLITEGTVEDRIAEMLQSKRALADAILGS 678 >gi|21224583|ref|NP_630362.1| helicase [Streptomyces coelicolor A3(2)] gi|6273667|emb|CAB60181.1| putative helicase [Streptomyces coelicolor A3(2)] Length = 977 Score = 44.7 bits (104), Expect = 0.009, Method: Composition-based stats. Identities = 25/97 (25%), Positives = 47/97 (48%), Gaps = 6/97 (6%) Query: 101 IQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 + + G P+L + G GLNL G++ V F WW+ +E R + G Sbjct: 864 VDRFQSGATPVLVLSLKAAGTGLNLTRAGHV-VHFDRWWN-----PAVEEQATDRAYRIG 917 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + V V+ LI + T+++ + + L++K + D +L + Sbjct: 918 QTQPVQVHRLITEGTVEDRIAEMLQSKRALADAILGS 954 >gi|330819988|ref|YP_004348850.1| SNF2-related protein [Burkholderia gladioli BSR3] gi|327371983|gb|AEA63338.1| SNF2-related protein [Burkholderia gladioli BSR3] Length = 1119 Score = 44.7 bits (104), Expect = 0.009, Method: Composition-based stats. Identities = 29/117 (24%), Positives = 53/117 (45%), Gaps = 7/117 (5%) Query: 80 DLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWW 139 D A + G T D+ +Q + +G++PL + G GLNL + ++ + WW Sbjct: 969 DAAGIAHVMLTGDTTDR-VTPVQRFQQGEVPLFLISLKAGGVGLNLT-AADTVIHYDPWW 1026 Query: 140 DLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + +E R + G + VFVY LI +++E +L K+ + +L+ Sbjct: 1027 N-----PSVENQATDRAHRLGQDKPVFVYKLIVAGSVEEKILVLQEQKAALASAILS 1078 >gi|313902711|ref|ZP_07836109.1| SNF2-related protein [Thermaerobacter subterraneus DSM 13965] gi|313467008|gb|EFR62524.1| SNF2-related protein [Thermaerobacter subterraneus DSM 13965] Length = 1191 Score = 44.7 bits (104), Expect = 0.009, Method: Composition-based stats. Identities = 26/92 (28%), Positives = 42/92 (45%), Gaps = 6/92 (6%) Query: 104 WNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKR 163 + EG +P+ + G GLNL + ++ + WW+ +Q R + G R Sbjct: 1084 FQEGDVPVFLISLKAGGTGLNLT-AASYVIHYDPWWNPAAEEQ-----ATGRAHRIGQDR 1137 Query: 164 AVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 VF Y LI + T++E +LQ K + LL Sbjct: 1138 PVFSYKLITRGTVEEKILQLQEQKRALAGALL 1169 >gi|302695791|ref|XP_003037574.1| hypothetical protein SCHCODRAFT_65034 [Schizophyllum commune H4-8] gi|300111271|gb|EFJ02672.1| hypothetical protein SCHCODRAFT_65034 [Schizophyllum commune H4-8] Length = 1161 Score = 44.7 bits (104), Expect = 0.009, Method: Compositional matrix adjust. Identities = 28/81 (34%), Positives = 44/81 (54%), Gaps = 12/81 (14%) Query: 118 SCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER---IGVTRQRQAGFKRAVFVYYLIAQN 174 + G G+NL + +VF+ W+ Q ++R +G TRQ V VY LI +N Sbjct: 989 AGGVGINLT-AADTVVFYDHDWNPSNDAQAMDRAHRLGQTRQ--------VTVYRLICRN 1039 Query: 175 TIDELVLQRLRTKSTIQDLLL 195 T+DE VL+ R K +QD+++ Sbjct: 1040 TVDERVLKMARRKKDVQDVVV 1060 >gi|170084045|ref|XP_001873246.1| SNF2 family DNA-dependent ATPase [Laccaria bicolor S238N-H82] gi|164650798|gb|EDR15038.1| SNF2 family DNA-dependent ATPase [Laccaria bicolor S238N-H82] Length = 1573 Score = 44.7 bits (104), Expect = 0.009, Method: Compositional matrix adjust. Identities = 27/81 (33%), Positives = 43/81 (53%), Gaps = 12/81 (14%) Query: 118 SCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER---IGVTRQRQAGFKRAVFVYYLIAQN 174 + G G+NL + +VF+ W+ Q ++R +G TRQ V VY LI + Sbjct: 1393 AGGLGINLT-AADTVVFYDHDWNPSNDAQAMDRAHRLGQTRQ--------VTVYRLITKG 1443 Query: 175 TIDELVLQRLRTKSTIQDLLL 195 TIDE ++Q R K +QD+++ Sbjct: 1444 TIDERIIQLARVKKDVQDIVV 1464 >gi|317131242|ref|YP_004090556.1| SNF2-related protein [Ethanoligenens harbinense YUAN-3] gi|315469221|gb|ADU25825.1| SNF2-related protein [Ethanoligenens harbinense YUAN-3] Length = 1081 Score = 44.7 bits (104), Expect = 0.009, Method: Compositional matrix adjust. Identities = 26/93 (27%), Positives = 48/93 (51%), Gaps = 6/93 (6%) Query: 104 WNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKR 163 +N P+ + G GLNL +I++ + WW++ Q +R + G K Sbjct: 968 FNNDDTPVFLISLKAGGTGLNLT-AADIVIHYDPWWNVSAQNQATDR-----AHRIGQKS 1021 Query: 164 AVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 +V VY LIA++TI+E +L+ + K + D +++ Sbjct: 1022 SVQVYKLIAKDTIEEKILKLQQDKLKLADSVIS 1054 >gi|270285639|ref|ZP_06195033.1| SNF2 family helicase [Chlamydia muridarum Nigg] gi|270289648|ref|ZP_06195950.1| SNF2 family helicase [Chlamydia muridarum Weiss] gi|301337035|ref|ZP_07225237.1| SNF2 family helicase [Chlamydia muridarum MopnTet14] Length = 1199 Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust. Identities = 30/128 (23%), Positives = 64/128 (50%), Gaps = 14/128 (10%) Query: 84 LQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEE 143 +Q A QG++ ++ + N+ + + G G+NL GN+++ + WW+ + Sbjct: 1055 IQYALVQGKSQNRKEEIDRFSNDPNCRVFIGSLLAAGTGINLT-AGNVVIMYDRWWNPAK 1113 Query: 144 HQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELV-------LQRLRTKSTIQDL-LL 195 Q ++R+ + G K VF+Y L+ ++T++E + ++ L +T QD +L Sbjct: 1114 ENQALDRV-----HRIGQKNTVFIYKLVTEDTLEEHIHYLIEKKMRLLNQVTTTQDSNIL 1168 Query: 196 NALKKETI 203 + L +E + Sbjct: 1169 HVLNREDL 1176 >gi|86741104|ref|YP_481504.1| SNF2-related [Frankia sp. CcI3] gi|86567966|gb|ABD11775.1| SNF2-related [Frankia sp. CcI3] Length = 1163 Score = 44.3 bits (103), Expect = 0.009, Method: Composition-based stats. Identities = 29/113 (25%), Positives = 53/113 (46%), Gaps = 11/113 (9%) Query: 84 LQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEE 143 ++ + GRT D+ ++ + G P+ + G GLNL + WW+ Sbjct: 1039 VEHCYLDGRTRDRS-TVLERFKTGSAPVFLVSLKAGGFGLNLTEA-DYCFLLDPWWNPAT 1096 Query: 144 HQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVL----QRLRTKSTIQD 192 +Q ++R + G R V VY L+A++TI+E V+ ++ R S++ D Sbjct: 1097 EEQAVDR-----THRIGQSRNVMVYRLVARDTIEEKVMAMKDRKARLFSSVMD 1144 >gi|317122409|ref|YP_004102412.1| SNF2-related protein [Thermaerobacter marianensis DSM 12885] gi|315592389|gb|ADU51685.1| SNF2-related protein [Thermaerobacter marianensis DSM 12885] Length = 1191 Score = 44.3 bits (103), Expect = 0.009, Method: Composition-based stats. Identities = 26/92 (28%), Positives = 42/92 (45%), Gaps = 6/92 (6%) Query: 104 WNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKR 163 + EG +P+ + G GLNL + ++ + WW+ +E R + G R Sbjct: 1084 FQEGDVPVFLISLKAGGTGLNLT-AASYVIHYDPWWN-----PAVEEQATGRAHRIGQDR 1137 Query: 164 AVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 VF Y LI + T++E +LQ K + LL Sbjct: 1138 PVFSYKLITRGTVEEKILQLQEQKRALAGALL 1169 >gi|15835457|ref|NP_297216.1| SNF2 family helicase [Chlamydia muridarum Nigg] gi|8163332|gb|AAF73609.1| helicase, Snf2 family [Chlamydia muridarum Nigg] Length = 1202 Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust. Identities = 30/128 (23%), Positives = 64/128 (50%), Gaps = 14/128 (10%) Query: 84 LQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEE 143 +Q A QG++ ++ + N+ + + G G+NL GN+++ + WW+ + Sbjct: 1058 IQYALVQGKSQNRKEEIDRFSNDPNCRVFIGSLLAAGTGINLT-AGNVVIMYDRWWNPAK 1116 Query: 144 HQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELV-------LQRLRTKSTIQDL-LL 195 Q ++R+ + G K VF+Y L+ ++T++E + ++ L +T QD +L Sbjct: 1117 ENQALDRV-----HRIGQKNTVFIYKLVTEDTLEEHIHYLIEKKMRLLNQVTTTQDSNIL 1171 Query: 196 NALKKETI 203 + L +E + Sbjct: 1172 HVLNREDL 1179 >gi|315122947|ref|YP_004064953.1| DNA helicase [Pseudoalteromonas sp. SM9913] gi|315016707|gb|ADT70044.1| DNA helicase [Pseudoalteromonas sp. SM9913] Length = 1058 Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust. Identities = 30/105 (28%), Positives = 46/105 (43%), Gaps = 7/105 (6%) Query: 91 GRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 G+T +D I E+ G + + G GLNL + + F WW+ +E+ Sbjct: 940 GQTRHRDKV-IDEFTSGNTSVFLISLKAGGTGLNLTQADTV-IHFDPWWN-----PAVEK 992 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 R + G VFVY LI N+I++ V Q + K + D L Sbjct: 993 QATDRAYRIGQTNPVFVYKLIMANSIEQKVFQMQQDKQALVDALF 1037 >gi|332035338|gb|EGI71840.1| Snf2 family protein [Pseudoalteromonas haloplanktis ANT/505] Length = 155 Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust. Identities = 30/106 (28%), Positives = 47/106 (44%), Gaps = 7/106 (6%) Query: 91 GRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 G+T +D I E+ GK + + G GLNL + + F WW+ +E+ Sbjct: 37 GQTRQRDKV-IDEFTSGKTSVFLISLKAGGTGLNLTQADTV-IHFDPWWN-----PAVEK 89 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 R + G VFVY LI N+I++ V + + K + D L Sbjct: 90 QATDRAYRIGQTNPVFVYKLIMSNSIEQKVFKMQQDKQALVDALFT 135 >gi|110639993|ref|YP_680203.1| SNF2 family DNA/RNA helicase [Cytophaga hutchinsonii ATCC 33406] gi|110282674|gb|ABG60860.1| superfamily II DNA/RNA helicase, SNF2 family [Cytophaga hutchinsonii ATCC 33406] Length = 977 Score = 44.3 bits (103), Expect = 0.010, Method: Compositional matrix adjust. Identities = 36/132 (27%), Positives = 58/132 (43%), Gaps = 13/132 (9%) Query: 80 DLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWW 139 D A ++ A+ G+T D+ + NE I + + G GLNL + + WW Sbjct: 848 DKAGIKYAYLDGQTRDRQAEVERFQNEEGIRVFLISLKAGGLGLNLT-AADYVFLLDPWW 906 Query: 140 DLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN--- 196 + +E V R + G K VF Y I +NT++E +L + K + + L++ Sbjct: 907 N-----PAVEAQAVDRAYRIGQKNTVFTYKFITKNTVEEKILNLQKNKLKLANDLISSEE 961 Query: 197 ----ALKKETIH 204 AL KE I Sbjct: 962 TFFKALSKEDIQ 973 >gi|29840686|ref|NP_829792.1| Snf2/Rad54 family helicase [Chlamydophila caviae GPIC] gi|29835036|gb|AAP05670.1| helicase, Snf2/Rad54 family [Chlamydophila caviae GPIC] Length = 1205 Score = 44.3 bits (103), Expect = 0.010, Method: Compositional matrix adjust. Identities = 21/88 (23%), Positives = 47/88 (53%), Gaps = 6/88 (6%) Query: 118 SCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 + G G+NL GN+++ + WW+ + Q ++R+ + G K VF+Y L+ ++T++ Sbjct: 1090 AAGTGINLT-AGNVVIMYDRWWNPAKENQALDRV-----HRIGQKNTVFIYKLMTEDTLE 1143 Query: 178 ELVLQRLRTKSTIQDLLLNALKKETIHV 205 E + + K + D +++ +H+ Sbjct: 1144 ERIHYLIEKKIRLLDKVISTQNSNILHM 1171 >gi|299755713|ref|XP_001828834.2| DNA ATP-dependent helicase [Coprinopsis cinerea okayama7#130] gi|298411348|gb|EAU92841.2| DNA ATP-dependent helicase [Coprinopsis cinerea okayama7#130] Length = 1625 Score = 44.3 bits (103), Expect = 0.010, Method: Compositional matrix adjust. Identities = 26/81 (32%), Positives = 43/81 (53%), Gaps = 12/81 (14%) Query: 118 SCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER---IGVTRQRQAGFKRAVFVYYLIAQN 174 + G G+NL + ++F+ W+ Q ++R +G TRQ V VY LI + Sbjct: 1431 AGGLGINLT-AADTVIFYDHDWNPSNDAQAMDRAHRLGQTRQ--------VTVYRLITKG 1481 Query: 175 TIDELVLQRLRTKSTIQDLLL 195 TIDE ++Q R K +QD+++ Sbjct: 1482 TIDERIIQLARVKKDVQDIVV 1502 >gi|302780671|ref|XP_002972110.1| hypothetical protein SELMODRAFT_412612 [Selaginella moellendorffii] gi|300160409|gb|EFJ27027.1| hypothetical protein SELMODRAFT_412612 [Selaginella moellendorffii] Length = 1011 Score = 44.3 bits (103), Expect = 0.010, Method: Compositional matrix adjust. Identities = 31/92 (33%), Positives = 46/92 (50%), Gaps = 13/92 (14%) Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 G GLNL GGN LV F W+ +Q R+ + G K+ V++Y +A TI+E Sbjct: 544 GCGLNL-IGGNRLVLFDPDWNPANDKQAAARVW-----RDGQKKRVYIYRFLATGTIEEK 597 Query: 180 VLQRLRTKSTIQDLL-------LNALKKETIH 204 V QR +K +Q ++ +NAL E + Sbjct: 598 VYQRQMSKEGLQKVISGDSKAEVNALSTEDLR 629 >gi|302555175|ref|ZP_07307517.1| helicase [Streptomyces viridochromogenes DSM 40736] gi|302472793|gb|EFL35886.1| helicase [Streptomyces viridochromogenes DSM 40736] Length = 284 Score = 44.3 bits (103), Expect = 0.010, Method: Compositional matrix adjust. Identities = 25/97 (25%), Positives = 45/97 (46%), Gaps = 6/97 (6%) Query: 101 IQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 + + G P+L + G GLNL G++ V F WW+ +E R + G Sbjct: 171 VDRFQAGSTPVLVLSLKAAGTGLNLTRAGHV-VHFDRWWN-----PAVEEQATDRAYRIG 224 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + V V+ LI + T+++ + + L K + D +L + Sbjct: 225 QTQPVQVHRLITEGTVEDRIAEMLEAKRALADAILGS 261 >gi|289620805|emb|CBI52539.1| putative RAD54 protein [Sordaria macrospora] Length = 824 Score = 44.3 bits (103), Expect = 0.010, Method: Compositional matrix adjust. Identities = 27/78 (34%), Positives = 40/78 (51%), Gaps = 6/78 (7%) Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 G GLNL G N LV F W+ QQ + R+ + G K+ FVY IA TI+E Sbjct: 645 GCGLNL-IGANRLVLFDPDWNPAADQQALARVW-----RDGQKKDCFVYRFIATGTIEEK 698 Query: 180 VLQRLRTKSTIQDLLLNA 197 + QR K ++ ++++ Sbjct: 699 IFQRQSHKQSLSSCVVDS 716 >gi|302386693|ref|YP_003822515.1| SNF2-related protein [Clostridium saccharolyticum WM1] gi|302197321|gb|ADL04892.1| SNF2-related protein [Clostridium saccharolyticum WM1] Length = 1047 Score = 44.3 bits (103), Expect = 0.011, Method: Compositional matrix adjust. Identities = 24/96 (25%), Positives = 49/96 (51%), Gaps = 6/96 (6%) Query: 101 IQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 + + + +IPL + G GLNL ++++ F WW++ Q +R + G Sbjct: 938 VNSFKDDEIPLFLISLKAGGTGLNLT-AADVVIHFDPWWNVAAQNQATDR-----AHRIG 991 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 ++ V V+ LI +NTI+E +L+ +K + + ++ Sbjct: 992 QEKQVSVFKLITKNTIEENILKLQESKKDLAEQIIT 1027 >gi|311742706|ref|ZP_07716515.1| SNF2/RAD54 family helicase [Aeromicrobium marinum DSM 15272] gi|311314334|gb|EFQ84242.1| SNF2/RAD54 family helicase [Aeromicrobium marinum DSM 15272] Length = 867 Score = 44.3 bits (103), Expect = 0.011, Method: Composition-based stats. Identities = 23/97 (23%), Positives = 51/97 (52%), Gaps = 6/97 (6%) Query: 101 IQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 +Q+++ G+ P+ + G GLNL ++ + + WW+ +E R + G Sbjct: 756 VQQFSAGEAPVFVLSLKAAGTGLNLTRADHV-IHYDRWWN-----PAVEDQATDRAHRIG 809 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 ++V V+ L+++ TI+E + + + +K + D ++NA Sbjct: 810 QTKSVQVHRLMSEGTIEESIAELIASKRALADAVVNA 846 >gi|89897890|ref|YP_515000.1| SWF/SNF family helicase [Chlamydophila felis Fe/C-56] gi|89331262|dbj|BAE80855.1| swi/snf family helicase 2 [Chlamydophila felis Fe/C-56] Length = 1206 Score = 44.3 bits (103), Expect = 0.011, Method: Compositional matrix adjust. Identities = 21/88 (23%), Positives = 47/88 (53%), Gaps = 6/88 (6%) Query: 118 SCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 + G G+NL GN+++ + WW+ + Q ++R+ + G K VF+Y L+ ++T++ Sbjct: 1090 AAGTGINLT-AGNVVIMYDRWWNPAKENQALDRV-----HRIGQKNTVFIYKLMTEDTLE 1143 Query: 178 ELVLQRLRTKSTIQDLLLNALKKETIHV 205 E + + K + D +++ +H+ Sbjct: 1144 ERIHYLIEKKIRLLDKVISTQDSNILHM 1171 >gi|312794614|ref|YP_004027537.1| SNF2-like protein [Caldicellulosiruptor kristjanssonii 177R1B] gi|312181754|gb|ADQ41924.1| SNF2-related protein [Caldicellulosiruptor kristjanssonii 177R1B] Length = 1108 Score = 44.3 bits (103), Expect = 0.011, Method: Compositional matrix adjust. Identities = 24/94 (25%), Positives = 49/94 (52%), Gaps = 6/94 (6%) Query: 104 WNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKR 163 +N G+ + + G GLNL G ++++ + LWW+ +E + R + G + Sbjct: 1002 FNSGQKQVFLISLKAGGFGLNLT-GADVVILYDLWWN-----PAVENQAMDRAHRIGQEN 1055 Query: 164 AVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 +V V+ LI +NTI+E + + + K + D ++ + Sbjct: 1056 SVQVFRLITKNTIEERIFELQQKKKDLFDSIVQS 1089 >gi|114048179|ref|YP_738729.1| SNF2-like protein [Shewanella sp. MR-7] gi|113889621|gb|ABI43672.1| SNF2-related protein [Shewanella sp. MR-7] Length = 1082 Score = 44.3 bits (103), Expect = 0.011, Method: Compositional matrix adjust. Identities = 27/100 (27%), Positives = 48/100 (48%), Gaps = 6/100 (6%) Query: 101 IQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 I ++ EG P+ + G GLNL + ++ + WW+ +Q +R + G Sbjct: 974 IDKFQEGDTPVFLISLKAGGTGLNLT-AADTVIHYDPWWNPAAEKQATDR-----AHRIG 1027 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKK 200 + VFVY LIA+ T++E + + + K + D +L K Sbjct: 1028 QENPVFVYKLIAEGTVEEKIQEMQQHKQGLADSILEGKGK 1067 >gi|7384851|dbj|BAA93079.1| Rad54 homolog [Neurospora crassa] Length = 834 Score = 44.3 bits (103), Expect = 0.011, Method: Compositional matrix adjust. Identities = 27/78 (34%), Positives = 40/78 (51%), Gaps = 6/78 (7%) Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 G GLNL G N LV F W+ QQ + R+ + G K+ FVY IA TI+E Sbjct: 652 GCGLNL-IGANRLVLFDPDWNPAADQQALARVW-----RDGQKKDCFVYRFIATGTIEEK 705 Query: 180 VLQRLRTKSTIQDLLLNA 197 + QR K ++ ++++ Sbjct: 706 IFQRQSHKQSLSSCVVDS 723 >gi|85092588|ref|XP_959470.1| DNA repair and recombination protein RAD54 [Neurospora crassa OR74A] gi|28920899|gb|EAA30234.1| DNA repair and recombination protein RAD54 [Neurospora crassa OR74A] gi|40804592|emb|CAF05853.1| Rad54 homolog MUS-25 [Neurospora crassa] Length = 831 Score = 44.3 bits (103), Expect = 0.011, Method: Compositional matrix adjust. Identities = 27/78 (34%), Positives = 40/78 (51%), Gaps = 6/78 (7%) Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 G GLNL G N LV F W+ QQ + R+ + G K+ FVY IA TI+E Sbjct: 648 GCGLNL-IGANRLVLFDPDWNPAADQQALARVW-----RDGQKKDCFVYRFIATGTIEEK 701 Query: 180 VLQRLRTKSTIQDLLLNA 197 + QR K ++ ++++ Sbjct: 702 IFQRQSHKQSLSSCVVDS 719 >gi|254384222|ref|ZP_04999566.1| SNF2/RAD54 family helicase [Streptomyces sp. Mg1] gi|194343111|gb|EDX24077.1| SNF2/RAD54 family helicase [Streptomyces sp. Mg1] Length = 936 Score = 44.3 bits (103), Expect = 0.011, Method: Composition-based stats. Identities = 23/97 (23%), Positives = 47/97 (48%), Gaps = 6/97 (6%) Query: 101 IQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 + + G++P+ + G GLNL G++ + F WW+ +E R + G Sbjct: 823 VDRFQAGEVPVFLLSLKAAGTGLNLTRAGHV-IHFDRWWN-----PAVEEQATDRAYRIG 876 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + V V+ +IA+ T+++ + + L K + D +L + Sbjct: 877 QTQPVQVHRIIAEGTVEDRIAEMLEAKRALADAVLGS 913 >gi|113970955|ref|YP_734748.1| SNF2-like protein [Shewanella sp. MR-4] gi|113885639|gb|ABI39691.1| SNF2-related protein [Shewanella sp. MR-4] Length = 1082 Score = 44.3 bits (103), Expect = 0.011, Method: Compositional matrix adjust. Identities = 27/100 (27%), Positives = 48/100 (48%), Gaps = 6/100 (6%) Query: 101 IQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 I ++ EG P+ + G GLNL + ++ + WW+ +Q +R + G Sbjct: 974 IDKFQEGDTPVFLISLKAGGTGLNLT-AADTVIHYDPWWNPAAEKQATDR-----AHRIG 1027 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKK 200 + VFVY LIA+ T++E + + + K + D +L K Sbjct: 1028 QENPVFVYKLIAEGTVEEKIQEMQQHKQGLADSILEGKGK 1067 >gi|329767794|ref|ZP_08259310.1| hypothetical protein HMPREF0428_01007 [Gemella haemolysans M341] gi|328838895|gb|EGF88489.1| hypothetical protein HMPREF0428_01007 [Gemella haemolysans M341] Length = 321 Score = 44.3 bits (103), Expect = 0.011, Method: Compositional matrix adjust. Identities = 34/150 (22%), Positives = 66/150 (44%), Gaps = 9/150 (6%) Query: 51 VHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTL---DKDPCTIQEWNEG 107 +H+E K I + +I+ Y+FN + ++ P+ R + + + + +N Sbjct: 173 IHNENKKEKLKDIINSTEGRLIIFYNFNHEKEAIKSCIPKDRPISYVNGELVDKENYNNA 232 Query: 108 KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFV 167 + + G N+Q N L+F+S E++ Q I+RI + G ++ F Sbjct: 233 DNSITLMQYQAGAKGHNMQ-KANHLIFYSPTEKCEDYMQSIKRI-----HRIGQEKPCFY 286 Query: 168 YYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 Y L+ QN+I+E + + L + L N Sbjct: 287 YKLVVQNSIEEDIYKALERGEDYTNELFNT 316 >gi|253581922|ref|ZP_04859146.1| SWF/SNF family helicase [Fusobacterium varium ATCC 27725] gi|251836271|gb|EES64808.1| SWF/SNF family helicase [Fusobacterium varium ATCC 27725] Length = 926 Score = 44.3 bits (103), Expect = 0.011, Method: Composition-based stats. Identities = 31/106 (29%), Positives = 50/106 (47%), Gaps = 6/106 (5%) Query: 91 GRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 G T D+ + + K + + G GLNL I ++ WW+ + +E Sbjct: 807 GSTKDRQSLVDRFQKDNKYKVFIMTLKTGGVGLNLTAADTIFIY-DPWWN-----KTVEN 860 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + R + G R VF Y LI ++TI+E +LQ TKS + D L++ Sbjct: 861 QAIDRAYRLGQDRTVFSYKLILKDTIEEKILQLQDTKSKLLDNLIS 906 >gi|313851062|ref|NP_001186586.1| putative DNA helicase INO80 complex homolog 1 [Gallus gallus] Length = 1560 Score = 44.3 bits (103), Expect = 0.011, Method: Compositional matrix adjust. Identities = 29/95 (30%), Positives = 46/95 (48%), Gaps = 10/95 (10%) Query: 105 NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQM--IERIGVTRQRQAGFK 162 N I + + G G+NL ++ + S W + Q M R+G T+Q Sbjct: 1169 NRNDIFVFLLSTRAGGLGINLTAADTVIFYDSDWNPTVDQQAMDRAHRLGQTKQ------ 1222 Query: 163 RAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 V VY LI + TI+E +LQR + KS IQ ++++ Sbjct: 1223 --VTVYRLICKGTIEERILQRAKEKSEIQRMVISG 1255 >gi|330797148|ref|XP_003286624.1| hypothetical protein DICPUDRAFT_54372 [Dictyostelium purpureum] gi|325083372|gb|EGC36826.1| hypothetical protein DICPUDRAFT_54372 [Dictyostelium purpureum] Length = 1848 Score = 43.9 bits (102), Expect = 0.012, Method: Composition-based stats. Identities = 31/95 (32%), Positives = 50/95 (52%), Gaps = 9/95 (9%) Query: 110 PLLFAHPAS---CGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVF 166 P +FA S CG G+NL + +VF+ W+ +Q ++R + G +R V Sbjct: 1576 PSIFAFLLSTRACGIGINLT-SADTVVFYDSDWNPTVDEQAMDRC-----HRLGQQRPVT 1629 Query: 167 VYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 VY LI + TI+E +L+R + K IQ +++ K E Sbjct: 1630 VYRLITKGTIEEKILKRAKQKHHIQSIVITGGKFE 1664 >gi|290956330|ref|YP_003487512.1| helicase [Streptomyces scabiei 87.22] gi|260645856|emb|CBG68947.1| putative helicase [Streptomyces scabiei 87.22] Length = 968 Score = 43.9 bits (102), Expect = 0.012, Method: Composition-based stats. Identities = 25/97 (25%), Positives = 46/97 (47%), Gaps = 6/97 (6%) Query: 101 IQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 + + G P+L + G GLNL G++ V F WW+ +E R + G Sbjct: 855 VDRFQSGATPVLVLSLKAAGTGLNLTRAGHV-VHFDRWWN-----PAVEEQATDRAYRIG 908 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + V V+ LI + T+++ + + L +K + D +L + Sbjct: 909 QTQPVQVHRLITEGTVEDRIAEMLESKRALSDAVLGS 945 >gi|189091948|ref|XP_001929807.1| hypothetical protein [Podospora anserina S mat+] gi|27803083|emb|CAD60786.1| unnamed protein product [Podospora anserina] gi|188219327|emb|CAP49307.1| unnamed protein product [Podospora anserina S mat+] Length = 800 Score = 43.9 bits (102), Expect = 0.012, Method: Compositional matrix adjust. Identities = 27/78 (34%), Positives = 40/78 (51%), Gaps = 6/78 (7%) Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 G GLNL G N LV F W+ QQ + R+ + G K+ FVY IA TI+E Sbjct: 638 GCGLNL-IGANRLVLFDPDWNPAADQQALARVW-----RDGQKKDCFVYRFIATGTIEEK 691 Query: 180 VLQRLRTKSTIQDLLLNA 197 + QR K ++ ++++ Sbjct: 692 IFQRQSHKQSLSSCVVDS 709 >gi|117921236|ref|YP_870428.1| SNF2-like protein [Shewanella sp. ANA-3] gi|117613568|gb|ABK49022.1| SNF2-related protein [Shewanella sp. ANA-3] Length = 1082 Score = 43.9 bits (102), Expect = 0.012, Method: Compositional matrix adjust. Identities = 27/100 (27%), Positives = 48/100 (48%), Gaps = 6/100 (6%) Query: 101 IQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 I ++ EG P+ + G GLNL + ++ + WW+ +Q +R + G Sbjct: 974 IDKFQEGDTPVFLISLKAGGTGLNLT-AADTVIHYDPWWNPAAEKQATDR-----AHRIG 1027 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKK 200 + VFVY LIA+ T++E + + + K + D +L K Sbjct: 1028 QENPVFVYKLIAEGTVEEKIQEMQQHKQGLADSILEGKGK 1067 >gi|328474032|gb|EGF44843.1| SNF2 family helicase [Listeria monocytogenes 220] Length = 1038 Score = 43.9 bits (102), Expect = 0.012, Method: Compositional matrix adjust. Identities = 34/127 (26%), Positives = 56/127 (44%), Gaps = 16/127 (12%) Query: 65 KANAAPIIVAYHFNSDLARL-QKAFPQGRTL----DKDPC-----TIQEWNEGKIPLLFA 114 + N I++ F L + QK G+TL K P + +NEG+ + Sbjct: 910 RENGKRILLFSQFTGMLGIIRQKLEEDGQTLFYMDGKTPSKTRLDMVNAFNEGENDIFLI 969 Query: 115 HPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQN 174 + G GLNL G + ++ + LWW+ +E R + G KR V V+ +I + Sbjct: 970 SLKAGGTGLNL-VGADTVILYDLWWN-----PAVEEQATGRAHRIGQKRVVQVFRMITKG 1023 Query: 175 TIDELVL 181 TI+E + Sbjct: 1024 TIEERIF 1030 >gi|323456317|gb|EGB12184.1| hypothetical protein AURANDRAFT_19973 [Aureococcus anophagefferens] Length = 216 Score = 43.9 bits (102), Expect = 0.012, Method: Compositional matrix adjust. Identities = 28/109 (25%), Positives = 49/109 (44%), Gaps = 6/109 (5%) Query: 82 ARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDL 141 ARL + T+ I++++ + F + G G+NL + ++ F + W+ Sbjct: 114 ARLARRLDGDTTVTARQALIEDFSSSDAVVFFLSVRAAGVGINL-HAATRVILFDVSWNP 172 Query: 142 EEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 + Q I R + G +R VFVY L+A T++E V R K + Sbjct: 173 ADDAQAI-----ARAHRFGQERPVFVYRLVAAGTVEERVFNRQIAKGAV 216 >gi|55963369|emb|CAI11899.1| novel protein containing an SNF2 family N-terminal domain and a Helicase conserved C-terminal domain [Danio rerio] Length = 1582 Score = 43.9 bits (102), Expect = 0.012, Method: Compositional matrix adjust. Identities = 27/80 (33%), Positives = 42/80 (52%), Gaps = 10/80 (12%) Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQM--IERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 G G+NL ++ + S W + Q M R+G T+Q V VY LI + TI+ Sbjct: 1211 GLGINLTAADTVIFYDSDWNPTVDQQAMDRAHRLGQTKQ--------VTVYRLICKGTIE 1262 Query: 178 ELVLQRLRTKSTIQDLLLNA 197 E +LQR + KS IQ ++++ Sbjct: 1263 ERILQRAKEKSEIQRMVISG 1282 >gi|329943269|ref|ZP_08292043.1| helicase conserved C-terminal domain protein [Chlamydophila psittaci Cal10] gi|313848419|emb|CBY17423.1| putative DNA helicase-related protein [Chlamydophila psittaci RD1] gi|325506669|gb|ADZ18307.1| putative DNA helicase [Chlamydophila psittaci 6BC] gi|328814816|gb|EGF84806.1| helicase conserved C-terminal domain protein [Chlamydophila psittaci Cal10] gi|328915108|gb|AEB55941.1| helicase, Snf2/Rad54 family [Chlamydophila psittaci 6BC] Length = 1205 Score = 43.9 bits (102), Expect = 0.012, Method: Compositional matrix adjust. Identities = 21/88 (23%), Positives = 47/88 (53%), Gaps = 6/88 (6%) Query: 118 SCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 + G G+NL GN+++ + WW+ + Q ++R+ + G K VF+Y L+ ++T++ Sbjct: 1090 AAGTGINLT-AGNVVIMYDRWWNPAKENQALDRV-----HRIGQKNTVFIYKLMTEDTLE 1143 Query: 178 ELVLQRLRTKSTIQDLLLNALKKETIHV 205 E + + K + D +++ +H+ Sbjct: 1144 ERIHYLIEKKIRLLDKVISTQDSNILHM 1171 >gi|297696366|ref|XP_002825369.1| PREDICTED: LOW QUALITY PROTEIN: putative DNA helicase INO80 complex homolog 1-like [Pongo abelii] Length = 1537 Score = 43.9 bits (102), Expect = 0.012, Method: Compositional matrix adjust. Identities = 29/95 (30%), Positives = 46/95 (48%), Gaps = 10/95 (10%) Query: 105 NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQM--IERIGVTRQRQAGFK 162 N I + + G G+NL ++ + S W + Q M R+G T+Q Sbjct: 1146 NRNDIFVFLLSTRAGGLGINLTAADTVIFYDSDWNPTVDQQAMDRAHRLGQTKQ------ 1199 Query: 163 RAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 V VY LI + TI+E +LQR + KS IQ ++++ Sbjct: 1200 --VTVYRLICKGTIEERILQRAKEKSEIQRMVISG 1232 >gi|310795007|gb|EFQ30468.1| SNF2 family domain-containing protein [Glomerella graminicola M1.001] Length = 852 Score = 43.9 bits (102), Expect = 0.012, Method: Compositional matrix adjust. Identities = 27/78 (34%), Positives = 40/78 (51%), Gaps = 6/78 (7%) Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 G GLNL G N LV F W+ QQ + R+ + G K+ FVY IA TI+E Sbjct: 690 GCGLNL-IGANRLVLFDPDWNPAADQQALARVW-----RDGQKKDCFVYRFIATGTIEEK 743 Query: 180 VLQRLRTKSTIQDLLLNA 197 + QR K ++ ++++ Sbjct: 744 IFQRQSHKQSLSSCVVDS 761 >gi|113676533|ref|NP_001038584.1| INO80 complex homolog 1 [Danio rerio] gi|56207300|emb|CAI20655.1| novel protein similar to H.sapiens INOC1, INO80 complex homolog 1 (S. cerevisiae) (INOC1) [Danio rerio] Length = 1552 Score = 43.9 bits (102), Expect = 0.012, Method: Compositional matrix adjust. Identities = 27/80 (33%), Positives = 42/80 (52%), Gaps = 10/80 (12%) Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQM--IERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 G G+NL ++ + S W + Q M R+G T+Q V VY LI + TI+ Sbjct: 1178 GLGINLTAADTVIFYDSDWNPTVDQQAMDRAHRLGQTKQ--------VTVYRLICKGTIE 1229 Query: 178 ELVLQRLRTKSTIQDLLLNA 197 E +LQR + KS IQ ++++ Sbjct: 1230 ERILQRAKEKSEIQRMVISG 1249 >gi|6330933|dbj|BAA86573.1| KIAA1259 protein [Homo sapiens] Length = 1561 Score = 43.9 bits (102), Expect = 0.012, Method: Compositional matrix adjust. Identities = 29/95 (30%), Positives = 46/95 (48%), Gaps = 10/95 (10%) Query: 105 NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQM--IERIGVTRQRQAGFK 162 N I + + G G+NL ++ + S W + Q M R+G T+Q Sbjct: 1170 NRNDIFVFLLSTRAGGLGINLTAADTVIFYDSDWNPTVDQQAMDRAHRLGQTKQ------ 1223 Query: 163 RAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 V VY LI + TI+E +LQR + KS IQ ++++ Sbjct: 1224 --VTVYRLICKGTIEERILQRAKEKSEIQRMVISG 1256 >gi|291403204|ref|XP_002718017.1| PREDICTED: INO80 complex homolog 1 [Oryctolagus cuniculus] Length = 1559 Score = 43.9 bits (102), Expect = 0.012, Method: Compositional matrix adjust. Identities = 29/95 (30%), Positives = 46/95 (48%), Gaps = 10/95 (10%) Query: 105 NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQM--IERIGVTRQRQAGFK 162 N I + + G G+NL ++ + S W + Q M R+G T+Q Sbjct: 1168 NRNDIFVFLLSTRAGGLGINLTAADTVIFYDSDWNPTVDQQAMDRAHRLGQTKQ------ 1221 Query: 163 RAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 V VY LI + TI+E +LQR + KS IQ ++++ Sbjct: 1222 --VTVYRLICKGTIEERILQRAKEKSEIQRMVISG 1254 >gi|114656423|ref|XP_510320.2| PREDICTED: INO80 complex homolog 1 [Pan troglodytes] Length = 1556 Score = 43.9 bits (102), Expect = 0.012, Method: Compositional matrix adjust. Identities = 29/95 (30%), Positives = 46/95 (48%), Gaps = 10/95 (10%) Query: 105 NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQM--IERIGVTRQRQAGFK 162 N I + + G G+NL ++ + S W + Q M R+G T+Q Sbjct: 1165 NRNDIFVFLLSTRAGGLGINLTAADTVIFYDSDWNPTVDQQAMDRAHRLGQTKQ------ 1218 Query: 163 RAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 V VY LI + TI+E +LQR + KS IQ ++++ Sbjct: 1219 --VTVYRLICKGTIEERILQRAKEKSEIQRMVISG 1251 >gi|38708321|ref|NP_060023.1| putative DNA helicase INO80 complex homolog 1 [Homo sapiens] gi|114149322|sp|Q9ULG1|INO80_HUMAN RecName: Full=Putative DNA helicase INO80 complex homolog 1; Short=hINO80 gi|119612875|gb|EAW92469.1| INO80 complex homolog 1 (S. cerevisiae), isoform CRA_b [Homo sapiens] gi|119612876|gb|EAW92470.1| INO80 complex homolog 1 (S. cerevisiae), isoform CRA_b [Homo sapiens] gi|148921591|gb|AAI46786.1| INO80 protein [Homo sapiens] gi|168269776|dbj|BAG10015.1| DNA helicase INO80 complex homolog 1 [synthetic construct] Length = 1556 Score = 43.9 bits (102), Expect = 0.012, Method: Compositional matrix adjust. Identities = 29/95 (30%), Positives = 46/95 (48%), Gaps = 10/95 (10%) Query: 105 NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQM--IERIGVTRQRQAGFK 162 N I + + G G+NL ++ + S W + Q M R+G T+Q Sbjct: 1165 NRNDIFVFLLSTRAGGLGINLTAADTVIFYDSDWNPTVDQQAMDRAHRLGQTKQ------ 1218 Query: 163 RAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 V VY LI + TI+E +LQR + KS IQ ++++ Sbjct: 1219 --VTVYRLICKGTIEERILQRAKEKSEIQRMVISG 1251 >gi|317063195|ref|ZP_07927680.1| SWF/SNF family helicase [Fusobacterium ulcerans ATCC 49185] gi|313688871|gb|EFS25706.1| SWF/SNF family helicase [Fusobacterium ulcerans ATCC 49185] Length = 926 Score = 43.9 bits (102), Expect = 0.013, Method: Composition-based stats. Identities = 31/106 (29%), Positives = 50/106 (47%), Gaps = 6/106 (5%) Query: 91 GRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 G T D+ + + K + + G GLNL I ++ WW+ + +E Sbjct: 807 GSTKDRQSLVDRFQKDNKYKVFIMTLKTGGVGLNLTAADTIFIY-DPWWN-----KTVEN 860 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + R + G R VF Y LI ++TI+E +LQ TKS + D L++ Sbjct: 861 QAIDRAYRLGQDRTVFSYKLILKDTIEEKILQLQDTKSKLLDNLIS 906 >gi|257468947|ref|ZP_05633041.1| SWF/SNF family helicase [Fusobacterium ulcerans ATCC 49185] Length = 915 Score = 43.9 bits (102), Expect = 0.013, Method: Composition-based stats. Identities = 31/106 (29%), Positives = 50/106 (47%), Gaps = 6/106 (5%) Query: 91 GRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 G T D+ + + K + + G GLNL I ++ WW+ + +E Sbjct: 796 GSTKDRQSLVDRFQKDNKYKVFIMTLKTGGVGLNLTAADTIFIY-DPWWN-----KTVEN 849 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + R + G R VF Y LI ++TI+E +LQ TKS + D L++ Sbjct: 850 QAIDRAYRLGQDRTVFSYKLILKDTIEEKILQLQDTKSKLLDNLIS 895 >gi|149692054|ref|XP_001503533.1| PREDICTED: INO80 complex homolog 1 (S. cerevisiae) [Equus caballus] Length = 1561 Score = 43.9 bits (102), Expect = 0.013, Method: Compositional matrix adjust. Identities = 29/95 (30%), Positives = 46/95 (48%), Gaps = 10/95 (10%) Query: 105 NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQM--IERIGVTRQRQAGFK 162 N I + + G G+NL ++ + S W + Q M R+G T+Q Sbjct: 1170 NRNDIFVFLLSTRAGGLGINLTAADTVIFYDSDWNPTVDQQAMDRAHRLGQTKQ------ 1223 Query: 163 RAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 V VY LI + TI+E +LQR + KS IQ ++++ Sbjct: 1224 --VTVYRLICKGTIEERILQRAKEKSEIQRMVISG 1256 >gi|52082146|ref|YP_080937.1| putative helicase YwqA [Bacillus licheniformis ATCC 14580] gi|52787537|ref|YP_093366.1| YwqA [Bacillus licheniformis ATCC 14580] gi|319648023|ref|ZP_08002240.1| YwqA protein [Bacillus sp. BT1B_CT2] gi|52005357|gb|AAU25299.1| putative helicase YwqA [Bacillus licheniformis ATCC 14580] gi|52350039|gb|AAU42673.1| YwqA [Bacillus licheniformis ATCC 14580] gi|317389658|gb|EFV70468.1| YwqA protein [Bacillus sp. BT1B_CT2] Length = 921 Score = 43.9 bits (102), Expect = 0.013, Method: Compositional matrix adjust. Identities = 34/139 (24%), Positives = 66/139 (47%), Gaps = 20/139 (14%) Query: 59 LEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPAS 118 ++ ++EK+ P+ N L++L++ DK ++++ + P+L + Sbjct: 778 MKRLLEKSFGEPV---KFLNGSLSKLER--------DK---MVEQFQNKEFPILILSLKA 823 Query: 119 CGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDE 178 G GLNL N ++ + WW+ +E R + G KR V V+ LI TI+E Sbjct: 824 GGTGLNLTA-ANHVIHYDRWWN-----PAVENQATDRAYRIGQKRFVHVHKLITTGTIEE 877 Query: 179 LVLQRLRTKSTIQDLLLNA 197 + Q L +K ++ D ++ + Sbjct: 878 KIDQMLESKQSLNDQIIQS 896 >gi|119612877|gb|EAW92471.1| INO80 complex homolog 1 (S. cerevisiae), isoform CRA_c [Homo sapiens] Length = 1616 Score = 43.9 bits (102), Expect = 0.013, Method: Compositional matrix adjust. Identities = 29/95 (30%), Positives = 46/95 (48%), Gaps = 10/95 (10%) Query: 105 NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQM--IERIGVTRQRQAGFK 162 N I + + G G+NL ++ + S W + Q M R+G T+Q Sbjct: 1196 NRNDIFVFLLSTRAGGLGINLTAADTVIFYDSDWNPTVDQQAMDRAHRLGQTKQ------ 1249 Query: 163 RAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 V VY LI + TI+E +LQR + KS IQ ++++ Sbjct: 1250 --VTVYRLICKGTIEERILQRAKEKSEIQRMVISG 1282 >gi|62185500|ref|YP_220285.1| putative DNA helicase-related protein [Chlamydophila abortus S26/3] gi|62148567|emb|CAH64339.1| putative DNA helicase-related protein [Chlamydophila abortus S26/3] Length = 1206 Score = 43.9 bits (102), Expect = 0.013, Method: Compositional matrix adjust. Identities = 21/88 (23%), Positives = 47/88 (53%), Gaps = 6/88 (6%) Query: 118 SCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 + G G+NL GN+++ + WW+ + Q ++R+ + G K VF+Y L+ ++T++ Sbjct: 1090 AAGTGINLT-AGNVVIMYDRWWNPAKENQALDRV-----HRIGQKNTVFIYKLMTEDTLE 1143 Query: 178 ELVLQRLRTKSTIQDLLLNALKKETIHV 205 E + + K + D +++ +H+ Sbjct: 1144 ERIHYLIEKKIRLLDKVISTQDSNILHM 1171 >gi|308176367|ref|YP_003915773.1| putative ATP-dependent helicase [Arthrobacter arilaitensis Re117] gi|307743830|emb|CBT74802.1| putative ATP-dependent helicase [Arthrobacter arilaitensis Re117] Length = 1115 Score = 43.9 bits (102), Expect = 0.013, Method: Compositional matrix adjust. Identities = 33/99 (33%), Positives = 47/99 (47%), Gaps = 16/99 (16%) Query: 101 IQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER---IGVTRQR 157 I+++ EG+ PL + G GLNL + WW+ Q I+R IG TRQ Sbjct: 1007 IEQFKEGEAPLFLISLKAGGFGLNLTEA-DYCFLLDPWWNPAVEAQAIDRTHRIGQTRQ- 1064 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTK----STIQD 192 V VY +I+Q TI+E V+ +K ST+ D Sbjct: 1065 -------VMVYRMISQGTIEEKVVALQESKRKLISTVMD 1096 >gi|73999785|ref|XP_535436.2| PREDICTED: similar to yeast INO80-like protein isoform 1 [Canis familiaris] Length = 1519 Score = 43.9 bits (102), Expect = 0.013, Method: Compositional matrix adjust. Identities = 29/95 (30%), Positives = 46/95 (48%), Gaps = 10/95 (10%) Query: 105 NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQM--IERIGVTRQRQAGFK 162 N I + + G G+NL ++ + S W + Q M R+G T+Q Sbjct: 1128 NRNDIFVFLLSTRAGGLGINLTAADTVIFYDSDWNPTVDQQAMDRAHRLGQTKQ------ 1181 Query: 163 RAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 V VY LI + TI+E +LQR + KS IQ ++++ Sbjct: 1182 --VTVYRLICKGTIEERILQRAKEKSEIQRMVISG 1214 >gi|329904224|ref|ZP_08273705.1| DNA helicase, SNF2/RAD54 family [Oxalobacteraceae bacterium IMCC9480] gi|327548098|gb|EGF32821.1| DNA helicase, SNF2/RAD54 family [Oxalobacteraceae bacterium IMCC9480] Length = 1101 Score = 43.9 bits (102), Expect = 0.013, Method: Composition-based stats. Identities = 27/106 (25%), Positives = 52/106 (49%), Gaps = 7/106 (6%) Query: 91 GRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 G T D+ ++ + EG++PL + G GLNL + ++ + WW+ Q + Sbjct: 977 GDTTDR-ATPVRRFQEGEVPLFLISLKAGGVGLNLT-AADTVIHYDPWWNPAAENQATD- 1033 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 R + G ++ VFVY LI +I+E ++ K+ + + +L+ Sbjct: 1034 ----RAHRLGQEKPVFVYKLIVAGSIEEKIVALQDKKAALAEGILS 1075 >gi|327259622|ref|XP_003214635.1| PREDICTED: putative DNA helicase INO80 complex homolog 1-like [Anolis carolinensis] Length = 1421 Score = 43.9 bits (102), Expect = 0.013, Method: Compositional matrix adjust. Identities = 29/95 (30%), Positives = 46/95 (48%), Gaps = 10/95 (10%) Query: 105 NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQM--IERIGVTRQRQAGFK 162 N I + + G G+NL ++ + S W + Q M R+G T+Q Sbjct: 1169 NRNDIFVFLLSTRAGGLGINLTAADTVIFYDSDWNPTVDQQAMDRAHRLGQTKQ------ 1222 Query: 163 RAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 V VY LI + TI+E +LQR + KS IQ ++++ Sbjct: 1223 --VTVYRLICKGTIEERILQRAKEKSEIQRMVISG 1255 >gi|114562478|ref|YP_749991.1| SNF2-related protein [Shewanella frigidimarina NCIMB 400] gi|114333771|gb|ABI71153.1| SNF2-related protein [Shewanella frigidimarina NCIMB 400] Length = 1070 Score = 43.9 bits (102), Expect = 0.013, Method: Compositional matrix adjust. Identities = 34/119 (28%), Positives = 56/119 (47%), Gaps = 9/119 (7%) Query: 80 DLARLQKAFPQ--GRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSL 137 +L RL ++ + G+T D+ I + EG + + G GLNL + ++ F Sbjct: 940 ELKRLTISYSKLTGQTRDRQ-TQIDAFQEGDNSVFLISLKAGGTGLNLT-AADTVIHFDP 997 Query: 138 WWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 WW+ ER R + G VFVY LIAQ T++E + + + K + D +L+ Sbjct: 998 WWN-----PAAERQATDRAHRIGQLNPVFVYKLIAQGTVEEKIQEMQQHKQGLADSILS 1051 >gi|301754870|ref|XP_002913258.1| PREDICTED: putative DNA helicase INO80 complex homolog 1-like [Ailuropoda melanoleuca] gi|281338216|gb|EFB13800.1| hypothetical protein PANDA_001057 [Ailuropoda melanoleuca] Length = 1561 Score = 43.9 bits (102), Expect = 0.013, Method: Compositional matrix adjust. Identities = 29/95 (30%), Positives = 46/95 (48%), Gaps = 10/95 (10%) Query: 105 NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQM--IERIGVTRQRQAGFK 162 N I + + G G+NL ++ + S W + Q M R+G T+Q Sbjct: 1170 NRNDIFVFLLSTRAGGLGINLTAADTVIFYDSDWNPTVDQQAMDRAHRLGQTKQ------ 1223 Query: 163 RAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 V VY LI + TI+E +LQR + KS IQ ++++ Sbjct: 1224 --VTVYRLICKGTIEERILQRAKEKSEIQRMVISG 1256 >gi|326920472|ref|XP_003206496.1| PREDICTED: putative DNA helicase INO80 complex homolog 1-like [Meleagris gallopavo] Length = 1545 Score = 43.9 bits (102), Expect = 0.013, Method: Compositional matrix adjust. Identities = 29/95 (30%), Positives = 46/95 (48%), Gaps = 10/95 (10%) Query: 105 NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQM--IERIGVTRQRQAGFK 162 N I + + G G+NL ++ + S W + Q M R+G T+Q Sbjct: 1168 NRNDIFVFLLSTRAGGLGINLTAADTVIFYDSDWNPTVDQQAMDRAHRLGQTKQ------ 1221 Query: 163 RAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 V VY LI + TI+E +LQR + KS IQ ++++ Sbjct: 1222 --VTVYRLICKGTIEERILQRAKEKSEIQRMVISG 1254 >gi|297296191|ref|XP_002804786.1| PREDICTED: putative DNA helicase INO80 complex homolog 1-like [Macaca mulatta] Length = 1478 Score = 43.9 bits (102), Expect = 0.013, Method: Compositional matrix adjust. Identities = 29/95 (30%), Positives = 46/95 (48%), Gaps = 10/95 (10%) Query: 105 NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQM--IERIGVTRQRQAGFK 162 N I + + G G+NL ++ + S W + Q M R+G T+Q Sbjct: 1087 NRNDIFVFLLSTRAGGLGINLTAADTVIFYDSDWNPTVDQQAMDRAHRLGQTKQ------ 1140 Query: 163 RAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 V VY LI + TI+E +LQR + KS IQ ++++ Sbjct: 1141 --VTVYRLICKGTIEERILQRAKEKSEIQRMVISG 1173 >gi|73999781|ref|XP_849183.1| PREDICTED: similar to yeast INO80-like protein isoform 3 [Canis familiaris] Length = 1560 Score = 43.9 bits (102), Expect = 0.013, Method: Compositional matrix adjust. Identities = 29/95 (30%), Positives = 46/95 (48%), Gaps = 10/95 (10%) Query: 105 NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQM--IERIGVTRQRQAGFK 162 N I + + G G+NL ++ + S W + Q M R+G T+Q Sbjct: 1169 NRNDIFVFLLSTRAGGLGINLTAADTVIFYDSDWNPTVDQQAMDRAHRLGQTKQ------ 1222 Query: 163 RAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 V VY LI + TI+E +LQR + KS IQ ++++ Sbjct: 1223 --VTVYRLICKGTIEERILQRAKEKSEIQRMVISG 1255 >gi|156039515|ref|XP_001586865.1| hypothetical protein SS1G_11894 [Sclerotinia sclerotiorum 1980] gi|154697631|gb|EDN97369.1| hypothetical protein SS1G_11894 [Sclerotinia sclerotiorum 1980 UF-70] Length = 861 Score = 43.9 bits (102), Expect = 0.013, Method: Compositional matrix adjust. Identities = 27/78 (34%), Positives = 40/78 (51%), Gaps = 6/78 (7%) Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 G GLNL G N LV F W+ QQ + R+ + G K+ FVY IA TI+E Sbjct: 699 GCGLNL-IGANRLVLFDPDWNPAADQQALARVW-----RDGQKKDCFVYRFIATGTIEEK 752 Query: 180 VLQRLRTKSTIQDLLLNA 197 + QR K ++ ++++ Sbjct: 753 IFQRQSHKQSLSSCVVDS 770 >gi|296214144|ref|XP_002753574.1| PREDICTED: putative DNA helicase INO80 complex homolog 1 [Callithrix jacchus] Length = 1556 Score = 43.9 bits (102), Expect = 0.013, Method: Compositional matrix adjust. Identities = 29/95 (30%), Positives = 46/95 (48%), Gaps = 10/95 (10%) Query: 105 NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQM--IERIGVTRQRQAGFK 162 N I + + G G+NL ++ + S W + Q M R+G T+Q Sbjct: 1166 NRNDIFVFLLSTRAGGLGINLTAADTVIFYDSDWNPTVDQQAMDRAHRLGQTKQ------ 1219 Query: 163 RAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 V VY LI + TI+E +LQR + KS IQ ++++ Sbjct: 1220 --VTVYRLICKGTIEERILQRAKEKSEIQRMVISG 1252 >gi|119612874|gb|EAW92468.1| INO80 complex homolog 1 (S. cerevisiae), isoform CRA_a [Homo sapiens] Length = 1313 Score = 43.9 bits (102), Expect = 0.013, Method: Compositional matrix adjust. Identities = 29/95 (30%), Positives = 46/95 (48%), Gaps = 10/95 (10%) Query: 105 NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQM--IERIGVTRQRQAGFK 162 N I + + G G+NL ++ + S W + Q M R+G T+Q Sbjct: 893 NRNDIFVFLLSTRAGGLGINLTAADTVIFYDSDWNPTVDQQAMDRAHRLGQTKQ------ 946 Query: 163 RAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 V VY LI + TI+E +LQR + KS IQ ++++ Sbjct: 947 --VTVYRLICKGTIEERILQRAKEKSEIQRMVISG 979 >gi|73999783|ref|XP_858164.1| PREDICTED: similar to yeast INO80-like protein isoform 4 [Canis familiaris] Length = 1584 Score = 43.9 bits (102), Expect = 0.013, Method: Compositional matrix adjust. Identities = 29/95 (30%), Positives = 46/95 (48%), Gaps = 10/95 (10%) Query: 105 NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQM--IERIGVTRQRQAGFK 162 N I + + G G+NL ++ + S W + Q M R+G T+Q Sbjct: 1193 NRNDIFVFLLSTRAGGLGINLTAADTVIFYDSDWNPTVDQQAMDRAHRLGQTKQ------ 1246 Query: 163 RAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 V VY LI + TI+E +LQR + KS IQ ++++ Sbjct: 1247 --VTVYRLICKGTIEERILQRAKEKSEIQRMVISG 1279 >gi|150388431|ref|YP_001318480.1| non-specific serine/threonine protein kinase [Alkaliphilus metalliredigens QYMF] gi|149948293|gb|ABR46821.1| Non-specific serine/threonine protein kinase [Alkaliphilus metalliredigens QYMF] Length = 1141 Score = 43.9 bits (102), Expect = 0.014, Method: Compositional matrix adjust. Identities = 26/82 (31%), Positives = 40/82 (48%), Gaps = 6/82 (7%) Query: 101 IQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 ++E+NEGK + + G GLNL G + ++ F WW+ +E R + G Sbjct: 1033 VKEFNEGKGSIFLISLKAGGTGLNLT-GADTVIHFDPWWN-----PAVEDQATDRAYRIG 1086 Query: 161 FKRAVFVYYLIAQNTIDELVLQ 182 K V V IAQ TI+E + + Sbjct: 1087 QKNKVHVMKFIAQGTIEEKIFK 1108 >gi|296414511|ref|XP_002836943.1| hypothetical protein [Tuber melanosporum Mel28] gi|295632788|emb|CAZ81134.1| unnamed protein product [Tuber melanosporum] Length = 1444 Score = 43.9 bits (102), Expect = 0.014, Method: Compositional matrix adjust. Identities = 25/79 (31%), Positives = 43/79 (54%), Gaps = 6/79 (7%) Query: 118 SCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 + G G+NL +++F S W + Q M R + G K V VY L++++TI+ Sbjct: 816 AGGLGINLMTADTVILFDSDWNPQADLQAM------ARAHRIGQKAHVMVYRLVSKDTIE 869 Query: 178 ELVLQRLRTKSTIQDLLLN 196 E VL+R R K ++ L+++ Sbjct: 870 EEVLERARNKMILEHLVIS 888 >gi|71279360|ref|YP_270079.1| Snf2 family protein [Colwellia psychrerythraea 34H] gi|71145100|gb|AAZ25573.1| Snf2 family protein [Colwellia psychrerythraea 34H] Length = 1134 Score = 43.9 bits (102), Expect = 0.014, Method: Compositional matrix adjust. Identities = 25/96 (26%), Positives = 48/96 (50%), Gaps = 6/96 (6%) Query: 101 IQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 + ++ G++P+ + G GLNL + ++ F WW+ +E R + G Sbjct: 1022 VDKFQRGEVPVFLISLRAGGVGLNLT-AADTVIHFDPWWN-----PAVENQATDRAYRIG 1075 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + VFVY LI +N+I+E + + + K+ + LL+ Sbjct: 1076 QNKPVFVYKLIIENSIEEKIQKIQQNKAELAKALLS 1111 >gi|311244967|ref|XP_003121636.1| PREDICTED: putative DNA helicase INO80 complex homolog 1-like [Sus scrofa] Length = 1566 Score = 43.9 bits (102), Expect = 0.014, Method: Compositional matrix adjust. Identities = 29/95 (30%), Positives = 46/95 (48%), Gaps = 10/95 (10%) Query: 105 NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQM--IERIGVTRQRQAGFK 162 N I + + G G+NL ++ + S W + Q M R+G T+Q Sbjct: 1175 NRNDIFVFLLSTRAGGLGINLTAADTVIFYDSDWNPTVDQQAMDRAHRLGQTKQ------ 1228 Query: 163 RAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 V VY LI + TI+E +LQR + KS IQ ++++ Sbjct: 1229 --VTVYRLICKGTIEERILQRAKEKSEIQRMVISG 1261 >gi|158261765|dbj|BAF83060.1| unnamed protein product [Homo sapiens] Length = 1307 Score = 43.9 bits (102), Expect = 0.014, Method: Compositional matrix adjust. Identities = 29/95 (30%), Positives = 46/95 (48%), Gaps = 10/95 (10%) Query: 105 NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQM--IERIGVTRQRQAGFK 162 N I + + G G+NL ++ + S W + Q M R+G T+Q Sbjct: 1165 NRNDIFVFLLSTRAGGLGINLTAADTVIFYDSDWNPTVDQQAMDRAHRLGQTKQ------ 1218 Query: 163 RAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 V VY LI + TI+E +LQR + KS IQ ++++ Sbjct: 1219 --VTVYRLICKGTIEERILQRAKEKSEIQRMVISG 1251 >gi|317153779|ref|YP_004121827.1| SNF2-like protein [Desulfovibrio aespoeensis Aspo-2] gi|316944030|gb|ADU63081.1| SNF2-related protein [Desulfovibrio aespoeensis Aspo-2] Length = 1069 Score = 43.9 bits (102), Expect = 0.014, Method: Compositional matrix adjust. Identities = 28/97 (28%), Positives = 47/97 (48%), Gaps = 9/97 (9%) Query: 109 IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVY 168 IP+ + G GLNL + ++ + WW+ +E R + G KR VF Y Sbjct: 969 IPIFLISLKAGGTGLNLT-SADYVIHYDPWWN-----PAVENQATDRTHRIGQKRQVFAY 1022 Query: 169 YLIAQNTIDELVLQRLRTKSTIQDLLL---NALKKET 202 +I QNT++E +L+ K + + ++ +ALK T Sbjct: 1023 KMICQNTVEERILKLQEQKKDVAESIIPGQSALKGLT 1059 >gi|319425773|gb|ADV53847.1| SNF2-related protein [Shewanella putrefaciens 200] Length = 1073 Score = 43.9 bits (102), Expect = 0.014, Method: Compositional matrix adjust. Identities = 26/100 (26%), Positives = 47/100 (47%), Gaps = 6/100 (6%) Query: 101 IQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 I + +G P+ + G GLNL + ++ + WW+ +Q +R + G Sbjct: 965 IDRFQDGDTPVFLISLKAGGTGLNLT-AADTVIHYDPWWNPAAEKQATDR-----AHRIG 1018 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKK 200 + VFVY LIA+ T++E + + + K + D +L K Sbjct: 1019 QDKPVFVYKLIAEGTVEEKIQEMQQHKQNLADSILEGKGK 1058 >gi|62234443|ref|NP_080850.2| putative DNA helicase INO80 complex homolog 1 [Mus musculus] gi|114149323|sp|Q6ZPV2|INO80_MOUSE RecName: Full=Putative DNA helicase INO80 complex homolog 1 gi|123232376|emb|CAM22022.1| INO80 homolog (S. cerevisiae) [Mus musculus] gi|123236330|emb|CAM25341.1| INO80 homolog (S. cerevisiae) [Mus musculus] Length = 1559 Score = 43.9 bits (102), Expect = 0.014, Method: Compositional matrix adjust. Identities = 27/80 (33%), Positives = 42/80 (52%), Gaps = 10/80 (12%) Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQM--IERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 G G+NL ++ + S W + Q M R+G T+Q V VY LI + TI+ Sbjct: 1183 GLGINLTAADTVIFYDSDWNPTVDQQAMDRAHRLGQTKQ--------VTVYRLICKGTIE 1234 Query: 178 ELVLQRLRTKSTIQDLLLNA 197 E +LQR + KS IQ ++++ Sbjct: 1235 ERILQRAKEKSEIQRMVISG 1254 >gi|255507152|ref|ZP_05382791.1| SWI/SNF family helicase [Chlamydia trachomatis D(s)2923] Length = 1199 Score = 43.9 bits (102), Expect = 0.015, Method: Compositional matrix adjust. Identities = 25/94 (26%), Positives = 51/94 (54%), Gaps = 14/94 (14%) Query: 118 SCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 + G G+NL GN+++ + WW+ + Q ++R+ + G K VF+Y L+ ++T++ Sbjct: 1089 AAGTGINLT-AGNVVIMYDRWWNPAKENQALDRV-----HRIGQKNTVFIYKLVTEDTLE 1142 Query: 178 ELV-------LQRLRTKSTIQDL-LLNALKKETI 203 E + ++ L +T QD +L+ L +E + Sbjct: 1143 EHIHYLIEKKMRLLNQVTTTQDSNILHVLNREDL 1176 >gi|323359978|ref|YP_004226374.1| superfamily II DNA/RNA helicase, SNF2 family [Microbacterium testaceum StLB037] gi|323276349|dbj|BAJ76494.1| superfamily II DNA/RNA helicase, SNF2 family [Microbacterium testaceum StLB037] Length = 983 Score = 43.9 bits (102), Expect = 0.015, Method: Composition-based stats. Identities = 34/117 (29%), Positives = 52/117 (44%), Gaps = 7/117 (5%) Query: 80 DLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWW 139 D A L A G T + + + G+ P+ + G GL L + V WW Sbjct: 854 DAAGLAYAHLDGSTARRGD-VVAGFRAGEAPVFLISLKAGGFGLTLTEADYVFVL-DPWW 911 Query: 140 DLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + Q I+R + G ++VFVY LIA TI+E VL R K+ + D +++ Sbjct: 912 NPAAEAQAIDR-----AHRIGQDKSVFVYRLIAAGTIEEKVLALQRRKAALFDAVID 963 >gi|293358005|ref|XP_230473.5| PREDICTED: yeast INO80-like protein [Rattus norvegicus] Length = 1559 Score = 43.9 bits (102), Expect = 0.015, Method: Compositional matrix adjust. Identities = 27/80 (33%), Positives = 42/80 (52%), Gaps = 10/80 (12%) Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQM--IERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 G G+NL ++ + S W + Q M R+G T+Q V VY LI + TI+ Sbjct: 1183 GLGINLTAADTVIFYDSDWNPTVDQQAMDRAHRLGQTKQ--------VTVYRLICKGTIE 1234 Query: 178 ELVLQRLRTKSTIQDLLLNA 197 E +LQR + KS IQ ++++ Sbjct: 1235 ERILQRAKEKSEIQRMVISG 1254 >gi|15836368|ref|NP_300892.1| SWI/SNF family helicase_1 [Chlamydophila pneumoniae J138] gi|8979209|dbj|BAA99043.1| SWI/SNF family helicase_1 [Chlamydophila pneumoniae J138] Length = 1215 Score = 43.9 bits (102), Expect = 0.015, Method: Compositional matrix adjust. Identities = 22/88 (25%), Positives = 47/88 (53%), Gaps = 6/88 (6%) Query: 118 SCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 + G G+NL GN+++ + WW+ + Q ++R+ + G K VF+Y LI ++T++ Sbjct: 1092 AAGTGINLT-AGNVVIMYDRWWNPAKEIQALDRV-----HRIGQKNTVFIYKLITEDTLE 1145 Query: 178 ELVLQRLRTKSTIQDLLLNALKKETIHV 205 E + + K + D ++ + +H+ Sbjct: 1146 ERIHYLIEKKIRLLDKVIASQDSNILHM 1173 >gi|120599532|ref|YP_964106.1| SNF2-like protein [Shewanella sp. W3-18-1] gi|120559625|gb|ABM25552.1| SNF2-related protein [Shewanella sp. W3-18-1] Length = 1073 Score = 43.9 bits (102), Expect = 0.015, Method: Compositional matrix adjust. Identities = 26/100 (26%), Positives = 47/100 (47%), Gaps = 6/100 (6%) Query: 101 IQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 I + +G P+ + G GLNL + ++ + WW+ +Q +R + G Sbjct: 965 IDRFQDGDTPVFLISLKAGGTGLNLT-AADTVIHYDPWWNPAAEKQATDR-----AHRIG 1018 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKK 200 + VFVY LIA+ T++E + + + K + D +L K Sbjct: 1019 QDKPVFVYKLIAEGTVEEKIQEMQQHKQNLADSILEGKGK 1058 >gi|289525600|emb|CBJ15078.1| putative helicase (SWF/SNF family) [Chlamydia trachomatis Sweden2] gi|296435160|gb|ADH17338.1| SWI/SNF family helicase [Chlamydia trachomatis E/150] gi|296438880|gb|ADH21033.1| SWI/SNF family helicase [Chlamydia trachomatis E/11023] Length = 1199 Score = 43.9 bits (102), Expect = 0.015, Method: Compositional matrix adjust. Identities = 25/94 (26%), Positives = 51/94 (54%), Gaps = 14/94 (14%) Query: 118 SCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 + G G+NL GN+++ + WW+ + Q ++R+ + G K VF+Y L+ ++T++ Sbjct: 1089 AAGTGINLT-AGNVVIMYDRWWNPAKENQALDRV-----HRIGQKNTVFIYKLVTEDTLE 1142 Query: 178 ELV-------LQRLRTKSTIQDL-LLNALKKETI 203 E + ++ L +T QD +L+ L +E + Sbjct: 1143 EHIHYLIEKKMRLLNQVTTTQDSNILHVLNREDL 1176 >gi|255348934|ref|ZP_05380941.1| SWI/SNF family helicase [Chlamydia trachomatis 70] gi|255503474|ref|ZP_05381864.1| SWI/SNF family helicase [Chlamydia trachomatis 70s] Length = 1199 Score = 43.9 bits (102), Expect = 0.015, Method: Compositional matrix adjust. Identities = 25/94 (26%), Positives = 51/94 (54%), Gaps = 14/94 (14%) Query: 118 SCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 + G G+NL GN+++ + WW+ + Q ++R+ + G K VF+Y L+ ++T++ Sbjct: 1089 AAGTGINLT-AGNVVIMYDRWWNPAKENQALDRV-----HRIGQKNTVFIYKLVTEDTLE 1142 Query: 178 ELV-------LQRLRTKSTIQDL-LLNALKKETI 203 E + ++ L +T QD +L+ L +E + Sbjct: 1143 EHIHYLIEKKMRLLNQVTTTQDSNILHVLNREDL 1176 >gi|296122550|ref|YP_003630328.1| SNF2-related protein [Planctomyces limnophilus DSM 3776] gi|296014890|gb|ADG68129.1| SNF2-related protein [Planctomyces limnophilus DSM 3776] Length = 1112 Score = 43.9 bits (102), Expect = 0.015, Method: Compositional matrix adjust. Identities = 40/152 (26%), Positives = 66/152 (43%), Gaps = 16/152 (10%) Query: 47 HWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNE 106 H +E+ E K L + + + IV H D A + + G+T D+ C + N+ Sbjct: 954 HLEELVGEGHKTL--VFSQFTSMLAIVRKHL--DRAGITYEYLDGQTRDRKECVERFQND 1009 Query: 107 GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER---IGVTRQRQAGFKR 163 + + G GLNL + + WW+ Q I+R +G TRQ Sbjct: 1010 KDCGVFLISLKAGGLGLNLTAADYVFIL-DPWWNPAVETQAIDRAHRVGQTRQ------- 1061 Query: 164 AVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 VF Y LI +NT++E + + + K + D +L Sbjct: 1062 -VFAYRLICKNTVEEKIAELQKQKRELADAIL 1092 >gi|109470653|ref|XP_001080838.1| PREDICTED: yeast INO80-like protein-like [Rattus norvegicus] Length = 1559 Score = 43.9 bits (102), Expect = 0.015, Method: Compositional matrix adjust. Identities = 27/80 (33%), Positives = 42/80 (52%), Gaps = 10/80 (12%) Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQM--IERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 G G+NL ++ + S W + Q M R+G T+Q V VY LI + TI+ Sbjct: 1183 GLGINLTAADTVIFYDSDWNPTVDQQAMDRAHRLGQTKQ--------VTVYRLICKGTIE 1234 Query: 178 ELVLQRLRTKSTIQDLLLNA 197 E +LQR + KS IQ ++++ Sbjct: 1235 ERILQRAKEKSEIQRMVISG 1254 >gi|188532517|ref|YP_001906314.1| Putative helicase [Erwinia tasmaniensis Et1/99] gi|188027559|emb|CAO95406.1| Putative helicase [Erwinia tasmaniensis Et1/99] Length = 890 Score = 43.9 bits (102), Expect = 0.015, Method: Compositional matrix adjust. Identities = 27/106 (25%), Positives = 55/106 (51%), Gaps = 7/106 (6%) Query: 91 GRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 G T D++ ++ + +G++P+ + G GLNL + ++ + WW+ Q +R Sbjct: 772 GSTRDRNE-PVRRFQQGEVPVFLISLKAGGVGLNLT-AADTVIHYDPWWNPAAENQATDR 829 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + G + VFVY LIA +TI+E ++ + K+ + + +L+ Sbjct: 830 A-----YRLGQDKPVFVYKLIAADTIEEKIVALQQQKADLAEEILS 870 >gi|15605284|ref|NP_220070.1| SWI/SNF family helicase [Chlamydia trachomatis D/UW-3/CX] gi|3328995|gb|AAC68157.1| SWI/SNF family helicase [Chlamydia trachomatis D/UW-3/CX] gi|296437016|gb|ADH19186.1| SWI/SNF family helicase [Chlamydia trachomatis G/11222] Length = 1199 Score = 43.5 bits (101), Expect = 0.015, Method: Compositional matrix adjust. Identities = 25/94 (26%), Positives = 51/94 (54%), Gaps = 14/94 (14%) Query: 118 SCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 + G G+NL GN+++ + WW+ + Q ++R+ + G K VF+Y L+ ++T++ Sbjct: 1089 AAGTGINLT-AGNVVIMYDRWWNPAKENQALDRV-----HRIGQKNTVFIYKLVTEDTLE 1142 Query: 178 ELV-------LQRLRTKSTIQDL-LLNALKKETI 203 E + ++ L +T QD +L+ L +E + Sbjct: 1143 EHIHYLIEKKMRLLNQVTTTQDSNILHVLNREDL 1176 >gi|237804906|ref|YP_002889060.1| putative helicase (SWF/SNF family) [Chlamydia trachomatis B/TZ1A828/OT] gi|231273206|emb|CAX10119.1| putative helicase (SWF/SNF family) [Chlamydia trachomatis B/TZ1A828/OT] Length = 1199 Score = 43.5 bits (101), Expect = 0.015, Method: Compositional matrix adjust. Identities = 25/94 (26%), Positives = 51/94 (54%), Gaps = 14/94 (14%) Query: 118 SCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 + G G+NL GN+++ + WW+ + Q ++R+ + G K VF+Y L+ ++T++ Sbjct: 1089 AAGTGINLT-AGNVVIMYDRWWNPAKENQALDRV-----HRIGQKNTVFIYKLVTEDTLE 1142 Query: 178 ELV-------LQRLRTKSTIQDL-LLNALKKETI 203 E + ++ L +T QD +L+ L +E + Sbjct: 1143 EHIHYLIEKKMRLLNQVTTTQDSNILHVLNREDL 1176 >gi|156549903|ref|XP_001601964.1| PREDICTED: similar to conserved hypothetical protein [Nasonia vitripennis] Length = 899 Score = 43.5 bits (101), Expect = 0.015, Method: Compositional matrix adjust. Identities = 26/78 (33%), Positives = 43/78 (55%), Gaps = 6/78 (7%) Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 G GLNL G + L+ F W+ Q + RI + G KR+VF+Y L+ TI+E Sbjct: 716 GVGLNL-VGASRLILFDSDWNPANDAQAMARIW-----RDGQKRSVFIYRLLTTGTIEEK 769 Query: 180 VLQRLRTKSTIQDLLLNA 197 + QR +K+ + + +++A Sbjct: 770 IYQRQISKTGLSEAVVDA 787 >gi|146292471|ref|YP_001182895.1| SNF2-like protein [Shewanella putrefaciens CN-32] gi|145564161|gb|ABP75096.1| SNF2-related protein [Shewanella putrefaciens CN-32] Length = 1073 Score = 43.5 bits (101), Expect = 0.015, Method: Compositional matrix adjust. Identities = 26/100 (26%), Positives = 47/100 (47%), Gaps = 6/100 (6%) Query: 101 IQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 I + +G P+ + G GLNL + ++ + WW+ +Q +R + G Sbjct: 965 IDRFQDGDTPVFLISLKAGGTGLNLT-AADTVIHYDPWWNPAAEKQATDR-----AHRIG 1018 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKK 200 + VFVY LIA+ T++E + + + K + D +L K Sbjct: 1019 QDKPVFVYKLIAEGTVEEKIQEMQQHKQNLADSILEGKGK 1058 >gi|126348422|emb|CAJ90145.1| putative helicase [Streptomyces ambofaciens ATCC 23877] Length = 976 Score = 43.5 bits (101), Expect = 0.015, Method: Composition-based stats. Identities = 25/97 (25%), Positives = 47/97 (48%), Gaps = 6/97 (6%) Query: 101 IQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 ++ + +G++P+ + G GLNL ++ V F WW+ +E R + G Sbjct: 862 VRRFQDGEVPVFLLSLKAAGTGLNLTRAEHV-VHFDRWWN-----PAVEAQATDRAYRIG 915 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 R V V+ L+A+ T+++ + L K + D +L A Sbjct: 916 QTRPVQVHRLVAEGTVEDRIAALLHRKRKLADAVLGA 952 >gi|300708513|ref|XP_002996434.1| hypothetical protein NCER_100481 [Nosema ceranae BRL01] gi|239605736|gb|EEQ82763.1| hypothetical protein NCER_100481 [Nosema ceranae BRL01] Length = 858 Score = 43.5 bits (101), Expect = 0.016, Method: Compositional matrix adjust. Identities = 25/98 (25%), Positives = 48/98 (48%), Gaps = 6/98 (6%) Query: 100 TIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQA 159 T+ +W G + + G G+NL + ++F+ W+ QQ ++R + Sbjct: 759 TVNDWQTGDKFIFLLSTRAGGLGINLT-AADTVIFYDSDWNPTVDQQAMDR-----AYRI 812 Query: 160 GFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 G + V VY LI +NTI+E V+++ K +Q +++ Sbjct: 813 GQTKDVTVYRLITKNTIEERVIEKATHKGNLQKMVIKG 850 >gi|166154770|ref|YP_001654888.1| helicase [Chlamydia trachomatis 434/Bu] gi|166155645|ref|YP_001653900.1| helicase [Chlamydia trachomatis L2b/UCH-1/proctitis] gi|301336044|ref|ZP_07224288.1| helicase [Chlamydia trachomatis L2tet1] gi|165930758|emb|CAP04255.1| putative helicase (SWF/SNF family) [Chlamydia trachomatis 434/Bu] gi|165931633|emb|CAP07209.1| putative helicase (SWF/SNF family) [Chlamydia trachomatis L2b/UCH-1/proctitis] Length = 1199 Score = 43.5 bits (101), Expect = 0.016, Method: Compositional matrix adjust. Identities = 25/94 (26%), Positives = 51/94 (54%), Gaps = 14/94 (14%) Query: 118 SCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 + G G+NL GN+++ + WW+ + Q ++R+ + G K VF+Y L+ ++T++ Sbjct: 1089 AAGTGINLT-AGNVVIMYDRWWNPAKENQALDRV-----HRIGQKNTVFIYKLVTEDTLE 1142 Query: 178 ELV-------LQRLRTKSTIQDL-LLNALKKETI 203 E + ++ L +T QD +L+ L +E + Sbjct: 1143 EHIHYLIEKKMRLLNQVTTTQDSNILHVLNREDL 1176 >gi|76789292|ref|YP_328378.1| SWF/SNF family helicase [Chlamydia trachomatis A/HAR-13] gi|237802984|ref|YP_002888178.1| putative helicase (SWF/SNF family) [Chlamydia trachomatis B/Jali20/OT] gi|76167822|gb|AAX50830.1| SWF/SNF family helicase [Chlamydia trachomatis A/HAR-13] gi|231274218|emb|CAX11012.1| putative helicase (SWF/SNF family) [Chlamydia trachomatis B/Jali20/OT] Length = 1199 Score = 43.5 bits (101), Expect = 0.016, Method: Compositional matrix adjust. Identities = 25/94 (26%), Positives = 51/94 (54%), Gaps = 14/94 (14%) Query: 118 SCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 + G G+NL GN+++ + WW+ + Q ++R+ + G K VF+Y L+ ++T++ Sbjct: 1089 AAGTGINLT-AGNVVIMYDRWWNPAKENQALDRV-----HRIGQKNTVFIYKLVTEDTLE 1142 Query: 178 ELV-------LQRLRTKSTIQDL-LLNALKKETI 203 E + ++ L +T QD +L+ L +E + Sbjct: 1143 EHIHYLIEKKMRLLNQVTTTQDSNILHVLNREDL 1176 >gi|257438160|ref|ZP_05613915.1| N-domain protein, SNF2 family [Faecalibacterium prausnitzii A2-165] gi|257199491|gb|EEU97775.1| N-domain protein, SNF2 family [Faecalibacterium prausnitzii A2-165] Length = 1119 Score = 43.5 bits (101), Expect = 0.016, Method: Compositional matrix adjust. Identities = 45/185 (24%), Positives = 83/185 (44%), Gaps = 24/185 (12%) Query: 9 RELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANA 68 RE+ CD + ++K C++L AV E H + + LE++ ++ +A Sbjct: 931 REICCDPRLIADNWTGGSAKLDACIELVTSAV---ESGHRILLFSQFTSMLELLAKRLDA 987 Query: 69 APIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYG 128 + HF LQ + P+ + ++ +N G+ + + G GLNL Sbjct: 988 EGV---SHFT-----LQGSTPKPVRAE----LVRRFNGGEASVFLISLRAGGTGLNLT-A 1034 Query: 129 GNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKS 188 +I++ + WW++ Q +R + G + V VY LI Q+TI+E +++ + K Sbjct: 1035 ADIVIHYDPWWNVAAQNQATDRA-----YRIGQQNPVQVYKLITQDTIEEKIVELQQAK- 1088 Query: 189 TIQDL 193 QDL Sbjct: 1089 --QDL 1091 >gi|329664944|ref|NP_001192313.1| putative DNA helicase INO80 complex homolog 1 [Bos taurus] gi|296483346|gb|DAA25461.1| brahma-like [Bos taurus] Length = 1566 Score = 43.5 bits (101), Expect = 0.016, Method: Compositional matrix adjust. Identities = 27/80 (33%), Positives = 42/80 (52%), Gaps = 10/80 (12%) Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQM--IERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 G G+NL ++ + S W + Q M R+G T+Q V VY LI + TI+ Sbjct: 1190 GLGINLTAADTVIFYDSDWNPTVDQQAMDRAHRLGQTKQ--------VTVYRLICKGTIE 1241 Query: 178 ELVLQRLRTKSTIQDLLLNA 197 E +LQR + KS IQ ++++ Sbjct: 1242 ERILQRAKEKSEIQRMVISG 1261 >gi|331003253|ref|ZP_08326760.1| hypothetical protein HMPREF0491_01622 [Lachnospiraceae oral taxon 107 str. F0167] gi|330412906|gb|EGG92286.1| hypothetical protein HMPREF0491_01622 [Lachnospiraceae oral taxon 107 str. F0167] Length = 1137 Score = 43.5 bits (101), Expect = 0.016, Method: Composition-based stats. Identities = 26/96 (27%), Positives = 46/96 (47%), Gaps = 6/96 (6%) Query: 101 IQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 + ++N + + G GLNL G +I++ + WW+ Q +R + G Sbjct: 1028 VNDFNNDDTNVFLISLKAGGTGLNL-VGADIVIHYDPWWNFAAQNQATDR-----AHRIG 1081 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 K V VY LI + TI+E +++ +K + D +LN Sbjct: 1082 QKNNVTVYRLITKGTIEERIVKLQESKKDLADRVLN 1117 >gi|220904807|ref|YP_002480119.1| Non-specific serine/threonine protein kinase [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774] gi|219869106|gb|ACL49441.1| Non-specific serine/threonine protein kinase [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774] Length = 1091 Score = 43.5 bits (101), Expect = 0.016, Method: Compositional matrix adjust. Identities = 25/91 (27%), Positives = 42/91 (46%), Gaps = 6/91 (6%) Query: 105 NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA 164 N IP+ + G GLNL + ++ + WW+ +E R + G R Sbjct: 987 NSPDIPIFLISLKAGGTGLNLT-SADYVIHYDPWWN-----PAVESQATDRTHRIGQTRQ 1040 Query: 165 VFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 VF Y LI QNT++E +L+ K + + ++ Sbjct: 1041 VFSYKLICQNTVEEKILKLQEAKRGVAEAII 1071 >gi|295835221|ref|ZP_06822154.1| SNF2/helicase domain-containing protein [Streptomyces sp. SPB74] gi|295825374|gb|EDY45121.2| SNF2/helicase domain-containing protein [Streptomyces sp. SPB74] Length = 923 Score = 43.5 bits (101), Expect = 0.016, Method: Composition-based stats. Identities = 24/97 (24%), Positives = 48/97 (49%), Gaps = 6/97 (6%) Query: 101 IQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 ++ + +G++P+ + G GLNL ++ V + WW+ +E R + G Sbjct: 810 VRRFQDGEVPVFLLSLKAAGTGLNLTRADHV-VHYDRWWN-----PAVEAQATDRAHRIG 863 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 R V V+ LIA+ TI++ + + +K + D +L + Sbjct: 864 QTRPVQVHRLIAEGTIEDRIAALMESKRELADAVLGS 900 >gi|297748685|gb|ADI51231.1| SWF/SNF family helicase [Chlamydia trachomatis D-EC] gi|297749565|gb|ADI52243.1| SWF/SNF family helicase [Chlamydia trachomatis D-LC] Length = 1202 Score = 43.5 bits (101), Expect = 0.016, Method: Compositional matrix adjust. Identities = 25/94 (26%), Positives = 51/94 (54%), Gaps = 14/94 (14%) Query: 118 SCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 + G G+NL GN+++ + WW+ + Q ++R+ + G K VF+Y L+ ++T++ Sbjct: 1092 AAGTGINLT-AGNVVIMYDRWWNPAKENQALDRV-----HRIGQKNTVFIYKLVTEDTLE 1145 Query: 178 ELV-------LQRLRTKSTIQDL-LLNALKKETI 203 E + ++ L +T QD +L+ L +E + Sbjct: 1146 EHIHYLIEKKMRLLNQVTTTQDSNILHVLNREDL 1179 >gi|212702386|ref|ZP_03310514.1| hypothetical protein DESPIG_00400 [Desulfovibrio piger ATCC 29098] gi|212674185|gb|EEB34668.1| hypothetical protein DESPIG_00400 [Desulfovibrio piger ATCC 29098] Length = 1085 Score = 43.5 bits (101), Expect = 0.017, Method: Compositional matrix adjust. Identities = 25/91 (27%), Positives = 42/91 (46%), Gaps = 6/91 (6%) Query: 105 NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA 164 N IP+ + G GLNL + ++ + WW+ +E R + G R Sbjct: 981 NSPDIPIFLISLKAGGTGLNLT-SADYVIHYDPWWN-----PAVESQATDRTHRIGQTRQ 1034 Query: 165 VFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 VF Y LI QNT++E +L+ K + + ++ Sbjct: 1035 VFSYKLICQNTVEEKILKLQEAKRGVAEAII 1065 >gi|325661424|ref|ZP_08150050.1| hypothetical protein HMPREF0490_00784 [Lachnospiraceae bacterium 4_1_37FAA] gi|325472373|gb|EGC75585.1| hypothetical protein HMPREF0490_00784 [Lachnospiraceae bacterium 4_1_37FAA] Length = 493 Score = 43.5 bits (101), Expect = 0.017, Method: Compositional matrix adjust. Identities = 53/201 (26%), Positives = 87/201 (43%), Gaps = 22/201 (10%) Query: 6 KFQRELYCDLQGENIEAFNSASK---TVKCLQLANGAVYYDEEKHWK--EVHDEKIKALE 60 K QR+ Y D+ + E N SK T K ++L + +K+ + K LE Sbjct: 295 KNQRKYYNDILNDIKEHINEWSKFEFTAKLMKLREVVSGFVIQKNGDVTDFKTNKDNILE 354 Query: 61 VIIEKANAAPIIVAYHFNSDLARLQKAFP----QGRTLDKDPCTIQEWNEGKIPLLFAHP 116 + + +IV F ++ +L + F +T ++D I+ + G I LLFAHP Sbjct: 355 DTLNEIGDKQVIVWCQFIHEIEKLAEKFDGTALTSKTKNRDD-IIRSFKNGDIKLLFAHP 413 Query: 117 ASCGHG---LNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQ 173 G G N Y +++SL + EE +Q +RI R + ++ L + Sbjct: 414 KLLGKGATFTNCTYN----IYYSLSFSYEEFKQSQDRI----HRIGQANKCTYI-ILQGK 464 Query: 174 NTIDELVLQRLRTKSTIQDLL 194 NTID+ + L+ K D L Sbjct: 465 NTIDKRIYNSLQRKGNAVDEL 485 >gi|296436088|gb|ADH18262.1| putative helicase (SWF/SNF family) protein [Chlamydia trachomatis G/9768] gi|296437949|gb|ADH20110.1| putative helicase (SWF/SNF family) protein [Chlamydia trachomatis G/11074] gi|297140449|gb|ADH97207.1| putative helicase (SWF/SNF family) protein [Chlamydia trachomatis G/9301] Length = 1199 Score = 43.5 bits (101), Expect = 0.017, Method: Compositional matrix adjust. Identities = 25/94 (26%), Positives = 51/94 (54%), Gaps = 14/94 (14%) Query: 118 SCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 + G G+NL GN+++ + WW+ + Q ++R+ + G K VF+Y L+ ++T++ Sbjct: 1089 AAGTGINLT-AGNVVIMYDRWWNPAKENQALDRV-----HRIGQKNTVFIYKLVTEDTLE 1142 Query: 178 ELV-------LQRLRTKSTIQDL-LLNALKKETI 203 E + ++ L +T QD +L+ L +E + Sbjct: 1143 EHIHYLIEKKMRLLNQVTTTQDSNILHVLNREDL 1176 >gi|108763874|ref|YP_633501.1| SNF2/helicase domain-containing protein [Myxococcus xanthus DK 1622] gi|108467754|gb|ABF92939.1| SNF2/helicase domain protein [Myxococcus xanthus DK 1622] Length = 1083 Score = 43.5 bits (101), Expect = 0.017, Method: Composition-based stats. Identities = 43/162 (26%), Positives = 67/162 (41%), Gaps = 22/162 (13%) Query: 26 ASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQ 85 ++K + LQL V E H V + + LE++ ++A D L+ Sbjct: 913 SAKVERFLQLVEDLV---AEGHRALVFSQFTEMLELLKQEA-------------DKKGLR 956 Query: 86 KAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQ 145 + GRT D+ + N PL F + G GLNL + ++ F WW+ Sbjct: 957 YLYLDGRTKDRMGKVDEYNNPDGPPLFFISLKAGGTGLNLT-AADYVIHFDPWWN----- 1010 Query: 146 QMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTK 187 +E R + G RAV Y LI + T++E +L R K Sbjct: 1011 PAVEDQATDRTHRIGQTRAVISYKLITRGTVEEKILALQRRK 1052 >gi|302823829|ref|XP_002993563.1| hypothetical protein SELMODRAFT_137237 [Selaginella moellendorffii] gi|300138630|gb|EFJ05392.1| hypothetical protein SELMODRAFT_137237 [Selaginella moellendorffii] Length = 852 Score = 43.5 bits (101), Expect = 0.017, Method: Compositional matrix adjust. Identities = 29/82 (35%), Positives = 42/82 (51%), Gaps = 6/82 (7%) Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 G GLNL GGN LV F W+ +Q R+ + G K+ V++Y +A TI+E Sbjct: 588 GCGLNL-IGGNRLVLFDPDWNPANDKQAAARVW-----RDGQKKRVYIYRFLATGTIEEK 641 Query: 180 VLQRLRTKSTIQDLLLNALKKE 201 V QR +K +Q ++ K E Sbjct: 642 VYQRQISKEGLQKVISGDSKAE 663 >gi|255311373|ref|ZP_05353943.1| putative helicase (SWF/SNF family) protein [Chlamydia trachomatis 6276] gi|255317674|ref|ZP_05358920.1| putative helicase (SWF/SNF family) protein [Chlamydia trachomatis 6276s] Length = 1199 Score = 43.5 bits (101), Expect = 0.017, Method: Compositional matrix adjust. Identities = 25/94 (26%), Positives = 51/94 (54%), Gaps = 14/94 (14%) Query: 118 SCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 + G G+NL GN+++ + WW+ + Q ++R+ + G K VF+Y L+ ++T++ Sbjct: 1089 AAGTGINLT-AGNVVIMYDRWWNPAKENQALDRV-----HRIGQKNTVFIYKLVTEDTLE 1142 Query: 178 ELV-------LQRLRTKSTIQDL-LLNALKKETI 203 E + ++ L +T QD +L+ L +E + Sbjct: 1143 EHIHYLIEKKMRLLNQVTTTQDSNILHVLNREDL 1176 >gi|169830699|ref|YP_001716681.1| helicase domain-containing protein [Candidatus Desulforudis audaxviator MP104C] gi|169637543|gb|ACA59049.1| helicase domain protein [Candidatus Desulforudis audaxviator MP104C] Length = 1147 Score = 43.5 bits (101), Expect = 0.017, Method: Compositional matrix adjust. Identities = 33/94 (35%), Positives = 52/94 (55%), Gaps = 8/94 (8%) Query: 102 QEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGF 161 Q++ EG+I +L A A+ G G+NLQ NIL + + W+ +Q + RI + G Sbjct: 548 QQFREGEIQVLVATEAA-GEGINLQVC-NILFNYDIPWNPNRLEQRMGRI-----HRYGQ 600 Query: 162 KRAVFVYYLIAQNTIDELVLQRLRTK-STIQDLL 194 ++ ++ +A NTI+ VLQRL K I+D L Sbjct: 601 RKDCLIFNFVATNTIEGRVLQRLLEKLQEIRDAL 634 >gi|29828520|ref|NP_823154.1| SNF2/RAD54 family helicase [Streptomyces avermitilis MA-4680] gi|29605624|dbj|BAC69689.1| putative SNF2/RAD54 family helicase [Streptomyces avermitilis MA-4680] Length = 962 Score = 43.5 bits (101), Expect = 0.017, Method: Composition-based stats. Identities = 25/97 (25%), Positives = 45/97 (46%), Gaps = 6/97 (6%) Query: 101 IQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 + + G P+L + G GLNL G++ V F WW+ +E R + G Sbjct: 849 VDRFQSGTTPVLVLSLKAAGTGLNLTRAGHV-VHFDRWWN-----PAVEEQATDRAYRIG 902 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + V V+ LI + T+++ + + L K + D +L + Sbjct: 903 QTQPVQVHRLITEGTVEDRIAEMLEAKRALADAILGS 939 >gi|330797032|ref|XP_003286567.1| hypothetical protein DICPUDRAFT_97424 [Dictyostelium purpureum] gi|325083472|gb|EGC36924.1| hypothetical protein DICPUDRAFT_97424 [Dictyostelium purpureum] Length = 1281 Score = 43.5 bits (101), Expect = 0.017, Method: Compositional matrix adjust. Identities = 35/104 (33%), Positives = 50/104 (48%), Gaps = 18/104 (17%) Query: 101 IQEWNEGKIP----LLFAHPASCGHGLNLQYGGNILVFFSLW---WDLEEHQQMIERIGV 153 + EWN P +L H + G G+NLQ +++F S W DL+ Q RIG Sbjct: 851 VVEWNRPDSPFWIFVLSTH--AGGLGMNLQTADTVIIFDSDWNPQMDLQ-AQDRCHRIGQ 907 Query: 154 TRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 T AV VY LI+ N+I+E +L+R K I ++ A Sbjct: 908 TN--------AVNVYRLISANSIEEKILERATDKLEIDAKIIQA 943 >gi|302408325|ref|XP_003001997.1| DNA repair and recombination protein RAD54 [Verticillium albo-atrum VaMs.102] gi|261358918|gb|EEY21346.1| DNA repair and recombination protein RAD54 [Verticillium albo-atrum VaMs.102] Length = 857 Score = 43.5 bits (101), Expect = 0.017, Method: Compositional matrix adjust. Identities = 26/78 (33%), Positives = 40/78 (51%), Gaps = 6/78 (7%) Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 G G+NL G N LV F W+ QQ + R+ + G K+ FVY IA TI+E Sbjct: 695 GCGINL-IGANRLVLFDPDWNPAADQQALARVW-----RDGQKKDCFVYRFIATGTIEEK 748 Query: 180 VLQRLRTKSTIQDLLLNA 197 + QR K ++ ++++ Sbjct: 749 IFQRQSHKQSLSSCVVDS 766 >gi|37360298|dbj|BAC98127.1| mKIAA1259 protein [Mus musculus] Length = 1196 Score = 43.5 bits (101), Expect = 0.018, Method: Compositional matrix adjust. Identities = 27/80 (33%), Positives = 42/80 (52%), Gaps = 10/80 (12%) Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQM--IERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 G G+NL ++ + S W + Q M R+G T+Q V VY LI + TI+ Sbjct: 820 GLGINLTAADTVIFYDSDWNPTVDQQAMDRAHRLGQTKQ--------VTVYRLICKGTIE 871 Query: 178 ELVLQRLRTKSTIQDLLLNA 197 E +LQR + KS IQ ++++ Sbjct: 872 ERILQRAKEKSEIQRMVISG 891 >gi|195158016|ref|XP_002019890.1| GL11967 [Drosophila persimilis] gi|194116481|gb|EDW38524.1| GL11967 [Drosophila persimilis] Length = 220 Score = 43.5 bits (101), Expect = 0.018, Method: Compositional matrix adjust. Identities = 26/78 (33%), Positives = 44/78 (56%), Gaps = 13/78 (16%) Query: 131 ILVFFSLWWDLEEHQQMIER---IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTK 187 +++F+ W+ QQ ++R +G T+Q V VY LI + TI+E +LQR R K Sbjct: 2 LVIFYDSDWNPTVDQQAMDRAHRLGQTKQ--------VTVYRLICKGTIEERILQRAREK 53 Query: 188 STIQDLLLNA--LKKETI 203 S IQ ++++ K +T+ Sbjct: 54 SEIQRMVISGGNFKPDTL 71 >gi|300718555|ref|YP_003743358.1| helicase/SNF2 domain-containing protein [Erwinia billingiae Eb661] gi|299064391|emb|CAX61511.1| helicase/SNF2 domain-containing protein [Erwinia billingiae Eb661] Length = 877 Score = 43.5 bits (101), Expect = 0.018, Method: Compositional matrix adjust. Identities = 29/106 (27%), Positives = 53/106 (50%), Gaps = 9/106 (8%) Query: 91 GRTLDK-DPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIE 149 G T D+ +P ++ + EG++P+ + G GLNL + ++ + WW+ Q + Sbjct: 758 GSTRDRIEP--VRRFQEGEVPVFLISLKAGGVGLNLT-AADTVIHYDPWWNPAAENQATD 814 Query: 150 RIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 R + G + VFVY LIA +I+E ++ K+ + D +L Sbjct: 815 RA-----YRLGQDKPVFVYKLIAAGSIEEKIVALQGQKAELADSIL 855 >gi|288962950|ref|YP_003453244.1| SNF2 family DNA/RNA helicase [Azospirillum sp. B510] gi|288915216|dbj|BAI76700.1| SNF2 family DNA/RNA helicase [Azospirillum sp. B510] Length = 1172 Score = 43.5 bits (101), Expect = 0.018, Method: Composition-based stats. Identities = 28/105 (26%), Positives = 50/105 (47%), Gaps = 9/105 (8%) Query: 80 DLARLQKAFPQ--GRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSL 137 +L RL F + G T D++ + + G++PL + G GLNL + ++ + Sbjct: 1038 ELERLAIPFVELTGDTRDRE-TPVNRFQAGEVPLFLISLKAGGTGLNLT-AADTVIHYDP 1095 Query: 138 WWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQ 182 WW+ +E R + G + VFVY L+ T++E ++Q Sbjct: 1096 WWN-----PAVEDQATDRAHRIGQDKPVFVYKLVTTGTVEERMVQ 1135 >gi|237749385|ref|ZP_04579865.1| helicase [Oxalobacter formigenes OXCC13] gi|229380747|gb|EEO30838.1| helicase [Oxalobacter formigenes OXCC13] Length = 1125 Score = 43.5 bits (101), Expect = 0.018, Method: Compositional matrix adjust. Identities = 33/144 (22%), Positives = 69/144 (47%), Gaps = 16/144 (11%) Query: 71 IIVAYHFNSDLARLQ-----KAFP----QGRTLDKDPCTIQEWNEGKIPLLFAHPASCGH 121 I+V F S L+ ++ ++ P G T D+ I+ + +GK+ + + G Sbjct: 969 ILVFSQFTSMLSLIETELKNRSIPYEILTGDTTDR-ASAIRNFQDGKVSVFLISLKAGGV 1027 Query: 122 GLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVL 181 GLNL + ++ + WW+ +E R + G + VFVY LIA+ T++E + Sbjct: 1028 GLNLT-AADTVIHYDPWWN-----PAVENQATDRAWRIGQDKPVFVYKLIAKGTLEEKIQ 1081 Query: 182 QRLRTKSTIQDLLLNALKKETIHV 205 + + K+ + +L++ + + + + Sbjct: 1082 ELQQRKADLATAMLSSGQAQHVQI 1105 >gi|226943215|ref|YP_002798288.1| helicase protein [Azotobacter vinelandii DJ] gi|226718142|gb|ACO77313.1| helicase protein [Azotobacter vinelandii DJ] Length = 872 Score = 43.5 bits (101), Expect = 0.019, Method: Composition-based stats. Identities = 27/102 (26%), Positives = 51/102 (50%), Gaps = 7/102 (6%) Query: 101 IQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 ++E+ G++P+ + G GLNL + ++ F WW+ Q + R + G Sbjct: 761 VEEFQAGRVPVFLISLKAGGAGLNLT-AADTVIHFDPWWNPAAEAQASD-----RAYRIG 814 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTI-QDLLLNALKKE 201 + VFVY LIA+ +++E + + K+ + LL A++ E Sbjct: 815 QDKPVFVYRLIARGSVEEKIQHLQKAKAELAHGLLEGAIQGE 856 >gi|303327511|ref|ZP_07357952.1| Snf2 family protein [Desulfovibrio sp. 3_1_syn3] gi|302862451|gb|EFL85384.1| Snf2 family protein [Desulfovibrio sp. 3_1_syn3] Length = 1085 Score = 43.5 bits (101), Expect = 0.019, Method: Compositional matrix adjust. Identities = 25/91 (27%), Positives = 42/91 (46%), Gaps = 6/91 (6%) Query: 105 NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA 164 N IP+ + G GLNL + ++ + WW+ +E R + G R Sbjct: 981 NSPDIPIFLISLKAGGTGLNLT-SADYVIHYDPWWN-----PAVESQATDRTHRIGQTRQ 1034 Query: 165 VFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 VF Y LI QNT++E +L+ K + + ++ Sbjct: 1035 VFSYKLICQNTVEEKILKLQEAKRGVAEAII 1065 >gi|189211141|ref|XP_001941901.1| helicase swr1 [Pyrenophora tritici-repentis Pt-1C-BFP] gi|187977994|gb|EDU44620.1| helicase swr1 [Pyrenophora tritici-repentis Pt-1C-BFP] Length = 812 Score = 43.5 bits (101), Expect = 0.019, Method: Compositional matrix adjust. Identities = 31/101 (30%), Positives = 49/101 (48%), Gaps = 12/101 (11%) Query: 101 IQEWNEGKIP----LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 + ++N+ + P LL + CG LNL G N LV F W+ QQ + R+ Sbjct: 622 VDKFNDPESPEFVFLLSSKAGGCG--LNL-IGANRLVLFDPDWNPAADQQALARVW---- 674 Query: 157 RQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + G K+ FVY I TI+E V QR K ++ ++++ Sbjct: 675 -RDGQKKDCFVYRFITTGTIEEKVFQRQSHKQSLSSCVVDS 714 >gi|315648297|ref|ZP_07901398.1| SNF2-related protein [Paenibacillus vortex V453] gi|315276943|gb|EFU40286.1| SNF2-related protein [Paenibacillus vortex V453] Length = 1109 Score = 43.5 bits (101), Expect = 0.019, Method: Compositional matrix adjust. Identities = 28/94 (29%), Positives = 51/94 (54%), Gaps = 7/94 (7%) Query: 102 QEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGF 161 + +NEG+ + + G GLNL G + ++ + LWW+ QQ +R + G Sbjct: 999 ERFNEGEREVFLISLKAGGTGLNLT-GADTVILYDLWWNPAVEQQATDR-----AHRIGQ 1052 Query: 162 KRAVFVYYLIAQNTI-DELVLQRLRTKSTIQDLL 194 K+ V V L+AQ+TI D++ + + K+ I++L+ Sbjct: 1053 KKVVQVIRLVAQDTIEDKMYALQQKKKNLIEELV 1086 >gi|330930041|ref|XP_003302867.1| hypothetical protein PTT_14851 [Pyrenophora teres f. teres 0-1] gi|311321495|gb|EFQ89043.1| hypothetical protein PTT_14851 [Pyrenophora teres f. teres 0-1] Length = 812 Score = 43.5 bits (101), Expect = 0.019, Method: Compositional matrix adjust. Identities = 31/101 (30%), Positives = 49/101 (48%), Gaps = 12/101 (11%) Query: 101 IQEWNEGKIP----LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 + ++N+ + P LL + CG LNL G N LV F W+ QQ + R+ Sbjct: 622 VDKFNDPESPEFVFLLSSKAGGCG--LNL-IGANRLVLFDPDWNPAADQQALARVW---- 674 Query: 157 RQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + G K+ FVY I TI+E V QR K ++ ++++ Sbjct: 675 -RDGQKKDCFVYRFITTGTIEEKVFQRQSHKQSLSSCVVDS 714 >gi|289706474|ref|ZP_06502828.1| SNF2 family N-terminal domain protein [Micrococcus luteus SK58] gi|289556793|gb|EFD50130.1| SNF2 family N-terminal domain protein [Micrococcus luteus SK58] Length = 1143 Score = 43.5 bits (101), Expect = 0.019, Method: Composition-based stats. Identities = 30/117 (25%), Positives = 55/117 (47%), Gaps = 7/117 (5%) Query: 80 DLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWW 139 D ++ A+ G T + I+ + EG+ P+ + G GL L + + WW Sbjct: 1007 DHLEIEHAYLDGSTRGRAE-VIRGFREGEAPVFLISLKAGGFGLTLTEADYVFLM-DPWW 1064 Query: 140 DLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + Q ++R + G +R V VY L+++ TI+E VL+ R K+ + L++ Sbjct: 1065 NPAAEAQAVDR-----AHRIGQERTVMVYRLVSEGTIEEKVLELQRRKAELFGALMD 1116 >gi|19173110|ref|NP_597661.1| similarity to HELICASE MOT1 [Encephalitozoon cuniculi GB-M1] gi|19168777|emb|CAD26296.1| similarity to HELICASE MOT1 [Encephalitozoon cuniculi GB-M1] Length = 1256 Score = 43.5 bits (101), Expect = 0.019, Method: Compositional matrix adjust. Identities = 40/148 (27%), Positives = 62/148 (41%), Gaps = 31/148 (20%) Query: 55 KIKALEVIIEKANA----APIIVAYHFNSDL---------------ARLQKAFPQG-RTL 94 K+KALE II + I++ + F S + +RL + P RT Sbjct: 1084 KVKALEDIISLCGGEDLGSKILIFFQFKSTIDLVIKDIMKKYKFKYSRLDGSVPSAART- 1142 Query: 95 DKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 +E+N G +LF G GLNL ++++ W + Q M Sbjct: 1143 ----KIAEEFNTGTTQMLFLTTQVGGLGLNLTGADTVVMYEHDWNPFNDLQAM------D 1192 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQ 182 R + G KR V V+ IA+NT++E V+ Sbjct: 1193 RAHRIGQKRTVNVFRFIARNTLEEKVMN 1220 >gi|146297575|ref|YP_001181346.1| helicase domain-containing protein [Caldicellulosiruptor saccharolyticus DSM 8903] gi|145411151|gb|ABP68155.1| helicase domain protein [Caldicellulosiruptor saccharolyticus DSM 8903] Length = 177 Score = 43.5 bits (101), Expect = 0.019, Method: Compositional matrix adjust. Identities = 24/97 (24%), Positives = 51/97 (52%), Gaps = 6/97 (6%) Query: 101 IQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 + +N G+ + + G GLNL G ++++ + LWW+ +E + R + G Sbjct: 68 VNRFNGGEKQVFLVSLKAGGFGLNLT-GADVVILYDLWWN-----PAVENQAMDRAHRIG 121 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + +V V+ LI +NTI+E + + + K + D ++++ Sbjct: 122 QENSVQVFRLITKNTIEERIFELQQKKKDLFDQVVSS 158 >gi|70954393|ref|XP_746245.1| DNA helicase [Plasmodium chabaudi chabaudi] gi|56526791|emb|CAH81164.1| DNA helicase, putative [Plasmodium chabaudi chabaudi] Length = 1024 Score = 43.5 bits (101), Expect = 0.020, Method: Compositional matrix adjust. Identities = 30/103 (29%), Positives = 49/103 (47%), Gaps = 6/103 (5%) Query: 95 DKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 D + + QE + + + S G GLNLQ +++F S D HQ + + Sbjct: 770 DINDLSNQELDTDEAMIFILSTRSGGLGLNLQAADTVIIFDS---DFNPHQDI---QAMC 823 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 R + G K V V+ I ++++ELV QR + K I D ++ A Sbjct: 824 RCHRIGQKNVVKVFRFITLSSVEELVFQRAKDKLNINDKVIQA 866 >gi|318059790|ref|ZP_07978513.1| SNF2-like protein [Streptomyces sp. SA3_actG] gi|318075191|ref|ZP_07982523.1| SNF2-like protein [Streptomyces sp. SA3_actF] Length = 951 Score = 43.1 bits (100), Expect = 0.020, Method: Composition-based stats. Identities = 24/95 (25%), Positives = 47/95 (49%), Gaps = 6/95 (6%) Query: 101 IQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 ++ + +G++P+ + G GLNL ++ V + WW+ +E R + G Sbjct: 838 VRRFQDGEVPVFLLSLKAAGTGLNLTRADHV-VHYDRWWN-----PAVEAQATDRAHRIG 891 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 R V V+ LIA+ TI++ + + +K + D +L Sbjct: 892 QTRPVQVHRLIAEGTIEDRIAALMESKRELADAVL 926 >gi|302523347|ref|ZP_07275689.1| SNF2/RAD54 family helicase [Streptomyces sp. SPB78] gi|302432242|gb|EFL04058.1| SNF2/RAD54 family helicase [Streptomyces sp. SPB78] Length = 968 Score = 43.1 bits (100), Expect = 0.020, Method: Composition-based stats. Identities = 24/95 (25%), Positives = 47/95 (49%), Gaps = 6/95 (6%) Query: 101 IQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 ++ + +G++P+ + G GLNL ++ V + WW+ +E R + G Sbjct: 855 VRRFQDGEVPVFLLSLKAAGTGLNLTRADHV-VHYDRWWN-----PAVEAQATDRAHRIG 908 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 R V V+ LIA+ TI++ + + +K + D +L Sbjct: 909 QTRPVQVHRLIAEGTIEDRIAALMESKRELADAVL 943 >gi|302883714|ref|XP_003040756.1| DNA repair protein, SNF2 family [Nectria haematococca mpVI 77-13-4] gi|256721646|gb|EEU35043.1| DNA repair protein, SNF2 family [Nectria haematococca mpVI 77-13-4] Length = 805 Score = 43.1 bits (100), Expect = 0.020, Method: Compositional matrix adjust. Identities = 26/78 (33%), Positives = 40/78 (51%), Gaps = 6/78 (7%) Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 G G+NL G N LV F W+ QQ + R+ + G K+ FVY IA TI+E Sbjct: 643 GCGINL-IGANRLVLFDPDWNPAADQQALARVW-----RDGQKKDCFVYRFIATGTIEEK 696 Query: 180 VLQRLRTKSTIQDLLLNA 197 + QR K ++ ++++ Sbjct: 697 IFQRQSHKQSLSSCVVDS 714 >gi|326774662|ref|ZP_08233927.1| SNF2-related protein [Streptomyces cf. griseus XylebKG-1] gi|326654995|gb|EGE39841.1| SNF2-related protein [Streptomyces cf. griseus XylebKG-1] Length = 1039 Score = 43.1 bits (100), Expect = 0.020, Method: Composition-based stats. Identities = 26/97 (26%), Positives = 46/97 (47%), Gaps = 6/97 (6%) Query: 101 IQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 + + G+ P+ + G GLNL G++ V F WW+ +E R + G Sbjct: 925 VNRFQSGEAPVFLLSLKAAGTGLNLTRAGHV-VHFDRWWN-----PAVEAQATDRAYRIG 978 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + V V+ LIA+ TI++ + + L K + D +L + Sbjct: 979 QTQPVQVHRLIAEGTIEDRIAEMLTRKQGLADAVLGS 1015 >gi|182434140|ref|YP_001821859.1| SNF2/RAD54 family helicase [Streptomyces griseus subsp. griseus NBRC 13350] gi|178462656|dbj|BAG17176.1| putative SNF2/RAD54 family helicase [Streptomyces griseus subsp. griseus NBRC 13350] Length = 1006 Score = 43.1 bits (100), Expect = 0.020, Method: Composition-based stats. Identities = 26/97 (26%), Positives = 46/97 (47%), Gaps = 6/97 (6%) Query: 101 IQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 + + G+ P+ + G GLNL G++ V F WW+ +E R + G Sbjct: 892 VNRFQSGEAPVFLLSLKAAGTGLNLTRAGHV-VHFDRWWN-----PAVEAQATDRAYRIG 945 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + V V+ LIA+ TI++ + + L K + D +L + Sbjct: 946 QTQPVQVHRLIAEGTIEDRIAEMLTRKQGLADAVLGS 982 >gi|29828134|ref|NP_822768.1| SNF2/RAD54 family helicase [Streptomyces avermitilis MA-4680] gi|29605236|dbj|BAC69303.1| putative SNF2/RAD54 family helicase [Streptomyces avermitilis MA-4680] Length = 979 Score = 43.1 bits (100), Expect = 0.020, Method: Composition-based stats. Identities = 27/107 (25%), Positives = 49/107 (45%), Gaps = 6/107 (5%) Query: 91 GRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 G + + + + EG++P+ + G GLNL ++ V + WW+ +E Sbjct: 855 GTPVHEREAMVHRFQEGEVPVFLLSLKAAGTGLNLTRAEHV-VHYDRWWN-----PAVEA 908 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 R + G R V V+ LIA+ TI++ + L K + D +L + Sbjct: 909 QATDRAYRIGQTRPVQVHRLIAEGTIEDRIADMLLRKRELADAVLGS 955 >gi|322707957|gb|EFY99534.1| recombinational repair protein [Metarhizium anisopliae ARSEF 23] Length = 807 Score = 43.1 bits (100), Expect = 0.020, Method: Compositional matrix adjust. Identities = 26/78 (33%), Positives = 40/78 (51%), Gaps = 6/78 (7%) Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 G G+NL G N LV F W+ QQ + R+ + G K+ FVY IA TI+E Sbjct: 645 GCGINL-IGANRLVLFDPDWNPAADQQALARVW-----RDGQKKDCFVYRFIATGTIEEK 698 Query: 180 VLQRLRTKSTIQDLLLNA 197 + QR K ++ ++++ Sbjct: 699 IFQRQSHKQSLSSCVVDS 716 >gi|255555479|ref|XP_002518776.1| DNA repair and recombination protein RAD54B, putative [Ricinus communis] gi|223542157|gb|EEF43701.1| DNA repair and recombination protein RAD54B, putative [Ricinus communis] Length = 940 Score = 43.1 bits (100), Expect = 0.020, Method: Compositional matrix adjust. Identities = 29/84 (34%), Positives = 43/84 (51%), Gaps = 6/84 (7%) Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 G GLNL GGN LV F W+ +Q RI + G K+ V++Y ++ TI+E Sbjct: 625 GCGLNL-IGGNRLVLFDPDWNPANDKQAAARIW-----RDGQKKRVYIYRFLSTGTIEEK 678 Query: 180 VLQRLRTKSTIQDLLLNALKKETI 203 V QR +K +Q ++ + TI Sbjct: 679 VYQRQMSKEGLQKVIQHEQNDSTI 702 >gi|37590263|gb|AAH59235.1| Ino80 protein [Mus musculus] Length = 1088 Score = 43.1 bits (100), Expect = 0.020, Method: Compositional matrix adjust. Identities = 29/88 (32%), Positives = 46/88 (52%), Gaps = 12/88 (13%) Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQM--IERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 G G+NL ++ + S W + Q M R+G T+Q V VY LI + TI+ Sbjct: 712 GLGINLTAADTVIFYDSDWNPTVDQQAMDRAHRLGQTKQ--------VTVYRLICKGTIE 763 Query: 178 ELVLQRLRTKSTIQDLLLNA--LKKETI 203 E +LQR + KS IQ ++++ K +T+ Sbjct: 764 ERILQRAKEKSEIQRMVISGGNFKPDTL 791 >gi|300313869|ref|YP_003777961.1| superfamily II helicase [Herbaspirillum seropedicae SmR1] gi|300076654|gb|ADJ66053.1| superfamily II helicase protein [Herbaspirillum seropedicae SmR1] Length = 829 Score = 43.1 bits (100), Expect = 0.021, Method: Composition-based stats. Identities = 26/95 (27%), Positives = 47/95 (49%), Gaps = 6/95 (6%) Query: 101 IQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 I + + + PL+ + G GLNL + +V WW+ +E + R + G Sbjct: 709 IAGFQQEQTPLMLVSLKAGGVGLNLT-AADTVVLVDPWWN-----PAVEEQAIARAHRLG 762 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 +R VFVY L+ + +I+E +L+ KS + + +L Sbjct: 763 QQRQVFVYKLVIEGSIEERLLELQARKSALAEGML 797 >gi|150865881|ref|XP_001385272.2| helicase [Scheffersomyces stipitis CBS 6054] gi|149387137|gb|ABN67243.2| helicase [Scheffersomyces stipitis CBS 6054] Length = 809 Score = 43.1 bits (100), Expect = 0.021, Method: Composition-based stats. Identities = 30/105 (28%), Positives = 47/105 (44%), Gaps = 6/105 (5%) Query: 101 IQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 + ++N+ I + S G GLNL G + L+ F W+ Q + RI + G Sbjct: 575 VNQFNKSNINVFLLSSKSGGMGLNL-VGASRLILFDNDWNPSVDLQSMSRI-----HRDG 628 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIHV 205 R F+Y ++ TIDE + QR KS + L+ + T V Sbjct: 629 QTRPCFIYRILTTGTIDEKIFQRQLMKSKLSSKFLDNESQSTSDV 673 >gi|75759628|ref|ZP_00739713.1| SWF/SNF family helicase [Bacillus thuringiensis serovar israelensis ATCC 35646] gi|74492873|gb|EAO56004.1| SWF/SNF family helicase [Bacillus thuringiensis serovar israelensis ATCC 35646] Length = 168 Score = 43.1 bits (100), Expect = 0.021, Method: Compositional matrix adjust. Identities = 26/75 (34%), Positives = 37/75 (49%), Gaps = 6/75 (8%) Query: 104 WNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKR 163 +NEG+ L + G GLNL G + ++ + LWW+ QQ R + G K Sbjct: 62 FNEGEGELFLISLKAGGTGLNL-TGADTVILYDLWWNPAVEQQ-----AADRAYRMGQKN 115 Query: 164 AVFVYYLIAQNTIDE 178 V V L+AQ TI+E Sbjct: 116 TVQVIKLVAQGTIEE 130 >gi|322706938|gb|EFY98517.1| chromo domain-containing protein 1 [Metarhizium anisopliae ARSEF 23] Length = 1668 Score = 43.1 bits (100), Expect = 0.021, Method: Compositional matrix adjust. Identities = 25/80 (31%), Positives = 42/80 (52%), Gaps = 6/80 (7%) Query: 118 SCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 + G G+NL +++F S W + Q M R + G KR V +Y L+++ T++ Sbjct: 856 AGGLGINLMTADTVIIFDSDWNPQADLQAM------ARAHRIGQKRPVNIYRLVSKETVE 909 Query: 178 ELVLQRLRTKSTIQDLLLNA 197 E VL+R R K ++ L + A Sbjct: 910 EEVLERARNKLLLEYLTIQA 929 >gi|329940611|ref|ZP_08289892.1| helicase [Streptomyces griseoaurantiacus M045] gi|329300672|gb|EGG44569.1| helicase [Streptomyces griseoaurantiacus M045] Length = 940 Score = 43.1 bits (100), Expect = 0.021, Method: Composition-based stats. Identities = 26/97 (26%), Positives = 45/97 (46%), Gaps = 6/97 (6%) Query: 101 IQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 + + EG P+L + G GLNL G++ V WW+ +E R + G Sbjct: 826 VDRFQEGATPVLVLSLKAAGTGLNLTRAGHV-VHVDRWWN-----PAVEEQATDRAYRIG 879 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + V V+ LI + T+++ + LR K + D +L + Sbjct: 880 QTQPVQVHRLITEGTVEDRIDDMLRAKRALADAILGS 916 >gi|322701089|gb|EFY92840.1| chromo domain-containing protein 1 [Metarhizium acridum CQMa 102] Length = 1663 Score = 43.1 bits (100), Expect = 0.021, Method: Compositional matrix adjust. Identities = 25/80 (31%), Positives = 42/80 (52%), Gaps = 6/80 (7%) Query: 118 SCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 + G G+NL +++F S W + Q M R + G KR V +Y L+++ T++ Sbjct: 868 AGGLGINLMTADTVIIFDSDWNPQADLQAM------ARAHRIGQKRPVNIYRLVSKETVE 921 Query: 178 ELVLQRLRTKSTIQDLLLNA 197 E VL+R R K ++ L + A Sbjct: 922 EEVLERARNKLLLEYLTIQA 941 >gi|297190045|ref|ZP_06907443.1| helicase [Streptomyces pristinaespiralis ATCC 25486] gi|297150349|gb|EFH30576.1| helicase [Streptomyces pristinaespiralis ATCC 25486] Length = 700 Score = 43.1 bits (100), Expect = 0.021, Method: Composition-based stats. Identities = 26/97 (26%), Positives = 46/97 (47%), Gaps = 6/97 (6%) Query: 101 IQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 + + G++P+ + G GLNL ++ V + WW+ +E R + G Sbjct: 586 VNRFQNGEVPVFLLSLKAAGTGLNLTRAEHV-VHYDRWWN-----PAVEAQATDRAYRIG 639 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 R V V+ LIA+ TI++ + + L K + D +L A Sbjct: 640 QDRPVQVHRLIAEGTIEDRIARMLERKKDLADSVLGA 676 >gi|46127169|ref|XP_388138.1| hypothetical protein FG07962.1 [Gibberella zeae PH-1] Length = 856 Score = 43.1 bits (100), Expect = 0.022, Method: Compositional matrix adjust. Identities = 26/78 (33%), Positives = 40/78 (51%), Gaps = 6/78 (7%) Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 G G+NL G N LV F W+ QQ + R+ + G K+ FVY IA TI+E Sbjct: 694 GCGINL-IGANRLVLFDPDWNPAADQQALARVW-----RDGQKKDCFVYRFIATGTIEEK 747 Query: 180 VLQRLRTKSTIQDLLLNA 197 + QR K ++ ++++ Sbjct: 748 IFQRQSHKQSLSSCVVDS 765 >gi|194899988|ref|XP_001979539.1| GG15997 [Drosophila erecta] gi|190651242|gb|EDV48497.1| GG15997 [Drosophila erecta] Length = 232 Score = 43.1 bits (100), Expect = 0.022, Method: Compositional matrix adjust. Identities = 24/70 (34%), Positives = 40/70 (57%), Gaps = 11/70 (15%) Query: 131 ILVFFSLWWDLEEHQQMIER---IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTK 187 +++F+ W+ QQ ++R +G T+Q V VY LI + TI+E +LQR R K Sbjct: 1 MVIFYDSDWNPTVDQQAMDRAHRLGQTKQ--------VTVYRLICKGTIEERILQRAREK 52 Query: 188 STIQDLLLNA 197 S IQ ++++ Sbjct: 53 SEIQRMVISG 62 >gi|46125449|ref|XP_387278.1| hypothetical protein FG07102.1 [Gibberella zeae PH-1] Length = 1627 Score = 43.1 bits (100), Expect = 0.022, Method: Compositional matrix adjust. Identities = 25/80 (31%), Positives = 42/80 (52%), Gaps = 6/80 (7%) Query: 118 SCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 + G G+NL +++F S W + Q M R + G KR V +Y L+++ T++ Sbjct: 841 AGGLGINLMTADTVIIFDSDWNPQADLQAM------ARAHRIGQKRPVNIYRLVSKETVE 894 Query: 178 ELVLQRLRTKSTIQDLLLNA 197 E VL+R R K ++ L + A Sbjct: 895 EEVLERARNKLLLEYLTIQA 914 >gi|257081744|ref|ZP_05576105.1| Snf2 family protein [Enterococcus faecalis E1Sol] gi|256989774|gb|EEU77076.1| Snf2 family protein [Enterococcus faecalis E1Sol] Length = 1065 Score = 43.1 bits (100), Expect = 0.023, Method: Compositional matrix adjust. Identities = 32/128 (25%), Positives = 59/128 (46%), Gaps = 16/128 (12%) Query: 61 VIIEKANAAPIIVAYHFNSDLARLQKA---------FPQGRTLDKDPCTI-QEWNEGKIP 110 ++ K N +++ F S L+ L+K + +G T +D T+ +NEG+ Sbjct: 904 LVAAKENNRRVLLFSQFTSMLSILEKELNELGLETFYLRGSTKPQDRLTMANAFNEGEKD 963 Query: 111 LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYL 170 + + G GLNL + + + LWW+ +E R + G K+ V V+ + Sbjct: 964 VFLISLKAGGTGLNLTGADTV-ILYDLWWN-----PAVEEQAAGRAHRMGQKKVVEVWRM 1017 Query: 171 IAQNTIDE 178 IA+ T++E Sbjct: 1018 IAEGTVEE 1025 >gi|315148655|gb|EFT92671.1| protein, SNF2 family [Enterococcus faecalis TX4244] Length = 1065 Score = 43.1 bits (100), Expect = 0.023, Method: Compositional matrix adjust. Identities = 32/128 (25%), Positives = 59/128 (46%), Gaps = 16/128 (12%) Query: 61 VIIEKANAAPIIVAYHFNSDLARLQKA---------FPQGRTLDKDPCTI-QEWNEGKIP 110 ++ K N +++ F S L+ L+K + +G T +D T+ +NEG+ Sbjct: 904 LVAAKENNRRVLLFSQFTSMLSILEKELNELGLETFYLRGSTKPQDRLTMANAFNEGEKD 963 Query: 111 LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYL 170 + + G GLNL + + + LWW+ +E R + G K+ V V+ + Sbjct: 964 VFLISLKAGGTGLNLTGADTV-ILYDLWWN-----PAVEEQAAGRAHRMGQKKVVEVWRM 1017 Query: 171 IAQNTIDE 178 IA+ T++E Sbjct: 1018 IAEGTVEE 1025 >gi|126277710|ref|XP_001370967.1| PREDICTED: similar to INO80 complex homolog 1 [Monodelphis domestica] Length = 1558 Score = 43.1 bits (100), Expect = 0.023, Method: Compositional matrix adjust. Identities = 29/95 (30%), Positives = 45/95 (47%), Gaps = 10/95 (10%) Query: 105 NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQM--IERIGVTRQRQAGFK 162 N I + + G G+NL ++ + S W + Q M R+G T+Q Sbjct: 1167 NRNDIFVFLLSTRAGGLGINLTAADTVIFYDSDWNPTVDQQAMDRAHRLGQTKQ------ 1220 Query: 163 RAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 V VY LI + TI+E +LQR KS IQ ++++ Sbjct: 1221 --VTVYRLICKGTIEERILQRANEKSEIQQMVISG 1253 >gi|327535910|gb|AEA94744.1| Snf2 family protein [Enterococcus faecalis OG1RF] Length = 1065 Score = 43.1 bits (100), Expect = 0.023, Method: Compositional matrix adjust. Identities = 32/128 (25%), Positives = 59/128 (46%), Gaps = 16/128 (12%) Query: 61 VIIEKANAAPIIVAYHFNSDLARLQKA---------FPQGRTLDKDPCTI-QEWNEGKIP 110 ++ K N +++ F S L+ L+K + +G T +D T+ +NEG+ Sbjct: 904 LVAAKENNRRVLLFSQFTSMLSILEKELNELGLETFYLRGSTKPQDRLTMANAFNEGEKD 963 Query: 111 LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYL 170 + + G GLNL + + + LWW+ +E R + G K+ V V+ + Sbjct: 964 VFLISLKAGGTGLNLTGADTV-ILYDLWWN-----PAVEEQAAGRAHRMGQKKVVEVWRM 1017 Query: 171 IAQNTIDE 178 IA+ T++E Sbjct: 1018 IAEGTVEE 1025 >gi|315162049|gb|EFU06066.1| protein, SNF2 family [Enterococcus faecalis TX0645] Length = 1065 Score = 43.1 bits (100), Expect = 0.023, Method: Compositional matrix adjust. Identities = 32/128 (25%), Positives = 59/128 (46%), Gaps = 16/128 (12%) Query: 61 VIIEKANAAPIIVAYHFNSDLARLQKA---------FPQGRTLDKDPCTI-QEWNEGKIP 110 ++ K N +++ F S L+ L+K + +G T +D T+ +NEG+ Sbjct: 904 LVAAKENNRRVLLFSQFTSMLSILEKELNELGLETFYLRGSTKPQDRLTMANAFNEGEKD 963 Query: 111 LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYL 170 + + G GLNL + + + LWW+ +E R + G K+ V V+ + Sbjct: 964 VFLISLKAGGTGLNLTGADTV-ILYDLWWN-----PAVEEQAAGRAHRMGQKKVVEVWRM 1017 Query: 171 IAQNTIDE 178 IA+ T++E Sbjct: 1018 IAEGTVEE 1025 >gi|304310231|ref|YP_003809829.1| predicted helicase [gamma proteobacterium HdN1] gi|301795964|emb|CBL44165.1| predicted helicase [gamma proteobacterium HdN1] Length = 990 Score = 43.1 bits (100), Expect = 0.023, Method: Compositional matrix adjust. Identities = 39/154 (25%), Positives = 68/154 (44%), Gaps = 18/154 (11%) Query: 53 DEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQ---------GRTLDKDPCTIQE 103 D + LE ++E+ I+V F S LA +++A Q G T ++ ++ Sbjct: 809 DHLLVMLEELVEEGRR--ILVFSQFTSMLALIREALQQRKIPHLLLTGATQNRQ-ALVER 865 Query: 104 WNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKR 163 + P+ + G GLNL + ++ F WW+ +Q +R + G + Sbjct: 866 FQAENEPIFLISLKAGGVGLNLT-AADTVIHFDPWWNPAAEEQATDRA-----YRIGQDK 919 Query: 164 AVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 VFVY LI + TI+E ++ K +QD + A Sbjct: 920 PVFVYKLICEGTIEEKIVLLQERKRALQDAITGA 953 >gi|257420085|ref|ZP_05597079.1| conserved hypothetical protein [Enterococcus faecalis T11] gi|257161913|gb|EEU91873.1| conserved hypothetical protein [Enterococcus faecalis T11] Length = 1065 Score = 43.1 bits (100), Expect = 0.023, Method: Compositional matrix adjust. Identities = 32/128 (25%), Positives = 59/128 (46%), Gaps = 16/128 (12%) Query: 61 VIIEKANAAPIIVAYHFNSDLARLQKA---------FPQGRTLDKDPCTI-QEWNEGKIP 110 ++ K N +++ F S L+ L+K + +G T +D T+ +NEG+ Sbjct: 904 LVAAKENNRRVLLFSQFTSMLSILEKELNELGLETFYLRGSTKPQDRLTMANAFNEGEKD 963 Query: 111 LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYL 170 + + G GLNL + + + LWW+ +E R + G K+ V V+ + Sbjct: 964 VFLISLKAGGTGLNLTGADTV-ILYDLWWN-----PAVEEQAAGRAHRMGQKKVVEVWRM 1017 Query: 171 IAQNTIDE 178 IA+ T++E Sbjct: 1018 IAEGTVEE 1025 >gi|229549191|ref|ZP_04437916.1| Snf2 family helicase [Enterococcus faecalis ATCC 29200] gi|229305428|gb|EEN71424.1| Snf2 family helicase [Enterococcus faecalis ATCC 29200] Length = 1065 Score = 43.1 bits (100), Expect = 0.023, Method: Compositional matrix adjust. Identities = 32/128 (25%), Positives = 59/128 (46%), Gaps = 16/128 (12%) Query: 61 VIIEKANAAPIIVAYHFNSDLARLQKA---------FPQGRTLDKDPCTI-QEWNEGKIP 110 ++ K N +++ F S L+ L+K + +G T +D T+ +NEG+ Sbjct: 904 LVAAKENNRRVLLFSQFTSMLSILEKELNELGLETFYLRGSTKPQDRLTMANAFNEGEKD 963 Query: 111 LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYL 170 + + G GLNL + + + LWW+ +E R + G K+ V V+ + Sbjct: 964 VFLISLKAGGTGLNLTGADTV-ILYDLWWN-----PAVEEQAAGRAHRMGQKKVVEVWRM 1017 Query: 171 IAQNTIDE 178 IA+ T++E Sbjct: 1018 IAEGTVEE 1025 >gi|322701898|gb|EFY93646.1| recombinational repair protein [Metarhizium acridum CQMa 102] Length = 819 Score = 43.1 bits (100), Expect = 0.023, Method: Compositional matrix adjust. Identities = 26/78 (33%), Positives = 40/78 (51%), Gaps = 6/78 (7%) Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 G G+NL G N LV F W+ QQ + R+ + G K+ FVY IA TI+E Sbjct: 599 GCGINL-IGANRLVLFDPDWNPAADQQALARVW-----RDGQKKDCFVYRFIATGTIEEK 652 Query: 180 VLQRLRTKSTIQDLLLNA 197 + QR K ++ ++++ Sbjct: 653 IFQRQSHKQSLSSCVVDS 670 >gi|257087662|ref|ZP_05582023.1| Snf2 family protein [Enterococcus faecalis D6] gi|300861266|ref|ZP_07107353.1| SNF2 family N-terminal domain protein [Enterococcus faecalis TUSoD Ef11] gi|307288690|ref|ZP_07568670.1| protein, SNF2 family [Enterococcus faecalis TX0109] gi|256995692|gb|EEU82994.1| Snf2 family protein [Enterococcus faecalis D6] gi|300850305|gb|EFK78055.1| SNF2 family N-terminal domain protein [Enterococcus faecalis TUSoD Ef11] gi|306500356|gb|EFM69693.1| protein, SNF2 family [Enterococcus faecalis TX0109] gi|315025539|gb|EFT37471.1| protein, SNF2 family [Enterococcus faecalis TX2137] gi|315035196|gb|EFT47128.1| protein, SNF2 family [Enterococcus faecalis TX0027] gi|315165356|gb|EFU09373.1| protein, SNF2 family [Enterococcus faecalis TX1302] Length = 1065 Score = 43.1 bits (100), Expect = 0.023, Method: Compositional matrix adjust. Identities = 32/128 (25%), Positives = 59/128 (46%), Gaps = 16/128 (12%) Query: 61 VIIEKANAAPIIVAYHFNSDLARLQKA---------FPQGRTLDKDPCTI-QEWNEGKIP 110 ++ K N +++ F S L+ L+K + +G T +D T+ +NEG+ Sbjct: 904 LVAAKENNRRVLLFSQFTSMLSILEKELNELGLETFYLRGSTKPQDRLTMANAFNEGEKD 963 Query: 111 LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYL 170 + + G GLNL + + + LWW+ +E R + G K+ V V+ + Sbjct: 964 VFLISLKAGGTGLNLTGADTV-ILYDLWWN-----PAVEEQAAGRAHRMGQKKVVEVWRM 1017 Query: 171 IAQNTIDE 178 IA+ T++E Sbjct: 1018 IAEGTVEE 1025 >gi|315168675|gb|EFU12692.1| protein, SNF2 family [Enterococcus faecalis TX1341] Length = 1065 Score = 43.1 bits (100), Expect = 0.024, Method: Compositional matrix adjust. Identities = 32/128 (25%), Positives = 59/128 (46%), Gaps = 16/128 (12%) Query: 61 VIIEKANAAPIIVAYHFNSDLARLQKA---------FPQGRTLDKDPCTI-QEWNEGKIP 110 ++ K N +++ F S L+ L+K + +G T +D T+ +NEG+ Sbjct: 904 LVAAKENNRRVLLFSQFTSMLSILEKELNELGLETFYLRGSTKPQDRLTMANAFNEGEKD 963 Query: 111 LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYL 170 + + G GLNL + + + LWW+ +E R + G K+ V V+ + Sbjct: 964 VFLISLKAGGTGLNLTGADTV-ILYDLWWN-----PAVEEQAAGRAHRMGQKKVVEVWRM 1017 Query: 171 IAQNTIDE 178 IA+ T++E Sbjct: 1018 IAEGTVEE 1025 >gi|255971908|ref|ZP_05422494.1| conserved hypothetical protein [Enterococcus faecalis T1] gi|312953715|ref|ZP_07772550.1| protein, SNF2 family [Enterococcus faecalis TX0102] gi|255962926|gb|EET95402.1| conserved hypothetical protein [Enterococcus faecalis T1] gi|295113640|emb|CBL32277.1| Superfamily II DNA/RNA helicases, SNF2 family [Enterococcus sp. 7L76] gi|310628362|gb|EFQ11645.1| protein, SNF2 family [Enterococcus faecalis TX0102] gi|315149934|gb|EFT93950.1| protein, SNF2 family [Enterococcus faecalis TX0012] gi|315151814|gb|EFT95830.1| protein, SNF2 family [Enterococcus faecalis TX0031] gi|315159334|gb|EFU03351.1| protein, SNF2 family [Enterococcus faecalis TX0312] gi|323481616|gb|ADX81055.1| SNF2-type helicase [Enterococcus faecalis 62] Length = 1065 Score = 43.1 bits (100), Expect = 0.024, Method: Compositional matrix adjust. Identities = 32/128 (25%), Positives = 59/128 (46%), Gaps = 16/128 (12%) Query: 61 VIIEKANAAPIIVAYHFNSDLARLQKA---------FPQGRTLDKDPCTI-QEWNEGKIP 110 ++ K N +++ F S L+ L+K + +G T +D T+ +NEG+ Sbjct: 904 LVAAKENNRRVLLFSQFTSMLSILEKELNELGLETFYLRGSTKPQDRLTMANAFNEGEKD 963 Query: 111 LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYL 170 + + G GLNL + + + LWW+ +E R + G K+ V V+ + Sbjct: 964 VFLISLKAGGTGLNLTGADTV-ILYDLWWN-----PAVEEQAAGRAHRMGQKKVVEVWRM 1017 Query: 171 IAQNTIDE 178 IA+ T++E Sbjct: 1018 IAEGTVEE 1025 >gi|85860994|ref|YP_463196.1| swf/snf family helicase [Syntrophus aciditrophicus SB] gi|85724085|gb|ABC79028.1| swf/snf family helicase [Syntrophus aciditrophicus SB] Length = 1407 Score = 43.1 bits (100), Expect = 0.024, Method: Compositional matrix adjust. Identities = 28/97 (28%), Positives = 46/97 (47%), Gaps = 6/97 (6%) Query: 101 IQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 ++ + GK L + G GLNL + ++ WW+ +E R + G Sbjct: 1298 VEAFQAGKGSLFLISLRAGGVGLNLT-AADFVIHMDPWWN-----PAVEDQASDRAHRIG 1351 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 KR V VY L+ +NTI+E +L+ +K + D LL+ Sbjct: 1352 QKRPVTVYRLVTKNTIEEKILKLHASKRDLADSLLDG 1388 >gi|256957920|ref|ZP_05562091.1| Snf2 family protein [Enterococcus faecalis DS5] gi|256948416|gb|EEU65048.1| Snf2 family protein [Enterococcus faecalis DS5] Length = 1065 Score = 43.1 bits (100), Expect = 0.024, Method: Compositional matrix adjust. Identities = 32/128 (25%), Positives = 59/128 (46%), Gaps = 16/128 (12%) Query: 61 VIIEKANAAPIIVAYHFNSDLARLQKA---------FPQGRTLDKDPCTI-QEWNEGKIP 110 ++ K N +++ F S L+ L+K + +G T +D T+ +NEG+ Sbjct: 904 LVAAKENNRRVLLFSQFTSMLSILEKELNELGLETFYLRGSTKPQDRLTMANAFNEGEKD 963 Query: 111 LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYL 170 + + G GLNL + + + LWW+ +E R + G K+ V V+ + Sbjct: 964 VFLISLKAGGTGLNLTGADTV-ILYDLWWN-----PAVEEQAAGRAHRMGQKKVVEVWRM 1017 Query: 171 IAQNTIDE 178 IA+ T++E Sbjct: 1018 IAEGTVEE 1025 >gi|255974902|ref|ZP_05425488.1| Snf2 family protein [Enterococcus faecalis T2] gi|307278760|ref|ZP_07559826.1| protein, SNF2 family [Enterococcus faecalis TX0860] gi|255967774|gb|EET98396.1| Snf2 family protein [Enterococcus faecalis T2] gi|306504566|gb|EFM73770.1| protein, SNF2 family [Enterococcus faecalis TX0860] Length = 1065 Score = 43.1 bits (100), Expect = 0.024, Method: Compositional matrix adjust. Identities = 32/128 (25%), Positives = 59/128 (46%), Gaps = 16/128 (12%) Query: 61 VIIEKANAAPIIVAYHFNSDLARLQKA---------FPQGRTLDKDPCTI-QEWNEGKIP 110 ++ K N +++ F S L+ L+K + +G T +D T+ +NEG+ Sbjct: 904 LVAAKENNRRVLLFSQFTSMLSILEKELNELGLETFYLRGSTKPQDRLTMANAFNEGEKD 963 Query: 111 LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYL 170 + + G GLNL + + + LWW+ +E R + G K+ V V+ + Sbjct: 964 VFLISLKAGGTGLNLTGADTV-ILYDLWWN-----PAVEEQAAGRAHRMGQKKVVEVWRM 1017 Query: 171 IAQNTIDE 178 IA+ T++E Sbjct: 1018 IAEGTVEE 1025 >gi|148696004|gb|EDL27951.1| INO80 complex homolog 1 (S. cerevisiae) [Mus musculus] Length = 1032 Score = 43.1 bits (100), Expect = 0.024, Method: Compositional matrix adjust. Identities = 29/88 (32%), Positives = 46/88 (52%), Gaps = 12/88 (13%) Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQM--IERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 G G+NL ++ + S W + Q M R+G T+Q V VY LI + TI+ Sbjct: 656 GLGINLTAADTVIFYDSDWNPTVDQQAMDRAHRLGQTKQ--------VTVYRLICKGTIE 707 Query: 178 ELVLQRLRTKSTIQDLLLNA--LKKETI 203 E +LQR + KS IQ ++++ K +T+ Sbjct: 708 ERILQRAKEKSEIQRMVISGGNFKPDTL 735 >gi|315170383|gb|EFU14400.1| protein, SNF2 family [Enterococcus faecalis TX1342] Length = 1065 Score = 43.1 bits (100), Expect = 0.024, Method: Compositional matrix adjust. Identities = 32/128 (25%), Positives = 59/128 (46%), Gaps = 16/128 (12%) Query: 61 VIIEKANAAPIIVAYHFNSDLARLQKA---------FPQGRTLDKDPCTI-QEWNEGKIP 110 ++ K N +++ F S L+ L+K + +G T +D T+ +NEG+ Sbjct: 904 LVAAKENNRRVLLFSQFTSMLSILEKELNELGLETFYLRGSTKPQDRLTMANAFNEGEKD 963 Query: 111 LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYL 170 + + G GLNL + + + LWW+ +E R + G K+ V V+ + Sbjct: 964 VFLISLKAGGTGLNLTGADTV-ILYDLWWN-----PAVEEQAAGRAHRMGQKKVVEVWRM 1017 Query: 171 IAQNTIDE 178 IA+ T++E Sbjct: 1018 IAEGTVEE 1025 >gi|229544926|ref|ZP_04433651.1| Snf2 family helicase [Enterococcus faecalis TX1322] gi|229309818|gb|EEN75805.1| Snf2 family helicase [Enterococcus faecalis TX1322] Length = 1065 Score = 43.1 bits (100), Expect = 0.024, Method: Compositional matrix adjust. Identities = 32/128 (25%), Positives = 59/128 (46%), Gaps = 16/128 (12%) Query: 61 VIIEKANAAPIIVAYHFNSDLARLQKA---------FPQGRTLDKDPCTI-QEWNEGKIP 110 ++ K N +++ F S L+ L+K + +G T +D T+ +NEG+ Sbjct: 904 LVAAKENNRRVLLFSQFTSMLSILEKELNELGLETFYLRGSTKPQDRLTMANAFNEGEKD 963 Query: 111 LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYL 170 + + G GLNL + + + LWW+ +E R + G K+ V V+ + Sbjct: 964 VFLISLKAGGTGLNLTGADTV-ILYDLWWN-----PAVEEQAAGRAHRMGQKKVVEVWRM 1017 Query: 171 IAQNTIDE 178 IA+ T++E Sbjct: 1018 IAEGTVEE 1025 >gi|94986612|ref|YP_594545.1| SNF2 family DNA/RNA helicase [Lawsonia intracellularis PHE/MN1-00] gi|94730861|emb|CAJ54224.1| Superfamily II DNA/RNA helicases, SNF2 family [Lawsonia intracellularis PHE/MN1-00] Length = 1073 Score = 43.1 bits (100), Expect = 0.024, Method: Compositional matrix adjust. Identities = 25/91 (27%), Positives = 43/91 (47%), Gaps = 6/91 (6%) Query: 105 NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA 164 N +IP+ + G GLNL + ++ + WW+ +E R + G R Sbjct: 969 NTPEIPVFLISLKAGGTGLNLT-SADYVIHYDPWWN-----PAVESQATDRTHRIGQTRQ 1022 Query: 165 VFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 VF Y LI QNT++E +L+ K + + ++ Sbjct: 1023 VFSYKLICQNTVEEKILKLQEMKRGVAEAII 1053 >gi|257090879|ref|ZP_05585240.1| conserved hypothetical protein [Enterococcus faecalis CH188] gi|312902516|ref|ZP_07761722.1| protein, SNF2 family [Enterococcus faecalis TX0635] gi|256999691|gb|EEU86211.1| conserved hypothetical protein [Enterococcus faecalis CH188] gi|310634186|gb|EFQ17469.1| protein, SNF2 family [Enterococcus faecalis TX0635] gi|315579675|gb|EFU91866.1| protein, SNF2 family [Enterococcus faecalis TX0630] Length = 1065 Score = 43.1 bits (100), Expect = 0.024, Method: Compositional matrix adjust. Identities = 32/128 (25%), Positives = 59/128 (46%), Gaps = 16/128 (12%) Query: 61 VIIEKANAAPIIVAYHFNSDLARLQKA---------FPQGRTLDKDPCTI-QEWNEGKIP 110 ++ K N +++ F S L+ L+K + +G T +D T+ +NEG+ Sbjct: 904 LVAAKENNRRVLLFSQFTSMLSILEKELNELGLETFYLRGSTKPQDRLTMANAFNEGEKD 963 Query: 111 LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYL 170 + + G GLNL + + + LWW+ +E R + G K+ V V+ + Sbjct: 964 VFLISLKAGGTGLNLTGADTV-ILYDLWWN-----PAVEEQAAGRAHRMGQKKVVEVWRM 1017 Query: 171 IAQNTIDE 178 IA+ T++E Sbjct: 1018 IAEGTVEE 1025 >gi|256853990|ref|ZP_05559355.1| Snf2 family protein [Enterococcus faecalis T8] gi|307290304|ref|ZP_07570220.1| protein, SNF2 family [Enterococcus faecalis TX0411] gi|256710933|gb|EEU25976.1| Snf2 family protein [Enterococcus faecalis T8] gi|306498725|gb|EFM68226.1| protein, SNF2 family [Enterococcus faecalis TX0411] gi|315030488|gb|EFT42420.1| protein, SNF2 family [Enterococcus faecalis TX4000] Length = 1065 Score = 43.1 bits (100), Expect = 0.024, Method: Compositional matrix adjust. Identities = 32/128 (25%), Positives = 59/128 (46%), Gaps = 16/128 (12%) Query: 61 VIIEKANAAPIIVAYHFNSDLARLQKA---------FPQGRTLDKDPCTI-QEWNEGKIP 110 ++ K N +++ F S L+ L+K + +G T +D T+ +NEG+ Sbjct: 904 LVAAKENNRRVLLFSQFTSMLSILEKELNELGLETFYLRGSTKPQDRLTMANAFNEGEKD 963 Query: 111 LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYL 170 + + G GLNL + + + LWW+ +E R + G K+ V V+ + Sbjct: 964 VFLISLKAGGTGLNLTGADTV-ILYDLWWN-----PAVEEQAAGRAHRMGQKKVVEVWRM 1017 Query: 171 IAQNTIDE 178 IA+ T++E Sbjct: 1018 IAEGTVEE 1025 >gi|315174973|gb|EFU18990.1| protein, SNF2 family [Enterococcus faecalis TX1346] Length = 1065 Score = 43.1 bits (100), Expect = 0.025, Method: Compositional matrix adjust. Identities = 32/128 (25%), Positives = 59/128 (46%), Gaps = 16/128 (12%) Query: 61 VIIEKANAAPIIVAYHFNSDLARLQKA---------FPQGRTLDKDPCTI-QEWNEGKIP 110 ++ K N +++ F S L+ L+K + +G T +D T+ +NEG+ Sbjct: 904 LVAAKENNRRVLLFSQFTSMLSILEKELNELGLETFYLRGSTKPQDRLTMANAFNEGEKD 963 Query: 111 LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYL 170 + + G GLNL + + + LWW+ +E R + G K+ V V+ + Sbjct: 964 VFLISLKAGGTGLNLTGADTV-ILYDLWWN-----PAVEEQAAGRAHRMGQKKVVEVWRM 1017 Query: 171 IAQNTIDE 178 IA+ T++E Sbjct: 1018 IAEGTVEE 1025 >gi|257416863|ref|ZP_05593857.1| Snf2 family protein [Enterococcus faecalis AR01/DG] gi|257158691|gb|EEU88651.1| Snf2 family protein [Enterococcus faecalis ARO1/DG] Length = 1065 Score = 43.1 bits (100), Expect = 0.025, Method: Compositional matrix adjust. Identities = 32/128 (25%), Positives = 59/128 (46%), Gaps = 16/128 (12%) Query: 61 VIIEKANAAPIIVAYHFNSDLARLQKA---------FPQGRTLDKDPCTI-QEWNEGKIP 110 ++ K N +++ F S L+ L+K + +G T +D T+ +NEG+ Sbjct: 904 LVAAKENNRRVLLFSQFTSMLSILEKELNELGLETFYLRGSTKPQDRLTMANAFNEGEKD 963 Query: 111 LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYL 170 + + G GLNL + + + LWW+ +E R + G K+ V V+ + Sbjct: 964 VFLISLKAGGTGLNLTGADTV-ILYDLWWN-----PAVEEQAAGRAHRMGQKKVVEVWRM 1017 Query: 171 IAQNTIDE 178 IA+ T++E Sbjct: 1018 IAEGTVEE 1025 >gi|302915751|ref|XP_003051686.1| SNF2 family chromodomain-helicase DNA-binding protein [Nectria haematococca mpVI 77-13-4] gi|256732625|gb|EEU45973.1| SNF2 family chromodomain-helicase DNA-binding protein [Nectria haematococca mpVI 77-13-4] Length = 1557 Score = 43.1 bits (100), Expect = 0.025, Method: Compositional matrix adjust. Identities = 25/80 (31%), Positives = 42/80 (52%), Gaps = 6/80 (7%) Query: 118 SCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 + G G+NL +++F S W + Q M R + G KR V +Y L+++ T++ Sbjct: 847 AGGLGINLMTADTVVIFDSDWNPQADLQAM------ARAHRIGQKRPVNIYRLVSKETVE 900 Query: 178 ELVLQRLRTKSTIQDLLLNA 197 E VL+R R K ++ L + A Sbjct: 901 EEVLERARNKLLLEYLTIQA 920 >gi|261203723|ref|XP_002629075.1| dsDNA-dependent ATPase Rad54 [Ajellomyces dermatitidis SLH14081] gi|239586860|gb|EEQ69503.1| dsDNA-dependent ATPase Rad54 [Ajellomyces dermatitidis SLH14081] Length = 828 Score = 43.1 bits (100), Expect = 0.025, Method: Compositional matrix adjust. Identities = 26/78 (33%), Positives = 40/78 (51%), Gaps = 6/78 (7%) Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 G G+NL G N LV F W+ QQ + R+ + G K+ FVY IA TI+E Sbjct: 662 GCGINL-IGANRLVLFDPDWNPAADQQALARVW-----RDGQKKDCFVYRFIATGTIEEK 715 Query: 180 VLQRLRTKSTIQDLLLNA 197 + QR K ++ ++++ Sbjct: 716 IFQRQSHKQSLSSCVVDS 733 >gi|29377168|ref|NP_816322.1| Snf2 family protein [Enterococcus faecalis V583] gi|227554179|ref|ZP_03984226.1| Snf2 family helicase [Enterococcus faecalis HH22] gi|256763318|ref|ZP_05503898.1| Snf2 family protein [Enterococcus faecalis T3] gi|256963798|ref|ZP_05567969.1| Snf2 family protein [Enterococcus faecalis HIP11704] gi|257084340|ref|ZP_05578701.1| Snf2 family protein [Enterococcus faecalis Fly1] gi|257421693|ref|ZP_05598683.1| Snf2 family protein [Enterococcus faecalis X98] gi|307271745|ref|ZP_07553016.1| protein, SNF2 family [Enterococcus faecalis TX0855] gi|312900055|ref|ZP_07759372.1| protein, SNF2 family [Enterococcus faecalis TX0470] gi|29344634|gb|AAO82392.1| Snf2 family protein [Enterococcus faecalis V583] gi|227176678|gb|EEI57650.1| Snf2 family helicase [Enterococcus faecalis HH22] gi|256684569|gb|EEU24264.1| Snf2 family protein [Enterococcus faecalis T3] gi|256954294|gb|EEU70926.1| Snf2 family protein [Enterococcus faecalis HIP11704] gi|256992370|gb|EEU79672.1| Snf2 family protein [Enterococcus faecalis Fly1] gi|257163517|gb|EEU93477.1| Snf2 family protein [Enterococcus faecalis X98] gi|306511623|gb|EFM80622.1| protein, SNF2 family [Enterococcus faecalis TX0855] gi|311292812|gb|EFQ71368.1| protein, SNF2 family [Enterococcus faecalis TX0470] gi|315155557|gb|EFT99573.1| protein, SNF2 family [Enterococcus faecalis TX0043] gi|315573810|gb|EFU86001.1| protein, SNF2 family [Enterococcus faecalis TX0309B] gi|315580246|gb|EFU92437.1| protein, SNF2 family [Enterococcus faecalis TX0309A] Length = 1065 Score = 43.1 bits (100), Expect = 0.025, Method: Compositional matrix adjust. Identities = 32/128 (25%), Positives = 59/128 (46%), Gaps = 16/128 (12%) Query: 61 VIIEKANAAPIIVAYHFNSDLARLQKA---------FPQGRTLDKDPCTI-QEWNEGKIP 110 ++ K N +++ F S L+ L+K + +G T +D T+ +NEG+ Sbjct: 904 LVAAKENNRRVLLFSQFTSMLSILEKELNELGLETFYLRGSTKPQDRLTMANAFNEGEKD 963 Query: 111 LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYL 170 + + G GLNL + + + LWW+ +E R + G K+ V V+ + Sbjct: 964 VFLISLKAGGTGLNLTGADTV-ILYDLWWN-----PAVEEQAAGRAHRMGQKKVVEVWRM 1017 Query: 171 IAQNTIDE 178 IA+ T++E Sbjct: 1018 IAEGTVEE 1025 >gi|256616806|ref|ZP_05473652.1| Snf2 family protein [Enterococcus faecalis ATCC 4200] gi|256596333|gb|EEU15509.1| Snf2 family protein [Enterococcus faecalis ATCC 4200] Length = 1065 Score = 43.1 bits (100), Expect = 0.025, Method: Compositional matrix adjust. Identities = 32/128 (25%), Positives = 59/128 (46%), Gaps = 16/128 (12%) Query: 61 VIIEKANAAPIIVAYHFNSDLARLQKA---------FPQGRTLDKDPCTI-QEWNEGKIP 110 ++ K N +++ F S L+ L+K + +G T +D T+ +NEG+ Sbjct: 904 LVAAKENNRRVLLFSQFTSMLSILEKELNELGLETFYLRGSTKPQDRLTMANAFNEGEKD 963 Query: 111 LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYL 170 + + G GLNL + + + LWW+ +E R + G K+ V V+ + Sbjct: 964 VFLISLKAGGTGLNLTGADTV-ILYDLWWN-----PAVEEQAAGRAHRMGQKKVVEVWRM 1017 Query: 171 IAQNTIDE 178 IA+ T++E Sbjct: 1018 IAEGTVEE 1025 >gi|169600905|ref|XP_001793875.1| hypothetical protein SNOG_03305 [Phaeosphaeria nodorum SN15] gi|160705541|gb|EAT90036.2| hypothetical protein SNOG_03305 [Phaeosphaeria nodorum SN15] Length = 831 Score = 43.1 bits (100), Expect = 0.025, Method: Compositional matrix adjust. Identities = 31/101 (30%), Positives = 49/101 (48%), Gaps = 12/101 (11%) Query: 101 IQEWNEGKIP----LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 + ++N+ + P LL + CG LNL G N LV F W+ QQ + R+ Sbjct: 622 VDKFNDPEGPEFVFLLSSKAGGCG--LNL-IGANRLVLFDPDWNPAADQQALARVW---- 674 Query: 157 RQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + G K+ FVY I TI+E V QR K ++ ++++ Sbjct: 675 -RDGQKKDCFVYRFITTGTIEEKVFQRQSHKQSLSSCVVDS 714 >gi|149023010|gb|EDL79904.1| rCG26684 [Rattus norvegicus] Length = 1032 Score = 43.1 bits (100), Expect = 0.025, Method: Compositional matrix adjust. Identities = 29/88 (32%), Positives = 46/88 (52%), Gaps = 12/88 (13%) Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQM--IERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 G G+NL ++ + S W + Q M R+G T+Q V VY LI + TI+ Sbjct: 656 GLGINLTAADTVIFYDSDWNPTVDQQAMDRAHRLGQTKQ--------VTVYRLICKGTIE 707 Query: 178 ELVLQRLRTKSTIQDLLLNA--LKKETI 203 E +LQR + KS IQ ++++ K +T+ Sbjct: 708 ERILQRAKEKSEIQRMVISGGNFKPDTL 735 >gi|77361926|ref|YP_341500.1| DNA helicase [Pseudoalteromonas haloplanktis TAC125] gi|76876837|emb|CAI89054.1| putative DNA helicase with SNF2 domain [Pseudoalteromonas haloplanktis TAC125] Length = 1048 Score = 43.1 bits (100), Expect = 0.025, Method: Compositional matrix adjust. Identities = 29/105 (27%), Positives = 46/105 (43%), Gaps = 7/105 (6%) Query: 91 GRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 G+T +D I E+ G + + G GLNL + + + WW+ +E+ Sbjct: 930 GQTRQRDKV-IDEFTSGATSVFLISLKAGGTGLNLTQADTV-IHYDPWWN-----PAVEK 982 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 R + G VFVY LI N+I+E V + + K + D L Sbjct: 983 QATDRAYRIGQTNPVFVYKLIMANSIEEKVFKMQQDKQALVDALF 1027 >gi|257079857|ref|ZP_05574218.1| Snf2 family protein [Enterococcus faecalis JH1] gi|294780417|ref|ZP_06745783.1| SNF2 family N-terminal domain protein [Enterococcus faecalis PC1.1] gi|307269625|ref|ZP_07550961.1| protein, SNF2 family [Enterococcus faecalis TX4248] gi|256987887|gb|EEU75189.1| Snf2 family protein [Enterococcus faecalis JH1] gi|294452517|gb|EFG20953.1| SNF2 family N-terminal domain protein [Enterococcus faecalis PC1.1] gi|306514042|gb|EFM82627.1| protein, SNF2 family [Enterococcus faecalis TX4248] gi|329570678|gb|EGG52395.1| protein, SNF2 family [Enterococcus faecalis TX1467] Length = 1065 Score = 43.1 bits (100), Expect = 0.025, Method: Compositional matrix adjust. Identities = 32/128 (25%), Positives = 59/128 (46%), Gaps = 16/128 (12%) Query: 61 VIIEKANAAPIIVAYHFNSDLARLQKA---------FPQGRTLDKDPCTI-QEWNEGKIP 110 ++ K N +++ F S L+ L+K + +G T +D T+ +NEG+ Sbjct: 904 LVAAKENNRRVLLFSQFTSMLSILEKELNELGLETFYLRGSTKPQDRLTMANAFNEGEKD 963 Query: 111 LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYL 170 + + G GLNL + + + LWW+ +E R + G K+ V V+ + Sbjct: 964 VFLISLKAGGTGLNLTGADTV-ILYDLWWN-----PAVEEQAAGRAHRMGQKKVVEVWRM 1017 Query: 171 IAQNTIDE 178 IA+ T++E Sbjct: 1018 IAEGTVEE 1025 >gi|307276930|ref|ZP_07558040.1| protein, SNF2 family [Enterococcus faecalis TX2134] gi|306506353|gb|EFM75513.1| protein, SNF2 family [Enterococcus faecalis TX2134] gi|315143788|gb|EFT87804.1| protein, SNF2 family [Enterococcus faecalis TX2141] Length = 1065 Score = 43.1 bits (100), Expect = 0.025, Method: Compositional matrix adjust. Identities = 32/128 (25%), Positives = 59/128 (46%), Gaps = 16/128 (12%) Query: 61 VIIEKANAAPIIVAYHFNSDLARLQKA---------FPQGRTLDKDPCTI-QEWNEGKIP 110 ++ K N +++ F S L+ L+K + +G T +D T+ +NEG+ Sbjct: 904 LVAAKENNRRVLLFSQFTSMLSILEKELNELGLETFYLRGSTKPQDRLTMANAFNEGEKD 963 Query: 111 LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYL 170 + + G GLNL + + + LWW+ +E R + G K+ V V+ + Sbjct: 964 VFLISLKAGGTGLNLTGADTV-ILYDLWWN-----PAVEEQAAGRAHRMGQKKVVEVWRM 1017 Query: 171 IAQNTIDE 178 IA+ T++E Sbjct: 1018 IAEGTVEE 1025 >gi|320164602|gb|EFW41501.1| SNF2 family DNA-dependent ATPase [Capsaspora owczarzaki ATCC 30864] Length = 2139 Score = 42.7 bits (99), Expect = 0.026, Method: Composition-based stats. Identities = 37/124 (29%), Positives = 60/124 (48%), Gaps = 11/124 (8%) Query: 81 LARLQKAFPQ--GRTLDKD-PCTIQEWNEGKIPLL--FAHPASCGHGLNLQYGGNILVFF 135 L+ LQ F + G TL+ D I ++N P+ + G G+NL I++F Sbjct: 955 LSHLQMPFCRLDGSTLNTDRQHLIDKFNAPNSPIFCFLLSTRAGGLGINLHTADTIIMFD 1014 Query: 136 SLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 S D H M ++R + G K+ V VY L+ +TI+E +LQR R K + +++ Sbjct: 1015 S---DFNPHSDMQ---ALSRAHRIGQKKPVTVYRLVTSDTIEEGILQRARKKLLLGHVVV 1068 Query: 196 NALK 199 L+ Sbjct: 1069 EKLE 1072 >gi|312221998|emb|CBY01938.1| hypothetical protein [Leptosphaeria maculans] Length = 1469 Score = 42.7 bits (99), Expect = 0.026, Method: Compositional matrix adjust. Identities = 31/101 (30%), Positives = 49/101 (48%), Gaps = 12/101 (11%) Query: 101 IQEWNEGKIP----LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 + ++N+ + P LL + CG LNL G N LV F W+ QQ + R+ Sbjct: 622 VDKFNDPEGPEFVFLLSSKAGGCG--LNL-IGANRLVLFDPDWNPAADQQALARVW---- 674 Query: 157 RQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + G K+ FVY I TI+E V QR K ++ ++++ Sbjct: 675 -RDGQKKDCFVYRFITTGTIEEKVFQRQSHKQSLSSCVVDS 714 >gi|227519520|ref|ZP_03949569.1| Snf2 family helicase [Enterococcus faecalis TX0104] gi|227073045|gb|EEI11008.1| Snf2 family helicase [Enterococcus faecalis TX0104] Length = 1065 Score = 42.7 bits (99), Expect = 0.026, Method: Compositional matrix adjust. Identities = 32/128 (25%), Positives = 59/128 (46%), Gaps = 16/128 (12%) Query: 61 VIIEKANAAPIIVAYHFNSDLARLQKA---------FPQGRTLDKDPCTI-QEWNEGKIP 110 ++ K N +++ F S L+ L+K + +G T +D T+ +NEG+ Sbjct: 904 LVAAKENNRRVLLFSQFTSMLSILEKELNELGLETFYLRGSTKPQDRLTMANAFNEGEKD 963 Query: 111 LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYL 170 + + G GLNL + + + LWW+ +E R + G K+ V V+ + Sbjct: 964 VFLISLKAGGTGLNLTGADTV-ILYDLWWN-----PAVEEQAAGRAHRMGQKKVVEVWRM 1017 Query: 171 IAQNTIDE 178 IA+ T++E Sbjct: 1018 IAEGTVEE 1025 >gi|145616124|ref|XP_361006.2| hypothetical protein MGG_03549 [Magnaporthe oryzae 70-15] gi|145009888|gb|EDJ94544.1| hypothetical protein MGG_03549 [Magnaporthe oryzae 70-15] Length = 819 Score = 42.7 bits (99), Expect = 0.026, Method: Compositional matrix adjust. Identities = 26/78 (33%), Positives = 40/78 (51%), Gaps = 6/78 (7%) Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 G GLNL G N LV F W+ QQ + R+ + G K+ FVY IA +I+E Sbjct: 657 GCGLNL-IGANRLVLFDPDWNPAADQQALARVW-----RDGQKKDCFVYRFIATGSIEEK 710 Query: 180 VLQRLRTKSTIQDLLLNA 197 + QR K ++ ++++ Sbjct: 711 IFQRQSHKQSLSSCVVDS 728 >gi|225684006|gb|EEH22290.1| DNA repair and recombination protein RAD54 [Paracoccidioides brasiliensis Pb03] Length = 821 Score = 42.7 bits (99), Expect = 0.026, Method: Compositional matrix adjust. Identities = 26/78 (33%), Positives = 40/78 (51%), Gaps = 6/78 (7%) Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 G G+NL G N LV F W+ QQ + R+ + G K+ FVY IA TI+E Sbjct: 655 GCGINL-IGANRLVLFDPDWNPAADQQALARVW-----RDGQKKDCFVYRFIATGTIEEK 708 Query: 180 VLQRLRTKSTIQDLLLNA 197 + QR K ++ ++++ Sbjct: 709 IFQRQSHKQSLSSCVVDS 726 >gi|82596817|ref|XP_726418.1| hypothetical protein [Plasmodium yoelii yoelii str. 17XNL] gi|23481821|gb|EAA17983.1| hypothetical protein [Plasmodium yoelii yoelii] Length = 875 Score = 42.7 bits (99), Expect = 0.026, Method: Composition-based stats. Identities = 34/108 (31%), Positives = 52/108 (48%), Gaps = 12/108 (11%) Query: 94 LDKDPCTIQEW-NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWW---DLEEHQQMIE 149 +DK I+ + ++ KI + +CG GLNL N +VF L+W + + + Sbjct: 628 IDKREIYIKNFQSDEKIRIALLSITACGVGLNLT-AANTVVFGELYWVPGQMIQAEDRAH 686 Query: 150 RIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 RIG T V ++YL+AQNTIDE+V + + K LN Sbjct: 687 RIGTTHD-------TVNIHYLVAQNTIDEVVWKIINRKWNTLTTALNG 727 >gi|190572706|ref|YP_001970551.1| putative helicase [Stenotrophomonas maltophilia K279a] gi|190010628|emb|CAQ44237.1| putative helicase [Stenotrophomonas maltophilia K279a] Length = 1105 Score = 42.7 bits (99), Expect = 0.027, Method: Composition-based stats. Identities = 28/105 (26%), Positives = 51/105 (48%), Gaps = 7/105 (6%) Query: 91 GRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 G T D+ +Q + +G+IP+ + G GLNL + ++ F WW+ Q + Sbjct: 968 GDTQDR-ATPVQRFMQGEIPVFLISLKAGGVGLNLT-AADTVIHFDPWWNPAAENQASD- 1024 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 R + G ++ VFVY LI +I+E + + K+ + + +L Sbjct: 1025 ----RAHRIGQQQPVFVYRLITAGSIEERIAELQERKALLAESIL 1065 >gi|119943907|ref|YP_941587.1| SNF2-related protein [Psychromonas ingrahamii 37] gi|119862511|gb|ABM01988.1| SNF2-related protein [Psychromonas ingrahamii 37] Length = 1080 Score = 42.7 bits (99), Expect = 0.027, Method: Compositional matrix adjust. Identities = 26/102 (25%), Positives = 48/102 (47%), Gaps = 6/102 (5%) Query: 100 TIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQA 159 I ++ G +P+ + G GLNL + ++ + WW+ +E R + Sbjct: 968 VIDKFQNGNVPIFLISLKAGGVGLNLT-AADTVIHYDPWWN-----PAVENQATDRAYRI 1021 Query: 160 GFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 G + VFVY LI ++T++E VL K + D + + ++E Sbjct: 1022 GQDKPVFVYKLICEHTVEERVLALQTRKQKLADSVYGSEQEE 1063 >gi|225428788|ref|XP_002282100.1| PREDICTED: hypothetical protein [Vitis vinifera] Length = 912 Score = 42.7 bits (99), Expect = 0.027, Method: Compositional matrix adjust. Identities = 26/75 (34%), Positives = 40/75 (53%), Gaps = 6/75 (8%) Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 G GLNL GGN LV F W+ +Q R+ + G K+ V++Y ++ TI+E Sbjct: 617 GCGLNL-IGGNRLVLFDPDWNPANDKQAAARVW-----RDGQKKRVYIYRFLSTGTIEEK 670 Query: 180 VLQRLRTKSTIQDLL 194 V QR +K +Q ++ Sbjct: 671 VFQRQMSKEGLQKVI 685 >gi|22775414|dbj|BAC11858.1| recombinational repair protein [Magnaporthe grisea] Length = 803 Score = 42.7 bits (99), Expect = 0.027, Method: Compositional matrix adjust. Identities = 26/78 (33%), Positives = 40/78 (51%), Gaps = 6/78 (7%) Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 G GLNL G N LV F W+ QQ + R+ + G K+ FVY IA +I+E Sbjct: 641 GCGLNL-IGANRLVLFDPDWNPAADQQALARVW-----RDGQKKDCFVYRFIATGSIEEK 694 Query: 180 VLQRLRTKSTIQDLLLNA 197 + QR K ++ ++++ Sbjct: 695 IFQRQSHKQSLSSCVVDS 712 >gi|327349292|gb|EGE78149.1| DsDNA-dependent ATPase Rad54 [Ajellomyces dermatitidis ATCC 18188] Length = 849 Score = 42.7 bits (99), Expect = 0.027, Method: Compositional matrix adjust. Identities = 26/78 (33%), Positives = 40/78 (51%), Gaps = 6/78 (7%) Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 G G+NL G N LV F W+ QQ + R+ + G K+ FVY IA TI+E Sbjct: 683 GCGINL-IGANRLVLFDPDWNPAADQQALARVW-----RDGQKKDCFVYRFIATGTIEEK 736 Query: 180 VLQRLRTKSTIQDLLLNA 197 + QR K ++ ++++ Sbjct: 737 IFQRQSHKQSLSSCVVDS 754 >gi|157130680|ref|XP_001661961.1| steroid receptor-interacting snf2 domain protein [Aedes aegypti] gi|108881922|gb|EAT46147.1| steroid receptor-interacting snf2 domain protein [Aedes aegypti] Length = 791 Score = 42.7 bits (99), Expect = 0.028, Method: Compositional matrix adjust. Identities = 25/77 (32%), Positives = 40/77 (51%), Gaps = 6/77 (7%) Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 G GLNL G N LV F W+ +Q + R+ + G K+ F+Y L+A TI+E Sbjct: 566 GCGLNL-IGANRLVMFDPDWNPANDEQAMARVW-----RDGQKKPCFIYRLLATGTIEEK 619 Query: 180 VLQRLRTKSTIQDLLLN 196 + QR K + + +++ Sbjct: 620 IFQRQTHKKALSNTVVD 636 >gi|74177549|dbj|BAB31000.3| unnamed protein product [Mus musculus] Length = 559 Score = 42.7 bits (99), Expect = 0.028, Method: Compositional matrix adjust. Identities = 27/80 (33%), Positives = 42/80 (52%), Gaps = 10/80 (12%) Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQM--IERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 G G+NL ++ + S W + Q M R+G T+Q V VY LI + TI+ Sbjct: 434 GLGINLTAADTVIFYDSDWNPTVDQQAMDRAHRLGQTKQ--------VTVYRLICKGTIE 485 Query: 178 ELVLQRLRTKSTIQDLLLNA 197 E +LQR + KS IQ ++++ Sbjct: 486 ERILQRAKEKSEIQRMVISG 505 >gi|325089155|gb|EGC42465.1| DNA repair and recombination protein RAD54 [Ajellomyces capsulatus H88] Length = 830 Score = 42.7 bits (99), Expect = 0.028, Method: Compositional matrix adjust. Identities = 26/78 (33%), Positives = 40/78 (51%), Gaps = 6/78 (7%) Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 G G+NL G N LV F W+ QQ + R+ + G K+ FVY IA TI+E Sbjct: 664 GCGINL-VGANRLVLFDPDWNPAADQQALARVW-----RDGQKKDCFVYRFIATGTIEEK 717 Query: 180 VLQRLRTKSTIQDLLLNA 197 + QR K ++ ++++ Sbjct: 718 IFQRQSHKQSLSSCVVDS 735 >gi|302533833|ref|ZP_07286175.1| SNF2/RAD54 family helicase [Streptomyces sp. C] gi|302442728|gb|EFL14544.1| SNF2/RAD54 family helicase [Streptomyces sp. C] Length = 645 Score = 42.7 bits (99), Expect = 0.028, Method: Composition-based stats. Identities = 22/97 (22%), Positives = 47/97 (48%), Gaps = 6/97 (6%) Query: 101 IQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 + + G++P+ + G GLNL G++ + + WW+ +E R + G Sbjct: 532 VDRFQSGEVPVFLLSLKAAGTGLNLTRAGHV-IHYDRWWN-----PAVEEQATDRAYRIG 585 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + V V+ +IA+ T+++ + + L K + D +L + Sbjct: 586 QTQPVQVHRIIAEGTVEDRIAELLEAKRALADAVLGS 622 >gi|184201460|ref|YP_001855667.1| SNF2 family helicase [Kocuria rhizophila DC2201] gi|183581690|dbj|BAG30161.1| putative helicase [Kocuria rhizophila DC2201] Length = 925 Score = 42.7 bits (99), Expect = 0.028, Method: Composition-based stats. Identities = 29/117 (24%), Positives = 54/117 (46%), Gaps = 7/117 (5%) Query: 80 DLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWW 139 D A + A+ G T D+ ++ + G+ P+ + G G+NL + WW Sbjct: 796 DEAGIAYAYLDGSTKDR-AAALKTFRSGRAPVFLVSLKAGGFGINLTEA-DYCYLLDPWW 853 Query: 140 DLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + Q ++R + G R V VY ++AQ+TI+E V++ K+ + +L+ Sbjct: 854 NPAAENQAVDR-----THRIGQTRKVMVYRMVAQDTIEEKVMELKARKAELFSAVLD 905 >gi|312901374|ref|ZP_07760654.1| protein, SNF2 family [Enterococcus faecalis TX0470] gi|311291537|gb|EFQ70093.1| protein, SNF2 family [Enterococcus faecalis TX0470] Length = 404 Score = 42.7 bits (99), Expect = 0.028, Method: Compositional matrix adjust. Identities = 42/179 (23%), Positives = 78/179 (43%), Gaps = 25/179 (13%) Query: 21 EAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSD 80 E +++ SK LA+G YY +K +K+ +++ E + II+ Y++ + Sbjct: 231 EEYDTPSK------LAHGLRYYANQK-------DKLDYAQMLCE-GTESNIIIFYYYQKE 276 Query: 81 LARLQ-----KAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFF 135 + L+ K F + + Q W K + F + G+ LQY N ++F+ Sbjct: 277 IEALKEKIKNKTFFEVNGKHSNLPPKQSWKSLKNSVTFVQYMAGSAGIELQY-ANTVIFY 335 Query: 136 SLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 + + +++ Q + R + G + V VY I Q TI++ V Q L K + L Sbjct: 336 TPTYSYQDYSQ-----ALGRAYRNGQTKKVTVYRFITQQTIEQAVYQALENKEDFSEEL 389 >gi|225441419|ref|XP_002275336.1| PREDICTED: similar to PIE1 (PHOTOPERIOD-INDEPENDENT EARLY FLOWERING 1); ATP binding / DNA binding / helicase [Vitis vinifera] Length = 2049 Score = 42.7 bits (99), Expect = 0.029, Method: Compositional matrix adjust. Identities = 26/90 (28%), Positives = 47/90 (52%), Gaps = 6/90 (6%) Query: 108 KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFV 167 KI + S G G+NL G + ++F+ W+ QQ +R + G R V + Sbjct: 1115 KIFIFILSTRSGGVGINL-VGADTVIFYDSDWNPAMDQQAQDRC-----HRIGQTREVHI 1168 Query: 168 YYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 Y LI+++TI+E +L++ K + DL++ + Sbjct: 1169 YRLISESTIEENILKKANQKRALDDLVIQS 1198 >gi|331238296|ref|XP_003331803.1| chromodomain helicase hrp1 [Puccinia graminis f. sp. tritici CRL 75-36-700-3] gi|309310793|gb|EFP87384.1| chromodomain helicase hrp1 [Puccinia graminis f. sp. tritici CRL 75-36-700-3] Length = 1611 Score = 42.7 bits (99), Expect = 0.029, Method: Composition-based stats. Identities = 25/86 (29%), Positives = 44/86 (51%), Gaps = 6/86 (6%) Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 G G+NL+ +++F S W + Q M R + G K V VY L+ ++T++E Sbjct: 733 GLGINLETADTVIIFDSDWNPQNDLQAM------ARAHRIGQKNHVNVYRLVTKDTVEED 786 Query: 180 VLQRLRTKSTIQDLLLNALKKETIHV 205 VL+R + K ++ ++N + HV Sbjct: 787 VLERAKRKMILEYAIINQMDTSGKHV 812 >gi|266620561|ref|ZP_06113496.1| SNF2 family protein [Clostridium hathewayi DSM 13479] gi|288867854|gb|EFD00153.1| SNF2 family protein [Clostridium hathewayi DSM 13479] Length = 1154 Score = 42.7 bits (99), Expect = 0.029, Method: Compositional matrix adjust. Identities = 24/96 (25%), Positives = 48/96 (50%), Gaps = 6/96 (6%) Query: 101 IQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 ++ +NE P+ + G GLNL +I++ F WW+ Q + R + G Sbjct: 1037 VRAFNEDDTPVFLISLKAGGTGLNLT-AASIVIHFDPWWNQAAQNQATD-----RAHRIG 1090 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 ++ V VY LI ++T++E +L+ K+ + + ++ Sbjct: 1091 QQQVVTVYKLIMKDTLEEKILEMQEKKAGLSEEIIT 1126 >gi|83767454|dbj|BAE57593.1| unnamed protein product [Aspergillus oryzae] Length = 815 Score = 42.7 bits (99), Expect = 0.029, Method: Compositional matrix adjust. Identities = 26/78 (33%), Positives = 40/78 (51%), Gaps = 6/78 (7%) Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 G GLNL G N LV F W+ QQ + R+ + G K+ FVY IA +I+E Sbjct: 649 GCGLNL-IGANRLVLFDPDWNPAADQQALARVW-----RDGQKKDCFVYRFIATGSIEEK 702 Query: 180 VLQRLRTKSTIQDLLLNA 197 + QR K ++ ++++ Sbjct: 703 IFQRQSHKQSLSSCVVDS 720 >gi|262193501|ref|YP_003264710.1| SNF2-related protein [Haliangium ochraceum DSM 14365] gi|262076848|gb|ACY12817.1| SNF2-related protein [Haliangium ochraceum DSM 14365] Length = 777 Score = 42.7 bits (99), Expect = 0.029, Method: Composition-based stats. Identities = 35/134 (26%), Positives = 58/134 (43%), Gaps = 16/134 (11%) Query: 71 IIVAYHFNSDLARLQKAFPQ---------GRTLDKDPCTIQEWNEGKIPLLFAHPASCGH 121 I+V F S LA L + + G T ++ + E+ EG+ + + G Sbjct: 628 ILVFSQFTSMLALLSQGLEERGVAHSVLTGATANRQR-AVDEFQEGRTEVFLISLKAGGT 686 Query: 122 GLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVL 181 GLNL + +V + WW+ Q + R + G R VFVY LI +++E +L Sbjct: 687 GLNLTR-ADTVVHYDPWWNPAAQAQATD-----RAYRIGQTRPVFVYNLITAGSVEERML 740 Query: 182 QRLRTKSTIQDLLL 195 + K + D +L Sbjct: 741 ALQQRKRHLADTIL 754 >gi|239608107|gb|EEQ85094.1| DNA repair and recombination protein RAD54 [Ajellomyces dermatitidis ER-3] Length = 795 Score = 42.7 bits (99), Expect = 0.029, Method: Compositional matrix adjust. Identities = 26/78 (33%), Positives = 40/78 (51%), Gaps = 6/78 (7%) Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 G G+NL G N LV F W+ QQ + R+ + G K+ FVY IA TI+E Sbjct: 629 GCGINL-IGANRLVLFDPDWNPAADQQALARVW-----RDGQKKDCFVYRFIATGTIEEK 682 Query: 180 VLQRLRTKSTIQDLLLNA 197 + QR K ++ ++++ Sbjct: 683 IFQRQSHKQSLSSCVVDS 700 >gi|284041008|ref|YP_003390938.1| SNF2-related protein [Spirosoma linguale DSM 74] gi|283820301|gb|ADB42139.1| SNF2-related protein [Spirosoma linguale DSM 74] Length = 1003 Score = 42.7 bits (99), Expect = 0.029, Method: Compositional matrix adjust. Identities = 34/129 (26%), Positives = 55/129 (42%), Gaps = 13/129 (10%) Query: 84 LQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEE 143 ++ A+ G T+D+ + + L + G G NL + + WW+ Sbjct: 878 IKYAYLDGSTVDRQSQVELFQTDDSVKLFLISLKAGGLGHNLTAADYVFIL-DPWWN--- 933 Query: 144 HQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKS-------TIQDLLLN 196 IE V R + G ++ VF Y IA+NT++E +L R K T ++ + Sbjct: 934 --PAIEAQAVDRAHRIGQQKTVFTYKFIAKNTVEEKILSLQRAKQQLAGSLITTEENFMK 991 Query: 197 ALKKETIHV 205 AL KE I V Sbjct: 992 ALTKEDIMV 1000 >gi|115389990|ref|XP_001212500.1| DNA repair and recombination protein RAD54 [Aspergillus terreus NIH2624] gi|114194896|gb|EAU36596.1| DNA repair and recombination protein RAD54 [Aspergillus terreus NIH2624] Length = 821 Score = 42.7 bits (99), Expect = 0.029, Method: Compositional matrix adjust. Identities = 26/78 (33%), Positives = 40/78 (51%), Gaps = 6/78 (7%) Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 G GLNL G N LV F W+ QQ + R+ + G K+ FVY IA +I+E Sbjct: 655 GCGLNL-IGANRLVLFDPDWNPAADQQALARVW-----RDGQKKDCFVYRFIATGSIEEK 708 Query: 180 VLQRLRTKSTIQDLLLNA 197 + QR K ++ ++++ Sbjct: 709 IFQRQSHKQSLSSCVVDS 726 >gi|221485219|gb|EEE23509.1| hypothetical protein TGGT1_105260 [Toxoplasma gondii GT1] Length = 1244 Score = 42.7 bits (99), Expect = 0.030, Method: Composition-based stats. Identities = 28/71 (39%), Positives = 41/71 (57%), Gaps = 7/71 (9%) Query: 118 SCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFK-RAVFVYYLIAQNTI 176 +CGHGLNL G + VF L+W QMI+ R + G + +V ++YLIA+ T+ Sbjct: 1021 ACGHGLNLTAAGTV-VFAELYW---VPGQMIQ--AEDRSHRIGTEFSSVQIHYLIAEGTL 1074 Query: 177 DELVLQRLRTK 187 DE V + L+ K Sbjct: 1075 DETVFRILQRK 1085 >gi|218233639|ref|YP_002366534.1| putative helicase [Bacillus cereus B4264] gi|218161596|gb|ACK61588.1| putative helicase [Bacillus cereus B4264] Length = 1064 Score = 42.7 bits (99), Expect = 0.030, Method: Compositional matrix adjust. Identities = 26/75 (34%), Positives = 37/75 (49%), Gaps = 6/75 (8%) Query: 104 WNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKR 163 +NEG+ L + G GLNL G + ++ + LWW+ QQ R + G K Sbjct: 958 FNEGEGDLFLISLKAGGTGLNLT-GADTVILYDLWWNPAVEQQ-----AADRAYRMGQKN 1011 Query: 164 AVFVYYLIAQNTIDE 178 V V L+AQ TI+E Sbjct: 1012 TVQVIKLVAQGTIEE 1026 >gi|259485020|tpe|CBF81736.1| TPA: DNA-dependent ATPase (Eurofung) [Aspergillus nidulans FGSC A4] Length = 833 Score = 42.7 bits (99), Expect = 0.030, Method: Compositional matrix adjust. Identities = 26/78 (33%), Positives = 40/78 (51%), Gaps = 6/78 (7%) Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 G GLNL G N LV F W+ QQ + R+ + G K+ FVY IA +I+E Sbjct: 667 GCGLNL-IGANRLVLFDPDWNPAADQQALARVW-----RDGQKKDCFVYRFIATGSIEEK 720 Query: 180 VLQRLRTKSTIQDLLLNA 197 + QR K ++ ++++ Sbjct: 721 IFQRQSHKQSLSSCVVDS 738 >gi|229043607|ref|ZP_04191314.1| Helicase, SWF/SNF [Bacillus cereus AH676] gi|228725682|gb|EEL76932.1| Helicase, SWF/SNF [Bacillus cereus AH676] Length = 1064 Score = 42.7 bits (99), Expect = 0.030, Method: Compositional matrix adjust. Identities = 26/75 (34%), Positives = 37/75 (49%), Gaps = 6/75 (8%) Query: 104 WNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKR 163 +NEG+ L + G GLNL G + ++ + LWW+ QQ R + G K Sbjct: 958 FNEGEGDLFLISLKAGGTGLNLT-GADTVILYDLWWNPAVEQQ-----AADRAYRMGQKN 1011 Query: 164 AVFVYYLIAQNTIDE 178 V V L+AQ TI+E Sbjct: 1012 TVQVIKLVAQGTIEE 1026 >gi|229178258|ref|ZP_04305628.1| Helicase, SWF/SNF [Bacillus cereus 172560W] gi|228605137|gb|EEK62588.1| Helicase, SWF/SNF [Bacillus cereus 172560W] Length = 1064 Score = 42.7 bits (99), Expect = 0.030, Method: Compositional matrix adjust. Identities = 26/75 (34%), Positives = 37/75 (49%), Gaps = 6/75 (8%) Query: 104 WNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKR 163 +NEG+ L + G GLNL G + ++ + LWW+ QQ R + G K Sbjct: 958 FNEGEGDLFLISLKAGGTGLNLT-GADTVILYDLWWNPAVEQQ-----AADRAYRMGQKN 1011 Query: 164 AVFVYYLIAQNTIDE 178 V V L+AQ TI+E Sbjct: 1012 TVQVIKLVAQGTIEE 1026 >gi|226293396|gb|EEH48816.1| DNA repair and recombination protein RAD54 [Paracoccidioides brasiliensis Pb18] Length = 863 Score = 42.7 bits (99), Expect = 0.030, Method: Compositional matrix adjust. Identities = 26/78 (33%), Positives = 40/78 (51%), Gaps = 6/78 (7%) Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 G G+NL G N LV F W+ QQ + R+ + G K+ FVY IA TI+E Sbjct: 697 GCGINL-IGANRLVLFDPDWNPAADQQALARVW-----RDGQKKDCFVYRFIATGTIEEK 750 Query: 180 VLQRLRTKSTIQDLLLNA 197 + QR K ++ ++++ Sbjct: 751 IFQRQSHKQSLSSCVVDS 768 >gi|60688369|gb|AAH90481.1| Hells protein [Danio rerio] Length = 252 Score = 42.7 bits (99), Expect = 0.030, Method: Compositional matrix adjust. Identities = 30/104 (28%), Positives = 50/104 (48%), Gaps = 12/104 (11%) Query: 95 DKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLW---WDLEEHQQMIERI 151 D+D + ++ ++ L + G G+NL +++F S W DL+ Q RI Sbjct: 68 DRDENMKKFSSDPEVFLFLLSTRAGGLGINLTSADTVIIFDSDWNPQADLQ-AQDRCHRI 126 Query: 152 GVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 G T+ V VY LI NTIDE +L+R K ++ +++ Sbjct: 127 GQTK--------PVVVYRLITANTIDEKILERASAKRKLEKMVI 162 >gi|229144464|ref|ZP_04272868.1| Helicase, SWF/SNF [Bacillus cereus BDRD-ST24] gi|228638999|gb|EEK95425.1| Helicase, SWF/SNF [Bacillus cereus BDRD-ST24] Length = 1064 Score = 42.7 bits (99), Expect = 0.030, Method: Compositional matrix adjust. Identities = 26/75 (34%), Positives = 37/75 (49%), Gaps = 6/75 (8%) Query: 104 WNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKR 163 +NEG+ L + G GLNL G + ++ + LWW+ QQ R + G K Sbjct: 958 FNEGEGDLFLISLKAGGTGLNLT-GADTVILYDLWWNPAVEQQ-----AADRAYRMGQKN 1011 Query: 164 AVFVYYLIAQNTIDE 178 V V L+AQ TI+E Sbjct: 1012 TVQVIKLVAQGTIEE 1026 >gi|229150056|ref|ZP_04278279.1| Helicase, SWF/SNF [Bacillus cereus m1550] gi|228633355|gb|EEK89961.1| Helicase, SWF/SNF [Bacillus cereus m1550] Length = 1064 Score = 42.7 bits (99), Expect = 0.030, Method: Compositional matrix adjust. Identities = 26/75 (34%), Positives = 37/75 (49%), Gaps = 6/75 (8%) Query: 104 WNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKR 163 +NEG+ L + G GLNL G + ++ + LWW+ QQ R + G K Sbjct: 958 FNEGEGDLFLISLKAGGTGLNLT-GADTVILYDLWWNPAVEQQ-----AADRAYRMGQKN 1011 Query: 164 AVFVYYLIAQNTIDE 178 V V L+AQ TI+E Sbjct: 1012 TVQVIKLVAQGTIEE 1026 >gi|237842313|ref|XP_002370454.1| SNF2 family N-terminal domain-containing protein [Toxoplasma gondii ME49] gi|211968118|gb|EEB03314.1| SNF2 family N-terminal domain-containing protein [Toxoplasma gondii ME49] gi|221502587|gb|EEE28307.1| helicase, putative [Toxoplasma gondii VEG] Length = 1231 Score = 42.7 bits (99), Expect = 0.030, Method: Composition-based stats. Identities = 28/71 (39%), Positives = 41/71 (57%), Gaps = 7/71 (9%) Query: 118 SCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFK-RAVFVYYLIAQNTI 176 +CGHGLNL G + VF L+W QMI+ R + G + +V ++YLIA+ T+ Sbjct: 1008 ACGHGLNLTAAGTV-VFAELYW---VPGQMIQ--AEDRSHRIGTEFSSVQIHYLIAEGTL 1061 Query: 177 DELVLQRLRTK 187 DE V + L+ K Sbjct: 1062 DETVFRILQRK 1072 >gi|317143637|ref|XP_001819595.2| DNA repair protein rhp54 [Aspergillus oryzae RIB40] Length = 827 Score = 42.7 bits (99), Expect = 0.030, Method: Compositional matrix adjust. Identities = 26/78 (33%), Positives = 40/78 (51%), Gaps = 6/78 (7%) Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 G GLNL G N LV F W+ QQ + R+ + G K+ FVY IA +I+E Sbjct: 661 GCGLNL-IGANRLVLFDPDWNPAADQQALARVW-----RDGQKKDCFVYRFIATGSIEEK 714 Query: 180 VLQRLRTKSTIQDLLLNA 197 + QR K ++ ++++ Sbjct: 715 IFQRQSHKQSLSSCVVDS 732 >gi|228938966|ref|ZP_04101566.1| Helicase, SWF/SNF [Bacillus thuringiensis serovar berliner ATCC 10792] gi|228971848|ref|ZP_04132469.1| Helicase, SWF/SNF [Bacillus thuringiensis serovar thuringiensis str. T01001] gi|228978456|ref|ZP_04138833.1| Helicase, SWF/SNF [Bacillus thuringiensis Bt407] gi|228781473|gb|EEM29674.1| Helicase, SWF/SNF [Bacillus thuringiensis Bt407] gi|228787938|gb|EEM35896.1| Helicase, SWF/SNF [Bacillus thuringiensis serovar thuringiensis str. T01001] gi|228820815|gb|EEM66840.1| Helicase, SWF/SNF [Bacillus thuringiensis serovar berliner ATCC 10792] gi|326939468|gb|AEA15364.1| SWF/SNF family helicase [Bacillus thuringiensis serovar chinensis CT-43] Length = 1064 Score = 42.7 bits (99), Expect = 0.031, Method: Compositional matrix adjust. Identities = 26/75 (34%), Positives = 37/75 (49%), Gaps = 6/75 (8%) Query: 104 WNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKR 163 +NEG+ L + G GLNL G + ++ + LWW+ QQ R + G K Sbjct: 958 FNEGEGDLFLISLKAGGTGLNLT-GADTVILYDLWWNPAVEQQ-----AADRAYRMGQKN 1011 Query: 164 AVFVYYLIAQNTIDE 178 V V L+AQ TI+E Sbjct: 1012 TVQVIKLVAQGTIEE 1026 >gi|229109309|ref|ZP_04238907.1| Helicase, SWF/SNF [Bacillus cereus Rock1-15] gi|228674146|gb|EEL29392.1| Helicase, SWF/SNF [Bacillus cereus Rock1-15] Length = 1064 Score = 42.7 bits (99), Expect = 0.031, Method: Compositional matrix adjust. Identities = 26/75 (34%), Positives = 37/75 (49%), Gaps = 6/75 (8%) Query: 104 WNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKR 163 +NEG+ L + G GLNL G + ++ + LWW+ QQ R + G K Sbjct: 958 FNEGEGDLFLISLKAGGTGLNLT-GADTVILYDLWWNPAVEQQ-----AADRAYRMGQKN 1011 Query: 164 AVFVYYLIAQNTIDE 178 V V L+AQ TI+E Sbjct: 1012 TVQVIKLVAQGTIEE 1026 >gi|284031541|ref|YP_003381472.1| SNF2-like protein [Kribbella flavida DSM 17836] gi|283810834|gb|ADB32673.1| SNF2-related protein [Kribbella flavida DSM 17836] Length = 961 Score = 42.7 bits (99), Expect = 0.031, Method: Composition-based stats. Identities = 29/107 (27%), Positives = 49/107 (45%), Gaps = 6/107 (5%) Query: 91 GRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 G + K ++ + G+IP+ + G GLNL ++ V + WW+ +E Sbjct: 837 GTPVRKREEMVERFQAGEIPVFLLSLKAAGTGLNLTRADHV-VHYDRWWN-----PAVED 890 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 R + G R V V+ LIA+ TI++ + L K + D +L A Sbjct: 891 QATDRAYRIGQIRPVQVHRLIAEGTIEDRIAAMLAGKRALADSVLTA 937 >gi|228964841|ref|ZP_04125946.1| Helicase, SWF/SNF [Bacillus thuringiensis serovar sotto str. T04001] gi|228794779|gb|EEM42280.1| Helicase, SWF/SNF [Bacillus thuringiensis serovar sotto str. T04001] Length = 1064 Score = 42.7 bits (99), Expect = 0.032, Method: Compositional matrix adjust. Identities = 26/75 (34%), Positives = 37/75 (49%), Gaps = 6/75 (8%) Query: 104 WNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKR 163 +NEG+ L + G GLNL G + ++ + LWW+ QQ R + G K Sbjct: 958 FNEGEGDLFLISLKAGGTGLNLT-GADTVILYDLWWNPAVEQQ-----AADRAYRMGQKN 1011 Query: 164 AVFVYYLIAQNTIDE 178 V V L+AQ TI+E Sbjct: 1012 TVQVIKLVAQGTIEE 1026 >gi|229069404|ref|ZP_04202693.1| Helicase, SWF/SNF [Bacillus cereus F65185] gi|228713543|gb|EEL65429.1| Helicase, SWF/SNF [Bacillus cereus F65185] Length = 1064 Score = 42.7 bits (99), Expect = 0.032, Method: Compositional matrix adjust. Identities = 26/75 (34%), Positives = 37/75 (49%), Gaps = 6/75 (8%) Query: 104 WNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKR 163 +NEG+ L + G GLNL G + ++ + LWW+ QQ R + G K Sbjct: 958 FNEGEGDLFLISLKAGGTGLNLT-GADTVILYDLWWNPAVEQQ-----AADRAYRMGQKN 1011 Query: 164 AVFVYYLIAQNTIDE 178 V V L+AQ TI+E Sbjct: 1012 TVQVIKLVAQGTIEE 1026 >gi|304439383|ref|ZP_07399295.1| SNF2 domain protein [Peptoniphilus duerdenii ATCC BAA-1640] gi|304372165|gb|EFM25759.1| SNF2 domain protein [Peptoniphilus duerdenii ATCC BAA-1640] Length = 55 Score = 42.7 bits (99), Expect = 0.032, Method: Compositional matrix adjust. Identities = 17/37 (45%), Positives = 27/37 (72%) Query: 50 EVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQK 86 ++HD K+ ALE +IE AN P+++AY F DL R+++ Sbjct: 15 QIHDRKLDALEDLIEGANGKPVLIAYWFKHDLTRIKE 51 >gi|119472846|ref|XP_001258430.1| SNF2 family N-terminal domain protein [Neosartorya fischeri NRRL 181] gi|119406582|gb|EAW16533.1| SNF2 family N-terminal domain protein [Neosartorya fischeri NRRL 181] Length = 835 Score = 42.7 bits (99), Expect = 0.032, Method: Compositional matrix adjust. Identities = 26/78 (33%), Positives = 40/78 (51%), Gaps = 6/78 (7%) Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 G GLNL G N LV F W+ QQ + R+ + G K+ FVY IA +I+E Sbjct: 669 GCGLNL-IGANRLVLFDPDWNPAADQQALARVW-----RDGQKKDCFVYRFIATGSIEEK 722 Query: 180 VLQRLRTKSTIQDLLLNA 197 + QR K ++ ++++ Sbjct: 723 IFQRQSHKQSLSSCVVDS 740 >gi|218896786|ref|YP_002445197.1| putative helicase [Bacillus cereus G9842] gi|218540700|gb|ACK93094.1| putative helicase [Bacillus cereus G9842] Length = 1064 Score = 42.7 bits (99), Expect = 0.032, Method: Compositional matrix adjust. Identities = 26/75 (34%), Positives = 37/75 (49%), Gaps = 6/75 (8%) Query: 104 WNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKR 163 +NEG+ L + G GLNL G + ++ + LWW+ QQ R + G K Sbjct: 958 FNEGEGELFLISLKAGGTGLNLT-GADTVILYDLWWNPAVEQQ-----AADRAYRMGQKN 1011 Query: 164 AVFVYYLIAQNTIDE 178 V V L+AQ TI+E Sbjct: 1012 TVQVIKLVAQGTIEE 1026 >gi|133778670|gb|AAI33862.1| Hells protein [Danio rerio] Length = 270 Score = 42.7 bits (99), Expect = 0.032, Method: Compositional matrix adjust. Identities = 30/104 (28%), Positives = 50/104 (48%), Gaps = 12/104 (11%) Query: 95 DKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLW---WDLEEHQQMIERI 151 D+D + ++ ++ L + G G+NL +++F S W DL+ Q RI Sbjct: 86 DRDENMKKFSSDPEVFLFLLSTRAGGLGINLTSADTVIIFDSDWNPQADLQ-AQDRCHRI 144 Query: 152 GVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 G T+ V VY LI NTIDE +L+R K ++ +++ Sbjct: 145 GQTK--------PVVVYRLITANTIDEKILERASAKRKLEKMVI 180 >gi|328856433|gb|EGG05554.1| hypothetical protein MELLADRAFT_87820 [Melampsora larici-populina 98AG31] Length = 593 Score = 42.7 bits (99), Expect = 0.032, Method: Compositional matrix adjust. Identities = 46/152 (30%), Positives = 67/152 (44%), Gaps = 21/152 (13%) Query: 53 DEKIKALEVIIEKANAAPIIVAYHFNS---DLARLQKAFPQGRTLDKDPCTIQEWNEGKI 109 DEKI +++ + ++ H S L RL PQ + D +Q +N Sbjct: 287 DEKI----ILVSNFTSTLDVIEAHCRSQNYSLCRLDGKTPQTKRDD----IVQTFNRMTA 338 Query: 110 PLLFA---HPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVF 166 F S G GLNL G + L+ F W+ Q + RI RQ G K+A Sbjct: 339 RSQFVFLLSSKSGGVGLNL-IGASRLILFDSDWNPATDLQAMARI----WRQ-GQKKACH 392 Query: 167 VYYLIAQNTIDELVLQRLRTKSTI-QDLLLNA 197 +Y +A TIDE + QR TK+ + DL+ +A Sbjct: 393 IYRFLATGTIDECIFQRQVTKTGLATDLIKDA 424 >gi|242062862|ref|XP_002452720.1| hypothetical protein SORBIDRAFT_04g031330 [Sorghum bicolor] gi|241932551|gb|EES05696.1| hypothetical protein SORBIDRAFT_04g031330 [Sorghum bicolor] Length = 901 Score = 42.7 bits (99), Expect = 0.033, Method: Compositional matrix adjust. Identities = 26/81 (32%), Positives = 45/81 (55%), Gaps = 12/81 (14%) Query: 118 SCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER---IGVTRQRQAGFKRAVFVYYLIAQN 174 S G G+NL G + ++F+ W+ QQ +R IG TR+ V +Y LI+++ Sbjct: 53 SGGVGINL-VGADTVIFYDSDWNPAMDQQAQDRCHRIGQTRE--------VHIYRLISES 103 Query: 175 TIDELVLQRLRTKSTIQDLLL 195 TI+E +L++ K + DL++ Sbjct: 104 TIEENILKKANQKRALDDLVI 124 >gi|302871105|ref|YP_003839741.1| SNF2-related protein [Caldicellulosiruptor obsidiansis OB47] gi|302573964|gb|ADL41755.1| SNF2-related protein [Caldicellulosiruptor obsidiansis OB47] Length = 1139 Score = 42.7 bits (99), Expect = 0.033, Method: Compositional matrix adjust. Identities = 25/97 (25%), Positives = 47/97 (48%), Gaps = 6/97 (6%) Query: 101 IQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 + +N G+ + + G GLN+ G ++++ F WW+ +E R + G Sbjct: 1031 VNRFNSGEKNVFLLSLKAGGFGLNIT-GADVVIHFDAWWN-----PAVENQATARSHRLG 1084 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 K V + +IA+N+I+E +L + K + D L+ A Sbjct: 1085 QKNVVQSFKIIAKNSIEEKILALQQKKKDLFDSLIEA 1121 >gi|228900434|ref|ZP_04064661.1| Helicase, SWF/SNF [Bacillus thuringiensis IBL 4222] gi|228859174|gb|EEN03607.1| Helicase, SWF/SNF [Bacillus thuringiensis IBL 4222] Length = 1064 Score = 42.7 bits (99), Expect = 0.033, Method: Compositional matrix adjust. Identities = 26/75 (34%), Positives = 37/75 (49%), Gaps = 6/75 (8%) Query: 104 WNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKR 163 +NEG+ L + G GLNL G + ++ + LWW+ QQ R + G K Sbjct: 958 FNEGEGELFLISLKAGGTGLNLT-GADTVILYDLWWNPAVEQQ-----AADRAYRMGQKN 1011 Query: 164 AVFVYYLIAQNTIDE 178 V V L+AQ TI+E Sbjct: 1012 TVQVIKLVAQGTIEE 1026 >gi|228907542|ref|ZP_04071399.1| Helicase, SWF/SNF [Bacillus thuringiensis IBL 200] gi|228852034|gb|EEM96831.1| Helicase, SWF/SNF [Bacillus thuringiensis IBL 200] Length = 1064 Score = 42.7 bits (99), Expect = 0.033, Method: Compositional matrix adjust. Identities = 26/75 (34%), Positives = 37/75 (49%), Gaps = 6/75 (8%) Query: 104 WNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKR 163 +NEG+ L + G GLNL G + ++ + LWW+ QQ R + G K Sbjct: 958 FNEGEGDLFLISLKAGGTGLNLT-GADTVILYDLWWNPAVEQQ-----AADRAYRMGQKN 1011 Query: 164 AVFVYYLIAQNTIDE 178 V V L+AQ TI+E Sbjct: 1012 TVQVIKLVAQGTIEE 1026 >gi|124513860|ref|XP_001350286.1| DNA helicase, putative [Plasmodium falciparum 3D7] gi|23615703|emb|CAD52695.1| DNA helicase, putative [Plasmodium falciparum 3D7] Length = 906 Score = 42.7 bits (99), Expect = 0.033, Method: Composition-based stats. Identities = 30/98 (30%), Positives = 46/98 (46%), Gaps = 11/98 (11%) Query: 105 NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWW---DLEEHQQMIERIGVTRQRQAGF 161 N+ + + +CG GLNL N +VF L+W + + + RIG Sbjct: 708 NDDNVKIALLSITACGMGLNLT-AANTVVFGELFWVPGQIIQAEDRAHRIGTAHD----- 761 Query: 162 KRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 V ++YLIAQNTIDE+V + + K LN ++ Sbjct: 762 --VVNIHYLIAQNTIDEIVWKIINRKWNTLTTALNGIE 797 >gi|127512820|ref|YP_001094017.1| SNF2-related protein [Shewanella loihica PV-4] gi|126638115|gb|ABO23758.1| SNF2-related protein [Shewanella loihica PV-4] Length = 1161 Score = 42.7 bits (99), Expect = 0.033, Method: Compositional matrix adjust. Identities = 27/100 (27%), Positives = 50/100 (50%), Gaps = 7/100 (7%) Query: 91 GRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 GR+ +D I+ + G++ + + G GLNL ++++ WW+ +Q +R Sbjct: 1037 GRSRHRDRI-IERFRRGEVNVFLISLKAGGSGLNLTEA-DVVIHVDPWWNPAAEEQASDR 1094 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 + G + VFVY LI QNT++E + Q ++K + Sbjct: 1095 A-----YRIGQDKPVFVYKLICQNTVEERIQQLQQSKQAL 1129 >gi|254565555|ref|XP_002489888.1| Protein whose overexpression affects chromosome stability, potential Cdc28p substrate [Pichia pastoris GS115] gi|238029684|emb|CAY67607.1| Protein whose overexpression affects chromosome stability, potential Cdc28p substrate [Pichia pastoris GS115] gi|328350301|emb|CCA36701.1| putative SNF2 family helicase/ATPase [Pichia pastoris CBS 7435] Length = 1009 Score = 42.4 bits (98), Expect = 0.034, Method: Compositional matrix adjust. Identities = 26/95 (27%), Positives = 48/95 (50%), Gaps = 14/95 (14%) Query: 104 WNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLW--WDLEEHQQMIERIGVTRQRQAGF 161 + + IP+ + G G+NL N+++F + D ++ + R+G T++ Sbjct: 887 YEDETIPVFLLSTKAGGFGINLVCANNVIIFDQSFNPHDDKQAEDRAHRVGQTKE----- 941 Query: 162 KRAVFVYYLIAQNTIDELVLQ----RLRTKSTIQD 192 V VY ++ +NTIDE +LQ +L+ ST+ D Sbjct: 942 ---VNVYRMVTKNTIDESILQLALNKLQLDSTVSD 973 >gi|120602191|ref|YP_966591.1| SNF2-related protein [Desulfovibrio vulgaris DP4] gi|304569715|ref|YP_011298.2| Snf2 family protein [Desulfovibrio vulgaris str. Hildenborough] gi|120562420|gb|ABM28164.1| SNF2-related protein [Desulfovibrio vulgaris DP4] gi|311234232|gb|ADP87086.1| SNF2-related protein [Desulfovibrio vulgaris RCH1] Length = 1071 Score = 42.4 bits (98), Expect = 0.034, Method: Compositional matrix adjust. Identities = 24/78 (30%), Positives = 37/78 (47%), Gaps = 6/78 (7%) Query: 105 NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA 164 N IP+ + G GLNL + ++ + WW+ +E R + G R Sbjct: 967 NSPDIPIFLISLKAGGTGLNLT-SADYVIHYDPWWN-----PAVESQATDRTHRIGQTRQ 1020 Query: 165 VFVYYLIAQNTIDELVLQ 182 VF Y LI QNT++E +L+ Sbjct: 1021 VFSYKLICQNTVEEKILK 1038 >gi|46449909|gb|AAS96558.1| Snf2 family protein [Desulfovibrio vulgaris str. Hildenborough] Length = 1055 Score = 42.4 bits (98), Expect = 0.034, Method: Compositional matrix adjust. Identities = 24/78 (30%), Positives = 37/78 (47%), Gaps = 6/78 (7%) Query: 105 NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA 164 N IP+ + G GLNL + ++ + WW+ +E R + G R Sbjct: 951 NSPDIPIFLISLKAGGTGLNLT-SADYVIHYDPWWN-----PAVESQATDRTHRIGQTRQ 1004 Query: 165 VFVYYLIAQNTIDELVLQ 182 VF Y LI QNT++E +L+ Sbjct: 1005 VFSYKLICQNTVEEKILK 1022 >gi|255721613|ref|XP_002545741.1| hypothetical protein CTRG_00522 [Candida tropicalis MYA-3404] gi|240136230|gb|EER35783.1| hypothetical protein CTRG_00522 [Candida tropicalis MYA-3404] Length = 1368 Score = 42.4 bits (98), Expect = 0.034, Method: Compositional matrix adjust. Identities = 25/77 (32%), Positives = 39/77 (50%), Gaps = 6/77 (7%) Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 G GLNL ++ + S W + Q M R + G + V VY L+ +NTI+E Sbjct: 1297 GLGLNLTSADTVIFYDSDWNPTVDAQAM------DRAHRIGQTKVVTVYRLLTKNTIEER 1350 Query: 180 VLQRLRTKSTIQDLLLN 196 + Q+ + K IQ L++N Sbjct: 1351 IRQKAQNKEEIQKLVIN 1367 >gi|119470636|ref|ZP_01613304.1| putative DNA helicase with SNF2 domain [Alteromonadales bacterium TW-7] gi|119446106|gb|EAW27384.1| putative DNA helicase with SNF2 domain [Alteromonadales bacterium TW-7] Length = 1048 Score = 42.4 bits (98), Expect = 0.034, Method: Compositional matrix adjust. Identities = 34/134 (25%), Positives = 55/134 (41%), Gaps = 16/134 (11%) Query: 71 IIVAYHFNSDLARLQKAFPQ---------GRTLDKDPCTIQEWNEGKIPLLFAHPASCGH 121 +I+ F S L + K + G+T +D I E+ GK + + G Sbjct: 901 VIIFSQFTSALDLIAKQLSELDINFSLLTGQTRHRDKV-IDEFTSGKTSVFLISLKAGGT 959 Query: 122 GLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVL 181 GLNL + + F WW+ +E+ R + G VFVY LI ++I++ V Sbjct: 960 GLNLTQADTV-IHFDPWWN-----PAVEKQATDRAYRIGQTNPVFVYKLIMSHSIEQKVF 1013 Query: 182 QRLRTKSTIQDLLL 195 + K + D L Sbjct: 1014 KMQEDKQALVDALF 1027 >gi|242059437|ref|XP_002458864.1| hypothetical protein SORBIDRAFT_03g041720 [Sorghum bicolor] gi|241930839|gb|EES03984.1| hypothetical protein SORBIDRAFT_03g041720 [Sorghum bicolor] Length = 1207 Score = 42.4 bits (98), Expect = 0.034, Method: Compositional matrix adjust. Identities = 29/107 (27%), Positives = 58/107 (54%), Gaps = 14/107 (13%) Query: 100 TIQEWN--EGKIPLLFAHPASCGHGLNLQYGGNILVF---FSLWWDLEEHQQMIERIGVT 154 +I+E+N E +I + + G G++L ++++ F+ + DL+ Q RIG T Sbjct: 905 SIKEYNRAESEIFIFLMSTRAGGLGVDLPGADRVIIYDPDFNPFMDLQA-QARAHRIGQT 963 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 R V VY LI + +++E +LQ+ + K ++++L+N+ K+ Sbjct: 964 R--------PVVVYQLITKCSVEEKILQKSKKKLAVENMLMNSSNKK 1002 >gi|255946938|ref|XP_002564236.1| Pc22g01920 [Penicillium chrysogenum Wisconsin 54-1255] gi|211591253|emb|CAP97480.1| Pc22g01920 [Penicillium chrysogenum Wisconsin 54-1255] Length = 819 Score = 42.4 bits (98), Expect = 0.035, Method: Compositional matrix adjust. Identities = 26/78 (33%), Positives = 40/78 (51%), Gaps = 6/78 (7%) Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 G GLNL G N LV F W+ QQ + R+ + G K+ FVY IA +I+E Sbjct: 653 GCGLNL-IGANRLVLFDPDWNPAADQQALARVW-----RDGQKKDCFVYRFIATGSIEEK 706 Query: 180 VLQRLRTKSTIQDLLLNA 197 + QR K ++ ++++ Sbjct: 707 IFQRQSHKQSLSSCVVDS 724 >gi|50546160|ref|XP_500607.1| YALI0B07513p [Yarrowia lipolytica] gi|49646473|emb|CAG82840.1| YALI0B07513p [Yarrowia lipolytica] Length = 807 Score = 42.4 bits (98), Expect = 0.035, Method: Compositional matrix adjust. Identities = 29/99 (29%), Positives = 47/99 (47%), Gaps = 6/99 (6%) Query: 106 EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 EG+ + + G GLNL G N L+ W+ QQ + R+ + G K+ Sbjct: 632 EGQEFIFLLSSKAGGCGLNL-IGANRLILMDPDWNPAADQQALARVW-----RDGQKKDC 685 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIH 204 FVY LIA TI+E + QR K ++ +++ ++ H Sbjct: 686 FVYRLIATGTIEEKIFQRQSMKQSLSTCVVDEVQDVERH 724 >gi|224070615|ref|XP_002303179.1| chromatin remodeling complex subunit [Populus trichocarpa] gi|222840611|gb|EEE78158.1| chromatin remodeling complex subunit [Populus trichocarpa] Length = 1682 Score = 42.4 bits (98), Expect = 0.035, Method: Compositional matrix adjust. Identities = 32/109 (29%), Positives = 56/109 (51%), Gaps = 8/109 (7%) Query: 91 GRTLDKDPCTI-QEWNEG-KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMI 148 G T +D T+ Q +N KI + S G G+NL G + ++F+ W+ QQ Sbjct: 721 GSTQPEDRQTLMQRFNTNPKIFIFILSTRSGGVGINL-VGADTVIFYDSDWNPAMDQQAQ 779 Query: 149 ERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 +R + G R V +Y LI+++TI+E +L++ K + DL++ + Sbjct: 780 DRC-----HRIGQTREVHIYRLISESTIEENILKKANQKRALDDLVIQS 823 >gi|78356607|ref|YP_388056.1| DEAD/DEAH box helicase-like [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] gi|78219012|gb|ABB38361.1| DEAD/DEAH box helicase-like protein [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] Length = 1068 Score = 42.4 bits (98), Expect = 0.035, Method: Compositional matrix adjust. Identities = 24/87 (27%), Positives = 41/87 (47%), Gaps = 6/87 (6%) Query: 109 IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVY 168 IP+ + G GLNL + ++ + WW+ +E R + G K VF Y Sbjct: 968 IPIFLISLKAGGTGLNLT-SADYVIHYDPWWN-----PAVENQATDRAHRIGQKNQVFAY 1021 Query: 169 YLIAQNTIDELVLQRLRTKSTIQDLLL 195 +I QNT++E +L+ K + D ++ Sbjct: 1022 KMICQNTVEEKILKLQDMKRGVADAII 1048 >gi|291455081|ref|ZP_06594471.1| LOW QUALITY PROTEIN: SNF2/RAD54 family helicase [Streptomyces albus J1074] gi|291358030|gb|EFE84932.1| LOW QUALITY PROTEIN: SNF2/RAD54 family helicase [Streptomyces albus J1074] Length = 690 Score = 42.4 bits (98), Expect = 0.036, Method: Composition-based stats. Identities = 24/97 (24%), Positives = 45/97 (46%), Gaps = 6/97 (6%) Query: 101 IQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 + + EG+ P+L + G GLNL ++ + WW+ +E R + G Sbjct: 577 VDRFQEGRTPVLVLSLKAAGTGLNLTRASHVF-HYDRWWN-----PAVEEQATDRAYRIG 630 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 R V V+ LI + T+++ + + L K + D +L + Sbjct: 631 QTRPVQVHRLITEGTVEDRIAELLTAKRALADAVLGS 667 >gi|239983251|ref|ZP_04705775.1| SNF2/RAD54 family helicase [Streptomyces albus J1074] Length = 616 Score = 42.4 bits (98), Expect = 0.036, Method: Composition-based stats. Identities = 24/97 (24%), Positives = 45/97 (46%), Gaps = 6/97 (6%) Query: 101 IQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 + + EG+ P+L + G GLNL ++ + WW+ +E R + G Sbjct: 503 VDRFQEGRTPVLVLSLKAAGTGLNLTRASHVF-HYDRWWN-----PAVEEQATDRAYRIG 556 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 R V V+ LI + T+++ + + L K + D +L + Sbjct: 557 QTRPVQVHRLITEGTVEDRIAELLTAKRALADAVLGS 593 >gi|146324514|ref|XP_751168.2| dsDNA-dependent ATPase Rad54 [Aspergillus fumigatus Af293] gi|129557284|gb|EAL89130.2| dsDNA-dependent ATPase Rad54, putative [Aspergillus fumigatus Af293] Length = 807 Score = 42.4 bits (98), Expect = 0.036, Method: Compositional matrix adjust. Identities = 26/78 (33%), Positives = 40/78 (51%), Gaps = 6/78 (7%) Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 G GLNL G N LV F W+ QQ + R+ + G K+ FVY IA +I+E Sbjct: 641 GCGLNL-IGANRLVLFDPDWNPAADQQALARVW-----RDGQKKDCFVYRFIATGSIEEK 694 Query: 180 VLQRLRTKSTIQDLLLNA 197 + QR K ++ ++++ Sbjct: 695 IFQRQSHKQSLSSCVVDS 712 >gi|328865915|gb|EGG14301.1| myb domain-containing protein [Dictyostelium fasciculatum] Length = 1343 Score = 42.4 bits (98), Expect = 0.036, Method: Compositional matrix adjust. Identities = 28/93 (30%), Positives = 47/93 (50%), Gaps = 12/93 (12%) Query: 106 EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLE---EHQQMIERIGVTRQRQAGFK 162 + +I L S G GLNL G + ++F+ W+ + Q RIG TR+ Sbjct: 304 DNRIFLFILSTRSGGLGLNL-TGADTVIFYDTDWNPSMDAQAQDRCHRIGQTRE------ 356 Query: 163 RAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 V +Y LI Q+TI+E +L++ K + D+++ Sbjct: 357 --VHIYRLITQHTIEENILKKSNQKRQLDDMVI 387 >gi|289617844|emb|CBI55421.1| unnamed protein product [Sordaria macrospora] Length = 1667 Score = 42.4 bits (98), Expect = 0.036, Method: Compositional matrix adjust. Identities = 26/80 (32%), Positives = 42/80 (52%), Gaps = 6/80 (7%) Query: 118 SCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 + G G+NL ++++ S W + Q M R + G KR V VY L+A+ TI+ Sbjct: 866 AGGLGINLMTADTVIIYDSDWNPQADLQAM------ARAHRIGQKRPVNVYRLVAKQTIE 919 Query: 178 ELVLQRLRTKSTIQDLLLNA 197 E V++R R K ++ L + A Sbjct: 920 EEVVKRARNKLFLEYLTIQA 939 >gi|225560868|gb|EEH09149.1| DNA repair and recombination protein RAD54 [Ajellomyces capsulatus G186AR] Length = 1511 Score = 42.4 bits (98), Expect = 0.036, Method: Compositional matrix adjust. Identities = 26/78 (33%), Positives = 40/78 (51%), Gaps = 6/78 (7%) Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 G G+NL G N LV F W+ QQ + R+ + G K+ FVY IA TI+E Sbjct: 572 GCGINL-IGANRLVLFDPDWNPAADQQALARVW-----RDGQKKDCFVYRFIATGTIEEK 625 Query: 180 VLQRLRTKSTIQDLLLNA 197 + QR K ++ ++++ Sbjct: 626 IFQRQSHKQSLSSCVVDS 643 >gi|68076919|ref|XP_680379.1| DNA helicase [Plasmodium berghei strain ANKA] gi|56501303|emb|CAH95084.1| DNA helicase, putative [Plasmodium berghei] Length = 835 Score = 42.4 bits (98), Expect = 0.037, Method: Composition-based stats. Identities = 33/108 (30%), Positives = 52/108 (48%), Gaps = 12/108 (11%) Query: 94 LDKDPCTIQEW-NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWW---DLEEHQQMIE 149 +DK I+ + ++ KI + +CG GLNL N +VF L+W + + + Sbjct: 629 IDKREIYIKNFQSDEKIRIALLSITACGVGLNLT-AANTVVFGELYWVPGQMIQAEDRAH 687 Query: 150 RIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 RIG T + ++YL+AQNTIDE+V + + K LN Sbjct: 688 RIGTTHD-------TINIHYLVAQNTIDEVVWKIINRKWNTLTTALNG 728 >gi|294660619|ref|NP_853484.2| SNF2 family helicase [Mycoplasma gallisepticum str. R(low)] gi|284812282|gb|AAP57052.2| SNF2 family helicase [Mycoplasma gallisepticum str. R(low)] gi|284930981|gb|ADC30920.1| SNF2 family helicase [Mycoplasma gallisepticum str. R(high)] gi|284931739|gb|ADC31677.1| SNF2 family helicase [Mycoplasma gallisepticum str. F] Length = 1108 Score = 42.4 bits (98), Expect = 0.037, Method: Compositional matrix adjust. Identities = 26/82 (31%), Positives = 43/82 (52%), Gaps = 7/82 (8%) Query: 101 IQEWNEGKIPLLF-AHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQA 159 + ++N K P +F A + G GLNL G I++ + LWW+L Q R + Sbjct: 999 VNDFNNAKEPAVFIASLKAGGVGLNLT-GAEIVIHYDLWWNLALQNQ-----ATDRAHRI 1052 Query: 160 GFKRAVFVYYLIAQNTIDELVL 181 G + + VY +IA +TI+E ++ Sbjct: 1053 GQRNHLQVYRIIAADTIEERIV 1074 >gi|317031306|ref|XP_001393160.2| DNA repair protein rhp54 [Aspergillus niger CBS 513.88] Length = 813 Score = 42.4 bits (98), Expect = 0.037, Method: Compositional matrix adjust. Identities = 26/78 (33%), Positives = 40/78 (51%), Gaps = 6/78 (7%) Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 G GLNL G N LV F W+ QQ + R+ + G K+ FVY IA +I+E Sbjct: 647 GCGLNL-IGANRLVLFDPDWNPAADQQALARVW-----RDGQKKDCFVYRFIATGSIEEK 700 Query: 180 VLQRLRTKSTIQDLLLNA 197 + QR K ++ ++++ Sbjct: 701 IFQRQSHKQSLSSCVVDS 718 >gi|298711307|emb|CBJ26552.1| DNA repair and recombination protein RAD54 homolog [Ectocarpus siliculosus] Length = 1510 Score = 42.4 bits (98), Expect = 0.037, Method: Composition-based stats. Identities = 27/75 (36%), Positives = 40/75 (53%), Gaps = 6/75 (8%) Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 G GLNL GGN LV F W+ +Q R+ + G K+ FVY ++ TI+E Sbjct: 645 GCGLNL-IGGNRLVLFDPDWNPAVDKQAAARVW-----RDGQKKRCFVYRFVSTGTIEEK 698 Query: 180 VLQRLRTKSTIQDLL 194 V QR +K +Q+++ Sbjct: 699 VFQRQLSKEGLQNIV 713 >gi|297195014|ref|ZP_06912412.1| helicase [Streptomyces pristinaespiralis ATCC 25486] gi|297152588|gb|EDY65843.2| helicase [Streptomyces pristinaespiralis ATCC 25486] Length = 969 Score = 42.4 bits (98), Expect = 0.038, Method: Composition-based stats. Identities = 33/150 (22%), Positives = 65/150 (43%), Gaps = 20/150 (13%) Query: 59 LEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD------PCTIQE-----WNEG 107 LE I+ + + + Y +ARL A R + P T +E + G Sbjct: 806 LETILSEDGSVLVFTQY---VSMARLLSAHLTSRAIPSQLLHGGTPITERERMVDRFQSG 862 Query: 108 KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFV 167 ++P+ + G GLNL G++ + + WW+ +E R + G + V V Sbjct: 863 EVPVFILSLKAAGTGLNLTRAGHV-IHYDRWWN-----PAVEEQATDRAYRIGQTQPVQV 916 Query: 168 YYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + L+ + T+++ + + L +K + D +L + Sbjct: 917 HRLVTEGTVEDRIAEMLASKRALADAVLGS 946 >gi|218191385|gb|EEC73812.1| hypothetical protein OsI_08529 [Oryza sativa Indica Group] Length = 1765 Score = 42.4 bits (98), Expect = 0.038, Method: Compositional matrix adjust. Identities = 24/78 (30%), Positives = 43/78 (55%), Gaps = 6/78 (7%) Query: 118 SCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 S G G+NL G + ++F+ W+ QQ +R + G R V +Y LI+++TI+ Sbjct: 877 SGGVGINL-VGADTVIFYDSDWNPAMDQQAQDRC-----HRIGQTREVHIYRLISESTIE 930 Query: 178 ELVLQRLRTKSTIQDLLL 195 E +L++ K + DL++ Sbjct: 931 ENILKKANQKRALDDLVI 948 >gi|222619629|gb|EEE55761.1| hypothetical protein OsJ_04298 [Oryza sativa Japonica Group] Length = 1129 Score = 42.4 bits (98), Expect = 0.038, Method: Compositional matrix adjust. Identities = 26/86 (30%), Positives = 48/86 (55%), Gaps = 12/86 (13%) Query: 120 GHGLNLQYGGNILVF---FSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTI 176 G G++L ++++ F+ + DL+ Q RIG TR V VY LI + ++ Sbjct: 903 GMGVDLPGADRVIIYDPDFNPFMDLQA-QSRAHRIGQTR--------PVVVYQLITKCSV 953 Query: 177 DELVLQRLRTKSTIQDLLLNALKKET 202 +E +LQ+ + K I+++L+N+ KK + Sbjct: 954 EEKILQKSKQKLAIENMLMNSSKKPS 979 >gi|115441433|ref|NP_001044996.1| Os01g0881000 [Oryza sativa Japonica Group] gi|56784632|dbj|BAD81679.1| putative chromatin remodeling factor CHD3 [Oryza sativa Japonica Group] gi|113534527|dbj|BAF06910.1| Os01g0881000 [Oryza sativa Japonica Group] Length = 1150 Score = 42.4 bits (98), Expect = 0.038, Method: Compositional matrix adjust. Identities = 26/86 (30%), Positives = 48/86 (55%), Gaps = 12/86 (13%) Query: 120 GHGLNLQYGGNILVF---FSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTI 176 G G++L ++++ F+ + DL+ Q RIG TR V VY LI + ++ Sbjct: 924 GMGVDLPGADRVIIYDPDFNPFMDLQA-QSRAHRIGQTR--------PVVVYQLITKCSV 974 Query: 177 DELVLQRLRTKSTIQDLLLNALKKET 202 +E +LQ+ + K I+++L+N+ KK + Sbjct: 975 EEKILQKSKQKLAIENMLMNSSKKPS 1000 >gi|310766267|gb|ADP11217.1| SWI/SNF-like matrix-associated actin-dependent regulator of chromatin subfamily A member 5 [Erwinia sp. Ejp617] Length = 852 Score = 42.4 bits (98), Expect = 0.038, Method: Compositional matrix adjust. Identities = 27/106 (25%), Positives = 53/106 (50%), Gaps = 7/106 (6%) Query: 91 GRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 G T D++ ++ + +G++P+ + G GLNL + ++ + WW+ Q +R Sbjct: 734 GATRDRNE-PVRSFQQGEVPVFLISLKAGGVGLNLT-AADTVIHYDPWWNPAAENQATDR 791 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + G + VFVY LIA TI+E ++ + K+ + +L+ Sbjct: 792 AW-----RLGQDKPVFVYKLIAAGTIEEKIVALQQQKAELAGEILD 832 >gi|294812014|ref|ZP_06770657.1| SNF2/RAD54 family helicase [Streptomyces clavuligerus ATCC 27064] gi|326440261|ref|ZP_08214995.1| helicase [Streptomyces clavuligerus ATCC 27064] gi|294324613|gb|EFG06256.1| SNF2/RAD54 family helicase [Streptomyces clavuligerus ATCC 27064] Length = 986 Score = 42.4 bits (98), Expect = 0.038, Method: Composition-based stats. Identities = 24/97 (24%), Positives = 45/97 (46%), Gaps = 6/97 (6%) Query: 101 IQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 + + G+IP+ + G GLNL G++ + + WW+ +E R + G Sbjct: 873 VDRFQSGEIPVFVLSLKAAGTGLNLTRAGHV-IHYDRWWN-----PAVEEQATDRAYRIG 926 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 R V V+ LI + T+++ + L K + D +L + Sbjct: 927 QTRPVQVHRLITEGTVEDRIAGMLAAKRALADAVLGS 963 >gi|289618348|emb|CBI55072.1| unnamed protein product [Sordaria macrospora] Length = 972 Score = 42.4 bits (98), Expect = 0.038, Method: Compositional matrix adjust. Identities = 29/90 (32%), Positives = 39/90 (43%), Gaps = 15/90 (16%) Query: 92 RTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERI 151 R LD DP T +L A C GLNL N ++ WW Q ++R+ Sbjct: 861 RALDYDPNTR---------ILLASLGVCSVGLNL-VSANTVILADSWWAPAIEDQAVDRV 910 Query: 152 GVTRQRQAGFKRAVFVYYLIAQNTIDELVL 181 + G R VY L+ +NTI+E VL Sbjct: 911 -----HRLGQTRETNVYRLVMENTIEERVL 935 >gi|254391562|ref|ZP_05006762.1| SNF2/RAD54 family helicase [Streptomyces clavuligerus ATCC 27064] gi|197705249|gb|EDY51061.1| SNF2/RAD54 family helicase [Streptomyces clavuligerus ATCC 27064] Length = 754 Score = 42.4 bits (98), Expect = 0.038, Method: Composition-based stats. Identities = 24/97 (24%), Positives = 45/97 (46%), Gaps = 6/97 (6%) Query: 101 IQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 + + G+IP+ + G GLNL G++ + + WW+ +E R + G Sbjct: 641 VDRFQSGEIPVFVLSLKAAGTGLNLTRAGHV-IHYDRWWN-----PAVEEQATDRAYRIG 694 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 R V V+ LI + T+++ + L K + D +L + Sbjct: 695 QTRPVQVHRLITEGTVEDRIAGMLAAKRALADAVLGS 731 >gi|317484825|ref|ZP_07943719.1| SNF2 family domain-containing protein [Bilophila wadsworthia 3_1_6] gi|316923919|gb|EFV45111.1| SNF2 family domain-containing protein [Bilophila wadsworthia 3_1_6] Length = 1073 Score = 42.4 bits (98), Expect = 0.039, Method: Compositional matrix adjust. Identities = 24/91 (26%), Positives = 43/91 (47%), Gaps = 6/91 (6%) Query: 105 NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA 164 N +IP+ + G G+NL + ++ + WW+ +E R + G R Sbjct: 969 NSPEIPIFLISLKAGGTGINLT-SADYVIHYDPWWN-----PAVESQATDRTHRIGQTRQ 1022 Query: 165 VFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 VF Y LI QNT++E +L+ K + + ++ Sbjct: 1023 VFSYKLICQNTVEEKILKLQEMKRGVAEAVI 1053 >gi|283476853|emb|CAY72692.1| SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 [Erwinia pyrifoliae DSM 12163] Length = 852 Score = 42.4 bits (98), Expect = 0.039, Method: Compositional matrix adjust. Identities = 27/106 (25%), Positives = 53/106 (50%), Gaps = 7/106 (6%) Query: 91 GRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 G T D++ ++ + +G++P+ + G GLNL + ++ + WW+ Q +R Sbjct: 734 GATRDRNE-PVRSFQQGEVPVFLISLKAGGVGLNL-TAADTVIHYDPWWNPAAENQATDR 791 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + G + VFVY LIA TI+E ++ + K+ + +L+ Sbjct: 792 AW-----RLGQDKPVFVYKLIAAGTIEEKIVALQQQKAELAGEILD 832 >gi|308807292|ref|XP_003080957.1| DNA repair protein RAD54-like (ISS) [Ostreococcus tauri] gi|116059418|emb|CAL55125.1| DNA repair protein RAD54-like (ISS) [Ostreococcus tauri] Length = 816 Score = 42.4 bits (98), Expect = 0.039, Method: Compositional matrix adjust. Identities = 32/108 (29%), Positives = 54/108 (50%), Gaps = 12/108 (11%) Query: 91 GRTLDKDPCTIQEWNEGK----IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 G T+ K ++E+N+ + LL + CG +NL GGN LV F W+ +Q Sbjct: 593 GTTIGKRQKLVKEFNDPTSNSFVFLLSSKAGGCG--INL-IGGNRLVLFDPDWNPANDKQ 649 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 R + G K+ ++Y +A TI+E V QR +K ++Q+++ Sbjct: 650 -----AAARCWRDGQKKKCYLYRFLAAGTIEEKVFQRQLSKESLQNVV 692 >gi|38637850|ref|NP_942824.1| helicase superfamily protein II [Ralstonia eutropha H16] gi|32527188|gb|AAP85938.1| putative helicase, superfamily II [Ralstonia eutropha H16] Length = 1106 Score = 42.4 bits (98), Expect = 0.039, Method: Composition-based stats. Identities = 22/96 (22%), Positives = 47/96 (48%), Gaps = 6/96 (6%) Query: 101 IQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 ++ + +G++PL + G GLNL + ++ + WW+ +E R + G Sbjct: 976 VERFQQGEVPLFLISLKAGGVGLNLT-AADTVIHYDPWWN-----PAVENQATDRAHRLG 1029 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + VFVY LI +++E ++ K+ + + +L+ Sbjct: 1030 QDKPVFVYKLITGGSVEEKIVAMQAQKAALAEAILS 1065 >gi|307323253|ref|ZP_07602463.1| SNF2-related protein [Streptomyces violaceusniger Tu 4113] gi|306890742|gb|EFN21718.1| SNF2-related protein [Streptomyces violaceusniger Tu 4113] Length = 978 Score = 42.4 bits (98), Expect = 0.040, Method: Composition-based stats. Identities = 23/97 (23%), Positives = 48/97 (49%), Gaps = 6/97 (6%) Query: 101 IQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 ++ + +G++P+ + G GLNL G++ V + WW+ +E R + G Sbjct: 864 VRSFQDGEVPVFLLSLKAAGTGLNLTRAGHV-VHYDRWWN-----PAVEAQATDRAYRIG 917 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + V V+ +IA+ T+++ + L K + D +L + Sbjct: 918 QTQPVQVHRIIAEGTVEDRIAAMLTRKQELADAVLGS 954 >gi|218189474|gb|EEC71901.1| hypothetical protein OsI_04668 [Oryza sativa Indica Group] Length = 1105 Score = 42.4 bits (98), Expect = 0.040, Method: Compositional matrix adjust. Identities = 26/86 (30%), Positives = 48/86 (55%), Gaps = 12/86 (13%) Query: 120 GHGLNLQYGGNILVF---FSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTI 176 G G++L ++++ F+ + DL+ Q RIG TR V VY LI + ++ Sbjct: 908 GMGVDLPGADRVIIYDPDFNPFMDLQA-QSRAHRIGQTR--------PVVVYQLITKCSV 958 Query: 177 DELVLQRLRTKSTIQDLLLNALKKET 202 +E +LQ+ + K I+++L+N+ KK + Sbjct: 959 EEKILQKSKQKLAIENMLMNSSKKPS 984 >gi|290962297|ref|YP_003493479.1| hypothetical protein SCAB_79891 [Streptomyces scabiei 87.22] gi|260651823|emb|CBG74949.1| putative helicase (fragment) [Streptomyces scabiei 87.22] Length = 953 Score = 42.4 bits (98), Expect = 0.040, Method: Composition-based stats. Identities = 25/95 (26%), Positives = 46/95 (48%), Gaps = 6/95 (6%) Query: 101 IQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 ++ + G++P+ + G GLNL ++ V + WW+ +E R + G Sbjct: 839 VERFQAGEVPVFLLSLKAAGTGLNLTRAEHV-VHYDRWWN-----PAVEAQATDRAYRIG 892 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 R V V+ LIA+ TI++ + L +K + D +L Sbjct: 893 QTRPVQVHRLIAEGTIEDRIADMLLSKRKLADAVL 927 >gi|213625823|gb|AAI71410.1| Helicase, lymphoid-specific [Danio rerio] gi|213627472|gb|AAI71408.1| Helicase, lymphoid-specific [Danio rerio] gi|220677979|emb|CAX14759.1| helicase, lymphoid-specific [Danio rerio] Length = 853 Score = 42.4 bits (98), Expect = 0.040, Method: Compositional matrix adjust. Identities = 30/104 (28%), Positives = 50/104 (48%), Gaps = 12/104 (11%) Query: 95 DKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLW---WDLEEHQQMIERI 151 D+D + ++ ++ L + G G+NL +++F S W DL+ Q RI Sbjct: 669 DRDENMKKFSSDPEVFLFLLSTRAGGLGINLTSADTVIIFDSDWNPQADLQ-AQDRCHRI 727 Query: 152 GVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 G T+ V VY LI NTIDE +L+R K ++ +++ Sbjct: 728 GQTK--------PVVVYRLITANTIDEKILERASAKRKLEKMVI 763 >gi|134077689|emb|CAK45729.1| unnamed protein product [Aspergillus niger] Length = 846 Score = 42.4 bits (98), Expect = 0.040, Method: Compositional matrix adjust. Identities = 26/78 (33%), Positives = 40/78 (51%), Gaps = 6/78 (7%) Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 G GLNL G N LV F W+ QQ + R+ + G K+ FVY IA +I+E Sbjct: 680 GCGLNL-IGANRLVLFDPDWNPAADQQALARVW-----RDGQKKDCFVYRFIATGSIEEK 733 Query: 180 VLQRLRTKSTIQDLLLNA 197 + QR K ++ ++++ Sbjct: 734 IFQRQSHKQSLSSCVVDS 751 >gi|259907055|ref|YP_002647411.1| Putative helicase [Erwinia pyrifoliae Ep1/96] gi|224962677|emb|CAX54132.1| Putative helicase [Erwinia pyrifoliae Ep1/96] Length = 883 Score = 42.4 bits (98), Expect = 0.041, Method: Compositional matrix adjust. Identities = 27/106 (25%), Positives = 53/106 (50%), Gaps = 7/106 (6%) Query: 91 GRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 G T D++ ++ + +G++P+ + G GLNL + ++ + WW+ Q +R Sbjct: 765 GATRDRNE-PVRSFQQGEVPVFLISLKAGGVGLNLT-AADTVIHYDPWWNPAAENQATDR 822 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + G + VFVY LIA TI+E ++ + K+ + +L+ Sbjct: 823 AW-----RLGQDKPVFVYKLIAAGTIEEKIVALQQQKAELAGEILD 863 >gi|261157174|gb|ACX54781.1| DEAD/DEAH box helicase domain-containing protein PIE1 [Oryza sativa Japonica Group] Length = 2044 Score = 42.4 bits (98), Expect = 0.041, Method: Compositional matrix adjust. Identities = 24/78 (30%), Positives = 43/78 (55%), Gaps = 6/78 (7%) Query: 118 SCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 S G G+NL G + ++F+ W+ QQ +R + G R V +Y LI+++TI+ Sbjct: 1156 SGGVGINL-VGADTVIFYDSDWNPAMDQQAQDRC-----HRIGQTREVHIYRLISESTIE 1209 Query: 178 ELVLQRLRTKSTIQDLLL 195 E +L++ K + DL++ Sbjct: 1210 ENILKKANQKRALDDLVI 1227 >gi|295664715|ref|XP_002792909.1| SNF2 family N-terminal domain containing protein [Paracoccidioides brasiliensis Pb01] gi|226278430|gb|EEH33996.1| SNF2 family N-terminal domain containing protein [Paracoccidioides brasiliensis Pb01] Length = 682 Score = 42.4 bits (98), Expect = 0.041, Method: Compositional matrix adjust. Identities = 28/92 (30%), Positives = 45/92 (48%), Gaps = 6/92 (6%) Query: 106 EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 EG+ + + G G+NL G N LV F W+ QQ + R+ + G K+ Sbjct: 502 EGEEFVFLLSSKAGGCGINL-IGANRLVLFDPDWNPAADQQALARVW-----RDGQKKDC 555 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 FVY IA TI+E + QR K ++ ++++ Sbjct: 556 FVYRFIATGTIEEKIFQRQSHKQSLSSCVVDS 587 >gi|159154987|gb|AAI54480.1| Hells protein [Danio rerio] Length = 290 Score = 42.4 bits (98), Expect = 0.041, Method: Compositional matrix adjust. Identities = 30/104 (28%), Positives = 50/104 (48%), Gaps = 12/104 (11%) Query: 95 DKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLW---WDLEEHQQMIERI 151 D+D + ++ ++ L + G G+NL +++F S W DL+ Q RI Sbjct: 106 DRDENMKKFSSDPEVFLFLLSTRAGGLGINLTSADTVIIFDSDWNPQADLQ-AQDRCHRI 164 Query: 152 GVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 G T+ V VY LI NTIDE +L+R K ++ +++ Sbjct: 165 GQTK--------PVVVYRLITANTIDEKILERASAKRKLEKMVI 200 >gi|154277928|ref|XP_001539795.1| DNA repair and recombination protein RAD54 [Ajellomyces capsulatus NAm1] gi|150413380|gb|EDN08763.1| DNA repair and recombination protein RAD54 [Ajellomyces capsulatus NAm1] Length = 684 Score = 42.4 bits (98), Expect = 0.041, Method: Compositional matrix adjust. Identities = 26/78 (33%), Positives = 40/78 (51%), Gaps = 6/78 (7%) Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 G G+NL G N LV F W+ QQ + R+ + G K+ FVY IA TI+E Sbjct: 518 GCGINL-IGANRLVLFDPDWNPAADQQALARVW-----RDGQKKDCFVYRFIATGTIEEK 571 Query: 180 VLQRLRTKSTIQDLLLNA 197 + QR K ++ ++++ Sbjct: 572 IFQRQSHKQSLSSCVVDS 589 >gi|297599769|ref|NP_001047786.2| Os02g0689800 [Oryza sativa Japonica Group] gi|255671175|dbj|BAF09700.2| Os02g0689800 [Oryza sativa Japonica Group] Length = 1059 Score = 42.4 bits (98), Expect = 0.042, Method: Compositional matrix adjust. Identities = 24/78 (30%), Positives = 43/78 (55%), Gaps = 6/78 (7%) Query: 118 SCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 S G G+NL G + ++F+ W+ QQ +R + G R V +Y LI+++TI+ Sbjct: 171 SGGVGINL-VGADTVIFYDSDWNPAMDQQAQDRC-----HRIGQTREVHIYRLISESTIE 224 Query: 178 ELVLQRLRTKSTIQDLLL 195 E +L++ K + DL++ Sbjct: 225 ENILKKANQKRALDDLVI 242 >gi|164427331|ref|XP_963868.2| hypothetical protein NCU03060 [Neurospora crassa OR74A] gi|157071698|gb|EAA34632.2| hypothetical protein NCU03060 [Neurospora crassa OR74A] Length = 1664 Score = 42.4 bits (98), Expect = 0.042, Method: Compositional matrix adjust. Identities = 26/80 (32%), Positives = 42/80 (52%), Gaps = 6/80 (7%) Query: 118 SCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 + G G+NL ++++ S W + Q M R + G KR V VY L+A+ TI+ Sbjct: 863 AGGLGINLMTADTVIIYDSDWNPQADLQAM------ARAHRIGQKRPVNVYRLVAKQTIE 916 Query: 178 ELVLQRLRTKSTIQDLLLNA 197 E V++R R K ++ L + A Sbjct: 917 EEVVKRARNKLFLEYLTIQA 936 >gi|170032260|ref|XP_001844000.1| DNA repair and recombination protein RAD54 [Culex quinquefasciatus] gi|167872116|gb|EDS35499.1| DNA repair and recombination protein RAD54 [Culex quinquefasciatus] Length = 821 Score = 42.4 bits (98), Expect = 0.043, Method: Compositional matrix adjust. Identities = 43/162 (26%), Positives = 67/162 (41%), Gaps = 44/162 (27%) Query: 59 LEVIIEKANAAPIIVAY-------------HFNSDLARLQKAFPQGRTLDKDPCTIQEWN 105 LE +IE+ +IV+Y H+N RL A P + Sbjct: 565 LEALIERREKV-VIVSYFSKTLDMIAGLCEHYNYKFCRLDGATPS-------------QD 610 Query: 106 EGKIPLLFAHPAS-----------CGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 GK+ F +P+S G GLNL G + LV F W+ Q + RI Sbjct: 611 RGKLVATFNNPSSDIFIFLLSAKAGGIGLNL-VGASRLVLFDNDWNPASDLQAMSRIW-- 667 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + G R VF+Y LI +I+E + QR +K+++ +++ Sbjct: 668 ---RDGQTRNVFIYRLITAFSIEEKIFQRQISKTSLSGSVVD 706 >gi|15896547|ref|NP_349896.1| SNF2 family DNA/RNA helicase [Clostridium acetobutylicum ATCC 824] gi|15026382|gb|AAK81236.1|AE007827_4 Superfamily II DNA/RNA helicases, SNF2 family [Clostridium acetobutylicum ATCC 824] gi|325510706|gb|ADZ22342.1| Superfamily II DNA/RNA helicase, SNF2 family [Clostridium acetobutylicum EA 2018] Length = 1077 Score = 42.4 bits (98), Expect = 0.043, Method: Composition-based stats. Identities = 27/96 (28%), Positives = 47/96 (48%), Gaps = 6/96 (6%) Query: 101 IQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 +Q++NEG + + G GLNL ++++ F WW+ +E R + G Sbjct: 966 VQDFNEGNNSVFLISLKAGGTGLNLT-SADVVIHFDPWWN-----PAVEEQATDRAHRIG 1019 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 K V V L+A+ TI+E +++ K + D LL+ Sbjct: 1020 QKNIVEVIKLVAKGTIEEKIIRLQEEKKRLVDSLLS 1055 >gi|171687883|ref|XP_001908882.1| hypothetical protein [Podospora anserina S mat+] gi|170943903|emb|CAP69555.1| unnamed protein product [Podospora anserina S mat+] Length = 1700 Score = 42.4 bits (98), Expect = 0.043, Method: Compositional matrix adjust. Identities = 26/80 (32%), Positives = 42/80 (52%), Gaps = 6/80 (7%) Query: 118 SCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 + G G+NL ++++ S W + Q M R + G KR V VY L+A+ TI+ Sbjct: 866 AGGLGINLMTADTVIIYDSDWNPQADLQAM------ARAHRIGQKRPVNVYRLVAKQTIE 919 Query: 178 ELVLQRLRTKSTIQDLLLNA 197 E V++R R K ++ L + A Sbjct: 920 EEVVKRARNKLFLEYLTIQA 939 >gi|254567481|ref|XP_002490851.1| DNA-dependent ATPase [Pichia pastoris GS115] gi|238030647|emb|CAY68571.1| DNA-dependent ATPase [Pichia pastoris GS115] gi|328351234|emb|CCA37634.1| DNA repair and recombination protein RAD54B [Pichia pastoris CBS 7435] Length = 840 Score = 42.4 bits (98), Expect = 0.044, Method: Compositional matrix adjust. Identities = 27/86 (31%), Positives = 41/86 (47%), Gaps = 6/86 (6%) Query: 111 LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYL 170 ++ + G GLNL G + L+ F W+ Q + R+ + G KR F+Y L Sbjct: 610 IMLLSSKAGGVGLNL-IGASRLILFDNDWNPSVDIQAMARV-----HRDGQKRHTFIYRL 663 Query: 171 IAQNTIDELVLQRLRTKSTIQDLLLN 196 + TIDE +LQR K + D L+ Sbjct: 664 YTKGTIDEKILQRQLMKQNLSDKFLD 689 >gi|312623213|ref|YP_004024826.1| SNF2-like protein [Caldicellulosiruptor kronotskyensis 2002] gi|312203680|gb|ADQ47007.1| SNF2-related protein [Caldicellulosiruptor kronotskyensis 2002] Length = 1140 Score = 42.0 bits (97), Expect = 0.044, Method: Compositional matrix adjust. Identities = 25/97 (25%), Positives = 47/97 (48%), Gaps = 6/97 (6%) Query: 101 IQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 + +N G+ + + G GLN+ G ++++ F WW+ +E R + G Sbjct: 1031 VNRFNSGERNVFLLSLKAGGFGLNIT-GADVVIHFDAWWN-----PAVENQATARAHRLG 1084 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 K V + +IA+N+I+E +L + K + D L+ A Sbjct: 1085 QKNVVQSFKIIAKNSIEEKILALQQKKKDLFDSLIEA 1121 >gi|297741293|emb|CBI32424.3| unnamed protein product [Vitis vinifera] Length = 1112 Score = 42.0 bits (97), Expect = 0.045, Method: Compositional matrix adjust. Identities = 26/75 (34%), Positives = 40/75 (53%), Gaps = 6/75 (8%) Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 G GLNL GGN LV F W+ +Q R+ + G K+ V++Y ++ TI+E Sbjct: 795 GCGLNL-IGGNRLVLFDPDWNPANDKQAAARVW-----RDGQKKRVYIYRFLSTGTIEEK 848 Query: 180 VLQRLRTKSTIQDLL 194 V QR +K +Q ++ Sbjct: 849 VFQRQMSKEGLQKVI 863 >gi|320589247|gb|EFX01709.1| chromodomain helicase [Grosmannia clavigera kw1407] Length = 1719 Score = 42.0 bits (97), Expect = 0.046, Method: Compositional matrix adjust. Identities = 26/80 (32%), Positives = 42/80 (52%), Gaps = 6/80 (7%) Query: 118 SCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 + G G+NL ++++ S W + Q M R + G KR V VY L+A+ TI+ Sbjct: 862 AGGLGINLMTADTVIIYDSDWNPQADLQAM------ARAHRIGQKRPVNVYRLVAKQTIE 915 Query: 178 ELVLQRLRTKSTIQDLLLNA 197 E V++R R K ++ L + A Sbjct: 916 EEVVKRARNKLFLEYLTIQA 935 >gi|318081201|ref|ZP_07988533.1| helicase [Streptomyces sp. SA3_actF] Length = 770 Score = 42.0 bits (97), Expect = 0.046, Method: Composition-based stats. Identities = 26/105 (24%), Positives = 48/105 (45%), Gaps = 6/105 (5%) Query: 91 GRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 G +D + + G +P+L + G GLNL G++ V + WW+ +E Sbjct: 646 GTPVDARDQLVDRFQSGALPVLVLSLKAAGTGLNLTRAGHV-VHYDRWWN-----PAVED 699 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 R + G R V V+ L+A+ T+++ + + K + D +L Sbjct: 700 QATDRAHRIGQTRHVQVHRLLAEGTVEDRIADLVAGKQALADAVL 744 >gi|318057744|ref|ZP_07976467.1| helicase [Streptomyces sp. SA3_actG] Length = 939 Score = 42.0 bits (97), Expect = 0.046, Method: Composition-based stats. Identities = 26/105 (24%), Positives = 48/105 (45%), Gaps = 6/105 (5%) Query: 91 GRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 G +D + + G +P+L + G GLNL G++ V + WW+ +E Sbjct: 815 GTPVDARDQLVDRFQSGALPVLVLSLKAAGTGLNLTRAGHV-VHYDRWWN-----PAVED 868 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 R + G R V V+ L+A+ T+++ + + K + D +L Sbjct: 869 QATDRAHRIGQTRHVQVHRLLAEGTVEDRIADLVAGKQALADAVL 913 >gi|222623475|gb|EEE57607.1| hypothetical protein OsJ_07989 [Oryza sativa Japonica Group] Length = 2104 Score = 42.0 bits (97), Expect = 0.047, Method: Compositional matrix adjust. Identities = 24/78 (30%), Positives = 43/78 (55%), Gaps = 6/78 (7%) Query: 118 SCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 S G G+NL G + ++F+ W+ QQ +R + G R V +Y LI+++TI+ Sbjct: 1216 SGGVGINL-VGADTVIFYDSDWNPAMDQQAQDRC-----HRIGQTREVHIYRLISESTIE 1269 Query: 178 ELVLQRLRTKSTIQDLLL 195 E +L++ K + DL++ Sbjct: 1270 ENILKKANQKRALDDLVI 1287 >gi|41052809|dbj|BAD07677.1| putative photoperiod independent early flowering1 [Oryza sativa Japonica Group] Length = 2021 Score = 42.0 bits (97), Expect = 0.047, Method: Compositional matrix adjust. Identities = 24/78 (30%), Positives = 43/78 (55%), Gaps = 6/78 (7%) Query: 118 SCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 S G G+NL G + ++F+ W+ QQ +R + G R V +Y LI+++TI+ Sbjct: 1133 SGGVGINL-VGADTVIFYDSDWNPAMDQQAQDRC-----HRIGQTREVHIYRLISESTIE 1186 Query: 178 ELVLQRLRTKSTIQDLLL 195 E +L++ K + DL++ Sbjct: 1187 ENILKKANQKRALDDLVI 1204 >gi|222528487|ref|YP_002572369.1| non-specific serine/threonine protein kinase [Caldicellulosiruptor bescii DSM 6725] gi|222455334|gb|ACM59596.1| Non-specific serine/threonine protein kinase [Caldicellulosiruptor bescii DSM 6725] Length = 1139 Score = 42.0 bits (97), Expect = 0.047, Method: Compositional matrix adjust. Identities = 25/97 (25%), Positives = 47/97 (48%), Gaps = 6/97 (6%) Query: 101 IQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 + +N G+ + + G GLN+ G ++++ F WW+ +E R + G Sbjct: 1031 VNRFNSGERNVFLLSLKAGGFGLNIT-GADVVIHFDAWWN-----PAVENQATARAHRLG 1084 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 K V + +IA+N+I+E +L + K + D L+ A Sbjct: 1085 QKNVVQSFKIIAKNSIEEKILALQQKKKDLFDSLIEA 1121 >gi|144369229|dbj|BAF56217.1| OsRad54 [Oryza sativa Japonica Group] Length = 980 Score = 42.0 bits (97), Expect = 0.048, Method: Compositional matrix adjust. Identities = 25/75 (33%), Positives = 40/75 (53%), Gaps = 6/75 (8%) Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 G GLNL GGN L+ F W+ +Q R+ + G K+ V++Y ++ TI+E Sbjct: 670 GCGLNL-VGGNRLILFDPDWNPANDKQAAARVW-----RDGQKKRVYIYRFLSTGTIEEK 723 Query: 180 VLQRLRTKSTIQDLL 194 V QR +K +Q ++ Sbjct: 724 VYQRQMSKEGLQKVI 738 >gi|237744605|ref|ZP_04575086.1| SWF/SNF family helicase [Fusobacterium sp. 7_1] gi|229431834|gb|EEO42046.1| SWF/SNF family helicase [Fusobacterium sp. 7_1] Length = 1088 Score = 42.0 bits (97), Expect = 0.049, Method: Compositional matrix adjust. Identities = 23/95 (24%), Positives = 44/95 (46%), Gaps = 6/95 (6%) Query: 101 IQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 ++++ +PL + G GLNL ++++ WW++ Q R + G Sbjct: 978 VEDFQNEAVPLFLISLKAGGTGLNLT-KASVVIHLDPWWNISAQNQ-----ATDRAHRIG 1031 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 + V V+ LI +NTI+E +L K + D+ + Sbjct: 1032 QEDTVQVFNLITKNTIEEKILNLQNKKKELSDIFV 1066 >gi|159130376|gb|EDP55489.1| dsDNA-dependent ATPase Rad54, putative [Aspergillus fumigatus A1163] Length = 681 Score = 42.0 bits (97), Expect = 0.049, Method: Compositional matrix adjust. Identities = 26/78 (33%), Positives = 40/78 (51%), Gaps = 6/78 (7%) Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 G GLNL G N LV F W+ QQ + R+ + G K+ FVY IA +I+E Sbjct: 515 GCGLNL-IGANRLVLFDPDWNPAADQQALARVW-----RDGQKKDCFVYRFIATGSIEEK 568 Query: 180 VLQRLRTKSTIQDLLLNA 197 + QR K ++ ++++ Sbjct: 569 IFQRQSHKQSLSSCVVDS 586 >gi|121700154|ref|XP_001268342.1| SNF2 family N-terminal domain protein [Aspergillus clavatus NRRL 1] gi|119396484|gb|EAW06916.1| SNF2 family N-terminal domain protein [Aspergillus clavatus NRRL 1] Length = 682 Score = 42.0 bits (97), Expect = 0.049, Method: Compositional matrix adjust. Identities = 26/78 (33%), Positives = 40/78 (51%), Gaps = 6/78 (7%) Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 G GLNL G N LV F W+ QQ + R+ + G K+ FVY IA +I+E Sbjct: 516 GCGLNL-IGANRLVLFDPDWNPAADQQALARVW-----RDGQKKDCFVYRFIATGSIEEK 569 Query: 180 VLQRLRTKSTIQDLLLNA 197 + QR K ++ ++++ Sbjct: 570 IFQRQSHKQSLSSCVVDS 587 >gi|195569689|ref|XP_002102841.1| GD20115 [Drosophila simulans] gi|194198768|gb|EDX12344.1| GD20115 [Drosophila simulans] Length = 264 Score = 42.0 bits (97), Expect = 0.049, Method: Compositional matrix adjust. Identities = 24/69 (34%), Positives = 39/69 (56%), Gaps = 11/69 (15%) Query: 132 LVFFSLWWDLEEHQQMIER---IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKS 188 ++F+ W+ QQ ++R +G T+Q V VY LI + TI+E +LQR R KS Sbjct: 15 VIFYDSDWNPTVDQQAMDRAHRLGQTKQ--------VTVYRLICKGTIEERILQRAREKS 66 Query: 189 TIQDLLLNA 197 IQ ++++ Sbjct: 67 EIQRMVISG 75 >gi|238487360|ref|XP_002374918.1| dsDNA-dependent ATPase Rad54, putative [Aspergillus flavus NRRL3357] gi|220699797|gb|EED56136.1| dsDNA-dependent ATPase Rad54, putative [Aspergillus flavus NRRL3357] Length = 682 Score = 42.0 bits (97), Expect = 0.050, Method: Compositional matrix adjust. Identities = 26/78 (33%), Positives = 40/78 (51%), Gaps = 6/78 (7%) Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 G GLNL G N LV F W+ QQ + R+ + G K+ FVY IA +I+E Sbjct: 516 GCGLNL-IGANRLVLFDPDWNPAADQQALARVW-----RDGQKKDCFVYRFIATGSIEEK 569 Query: 180 VLQRLRTKSTIQDLLLNA 197 + QR K ++ ++++ Sbjct: 570 IFQRQSHKQSLSSCVVDS 587 >gi|156037672|ref|XP_001586563.1| hypothetical protein SS1G_12550 [Sclerotinia sclerotiorum 1980] gi|154697958|gb|EDN97696.1| hypothetical protein SS1G_12550 [Sclerotinia sclerotiorum 1980 UF-70] Length = 938 Score = 42.0 bits (97), Expect = 0.050, Method: Composition-based stats. Identities = 36/128 (28%), Positives = 56/128 (43%), Gaps = 13/128 (10%) Query: 77 FNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFA---HPASCGHGLNLQYGGNILV 133 N RL + PQ + D + +N+ FA S G G+NL G + LV Sbjct: 662 LNLPFLRLDGSTPQAKRQD----LVNTFNKTPASKYFAFLLSAKSGGAGINL-IGASRLV 716 Query: 134 FFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDL 193 F + W+ Q + RI + G KR+V +Y + +DE + QR TK + D Sbjct: 717 LFDVDWNPATDLQAMARI-----HRDGQKRSVKIYRFLMSGGMDEKIYQRQVTKIGLADS 771 Query: 194 LLNALKKE 201 +++ K E Sbjct: 772 VMDGKKNE 779 >gi|67538714|ref|XP_663131.1| hypothetical protein AN5527.2 [Aspergillus nidulans FGSC A4] gi|40743497|gb|EAA62687.1| hypothetical protein AN5527.2 [Aspergillus nidulans FGSC A4] Length = 1776 Score = 42.0 bits (97), Expect = 0.050, Method: Compositional matrix adjust. Identities = 26/78 (33%), Positives = 40/78 (51%), Gaps = 6/78 (7%) Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 G GLNL G N LV F W+ QQ + R+ + G K+ FVY IA +I+E Sbjct: 667 GCGLNL-IGANRLVLFDPDWNPAADQQALARVW-----RDGQKKDCFVYRFIATGSIEEK 720 Query: 180 VLQRLRTKSTIQDLLLNA 197 + QR K ++ ++++ Sbjct: 721 IFQRQSHKQSLSSCVVDS 738 >gi|317058831|ref|ZP_07923316.1| SWF/SNF family helicase [Fusobacterium sp. 3_1_5R] gi|313684507|gb|EFS21342.1| SWF/SNF family helicase [Fusobacterium sp. 3_1_5R] Length = 1009 Score = 42.0 bits (97), Expect = 0.050, Method: Compositional matrix adjust. Identities = 29/102 (28%), Positives = 45/102 (44%), Gaps = 6/102 (5%) Query: 91 GRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 G T D+ + K + + G GLNL I ++ WW+ + +E Sbjct: 890 GSTKDRQQLVNKFQKNEKYKVFVMTLKTGGVGLNLTAADTIFIY-DPWWN-----KTVEN 943 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQD 192 + R + G R VF Y LI ++TI+E +LQ KS + D Sbjct: 944 QAIDRAYRLGQDRTVFSYKLILKDTIEEKILQLQELKSKLLD 985 >gi|256027374|ref|ZP_05441208.1| SWF/SNF family helicase [Fusobacterium sp. D11] gi|289765340|ref|ZP_06524718.1| SWF/SNF family helicase [Fusobacterium sp. D11] gi|289716895|gb|EFD80907.1| SWF/SNF family helicase [Fusobacterium sp. D11] Length = 1088 Score = 42.0 bits (97), Expect = 0.050, Method: Compositional matrix adjust. Identities = 23/95 (24%), Positives = 44/95 (46%), Gaps = 6/95 (6%) Query: 101 IQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 ++++ +PL + G GLNL ++++ WW++ Q R + G Sbjct: 978 VEDFQNEAVPLFLISLKAGGTGLNLT-KASVVIHLDPWWNISAQNQ-----ATDRAHRIG 1031 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 + V V+ LI +NTI+E +L K + D+ + Sbjct: 1032 QEDTVQVFNLITKNTIEEKILNLQNKKKELSDIFV 1066 >gi|315917068|ref|ZP_07913308.1| SWF/SNF family helicase [Fusobacterium gonidiaformans ATCC 25563] gi|313690943|gb|EFS27778.1| SWF/SNF family helicase [Fusobacterium gonidiaformans ATCC 25563] Length = 1143 Score = 42.0 bits (97), Expect = 0.051, Method: Compositional matrix adjust. Identities = 29/102 (28%), Positives = 45/102 (44%), Gaps = 6/102 (5%) Query: 91 GRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 G T D+ + K + + G GLNL I ++ WW+ + +E Sbjct: 1024 GSTKDRQQLVNKFQKNEKYKVFVMTLKTGGVGLNLTAADTIFIY-DPWWN-----KTVEN 1077 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQD 192 + R + G R VF Y LI ++TI+E +LQ KS + D Sbjct: 1078 QAIDRAYRLGQDRTVFSYKLILKDTIEEKILQLQELKSKLLD 1119 >gi|307822478|ref|ZP_07652709.1| SNF2-related protein [Methylobacter tundripaludum SV96] gi|307736082|gb|EFO06928.1| SNF2-related protein [Methylobacter tundripaludum SV96] Length = 1083 Score = 42.0 bits (97), Expect = 0.051, Method: Compositional matrix adjust. Identities = 24/91 (26%), Positives = 45/91 (49%), Gaps = 7/91 (7%) Query: 91 GRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 G+T ++D I+ + G++ + + G GLNL ++++ WW+ Q Sbjct: 963 GQTRNRDEA-IERFKSGEVNVFLISLKAGGVGLNLTEADTVIIY-DPWWNPAAESQ---- 1016 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVL 181 R + G + VFVY LI +NT++E ++ Sbjct: 1017 -AADRAHRIGQDKPVFVYKLITENTVEEKII 1046 >gi|162452831|ref|YP_001615198.1| hypothetical protein sce4555 [Sorangium cellulosum 'So ce 56'] gi|161163413|emb|CAN94718.1| hypothetical protein sce4555 [Sorangium cellulosum 'So ce 56'] Length = 1270 Score = 42.0 bits (97), Expect = 0.051, Method: Composition-based stats. Identities = 24/81 (29%), Positives = 39/81 (48%), Gaps = 6/81 (7%) Query: 101 IQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 ++E+ EG PL + G G+NL N+ + WW+ +E R + G Sbjct: 1137 VREFQEGSAPLFLISLKAGGFGINLTAATNV-IHLDPWWN-----PAVEDQASDRAHRLG 1190 Query: 161 FKRAVFVYYLIAQNTIDELVL 181 +R V +Y L+A TI+E +L Sbjct: 1191 QRRPVTIYRLVALGTIEEKML 1211 >gi|115313218|gb|AAI24095.1| Hells protein [Danio rerio] Length = 769 Score = 42.0 bits (97), Expect = 0.051, Method: Compositional matrix adjust. Identities = 30/104 (28%), Positives = 50/104 (48%), Gaps = 12/104 (11%) Query: 95 DKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLW---WDLEEHQQMIERI 151 D+D + ++ ++ L + G G+NL +++F S W DL+ Q RI Sbjct: 669 DRDENMKKFSSDPEVFLFLLSTRAGGLGINLTSADTVIIFGSDWNPQADLQ-AQDRCHRI 727 Query: 152 GVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 G T+ V VY LI NTIDE +L+R K ++ +++ Sbjct: 728 GQTK--------PVVVYRLITANTIDEKILERASAKRKLEKMVI 763 >gi|257465912|ref|ZP_05630223.1| SWF/SNF family helicase [Fusobacterium gonidiaformans ATCC 25563] Length = 1134 Score = 42.0 bits (97), Expect = 0.052, Method: Compositional matrix adjust. Identities = 29/102 (28%), Positives = 45/102 (44%), Gaps = 6/102 (5%) Query: 91 GRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 G T D+ + K + + G GLNL I ++ WW+ + +E Sbjct: 1015 GSTKDRQQLVNKFQKNEKYKVFVMTLKTGGVGLNLTAADTIFIY-DPWWN-----KTVEN 1068 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQD 192 + R + G R VF Y LI ++TI+E +LQ KS + D Sbjct: 1069 QAIDRAYRLGQDRTVFSYKLILKDTIEEKILQLQELKSKLLD 1110 >gi|257452288|ref|ZP_05617587.1| SWF/SNF family helicase [Fusobacterium sp. 3_1_5R] Length = 1134 Score = 42.0 bits (97), Expect = 0.052, Method: Compositional matrix adjust. Identities = 29/102 (28%), Positives = 45/102 (44%), Gaps = 6/102 (5%) Query: 91 GRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 G T D+ + K + + G GLNL I ++ WW+ + +E Sbjct: 1015 GSTKDRQQLVNKFQKNEKYKVFVMTLKTGGVGLNLTAADTIFIY-DPWWN-----KTVEN 1068 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQD 192 + R + G R VF Y LI ++TI+E +LQ KS + D Sbjct: 1069 QAIDRAYRLGQDRTVFSYKLILKDTIEEKILQLQELKSKLLD 1110 >gi|212542839|ref|XP_002151574.1| chromodomain helicase (Chd1), putative [Penicillium marneffei ATCC 18224] gi|210066481|gb|EEA20574.1| chromodomain helicase (Chd1), putative [Penicillium marneffei ATCC 18224] Length = 1497 Score = 42.0 bits (97), Expect = 0.052, Method: Compositional matrix adjust. Identities = 24/70 (34%), Positives = 37/70 (52%), Gaps = 6/70 (8%) Query: 118 SCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 + G G+NL +++F S W + Q M R + G R V VY L++++TI+ Sbjct: 832 AGGLGINLMTADTVILFDSDWNPQADLQAM------ARAHRIGQTRPVSVYRLVSKDTIE 885 Query: 178 ELVLQRLRTK 187 E VL+R R K Sbjct: 886 EEVLERARNK 895 >gi|194760847|ref|XP_001962644.1| GF14336 [Drosophila ananassae] gi|292630861|sp|B3MMA5|RAD54_DROAN RecName: Full=DNA repair and recombination protein RAD54-like; AltName: Full=Protein okra gi|190616341|gb|EDV31865.1| GF14336 [Drosophila ananassae] Length = 791 Score = 42.0 bits (97), Expect = 0.052, Method: Compositional matrix adjust. Identities = 24/77 (31%), Positives = 40/77 (51%), Gaps = 6/77 (7%) Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 G GLNL G N L F W+ +Q + R+ + G K+ ++Y L+A TI+E Sbjct: 583 GCGLNL-IGANRLFMFDPDWNPANDEQAMARVW-----RDGQKKPCYIYRLVASGTIEEK 636 Query: 180 VLQRLRTKSTIQDLLLN 196 +LQR K ++ +++ Sbjct: 637 ILQRQTHKKSLSSTIID 653 >gi|240274021|gb|EER37539.1| DNA repair and recombination protein RAD5B [Ajellomyces capsulatus H143] Length = 294 Score = 42.0 bits (97), Expect = 0.052, Method: Compositional matrix adjust. Identities = 25/86 (29%), Positives = 40/86 (46%), Gaps = 6/86 (6%) Query: 105 NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA 164 N+ +L A C GLNL N ++ WW IE V R + G KR Sbjct: 187 NDSNCTVLLASLNVCSVGLNL-VAANQVILADSWW-----APAIEDQAVDRVYRLGQKRP 240 Query: 165 VFVYYLIAQNTIDELVLQRLRTKSTI 190 ++ L+ +N+I++ VL + + K T+ Sbjct: 241 TTIWRLVMENSIEDRVLDKQKEKRTL 266 >gi|19115202|ref|NP_594290.1| Rad54 homolog Rhp54 [Schizosaccharomyces pombe 972h-] gi|3123262|sp|P41410|RAD54_SCHPO RecName: Full=DNA repair protein rhp54; AltName: Full=RAD54 homolog 1 gi|2239180|emb|CAB10100.1| Rad54 homolog Rhp54 [Schizosaccharomyces pombe] Length = 852 Score = 42.0 bits (97), Expect = 0.053, Method: Compositional matrix adjust. Identities = 25/77 (32%), Positives = 39/77 (50%), Gaps = 6/77 (7%) Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 G G+NL G N L+ F W+ QQ + R+ + G K+ FVY IA TI+E Sbjct: 691 GCGINL-IGANRLILFDPDWNPAADQQALARVW-----RDGQKKDCFVYRFIATGTIEEK 744 Query: 180 VLQRLRTKSTIQDLLLN 196 + QR K ++ +++ Sbjct: 745 IFQRQSHKQSLSSCVVD 761 >gi|28199206|ref|NP_779520.1| hypothetical protein PD1321 [Xylella fastidiosa Temecula1] gi|182681936|ref|YP_001830096.1| hypothetical protein XfasM23_1406 [Xylella fastidiosa M23] gi|28057312|gb|AAO29169.1| phage-related protein [Xylella fastidiosa Temecula1] gi|182632046|gb|ACB92822.1| hypothetical protein XfasM23_1406 [Xylella fastidiosa M23] gi|307578194|gb|ADN62163.1| hypothetical protein XFLM_00705 [Xylella fastidiosa subsp. fastidiosa GB514] Length = 55 Score = 42.0 bits (97), Expect = 0.054, Method: Composition-based stats. Identities = 17/36 (47%), Positives = 29/36 (80%) Query: 165 VFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKK 200 VF+++++A +T+DELV+ R +K +QDLLL A+K+ Sbjct: 5 VFIHHIVAADTVDELVMVRRESKREVQDLLLEAVKR 40 >gi|452690|emb|CAA82750.1| DNA repair protein [Schizosaccharomyces pombe] Length = 852 Score = 42.0 bits (97), Expect = 0.054, Method: Compositional matrix adjust. Identities = 25/77 (32%), Positives = 39/77 (50%), Gaps = 6/77 (7%) Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 G G+NL G N L+ F W+ QQ + R+ + G K+ FVY IA TI+E Sbjct: 691 GCGINL-IGANRLILFDPDWNPAADQQALARVW-----RDGQKKDCFVYRFIATGTIEEK 744 Query: 180 VLQRLRTKSTIQDLLLN 196 + QR K ++ +++ Sbjct: 745 IFQRQSHKQSLSSCVVD 761 >gi|297807991|ref|XP_002871879.1| hypothetical protein ARALYDRAFT_488814 [Arabidopsis lyrata subsp. lyrata] gi|297317716|gb|EFH48138.1| hypothetical protein ARALYDRAFT_488814 [Arabidopsis lyrata subsp. lyrata] Length = 1061 Score = 42.0 bits (97), Expect = 0.054, Method: Compositional matrix adjust. Identities = 29/105 (27%), Positives = 55/105 (52%), Gaps = 8/105 (7%) Query: 95 DKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIG 152 D+ ++++NE + P + + G GLNLQ I++F S W + QM ++ Sbjct: 747 DQRGVLLKQFNEPESPYFMFLLSTRAGGLGLNLQTADTIIIFDSDW-----NPQM-DQQA 800 Query: 153 VTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 R + G K+ V V+ L++ +I+E++L+R + K I ++ A Sbjct: 801 EDRAHRIGQKKEVRVFVLVSIGSIEEVILERAKQKMGIDAKVIQA 845 >gi|195353657|ref|XP_002043320.1| GM26909 [Drosophila sechellia] gi|194127434|gb|EDW49477.1| GM26909 [Drosophila sechellia] Length = 264 Score = 42.0 bits (97), Expect = 0.054, Method: Compositional matrix adjust. Identities = 24/69 (34%), Positives = 39/69 (56%), Gaps = 11/69 (15%) Query: 132 LVFFSLWWDLEEHQQMIER---IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKS 188 ++F+ W+ QQ ++R +G T+Q V VY LI + TI+E +LQR R KS Sbjct: 15 VIFYDSDWNPTVDQQAMDRAHRLGQTKQ--------VTVYRLICKGTIEERILQRAREKS 66 Query: 189 TIQDLLLNA 197 IQ ++++ Sbjct: 67 EIQRMVISG 75 >gi|111018652|ref|YP_701624.1| helicase [Rhodococcus jostii RHA1] gi|110818182|gb|ABG93466.1| probable helicase [Rhodococcus jostii RHA1] Length = 1070 Score = 42.0 bits (97), Expect = 0.054, Method: Composition-based stats. Identities = 27/97 (27%), Positives = 46/97 (47%), Gaps = 6/97 (6%) Query: 101 IQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 ++E+ EG P+ + G GLNL + WW+ Q ++R + G Sbjct: 962 LREFKEGAAPVFLISLKAGGFGLNLTEADYCFIL-DPWWNPATEAQAVDR-----AHRIG 1015 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 R V VY LIA++TI++ V+ KS + +++A Sbjct: 1016 QTRNVMVYRLIAKDTIEDKVMALKAKKSALFASVMDA 1052 >gi|257463846|ref|ZP_05628233.1| SWF/SNF family helicase [Fusobacterium sp. D12] gi|317061380|ref|ZP_07925865.1| metal dependent hydrolase [Fusobacterium sp. D12] gi|313687056|gb|EFS23891.1| metal dependent hydrolase [Fusobacterium sp. D12] Length = 1134 Score = 42.0 bits (97), Expect = 0.055, Method: Compositional matrix adjust. Identities = 25/75 (33%), Positives = 38/75 (50%), Gaps = 6/75 (8%) Query: 118 SCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 + G GLNL I ++ WW+ + +E + R + G R VF Y LI ++TI+ Sbjct: 1042 TGGVGLNLTAADTIFIY-DPWWN-----KTVENQAIDRAYRLGQDRTVFSYKLILKDTIE 1095 Query: 178 ELVLQRLRTKSTIQD 192 E +LQ KS + D Sbjct: 1096 EKILQLQELKSKLLD 1110 >gi|212534456|ref|XP_002147384.1| dsDNA-dependent ATPase Rad54, putative [Penicillium marneffei ATCC 18224] gi|210069783|gb|EEA23873.1| dsDNA-dependent ATPase Rad54, putative [Penicillium marneffei ATCC 18224] Length = 808 Score = 42.0 bits (97), Expect = 0.055, Method: Compositional matrix adjust. Identities = 25/78 (32%), Positives = 40/78 (51%), Gaps = 6/78 (7%) Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 G G+NL G N LV F W+ QQ + R+ + G K+ FVY IA +I+E Sbjct: 642 GCGINL-IGANRLVLFDPDWNPAADQQALARVW-----RDGQKKDCFVYRFIATGSIEEK 695 Query: 180 VLQRLRTKSTIQDLLLNA 197 + QR K ++ ++++ Sbjct: 696 IFQRQSHKQSLSSCVVDS 713 >gi|302549833|ref|ZP_07302175.1| SNF2/RAD54 family helicase [Streptomyces viridochromogenes DSM 40736] gi|302467451|gb|EFL30544.1| SNF2/RAD54 family helicase [Streptomyces viridochromogenes DSM 40736] Length = 948 Score = 42.0 bits (97), Expect = 0.055, Method: Composition-based stats. Identities = 23/97 (23%), Positives = 48/97 (49%), Gaps = 6/97 (6%) Query: 101 IQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 ++ + +G++P+ + G GLNL ++ V + WW+ +E R + G Sbjct: 834 VRRFQDGEVPVFLLSLKAAGTGLNLTRAEHV-VHYDRWWN-----PAVEAQATDRAYRIG 887 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 R V V+ ++A+ TI++ + + L K + D +L + Sbjct: 888 QTRPVQVHRIVAEGTIEDRIAELLTRKRALADAVLGS 924 >gi|282862053|ref|ZP_06271116.1| SNF2-related protein [Streptomyces sp. ACTE] gi|282563078|gb|EFB68617.1| SNF2-related protein [Streptomyces sp. ACTE] Length = 979 Score = 42.0 bits (97), Expect = 0.056, Method: Composition-based stats. Identities = 22/97 (22%), Positives = 47/97 (48%), Gaps = 6/97 (6%) Query: 101 IQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 + + ++P+ + G GLNL ++ + + WW+ +E R + G Sbjct: 866 VDRFQSAEVPVFLLSLKAAGTGLNLTRAAHV-IHYDRWWN-----PAVEEQATDRAYRIG 919 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + V V+ LIA+ T+++ + + LR+K + D +L + Sbjct: 920 QTQPVQVHRLIAEGTVEDRISELLRSKRALADAVLGS 956 >gi|297739617|emb|CBI29799.3| unnamed protein product [Vitis vinifera] Length = 1557 Score = 42.0 bits (97), Expect = 0.056, Method: Compositional matrix adjust. Identities = 25/80 (31%), Positives = 40/80 (50%), Gaps = 6/80 (7%) Query: 118 SCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 + G G+NL ++ + S W + Q M R + G + V VY LI + T++ Sbjct: 1290 AGGLGINLTAADTVIFYESDWNPTLDLQAM------DRAHRLGQTKDVTVYRLICKETVE 1343 Query: 178 ELVLQRLRTKSTIQDLLLNA 197 E +LQR KST+Q L++ Sbjct: 1344 EKILQRASQKSTVQQLVMTG 1363 >gi|229819960|ref|YP_002881486.1| Non-specific serine/threonine protein kinase [Beutenbergia cavernae DSM 12333] gi|229565873|gb|ACQ79724.1| Non-specific serine/threonine protein kinase [Beutenbergia cavernae DSM 12333] Length = 1118 Score = 42.0 bits (97), Expect = 0.056, Method: Composition-based stats. Identities = 30/102 (29%), Positives = 48/102 (47%), Gaps = 7/102 (6%) Query: 80 DLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWW 139 D A L ++ G T +D I+ + EG P+ + G GLNL + V WW Sbjct: 971 DAAGLAYSYLDGTTRRRD-AVIRGFAEGTDPVFLISLKAGGVGLNLAMA-DYAVLADPWW 1028 Query: 140 DLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVL 181 + +Q ++R + G + V VY L+A +TI+E V+ Sbjct: 1029 NPATEEQAVDR-----AHRIGQTKPVMVYRLVATDTIEEKVM 1065 >gi|327183628|gb|AEA32075.1| Non-specific serine/threonine protein kinase [Lactobacillus amylovorus GRL 1118] Length = 1179 Score = 42.0 bits (97), Expect = 0.057, Method: Compositional matrix adjust. Identities = 25/97 (25%), Positives = 51/97 (52%), Gaps = 7/97 (7%) Query: 101 IQEWNEGKIPLLF-AHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQA 159 IQ +N K P +F + G G+NL ++++ + WW++ Q +R + Sbjct: 1070 IQHFNSLKQPGVFLISLKAGGTGINLT-SADVVIHYDPWWNIAAENQATDR-----AHRI 1123 Query: 160 GFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 G K +V +Y ++ Q+TI+E +++ + K+ + +LN Sbjct: 1124 GQKNSVKIYKMVTQDTIEERIIKLQQKKAELAQAILN 1160 >gi|225441914|ref|XP_002278785.1| PREDICTED: hypothetical protein [Vitis vinifera] Length = 1563 Score = 41.6 bits (96), Expect = 0.057, Method: Compositional matrix adjust. Identities = 25/80 (31%), Positives = 40/80 (50%), Gaps = 6/80 (7%) Query: 118 SCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 + G G+NL ++ + S W + Q M R + G + V VY LI + T++ Sbjct: 1290 AGGLGINLTAADTVIFYESDWNPTLDLQAM------DRAHRLGQTKDVTVYRLICKETVE 1343 Query: 178 ELVLQRLRTKSTIQDLLLNA 197 E +LQR KST+Q L++ Sbjct: 1344 EKILQRASQKSTVQQLVMTG 1363 >gi|240145145|ref|ZP_04743746.1| superfamily II DNA/RNA helicase, SNF2 family [Roseburia intestinalis L1-82] gi|257202823|gb|EEV01108.1| superfamily II DNA/RNA helicase, SNF2 family [Roseburia intestinalis L1-82] gi|291537657|emb|CBL10769.1| Superfamily II DNA/RNA helicases, SNF2 family [Roseburia intestinalis M50/1] gi|291537792|emb|CBL10903.1| Superfamily II DNA/RNA helicases, SNF2 family [Roseburia intestinalis XB6B4] Length = 1099 Score = 41.6 bits (96), Expect = 0.058, Method: Compositional matrix adjust. Identities = 22/81 (27%), Positives = 40/81 (49%), Gaps = 6/81 (7%) Query: 101 IQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 ++ +N +P+ + G GLNL +I++ + WW++ Q R + G Sbjct: 991 VESFNNDDVPVFCISLKAGGTGLNLT-SADIVIHYDPWWNVAVQNQ-----ATDRAHRIG 1044 Query: 161 FKRAVFVYYLIAQNTIDELVL 181 K V VY L+A+ TI+E ++ Sbjct: 1045 QKHVVTVYKLVAEGTIEEKII 1065 >gi|169607597|ref|XP_001797218.1| hypothetical protein SNOG_06857 [Phaeosphaeria nodorum SN15] gi|160701447|gb|EAT85508.2| hypothetical protein SNOG_06857 [Phaeosphaeria nodorum SN15] Length = 1249 Score = 41.6 bits (96), Expect = 0.058, Method: Compositional matrix adjust. Identities = 22/74 (29%), Positives = 40/74 (54%), Gaps = 6/74 (8%) Query: 118 SCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 + G G+NL +++F S W + Q M R + G ++ V VY L++++TI+ Sbjct: 509 AGGLGINLMTADTVVIFDSDWNPQADLQAM------ARAHRIGQQKPVSVYRLVSKDTIE 562 Query: 178 ELVLQRLRTKSTIQ 191 E +L+R R K ++ Sbjct: 563 EEILERARNKRMLE 576 >gi|195497929|ref|XP_002096309.1| GE25130 [Drosophila yakuba] gi|194182410|gb|EDW96021.1| GE25130 [Drosophila yakuba] Length = 282 Score = 41.6 bits (96), Expect = 0.058, Method: Compositional matrix adjust. Identities = 24/69 (34%), Positives = 39/69 (56%), Gaps = 11/69 (15%) Query: 132 LVFFSLWWDLEEHQQMIER---IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKS 188 ++F+ W+ QQ ++R +G T+Q V VY LI + TI+E +LQR R KS Sbjct: 3 VIFYDSDWNPTVDQQAMDRAHRLGQTKQ--------VTVYRLICKGTIEERILQRAREKS 54 Query: 189 TIQDLLLNA 197 IQ ++++ Sbjct: 55 EIQRMVISG 63 >gi|322386968|ref|ZP_08060592.1| Snf2 family protein [Streptococcus cristatus ATCC 51100] gi|321269250|gb|EFX52186.1| Snf2 family protein [Streptococcus cristatus ATCC 51100] Length = 1037 Score = 41.6 bits (96), Expect = 0.059, Method: Compositional matrix adjust. Identities = 26/94 (27%), Positives = 45/94 (47%), Gaps = 6/94 (6%) Query: 104 WNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKR 163 +N+G+ + G GLNL G N ++ LWW+ +E + R + G +R Sbjct: 925 FNQGERSAFLISLKAGGVGLNLT-GANTVILVDLWWN-----PAVEAQAIGRAHRIGQER 978 Query: 164 AVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 V VY +I + TI+E + + TK + +L+ Sbjct: 979 NVKVYRMITRGTIEEKIQELQDTKRNLVSTILDG 1012 >gi|68491912|ref|XP_710254.1| potential DNA-dependent ATPase Ino80p [Candida albicans SC5314] gi|68491929|ref|XP_710247.1| potential DNA-dependent ATPase Ino80p [Candida albicans SC5314] gi|74679547|sp|Q59KI4|INO80_CANAL RecName: Full=Putative DNA helicase INO80 gi|46431413|gb|EAK90982.1| potential DNA-dependent ATPase Ino80p [Candida albicans SC5314] gi|46431421|gb|EAK90989.1| potential DNA-dependent ATPase Ino80p [Candida albicans SC5314] Length = 1387 Score = 41.6 bits (96), Expect = 0.059, Method: Compositional matrix adjust. Identities = 29/101 (28%), Positives = 47/101 (46%), Gaps = 11/101 (10%) Query: 101 IQEWNEGKIPLLFAHPASCGH-GLNLQYGGNILVFFSLWWDLEEHQQM--IERIGVTRQR 157 +Q W +F G GLNL ++ + S W + Q M RIG T+Q Sbjct: 1295 VQAWQTNPEIFIFMLSTRAGGLGLNLTSADTVIFYDSDWNPTIDSQAMDRAHRIGQTKQ- 1353 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNAL 198 V V+ L+ +NTI++ +L+R + K IQ L++ + Sbjct: 1354 -------VKVFRLVTRNTIEQKILERAKEKEEIQKLVVGNM 1387 >gi|299751759|ref|XP_002911684.1| RAD54B protein [Coprinopsis cinerea okayama7#130] gi|298409521|gb|EFI28190.1| RAD54B protein [Coprinopsis cinerea okayama7#130] Length = 1055 Score = 41.6 bits (96), Expect = 0.059, Method: Compositional matrix adjust. Identities = 26/78 (33%), Positives = 37/78 (47%), Gaps = 6/78 (7%) Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 G G+NL G + + S W + Q M R + G KR VF+Y L+ TIDE Sbjct: 798 GVGINLIGGSRLFLIDSDWNPSHDLQAM------ARCHRDGQKRPVFIYRLVTAGTIDEK 851 Query: 180 VLQRLRTKSTIQDLLLNA 197 + QR TK + L+ + Sbjct: 852 IFQRQITKLGLSASLIGS 869 >gi|227543556|ref|ZP_03973605.1| conserved hypothetical protein [Lactobacillus reuteri CF48-3A] gi|227186396|gb|EEI66467.1| conserved hypothetical protein [Lactobacillus reuteri CF48-3A] Length = 73 Score = 41.6 bits (96), Expect = 0.059, Method: Compositional matrix adjust. Identities = 25/68 (36%), Positives = 39/68 (57%), Gaps = 5/68 (7%) Query: 132 LVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQ 191 L+++ L W LE +QQ R+ QRQ V ++++I + TIDE +L L+ K Q Sbjct: 2 LIWYGLTWSLELYQQTNARLWRQGQRQP-----VVIHHIITEGTIDENILAALKRKDKTQ 56 Query: 192 DLLLNALK 199 L+NA+K Sbjct: 57 LALINAVK 64 >gi|58262478|ref|XP_568649.1| DNA dependent ATPase [Cryptococcus neoformans var. neoformans JEC21] gi|57230823|gb|AAW47132.1| DNA dependent ATPase, putative [Cryptococcus neoformans var. neoformans JEC21] Length = 1036 Score = 41.6 bits (96), Expect = 0.059, Method: Compositional matrix adjust. Identities = 24/64 (37%), Positives = 33/64 (51%), Gaps = 6/64 (9%) Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 G GLNL +++F W ++ Q M R + G KR V VY LI Q TI+EL Sbjct: 712 GVGLNLTAANKVVIFDPSWNPADDLQAM------DRAFRIGQKRTVEVYRLIGQGTIEEL 765 Query: 180 VLQR 183 + +R Sbjct: 766 IYER 769 >gi|260494465|ref|ZP_05814595.1| LOW QUALITY PROTEIN: SWF/SNF family helicase [Fusobacterium sp. 3_1_33] gi|260197627|gb|EEW95144.1| LOW QUALITY PROTEIN: SWF/SNF family helicase [Fusobacterium sp. 3_1_33] Length = 683 Score = 41.6 bits (96), Expect = 0.060, Method: Compositional matrix adjust. Identities = 23/95 (24%), Positives = 44/95 (46%), Gaps = 6/95 (6%) Query: 101 IQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 ++++ +PL + G GLNL ++++ WW++ Q R + G Sbjct: 573 VEDFQNEAVPLFLISLKAGGTGLNLT-KASVVIHLDPWWNISAQNQ-----ATDRAHRIG 626 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 + V V+ LI +NTI+E +L K + D+ + Sbjct: 627 QEDTVQVFNLITKNTIEEKILNLQNKKKELSDIFV 661 >gi|227544624|ref|ZP_03974673.1| conserved hypothetical protein [Lactobacillus reuteri CF48-3A] gi|227185390|gb|EEI65461.1| conserved hypothetical protein [Lactobacillus reuteri CF48-3A] Length = 73 Score = 41.6 bits (96), Expect = 0.060, Method: Compositional matrix adjust. Identities = 25/68 (36%), Positives = 39/68 (57%), Gaps = 5/68 (7%) Query: 132 LVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQ 191 L+++ L W LE +QQ R+ QRQ V ++++I + TIDE +L L+ K Q Sbjct: 2 LIWYGLTWSLELYQQTNARLWRQGQRQP-----VVIHHIITEGTIDENILAALKRKDKTQ 56 Query: 192 DLLLNALK 199 L+NA+K Sbjct: 57 LALINAVK 64 >gi|308178567|ref|YP_003917973.1| putative ATP-dependent helicase [Arthrobacter arilaitensis Re117] gi|307746030|emb|CBT77002.1| putative ATP-dependent helicase [Arthrobacter arilaitensis Re117] Length = 1071 Score = 41.6 bits (96), Expect = 0.060, Method: Compositional matrix adjust. Identities = 27/89 (30%), Positives = 44/89 (49%), Gaps = 7/89 (7%) Query: 101 IQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 I ++ + P+ F S G G+NL + + WW+ + Q I+R + G Sbjct: 961 IDGFSAEQFPVFFISLKSGGFGINL-TSADYCILLDPWWNPQAEAQAIDRA-----HRIG 1014 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKST 189 R V+VY L+A++TI+ VL L+ K T Sbjct: 1015 QTRPVYVYRLVAKDTIESKVLA-LQAKKT 1042 >gi|238879929|gb|EEQ43567.1| hypothetical protein CAWG_01805 [Candida albicans WO-1] Length = 1388 Score = 41.6 bits (96), Expect = 0.060, Method: Compositional matrix adjust. Identities = 29/101 (28%), Positives = 47/101 (46%), Gaps = 11/101 (10%) Query: 101 IQEWNEGKIPLLFAHPASCGH-GLNLQYGGNILVFFSLWWDLEEHQQM--IERIGVTRQR 157 +Q W +F G GLNL ++ + S W + Q M RIG T+Q Sbjct: 1296 VQAWQTNPEIFIFMLSTRAGGLGLNLTSADTVIFYDSDWNPTIDSQAMDRAHRIGQTKQ- 1354 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNAL 198 V V+ L+ +NTI++ +L+R + K IQ L++ + Sbjct: 1355 -------VKVFRLVTRNTIEQKILERAKEKEEIQKLVVGNM 1388 >gi|213405783|ref|XP_002173663.1| DNA repair and recombination protein RAD54 [Schizosaccharomyces japonicus yFS275] gi|212001710|gb|EEB07370.1| DNA repair and recombination protein RAD54 [Schizosaccharomyces japonicus yFS275] Length = 853 Score = 41.6 bits (96), Expect = 0.060, Method: Compositional matrix adjust. Identities = 25/77 (32%), Positives = 39/77 (50%), Gaps = 6/77 (7%) Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 G G+NL G N L+ F W+ QQ + R+ + G K+ FVY IA TI+E Sbjct: 699 GCGINL-IGANRLILFDPDWNPAADQQALARVW-----RDGQKKDCFVYRFIATGTIEEK 752 Query: 180 VLQRLRTKSTIQDLLLN 196 + QR K ++ +++ Sbjct: 753 IFQRQSHKQSLSSCVVD 769 >gi|298528668|ref|ZP_07016072.1| SNF2-related protein [Desulfonatronospira thiodismutans ASO3-1] gi|298512320|gb|EFI36222.1| SNF2-related protein [Desulfonatronospira thiodismutans ASO3-1] Length = 1387 Score = 41.6 bits (96), Expect = 0.061, Method: Compositional matrix adjust. Identities = 28/97 (28%), Positives = 45/97 (46%), Gaps = 6/97 (6%) Query: 101 IQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 IQ + EG+ L + G GLNL + ++ WW+ +E R + G Sbjct: 1276 IQAFQEGRGDLFLISLKAGGLGLNLT-AADYVIHLDPWWN-----PAVEDQATDRSHRIG 1329 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + V VY L+A+NTI+E +++ K + D LL Sbjct: 1330 QENPVTVYRLVAENTIEEKIVRLHAEKRDLADSLLEG 1366 >gi|268566403|ref|XP_002639713.1| C. briggsae CBR-RAD-54 protein [Caenorhabditis briggsae] Length = 782 Score = 41.6 bits (96), Expect = 0.061, Method: Compositional matrix adjust. Identities = 25/78 (32%), Positives = 39/78 (50%), Gaps = 6/78 (7%) Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 G GLNL G N LV F W+ Q + R+ + G K+ F+Y L+A +I+E Sbjct: 593 GCGLNL-IGANRLVMFDPDWNPANDDQAMARVW-----RDGQKKTCFIYRLLATGSIEEK 646 Query: 180 VLQRLRTKSTIQDLLLNA 197 + QR K + +++A Sbjct: 647 MFQRQTHKKALSSCVVDA 664 >gi|325120874|emb|CBZ56429.1| putative SNF2 family N-terminal domain-containing protein [Neospora caninum Liverpool] Length = 791 Score = 41.6 bits (96), Expect = 0.061, Method: Compositional matrix adjust. Identities = 26/71 (36%), Positives = 41/71 (57%), Gaps = 7/71 (9%) Query: 118 SCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFK-RAVFVYYLIAQNTI 176 +CGHGLNL G + +F L+W QMI+ R + G + ++ ++YLIA+ T+ Sbjct: 559 ACGHGLNLTAAGTV-IFAELYW---VPGQMIQ--AEDRSHRIGTEFSSIQIHYLIAEGTL 612 Query: 177 DELVLQRLRTK 187 DE V + L+ K Sbjct: 613 DETVFRILQRK 623 >gi|158293531|ref|XP_557901.3| AGAP008748-PA [Anopheles gambiae str. PEST] gi|157016752|gb|EAL40287.3| AGAP008748-PA [Anopheles gambiae str. PEST] Length = 789 Score = 41.6 bits (96), Expect = 0.061, Method: Compositional matrix adjust. Identities = 24/64 (37%), Positives = 34/64 (53%), Gaps = 6/64 (9%) Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 G GLNL G N LV F W+ +Q + R+ + G K+ F+Y L+A TI+E Sbjct: 566 GCGLNL-IGANRLVMFDPDWNPANDEQAMARVW-----RDGQKKPCFIYRLLATGTIEEK 619 Query: 180 VLQR 183 + QR Sbjct: 620 IFQR 623 >gi|309364522|emb|CAP24766.2| hypothetical protein CBG_03965 [Caenorhabditis briggsae AF16] Length = 1109 Score = 41.6 bits (96), Expect = 0.062, Method: Composition-based stats. Identities = 26/78 (33%), Positives = 42/78 (53%), Gaps = 6/78 (7%) Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 G GLNL GGN L+ L W+ QQ +RI + G K+ VF++ L+ NTI++ Sbjct: 1018 GVGLNL-CGGNHLIMVDLHWNPALEQQAFDRI-----YRMGQKKPVFIHRLVTNNTIEQR 1071 Query: 180 VLQRLRTKSTIQDLLLNA 197 V + ++K + +L+ Sbjct: 1072 VAELQKSKLQLASSILDG 1089 >gi|170092399|ref|XP_001877421.1| chromodomain-helicase DNA-binding protein [Laccaria bicolor S238N-H82] gi|164647280|gb|EDR11524.1| chromodomain-helicase DNA-binding protein [Laccaria bicolor S238N-H82] Length = 1291 Score = 41.6 bits (96), Expect = 0.062, Method: Compositional matrix adjust. Identities = 23/88 (26%), Positives = 45/88 (51%), Gaps = 6/88 (6%) Query: 118 SCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 + G G+NL+ +++F S W + Q M R + G K V VY ++++T++ Sbjct: 666 AGGLGINLETADTVIIFDSDWNPQNDLQAM------ARAHRIGQKSHVSVYRFVSKDTME 719 Query: 178 ELVLQRLRTKSTIQDLLLNALKKETIHV 205 E VL+R + K ++ ++N + H+ Sbjct: 720 EDVLERAKKKMVLEYAIINQMDTSQAHL 747 >gi|296411575|ref|XP_002835506.1| hypothetical protein [Tuber melanosporum Mel28] gi|295629290|emb|CAZ79663.1| unnamed protein product [Tuber melanosporum] Length = 812 Score = 41.6 bits (96), Expect = 0.063, Method: Compositional matrix adjust. Identities = 27/85 (31%), Positives = 42/85 (49%), Gaps = 6/85 (7%) Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 G G+NL G N LV F W+ QQ + R+ + G K+ FVY IA TI+E Sbjct: 650 GCGINL-IGANRLVLFDPDWNPAADQQALARVW-----RDGQKKDCFVYRFIATGTIEEK 703 Query: 180 VLQRLRTKSTIQDLLLNALKKETIH 204 + QR K ++ +++ ++ H Sbjct: 704 IFQRQSHKQSLSTSVVDGVEDVERH 728 >gi|241958618|ref|XP_002422028.1| DNA helicase, putative [Candida dubliniensis CD36] gi|223645373|emb|CAX40029.1| DNA helicase, putative [Candida dubliniensis CD36] Length = 1366 Score = 41.6 bits (96), Expect = 0.065, Method: Compositional matrix adjust. Identities = 29/101 (28%), Positives = 47/101 (46%), Gaps = 11/101 (10%) Query: 101 IQEWNEGKIPLLFAHPASCGH-GLNLQYGGNILVFFSLWWDLEEHQQM--IERIGVTRQR 157 +Q W +F G GLNL ++ + S W + Q M RIG T+Q Sbjct: 1274 VQAWQTNPEIFIFMLSTRAGGLGLNLTSADTVIFYDSDWNPTIDSQAMDRAHRIGQTKQ- 1332 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNAL 198 V V+ L+ +NTI++ +L+R + K IQ L++ + Sbjct: 1333 -------VKVFRLVTRNTIEQKILERAKEKEEIQKLVVGNM 1366 >gi|299755187|ref|XP_001828488.2| SNF2-family ATP dependent chromatin remodeling factor snf21 [Coprinopsis cinerea okayama7#130] gi|298411108|gb|EAU93321.2| SNF2-family ATP dependent chromatin remodeling factor snf21 [Coprinopsis cinerea okayama7#130] Length = 1471 Score = 41.6 bits (96), Expect = 0.066, Method: Compositional matrix adjust. Identities = 28/83 (33%), Positives = 41/83 (49%), Gaps = 12/83 (14%) Query: 118 SCGHGLNLQYGGNILVFFSLW---WDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQN 174 + G GLNLQ +++F S W DL + Q RIG T RAV + I + Sbjct: 980 AGGLGLNLQTADTVIIFDSDWNPHADL-QAQDRAHRIGQT--------RAVLILRFITEK 1030 Query: 175 TIDELVLQRLRTKSTIQDLLLNA 197 +++E + QR R K I D ++ A Sbjct: 1031 SVEEAMYQRARYKLDIDDKVIQA 1053 >gi|288917855|ref|ZP_06412216.1| SNF2-related protein [Frankia sp. EUN1f] gi|288350783|gb|EFC84999.1| SNF2-related protein [Frankia sp. EUN1f] Length = 1198 Score = 41.6 bits (96), Expect = 0.066, Method: Composition-based stats. Identities = 27/100 (27%), Positives = 46/100 (46%), Gaps = 7/100 (7%) Query: 82 ARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDL 141 A ++ + G T D+ ++ + EG P+ + G GLNL + WW+ Sbjct: 1072 AGIEHCYLDGSTRDR-AGVLRRFKEGSAPVFLISLKAGGSGLNLTEA-DYCFLLDPWWNP 1129 Query: 142 EEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVL 181 Q ++R + G R V VY L+A++TI+E V+ Sbjct: 1130 ATEAQAVDR-----THRIGQSRNVMVYRLVARDTIEEKVM 1164 >gi|242790191|ref|XP_002481516.1| dsDNA-dependent ATPase Rad54, putative [Talaromyces stipitatus ATCC 10500] gi|218718104|gb|EED17524.1| dsDNA-dependent ATPase Rad54, putative [Talaromyces stipitatus ATCC 10500] Length = 808 Score = 41.6 bits (96), Expect = 0.066, Method: Compositional matrix adjust. Identities = 25/78 (32%), Positives = 40/78 (51%), Gaps = 6/78 (7%) Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 G G+NL G N LV F W+ QQ + R+ + G K+ FVY IA +I+E Sbjct: 642 GCGINL-IGANRLVLFDPDWNPAADQQALARVW-----RDGQKKDCFVYRFIATGSIEEK 695 Query: 180 VLQRLRTKSTIQDLLLNA 197 + QR K ++ ++++ Sbjct: 696 IFQRQSHKQSLSSCVVDS 713 >gi|298710164|emb|CBJ31874.1| Probable chromatin remodelling complex ATPase chain [Ectocarpus siliculosus] Length = 1485 Score = 41.6 bits (96), Expect = 0.069, Method: Compositional matrix adjust. Identities = 23/78 (29%), Positives = 42/78 (53%), Gaps = 6/78 (7%) Query: 118 SCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 + G G+NLQ ++++ S W + Q M R + G KR V VY L+ +NT++ Sbjct: 647 AGGLGINLQTADTVILYDSDWNPQADLQAM------DRAHRIGQKRPVSVYRLVTENTVE 700 Query: 178 ELVLQRLRTKSTIQDLLL 195 E V++R + K + +++ Sbjct: 701 EKVVERAQQKLKLDAMIV 718 >gi|297583813|ref|YP_003699593.1| SNF2-like protein [Bacillus selenitireducens MLS10] gi|297142270|gb|ADH99027.1| SNF2-related protein [Bacillus selenitireducens MLS10] Length = 919 Score = 41.6 bits (96), Expect = 0.070, Method: Compositional matrix adjust. Identities = 26/89 (29%), Positives = 45/89 (50%), Gaps = 6/89 (6%) Query: 109 IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVY 168 IP + + G GLNL +L F WW+ Q +R+ + G K+AV V+ Sbjct: 816 IPFMIISLRAGGFGLNLTEASAVL-HFDRWWNPAVEDQATDRV-----HRIGQKQAVEVH 869 Query: 169 YLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 L+A+ TI+E + ++ K +Q+ L++ Sbjct: 870 TLMAEGTIEERIDDLIQKKQQLQEALIDG 898 >gi|268565237|ref|XP_002639379.1| Hypothetical protein CBG03965 [Caenorhabditis briggsae] Length = 1094 Score = 41.6 bits (96), Expect = 0.070, Method: Composition-based stats. Identities = 26/78 (33%), Positives = 42/78 (53%), Gaps = 6/78 (7%) Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 G GLNL GGN L+ L W+ QQ +RI + G K+ VF++ L+ NTI++ Sbjct: 1003 GVGLNL-CGGNHLIMVDLHWNPALEQQAFDRI-----YRMGQKKPVFIHRLVTNNTIEQR 1056 Query: 180 VLQRLRTKSTIQDLLLNA 197 V + ++K + +L+ Sbjct: 1057 VAELQKSKLQLASSILDG 1074 >gi|116180352|ref|XP_001220025.1| hypothetical protein CHGG_00804 [Chaetomium globosum CBS 148.51] gi|88185101|gb|EAQ92569.1| hypothetical protein CHGG_00804 [Chaetomium globosum CBS 148.51] Length = 1644 Score = 41.6 bits (96), Expect = 0.070, Method: Compositional matrix adjust. Identities = 26/80 (32%), Positives = 41/80 (51%), Gaps = 6/80 (7%) Query: 118 SCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 + G G+NL ++++ S W + Q M R + G KR V VY L+A+ TI+ Sbjct: 858 AGGLGINLMTADTVIIYDSDWNPQADLQAM------ARAHRIGQKRPVNVYRLVAKQTIE 911 Query: 178 ELVLQRLRTKSTIQDLLLNA 197 E V+ R R K ++ L + A Sbjct: 912 EEVVNRARNKLFLEYLTIQA 931 >gi|218885893|ref|YP_002435214.1| DEAD/DEAH box helicase [Desulfovibrio vulgaris str. 'Miyazaki F'] gi|218756847|gb|ACL07746.1| Non-specific serine/threonine protein kinase [Desulfovibrio vulgaris str. 'Miyazaki F'] Length = 1069 Score = 41.6 bits (96), Expect = 0.070, Method: Compositional matrix adjust. Identities = 23/78 (29%), Positives = 38/78 (48%), Gaps = 6/78 (7%) Query: 105 NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA 164 N +IP+ + G GLNL + ++ + WW+ +E R + G R Sbjct: 965 NTPEIPIFLISLKAGGTGLNLT-SADYVIHYDPWWN-----PAVESQATDRTHRIGQTRQ 1018 Query: 165 VFVYYLIAQNTIDELVLQ 182 VF Y LI +NT++E +L+ Sbjct: 1019 VFSYKLICENTVEEKILK 1036 >gi|17540630|ref|NP_502137.1| hypothetical protein F54E12.2 [Caenorhabditis elegans] gi|3873712|emb|CAA97421.1| C. elegans protein F54E12.2, partially confirmed by transcript evidence [Caenorhabditis elegans] gi|3877578|emb|CAB05213.1| C. elegans protein F54E12.2, partially confirmed by transcript evidence [Caenorhabditis elegans] Length = 1091 Score = 41.6 bits (96), Expect = 0.071, Method: Composition-based stats. Identities = 30/86 (34%), Positives = 46/86 (53%), Gaps = 8/86 (9%) Query: 117 ASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTI 176 A+ G GLNL GGN LV L W+ QQ +RI + G K+ VF++ L+ + TI Sbjct: 994 AAGGVGLNLT-GGNHLVMVDLHWNPALEQQAFDRI-----YRMGQKKDVFIHRLVTKGTI 1047 Query: 177 DELVLQRLRTKSTIQDLLL--NALKK 200 ++ V+ + K + +L NA +K Sbjct: 1048 EQRVVMLQKDKVALASSVLDGNATRK 1073 >gi|260905640|ref|ZP_05913962.1| DNA/RNA helicase, superfamily II, SNF2 family protein [Brevibacterium linens BL2] Length = 1012 Score = 41.6 bits (96), Expect = 0.071, Method: Composition-based stats. Identities = 41/156 (26%), Positives = 66/156 (42%), Gaps = 18/156 (11%) Query: 51 VHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARL-----QKAFP----QGRTLDKDPC 99 VH K+ AL +E A IV F S L ++ ++ P G T ++ Sbjct: 833 VHSSKLAALMERLEDVVAEGHRSIVFSQFTSFLDKVAEDLDRRGVPYVVLDGSTRNRGQ- 891 Query: 100 TIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQA 159 + E+ G P+ + G GLNL + + WW+ Q I+R + Sbjct: 892 VVDEFRSGAAPVFLISLKAGGFGLNLTEADYVFLM-DPWWNPATENQAIDR-----AHRI 945 Query: 160 GFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 G + V VY +A+ TI+E VL + K+ + D L+ Sbjct: 946 GQTKNVMVYRYVAEGTIEEKVLALQKKKAELFDSLM 981 >gi|327308794|ref|XP_003239088.1| DNA repair and recombination protein RAD54 [Trichophyton rubrum CBS 118892] gi|326459344|gb|EGD84797.1| DNA repair and recombination protein RAD54 [Trichophyton rubrum CBS 118892] Length = 808 Score = 41.6 bits (96), Expect = 0.071, Method: Compositional matrix adjust. Identities = 25/78 (32%), Positives = 39/78 (50%), Gaps = 6/78 (7%) Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 G G+NL G N LV F W+ QQ + R+ + G + FVY IA TI+E Sbjct: 642 GCGINL-VGANRLVLFDPDWNPAADQQALARVW-----RDGQSKDCFVYRFIATGTIEEK 695 Query: 180 VLQRLRTKSTIQDLLLNA 197 + QR K ++ ++++ Sbjct: 696 IFQRQSHKQSLSSCVIDS 713 >gi|309360381|emb|CAP31417.2| CBR-RAD-54 protein [Caenorhabditis briggsae AF16] Length = 1079 Score = 41.6 bits (96), Expect = 0.071, Method: Compositional matrix adjust. Identities = 25/78 (32%), Positives = 39/78 (50%), Gaps = 6/78 (7%) Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 G GLNL G N LV F W+ Q + R+ + G K+ F+Y L+A +I+E Sbjct: 890 GCGLNL-IGANRLVMFDPDWNPANDDQAMARVW-----RDGQKKTCFIYRLLATGSIEEK 943 Query: 180 VLQRLRTKSTIQDLLLNA 197 + QR K + +++A Sbjct: 944 MFQRQTHKKALSSCVVDA 961 >gi|313233227|emb|CBY24342.1| unnamed protein product [Oikopleura dioica] Length = 1202 Score = 41.6 bits (96), Expect = 0.073, Method: Compositional matrix adjust. Identities = 26/78 (33%), Positives = 41/78 (52%), Gaps = 6/78 (7%) Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 G GLNL G N L+ F W+ Q + R+ + G K+ F+Y L+A TI+E Sbjct: 578 GCGLNL-IGANRLIMFDPDWNPANDDQAMARVW-----RDGQKKRCFIYRLVAAGTIEEK 631 Query: 180 VLQRLRTKSTIQDLLLNA 197 +LQR K + ++++A Sbjct: 632 MLQRQLHKKALSGVVVDA 649 >gi|220914252|ref|YP_002489561.1| non-specific serine/threonine protein kinase [Arthrobacter chlorophenolicus A6] gi|219861130|gb|ACL41472.1| Non-specific serine/threonine protein kinase [Arthrobacter chlorophenolicus A6] Length = 1160 Score = 41.6 bits (96), Expect = 0.073, Method: Composition-based stats. Identities = 25/89 (28%), Positives = 43/89 (48%), Gaps = 7/89 (7%) Query: 101 IQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 + E+ G P+ + G GLNL + + WW+ Q ++R + G Sbjct: 1051 VSEFKNGSAPVFLISLKAGGFGLNLTEADYVFLL-DPWWNPASEAQAVDR-----THRIG 1104 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKST 189 R V VY L+A++TI+E V+ L+T+ + Sbjct: 1105 QARNVMVYRLVAKDTIEEKVMA-LKTRKS 1132 >gi|71909481|ref|YP_287068.1| SNF2-related:helicase, C-terminal:SWIM Zn-finger [Dechloromonas aromatica RCB] gi|71849102|gb|AAZ48598.1| SNF2-related:Helicase, C-terminal:SWIM Zn-finger [Dechloromonas aromatica RCB] Length = 1091 Score = 41.6 bits (96), Expect = 0.073, Method: Compositional matrix adjust. Identities = 24/91 (26%), Positives = 45/91 (49%), Gaps = 7/91 (7%) Query: 91 GRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 G T+D++ I+ + + ++P+ + G GLNL + ++ + WW+ +E Sbjct: 970 GDTVDRE-VPIRRFQDCEVPIFLISLKAGGVGLNLT-AADTVIHYDPWWN-----PAVEN 1022 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVL 181 R + G + VFVY LI +I+E +L Sbjct: 1023 QATDRAHRLGQDKPVFVYKLIVSGSIEEKIL 1053 >gi|310779269|ref|YP_003967602.1| SNF2-related protein [Ilyobacter polytropus DSM 2926] gi|309748592|gb|ADO83254.1| SNF2-related protein [Ilyobacter polytropus DSM 2926] Length = 920 Score = 41.6 bits (96), Expect = 0.074, Method: Composition-based stats. Identities = 30/118 (25%), Positives = 53/118 (44%), Gaps = 6/118 (5%) Query: 80 DLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWW 139 D ++ + G T D+ + N+ K + + G GLNL I ++ WW Sbjct: 790 DKHNIKHLYMTGATKDRQSLVEKFQNDKKCKVFVMTLKTGGVGLNLTAADTIFIY-DPWW 848 Query: 140 DLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + Q ++R + G R VF Y LI + TI+E +L+ KS + + L+++ Sbjct: 849 NKTAEDQAVDR-----SHRMGQDRTVFSYKLITKGTIEEKILKLQEEKSRLFEKLISS 901 >gi|296814920|ref|XP_002847797.1| DNA repair and recombination protein RAD54 [Arthroderma otae CBS 113480] gi|238840822|gb|EEQ30484.1| DNA repair and recombination protein RAD54 [Arthroderma otae CBS 113480] Length = 819 Score = 41.6 bits (96), Expect = 0.074, Method: Compositional matrix adjust. Identities = 25/78 (32%), Positives = 39/78 (50%), Gaps = 6/78 (7%) Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 G G+NL G N LV F W+ QQ + R+ + G + FVY IA TI+E Sbjct: 653 GCGINL-VGANRLVLFDPDWNPAADQQALARVW-----RDGQSKDCFVYRFIATGTIEEK 706 Query: 180 VLQRLRTKSTIQDLLLNA 197 + QR K ++ ++++ Sbjct: 707 IFQRQSHKQSLSSCVVDS 724 >gi|229817614|ref|ZP_04447896.1| hypothetical protein BIFANG_02882 [Bifidobacterium angulatum DSM 20098] gi|229785403|gb|EEP21517.1| hypothetical protein BIFANG_02882 [Bifidobacterium angulatum DSM 20098] Length = 1229 Score = 41.6 bits (96), Expect = 0.074, Method: Composition-based stats. Identities = 23/90 (25%), Positives = 45/90 (50%), Gaps = 6/90 (6%) Query: 101 IQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 + ++N +P+ + GLNL G ++++ WW+ Q +R + G Sbjct: 1120 VNQFNMDDVPVFLISLKAGNTGLNLT-GASVVIHADPWWNAAAQSQATDR-----AHRIG 1173 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 + V VY ++AQ+TI+E +L+ + KS + Sbjct: 1174 QTQDVNVYQIVAQHTIEERILRLQKEKSAL 1203 >gi|294462184|gb|ADE76644.1| unknown [Picea sitchensis] Length = 407 Score = 41.2 bits (95), Expect = 0.075, Method: Compositional matrix adjust. Identities = 28/84 (33%), Positives = 42/84 (50%), Gaps = 8/84 (9%) Query: 111 LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYL 170 LL + CG LNL GGN LV F W+ +Q R+ + G K+ V++Y Sbjct: 73 LLSSKAGGCG--LNL-IGGNRLVLFDPDWNPANDKQAAARVW-----RDGQKKRVYIYRF 124 Query: 171 IAQNTIDELVLQRLRTKSTIQDLL 194 + TI+E V QR +K +Q ++ Sbjct: 125 LTTGTIEEKVYQRQMSKEGLQKVV 148 >gi|168066598|ref|XP_001785222.1| SWR1 complex protein, SNF2 family DNA-dependent ATPase [Physcomitrella patens subsp. patens] gi|162663184|gb|EDQ49963.1| SWR1 complex protein, SNF2 family DNA-dependent ATPase [Physcomitrella patens subsp. patens] Length = 1727 Score = 41.2 bits (95), Expect = 0.075, Method: Compositional matrix adjust. Identities = 30/94 (31%), Positives = 49/94 (52%), Gaps = 14/94 (14%) Query: 108 KIPLLFAHPASCGHGLNLQYGGNILVFFSLWW----DLEEHQQMIERIGVTRQRQAGFKR 163 KI L S G G+NL G + ++F+ W DL+ Q RIG TR+ Sbjct: 1094 KIFLFILSTRSGGVGINL-VGADTVIFYDSDWNPAMDLQ-AQDRCHRIGQTRE------- 1144 Query: 164 AVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 V +Y LI+++TI+E +L++ K + DL++ + Sbjct: 1145 -VHIYRLISESTIEENILKKANQKRILDDLVIQS 1177 >gi|226360762|ref|YP_002778540.1| helicase [Rhodococcus opacus B4] gi|226239247|dbj|BAH49595.1| putative helicase [Rhodococcus opacus B4] Length = 1073 Score = 41.2 bits (95), Expect = 0.076, Method: Composition-based stats. Identities = 31/118 (26%), Positives = 54/118 (45%), Gaps = 7/118 (5%) Query: 80 DLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWW 139 D A + A+ G T + ++++ EG P+ + G GLNL + WW Sbjct: 945 DDAGIAHAYLDGATRRRGD-VLRDFKEGDAPVFLISLKAGGFGLNLTEADYCFIL-DPWW 1002 Query: 140 DLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + Q ++R + G R V VY LIA++TI++ V+ KS + +++A Sbjct: 1003 NPATEAQAVDR-----AHRIGQTRNVMVYRLIAKDTIEDKVMALKAKKSALFSSVMDA 1055 >gi|170041242|ref|XP_001848380.1| DNA repair and recombination protein RAD54 [Culex quinquefasciatus] gi|167864826|gb|EDS28209.1| DNA repair and recombination protein RAD54 [Culex quinquefasciatus] Length = 787 Score = 41.2 bits (95), Expect = 0.076, Method: Compositional matrix adjust. Identities = 24/77 (31%), Positives = 40/77 (51%), Gaps = 6/77 (7%) Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 G GLNL G N LV F W+ +Q + R+ + G K+ F+Y L+A +I+E Sbjct: 565 GCGLNL-IGANRLVMFDPDWNPANDEQAMARVW-----RDGQKKPCFIYRLLATGSIEEK 618 Query: 180 VLQRLRTKSTIQDLLLN 196 + QR K + + +++ Sbjct: 619 IFQRQTHKKALSNTVVD 635 >gi|116672340|ref|YP_833273.1| SNF2-related protein [Arthrobacter sp. FB24] gi|116612449|gb|ABK05173.1| SNF2-related protein [Arthrobacter sp. FB24] Length = 1154 Score = 41.2 bits (95), Expect = 0.076, Method: Composition-based stats. Identities = 25/90 (27%), Positives = 41/90 (45%), Gaps = 6/90 (6%) Query: 101 IQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 + E+ G P+ + G GLNL + + WW+ Q ++R + G Sbjct: 1045 VNEFKNGSAPVFLISLKAGGFGLNLTEADYVFLL-DPWWNPASEAQAVDR-----THRIG 1098 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 R V VY L+A++TI+E V+ KS + Sbjct: 1099 QARNVMVYRLVAKDTIEEKVMALKAKKSQL 1128 >gi|300786586|ref|YP_003766877.1| SNF2/RAD54 family helicase [Amycolatopsis mediterranei U32] gi|299796100|gb|ADJ46475.1| SNF2/RAD54 family helicase [Amycolatopsis mediterranei U32] Length = 838 Score = 41.2 bits (95), Expect = 0.076, Method: Composition-based stats. Identities = 24/95 (25%), Positives = 44/95 (46%), Gaps = 6/95 (6%) Query: 101 IQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 + + G +P+ + G GLNL ++ V F WW+ +E R + G Sbjct: 725 VARFQAGAVPVFLLSLKAAGTGLNLTRADHV-VHFDRWWN-----PAVEDQATDRAYRIG 778 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 R V V+ L+A+ T+++ + LR K + + +L Sbjct: 779 QTRPVQVHRLVAEGTVEDRIAAMLREKRALAEAVL 813 >gi|134301077|ref|YP_001114573.1| SNF2 helicase associated domain-containing protein [Desulfotomaculum reducens MI-1] gi|134053777|gb|ABO51748.1| SNF2 helicase associated domain protein [Desulfotomaculum reducens MI-1] Length = 1084 Score = 41.2 bits (95), Expect = 0.076, Method: Compositional matrix adjust. Identities = 41/138 (29%), Positives = 61/138 (44%), Gaps = 18/138 (13%) Query: 55 KIKALEVIIEKA--NAAPIIVAYHFNS-------DLARLQKAF--PQGRTLDKDPCTI-Q 102 K++ L IIE N ++V F S +L RL K++ G+T KD + Q Sbjct: 917 KLEQLMEIIENTLENKRRLLVFSQFASMLGIICEELDRLNKSYFYLDGQTPAKDRVEMTQ 976 Query: 103 EWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFK 162 +N G+ L + G GLNL + + + LWW+ IE R + G K Sbjct: 977 RFNNGEKDLFLISLKAGGTGLNLTGADTV-ILYDLWWN-----PAIEEQAAGRAHRMGQK 1030 Query: 163 RAVFVYYLIAQNTIDELV 180 V V LI + TI+E + Sbjct: 1031 NCVQVIKLITKGTIEEKI 1048 >gi|14548140|gb|AAK66797.1|U40238_20 SWI/SNF family helicase [uncultured crenarchaeote 4B7] Length = 570 Score = 41.2 bits (95), Expect = 0.077, Method: Compositional matrix adjust. Identities = 29/96 (30%), Positives = 47/96 (48%), Gaps = 6/96 (6%) Query: 101 IQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 I + +G+ L+ A + G+NL ++F L W H+Q +R+ + G Sbjct: 454 IDRFQKGQTKLMIAGLRAGNVGINLT-TAKYVIFAELDWSPAIHRQAEDRL-----HRIG 507 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 K VF YYL+ + T+DE V + L KS D +L+ Sbjct: 508 QKNTVFAYYLVGKGTLDEHVAEILVDKSYEIDTILD 543 >gi|320011393|gb|ADW06243.1| SNF2-related protein [Streptomyces flavogriseus ATCC 33331] Length = 964 Score = 41.2 bits (95), Expect = 0.078, Method: Composition-based stats. Identities = 22/97 (22%), Positives = 48/97 (49%), Gaps = 6/97 (6%) Query: 101 IQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 + + G++P+ + G GLNL ++ + + WW+ +E R + G Sbjct: 851 VDGFQSGEVPVFLLSLKAAGTGLNLTRAAHV-IHYDRWWN-----PAVEEQATDRAYRIG 904 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + V V+ LIA+ T+++ + + L++K + D +L + Sbjct: 905 QTQPVQVHRLIAEGTVEDRISELLQSKRALADAVLGS 941 >gi|295835764|ref|ZP_06822697.1| SNF2/helicase domain-containing protein [Streptomyces sp. SPB74] gi|295825680|gb|EFG64393.1| SNF2/helicase domain-containing protein [Streptomyces sp. SPB74] Length = 788 Score = 41.2 bits (95), Expect = 0.078, Method: Composition-based stats. Identities = 25/105 (23%), Positives = 48/105 (45%), Gaps = 6/105 (5%) Query: 91 GRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 G ++ + + G +P+L + G GLNL G++ V + WW+ +E Sbjct: 664 GTPVEARDALVDRFQSGALPVLVLSLKAAGTGLNLTRAGHV-VHYDRWWN-----PAVED 717 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 R + G R V V+ L+A+ T+++ + + K + D +L Sbjct: 718 QATDRAHRIGQTRHVQVHRLLAEGTVEDRIADLVAGKQALADAVL 762 >gi|190345413|gb|EDK37294.2| hypothetical protein PGUG_01392 [Meyerozyma guilliermondii ATCC 6260] Length = 888 Score = 41.2 bits (95), Expect = 0.078, Method: Composition-based stats. Identities = 27/77 (35%), Positives = 38/77 (49%), Gaps = 6/77 (7%) Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 G GLNL G + L+ F W+ Q + RI + G KR VF+Y L+ IDE Sbjct: 679 GVGLNL-VGASRLILFDNDWNPSVDLQAMARI-----HRDGQKRPVFIYRLLTTGCIDEK 732 Query: 180 VLQRLRTKSTIQDLLLN 196 + QR K+ + D L+ Sbjct: 733 IFQRQLMKNNLSDKFLD 749 >gi|94309439|ref|YP_582649.1| SNF2-like protein [Cupriavidus metallidurans CH34] gi|93353291|gb|ABF07380.1| Superfamily II DNA/RNA helicase, SNF2 family [Cupriavidus metallidurans CH34] Length = 1025 Score = 41.2 bits (95), Expect = 0.078, Method: Composition-based stats. Identities = 27/84 (32%), Positives = 41/84 (48%), Gaps = 6/84 (7%) Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 G GLNL + +V WW+ Q + R + G +R V VY LIA TI+E Sbjct: 930 GFGLNLT-AADYIVIADPWWNPAAEDQ-----AMGRAHRIGQQRPVTVYRLIAAGTIEER 983 Query: 180 VLQRLRTKSTIQDLLLNALKKETI 203 ++ + K + D +L+A+ E I Sbjct: 984 IVDLHQGKRALADGVLDAMDGEAI 1007 >gi|291449545|ref|ZP_06588935.1| SNF2/RAD54 family helicase [Streptomyces roseosporus NRRL 15998] gi|291352492|gb|EFE79396.1| SNF2/RAD54 family helicase [Streptomyces roseosporus NRRL 15998] Length = 946 Score = 41.2 bits (95), Expect = 0.080, Method: Composition-based stats. Identities = 26/97 (26%), Positives = 45/97 (46%), Gaps = 6/97 (6%) Query: 101 IQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 + + G+ P+ + G GLNL G++ V F WW+ +E R + G Sbjct: 832 VARFQSGEAPVFLLSLKAAGTGLNLTRAGHV-VHFDRWWN-----PAVEAQATDRAYRIG 885 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + V V+ LIA+ TI++ + L K + D +L + Sbjct: 886 QTQPVQVHRLIAEGTIEDRIAGMLARKQGLADAVLGS 922 >gi|239946094|ref|ZP_04698031.1| SNF2/RAD54 family helicase [Streptomyces roseosporus NRRL 15998] gi|239992567|ref|ZP_04713231.1| SNF2/RAD54 family helicase [Streptomyces roseosporus NRRL 11379] Length = 1005 Score = 41.2 bits (95), Expect = 0.080, Method: Composition-based stats. Identities = 26/97 (26%), Positives = 45/97 (46%), Gaps = 6/97 (6%) Query: 101 IQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 + + G+ P+ + G GLNL G++ V F WW+ +E R + G Sbjct: 891 VARFQSGEAPVFLLSLKAAGTGLNLTRAGHV-VHFDRWWN-----PAVEAQATDRAYRIG 944 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + V V+ LIA+ TI++ + L K + D +L + Sbjct: 945 QTQPVQVHRLIAEGTIEDRIAGMLARKQGLADAVLGS 981 >gi|152975221|ref|YP_001374738.1| non-specific serine/threonine protein kinase [Bacillus cereus subsp. cytotoxis NVH 391-98] gi|152023973|gb|ABS21743.1| Non-specific serine/threonine protein kinase [Bacillus cytotoxicus NVH 391-98] Length = 1066 Score = 41.2 bits (95), Expect = 0.080, Method: Compositional matrix adjust. Identities = 25/75 (33%), Positives = 37/75 (49%), Gaps = 6/75 (8%) Query: 104 WNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKR 163 +NEG+ L + G GLNL G + ++ + LWW+ QQ R + G K Sbjct: 960 FNEGEGDLFLISLKAGGTGLNLT-GADTVILYDLWWNPSVEQQ-----AADRAYRMGQKN 1013 Query: 164 AVFVYYLIAQNTIDE 178 V V L+A+ TI+E Sbjct: 1014 TVQVIKLVARGTIEE 1028 >gi|299751086|ref|XP_001830045.2| transcription regulator [Coprinopsis cinerea okayama7#130] gi|298409213|gb|EAU91710.2| transcription regulator [Coprinopsis cinerea okayama7#130] Length = 1441 Score = 41.2 bits (95), Expect = 0.081, Method: Compositional matrix adjust. Identities = 23/88 (26%), Positives = 45/88 (51%), Gaps = 6/88 (6%) Query: 118 SCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 + G G+NL+ +++F S W + Q M R + G K V VY ++++T++ Sbjct: 768 AGGLGINLETADTVIIFDSDWNPQNDLQAM------ARAHRIGQKSHVSVYRFVSKDTME 821 Query: 178 ELVLQRLRTKSTIQDLLLNALKKETIHV 205 E VL+R + K ++ ++N + H+ Sbjct: 822 EDVLERAKRKMVLEYAIINQMDTTQAHL 849 >gi|281203153|gb|EFA77354.1| chromo domain-containing protein [Polysphondylium pallidum PN500] Length = 1842 Score = 41.2 bits (95), Expect = 0.081, Method: Compositional matrix adjust. Identities = 22/86 (25%), Positives = 44/86 (51%), Gaps = 6/86 (6%) Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 G G+NL +++F S W + Q R + G K V +Y L++++TI+E Sbjct: 1099 GLGINLSTADTVIIFDSDWNPQNDLQ------AEARAHRIGQKNTVNIYRLVSKSTIEEE 1152 Query: 180 VLQRLRTKSTIQDLLLNALKKETIHV 205 +L+R + K + L++ +++K + Sbjct: 1153 ILERAKQKMVLDHLVIQSMEKSSTKT 1178 >gi|30687235|ref|NP_197432.2| homeotic gene regulator, putative [Arabidopsis thaliana] gi|332005300|gb|AED92683.1| Homeotic gene regulator [Arabidopsis thaliana] Length = 1064 Score = 41.2 bits (95), Expect = 0.081, Method: Compositional matrix adjust. Identities = 29/105 (27%), Positives = 54/105 (51%), Gaps = 8/105 (7%) Query: 95 DKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIG 152 D+ ++++NE P + + G GLNLQ I++F S W + QM ++ Sbjct: 748 DQRGILLKQFNEPDSPYFMFLLSTRAGGLGLNLQTADTIIIFDSDW-----NPQMDQQ-A 801 Query: 153 VTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 R + G K+ V V+ L++ +I+E++L+R + K I ++ A Sbjct: 802 EDRAHRIGQKKEVRVFVLVSIGSIEEVILERAKQKMGIDAKVIQA 846 >gi|323449406|gb|EGB05294.1| hypothetical protein AURANDRAFT_17107 [Aureococcus anophagefferens] Length = 92 Score = 41.2 bits (95), Expect = 0.082, Method: Compositional matrix adjust. Identities = 23/73 (31%), Positives = 37/73 (50%), Gaps = 6/73 (8%) Query: 108 KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFV 167 + +L A A+ G GLN+ N+L F WW+ H Q ++ R + G R V V Sbjct: 9 SVNVLLATVATAGVGLNIVEANNVL-FLDRWWNPTVHDQAMD-----RTHRLGQTRPVDV 62 Query: 168 YYLIAQNTIDELV 180 +L +T+DE++ Sbjct: 63 RFLDGVDTVDEVM 75 >gi|300855333|ref|YP_003780317.1| putative SNF2 family helicase [Clostridium ljungdahlii DSM 13528] gi|300435448|gb|ADK15215.1| predicted SNF2 family helicase [Clostridium ljungdahlii DSM 13528] Length = 1080 Score = 41.2 bits (95), Expect = 0.082, Method: Composition-based stats. Identities = 29/99 (29%), Positives = 50/99 (50%), Gaps = 7/99 (7%) Query: 101 IQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 ++++N+GK + + G GLNL ++++ F WW+ +E R + G Sbjct: 967 VKKFNKGKNSVFLISLKAGGTGLNLT-SADVVIHFDPWWN-----TAVEEQAADRTHRIG 1020 Query: 161 FKRAVFVYYLIAQNTIDE-LVLQRLRTKSTIQDLLLNAL 198 K V V +IA+ TI+E +VL + K I+ L+ N L Sbjct: 1021 QKNVVEVIKIIAKGTIEEKIVLLQNEKKKLIEKLMENKL 1059 >gi|146419519|ref|XP_001485721.1| hypothetical protein PGUG_01392 [Meyerozyma guilliermondii ATCC 6260] Length = 888 Score = 41.2 bits (95), Expect = 0.082, Method: Composition-based stats. Identities = 27/77 (35%), Positives = 38/77 (49%), Gaps = 6/77 (7%) Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 G GLNL G + L+ F W+ Q + RI + G KR VF+Y L+ IDE Sbjct: 679 GVGLNL-VGASRLILFDNDWNPSVDLQAMARI-----HRDGQKRPVFIYRLLTTGCIDEK 732 Query: 180 VLQRLRTKSTIQDLLLN 196 + QR K+ + D L+ Sbjct: 733 IFQRQLMKNNLSDKFLD 749 >gi|294949971|ref|XP_002786396.1| DNA repair protein Rad54, putative [Perkinsus marinus ATCC 50983] gi|239900688|gb|EER18192.1| DNA repair protein Rad54, putative [Perkinsus marinus ATCC 50983] Length = 756 Score = 41.2 bits (95), Expect = 0.082, Method: Compositional matrix adjust. Identities = 25/76 (32%), Positives = 41/76 (53%), Gaps = 6/76 (7%) Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 G GLNL GGN LV F W+ +Q + RI + G + ++Y L++ TI+E Sbjct: 583 GCGLNL-IGGNRLVMFDPDWNPANDRQAMARIW-----RDGQTKVCWIYRLLSTGTIEEK 636 Query: 180 VLQRLRTKSTIQDLLL 195 + QR K ++ +L++ Sbjct: 637 IYQRQMKKDSLSELVV 652 >gi|58266666|ref|XP_570489.1| hypothetical protein [Cryptococcus neoformans var. neoformans JEC21] gi|134110324|ref|XP_775989.1| hypothetical protein CNBD0390 [Cryptococcus neoformans var. neoformans B-3501A] gi|74685408|sp|Q5KHM0|INO80_CRYNE RecName: Full=Putative DNA helicase INO80 gi|50258657|gb|EAL21342.1| hypothetical protein CNBD0390 [Cryptococcus neoformans var. neoformans B-3501A] gi|57226722|gb|AAW43182.1| conserved hypothetical protein [Cryptococcus neoformans var. neoformans JEC21] Length = 1765 Score = 41.2 bits (95), Expect = 0.083, Method: Composition-based stats. Identities = 24/76 (31%), Positives = 41/76 (53%), Gaps = 6/76 (7%) Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 G G+NL + ++F+ W+ Q ++R + G + V VY L+A+ TI+E Sbjct: 1532 GLGINLT-AADTVIFYDHDWNPSSDAQAMDR-----AHRVGQTKQVTVYRLVARGTIEER 1585 Query: 180 VLQRLRTKSTIQDLLL 195 +LQ R K IQD+++ Sbjct: 1586 ILQMARGKKDIQDVVV 1601 >gi|325956842|ref|YP_004292254.1| Non-specific serine/threonine protein kinase [Lactobacillus acidophilus 30SC] gi|325333407|gb|ADZ07315.1| Non-specific serine/threonine protein kinase [Lactobacillus acidophilus 30SC] Length = 1179 Score = 41.2 bits (95), Expect = 0.084, Method: Compositional matrix adjust. Identities = 24/97 (24%), Positives = 51/97 (52%), Gaps = 7/97 (7%) Query: 101 IQEWNEGKIPLLF-AHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQA 159 IQ +N K P +F + G G+NL ++++ + WW++ Q +R + Sbjct: 1070 IQHFNSLKQPGVFLISLKAGGTGINLT-SADVVIHYDPWWNIAAENQATDR-----AHRI 1123 Query: 160 GFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 G K +V +Y ++ Q+T++E +++ + K+ + +LN Sbjct: 1124 GQKNSVKIYKMVTQDTVEERIIKLQQKKAELAQAILN 1160 >gi|315038431|ref|YP_004031999.1| Non-specific serine/threonine protein kinase [Lactobacillus amylovorus GRL 1112] gi|312276564|gb|ADQ59204.1| Non-specific serine/threonine protein kinase [Lactobacillus amylovorus GRL 1112] Length = 1180 Score = 41.2 bits (95), Expect = 0.084, Method: Compositional matrix adjust. Identities = 24/97 (24%), Positives = 51/97 (52%), Gaps = 7/97 (7%) Query: 101 IQEWNEGKIPLLF-AHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQA 159 IQ +N K P +F + G G+NL ++++ + WW++ Q +R + Sbjct: 1071 IQHFNSLKQPGVFLISLKAGGTGINLT-SADVVIHYDPWWNIAAENQATDR-----AHRI 1124 Query: 160 GFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 G K +V +Y ++ Q+T++E +++ + K+ + +LN Sbjct: 1125 GQKNSVKIYKMVTQDTVEERIIKLQQKKAELAQAILN 1161 >gi|50311185|ref|XP_455616.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140] gi|49644752|emb|CAG98324.1| KLLA0F11814p [Kluyveromyces lactis] Length = 931 Score = 41.2 bits (95), Expect = 0.084, Method: Compositional matrix adjust. Identities = 27/79 (34%), Positives = 37/79 (46%), Gaps = 6/79 (7%) Query: 105 NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA 164 N+ I + S G GLNL G + LV F W+ Q + RI + G +R Sbjct: 700 NDPSIFVFLLSAKSGGVGLNL-IGASRLVLFDNDWNPSIDLQAMSRI-----HRDGQRRP 753 Query: 165 VFVYYLIAQNTIDELVLQR 183 F+Y L+ IDE +LQR Sbjct: 754 CFIYRLVTTGCIDEKILQR 772 >gi|156843751|ref|XP_001644941.1| hypothetical protein Kpol_1025p2 [Vanderwaltozyma polyspora DSM 70294] gi|156115595|gb|EDO17083.1| hypothetical protein Kpol_1025p2 [Vanderwaltozyma polyspora DSM 70294] Length = 1507 Score = 41.2 bits (95), Expect = 0.084, Method: Compositional matrix adjust. Identities = 23/74 (31%), Positives = 39/74 (52%), Gaps = 6/74 (8%) Query: 118 SCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 + G G+NL +++F S W + Q M R + G K V VY L++++T++ Sbjct: 800 AGGLGINLMTADTVIIFDSDWNPQADLQAM------ARAHRIGQKNHVMVYRLVSKDTVE 853 Query: 178 ELVLQRLRTKSTIQ 191 E VL+R R K ++ Sbjct: 854 EEVLERARKKMILE 867 >gi|70729334|ref|YP_259071.1| helicase/SNF2 domain-containing protein [Pseudomonas fluorescens Pf-5] gi|68343633|gb|AAY91239.1| helicase/SNF2 family domain protein [Pseudomonas fluorescens Pf-5] Length = 875 Score = 41.2 bits (95), Expect = 0.084, Method: Compositional matrix adjust. Identities = 29/113 (25%), Positives = 55/113 (48%), Gaps = 7/113 (6%) Query: 87 AFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 A G+T D+ ++++ GK+ + + G GLNL + ++ + WW+ Q Sbjct: 745 ALLTGQTRDRR-TPVRDFQSGKLQIFLISLKAGGVGLNLTEA-DTVIHYDPWWNPATESQ 802 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 +R + G ++ VFVY LIA+ T++E + + KS + +L+ K Sbjct: 803 ATDRA-----YRIGQEKPVFVYKLIARGTVEEKIQHLQQEKSDLAAGVLDGRK 850 >gi|50293735|ref|XP_449279.1| hypothetical protein [Candida glabrata CBS 138] gi|49528592|emb|CAG62253.1| unnamed protein product [Candida glabrata] Length = 1476 Score = 41.2 bits (95), Expect = 0.084, Method: Compositional matrix adjust. Identities = 23/74 (31%), Positives = 39/74 (52%), Gaps = 6/74 (8%) Query: 118 SCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 + G G+NL +++F S W + Q M R + G K V VY L++++T++ Sbjct: 788 AGGLGINLMTADTVIIFDSDWNPQADLQAM------ARAHRIGQKNHVMVYRLVSKDTVE 841 Query: 178 ELVLQRLRTKSTIQ 191 E VL+R R K ++ Sbjct: 842 EEVLERARKKMILE 855 >gi|170739234|ref|YP_001767889.1| non-specific serine/threonine protein kinase [Methylobacterium sp. 4-46] gi|168193508|gb|ACA15455.1| Non-specific serine/threonine protein kinase [Methylobacterium sp. 4-46] Length = 1120 Score = 41.2 bits (95), Expect = 0.085, Method: Composition-based stats. Identities = 37/156 (23%), Positives = 65/156 (41%), Gaps = 24/156 (15%) Query: 55 KIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPC------------T 100 K+ L+ ++E A ++V F S L ++ TL K PC Sbjct: 955 KLDRLDELLESLIAEGRRVLVFSQFTSMLDLIKPRL----TLAKTPCLELTGRSRDRAEV 1010 Query: 101 IQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 ++ + G+ P+ + G GLNL + ++ + WW+ Q I+R + G Sbjct: 1011 VRRFEAGEAPVFLISLKAGGTGLNL-VAADTVILYDPWWNPAVEAQAIDR-----AHRIG 1064 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + VFV+ L+A TI+E + K + D L + Sbjct: 1065 QDKPVFVHKLVASRTIEEKMGVLKERKGALADSLFD 1100 >gi|118576973|ref|YP_876716.1| superfamily II DNA/RNA helicase, SNF2 family [Cenarchaeum symbiosum A] gi|118195494|gb|ABK78412.1| superfamily II DNA/RNA helicase, SNF2 family [Cenarchaeum symbiosum A] Length = 574 Score = 41.2 bits (95), Expect = 0.085, Method: Compositional matrix adjust. Identities = 30/96 (31%), Positives = 45/96 (46%), Gaps = 6/96 (6%) Query: 101 IQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 I + EG+ L+ A + G+NL ++F L W H+Q +R+ + G Sbjct: 454 IDSFQEGRSKLMIAGLRAGNVGINLSRA-RYVIFAELDWSPAIHRQAEDRL-----HRIG 507 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 K VF YYLI T+DE V L KS D +++ Sbjct: 508 QKNTVFAYYLIGNGTLDEHVANILVDKSYEIDSIMD 543 >gi|302504353|ref|XP_003014135.1| hypothetical protein ARB_07440 [Arthroderma benhamiae CBS 112371] gi|291177703|gb|EFE33495.1| hypothetical protein ARB_07440 [Arthroderma benhamiae CBS 112371] Length = 790 Score = 41.2 bits (95), Expect = 0.086, Method: Compositional matrix adjust. Identities = 25/78 (32%), Positives = 39/78 (50%), Gaps = 6/78 (7%) Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 G G+NL G N LV F W+ QQ + R+ + G + FVY IA TI+E Sbjct: 624 GCGINL-VGANRLVLFDPDWNPAADQQALARVW-----RDGQSKDCFVYRFIATGTIEEK 677 Query: 180 VLQRLRTKSTIQDLLLNA 197 + QR K ++ ++++ Sbjct: 678 IFQRQSHKQSLSSCVVDS 695 >gi|198417079|ref|XP_002130103.1| PREDICTED: similar to RAD54-like [Ciona intestinalis] Length = 775 Score = 41.2 bits (95), Expect = 0.086, Method: Compositional matrix adjust. Identities = 28/106 (26%), Positives = 49/106 (46%), Gaps = 8/106 (7%) Query: 93 TLDKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 T+ K ++++N P + + G GLNL G N LV F W+ +Q + R Sbjct: 576 TIKKRAKVVEKFNNPSSPEFVFMLSSKAGGCGLNL-IGANRLVMFDPDWNPANDEQAMAR 634 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + + G K+ F+Y L+ TI+E + QR K + +++ Sbjct: 635 VW-----RDGQKKPCFIYRLLGTGTIEEKIFQRQAHKKALSSCVVD 675 >gi|325964972|ref|YP_004242878.1| DNA/RNA helicase, superfamily II, SNF2 family [Arthrobacter phenanthrenivorans Sphe3] gi|323471059|gb|ADX74744.1| DNA/RNA helicase, superfamily II, SNF2 family [Arthrobacter phenanthrenivorans Sphe3] Length = 1144 Score = 41.2 bits (95), Expect = 0.086, Method: Composition-based stats. Identities = 25/90 (27%), Positives = 41/90 (45%), Gaps = 6/90 (6%) Query: 101 IQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 + E+ G P+ + G GLNL + + WW+ Q ++R + G Sbjct: 1035 VNEFKNGSAPVFLISLKAGGFGLNLTEADYVFLL-DPWWNPASEAQAVDR-----THRIG 1088 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 R V VY L+A++TI+E V+ KS + Sbjct: 1089 QARNVMVYRLVAKDTIEEKVMALKARKSQL 1118 >gi|198428806|ref|XP_002129178.1| PREDICTED: similar to helicase, lymphoid-specific [Ciona intestinalis] Length = 936 Score = 41.2 bits (95), Expect = 0.086, Method: Compositional matrix adjust. Identities = 29/102 (28%), Positives = 51/102 (50%), Gaps = 17/102 (16%) Query: 101 IQEWNEGKIPLLFAHPASC---GHGLNLQYGGNILVFFSLWW---DLEEHQQMIERIGVT 154 I E+N + P LF S G G+NL ++++ S W DL+ Q RIG T Sbjct: 773 IDEYN--RDPDLFIFLLSTRAGGLGINLTSADTVVIYDSDWNPQNDLQ-AQDRCHRIGQT 829 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 R +V +Y ++ NT+D+ +++R K ++ +++N Sbjct: 830 R--------SVLIYRFVSSNTVDQFMVERAEAKRVLERMIIN 863 >gi|145614554|ref|XP_362144.2| hypothetical protein MGG_04589 [Magnaporthe oryzae 70-15] gi|145021462|gb|EDK05591.1| hypothetical protein MGG_04589 [Magnaporthe oryzae 70-15] Length = 1654 Score = 41.2 bits (95), Expect = 0.086, Method: Compositional matrix adjust. Identities = 25/80 (31%), Positives = 41/80 (51%), Gaps = 6/80 (7%) Query: 118 SCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 + G G+NL ++++ S W + Q M R + G KR V VY L+A+ T++ Sbjct: 859 AGGLGINLMTADTVIIYDSDWNPQADLQAM------ARAHRIGQKRPVNVYRLVAKQTVE 912 Query: 178 ELVLQRLRTKSTIQDLLLNA 197 E V+ R R K ++ L + A Sbjct: 913 EEVVNRARNKLFLEYLTIQA 932 >gi|77460089|ref|YP_349596.1| SNF2-like [Pseudomonas fluorescens Pf0-1] gi|77384092|gb|ABA75605.1| putative helicase [Pseudomonas fluorescens Pf0-1] Length = 896 Score = 41.2 bits (95), Expect = 0.086, Method: Compositional matrix adjust. Identities = 30/113 (26%), Positives = 53/113 (46%), Gaps = 7/113 (6%) Query: 87 AFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 A G+T D+ ++E+ GK + + G GLNL + + + WW+ Q Sbjct: 766 ALLTGQTRDRR-TPVKEFQSGKRQIFLISLKAGGVGLNLTEADTV-IHYDPWWNPATENQ 823 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 +R + G ++ VFVY +IA+ T++E + R KS + +L+ K Sbjct: 824 ATDRA-----YRIGQEKPVFVYKMIARGTVEEKIQLLQREKSDLAAGVLDGRK 871 >gi|19704495|ref|NP_604057.1| SWF/SNF family helicase [Fusobacterium nucleatum subsp. nucleatum ATCC 25586] gi|19714769|gb|AAL95356.1| SWF/SNF family helicase [Fusobacterium nucleatum subsp. nucleatum ATCC 25586] Length = 1089 Score = 41.2 bits (95), Expect = 0.086, Method: Compositional matrix adjust. Identities = 23/95 (24%), Positives = 43/95 (45%), Gaps = 6/95 (6%) Query: 101 IQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 ++ + +PL + G GLNL ++++ WW++ Q R + G Sbjct: 979 VENFQNEAVPLFLISLKAGGTGLNLT-KASVVIHLDPWWNISAQNQ-----ATDRAHRIG 1032 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 + V V+ LI +NTI+E +L K + D+ + Sbjct: 1033 QEDTVQVFNLITKNTIEEKILNLQSKKKELSDIFV 1067 >gi|226307557|ref|YP_002767517.1| helicase [Rhodococcus erythropolis PR4] gi|226186674|dbj|BAH34778.1| putative helicase [Rhodococcus erythropolis PR4] Length = 1060 Score = 41.2 bits (95), Expect = 0.087, Method: Composition-based stats. Identities = 27/97 (27%), Positives = 45/97 (46%), Gaps = 6/97 (6%) Query: 101 IQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 ++E+ G P+ + G GLNL + WW+ Q ++R + G Sbjct: 952 LEEFKSGVAPVFLISLKAGGFGLNLTEADYCFIL-DPWWNPAAEAQAVDR-----THRIG 1005 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 R V VY LIA++TI+E V+ KS + +++A Sbjct: 1006 QTRNVMVYRLIAKDTIEEKVMALKAKKSALFSNVMDA 1042 >gi|149200479|ref|ZP_01877493.1| hypothetical protein LNTAR_13447 [Lentisphaera araneosa HTCC2155] gi|149136441|gb|EDM24880.1| hypothetical protein LNTAR_13447 [Lentisphaera araneosa HTCC2155] Length = 1021 Score = 41.2 bits (95), Expect = 0.087, Method: Compositional matrix adjust. Identities = 38/163 (23%), Positives = 71/163 (43%), Gaps = 17/163 (10%) Query: 44 EEKHWKEVHDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQK---------AFPQGR 92 EE KE+ K + + ++E + ++ +V F S L+ +++ + G Sbjct: 845 EEFKAKEIESSKFQLFQELVEEIRDSSHRALVFSQFTSMLSLMREWLDEQGIKYCYLDGS 904 Query: 93 TLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIG 152 T + Q + I + G GLNL G + ++ + WW+ M+ Sbjct: 905 TKKRQDLVDQFNEDDSIQFFLLSLKAGGTGLNLT-GADTVIHYDNWWN-----PMVVNQA 958 Query: 153 VTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 R + G R V + L+AQNTI++ ++Q +TK + D L+ Sbjct: 959 SDRAHRIGQTRNVNIIKLVAQNTIEDKIIQLQKTKEKLFDQLV 1001 >gi|299753319|ref|XP_001833199.2| SNF2 family domain-containing protein [Coprinopsis cinerea okayama7#130] gi|298410246|gb|EAU88472.2| SNF2 family domain-containing protein [Coprinopsis cinerea okayama7#130] Length = 840 Score = 41.2 bits (95), Expect = 0.088, Method: Compositional matrix adjust. Identities = 27/98 (27%), Positives = 48/98 (48%), Gaps = 8/98 (8%) Query: 101 IQEWNE--GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQ 158 + ++N+ GK + + G G+NL G N L+ F W+ QQ + R+ + Sbjct: 658 VDQFNDPNGKEFIFLLSSKAGGCGINL-IGANRLILFDPDWNPAADQQALARVW-----R 711 Query: 159 AGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 G K+ FVY I+ TI+E + QR +K + +++ Sbjct: 712 DGQKKECFVYRFISTGTIEEKIFQRQASKQALSSAVVD 749 >gi|17508659|ref|NP_492438.1| RADiation sensitivity abnormal/yeast RAD-related family member (rad-54) [Caenorhabditis elegans] gi|6580237|emb|CAB63308.1| C. elegans protein W06D4.6, partially confirmed by transcript evidence [Caenorhabditis elegans] gi|6580248|emb|CAA22254.2| C. elegans protein W06D4.6, partially confirmed by transcript evidence [Caenorhabditis elegans] Length = 818 Score = 41.2 bits (95), Expect = 0.089, Method: Compositional matrix adjust. Identities = 25/78 (32%), Positives = 39/78 (50%), Gaps = 6/78 (7%) Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 G GLNL G N LV F W+ Q + R+ + G K+ F+Y L+A +I+E Sbjct: 628 GCGLNL-IGANRLVMFDPDWNPANDDQAMARVW-----RDGQKKMCFIYRLLATGSIEEK 681 Query: 180 VLQRLRTKSTIQDLLLNA 197 + QR K + +++A Sbjct: 682 MFQRQTHKKALSSCVVDA 699 >gi|162312570|ref|XP_001713118.1| SNF2 family helicase Swr1 [Schizosaccharomyces pombe 972h-] gi|46397086|sp|O13682|SWR1_SCHPO RecName: Full=Helicase swr1 gi|159884045|emb|CAA22447.2| SNF2 family helicase Swr1 [Schizosaccharomyces pombe] Length = 1288 Score = 41.2 bits (95), Expect = 0.089, Method: Compositional matrix adjust. Identities = 26/94 (27%), Positives = 47/94 (50%), Gaps = 12/94 (12%) Query: 105 NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLE---EHQQMIERIGVTRQRQAGF 161 N+ KIP+ S G G+NL G + ++F+ W+ + + Q RIG TR Sbjct: 1055 NDDKIPVFILSTRSGGLGINLT-GADTVIFYDSDWNPQLDAQAQDRSHRIGQTRD----- 1108 Query: 162 KRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 V +Y LI++ T++ +L+R K + +++ Sbjct: 1109 ---VHIYRLISEYTVESNMLRRANQKRMLDKIVI 1139 >gi|326484392|gb|EGE08402.1| DNA repair and recombination protein RAD54 [Trichophyton equinum CBS 127.97] Length = 820 Score = 41.2 bits (95), Expect = 0.089, Method: Compositional matrix adjust. Identities = 25/78 (32%), Positives = 39/78 (50%), Gaps = 6/78 (7%) Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 G G+NL G N LV F W+ QQ + R+ + G + FVY IA TI+E Sbjct: 654 GCGINL-VGANRLVLFDPDWNPAADQQALARVW-----RDGQSKDCFVYRFIATGTIEEK 707 Query: 180 VLQRLRTKSTIQDLLLNA 197 + QR K ++ ++++ Sbjct: 708 IFQRQSHKQSLSSCVVDS 725 >gi|167757932|ref|ZP_02430059.1| hypothetical protein CLOSCI_00267 [Clostridium scindens ATCC 35704] gi|167664364|gb|EDS08494.1| hypothetical protein CLOSCI_00267 [Clostridium scindens ATCC 35704] Length = 470 Score = 41.2 bits (95), Expect = 0.090, Method: Compositional matrix adjust. Identities = 29/94 (30%), Positives = 47/94 (50%), Gaps = 6/94 (6%) Query: 107 GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVF 166 G L A+ G LNLQ+ NI ++ S WDL + Q +R+ + G V+ Sbjct: 348 GDSDYLIANRNCAGFSLNLQFCHNI-IYMSNDWDLGKRMQSEDRV-----HRLGQGHDVY 401 Query: 167 VYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKK 200 + + A+NTIDE +L+ L K I + + + + K Sbjct: 402 ITDICAENTIDEQILKCLSRKENILECIKSDIGK 435 >gi|254578924|ref|XP_002495448.1| ZYRO0B11638p [Zygosaccharomyces rouxii] gi|238938338|emb|CAR26515.1| ZYRO0B11638p [Zygosaccharomyces rouxii] Length = 1478 Score = 41.2 bits (95), Expect = 0.091, Method: Compositional matrix adjust. Identities = 23/74 (31%), Positives = 39/74 (52%), Gaps = 6/74 (8%) Query: 118 SCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 + G G+NL +++F S W + Q M R + G K V VY L++++T++ Sbjct: 780 AGGLGINLMTADTVIIFDSDWNPQADLQAM------ARAHRIGQKNHVMVYRLVSKDTVE 833 Query: 178 ELVLQRLRTKSTIQ 191 E VL+R R K ++ Sbjct: 834 EEVLERARKKMILE 847 >gi|195342153|ref|XP_002037666.1| GM18177 [Drosophila sechellia] gi|194132516|gb|EDW54084.1| GM18177 [Drosophila sechellia] Length = 717 Score = 41.2 bits (95), Expect = 0.091, Method: Compositional matrix adjust. Identities = 23/77 (29%), Positives = 40/77 (51%), Gaps = 6/77 (7%) Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 G GLNL G N L F W+ +Q + R+ + G K+ ++Y L+A +I+E Sbjct: 513 GCGLNL-IGANRLFMFDPDWNPANDEQAMARVW-----RDGQKKPCYIYRLVASGSIEEK 566 Query: 180 VLQRLRTKSTIQDLLLN 196 +LQR K ++ +++ Sbjct: 567 ILQRQTHKKSLSSTIID 583 >gi|119964500|ref|YP_949262.1| helicase/SNF2 family domain-containing protein [Arthrobacter aurescens TC1] gi|119951359|gb|ABM10270.1| putative helicase/SNF2 family domain protein [Arthrobacter aurescens TC1] Length = 1151 Score = 41.2 bits (95), Expect = 0.092, Method: Composition-based stats. Identities = 25/90 (27%), Positives = 41/90 (45%), Gaps = 6/90 (6%) Query: 101 IQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 + E+ G P+ + G GLNL + + WW+ Q ++R + G Sbjct: 1042 VSEFKNGAAPVFLISLKAGGFGLNLTEADYVFLL-DPWWNPASEAQAVDR-----THRIG 1095 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 R V VY L+A++TI+E V+ KS + Sbjct: 1096 QARNVMVYRLVAKDTIEEKVMALKAKKSQL 1125 >gi|193083817|gb|ACF09499.1| helicase SNF2/RAD54 family [uncultured marine crenarchaeote SAT1000-23-F7] Length = 571 Score = 41.2 bits (95), Expect = 0.092, Method: Compositional matrix adjust. Identities = 33/107 (30%), Positives = 47/107 (43%), Gaps = 7/107 (6%) Query: 91 GRTLDKD-PCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIE 149 G DKD I + G L+ A + G+NL ++F L W H+Q + Sbjct: 443 GGQTDKDRQANIDRFQNGDTKLMIAGLRAGNLGINLTRA-KYVIFGELDWSPAIHRQAED 501 Query: 150 RIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 R+ + G K VF YYLI T+DE V L KS D +++ Sbjct: 502 RL-----HRIGQKNTVFAYYLIGNGTLDEHVANILVDKSYEIDTIMD 543 >gi|302525636|ref|ZP_07277978.1| LOW QUALITY PROTEIN: SNF2/RAD54 family helicase [Streptomyces sp. AA4] gi|302434531|gb|EFL06347.1| LOW QUALITY PROTEIN: SNF2/RAD54 family helicase [Streptomyces sp. AA4] Length = 713 Score = 41.2 bits (95), Expect = 0.093, Method: Composition-based stats. Identities = 25/97 (25%), Positives = 46/97 (47%), Gaps = 6/97 (6%) Query: 101 IQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 + + G++P+ + G GLNL ++ + + WW+ +E R + G Sbjct: 601 VAAFQSGEVPVFLLSLKAGGVGLNLTQATHV-IHYDRWWN-----PAVEDQATDRAYRIG 654 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 R V V+ LIA+ T++E + L TK + D ++ A Sbjct: 655 QDRPVQVHRLIAEGTLEERIAAVLETKRGLADAVVGA 691 >gi|307199888|gb|EFN80285.1| DNA repair and recombination protein RAD54B [Harpegnathos saltator] Length = 509 Score = 41.2 bits (95), Expect = 0.094, Method: Compositional matrix adjust. Identities = 30/92 (32%), Positives = 48/92 (52%), Gaps = 8/92 (8%) Query: 105 NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA 164 +E KI LL A G GLNL G + LV F W+ Q + RI + G K+ Sbjct: 311 DESKILLLSAKAG--GVGLNLP-GASRLVLFDSDWNPASDMQAMARIW-----RDGQKKD 362 Query: 165 VFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 V++Y L+ TI+E + QR +K+ + + +++ Sbjct: 363 VYIYRLLTTGTIEEKIYQRQISKAGLSEFVVD 394 >gi|281211035|gb|EFA85201.1| myb domain-containing protein [Polysphondylium pallidum PN500] Length = 2415 Score = 41.2 bits (95), Expect = 0.094, Method: Composition-based stats. Identities = 29/95 (30%), Positives = 47/95 (49%), Gaps = 12/95 (12%) Query: 106 EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLE---EHQQMIERIGVTRQRQAGFK 162 + KI L S G GLNL G + ++F+ W+ + Q RIG TR+ Sbjct: 1327 DNKIFLFILSTRSGGLGLNLT-GADTVIFYDTDWNPSMDAQAQDRCHRIGQTRE------ 1379 Query: 163 RAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 V +Y LI Q+TI+E +L++ K + D+++ Sbjct: 1380 --VNIYRLITQHTIEENILRKSNQKRQLDDVVIQG 1412 >gi|237654129|ref|YP_002890443.1| SNF2-related protein [Thauera sp. MZ1T] gi|237625376|gb|ACR02066.1| SNF2-related protein [Thauera sp. MZ1T] Length = 1100 Score = 41.2 bits (95), Expect = 0.094, Method: Composition-based stats. Identities = 21/96 (21%), Positives = 48/96 (50%), Gaps = 6/96 (6%) Query: 101 IQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 ++++ +G++P+ + G GLNL + ++ + WW+ Q + R + G Sbjct: 985 VEDFQKGRVPVFLISLKAGGVGLNLT-AADTVIHYDPWWNPAAENQATD-----RAHRIG 1038 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + VFV+ L+ +I+E +L K+ + + +L+ Sbjct: 1039 QDKPVFVFKLVCAGSIEEKILALQERKAALAESVLS 1074 >gi|241640781|ref|XP_002410926.1| conserved hypothetical protein [Ixodes scapularis] gi|215503624|gb|EEC13118.1| conserved hypothetical protein [Ixodes scapularis] Length = 654 Score = 41.2 bits (95), Expect = 0.094, Method: Compositional matrix adjust. Identities = 25/78 (32%), Positives = 40/78 (51%), Gaps = 6/78 (7%) Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 G GLNL G N LV F W+ Q + RI + G K+ +VY L++ +I+E Sbjct: 487 GCGLNL-IGANRLVMFDPDWNPANDAQAMARIW-----RDGQKKPCYVYRLVSSGSIEEK 540 Query: 180 VLQRLRTKSTIQDLLLNA 197 +LQR K + ++++ Sbjct: 541 ILQRQTHKKALSSCVVDS 558 >gi|315053993|ref|XP_003176371.1| DNA repair and recombination protein RAD54 [Arthroderma gypseum CBS 118893] gi|311338217|gb|EFQ97419.1| DNA repair and recombination protein RAD54 [Arthroderma gypseum CBS 118893] Length = 831 Score = 41.2 bits (95), Expect = 0.095, Method: Compositional matrix adjust. Identities = 25/78 (32%), Positives = 39/78 (50%), Gaps = 6/78 (7%) Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 G G+NL G N LV F W+ QQ + R+ + G + FVY IA TI+E Sbjct: 665 GCGINL-VGANRLVLFDPDWNPAADQQALARVW-----RDGQSKDCFVYRFIATGTIEEK 718 Query: 180 VLQRLRTKSTIQDLLLNA 197 + QR K ++ ++++ Sbjct: 719 IFQRQSHKQSLSSCVVDS 736 >gi|168019895|ref|XP_001762479.1| SWR1 complex protein, SNF2 family DNA-dependent ATPase [Physcomitrella patens subsp. patens] gi|162686212|gb|EDQ72602.1| SWR1 complex protein, SNF2 family DNA-dependent ATPase [Physcomitrella patens subsp. patens] Length = 1780 Score = 41.2 bits (95), Expect = 0.095, Method: Compositional matrix adjust. Identities = 30/94 (31%), Positives = 49/94 (52%), Gaps = 14/94 (14%) Query: 108 KIPLLFAHPASCGHGLNLQYGGNILVFFSLWW----DLEEHQQMIERIGVTRQRQAGFKR 163 KI L S G G+NL G + ++F+ W DL+ Q RIG TR+ Sbjct: 1113 KIFLFILSTRSGGVGINL-VGADTVIFYDSDWNPAMDLQA-QDRCHRIGQTRE------- 1163 Query: 164 AVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 V +Y LI+++TI+E +L++ K + DL++ + Sbjct: 1164 -VHIYRLISESTIEENILKKANQKRILDDLVIQS 1196 >gi|156838524|ref|XP_001642966.1| hypothetical protein Kpol_1071p14 [Vanderwaltozyma polyspora DSM 70294] gi|156113549|gb|EDO15108.1| hypothetical protein Kpol_1071p14 [Vanderwaltozyma polyspora DSM 70294] Length = 353 Score = 41.2 bits (95), Expect = 0.095, Method: Compositional matrix adjust. Identities = 42/156 (26%), Positives = 71/156 (45%), Gaps = 23/156 (14%) Query: 44 EEKHWKEVHDEKIKAL----EVIIEKANAAPIIVAYHFNSDLARLQK-------AFPQ-- 90 + K+ +EV K+K L + I + +N +++ ++ L ++K +F + Sbjct: 45 DSKYNREVDSGKLKVLSELLKSITQISNKEKVVIVSNYTQTLDIIEKMLHSLSLSFTRLD 104 Query: 91 GRTLDKDPCTIQEWNEGKIPLLFA---HPASCGHGLNLQYGGNILVFFSLWWDLEEHQQM 147 G T ++ +I + P +FA S G GLNL G + L+ F W+ Q Sbjct: 105 GSTPNRQRDSIVSL-FNRSPHVFAFLLSAKSGGVGLNL-IGASRLILFDNDWNPAIDLQA 162 Query: 148 IERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQR 183 + RI + G KR F+Y L+ IDE +LQR Sbjct: 163 MSRI-----HRDGQKRPCFIYRLVTTGCIDEKILQR 193 >gi|281208073|gb|EFA82251.1| SNF2-related domain-containing protein [Polysphondylium pallidum PN500] Length = 2100 Score = 40.8 bits (94), Expect = 0.098, Method: Composition-based stats. Identities = 26/84 (30%), Positives = 42/84 (50%), Gaps = 6/84 (7%) Query: 118 SCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 +CG G+NL ++ F S W + Q M R + G + V VY LI + T++ Sbjct: 1849 ACGIGINLTSADTVIFFDSDWNPTMDEQAM------DRCHRLGQLKPVTVYRLITKGTVE 1902 Query: 178 ELVLQRLRTKSTIQDLLLNALKKE 201 E V++R + K IQ +++ K E Sbjct: 1903 EKVIKRAKQKHQIQSIVIAGGKFE 1926 >gi|260221226|emb|CBA29577.1| hypothetical protein Csp_A12850 [Curvibacter putative symbiont of Hydra magnipapillata] Length = 784 Score = 40.8 bits (94), Expect = 0.099, Method: Composition-based stats. Identities = 24/95 (25%), Positives = 45/95 (47%), Gaps = 6/95 (6%) Query: 101 IQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 +Q + ++P+L + G GLNL + ++ WW+ +E R + G Sbjct: 647 VQRFQNQEVPVLLVSLKTGGVGLNLT-AADTVIHMDPWWN-----PAVEEQATARAHRIG 700 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 + VFVY L+ + +I+E +L+ K + D +L Sbjct: 701 QDQPVFVYKLVVEGSIEERMLELQARKLALSDSVL 735 >gi|251778792|ref|ZP_04821712.1| SWI/SNF family helicase [Clostridium botulinum E1 str. 'BoNT E Beluga'] gi|243083107|gb|EES48997.1| SWI/SNF family helicase [Clostridium botulinum E1 str. 'BoNT E Beluga'] Length = 1086 Score = 40.8 bits (94), Expect = 0.099, Method: Composition-based stats. Identities = 27/95 (28%), Positives = 47/95 (49%), Gaps = 6/95 (6%) Query: 101 IQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 + ++NEG+ + + G GLNL +I++ F WW+ +E R + G Sbjct: 975 VDDFNEGENNVFLVSLKAGGTGLNLT-SADIVIHFDPWWN-----PAVEDQATDRAHRIG 1028 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 + V V LIAQ TI+E +++ +K + D +L Sbjct: 1029 QENTVEVIKLIAQGTIEEKIVELQDSKRKLIDTIL 1063 >gi|170087336|ref|XP_001874891.1| DNA repair protein, SNF2 family [Laccaria bicolor S238N-H82] gi|164650091|gb|EDR14332.1| DNA repair protein, SNF2 family [Laccaria bicolor S238N-H82] Length = 816 Score = 40.8 bits (94), Expect = 0.099, Method: Compositional matrix adjust. Identities = 26/91 (28%), Positives = 43/91 (47%), Gaps = 6/91 (6%) Query: 106 EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 +GK + + G G+NL G N L+ F W+ QQ + R+ + G K+ Sbjct: 641 DGKEFIFLLSSKAGGCGINL-IGANRLILFDPDWNPAADQQALARVW-----RDGQKKEC 694 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 FVY I+ TI+E + QR K + +++ Sbjct: 695 FVYRFISTGTIEEKIFQRQANKQALSSAVVD 725 >gi|321262603|ref|XP_003196020.1| ATPase; Ino80p [Cryptococcus gattii WM276] gi|317462495|gb|ADV24233.1| ATPase, putative; Ino80p [Cryptococcus gattii WM276] Length = 1813 Score = 40.8 bits (94), Expect = 0.100, Method: Composition-based stats. Identities = 23/76 (30%), Positives = 41/76 (53%), Gaps = 6/76 (7%) Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 G G+NL + ++F+ W+ Q ++R + G + V VY L+A+ TI+E Sbjct: 1580 GLGINLT-AADTVIFYDHDWNPSSDAQAMDR-----AHRVGQTKQVTVYRLVARGTIEER 1633 Query: 180 VLQRLRTKSTIQDLLL 195 +LQ R K +QD+++ Sbjct: 1634 ILQMARGKKDVQDVVV 1649 >gi|229102446|ref|ZP_04233153.1| Helicase, SWF/SNF [Bacillus cereus Rock3-28] gi|228680931|gb|EEL35101.1| Helicase, SWF/SNF [Bacillus cereus Rock3-28] Length = 1068 Score = 40.8 bits (94), Expect = 0.10, Method: Compositional matrix adjust. Identities = 27/87 (31%), Positives = 41/87 (47%), Gaps = 6/87 (6%) Query: 104 WNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKR 163 +NEG+ L + G GLNL G + ++ + LWW+ QQ R + G K Sbjct: 962 FNEGEGDLFLISLKAGGTGLNLT-GADTVILYDLWWNPAVEQQ-----AADRAYRMGQKN 1015 Query: 164 AVFVYYLIAQNTIDELVLQRLRTKSTI 190 V V L+A TI+E + + TK + Sbjct: 1016 TVQVIKLVAHGTIEEKMHELQETKKNL 1042 >gi|229074784|ref|ZP_04207799.1| Helicase, SWF/SNF [Bacillus cereus Rock4-18] gi|228708296|gb|EEL60454.1| Helicase, SWF/SNF [Bacillus cereus Rock4-18] Length = 1068 Score = 40.8 bits (94), Expect = 0.10, Method: Compositional matrix adjust. Identities = 27/87 (31%), Positives = 41/87 (47%), Gaps = 6/87 (6%) Query: 104 WNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKR 163 +NEG+ L + G GLNL G + ++ + LWW+ QQ R + G K Sbjct: 962 FNEGEGDLFLISLKAGGTGLNLT-GADTVILYDLWWNPAVEQQ-----AADRAYRMGQKN 1015 Query: 164 AVFVYYLIAQNTIDELVLQRLRTKSTI 190 V V L+A TI+E + + TK + Sbjct: 1016 TVQVIKLVAHGTIEEKMHELQETKKNL 1042 >gi|226360588|ref|YP_002778366.1| helicase [Rhodococcus opacus B4] gi|226239073|dbj|BAH49421.1| putative helicase [Rhodococcus opacus B4] Length = 934 Score = 40.8 bits (94), Expect = 0.10, Method: Composition-based stats. Identities = 25/96 (26%), Positives = 44/96 (45%), Gaps = 6/96 (6%) Query: 101 IQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 ++ + G +P+L + G GLNL ++ V F WW+ +E R + G Sbjct: 815 VERFQSGDVPVLILSLKAAGTGLNLTRADHV-VHFDRWWN-----PAVEDQATDRAYRIG 868 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 V V+ L+ TI+E + L +K + D +L+ Sbjct: 869 QTHPVVVHRLVTAGTIEEHIAAMLASKRQLADSVLS 904 >gi|259146092|emb|CAY79352.1| Chd1p [Saccharomyces cerevisiae EC1118] gi|323348857|gb|EGA83095.1| Chd1p [Saccharomyces cerevisiae Lalvin QA23] Length = 1468 Score = 40.8 bits (94), Expect = 0.10, Method: Compositional matrix adjust. Identities = 23/74 (31%), Positives = 39/74 (52%), Gaps = 6/74 (8%) Query: 118 SCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 + G G+NL +++F S W + Q M R + G K V VY L++++T++ Sbjct: 773 AGGLGINLMTADTVVIFDSDWNPQADLQAM------ARAHRIGQKNHVMVYRLVSKDTVE 826 Query: 178 ELVLQRLRTKSTIQ 191 E VL+R R K ++ Sbjct: 827 EEVLERARKKMILE 840 >gi|256271313|gb|EEU06383.1| Chd1p [Saccharomyces cerevisiae JAY291] Length = 1468 Score = 40.8 bits (94), Expect = 0.10, Method: Compositional matrix adjust. Identities = 23/74 (31%), Positives = 39/74 (52%), Gaps = 6/74 (8%) Query: 118 SCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 + G G+NL +++F S W + Q M R + G K V VY L++++T++ Sbjct: 773 AGGLGINLMTADTVVIFDSDWNPQADLQAM------ARAHRIGQKNHVMVYRLVSKDTVE 826 Query: 178 ELVLQRLRTKSTIQ 191 E VL+R R K ++ Sbjct: 827 EEVLERARKKMILE 840 >gi|19115879|ref|NP_594967.1| ATP-dependent DNA helicase Hrp3 [Schizosaccharomyces pombe 972h-] gi|15214050|sp|O14139|HRP3_SCHPO RecName: Full=Chromodomain helicase hrp3; AltName: Full=ATP-dependent helicase hrp3 gi|2408073|emb|CAB16277.1| ATP-dependent DNA helicase Hrp3 [Schizosaccharomyces pombe] Length = 1388 Score = 40.8 bits (94), Expect = 0.10, Method: Compositional matrix adjust. Identities = 27/95 (28%), Positives = 45/95 (47%), Gaps = 8/95 (8%) Query: 99 CTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 +I +N P + + G G+NL +++F S W + Q M R Sbjct: 747 TSIDHFNAPNSPDFVFLLSTRAGGLGINLMTADTVIIFDSDWNPQADLQAM------ARA 800 Query: 157 RQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQ 191 + G K V VY L++++TI+E VL+R R K ++ Sbjct: 801 HRIGQKNHVMVYRLLSKDTIEEDVLERARRKMILE 835 >gi|151944881|gb|EDN63140.1| RNA polymerase II elongation factor [Saccharomyces cerevisiae YJM789] Length = 1468 Score = 40.8 bits (94), Expect = 0.10, Method: Compositional matrix adjust. Identities = 23/74 (31%), Positives = 39/74 (52%), Gaps = 6/74 (8%) Query: 118 SCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 + G G+NL +++F S W + Q M R + G K V VY L++++T++ Sbjct: 773 AGGLGINLMTADTVVIFDSDWNPQADLQAM------ARAHRIGQKNHVMVYRLVSKDTVE 826 Query: 178 ELVLQRLRTKSTIQ 191 E VL+R R K ++ Sbjct: 827 EEVLERARKKMILE 840 >gi|67594179|ref|XP_665781.1| RAD26-like dna repair and recombination protein [Cryptosporidium hominis TU502] gi|54656607|gb|EAL35548.1| RAD26-like dna repair and recombination protein [Cryptosporidium hominis] Length = 822 Score = 40.8 bits (94), Expect = 0.10, Method: Compositional matrix adjust. Identities = 31/107 (28%), Positives = 50/107 (46%), Gaps = 11/107 (10%) Query: 78 NSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGH-GLNLQYGGNILVFFS 136 N D+ L + P L ++ +N+ + LF + G GLN+ G N ++ + Sbjct: 405 NKDVLTLDGSTP----LSTRFSLVKRFNQNQSIFLFILTSRVGGVGLNIT-GANRVILYD 459 Query: 137 LWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQR 183 WW+ Q ER + G K+ V VY LI ++TI+E + QR Sbjct: 460 PWWNPMTDVQAKERCW-----RIGQKKEVIVYRLITRDTIEEKIFQR 501 >gi|291441044|ref|ZP_06580434.1| SNF2/RAD54 family helicase [Streptomyces ghanaensis ATCC 14672] gi|291343939|gb|EFE70895.1| SNF2/RAD54 family helicase [Streptomyces ghanaensis ATCC 14672] Length = 619 Score = 40.8 bits (94), Expect = 0.10, Method: Composition-based stats. Identities = 23/97 (23%), Positives = 48/97 (49%), Gaps = 6/97 (6%) Query: 101 IQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 ++ + +G++P+ + G GLNL ++ V + WW+ +E R + G Sbjct: 505 VRRFQDGEVPVFLLSLKAAGTGLNLTRAEHV-VHYDRWWN-----PAVEAQATDRAYRIG 558 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 R V V+ +IA+ T+++ + + L K + D +L + Sbjct: 559 QTRPVQVHRIIAEGTVEDRIAELLVRKRELADAVLGS 595 >gi|239932688|ref|ZP_04689641.1| helicase [Streptomyces ghanaensis ATCC 14672] Length = 624 Score = 40.8 bits (94), Expect = 0.10, Method: Composition-based stats. Identities = 23/97 (23%), Positives = 48/97 (49%), Gaps = 6/97 (6%) Query: 101 IQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 ++ + +G++P+ + G GLNL ++ V + WW+ +E R + G Sbjct: 510 VRRFQDGEVPVFLLSLKAAGTGLNLTRAEHV-VHYDRWWN-----PAVEAQATDRAYRIG 563 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 R V V+ +IA+ T+++ + + L K + D +L + Sbjct: 564 QTRPVQVHRIIAEGTVEDRIAELLVRKRELADAVLGS 600 >gi|229096334|ref|ZP_04227307.1| Helicase, SWF/SNF [Bacillus cereus Rock3-29] gi|228687294|gb|EEL41199.1| Helicase, SWF/SNF [Bacillus cereus Rock3-29] Length = 1068 Score = 40.8 bits (94), Expect = 0.10, Method: Compositional matrix adjust. Identities = 27/87 (31%), Positives = 41/87 (47%), Gaps = 6/87 (6%) Query: 104 WNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKR 163 +NEG+ L + G GLNL G + ++ + LWW+ QQ R + G K Sbjct: 962 FNEGEGDLFLISLKAGGTGLNLT-GADTVILYDLWWNPAVEQQ-----AADRAYRMGQKN 1015 Query: 164 AVFVYYLIAQNTIDELVLQRLRTKSTI 190 V V L+A TI+E + + TK + Sbjct: 1016 TVQVIKLVAHGTIEEKMHELQETKKNL 1042 >gi|195550742|ref|XP_002076092.1| GD12001 [Drosophila simulans] gi|194201741|gb|EDX15317.1| GD12001 [Drosophila simulans] Length = 783 Score = 40.8 bits (94), Expect = 0.10, Method: Compositional matrix adjust. Identities = 23/77 (29%), Positives = 40/77 (51%), Gaps = 6/77 (7%) Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 G GLNL G N L F W+ +Q + R+ + G K+ ++Y L+A +I+E Sbjct: 579 GCGLNL-IGANRLFMFDPDWNPANDEQAMARVW-----RDGQKKPCYIYRLVASGSIEEK 632 Query: 180 VLQRLRTKSTIQDLLLN 196 +LQR K ++ +++ Sbjct: 633 ILQRQTHKKSLSSTIID 649 >gi|195116621|ref|XP_002002852.1| GI10760 [Drosophila mojavensis] gi|292630864|sp|B4KHL5|RAD54_DROMO RecName: Full=DNA repair and recombination protein RAD54-like; AltName: Full=Protein okra gi|193913427|gb|EDW12294.1| GI10760 [Drosophila mojavensis] Length = 783 Score = 40.8 bits (94), Expect = 0.10, Method: Compositional matrix adjust. Identities = 23/77 (29%), Positives = 40/77 (51%), Gaps = 6/77 (7%) Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 G GLNL G N L F W+ +Q + R+ + G K+ ++Y L+A +I+E Sbjct: 574 GCGLNL-IGANRLFMFDPDWNPANDEQAMARVW-----RDGQKKPCYIYRLVASGSIEEK 627 Query: 180 VLQRLRTKSTIQDLLLN 196 +LQR K ++ +++ Sbjct: 628 ILQRQTHKKSLSSTIID 644 >gi|229115289|ref|ZP_04244698.1| Helicase, SWF/SNF [Bacillus cereus Rock1-3] gi|228668121|gb|EEL23554.1| Helicase, SWF/SNF [Bacillus cereus Rock1-3] Length = 1068 Score = 40.8 bits (94), Expect = 0.11, Method: Compositional matrix adjust. Identities = 27/87 (31%), Positives = 41/87 (47%), Gaps = 6/87 (6%) Query: 104 WNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKR 163 +NEG+ L + G GLNL G + ++ + LWW+ QQ R + G K Sbjct: 962 FNEGEGDLFLISLKAGGTGLNLT-GADTVILYDLWWNPAVEQQ-----AADRAYRMGQKN 1015 Query: 164 AVFVYYLIAQNTIDELVLQRLRTKSTI 190 V V L+A TI+E + + TK + Sbjct: 1016 TVQVIKLVAHGTIEEKMHELQETKKNL 1042 >gi|6321012|ref|NP_011091.1| Chd1p [Saccharomyces cerevisiae S288c] gi|418395|sp|P32657|CHD1_YEAST RecName: Full=Chromo domain-containing protein 1; AltName: Full=ATP-dependent helicase CHD1 gi|603404|gb|AAB64691.1| Chd1p: transcriptional regulator [Saccharomyces cerevisiae] gi|285811798|tpg|DAA07826.1| TPA: Chd1p [Saccharomyces cerevisiae S288c] Length = 1468 Score = 40.8 bits (94), Expect = 0.11, Method: Compositional matrix adjust. Identities = 23/74 (31%), Positives = 39/74 (52%), Gaps = 6/74 (8%) Query: 118 SCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 + G G+NL +++F S W + Q M R + G K V VY L++++T++ Sbjct: 773 AGGLGINLMTADTVVIFDSDWNPQADLQAM------ARAHRIGQKNHVMVYRLVSKDTVE 826 Query: 178 ELVLQRLRTKSTIQ 191 E VL+R R K ++ Sbjct: 827 EEVLERARKKMILE 840 >gi|115891453|ref|XP_781410.2| PREDICTED: similar to Chromodomain helicase DNA binding protein 1 [Strongylocentrotus purpuratus] gi|115930718|ref|XP_001181304.1| PREDICTED: similar to Chromodomain helicase DNA binding protein 1 [Strongylocentrotus purpuratus] Length = 1335 Score = 40.8 bits (94), Expect = 0.11, Method: Compositional matrix adjust. Identities = 22/79 (27%), Positives = 41/79 (51%), Gaps = 6/79 (7%) Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 G GLNL +++F S W + Q M R + G +R V +Y L+ ++TI+E Sbjct: 872 GLGLNLASADTVIIFDSDWNPQNDIQAM------ARAHRIGQRRQVNIYRLVTKDTIEEE 925 Query: 180 VLQRLRTKSTIQDLLLNAL 198 +++R + K + L++ + Sbjct: 926 IIERAKRKMVLDHLVIQRM 944 >gi|328861412|gb|EGG10515.1| hypothetical protein MELLADRAFT_47048 [Melampsora larici-populina 98AG31] Length = 676 Score = 40.8 bits (94), Expect = 0.11, Method: Compositional matrix adjust. Identities = 41/145 (28%), Positives = 63/145 (43%), Gaps = 18/145 (12%) Query: 54 EKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFP---------QGRTL--DKDPCTIQ 102 EK+K L VI K+ + I++ F LA L+K G T D+ P + Sbjct: 482 EKLKEL-VIRLKSKGSRILIFSQFTQMLAILEKVMECIGVKFLILTGSTSVGDRQPLVDE 540 Query: 103 EWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFK 162 N+ I + + G GLNL +++F D H +R R + G K Sbjct: 541 FTNDESITVFLLSTKAGGLGLNLMAADTVVIF---DQDFNPHN---DRQAEDRAYRLGQK 594 Query: 163 RAVFVYYLIAQNTIDELVLQRLRTK 187 R V V + ++TI+E +LQ +TK Sbjct: 595 RDVHVIKFVTKHTIEEDILQLAQTK 619 >gi|313898599|ref|ZP_07832134.1| SNF2 family N-terminal domain protein [Clostridium sp. HGF2] gi|312956483|gb|EFR38116.1| SNF2 family N-terminal domain protein [Clostridium sp. HGF2] Length = 1077 Score = 40.8 bits (94), Expect = 0.11, Method: Compositional matrix adjust. Identities = 24/95 (25%), Positives = 42/95 (44%), Gaps = 6/95 (6%) Query: 101 IQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 + +N P+ + G GLNL +++ F WW++ Q R + G Sbjct: 970 VNSFNSDDTPIFLISLKAGGTGLNLT-SAEVVIHFDPWWNVSAQNQ-----ATDRAYRIG 1023 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 V V LIA++TI+E ++Q K + D ++ Sbjct: 1024 QHNNVQVVKLIAKDTIEEKIMQLQSLKQDLSDSII 1058 >gi|237836947|ref|XP_002367771.1| DNA repair protein RAD54, putative [Toxoplasma gondii ME49] gi|211965435|gb|EEB00631.1| DNA repair protein RAD54, putative [Toxoplasma gondii ME49] gi|221482002|gb|EEE20368.1| DNA repair and recombination protein RAD54, putative [Toxoplasma gondii GT1] gi|221505079|gb|EEE30733.1| DNA repair and recombination protein RAD54, putative [Toxoplasma gondii VEG] Length = 693 Score = 40.8 bits (94), Expect = 0.11, Method: Compositional matrix adjust. Identities = 53/193 (27%), Positives = 85/193 (44%), Gaps = 26/193 (13%) Query: 18 ENIEAFNSASKTVKC-LQLANGAVY-YDEEKHWKEVHD----EKIKALE---VIIEKANA 68 E +++F KTV L L+N + YD + D K++ LE + I ++ Sbjct: 479 EVLKSFVPPKKTVAIYLNLSNQQRFAYDTVCKFTLTRDVRMHTKLQFLENLLLSIRSSSN 538 Query: 69 APIIVAYHFNSDLARLQ-----KAFP----QGRTLDKDPCT-IQEWNEGKIPLLFAHPAS 118 I++ +F S L ++ K + G T KD ++ +NE K F + Sbjct: 539 DKIVIVSNFTSTLDNIEIFMQAKGYSFLRLDGSTAVKDRTGLVKTFNESKECFAFLLSSK 598 Query: 119 CGH-GLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 G GLNL G N LV W+ QQ + R+ + G V++Y L+ TI+ Sbjct: 599 AGGVGLNL-IGANRLVLLDPDWNPANDQQALARVW-----RPGQINPVYIYRLVGARTIE 652 Query: 178 ELVLQRLRTKSTI 190 E +LQR K+T+ Sbjct: 653 EKILQRQAYKATL 665 >gi|198473012|ref|XP_001356143.2| GA17651 [Drosophila pseudoobscura pseudoobscura] gi|292630937|sp|Q29KH2|RAD54_DROPS RecName: Full=DNA repair and recombination protein RAD54-like; AltName: Full=Protein okra gi|198139260|gb|EAL33203.2| GA17651 [Drosophila pseudoobscura pseudoobscura] Length = 782 Score = 40.8 bits (94), Expect = 0.11, Method: Compositional matrix adjust. Identities = 23/77 (29%), Positives = 40/77 (51%), Gaps = 6/77 (7%) Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 G GLNL G N L F W+ +Q + R+ + G K+ ++Y L+A +I+E Sbjct: 578 GCGLNL-IGANRLFMFDPDWNPANDEQAMARVW-----RDGQKKPCYIYRLVASGSIEEK 631 Query: 180 VLQRLRTKSTIQDLLLN 196 +LQR K ++ +++ Sbjct: 632 ILQRQTHKKSLSSTIID 648 >gi|190405721|gb|EDV08988.1| chromo domain protein 1 [Saccharomyces cerevisiae RM11-1a] Length = 1436 Score = 40.8 bits (94), Expect = 0.11, Method: Compositional matrix adjust. Identities = 23/74 (31%), Positives = 39/74 (52%), Gaps = 6/74 (8%) Query: 118 SCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 + G G+NL +++F S W + Q M R + G K V VY L++++T++ Sbjct: 741 AGGLGINLMTADTVVIFDSDWNPQADLQAM------ARAHRIGQKNHVMVYRLVSKDTVE 794 Query: 178 ELVLQRLRTKSTIQ 191 E VL+R R K ++ Sbjct: 795 EEVLERARKKMILE 808 >gi|296163436|ref|ZP_06846189.1| SNF2-related protein [Burkholderia sp. Ch1-1] gi|295886324|gb|EFG66189.1| SNF2-related protein [Burkholderia sp. Ch1-1] Length = 1117 Score = 40.8 bits (94), Expect = 0.11, Method: Composition-based stats. Identities = 26/106 (24%), Positives = 49/106 (46%), Gaps = 7/106 (6%) Query: 91 GRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 G T D+ I+ + + +PL + G GLNL + ++ + WW+ +E Sbjct: 978 GDTTDRR-TPIRRFQQRAVPLFLISLKAGGVGLNLTA-ADTVIHYDPWWN-----PAVEN 1030 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 R + G + VFVY LI +++E ++ K+ + D +L+ Sbjct: 1031 QATDRAHRLGQDKPVFVYKLITAGSVEEKIVAMQEQKAALADAILS 1076 >gi|229166704|ref|ZP_04294454.1| Helicase, SWF/SNF [Bacillus cereus AH621] gi|228616701|gb|EEK73776.1| Helicase, SWF/SNF [Bacillus cereus AH621] Length = 1064 Score = 40.8 bits (94), Expect = 0.11, Method: Compositional matrix adjust. Identities = 25/75 (33%), Positives = 36/75 (48%), Gaps = 6/75 (8%) Query: 104 WNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKR 163 +NEG+ L + G GLNL G + ++ + LWW+ QQ R + G K Sbjct: 958 FNEGEGDLFLISLKAGGTGLNLT-GADTVILYDLWWNPAVEQQ-----AADRAYRMGQKN 1011 Query: 164 AVFVYYLIAQNTIDE 178 V V L+A TI+E Sbjct: 1012 TVQVIKLVAHGTIEE 1026 >gi|145338703|ref|NP_188552.3| ATRAD54 (ARABIDOPSIS HOMOLOG OF RAD54); ATP binding / DNA binding / helicase/ nucleic acid binding [Arabidopsis thaliana] gi|112419506|dbj|BAF03042.1| Rad54 [Arabidopsis thaliana] gi|116518260|gb|ABJ99465.1| RAD54-like protein [Arabidopsis thaliana] Length = 910 Score = 40.8 bits (94), Expect = 0.11, Method: Compositional matrix adjust. Identities = 26/75 (34%), Positives = 39/75 (52%), Gaps = 6/75 (8%) Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 G GLNL G N LV F W+ +Q R+ + G K+ V+VY ++ TI+E Sbjct: 615 GCGLNL-IGANRLVLFDPDWNPANDKQAAARVW-----RDGQKKRVYVYRFLSTGTIEEK 668 Query: 180 VLQRLRTKSTIQDLL 194 V QR +K +Q ++ Sbjct: 669 VYQRQMSKEGLQKVI 683 >gi|229011148|ref|ZP_04168341.1| Helicase, SWF/SNF [Bacillus mycoides DSM 2048] gi|228750031|gb|EEL99863.1| Helicase, SWF/SNF [Bacillus mycoides DSM 2048] Length = 1064 Score = 40.8 bits (94), Expect = 0.11, Method: Compositional matrix adjust. Identities = 25/75 (33%), Positives = 36/75 (48%), Gaps = 6/75 (8%) Query: 104 WNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKR 163 +NEG+ L + G GLNL G + ++ + LWW+ QQ R + G K Sbjct: 958 FNEGEGDLFLISLKAGGTGLNLT-GADTVILYDLWWNPAVEQQ-----AADRAYRMGQKN 1011 Query: 164 AVFVYYLIAQNTIDE 178 V V L+A TI+E Sbjct: 1012 TVQVIKLVAHGTIEE 1026 >gi|41055574|ref|NP_957438.1| DNA repair and recombination protein RAD54-like [Danio rerio] gi|28277973|gb|AAH46050.1| RAD54-like (S. cerevisiae) [Danio rerio] Length = 738 Score = 40.8 bits (94), Expect = 0.11, Method: Compositional matrix adjust. Identities = 24/77 (31%), Positives = 40/77 (51%), Gaps = 6/77 (7%) Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 G GLNL G N LV F W+ +Q + R+ + G K+ ++Y L++ TI+E Sbjct: 571 GCGLNL-IGANRLVMFDPDWNPANDEQAMARVW-----RDGQKKTCYIYRLLSTGTIEEK 624 Query: 180 VLQRLRTKSTIQDLLLN 196 +LQR K + +++ Sbjct: 625 ILQRQAHKKALSSCVVD 641 >gi|302561960|ref|ZP_07314302.1| SNF2/helicase domain-containing protein [Streptomyces griseoflavus Tu4000] gi|302479578|gb|EFL42671.1| SNF2/helicase domain-containing protein [Streptomyces griseoflavus Tu4000] Length = 652 Score = 40.8 bits (94), Expect = 0.11, Method: Composition-based stats. Identities = 23/97 (23%), Positives = 47/97 (48%), Gaps = 6/97 (6%) Query: 101 IQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 ++ + +G++P+ + G GLNL ++ V + WW+ +E R + G Sbjct: 538 VRRFQDGEVPVFLLSLKAAGTGLNLTRAEHV-VHYDRWWN-----PAVEAQATDRAYRIG 591 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 R V V+ +IA+ T+++ + L K + D +L + Sbjct: 592 QTRPVQVHRIIAEGTVEDRIAALLERKRELADAVLGS 628 >gi|17136368|ref|NP_476661.1| okra [Drosophila melanogaster] gi|74960637|sp|O76460|RAD54_DROME RecName: Full=DNA repair and recombination protein RAD54-like; Short=DmRAD54; AltName: Full=Protein okra; AltName: Full=RAD54 DNA repair protein gi|3264618|gb|AAC24577.1| Rad54 homolog OKR [Drosophila melanogaster] gi|7295868|gb|AAF51168.1| okra [Drosophila melanogaster] gi|220947310|gb|ACL86198.1| okr-PA [synthetic construct] gi|220956782|gb|ACL90934.1| okr-PA [synthetic construct] Length = 784 Score = 40.8 bits (94), Expect = 0.11, Method: Compositional matrix adjust. Identities = 23/77 (29%), Positives = 40/77 (51%), Gaps = 6/77 (7%) Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 G GLNL G N L F W+ +Q + R+ + G K+ ++Y L+A +I+E Sbjct: 580 GCGLNL-IGANRLFMFDPDWNPANDEQAMARVW-----RDGQKKPCYIYRLVASGSIEEK 633 Query: 180 VLQRLRTKSTIQDLLLN 196 +LQR K ++ +++ Sbjct: 634 ILQRQTHKKSLSSTIID 650 >gi|182419549|ref|ZP_02950797.1| DNA/RNA helicase, SNF2 [Clostridium butyricum 5521] gi|237667122|ref|ZP_04527106.1| Non-specific serine/threonine protein kinase [Clostridium butyricum E4 str. BoNT E BL5262] gi|182376584|gb|EDT74159.1| DNA/RNA helicase, SNF2 [Clostridium butyricum 5521] gi|237655470|gb|EEP53026.1| Non-specific serine/threonine protein kinase [Clostridium butyricum E4 str. BoNT E BL5262] Length = 1060 Score = 40.8 bits (94), Expect = 0.11, Method: Composition-based stats. Identities = 34/105 (32%), Positives = 52/105 (49%), Gaps = 8/105 (7%) Query: 101 IQEWNEGKIPLLF-AHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQA 159 ++E+N K +F + G GLNL N+++ F WW+ IE R + Sbjct: 948 VEEFNNDKNKRVFLISLKAGGTGLNLT-SANMVIHFDPWWN-----PSIEDQATDRAHRI 1001 Query: 160 GFKRAVFVYYLIAQNTIDE-LVLQRLRTKSTIQDLLLNALKKETI 203 G KR V V LIA+ TI+E +VL + ++ I D+L N L + Sbjct: 1002 GQKRDVEVIKLIAKGTIEEKIVLLQEDKRNLINDVLTNELNDSEV 1046 >gi|146308259|ref|YP_001188724.1| non-specific serine/threonine protein kinase [Pseudomonas mendocina ymp] gi|145576460|gb|ABP85992.1| Non-specific serine/threonine protein kinase [Pseudomonas mendocina ymp] Length = 876 Score = 40.8 bits (94), Expect = 0.11, Method: Compositional matrix adjust. Identities = 25/100 (25%), Positives = 48/100 (48%), Gaps = 7/100 (7%) Query: 91 GRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 G T D+ ++ + G+ P+ + G GLNL + ++ F WW+ Q +R Sbjct: 756 GSTQDRR-TPVERFQAGEFPVFLISLKAGGSGLNL-TAADTVIHFDPWWNPAAEAQASDR 813 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 + G + VFVY LI + +++E + Q + K+++ Sbjct: 814 A-----YRIGQDKPVFVYKLITRGSVEEKIQQLQQAKASL 848 >gi|319650819|ref|ZP_08004956.1| hypothetical protein HMPREF1013_01562 [Bacillus sp. 2_A_57_CT2] gi|317397417|gb|EFV78118.1| hypothetical protein HMPREF1013_01562 [Bacillus sp. 2_A_57_CT2] Length = 939 Score = 40.8 bits (94), Expect = 0.11, Method: Compositional matrix adjust. Identities = 32/135 (23%), Positives = 60/135 (44%), Gaps = 10/135 (7%) Query: 63 IEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHG 122 IE N ++ F D+ L + P+ ++D I + + + P+ + G G Sbjct: 796 IEMGNMIARLLKKQFGFDVPFLNGSVPKQ---ERD-NMISRFQDHEFPVFLLSLKAGGTG 851 Query: 123 LNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQ 182 LNL N ++ + WW+ +E R + G KR V V+ +IA T++E + Sbjct: 852 LNLTA-ANHVIHYDRWWN-----PAVENQATDRAYRIGQKRFVHVHKMIATGTLEEKIDA 905 Query: 183 RLRTKSTIQDLLLNA 197 L K ++ D ++ + Sbjct: 906 MLEKKQSLNDQIITS 920 >gi|229017133|ref|ZP_04174048.1| Helicase, SWF/SNF [Bacillus cereus AH1273] gi|229023310|ref|ZP_04179819.1| Helicase, SWF/SNF [Bacillus cereus AH1272] gi|228738015|gb|EEL88502.1| Helicase, SWF/SNF [Bacillus cereus AH1272] gi|228744153|gb|EEL94240.1| Helicase, SWF/SNF [Bacillus cereus AH1273] Length = 1064 Score = 40.8 bits (94), Expect = 0.12, Method: Compositional matrix adjust. Identities = 25/75 (33%), Positives = 36/75 (48%), Gaps = 6/75 (8%) Query: 104 WNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKR 163 +NEG+ L + G GLNL G + ++ + LWW+ QQ R + G K Sbjct: 958 FNEGEGDLFLISLKAGGTGLNLT-GADTVILYDLWWNPAVEQQ-----AADRAYRMGQKN 1011 Query: 164 AVFVYYLIAQNTIDE 178 V V L+A TI+E Sbjct: 1012 TVQVIKLVAHGTIEE 1026 >gi|1765914|emb|CAA71278.1| RAD54 [Drosophila melanogaster] Length = 784 Score = 40.8 bits (94), Expect = 0.12, Method: Compositional matrix adjust. Identities = 23/77 (29%), Positives = 40/77 (51%), Gaps = 6/77 (7%) Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 G GLNL G N L F W+ +Q + R+ + G K+ ++Y L+A +I+E Sbjct: 580 GCGLNL-IGANRLFMFDPDWNPANDEQAMARVW-----RDGQKKPCYIYRLVASGSIEEK 633 Query: 180 VLQRLRTKSTIQDLLLN 196 +LQR K ++ +++ Sbjct: 634 ILQRQTHKKSLSSTIID 650 >gi|323337858|gb|EGA79098.1| Chd1p [Saccharomyces cerevisiae Vin13] Length = 1329 Score = 40.8 bits (94), Expect = 0.12, Method: Compositional matrix adjust. Identities = 23/74 (31%), Positives = 39/74 (52%), Gaps = 6/74 (8%) Query: 118 SCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 + G G+NL +++F S W + Q M R + G K V VY L++++T++ Sbjct: 773 AGGLGINLMTADTVVIFDSDWNPQADLQAM------ARAHRIGQKNHVMVYRLVSKDTVE 826 Query: 178 ELVLQRLRTKSTIQ 191 E VL+R R K ++ Sbjct: 827 EEVLERARKKMILE 840 >gi|297833338|ref|XP_002884551.1| predicted protein [Arabidopsis lyrata subsp. lyrata] gi|297330391|gb|EFH60810.1| predicted protein [Arabidopsis lyrata subsp. lyrata] Length = 1130 Score = 40.8 bits (94), Expect = 0.12, Method: Compositional matrix adjust. Identities = 28/105 (26%), Positives = 54/105 (51%), Gaps = 8/105 (7%) Query: 95 DKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIG 152 D+ ++++NE P + + G GLNLQ +++F S W + QM ++ Sbjct: 795 DQRGLLLKQFNEPDSPYFMFLLSTRAGGLGLNLQTADTVIIFDSDW-----NPQMDQQ-A 848 Query: 153 VTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 R + G K+ V V+ L++ +I+E++L+R + K I ++ A Sbjct: 849 EDRAHRIGQKKEVRVFVLVSVGSIEEVILERAKQKMGIDAKVIQA 893 >gi|262374572|ref|ZP_06067846.1| predicted protein [Acinetobacter junii SH205] gi|262310568|gb|EEY91658.1| predicted protein [Acinetobacter junii SH205] Length = 1115 Score = 40.8 bits (94), Expect = 0.12, Method: Compositional matrix adjust. Identities = 27/107 (25%), Positives = 50/107 (46%), Gaps = 7/107 (6%) Query: 91 GRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 G+T +D I + G++P+ + G GLNL + ++ + WW+ Q +R Sbjct: 996 GKTKKRDEV-ITAFQSGQVPVFLISLKAGGVGLNLT-AADTVIHYDPWWNPAAEDQASDR 1053 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + G + VFVY LI +I+E +L + K+ + +L+ Sbjct: 1054 AW-----RIGQDKPVFVYKLITNKSIEEKILALQQNKAELAQSILST 1095 >gi|229029537|ref|ZP_04185617.1| Helicase, SWF/SNF [Bacillus cereus AH1271] gi|228731736|gb|EEL82638.1| Helicase, SWF/SNF [Bacillus cereus AH1271] Length = 1064 Score = 40.8 bits (94), Expect = 0.12, Method: Compositional matrix adjust. Identities = 25/75 (33%), Positives = 36/75 (48%), Gaps = 6/75 (8%) Query: 104 WNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKR 163 +NEG+ L + G GLNL G + ++ + LWW+ QQ R + G K Sbjct: 958 FNEGEGDLFLISLKAGGTGLNLT-GADTVILYDLWWNPAVEQQ-----AADRAYRMGQKN 1011 Query: 164 AVFVYYLIAQNTIDE 178 V V L+A TI+E Sbjct: 1012 TVQVIKLVAHGTIEE 1026 >gi|194855241|ref|XP_001968502.1| GG24469 [Drosophila erecta] gi|292630862|sp|B3NAN8|RAD54_DROER RecName: Full=DNA repair and recombination protein RAD54-like; AltName: Full=Protein okra gi|190660369|gb|EDV57561.1| GG24469 [Drosophila erecta] Length = 784 Score = 40.8 bits (94), Expect = 0.12, Method: Compositional matrix adjust. Identities = 23/77 (29%), Positives = 40/77 (51%), Gaps = 6/77 (7%) Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 G GLNL G N L F W+ +Q + R+ + G K+ ++Y L+A +I+E Sbjct: 580 GCGLNL-IGANRLFMFDPDWNPANDEQAMARVW-----RDGQKKPCYIYRLVASGSIEEK 633 Query: 180 VLQRLRTKSTIQDLLLN 196 +LQR K ++ +++ Sbjct: 634 ILQRQTHKKSLSSTIID 650 >gi|66356826|ref|XP_625591.1| Swi/SNf2 RAD26 [Cryptosporidium parvum Iowa II] gi|46226589|gb|EAK87577.1| Swi/SNf2 RAD26 [Cryptosporidium parvum Iowa II] Length = 1181 Score = 40.8 bits (94), Expect = 0.12, Method: Composition-based stats. Identities = 30/103 (29%), Positives = 50/103 (48%), Gaps = 7/103 (6%) Query: 101 IQEWNEGKIPLLFAHPASCGH-GLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQA 159 ++ +N+ + LF + G GLN+ G N ++ + WW+ Q ER + Sbjct: 783 VKRFNQNQSIFLFILTSRVGGVGLNIT-GANRVILYDPWWNPMTDVQAKERCW-----RI 836 Query: 160 GFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKET 202 G K+ V VY LI ++TI+E + QR K I +L K ++ Sbjct: 837 GQKKEVIVYRLITRDTIEEKIFQRQLFKEFIAKQILKDPKSQS 879 >gi|328861599|gb|EGG10702.1| hypothetical protein MELLADRAFT_22404 [Melampsora larici-populina 98AG31] Length = 1154 Score = 40.8 bits (94), Expect = 0.12, Method: Compositional matrix adjust. Identities = 23/81 (28%), Positives = 43/81 (53%), Gaps = 6/81 (7%) Query: 118 SCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 + G G+NL+ +++F S W + Q M R + G K V VY L+ ++T++ Sbjct: 545 AGGLGINLETADTVIIFDSDWNPQNDLQAM------ARAHRIGQKNHVNVYRLVTKDTVE 598 Query: 178 ELVLQRLRTKSTIQDLLLNAL 198 E VL+R + K ++ ++N + Sbjct: 599 EDVLERAKRKMILEYAIINQM 619 >gi|297834836|ref|XP_002885300.1| hypothetical protein ARALYDRAFT_479436 [Arabidopsis lyrata subsp. lyrata] gi|297331140|gb|EFH61559.1| hypothetical protein ARALYDRAFT_479436 [Arabidopsis lyrata subsp. lyrata] Length = 910 Score = 40.8 bits (94), Expect = 0.12, Method: Compositional matrix adjust. Identities = 26/75 (34%), Positives = 39/75 (52%), Gaps = 6/75 (8%) Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 G GLNL G N LV F W+ +Q R+ + G K+ V+VY ++ TI+E Sbjct: 615 GCGLNL-IGANRLVLFDPDWNPANDKQAAARVW-----RDGQKKRVYVYRFLSTGTIEEK 668 Query: 180 VLQRLRTKSTIQDLL 194 V QR +K +Q ++ Sbjct: 669 VYQRQMSKEGLQKVI 683 >gi|294055867|ref|YP_003549525.1| SNF2-related protein [Coraliomargarita akajimensis DSM 45221] gi|293615200|gb|ADE55355.1| SNF2-related protein [Coraliomargarita akajimensis DSM 45221] Length = 843 Score = 40.8 bits (94), Expect = 0.12, Method: Compositional matrix adjust. Identities = 37/144 (25%), Positives = 64/144 (44%), Gaps = 19/144 (13%) Query: 59 LEVIIEKANAAPIIVAYHFNSDLARLQK----AFPQ-------GRTLDKD-PCTIQEWNE 106 LE +E A A +++ F L RL+ FP+ G+T D+ P + + Sbjct: 676 LEEALEGAGARKVVIFSQFVQLLTRLKPEIKAKFPKVALLELTGQTRDRSKPVETFQNKD 735 Query: 107 GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVF 166 G +L + A G G+ L + + + WW+ Q ++R+ + G ++ VF Sbjct: 736 GPAVILVSLRAG-GTGITL-HAADYVFLLDPWWNPAVENQAVDRV-----HRIGQQKRVF 788 Query: 167 VYYLIAQNTIDELVLQRLRTKSTI 190 VY +I Q TI+E + R K + Sbjct: 789 VYRMITQGTIEERIQHLKREKREL 812 >gi|291239296|ref|XP_002739559.1| PREDICTED: Lodestar protein-like [Saccoglossus kowalevskii] Length = 1134 Score = 40.8 bits (94), Expect = 0.12, Method: Compositional matrix adjust. Identities = 23/78 (29%), Positives = 42/78 (53%), Gaps = 6/78 (7%) Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 G GLNL GGN L + W+ QQ +RI + G ++ VF++ + +NT++E Sbjct: 1044 GVGLNL-IGGNHLFLLDMHWNPALEQQACDRI-----YRVGQEKEVFIHKFVCKNTVEEK 1097 Query: 180 VLQRLRTKSTIQDLLLNA 197 +L+ + K+ + +L+ Sbjct: 1098 ILELQKKKTNLATNVLSG 1115 >gi|89902690|ref|YP_525161.1| SNF2-like protein [Rhodoferax ferrireducens T118] gi|89347427|gb|ABD71630.1| SNF2-related [Rhodoferax ferrireducens T118] Length = 1178 Score = 40.8 bits (94), Expect = 0.12, Method: Composition-based stats. Identities = 26/102 (25%), Positives = 50/102 (49%), Gaps = 7/102 (6%) Query: 91 GRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 G++ +D I+++ G +PL + G GLNL + ++ + WW+ +E Sbjct: 1056 GQSQKRD-ALIEQFTSGAVPLFLISLKAGGVGLNLPQA-DTVIHYDPWWN-----PAVEN 1108 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQD 192 R + G ++V+V L+AQ TI+E +L K+ + + Sbjct: 1109 QATDRAHRIGQTQSVWVVKLVAQGTIEERILGLQERKAALAE 1150 >gi|301053386|ref|YP_003791597.1| helicase, SWF/SNF family [Bacillus anthracis CI] gi|300375555|gb|ADK04459.1| helicase, SWF/SNF family [Bacillus cereus biovar anthracis str. CI] Length = 1064 Score = 40.8 bits (94), Expect = 0.12, Method: Compositional matrix adjust. Identities = 25/75 (33%), Positives = 36/75 (48%), Gaps = 6/75 (8%) Query: 104 WNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKR 163 +NEG+ L + G GLNL G + ++ + LWW+ QQ R + G K Sbjct: 958 FNEGEGDLFLISLKAGGTGLNLT-GADTVILYDLWWNPAVEQQ-----AADRAYRMGQKN 1011 Query: 164 AVFVYYLIAQNTIDE 178 V V L+A TI+E Sbjct: 1012 TVQVIKLVAHGTIEE 1026 >gi|27819922|gb|AAL39744.2| LD35220p [Drosophila melanogaster] Length = 788 Score = 40.8 bits (94), Expect = 0.12, Method: Compositional matrix adjust. Identities = 23/77 (29%), Positives = 40/77 (51%), Gaps = 6/77 (7%) Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 G GLNL G N L F W+ +Q + R+ + G K+ ++Y L+A +I+E Sbjct: 584 GCGLNL-IGANRLFMFDPDWNPANDEQAMARVW-----RDGQKKPCYIYRLVASGSIEEK 637 Query: 180 VLQRLRTKSTIQDLLLN 196 +LQR K ++ +++ Sbjct: 638 ILQRQTHKKSLSSTIID 654 >gi|326779993|ref|ZP_08239258.1| SNF2-related protein [Streptomyces cf. griseus XylebKG-1] gi|326660326|gb|EGE45172.1| SNF2-related protein [Streptomyces cf. griseus XylebKG-1] Length = 1001 Score = 40.8 bits (94), Expect = 0.12, Method: Composition-based stats. Identities = 22/97 (22%), Positives = 46/97 (47%), Gaps = 6/97 (6%) Query: 101 IQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 + + ++P+ + G GLNL ++ V F WW+ +E R + G Sbjct: 888 VDRFQSAEVPVFLLSLKAAGTGLNLTRAAHV-VHFDRWWN-----PAVEEQATDRAYRIG 941 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + V V+ +IA+ T+++ + + L +K + D +L + Sbjct: 942 QTQPVQVHRIIAEGTVEDRIAELLESKRVLADAVLGS 978 >gi|225863710|ref|YP_002749088.1| putative helicase [Bacillus cereus 03BB102] gi|225786052|gb|ACO26269.1| putative helicase [Bacillus cereus 03BB102] Length = 1064 Score = 40.8 bits (94), Expect = 0.12, Method: Compositional matrix adjust. Identities = 25/75 (33%), Positives = 36/75 (48%), Gaps = 6/75 (8%) Query: 104 WNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKR 163 +NEG+ L + G GLNL G + ++ + LWW+ QQ R + G K Sbjct: 958 FNEGEGDLFLISLKAGGTGLNLT-GADTVILYDLWWNPAVEQQ-----AADRAYRMGQKN 1011 Query: 164 AVFVYYLIAQNTIDE 178 V V L+A TI+E Sbjct: 1012 TVQVIKLVAHGTIEE 1026 >gi|182439336|ref|YP_001827055.1| SNF2/RAD54 family helicase [Streptomyces griseus subsp. griseus NBRC 13350] gi|178467852|dbj|BAG22372.1| putative SNF2/RAD54 family helicase [Streptomyces griseus subsp. griseus NBRC 13350] Length = 1004 Score = 40.8 bits (94), Expect = 0.12, Method: Composition-based stats. Identities = 22/97 (22%), Positives = 46/97 (47%), Gaps = 6/97 (6%) Query: 101 IQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 + + ++P+ + G GLNL ++ V F WW+ +E R + G Sbjct: 891 VDRFQSAEVPVFLLSLKAAGTGLNLTRAAHV-VHFDRWWN-----PAVEEQATDRAYRIG 944 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + V V+ +IA+ T+++ + + L +K + D +L + Sbjct: 945 QTQPVQVHRIIAEGTVEDRIAELLESKRVLADAVLGS 981 >gi|229172496|ref|ZP_04300055.1| Helicase, SWF/SNF [Bacillus cereus MM3] gi|228610967|gb|EEK68230.1| Helicase, SWF/SNF [Bacillus cereus MM3] Length = 1064 Score = 40.8 bits (94), Expect = 0.12, Method: Compositional matrix adjust. Identities = 25/75 (33%), Positives = 36/75 (48%), Gaps = 6/75 (8%) Query: 104 WNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKR 163 +NEG+ L + G GLNL G + ++ + LWW+ QQ R + G K Sbjct: 958 FNEGEGDLFLISLKAGGTGLNLT-GADTVILYDLWWNPAVEQQ-----AADRAYRMGQKN 1011 Query: 164 AVFVYYLIAQNTIDE 178 V V L+A TI+E Sbjct: 1012 TVQVIKLVAHGTIEE 1026 >gi|167521471|ref|XP_001745074.1| hypothetical protein [Monosiga brevicollis MX1] gi|163776688|gb|EDQ90307.1| predicted protein [Monosiga brevicollis MX1] Length = 827 Score = 40.8 bits (94), Expect = 0.12, Method: Compositional matrix adjust. Identities = 26/71 (36%), Positives = 36/71 (50%), Gaps = 6/71 (8%) Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 G GLN+ G + LV F W+ Q + RI + G R VF+Y L+A TI+E Sbjct: 634 GVGLNI-VGASRLVLFDTDWNPSHDLQAMARIW-----REGQTRPVFIYRLVATGTIEEK 687 Query: 180 VLQRLRTKSTI 190 + QR KS + Sbjct: 688 IYQRQIVKSAL 698 >gi|228984941|ref|ZP_04145110.1| Helicase, SWF/SNF [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] gi|228774764|gb|EEM23161.1| Helicase, SWF/SNF [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] Length = 1064 Score = 40.8 bits (94), Expect = 0.12, Method: Compositional matrix adjust. Identities = 25/75 (33%), Positives = 36/75 (48%), Gaps = 6/75 (8%) Query: 104 WNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKR 163 +NEG+ L + G GLNL G + ++ + LWW+ QQ R + G K Sbjct: 958 FNEGEGDLFLISLKAGGTGLNLT-GADTVILYDLWWNPAVEQQ-----AADRAYRMGQKN 1011 Query: 164 AVFVYYLIAQNTIDE 178 V V L+A TI+E Sbjct: 1012 TVQVIKLVAHGTIEE 1026 >gi|218902968|ref|YP_002450802.1| putative helicase [Bacillus cereus AH820] gi|228930936|ref|ZP_04093897.1| Helicase, SWF/SNF [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] gi|229121402|ref|ZP_04250630.1| Helicase, SWF/SNF [Bacillus cereus 95/8201] gi|218535984|gb|ACK88382.1| putative helicase [Bacillus cereus AH820] gi|228662045|gb|EEL17657.1| Helicase, SWF/SNF [Bacillus cereus 95/8201] gi|228828715|gb|EEM74390.1| Helicase, SWF/SNF [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] Length = 1064 Score = 40.8 bits (94), Expect = 0.12, Method: Compositional matrix adjust. Identities = 25/75 (33%), Positives = 36/75 (48%), Gaps = 6/75 (8%) Query: 104 WNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKR 163 +NEG+ L + G GLNL G + ++ + LWW+ QQ R + G K Sbjct: 958 FNEGEGDLFLISLKAGGTGLNLT-GADTVILYDLWWNPAVEQQ-----AADRAYRMGQKN 1011 Query: 164 AVFVYYLIAQNTIDE 178 V V L+A TI+E Sbjct: 1012 TVQVIKLVAHGTIEE 1026 >gi|217959332|ref|YP_002337880.1| putative helicase [Bacillus cereus AH187] gi|229138547|ref|ZP_04267132.1| Helicase, SWF/SNF [Bacillus cereus BDRD-ST26] gi|217067719|gb|ACJ81969.1| putative helicase [Bacillus cereus AH187] gi|228644907|gb|EEL01154.1| Helicase, SWF/SNF [Bacillus cereus BDRD-ST26] Length = 1064 Score = 40.8 bits (94), Expect = 0.12, Method: Compositional matrix adjust. Identities = 25/75 (33%), Positives = 36/75 (48%), Gaps = 6/75 (8%) Query: 104 WNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKR 163 +NEG+ L + G GLNL G + ++ + LWW+ QQ R + G K Sbjct: 958 FNEGEGDLFLISLKAGGTGLNLT-GADTVILYDLWWNPAVEQQ-----AADRAYRMGQKN 1011 Query: 164 AVFVYYLIAQNTIDE 178 V V L+A TI+E Sbjct: 1012 TVQVIKLVAHGTIEE 1026 >gi|325116690|emb|CBZ52243.1| hypothetical protein NCLIV_020290 [Neospora caninum Liverpool] Length = 677 Score = 40.8 bits (94), Expect = 0.12, Method: Compositional matrix adjust. Identities = 26/71 (36%), Positives = 36/71 (50%), Gaps = 6/71 (8%) Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 G GLNL G N L+ W+ QQ + RI + G VF+Y L+ TI+E Sbjct: 601 GVGLNL-IGANRLILLDPDWNPANDQQALARI-----WRPGQVNPVFIYRLVGARTIEEK 654 Query: 180 VLQRLRTKSTI 190 +LQR K+T+ Sbjct: 655 ILQRQAYKTTL 665 >gi|237756840|ref|ZP_04585323.1| helicase SWR1 [Sulfurihydrogenibium yellowstonense SS-5] gi|237691004|gb|EEP60129.1| helicase SWR1 [Sulfurihydrogenibium yellowstonense SS-5] Length = 383 Score = 40.8 bits (94), Expect = 0.12, Method: Compositional matrix adjust. Identities = 35/138 (25%), Positives = 62/138 (44%), Gaps = 22/138 (15%) Query: 53 DEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLL 112 D+ IK L+ I++ IV+YH L +K + ++ + C + Sbjct: 237 DKIIKNLKTILQPQQ----IVSYH--GSLKPEEKNLAVKKFVEDEKCLV----------F 280 Query: 113 FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIA 172 + G GL L + ++FF L W+ + Q +R+ + G K V +Y I Sbjct: 281 VGTINAAGEGLTLT-SSSYVIFFDLHWNPAKMWQAEDRV-----HRIGQKNKVNIYTFIT 334 Query: 173 QNTIDELVLQRLRTKSTI 190 QNT++E +LQ+L K ++ Sbjct: 335 QNTVEEKILQKLEEKRSM 352 >gi|228933137|ref|ZP_04095994.1| Helicase, SWF/SNF [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1] gi|228826494|gb|EEM72270.1| Helicase, SWF/SNF [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1] Length = 1064 Score = 40.8 bits (94), Expect = 0.12, Method: Compositional matrix adjust. Identities = 25/75 (33%), Positives = 36/75 (48%), Gaps = 6/75 (8%) Query: 104 WNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKR 163 +NEG+ L + G GLNL G + ++ + LWW+ QQ R + G K Sbjct: 958 FNEGEGDLFLISLKAGGTGLNLT-GADTVILYDLWWNPAVEQQ-----AADRAYRMGQKN 1011 Query: 164 AVFVYYLIAQNTIDE 178 V V L+A TI+E Sbjct: 1012 TVQVIKLVAHGTIEE 1026 >gi|228952232|ref|ZP_04114322.1| Helicase, SWF/SNF [Bacillus thuringiensis serovar kurstaki str. T03a001] gi|228807447|gb|EEM53976.1| Helicase, SWF/SNF [Bacillus thuringiensis serovar kurstaki str. T03a001] Length = 1064 Score = 40.8 bits (94), Expect = 0.12, Method: Compositional matrix adjust. Identities = 25/75 (33%), Positives = 36/75 (48%), Gaps = 6/75 (8%) Query: 104 WNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKR 163 +NEG+ L + G GLNL G + ++ + LWW+ QQ R + G K Sbjct: 958 FNEGEGDLFLISLKAGGTGLNLT-GADTVILYDLWWNPAVEQQ-----AADRAYRMGQKN 1011 Query: 164 AVFVYYLIAQNTIDE 178 V V L+A TI+E Sbjct: 1012 TVQVIKLVAHGTIEE 1026 >gi|229090820|ref|ZP_04222049.1| Helicase, SWF/SNF [Bacillus cereus Rock3-42] gi|228692523|gb|EEL46253.1| Helicase, SWF/SNF [Bacillus cereus Rock3-42] Length = 1064 Score = 40.8 bits (94), Expect = 0.12, Method: Compositional matrix adjust. Identities = 25/75 (33%), Positives = 36/75 (48%), Gaps = 6/75 (8%) Query: 104 WNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKR 163 +NEG+ L + G GLNL G + ++ + LWW+ QQ R + G K Sbjct: 958 FNEGEGDLFLISLKAGGTGLNLT-GADTVILYDLWWNPAVEQQ-----AADRAYRMGQKN 1011 Query: 164 AVFVYYLIAQNTIDE 178 V V L+A TI+E Sbjct: 1012 TVQVIKLVAHGTIEE 1026 >gi|196045190|ref|ZP_03112423.1| putative helicase [Bacillus cereus 03BB108] gi|229184042|ref|ZP_04311255.1| Helicase, SWF/SNF [Bacillus cereus BGSC 6E1] gi|196024192|gb|EDX62866.1| putative helicase [Bacillus cereus 03BB108] gi|228599425|gb|EEK57032.1| Helicase, SWF/SNF [Bacillus cereus BGSC 6E1] Length = 1064 Score = 40.8 bits (94), Expect = 0.12, Method: Compositional matrix adjust. Identities = 25/75 (33%), Positives = 36/75 (48%), Gaps = 6/75 (8%) Query: 104 WNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKR 163 +NEG+ L + G GLNL G + ++ + LWW+ QQ R + G K Sbjct: 958 FNEGEGDLFLISLKAGGTGLNLT-GADTVILYDLWWNPAVEQQ-----AADRAYRMGQKN 1011 Query: 164 AVFVYYLIAQNTIDE 178 V V L+A TI+E Sbjct: 1012 TVQVIKLVAHGTIEE 1026 >gi|206975015|ref|ZP_03235930.1| putative helicase [Bacillus cereus H3081.97] gi|206747034|gb|EDZ58426.1| putative helicase [Bacillus cereus H3081.97] Length = 1064 Score = 40.8 bits (94), Expect = 0.12, Method: Compositional matrix adjust. Identities = 25/75 (33%), Positives = 36/75 (48%), Gaps = 6/75 (8%) Query: 104 WNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKR 163 +NEG+ L + G GLNL G + ++ + LWW+ QQ R + G K Sbjct: 958 FNEGEGDLFLISLKAGGTGLNLT-GADTVILYDLWWNPAVEQQ-----AADRAYRMGQKN 1011 Query: 164 AVFVYYLIAQNTIDE 178 V V L+A TI+E Sbjct: 1012 TVQVIKLVAHGTIEE 1026 >gi|118477275|ref|YP_894426.1| SWF/SNF family helicase [Bacillus thuringiensis str. Al Hakam] gi|118416500|gb|ABK84919.1| helicase, SWF/SNF family [Bacillus thuringiensis str. Al Hakam] Length = 1064 Score = 40.8 bits (94), Expect = 0.12, Method: Compositional matrix adjust. Identities = 25/75 (33%), Positives = 36/75 (48%), Gaps = 6/75 (8%) Query: 104 WNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKR 163 +NEG+ L + G GLNL G + ++ + LWW+ QQ R + G K Sbjct: 958 FNEGEGDLFLISLKAGGTGLNLT-GADTVILYDLWWNPAVEQQ-----AADRAYRMGQKN 1011 Query: 164 AVFVYYLIAQNTIDE 178 V V L+A TI+E Sbjct: 1012 TVQVIKLVAHGTIEE 1026 >gi|30261851|ref|NP_844228.1| helicase, putative [Bacillus anthracis str. Ames] gi|47527092|ref|YP_018441.1| helicase [Bacillus anthracis str. 'Ames Ancestor'] gi|49184685|ref|YP_027937.1| helicase [Bacillus anthracis str. Sterne] gi|165869343|ref|ZP_02214002.1| putative helicase [Bacillus anthracis str. A0488] gi|167633415|ref|ZP_02391740.1| putative helicase [Bacillus anthracis str. A0442] gi|167638796|ref|ZP_02397071.1| putative helicase [Bacillus anthracis str. A0193] gi|170686032|ref|ZP_02877254.1| putative helicase [Bacillus anthracis str. A0465] gi|170707256|ref|ZP_02897711.1| putative helicase [Bacillus anthracis str. A0389] gi|177650600|ref|ZP_02933567.1| putative helicase [Bacillus anthracis str. A0174] gi|190566481|ref|ZP_03019399.1| putative helicase [Bacillus anthracis Tsiankovskii-I] gi|227815374|ref|YP_002815383.1| putative helicase [Bacillus anthracis str. CDC 684] gi|229599991|ref|YP_002866233.1| putative helicase [Bacillus anthracis str. A0248] gi|254683351|ref|ZP_05147212.1| putative helicase [Bacillus anthracis str. CNEVA-9066] gi|254734706|ref|ZP_05192418.1| putative helicase [Bacillus anthracis str. Western North America USA6153] gi|254741114|ref|ZP_05198802.1| putative helicase [Bacillus anthracis str. Kruger B] gi|254755357|ref|ZP_05207391.1| putative helicase [Bacillus anthracis str. Vollum] gi|254759895|ref|ZP_05211919.1| putative helicase [Bacillus anthracis str. Australia 94] gi|30256079|gb|AAP25714.1| putative helicase [Bacillus anthracis str. Ames] gi|47502240|gb|AAT30916.1| putative helicase [Bacillus anthracis str. 'Ames Ancestor'] gi|49178612|gb|AAT53988.1| helicase, putative [Bacillus anthracis str. Sterne] gi|164714783|gb|EDR20301.1| putative helicase [Bacillus anthracis str. A0488] gi|167513260|gb|EDR88631.1| putative helicase [Bacillus anthracis str. A0193] gi|167531453|gb|EDR94131.1| putative helicase [Bacillus anthracis str. A0442] gi|170127755|gb|EDS96627.1| putative helicase [Bacillus anthracis str. A0389] gi|170669729|gb|EDT20470.1| putative helicase [Bacillus anthracis str. A0465] gi|172083744|gb|EDT68804.1| putative helicase [Bacillus anthracis str. A0174] gi|190562616|gb|EDV16583.1| putative helicase [Bacillus anthracis Tsiankovskii-I] gi|227003172|gb|ACP12915.1| putative helicase [Bacillus anthracis str. CDC 684] gi|229264399|gb|ACQ46036.1| putative helicase [Bacillus anthracis str. A0248] Length = 1064 Score = 40.8 bits (94), Expect = 0.12, Method: Compositional matrix adjust. Identities = 25/75 (33%), Positives = 36/75 (48%), Gaps = 6/75 (8%) Query: 104 WNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKR 163 +NEG+ L + G GLNL G + ++ + LWW+ QQ R + G K Sbjct: 958 FNEGEGDLFLISLKAGGTGLNLT-GADTVILYDLWWNPAVEQQ-----AADRAYRMGQKN 1011 Query: 164 AVFVYYLIAQNTIDE 178 V V L+A TI+E Sbjct: 1012 TVQVIKLVAHGTIEE 1026 >gi|296502447|ref|YP_003664147.1| SWF/SNF family helicase [Bacillus thuringiensis BMB171] gi|296323499|gb|ADH06427.1| SWF/SNF family helicase [Bacillus thuringiensis BMB171] Length = 1064 Score = 40.8 bits (94), Expect = 0.12, Method: Compositional matrix adjust. Identities = 25/75 (33%), Positives = 36/75 (48%), Gaps = 6/75 (8%) Query: 104 WNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKR 163 +NEG+ L + G GLNL G + ++ + LWW+ QQ R + G K Sbjct: 958 FNEGEGDLFLISLKAGGTGLNLT-GADTVILYDLWWNPAVEQQ-----AADRAYRMGQKN 1011 Query: 164 AVFVYYLIAQNTIDE 178 V V L+A TI+E Sbjct: 1012 TVQVIKLVAHGTIEE 1026 >gi|228945457|ref|ZP_04107809.1| Helicase, SWF/SNF [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] gi|228814210|gb|EEM60479.1| Helicase, SWF/SNF [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] Length = 1064 Score = 40.8 bits (94), Expect = 0.12, Method: Compositional matrix adjust. Identities = 25/75 (33%), Positives = 36/75 (48%), Gaps = 6/75 (8%) Query: 104 WNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKR 163 +NEG+ L + G GLNL G + ++ + LWW+ QQ R + G K Sbjct: 958 FNEGEGDLFLISLKAGGTGLNLT-GADTVILYDLWWNPAVEQQ-----AADRAYRMGQKN 1011 Query: 164 AVFVYYLIAQNTIDE 178 V V L+A TI+E Sbjct: 1012 TVQVIKLVAHGTIEE 1026 >gi|196041238|ref|ZP_03108533.1| putative helicase [Bacillus cereus NVH0597-99] gi|196027946|gb|EDX66558.1| putative helicase [Bacillus cereus NVH0597-99] Length = 1064 Score = 40.8 bits (94), Expect = 0.12, Method: Compositional matrix adjust. Identities = 25/75 (33%), Positives = 36/75 (48%), Gaps = 6/75 (8%) Query: 104 WNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKR 163 +NEG+ L + G GLNL G + ++ + LWW+ QQ R + G K Sbjct: 958 FNEGEGDLFLISLKAGGTGLNLT-GADTVILYDLWWNPAVEQQ-----AADRAYRMGQKN 1011 Query: 164 AVFVYYLIAQNTIDE 178 V V L+A TI+E Sbjct: 1012 TVQVIKLVAHGTIEE 1026 >gi|121712768|ref|XP_001273995.1| SNF2 family helicase, putative [Aspergillus clavatus NRRL 1] gi|119402148|gb|EAW12569.1| SNF2 family helicase, putative [Aspergillus clavatus NRRL 1] Length = 953 Score = 40.8 bits (94), Expect = 0.12, Method: Compositional matrix adjust. Identities = 30/110 (27%), Positives = 52/110 (47%), Gaps = 9/110 (8%) Query: 96 KDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTR 155 +D T + N+ +L A + C GLNL N + WW Q ++R+ Sbjct: 838 RDSSTYKFSNDPGCKVLLASLSVCSVGLNL-VAANQAILADSWWAPTIEDQAVDRV---- 892 Query: 156 QRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIHV 205 + G KR V+ L+ +NTI++ VL+ + T + L+L A ++ + V Sbjct: 893 -YRLGQKRETTVWRLVMENTIEDRVLE---IQDTKRKLMLAAFRETSKKV 938 >gi|49481102|ref|YP_035985.1| SWF/SNF family helicase [Bacillus thuringiensis serovar konkukian str. 97-27] gi|49332658|gb|AAT63304.1| helicase, SWF/SNF family [Bacillus thuringiensis serovar konkukian str. 97-27] Length = 1064 Score = 40.8 bits (94), Expect = 0.12, Method: Compositional matrix adjust. Identities = 25/75 (33%), Positives = 36/75 (48%), Gaps = 6/75 (8%) Query: 104 WNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKR 163 +NEG+ L + G GLNL G + ++ + LWW+ QQ R + G K Sbjct: 958 FNEGEGDLFLISLKAGGTGLNLT-GADTVILYDLWWNPAVEQQ-----AADRAYRMGQKN 1011 Query: 164 AVFVYYLIAQNTIDE 178 V V L+A TI+E Sbjct: 1012 TVQVIKLVAHGTIEE 1026 >gi|163939654|ref|YP_001644538.1| non-specific serine/threonine protein kinase [Bacillus weihenstephanensis KBAB4] gi|163861851|gb|ABY42910.1| Non-specific serine/threonine protein kinase [Bacillus weihenstephanensis KBAB4] Length = 1068 Score = 40.8 bits (94), Expect = 0.12, Method: Compositional matrix adjust. Identities = 25/75 (33%), Positives = 36/75 (48%), Gaps = 6/75 (8%) Query: 104 WNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKR 163 +NEG+ L + G GLNL G + ++ + LWW+ QQ R + G K Sbjct: 962 FNEGEGDLFLISLKAGGTGLNLT-GADTVILYDLWWNPAVEQQ-----AADRAYRMGQKN 1015 Query: 164 AVFVYYLIAQNTIDE 178 V V L+A TI+E Sbjct: 1016 TVQVIKLVAHGTIEE 1030 >gi|324325873|gb|ADY21133.1| helicase, putative [Bacillus thuringiensis serovar finitimus YBT-020] Length = 1064 Score = 40.8 bits (94), Expect = 0.12, Method: Compositional matrix adjust. Identities = 25/75 (33%), Positives = 36/75 (48%), Gaps = 6/75 (8%) Query: 104 WNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKR 163 +NEG+ L + G GLNL G + ++ + LWW+ QQ R + G K Sbjct: 958 FNEGEGDLFLISLKAGGTGLNLT-GADTVILYDLWWNPAVEQQ-----AADRAYRMGQKN 1011 Query: 164 AVFVYYLIAQNTIDE 178 V V L+A TI+E Sbjct: 1012 TVQVIKLVAHGTIEE 1026 >gi|254723933|ref|ZP_05185719.1| putative helicase [Bacillus anthracis str. A1055] Length = 1064 Score = 40.8 bits (94), Expect = 0.12, Method: Compositional matrix adjust. Identities = 25/75 (33%), Positives = 36/75 (48%), Gaps = 6/75 (8%) Query: 104 WNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKR 163 +NEG+ L + G GLNL G + ++ + LWW+ QQ R + G K Sbjct: 958 FNEGEGDLFLISLKAGGTGLNLT-GADTVILYDLWWNPAVEQQ-----AADRAYRMGQKN 1011 Query: 164 AVFVYYLIAQNTIDE 178 V V L+A TI+E Sbjct: 1012 TVQVIKLVAHGTIEE 1026 >gi|229132678|ref|ZP_04261525.1| Helicase, SWF/SNF [Bacillus cereus BDRD-ST196] gi|228650805|gb|EEL06793.1| Helicase, SWF/SNF [Bacillus cereus BDRD-ST196] Length = 1068 Score = 40.8 bits (94), Expect = 0.12, Method: Compositional matrix adjust. Identities = 25/75 (33%), Positives = 36/75 (48%), Gaps = 6/75 (8%) Query: 104 WNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKR 163 +NEG+ L + G GLNL G + ++ + LWW+ QQ R + G K Sbjct: 962 FNEGEGDLFLISLKAGGTGLNLT-GADTVILYDLWWNPAVEQQ-----AADRAYRMGQKN 1015 Query: 164 AVFVYYLIAQNTIDE 178 V V L+A TI+E Sbjct: 1016 TVQVIKLVAHGTIEE 1030 >gi|229155427|ref|ZP_04283536.1| Helicase, SWF/SNF [Bacillus cereus ATCC 4342] gi|228627988|gb|EEK84706.1| Helicase, SWF/SNF [Bacillus cereus ATCC 4342] Length = 1064 Score = 40.8 bits (94), Expect = 0.12, Method: Compositional matrix adjust. Identities = 25/75 (33%), Positives = 36/75 (48%), Gaps = 6/75 (8%) Query: 104 WNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKR 163 +NEG+ L + G GLNL G + ++ + LWW+ QQ R + G K Sbjct: 958 FNEGEGDLFLISLKAGGTGLNLT-GADTVILYDLWWNPAVEQQ-----AADRAYRMGQKN 1011 Query: 164 AVFVYYLIAQNTIDE 178 V V L+A TI+E Sbjct: 1012 TVQVIKLVAHGTIEE 1026 >gi|327481349|gb|AEA84659.1| helicase/SNF2 domain-containing protein [Pseudomonas stutzeri DSM 4166] Length = 773 Score = 40.8 bits (94), Expect = 0.13, Method: Composition-based stats. Identities = 29/119 (24%), Positives = 55/119 (46%), Gaps = 16/119 (13%) Query: 71 IIVAYHFNSDLARLQKAFPQ---------GRTLDKDPCTIQEWNEGKIPLLFAHPASCGH 121 +++ F S LA +++A + G T D+ ++ + G++PL + G Sbjct: 624 VLLFSQFTSMLALIEQALLKRGITYVKLTGETDDRR-TPVERFQAGEVPLFLISLKAGGT 682 Query: 122 GLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELV 180 GLNL + ++ + WW+ Q + R + G + VFVY LI + T++E + Sbjct: 683 GLNLT-AADTVIHYDPWWNPAAENQATD-----RAYRIGQDKPVFVYRLITRGTVEERI 735 >gi|229079035|ref|ZP_04211586.1| Helicase, SWF/SNF [Bacillus cereus Rock4-2] gi|228704209|gb|EEL56644.1| Helicase, SWF/SNF [Bacillus cereus Rock4-2] Length = 1064 Score = 40.8 bits (94), Expect = 0.13, Method: Compositional matrix adjust. Identities = 25/75 (33%), Positives = 36/75 (48%), Gaps = 6/75 (8%) Query: 104 WNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKR 163 +NEG+ L + G GLNL G + ++ + LWW+ QQ R + G K Sbjct: 958 FNEGEGDLFLISLKAGGTGLNLT-GADTVILYDLWWNPAVEQQ-----AADRAYRMGQKN 1011 Query: 164 AVFVYYLIAQNTIDE 178 V V L+A TI+E Sbjct: 1012 TVQVIKLVAHGTIEE 1026 >gi|196033339|ref|ZP_03100751.1| putative helicase [Bacillus cereus W] gi|195993773|gb|EDX57729.1| putative helicase [Bacillus cereus W] Length = 1064 Score = 40.8 bits (94), Expect = 0.13, Method: Compositional matrix adjust. Identities = 25/75 (33%), Positives = 36/75 (48%), Gaps = 6/75 (8%) Query: 104 WNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKR 163 +NEG+ L + G GLNL G + ++ + LWW+ QQ R + G K Sbjct: 958 FNEGEGDLFLISLKAGGTGLNLT-GADTVILYDLWWNPAVEQQ-----AADRAYRMGQKN 1011 Query: 164 AVFVYYLIAQNTIDE 178 V V L+A TI+E Sbjct: 1012 TVQVIKLVAHGTIEE 1026 >gi|146282998|ref|YP_001173151.1| helicase/SNF2 domain-containing protein [Pseudomonas stutzeri A1501] gi|145571203|gb|ABP80309.1| helicase/SNF2 family domain protein [Pseudomonas stutzeri A1501] Length = 773 Score = 40.8 bits (94), Expect = 0.13, Method: Composition-based stats. Identities = 29/119 (24%), Positives = 55/119 (46%), Gaps = 16/119 (13%) Query: 71 IIVAYHFNSDLARLQKAFPQ---------GRTLDKDPCTIQEWNEGKIPLLFAHPASCGH 121 +++ F S LA +++A + G T D+ ++ + G++PL + G Sbjct: 624 VLLFSQFTSMLALIEQALLKRGITYVKLTGETDDRR-TPVERFQAGEVPLFLISLKAGGT 682 Query: 122 GLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELV 180 GLNL + ++ + WW+ Q + R + G + VFVY LI + T++E + Sbjct: 683 GLNLT-AADTVIHYDPWWNPAAENQATD-----RAYRIGQDKPVFVYRLITRGTVEERI 735 >gi|322806869|emb|CBZ04439.1| hypothetical protein H04402_02632 [Clostridium botulinum H04402 065] Length = 366 Score = 40.8 bits (94), Expect = 0.13, Method: Compositional matrix adjust. Identities = 45/206 (21%), Positives = 88/206 (42%), Gaps = 33/206 (16%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEV 61 K+Y KF+++ + + S +K + QLA+ + + K+ +L+ Sbjct: 182 KEYKKFKKDRLITINNTELVGDTSLTKMLYLRQLAS------------QYNPNKLSSLKD 229 Query: 62 IIEKANAAPIIVAYHFNSDL-------ARLQK--AFPQGRTLDKDPCTIQEWNEGKIPLL 112 +E + +I+ Y+F ++ RL+K + G+T D ++ + ++ Sbjct: 230 SLE-STEDRVIIFYNFTEEMKQIKEVCGRLEKPVSIVNGQTKD-----LENYKTKDNAVV 283 Query: 113 FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIA 172 + GLNLQ N +V++SL E +Q R + G R +YLI Sbjct: 284 LVQYQAGAMGLNLQLS-NKIVYYSLPLASELFEQ-----SKKRTHRIGQTRTCMYWYLIT 337 Query: 173 QNTIDELVLQRLRTKSTIQDLLLNAL 198 +N+I+E + + L+ + D L L Sbjct: 338 KNSIEEQIFETLKERKDFTDKLFEEL 363 >gi|229059502|ref|ZP_04196884.1| Helicase, SWF/SNF [Bacillus cereus AH603] gi|228719785|gb|EEL71379.1| Helicase, SWF/SNF [Bacillus cereus AH603] Length = 1068 Score = 40.8 bits (94), Expect = 0.13, Method: Compositional matrix adjust. Identities = 25/75 (33%), Positives = 36/75 (48%), Gaps = 6/75 (8%) Query: 104 WNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKR 163 +NEG+ L + G GLNL G + ++ + LWW+ QQ R + G K Sbjct: 962 FNEGEGDLFLISLKAGGTGLNLT-GADTVILYDLWWNPAVEQQ-----AADRAYRMGQKN 1015 Query: 164 AVFVYYLIAQNTIDE 178 V V L+A TI+E Sbjct: 1016 TVQVIKLVAHGTIEE 1030 >gi|229189952|ref|ZP_04316960.1| Helicase, SWF/SNF [Bacillus cereus ATCC 10876] gi|228593444|gb|EEK51255.1| Helicase, SWF/SNF [Bacillus cereus ATCC 10876] Length = 1064 Score = 40.8 bits (94), Expect = 0.13, Method: Compositional matrix adjust. Identities = 25/75 (33%), Positives = 36/75 (48%), Gaps = 6/75 (8%) Query: 104 WNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKR 163 +NEG+ L + G GLNL G + ++ + LWW+ QQ R + G K Sbjct: 958 FNEGEGDLFLISLKAGGTGLNLT-GADTVILYDLWWNPAVEQQ-----AADRAYRMGQKN 1011 Query: 164 AVFVYYLIAQNTIDE 178 V V L+A TI+E Sbjct: 1012 TVQVIKLVAHGTIEE 1026 >gi|229196057|ref|ZP_04322809.1| Helicase, SWF/SNF [Bacillus cereus m1293] gi|228587439|gb|EEK45505.1| Helicase, SWF/SNF [Bacillus cereus m1293] Length = 1064 Score = 40.8 bits (94), Expect = 0.13, Method: Compositional matrix adjust. Identities = 25/75 (33%), Positives = 36/75 (48%), Gaps = 6/75 (8%) Query: 104 WNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKR 163 +NEG+ L + G GLNL G + ++ + LWW+ QQ R + G K Sbjct: 958 FNEGEGDLFLISLKAGGTGLNLT-GADTVILYDLWWNPAVEQQ-----AADRAYRMGQKN 1011 Query: 164 AVFVYYLIAQNTIDE 178 V V L+A TI+E Sbjct: 1012 TVQVIKLVAHGTIEE 1026 >gi|222095476|ref|YP_002529536.1| helicase, putative [Bacillus cereus Q1] gi|221239534|gb|ACM12244.1| helicase, putative [Bacillus cereus Q1] Length = 1064 Score = 40.8 bits (94), Expect = 0.13, Method: Compositional matrix adjust. Identities = 25/75 (33%), Positives = 36/75 (48%), Gaps = 6/75 (8%) Query: 104 WNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKR 163 +NEG+ L + G GLNL G + ++ + LWW+ QQ R + G K Sbjct: 958 FNEGEGDLFLISLKAGGTGLNLT-GADTVILYDLWWNPAVEQQ-----AADRAYRMGQKN 1011 Query: 164 AVFVYYLIAQNTIDE 178 V V L+A TI+E Sbjct: 1012 TVQVIKLVAHGTIEE 1026 >gi|195161916|ref|XP_002021802.1| GL26701 [Drosophila persimilis] gi|292630865|sp|B4GS98|RAD54_DROPE RecName: Full=DNA repair and recombination protein RAD54-like; AltName: Full=Protein okra gi|194103602|gb|EDW25645.1| GL26701 [Drosophila persimilis] Length = 782 Score = 40.8 bits (94), Expect = 0.13, Method: Compositional matrix adjust. Identities = 23/77 (29%), Positives = 40/77 (51%), Gaps = 6/77 (7%) Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 G GLNL G N L F W+ +Q + R+ + G K+ ++Y L+A +I+E Sbjct: 578 GCGLNL-IGANRLFMFDPDWNPANDEQAMARVW-----RDGQKKPCYIYRLVASGSIEEK 631 Query: 180 VLQRLRTKSTIQDLLLN 196 +LQR K ++ +++ Sbjct: 632 ILQRQTHKKSLSSTIID 648 >gi|47575794|ref|NP_001001241.1| RAD54-like [Xenopus (Silurana) tropicalis] gi|45708870|gb|AAH67986.1| RAD54-like (S. cerevisiae) [Xenopus (Silurana) tropicalis] Length = 742 Score = 40.8 bits (94), Expect = 0.13, Method: Compositional matrix adjust. Identities = 24/77 (31%), Positives = 39/77 (50%), Gaps = 6/77 (7%) Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 G GLNL G N LV F W+ +Q + R+ + G K+ F+Y L++ TI+E Sbjct: 575 GCGLNL-IGANRLVMFDPDWNPANDEQAMARVW-----RDGQKKTCFIYRLLSTGTIEEK 628 Query: 180 VLQRLRTKSTIQDLLLN 196 + QR K + +++ Sbjct: 629 IFQRQTHKKALSSCVVD 645 >gi|228958135|ref|ZP_04119868.1| Helicase, SWF/SNF [Bacillus thuringiensis serovar pakistani str. T13001] gi|228801518|gb|EEM48402.1| Helicase, SWF/SNF [Bacillus thuringiensis serovar pakistani str. T13001] Length = 1064 Score = 40.4 bits (93), Expect = 0.13, Method: Compositional matrix adjust. Identities = 25/75 (33%), Positives = 36/75 (48%), Gaps = 6/75 (8%) Query: 104 WNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKR 163 +NEG+ L + G GLNL G + ++ + LWW+ QQ R + G K Sbjct: 958 FNEGEGDLFLISLKAGGTGLNLT-GADTVILYDLWWNPAVEQQ-----AADRAYRMGQKN 1011 Query: 164 AVFVYYLIAQNTIDE 178 V V L+A TI+E Sbjct: 1012 TVQVIKLVAHGTIEE 1026 >gi|195031155|ref|XP_001988299.1| GH10642 [Drosophila grimshawi] gi|292630863|sp|B4JCS7|RAD54_DROGR RecName: Full=DNA repair and recombination protein RAD54-like; AltName: Full=Protein okra gi|193904299|gb|EDW03166.1| GH10642 [Drosophila grimshawi] Length = 786 Score = 40.4 bits (93), Expect = 0.13, Method: Compositional matrix adjust. Identities = 23/77 (29%), Positives = 40/77 (51%), Gaps = 6/77 (7%) Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 G GLNL G N L F W+ +Q + R+ + G K+ ++Y L+A +I+E Sbjct: 574 GCGLNL-IGANRLFMFDPDWNPANDEQAMARVW-----RDGQKKPCYIYRLVASGSIEEK 627 Query: 180 VLQRLRTKSTIQDLLLN 196 +LQR K ++ +++ Sbjct: 628 ILQRQTHKKSLSSTIID 644 >gi|206970802|ref|ZP_03231754.1| putative helicase [Bacillus cereus AH1134] gi|206734438|gb|EDZ51608.1| putative helicase [Bacillus cereus AH1134] Length = 1064 Score = 40.4 bits (93), Expect = 0.13, Method: Compositional matrix adjust. Identities = 25/75 (33%), Positives = 36/75 (48%), Gaps = 6/75 (8%) Query: 104 WNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKR 163 +NEG+ L + G GLNL G + ++ + LWW+ QQ R + G K Sbjct: 958 FNEGEGDLFLISLKAGGTGLNLT-GADTVILYDLWWNPAVEQQ-----AADRAYRMGQKN 1011 Query: 164 AVFVYYLIAQNTIDE 178 V V L+A TI+E Sbjct: 1012 TVQVIKLVAHGTIEE 1026 >gi|30019888|ref|NP_831519.1| SWF/SNF family helicase [Bacillus cereus ATCC 14579] gi|229127175|ref|ZP_04256172.1| Helicase, SWF/SNF [Bacillus cereus BDRD-Cer4] gi|29895433|gb|AAP08720.1| SWF/SNF family helicase [Bacillus cereus ATCC 14579] gi|228656291|gb|EEL12132.1| Helicase, SWF/SNF [Bacillus cereus BDRD-Cer4] Length = 1064 Score = 40.4 bits (93), Expect = 0.13, Method: Compositional matrix adjust. Identities = 25/75 (33%), Positives = 36/75 (48%), Gaps = 6/75 (8%) Query: 104 WNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKR 163 +NEG+ L + G GLNL G + ++ + LWW+ QQ R + G K Sbjct: 958 FNEGEGDLFLISLKAGGTGLNLT-GADTVILYDLWWNPAVEQQ-----AADRAYRMGQKN 1011 Query: 164 AVFVYYLIAQNTIDE 178 V V L+A TI+E Sbjct: 1012 TVQVIKLVAHGTIEE 1026 >gi|237737828|ref|ZP_04568309.1| SWF/SNF family helicase [Fusobacterium mortiferum ATCC 9817] gi|229419708|gb|EEO34755.1| SWF/SNF family helicase [Fusobacterium mortiferum ATCC 9817] Length = 913 Score = 40.4 bits (93), Expect = 0.13, Method: Composition-based stats. Identities = 25/77 (32%), Positives = 40/77 (51%), Gaps = 6/77 (7%) Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 G GLNL I ++ WW+ + +E + R + G R VF Y LI ++TI+E Sbjct: 823 GVGLNLTAADTIFIY-DPWWN-----KTVENQAIDRAYRLGQDRTVFSYKLILKDTIEEK 876 Query: 180 VLQRLRTKSTIQDLLLN 196 +LQ +K + D L++ Sbjct: 877 ILQLQESKIKLLDSLIS 893 >gi|229160810|ref|ZP_04288801.1| Helicase, SWF/SNF [Bacillus cereus R309803] gi|228622658|gb|EEK79493.1| Helicase, SWF/SNF [Bacillus cereus R309803] Length = 1068 Score = 40.4 bits (93), Expect = 0.13, Method: Compositional matrix adjust. Identities = 25/75 (33%), Positives = 36/75 (48%), Gaps = 6/75 (8%) Query: 104 WNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKR 163 +NEG+ L + G GLNL G + ++ + LWW+ QQ R + G K Sbjct: 962 FNEGEGDLFLISLKAGGTGLNLT-GADTVILYDLWWNPAVEQQ-----AADRAYRMGQKN 1015 Query: 164 AVFVYYLIAQNTIDE 178 V V L+A TI+E Sbjct: 1016 TVQVIKLVAHGTIEE 1030 >gi|224139776|ref|XP_002323271.1| chromatin remodeling complex subunit [Populus trichocarpa] gi|222867901|gb|EEF05032.1| chromatin remodeling complex subunit [Populus trichocarpa] Length = 1540 Score = 40.4 bits (93), Expect = 0.13, Method: Compositional matrix adjust. Identities = 24/78 (30%), Positives = 39/78 (50%), Gaps = 6/78 (7%) Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 G G+NL ++ + S W + Q M R + G + V VY LI + T++E Sbjct: 1296 GLGINLTAADTVIFYESDWNPTLDLQAM------DRAHRLGQTKDVTVYRLICKETVEEK 1349 Query: 180 VLQRLRTKSTIQDLLLNA 197 +LQR K+T+Q L++ Sbjct: 1350 ILQRASQKNTVQQLVMTG 1367 >gi|195435389|ref|XP_002065674.1| GK15573 [Drosophila willistoni] gi|292630875|sp|B4MX21|RAD54_DROWI RecName: Full=DNA repair and recombination protein RAD54-like; AltName: Full=Protein okra gi|194161759|gb|EDW76660.1| GK15573 [Drosophila willistoni] Length = 784 Score = 40.4 bits (93), Expect = 0.13, Method: Compositional matrix adjust. Identities = 23/77 (29%), Positives = 40/77 (51%), Gaps = 6/77 (7%) Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 G GLNL G N L F W+ +Q + R+ + G K+ ++Y L+A +I+E Sbjct: 578 GCGLNL-IGANRLFMFDPDWNPANDEQAMARVW-----RDGQKKPCYIYRLVASGSIEEK 631 Query: 180 VLQRLRTKSTIQDLLLN 196 +LQR K ++ +++ Sbjct: 632 ILQRQTHKKSLSSTIID 648 >gi|145349626|ref|XP_001419229.1| predicted protein [Ostreococcus lucimarinus CCE9901] gi|144579460|gb|ABO97522.1| predicted protein [Ostreococcus lucimarinus CCE9901] Length = 983 Score = 40.4 bits (93), Expect = 0.13, Method: Composition-based stats. Identities = 25/75 (33%), Positives = 40/75 (53%), Gaps = 6/75 (8%) Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 G G+NL GGN LV F W+ +Q R + G K+ ++Y +A TI+E Sbjct: 614 GCGINL-IGGNRLVLFDPDWNPANDKQ-----AAARCWRDGQKKKCYLYRFLAAGTIEEK 667 Query: 180 VLQRLRTKSTIQDLL 194 V QR +K ++Q+++ Sbjct: 668 VFQRQLSKESLQNVV 682 >gi|303279422|ref|XP_003059004.1| SNF2 super family [Micromonas pusilla CCMP1545] gi|226460164|gb|EEH57459.1| SNF2 super family [Micromonas pusilla CCMP1545] Length = 1131 Score = 40.4 bits (93), Expect = 0.13, Method: Composition-based stats. Identities = 42/162 (25%), Positives = 71/162 (43%), Gaps = 25/162 (15%) Query: 50 EVHDEKIKALEVII-----EKANAAPIIVAYHFNSDLARL---QKAFPQ-----GRTLDK 96 E H K L ++ E + II Y DL + Q +P G ++ K Sbjct: 531 EFHSGKFAVLARLLAILRAETKDRIVIISNYTQTLDLVQFLCKQNNYPHCRLDGGTSITK 590 Query: 97 DPCTIQEWNEGK----IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIG 152 ++++N+ + LL + CG +NL GGN LV F W+ +Q Sbjct: 591 RQKLVRQFNDPTENCFVFLLSSKAGGCG--INL-IGGNRLVLFDPDWNPANDKQ-----A 642 Query: 153 VTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 R + G K+ ++Y L A +I+E V QR +K ++Q+++ Sbjct: 643 AARCWRDGQKKKCYLYRLFATGSIEEKVFQRQLSKESLQNVV 684 >gi|229542960|ref|ZP_04432020.1| SNF2 helicase associated domain protein [Bacillus coagulans 36D1] gi|229327380|gb|EEN93055.1| SNF2 helicase associated domain protein [Bacillus coagulans 36D1] Length = 1081 Score = 40.4 bits (93), Expect = 0.13, Method: Compositional matrix adjust. Identities = 30/107 (28%), Positives = 50/107 (46%), Gaps = 13/107 (12%) Query: 104 WNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKR 163 +N G+ + + G GLNL G + +V + LWW+ +E R + G K Sbjct: 975 FNSGEKNVFLISLKAGGTGLNLT-GADTVVLYDLWWN-----PAVEEQAAGRAHRIGQKN 1028 Query: 164 AVFVYYLIAQNTIDELVLQRLRTKSTI-------QDLLLNALKKETI 203 V V LIA+ TI+E + + + K + + +LN+L +E I Sbjct: 1029 VVQVIRLIARGTIEEKIYELQQKKKELIEKVIQPGETMLNSLNEEEI 1075 >gi|119194699|ref|XP_001247953.1| hypothetical protein CIMG_01724 [Coccidioides immitis RS] Length = 846 Score = 40.4 bits (93), Expect = 0.13, Method: Compositional matrix adjust. Identities = 25/78 (32%), Positives = 39/78 (50%), Gaps = 6/78 (7%) Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 G G+NL G N LV F W+ QQ + R+ + G K+ FVY IA +I+E Sbjct: 618 GCGINL-VGANRLVLFDPDWNPAADQQALARVW-----RDGQKKDCFVYRFIATGSIEEK 671 Query: 180 VLQRLRTKSTIQDLLLNA 197 + QR K + ++++ Sbjct: 672 IFQRQSHKQLLSSCVVDS 689 >gi|52143616|ref|YP_083212.1| SWF/SNF family helicase [Bacillus cereus E33L] gi|51977085|gb|AAU18635.1| helicase, SWF/SNF family [Bacillus cereus E33L] Length = 1064 Score = 40.4 bits (93), Expect = 0.13, Method: Compositional matrix adjust. Identities = 25/75 (33%), Positives = 36/75 (48%), Gaps = 6/75 (8%) Query: 104 WNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKR 163 +NEG+ L + G GLNL G + ++ + LWW+ QQ R + G K Sbjct: 958 FNEGEGDLFLISLKAGGTGLNLT-GADTVILYDLWWNPAVEQQ-----AADRAYRMGQKN 1011 Query: 164 AVFVYYLIAQNTIDE 178 V V L+A TI+E Sbjct: 1012 TVQVIKLVAHGTIEE 1026 >gi|255941182|ref|XP_002561360.1| Pc16g10500 [Penicillium chrysogenum Wisconsin 54-1255] gi|211585983|emb|CAP93720.1| Pc16g10500 [Penicillium chrysogenum Wisconsin 54-1255] Length = 2162 Score = 40.4 bits (93), Expect = 0.13, Method: Compositional matrix adjust. Identities = 30/95 (31%), Positives = 49/95 (51%), Gaps = 7/95 (7%) Query: 100 TIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEH---QQMIERIGVTRQ 156 TIQ + K L+ S GLNLQ N ++F S ++ H M + IG R Sbjct: 2045 TIQPPSRPKA-LILNLGTSMAAGLNLQCA-NHVIFLSPYFTTSHHDYDSGMTQAIG--RA 2100 Query: 157 RQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQ 191 R+ G +R V+VY+L+ +NT D + Q+ ++ ++ Sbjct: 2101 RRFGQEREVYVYHLLVKNTYDVNIFQKAQSSKLVE 2135 >gi|193084005|gb|ACF09679.1| helicase SNF2/RAD54 family [uncultured marine crenarchaeote AD1000-202-A2] Length = 569 Score = 40.4 bits (93), Expect = 0.13, Method: Compositional matrix adjust. Identities = 31/110 (28%), Positives = 50/110 (45%), Gaps = 6/110 (5%) Query: 91 GRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 G+T I + +G L+ A + G+NL ++F L W H+Q +R Sbjct: 444 GQTDKVRQLNIDRFQDGDTKLMIAGLRAGNLGINLTRA-KYVIFGELDWSPAIHRQAEDR 502 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKK 200 + + G K VF YYLI T+DE V L KS D +++ +++ Sbjct: 503 L-----HRIGQKNTVFAYYLIGNGTLDEHVANILVDKSYEIDTIMDEVRE 547 >gi|115654057|ref|XP_001202164.1| PREDICTED: similar to putative recombination factor GdRad54, partial [Strongylocentrotus purpuratus] gi|115679178|ref|XP_790055.2| PREDICTED: similar to putative recombination factor GdRad54, partial [Strongylocentrotus purpuratus] Length = 335 Score = 40.4 bits (93), Expect = 0.13, Method: Compositional matrix adjust. Identities = 25/77 (32%), Positives = 38/77 (49%), Gaps = 6/77 (7%) Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 G GLNL G N LV F W+ Q + R+ + G K+ F+Y L+A TI+E Sbjct: 168 GCGLNL-IGANRLVMFDPDWNPANDDQAMARVW-----RDGQKKRCFIYRLLATGTIEEK 221 Query: 180 VLQRLRTKSTIQDLLLN 196 + QR K + +++ Sbjct: 222 IFQRQAHKKALSSCVVD 238 >gi|9294624|dbj|BAB02963.1| DNA repair protein RAD54-like [Arabidopsis thaliana] Length = 959 Score = 40.4 bits (93), Expect = 0.13, Method: Compositional matrix adjust. Identities = 26/75 (34%), Positives = 39/75 (52%), Gaps = 6/75 (8%) Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 G GLNL G N LV F W+ +Q R+ + G K+ V+VY ++ TI+E Sbjct: 615 GCGLNL-IGANRLVLFDPDWNPANDKQAAARVW-----RDGQKKRVYVYRFLSTGTIEEK 668 Query: 180 VLQRLRTKSTIQDLL 194 V QR +K +Q ++ Sbjct: 669 VYQRQMSKEGLQKVI 683 >gi|228990815|ref|ZP_04150780.1| Helicase, SWF/SNF [Bacillus pseudomycoides DSM 12442] gi|228769341|gb|EEM17939.1| Helicase, SWF/SNF [Bacillus pseudomycoides DSM 12442] Length = 1071 Score = 40.4 bits (93), Expect = 0.14, Method: Compositional matrix adjust. Identities = 25/75 (33%), Positives = 36/75 (48%), Gaps = 6/75 (8%) Query: 104 WNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKR 163 +NEG+ L + G GLNL G + ++ + LWW+ QQ R + G K Sbjct: 965 FNEGEGDLFLISLRAGGTGLNLT-GADTVILYDLWWNPAVEQQ-----AADRAYRMGQKN 1018 Query: 164 AVFVYYLIAQNTIDE 178 V V L+A TI+E Sbjct: 1019 TVQVIKLVAHGTIEE 1033 >gi|124007753|ref|ZP_01692456.1| helicase, SNF2 family [Microscilla marina ATCC 23134] gi|123986875|gb|EAY26647.1| helicase, SNF2 family [Microscilla marina ATCC 23134] Length = 1207 Score = 40.4 bits (93), Expect = 0.14, Method: Compositional matrix adjust. Identities = 23/80 (28%), Positives = 39/80 (48%), Gaps = 6/80 (7%) Query: 118 SCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 + G GLNL N+ + + LWW+ +E R + G + V VY +I Q T + Sbjct: 1112 AGGTGLNLTKASNV-IHYDLWWN-----PAVENQATDRAYRIGQQNNVMVYRMITQGTFE 1165 Query: 178 ELVLQRLRTKSTIQDLLLNA 197 E + ++TK + DL ++ Sbjct: 1166 EKINAMIQTKKELADLTVST 1185 >gi|328887305|emb|CCA60544.1| Helicase, SNF2 or RAD54 family [Streptomyces venezuelae ATCC 10712] Length = 1036 Score = 40.4 bits (93), Expect = 0.14, Method: Composition-based stats. Identities = 25/95 (26%), Positives = 44/95 (46%), Gaps = 6/95 (6%) Query: 101 IQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 + + G++P+ + G GLNL ++ V + WW+ +E R + G Sbjct: 919 VARFQSGEVPVFLLSLKAAGTGLNLTRAEHV-VHYDRWWN-----PAVEAQATDRAYRIG 972 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 R V V+ LIA+ TI++ + L K + D +L Sbjct: 973 QDRPVQVHRLIAEGTIEDRIATMLDRKRELADTVL 1007 >gi|317126523|ref|YP_004100635.1| SNF2-related protein [Intrasporangium calvum DSM 43043] gi|315590611|gb|ADU49908.1| SNF2-related protein [Intrasporangium calvum DSM 43043] Length = 1043 Score = 40.4 bits (93), Expect = 0.14, Method: Composition-based stats. Identities = 29/119 (24%), Positives = 52/119 (43%), Gaps = 9/119 (7%) Query: 77 FNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFS 136 F++D+A L P+ R +D Q +G P+ + G GLNL N ++ Sbjct: 906 FDTDVAYLHGGTPKKR---RDELVTQFQGDGGAPIFLLSLKAGGTGLNLTA-ANHVIHLD 961 Query: 137 LWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 WW+ +E R + G +R V V + T++E + Q + K + +L++ Sbjct: 962 RWWN-----PAVENQATDRAYRIGQQRRVQVRKFVCTGTLEEKIDQMIEEKLALANLVV 1015 >gi|321465306|gb|EFX76308.1| RAD54, DNA repair and recombination protein [Daphnia pulex] Length = 748 Score = 40.4 bits (93), Expect = 0.14, Method: Compositional matrix adjust. Identities = 24/77 (31%), Positives = 38/77 (49%), Gaps = 6/77 (7%) Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 G GLNL G N LV F W+ Q + R+ + G K+ F+Y L++ TI+E Sbjct: 582 GCGLNL-IGANRLVMFDPDWNPANDDQAMARVW-----RDGQKKPCFIYRLLSTGTIEEK 635 Query: 180 VLQRLRTKSTIQDLLLN 196 + QR K + +++ Sbjct: 636 IFQRQAHKKALSSCVVD 652 >gi|312130874|ref|YP_003998214.1| snf2-related protein [Leadbetterella byssophila DSM 17132] gi|311907420|gb|ADQ17861.1| SNF2-related protein [Leadbetterella byssophila DSM 17132] Length = 962 Score = 40.4 bits (93), Expect = 0.14, Method: Compositional matrix adjust. Identities = 26/78 (33%), Positives = 38/78 (48%), Gaps = 6/78 (7%) Query: 118 SCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 + G GLNL N+ + WW+ IE V R + G + VF Y I QNTI+ Sbjct: 871 AGGVGLNLTAAENVFLL-DPWWN-----PAIEAQAVDRAHRIGQTKTVFSYKFITQNTIE 924 Query: 178 ELVLQRLRTKSTIQDLLL 195 E +++ TK + D L+ Sbjct: 925 EKIVELQNTKRQLFDELI 942 >gi|162451262|ref|YP_001613629.1| hypothetical protein sce2990 [Sorangium cellulosum 'So ce 56'] gi|161161844|emb|CAN93149.1| hypothetical protein sce2990 [Sorangium cellulosum 'So ce 56'] Length = 1141 Score = 40.4 bits (93), Expect = 0.14, Method: Composition-based stats. Identities = 26/91 (28%), Positives = 42/91 (46%), Gaps = 6/91 (6%) Query: 91 GRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 G T D+ + N+ +P+ + G GLNL + ++ F WW+ QQ +R Sbjct: 1021 GSTKDRAERVERFQNDPSVPVFLISLKAGGTGLNLT-AADTVIHFDPWWNPAVEQQATDR 1079 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVL 181 + G + V Y LIA+ TI+E +L Sbjct: 1080 -----AHRIGQTKVVTAYRLIAEGTIEEKIL 1105 >gi|294933433|ref|XP_002780713.1| DNA helicase, putative [Perkinsus marinus ATCC 50983] gi|239890749|gb|EER12508.1| DNA helicase, putative [Perkinsus marinus ATCC 50983] Length = 318 Score = 40.4 bits (93), Expect = 0.15, Method: Compositional matrix adjust. Identities = 35/124 (28%), Positives = 56/124 (45%), Gaps = 16/124 (12%) Query: 78 NSDLARLQKAFPQGRTLDKDPCTIQEWNEGK-IPLLFAHPASCGHGLNLQYGGNILVFFS 136 N L R+ PQ K P ++++ E I + +C GL L +++VF Sbjct: 147 NFGLIRIDGQTPQ----TKRPELVKKFQEDDDIRVAVLSITACSEGLTLT-AASVVVFAE 201 Query: 137 LWW---DLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDL 193 L+W +E+ + + RIG T K V ++YLIA+ + DE V L+ K Sbjct: 202 LYWVPGTIEQAEARVHRIGQT-------KSCVDIHYLIARGSPDEAVYACLKRKKEDTSA 254 Query: 194 LLNA 197 +LN Sbjct: 255 ILNG 258 >gi|282865750|ref|ZP_06274800.1| SNF2-related protein [Streptomyces sp. ACTE] gi|282559394|gb|EFB64946.1| SNF2-related protein [Streptomyces sp. ACTE] Length = 957 Score = 40.4 bits (93), Expect = 0.15, Method: Composition-based stats. Identities = 26/95 (27%), Positives = 43/95 (45%), Gaps = 6/95 (6%) Query: 101 IQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 + + G P+ + G GLNL G++ V F WW+ +E R + G Sbjct: 843 VNRFQAGDAPVFLLSLKAAGTGLNLTRAGHV-VHFDRWWN-----PAVEAQATDRAYRIG 896 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 + V V+ LIA+ TI++ + L K + D +L Sbjct: 897 QTQPVQVHRLIAEGTIEDRIAGMLARKQGLADAVL 931 >gi|158288154|ref|XP_310015.4| AGAP009344-PA [Anopheles gambiae str. PEST] gi|157019247|gb|EAA05751.4| AGAP009344-PA [Anopheles gambiae str. PEST] Length = 961 Score = 40.4 bits (93), Expect = 0.15, Method: Compositional matrix adjust. Identities = 26/71 (36%), Positives = 35/71 (49%), Gaps = 6/71 (8%) Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 G G+NL G N ++ W+ QQ I RI + G KR +VY LIA T++E Sbjct: 784 GQGINLT-GANRVIILDTSWNPSNDQQNIFRIF-----RLGQKRKCYVYRLIAAGTMEEK 837 Query: 180 VLQRLRTKSTI 190 V R TK + Sbjct: 838 VYSRSVTKQAL 848 >gi|332019859|gb|EGI60320.1| DNA repair and recombination protein RAD54B [Acromyrmex echinatior] Length = 857 Score = 40.4 bits (93), Expect = 0.15, Method: Compositional matrix adjust. Identities = 29/92 (31%), Positives = 47/92 (51%), Gaps = 8/92 (8%) Query: 105 NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA 164 + K+ LL A G GLNL G + LV F W+ Q + RI + G KR Sbjct: 676 DNSKVLLLSAKAG--GVGLNLP-GASRLVLFDSDWNPASDMQAMARIW-----RDGQKRN 727 Query: 165 VFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 V++Y L+ TI+E + QR +K+ + + +++ Sbjct: 728 VYIYRLLTTGTIEEKIYQRQISKANLSETVVD 759 >gi|312891015|ref|ZP_07750539.1| SNF2-related protein [Mucilaginibacter paludis DSM 18603] gi|311296482|gb|EFQ73627.1| SNF2-related protein [Mucilaginibacter paludis DSM 18603] Length = 945 Score = 40.4 bits (93), Expect = 0.15, Method: Compositional matrix adjust. Identities = 26/93 (27%), Positives = 44/93 (47%), Gaps = 7/93 (7%) Query: 106 EGKIPLLFAHPASCGH-GLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA 164 EG +F G+ GLNL + ++ F WW+ QQ I+R + G + Sbjct: 841 EGNTTNIFLISLMAGNMGLNLT-AADYVILFDPWWNTAVEQQAIDRT-----HRIGQTKK 894 Query: 165 VFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 VF Y +I ++TI+E ++ K ++ D L+ Sbjct: 895 VFAYKMICRDTIEEKIINLQEKKKSLSDSLIGG 927 >gi|312196824|ref|YP_004016885.1| SNF2-related protein [Frankia sp. EuI1c] gi|311228160|gb|ADP81015.1| SNF2-related protein [Frankia sp. EuI1c] Length = 1282 Score = 40.4 bits (93), Expect = 0.15, Method: Composition-based stats. Identities = 27/100 (27%), Positives = 46/100 (46%), Gaps = 7/100 (7%) Query: 82 ARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDL 141 A ++ + GRT D+ ++ + GK + + G GLNL + WW+ Sbjct: 1156 AGVEYCYLDGRTRDRAD-VVERFRSGKASVFLISLKAGGFGLNLTEA-DYCFLLDPWWNP 1213 Query: 142 EEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVL 181 Q ++R + G R V VY L+A++TI+E V+ Sbjct: 1214 ATEAQAVDR-----THRIGQTRNVLVYRLVARDTIEEKVM 1248 >gi|308446187|ref|XP_003087115.1| hypothetical protein CRE_23866 [Caenorhabditis remanei] gi|308262104|gb|EFP06057.1| hypothetical protein CRE_23866 [Caenorhabditis remanei] Length = 437 Score = 40.4 bits (93), Expect = 0.15, Method: Compositional matrix adjust. Identities = 28/106 (26%), Positives = 49/106 (46%), Gaps = 7/106 (6%) Query: 91 GRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 G+T +D I + G IP+ + G GLNL + ++ + WW+ Q +R Sbjct: 320 GQTKKRDEV-ITAFQAGDIPVFLISLKAGGVGLNL-TAADTVIHYDPWWNPAAEDQASDR 377 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + G + VFVY LI +I+E +L + K+ + +L+ Sbjct: 378 AW-----RIGQDKPVFVYKLITNQSIEEKILALQKNKADLAKSILS 418 >gi|258650324|ref|YP_003199480.1| SNF2-like protein [Nakamurella multipartita DSM 44233] gi|258553549|gb|ACV76491.1| SNF2-related protein [Nakamurella multipartita DSM 44233] Length = 1141 Score = 40.4 bits (93), Expect = 0.15, Method: Composition-based stats. Identities = 29/107 (27%), Positives = 48/107 (44%), Gaps = 7/107 (6%) Query: 91 GRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 GRT D+ ++ + G P+ + G GLNL + + WW+ Q I+R Sbjct: 1020 GRTKDRS-AVVEAFRTGVAPVFLISLKAGGFGLNLTEA-DYCILLDPWWNPAAEAQAIDR 1077 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + G + V VY +A+ TI+E V+ K+ + D +L A Sbjct: 1078 -----AHRIGQTKNVIVYRYVARGTIEEKVMALKAGKAKLFDDVLGA 1119 >gi|261368900|ref|ZP_05981783.1| SNF2 family protein [Subdoligranulum variabile DSM 15176] gi|282568998|gb|EFB74533.1| SNF2 family protein [Subdoligranulum variabile DSM 15176] Length = 811 Score = 40.4 bits (93), Expect = 0.15, Method: Compositional matrix adjust. Identities = 26/101 (25%), Positives = 51/101 (50%), Gaps = 6/101 (5%) Query: 101 IQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 ++++ + + + G GLNL +++++ WW+ QQ I+R + G Sbjct: 705 VEQFEKASAGIFLISIKAGGVGLNLTSAQDVIIY-DPWWNPFVEQQAIDR-----AYRIG 758 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 ++AV VY L+A NTI+E +L + K + L+N + + Sbjct: 759 QQQAVNVYKLVAANTIEEKILDMQKDKEQDFEELINGISTD 799 >gi|3329473|gb|AAC26857.1| RAD54 DNA repair protein [Drosophila melanogaster] Length = 628 Score = 40.4 bits (93), Expect = 0.15, Method: Compositional matrix adjust. Identities = 23/77 (29%), Positives = 40/77 (51%), Gaps = 6/77 (7%) Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 G GLNL G N L F W+ +Q + R+ + G K+ ++Y L+A +I+E Sbjct: 424 GCGLNL-IGANRLFMFDPDWNPANDEQAMARVW-----RDGQKKPCYIYRLVASGSIEEK 477 Query: 180 VLQRLRTKSTIQDLLLN 196 +LQR K ++ +++ Sbjct: 478 ILQRQTHKKSLSSTIID 494 >gi|156845511|ref|XP_001645646.1| hypothetical protein Kpol_541p31 [Vanderwaltozyma polyspora DSM 70294] gi|156116312|gb|EDO17788.1| hypothetical protein Kpol_541p31 [Vanderwaltozyma polyspora DSM 70294] Length = 941 Score = 40.4 bits (93), Expect = 0.15, Method: Compositional matrix adjust. Identities = 26/87 (29%), Positives = 40/87 (45%), Gaps = 8/87 (9%) Query: 111 LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYL 170 LL + CG L G N L+ W+ QQ + R+ + G K+ F+Y Sbjct: 772 LLSSKAGGCGINL---IGANRLILLDPDWNPAADQQALARVW-----RDGQKKDCFIYRF 823 Query: 171 IAQNTIDELVLQRLRTKSTIQDLLLNA 197 IA TI+E V QR K ++ +++A Sbjct: 824 IATGTIEEKVYQRQSMKMSLSSCVVDA 850 >gi|72012428|ref|XP_783733.1| PREDICTED: similar to putative recombination factor GdRad54 [Strongylocentrotus purpuratus] gi|115973296|ref|XP_001183354.1| PREDICTED: similar to putative recombination factor GdRad54 [Strongylocentrotus purpuratus] Length = 834 Score = 40.4 bits (93), Expect = 0.15, Method: Compositional matrix adjust. Identities = 25/77 (32%), Positives = 38/77 (49%), Gaps = 6/77 (7%) Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 G GLNL G N LV F W+ Q + R+ + G K+ F+Y L+A TI+E Sbjct: 667 GCGLNL-IGANRLVMFDPDWNPANDDQAMARVW-----RDGQKKRCFIYRLLATGTIEEK 720 Query: 180 VLQRLRTKSTIQDLLLN 196 + QR K + +++ Sbjct: 721 IFQRQAHKKALSSCVVD 737 >gi|83591548|ref|YP_425300.1| SNF2 helicase-like protein [Rhodospirillum rubrum ATCC 11170] gi|83574462|gb|ABC21013.1| SNF2 helicase-related protein [Rhodospirillum rubrum ATCC 11170] Length = 1209 Score = 40.4 bits (93), Expect = 0.15, Method: Composition-based stats. Identities = 26/107 (24%), Positives = 47/107 (43%), Gaps = 7/107 (6%) Query: 91 GRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 G T D+D + + G +P+ + G GL L + ++ + WW+ +E Sbjct: 1089 GETRDRD-TPVTRFQSGAVPVFLISLKAGGTGLTLT-AADTVIHYDPWWN-----PAVEA 1141 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 R + G + VFV+ L+A T++E +L K + D L + Sbjct: 1142 QATDRAHRIGQDKPVFVHKLVAAGTVEERILALQDRKRGLLDGLFDG 1188 >gi|229004592|ref|ZP_04162330.1| Helicase, SWF/SNF [Bacillus mycoides Rock1-4] gi|228756633|gb|EEM05940.1| Helicase, SWF/SNF [Bacillus mycoides Rock1-4] Length = 887 Score = 40.4 bits (93), Expect = 0.16, Method: Compositional matrix adjust. Identities = 25/75 (33%), Positives = 36/75 (48%), Gaps = 6/75 (8%) Query: 104 WNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKR 163 +NEG+ L + G GLNL G + ++ + LWW+ QQ R + G K Sbjct: 781 FNEGEGDLFLISLRAGGTGLNLT-GADTVILYDLWWNPAVEQQ-----AADRAYRMGQKN 834 Query: 164 AVFVYYLIAQNTIDE 178 V V L+A TI+E Sbjct: 835 TVQVIKLVAHGTIEE 849 >gi|260815483|ref|XP_002602502.1| hypothetical protein BRAFLDRAFT_281964 [Branchiostoma floridae] gi|229287813|gb|EEN58514.1| hypothetical protein BRAFLDRAFT_281964 [Branchiostoma floridae] Length = 700 Score = 40.4 bits (93), Expect = 0.16, Method: Compositional matrix adjust. Identities = 28/106 (26%), Positives = 49/106 (46%), Gaps = 8/106 (7%) Query: 93 TLDKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 T+ K ++ +N P + + G GLNL G N LV F W+ +Q + R Sbjct: 504 TIKKRAKVVERFNNPSSPEFIFMLSSKAGGCGLNL-IGANRLVMFDPDWNPANDEQAMAR 562 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + + G K+ ++Y L+A TI+E + QR K + +++ Sbjct: 563 VW-----RDGQKKQCYIYRLLATGTIEEKIFQRQAHKKALSSCVVD 603 >gi|228920559|ref|ZP_04083904.1| Helicase, SWF/SNF [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] gi|228839189|gb|EEM84485.1| Helicase, SWF/SNF [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] Length = 1064 Score = 40.4 bits (93), Expect = 0.16, Method: Compositional matrix adjust. Identities = 25/75 (33%), Positives = 36/75 (48%), Gaps = 6/75 (8%) Query: 104 WNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKR 163 +NEG+ L + G GLNL G + ++ + LWW+ QQ R + G K Sbjct: 958 FNEGEGNLFLISLKAGGTGLNLT-GADTVILYDLWWNPAVEQQ-----AADRAYRMGQKN 1011 Query: 164 AVFVYYLIAQNTIDE 178 V V L+A TI+E Sbjct: 1012 TVQVIKLVAHGTIEE 1026 >gi|242047042|ref|XP_002461267.1| hypothetical protein SORBIDRAFT_02g043870 [Sorghum bicolor] gi|241924644|gb|EER97788.1| hypothetical protein SORBIDRAFT_02g043870 [Sorghum bicolor] Length = 1205 Score = 40.4 bits (93), Expect = 0.16, Method: Compositional matrix adjust. Identities = 28/90 (31%), Positives = 43/90 (47%), Gaps = 6/90 (6%) Query: 106 EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 EGK +L A +C G++L G + LV W+ + +Q I R + G +R V Sbjct: 1082 EGKRKVLIASTTACAEGISLT-GASRLVMLDSEWNHSKTRQAI-----ARAFRPGQERMV 1135 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 FVY L+A T +E R K+ I ++ Sbjct: 1136 FVYLLVASGTWEEDKYNSNRRKAWIAKMVF 1165 >gi|241950361|ref|XP_002417903.1| SWI/SNF family member, DNA-dependent ATPase, DNA repair and recombination protein, putative [Candida dubliniensis CD36] gi|223641241|emb|CAX45621.1| SWI/SNF family member, DNA-dependent ATPase, DNA repair and recombination protein, putative [Candida dubliniensis CD36] Length = 839 Score = 40.4 bits (93), Expect = 0.16, Method: Compositional matrix adjust. Identities = 26/98 (26%), Positives = 47/98 (47%), Gaps = 8/98 (8%) Query: 101 IQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQ 158 + ++N+ P + + G G+NL G N LV W+ QQ + R+ + Sbjct: 656 VDKFNDPNGPEFIFLLSSKAGGCGINL-IGANRLVLIDPDWNPASDQQALARVW-----R 709 Query: 159 AGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 G K+ F+Y LI+ TI+E + QR K ++ +++ Sbjct: 710 DGQKKDCFIYRLISTGTIEEKIFQRQSMKMSLSSCVVD 747 >gi|26554357|ref|NP_758291.1| helicase/SNF2 domain-containing protein [Mycoplasma penetrans HF-2] gi|26454367|dbj|BAC44695.1| helicase with SNF2 domain [Mycoplasma penetrans HF-2] Length = 1041 Score = 40.4 bits (93), Expect = 0.16, Method: Compositional matrix adjust. Identities = 26/103 (25%), Positives = 50/103 (48%), Gaps = 8/103 (7%) Query: 105 NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA 164 N+ I + + G GL L N ++ + WW+L +E R + G ++ Sbjct: 935 NKNNIKIFLISLKAGGTGLTLT-SANAVIHYDPWWNLS-----LENQATDRAHRIGQEKN 988 Query: 165 VFVYYLIAQNTIDELVLQRLRTKSTIQDLLL--NALKKETIHV 205 VF+Y LI +++I+E +L +K I + + N+ K +I++ Sbjct: 989 VFIYKLIVKDSIEEKILSLQESKREIINQIFDENSSNKNSINI 1031 >gi|325118669|emb|CBZ54220.1| hypothetical protein NCLIV_046520 [Neospora caninum Liverpool] Length = 1703 Score = 40.4 bits (93), Expect = 0.16, Method: Compositional matrix adjust. Identities = 28/93 (30%), Positives = 40/93 (43%), Gaps = 5/93 (5%) Query: 105 NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA 164 N+ + +L + G GLNLQ I WW+ Q I+R QRQ + Sbjct: 1597 NDPSLKVLLISLKAGGEGLNLQIASRIF-LMDPWWNPAAEMQAIQRAHRIGQRQ----KE 1651 Query: 165 VFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 V IA+ TI+E +LQ K + D + A Sbjct: 1652 VIAVRFIAEKTIEERILQLQEKKQLVFDGTVGA 1684 >gi|168051599|ref|XP_001778241.1| SNF2 family DNA-dependent ATPase [Physcomitrella patens subsp. patens] gi|162670338|gb|EDQ56908.1| SNF2 family DNA-dependent ATPase [Physcomitrella patens subsp. patens] Length = 1245 Score = 40.4 bits (93), Expect = 0.16, Method: Compositional matrix adjust. Identities = 26/100 (26%), Positives = 49/100 (49%), Gaps = 7/100 (7%) Query: 105 NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA 164 N K L + A G G+NL ++++ S W + Q M R + G + Sbjct: 684 NSTKFCFLLSTRAG-GLGINLATADTVIIYDSDWNPHADLQAM------ARAHRLGQQNK 736 Query: 165 VFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIH 204 V ++ L+ + TI+E ++Q + K ++ L++ +KKE I+ Sbjct: 737 VMIFRLVTRGTIEERMMQMTKKKMVLEHLVVGRMKKENIN 776 >gi|302681469|ref|XP_003030416.1| hypothetical protein SCHCODRAFT_58011 [Schizophyllum commune H4-8] gi|300104107|gb|EFI95513.1| hypothetical protein SCHCODRAFT_58011 [Schizophyllum commune H4-8] Length = 1312 Score = 40.4 bits (93), Expect = 0.16, Method: Compositional matrix adjust. Identities = 21/88 (23%), Positives = 45/88 (51%), Gaps = 6/88 (6%) Query: 118 SCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 + G G+NL+ +++F S W + Q M R + G K V VY ++++T++ Sbjct: 630 AGGLGINLETADTVIIFDSDWNPQNDLQAM------ARAHRIGQKSHVSVYRFVSKDTVE 683 Query: 178 ELVLQRLRTKSTIQDLLLNALKKETIHV 205 E +L++ + K ++ ++N + H+ Sbjct: 684 EEILEKAKAKMVLEYAIINQMDTTQAHL 711 >gi|300784409|ref|YP_003764700.1| SNF2/RAD54 family helicase [Amycolatopsis mediterranei U32] gi|299793923|gb|ADJ44298.1| SNF2/RAD54 family helicase [Amycolatopsis mediterranei U32] Length = 933 Score = 40.4 bits (93), Expect = 0.16, Method: Composition-based stats. Identities = 25/97 (25%), Positives = 46/97 (47%), Gaps = 6/97 (6%) Query: 101 IQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 + + G+IP+ + G GLNL ++ + + WW+ +E R + G Sbjct: 821 VDRFQAGEIPVFLLSLKAGGVGLNLTRATHV-IHYDRWWN-----PAVEDQATDRAYRIG 874 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 R V V+ LIA+ T++E + Q L K + + ++ A Sbjct: 875 QDRPVQVHRLIAEGTLEERIAQVLEKKRGLAESIVGA 911 >gi|195398201|ref|XP_002057711.1| GJ18280 [Drosophila virilis] gi|292630877|sp|B4M9A8|RAD54_DROVI RecName: Full=DNA repair and recombination protein RAD54-like; AltName: Full=Protein okra gi|194141365|gb|EDW57784.1| GJ18280 [Drosophila virilis] Length = 786 Score = 40.4 bits (93), Expect = 0.16, Method: Compositional matrix adjust. Identities = 23/77 (29%), Positives = 40/77 (51%), Gaps = 6/77 (7%) Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 G GLNL G N L F W+ +Q + R+ + G K+ ++Y L+A +I+E Sbjct: 574 GCGLNL-IGANRLFMFDPDWNPANDEQAMARVW-----RDGQKKPCYIYRLVASGSIEEK 627 Query: 180 VLQRLRTKSTIQDLLLN 196 +LQR K ++ +++ Sbjct: 628 ILQRQTHKKSLSSSIID 644 >gi|320039340|gb|EFW21274.1| SNF2 family domain-containing protein [Coccidioides posadasii str. Silveira] Length = 797 Score = 40.4 bits (93), Expect = 0.16, Method: Compositional matrix adjust. Identities = 25/78 (32%), Positives = 39/78 (50%), Gaps = 6/78 (7%) Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 G G+NL G N LV F W+ QQ + R+ + G K+ FVY IA +I+E Sbjct: 631 GCGINL-VGANRLVLFDPDWNPAADQQALARVW-----RDGQKKDCFVYRFIATGSIEEK 684 Query: 180 VLQRLRTKSTIQDLLLNA 197 + QR K + ++++ Sbjct: 685 IFQRQSHKQLLSSCVVDS 702 >gi|228996916|ref|ZP_04156549.1| Helicase, SWF/SNF [Bacillus mycoides Rock3-17] gi|228762795|gb|EEM11709.1| Helicase, SWF/SNF [Bacillus mycoides Rock3-17] Length = 1025 Score = 40.4 bits (93), Expect = 0.16, Method: Compositional matrix adjust. Identities = 25/75 (33%), Positives = 36/75 (48%), Gaps = 6/75 (8%) Query: 104 WNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKR 163 +NEG+ L + G GLNL G + ++ + LWW+ QQ R + G K Sbjct: 919 FNEGEGDLFLISLRAGGTGLNLT-GADTVILYDLWWNPAVEQQ-----AADRAYRMGQKN 972 Query: 164 AVFVYYLIAQNTIDE 178 V V L+A TI+E Sbjct: 973 TVQVIKLVAHGTIEE 987 >gi|62738897|pdb|1Z3I|X Chain X, Structure Of The Swi2SNF2 CHROMATIN REMODELING DOMAIN OF Eukaryotic Rad54 Length = 644 Score = 40.4 bits (93), Expect = 0.16, Method: Compositional matrix adjust. Identities = 24/77 (31%), Positives = 40/77 (51%), Gaps = 6/77 (7%) Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 G GLNL G N LV F W+ +Q + R+ + G K+ ++Y L++ TI+E Sbjct: 480 GCGLNL-IGANRLVMFDPDWNPANDEQAMARVW-----RDGQKKTCYIYRLLSTGTIEEK 533 Query: 180 VLQRLRTKSTIQDLLLN 196 +LQR K + +++ Sbjct: 534 ILQRQAHKKALSSCVVD 550 >gi|261408135|ref|YP_003244376.1| SNF2-like protein [Paenibacillus sp. Y412MC10] gi|261284598|gb|ACX66569.1| SNF2-related protein [Paenibacillus sp. Y412MC10] Length = 1111 Score = 40.0 bits (92), Expect = 0.17, Method: Compositional matrix adjust. Identities = 26/94 (27%), Positives = 50/94 (53%), Gaps = 7/94 (7%) Query: 102 QEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGF 161 + +NEG+ + + G GLNL + ++ + LWW+ QQ ++ R + G Sbjct: 1001 ERFNEGEREVFLISLKAGGTGLNLTG-ADTVILYDLWWNPAVEQQAMD-----RAHRIGQ 1054 Query: 162 KRAVFVYYLIAQNTI-DELVLQRLRTKSTIQDLL 194 K+ V V ++Q+TI D++V + + K I++L+ Sbjct: 1055 KKVVQVIRFVSQDTIEDKMVALQQKKKDLIEELV 1088 >gi|15230608|ref|NP_187252.1| ATCHR12; ATP binding / DNA binding / helicase/ nucleic acid binding [Arabidopsis thaliana] gi|6671969|gb|AAF23228.1|AC013454_15 putative transcriptional regulator [Arabidopsis thaliana] Length = 1132 Score = 40.0 bits (92), Expect = 0.17, Method: Compositional matrix adjust. Identities = 27/105 (25%), Positives = 54/105 (51%), Gaps = 8/105 (7%) Query: 95 DKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIG 152 D+ ++++NE P + + G GLNLQ +++F S W + QM ++ Sbjct: 796 DQRGLLLKQFNEPDSPYFMFLLSTRAGGLGLNLQTADTVIIFDSDW-----NPQM-DQQA 849 Query: 153 VTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 R + G K+ V V+ L++ +++E++L+R + K I ++ A Sbjct: 850 EDRAHRIGQKKEVRVFVLVSVGSVEEVILERAKQKMGIDAKVIQA 894 >gi|327351006|gb|EGE79863.1| SNF2 family helicase [Ajellomyces dermatitidis ATCC 18188] Length = 931 Score = 40.0 bits (92), Expect = 0.17, Method: Compositional matrix adjust. Identities = 38/155 (24%), Positives = 63/155 (40%), Gaps = 20/155 (12%) Query: 50 EVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQ------------GR--TLD 95 E KI+AL I+ AP F+ ++ L PQ GR + Sbjct: 755 ETTSSKIEALLKILTAKGQAPNTKTVVFSQWVSFLDIVEPQLARNGITFARIDGRMSSAK 814 Query: 96 KDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTR 155 +D N+ +L A C GLNL N ++ WW Q ++R+ Sbjct: 815 RDAAMKALSNDPNCTVLLASLNVCSVGLNL-VAANQVILADSWWAPAIEDQAVDRV---- 869 Query: 156 QRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 + G KR ++ L+ +N+I++ VL + + K T+ Sbjct: 870 -YRLGQKRPTTIWRLVMENSIEDRVLHKQKEKRTL 903 >gi|239610082|gb|EEQ87069.1| SNF2 family helicase [Ajellomyces dermatitidis ER-3] Length = 931 Score = 40.0 bits (92), Expect = 0.17, Method: Compositional matrix adjust. Identities = 38/155 (24%), Positives = 63/155 (40%), Gaps = 20/155 (12%) Query: 50 EVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQ------------GR--TLD 95 E KI+AL I+ AP F+ ++ L PQ GR + Sbjct: 755 ETTSSKIEALLKILTAKGQAPNTKTVVFSQWVSFLDIVEPQLARNGITFARIDGRMSSAK 814 Query: 96 KDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTR 155 +D N+ +L A C GLNL N ++ WW Q ++R+ Sbjct: 815 RDAAMKALSNDPNCTVLLASLNVCSVGLNL-VAANQVILADSWWAPAIEDQAVDRV---- 869 Query: 156 QRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 + G KR ++ L+ +N+I++ VL + + K T+ Sbjct: 870 -YRLGQKRPTTIWRLVMENSIEDRVLHKQKEKRTL 903 >gi|261198487|ref|XP_002625645.1| SNF2 family helicase [Ajellomyces dermatitidis SLH14081] gi|239594797|gb|EEQ77378.1| SNF2 family helicase [Ajellomyces dermatitidis SLH14081] Length = 929 Score = 40.0 bits (92), Expect = 0.17, Method: Compositional matrix adjust. Identities = 38/155 (24%), Positives = 63/155 (40%), Gaps = 20/155 (12%) Query: 50 EVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQ------------GR--TLD 95 E KI+AL I+ AP F+ ++ L PQ GR + Sbjct: 753 ETTSSKIEALLKILTAKGQAPNTKTVVFSQWVSFLDIVEPQLARNGITFARIDGRMSSAK 812 Query: 96 KDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTR 155 +D N+ +L A C GLNL N ++ WW Q ++R+ Sbjct: 813 RDAAMKALSNDPNCTVLLASLNVCSVGLNL-VAANQVILADSWWAPAIEDQAVDRV---- 867 Query: 156 QRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 + G KR ++ L+ +N+I++ VL + + K T+ Sbjct: 868 -YRLGQKRPTTIWRLVMENSIEDRVLHKQKEKRTL 901 >gi|205375279|ref|ZP_03228069.1| SNF2 family helicase [Bacillus coahuilensis m4-4] Length = 248 Score = 40.0 bits (92), Expect = 0.17, Method: Compositional matrix adjust. Identities = 25/97 (25%), Positives = 45/97 (46%), Gaps = 6/97 (6%) Query: 101 IQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 +Q++ G+ P+ + G GLNL N +V + WW+ +E R + G Sbjct: 139 VQQFQNGEFPVFILSLKAGGTGLNLT-AANHVVHYDRWWN-----PAVENQATDRAYRIG 192 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + V V+ LIA T++E + L K + D ++ + Sbjct: 193 QTKFVHVHKLIASGTLEEKIDGMLEKKQALNDDIIQS 229 >gi|167535609|ref|XP_001749478.1| hypothetical protein [Monosiga brevicollis MX1] gi|163772106|gb|EDQ85763.1| predicted protein [Monosiga brevicollis MX1] Length = 1903 Score = 40.0 bits (92), Expect = 0.17, Method: Compositional matrix adjust. Identities = 26/85 (30%), Positives = 43/85 (50%), Gaps = 7/85 (8%) Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 G G+NL I++F S W + Q + R + G K V VY ++ NT++E Sbjct: 1023 GLGINLTTADTIIIFDSDWNPHADLQ------ALARAHRIGQKNLVMVYRFVSVNTVEER 1076 Query: 180 VLQRLRTKSTI-QDLLLNALKKETI 203 +L+R R K + Q + ++ LKK + Sbjct: 1077 ILRRAREKLRLDQAVRMDKLKKSEL 1101 >gi|79748111|ref|NP_001032178.1| helicase, lymphoid-specific [Danio rerio] gi|52001265|gb|AAU21503.1| PASG [Danio rerio] Length = 853 Score = 40.0 bits (92), Expect = 0.17, Method: Compositional matrix adjust. Identities = 29/104 (27%), Positives = 50/104 (48%), Gaps = 12/104 (11%) Query: 95 DKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLW---WDLEEHQQMIERI 151 D+D + ++ ++ L + G G+NL +++F S W DL+ Q RI Sbjct: 669 DRDENMKKFSSDPEVFLFLLSTRAGGLGINLTSADTVIIFDSDWNPQADLQ-AQDRCHRI 727 Query: 152 GVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 G T+ V V+ LI NTIDE +L+R K ++ +++ Sbjct: 728 GQTK--------PVVVHRLITANTIDEKILERASAKRKLEKMVI 763 >gi|15896248|ref|NP_349597.1| SNF2 family DNA/RNA helicase [Clostridium acetobutylicum ATCC 824] gi|15026052|gb|AAK80937.1|AE007796_7 Superfamily II DNA/RNA helicase, SNF2 family [Clostridium acetobutylicum ATCC 824] gi|325510403|gb|ADZ22039.1| Superfamily II DNA/RNA helicase, SNF2 family [Clostridium acetobutylicum EA 2018] Length = 1052 Score = 40.0 bits (92), Expect = 0.17, Method: Composition-based stats. Identities = 39/140 (27%), Positives = 62/140 (44%), Gaps = 16/140 (11%) Query: 66 ANAAPIIVAYHFNSDLARLQKA---------FPQGRTLDKDPCTI-QEWNEGKIPLLFAH 115 AN I+V F S L ++ + G T KD + E+N+GK + Sbjct: 895 ANRHRILVFSQFTSVLKSIKDKLIEKDIDVMYLDGNTKMKDRFQLADEFNKGKGEVFLIS 954 Query: 116 PASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNT 175 + G GLNL G +I+V F WW+ +E R + G K+ V + LI + T Sbjct: 955 LKAGGTGLNLT-GADIVVHFDPWWN-----PAVENQASDRAHRIGQKKNVEIIKLITRGT 1008 Query: 176 IDELVLQRLRTKSTIQDLLL 195 I+E + + + K + D +L Sbjct: 1009 IEEKIYKLQQEKKKMVDNVL 1028 >gi|307776522|pdb|3MWY|W Chain W, Crystal Structure Of The Chromodomain-Atpase Portion Of The Yeast Chd1 Chromatin Remodeler Length = 800 Score = 40.0 bits (92), Expect = 0.17, Method: Compositional matrix adjust. Identities = 23/74 (31%), Positives = 39/74 (52%), Gaps = 6/74 (8%) Query: 118 SCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 + G G+NL +++F S W + Q M R + G K V VY L++++T++ Sbjct: 634 AGGLGINLMTADTVVIFDSDWNPQADLQAM------ARAHRIGQKNHVMVYRLVSKDTVE 687 Query: 178 ELVLQRLRTKSTIQ 191 E VL+R R K ++ Sbjct: 688 EEVLERARKKMILE 701 >gi|303390899|ref|XP_003073680.1| putative transcriptional activator [Encephalitozoon intestinalis ATCC 50506] gi|303302827|gb|ADM12320.1| putative transcriptional activator [Encephalitozoon intestinalis ATCC 50506] Length = 879 Score = 40.0 bits (92), Expect = 0.17, Method: Compositional matrix adjust. Identities = 25/97 (25%), Positives = 43/97 (44%), Gaps = 6/97 (6%) Query: 101 IQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 I++W + + G G+NL ++ + S W + Q M R + G Sbjct: 781 IRDWQTNDKFIFLLSTRAGGLGINLTAADTVIFYDSDWNPTADQQAM------DRAHRLG 834 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 R V VY LI + T++E VL+ K IQ ++++ Sbjct: 835 QTRDVTVYRLITRGTVEEKVLESANRKDEIQKMVIHG 871 >gi|302691444|ref|XP_003035401.1| hypothetical protein SCHCODRAFT_81511 [Schizophyllum commune H4-8] gi|300109097|gb|EFJ00499.1| hypothetical protein SCHCODRAFT_81511 [Schizophyllum commune H4-8] Length = 842 Score = 40.0 bits (92), Expect = 0.17, Method: Compositional matrix adjust. Identities = 28/92 (30%), Positives = 43/92 (46%), Gaps = 7/92 (7%) Query: 105 NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA 164 N K L + A G G+NL G N L+ F W+ QQ + R+ + G K+ Sbjct: 667 NTEKFVFLLSSKAG-GCGINL-IGANRLILFDPDWNPAADQQALARVW-----RDGQKKE 719 Query: 165 VFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 FVY I+ TI+E + QR K + +++ Sbjct: 720 CFVYRFISTGTIEEKIFQRQANKQALSSSVVD 751 >gi|224165209|ref|XP_002338786.1| hypothetical protein POPTRDRAFT_795191 [Populus trichocarpa] gi|222873460|gb|EEF10591.1| hypothetical protein POPTRDRAFT_795191 [Populus trichocarpa] Length = 101 Score = 40.0 bits (92), Expect = 0.18, Method: Compositional matrix adjust. Identities = 27/100 (27%), Positives = 50/100 (50%), Gaps = 8/100 (8%) Query: 103 EWNEGKI-PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGF 161 ++ G+I P L A+ G G+NL + WW+ E +Q I+R+ Q G Sbjct: 5 QYTPGRIFPTLLANVKVSGAGINLTAASEVY-LMEPWWNSEFEEQAIDRV-----HQYGQ 58 Query: 162 KRAVFVYYLIAQNTIDE-LVLQRLRTKSTIQDLLLNALKK 200 ++ V + LI Q++I+E +++ + R K I+ + K+ Sbjct: 59 EKNVIIVRLIVQDSIEERILMMQERKKQAIEAFGMQGPKE 98 >gi|303311053|ref|XP_003065538.1| DNA repair protein rhp54, putative [Coccidioides posadasii C735 delta SOWgp] gi|240105200|gb|EER23393.1| DNA repair protein rhp54, putative [Coccidioides posadasii C735 delta SOWgp] Length = 799 Score = 40.0 bits (92), Expect = 0.18, Method: Compositional matrix adjust. Identities = 25/78 (32%), Positives = 39/78 (50%), Gaps = 6/78 (7%) Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 G G+NL G N LV F W+ QQ + R+ + G K+ FVY IA +I+E Sbjct: 633 GCGINL-VGANRLVLFDPDWNPAADQQALARVW-----RDGQKKDCFVYRFIATGSIEEK 686 Query: 180 VLQRLRTKSTIQDLLLNA 197 + QR K + ++++ Sbjct: 687 IFQRQSHKQLLSSCVVDS 704 >gi|330504452|ref|YP_004381321.1| non-specific serine/threonine protein kinase [Pseudomonas mendocina NK-01] gi|328918738|gb|AEB59569.1| non-specific serine/threonine protein kinase [Pseudomonas mendocina NK-01] Length = 876 Score = 40.0 bits (92), Expect = 0.18, Method: Compositional matrix adjust. Identities = 24/88 (27%), Positives = 42/88 (47%), Gaps = 7/88 (7%) Query: 91 GRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 G T D+ ++ + G+ P+ + G GLNL + ++ F WW+ Q +R Sbjct: 756 GSTQDRR-TPVERFQAGEFPVFLISLKAGGSGLNL-TAADTVIHFDPWWNPAAEAQASDR 813 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDE 178 + G + VFVY LIA+ +++E Sbjct: 814 A-----YRIGQDKPVFVYKLIARGSVEE 836 >gi|258405011|ref|YP_003197753.1| SNF2-like protein [Desulfohalobium retbaense DSM 5692] gi|257797238|gb|ACV68175.1| SNF2-related protein [Desulfohalobium retbaense DSM 5692] Length = 1068 Score = 40.0 bits (92), Expect = 0.18, Method: Compositional matrix adjust. Identities = 23/91 (25%), Positives = 42/91 (46%), Gaps = 6/91 (6%) Query: 105 NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA 164 N IP+ + G GLNL + ++ + WW+ +E R + G + Sbjct: 964 NNPDIPIFLISLKAGGTGLNLT-SADYVIHYDPWWN-----PAVEDQATDRTHRIGQTKK 1017 Query: 165 VFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 VF Y LI +NT++E +L+ K + + ++ Sbjct: 1018 VFSYKLICENTVEEKILKLQEQKKGVAEAII 1048 >gi|322791142|gb|EFZ15704.1| hypothetical protein SINV_11452 [Solenopsis invicta] Length = 843 Score = 40.0 bits (92), Expect = 0.18, Method: Compositional matrix adjust. Identities = 29/92 (31%), Positives = 47/92 (51%), Gaps = 8/92 (8%) Query: 105 NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA 164 + K+ LL A G GLNL G + LV F W+ Q + RI + G KR Sbjct: 645 DNSKVLLLSAKAG--GVGLNLP-GASRLVLFDSDWNPASDMQAMARIW-----RDGQKRN 696 Query: 165 VFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 V++Y L+ TI+E + QR +K+ + + +++ Sbjct: 697 VYIYRLLTTGTIEEKIYQRQISKANLSESVVD 728 >gi|289773131|ref|ZP_06532509.1| helicase [Streptomyces lividans TK24] gi|289703330|gb|EFD70759.1| helicase [Streptomyces lividans TK24] Length = 988 Score = 40.0 bits (92), Expect = 0.18, Method: Composition-based stats. Identities = 25/97 (25%), Positives = 45/97 (46%), Gaps = 6/97 (6%) Query: 101 IQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 ++ + +G P+ + G GLNL ++ V + WW+ +E R + G Sbjct: 874 VRRFQDGDAPVFLLSLKAAGTGLNLTRAEHV-VHYDRWWN-----PAVEAQATDRAYRIG 927 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 R V V+ LIA+ TI++ + L K + D +L + Sbjct: 928 QTRPVQVHRLIAEGTIEDRIAALLNCKRELADAVLGS 964 >gi|256789242|ref|ZP_05527673.1| helicase [Streptomyces lividans TK24] Length = 887 Score = 40.0 bits (92), Expect = 0.18, Method: Composition-based stats. Identities = 25/97 (25%), Positives = 45/97 (46%), Gaps = 6/97 (6%) Query: 101 IQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 ++ + +G P+ + G GLNL ++ V + WW+ +E R + G Sbjct: 773 VRRFQDGDAPVFLLSLKAAGTGLNLTRAEHV-VHYDRWWN-----PAVEAQATDRAYRIG 826 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 R V V+ LIA+ TI++ + L K + D +L + Sbjct: 827 QTRPVQVHRLIAEGTIEDRIAALLNCKRELADAVLGS 863 >gi|227893708|ref|ZP_04011513.1| Snf2 family helicase [Lactobacillus ultunensis DSM 16047] gi|227864568|gb|EEJ71989.1| Snf2 family helicase [Lactobacillus ultunensis DSM 16047] Length = 1180 Score = 40.0 bits (92), Expect = 0.18, Method: Compositional matrix adjust. Identities = 25/96 (26%), Positives = 51/96 (53%), Gaps = 7/96 (7%) Query: 101 IQEWNEGKIPLLF-AHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQA 159 I+E+N + P +F + G G+NL ++++ + WW+L Q +R + Sbjct: 1071 IREFNTMEQPGVFLISLKAGGTGINLT-SADVVIHYDPWWNLAAENQATDR-----AHRI 1124 Query: 160 GFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 G K +V VY ++ +NTI+E +++ + K+ + +L Sbjct: 1125 GQKHSVKVYKMVTKNTIEERIIKLQQKKAELAQAIL 1160 >gi|221124460|ref|XP_002165434.1| PREDICTED: similar to TATA-binding protein-associated factor 172 [Hydra magnipapillata] Length = 562 Score = 40.0 bits (92), Expect = 0.18, Method: Compositional matrix adjust. Identities = 24/96 (25%), Positives = 45/96 (46%), Gaps = 6/96 (6%) Query: 101 IQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 +Q + ++P+L + G GLNL + ++ WW+ +E R + G Sbjct: 425 VQRFQNQEVPVLLVSLKTGGVGLNL-TAADTVIHMDPWWN-----PAVEEQATARAHRIG 478 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + VFVY L+ + +I+E +L+ K + D +L Sbjct: 479 QDQPVFVYKLVVEGSIEERMLELQARKLALSDSVLG 514 >gi|311063653|ref|YP_003970378.1| helicase [Bifidobacterium bifidum PRL2010] gi|310865972|gb|ADP35341.1| Helicase [Bifidobacterium bifidum PRL2010] Length = 1339 Score = 40.0 bits (92), Expect = 0.18, Method: Composition-based stats. Identities = 28/116 (24%), Positives = 52/116 (44%), Gaps = 10/116 (8%) Query: 87 AFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 A P+ R L+ + +N P+ + GLNL G ++V WW+ Q Sbjct: 1217 ATPKKRRLE----LVDRFNADATPVFLISLKAGNTGLNLT-GACVVVHADPWWNAAAQDQ 1271 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKET 202 +R + G + V VY ++A++TI+E +L R+K+ + +++ T Sbjct: 1272 ATDR-----AHRIGQTQDVNVYQIVAKDTIEERILNLQRSKTDLAQRFVDSASSAT 1322 >gi|310286756|ref|YP_003938014.1| helicase [Bifidobacterium bifidum S17] gi|309250692|gb|ADO52440.1| helicase [Bifidobacterium bifidum S17] Length = 1339 Score = 40.0 bits (92), Expect = 0.18, Method: Composition-based stats. Identities = 28/116 (24%), Positives = 52/116 (44%), Gaps = 10/116 (8%) Query: 87 AFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 A P+ R L+ + +N P+ + GLNL G ++V WW+ Q Sbjct: 1217 ATPKKRRLE----LVDRFNADATPVFLISLKAGNTGLNLT-GACVVVHADPWWNAAAQDQ 1271 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKET 202 +R + G + V VY ++A++TI+E +L R+K+ + +++ T Sbjct: 1272 ATDR-----AHRIGQTQDVNVYQIVAKDTIEERILNLQRSKTDLAQRFVDSASSAT 1322 >gi|292630953|sp|B4NXB8|RAD54_DROYA RecName: Full=DNA repair and recombination protein RAD54-like; AltName: Full=Protein okra Length = 784 Score = 40.0 bits (92), Expect = 0.18, Method: Compositional matrix adjust. Identities = 22/77 (28%), Positives = 40/77 (51%), Gaps = 6/77 (7%) Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 G GLNL G N L F W+ +Q + R+ + G K+ ++Y ++A +I+E Sbjct: 580 GCGLNL-IGANRLFMFDPDWNPANDEQAMARVW-----RDGQKKPCYIYRMVASGSIEEK 633 Query: 180 VLQRLRTKSTIQDLLLN 196 +LQR K ++ +++ Sbjct: 634 ILQRQTHKKSLSSTIID 650 >gi|224282308|ref|ZP_03645630.1| helicase [Bifidobacterium bifidum NCIMB 41171] gi|313139453|ref|ZP_07801646.1| conserved hypothetical protein [Bifidobacterium bifidum NCIMB 41171] gi|313131963|gb|EFR49580.1| conserved hypothetical protein [Bifidobacterium bifidum NCIMB 41171] Length = 1339 Score = 40.0 bits (92), Expect = 0.18, Method: Composition-based stats. Identities = 28/116 (24%), Positives = 52/116 (44%), Gaps = 10/116 (8%) Query: 87 AFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 A P+ R L+ + +N P+ + GLNL G ++V WW+ Q Sbjct: 1217 ATPKKRRLE----LVDRFNADATPVFLISLKAGNTGLNLT-GACVVVHADPWWNAAAQDQ 1271 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKET 202 +R + G + V VY ++A++TI+E +L R+K+ + +++ T Sbjct: 1272 ATDR-----AHRIGQTQDVNVYQIVAKDTIEERILNLQRSKTDLAQRFVDSASSAT 1322 >gi|320353039|ref|YP_004194378.1| SNF2-like protein [Desulfobulbus propionicus DSM 2032] gi|320121541|gb|ADW17087.1| SNF2-related protein [Desulfobulbus propionicus DSM 2032] Length = 1447 Score = 40.0 bits (92), Expect = 0.18, Method: Composition-based stats. Identities = 27/97 (27%), Positives = 46/97 (47%), Gaps = 6/97 (6%) Query: 101 IQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 ++ + G+ L + G GLNL + ++ WW+ +E R + G Sbjct: 1338 VEAFQAGQGDLFLISLKAGGLGLNLT-AADYVIHMDPWWN-----PAVEDQASDRAHRIG 1391 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 +R V VY L+AQ TI+E +++ K + D LL+A Sbjct: 1392 QQRPVTVYRLVAQQTIEEKIVRLHAEKRDLADSLLDA 1428 >gi|223936025|ref|ZP_03627939.1| Non-specific serine/threonine protein kinase [bacterium Ellin514] gi|223895247|gb|EEF61694.1| Non-specific serine/threonine protein kinase [bacterium Ellin514] Length = 1046 Score = 40.0 bits (92), Expect = 0.18, Method: Compositional matrix adjust. Identities = 28/105 (26%), Positives = 48/105 (45%), Gaps = 7/105 (6%) Query: 91 GRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 G T D+ + + +IP+ + G GLNL + ++ F WW+ +E Sbjct: 927 GATKDRAQVVERFQRDSRIPVFLISLKAGGTGLNLTG-ADTVIHFDPWWN-----PAVEA 980 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQ-RLRTKSTIQDLL 194 R + G KR V Y LI + T++E +L + R ++ Q +L Sbjct: 981 QATDRAHRIGQKRVVTSYKLITRGTVEEKILNLQTRKRALFQGML 1025 >gi|302655807|ref|XP_003019687.1| hypothetical protein TRV_06277 [Trichophyton verrucosum HKI 0517] gi|291183425|gb|EFE39042.1| hypothetical protein TRV_06277 [Trichophyton verrucosum HKI 0517] Length = 629 Score = 40.0 bits (92), Expect = 0.19, Method: Compositional matrix adjust. Identities = 25/78 (32%), Positives = 39/78 (50%), Gaps = 6/78 (7%) Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 G G+NL G N LV F W+ QQ + R+ + G + FVY IA TI+E Sbjct: 463 GCGINL-VGANRLVLFDPDWNPAADQQALARVW-----RDGQSKDCFVYRFIATGTIEEK 516 Query: 180 VLQRLRTKSTIQDLLLNA 197 + QR K ++ ++++ Sbjct: 517 IFQRQSHKQSLSSCVVDS 534 >gi|296327606|ref|ZP_06870151.1| SWF/SNF family helicase [Fusobacterium nucleatum subsp. nucleatum ATCC 23726] gi|296155280|gb|EFG96052.1| SWF/SNF family helicase [Fusobacterium nucleatum subsp. nucleatum ATCC 23726] Length = 899 Score = 40.0 bits (92), Expect = 0.19, Method: Composition-based stats. Identities = 28/106 (26%), Positives = 50/106 (47%), Gaps = 6/106 (5%) Query: 91 GRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 G+T D+ + N+ + + + G GLNL I ++ WW+ Q I+R Sbjct: 780 GQTKDRQNLVDKFQNDSRYKVFVMTLKTGGVGLNLVSADTIFIY-DPWWNTTVENQAIDR 838 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + G + VF Y +I +NTI+E +L+ K+ + D L++ Sbjct: 839 -----AYRLGQDKTVFAYKMIMRNTIEEKILKLQEIKNKLLDDLIS 879 >gi|237745383|ref|ZP_04575864.1| SWF/SNF family helicase [Fusobacterium sp. 7_1] gi|229432612|gb|EEO42824.1| SWF/SNF family helicase [Fusobacterium sp. 7_1] Length = 899 Score = 40.0 bits (92), Expect = 0.19, Method: Composition-based stats. Identities = 28/106 (26%), Positives = 50/106 (47%), Gaps = 6/106 (5%) Query: 91 GRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 G+T D+ + N+ + + + G GLNL I ++ WW+ Q I+R Sbjct: 780 GQTKDRQNLVDKFQNDSRYKVFVMTLKTGGVGLNLVSADTIFIY-DPWWNTTVENQAIDR 838 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + G + VF Y +I +NTI+E +L+ K+ + D L++ Sbjct: 839 -----AYRLGQDKTVFAYKMIMRNTIEEKILKLQEIKNKLLDDLIS 879 >gi|168012021|ref|XP_001758701.1| SNF2 family DNA-dependent ATPase [Physcomitrella patens subsp. patens] gi|162690311|gb|EDQ76679.1| SNF2 family DNA-dependent ATPase [Physcomitrella patens subsp. patens] Length = 1220 Score = 40.0 bits (92), Expect = 0.19, Method: Compositional matrix adjust. Identities = 22/87 (25%), Positives = 45/87 (51%), Gaps = 6/87 (6%) Query: 118 SCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 + G G+NL ++++ S W + Q M R + G + V ++ L+ + TI+ Sbjct: 696 AGGLGINLATADTVIIYDSDWNPHADLQAM------ARAHRLGQQNKVMIFRLVTRGTIE 749 Query: 178 ELVLQRLRTKSTIQDLLLNALKKETIH 204 E ++Q + K ++ L++ +KKE I+ Sbjct: 750 ERMMQMTKKKMVLEHLVVGRMKKENIN 776 >gi|320103193|ref|YP_004178784.1| SNF2-like protein [Isosphaera pallida ATCC 43644] gi|319750475|gb|ADV62235.1| SNF2-related protein [Isosphaera pallida ATCC 43644] Length = 1912 Score = 40.0 bits (92), Expect = 0.19, Method: Composition-based stats. Identities = 23/91 (25%), Positives = 42/91 (46%), Gaps = 6/91 (6%) Query: 105 NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA 164 N+ +P+ + G GLNL + WW+ Q I+R + G Sbjct: 1808 NDPNVPVFLISLKAGGLGLNLT-AAEYVYLLDPWWNPAVEAQAIDR-----SHRIGQTSH 1861 Query: 165 VFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 VF Y LI ++T+++ +++ +TK + D +L Sbjct: 1862 VFAYRLICRDTVEQKIIELQKTKRALADAIL 1892 >gi|256028234|ref|ZP_05442068.1| SWF/SNF family helicase [Fusobacterium sp. D11] gi|289766166|ref|ZP_06525544.1| SWF/SNF family helicase [Fusobacterium sp. D11] gi|289717721|gb|EFD81733.1| SWF/SNF family helicase [Fusobacterium sp. D11] Length = 899 Score = 40.0 bits (92), Expect = 0.19, Method: Composition-based stats. Identities = 28/106 (26%), Positives = 50/106 (47%), Gaps = 6/106 (5%) Query: 91 GRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 G+T D+ + N+ + + + G GLNL I ++ WW+ Q I+R Sbjct: 780 GQTKDRQNLVDKFQNDSRYKVFVMTLKTGGVGLNLVSADTIFIY-DPWWNTTVENQAIDR 838 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + G + VF Y +I +NTI+E +L+ K+ + D L++ Sbjct: 839 -----AYRLGQDKTVFAYKMIMRNTIEEKILKLQEIKNKLLDDLIS 879 >gi|239918579|ref|YP_002958137.1| DNA/RNA helicase, superfamily II, SNF2 family [Micrococcus luteus NCTC 2665] gi|239839786|gb|ACS31583.1| DNA/RNA helicase, superfamily II, SNF2 family [Micrococcus luteus NCTC 2665] Length = 1143 Score = 40.0 bits (92), Expect = 0.19, Method: Composition-based stats. Identities = 27/103 (26%), Positives = 48/103 (46%), Gaps = 7/103 (6%) Query: 80 DLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWW 139 D ++ A+ G T + I+ + EG+ P+ + G GL L + + WW Sbjct: 1007 DHLEIEHAYLDGSTRGRAD-VIRGFREGEAPVFLISLKAGGFGLTLTEADYVFLM-DPWW 1064 Query: 140 DLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQ 182 + Q ++R + G +R V VY L+++ TI+E VL+ Sbjct: 1065 NPAAEAQAVDR-----AHRIGQERTVMVYRLVSEGTIEEKVLE 1102 >gi|151943650|gb|EDN61960.1| radiation sensitive protein [Saccharomyces cerevisiae YJM789] Length = 898 Score = 40.0 bits (92), Expect = 0.19, Method: Compositional matrix adjust. Identities = 25/92 (27%), Positives = 44/92 (47%), Gaps = 6/92 (6%) Query: 106 EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 EG+ + + G G+NL G N L+ W+ QQ + R+ + G K+ Sbjct: 722 EGQEFIFLLSSKAGGCGINL-IGANRLILMDPDWNPAADQQALARVW-----RDGQKKDC 775 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 F+Y I+ TI+E + QR K ++ +++A Sbjct: 776 FIYRFISTGTIEEKIFQRQSMKMSLSSCVVDA 807 >gi|326427315|gb|EGD72885.1| hypothetical protein PTSG_12193 [Salpingoeca sp. ATCC 50818] Length = 2049 Score = 40.0 bits (92), Expect = 0.19, Method: Composition-based stats. Identities = 22/81 (27%), Positives = 41/81 (50%), Gaps = 6/81 (7%) Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 G G+NL + ++ S W ++Q + R + G KR V VY L+A+ T+DE Sbjct: 1489 GLGINLNTADTVFIYDSDWNPHMDNQ------AIARAHRIGQKRLVMVYRLVAKGTVDEK 1542 Query: 180 VLQRLRTKSTIQDLLLNALKK 200 ++++ R K + + ++ K Sbjct: 1543 IVEQARKKLALDEAVVEQKHK 1563 >gi|312959636|ref|ZP_07774153.1| SNF2-like protein [Pseudomonas fluorescens WH6] gi|311286353|gb|EFQ64917.1| SNF2-like protein [Pseudomonas fluorescens WH6] Length = 896 Score = 40.0 bits (92), Expect = 0.19, Method: Compositional matrix adjust. Identities = 27/111 (24%), Positives = 53/111 (47%), Gaps = 7/111 (6%) Query: 87 AFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 A G+T D+ ++++ GK+ + + G GLNL + + + WW+ Q Sbjct: 766 ALLTGQTRDRR-TPVKDFQSGKLQIFLISLKAGGVGLNLTEADTV-IHYDPWWNPATENQ 823 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + R + G ++ VFVY +IA+ T++E + + KS + +L+ Sbjct: 824 ATD-----RAYRIGQEKPVFVYKMIARGTVEEKIQHLQKEKSDLAAGVLDG 869 >gi|256272233|gb|EEU07224.1| Rad54p [Saccharomyces cerevisiae JAY291] gi|259146347|emb|CAY79604.1| Rad54p [Saccharomyces cerevisiae EC1118] Length = 898 Score = 40.0 bits (92), Expect = 0.19, Method: Compositional matrix adjust. Identities = 25/92 (27%), Positives = 44/92 (47%), Gaps = 6/92 (6%) Query: 106 EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 EG+ + + G G+NL G N L+ W+ QQ + R+ + G K+ Sbjct: 722 EGQEFIFLLSSKAGGCGINL-IGANRLILMDPDWNPAADQQALARVW-----RDGQKKDC 775 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 F+Y I+ TI+E + QR K ++ +++A Sbjct: 776 FIYRFISTGTIEEKIFQRQSMKMSLSSCVVDA 807 >gi|302879469|ref|YP_003848033.1| SNF2-related protein [Gallionella capsiferriformans ES-2] gi|302582258|gb|ADL56269.1| SNF2-related protein [Gallionella capsiferriformans ES-2] Length = 1100 Score = 40.0 bits (92), Expect = 0.19, Method: Compositional matrix adjust. Identities = 20/82 (24%), Positives = 41/82 (50%), Gaps = 6/82 (7%) Query: 100 TIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQA 159 ++++ +G++P+ + G GLNL + ++ + WW+ +E R + Sbjct: 983 VVRQFQDGEVPIFLISLKAGGVGLNLT-SADTVIHYDPWWN-----PAVENQATDRAHRL 1036 Query: 160 GFKRAVFVYYLIAQNTIDELVL 181 G + VFVY L+ +I+E +L Sbjct: 1037 GQTKNVFVYKLVVAGSIEEKIL 1058 >gi|229589086|ref|YP_002871205.1| putative helicase [Pseudomonas fluorescens SBW25] gi|229360952|emb|CAY47812.1| putative helicase [Pseudomonas fluorescens SBW25] Length = 897 Score = 40.0 bits (92), Expect = 0.19, Method: Compositional matrix adjust. Identities = 27/111 (24%), Positives = 53/111 (47%), Gaps = 7/111 (6%) Query: 87 AFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 A G+T D+ ++++ GK+ + + G GLNL + + + WW+ Q Sbjct: 767 ALLTGQTRDRR-TPVKDFQSGKLQIFLISLKAGGVGLNLTEADTV-IHYDPWWNPATENQ 824 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + R + G ++ VFVY +IA+ T++E + + KS + +L+ Sbjct: 825 ATD-----RAYRIGQEKPVFVYKMIARGTVEEKIQHLQKEKSDLAAGVLDG 870 >gi|190407107|gb|EDV10374.1| DNA repair and recombination protein RAD54 [Saccharomyces cerevisiae RM11-1a] Length = 898 Score = 40.0 bits (92), Expect = 0.19, Method: Compositional matrix adjust. Identities = 25/92 (27%), Positives = 44/92 (47%), Gaps = 6/92 (6%) Query: 106 EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 EG+ + + G G+NL G N L+ W+ QQ + R+ + G K+ Sbjct: 722 EGQEFIFLLSSKAGGCGINL-IGANRLILMDPDWNPAADQQALARVW-----RDGQKKDC 775 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 F+Y I+ TI+E + QR K ++ +++A Sbjct: 776 FIYRFISTGTIEEKIFQRQSMKMSLSSCVVDA 807 >gi|309774808|ref|ZP_07669829.1| Snf2 family protein [Erysipelotrichaceae bacterium 3_1_53] gi|308917366|gb|EFP63085.1| Snf2 family protein [Erysipelotrichaceae bacterium 3_1_53] Length = 520 Score = 40.0 bits (92), Expect = 0.19, Method: Compositional matrix adjust. Identities = 24/95 (25%), Positives = 42/95 (44%), Gaps = 6/95 (6%) Query: 101 IQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 + +N P+ + G GLNL +++ F WW++ Q R + G Sbjct: 413 VNSFNSDDTPVFLISLKAGGTGLNLT-SAEVVIHFDPWWNVSAQNQ-----ATDRAYRIG 466 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 V V LIA++TI+E ++Q K + D ++ Sbjct: 467 QHNNVQVVKLIAKDTIEEKIMQLQSLKQDLSDSII 501 >gi|260495666|ref|ZP_05815790.1| SWF/SNF family helicase [Fusobacterium sp. 3_1_33] gi|260196849|gb|EEW94372.1| SWF/SNF family helicase [Fusobacterium sp. 3_1_33] Length = 899 Score = 40.0 bits (92), Expect = 0.19, Method: Composition-based stats. Identities = 28/106 (26%), Positives = 50/106 (47%), Gaps = 6/106 (5%) Query: 91 GRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 G+T D+ + N+ + + + G GLNL I ++ WW+ Q I+R Sbjct: 780 GQTKDRQNLVDKFQNDSRYKVFVMTLKTGGVGLNLVSADTIFIY-DPWWNTTVENQAIDR 838 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + G + VF Y +I +NTI+E +L+ K+ + D L++ Sbjct: 839 -----AYRLGQDKTVFAYKMIMRNTIEEKILKLQEIKNKLLDDLIS 879 >gi|50547625|ref|XP_501282.1| YALI0C00363p [Yarrowia lipolytica] gi|49647149|emb|CAG81577.1| YALI0C00363p [Yarrowia lipolytica] Length = 1320 Score = 40.0 bits (92), Expect = 0.19, Method: Compositional matrix adjust. Identities = 22/74 (29%), Positives = 38/74 (51%), Gaps = 6/74 (8%) Query: 118 SCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 + G G+NL +++F S W + Q M R + G K V VY ++++T++ Sbjct: 692 AGGLGINLMTADTVIIFDSDWNPQADLQAM------ARAHRIGQKNHVMVYRFVSKDTVE 745 Query: 178 ELVLQRLRTKSTIQ 191 E VL+R R K ++ Sbjct: 746 EQVLERARKKMILE 759 >gi|19111970|ref|NP_595178.1| ATP-dependent DNA helicase Rhp16b (predicted) [Schizosaccharomyces pombe 972h-] gi|1723497|sp|Q10332|YBMA_SCHPO RecName: Full=Uncharacterized ATP-dependent helicase C582.10c gi|5420446|emb|CAB46673.1| ATP-dependent DNA helicase Rhp16b (predicted) [Schizosaccharomyces pombe] Length = 830 Score = 40.0 bits (92), Expect = 0.19, Method: Compositional matrix adjust. Identities = 21/65 (32%), Positives = 36/65 (55%), Gaps = 7/65 (10%) Query: 119 CGH-GLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 CG GLNL + + +WW+ +Q I+R+ + G +R V VY L+ +NTI+ Sbjct: 731 CGALGLNLTCASRV-ILCDVWWNPAIEEQAIDRV-----HRIGQRRDVLVYKLVVENTIE 784 Query: 178 ELVLQ 182 E +++ Sbjct: 785 EKIVE 789 >gi|166240364|ref|XP_638342.2| SNF2-related domain-containing protein [Dictyostelium discoideum AX4] gi|165988561|gb|EAL64859.2| SNF2-related domain-containing protein [Dictyostelium discoideum AX4] Length = 1604 Score = 40.0 bits (92), Expect = 0.20, Method: Compositional matrix adjust. Identities = 33/104 (31%), Positives = 49/104 (47%), Gaps = 18/104 (17%) Query: 101 IQEWNEGKIP----LLFAHPASCGHGLNLQYGGNILVFFSLW---WDLEEHQQMIERIGV 153 + EWN P +L H + G G+NLQ +++F S W DL+ Q RIG Sbjct: 997 VVEWNRPDSPFWIFVLSTH--AGGLGMNLQTADTVIIFDSDWNPQMDLQA-QDRCHRIGQ 1053 Query: 154 TRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 T +V V+ LI+ N+I+E +L R K I ++ A Sbjct: 1054 T--------NSVSVFRLISANSIEEKILGRATDKLEIDAKIIQA 1089 >gi|32141133|ref|NP_733524.1| helicase [Streptomyces coelicolor A3(2)] gi|24413742|emb|CAD55164.1| putative helicase [Streptomyces coelicolor A3(2)] Length = 890 Score = 40.0 bits (92), Expect = 0.20, Method: Composition-based stats. Identities = 25/97 (25%), Positives = 45/97 (46%), Gaps = 6/97 (6%) Query: 101 IQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 ++ + +G P+ + G GLNL ++ V + WW+ +E R + G Sbjct: 776 VRRFQDGDAPVFLLSLKAAGTGLNLTRAEHV-VHYDRWWN-----PAVEAQATDRAYRIG 829 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 R V V+ LIA+ TI++ + L K + D +L + Sbjct: 830 QTRPVQVHRLIAEGTIEDRIAALLNRKRELADAVLGS 866 >gi|84495493|ref|ZP_00994612.1| SNF2-like [Janibacter sp. HTCC2649] gi|84384986|gb|EAQ00866.1| SNF2-like [Janibacter sp. HTCC2649] Length = 1099 Score = 40.0 bits (92), Expect = 0.20, Method: Composition-based stats. Identities = 38/173 (21%), Positives = 66/173 (38%), Gaps = 20/173 (11%) Query: 9 RELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANA 68 R++ D + EA+ + + K L E H V + L ++ ++ Sbjct: 912 RQMALDPSLVDAEAYGGVAPSAKVEALVEQVAELAAEGHRALVFSQFTSFLSIVRDRLEE 971 Query: 69 APIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYG 128 I AY S R ++E+ EG+ P+ + G GL L Sbjct: 972 EGIAYAYLDGSTRNRAD--------------VVKEFREGEAPVFLISLKAGGFGLTLTEA 1017 Query: 129 GNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVL 181 + V WW+ Q I+ R + G ++V VY L++ +TI+E V+ Sbjct: 1018 DYVFV-LDPWWNPAAENQAID-----RAHRIGQTKSVNVYRLVSTDTIEEKVV 1064 >gi|304389525|ref|ZP_07371488.1| conserved hypothetical protein [Mobiluncus curtisii subsp. curtisii ATCC 35241] gi|304327335|gb|EFL94570.1| conserved hypothetical protein [Mobiluncus curtisii subsp. curtisii ATCC 35241] Length = 988 Score = 40.0 bits (92), Expect = 0.20, Method: Composition-based stats. Identities = 28/103 (27%), Positives = 49/103 (47%), Gaps = 7/103 (6%) Query: 80 DLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWW 139 D A + A+ G + D+D + + G++ + + G GLNL + + WW Sbjct: 858 DQAGIDYAYLDGTSRDRDR-QVARFQNGEVDVFLISLKAGGFGLNLTQADYVFLT-DPWW 915 Query: 140 DLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQ 182 + Q ++R + G KR V VY L+A +TI++ VL+ Sbjct: 916 NPAAEAQAVDR-----AHRLGQKRFVNVYRLVATDTIEQRVLE 953 >gi|19704721|ref|NP_604283.1| SWF/SNF family helicase [Fusobacterium nucleatum subsp. nucleatum ATCC 25586] gi|19715039|gb|AAL95582.1| SWF/SNF family helicase [Fusobacterium nucleatum subsp. nucleatum ATCC 25586] Length = 892 Score = 40.0 bits (92), Expect = 0.20, Method: Composition-based stats. Identities = 28/106 (26%), Positives = 50/106 (47%), Gaps = 6/106 (5%) Query: 91 GRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 G+T D+ + N+ + + + G GLNL I ++ WW+ Q I+R Sbjct: 773 GQTKDRQNLVDKFQNDSRYKVFVMTLKTGGVGLNLVSADTIFIY-DPWWNTTVENQAIDR 831 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + G + VF Y +I +NTI+E +L+ K+ + D L++ Sbjct: 832 -----AYRLGQDKTVFAYKMIMRNTIEEKILKLQEIKNKLLDDLIS 872 >gi|6321275|ref|NP_011352.1| Rad54p [Saccharomyces cerevisiae S288c] gi|417577|sp|P32863|RAD54_YEAST RecName: Full=DNA repair and recombination protein RAD54 gi|172343|gb|AAA34949.1| recombination and repair protein [Saccharomyces cerevisiae] gi|728692|emb|CAA88534.1| RAD54 [Saccharomyces cerevisiae] gi|1322760|emb|CAA96875.1| RAD54 [Saccharomyces cerevisiae] gi|285812049|tpg|DAA07949.1| TPA: Rad54p [Saccharomyces cerevisiae S288c] Length = 898 Score = 40.0 bits (92), Expect = 0.20, Method: Compositional matrix adjust. Identities = 25/92 (27%), Positives = 44/92 (47%), Gaps = 6/92 (6%) Query: 106 EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 EG+ + + G G+NL G N L+ W+ QQ + R+ + G K+ Sbjct: 722 EGQEFIFLLSSKAGGCGINL-IGANRLILMDPDWNPAADQQALARVW-----RDGQKKDC 775 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 F+Y I+ TI+E + QR K ++ +++A Sbjct: 776 FIYRFISTGTIEEKIFQRQSMKMSLSSCVVDA 807 >gi|325279022|ref|YP_004251564.1| SNF2-related protein [Odoribacter splanchnicus DSM 20712] gi|324310831|gb|ADY31384.1| SNF2-related protein [Odoribacter splanchnicus DSM 20712] Length = 994 Score = 40.0 bits (92), Expect = 0.20, Method: Compositional matrix adjust. Identities = 25/80 (31%), Positives = 38/80 (47%), Gaps = 6/80 (7%) Query: 118 SCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 + G GLNL + + WW++ Q V+R + G KRAVFVY I T++ Sbjct: 906 AGGVGLNLTEADYVFIL-DPWWNVAAENQ-----AVSRAHRIGQKRAVFVYRFITAGTLE 959 Query: 178 ELVLQRLRTKSTIQDLLLNA 197 E +L K + D ++ A Sbjct: 960 EKILAIQERKQRLADSVITA 979 >gi|298346771|ref|YP_003719458.1| helicase [Mobiluncus curtisii ATCC 43063] gi|298236832|gb|ADI67964.1| helicase [Mobiluncus curtisii ATCC 43063] Length = 988 Score = 40.0 bits (92), Expect = 0.20, Method: Composition-based stats. Identities = 28/103 (27%), Positives = 49/103 (47%), Gaps = 7/103 (6%) Query: 80 DLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWW 139 D A + A+ G + D+D + + G++ + + G GLNL + + WW Sbjct: 858 DQAGIDYAYLDGTSRDRDR-QVARFQNGEVDVFLISLKAGGFGLNLTQADYVFLT-DPWW 915 Query: 140 DLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQ 182 + Q ++R + G KR V VY L+A +TI++ VL+ Sbjct: 916 NPAAEAQAVDR-----AHRLGQKRFVNVYRLVATDTIEQRVLE 953 >gi|29826907|ref|NP_821541.1| SNF2/RAD54 family helicase [Streptomyces avermitilis MA-4680] gi|29604004|dbj|BAC68076.1| putative SNF2/RAD54 family helicase [Streptomyces avermitilis MA-4680] Length = 950 Score = 40.0 bits (92), Expect = 0.20, Method: Composition-based stats. Identities = 23/97 (23%), Positives = 46/97 (47%), Gaps = 6/97 (6%) Query: 101 IQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 + + G++P+ + G GLNL ++ V + WW+ +E R + G Sbjct: 837 VDRFQRGEVPVFLLSLKAAGTGLNLTRATHV-VHYDRWWN-----PAVEDQATDRAYRIG 890 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + V V+ LIA+ T+++ V + L K + D ++ + Sbjct: 891 QDKPVQVHKLIAEGTVEDKVAKLLEAKRALADAVVGS 927 >gi|83646526|ref|YP_434961.1| SNF2 family DNA/RNA helicase [Hahella chejuensis KCTC 2396] gi|83634569|gb|ABC30536.1| Superfamily II DNA/RNA helicase, SNF2 family [Hahella chejuensis KCTC 2396] Length = 947 Score = 40.0 bits (92), Expect = 0.20, Method: Compositional matrix adjust. Identities = 51/166 (30%), Positives = 74/166 (44%), Gaps = 22/166 (13%) Query: 46 KHWKEVHDEKIKALEVIIEKA---NAAPIIVAYHFNSD--LA-RLQKAFPQGR----TLD 95 KH K +D K++ L+ II+ P+I + + LA L AFPQ T D Sbjct: 456 KHLKSGNDPKLQTLKQIIKPVLDEGYNPVIFCRYIATAEYLADELNSAFPQREVIHVTGD 515 Query: 96 KDPC----TIQEWNEG-KIPLLFAHPASC-GHGLNLQYGGNILVFFSLWWDLEEHQQMIE 149 P I++ E K PLL A C G+NLQ N ++ + L W+ H+Q Sbjct: 516 LTPTERLERIEQLKESDKAPLLVA--TDCLSEGVNLQEQFNAVIHYDLSWNPTRHEQREG 573 Query: 150 RIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQR-LRTKSTIQDLL 194 R+ Q+ K +YY +N +D VLQ LR +I+ L Sbjct: 574 RVDRFGQKAKNVK--ALMYY-GEENPVDGAVLQVILRKAESIRKAL 616 >gi|324507205|gb|ADY43057.1| DNA repair and recombination protein RAD54-like protein [Ascaris suum] Length = 755 Score = 40.0 bits (92), Expect = 0.20, Method: Compositional matrix adjust. Identities = 26/77 (33%), Positives = 38/77 (49%), Gaps = 6/77 (7%) Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 G GLNL G N LV F W+ Q + RI + G K+ F+Y L+A TI+E Sbjct: 589 GCGLNL-IGANRLVMFDPDWNPANDDQAMARIW-----RDGQKKHCFIYRLLATGTIEEK 642 Query: 180 VLQRLRTKSTIQDLLLN 196 + QR K + +++ Sbjct: 643 MFQRQTHKKALSSCVVD 659 >gi|297742194|emb|CBI33981.3| unnamed protein product [Vitis vinifera] Length = 554 Score = 40.0 bits (92), Expect = 0.20, Method: Compositional matrix adjust. Identities = 29/157 (18%), Positives = 72/157 (45%), Gaps = 8/157 (5%) Query: 48 WKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNE- 106 + E +EK+ ++ + YHF+ + + R + + +I +N+ Sbjct: 355 FSETMNEKVLVFSQFLDPLTYLMDQLKYHFHWIVGKEVLYMDGQRDVKQRQSSINTFNDP 414 Query: 107 -GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 ++ +L A +C G++L G + ++ + W+ +ER ++R + G ++ V Sbjct: 415 ASQVRVLLASTKACSEGISL-VGASRVILLDVVWN-----PSVERQAISRAYRLGQRKVV 468 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKET 202 ++Y+L+ T++E R K + +L+ ++ K + Sbjct: 469 YIYHLLTSGTMEEEKYCRQAKKDRLSELVFSSKDKTS 505 >gi|50306047|ref|XP_452985.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140] gi|49642118|emb|CAH01836.1| KLLA0C17578p [Kluyveromyces lactis] Length = 1525 Score = 40.0 bits (92), Expect = 0.20, Method: Compositional matrix adjust. Identities = 22/70 (31%), Positives = 36/70 (51%), Gaps = 6/70 (8%) Query: 118 SCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 + G G+NL +++F S W + Q M R + G K V VY ++++T++ Sbjct: 785 AGGLGINLMTADTVIIFDSDWNPQADLQAM------ARAHRIGQKNHVMVYRFVSKDTVE 838 Query: 178 ELVLQRLRTK 187 E VL+R R K Sbjct: 839 EEVLERARKK 848 >gi|315656771|ref|ZP_07909658.1| conserved hypothetical protein [Mobiluncus curtisii subsp. holmesii ATCC 35242] gi|315492726|gb|EFU82330.1| conserved hypothetical protein [Mobiluncus curtisii subsp. holmesii ATCC 35242] Length = 988 Score = 40.0 bits (92), Expect = 0.20, Method: Composition-based stats. Identities = 28/103 (27%), Positives = 49/103 (47%), Gaps = 7/103 (6%) Query: 80 DLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWW 139 D A + A+ G + D+D + + G++ + + G GLNL + + WW Sbjct: 858 DQAGIDYAYLDGTSRDRDR-QVARFQNGEVDVFLISLKAGGFGLNLTQADYVFLT-DPWW 915 Query: 140 DLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQ 182 + Q ++R + G KR V VY L+A +TI++ VL+ Sbjct: 916 NPAAEAQAVDR-----AHRLGQKRFVNVYRLVATDTIEQRVLE 953 >gi|312383263|gb|EFR28419.1| hypothetical protein AND_03670 [Anopheles darlingi] Length = 814 Score = 40.0 bits (92), Expect = 0.20, Method: Compositional matrix adjust. Identities = 24/77 (31%), Positives = 39/77 (50%), Gaps = 6/77 (7%) Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 G GLNL G N LV F W+ +Q + R+ + G K+ F+Y L+A +I+E Sbjct: 592 GCGLNL-IGANRLVMFDPDWNPANDEQAMARVW-----RDGQKKPCFIYRLLATGSIEEK 645 Query: 180 VLQRLRTKSTIQDLLLN 196 + QR K + +++ Sbjct: 646 IFQRQTHKKALSTTVVD 662 >gi|255718763|ref|XP_002555662.1| KLTH0G14498p [Lachancea thermotolerans] gi|238937046|emb|CAR25225.1| KLTH0G14498p [Lachancea thermotolerans] Length = 1436 Score = 40.0 bits (92), Expect = 0.20, Method: Compositional matrix adjust. Identities = 22/74 (29%), Positives = 38/74 (51%), Gaps = 6/74 (8%) Query: 118 SCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 + G G+NL +++F S W + Q M R + G K V VY ++++T++ Sbjct: 754 AGGLGINLMTADTVIIFDSDWNPQADLQAM------ARAHRIGQKNHVMVYRFVSKDTVE 807 Query: 178 ELVLQRLRTKSTIQ 191 E VL+R R K ++ Sbjct: 808 EEVLERARKKMILE 821 >gi|195470937|ref|XP_002087763.1| GE14966 [Drosophila yakuba] gi|194173864|gb|EDW87475.1| GE14966 [Drosophila yakuba] Length = 772 Score = 40.0 bits (92), Expect = 0.21, Method: Compositional matrix adjust. Identities = 22/77 (28%), Positives = 40/77 (51%), Gaps = 6/77 (7%) Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 G GLNL G N L F W+ +Q + R+ + G K+ ++Y ++A +I+E Sbjct: 568 GCGLNL-IGANRLFMFDPDWNPANDEQAMARVW-----RDGQKKPCYIYRMVASGSIEEK 621 Query: 180 VLQRLRTKSTIQDLLLN 196 +LQR K ++ +++ Sbjct: 622 ILQRQTHKKSLSSTIID 638 >gi|325095596|gb|EGC48906.1| transcription factor [Ajellomyces capsulatus H88] Length = 929 Score = 40.0 bits (92), Expect = 0.21, Method: Compositional matrix adjust. Identities = 25/86 (29%), Positives = 40/86 (46%), Gaps = 6/86 (6%) Query: 105 NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA 164 N+ +L A C GLNL N ++ WW IE V R + G KR Sbjct: 822 NDSNCTVLLASLNVCSVGLNL-VAANQVILADSWW-----APAIEDQAVDRVYRLGQKRP 875 Query: 165 VFVYYLIAQNTIDELVLQRLRTKSTI 190 ++ L+ +N+I++ VL + + K T+ Sbjct: 876 TTIWRLVMENSIEDRVLDKQKEKRTL 901 >gi|308499699|ref|XP_003112035.1| CRE-RAD-54 protein [Caenorhabditis remanei] gi|308268516|gb|EFP12469.1| CRE-RAD-54 protein [Caenorhabditis remanei] Length = 1096 Score = 40.0 bits (92), Expect = 0.21, Method: Compositional matrix adjust. Identities = 24/77 (31%), Positives = 38/77 (49%), Gaps = 6/77 (7%) Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 G GLNL G N LV F W+ Q + R+ + G K+ F+Y L+A +I+E Sbjct: 903 GCGLNL-IGANRLVMFDPDWNPANDDQAMARVW-----RDGQKKTCFIYRLLATGSIEEK 956 Query: 180 VLQRLRTKSTIQDLLLN 196 + QR K + +++ Sbjct: 957 MFQRQTHKKALSSCVVS 973 >gi|262377834|ref|ZP_06071049.1| predicted protein [Acinetobacter lwoffii SH145] gi|262307224|gb|EEY88372.1| predicted protein [Acinetobacter lwoffii SH145] Length = 1115 Score = 40.0 bits (92), Expect = 0.21, Method: Compositional matrix adjust. Identities = 26/107 (24%), Positives = 50/107 (46%), Gaps = 7/107 (6%) Query: 91 GRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 G+T +D I + G++P+ + G GLNL + ++ + WW+ Q +R Sbjct: 996 GKTKKRDEV-ITAFQSGQVPVFLISLKAGGVGLNLT-AADTVIHYDPWWNPAAEDQASDR 1053 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + G + VFVY LI +I+E ++ + K+ + +L+ Sbjct: 1054 AW-----RIGQDKPVFVYKLITNKSIEEKIIALQQNKAELAQSILST 1095 >gi|320581684|gb|EFW95903.1| Nucleosome remodeling factor [Pichia angusta DL-1] Length = 1384 Score = 40.0 bits (92), Expect = 0.21, Method: Compositional matrix adjust. Identities = 22/74 (29%), Positives = 38/74 (51%), Gaps = 6/74 (8%) Query: 118 SCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 + G G+NL +++F S W + Q M R + G K V VY ++++T++ Sbjct: 753 AGGLGINLMTADTVIIFDSDWNPQADLQAM------ARAHRIGQKNHVMVYRFVSKDTVE 806 Query: 178 ELVLQRLRTKSTIQ 191 E VL+R R K ++ Sbjct: 807 EQVLERARRKMILE 820 >gi|149244356|ref|XP_001526721.1| chromo domain protein 1 [Lodderomyces elongisporus NRRL YB-4239] gi|146449115|gb|EDK43371.1| chromo domain protein 1 [Lodderomyces elongisporus NRRL YB-4239] Length = 1500 Score = 40.0 bits (92), Expect = 0.21, Method: Compositional matrix adjust. Identities = 21/74 (28%), Positives = 38/74 (51%), Gaps = 6/74 (8%) Query: 118 SCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 + G G+NL +++F S W + Q M R + G K V VY ++++T++ Sbjct: 806 AGGLGINLMTADTVIIFDSDWNPQADLQAM------ARAHRIGQKNQVLVYRFVSKDTVE 859 Query: 178 ELVLQRLRTKSTIQ 191 E +L+R R K ++ Sbjct: 860 EQILERARKKMILE 873 >gi|283851358|ref|ZP_06368640.1| SNF2-related protein [Desulfovibrio sp. FW1012B] gi|283573308|gb|EFC21286.1| SNF2-related protein [Desulfovibrio sp. FW1012B] Length = 1072 Score = 40.0 bits (92), Expect = 0.21, Method: Compositional matrix adjust. Identities = 22/78 (28%), Positives = 39/78 (50%), Gaps = 6/78 (7%) Query: 118 SCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 + G GLNL + ++ + WW+ +E R + G KR VF Y +I QNT++ Sbjct: 981 AGGTGLNLT-SADYVIHYDPWWN-----PAVENQATDRTHRIGQKRQVFSYKMICQNTVE 1034 Query: 178 ELVLQRLRTKSTIQDLLL 195 E +L+ K + + ++ Sbjct: 1035 EKILKLQEQKKDVAEAII 1052 >gi|315655316|ref|ZP_07908216.1| conserved hypothetical protein [Mobiluncus curtisii ATCC 51333] gi|315490256|gb|EFU79881.1| conserved hypothetical protein [Mobiluncus curtisii ATCC 51333] Length = 988 Score = 40.0 bits (92), Expect = 0.21, Method: Composition-based stats. Identities = 28/103 (27%), Positives = 49/103 (47%), Gaps = 7/103 (6%) Query: 80 DLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWW 139 D A + A+ G + D+D + + G++ + + G GLNL + + WW Sbjct: 858 DQAGIDYAYLDGTSRDRDR-QVARFQNGEVDVFLISLKAGGFGLNLTQADYVFLT-DPWW 915 Query: 140 DLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQ 182 + Q ++R + G KR V VY L+A +TI++ VL+ Sbjct: 916 NPAAEAQAVDR-----AHRLGQKRFVNVYRLVATDTIEQRVLE 953 >gi|302792356|ref|XP_002977944.1| hypothetical protein SELMODRAFT_408 [Selaginella moellendorffii] gi|300154647|gb|EFJ21282.1| hypothetical protein SELMODRAFT_408 [Selaginella moellendorffii] Length = 835 Score = 40.0 bits (92), Expect = 0.21, Method: Compositional matrix adjust. Identities = 21/65 (32%), Positives = 35/65 (53%), Gaps = 6/65 (9%) Query: 118 SCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 + G GLNL N+ V WW+ +Q ++R+ + G R V V+ L+A ++I+ Sbjct: 763 AAGVGLNLVSASNV-VMLDPWWNPAAEEQAMDRV-----HRLGQTRDVHVFRLVATDSIE 816 Query: 178 ELVLQ 182 E +LQ Sbjct: 817 ERLLQ 821 >gi|294786039|ref|ZP_06751326.1| Snf2 family protein [Fusobacterium sp. 3_1_27] gi|294486376|gb|EFG33739.1| Snf2 family protein [Fusobacterium sp. 3_1_27] Length = 899 Score = 40.0 bits (92), Expect = 0.22, Method: Composition-based stats. Identities = 28/106 (26%), Positives = 50/106 (47%), Gaps = 6/106 (5%) Query: 91 GRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 G+T D+ + N+ + + + G GLNL I ++ WW+ Q I+R Sbjct: 780 GQTKDRQNLVDKFQNDSRYKVFVMTLKTGGVGLNLVSADTIFIY-DPWWNTTVENQAIDR 838 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + G + VF Y +I +NTI+E +L+ K+ + D L++ Sbjct: 839 -----AYRLGQDKTVFAYKMIMRNTIEEKILKLQEIKNKLLDDLIS 879 >gi|237740914|ref|ZP_04571395.1| SWF/SNF family helicase [Fusobacterium sp. 4_1_13] gi|229431211|gb|EEO41423.1| SWF/SNF family helicase [Fusobacterium sp. 4_1_13] Length = 899 Score = 40.0 bits (92), Expect = 0.22, Method: Composition-based stats. Identities = 28/106 (26%), Positives = 50/106 (47%), Gaps = 6/106 (5%) Query: 91 GRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 G+T D+ + N+ + + + G GLNL I ++ WW+ Q I+R Sbjct: 780 GQTKDRQNLVDKFQNDSRYKVFVMTLKTGGVGLNLVSADTIFIY-DPWWNTTVENQAIDR 838 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + G + VF Y +I +NTI+E +L+ K+ + D L++ Sbjct: 839 -----AYRLGQDKTVFAYKMIMRNTIEEKILKLQEIKNKLLDDLIS 879 >gi|225557865|gb|EEH06150.1| DNA repair and recombination protein RAD5B [Ajellomyces capsulatus G186AR] Length = 928 Score = 40.0 bits (92), Expect = 0.22, Method: Compositional matrix adjust. Identities = 23/86 (26%), Positives = 41/86 (47%), Gaps = 6/86 (6%) Query: 105 NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA 164 N+ +L A C GLNL N ++ WW Q ++R+ + G KR Sbjct: 821 NDSNCTVLLASLNVCSVGLNL-VAANQVILADSWWAPAIEDQAVDRV-----YRLGQKRP 874 Query: 165 VFVYYLIAQNTIDELVLQRLRTKSTI 190 ++ L+ +N+I++ VL + + K T+ Sbjct: 875 TTIWRLVMENSIEDRVLDKQKEKRTL 900 >gi|254304375|ref|ZP_04971733.1| Snf2 family helicase [Fusobacterium nucleatum subsp. polymorphum ATCC 10953] gi|148324567|gb|EDK89817.1| Snf2 family helicase [Fusobacterium nucleatum subsp. polymorphum ATCC 10953] Length = 899 Score = 40.0 bits (92), Expect = 0.22, Method: Composition-based stats. Identities = 28/106 (26%), Positives = 50/106 (47%), Gaps = 6/106 (5%) Query: 91 GRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 G+T D+ + N+ + + + G GLNL I ++ WW+ Q I+R Sbjct: 780 GQTKDRQNLVDKFQNDSRYKVFVMTLKTGGVGLNLVSADTIFIY-DPWWNTTVENQAIDR 838 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + G + VF Y +I +NTI+E +L+ K+ + D L++ Sbjct: 839 -----AYRLGQDKTVFAYKMIMRNTIEEKILKLQEIKNKLLDDLIS 879 >gi|94271432|ref|ZP_01291955.1| SNF2-related:Helicase-like [delta proteobacterium MLMS-1] gi|93450447|gb|EAT01631.1| SNF2-related:Helicase-like [delta proteobacterium MLMS-1] Length = 940 Score = 40.0 bits (92), Expect = 0.22, Method: Composition-based stats. Identities = 28/97 (28%), Positives = 44/97 (45%), Gaps = 6/97 (6%) Query: 101 IQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 ++++ G L + G GLNL G + ++ WW+ QQ +R + G Sbjct: 833 VEDFQRGGKDLFLISLRAGGLGLNLT-GADYVIHLDPWWNPAVEQQASDR-----AHRIG 886 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 R V VY LI NTI+E +L + K + LL+ Sbjct: 887 QDRPVTVYRLITSNTIEEKILSLHQRKRNLAGDLLDG 923 >gi|222475692|ref|YP_002564213.1| helicase domain protein [Halorubrum lacusprofundi ATCC 49239] gi|222454063|gb|ACM58327.1| helicase domain protein [Halorubrum lacusprofundi ATCC 49239] Length = 584 Score = 39.7 bits (91), Expect = 0.22, Method: Compositional matrix adjust. Identities = 32/99 (32%), Positives = 51/99 (51%), Gaps = 10/99 (10%) Query: 87 AFPQGRTLDKDPCTIQEWNE-GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQ 145 AF G + + ++++ E G I + G NLQ+ N+LV L W+ Sbjct: 411 AFHGGHSSSEKEQIVEDFEEEGGI---LVSTDAMSEGRNLQFC-NLLVNLGLSWN---PM 463 Query: 146 QMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRL 184 +M +RIG R + G KR VFV+ + + T++E VL+RL Sbjct: 464 RMEQRIG--RVHRIGQKRDVFVFNMALKGTVEEYVLERL 500 >gi|34763541|ref|ZP_00144479.1| SWF/SNF family helicase [Fusobacterium nucleatum subsp. vincentii ATCC 49256] gi|27886790|gb|EAA23925.1| SWF/SNF family helicase [Fusobacterium nucleatum subsp. vincentii ATCC 49256] Length = 899 Score = 39.7 bits (91), Expect = 0.22, Method: Composition-based stats. Identities = 28/106 (26%), Positives = 50/106 (47%), Gaps = 6/106 (5%) Query: 91 GRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 G+T D+ + N+ + + + G GLNL I ++ WW+ Q I+R Sbjct: 780 GQTKDRQNLVDKFQNDSRYKVFVMTLKTGGVGLNLVSADTIFIY-DPWWNTTVENQAIDR 838 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + G + VF Y +I +NTI+E +L+ K+ + D L++ Sbjct: 839 -----AYRLGQDKTVFAYKMIMRNTIEEKILKLQEIKNKLLDDLIS 879 >gi|326444829|ref|ZP_08219563.1| SNF2/RAD54 family helicase [Streptomyces clavuligerus ATCC 27064] Length = 980 Score = 39.7 bits (91), Expect = 0.22, Method: Composition-based stats. Identities = 24/97 (24%), Positives = 45/97 (46%), Gaps = 6/97 (6%) Query: 101 IQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 + + G++P+ + G GLNL ++ V WW+ +E R + G Sbjct: 864 VTRFQNGEVPVFLLSLKAAGTGLNLTRAEHV-VHLDRWWN-----PAVEAQATDRAYRIG 917 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 R V V+ LIA+ T+++ + + L K + D +L + Sbjct: 918 QTRPVQVHRLIAEGTVEDRIAELLARKRELADAVLGS 954 >gi|312212592|emb|CBX92675.1| similar to chromodomain helicase (Chd1) [Leptosphaeria maculans] Length = 1610 Score = 39.7 bits (91), Expect = 0.22, Method: Composition-based stats. Identities = 22/72 (30%), Positives = 39/72 (54%), Gaps = 6/72 (8%) Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 G G+NL +++F S W + Q M R + G ++ V VY L++++TI+E Sbjct: 862 GLGINLMTADTVIIFDSDWNPQADLQAM------ARAHRIGQQKPVSVYRLVSKDTIEEE 915 Query: 180 VLQRLRTKSTIQ 191 +L+R R K ++ Sbjct: 916 ILERARNKRMLE 927 >gi|294816509|ref|ZP_06775152.1| Putative SNF2/RAD54 family helicase [Streptomyces clavuligerus ATCC 27064] gi|294329108|gb|EFG10751.1| Putative SNF2/RAD54 family helicase [Streptomyces clavuligerus ATCC 27064] Length = 1040 Score = 39.7 bits (91), Expect = 0.22, Method: Composition-based stats. Identities = 24/97 (24%), Positives = 45/97 (46%), Gaps = 6/97 (6%) Query: 101 IQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 + + G++P+ + G GLNL ++ V WW+ +E R + G Sbjct: 924 VTRFQNGEVPVFLLSLKAAGTGLNLTRAEHV-VHLDRWWN-----PAVEAQATDRAYRIG 977 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 R V V+ LIA+ T+++ + + L K + D +L + Sbjct: 978 QTRPVQVHRLIAEGTVEDRIAELLARKRELADAVLGS 1014 >gi|256846855|ref|ZP_05552310.1| SWF/SNF family helicase [Fusobacterium sp. 3_1_36A2] gi|256717821|gb|EEU31379.1| SWF/SNF family helicase [Fusobacterium sp. 3_1_36A2] Length = 899 Score = 39.7 bits (91), Expect = 0.22, Method: Composition-based stats. Identities = 28/106 (26%), Positives = 50/106 (47%), Gaps = 6/106 (5%) Query: 91 GRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 G+T D+ + N+ + + + G GLNL I ++ WW+ Q I+R Sbjct: 780 GQTKDRQNLVDKFQNDSRYKVFVMTLKTGGVGLNLVSADTIFIY-DPWWNTTVENQAIDR 838 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + G + VF Y +I +NTI+E +L+ K+ + D L++ Sbjct: 839 -----AYRLGQDKTVFAYKMIMRNTIEEKILKLQEIKNKLLDDLIS 879 >gi|326925324|ref|XP_003208867.1| PREDICTED: DNA repair and recombination protein RAD54-like [Meleagris gallopavo] Length = 792 Score = 39.7 bits (91), Expect = 0.22, Method: Compositional matrix adjust. Identities = 23/77 (29%), Positives = 39/77 (50%), Gaps = 6/77 (7%) Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 G GLNL G N LV F W+ +Q + R+ + G K+ ++Y L++ TI+E Sbjct: 625 GCGLNL-IGANRLVMFDPDWNPANDEQAMARVW-----RDGQKKTCYIYRLLSTGTIEEK 678 Query: 180 VLQRLRTKSTIQDLLLN 196 + QR K + +++ Sbjct: 679 IFQRQTHKKALSSCVVD 695 >gi|296138502|ref|YP_003645745.1| SNF2-related protein [Tsukamurella paurometabola DSM 20162] gi|296026636|gb|ADG77406.1| SNF2-related protein [Tsukamurella paurometabola DSM 20162] Length = 1081 Score = 39.7 bits (91), Expect = 0.22, Method: Composition-based stats. Identities = 26/107 (24%), Positives = 50/107 (46%), Gaps = 7/107 (6%) Query: 84 LQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEE 143 ++ A+ G T D+ I+++ G++ + + G GLNL + WW+ Sbjct: 956 VEYAYLDGSTTDR-AAAIEKFTSGEVQVFLISLKAGGFGLNL-VQADYCFLLDPWWNPAA 1013 Query: 144 HQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 Q I+R + G R+V VY L++ TI++ V++ K+ + Sbjct: 1014 EAQAIDR-----AHRIGQTRSVMVYRLVSAGTIEDKVMELKERKAAL 1055 >gi|255586403|ref|XP_002533848.1| ATP binding protein, putative [Ricinus communis] gi|223526215|gb|EEF28539.1| ATP binding protein, putative [Ricinus communis] Length = 1339 Score = 39.7 bits (91), Expect = 0.22, Method: Compositional matrix adjust. Identities = 24/78 (30%), Positives = 39/78 (50%), Gaps = 6/78 (7%) Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 G G+NL ++ + S W + Q M R + G + V VY LI + T++E Sbjct: 1225 GLGINLTAADTVIFYESDWNPTLDLQAM------DRAHRLGQTKDVTVYRLICKETVEEK 1278 Query: 180 VLQRLRTKSTIQDLLLNA 197 +LQR K+T+Q L++ Sbjct: 1279 ILQRASQKNTVQQLVMTG 1296 >gi|317484163|ref|ZP_07943092.1| SNF2 family domain-containing protein [Bilophila wadsworthia 3_1_6] gi|316924512|gb|EFV45669.1| SNF2 family domain-containing protein [Bilophila wadsworthia 3_1_6] Length = 1343 Score = 39.7 bits (91), Expect = 0.23, Method: Composition-based stats. Identities = 29/112 (25%), Positives = 50/112 (44%), Gaps = 7/112 (6%) Query: 80 DLARLQKAFPQGRTLDKD-PCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLW 138 D A + G T D++ + + GK L + G GLNL + ++ W Sbjct: 1215 DAAGYGYQYLDGSTPDRERQAAVAAFQSGKGDLFLISLKAGGQGLNLT-AADYVIHLDPW 1273 Query: 139 WDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 W+ +E R + G +R V VY L+A+ T++E +L+ R+K + Sbjct: 1274 WN-----PAVEDQASDRAYRLGQQRPVTVYRLVARGTVEESILKLHRSKRAL 1320 >gi|326426828|gb|EGD72398.1| chromodomain helicase DNA binding protein 1 [Salpingoeca sp. ATCC 50818] Length = 1534 Score = 39.7 bits (91), Expect = 0.23, Method: Compositional matrix adjust. Identities = 25/84 (29%), Positives = 44/84 (52%), Gaps = 12/84 (14%) Query: 118 SCGHGLNLQYGGNILVFFSLWW---DLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQN 174 + G G+NL +++F S W DL+ Q RIG TRQ V +Y +++N Sbjct: 974 AGGLGVNLATADTVIIFDSDWNPQNDLQA-QARAHRIGQTRQ--------VNIYRFVSKN 1024 Query: 175 TIDELVLQRLRTKSTIQDLLLNAL 198 T++E +L+R + K + L++ + Sbjct: 1025 TVEEDILERAKKKMVLDHLVIQRM 1048 >gi|326428031|gb|EGD73601.1| SNF2 family DNA-dependent ATPase [Salpingoeca sp. ATCC 50818] Length = 2192 Score = 39.7 bits (91), Expect = 0.23, Method: Composition-based stats. Identities = 28/79 (35%), Positives = 38/79 (48%), Gaps = 11/79 (13%) Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 G GLNL ++++ S W + Q + R + G +AV VY LI NT+DE Sbjct: 475 GLGLNLTKADAVILYDSDWNPFADIQ------AIDRAHRIGQTKAVKVYRLITDNTVDEH 528 Query: 180 VLQRLRTKSTIQDLLLNAL 198 + QR K L LNAL Sbjct: 529 IQQRAEAK-----LYLNAL 542 >gi|302810562|ref|XP_002986972.1| hypothetical protein SELMODRAFT_40849 [Selaginella moellendorffii] gi|300145377|gb|EFJ12054.1| hypothetical protein SELMODRAFT_40849 [Selaginella moellendorffii] Length = 849 Score = 39.7 bits (91), Expect = 0.23, Method: Compositional matrix adjust. Identities = 21/65 (32%), Positives = 35/65 (53%), Gaps = 6/65 (9%) Query: 118 SCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 + G GLNL N+ V WW+ +Q ++R+ + G R V V+ L+A ++I+ Sbjct: 758 AAGVGLNLVSASNV-VMLDPWWNPAAEEQAMDRV-----HRLGQTRDVHVFRLVATDSIE 811 Query: 178 ELVLQ 182 E +LQ Sbjct: 812 ERLLQ 816 >gi|225427375|ref|XP_002279753.1| PREDICTED: hypothetical protein [Vitis vinifera] Length = 1084 Score = 39.7 bits (91), Expect = 0.23, Method: Compositional matrix adjust. Identities = 29/158 (18%), Positives = 72/158 (45%), Gaps = 8/158 (5%) Query: 47 HWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNE 106 + E +EK+ ++ + YHF+ + + R + + +I +N+ Sbjct: 884 RFSETMNEKVLVFSQFLDPLTYLMDQLKYHFHWIVGKEVLYMDGQRDVKQRQSSINTFND 943 Query: 107 --GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA 164 ++ +L A +C G++L G + ++ + W+ +ER ++R + G ++ Sbjct: 944 PASQVRVLLASTKACSEGISL-VGASRVILLDVVWN-----PSVERQAISRAYRLGQRKV 997 Query: 165 VFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKET 202 V++Y+L+ T++E R K + +L+ ++ K + Sbjct: 998 VYIYHLLTSGTMEEEKYCRQAKKDRLSELVFSSKDKTS 1035 >gi|315604148|ref|ZP_07879214.1| conserved hypothetical protein [Actinomyces sp. oral taxon 180 str. F0310] gi|315313854|gb|EFU61905.1| conserved hypothetical protein [Actinomyces sp. oral taxon 180 str. F0310] Length = 1045 Score = 39.7 bits (91), Expect = 0.23, Method: Composition-based stats. Identities = 35/135 (25%), Positives = 59/135 (43%), Gaps = 16/135 (11%) Query: 72 IVAYHFNSDLARLQKAFPQ---------GRTLDKDPCTIQEWNEGKIPLLFAHPASCGHG 122 +V F S LAR++ A + G T D+D I+E+ G+ + + G G Sbjct: 901 LVFSQFTSFLARIRGALERRGIAVVQLDGSTRDRDR-VIEEFRSGQAQVFLISLKAGGAG 959 Query: 123 LNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQ 182 L L + V WW+ +Q I+R + G + V VY L+A +TI+ V++ Sbjct: 960 LTLTEADYVYVM-DPWWNPAAEEQAIDR-----AHRIGQTKKVNVYRLVAADTIEAKVVE 1013 Query: 183 RLRTKSTIQDLLLNA 197 K + ++N Sbjct: 1014 LQDRKRRLISSVMNG 1028 >gi|270157430|ref|ZP_06186087.1| SNF2/RAD54 family DNA helicase [Legionella longbeachae D-4968] gi|289164177|ref|YP_003454315.1| DNA/RNA helicases, superfamily II, SNF2 family [Legionella longbeachae NSW150] gi|269989455|gb|EEZ95709.1| SNF2/RAD54 family DNA helicase [Legionella longbeachae D-4968] gi|288857350|emb|CBJ11178.1| putative DNA/RNA helicases, superfamily II, SNF2 family [Legionella longbeachae NSW150] Length = 1091 Score = 39.7 bits (91), Expect = 0.23, Method: Compositional matrix adjust. Identities = 22/81 (27%), Positives = 37/81 (45%), Gaps = 6/81 (7%) Query: 101 IQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 + ++ EG P+ + G GLNL + + + WW+ +E R + G Sbjct: 980 VDKFQEGNTPVFLISLKAGGTGLNLTRADTV-IQYDPWWN-----PAVEAQATDRAHRIG 1033 Query: 161 FKRAVFVYYLIAQNTIDELVL 181 + VFVY LI T++E +L Sbjct: 1034 QENPVFVYKLITAGTVEEAIL 1054 >gi|311070141|ref|YP_003975064.1| putative ATP-binding SNF2 helicase or protein kinase [Bacillus atrophaeus 1942] gi|310870658|gb|ADP34133.1| putative ATP-binding SNF2 helicase or protein kinase [Bacillus atrophaeus 1942] Length = 924 Score = 39.7 bits (91), Expect = 0.24, Method: Compositional matrix adjust. Identities = 27/103 (26%), Positives = 50/103 (48%), Gaps = 7/103 (6%) Query: 95 DKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 D+D ++++ + + P L + G GLNL N ++ + WW+ +E Sbjct: 804 DRDSL-VEKFQKKEYPTLILSLKAGGTGLNLTA-ANHVIHYDRWWN-----PAVENQATD 856 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 R + G +R V V+ +I TI+E + L TK T+ D ++ + Sbjct: 857 RAYRIGQERFVHVHKMITTGTIEEKIDMMLETKQTLNDQIIQS 899 >gi|294056264|ref|YP_003549922.1| SNF2-related protein [Coraliomargarita akajimensis DSM 45221] gi|293615597|gb|ADE55752.1| SNF2-related protein [Coraliomargarita akajimensis DSM 45221] Length = 1024 Score = 39.7 bits (91), Expect = 0.24, Method: Compositional matrix adjust. Identities = 26/81 (32%), Positives = 40/81 (49%), Gaps = 7/81 (8%) Query: 103 EWNE-GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGF 161 E+NE IP+ + G GLNL G + +V + WW+ Q +R + G Sbjct: 914 EFNEDASIPVFLISLKAGGTGLNL-TGADTVVHYDPWWNPAAEAQATDRA-----HRIGQ 967 Query: 162 KRAVFVYYLIAQNTIDELVLQ 182 ++ V LIA NT++E VL+ Sbjct: 968 EKVVTSIKLIAANTVEEKVLE 988 >gi|118094595|ref|XP_422447.2| PREDICTED: similar to putative recombination factor GdRad54 [Gallus gallus] Length = 804 Score = 39.7 bits (91), Expect = 0.24, Method: Compositional matrix adjust. Identities = 23/77 (29%), Positives = 39/77 (50%), Gaps = 6/77 (7%) Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 G GLNL G N LV F W+ +Q + R+ + G K+ ++Y L++ TI+E Sbjct: 637 GCGLNL-IGANRLVMFDPDWNPANDEQAMARVW-----RDGQKKTCYIYRLLSTGTIEEK 690 Query: 180 VLQRLRTKSTIQDLLLN 196 + QR K + +++ Sbjct: 691 IFQRQTHKKALSSCVVD 707 >gi|45201219|ref|NP_986789.1| AGR123Cp [Ashbya gossypii ATCC 10895] gi|44986073|gb|AAS54613.1| AGR123Cp [Ashbya gossypii ATCC 10895] Length = 1422 Score = 39.7 bits (91), Expect = 0.24, Method: Compositional matrix adjust. Identities = 22/74 (29%), Positives = 38/74 (51%), Gaps = 6/74 (8%) Query: 118 SCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 + G G+NL +++F S W + Q M R + G K V VY ++++T++ Sbjct: 753 AGGLGINLMTADTVIIFDSDWNPQADLQAM------ARAHRIGQKNHVMVYRFVSKDTVE 806 Query: 178 ELVLQRLRTKSTIQ 191 E VL+R R K ++ Sbjct: 807 EEVLERARKKMILE 820 >gi|330808510|ref|YP_004352972.1| Putative non-specific serine/threonine protein [Pseudomonas brassicacearum subsp. brassicacearum NFM421] gi|327376618|gb|AEA67968.1| Putative non-specific serine/threonine protein [Pseudomonas brassicacearum subsp. brassicacearum NFM421] Length = 897 Score = 39.7 bits (91), Expect = 0.24, Method: Compositional matrix adjust. Identities = 25/88 (28%), Positives = 43/88 (48%), Gaps = 7/88 (7%) Query: 91 GRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 G+T D+ ++E+ GK + + G GLNL + + + WW+ Q +R Sbjct: 771 GQTRDRR-TPVKEFQSGKRQIFLISLKAGGVGLNLTEADTV-IHYDPWWNPATENQATDR 828 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDE 178 + G ++ VFVY LIA+ T++E Sbjct: 829 A-----YRIGQEKPVFVYKLIARGTVEE 851 >gi|327439414|dbj|BAK15779.1| superfamily II DNA/RNA helicase, SNF2 family [Solibacillus silvestris StLB046] Length = 1061 Score = 39.7 bits (91), Expect = 0.25, Method: Compositional matrix adjust. Identities = 29/93 (31%), Positives = 46/93 (49%), Gaps = 9/93 (9%) Query: 104 WNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKR 163 +N+G+ + + G GLNL G + ++ + LWW+ +E R + G K Sbjct: 955 FNDGERDMFLISLKAGGTGLNLT-GADTVILYDLWWN-----PAVEEQAADRAHRMGQKE 1008 Query: 164 AVFVYYLIAQNTIDELV--LQRLRTKSTIQDLL 194 V V LIA TI+E + LQ+ + K I D+L Sbjct: 1009 VVQVIKLIANGTIEEKMSELQQ-KKKMLISDIL 1040 >gi|308160977|gb|EFO63440.1| Transcriptional regulator ATRX, putative [Giardia lamblia P15] Length = 1367 Score = 39.7 bits (91), Expect = 0.25, Method: Compositional matrix adjust. Identities = 26/82 (31%), Positives = 43/82 (52%), Gaps = 6/82 (7%) Query: 122 GLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVL 181 GLNL G N ++ F+ W L+ +Q + R + G KR V VY L NT++E ++ Sbjct: 739 GLNLT-GANRVILFAPAWSLQIEEQ-----AIARAYRMGQKRNVVVYKLACINTLEEKMV 792 Query: 182 QRLRTKSTIQDLLLNALKKETI 203 R K+ I ++ L+ K ++ Sbjct: 793 VRQLQKAGIANVTLDDEKHRSV 814 >gi|289450552|ref|YP_003475678.1| SNF2 family N-terminal domain-containing protein [Clostridiales genomosp. BVAB3 str. UPII9-5] gi|289185099|gb|ADC91524.1| SNF2 family N-terminal domain protein [Clostridiales genomosp. BVAB3 str. UPII9-5] Length = 1107 Score = 39.7 bits (91), Expect = 0.25, Method: Compositional matrix adjust. Identities = 24/80 (30%), Positives = 40/80 (50%), Gaps = 6/80 (7%) Query: 101 IQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 + ++N G+ + + G GLNL G + ++ WW+ QQ +R + G Sbjct: 998 VNKFNAGEGEVFLISLKAGGTGLNLT-GADTVILMDPWWNPAVEQQATDR-----SHRLG 1051 Query: 161 FKRAVFVYYLIAQNTIDELV 180 +R V VY LIA+ TI+E + Sbjct: 1052 QQRRVQVYRLIAKGTIEEKI 1071 >gi|262371025|ref|ZP_06064348.1| helicase superfamily protein II [Acinetobacter johnsonii SH046] gi|262314101|gb|EEY95145.1| helicase superfamily protein II [Acinetobacter johnsonii SH046] Length = 1115 Score = 39.7 bits (91), Expect = 0.25, Method: Compositional matrix adjust. Identities = 26/107 (24%), Positives = 50/107 (46%), Gaps = 7/107 (6%) Query: 91 GRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 G+T +D I + G++P+ + G GLNL + ++ + WW+ Q +R Sbjct: 996 GKTKKRDEV-ITAFQSGQVPVFLISLKAGGVGLNLT-AADTVIHYDPWWNPAAEDQASDR 1053 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + G + VFVY LI +I+E ++ + K+ + +L+ Sbjct: 1054 AW-----RIGQNKPVFVYKLITNKSIEEKIIALQQNKAELAHSILST 1095 >gi|326923617|ref|XP_003208031.1| PREDICTED: lymphoid-specific helicase-like [Meleagris gallopavo] Length = 871 Score = 39.7 bits (91), Expect = 0.25, Method: Compositional matrix adjust. Identities = 26/94 (27%), Positives = 46/94 (48%), Gaps = 12/94 (12%) Query: 105 NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLW---WDLEEHQQMIERIGVTRQRQAGF 161 N+ ++ L + G G+NL ++++ S W DL + Q RIG T Sbjct: 695 NDPEVFLFLVSTRAGGLGINLTAADTVIIYDSDWNPQSDL-QAQDRCHRIGQT------- 746 Query: 162 KRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 + V VY L+ NTID+ +++R K ++ L++ Sbjct: 747 -KPVVVYRLVTANTIDQKIVERAAAKRKLEKLII 779 >gi|298385406|ref|ZP_06994964.1| zinc finger Ran-binding domain-containing protein 3 [Bacteroides sp. 1_1_14] gi|298261547|gb|EFI04413.1| zinc finger Ran-binding domain-containing protein 3 [Bacteroides sp. 1_1_14] Length = 502 Score = 39.7 bits (91), Expect = 0.25, Method: Compositional matrix adjust. Identities = 33/134 (24%), Positives = 54/134 (40%), Gaps = 13/134 (9%) Query: 71 IIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEW-------NEGKIPLLFAHPASCGHGL 123 +IV + + LQK FP+ T+ I + N + L+ + G GL Sbjct: 352 LIVFCSLHEIVDELQKVFPKAVTVTGRDSAINKQASVDAFQNNPNVQLIICSIKAAGVGL 411 Query: 124 NLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQR 183 L N+ F L W + Q +R + G K V YYL+ + TID + Sbjct: 412 TLTASSNV-AFIELAWTYADCCQCEDR-----AHRIGQKDNVTCYYLLGRGTIDHTIYSL 465 Query: 184 LRTKSTIQDLLLNA 197 + K +I ++N+ Sbjct: 466 IHRKKSIASEIMNS 479 >gi|55820334|ref|YP_138776.1| ATP-dependent RNA helicase [Streptococcus thermophilus LMG 18311] gi|55736319|gb|AAV59961.1| ATP-dependent RNA helicase [Streptococcus thermophilus LMG 18311] Length = 1031 Score = 39.7 bits (91), Expect = 0.25, Method: Compositional matrix adjust. Identities = 25/94 (26%), Positives = 45/94 (47%), Gaps = 6/94 (6%) Query: 104 WNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKR 163 +N+G + G GLNL G + ++ LWW+ +E ++R + G K+ Sbjct: 923 FNQGSRDAFLISLKAGGVGLNLT-GADTVILIDLWWN-----PAVEMQAISRAHRIGQKQ 976 Query: 164 AVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 V V+ LI + TI+E +L+ K + +L+ Sbjct: 977 NVEVFRLITRGTIEEKILELQEGKKNLVTTVLDG 1010 >gi|291398984|ref|XP_002715711.1| PREDICTED: RAD54-like protein [Oryctolagus cuniculus] Length = 755 Score = 39.7 bits (91), Expect = 0.25, Method: Compositional matrix adjust. Identities = 23/77 (29%), Positives = 39/77 (50%), Gaps = 6/77 (7%) Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 G GLNL G N LV F W+ +Q + R+ + G K+ ++Y L++ TI+E Sbjct: 585 GCGLNL-IGANRLVMFDPDWNPANDEQAMARVW-----RDGQKKTCYIYRLLSAGTIEEK 638 Query: 180 VLQRLRTKSTIQDLLLN 196 + QR K + +++ Sbjct: 639 IFQRQSHKKALSSCVVD 655 >gi|118092730|ref|XP_421626.2| PREDICTED: similar to proliferation-associated SNF2-like protein [Gallus gallus] Length = 822 Score = 39.7 bits (91), Expect = 0.25, Method: Compositional matrix adjust. Identities = 26/94 (27%), Positives = 46/94 (48%), Gaps = 12/94 (12%) Query: 105 NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLW---WDLEEHQQMIERIGVTRQRQAGF 161 N+ ++ L + G G+NL ++++ S W DL + Q RIG T Sbjct: 646 NDPEVFLFLVSTRAGGLGINLTAADTVIIYDSDWNPQSDL-QAQDRCHRIGQT------- 697 Query: 162 KRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 + V VY L+ NTID+ +++R K ++ L++ Sbjct: 698 -KPVVVYRLVTANTIDQKIVERAAAKRKLEKLII 730 >gi|224090059|ref|XP_002308925.1| chromatin remodeling complex subunit [Populus trichocarpa] gi|222854901|gb|EEE92448.1| chromatin remodeling complex subunit [Populus trichocarpa] Length = 1483 Score = 39.7 bits (91), Expect = 0.25, Method: Compositional matrix adjust. Identities = 24/78 (30%), Positives = 38/78 (48%), Gaps = 6/78 (7%) Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 G G+NL ++ + S W + Q M R + G + V VY LI + T++E Sbjct: 1240 GLGINLTAADTVIFYESDWNPTLDLQAM------DRAHRLGQTKDVTVYRLICKETVEEK 1293 Query: 180 VLQRLRTKSTIQDLLLNA 197 +LQR K T+Q L++ Sbjct: 1294 ILQRASQKHTVQQLVMTG 1311 >gi|23099744|ref|NP_693210.1| helicase [Oceanobacillus iheyensis HTE831] gi|22777974|dbj|BAC14245.1| helicase (swi/snf family) [Oceanobacillus iheyensis HTE831] Length = 1051 Score = 39.7 bits (91), Expect = 0.25, Method: Compositional matrix adjust. Identities = 24/94 (25%), Positives = 47/94 (50%), Gaps = 6/94 (6%) Query: 104 WNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKR 163 +N+G + + G GLNL G + ++ + +WW+ +Q I+R + G + Sbjct: 941 FNQGNREVCLISLKAGGTGLNL-VGADTVILYDVWWNPAVEEQAIDR-----AHRIGQQS 994 Query: 164 AVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 V V L+++ TI+E + + R K + + L+N Sbjct: 995 EVTVIRLLSEGTIEEKMYELQRKKRELMNYLVNG 1028 >gi|325190696|emb|CCA25192.1| unnamed protein product putative [Albugo laibachii Nc14] Length = 835 Score = 39.7 bits (91), Expect = 0.26, Method: Compositional matrix adjust. Identities = 23/96 (23%), Positives = 49/96 (51%), Gaps = 8/96 (8%) Query: 105 NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLE-EHQQMIERIGVTRQRQAGFKR 163 ++ ++ +L + G+NL + N LV F + W+ +HQ M R + G + Sbjct: 678 SDNRVKVLLVSTRAGAEGINL-HAANRLVLFDVSWNPSYDHQSM------CRSHRLGQSK 730 Query: 164 AVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 V VY L++ T++ ++ ++ R K+++ L++ K Sbjct: 731 TVHVYRLVSTGTMERMIYEQQRKKTSLSMALVDRSK 766 >gi|226313275|ref|YP_002773169.1| hypothetical protein BBR47_36880 [Brevibacillus brevis NBRC 100599] gi|226096223|dbj|BAH44665.1| conserved hypothetical protein [Brevibacillus brevis NBRC 100599] Length = 1090 Score = 39.7 bits (91), Expect = 0.26, Method: Compositional matrix adjust. Identities = 23/75 (30%), Positives = 37/75 (49%), Gaps = 6/75 (8%) Query: 104 WNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKR 163 +NEG+ L + G GLN+ G + ++ + LWW+ QQ R + G K Sbjct: 984 FNEGERDLFLMSLKAGGTGLNVT-GADTVILYDLWWNPAVEQQ-----AADRAHRIGQKN 1037 Query: 164 AVFVYYLIAQNTIDE 178 V V L+A+ T++E Sbjct: 1038 VVQVIRLVAEGTVEE 1052 >gi|188587846|ref|YP_001921061.1| SWI/SNF family helicase [Clostridium botulinum E3 str. Alaska E43] gi|188498127|gb|ACD51263.1| SWI/SNF family helicase [Clostridium botulinum E3 str. Alaska E43] Length = 1086 Score = 39.7 bits (91), Expect = 0.26, Method: Composition-based stats. Identities = 26/95 (27%), Positives = 47/95 (49%), Gaps = 6/95 (6%) Query: 101 IQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 + ++N+G+ + + G GLNL +I++ F WW+ +E R + G Sbjct: 975 VDDFNDGENNVFLVSLKAGGTGLNLT-SADIVIHFDPWWN-----PAVEDQATDRAHRIG 1028 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 + V V LIAQ TI+E +++ +K + D +L Sbjct: 1029 QENTVEVIKLIAQGTIEEKIVELQDSKRKLIDTIL 1063 >gi|195539537|ref|NP_001124238.1| DNA repair and recombination protein RAD54-like [Bos taurus] gi|119935983|gb|ABM06051.1| RAD54-like protein [Bos taurus] gi|296488837|gb|DAA30950.1| RAD54-like [Bos taurus] Length = 749 Score = 39.7 bits (91), Expect = 0.26, Method: Compositional matrix adjust. Identities = 23/77 (29%), Positives = 39/77 (50%), Gaps = 6/77 (7%) Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 G GLNL G N LV F W+ +Q + R+ + G K+ ++Y L++ TI+E Sbjct: 578 GCGLNL-IGANRLVMFDPDWNPANDEQAMARVW-----RDGQKKTCYIYRLLSAGTIEEK 631 Query: 180 VLQRLRTKSTIQDLLLN 196 + QR K + +++ Sbjct: 632 IFQRQSHKKALSSCVVD 648 >gi|51316190|sp|O12944|RAD54_CHICK RecName: Full=DNA repair and recombination protein RAD54-like; AltName: Full=Putative recombination factor GdRad54; AltName: Full=RAD54 homolog gi|1905887|gb|AAB54115.1| putative recombination factor GdRad54 [Gallus gallus] Length = 733 Score = 39.7 bits (91), Expect = 0.26, Method: Compositional matrix adjust. Identities = 23/77 (29%), Positives = 39/77 (50%), Gaps = 6/77 (7%) Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 G GLNL G N LV F W+ +Q + R+ + G K+ ++Y L++ TI+E Sbjct: 566 GCGLNL-IGANRLVMFDPDWNPANDEQAMARVW-----RDGQKKTCYIYRLLSTGTIEEK 619 Query: 180 VLQRLRTKSTIQDLLLN 196 + QR K + +++ Sbjct: 620 IFQRQTHKKALSSCVVD 636 >gi|187934555|ref|YP_001886021.1| SWI/SNF family helicase [Clostridium botulinum B str. Eklund 17B] gi|187722708|gb|ACD23929.1| SWI/SNF family helicase [Clostridium botulinum B str. Eklund 17B] Length = 1086 Score = 39.7 bits (91), Expect = 0.26, Method: Composition-based stats. Identities = 26/95 (27%), Positives = 47/95 (49%), Gaps = 6/95 (6%) Query: 101 IQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 + ++N+G+ + + G GLNL +I++ F WW+ +E R + G Sbjct: 975 VDDFNDGENNVFLVSLKAGGTGLNLT-SADIVIHFDPWWN-----PAVEDQATDRAHRIG 1028 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 + V V LIAQ TI+E +++ +K + D +L Sbjct: 1029 QENTVEVIKLIAQGTIEEKIVELQDSKRKLIDTIL 1063 >gi|258568006|ref|XP_002584747.1| DNA repair and recombination protein RAD54 [Uncinocarpus reesii 1704] gi|237906193|gb|EEP80594.1| DNA repair and recombination protein RAD54 [Uncinocarpus reesii 1704] Length = 1534 Score = 39.7 bits (91), Expect = 0.26, Method: Compositional matrix adjust. Identities = 25/78 (32%), Positives = 39/78 (50%), Gaps = 6/78 (7%) Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 G G+NL G N LV F W+ QQ + R+ + G K+ FVY IA +I+E Sbjct: 502 GCGINL-VGANRLVLFDPDWNPAADQQALARVW-----RDGQKKDCFVYRFIATGSIEEK 555 Query: 180 VLQRLRTKSTIQDLLLNA 197 + QR K + ++++ Sbjct: 556 IFQRQSHKQLLSSCVVDS 573 >gi|108762463|ref|YP_629793.1| SNF2/helicase domain-containing protein [Myxococcus xanthus DK 1622] gi|108466343|gb|ABF91528.1| SNF2/helicase domain protein [Myxococcus xanthus DK 1622] Length = 1208 Score = 39.7 bits (91), Expect = 0.26, Method: Composition-based stats. Identities = 23/81 (28%), Positives = 38/81 (46%), Gaps = 6/81 (7%) Query: 101 IQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 ++ + EG +PL + G GLNL ++ WW+ +E R + G Sbjct: 1085 VRAFQEGDVPLFLISLKAGGFGLNLT-AATTVIHLDPWWN-----PAVEDQASDRAHRIG 1138 Query: 161 FKRAVFVYYLIAQNTIDELVL 181 +R V VY L+ + TI+E +L Sbjct: 1139 QERPVTVYRLVTRGTIEEQML 1159 >gi|116627171|ref|YP_819790.1| SNF2 family DNA/RNA helicase [Streptococcus thermophilus LMD-9] gi|116100448|gb|ABJ65594.1| Superfamily II DNA/RNA helicase, SNF2 family [Streptococcus thermophilus LMD-9] Length = 1031 Score = 39.7 bits (91), Expect = 0.26, Method: Compositional matrix adjust. Identities = 25/94 (26%), Positives = 45/94 (47%), Gaps = 6/94 (6%) Query: 104 WNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKR 163 +N+G + G GLNL G + ++ LWW+ +E ++R + G K+ Sbjct: 923 FNQGSRDAFLISLKAGGVGLNLT-GADTVILIDLWWN-----PAVEMQAISRAHRIGQKQ 976 Query: 164 AVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 V V+ LI + TI+E +L+ K + +L+ Sbjct: 977 NVEVFRLITRGTIEEKILELQEGKKNLVTTVLDG 1010 >gi|312277649|gb|ADQ62306.1| Superfamily II DNA/RNA helicase, SNF2 family [Streptococcus thermophilus ND03] Length = 1031 Score = 39.7 bits (91), Expect = 0.26, Method: Compositional matrix adjust. Identities = 25/94 (26%), Positives = 45/94 (47%), Gaps = 6/94 (6%) Query: 104 WNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKR 163 +N+G + G GLNL G + ++ LWW+ +E ++R + G K+ Sbjct: 923 FNQGSRDAFLISLKAGGVGLNLT-GADTVILIDLWWN-----PAVEMQAISRAHRIGQKQ 976 Query: 164 AVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 V V+ LI + TI+E +L+ K + +L+ Sbjct: 977 NVEVFRLITRGTIEEKILELQEGKKNLVTTVLDG 1010 >gi|296207850|ref|XP_002750833.1| PREDICTED: DNA repair and recombination protein RAD54-like [Callithrix jacchus] Length = 746 Score = 39.7 bits (91), Expect = 0.26, Method: Compositional matrix adjust. Identities = 23/77 (29%), Positives = 39/77 (50%), Gaps = 6/77 (7%) Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 G GLNL G N LV F W+ +Q + R+ + G K+ ++Y L++ TI+E Sbjct: 576 GCGLNL-IGANRLVMFDPDWNPANDEQAMARVW-----RDGQKKTCYIYRLLSAGTIEEK 629 Query: 180 VLQRLRTKSTIQDLLLN 196 + QR K + +++ Sbjct: 630 IFQRQSHKKALSSCVVD 646 >gi|55822225|ref|YP_140666.1| ATP-dependent RNA helicase [Streptococcus thermophilus CNRZ1066] gi|55738210|gb|AAV61851.1| ATP-dependent RNA helicase [Streptococcus thermophilus CNRZ1066] Length = 1031 Score = 39.7 bits (91), Expect = 0.26, Method: Compositional matrix adjust. Identities = 25/94 (26%), Positives = 45/94 (47%), Gaps = 6/94 (6%) Query: 104 WNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKR 163 +N+G + G GLNL G + ++ LWW+ +E ++R + G K+ Sbjct: 923 FNQGSRDAFLISLKAGGVGLNLT-GADTVILIDLWWN-----PAVEMQAISRAHRIGQKQ 976 Query: 164 AVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 V V+ LI + TI+E +L+ K + +L+ Sbjct: 977 NVEVFRLITRGTIEEKILELQEGKKNLVTTVLDG 1010 >gi|327271091|ref|XP_003220321.1| PREDICTED: DNA repair and recombination protein RAD54-like [Anolis carolinensis] Length = 906 Score = 39.7 bits (91), Expect = 0.27, Method: Compositional matrix adjust. Identities = 23/77 (29%), Positives = 39/77 (50%), Gaps = 6/77 (7%) Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 G GLNL G N LV F W+ +Q + R+ + G K+ ++Y L++ TI+E Sbjct: 739 GCGLNL-IGANRLVMFDPDWNPANDEQAMARVW-----RDGQKKTCYIYRLLSTGTIEEK 792 Query: 180 VLQRLRTKSTIQDLLLN 196 + QR K + +++ Sbjct: 793 IFQRQTHKKALSSCVVD 809 >gi|299751451|ref|XP_001830276.2| hypothetical protein CC1G_01912 [Coprinopsis cinerea okayama7#130] gi|298409380|gb|EAU91423.2| hypothetical protein CC1G_01912 [Coprinopsis cinerea okayama7#130] Length = 1032 Score = 39.7 bits (91), Expect = 0.27, Method: Composition-based stats. Identities = 27/82 (32%), Positives = 41/82 (50%), Gaps = 7/82 (8%) Query: 122 GLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVL 181 GLNL ++ + WW Q+ IE V R + G K+ V VY LIA+NT++ VL Sbjct: 921 GLNLTVANHVYLM-DPWW-----QEGIESQAVDRVNRIGQKKPVHVYQLIAENTVESKVL 974 Query: 182 Q-RLRTKSTIQDLLLNALKKET 202 + + R K ++ +ET Sbjct: 975 EIQDRKKQLVKQAFSGIKSRET 996 >gi|242021397|ref|XP_002431131.1| conserved hypothetical protein [Pediculus humanus corporis] gi|212516380|gb|EEB18393.1| conserved hypothetical protein [Pediculus humanus corporis] Length = 745 Score = 39.7 bits (91), Expect = 0.27, Method: Compositional matrix adjust. Identities = 29/106 (27%), Positives = 50/106 (47%), Gaps = 8/106 (7%) Query: 93 TLDKDPCTIQEWN--EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 T+ K ++++N E K + + G GLNL G N LV F W+ Q + R Sbjct: 549 TIKKRGKVVEKFNDPESKDFIFMLSSKAGGCGLNL-IGANRLVMFDPDWNPANDDQAMAR 607 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + + G K+ F+Y L++ TI+E + QR K + +++ Sbjct: 608 VW-----RDGQKKPCFIYRLLSTGTIEEKIFQRQAHKKALSSTVVD 648 >gi|178056748|ref|NP_001116655.1| DNA repair and recombination protein RAD54-like [Sus scrofa] gi|168084900|dbj|BAG09488.1| DNA repair protein RAD54 [Sus scrofa] Length = 747 Score = 39.7 bits (91), Expect = 0.27, Method: Compositional matrix adjust. Identities = 23/77 (29%), Positives = 39/77 (50%), Gaps = 6/77 (7%) Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 G GLNL G N LV F W+ +Q + R+ + G K+ ++Y L++ TI+E Sbjct: 577 GCGLNL-IGANRLVMFDPDWNPANDEQAMARVW-----RDGQKKTCYIYRLLSAGTIEEK 630 Query: 180 VLQRLRTKSTIQDLLLN 196 + QR K + +++ Sbjct: 631 IFQRQSHKKALSSCVVD 647 >gi|94264348|ref|ZP_01288140.1| SNF2-related:Helicase-like [delta proteobacterium MLMS-1] gi|93455242|gb|EAT05455.1| SNF2-related:Helicase-like [delta proteobacterium MLMS-1] Length = 1285 Score = 39.7 bits (91), Expect = 0.27, Method: Composition-based stats. Identities = 28/97 (28%), Positives = 44/97 (45%), Gaps = 6/97 (6%) Query: 101 IQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 ++++ G L + G GLNL G + ++ WW+ QQ +R + G Sbjct: 1178 VEDFQRGGKDLFLISLRAGGLGLNLT-GADYVIHLDPWWNPAVEQQASDR-----AHRIG 1231 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 R V VY LI NTI+E +L + K + LL+ Sbjct: 1232 QDRPVTVYRLITSNTIEEKILSLHQRKRNLAGDLLDG 1268 >gi|188996818|ref|YP_001931069.1| Non-specific serine/threonine protein kinase [Sulfurihydrogenibium sp. YO3AOP1] gi|188931885|gb|ACD66515.1| Non-specific serine/threonine protein kinase [Sulfurihydrogenibium sp. YO3AOP1] Length = 559 Score = 39.7 bits (91), Expect = 0.28, Method: Compositional matrix adjust. Identities = 22/73 (30%), Positives = 39/73 (53%), Gaps = 6/73 (8%) Query: 118 SCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 + G GL L + ++FF L W+ + Q +R+ + G K V +Y I QNT++ Sbjct: 462 AAGEGLTLT-SSSYVIFFDLHWNPAKMWQAEDRV-----HRIGQKNKVNIYTFITQNTVE 515 Query: 178 ELVLQRLRTKSTI 190 E ++Q+L K ++ Sbjct: 516 EKIMQKLEEKRSM 528 >gi|216548186|ref|NP_003570.2| DNA repair and recombination protein RAD54-like [Homo sapiens] gi|216548193|ref|NP_001136020.1| DNA repair and recombination protein RAD54-like [Homo sapiens] gi|51316508|sp|Q92698|RAD54_HUMAN RecName: Full=DNA repair and recombination protein RAD54-like; AltName: Full=RAD54 homolog; Short=hHR54; Short=hRAD54 gi|47777671|gb|AAT38113.1| RAD54-like (S. cerevisiae) [Homo sapiens] gi|56204069|emb|CAI22117.1| RAD54-like (S. cerevisiae) [Homo sapiens] gi|111307699|gb|AAI21061.1| RAD54-like (S. cerevisiae) [Homo sapiens] gi|111309424|gb|AAI21060.1| RAD54-like (S. cerevisiae) [Homo sapiens] gi|119627335|gb|EAX06930.1| RAD54-like (S. cerevisiae), isoform CRA_b [Homo sapiens] Length = 747 Score = 39.7 bits (91), Expect = 0.28, Method: Compositional matrix adjust. Identities = 23/77 (29%), Positives = 39/77 (50%), Gaps = 6/77 (7%) Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 G GLNL G N LV F W+ +Q + R+ + G K+ ++Y L++ TI+E Sbjct: 577 GCGLNL-IGANRLVMFDPDWNPANDEQAMARVW-----RDGQKKTCYIYRLLSAGTIEEK 630 Query: 180 VLQRLRTKSTIQDLLLN 196 + QR K + +++ Sbjct: 631 IFQRQSHKKALSSCVVD 647 >gi|224541793|ref|ZP_03682332.1| hypothetical protein CATMIT_00965 [Catenibacterium mitsuokai DSM 15897] gi|224525290|gb|EEF94395.1| hypothetical protein CATMIT_00965 [Catenibacterium mitsuokai DSM 15897] Length = 1067 Score = 39.7 bits (91), Expect = 0.28, Method: Compositional matrix adjust. Identities = 40/153 (26%), Positives = 61/153 (39%), Gaps = 22/153 (14%) Query: 40 VYYDEEKHWKEVHDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAFPQGRTL--- 94 + +D+ KH K++A II+ K N IIV F S L L K + +T Sbjct: 888 IVFDDVKH----KSSKMEACLNIIQTYKDNNKKIIVFSSFKSLLNLLAKELDKSKTSYYM 943 Query: 95 -------DKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQM 147 +K + + + + G GLNL + V F WW++ Q Sbjct: 944 LTGDTEKEKRKGLVDAYQNDDTTVFLISLKAGGTGLNLTAAEGV-VHFDPWWNMSAQNQ- 1001 Query: 148 IERIGVTRQRQAGFKRAVFVYYLIAQNTIDELV 180 R + G K VFVY LI ++I+E + Sbjct: 1002 ----ATDRAYRIGQKNKVFVYKLIMADSIEEKI 1030 >gi|328352490|emb|CCA38889.1| chromodomain-helicase-DNA-binding protein 1 [Pichia pastoris CBS 7435] Length = 1387 Score = 39.7 bits (91), Expect = 0.28, Method: Compositional matrix adjust. Identities = 22/74 (29%), Positives = 38/74 (51%), Gaps = 6/74 (8%) Query: 118 SCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 + G G+NL +++F S W + Q M R + G K V VY ++++T++ Sbjct: 745 AGGLGINLMTADTVIIFDSDWNPQADLQAM------ARAHRIGQKNHVMVYRFVSKDTVE 798 Query: 178 ELVLQRLRTKSTIQ 191 E VL+R R K ++ Sbjct: 799 EEVLERARKKMILE 812 >gi|281415208|ref|ZP_06246950.1| DNA/RNA helicase, superfamily II, SNF2 family protein [Micrococcus luteus NCTC 2665] Length = 630 Score = 39.7 bits (91), Expect = 0.28, Method: Composition-based stats. Identities = 27/103 (26%), Positives = 48/103 (46%), Gaps = 7/103 (6%) Query: 80 DLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWW 139 D ++ A+ G T + I+ + EG+ P+ + G GL L + + WW Sbjct: 494 DHLEIEHAYLDGSTRGRAD-VIRGFREGEAPVFLISLKAGGFGLTLTEADYVFLM-DPWW 551 Query: 140 DLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQ 182 + Q ++R + G +R V VY L+++ TI+E VL+ Sbjct: 552 NPAAEAQAVDR-----AHRIGQERTVMVYRLVSEGTIEEKVLE 589 >gi|254567734|ref|XP_002490977.1| Nucleosome remodeling factor that functions in regulation of transcription elongation [Pichia pastoris GS115] gi|238030774|emb|CAY68697.1| Nucleosome remodeling factor that functions in regulation of transcription elongation [Pichia pastoris GS115] Length = 1387 Score = 39.7 bits (91), Expect = 0.28, Method: Compositional matrix adjust. Identities = 22/74 (29%), Positives = 38/74 (51%), Gaps = 6/74 (8%) Query: 118 SCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 + G G+NL +++F S W + Q M R + G K V VY ++++T++ Sbjct: 745 AGGLGINLMTADTVIIFDSDWNPQADLQAM------ARAHRIGQKNHVMVYRFVSKDTVE 798 Query: 178 ELVLQRLRTKSTIQ 191 E VL+R R K ++ Sbjct: 799 EEVLERARKKMILE 812 >gi|158258659|dbj|BAF85300.1| unnamed protein product [Homo sapiens] Length = 747 Score = 39.7 bits (91), Expect = 0.28, Method: Compositional matrix adjust. Identities = 23/77 (29%), Positives = 39/77 (50%), Gaps = 6/77 (7%) Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 G GLNL G N LV F W+ +Q + R+ + G K+ ++Y L++ TI+E Sbjct: 577 GCGLNL-IGANRLVMFDPDWNPANDEQAMARVW-----RDGQKKTCYIYRLLSAGTIEEK 630 Query: 180 VLQRLRTKSTIQDLLLN 196 + QR K + +++ Sbjct: 631 IFQRQSHKKALSSCVVD 647 >gi|150017499|ref|YP_001309753.1| non-specific serine/threonine protein kinase [Clostridium beijerinckii NCIMB 8052] gi|149903964|gb|ABR34797.1| Non-specific serine/threonine protein kinase [Clostridium beijerinckii NCIMB 8052] Length = 1085 Score = 39.7 bits (91), Expect = 0.28, Method: Composition-based stats. Identities = 27/95 (28%), Positives = 46/95 (48%), Gaps = 6/95 (6%) Query: 101 IQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 + E+N G+ + + G GLNL +I++ F WW+ +E R + G Sbjct: 972 VDEFNNGENTVFLVSLKAGGTGLNLT-SADIVIHFDPWWN-----PAVEDQATDRAHRIG 1025 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 K V V LIAQ TI+E +++ +K + + +L Sbjct: 1026 QKNVVEVIKLIAQGTIEEKIVELQDSKRELINKIL 1060 >gi|1495483|emb|CAA66379.1| RAD54 [Homo sapiens] Length = 747 Score = 39.3 bits (90), Expect = 0.29, Method: Compositional matrix adjust. Identities = 23/77 (29%), Positives = 39/77 (50%), Gaps = 6/77 (7%) Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 G GLNL G N LV F W+ +Q + R+ + G K+ ++Y L++ TI+E Sbjct: 577 GCGLNL-IGANRLVMFDPDWNPANDEQAMARVW-----RDGQKKTCYIYRLLSAGTIEEK 630 Query: 180 VLQRLRTKSTIQDLLLN 196 + QR K + +++ Sbjct: 631 IFQRQSHKKALSSCVVD 647 >gi|329903743|ref|ZP_08273604.1| DNA helicase, SNF2/RAD54 family [Oxalobacteraceae bacterium IMCC9480] gi|327548223|gb|EGF32923.1| DNA helicase, SNF2/RAD54 family [Oxalobacteraceae bacterium IMCC9480] Length = 824 Score = 39.3 bits (90), Expect = 0.29, Method: Composition-based stats. Identities = 23/92 (25%), Positives = 42/92 (45%), Gaps = 6/92 (6%) Query: 101 IQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 + + E ++P+L + G GLNL + ++ WW+ +E R + G Sbjct: 713 VAAFQERQVPILLISLKAGGVGLNLT-AADTVIHLDPWWN-----PAVEEQATARAHRIG 766 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTIQD 192 + V VY LI + +I+E +L K+ + D Sbjct: 767 QTQTVLVYKLIVEGSIEERILALQARKAALAD 798 >gi|299822681|ref|ZP_07054567.1| Snf2 family helicase [Listeria grayi DSM 20601] gi|299816210|gb|EFI83448.1| Snf2 family helicase [Listeria grayi DSM 20601] Length = 1063 Score = 39.3 bits (90), Expect = 0.29, Method: Compositional matrix adjust. Identities = 31/138 (22%), Positives = 57/138 (41%), Gaps = 16/138 (11%) Query: 65 KANAAPIIVAYHFNSDLARLQKA---------FPQGRTLDKDPCT-IQEWNEGKIPLLFA 114 + N +++ F S L +Q + G+T K+ + +NEG + Sbjct: 904 RENGKRMLIFSQFTSMLGIIQSELKKIGMEYFYMDGQTPSKERVNLVNAFNEGGKDIFLI 963 Query: 115 HPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQN 174 + G GLNL + + + LWW+ +E +R + G K V V ++A+ Sbjct: 964 SLKAGGTGLNLTGADTV-ILYDLWWN-----PAVEEQAASRAHRIGQKNVVQVIRMVAKG 1017 Query: 175 TIDELVLQRLRTKSTIQD 192 TI+E + + K + D Sbjct: 1018 TIEERIFDLQKKKQALID 1035 >gi|218960404|ref|YP_001740179.1| hypothetical protein CLOAM0057 [Candidatus Cloacamonas acidaminovorans] gi|167729061|emb|CAO79972.1| hypothetical protein CLOAM0057 [Candidatus Cloacamonas acidaminovorans] Length = 1065 Score = 39.3 bits (90), Expect = 0.29, Method: Compositional matrix adjust. Identities = 41/163 (25%), Positives = 72/163 (44%), Gaps = 25/163 (15%) Query: 59 LEVIIEKANAA-PIIVAYHFNSDLARLQKA---------FPQGRTLDK-DPCTIQEWNEG 107 LE++ E NA +++ F L+ ++K + G+T D+ P E N Sbjct: 902 LELVTEATNAGHKVLIFSQFVQMLSIIRKVLEANSLPYCYLDGQTKDRVTPIKSFETNP- 960 Query: 108 KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFV 167 +I L + G GLNL + ++ + WW+ M+E + R + G V V Sbjct: 961 EIKLFLISLKAGGTGLNLT-AADTVILYDPWWN-----PMVENQAIDRTHRIGQTHKVQV 1014 Query: 168 YYLIAQNTIDELVLQRLRTKSTIQDL-------LLNALKKETI 203 + LI + T++E +LQ + K + + +L A+ KE I Sbjct: 1015 FRLITKGTVEEKILQLQQNKRELFETVIEGGQNVLKAMTKEDI 1057 >gi|158334343|ref|YP_001515515.1| SNF2 family helicase putative [Acaryochloris marina MBIC11017] gi|158304584|gb|ABW26201.1| helicase, SNF2 family, putative [Acaryochloris marina MBIC11017] Length = 1407 Score = 39.3 bits (90), Expect = 0.29, Method: Compositional matrix adjust. Identities = 24/78 (30%), Positives = 38/78 (48%), Gaps = 6/78 (7%) Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 G GLNL + ++ WW+ +E R + G +R V +Y L+A+NTI+E Sbjct: 1317 GTGLNL-TAADYVIHMDPWWN-----PAVEDQASDRAHRIGQRRPVTIYRLVAKNTIEEK 1370 Query: 180 VLQRLRTKSTIQDLLLNA 197 ++ R K + D LL Sbjct: 1371 IVDLHRHKRDLADSLLEG 1388 >gi|296418213|ref|XP_002838736.1| hypothetical protein [Tuber melanosporum Mel28] gi|295634697|emb|CAZ82927.1| unnamed protein product [Tuber melanosporum] Length = 1100 Score = 39.3 bits (90), Expect = 0.29, Method: Compositional matrix adjust. Identities = 26/98 (26%), Positives = 44/98 (44%), Gaps = 6/98 (6%) Query: 99 CTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQ 158 + +N G+ + + G GLNL I++F W + E Q V R + Sbjct: 966 SATKSFNSGRSDVFLVSTEAGGLGLNLPGANRIIIFDFKWSPMWEEQ------AVGRAYR 1019 Query: 159 AGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 G K+ VFVY A T ++L ++ KS +Q +++ Sbjct: 1020 MGQKKHVFVYRFHAVGTFEDLKRNKILFKSQLQSRVVD 1057 >gi|330916188|ref|XP_003297327.1| hypothetical protein PTT_07688 [Pyrenophora teres f. teres 0-1] gi|311330071|gb|EFQ94584.1| hypothetical protein PTT_07688 [Pyrenophora teres f. teres 0-1] Length = 1580 Score = 39.3 bits (90), Expect = 0.29, Method: Composition-based stats. Identities = 22/72 (30%), Positives = 39/72 (54%), Gaps = 6/72 (8%) Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 G G+NL +++F S W + Q M R + G ++ V VY L++++TI+E Sbjct: 843 GLGINLMTADTVVIFDSDWNPQADLQAM------ARAHRIGQQKPVSVYRLVSKDTIEEE 896 Query: 180 VLQRLRTKSTIQ 191 +L+R R K ++ Sbjct: 897 ILERARNKRMLE 908 >gi|189189128|ref|XP_001930903.1| chromo domain-containing protein 1 [Pyrenophora tritici-repentis Pt-1C-BFP] gi|187972509|gb|EDU40008.1| chromo domain-containing protein 1 [Pyrenophora tritici-repentis Pt-1C-BFP] Length = 1570 Score = 39.3 bits (90), Expect = 0.29, Method: Composition-based stats. Identities = 22/72 (30%), Positives = 39/72 (54%), Gaps = 6/72 (8%) Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 G G+NL +++F S W + Q M R + G ++ V VY L++++TI+E Sbjct: 833 GLGINLMTADTVVIFDSDWNPQADLQAM------ARAHRIGQQKPVSVYRLVSKDTIEEE 886 Query: 180 VLQRLRTKSTIQ 191 +L+R R K ++ Sbjct: 887 ILERARNKRMLE 898 >gi|115910510|ref|XP_795650.2| PREDICTED: similar to SD02886p [Strongylocentrotus purpuratus] gi|115960830|ref|XP_001193156.1| PREDICTED: similar to SD02886p [Strongylocentrotus purpuratus] Length = 1571 Score = 39.3 bits (90), Expect = 0.30, Method: Compositional matrix adjust. Identities = 25/74 (33%), Positives = 38/74 (51%), Gaps = 10/74 (13%) Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQM--IERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 G G+NL ++ + S W + Q M R+G T+Q V VY LI + TI+ Sbjct: 1253 GLGINLTAADTVIFYDSDWNPTVDQQAMDRAHRLGQTKQ--------VTVYRLICKGTIE 1304 Query: 178 ELVLQRLRTKSTIQ 191 E +L+R R KS ++ Sbjct: 1305 EHILERAREKSEVR 1318 >gi|118722509|gb|ABL09965.1| helicase [Streptomyces echinatus] Length = 1011 Score = 39.3 bits (90), Expect = 0.31, Method: Composition-based stats. Identities = 31/130 (23%), Positives = 59/130 (45%), Gaps = 11/130 (8%) Query: 72 IVAYHFNSDLARLQKAFPQGRT----LDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQY 127 ++A H + +L + F G T D+ QE ++ PLL + G GLNL Sbjct: 863 LLARHLSGELGLARVPFLHGGTPTEHRDRMVRAFQE-DDDAPPLLLISLKAGGFGLNLTR 921 Query: 128 GGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTK 187 +++ + WW+ +E R + G + V V+ L+ +T +E + L++K Sbjct: 922 ASHVM-HYDRWWN-----PAVEDQATDRAHRIGQTKTVLVHKLVTADTFEERIDALLQSK 975 Query: 188 STIQDLLLNA 197 ++ D ++ A Sbjct: 976 RSLADAVVGA 985 >gi|294674417|ref|YP_003575033.1| SNF2 helicase family protein [Prevotella ruminicola 23] gi|294472802|gb|ADE82191.1| SNF2 helicase family protein [Prevotella ruminicola 23] Length = 713 Score = 39.3 bits (90), Expect = 0.31, Method: Compositional matrix adjust. Identities = 29/113 (25%), Positives = 49/113 (43%), Gaps = 6/113 (5%) Query: 91 GRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 G T ++D Q ++ I + + G GLNL + + WW+ +E Sbjct: 599 GDTRNRDIPVRQFQSDSSITVFLISLKAGGFGLNLTSADRV-ILLDDWWN-----PAVED 652 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETI 203 + R + G K V V L+ ++T++E +LQ K DL N +K T+ Sbjct: 653 QAMARAHRIGQKNNVLVLRLVCKDTVEEKILQLQAQKRQTVDLFNNTSEKLTL 705 >gi|224136438|ref|XP_002326860.1| chromatin remodeling complex subunit [Populus trichocarpa] gi|222835175|gb|EEE73610.1| chromatin remodeling complex subunit [Populus trichocarpa] Length = 576 Score = 39.3 bits (90), Expect = 0.31, Method: Compositional matrix adjust. Identities = 19/68 (27%), Positives = 37/68 (54%), Gaps = 6/68 (8%) Query: 111 LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYL 170 +L A +C G+NL G + +V + W+ +ER ++R + G ++ V++Y+L Sbjct: 442 VLLASTRACSEGINL-VGASRVVLLDVLWN-----PSVERQAISRAYRLGQEKVVYIYHL 495 Query: 171 IAQNTIDE 178 I T++E Sbjct: 496 ITSGTMEE 503 >gi|50290001|ref|XP_447432.1| hypothetical protein [Candida glabrata CBS 138] gi|49526742|emb|CAG60369.1| unnamed protein product [Candida glabrata] Length = 942 Score = 39.3 bits (90), Expect = 0.31, Method: Compositional matrix adjust. Identities = 25/92 (27%), Positives = 44/92 (47%), Gaps = 6/92 (6%) Query: 106 EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 EG+ + + G G+NL G N L+ W+ QQ + R+ + G K+ Sbjct: 766 EGQEFIFLLSSKAGGCGINL-IGANRLILMDPDWNPAADQQALARVW-----RDGQKKDC 819 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 F+Y I+ TI+E + QR K ++ +++A Sbjct: 820 FIYRFISTGTIEEKIYQRQSMKMSLSSCVVDA 851 >gi|323454465|gb|EGB10335.1| hypothetical protein AURANDRAFT_52962 [Aureococcus anophagefferens] Length = 258 Score = 39.3 bits (90), Expect = 0.32, Method: Compositional matrix adjust. Identities = 25/69 (36%), Positives = 38/69 (55%), Gaps = 7/69 (10%) Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIA-QNTIDE 178 G G+NL G N +V F + W+ +R + R + G KR VFVY L+A + T++ Sbjct: 93 GEGINLT-GANRVVLFDVCWN-----PCFDRQAMCRAHRFGQKRPVFVYRLVAPRGTMEA 146 Query: 179 LVLQRLRTK 187 VL++ R K Sbjct: 147 KVLRQQRRK 155 >gi|290982366|ref|XP_002673901.1| predicted protein [Naegleria gruberi] gi|284087488|gb|EFC41157.1| predicted protein [Naegleria gruberi] Length = 873 Score = 39.3 bits (90), Expect = 0.32, Method: Compositional matrix adjust. Identities = 24/77 (31%), Positives = 39/77 (50%), Gaps = 6/77 (7%) Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 G GLNL G N L+ W+ +Q + R+ + G K++VF+Y +I TI+E Sbjct: 683 GCGLNL-IGANRLIMIDPDWNPSNDEQAMARVW-----RDGQKKSVFIYRMIGCGTIEEK 736 Query: 180 VLQRLRTKSTIQDLLLN 196 + QR K+ + L+ Sbjct: 737 IFQRQIVKTGLSKSTLD 753 >gi|255082185|ref|XP_002508311.1| SNF2 super family [Micromonas sp. RCC299] gi|226523587|gb|ACO69569.1| SNF2 super family [Micromonas sp. RCC299] Length = 1126 Score = 39.3 bits (90), Expect = 0.32, Method: Composition-based stats. Identities = 24/75 (32%), Positives = 40/75 (53%), Gaps = 6/75 (8%) Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 G G+NL GGN LV F W+ +Q R + G K+ ++Y +A +I+E Sbjct: 620 GCGINL-IGGNRLVLFDPDWNPANDKQ-----AAARCWRDGQKKKCYLYRFLATGSIEEK 673 Query: 180 VLQRLRTKSTIQDLL 194 V QR +K ++Q+++ Sbjct: 674 VFQRQLSKESLQNVV 688 >gi|281351942|gb|EFB27526.1| hypothetical protein PANDA_008144 [Ailuropoda melanoleuca] Length = 716 Score = 39.3 bits (90), Expect = 0.32, Method: Compositional matrix adjust. Identities = 23/77 (29%), Positives = 39/77 (50%), Gaps = 6/77 (7%) Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 G GLNL G N LV F W+ +Q + R+ + G K+ ++Y L++ TI+E Sbjct: 547 GCGLNL-IGANRLVMFDPDWNPANDEQAMARVW-----RDGQKKTCYIYRLLSAGTIEEK 600 Query: 180 VLQRLRTKSTIQDLLLN 196 + QR K + +++ Sbjct: 601 IFQRQSHKKALSSCVVD 617 >gi|225848989|ref|YP_002729153.1| helicase, Snf2 family [Sulfurihydrogenibium azorense Az-Fu1] gi|225644628|gb|ACN99678.1| helicase, Snf2 family [Sulfurihydrogenibium azorense Az-Fu1] Length = 561 Score = 39.3 bits (90), Expect = 0.32, Method: Compositional matrix adjust. Identities = 22/80 (27%), Positives = 44/80 (55%), Gaps = 6/80 (7%) Query: 117 ASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTI 176 + G GL L + ++FF L W+ + Q +R+ + G +AV +Y + +NT+ Sbjct: 462 TAAGEGLTLT-SSSYIIFFDLHWNPAKVWQAEDRV-----HRIGQTKAVNIYNFVTKNTV 515 Query: 177 DELVLQRLRTKSTIQDLLLN 196 +E ++Q+L K +I + L++ Sbjct: 516 EEKIIQKLEEKKSIINNLID 535 >gi|298528450|ref|ZP_07015854.1| SNF2-related protein [Desulfonatronospira thiodismutans ASO3-1] gi|298512102|gb|EFI36004.1| SNF2-related protein [Desulfonatronospira thiodismutans ASO3-1] Length = 1068 Score = 39.3 bits (90), Expect = 0.32, Method: Compositional matrix adjust. Identities = 26/101 (25%), Positives = 46/101 (45%), Gaps = 9/101 (8%) Query: 105 NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA 164 N IP+ + G GLNL + ++ + WW+ +E R + G + Sbjct: 964 NNPDIPVFLISLKAGGTGLNLT-AADYVIHYDPWWN-----PAVENQATDRTHRIGQTKQ 1017 Query: 165 VFVYYLIAQNTIDELVLQRLRTKSTIQDLLL---NALKKET 202 VF Y +I +NT++E +L+ K + + ++ NA K T Sbjct: 1018 VFSYKMICENTVEEKILKLQEQKKGVAEAVIPGQNAWKSLT 1058 >gi|260907213|ref|ZP_05915535.1| DNA/RNA helicase, superfamily II, SNF2 family protein [Brevibacterium linens BL2] Length = 1132 Score = 39.3 bits (90), Expect = 0.33, Method: Composition-based stats. Identities = 25/96 (26%), Positives = 44/96 (45%), Gaps = 6/96 (6%) Query: 101 IQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 I ++ G+ P+ + G GL L + + WW+ +E V R + G Sbjct: 1023 IDDFRAGEAPIFLISLKAGGFGLTLTEADYVFLL-DPWWN-----PAVEAQAVDRAHRIG 1076 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + V VY ++++ TI+E VL K+ + D L+N Sbjct: 1077 QTKNVMVYRMVSEKTIEEKVLALQERKAQLFDSLVN 1112 >gi|224058089|ref|XP_002191829.1| PREDICTED: RAD54-like (S. cerevisiae) [Taeniopygia guttata] Length = 757 Score = 39.3 bits (90), Expect = 0.33, Method: Compositional matrix adjust. Identities = 23/77 (29%), Positives = 39/77 (50%), Gaps = 6/77 (7%) Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 G GLNL G N LV F W+ +Q + R+ + G K+ ++Y L++ TI+E Sbjct: 590 GCGLNL-IGANRLVMFDPDWNPANDEQAMARVW-----RDGQKKMCYIYRLLSTGTIEEK 643 Query: 180 VLQRLRTKSTIQDLLLN 196 + QR K + +++ Sbjct: 644 IFQRQTHKKALSSCVVD 660 >gi|213404262|ref|XP_002172903.1| ATP-dependent DNA helicase Hrp3 [Schizosaccharomyces japonicus yFS275] gi|212000950|gb|EEB06610.1| ATP-dependent DNA helicase Hrp3 [Schizosaccharomyces japonicus yFS275] Length = 1356 Score = 39.3 bits (90), Expect = 0.33, Method: Compositional matrix adjust. Identities = 23/72 (31%), Positives = 37/72 (51%), Gaps = 6/72 (8%) Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 G G+NL +++F S W + Q M R + G K V VY ++++TI+E Sbjct: 767 GLGINLMTADTVIIFDSDWNPQADLQAM------ARAHRIGQKNHVMVYRFLSKDTIEED 820 Query: 180 VLQRLRTKSTIQ 191 VL+R R K ++ Sbjct: 821 VLERARRKMILE 832 >gi|260945000|ref|XP_002616798.1| hypothetical protein CLUG_04039 [Clavispora lusitaniae ATCC 42720] gi|238850447|gb|EEQ39911.1| hypothetical protein CLUG_04039 [Clavispora lusitaniae ATCC 42720] Length = 1259 Score = 39.3 bits (90), Expect = 0.33, Method: Compositional matrix adjust. Identities = 21/74 (28%), Positives = 39/74 (52%), Gaps = 6/74 (8%) Query: 118 SCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 + G G+NL +++F S W + Q M R + G K+ V VY ++++T++ Sbjct: 597 AGGLGINLMTADTVIIFDSDWNPQADLQAM------ARAHRIGQKKHVSVYRFVSKDTVE 650 Query: 178 ELVLQRLRTKSTIQ 191 E +L+R R K ++ Sbjct: 651 EEILERARKKMILE 664 >gi|210075955|ref|XP_504989.2| YALI0F04356p [Yarrowia lipolytica] gi|199424920|emb|CAG77796.2| YALI0F04356p [Yarrowia lipolytica] Length = 1242 Score = 39.3 bits (90), Expect = 0.33, Method: Composition-based stats. Identities = 24/98 (24%), Positives = 50/98 (51%), Gaps = 7/98 (7%) Query: 101 IQEWNEGKIPLLF-AHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQA 159 I +NE P +F + G G+NL ++++F S W ++ Q + R + Sbjct: 1070 IDAFNEESGPSIFLITTRAGGTGINLTAADSVVIFDSDWNPQQDKQ------AIDRSHRI 1123 Query: 160 GFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 G K+ +Y LI+ NT++E++++ K + ++++ A Sbjct: 1124 GQKKPCVIYRLISTNTMEEMLVRVASDKKRLDEMVIQA 1161 >gi|194207506|ref|XP_001915622.1| PREDICTED: similar to RAD54-like protein [Equus caballus] Length = 755 Score = 39.3 bits (90), Expect = 0.33, Method: Compositional matrix adjust. Identities = 23/77 (29%), Positives = 39/77 (50%), Gaps = 6/77 (7%) Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 G GLNL G N LV F W+ +Q + R+ + G K+ ++Y L++ TI+E Sbjct: 577 GCGLNL-IGANRLVMFDPDWNPANDEQAMARVW-----RDGQKKTCYIYRLLSAGTIEEK 630 Query: 180 VLQRLRTKSTIQDLLLN 196 + QR K + +++ Sbjct: 631 IFQRQSHKKALSSCVVD 647 >gi|110801800|ref|YP_698913.1| Snf2/Rad54 family helicase [Clostridium perfringens SM101] gi|110682301|gb|ABG85671.1| helicase, SNF2/RAD54 family [Clostridium perfringens SM101] Length = 1084 Score = 39.3 bits (90), Expect = 0.33, Method: Composition-based stats. Identities = 26/81 (32%), Positives = 40/81 (49%), Gaps = 6/81 (7%) Query: 101 IQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 + E+NEG+ + + G GLNL +I++ F WW+ +E R + G Sbjct: 967 VNEFNEGENSVFLISLKAGGTGLNLT-SADIVIHFDPWWN-----PAVENQATDRAHRMG 1020 Query: 161 FKRAVFVYYLIAQNTIDELVL 181 K V V LIA+ TI+E V+ Sbjct: 1021 QKNVVEVIKLIAKGTIEEKVV 1041 >gi|258514714|ref|YP_003190936.1| SNF2-related protein [Desulfotomaculum acetoxidans DSM 771] gi|257778419|gb|ACV62313.1| SNF2-related protein [Desulfotomaculum acetoxidans DSM 771] Length = 891 Score = 39.3 bits (90), Expect = 0.34, Method: Compositional matrix adjust. Identities = 40/146 (27%), Positives = 69/146 (47%), Gaps = 28/146 (19%) Query: 65 KANAAPIIVAYHFNSDLARLQK---------AFPQGRTLDKDPC--TIQEWNEGKIPLLF 113 +AN ++V F S L+ ++K + G T+ + + + +EG + F Sbjct: 739 QANHEKVVVFSQFTSMLSIMKKWAEEQGYATFYLDGATMKRQEVVDSFERSDEG---VFF 795 Query: 114 AHPASCGHGLNL---QYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYL 170 + G GLN+ QY + + WW+ Q +RI + G K+ VFVY+L Sbjct: 796 ISLKAGGVGLNIVSCQYA----IIYDPWWNPAVENQASDRI-----YRIGQKKNVFVYHL 846 Query: 171 IAQNTIDELVLQRLRT-KSTIQDLLL 195 + N+I+E + ++L+T K I D LL Sbjct: 847 VTANSIEEKI-EKLKTEKREIADNLL 871 >gi|297192312|ref|ZP_06909710.1| conserved hypothetical protein [Streptomyces pristinaespiralis ATCC 25486] gi|197719707|gb|EDY63615.1| conserved hypothetical protein [Streptomyces pristinaespiralis ATCC 25486] Length = 775 Score = 39.3 bits (90), Expect = 0.34, Method: Composition-based stats. Identities = 56/208 (26%), Positives = 85/208 (40%), Gaps = 44/208 (21%) Query: 10 ELYCDLQGENIEAFNSASKTVKCLQLANG-------AVYYDEEKHWKEVHDEKIKALEVI 62 EL LQ E E F++A +A+G A Y EK K E+++ L V Sbjct: 472 ELPSLLQVEEWEEFSAADAEAYREAVASGNFMAMRRAAYARPEKSAKL---ERLREL-VD 527 Query: 63 IEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIP------------ 110 AN ++V +F LA + +A +G P + G +P Sbjct: 528 DAAANGLKVVVFSYFRDVLAAVGEALDEGVF---GPVS------GSVPAARRQQLVDEFT 578 Query: 111 ------LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA 164 +L A + G GLNLQ +++ EHQ V R + G RA Sbjct: 579 AAPGHAVLLAQIEAGGVGLNLQAASVVIICEPQVKPTMEHQ------AVARAHRMGQVRA 632 Query: 165 VFVYYLIAQNTIDELVLQRLRTKSTIQD 192 V V+ L+A N++D+ +L L +KS + D Sbjct: 633 VQVHRLLATNSVDQRMLDILESKSRLFD 660 >gi|168217982|ref|ZP_02643607.1| helicase, SNF2/RAD54 family [Clostridium perfringens NCTC 8239] gi|182379962|gb|EDT77441.1| helicase, SNF2/RAD54 family [Clostridium perfringens NCTC 8239] Length = 1084 Score = 39.3 bits (90), Expect = 0.34, Method: Composition-based stats. Identities = 26/81 (32%), Positives = 40/81 (49%), Gaps = 6/81 (7%) Query: 101 IQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 + E+NEG+ + + G GLNL +I++ F WW+ +E R + G Sbjct: 967 VNEFNEGENSVFLISLKAGGTGLNLT-SADIVIHFDPWWN-----PAVENQATDRAHRMG 1020 Query: 161 FKRAVFVYYLIAQNTIDELVL 181 K V V LIA+ TI+E V+ Sbjct: 1021 QKNVVEVIKLIAKGTIEEKVV 1041 >gi|168213595|ref|ZP_02639220.1| helicase, SNF2/RAD54 family [Clostridium perfringens CPE str. F4969] gi|170714879|gb|EDT27061.1| helicase, SNF2/RAD54 family [Clostridium perfringens CPE str. F4969] Length = 1084 Score = 39.3 bits (90), Expect = 0.34, Method: Composition-based stats. Identities = 26/81 (32%), Positives = 40/81 (49%), Gaps = 6/81 (7%) Query: 101 IQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 + E+NEG+ + + G GLNL +I++ F WW+ +E R + G Sbjct: 967 VNEFNEGENSVFLISLKAGGTGLNLT-SADIVIHFDPWWN-----PAVENQATDRAHRMG 1020 Query: 161 FKRAVFVYYLIAQNTIDELVL 181 K V V LIA+ TI+E V+ Sbjct: 1021 QKNVVEVIKLIAKGTIEEKVV 1041 >gi|18310607|ref|NP_562541.1| helicase, SNF2/RAD54 family [Clostridium perfringens str. 13] gi|18145288|dbj|BAB81331.1| SWI/SNF family helicase [Clostridium perfringens str. 13] Length = 1084 Score = 39.3 bits (90), Expect = 0.34, Method: Composition-based stats. Identities = 26/81 (32%), Positives = 40/81 (49%), Gaps = 6/81 (7%) Query: 101 IQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 + E+NEG+ + + G GLNL +I++ F WW+ +E R + G Sbjct: 967 VNEFNEGENSVFLISLKAGGTGLNLT-SADIVIHFDPWWN-----PAVENQATDRAHRMG 1020 Query: 161 FKRAVFVYYLIAQNTIDELVL 181 K V V LIA+ TI+E V+ Sbjct: 1021 QKNVVEVIKLIAKGTIEEKVV 1041 >gi|307177261|gb|EFN66439.1| DNA repair and recombination protein RAD54B [Camponotus floridanus] Length = 845 Score = 39.3 bits (90), Expect = 0.34, Method: Compositional matrix adjust. Identities = 29/92 (31%), Positives = 48/92 (52%), Gaps = 8/92 (8%) Query: 105 NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA 164 + KI LL A G GLNL G + LV F W+ Q + RI + G K+ Sbjct: 661 DNSKILLLSAKAG--GVGLNLP-GASRLVLFDSDWNPASDVQAMARIW-----RDGQKKN 712 Query: 165 VFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 V++Y L+ TI+E + QR +K+++ + +++ Sbjct: 713 VYIYRLLTTGTIEEKIYQRQISKASLSESVVD 744 >gi|168207158|ref|ZP_02633163.1| helicase, SNF2/RAD54 family [Clostridium perfringens E str. JGS1987] gi|170661452|gb|EDT14135.1| helicase, SNF2/RAD54 family [Clostridium perfringens E str. JGS1987] Length = 1084 Score = 39.3 bits (90), Expect = 0.34, Method: Composition-based stats. Identities = 26/81 (32%), Positives = 40/81 (49%), Gaps = 6/81 (7%) Query: 101 IQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 + E+NEG+ + + G GLNL +I++ F WW+ +E R + G Sbjct: 967 VNEFNEGENSVFLISLKAGGTGLNLT-SADIVIHFDPWWN-----PAVENQATDRAHRMG 1020 Query: 161 FKRAVFVYYLIAQNTIDELVL 181 K V V LIA+ TI+E V+ Sbjct: 1021 QKNVVEVIKLIAKGTIEEKVV 1041 >gi|182416600|ref|ZP_02948017.1| SWF/SNF family helicase [Clostridium butyricum 5521] gi|237669036|ref|ZP_04529020.1| Non-specific serine/threonine protein kinase [Clostridium butyricum E4 str. BoNT E BL5262] gi|182379558|gb|EDT77042.1| SWF/SNF family helicase [Clostridium butyricum 5521] gi|237657384|gb|EEP54940.1| Non-specific serine/threonine protein kinase [Clostridium butyricum E4 str. BoNT E BL5262] Length = 1077 Score = 39.3 bits (90), Expect = 0.34, Method: Composition-based stats. Identities = 27/96 (28%), Positives = 45/96 (46%), Gaps = 6/96 (6%) Query: 101 IQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 + E+N+G + + G GLNL +I++ F WW+ +E R + G Sbjct: 966 VNEFNDGNKNIFLISLKAGGTGLNLT-SADIVIHFDPWWN-----PAVEDQATDRAHRLG 1019 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 K V V LIA TI+E ++ +K + D +L+ Sbjct: 1020 QKNVVEVIKLIASGTIEEKIIDLQNSKRELIDKVLS 1055 >gi|110800752|ref|YP_696312.1| Snf2/Rad54 family helicase [Clostridium perfringens ATCC 13124] gi|110675399|gb|ABG84386.1| helicase, SNF2/RAD54 family [Clostridium perfringens ATCC 13124] Length = 1084 Score = 39.3 bits (90), Expect = 0.34, Method: Composition-based stats. Identities = 26/81 (32%), Positives = 40/81 (49%), Gaps = 6/81 (7%) Query: 101 IQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 + E+NEG+ + + G GLNL +I++ F WW+ +E R + G Sbjct: 967 VNEFNEGENSVFLISLKAGGTGLNLT-SADIVIHFDPWWN-----PAVENQATDRAHRMG 1020 Query: 161 FKRAVFVYYLIAQNTIDELVL 181 K V V LIA+ TI+E V+ Sbjct: 1021 QKNVVEVIKLIAKGTIEEKVV 1041 >gi|190347873|gb|EDK40225.2| hypothetical protein PGUG_04323 [Meyerozyma guilliermondii ATCC 6260] Length = 1367 Score = 39.3 bits (90), Expect = 0.34, Method: Compositional matrix adjust. Identities = 22/74 (29%), Positives = 38/74 (51%), Gaps = 6/74 (8%) Query: 118 SCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 + G G+NL +++F S W + Q M R + G K V VY ++++TI+ Sbjct: 721 AGGLGINLMTADTVIIFDSDWNPQADLQAM------ARAHRIGQKNHVSVYRFVSKDTIE 774 Query: 178 ELVLQRLRTKSTIQ 191 E +L+R R K ++ Sbjct: 775 EEILERARKKMILE 788 >gi|67969780|dbj|BAE01238.1| unnamed protein product [Macaca fascicularis] Length = 489 Score = 39.3 bits (90), Expect = 0.35, Method: Compositional matrix adjust. Identities = 23/77 (29%), Positives = 39/77 (50%), Gaps = 6/77 (7%) Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 G GLNL G N LV F W+ +Q + R+ + G K+ ++Y L++ TI+E Sbjct: 319 GCGLNL-IGANRLVMFDPDWNPANDEQAMARVW-----RDGQKKTCYIYRLLSAGTIEEK 372 Query: 180 VLQRLRTKSTIQDLLLN 196 + QR K + +++ Sbjct: 373 IFQRQSHKKALSSCVVD 389 >gi|312086053|ref|XP_003144925.1| hypothetical protein LOAG_09349 [Loa loa] gi|307759908|gb|EFO19142.1| hypothetical protein LOAG_09349 [Loa loa] Length = 223 Score = 39.3 bits (90), Expect = 0.35, Method: Compositional matrix adjust. Identities = 27/78 (34%), Positives = 41/78 (52%), Gaps = 6/78 (7%) Query: 117 ASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTI 176 A+ G GLNL G + ++ F W+ Q++ RI RQ G K +Y LI T+ Sbjct: 4 ATGGLGLNL-VGASRMILFDSDWNPAVDMQVMARI----WRQ-GQKSPCHIYRLITGGTV 57 Query: 177 DELVLQRLRTKSTIQDLL 194 DE +LQR KS++ ++ Sbjct: 58 DEKILQRQIKKSSLNTVV 75 >gi|303389620|ref|XP_003073042.1| Snf2/Rad54-like helicase [Encephalitozoon intestinalis ATCC 50506] gi|303302186|gb|ADM11682.1| Snf2/Rad54-like helicase [Encephalitozoon intestinalis ATCC 50506] Length = 556 Score = 39.3 bits (90), Expect = 0.35, Method: Compositional matrix adjust. Identities = 32/95 (33%), Positives = 47/95 (49%), Gaps = 8/95 (8%) Query: 100 TIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQA 159 + QE E K LL +C GL L G +VF L+W+ Q +RI + Sbjct: 442 SFQENEEIKTALL--SITACSTGLTLT-AGRAVVFAELYWNPGVLLQAEDRI-----HRI 493 Query: 160 GFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 G K +V + YL+A+ TIDE V +L +K + + L Sbjct: 494 GQKNSVDIIYLVARGTIDEYVWPKLLSKLNVLESL 528 >gi|330840007|ref|YP_004414587.1| SNF2-related protein [Selenomonas sputigena ATCC 35185] gi|329747771|gb|AEC01128.1| SNF2-related protein [Selenomonas sputigena ATCC 35185] Length = 1091 Score = 39.3 bits (90), Expect = 0.35, Method: Compositional matrix adjust. Identities = 37/153 (24%), Positives = 67/153 (43%), Gaps = 18/153 (11%) Query: 55 KIKALEVIIEKANAAP--IIVAYHFNS---------DLARLQKAFPQGRTLDKDPCT-IQ 102 K+ LE ++ A AA I++ F + D+ L A+ G T + ++ Sbjct: 925 KLDMLEEVVADAVAAGHRILIFSQFTTMLSHIAARLDVMNLSYAYLDGSTPALERMRRVR 984 Query: 103 EWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFK 162 ++N G PL + G GLNL G ++++ + WW+ +E R + G K Sbjct: 985 DFNAGAEPLFLISLKAGGTGLNLT-GADMVIHYDPWWN-----PAVEDQATDRAYRIGQK 1038 Query: 163 RAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 V V I ++TI+E + + K + D ++ Sbjct: 1039 NNVQVLKFITKDTIEEKIYELQEKKKALIDQMI 1071 >gi|156399887|ref|XP_001638732.1| predicted protein [Nematostella vectensis] gi|156225855|gb|EDO46669.1| predicted protein [Nematostella vectensis] Length = 911 Score = 39.3 bits (90), Expect = 0.35, Method: Compositional matrix adjust. Identities = 22/79 (27%), Positives = 41/79 (51%), Gaps = 12/79 (15%) Query: 120 GHGLNLQYGGNILVFFSLW---WDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTI 176 G GLNL ++++ S W DL+ Q RIG T+ + VY L+ NT+ Sbjct: 761 GLGLNLSAADTVIIYDSDWNPQSDLQ-AQDRCHRIGQTK--------PILVYRLVTSNTV 811 Query: 177 DELVLQRLRTKSTIQDLLL 195 D+ +++R +K ++ +++ Sbjct: 812 DQKIVERAASKRKLEKMVI 830 >gi|224543399|ref|ZP_03683938.1| hypothetical protein CATMIT_02600 [Catenibacterium mitsuokai DSM 15897] gi|224523686|gb|EEF92791.1| hypothetical protein CATMIT_02600 [Catenibacterium mitsuokai DSM 15897] Length = 856 Score = 39.3 bits (90), Expect = 0.36, Method: Compositional matrix adjust. Identities = 23/87 (26%), Positives = 42/87 (48%), Gaps = 6/87 (6%) Query: 109 IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVY 168 +P + + G GLNL N ++ F WW+ +E R + G + VFV+ Sbjct: 752 VPYIVLSLKAAGTGLNLT-AANHVIHFDRWWN-----PAVENQASDRAYRIGQTKEVFVH 805 Query: 169 YLIAQNTIDELVLQRLRTKSTIQDLLL 195 L++ TI+E + Q + +K + + +L Sbjct: 806 KLVSNGTIEEKINQIIESKQELAESIL 832 >gi|309388673|gb|ADO76553.1| SNF2-related protein [Halanaerobium praevalens DSM 2228] Length = 1082 Score = 39.3 bits (90), Expect = 0.36, Method: Compositional matrix adjust. Identities = 28/100 (28%), Positives = 49/100 (49%), Gaps = 10/100 (10%) Query: 101 IQEWNEG-KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQA 159 ++E+N ++ + + G GLNL +++V WW+ M+ER R + Sbjct: 967 VKEFNNNCEVKIFLISLKAGGVGLNLT-AADMVVHVDPWWN-----PMVERQATDRAHRL 1020 Query: 160 GFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 G + V VY LI + T++E +L+ K QDL N ++ Sbjct: 1021 GQQNRVMVYKLITRGTVEEKMLKLQERK---QDLFNNVIE 1057 >gi|119897130|ref|YP_932343.1| SWI/SNF family helicase [Azoarcus sp. BH72] gi|119669543|emb|CAL93456.1| SWI/SNF family helicase [Azoarcus sp. BH72] Length = 1098 Score = 39.3 bits (90), Expect = 0.36, Method: Composition-based stats. Identities = 26/104 (25%), Positives = 49/104 (47%), Gaps = 10/104 (9%) Query: 101 IQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 ++++ +G+ P+ + G GLNL + ++ + WW+ Q + R + G Sbjct: 985 VEDFQKGRAPVFLISLKAGGVGLNLT-TADTVIHYDPWWNPAAENQATD-----RAHRIG 1038 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL----NALKK 200 + VFV+ LI +I+E +L K+ + +L NAL K Sbjct: 1039 QDKPVFVFKLICAGSIEERILSLQDKKAALAASVLSEDANALAK 1082 >gi|328711442|ref|XP_001943462.2| PREDICTED: DNA repair and recombination protein RAD54B-like [Acyrthosiphon pisum] Length = 842 Score = 39.3 bits (90), Expect = 0.37, Method: Compositional matrix adjust. Identities = 24/87 (27%), Positives = 42/87 (48%), Gaps = 6/87 (6%) Query: 111 LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYL 170 +L + G GLNL N++++ S W + Q M R + G K+ V +Y L Sbjct: 662 VLLLSAKAGGVGLNLVGASNLILYDSDWNPASDQQAM------ARIWRDGQKKNVHIYRL 715 Query: 171 IAQNTIDELVLQRLRTKSTIQDLLLNA 197 + TI+E + QR +K+ + + + N Sbjct: 716 LTSGTIEEKIFQRQISKTGLSEAITNP 742 >gi|308511103|ref|XP_003117734.1| hypothetical protein CRE_00333 [Caenorhabditis remanei] gi|308238380|gb|EFO82332.1| hypothetical protein CRE_00333 [Caenorhabditis remanei] Length = 3156 Score = 39.3 bits (90), Expect = 0.37, Method: Composition-based stats. Identities = 26/80 (32%), Positives = 40/80 (50%), Gaps = 6/80 (7%) Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 G GLNLQ +++F S W HQ M + R + G K V V+ LI N+++E Sbjct: 1964 GLGLNLQTADTVIIFDSDW---NPHQDMQAQ---DRAHRIGQKAEVRVFRLITSNSVEEK 2017 Query: 180 VLQRLRTKSTIQDLLLNALK 199 +L R K + + ++ A K Sbjct: 2018 ILASARFKLNVDEKVIQAGK 2037 >gi|308175364|ref|YP_003922069.1| ATP-binding SNF2 helicase or protein kinase [Bacillus amyloliquefaciens DSM 7] gi|307608228|emb|CBI44599.1| putative ATP-binding SNF2 helicase or protein kinase [Bacillus amyloliquefaciens DSM 7] Length = 924 Score = 39.3 bits (90), Expect = 0.37, Method: Compositional matrix adjust. Identities = 26/97 (26%), Positives = 46/97 (47%), Gaps = 6/97 (6%) Query: 101 IQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 ++ + + + P L + G GLNL N ++ + WW+ +E R + G Sbjct: 809 VERFQKKEYPTLILSLKAGGTGLNLTA-ANHVIHYDRWWN-----PAVENQATDRAYRIG 862 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 +R V V+ LI TI+E + L TK T+ D ++ + Sbjct: 863 QERFVHVHKLITTGTIEEKIDAMLETKQTLNDQIIQS 899 >gi|168209303|ref|ZP_02634928.1| helicase, SNF2/RAD54 family [Clostridium perfringens B str. ATCC 3626] gi|170712526|gb|EDT24708.1| helicase, SNF2/RAD54 family [Clostridium perfringens B str. ATCC 3626] Length = 1084 Score = 39.3 bits (90), Expect = 0.37, Method: Composition-based stats. Identities = 26/81 (32%), Positives = 40/81 (49%), Gaps = 6/81 (7%) Query: 101 IQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 + E+NEG+ + + G GLNL +I++ F WW+ +E R + G Sbjct: 967 VNEFNEGENSVFLISLKAGGTGLNLT-SADIVIHFDPWWN-----PAVENQATDRAHRMG 1020 Query: 161 FKRAVFVYYLIAQNTIDELVL 181 K V V LIA+ TI+E V+ Sbjct: 1021 QKNVVEVIKLIAKGTIEEKVV 1041 >gi|66362430|ref|XP_628179.1| CHD3 ortholog with 2x chromodomains plus SNF2 ATpase (2chromo+helicase+Znf_NFX) [Cryptosporidium parvum Iowa II] gi|46227356|gb|EAK88291.1| CHD3 ortholog with 2x chromodomains plus SNF2 ATpase (2chromo+helicase+Znf_NFX) [Cryptosporidium parvum Iowa II] Length = 2055 Score = 39.3 bits (90), Expect = 0.37, Method: Compositional matrix adjust. Identities = 21/79 (26%), Positives = 41/79 (51%), Gaps = 6/79 (7%) Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 G G+NL ++++ S W + Q R + G K+ V +Y L+ +++I+E Sbjct: 952 GLGINLTTADTVIIYDSDWNPQNDLQ------AEARAHRIGQKKQVQIYRLVTKDSIEEN 1005 Query: 180 VLQRLRTKSTIQDLLLNAL 198 +L+R +TK + L++ L Sbjct: 1006 ILERAKTKMVLDTLVVQGL 1024 >gi|328555338|gb|AEB25830.1| ATP-binding SNF2 helicase or protein kinase [Bacillus amyloliquefaciens TA208] gi|328913706|gb|AEB65302.1| putative ATP-binding SNF2 helicase or protein kinase [Bacillus amyloliquefaciens LL3] Length = 924 Score = 38.9 bits (89), Expect = 0.38, Method: Compositional matrix adjust. Identities = 26/97 (26%), Positives = 46/97 (47%), Gaps = 6/97 (6%) Query: 101 IQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 ++ + + + P L + G GLNL N ++ + WW+ +E R + G Sbjct: 809 VERFQKKEYPTLILSLKAGGTGLNLTA-ANHVIHYDRWWN-----PAVENQATDRAYRIG 862 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 +R V V+ LI TI+E + L TK T+ D ++ + Sbjct: 863 QERFVHVHKLITTGTIEEKIDAMLETKQTLNDQIIQS 899 >gi|169342801|ref|ZP_02863835.1| helicase, SNF2/RAD54 family [Clostridium perfringens C str. JGS1495] gi|169299058|gb|EDS81130.1| helicase, SNF2/RAD54 family [Clostridium perfringens C str. JGS1495] Length = 1084 Score = 38.9 bits (89), Expect = 0.38, Method: Composition-based stats. Identities = 26/81 (32%), Positives = 40/81 (49%), Gaps = 6/81 (7%) Query: 101 IQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 + E+NEG+ + + G GLNL +I++ F WW+ +E R + G Sbjct: 967 VNEFNEGENSVFLISLKAGGTGLNLT-SADIVIHFDPWWN-----PAVENQATDRAHRIG 1020 Query: 161 FKRAVFVYYLIAQNTIDELVL 181 K V V LIA+ TI+E V+ Sbjct: 1021 QKNVVEVIKLIAKGTIEEKVV 1041 >gi|146415248|ref|XP_001483594.1| hypothetical protein PGUG_04323 [Meyerozyma guilliermondii ATCC 6260] Length = 1367 Score = 38.9 bits (89), Expect = 0.38, Method: Compositional matrix adjust. Identities = 22/74 (29%), Positives = 38/74 (51%), Gaps = 6/74 (8%) Query: 118 SCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 + G G+NL +++F S W + Q M R + G K V VY ++++TI+ Sbjct: 721 AGGLGINLMTADTVIIFDSDWNPQADLQAM------ARAHRIGQKNHVSVYRFVSKDTIE 774 Query: 178 ELVLQRLRTKSTIQ 191 E +L+R R K ++ Sbjct: 775 EEILERARKKMILE 788 >gi|260888136|ref|ZP_05899399.1| helicase, Snf2 family [Selenomonas sputigena ATCC 35185] gi|260862165|gb|EEX76665.1| helicase, Snf2 family [Selenomonas sputigena ATCC 35185] Length = 1098 Score = 38.9 bits (89), Expect = 0.38, Method: Compositional matrix adjust. Identities = 37/153 (24%), Positives = 67/153 (43%), Gaps = 18/153 (11%) Query: 55 KIKALEVIIEKANAAP--IIVAYHFNS---------DLARLQKAFPQGRTLDKDPCT-IQ 102 K+ LE ++ A AA I++ F + D+ L A+ G T + ++ Sbjct: 932 KLDMLEEVVADAVAAGHRILIFSQFTTMLSHIAARLDVMNLSYAYLDGSTPALERMRRVR 991 Query: 103 EWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFK 162 ++N G PL + G GLNL G ++++ + WW+ +E R + G K Sbjct: 992 DFNAGAEPLFLISLKAGGTGLNLT-GADMVIHYDPWWN-----PAVEDQATDRAYRIGQK 1045 Query: 163 RAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 V V I ++TI+E + + K + D ++ Sbjct: 1046 NNVQVLKFITKDTIEEKIYELQEKKKALIDQMI 1078 >gi|260941370|ref|XP_002614851.1| hypothetical protein CLUG_04866 [Clavispora lusitaniae ATCC 42720] gi|238851274|gb|EEQ40738.1| hypothetical protein CLUG_04866 [Clavispora lusitaniae ATCC 42720] Length = 885 Score = 38.9 bits (89), Expect = 0.38, Method: Composition-based stats. Identities = 35/120 (29%), Positives = 51/120 (42%), Gaps = 9/120 (7%) Query: 77 FNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFS 136 N RL + P + DK + KI LL A G GLNL G + L+ F Sbjct: 669 LNLQYCRLDGSTP-AKVRDKLVLDFNKCPTHKIFLLSAKAG--GVGLNL-VGASRLILFD 724 Query: 137 LWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 W+ Q + R+ + G + VF+Y L IDE + QR K+ + D+ L+ Sbjct: 725 NDWNPSVDLQAMARV-----HRYGQTKPVFIYRLFTTGAIDEKIFQRQLMKNNLSDMFLD 779 >gi|157128256|ref|XP_001661368.1| hypothetical protein AaeL_AAEL002341 [Aedes aegypti] gi|108882255|gb|EAT46480.1| conserved hypothetical protein [Aedes aegypti] Length = 851 Score = 38.9 bits (89), Expect = 0.38, Method: Compositional matrix adjust. Identities = 41/153 (26%), Positives = 66/153 (43%), Gaps = 26/153 (16%) Query: 59 LEVIIEKANAAPIIVAY------------HFNSDLARLQKAFPQGRTLDKDPCTI-QEWN 105 LE +I++ A I+ Y H+N RL G T +D C I +N Sbjct: 584 LETLIQRQEKAVIVSYYGKTLDMIMGLCEHYNYKYCRLD-----GSTPSQDRCKIVSSFN 638 Query: 106 E-GKIPLLFAHPASCGH-GLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKR 163 +F A G GLNL G + L+ + W+ Q + RI + G R Sbjct: 639 SPSSDTFIFLLSAKAGGIGLNLT-GASRLILYDNDWNPASDLQAMSRIW-----RDGQTR 692 Query: 164 AVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 VF+Y LI +I+E + QR +K+++ +++ Sbjct: 693 NVFIYRLITAFSIEEKIYQRQISKTSLSGTVVD 725 >gi|239986923|ref|ZP_04707587.1| SNF2/RAD54 family helicase [Streptomyces roseosporus NRRL 11379] Length = 914 Score = 38.9 bits (89), Expect = 0.38, Method: Composition-based stats. Identities = 21/97 (21%), Positives = 45/97 (46%), Gaps = 6/97 (6%) Query: 101 IQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 + + ++P+ + G GLNL ++ V F WW+ +E R + G Sbjct: 801 VDRFQSAEVPVFLLSLKAAGTGLNLTRAAHV-VHFDRWWN-----PAVEEQATDRAYRIG 854 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + V V+ +I + T+++ + + L +K + D +L + Sbjct: 855 QTQPVQVHRIITEGTVEDRIAELLESKRALADAVLGS 891 >gi|239940441|ref|ZP_04692378.1| SNF2/RAD54 family helicase [Streptomyces roseosporus NRRL 15998] gi|291443871|ref|ZP_06583261.1| SNF2/RAD54 family helicase [Streptomyces roseosporus NRRL 15998] gi|291346818|gb|EFE73722.1| SNF2/RAD54 family helicase [Streptomyces roseosporus NRRL 15998] Length = 1006 Score = 38.9 bits (89), Expect = 0.38, Method: Composition-based stats. Identities = 21/97 (21%), Positives = 45/97 (46%), Gaps = 6/97 (6%) Query: 101 IQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 + + ++P+ + G GLNL ++ V F WW+ +E R + G Sbjct: 893 VDRFQSAEVPVFLLSLKAAGTGLNLTRAAHV-VHFDRWWN-----PAVEEQATDRAYRIG 946 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + V V+ +I + T+++ + + L +K + D +L + Sbjct: 947 QTQPVQVHRIITEGTVEDRIAELLESKRALADAVLGS 983 >gi|17551114|ref|NP_508736.1| hypothetical protein C52B9.8 [Caenorhabditis elegans] gi|13775404|gb|AAK39219.1| Hypothetical protein C52B9.8 [Caenorhabditis elegans] Length = 1336 Score = 38.9 bits (89), Expect = 0.38, Method: Compositional matrix adjust. Identities = 27/89 (30%), Positives = 41/89 (46%), Gaps = 6/89 (6%) Query: 111 LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYL 170 L + G GLNLQ +++F S W HQ M R + G K V V+ L Sbjct: 754 LFMLSTRAGGLGLNLQTADTVIIFDSDW---NPHQDM---QAQDRAHRIGQKAEVRVFRL 807 Query: 171 IAQNTIDELVLQRLRTKSTIQDLLLNALK 199 I N+++E +L R K + + ++ A K Sbjct: 808 ITANSVEEKILAAARYKLNVDEKVIQAGK 836 >gi|308491646|ref|XP_003108014.1| hypothetical protein CRE_12565 [Caenorhabditis remanei] gi|308249961|gb|EFO93913.1| hypothetical protein CRE_12565 [Caenorhabditis remanei] Length = 1375 Score = 38.9 bits (89), Expect = 0.38, Method: Compositional matrix adjust. Identities = 30/103 (29%), Positives = 46/103 (44%), Gaps = 6/103 (5%) Query: 97 DPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 D T+ + K L + G GLNLQ +++F S W HQ M R Sbjct: 906 DLLTLYNAPDSKYFLFMLSTRAGGLGLNLQTADTVIIFDSDW---NPHQDM---QAQDRA 959 Query: 157 RQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 + G K+ V V LI N+++E +L R K + + ++ A K Sbjct: 960 HRIGQKKEVRVLRLITANSVEEKILAAARYKLNVDEKVIQAGK 1002 >gi|198437252|ref|XP_002124935.1| PREDICTED: similar to transcription termination factor, RNA polymerase II [Ciona intestinalis] Length = 1071 Score = 38.9 bits (89), Expect = 0.39, Method: Compositional matrix adjust. Identities = 23/63 (36%), Positives = 34/63 (53%), Gaps = 6/63 (9%) Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 G GLNL GGN L + W+ +Q +RI + G K+ VFV+ I + T++E Sbjct: 980 GVGLNL-IGGNHLFLLDMHWNPALEKQAFDRI-----YRVGQKKEVFVHKFIMEETVEEQ 1033 Query: 180 VLQ 182 +LQ Sbjct: 1034 ILQ 1036 >gi|256080936|ref|XP_002576731.1| DNA repair and recombination protein rad54-related [Schistosoma mansoni] gi|242318369|emb|CAZ32968.2| DNA repair and recombination protein rad54-related [Schistosoma mansoni] Length = 832 Score = 38.9 bits (89), Expect = 0.39, Method: Compositional matrix adjust. Identities = 25/77 (32%), Positives = 39/77 (50%), Gaps = 6/77 (7%) Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 G GLNL G N LV F W+ Q + R+ + G K+ ++Y LI+ TI+E Sbjct: 664 GCGLNL-IGANRLVMFDPDWNPANDDQAMARVW-----RDGQKKQCYIYRLISTGTIEEK 717 Query: 180 VLQRLRTKSTIQDLLLN 196 +LQR K + +++ Sbjct: 718 MLQRQAHKKALSSCVVD 734 >gi|326670150|ref|XP_689596.5| PREDICTED: hypothetical protein LOC553504 [Danio rerio] Length = 1269 Score = 38.9 bits (89), Expect = 0.39, Method: Compositional matrix adjust. Identities = 31/107 (28%), Positives = 51/107 (47%), Gaps = 8/107 (7%) Query: 91 GRTLDKDPCTI-QEWNEGK-IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMI 148 G T KD I +E+N + + L + G GLN G N++V F W+ Q I Sbjct: 490 GNTKSKDRVKIVKEFNSSRDVNLCLVSTLAGGLGLNF-IGANVVVLFDPTWNPANDLQAI 548 Query: 149 ERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 +R+ + G R V V+ LI+ T++E++ R K +Q ++ Sbjct: 549 DRV-----YRIGQCRDVTVFRLISLGTVEEIIYLRQVYKQQLQSSVI 590 >gi|238878261|gb|EEQ41899.1| DNA repair and recombination protein RAD54 [Candida albicans WO-1] Length = 848 Score = 38.9 bits (89), Expect = 0.39, Method: Compositional matrix adjust. Identities = 25/98 (25%), Positives = 46/98 (46%), Gaps = 8/98 (8%) Query: 101 IQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQ 158 + ++N+ P + + G G+NL G N LV W+ QQ + R+ + Sbjct: 665 VDKFNDPNGPEFIFLLSSKAGGCGINL-IGANRLVLMDPDWNPASDQQALARVW-----R 718 Query: 159 AGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 G K+ F+Y I+ TI+E + QR K ++ +++ Sbjct: 719 DGQKKDCFIYRFISTGTIEEKIFQRQSMKMSLSSCVVD 756 >gi|58263400|ref|XP_569110.1| hypothetical protein CNB01040 [Cryptococcus neoformans var. neoformans JEC21] gi|57223760|gb|AAW41803.1| hypothetical protein CNB01040 [Cryptococcus neoformans var. neoformans JEC21] Length = 1277 Score = 38.9 bits (89), Expect = 0.39, Method: Compositional matrix adjust. Identities = 39/149 (26%), Positives = 66/149 (44%), Gaps = 21/149 (14%) Query: 59 LEVIIEKANAAPIIVAYHFNS--DLARL---QKAFPQGRTL-----DKDPCTIQEWN--- 105 ++ IIE+ + IIV F DL + ++ P + + D+ TI+++N Sbjct: 1104 IDAIIEQDPSQKIIVFSQFVEYIDLCSIFLRRRNIPHAKYVGSMKQDEREDTIKDFNRPM 1163 Query: 106 -EGKIPLLFAHPASCGH-GLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKR 163 E K P CG GLNL +++ W E+Q V R + G R Sbjct: 1164 EEDKSPRCLLMSLKCGGVGLNLCIANHVICLDLAWNAATENQ------AVDRAHRIGQTR 1217 Query: 164 AVFVYYLIAQNTIDELVLQRLRTKSTIQD 192 V V+ L+ +NTID+ +++ + K + D Sbjct: 1218 EVVVHRLVVENTIDQRLMELQQQKQALSD 1246 >gi|284040459|ref|YP_003390389.1| SNF2-related protein [Spirosoma linguale DSM 74] gi|283819752|gb|ADB41590.1| SNF2-related protein [Spirosoma linguale DSM 74] Length = 1185 Score = 38.9 bits (89), Expect = 0.40, Method: Compositional matrix adjust. Identities = 24/76 (31%), Positives = 38/76 (50%), Gaps = 6/76 (7%) Query: 118 SCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 + G GLNL N ++ F LWW+ +E R + G + V VY L+ Q T++ Sbjct: 1092 AGGTGLNLTQA-NHVIHFDLWWN-----PAVESQATDRAFRIGQTKNVMVYRLMNQGTLE 1145 Query: 178 ELVLQRLRTKSTIQDL 193 E + +R+K + DL Sbjct: 1146 EKIDAMIRSKRELADL 1161 >gi|296131142|ref|YP_003638392.1| SNF2-related protein [Cellulomonas flavigena DSM 20109] gi|296022957|gb|ADG76193.1| SNF2-related protein [Cellulomonas flavigena DSM 20109] Length = 1096 Score = 38.9 bits (89), Expect = 0.40, Method: Composition-based stats. Identities = 31/114 (27%), Positives = 47/114 (41%), Gaps = 7/114 (6%) Query: 82 ARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDL 141 A L + GRT + + + G PL + G GLNL + + WW+ Sbjct: 968 AGLAYEYLDGRTRRRGD-VVDRFRTGSAPLFLVSLRAGGFGLNLTEA-DYVYLLDPWWNP 1025 Query: 142 EEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 QQ ++R + G R V V L+A TI+E V+ K + D +L Sbjct: 1026 AVEQQAVDR-----THRIGQDRKVMVNRLVAAGTIEEKVMALAARKRAVFDAVL 1074 >gi|124481796|gb|AAI33116.1| LOC553504 protein [Danio rerio] Length = 1105 Score = 38.9 bits (89), Expect = 0.40, Method: Compositional matrix adjust. Identities = 31/107 (28%), Positives = 51/107 (47%), Gaps = 8/107 (7%) Query: 91 GRTLDKDPCTI-QEWNEGK-IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMI 148 G T KD I +E+N + + L + G GLN G N++V F W+ Q I Sbjct: 488 GNTKSKDRVKIVKEFNSSRDVNLCLVSTLAGGLGLNF-IGANVVVLFDPTWNPANDLQAI 546 Query: 149 ERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 +R+ + G R V V+ LI+ T++E++ R K +Q ++ Sbjct: 547 DRV-----YRIGQCRDVTVFRLISLGTVEEIIYLRQVYKQQLQSSVI 588 >gi|61402625|gb|AAH91795.1| LOC553504 protein [Danio rerio] Length = 1069 Score = 38.9 bits (89), Expect = 0.40, Method: Compositional matrix adjust. Identities = 31/107 (28%), Positives = 51/107 (47%), Gaps = 8/107 (7%) Query: 91 GRTLDKDPCTI-QEWNEGK-IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMI 148 G T KD I +E+N + + L + G GLN G N++V F W+ Q I Sbjct: 488 GNTKSKDRVKIVKEFNSSRDVNLCLVSTLAGGLGLNF-IGANVVVLFDPTWNPANDLQAI 546 Query: 149 ERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 +R+ + G R V V+ LI+ T++E++ R K +Q ++ Sbjct: 547 DRV-----YRIGQCRDVTVFRLISLGTVEEIIYLRQVYKQQLQSSVI 588 >gi|321468014|gb|EFX79001.1| hypothetical protein DAPPUDRAFT_319936 [Daphnia pulex] Length = 547 Score = 38.9 bits (89), Expect = 0.41, Method: Compositional matrix adjust. Identities = 35/142 (24%), Positives = 63/142 (44%), Gaps = 23/142 (16%) Query: 51 VHDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEW---- 104 V + + AL++I E NA+ + ++ N D R+ + + L EW Sbjct: 307 VFSQSLAALDLIEEFLANNASEVSKTWNLNKDYFRMDGSTKPEKRL--------EWGTAF 358 Query: 105 NEGKIP---LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGF 161 N+ K P + G G+NL+ G N ++ F + W+ +Q V R + G Sbjct: 359 NDPKNPRARFFLTSTKAGGIGINLK-GANRVIIFDVSWNPSVDEQ-----SVFRAYRLGQ 412 Query: 162 KRAVFVYYLIAQNTIDELVLQR 183 + +VY +AQ T++E++ R Sbjct: 413 HKPCYVYRFVAQGTMEEIMYYR 434 >gi|302845062|ref|XP_002954070.1| hypothetical protein VOLCADRAFT_40456 [Volvox carteri f. nagariensis] gi|300260569|gb|EFJ44787.1| hypothetical protein VOLCADRAFT_40456 [Volvox carteri f. nagariensis] Length = 520 Score = 38.9 bits (89), Expect = 0.41, Method: Compositional matrix adjust. Identities = 27/75 (36%), Positives = 38/75 (50%), Gaps = 6/75 (8%) Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 G GLNL G N LV F W+ QQ R+ QR + VFVY ++ +I+E Sbjct: 452 GCGLNL-IGANRLVLFDPDWNPANDQQAAARVWRDGQR-----KRVFVYRFLSTGSIEEK 505 Query: 180 VLQRLRTKSTIQDLL 194 V QR +K ++ L+ Sbjct: 506 VYQRQLSKEGLKQLV 520 >gi|201066350|ref|NP_001128432.1| RAD54 like [Rattus norvegicus] gi|197246624|gb|AAI69034.1| Rad54l protein [Rattus norvegicus] Length = 748 Score = 38.9 bits (89), Expect = 0.41, Method: Compositional matrix adjust. Identities = 23/77 (29%), Positives = 39/77 (50%), Gaps = 6/77 (7%) Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 G GLNL G N LV F W+ +Q + R+ + G K+ ++Y L++ TI+E Sbjct: 577 GCGLNL-IGANRLVMFDPDWNPANDEQAMARVW-----RDGQKKICYIYRLLSAGTIEEK 630 Query: 180 VLQRLRTKSTIQDLLLN 196 + QR K + +++ Sbjct: 631 IFQRQSHKKALSSCVVD 647 >gi|68467321|ref|XP_722322.1| hypothetical protein CaO19.12471 [Candida albicans SC5314] gi|68467550|ref|XP_722208.1| hypothetical protein CaO19.5004 [Candida albicans SC5314] gi|46444164|gb|EAL03441.1| hypothetical protein CaO19.5004 [Candida albicans SC5314] gi|46444289|gb|EAL03565.1| hypothetical protein CaO19.12471 [Candida albicans SC5314] Length = 848 Score = 38.9 bits (89), Expect = 0.41, Method: Compositional matrix adjust. Identities = 25/98 (25%), Positives = 46/98 (46%), Gaps = 8/98 (8%) Query: 101 IQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQ 158 + ++N+ P + + G G+NL G N LV W+ QQ + R+ + Sbjct: 665 VDKFNDPNGPEFIFLLSSKAGGCGINL-IGANRLVLMDPDWNPASDQQALARVW-----R 718 Query: 159 AGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 G K+ F+Y I+ TI+E + QR K ++ +++ Sbjct: 719 DGQKKDCFIYRFISTGTIEEKIFQRQSMKMSLSSCVVD 756 >gi|149239498|ref|XP_001525625.1| DNA repair and recombination protein RAD54 [Lodderomyces elongisporus NRRL YB-4239] gi|146451118|gb|EDK45374.1| DNA repair and recombination protein RAD54 [Lodderomyces elongisporus NRRL YB-4239] Length = 875 Score = 38.9 bits (89), Expect = 0.41, Method: Compositional matrix adjust. Identities = 23/77 (29%), Positives = 38/77 (49%), Gaps = 6/77 (7%) Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 G G+NL G N LV W+ QQ + R+ + G K+ F+Y I+ TI+E Sbjct: 713 GCGINL-IGANRLVLIDPDWNPASDQQALARVW-----RDGQKKDCFIYRFISTGTIEEK 766 Query: 180 VLQRLRTKSTIQDLLLN 196 + QR K ++ +++ Sbjct: 767 IFQRQSMKMSLSSCVVD 783 >gi|156052901|ref|XP_001592377.1| hypothetical protein SS1G_06618 [Sclerotinia sclerotiorum 1980] gi|154704396|gb|EDO04135.1| hypothetical protein SS1G_06618 [Sclerotinia sclerotiorum 1980 UF-70] Length = 1505 Score = 38.9 bits (89), Expect = 0.42, Method: Composition-based stats. Identities = 27/87 (31%), Positives = 44/87 (50%), Gaps = 11/87 (12%) Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 G G+NL +++F S W + Q M R + G K+ V +Y L+++ T++E Sbjct: 826 GLGINLMTADTVVIFDSDWNPQADLQAM------ARAHRIGQKKPVSIYRLVSKETVEEE 879 Query: 180 VLQRLRTK-----STIQDLLLNALKKE 201 +L+R R K TIQ + + KKE Sbjct: 880 ILERARNKLMLEFITIQRGVTDKEKKE 906 >gi|154687749|ref|YP_001422910.1| YwqA [Bacillus amyloliquefaciens FZB42] gi|154353600|gb|ABS75679.1| YwqA [Bacillus amyloliquefaciens FZB42] Length = 924 Score = 38.9 bits (89), Expect = 0.42, Method: Compositional matrix adjust. Identities = 26/97 (26%), Positives = 46/97 (47%), Gaps = 6/97 (6%) Query: 101 IQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 ++ + + + P L + G GLNL N ++ + WW+ +E R + G Sbjct: 809 VERFQKKEYPTLILSLKAGGTGLNLTA-ANHVIHYDRWWN-----PAVENQATDRAYRIG 862 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 +R V V+ LI TI+E + L TK T+ D ++ + Sbjct: 863 QERFVHVHKLITTGTIEEKIDAMLETKQTLNDQIIQS 899 >gi|330842982|ref|XP_003293445.1| hypothetical protein DICPUDRAFT_158303 [Dictyostelium purpureum] gi|325076230|gb|EGC30034.1| hypothetical protein DICPUDRAFT_158303 [Dictyostelium purpureum] Length = 1044 Score = 38.9 bits (89), Expect = 0.42, Method: Composition-based stats. Identities = 42/170 (24%), Positives = 72/170 (42%), Gaps = 22/170 (12%) Query: 29 TVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPII--VAYHFNSDLARLQK 86 + KC++L +E KE+H+ K K L + + I+ V F RL Sbjct: 868 SAKCIKL--------KEILQKEIHENKSKVL-IFSQMTKVLDILEDVLSIFGESFTRLDG 918 Query: 87 AFPQGRTLDKDPCTIQEWNEGK-IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQ 145 P D I + K IP+ + G G+NL N+++F+ L ++ + Sbjct: 919 QTPVNERQD----IIDHFTNSKDIPVFLLSTNAGGLGINLTCA-NVVIFYDLSFNPQ--- 970 Query: 146 QMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 ++R R + G +R V VY L+ +NT+D + K + D +L Sbjct: 971 --VDRQAEDRAHRLGQEREVIVYKLLTENTVDIDIFNSANEKKKLNDNIL 1018 >gi|126659998|ref|ZP_01731121.1| SWI/SNF family helicase [Cyanothece sp. CCY0110] gi|126618763|gb|EAZ89509.1| SWI/SNF family helicase [Cyanothece sp. CCY0110] Length = 854 Score = 38.9 bits (89), Expect = 0.43, Method: Compositional matrix adjust. Identities = 24/78 (30%), Positives = 39/78 (50%), Gaps = 6/78 (7%) Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 G GLNL + ++ WW+ +E R + G +R V VY L+A++TI+E Sbjct: 766 GTGLNLT-AADYVIHLDPWWN-----PAVEDQATDRAYRIGQQRPVTVYRLVAKDTIEEK 819 Query: 180 VLQRLRTKSTIQDLLLNA 197 ++Q K + D LL+ Sbjct: 820 IVQLHHRKRDLADSLLSG 837 >gi|1495708|emb|CAA66380.1| RAD54 [Mus musculus] Length = 747 Score = 38.9 bits (89), Expect = 0.43, Method: Compositional matrix adjust. Identities = 23/77 (29%), Positives = 39/77 (50%), Gaps = 6/77 (7%) Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 G GLNL G N LV F W+ +Q + R+ + G K+ ++Y L++ TI+E Sbjct: 577 GCGLNL-IGANRLVMFDPDWNPANDEQAMARVW-----RDGQKKICYIYRLLSAGTIEEK 630 Query: 180 VLQRLRTKSTIQDLLLN 196 + QR K + +++ Sbjct: 631 IFQRQSHKKALSSCVVD 647 >gi|26353994|dbj|BAC40627.1| unnamed protein product [Mus musculus] Length = 747 Score = 38.9 bits (89), Expect = 0.43, Method: Compositional matrix adjust. Identities = 23/77 (29%), Positives = 39/77 (50%), Gaps = 6/77 (7%) Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 G GLNL G N LV F W+ +Q + R+ + G K+ ++Y L++ TI+E Sbjct: 577 GCGLNL-IGANRLVMFDPDWNPANDEQAMARVW-----RDGQKKICYIYRLLSAGTIEEK 630 Query: 180 VLQRLRTKSTIQDLLLN 196 + QR K + +++ Sbjct: 631 IFQRQSHKKALSSCVVD 647 >gi|170720849|ref|YP_001748537.1| non-specific serine/threonine protein kinase [Pseudomonas putida W619] gi|169758852|gb|ACA72168.1| Non-specific serine/threonine protein kinase [Pseudomonas putida W619] Length = 1108 Score = 38.9 bits (89), Expect = 0.43, Method: Compositional matrix adjust. Identities = 27/107 (25%), Positives = 50/107 (46%), Gaps = 7/107 (6%) Query: 91 GRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 G T D+ +Q++ +G + + G GLNL + ++ F WW+ Q +R Sbjct: 983 GDTRDRR-TPVQQFQQGDSEVFLISLKAGGVGLNLTA-ADTVIHFDPWWNPASENQATDR 1040 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + G + VFV+ LI + T++E + Q + K+ + LL+ Sbjct: 1041 A-----YRIGQDKPVFVFKLITRGTVEEKIQQLQQEKAALAASLLDG 1082 >gi|91974494|ref|YP_567153.1| helicase-like protein [Rhodopseudomonas palustris BisB5] gi|91680950|gb|ABE37252.1| helicase-like protein [Rhodopseudomonas palustris BisB5] Length = 924 Score = 38.9 bits (89), Expect = 0.43, Method: Composition-based stats. Identities = 30/82 (36%), Positives = 41/82 (50%), Gaps = 2/82 (2%) Query: 106 EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 E I L+ A A+C GLNLQ G L+ L W+ +Q I RI QR+ Sbjct: 759 ERTIRLVVATDAAC-EGLNLQTLGT-LINVDLPWNPSRLEQRIGRIKRFGQRRERVDMLN 816 Query: 166 FVYYLIAQNTIDELVLQRLRTK 187 VY+ Q T+DE V Q+L ++ Sbjct: 817 LVYHGSQQLTVDEKVYQKLSSR 838 >gi|171906595|ref|NP_033041.3| DNA repair and recombination protein RAD54-like [Mus musculus] gi|171906597|ref|NP_001116430.1| DNA repair and recombination protein RAD54-like [Mus musculus] gi|171906599|ref|NP_001116431.1| DNA repair and recombination protein RAD54-like [Mus musculus] gi|51316197|sp|P70270|RAD54_MOUSE RecName: Full=DNA repair and recombination protein RAD54-like; AltName: Full=RAD54 homolog; Short=mHR54; Short=mRAD54 gi|123244614|emb|CAM20670.1| RAD54 like (S. cerevisiae) [Mus musculus] gi|123253898|emb|CAM22667.1| RAD54 like (S. cerevisiae) [Mus musculus] gi|148698674|gb|EDL30621.1| RAD54 like (S. cerevisiae) [Mus musculus] Length = 747 Score = 38.9 bits (89), Expect = 0.43, Method: Compositional matrix adjust. Identities = 23/77 (29%), Positives = 39/77 (50%), Gaps = 6/77 (7%) Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 G GLNL G N LV F W+ +Q + R+ + G K+ ++Y L++ TI+E Sbjct: 577 GCGLNL-IGANRLVMFDPDWNPANDEQAMARVW-----RDGQKKICYIYRLLSAGTIEEK 630 Query: 180 VLQRLRTKSTIQDLLLN 196 + QR K + +++ Sbjct: 631 IFQRQSHKKALSSCVVD 647 >gi|20987234|gb|AAH21643.1| RAD54 like (S. cerevisiae) [Mus musculus] Length = 747 Score = 38.9 bits (89), Expect = 0.44, Method: Compositional matrix adjust. Identities = 23/77 (29%), Positives = 39/77 (50%), Gaps = 6/77 (7%) Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 G GLNL G N LV F W+ +Q + R+ + G K+ ++Y L++ TI+E Sbjct: 577 GCGLNL-IGANRLVMFDPDWNPANDEQAMARVW-----RDGQKKICYIYRLLSAGTIEEK 630 Query: 180 VLQRLRTKSTIQDLLLN 196 + QR K + +++ Sbjct: 631 IFQRQSHKKALSSCVVD 647 >gi|170085783|ref|XP_001874115.1| RAD5-like protein [Laccaria bicolor S238N-H82] gi|164651667|gb|EDR15907.1| RAD5-like protein [Laccaria bicolor S238N-H82] Length = 1156 Score = 38.9 bits (89), Expect = 0.45, Method: Compositional matrix adjust. Identities = 22/71 (30%), Positives = 35/71 (49%), Gaps = 6/71 (8%) Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 G GLNL N + WW+ Q I+R+ + G ++ V+V + I NTI+ Sbjct: 1067 GVGLNLT-AANHVFMMDCWWNAATENQAIDRV-----HRIGQEKTVYVTHFIVANTIESR 1120 Query: 180 VLQRLRTKSTI 190 +LQ + K+ I Sbjct: 1121 ILQIQKRKTAI 1131 >gi|311069060|ref|YP_003973983.1| putative RNA polymerase-associated helicase protein [Bacillus atrophaeus 1942] gi|310869577|gb|ADP33052.1| putative RNA polymerase-associated helicase protein [Bacillus atrophaeus 1942] Length = 556 Score = 38.9 bits (89), Expect = 0.46, Method: Compositional matrix adjust. Identities = 27/81 (33%), Positives = 45/81 (55%), Gaps = 7/81 (8%) Query: 107 GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVF 166 GK+ +L A A G G+NLQ+ NI + + L W+ +Q I RI + G +R V Sbjct: 420 GKVQVLIATEAG-GEGINLQFCNNI-INYDLPWNPMRLEQRIGRI-----HRLGQERDVH 472 Query: 167 VYYLIAQNTIDELVLQRLRTK 187 +Y + ++T++E +L+ L K Sbjct: 473 IYNMATKHTVEEHILKLLYEK 493 >gi|194386250|dbj|BAG59689.1| unnamed protein product [Homo sapiens] Length = 567 Score = 38.9 bits (89), Expect = 0.46, Method: Compositional matrix adjust. Identities = 23/77 (29%), Positives = 39/77 (50%), Gaps = 6/77 (7%) Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 G GLNL G N LV F W+ +Q + R+ + G K+ ++Y L++ TI+E Sbjct: 397 GCGLNL-IGANRLVMFDPDWNPANDEQAMARVW-----RDGQKKTCYIYRLLSAGTIEEK 450 Query: 180 VLQRLRTKSTIQDLLLN 196 + QR K + +++ Sbjct: 451 IFQRQSHKKALSSCVVD 467 >gi|224071533|ref|XP_002303505.1| chromatin remodeling complex subunit [Populus trichocarpa] gi|222840937|gb|EEE78484.1| chromatin remodeling complex subunit [Populus trichocarpa] Length = 2327 Score = 38.9 bits (89), Expect = 0.47, Method: Composition-based stats. Identities = 25/97 (25%), Positives = 46/97 (47%), Gaps = 7/97 (7%) Query: 101 IQEWNEGKIPLLFA-HPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQA 159 I +N+ K +F SCG G+NL ++++ S D H + + R + Sbjct: 1122 IARFNQDKSRFVFLLSTRSCGLGINLASADTVIIYDS---DFNPHSDIQ---AMNRAHRI 1175 Query: 160 GFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 G + + VY L+ + +++E +LQ R K + L +N Sbjct: 1176 GQSKRLLVYRLVVRASVEERILQLARKKLVLDQLFVN 1212 >gi|307197496|gb|EFN78730.1| Transcription termination factor 2 [Harpegnathos saltator] Length = 935 Score = 38.9 bits (89), Expect = 0.47, Method: Compositional matrix adjust. Identities = 26/85 (30%), Positives = 41/85 (48%), Gaps = 8/85 (9%) Query: 98 PCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTR 155 P I +N+ +L + G GLNL G N L+ F + W+ + Q +RI Sbjct: 820 PAIIDSFNKSNSDPRILLLSLTAGGVGLNL-VGANHLLLFDIHWNPQLESQAQDRI---- 874 Query: 156 QRQAGFKRAVFVYYLIAQNTIDELV 180 + G K+ V++Y I NTI+E + Sbjct: 875 -YRFGQKKDVYIYKFICSNTIEERI 898 >gi|316969757|gb|EFV53807.1| domain protein, SNF2 family [Trichinella spiralis] Length = 527 Score = 38.9 bits (89), Expect = 0.47, Method: Compositional matrix adjust. Identities = 24/95 (25%), Positives = 47/95 (49%), Gaps = 12/95 (12%) Query: 101 IQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLW---WDLEEHQQMIERIGVTRQR 157 + + +G+ + + GLNL +++F S W DL+ + RIG T+ Sbjct: 391 VDRFTKGEASVFLISTRAGNLGLNLMAADTVILFDSDWNPQCDLQASDR-CHRIGQTK-- 447 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQD 192 V +Y L+A+ TIDE+++ R ++K +++ Sbjct: 448 ------PVLIYRLVAKGTIDEIMVDRAQSKRKLEN 476 >gi|119627334|gb|EAX06929.1| RAD54-like (S. cerevisiae), isoform CRA_a [Homo sapiens] Length = 567 Score = 38.9 bits (89), Expect = 0.47, Method: Compositional matrix adjust. Identities = 23/77 (29%), Positives = 39/77 (50%), Gaps = 6/77 (7%) Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 G GLNL G N LV F W+ +Q + R+ + G K+ ++Y L++ TI+E Sbjct: 397 GCGLNL-IGANRLVMFDPDWNPANDEQAMARVW-----RDGQKKTCYIYRLLSAGTIEEK 450 Query: 180 VLQRLRTKSTIQDLLLN 196 + QR K + +++ Sbjct: 451 IFQRQSHKKALSSCVVD 467 >gi|118401967|ref|XP_001033303.1| SNF2 family N-terminal domain containing protein [Tetrahymena thermophila] gi|89287651|gb|EAR85640.1| SNF2 family N-terminal domain containing protein [Tetrahymena thermophila SB210] Length = 1040 Score = 38.9 bits (89), Expect = 0.47, Method: Compositional matrix adjust. Identities = 34/145 (23%), Positives = 62/145 (42%), Gaps = 9/145 (6%) Query: 54 EKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLF 113 +K K+L + A ++ A D ++ ++ G+ D + N + P + Sbjct: 886 QKQKSLYHFENQTTNADLLQASTLKEDSSQQEQTM--GQEEQYDNSNQNQENTSQTPTVL 943 Query: 114 AHPASCGH-GLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIA 172 G+ GLNL G N L+ WW+ Q I RI + G ++ ++Y +I Sbjct: 944 LASLMSGYVGLNLT-GANNLILCDSWWNPAVEDQAINRI-----HRLGQQKQTYIYKMIC 997 Query: 173 QNTIDELVLQRLRTKSTIQDLLLNA 197 ++TI+E + Q K I + N+ Sbjct: 998 KDTIEEKIQQINDQKRDIFQTIFNS 1022 >gi|316969354|gb|EFV53467.1| DNA repair protein Rhp54 [Trichinella spiralis] Length = 328 Score = 38.9 bits (89), Expect = 0.48, Method: Compositional matrix adjust. Identities = 24/77 (31%), Positives = 38/77 (49%), Gaps = 6/77 (7%) Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 G GLNL G N LV F W+ Q + R+ + G K+ F+Y L+A +I+E Sbjct: 165 GCGLNL-IGANRLVMFDPDWNPANDGQAMARVW-----RDGQKKICFIYRLLATGSIEEK 218 Query: 180 VLQRLRTKSTIQDLLLN 196 + QR K + +++ Sbjct: 219 IFQRQTHKKALSSCVVD 235 >gi|209882890|ref|XP_002142880.1| SNF2 family helicase [Cryptosporidium muris RN66] gi|209558486|gb|EEA08531.1| SNF2 family helicase, putative [Cryptosporidium muris RN66] Length = 1313 Score = 38.9 bits (89), Expect = 0.48, Method: Composition-based stats. Identities = 26/80 (32%), Positives = 43/80 (53%), Gaps = 6/80 (7%) Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 G GLNLQ +++F S W HQ + + +R + G K V V+ L++ + ++EL Sbjct: 886 GLGLNLQAADTVIIFDSDW---NPHQDLQAQ---SRAHRMGQKNEVRVFRLVSISGVEEL 939 Query: 180 VLQRLRTKSTIQDLLLNALK 199 VL+R + K I ++ A K Sbjct: 940 VLKRAQKKLDIDQKIIQAGK 959 >gi|241765480|ref|ZP_04763446.1| Non-specific serine/threonine protein kinase [Acidovorax delafieldii 2AN] gi|241364765|gb|EER59758.1| Non-specific serine/threonine protein kinase [Acidovorax delafieldii 2AN] Length = 940 Score = 38.5 bits (88), Expect = 0.49, Method: Composition-based stats. Identities = 24/89 (26%), Positives = 41/89 (46%), Gaps = 6/89 (6%) Query: 102 QEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGF 161 Q +E P+L + G GLNL + +V WW+ +E R + G Sbjct: 797 QAQDETSAPILLVSLKAGGLGLNLT-AADTVVHLDPWWN-----PAVEEQATARAHRIGQ 850 Query: 162 KRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 + VFVY L+ + +I+E +L+ K+ + Sbjct: 851 DQPVFVYKLVVEGSIEERMLELQARKAAL 879 >gi|134108572|ref|XP_777237.1| hypothetical protein CNBB4670 [Cryptococcus neoformans var. neoformans B-3501A] gi|50259922|gb|EAL22590.1| hypothetical protein CNBB4670 [Cryptococcus neoformans var. neoformans B-3501A] Length = 1399 Score = 38.5 bits (88), Expect = 0.49, Method: Compositional matrix adjust. Identities = 39/149 (26%), Positives = 66/149 (44%), Gaps = 21/149 (14%) Query: 59 LEVIIEKANAAPIIVAYHFNS--DLARL---QKAFPQGRTL-----DKDPCTIQEWN--- 105 ++ IIE+ + IIV F DL + ++ P + + D+ TI+++N Sbjct: 1226 IDAIIEQDPSQKIIVFSQFVEYIDLCSIFLRRRNIPHAKYVGSMKQDEREDTIKDFNRPM 1285 Query: 106 -EGKIPLLFAHPASCGH-GLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKR 163 E K P CG GLNL +++ W E+Q V R + G R Sbjct: 1286 EEDKSPRCLLMSLKCGGVGLNLCIANHVICLDLAWNAATENQ------AVDRAHRIGQTR 1339 Query: 164 AVFVYYLIAQNTIDELVLQRLRTKSTIQD 192 V V+ L+ +NTID+ +++ + K + D Sbjct: 1340 EVVVHRLVVENTIDQRLMELQQQKQALSD 1368 >gi|297737012|emb|CBI26213.3| unnamed protein product [Vitis vinifera] Length = 1110 Score = 38.5 bits (88), Expect = 0.50, Method: Compositional matrix adjust. Identities = 24/80 (30%), Positives = 44/80 (55%), Gaps = 6/80 (7%) Query: 118 SCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 + G GLNLQ +++F S W + QM ++ R + G K+ V V+ L++ +I+ Sbjct: 788 AGGLGLNLQTADTVIIFDSDW-----NPQMDQQ-AEDRAHRIGQKKEVRVFVLVSVGSIE 841 Query: 178 ELVLQRLRTKSTIQDLLLNA 197 E++L+R + K I ++ A Sbjct: 842 EVILERAKQKMGIDAKVIQA 861 >gi|168019640|ref|XP_001762352.1| chromatin remodeling complex SWI/SNF protein [Physcomitrella patens subsp. patens] gi|162686430|gb|EDQ72819.1| chromatin remodeling complex SWI/SNF protein [Physcomitrella patens subsp. patens] Length = 1289 Score = 38.5 bits (88), Expect = 0.50, Method: Compositional matrix adjust. Identities = 27/99 (27%), Positives = 51/99 (51%), Gaps = 8/99 (8%) Query: 101 IQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQ 158 +Q++N P + + G GLNLQ +++F S W + QM ++ R + Sbjct: 916 LQKFNAPDSPYFMFLLSTRAGGLGLNLQTADTVILFDSDW-----NPQM-DQQAEDRAHR 969 Query: 159 AGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 G K+ V V+ L++ +I+E +L+R ++K I ++ A Sbjct: 970 IGQKKEVRVFVLVSVGSIEEEILERAKSKMGIDAKVIQA 1008 >gi|149177854|ref|ZP_01856453.1| Snf2 family protein [Planctomyces maris DSM 8797] gi|148843344|gb|EDL57708.1| Snf2 family protein [Planctomyces maris DSM 8797] Length = 1110 Score = 38.5 bits (88), Expect = 0.50, Method: Compositional matrix adjust. Identities = 36/149 (24%), Positives = 64/149 (42%), Gaps = 17/149 (11%) Query: 56 IKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQ---------GRTLDKDPCTIQEWNE 106 I LE +IE+ + A +V F S L+ +Q+ Q G+T D+ + + Sbjct: 950 IPHLEELIEEGHKA--LVFSQFTSMLSIVQEHLDQKNIVYEYLDGQTRDRKERVDRFQTD 1007 Query: 107 GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVF 166 + + G GLNL + + WW+ +E + R + G + VF Sbjct: 1008 KDCGVFLISLKAGGLGLNLTAADYVFIL-DPWWN-----PAVETQAIDRAHRVGQTKRVF 1061 Query: 167 VYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 Y LI +NT++E + + + K + D +L Sbjct: 1062 AYKLICRNTVEEKITELQQQKRELADAIL 1090 >gi|320528040|ref|ZP_08029206.1| protein, SNF2 family [Solobacterium moorei F0204] gi|320131666|gb|EFW24230.1| protein, SNF2 family [Solobacterium moorei F0204] Length = 706 Score = 38.5 bits (88), Expect = 0.50, Method: Compositional matrix adjust. Identities = 37/119 (31%), Positives = 58/119 (48%), Gaps = 10/119 (8%) Query: 77 FNSDLARLQKAFP--QGR-TLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILV 133 F SDL L KA P G+ +L+K + +++E +L + G GLN+Q I++ Sbjct: 562 FVSDLL-LGKALPVISGKLSLEKRQDILHQFDEPIARVLPIQIHAGGIGLNIQ-TAEIVI 619 Query: 134 FFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQD 192 + Q I R+ + G VFVY L++ +TIDE +++RL K I D Sbjct: 620 LCEPQLKPSDEMQAISRV-----YRMGQVNHVFVYRLLSADTIDETLVKRLHEKQNIFD 673 >gi|119498441|ref|XP_001265978.1| SNF2 family helicase, putative [Neosartorya fischeri NRRL 181] gi|119414142|gb|EAW24081.1| SNF2 family helicase, putative [Neosartorya fischeri NRRL 181] Length = 928 Score = 38.5 bits (88), Expect = 0.50, Method: Compositional matrix adjust. Identities = 28/110 (25%), Positives = 53/110 (48%), Gaps = 9/110 (8%) Query: 92 RTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERI 151 ++ +D T + + + +L A + C GLNL N + WW Q ++R+ Sbjct: 809 KSTARDASTYKFSKDPQCKVLLASLSVCSVGLNL-VAANQAILADSWWAPAIEDQAVDRV 867 Query: 152 GVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 + G KR V+ L+ +NTI++ VL+ + T + L+L A +++ Sbjct: 868 -----YRLGQKRETTVWRLVMENTIEDRVLE---IQDTKRKLMLAAFREK 909 >gi|126660775|ref|ZP_01731871.1| SWI/SNF family helicase [Cyanothece sp. CCY0110] gi|126617919|gb|EAZ88692.1| SWI/SNF family helicase [Cyanothece sp. CCY0110] Length = 1400 Score = 38.5 bits (88), Expect = 0.51, Method: Compositional matrix adjust. Identities = 24/78 (30%), Positives = 39/78 (50%), Gaps = 6/78 (7%) Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 G GLNL + ++ WW+ +E R + G +R V VY L+A++TI+E Sbjct: 1312 GTGLNLT-AADYVIHLDPWWN-----PAVEDQATDRAYRIGQQRPVTVYRLVAKDTIEEK 1365 Query: 180 VLQRLRTKSTIQDLLLNA 197 ++Q K + D LL+ Sbjct: 1366 IVQLHHRKRDLADSLLSG 1383 >gi|172057599|ref|YP_001814059.1| non-specific serine/threonine protein kinase [Exiguobacterium sibiricum 255-15] gi|171990120|gb|ACB61042.1| Non-specific serine/threonine protein kinase [Exiguobacterium sibiricum 255-15] Length = 876 Score = 38.5 bits (88), Expect = 0.51, Method: Compositional matrix adjust. Identities = 40/163 (24%), Positives = 75/163 (46%), Gaps = 18/163 (11%) Query: 55 KIKALEVIIEKANAAP--IIVAYHFNSDLARLQKAFP---------QGRTLDKDPCTIQE 103 K++ L +IE+ AA I++ + LAR+++ G T +D + E Sbjct: 702 KLERLLTLIEEKLAAGHRILIFSQYTKMLARIRERLAAQQRAHFLLTGETPVEDRVALCE 761 Query: 104 -WNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFK 162 +N G++ L + G GLNL ++++ S WW+ QQ + R + G + Sbjct: 762 RFNAGEVDLFLISLKAGGTGLNLATADTVILYDS-WWNPAVEQQAAD-----RAHRLGQQ 815 Query: 163 RAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIHV 205 V V L+ TI+E + + K+T+ D +L+ K + + + Sbjct: 816 SPVEVIKLLMTGTIEEKMAELQDRKATMIDAVLSDQKPDILTI 858 >gi|237739928|ref|ZP_04570409.1| SWF/SNF family helicase [Fusobacterium sp. 2_1_31] gi|229421945|gb|EEO36992.1| SWF/SNF family helicase [Fusobacterium sp. 2_1_31] Length = 896 Score = 38.5 bits (88), Expect = 0.51, Method: Composition-based stats. Identities = 26/106 (24%), Positives = 50/106 (47%), Gaps = 6/106 (5%) Query: 91 GRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 G+T D+ + ++ + + + G GLNL I ++ WW+ + +E Sbjct: 777 GQTKDRQSLVDKFQSDNRYKVFVMTLKTGGVGLNLVSADTIFIY-DPWWN-----KTVEN 830 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + R + G + VF Y +I +NTI+E +L+ K + D L++ Sbjct: 831 QAIDRAYRLGQDKTVFAYKMIMRNTIEEKILKLQEIKDKLLDDLIS 876 >gi|237833999|ref|XP_002366297.1| SNF2/RAD54 helicase family protein [Toxoplasma gondii ME49] gi|211963961|gb|EEA99156.1| SNF2/RAD54 helicase family protein [Toxoplasma gondii ME49] Length = 1667 Score = 38.5 bits (88), Expect = 0.51, Method: Composition-based stats. Identities = 26/88 (29%), Positives = 38/88 (43%), Gaps = 5/88 (5%) Query: 105 NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA 164 N+ + +L + G GLNLQ I + WW+ Q I+R QR + Sbjct: 1561 NDPSLKVLLISLKAGGEGLNLQIASRIFL-MDPWWNPAAEMQAIQRAHRIGQRH----KE 1615 Query: 165 VFVYYLIAQNTIDELVLQRLRTKSTIQD 192 V IA+ TI+E +LQ K + D Sbjct: 1616 VIAIRFIAEKTIEERILQLQEKKQLVFD 1643 >gi|66811390|ref|XP_639875.1| SNF2-related domain-containing protein [Dictyostelium discoideum AX4] gi|60466825|gb|EAL64871.1| SNF2-related domain-containing protein [Dictyostelium discoideum AX4] Length = 989 Score = 38.5 bits (88), Expect = 0.51, Method: Composition-based stats. Identities = 26/77 (33%), Positives = 41/77 (53%), Gaps = 6/77 (7%) Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 G G+NL GGN LV + W+ Q +ERI + G + VF+Y L + TI+E Sbjct: 720 GVGINL-IGGNHLVLYDPDWNPAIDIQAMERIW-----REGQTKPVFIYRLFSTGTIEEK 773 Query: 180 VLQRLRTKSTIQDLLLN 196 + QR K +I + +++ Sbjct: 774 IYQRQLMKESISNSIVD 790 >gi|310822580|ref|YP_003954938.1| snf2/helicase domain-containing protein [Stigmatella aurantiaca DW4/3-1] gi|309395652|gb|ADO73111.1| SNF2/helicase domain protein [Stigmatella aurantiaca DW4/3-1] Length = 1282 Score = 38.5 bits (88), Expect = 0.52, Method: Composition-based stats. Identities = 25/81 (30%), Positives = 38/81 (46%), Gaps = 6/81 (7%) Query: 101 IQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 IQ + EGK + + G G+NL + ++ WW+ +E R + G Sbjct: 1154 IQAFQEGKGDVFLISLKAGGTGINLT-AADYVIHLDPWWN-----PAVEDQATDRAHRIG 1207 Query: 161 FKRAVFVYYLIAQNTIDELVL 181 R V VY LIA+ TI+E +L Sbjct: 1208 QTRPVTVYRLIARGTIEEQIL 1228 >gi|331244727|ref|XP_003335003.1| SNF2 family ATP-dependent chromatin-remodeling factor snf21 [Puccinia graminis f. sp. tritici CRL 75-36-700-3] gi|309313993|gb|EFP90584.1| SNF2 family ATP-dependent chromatin-remodeling factor snf21 [Puccinia graminis f. sp. tritici CRL 75-36-700-3] Length = 964 Score = 38.5 bits (88), Expect = 0.52, Method: Composition-based stats. Identities = 48/206 (23%), Positives = 81/206 (39%), Gaps = 29/206 (14%) Query: 3 QYHKFQRELYCDLQGENIEAFNSAS-KTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEV 61 QY +R Q E FNS KT++ + +N ++ D KE+ KI Sbjct: 697 QYKSLRR-----FQLSRDEFFNSGKVKTLQLILASNNNLHADPSSSSKEIDKSKI----- 746 Query: 62 IIEKANAAPIIVAYHFNSDLARLQKAFP-----------QGRTLDKDPCTIQEWNEGKIP 110 +++ + + ++ F L L+ Q ++ Q N+ I Sbjct: 747 -VKQDSPSRFLIFSQFTQMLDILKVVLKLLDVKFLVLTGQTNVTERQSLVDQFTNDPSIT 805 Query: 111 LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYL 170 + + G GLNL +++F D H +R R + G R V V+ L Sbjct: 806 VFLLSTRAGGLGLNLMAADTVILFDQ---DFNPHN---DRQAEDRAYRLGQTRDVKVFKL 859 Query: 171 IAQNTIDELVLQRLRTKSTIQDLLLN 196 I++ TI+E +LQ TK I + + N Sbjct: 860 ISKGTIEEDILQLASTKIEIDNSISN 885 >gi|294782979|ref|ZP_06748305.1| Snf2 family protein [Fusobacterium sp. 1_1_41FAA] gi|294481620|gb|EFG29395.1| Snf2 family protein [Fusobacterium sp. 1_1_41FAA] Length = 896 Score = 38.5 bits (88), Expect = 0.52, Method: Composition-based stats. Identities = 26/106 (24%), Positives = 50/106 (47%), Gaps = 6/106 (5%) Query: 91 GRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 G+T D+ + ++ + + + G GLNL I ++ WW+ + +E Sbjct: 777 GQTKDRQSLVDKFQSDNRYKVFVMTLKTGGVGLNLVSADTIFIY-DPWWN-----KTVEN 830 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + R + G + VF Y +I +NTI+E +L+ K + D L++ Sbjct: 831 QAIDRAYRLGQDKTVFAYKMIMRNTIEEKILKLQEIKDKLLDDLIS 876 >gi|221486521|gb|EEE24782.1| DNA repair helicase rad5,16, putative [Toxoplasma gondii GT1] Length = 1667 Score = 38.5 bits (88), Expect = 0.52, Method: Composition-based stats. Identities = 26/88 (29%), Positives = 38/88 (43%), Gaps = 5/88 (5%) Query: 105 NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA 164 N+ + +L + G GLNLQ I + WW+ Q I+R QR + Sbjct: 1561 NDPSLKVLLISLKAGGEGLNLQIASRIFL-MDPWWNPAAEMQAIQRAHRIGQRH----KE 1615 Query: 165 VFVYYLIAQNTIDELVLQRLRTKSTIQD 192 V IA+ TI+E +LQ K + D Sbjct: 1616 VIAIRFIAEKTIEERILQLQEKKQLVFD 1643 >gi|193203249|ref|NP_001032980.2| hypothetical protein T23H2.3 [Caenorhabditis elegans] gi|163644490|gb|AAM15608.2|U80033_3 Hypothetical protein T23H2.3 [Caenorhabditis elegans] Length = 1001 Score = 38.5 bits (88), Expect = 0.52, Method: Composition-based stats. Identities = 24/62 (38%), Positives = 35/62 (56%), Gaps = 6/62 (9%) Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 G GLNL GGN L+ L W+ QQ +RI + G K+ VF++ LI + TI++ Sbjct: 903 GVGLNL-IGGNHLIMVDLHWNPALEQQACDRI-----YRMGQKKEVFIHRLIVKGTIEQR 956 Query: 180 VL 181 V+ Sbjct: 957 VM 958 >gi|313895499|ref|ZP_07829055.1| conserved domain protein [Selenomonas sp. oral taxon 137 str. F0430] gi|312975625|gb|EFR41084.1| conserved domain protein [Selenomonas sp. oral taxon 137 str. F0430] Length = 91 Score = 38.5 bits (88), Expect = 0.53, Method: Compositional matrix adjust. Identities = 25/90 (27%), Positives = 42/90 (46%), Gaps = 6/90 (6%) Query: 111 LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYL 170 + A+ G G+ L +VFFS+ + + +Q RI Q K Y+ Sbjct: 1 MFVGQIAAAGLGITL-IAAATMVFFSMDYSMSNFEQAKARIHRVSQ-----KENCHYIYI 54 Query: 171 IAQNTIDELVLQRLRTKSTIQDLLLNALKK 200 +A T+D VL+ LR K+ + LL++ +K Sbjct: 55 VAAGTVDRKVLKALRDKADLAKLLVDDYRK 84 >gi|126660084|ref|ZP_01731204.1| SWI/SNF family helicase [Cyanothece sp. CCY0110] gi|126618604|gb|EAZ89353.1| SWI/SNF family helicase [Cyanothece sp. CCY0110] Length = 1400 Score = 38.5 bits (88), Expect = 0.53, Method: Compositional matrix adjust. Identities = 24/78 (30%), Positives = 39/78 (50%), Gaps = 6/78 (7%) Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 G GLNL + ++ WW+ +E R + G +R V VY L+A++TI+E Sbjct: 1312 GTGLNLT-AADYVIHLDPWWN-----PAVEDQATDRAYRIGQQRPVTVYRLVAKDTIEEK 1365 Query: 180 VLQRLRTKSTIQDLLLNA 197 ++Q K + D LL+ Sbjct: 1366 IVQLHHRKRDLADSLLSG 1383 >gi|268579039|ref|XP_002644502.1| Hypothetical protein CBG14390 [Caenorhabditis briggsae] gi|187027870|emb|CAP32941.1| hypothetical protein CBG_14390 [Caenorhabditis briggsae AF16] Length = 2938 Score = 38.5 bits (88), Expect = 0.53, Method: Composition-based stats. Identities = 26/80 (32%), Positives = 40/80 (50%), Gaps = 6/80 (7%) Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 G GLNLQ +++F S W HQ M + R + G K V V+ LI N+++E Sbjct: 2028 GLGLNLQTADTVIIFDSDW---NPHQDMQAQ---DRAHRIGQKAEVRVFRLITANSVEEK 2081 Query: 180 VLQRLRTKSTIQDLLLNALK 199 +L R K + + ++ A K Sbjct: 2082 ILASARFKLNVDEKVIQAGK 2101 >gi|328705070|ref|XP_001948023.2| PREDICTED: DNA repair and recombination protein RAD54-like [Acyrthosiphon pisum] Length = 751 Score = 38.5 bits (88), Expect = 0.54, Method: Compositional matrix adjust. Identities = 23/64 (35%), Positives = 33/64 (51%), Gaps = 6/64 (9%) Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 G GLNL G N LV F W+ Q + R+ + G K+ FVY +A +I+E Sbjct: 565 GCGLNL-IGANRLVMFDPDWNPANDDQAMARVW-----RDGQKKPCFVYRFLATGSIEEK 618 Query: 180 VLQR 183 ++QR Sbjct: 619 MMQR 622 >gi|317473515|ref|ZP_07932807.1| SNF2 family domain-containing protein [Anaerostipes sp. 3_2_56FAA] gi|316899026|gb|EFV21048.1| SNF2 family domain-containing protein [Anaerostipes sp. 3_2_56FAA] Length = 1116 Score = 38.5 bits (88), Expect = 0.54, Method: Compositional matrix adjust. Identities = 23/97 (23%), Positives = 44/97 (45%), Gaps = 6/97 (6%) Query: 101 IQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 ++++N + + G GLNL +I++ + WW+L Q R + G Sbjct: 1008 VEDFNNDDTSVFCISLKAGGTGLNLT-SADIVIHYDPWWNLAVQNQ-----ATDRAHRIG 1061 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + V VY LI + TI++ +++ K + D +L Sbjct: 1062 QENVVMVYRLIVEGTIEDNIVKLQEKKKELADQILGG 1098 >gi|303248715|ref|ZP_07334968.1| SNF2-related protein [Desulfovibrio fructosovorans JJ] gi|302489880|gb|EFL49808.1| SNF2-related protein [Desulfovibrio fructosovorans JJ] Length = 1072 Score = 38.5 bits (88), Expect = 0.54, Method: Compositional matrix adjust. Identities = 21/76 (27%), Positives = 38/76 (50%), Gaps = 6/76 (7%) Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 G GLNL + ++ + WW+ +E R + G +R VF Y +I QNT++E Sbjct: 983 GTGLNLT-SADYVIHYDPWWN-----PAVENQATDRTHRIGQQRQVFSYKMICQNTVEEK 1036 Query: 180 VLQRLRTKSTIQDLLL 195 +L+ K + + ++ Sbjct: 1037 ILKLQEQKKDVAEAII 1052 >gi|299754940|ref|XP_001828301.2| hypothetical protein CC1G_02882 [Coprinopsis cinerea okayama7#130] gi|298410995|gb|EAU93652.2| hypothetical protein CC1G_02882 [Coprinopsis cinerea okayama7#130] Length = 836 Score = 38.5 bits (88), Expect = 0.54, Method: Composition-based stats. Identities = 25/87 (28%), Positives = 41/87 (47%), Gaps = 6/87 (6%) Query: 118 SCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 S G GLN+ N+ V WW+ +E ++R + G ++ V VY + A NT++ Sbjct: 741 SGGTGLNITSCNNV-VILDPWWN-----PYVEEQAISRAHRLGQEKEVNVYRITAPNTVE 794 Query: 178 ELVLQRLRTKSTIQDLLLNALKKETIH 204 + + + K I D L + TIH Sbjct: 795 DKICKTQHRKFNIIDPLQDRCAATTIH 821 >gi|225432582|ref|XP_002281240.1| PREDICTED: hypothetical protein [Vitis vinifera] Length = 1103 Score = 38.5 bits (88), Expect = 0.54, Method: Compositional matrix adjust. Identities = 24/80 (30%), Positives = 44/80 (55%), Gaps = 6/80 (7%) Query: 118 SCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 + G GLNLQ +++F S W + QM ++ R + G K+ V V+ L++ +I+ Sbjct: 788 AGGLGLNLQTADTVIIFDSDW-----NPQM-DQQAEDRAHRIGQKKEVRVFVLVSVGSIE 841 Query: 178 ELVLQRLRTKSTIQDLLLNA 197 E++L+R + K I ++ A Sbjct: 842 EVILERAKQKMGIDAKVIQA 861 >gi|182626118|ref|ZP_02953879.1| helicase, SNF2/RAD54 family [Clostridium perfringens D str. JGS1721] gi|177908639|gb|EDT71160.1| helicase, SNF2/RAD54 family [Clostridium perfringens D str. JGS1721] Length = 1084 Score = 38.5 bits (88), Expect = 0.54, Method: Composition-based stats. Identities = 26/81 (32%), Positives = 40/81 (49%), Gaps = 6/81 (7%) Query: 101 IQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 + E+NEG+ + + G GLNL +I++ F WW+ +E R + G Sbjct: 967 VNEFNEGENSVFLISLKAGGIGLNLT-SADIVIHFDPWWN-----PAVENQATDRAHRMG 1020 Query: 161 FKRAVFVYYLIAQNTIDELVL 181 K V V LIA+ TI+E V+ Sbjct: 1021 QKNVVEVIKLIAKGTIEEKVV 1041 >gi|167747531|ref|ZP_02419658.1| hypothetical protein ANACAC_02252 [Anaerostipes caccae DSM 14662] gi|167652893|gb|EDR97022.1| hypothetical protein ANACAC_02252 [Anaerostipes caccae DSM 14662] Length = 1117 Score = 38.5 bits (88), Expect = 0.55, Method: Compositional matrix adjust. Identities = 23/97 (23%), Positives = 44/97 (45%), Gaps = 6/97 (6%) Query: 101 IQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 ++++N + + G GLNL +I++ + WW+L Q R + G Sbjct: 1009 VEDFNNDDTSVFCISLKAGGTGLNLT-SADIVIHYDPWWNLAVQNQ-----ATDRAHRIG 1062 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + V VY LI + TI++ +++ K + D +L Sbjct: 1063 QENVVMVYRLIVEGTIEDNIVKLQEKKKELADQILGG 1099 >gi|317482426|ref|ZP_07941443.1| SNF2 family domain-containing protein [Bifidobacterium sp. 12_1_47BFAA] gi|316916086|gb|EFV37491.1| SNF2 family domain-containing protein [Bifidobacterium sp. 12_1_47BFAA] Length = 1394 Score = 38.5 bits (88), Expect = 0.56, Method: Composition-based stats. Identities = 23/90 (25%), Positives = 42/90 (46%), Gaps = 6/90 (6%) Query: 101 IQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 + ++N P + GLNL G ++++ WW+ Q +R + G Sbjct: 1270 VDQFNADDTPAFLISLKAGNTGLNLT-GASVVIHADPWWNAAAQDQATDR-----AHRIG 1323 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 V VY ++A++TI+E +L+ TKS + Sbjct: 1324 QTEDVNVYQVVAKDTIEERILELQHTKSEL 1353 >gi|312134029|ref|YP_004001368.1| superfamily ii DNA/RNA helicase [Bifidobacterium longum subsp. longum BBMN68] gi|311773336|gb|ADQ02824.1| Superfamily II DNA/RNA helicase [Bifidobacterium longum subsp. longum BBMN68] Length = 1286 Score = 38.5 bits (88), Expect = 0.56, Method: Composition-based stats. Identities = 23/90 (25%), Positives = 42/90 (46%), Gaps = 6/90 (6%) Query: 101 IQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 + ++N P + GLNL G ++++ WW+ Q +R + G Sbjct: 1162 VDQFNADDTPAFLISLKAGNTGLNLT-GASVVIHADPWWNAAAQDQATDR-----AHRIG 1215 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 V VY ++A++TI+E +L+ TKS + Sbjct: 1216 QTEDVNVYQVVAKDTIEERILELQHTKSEL 1245 >gi|296454690|ref|YP_003661833.1| SNF2-like protein [Bifidobacterium longum subsp. longum JDM301] gi|296184121|gb|ADH01003.1| SNF2-related protein [Bifidobacterium longum subsp. longum JDM301] Length = 1420 Score = 38.5 bits (88), Expect = 0.56, Method: Composition-based stats. Identities = 23/90 (25%), Positives = 42/90 (46%), Gaps = 6/90 (6%) Query: 101 IQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 + ++N P + GLNL G ++++ WW+ Q +R + G Sbjct: 1296 VDQFNADDTPAFLISLKAGNTGLNLT-GASVVIHADPWWNAAAQDQATDR-----AHRIG 1349 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 V VY ++A++TI+E +L+ TKS + Sbjct: 1350 QTEDVNVYQVVAKDTIEERILELQHTKSEL 1379 >gi|239621668|ref|ZP_04664699.1| conserved hypothetical protein [Bifidobacterium longum subsp. infantis CCUG 52486] gi|239515543|gb|EEQ55410.1| conserved hypothetical protein [Bifidobacterium longum subsp. infantis CCUG 52486] Length = 1388 Score = 38.5 bits (88), Expect = 0.56, Method: Composition-based stats. Identities = 23/90 (25%), Positives = 42/90 (46%), Gaps = 6/90 (6%) Query: 101 IQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 + ++N P + GLNL G ++++ WW+ Q +R + G Sbjct: 1264 VDQFNADDTPAFLISLKAGNTGLNLT-GASVVIHADPWWNAAAQDQATDR-----AHRIG 1317 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 V VY ++A++TI+E +L+ TKS + Sbjct: 1318 QTEDVNVYQVVAKDTIEERILELQHTKSEL 1347 >gi|227546637|ref|ZP_03976686.1| helicase [Bifidobacterium longum subsp. infantis ATCC 55813] gi|227212954|gb|EEI80833.1| helicase [Bifidobacterium longum subsp. infantis ATCC 55813] Length = 1394 Score = 38.5 bits (88), Expect = 0.56, Method: Composition-based stats. Identities = 23/90 (25%), Positives = 42/90 (46%), Gaps = 6/90 (6%) Query: 101 IQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 + ++N P + GLNL G ++++ WW+ Q +R + G Sbjct: 1270 VDQFNADDTPAFLISLKAGNTGLNLT-GASVVIHADPWWNAAAQDQATDR-----AHRIG 1323 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 V VY ++A++TI+E +L+ TKS + Sbjct: 1324 QTEDVNVYQVVAKDTIEERILELQHTKSEL 1353 >gi|213691499|ref|YP_002322085.1| SNF2-related protein [Bifidobacterium longum subsp. infantis ATCC 15697] gi|213522960|gb|ACJ51707.1| SNF2-related protein [Bifidobacterium longum subsp. infantis ATCC 15697] gi|320457574|dbj|BAJ68195.1| putative helicase [Bifidobacterium longum subsp. infantis ATCC 15697] Length = 1423 Score = 38.5 bits (88), Expect = 0.56, Method: Composition-based stats. Identities = 23/90 (25%), Positives = 42/90 (46%), Gaps = 6/90 (6%) Query: 101 IQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 + ++N P + GLNL G ++++ WW+ Q +R + G Sbjct: 1299 VDQFNADDTPAFLISLKAGNTGLNLT-GASVVIHADPWWNAAAQDQATDR-----AHRIG 1352 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 V VY ++A++TI+E +L+ TKS + Sbjct: 1353 QTEDVNVYQVVAKDTIEERILELQHTKSEL 1382 >gi|189440776|ref|YP_001955857.1| superfamily II DNA/RNA helicase [Bifidobacterium longum DJO10A] gi|189429211|gb|ACD99359.1| Superfamily II DNA/RNA helicase [Bifidobacterium longum DJO10A] Length = 1394 Score = 38.5 bits (88), Expect = 0.56, Method: Composition-based stats. Identities = 23/90 (25%), Positives = 42/90 (46%), Gaps = 6/90 (6%) Query: 101 IQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 + ++N P + GLNL G ++++ WW+ Q +R + G Sbjct: 1270 VDQFNADDTPAFLISLKAGNTGLNLT-GASVVIHADPWWNAAAQDQATDR-----AHRIG 1323 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 V VY ++A++TI+E +L+ TKS + Sbjct: 1324 QTEDVNVYQVVAKDTIEERILELQHTKSEL 1353 >gi|23466281|ref|NP_696884.1| helicase [Bifidobacterium longum NCC2705] gi|322689764|ref|YP_004209498.1| helicase [Bifidobacterium longum subsp. infantis 157F] gi|322691713|ref|YP_004221283.1| helicase [Bifidobacterium longum subsp. longum JCM 1217] gi|23327031|gb|AAN25520.1| possible helicase [Bifidobacterium longum NCC2705] gi|320456569|dbj|BAJ67191.1| putative helicase [Bifidobacterium longum subsp. longum JCM 1217] gi|320461100|dbj|BAJ71720.1| putative helicase [Bifidobacterium longum subsp. infantis 157F] Length = 1394 Score = 38.5 bits (88), Expect = 0.56, Method: Composition-based stats. Identities = 23/90 (25%), Positives = 42/90 (46%), Gaps = 6/90 (6%) Query: 101 IQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 + ++N P + GLNL G ++++ WW+ Q +R + G Sbjct: 1270 VDQFNADDTPAFLISLKAGNTGLNLT-GASVVIHADPWWNAAAQDQATDR-----AHRIG 1323 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 V VY ++A++TI+E +L+ TKS + Sbjct: 1324 QTEDVNVYQVVAKDTIEERILELQHTKSEL 1353 >gi|332024911|gb|EGI65099.1| DNA repair and recombination protein RAD54-like protein [Acromyrmex echinatior] Length = 681 Score = 38.5 bits (88), Expect = 0.56, Method: Compositional matrix adjust. Identities = 24/77 (31%), Positives = 37/77 (48%), Gaps = 6/77 (7%) Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 G GLNL G N LV F W+ Q + R+ + G K+ FVY ++ TI+E Sbjct: 517 GCGLNL-IGANRLVMFDPDWNPANDDQAMARVW-----RDGQKKPCFVYRFLSTGTIEEK 570 Query: 180 VLQRLRTKSTIQDLLLN 196 + QR K + +++ Sbjct: 571 IFQRQAHKKALSSTVVD 587 >gi|308067420|ref|YP_003869025.1| Superfamily II DNA/RNA helicase, SNF2 family [Paenibacillus polymyxa E681] gi|305856699|gb|ADM68487.1| Superfamily II DNA/RNA helicase, SNF2 family [Paenibacillus polymyxa E681] Length = 1121 Score = 38.5 bits (88), Expect = 0.56, Method: Compositional matrix adjust. Identities = 22/75 (29%), Positives = 36/75 (48%), Gaps = 6/75 (8%) Query: 104 WNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKR 163 +NEG+ L + G GLNL + + + LWW+ +E R + G K+ Sbjct: 1015 FNEGERELFLISLKAGGTGLNLTGADTV-ILYDLWWN-----PAVEEQATNRAHRMGQKK 1068 Query: 164 AVFVYYLIAQNTIDE 178 V V L+AQ T+++ Sbjct: 1069 VVQVIRLVAQGTVED 1083 >gi|165971312|gb|AAI58841.1| Rad54l protein [Rattus norvegicus] Length = 470 Score = 38.5 bits (88), Expect = 0.56, Method: Compositional matrix adjust. Identities = 25/98 (25%), Positives = 46/98 (46%), Gaps = 8/98 (8%) Query: 101 IQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQ 158 ++ +N P + + G GLNL G N LV F W+ +Q + R+ + Sbjct: 278 VERFNSPSSPDFVFMLSSKAGGCGLNL-IGANRLVMFDPDWNPANDEQAMARVW-----R 331 Query: 159 AGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 G K+ ++Y L++ TI+E + QR K + +++ Sbjct: 332 DGQKKICYIYRLLSAGTIEEKIFQRQSHKKALSSCVVD 369 >gi|320169825|gb|EFW46724.1| DNA repair protein RAD54 [Capsaspora owczarzaki ATCC 30864] Length = 941 Score = 38.5 bits (88), Expect = 0.57, Method: Compositional matrix adjust. Identities = 25/85 (29%), Positives = 40/85 (47%), Gaps = 8/85 (9%) Query: 101 IQEWN--EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQ 158 + E+N + L + G G+NL GGN LV F W+ Q + R+ + Sbjct: 669 VDEFNNPSSNVFLFLLSSKAGGCGINL-IGGNRLVLFDPDWNPASDGQAMARVW-----R 722 Query: 159 AGFKRAVFVYYLIAQNTIDELVLQR 183 G K+ V++Y + TI+E + QR Sbjct: 723 DGQKKKVYLYRFLGTGTIEEKIFQR 747 >gi|159898290|ref|YP_001544537.1| non-specific serine/threonine protein kinase [Herpetosiphon aurantiacus ATCC 23779] gi|159891329|gb|ABX04409.1| Non-specific serine/threonine protein kinase [Herpetosiphon aurantiacus ATCC 23779] Length = 1055 Score = 38.5 bits (88), Expect = 0.57, Method: Compositional matrix adjust. Identities = 26/103 (25%), Positives = 47/103 (45%), Gaps = 6/103 (5%) Query: 80 DLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWW 139 D L A+ G+T ++ + + +I + G GLNL + ++ WW Sbjct: 926 DRRNLSYAYLDGKTNNRAAVVDRFQTDPQIHFFLISLKAGGVGLNLT-AADYVIHIDPWW 984 Query: 140 DLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQ 182 + QQ +R + G + VF+Y LI +N+++E +LQ Sbjct: 985 NPAVEQQATDRT-----HRIGQDKPVFIYKLIVRNSVEEKILQ 1022 >gi|255552319|ref|XP_002517204.1| ATP binding protein, putative [Ricinus communis] gi|223543839|gb|EEF45367.1| ATP binding protein, putative [Ricinus communis] Length = 1079 Score = 38.5 bits (88), Expect = 0.57, Method: Compositional matrix adjust. Identities = 22/80 (27%), Positives = 42/80 (52%), Gaps = 6/80 (7%) Query: 118 SCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 + G GLNLQ +++F S W +++ R + G K+ V V+ L++ +I+ Sbjct: 711 AGGLGLNLQTADTVIIFDSDW------NPQMDQQAEDRAHRIGQKKEVRVFVLVSVGSIE 764 Query: 178 ELVLQRLRTKSTIQDLLLNA 197 E++L+R + K I ++ A Sbjct: 765 EVILERAKQKMGIDAKVIQA 784 >gi|310640172|ref|YP_003944930.1| helicase, swf/snf [Paenibacillus polymyxa SC2] gi|309245122|gb|ADO54689.1| Helicase, SWF/SNF [Paenibacillus polymyxa SC2] Length = 1121 Score = 38.5 bits (88), Expect = 0.57, Method: Compositional matrix adjust. Identities = 22/75 (29%), Positives = 37/75 (49%), Gaps = 6/75 (8%) Query: 104 WNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKR 163 +NEG+ L + G GLNL + ++ + LWW+ +E R + G K+ Sbjct: 1015 FNEGERELFLISLKAGGTGLNLTG-ADTVILYDLWWN-----PAVEEQATNRAHRMGQKK 1068 Query: 164 AVFVYYLIAQNTIDE 178 V V L+AQ T+++ Sbjct: 1069 VVQVIRLVAQGTVED 1083 >gi|159126292|gb|EDP51408.1| SNF2 family helicase, putative [Aspergillus fumigatus A1163] Length = 975 Score = 38.5 bits (88), Expect = 0.57, Method: Compositional matrix adjust. Identities = 28/110 (25%), Positives = 53/110 (48%), Gaps = 9/110 (8%) Query: 92 RTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERI 151 ++ +D T + + + +L A + C GLNL N + WW Q ++R+ Sbjct: 856 KSTARDASTYKFSKDPQCKVLLASLSVCSVGLNL-VAANQAILADSWWAPAIEDQAVDRV 914 Query: 152 GVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 + G KR V+ L+ +NTI++ VL+ + T + L+L A +++ Sbjct: 915 -----YRLGQKRETTVWRLVMENTIEDRVLE---IQDTKRKLMLAAFREK 956 >gi|159489044|ref|XP_001702507.1| predicted protein [Chlamydomonas reinhardtii] gi|158280529|gb|EDP06286.1| predicted protein [Chlamydomonas reinhardtii] Length = 533 Score = 38.5 bits (88), Expect = 0.57, Method: Compositional matrix adjust. Identities = 26/75 (34%), Positives = 37/75 (49%), Gaps = 6/75 (8%) Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 G GLNL G N LV F W+ Q R+ QR + VFVY ++ +I+E Sbjct: 433 GCGLNL-IGANRLVLFDPDWNPANDAQAAARVWRDGQR-----KRVFVYRFLSTGSIEEK 486 Query: 180 VLQRLRTKSTIQDLL 194 V QR +K ++ L+ Sbjct: 487 VFQRQMSKEGLKQLV 501 >gi|147790062|emb|CAN75984.1| hypothetical protein VITISV_012188 [Vitis vinifera] Length = 399 Score = 38.5 bits (88), Expect = 0.57, Method: Compositional matrix adjust. Identities = 24/80 (30%), Positives = 44/80 (55%), Gaps = 6/80 (7%) Query: 118 SCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 + G GLNLQ +++F S W + QM ++ R + G K+ V V+ L++ +I+ Sbjct: 84 AGGLGLNLQTADTVIIFDSDW-----NPQM-DQQAEDRAHRIGQKKEVRVFVLVSVGSIE 137 Query: 178 ELVLQRLRTKSTIQDLLLNA 197 E++L+R + K I ++ A Sbjct: 138 EVILERAKQKMGIDAKVIQA 157 >gi|70998504|ref|XP_753974.1| SNF2 family helicase [Aspergillus fumigatus Af293] gi|66851610|gb|EAL91936.1| SNF2 family helicase, putative [Aspergillus fumigatus Af293] Length = 975 Score = 38.5 bits (88), Expect = 0.57, Method: Compositional matrix adjust. Identities = 30/110 (27%), Positives = 52/110 (47%), Gaps = 9/110 (8%) Query: 92 RTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERI 151 ++ +D T + + + +L A + C GLNL N + WW IE Sbjct: 856 KSTARDASTYKFSKDPQCKVLLASLSVCSVGLNL-VAANQAILADSWW-----APAIEDQ 909 Query: 152 GVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 V R + G KR V+ L+ +NTI++ VL+ + T + L+L A +++ Sbjct: 910 AVDRVYRLGQKRETTVWRLVMENTIEDRVLE---IQDTKRKLMLAAFREK 956 >gi|330506407|ref|YP_004382835.1| SNF2 family helicase [Methanosaeta concilii GP-6] gi|328927215|gb|AEB67017.1| SNF2 family helicase [Methanosaeta concilii GP-6] Length = 1035 Score = 38.5 bits (88), Expect = 0.58, Method: Compositional matrix adjust. Identities = 24/96 (25%), Positives = 43/96 (44%), Gaps = 6/96 (6%) Query: 101 IQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 IQ + +G P+ + G GLNL N + F WW+ +E R + G Sbjct: 908 IQRFQQGSSPIFILSLKAGGFGLNLT-AANHVFHFDRWWN-----PAVENQATDRAFRIG 961 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 K+ VFV+ + T++E + Q + K + + ++ Sbjct: 962 QKKNVFVHKFVCAGTLEERIDQMIEQKKALAESVIG 997 >gi|320581998|gb|EFW96217.1| DNA-dependent ATPase [Pichia angusta DL-1] Length = 828 Score = 38.5 bits (88), Expect = 0.58, Method: Compositional matrix adjust. Identities = 23/78 (29%), Positives = 38/78 (48%), Gaps = 6/78 (7%) Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 G G+NL G N L+ W+ QQ + R+ + G K+ F+Y IA TI+E Sbjct: 667 GCGINL-IGANRLILLDPDWNPASDQQALARVW-----RDGQKKNCFIYRFIATGTIEEK 720 Query: 180 VLQRLRTKSTIQDLLLNA 197 + QR K + ++++ Sbjct: 721 IFQRQSAKMELSTCVVDS 738 >gi|238814383|ref|NP_001154953.1| RAD54-like [Nasonia vitripennis] Length = 749 Score = 38.5 bits (88), Expect = 0.58, Method: Compositional matrix adjust. Identities = 24/77 (31%), Positives = 36/77 (46%), Gaps = 6/77 (7%) Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 G GLNL G N LV F W+ Q + R+ + G K+ FVY + TI+E Sbjct: 584 GCGLNL-VGANRLVMFDPDWNPANDDQAMARVW-----RDGQKKPCFVYRFLCTGTIEEK 637 Query: 180 VLQRLRTKSTIQDLLLN 196 + QR K + +++ Sbjct: 638 IFQRQAHKKALSSTVVD 654 >gi|50294037|ref|XP_449430.1| hypothetical protein [Candida glabrata CBS 138] gi|49528744|emb|CAG62406.1| unnamed protein product [Candida glabrata] Length = 920 Score = 38.5 bits (88), Expect = 0.58, Method: Composition-based stats. Identities = 28/83 (33%), Positives = 39/83 (46%), Gaps = 6/83 (7%) Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 G GLNL G + LV F W+ Q + RI + G KR ++Y LI IDE Sbjct: 712 GVGLNL-IGASRLVLFDNDWNPAVDLQAMSRI-----HREGQKRPCYIYRLITTGCIDEK 765 Query: 180 VLQRLRTKSTIQDLLLNALKKET 202 +LQR K + L++ +T Sbjct: 766 ILQRQLMKHNLTRKFLSSNTSDT 788 >gi|19074741|ref|NP_586247.1| similarity to THE ATPase COMPONENT OF THE TWO-SUBUNIT CHROMATIN REMODELING FACTOR [Encephalitozoon cuniculi GB-M1] gi|19069383|emb|CAD25851.1| similarity to THE ATPase COMPONENT OF THE TWO-SUBUNIT CHROMATIN REMODELING FACTOR [Encephalitozoon cuniculi GB-M1] Length = 823 Score = 38.5 bits (88), Expect = 0.58, Method: Compositional matrix adjust. Identities = 28/93 (30%), Positives = 45/93 (48%), Gaps = 7/93 (7%) Query: 106 EGKIPLLFAHPASCGH-GLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA 164 EG LF G G+NL +++F S W + QM + R + G K+ Sbjct: 417 EGSEKFLFLLTTRAGGLGINLSTADTVILFDSDW-----NPQM-DLQAQDRAHRIGQKKQ 470 Query: 165 VFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 V V+ LI++NT++E ++ R K + D+LL Sbjct: 471 VVVFRLISENTVEERIVYRSLQKLKLDDILLQG 503 >gi|149035611|gb|EDL90292.1| rCG50332, isoform CRA_c [Rattus norvegicus] Length = 568 Score = 38.5 bits (88), Expect = 0.59, Method: Compositional matrix adjust. Identities = 23/77 (29%), Positives = 39/77 (50%), Gaps = 6/77 (7%) Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 G GLNL G N LV F W+ +Q + R+ + G K+ ++Y L++ TI+E Sbjct: 397 GCGLNL-IGANRLVMFDPDWNPANDEQAMARVW-----RDGQKKICYIYRLLSAGTIEEK 450 Query: 180 VLQRLRTKSTIQDLLLN 196 + QR K + +++ Sbjct: 451 IFQRQSHKKALSSCVVD 467 >gi|17539642|ref|NP_502082.1| Phasmid Socket Absent family member (psa-4) [Caenorhabditis elegans] gi|10312098|gb|AAG16655.1|AF230280_1 SWI2/SNF2-like protein [Caenorhabditis elegans] gi|3875463|emb|CAA92768.1| C. elegans protein F01G4.1, confirmed by transcript evidence [Caenorhabditis elegans] gi|3879468|emb|CAA92978.1| C. elegans protein F01G4.1, confirmed by transcript evidence [Caenorhabditis elegans] Length = 1474 Score = 38.5 bits (88), Expect = 0.59, Method: Compositional matrix adjust. Identities = 27/89 (30%), Positives = 42/89 (47%), Gaps = 6/89 (6%) Query: 111 LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYL 170 L + G GLNLQ +++F S W HQ M + R + G K+ V V L Sbjct: 921 LFMLSTRAGGLGLNLQTADTVIIFDSDW---NPHQDMQAQ---DRAHRIGQKKEVRVLRL 974 Query: 171 IAQNTIDELVLQRLRTKSTIQDLLLNALK 199 I N+++E +L R K + + ++ A K Sbjct: 975 ITANSVEEKILAAARYKLNVDEKVIQAGK 1003 >gi|302764876|ref|XP_002965859.1| hypothetical protein SELMODRAFT_84719 [Selaginella moellendorffii] gi|300166673|gb|EFJ33279.1| hypothetical protein SELMODRAFT_84719 [Selaginella moellendorffii] Length = 429 Score = 38.5 bits (88), Expect = 0.59, Method: Compositional matrix adjust. Identities = 26/81 (32%), Positives = 43/81 (53%), Gaps = 8/81 (9%) Query: 118 SCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 +CG G++L G ++V + W R V+R + G K+ V+VY L+ NT++ Sbjct: 296 ACGEGISLVGGSRVVVLDTAW------NPSTVRQAVSRAFRIGQKKKVYVYRLLVGNTLE 349 Query: 178 ELVLQRLRTKSTIQDLLLNAL 198 V ++LR +S +D L AL Sbjct: 350 HEV-EKLR-RSMRKDFLAMAL 368 >gi|254573876|ref|XP_002494047.1| Protein that recognizes and binds damaged DNA in an ATP-dependent manner (with Rad7p) [Pichia pastoris GS115] gi|238033846|emb|CAY71868.1| Protein that recognizes and binds damaged DNA in an ATP-dependent manner (with Rad7p) [Pichia pastoris GS115] Length = 728 Score = 38.5 bits (88), Expect = 0.59, Method: Compositional matrix adjust. Identities = 26/107 (24%), Positives = 54/107 (50%), Gaps = 7/107 (6%) Query: 100 TIQEWNEGKIPLLFAHPASCGH-GLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQ 158 T++E+NE + CG GLNL N +V + WW+ + Q I+R+ + Sbjct: 607 TLKEFNENPETTVLLCSLKCGAIGLNLTIA-NRVVIYDPWWNPQVEDQAIDRV-----YR 660 Query: 159 AGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIHV 205 G + V VY LI +++++E +++ K + + +++ K+ + + Sbjct: 661 FGQTKEVDVYRLIIKDSVEENIVRLQEKKRQVAEAVVDIHGKKKVSL 707 >gi|195380475|ref|XP_002048996.1| GJ21345 [Drosophila virilis] gi|194143793|gb|EDW60189.1| GJ21345 [Drosophila virilis] Length = 714 Score = 38.5 bits (88), Expect = 0.59, Method: Compositional matrix adjust. Identities = 27/99 (27%), Positives = 48/99 (48%), Gaps = 8/99 (8%) Query: 101 IQEWN-EGKIPLLFAHPASCGH-GLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQ 158 IQE+N E +F G G+NL ++++ S W + Q M R + Sbjct: 499 IQEYNMEKSTKFIFLLSTRAGGLGINLATADVVIIYDSDWNPQMDLQAM------DRAHR 552 Query: 159 AGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 G K+ V V+ L+ +NT+DE +++R K + +++ A Sbjct: 553 IGQKKQVRVFRLVTENTVDEKIVERAEVKLRLDRMVIQA 591 >gi|149238896|ref|XP_001525324.1| hypothetical protein LELG_03252 [Lodderomyces elongisporus NRRL YB-4239] gi|206558165|sp|A5E0W5|INO80_LODEL RecName: Full=Putative DNA helicase ino80 gi|146450817|gb|EDK45073.1| hypothetical protein LELG_03252 [Lodderomyces elongisporus NRRL YB-4239] Length = 1575 Score = 38.5 bits (88), Expect = 0.59, Method: Compositional matrix adjust. Identities = 24/78 (30%), Positives = 39/78 (50%), Gaps = 10/78 (12%) Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQM--IERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 G G+NL ++ + S W + Q M R+G TRQ V VY L+ +NTI+ Sbjct: 1390 GLGINLTAADTVVFYDSDWNPTIDSQAMDRAHRLGQTRQ--------VTVYRLLTRNTIE 1441 Query: 178 ELVLQRLRTKSTIQDLLL 195 E + R + K +Q +++ Sbjct: 1442 ERMRDRAKQKEQVQQVVM 1459 >gi|313676698|ref|YP_004054694.1| snf2-related protein [Marivirga tractuosa DSM 4126] gi|312943396|gb|ADR22586.1| SNF2-related protein [Marivirga tractuosa DSM 4126] Length = 976 Score = 38.5 bits (88), Expect = 0.60, Method: Compositional matrix adjust. Identities = 29/94 (30%), Positives = 45/94 (47%), Gaps = 13/94 (13%) Query: 118 SCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 + G GLNL + + WW+ IE+ V R + G K+ VF Y I +NT++ Sbjct: 885 AGGLGLNLT-AADYVFLLDPWWN-----PAIEQQAVDRAHRIGQKQQVFTYKFITKNTVE 938 Query: 178 ELVLQRLRTKSTI-QDLL------LNALKKETIH 204 E +L K T+ +DL+ + +L KE I Sbjct: 939 EKILALQEKKLTLARDLISTEESFMKSLSKEDIQ 972 >gi|303391164|ref|XP_003073812.1| SNF2 DNA/RNA helicase [Encephalitozoon intestinalis ATCC 50506] gi|303302960|gb|ADM12452.1| SNF2 DNA/RNA helicase [Encephalitozoon intestinalis ATCC 50506] Length = 823 Score = 38.5 bits (88), Expect = 0.60, Method: Compositional matrix adjust. Identities = 24/78 (30%), Positives = 41/78 (52%), Gaps = 6/78 (7%) Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 G G+NL +++F S W + QM + R + G K+ V V+ LI++NT++E Sbjct: 432 GLGINLSTADTVILFDSDW-----NPQM-DLQAQDRAHRIGQKKQVVVFRLISENTVEER 485 Query: 180 VLQRLRTKSTIQDLLLNA 197 ++ R K + D+LL Sbjct: 486 IVYRSLQKLKLDDILLQG 503 >gi|302794729|ref|XP_002979128.1| hypothetical protein SELMODRAFT_110695 [Selaginella moellendorffii] gi|300152896|gb|EFJ19536.1| hypothetical protein SELMODRAFT_110695 [Selaginella moellendorffii] Length = 851 Score = 38.5 bits (88), Expect = 0.61, Method: Compositional matrix adjust. Identities = 21/65 (32%), Positives = 35/65 (53%), Gaps = 6/65 (9%) Query: 118 SCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 + G GLNL N+ + WW+ +Q ++R+ + G R V V+ LIA ++I+ Sbjct: 758 AAGVGLNLVTASNVFMM-DPWWNPAVEEQAMDRV-----HRLGQTRDVHVFRLIATDSIE 811 Query: 178 ELVLQ 182 E +LQ Sbjct: 812 ERLLQ 816 >gi|254569384|ref|XP_002491802.1| Member of the imitation-switch (ISWI) class of ATP-dependent chromatin remodeling complexes [Pichia pastoris GS115] gi|238031599|emb|CAY69522.1| Member of the imitation-switch (ISWI) class of ATP-dependent chromatin remodeling complexes [Pichia pastoris GS115] Length = 1061 Score = 38.5 bits (88), Expect = 0.61, Method: Compositional matrix adjust. Identities = 25/80 (31%), Positives = 42/80 (52%), Gaps = 10/80 (12%) Query: 118 SCGHGLNLQYGGNILVFFSLWWDLEEHQQM--IERIGVTRQRQAGFKRAVFVYYLIAQNT 175 + G G+NL ++++ S W + Q M RIG T+Q V+VY L+ +N Sbjct: 544 AGGLGINLTSADTVILYDSDWNPQADLQAMDRAHRIGQTKQ--------VYVYRLVTENA 595 Query: 176 IDELVLQRLRTKSTIQDLLL 195 I+E VL+R + K + L++ Sbjct: 596 IEEKVLERAQQKLRLDQLVI 615 >gi|332173366|gb|AEE22620.1| SNF2-related protein [Glaciecola agarilytica 4H-3-7+YE-5] Length = 1440 Score = 38.5 bits (88), Expect = 0.62, Method: Compositional matrix adjust. Identities = 25/97 (25%), Positives = 43/97 (44%), Gaps = 6/97 (6%) Query: 99 CTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQ 158 ++ + G+ + + G GLNL + ++ WW+ +E R + Sbjct: 1328 ASVNAFQRGQGDIFLISLKAGGSGLNLT-AADYVIHMDPWWN-----PAVEEQASDRAHR 1381 Query: 159 AGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 G R V +Y LI QNTI+E ++ + K + D LL Sbjct: 1382 IGQLRPVTIYRLITQNTIEEKIVALHKQKRDLADNLL 1418 >gi|330803641|ref|XP_003289812.1| hypothetical protein DICPUDRAFT_36354 [Dictyostelium purpureum] gi|325080071|gb|EGC33642.1| hypothetical protein DICPUDRAFT_36354 [Dictyostelium purpureum] Length = 731 Score = 38.5 bits (88), Expect = 0.62, Method: Composition-based stats. Identities = 25/77 (32%), Positives = 41/77 (53%), Gaps = 6/77 (7%) Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 G G+NL GGN LV + W+ Q +ER+ + G + VF+Y L + TI+E Sbjct: 462 GVGINL-IGGNHLVLYDPDWNPAIDIQAMERVW-----REGQNKPVFIYRLFSTGTIEEK 515 Query: 180 VLQRLRTKSTIQDLLLN 196 + QR K +I + +++ Sbjct: 516 IYQRQLMKESISNSIVD 532 >gi|296328143|ref|ZP_06870674.1| Snf2 family helicase [Fusobacterium nucleatum subsp. nucleatum ATCC 23726] gi|296154655|gb|EFG95441.1| Snf2 family helicase [Fusobacterium nucleatum subsp. nucleatum ATCC 23726] Length = 225 Score = 38.5 bits (88), Expect = 0.62, Method: Compositional matrix adjust. Identities = 22/95 (23%), Positives = 42/95 (44%), Gaps = 6/95 (6%) Query: 101 IQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 ++ + +PL + G GLNL +++ WW++ Q R + G Sbjct: 115 VENFQNEAVPLFLISLKAGGTGLNLTKAS-VVIHLDPWWNISVQNQ-----ATDRAHRIG 168 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 + V ++ LI +NTI+E +L K + D+ + Sbjct: 169 QEDTVQLFNLITKNTIEEKILNLQSKKKELSDIFV 203 >gi|288559877|ref|YP_003423363.1| helicase SNF2 family [Methanobrevibacter ruminantium M1] gi|288542587|gb|ADC46471.1| helicase SNF2 family [Methanobrevibacter ruminantium M1] Length = 698 Score = 38.5 bits (88), Expect = 0.62, Method: Compositional matrix adjust. Identities = 22/77 (28%), Positives = 39/77 (50%), Gaps = 6/77 (7%) Query: 111 LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYL 170 +L A + G GLNL N+ + + LWW+ Q +R+ + G ++ V VY Sbjct: 597 ILIATLKTGGVGLNLTAASNV-IHYDLWWNPAVENQATDRV-----HRIGQEKDVMVYRF 650 Query: 171 IAQNTIDELVLQRLRTK 187 I + T++E + ++TK Sbjct: 651 ITKGTLEEEIDSIIKTK 667 >gi|294867966|ref|XP_002765317.1| DNA repair helicase, putative [Perkinsus marinus ATCC 50983] gi|239865330|gb|EEQ98034.1| DNA repair helicase, putative [Perkinsus marinus ATCC 50983] Length = 1182 Score = 38.5 bits (88), Expect = 0.62, Method: Composition-based stats. Identities = 29/98 (29%), Positives = 48/98 (48%), Gaps = 11/98 (11%) Query: 111 LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYL 170 LL ++ G GLNLQ ++ + WW+ +Q I+R + G ++ V ++L Sbjct: 1082 LLLVSISAGGEGLNLQRASHVFIL-DPWWNPAVEKQAIQRC-----HRLGQQQIVRSHHL 1135 Query: 171 IAQNTIDELVLQRLRTKSTIQDLLL-----NALKKETI 203 I++NTI+E + K I D + AL+K TI Sbjct: 1136 ISENTIEERIKALQEKKQLIFDGTIGGNFNGALEKLTI 1173 >gi|224099763|ref|XP_002311608.1| chromatin remodeling complex subunit [Populus trichocarpa] gi|222851428|gb|EEE88975.1| chromatin remodeling complex subunit [Populus trichocarpa] Length = 1131 Score = 38.5 bits (88), Expect = 0.62, Method: Compositional matrix adjust. Identities = 23/80 (28%), Positives = 44/80 (55%), Gaps = 6/80 (7%) Query: 118 SCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 + G GLNLQ +++F S W + QM ++ R + G K+ V V+ L++ +++ Sbjct: 805 AGGLGLNLQTADTVIIFDSDW-----NPQM-DQQAEDRAHRIGQKKEVRVFVLVSVGSVE 858 Query: 178 ELVLQRLRTKSTIQDLLLNA 197 E++L+R + K I ++ A Sbjct: 859 EVILERAKQKKGIDAKVIQA 878 >gi|154488700|ref|ZP_02029549.1| hypothetical protein BIFADO_02007 [Bifidobacterium adolescentis L2-32] gi|154082837|gb|EDN81882.1| hypothetical protein BIFADO_02007 [Bifidobacterium adolescentis L2-32] Length = 721 Score = 38.5 bits (88), Expect = 0.62, Method: Compositional matrix adjust. Identities = 27/92 (29%), Positives = 43/92 (46%), Gaps = 10/92 (10%) Query: 111 LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYL 170 +L A + G GLN+Q +++ + + IE ++R + G R V VY L Sbjct: 586 VLVAQIVAGGTGLNIQSASVVIICEP------QLKPSIENQAISRAYRMGQARNVLVYRL 639 Query: 171 IAQNTIDELVLQRLRTKSTIQDLLLNALKKET 202 +A+NTIDE + L K + NA E+ Sbjct: 640 LAENTIDEKITDILARKQEV----FNAFANES 667 >gi|326430759|gb|EGD76329.1| hypothetical protein PTSG_01031 [Salpingoeca sp. ATCC 50818] Length = 752 Score = 38.5 bits (88), Expect = 0.63, Method: Compositional matrix adjust. Identities = 23/64 (35%), Positives = 32/64 (50%), Gaps = 6/64 (9%) Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 G GLNL G N LV F W+ +Q + R+ + G + FVY + TI+E Sbjct: 559 GCGLNL-IGANRLVMFDPDWNPANDEQAMARVW-----RDGQTKLCFVYRFVTTGTIEEK 612 Query: 180 VLQR 183 +LQR Sbjct: 613 ILQR 616 >gi|326332924|ref|ZP_08199181.1| SNF2/helicase domain protein [Nocardioidaceae bacterium Broad-1] gi|325949282|gb|EGD41365.1| SNF2/helicase domain protein [Nocardioidaceae bacterium Broad-1] Length = 1055 Score = 38.5 bits (88), Expect = 0.63, Method: Composition-based stats. Identities = 42/182 (23%), Positives = 76/182 (41%), Gaps = 18/182 (9%) Query: 18 ENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHF 77 +N A SA ++ L L G V +++ D + +E + + + A +V F Sbjct: 858 DNRVAILSALTRLRQLSLDPGLVDPEDDHVGSAKLDTLVDHIEELAAEGHKA--LVFSQF 915 Query: 78 NSDLAR---------LQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYG 128 S L R + A+ G T D+ I+ + +G P+ + G GL L Sbjct: 916 TSFLGRARTRLAEAGIDAAYLDGATRDRG-AVIESFRDGDAPVFLISLKAGGVGLTLTEA 974 Query: 129 GNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKS 188 + V WW+ Q ++R + G + V VY L++ +TI+E V++ K+ Sbjct: 975 DYVFVL-DPWWNPAAEAQAVDR-----AHRIGQTQHVMVYRLVSTDTIEEKVMELKERKA 1028 Query: 189 TI 190 + Sbjct: 1029 EL 1030 >gi|302802704|ref|XP_002983106.1| hypothetical protein SELMODRAFT_117561 [Selaginella moellendorffii] gi|300149259|gb|EFJ15915.1| hypothetical protein SELMODRAFT_117561 [Selaginella moellendorffii] Length = 429 Score = 38.5 bits (88), Expect = 0.63, Method: Compositional matrix adjust. Identities = 26/81 (32%), Positives = 43/81 (53%), Gaps = 8/81 (9%) Query: 118 SCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 +CG G++L G ++V + W R V+R + G K+ V+VY L+ NT++ Sbjct: 296 ACGEGISLVGGSRVVVLDTAW------NPSTVRQAVSRAFRIGQKKKVYVYRLLVGNTLE 349 Query: 178 ELVLQRLRTKSTIQDLLLNAL 198 V ++LR +S +D L AL Sbjct: 350 HEV-EKLR-RSMRKDFLAMAL 368 >gi|50414862|gb|AAH77794.1| HELLS protein [Xenopus laevis] Length = 756 Score = 38.5 bits (88), Expect = 0.63, Method: Compositional matrix adjust. Identities = 25/79 (31%), Positives = 40/79 (50%), Gaps = 12/79 (15%) Query: 120 GHGLNLQYGGNILVFFSLW---WDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTI 176 G G+NL ++++ S W DL+ Q RIG TR V VY L+ NTI Sbjct: 681 GLGINLTAADTVIIYDSDWNPQADLQ-AQDRCHRIGQTR--------PVVVYRLVTANTI 731 Query: 177 DELVLQRLRTKSTIQDLLL 195 D+ +++R K ++ L++ Sbjct: 732 DQKIVERAAAKRKLEKLVI 750 >gi|307203835|gb|EFN82771.1| DNA repair and recombination protein RAD54-like [Harpegnathos saltator] Length = 679 Score = 38.1 bits (87), Expect = 0.64, Method: Compositional matrix adjust. Identities = 24/77 (31%), Positives = 37/77 (48%), Gaps = 6/77 (7%) Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 G GLNL G N LV F W+ Q + R+ + G K+ FVY ++ TI+E Sbjct: 515 GCGLNL-IGANRLVMFDPDWNPANDDQAMARVW-----RDGQKKPCFVYRFLSTGTIEEK 568 Query: 180 VLQRLRTKSTIQDLLLN 196 + QR K + +++ Sbjct: 569 IFQRQAHKKALSSTVVD 585 >gi|255956043|ref|XP_002568774.1| Pc21g17780 [Penicillium chrysogenum Wisconsin 54-1255] gi|211590485|emb|CAP96675.1| Pc21g17780 [Penicillium chrysogenum Wisconsin 54-1255] Length = 1331 Score = 38.1 bits (87), Expect = 0.64, Method: Compositional matrix adjust. Identities = 24/80 (30%), Positives = 39/80 (48%), Gaps = 12/80 (15%) Query: 120 GHGLNLQYGGNILVF---FSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTI 176 G GLN+Q +++F F+ W E + R + G K+ VFVY L+A T+ Sbjct: 1164 GVGLNIQTANRVVIFDFEFNPTW---------EEQAIGRAYRIGQKKKVFVYRLVAAGTV 1214 Query: 177 DELVLQRLRTKSTIQDLLLN 196 +E + + KS + LL+ Sbjct: 1215 EEKIFCKATFKSQLAGRLLD 1234 >gi|254452793|ref|ZP_05066230.1| helicase, Snf2 family [Octadecabacter antarcticus 238] gi|198267199|gb|EDY91469.1| helicase, Snf2 family [Octadecabacter antarcticus 238] Length = 970 Score = 38.1 bits (87), Expect = 0.64, Method: Compositional matrix adjust. Identities = 25/107 (23%), Positives = 45/107 (42%), Gaps = 7/107 (6%) Query: 91 GRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 G+T D+ I ++ G + + G GLNL + ++ + WW+ +ER Sbjct: 850 GQTRDRS-SEIDKFQSGDAQVFLISLKAGGTGLNLT-AADTVILYDPWWN-----PAVER 902 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + R + G + VFVY L + T++ + K + D L Sbjct: 903 QAMDRAHRIGQDKPVFVYRLYTEGTVESAIQNMQARKQALADALFEG 949 >gi|196008607|ref|XP_002114169.1| hypothetical protein TRIADDRAFT_27976 [Trichoplax adhaerens] gi|190583188|gb|EDV23259.1| hypothetical protein TRIADDRAFT_27976 [Trichoplax adhaerens] Length = 687 Score = 38.1 bits (87), Expect = 0.64, Method: Compositional matrix adjust. Identities = 23/64 (35%), Positives = 34/64 (53%), Gaps = 6/64 (9%) Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 G GLNL G + LV + + W+ Q + RI + G KR V++Y L+ TI+E Sbjct: 574 GTGLNL-IGASRLVLYDIDWNPANDLQAMARIW-----RDGQKRDVYIYRLVTTGTIEEK 627 Query: 180 VLQR 183 + QR Sbjct: 628 IFQR 631 >gi|145497571|ref|XP_001434774.1| hypothetical protein [Paramecium tetraurelia strain d4-2] gi|124401902|emb|CAK67377.1| unnamed protein product [Paramecium tetraurelia] Length = 954 Score = 38.1 bits (87), Expect = 0.64, Method: Compositional matrix adjust. Identities = 27/100 (27%), Positives = 52/100 (52%), Gaps = 9/100 (9%) Query: 90 QGRTLDKD--PCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQM 147 QG+ +DK+ +I+++ E +I ++ + +G+NL ++L+ WW+ Q Sbjct: 829 QGK-MDKNQRKASIKDFFEKQITVMLISLKAGAYGINLSCANHVLLV-DPWWNPAVEDQA 886 Query: 148 IERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTK 187 +ER+ + G ++ V + I NTI+E VLQ + K Sbjct: 887 VERV-----HRLGQQKQVQIVSFICDNTIEERVLQMHKMK 921 >gi|50302399|ref|XP_451134.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140] gi|49640265|emb|CAH02722.1| KLLA0A03069p [Kluyveromyces lactis] Length = 895 Score = 38.1 bits (87), Expect = 0.64, Method: Compositional matrix adjust. Identities = 24/91 (26%), Positives = 43/91 (47%), Gaps = 6/91 (6%) Query: 106 EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 EG+ + + G G+NL G N L+ W+ QQ + R+ + G K+ Sbjct: 720 EGQEFIFLLSSKAGGCGINL-IGANRLILLDPDWNPAADQQALARVW-----RDGQKKDC 773 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 F+Y I+ TI+E + QR K ++ +++ Sbjct: 774 FIYRFISTGTIEEKIFQRQSMKMSLSSCVVD 804 >gi|255552930|ref|XP_002517508.1| ATP-dependent helicase, putative [Ricinus communis] gi|223543519|gb|EEF45050.1| ATP-dependent helicase, putative [Ricinus communis] Length = 1138 Score = 38.1 bits (87), Expect = 0.65, Method: Composition-based stats. Identities = 24/99 (24%), Positives = 52/99 (52%), Gaps = 8/99 (8%) Query: 101 IQEWNEGK--IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQ 158 I+++N+ K ++ A +C G+NL G + +V + W+ + R ++R + Sbjct: 990 IKDFNDRKSEAKVMLASTKACSEGINL-VGASRVVLLDVVWN-----PSVVRQAISRAYR 1043 Query: 159 AGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 G ++ V++Y+LIA T++E R K + +L+ ++ Sbjct: 1044 LGQEKVVYIYHLIASETLEEDKYCRQAEKERLSELVFDS 1082 >gi|292630869|sp|B3LN76|RDH54_YEAS1 RecName: Full=DNA repair and recombination protein RDH54; AltName: Full=RAD homolog 54; AltName: Full=Recombination factor TID1; AltName: Full=Two hybrid interaction with DMC1 protein 1; Includes: RecName: Full=DNA topoisomerase; Includes: RecName: Full=Putative helicase gi|190408764|gb|EDV12029.1| helicase [Saccharomyces cerevisiae RM11-1a] Length = 924 Score = 38.1 bits (87), Expect = 0.65, Method: Composition-based stats. Identities = 26/78 (33%), Positives = 38/78 (48%), Gaps = 6/78 (7%) Query: 118 SCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 S G GLNL G + L+ F W+ Q + RI + G K+ F+Y L+ ID Sbjct: 708 SGGVGLNL-VGASRLILFDNDWNPSVDLQAMSRI-----HRDGQKKPCFIYRLVTTGCID 761 Query: 178 ELVLQRLRTKSTIQDLLL 195 E +LQR K+++ L Sbjct: 762 EKILQRQLMKNSLSQKFL 779 >gi|323508306|emb|CBQ68177.1| related to INO80-ATPase with chromatin remodeling and helicase activity [Sporisorium reilianum] Length = 1910 Score = 38.1 bits (87), Expect = 0.65, Method: Composition-based stats. Identities = 22/76 (28%), Positives = 40/76 (52%), Gaps = 6/76 (7%) Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 G G+NL + ++F+ W+ Q ++R + G + V VY LI + TIDE Sbjct: 1663 GLGINLT-AADTVIFYDHDWNPSNDSQAMDR-----AHRLGQTKQVTVYRLITKGTIDER 1716 Query: 180 VLQRLRTKSTIQDLLL 195 +++ R K +QD+++ Sbjct: 1717 IVRLARNKKEVQDIVV 1732 >gi|262066952|ref|ZP_06026564.1| SWF/SNF family helicase [Fusobacterium periodonticum ATCC 33693] gi|291379300|gb|EFE86818.1| SWF/SNF family helicase [Fusobacterium periodonticum ATCC 33693] Length = 896 Score = 38.1 bits (87), Expect = 0.66, Method: Composition-based stats. Identities = 26/106 (24%), Positives = 50/106 (47%), Gaps = 6/106 (5%) Query: 91 GRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 G+T D+ + ++ + + + G GLNL I ++ WW+ + +E Sbjct: 777 GQTKDRQSLVDKFQSDDRYKVFVMTLKTGGVGLNLVSADTIFIY-DPWWN-----KTVEN 830 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + R + G + VF Y +I +NTI+E +L+ K + D L++ Sbjct: 831 QAIDRAYRLGQDKTVFAYKMIMRNTIEEKILKLQEIKDKLLDDLIS 876 >gi|238882009|gb|EEQ45647.1| SNF2-family ATP dependent chromatin remodeling factor snf21 [Candida albicans WO-1] Length = 1680 Score = 38.1 bits (87), Expect = 0.66, Method: Compositional matrix adjust. Identities = 24/82 (29%), Positives = 42/82 (51%), Gaps = 6/82 (7%) Query: 118 SCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 + G GLNLQ +++F + W HQ + + R + G K V + LI +N+++ Sbjct: 1172 AGGLGLNLQTADTVIIFDTDW---NPHQDLQAQ---DRAHRIGQKNEVRILRLITENSVE 1225 Query: 178 ELVLQRLRTKSTIQDLLLNALK 199 E++L+R K I ++ A K Sbjct: 1226 EMILERAHKKLEIDGKVIQAGK 1247 >gi|193084170|gb|ACF09835.1| helicase SNF2/RAD54 family [uncultured marine crenarchaeote AD1000-207-H3] Length = 569 Score = 38.1 bits (87), Expect = 0.66, Method: Compositional matrix adjust. Identities = 30/97 (30%), Positives = 44/97 (45%), Gaps = 6/97 (6%) Query: 100 TIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQA 159 I + G LL A + G+NL ++F L W H+Q +R+ + Sbjct: 453 NIDYFQNGDTKLLIAGLRAGNLGINLTRA-KYVIFAELDWVPAVHRQAEDRL-----HRI 506 Query: 160 GFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 G K VF YYLI + T+DE V L KS D +++ Sbjct: 507 GQKNTVFAYYLIGKRTLDEHVANILVDKSYEIDAIMD 543 >gi|68467034|ref|XP_722432.1| hypothetical protein CaO19.9102 [Candida albicans SC5314] gi|46444408|gb|EAL03683.1| hypothetical protein CaO19.9102 [Candida albicans SC5314] Length = 1690 Score = 38.1 bits (87), Expect = 0.66, Method: Compositional matrix adjust. Identities = 24/82 (29%), Positives = 42/82 (51%), Gaps = 6/82 (7%) Query: 118 SCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 + G GLNLQ +++F + W HQ + + R + G K V + LI +N+++ Sbjct: 1180 AGGLGLNLQTADTVIIFDTDW---NPHQDLQAQ---DRAHRIGQKNEVRILRLITENSVE 1233 Query: 178 ELVLQRLRTKSTIQDLLLNALK 199 E++L+R K I ++ A K Sbjct: 1234 EMILERAHKKLEIDGKVIQAGK 1255 >gi|307174075|gb|EFN64762.1| DNA repair and recombination protein RAD54-like [Camponotus floridanus] Length = 682 Score = 38.1 bits (87), Expect = 0.67, Method: Compositional matrix adjust. Identities = 24/77 (31%), Positives = 37/77 (48%), Gaps = 6/77 (7%) Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 G GLNL G N LV F W+ Q + R+ + G K+ FVY ++ TI+E Sbjct: 518 GCGLNL-IGANRLVMFDPDWNPANDDQAMARVW-----RDGQKKTCFVYRFLSTGTIEEK 571 Query: 180 VLQRLRTKSTIQDLLLN 196 + QR K + +++ Sbjct: 572 IFQRQAHKKALSSTVVD 588 >gi|255724370|ref|XP_002547114.1| SNF2-family ATP dependent chromatin remodeling factor snf21 [Candida tropicalis MYA-3404] gi|240135005|gb|EER34559.1| SNF2-family ATP dependent chromatin remodeling factor snf21 [Candida tropicalis MYA-3404] Length = 1680 Score = 38.1 bits (87), Expect = 0.67, Method: Compositional matrix adjust. Identities = 24/82 (29%), Positives = 42/82 (51%), Gaps = 6/82 (7%) Query: 118 SCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 + G GLNLQ +++F + W HQ + + R + G K V + LI +N+++ Sbjct: 1180 AGGLGLNLQTADTVIIFDTDW---NPHQDLQAQ---DRAHRIGQKNEVRILRLITENSVE 1233 Query: 178 ELVLQRLRTKSTIQDLLLNALK 199 E++L+R K I ++ A K Sbjct: 1234 EMILERAHAKLEIDGKVIQAGK 1255 >gi|257094640|ref|YP_003168281.1| Non-specific serine/threonine protein kinase [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] gi|257047164|gb|ACV36352.1| Non-specific serine/threonine protein kinase [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] Length = 1003 Score = 38.1 bits (87), Expect = 0.67, Method: Composition-based stats. Identities = 31/135 (22%), Positives = 59/135 (43%), Gaps = 16/135 (11%) Query: 71 IIVAYHFNSDLARLQKAFP---------QGRTLDKDPCTIQEWNEGKIPLLFAHPASCGH 121 I++ F S LA ++K G T D++ ++ + ++P+ + G Sbjct: 853 ILLFSQFTSMLALIEKELKLAGIDYVILTGDTRDRE-AQVRRFQACEVPVFLISLKTGGV 911 Query: 122 GLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVL 181 GLNL + ++ + WW+ Q +R + G + VFVY LI +I+E +L Sbjct: 912 GLNLT-AADTVIHYDPWWNPAAENQATDR-----AHRLGQDKPVFVYKLIVAGSIEEKIL 965 Query: 182 QRLRTKSTIQDLLLN 196 K+ + +L+ Sbjct: 966 ALQERKAELAAHILS 980 >gi|292630891|sp|B5VE38|RDH54_YEAS6 RecName: Full=DNA repair and recombination protein RDH54; AltName: Full=RAD homolog 54; AltName: Full=Recombination factor TID1; AltName: Full=Two hybrid interaction with DMC1 protein 1; Includes: RecName: Full=DNA topoisomerase; Includes: RecName: Full=Putative helicase gi|207347718|gb|EDZ73802.1| YBR073Wp-like protein [Saccharomyces cerevisiae AWRI1631] Length = 924 Score = 38.1 bits (87), Expect = 0.67, Method: Composition-based stats. Identities = 26/78 (33%), Positives = 38/78 (48%), Gaps = 6/78 (7%) Query: 118 SCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 S G GLNL G + L+ F W+ Q + RI + G K+ F+Y L+ ID Sbjct: 708 SGGVGLNL-VGASRLILFDNDWNPSVDLQAMSRI-----HRDGQKKPCFIYRLVTTGCID 761 Query: 178 ELVLQRLRTKSTIQDLLL 195 E +LQR K+++ L Sbjct: 762 EKILQRQLMKNSLSQKFL 779 >gi|292630870|sp|A6ZL17|RDH54_YEAS7 RecName: Full=DNA repair and recombination protein RDH54; AltName: Full=RAD homolog 54; AltName: Full=Recombination factor TID1; AltName: Full=Two hybrid interaction with DMC1 protein 1; Includes: RecName: Full=DNA topoisomerase; Includes: RecName: Full=Putative helicase gi|151946464|gb|EDN64686.1| rad54-like protein [Saccharomyces cerevisiae YJM789] Length = 924 Score = 38.1 bits (87), Expect = 0.67, Method: Composition-based stats. Identities = 26/78 (33%), Positives = 38/78 (48%), Gaps = 6/78 (7%) Query: 118 SCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 S G GLNL G + L+ F W+ Q + RI + G K+ F+Y L+ ID Sbjct: 708 SGGVGLNL-VGASRLILFDNDWNPSVDLQAMSRI-----HRDGQKKPCFIYRLVTTGCID 761 Query: 178 ELVLQRLRTKSTIQDLLL 195 E +LQR K+++ L Sbjct: 762 EKILQRQLMKNSLSQKFL 779 >gi|88857070|ref|ZP_01131713.1| helicase [Pseudoalteromonas tunicata D2] gi|88820267|gb|EAR30079.1| helicase [Pseudoalteromonas tunicata D2] Length = 1402 Score = 38.1 bits (87), Expect = 0.67, Method: Compositional matrix adjust. Identities = 24/76 (31%), Positives = 37/76 (48%), Gaps = 6/76 (7%) Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 G GLNL + ++ WW+ +E R + G +R V VY LIA+ TI+E Sbjct: 1311 GSGLNLT-AADYVIHMDPWWN-----PAVEEQASDRAHRMGQQRPVTVYRLIAKGTIEEQ 1364 Query: 180 VLQRLRTKSTIQDLLL 195 ++ + K + D LL Sbjct: 1365 IVAMHQHKRDLADTLL 1380 >gi|68466749|ref|XP_722570.1| hypothetical protein CaO19.1526 [Candida albicans SC5314] gi|46444555|gb|EAL03829.1| hypothetical protein CaO19.1526 [Candida albicans SC5314] gi|74099650|gb|AAZ99066.1| Swi/Snf core member protein [Candida albicans] Length = 1690 Score = 38.1 bits (87), Expect = 0.67, Method: Compositional matrix adjust. Identities = 24/82 (29%), Positives = 42/82 (51%), Gaps = 6/82 (7%) Query: 118 SCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 + G GLNLQ +++F + W HQ + + R + G K V + LI +N+++ Sbjct: 1180 AGGLGLNLQTADTVIIFDTDW---NPHQDLQAQ---DRAHRIGQKNEVRILRLITENSVE 1233 Query: 178 ELVLQRLRTKSTIQDLLLNALK 199 E++L+R K I ++ A K Sbjct: 1234 EMILERAHKKLEIDGKVIQAGK 1255 >gi|46108786|ref|XP_381451.1| hypothetical protein FG01275.1 [Gibberella zeae PH-1] Length = 1023 Score = 38.1 bits (87), Expect = 0.67, Method: Compositional matrix adjust. Identities = 30/106 (28%), Positives = 50/106 (47%), Gaps = 7/106 (6%) Query: 101 IQEWNE-GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQA 159 I E+NE IP+ + G G+NL +++F D ++ Q + R + Sbjct: 903 IDEFNEDSDIPVFLLTTGAGGTGINLTAANKVIIF-----DQSDNPQ-DDIQAENRAHRL 956 Query: 160 GFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIHV 205 G KR V + LIA NTI+EL+ + + K + + + A+ E V Sbjct: 957 GQKRDVEIIRLIATNTIEELIYKACQKKIELANKVTGAVADEDPAV 1002 >gi|198430961|ref|XP_002124279.1| PREDICTED: similar to MGC115661 protein [Ciona intestinalis] Length = 831 Score = 38.1 bits (87), Expect = 0.68, Method: Compositional matrix adjust. Identities = 34/111 (30%), Positives = 54/111 (48%), Gaps = 15/111 (13%) Query: 80 DLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWW 139 D R+ + P R + QE + K+ LL A+ G L + +++VF L+W Sbjct: 591 DYIRIDGSTPSERR-QTEVARFQENSSCKVALLSITAANMGITL---HSASLVVFAELFW 646 Query: 140 D---LEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTK 187 + L + + RIG QR V V+YLIA+NT D+L+ Q ++ K Sbjct: 647 NPGILVQAEDRCYRIG---QRDV-----VNVHYLIAKNTADDLIWQMIKKK 689 >gi|145342259|ref|XP_001416174.1| Swr1-Pie_related helicase [Ostreococcus lucimarinus CCE9901] gi|144576399|gb|ABO94467.1| Swr1-Pie_related helicase [Ostreococcus lucimarinus CCE9901] Length = 1053 Score = 38.1 bits (87), Expect = 0.68, Method: Compositional matrix adjust. Identities = 27/96 (28%), Positives = 48/96 (50%), Gaps = 7/96 (7%) Query: 101 IQEWNEGKIPLLFA-HPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQA 159 +Q +N K +F S G G+NL G + ++F+ W+ QQ +R + Sbjct: 870 MQRFNSDKRLFVFILSTRSGGFGINLT-GADTVIFYDSDWNPAMDQQAQDRC-----HRI 923 Query: 160 GFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 G R V +Y LI++ TI+E +LQ+ K + ++ + Sbjct: 924 GQTREVHIYRLISEGTIEESILQKAVQKRELDNMAI 959 >gi|327538183|gb|EGF24865.1| SWF/SNF family helicase [Rhodopirellula baltica WH47] Length = 966 Score = 38.1 bits (87), Expect = 0.68, Method: Composition-based stats. Identities = 24/82 (29%), Positives = 39/82 (47%), Gaps = 6/82 (7%) Query: 101 IQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 + + G+ L + G GLNL + ++ WW+ +E R + G Sbjct: 855 VDAFQNGEGDLFLISLKAGGTGLNLT-AADYVLHLDPWWN-----PAVEDQATDRAHRIG 908 Query: 161 FKRAVFVYYLIAQNTIDELVLQ 182 +RAV VY L+A+ TI+E +LQ Sbjct: 909 QERAVTVYRLVAERTIEEQILQ 930 >gi|326381641|ref|ZP_08203335.1| SNF2-like protein [Gordonia neofelifaecis NRRL B-59395] gi|326199888|gb|EGD57068.1| SNF2-like protein [Gordonia neofelifaecis NRRL B-59395] Length = 1154 Score = 38.1 bits (87), Expect = 0.70, Method: Composition-based stats. Identities = 25/96 (26%), Positives = 44/96 (45%), Gaps = 6/96 (6%) Query: 101 IQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 I+++ +G+ + + G GLNL + WW+ Q ++R + G Sbjct: 1046 IEQFTDGRTRVFLISLKAGGFGLNLT-AADYCFMTDPWWNPAAEAQAVDR-----AHRIG 1099 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 RAV VY +++ TI+E V+ K + D LL+ Sbjct: 1100 QHRAVTVYRMVSTGTIEEKVIDLQTRKRELFDALLD 1135 >gi|89095677|ref|ZP_01168571.1| hypothetical protein B14911_03069 [Bacillus sp. NRRL B-14911] gi|89089423|gb|EAR68530.1| hypothetical protein B14911_03069 [Bacillus sp. NRRL B-14911] Length = 942 Score = 38.1 bits (87), Expect = 0.70, Method: Compositional matrix adjust. Identities = 25/97 (25%), Positives = 45/97 (46%), Gaps = 6/97 (6%) Query: 101 IQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 I + +G+ P+ + G GLNL N ++ + WW+ +E R + G Sbjct: 833 ITRFQDGEFPVFLLSLKAGGTGLNLTA-ANHVIHYDRWWN-----PAVENQATDRAYRIG 886 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 +R V V+ LI T++E + L K T+ D ++ + Sbjct: 887 QERFVHVHKLICTGTLEEKIDLMLEKKQTLNDQVIQS 923 >gi|71033491|ref|XP_766387.1| hypothetical protein [Theileria parva strain Muguga] gi|68353344|gb|EAN34104.1| hypothetical protein TP01_0866 [Theileria parva] Length = 1816 Score = 38.1 bits (87), Expect = 0.70, Method: Compositional matrix adjust. Identities = 20/81 (24%), Positives = 41/81 (50%), Gaps = 6/81 (7%) Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 G G+NL ++++ S W + Q R + G + V +Y L+ +++I++ Sbjct: 1196 GLGINLTSADTVIIYDSDWNPQNDLQ------AEARAHRIGQTKTVQIYRLVTKDSIEQT 1249 Query: 180 VLQRLRTKSTIQDLLLNALKK 200 +L+R +TK + L++ L K Sbjct: 1250 ILERAKTKMVLDALVVQGLNK 1270 >gi|269119290|ref|YP_003307467.1| SNF2-related protein [Sebaldella termitidis ATCC 33386] gi|268613168|gb|ACZ07536.1| SNF2-related protein [Sebaldella termitidis ATCC 33386] Length = 1125 Score = 38.1 bits (87), Expect = 0.70, Method: Composition-based stats. Identities = 29/110 (26%), Positives = 48/110 (43%), Gaps = 13/110 (11%) Query: 101 IQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 + +N G P+ + G GLNL G + ++ WW+ +E R + G Sbjct: 1016 VNSFNAGNTPIFLISLKAGGTGLNLT-GSDTVIHVDPWWN-----PSVENQASDRSHRIG 1069 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTIQD-------LLLNALKKETI 203 K +V V LI + TI+E +++ K + D L+N L +E I Sbjct: 1070 QKNSVQVIKLITKGTIEEKIMKLQNKKKKLIDNVLTSEGSLINTLSEEDI 1119 >gi|187779662|ref|ZP_02996135.1| hypothetical protein CLOSPO_03258 [Clostridium sporogenes ATCC 15579] gi|187773287|gb|EDU37089.1| hypothetical protein CLOSPO_03258 [Clostridium sporogenes ATCC 15579] Length = 1077 Score = 38.1 bits (87), Expect = 0.70, Method: Composition-based stats. Identities = 29/113 (25%), Positives = 55/113 (48%), Gaps = 16/113 (14%) Query: 101 IQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 ++++N GK + + G GLNL +I++ F WW+ +E R + G Sbjct: 965 VKDFNNGKGDIFLISLKAGGTGLNLT-SADIVIHFDPWWN-----PAVEDQASDRAHRIG 1018 Query: 161 FKRAVFVYYLIAQNTIDEL----------VLQRLRTKSTIQDLLLNALKKETI 203 K+ V V LIA+ TI+E ++ ++ K+ +++LL+ + +E I Sbjct: 1019 QKKTVEVIRLIAKGTIEEKIYKIQQKKKEIIDKVIDKNLGEEVLLSNMAEEEI 1071 >gi|32470671|ref|NP_863664.1| helicase [Rhodopirellula baltica SH 1] gi|32442816|emb|CAD71334.1| helicase [Rhodopirellula baltica SH 1] Length = 1176 Score = 38.1 bits (87), Expect = 0.71, Method: Composition-based stats. Identities = 24/82 (29%), Positives = 39/82 (47%), Gaps = 6/82 (7%) Query: 101 IQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 + + G+ L + G GLNL + ++ WW+ +E R + G Sbjct: 1065 VDAFQNGEGDLFLISLKAGGTGLNLT-AADYVLHLDPWWN-----PAVEDQATDRAHRIG 1118 Query: 161 FKRAVFVYYLIAQNTIDELVLQ 182 +RAV VY L+A+ TI+E +LQ Sbjct: 1119 QERAVTVYRLVAERTIEEQILQ 1140 >gi|292630874|sp|C7GQI8|RDH54_YEAS2 RecName: Full=DNA repair and recombination protein RDH54; AltName: Full=RAD homolog 54; AltName: Full=Recombination factor TID1; AltName: Full=Two hybrid interaction with DMC1 protein 1; Includes: RecName: Full=DNA topoisomerase; Includes: RecName: Full=Putative helicase gi|256271911|gb|EEU06936.1| Rdh54p [Saccharomyces cerevisiae JAY291] Length = 924 Score = 38.1 bits (87), Expect = 0.71, Method: Composition-based stats. Identities = 26/78 (33%), Positives = 38/78 (48%), Gaps = 6/78 (7%) Query: 118 SCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 S G GLNL G + L+ F W+ Q + RI + G K+ F+Y L+ ID Sbjct: 708 SGGVGLNL-VGASRLILFDNDWNPSVDLQAMSRI-----HRDGQKKPCFIYRLVTTGCID 761 Query: 178 ELVLQRLRTKSTIQDLLL 195 E +LQR K+++ L Sbjct: 762 EKILQRQLMKNSLSQKFL 779 >gi|164656581|ref|XP_001729418.1| hypothetical protein MGL_3453 [Malassezia globosa CBS 7966] gi|159103309|gb|EDP42204.1| hypothetical protein MGL_3453 [Malassezia globosa CBS 7966] Length = 1517 Score = 38.1 bits (87), Expect = 0.71, Method: Composition-based stats. Identities = 22/76 (28%), Positives = 40/76 (52%), Gaps = 6/76 (7%) Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 G G+NL + ++F+ W+ Q ++R + G + V VY LI + TIDE Sbjct: 1281 GLGINLT-AADTVIFYDHDWNPSNDSQAMDR-----AHRLGQTKQVTVYRLITKGTIDER 1334 Query: 180 VLQRLRTKSTIQDLLL 195 +++ R K +QD+++ Sbjct: 1335 IVKLARNKKEVQDIVV 1350 >gi|71004464|ref|XP_756898.1| hypothetical protein UM00751.1 [Ustilago maydis 521] gi|74704380|sp|Q4PGL2|INO80_USTMA RecName: Full=Putative DNA helicase INO80 gi|46095890|gb|EAK81123.1| hypothetical protein UM00751.1 [Ustilago maydis 521] Length = 1910 Score = 38.1 bits (87), Expect = 0.71, Method: Composition-based stats. Identities = 22/76 (28%), Positives = 40/76 (52%), Gaps = 6/76 (7%) Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 G G+NL + ++F+ W+ Q ++R + G + V VY LI + TIDE Sbjct: 1658 GLGINLT-AADTVIFYDHDWNPSNDSQAMDR-----AHRLGQTKQVTVYRLITKGTIDER 1711 Query: 180 VLQRLRTKSTIQDLLL 195 +++ R K +QD+++ Sbjct: 1712 IVRLARNKKEVQDIVV 1727 >gi|290878090|emb|CBK39149.1| Rdh54p [Saccharomyces cerevisiae EC1118] Length = 924 Score = 38.1 bits (87), Expect = 0.72, Method: Composition-based stats. Identities = 26/78 (33%), Positives = 38/78 (48%), Gaps = 6/78 (7%) Query: 118 SCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 S G GLNL G + L+ F W+ Q + RI + G K+ F+Y L+ ID Sbjct: 708 SGGVGLNL-VGASRLILFDNDWNPSVDLQAMSRI-----HRDGQKKPCFIYRLVTTGCID 761 Query: 178 ELVLQRLRTKSTIQDLLL 195 E +LQR K+++ L Sbjct: 762 EKILQRQLMKNSLSQKFL 779 >gi|257064055|ref|YP_003143727.1| DNA/RNA helicase, superfamily II, SNF2 family [Slackia heliotrinireducens DSM 20476] gi|256791708|gb|ACV22378.1| DNA/RNA helicase, superfamily II, SNF2 family [Slackia heliotrinireducens DSM 20476] Length = 907 Score = 38.1 bits (87), Expect = 0.72, Method: Compositional matrix adjust. Identities = 21/81 (25%), Positives = 40/81 (49%), Gaps = 6/81 (7%) Query: 101 IQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 + +N+ + P+L + G GLN+ ++ W + + Q +R + G Sbjct: 799 VDAFNKDETPVLLVSMRAGGVGLNMTGASTAIIADPFWHEAAQTQ------AYSRLWRLG 852 Query: 161 FKRAVFVYYLIAQNTIDELVL 181 +VFVY +IA+NTI++ +L Sbjct: 853 QDSSVFVYQIIAENTIEDRIL 873 >gi|321255221|ref|XP_003193350.1| SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 3 [Cryptococcus gattii WM276] gi|317459820|gb|ADV21563.1| SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 3, putative [Cryptococcus gattii WM276] Length = 899 Score = 38.1 bits (87), Expect = 0.73, Method: Compositional matrix adjust. Identities = 23/60 (38%), Positives = 30/60 (50%), Gaps = 6/60 (10%) Query: 122 GLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVL 181 GLNL N+ WW Q IE + R + G K+ V V+ LIA+NTI+ VL Sbjct: 806 GLNLTAASNVF-LCDPWW-----QSAIEAQAIDRAHRMGQKKIVRVFQLIAENTIESSVL 859 >gi|218282742|ref|ZP_03488939.1| hypothetical protein EUBIFOR_01525 [Eubacterium biforme DSM 3989] gi|218216387|gb|EEC89925.1| hypothetical protein EUBIFOR_01525 [Eubacterium biforme DSM 3989] Length = 1054 Score = 38.1 bits (87), Expect = 0.73, Method: Compositional matrix adjust. Identities = 22/76 (28%), Positives = 36/76 (47%), Gaps = 6/76 (7%) Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 G GLNL ++ F WW++ Q R + G + V VY L+ +NTI+E Sbjct: 963 GTGLNLT-KAQAVIHFDPWWNVSAQNQ-----ATDRAYRIGQTKNVLVYQLLMKNTIEEK 1016 Query: 180 VLQRLRTKSTIQDLLL 195 + + + K + DL + Sbjct: 1017 IYEMQKRKKEMSDLFV 1032 >gi|260818894|ref|XP_002604617.1| hypothetical protein BRAFLDRAFT_126777 [Branchiostoma floridae] gi|229289945|gb|EEN60628.1| hypothetical protein BRAFLDRAFT_126777 [Branchiostoma floridae] Length = 1277 Score = 38.1 bits (87), Expect = 0.73, Method: Compositional matrix adjust. Identities = 24/78 (30%), Positives = 39/78 (50%), Gaps = 6/78 (7%) Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 G GLNL N ++ + LW++ + Q +R + G + VFVY I++NT +E Sbjct: 1186 GVGLNLT-AANHVIHYDLWFNPAKENQATDR-----AFRIGQTKTVFVYRFISENTFEEK 1239 Query: 180 VLQRLRTKSTIQDLLLNA 197 + L K + DL + A Sbjct: 1240 INVMLEKKKDLSDLSVQA 1257 >gi|84998372|ref|XP_953907.1| SNF2-family protein (chromodomain-helicase-DNA-binding protein 1 ) [Theileria annulata] gi|65304905|emb|CAI73230.1| SNF2-family protein (chromodomain-helicase-DNA-binding protein 1 homologue), putative [Theileria annulata] Length = 1816 Score = 38.1 bits (87), Expect = 0.73, Method: Compositional matrix adjust. Identities = 20/81 (24%), Positives = 41/81 (50%), Gaps = 6/81 (7%) Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 G G+NL ++++ S W + Q R + G + V +Y L+ +++I++ Sbjct: 1195 GLGINLTSADTVIIYDSDWNPQNDLQ------AEARAHRIGQTKTVQIYRLVTKDSIEQT 1248 Query: 180 VLQRLRTKSTIQDLLLNALKK 200 +L+R +TK + L++ L K Sbjct: 1249 ILERAKTKMVLDALVVQGLNK 1269 >gi|19074332|ref|NP_585838.1| BELONGS TO THE SNF2/RAD54 HELICASE FAMILY [Encephalitozoon cuniculi GB-M1] gi|19068974|emb|CAD25442.1| BELONGS TO THE SNF2/RAD54 HELICASE FAMILY [Encephalitozoon cuniculi GB-M1] Length = 556 Score = 38.1 bits (87), Expect = 0.73, Method: Compositional matrix adjust. Identities = 26/78 (33%), Positives = 40/78 (51%), Gaps = 6/78 (7%) Query: 117 ASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTI 176 +C GL L G +VF L+W+ Q +RI + G K +V + YL+A+ TI Sbjct: 454 TACSTGLTLT-AGRAVVFAELYWNPGVLLQAEDRI-----HRIGQKSSVDIIYLVAKGTI 507 Query: 177 DELVLQRLRTKSTIQDLL 194 DE V +L +K + + L Sbjct: 508 DEYVWPKLLSKLNVLESL 525 >gi|66827655|ref|XP_647182.1| myb domain-containing protein [Dictyostelium discoideum AX4] gi|60475337|gb|EAL73272.1| myb domain-containing protein [Dictyostelium discoideum AX4] Length = 3069 Score = 38.1 bits (87), Expect = 0.73, Method: Composition-based stats. Identities = 31/108 (28%), Positives = 52/108 (48%), Gaps = 13/108 (12%) Query: 94 LDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLE---EHQQMIE 149 +DK + +N + KI L S G GLNL G + ++F+ W+ + Q Sbjct: 1431 IDKRQVLTERFNTDPKIFLFILSTRSGGLGLNLT-GADTVIFYDTDWNPSMDAQAQDRCH 1489 Query: 150 RIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 RIG TR+ V +Y I Q+TI+E +L++ K + +++ A Sbjct: 1490 RIGQTRE--------VNIYRFITQHTIEENILKKSNQKRQLDKMVIKA 1529 >gi|224111230|ref|XP_002315787.1| chromatin remodeling complex subunit [Populus trichocarpa] gi|222864827|gb|EEF01958.1| chromatin remodeling complex subunit [Populus trichocarpa] Length = 1132 Score = 38.1 bits (87), Expect = 0.73, Method: Compositional matrix adjust. Identities = 21/78 (26%), Positives = 41/78 (52%), Gaps = 6/78 (7%) Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 G GLNLQ +++F S W +++ R + G K+ V V+ L++ +++E+ Sbjct: 808 GLGLNLQTADTVIIFDSDW------NPQMDQQAEDRAHRIGQKKEVRVFVLVSVGSVEEV 861 Query: 180 VLQRLRTKSTIQDLLLNA 197 +L+R + K I ++ A Sbjct: 862 ILERAKQKKGIDAKVIQA 879 >gi|329954230|ref|ZP_08295324.1| helicase protein [Bacteroides clarus YIT 12056] gi|328527936|gb|EGF54922.1| helicase protein [Bacteroides clarus YIT 12056] Length = 562 Score = 38.1 bits (87), Expect = 0.74, Method: Compositional matrix adjust. Identities = 32/129 (24%), Positives = 53/129 (41%), Gaps = 13/129 (10%) Query: 71 IIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEW-------NEGKIPLLFAHPASCGHGL 123 +IV + + L+K FPQ T+ + I++ N L+ + S G GL Sbjct: 415 LIVFAYLKEVVMELKKMFPQAVTVTGEDNAIRKQMSVDAFQNNPDCTLIILNYKSGGTGL 474 Query: 124 NLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQR 183 L + F W + +Q +R + G K V YY + +NTIDE + Sbjct: 475 TLTASSRV-AFIEFPWTFSDCEQAEDR-----AHRNGQKNNVNCYYFLGKNTIDEYMYDV 528 Query: 184 LRTKSTIQD 192 ++ K I + Sbjct: 529 IQRKKGIAN 537 >gi|261334500|emb|CBH17494.1| DNA repair and recombination protein RAD54,putative [Trypanosoma brucei gambiense DAL972] Length = 1037 Score = 38.1 bits (87), Expect = 0.74, Method: Composition-based stats. Identities = 31/98 (31%), Positives = 48/98 (48%), Gaps = 10/98 (10%) Query: 105 NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA 164 N +I L + A G GLNL G N L+ F W+ Q + R+ + G K+ Sbjct: 767 NSQEIVFLLSSKAG-GVGLNL-IGANRLILFDPDWNPANDAQAMGRVW-----RDGQKKR 819 Query: 165 VFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKET 202 VF+Y L++ +I+E + QR +K Q L N + +T Sbjct: 820 VFIYRLLSTGSIEEKIYQRQVSK---QGLSANVVDMQT 854 >gi|241950892|ref|XP_002418168.1| ATP-dependent helicase, putative; SWI/SNF chromatin remodelling complex protein, putative; SWI/SNF complex component, putative; transcription regulatory protein, putative [Candida dubliniensis CD36] gi|223641507|emb|CAX43468.1| ATP-dependent helicase, putative [Candida dubliniensis CD36] Length = 1663 Score = 38.1 bits (87), Expect = 0.74, Method: Compositional matrix adjust. Identities = 24/82 (29%), Positives = 42/82 (51%), Gaps = 6/82 (7%) Query: 118 SCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 + G GLNLQ +++F + W HQ + + R + G K V + LI +N+++ Sbjct: 1153 AGGLGLNLQTADTVIIFDTDW---NPHQDLQAQ---DRAHRIGQKNEVRILRLITENSVE 1206 Query: 178 ELVLQRLRTKSTIQDLLLNALK 199 E++L+R K I ++ A K Sbjct: 1207 EMILERAHKKLEIDGKVIQAGK 1228 >gi|50308261|ref|XP_454131.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140] gi|49643266|emb|CAG99218.1| KLLA0E04159p [Kluyveromyces lactis] Length = 826 Score = 38.1 bits (87), Expect = 0.74, Method: Compositional matrix adjust. Identities = 25/99 (25%), Positives = 44/99 (44%), Gaps = 11/99 (11%) Query: 107 GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVF 166 K L + G G+NL ++++F S W ++ + R + G + V Sbjct: 639 SKANLFLLSTRAAGLGINLTAADSVIIFDSDW------NPQVDLQAMDRAHRIGQTKPVI 692 Query: 167 VYYLIAQNTIDELVLQRLRTKSTIQDLLL-----NALKK 200 VY L NTI+ +++ R K ++ L++ N LKK Sbjct: 693 VYRLYCDNTIENVIMTRAVNKRKLEKLVIQMGKFNTLKK 731 >gi|71755407|ref|XP_828618.1| DNA repair/recombination protein RAD54 [Trypanosoma brucei TREU927] gi|70834004|gb|EAN79506.1| DNA repair and recombination protein RAD54, putative [Trypanosoma brucei] Length = 1037 Score = 38.1 bits (87), Expect = 0.74, Method: Composition-based stats. Identities = 31/98 (31%), Positives = 48/98 (48%), Gaps = 10/98 (10%) Query: 105 NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA 164 N +I L + A G GLNL G N L+ F W+ Q + R+ + G K+ Sbjct: 767 NSQEIVFLLSSKAG-GVGLNL-IGANRLILFDPDWNPANDAQAMGRVW-----RDGQKKR 819 Query: 165 VFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKET 202 VF+Y L++ +I+E + QR +K Q L N + +T Sbjct: 820 VFIYRLLSTGSIEEKIYQRQVSK---QGLSANVVDMQT 854 >gi|321265706|ref|XP_003197569.1| helicase domain DNA excision repair protein (Rad26L) [Cryptococcus gattii WM276] gi|317464049|gb|ADV25782.1| Helicase domain DNA excision repair protein (Rad26L), putative [Cryptococcus gattii WM276] Length = 1016 Score = 38.1 bits (87), Expect = 0.74, Method: Compositional matrix adjust. Identities = 32/128 (25%), Positives = 57/128 (44%), Gaps = 19/128 (14%) Query: 56 IKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAH 115 ++ L++I + +P + + F++ L A + +D+ Q+ + +L + Sbjct: 644 VRLLKIISRFISTSPSLSGFEFDA-LTGEASAVERQEMIDR----FQDREKDHFIMLIST 698 Query: 116 PASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNT 175 A G GLNL +++F W + R + G KR V VY LI Q T Sbjct: 699 RAG-GVGLNLTAANKVVIFDPSWT-------------MDRAFRIGQKRTVEVYRLIGQGT 744 Query: 176 IDELVLQR 183 I+EL+ +R Sbjct: 745 IEELIYER 752 >gi|242767903|ref|XP_002341462.1| chromodomain helicase (Chd1), putative [Talaromyces stipitatus ATCC 10500] gi|218724658|gb|EED24075.1| chromodomain helicase (Chd1), putative [Talaromyces stipitatus ATCC 10500] Length = 1499 Score = 38.1 bits (87), Expect = 0.74, Method: Composition-based stats. Identities = 23/72 (31%), Positives = 38/72 (52%), Gaps = 6/72 (8%) Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 G G+NL +++F S W + Q M R + G + V VY L++++TI+E Sbjct: 834 GLGINLMTADTVILFDSDWNPQADLQAM------ARAHRIGQTKPVSVYRLVSKDTIEEE 887 Query: 180 VLQRLRTKSTIQ 191 VL+R R K ++ Sbjct: 888 VLERARNKLMLE 899 >gi|330443433|ref|NP_009629.4| Rdh54p [Saccharomyces cerevisiae S288c] gi|329136720|tpg|DAA07193.2| TPA: Rdh54p [Saccharomyces cerevisiae S288c] Length = 958 Score = 38.1 bits (87), Expect = 0.75, Method: Composition-based stats. Identities = 26/78 (33%), Positives = 38/78 (48%), Gaps = 6/78 (7%) Query: 118 SCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 S G GLNL G + L+ F W+ Q + RI + G K+ F+Y L+ ID Sbjct: 742 SGGVGLNL-VGASRLILFDNDWNPSVDLQAMSRI-----HRDGQKKPCFIYRLVTTGCID 795 Query: 178 ELVLQRLRTKSTIQDLLL 195 E +LQR K+++ L Sbjct: 796 EKILQRQLMKNSLSQKFL 813 >gi|153006894|ref|YP_001381219.1| non-specific serine/threonine protein kinase [Anaeromyxobacter sp. Fw109-5] gi|152030467|gb|ABS28235.1| Non-specific serine/threonine protein kinase [Anaeromyxobacter sp. Fw109-5] Length = 931 Score = 38.1 bits (87), Expect = 0.76, Method: Composition-based stats. Identities = 25/87 (28%), Positives = 39/87 (44%), Gaps = 6/87 (6%) Query: 109 IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVY 168 +P L + G GLNL ++ V F WW+ +E R + G KR V V+ Sbjct: 820 LPFLVLSLKAGGTGLNLTAASHV-VHFDRWWN-----PAVENQATDRAFRIGQKRPVLVH 873 Query: 169 YLIAQNTIDELVLQRLRTKSTIQDLLL 195 L+ + T++E + L K + LL Sbjct: 874 KLVCRGTVEERIDSMLEDKRRLSQELL 900 >gi|159131149|gb|EDP56262.1| chromodomain helicase (Chd1), putative [Aspergillus fumigatus A1163] Length = 1523 Score = 38.1 bits (87), Expect = 0.76, Method: Composition-based stats. Identities = 22/68 (32%), Positives = 36/68 (52%), Gaps = 6/68 (8%) Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 G G+NL +++F S W + Q M R + G R V VY L++++T++E Sbjct: 839 GLGINLMTADTVILFDSDWNPQADLQAM------ARAHRIGQTRPVSVYRLVSKDTVEEE 892 Query: 180 VLQRLRTK 187 V++R R K Sbjct: 893 VIERARNK 900 >gi|119495934|ref|XP_001264742.1| chromodomain helicase (Chd1), putative [Neosartorya fischeri NRRL 181] gi|119412904|gb|EAW22845.1| chromodomain helicase (Chd1), putative [Neosartorya fischeri NRRL 181] Length = 1523 Score = 38.1 bits (87), Expect = 0.76, Method: Composition-based stats. Identities = 22/68 (32%), Positives = 36/68 (52%), Gaps = 6/68 (8%) Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 G G+NL +++F S W + Q M R + G R V VY L++++T++E Sbjct: 839 GLGINLMTADTVILFDSDWNPQADLQAM------ARAHRIGQTRPVSVYRLVSKDTVEEE 892 Query: 180 VLQRLRTK 187 V++R R K Sbjct: 893 VIERARNK 900 >gi|315499178|ref|YP_004087982.1| snf2-related protein [Asticcacaulis excentricus CB 48] gi|315417190|gb|ADU13831.1| SNF2-related protein [Asticcacaulis excentricus CB 48] Length = 1107 Score = 38.1 bits (87), Expect = 0.77, Method: Composition-based stats. Identities = 32/117 (27%), Positives = 52/117 (44%), Gaps = 16/117 (13%) Query: 71 IIVAYHFNSDL----ARLQKA-----FPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGH 121 +I+ F S L ARL KA G+T ++ + + G P+ + G Sbjct: 961 LIIFSQFTSMLDLIAARLDKAGLGYGILTGKTQNRKK-EVDAFQSGDNPIFLISLKAGGT 1019 Query: 122 GLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDE 178 GLNL + ++ + WW+ Q I+R + G + VFVY L A+ TI++ Sbjct: 1020 GLNLT-SADTVILYDPWWNPAVEAQAIDR-----AYRIGQDKPVFVYRLCAEGTIED 1070 >gi|73977923|ref|XP_532592.2| PREDICTED: similar to DNA repair and recombination protein RAD54-like (RAD54 homolog) (hRAD54) (hHR54) [Canis familiaris] Length = 907 Score = 38.1 bits (87), Expect = 0.77, Method: Composition-based stats. Identities = 23/77 (29%), Positives = 39/77 (50%), Gaps = 6/77 (7%) Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 G GLNL G N LV F W+ +Q + R+ + G K+ ++Y L++ TI+E Sbjct: 737 GCGLNL-IGANRLVMFDPDWNPANDEQAMARVW-----RDGQKKTCYIYRLLSAGTIEEK 790 Query: 180 VLQRLRTKSTIQDLLLN 196 + QR K + +++ Sbjct: 791 IFQRQSHKKALSSCVVD 807 >gi|28211487|ref|NP_782431.1| SWF/SNF family helicase [Clostridium tetani E88] gi|28203928|gb|AAO36368.1| SWF/SNF family helicase [Clostridium tetani E88] Length = 1093 Score = 38.1 bits (87), Expect = 0.77, Method: Composition-based stats. Identities = 29/120 (24%), Positives = 58/120 (48%), Gaps = 11/120 (9%) Query: 80 DLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWW 139 D + L + P + ++ ++++N+GK + + G GLNL ++++ F WW Sbjct: 964 DFSYLDGSIPSEKRMN----MVRDFNDGKNSVFLISLKAGGTGLNLT-SADVVIHFDPWW 1018 Query: 140 DLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDE-LVLQRLRTKSTIQDLLLNAL 198 + +E R + G + V V +IA+ TI+E ++L + K I +L+ + L Sbjct: 1019 N-----PAVEDQATDRAHRIGQQNVVEVIKIIAKGTIEEKIILLQEEKKKLISELMGDEL 1073 >gi|70995269|ref|XP_752395.1| chromodomain helicase (Chd1) [Aspergillus fumigatus Af293] gi|66850030|gb|EAL90357.1| chromodomain helicase (Chd1), putative [Aspergillus fumigatus Af293] Length = 1523 Score = 38.1 bits (87), Expect = 0.77, Method: Composition-based stats. Identities = 22/68 (32%), Positives = 36/68 (52%), Gaps = 6/68 (8%) Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 G G+NL +++F S W + Q M R + G R V VY L++++T++E Sbjct: 839 GLGINLMTADTVILFDSDWNPQADLQAM------ARAHRIGQTRPVSVYRLVSKDTVEEE 892 Query: 180 VLQRLRTK 187 V++R R K Sbjct: 893 VIERARNK 900 >gi|291455433|ref|ZP_06594823.1| SNF2/RAD54 family helicase [Streptomyces albus J1074] gi|291358382|gb|EFE85284.1| SNF2/RAD54 family helicase [Streptomyces albus J1074] Length = 958 Score = 38.1 bits (87), Expect = 0.78, Method: Composition-based stats. Identities = 22/97 (22%), Positives = 45/97 (46%), Gaps = 6/97 (6%) Query: 101 IQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 ++ + +G++P+ + G GLNL ++ V WW+ +E R + G Sbjct: 844 VRRFQDGEVPVFLLSLKAAGTGLNLTRAEHV-VHVDRWWN-----PAVEAQATDRAYRIG 897 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 R V V+ ++ + TI++ + + L K + D +L Sbjct: 898 QTRPVQVHRIVTEGTIEDRIAELLVRKQALADAVLTG 934 >gi|293401290|ref|ZP_06645434.1| HepA/SNF2 family protein [Erysipelotrichaceae bacterium 5_2_54FAA] gi|291305416|gb|EFE46661.1| HepA/SNF2 family protein [Erysipelotrichaceae bacterium 5_2_54FAA] Length = 1075 Score = 38.1 bits (87), Expect = 0.78, Method: Compositional matrix adjust. Identities = 37/154 (24%), Positives = 64/154 (41%), Gaps = 20/154 (12%) Query: 55 KIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAFPQGRTLD------KDPCT-----I 101 KI A IE +A+ +++ F S L+ ++K Q R +D P + Sbjct: 910 KINACMEFIENCRASGKKVLLFSQFTSLLSLIEKELKQ-REIDYYLLKGSTPKVQRQQYV 968 Query: 102 QEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGF 161 +N P+ + G GLNL +++ F WW++ Q R + G Sbjct: 969 NAFNVDATPVFLISLKAGGTGLNLT-SAEVVIHFDPWWNVSAQNQ-----ATDRAYRIGQ 1022 Query: 162 KRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 V V LIA++TI+E ++ K + D ++ Sbjct: 1023 HNNVQVVKLIAKDTIEEKIMHLQELKQDLSDSII 1056 >gi|239983620|ref|ZP_04706144.1| SNF2/RAD54 family helicase [Streptomyces albus J1074] Length = 956 Score = 38.1 bits (87), Expect = 0.78, Method: Composition-based stats. Identities = 22/97 (22%), Positives = 45/97 (46%), Gaps = 6/97 (6%) Query: 101 IQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 ++ + +G++P+ + G GLNL ++ V WW+ +E R + G Sbjct: 842 VRRFQDGEVPVFLLSLKAAGTGLNLTRAEHV-VHVDRWWN-----PAVEAQATDRAYRIG 895 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 R V V+ ++ + TI++ + + L K + D +L Sbjct: 896 QTRPVQVHRIVTEGTIEDRIAELLVRKQALADAVLTG 932 >gi|300709133|ref|XP_002996734.1| hypothetical protein NCER_100152 [Nosema ceranae BRL01] gi|239606056|gb|EEQ83063.1| hypothetical protein NCER_100152 [Nosema ceranae BRL01] Length = 1243 Score = 38.1 bits (87), Expect = 0.78, Method: Composition-based stats. Identities = 25/79 (31%), Positives = 42/79 (53%), Gaps = 6/79 (7%) Query: 103 EWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFK 162 ++N G IP+LF G GLNL G + ++F+ W+ Q ++ R + G K Sbjct: 1136 DFNTGNIPILFLTTHIGGLGLNLT-GADTVIFYEHDWNPFNDLQAMD-----RAHRIGQK 1189 Query: 163 RAVFVYYLIAQNTIDELVL 181 V V+ LI +++I+E V+ Sbjct: 1190 NTVNVFRLITKDSIEEKVM 1208 >gi|157870081|ref|XP_001683591.1| DNA repair and recombination protein RAD54 [Leishmania major strain Friedlin] gi|68126657|emb|CAJ04466.1| putative DNA repair and recombination protein RAD54 [Leishmania major strain Friedlin] Length = 1127 Score = 38.1 bits (87), Expect = 0.78, Method: Composition-based stats. Identities = 24/68 (35%), Positives = 36/68 (52%), Gaps = 6/68 (8%) Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 G GLNL G N L+ F W+ Q + R+ + G K+ VF+Y L++ TI+E Sbjct: 874 GVGLNL-IGANRLILFDPDWNPANDAQAMGRVW-----RDGQKKCVFIYRLLSTGTIEEK 927 Query: 180 VLQRLRTK 187 + QR +K Sbjct: 928 IYQRQVSK 935 >gi|46190976|ref|ZP_00120784.2| COG0553: Superfamily II DNA/RNA helicases, SNF2 family [Bifidobacterium longum DJO10A] Length = 1062 Score = 38.1 bits (87), Expect = 0.78, Method: Compositional matrix adjust. Identities = 23/90 (25%), Positives = 42/90 (46%), Gaps = 6/90 (6%) Query: 101 IQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 + ++N P + GLNL G ++++ WW+ Q +R + G Sbjct: 938 VDQFNADDTPAFLISLKAGNTGLNLT-GASVVIHADPWWNAAAQDQATDR-----AHRIG 991 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 V VY ++A++TI+E +L+ TKS + Sbjct: 992 QTEDVNVYQVVAKDTIEERILELQHTKSEL 1021 >gi|325841031|ref|ZP_08167240.1| SNF2 family N-terminal domain protein [Turicibacter sp. HGF1] gi|325490097|gb|EGC92440.1| SNF2 family N-terminal domain protein [Turicibacter sp. HGF1] Length = 1080 Score = 38.1 bits (87), Expect = 0.78, Method: Compositional matrix adjust. Identities = 22/89 (24%), Positives = 44/89 (49%), Gaps = 7/89 (7%) Query: 92 RTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERI 151 +T D+ T +++N+ + + G GLNL G ++++ + WW++ Q Sbjct: 959 KTSDRLALT-EQFNQDDTKVFLISLKAGGTGLNLT-GADVVIHYDPWWNMSAQNQ----- 1011 Query: 152 GVTRQRQAGFKRAVFVYYLIAQNTIDELV 180 R + G + V V+ L+ +NTI+E + Sbjct: 1012 ATDRAHRLGQDKTVQVFKLMVKNTIEERI 1040 >gi|309363526|emb|CAP26346.2| hypothetical protein CBG_06016 [Caenorhabditis briggsae AF16] Length = 1380 Score = 38.1 bits (87), Expect = 0.78, Method: Compositional matrix adjust. Identities = 27/89 (30%), Positives = 41/89 (46%), Gaps = 6/89 (6%) Query: 111 LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYL 170 L + G GLNLQ +++F S W HQ M R + G K+ V V L Sbjct: 963 LFMLSTRAGGLGLNLQTADTVIIFDSDW---NPHQDM---QAQDRAHRIGQKKEVRVLRL 1016 Query: 171 IAQNTIDELVLQRLRTKSTIQDLLLNALK 199 I N+++E +L R K + + ++ A K Sbjct: 1017 ITANSVEEKILAAARYKLNVDEKVIQAGK 1045 >gi|47208011|emb|CAF91219.1| unnamed protein product [Tetraodon nigroviridis] Length = 454 Score = 38.1 bits (87), Expect = 0.78, Method: Compositional matrix adjust. Identities = 26/88 (29%), Positives = 42/88 (47%), Gaps = 12/88 (13%) Query: 111 LLFAHPASCGHGLNLQYGGNILVFFSLW---WDLEEHQQMIERIGVTRQRQAGFKRAVFV 167 L + G G+NL +++F S W DL+ Q RIG T+ V V Sbjct: 306 LFLLSTRAGGLGINLTAADTVIIFDSDWNPQADLQA-QDRCHRIGQTK--------PVVV 356 Query: 168 YYLIAQNTIDELVLQRLRTKSTIQDLLL 195 Y L+ NTID+ +L+R K ++ +++ Sbjct: 357 YRLVTANTIDQKILERASNKRKLEQMVI 384 >gi|260942759|ref|XP_002615678.1| hypothetical protein CLUG_04560 [Clavispora lusitaniae ATCC 42720] gi|238850968|gb|EEQ40432.1| hypothetical protein CLUG_04560 [Clavispora lusitaniae ATCC 42720] Length = 1563 Score = 38.1 bits (87), Expect = 0.79, Method: Compositional matrix adjust. Identities = 26/82 (31%), Positives = 42/82 (51%), Gaps = 6/82 (7%) Query: 118 SCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 + G GLNLQ +++F S W HQ + + R + G K V + LI +++I+ Sbjct: 1104 AGGLGLNLQTADTVIIFDSDW---NPHQDLQAQ---DRAHRIGQKNEVRILRLITEDSIE 1157 Query: 178 ELVLQRLRTKSTIQDLLLNALK 199 E+VL+R K I ++ A K Sbjct: 1158 EMVLERAVAKLEIDGKVIQAGK 1179 >gi|293375830|ref|ZP_06622099.1| SNF2 family N-terminal domain protein [Turicibacter sanguinis PC909] gi|292645538|gb|EFF63579.1| SNF2 family N-terminal domain protein [Turicibacter sanguinis PC909] Length = 1080 Score = 38.1 bits (87), Expect = 0.80, Method: Compositional matrix adjust. Identities = 22/89 (24%), Positives = 44/89 (49%), Gaps = 7/89 (7%) Query: 92 RTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERI 151 +T D+ T +++N+ + + G GLNL G ++++ + WW++ Q Sbjct: 959 KTSDRLALT-EQFNQDDTKVFLISLKAGGTGLNLT-GADVVIHYDPWWNMSAQNQ----- 1011 Query: 152 GVTRQRQAGFKRAVFVYYLIAQNTIDELV 180 R + G + V V+ L+ +NTI+E + Sbjct: 1012 ATDRAHRLGQDKTVQVFKLMVKNTIEERI 1040 >gi|291221939|ref|XP_002730974.1| PREDICTED: helicase, lymphoid specific-like [Saccoglossus kowalevskii] Length = 905 Score = 38.1 bits (87), Expect = 0.80, Method: Compositional matrix adjust. Identities = 24/96 (25%), Positives = 44/96 (45%), Gaps = 7/96 (7%) Query: 101 IQEWNEGKIPLLFAHPASCGH-GLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQA 159 I +N K +F G GLNL ++++ S W + Q R + Sbjct: 723 ISTFNNDKDAFIFLLSTRAGGLGLNLASADTVIIYDSDWNPQSDLQ------AQDRCHRI 776 Query: 160 GFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 G + V V+ L+ QNTID+ +++R K ++ +++ Sbjct: 777 GQNKPVTVFRLVTQNTIDQKIVERASAKRKLEKMVI 812 >gi|154270293|ref|XP_001536002.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1] gi|150410016|gb|EDN05404.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1] Length = 884 Score = 38.1 bits (87), Expect = 0.80, Method: Compositional matrix adjust. Identities = 23/88 (26%), Positives = 41/88 (46%), Gaps = 6/88 (6%) Query: 105 NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA 164 N+ +L A C GLNL N ++ WW Q ++R+ + G KR Sbjct: 780 NDSNCTVLLASLNVCSVGLNL-VAANQVILADSWWAPAIEDQAVDRV-----YRLGQKRP 833 Query: 165 VFVYYLIAQNTIDELVLQRLRTKSTIQD 192 ++ L+ +N+I++ VL + + K +D Sbjct: 834 TTIWRLVMENSIEDRVLDKQKEKHRKRD 861 >gi|92116907|ref|YP_576636.1| helicase-like [Nitrobacter hamburgensis X14] gi|91799801|gb|ABE62176.1| helicase-like protein [Nitrobacter hamburgensis X14] Length = 928 Score = 38.1 bits (87), Expect = 0.80, Method: Compositional matrix adjust. Identities = 29/82 (35%), Positives = 41/82 (50%), Gaps = 2/82 (2%) Query: 106 EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 E I L+ A A+C GLNLQ G L+ L W+ +Q I RI QR+ Sbjct: 759 ERTIRLIVATDAAC-EGLNLQTLGT-LINVDLPWNPSRLEQRIGRIKRFGQRRDRVDMLN 816 Query: 166 FVYYLIAQNTIDELVLQRLRTK 187 +Y+ AQ T+DE V +L ++ Sbjct: 817 LLYHGSAQPTVDEKVYAKLSSR 838 >gi|195119131|ref|XP_002004085.1| GI19521 [Drosophila mojavensis] gi|193914660|gb|EDW13527.1| GI19521 [Drosophila mojavensis] Length = 1865 Score = 38.1 bits (87), Expect = 0.81, Method: Compositional matrix adjust. Identities = 24/68 (35%), Positives = 34/68 (50%), Gaps = 6/68 (8%) Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 G G+NL G N ++ W+ QQ I RI + G K+ ++Y LIA T++E Sbjct: 315 GQGINLT-GANRVIILDTSWNPSNDQQNIFRI-----FRLGQKKNCYIYRLIAMGTMEEK 368 Query: 180 VLQRLRTK 187 V R TK Sbjct: 369 VYSRSVTK 376 >gi|66821527|ref|XP_644229.1| SNF2-related domain-containing protein [Dictyostelium discoideum AX4] gi|60472422|gb|EAL70375.1| SNF2-related domain-containing protein [Dictyostelium discoideum AX4] Length = 1400 Score = 38.1 bits (87), Expect = 0.81, Method: Compositional matrix adjust. Identities = 25/81 (30%), Positives = 39/81 (48%), Gaps = 22/81 (27%) Query: 113 FAHPASC----------GHGLNLQYGGNILVFFSLWWD---LEEHQQMIERIGVTRQRQA 159 F + ASC G GL L N++VF L+W L + + I RIG T+ Sbjct: 1064 FQNNASCKVALLSITAAGTGLTLT-ASNLVVFVELYWTPGVLRQAEDRIHRIGQTK---- 1118 Query: 160 GFKRAVFVYYLIAQNTIDELV 180 +++YLI +NT+D+ + Sbjct: 1119 ----TCYIHYLIGKNTLDDRI 1135 >gi|328862601|gb|EGG11702.1| hypothetical protein MELLADRAFT_115234 [Melampsora larici-populina 98AG31] Length = 1138 Score = 38.1 bits (87), Expect = 0.82, Method: Compositional matrix adjust. Identities = 27/97 (27%), Positives = 48/97 (49%), Gaps = 8/97 (8%) Query: 101 IQEWN-EGKIPLLFAHPASCGH-GLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQ 158 I E+N EG +F G G+NL +I+V F W+ + Q ++R + Sbjct: 574 IDEYNKEGSSKFIFLLTTRAGGLGINLTTA-DIVVLFDSDWNPQADLQAMDRA-----HR 627 Query: 159 AGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 G K+ V+V+ + +N ++E VL+R K + L++ Sbjct: 628 IGQKKQVYVFRFVTENAVEEKVLERAAQKLRLDQLVI 664 >gi|254586199|ref|XP_002498667.1| ZYRO0G15796p [Zygosaccharomyces rouxii] gi|238941561|emb|CAR29734.1| ZYRO0G15796p [Zygosaccharomyces rouxii] Length = 1651 Score = 38.1 bits (87), Expect = 0.82, Method: Compositional matrix adjust. Identities = 24/82 (29%), Positives = 42/82 (51%), Gaps = 6/82 (7%) Query: 118 SCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 + G GLNLQ +++F + W HQ + + R + G K V + LI QN+++ Sbjct: 1116 AGGLGLNLQTADTVIIFDTDW---NPHQDLQAQ---DRAHRIGQKNEVKILRLITQNSVE 1169 Query: 178 ELVLQRLRTKSTIQDLLLNALK 199 E++L++ K I ++ A K Sbjct: 1170 EVILEKAHKKLDIDGKVIQAGK 1191 >gi|301768186|ref|XP_002919520.1| PREDICTED: DNA repair and recombination protein RAD54-like [Ailuropoda melanoleuca] Length = 838 Score = 37.7 bits (86), Expect = 0.83, Method: Composition-based stats. Identities = 23/77 (29%), Positives = 39/77 (50%), Gaps = 6/77 (7%) Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 G GLNL G N LV F W+ +Q + R+ + G K+ ++Y L++ TI+E Sbjct: 668 GCGLNL-IGANRLVMFDPDWNPANDEQAMARVW-----RDGQKKTCYIYRLLSAGTIEEK 721 Query: 180 VLQRLRTKSTIQDLLLN 196 + QR K + +++ Sbjct: 722 IFQRQSHKKALSSCVVD 738 >gi|114556131|ref|XP_513146.2| PREDICTED: RAD54-like protein [Pan troglodytes] Length = 901 Score = 37.7 bits (86), Expect = 0.83, Method: Composition-based stats. Identities = 23/77 (29%), Positives = 39/77 (50%), Gaps = 6/77 (7%) Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 G GLNL G N LV F W+ +Q + R+ + G K+ ++Y L++ TI+E Sbjct: 731 GCGLNL-IGANRLVMFDPDWNPANDEQAMARVW-----RDGQKKTCYIYRLLSAGTIEEK 784 Query: 180 VLQRLRTKSTIQDLLLN 196 + QR K + +++ Sbjct: 785 IFQRQSHKKALSSCVVD 801 >gi|268536304|ref|XP_002633287.1| Hypothetical protein CBG06016 [Caenorhabditis briggsae] Length = 1369 Score = 37.7 bits (86), Expect = 0.83, Method: Compositional matrix adjust. Identities = 27/89 (30%), Positives = 41/89 (46%), Gaps = 6/89 (6%) Query: 111 LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYL 170 L + G GLNLQ +++F S W HQ M R + G K+ V V L Sbjct: 956 LFMLSTRAGGLGLNLQTADTVIIFDSDW---NPHQDM---QAQDRAHRIGQKKEVRVLRL 1009 Query: 171 IAQNTIDELVLQRLRTKSTIQDLLLNALK 199 I N+++E +L R K + + ++ A K Sbjct: 1010 ITANSVEEKILAAARYKLNVDEKVIQAGK 1038 >gi|324526853|gb|ADY48722.1| Transcription activator BRG1 [Ascaris suum] Length = 245 Score = 37.7 bits (86), Expect = 0.84, Method: Compositional matrix adjust. Identities = 26/82 (31%), Positives = 39/82 (47%), Gaps = 6/82 (7%) Query: 118 SCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 + G GLNLQ +++F S W HQ M R + G R V V L+ N+I+ Sbjct: 32 AGGLGLNLQTADTVIIFDSDW---NPHQDM---QAQDRAHRIGQSREVRVLRLVTVNSIE 85 Query: 178 ELVLQRLRTKSTIQDLLLNALK 199 E +L R K + + ++ A K Sbjct: 86 EKILAAARYKLNVDEKVIQAGK 107 >gi|213402947|ref|XP_002172246.1| ATP-dependent DNA helicase Rdh54 [Schizosaccharomyces japonicus yFS275] gi|212000293|gb|EEB05953.1| ATP-dependent DNA helicase Rdh54 [Schizosaccharomyces japonicus yFS275] Length = 749 Score = 37.7 bits (86), Expect = 0.84, Method: Compositional matrix adjust. Identities = 24/80 (30%), Positives = 40/80 (50%), Gaps = 6/80 (7%) Query: 118 SCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 S G GLNL G N L+ F W+ Q + RI + G R+V +Y L++ +D Sbjct: 533 SGGAGLNL-VGANRLILFEPSWNPAYDLQALGRI-----YRYGQNRSVLIYTLLSTGMLD 586 Query: 178 ELVLQRLRTKSTIQDLLLNA 197 E + R TK+ + + +++ Sbjct: 587 EQIYIRQHTKTGLSNAFMDS 606 >gi|156086846|ref|XP_001610830.1| chromo-helicase DNA-binding protein [Babesia bovis T2Bo] gi|154798083|gb|EDO07262.1| chromo-helicase DNA-binding protein, putative [Babesia bovis] Length = 1729 Score = 37.7 bits (86), Expect = 0.84, Method: Compositional matrix adjust. Identities = 20/82 (24%), Positives = 42/82 (51%), Gaps = 6/82 (7%) Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 G G+NL ++++ S W + Q R + G + V +Y L+ +++I++ Sbjct: 1120 GLGINLTTADTVIIYDSDWNPQNDLQ------AEARAHRIGQTKTVQIYRLVTKDSIEQT 1173 Query: 180 VLQRLRTKSTIQDLLLNALKKE 201 +L+R +TK + L++ L K+ Sbjct: 1174 ILERAKTKMVLDALVVQGLNKK 1195 >gi|329764968|ref|ZP_08256555.1| SNF2-related protein [Candidatus Nitrosoarchaeum limnia SFB1] gi|329138505|gb|EGG42754.1| SNF2-related protein [Candidatus Nitrosoarchaeum limnia SFB1] Length = 574 Score = 37.7 bits (86), Expect = 0.84, Method: Compositional matrix adjust. Identities = 28/96 (29%), Positives = 46/96 (47%), Gaps = 6/96 (6%) Query: 101 IQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 I ++ +G+ L+ A + G+NL ++F L W H+Q +R+ + G Sbjct: 459 IDKFQKGESKLMIAGLRAGNVGINLTRA-KYVIFAELDWSPAIHRQAEDRL-----HRIG 512 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 K VF YYLI T+D+ V L KS D +++ Sbjct: 513 QKNTVFAYYLIGNGTLDDHVANILVDKSYEIDSIMD 548 >gi|209945988|gb|ACI97225.1| okra [Drosophila melanogaster] Length = 168 Score = 37.7 bits (86), Expect = 0.84, Method: Compositional matrix adjust. Identities = 23/73 (31%), Positives = 36/73 (49%), Gaps = 6/73 (8%) Query: 111 LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYL 170 L + G GLNL G N L F W+ +Q + R+ + G K+ ++Y L Sbjct: 97 LFMLSSKAGGCGLNL-IGANRLFMFDPDWNPANDEQAMARVW-----RDGQKKPCYIYRL 150 Query: 171 IAQNTIDELVLQR 183 +A +I+E +LQR Sbjct: 151 VASGSIEEKILQR 163 >gi|159109590|ref|XP_001705059.1| Transcriptional regulator ATRX, putative [Giardia lamblia ATCC 50803] gi|157433137|gb|EDO77385.1| Transcriptional regulator ATRX, putative [Giardia lamblia ATCC 50803] Length = 1367 Score = 37.7 bits (86), Expect = 0.84, Method: Compositional matrix adjust. Identities = 25/82 (30%), Positives = 42/82 (51%), Gaps = 6/82 (7%) Query: 122 GLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVL 181 GLNL G N ++ F+ W L+ +Q + R + G K V VY L NT++E ++ Sbjct: 739 GLNLT-GANRVILFAPAWSLQVEEQ-----AIARAYRMGQKHNVVVYKLACINTLEEKMV 792 Query: 182 QRLRTKSTIQDLLLNALKKETI 203 R K+ I ++ L+ K ++ Sbjct: 793 VRQLQKAGIANVTLDDEKHRSV 814 >gi|331245961|ref|XP_003335615.1| ISWI chromatin-remodeling complex ATPase ISW2 [Puccinia graminis f. sp. tritici CRL 75-36-700-3] gi|309314605|gb|EFP91196.1| ISWI chromatin-remodeling complex ATPase ISW2 [Puccinia graminis f. sp. tritici CRL 75-36-700-3] Length = 894 Score = 37.7 bits (86), Expect = 0.87, Method: Compositional matrix adjust. Identities = 27/97 (27%), Positives = 48/97 (49%), Gaps = 8/97 (8%) Query: 101 IQEWN-EGKIPLLFAHPASCGH-GLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQ 158 I E+N EG +F G G+NL +I+V F W+ + Q ++R + Sbjct: 397 IDEYNKEGSSKFVFLLTTRAGGLGINLTTA-DIVVLFDSDWNPQADLQAMDRA-----HR 450 Query: 159 AGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 G K+ V+V+ + +N ++E VL+R K + L++ Sbjct: 451 IGQKKQVYVFRFVTENAVEEKVLERAAQKLRLDQLVI 487 >gi|221369955|ref|YP_002521051.1| Helicase domain protein [Rhodobacter sphaeroides KD131] gi|221163007|gb|ACM03978.1| Helicase domain protein [Rhodobacter sphaeroides KD131] Length = 990 Score = 37.7 bits (86), Expect = 0.87, Method: Composition-based stats. Identities = 17/57 (29%), Positives = 37/57 (64%), Gaps = 4/57 (7%) Query: 122 GLNLQYGGNILVFFSLWWDLEEHQQMI---ERIGVTRQRQAGFKRAVFVYYLIAQNT 175 GLNL + + ++FFSL W+++ Q+I +R+G T +R+ G +R + ++ ++ + + Sbjct: 445 GLNLHHVADGIIFFSLPWEIDSIDQLIGRVDRLGATGERKGG-RRVIDIWRILIEGS 500 >gi|119385698|ref|YP_916753.1| helicase domain-containing protein [Paracoccus denitrificans PD1222] gi|119376293|gb|ABL71057.1| helicase domain protein [Paracoccus denitrificans PD1222] Length = 634 Score = 37.7 bits (86), Expect = 0.87, Method: Composition-based stats. Identities = 17/57 (29%), Positives = 37/57 (64%), Gaps = 4/57 (7%) Query: 122 GLNLQYGGNILVFFSLWWDLEEHQQMI---ERIGVTRQRQAGFKRAVFVYYLIAQNT 175 GLNL + + ++FFSL W+++ Q+I +R+G T +R+ G +R + ++ ++ + + Sbjct: 89 GLNLHHVADGIIFFSLPWEIDSIDQLIGRVDRLGATGERKGG-RRVIDIWRILIEGS 144 >gi|209945942|gb|ACI97202.1| okra [Drosophila simulans] Length = 168 Score = 37.7 bits (86), Expect = 0.88, Method: Compositional matrix adjust. Identities = 23/73 (31%), Positives = 36/73 (49%), Gaps = 6/73 (8%) Query: 111 LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYL 170 L + G GLNL G N L F W+ +Q + R+ + G K+ ++Y L Sbjct: 97 LFMLSSKAGGCGLNL-IGANRLFMFDPDWNPANDEQAMARVW-----RDGQKKPCYIYRL 150 Query: 171 IAQNTIDELVLQR 183 +A +I+E +LQR Sbjct: 151 VASGSIEEKILQR 163 >gi|209945934|gb|ACI97198.1| okra [Drosophila simulans] gi|209945936|gb|ACI97199.1| okra [Drosophila simulans] gi|209945938|gb|ACI97200.1| okra [Drosophila melanogaster] gi|209945940|gb|ACI97201.1| okra [Drosophila simulans] gi|209945944|gb|ACI97203.1| okra [Drosophila melanogaster] gi|209945946|gb|ACI97204.1| okra [Drosophila melanogaster] gi|209945948|gb|ACI97205.1| okra [Drosophila melanogaster] gi|209945950|gb|ACI97206.1| okra [Drosophila melanogaster] gi|209945952|gb|ACI97207.1| okra [Drosophila melanogaster] gi|209945954|gb|ACI97208.1| okra [Drosophila melanogaster] gi|209945956|gb|ACI97209.1| okra [Drosophila melanogaster] gi|209945958|gb|ACI97210.1| okra [Drosophila melanogaster] gi|209945962|gb|ACI97212.1| okra [Drosophila melanogaster] gi|209945964|gb|ACI97213.1| okra [Drosophila melanogaster] gi|209945966|gb|ACI97214.1| okra [Drosophila melanogaster] gi|209945968|gb|ACI97215.1| okra [Drosophila melanogaster] gi|209945970|gb|ACI97216.1| okra [Drosophila melanogaster] gi|209945972|gb|ACI97217.1| okra [Drosophila melanogaster] gi|209945974|gb|ACI97218.1| okra [Drosophila melanogaster] gi|209945976|gb|ACI97219.1| okra [Drosophila melanogaster] gi|209945978|gb|ACI97220.1| okra [Drosophila melanogaster] gi|209945980|gb|ACI97221.1| okra [Drosophila melanogaster] gi|209945982|gb|ACI97222.1| okra [Drosophila melanogaster] gi|209945984|gb|ACI97223.1| okra [Drosophila melanogaster] gi|209945986|gb|ACI97224.1| okra [Drosophila melanogaster] gi|209945990|gb|ACI97226.1| okra [Drosophila melanogaster] gi|209945992|gb|ACI97227.1| okra [Drosophila melanogaster] gi|209945996|gb|ACI97229.1| okra [Drosophila melanogaster] gi|209945998|gb|ACI97230.1| okra [Drosophila melanogaster] gi|209946000|gb|ACI97231.1| okra [Drosophila melanogaster] gi|209946002|gb|ACI97232.1| okra [Drosophila melanogaster] Length = 168 Score = 37.7 bits (86), Expect = 0.89, Method: Compositional matrix adjust. Identities = 23/73 (31%), Positives = 36/73 (49%), Gaps = 6/73 (8%) Query: 111 LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYL 170 L + G GLNL G N L F W+ +Q + R+ + G K+ ++Y L Sbjct: 97 LFMLSSKAGGCGLNL-IGANRLFMFDPDWNPANDEQAMARVW-----RDGQKKPCYIYRL 150 Query: 171 IAQNTIDELVLQR 183 +A +I+E +LQR Sbjct: 151 VASGSIEEKILQR 163 >gi|316932603|ref|YP_004107585.1| helicase domain-containing protein [Rhodopseudomonas palustris DX-1] gi|315600317|gb|ADU42852.1| helicase domain protein [Rhodopseudomonas palustris DX-1] Length = 956 Score = 37.7 bits (86), Expect = 0.89, Method: Compositional matrix adjust. Identities = 28/91 (30%), Positives = 49/91 (53%), Gaps = 7/91 (7%) Query: 91 GRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 G T D ++++ E +P+L + A G GLN+ +IL+ + L W+ ++ +R Sbjct: 563 GHTADDKRAAVEKF-EDDVPVLISTEAG-GEGLNMHRNCHILINYDLPWN---PSRISQR 617 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVL 181 IG R + G K+ V V+ A++TID +L Sbjct: 618 IG--RLYRYGQKQRVIVFNFHAKDTIDNEIL 646 >gi|261420703|ref|YP_003254385.1| SNF2-related protein [Geobacillus sp. Y412MC61] gi|319768373|ref|YP_004133874.1| SNF2-related protein [Geobacillus sp. Y412MC52] gi|261377160|gb|ACX79903.1| SNF2-related protein [Geobacillus sp. Y412MC61] gi|317113239|gb|ADU95731.1| SNF2-related protein [Geobacillus sp. Y412MC52] Length = 924 Score = 37.7 bits (86), Expect = 0.89, Method: Compositional matrix adjust. Identities = 26/94 (27%), Positives = 42/94 (44%), Gaps = 6/94 (6%) Query: 101 IQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 + E+ K P+ + G GLNL N ++ F WW+ +E R + G Sbjct: 808 VDEFQAKKAPIFLLSLKAGGTGLNLT-AANHVIHFDRWWN-----PAVENQATDRAYRIG 861 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 + V V+ LI TI+E + + L K + DL+ Sbjct: 862 QTKFVHVHKLITIGTIEEKIDEMLEQKQALADLI 895 >gi|330804383|ref|XP_003290175.1| hypothetical protein DICPUDRAFT_98599 [Dictyostelium purpureum] gi|325079732|gb|EGC33319.1| hypothetical protein DICPUDRAFT_98599 [Dictyostelium purpureum] Length = 1134 Score = 37.7 bits (86), Expect = 0.90, Method: Compositional matrix adjust. Identities = 24/75 (32%), Positives = 35/75 (46%), Gaps = 7/75 (9%) Query: 122 GLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVL 181 GLNL +L+F W I+ V R + G KR V VY LI TI+E + Sbjct: 744 GLNLTSADRVLIFDPSW-------NTIDNQAVDRAYRIGQKRDVVVYRLITCGTIEEKIY 796 Query: 182 QRLRTKSTIQDLLLN 196 ++ K ++ +LN Sbjct: 797 RKQVFKGSLMKTMLN 811 >gi|134114696|ref|XP_774056.1| hypothetical protein CNBH1020 [Cryptococcus neoformans var. neoformans B-3501A] gi|50256686|gb|EAL19409.1| hypothetical protein CNBH1020 [Cryptococcus neoformans var. neoformans B-3501A] Length = 1514 Score = 37.7 bits (86), Expect = 0.90, Method: Compositional matrix adjust. Identities = 21/88 (23%), Positives = 45/88 (51%), Gaps = 6/88 (6%) Query: 118 SCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 + G G+NL+ +++F S + + Q M R + G +R V ++ L+++ TI+ Sbjct: 834 AGGLGINLETADTVIIFDSDYNPQNDLQAM------ARAHRIGQQRHVSIFRLVSKGTIE 887 Query: 178 ELVLQRLRTKSTIQDLLLNALKKETIHV 205 E +L+R K ++ ++N + H+ Sbjct: 888 EDILERAMRKMLLEYAIINKMDTTGAHI 915 >gi|322707430|gb|EFY99008.1| DNA repair and recombination protein RAD5B [Metarhizium anisopliae ARSEF 23] Length = 769 Score = 37.7 bits (86), Expect = 0.91, Method: Compositional matrix adjust. Identities = 26/97 (26%), Positives = 46/97 (47%), Gaps = 9/97 (9%) Query: 105 NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA 164 N+ + ++ A A C GLNL + ++ WW Q I+R+ + G R Sbjct: 662 NDAETRVMLASLAVCSVGLNL-VSADTVILSDSWWAPAIEDQAIDRV-----HRLGQTRK 715 Query: 165 VFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 V+ LI + T++E VL + K +DL+ A +++ Sbjct: 716 TTVWRLIVEGTVEERVLDVQKEK---RDLVTKAFQEK 749 >gi|291233872|ref|XP_002736874.1| PREDICTED: DNA repair and recombination protein RAD54-like [Saccoglossus kowalevskii] Length = 678 Score = 37.7 bits (86), Expect = 0.91, Method: Compositional matrix adjust. Identities = 23/77 (29%), Positives = 38/77 (49%), Gaps = 6/77 (7%) Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 G GLNL G N LV F W+ Q + R+ + G K+ ++Y L++ TI+E Sbjct: 512 GCGLNL-IGANRLVMFDPDWNPANDDQAMARVW-----RDGQKKQCYIYRLLSTGTIEEK 565 Query: 180 VLQRLRTKSTIQDLLLN 196 + QR K + +++ Sbjct: 566 IFQRQAHKKALSSCVVD 582 >gi|313898327|ref|ZP_07831864.1| helicase C-terminal domain protein [Clostridium sp. HGF2] gi|312956709|gb|EFR38340.1| helicase C-terminal domain protein [Clostridium sp. HGF2] Length = 377 Score = 37.7 bits (86), Expect = 0.92, Method: Compositional matrix adjust. Identities = 22/82 (26%), Positives = 41/82 (50%), Gaps = 6/82 (7%) Query: 106 EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 E +P + + G GLNL N ++ F WW+ +E R + G K+ V Sbjct: 269 EAYVPYIVLSLKAAGTGLNLTA-ANHVIHFDRWWN-----PAVENQATDRAFRIGQKKNV 322 Query: 166 FVYYLIAQNTIDELVLQRLRTK 187 V+ LI++ T++E + + +++K Sbjct: 323 IVHKLISKGTVEEKIDELIKSK 344 >gi|115921268|ref|XP_787494.2| PREDICTED: similar to MGC81308 protein, partial [Strongylocentrotus purpuratus] gi|115974812|ref|XP_001181201.1| PREDICTED: similar to MGC81308 protein, partial [Strongylocentrotus purpuratus] Length = 629 Score = 37.7 bits (86), Expect = 0.92, Method: Compositional matrix adjust. Identities = 23/78 (29%), Positives = 42/78 (53%), Gaps = 6/78 (7%) Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 G GLNL G + L+ + + W+ Q + R+ + G K+ V++Y LI TI+E Sbjct: 495 GVGLNL-IGASRLLLYDIDWNPANDLQAMARVW-----RDGQKKTVYIYRLITAGTIEEK 548 Query: 180 VLQRLRTKSTIQDLLLNA 197 + QR +K ++ +++A Sbjct: 549 IYQRQISKQSLSGAVVDA 566 >gi|226943915|ref|YP_002798988.1| DEAD box and SNF-like helicase domain-containing protein [Azotobacter vinelandii DJ] gi|226718842|gb|ACO78013.1| DEAD box and SNF-like helicase domain-containing protein [Azotobacter vinelandii DJ] Length = 1357 Score = 37.7 bits (86), Expect = 0.92, Method: Composition-based stats. Identities = 24/76 (31%), Positives = 37/76 (48%), Gaps = 6/76 (7%) Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 G GLNL + ++ WW+ +E R + G +R V +Y L+A+NTI+E Sbjct: 1267 GTGLNLT-AADYVIHLDPWWN-----PAVEDQASDRAHRMGQQRPVTIYRLVAENTIEER 1320 Query: 180 VLQRLRTKSTIQDLLL 195 +L K + D LL Sbjct: 1321 ILALHGQKRDLADSLL 1336 >gi|321261786|ref|XP_003195612.1| chromodomain helicase [Cryptococcus gattii WM276] gi|317462086|gb|ADV23825.1| Chromodomain helicase, putative [Cryptococcus gattii WM276] Length = 1502 Score = 37.7 bits (86), Expect = 0.93, Method: Compositional matrix adjust. Identities = 21/88 (23%), Positives = 45/88 (51%), Gaps = 6/88 (6%) Query: 118 SCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 + G G+NL+ +++F S + + Q M R + G +R V ++ L+++ TI+ Sbjct: 822 AGGLGINLETADTVIIFDSDYNPQNDLQAM------ARAHRIGQQRHVSIFRLVSKGTIE 875 Query: 178 ELVLQRLRTKSTIQDLLLNALKKETIHV 205 E +L+R K ++ ++N + H+ Sbjct: 876 EDILERAMRKMLLEYAIINKMDTTGAHI 903 >gi|209945994|gb|ACI97228.1| okra [Drosophila melanogaster] Length = 167 Score = 37.7 bits (86), Expect = 0.93, Method: Compositional matrix adjust. Identities = 23/73 (31%), Positives = 36/73 (49%), Gaps = 6/73 (8%) Query: 111 LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYL 170 L + G GLNL G N L F W+ +Q + R+ + G K+ ++Y L Sbjct: 96 LFMLSSKAGGCGLNL-IGANRLFMFDPDWNPANDEQAMARVW-----RDGQKKPCYIYRL 149 Query: 171 IAQNTIDELVLQR 183 +A +I+E +LQR Sbjct: 150 VASGSIEEKILQR 162 >gi|50549907|ref|XP_502425.1| YALI0D04961p [Yarrowia lipolytica] gi|74689630|sp|Q6CA87|SWR1_YARLI RecName: Full=Helicase SWR1 gi|49648293|emb|CAG80613.1| YALI0D04961p [Yarrowia lipolytica] Length = 1772 Score = 37.7 bits (86), Expect = 0.93, Method: Compositional matrix adjust. Identities = 21/91 (23%), Positives = 46/91 (50%), Gaps = 6/91 (6%) Query: 105 NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA 164 + KIP+ S G G+NL G + ++F+ W+ +Q +R + G R Sbjct: 1533 TDPKIPVFILSTRSGGLGINLT-GADTVIFYDSDWNPSMDKQCQDRC-----HRIGQTRD 1586 Query: 165 VFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 V +Y ++++TI+ +L++ K + ++++ Sbjct: 1587 VHIYRFVSEHTIESNILKKANQKQILDNVVI 1617 >gi|321252272|ref|XP_003192348.1| hypothetical protein CGB_B6660W [Cryptococcus gattii WM276] gi|317458816|gb|ADV20561.1| Hypothetical protein CGB_B6660W [Cryptococcus gattii WM276] Length = 1283 Score = 37.7 bits (86), Expect = 0.94, Method: Compositional matrix adjust. Identities = 39/149 (26%), Positives = 65/149 (43%), Gaps = 21/149 (14%) Query: 59 LEVIIEKANAAPIIVAYHFNS--DLARL---QKAFPQGRTL-----DKDPCTIQEWN--- 105 ++ IIE+ + IIV F DL + ++ P + + D+ TI+ +N Sbjct: 1110 IDAIIEQDPSQKIIVFSQFVEYIDLCSIFLRRRNIPHAKYVGSMKQDEREDTIKNFNRPM 1169 Query: 106 -EGKIPLLFAHPASCGH-GLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKR 163 E K P CG GLNL +++ W E+Q V R + G R Sbjct: 1170 EEDKSPRCLLMSLKCGGVGLNLCIANHVICLDLAWNAATENQ------AVDRAHRIGQTR 1223 Query: 164 AVFVYYLIAQNTIDELVLQRLRTKSTIQD 192 V V+ L+ +NTID+ +++ + K + D Sbjct: 1224 EVVVHRLVVENTIDQRLMELQQQKQALSD 1252 >gi|34495520|ref|NP_899735.1| SWI/SNF family helicase [Chromobacterium violaceum ATCC 12472] gi|34101375|gb|AAQ57744.1| probable SWI/SNF family helicase [Chromobacterium violaceum ATCC 12472] Length = 910 Score = 37.7 bits (86), Expect = 0.94, Method: Composition-based stats. Identities = 24/76 (31%), Positives = 37/76 (48%), Gaps = 6/76 (7%) Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 G GLNL + ++ WW+ +E R + G +R V VY L+A TI+E Sbjct: 818 GTGLNLT-AADYVIHLDPWWN-----PAVEDQASDRAYRMGQQRPVTVYRLVAAGTIEEK 871 Query: 180 VLQRLRTKSTIQDLLL 195 +++ R K + D LL Sbjct: 872 IVELHRDKRALADSLL 887 >gi|32475836|ref|NP_868830.1| SWF/SNF family helicase [Rhodopirellula baltica SH 1] gi|32446379|emb|CAD76207.1| probable swi/snf family helicase 2 [Rhodopirellula baltica SH 1] Length = 1386 Score = 37.7 bits (86), Expect = 0.96, Method: Compositional matrix adjust. Identities = 26/102 (25%), Positives = 44/102 (43%), Gaps = 6/102 (5%) Query: 96 KDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTR 155 K ++ + +G+ + + G GLNL + ++ WW+ +E R Sbjct: 1274 KRKTSVDAFQDGEGDVFLISLKAGGVGLNLT-AADYVIHMDPWWN-----PAVEDQASDR 1327 Query: 156 QRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + G +R V VY I TI+E +LQ +K + D LL Sbjct: 1328 AHRMGQQRPVTVYRFITTGTIEERILQLHESKRDLADSLLEG 1369 >gi|320581375|gb|EFW95596.1| hypothetical protein HPODL_2930 [Pichia angusta DL-1] Length = 687 Score = 37.7 bits (86), Expect = 0.96, Method: Compositional matrix adjust. Identities = 25/97 (25%), Positives = 49/97 (50%), Gaps = 10/97 (10%) Query: 101 IQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQM--IERIGVTRQRQ 158 I ++ ++ + + G GLNL ++++F S W + Q M + RIG T Sbjct: 517 IDRFSTEEVDVFLLSTRAGGLGLNLTAADSVILFDSDWNPQVDLQAMDRVHRIGQT---- 572 Query: 159 AGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 + V VY L+ NT++E++L + +K ++ L++ Sbjct: 573 ----KPVSVYRLVIANTVEEIMLAKADSKRRLERLVI 605 >gi|307180292|gb|EFN68325.1| Lymphoid-specific helicase [Camponotus floridanus] Length = 773 Score = 37.7 bits (86), Expect = 0.96, Method: Compositional matrix adjust. Identities = 22/92 (23%), Positives = 43/92 (46%), Gaps = 6/92 (6%) Query: 105 NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA 164 N+ + L + G GLNL ++++ S W + Q M R + G + Sbjct: 627 NDPNVFLFLISTRAGGVGLNLASADTVIIYDSDWNPQADIQAM------ARCHRIGQTKP 680 Query: 165 VFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 V VY L + T+DE +++R K ++ ++++ Sbjct: 681 VVVYRLCTRGTVDETIIKRSEAKRILEKVVIS 712 >gi|190348945|gb|EDK41499.2| hypothetical protein PGUG_05597 [Meyerozyma guilliermondii ATCC 6260] Length = 814 Score = 37.7 bits (86), Expect = 0.96, Method: Compositional matrix adjust. Identities = 24/91 (26%), Positives = 43/91 (47%), Gaps = 6/91 (6%) Query: 106 EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 EG+ + + G G+NL G N L+ W+ QQ + R+ + G K+ Sbjct: 639 EGQEFIFLLSSKAGGCGINL-IGANRLILLDPDWNPAADQQALARVW-----RDGQKKDC 692 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 F+Y I+ TI+E + QR K ++ +++ Sbjct: 693 FIYRFISTGTIEEKIFQRQSMKLSLSSCVVD 723 >gi|126643947|ref|XP_001388153.1| SWI/SNF-related, matrix associated, actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1 [Cryptosporidium parvum Iowa II] gi|126117230|gb|EAZ51330.1| SWI/SNF-related, matrix associated, actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1 [Cryptosporidium parvum Iowa II] Length = 807 Score = 37.7 bits (86), Expect = 0.96, Method: Compositional matrix adjust. Identities = 22/92 (23%), Positives = 48/92 (52%), Gaps = 6/92 (6%) Query: 101 IQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 I+++ ++PL + G GLNL ++++ DL+ + Q IE+ R + G Sbjct: 712 IEKFQTTQVPLFLLSTKAAGQGLNLTVASSVIMM-----DLDYNPQ-IEKQAEDRVHRIG 765 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTIQD 192 + V ++ L+ ++TI+E + ++K T+ + Sbjct: 766 QSKQVKIFKLVCKDTIEENIFNCCQSKLTLDN 797 >gi|66827541|ref|XP_647125.1| SNF2-related domain-containing protein [Dictyostelium discoideum AX4] gi|60475296|gb|EAL73231.1| SNF2-related domain-containing protein [Dictyostelium discoideum AX4] Length = 1159 Score = 37.7 bits (86), Expect = 0.96, Method: Composition-based stats. Identities = 24/87 (27%), Positives = 45/87 (51%), Gaps = 6/87 (6%) Query: 109 IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVY 168 IP+ S G G+NL N+++F+ L ++ + ++R R + G +R V +Y Sbjct: 1053 IPVFLLSTNSGGLGINLTCA-NVVIFYDLSFNPQ-----VDRQAEDRAHRLGQEREVIIY 1106 Query: 169 YLIAQNTIDELVLQRLRTKSTIQDLLL 195 L+A+NT+D + + K + D +L Sbjct: 1107 KLLAENTVDINIHESANQKKKLNDNVL 1133 >gi|291547356|emb|CBL20464.1| Superfamily II DNA/RNA helicases, SNF2 family [Ruminococcus sp. SR1/5] Length = 1130 Score = 37.7 bits (86), Expect = 0.97, Method: Compositional matrix adjust. Identities = 25/97 (25%), Positives = 43/97 (44%), Gaps = 6/97 (6%) Query: 101 IQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 + +NE + + G GLNL +I++ + WW+L Q +R + G Sbjct: 1021 VHAFNEDDTSVFCISLKAGGTGLNLT-AADIVIHYDPWWNLAVQNQATDR-----AHRIG 1074 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + V VY L ++TI+E + K + D +LN Sbjct: 1075 QQNVVSVYRLFMKDTIEERIRALQERKRELADEILNG 1111 >gi|67624283|ref|XP_668424.1| SWI/SNF-related, matrix associated, actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1 [Cryptosporidium hominis TU502] gi|54659629|gb|EAL38197.1| SWI/SNF-related, matrix associated, actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1 [Cryptosporidium hominis] Length = 807 Score = 37.7 bits (86), Expect = 0.97, Method: Compositional matrix adjust. Identities = 22/92 (23%), Positives = 48/92 (52%), Gaps = 6/92 (6%) Query: 101 IQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 I+++ ++PL + G GLNL ++++ DL+ + Q IE+ R + G Sbjct: 712 IEKFQTTQVPLFLLSTKAAGQGLNLTVASSVIMM-----DLDYNPQ-IEKQAEDRVHRIG 765 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTIQD 192 + V ++ L+ ++TI+E + ++K T+ + Sbjct: 766 QSKQVKIFKLVCKDTIEENIFNCCQSKLTLDN 797 >gi|328354133|emb|CCA40530.1| hypothetical protein PP7435_Chr4-0362 [Pichia pastoris CBS 7435] Length = 689 Score = 37.7 bits (86), Expect = 0.98, Method: Compositional matrix adjust. Identities = 24/80 (30%), Positives = 41/80 (51%), Gaps = 7/80 (8%) Query: 100 TIQEWNEGKIPLLFAHPASCGH-GLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQ 158 T++E+NE + CG GLNL N +V + WW+ + Q I+R+ + Sbjct: 607 TLKEFNENPETTVLLCSLKCGAIGLNLTIA-NRVVIYDPWWNPQVEDQAIDRV-----YR 660 Query: 159 AGFKRAVFVYYLIAQNTIDE 178 G + V VY LI +++++E Sbjct: 661 FGQTKEVDVYRLIIKDSVEE 680 >gi|58271342|ref|XP_572827.1| transcription regulator [Cryptococcus neoformans var. neoformans JEC21] gi|57229086|gb|AAW45520.1| transcription regulator, putative [Cryptococcus neoformans var. neoformans JEC21] Length = 1519 Score = 37.7 bits (86), Expect = 0.98, Method: Compositional matrix adjust. Identities = 21/88 (23%), Positives = 45/88 (51%), Gaps = 6/88 (6%) Query: 118 SCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 + G G+NL+ +++F S + + Q M R + G +R V ++ L+++ TI+ Sbjct: 839 AGGLGINLETADTVIIFDSDYNPQNDLQAM------ARAHRIGQQRHVSIFRLVSKGTIE 892 Query: 178 ELVLQRLRTKSTIQDLLLNALKKETIHV 205 E +L+R K ++ ++N + H+ Sbjct: 893 EDILERAMRKMLLEYAIINKMDTTGAHI 920 >gi|289580072|ref|YP_003478538.1| helicase [Natrialba magadii ATCC 43099] gi|289529625|gb|ADD03976.1| helicase domain protein [Natrialba magadii ATCC 43099] Length = 584 Score = 37.7 bits (86), Expect = 0.99, Method: Compositional matrix adjust. Identities = 25/73 (34%), Positives = 40/73 (54%), Gaps = 6/73 (8%) Query: 112 LFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLI 171 + + G NLQ+ N+LV L W+ +Q RIG R + G KR VF++ + Sbjct: 434 ILVSTDAMSEGRNLQFC-NLLVNMDLPWNPMRVEQ---RIG--RVHRIGQKRDVFIFNMA 487 Query: 172 AQNTIDELVLQRL 184 ++T++E VL+RL Sbjct: 488 LKDTVEEYVLERL 500 >gi|22326612|ref|NP_196132.2| SNF2 domain-containing protein / helicase domain-containing protein / RING finger domain-containing protein [Arabidopsis thaliana] gi|20260624|gb|AAM13210.1| helicase-like transcription factor-like protein [Arabidopsis thaliana] gi|31711770|gb|AAP68241.1| At5g05130 [Arabidopsis thaliana] gi|332003449|gb|AED90832.1| DNA/RNA helicase [Arabidopsis thaliana] Length = 862 Score = 37.7 bits (86), Expect = 0.99, Method: Compositional matrix adjust. Identities = 22/72 (30%), Positives = 38/72 (52%), Gaps = 6/72 (8%) Query: 111 LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYL 170 +L A + G G+NL + F WW+ +Q ++RI + G K+ V + + Sbjct: 762 VLLASLKASGTGINLTAASRVY-LFDPWWNPAVEEQAMDRI-----HRIGQKQEVKMIRM 815 Query: 171 IAQNTIDELVLQ 182 IA+N+I+E VL+ Sbjct: 816 IARNSIEERVLE 827 >gi|320006862|gb|ADW01712.1| SNF2-related protein [Streptomyces flavogriseus ATCC 33331] Length = 992 Score = 37.7 bits (86), Expect = 1.00, Method: Composition-based stats. Identities = 25/105 (23%), Positives = 45/105 (42%), Gaps = 6/105 (5%) Query: 91 GRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 G + + + + G++P+ + G GLNL ++ V WW+ +E Sbjct: 868 GTPIAEREAMVDRFQAGRVPVFLLSLKAAGTGLNLTRAEHV-VHVDRWWN-----PAVEA 921 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 R + G R V V+ LI + TI++ + L K + D +L Sbjct: 922 QATDRAYRIGQTRPVQVHRLITEGTIEDRIAAMLARKQGLADAVL 966 >gi|228904537|ref|ZP_04068620.1| hypothetical protein bthur0014_56750 [Bacillus thuringiensis IBL 4222] gi|228855101|gb|EEM99677.1| hypothetical protein bthur0014_56750 [Bacillus thuringiensis IBL 4222] Length = 413 Score = 37.7 bits (86), Expect = 1.00, Method: Compositional matrix adjust. Identities = 45/195 (23%), Positives = 85/195 (43%), Gaps = 20/195 (10%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEV 61 K Y++F++ ++ E + A+K + QLA Y+E K ++ ++ Sbjct: 229 KMYNEFKKHHIIEIGEELLIGDTPAAKKLYLRQLAGS---YNEHK---------LQYIKD 276 Query: 62 IIEKANAAPIIVAYHFNSDLARLQKAFPQG-RTLDKDPCTIQEWNEGKIPLLFAHPASCG 120 +IE N II+ Y+F + L + T++ D + + + + + Sbjct: 277 LIESTNDR-IIIFYNFKKEYMALVDLIERPIATINGDIKDLSAYEKHDNSVTLIQYQAGA 335 Query: 121 HGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELV 180 GLNLQ N +V+F+L + ++ E+ R + G KR F YYL+ +I+ + Sbjct: 336 MGLNLQ-KANKIVYFTL----TDKSELFEQ-SKKRTHRIGQKRPCFYYYLLTDGSIEWRM 389 Query: 181 LQRLRTKSTIQDLLL 195 L L+ + D L Sbjct: 390 LDVLKERRDYTDALF 404 >gi|25144179|ref|NP_498468.2| yeast ISW (imitation SWI) homolog family member (isw-1) [Caenorhabditis elegans] gi|21264515|sp|P41877|ISW1_CAEEL RecName: Full=Chromatin-remodeling complex ATPase chain isw-1; AltName: Full=Nucleosome-remodeling factor subunit isw-1 gi|16950408|gb|AAA50636.2| Yeast isw (imitation swi) homolog protein 1 [Caenorhabditis elegans] Length = 1009 Score = 37.7 bits (86), Expect = 1.00, Method: Compositional matrix adjust. Identities = 20/78 (25%), Positives = 41/78 (52%), Gaps = 6/78 (7%) Query: 118 SCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 + G G+NL ++++ S W + Q M R + G K+ V V+ LI +NT+D Sbjct: 513 AGGLGINLATADVVIIYDSDWNPQSDLQAM------DRAHRIGQKKQVRVFRLITENTVD 566 Query: 178 ELVLQRLRTKSTIQDLLL 195 E ++++ K + ++++ Sbjct: 567 ERIIEKAEAKLRLDNIVI 584 >gi|330841728|ref|XP_003292844.1| hypothetical protein DICPUDRAFT_58185 [Dictyostelium purpureum] gi|325076886|gb|EGC30638.1| hypothetical protein DICPUDRAFT_58185 [Dictyostelium purpureum] Length = 931 Score = 37.7 bits (86), Expect = 1.0, Method: Compositional matrix adjust. Identities = 21/67 (31%), Positives = 36/67 (53%), Gaps = 12/67 (17%) Query: 117 ASCGHGLNLQYGGNILVFFSLWWD---LEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQ 173 + G GL L N++VF L+W L + + + RIG T+ V+++YLI + Sbjct: 169 TAAGTGLTLT-ASNLVVFVELYWTPGVLRQAEDRVHRIGQTKD--------VYIHYLIGK 219 Query: 174 NTIDELV 180 NT+D+ + Sbjct: 220 NTLDDRI 226 >gi|308198272|ref|XP_001386950.2| protein required for X-ray damage repair, mitotic recombination, and full meiotic recombination. mRNA increases in meiosis [Scheffersomyces stipitis CBS 6054] gi|149388940|gb|EAZ62927.2| protein required for X-ray damage repair, mitotic recombination, and full meiotic recombination. mRNA increases in meiosis [Pichia stipitis CBS 6054] Length = 821 Score = 37.7 bits (86), Expect = 1.0, Method: Compositional matrix adjust. Identities = 22/77 (28%), Positives = 38/77 (49%), Gaps = 6/77 (7%) Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 G G+NL G N L+ W+ QQ + R+ + G K+ F+Y I+ TI+E Sbjct: 660 GCGINL-IGANRLILMDPDWNPAADQQALARVW-----RDGQKKDCFIYRFISTGTIEEK 713 Query: 180 VLQRLRTKSTIQDLLLN 196 + QR K ++ +++ Sbjct: 714 IFQRQSMKMSLSSCVVD 730 >gi|158320075|ref|YP_001512582.1| non-specific serine/threonine protein kinase [Alkaliphilus oremlandii OhILAs] gi|158140274|gb|ABW18586.1| Non-specific serine/threonine protein kinase [Alkaliphilus oremlandii OhILAs] Length = 1085 Score = 37.7 bits (86), Expect = 1.0, Method: Compositional matrix adjust. Identities = 23/95 (24%), Positives = 45/95 (47%), Gaps = 6/95 (6%) Query: 101 IQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 + ++N+G + + G GLNL G ++++ F WW+ +E R + G Sbjct: 975 VSDFNKGNSDVFLISLKAGGTGLNLT-GADMVIHFDPWWN-----PAVEEQATDRAYRIG 1028 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 + +V V LI + TI+E + + K + D ++ Sbjct: 1029 QQNSVHVMKLITKGTIEEKIAKLQERKRELIDAVI 1063 >gi|221508291|gb|EEE33878.1| helicase, putative [Toxoplasma gondii VEG] Length = 998 Score = 37.7 bits (86), Expect = 1.0, Method: Compositional matrix adjust. Identities = 27/93 (29%), Positives = 39/93 (41%), Gaps = 5/93 (5%) Query: 105 NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA 164 N+ + +L + G GLNLQ I WW+ Q I+R QR + Sbjct: 892 NDPSLKVLLISLKAGGEGLNLQIASRIF-LMDPWWNPAAEMQAIQRAHRIGQRH----KE 946 Query: 165 VFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 V IA+ TI+E +LQ K + D + A Sbjct: 947 VIAIRFIAEKTIEERILQLQEKKQLVFDGTVGA 979 >gi|325982657|ref|YP_004295059.1| helicase domain-containing protein [Nitrosomonas sp. AL212] gi|325532176|gb|ADZ26897.1| helicase domain protein [Nitrosomonas sp. AL212] Length = 934 Score = 37.7 bits (86), Expect = 1.0, Method: Compositional matrix adjust. Identities = 25/78 (32%), Positives = 43/78 (55%), Gaps = 7/78 (8%) Query: 118 SCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 + G G+NLQ +I+V F L W+ ++++R+G R + G KR V V+ + A T+D Sbjct: 586 AGGEGINLQRNCHIIVNFDLPWN---PMRLVQRVG--RLYRYGQKRKVIVFNMHAPQTLD 640 Query: 178 ELVLQRL--RTKSTIQDL 193 ++Q L R + D+ Sbjct: 641 ADIMQMLYFRISQVVLDM 658 >gi|322499392|emb|CBZ34465.1| unnamed protein product [Leishmania donovani BPK282A1] Length = 1126 Score = 37.7 bits (86), Expect = 1.0, Method: Composition-based stats. Identities = 24/68 (35%), Positives = 36/68 (52%), Gaps = 6/68 (8%) Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 G GLNL G N L+ F W+ Q + R+ + G K+ VF+Y L++ TI+E Sbjct: 873 GVGLNL-IGANRLILFDPDWNPANDAQAMGRVW-----RDGQKKRVFIYRLLSTGTIEEK 926 Query: 180 VLQRLRTK 187 + QR +K Sbjct: 927 IYQRQVSK 934 >gi|322492128|emb|CBZ27402.1| DNA repair and recombination protein RAD54,putative [Leishmania mexicana MHOM/GT/2001/U1103] Length = 1130 Score = 37.7 bits (86), Expect = 1.0, Method: Composition-based stats. Identities = 24/68 (35%), Positives = 36/68 (52%), Gaps = 6/68 (8%) Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 G GLNL G N L+ F W+ Q + R+ + G K+ VF+Y L++ TI+E Sbjct: 880 GVGLNL-IGANRLILFDPDWNPANDAQAMGRVW-----RDGQKKRVFIYRLLSTGTIEEK 933 Query: 180 VLQRLRTK 187 + QR +K Sbjct: 934 IYQRQVSK 941 >gi|146087788|ref|XP_001465905.1| DNA repair and recombination protein RAD54 [Leishmania infantum JPCM5] gi|134070006|emb|CAM68336.1| putative DNA repair and recombination protein RAD54 [Leishmania infantum JPCM5] Length = 1126 Score = 37.7 bits (86), Expect = 1.0, Method: Composition-based stats. Identities = 24/68 (35%), Positives = 36/68 (52%), Gaps = 6/68 (8%) Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 G GLNL G N L+ F W+ Q + R+ + G K+ VF+Y L++ TI+E Sbjct: 873 GVGLNL-IGANRLILFDPDWNPANDAQAMGRVW-----RDGQKKRVFIYRLLSTGTIEEK 926 Query: 180 VLQRLRTK 187 + QR +K Sbjct: 927 IYQRQVSK 934 >gi|154338237|ref|XP_001565343.1| DNA repair and recombination protein RAD54 [Leishmania braziliensis MHOM/BR/75/M2904] gi|134062392|emb|CAM42253.1| putative DNA repair and recombination protein RAD54 [Leishmania braziliensis MHOM/BR/75/M2904] Length = 1126 Score = 37.7 bits (86), Expect = 1.0, Method: Composition-based stats. Identities = 24/68 (35%), Positives = 36/68 (52%), Gaps = 6/68 (8%) Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 G GLNL G N L+ F W+ Q + R+ + G K+ VF+Y L++ TI+E Sbjct: 874 GVGLNL-IGANRLILFDPDWNPANDAQAMGRVW-----RDGQKKRVFIYRLLSTGTIEEK 927 Query: 180 VLQRLRTK 187 + QR +K Sbjct: 928 IYQRQVSK 935 >gi|60390959|sp|Q9FF61|SM3L1_ARATH RecName: Full=Putative SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 3-like 1; Short=SMARCA3-like protein 1 gi|10178052|dbj|BAB11535.1| helicase-like transcription factor-like protein [Arabidopsis thaliana] Length = 881 Score = 37.7 bits (86), Expect = 1.0, Method: Compositional matrix adjust. Identities = 22/72 (30%), Positives = 38/72 (52%), Gaps = 6/72 (8%) Query: 111 LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYL 170 +L A + G G+NL + F WW+ +Q ++RI + G K+ V + + Sbjct: 781 VLLASLKASGTGINLTAASRVY-LFDPWWNPAVEEQAMDRI-----HRIGQKQEVKMIRM 834 Query: 171 IAQNTIDELVLQ 182 IA+N+I+E VL+ Sbjct: 835 IARNSIEERVLE 846 >gi|302698345|ref|XP_003038851.1| hypothetical protein SCHCODRAFT_104375 [Schizophyllum commune H4-8] gi|300112548|gb|EFJ03949.1| hypothetical protein SCHCODRAFT_104375 [Schizophyllum commune H4-8] Length = 1135 Score = 37.7 bits (86), Expect = 1.1, Method: Composition-based stats. Identities = 22/71 (30%), Positives = 35/71 (49%), Gaps = 6/71 (8%) Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 G GLNL N + WW+ Q I+R+ + G ++ VFV + I +TI+ Sbjct: 1042 GVGLNLT-NANYVFMMDCWWNAATENQAIDRV-----HRLGQEKPVFVKHFIISDTIEGR 1095 Query: 180 VLQRLRTKSTI 190 +LQ + K+ I Sbjct: 1096 ILQIQKRKTAI 1106 >gi|282890240|ref|ZP_06298770.1| hypothetical protein pah_c014o119 [Parachlamydia acanthamoebae str. Hall's coccus] gi|281499897|gb|EFB42186.1| hypothetical protein pah_c014o119 [Parachlamydia acanthamoebae str. Hall's coccus] Length = 883 Score = 37.7 bits (86), Expect = 1.1, Method: Compositional matrix adjust. Identities = 36/142 (25%), Positives = 60/142 (42%), Gaps = 18/142 (12%) Query: 53 DEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQ---------GRTLDKDPCTIQE 103 D ++ LE + E+ A +V F S L + K F + G T +++ Q Sbjct: 721 DVLMQDLETLAEEGKKA--LVYSQFTSMLGLIAKEFQKRGWNFVYLDGSTHNREKVVTQF 778 Query: 104 WNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKR 163 + IP + G GLNL + + F WW+ + IE + R + G + Sbjct: 779 QEDASIPFFLISLKAGGVGLNLT-SADYVYLFDPWWN-----EAIENQAIDRAHRIGRQD 832 Query: 164 AVFVYYLIAQNTIDELVLQRLR 185 V LIA +I+E + Q+L+ Sbjct: 833 TVIAKRLIAIESIEEKI-QKLK 853 >gi|299756460|ref|XP_001829349.2| DNA repair protein RAD5 [Coprinopsis cinerea okayama7#130] gi|298411686|gb|EAU92309.2| DNA repair protein RAD5 [Coprinopsis cinerea okayama7#130] Length = 1155 Score = 37.7 bits (86), Expect = 1.1, Method: Composition-based stats. Identities = 21/71 (29%), Positives = 35/71 (49%), Gaps = 6/71 (8%) Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 G GLNL N + WW+ Q I+R+ + G ++ V+V + + NTI+ Sbjct: 1061 GVGLNLT-AANHVFMMDCWWNAATENQAIDRV-----HRIGQEKTVYVKHFVISNTIEGR 1114 Query: 180 VLQRLRTKSTI 190 +LQ + K+ I Sbjct: 1115 ILQIQKRKTAI 1125 >gi|255728815|ref|XP_002549333.1| DNA repair and recombination protein RAD54 [Candida tropicalis MYA-3404] gi|240133649|gb|EER33205.1| DNA repair and recombination protein RAD54 [Candida tropicalis MYA-3404] Length = 847 Score = 37.7 bits (86), Expect = 1.1, Method: Compositional matrix adjust. Identities = 22/64 (34%), Positives = 32/64 (50%), Gaps = 6/64 (9%) Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 G G+NL G N LV W+ QQ + R+ + G K+ F+Y I+ TI+E Sbjct: 685 GCGINL-IGANRLVLIDPDWNPASDQQALARVW-----RDGQKKDCFIYRFISTGTIEEK 738 Query: 180 VLQR 183 + QR Sbjct: 739 IFQR 742 >gi|67483974|ref|XP_657207.1| helicase [Entamoeba histolytica HM-1:IMSS] gi|56474451|gb|EAL51818.1| helicase, putative [Entamoeba histolytica HM-1:IMSS] Length = 955 Score = 37.7 bits (86), Expect = 1.1, Method: Compositional matrix adjust. Identities = 26/104 (25%), Positives = 50/104 (48%), Gaps = 8/104 (7%) Query: 101 IQEWNE--GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQ 158 I+++N+ GK+ + S G G+NLQ ++++ S W + Q M R + Sbjct: 466 IKDFNDPNGKVSIFLLSTRSGGLGINLQSADTVILYDSDWNPQSDIQAM------DRAHR 519 Query: 159 AGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKET 202 G + V VY LI + T ++ +++ K + L++ + K T Sbjct: 520 IGQTKPVTVYRLICEGTAEQRLIRVAERKLMLNRLVMQSGKTAT 563 >gi|211997722|gb|ACJ14807.1| putative phage-associated helicase [Candidatus Hamiltonella defensa] Length = 69 Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust. Identities = 19/47 (40%), Positives = 29/47 (61%) Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 R + G R VF+++L+ ++ID VL+ L K Q LL+ALKK+ Sbjct: 4 RLHRQGQTRPVFIHHLVMNDSIDITVLEALENKHITQKALLDALKKD 50 >gi|211997714|gb|ACJ14802.1| putative phage-associated helicase [Candidatus Hamiltonella defensa] gi|211997717|gb|ACJ14804.1| putative phage-associated helicase [Candidatus Hamiltonella defensa] Length = 69 Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust. Identities = 19/47 (40%), Positives = 29/47 (61%) Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 R + G R VF+++L+ ++ID VL+ L K Q LL+ALKK+ Sbjct: 4 RLHRQGQTRPVFIHHLVMNDSIDLTVLEALENKHITQKALLDALKKD 50 >gi|296111469|ref|YP_003621851.1| helicase, SNF2 family [Leuconostoc kimchii IMSNU 11154] gi|295833001|gb|ADG40882.1| helicase, SNF2 family [Leuconostoc kimchii IMSNU 11154] Length = 616 Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust. Identities = 27/112 (24%), Positives = 55/112 (49%), Gaps = 18/112 (16%) Query: 101 IQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLE---EHQQMIERIGVTRQR 157 I + +G +P+L ++PA+ G ++L + V+F ++L + + I R+G+ + Sbjct: 497 INNFRDGNVPVLISNPATLGESISLHQTVHDAVYFEYNFNLTFMLQSRDRIHRLGLPDNQ 556 Query: 158 QAGFKRAVFVYYLIAQNT------IDELVLQRLRTKSTIQDLLLNALKKETI 203 + YYL+ + ID+ V +RL+ K I +LNA+ + + Sbjct: 557 YTRY------YYLMTEGDHAHNGYIDQQVYERLKEKEII---MLNAIDGDML 599 >gi|170594229|ref|XP_001901866.1| BRM protein [Brugia malayi] gi|158590810|gb|EDP29425.1| BRM protein, putative [Brugia malayi] Length = 1412 Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust. Identities = 26/82 (31%), Positives = 40/82 (48%), Gaps = 6/82 (7%) Query: 118 SCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 + G GLNLQ +++F S W HQ M + R + G R V V L+ N+I+ Sbjct: 981 AGGLGLNLQTADTVIIFDSDW---NPHQDMQAQ---DRAHRIGQSREVRVLRLVTVNSIE 1034 Query: 178 ELVLQRLRTKSTIQDLLLNALK 199 E +L R K + + ++ A K Sbjct: 1035 EKILAAARYKLNVDEKVIQAGK 1056 >gi|308475524|ref|XP_003099980.1| hypothetical protein CRE_20884 [Caenorhabditis remanei] gi|308266032|gb|EFP09985.1| hypothetical protein CRE_20884 [Caenorhabditis remanei] Length = 1429 Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust. Identities = 27/89 (30%), Positives = 42/89 (47%), Gaps = 6/89 (6%) Query: 111 LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYL 170 L + G GLNLQ +++F S W HQ M + R + G K+ V V L Sbjct: 875 LFMLSTRAGGLGLNLQTADTVIIFDSDW---NPHQDMQAQ---DRAHRIGQKKEVRVLRL 928 Query: 171 IAQNTIDELVLQRLRTKSTIQDLLLNALK 199 I N+++E +L R K + + ++ A K Sbjct: 929 ITANSVEEKMLAVARYKLNVDEKVIQAGK 957 >gi|268553029|ref|XP_002634497.1| Hypothetical protein CBG08287 [Caenorhabditis briggsae] Length = 1480 Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust. Identities = 26/82 (31%), Positives = 41/82 (50%), Gaps = 6/82 (7%) Query: 118 SCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 + G GLNLQ +++F S W HQ M + R + G K+ V V LI N+++ Sbjct: 926 AGGLGLNLQTADTVIIFDSDW---NPHQDMQAQ---DRAHRIGQKKEVRVLRLITANSVE 979 Query: 178 ELVLQRLRTKSTIQDLLLNALK 199 E +L R K + + ++ A K Sbjct: 980 EKMLAVARYKLNVDEKVIQAGK 1001 >gi|326431585|gb|EGD77155.1| CHD1 protein [Salpingoeca sp. ATCC 50818] Length = 1497 Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust. Identities = 26/99 (26%), Positives = 49/99 (49%), Gaps = 8/99 (8%) Query: 101 IQEWN--EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQ 158 ++E+N + +I + + G GLNLQ +++F S W HQ + R + Sbjct: 855 VKEFNSPDSQIDVFVLSTRAGGLGLNLQTADTVIIFDSDW---NPHQDL---QAQDRAHR 908 Query: 159 AGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 G K V V+ L + N+++E +L+ R K + + ++ A Sbjct: 909 IGQKNEVRVFRLCSINSVEETILEAARFKLNVDEKVIQA 947 >gi|294659015|ref|XP_002770883.1| DEHA2F23188p [Debaryomyces hansenii CBS767] gi|218511864|sp|Q6BKC2|SWR1_DEBHA RecName: Full=Helicase SWR1 gi|202953552|emb|CAR66400.1| DEHA2F23188p [Debaryomyces hansenii] Length = 1616 Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust. Identities = 21/90 (23%), Positives = 45/90 (50%), Gaps = 6/90 (6%) Query: 106 EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 + KIP+ S G G+NL G + ++F+ W+ +Q +R + G R V Sbjct: 1397 DSKIPVFILSTRSGGLGINLT-GADTVIFYDSDWNPAMDKQCQDRC-----HRIGQSRDV 1450 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 +Y +++ TI+ +L++ K + ++++ Sbjct: 1451 HIYRFVSEYTIESNILRKANQKRQLDNVVI 1480 >gi|161528234|ref|YP_001582060.1| SNF2-related protein [Nitrosopumilus maritimus SCM1] gi|160339535|gb|ABX12622.1| SNF2-related protein [Nitrosopumilus maritimus SCM1] Length = 574 Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust. Identities = 30/99 (30%), Positives = 47/99 (47%), Gaps = 8/99 (8%) Query: 90 QGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIE 149 Q TL +D I ++ +G+ L+ A + G+NL + +F L W H+Q + Sbjct: 450 QSDTLRQD--QIDKFQKGESKLMIAGIRAGNVGINLTRAKYV-IFAELDWSPAIHRQAED 506 Query: 150 RIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKS 188 R+ + G + VF YYLI T+D+ V L KS Sbjct: 507 RL-----HRIGQQNTVFAYYLIGNGTLDDHVANVLVDKS 540 >gi|309362352|emb|CAP28139.2| hypothetical protein CBG_08287 [Caenorhabditis briggsae AF16] Length = 1512 Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust. Identities = 26/82 (31%), Positives = 41/82 (50%), Gaps = 6/82 (7%) Query: 118 SCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 + G GLNLQ +++F S W HQ M + R + G K+ V V LI N+++ Sbjct: 926 AGGLGLNLQTADTVIIFDSDW---NPHQDMQAQ---DRAHRIGQKKEVRVLRLITANSVE 979 Query: 178 ELVLQRLRTKSTIQDLLLNALK 199 E +L R K + + ++ A K Sbjct: 980 EKMLAVARYKLNVDEKVIQAGK 1001 >gi|254519060|ref|ZP_05131116.1| helicase [Clostridium sp. 7_2_43FAA] gi|226912809|gb|EEH98010.1| helicase [Clostridium sp. 7_2_43FAA] Length = 1084 Score = 37.4 bits (85), Expect = 1.1, Method: Composition-based stats. Identities = 36/138 (26%), Positives = 59/138 (42%), Gaps = 18/138 (13%) Query: 44 EEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQE 103 EE H V + L+ I K + I+ +Y L + P + L+ + E Sbjct: 927 EEGHKILVFSQFTSVLKNIASKLRSEHILFSY--------LDGSIPSEKRLE----LVNE 974 Query: 104 WNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKR 163 +NEG + + G GLNL +I++ F WW+ +E R + G Sbjct: 975 FNEGINSVFLISLKAGGTGLNLT-SADIVIHFDPWWN-----PAVEDQATDRAHRFGQTN 1028 Query: 164 AVFVYYLIAQNTIDELVL 181 V V LIA+N+I+E ++ Sbjct: 1029 IVEVIKLIARNSIEEKII 1046 >gi|255713990|ref|XP_002553277.1| KLTH0D13046p [Lachancea thermotolerans] gi|238934657|emb|CAR22839.1| KLTH0D13046p [Lachancea thermotolerans] Length = 1540 Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust. Identities = 24/82 (29%), Positives = 41/82 (50%), Gaps = 6/82 (7%) Query: 118 SCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 + G GLNLQ +++F + W HQ + + R + G K V + LI +N+++ Sbjct: 1089 AGGLGLNLQTADTVIIFDTDW---NPHQDLQAQ---DRAHRIGQKNEVRILRLITENSVE 1142 Query: 178 ELVLQRLRTKSTIQDLLLNALK 199 E++L R K I ++ A K Sbjct: 1143 EVILDRAHKKLDIDGKVIQAGK 1164 >gi|190345390|gb|EDK37263.2| hypothetical protein PGUG_01361 [Meyerozyma guilliermondii ATCC 6260] Length = 1103 Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust. Identities = 44/191 (23%), Positives = 78/191 (40%), Gaps = 42/191 (21%) Query: 18 ENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHF 77 E F ++K KC++L N I K++ IIV F Sbjct: 914 EETNGFTPSTKIEKCIELVNQ-----------------------IRTKSSEEKIIVFSQF 950 Query: 78 NS--DLARL---QKAFPQGR-----TLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQY 127 + DL +L +K P R +LD TI+ + +G +L + GL L Sbjct: 951 TTLFDLMKLVLDKKGIPFLRYDGSMSLDARNNTIKNFYQGSTQVLLISLRAGNVGLTLTC 1010 Query: 128 GGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTK 187 ++++ W E Q M R + G +R VFV+ ++ +TI+ +++ + K Sbjct: 1011 ANHVILMDPFWNPFVEEQAM------DRAHRIGQQREVFVHRILLNDTIEGRIMELQKYK 1064 Query: 188 STIQDLLLNAL 198 ++++ NAL Sbjct: 1065 ---KEMVQNAL 1072 >gi|302786754|ref|XP_002975148.1| hypothetical protein SELMODRAFT_102849 [Selaginella moellendorffii] gi|300157307|gb|EFJ23933.1| hypothetical protein SELMODRAFT_102849 [Selaginella moellendorffii] Length = 1017 Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust. Identities = 27/99 (27%), Positives = 50/99 (50%), Gaps = 8/99 (8%) Query: 101 IQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQ 158 +Q +N P + + G GLNLQ +++F S W + QM ++ R + Sbjct: 704 LQMFNAEDSPYFMFLLSTRAGGLGLNLQTADTVIIFDSDW-----NPQMDQQ-AEDRAHR 757 Query: 159 AGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 G K+ V V+ L++ +I+E +L+R ++K I ++ A Sbjct: 758 IGQKKEVHVFVLVSVGSIEEEILERAKSKMGIDAKVIQA 796 >gi|251773066|gb|EES53622.1| DNA/RNA helicase, SNF2 family [Leptospirillum ferrodiazotrophum] Length = 824 Score = 37.4 bits (85), Expect = 1.2, Method: Composition-based stats. Identities = 30/111 (27%), Positives = 53/111 (47%), Gaps = 6/111 (5%) Query: 87 AFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 +F G D+ P ++ + E +F + GLNLQ+ ++LV L W+ +Q Sbjct: 569 SFHGGIPSDRRPALVERFREDPDCRVFLSTDAGSTGLNLQH-ASVLVNMDLPWNPAILEQ 627 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 I RI + G KR V + +A+ I+E +L L K ++ + +L+ Sbjct: 628 RIARI-----HRMGQKRPVQIVNFVAKGGIEEGMLGLLSFKQSLSEGILDG 673 >gi|149239807|ref|XP_001525779.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL YB-4239] gi|146449902|gb|EDK44158.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL YB-4239] Length = 1139 Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust. Identities = 27/97 (27%), Positives = 42/97 (43%), Gaps = 7/97 (7%) Query: 101 IQEWNEGK-IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQA 159 + E+N + I + S G G+NL G + L+ F W+ Q + RI + Sbjct: 889 VNEFNRNEEIHVFLLSSKSGGMGINL-VGASRLILFDNDWNPSTDLQSLSRI-----HRD 942 Query: 160 GFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 G + F+Y L IDE + QR KS + L+ Sbjct: 943 GQTKPCFIYRLFTAGCIDEKIFQRQLMKSKLSSKFLD 979 >gi|312071167|ref|XP_003138483.1| hypothetical protein LOAG_02898 [Loa loa] gi|307766356|gb|EFO25590.1| hypothetical protein LOAG_02898 [Loa loa] Length = 755 Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust. Identities = 27/100 (27%), Positives = 48/100 (48%), Gaps = 12/100 (12%) Query: 101 IQEWNEGK----IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 ++++N+ K + LL + CG LNL G N L+ F W+ Q + R+ Q Sbjct: 547 VEKFNDPKSVEYVFLLSSKAGGCG--LNL-IGANRLIMFDPDWNPANDDQAMARVWRDGQ 603 Query: 157 RQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 R + F+Y L+A +I+E + QR K + +++ Sbjct: 604 R-----KNCFIYRLLASGSIEEKMFQRQAHKKALSSCVID 638 >gi|239908234|ref|YP_002954975.1| putative helicase [Desulfovibrio magneticus RS-1] gi|239798100|dbj|BAH77089.1| putative helicase [Desulfovibrio magneticus RS-1] Length = 1075 Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust. Identities = 22/76 (28%), Positives = 37/76 (48%), Gaps = 6/76 (7%) Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 G GLNL + ++ + WW+ +E R + G R VF Y LI QNT++E Sbjct: 986 GTGLNLT-SADYVIHYDPWWN-----PAVENQATDRTHRIGQLRQVFSYKLICQNTVEEK 1039 Query: 180 VLQRLRTKSTIQDLLL 195 +L+ K + + ++ Sbjct: 1040 ILKLQEQKKDVAEAVI 1055 >gi|209882325|ref|XP_002142599.1| SNF2 family N-terminal domain-containing protein [Cryptosporidium muris RN66] gi|209558205|gb|EEA08250.1| SNF2 family N-terminal domain-containing protein [Cryptosporidium muris RN66] Length = 1866 Score = 37.4 bits (85), Expect = 1.2, Method: Composition-based stats. Identities = 24/86 (27%), Positives = 45/86 (52%), Gaps = 12/86 (13%) Query: 120 GHGLNLQYGGNILVFFSLWW---DLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTI 176 G G+NL ++++ S W DL+ + RIG T+Q Q +Y L+ +++I Sbjct: 944 GLGINLTTADTVIIYDSDWNPQNDLQAEARA-HRIGQTKQVQ--------IYRLVTKDSI 994 Query: 177 DELVLQRLRTKSTIQDLLLNALKKET 202 +E +L+R +TK + L++ L + Sbjct: 995 EENILERAKTKMVLDTLVVQGLNNTS 1020 >gi|294656433|ref|XP_002770263.1| DEHA2D05456p [Debaryomyces hansenii CBS767] gi|199431470|emb|CAR65619.1| DEHA2D05456p [Debaryomyces hansenii] Length = 838 Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust. Identities = 24/91 (26%), Positives = 42/91 (46%), Gaps = 6/91 (6%) Query: 106 EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 EG + + G G+NL G N L+ W+ QQ + R+ + G K+ Sbjct: 662 EGSEFIFLLSSKAGGCGINL-IGANRLILIDPDWNPASDQQALARVW-----RDGQKKDC 715 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 F+Y I+ TI+E + QR K ++ +++ Sbjct: 716 FIYRFISTGTIEEKIFQRQSMKLSLSSCVVD 746 >gi|302852393|ref|XP_002957717.1| hypothetical protein VOLCADRAFT_107785 [Volvox carteri f. nagariensis] gi|300257011|gb|EFJ41266.1| hypothetical protein VOLCADRAFT_107785 [Volvox carteri f. nagariensis] Length = 610 Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust. Identities = 28/73 (38%), Positives = 37/73 (50%), Gaps = 6/73 (8%) Query: 111 LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYL 170 LL + G GLN+ G N LV F W+ Q + R V RQ Q K+ V++Y L Sbjct: 340 LLLLSSKAGGVGLNI-IGANRLVLFDPDWNPANDLQAMAR--VWRQGQ---KKKVWIYRL 393 Query: 171 IAQNTIDELVLQR 183 + TI+E V QR Sbjct: 394 LTTGTIEEKVYQR 406 >gi|302791571|ref|XP_002977552.1| hypothetical protein SELMODRAFT_176282 [Selaginella moellendorffii] gi|300154922|gb|EFJ21556.1| hypothetical protein SELMODRAFT_176282 [Selaginella moellendorffii] Length = 1032 Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust. Identities = 27/99 (27%), Positives = 50/99 (50%), Gaps = 8/99 (8%) Query: 101 IQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQ 158 +Q +N P + + G GLNLQ +++F S W + QM ++ R + Sbjct: 704 LQMFNAEDSPYFMFLLSTRAGGLGLNLQTADTVIIFDSDW-----NPQM-DQQAEDRAHR 757 Query: 159 AGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 G K+ V V+ L++ +I+E +L+R ++K I ++ A Sbjct: 758 IGQKKEVHVFVLVSVGSIEEEILERAKSKMGIDAKVIQA 796 >gi|281211743|gb|EFA85905.1| SNF2-related domain-containing protein [Polysphondylium pallidum PN500] Length = 1675 Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust. Identities = 29/94 (30%), Positives = 45/94 (47%), Gaps = 18/94 (19%) Query: 101 IQEWNEGKIP----LLFAHPASCGHGLNLQYGGNILVFFSLW---WDLEEHQQMIERIGV 153 + EWN P +L H + G G+NLQ +++F S W DL+ Q R+G Sbjct: 1045 VVEWNRKDSPYFIFVLSTH--AGGLGMNLQTADTVIIFDSDWNPQMDLQ-AQDRCHRVGQ 1101 Query: 154 TRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTK 187 + V V+ LI+ +TI+E +L+R K Sbjct: 1102 VNR--------VNVFRLISASTIEERILERATDK 1127 >gi|255712323|ref|XP_002552444.1| KLTH0C05038p [Lachancea thermotolerans] gi|238933823|emb|CAR22006.1| KLTH0C05038p [Lachancea thermotolerans] Length = 894 Score = 37.4 bits (85), Expect = 1.2, Method: Composition-based stats. Identities = 29/85 (34%), Positives = 40/85 (47%), Gaps = 9/85 (10%) Query: 109 IPLLFA---HPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 +P LFA S G GLNL G + LV F W+ Q + RI + G +R Sbjct: 679 VPSLFAFLLSAKSGGVGLNL-IGASRLVLFDNDWNPAIDLQAMSRI-----HRDGQRRPC 732 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTI 190 F+Y L+ IDE + QR K ++ Sbjct: 733 FIYRLLTTGCIDEKIFQRQLMKISL 757 >gi|110004998|emb|CAK99329.1| hypothetical dna/rna helicase protein [Spiroplasma citri] Length = 1098 Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust. Identities = 33/115 (28%), Positives = 53/115 (46%), Gaps = 8/115 (6%) Query: 84 LQKAFPQGRTLDKDPCTIQE-WNEGKIPLLFAHPASCGH-GLNLQYGGNILVFFSLWWDL 141 LQ + G+T + + E +NE KI +F G GLNL ++++ F WW+ Sbjct: 968 LQYFYLDGKTRSESRVLMTEKFNEDKIINVFLISLKAGGVGLNLT-AADVVIHFDPWWN- 1025 Query: 142 EEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 +E R + G + V V LIA+ TI+E +L K + + +LN Sbjct: 1026 ----PSVENQATDRAHRFGQQNTVQVIKLIAKGTIEEKILTIQNNKQEVINAVLN 1076 >gi|67609421|ref|XP_666977.1| chromodomain-helicase-DNA-binding protein, CHD-1-related [Cryptosporidium hominis TU502] gi|54658055|gb|EAL36743.1| chromodomain-helicase-DNA-binding protein, CHD-1-related [Cryptosporidium hominis] Length = 2025 Score = 37.4 bits (85), Expect = 1.2, Method: Composition-based stats. Identities = 21/79 (26%), Positives = 41/79 (51%), Gaps = 6/79 (7%) Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 G G+NL ++++ S W + Q R + G K+ V +Y L+ +++I+E Sbjct: 950 GLGINLTTADTVIIYDSDWNPQNDLQ------AEARAHRIGQKKQVQIYRLVTKDSIEEN 1003 Query: 180 VLQRLRTKSTIQDLLLNAL 198 +L+R +TK + L++ L Sbjct: 1004 ILERAKTKMVLDTLVVQGL 1022 >gi|281357099|ref|ZP_06243589.1| SNF2-related protein [Victivallis vadensis ATCC BAA-548] gi|281316657|gb|EFB00681.1| SNF2-related protein [Victivallis vadensis ATCC BAA-548] Length = 1041 Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust. Identities = 24/92 (26%), Positives = 43/92 (46%), Gaps = 6/92 (6%) Query: 105 NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA 164 N +IPL + G GLNL ++++ WW+ +E R + G RA Sbjct: 937 NSPEIPLFLLSLKAGGTGLNLTSADTVIIY-DPWWN-----PAVELQAADRTHRIGQTRA 990 Query: 165 VFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 V L+ +++I+E +L+ K I D +++ Sbjct: 991 VSSVKLVVKDSIEEKILELQERKREIFDSVID 1022 >gi|254444760|ref|ZP_05058236.1| SNF2 family N-terminal domain protein [Verrucomicrobiae bacterium DG1235] gi|198259068|gb|EDY83376.1| SNF2 family N-terminal domain protein [Verrucomicrobiae bacterium DG1235] Length = 831 Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust. Identities = 38/168 (22%), Positives = 69/168 (41%), Gaps = 22/168 (13%) Query: 48 WKEVHDEKIKALEVIIEK-----ANAAPIIVAYHFNSDLAR----LQKAFPQ-------G 91 W E E L V++EK +++ F L R ++++FP+ G Sbjct: 647 WMESSIEDSGKLMVLLEKLIEVLGTGHKVVIFSQFVRFLKRARIMVEESFPELPIFELTG 706 Query: 92 RTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERI 151 T D++ + N + + + G+ L + + + WW+ Q I+R+ Sbjct: 707 STHDREAPVREFQNTDQTAAMLVSLKAASVGITL-HTADYVFLLDPWWNPAVESQAIDRV 765 Query: 152 GVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 + G VFVY L+AQ TI+E + + K + D ++N K Sbjct: 766 -----HRIGQTNNVFVYRLLAQGTIEEKIHHLQKEKRDLFDSIVNDSK 808 >gi|211906285|gb|ACJ11660.1| putative phage-associated helicase [Candidatus Hamiltonella defensa] gi|211906292|gb|ACJ11664.1| putative phage-associated helicase [Candidatus Hamiltonella defensa] Length = 72 Score = 37.4 bits (85), Expect = 1.3, Method: Compositional matrix adjust. Identities = 19/47 (40%), Positives = 29/47 (61%) Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 R + G R VF+++L+ ++ID VL+ L K Q LL+ALKK+ Sbjct: 7 RLHRQGQTRPVFIHHLVMNDSIDLTVLEALENKHITQKALLDALKKD 53 >gi|308800202|ref|XP_003074882.1| Swr1 Swr1-Pie_related helicase (IC) [Ostreococcus tauri] gi|119358821|emb|CAL52149.3| Swr1 Swr1-Pie_related helicase (IC) [Ostreococcus tauri] Length = 1023 Score = 37.4 bits (85), Expect = 1.3, Method: Compositional matrix adjust. Identities = 23/78 (29%), Positives = 39/78 (50%), Gaps = 6/78 (7%) Query: 106 EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 + +I + S G G+NL G + ++F+ W+ QQ +R + G R V Sbjct: 857 DDRIFIFILSTRSGGFGINLT-GADTVIFYDSDWNPAMDQQAQDRC-----HRIGQTRDV 910 Query: 166 FVYYLIAQNTIDELVLQR 183 +Y LI + TI+E +LQ+ Sbjct: 911 HIYRLIGEGTIEESILQK 928 >gi|209877571|ref|XP_002140227.1| SNF2 family N-terminal domain-containing protein [Cryptosporidium muris RN66] gi|209555833|gb|EEA05878.1| SNF2 family N-terminal domain-containing protein [Cryptosporidium muris RN66] Length = 1100 Score = 37.4 bits (85), Expect = 1.3, Method: Compositional matrix adjust. Identities = 25/97 (25%), Positives = 47/97 (48%), Gaps = 9/97 (9%) Query: 93 TLDKDPCTIQEWNE--GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 T D+D I ++N+ I + + G G+NL ++++ S W ++ Sbjct: 542 TEDRD-TQISDFNKPNSDISIFLLSTRAGGLGVNLATADIVIIYDSDW------NPQVDL 594 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTK 187 + R + G K+ V++Y L +NTI+E +L+R K Sbjct: 595 QAMDRAHRIGQKKPVYIYRLFHENTIEEKILERANLK 631 >gi|119715910|ref|YP_922875.1| helicase domain-containing protein [Nocardioides sp. JS614] gi|119536571|gb|ABL81188.1| helicase domain protein [Nocardioides sp. JS614] Length = 723 Score = 37.4 bits (85), Expect = 1.3, Method: Composition-based stats. Identities = 25/97 (25%), Positives = 47/97 (48%), Gaps = 6/97 (6%) Query: 105 NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA 164 N+ ++ ++ + G G+NLQ N+ V L W E Q I+R+ + G + Sbjct: 603 NDPEVAVIVCSLTAAGVGVNLQVASNV-VLAELSWTDAEQTQAIDRV-----HRIGQEEP 656 Query: 165 VFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 V + +IA TID V + + +K+ + + L+ +E Sbjct: 657 VTAWRIIASQTIDTRVAELIDSKAGLAAVALDGSDEE 693 >gi|82595847|ref|XP_726017.1| nucleotide excision repair protein [Plasmodium yoelii yoelii str. 17XNL] gi|23481248|gb|EAA17582.1| similar nucleotide excision repair proteins-related [Plasmodium yoelii yoelii] Length = 818 Score = 37.4 bits (85), Expect = 1.3, Method: Composition-based stats. Identities = 23/88 (26%), Positives = 40/88 (45%), Gaps = 6/88 (6%) Query: 105 NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA 164 N+ ++ +L + G GLNLQ I + WW+ Q I+ R + G + Sbjct: 713 NDKQLRVLLISLKAGGEGLNLQVANRIFI-VDPWWNPAAELQAIQ-----RAHRIGQTKT 766 Query: 165 VFVYYLIAQNTIDELVLQRLRTKSTIQD 192 V+ I +NT++E ++Q K + D Sbjct: 767 VYAIRFIIENTVEEKIIQLQNKKQLVFD 794 >gi|224139702|ref|XP_002323235.1| chromatin remodeling complex subunit [Populus trichocarpa] gi|222867865|gb|EEF04996.1| chromatin remodeling complex subunit [Populus trichocarpa] Length = 398 Score = 37.4 bits (85), Expect = 1.3, Method: Compositional matrix adjust. Identities = 23/76 (30%), Positives = 37/76 (48%), Gaps = 6/76 (7%) Query: 107 GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVF 166 G +L A + G G+NL + + WW+ +Q I R+ Q G + V Sbjct: 295 GADTVLLASLKTSGTGINLTAASKVYLL-EPWWNSAVEEQAINRV-----HQYGQQENVR 348 Query: 167 VYYLIAQNTIDELVLQ 182 + LIAQN+I+E +L+ Sbjct: 349 IVRLIAQNSIEERILE 364 >gi|211906290|gb|ACJ11663.1| putative phage-associated helicase [Candidatus Hamiltonella defensa] Length = 72 Score = 37.4 bits (85), Expect = 1.3, Method: Compositional matrix adjust. Identities = 19/47 (40%), Positives = 29/47 (61%) Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 R + G R VF+++L+ ++ID VL+ L K Q LL+ALKK+ Sbjct: 7 RLHRQGQTRPVFIHHLVMNDSIDITVLEALENKHITQKALLDALKKD 53 >gi|310795289|gb|EFQ30750.1| SNF2 family domain-containing protein [Glomerella graminicola M1.001] Length = 903 Score = 37.4 bits (85), Expect = 1.3, Method: Compositional matrix adjust. Identities = 27/97 (27%), Positives = 42/97 (43%), Gaps = 15/97 (15%) Query: 94 LDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGV 153 LD DP T ++ A A C GLNL + ++ WW Q ++R+ Sbjct: 795 LDHDPDTR---------VMLASLAVCSVGLNL-VAADTVILADSWWAPAIEDQAVDRV-- 842 Query: 154 TRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 + G KR V+ L+ + T++E VL K T+ Sbjct: 843 ---HRLGQKRPTTVWRLVMEGTVEERVLDIQHEKRTL 876 >gi|259149765|emb|CAY86569.1| Snf2p [Saccharomyces cerevisiae EC1118] Length = 1706 Score = 37.4 bits (85), Expect = 1.3, Method: Compositional matrix adjust. Identities = 24/82 (29%), Positives = 41/82 (50%), Gaps = 6/82 (7%) Query: 118 SCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 + G GLNLQ +++F + W HQ + + R + G K V + LI N+++ Sbjct: 1168 AGGLGLNLQTADTVIIFDTDW---NPHQDLQAQ---DRAHRIGQKNEVRILRLITTNSVE 1221 Query: 178 ELVLQRLRTKSTIQDLLLNALK 199 E++L+R K I ++ A K Sbjct: 1222 EVILERAHKKLDIDGKVIQAGK 1243 >gi|58261298|ref|XP_568059.1| SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 3 [Cryptococcus neoformans var. neoformans JEC21] gi|57230141|gb|AAW46542.1| SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 3, putative [Cryptococcus neoformans var. neoformans JEC21] Length = 900 Score = 37.4 bits (85), Expect = 1.3, Method: Compositional matrix adjust. Identities = 22/60 (36%), Positives = 30/60 (50%), Gaps = 6/60 (10%) Query: 122 GLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVL 181 GLNL N+ WW Q IE + R + G K+ V V+ LIA++TI+ VL Sbjct: 807 GLNLTAASNVF-LCDPWW-----QSAIEAQAIDRAHRMGQKKVVRVFQLIAEDTIESRVL 860 >gi|67624313|ref|XP_668439.1| DNA repair protein RAD54-like [Cryptosporidium hominis TU502] gi|54659648|gb|EAL38216.1| DNA repair protein RAD54-like [Cryptosporidium hominis] Length = 877 Score = 37.4 bits (85), Expect = 1.3, Method: Composition-based stats. Identities = 27/98 (27%), Positives = 45/98 (45%), Gaps = 7/98 (7%) Query: 100 TIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQA 159 T + N L + A G G+NL G N LV F W+ +Q + R+ + Sbjct: 572 TFNDPNSNSFAFLLSSKAG-GCGINL-IGANRLVMFDPDWNPANDKQALARVW-----RD 624 Query: 160 GFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 G K+ ++Y L + TI+E + QR K + +L+ + Sbjct: 625 GQKKNCYIYRLFSTGTIEEKIYQRQLCKDGLSAMLVTS 662 >gi|66361996|ref|XP_627962.1| RAD54 like SWI/SNF2 ATpase [Cryptosporidium parvum Iowa II] gi|46227534|gb|EAK88469.1| RAD54 like SWI/SNF2 ATpase [Cryptosporidium parvum Iowa II] Length = 877 Score = 37.4 bits (85), Expect = 1.3, Method: Composition-based stats. Identities = 27/98 (27%), Positives = 45/98 (45%), Gaps = 7/98 (7%) Query: 100 TIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQA 159 T + N L + A G G+NL G N LV F W+ +Q + R+ + Sbjct: 572 TFNDPNSNSFAFLLSSKAG-GCGINL-IGANRLVMFDPDWNPANDKQALARVW-----RD 624 Query: 160 GFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 G K+ ++Y L + TI+E + QR K + +L+ + Sbjct: 625 GQKKNCYIYRLFSTGTIEEKIYQRQLCKDGLSAMLVTS 662 >gi|254583686|ref|XP_002497411.1| ZYRO0F04906p [Zygosaccharomyces rouxii] gi|238940304|emb|CAR28478.1| ZYRO0F04906p [Zygosaccharomyces rouxii] Length = 848 Score = 37.4 bits (85), Expect = 1.3, Method: Compositional matrix adjust. Identities = 24/92 (26%), Positives = 44/92 (47%), Gaps = 6/92 (6%) Query: 106 EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 EG+ + + G G+NL G N L+ W+ QQ + R+ + G K+ Sbjct: 672 EGQEFVFLLSSKAGGCGINL-IGANRLILLDPDWNPAADQQALARVW-----RDGQKKDC 725 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 F+Y I+ +I+E + QR K ++ +++A Sbjct: 726 FIYRFISTGSIEEKIYQRQSMKLSLSSCVVDA 757 >gi|145610651|ref|XP_368232.2| hypothetical protein MGG_01012 [Magnaporthe oryzae 70-15] gi|145018030|gb|EDK02309.1| hypothetical protein MGG_01012 [Magnaporthe oryzae 70-15] Length = 1111 Score = 37.4 bits (85), Expect = 1.3, Method: Compositional matrix adjust. Identities = 31/101 (30%), Positives = 47/101 (46%), Gaps = 12/101 (11%) Query: 99 CTIQEWNE-GKIPLLFAHPASCGH-GLNLQYGGNILVFFSLWWDLEEHQQM--IERIGVT 154 I E+N+ G +F G G+NL +++F S W + Q M RIG T Sbjct: 547 AAIDEYNKPGSEKFVFLLTTRAGGLGINLTTADIVILFDSDWNPQADLQAMDRAHRIGQT 606 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 +Q V+VY + NTI+E VL+R K + L++ Sbjct: 607 KQ--------VYVYRFLVDNTIEEKVLERAAQKLHLDRLVI 639 >gi|308493124|ref|XP_003108752.1| hypothetical protein CRE_11128 [Caenorhabditis remanei] gi|308248492|gb|EFO92444.1| hypothetical protein CRE_11128 [Caenorhabditis remanei] Length = 1496 Score = 37.4 bits (85), Expect = 1.3, Method: Compositional matrix adjust. Identities = 27/89 (30%), Positives = 41/89 (46%), Gaps = 6/89 (6%) Query: 111 LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYL 170 L + G GLNLQ +++F S W HQ M R + G K+ V V L Sbjct: 923 LFMLSTRAGGLGLNLQTADTVIIFDSDW---NPHQDM---QAQDRAHRIGQKKEVRVLRL 976 Query: 171 IAQNTIDELVLQRLRTKSTIQDLLLNALK 199 I N+++E +L R K + + ++ A K Sbjct: 977 ITANSVEEKMLAVARYKLNVDEKVIQAGK 1005 >gi|304438573|ref|ZP_07398512.1| Snf2 family protein [Selenomonas sp. oral taxon 149 str. 67H29BP] gi|304368411|gb|EFM22097.1| Snf2 family protein [Selenomonas sp. oral taxon 149 str. 67H29BP] Length = 819 Score = 37.4 bits (85), Expect = 1.3, Method: Compositional matrix adjust. Identities = 21/82 (25%), Positives = 40/82 (48%), Gaps = 6/82 (7%) Query: 101 IQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 I + + K + F + G GLNL ++ + WW+ +Q +RI + G Sbjct: 709 ISLFEQSKEGIFFISLKAGGVGLNLT-SAQFVIIYEPWWNPSAERQASDRI-----YRIG 762 Query: 161 FKRAVFVYYLIAQNTIDELVLQ 182 + VF+Y+ I +TI+E +++ Sbjct: 763 QDKPVFIYHFIVNDTIEEKIIE 784 >gi|26350683|dbj|BAC38978.1| unnamed protein product [Mus musculus] Length = 1069 Score = 37.4 bits (85), Expect = 1.3, Method: Compositional matrix adjust. Identities = 25/84 (29%), Positives = 40/84 (47%), Gaps = 6/84 (7%) Query: 118 SCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 + G GL ++ VF L+WD +Q +R RQ + V ++YLIA T+D Sbjct: 399 AAGQGLTFTAASHV-VFAELYWDPGHIKQAEDRAHRIRQCSS-----VNIHYLIANGTLD 452 Query: 178 ELVLQRLRTKSTIQDLLLNALKKE 201 L+ L K+ + LN K++ Sbjct: 453 SLMWAMLNRKAQVTGSTLNGRKEK 476 >gi|260943410|ref|XP_002616003.1| hypothetical protein CLUG_03244 [Clavispora lusitaniae ATCC 42720] gi|238849652|gb|EEQ39116.1| hypothetical protein CLUG_03244 [Clavispora lusitaniae ATCC 42720] Length = 879 Score = 37.4 bits (85), Expect = 1.4, Method: Composition-based stats. Identities = 28/107 (26%), Positives = 49/107 (45%), Gaps = 8/107 (7%) Query: 93 TLDKDPCTIQEWN--EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 T++K + +N EG + + G G+NL G N LV W+ QQ + R Sbjct: 688 TINKRQKIVDRFNDPEGNEFIFLLSSKAGGCGINL-IGANRLVLMDPDWNPAADQQALAR 746 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + + G K+ F+Y + TI+E + QR K ++ +++A Sbjct: 747 VW-----RDGQKKDCFIYRFMCTGTIEEKIFQRQSMKLSLSSCVVDA 788 >gi|170050421|ref|XP_001861304.1| helicase [Culex quinquefasciatus] gi|167872038|gb|EDS35421.1| helicase [Culex quinquefasciatus] Length = 1024 Score = 37.4 bits (85), Expect = 1.4, Method: Compositional matrix adjust. Identities = 28/97 (28%), Positives = 47/97 (48%), Gaps = 8/97 (8%) Query: 101 IQEWN-EGKIPLLFAHPASCGH-GLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQ 158 I E+N EG +F G G+NL ++++ S W + Q M R + Sbjct: 494 IDEYNAEGSQKFIFMLSTRAGGLGINLATADVVIIYDSDWNPQMDLQAM------DRAHR 547 Query: 159 AGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 G K+ V V+ LI +NTI+E +++R K + L++ Sbjct: 548 IGQKKQVRVFRLITENTIEEKIVERAEIKLKLDKLVI 584 >gi|83318941|emb|CAJ38808.1| Lodestar protein [Platynereis dumerilii] Length = 1244 Score = 37.4 bits (85), Expect = 1.4, Method: Composition-based stats. Identities = 23/78 (29%), Positives = 41/78 (52%), Gaps = 6/78 (7%) Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 G GLNL GGN L+ L W+ Q +RI + G K+ VF++ + +NT++E Sbjct: 1120 GVGLNL-IGGNHLIMVDLHWNPALEAQACDRI-----YRVGQKKDVFIHRFVCKNTVEEK 1173 Query: 180 VLQRLRTKSTIQDLLLNA 197 + ++K + + +L+ Sbjct: 1174 IQMLQKSKMALAENILSG 1191 >gi|134115669|ref|XP_773548.1| hypothetical protein CNBI1620 [Cryptococcus neoformans var. neoformans B-3501A] gi|50256174|gb|EAL18901.1| hypothetical protein CNBI1620 [Cryptococcus neoformans var. neoformans B-3501A] Length = 899 Score = 37.4 bits (85), Expect = 1.4, Method: Compositional matrix adjust. Identities = 22/60 (36%), Positives = 30/60 (50%), Gaps = 6/60 (10%) Query: 122 GLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVL 181 GLNL N+ WW Q IE + R + G K+ V V+ LIA++TI+ VL Sbjct: 806 GLNLTAASNVF-LCDPWW-----QSAIEAQAIDRAHRMGQKKVVRVFQLIAEDTIESRVL 859 >gi|322694613|gb|EFY86438.1| SNF2 family helicase/ATPase, putative [Metarhizium acridum CQMa 102] Length = 1027 Score = 37.4 bits (85), Expect = 1.4, Method: Composition-based stats. Identities = 30/105 (28%), Positives = 49/105 (46%), Gaps = 7/105 (6%) Query: 101 IQEWNE-GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQA 159 I E+NE IP+ + G G+NL +++F DL ++ Q + R + Sbjct: 907 IDEFNEDASIPVFLLTTGAGGTGINLTAANKVIIF-----DLSDNPQD-DIQAENRAHRL 960 Query: 160 GFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIH 204 G KR V V LIA +I+EL+ + + K + + + A E H Sbjct: 961 GQKRDVEVIRLIASQSIEELIYKACQKKIELANKVTGAGALEDTH 1005 >gi|313228968|emb|CBY18120.1| unnamed protein product [Oikopleura dioica] Length = 996 Score = 37.4 bits (85), Expect = 1.4, Method: Compositional matrix adjust. Identities = 20/87 (22%), Positives = 41/87 (47%), Gaps = 6/87 (6%) Query: 111 LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYL 170 L + G G+NL ++++ S W + Q M R + G K+ V+VY + Sbjct: 498 LFMLSTKAGGLGINLMTANVVIIYDSDWNPQNDLQAM------DRAHRIGQKKQVYVYRM 551 Query: 171 IAQNTIDELVLQRLRTKSTIQDLLLNA 197 I ++DE +++R K + +++ + Sbjct: 552 ITDESVDERIIERSELKMRLDSVVIQS 578 >gi|134118954|ref|XP_771980.1| hypothetical protein CNBN1600 [Cryptococcus neoformans var. neoformans B-3501A] gi|50254584|gb|EAL17333.1| hypothetical protein CNBN1600 [Cryptococcus neoformans var. neoformans B-3501A] Length = 1060 Score = 37.4 bits (85), Expect = 1.4, Method: Compositional matrix adjust. Identities = 22/64 (34%), Positives = 30/64 (46%), Gaps = 13/64 (20%) Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 G GLNL +++F W + R + G KR V VY LI Q TI+EL Sbjct: 743 GVGLNLTAANKVVIFDPSWT-------------MDRAFRIGQKRTVEVYRLIGQGTIEEL 789 Query: 180 VLQR 183 + +R Sbjct: 790 IYER 793 >gi|296134095|ref|YP_003641342.1| helicase domain protein [Thermincola sp. JR] gi|296032673|gb|ADG83441.1| helicase domain protein [Thermincola potens JR] Length = 469 Score = 37.4 bits (85), Expect = 1.4, Method: Compositional matrix adjust. Identities = 34/116 (29%), Positives = 50/116 (43%), Gaps = 25/116 (21%) Query: 76 HFNSDLARLQKAFPQGRTLDKD----PCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNI 131 HFN L R QK + + +KD CT S GLN Q+ N+ Sbjct: 341 HFNGKLKRNQKEYTKWLFQNKDYRVMICT----------------DSGSQGLNFQFC-NV 383 Query: 132 LVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTK 187 +V F L W+ + +Q I RI R V+VY + Q+T++E + L +K Sbjct: 384 IVNFDLPWNPMKVEQRIGRI----DRLGQTADEVYVYNFVLQDTVEEKIFHILSSK 435 >gi|255037622|ref|YP_003088243.1| Non-specific serine/threonine protein kinase [Dyadobacter fermentans DSM 18053] gi|254950378|gb|ACT95078.1| Non-specific serine/threonine protein kinase [Dyadobacter fermentans DSM 18053] Length = 1261 Score = 37.4 bits (85), Expect = 1.4, Method: Compositional matrix adjust. Identities = 27/105 (25%), Positives = 50/105 (47%), Gaps = 7/105 (6%) Query: 91 GRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 G+T+D+ + N+ + + G GLNL + + WW+ +ER Sbjct: 1143 GQTVDRAGRVNRFQNDDTCRVFLMSLKAGGVGLNLT-EADYVYLVDPWWN-----PAVER 1196 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDE-LVLQRLRTKSTIQDLL 194 + R + G R VF Y +I ++TI+E ++L + R + +DL+ Sbjct: 1197 QAIDRTHRIGQTRKVFAYKMICKDTIEEKILLLQQRKQDLAEDLV 1241 >gi|193084056|gb|ACF09729.1| helicase SNF2/RAD54 family [uncultured marine crenarchaeote KM3-86-C1] Length = 569 Score = 37.4 bits (85), Expect = 1.4, Method: Compositional matrix adjust. Identities = 28/96 (29%), Positives = 43/96 (44%), Gaps = 6/96 (6%) Query: 101 IQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 I + G L+ + G+NL ++F L W H+Q +R+ + G Sbjct: 454 IDNFQNGGTKLIIVGLRAGNLGINLTRA-KYVIFAELDWSPAIHRQAEDRL-----HRIG 507 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 K VF YYLI + T+DE V L KS D +++ Sbjct: 508 QKNTVFAYYLIGKRTLDEHVANILVDKSYEIDAIMD 543 >gi|296415159|ref|XP_002837259.1| hypothetical protein [Tuber melanosporum Mel28] gi|295633120|emb|CAZ81450.1| unnamed protein product [Tuber melanosporum] Length = 1362 Score = 37.4 bits (85), Expect = 1.4, Method: Compositional matrix adjust. Identities = 28/107 (26%), Positives = 49/107 (45%), Gaps = 8/107 (7%) Query: 95 DKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIG 152 D ++E+N P + + G GLNLQ ++++ S W HQ + + Sbjct: 851 DDRSALLKEFNAPDSPYFIFLLSTRAGGLGLNLQTADTVIIYDSDW---NPHQDLQAQ-- 905 Query: 153 VTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 R + G K V + LI N+++E +L+R + K I ++ A K Sbjct: 906 -DRAHRIGQKNEVRILRLITSNSVEERILERAQYKLDIDGKVIQAGK 951 >gi|190344615|gb|EDK36323.2| hypothetical protein PGUG_00421 [Meyerozyma guilliermondii ATCC 6260] Length = 497 Score = 37.4 bits (85), Expect = 1.4, Method: Compositional matrix adjust. Identities = 24/103 (23%), Positives = 49/103 (47%), Gaps = 15/103 (14%) Query: 93 TLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIG 152 T ++DP KIP+ S G G+NL G + ++F+ W+ +Q +R Sbjct: 281 TFNRDP---------KIPVFILSTRSGGLGINLT-GADTVIFYDSDWNPAMDKQCQDRC- 329 Query: 153 VTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 + G R V +Y +++ TI+ +L++ K + ++++ Sbjct: 330 ----HRIGQSRDVHIYRFVSEYTIESNILKKANQKRHLDNVVI 368 >gi|170580649|ref|XP_001895355.1| recombination factor GdRad54 [Brugia malayi] gi|158597754|gb|EDP35808.1| recombination factor GdRad54, putative [Brugia malayi] Length = 865 Score = 37.4 bits (85), Expect = 1.4, Method: Compositional matrix adjust. Identities = 23/85 (27%), Positives = 40/85 (47%), Gaps = 6/85 (7%) Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 G GLNL G N L+ F W+ Q + R+ + G K+ F+Y L++ +I+E Sbjct: 678 GCGLNL-IGANRLIMFDPDWNPANDDQAMARVW-----RDGQKKNCFIYRLLSTGSIEEK 731 Query: 180 VLQRLRTKSTIQDLLLNALKKETIH 204 + QR K + +++ + H Sbjct: 732 MFQRQAHKKALSSCVVDEISDVARH 756 >gi|296186183|ref|ZP_06854588.1| SNF2 family [Clostridium carboxidivorans P7] gi|296049451|gb|EFG88880.1| SNF2 family [Clostridium carboxidivorans P7] Length = 1034 Score = 37.0 bits (84), Expect = 1.4, Method: Composition-based stats. Identities = 28/105 (26%), Positives = 49/105 (46%), Gaps = 8/105 (7%) Query: 101 IQEWNE-GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQA 159 + E+N K+ + + G GLNL N+++ F WW+ +E R + Sbjct: 920 VNEFNSCTKVKVFLISLKAGGTGLNLT-SANLVIHFDPWWN-----PAVEDQATDRAHRI 973 Query: 160 GFKRAVFVYYLIAQNTIDE-LVLQRLRTKSTIQDLLLNALKKETI 203 G K V V L+A+ TI+E ++L + K I +++ LK + Sbjct: 974 GQKNVVEVIKLVARGTIEEKIILLQEHKKELIHNIITGELKNSNV 1018 >gi|160880712|ref|YP_001559680.1| non-specific serine/threonine protein kinase [Clostridium phytofermentans ISDg] gi|160429378|gb|ABX42941.1| Non-specific serine/threonine protein kinase [Clostridium phytofermentans ISDg] Length = 1069 Score = 37.0 bits (84), Expect = 1.4, Method: Compositional matrix adjust. Identities = 27/110 (24%), Positives = 52/110 (47%), Gaps = 13/110 (11%) Query: 101 IQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 ++ +N G+ + + G GLNL G + ++ + WW+ +Q +R+ + G Sbjct: 961 VKRFNAGEGSIFLISLKAGGTGLNL-VGADTVIHYDPWWNPAVEEQATDRV-----YRIG 1014 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTIQD-------LLLNALKKETI 203 K V V L+ +NTI+E + + + K + D + +N L KE + Sbjct: 1015 QKNNVHVIKLLTKNTIEEKIFKLQKKKKELSDSIIQSKEVFINTLSKEEL 1064 >gi|227875351|ref|ZP_03993493.1| SNF2 family superfamily II DNA/RNA helicase [Mobiluncus mulieris ATCC 35243] gi|227844256|gb|EEJ54423.1| SNF2 family superfamily II DNA/RNA helicase [Mobiluncus mulieris ATCC 35243] Length = 966 Score = 37.0 bits (84), Expect = 1.4, Method: Composition-based stats. Identities = 26/78 (33%), Positives = 38/78 (48%), Gaps = 6/78 (7%) Query: 118 SCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 S G GLNL + + WW+ + Q I+R + G R V VY L+A+NTI+ Sbjct: 873 SGGFGLNLT-AADYVFLCDPWWNPQVESQAIDR-----AHRIGQTRPVNVYRLVAKNTIE 926 Query: 178 ELVLQRLRTKSTIQDLLL 195 + VL K + D +L Sbjct: 927 QRVLAMQAQKRELFDQVL 944 >gi|226355788|ref|YP_002785528.1| DNA helicase, SNF2/RAD54 protein family [Deinococcus deserti VCD115] gi|226317778|gb|ACO45774.1| putative DNA helicase, SNF2/RAD54 protein family [Deinococcus deserti VCD115] Length = 1132 Score = 37.0 bits (84), Expect = 1.4, Method: Composition-based stats. Identities = 26/107 (24%), Positives = 49/107 (45%), Gaps = 7/107 (6%) Query: 91 GRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 G+T D+ I + G+ + + G GLNL + ++ + WW+ Q +R Sbjct: 994 GQTQDRQ-TQIDRFQNGETHVFLITLKAGGVGLNLT-AADTVIHYDPWWNPAAEDQATDR 1051 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + G + VFVY LIA +++E +L K+++ +L+ Sbjct: 1052 -----AYRIGQDKPVFVYKLIAAGSVEERILDLQSRKASLARGILDG 1093 >gi|47216738|emb|CAG01012.1| unnamed protein product [Tetraodon nigroviridis] Length = 381 Score = 37.0 bits (84), Expect = 1.4, Method: Compositional matrix adjust. Identities = 24/86 (27%), Positives = 41/86 (47%), Gaps = 12/86 (13%) Query: 118 SCGHGLNLQYGGNILVFFSLWWD---LEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQN 174 + G GL ++ VF L+W+ +++ + RIG T ++ V+YLIA+ Sbjct: 67 AAGQGLTFTAASHV-VFAELYWNPGHIKQAEDRAHRIGQTS--------SINVHYLIAKG 117 Query: 175 TIDELVLQRLRTKSTIQDLLLNALKK 200 T D ++ L K T+ LN K+ Sbjct: 118 TFDTVMWSMLNRKETVTGTTLNGKKE 143 >gi|269976365|ref|ZP_06183357.1| helicase/SNF2 family domain-containing protein [Mobiluncus mulieris 28-1] gi|269935436|gb|EEZ91978.1| helicase/SNF2 family domain-containing protein [Mobiluncus mulieris 28-1] Length = 970 Score = 37.0 bits (84), Expect = 1.4, Method: Composition-based stats. Identities = 26/78 (33%), Positives = 38/78 (48%), Gaps = 6/78 (7%) Query: 118 SCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 S G GLNL + + WW+ + Q I+R + G R V VY L+A+NTI+ Sbjct: 877 SGGFGLNLT-AADYVFLCDPWWNPQVESQAIDR-----AHRIGQTRPVNVYRLVAKNTIE 930 Query: 178 ELVLQRLRTKSTIQDLLL 195 + VL K + D +L Sbjct: 931 QRVLAMQAQKRELFDQVL 948 >gi|255523219|ref|ZP_05390190.1| Non-specific serine/threonine protein kinase [Clostridium carboxidivorans P7] gi|255513087|gb|EET89356.1| Non-specific serine/threonine protein kinase [Clostridium carboxidivorans P7] Length = 1005 Score = 37.0 bits (84), Expect = 1.4, Method: Composition-based stats. Identities = 28/105 (26%), Positives = 49/105 (46%), Gaps = 8/105 (7%) Query: 101 IQEWNE-GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQA 159 + E+N K+ + + G GLNL N+++ F WW+ +E R + Sbjct: 891 VNEFNSCTKVKVFLISLKAGGTGLNLT-SANLVIHFDPWWN-----PAVEDQATDRAHRI 944 Query: 160 GFKRAVFVYYLIAQNTIDE-LVLQRLRTKSTIQDLLLNALKKETI 203 G K V V L+A+ TI+E ++L + K I +++ LK + Sbjct: 945 GQKNVVEVIKLVARGTIEEKIILLQEHKKELIHNIITGELKNSNV 989 >gi|295319060|gb|ADF99437.1| helicase, SNF2/RAD54 family [Clostridium botulinum F str. 230613] Length = 1050 Score = 37.0 bits (84), Expect = 1.5, Method: Composition-based stats. Identities = 24/82 (29%), Positives = 41/82 (50%), Gaps = 6/82 (7%) Query: 101 IQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 ++++N GK + + G GLNL +I++ F WW+ +E R + G Sbjct: 965 VKDFNNGKGDIFLISLKAGGTGLNLT-SADIVIHFDPWWN-----PAVEDQASDRAHRIG 1018 Query: 161 FKRAVFVYYLIAQNTIDELVLQ 182 K+ V V LIA+ TI+E + + Sbjct: 1019 QKKTVEVIRLIAKGTIEEKIYK 1040 >gi|209945932|gb|ACI97197.1| okra [Drosophila yakuba] Length = 168 Score = 37.0 bits (84), Expect = 1.5, Method: Compositional matrix adjust. Identities = 22/73 (30%), Positives = 36/73 (49%), Gaps = 6/73 (8%) Query: 111 LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYL 170 L + G GLNL G N L F W+ +Q + R+ + G K+ ++Y + Sbjct: 97 LFMLSSKAGGCGLNL-IGANRLFMFDPDWNPANDEQAMARVW-----RDGQKKPCYIYRM 150 Query: 171 IAQNTIDELVLQR 183 +A +I+E +LQR Sbjct: 151 VASGSIEEKILQR 163 >gi|168050295|ref|XP_001777595.1| SNF2 family DNA-dependent ATPase [Physcomitrella patens subsp. patens] gi|162671080|gb|EDQ57638.1| SNF2 family DNA-dependent ATPase [Physcomitrella patens subsp. patens] Length = 775 Score = 37.0 bits (84), Expect = 1.5, Method: Compositional matrix adjust. Identities = 21/79 (26%), Positives = 39/79 (49%), Gaps = 6/79 (7%) Query: 118 SCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 SCG G+NL ++++ S D H + + R + G + + VY L+ + +++ Sbjct: 621 SCGLGINLATADTVIIYDS---DFNPHADIQ---AMNRAHRIGQSKTLLVYRLVVRASVE 674 Query: 178 ELVLQRLRTKSTIQDLLLN 196 E +LQ R K ++ L N Sbjct: 675 ERILQLARKKLMLEYLFAN 693 >gi|325274896|ref|ZP_08140906.1| DNA helicase [Pseudomonas sp. TJI-51] gi|324099980|gb|EGB97816.1| DNA helicase [Pseudomonas sp. TJI-51] Length = 659 Score = 37.0 bits (84), Expect = 1.5, Method: Compositional matrix adjust. Identities = 41/137 (29%), Positives = 59/137 (43%), Gaps = 19/137 (13%) Query: 64 EKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGL 123 E A A V + ++ R QKA T DP + + + G GL Sbjct: 524 EFAKAGIQTVTFTGSNSGTRKQKAID---TFMSDPA---------VKVFIGTTKAAGVGL 571 Query: 124 NLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQR 183 NL N + F SL W +Q +R + G KRAV V + TIDE V+ Sbjct: 572 NL-VAANYVFFASLPWTAAAKRQAEDR-----AYRNGQKRAVTVLMPVISGTIDEQVVLL 625 Query: 184 LRTKSTI-QDLLLNALK 199 L+ K +I QDLL ++++ Sbjct: 626 LQHKESIEQDLLDDSVQ 642 >gi|307700797|ref|ZP_07637822.1| SNF2 family N-terminal domain protein [Mobiluncus mulieris FB024-16] gi|307613792|gb|EFN93036.1| SNF2 family N-terminal domain protein [Mobiluncus mulieris FB024-16] Length = 970 Score = 37.0 bits (84), Expect = 1.5, Method: Composition-based stats. Identities = 26/78 (33%), Positives = 38/78 (48%), Gaps = 6/78 (7%) Query: 118 SCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 S G GLNL + + WW+ + Q I+R + G R V VY L+A+NTI+ Sbjct: 877 SGGFGLNLT-AADYVFLCDPWWNPQVESQAIDR-----AHRIGQTRPVNVYRLVAKNTIE 930 Query: 178 ELVLQRLRTKSTIQDLLL 195 + VL K + D +L Sbjct: 931 QRVLAMQAQKRELFDQVL 948 >gi|306818666|ref|ZP_07452388.1| SNF2 family protein [Mobiluncus mulieris ATCC 35239] gi|304648352|gb|EFM45655.1| SNF2 family protein [Mobiluncus mulieris ATCC 35239] Length = 970 Score = 37.0 bits (84), Expect = 1.5, Method: Composition-based stats. Identities = 26/78 (33%), Positives = 38/78 (48%), Gaps = 6/78 (7%) Query: 118 SCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 S G GLNL + + WW+ + Q I+R + G R V VY L+A+NTI+ Sbjct: 877 SGGFGLNLT-AADYVFLCDPWWNPQVESQAIDR-----AHRIGQTRPVNVYRLVAKNTIE 930 Query: 178 ELVLQRLRTKSTIQDLLL 195 + VL K + D +L Sbjct: 931 QRVLAMQAQKRELFDQVL 948 >gi|213406015|ref|XP_002173779.1| SNF2 family helicase Swr1 [Schizosaccharomyces japonicus yFS275] gi|212001826|gb|EEB07486.1| SNF2 family helicase Swr1 [Schizosaccharomyces japonicus yFS275] Length = 1276 Score = 37.0 bits (84), Expect = 1.5, Method: Compositional matrix adjust. Identities = 24/91 (26%), Positives = 45/91 (49%), Gaps = 12/91 (13%) Query: 108 KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLE---EHQQMIERIGVTRQRQAGFKRA 164 +IP+ S G G+NL G + ++F+ W+ + + Q RIG TR Sbjct: 1063 RIPVFILSTRSGGLGINLT-GADTVIFYDSDWNPQLDAQAQDRSHRIGQTRD-------- 1113 Query: 165 VFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 V +Y LI++ T++ +L+R K + +++ Sbjct: 1114 VHIYRLISEYTVESNMLKRANQKRMLDKIVI 1144 >gi|237795092|ref|YP_002862644.1| helicase, SNF2/RAD54 family [Clostridium botulinum Ba4 str. 657] gi|229260925|gb|ACQ51958.1| helicase, SNF2/RAD54 family [Clostridium botulinum Ba4 str. 657] Length = 1077 Score = 37.0 bits (84), Expect = 1.5, Method: Composition-based stats. Identities = 24/78 (30%), Positives = 39/78 (50%), Gaps = 6/78 (7%) Query: 101 IQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 ++++N GK + + G GLNL +I++ F WW+ +E R + G Sbjct: 965 VKDFNNGKGDIFLISLKAGGTGLNLT-SADIVIHFDPWWN-----PAVEDQASDRAHRIG 1018 Query: 161 FKRAVFVYYLIAQNTIDE 178 K+ V V LIA+ TI+E Sbjct: 1019 QKKTVEVIRLIAKGTIEE 1036 >gi|68073367|ref|XP_678598.1| DNA repair protein rhp16 [Plasmodium berghei strain ANKA] gi|56499117|emb|CAH97553.1| DNA repair protein rhp16, putative [Plasmodium berghei] Length = 1545 Score = 37.0 bits (84), Expect = 1.5, Method: Composition-based stats. Identities = 23/88 (26%), Positives = 40/88 (45%), Gaps = 6/88 (6%) Query: 105 NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA 164 N+ ++ +L + G GLNLQ I + WW+ Q I+ R + G + Sbjct: 1440 NDNQLRVLLISLKAGGEGLNLQVANRIFI-VDPWWNPAAELQAIQ-----RAHRIGQTKT 1493 Query: 165 VFVYYLIAQNTIDELVLQRLRTKSTIQD 192 V+ I +NT++E ++Q K + D Sbjct: 1494 VYAIRFIIENTVEEKIIQLQNKKQLVFD 1521 >gi|19115773|ref|NP_594861.1| ATP-dependent DNA helicase Snf21 [Schizosaccharomyces pombe 972h-] gi|46397295|sp|Q9UTN6|SNF21_SCHPO RecName: Full=Chromatin structure-remodeling complex subunit snf21; AltName: Full=ATP-dependent helicase snf21; AltName: Full=RSC complex subunit snf21 gi|5830480|emb|CAB54824.1| ATP-dependent DNA helicase Snf21 [Schizosaccharomyces pombe] gi|42558224|dbj|BAD11105.1| SNF2-family ATP dependent chromatin remodeling factor snf21 [Schizosaccharomyces pombe] Length = 1199 Score = 37.0 bits (84), Expect = 1.5, Method: Compositional matrix adjust. Identities = 28/96 (29%), Positives = 46/96 (47%), Gaps = 12/96 (12%) Query: 107 GKIPLLFAHPASCGHGLNLQYGGNILVFFSLW---WDLEEHQQMIERIGVTRQRQAGFKR 163 ++ L + G GLNLQ +++F S W DL + Q RIG T++ Sbjct: 803 AEVNLFLLSTRAGGLGLNLQTADTVIIFDSDWNPHQDL-QAQDRAHRIGQTKE------- 854 Query: 164 AVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 V +Y LI + +++E +L R + K I ++ A K Sbjct: 855 -VRIYRLITEKSVEENILARAQYKLDIDGKVIQAGK 889 >gi|317025573|ref|XP_001389339.2| ISWI chromatin-remodeling complex ATPase ISW2 [Aspergillus niger CBS 513.88] Length = 1121 Score = 37.0 bits (84), Expect = 1.5, Method: Compositional matrix adjust. Identities = 43/150 (28%), Positives = 64/150 (42%), Gaps = 44/150 (29%) Query: 81 LARLQKA------FPQ-GRTLD--KDPCTIQEWNEGKIPLLFAH------------PAS- 118 LAR+QK F Q R LD +D C +E+N +I AH P S Sbjct: 510 LARMQKQGSRVLIFSQMSRVLDILEDYCVFREYNYCRIDGTTAHEDRIAAIDEYNKPGSE 569 Query: 119 ----------CGHGLNLQYGGNILVFFSLWWDLEEHQQMIER---IGVTRQRQAGFKRAV 165 G G+NL +I+V F W+ + Q ++R IG T+Q V Sbjct: 570 KFIFLLTTRAGGLGINLTTA-DIVVLFDSDWNPQADLQAMDRAHRIGQTKQ--------V 620 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 V+ + +N I+E VL+R K + L++ Sbjct: 621 VVFRFVTENAIEEKVLERAAQKLRLDQLVI 650 >gi|148379627|ref|YP_001254168.1| helicase, SNF2/RAD54 family [Clostridium botulinum A str. ATCC 3502] gi|153931482|ref|YP_001384006.1| Snf2/Rad54 family helicase [Clostridium botulinum A str. ATCC 19397] gi|153936716|ref|YP_001387549.1| Snf2/Rad54 family helicase [Clostridium botulinum A str. Hall] gi|226948994|ref|YP_002804085.1| helicase, SNF2/RAD54 family [Clostridium botulinum A2 str. Kyoto] gi|148289111|emb|CAL83205.1| putative helicase [Clostridium botulinum A str. ATCC 3502] gi|152927526|gb|ABS33026.1| helicase, SNF2/RAD54 family [Clostridium botulinum A str. ATCC 19397] gi|152932630|gb|ABS38129.1| helicase, SNF2/RAD54 family [Clostridium botulinum A str. Hall] gi|226841046|gb|ACO83712.1| helicase, SNF2/RAD54 family [Clostridium botulinum A2 str. Kyoto] Length = 1077 Score = 37.0 bits (84), Expect = 1.5, Method: Composition-based stats. Identities = 24/78 (30%), Positives = 39/78 (50%), Gaps = 6/78 (7%) Query: 101 IQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 ++++N GK + + G GLNL +I++ F WW+ +E R + G Sbjct: 965 VKDFNNGKGDIFLISLKAGGTGLNLT-SADIVIHFDPWWN-----PAVEDQASDRAHRIG 1018 Query: 161 FKRAVFVYYLIAQNTIDE 178 K+ V V LIA+ TI+E Sbjct: 1019 QKKTVEVIRLIAKGTIEE 1036 >gi|50286955|ref|XP_445907.1| hypothetical protein [Candida glabrata CBS 138] gi|74691046|sp|Q6FV37|INO80_CANGA RecName: Full=Putative DNA helicase INO80 gi|49525213|emb|CAG58826.1| unnamed protein product [Candida glabrata] Length = 1484 Score = 37.0 bits (84), Expect = 1.5, Method: Compositional matrix adjust. Identities = 24/85 (28%), Positives = 41/85 (48%), Gaps = 10/85 (11%) Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQM--IERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 G G+NL ++ + S W + Q M R+G T+Q V VY L+ + TI+ Sbjct: 1374 GLGINLTAADTVIFYDSDWNPTIDSQAMDRAHRLGQTKQ--------VTVYRLLVRGTIE 1425 Query: 178 ELVLQRLRTKSTIQDLLLNALKKET 202 E + R + K +Q +++ K+T Sbjct: 1426 ERMRDRAKQKEQVQQVVMEGKTKDT 1450 >gi|311032686|ref|ZP_07710776.1| SWF/SNF family helicase [Bacillus sp. m3-13] Length = 1044 Score = 37.0 bits (84), Expect = 1.5, Method: Compositional matrix adjust. Identities = 21/77 (27%), Positives = 36/77 (46%), Gaps = 6/77 (7%) Query: 102 QEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGF 161 + +N G+ + G GLNL G + ++ + LWW+ +E R + G Sbjct: 936 ERFNSGERDFFLISLKAGGTGLNLT-GADTVILYDLWWN-----PAVEEQAADRAHRMGQ 989 Query: 162 KRAVFVYYLIAQNTIDE 178 + V V L+A+ TI+E Sbjct: 990 TQTVQVIKLVARGTIEE 1006 >gi|302308944|ref|NP_986109.2| AFR562Cp [Ashbya gossypii ATCC 10895] gi|299790868|gb|AAS53933.2| AFR562Cp [Ashbya gossypii ATCC 10895] Length = 1445 Score = 37.0 bits (84), Expect = 1.5, Method: Compositional matrix adjust. Identities = 24/82 (29%), Positives = 41/82 (50%), Gaps = 6/82 (7%) Query: 118 SCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 + G GLNLQ +++F + W HQ + + R + G K V + LI N+++ Sbjct: 961 AGGLGLNLQTADTVIIFDTDW---NPHQDLQAQ---DRAHRIGQKNEVRILRLITDNSVE 1014 Query: 178 ELVLQRLRTKSTIQDLLLNALK 199 E++L+R K I ++ A K Sbjct: 1015 EVILERAHRKLDIDGKVIQAGK 1036 >gi|229084801|ref|ZP_04217060.1| Helicase, SWF/SNF [Bacillus cereus Rock3-44] gi|228698515|gb|EEL51241.1| Helicase, SWF/SNF [Bacillus cereus Rock3-44] Length = 1071 Score = 37.0 bits (84), Expect = 1.5, Method: Compositional matrix adjust. Identities = 24/75 (32%), Positives = 34/75 (45%), Gaps = 6/75 (8%) Query: 104 WNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKR 163 +NEG+ L + G GLNL + + + LWW+ QQ R + G K Sbjct: 965 FNEGEGDLFLISLKAGGTGLNLTGADTV-ILYDLWWNPAVEQQ-----AADRAYRMGQKN 1018 Query: 164 AVFVYYLIAQNTIDE 178 V V L+A TI+E Sbjct: 1019 TVQVIKLVAHGTIEE 1033 >gi|294658308|ref|XP_002770756.1| DEHA2F06446p [Debaryomyces hansenii CBS767] gi|202953033|emb|CAR66284.1| DEHA2F06446p [Debaryomyces hansenii] Length = 884 Score = 37.0 bits (84), Expect = 1.5, Method: Composition-based stats. Identities = 25/79 (31%), Positives = 38/79 (48%), Gaps = 6/79 (7%) Query: 118 SCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 S G GLNL G + L+ F W+ Q + RI + G + VF+Y ++ ID Sbjct: 671 SGGVGLNL-IGASRLILFDNDWNPSIDLQAMARI-----HRDGQTKPVFIYRIMTTGCID 724 Query: 178 ELVLQRLRTKSTIQDLLLN 196 E + QR K+ + D L+ Sbjct: 725 EKIFQRQMMKNNLSDKFLD 743 >gi|170755378|ref|YP_001781299.1| Snf2/Rad54 family helicase [Clostridium botulinum B1 str. Okra] gi|169120590|gb|ACA44426.1| helicase, SNF2/RAD54 family [Clostridium botulinum B1 str. Okra] Length = 1077 Score = 37.0 bits (84), Expect = 1.5, Method: Composition-based stats. Identities = 24/78 (30%), Positives = 39/78 (50%), Gaps = 6/78 (7%) Query: 101 IQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 ++++N GK + + G GLNL +I++ F WW+ +E R + G Sbjct: 965 VKDFNNGKGDIFLISLKAGGTGLNLT-SADIVIHFDPWWN-----PAVEDQASDRAHRIG 1018 Query: 161 FKRAVFVYYLIAQNTIDE 178 K+ V V LIA+ TI+E Sbjct: 1019 QKKTVEVIRLIAKGTIEE 1036 >gi|168180326|ref|ZP_02614990.1| helicase, SNF2/RAD54 family [Clostridium botulinum NCTC 2916] gi|182668683|gb|EDT80661.1| helicase, SNF2/RAD54 family [Clostridium botulinum NCTC 2916] Length = 1077 Score = 37.0 bits (84), Expect = 1.5, Method: Composition-based stats. Identities = 24/78 (30%), Positives = 39/78 (50%), Gaps = 6/78 (7%) Query: 101 IQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 ++++N GK + + G GLNL +I++ F WW+ +E R + G Sbjct: 965 VKDFNNGKGDIFLISLKAGGTGLNLT-SADIVIHFDPWWN-----PAVEDQASDRAHRIG 1018 Query: 161 FKRAVFVYYLIAQNTIDE 178 K+ V V LIA+ TI+E Sbjct: 1019 QKKTVEVIRLIAKGTIEE 1036 >gi|17561718|ref|NP_503548.1| hypothetical protein F59A7.8 [Caenorhabditis elegans] gi|2291218|gb|AAB65339.1| Hypothetical protein F59A7.8 [Caenorhabditis elegans] Length = 518 Score = 37.0 bits (84), Expect = 1.5, Method: Compositional matrix adjust. Identities = 23/62 (37%), Positives = 34/62 (54%), Gaps = 6/62 (9%) Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 G GLNL GGN L+ L W+ QQ +RI + G K+ V ++ LI + TI++ Sbjct: 419 GVGLNL-IGGNHLIMVDLHWNPALEQQACDRI-----YRMGQKKEVHIHRLIVKETIEQR 472 Query: 180 VL 181 V+ Sbjct: 473 VM 474 >gi|292495070|sp|P38086|RDH54_YEAST RecName: Full=DNA repair and recombination protein RDH54; AltName: Full=RAD homolog 54; AltName: Full=Recombination factor TID1; AltName: Full=Two hybrid interaction with DMC1 protein 1; Includes: RecName: Full=DNA topoisomerase; Includes: RecName: Full=Putative helicase gi|433837|emb|CAA53930.1| unnamed protein product [Saccharomyces cerevisiae] gi|536326|emb|CAA85017.1| RDH54 [Saccharomyces cerevisiae] Length = 958 Score = 37.0 bits (84), Expect = 1.5, Method: Composition-based stats. Identities = 26/78 (33%), Positives = 38/78 (48%), Gaps = 6/78 (7%) Query: 118 SCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 S G GLNL G + L+ F W+ Q + RI + G K+ F+Y L+ ID Sbjct: 742 SGGVGLNL-VGRSRLILFDNDWNPSVDLQAMSRI-----HRDGQKKPCFIYRLVTTGCID 795 Query: 178 ELVLQRLRTKSTIQDLLL 195 E +LQR K+++ L Sbjct: 796 EKILQRQLMKNSLSQKFL 813 >gi|228914427|ref|ZP_04078038.1| Helicase, SWF/SNF [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] gi|228845210|gb|EEM90250.1| Helicase, SWF/SNF [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] Length = 1064 Score = 37.0 bits (84), Expect = 1.6, Method: Compositional matrix adjust. Identities = 24/75 (32%), Positives = 34/75 (45%), Gaps = 6/75 (8%) Query: 104 WNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKR 163 +NEG+ L + G GLNL + + + LWW+ QQ R + G K Sbjct: 958 FNEGEGDLFLISLKAGGTGLNLTGADTV-ILYDLWWNPAVEQQ-----AADRAYRMGQKN 1011 Query: 164 AVFVYYLIAQNTIDE 178 V V L+A TI+E Sbjct: 1012 TVQVIKLVAHGTIEE 1026 >gi|42780946|ref|NP_978193.1| helicase, putative [Bacillus cereus ATCC 10987] gi|42736867|gb|AAS40801.1| helicase, putative [Bacillus cereus ATCC 10987] Length = 1064 Score = 37.0 bits (84), Expect = 1.6, Method: Compositional matrix adjust. Identities = 24/75 (32%), Positives = 34/75 (45%), Gaps = 6/75 (8%) Query: 104 WNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKR 163 +NEG+ L + G GLNL + + + LWW+ QQ R + G K Sbjct: 958 FNEGEGDLFLISLKAGGTGLNLTGADTV-ILYDLWWNPAVEQQ-----AADRAYRMGQKN 1011 Query: 164 AVFVYYLIAQNTIDE 178 V V L+A TI+E Sbjct: 1012 TVQVIKLVAHGTIEE 1026 >gi|193084404|gb|ACF10057.1| SNF2-related protein [uncultured marine crenarchaeote SAT1000-21-C11] Length = 569 Score = 37.0 bits (84), Expect = 1.6, Method: Compositional matrix adjust. Identities = 28/96 (29%), Positives = 43/96 (44%), Gaps = 6/96 (6%) Query: 101 IQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 I + G L+ + G+NL ++F L W H+Q +R+ + G Sbjct: 454 IDNFQNGGTKLIVVGLRAGNLGINLTRA-KYVIFAELDWSPAIHRQAEDRL-----HRIG 507 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 K VF YYLI + T+DE V L KS D +++ Sbjct: 508 QKNTVFAYYLIGKRTLDEHVANILVDKSYEIDAIMD 543 >gi|167383963|ref|XP_001736758.1| helicase [Entamoeba dispar SAW760] gi|165900796|gb|EDR27036.1| helicase, putative [Entamoeba dispar SAW760] Length = 954 Score = 37.0 bits (84), Expect = 1.6, Method: Compositional matrix adjust. Identities = 26/104 (25%), Positives = 49/104 (47%), Gaps = 8/104 (7%) Query: 101 IQEWNE--GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQ 158 I ++N+ GK+ + S G G+NLQ ++++ S W + Q M R + Sbjct: 466 INDFNDPNGKVSIFLLSTRSGGLGINLQSADTVILYDSDWNPQSDIQAM------DRAHR 519 Query: 159 AGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKET 202 G + V VY LI + T ++ +++ K + L++ + K T Sbjct: 520 IGQTKPVTVYRLICEGTAEQRLIRVAERKLMLNRLVMQSGKTAT 563 >gi|39978121|ref|XP_370448.1| hypothetical protein MGG_06945 [Magnaporthe oryzae 70-15] gi|145013481|gb|EDJ98122.1| hypothetical protein MGG_06945 [Magnaporthe oryzae 70-15] Length = 1103 Score = 37.0 bits (84), Expect = 1.6, Method: Compositional matrix adjust. Identities = 24/67 (35%), Positives = 34/67 (50%), Gaps = 12/67 (17%) Query: 120 GHGLNLQYGGNILVFFSLW---WDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTI 176 G GLN+ +++F W WDL+ Q RIG TR V V+ L++Q TI Sbjct: 650 GVGLNITSANKVVIFDPHWNPSWDLQ-AQDRAYRIGQTRD--------VDVFRLVSQGTI 700 Query: 177 DELVLQR 183 +E+V R Sbjct: 701 EEIVYAR 707 >gi|322805986|emb|CBZ03553.1| swf/SNF family helicase [Clostridium botulinum H04402 065] Length = 1077 Score = 37.0 bits (84), Expect = 1.6, Method: Composition-based stats. Identities = 24/78 (30%), Positives = 39/78 (50%), Gaps = 6/78 (7%) Query: 101 IQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 ++++N GK + + G GLNL +I++ F WW+ +E R + G Sbjct: 965 VKDFNNGKGDIFLISLKAGGTGLNLT-SADIVIHFDPWWN-----PAVEDQASDRAHRIG 1018 Query: 161 FKRAVFVYYLIAQNTIDE 178 K+ V V LIA+ TI+E Sbjct: 1019 QKKTVEVIRLIAKGTIEE 1036 >gi|168184681|ref|ZP_02619345.1| helicase, SNF2/RAD54 family [Clostridium botulinum Bf] gi|182672230|gb|EDT84191.1| helicase, SNF2/RAD54 family [Clostridium botulinum Bf] Length = 1077 Score = 37.0 bits (84), Expect = 1.6, Method: Composition-based stats. Identities = 24/78 (30%), Positives = 39/78 (50%), Gaps = 6/78 (7%) Query: 101 IQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 ++++N GK + + G GLNL +I++ F WW+ +E R + G Sbjct: 965 VKDFNNGKGDIFLISLKAGGTGLNLT-SADIVIHFDPWWN-----PAVEDQASDRAHRIG 1018 Query: 161 FKRAVFVYYLIAQNTIDE 178 K+ V V LIA+ TI+E Sbjct: 1019 QKKTVEVIRLIAKGTIEE 1036 >gi|297625268|ref|YP_003687031.1| Helicase (SNF2-related protein) [Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1] gi|296921033|emb|CBL55571.1| Helicase (SNF2-related protein) [Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1] Length = 1132 Score = 37.0 bits (84), Expect = 1.6, Method: Composition-based stats. Identities = 27/102 (26%), Positives = 44/102 (43%), Gaps = 7/102 (6%) Query: 91 GRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 GRT +D +Q + +G + G GL L + V WW+ Q I+R Sbjct: 1015 GRTRHRDE-RVQRFKDGNATAFLISLKAGGFGLTLTEADYVYVL-DPWWNPAAENQAIDR 1072 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQD 192 + G + V VY +++ NTI+E V+ + K + D Sbjct: 1073 -----THRIGQDKQVMVYRMVSTNTIEEKVVALQQRKRDLFD 1109 >gi|209881905|ref|XP_002142390.1| helicase [Cryptosporidium muris RN66] gi|209557996|gb|EEA08041.1| helicase conserved C-terminal domain-containing protein [Cryptosporidium muris RN66] Length = 836 Score = 37.0 bits (84), Expect = 1.6, Method: Compositional matrix adjust. Identities = 38/153 (24%), Positives = 60/153 (39%), Gaps = 20/153 (13%) Query: 52 HDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQE------WN 105 H E + A+E I+ K N L+ + K F R K P +E N Sbjct: 685 HHEMLDAIETILVKRKR---------NKSLSEINKHFVYIRIDGKTPGNKREEYVKEFQN 735 Query: 106 EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 + +CG GLNL G + +F L+W Q +R R + Sbjct: 736 NINCKVAVLSITACGQGLNLTSAGTV-IFAELYWVPGFMLQAEDRC----HRMGTQYSCI 790 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLLLNAL 198 ++YL+A+NT+D+ + L K I L+ + Sbjct: 791 NIHYLVAENTLDDKMWGILYKKQKIMASTLDGI 823 >gi|1769947|emb|CAA67095.1| SNF [Bacillus cereus ATCC 10987] Length = 1064 Score = 37.0 bits (84), Expect = 1.6, Method: Compositional matrix adjust. Identities = 24/75 (32%), Positives = 34/75 (45%), Gaps = 6/75 (8%) Query: 104 WNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKR 163 +NEG+ L + G GLNL + + + LWW+ QQ R + G K Sbjct: 958 FNEGEGDLFLISLKAGGTGLNLTGADTV-ILYDLWWNPAVEQQ-----AADRAYRMGQKN 1011 Query: 164 AVFVYYLIAQNTIDE 178 V V L+A TI+E Sbjct: 1012 TVQVIKLVAHGTIEE 1026 >gi|321257722|ref|XP_003193686.1| DNA recombination and repair protein Rad54B [Cryptococcus gattii WM276] gi|317460156|gb|ADV21899.1| DNA recombination and repair protein Rad54B, putative [Cryptococcus gattii WM276] Length = 818 Score = 37.0 bits (84), Expect = 1.6, Method: Compositional matrix adjust. Identities = 23/64 (35%), Positives = 31/64 (48%), Gaps = 6/64 (9%) Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 G G+NL G N LV F W+ QQ + R+ + G K+ FVY TI+E Sbjct: 657 GCGINL-IGANRLVLFDPDWNPASDQQALARVW-----RDGQKKECFVYRFQTTGTIEEK 710 Query: 180 VLQR 183 + QR Sbjct: 711 IFQR 714 >gi|153939497|ref|YP_001391002.1| Snf2/Rad54 family helicase [Clostridium botulinum F str. Langeland] gi|152935393|gb|ABS40891.1| helicase, SNF2/RAD54 family [Clostridium botulinum F str. Langeland] Length = 1077 Score = 37.0 bits (84), Expect = 1.6, Method: Composition-based stats. Identities = 24/78 (30%), Positives = 39/78 (50%), Gaps = 6/78 (7%) Query: 101 IQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 ++++N GK + + G GLNL +I++ F WW+ +E R + G Sbjct: 965 VKDFNNGKGDIFLISLKAGGTGLNLT-SADIVIHFDPWWN-----PAVEDQASDRAHRIG 1018 Query: 161 FKRAVFVYYLIAQNTIDE 178 K+ V V LIA+ TI+E Sbjct: 1019 QKKTVEVIRLIAKGTIEE 1036 >gi|146422206|ref|XP_001487044.1| hypothetical protein PGUG_00421 [Meyerozyma guilliermondii ATCC 6260] Length = 497 Score = 37.0 bits (84), Expect = 1.6, Method: Compositional matrix adjust. Identities = 24/103 (23%), Positives = 49/103 (47%), Gaps = 15/103 (14%) Query: 93 TLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIG 152 T ++DP KIP+ S G G+NL G + ++F+ W+ +Q +R Sbjct: 281 TFNRDP---------KIPVFILSTRSGGLGINLT-GADTVIFYDSDWNPAMDKQCQDRC- 329 Query: 153 VTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 + G R V +Y +++ TI+ +L++ K + ++++ Sbjct: 330 ----HRIGQSRDVHIYRFVSEYTIESNILKKANQKRHLDNVVI 368 >gi|198434196|ref|XP_002124510.1| PREDICTED: similar to helicase, lymphoid-specific [Ciona intestinalis] Length = 1444 Score = 37.0 bits (84), Expect = 1.6, Method: Composition-based stats. Identities = 25/100 (25%), Positives = 49/100 (49%), Gaps = 7/100 (7%) Query: 101 IQEWNEGKIPLLFAHPASCGH-GLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQA 159 I+E+N LF G G+NL G + ++ + W+ + Q +R + Sbjct: 1263 IEEFNNDPNVFLFLLSTRAGGLGINLT-GADTVIIYDSDWNPQNDSQAQDRC-----HRI 1316 Query: 160 GFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 G +R V VY ++ TID+ +++R K T++ ++++ K Sbjct: 1317 GQERPVMVYRMVTMATIDQQIMERAARKRTMEKMIMHEDK 1356 >gi|295695376|ref|YP_003588614.1| helicase domain protein [Bacillus tusciae DSM 2912] gi|295410978|gb|ADG05470.1| helicase domain protein [Bacillus tusciae DSM 2912] Length = 572 Score = 37.0 bits (84), Expect = 1.7, Method: Compositional matrix adjust. Identities = 25/81 (30%), Positives = 45/81 (55%), Gaps = 6/81 (7%) Query: 118 SCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 + G GLNLQ+ N ++ F L W+ +Q I RI + G R VF++ L +TI+ Sbjct: 434 AGGEGLNLQFC-NQIINFDLPWNPMRVEQRIGRI-----HRLGQTRDVFIHNLATADTIE 487 Query: 178 ELVLQRLRTKSTIQDLLLNAL 198 + +++ L+ K + +L++ L Sbjct: 488 QYIVELLQEKIRLFELVIGEL 508 >gi|229199361|ref|ZP_04326026.1| Helicase, SNF2/RAD54 [Bacillus cereus m1293] gi|228584075|gb|EEK42228.1| Helicase, SNF2/RAD54 [Bacillus cereus m1293] Length = 855 Score = 37.0 bits (84), Expect = 1.7, Method: Compositional matrix adjust. Identities = 31/135 (22%), Positives = 59/135 (43%), Gaps = 10/135 (7%) Query: 63 IEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHG 122 I N ++ HF + L + P+ + DK I+++ G + + G G Sbjct: 713 IGMGNMLKDVLEKHFGQRVLFLNGSVPK-KERDK---MIEQFQNGTYDIFILSLKAGGTG 768 Query: 123 LNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQ 182 LNL N ++ + WW+ +E R + G KR V V+ LI T++E + + Sbjct: 769 LNLTA-ANHVIHYDRWWN-----PAVENQATDRAYRIGQKRFVHVHKLITTGTLEEKIDE 822 Query: 183 RLRTKSTIQDLLLNA 197 L K ++ + ++ + Sbjct: 823 MLERKQSLNNAVITS 837 >gi|228975316|ref|ZP_04135873.1| Helicase, SNF2/RAD54 [Bacillus thuringiensis serovar thuringiensis str. T01001] gi|228981952|ref|ZP_04142247.1| Helicase, SNF2/RAD54 [Bacillus thuringiensis Bt407] gi|228778064|gb|EEM26336.1| Helicase, SNF2/RAD54 [Bacillus thuringiensis Bt407] gi|228784449|gb|EEM32471.1| Helicase, SNF2/RAD54 [Bacillus thuringiensis serovar thuringiensis str. T01001] Length = 855 Score = 37.0 bits (84), Expect = 1.7, Method: Compositional matrix adjust. Identities = 26/103 (25%), Positives = 48/103 (46%), Gaps = 7/103 (6%) Query: 95 DKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 D+D I+E+ G + + G GLNL N ++ + WW+ +E Sbjct: 742 DRDKM-IEEFQNGTYDIFILSLKAGGTGLNLTA-ANHVIHYDRWWN-----PAVENQATD 794 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 R + G KR V V+ LI T++E + + L K ++ + ++ + Sbjct: 795 RAYRIGQKRFVHVHKLITTGTLEEKIDEMLERKQSLNNAVITS 837 >gi|156095999|ref|XP_001614034.1| DNA repair protein rhp16 [Plasmodium vivax SaI-1] gi|148802908|gb|EDL44307.1| DNA repair protein rhp16, putative [Plasmodium vivax] Length = 1589 Score = 37.0 bits (84), Expect = 1.7, Method: Compositional matrix adjust. Identities = 29/104 (27%), Positives = 48/104 (46%), Gaps = 11/104 (10%) Query: 104 WNEGK-IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFK 162 +NE K + +L + G GLNLQ I + WW+ Q I+ R + G Sbjct: 1482 FNEDKHLRVLLISLKAGGEGLNLQVANRIFI-VDPWWNPAAELQAIQ-----RAHRIGQT 1535 Query: 163 RAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL----NALKKET 202 + V+ I +NT++E ++Q K + D + NA++K T Sbjct: 1536 KTVYATRFIIENTVEEKIVQLQNKKQLVFDCTIGDSGNAMQKLT 1579 >gi|221062029|ref|XP_002262584.1| DNA repair protein rhp16 [Plasmodium knowlesi strain H] gi|193811734|emb|CAQ42462.1| DNA repair protein rhp16, putative [Plasmodium knowlesi strain H] Length = 1527 Score = 37.0 bits (84), Expect = 1.7, Method: Compositional matrix adjust. Identities = 29/104 (27%), Positives = 48/104 (46%), Gaps = 11/104 (10%) Query: 104 WNEGK-IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFK 162 +NE K + +L + G GLNLQ I + WW+ Q I+ R + G Sbjct: 1420 FNEDKHLRVLLISLKAGGEGLNLQVANRIFI-VDPWWNPAAELQAIQ-----RAHRIGQT 1473 Query: 163 RAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL----NALKKET 202 + V+ I +NT++E ++Q K + D + NA++K T Sbjct: 1474 KTVYATRFIIENTVEEKIVQLQNKKQLVFDCTIGDSGNAMQKLT 1517 >gi|115453047|ref|NP_001050124.1| Os03g0352500 [Oryza sativa Japonica Group] gi|113548595|dbj|BAF12038.1| Os03g0352500 [Oryza sativa Japonica Group] Length = 214 Score = 37.0 bits (84), Expect = 1.7, Method: Compositional matrix adjust. Identities = 16/44 (36%), Positives = 29/44 (65%) Query: 152 GVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 + R + G + V VY LI ++TI+E +LQR + K+ +Q+L++ Sbjct: 1 AMDRTHRLGQTKEVTVYRLICKDTIEEKILQRAKQKNAVQELVM 44 >gi|297737996|emb|CBI27197.3| unnamed protein product [Vitis vinifera] Length = 1638 Score = 37.0 bits (84), Expect = 1.7, Method: Composition-based stats. Identities = 24/97 (24%), Positives = 45/97 (46%), Gaps = 7/97 (7%) Query: 101 IQEWNEGKIPLLFA-HPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQA 159 I +N+ K +F SCG G+NL ++++ S D H + + R + Sbjct: 577 IARFNQDKTRFVFLLSTRSCGLGINLATADTVIIYDS---DFNPHADIQ---AMNRAHRI 630 Query: 160 GFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 G + VY L+ + +++E +LQ + K + L +N Sbjct: 631 GQSNRLLVYRLVVRASVEERILQLAKKKLMLDQLFVN 667 >gi|229050914|ref|ZP_04194465.1| Helicase, SNF2/RAD54 [Bacillus cereus AH676] gi|228722459|gb|EEL73853.1| Helicase, SNF2/RAD54 [Bacillus cereus AH676] Length = 856 Score = 37.0 bits (84), Expect = 1.7, Method: Compositional matrix adjust. Identities = 26/103 (25%), Positives = 48/103 (46%), Gaps = 7/103 (6%) Query: 95 DKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 D+D I+E+ G + + G GLNL N ++ + WW+ +E Sbjct: 743 DRDKM-IEEFQNGTYDIFILSLKAGGTGLNLTA-ANHVIHYDRWWN-----PAVENQATD 795 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 R + G KR V V+ LI T++E + + L K ++ + ++ + Sbjct: 796 RAYRIGQKRFVHVHKLITTGTLEEKIDEMLERKQSLNNAVITS 838 >gi|294659915|ref|XP_462354.2| DEHA2G18722p [Debaryomyces hansenii CBS767] gi|199434332|emb|CAG90861.2| DEHA2G18722p [Debaryomyces hansenii] Length = 834 Score = 37.0 bits (84), Expect = 1.7, Method: Composition-based stats. Identities = 21/75 (28%), Positives = 40/75 (53%), Gaps = 7/75 (9%) Query: 119 CGH-GLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 CG GLNL + + F WW+ + +Q I+R+ + G + V +Y L +NT++ Sbjct: 730 CGSVGLNLTCASQV-ILFDPWWNPQIQEQAIDRV-----YRIGQTKPVDIYELTVKNTVE 783 Query: 178 ELVLQRLRTKSTIQD 192 + +L+ +TK + + Sbjct: 784 DNILKLQKTKRQLAN 798 >gi|311032005|ref|ZP_07710095.1| SNF2 family helicase [Bacillus sp. m3-13] Length = 937 Score = 37.0 bits (84), Expect = 1.7, Method: Compositional matrix adjust. Identities = 24/97 (24%), Positives = 46/97 (47%), Gaps = 6/97 (6%) Query: 101 IQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 IQE+ +G+ +L + G GLNL N ++ + WW+ +E R + G Sbjct: 828 IQEFQDGEFHVLVLSLKAGGTGLNLT-AANHVIHYDRWWN-----PAVENQATDRAYRIG 881 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 R V V+ IA T++E + + +K + + ++ + Sbjct: 882 QSRFVHVHKFIATGTLEEKIDAMIESKQALNNQIITS 918 >gi|302406510|ref|XP_003001091.1| SNF2 family ATP-dependent chromatin-remodeling factor snf21 [Verticillium albo-atrum VaMs.102] gi|261360349|gb|EEY22777.1| SNF2 family ATP-dependent chromatin-remodeling factor snf21 [Verticillium albo-atrum VaMs.102] Length = 1392 Score = 37.0 bits (84), Expect = 1.7, Method: Compositional matrix adjust. Identities = 22/70 (31%), Positives = 37/70 (52%), Gaps = 6/70 (8%) Query: 118 SCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 + G GLNLQ ++++ S W HQ + + R + G K V + LI+ N+++ Sbjct: 898 AGGLGLNLQTADTVIIYDSDW---NPHQDLQAQ---DRAHRIGQKNEVRILRLISSNSVE 951 Query: 178 ELVLQRLRTK 187 E +L+R R K Sbjct: 952 EKILERARFK 961 >gi|195387391|ref|XP_002052379.1| GJ22014 [Drosophila virilis] gi|194148836|gb|EDW64534.1| GJ22014 [Drosophila virilis] Length = 267 Score = 37.0 bits (84), Expect = 1.7, Method: Compositional matrix adjust. Identities = 24/71 (33%), Positives = 35/71 (49%), Gaps = 6/71 (8%) Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 G G+NL G N ++ W+ QQ I RI + G K+ ++Y LIA T++E Sbjct: 107 GQGINL-IGANRVIILDTSWNPSNDQQNIFRIF-----RLGQKKNCYIYRLIAMGTMEEK 160 Query: 180 VLQRLRTKSTI 190 V R TK + Sbjct: 161 VYSRSVTKQAM 171 >gi|302673648|ref|XP_003026510.1| hypothetical protein SCHCODRAFT_258840 [Schizophyllum commune H4-8] gi|300100193|gb|EFI91607.1| hypothetical protein SCHCODRAFT_258840 [Schizophyllum commune H4-8] Length = 1361 Score = 37.0 bits (84), Expect = 1.7, Method: Compositional matrix adjust. Identities = 26/83 (31%), Positives = 40/83 (48%), Gaps = 12/83 (14%) Query: 118 SCGHGLNLQYGGNILVFFSLW---WDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQN 174 + G GLNLQ +++F S W DL + Q RIG T +AV + I + Sbjct: 883 AGGLGLNLQTADTVIIFDSDWNPHADL-QAQDRAHRIGQT--------KAVLILRFITEK 933 Query: 175 TIDELVLQRLRTKSTIQDLLLNA 197 +++E + QR R K I ++ A Sbjct: 934 SVEEAMYQRARYKLDIDGKVIQA 956 >gi|228923978|ref|ZP_04087255.1| Helicase, SNF2/RAD54 [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] gi|228835777|gb|EEM81141.1| Helicase, SNF2/RAD54 [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] Length = 856 Score = 37.0 bits (84), Expect = 1.7, Method: Compositional matrix adjust. Identities = 26/103 (25%), Positives = 48/103 (46%), Gaps = 7/103 (6%) Query: 95 DKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 D+D I+E+ G + + G GLNL N ++ + WW+ +E Sbjct: 743 DRDKM-IEEFQNGTYDIFILSLKAGGTGLNLTA-ANHVIHYDRWWN-----PAVENQATD 795 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 R + G KR V V+ LI T++E + + L K ++ + ++ + Sbjct: 796 RAYRIGQKRFVHVHKLITTGTLEEKIDEMLERKQSLNNAVITS 838 >gi|228955491|ref|ZP_04117496.1| Helicase, SNF2/RAD54 [Bacillus thuringiensis serovar kurstaki str. T03a001] gi|228804283|gb|EEM50897.1| Helicase, SNF2/RAD54 [Bacillus thuringiensis serovar kurstaki str. T03a001] Length = 856 Score = 37.0 bits (84), Expect = 1.7, Method: Compositional matrix adjust. Identities = 26/103 (25%), Positives = 48/103 (46%), Gaps = 7/103 (6%) Query: 95 DKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 D+D I+E+ G + + G GLNL N ++ + WW+ +E Sbjct: 743 DRDKM-IEEFQNGTYDIFILSLKAGGTGLNLTA-ANHVIHYDRWWN-----PAVENQATD 795 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 R + G KR V V+ LI T++E + + L K ++ + ++ + Sbjct: 796 RAYRIGQKRFVHVHKLITTGTLEEKIDEMLERKQSLNNAVITS 838 >gi|326431158|gb|EGD76728.1| SNF2 family DNA-dependent ATPase [Salpingoeca sp. ATCC 50818] Length = 1797 Score = 37.0 bits (84), Expect = 1.7, Method: Composition-based stats. Identities = 23/80 (28%), Positives = 41/80 (51%), Gaps = 6/80 (7%) Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 G GLNLQ ++++ S W HQ + + R + G R V V+ L+ N+++E Sbjct: 1199 GLGLNLQTADTVIIYDSDW---NPHQDLQAQ---DRAHRIGQTREVRVFRLVTVNSVEER 1252 Query: 180 VLQRLRTKSTIQDLLLNALK 199 +L+R + K + ++ A K Sbjct: 1253 ILERAKYKLDVDQKVIQAGK 1272 >gi|302916021|ref|XP_003051821.1| chromatin remodeling complex SWI/SNF, component SWI2 and related ATPase [Nectria haematococca mpVI 77-13-4] gi|256732760|gb|EEU46108.1| chromatin remodeling complex SWI/SNF, component SWI2 and related ATPase [Nectria haematococca mpVI 77-13-4] Length = 1427 Score = 37.0 bits (84), Expect = 1.7, Method: Compositional matrix adjust. Identities = 22/70 (31%), Positives = 37/70 (52%), Gaps = 6/70 (8%) Query: 118 SCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 + G GLNLQ ++++ S W HQ + + R + G K V + LI+ N+++ Sbjct: 951 AGGLGLNLQTADTVIIYDSDW---NPHQDLQAQ---DRAHRIGQKNEVRILRLISSNSVE 1004 Query: 178 ELVLQRLRTK 187 E +L+R R K Sbjct: 1005 EKILERARFK 1014 >gi|228961502|ref|ZP_04123113.1| Helicase, SNF2/RAD54 [Bacillus thuringiensis serovar pakistani str. T13001] gi|228798216|gb|EEM45218.1| Helicase, SNF2/RAD54 [Bacillus thuringiensis serovar pakistani str. T13001] Length = 856 Score = 37.0 bits (84), Expect = 1.7, Method: Compositional matrix adjust. Identities = 26/103 (25%), Positives = 48/103 (46%), Gaps = 7/103 (6%) Query: 95 DKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 D+D I+E+ G + + G GLNL N ++ + WW+ +E Sbjct: 743 DRDKM-IEEFQNGTYDIFILSLKAGGTGLNLTA-ANHVIHYDRWWN-----PAVENQATD 795 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 R + G KR V V+ LI T++E + + L K ++ + ++ + Sbjct: 796 RAYRIGQKRFVHVHKLITTGTLEEKIDEMLERKQSLNNAVITS 838 >gi|58266612|ref|XP_570462.1| DNA supercoiling [Cryptococcus neoformans var. neoformans JEC21] gi|134110952|ref|XP_775940.1| hypothetical protein CNBD3470 [Cryptococcus neoformans var. neoformans B-3501A] gi|50258606|gb|EAL21293.1| hypothetical protein CNBD3470 [Cryptococcus neoformans var. neoformans B-3501A] gi|57226695|gb|AAW43155.1| DNA supercoiling, putative [Cryptococcus neoformans var. neoformans JEC21] Length = 818 Score = 37.0 bits (84), Expect = 1.7, Method: Compositional matrix adjust. Identities = 23/64 (35%), Positives = 31/64 (48%), Gaps = 6/64 (9%) Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 G G+NL G N LV F W+ QQ + R+ + G K+ FVY TI+E Sbjct: 657 GCGINL-IGANRLVLFDPDWNPASDQQALARVW-----RDGQKKECFVYRFQTTGTIEEK 710 Query: 180 VLQR 183 + QR Sbjct: 711 IFQR 714 >gi|229147777|ref|ZP_04276120.1| Helicase, SNF2/RAD54 [Bacillus cereus BDRD-ST24] gi|228635790|gb|EEK92277.1| Helicase, SNF2/RAD54 [Bacillus cereus BDRD-ST24] Length = 856 Score = 37.0 bits (84), Expect = 1.8, Method: Compositional matrix adjust. Identities = 26/103 (25%), Positives = 48/103 (46%), Gaps = 7/103 (6%) Query: 95 DKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 D+D I+E+ G + + G GLNL N ++ + WW+ +E Sbjct: 743 DRDKM-IEEFQNGTYDIFILSLKAGGTGLNLTA-ANHVIHYDRWWN-----PAVENQATD 795 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 R + G KR V V+ LI T++E + + L K ++ + ++ + Sbjct: 796 RAYRIGQKRFVHVHKLITTGTLEEKIDEMLERKQSLNNAVITS 838 >gi|229193493|ref|ZP_04320440.1| Helicase, SNF2/RAD54 [Bacillus cereus ATCC 10876] gi|228590025|gb|EEK47897.1| Helicase, SNF2/RAD54 [Bacillus cereus ATCC 10876] Length = 856 Score = 37.0 bits (84), Expect = 1.8, Method: Compositional matrix adjust. Identities = 26/103 (25%), Positives = 48/103 (46%), Gaps = 7/103 (6%) Query: 95 DKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 D+D I+E+ G + + G GLNL N ++ + WW+ +E Sbjct: 743 DRDKM-IEEFQNGTYDIFILSLKAGGTGLNLTA-ANHVIHYDRWWN-----PAVENQATD 795 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 R + G KR V V+ LI T++E + + L K ++ + ++ + Sbjct: 796 RAYRIGQKRFVHVHKLITTGTLEEKIDEMLERKQSLNNAVITS 838 >gi|166240632|ref|XP_001732968.1| SNF2-related domain-containing protein [Dictyostelium discoideum AX4] gi|165988704|gb|EDR41103.1| SNF2-related domain-containing protein [Dictyostelium discoideum AX4] Length = 1838 Score = 37.0 bits (84), Expect = 1.8, Method: Composition-based stats. Identities = 22/83 (26%), Positives = 42/83 (50%), Gaps = 6/83 (7%) Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 G GLNL ++ + WW+ +Q I+R+ + G + V V + +++I+E Sbjct: 1751 GLGLNLVAASHVFLM-DPWWNPSTEEQAIDRV-----YRIGQNKNVNVIRFLIKDSIEER 1804 Query: 180 VLQRLRTKSTIQDLLLNALKKET 202 +L ++K + LN +KK+T Sbjct: 1805 ILNLQKSKKDLAKEALNTMKKQT 1827 >gi|156369786|ref|XP_001628155.1| predicted protein [Nematostella vectensis] gi|156215124|gb|EDO36092.1| predicted protein [Nematostella vectensis] Length = 756 Score = 37.0 bits (84), Expect = 1.8, Method: Compositional matrix adjust. Identities = 24/80 (30%), Positives = 38/80 (47%), Gaps = 4/80 (5%) Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG---FKRAVFVYYLIAQNTI 176 G GLNL G N LV F W+ Q + R+ Q++ VF+Y L++ TI Sbjct: 582 GCGLNL-IGANRLVMFDPDWNPANDDQAMARVWRDGQKKKAIFDLLLQVFIYRLLSTGTI 640 Query: 177 DELVLQRLRTKSTIQDLLLN 196 +E + QR K + +++ Sbjct: 641 EEKIFQRQAHKKALSSCVVD 660 >gi|229542511|ref|ZP_04431571.1| SNF2-related protein [Bacillus coagulans 36D1] gi|229326931|gb|EEN92606.1| SNF2-related protein [Bacillus coagulans 36D1] Length = 933 Score = 37.0 bits (84), Expect = 1.8, Method: Compositional matrix adjust. Identities = 29/121 (23%), Positives = 52/121 (42%), Gaps = 10/121 (8%) Query: 77 FNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFS 136 F D+ L + P+ K I+++ P+ + G GLNL N ++ + Sbjct: 803 FGLDVPFLNGSMPKA----KRDQLIRDFQNKAFPVFLLSLKAGGTGLNLTA-ANHVIHYD 857 Query: 137 LWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 WW+ +E R + G +R V V+ LIA T++E + L K + D ++ Sbjct: 858 RWWN-----PAVENQATDRAHRIGQQRFVHVHKLIATGTLEEKIDAMLEKKQALNDEIIQ 912 Query: 197 A 197 + Sbjct: 913 S 913 >gi|228968365|ref|ZP_04129360.1| Helicase, SNF2/RAD54 [Bacillus thuringiensis serovar sotto str. T04001] gi|228791331|gb|EEM38938.1| Helicase, SNF2/RAD54 [Bacillus thuringiensis serovar sotto str. T04001] Length = 856 Score = 37.0 bits (84), Expect = 1.8, Method: Compositional matrix adjust. Identities = 26/103 (25%), Positives = 48/103 (46%), Gaps = 7/103 (6%) Query: 95 DKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 D+D I+E+ G + + G GLNL N ++ + WW+ +E Sbjct: 743 DRDKM-IEEFQNGTYDIFILSLKAGGTGLNLTA-ANHVIHYDRWWN-----PAVENQATD 795 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 R + G KR V V+ LI T++E + + L K ++ + ++ + Sbjct: 796 RAYRIGQKRFVHVHKLITTGTLEEKIDEMLERKQSLNNAVITS 838 >gi|229153405|ref|ZP_04281583.1| Helicase, SNF2/RAD54 [Bacillus cereus m1550] gi|228630009|gb|EEK86660.1| Helicase, SNF2/RAD54 [Bacillus cereus m1550] Length = 856 Score = 37.0 bits (84), Expect = 1.8, Method: Compositional matrix adjust. Identities = 26/103 (25%), Positives = 48/103 (46%), Gaps = 7/103 (6%) Query: 95 DKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 D+D I+E+ G + + G GLNL N ++ + WW+ +E Sbjct: 743 DRDKM-IEEFQNGTYDIFILSLKAGGTGLNLTA-ANHVIHYDRWWN-----PAVENQATD 795 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 R + G KR V V+ LI T++E + + L K ++ + ++ + Sbjct: 796 RAYRIGQKRFVHVHKLITTGTLEEKIDEMLERKQSLNNAVITS 838 >gi|126665998|ref|ZP_01736978.1| helicase/SNF2 family domain protein [Marinobacter sp. ELB17] gi|126629320|gb|EAZ99937.1| helicase/SNF2 family domain protein [Marinobacter sp. ELB17] Length = 942 Score = 37.0 bits (84), Expect = 1.8, Method: Compositional matrix adjust. Identities = 23/70 (32%), Positives = 42/70 (60%), Gaps = 5/70 (7%) Query: 118 SCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 + G G+NLQ +I+V + L W+ ++++RIG R + G K+ V V+ L + +T D Sbjct: 594 AGGEGINLQRKCHIMVNYDLPWN---PMRLVQRIG--RLYRYGQKKRVVVFNLHSPDTAD 648 Query: 178 ELVLQRLRTK 187 E V++ + T+ Sbjct: 649 EQVMELMYTR 658 >gi|326473788|gb|EGD97797.1| SNF2 family helicase/ATPase [Trichophyton tonsurans CBS 112818] gi|326485394|gb|EGE09404.1| SNF2 family helicase/ATPase PasG [Trichophyton equinum CBS 127.97] Length = 861 Score = 37.0 bits (84), Expect = 1.8, Method: Compositional matrix adjust. Identities = 24/79 (30%), Positives = 40/79 (50%), Gaps = 12/79 (15%) Query: 120 GHGLNLQYGGNILVFFSLW---WDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTI 176 G G+NL +++F S W DL+ Q RIG T+ V VY L + TI Sbjct: 697 GQGINLTAADTVILFDSDWNPQQDLQ-AQDRAHRIGQTK--------PVIVYRLATRGTI 747 Query: 177 DELVLQRLRTKSTIQDLLL 195 ++ +L+R +K ++ L++ Sbjct: 748 EQTLLERAGSKRRLEKLVI 766 >gi|322701606|gb|EFY93355.1| SNF2-family ATP dependent chromatin remodeling factor snf21 [Metarhizium acridum CQMa 102] Length = 1416 Score = 37.0 bits (84), Expect = 1.8, Method: Compositional matrix adjust. Identities = 22/70 (31%), Positives = 37/70 (52%), Gaps = 6/70 (8%) Query: 118 SCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 + G GLNLQ ++++ S W HQ + + R + G K V + LI+ N+++ Sbjct: 926 AGGLGLNLQTADTVIIYDSDW---NPHQDLQAQ---DRAHRIGQKNEVRILRLISSNSVE 979 Query: 178 ELVLQRLRTK 187 E +L+R R K Sbjct: 980 EKILERARFK 989 >gi|229072708|ref|ZP_04205910.1| Helicase, SNF2/RAD54 [Bacillus cereus F65185] gi|229181505|ref|ZP_04308833.1| Helicase, SNF2/RAD54 [Bacillus cereus 172560W] gi|228602080|gb|EEK59573.1| Helicase, SNF2/RAD54 [Bacillus cereus 172560W] gi|228710684|gb|EEL62657.1| Helicase, SNF2/RAD54 [Bacillus cereus F65185] Length = 856 Score = 37.0 bits (84), Expect = 1.8, Method: Compositional matrix adjust. Identities = 26/103 (25%), Positives = 48/103 (46%), Gaps = 7/103 (6%) Query: 95 DKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 D+D I+E+ G + + G GLNL N ++ + WW+ +E Sbjct: 743 DRDKM-IEEFQNGTYDIFILSLKAGGTGLNLTA-ANHVIHYDRWWN-----PAVENQATD 795 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 R + G KR V V+ LI T++E + + L K ++ + ++ + Sbjct: 796 RAYRIGQKRFVHVHKLITTGTLEEKIDEMLERKQSLNNAVITS 838 >gi|224125208|ref|XP_002329920.1| chromatin remodeling complex subunit [Populus trichocarpa] gi|222871157|gb|EEF08288.1| chromatin remodeling complex subunit [Populus trichocarpa] Length = 2332 Score = 37.0 bits (84), Expect = 1.8, Method: Composition-based stats. Identities = 24/97 (24%), Positives = 46/97 (47%), Gaps = 7/97 (7%) Query: 101 IQEWNEGKIPLLFA-HPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQA 159 I +N+ K +F SCG G+NL ++++ S D H + + R + Sbjct: 1123 IARFNQDKSRFVFLLSTRSCGLGINLATADTVIIYDS---DFNPHADIQ---AMNRAHRI 1176 Query: 160 GFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 G + + VY L+ + +++E +LQ + K + L +N Sbjct: 1177 GQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFVN 1213 >gi|149248412|ref|XP_001528593.1| SNF2-family ATP dependent chromatin remodeling factor snf21 [Lodderomyces elongisporus NRRL YB-4239] gi|146448547|gb|EDK42935.1| SNF2-family ATP dependent chromatin remodeling factor snf21 [Lodderomyces elongisporus NRRL YB-4239] Length = 1926 Score = 37.0 bits (84), Expect = 1.8, Method: Compositional matrix adjust. Identities = 23/82 (28%), Positives = 42/82 (51%), Gaps = 6/82 (7%) Query: 118 SCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 + G GLNLQ +++F + W HQ + + R + G K V + LI +++++ Sbjct: 1325 AGGLGLNLQTADTVIIFDTDW---NPHQDLQAQ---DRAHRIGQKNEVRILRLITEDSVE 1378 Query: 178 ELVLQRLRTKSTIQDLLLNALK 199 E++L+R K I ++ A K Sbjct: 1379 EMILERAHAKLEIDGKVIQAGK 1400 >gi|56421797|ref|YP_149115.1| DNA/RNA helicase [Geobacillus kaustophilus HTA426] gi|56381639|dbj|BAD77547.1| DNA/RNA helicase (SNF2 family) [Geobacillus kaustophilus HTA426] Length = 919 Score = 37.0 bits (84), Expect = 1.8, Method: Compositional matrix adjust. Identities = 25/94 (26%), Positives = 42/94 (44%), Gaps = 6/94 (6%) Query: 101 IQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 + E+ K P+ + G GLNL N ++ F WW+ +E R + G Sbjct: 803 VDEFQAKKAPIFLLSLKAGGTGLNLTA-ANHVIHFDRWWN-----PAVENQATDRAYRIG 856 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 + V V+ LI TI+E + + L K + D++ Sbjct: 857 QTKFVHVHKLITTGTIEEKIDEMLEQKQALADVI 890 >gi|322707206|gb|EFY98785.1| SNF2-family ATP dependent chromatin remodeling factor snf21 [Metarhizium anisopliae ARSEF 23] Length = 1416 Score = 37.0 bits (84), Expect = 1.8, Method: Compositional matrix adjust. Identities = 22/70 (31%), Positives = 37/70 (52%), Gaps = 6/70 (8%) Query: 118 SCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 + G GLNLQ ++++ S W HQ + + R + G K V + LI+ N+++ Sbjct: 926 AGGLGLNLQTADTVIIYDSDW---NPHQDLQAQ---DRAHRIGQKNEVRILRLISSNSVE 979 Query: 178 ELVLQRLRTK 187 E +L+R R K Sbjct: 980 EKILERARFK 989 >gi|312068394|ref|XP_003137194.1| BRM protein [Loa loa] gi|307767650|gb|EFO26884.1| BRM protein [Loa loa] Length = 619 Score = 37.0 bits (84), Expect = 1.8, Method: Composition-based stats. Identities = 26/80 (32%), Positives = 39/80 (48%), Gaps = 6/80 (7%) Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 G GLNLQ +++F S W HQ M + R + G R V V L+ N+I+E Sbjct: 189 GLGLNLQTADTVIIFDSDW---NPHQDMQAQ---DRAHRIGQSREVRVLRLVTVNSIEEK 242 Query: 180 VLQRLRTKSTIQDLLLNALK 199 +L R K + + ++ A K Sbjct: 243 ILAAARYKLNVDEKVIQAGK 262 >gi|229082458|ref|ZP_04214921.1| Helicase, SNF2/RAD54 [Bacillus cereus Rock4-2] gi|228700890|gb|EEL53413.1| Helicase, SNF2/RAD54 [Bacillus cereus Rock4-2] Length = 856 Score = 37.0 bits (84), Expect = 1.8, Method: Compositional matrix adjust. Identities = 26/103 (25%), Positives = 48/103 (46%), Gaps = 7/103 (6%) Query: 95 DKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 D+D I+E+ G + + G GLNL N ++ + WW+ +E Sbjct: 743 DRDKM-IEEFQNGTYDIFILSLKAGGTGLNLTA-ANHVIHYDRWWN-----PAVENQATD 795 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 R + G KR V V+ LI T++E + + L K ++ + ++ + Sbjct: 796 RAYRIGQKRFVHVHKLITTGTLEEKIDEMLERKQSLNNAVITS 838 >gi|294659312|ref|XP_461680.2| DEHA2G03102p [Debaryomyces hansenii CBS767] gi|199433866|emb|CAG90128.2| DEHA2G03102p [Debaryomyces hansenii] Length = 1590 Score = 37.0 bits (84), Expect = 1.8, Method: Compositional matrix adjust. Identities = 23/82 (28%), Positives = 42/82 (51%), Gaps = 6/82 (7%) Query: 118 SCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 + G GLNLQ +++F + W HQ + + R + G K V + LI +++++ Sbjct: 1095 AGGLGLNLQTADTVIIFDTDW---NPHQDLQAQ---DRAHRIGQKNEVRILRLITEDSVE 1148 Query: 178 ELVLQRLRTKSTIQDLLLNALK 199 E++L+R K I ++ A K Sbjct: 1149 EMILERAHAKLEIDGKVIQAGK 1170 >gi|67523009|ref|XP_659565.1| hypothetical protein AN1961.2 [Aspergillus nidulans FGSC A4] gi|40745970|gb|EAA65126.1| hypothetical protein AN1961.2 [Aspergillus nidulans FGSC A4] gi|259487320|tpe|CBF85901.1| TPA: SNF2 family helicase, putative (AFU_orthologue; AFUA_4G10830) [Aspergillus nidulans FGSC A4] Length = 1502 Score = 37.0 bits (84), Expect = 1.8, Method: Compositional matrix adjust. Identities = 21/79 (26%), Positives = 39/79 (49%), Gaps = 9/79 (11%) Query: 119 CGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDE 178 HGL++ + + +W Q IE + R + G R VFV L+ ++T+++ Sbjct: 941 ASHGLHIAQASRVYIVNPIW------QPNIESQAIKRAHRIGQTRPVFVETLVLRDTLED 994 Query: 179 LVLQRLRTKSTIQ---DLL 194 +LQR + + ++ DLL Sbjct: 995 KILQRRKAMADVEIQNDLL 1013 >gi|326943035|gb|AEA18931.1| SWF/SNF family helicase [Bacillus thuringiensis serovar chinensis CT-43] Length = 918 Score = 37.0 bits (84), Expect = 1.8, Method: Compositional matrix adjust. Identities = 26/103 (25%), Positives = 48/103 (46%), Gaps = 7/103 (6%) Query: 95 DKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 D+D I+E+ G + + G GLNL N ++ + WW+ +E Sbjct: 805 DRDKM-IEEFQNGTYDIFILSLKAGGTGLNLTA-ANHVIHYDRWWN-----PAVENQATD 857 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 R + G KR V V+ LI T++E + + L K ++ + ++ + Sbjct: 858 RAYRIGQKRFVHVHKLITTGTLEEKIDEMLERKQSLNNAVITS 900 >gi|239828513|ref|YP_002951137.1| non-specific serine/threonine protein kinase [Geobacillus sp. WCH70] gi|239808806|gb|ACS25871.1| Non-specific serine/threonine protein kinase [Geobacillus sp. WCH70] Length = 925 Score = 37.0 bits (84), Expect = 1.8, Method: Compositional matrix adjust. Identities = 25/94 (26%), Positives = 43/94 (45%), Gaps = 6/94 (6%) Query: 101 IQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 ++E+ K P+ + G GLNL N ++ F WW+ +E R + G Sbjct: 809 VEEFQARKAPIFLLSLKAGGTGLNLTA-ANHVIHFDRWWN-----PAVENQATDRAYRIG 862 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 + V V+ LI TI+E + + L K + D++ Sbjct: 863 QTKFVHVHKLITVGTIEEKIDEMLEQKQALADII 896 >gi|228911082|ref|ZP_04074889.1| Helicase, SNF2/RAD54 [Bacillus thuringiensis IBL 200] gi|228848586|gb|EEM93433.1| Helicase, SNF2/RAD54 [Bacillus thuringiensis IBL 200] Length = 856 Score = 37.0 bits (84), Expect = 1.8, Method: Compositional matrix adjust. Identities = 26/103 (25%), Positives = 48/103 (46%), Gaps = 7/103 (6%) Query: 95 DKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 D+D I+E+ G + + G GLNL N ++ + WW+ +E Sbjct: 743 DRDKM-IEEFQNGTYDIFILSLKAGGTGLNLTA-ANHVIHYDRWWN-----PAVENQATD 795 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 R + G KR V V+ LI T++E + + L K ++ + ++ + Sbjct: 796 RAYRIGQKRFVHVHKLITTGTLEEKIDEMLERKQSLNNAVITS 838 >gi|229130493|ref|ZP_04259449.1| Helicase, SNF2/RAD54 [Bacillus cereus BDRD-Cer4] gi|228652832|gb|EEL08714.1| Helicase, SNF2/RAD54 [Bacillus cereus BDRD-Cer4] Length = 856 Score = 37.0 bits (84), Expect = 1.8, Method: Compositional matrix adjust. Identities = 26/103 (25%), Positives = 48/103 (46%), Gaps = 7/103 (6%) Query: 95 DKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 D+D I+E+ G + + G GLNL N ++ + WW+ +E Sbjct: 743 DRDKM-IEEFQNGTYDIFILSLKAGGTGLNLTA-ANHVIHYDRWWN-----PAVENQATD 795 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 R + G KR V V+ LI T++E + + L K ++ + ++ + Sbjct: 796 RAYRIGQKRFVHVHKLITTGTLEEKIDEMLERKQSLNNAVITS 838 >gi|229141981|ref|ZP_04270506.1| Helicase, SNF2/RAD54 [Bacillus cereus BDRD-ST26] gi|228641270|gb|EEK97576.1| Helicase, SNF2/RAD54 [Bacillus cereus BDRD-ST26] Length = 855 Score = 37.0 bits (84), Expect = 1.8, Method: Compositional matrix adjust. Identities = 31/135 (22%), Positives = 59/135 (43%), Gaps = 10/135 (7%) Query: 63 IEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHG 122 I N ++ HF + L + P+ + DK I+++ G + + G G Sbjct: 713 IGMGNMLKDVLEKHFGQRVLFLNGSVPK-KERDK---MIEQFQNGTYDIFILSLKAGGTG 768 Query: 123 LNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQ 182 LNL N ++ + WW+ +E R + G KR V V+ LI T++E + + Sbjct: 769 LNLTA-ANHVIHYDRWWN-----PAVENQATDRAYRIGQKRFVHVHKLITTGTLEEKIDE 822 Query: 183 RLRTKSTIQDLLLNA 197 L K ++ + ++ + Sbjct: 823 MLERKQSLNNAVITS 837 >gi|195395955|ref|XP_002056599.1| GJ10137 [Drosophila virilis] gi|194143308|gb|EDW59711.1| GJ10137 [Drosophila virilis] Length = 1061 Score = 37.0 bits (84), Expect = 1.8, Method: Compositional matrix adjust. Identities = 23/82 (28%), Positives = 43/82 (52%), Gaps = 8/82 (9%) Query: 101 IQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQ 158 + E+N+ + P +L + G GLNL G N L+ F L W+ + Q +RI + Sbjct: 952 VNEFNDERNPKRILLLSLTAGGVGLNL-IGANHLILFDLHWNPQLEAQAQDRI-----YR 1005 Query: 159 AGFKRAVFVYYLIAQNTIDELV 180 G K+ V +Y ++ +T+++ + Sbjct: 1006 VGQKKDVIIYKIVCLDTVEQRI 1027 >gi|24581780|ref|NP_608883.1| Marcal1 [Drosophila melanogaster] gi|75027220|sp|Q9VMX6|SMAL1_DROME RecName: Full=SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1 gi|22945611|gb|AAF52182.2| Marcal1 [Drosophila melanogaster] gi|39752623|gb|AAR30193.1| RE44811p [Drosophila melanogaster] gi|220948472|gb|ACL86779.1| Marcal1-PA [synthetic construct] Length = 755 Score = 37.0 bits (84), Expect = 1.8, Method: Compositional matrix adjust. Identities = 28/94 (29%), Positives = 43/94 (45%), Gaps = 14/94 (14%) Query: 100 TIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWD---LEEHQQMIERIGVTRQ 156 T Q+ + K+ LL +C G+ L I+VF L W+ L + + RIG T+ Sbjct: 580 TFQKKSSCKVALLSLK--ACNSGITLT-AAEIIVFAELDWNPSTLAQAESRAHRIGQTK- 635 Query: 157 RQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 V YLIA NT D+++ L+ K + Sbjct: 636 -------PVICRYLIAHNTADDIIWNMLKNKQEV 662 >gi|46125857|ref|XP_387482.1| hypothetical protein FG07306.1 [Gibberella zeae PH-1] Length = 1427 Score = 37.0 bits (84), Expect = 1.8, Method: Compositional matrix adjust. Identities = 22/70 (31%), Positives = 37/70 (52%), Gaps = 6/70 (8%) Query: 118 SCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 + G GLNLQ ++++ S W HQ + + R + G K V + LI+ N+++ Sbjct: 945 AGGLGLNLQTADTVIIYDSDW---NPHQDLQAQ---DRAHRIGQKNEVRILRLISSNSVE 998 Query: 178 ELVLQRLRTK 187 E +L+R R K Sbjct: 999 EKILERARFK 1008 >gi|49481223|ref|YP_039235.1| SNF2 family helicase [Bacillus thuringiensis serovar konkukian str. 97-27] gi|49332779|gb|AAT63425.1| SNF2 family helicase [Bacillus thuringiensis serovar konkukian str. 97-27] Length = 918 Score = 36.6 bits (83), Expect = 1.9, Method: Compositional matrix adjust. Identities = 31/135 (22%), Positives = 59/135 (43%), Gaps = 10/135 (7%) Query: 63 IEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHG 122 I N ++ HF + L + P+ + DK I+++ G + + G G Sbjct: 776 IGMGNMLKDVLEKHFGQRVLFLNGSVPK-KERDK---MIEQFQNGTYDIFILSLKAGGTG 831 Query: 123 LNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQ 182 LNL N ++ + WW+ +E R + G KR V V+ LI T++E + + Sbjct: 832 LNLTA-ANHVIHYDRWWN-----PAVENQATDRAYRIGQKRFVHVHKLITTGTLEEKIDE 885 Query: 183 RLRTKSTIQDLLLNA 197 L K ++ + ++ + Sbjct: 886 MLERKQSLNNAVITS 900 >gi|290976692|ref|XP_002671073.1| predicted protein [Naegleria gruberi] gi|284084639|gb|EFC38329.1| predicted protein [Naegleria gruberi] Length = 998 Score = 36.6 bits (83), Expect = 1.9, Method: Compositional matrix adjust. Identities = 26/91 (28%), Positives = 43/91 (47%), Gaps = 7/91 (7%) Query: 101 IQEWNEG-KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQA 159 + E+NE KI + G GLNL +++ + + I+ V R + Sbjct: 779 VDEFNENEKIKCFILSSQAGGVGLNLVSASRVIIVDANF------NPSIDEQSVDRCYRI 832 Query: 160 GFKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 G K V VY LI+ TI+E + +R +K+T+ Sbjct: 833 GQKENVIVYRLISAGTIEEYIYKRQVSKTTV 863 >gi|229112656|ref|ZP_04242192.1| Helicase, SNF2/RAD54 [Bacillus cereus Rock1-15] gi|228670788|gb|EEL26096.1| Helicase, SNF2/RAD54 [Bacillus cereus Rock1-15] Length = 856 Score = 36.6 bits (83), Expect = 1.9, Method: Compositional matrix adjust. Identities = 26/103 (25%), Positives = 48/103 (46%), Gaps = 7/103 (6%) Query: 95 DKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 D+D I+E+ G + + G GLNL N ++ + WW+ +E Sbjct: 743 DRDKM-IEEFQNGTYDIFILSLKAGGTGLNLTA-ANHVIHYDRWWN-----PAVENQATD 795 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 R + G KR V V+ LI T++E + + L K ++ + ++ + Sbjct: 796 RAYRIGQKRFVHVHKLITTGTLEEKIDEMLERKQSLNNAVITS 838 >gi|138896831|ref|YP_001127284.1| helicase [Geobacillus thermodenitrificans NG80-2] gi|134268344|gb|ABO68539.1| Helicase, putative [Geobacillus thermodenitrificans NG80-2] Length = 926 Score = 36.6 bits (83), Expect = 1.9, Method: Compositional matrix adjust. Identities = 25/94 (26%), Positives = 42/94 (44%), Gaps = 6/94 (6%) Query: 101 IQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 + E+ K P+ + G GLNL N ++ F WW+ +E R + G Sbjct: 810 VDEFQARKAPIFLLSLKAGGTGLNLTA-ANHVIHFDRWWN-----PAVENQATDRAYRIG 863 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 + V V+ LI TI+E + + L K + D++ Sbjct: 864 QTKFVHVHKLITTGTIEEKIDEMLEQKQALADVI 897 >gi|257052989|ref|YP_003130822.1| helicase domain protein [Halorhabdus utahensis DSM 12940] gi|256691752|gb|ACV12089.1| helicase domain protein [Halorhabdus utahensis DSM 12940] Length = 971 Score = 36.6 bits (83), Expect = 1.9, Method: Composition-based stats. Identities = 26/85 (30%), Positives = 45/85 (52%), Gaps = 6/85 (7%) Query: 103 EWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFK 162 E+N G+ LLFA A+ G++LQ+ +I+ + L W+ +Q I RI + G Sbjct: 531 EFNHGQSRLLFATDAA-SEGIDLQHSCHIMANYELPWNPNRLEQRIGRI-----HRYGQD 584 Query: 163 RAVFVYYLIAQNTIDELVLQRLRTK 187 R V V+ + +T + + + L+TK Sbjct: 585 REVKVWNFLFDDTRESEIFEMLQTK 609 >gi|206970363|ref|ZP_03231316.1| putative helicase [Bacillus cereus AH1134] gi|206734940|gb|EDZ52109.1| putative helicase [Bacillus cereus AH1134] Length = 918 Score = 36.6 bits (83), Expect = 1.9, Method: Compositional matrix adjust. Identities = 26/103 (25%), Positives = 48/103 (46%), Gaps = 7/103 (6%) Query: 95 DKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 D+D I+E+ G + + G GLNL N ++ + WW+ +E Sbjct: 805 DRDKM-IEEFQNGTYDIFILSLKAGGTGLNLTA-ANHVIHYDRWWN-----PAVENQATD 857 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 R + G KR V V+ LI T++E + + L K ++ + ++ + Sbjct: 858 RAYRIGQKRFVHVHKLITTGTLEEKIDEMLERKQSLNNAVITS 900 >gi|229187464|ref|ZP_04314606.1| Helicase, SNF2/RAD54 [Bacillus cereus BGSC 6E1] gi|228595985|gb|EEK53663.1| Helicase, SNF2/RAD54 [Bacillus cereus BGSC 6E1] Length = 855 Score = 36.6 bits (83), Expect = 1.9, Method: Compositional matrix adjust. Identities = 31/135 (22%), Positives = 59/135 (43%), Gaps = 10/135 (7%) Query: 63 IEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHG 122 I N ++ HF + L + P+ + DK I+++ G + + G G Sbjct: 713 IGMGNMLKNVLEEHFGQRVLFLNGSVPK-KERDK---MIEQFQNGTYDIFILSLKAGGTG 768 Query: 123 LNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQ 182 LNL N ++ + WW+ +E R + G KR V V+ LI T++E + + Sbjct: 769 LNLTA-ANHVIHYDRWWN-----PAVENQATDRAYRIGQKRFVHVHKLITTGTLEEKIDE 822 Query: 183 RLRTKSTIQDLLLNA 197 L K ++ + ++ + Sbjct: 823 MLERKQSLNNAVITS 837 >gi|217962731|ref|YP_002341307.1| SNF2 family helicase [Bacillus cereus AH187] gi|222098706|ref|YP_002532764.1| helicase, putative [Bacillus cereus Q1] gi|217063978|gb|ACJ78228.1| SNF2 family helicase [Bacillus cereus AH187] gi|221242765|gb|ACM15475.1| helicase, putative [Bacillus cereus Q1] Length = 918 Score = 36.6 bits (83), Expect = 1.9, Method: Compositional matrix adjust. Identities = 31/135 (22%), Positives = 59/135 (43%), Gaps = 10/135 (7%) Query: 63 IEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHG 122 I N ++ HF + L + P+ + DK I+++ G + + G G Sbjct: 776 IGMGNMLKDVLEKHFGQRVLFLNGSVPK-KERDK---MIEQFQNGTYDIFILSLKAGGTG 831 Query: 123 LNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQ 182 LNL N ++ + WW+ +E R + G KR V V+ LI T++E + + Sbjct: 832 LNLTA-ANHVIHYDRWWN-----PAVENQATDRAYRIGQKRFVHVHKLITTGTLEEKIDE 885 Query: 183 RLRTKSTIQDLLLNA 197 L K ++ + ++ + Sbjct: 886 MLERKQSLNNAVITS 900 >gi|296331256|ref|ZP_06873728.1| putative ATP-binding SNF2 helicase or protein kinase [Bacillus subtilis subsp. spizizenii ATCC 6633] gi|305676243|ref|YP_003867915.1| putative ATP-binding SNF2 helicase or protein kinase [Bacillus subtilis subsp. spizizenii str. W23] gi|296151371|gb|EFG92248.1| putative ATP-binding SNF2 helicase or protein kinase [Bacillus subtilis subsp. spizizenii ATCC 6633] gi|305414487|gb|ADM39606.1| putative ATP-binding SNF2 helicase or protein kinase [Bacillus subtilis subsp. spizizenii str. W23] Length = 922 Score = 36.6 bits (83), Expect = 1.9, Method: Compositional matrix adjust. Identities = 24/97 (24%), Positives = 47/97 (48%), Gaps = 6/97 (6%) Query: 101 IQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 ++++ + + P L + G GLNL N ++ + WW+ +E R + G Sbjct: 809 VEKFQKKEYPTLILSLKAGGTGLNLTA-ANHVIHYDRWWN-----PAVENQATDRAYRIG 862 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 +R V V+ +I TI+E + L +K T+ D ++ + Sbjct: 863 QERFVHVHKMITTGTIEEKIDVMLESKQTLNDQIIQS 899 >gi|196250406|ref|ZP_03149098.1| Non-specific serine/threonine protein kinase [Geobacillus sp. G11MC16] gi|196210065|gb|EDY04832.1| Non-specific serine/threonine protein kinase [Geobacillus sp. G11MC16] Length = 926 Score = 36.6 bits (83), Expect = 1.9, Method: Compositional matrix adjust. Identities = 25/94 (26%), Positives = 42/94 (44%), Gaps = 6/94 (6%) Query: 101 IQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 + E+ K P+ + G GLNL N ++ F WW+ +E R + G Sbjct: 810 VDEFQARKAPIFLLSLKAGGTGLNLTA-ANHVIHFDRWWN-----PAVENQATDRAYRIG 863 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 + V V+ LI TI+E + + L K + D++ Sbjct: 864 QTKFVHVHKLITTGTIEEKIDEMLEQKQALADVI 897 >gi|50294289|ref|XP_449556.1| hypothetical protein [Candida glabrata CBS 138] gi|49528870|emb|CAG62532.1| unnamed protein product [Candida glabrata] Length = 1730 Score = 36.6 bits (83), Expect = 1.9, Method: Compositional matrix adjust. Identities = 24/82 (29%), Positives = 41/82 (50%), Gaps = 6/82 (7%) Query: 118 SCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 + G GLNLQ +++F + W HQ + + R + G K V + LI N+++ Sbjct: 1200 AGGLGLNLQTADTVIIFDTDW---NPHQDLQAQ---DRAHRIGQKNEVRIIRLITTNSVE 1253 Query: 178 ELVLQRLRTKSTIQDLLLNALK 199 E++L+R K I ++ A K Sbjct: 1254 EVILERAYKKLDIDGKVIQAGK 1275 >gi|315048045|ref|XP_003173397.1| ISWI chromatin-remodeling complex ATPase ISW1 [Arthroderma gypseum CBS 118893] gi|311341364|gb|EFR00567.1| ISWI chromatin-remodeling complex ATPase ISW1 [Arthroderma gypseum CBS 118893] Length = 767 Score = 36.6 bits (83), Expect = 2.0, Method: Compositional matrix adjust. Identities = 24/79 (30%), Positives = 40/79 (50%), Gaps = 12/79 (15%) Query: 120 GHGLNLQYGGNILVFFSLW---WDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTI 176 G G+NL +++F S W DL+ Q RIG T+ V VY L + TI Sbjct: 603 GQGINLTAADTVILFDSDWNPQQDLQ-AQDRAHRIGQTK--------PVIVYRLATRGTI 653 Query: 177 DELVLQRLRTKSTIQDLLL 195 ++ +L+R +K ++ L++ Sbjct: 654 EQTLLERAGSKRRLEKLVI 672 >gi|228930248|ref|ZP_04093256.1| Helicase, SNF2/RAD54 [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] gi|228829389|gb|EEM75018.1| Helicase, SNF2/RAD54 [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] Length = 855 Score = 36.6 bits (83), Expect = 2.0, Method: Compositional matrix adjust. Identities = 31/135 (22%), Positives = 59/135 (43%), Gaps = 10/135 (7%) Query: 63 IEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHG 122 I N ++ HF + L + P+ + DK I+++ G + + G G Sbjct: 713 IGMGNMLKNVLEEHFGQRVLFLNGSVPK-KERDK---MIEQFQNGTYDIFILSLKAGGTG 768 Query: 123 LNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQ 182 LNL N ++ + WW+ +E R + G KR V V+ LI T++E + + Sbjct: 769 LNLTA-ANHVIHYDRWWN-----PAVENQATDRAYRIGQKRFVHVHKLITTGTLEEKIDE 822 Query: 183 RLRTKSTIQDLLLNA 197 L K ++ + ++ + Sbjct: 823 MLERKQSLNNAVITS 837 >gi|229158809|ref|ZP_04286867.1| Helicase, SNF2/RAD54 [Bacillus cereus ATCC 4342] gi|228624793|gb|EEK81562.1| Helicase, SNF2/RAD54 [Bacillus cereus ATCC 4342] Length = 855 Score = 36.6 bits (83), Expect = 2.0, Method: Compositional matrix adjust. Identities = 31/135 (22%), Positives = 59/135 (43%), Gaps = 10/135 (7%) Query: 63 IEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHG 122 I N ++ HF + L + P+ + DK I+++ G + + G G Sbjct: 713 IGMGNMLKNVLEEHFGQRVLFLNGSVPK-KERDK---MIEQFQNGTYDIFILSLKAGGTG 768 Query: 123 LNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQ 182 LNL N ++ + WW+ +E R + G KR V V+ LI T++E + + Sbjct: 769 LNLTA-ANHVIHYDRWWN-----PAVENQATDRAYRIGQKRFVHVHKLITTGTLEEKIDE 822 Query: 183 RLRTKSTIQDLLLNA 197 L K ++ + ++ + Sbjct: 823 MLERKQSLNNAVITS 837 >gi|218200306|gb|EEC82733.1| hypothetical protein OsI_27432 [Oryza sativa Indica Group] Length = 1770 Score = 36.6 bits (83), Expect = 2.0, Method: Compositional matrix adjust. Identities = 23/72 (31%), Positives = 36/72 (50%), Gaps = 6/72 (8%) Query: 107 GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVF 166 GK +L A +C G++L G + LV W+ + +Q I R + G +R V+ Sbjct: 1648 GKRKVLIASTTACAEGISLT-GASRLVMLDSEWNHSKTRQAI-----ARAFRRGQERTVY 1701 Query: 167 VYYLIAQNTIDE 178 VY L+A T +E Sbjct: 1702 VYLLVASGTWEE 1713 >gi|218900369|ref|YP_002448780.1| putative helicase [Bacillus cereus G9842] gi|218544351|gb|ACK96745.1| putative helicase [Bacillus cereus G9842] Length = 918 Score = 36.6 bits (83), Expect = 2.0, Method: Compositional matrix adjust. Identities = 26/103 (25%), Positives = 48/103 (46%), Gaps = 7/103 (6%) Query: 95 DKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 D+D I+E+ G + + G GLNL N ++ + WW+ +E Sbjct: 805 DRDKM-IEEFQNGTYDIFILSLKAGGTGLNLTA-ANHVIHYDRWWN-----PAVENQATD 857 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 R + G KR V V+ LI T++E + + L K ++ + ++ + Sbjct: 858 RAYRIGQKRFVHVHKLITTGTLEEKIDEMLERKQSLNNAVITS 900 >gi|296505669|ref|YP_003667369.1| SWF/SNF family helicase [Bacillus thuringiensis BMB171] gi|296326721|gb|ADH09649.1| SWF/SNF family helicase [Bacillus thuringiensis BMB171] Length = 918 Score = 36.6 bits (83), Expect = 2.0, Method: Compositional matrix adjust. Identities = 26/103 (25%), Positives = 48/103 (46%), Gaps = 7/103 (6%) Query: 95 DKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 D+D I+E+ G + + G GLNL N ++ + WW+ +E Sbjct: 805 DRDKM-IEEFQNGTYDIFILSLKAGGTGLNLTA-ANHVIHYDRWWN-----PAVENQATD 857 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 R + G KR V V+ LI T++E + + L K ++ + ++ + Sbjct: 858 RAYRIGQKRFVHVHKLITTGTLEEKIDEMLERKQSLNNAVITS 900 >gi|228917853|ref|ZP_04081390.1| Helicase, SNF2/RAD54 [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] gi|228841789|gb|EEM86899.1| Helicase, SNF2/RAD54 [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] Length = 855 Score = 36.6 bits (83), Expect = 2.0, Method: Compositional matrix adjust. Identities = 31/135 (22%), Positives = 59/135 (43%), Gaps = 10/135 (7%) Query: 63 IEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHG 122 I N ++ HF + L + P+ + DK I+++ G + + G G Sbjct: 713 IGMGNMLKNVLEEHFGQRVLFLNGSVPK-KERDK---MIEQFQNGTYDIFILSLKAGGTG 768 Query: 123 LNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQ 182 LNL N ++ + WW+ +E R + G KR V V+ LI T++E + + Sbjct: 769 LNLTA-ANHVIHYDRWWN-----PAVENQATDRAYRIGQKRFVHVHKLITTGTLEEKIDE 822 Query: 183 RLRTKSTIQDLLLNA 197 L K ++ + ++ + Sbjct: 823 MLERKQSLNNAVITS 837 >gi|206976890|ref|ZP_03237792.1| SNF2 family helicase [Bacillus cereus H3081.97] gi|206744856|gb|EDZ56261.1| SNF2 family helicase [Bacillus cereus H3081.97] Length = 918 Score = 36.6 bits (83), Expect = 2.0, Method: Compositional matrix adjust. Identities = 31/135 (22%), Positives = 59/135 (43%), Gaps = 10/135 (7%) Query: 63 IEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHG 122 I N ++ HF + L + P+ + DK I+++ G + + G G Sbjct: 776 IGMGNMLKDVLEKHFGQRVLFLNGSVPK-KERDK---MIEQFQNGTYDIFILSLKAGGTG 831 Query: 123 LNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQ 182 LNL N ++ + WW+ +E R + G KR V V+ LI T++E + + Sbjct: 832 LNLTA-ANHVIHYDRWWN-----PAVENQATDRAYRIGQKRFVHVHKLITTGTLEEKIDE 885 Query: 183 RLRTKSTIQDLLLNA 197 L K ++ + ++ + Sbjct: 886 MLERKQSLNNAVITS 900 >gi|30023277|ref|NP_834908.1| SWF/SNF family helicase [Bacillus cereus ATCC 14579] gi|29898838|gb|AAP12109.1| SWF/SNF family helicase [Bacillus cereus ATCC 14579] Length = 918 Score = 36.6 bits (83), Expect = 2.0, Method: Compositional matrix adjust. Identities = 26/103 (25%), Positives = 48/103 (46%), Gaps = 7/103 (6%) Query: 95 DKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 D+D I+E+ G + + G GLNL N ++ + WW+ +E Sbjct: 805 DRDKM-IEEFQNGTYDIFILSLKAGGTGLNLTA-ANHVIHYDRWWN-----PAVENQATD 857 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 R + G KR V V+ LI T++E + + L K ++ + ++ + Sbjct: 858 RAYRIGQKRFVHVHKLITTGTLEEKIDEMLERKQSLNNAVITS 900 >gi|332025027|gb|EGI65214.1| Transcription termination factor 2 [Acromyrmex echinatior] Length = 916 Score = 36.6 bits (83), Expect = 2.0, Method: Compositional matrix adjust. Identities = 24/70 (34%), Positives = 36/70 (51%), Gaps = 6/70 (8%) Query: 111 LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYL 170 +L + G GLNL GGN L+ F + W+ + Q +RI + G + V+VY Sbjct: 816 ILLLSLTAGGVGLNL-IGGNHLLLFDIHWNPQLETQAQDRI-----YRFGQTKNVYVYKF 869 Query: 171 IAQNTIDELV 180 I NTI+E + Sbjct: 870 ICVNTIEERI 879 >gi|218233440|ref|YP_002370024.1| putative helicase [Bacillus cereus B4264] gi|218161397|gb|ACK61389.1| putative helicase [Bacillus cereus B4264] Length = 918 Score = 36.6 bits (83), Expect = 2.0, Method: Compositional matrix adjust. Identities = 26/103 (25%), Positives = 48/103 (46%), Gaps = 7/103 (6%) Query: 95 DKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 D+D I+E+ G + + G GLNL N ++ + WW+ +E Sbjct: 805 DRDKM-IEEFQNGTYDIFILSLKAGGTGLNLTA-ANHVIHYDRWWN-----PAVENQATD 857 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 R + G KR V V+ LI T++E + + L K ++ + ++ + Sbjct: 858 RAYRIGQKRFVHVHKLITTGTLEEKIDEMLERKQSLNNAVITS 900 >gi|168061453|ref|XP_001782703.1| SNF2 family DNA-dependent ATPase [Physcomitrella patens subsp. patens] gi|162665796|gb|EDQ52468.1| SNF2 family DNA-dependent ATPase [Physcomitrella patens subsp. patens] Length = 2113 Score = 36.6 bits (83), Expect = 2.0, Method: Composition-based stats. Identities = 21/86 (24%), Positives = 46/86 (53%), Gaps = 12/86 (13%) Query: 120 GHGLNLQYGGNILVF---FSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTI 176 G G+NL ++++ F+ + DL+ R + G + V VY LI + ++ Sbjct: 1277 GLGINLPSADTVIIYDPDFNPFVDLQAQ---------ARAHRIGQRNVVLVYQLITKCSV 1327 Query: 177 DELVLQRLRTKSTIQDLLLNALKKET 202 +E + +R R K +++L++++ +K+T Sbjct: 1328 EEKITERSRQKLAMENLVMSSSEKDT 1353 >gi|229094348|ref|ZP_04225422.1| Helicase, SNF2/RAD54 [Bacillus cereus Rock3-42] gi|228689026|gb|EEL42851.1| Helicase, SNF2/RAD54 [Bacillus cereus Rock3-42] Length = 855 Score = 36.6 bits (83), Expect = 2.0, Method: Compositional matrix adjust. Identities = 31/135 (22%), Positives = 59/135 (43%), Gaps = 10/135 (7%) Query: 63 IEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHG 122 I N ++ HF + L + P+ + DK I+++ G + + G G Sbjct: 713 IGMGNMLKNVLEEHFGQRVLFLNGSVPK-KERDK---MIEQFQNGTYDIFILSLKAGGTG 768 Query: 123 LNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQ 182 LNL N ++ + WW+ +E R + G KR V V+ LI T++E + + Sbjct: 769 LNLTA-ANHVIHYDRWWN-----PAVENQATDRAYRIGQKRFVHVHKLITTGTLEEKIDE 822 Query: 183 RLRTKSTIQDLLLNA 197 L K ++ + ++ + Sbjct: 823 MLERKQSLNNAVITS 837 >gi|225867216|ref|YP_002752594.1| putative helicase [Bacillus cereus 03BB102] gi|225786779|gb|ACO26996.1| putative helicase [Bacillus cereus 03BB102] Length = 918 Score = 36.6 bits (83), Expect = 2.0, Method: Compositional matrix adjust. Identities = 31/135 (22%), Positives = 59/135 (43%), Gaps = 10/135 (7%) Query: 63 IEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHG 122 I N ++ HF + L + P+ + DK I+++ G + + G G Sbjct: 776 IGMGNMLKNVLEEHFGQRVLFLNGSVPK-KERDK---MIEQFQNGTYDIFILSLKAGGTG 831 Query: 123 LNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQ 182 LNL N ++ + WW+ +E R + G KR V V+ LI T++E + + Sbjct: 832 LNLTA-ANHVIHYDRWWN-----PAVENQATDRAYRIGQKRFVHVHKLITTGTLEEKIDE 885 Query: 183 RLRTKSTIQDLLLNA 197 L K ++ + ++ + Sbjct: 886 MLERKQSLNNAVITS 900 >gi|222637735|gb|EEE67867.1| hypothetical protein OsJ_25679 [Oryza sativa Japonica Group] Length = 1390 Score = 36.6 bits (83), Expect = 2.0, Method: Compositional matrix adjust. Identities = 23/72 (31%), Positives = 36/72 (50%), Gaps = 6/72 (8%) Query: 107 GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVF 166 GK +L A +C G++L G + LV W+ + +Q I R + G +R V+ Sbjct: 1268 GKRKVLIASTTACAEGISLT-GASRLVMLDSEWNHSKTRQAI-----ARAFRRGQERTVY 1321 Query: 167 VYYLIAQNTIDE 178 VY L+A T +E Sbjct: 1322 VYLLVASGTWEE 1333 >gi|47219154|emb|CAG01817.1| unnamed protein product [Tetraodon nigroviridis] Length = 1805 Score = 36.6 bits (83), Expect = 2.0, Method: Compositional matrix adjust. Identities = 22/62 (35%), Positives = 34/62 (54%), Gaps = 11/62 (17%) Query: 132 LVFFSLWWDLEEHQQMIER---IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKS 188 ++F+ W+ QQ ++R +G T+Q V VY LI Q TI+E +LQR + KS Sbjct: 1392 VIFYDSDWNPTVDQQAMDRAHRLGQTKQ--------VTVYRLICQGTIEERILQRAKEKS 1443 Query: 189 TI 190 + Sbjct: 1444 EV 1445 >gi|256272521|gb|EEU07500.1| Snf2p [Saccharomyces cerevisiae JAY291] Length = 1706 Score = 36.6 bits (83), Expect = 2.0, Method: Compositional matrix adjust. Identities = 24/82 (29%), Positives = 41/82 (50%), Gaps = 6/82 (7%) Query: 118 SCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 + G GLNLQ +++F + W HQ + + R + G K V + LI N+++ Sbjct: 1168 AGGLGLNLQTADTVIIFDTDW---NPHQDLQAQ---DRAHRIGQKNEVRILRLITTNSVE 1221 Query: 178 ELVLQRLRTKSTIQDLLLNALK 199 E++L+R K I ++ A K Sbjct: 1222 EVILERAYKKLDIDGKVIQAGK 1243 >gi|151945372|gb|EDN63615.1| transcriptional regulator [Saccharomyces cerevisiae YJM789] Length = 1706 Score = 36.6 bits (83), Expect = 2.0, Method: Compositional matrix adjust. Identities = 24/82 (29%), Positives = 41/82 (50%), Gaps = 6/82 (7%) Query: 118 SCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 + G GLNLQ +++F + W HQ + + R + G K V + LI N+++ Sbjct: 1168 AGGLGLNLQTADTVIIFDTDW---NPHQDLQAQ---DRAHRIGQKNEVRILRLITTNSVE 1221 Query: 178 ELVLQRLRTKSTIQDLLLNALK 199 E++L+R K I ++ A K Sbjct: 1222 EVILERAYKKLDIDGKVIQAGK 1243 >gi|30265272|ref|NP_847649.1| helicase, putative [Bacillus anthracis str. Ames] gi|47530804|ref|YP_022153.1| helicase [Bacillus anthracis str. 'Ames Ancestor'] gi|49188082|ref|YP_031335.1| helicase [Bacillus anthracis str. Sterne] gi|65317216|ref|ZP_00390175.1| COG0553: Superfamily II DNA/RNA helicases, SNF2 family [Bacillus anthracis str. A2012] gi|165870042|ref|ZP_02214699.1| putative helicase [Bacillus anthracis str. A0488] gi|167636534|ref|ZP_02394830.1| putative helicase [Bacillus anthracis str. A0442] gi|167641825|ref|ZP_02400066.1| putative helicase [Bacillus anthracis str. A0193] gi|170689422|ref|ZP_02880614.1| putative helicase [Bacillus anthracis str. A0465] gi|170708948|ref|ZP_02899380.1| putative helicase [Bacillus anthracis str. A0389] gi|177654075|ref|ZP_02936085.1| putative helicase [Bacillus anthracis str. A0174] gi|190567743|ref|ZP_03020655.1| putative helicase [Bacillus anthracis Tsiankovskii-I] gi|227818007|ref|YP_002818016.1| putative helicase [Bacillus anthracis str. CDC 684] gi|229602583|ref|YP_002869461.1| putative helicase [Bacillus anthracis str. A0248] gi|254686332|ref|ZP_05150191.1| putative helicase [Bacillus anthracis str. CNEVA-9066] gi|254735172|ref|ZP_05192881.1| putative helicase [Bacillus anthracis str. Western North America USA6153] gi|254737051|ref|ZP_05194756.1| putative helicase [Bacillus anthracis str. Western North America USA6153] gi|254744378|ref|ZP_05202058.1| putative helicase [Bacillus anthracis str. Kruger B] gi|254755680|ref|ZP_05207713.1| putative helicase [Bacillus anthracis str. Vollum] gi|254759588|ref|ZP_05211613.1| putative helicase [Bacillus anthracis str. Australia 94] gi|30259950|gb|AAP29135.1| putative helicase [Bacillus anthracis str. Ames] gi|47505952|gb|AAT34628.1| putative helicase [Bacillus anthracis str. 'Ames Ancestor'] gi|49182009|gb|AAT57385.1| helicase, putative [Bacillus anthracis str. Sterne] gi|164714365|gb|EDR19885.1| putative helicase [Bacillus anthracis str. A0488] gi|167510237|gb|EDR85642.1| putative helicase [Bacillus anthracis str. A0193] gi|167528066|gb|EDR90866.1| putative helicase [Bacillus anthracis str. A0442] gi|170126113|gb|EDS95008.1| putative helicase [Bacillus anthracis str. A0389] gi|170666649|gb|EDT17420.1| putative helicase [Bacillus anthracis str. A0465] gi|172080958|gb|EDT66037.1| putative helicase [Bacillus anthracis str. A0174] gi|190561159|gb|EDV15132.1| putative helicase [Bacillus anthracis Tsiankovskii-I] gi|227003185|gb|ACP12928.1| putative helicase [Bacillus anthracis str. CDC 684] gi|229266991|gb|ACQ48628.1| putative helicase [Bacillus anthracis str. A0248] Length = 918 Score = 36.6 bits (83), Expect = 2.0, Method: Compositional matrix adjust. Identities = 31/135 (22%), Positives = 59/135 (43%), Gaps = 10/135 (7%) Query: 63 IEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHG 122 I N ++ HF + L + P+ + DK I+++ G + + G G Sbjct: 776 IGMGNMLKNVLEEHFGQRVLFLNGSVPK-KERDK---MIEQFQNGTYDIFILSLKAGGTG 831 Query: 123 LNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQ 182 LNL N ++ + WW+ +E R + G KR V V+ LI T++E + + Sbjct: 832 LNLTA-ANHVIHYDRWWN-----PAVENQATDRAYRIGQKRFVHVHKLITTGTLEEKIDE 885 Query: 183 RLRTKSTIQDLLLNA 197 L K ++ + ++ + Sbjct: 886 MLERKQSLNNAVITS 900 >gi|324329191|gb|ADY24451.1| helicase, putative [Bacillus thuringiensis serovar finitimus YBT-020] Length = 918 Score = 36.6 bits (83), Expect = 2.0, Method: Compositional matrix adjust. Identities = 31/135 (22%), Positives = 59/135 (43%), Gaps = 10/135 (7%) Query: 63 IEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHG 122 I N ++ HF + L + P+ + DK I+++ G + + G G Sbjct: 776 IGMGNMLKDVLEKHFGQRVLFLNGSVPK-KERDK---MIEQFQNGTYDIFILSLKAGGTG 831 Query: 123 LNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQ 182 LNL N ++ + WW+ +E R + G KR V V+ LI T++E + + Sbjct: 832 LNLTA-ANHVIHYDRWWN-----PAVENQATDRAYRIGQKRFVHVHKLITTGTLEEKIDE 885 Query: 183 RLRTKSTIQDLLLNA 197 L K ++ + ++ + Sbjct: 886 MLERKQSLNNAVITS 900 >gi|313499735|gb|ADR61101.1| Non-specific serine/threonine protein kinase [Pseudomonas putida BIRD-1] Length = 1110 Score = 36.6 bits (83), Expect = 2.0, Method: Compositional matrix adjust. Identities = 26/107 (24%), Positives = 50/107 (46%), Gaps = 7/107 (6%) Query: 91 GRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 G T D+ +Q++ +G+ + + G GLNL + ++ F WW+ Q +R Sbjct: 980 GDTRDRR-TPVQQFQQGESEVFLISLKAGGVGLNLTA-ADTVIHFDPWWNPASENQATDR 1037 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + G + VFV+ LI + T++E + + K+ + LL+ Sbjct: 1038 A-----YRIGQDKPVFVFKLITRGTVEEKIQLLQQEKAALAASLLDG 1079 >gi|228948966|ref|ZP_04111239.1| Helicase, SNF2/RAD54 [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] gi|228810722|gb|EEM57070.1| Helicase, SNF2/RAD54 [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] Length = 855 Score = 36.6 bits (83), Expect = 2.0, Method: Compositional matrix adjust. Identities = 31/135 (22%), Positives = 59/135 (43%), Gaps = 10/135 (7%) Query: 63 IEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHG 122 I N ++ HF + L + P+ + DK I+++ G + + G G Sbjct: 713 IGMGNMLKNVLEEHFGQRVLFLNGSVPK-KERDK---MIEQFQNGTYDIFILSLKAGGTG 768 Query: 123 LNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQ 182 LNL N ++ + WW+ +E R + G KR V V+ LI T++E + + Sbjct: 769 LNLTA-ANHVIHYDRWWN-----PAVENQATDRAYRIGQKRFVHVHKLITTGTLEEKIDE 822 Query: 183 RLRTKSTIQDLLLNA 197 L K ++ + ++ + Sbjct: 823 MLERKQSLNNAVITS 837 >gi|190407590|gb|EDV10857.1| transcription regulatory protein SNF2 [Saccharomyces cerevisiae RM11-1a] Length = 1706 Score = 36.6 bits (83), Expect = 2.0, Method: Compositional matrix adjust. Identities = 24/82 (29%), Positives = 41/82 (50%), Gaps = 6/82 (7%) Query: 118 SCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 + G GLNLQ +++F + W HQ + + R + G K V + LI N+++ Sbjct: 1168 AGGLGLNLQTADTVIIFDTDW---NPHQDLQAQ---DRAHRIGQKNEVRILRLITTNSVE 1221 Query: 178 ELVLQRLRTKSTIQDLLLNALK 199 E++L+R K I ++ A K Sbjct: 1222 EVILERAYKKLDIDGKVIQAGK 1243 >gi|228213|prf||1718318A GAM1 gene Length = 1703 Score = 36.6 bits (83), Expect = 2.0, Method: Compositional matrix adjust. Identities = 24/82 (29%), Positives = 41/82 (50%), Gaps = 6/82 (7%) Query: 118 SCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 + G GLNLQ +++F + W HQ + + R + G K V + LI N+++ Sbjct: 1165 AGGLGLNLQTADTVIIFDTDW---NPHQDLQAQ---DRAHRIGQKNEVRILRLITTNSVE 1218 Query: 178 ELVLQRLRTKSTIQDLLLNALK 199 E++L+R K I ++ A K Sbjct: 1219 EVILERAYKKLDIDGKVIQAGK 1240 >gi|291486201|dbj|BAI87276.1| hypothetical protein BSNT_05537 [Bacillus subtilis subsp. natto BEST195] Length = 922 Score = 36.6 bits (83), Expect = 2.1, Method: Compositional matrix adjust. Identities = 24/97 (24%), Positives = 46/97 (47%), Gaps = 6/97 (6%) Query: 101 IQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 ++++ + P L + G GLNL N ++ + WW+ +E R + G Sbjct: 809 VEKFQRKEYPTLILSLKAGGTGLNLTA-ANHVIHYDRWWN-----PAVENQATDRAYRIG 862 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 +R V V+ +I TI+E + L +K T+ D ++ + Sbjct: 863 QERFVHVHKMITTGTIEEKIDVMLESKQTLNDQIIQS 899 >gi|316972508|gb|EFV56185.1| domain protein, SNF2 family [Trichinella spiralis] Length = 1052 Score = 36.6 bits (83), Expect = 2.1, Method: Compositional matrix adjust. Identities = 25/82 (30%), Positives = 40/82 (48%), Gaps = 6/82 (7%) Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 G GLNL GGN L L W+ + Q +RI + G R V +Y + TI+E Sbjct: 940 GVGLNL-TGGNHLFLMDLHWNPAQELQASDRIN-----RIGQTRDVVIYKTVCSGTIEEK 993 Query: 180 VLQRLRTKSTIQDLLLNALKKE 201 VL+ K + + +L+ + ++ Sbjct: 994 VLKLQEEKLALAESVLSGVARQ 1015 >gi|302309194|ref|NP_986455.2| AGL212Wp [Ashbya gossypii ATCC 10895] gi|299788244|gb|AAS54279.2| AGL212Wp [Ashbya gossypii ATCC 10895] Length = 903 Score = 36.6 bits (83), Expect = 2.1, Method: Composition-based stats. Identities = 25/79 (31%), Positives = 37/79 (46%), Gaps = 6/79 (7%) Query: 118 SCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 S G GLNL G + L+ F W+ Q + RI + G K+ F+Y L+ ID Sbjct: 695 SGGVGLNL-VGASRLILFDNDWNPSVDLQAMSRI-----HRDGQKKPCFIYRLVTTGCID 748 Query: 178 ELVLQRLRTKSTIQDLLLN 196 E + QR K+ + L+ Sbjct: 749 EKIFQRQLMKNNLSKKFLD 767 >gi|190348672|gb|EDK41171.2| hypothetical protein PGUG_05269 [Meyerozyma guilliermondii ATCC 6260] Length = 593 Score = 36.6 bits (83), Expect = 2.1, Method: Compositional matrix adjust. Identities = 24/82 (29%), Positives = 42/82 (51%), Gaps = 6/82 (7%) Query: 118 SCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 + G GLNLQ +++F S W HQ + + R + G K V + LI +++++ Sbjct: 389 AGGLGLNLQTADTVIIFDSDW---NPHQDLQAQ---DRAHRIGQKNEVRIIRLITEDSVE 442 Query: 178 ELVLQRLRTKSTIQDLLLNALK 199 E++L+R K I ++ A K Sbjct: 443 EMILERAHAKLEIDGKVIQAGK 464 >gi|170760693|ref|YP_001787071.1| Snf2/Rad54 family helicase [Clostridium botulinum A3 str. Loch Maree] gi|169407682|gb|ACA56093.1| helicase, SNF2/RAD54 family [Clostridium botulinum A3 str. Loch Maree] Length = 1077 Score = 36.6 bits (83), Expect = 2.1, Method: Composition-based stats. Identities = 23/78 (29%), Positives = 39/78 (50%), Gaps = 6/78 (7%) Query: 101 IQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 ++++N GK + + G GLNL +I++ F WW+ +E R + G Sbjct: 965 VKDFNNGKGDIFLISLKAGGTGLNLT-SADIVIHFDPWWN-----PAVEDQASDRAHRIG 1018 Query: 161 FKRAVFVYYLIAQNTIDE 178 K+ V + LIA+ TI+E Sbjct: 1019 QKKTVEIIRLIAKGTIEE 1036 >gi|146412556|ref|XP_001482249.1| hypothetical protein PGUG_05269 [Meyerozyma guilliermondii ATCC 6260] Length = 593 Score = 36.6 bits (83), Expect = 2.1, Method: Compositional matrix adjust. Identities = 24/82 (29%), Positives = 42/82 (51%), Gaps = 6/82 (7%) Query: 118 SCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 + G GLNLQ +++F S W HQ + + R + G K V + LI +++++ Sbjct: 389 AGGLGLNLQTADTVIIFDSDW---NPHQDLQAQ---DRAHRIGQKNEVRIIRLITEDSVE 442 Query: 178 ELVLQRLRTKSTIQDLLLNALK 199 E++L+R K I ++ A K Sbjct: 443 EMILERAHAKLEIDGKVIQAGK 464 >gi|254724328|ref|ZP_05186112.1| putative helicase [Bacillus anthracis str. A1055] Length = 918 Score = 36.6 bits (83), Expect = 2.1, Method: Compositional matrix adjust. Identities = 31/135 (22%), Positives = 59/135 (43%), Gaps = 10/135 (7%) Query: 63 IEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHG 122 I N ++ HF + L + P+ + DK I+++ G + + G G Sbjct: 776 IGMGNMLKNVLEEHFGQRVLFLNGSVPK-KERDK---MIEQFQNGTYDIFILSLKAGGTG 831 Query: 123 LNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQ 182 LNL N ++ + WW+ +E R + G KR V V+ LI T++E + + Sbjct: 832 LNLTA-ANHVIHYDRWWN-----PAVENQATDRAYRIGQKRFVHVHKLITTGTLEEKIDE 885 Query: 183 RLRTKSTIQDLLLNA 197 L K ++ + ++ + Sbjct: 886 MLERKQSLNNAVITS 900 >gi|260806897|ref|XP_002598320.1| hypothetical protein BRAFLDRAFT_204851 [Branchiostoma floridae] gi|229283592|gb|EEN54332.1| hypothetical protein BRAFLDRAFT_204851 [Branchiostoma floridae] Length = 490 Score = 36.6 bits (83), Expect = 2.1, Method: Compositional matrix adjust. Identities = 23/71 (32%), Positives = 36/71 (50%), Gaps = 6/71 (8%) Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 G G+NL G N ++ F W+ Q I R+ + G + VFVY +AQ T++E Sbjct: 394 GLGINL-VGANRVIIFDASWNPSHDVQSIFRV-----YRFGQGKPVFVYRFLAQGTMEEK 447 Query: 180 VLQRLRTKSTI 190 + R TK ++ Sbjct: 448 IYDRQVTKQSL 458 >gi|6324864|ref|NP_014933.1| Snf2p [Saccharomyces cerevisiae S288c] gi|134589|sp|P22082|SNF2_YEAST RecName: Full=Transcription regulatory protein SNF2; AltName: Full=ATP-dependent helicase SNF2; AltName: Full=Regulatory protein GAM1; AltName: Full=Regulatory protein SWI2; AltName: Full=SWI/SNF complex component SNF2; AltName: Full=Transcription factor TYE3 gi|4500|emb|CAA40969.1| GAM1/SNF2 protein [Saccharomyces cerevisiae] gi|172632|gb|AAA35059.1| SNF2protein [Saccharomyces cerevisiae] gi|806532|dbj|BAA14423.1| RIC1 [Saccharomyces cerevisiae] gi|1279713|emb|CAA61793.1| regulatory protein gam1 [Saccharomyces cerevisiae] gi|1420644|emb|CAA99517.1| SNF2 [Saccharomyces cerevisiae] gi|285815161|tpg|DAA11054.1| TPA: Snf2p [Saccharomyces cerevisiae S288c] Length = 1703 Score = 36.6 bits (83), Expect = 2.1, Method: Compositional matrix adjust. Identities = 24/82 (29%), Positives = 41/82 (50%), Gaps = 6/82 (7%) Query: 118 SCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 + G GLNLQ +++F + W HQ + + R + G K V + LI N+++ Sbjct: 1165 AGGLGLNLQTADTVIIFDTDW---NPHQDLQAQ---DRAHRIGQKNEVRILRLITTNSVE 1218 Query: 178 ELVLQRLRTKSTIQDLLLNALK 199 E++L+R K I ++ A K Sbjct: 1219 EVILERAYKKLDIDGKVIQAGK 1240 >gi|307107878|gb|EFN56119.1| hypothetical protein CHLNCDRAFT_144734 [Chlorella variabilis] Length = 1822 Score = 36.6 bits (83), Expect = 2.1, Method: Composition-based stats. Identities = 20/82 (24%), Positives = 43/82 (52%), Gaps = 6/82 (7%) Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 G G+NL ++++ S W H + + R + G V VY L+A+ T++E Sbjct: 699 GLGINLATADTVVLYDSDW---NPHNDLQAQ---ARAHRLGQSSGVMVYRLVARATVEER 752 Query: 180 VLQRLRTKSTIQDLLLNALKKE 201 ++QR + K ++ +++ +K++ Sbjct: 753 MMQRAKGKLVLEHVVVRKMKRQ 774 >gi|229124753|ref|ZP_04253933.1| Helicase, SNF2/RAD54 [Bacillus cereus 95/8201] gi|228658730|gb|EEL14390.1| Helicase, SNF2/RAD54 [Bacillus cereus 95/8201] Length = 855 Score = 36.6 bits (83), Expect = 2.1, Method: Compositional matrix adjust. Identities = 31/135 (22%), Positives = 59/135 (43%), Gaps = 10/135 (7%) Query: 63 IEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHG 122 I N ++ HF + L + P+ + DK I+++ G + + G G Sbjct: 713 IGMGNMLKNVLEEHFGQRVLFLNGSVPK-KERDK---MIEQFQNGTYDIFILSLKAGGTG 768 Query: 123 LNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQ 182 LNL N ++ + WW+ +E R + G KR V V+ LI T++E + + Sbjct: 769 LNLTA-ANHVIHYDRWWN-----PAVENQATDRAYRIGQKRFVHVHKLITTGTLEEKIDE 822 Query: 183 RLRTKSTIQDLLLNA 197 L K ++ + ++ + Sbjct: 823 MLERKQSLNNAVITS 837 >gi|207340928|gb|EDZ69127.1| YOR290Cp-like protein [Saccharomyces cerevisiae AWRI1631] Length = 824 Score = 36.6 bits (83), Expect = 2.1, Method: Compositional matrix adjust. Identities = 24/82 (29%), Positives = 41/82 (50%), Gaps = 6/82 (7%) Query: 118 SCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 + G GLNLQ +++F + W HQ + + R + G K V + LI N+++ Sbjct: 286 AGGLGLNLQTADTVIIFDTDW---NPHQDLQAQ---DRAHRIGQKNEVRILRLITTNSVE 339 Query: 178 ELVLQRLRTKSTIQDLLLNALK 199 E++L+R K I ++ A K Sbjct: 340 EVILERAYKKLDIDGKVIQAGK 361 >gi|16080681|ref|NP_391509.1| ATP-binding SNF2 helicase or protein kinase [Bacillus subtilis subsp. subtilis str. 168] gi|221311584|ref|ZP_03593431.1| hypothetical protein Bsubs1_19616 [Bacillus subtilis subsp. subtilis str. 168] gi|221315911|ref|ZP_03597716.1| hypothetical protein BsubsN3_19532 [Bacillus subtilis subsp. subtilis str. NCIB 3610] gi|221320824|ref|ZP_03602118.1| hypothetical protein BsubsJ_19485 [Bacillus subtilis subsp. subtilis str. JH642] gi|221325110|ref|ZP_03606404.1| hypothetical protein BsubsS_19646 [Bacillus subtilis subsp. subtilis str. SMY] gi|81345827|sp|P94593|YWQA_BACSU RecName: Full=Uncharacterized ATP-dependent helicase ywqA gi|2636153|emb|CAB15645.1| putative ATP-binding SNF2 helicase or protein kinase [Bacillus subtilis subsp. subtilis str. 168] Length = 922 Score = 36.6 bits (83), Expect = 2.1, Method: Compositional matrix adjust. Identities = 24/97 (24%), Positives = 46/97 (47%), Gaps = 6/97 (6%) Query: 101 IQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 ++++ + P L + G GLNL N ++ + WW+ +E R + G Sbjct: 809 VEKFQRKEYPTLILSLKAGGTGLNLTA-ANHVIHYDRWWN-----PAVENQATDRAYRIG 862 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 +R V V+ +I TI+E + L +K T+ D ++ + Sbjct: 863 QERFVHVHKMITTGTIEEKIDVMLESKQTLNDQIIQS 899 >gi|327198375|ref|YP_004306949.1| putative ATP-dependent helicase [Streptococcus phage Dp-1] gi|314912677|gb|ADT64068.1| putative ATP-dependent helicase [Streptococcus phage Dp-1] Length = 545 Score = 36.6 bits (83), Expect = 2.1, Method: Compositional matrix adjust. Identities = 25/107 (23%), Positives = 44/107 (41%), Gaps = 6/107 (5%) Query: 91 GRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 G T DK + N K ++ + G G L ++ S W E+ Q Sbjct: 429 GETADKFNEIEEFMNHRKASVILGTIGALGTGFTLTKADTVIFLDSPWTRAEKDQ----- 483 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 R + G K +V +Y L+A+ T+DE + + K + D +++ Sbjct: 484 -AEDRCHRIGAKSSVTIYTLVAKGTVDERIEDLIERKGELADYIVDG 529 >gi|291548670|emb|CBL24932.1| Superfamily II DNA/RNA helicases, SNF2 family [Ruminococcus torques L2-14] Length = 451 Score = 36.6 bits (83), Expect = 2.1, Method: Compositional matrix adjust. Identities = 36/156 (23%), Positives = 69/156 (44%), Gaps = 24/156 (15%) Query: 52 HDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQ----GRTLDKDPCTIQEWNEG 107 H EK++ L ++E + +I+ Y+F ++L +QK ++ + +++ Sbjct: 305 HKEKLEGLRDLVE-STEDRLIIFYNFTAELEAMQKKLADLNRPYSVVNGSKKDLTAYDQA 363 Query: 108 KIPLLFAHPASCGHGLNLQYGGNILVFFSL--------WWDLEEHQQMIERIGVTRQRQA 159 + F + G N Q N +++F+L W E+ ++ I RIG QA Sbjct: 364 DDSITFIQYQAGAMGGNYQ-KANKIIYFTLPLGKGSCDMW--EQSKKRIHRIG-----QA 415 Query: 160 GFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 + F YYL+ + T++E L L+ + D L Sbjct: 416 ---KPCFYYYLLVKGTVEERNLAALKEGKELTDELF 448 >gi|211997720|gb|ACJ14806.1| putative phage-associated helicase [Candidatus Hamiltonella defensa] Length = 69 Score = 36.6 bits (83), Expect = 2.1, Method: Compositional matrix adjust. Identities = 19/48 (39%), Positives = 29/48 (60%) Query: 154 TRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 R + G R VF+++L+ ++ID VL+ L K Q LL+ALKK+ Sbjct: 3 ARLHRQGQTRPVFIHHLVMNDSIDITVLEALENKHINQKALLDALKKD 50 >gi|196036261|ref|ZP_03103659.1| putative helicase [Bacillus cereus W] gi|218906422|ref|YP_002454256.1| putative helicase [Bacillus cereus AH820] gi|195991053|gb|EDX55023.1| putative helicase [Bacillus cereus W] gi|218539910|gb|ACK92308.1| putative helicase [Bacillus cereus AH820] Length = 918 Score = 36.6 bits (83), Expect = 2.1, Method: Compositional matrix adjust. Identities = 31/135 (22%), Positives = 59/135 (43%), Gaps = 10/135 (7%) Query: 63 IEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHG 122 I N ++ HF + L + P+ + DK I+++ G + + G G Sbjct: 776 IGMGNMLKNVLEEHFGQRVLFLNGSVPK-KERDK---MIEQFQNGTYDIFILSLKAGGTG 831 Query: 123 LNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQ 182 LNL N ++ + WW+ +E R + G KR V V+ LI T++E + + Sbjct: 832 LNLTA-ANHVIHYDRWWN-----PAVENQATDRAYRIGQKRFVHVHKLITTGTLEEKIDE 885 Query: 183 RLRTKSTIQDLLLNA 197 L K ++ + ++ + Sbjct: 886 MLERKQSLNNAVITS 900 >gi|47569742|ref|ZP_00240415.1| helicase, SNF2/RAD54 family [Bacillus cereus G9241] gi|47553593|gb|EAL11971.1| helicase, SNF2/RAD54 family [Bacillus cereus G9241] Length = 918 Score = 36.6 bits (83), Expect = 2.1, Method: Compositional matrix adjust. Identities = 31/135 (22%), Positives = 59/135 (43%), Gaps = 10/135 (7%) Query: 63 IEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHG 122 I N ++ HF + L + P+ + DK I+++ G + + G G Sbjct: 776 IGMGNMLKNVLEEHFGQRVLFLNGSVPK-KERDK---MIEQFQNGTYDIFILSLKAGGTG 831 Query: 123 LNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQ 182 LNL N ++ + WW+ +E R + G KR V V+ LI T++E + + Sbjct: 832 LNLTA-ANHVIHYDRWWN-----PAVENQATDRAYRIGQKRFVHVHKLITTGTLEEKIDE 885 Query: 183 RLRTKSTIQDLLLNA 197 L K ++ + ++ + Sbjct: 886 MLERKQSLNNAVITS 900 >gi|328869586|gb|EGG17963.1| SNF2-related domain-containing protein [Dictyostelium fasciculatum] Length = 1429 Score = 36.6 bits (83), Expect = 2.1, Method: Compositional matrix adjust. Identities = 27/97 (27%), Positives = 47/97 (48%), Gaps = 7/97 (7%) Query: 100 TIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQA 159 T Q N G+ +L + G GLNL +++V WW+ Q I+R+ + Sbjct: 1273 TFQTTN-GEPRILLISLKAGGVGLNLTRANHVIVL-DPWWNSSAEDQAIDRV-----HRI 1325 Query: 160 GFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 G + V+V + Q +I+E VL+ R K ++ +L+ Sbjct: 1326 GQLKHVYVKKYVIQASIEERVLELQRAKESMTKAILD 1362 >gi|321313173|ref|YP_004205460.1| putative ATP-binding SNF2 helicase or protein kinase [Bacillus subtilis BSn5] gi|320019447|gb|ADV94433.1| putative ATP-binding SNF2 helicase or protein kinase [Bacillus subtilis BSn5] Length = 922 Score = 36.6 bits (83), Expect = 2.1, Method: Compositional matrix adjust. Identities = 24/97 (24%), Positives = 46/97 (47%), Gaps = 6/97 (6%) Query: 101 IQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 ++++ + P L + G GLNL N ++ + WW+ +E R + G Sbjct: 809 VEKFQRKEYPTLILSLKAGGTGLNLTA-ANHVIHYDRWWN-----PAVENQATDRAYRIG 862 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 +R V V+ +I TI+E + L +K T+ D ++ + Sbjct: 863 QERFVHVHKMITTGTIEEKIDVMLESKQTLNDQIIQS 899 >gi|242045708|ref|XP_002460725.1| hypothetical protein SORBIDRAFT_02g033850 [Sorghum bicolor] gi|241924102|gb|EER97246.1| hypothetical protein SORBIDRAFT_02g033850 [Sorghum bicolor] Length = 614 Score = 36.6 bits (83), Expect = 2.1, Method: Compositional matrix adjust. Identities = 24/99 (24%), Positives = 45/99 (45%), Gaps = 7/99 (7%) Query: 99 CTIQEWNEGKIPLLFA-HPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 I +N+ K +F SCG G+NL ++++ S D H + + R Sbjct: 348 AAIARFNQDKTRFVFLLSTRSCGLGINLATADTVIIYDS---DFNPHADIQ---AMNRAH 401 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + G + VY L+ + +++E +LQ + K + L +N Sbjct: 402 RIGQSNRLLVYRLVVRASVEERILQLAKKKLMLDQLFVN 440 >gi|134288423|ref|YP_001110586.1| SNF2-related protein [Burkholderia vietnamiensis G4] gi|134133073|gb|ABO59783.1| SNF2-related protein [Burkholderia vietnamiensis G4] Length = 948 Score = 36.6 bits (83), Expect = 2.1, Method: Composition-based stats. Identities = 22/95 (23%), Positives = 43/95 (45%), Gaps = 6/95 (6%) Query: 102 QEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGF 161 + + ++PLL G G NL + ++ + WW+ Q ++R + G Sbjct: 824 ERFQNQEVPLLLCTLKVGGVGHNLT-AADTVILYDPWWNPAAENQAMDR-----AHRIGQ 877 Query: 162 KRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 +A+FVY LI +I+E ++ K + +L+ Sbjct: 878 TKALFVYKLIMAGSIEERIVAMQERKDALMKAILD 912 >gi|310791654|gb|EFQ27181.1| SNF2 family domain-containing protein [Glomerella graminicola M1.001] Length = 1458 Score = 36.6 bits (83), Expect = 2.2, Method: Compositional matrix adjust. Identities = 22/70 (31%), Positives = 37/70 (52%), Gaps = 6/70 (8%) Query: 118 SCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 + G GLNLQ ++++ S W HQ + + R + G K V + LI+ N+++ Sbjct: 963 AGGLGLNLQTADTVIIYDSDW---NPHQDLQAQ---DRAHRIGQKNEVRILRLISSNSVE 1016 Query: 178 ELVLQRLRTK 187 E +L+R R K Sbjct: 1017 EKILERARFK 1026 >gi|52140319|ref|YP_086511.1| SNF2 family helicase [Bacillus cereus E33L] gi|51973788|gb|AAU15338.1| SNF2 family helicase [Bacillus cereus E33L] Length = 918 Score = 36.6 bits (83), Expect = 2.2, Method: Compositional matrix adjust. Identities = 31/135 (22%), Positives = 59/135 (43%), Gaps = 10/135 (7%) Query: 63 IEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHG 122 I N ++ HF + L + P+ + DK I+++ G + + G G Sbjct: 776 IGMGNMLKNVLEEHFGQRVLFLNGSVPK-KERDK---MIEQFQNGTYDIFILSLKAGGTG 831 Query: 123 LNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQ 182 LNL N ++ + WW+ +E R + G KR V V+ LI T++E + + Sbjct: 832 LNLTA-ANHVIHYDRWWN-----PAVENQATDRAYRIGQKRFVHVHKLITTGTLEEKIDE 885 Query: 183 RLRTKSTIQDLLLNA 197 L K ++ + ++ + Sbjct: 886 MLERKQSLNNAVITS 900 >gi|42784409|ref|NP_981656.1| helicase, putative [Bacillus cereus ATCC 10987] gi|42740341|gb|AAS44264.1| helicase, putative [Bacillus cereus ATCC 10987] Length = 918 Score = 36.6 bits (83), Expect = 2.2, Method: Compositional matrix adjust. Identities = 31/135 (22%), Positives = 59/135 (43%), Gaps = 10/135 (7%) Query: 63 IEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHG 122 I N ++ HF + L + P+ + DK I+++ G + + G G Sbjct: 776 IGMGNMLKDVLEEHFGQRVLFLNGSVPK-KERDK---MIEQFQNGTYDIFILSLKAGGTG 831 Query: 123 LNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQ 182 LNL N ++ + WW+ +E R + G KR V V+ LI T++E + + Sbjct: 832 LNLTA-ANHVIHYDRWWN-----PAVENQATDRAYRIGQKRFVHVHKLITTGTLEEKIDE 885 Query: 183 RLRTKSTIQDLLLNA 197 L K ++ + ++ + Sbjct: 886 MLERKQSLNNAVITS 900 >gi|148548802|ref|YP_001268904.1| non-specific serine/threonine protein kinase [Pseudomonas putida F1] gi|148512860|gb|ABQ79720.1| Non-specific serine/threonine protein kinase [Pseudomonas putida F1] Length = 1105 Score = 36.6 bits (83), Expect = 2.2, Method: Compositional matrix adjust. Identities = 26/107 (24%), Positives = 50/107 (46%), Gaps = 7/107 (6%) Query: 91 GRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 G T D+ +Q++ +G+ + + G GLNL + ++ F WW+ Q +R Sbjct: 980 GDTRDRR-TPVQQFQQGESEVFLISLKAGGVGLNLTA-ADTVIHFDPWWNPASENQATDR 1037 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + G + VFV+ LI + T++E + + K+ + LL+ Sbjct: 1038 A-----YRIGQDKPVFVFKLITRGTVEEKIQLLQQEKAALAASLLDG 1079 >gi|302500427|ref|XP_003012207.1| hypothetical protein ARB_01467 [Arthroderma benhamiae CBS 112371] gi|291175764|gb|EFE31567.1| hypothetical protein ARB_01467 [Arthroderma benhamiae CBS 112371] Length = 881 Score = 36.6 bits (83), Expect = 2.2, Method: Compositional matrix adjust. Identities = 24/79 (30%), Positives = 40/79 (50%), Gaps = 12/79 (15%) Query: 120 GHGLNLQYGGNILVFFSLW---WDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTI 176 G G+NL +++F S W DL+ Q RIG T+ V VY L + TI Sbjct: 717 GQGINLTAADTVILFDSDWNPQQDLQ-AQDRAHRIGQTK--------PVIVYRLATRGTI 767 Query: 177 DELVLQRLRTKSTIQDLLL 195 ++ +L+R +K ++ L++ Sbjct: 768 EQTLLERAGSKRRLEKLVI 786 >gi|104781117|ref|YP_607615.1| SNF2 family DNA helicase [Pseudomonas entomophila L48] gi|95110104|emb|CAK14811.1| putative DNA helicases, SNF2 family [Pseudomonas entomophila L48] Length = 946 Score = 36.6 bits (83), Expect = 2.2, Method: Compositional matrix adjust. Identities = 23/80 (28%), Positives = 38/80 (47%), Gaps = 6/80 (7%) Query: 118 SCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 + G GLNL + ++ WW+ +E R + G +R V +Y L+A+NTI+ Sbjct: 852 AGGSGLNL-TAADYVIHLDPWWN-----PAVEDQASDRAYRIGQQRPVTIYRLVAENTIE 905 Query: 178 ELVLQRLRTKSTIQDLLLNA 197 E ++ K + D LL Sbjct: 906 EQIVALHARKRDLADSLLEG 925 >gi|302656074|ref|XP_003019794.1| hypothetical protein TRV_06171 [Trichophyton verrucosum HKI 0517] gi|291183564|gb|EFE39170.1| hypothetical protein TRV_06171 [Trichophyton verrucosum HKI 0517] Length = 881 Score = 36.6 bits (83), Expect = 2.2, Method: Compositional matrix adjust. Identities = 24/79 (30%), Positives = 40/79 (50%), Gaps = 12/79 (15%) Query: 120 GHGLNLQYGGNILVFFSLW---WDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTI 176 G G+NL +++F S W DL+ Q RIG T+ V VY L + TI Sbjct: 717 GQGINLTAADTVILFDSDWNPQQDLQ-AQDRAHRIGQTK--------PVIVYRLATRGTI 767 Query: 177 DELVLQRLRTKSTIQDLLL 195 ++ +L+R +K ++ L++ Sbjct: 768 EQTLLERAGSKRRLEKLVI 786 >gi|168000545|ref|XP_001752976.1| SNF2 family DNA-dependent ATPase [Physcomitrella patens subsp. patens] gi|162695675|gb|EDQ82017.1| SNF2 family DNA-dependent ATPase [Physcomitrella patens subsp. patens] Length = 653 Score = 36.6 bits (83), Expect = 2.2, Method: Compositional matrix adjust. Identities = 21/83 (25%), Positives = 40/83 (48%), Gaps = 6/83 (7%) Query: 105 NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA 164 + ++ +L A +CG G++L +++ LW + R ++R + G +R Sbjct: 524 TDPEVRVLCASIKACGEGISLVGASRVILLEVLW------NPSVPRQAISRAFRIGQQRK 577 Query: 165 VFVYYLIAQNTIDELVLQRLRTK 187 V VY LIA T +E+ + T+ Sbjct: 578 VVVYRLIAAGTYEEMNMHAAATR 600 >gi|134055454|emb|CAK43969.1| unnamed protein product [Aspergillus niger] Length = 1163 Score = 36.6 bits (83), Expect = 2.2, Method: Compositional matrix adjust. Identities = 43/149 (28%), Positives = 62/149 (41%), Gaps = 42/149 (28%) Query: 81 LARLQKA------FPQ-GRTLD--KDPCTIQEWNEGKIPLLFAH------------PAS- 118 LAR+QK F Q R LD +D C +E+N +I AH P S Sbjct: 510 LARMQKQGSRVLIFSQMSRVLDILEDYCVFREYNYCRIDGTTAHEDRIAAIDEYNKPGSE 569 Query: 119 ----------CGHGLNLQYGGNILVFFSLWWDLEEHQQM--IERIGVTRQRQAGFKRAVF 166 G G+NL +++F S W + Q M RIG T+Q V Sbjct: 570 KFIFLLTTRAGGLGINLTTADIVVLFDSDWNPQADLQAMDRAHRIGQTKQ--------VV 621 Query: 167 VYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 V+ + +N I+E VL+R K + L++ Sbjct: 622 VFRFVTENAIEEKVLERAAQKLRLDQLVI 650 >gi|118480284|ref|YP_897435.1| SNF2 family helicase [Bacillus thuringiensis str. Al Hakam] gi|196045586|ref|ZP_03112816.1| putative helicase [Bacillus cereus 03BB108] gi|118419509|gb|ABK87928.1| SNF2 family helicase [Bacillus thuringiensis str. Al Hakam] gi|196023417|gb|EDX62094.1| putative helicase [Bacillus cereus 03BB108] Length = 918 Score = 36.6 bits (83), Expect = 2.2, Method: Compositional matrix adjust. Identities = 31/135 (22%), Positives = 59/135 (43%), Gaps = 10/135 (7%) Query: 63 IEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHG 122 I N ++ HF + L + P+ + DK I+++ G + + G G Sbjct: 776 IGMGNMLKNVLEEHFGQRVLFLNGSVPK-KERDK---MIEQFQNGTYDIFILSLKAGGTG 831 Query: 123 LNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQ 182 LNL N ++ + WW+ +E R + G KR V V+ LI T++E + + Sbjct: 832 LNLTA-ANHVIHYDRWWN-----PAVENQATDRAYRIGQKRFVHVHKLITTGTLEEKIDE 885 Query: 183 RLRTKSTIQDLLLNA 197 L K ++ + ++ + Sbjct: 886 MLERKQSLNNAVITS 900 >gi|196039505|ref|ZP_03106810.1| putative helicase [Bacillus cereus NVH0597-99] gi|196029665|gb|EDX68267.1| putative helicase [Bacillus cereus NVH0597-99] Length = 918 Score = 36.6 bits (83), Expect = 2.2, Method: Compositional matrix adjust. Identities = 31/135 (22%), Positives = 59/135 (43%), Gaps = 10/135 (7%) Query: 63 IEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHG 122 I N ++ HF + L + P+ + DK I+++ G + + G G Sbjct: 776 IGMGNMLKNVLEEHFGQRVLFLNGSVPK-KERDK---MIEQFQNGTYDIFILSLKAGGTG 831 Query: 123 LNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQ 182 LNL N ++ + WW+ +E R + G KR V V+ LI T++E + + Sbjct: 832 LNLTA-ANHVIHYDRWWN-----PAVENQATDRAYRIGQKRFVHVHKLITTGTLEEKIDE 885 Query: 183 RLRTKSTIQDLLLNA 197 L K ++ + ++ + Sbjct: 886 MLERKQSLNNAVITS 900 >gi|228936530|ref|ZP_04099326.1| Helicase, SNF2/RAD54 [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1] gi|228823118|gb|EEM68954.1| Helicase, SNF2/RAD54 [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1] Length = 855 Score = 36.6 bits (83), Expect = 2.3, Method: Compositional matrix adjust. Identities = 31/135 (22%), Positives = 59/135 (43%), Gaps = 10/135 (7%) Query: 63 IEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHG 122 I N ++ HF + L + P+ + DK I+++ G + + G G Sbjct: 713 IGMGNMLKNVLEEHFGQRVLFLNGSVPK-KERDK---MIEQFQNGTYDIFILSLKAGGTG 768 Query: 123 LNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQ 182 LNL N ++ + WW+ +E R + G KR V V+ LI T++E + + Sbjct: 769 LNLTA-ANHVIHYDRWWN-----PAVENQATDRAYRIGQKRFVHVHKLITTGTLEEKIDE 822 Query: 183 RLRTKSTIQDLLLNA 197 L K ++ + ++ + Sbjct: 823 MLERKQSLNNAVITS 837 >gi|50312307|ref|XP_456186.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140] gi|49645322|emb|CAG98894.1| KLLA0F24838p [Kluyveromyces lactis] Length = 1062 Score = 36.6 bits (83), Expect = 2.3, Method: Compositional matrix adjust. Identities = 22/78 (28%), Positives = 39/78 (50%), Gaps = 6/78 (7%) Query: 118 SCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 + G G+NL ++++ S W + Q M R + G K+ VFVY + +N I+ Sbjct: 520 AGGLGINLVTADTVVLYDSDWNPQADLQAM------DRAHRIGQKKQVFVYRFVTENAIE 573 Query: 178 ELVLQRLRTKSTIQDLLL 195 E V++R K + L++ Sbjct: 574 EKVIERAAQKLRLDQLVI 591 >gi|87200188|ref|YP_497445.1| helicase-like [Novosphingobium aromaticivorans DSM 12444] gi|87135869|gb|ABD26611.1| helicase-like protein [Novosphingobium aromaticivorans DSM 12444] Length = 922 Score = 36.6 bits (83), Expect = 2.3, Method: Composition-based stats. Identities = 32/87 (36%), Positives = 45/87 (51%), Gaps = 8/87 (9%) Query: 106 EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 E K+ ++ A A+C GLNLQ G L+ L W+ +Q I RI +R +R V Sbjct: 763 ERKLRVVCATDAAC-EGLNLQTLGT-LINVDLPWNPSRLEQRIGRI----KRYGQQRREV 816 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQD 192 + L+ TIDE V QRL + +QD Sbjct: 817 DMANLVYSGTIDERVYQRLSER--MQD 841 >gi|282852065|ref|ZP_06261423.1| SNF2 family N-terminal domain protein [Lactobacillus gasseri 224-1] gi|282556825|gb|EFB62429.1| SNF2 family N-terminal domain protein [Lactobacillus gasseri 224-1] Length = 424 Score = 36.6 bits (83), Expect = 2.3, Method: Compositional matrix adjust. Identities = 20/80 (25%), Positives = 38/80 (47%), Gaps = 6/80 (7%) Query: 111 LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYL 170 +L + G GLN+Q +++ W E+Q ++R + G R V VY L Sbjct: 300 VLLVQIDAGGFGLNIQAANRVILCEPQWKPSTENQ------AISRAYRMGQNRNVMVYRL 353 Query: 171 IAQNTIDELVLQRLRTKSTI 190 + + ++DE +++ + K I Sbjct: 354 LTKESVDETMMEIIHEKEDI 373 >gi|115474249|ref|NP_001060723.1| Os07g0692600 [Oryza sativa Japonica Group] gi|113612259|dbj|BAF22637.1| Os07g0692600 [Oryza sativa Japonica Group] Length = 475 Score = 36.6 bits (83), Expect = 2.3, Method: Compositional matrix adjust. Identities = 23/72 (31%), Positives = 36/72 (50%), Gaps = 6/72 (8%) Query: 107 GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVF 166 GK +L A +C G++L G + LV W+ + +Q I R + G +R V+ Sbjct: 353 GKRKVLIASTTACAEGISLT-GASRLVMLDSEWNHSKTRQAI-----ARAFRRGQERTVY 406 Query: 167 VYYLIAQNTIDE 178 VY L+A T +E Sbjct: 407 VYLLVASGTWEE 418 >gi|46125779|ref|XP_387443.1| hypothetical protein FG07267.1 [Gibberella zeae PH-1] Length = 1895 Score = 36.6 bits (83), Expect = 2.3, Method: Compositional matrix adjust. Identities = 27/98 (27%), Positives = 46/98 (46%), Gaps = 15/98 (15%) Query: 90 QGRTLD----KDPCTI-----QEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWD 140 QGRT+ K P + +++N+G + A+ G GLN+ +G N +V F + Sbjct: 1325 QGRTVSRMDGKTPVAVRQQQVKDFNQGSKEVFLISTAAGGVGLNI-HGANRVVIFDI--- 1380 Query: 141 LEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDE 178 H E+ V R + G ++ VFVY + T ++ Sbjct: 1381 --RHNPSHEQQAVGRAYRIGQQKKVFVYRFMVAGTFED 1416 >gi|301056711|ref|YP_003794922.1| SNF2 family helicase [Bacillus anthracis CI] gi|300378880|gb|ADK07784.1| SNF2 family helicase [Bacillus cereus biovar anthracis str. CI] Length = 918 Score = 36.6 bits (83), Expect = 2.3, Method: Compositional matrix adjust. Identities = 31/135 (22%), Positives = 59/135 (43%), Gaps = 10/135 (7%) Query: 63 IEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHG 122 I N ++ HF + L + P+ + DK I+++ G + + G G Sbjct: 776 IGMGNMLKNVLEEHFGQRVLFLNGSVPK-KERDK---MIEQFQNGTYDIFILSLKAGGTG 831 Query: 123 LNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQ 182 LNL N ++ + WW+ +E R + G KR V V+ LI T++E + + Sbjct: 832 LNLTA-ANHVIHYDRWWN-----PAVENQATDRAYRIGQKRFVHVHKLITTGTLEEKIDE 885 Query: 183 RLRTKSTIQDLLLNA 197 L K ++ + ++ + Sbjct: 886 MLERKQSLNNAVITS 900 >gi|228903720|ref|ZP_04067840.1| Helicase, SNF2/RAD54 [Bacillus thuringiensis IBL 4222] gi|228855988|gb|EEN00528.1| Helicase, SNF2/RAD54 [Bacillus thuringiensis IBL 4222] Length = 856 Score = 36.6 bits (83), Expect = 2.3, Method: Compositional matrix adjust. Identities = 24/97 (24%), Positives = 45/97 (46%), Gaps = 6/97 (6%) Query: 101 IQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 I+E+ G + + G GLNL N ++ + WW+ +E R + G Sbjct: 748 IEEFQNGTYDIFILSLKAGGTGLNLTA-ANHVIHYDRWWN-----PAVENQATDRAYRIG 801 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 KR V V+ LI T++E + + L K ++ + ++ + Sbjct: 802 QKRFVHVHKLITTGTLEEKIDEMLERKQSLNNAVITS 838 >gi|1763712|emb|CAB05939.1| ywqA [Bacillus subtilis subsp. subtilis str. 168] Length = 867 Score = 36.6 bits (83), Expect = 2.3, Method: Compositional matrix adjust. Identities = 24/97 (24%), Positives = 46/97 (47%), Gaps = 6/97 (6%) Query: 101 IQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 ++++ + P L + G GLNL N ++ + WW+ +E R + G Sbjct: 754 VEKFQRKEYPTLILSLKAGGTGLNLTA-ANHVIHYDRWWN-----PAVENQATDRAYRIG 807 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 +R V V+ +I TI+E + L +K T+ D ++ + Sbjct: 808 QERFVHVHKMITTGTIEEKIDVMLESKQTLNDQIIQS 844 >gi|23100530|ref|NP_693997.1| helicase [Oceanobacillus iheyensis HTE831] gi|22778763|dbj|BAC15031.1| helicase (swi/snf family) [Oceanobacillus iheyensis HTE831] Length = 1056 Score = 36.6 bits (83), Expect = 2.3, Method: Compositional matrix adjust. Identities = 25/91 (27%), Positives = 42/91 (46%), Gaps = 7/91 (7%) Query: 91 GRTLDKDPCTIQE-WNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIE 149 G+T K+ + E +N G+ + + G GLNL + + F LWW+ +E Sbjct: 936 GQTSSKERVEMSERFNHGENDIFLISLKAGGTGLNLTGADTV-ILFDLWWN-----PAVE 989 Query: 150 RIGVTRQRQAGFKRAVFVYYLIAQNTIDELV 180 R + G K+ V V L+ + TI+E + Sbjct: 990 DQATGRAHRFGQKKVVQVIRLVTEGTIEEKI 1020 >gi|186687055|ref|YP_001870198.1| SNF2-related protein [Nostoc punctiforme PCC 73102] gi|186469358|gb|ACC85157.1| SNF2-related protein [Nostoc punctiforme PCC 73102] Length = 1403 Score = 36.6 bits (83), Expect = 2.3, Method: Compositional matrix adjust. Identities = 23/78 (29%), Positives = 38/78 (48%), Gaps = 6/78 (7%) Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 G GLNL + ++ WW+ +E R + G +R V +Y L+A++TI+E Sbjct: 1313 GTGLNLT-AADYVIHTDPWWN-----PAVEDQASDRAHRIGQQRPVTIYRLVAKDTIEEK 1366 Query: 180 VLQRLRTKSTIQDLLLNA 197 ++Q K + D LL Sbjct: 1367 IVQLHHQKRDLADSLLEG 1384 >gi|149174125|ref|ZP_01852753.1| swi/snf family helicase_2 [Planctomyces maris DSM 8797] gi|148847105|gb|EDL61440.1| swi/snf family helicase_2 [Planctomyces maris DSM 8797] Length = 642 Score = 36.6 bits (83), Expect = 2.4, Method: Compositional matrix adjust. Identities = 25/78 (32%), Positives = 37/78 (47%), Gaps = 9/78 (11%) Query: 111 LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYL 170 LL + GLNLQ+ G + + F WW+ IE + R + G K V V Sbjct: 520 LLLMSYGTGAVGLNLQFAGYVFL-FDRWWN-----PAIEDQAINRAHRIGQKTQVIVTKF 573 Query: 171 IAQNTIDE---LVLQRLR 185 + NTI+E +VL++ R Sbjct: 574 VCNNTIEERIDMVLEQKR 591 >gi|312074579|ref|XP_003140033.1| hypothetical protein LOAG_04448 [Loa loa] gi|307764800|gb|EFO24034.1| hypothetical protein LOAG_04448 [Loa loa] Length = 1841 Score = 36.6 bits (83), Expect = 2.4, Method: Compositional matrix adjust. Identities = 19/79 (24%), Positives = 41/79 (51%), Gaps = 6/79 (7%) Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 G G+NL +++F S W + Q M +R + G K+ V +Y L+ + +++E Sbjct: 890 GLGINLATADTVIIFDSDWNPQNDLQAM------SRAHRIGQKKQVNIYRLVTKASVEEE 943 Query: 180 VLQRLRTKSTIQDLLLNAL 198 +++R + K + L++ + Sbjct: 944 IVERAKRKLVLDHLIIQRM 962 >gi|225850307|ref|YP_002730541.1| helicase, Snf2 family [Persephonella marina EX-H1] gi|225646235|gb|ACO04421.1| helicase, Snf2 family [Persephonella marina EX-H1] Length = 562 Score = 36.6 bits (83), Expect = 2.4, Method: Compositional matrix adjust. Identities = 23/84 (27%), Positives = 43/84 (51%), Gaps = 6/84 (7%) Query: 117 ASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTI 176 S G GL L + +FF L W+ + Q +RI + G K + +Y + +NT+ Sbjct: 461 TSAGEGLTLT-ESSYAIFFDLHWNPAKIWQAEDRI-----HRIGQKNKINIYNFVMRNTV 514 Query: 177 DELVLQRLRTKSTIQDLLLNALKK 200 +E +LQ+L K + +++ ++K Sbjct: 515 EERILQKLEEKRAMIQNVIDGIEK 538 >gi|170577655|ref|XP_001894090.1| Type III restriction enzyme, res subunit family protein [Brugia malayi] gi|158599485|gb|EDP37070.1| Type III restriction enzyme, res subunit family protein [Brugia malayi] Length = 805 Score = 36.6 bits (83), Expect = 2.4, Method: Compositional matrix adjust. Identities = 25/75 (33%), Positives = 39/75 (52%), Gaps = 6/75 (8%) Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 G GLNL G N ++ F W+ Q + RI RQ G ++ ++ LI T+DE Sbjct: 558 GLGLNL-VGANRMILFDSDWNPAVDMQAMARIW----RQ-GQEKPCHIFRLITAGTVDEK 611 Query: 180 VLQRLRTKSTIQDLL 194 +LQR KS++ ++ Sbjct: 612 ILQRQIKKSSLNTIV 626 >gi|302813632|ref|XP_002988501.1| hypothetical protein SELMODRAFT_427193 [Selaginella moellendorffii] gi|300143608|gb|EFJ10297.1| hypothetical protein SELMODRAFT_427193 [Selaginella moellendorffii] Length = 950 Score = 36.6 bits (83), Expect = 2.4, Method: Composition-based stats. Identities = 26/84 (30%), Positives = 41/84 (48%), Gaps = 9/84 (10%) Query: 118 SCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 + G GLNL N+ + WW+ +Q ++R+ + G R V V+ LIA ++I+ Sbjct: 857 AAGVGLNLVTASNVFMM-DPWWNPAVEEQAMDRV-----HRLGQTRDVHVFRLIATDSIE 910 Query: 178 ELVLQRLRTKSTIQDLLLNALKKE 201 E +LQ K + AL KE Sbjct: 911 ERLLQVQEKKRAYAQI---ALGKE 931 >gi|257052779|ref|YP_003130612.1| helicase domain protein [Halorhabdus utahensis DSM 12940] gi|256691542|gb|ACV11879.1| helicase domain protein [Halorhabdus utahensis DSM 12940] Length = 952 Score = 36.6 bits (83), Expect = 2.4, Method: Composition-based stats. Identities = 20/70 (28%), Positives = 36/70 (51%), Gaps = 10/70 (14%) Query: 122 GLNLQYGGNILVFFSLWWD---LEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDE 178 G+NLQY N ++ + L W+ LE+ ++R G R + VF+ ++ + +D Sbjct: 565 GMNLQYAANQVIHYELPWNPNRLEQRNGRVDRYGQKRDK-------VFIRTMVVDDPMDR 617 Query: 179 LVLQRLRTKS 188 VL +L K+ Sbjct: 618 TVLTKLIKKA 627 >gi|170584903|ref|XP_001897230.1| Type III restriction enzyme, res subunit family protein [Brugia malayi] gi|158595354|gb|EDP33914.1| Type III restriction enzyme, res subunit family protein [Brugia malayi] Length = 1595 Score = 36.6 bits (83), Expect = 2.4, Method: Compositional matrix adjust. Identities = 19/79 (24%), Positives = 41/79 (51%), Gaps = 6/79 (7%) Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 G G+NL +++F S W + Q M +R + G K+ V +Y L+ + +++E Sbjct: 812 GLGINLATADTVIIFDSDWNPQNDLQAM------SRAHRIGQKKQVNIYRLVTKASVEEE 865 Query: 180 VLQRLRTKSTIQDLLLNAL 198 +++R + K + L++ + Sbjct: 866 IVERAKRKLVLDHLIIQRM 884 >gi|159028978|emb|CAO87439.1| unnamed protein product [Microcystis aeruginosa PCC 7806] Length = 1390 Score = 36.2 bits (82), Expect = 2.4, Method: Compositional matrix adjust. Identities = 23/80 (28%), Positives = 38/80 (47%), Gaps = 6/80 (7%) Query: 118 SCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 + G GLNL + ++ WW+ +E R + G KR V +Y L+A++TI+ Sbjct: 1298 AGGTGLNLT-AADYVIHLDPWWN-----PAVEDQASDRAHRIGQKRPVTIYRLVAKDTIE 1351 Query: 178 ELVLQRLRTKSTIQDLLLNA 197 E ++ K + D LL Sbjct: 1352 EKIVDLHHHKRDLADSLLEG 1371 >gi|211906288|gb|ACJ11662.1| putative phage-associated helicase [Candidatus Hamiltonella defensa] Length = 72 Score = 36.2 bits (82), Expect = 2.5, Method: Compositional matrix adjust. Identities = 19/48 (39%), Positives = 29/48 (60%) Query: 154 TRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 R + G R VF+++L+ ++ID VL+ L K Q LL+ALKK+ Sbjct: 6 ARLHRQGQTRPVFIHHLVMNDSIDITVLEALENKHINQKALLDALKKD 53 >gi|255565329|ref|XP_002523656.1| chromodomain helicase DNA binding protein, putative [Ricinus communis] gi|223537108|gb|EEF38742.1| chromodomain helicase DNA binding protein, putative [Ricinus communis] Length = 2257 Score = 36.2 bits (82), Expect = 2.5, Method: Composition-based stats. Identities = 24/98 (24%), Positives = 46/98 (46%), Gaps = 7/98 (7%) Query: 100 TIQEWNEGKIPLLFA-HPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQ 158 +I +N+ K +F SCG G+NL ++++ S D H + + R + Sbjct: 1046 SISRFNQDKSRFVFLLSTRSCGLGINLATADTVVIYDS---DFNPHADIQ---AMNRAHR 1099 Query: 159 AGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 G + VY L+ + +++E +LQ + K + L +N Sbjct: 1100 IGQSNRLLVYRLVVRASVEERILQLAKKKLMLDQLFVN 1137 >gi|134083941|emb|CAK43037.1| unnamed protein product [Aspergillus niger] Length = 1418 Score = 36.2 bits (82), Expect = 2.5, Method: Compositional matrix adjust. Identities = 24/82 (29%), Positives = 42/82 (51%), Gaps = 6/82 (7%) Query: 118 SCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 + G GLNLQ +++F S W HQ + + R + G K V + LI+ N+++ Sbjct: 941 AGGLGLNLQSADTVIIFDSDW---NPHQDLQAQ---DRAHRIGQKNEVRILRLISSNSVE 994 Query: 178 ELVLQRLRTKSTIQDLLLNALK 199 E +L+R + K + ++ A K Sbjct: 995 EKILERAQFKLDMDGKVIQAGK 1016 >gi|109898913|ref|YP_662168.1| SNF2-related [Pseudoalteromonas atlantica T6c] gi|109701194|gb|ABG41114.1| SNF2-related protein [Pseudoalteromonas atlantica T6c] Length = 1437 Score = 36.2 bits (82), Expect = 2.5, Method: Compositional matrix adjust. Identities = 23/97 (23%), Positives = 43/97 (44%), Gaps = 6/97 (6%) Query: 99 CTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQ 158 ++ + G+ + + G GLNL + ++ WW+ +E R + Sbjct: 1325 ASVNAFQRGEGDIFLISLKAGGSGLNLT-AADYVIHMDPWWN-----PAVEEQASDRAHR 1378 Query: 159 AGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 G R V +Y L+ +NTI+E ++ + K + D LL Sbjct: 1379 IGQLRPVTIYRLVTRNTIEEKIVSLHQHKRDLADTLL 1415 >gi|257095431|ref|YP_003169072.1| Non-specific serine/threonine protein kinase [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] gi|257047955|gb|ACV37143.1| Non-specific serine/threonine protein kinase [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] Length = 842 Score = 36.2 bits (82), Expect = 2.5, Method: Composition-based stats. Identities = 29/103 (28%), Positives = 46/103 (44%), Gaps = 5/103 (4%) Query: 88 FPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQM 147 F G DK + +N +F + G GLNLQ+ ++V L W+ +Q Sbjct: 576 FHGGVPGDKRGALVDRFNNDPACRVFLSTDAGGVGLNLQHAAAVVVNMDLPWNPAVLEQR 635 Query: 148 IERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 I R+ + G R V V +A+ TI+E +L L K ++ Sbjct: 636 IGRV-----HRLGQTRGVQVINFVARGTIEEGMLSVLAFKQSL 673 >gi|317036939|ref|XP_001398370.2| chromatin structure-remodeling complex subunit snf2 [Aspergillus niger CBS 513.88] Length = 1422 Score = 36.2 bits (82), Expect = 2.5, Method: Compositional matrix adjust. Identities = 24/82 (29%), Positives = 42/82 (51%), Gaps = 6/82 (7%) Query: 118 SCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 + G GLNLQ +++F S W HQ + + R + G K V + LI+ N+++ Sbjct: 945 AGGLGLNLQSADTVIIFDSDW---NPHQDLQAQ---DRAHRIGQKNEVRILRLISSNSVE 998 Query: 178 ELVLQRLRTKSTIQDLLLNALK 199 E +L+R + K + ++ A K Sbjct: 999 EKILERAQFKLDMDGKVIQAGK 1020 >gi|311110806|ref|ZP_07712203.1| superfamily II DNA/RNA helicase, SNF2 family [Lactobacillus gasseri MV-22] gi|311065960|gb|EFQ46300.1| superfamily II DNA/RNA helicase, SNF2 family [Lactobacillus gasseri MV-22] Length = 761 Score = 36.2 bits (82), Expect = 2.5, Method: Compositional matrix adjust. Identities = 20/80 (25%), Positives = 38/80 (47%), Gaps = 6/80 (7%) Query: 111 LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYL 170 +L + G GLN+Q +++ W E+Q ++R + G R V VY L Sbjct: 637 VLLVQIDAGGFGLNIQAANRVILCEPQWKPSTENQ------AISRAYRMGQNRNVMVYRL 690 Query: 171 IAQNTIDELVLQRLRTKSTI 190 + + ++DE +++ + K I Sbjct: 691 LTKESVDETMMEIIHEKEDI 710 >gi|242015095|ref|XP_002428209.1| Chromo domain protein, putative [Pediculus humanus corporis] gi|212512770|gb|EEB15471.1| Chromo domain protein, putative [Pediculus humanus corporis] Length = 1795 Score = 36.2 bits (82), Expect = 2.6, Method: Compositional matrix adjust. Identities = 19/79 (24%), Positives = 39/79 (49%), Gaps = 6/79 (7%) Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 G G+NL +++F S W + Q R + G K V +Y L+ +N+++E Sbjct: 821 GLGINLATADTVIIFDSDWNPQNDLQAQ------ARAHRIGQKNQVNIYRLVTKNSVEEE 874 Query: 180 VLQRLRTKSTIQDLLLNAL 198 +++R + K + L++ + Sbjct: 875 IIERAKKKMVLDHLVIQRM 893 >gi|12859719|dbj|BAB31751.1| unnamed protein product [Mus musculus] Length = 350 Score = 36.2 bits (82), Expect = 2.6, Method: Compositional matrix adjust. Identities = 19/48 (39%), Positives = 29/48 (60%), Gaps = 8/48 (16%) Query: 150 RIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 R+G T+Q V VY LI + TI+E +LQR + KS IQ ++++ Sbjct: 6 RLGQTKQ--------VTVYRLICKGTIEERILQRAKEKSEIQRMVISG 45 >gi|156550287|ref|XP_001603076.1| PREDICTED: similar to CG2684-PA [Nasonia vitripennis] Length = 1032 Score = 36.2 bits (82), Expect = 2.6, Method: Compositional matrix adjust. Identities = 44/153 (28%), Positives = 69/153 (45%), Gaps = 24/153 (15%) Query: 42 YDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNS----------DLARLQKAFPQG 91 +D+E+ +V +K +E I+EK + IIV + S D+ + A G Sbjct: 855 FDDERRSSKVR-AIVKTIEEILEKGDK--IIVVSQWTSFLGIVAKNLDDIEDAKYAMFTG 911 Query: 92 RTLDKDPCTI----QEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQM 147 K+ I + NE LL + A G GLNL G N L+ + W+ + Q Sbjct: 912 NVAVKNRQAIVDKFNDPNEDTNILLLSLTAG-GVGLNL-VGANHLLLIDIHWNPQLESQA 969 Query: 148 IERIGVTRQRQAGFKRAVFVYYLIAQNTIDELV 180 +RI + G K+ V+VY I ++TI+E V Sbjct: 970 QDRI-----YRFGQKKNVYVYKFICKDTIEERV 997 >gi|324500109|gb|ADY40062.1| Chromodomain-helicase-DNA-binding protein 1 [Ascaris suum] Length = 1095 Score = 36.2 bits (82), Expect = 2.6, Method: Compositional matrix adjust. Identities = 19/79 (24%), Positives = 41/79 (51%), Gaps = 6/79 (7%) Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 G G+NL +++F S W + Q M +R + G K+ V +Y L+ + +++E Sbjct: 888 GLGINLATADTVIIFDSDWNPQNDLQAM------SRAHRIGQKKQVNIYRLVTKASVEEE 941 Query: 180 VLQRLRTKSTIQDLLLNAL 198 +++R + K + L++ + Sbjct: 942 IVERAKRKLVLDHLVIQRM 960 >gi|91201478|emb|CAJ74538.1| similar to ATP-dependent RNA helicase (RNA polymerase associated protein) [Candidatus Kuenenia stuttgartiensis] Length = 886 Score = 36.2 bits (82), Expect = 2.6, Method: Compositional matrix adjust. Identities = 24/86 (27%), Positives = 39/86 (45%), Gaps = 6/86 (6%) Query: 105 NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA 164 N IP + + G GLNL ++ + F WW+ +E R + G K+ Sbjct: 778 NREYIPYMVLSLKAGGVGLNLTEANHV-IHFDRWWN-----PAVENQATDRAFRIGQKKN 831 Query: 165 VFVYYLIAQNTIDELVLQRLRTKSTI 190 V V+ I + TI+E + LR K+ + Sbjct: 832 VIVHKFITKGTIEEKINDMLREKTKL 857 >gi|297531489|ref|YP_003672764.1| SNF2-related protein [Geobacillus sp. C56-T3] gi|297254741|gb|ADI28187.1| SNF2-related protein [Geobacillus sp. C56-T3] Length = 924 Score = 36.2 bits (82), Expect = 2.6, Method: Compositional matrix adjust. Identities = 25/94 (26%), Positives = 42/94 (44%), Gaps = 6/94 (6%) Query: 101 IQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 + E+ K P+ + G GLNL N ++ F WW+ +E R + G Sbjct: 808 VDEFQAKKAPIFLLSLKAGGTGLNLTA-ANHVIHFDRWWN-----PAVENQATDRAYRIG 861 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 + V V+ LI TI+E + + L K + D++ Sbjct: 862 QTKFVHVHKLITIGTIEEKIDEMLEQKQALADII 895 >gi|256419642|ref|YP_003120295.1| SNF2-related protein [Chitinophaga pinensis DSM 2588] gi|256034550|gb|ACU58094.1| SNF2-related protein [Chitinophaga pinensis DSM 2588] Length = 1250 Score = 36.2 bits (82), Expect = 2.6, Method: Compositional matrix adjust. Identities = 22/76 (28%), Positives = 41/76 (53%), Gaps = 7/76 (9%) Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 G GLNL + + WW+ QQ I+R + G + +F Y +I ++T++E Sbjct: 1161 GVGLNLT-AADYVYIVDPWWNPAVEQQAIDRT-----HRIGQTKNIFAYRMICKDTVEEK 1214 Query: 180 VLQ-RLRTKSTIQDLL 194 +LQ + R KS +++++ Sbjct: 1215 ILQLQERKKSLVKEII 1230 >gi|7023894|dbj|BAA92122.1| unnamed protein product [Homo sapiens] Length = 350 Score = 36.2 bits (82), Expect = 2.6, Method: Compositional matrix adjust. Identities = 19/48 (39%), Positives = 29/48 (60%), Gaps = 8/48 (16%) Query: 150 RIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 R+G T+Q V VY LI + TI+E +LQR + KS IQ ++++ Sbjct: 6 RLGQTKQ--------VTVYRLICKGTIEERILQRAKEKSEIQRMVISG 45 >gi|307136401|gb|ADN34210.1| chromatin remodeling complex subunit [Cucumis melo subsp. melo] Length = 2374 Score = 36.2 bits (82), Expect = 2.7, Method: Composition-based stats. Identities = 24/97 (24%), Positives = 45/97 (46%), Gaps = 7/97 (7%) Query: 101 IQEWNEGKIPLLFA-HPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQA 159 I +N+ K +F SCG G+NL ++++ S D H + + R + Sbjct: 1180 ITRFNQDKSRFVFLLSTRSCGLGINLATADTVIIYDS---DFNPHADIQ---AMNRAHRI 1233 Query: 160 GFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 G + VY L+ + +++E +LQ + K + L +N Sbjct: 1234 GQSNRLLVYRLVVRASVEERILQLAKKKLMLDQLFVN 1270 >gi|167535979|ref|XP_001749662.1| hypothetical protein [Monosiga brevicollis MX1] gi|163771810|gb|EDQ85471.1| predicted protein [Monosiga brevicollis MX1] Length = 1288 Score = 36.2 bits (82), Expect = 2.7, Method: Compositional matrix adjust. Identities = 26/85 (30%), Positives = 43/85 (50%), Gaps = 12/85 (14%) Query: 118 SCGHGLNLQYGGNILVFFSLW---WDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQN 174 + G GLNLQ +++F S W DL + Q RIG T++ V V+ L+ Sbjct: 872 AGGLGLNLQTADTVVIFDSDWNPHQDL-QAQDRAHRIGQTKE--------VRVFRLVTVQ 922 Query: 175 TIDELVLQRLRTKSTIQDLLLNALK 199 +++E +L+R R K + ++ A K Sbjct: 923 SVEERMLERAREKLDVDQQVIQAGK 947 >gi|322825988|gb|EFZ30789.1| DNA repair and recombination protein RAD54, putative [Trypanosoma cruzi] Length = 1044 Score = 36.2 bits (82), Expect = 2.7, Method: Composition-based stats. Identities = 23/68 (33%), Positives = 36/68 (52%), Gaps = 6/68 (8%) Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 G GLNL G N L+ F W+ Q + R+ + G K+ VF+Y L++ +I+E Sbjct: 779 GVGLNL-IGANRLILFDPDWNPANDAQAMGRVW-----RDGQKKRVFIYRLLSAGSIEEK 832 Query: 180 VLQRLRTK 187 + QR +K Sbjct: 833 IYQRQVSK 840 >gi|145335142|ref|NP_172040.2| chr31 (chromatin remodeling 31); ATP binding / DNA binding / helicase/ nucleic acid binding [Arabidopsis thaliana] gi|332189724|gb|AEE27845.1| chromatin remodeling 31 [Arabidopsis thaliana] Length = 1410 Score = 36.2 bits (82), Expect = 2.7, Method: Composition-based stats. Identities = 20/77 (25%), Positives = 38/77 (49%), Gaps = 8/77 (10%) Query: 101 IQEWNE--GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQ 158 I E+N+ K + A +C G++L +++ +W +ER ++R + Sbjct: 1263 INEFNDPKSKAKVFLASTKACSEGISLVGASRVILLDVVW------NPAVERQAISRAYR 1316 Query: 159 AGFKRAVFVYYLIAQNT 175 G KR V+ Y+L+A+ T Sbjct: 1317 IGQKRIVYTYHLVAKGT 1333 >gi|110740804|dbj|BAE98499.1| hypothetical protein [Arabidopsis thaliana] Length = 1410 Score = 36.2 bits (82), Expect = 2.7, Method: Composition-based stats. Identities = 20/77 (25%), Positives = 38/77 (49%), Gaps = 8/77 (10%) Query: 101 IQEWNE--GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQ 158 I E+N+ K + A +C G++L +++ +W +ER ++R + Sbjct: 1263 INEFNDPKSKAKVFLASTKACSEGISLVGASRVILLDVVW------NPAVERQAISRAYR 1316 Query: 159 AGFKRAVFVYYLIAQNT 175 G KR V+ Y+L+A+ T Sbjct: 1317 IGQKRIVYTYHLVAKGT 1333 >gi|71651467|ref|XP_814411.1| DNA repair and recombination protein RAD54 [Trypanosoma cruzi strain CL Brener] gi|70879380|gb|EAN92560.1| DNA repair and recombination protein RAD54, putative [Trypanosoma cruzi] Length = 1047 Score = 36.2 bits (82), Expect = 2.7, Method: Composition-based stats. Identities = 23/68 (33%), Positives = 36/68 (52%), Gaps = 6/68 (8%) Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 G GLNL G N L+ F W+ Q + R+ + G K+ VF+Y L++ +I+E Sbjct: 779 GVGLNL-IGANRLILFDPDWNPANDAQAMGRVW-----RDGQKKRVFIYRLLSAGSIEEK 832 Query: 180 VLQRLRTK 187 + QR +K Sbjct: 833 IYQRQVSK 840 >gi|71662508|ref|XP_818260.1| DNA repair and recombination protein RAD54 [Trypanosoma cruzi strain CL Brener] gi|70883500|gb|EAN96409.1| DNA repair and recombination protein RAD54, putative [Trypanosoma cruzi] Length = 1045 Score = 36.2 bits (82), Expect = 2.7, Method: Composition-based stats. Identities = 23/68 (33%), Positives = 36/68 (52%), Gaps = 6/68 (8%) Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 G GLNL G N L+ F W+ Q + R+ + G K+ VF+Y L++ +I+E Sbjct: 779 GVGLNL-IGANRLILFDPDWNPANDAQAMGRVW-----RDGQKKRVFIYRLLSAGSIEEK 832 Query: 180 VLQRLRTK 187 + QR +K Sbjct: 833 IYQRQVSK 840 >gi|70998556|ref|XP_754000.1| RSC complex subunit (Sth1) [Aspergillus fumigatus Af293] gi|66851636|gb|EAL91962.1| RSC complex subunit (Sth1), putative [Aspergillus fumigatus Af293] Length = 1406 Score = 36.2 bits (82), Expect = 2.7, Method: Compositional matrix adjust. Identities = 24/82 (29%), Positives = 42/82 (51%), Gaps = 6/82 (7%) Query: 118 SCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 + G GLNLQ +++F S W HQ + + R + G K V + LI+ N+++ Sbjct: 926 AGGLGLNLQTADTVIIFDSDW---NPHQDLQAQ---DRAHRIGQKNEVRILRLISSNSVE 979 Query: 178 ELVLQRLRTKSTIQDLLLNALK 199 E +L+R + K + ++ A K Sbjct: 980 EKILERAQFKLDMDGKVIQAGK 1001 >gi|327300239|ref|XP_003234812.1| hypothetical protein TERG_03864 [Trichophyton rubrum CBS 118892] gi|326462164|gb|EGD87617.1| hypothetical protein TERG_03864 [Trichophyton rubrum CBS 118892] Length = 777 Score = 36.2 bits (82), Expect = 2.7, Method: Compositional matrix adjust. Identities = 24/79 (30%), Positives = 40/79 (50%), Gaps = 12/79 (15%) Query: 120 GHGLNLQYGGNILVFFSLW---WDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTI 176 G G+NL +++F S W DL+ Q RIG T+ V VY L + TI Sbjct: 613 GQGINLTAADTVILFDSDWNPQQDLQ-AQDRAHRIGQTK--------PVIVYRLATRGTI 663 Query: 177 DELVLQRLRTKSTIQDLLL 195 ++ +L+R +K ++ L++ Sbjct: 664 EQTLLERAGSKRRLEKLVI 682 >gi|298241002|ref|ZP_06964809.1| helicase domain protein [Ktedonobacter racemifer DSM 44963] gi|297554056|gb|EFH87920.1| helicase domain protein [Ktedonobacter racemifer DSM 44963] Length = 949 Score = 36.2 bits (82), Expect = 2.7, Method: Composition-based stats. Identities = 29/89 (32%), Positives = 41/89 (46%), Gaps = 9/89 (10%) Query: 106 EGKIPLLFAHP------ASC-GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQ 158 E +I L AHP C G+NLQ N ++ + L W+ H+Q R V R Q Sbjct: 527 ENRIAELGAHPQRVLVCTDCLSEGINLQEHFNAVIHYDLSWNPTRHEQREGR--VDRFGQ 584 Query: 159 AGFKRAVFVYYLIAQNTIDELVLQRLRTK 187 V YY + ++ID++VL L K Sbjct: 585 PAKDVRVVTYYDGSSDSIDQIVLDVLLRK 613 >gi|8778726|gb|AAF79734.1|AC005106_15 T25N20.14 [Arabidopsis thaliana] Length = 1465 Score = 36.2 bits (82), Expect = 2.7, Method: Composition-based stats. Identities = 20/77 (25%), Positives = 38/77 (49%), Gaps = 8/77 (10%) Query: 101 IQEWNE--GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQ 158 I E+N+ K + A +C G++L +++ +W +ER ++R + Sbjct: 1318 INEFNDPKSKAKVFLASTKACSEGISLVGASRVILLDVVW------NPAVERQAISRAYR 1371 Query: 159 AGFKRAVFVYYLIAQNT 175 G KR V+ Y+L+A+ T Sbjct: 1372 IGQKRIVYTYHLVAKGT 1388 >gi|238853530|ref|ZP_04643903.1| superfamily II DNA/RNA helicase, SNF2 family [Lactobacillus gasseri 202-4] gi|238833851|gb|EEQ26115.1| superfamily II DNA/RNA helicase, SNF2 family [Lactobacillus gasseri 202-4] Length = 504 Score = 36.2 bits (82), Expect = 2.8, Method: Compositional matrix adjust. Identities = 20/80 (25%), Positives = 38/80 (47%), Gaps = 6/80 (7%) Query: 111 LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYL 170 +L + G GLN+Q +++ W E+Q ++R + G R V VY L Sbjct: 380 VLLVQIDAGGFGLNIQAANRVILCEPQWKPSTENQ------AISRAYRMGQNRNVMVYRL 433 Query: 171 IAQNTIDELVLQRLRTKSTI 190 + + ++DE +++ + K I Sbjct: 434 LTKESVDETMMEIIHEKEDI 453 >gi|296128669|ref|YP_003635919.1| helicase domain protein [Cellulomonas flavigena DSM 20109] gi|296020484|gb|ADG73720.1| helicase domain protein [Cellulomonas flavigena DSM 20109] Length = 737 Score = 36.2 bits (82), Expect = 2.8, Method: Composition-based stats. Identities = 25/71 (35%), Positives = 35/71 (49%), Gaps = 6/71 (8%) Query: 118 SCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 + G GLNLQ N LV L W E Q I+RI + G + V + +IA TID Sbjct: 612 AAGVGLNLQVASN-LVLAELSWTDAEQTQAIDRI-----HRIGQEEPVTAWRVIAAQTID 665 Query: 178 ELVLQRLRTKS 188 + + + +KS Sbjct: 666 ARIAELIDSKS 676 >gi|255580599|ref|XP_002531123.1| chromodomain helicase DNA binding protein, putative [Ricinus communis] gi|223529287|gb|EEF31257.1| chromodomain helicase DNA binding protein, putative [Ricinus communis] Length = 1718 Score = 36.2 bits (82), Expect = 2.8, Method: Compositional matrix adjust. Identities = 20/82 (24%), Positives = 39/82 (47%), Gaps = 6/82 (7%) Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 G G+NL +++F S W + Q M +R + G + V +Y + +++E Sbjct: 982 GLGINLATADTVIIFDSDWNPQNDLQAM------SRAHRIGQQEVVNIYRFVTSKSVEED 1035 Query: 180 VLQRLRTKSTIQDLLLNALKKE 201 +L+R + K + L++ L E Sbjct: 1036 ILERAKKKMVLDHLVIQKLNAE 1057 >gi|116629551|ref|YP_814723.1| SNF2 family DNA/RNA helicase [Lactobacillus gasseri ATCC 33323] gi|116095133|gb|ABJ60285.1| Superfamily II DNA/RNA helicase, SNF2 family [Lactobacillus gasseri ATCC 33323] Length = 917 Score = 36.2 bits (82), Expect = 2.8, Method: Compositional matrix adjust. Identities = 20/80 (25%), Positives = 38/80 (47%), Gaps = 6/80 (7%) Query: 111 LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYL 170 +L + G GLN+Q +++ W E+Q ++R + G R V VY L Sbjct: 793 VLLVQIDAGGFGLNIQAANRVILCEPQWKPSTENQ------AISRAYRMGQNRNVMVYRL 846 Query: 171 IAQNTIDELVLQRLRTKSTI 190 + + ++DE +++ + K I Sbjct: 847 LTKESVDETMMEIIHEKEDI 866 >gi|195342588|ref|XP_002037882.1| GM18506 [Drosophila sechellia] gi|194132732|gb|EDW54300.1| GM18506 [Drosophila sechellia] Length = 592 Score = 36.2 bits (82), Expect = 2.8, Method: Compositional matrix adjust. Identities = 27/94 (28%), Positives = 43/94 (45%), Gaps = 14/94 (14%) Query: 100 TIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWD---LEEHQQMIERIGVTRQ 156 T Q+ + K+ LL +C G+ L I+VF L W+ L + + RIG T+ Sbjct: 417 TFQKKSSCKVALLSLK--ACNSGITLT-AAEIIVFAELDWNPSTLAQAESRAHRIGQTK- 472 Query: 157 RQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 V YL+A NT D+++ L+ K + Sbjct: 473 -------PVICRYLMAHNTADDIIWNMLKNKQEV 499 >gi|242793561|ref|XP_002482189.1| SNF2 family helicase, putative [Talaromyces stipitatus ATCC 10500] gi|218718777|gb|EED18197.1| SNF2 family helicase, putative [Talaromyces stipitatus ATCC 10500] Length = 938 Score = 36.2 bits (82), Expect = 2.9, Method: Compositional matrix adjust. Identities = 23/77 (29%), Positives = 36/77 (46%), Gaps = 6/77 (7%) Query: 105 NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA 164 N+ K +L A C GLNL N +V WW Q I+R+ + G KR Sbjct: 821 NDPKCTVLLASLNVCSVGLNL-VAANQVVLCDSWWAPAIEDQAIDRV-----YRLGQKRE 874 Query: 165 VFVYYLIAQNTIDELVL 181 V+ L+ + ++++ VL Sbjct: 875 TTVWRLVMEGSVEDRVL 891 >gi|325277313|ref|ZP_08142939.1| non-specific serine/threonine protein kinase [Pseudomonas sp. TJI-51] gi|324097548|gb|EGB95768.1| non-specific serine/threonine protein kinase [Pseudomonas sp. TJI-51] Length = 1105 Score = 36.2 bits (82), Expect = 2.9, Method: Composition-based stats. Identities = 23/97 (23%), Positives = 45/97 (46%), Gaps = 6/97 (6%) Query: 101 IQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 +Q++ +G + + G GLNL + ++ F WW+ Q + R + G Sbjct: 989 VQQFQQGDSEVFLISLKAGGVGLNLTA-ADTVIHFDPWWNPASENQATD-----RAYRIG 1042 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + VFV+ LI + T++E + + K+ + LL+ Sbjct: 1043 QDKPVFVFKLITRGTVEEKIQALQQEKAALAASLLDG 1079 >gi|229032866|ref|ZP_04188821.1| Helicase, SNF2/RAD54 [Bacillus cereus AH1271] gi|228728411|gb|EEL79432.1| Helicase, SNF2/RAD54 [Bacillus cereus AH1271] Length = 855 Score = 36.2 bits (82), Expect = 2.9, Method: Compositional matrix adjust. Identities = 31/135 (22%), Positives = 58/135 (42%), Gaps = 10/135 (7%) Query: 63 IEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHG 122 I N ++ HF + L + P+ + DK I+++ G + + G G Sbjct: 713 IGMGNMLKNVLEEHFGQRVLFLNGSVPK-KERDK---MIEQFQNGTYDIFILSLKAGGTG 768 Query: 123 LNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQ 182 LNL N ++ + WW+ +E R + G KR V V+ LI T++E + + Sbjct: 769 LNLTA-ANHVIHYDRWWN-----PAVENQATDRAYRIGQKRFVHVHKLITTGTLEEKIDE 822 Query: 183 RLRTKSTIQDLLLNA 197 L K ++ + ++ Sbjct: 823 MLERKQSLNNAVITT 837 >gi|229175913|ref|ZP_04303410.1| Helicase, SNF2/RAD54 [Bacillus cereus MM3] gi|228607507|gb|EEK64832.1| Helicase, SNF2/RAD54 [Bacillus cereus MM3] Length = 855 Score = 36.2 bits (82), Expect = 2.9, Method: Compositional matrix adjust. Identities = 31/135 (22%), Positives = 58/135 (42%), Gaps = 10/135 (7%) Query: 63 IEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHG 122 I N ++ HF + L + P+ + DK I+++ G + + G G Sbjct: 713 IGMGNMLKNVLEEHFGQRVLFLNGSVPK-KERDK---MIEQFQNGTYDIFILSLKAGGTG 768 Query: 123 LNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQ 182 LNL N ++ + WW+ +E R + G KR V V+ LI T++E + + Sbjct: 769 LNLTA-ANHVIHYDRWWN-----PAVENQATDRAYRIGQKRFVHVHKLITTGTLEEKIDE 822 Query: 183 RLRTKSTIQDLLLNA 197 L K ++ + ++ Sbjct: 823 MLERKQSLNNAVITT 837 >gi|115438260|ref|XP_001218021.1| SNF2-family ATP dependent chromatin remodeling factor snf21 [Aspergillus terreus NIH2624] gi|114188836|gb|EAU30536.1| SNF2-family ATP dependent chromatin remodeling factor snf21 [Aspergillus terreus NIH2624] Length = 1418 Score = 36.2 bits (82), Expect = 2.9, Method: Compositional matrix adjust. Identities = 25/82 (30%), Positives = 41/82 (50%), Gaps = 6/82 (7%) Query: 118 SCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 + G GLNLQ +++F S W HQ + + R + G K V + LI N+I+ Sbjct: 939 AGGLGLNLQSADTVIIFDSDW---NPHQDLQAQ---DRAHRIGQKNEVRILRLITSNSIE 992 Query: 178 ELVLQRLRTKSTIQDLLLNALK 199 E +L+R + K + ++ A K Sbjct: 993 EKILERAQFKLDMDGKVIQAGK 1014 >gi|324500144|gb|ADY40077.1| Chromodomain-helicase-DNA-binding protein 1 [Ascaris suum] Length = 1875 Score = 36.2 bits (82), Expect = 2.9, Method: Compositional matrix adjust. Identities = 19/79 (24%), Positives = 41/79 (51%), Gaps = 6/79 (7%) Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 G G+NL +++F S W + Q M +R + G K+ V +Y L+ + +++E Sbjct: 888 GLGINLATADTVIIFDSDWNPQNDLQAM------SRAHRIGQKKQVNIYRLVTKASVEEE 941 Query: 180 VLQRLRTKSTIQDLLLNAL 198 +++R + K + L++ + Sbjct: 942 IVERAKRKLVLDHLVIQRM 960 >gi|281207984|gb|EFA82162.1| SNF2-related domain-containing protein [Polysphondylium pallidum PN500] Length = 498 Score = 36.2 bits (82), Expect = 2.9, Method: Compositional matrix adjust. Identities = 26/95 (27%), Positives = 41/95 (43%), Gaps = 16/95 (16%) Query: 108 KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQA-----GFK 162 KI + + G GL L ++ +F L+W GV Q +A G Sbjct: 172 KIKVAILSITAAGTGLTL-TAASVAIFAELYW----------TPGVLMQAEARVHRFGQN 220 Query: 163 RAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 R+V + YL+ NTIDE + L +K + +L+ Sbjct: 221 RSVLIQYLVGINTIDESIWSMLESKKDVLGRILDG 255 >gi|328773098|gb|EGF83135.1| hypothetical protein BATDEDRAFT_7470 [Batrachochytrium dendrobatidis JAM81] Length = 104 Score = 36.2 bits (82), Expect = 2.9, Method: Compositional matrix adjust. Identities = 24/82 (29%), Positives = 40/82 (48%), Gaps = 6/82 (7%) Query: 109 IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVY 168 I ++ G GLNL +++ LWW+ Q I+R+ + G + V V Sbjct: 4 ISVMLVSLKCGGVGLNLSIACRVIIC-DLWWNPAVEDQAIDRV-----HRIGQRVDVRVS 57 Query: 169 YLIAQNTIDELVLQRLRTKSTI 190 YL+A++TI+E +L +K I Sbjct: 58 YLVAKDTIEERILIMQESKRQI 79 >gi|326797956|ref|YP_004315775.1| SNF2-related protein [Sphingobacterium sp. 21] gi|326548720|gb|ADZ77105.1| SNF2-related protein [Sphingobacterium sp. 21] Length = 1121 Score = 36.2 bits (82), Expect = 2.9, Method: Compositional matrix adjust. Identities = 26/93 (27%), Positives = 45/93 (48%), Gaps = 6/93 (6%) Query: 106 EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 +G++ + G GLNL + + WW+ Q I+RI + G K+ V Sbjct: 1017 DGRVKVFLMSLKVGGVGLNLT-EADYVYLIDPWWNPAVEDQAIDRI-----YRMGQKKNV 1070 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLLLNAL 198 LI + TI+E VLQ ++KS + L++++ Sbjct: 1071 IAVRLICKETIEEKVLQLQQSKSELFTKLIDSI 1103 >gi|224826766|ref|ZP_03699866.1| Non-specific serine/threonine protein kinase [Lutiella nitroferrum 2002] gi|224600986|gb|EEG07169.1| Non-specific serine/threonine protein kinase [Lutiella nitroferrum 2002] Length = 1370 Score = 36.2 bits (82), Expect = 2.9, Method: Compositional matrix adjust. Identities = 23/80 (28%), Positives = 38/80 (47%), Gaps = 6/80 (7%) Query: 118 SCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 + G GLNL + ++ WW+ +E R + G +R V VY L+A++TI+ Sbjct: 1278 AGGTGLNLT-AADYVIHLDPWWN-----PAVEDQASDRAHRMGQQRPVTVYRLVAEHTIE 1331 Query: 178 ELVLQRLRTKSTIQDLLLNA 197 E ++ K + D LL Sbjct: 1332 EQIVALHAAKRDLADSLLEG 1351 >gi|324505729|gb|ADY42457.1| DNA repair and recombination protein RAD54B [Ascaris suum] Length = 746 Score = 36.2 bits (82), Expect = 3.0, Method: Composition-based stats. Identities = 29/90 (32%), Positives = 41/90 (45%), Gaps = 8/90 (8%) Query: 101 IQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQ 158 + E+N +P + + G GLNL G + LV F W+ Q + RI + Sbjct: 601 VDEFNTSSLPNHVFLLSTKAGGVGLNL-IGASRLVLFDSDWNPAFDVQAMARIW-----R 654 Query: 159 AGFKRAVFVYYLIAQNTIDELVLQRLRTKS 188 G K +Y L+ TIDE +LQR KS Sbjct: 655 DGQKMPCHIYRLVTAGTIDEKILQRQVMKS 684 >gi|317121963|ref|YP_004101966.1| helicase [Thermaerobacter marianensis DSM 12885] gi|315591943|gb|ADU51239.1| helicase domain protein [Thermaerobacter marianensis DSM 12885] Length = 524 Score = 36.2 bits (82), Expect = 3.0, Method: Compositional matrix adjust. Identities = 31/89 (34%), Positives = 46/89 (51%), Gaps = 12/89 (13%) Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 G GLNLQ+ N+ V + L W+ +Q I RI Q A +V V+ L A+ TI+E Sbjct: 392 GQGLNLQFCRNV-VNYDLPWNPMRVEQRIGRIHRLGQEAA----SVRVFNLYARRTIEEY 446 Query: 180 VLQRLRTKSTI-------QDLLLNALKKE 201 +L+ L K + DL+L +L +E Sbjct: 447 ILRLLDEKINLFRQVIGEIDLILRSLDRE 475 >gi|159126264|gb|EDP51380.1| RSC complex subunit (Sth1), putative [Aspergillus fumigatus A1163] Length = 1406 Score = 36.2 bits (82), Expect = 3.0, Method: Compositional matrix adjust. Identities = 24/82 (29%), Positives = 42/82 (51%), Gaps = 6/82 (7%) Query: 118 SCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 + G GLNLQ +++F S W HQ + + R + G K V + LI+ N+++ Sbjct: 926 AGGLGLNLQTADTVIIFDSDW---NPHQDLQAQ---DRAHRIGQKNEVRILRLISSNSVE 979 Query: 178 ELVLQRLRTKSTIQDLLLNALK 199 E +L+R + K + ++ A K Sbjct: 980 EKILERAQFKLDMDGKVIQAGK 1001 >gi|164655795|ref|XP_001729026.1| hypothetical protein MGL_3814 [Malassezia globosa CBS 7966] gi|159102915|gb|EDP41812.1| hypothetical protein MGL_3814 [Malassezia globosa CBS 7966] Length = 1053 Score = 36.2 bits (82), Expect = 3.0, Method: Compositional matrix adjust. Identities = 21/78 (26%), Positives = 41/78 (52%), Gaps = 6/78 (7%) Query: 118 SCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 + G G+NL +++V F W+ + Q ++R + G K+ VFVY + ++I+ Sbjct: 562 AGGLGINLT-SADVVVLFDSDWNPQADLQAMDRA-----HRIGQKKQVFVYRFVTDHSIE 615 Query: 178 ELVLQRLRTKSTIQDLLL 195 E +L+R K + L++ Sbjct: 616 ERILERAAQKLRLDQLVI 633 >gi|121712712|ref|XP_001273967.1| RSC complex subunit (Sth1), putative [Aspergillus clavatus NRRL 1] gi|119402120|gb|EAW12541.1| RSC complex subunit (Sth1), putative [Aspergillus clavatus NRRL 1] Length = 1379 Score = 36.2 bits (82), Expect = 3.0, Method: Compositional matrix adjust. Identities = 24/82 (29%), Positives = 42/82 (51%), Gaps = 6/82 (7%) Query: 118 SCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 + G GLNLQ +++F S W HQ + + R + G K V + LI+ N+++ Sbjct: 929 AGGLGLNLQTADTVIIFDSDW---NPHQDLQAQ---DRAHRIGQKNEVRILRLISSNSVE 982 Query: 178 ELVLQRLRTKSTIQDLLLNALK 199 E +L+R + K + ++ A K Sbjct: 983 EKILERAQFKLDMDGKVIQAGK 1004 >gi|261334803|emb|CBH17797.1| DNA repair protein, putative [Trypanosoma brucei gambiense DAL972] Length = 762 Score = 36.2 bits (82), Expect = 3.0, Method: Compositional matrix adjust. Identities = 26/92 (28%), Positives = 43/92 (46%), Gaps = 6/92 (6%) Query: 109 IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVY 168 + ++ A + G GLNL ++LV WW+ IE V R + G ++ V V Sbjct: 625 VRVILASKTATGVGLNLTAANHVLV-VDPWWN-----PAIEEQAVHRCYRIGQRKHVHVK 678 Query: 169 YLIAQNTIDELVLQRLRTKSTIQDLLLNALKK 200 +I ++TI++ + R K D +L A K Sbjct: 679 RIIIEDTIEQYCYEICRRKKEFGDAILRAATK 710 >gi|167522321|ref|XP_001745498.1| hypothetical protein [Monosiga brevicollis MX1] gi|163775847|gb|EDQ89469.1| predicted protein [Monosiga brevicollis MX1] Length = 817 Score = 36.2 bits (82), Expect = 3.0, Method: Compositional matrix adjust. Identities = 20/78 (25%), Positives = 39/78 (50%), Gaps = 6/78 (7%) Query: 118 SCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 + G GLNL +++ S W ++ Q R + G + V +Y LI NT+D Sbjct: 663 AGGLGLNLVSADTCIIYDSDWNPQQDLQ------AQDRCHRIGQRNPVIIYRLITANTVD 716 Query: 178 ELVLQRLRTKSTIQDLLL 195 + +L+R +K ++ +++ Sbjct: 717 QRILERAESKRRLEKMVM 734 >gi|71755921|ref|XP_828875.1| DNA repair protein [Trypanosoma brucei TREU927] gi|70834261|gb|EAN79763.1| DNA repair protein, putative [Trypanosoma brucei] Length = 762 Score = 36.2 bits (82), Expect = 3.0, Method: Compositional matrix adjust. Identities = 26/92 (28%), Positives = 43/92 (46%), Gaps = 6/92 (6%) Query: 109 IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVY 168 + ++ A + G GLNL ++LV WW+ IE V R + G ++ V V Sbjct: 625 VRVILASKTATGVGLNLTAANHVLV-VDPWWN-----PAIEEQAVHRCYRIGQRKHVHVK 678 Query: 169 YLIAQNTIDELVLQRLRTKSTIQDLLLNALKK 200 +I ++TI++ + R K D +L A K Sbjct: 679 RIIIEDTIEQYCYEICRRKKEFGDAILRAATK 710 >gi|156741718|ref|YP_001431847.1| hypothetical protein Rcas_1737 [Roseiflexus castenholzii DSM 13941] gi|156233046|gb|ABU57829.1| protein of unknown function DUF224 cysteine-rich region domain protein [Roseiflexus castenholzii DSM 13941] Length = 1024 Score = 36.2 bits (82), Expect = 3.0, Method: Composition-based stats. Identities = 19/59 (32%), Positives = 28/59 (47%) Query: 38 GAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDK 96 G Y KH+ E+ EKI A E + N AP+ V +H + + R+ + R L K Sbjct: 734 GIEYNITAKHYSEIVAEKIHASEFAFPQTNRAPVTVTWHDSCHIGRVSGVYEPPRDLIK 792 >gi|38014266|gb|AAH01474.2| RAD54L2 protein [Homo sapiens] Length = 1159 Score = 36.2 bits (82), Expect = 3.0, Method: Composition-based stats. Identities = 29/114 (25%), Positives = 53/114 (46%), Gaps = 14/114 (12%) Query: 87 AFPQGRTLDK--DPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEH 144 AF + R +++ DP + W L + A C G+NL ++VF + W + Sbjct: 483 AFERERLINQFNDPSNLTTW-----LFLLSTRAGC-LGVNLIGANRVVVFDASWNPCHDA 536 Query: 145 QQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNAL 198 Q V R + G K+ F+Y L+A T+++ + R +K + D +++ L Sbjct: 537 Q------AVCRVYRYGQKKPCFIYRLVADYTLEKKIYDRQISKQGMSDRVVDDL 584 >gi|296809533|ref|XP_002845105.1| helicase [Arthroderma otae CBS 113480] gi|238844588|gb|EEQ34250.1| helicase [Arthroderma otae CBS 113480] Length = 869 Score = 36.2 bits (82), Expect = 3.1, Method: Compositional matrix adjust. Identities = 23/79 (29%), Positives = 40/79 (50%), Gaps = 12/79 (15%) Query: 120 GHGLNLQYGGNILVFFSLW---WDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTI 176 G G+NL +++F S W DL+ Q RIG T+ V VY L + T+ Sbjct: 705 GQGINLTAADTVILFDSDWNPQQDLQ-AQDRAHRIGQTK--------PVIVYRLATRGTV 755 Query: 177 DELVLQRLRTKSTIQDLLL 195 ++ +L+R +K ++ L++ Sbjct: 756 EQTLLERAGSKRRLEKLVI 774 >gi|146419456|ref|XP_001485690.1| hypothetical protein PGUG_01361 [Meyerozyma guilliermondii ATCC 6260] Length = 1103 Score = 36.2 bits (82), Expect = 3.1, Method: Compositional matrix adjust. Identities = 47/191 (24%), Positives = 81/191 (42%), Gaps = 42/191 (21%) Query: 18 ENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHF 77 E F ++K KC++L N + K+LE EK IIV F Sbjct: 914 EETNGFTPSTKIEKCIELVNQI---------------RTKSLE---EK-----IIVFSQF 950 Query: 78 NS--DLARL---QKAFPQGR-----TLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQY 127 + DL +L +K P R +LD TI+ + +G +L + GL L Sbjct: 951 TTLFDLMKLVLDKKGIPFLRYDGSMSLDARNNTIKNFYQGLTQVLLISLRAGNVGLTLTC 1010 Query: 128 GGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTK 187 ++++ W E Q M R + G +R VFV+ ++ +TI+ +++ + K Sbjct: 1011 ANHVILMDPFWNPFVEEQAM------DRAHRIGQQREVFVHRILLNDTIEGRIMELQKYK 1064 Query: 188 STIQDLLLNAL 198 ++++ NAL Sbjct: 1065 ---KEMVQNAL 1072 >gi|119498495|ref|XP_001266005.1| RSC complex subunit (Sth1), putative [Neosartorya fischeri NRRL 181] gi|119414169|gb|EAW24108.1| RSC complex subunit (Sth1), putative [Neosartorya fischeri NRRL 181] Length = 1405 Score = 36.2 bits (82), Expect = 3.1, Method: Compositional matrix adjust. Identities = 24/82 (29%), Positives = 42/82 (51%), Gaps = 6/82 (7%) Query: 118 SCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 + G GLNLQ +++F S W HQ + + R + G K V + LI+ N+++ Sbjct: 925 AGGLGLNLQTADTVIIFDSDW---NPHQDLQAQ---DRAHRIGQKNEVRILRLISSNSVE 978 Query: 178 ELVLQRLRTKSTIQDLLLNALK 199 E +L+R + K + ++ A K Sbjct: 979 EKILERAQFKLDMDGKVIQAGK 1000 >gi|33146888|dbj|BAC79886.1| putative DNA repair protein rhp54 [Oryza sativa Japonica Group] Length = 637 Score = 36.2 bits (82), Expect = 3.1, Method: Compositional matrix adjust. Identities = 23/72 (31%), Positives = 36/72 (50%), Gaps = 6/72 (8%) Query: 107 GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVF 166 GK +L A +C G++L G + LV W+ + +Q I R + G +R V+ Sbjct: 515 GKRKVLIASTTACAEGISLT-GASRLVMLDSEWNHSKTRQAI-----ARAFRRGQERTVY 568 Query: 167 VYYLIAQNTIDE 178 VY L+A T +E Sbjct: 569 VYLLVASGTWEE 580 >gi|26340760|dbj|BAC34042.1| unnamed protein product [Mus musculus] Length = 904 Score = 36.2 bits (82), Expect = 3.1, Method: Compositional matrix adjust. Identities = 24/84 (28%), Positives = 40/84 (47%), Gaps = 6/84 (7%) Query: 118 SCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 + G GL ++ VF L+WD +Q +R + G +V ++YLIA T+D Sbjct: 234 AAGQGLTFTAASHV-VFAELYWDPGHIKQAEDRA-----HRIGQCSSVNIHYLIANGTLD 287 Query: 178 ELVLQRLRTKSTIQDLLLNALKKE 201 L+ L K+ + LN K++ Sbjct: 288 SLMWAMLNRKAQVTGSTLNGRKEK 311 >gi|26988870|ref|NP_744295.1| Snf2/Rad54 family helicase [Pseudomonas putida KT2440] gi|24983677|gb|AAN67759.1|AE016407_3 helicase, SNF2/RAD54 family [Pseudomonas putida KT2440] Length = 666 Score = 36.2 bits (82), Expect = 3.1, Method: Composition-based stats. Identities = 26/115 (22%), Positives = 54/115 (46%), Gaps = 7/115 (6%) Query: 83 RLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLE 142 +++ + G T D+ +Q++ +G+ + + G GLNL + ++ F WW+ Sbjct: 533 KIRYSLLTGDTRDRR-TPVQQFQQGESEVFLISLKAGGVGLNLTA-ADTVIHFDPWWNPA 590 Query: 143 EHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 Q + R + G + VFV+ LI + T++E + + K+ + LL+ Sbjct: 591 SENQATD-----RAYRIGQDKPVFVFKLITRGTVEEKIQLLQQEKAALAASLLDG 640 >gi|322825950|gb|EFZ30762.1| DNA helicase, putative [Trypanosoma cruzi] Length = 914 Score = 36.2 bits (82), Expect = 3.1, Method: Composition-based stats. Identities = 24/78 (30%), Positives = 38/78 (48%), Gaps = 6/78 (7%) Query: 118 SCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 SCG G NL ++VF L W+ H Q +R+ + G A + YL+A+ T D Sbjct: 555 SCGVGHNLTCA-TMVVFAELDWNPSTHLQCEDRV-----HRMGQSSACVIKYLLAEGTSD 608 Query: 178 ELVLQRLRTKSTIQDLLL 195 ++ L+TK + +L Sbjct: 609 SVIWPMLQTKLNVTHAVL 626 >gi|241950577|ref|XP_002418011.1| DNA repair protein, putative [Candida dubliniensis CD36] gi|223641350|emb|CAX43310.1| DNA repair protein, putative [Candida dubliniensis CD36] Length = 1088 Score = 36.2 bits (82), Expect = 3.1, Method: Compositional matrix adjust. Identities = 24/81 (29%), Positives = 35/81 (43%), Gaps = 6/81 (7%) Query: 102 QEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGF 161 Q + GKI +L +CG GLNL + WW Q I+RI + G Sbjct: 981 QPLDNGKIAILLLSLKACGVGLNLTTASRAYM-MDPWWSPSIEDQAIDRI-----HRIGQ 1034 Query: 162 KRAVFVYYLIAQNTIDELVLQ 182 V V I +N+I+ +L+ Sbjct: 1035 NETVKVVRFIMENSIETKMLK 1055 >gi|71648872|ref|XP_813216.1| DNA helicase [Trypanosoma cruzi strain CL Brener] gi|70878080|gb|EAN91365.1| DNA helicase, putative [Trypanosoma cruzi] Length = 744 Score = 36.2 bits (82), Expect = 3.1, Method: Composition-based stats. Identities = 24/78 (30%), Positives = 38/78 (48%), Gaps = 6/78 (7%) Query: 118 SCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 SCG G NL ++VF L W+ H Q +R+ + G A + YL+A+ T D Sbjct: 385 SCGVGHNLTCA-TMVVFAELDWNPSTHLQCEDRV-----HRMGQSSACVIKYLLAEGTSD 438 Query: 178 ELVLQRLRTKSTIQDLLL 195 ++ L+TK + +L Sbjct: 439 SVIWPMLQTKLNVTHAVL 456 >gi|71653795|ref|XP_815529.1| DNA helicase [Trypanosoma cruzi strain CL Brener] gi|70880590|gb|EAN93678.1| DNA helicase, putative [Trypanosoma cruzi] Length = 938 Score = 36.2 bits (82), Expect = 3.1, Method: Composition-based stats. Identities = 24/78 (30%), Positives = 38/78 (48%), Gaps = 6/78 (7%) Query: 118 SCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 SCG G NL ++VF L W+ H Q +R+ + G A + YL+A+ T D Sbjct: 579 SCGVGHNLTCA-TMVVFAELDWNPSTHLQCEDRV-----HRMGQSSACVIKYLLAEGTSD 632 Query: 178 ELVLQRLRTKSTIQDLLL 195 ++ L+TK + +L Sbjct: 633 SVIWPMLQTKLNVTHAVL 650 >gi|317138645|ref|XP_001817051.2| chromatin structure-remodeling complex subunit snf2 [Aspergillus oryzae RIB40] Length = 1422 Score = 35.8 bits (81), Expect = 3.2, Method: Compositional matrix adjust. Identities = 24/82 (29%), Positives = 42/82 (51%), Gaps = 6/82 (7%) Query: 118 SCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 + G GLNLQ +++F S W HQ + + R + G K V + LI+ N+++ Sbjct: 940 AGGLGLNLQSADTVIIFDSDW---NPHQDLQAQ---DRAHRIGQKNEVRILRLISSNSVE 993 Query: 178 ELVLQRLRTKSTIQDLLLNALK 199 E +L+R + K + ++ A K Sbjct: 994 EKILERAQFKLDMDGKVIQAGK 1015 >gi|114658983|ref|XP_001170738.1| PREDICTED: chromodomain helicase DNA binding protein 2 isoform 7 [Pan troglodytes] Length = 1777 Score = 35.8 bits (81), Expect = 3.2, Method: Compositional matrix adjust. Identities = 19/79 (24%), Positives = 39/79 (49%), Gaps = 6/79 (7%) Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 G G+NL +++F S W + Q R + G K+ V +Y L+ + T++E Sbjct: 820 GLGINLASADTVVIFDSDWNPQNDLQ------AQARAHRIGQKKQVNIYRLVTKGTVEEE 873 Query: 180 VLQRLRTKSTIQDLLLNAL 198 +++R + K + L++ + Sbjct: 874 IIERAKKKMVLDHLVIQRM 892 >gi|323449633|gb|EGB05519.1| hypothetical protein AURANDRAFT_30762 [Aureococcus anophagefferens] Length = 603 Score = 35.8 bits (81), Expect = 3.2, Method: Compositional matrix adjust. Identities = 29/94 (30%), Positives = 45/94 (47%), Gaps = 11/94 (11%) Query: 105 NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA 164 +E KI L + G G+NL ++++ + W + Q M R + G + Sbjct: 519 SESKIFLYLISTRAGGQGINLATADTVVLYDTCWNPQVDLQAM------DRAHRIGQRGQ 572 Query: 165 VFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNAL 198 V VY LIA++T++E V R Q LLL+AL Sbjct: 573 VTVYRLIARDTVEEKVHARAH-----QKLLLDAL 601 >gi|118095916|ref|XP_413879.2| PREDICTED: similar to chromodomain helicase DNA binding protein 2 [Gallus gallus] Length = 1837 Score = 35.8 bits (81), Expect = 3.2, Method: Compositional matrix adjust. Identities = 19/79 (24%), Positives = 39/79 (49%), Gaps = 6/79 (7%) Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 G G+NL +++F S W + Q R + G K+ V +Y L+ + T++E Sbjct: 874 GLGINLASADTVVIFDSDWNPQNDLQ------AQARAHRIGQKKQVNIYRLVTKGTVEEE 927 Query: 180 VLQRLRTKSTIQDLLLNAL 198 +++R + K + L++ + Sbjct: 928 IIERAKKKMVLDHLVIQRM 946 >gi|309358145|emb|CAP34504.2| CBR-ISW-1 protein [Caenorhabditis briggsae AF16] Length = 1019 Score = 35.8 bits (81), Expect = 3.2, Method: Compositional matrix adjust. Identities = 19/78 (24%), Positives = 41/78 (52%), Gaps = 6/78 (7%) Query: 118 SCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 + G G+NL ++++ S W + Q M R + G K+ V V+ LI +NT+D Sbjct: 517 AGGLGINLATADVVIIYDSDWNPQSDLQAM------DRAHRIGQKKQVKVFRLITENTVD 570 Query: 178 ELVLQRLRTKSTIQDLLL 195 + ++++ K + ++++ Sbjct: 571 DRIIEKAEAKLRLDNIVI 588 >gi|251795916|ref|YP_003010647.1| SNF2-related protein [Paenibacillus sp. JDR-2] gi|247543542|gb|ACT00561.1| SNF2-related protein [Paenibacillus sp. JDR-2] Length = 1088 Score = 35.8 bits (81), Expect = 3.2, Method: Compositional matrix adjust. Identities = 25/92 (27%), Positives = 43/92 (46%), Gaps = 7/92 (7%) Query: 104 WNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKR 163 +N+G+ + A + G GLNL + + + LWW+ QQ R + G + Sbjct: 975 FNDGEKDIFLASLKAGGTGLNLTGADTV-ILYDLWWNPAVEQQ-----AADRAHRIGQTK 1028 Query: 164 AVFVYYLIAQNTI-DELVLQRLRTKSTIQDLL 194 V V L A T+ D++ + R K+ I D++ Sbjct: 1029 VVQVIRLAAHGTVEDKMYALQERKKNMIDDII 1060 >gi|73951135|ref|XP_859122.1| PREDICTED: similar to Chromodomain-helicase-DNA-binding protein 2 (CHD-2) isoform 6 [Canis familiaris] Length = 1836 Score = 35.8 bits (81), Expect = 3.2, Method: Compositional matrix adjust. Identities = 19/79 (24%), Positives = 39/79 (49%), Gaps = 6/79 (7%) Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 G G+NL +++F S W + Q R + G K+ V +Y L+ + T++E Sbjct: 880 GLGINLASADTVVIFDSDWNPQNDLQ------AQARAHRIGQKKQVNIYRLVTKGTVEEE 933 Query: 180 VLQRLRTKSTIQDLLLNAL 198 +++R + K + L++ + Sbjct: 934 IIERAKKKMVLDHLVIQRM 952 >gi|326926799|ref|XP_003209584.1| PREDICTED: chromodomain-helicase-DNA-binding protein 2-like [Meleagris gallopavo] Length = 1837 Score = 35.8 bits (81), Expect = 3.2, Method: Compositional matrix adjust. Identities = 19/79 (24%), Positives = 39/79 (49%), Gaps = 6/79 (7%) Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 G G+NL +++F S W + Q R + G K+ V +Y L+ + T++E Sbjct: 874 GLGINLASADTVVIFDSDWNPQNDLQ------AQARAHRIGQKKQVNIYRLVTKGTVEEE 927 Query: 180 VLQRLRTKSTIQDLLLNAL 198 +++R + K + L++ + Sbjct: 928 IIERAKKKMVLDHLVIQRM 946 >gi|194038394|ref|XP_001926393.1| PREDICTED: chromodomain-helicase-DNA-binding protein 2 [Sus scrofa] Length = 1828 Score = 35.8 bits (81), Expect = 3.2, Method: Compositional matrix adjust. Identities = 19/79 (24%), Positives = 39/79 (49%), Gaps = 6/79 (7%) Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 G G+NL +++F S W + Q R + G K+ V +Y L+ + T++E Sbjct: 871 GLGINLASADTVVIFDSDWNPQNDLQ------AQARAHRIGQKKQVNIYRLVTKGTVEEE 924 Query: 180 VLQRLRTKSTIQDLLLNAL 198 +++R + K + L++ + Sbjct: 925 IIERAKKKMVLDHLVIQRM 943 >gi|126276965|ref|XP_001365054.1| PREDICTED: similar to chromodomain helicase DNA binding protein 2 [Monodelphis domestica] Length = 1836 Score = 35.8 bits (81), Expect = 3.2, Method: Compositional matrix adjust. Identities = 19/79 (24%), Positives = 39/79 (49%), Gaps = 6/79 (7%) Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 G G+NL +++F S W + Q R + G K+ V +Y L+ + T++E Sbjct: 878 GLGINLASADTVVIFDSDWNPQNDLQAQ------ARAHRIGQKKQVNIYRLVTKGTVEEE 931 Query: 180 VLQRLRTKSTIQDLLLNAL 198 +++R + K + L++ + Sbjct: 932 IIERAKKKMVLDHLVIQRM 950 >gi|73951151|ref|XP_859429.1| PREDICTED: similar to Chromodomain-helicase-DNA-binding protein 2 (CHD-2) isoform 14 [Canis familiaris] Length = 1809 Score = 35.8 bits (81), Expect = 3.2, Method: Compositional matrix adjust. Identities = 19/79 (24%), Positives = 39/79 (49%), Gaps = 6/79 (7%) Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 G G+NL +++F S W + Q R + G K+ V +Y L+ + T++E Sbjct: 853 GLGINLASADTVVIFDSDWNPQNDLQ------AQARAHRIGQKKQVNIYRLVTKGTVEEE 906 Query: 180 VLQRLRTKSTIQDLLLNAL 198 +++R + K + L++ + Sbjct: 907 IIERAKKKMVLDHLVIQRM 925 >gi|83764905|dbj|BAE55049.1| unnamed protein product [Aspergillus oryzae] Length = 1417 Score = 35.8 bits (81), Expect = 3.2, Method: Compositional matrix adjust. Identities = 24/82 (29%), Positives = 42/82 (51%), Gaps = 6/82 (7%) Query: 118 SCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 + G GLNLQ +++F S W HQ + + R + G K V + LI+ N+++ Sbjct: 935 AGGLGLNLQSADTVIIFDSDW---NPHQDLQAQ---DRAHRIGQKNEVRILRLISSNSVE 988 Query: 178 ELVLQRLRTKSTIQDLLLNALK 199 E +L+R + K + ++ A K Sbjct: 989 EKILERAQFKLDMDGKVIQAGK 1010 >gi|70943600|ref|XP_741826.1| hypothetical protein [Plasmodium chabaudi chabaudi] gi|56520453|emb|CAH80960.1| hypothetical protein PC000341.04.0 [Plasmodium chabaudi chabaudi] Length = 154 Score = 35.8 bits (81), Expect = 3.2, Method: Compositional matrix adjust. Identities = 23/88 (26%), Positives = 40/88 (45%), Gaps = 6/88 (6%) Query: 105 NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA 164 N+ ++ +L + G GLNLQ I + WW+ Q I+ R + G + Sbjct: 49 NDKQLRVLLISLKAGGEGLNLQVANRIFI-VDPWWNPAAELQAIQ-----RAHRIGQTKT 102 Query: 165 VFVYYLIAQNTIDELVLQRLRTKSTIQD 192 V+ I +NT++E ++Q K + D Sbjct: 103 VYAIRFIIENTVEEKIIQLQNKKQLVFD 130 >gi|15615476|ref|NP_243779.1| SNF2 helicase [Bacillus halodurans C-125] gi|10175535|dbj|BAB06632.1| SNF2 helicase [Bacillus halodurans C-125] Length = 995 Score = 35.8 bits (81), Expect = 3.2, Method: Compositional matrix adjust. Identities = 23/93 (24%), Positives = 44/93 (47%), Gaps = 6/93 (6%) Query: 105 NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA 164 N+ ++P+ + G GLNL N ++ + WW+ +E R + G Sbjct: 890 NDRELPIFILSLKAGGVGLNLTA-ANHVIHYDRWWN-----PAVENQATDRAYRIGQTAD 943 Query: 165 VFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 V V+ L+ + T++E + Q L +K + + +L A Sbjct: 944 VTVHKLMTEGTLEERIHQMLESKQALAEQILTA 976 >gi|297297256|ref|XP_002808499.1| PREDICTED: LOW QUALITY PROTEIN: chromodomain-helicase-DNA-binding protein 2-like [Macaca mulatta] Length = 1806 Score = 35.8 bits (81), Expect = 3.3, Method: Compositional matrix adjust. Identities = 19/81 (23%), Positives = 40/81 (49%), Gaps = 6/81 (7%) Query: 118 SCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 + G G+NL +++F S W + Q R + G K+ V +Y L+ + T++ Sbjct: 847 AGGLGINLASADTVVIFDSDWNPQNDLQ------AQARAHRIGQKKQVNIYRLVTKGTVE 900 Query: 178 ELVLQRLRTKSTIQDLLLNAL 198 E +++R + K + L++ + Sbjct: 901 EEIIERAKKKMVLDHLVIQRM 921 >gi|240169371|ref|ZP_04748030.1| SNF2 family helicase [Mycobacterium kansasii ATCC 12478] Length = 2150 Score = 35.8 bits (81), Expect = 3.3, Method: Composition-based stats. Identities = 32/110 (29%), Positives = 51/110 (46%), Gaps = 6/110 (5%) Query: 86 KAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQ 145 +AF + + TI + G+ P++ + A G NLQ+ N ++ + L W+ + Sbjct: 539 RAFHGSMSASERAATIAAFRSGEAPVMISTDAG-AEGQNLQFC-NCVLNYDLPWNPMRIE 596 Query: 146 QMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 Q I R+ R + VFV L A TIDE V + L K + +LL Sbjct: 597 QRIGRV----DRLTQPRDEVFVANLYACRTIDESVYRLLAEKLRMFELLF 642 >gi|114658989|ref|XP_001170614.1| PREDICTED: chromodomain helicase DNA binding protein 2 isoform 1 [Pan troglodytes] Length = 1531 Score = 35.8 bits (81), Expect = 3.3, Method: Compositional matrix adjust. Identities = 19/79 (24%), Positives = 39/79 (49%), Gaps = 6/79 (7%) Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 G G+NL +++F S W + Q R + G K+ V +Y L+ + T++E Sbjct: 871 GLGINLASADTVVIFDSDWNPQNDLQAQ------ARAHRIGQKKQVNIYRLVTKGTVEEE 924 Query: 180 VLQRLRTKSTIQDLLLNAL 198 +++R + K + L++ + Sbjct: 925 IIERAKKKMVLDHLVIQRM 943 >gi|73951147|ref|XP_859355.1| PREDICTED: similar to Chromodomain-helicase-DNA-binding protein 2 (CHD-2) isoform 12 [Canis familiaris] Length = 1851 Score = 35.8 bits (81), Expect = 3.3, Method: Compositional matrix adjust. Identities = 19/79 (24%), Positives = 39/79 (49%), Gaps = 6/79 (7%) Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 G G+NL +++F S W + Q R + G K+ V +Y L+ + T++E Sbjct: 871 GLGINLASADTVVIFDSDWNPQNDLQ------AQARAHRIGQKKQVNIYRLVTKGTVEEE 924 Query: 180 VLQRLRTKSTIQDLLLNAL 198 +++R + K + L++ + Sbjct: 925 IIERAKKKMVLDHLVIQRM 943 >gi|62319947|dbj|BAD94038.1| pseudogene [Arabidopsis thaliana] Length = 1221 Score = 35.8 bits (81), Expect = 3.3, Method: Compositional matrix adjust. Identities = 20/84 (23%), Positives = 40/84 (47%), Gaps = 6/84 (7%) Query: 118 SCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 + G G+NL +++F S W + Q M +R + G + V +Y + +++ Sbjct: 1017 AGGLGINLATADTVVIFDSDWNPQNDLQAM------SRAHRIGQQEVVNIYRFVTSKSVE 1070 Query: 178 ELVLQRLRTKSTIQDLLLNALKKE 201 E +L+R + K + L++ L E Sbjct: 1071 EEILERAKRKMVLDHLVIQKLNAE 1094 >gi|320582398|gb|EFW96615.1| DNA helicase [Pichia angusta DL-1] Length = 1219 Score = 35.8 bits (81), Expect = 3.3, Method: Compositional matrix adjust. Identities = 23/82 (28%), Positives = 41/82 (50%), Gaps = 6/82 (7%) Query: 118 SCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 + G GLNLQ +++F + W HQ + R + G K V + LI +++++ Sbjct: 844 AGGLGLNLQTADTVIIFDTDW---NPHQDL---QAQDRAHRIGQKNEVRILRLITEDSVE 897 Query: 178 ELVLQRLRTKSTIQDLLLNALK 199 E++L+R K I ++ A K Sbjct: 898 EVILERAHQKLDIDGKVIQAGK 919 >gi|114658975|ref|XP_001170775.1| PREDICTED: chromodomain helicase DNA binding protein 2 isoform 9 [Pan troglodytes] Length = 1834 Score = 35.8 bits (81), Expect = 3.3, Method: Compositional matrix adjust. Identities = 19/79 (24%), Positives = 39/79 (49%), Gaps = 6/79 (7%) Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 G G+NL +++F S W + Q R + G K+ V +Y L+ + T++E Sbjct: 877 GLGINLASADTVVIFDSDWNPQNDLQ------AQARAHRIGQKKQVNIYRLVTKGTVEEE 930 Query: 180 VLQRLRTKSTIQDLLLNAL 198 +++R + K + L++ + Sbjct: 931 IIERAKKKMVLDHLVIQRM 949 >gi|73951141|ref|XP_859244.1| PREDICTED: similar to Chromodomain-helicase-DNA-binding protein 2 (CHD-2) isoform 9 [Canis familiaris] Length = 1807 Score = 35.8 bits (81), Expect = 3.3, Method: Compositional matrix adjust. Identities = 19/79 (24%), Positives = 39/79 (49%), Gaps = 6/79 (7%) Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 G G+NL +++F S W + Q R + G K+ V +Y L+ + T++E Sbjct: 856 GLGINLASADTVVIFDSDWNPQNDLQ------AQARAHRIGQKKQVNIYRLVTKGTVEEE 909 Query: 180 VLQRLRTKSTIQDLLLNAL 198 +++R + K + L++ + Sbjct: 910 IIERAKKKMVLDHLVIQRM 928 >gi|268573820|ref|XP_002641887.1| C. briggsae CBR-ISW-1 protein [Caenorhabditis briggsae] Length = 1012 Score = 35.8 bits (81), Expect = 3.3, Method: Compositional matrix adjust. Identities = 19/78 (24%), Positives = 41/78 (52%), Gaps = 6/78 (7%) Query: 118 SCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 + G G+NL ++++ S W + Q M R + G K+ V V+ LI +NT+D Sbjct: 517 AGGLGINLATADVVIIYDSDWNPQSDLQAM------DRAHRIGQKKQVKVFRLITENTVD 570 Query: 178 ELVLQRLRTKSTIQDLLL 195 + ++++ K + ++++ Sbjct: 571 DRIIEKAEAKLRLDNIVI 588 >gi|322701620|gb|EFY93369.1| SNF2 family helicase/ATPase [Metarhizium acridum CQMa 102] Length = 1677 Score = 35.8 bits (81), Expect = 3.3, Method: Compositional matrix adjust. Identities = 23/98 (23%), Positives = 42/98 (42%), Gaps = 10/98 (10%) Query: 81 LARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWD 140 +RL P + D+ I+++N + L + G GLN+Q +++ S W Sbjct: 1208 FSRLDGGTPIAKRQDE----IKKFNANQTELYLISTRAGGVGLNIQGANKVVILDSKWNP 1263 Query: 141 LEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDE 178 + E Q + R + G + V VYY + T ++ Sbjct: 1264 VHEQQ------AIGRSYRIGQSKPVSVYYFVTAGTFEQ 1295 >gi|77164070|ref|YP_342595.1| helicase-like [Nitrosococcus oceani ATCC 19707] gi|254435267|ref|ZP_05048774.1| Helicase conserved C-terminal domain protein [Nitrosococcus oceani AFC27] gi|76882384|gb|ABA57065.1| Helicase-like protein [Nitrosococcus oceani ATCC 19707] gi|207088378|gb|EDZ65650.1| Helicase conserved C-terminal domain protein [Nitrosococcus oceani AFC27] Length = 910 Score = 35.8 bits (81), Expect = 3.3, Method: Composition-based stats. Identities = 32/102 (31%), Positives = 50/102 (49%), Gaps = 10/102 (9%) Query: 106 EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 E ++ L+ A A+C GLNLQ G L+ L W+ +Q + RI +R + V Sbjct: 757 EREVRLMVATDAAC-EGLNLQMLGT-LINVDLPWNPTRLEQRLGRI----KRLGQLRENV 810 Query: 166 FVYYLIAQNTIDELVLQRL----RTKSTIQDLLLNALKKETI 203 + L+ Q T+DE + +RL R + + L + LK E I Sbjct: 811 DMLNLVYQGTVDETIYERLSERMRDRYDLFGALPDTLKDEWI 852 >gi|290998710|ref|XP_002681923.1| SNF2 domain-containing protein [Naegleria gruberi] gi|284095549|gb|EFC49179.1| SNF2 domain-containing protein [Naegleria gruberi] Length = 1231 Score = 35.8 bits (81), Expect = 3.3, Method: Compositional matrix adjust. Identities = 23/77 (29%), Positives = 39/77 (50%), Gaps = 10/77 (12%) Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQM--IERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 G G+ L ++ + S W + Q M + RIG T+ V +Y LI +N+++ Sbjct: 1114 GLGITLTAADTVIFYDSDWNPTLDAQAMDRVHRIGQTK--------PVTIYRLITKNSVE 1165 Query: 178 ELVLQRLRTKSTIQDLL 194 E +L + KSTIQ+ + Sbjct: 1166 ERILAIAKQKSTIQETV 1182 >gi|224104242|ref|XP_002313369.1| chromatin remodeling complex subunit [Populus trichocarpa] gi|222849777|gb|EEE87324.1| chromatin remodeling complex subunit [Populus trichocarpa] Length = 1748 Score = 35.8 bits (81), Expect = 3.3, Method: Compositional matrix adjust. Identities = 20/84 (23%), Positives = 40/84 (47%), Gaps = 6/84 (7%) Query: 118 SCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 + G G+NL +++F S W + Q M +R + G + V +Y + +++ Sbjct: 1002 AGGLGINLATADTVIIFDSDWNPQNDLQAM------SRAHRIGQQEVVNIYRFVTSKSVE 1055 Query: 178 ELVLQRLRTKSTIQDLLLNALKKE 201 E +L+R + K + L++ L E Sbjct: 1056 EDILERAKKKMVLDHLVIQKLNAE 1079 >gi|114658987|ref|XP_001170658.1| PREDICTED: chromodomain helicase DNA binding protein 2 isoform 3 [Pan troglodytes] Length = 1603 Score = 35.8 bits (81), Expect = 3.3, Method: Compositional matrix adjust. Identities = 19/79 (24%), Positives = 39/79 (49%), Gaps = 6/79 (7%) Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 G G+NL +++F S W + Q R + G K+ V +Y L+ + T++E Sbjct: 871 GLGINLASADTVVIFDSDWNPQNDLQ------AQARAHRIGQKKQVNIYRLVTKGTVEEE 924 Query: 180 VLQRLRTKSTIQDLLLNAL 198 +++R + K + L++ + Sbjct: 925 IIERAKKKMVLDHLVIQRM 943 >gi|327283794|ref|XP_003226625.1| PREDICTED: LOW QUALITY PROTEIN: chromodomain-helicase-DNA-binding protein 2-like [Anolis carolinensis] Length = 1863 Score = 35.8 bits (81), Expect = 3.4, Method: Compositional matrix adjust. Identities = 19/79 (24%), Positives = 39/79 (49%), Gaps = 6/79 (7%) Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 G G+NL +++F S W + Q R + G K+ V +Y L+ + T++E Sbjct: 904 GLGINLASADTVVIFDSDWNPQNDLQAQ------ARAHRIGQKKQVNIYRLVTKGTVEEE 957 Query: 180 VLQRLRTKSTIQDLLLNAL 198 +++R + K + L++ + Sbjct: 958 IIERAKKKMVLDHLVIQRM 976 >gi|149691012|ref|XP_001488063.1| PREDICTED: chromodomain helicase DNA binding protein 2 isoform 1 [Equus caballus] Length = 1828 Score = 35.8 bits (81), Expect = 3.4, Method: Compositional matrix adjust. Identities = 19/79 (24%), Positives = 39/79 (49%), Gaps = 6/79 (7%) Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 G G+NL +++F S W + Q R + G K+ V +Y L+ + T++E Sbjct: 871 GLGINLASADTVVIFDSDWNPQNDLQ------AQARAHRIGQKKQVNIYRLVTKGTVEEE 924 Query: 180 VLQRLRTKSTIQDLLLNAL 198 +++R + K + L++ + Sbjct: 925 IIERAKKKMVLDHLVIQRM 943 >gi|73951139|ref|XP_859203.1| PREDICTED: similar to Chromodomain-helicase-DNA-binding protein 2 (CHD-2) isoform 8 [Canis familiaris] Length = 1839 Score = 35.8 bits (81), Expect = 3.4, Method: Compositional matrix adjust. Identities = 19/79 (24%), Positives = 39/79 (49%), Gaps = 6/79 (7%) Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 G G+NL +++F S W + Q R + G K+ V +Y L+ + T++E Sbjct: 856 GLGINLASADTVVIFDSDWNPQNDLQ------AQARAHRIGQKKQVNIYRLVTKGTVEEE 909 Query: 180 VLQRLRTKSTIQDLLLNAL 198 +++R + K + L++ + Sbjct: 910 IIERAKKKMVLDHLVIQRM 928 >gi|156845664|ref|XP_001645722.1| hypothetical protein Kpol_1043p54 [Vanderwaltozyma polyspora DSM 70294] gi|156116389|gb|EDO17864.1| hypothetical protein Kpol_1043p54 [Vanderwaltozyma polyspora DSM 70294] Length = 1725 Score = 35.8 bits (81), Expect = 3.4, Method: Compositional matrix adjust. Identities = 23/82 (28%), Positives = 41/82 (50%), Gaps = 6/82 (7%) Query: 118 SCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 + G GLNLQ +++F + W HQ + + R + G K V + LI +N+++ Sbjct: 1176 AGGLGLNLQTADTVIIFDTDW---NPHQDLQAQ---DRAHRIGQKNEVRILRLITENSVE 1229 Query: 178 ELVLQRLRTKSTIQDLLLNALK 199 E +L++ K I ++ A K Sbjct: 1230 EAILEKAHKKLDIDGKVIQAGK 1251 >gi|297835980|ref|XP_002885872.1| hypothetical protein ARALYDRAFT_480306 [Arabidopsis lyrata subsp. lyrata] gi|297331712|gb|EFH62131.1| hypothetical protein ARALYDRAFT_480306 [Arabidopsis lyrata subsp. lyrata] Length = 1721 Score = 35.8 bits (81), Expect = 3.4, Method: Compositional matrix adjust. Identities = 20/84 (23%), Positives = 40/84 (47%), Gaps = 6/84 (7%) Query: 118 SCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 + G G+NL +++F S W + Q M +R + G + V +Y + +++ Sbjct: 1014 AGGLGINLATADTVVIFDSDWNPQNDLQAM------SRAHRIGQQEVVNIYRFVTSKSVE 1067 Query: 178 ELVLQRLRTKSTIQDLLLNALKKE 201 E +L+R + K + L++ L E Sbjct: 1068 EEILERAKRKMVLDHLVIQKLNAE 1091 >gi|221055808|ref|XP_002259042.1| snf2 family n-terminal domain [Plasmodium knowlesi strain H] gi|193809113|emb|CAQ39815.1| snf2 family n-terminal domain, putative [Plasmodium knowlesi strain H] Length = 1382 Score = 35.8 bits (81), Expect = 3.4, Method: Compositional matrix adjust. Identities = 26/108 (24%), Positives = 52/108 (48%), Gaps = 9/108 (8%) Query: 91 GRTL-DKDPCTIQEWNE--GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQM 147 G T+ D+ I ++NE K + + G G+NL +++F S ++ Sbjct: 654 GSTVGDERQIRINQFNEPNSKYFIFLLSTRAGGIGINLTTADIVILFDS------DYNPQ 707 Query: 148 IERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 ++ + R + G K+ V VY + QNT++E +++R K + L++ Sbjct: 708 MDIQAMDRAHRIGQKKKVIVYRFVTQNTVEEKIVERAAKKLKLDSLII 755 >gi|148675185|gb|EDL07132.1| mCG19747 [Mus musculus] Length = 1723 Score = 35.8 bits (81), Expect = 3.4, Method: Compositional matrix adjust. Identities = 19/79 (24%), Positives = 39/79 (49%), Gaps = 6/79 (7%) Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 G G+NL +++F S W + Q R + G K+ V +Y L+ + T++E Sbjct: 878 GLGINLASADTVVIFDSDWNPQNDLQAQ------ARAHRIGQKKQVNIYRLVTKGTVEEE 931 Query: 180 VLQRLRTKSTIQDLLLNAL 198 +++R + K + L++ + Sbjct: 932 IIERAKKKMVLDHLVIQRM 950 >gi|114658977|ref|XP_001170676.1| PREDICTED: chromodomain helicase DNA binding protein 2 isoform 4 [Pan troglodytes] gi|114658979|ref|XP_001170719.1| PREDICTED: chromodomain helicase DNA binding protein 2 isoform 6 [Pan troglodytes] gi|114658981|ref|XP_001170756.1| PREDICTED: chromodomain helicase DNA binding protein 2 isoform 8 [Pan troglodytes] Length = 1828 Score = 35.8 bits (81), Expect = 3.4, Method: Compositional matrix adjust. Identities = 19/79 (24%), Positives = 39/79 (49%), Gaps = 6/79 (7%) Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 G G+NL +++F S W + Q R + G K+ V +Y L+ + T++E Sbjct: 871 GLGINLASADTVVIFDSDWNPQNDLQ------AQARAHRIGQKKQVNIYRLVTKGTVEEE 924 Query: 180 VLQRLRTKSTIQDLLLNAL 198 +++R + K + L++ + Sbjct: 925 IIERAKKKMVLDHLVIQRM 943 >gi|73951149|ref|XP_859392.1| PREDICTED: similar to Chromodomain-helicase-DNA-binding protein 2 (CHD-2) isoform 13 [Canis familiaris] Length = 1814 Score = 35.8 bits (81), Expect = 3.4, Method: Compositional matrix adjust. Identities = 19/79 (24%), Positives = 39/79 (49%), Gaps = 6/79 (7%) Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 G G+NL +++F S W + Q R + G K+ V +Y L+ + T++E Sbjct: 856 GLGINLASADTVVIFDSDWNPQNDLQ------AQARAHRIGQKKQVNIYRLVTKGTVEEE 909 Query: 180 VLQRLRTKSTIQDLLLNAL 198 +++R + K + L++ + Sbjct: 910 IIERAKKKMVLDHLVIQRM 928 >gi|118421089|ref|NP_001262.3| chromodomain-helicase-DNA-binding protein 2 isoform 1 [Homo sapiens] gi|119370320|sp|O14647|CHD2_HUMAN RecName: Full=Chromodomain-helicase-DNA-binding protein 2; Short=CHD-2; AltName: Full=ATP-dependent helicase CHD2 gi|225000176|gb|AAI72425.1| Chromodomain helicase DNA binding protein 2 [synthetic construct] Length = 1828 Score = 35.8 bits (81), Expect = 3.5, Method: Compositional matrix adjust. Identities = 19/79 (24%), Positives = 39/79 (49%), Gaps = 6/79 (7%) Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 G G+NL +++F S W + Q R + G K+ V +Y L+ + T++E Sbjct: 871 GLGINLASADTVVIFDSDWNPQNDLQ------AQARAHRIGQKKQVNIYRLVTKGTVEEE 924 Query: 180 VLQRLRTKSTIQDLLLNAL 198 +++R + K + L++ + Sbjct: 925 IIERAKKKMVLDHLVIQRM 943 >gi|189458810|ref|NP_001074814.2| chromodomain helicase DNA binding protein 2 [Mus musculus] Length = 1827 Score = 35.8 bits (81), Expect = 3.5, Method: Compositional matrix adjust. Identities = 19/79 (24%), Positives = 39/79 (49%), Gaps = 6/79 (7%) Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 G G+NL +++F S W + Q R + G K+ V +Y L+ + T++E Sbjct: 871 GLGINLASADTVVIFDSDWNPQNDLQ------AQARAHRIGQKKQVNIYRLVTKGTVEEE 924 Query: 180 VLQRLRTKSTIQDLLLNAL 198 +++R + K + L++ + Sbjct: 925 IIERAKKKMVLDHLVIQRM 943 >gi|124430705|ref|NP_081954.1| zinc finger Ran-binding domain-containing protein 3 [Mus musculus] gi|81885066|sp|Q6NZP1|ZRAB3_MOUSE RecName: Full=Zinc finger Ran-binding domain-containing protein 3 gi|42406402|gb|AAH66035.1| Zinc finger, RAN-binding domain containing 3 [Mus musculus] Length = 1069 Score = 35.8 bits (81), Expect = 3.5, Method: Compositional matrix adjust. Identities = 24/84 (28%), Positives = 40/84 (47%), Gaps = 6/84 (7%) Query: 118 SCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 + G GL ++ VF L+WD +Q +R + G +V ++YLIA T+D Sbjct: 399 AAGQGLTFTAASHV-VFAELYWDPGHIKQAEDRA-----HRIGQCSSVNIHYLIANGTLD 452 Query: 178 ELVLQRLRTKSTIQDLLLNALKKE 201 L+ L K+ + LN K++ Sbjct: 453 SLMWAMLNRKAQVTGSTLNGRKEK 476 >gi|119622565|gb|EAX02160.1| chromodomain helicase DNA binding protein 2, isoform CRA_a [Homo sapiens] gi|119622567|gb|EAX02162.1| chromodomain helicase DNA binding protein 2, isoform CRA_a [Homo sapiens] gi|119622569|gb|EAX02164.1| chromodomain helicase DNA binding protein 2, isoform CRA_a [Homo sapiens] gi|239740390|gb|ACS13730.1| chromodomain-helicase-dna-binding protein 2 [Homo sapiens] Length = 1739 Score = 35.8 bits (81), Expect = 3.5, Method: Compositional matrix adjust. Identities = 19/79 (24%), Positives = 39/79 (49%), Gaps = 6/79 (7%) Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 G G+NL +++F S W + Q R + G K+ V +Y L+ + T++E Sbjct: 871 GLGINLASADTVVIFDSDWNPQNDLQAQ------ARAHRIGQKKQVNIYRLVTKGTVEEE 924 Query: 180 VLQRLRTKSTIQDLLLNAL 198 +++R + K + L++ + Sbjct: 925 IIERAKKKMVLDHLVIQRM 943 >gi|73951145|ref|XP_859323.1| PREDICTED: similar to Chromodomain-helicase-DNA-binding protein 2 (CHD-2) isoform 11 [Canis familiaris] Length = 1820 Score = 35.8 bits (81), Expect = 3.5, Method: Compositional matrix adjust. Identities = 19/79 (24%), Positives = 39/79 (49%), Gaps = 6/79 (7%) Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 G G+NL +++F S W + Q R + G K+ V +Y L+ + T++E Sbjct: 871 GLGINLASADTVVIFDSDWNPQNDLQ------AQARAHRIGQKKQVNIYRLVTKGTVEEE 924 Query: 180 VLQRLRTKSTIQDLLLNAL 198 +++R + K + L++ + Sbjct: 925 IIERAKKKMVLDHLVIQRM 943 >gi|73951153|ref|XP_859466.1| PREDICTED: similar to Chromodomain-helicase-DNA-binding protein 2 (CHD-2) isoform 15 [Canis familiaris] Length = 1812 Score = 35.8 bits (81), Expect = 3.5, Method: Compositional matrix adjust. Identities = 19/79 (24%), Positives = 39/79 (49%), Gaps = 6/79 (7%) Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 G G+NL +++F S W + Q R + G K+ V +Y L+ + T++E Sbjct: 856 GLGINLASADTVVIFDSDWNPQNDLQ------AQARAHRIGQKKQVNIYRLVTKGTVEEE 909 Query: 180 VLQRLRTKSTIQDLLLNAL 198 +++R + K + L++ + Sbjct: 910 IIERAKKKMVLDHLVIQRM 928 >gi|73951125|ref|XP_849509.1| PREDICTED: similar to Chromodomain-helicase-DNA-binding protein 2 (CHD-2) isoform 2 [Canis familiaris] gi|73951131|ref|XP_536179.2| PREDICTED: similar to Chromodomain-helicase-DNA-binding protein 2 (CHD-2) isoform 1 [Canis familiaris] Length = 1827 Score = 35.8 bits (81), Expect = 3.5, Method: Compositional matrix adjust. Identities = 19/79 (24%), Positives = 39/79 (49%), Gaps = 6/79 (7%) Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 G G+NL +++F S W + Q R + G K+ V +Y L+ + T++E Sbjct: 871 GLGINLASADTVVIFDSDWNPQNDLQ------AQARAHRIGQKKQVNIYRLVTKGTVEEE 924 Query: 180 VLQRLRTKSTIQDLLLNAL 198 +++R + K + L++ + Sbjct: 925 IIERAKKKMVLDHLVIQRM 943 >gi|119622570|gb|EAX02165.1| chromodomain helicase DNA binding protein 2, isoform CRA_d [Homo sapiens] Length = 1857 Score = 35.8 bits (81), Expect = 3.5, Method: Compositional matrix adjust. Identities = 19/79 (24%), Positives = 39/79 (49%), Gaps = 6/79 (7%) Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 G G+NL +++F S W + Q R + G K+ V +Y L+ + T++E Sbjct: 835 GLGINLASADTVVIFDSDWNPQNDLQ------AQARAHRIGQKKQVNIYRLVTKGTVEEE 888 Query: 180 VLQRLRTKSTIQDLLLNAL 198 +++R + K + L++ + Sbjct: 889 IIERAKKKMVLDHLVIQRM 907 >gi|4733988|gb|AAD28668.1| putative chromodomain-helicase-DNA-binding protein [Arabidopsis thaliana] Length = 1738 Score = 35.8 bits (81), Expect = 3.5, Method: Compositional matrix adjust. Identities = 20/84 (23%), Positives = 40/84 (47%), Gaps = 6/84 (7%) Query: 118 SCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 + G G+NL +++F S W + Q M +R + G + V +Y + +++ Sbjct: 1031 AGGLGINLATADTVVIFDSDWNPQNDLQAM------SRAHRIGQQEVVNIYRFVTSKSVE 1084 Query: 178 ELVLQRLRTKSTIQDLLLNALKKE 201 E +L+R + K + L++ L E Sbjct: 1085 EEILERAKRKMVLDHLVIQKLNAE 1108 >gi|73951133|ref|XP_859090.1| PREDICTED: similar to Chromodomain-helicase-DNA-binding protein 2 (CHD-2) isoform 5 [Canis familiaris] Length = 1822 Score = 35.8 bits (81), Expect = 3.5, Method: Compositional matrix adjust. Identities = 19/79 (24%), Positives = 39/79 (49%), Gaps = 6/79 (7%) Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 G G+NL +++F S W + Q R + G K+ V +Y L+ + T++E Sbjct: 866 GLGINLASADTVVIFDSDWNPQNDLQ------AQARAHRIGQKKQVNIYRLVTKGTVEEE 919 Query: 180 VLQRLRTKSTIQDLLLNAL 198 +++R + K + L++ + Sbjct: 920 IIERAKKKMVLDHLVIQRM 938 >gi|114658985|ref|XP_510607.2| PREDICTED: chromodomain helicase DNA binding protein 2 isoform 10 [Pan troglodytes] Length = 1739 Score = 35.8 bits (81), Expect = 3.5, Method: Compositional matrix adjust. Identities = 19/79 (24%), Positives = 39/79 (49%), Gaps = 6/79 (7%) Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 G G+NL +++F S W + Q R + G K+ V +Y L+ + T++E Sbjct: 871 GLGINLASADTVVIFDSDWNPQNDLQAQ------ARAHRIGQKKQVNIYRLVTKGTVEEE 924 Query: 180 VLQRLRTKSTIQDLLLNAL 198 +++R + K + L++ + Sbjct: 925 IIERAKKKMVLDHLVIQRM 943 >gi|169763362|ref|XP_001727581.1| SNF2 family helicase/ATPase PasG [Aspergillus oryzae RIB40] gi|83770609|dbj|BAE60742.1| unnamed protein product [Aspergillus oryzae] Length = 868 Score = 35.8 bits (81), Expect = 3.5, Method: Compositional matrix adjust. Identities = 23/79 (29%), Positives = 40/79 (50%), Gaps = 12/79 (15%) Query: 120 GHGLNLQYGGNILVFFSLW---WDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTI 176 G G+NL +++F S W DL + Q RIG T R V VY L + T+ Sbjct: 709 GQGINLMAADTVILFDSDWNPQQDL-QAQDRAHRIGQT--------RPVIVYRLATKGTV 759 Query: 177 DELVLQRLRTKSTIQDLLL 195 ++ +L++ +K ++ L++ Sbjct: 760 EQTLLEKADSKRRLERLVI 778 >gi|260942857|ref|XP_002615727.1| hypothetical protein CLUG_04609 [Clavispora lusitaniae ATCC 42720] gi|238851017|gb|EEQ40481.1| hypothetical protein CLUG_04609 [Clavispora lusitaniae ATCC 42720] Length = 343 Score = 35.8 bits (81), Expect = 3.6, Method: Compositional matrix adjust. Identities = 21/90 (23%), Positives = 45/90 (50%), Gaps = 6/90 (6%) Query: 106 EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 + KIP+ S G G+NL G + ++F+ W+ +Q +R + G R V Sbjct: 144 DPKIPVFILSTRSGGLGINLT-GADTVIFYDSDWNPAMDKQCQDRC-----HRIGQMRDV 197 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 +Y +++ TI+ +L++ K + ++++ Sbjct: 198 HIYRFVSEYTIESNILKKANQKRQLDNVVI 227 >gi|154271652|ref|XP_001536679.1| hypothetical protein HCAG_08461 [Ajellomyces capsulatus NAm1] gi|150409349|gb|EDN04799.1| hypothetical protein HCAG_08461 [Ajellomyces capsulatus NAm1] Length = 889 Score = 35.8 bits (81), Expect = 3.6, Method: Compositional matrix adjust. Identities = 23/88 (26%), Positives = 43/88 (48%), Gaps = 12/88 (13%) Query: 111 LLFAHPASCGHGLNLQYGGNILVFFSLW---WDLEEHQQMIERIGVTRQRQAGFKRAVFV 167 + F + G G+NL +++F S W DL + Q RIG T + V V Sbjct: 713 IFFLSTRAGGQGINLTAADTVILFDSDWNPQQDL-QAQDRAHRIGQT--------KPVIV 763 Query: 168 YYLIAQNTIDELVLQRLRTKSTIQDLLL 195 Y L + T+++ +L++ +K ++ L++ Sbjct: 764 YRLATRGTVEQTLLEKADSKRRLEKLVI 791 >gi|157819999|ref|NP_001100993.1| chromodomain-helicase-DNA-binding protein 2 [Rattus norvegicus] gi|149057183|gb|EDM08506.1| chromodomain helicase DNA binding protein 2 (predicted) [Rattus norvegicus] Length = 1834 Score = 35.8 bits (81), Expect = 3.6, Method: Compositional matrix adjust. Identities = 19/79 (24%), Positives = 39/79 (49%), Gaps = 6/79 (7%) Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 G G+NL +++F S W + Q R + G K+ V +Y L+ + T++E Sbjct: 878 GLGINLASADTVVIFDSDWNPQNDLQ------AQARAHRIGQKKQVNIYRLVTKGTVEEE 931 Query: 180 VLQRLRTKSTIQDLLLNAL 198 +++R + K + L++ + Sbjct: 932 IIERAKKKMVLDHLVIQRM 950 >gi|145359958|ref|NP_178970.3| CHR5 (chromatin remodeling 5); ATP binding / DNA binding / chromatin binding / helicase/ nucleic acid binding [Arabidopsis thaliana] gi|330251136|gb|AEC06230.1| chromatin remodeling 5 [Arabidopsis thaliana] Length = 1724 Score = 35.8 bits (81), Expect = 3.6, Method: Compositional matrix adjust. Identities = 20/84 (23%), Positives = 40/84 (47%), Gaps = 6/84 (7%) Query: 118 SCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 + G G+NL +++F S W + Q M +R + G + V +Y + +++ Sbjct: 1017 AGGLGINLATADTVVIFDSDWNPQNDLQAM------SRAHRIGQQEVVNIYRFVTSKSVE 1070 Query: 178 ELVLQRLRTKSTIQDLLLNALKKE 201 E +L+R + K + L++ L E Sbjct: 1071 EEILERAKRKMVLDHLVIQKLNAE 1094 >gi|114658991|ref|XP_001170635.1| PREDICTED: chromodomain helicase DNA binding protein 2 isoform 2 [Pan troglodytes] gi|114658993|ref|XP_001170689.1| PREDICTED: chromodomain helicase DNA binding protein 2 isoform 5 [Pan troglodytes] Length = 1730 Score = 35.8 bits (81), Expect = 3.6, Method: Compositional matrix adjust. Identities = 19/79 (24%), Positives = 39/79 (49%), Gaps = 6/79 (7%) Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 G G+NL +++F S W + Q R + G K+ V +Y L+ + T++E Sbjct: 773 GLGINLASADTVVIFDSDWNPQNDLQ------AQARAHRIGQKKQVNIYRLVTKGTVEEE 826 Query: 180 VLQRLRTKSTIQDLLLNAL 198 +++R + K + L++ + Sbjct: 827 IIERAKKKMVLDHLVIQRM 845 >gi|2645431|gb|AAB87382.1| CHD2 [Homo sapiens] Length = 1739 Score = 35.8 bits (81), Expect = 3.6, Method: Compositional matrix adjust. Identities = 19/79 (24%), Positives = 39/79 (49%), Gaps = 6/79 (7%) Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 G G+NL +++F S W + Q R + G K+ V +Y L+ + T++E Sbjct: 871 GLGINLASADTVVIFDSDWNPQNDLQAQ------ARAHRIGQKKQVNIYRLVTKGTVEEE 924 Query: 180 VLQRLRTKSTIQDLLLNAL 198 +++R + K + L++ + Sbjct: 925 IIERAKKKMVLDHLVIQRM 943 >gi|307210254|gb|EFN86904.1| Chromodomain-helicase-DNA-binding protein 1 [Harpegnathos saltator] Length = 1825 Score = 35.8 bits (81), Expect = 3.6, Method: Compositional matrix adjust. Identities = 19/79 (24%), Positives = 39/79 (49%), Gaps = 6/79 (7%) Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 G G+NL +++F S W + Q R + G K V +Y L+ +N+++E Sbjct: 837 GLGINLATADTVIIFDSDWNPQNDLQAQ------ARAHRIGQKNQVNIYRLVTKNSVEEE 890 Query: 180 VLQRLRTKSTIQDLLLNAL 198 +++R + K + L++ + Sbjct: 891 IVERAKQKMVLDHLVIQRM 909 >gi|296204004|ref|XP_002806940.1| PREDICTED: LOW QUALITY PROTEIN: chromodomain-helicase-DNA-binding protein 2-like [Callithrix jacchus] Length = 1738 Score = 35.8 bits (81), Expect = 3.6, Method: Compositional matrix adjust. Identities = 19/79 (24%), Positives = 39/79 (49%), Gaps = 6/79 (7%) Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 G G+NL +++F S W + Q R + G K+ V +Y L+ + T++E Sbjct: 856 GLGINLASADTVVIFDSDWNPQNDLQ------AQARAHRIGQKKQVNIYRLVTKGTVEEE 909 Query: 180 VLQRLRTKSTIQDLLLNAL 198 +++R + K + L++ + Sbjct: 910 IIERAKKKMVLDHLVIQRM 928 >gi|158341292|ref|YP_001522344.1| SNF2 family helicase [Acaryochloris marina MBIC11017] gi|158311533|gb|ABW33144.1| helicase, SNF2 family [Acaryochloris marina MBIC11017] Length = 1406 Score = 35.8 bits (81), Expect = 3.6, Method: Compositional matrix adjust. Identities = 22/78 (28%), Positives = 37/78 (47%), Gaps = 6/78 (7%) Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 G GLNL + ++ WW+ +E R + G +R V +Y L+A+ TI+E Sbjct: 1316 GTGLNLT-AADYVIHMDPWWN-----PAVEDQASDRAHRIGQQRPVTIYRLVAKGTIEEK 1369 Query: 180 VLQRLRTKSTIQDLLLNA 197 +++ K + D LL Sbjct: 1370 IVELHNQKRDLADSLLEG 1387 >gi|148707811|gb|EDL39758.1| mCG13937, isoform CRA_b [Mus musculus] Length = 1097 Score = 35.8 bits (81), Expect = 3.6, Method: Compositional matrix adjust. Identities = 24/84 (28%), Positives = 40/84 (47%), Gaps = 6/84 (7%) Query: 118 SCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 + G GL ++ VF L+WD +Q +R + G +V ++YLIA T+D Sbjct: 427 AAGQGLTFTAASHV-VFAELYWDPGHIKQAEDRA-----HRIGQCSSVNIHYLIANGTLD 480 Query: 178 ELVLQRLRTKSTIQDLLLNALKKE 201 L+ L K+ + LN K++ Sbjct: 481 SLMWAMLNRKAQVTGSTLNGRKEK 504 >gi|328786333|ref|XP_001120496.2| PREDICTED: chromodomain-helicase-DNA-binding protein 1 [Apis mellifera] Length = 1667 Score = 35.8 bits (81), Expect = 3.7, Method: Compositional matrix adjust. Identities = 19/79 (24%), Positives = 39/79 (49%), Gaps = 6/79 (7%) Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 G G+NL +++F S W + Q R + G K V +Y L+ +N+++E Sbjct: 738 GLGINLATADTVIIFDSDWNPQNDLQAQ------ARAHRIGQKNQVNIYRLVTKNSVEEE 791 Query: 180 VLQRLRTKSTIQDLLLNAL 198 +++R + K + L++ + Sbjct: 792 IVERAKQKMVLDHLVIQRM 810 >gi|73951143|ref|XP_859285.1| PREDICTED: similar to Chromodomain-helicase-DNA-binding protein 2 (CHD-2) isoform 10 [Canis familiaris] Length = 1806 Score = 35.8 bits (81), Expect = 3.7, Method: Compositional matrix adjust. Identities = 19/79 (24%), Positives = 39/79 (49%), Gaps = 6/79 (7%) Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 G G+NL +++F S W + Q R + G K+ V +Y L+ + T++E Sbjct: 856 GLGINLASADTVVIFDSDWNPQNDLQ------AQARAHRIGQKKQVNIYRLVTKGTVEEE 909 Query: 180 VLQRLRTKSTIQDLLLNAL 198 +++R + K + L++ + Sbjct: 910 IIERAKKKMVLDHLVIQRM 928 >gi|290986627|ref|XP_002676025.1| predicted protein [Naegleria gruberi] gi|284089625|gb|EFC43281.1| predicted protein [Naegleria gruberi] Length = 467 Score = 35.8 bits (81), Expect = 3.7, Method: Compositional matrix adjust. Identities = 30/96 (31%), Positives = 48/96 (50%), Gaps = 13/96 (13%) Query: 109 IPLLFAHPASCGHGLNLQYGGNILVFFSLWWD---LEEHQQMIERIGVTRQRQAGFKRAV 165 + +L + A CG LN + +VF L W+ L + + RIG ++ F V Sbjct: 374 VAILSMNVAGCG--LNF-VPCSTVVFAELCWNPALLNQCEDRCHRIG----QKGAF---V 423 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 + YL+A+ T+D+ + L K+ I DL LN K+E Sbjct: 424 DITYLLAKKTLDDFMWDLLTKKADITDLALNGQKEE 459 >gi|254585925|ref|XP_002498530.1| ZYRO0G12474p [Zygosaccharomyces rouxii] gi|238941424|emb|CAR29597.1| ZYRO0G12474p [Zygosaccharomyces rouxii] Length = 901 Score = 35.8 bits (81), Expect = 3.7, Method: Composition-based stats. Identities = 29/93 (31%), Positives = 42/93 (45%), Gaps = 9/93 (9%) Query: 110 PLLFA---HPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVF 166 P +FA S G GLNL G L+ F W+ Q + RI + G K+ + Sbjct: 669 PSIFAFLLSAKSGGVGLNL-IGACRLILFDNDWNPSVDLQAMSRI-----HRDGQKKPCY 722 Query: 167 VYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 +Y L+ IDE +LQR K+ + L+ K Sbjct: 723 IYRLVTTGCIDEKILQRQLMKNCLSQKFLSDTK 755 >gi|149245518|ref|XP_001527236.1| SNF2-family ATP dependent chromatin remodeling factor snf21 [Lodderomyces elongisporus NRRL YB-4239] gi|146449630|gb|EDK43886.1| SNF2-family ATP dependent chromatin remodeling factor snf21 [Lodderomyces elongisporus NRRL YB-4239] Length = 1400 Score = 35.8 bits (81), Expect = 3.7, Method: Compositional matrix adjust. Identities = 23/82 (28%), Positives = 42/82 (51%), Gaps = 6/82 (7%) Query: 118 SCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 + G GLNLQ +++F + W HQ + + R + G K V + LI+ ++++ Sbjct: 989 AGGLGLNLQTADTVIIFDTDW---NPHQDLQAQ---DRAHRIGQKNEVRILRLISNDSVE 1042 Query: 178 ELVLQRLRTKSTIQDLLLNALK 199 E++L+R K I ++ A K Sbjct: 1043 EMILERAHQKLEIDGKVIQAGK 1064 >gi|109730809|gb|AAI17923.1| Zinc finger, RAN-binding domain containing 3 [Mus musculus] gi|109731403|gb|AAI17922.1| Zranb3 protein [Mus musculus] Length = 1069 Score = 35.8 bits (81), Expect = 3.7, Method: Compositional matrix adjust. Identities = 24/84 (28%), Positives = 40/84 (47%), Gaps = 6/84 (7%) Query: 118 SCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 + G GL ++ VF L+WD +Q +R + G +V ++YLIA T+D Sbjct: 399 AAGQGLTFTAASHV-VFAELYWDPGHIKQAEDRA-----HRIGQCSSVNIHYLIANGTLD 452 Query: 178 ELVLQRLRTKSTIQDLLLNALKKE 201 L+ L K+ + LN K++ Sbjct: 453 SLMWAMLNRKAQVTGSTLNGRKEK 476 >gi|73951129|ref|XP_859020.1| PREDICTED: similar to Chromodomain-helicase-DNA-binding protein 2 (CHD-2) isoform 4 [Canis familiaris] Length = 1714 Score = 35.8 bits (81), Expect = 3.7, Method: Compositional matrix adjust. Identities = 19/79 (24%), Positives = 39/79 (49%), Gaps = 6/79 (7%) Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 G G+NL +++F S W + Q R + G K+ V +Y L+ + T++E Sbjct: 758 GLGINLASADTVVIFDSDWNPQNDLQ------AQARAHRIGQKKQVNIYRLVTKGTVEEE 811 Query: 180 VLQRLRTKSTIQDLLLNAL 198 +++R + K + L++ + Sbjct: 812 IIERAKKKMVLDHLVIQRM 830 >gi|322695761|gb|EFY87564.1| DNA repair and recombination protein RAD5B [Metarhizium acridum CQMa 102] Length = 1030 Score = 35.8 bits (81), Expect = 3.7, Method: Compositional matrix adjust. Identities = 25/97 (25%), Positives = 46/97 (47%), Gaps = 9/97 (9%) Query: 105 NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA 164 N+ + ++ A A C GLNL + ++ WW Q I+R+ + G R Sbjct: 923 NDAETRVMLASLAVCSVGLNL-VSADTVILSDSWWAPAIEDQAIDRV-----HRLGQTRK 976 Query: 165 VFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 V+ LI + +++E VL + K +DL+ A +++ Sbjct: 977 TTVWRLIVEGSVEERVLDIQKEK---RDLVTKAFQEK 1010 >gi|284159900|gb|ADB80440.1| NHX1 [Malus zumi] Length = 544 Score = 35.8 bits (81), Expect = 3.7, Method: Compositional matrix adjust. Identities = 13/35 (37%), Positives = 25/35 (71%) Query: 170 LIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIH 204 L+ Q+++D+LV+Q +R ++I+DLL + T+H Sbjct: 472 LLGQDSVDDLVIQDIRRPASIRDLLTTPFNRHTVH 506 >gi|148707810|gb|EDL39757.1| mCG13937, isoform CRA_a [Mus musculus] Length = 1073 Score = 35.8 bits (81), Expect = 3.8, Method: Compositional matrix adjust. Identities = 24/84 (28%), Positives = 40/84 (47%), Gaps = 6/84 (7%) Query: 118 SCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 + G GL ++ VF L+WD +Q +R + G +V ++YLIA T+D Sbjct: 403 AAGQGLTFTAASHV-VFAELYWDPGHIKQAEDRA-----HRIGQCSSVNIHYLIANGTLD 456 Query: 178 ELVLQRLRTKSTIQDLLLNALKKE 201 L+ L K+ + LN K++ Sbjct: 457 SLMWAMLNRKAQVTGSTLNGRKEK 480 >gi|54309827|ref|YP_130847.1| hypothetical protein PBPRA2667 [Photobacterium profundum SS9] gi|46914265|emb|CAG21045.1| hypothetical protein PBPRA2667 [Photobacterium profundum SS9] Length = 1298 Score = 35.8 bits (81), Expect = 3.8, Method: Compositional matrix adjust. Identities = 43/189 (22%), Positives = 76/189 (40%), Gaps = 21/189 (11%) Query: 9 RELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANA 68 R++ CD + E +SK + LQL A E +H V + + L++ ++ Sbjct: 1112 RQVCCDSRLVFSEMDQPSSKLNEALQLVKEA---REGQHRILVFSQFVTLLKMFADQLEG 1168 Query: 69 APIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYG 128 I +Y +R +K I + GK + + G GLNL Sbjct: 1169 DGINYSYLDGKSSSRQRKQ------------AIDAFTSGKKEVFLISLKAGGTGLNLTEA 1216 Query: 129 GNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKS 188 + + WW+ +E R + G + V VY L+A NTI+E ++ ++K Sbjct: 1217 DTV-IHLDPWWN-----PAVEDQASDRAYRMGQTKPVTVYRLVATNTIEEKIVLLHQSKR 1270 Query: 189 TIQDLLLNA 197 + D +L+ Sbjct: 1271 DLADKVLSG 1279 >gi|301607520|ref|XP_002933353.1| PREDICTED: chromodomain-helicase-DNA-binding protein 2-like [Xenopus (Silurana) tropicalis] Length = 1809 Score = 35.8 bits (81), Expect = 3.8, Method: Compositional matrix adjust. Identities = 19/79 (24%), Positives = 39/79 (49%), Gaps = 6/79 (7%) Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 G G+NL +++F S W + Q R + G K+ V +Y L+ + T++E Sbjct: 873 GLGINLASADTVVIFDSDWNPQNDLQ------AQARAHRIGQKKQVNIYRLVTRGTVEED 926 Query: 180 VLQRLRTKSTIQDLLLNAL 198 +++R + K + L++ + Sbjct: 927 IIERAKKKMVLDHLVIQRM 945 >gi|195576640|ref|XP_002078183.1| GD23310 [Drosophila simulans] gi|194190192|gb|EDX03768.1| GD23310 [Drosophila simulans] Length = 755 Score = 35.8 bits (81), Expect = 3.8, Method: Compositional matrix adjust. Identities = 27/94 (28%), Positives = 43/94 (45%), Gaps = 14/94 (14%) Query: 100 TIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWD---LEEHQQMIERIGVTRQ 156 T Q+ + K+ LL +C G+ L I+VF L W+ L + + RIG T+ Sbjct: 580 TFQKKSSCKVALLSLK--ACNSGITLT-AAEIIVFAELDWNPSTLAQAESRAHRIGQTK- 635 Query: 157 RQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 V YL+A NT D+++ L+ K + Sbjct: 636 -------PVICRYLMAHNTADDIIWNMLKNKQEV 662 >gi|284518926|gb|ADB92598.1| vacuolar Na+/H+ antiporter [Malus x domestica] Length = 544 Score = 35.8 bits (81), Expect = 3.8, Method: Compositional matrix adjust. Identities = 13/35 (37%), Positives = 25/35 (71%) Query: 170 LIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIH 204 L+ Q+++D+LV+Q +R ++I+DLL + T+H Sbjct: 472 LLGQDSVDDLVIQDIRRPASIRDLLTTPFNRHTVH 506 >gi|224062717|ref|XP_002197759.1| PREDICTED: chromodomain helicase DNA binding protein 2 [Taeniopygia guttata] Length = 1826 Score = 35.8 bits (81), Expect = 3.8, Method: Compositional matrix adjust. Identities = 19/79 (24%), Positives = 39/79 (49%), Gaps = 6/79 (7%) Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 G G+NL +++F S W + Q R + G K+ V +Y L+ + T++E Sbjct: 866 GLGINLASADTVVIFDSDWNPQNDLQ------AQARAHRIGQKKQVNIYRLVTKGTVEEE 919 Query: 180 VLQRLRTKSTIQDLLLNAL 198 +++R + K + L++ + Sbjct: 920 IIERAKKKMVLDHLVIQRM 938 >gi|52545910|emb|CAE45796.2| hypothetical protein [Homo sapiens] Length = 192 Score = 35.8 bits (81), Expect = 3.8, Method: Compositional matrix adjust. Identities = 19/48 (39%), Positives = 29/48 (60%), Gaps = 8/48 (16%) Query: 150 RIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 R+G T+Q V VY LI + TI+E +LQR + KS IQ ++++ Sbjct: 6 RLGQTKQ--------VTVYRLICKGTIEERILQRAKEKSEIQRMVISG 45 >gi|238503544|ref|XP_002383005.1| RSC complex subunit (Sth1), putative [Aspergillus flavus NRRL3357] gi|220690476|gb|EED46825.1| RSC complex subunit (Sth1), putative [Aspergillus flavus NRRL3357] Length = 1095 Score = 35.8 bits (81), Expect = 3.9, Method: Compositional matrix adjust. Identities = 24/82 (29%), Positives = 41/82 (50%), Gaps = 6/82 (7%) Query: 118 SCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 + G GLNLQ +++F S W HQ + R + G K V + LI+ N+++ Sbjct: 675 AGGLGLNLQSADTVIIFDSDW---NPHQDL---QAQDRAHRIGQKNEVRILRLISSNSVE 728 Query: 178 ELVLQRLRTKSTIQDLLLNALK 199 E +L+R + K + ++ A K Sbjct: 729 EKILERAQFKLDMDGKVIQAGK 750 >gi|320588259|gb|EFX00734.1| snf2 family helicase [Grosmannia clavigera kw1407] Length = 1741 Score = 35.8 bits (81), Expect = 3.9, Method: Compositional matrix adjust. Identities = 19/80 (23%), Positives = 37/80 (46%), Gaps = 6/80 (7%) Query: 101 IQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 ++ +N G+ + + G GLN+ +++F W + E Q + R + G Sbjct: 1290 VKSFNAGRDEIYLISTTAGGVGLNIHGANRVVIFDFKWNPMHEQQ------AIGRAYRIG 1343 Query: 161 FKRAVFVYYLIAQNTIDELV 180 + VFVY+LI T + ++ Sbjct: 1344 QTKPVFVYWLITGGTFETVL 1363 >gi|255720466|ref|XP_002556513.1| KLTH0H15158p [Lachancea thermotolerans] gi|238942479|emb|CAR30651.1| KLTH0H15158p [Lachancea thermotolerans] Length = 1021 Score = 35.8 bits (81), Expect = 3.9, Method: Compositional matrix adjust. Identities = 26/93 (27%), Positives = 43/93 (46%), Gaps = 7/93 (7%) Query: 103 EWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFK 162 E N K L A G G+NL ++++ S W + Q M R + G K Sbjct: 499 EPNSDKFIFLLTTRAG-GLGINLVTADTVVLYDSDWNPQADLQAM------DRAHRIGQK 551 Query: 163 RAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 + V+VY + +N I+E V++R K + L++ Sbjct: 552 KQVYVYRFVTENAIEEKVIERAAQKLRLDQLVI 584 >gi|158337347|ref|YP_001518522.1| hypothetical protein AM1_4225 [Acaryochloris marina MBIC11017] gi|158307588|gb|ABW29205.1| hypothetical protein AM1_4225 [Acaryochloris marina MBIC11017] Length = 343 Score = 35.8 bits (81), Expect = 3.9, Method: Compositional matrix adjust. Identities = 22/71 (30%), Positives = 37/71 (52%), Gaps = 10/71 (14%) Query: 138 WWDLEEHQQ----MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDL 193 WW E+ QQ +I+R+G+TR R F R +++Y L+ + D+ L + ++DL Sbjct: 12 WWSPEQQQQTVEKLIQRVGLTRVRAESFVR-LWIYALVQEQLADQPCL-----RPPLKDL 65 Query: 194 LLNALKKETIH 204 +L K H Sbjct: 66 VLPTQKVICTH 76 >gi|73952004|ref|XP_856319.1| PREDICTED: similar to chromodomain helicase DNA binding protein 1 isoform 6 [Canis familiaris] Length = 1573 Score = 35.8 bits (81), Expect = 3.9, Method: Compositional matrix adjust. Identities = 19/79 (24%), Positives = 39/79 (49%), Gaps = 6/79 (7%) Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 G G+NL +++F S W + Q R + G K+ V +Y L+ + +++E Sbjct: 867 GLGINLASADTVVIFDSDWNPQNDLQ------AQARAHRIGQKKQVNIYRLVTKGSVEED 920 Query: 180 VLQRLRTKSTIQDLLLNAL 198 +L+R + K + L++ + Sbjct: 921 ILERAKKKMVLDHLVIQRM 939 >gi|241250526|ref|XP_002403274.1| chromodomain helicase DNA binding protein, putative [Ixodes scapularis] gi|215496466|gb|EEC06106.1| chromodomain helicase DNA binding protein, putative [Ixodes scapularis] Length = 1514 Score = 35.8 bits (81), Expect = 3.9, Method: Compositional matrix adjust. Identities = 19/79 (24%), Positives = 39/79 (49%), Gaps = 6/79 (7%) Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 G G+NL +++F S W + Q R + G K V +Y L+ +N+++E Sbjct: 860 GLGINLATADTVVIFDSDWNPQNDLQAQ------ARAHRIGQKNQVNIYRLVTKNSVEED 913 Query: 180 VLQRLRTKSTIQDLLLNAL 198 +++R + K + L++ + Sbjct: 914 IIERAKRKMVLDHLVIQRM 932 >gi|73952006|ref|XP_546008.2| PREDICTED: similar to chromodomain helicase DNA binding protein 1 isoform 1 [Canis familiaris] Length = 1799 Score = 35.8 bits (81), Expect = 3.9, Method: Compositional matrix adjust. Identities = 19/79 (24%), Positives = 39/79 (49%), Gaps = 6/79 (7%) Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 G G+NL +++F S W + Q R + G K+ V +Y L+ + +++E Sbjct: 867 GLGINLASADTVVIFDSDWNPQNDLQ------AQARAHRIGQKKQVNIYRLVTKGSVEED 920 Query: 180 VLQRLRTKSTIQDLLLNAL 198 +L+R + K + L++ + Sbjct: 921 ILERAKKKMVLDHLVIQRM 939 >gi|255077555|ref|XP_002502414.1| SNF2 super family [Micromonas sp. RCC299] gi|226517679|gb|ACO63672.1| SNF2 super family [Micromonas sp. RCC299] Length = 1050 Score = 35.8 bits (81), Expect = 4.0, Method: Composition-based stats. Identities = 24/81 (29%), Positives = 40/81 (49%), Gaps = 6/81 (7%) Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 G GLN+ +++F W ++ Q R + G +R V VY L+A TI+E+ Sbjct: 695 GVGLNITSANRVVIFDPNWNPAKDAQAQ------DRAYRIGQRRDVDVYRLLAAGTIEEM 748 Query: 180 VLQRLRTKSTIQDLLLNALKK 200 V QR K ++ ++A K+ Sbjct: 749 VYQRQVYKQQQSNVAVDASKE 769 >gi|134080265|emb|CAK97168.1| unnamed protein product [Aspergillus niger] Length = 2138 Score = 35.8 bits (81), Expect = 4.0, Method: Compositional matrix adjust. Identities = 28/75 (37%), Positives = 41/75 (54%), Gaps = 10/75 (13%) Query: 122 GLNLQYGGNILVFFSLW-----WDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTI 176 GLNLQ N ++F S +D E MI+ IG R R+ G R V VY+L+A+++I Sbjct: 2040 GLNLQ-SANHVIFLSPMNAETQYDYE--SAMIQAIG--RSRRYGQTRRVHVYHLLAKHSI 2094 Query: 177 DELVLQRLRTKSTIQ 191 D + Q R + I+ Sbjct: 2095 DVNIFQERRHQVLIE 2109 >gi|300796537|ref|NP_001178977.1| chromodomain-helicase-DNA-binding protein 1 [Bos taurus] Length = 1810 Score = 35.8 bits (81), Expect = 4.0, Method: Compositional matrix adjust. Identities = 19/79 (24%), Positives = 39/79 (49%), Gaps = 6/79 (7%) Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 G G+NL +++F S W + Q R + G K+ V +Y L+ + +++E Sbjct: 880 GLGINLASADTVVIFDSDWNPQNDLQ------AQARAHRIGQKKQVNIYRLVTKGSVEED 933 Query: 180 VLQRLRTKSTIQDLLLNAL 198 +L+R + K + L++ + Sbjct: 934 ILERAKKKMVLDHLVIQRM 952 >gi|297477562|ref|XP_002689460.1| PREDICTED: chromodomain helicase DNA binding protein 1-like [Bos taurus] gi|296485027|gb|DAA27142.1| chromodomain helicase DNA binding protein 1-like [Bos taurus] Length = 1810 Score = 35.8 bits (81), Expect = 4.0, Method: Compositional matrix adjust. Identities = 19/79 (24%), Positives = 39/79 (49%), Gaps = 6/79 (7%) Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 G G+NL +++F S W + Q R + G K+ V +Y L+ + +++E Sbjct: 880 GLGINLASADTVVIFDSDWNPQNDLQ------AQARAHRIGQKKQVNIYRLVTKGSVEED 933 Query: 180 VLQRLRTKSTIQDLLLNAL 198 +L+R + K + L++ + Sbjct: 934 ILERAKKKMVLDHLVIQRM 952 >gi|327263233|ref|XP_003216425.1| PREDICTED: chromodomain-helicase-DNA-binding protein 1-like [Anolis carolinensis] Length = 1803 Score = 35.8 bits (81), Expect = 4.1, Method: Compositional matrix adjust. Identities = 19/79 (24%), Positives = 39/79 (49%), Gaps = 6/79 (7%) Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 G G+NL +++F S W + Q R + G K+ V +Y L+ + +++E Sbjct: 868 GLGINLASADTVVIFDSDWNPQNDLQ------AQARAHRIGQKKQVNIYRLVTKGSVEED 921 Query: 180 VLQRLRTKSTIQDLLLNAL 198 +L+R + K + L++ + Sbjct: 922 ILERAKKKMVLDHLVIQRM 940 >gi|222630170|gb|EEE62302.1| hypothetical protein OsJ_17090 [Oryza sativa Japonica Group] Length = 1087 Score = 35.8 bits (81), Expect = 4.1, Method: Compositional matrix adjust. Identities = 25/87 (28%), Positives = 42/87 (48%), Gaps = 6/87 (6%) Query: 111 LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYL 170 L + G GLNLQ +++F S W + QM ++ R + G K V V+ L Sbjct: 777 LFLLSTRAGGLGLNLQTADTVIIFDSDW-----NPQM-DQQAEDRAHRIGQKNEVRVFVL 830 Query: 171 IAQNTIDELVLQRLRTKSTIQDLLLNA 197 ++ +I+E +L R + K I ++ A Sbjct: 831 VSVGSIEEEILDRAKQKMGIDAKVIQA 857 >gi|67523645|ref|XP_659882.1| hypothetical protein AN2278.2 [Aspergillus nidulans FGSC A4] gi|40745233|gb|EAA64389.1| hypothetical protein AN2278.2 [Aspergillus nidulans FGSC A4] gi|259487671|tpe|CBF86520.1| TPA: catalytic subunit of the SWI/SNF chromatin remodeling complex (Eurofung) [Aspergillus nidulans FGSC A4] Length = 1407 Score = 35.4 bits (80), Expect = 4.1, Method: Compositional matrix adjust. Identities = 24/82 (29%), Positives = 41/82 (50%), Gaps = 6/82 (7%) Query: 118 SCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 + G GLNLQ +++F S W HQ + + R + G K V + LI N+++ Sbjct: 934 AGGLGLNLQTADTVIIFDSDW---NPHQDLQAQ---DRAHRIGQKNEVRILRLITSNSVE 987 Query: 178 ELVLQRLRTKSTIQDLLLNALK 199 E +L+R + K + ++ A K Sbjct: 988 EKILERAQFKLDMDGKVIQAGK 1009 >gi|224001656|ref|XP_002290500.1| predicted protein [Thalassiosira pseudonana CCMP1335] gi|220973922|gb|EED92252.1| predicted protein [Thalassiosira pseudonana CCMP1335] Length = 1653 Score = 35.4 bits (80), Expect = 4.2, Method: Compositional matrix adjust. Identities = 22/82 (26%), Positives = 41/82 (50%), Gaps = 6/82 (7%) Query: 118 SCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 + G GLNL +++F S W M++ R + G ++ V V+ +I Q+ ++ Sbjct: 1160 AGGLGLNLATADTVIIFDSDW------NPMMDLQAQDRAHRIGQRKDVRVFRIITQSPVE 1213 Query: 178 ELVLQRLRTKSTIQDLLLNALK 199 E +L R K + +L++ A K Sbjct: 1214 EKILSRATEKLHMNELVVEAGK 1235 >gi|294655844|ref|XP_002770188.1| DEHA2C08294p [Debaryomyces hansenii CBS767] gi|199430649|emb|CAG86104.4| DEHA2C08294p [Debaryomyces hansenii] Length = 1034 Score = 35.4 bits (80), Expect = 4.2, Method: Compositional matrix adjust. Identities = 30/99 (30%), Positives = 47/99 (47%), Gaps = 12/99 (12%) Query: 101 IQEWNE-GKIPLLFAHPASCGH-GLNLQYGGNILVFFSLWWDLEEHQQM--IERIGVTRQ 156 I E+NE G +F G G+NL +++F S W + Q M RIG T+Q Sbjct: 521 IDEYNEPGSSKFVFLLTTRAGGLGINLTTADIVILFDSDWNPQADLQAMDRAHRIGQTKQ 580 Query: 157 RQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 V V+ +++N I+E VL+R K + L++ Sbjct: 581 --------VRVFRFVSENAIEEKVLERATQKLRLDQLVI 611 >gi|70953048|ref|XP_745650.1| hypothetical protein [Plasmodium chabaudi chabaudi] gi|56526041|emb|CAH75841.1| conserved hypothetical protein [Plasmodium chabaudi chabaudi] Length = 1029 Score = 35.4 bits (80), Expect = 4.2, Method: Compositional matrix adjust. Identities = 25/88 (28%), Positives = 43/88 (48%), Gaps = 7/88 (7%) Query: 101 IQEWNEGKIPLLFAHPASCGH-GLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQA 159 I+E++E +F G GLNL N ++ W+ +Q +R+ + Sbjct: 895 IKEFSENDNVFIFLLSTKAGGVGLNL-IAANHVILMDQDWNPHNDRQAEDRV-----HRL 948 Query: 160 GFKRAVFVYYLIAQNTIDELVLQRLRTK 187 G K+ V++Y L +NTI+E VL+ + K Sbjct: 949 GQKKEVYIYRLCCKNTIEETVLKCCKAK 976 >gi|328867898|gb|EGG16279.1| SNF2-related domain-containing protein [Dictyostelium fasciculatum] Length = 1282 Score = 35.4 bits (80), Expect = 4.2, Method: Composition-based stats. Identities = 31/104 (29%), Positives = 48/104 (46%), Gaps = 18/104 (17%) Query: 101 IQEWNEGKIP----LLFAHPASCGHGLNLQYGGNILVFFSLW---WDLEEHQQMIERIGV 153 + EWN P +L H G G+NLQ +++F S W DL+ Q R+G Sbjct: 706 VVEWNRKDSPFFIFVLSTHAG--GLGMNLQTADTVIIFDSDWNPQMDLQA-QDRCHRVGQ 762 Query: 154 TRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + V V+ LI+ N+I+E +L+R K I ++ A Sbjct: 763 VNR--------VNVFRLISANSIEEKILERATDKLEIDAKIIQA 798 >gi|212640482|ref|YP_002317002.1| SWF/SNF family helicase [Anoxybacillus flavithermus WK1] gi|212561962|gb|ACJ35017.1| SWF/SNF family helicase [Anoxybacillus flavithermus WK1] Length = 898 Score = 35.4 bits (80), Expect = 4.2, Method: Compositional matrix adjust. Identities = 42/183 (22%), Positives = 72/183 (39%), Gaps = 29/183 (15%) Query: 34 QLANGAVYYDEEKHWKEVHDEKIKA------LEVIIEKANAAPIIVAY------------ 75 QL N Y +EKH K++ + K +E I E + I Y Sbjct: 707 QLCNHPALYLKEKHPKQIVERSHKVEKLLELVEQIRENGESCLIFTQYIQMGEMIQHLLS 766 Query: 76 -HFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVF 134 H + L + P+ +T D+ I+++ G+ + + G GLNL N ++ Sbjct: 767 THLKETVVFLNGSTPK-QTRDE---MIEQFQNGQFHIFILSLKAGGTGLNLTA-ANHVIH 821 Query: 135 FSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 F WW+ +E R + G + V V+ I TI+E + L K + + L Sbjct: 822 FDRWWN-----PAVENQATDRAYRIGQTKFVHVHKFITTGTIEEKIDDMLEKKQALNEQL 876 Query: 195 LNA 197 + + Sbjct: 877 IQS 879 >gi|94733808|emb|CAK04334.1| novel protein similar to human chromodomain helicase DNA binding protein 2 (CHD2) [Danio rerio] Length = 1694 Score = 35.4 bits (80), Expect = 4.2, Method: Compositional matrix adjust. Identities = 19/79 (24%), Positives = 39/79 (49%), Gaps = 6/79 (7%) Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 G G+NL +++F S W + Q R + G K+ V +Y L+ + T++E Sbjct: 866 GLGINLASADTVVIFDSDWNPQNDLQAQ------ARAHRIGQKKQVNIYRLVTKGTVEED 919 Query: 180 VLQRLRTKSTIQDLLLNAL 198 +++R + K + L++ + Sbjct: 920 IIERAKKKMVLDHLVIQRM 938 >gi|50290467|ref|XP_447665.1| hypothetical protein [Candida glabrata CBS 138] gi|49526975|emb|CAG60602.1| unnamed protein product [Candida glabrata] Length = 1039 Score = 35.4 bits (80), Expect = 4.2, Method: Compositional matrix adjust. Identities = 23/78 (29%), Positives = 38/78 (48%), Gaps = 6/78 (7%) Query: 118 SCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 + G G+NL +++F S W + Q M R + G K+ V VY + +N I+ Sbjct: 517 AGGLGINLVTADTVVLFDSDWNPQADLQAM------DRAHRIGQKKQVHVYRFVTENAIE 570 Query: 178 ELVLQRLRTKSTIQDLLL 195 E VL+R K + L++ Sbjct: 571 EKVLERAAQKLRLDQLVI 588 >gi|238489253|ref|XP_002375864.1| SNF2 family helicase/ATPase PasG, putative [Aspergillus flavus NRRL3357] gi|220698252|gb|EED54592.1| SNF2 family helicase/ATPase PasG, putative [Aspergillus flavus NRRL3357] Length = 819 Score = 35.4 bits (80), Expect = 4.3, Method: Compositional matrix adjust. Identities = 23/79 (29%), Positives = 40/79 (50%), Gaps = 12/79 (15%) Query: 120 GHGLNLQYGGNILVFFSLW---WDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTI 176 G G+NL +++F S W DL + Q RIG T R V VY L + T+ Sbjct: 660 GQGINLMAADTVILFDSDWNPQQDL-QAQDRAHRIGQT--------RPVIVYRLATKGTV 710 Query: 177 DELVLQRLRTKSTIQDLLL 195 ++ +L++ +K ++ L++ Sbjct: 711 EQTLLEKADSKRRLERLVI 729 >gi|26351357|dbj|BAC39315.1| unnamed protein product [Mus musculus] Length = 616 Score = 35.4 bits (80), Expect = 4.3, Method: Compositional matrix adjust. Identities = 24/84 (28%), Positives = 40/84 (47%), Gaps = 6/84 (7%) Query: 118 SCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 + G GL ++ VF L+WD +Q +R + G +V ++YLIA T+D Sbjct: 399 AAGQGLTFTAASHV-VFAELYWDPGHIKQAEDR-----AHRIGQCSSVNIHYLIANGTLD 452 Query: 178 ELVLQRLRTKSTIQDLLLNALKKE 201 L+ L K+ + LN K++ Sbjct: 453 SLMWAMLNRKAQVTGSTLNGRKEK 476 >gi|118343653|ref|NP_001071647.1| chromo-helicase DNA-binding protein [Taeniopygia guttata] gi|28975395|gb|AAO61783.1| chromo-helicase DNA-binding protein [Taeniopygia guttata] Length = 1806 Score = 35.4 bits (80), Expect = 4.3, Method: Compositional matrix adjust. Identities = 19/79 (24%), Positives = 39/79 (49%), Gaps = 6/79 (7%) Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 G G+NL +++F S W + Q R + G K+ V +Y L+ + +++E Sbjct: 869 GLGINLASADTVVIFDSDWNPQNDLQ------AQARAHRIGQKKQVNIYRLVTKGSVEED 922 Query: 180 VLQRLRTKSTIQDLLLNAL 198 +L+R + K + L++ + Sbjct: 923 ILERAKKKMVLDHLVIQRM 941 >gi|320586275|gb|EFW98954.1| rsc complex subunit [Grosmannia clavigera kw1407] Length = 1493 Score = 35.4 bits (80), Expect = 4.3, Method: Compositional matrix adjust. Identities = 25/89 (28%), Positives = 42/89 (47%), Gaps = 8/89 (8%) Query: 101 IQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQ 158 ++E+N P + + G GLNLQ ++++ S W HQ + + R + Sbjct: 964 LREFNAPNSPYFMFLLSTRAGGLGLNLQTADTVIIYDSDW---NPHQDLQAQ---DRAHR 1017 Query: 159 AGFKRAVFVYYLIAQNTIDELVLQRLRTK 187 G K V + LI +I+E +L+R R K Sbjct: 1018 IGQKNEVRILRLITSTSIEEKILERARYK 1046 >gi|157818785|ref|NP_001100935.1| chromodomain helicase DNA binding protein 1 [Rattus norvegicus] gi|149047090|gb|EDL99810.1| chromodomain helicase DNA binding protein 1 (predicted) [Rattus norvegicus] Length = 1711 Score = 35.4 bits (80), Expect = 4.3, Method: Compositional matrix adjust. Identities = 19/79 (24%), Positives = 39/79 (49%), Gaps = 6/79 (7%) Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 G G+NL +++F S W + Q R + G K+ V +Y L+ + +++E Sbjct: 866 GLGINLASADTVVIFDSDWNPQNDLQ------AQARAHRIGQKKQVNIYRLVTKGSVEED 919 Query: 180 VLQRLRTKSTIQDLLLNAL 198 +L+R + K + L++ + Sbjct: 920 ILERAKKKMVLDHLVIQRM 938 >gi|125550816|gb|EAY96525.1| hypothetical protein OsI_18430 [Oryza sativa Indica Group] Length = 1088 Score = 35.4 bits (80), Expect = 4.4, Method: Compositional matrix adjust. Identities = 25/87 (28%), Positives = 42/87 (48%), Gaps = 6/87 (6%) Query: 111 LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYL 170 L + G GLNLQ +++F S W + QM ++ R + G K V V+ L Sbjct: 778 LFLLSTRAGGLGLNLQTADTVIIFDSDW-----NPQM-DQQAEDRAHRIGQKNEVRVFVL 831 Query: 171 IAQNTIDELVLQRLRTKSTIQDLLLNA 197 ++ +I+E +L R + K I ++ A Sbjct: 832 VSVGSIEEEILDRAKQKMGIDAKVIQA 858 >gi|170727301|ref|YP_001761327.1| helicase domain-containing protein [Shewanella woodyi ATCC 51908] gi|169812648|gb|ACA87232.1| helicase domain protein [Shewanella woodyi ATCC 51908] Length = 937 Score = 35.4 bits (80), Expect = 4.4, Method: Compositional matrix adjust. Identities = 21/78 (26%), Positives = 47/78 (60%), Gaps = 7/78 (8%) Query: 118 SCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 + G G+NLQ +I++ + L W+ ++++R+G R + G + V V+ + + +++D Sbjct: 589 AGGEGINLQEHCHIMINYDLPWN---PMRLVQRVG--RLYRYGQLKRVVVFNINSSDSLD 643 Query: 178 ELVLQRL--RTKSTIQDL 193 E VL+ + R ++ ++DL Sbjct: 644 EKVLETMYGRVEAVVKDL 661 >gi|73952000|ref|XP_856236.1| PREDICTED: similar to chromodomain helicase DNA binding protein 1 isoform 4 [Canis familiaris] Length = 1701 Score = 35.4 bits (80), Expect = 4.4, Method: Compositional matrix adjust. Identities = 19/79 (24%), Positives = 39/79 (49%), Gaps = 6/79 (7%) Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 G G+NL +++F S W + Q R + G K+ V +Y L+ + +++E Sbjct: 857 GLGINLASADTVVIFDSDWNPQNDLQ------AQARAHRIGQKKQVNIYRLVTKGSVEED 910 Query: 180 VLQRLRTKSTIQDLLLNAL 198 +L+R + K + L++ + Sbjct: 911 ILERAKKKMVLDHLVIQRM 929 >gi|281344850|gb|EFB20434.1| hypothetical protein PANDA_017908 [Ailuropoda melanoleuca] Length = 1133 Score = 35.4 bits (80), Expect = 4.4, Method: Compositional matrix adjust. Identities = 19/79 (24%), Positives = 39/79 (49%), Gaps = 6/79 (7%) Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 G G+NL +++F S W + Q R + G K+ V +Y L+ + T++E Sbjct: 851 GLGINLASADTVVIFDSDWNPQNDLQ------AQARAHRIGQKKQVNIYRLVTKGTVEEE 904 Query: 180 VLQRLRTKSTIQDLLLNAL 198 +++R + K + L++ + Sbjct: 905 IIERAKKKMVLDHLVIQRM 923 >gi|213410130|ref|XP_002175835.1| SNF2 family ATP-dependent chromatin-remodeling factor snf21 [Schizosaccharomyces japonicus yFS275] gi|212003882|gb|EEB09542.1| SNF2 family ATP-dependent chromatin-remodeling factor snf21 [Schizosaccharomyces japonicus yFS275] Length = 1162 Score = 35.4 bits (80), Expect = 4.4, Method: Compositional matrix adjust. Identities = 31/102 (30%), Positives = 47/102 (46%), Gaps = 23/102 (22%) Query: 112 LFAHPASC-----------GHGLNLQYGGNILVFFSLW---WDLEEHQQMIERIGVTRQR 157 LF PAS G GLNLQ +++F S W DL+ Q RIG T++ Sbjct: 710 LFNDPASIYTIFLLSTRAGGLGLNLQTADTVIIFDSDWNPHQDLQA-QDRAHRIGQTKE- 767 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 V ++ LI + +++E +L R + K I ++ A K Sbjct: 768 -------VRIFRLITEKSVEENILARAQYKLDIDGKVIQAGK 802 >gi|224089288|ref|XP_002186536.1| PREDICTED: hypothetical protein [Taeniopygia guttata] Length = 1650 Score = 35.4 bits (80), Expect = 4.5, Method: Compositional matrix adjust. Identities = 19/79 (24%), Positives = 39/79 (49%), Gaps = 6/79 (7%) Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 G G+NL +++F S W + Q R + G K+ V +Y L+ + +++E Sbjct: 712 GLGINLASADTVVIFDSDWNPQNDLQ------AQARAHRIGQKKQVNIYRLVTKGSVEED 765 Query: 180 VLQRLRTKSTIQDLLLNAL 198 +L+R + K + L++ + Sbjct: 766 ILERAKKKMVLDHLVIQRM 784 >gi|149636559|ref|XP_001513135.1| PREDICTED: similar to Chromodomain helicase DNA binding protein 1 [Ornithorhynchus anatinus] Length = 1807 Score = 35.4 bits (80), Expect = 4.5, Method: Compositional matrix adjust. Identities = 19/79 (24%), Positives = 39/79 (49%), Gaps = 6/79 (7%) Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 G G+NL +++F S W + Q R + G K+ V +Y L+ + +++E Sbjct: 869 GLGINLASADTVVIFDSDWNPQNDLQ------AQARAHRIGQKKQVNIYRLVTKGSVEED 922 Query: 180 VLQRLRTKSTIQDLLLNAL 198 +L+R + K + L++ + Sbjct: 923 ILERAKKKMVLDHLVIQRM 941 >gi|149058725|gb|EDM09882.1| rCG46237 [Rattus norvegicus] Length = 716 Score = 35.4 bits (80), Expect = 4.5, Method: Compositional matrix adjust. Identities = 24/84 (28%), Positives = 40/84 (47%), Gaps = 6/84 (7%) Query: 118 SCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 + G GL ++ VF L+WD +Q +R + G +V ++YLIA T+D Sbjct: 399 AAGQGLTFTAASHV-VFAELFWDPGHIKQAEDRA-----HRIGQCSSVNIHYLIANGTLD 452 Query: 178 ELVLQRLRTKSTIQDLLLNALKKE 201 L+ L K+ + LN K++ Sbjct: 453 SLMWAMLNRKAQVTGSTLNGRKEK 476 >gi|73952002|ref|XP_856275.1| PREDICTED: similar to chromodomain helicase DNA binding protein 1 isoform 5 [Canis familiaris] Length = 1702 Score = 35.4 bits (80), Expect = 4.5, Method: Compositional matrix adjust. Identities = 19/79 (24%), Positives = 39/79 (49%), Gaps = 6/79 (7%) Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 G G+NL +++F S W + Q R + G K+ V +Y L+ + +++E Sbjct: 858 GLGINLASADTVVIFDSDWNPQNDLQ------AQARAHRIGQKKQVNIYRLVTKGSVEED 911 Query: 180 VLQRLRTKSTIQDLLLNAL 198 +L+R + K + L++ + Sbjct: 912 ILERAKKKMVLDHLVIQRM 930 >gi|293352708|ref|XP_002728046.1| PREDICTED: zinc finger, RAN-binding domain containing 3 [Rattus norvegicus] Length = 1069 Score = 35.4 bits (80), Expect = 4.5, Method: Compositional matrix adjust. Identities = 24/84 (28%), Positives = 40/84 (47%), Gaps = 6/84 (7%) Query: 118 SCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 + G GL ++ VF L+WD +Q +R + G +V ++YLIA T+D Sbjct: 399 AAGQGLTFTAASHV-VFAELFWDPGHIKQAEDRA-----HRIGQCSSVNIHYLIANGTLD 452 Query: 178 ELVLQRLRTKSTIQDLLLNALKKE 201 L+ L K+ + LN K++ Sbjct: 453 SLMWAMLNRKAQVTGSTLNGRKEK 476 >gi|317145894|ref|XP_003189752.1| hypothetical protein AOR_1_1066144 [Aspergillus oryzae RIB40] Length = 181 Score = 35.4 bits (80), Expect = 4.6, Method: Compositional matrix adjust. Identities = 23/79 (29%), Positives = 42/79 (53%), Gaps = 9/79 (11%) Query: 110 PLLFAHPASCG-HGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVY 168 PLL A CG G+NLQ G++++ +WW++ ER R + G + V VY Sbjct: 84 PLLVT--AGCGGTGINLQ-SGSVIIQMEVWWNMNH-----ERQAYARCLRQGQDKMVKVY 135 Query: 169 YLIAQNTIDELVLQRLRTK 187 L A+N+ ++++ + + + Sbjct: 136 KLFAENSNIDIMISKCQVR 154 >gi|301785221|ref|XP_002928025.1| PREDICTED: chromodomain-helicase-DNA-binding protein 2-like, partial [Ailuropoda melanoleuca] Length = 1114 Score = 35.4 bits (80), Expect = 4.6, Method: Compositional matrix adjust. Identities = 19/79 (24%), Positives = 39/79 (49%), Gaps = 6/79 (7%) Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 G G+NL +++F S W + Q R + G K+ V +Y L+ + T++E Sbjct: 858 GLGINLASADTVVIFDSDWNPQNDLQ------AQARAHRIGQKKQVNIYRLVTKGTVEEE 911 Query: 180 VLQRLRTKSTIQDLLLNAL 198 +++R + K + L++ + Sbjct: 912 IIERAKKKMVLDHLVIQRM 930 >gi|301768523|ref|XP_002919680.1| PREDICTED: chromodomain-helicase-DNA-binding protein 1-like [Ailuropoda melanoleuca] Length = 1742 Score = 35.4 bits (80), Expect = 4.6, Method: Compositional matrix adjust. Identities = 19/79 (24%), Positives = 39/79 (49%), Gaps = 6/79 (7%) Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 G G+NL +++F S W + Q R + G K+ V +Y L+ + +++E Sbjct: 898 GLGINLASADTVVIFDSDWNPQNDLQ------AQARAHRIGQKKQVNIYRLVTKGSVEED 951 Query: 180 VLQRLRTKSTIQDLLLNAL 198 +L+R + K + L++ + Sbjct: 952 ILERAKKKMVLDHLVIQRM 970 >gi|109658944|gb|AAI17135.1| Chromodomain helicase DNA binding protein 1 [Homo sapiens] Length = 1709 Score = 35.4 bits (80), Expect = 4.6, Method: Compositional matrix adjust. Identities = 19/79 (24%), Positives = 39/79 (49%), Gaps = 6/79 (7%) Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 G G+NL +++F S W + Q R + G K+ V +Y L+ + +++E Sbjct: 868 GLGINLASADTVVIFDSDWNPQNDLQ------AQARAHRIGQKKQVNIYRLVTKGSVEED 921 Query: 180 VLQRLRTKSTIQDLLLNAL 198 +L+R + K + L++ + Sbjct: 922 ILERAKKKMVLDHLVIQRM 940 >gi|68299795|ref|NP_001261.2| chromodomain-helicase-DNA-binding protein 1 [Homo sapiens] gi|269849549|sp|O14646|CHD1_HUMAN RecName: Full=Chromodomain-helicase-DNA-binding protein 1; Short=CHD-1; AltName: Full=ATP-dependent helicase CHD1 gi|119616504|gb|EAW96098.1| chromodomain helicase DNA binding protein 1 [Homo sapiens] Length = 1710 Score = 35.4 bits (80), Expect = 4.6, Method: Compositional matrix adjust. Identities = 19/79 (24%), Positives = 39/79 (49%), Gaps = 6/79 (7%) Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 G G+NL +++F S W + Q R + G K+ V +Y L+ + +++E Sbjct: 868 GLGINLASADTVVIFDSDWNPQNDLQ------AQARAHRIGQKKQVNIYRLVTKGSVEED 921 Query: 180 VLQRLRTKSTIQDLLLNAL 198 +L+R + K + L++ + Sbjct: 922 ILERAKKKMVLDHLVIQRM 940 >gi|73951996|ref|XP_848459.1| PREDICTED: similar to chromodomain helicase DNA binding protein 1 isoform 2 [Canis familiaris] Length = 1711 Score = 35.4 bits (80), Expect = 4.6, Method: Compositional matrix adjust. Identities = 19/79 (24%), Positives = 39/79 (49%), Gaps = 6/79 (7%) Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 G G+NL +++F S W + Q R + G K+ V +Y L+ + +++E Sbjct: 867 GLGINLASADTVVIFDSDWNPQNDLQ------AQARAHRIGQKKQVNIYRLVTKGSVEED 920 Query: 180 VLQRLRTKSTIQDLLLNAL 198 +L+R + K + L++ + Sbjct: 921 ILERAKKKMVLDHLVIQRM 939 >gi|326332827|ref|ZP_08199085.1| ATP-dependent RNA helicase [Nocardioidaceae bacterium Broad-1] gi|325949385|gb|EGD41467.1| ATP-dependent RNA helicase [Nocardioidaceae bacterium Broad-1] Length = 735 Score = 35.4 bits (80), Expect = 4.6, Method: Composition-based stats. Identities = 25/97 (25%), Positives = 45/97 (46%), Gaps = 6/97 (6%) Query: 105 NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA 164 N+ ++ ++ + G G+NLQ N LV L W E Q I+R+ + G Sbjct: 612 NDPEVEIIVCSLTAAGVGVNLQAASN-LVLAELSWTDAEQTQAIDRV-----HRIGQTEP 665 Query: 165 VFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 V + +IA TID + + + +K+ + L+ +E Sbjct: 666 VTAWRIIASQTIDTRIAELIDSKAGLAARALDGSDEE 702 >gi|317033838|ref|XP_001395547.2| C-5 cytosine-specific DNA methylase [Aspergillus niger CBS 513.88] Length = 2044 Score = 35.4 bits (80), Expect = 4.6, Method: Compositional matrix adjust. Identities = 28/75 (37%), Positives = 41/75 (54%), Gaps = 10/75 (13%) Query: 122 GLNLQYGGNILVFFSLW-----WDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTI 176 GLNLQ N ++F S +D E MI+ IG R R+ G R V VY+L+A+++I Sbjct: 1943 GLNLQ-SANHVIFLSPMNAETQYDYE--SAMIQAIG--RSRRYGQTRRVHVYHLLAKHSI 1997 Query: 177 DELVLQRLRTKSTIQ 191 D + Q R + I+ Sbjct: 1998 DVNIFQERRHQVLIE 2012 >gi|290889294|gb|ADD69945.1| chromo-helicase DNA-binding protein [Zonotrichia albicollis] Length = 1808 Score = 35.4 bits (80), Expect = 4.6, Method: Compositional matrix adjust. Identities = 19/79 (24%), Positives = 39/79 (49%), Gaps = 6/79 (7%) Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 G G+NL +++F S W + Q R + G K+ V +Y L+ + +++E Sbjct: 865 GLGINLASADTVVIFDSDWNPQNDLQ------AQARAHRIGQKKQVNIYRLVTKGSVEED 918 Query: 180 VLQRLRTKSTIQDLLLNAL 198 +L+R + K + L++ + Sbjct: 919 ILERAKKKMVLDHLVIQRM 937 >gi|328773251|gb|EGF83288.1| hypothetical protein BATDEDRAFT_84829 [Batrachochytrium dendrobatidis JAM81] Length = 825 Score = 35.4 bits (80), Expect = 4.7, Method: Compositional matrix adjust. Identities = 32/146 (21%), Positives = 61/146 (41%), Gaps = 17/146 (11%) Query: 53 DEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTL-----------DKDPCTI 101 DE ++ L + +N + IV F S L +Q A + L +++ Sbjct: 656 DEVVRILAENQKNSNVSKTIVFSQFTSMLNVIQNALDETDILYCRYDGGMKRKEREQTLF 715 Query: 102 QEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGF 161 + KI ++ G+NL N ++ WW+ M+E + R + G Sbjct: 716 HFKSSEKINVMLISTKCGAAGINLTCA-NFVILVDPWWN-----PMMEEQAIGRVHRIGQ 769 Query: 162 KRAVFVYYLIAQNTIDELVLQRLRTK 187 + V V L+ ++TI+E V+++ + K Sbjct: 770 RNPVHVVRLVMKDTIEEKVMEKQKQK 795 >gi|239985588|ref|NP_031716.2| chromodomain-helicase-DNA-binding protein 1 [Mus musculus] gi|109732363|gb|AAI15823.1| Chromodomain helicase DNA binding protein 1 [Mus musculus] gi|148688507|gb|EDL20454.1| chromodomain helicase DNA binding protein 1 [Mus musculus] Length = 1711 Score = 35.4 bits (80), Expect = 4.7, Method: Compositional matrix adjust. Identities = 19/79 (24%), Positives = 39/79 (49%), Gaps = 6/79 (7%) Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 G G+NL +++F S W + Q R + G K+ V +Y L+ + +++E Sbjct: 866 GLGINLASADTVVIFDSDWNPQNDLQ------AQARAHRIGQKKQVNIYRLVTKGSVEED 919 Query: 180 VLQRLRTKSTIQDLLLNAL 198 +L+R + K + L++ + Sbjct: 920 ILERAKKKMVLDHLVIQRM 938 >gi|118373098|ref|XP_001019743.1| SNF2 family N-terminal domain containing protein [Tetrahymena thermophila] gi|89301510|gb|EAR99498.1| SNF2 family N-terminal domain containing protein [Tetrahymena thermophila SB210] Length = 1254 Score = 35.4 bits (80), Expect = 4.7, Method: Compositional matrix adjust. Identities = 21/64 (32%), Positives = 34/64 (53%), Gaps = 6/64 (9%) Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 G G+NL ++++ S W + Q M R + G K V VY LI++NTI+E Sbjct: 541 GLGINLATADTVVLYDSDWNPQMDLQAM------DRAHRIGQKNIVNVYRLISENTIEEK 594 Query: 180 VLQR 183 +++R Sbjct: 595 IIER 598 >gi|1345773|sp|P40201|CHD1_MOUSE RecName: Full=Chromodomain-helicase-DNA-binding protein 1; Short=CHD-1; AltName: Full=ATP-dependent helicase CHD1 gi|455015|gb|AAB08486.1| DNA-binding protein [Mus musculus] Length = 1711 Score = 35.4 bits (80), Expect = 4.7, Method: Compositional matrix adjust. Identities = 19/79 (24%), Positives = 39/79 (49%), Gaps = 6/79 (7%) Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 G G+NL +++F S W + Q R + G K+ V +Y L+ + +++E Sbjct: 866 GLGINLASADTVVIFDSDWNPQNDLQ------AQARAHRIGQKKQVNIYRLVTKGSVEED 919 Query: 180 VLQRLRTKSTIQDLLLNAL 198 +L+R + K + L++ + Sbjct: 920 ILERAKKKMVLDHLVIQRM 938 >gi|296194069|ref|XP_002744792.1| PREDICTED: chromodomain-helicase-DNA-binding protein 1 [Callithrix jacchus] Length = 1713 Score = 35.4 bits (80), Expect = 4.7, Method: Compositional matrix adjust. Identities = 19/79 (24%), Positives = 39/79 (49%), Gaps = 6/79 (7%) Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 G G+NL +++F S W + Q R + G K+ V +Y L+ + +++E Sbjct: 870 GLGINLASADTVVIFDSDWNPQNDLQ------AQARAHRIGQKKQVNIYRLVTKGSVEED 923 Query: 180 VLQRLRTKSTIQDLLLNAL 198 +L+R + K + L++ + Sbjct: 924 ILERAKKKMVLDHLVIQRM 942 >gi|293341309|ref|XP_002724934.1| PREDICTED: zinc finger, RAN-binding domain containing 3-like [Rattus norvegicus] Length = 1037 Score = 35.4 bits (80), Expect = 4.7, Method: Compositional matrix adjust. Identities = 24/84 (28%), Positives = 40/84 (47%), Gaps = 6/84 (7%) Query: 118 SCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 + G GL ++ VF L+WD +Q +R + G +V ++YLIA T+D Sbjct: 399 AAGQGLTFTAASHV-VFAELFWDPGHIKQAEDRA-----HRIGQCSSVNIHYLIANGTLD 452 Query: 178 ELVLQRLRTKSTIQDLLLNALKKE 201 L+ L K+ + LN K++ Sbjct: 453 SLMWAMLNRKAQVTGSTLNGRKEK 476 >gi|114600959|ref|XP_517850.2| PREDICTED: chromodomain helicase DNA binding protein 1 [Pan troglodytes] Length = 1710 Score = 35.4 bits (80), Expect = 4.7, Method: Compositional matrix adjust. Identities = 19/79 (24%), Positives = 39/79 (49%), Gaps = 6/79 (7%) Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 G G+NL +++F S W + Q R + G K+ V +Y L+ + +++E Sbjct: 868 GLGINLASADTVVIFDSDWNPQNDLQ------AQARAHRIGQKKQVNIYRLVTKGSVEED 921 Query: 180 VLQRLRTKSTIQDLLLNAL 198 +L+R + K + L++ + Sbjct: 922 ILERAKKKMVLDHLVIQRM 940 >gi|391640|dbj|BAA03262.1| ORF2 [Gallus gallus] Length = 560 Score = 35.4 bits (80), Expect = 4.7, Method: Compositional matrix adjust. Identities = 19/79 (24%), Positives = 39/79 (49%), Gaps = 6/79 (7%) Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 G G+NL +++F S W + Q R + G K+ V +Y L+ + +++E Sbjct: 116 GLGINLASADTVVIFDSDWNPQNDLQAQ------ARAHRIGQKKQVNIYRLVTKGSVEED 169 Query: 180 VLQRLRTKSTIQDLLLNAL 198 +L+R + K + L++ + Sbjct: 170 ILERAKKKMVLDHLVIQRM 188 >gi|84619206|emb|CAJ42330.1| SNF2 related domain [Streptomyces steffisburgensis] Length = 618 Score = 35.4 bits (80), Expect = 4.7, Method: Composition-based stats. Identities = 25/102 (24%), Positives = 44/102 (43%), Gaps = 13/102 (12%) Query: 110 PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYY 169 P+L + G GLNL +++ + WW+ +E R + G +R + V+ Sbjct: 512 PVLLLSLRAAGFGLNLTRANHVM-HYDRWWN-----PAVEEQATDRAHRIGQQRTLNVHA 565 Query: 170 LIAQNTIDELVLQRLRTKSTIQDLL-------LNALKKETIH 204 L+ TI++ + Q TK D++ L L E +H Sbjct: 566 LVTGGTIEDHIAQMHETKRGFADVVSGNTEAALAELSDEELH 607 >gi|2645429|gb|AAB87381.1| CHD1 [Homo sapiens] Length = 1709 Score = 35.4 bits (80), Expect = 4.7, Method: Compositional matrix adjust. Identities = 19/79 (24%), Positives = 39/79 (49%), Gaps = 6/79 (7%) Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 G G+NL +++F S W + Q R + G K+ V +Y L+ + +++E Sbjct: 868 GLGINLASADTVVIFDSDWNPQNDLQ------AQARAHRIGQKKQVNIYRLVTKGSVEED 921 Query: 180 VLQRLRTKSTIQDLLLNAL 198 +L+R + K + L++ + Sbjct: 922 ILERAKKKMVLDHLVIQRM 940 >gi|149726480|ref|XP_001504655.1| PREDICTED: chromodomain helicase DNA binding protein 1 [Equus caballus] Length = 1713 Score = 35.4 bits (80), Expect = 4.8, Method: Compositional matrix adjust. Identities = 19/79 (24%), Positives = 39/79 (49%), Gaps = 6/79 (7%) Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 G G+NL +++F S W + Q R + G K+ V +Y L+ + +++E Sbjct: 869 GLGINLASADTVVIFDSDWNPQNDLQ------AQARAHRIGQKKQVNIYRLVTKGSVEED 922 Query: 180 VLQRLRTKSTIQDLLLNAL 198 +L+R + K + L++ + Sbjct: 923 ILERAKKKMVLDHLVIQRM 941 >gi|47206405|emb|CAG01534.1| unnamed protein product [Tetraodon nigroviridis] Length = 1491 Score = 35.4 bits (80), Expect = 4.8, Method: Compositional matrix adjust. Identities = 19/79 (24%), Positives = 39/79 (49%), Gaps = 6/79 (7%) Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 G G+NL +++F S W + Q R + G K+ V +Y L+ + T++E Sbjct: 902 GLGINLASADTVVIFDSDWNPQNDLQAQ------ARAHRIGQKKQVNIYRLVTKGTVEED 955 Query: 180 VLQRLRTKSTIQDLLLNAL 198 +++R + K + L++ + Sbjct: 956 IIERAKKKMVLDHLVIQRM 974 >gi|326678432|ref|XP_002666261.2| PREDICTED: zinc finger Ran-binding domain-containing protein 3-like [Danio rerio] Length = 607 Score = 35.4 bits (80), Expect = 4.8, Method: Compositional matrix adjust. Identities = 24/86 (27%), Positives = 40/86 (46%), Gaps = 12/86 (13%) Query: 118 SCGHGLNLQYGGNILVFFSLWWD---LEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQN 174 + G GL ++ VF L+W+ +++ + RIG T V ++YLIA+ Sbjct: 96 AAGQGLTFTAASHV-VFAELYWNPGHIKQAEDRAHRIGQTA--------TVHIHYLIAKG 146 Query: 175 TIDELVLQRLRTKSTIQDLLLNALKK 200 T D ++ L K T+ LN K+ Sbjct: 147 TFDTVMWAMLNRKETVTGSALNGKKE 172 >gi|297675709|ref|XP_002815806.1| PREDICTED: chromodomain-helicase-DNA-binding protein 1-like [Pongo abelii] Length = 1709 Score = 35.4 bits (80), Expect = 4.8, Method: Compositional matrix adjust. Identities = 19/79 (24%), Positives = 39/79 (49%), Gaps = 6/79 (7%) Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 G G+NL +++F S W + Q R + G K+ V +Y L+ + +++E Sbjct: 868 GLGINLASADTVVIFDSDWNPQNDLQ------AQARAHRIGQKKQVNIYRLVTKGSVEED 921 Query: 180 VLQRLRTKSTIQDLLLNAL 198 +L+R + K + L++ + Sbjct: 922 ILERAKKKMVLDHLVIQRM 940 >gi|297791319|ref|XP_002863544.1| hypothetical protein ARALYDRAFT_917093 [Arabidopsis lyrata subsp. lyrata] gi|297309379|gb|EFH39803.1| hypothetical protein ARALYDRAFT_917093 [Arabidopsis lyrata subsp. lyrata] Length = 2251 Score = 35.4 bits (80), Expect = 4.9, Method: Composition-based stats. Identities = 23/97 (23%), Positives = 46/97 (47%), Gaps = 7/97 (7%) Query: 101 IQEWNEGKIPLLFA-HPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQA 159 I +N+ K +F +CG G+NL ++++ S D H + + R + Sbjct: 1068 IARFNQDKNRFVFLLSTRACGLGINLATADTVIIYDS---DFNPHADIQ---AMNRAHRI 1121 Query: 160 GFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 G + + VY L+ + +++E +LQ + K + L +N Sbjct: 1122 GQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFVN 1158 >gi|281350318|gb|EFB25902.1| hypothetical protein PANDA_008326 [Ailuropoda melanoleuca] Length = 1566 Score = 35.4 bits (80), Expect = 4.9, Method: Compositional matrix adjust. Identities = 19/79 (24%), Positives = 39/79 (49%), Gaps = 6/79 (7%) Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 G G+NL +++F S W + Q R + G K+ V +Y L+ + +++E Sbjct: 722 GLGINLASADTVVIFDSDWNPQNDLQ------AQARAHRIGQKKQVNIYRLVTKGSVEED 775 Query: 180 VLQRLRTKSTIQDLLLNAL 198 +L+R + K + L++ + Sbjct: 776 ILERAKKKMVLDHLVIQRM 794 >gi|242089493|ref|XP_002440579.1| hypothetical protein SORBIDRAFT_09g003430 [Sorghum bicolor] gi|241945864|gb|EES19009.1| hypothetical protein SORBIDRAFT_09g003430 [Sorghum bicolor] Length = 1127 Score = 35.4 bits (80), Expect = 4.9, Method: Compositional matrix adjust. Identities = 24/80 (30%), Positives = 41/80 (51%), Gaps = 6/80 (7%) Query: 118 SCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 + G GLNLQ +++F S W + QM ++ R + G K V V+ L++ +I+ Sbjct: 824 AGGLGLNLQTADTVIIFDSDW-----NPQM-DQQAEDRAHRIGQKNEVRVFVLVSVGSIE 877 Query: 178 ELVLQRLRTKSTIQDLLLNA 197 E +L R + K I ++ A Sbjct: 878 EEILDRAKQKMGIDAKVIQA 897 >gi|118378915|ref|XP_001022631.1| HSA family protein [Tetrahymena thermophila] gi|89304398|gb|EAS02386.1| HSA family protein [Tetrahymena thermophila SB210] Length = 1232 Score = 35.4 bits (80), Expect = 4.9, Method: Compositional matrix adjust. Identities = 23/78 (29%), Positives = 39/78 (50%), Gaps = 6/78 (7%) Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 G GLNLQ +++F S W + QM ++ R + G K V VY L+ I+E Sbjct: 821 GLGLNLQTADTVIIFDSDW-----NPQM-DQQAQDRAHRIGSKSEVRVYRLVTNTWIEEE 874 Query: 180 VLQRLRTKSTIQDLLLNA 197 +L + K + ++++ A Sbjct: 875 ILSKAAYKMGLDEMIIQA 892 >gi|45384402|ref|NP_990272.1| chromodomain-helicase-DNA-binding protein 1 [Gallus gallus] gi|2501846|gb|AAC60282.1| chromo-helicase-DNA-binding on the Z chromosome protein [Gallus gallus] Length = 1808 Score = 35.4 bits (80), Expect = 4.9, Method: Compositional matrix adjust. Identities = 19/79 (24%), Positives = 39/79 (49%), Gaps = 6/79 (7%) Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 G G+NL +++F S W + Q R + G K+ V +Y L+ + +++E Sbjct: 865 GLGINLASADTVVIFDSDWNPQNDLQ------AQARAHRIGQKKQVNIYRLVTKGSVEED 918 Query: 180 VLQRLRTKSTIQDLLLNAL 198 +L+R + K + L++ + Sbjct: 919 ILERAKKKMVLDHLVIQRM 937 >gi|302922109|ref|XP_003053398.1| hypothetical protein NECHADRAFT_65429 [Nectria haematococca mpVI 77-13-4] gi|256734339|gb|EEU47685.1| hypothetical protein NECHADRAFT_65429 [Nectria haematococca mpVI 77-13-4] Length = 1013 Score = 35.4 bits (80), Expect = 4.9, Method: Compositional matrix adjust. Identities = 28/106 (26%), Positives = 52/106 (49%), Gaps = 7/106 (6%) Query: 101 IQEWNEG-KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQA 159 I E+N+ +IP+ + G G+NL +++F D ++ Q + R + Sbjct: 893 IDEFNDDPEIPVFLLTTGAGGTGINLTAANKVIIF-----DQSDNPQ-DDIQAENRAHRL 946 Query: 160 GFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIHV 205 G KR V + LIA +TI+EL+ + + K + + + A++ E V Sbjct: 947 GQKRDVEIIRLIASHTIEELIYKACQKKIELANKVTGAVEDEDAAV 992 >gi|269969347|sp|B6ZLK2|CHD1_CHICK RecName: Full=Chromodomain-helicase-DNA-binding protein 1; Short=CHD-1; AltName: Full=ATP-dependent helicase CHD1 gi|218117883|dbj|BAH03306.1| chromodomain-helicase-DNA-binding protein 1 [Gallus gallus] Length = 1719 Score = 35.4 bits (80), Expect = 4.9, Method: Compositional matrix adjust. Identities = 19/79 (24%), Positives = 39/79 (49%), Gaps = 6/79 (7%) Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 G G+NL +++F S W + Q R + G K+ V +Y L+ + +++E Sbjct: 864 GLGINLASADTVVIFDSDWNPQNDLQ------AQARAHRIGQKKQVNIYRLVTKGSVEED 917 Query: 180 VLQRLRTKSTIQDLLLNAL 198 +L+R + K + L++ + Sbjct: 918 ILERAKKKMVLDHLVIQRM 936 >gi|115462049|ref|NP_001054624.1| Os05g0144300 [Oryza sativa Japonica Group] gi|53749343|gb|AAU90202.1| putative transcriptional regulator [Oryza sativa Japonica Group] gi|113578175|dbj|BAF16538.1| Os05g0144300 [Oryza sativa Japonica Group] Length = 1128 Score = 35.4 bits (80), Expect = 5.0, Method: Compositional matrix adjust. Identities = 25/87 (28%), Positives = 42/87 (48%), Gaps = 6/87 (6%) Query: 111 LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYL 170 L + G GLNLQ +++F S W + QM ++ R + G K V V+ L Sbjct: 818 LFLLSTRAGGLGLNLQTADTVIIFDSDW-----NPQMDQQ-AEDRAHRIGQKNEVRVFVL 871 Query: 171 IAQNTIDELVLQRLRTKSTIQDLLLNA 197 ++ +I+E +L R + K I ++ A Sbjct: 872 VSVGSIEEEILDRAKQKMGIDAKVIQA 898 >gi|124807036|ref|XP_001350892.1| DNA repair protein rhp16, putative [Plasmodium falciparum 3D7] gi|23497022|gb|AAN36572.1|AE014852_16 DNA repair protein rhp16, putative [Plasmodium falciparum 3D7] Length = 1647 Score = 35.4 bits (80), Expect = 5.0, Method: Composition-based stats. Identities = 24/85 (28%), Positives = 39/85 (45%), Gaps = 10/85 (11%) Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 G GLNLQ I + WW+ Q I+ R + G + V+ I +NT++E Sbjct: 1557 GEGLNLQVANRIFI-VDPWWNPAAELQAIQ-----RAHRIGQTKTVYAIRFIIENTVEEK 1610 Query: 180 VLQRLRTKSTIQDLLL----NALKK 200 ++Q K + D + NA++K Sbjct: 1611 IIQLQNKKQLVFDSTIGDSGNAMQK 1635 >gi|255528070|ref|ZP_05394903.1| Non-specific serine/threonine protein kinase [Clostridium carboxidivorans P7] gi|296186302|ref|ZP_06854706.1| SNF2 family [Clostridium carboxidivorans P7] gi|255508235|gb|EET84642.1| Non-specific serine/threonine protein kinase [Clostridium carboxidivorans P7] gi|296049103|gb|EFG88533.1| SNF2 family [Clostridium carboxidivorans P7] Length = 1081 Score = 35.4 bits (80), Expect = 5.0, Method: Composition-based stats. Identities = 20/81 (24%), Positives = 41/81 (50%), Gaps = 6/81 (7%) Query: 101 IQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 + ++N+G+ + + G GLNL ++++ F WW+ +E R + G Sbjct: 969 VNDFNQGENSVFLISLKAGGTGLNLT-SADVVIHFDPWWN-----PAVEEQATDRAHRIG 1022 Query: 161 FKRAVFVYYLIAQNTIDELVL 181 K+ V V ++A+ TI+E ++ Sbjct: 1023 QKKVVEVIKIVAKGTIEEKII 1043 >gi|170754301|ref|YP_001781764.1| phage helicase [Clostridium botulinum B1 str. Okra] gi|169119513|gb|ACA43349.1| phage helicase [Clostridium botulinum B1 str. Okra] Length = 365 Score = 35.4 bits (80), Expect = 5.0, Method: Compositional matrix adjust. Identities = 42/207 (20%), Positives = 88/207 (42%), Gaps = 33/207 (15%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEV 61 K+Y KF+++ + + S +K + QLA+ + + K+ +L+ Sbjct: 182 KEYKKFKKDRLITINDTELVGDTSLTKMLYLRQLAS------------QYNPNKLSSLKD 229 Query: 62 IIEKANAAPIIVAYHFNSDL-------ARLQK--AFPQGRTLDKDPCTIQEWNEGKIPLL 112 ++E + +I+ Y+F ++ RL+K + G+T D ++ + ++ Sbjct: 230 LLE-STEDRVIIFYNFTEEMEQIKEVCGRLEKPISIVNGQTKD-----LENYKTKDNTVV 283 Query: 113 FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIA 172 + GLNLQ N ++++SL E +Q R + G R +YLI Sbjct: 284 LVQYQAGAMGLNLQLS-NKIIYYSLPLASELFEQ-----SKKRTHRIGQTRTCMYWYLIT 337 Query: 173 QNTIDELVLQRLRTKSTIQDLLLNALK 199 + I+E + + L+ + + L L+ Sbjct: 338 KGCIEEQIFETLKERRDYTNKLFEELE 364 >gi|109078102|ref|XP_001097125.1| PREDICTED: chromodomain-helicase-DNA-binding protein 1-like [Macaca mulatta] Length = 1712 Score = 35.4 bits (80), Expect = 5.0, Method: Compositional matrix adjust. Identities = 19/79 (24%), Positives = 39/79 (49%), Gaps = 6/79 (7%) Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 G G+NL +++F S W + Q R + G K+ V +Y L+ + +++E Sbjct: 870 GLGINLASADTVVIFDSDWNPQNDLQ------AQARAHRIGQKKQVNIYRLVTKGSVEED 923 Query: 180 VLQRLRTKSTIQDLLLNAL 198 +L+R + K + L++ + Sbjct: 924 ILERAKKKMVLDHLVIQRM 942 >gi|31322808|gb|AAP31846.1| Brg1p [Tetrahymena thermophila] Length = 1228 Score = 35.4 bits (80), Expect = 5.0, Method: Compositional matrix adjust. Identities = 26/105 (24%), Positives = 49/105 (46%), Gaps = 8/105 (7%) Query: 95 DKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIG 152 D+ + ++N+ P + + G GLNLQ +++F S W + QM ++ Sbjct: 790 DERGVKMAQFNQPNSPYNVFILSTRAGGLGLNLQTADTVIIFDSDW-----NPQM-DQQA 843 Query: 153 VTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 R + G K V VY L+ I+E +L + K + ++++ A Sbjct: 844 QDRAHRIGSKSEVRVYRLVTNTWIEEEILSKAAYKMGLDEMIIQA 888 >gi|311249889|ref|XP_003123851.1| PREDICTED: chromodomain-helicase-DNA-binding protein 1-like [Sus scrofa] Length = 1706 Score = 35.4 bits (80), Expect = 5.2, Method: Compositional matrix adjust. Identities = 19/79 (24%), Positives = 39/79 (49%), Gaps = 6/79 (7%) Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 G G+NL +++F S W + Q R + G K+ V +Y L+ + +++E Sbjct: 862 GLGINLASADTVVIFDSDWNPQNDLQ------AQARAHRIGQKKQVNIYRLVTKGSVEED 915 Query: 180 VLQRLRTKSTIQDLLLNAL 198 +L+R + K + L++ + Sbjct: 916 ILERAKKKMVLDHLVIQRM 934 >gi|158259161|dbj|BAF85539.1| unnamed protein product [Homo sapiens] Length = 1049 Score = 35.4 bits (80), Expect = 5.2, Method: Compositional matrix adjust. Identities = 19/79 (24%), Positives = 39/79 (49%), Gaps = 6/79 (7%) Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 G G+NL +++F S W + Q R + G K+ V +Y L+ + T++E Sbjct: 871 GLGINLASADTVVIFDSDWNPQNDLQ------AQARAHRIGQKKQVNIYRLVTKGTVEEE 924 Query: 180 VLQRLRTKSTIQDLLLNAL 198 +++R + K + L++ + Sbjct: 925 IIERAKKKMVLDHLVIQRM 943 >gi|332007781|gb|AED95164.1| chromatin remodeling 4 protein [Arabidopsis thaliana] Length = 2223 Score = 35.4 bits (80), Expect = 5.2, Method: Composition-based stats. Identities = 23/97 (23%), Positives = 46/97 (47%), Gaps = 7/97 (7%) Query: 101 IQEWNEGKIPLLFA-HPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQA 159 I +N+ K +F +CG G+NL ++++ S D H + + R + Sbjct: 1065 IARFNQDKNRFVFLLSTRACGLGINLATADTVIIYDS---DFNPHADIQ---AMNRAHRI 1118 Query: 160 GFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 G + + VY L+ + +++E +LQ + K + L +N Sbjct: 1119 GQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFVN 1155 >gi|284991028|ref|YP_003409582.1| helicase domain-containing protein [Geodermatophilus obscurus DSM 43160] gi|284064273|gb|ADB75211.1| helicase domain protein [Geodermatophilus obscurus DSM 43160] Length = 714 Score = 35.4 bits (80), Expect = 5.2, Method: Composition-based stats. Identities = 24/97 (24%), Positives = 43/97 (44%), Gaps = 6/97 (6%) Query: 105 NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA 164 N+ + + + G GLNLQ NI++ W D E+ Q + R + G Sbjct: 595 NDPDVAVAVCSLTAAGVGLNLQVASNIVLAELSWTDAEQTQ------AIDRSHRIGQTEP 648 Query: 165 VFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 V + +IA TID + + + +K+ + L+ +E Sbjct: 649 VTAWRIIAAQTIDARIAELIDSKAGLAARALDGSDEE 685 >gi|167539902|ref|XP_001741408.1| hypothetical protein [Entamoeba dispar SAW760] gi|165894110|gb|EDR22194.1| hypothetical protein, conserved [Entamoeba dispar SAW760] Length = 956 Score = 35.4 bits (80), Expect = 5.2, Method: Compositional matrix adjust. Identities = 24/92 (26%), Positives = 43/92 (46%), Gaps = 6/92 (6%) Query: 106 EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 E +I + + G G+ L + + +VF L+W +Q +R+ + G K V Sbjct: 467 EKRIRIAILSVTAAGTGITL-HSADTVVFAELYWTPGVLRQAEDRV-----HRIGQKNDV 520 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 ++YLI + T+D+L+ L K I L+ Sbjct: 521 RIFYLIGKQTVDDLIWPLLEKKLKISGETLDG 552 >gi|145358870|ref|NP_199293.2| CHR4 (CHROMATIN REMODELING 4); ATP binding / DNA binding / chromatin binding / helicase/ nucleic acid binding / protein binding / zinc ion binding [Arabidopsis thaliana] Length = 2242 Score = 35.4 bits (80), Expect = 5.2, Method: Composition-based stats. Identities = 23/97 (23%), Positives = 46/97 (47%), Gaps = 7/97 (7%) Query: 101 IQEWNEGKIPLLFA-HPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQA 159 I +N+ K +F +CG G+NL ++++ S D H + + R + Sbjct: 1065 IARFNQDKNRFVFLLSTRACGLGINLATADTVIIYDS---DFNPHADIQ---AMNRAHRI 1118 Query: 160 GFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 G + + VY L+ + +++E +LQ + K + L +N Sbjct: 1119 GQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFVN 1155 >gi|2660669|gb|AAC79140.1| human Mi-2 autoantigen-like protein [Arabidopsis thaliana] gi|9758384|dbj|BAB08833.1| helicase-like protein [Arabidopsis thaliana] Length = 2228 Score = 35.4 bits (80), Expect = 5.2, Method: Composition-based stats. Identities = 23/97 (23%), Positives = 46/97 (47%), Gaps = 7/97 (7%) Query: 101 IQEWNEGKIPLLFA-HPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQA 159 I +N+ K +F +CG G+NL ++++ S D H + + R + Sbjct: 1051 IARFNQDKNRFVFLLSTRACGLGINLATADTVIIYDS---DFNPHADIQ---AMNRAHRI 1104 Query: 160 GFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 G + + VY L+ + +++E +LQ + K + L +N Sbjct: 1105 GQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFVN 1141 >gi|311742708|ref|ZP_07716517.1| helicase [Aeromicrobium marinum DSM 15272] gi|311314336|gb|EFQ84244.1| helicase [Aeromicrobium marinum DSM 15272] Length = 717 Score = 35.4 bits (80), Expect = 5.2, Method: Composition-based stats. Identities = 21/96 (21%), Positives = 43/96 (44%), Gaps = 6/96 (6%) Query: 101 IQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 + E+ G +P+L + G GLNL ++ + + WW+ +E R + G Sbjct: 606 VDEFQAGDLPVLLLSLRAGGTGLNLTAADHV-IHYDRWWN-----PAVEDQATDRAHRIG 659 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + V V+ L T+++ + + K + D ++N Sbjct: 660 QTKPVQVHRLTVGGTVEDGIADLIERKRALADAVIN 695 >gi|154299240|ref|XP_001550040.1| hypothetical protein BC1G_11798 [Botryotinia fuckeliana B05.10] gi|150857501|gb|EDN32693.1| hypothetical protein BC1G_11798 [Botryotinia fuckeliana B05.10] Length = 1433 Score = 35.4 bits (80), Expect = 5.2, Method: Compositional matrix adjust. Identities = 21/70 (30%), Positives = 37/70 (52%), Gaps = 6/70 (8%) Query: 118 SCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 + G GLNLQ ++++ S W HQ + + R + G K V + LI+ N+++ Sbjct: 939 AGGLGLNLQTADTVIIYDSDW---NPHQDLQAQ---DRAHRIGQKNEVRILRLISSNSVE 992 Query: 178 ELVLQRLRTK 187 E +L+R + K Sbjct: 993 EKILERAKFK 1002 >gi|255955967|ref|XP_002568736.1| Pc21g17380 [Penicillium chrysogenum Wisconsin 54-1255] gi|211590447|emb|CAP96635.1| Pc21g17380 [Penicillium chrysogenum Wisconsin 54-1255] Length = 1399 Score = 35.4 bits (80), Expect = 5.3, Method: Compositional matrix adjust. Identities = 23/82 (28%), Positives = 42/82 (51%), Gaps = 6/82 (7%) Query: 118 SCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 + G GLNLQ ++++ S W HQ + + R + G K V + LI+ N+++ Sbjct: 930 AGGLGLNLQTADTVIIYDSDW---NPHQDLQAQ---DRAHRIGQKNEVRILRLISSNSVE 983 Query: 178 ELVLQRLRTKSTIQDLLLNALK 199 E +L+R + K + ++ A K Sbjct: 984 EKILERAQFKLDMDGKVIQAGK 1005 >gi|183233301|ref|XP_654593.2| helicase [Entamoeba histolytica HM-1:IMSS] gi|169801642|gb|EAL49206.2| helicase, putative [Entamoeba histolytica HM-1:IMSS] Length = 956 Score = 35.0 bits (79), Expect = 5.4, Method: Compositional matrix adjust. Identities = 24/92 (26%), Positives = 43/92 (46%), Gaps = 6/92 (6%) Query: 106 EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 E +I + + G G+ L + + +VF L+W +Q +R+ + G K V Sbjct: 467 EKRIRIAILSVTAAGTGITL-HSADTVVFAELYWTPGVLRQAEDRV-----HRIGQKNDV 520 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 ++YLI + T+D+L+ L K I L+ Sbjct: 521 RIFYLIGKQTVDDLIWPLLEKKLKISGETLDG 552 >gi|156051220|ref|XP_001591571.1| hypothetical protein SS1G_07017 [Sclerotinia sclerotiorum 1980] gi|154704795|gb|EDO04534.1| hypothetical protein SS1G_07017 [Sclerotinia sclerotiorum 1980 UF-70] Length = 1410 Score = 35.0 bits (79), Expect = 5.4, Method: Compositional matrix adjust. Identities = 21/70 (30%), Positives = 37/70 (52%), Gaps = 6/70 (8%) Query: 118 SCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 + G GLNLQ ++++ S W HQ + + R + G K V + LI+ N+++ Sbjct: 920 AGGLGLNLQTADTVIIYDSDW---NPHQDLQAQ---DRAHRIGQKNEVRILRLISSNSVE 973 Query: 178 ELVLQRLRTK 187 E +L+R + K Sbjct: 974 EKILERAKFK 983 >gi|297835518|ref|XP_002885641.1| hypothetical protein ARALYDRAFT_342596 [Arabidopsis lyrata subsp. lyrata] gi|297331481|gb|EFH61900.1| hypothetical protein ARALYDRAFT_342596 [Arabidopsis lyrata subsp. lyrata] Length = 1122 Score = 35.0 bits (79), Expect = 5.4, Method: Composition-based stats. Identities = 17/65 (26%), Positives = 34/65 (52%), Gaps = 6/65 (9%) Query: 111 LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYL 170 +L A +C G++L +++ +W +E ++R + G KRAVF+Y+L Sbjct: 993 VLLASTKACSEGISLVGASRVVILDVVW------NPSVESQAISRAFRLGQKRAVFIYHL 1046 Query: 171 IAQNT 175 + ++T Sbjct: 1047 MVKDT 1051 >gi|189198415|ref|XP_001935545.1| ISWI chromatin-remodeling complex ATPase ISW2 [Pyrenophora tritici-repentis Pt-1C-BFP] gi|187981493|gb|EDU48119.1| ISWI chromatin-remodeling complex ATPase ISW2 [Pyrenophora tritici-repentis Pt-1C-BFP] Length = 916 Score = 35.0 bits (79), Expect = 5.4, Method: Composition-based stats. Identities = 20/76 (26%), Positives = 37/76 (48%), Gaps = 6/76 (7%) Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 G G+NL +++F S W ++ Q M R + G R V VY +NT+++ Sbjct: 751 GQGINLAAADTVILFDSDWNPQQDLQAM------DRAHRIGQTRNVIVYRFATRNTVEQK 804 Query: 180 VLQRLRTKSTIQDLLL 195 +L+ K ++ L++ Sbjct: 805 LLESAEAKRRLEKLVI 820 >gi|195124269|ref|XP_002006616.1| GI18484 [Drosophila mojavensis] gi|193911684|gb|EDW10551.1| GI18484 [Drosophila mojavensis] Length = 603 Score = 35.0 bits (79), Expect = 5.5, Method: Compositional matrix adjust. Identities = 31/110 (28%), Positives = 49/110 (44%), Gaps = 12/110 (10%) Query: 80 DLARLQKAFPQGRTLDKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSL 137 D RL P D+D I+E+N P + + G G+NL ++++ S Sbjct: 387 DYCRLDGQTPHE---DRDKL-IREYNMENSPKFIFMLSTRAGGLGINLATADVVIIYDSD 442 Query: 138 WWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTK 187 W + Q M R + G K+ V V+ LIA+ T+DE +L+ K Sbjct: 443 WNPQMDLQAM------DRAHRIGQKKQVRVFRLIAEKTVDEKILEHANIK 486 >gi|149730550|ref|XP_001489638.1| PREDICTED: zinc finger, RAN-binding domain containing 3 [Equus caballus] Length = 1072 Score = 35.0 bits (79), Expect = 5.5, Method: Compositional matrix adjust. Identities = 24/84 (28%), Positives = 41/84 (48%), Gaps = 6/84 (7%) Query: 118 SCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 + G GL ++ VF L+WD +Q +R + G +V ++YLIA+ T+D Sbjct: 399 AAGQGLTFTAATHV-VFAELYWDPGHIKQAEDRA-----HRIGQCSSVNIHYLIAKGTLD 452 Query: 178 ELVLQRLRTKSTIQDLLLNALKKE 201 L+ L K+ + LN K++ Sbjct: 453 TLMWGMLNRKAQVTGSTLNGRKEQ 476 >gi|126651081|ref|ZP_01723292.1| helicase (Snf2/Rad54 family) protein [Bacillus sp. B14905] gi|126592282|gb|EAZ86331.1| helicase (Snf2/Rad54 family) protein [Bacillus sp. B14905] Length = 504 Score = 35.0 bits (79), Expect = 5.5, Method: Compositional matrix adjust. Identities = 29/88 (32%), Positives = 47/88 (53%), Gaps = 13/88 (14%) Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 G G+NLQ+ ++ + + L W+ + +Q RIG R + G + V +Y L +NTI+E Sbjct: 421 GEGINLQFCHHV-INYDLPWNPMKLEQ---RIG--RVHRLGQEHDVHIYNLAIENTIEEK 474 Query: 180 VLQRLRTKSTI-------QDLLLNALKK 200 +L+ L TK + D +L LKK Sbjct: 475 ILELLHTKIDVFEKVVGDLDAILTNLKK 502 >gi|330922513|ref|XP_003299868.1| hypothetical protein PTT_10956 [Pyrenophora teres f. teres 0-1] gi|311326280|gb|EFQ92036.1| hypothetical protein PTT_10956 [Pyrenophora teres f. teres 0-1] Length = 916 Score = 35.0 bits (79), Expect = 5.5, Method: Composition-based stats. Identities = 20/76 (26%), Positives = 37/76 (48%), Gaps = 6/76 (7%) Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 G G+NL +++F S W ++ Q M R + G R V VY +NT+++ Sbjct: 751 GQGINLAAADTVILFDSDWNPQQDLQAM------DRAHRIGQTRNVIVYRFATRNTVEQK 804 Query: 180 VLQRLRTKSTIQDLLL 195 +L+ K ++ L++ Sbjct: 805 LLESAEAKRRLEKLVI 820 >gi|300708724|ref|XP_002996536.1| hypothetical protein NCER_100376 [Nosema ceranae BRL01] gi|239605845|gb|EEQ82865.1| hypothetical protein NCER_100376 [Nosema ceranae BRL01] Length = 594 Score = 35.0 bits (79), Expect = 5.5, Method: Compositional matrix adjust. Identities = 21/76 (27%), Positives = 36/76 (47%), Gaps = 6/76 (7%) Query: 105 NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA 164 N G + + +C GL L ++VF L+W+ Q +RI + G + Sbjct: 483 NNGNVRVALLSVTACNTGLTLT-AAKLVVFAELYWNPGTLLQAEDRI-----HRIGQSSS 536 Query: 165 VFVYYLIAQNTIDELV 180 V ++YL+ + T+DE V Sbjct: 537 VDIHYLVCKGTVDEYV 552 >gi|238880670|gb|EEQ44308.1| SNF2-family ATP dependent chromatin remodeling factor snf21 [Candida albicans WO-1] Length = 1302 Score = 35.0 bits (79), Expect = 5.5, Method: Compositional matrix adjust. Identities = 23/82 (28%), Positives = 41/82 (50%), Gaps = 6/82 (7%) Query: 118 SCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 + G GLNLQ +++F + W HQ + + R + G K V + LI ++++ Sbjct: 898 AGGLGLNLQTADTVIIFDTDW---NPHQDLQAQ---DRAHRIGQKNEVRILRLITNDSVE 951 Query: 178 ELVLQRLRTKSTIQDLLLNALK 199 E++L+R K I ++ A K Sbjct: 952 EVILERAHQKLDIDGKVIQAGK 973 >gi|114581132|ref|XP_515805.2| PREDICTED: zinc finger, RAN-binding domain containing 3 [Pan troglodytes] Length = 977 Score = 35.0 bits (79), Expect = 5.5, Method: Compositional matrix adjust. Identities = 24/84 (28%), Positives = 40/84 (47%), Gaps = 6/84 (7%) Query: 118 SCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 + G GL ++ VF L+WD +Q +R + G +V ++YLIA T+D Sbjct: 591 AAGQGLTFTAASHV-VFAELYWDPGHIKQAEDRA-----HRIGQCSSVNIHYLIANGTLD 644 Query: 178 ELVLQRLRTKSTIQDLLLNALKKE 201 L+ L K+ + LN K++ Sbjct: 645 TLMWGMLNRKAQVTGSTLNGRKEK 668 >gi|68471523|ref|XP_720068.1| hypothetical protein CaO19.7869 [Candida albicans SC5314] gi|68471790|ref|XP_719938.1| hypothetical protein CaO19.239 [Candida albicans SC5314] gi|46441784|gb|EAL01078.1| hypothetical protein CaO19.239 [Candida albicans SC5314] gi|46441919|gb|EAL01212.1| hypothetical protein CaO19.7869 [Candida albicans SC5314] Length = 1303 Score = 35.0 bits (79), Expect = 5.5, Method: Compositional matrix adjust. Identities = 23/82 (28%), Positives = 41/82 (50%), Gaps = 6/82 (7%) Query: 118 SCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 + G GLNLQ +++F + W HQ + + R + G K V + LI ++++ Sbjct: 898 AGGLGLNLQTADTVIIFDTDW---NPHQDLQAQ---DRAHRIGQKNEVRILRLITNDSVE 951 Query: 178 ELVLQRLRTKSTIQDLLLNALK 199 E++L+R K I ++ A K Sbjct: 952 EVILERAHQKLDIDGKVIQAGK 973 >gi|241952923|ref|XP_002419183.1| ATP-dependent helicase, putative; chromatin structure-remodeling complex protein, putative; nuclear protein Sth1/Nps1 homologue, putative [Candida dubliniensis CD36] gi|223642523|emb|CAX42772.1| ATP-dependent helicase, putative [Candida dubliniensis CD36] Length = 1300 Score = 35.0 bits (79), Expect = 5.6, Method: Compositional matrix adjust. Identities = 23/82 (28%), Positives = 41/82 (50%), Gaps = 6/82 (7%) Query: 118 SCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 + G GLNLQ +++F + W HQ + + R + G K V + LI ++++ Sbjct: 893 AGGLGLNLQTADTVIIFDTDW---NPHQDLQAQ---DRAHRIGQKNEVRILRLITNDSVE 946 Query: 178 ELVLQRLRTKSTIQDLLLNALK 199 E++L+R K I ++ A K Sbjct: 947 EVILERAHQKLDIDGKVIQAGK 968 >gi|19114237|ref|NP_593325.1| fun thirty related protein Fft1 [Schizosaccharomyces pombe 972h-] gi|74676241|sp|P87114|FFT1_SCHPO RecName: Full=Uncharacterized ATP-dependent helicase fft1; AltName: Full=Fun thirty-related protein 1 gi|2094863|emb|CAB08602.1| fun thirty related protein Fft1 [Schizosaccharomyces pombe] Length = 944 Score = 35.0 bits (79), Expect = 5.6, Method: Compositional matrix adjust. Identities = 25/77 (32%), Positives = 38/77 (49%), Gaps = 6/77 (7%) Query: 118 SCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 S G G+NL NI++ F ++ + Q R + G R V VY LI +NTI+ Sbjct: 841 SGGFGINLT-CANIVILFDCSFNPFDDMQ-----AEDRAHRVGQTRPVHVYRLITKNTIE 894 Query: 178 ELVLQRLRTKSTIQDLL 194 E + + TK T++ L Sbjct: 895 ENIRRLANTKLTLESSL 911 >gi|15230098|ref|NP_189077.1| chr40 (chromatin remodeling 40); ATP binding / DNA binding / helicase/ nucleic acid binding [Arabidopsis thaliana] gi|11994696|dbj|BAB02934.1| unnamed protein product [Arabidopsis thaliana] Length = 1132 Score = 35.0 bits (79), Expect = 5.6, Method: Composition-based stats. Identities = 17/65 (26%), Positives = 34/65 (52%), Gaps = 6/65 (9%) Query: 111 LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYL 170 +L A +C G++L +++ +W +E ++R + G KRAVF+Y+L Sbjct: 1003 VLLASTKACSEGISLVGASRVVILDVVW------NPSVESQAISRAFRIGQKRAVFIYHL 1056 Query: 171 IAQNT 175 + ++T Sbjct: 1057 MVKDT 1061 >gi|66358754|ref|XP_626555.1| SWI/SNF related transcriptional regulator ATpase [Cryptosporidium parvum Iowa II] gi|46227736|gb|EAK88656.1| SWI/SNF related putative transcriptional regulator ATpase [Cryptosporidium parvum Iowa II] Length = 1552 Score = 35.0 bits (79), Expect = 5.6, Method: Composition-based stats. Identities = 24/78 (30%), Positives = 40/78 (51%), Gaps = 6/78 (7%) Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 G GLNLQ +++F S W HQ + + +R + G K V V ++ + ++EL Sbjct: 970 GLGLNLQAADTVIIFDSDW---NPHQDLQAQ---SRAHRMGQKNEVRVLRFVSISGVEEL 1023 Query: 180 VLQRLRTKSTIQDLLLNA 197 VL+R + K I ++ A Sbjct: 1024 VLKRAQKKLEIDHKIIQA 1041 >gi|301062656|ref|ZP_07203283.1| SNF2 family N-terminal domain protein [delta proteobacterium NaphS2] gi|300443246|gb|EFK07384.1| SNF2 family N-terminal domain protein [delta proteobacterium NaphS2] Length = 895 Score = 35.0 bits (79), Expect = 5.6, Method: Compositional matrix adjust. Identities = 23/87 (26%), Positives = 39/87 (44%), Gaps = 6/87 (6%) Query: 105 NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA 164 + G +P + + G GLNL N ++ F WW+ +E R + G K+ Sbjct: 787 SPGYVPFMVLSLKAGGIGLNLTE-ANHVIHFDRWWN-----PAVENQATDRAFRIGQKKN 840 Query: 165 VFVYYLIAQNTIDELVLQRLRTKSTIQ 191 V V+ + Q T++E + L KS + Sbjct: 841 VVVHKFLTQGTVEEKIDAMLEEKSRLS 867 >gi|221488620|gb|EEE26834.1| DNA repair and recombination protein RAD54, putative [Toxoplasma gondii GT1] Length = 872 Score = 35.0 bits (79), Expect = 5.7, Method: Composition-based stats. Identities = 22/77 (28%), Positives = 39/77 (50%), Gaps = 6/77 (7%) Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 G G+NL G N LV F W+ +Q + R+ + G K++ ++Y + TI+E Sbjct: 594 GCGVNL-IGANRLVLFDPDWNPANDKQALARVW-----RDGQKKSCYIYRFFSTGTIEEK 647 Query: 180 VLQRLRTKSTIQDLLLN 196 + QR K + +L++ Sbjct: 648 IYQRQICKDGLSAMLVS 664 >gi|237837635|ref|XP_002368115.1| DNA repair protein RAD54, putative [Toxoplasma gondii ME49] gi|211965779|gb|EEB00975.1| DNA repair protein RAD54, putative [Toxoplasma gondii ME49] gi|221509119|gb|EEE34688.1| transcriptional regulator atrx, putative [Toxoplasma gondii VEG] Length = 873 Score = 35.0 bits (79), Expect = 5.7, Method: Composition-based stats. Identities = 22/77 (28%), Positives = 39/77 (50%), Gaps = 6/77 (7%) Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 G G+NL G N LV F W+ +Q + R+ + G K++ ++Y + TI+E Sbjct: 594 GCGVNL-IGANRLVLFDPDWNPANDKQALARVW-----RDGQKKSCYIYRFFSTGTIEEK 647 Query: 180 VLQRLRTKSTIQDLLLN 196 + QR K + +L++ Sbjct: 648 IYQRQICKDGLSAMLVS 664 >gi|75764646|ref|ZP_00744080.1| SWF/SNF family helicase [Bacillus thuringiensis serovar israelensis ATCC 35646] gi|74487868|gb|EAO51650.1| SWF/SNF family helicase [Bacillus thuringiensis serovar israelensis ATCC 35646] Length = 340 Score = 35.0 bits (79), Expect = 5.8, Method: Compositional matrix adjust. Identities = 45/195 (23%), Positives = 85/195 (43%), Gaps = 20/195 (10%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEV 61 K Y++F++ ++ E + A+K + QLA Y+E K ++ ++ Sbjct: 156 KMYNEFKKHHIIEIGEELLIGDTPAAKKLYLRQLAGS---YNEHK---------LQYIKD 203 Query: 62 IIEKANAAPIIVAYHFNSDLARLQKAFPQG-RTLDKDPCTIQEWNEGKIPLLFAHPASCG 120 +IE N II+ Y+F + L + T++ D + + + + + Sbjct: 204 LIESTNDR-IIIFYNFKKEYMALVDLIERPIATINGDIKDLSAYEKHDNSVTLIQYQAGA 262 Query: 121 HGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELV 180 GLNLQ N +V+F+L + ++ E+ R + G KR F YYL+ +I+ + Sbjct: 263 MGLNLQ-KANKIVYFTL----TDKSELFEQ-SKKRTLRIGQKRLGFYYYLLTDGSIEWRM 316 Query: 181 LQRLRTKSTIQDLLL 195 L L+ + D L Sbjct: 317 LDVLKERRDYTDALF 331 >gi|317144593|ref|XP_001820221.2| SNF2 family helicase [Aspergillus oryzae RIB40] Length = 1183 Score = 35.0 bits (79), Expect = 5.9, Method: Compositional matrix adjust. Identities = 22/87 (25%), Positives = 43/87 (49%), Gaps = 8/87 (9%) Query: 102 QEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGF 161 +E + ++ L+ H AS HGL++ + + +W Q +E + R + G Sbjct: 970 REQEDVRVLLMDLHQAS--HGLHIANASRVFIVNPIW------QPNVESQAIKRAHRIGQ 1021 Query: 162 KRAVFVYYLIAQNTIDELVLQRLRTKS 188 R VFV L+ + T+++ +L+R + S Sbjct: 1022 TRPVFVETLVLKGTLEDKMLERRKAMS 1048 >gi|260940993|ref|XP_002615336.1| hypothetical protein CLUG_04218 [Clavispora lusitaniae ATCC 42720] gi|238850626|gb|EEQ40090.1| hypothetical protein CLUG_04218 [Clavispora lusitaniae ATCC 42720] Length = 1269 Score = 35.0 bits (79), Expect = 5.9, Method: Compositional matrix adjust. Identities = 23/82 (28%), Positives = 41/82 (50%), Gaps = 6/82 (7%) Query: 118 SCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 + G GLNLQ +++F + W HQ + + R + G K V + LI ++++ Sbjct: 897 AGGLGLNLQSADTVIIFDTDW---NPHQDLQAQ---DRAHRIGQKNEVRILRLITNDSVE 950 Query: 178 ELVLQRLRTKSTIQDLLLNALK 199 E++L+R K I ++ A K Sbjct: 951 EVILERAHQKLDIDGKVIQAGK 972 >gi|296132117|ref|YP_003639364.1| SNF2-related protein [Thermincola sp. JR] gi|296030695|gb|ADG81463.1| SNF2-related protein [Thermincola potens JR] Length = 1084 Score = 35.0 bits (79), Expect = 5.9, Method: Compositional matrix adjust. Identities = 23/92 (25%), Positives = 43/92 (46%), Gaps = 6/92 (6%) Query: 101 IQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 ++ +N G + + G GLNL G +++V F WW+ +E R + G Sbjct: 975 VRAFNAGDGQVFLISLKAGGTGLNLT-GADMVVHFDPWWN-----PAVEDQATDRAYRIG 1028 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTIQD 192 ++ V V+ L+ + TI+E + + K + D Sbjct: 1029 QQQVVQVFKLVTRGTIEEKIFTLQQKKKELID 1060 >gi|254443940|ref|ZP_05057416.1| SNF2 family N-terminal domain protein [Verrucomicrobiae bacterium DG1235] gi|198258248|gb|EDY82556.1| SNF2 family N-terminal domain protein [Verrucomicrobiae bacterium DG1235] Length = 1069 Score = 35.0 bits (79), Expect = 5.9, Method: Compositional matrix adjust. Identities = 24/97 (24%), Positives = 46/97 (47%), Gaps = 7/97 (7%) Query: 91 GRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 G+T +++ Q N+ + + G GLNL + +V + WW+ +E Sbjct: 951 GQTKNREELVDQFQNDETVTAFLLSLRAAGSGLNLT-AASYVVLYDPWWN-----PAVEA 1004 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTK 187 + R + G K V Y LIA++++++ + Q L+ K Sbjct: 1005 QAIDRTHRIGQKNTVNAYRLIAKDSVEQKI-QSLQVK 1040 >gi|193785976|dbj|BAG54763.1| unnamed protein product [Homo sapiens] Length = 827 Score = 35.0 bits (79), Expect = 5.9, Method: Compositional matrix adjust. Identities = 26/86 (30%), Positives = 40/86 (46%), Gaps = 7/86 (8%) Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 G GL ++ VF L+WD +Q +R + G +V ++YLIA T+D L Sbjct: 149 GQGLTFTAASHV-VFAELYWDPGHIKQAEDRA-----HRIGQCSSVNIHYLIANGTLDTL 202 Query: 180 VLQRLRTKSTIQDLLLNALKKETIHV 205 + L K+ + LN +KE I Sbjct: 203 MWGMLNRKAQVTGSTLNG-RKEKIQA 227 >gi|168206269|ref|ZP_02632274.1| putative helicase [Clostridium perfringens E str. JGS1987] gi|170662244|gb|EDT14927.1| putative helicase [Clostridium perfringens E str. JGS1987] Length = 1067 Score = 35.0 bits (79), Expect = 5.9, Method: Composition-based stats. Identities = 39/154 (25%), Positives = 73/154 (47%), Gaps = 20/154 (12%) Query: 55 KIKALEVIIEKANAA--PIIVAYHFNSDLARLQKAFPQ---------GRTLDKDPCTI-Q 102 K+ ++ I++ A+ + I++ F S L ++++ F + G T KD I + Sbjct: 897 KLTVVKEIVKDASESGKKILLFSQFTSVLKKIEEDFKKEDISYLYLDGGTYAKDRVEIVK 956 Query: 103 EWNE-GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGF 161 +NE I + + G GLNL ++++ F WW+ +E R + G Sbjct: 957 NFNEDSNIKVFLISLKAGGVGLNLT-SASVVIHFDPWWN-----PAVEDQATDRAHRFGQ 1010 Query: 162 KRAVFVYYLIAQNTIDE-LVLQRLRTKSTIQDLL 194 + V V L+A++TI+E +VL + + IQ L+ Sbjct: 1011 ENKVEVIKLVAKDTIEEKIVLMQEDKRELIQSLM 1044 >gi|66360055|ref|XP_627205.1| Swr1p like SWI/SNF2 family ATpase with a HSA domain at the N-terminus probably involved in chromatin remodelling [Cryptosporidium parvum Iowa II] gi|46228613|gb|EAK89483.1| Swr1p like SWI/SNF2 family ATpase with a HSA domain at the N-terminus probably involved in chromatin remodelling [Cryptosporidium parvum Iowa II] Length = 1371 Score = 35.0 bits (79), Expect = 5.9, Method: Composition-based stats. Identities = 23/89 (25%), Positives = 47/89 (52%), Gaps = 6/89 (6%) Query: 108 KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFV 167 +I L + S G GLNL G + ++F+ W+ ++R + R + G R V + Sbjct: 1106 RIYLFISSTRSGGVGLNLT-GADTVIFYDSDWN-----PAMDRQAMDRCHRIGQTRDVNI 1159 Query: 168 YYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 Y L+++ TI+E + ++ K + D++++ Sbjct: 1160 YRLVSEWTIEESIFKKQLQKRLLDDVVVD 1188 >gi|238485918|ref|XP_002374197.1| SNF2 family helicase, putative [Aspergillus flavus NRRL3357] gi|220699076|gb|EED55415.1| SNF2 family helicase, putative [Aspergillus flavus NRRL3357] Length = 806 Score = 35.0 bits (79), Expect = 6.0, Method: Compositional matrix adjust. Identities = 22/87 (25%), Positives = 43/87 (49%), Gaps = 8/87 (9%) Query: 102 QEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGF 161 +E + ++ L+ H AS HGL++ + + +W Q +E + R + G Sbjct: 593 REQEDVRVLLMDLHQAS--HGLHIANASRVFIVNPIW------QPNVESQAIKRAHRIGQ 644 Query: 162 KRAVFVYYLIAQNTIDELVLQRLRTKS 188 R VFV L+ + T+++ +L+R + S Sbjct: 645 TRPVFVETLVLKGTLEDKMLERRKAMS 671 >gi|291391484|ref|XP_002712469.1| PREDICTED: zinc finger, RAN-binding domain containing 3 [Oryctolagus cuniculus] Length = 1062 Score = 35.0 bits (79), Expect = 6.0, Method: Compositional matrix adjust. Identities = 24/83 (28%), Positives = 39/83 (46%), Gaps = 6/83 (7%) Query: 118 SCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 + G GL ++ VF L+WD +Q +R + G +V ++YLIA T+D Sbjct: 365 AAGQGLTFTAASHV-VFAELYWDPGHIKQAEDRA-----HRIGQCSSVNIHYLIANGTLD 418 Query: 178 ELVLQRLRTKSTIQDLLLNALKK 200 L+ L K+ + LN K+ Sbjct: 419 TLMWGMLNRKAQVTGSTLNGRKE 441 >gi|229118736|ref|ZP_04248087.1| Helicase, SNF2/RAD54 [Bacillus cereus Rock1-3] gi|228664704|gb|EEL20195.1| Helicase, SNF2/RAD54 [Bacillus cereus Rock1-3] Length = 855 Score = 35.0 bits (79), Expect = 6.0, Method: Compositional matrix adjust. Identities = 23/97 (23%), Positives = 45/97 (46%), Gaps = 6/97 (6%) Query: 101 IQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 I+++ G + + G GLNL N ++ + WW+ +E R + G Sbjct: 747 IEQFQNGTYDIFILSLKAGGTGLNLTA-ANHVIHYDRWWN-----PAVENQATDRAYRIG 800 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 KR V V+ LI T++E + + L K ++ + ++ + Sbjct: 801 QKRFVHVHKLITTGTLEEKIDEMLERKQSLNNAVITS 837 >gi|242214113|ref|XP_002472881.1| predicted protein [Postia placenta Mad-698-R] gi|220728002|gb|EED81905.1| predicted protein [Postia placenta Mad-698-R] Length = 799 Score = 35.0 bits (79), Expect = 6.0, Method: Compositional matrix adjust. Identities = 25/79 (31%), Positives = 38/79 (48%), Gaps = 7/79 (8%) Query: 110 PLLFAHPASCGH-GLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVY 168 P + CG GLNL N L+ L W+ Q +R+ + G ++ VFV Sbjct: 687 PKVILISTKCGGVGLNL-VSANRLINMDLGWNYASESQAYDRV-----HRLGQEKEVFVK 740 Query: 169 YLIAQNTIDELVLQRLRTK 187 L+ +NTI+E +L+ TK Sbjct: 741 RLVVRNTIEERMLKLQETK 759 >gi|309812493|ref|ZP_07706246.1| SNF2 family N-terminal domain protein [Dermacoccus sp. Ellin185] gi|308433548|gb|EFP57427.1| SNF2 family N-terminal domain protein [Dermacoccus sp. Ellin185] Length = 1119 Score = 35.0 bits (79), Expect = 6.1, Method: Composition-based stats. Identities = 24/97 (24%), Positives = 43/97 (44%), Gaps = 6/97 (6%) Query: 101 IQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 + E+ G+ F + G GL L ++V WW+ Q I+R + G Sbjct: 1011 VDEFKSGEADAFFISLKAGGTGLTLTEADYVIVL-DPWWNPAAEDQAIDR-----AHRIG 1064 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + V VY ++ TI+E V++ K + D +++A Sbjct: 1065 QTKHVMVYRYVSAGTIEEKVMELQEKKRKLFDDVVDA 1101 >gi|313238906|emb|CBY13901.1| unnamed protein product [Oikopleura dioica] Length = 769 Score = 35.0 bits (79), Expect = 6.1, Method: Compositional matrix adjust. Identities = 24/82 (29%), Positives = 39/82 (47%), Gaps = 6/82 (7%) Query: 118 SCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 + G GLNLQ +++F S W HQ M + R + G K V V + +++ Sbjct: 359 AGGLGLNLQTADTVIIFDSDW---NPHQDMQAQ---DRAHRIGQKNEVRVLRFVTSQSVE 412 Query: 178 ELVLQRLRTKSTIQDLLLNALK 199 E +L R K T+ + ++ A K Sbjct: 413 ERILAAARYKLTVDEKVIQAGK 434 >gi|327260656|ref|XP_003215150.1| PREDICTED: zinc finger Ran-binding domain-containing protein 3-like [Anolis carolinensis] Length = 1095 Score = 35.0 bits (79), Expect = 6.2, Method: Compositional matrix adjust. Identities = 26/88 (29%), Positives = 41/88 (46%), Gaps = 7/88 (7%) Query: 118 SCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 + G GL ++ VF L+WD +Q +R + G +V ++YLIA T+D Sbjct: 397 AAGQGLTFTAATHV-VFAELYWDPGHIKQAEDRA-----HRIGQCSSVNIHYLIANGTMD 450 Query: 178 ELVLQRLRTKSTIQDLLLNALKKETIHV 205 L+ L K+ + LN KKE + Sbjct: 451 PLMWAMLNRKARVTGTTLNG-KKEKLQA 477 >gi|304406180|ref|ZP_07387837.1| SNF2 helicase associated domain protein [Paenibacillus curdlanolyticus YK9] gi|304344764|gb|EFM10601.1| SNF2 helicase associated domain protein [Paenibacillus curdlanolyticus YK9] Length = 1110 Score = 35.0 bits (79), Expect = 6.2, Method: Compositional matrix adjust. Identities = 21/77 (27%), Positives = 35/77 (45%), Gaps = 6/77 (7%) Query: 102 QEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGF 161 Q +N G+ + + G GLNL + + + +WW+ QQ R + G Sbjct: 1002 QRFNAGEKEVFLISLKAGGTGLNLTGADTV-IMYDMWWNPAVEQQ-----AADRAHRIGQ 1055 Query: 162 KRAVFVYYLIAQNTIDE 178 K V V L+AQ T+++ Sbjct: 1056 KNVVQVIRLVAQGTVED 1072 >gi|229105848|ref|ZP_04236475.1| Helicase, SNF2/RAD54 [Bacillus cereus Rock3-28] gi|228677569|gb|EEL31819.1| Helicase, SNF2/RAD54 [Bacillus cereus Rock3-28] Length = 855 Score = 35.0 bits (79), Expect = 6.2, Method: Compositional matrix adjust. Identities = 23/97 (23%), Positives = 45/97 (46%), Gaps = 6/97 (6%) Query: 101 IQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 I+++ G + + G GLNL N ++ + WW+ +E R + G Sbjct: 747 IEQFQNGTYDIFILSLKAGGTGLNLTA-ANHVIHYDRWWN-----PAVENQATDRAYRIG 800 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 KR V V+ LI T++E + + L K ++ + ++ + Sbjct: 801 QKRFVHVHKLITTGTLEEKIDEMLERKQSLNNAVITS 837 >gi|303318849|ref|XP_003069424.1| HSA family protein [Coccidioides posadasii C735 delta SOWgp] gi|240109110|gb|EER27279.1| HSA family protein [Coccidioides posadasii C735 delta SOWgp] Length = 1415 Score = 35.0 bits (79), Expect = 6.2, Method: Compositional matrix adjust. Identities = 23/82 (28%), Positives = 42/82 (51%), Gaps = 6/82 (7%) Query: 118 SCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 + G GLNLQ ++++ S W HQ + + R + G K V + LI+ N+++ Sbjct: 936 AGGLGLNLQTADTVIIYDSDW---NPHQDLQAQ---DRAHRIGQKNEVRILRLISSNSVE 989 Query: 178 ELVLQRLRTKSTIQDLLLNALK 199 E +L+R + K + ++ A K Sbjct: 990 ERILERAQFKLDMDGKVIQAGK 1011 >gi|320582098|gb|EFW96316.1| helicase of the Snf2/Rad54 family [Pichia angusta DL-1] Length = 972 Score = 35.0 bits (79), Expect = 6.4, Method: Compositional matrix adjust. Identities = 21/86 (24%), Positives = 43/86 (50%), Gaps = 10/86 (11%) Query: 104 WNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLW--WDLEEHQQMIERIGVTRQRQAGF 161 + +P++ + G G+NL N+++F + D ++ + R+G T++ Sbjct: 869 YEADDVPVMLLSTKAGGFGINLVCANNVIIFDQSFNPHDDKQAEDRAHRVGQTKE----- 923 Query: 162 KRAVFVYYLIAQNTIDELVLQRLRTK 187 V VY +I ++TI+E +LQ + K Sbjct: 924 ---VNVYRIICRDTIEENILQLAQNK 946 >gi|299116533|emb|CBN74721.1| SNF2-related domain-containing protein [Ectocarpus siliculosus] Length = 1075 Score = 35.0 bits (79), Expect = 6.4, Method: Composition-based stats. Identities = 25/86 (29%), Positives = 42/86 (48%), Gaps = 10/86 (11%) Query: 111 LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQM--IERIGVTRQRQAGFKRAVFVY 168 L + + G GLNL I++F S W + Q M + R+G T++ V +Y Sbjct: 831 LFYLSTKAGGVGLNLVGANRIVLFDSDWNPATDDQAMARVWRLGQTKE--------VSMY 882 Query: 169 YLIAQNTIDELVLQRLRTKSTIQDLL 194 L++ T++E + QR K + DL+ Sbjct: 883 RLLSTGTLEESIFQRQIFKGALYDLI 908 >gi|229063904|ref|ZP_04200205.1| Helicase, SNF2/RAD54 [Bacillus cereus AH603] gi|229136057|ref|ZP_04264813.1| Helicase, SNF2/RAD54 [Bacillus cereus BDRD-ST196] gi|228647378|gb|EEL03457.1| Helicase, SNF2/RAD54 [Bacillus cereus BDRD-ST196] gi|228716374|gb|EEL68082.1| Helicase, SNF2/RAD54 [Bacillus cereus AH603] Length = 855 Score = 35.0 bits (79), Expect = 6.4, Method: Compositional matrix adjust. Identities = 23/97 (23%), Positives = 45/97 (46%), Gaps = 6/97 (6%) Query: 101 IQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 I+++ G + + G GLNL N ++ + WW+ +E R + G Sbjct: 747 IEQFQNGTYDIFILSLKAGGTGLNLTA-ANHVIHYDRWWN-----PAVENQATDRAYRIG 800 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 KR V V+ LI T++E + + L K ++ + ++ + Sbjct: 801 QKRFVHVHKLITTGTLEEKIDEMLERKQSLNNAVITS 837 >gi|229164183|ref|ZP_04292118.1| Helicase, SNF2/RAD54 [Bacillus cereus R309803] gi|228619300|gb|EEK76191.1| Helicase, SNF2/RAD54 [Bacillus cereus R309803] Length = 840 Score = 35.0 bits (79), Expect = 6.4, Method: Compositional matrix adjust. Identities = 23/97 (23%), Positives = 45/97 (46%), Gaps = 6/97 (6%) Query: 101 IQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 I+++ G + + G GLNL N ++ + WW+ +E R + G Sbjct: 732 IEQFQNGTYDIFILSLKAGGTGLNLTA-ANHVIHYDRWWN-----PAVENQATDRAYRIG 785 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 KR V V+ LI T++E + + L K ++ + ++ + Sbjct: 786 QKRFVHVHKLITTGTLEEKIDEMLERKQSLNNAVITS 822 >gi|255071819|ref|XP_002499584.1| SNF2 super family [Micromonas sp. RCC299] gi|226514846|gb|ACO60842.1| SNF2 super family [Micromonas sp. RCC299] Length = 1271 Score = 35.0 bits (79), Expect = 6.4, Method: Compositional matrix adjust. Identities = 22/73 (30%), Positives = 36/73 (49%), Gaps = 6/73 (8%) Query: 118 SCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 + G GLNLQ +++F S W + QM + R + G KR V + ++ TI+ Sbjct: 899 AGGMGLNLQTADTVIIFDSDW-----NPQM-DAQAEDRAHRIGQKRRVKILTMVCDGTIE 952 Query: 178 ELVLQRLRTKSTI 190 E +L++ K I Sbjct: 953 EDILRKANEKRAI 965 >gi|12853471|dbj|BAB29753.1| unnamed protein product [Mus musculus] Length = 473 Score = 35.0 bits (79), Expect = 6.4, Method: Compositional matrix adjust. Identities = 19/79 (24%), Positives = 39/79 (49%), Gaps = 6/79 (7%) Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 G G+NL +++F S W + Q R + G K+ V +Y L+ + +++E Sbjct: 208 GLGINLASADTVVIFDSDWNPQNDLQ------AQARAHRIGQKKQVNIYRLVTKGSVEED 261 Query: 180 VLQRLRTKSTIQDLLLNAL 198 +L+R + K + L++ + Sbjct: 262 ILERAKKKMVLDHLVIQRM 280 >gi|50288627|ref|XP_446743.1| hypothetical protein [Candida glabrata CBS 138] gi|49526051|emb|CAG59670.1| unnamed protein product [Candida glabrata] Length = 1354 Score = 35.0 bits (79), Expect = 6.4, Method: Compositional matrix adjust. Identities = 23/82 (28%), Positives = 40/82 (48%), Gaps = 6/82 (7%) Query: 118 SCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 + G GLNLQ +++F + W HQ + R + G K V + LI ++++ Sbjct: 852 AGGLGLNLQSADTVIIFDTDW---NPHQDL---QAQDRAHRIGQKNEVRILRLITTDSVE 905 Query: 178 ELVLQRLRTKSTIQDLLLNALK 199 E++L+R K I ++ A K Sbjct: 906 EVILERAMQKLDIDGKVIQAGK 927 >gi|321251541|ref|XP_003192100.1| DNA repair protein RAD16; Rad16p [Cryptococcus gattii WM276] gi|317458568|gb|ADV20313.1| DNA repair protein RAD16; Rad16p [Cryptococcus gattii WM276] Length = 1202 Score = 35.0 bits (79), Expect = 6.4, Method: Compositional matrix adjust. Identities = 24/85 (28%), Positives = 43/85 (50%), Gaps = 8/85 (9%) Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 G GLNL N + WW+ QQ I+R+ + G + V+V I + T+++ Sbjct: 1103 GVGLNLTMA-NYVFLMDTWWNEAIEQQAIDRV-----HRLGQNKPVYVTRYIIKGTVEKR 1156 Query: 180 VLQRLRTKSTIQDLLLN--ALKKET 202 +++ R+K+ + + L+ A KET Sbjct: 1157 IMKIQRSKTALVNASLSKGAKTKET 1181 >gi|229020462|ref|ZP_04177215.1| Helicase, SNF2/RAD54 [Bacillus cereus AH1273] gi|229026691|ref|ZP_04183032.1| Helicase, SNF2/RAD54 [Bacillus cereus AH1272] gi|228734643|gb|EEL85296.1| Helicase, SNF2/RAD54 [Bacillus cereus AH1272] gi|228740838|gb|EEL91083.1| Helicase, SNF2/RAD54 [Bacillus cereus AH1273] Length = 855 Score = 35.0 bits (79), Expect = 6.4, Method: Compositional matrix adjust. Identities = 23/97 (23%), Positives = 45/97 (46%), Gaps = 6/97 (6%) Query: 101 IQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 I+++ G + + G GLNL N ++ + WW+ +E R + G Sbjct: 747 IEQFQNGTYDIFILSLKAGGTGLNLTA-ANHVIHYDRWWN-----PAVENQATDRAYRIG 800 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 KR V V+ LI T++E + + L K ++ + ++ + Sbjct: 801 QKRFVHVHKLITTGTLEEKIDEMLERKQSLNNAVITS 837 >gi|119181968|ref|XP_001242147.1| hypothetical protein CIMG_06043 [Coccidioides immitis RS] Length = 1410 Score = 35.0 bits (79), Expect = 6.4, Method: Compositional matrix adjust. Identities = 23/82 (28%), Positives = 42/82 (51%), Gaps = 6/82 (7%) Query: 118 SCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 + G GLNLQ ++++ S W HQ + + R + G K V + LI+ N+++ Sbjct: 931 AGGLGLNLQTADTVIIYDSDW---NPHQDLQAQ---DRAHRIGQKNEVRILRLISSNSVE 984 Query: 178 ELVLQRLRTKSTIQDLLLNALK 199 E +L+R + K + ++ A K Sbjct: 985 ERILERAQFKLDMDGKVIQAGK 1006 >gi|229099671|ref|ZP_04230598.1| Helicase, SNF2/RAD54 [Bacillus cereus Rock3-29] gi|228683741|gb|EEL37692.1| Helicase, SNF2/RAD54 [Bacillus cereus Rock3-29] Length = 855 Score = 35.0 bits (79), Expect = 6.5, Method: Compositional matrix adjust. Identities = 23/97 (23%), Positives = 45/97 (46%), Gaps = 6/97 (6%) Query: 101 IQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 I+++ G + + G GLNL N ++ + WW+ +E R + G Sbjct: 747 IEQFQNGTYDIFILSLKAGGTGLNLTA-ANHVIHYDRWWN-----PAVENQATDRAYRIG 800 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 KR V V+ LI T++E + + L K ++ + ++ + Sbjct: 801 QKRFVHVHKLITTGTLEEKIDEMLERKQSLNNAVITS 837 >gi|320034578|gb|EFW16522.1| SNF2-family ATP-dependent chromatin remodeling factor snf21 [Coccidioides posadasii str. Silveira] Length = 1410 Score = 35.0 bits (79), Expect = 6.6, Method: Compositional matrix adjust. Identities = 23/82 (28%), Positives = 42/82 (51%), Gaps = 6/82 (7%) Query: 118 SCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 + G GLNLQ ++++ S W HQ + + R + G K V + LI+ N+++ Sbjct: 931 AGGLGLNLQTADTVIIYDSDW---NPHQDLQAQ---DRAHRIGQKNEVRILRLISSNSVE 984 Query: 178 ELVLQRLRTKSTIQDLLLNALK 199 E +L+R + K + ++ A K Sbjct: 985 ERILERAQFKLDMDGKVIQAGK 1006 >gi|290889290|gb|ADD69942.1| chromo-helicase DNA-binding protein [Zonotrichia albicollis] Length = 1785 Score = 35.0 bits (79), Expect = 6.6, Method: Compositional matrix adjust. Identities = 19/79 (24%), Positives = 39/79 (49%), Gaps = 6/79 (7%) Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 G G+NL +++F S W + Q R + G K+ V +Y L+ + +++E Sbjct: 851 GLGINLASADTVVIFDSDWNPQNDLQ------AQARAHRIGQKKQVNIYRLVTKASVEED 904 Query: 180 VLQRLRTKSTIQDLLLNAL 198 +L+R + K + L++ + Sbjct: 905 ILERAKKKMVLDHLVIQRM 923 >gi|229169956|ref|ZP_04297649.1| Helicase, SNF2/RAD54 [Bacillus cereus AH621] gi|228613474|gb|EEK70606.1| Helicase, SNF2/RAD54 [Bacillus cereus AH621] Length = 855 Score = 35.0 bits (79), Expect = 6.6, Method: Compositional matrix adjust. Identities = 23/97 (23%), Positives = 45/97 (46%), Gaps = 6/97 (6%) Query: 101 IQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 I+++ G + + G GLNL N ++ + WW+ +E R + G Sbjct: 747 IEQFQNGTYDIFILSLKAGGTGLNLTA-ANHVIHYDRWWN-----PAVENQATDRAYRIG 800 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 KR V V+ LI T++E + + L K ++ + ++ + Sbjct: 801 QKRFVHVHKLITTGTLEEKIDEMLERKQSLNNAVITS 837 >gi|229076456|ref|ZP_04209418.1| Helicase, SNF2/RAD54 [Bacillus cereus Rock4-18] gi|228706642|gb|EEL58853.1| Helicase, SNF2/RAD54 [Bacillus cereus Rock4-18] Length = 855 Score = 35.0 bits (79), Expect = 6.6, Method: Compositional matrix adjust. Identities = 23/97 (23%), Positives = 45/97 (46%), Gaps = 6/97 (6%) Query: 101 IQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 I+++ G + + G GLNL N ++ + WW+ +E R + G Sbjct: 747 IEQFQNGTYDIFILSLKAGGTGLNLTA-ANHVIHYDRWWN-----PAVENQATDRAYRIG 800 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 KR V V+ LI T++E + + L K ++ + ++ + Sbjct: 801 QKRFVHVHKLITTGTLEEKIDEMLERKQSLNNAVITS 837 >gi|294658800|ref|XP_461131.2| DEHA2F17732p [Debaryomyces hansenii CBS767] gi|202953393|emb|CAG89514.2| DEHA2F17732p [Debaryomyces hansenii] Length = 1295 Score = 35.0 bits (79), Expect = 6.6, Method: Compositional matrix adjust. Identities = 23/82 (28%), Positives = 41/82 (50%), Gaps = 6/82 (7%) Query: 118 SCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 + G GLNLQ +++F + W HQ + + R + G K V + LI ++++ Sbjct: 907 AGGLGLNLQTADTVIIFDTDW---NPHQDLQAQ---DRAHRIGQKNEVRILRLITNDSVE 960 Query: 178 ELVLQRLRTKSTIQDLLLNALK 199 E++L+R K I ++ A K Sbjct: 961 EVILERAHQKLDIDGKVIQAGK 982 >gi|254576891|ref|XP_002494432.1| ZYRO0A01342p [Zygosaccharomyces rouxii] gi|238937321|emb|CAR25499.1| ZYRO0A01342p [Zygosaccharomyces rouxii] Length = 1343 Score = 35.0 bits (79), Expect = 6.7, Method: Compositional matrix adjust. Identities = 23/82 (28%), Positives = 41/82 (50%), Gaps = 6/82 (7%) Query: 118 SCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 + G GLNLQ +++F + W HQ + + R + G K V + LI ++++ Sbjct: 865 AGGLGLNLQSADTVIIFDTDW---NPHQDLQAQ---DRAHRIGQKNEVRILRLITTDSVE 918 Query: 178 ELVLQRLRTKSTIQDLLLNALK 199 E++L+R K I ++ A K Sbjct: 919 EVILERAMQKLDIDGKVIQAGK 940 >gi|156846474|ref|XP_001646124.1| hypothetical protein Kpol_1039p15 [Vanderwaltozyma polyspora DSM 70294] gi|156116797|gb|EDO18266.1| hypothetical protein Kpol_1039p15 [Vanderwaltozyma polyspora DSM 70294] Length = 1385 Score = 35.0 bits (79), Expect = 6.7, Method: Compositional matrix adjust. Identities = 23/82 (28%), Positives = 41/82 (50%), Gaps = 6/82 (7%) Query: 118 SCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 + G GLNLQ +++F + W HQ + + R + G K V + LI ++++ Sbjct: 904 AGGLGLNLQTADTVIIFDTDW---NPHQDLQAQ---DRAHRIGQKNEVRILRLITTDSVE 957 Query: 178 ELVLQRLRTKSTIQDLLLNALK 199 E++L+R K I ++ A K Sbjct: 958 EVILERAMQKLDIDGKVIQAGK 979 >gi|119632036|gb|EAX11631.1| zinc finger, RAN-binding domain containing 3, isoform CRA_c [Homo sapiens] gi|119632038|gb|EAX11633.1| zinc finger, RAN-binding domain containing 3, isoform CRA_c [Homo sapiens] Length = 1019 Score = 35.0 bits (79), Expect = 6.7, Method: Compositional matrix adjust. Identities = 24/84 (28%), Positives = 40/84 (47%), Gaps = 6/84 (7%) Query: 118 SCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 + G GL ++ VF L+WD +Q +R + G +V ++YLIA T+D Sbjct: 339 AAGQGLTFTAASHV-VFAELYWDPGHIKQAEDRA-----HRIGQCSSVNIHYLIANGTLD 392 Query: 178 ELVLQRLRTKSTIQDLLLNALKKE 201 L+ L K+ + LN K++ Sbjct: 393 TLMWGMLNRKAQVTGSTLNGRKEK 416 >gi|83768080|dbj|BAE58219.1| unnamed protein product [Aspergillus oryzae] Length = 1021 Score = 35.0 bits (79), Expect = 6.7, Method: Compositional matrix adjust. Identities = 22/87 (25%), Positives = 43/87 (49%), Gaps = 8/87 (9%) Query: 102 QEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGF 161 +E + ++ L+ H AS HGL++ + + +W Q +E + R + G Sbjct: 808 REQEDVRVLLMDLHQAS--HGLHIANASRVFIVNPIW------QPNVESQAIKRAHRIGQ 859 Query: 162 KRAVFVYYLIAQNTIDELVLQRLRTKS 188 R VFV L+ + T+++ +L+R + S Sbjct: 860 TRPVFVETLVLKGTLEDKMLERRKAMS 886 >gi|297668526|ref|XP_002812483.1| PREDICTED: zinc finger Ran-binding domain-containing protein 3-like [Pongo abelii] Length = 1024 Score = 35.0 bits (79), Expect = 6.7, Method: Compositional matrix adjust. Identities = 24/84 (28%), Positives = 40/84 (47%), Gaps = 6/84 (7%) Query: 118 SCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 + G GL ++ VF L+WD +Q +R + G +V ++YLIA T+D Sbjct: 344 AAGQGLTFTAASHV-VFAELYWDPGHIKQAEDRA-----HRIGQCSSVNIHYLIANGTLD 397 Query: 178 ELVLQRLRTKSTIQDLLLNALKKE 201 L+ L K+ + LN K++ Sbjct: 398 TLMWGMLNRKAQVTGSTLNGRKEK 421 >gi|151943040|gb|EDN61375.1| SNF2-like protein [Saccharomyces cerevisiae YJM789] Length = 1359 Score = 35.0 bits (79), Expect = 6.7, Method: Compositional matrix adjust. Identities = 23/82 (28%), Positives = 41/82 (50%), Gaps = 6/82 (7%) Query: 118 SCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 + G GLNLQ +++F + W HQ + + R + G K V + LI ++++ Sbjct: 869 AGGLGLNLQTADTVIIFDTDW---NPHQDLQAQ---DRAHRIGQKNEVRILRLITTDSVE 922 Query: 178 ELVLQRLRTKSTIQDLLLNALK 199 E++L+R K I ++ A K Sbjct: 923 EVILERAMQKLDIDGKVIQAGK 944 >gi|119632034|gb|EAX11629.1| zinc finger, RAN-binding domain containing 3, isoform CRA_a [Homo sapiens] Length = 1030 Score = 35.0 bits (79), Expect = 6.7, Method: Compositional matrix adjust. Identities = 24/84 (28%), Positives = 40/84 (47%), Gaps = 6/84 (7%) Query: 118 SCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 + G GL ++ VF L+WD +Q +R + G +V ++YLIA T+D Sbjct: 344 AAGQGLTFTAASHV-VFAELYWDPGHIKQAEDRA-----HRIGQCSSVNIHYLIANGTLD 397 Query: 178 ELVLQRLRTKSTIQDLLLNALKKE 201 L+ L K+ + LN K++ Sbjct: 398 TLMWGMLNRKAQVTGSTLNGRKEK 421 >gi|119632040|gb|EAX11635.1| zinc finger, RAN-binding domain containing 3, isoform CRA_f [Homo sapiens] Length = 1017 Score = 35.0 bits (79), Expect = 6.7, Method: Compositional matrix adjust. Identities = 24/84 (28%), Positives = 40/84 (47%), Gaps = 6/84 (7%) Query: 118 SCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 + G GL ++ VF L+WD +Q +R + G +V ++YLIA T+D Sbjct: 339 AAGQGLTFTAASHV-VFAELYWDPGHIKQAEDRA-----HRIGQCSSVNIHYLIANGTLD 392 Query: 178 ELVLQRLRTKSTIQDLLLNALKKE 201 L+ L K+ + LN K++ Sbjct: 393 TLMWGMLNRKAQVTGSTLNGRKEK 416 >gi|109104419|ref|XP_001101449.1| PREDICTED: zinc finger Ran-binding domain-containing protein 3-like, partial [Macaca mulatta] Length = 958 Score = 35.0 bits (79), Expect = 6.7, Method: Compositional matrix adjust. Identities = 24/84 (28%), Positives = 40/84 (47%), Gaps = 6/84 (7%) Query: 118 SCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 + G GL ++ VF L+WD +Q +R + G +V ++YLIA T+D Sbjct: 279 AAGQGLTFTAASHV-VFAELYWDPGHIKQAEDRA-----HRIGQCSSVNIHYLIANGTLD 332 Query: 178 ELVLQRLRTKSTIQDLLLNALKKE 201 L+ L K+ + LN K++ Sbjct: 333 TLMWGMLNRKAQVTGSTLNGRKEK 356 >gi|34559250|gb|AAQ75381.1| global transcription activator Snf2p [Pichia angusta] Length = 1461 Score = 35.0 bits (79), Expect = 6.7, Method: Compositional matrix adjust. Identities = 24/82 (29%), Positives = 40/82 (48%), Gaps = 6/82 (7%) Query: 118 SCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 + G GLNLQ +++F + W HQ + + R + G K V + LI ++I+ Sbjct: 999 AGGLGLNLQTADTVIIFDTDW---NPHQDLQAQ---DRAHRIGQKNEVRILRLITSDSIE 1052 Query: 178 ELVLQRLRTKSTIQDLLLNALK 199 E +L+R K I ++ A K Sbjct: 1053 EYILERAHQKLDIDGKVIQAGK 1074 >gi|50549971|ref|XP_502458.1| YALI0D05775p [Yarrowia lipolytica] gi|49648326|emb|CAG80646.1| YALI0D05775p [Yarrowia lipolytica] Length = 990 Score = 35.0 bits (79), Expect = 6.7, Method: Compositional matrix adjust. Identities = 28/101 (27%), Positives = 47/101 (46%), Gaps = 12/101 (11%) Query: 99 CTIQEWN-EGKIPLLFAHPASCGH-GLNLQYGGNILVFFSLWWDLEEHQQM--IERIGVT 154 I E+N EG +F G G+NL ++++ S W + Q M RIG T Sbjct: 460 AAIDEYNAEGSEKFVFLLTTRAGGLGINLTSADIVILYDSDWNPQADLQAMDRAHRIGQT 519 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 +Q V+V+ + +N ++E VL+R K + L++ Sbjct: 520 KQ--------VYVFRFVTENAVEEKVLERAAQKLRLDQLVI 552 >gi|297848822|ref|XP_002892292.1| hypothetical protein ARALYDRAFT_470549 [Arabidopsis lyrata subsp. lyrata] gi|297338134|gb|EFH68551.1| hypothetical protein ARALYDRAFT_470549 [Arabidopsis lyrata subsp. lyrata] Length = 1406 Score = 35.0 bits (79), Expect = 6.8, Method: Composition-based stats. Identities = 19/77 (24%), Positives = 38/77 (49%), Gaps = 8/77 (10%) Query: 101 IQEWNE--GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQ 158 I E+N+ K + A +C G++L +++ +W +ER ++R + Sbjct: 1259 INEFNDPKSKAKVFLASTKACSEGISLVGASRVILLDVVW------NPAVERQAISRAYR 1312 Query: 159 AGFKRAVFVYYLIAQNT 175 G +R V+ Y+L+A+ T Sbjct: 1313 IGQQRIVYTYHLVAKGT 1329 >gi|254568488|ref|XP_002491354.1| RING finger protein involved in proteolytic control of sumoylated substrates [Pichia pastoris GS115] gi|238031151|emb|CAY69074.1| RING finger protein involved in proteolytic control of sumoylated substrates [Pichia pastoris GS115] gi|328352132|emb|CCA38531.1| Putative DNA helicase ino80 [Pichia pastoris CBS 7435] Length = 1140 Score = 35.0 bits (79), Expect = 6.8, Method: Compositional matrix adjust. Identities = 22/84 (26%), Positives = 41/84 (48%), Gaps = 9/84 (10%) Query: 122 GLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVL 181 GL L +++ W E Q M R + G R VFVY ++ +NT+++ +L Sbjct: 1049 GLTLTCASRVIIMDPFWNPYVEDQAM------DRAHRIGQLREVFVYRMLIKNTVEDRIL 1102 Query: 182 QRLRTKSTIQDLLLNALKKETIHV 205 TK ++++ NAL ++++ Sbjct: 1103 TIQNTK---REIVENALDNQSLNT 1123 >gi|322711493|gb|EFZ03066.1| SNF2 family helicase/ATPase, putative [Metarhizium anisopliae ARSEF 23] Length = 1025 Score = 35.0 bits (79), Expect = 6.9, Method: Composition-based stats. Identities = 29/100 (29%), Positives = 47/100 (47%), Gaps = 7/100 (7%) Query: 101 IQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQA 159 I E+N IP+ + G G+NL +++F D ++ Q + R + Sbjct: 907 IDEFNGNANIPVFLLTTGAGGTGINLTAANKVIIF-----DQSDNPQD-DIQAENRAHRL 960 Query: 160 GFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 G KR V V LIA TI+ELV + + K + + + AL+ Sbjct: 961 GQKRDVEVVRLIASQTIEELVYKACQKKIELANKVTGALE 1000 >gi|222476088|ref|YP_002564609.1| helicase domain protein [Halorubrum lacusprofundi ATCC 49239] gi|222454459|gb|ACM58723.1| helicase domain protein [Halorubrum lacusprofundi ATCC 49239] Length = 969 Score = 35.0 bits (79), Expect = 6.9, Method: Composition-based stats. Identities = 27/85 (31%), Positives = 47/85 (55%), Gaps = 6/85 (7%) Query: 103 EWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFK 162 E+N G+ LLFA A+ G++LQ+ +I+V + L W+ +Q RIG R + G + Sbjct: 529 EFNHGQSRLLFATDAA-SEGIDLQHSCHIMVNYELPWNPNRLEQ---RIG--RLHRYGQE 582 Query: 163 RAVFVYYLIAQNTIDELVLQRLRTK 187 + V V+ ++T + V + L+ K Sbjct: 583 KEVTVWNFSFEDTRESKVFEMLQDK 607 >gi|117646914|emb|CAL37572.1| hypothetical protein [synthetic construct] Length = 1077 Score = 35.0 bits (79), Expect = 6.9, Method: Compositional matrix adjust. Identities = 24/84 (28%), Positives = 40/84 (47%), Gaps = 6/84 (7%) Query: 118 SCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 + G GL ++ VF L+WD +Q +R + G +V ++YLIA T+D Sbjct: 399 AAGQGLTFTAASHV-VFAELYWDPGHIKQAEDRA-----HRIGQCSSVNIHYLIANGTLD 452 Query: 178 ELVLQRLRTKSTIQDLLLNALKKE 201 L+ L K+ + LN K++ Sbjct: 453 TLMWGMLNRKAQVTGSTLNGRKEK 476 >gi|296417472|ref|XP_002838381.1| hypothetical protein [Tuber melanosporum Mel28] gi|295634311|emb|CAZ82572.1| unnamed protein product [Tuber melanosporum] Length = 1069 Score = 35.0 bits (79), Expect = 7.0, Method: Compositional matrix adjust. Identities = 32/111 (28%), Positives = 53/111 (47%), Gaps = 15/111 (13%) Query: 91 GRTLDKDPCT-IQEWNE-GKIPLLFAHPASCGH-GLNLQYGGNILVFFSLWWDLEEHQQM 147 G T +D T I E+N+ G +F G G+NL +I+V + W+ + Q Sbjct: 472 GSTAHEDRITAIDEYNKPGSEKFIFLLTTRAGGLGINLTTA-DIVVLYDSDWNPQADLQA 530 Query: 148 IER---IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 ++R IG T+Q V V+ + +N I+E VL+R K + L++ Sbjct: 531 MDRAHRIGQTKQ--------VMVFRFVTENAIEEKVLERAAQKLRLDQLVI 573 >gi|254582288|ref|XP_002497129.1| ZYRO0D16082p [Zygosaccharomyces rouxii] gi|238940021|emb|CAR28196.1| ZYRO0D16082p [Zygosaccharomyces rouxii] Length = 810 Score = 35.0 bits (79), Expect = 7.0, Method: Compositional matrix adjust. Identities = 25/88 (28%), Positives = 41/88 (46%), Gaps = 11/88 (12%) Query: 118 SCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 + G G+NL +++F S W + Q M R + G V VY L NT++ Sbjct: 639 AAGLGINLAAADTVVLFDSDWNPQVDLQAM------DRCHRIGQTNPVIVYRLCCDNTVE 692 Query: 178 ELVLQRLRTKSTIQDLLL-----NALKK 200 ++L R +K ++ L++ N LKK Sbjct: 693 HVILTRATSKRRLEKLVIQMGQFNTLKK 720 >gi|156098278|ref|XP_001615171.1| helicase [Plasmodium vivax SaI-1] gi|148804045|gb|EDL45444.1| helicase, putative [Plasmodium vivax] Length = 1399 Score = 34.7 bits (78), Expect = 7.1, Method: Compositional matrix adjust. Identities = 25/108 (23%), Positives = 52/108 (48%), Gaps = 9/108 (8%) Query: 91 GRTL-DKDPCTIQEWNE--GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQM 147 G T+ D+ I ++NE K + + G G+NL +++F S ++ Sbjct: 669 GSTVGDERQIRINQFNEPNSKYFIFLLSTRAGGIGINLTTADIVILFDS------DYNPQ 722 Query: 148 IERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 ++ + R + G K+ V VY + QN+++E +++R K + L++ Sbjct: 723 MDIQAMDRAHRIGQKKKVIVYRFVTQNSVEEKIVERAAKKLKLDSLII 770 >gi|117646930|emb|CAL37580.1| hypothetical protein [synthetic construct] Length = 1077 Score = 34.7 bits (78), Expect = 7.1, Method: Compositional matrix adjust. Identities = 24/84 (28%), Positives = 40/84 (47%), Gaps = 6/84 (7%) Query: 118 SCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 + G GL ++ VF L+WD +Q +R + G +V ++YLIA T+D Sbjct: 399 AAGQGLTFTAASHV-VFAELYWDPGHIKQAEDRA-----HRIGQCSSVNIHYLIANGTLD 452 Query: 178 ELVLQRLRTKSTIQDLLLNALKKE 201 L+ L K+ + LN K++ Sbjct: 453 TLMWGMLNRKAQVTGSTLNGRKEK 476 >gi|118343651|ref|NP_001071646.1| chromo-helicase DNA-binding protein [Taeniopygia guttata] gi|28975391|gb|AAO61781.1| chromo-helicase DNA-binding protein [Taeniopygia guttata] gi|28975393|gb|AAO61782.1| chromo-helicase DNA-binding protein [Taeniopygia guttata] Length = 1786 Score = 34.7 bits (78), Expect = 7.1, Method: Compositional matrix adjust. Identities = 19/79 (24%), Positives = 39/79 (49%), Gaps = 6/79 (7%) Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 G G+NL +++F S W + Q R + G K+ V +Y L+ + +++E Sbjct: 850 GLGINLASADTVVIFDSDWNPQNDLQ------AQARAHRIGQKKQVNIYRLVTKASVEED 903 Query: 180 VLQRLRTKSTIQDLLLNAL 198 +L+R + K + L++ + Sbjct: 904 ILERAKKKMVLDHLVIQRM 922 >gi|12855912|dbj|BAB30499.1| unnamed protein product [Mus musculus] Length = 530 Score = 34.7 bits (78), Expect = 7.1, Method: Compositional matrix adjust. Identities = 24/84 (28%), Positives = 40/84 (47%), Gaps = 6/84 (7%) Query: 118 SCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 + G GL ++ VF L+WD +Q +R + G +V ++YLIA T+D Sbjct: 403 AAGQGLTFTAASHV-VFAELYWDPGHIKQAEDR-----AHRIGQCSSVNIHYLIANGTLD 456 Query: 178 ELVLQRLRTKSTIQDLLLNALKKE 201 L+ L K+ + LN K++ Sbjct: 457 SLMWAMLNRKAQVTGSTLNGRKEK 480 >gi|253573733|ref|ZP_04851076.1| non-specific serine/threonine protein kinase [Paenibacillus sp. oral taxon 786 str. D14] gi|251847261|gb|EES75266.1| non-specific serine/threonine protein kinase [Paenibacillus sp. oral taxon 786 str. D14] Length = 1111 Score = 34.7 bits (78), Expect = 7.1, Method: Compositional matrix adjust. Identities = 21/75 (28%), Positives = 35/75 (46%), Gaps = 6/75 (8%) Query: 104 WNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKR 163 +N+G+ L + G GLNL + + + LWW+ QQ R + G K Sbjct: 1005 FNDGERDLFLISLKAGGTGLNLTGADTV-ILYDLWWNPAVEQQ-----AADRAYRIGQKN 1058 Query: 164 AVFVYYLIAQNTIDE 178 V V ++AQ T+++ Sbjct: 1059 IVHVIRMVAQGTVED 1073 >gi|242051170|ref|XP_002463329.1| hypothetical protein SORBIDRAFT_02g041910 [Sorghum bicolor] gi|241926706|gb|EER99850.1| hypothetical protein SORBIDRAFT_02g041910 [Sorghum bicolor] Length = 1685 Score = 34.7 bits (78), Expect = 7.1, Method: Compositional matrix adjust. Identities = 20/84 (23%), Positives = 40/84 (47%), Gaps = 6/84 (7%) Query: 118 SCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 + G G+NL +++F S W + Q M +R + G + V +Y + +++ Sbjct: 944 AGGLGINLATADTVIIFDSDWNPQNDLQAM------SRAHRIGQQETVNIYRFVTCKSVE 997 Query: 178 ELVLQRLRTKSTIQDLLLNALKKE 201 E +L+R + K + L++ L E Sbjct: 998 EDILERAKKKMVLDHLVIQKLNAE 1021 >gi|62860046|ref|NP_115519.2| zinc finger Ran-binding domain-containing protein 3 [Homo sapiens] gi|74741477|sp|Q5FWF4|ZRAB3_HUMAN RecName: Full=Zinc finger Ran-binding domain-containing protein 3 gi|66840172|gb|AAH89429.2| Zinc finger, RAN-binding domain containing 3 [Homo sapiens] Length = 1079 Score = 34.7 bits (78), Expect = 7.1, Method: Compositional matrix adjust. Identities = 24/84 (28%), Positives = 40/84 (47%), Gaps = 6/84 (7%) Query: 118 SCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 + G GL ++ VF L+WD +Q +R + G +V ++YLIA T+D Sbjct: 399 AAGQGLTFTAASHV-VFAELYWDPGHIKQAEDRA-----HRIGQCSSVNIHYLIANGTLD 452 Query: 178 ELVLQRLRTKSTIQDLLLNALKKE 201 L+ L K+ + LN K++ Sbjct: 453 TLMWGMLNRKAQVTGSTLNGRKEK 476 >gi|50310529|ref|XP_455284.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140] gi|49644420|emb|CAG97992.1| KLLA0F04521p [Kluyveromyces lactis] Length = 1344 Score = 34.7 bits (78), Expect = 7.1, Method: Compositional matrix adjust. Identities = 23/82 (28%), Positives = 40/82 (48%), Gaps = 6/82 (7%) Query: 118 SCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 + G GLNLQ +++F + W HQ + R + G K V + LI ++++ Sbjct: 912 AGGLGLNLQTADTVIIFDTDW---NPHQDL---QAQDRAHRIGQKNEVRILRLITTDSVE 965 Query: 178 ELVLQRLRTKSTIQDLLLNALK 199 E++L+R K I ++ A K Sbjct: 966 EVILERAMQKLDIDGKVIQAGK 987 >gi|58258561|ref|XP_566693.1| DNA repair protein RAD5 [Cryptococcus neoformans var. neoformans JEC21] gi|74687780|sp|Q5KPG8|RAD5_CRYNE RecName: Full=DNA repair protein RAD5 gi|57222830|gb|AAW40874.1| DNA repair protein RAD5, putative [Cryptococcus neoformans var. neoformans JEC21] Length = 1198 Score = 34.7 bits (78), Expect = 7.1, Method: Compositional matrix adjust. Identities = 24/85 (28%), Positives = 43/85 (50%), Gaps = 8/85 (9%) Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 G GLNL N + WW+ QQ I+R+ + G + V+V I + T+++ Sbjct: 1099 GVGLNLTMA-NYVFLMDTWWNEAIEQQAIDRV-----HRLGQNKPVYVTRYIIKGTVEKR 1152 Query: 180 VLQRLRTKSTIQDLLLN--ALKKET 202 +++ R+K+ + + L+ A KET Sbjct: 1153 IMKIQRSKTALVNASLSNGAKTKET 1177 >gi|163942929|ref|YP_001647813.1| non-specific serine/threonine protein kinase [Bacillus weihenstephanensis KBAB4] gi|163865126|gb|ABY46185.1| Non-specific serine/threonine protein kinase [Bacillus weihenstephanensis KBAB4] Length = 918 Score = 34.7 bits (78), Expect = 7.1, Method: Compositional matrix adjust. Identities = 23/97 (23%), Positives = 45/97 (46%), Gaps = 6/97 (6%) Query: 101 IQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 I+++ G + + G GLNL N ++ + WW+ +E R + G Sbjct: 810 IEQFQNGTYDIFILSLKAGGTGLNLTA-ANHVIHYDRWWN-----PAVENQATDRAYRIG 863 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 KR V V+ LI T++E + + L K ++ + ++ + Sbjct: 864 QKRFVHVHKLITTGTLEEKIDEMLERKQSLNNAVITS 900 >gi|311272141|ref|XP_003133319.1| PREDICTED: LOW QUALITY PROTEIN: zinc finger Ran-binding domain-containing protein 3-like [Sus scrofa] Length = 1044 Score = 34.7 bits (78), Expect = 7.2, Method: Compositional matrix adjust. Identities = 30/106 (28%), Positives = 48/106 (45%), Gaps = 15/106 (14%) Query: 96 KDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTR 155 KDP E ++ +L A G GL ++ VF L+WD +Q +R Sbjct: 376 KDP-------ETRVAILSIQAA--GQGLTFTAATHV-VFAELYWDPGHIKQAEDRA---- 421 Query: 156 QRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 + G +V ++YLIA T+D L+ L K+ + LN K++ Sbjct: 422 -HRIGQCSSVNIHYLIANGTLDTLMWAMLNRKAQVTGSTLNGRKEK 466 >gi|315048263|ref|XP_003173506.1| hypothetical protein MGYG_03681 [Arthroderma gypseum CBS 118893] gi|311341473|gb|EFR00676.1| hypothetical protein MGYG_03681 [Arthroderma gypseum CBS 118893] Length = 1358 Score = 34.7 bits (78), Expect = 7.3, Method: Compositional matrix adjust. Identities = 23/82 (28%), Positives = 42/82 (51%), Gaps = 6/82 (7%) Query: 118 SCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 + G GLNLQ ++++ S W HQ + + R + G K V + LI+ N+++ Sbjct: 927 AGGLGLNLQTADTVIIYDSDW---NPHQDLQAQ---DRAHRIGQKNEVRILRLISSNSVE 980 Query: 178 ELVLQRLRTKSTIQDLLLNALK 199 E +L+R + K + ++ A K Sbjct: 981 ERILERAQFKLDMDGKVIQAGK 1002 >gi|169620543|ref|XP_001803683.1| hypothetical protein SNOG_13471 [Phaeosphaeria nodorum SN15] gi|160704055|gb|EAT79355.2| hypothetical protein SNOG_13471 [Phaeosphaeria nodorum SN15] Length = 900 Score = 34.7 bits (78), Expect = 7.3, Method: Composition-based stats. Identities = 20/76 (26%), Positives = 37/76 (48%), Gaps = 6/76 (7%) Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 G G+NL +++F S W ++ Q M R + G R V VY +NT+++ Sbjct: 735 GQGINLAAADTVILFDSDWNPQQDLQAM------DRAHRIGQTRNVIVYRFATRNTVEQK 788 Query: 180 VLQRLRTKSTIQDLLL 195 +L+ K ++ L++ Sbjct: 789 LLESAEAKRRLEKLVI 804 >gi|320581785|gb|EFW96004.1| global transcription activator Snf2p [Pichia angusta DL-1] Length = 1461 Score = 34.7 bits (78), Expect = 7.3, Method: Compositional matrix adjust. Identities = 24/82 (29%), Positives = 40/82 (48%), Gaps = 6/82 (7%) Query: 118 SCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 + G GLNLQ +++F + W HQ + + R + G K V + LI ++I+ Sbjct: 999 AGGLGLNLQTADTVIIFDTDW---NPHQDLQAQ---DRAHRIGQKNEVRILRLITSDSIE 1052 Query: 178 ELVLQRLRTKSTIQDLLLNALK 199 E +L+R K I ++ A K Sbjct: 1053 EYILERAHQKLDIDGKVIQAGK 1074 >gi|258572078|ref|XP_002544816.1| SNF2-family ATP dependent chromatin remodeling factor snf21 [Uncinocarpus reesii 1704] gi|237905086|gb|EEP79487.1| SNF2-family ATP dependent chromatin remodeling factor snf21 [Uncinocarpus reesii 1704] Length = 1435 Score = 34.7 bits (78), Expect = 7.3, Method: Compositional matrix adjust. Identities = 23/82 (28%), Positives = 42/82 (51%), Gaps = 6/82 (7%) Query: 118 SCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 + G GLNLQ ++++ S W HQ + + R + G K V + LI+ N+++ Sbjct: 956 AGGLGLNLQTADTVIIYDSDW---NPHQDLQAQ---DRAHRIGQKNEVRILRLISSNSVE 1009 Query: 178 ELVLQRLRTKSTIQDLLLNALK 199 E +L+R + K + ++ A K Sbjct: 1010 ERILERAQFKLDMDGKVIQAGK 1031 >gi|151940802|gb|EDN59189.1| conserved protein [Saccharomyces cerevisiae YJM789] Length = 853 Score = 34.7 bits (78), Expect = 7.3, Method: Compositional matrix adjust. Identities = 25/88 (28%), Positives = 43/88 (48%), Gaps = 11/88 (12%) Query: 118 SCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 + G G+NL G + +V F W+ + Q ++R + G + V VY L NTI+ Sbjct: 681 AAGLGINL-VGADTVVLFDSDWNPQVDLQAMDRC-----HRIGQESPVIVYRLCCDNTIE 734 Query: 178 ELVLQRLRTKSTIQDLLL-----NALKK 200 ++L R K ++ +++ N LKK Sbjct: 735 HVILTRAANKRNLERMVIQMGKFNNLKK 762 >gi|326435151|gb|EGD80721.1| serine/threonine protein kinase [Salpingoeca sp. ATCC 50818] Length = 4337 Score = 34.7 bits (78), Expect = 7.4, Method: Composition-based stats. Identities = 21/75 (28%), Positives = 39/75 (52%), Gaps = 6/75 (8%) Query: 122 GLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVL 181 G+NL + N ++ F + W+ Q I TR + G K V VY L+A+ T+++ + Sbjct: 3877 GINL-HSANRVILFDVDWNPASDNQAI-----TRAHRYGQKLPVVVYRLVARGTLEQRIY 3930 Query: 182 QRLRTKSTIQDLLLN 196 ++ TK + L++ Sbjct: 3931 EKQVTKEVLSQRLVD 3945 >gi|259147128|emb|CAY80381.1| Sth1p [Saccharomyces cerevisiae EC1118] Length = 1359 Score = 34.7 bits (78), Expect = 7.4, Method: Compositional matrix adjust. Identities = 23/82 (28%), Positives = 41/82 (50%), Gaps = 6/82 (7%) Query: 118 SCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 + G GLNLQ +++F + W HQ + + R + G K V + LI ++++ Sbjct: 869 AGGLGLNLQTADTVIIFDTDW---NPHQDLQAQ---DRAHRIGQKNEVRILRLITTDSVE 922 Query: 178 ELVLQRLRTKSTIQDLLLNALK 199 E++L+R K I ++ A K Sbjct: 923 EVILERAMQKLDIDGKVIQAGK 944 >gi|190406337|gb|EDV09604.1| SNF2-family ATP dependent chromatin remodeling factor snf21 [Saccharomyces cerevisiae RM11-1a] Length = 1359 Score = 34.7 bits (78), Expect = 7.4, Method: Compositional matrix adjust. Identities = 23/82 (28%), Positives = 41/82 (50%), Gaps = 6/82 (7%) Query: 118 SCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 + G GLNLQ +++F + W HQ + + R + G K V + LI ++++ Sbjct: 869 AGGLGLNLQTADTVIIFDTDW---NPHQDLQAQ---DRAHRIGQKNEVRILRLITTDSVE 922 Query: 178 ELVLQRLRTKSTIQDLLLNALK 199 E++L+R K I ++ A K Sbjct: 923 EVILERAMQKLDIDGKVIQAGK 944 >gi|115473863|ref|NP_001060530.1| Os07g0660200 [Oryza sativa Japonica Group] gi|113612066|dbj|BAF22444.1| Os07g0660200 [Oryza sativa Japonica Group] Length = 631 Score = 34.7 bits (78), Expect = 7.4, Method: Compositional matrix adjust. Identities = 20/84 (23%), Positives = 40/84 (47%), Gaps = 6/84 (7%) Query: 118 SCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 + G G+NL +++F S W + Q M +R + G + V +Y + +++ Sbjct: 81 AGGLGINLATADTVIIFDSDWNPQNDLQAM------SRAHRIGQQETVNIYRFVTCKSVE 134 Query: 178 ELVLQRLRTKSTIQDLLLNALKKE 201 E +L+R + K + L++ L E Sbjct: 135 EDILERAKKKMVLDHLVIQKLNAE 158 >gi|134106523|ref|XP_778272.1| hypothetical protein CNBA2720 [Cryptococcus neoformans var. neoformans B-3501A] gi|50260975|gb|EAL23625.1| hypothetical protein CNBA2720 [Cryptococcus neoformans var. neoformans B-3501A] Length = 1198 Score = 34.7 bits (78), Expect = 7.4, Method: Compositional matrix adjust. Identities = 24/85 (28%), Positives = 43/85 (50%), Gaps = 8/85 (9%) Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 G GLNL N + WW+ QQ I+R+ + G + V+V I + T+++ Sbjct: 1099 GVGLNLTMA-NYVFLMDTWWNEAIEQQAIDRV-----HRLGQNKPVYVTRYIIKGTVEKR 1152 Query: 180 VLQRLRTKSTIQDLLLN--ALKKET 202 +++ R+K+ + + L+ A KET Sbjct: 1153 IMKIQRSKTALVNASLSNGAKTKET 1177 >gi|302658563|ref|XP_003020983.1| hypothetical protein TRV_04848 [Trichophyton verrucosum HKI 0517] gi|291184858|gb|EFE40365.1| hypothetical protein TRV_04848 [Trichophyton verrucosum HKI 0517] Length = 1362 Score = 34.7 bits (78), Expect = 7.5, Method: Compositional matrix adjust. Identities = 23/82 (28%), Positives = 42/82 (51%), Gaps = 6/82 (7%) Query: 118 SCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 + G GLNLQ ++++ S W HQ + + R + G K V + LI+ N+++ Sbjct: 931 AGGLGLNLQTADTVIIYDSDW---NPHQDLQAQ---DRAHRIGQKNEVRILRLISSNSVE 984 Query: 178 ELVLQRLRTKSTIQDLLLNALK 199 E +L+R + K + ++ A K Sbjct: 985 ERILERAQFKLDMDGKVIQAGK 1006 >gi|256269545|gb|EEU04829.1| Sth1p [Saccharomyces cerevisiae JAY291] Length = 1359 Score = 34.7 bits (78), Expect = 7.5, Method: Compositional matrix adjust. Identities = 23/82 (28%), Positives = 41/82 (50%), Gaps = 6/82 (7%) Query: 118 SCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 + G GLNLQ +++F + W HQ + + R + G K V + LI ++++ Sbjct: 869 AGGLGLNLQTADTVIIFDTDW---NPHQDLQAQ---DRAHRIGQKNEVRILRLITTDSVE 922 Query: 178 ELVLQRLRTKSTIQDLLLNALK 199 E++L+R K I ++ A K Sbjct: 923 EVILERAMQKLDIDGKVIQAGK 944 >gi|6322065|ref|NP_012140.1| Sth1p [Saccharomyces cerevisiae S288c] gi|417373|sp|P32597|STH1_YEAST RecName: Full=Nuclear protein STH1/NPS1; AltName: Full=ATP-dependent helicase STH1; AltName: Full=Chromatin structure-remodeling complex protein STH1; AltName: Full=SNF2 homolog gi|218449|dbj|BAA01446.1| nuclear protein [Saccharomyces cerevisiae] gi|599991|emb|CAA86866.1| nuclear protein [Saccharomyces cerevisiae] gi|285812528|tpg|DAA08427.1| TPA: Sth1p [Saccharomyces cerevisiae S288c] Length = 1359 Score = 34.7 bits (78), Expect = 7.5, Method: Compositional matrix adjust. Identities = 23/82 (28%), Positives = 41/82 (50%), Gaps = 6/82 (7%) Query: 118 SCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 + G GLNLQ +++F + W HQ + + R + G K V + LI ++++ Sbjct: 869 AGGLGLNLQTADTVIIFDTDW---NPHQDLQAQ---DRAHRIGQKNEVRILRLITTDSVE 922 Query: 178 ELVLQRLRTKSTIQDLLLNALK 199 E++L+R K I ++ A K Sbjct: 923 EVILERAMQKLDIDGKVIQAGK 944 >gi|47211143|emb|CAF96563.1| unnamed protein product [Tetraodon nigroviridis] Length = 1919 Score = 34.7 bits (78), Expect = 7.6, Method: Composition-based stats. Identities = 19/79 (24%), Positives = 39/79 (49%), Gaps = 6/79 (7%) Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 G G+NL +++F S W + Q R + G KR V +Y L+ + +++E Sbjct: 895 GLGINLASADTVVIFDSDWNPQNDLQAQ------ARAHRIGQKRQVNIYRLVTKGSVEED 948 Query: 180 VLQRLRTKSTIQDLLLNAL 198 +++R + K + L++ + Sbjct: 949 IIERAKKKMVLDHLVIQRM 967 >gi|323348194|gb|EGA82445.1| Sth1p [Saccharomyces cerevisiae Lalvin QA23] Length = 1359 Score = 34.7 bits (78), Expect = 7.6, Method: Compositional matrix adjust. Identities = 23/82 (28%), Positives = 41/82 (50%), Gaps = 6/82 (7%) Query: 118 SCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 + G GLNLQ +++F + W HQ + + R + G K V + LI ++++ Sbjct: 869 AGGLGLNLQTADTVIIFDTDW---NPHQDLQAQ---DRAHRIGQKNEVRILRLITTDSVE 922 Query: 178 ELVLQRLRTKSTIQDLLLNALK 199 E++L+R K I ++ A K Sbjct: 923 EVILERAMQKLDIDGKVIQAGK 944 >gi|254569936|ref|XP_002492078.1| ATPase component of the RSC chromatin remodeling complex [Pichia pastoris GS115] gi|238031875|emb|CAY69798.1| ATPase component of the RSC chromatin remodeling complex [Pichia pastoris GS115] gi|328351432|emb|CCA37831.1| ATP-dependent helicase STH1/SNF2 [Pichia pastoris CBS 7435] Length = 1239 Score = 34.7 bits (78), Expect = 7.6, Method: Compositional matrix adjust. Identities = 23/82 (28%), Positives = 41/82 (50%), Gaps = 6/82 (7%) Query: 118 SCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 + G GLNLQ +++F + W HQ + + R + G K V + LI ++++ Sbjct: 864 AGGLGLNLQTADTVIIFDTDW---NPHQDLQAQ---DRAHRIGQKNEVRILRLITTDSVE 917 Query: 178 ELVLQRLRTKSTIQDLLLNALK 199 E++L+R K I ++ A K Sbjct: 918 EVILERAHQKLDIDGKVIQAGK 939 >gi|150866895|ref|XP_001386641.2| Nuclear protein STH1/NPS1 (Chromatin structure remodeling complex protein STH1) (SNF2 homolog) [Scheffersomyces stipitis CBS 6054] gi|149388151|gb|ABN68612.2| Nuclear protein STH1/NPS1 (Chromatin structure remodeling complex protein STH1) (SNF2 homolog) [Scheffersomyces stipitis CBS 6054] Length = 1259 Score = 34.7 bits (78), Expect = 7.6, Method: Compositional matrix adjust. Identities = 23/82 (28%), Positives = 41/82 (50%), Gaps = 6/82 (7%) Query: 118 SCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 + G GLNLQ +++F + W HQ + + R + G K V + LI ++++ Sbjct: 877 AGGLGLNLQTADTVIIFDTDW---NPHQDLQAQ---DRAHRIGQKNEVRILRLITNDSVE 930 Query: 178 ELVLQRLRTKSTIQDLLLNALK 199 E++L+R K I ++ A K Sbjct: 931 EVILERAHQKLDIDGKVIQAGK 952 >gi|172764|gb|AAA35120.1| STH1 protein [Saccharomyces cerevisiae] Length = 1352 Score = 34.7 bits (78), Expect = 7.6, Method: Compositional matrix adjust. Identities = 23/82 (28%), Positives = 41/82 (50%), Gaps = 6/82 (7%) Query: 118 SCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 + G GLNLQ +++F + W HQ + + R + G K V + LI ++++ Sbjct: 869 AGGLGLNLQTADTVIIFDTDW---NPHQDLQAQ---DRAHRIGQKNEVRILRLITTDSVE 922 Query: 178 ELVLQRLRTKSTIQDLLLNALK 199 E++L+R K I ++ A K Sbjct: 923 EVILERAMQKLDIDGKVIQAGK 944 >gi|326479975|gb|EGE03985.1| SNF2-family ATP dependent chromatin remodeling factor snf21 [Trichophyton equinum CBS 127.97] Length = 1352 Score = 34.7 bits (78), Expect = 7.7, Method: Compositional matrix adjust. Identities = 23/82 (28%), Positives = 42/82 (51%), Gaps = 6/82 (7%) Query: 118 SCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 + G GLNLQ ++++ S W HQ + + R + G K V + LI+ N+++ Sbjct: 921 AGGLGLNLQTADTVIIYDSDW---NPHQDLQAQ---DRAHRIGQKNEVRILRLISSNSVE 974 Query: 178 ELVLQRLRTKSTIQDLLLNALK 199 E +L+R + K + ++ A K Sbjct: 975 ERILERAQFKLDMDGKVIQAGK 996 >gi|300121515|emb|CBK22034.2| unnamed protein product [Blastocystis hominis] Length = 508 Score = 34.7 bits (78), Expect = 7.8, Method: Compositional matrix adjust. Identities = 48/206 (23%), Positives = 80/206 (38%), Gaps = 33/206 (16%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKC---LQLANGA--VYYDEEKHWKEVHDEKI 56 K+ ++F+R +CDL S S+ + QL + VY ++ + DE I Sbjct: 284 KELYRFER--WCDLGMTLSARLMSTSRNFRMQILRQLVSHPYNVYEEKSSSGSYITDESI 341 Query: 57 -----------KALEVIIEKANAAPIIVAY----HFNSDLARL---QKAFPQGRTL--DK 96 L+V+I K + + V + H D + G TL D+ Sbjct: 342 IQKSSKLTLLDNLLKVLIPKGHRVLVFVQFVETLHLLEDYCTFRGYENCSIHGSTLQSDR 401 Query: 97 DPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 D + IP+ S G G+NL ++++ S W ++ Q M R Sbjct: 402 DQEIKDFQSREDIPIFLLTTRSGGLGINLSAADTVILYDSDWNPQQDIQAM------DRA 455 Query: 157 RQAGFKRAVFVYYLIAQNTIDELVLQ 182 + G KR V VY + T+D +L+ Sbjct: 456 HRLGQKRDVVVYRFVTLGTMDVQLLK 481 >gi|229008128|ref|ZP_04165659.1| Helicase, SNF2/RAD54 [Bacillus mycoides Rock1-4] gi|228753134|gb|EEM02641.1| Helicase, SNF2/RAD54 [Bacillus mycoides Rock1-4] Length = 867 Score = 34.7 bits (78), Expect = 7.8, Method: Compositional matrix adjust. Identities = 23/97 (23%), Positives = 44/97 (45%), Gaps = 6/97 (6%) Query: 101 IQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 I+++ G + + G GLNL N ++ + WW+ +E R + G Sbjct: 759 IEQFQNGTYDIFILSLKAGGTGLNLTA-ANHVIHYDRWWN-----PAVENQATDRAYRIG 812 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 KR V V+ LI T++E + + L K ++ ++ + Sbjct: 813 QKRFVHVHKLITTGTLEEKIDEMLERKQSLSSAIITS 849 >gi|222637616|gb|EEE67748.1| hypothetical protein OsJ_25446 [Oryza sativa Japonica Group] Length = 1734 Score = 34.7 bits (78), Expect = 7.8, Method: Compositional matrix adjust. Identities = 20/84 (23%), Positives = 40/84 (47%), Gaps = 6/84 (7%) Query: 118 SCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 + G G+NL +++F S W + Q M +R + G + V +Y + +++ Sbjct: 990 AGGLGINLATADTVIIFDSDWNPQNDLQAM------SRAHRIGQQETVNIYRFVTCKSVE 1043 Query: 178 ELVLQRLRTKSTIQDLLLNALKKE 201 E +L+R + K + L++ L E Sbjct: 1044 EDILERAKKKMVLDHLVIQKLNAE 1067 >gi|326468544|gb|EGD92553.1| SNF2 family ATP dependent chromatin remodeling factor snf21 [Trichophyton tonsurans CBS 112818] Length = 1352 Score = 34.7 bits (78), Expect = 7.8, Method: Compositional matrix adjust. Identities = 23/82 (28%), Positives = 42/82 (51%), Gaps = 6/82 (7%) Query: 118 SCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 + G GLNLQ ++++ S W HQ + + R + G K V + LI+ N+++ Sbjct: 921 AGGLGLNLQTADTVIIYDSDW---NPHQDLQAQ---DRAHRIGQKNEVRILRLISSNSVE 974 Query: 178 ELVLQRLRTKSTIQDLLLNALK 199 E +L+R + K + ++ A K Sbjct: 975 ERILERAQFKLDMDGKVIQAGK 996 >gi|302510453|ref|XP_003017178.1| hypothetical protein ARB_04055 [Arthroderma benhamiae CBS 112371] gi|291180749|gb|EFE36533.1| hypothetical protein ARB_04055 [Arthroderma benhamiae CBS 112371] Length = 1405 Score = 34.7 bits (78), Expect = 7.8, Method: Compositional matrix adjust. Identities = 23/82 (28%), Positives = 42/82 (51%), Gaps = 6/82 (7%) Query: 118 SCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 + G GLNLQ ++++ S W HQ + + R + G K V + LI+ N+++ Sbjct: 974 AGGLGLNLQTADTVIIYDSDW---NPHQDLQAQ---DRAHRIGQKNEVRILRLISSNSVE 1027 Query: 178 ELVLQRLRTKSTIQDLLLNALK 199 E +L+R + K + ++ A K Sbjct: 1028 ERILERAQFKLDMDGKVIQAGK 1049 >gi|228994365|ref|ZP_04154249.1| Helicase, SNF2/RAD54 [Bacillus pseudomycoides DSM 12442] gi|228765382|gb|EEM14052.1| Helicase, SNF2/RAD54 [Bacillus pseudomycoides DSM 12442] Length = 867 Score = 34.7 bits (78), Expect = 7.8, Method: Compositional matrix adjust. Identities = 23/97 (23%), Positives = 44/97 (45%), Gaps = 6/97 (6%) Query: 101 IQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 I+++ G + + G GLNL N ++ + WW+ +E R + G Sbjct: 759 IEQFQNGTYDIFILSLKAGGTGLNLTA-ANHVIHYDRWWN-----PAVENQATDRAYRIG 812 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 KR V V+ LI T++E + + L K ++ ++ + Sbjct: 813 QKRFVHVHKLITTGTLEEKIDEMLERKQSLSSAIITS 849 >gi|228999987|ref|ZP_04159559.1| Helicase, SNF2/RAD54 [Bacillus mycoides Rock3-17] gi|228759929|gb|EEM08903.1| Helicase, SNF2/RAD54 [Bacillus mycoides Rock3-17] Length = 867 Score = 34.7 bits (78), Expect = 7.8, Method: Compositional matrix adjust. Identities = 23/97 (23%), Positives = 44/97 (45%), Gaps = 6/97 (6%) Query: 101 IQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 I+++ G + + G GLNL N ++ + WW+ +E R + G Sbjct: 759 IEQFQNGTYDIFILSLKAGGTGLNLTA-ANHVIHYDRWWN-----PAVENQATDRAYRIG 812 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 KR V V+ LI T++E + + L K ++ ++ + Sbjct: 813 QKRFVHVHKLITTGTLEEKIDEMLERKQSLSSAIITS 849 >gi|218200191|gb|EEC82618.1| hypothetical protein OsI_27196 [Oryza sativa Indica Group] Length = 1734 Score = 34.7 bits (78), Expect = 7.8, Method: Compositional matrix adjust. Identities = 20/84 (23%), Positives = 40/84 (47%), Gaps = 6/84 (7%) Query: 118 SCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 + G G+NL +++F S W + Q M +R + G + V +Y + +++ Sbjct: 990 AGGLGINLATADTVIIFDSDWNPQNDLQAM------SRAHRIGQQETVNIYRFVTCKSVE 1043 Query: 178 ELVLQRLRTKSTIQDLLLNALKKE 201 E +L+R + K + L++ L E Sbjct: 1044 EDILERAKKKMVLDHLVIQKLNAE 1067 >gi|836793|dbj|BAA09277.1| unnamed protein product [Saccharomyces cerevisiae] Length = 778 Score = 34.7 bits (78), Expect = 7.8, Method: Compositional matrix adjust. Identities = 25/88 (28%), Positives = 43/88 (48%), Gaps = 11/88 (12%) Query: 118 SCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 + G G+NL G + +V F W+ + Q ++R + G + V VY L NTI+ Sbjct: 681 AAGLGINL-VGADTVVLFDSDWNPQVDLQAMDRC-----HRIGQESPVIVYRLCCDNTIE 734 Query: 178 ELVLQRLRTKSTIQDLLL-----NALKK 200 ++L R K ++ +++ N LKK Sbjct: 735 HVILTRAANKRNLERMVIQMGKFNNLKK 762 >gi|212534786|ref|XP_002147549.1| SNF2 family helicase/ATPase, putative [Penicillium marneffei ATCC 18224] gi|210069948|gb|EEA24038.1| SNF2 family helicase/ATPase, putative [Penicillium marneffei ATCC 18224] Length = 1115 Score = 34.7 bits (78), Expect = 7.9, Method: Compositional matrix adjust. Identities = 27/99 (27%), Positives = 47/99 (47%), Gaps = 8/99 (8%) Query: 99 CTIQEWN-EGKIPLLFAHPASCGH-GLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 I E+N EG +F G G+NL +I+V F W+ + Q ++R Sbjct: 547 AAIDEYNKEGSDKFIFLLTTRAGGLGINLTTA-DIVVLFDSDWNPQADLQAMDRA----- 600 Query: 157 RQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 + G K+ V V+ + ++ I+E VL+R K + L++ Sbjct: 601 HRIGQKKQVVVFRFVTEHAIEEKVLERAAQKLRLDQLVI 639 >gi|71064092|gb|AAZ22501.1| Sth1p [Saccharomyces cerevisiae] Length = 1359 Score = 34.7 bits (78), Expect = 7.9, Method: Compositional matrix adjust. Identities = 23/82 (28%), Positives = 41/82 (50%), Gaps = 6/82 (7%) Query: 118 SCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 + G GLNLQ +++F + W HQ + + R + G K V + LI ++++ Sbjct: 869 AGGLGLNLQTADTVIIFDTDW---NPHQDLQAQ---DRAHRIGQKNEVRILRLITTDSVE 922 Query: 178 ELVLQRLRTKSTIQDLLLNALK 199 E++L+R K I ++ A K Sbjct: 923 EVILERAMQKLDIDGKVIQAGK 944 >gi|42742173|ref|NP_116696.2| Irc5p [Saccharomyces cerevisiae S288c] gi|84028283|sp|P43610|IRC5_YEAST RecName: Full=Uncharacterized ATP-dependent helicase IRC5; AltName: Full=Increased recombination centers protein 5 gi|285811936|tpg|DAA12481.1| TPA: Irc5p [Saccharomyces cerevisiae S288c] Length = 853 Score = 34.7 bits (78), Expect = 7.9, Method: Compositional matrix adjust. Identities = 25/88 (28%), Positives = 43/88 (48%), Gaps = 11/88 (12%) Query: 118 SCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 + G G+NL G + +V F W+ + Q ++R + G + V VY L NTI+ Sbjct: 681 AAGLGINL-VGADTVVLFDSDWNPQVDLQAMDRC-----HRIGQESPVIVYRLCCDNTIE 734 Query: 178 ELVLQRLRTKSTIQDLLL-----NALKK 200 ++L R K ++ +++ N LKK Sbjct: 735 HVILTRAANKRNLERMVIQMGKFNNLKK 762 >gi|186686080|ref|YP_001869276.1| SNF2-related protein [Nostoc punctiforme PCC 73102] gi|186468532|gb|ACC84333.1| SNF2-related protein [Nostoc punctiforme PCC 73102] Length = 1403 Score = 34.7 bits (78), Expect = 7.9, Method: Compositional matrix adjust. Identities = 22/78 (28%), Positives = 38/78 (48%), Gaps = 6/78 (7%) Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 G GLNL + ++ WW+ +E R + G +R V +Y L+A++TI+E Sbjct: 1313 GTGLNLT-AADYVIHTDPWWN-----PAVEDQASDRAHRIGQQRPVTIYRLVAKDTIEEK 1366 Query: 180 VLQRLRTKSTIQDLLLNA 197 +++ K + D LL Sbjct: 1367 IVELHHHKRDLADSLLEG 1384 >gi|297741672|emb|CBI32804.3| unnamed protein product [Vitis vinifera] Length = 819 Score = 34.7 bits (78), Expect = 8.0, Method: Compositional matrix adjust. Identities = 21/75 (28%), Positives = 38/75 (50%), Gaps = 6/75 (8%) Query: 108 KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFV 167 K +L A + G G+NL + + WW+ +Q ++R+ + G K V + Sbjct: 710 KAAVLLASLKASGAGINLTAASRVYLL-EPWWNPAVEEQAMDRV-----HRIGQKEDVKI 763 Query: 168 YYLIAQNTIDELVLQ 182 LIA+N+I+E +L+ Sbjct: 764 VRLIARNSIEERILE 778 >gi|238624120|ref|NP_001121770.2| chromodomain helicase DNA binding protein 1 [Danio rerio] Length = 1693 Score = 34.7 bits (78), Expect = 8.0, Method: Compositional matrix adjust. Identities = 18/79 (22%), Positives = 39/79 (49%), Gaps = 6/79 (7%) Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 G G+NL +++F S W + Q R + G K+ V +Y L+ + +++E Sbjct: 855 GLGINLASADTVVIFDSDWNPQNDLQ------AQARAHRIGQKKQVNIYRLVTKGSVEEE 908 Query: 180 VLQRLRTKSTIQDLLLNAL 198 +++R + K + L++ + Sbjct: 909 IIERAKKKMVLDHLVIQRM 927 >gi|327300573|ref|XP_003234979.1| RSC complex subunit Sth1 [Trichophyton rubrum CBS 118892] gi|326462331|gb|EGD87784.1| RSC complex subunit Sth1 [Trichophyton rubrum CBS 118892] Length = 1352 Score = 34.7 bits (78), Expect = 8.0, Method: Compositional matrix adjust. Identities = 23/82 (28%), Positives = 42/82 (51%), Gaps = 6/82 (7%) Query: 118 SCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 + G GLNLQ ++++ S W HQ + + R + G K V + LI+ N+++ Sbjct: 921 AGGLGLNLQTADTVIIYDSDW---NPHQDLQAQ---DRAHRIGQKNEVRILRLISSNSVE 974 Query: 178 ELVLQRLRTKSTIQDLLLNALK 199 E +L+R + K + ++ A K Sbjct: 975 ERILERAQFKLDMDGKVIQAGK 996 >gi|83286649|ref|XP_730253.1| hypothetical protein [Plasmodium yoelii yoelii str. 17XNL] gi|23489925|gb|EAA21818.1| SNF2 family N-terminal domain, putative [Plasmodium yoelii yoelii] Length = 1350 Score = 34.7 bits (78), Expect = 8.0, Method: Compositional matrix adjust. Identities = 25/108 (23%), Positives = 52/108 (48%), Gaps = 9/108 (8%) Query: 91 GRTL-DKDPCTIQEWNE--GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQM 147 G T+ D+ I ++NE K + + G G+NL +++F S ++ Sbjct: 596 GSTVGDERQIRINKFNEPNSKYFIFLLSTRAGGIGINLTTADIVILFDS------DYNPQ 649 Query: 148 IERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 ++ + R + G K+ V VY + QN+++E +++R K + L++ Sbjct: 650 MDIQAMDRAHRIGQKKRVIVYRFVTQNSVEEKIVERAAKKLKLDSLII 697 >gi|255710645|ref|XP_002551606.1| KLTH0A03410p [Lachancea thermotolerans] gi|238932983|emb|CAR21164.1| KLTH0A03410p [Lachancea thermotolerans] Length = 806 Score = 34.7 bits (78), Expect = 8.1, Method: Compositional matrix adjust. Identities = 18/76 (23%), Positives = 37/76 (48%), Gaps = 6/76 (7%) Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 G G+NL +++F S W ++ + R + G + V VY L NT++ + Sbjct: 641 GLGINLTAADTVVLFDSDW------NPQVDLQAMDRTHRIGQTKPVIVYRLCCDNTVEHV 694 Query: 180 VLQRLRTKSTIQDLLL 195 +L R +K ++ +++ Sbjct: 695 ILTRAASKRKLEKMVI 710 >gi|300175571|emb|CBK20882.2| unnamed protein product [Blastocystis hominis] Length = 571 Score = 34.7 bits (78), Expect = 8.2, Method: Compositional matrix adjust. Identities = 22/77 (28%), Positives = 36/77 (46%), Gaps = 6/77 (7%) Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 G GLN+ +++ W I+ + R + G R VFVY L +I+E+ Sbjct: 413 GVGLNITGASRVVMLEPAW------NPAIDLQSIARAWRFGQTRRVFVYRLFVAGSIEEV 466 Query: 180 VLQRLRTKSTIQDLLLN 196 +LQR K I D+ ++ Sbjct: 467 MLQRQLLKKAIADVAVD 483 >gi|251797976|ref|YP_003012707.1| SNF2-related protein [Paenibacillus sp. JDR-2] gi|247545602|gb|ACT02621.1| SNF2-related protein [Paenibacillus sp. JDR-2] Length = 589 Score = 34.7 bits (78), Expect = 8.2, Method: Compositional matrix adjust. Identities = 28/92 (30%), Positives = 46/92 (50%), Gaps = 7/92 (7%) Query: 107 GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVF 166 G+ +L A A G G+NLQ+ N ++ F L W+ +Q I R+ + G K V Sbjct: 429 GRAQVLIATEAG-GEGINLQFCHN-MINFDLPWNPMRVEQRIGRV-----HRLGQKEDVK 481 Query: 167 VYYLIAQNTIDELVLQRLRTKSTIQDLLLNAL 198 +Y L TI+E ++ L K + +L++ L Sbjct: 482 IYNLCTLGTIEEHIVNLLHEKINLFELVIGEL 513 >gi|190406613|gb|EDV09880.1| conserved hypothetical protein [Saccharomyces cerevisiae RM11-1a] Length = 853 Score = 34.7 bits (78), Expect = 8.2, Method: Compositional matrix adjust. Identities = 25/88 (28%), Positives = 43/88 (48%), Gaps = 11/88 (12%) Query: 118 SCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 + G G+NL G + +V F W+ + Q ++R + G + V VY L NTI+ Sbjct: 681 AAGLGINL-VGADTVVLFDSDWNPQVDLQAMDRC-----HRIGQESPVIVYRLCCDNTIE 734 Query: 178 ELVLQRLRTKSTIQDLLL-----NALKK 200 ++L R K ++ +++ N LKK Sbjct: 735 HVILTRAANKRNLERMVIQMGKFNNLKK 762 >gi|207345617|gb|EDZ72381.1| YFR038Wp-like protein [Saccharomyces cerevisiae AWRI1631] Length = 853 Score = 34.7 bits (78), Expect = 8.2, Method: Compositional matrix adjust. Identities = 25/88 (28%), Positives = 43/88 (48%), Gaps = 11/88 (12%) Query: 118 SCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 + G G+NL G + +V F W+ + Q ++R + G + V VY L NTI+ Sbjct: 681 AAGLGINL-VGADTVVLFDSDWNPQVDLQAMDRC-----HRIGQESPVIVYRLCCDNTIE 734 Query: 178 ELVLQRLRTKSTIQDLLL-----NALKK 200 ++L R K ++ +++ N LKK Sbjct: 735 HVILTRAANKRNLERMVIQMGKFNNLKK 762 >gi|168216008|ref|ZP_02641633.1| putative helicase [Clostridium perfringens NCTC 8239] gi|182381656|gb|EDT79135.1| putative helicase [Clostridium perfringens NCTC 8239] Length = 1065 Score = 34.7 bits (78), Expect = 8.2, Method: Composition-based stats. Identities = 38/154 (24%), Positives = 74/154 (48%), Gaps = 20/154 (12%) Query: 55 KIKALEVIIEKANAA--PIIVAYHFNSDLARLQKAFPQ---------GRTLDKDPCT-IQ 102 K+ ++ I++ A+ + I++ F S L ++++ F + G T KD ++ Sbjct: 895 KLTVVKEIVKDASESGKKILLFSQFTSVLQKIEEDFKKEDISYLYLDGGTSAKDRVERVK 954 Query: 103 EWNE-GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGF 161 ++NE I + + G GLNL ++++ F WW+ +E R + G Sbjct: 955 KFNEDSNIKVFLISLKAGGVGLNLT-SASVVIHFDPWWN-----PAVEDQATDRAHRFGQ 1008 Query: 162 KRAVFVYYLIAQNTIDE-LVLQRLRTKSTIQDLL 194 + V V L+A++TI+E +VL + + IQ L+ Sbjct: 1009 ENKVEVIKLVAKDTIEEKIVLMQEDKRELIQSLM 1042 >gi|311742523|ref|ZP_07716332.1| ATP-dependent RNA helicase [Aeromicrobium marinum DSM 15272] gi|311314151|gb|EFQ84059.1| ATP-dependent RNA helicase [Aeromicrobium marinum DSM 15272] Length = 710 Score = 34.7 bits (78), Expect = 8.3, Method: Composition-based stats. Identities = 24/85 (28%), Positives = 41/85 (48%), Gaps = 6/85 (7%) Query: 117 ASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTI 176 ++ G GLNL NI V L W E Q I+R+ + G + V + +IA TI Sbjct: 607 SAAGVGLNLHVASNI-VLAELSWTDAEQTQAIDRV-----HRIGQEEPVTAWRIIAAQTI 660 Query: 177 DELVLQRLRTKSTIQDLLLNALKKE 201 D +++ + +K+ + L+ +E Sbjct: 661 DTKIVELIDSKAGLAARALDGSDEE 685 >gi|256268827|gb|EEU04181.1| Irc5p [Saccharomyces cerevisiae JAY291] Length = 853 Score = 34.7 bits (78), Expect = 8.3, Method: Compositional matrix adjust. Identities = 25/88 (28%), Positives = 43/88 (48%), Gaps = 11/88 (12%) Query: 118 SCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 + G G+NL G + +V F W+ + Q ++R + G + V VY L NTI+ Sbjct: 681 AAGLGINL-VGADTVVLFDSDWNPQVDLQAMDRC-----HRIGQESPVIVYRLCCDNTIE 734 Query: 178 ELVLQRLRTKSTIQDLLL-----NALKK 200 ++L R K ++ +++ N LKK Sbjct: 735 HVILTRAANKRNLERMVIQMGKFNNLKK 762 >gi|169343905|ref|ZP_02864901.1| putative helicase [Clostridium perfringens C str. JGS1495] gi|169298025|gb|EDS80116.1| putative helicase [Clostridium perfringens C str. JGS1495] Length = 1065 Score = 34.7 bits (78), Expect = 8.3, Method: Composition-based stats. Identities = 38/154 (24%), Positives = 73/154 (47%), Gaps = 20/154 (12%) Query: 55 KIKALEVIIEKANAA--PIIVAYHFNSDLARLQKAFPQ---------GRTLDKDPCT-IQ 102 K+ ++ I++ A+ + I++ F S L ++++ F + G T KD ++ Sbjct: 895 KLTVVKEIVKDASESGKKILLFSQFTSVLKKIEEDFKKEDISYLYLDGGTSAKDRVERVK 954 Query: 103 EWNE-GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGF 161 +NE I + + G GLNL ++++ F WW+ +E R + G Sbjct: 955 RFNEDSNIKVFLISLKAGGVGLNLT-SASVVIHFDPWWN-----PAVEEQATDRAHRFGQ 1008 Query: 162 KRAVFVYYLIAQNTIDE-LVLQRLRTKSTIQDLL 194 + V V L+A++TI+E +VL + + IQ L+ Sbjct: 1009 ENKVEVIKLVAKDTIEEKIVLMQEDKRELIQSLM 1042 >gi|229087719|ref|ZP_04219842.1| Helicase, SNF2/RAD54 [Bacillus cereus Rock3-44] gi|228695554|gb|EEL48416.1| Helicase, SNF2/RAD54 [Bacillus cereus Rock3-44] Length = 858 Score = 34.7 bits (78), Expect = 8.4, Method: Compositional matrix adjust. Identities = 23/97 (23%), Positives = 44/97 (45%), Gaps = 6/97 (6%) Query: 101 IQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 I+++ G + + G GLNL N ++ + WW+ +E R + G Sbjct: 750 IEQFQNGTYDIFILSLKAGGTGLNLTA-ANHVIHYDRWWN-----PAVENQATDRAYRIG 803 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 KR V V+ LI T++E + + L K ++ ++ + Sbjct: 804 QKRFVHVHKLITTGTLEEKIDEMLERKQSLSSAIITS 840 >gi|207344407|gb|EDZ71563.1| YIL126Wp-like protein [Saccharomyces cerevisiae AWRI1631] Length = 1358 Score = 34.7 bits (78), Expect = 8.4, Method: Compositional matrix adjust. Identities = 23/82 (28%), Positives = 41/82 (50%), Gaps = 6/82 (7%) Query: 118 SCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 + G GLNLQ +++F + W HQ + + R + G K V + LI ++++ Sbjct: 868 AGGLGLNLQTADTVIIFDTDW---NPHQDLQAQ---DRAHRIGQKNEVRILRLITTDSVE 921 Query: 178 ELVLQRLRTKSTIQDLLLNALK 199 E++L+R K I ++ A K Sbjct: 922 EVILERAMQKLDIDGKVIQAGK 943 >gi|296204912|ref|XP_002749531.1| PREDICTED: zinc finger Ran-binding domain-containing protein 3 [Callithrix jacchus] Length = 1080 Score = 34.7 bits (78), Expect = 8.4, Method: Compositional matrix adjust. Identities = 24/84 (28%), Positives = 40/84 (47%), Gaps = 6/84 (7%) Query: 118 SCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 + G GL ++ VF L+WD +Q +R + G +V ++YLIA T+D Sbjct: 399 AAGQGLTFTAASHV-VFAELYWDPGHIKQAEDRA-----HRIGQCSSVNIHYLIANGTLD 452 Query: 178 ELVLQRLRTKSTIQDLLLNALKKE 201 L+ L K+ + LN K++ Sbjct: 453 TLMWGMLNRKAQVTGSTLNGRKEK 476 >gi|171913352|ref|ZP_02928822.1| Non-specific serine/threonine protein kinase [Verrucomicrobium spinosum DSM 4136] Length = 1140 Score = 34.7 bits (78), Expect = 8.4, Method: Compositional matrix adjust. Identities = 20/79 (25%), Positives = 38/79 (48%), Gaps = 6/79 (7%) Query: 118 SCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 + G GLNL + ++ + WW+ +E + R + G + V Y L+A+N+I+ Sbjct: 1041 AGGSGLNL-TAASYVILYDPWWN-----PAVENQAIDRAHRIGQTQPVMAYRLLAKNSIE 1094 Query: 178 ELVLQRLRTKSTIQDLLLN 196 E + + KS + +L Sbjct: 1095 EKIRHLQQQKSLLSSDVLG 1113 >gi|26340418|dbj|BAC33872.1| unnamed protein product [Mus musculus] Length = 1081 Score = 34.7 bits (78), Expect = 8.4, Method: Compositional matrix adjust. Identities = 19/79 (24%), Positives = 39/79 (49%), Gaps = 6/79 (7%) Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 G G+NL +++F S W + Q R + G K+ V +Y L+ + +++E Sbjct: 866 GLGINLASADTVVIFDSDWNPQNDLQ------AQARAHRIGQKKQVNIYRLVTKGSVEED 919 Query: 180 VLQRLRTKSTIQDLLLNAL 198 +L+R + K + L++ + Sbjct: 920 ILERAKKKMVLDHLVIQRM 938 >gi|297622033|ref|YP_003710170.1| putative SWI/SNF helicase family protein [Waddlia chondrophila WSU 86-1044] gi|297377334|gb|ADI39164.1| putative SWI/SNF helicase family protein [Waddlia chondrophila WSU 86-1044] Length = 868 Score = 34.7 bits (78), Expect = 8.5, Method: Compositional matrix adjust. Identities = 35/150 (23%), Positives = 63/150 (42%), Gaps = 17/150 (11%) Query: 56 IKALEVIIEKANAAPIIVAYHFNSDLARLQKA---------FPQGRTLDKDPCTIQEWNE 106 I +E I E+ A ++ F S L+ ++K+ + G+T ++ + Sbjct: 706 IADMETIKEEGKKA--LIFSQFTSMLSIIKKSCSKEGWKFCYLDGQTKERKEQVDHFQTD 763 Query: 107 GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVF 166 +IP + G GLNL +L+F WW+ +ER + R + G K V Sbjct: 764 PEIPFFLISLKAGGVGLNLTAADYVLLF-DPWWN-----PAVERQAIDRAHRIGRKDTVI 817 Query: 167 VYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + ++I+E +L K + D LL+ Sbjct: 818 AKRYLCLDSIEEKMLHLNTAKQHLADQLLD 847 >gi|302839537|ref|XP_002951325.1| hypothetical protein VOLCADRAFT_61396 [Volvox carteri f. nagariensis] gi|300263300|gb|EFJ47501.1| hypothetical protein VOLCADRAFT_61396 [Volvox carteri f. nagariensis] Length = 192 Score = 34.7 bits (78), Expect = 8.6, Method: Compositional matrix adjust. Identities = 26/87 (29%), Positives = 46/87 (52%), Gaps = 11/87 (12%) Query: 101 IQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLE---EHQQMIERIGVTRQ 156 +Q +N + KI + S G G+NL G + ++F+ W+ + Q RIG TR+ Sbjct: 96 MQRFNTDPKIFVFILSTRSGGVGINLT-GADTVIFYDSDWNPAMDAQAQDRCHRIGQTRE 154 Query: 157 RQAGFKRAVFVYYLIAQNTIDELVLQR 183 V +Y L+++NTI+E +L++ Sbjct: 155 V------CVHIYRLVSENTIEENILRK 175 >gi|17232392|ref|NP_488940.1| SWI/SNF family helicase [Nostoc sp. PCC 7120] gi|17134038|dbj|BAB76599.1| SWI/SNF family helicase [Nostoc sp. PCC 7120] Length = 869 Score = 34.7 bits (78), Expect = 8.7, Method: Compositional matrix adjust. Identities = 22/78 (28%), Positives = 38/78 (48%), Gaps = 6/78 (7%) Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 G GLNL + ++ WW+ +E R + G +R V +Y L+A++TI+E Sbjct: 779 GTGLNLT-AADYVIHTDPWWN-----PAVEDQASDRAHRIGQQRPVTIYRLVAKDTIEEK 832 Query: 180 VLQRLRTKSTIQDLLLNA 197 +++ K + D LL Sbjct: 833 IVELHHHKRDLADSLLEG 850 >gi|321455028|gb|EFX66174.1| hypothetical protein DAPPUDRAFT_332470 [Daphnia pulex] Length = 358 Score = 34.7 bits (78), Expect = 8.7, Method: Compositional matrix adjust. Identities = 28/91 (30%), Positives = 39/91 (42%), Gaps = 8/91 (8%) Query: 103 EWN-EGKIPLLFAHPASCGH-GLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 WN IP LF G G+NL +++F + W Q + V R Q Sbjct: 255 SWNGSAHIPRLFLISTKAGGVGINLVAANRVILFDTSW---NPSQDVPSIFCVYRLGQT- 310 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTIQ 191 + FVY IAQ TI+E + R TK ++ Sbjct: 311 --KPCFVYRFIAQGTIEEKIYDRQVTKQSLS 339 >gi|242791140|ref|XP_002481699.1| SNF2 family helicase/ATPase, putative [Talaromyces stipitatus ATCC 10500] gi|242791145|ref|XP_002481700.1| SNF2 family helicase/ATPase, putative [Talaromyces stipitatus ATCC 10500] gi|218718287|gb|EED17707.1| SNF2 family helicase/ATPase, putative [Talaromyces stipitatus ATCC 10500] gi|218718288|gb|EED17708.1| SNF2 family helicase/ATPase, putative [Talaromyces stipitatus ATCC 10500] Length = 1118 Score = 34.7 bits (78), Expect = 8.8, Method: Compositional matrix adjust. Identities = 27/99 (27%), Positives = 47/99 (47%), Gaps = 8/99 (8%) Query: 99 CTIQEWN-EGKIPLLFAHPASCGH-GLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 I E+N EG +F G G+NL +I+V F W+ + Q ++R Sbjct: 547 AAIDEYNREGSDKFIFLLTTRAGGLGINLTTA-DIVVLFDSDWNPQADLQAMDRA----- 600 Query: 157 RQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 + G K+ V V+ + ++ I+E VL+R K + L++ Sbjct: 601 HRIGQKKQVVVFRFVTEHAIEEKVLERAAQKLRLDQLVI 639 >gi|145207323|gb|AAH78216.2| Zranb3 protein [Danio rerio] Length = 541 Score = 34.7 bits (78), Expect = 8.8, Method: Compositional matrix adjust. Identities = 24/86 (27%), Positives = 40/86 (46%), Gaps = 12/86 (13%) Query: 118 SCGHGLNLQYGGNILVFFSLWWD---LEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQN 174 + G GL ++ VF L+W+ +++ + RIG T V ++YLIA+ Sbjct: 396 AAGQGLTFTAASHV-VFAELYWNPGHIKQAEDRAHRIGQTA--------TVHIHYLIAKG 446 Query: 175 TIDELVLQRLRTKSTIQDLLLNALKK 200 T D ++ L K T+ LN K+ Sbjct: 447 TFDTVMWAMLNRKETVTGSALNGKKE 472 >gi|253583434|ref|ZP_04860632.1| non-specific serine/threonine protein kinase [Fusobacterium varium ATCC 27725] gi|251834006|gb|EES62569.1| non-specific serine/threonine protein kinase [Fusobacterium varium ATCC 27725] Length = 1022 Score = 34.7 bits (78), Expect = 9.0, Method: Composition-based stats. Identities = 21/80 (26%), Positives = 39/80 (48%), Gaps = 6/80 (7%) Query: 101 IQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 ++ +N G+ + + G GLNL G + ++ F WW+ +E R + G Sbjct: 912 VERFNSGEGDIFIISLKAGGSGLNLT-GADTVIHFDPWWN-----SSVENQATDRAYRMG 965 Query: 161 FKRAVFVYYLIAQNTIDELV 180 + V V+ +IA+ TI+E + Sbjct: 966 QTKNVNVFKMIAKGTIEEKI 985 >gi|115334572|dbj|BAF33276.1| chromodomain helicase DNA binding protein 1 [Eudromia elegans] Length = 301 Score = 34.7 bits (78), Expect = 9.0, Method: Compositional matrix adjust. Identities = 19/79 (24%), Positives = 39/79 (49%), Gaps = 6/79 (7%) Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 G G+NL +++F S W + Q R + G K+ V +Y L+ + +++E Sbjct: 59 GLGINLASADTVVIFDSDWNPQNDLQAQ------ARAHRIGQKKQVNIYRLVTKGSVEED 112 Query: 180 VLQRLRTKSTIQDLLLNAL 198 +L+R + K + L++ + Sbjct: 113 ILERAKKKMVLDHLVIQRM 131 >gi|240103680|ref|YP_002959989.1| Type III restriction endonuclease, res subunit [Thermococcus gammatolerans EJ3] gi|239911234|gb|ACS34125.1| Type III restriction endonuclease, res subunit [Thermococcus gammatolerans EJ3] Length = 1100 Score = 34.3 bits (77), Expect = 9.2, Method: Compositional matrix adjust. Identities = 19/67 (28%), Positives = 39/67 (58%), Gaps = 6/67 (8%) Query: 118 SCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 + G G+NLQ+ ++L+ + + W+ +Q I R+ + G + V ++ +A+NT + Sbjct: 543 AAGEGINLQFC-HLLINYDIPWNPNRLEQRIGRV-----HRYGQRYPVHIFNFVARNTRE 596 Query: 178 ELVLQRL 184 +VL+RL Sbjct: 597 GMVLERL 603 >gi|154340309|ref|XP_001566111.1| DNA repair protein [Leishmania braziliensis MHOM/BR/75/M2904] gi|134063430|emb|CAM39609.1| putative DNA repair protein [Leishmania braziliensis MHOM/BR/75/M2904] Length = 736 Score = 34.3 bits (77), Expect = 9.2, Method: Compositional matrix adjust. Identities = 25/89 (28%), Positives = 41/89 (46%), Gaps = 6/89 (6%) Query: 109 IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVY 168 I ++ A + G GLNL +++V WW+ IE V R + G K+ V+V Sbjct: 574 IKIVLASKTATGVGLNLTAANHVIVV-DPWWN-----PAIEEQAVHRCYRIGQKKPVYVT 627 Query: 169 YLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 I +TI++ + + K D +L A Sbjct: 628 RFIIADTIEQYCYEICQRKKEFGDAVLRA 656 >gi|196044225|ref|ZP_03111461.1| helicase domain protein [Bacillus cereus 03BB108] gi|196024864|gb|EDX63535.1| helicase domain protein [Bacillus cereus 03BB108] Length = 1066 Score = 34.3 bits (77), Expect = 9.3, Method: Compositional matrix adjust. Identities = 22/68 (32%), Positives = 38/68 (55%), Gaps = 6/68 (8%) Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 G +NLQ+ N ++ + + W+ + +Q + RI + G K VFV+ L+AQNT + Sbjct: 547 GESINLQFC-NQMINYDIPWNPNKLEQRMGRI-----HRIGQKNEVFVFNLVAQNTREGS 600 Query: 180 VLQRLRTK 187 V+ +L K Sbjct: 601 VMTKLLDK 608 >gi|50303907|ref|XP_451901.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140] gi|49641033|emb|CAH02294.1| KLLA0B08327p [Kluyveromyces lactis] Length = 1534 Score = 34.3 bits (77), Expect = 9.3, Method: Compositional matrix adjust. Identities = 23/82 (28%), Positives = 39/82 (47%), Gaps = 6/82 (7%) Query: 118 SCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 + G GLNLQ +++F + W HQ + + R + G K V + LI N+++ Sbjct: 1083 AGGLGLNLQTADTVIIFDTDW---NPHQDLQAQ---DRAHRIGQKNEVRILRLITDNSVE 1136 Query: 178 ELVLQRLRTKSTIQDLLLNALK 199 E +L + K I ++ A K Sbjct: 1137 EAILDKAHAKLDIDGKVIQAGK 1158 >gi|71033631|ref|XP_766457.1| DNA-dependent ATPase [Theileria parva strain Muguga] gi|68353414|gb|EAN34174.1| DNA-dependent ATPase, putative [Theileria parva] Length = 1253 Score = 34.3 bits (77), Expect = 9.3, Method: Compositional matrix adjust. Identities = 20/82 (24%), Positives = 39/82 (47%), Gaps = 6/82 (7%) Query: 106 EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 E K+ + + G G+NL ++++ S W ++ + R + G + V Sbjct: 582 ESKVNIFLLSTRAGGLGINLATADVVILYDSDW------NPQVDLQAIDRAHRIGQLKPV 635 Query: 166 FVYYLIAQNTIDELVLQRLRTK 187 +VY L+ Q TI+E +++R K Sbjct: 636 YVYRLVHQYTIEEKIIERATLK 657 >gi|328869121|gb|EGG17499.1| SNF2-related domain-containing protein [Dictyostelium fasciculatum] Length = 1301 Score = 34.3 bits (77), Expect = 9.5, Method: Composition-based stats. Identities = 24/80 (30%), Positives = 37/80 (46%), Gaps = 7/80 (8%) Query: 122 GLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVL 181 GLNL +L+F W ++ V R + G KR V VY LI TI+E + Sbjct: 933 GLNLTSADRVLIFDPSW-------TTVDNQAVDRVYRIGQKRDVVVYRLITCGTIEEKIY 985 Query: 182 QRLRTKSTIQDLLLNALKKE 201 ++ K ++ +LN K + Sbjct: 986 RKQVFKGSLMKSMLNQDKGQ 1005 >gi|326500828|dbj|BAJ95080.1| predicted protein [Hordeum vulgare subsp. vulgare] Length = 1731 Score = 34.3 bits (77), Expect = 9.6, Method: Compositional matrix adjust. Identities = 20/84 (23%), Positives = 40/84 (47%), Gaps = 6/84 (7%) Query: 118 SCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 + G G+NL +++F S W + Q M +R + G + V +Y + +++ Sbjct: 991 AGGLGINLATADTVIIFDSDWNPQNDLQAM------SRAHRIGQQDTVNIYRFVTCKSVE 1044 Query: 178 ELVLQRLRTKSTIQDLLLNALKKE 201 E +L+R + K + L++ L E Sbjct: 1045 EDILERAKKKMVLDHLVIQKLNAE 1068 >gi|115334540|dbj|BAF33260.1| chromodomain helicase DNA binding protein 1 [Struthio camelus] Length = 301 Score = 34.3 bits (77), Expect = 9.6, Method: Compositional matrix adjust. Identities = 19/81 (23%), Positives = 40/81 (49%), Gaps = 6/81 (7%) Query: 118 SCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 + G G+NL +++F S W + Q R + G K+ V +Y L+ + +++ Sbjct: 54 AGGLGINLASADTVVIFDSDWNPQNDLQAQ------ARAHRIGQKKQVNIYRLVTKGSVE 107 Query: 178 ELVLQRLRTKSTIQDLLLNAL 198 E +L+R + K + L++ + Sbjct: 108 EDILERAKKKMVLDHLVIQRM 128 >gi|311030891|ref|ZP_07708981.1| ATP-dependent RNA helicase [Bacillus sp. m3-13] Length = 565 Score = 34.3 bits (77), Expect = 9.6, Method: Compositional matrix adjust. Identities = 28/98 (28%), Positives = 50/98 (51%), Gaps = 7/98 (7%) Query: 101 IQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 ++E + + +L A A G G+NLQ+ +I + F L W+ +Q I RI + G Sbjct: 416 MRELFKNHVQVLIATEAG-GEGINLQFCNHI-INFDLPWNPMRLEQRIGRI-----HRLG 468 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNAL 198 +R V +Y NT++E +L+ L K + + ++ L Sbjct: 469 QERDVNIYNFATNNTVEEHILKLLYEKINLFERVIGEL 506 >gi|221480872|gb|EEE19293.1| transcription regulatory protein SNF2, putative [Toxoplasma gondii GT1] gi|221501605|gb|EEE27375.1| transcription regulatory protein SNF2, putative [Toxoplasma gondii VEG] Length = 1200 Score = 34.3 bits (77), Expect = 9.6, Method: Compositional matrix adjust. Identities = 21/75 (28%), Positives = 38/75 (50%), Gaps = 6/75 (8%) Query: 109 IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVY 168 IP+ + G G+NL ++++ S W + Q M R + G K AV VY Sbjct: 656 IPIFLLSTRAGGLGINLATADTVILYDSDWNPQVDLQAM------DRVHRIGQKSAVNVY 709 Query: 169 YLIAQNTIDELVLQR 183 L+ ++TI++ +++R Sbjct: 710 RLVHEHTIEQKIIER 724 >gi|168052769|ref|XP_001778812.1| SNF2 family DNA-dependent ATPase [Physcomitrella patens subsp. patens] gi|162669818|gb|EDQ56398.1| SNF2 family DNA-dependent ATPase [Physcomitrella patens subsp. patens] Length = 2126 Score = 34.3 bits (77), Expect = 9.7, Method: Composition-based stats. Identities = 14/48 (29%), Positives = 32/48 (66%) Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKET 202 R + G + V VY LI + +++E +++R R K +++L++++ +K+T Sbjct: 1285 RAHRIGQENVVLVYQLITKCSVEEKIIERSRQKLAMENLVMSSSEKDT 1332 >gi|119632037|gb|EAX11632.1| zinc finger, RAN-binding domain containing 3, isoform CRA_d [Homo sapiens] Length = 458 Score = 34.3 bits (77), Expect = 9.7, Method: Compositional matrix adjust. Identities = 24/84 (28%), Positives = 40/84 (47%), Gaps = 6/84 (7%) Query: 118 SCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 + G GL ++ VF L+WD +Q +R + G +V ++YLIA T+D Sbjct: 344 AAGQGLTFTAASHV-VFAELYWDPGHIKQAEDR-----AHRIGQCSSVNIHYLIANGTLD 397 Query: 178 ELVLQRLRTKSTIQDLLLNALKKE 201 L+ L K+ + LN K++ Sbjct: 398 TLMWGMLNRKAQVTGSTLNGRKEK 421 >gi|115472213|ref|NP_001059705.1| Os07g0497000 [Oryza sativa Japonica Group] gi|113611241|dbj|BAF21619.1| Os07g0497000 [Oryza sativa Japonica Group] Length = 622 Score = 34.3 bits (77), Expect = 9.7, Method: Compositional matrix adjust. Identities = 23/97 (23%), Positives = 44/97 (45%), Gaps = 7/97 (7%) Query: 101 IQEWNEGKIPLLFA-HPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQA 159 I +N+ K +F SCG G+NL ++++ S D H + + R + Sbjct: 351 IARFNQDKSRFVFLLSTRSCGLGINLATADTVIIYDS---DFNPHADI---QAMNRAHRI 404 Query: 160 GFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 G + VY L+ + +++E +L + K + L +N Sbjct: 405 GQSNRLLVYRLVVRASVEERILHLAKKKLMLDQLFVN 441 >gi|5917757|gb|AAD56025.1|AF181828_1 chromodomain helicase DNA binding protein 1 [Nymphicus hollandicus] Length = 918 Score = 34.3 bits (77), Expect = 9.7, Method: Compositional matrix adjust. Identities = 19/79 (24%), Positives = 39/79 (49%), Gaps = 6/79 (7%) Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 G G+NL +++F S W + Q R + G K+ V +Y L+ + +++E Sbjct: 490 GLGINLASADTVVIFDSDWNPQNDLQAQ------ARAHRIGQKKQVNIYRLVTKGSVEED 543 Query: 180 VLQRLRTKSTIQDLLLNAL 198 +L+R + K + L++ + Sbjct: 544 ILERAKKKMVLDHLVIQRM 562 >gi|301607806|ref|XP_002933489.1| PREDICTED: chromodomain-helicase-DNA-binding protein 1-like [Xenopus (Silurana) tropicalis] Length = 1708 Score = 34.3 bits (77), Expect = 9.8, Method: Compositional matrix adjust. Identities = 18/79 (22%), Positives = 39/79 (49%), Gaps = 6/79 (7%) Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 G G+NL +++F S W + Q R + G K+ V +Y L+ + +++E Sbjct: 779 GLGINLASADTVVIFDSDWNPQNDLQ------AQARAHRIGQKKQVNIYRLVTKGSVEED 832 Query: 180 VLQRLRTKSTIQDLLLNAL 198 +++R + K + L++ + Sbjct: 833 IIERAKKKMVLDHLVIQRM 851 >gi|237844775|ref|XP_002371685.1| SWI/SNF-related matrix-associated actin-dependent regulator of chromatin, putative [Toxoplasma gondii ME49] gi|211969349|gb|EEB04545.1| SWI/SNF-related matrix-associated actin-dependent regulator of chromatin, putative [Toxoplasma gondii ME49] Length = 1249 Score = 34.3 bits (77), Expect = 9.8, Method: Compositional matrix adjust. Identities = 21/75 (28%), Positives = 38/75 (50%), Gaps = 6/75 (8%) Query: 109 IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVY 168 IP+ + G G+NL ++++ S W + Q M R + G K AV VY Sbjct: 705 IPIFLLSTRAGGLGINLATADTVILYDSDWNPQVDLQAM------DRVHRIGQKSAVNVY 758 Query: 169 YLIAQNTIDELVLQR 183 L+ ++TI++ +++R Sbjct: 759 RLVHEHTIEQKIIER 773 >gi|168212253|ref|ZP_02637878.1| putative helicase [Clostridium perfringens CPE str. F4969] gi|170716039|gb|EDT28221.1| putative helicase [Clostridium perfringens CPE str. F4969] Length = 1067 Score = 34.3 bits (77), Expect = 9.8, Method: Composition-based stats. Identities = 38/154 (24%), Positives = 74/154 (48%), Gaps = 20/154 (12%) Query: 55 KIKALEVIIEKANAA--PIIVAYHFNSDLARLQKAFPQ---------GRTLDKDPCT-IQ 102 K+ ++ I++ A+ + I++ F S L ++++ F + G T KD ++ Sbjct: 897 KLTVVKEIVKDASESGKKILLFSQFTSVLQKIEEDFKKEDISYLYLDGGTSAKDRVERVK 956 Query: 103 EWNE-GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGF 161 ++NE I + + G GLNL ++++ F WW+ +E R + G Sbjct: 957 KFNEDSNIKVFLISLKAGGVGLNLT-SASVVIHFDPWWN-----PAVEDQATDRAHRFGQ 1010 Query: 162 KRAVFVYYLIAQNTIDE-LVLQRLRTKSTIQDLL 194 + V V L+A++TI+E +VL + + IQ L+ Sbjct: 1011 ENKVEVIKLVAKDTIEEKIVLMQEDKRELIQSLM 1044 >gi|169612371|ref|XP_001799603.1| hypothetical protein SNOG_09308 [Phaeosphaeria nodorum SN15] gi|160702496|gb|EAT83500.2| hypothetical protein SNOG_09308 [Phaeosphaeria nodorum SN15] Length = 1333 Score = 34.3 bits (77), Expect = 9.8, Method: Compositional matrix adjust. Identities = 20/66 (30%), Positives = 34/66 (51%), Gaps = 6/66 (9%) Query: 118 SCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 + G GLNLQ ++++ S W HQ + + R + G K V + LI N+++ Sbjct: 906 AGGLGLNLQTADTVIIYDSDW---NPHQDLQAQ---DRAHRIGQKNEVRILRLITSNSVE 959 Query: 178 ELVLQR 183 E +L+R Sbjct: 960 EKILER 965 >gi|110803396|ref|YP_698309.1| DNA/RNA helicase, SNF2 [Clostridium perfringens SM101] gi|110683897|gb|ABG87267.1| putative helicase [Clostridium perfringens SM101] Length = 1069 Score = 34.3 bits (77), Expect = 9.8, Method: Composition-based stats. Identities = 38/154 (24%), Positives = 74/154 (48%), Gaps = 20/154 (12%) Query: 55 KIKALEVIIEKANAA--PIIVAYHFNSDLARLQKAFPQ---------GRTLDKDPCT-IQ 102 K+ ++ I++ A+ + I++ F S L ++++ F + G T KD ++ Sbjct: 899 KLTVVKEIVKDASESGKKILLFSQFTSVLQKIEEDFKKEDISYLYLDGGTSAKDRVERVK 958 Query: 103 EWNE-GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGF 161 ++NE I + + G GLNL ++++ F WW+ +E R + G Sbjct: 959 KFNEDSNIKVFLISLKAGGVGLNLT-SASVVIHFDPWWN-----PAVEDQATDRAHRFGQ 1012 Query: 162 KRAVFVYYLIAQNTIDE-LVLQRLRTKSTIQDLL 194 + V V L+A++TI+E +VL + + IQ L+ Sbjct: 1013 ENKVEVIKLVAKDTIEEKIVLMQEDKRELIQSLM 1046 >gi|225678325|gb|EEH16609.1| SNF2 family ATP-dependent chromatin-remodeling factor snf21 [Paracoccidioides brasiliensis Pb03] Length = 1391 Score = 34.3 bits (77), Expect = 9.9, Method: Compositional matrix adjust. Identities = 23/82 (28%), Positives = 41/82 (50%), Gaps = 6/82 (7%) Query: 118 SCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 + G GLNLQ ++++ S W HQ + + R + G K V + LI N+++ Sbjct: 893 AGGLGLNLQTADTVIIYDSDW---NPHQDLQAQ---DRAHRIGQKNEVRILRLITSNSVE 946 Query: 178 ELVLQRLRTKSTIQDLLLNALK 199 E +L+R + K + ++ A K Sbjct: 947 ERILERAQFKLDMDGKVIQAGK 968 >gi|189190262|ref|XP_001931470.1| SNF2 family ATP-dependent chromatin-remodeling factor snf21 [Pyrenophora tritici-repentis Pt-1C-BFP] gi|187973076|gb|EDU40575.1| SNF2 family ATP-dependent chromatin-remodeling factor snf21 [Pyrenophora tritici-repentis Pt-1C-BFP] Length = 1273 Score = 34.3 bits (77), Expect = 10.0, Method: Compositional matrix adjust. Identities = 23/82 (28%), Positives = 40/82 (48%), Gaps = 6/82 (7%) Query: 118 SCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 + G GLNLQ ++++ S W HQ + + R + G K V + LI N+++ Sbjct: 836 AGGLGLNLQTADTVIIYDSDW---NPHQDLQAQ---DRAHRIGQKNEVRILRLITSNSVE 889 Query: 178 ELVLQRLRTKSTIQDLLLNALK 199 E +L+R K + ++ A K Sbjct: 890 EKILERANYKLDMDGKVIQAGK 911 >gi|5917753|gb|AAD56021.1|AF181824_1 chromodomain helicase DNA binding protein 1 [Aegolius funereus] Length = 918 Score = 34.3 bits (77), Expect = 10.0, Method: Compositional matrix adjust. Identities = 19/79 (24%), Positives = 39/79 (49%), Gaps = 6/79 (7%) Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 G G+NL +++F S W + Q R + G K+ V +Y L+ + +++E Sbjct: 490 GLGINLASADTVVIFDSDWNPQNDLQAQ------ARAHRIGQKKQVNIYRLVTKGSVEED 543 Query: 180 VLQRLRTKSTIQDLLLNAL 198 +L+R + K + L++ + Sbjct: 544 ILERAKKKMVLDHLVIQRM 562 Searching..................................................done Results from round 2 >gi|317120700|gb|ADV02523.1| SNF2 Dead box helicase [Liberibacter phage SC1] gi|317120743|gb|ADV02565.1| SNF2 Dead box helicase [Liberibacter phage SC2] gi|317120804|gb|ADV02625.1| SNF2 Dead box helicase [Candidatus Liberibacter asiaticus] Length = 461 Score = 306 bits (785), Expect = 9e-82, Method: Composition-based stats. Identities = 205/205 (100%), Positives = 205/205 (100%) Query: 1 MKQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 MKQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE Sbjct: 257 MKQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 316 Query: 61 VIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCG 120 VIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCG Sbjct: 317 VIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCG 376 Query: 121 HGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELV 180 HGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELV Sbjct: 377 HGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELV 436 Query: 181 LQRLRTKSTIQDLLLNALKKETIHV 205 LQRLRTKSTIQDLLLNALKKETIHV Sbjct: 437 LQRLRTKSTIQDLLLNALKKETIHV 461 >gi|255764515|ref|YP_003065608.2| SNF2 related [Candidatus Liberibacter asiaticus str. psy62] gi|254547866|gb|ACT57668.2| SNF2 related [Candidatus Liberibacter asiaticus str. psy62] Length = 458 Score = 306 bits (784), Expect = 1e-81, Method: Composition-based stats. Identities = 205/205 (100%), Positives = 205/205 (100%) Query: 1 MKQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 MKQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE Sbjct: 254 MKQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 313 Query: 61 VIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCG 120 VIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCG Sbjct: 314 VIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCG 373 Query: 121 HGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELV 180 HGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELV Sbjct: 374 HGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELV 433 Query: 181 LQRLRTKSTIQDLLLNALKKETIHV 205 LQRLRTKSTIQDLLLNALKKETIHV Sbjct: 434 LQRLRTKSTIQDLLLNALKKETIHV 458 >gi|317120757|gb|ADV02578.1| SNF2 Dead box helicase [Candidatus Liberibacter asiaticus] Length = 460 Score = 306 bits (784), Expect = 1e-81, Method: Composition-based stats. Identities = 205/205 (100%), Positives = 205/205 (100%) Query: 1 MKQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 MKQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE Sbjct: 256 MKQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 315 Query: 61 VIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCG 120 VIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCG Sbjct: 316 VIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCG 375 Query: 121 HGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELV 180 HGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELV Sbjct: 376 HGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELV 435 Query: 181 LQRLRTKSTIQDLLLNALKKETIHV 205 LQRLRTKSTIQDLLLNALKKETIHV Sbjct: 436 LQRLRTKSTIQDLLLNALKKETIHV 460 >gi|317120844|gb|ADV02665.1| SNF2 Dead box helicase [Candidatus Liberibacter asiaticus] Length = 461 Score = 306 bits (783), Expect = 2e-81, Method: Composition-based stats. Identities = 200/205 (97%), Positives = 203/205 (99%) Query: 1 MKQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 +K Y KFQREL+CD+QGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE Sbjct: 257 LKLYRKFQRELFCDIQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 316 Query: 61 VIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCG 120 VIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCG Sbjct: 317 VIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCG 376 Query: 121 HGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELV 180 HGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELV Sbjct: 377 HGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELV 436 Query: 181 LQRLRTKSTIQDLLLNALKKETIHV 205 LQRLRTKSTIQDLLLNALKKETIHV Sbjct: 437 LQRLRTKSTIQDLLLNALKKETIHV 461 >gi|254780130|ref|YP_003064543.1| hypothetical protein CLIBASIA_00045 [Candidatus Liberibacter asiaticus str. psy62] gi|254039807|gb|ACT56603.1| hypothetical protein CLIBASIA_00045 [Candidatus Liberibacter asiaticus str. psy62] Length = 205 Score = 299 bits (765), Expect = 2e-79, Method: Composition-based stats. Identities = 205/205 (100%), Positives = 205/205 (100%) Query: 1 MKQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 MKQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE Sbjct: 1 MKQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 Query: 61 VIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCG 120 VIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCG Sbjct: 61 VIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCG 120 Query: 121 HGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELV 180 HGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELV Sbjct: 121 HGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELV 180 Query: 181 LQRLRTKSTIQDLLLNALKKETIHV 205 LQRLRTKSTIQDLLLNALKKETIHV Sbjct: 181 LQRLRTKSTIQDLLLNALKKETIHV 205 >gi|295096884|emb|CBK85974.1| Superfamily II DNA/RNA helicases, SNF2 family [Enterobacter cloacae subsp. cloacae NCTC 9394] Length = 466 Score = 294 bits (754), Expect = 3e-78, Method: Composition-based stats. Identities = 117/202 (57%), Positives = 163/202 (80%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEV 61 + Y + ++E++ +L G+ IEA N+A+KTVKCLQ+A+GAVY D+ W E+HD K++AL+ Sbjct: 264 QHYREMEKEMFLELNGKGIEAPNAAAKTVKCLQIASGAVYTDDAGSWSELHDAKLQALDS 323 Query: 62 IIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGH 121 I+ +A AP++VAYH+ DL RL+KAFP+GR LD+DP T+++WN GKIP+LFAHPAS GH Sbjct: 324 ILTEAAGAPVLVAYHWKHDLERLRKAFPKGRHLDQDPQTLRDWNAGKIPVLFAHPASAGH 383 Query: 122 GLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVL 181 GLN+Q GGNILVFFS WWDLE++QQ+IERIG TRQ QAG R VF++++IA T+DE+V+ Sbjct: 384 GLNMQDGGNILVFFSHWWDLEQYQQIIERIGPTRQIQAGHNRPVFIHHIIATGTMDEMVM 443 Query: 182 QRLRTKSTIQDLLLNALKKETI 203 +R +K +QD+LL+A+KK I Sbjct: 444 ERRNSKRKVQDILLDAMKKRGI 465 >gi|194429287|ref|ZP_03061814.1| dead box helicase [Escherichia coli B171] gi|194412695|gb|EDX28990.1| dead box helicase [Escherichia coli B171] Length = 464 Score = 294 bits (752), Expect = 6e-78, Method: Composition-based stats. Identities = 119/202 (58%), Positives = 165/202 (81%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEV 61 +QY + ++E++ +L GE IEA N+A+KT+KCLQ+A+GAVY D+ W E+HD K++AL+ Sbjct: 262 QQYREMEKEMFLELNGEGIEAPNAAAKTLKCLQIASGAVYTDDTGSWSELHDTKLQALDS 321 Query: 62 IIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGH 121 I+ +A AP++VAYH+ DL RL KAFP+GR LD+DP T+++WN GKIP+LFAHPAS GH Sbjct: 322 ILTEAAGAPVLVAYHWKHDLERLLKAFPRGRHLDQDPQTLRDWNSGKIPVLFAHPASAGH 381 Query: 122 GLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVL 181 GLN+Q GGNILVFFS WWDLE++QQ+IERIG TRQ QAG R VF++++IA +T+DE+V+ Sbjct: 382 GLNMQDGGNILVFFSHWWDLEQYQQIIERIGPTRQIQAGHNRPVFIHHIIAADTMDEMVM 441 Query: 182 QRLRTKSTIQDLLLNALKKETI 203 +R +K T+QD+LL+A+KK I Sbjct: 442 ERRNSKRTVQDILLDAMKKRGI 463 >gi|323159216|gb|EFZ45206.1| DEAD box helicase [Escherichia coli E128010] Length = 435 Score = 294 bits (752), Expect = 7e-78, Method: Composition-based stats. Identities = 119/202 (58%), Positives = 165/202 (81%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEV 61 +QY + ++E++ +L GE IEA N+A+KT+KCLQ+A+GAVY D+ W E+HD K++AL+ Sbjct: 233 QQYREMEKEMFLELNGEGIEAPNAAAKTLKCLQIASGAVYTDDTGSWSELHDTKLQALDS 292 Query: 62 IIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGH 121 I+ +A AP++VAYH+ DL RL KAFP+GR LD+DP T+++WN GKIP+LFAHPAS GH Sbjct: 293 ILTEAAGAPVLVAYHWKHDLERLLKAFPRGRHLDQDPQTLRDWNSGKIPVLFAHPASAGH 352 Query: 122 GLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVL 181 GLN+Q GGNILVFFS WWDLE++QQ+IERIG TRQ QAG R VF++++IA +T+DE+V+ Sbjct: 353 GLNMQDGGNILVFFSHWWDLEQYQQIIERIGPTRQIQAGHNRPVFIHHIIAADTMDEMVM 412 Query: 182 QRLRTKSTIQDLLLNALKKETI 203 +R +K T+QD+LL+A+KK I Sbjct: 413 ERRNSKRTVQDILLDAMKKRGI 434 >gi|260845245|ref|YP_003223023.1| putative phage-related DNA helicase [Escherichia coli O103:H2 str. 12009] gi|257760392|dbj|BAI31889.1| predicted phage-related DNA helicase [Escherichia coli O103:H2 str. 12009] Length = 464 Score = 293 bits (751), Expect = 7e-78, Method: Composition-based stats. Identities = 119/202 (58%), Positives = 165/202 (81%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEV 61 +QY + ++E++ +L GE IEA N+A+KT+KCLQ+A+GAVY D+ W E+HD K++AL+ Sbjct: 262 QQYREMEKEMFLELNGEGIEAPNAAAKTLKCLQIASGAVYTDDTGSWSELHDTKLQALDS 321 Query: 62 IIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGH 121 I+ +A AP++VAYH+ DL RL KAFP+GR LD+DP T+++WN GKIP+LFAHPAS GH Sbjct: 322 ILTEAAGAPVLVAYHWKHDLERLLKAFPRGRHLDQDPQTLRDWNSGKIPVLFAHPASAGH 381 Query: 122 GLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVL 181 GLN+Q GGNILVFFS WWDLE++QQ+IERIG TRQ QAG R VF++++IA +T+DE+V+ Sbjct: 382 GLNMQDGGNILVFFSHWWDLEQYQQIIERIGPTRQIQAGHNRPVFIHHIIAADTMDEMVM 441 Query: 182 QRLRTKSTIQDLLLNALKKETI 203 +R +K T+QD+LL+A+KK I Sbjct: 442 ERRNSKRTVQDILLDAMKKRGI 463 >gi|191174014|ref|ZP_03035531.1| dead box helicase [Escherichia coli F11] gi|190905705|gb|EDV65327.1| dead box helicase [Escherichia coli F11] gi|324014343|gb|EGB83562.1| SNF2 domain protein [Escherichia coli MS 60-1] Length = 464 Score = 293 bits (751), Expect = 8e-78, Method: Composition-based stats. Identities = 119/202 (58%), Positives = 165/202 (81%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEV 61 +QY + ++E++ +L GE IEA N+A+KT+KCLQ+A+GAVY D+ W E+HD K++AL+ Sbjct: 262 QQYREMEKEMFLELNGEGIEAPNAAAKTLKCLQIASGAVYTDDTGSWSELHDTKLQALDS 321 Query: 62 IIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGH 121 I+ +A AP++VAYH+ DL RL KAFP+GR LD+DP T+++WN GKIP+LFAHPAS GH Sbjct: 322 ILTEAAGAPVLVAYHWKHDLERLLKAFPRGRHLDQDPQTLRDWNSGKIPVLFAHPASAGH 381 Query: 122 GLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVL 181 GLN+Q GGNILVFFS WWDLE++QQ+IERIG TRQ QAG R VF++++IA +T+DE+V+ Sbjct: 382 GLNMQDGGNILVFFSHWWDLEQYQQIIERIGPTRQIQAGHNRPVFIHHIIAADTMDEMVM 441 Query: 182 QRLRTKSTIQDLLLNALKKETI 203 +R +K T+QD+LL+A+KK I Sbjct: 442 ERRNSKRTVQDILLDAMKKRGI 463 >gi|331654021|ref|ZP_08355022.1| putative protein p41 [Escherichia coli M718] gi|331048870|gb|EGI20946.1| putative protein p41 [Escherichia coli M718] Length = 465 Score = 293 bits (751), Expect = 8e-78, Method: Composition-based stats. Identities = 119/202 (58%), Positives = 165/202 (81%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEV 61 +QY + ++E++ +L GE IEA N+A+KT+KCLQ+A+GAVY D+ W E+HD K++AL+ Sbjct: 263 QQYREMEKEMFLELNGEGIEAPNAAAKTLKCLQIASGAVYTDDTGSWSELHDTKLQALDS 322 Query: 62 IIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGH 121 I+ +A AP++VAYH+ DL RL KAFP+GR LD+DP T+++WN GKIP+LFAHPAS GH Sbjct: 323 ILTEAAGAPVLVAYHWKHDLERLLKAFPRGRHLDQDPQTLRDWNSGKIPVLFAHPASAGH 382 Query: 122 GLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVL 181 GLN+Q GGNILVFFS WWDLE++QQ+IERIG TRQ QAG R VF++++IA +T+DE+V+ Sbjct: 383 GLNMQDGGNILVFFSHWWDLEQYQQIIERIGPTRQIQAGHNRPVFIHHIIAADTMDEMVM 442 Query: 182 QRLRTKSTIQDLLLNALKKETI 203 +R +K T+QD+LL+A+KK I Sbjct: 443 ERRNSKRTVQDILLDAMKKRGI 464 >gi|212712312|ref|ZP_03320440.1| hypothetical protein PROVALCAL_03400 [Providencia alcalifaciens DSM 30120] gi|212685058|gb|EEB44586.1| hypothetical protein PROVALCAL_03400 [Providencia alcalifaciens DSM 30120] Length = 463 Score = 293 bits (750), Expect = 1e-77, Method: Composition-based stats. Identities = 122/200 (61%), Positives = 163/200 (81%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEV 61 KQY + ++E++ +L+ E +EA N+A+KTVKCLQ+A+GA+Y D+ K+W E+HD KI+ALE Sbjct: 264 KQYQEMEKEMFLELEHEGVEALNAAAKTVKCLQIASGAIYTDDSKNWVELHDTKIQALES 323 Query: 62 IIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGH 121 II ++ PI+VAYH+ DL RL KAFP+GR LD DP T+++WN GKIP+LFAHPAS GH Sbjct: 324 IISESGGMPILVAYHWKHDLERLLKAFPKGRNLDADPQTLRDWNAGKIPILFAHPASAGH 383 Query: 122 GLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVL 181 GLNLQ GGNILVFFS WWDLE++QQ+IERIG TRQ QAG+ R VF+++LIA T+DE+V+ Sbjct: 384 GLNLQDGGNILVFFSHWWDLEQYQQIIERIGPTRQIQAGYNRPVFIHHLIAAGTMDEVVM 443 Query: 182 QRLRTKSTIQDLLLNALKKE 201 +R +K IQDLLL A+K++ Sbjct: 444 ERRNSKREIQDLLLEAMKRK 463 >gi|188492213|ref|ZP_02999483.1| dead box helicase [Escherichia coli 53638] gi|188487412|gb|EDU62515.1| dead box helicase [Escherichia coli 53638] gi|332088071|gb|EGI93196.1| DEAD box helicase [Shigella boydii 5216-82] Length = 464 Score = 293 bits (750), Expect = 1e-77, Method: Composition-based stats. Identities = 119/202 (58%), Positives = 165/202 (81%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEV 61 +QY + ++E++ +L GE+IEA N+A+KT KCLQ+A+GAVY D+ W E+HD K++AL+ Sbjct: 262 QQYREMEKEMFLELNGESIEAPNAAAKTQKCLQIASGAVYTDDTGSWSELHDTKLQALDS 321 Query: 62 IIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGH 121 I+ +A AP++VAYH+ DL RL KAFP+GR LD+DP T+++WN GKIP+LFAHPAS GH Sbjct: 322 ILTEAAGAPVLVAYHWKHDLERLLKAFPRGRHLDQDPQTLRDWNSGKIPVLFAHPASAGH 381 Query: 122 GLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVL 181 GLN+Q GGNILVFFS WWDLE++QQ+IERIG TRQ QAG R VF++++IA +T+DE+V+ Sbjct: 382 GLNMQDGGNILVFFSHWWDLEQYQQIIERIGPTRQIQAGHNRPVFIHHIIAADTMDEMVM 441 Query: 182 QRLRTKSTIQDLLLNALKKETI 203 +R +K T+QD+LL+A+KK I Sbjct: 442 ERRNSKRTVQDILLDAMKKRGI 463 >gi|238920126|ref|YP_002933641.1| hypothetical protein NT01EI_2232 [Edwardsiella ictaluri 93-146] gi|238869695|gb|ACR69406.1| conserved hypothetical protein [Edwardsiella ictaluri 93-146] Length = 433 Score = 292 bits (749), Expect = 1e-77, Method: Composition-based stats. Identities = 121/202 (59%), Positives = 165/202 (81%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEV 61 +QY + ++E++ +L GE IEA N+A+KTVKCLQ+A+GAVY D+ W E+HD K++AL+ Sbjct: 231 QQYREMEKEMFLELNGEGIEAPNAAAKTVKCLQIASGAVYTDDTGSWSELHDAKLQALDS 290 Query: 62 IIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGH 121 I+ +A AP++VAYH+ DL RL KAFP+GR LD+DP T+++WN GKIP+LFAHPAS GH Sbjct: 291 ILTEAAGAPVLVAYHWKHDLERLLKAFPRGRHLDQDPQTLRDWNAGKIPVLFAHPASAGH 350 Query: 122 GLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVL 181 GLN+Q GGNILVFFS WWDLE++QQ+IERIG TRQ QAG R VF++++IA +T+DE+V+ Sbjct: 351 GLNMQDGGNILVFFSHWWDLEQYQQIIERIGPTRQIQAGHNRPVFIHHIIAADTMDEMVM 410 Query: 182 QRLRTKSTIQDLLLNALKKETI 203 +R +K T+QDLLL+A+KK I Sbjct: 411 ERRNSKRTVQDLLLDAMKKRGI 432 >gi|218555139|ref|YP_002388052.1| hypothetical protein ECIAI1_2669 [Escherichia coli IAI1] gi|218361907|emb|CAQ99507.1| conserved hypothetical protein from bacteriophage origin [Escherichia coli IAI1] Length = 464 Score = 292 bits (749), Expect = 1e-77, Method: Composition-based stats. Identities = 119/202 (58%), Positives = 165/202 (81%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEV 61 +QY + ++E++ +L GE IEA N+A+KT+KCLQ+A+GAVY D+ W E+HD K++AL+ Sbjct: 262 QQYREMEKEMFLELNGEGIEAPNAAAKTLKCLQIASGAVYTDDTGSWSELHDTKLQALDS 321 Query: 62 IIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGH 121 I+ +A AP++VAYH+ DL RL KAFP+GR LD+DP T+++WN GKIP+LFAHPAS GH Sbjct: 322 ILTEAAGAPVLVAYHWKHDLERLLKAFPRGRHLDQDPQTLRDWNSGKIPVLFAHPASAGH 381 Query: 122 GLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVL 181 GLN+Q GGNILVFFS WWDLE++QQ+IERIG TRQ QAG R VF++++IA +T+DE+V+ Sbjct: 382 GLNMQDGGNILVFFSHWWDLEQYQQIIERIGPTRQIQAGHNRPVFIHHIIAADTMDEMVM 441 Query: 182 QRLRTKSTIQDLLLNALKKETI 203 +R +K T+QD+LL+A+KK I Sbjct: 442 ERRNSKRTVQDILLDAMKKRGI 463 >gi|262043428|ref|ZP_06016553.1| SNF2 domain protein [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] gi|259039254|gb|EEW40400.1| SNF2 domain protein [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] Length = 464 Score = 292 bits (747), Expect = 3e-77, Method: Composition-based stats. Identities = 120/202 (59%), Positives = 165/202 (81%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEV 61 +QY + ++E++ +L GE IEA N+A+KTVKCLQ+A+GAVY D+ W E+HD K++AL+ Sbjct: 262 QQYREMEKEMFLELNGEGIEAPNAAAKTVKCLQIASGAVYTDDAGSWSELHDAKLQALDS 321 Query: 62 IIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGH 121 I+ +A AP++VAYH+ DL RL KAFP+GR LD+DP T+++WN GKIP+LFAHPAS GH Sbjct: 322 ILTEAAGAPVLVAYHWKHDLERLLKAFPRGRHLDQDPQTLRDWNAGKIPVLFAHPASAGH 381 Query: 122 GLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVL 181 GLN+Q GGNILVFFS WWDLE++QQ+IERIG TRQ QAG R VF++++IA +T+DE+V+ Sbjct: 382 GLNMQDGGNILVFFSHWWDLEQYQQIIERIGPTRQIQAGHNRPVFIHHIIAVDTMDEMVM 441 Query: 182 QRLRTKSTIQDLLLNALKKETI 203 +R +K T+QD+LL+A+KK I Sbjct: 442 ERRDSKRTVQDILLDAMKKRGI 463 >gi|291283833|ref|YP_003500651.1| Superfamily II DNA/RNA helicases, SNF2 family [Escherichia coli O55:H7 str. CB9615] gi|290763706|gb|ADD57667.1| Superfamily II DNA/RNA helicases, SNF2 family [Escherichia coli O55:H7 str. CB9615] Length = 463 Score = 291 bits (746), Expect = 3e-77, Method: Composition-based stats. Identities = 118/202 (58%), Positives = 165/202 (81%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEV 61 +QY + ++E++ +L GE IEA N+A+KT+KCLQ+A+GA+Y D+ W E+HD K++AL+ Sbjct: 261 QQYREMEKEMFLELNGEGIEAPNAAAKTLKCLQIASGALYTDDTGSWSELHDTKLQALDS 320 Query: 62 IIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGH 121 I+ +A AP++VAYH+ DL RL KAFP+GR LD+DP T+++WN GKIP+LFAHPAS GH Sbjct: 321 ILTEAAGAPVLVAYHWKHDLERLLKAFPRGRHLDQDPQTLRDWNSGKIPVLFAHPASAGH 380 Query: 122 GLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVL 181 GLN+Q GGNILVFFS WWDLE++QQ+IERIG TRQ QAG R VF++++IA +T+DE+V+ Sbjct: 381 GLNMQDGGNILVFFSHWWDLEQYQQIIERIGPTRQIQAGHNRPVFIHHIIAADTMDEMVM 440 Query: 182 QRLRTKSTIQDLLLNALKKETI 203 +R +K T+QD+LL+A+KK I Sbjct: 441 ERRNSKRTVQDILLDAMKKRGI 462 >gi|204927042|ref|ZP_03218244.1| dead box helicase [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] gi|204323707|gb|EDZ08902.1| dead box helicase [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] Length = 463 Score = 290 bits (743), Expect = 7e-77, Method: Composition-based stats. Identities = 118/202 (58%), Positives = 163/202 (80%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEV 61 +QY + ++E++ +L GE IEA N+A+KTVKCLQ+A+GAVY D+ W E+HD K++AL+ Sbjct: 261 QQYREMEKEMFLELNGEGIEAPNAAAKTVKCLQIASGAVYTDDAGSWSELHDAKLQALDS 320 Query: 62 IIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGH 121 I+ +A AP++VAYH+ DL RL KAFP+GR LD+ P T+++WN GKIP+LFAHPAS GH Sbjct: 321 ILTEAAGAPVLVAYHWKHDLERLLKAFPRGRHLDQGPQTLRDWNAGKIPVLFAHPASAGH 380 Query: 122 GLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVL 181 GLN+Q GGNILVFFS WWDLE++QQ+IERIG TRQ QAG R VF++++I +T+DE+V+ Sbjct: 381 GLNMQDGGNILVFFSHWWDLEQYQQIIERIGPTRQIQAGHNRPVFIHHIITADTMDEMVM 440 Query: 182 QRLRTKSTIQDLLLNALKKETI 203 +R +K T+QD+LL+A+KK I Sbjct: 441 ERRNSKRTVQDILLDAMKKRGI 462 >gi|323173123|gb|EFZ58754.1| DEAD box helicase [Escherichia coli LT-68] Length = 433 Score = 290 bits (742), Expect = 8e-77, Method: Composition-based stats. Identities = 118/202 (58%), Positives = 164/202 (81%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEV 61 +QY + ++E++ +L GE IEA N+A+KT+KCLQ+A+GAVY D+ W E+HD K++AL+ Sbjct: 231 QQYREMEKEMFLELNGEGIEAPNAAAKTLKCLQIASGAVYTDDAGSWSELHDTKLQALDS 290 Query: 62 IIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGH 121 I+ +A AP++VAYH+ DL RL KAFP+GR LD+DP T+++WN GKIP+LFAHPAS GH Sbjct: 291 ILTEAAGAPVLVAYHWKHDLERLLKAFPRGRHLDQDPQTLRDWNSGKIPVLFAHPASAGH 350 Query: 122 GLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVL 181 GLN+Q GG ILVFFS WWDLE++QQ+IERIG TRQ QAG R VF++++IA +T+DE+V+ Sbjct: 351 GLNMQDGGYILVFFSHWWDLEQYQQIIERIGPTRQIQAGHNRPVFIHHIIAADTMDEMVM 410 Query: 182 QRLRTKSTIQDLLLNALKKETI 203 +R +K T+QD+LL+A+KK I Sbjct: 411 ERRNSKRTVQDILLDAMKKRGI 432 >gi|331648305|ref|ZP_08349394.1| putative protein p41 [Escherichia coli M605] gi|331042854|gb|EGI14995.1| putative protein p41 [Escherichia coli M605] Length = 464 Score = 290 bits (742), Expect = 9e-77, Method: Composition-based stats. Identities = 119/202 (58%), Positives = 164/202 (81%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEV 61 +QY + ++E++ +L GE IEA N+A+KT+KCLQ+A+GAVY D+ W E+HD K++AL+ Sbjct: 262 QQYREMEKEMFLELNGEGIEAPNAAAKTLKCLQIASGAVYTDDTGSWSELHDTKLQALDS 321 Query: 62 IIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGH 121 I+ +A AP++VAYH+ DL RL KAFP+GR LD+DP T+++WN GKIP+LFAHPAS H Sbjct: 322 ILTEAAGAPVLVAYHWKHDLERLLKAFPRGRHLDQDPQTLRDWNSGKIPVLFAHPASASH 381 Query: 122 GLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVL 181 GLN+Q GGNILVFFS WWDLE++QQ+IERIG TRQ QAG R VF++++IA +T+DE+V+ Sbjct: 382 GLNMQDGGNILVFFSHWWDLEQYQQIIERIGPTRQIQAGHNRPVFIHHIIAADTMDEMVM 441 Query: 182 QRLRTKSTIQDLLLNALKKETI 203 +R +K T+QD+LLNA+KK I Sbjct: 442 ERRNSKRTVQDILLNAMKKRGI 463 >gi|82777983|ref|YP_404332.1| hypothetical protein SDY_2798 [Shigella dysenteriae Sd197] gi|309784630|ref|ZP_07679265.1| DEAD box helicase [Shigella dysenteriae 1617] gi|81242131|gb|ABB62841.1| hypothetical bacteriophage protein [Shigella dysenteriae Sd197] gi|308927527|gb|EFP72999.1| DEAD box helicase [Shigella dysenteriae 1617] Length = 311 Score = 287 bits (735), Expect = 6e-76, Method: Composition-based stats. Identities = 118/202 (58%), Positives = 165/202 (81%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEV 61 +QY + ++E++ +L GE IEA N+A+KT+KCLQ+A+GAVY D+ W E+HD K++AL+ Sbjct: 109 QQYREMEKEMFLELNGEGIEAPNAAAKTLKCLQIASGAVYTDDAGSWSELHDTKLQALDS 168 Query: 62 IIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGH 121 I+ +A AP++VAYH+ DL RL KAFP+GR LD+DP T+++WN GKIP+LFAHPAS GH Sbjct: 169 ILTEAAGAPVLVAYHWKHDLERLLKAFPRGRHLDQDPQTLRDWNSGKIPVLFAHPASAGH 228 Query: 122 GLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVL 181 GLN+Q GGNILVFFS WWDLE++QQ+IERIG TRQ QAG R VF++++IA +T+DE+V+ Sbjct: 229 GLNMQDGGNILVFFSHWWDLEQYQQIIERIGPTRQIQAGHNRPVFIHHIIAADTMDEMVM 288 Query: 182 QRLRTKSTIQDLLLNALKKETI 203 ++ +K T+QD+LL+A+KK I Sbjct: 289 EQRNSKRTVQDILLDAMKKRGI 310 >gi|170023443|ref|YP_001719948.1| hypothetical protein YPK_1197 [Yersinia pseudotuberculosis YPIII] gi|169749977|gb|ACA67495.1| conserved hypothetical protein [Yersinia pseudotuberculosis YPIII] Length = 463 Score = 287 bits (734), Expect = 7e-76, Method: Composition-based stats. Identities = 121/201 (60%), Positives = 159/201 (79%) Query: 3 QYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVI 62 QY + ++E++ + IEA N+ASKT+KCLQLA+GA+Y DE +W E+HD K++ALE I Sbjct: 262 QYKEMEKEMFLQIGDHGIEAMNAASKTMKCLQLASGAIYTDEAGNWTEIHDAKLQALESI 321 Query: 63 IEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHG 122 I +A+ P++VAYHF SDLARL KAFP+GR LD DP T ++WN G IP+LFAHPAS GHG Sbjct: 322 ITEASGMPVLVAYHFKSDLARLLKAFPKGRHLDADPQTQRDWNAGLIPVLFAHPASAGHG 381 Query: 123 LNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQ 182 LNLQ GGNIL FFS WWDLE++QQ+IERIG TRQ QAG KR V++Y++IA++T+DELV + Sbjct: 382 LNLQDGGNILAFFSHWWDLEQYQQIIERIGPTRQAQAGHKRPVWIYHIIAEDTVDELVKE 441 Query: 183 RLRTKSTIQDLLLNALKKETI 203 R +K +QD+LL A+KK + Sbjct: 442 RRDSKREVQDILLEAMKKRGL 462 >gi|332160953|ref|YP_004297530.1| Dead box helicase [Yersinia enterocolitica subsp. palearctica 105.5R(r)] gi|325665183|gb|ADZ41827.1| Dead box helicase [Yersinia enterocolitica subsp. palearctica 105.5R(r)] Length = 432 Score = 287 bits (734), Expect = 8e-76, Method: Composition-based stats. Identities = 120/201 (59%), Positives = 160/201 (79%) Query: 3 QYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVI 62 QY + ++E++ + +IEA N+ASKT+KCLQLA+GA+Y DE +W E+HD K++ALE I Sbjct: 231 QYKEMEKEMFLQIGDHDIEAMNAASKTMKCLQLASGAIYTDEAGNWTEIHDAKLQALESI 290 Query: 63 IEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHG 122 + +A+ P++VAYHF SDLARL KAFP+GR LD DP T ++WN G IP+LFAHPAS GHG Sbjct: 291 VAEASGMPVLVAYHFKSDLARLLKAFPKGRHLDADPQTQRDWNAGLIPVLFAHPASAGHG 350 Query: 123 LNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQ 182 LNLQ GGNIL FFS WWDLE++QQ+IERIG TRQ QAG KR V++Y++IA++T+DELV + Sbjct: 351 LNLQDGGNILAFFSHWWDLEQYQQIIERIGPTRQAQAGHKRPVWIYHIIAEDTVDELVKE 410 Query: 183 RLRTKSTIQDLLLNALKKETI 203 R +K +QD+LL A+KK + Sbjct: 411 RRDSKREVQDILLEAMKKRGL 431 >gi|71898924|ref|ZP_00681091.1| SNF2-related [Xylella fastidiosa Ann-1] gi|71731336|gb|EAO33400.1| SNF2-related [Xylella fastidiosa Ann-1] Length = 472 Score = 286 bits (732), Expect = 1e-75, Method: Composition-based stats. Identities = 119/202 (58%), Positives = 158/202 (78%), Gaps = 2/202 (0%) Query: 2 KQYHKFQRELYCDLQ-GENIEAFNSASKTVKCLQLANGAVYYDEEKH-WKEVHDEKIKAL 59 + Y +++++ L+ G +EAFN+ASKT+KCLQLANGA+Y D+ + W+ VHD K++AL Sbjct: 257 RLYKAMEQDMFIALECGAEVEAFNAASKTIKCLQLANGALYTDDTRQAWEVVHDAKLEAL 316 Query: 60 EVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASC 119 IIE+A P++VAYHF SD+ARLQ+AFP+GR LDK P TI++WN G IP+LFAHPAS Sbjct: 317 HDIIEEAAGMPVLVAYHFKSDVARLQRAFPKGRALDKHPDTIRDWNAGNIPVLFAHPASA 376 Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 GHGLNLQ GGNILVFF WWDLE++QQ+IERIG TRQ QAG R VF+++++A T+DEL Sbjct: 377 GHGLNLQDGGNILVFFGHWWDLEQYQQIIERIGPTRQAQAGHTRPVFIHHIVAAGTVDEL 436 Query: 180 VLQRLRTKSTIQDLLLNALKKE 201 V+ R +K +QDLLL A+K+ Sbjct: 437 VMARRESKREVQDLLLEAVKRR 458 >gi|71898992|ref|ZP_00681158.1| SNF2-related [Xylella fastidiosa Ann-1] gi|71731238|gb|EAO33303.1| SNF2-related [Xylella fastidiosa Ann-1] Length = 472 Score = 286 bits (732), Expect = 1e-75, Method: Composition-based stats. Identities = 119/202 (58%), Positives = 158/202 (78%), Gaps = 2/202 (0%) Query: 2 KQYHKFQRELYCDLQ-GENIEAFNSASKTVKCLQLANGAVYYDEEKH-WKEVHDEKIKAL 59 + Y +++++ L+ G +EAFN+ASKT+KCLQLANGA+Y D+ + W+ VHD K++AL Sbjct: 257 RLYKAMEQDMFIALECGAEVEAFNAASKTIKCLQLANGALYTDDTRQAWEVVHDAKLEAL 316 Query: 60 EVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASC 119 IIE+A P++VAYHF SD+ARLQ+AFP+GR LDK P TI++WN G IP+LFAHPAS Sbjct: 317 HDIIEEAAGMPVLVAYHFKSDVARLQRAFPKGRALDKHPETIRDWNAGNIPVLFAHPASA 376 Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 GHGLNLQ GGNIL FF WWDLE++QQ+IERIG TRQ QAG KR VF+++++A T+DEL Sbjct: 377 GHGLNLQDGGNILAFFGHWWDLEQYQQIIERIGPTRQAQAGHKRPVFIHHIVAAGTVDEL 436 Query: 180 VLQRLRTKSTIQDLLLNALKKE 201 V+ R +K +QDLLL A+K+ Sbjct: 437 VMARRESKREVQDLLLEAVKRR 458 >gi|330862108|emb|CBX72272.1| putative protein p41 [Yersinia enterocolitica W22703] Length = 432 Score = 286 bits (731), Expect = 2e-75, Method: Composition-based stats. Identities = 119/201 (59%), Positives = 159/201 (79%) Query: 3 QYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVI 62 QY + ++E++ + +IEA N+ASKT+KCLQLA+GA+Y DE +W E+HD K++ALE I Sbjct: 231 QYKEMEKEMFLQIGDHDIEAMNAASKTMKCLQLASGAIYTDEAGNWTEIHDAKLQALESI 290 Query: 63 IEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHG 122 + +A+ P++VAYHF SDL RL KAFP+GR LD DP T ++WN G IP+LFAHPAS GHG Sbjct: 291 VAEASGMPVLVAYHFKSDLTRLLKAFPKGRHLDADPQTQRDWNAGLIPVLFAHPASAGHG 350 Query: 123 LNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQ 182 LNLQ GGNIL FFS WWDLE++QQ+IERIG TRQ QAG KR V++Y++IA++T+DELV + Sbjct: 351 LNLQDGGNILAFFSHWWDLEQYQQIIERIGPTRQAQAGHKRPVWIYHIIAEDTVDELVKE 410 Query: 183 RLRTKSTIQDLLLNALKKETI 203 R +K +QD+LL A+KK + Sbjct: 411 RRDSKREVQDILLEAMKKRGL 431 >gi|71901323|ref|ZP_00683419.1| SNF2-related [Xylella fastidiosa Ann-1] gi|71728907|gb|EAO31042.1| SNF2-related [Xylella fastidiosa Ann-1] Length = 472 Score = 286 bits (731), Expect = 2e-75, Method: Composition-based stats. Identities = 119/202 (58%), Positives = 158/202 (78%), Gaps = 2/202 (0%) Query: 2 KQYHKFQRELYCDLQ-GENIEAFNSASKTVKCLQLANGAVYYDEEKH-WKEVHDEKIKAL 59 + Y +++++ L+ G +EAFN+ASKT+KCLQLANGA+Y D+ + W+ VHD K++AL Sbjct: 257 RLYKAMEQDMFIALECGAEVEAFNAASKTIKCLQLANGALYTDDTRQAWEVVHDAKLEAL 316 Query: 60 EVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASC 119 IIE+A P++VAYHF SD+ARLQ+AFP+GR LDK P TI++WN G IP+LFAHPAS Sbjct: 317 HDIIEEAAGMPVLVAYHFKSDVARLQRAFPKGRALDKHPDTIRDWNAGNIPVLFAHPASA 376 Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 GHGLNLQ GGNIL FF WWDLE++QQ+IERIG TRQ QAG KR VF+++++A T+DEL Sbjct: 377 GHGLNLQDGGNILAFFGHWWDLEQYQQIIERIGPTRQAQAGHKRPVFIHHIVAAGTVDEL 436 Query: 180 VLQRLRTKSTIQDLLLNALKKE 201 V+ R +K +QDLLL A+K+ Sbjct: 437 VMARRESKREVQDLLLEAVKRR 458 >gi|71902063|ref|ZP_00684103.1| SNF2-related [Xylella fastidiosa Ann-1] gi|71728174|gb|EAO30365.1| SNF2-related [Xylella fastidiosa Ann-1] Length = 472 Score = 285 bits (730), Expect = 2e-75, Method: Composition-based stats. Identities = 118/202 (58%), Positives = 158/202 (78%), Gaps = 2/202 (0%) Query: 2 KQYHKFQRELYCDLQ-GENIEAFNSASKTVKCLQLANGAVYYDEEKH-WKEVHDEKIKAL 59 + Y +++++ L+ G +EAFN+ASKT+KCLQLANGA+Y D+ + W+ VHD K++AL Sbjct: 257 RLYKAMEQDMFIALECGAEVEAFNAASKTIKCLQLANGALYTDDTRQAWEVVHDAKLEAL 316 Query: 60 EVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASC 119 IIE+A P++VAYHF SD+ARLQ+AFP+GR LDK+P TI++WN G IP+LFAHPAS Sbjct: 317 HDIIEEAAGMPVLVAYHFKSDVARLQRAFPKGRALDKNPDTIRDWNAGNIPVLFAHPASA 376 Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 GHGLNLQ GGNIL FF WWDLE++QQ+IERIG TRQ QAG R VF+++++A T+DEL Sbjct: 377 GHGLNLQDGGNILAFFGHWWDLEQYQQIIERIGPTRQAQAGHTRPVFIHHIVAAGTVDEL 436 Query: 180 VLQRLRTKSTIQDLLLNALKKE 201 V+ R +K +QDLLL A+K+ Sbjct: 437 VMARRESKREVQDLLLEAVKRR 458 >gi|71899887|ref|ZP_00682035.1| SNF2-related [Xylella fastidiosa Ann-1] gi|71730327|gb|EAO32410.1| SNF2-related [Xylella fastidiosa Ann-1] Length = 472 Score = 285 bits (730), Expect = 2e-75, Method: Composition-based stats. Identities = 118/202 (58%), Positives = 157/202 (77%), Gaps = 2/202 (0%) Query: 2 KQYHKFQRELYCDLQ-GENIEAFNSASKTVKCLQLANGAVYYDEEKH-WKEVHDEKIKAL 59 + Y +++++ L+ G +EAFN+ASKT+KCLQLANGA+Y D+ + W+ VHD K++AL Sbjct: 257 RLYKAMEQDMFIALECGAEVEAFNAASKTIKCLQLANGALYTDDTRQAWEVVHDAKLEAL 316 Query: 60 EVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASC 119 IIE+A P++VAYHF SD+ARLQ+AFP+GR LDK P TI++WN G IP+LFAHPAS Sbjct: 317 HDIIEEAAGMPVLVAYHFKSDVARLQRAFPKGRALDKHPDTIRDWNAGNIPVLFAHPASA 376 Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 GHGLNLQ GGNIL FF WWDLE++QQ+IERIG TRQ QAG R VF+++++A T+DEL Sbjct: 377 GHGLNLQDGGNILAFFGHWWDLEQYQQIIERIGPTRQAQAGHTRPVFIHHIVAAGTVDEL 436 Query: 180 VLQRLRTKSTIQDLLLNALKKE 201 V+ R +K +QDLLL A+K+ Sbjct: 437 VMARRESKREVQDLLLEAVKRR 458 >gi|28199029|ref|NP_779343.1| hypothetical protein PD1137 [Xylella fastidiosa Temecula1] gi|182681751|ref|YP_001829911.1| SNF2-related protein [Xylella fastidiosa M23] gi|28057127|gb|AAO28992.1| phage-related protein [Xylella fastidiosa Temecula1] gi|182631861|gb|ACB92637.1| SNF2-related protein [Xylella fastidiosa M23] gi|307580180|gb|ADN64149.1| SNF2-related protein [Xylella fastidiosa subsp. fastidiosa GB514] Length = 472 Score = 285 bits (730), Expect = 2e-75, Method: Composition-based stats. Identities = 118/202 (58%), Positives = 157/202 (77%), Gaps = 2/202 (0%) Query: 2 KQYHKFQRELYCDLQ-GENIEAFNSASKTVKCLQLANGAVYYDEEKH-WKEVHDEKIKAL 59 + Y +++++ L+ G +EAFN+ASKT+KCLQLANGA+Y D+ + W+ VHD K++AL Sbjct: 257 RLYKAMEQDMFIALECGAEVEAFNAASKTIKCLQLANGALYTDDTRQAWEVVHDAKLEAL 316 Query: 60 EVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASC 119 IIE+A P++VAYHF SD+ARLQ+AFP+GR LDK P TI++WN G IP+LFAHPAS Sbjct: 317 HDIIEEAAGMPVLVAYHFKSDVARLQRAFPKGRALDKHPDTIRDWNAGNIPVLFAHPASA 376 Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 GHGLNLQ GGNIL FF WWDLE++QQ+IERIG TRQ QAG R VF+++++A T+DEL Sbjct: 377 GHGLNLQDGGNILAFFGHWWDLEQYQQIIERIGPTRQAQAGHTRPVFIHHIVAAGTVDEL 436 Query: 180 VLQRLRTKSTIQDLLLNALKKE 201 V+ R +K +QDLLL A+K+ Sbjct: 437 VMARRESKREVQDLLLEAVKRR 458 >gi|71276270|ref|ZP_00652548.1| SNF2-related [Xylella fastidiosa Dixon] gi|71162878|gb|EAO12602.1| SNF2-related [Xylella fastidiosa Dixon] Length = 472 Score = 285 bits (729), Expect = 2e-75, Method: Composition-based stats. Identities = 120/202 (59%), Positives = 160/202 (79%), Gaps = 2/202 (0%) Query: 2 KQYHKFQRELYCDLQ-GENIEAFNSASKTVKCLQLANGAVYYDEEKH-WKEVHDEKIKAL 59 + Y +++++ L+ G +EAFN+ASKT+KCLQLANGA+Y D+ + W+ VHD K++AL Sbjct: 257 RLYKAMEQDMFIALECGAEVEAFNAASKTIKCLQLANGALYTDDTRQAWEVVHDAKLEAL 316 Query: 60 EVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASC 119 IIE+A P++VAYHF SD+ARLQ+AFP+GR LDK+P TI++WN G IP+LFAHPAS Sbjct: 317 HDIIEEAAGMPVLVAYHFKSDVARLQRAFPKGRALDKNPDTIRDWNAGNIPVLFAHPASA 376 Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 GHGLNLQ GGNIL FF WWDLE++QQ+IERIG TRQ QAG KR VF+++++A NT+DEL Sbjct: 377 GHGLNLQDGGNILAFFGHWWDLEQYQQIIERIGPTRQAQAGHKRPVFIHHIVAANTVDEL 436 Query: 180 VLQRLRTKSTIQDLLLNALKKE 201 V+ R +K +QDLLL A+K+ Sbjct: 437 VMARRESKREVQDLLLEAVKRR 458 >gi|71275472|ref|ZP_00651758.1| SNF2-related [Xylella fastidiosa Dixon] gi|71163772|gb|EAO13488.1| SNF2-related [Xylella fastidiosa Dixon] Length = 472 Score = 285 bits (729), Expect = 3e-75, Method: Composition-based stats. Identities = 118/202 (58%), Positives = 158/202 (78%), Gaps = 2/202 (0%) Query: 2 KQYHKFQRELYCDLQ-GENIEAFNSASKTVKCLQLANGAVYYDEEKH-WKEVHDEKIKAL 59 + Y +++++ L+ G +EAFN+ASKT+KCLQLANGA+Y D+ + W+ VHD K++AL Sbjct: 257 RLYKAMEQDMFIALECGAEVEAFNAASKTIKCLQLANGALYTDDTRQAWEVVHDAKLEAL 316 Query: 60 EVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASC 119 IIE+A P++VAYHF SD+ARLQ+AFP+GR LDK+P TI++WN G IP+LFAHPAS Sbjct: 317 HDIIEEAAGMPVLVAYHFKSDVARLQRAFPKGRALDKNPDTIRDWNAGNIPVLFAHPASA 376 Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 GHGLNLQ GGNIL FF WWDLE++QQ+IERIG TRQ QAG R VF+++++A T+DEL Sbjct: 377 GHGLNLQDGGNILAFFGHWWDLEQYQQIIERIGPTRQAQAGHTRPVFIHHIVAAGTVDEL 436 Query: 180 VLQRLRTKSTIQDLLLNALKKE 201 V+ R +K +QDLLL A+K+ Sbjct: 437 VMARRESKREVQDLLLEAVKRR 458 >gi|170729638|ref|YP_001775071.1| hypothetical protein Xfasm12_0427 [Xylella fastidiosa M12] gi|167964431|gb|ACA11441.1| conserved hypothetical protein [Xylella fastidiosa M12] Length = 472 Score = 285 bits (729), Expect = 3e-75, Method: Composition-based stats. Identities = 118/202 (58%), Positives = 158/202 (78%), Gaps = 2/202 (0%) Query: 2 KQYHKFQRELYCDLQ-GENIEAFNSASKTVKCLQLANGAVYYDEEKH-WKEVHDEKIKAL 59 + Y +++++ L+ G +EAFN+ASKT+KCLQLANGA+Y D+ + W+ VHD K++AL Sbjct: 257 RLYKAMEQDMFIALECGAEVEAFNAASKTIKCLQLANGALYTDDTRQAWEVVHDAKLEAL 316 Query: 60 EVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASC 119 IIE+A P++VAYHF SD+ARLQ+AFP+GR LDK+P TI++WN G IP+LFAHPAS Sbjct: 317 HDIIEEAAGMPVLVAYHFKSDVARLQRAFPKGRALDKNPDTIRDWNAGNIPVLFAHPASA 376 Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 GHGLNLQ GGNIL FF WWDLE++QQ+IERIG TRQ QAG R VF+++++A T+DEL Sbjct: 377 GHGLNLQDGGNILAFFGHWWDLEQYQQIIERIGPTRQAQAGHTRPVFIHHIVAAGTVDEL 436 Query: 180 VLQRLRTKSTIQDLLLNALKKE 201 V+ R +K +QDLLL A+K+ Sbjct: 437 VMARRESKREVQDLLLEAVKRR 458 >gi|71900964|ref|ZP_00683077.1| SNF2-related [Xylella fastidiosa Ann-1] gi|71729269|gb|EAO31387.1| SNF2-related [Xylella fastidiosa Ann-1] Length = 472 Score = 285 bits (729), Expect = 3e-75, Method: Composition-based stats. Identities = 120/202 (59%), Positives = 160/202 (79%), Gaps = 2/202 (0%) Query: 2 KQYHKFQRELYCDLQ-GENIEAFNSASKTVKCLQLANGAVYYDEEKH-WKEVHDEKIKAL 59 + Y +++++ L+ G +EAFN+ASKT+KCLQLANGA+Y D+ + W+ VHD K++AL Sbjct: 257 RLYKAMEQDMFIALECGAEVEAFNAASKTIKCLQLANGALYTDDTRQAWEVVHDAKLEAL 316 Query: 60 EVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASC 119 IIE+A P++VAYHF SD+ARLQ+AFP+GR LDK+P TI++WN G IP+LFAHPAS Sbjct: 317 HDIIEEAAGMPVLVAYHFKSDVARLQRAFPKGRALDKNPDTIRDWNAGNIPVLFAHPASA 376 Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 GHGLNLQ GGNIL FF WWDLE++QQ+IERIG TRQ QAG KR VF+++++A NT+DEL Sbjct: 377 GHGLNLQDGGNILAFFGHWWDLEQYQQIIERIGPTRQAQAGHKRPVFIHHIVAANTVDEL 436 Query: 180 VLQRLRTKSTIQDLLLNALKKE 201 V+ R +K +QDLLL A+K+ Sbjct: 437 VMARRESKREVQDLLLEAVKRR 458 >gi|28198299|ref|NP_778613.1| hypothetical protein PD0382 [Xylella fastidiosa Temecula1] gi|28199082|ref|NP_779396.1| hypothetical protein PD1194 [Xylella fastidiosa Temecula1] gi|182680936|ref|YP_001829096.1| SNF2-related protein [Xylella fastidiosa M23] gi|182681808|ref|YP_001829968.1| SNF2-related protein [Xylella fastidiosa M23] gi|28056369|gb|AAO28262.1| phage-related protein [Xylella fastidiosa Temecula1] gi|28057180|gb|AAO29045.1| phage-related protein [Xylella fastidiosa Temecula1] gi|182631046|gb|ACB91822.1| SNF2-related protein [Xylella fastidiosa M23] gi|182631918|gb|ACB92694.1| SNF2-related protein [Xylella fastidiosa M23] gi|307579404|gb|ADN63373.1| SNF2-related protein [Xylella fastidiosa subsp. fastidiosa GB514] Length = 472 Score = 284 bits (728), Expect = 4e-75, Method: Composition-based stats. Identities = 118/202 (58%), Positives = 157/202 (77%), Gaps = 2/202 (0%) Query: 2 KQYHKFQRELYCDLQ-GENIEAFNSASKTVKCLQLANGAVYYDEEKH-WKEVHDEKIKAL 59 + Y +++++ L+ G +EAFN+ASKT+KCLQLANGA+Y D+ + W+ VHD K++AL Sbjct: 257 RLYKAMEQDMFIALECGAEVEAFNAASKTIKCLQLANGALYTDDTRQAWEVVHDAKLEAL 316 Query: 60 EVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASC 119 IIE+A P++VAYHF SD+ARLQ+AFP+GR LDK P TI++WN G IP+LFAHPAS Sbjct: 317 HDIIEEAAGMPVLVAYHFKSDVARLQRAFPKGRALDKHPDTIRDWNAGNIPVLFAHPASA 376 Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 GHGLNLQ GGNIL FF WWDLE++QQ+IERIG TRQ QAG R VF+++++A T+DEL Sbjct: 377 GHGLNLQDGGNILAFFGHWWDLEQYQQIIERIGPTRQAQAGHTRPVFIHHIVAAGTVDEL 436 Query: 180 VLQRLRTKSTIQDLLLNALKKE 201 V+ R +K +QDLLL A+K+ Sbjct: 437 VMARRESKREVQDLLLEAVKRR 458 >gi|28199605|ref|NP_779919.1| hypothetical protein PD1730 [Xylella fastidiosa Temecula1] gi|182682346|ref|YP_001830506.1| SNF2-related protein [Xylella fastidiosa M23] gi|28057720|gb|AAO29568.1| phage-related protein [Xylella fastidiosa Temecula1] gi|182632456|gb|ACB93232.1| SNF2-related protein [Xylella fastidiosa M23] gi|307578627|gb|ADN62596.1| SNF2-related protein [Xylella fastidiosa subsp. fastidiosa GB514] Length = 472 Score = 284 bits (728), Expect = 4e-75, Method: Composition-based stats. Identities = 118/202 (58%), Positives = 158/202 (78%), Gaps = 2/202 (0%) Query: 2 KQYHKFQRELYCDLQ-GENIEAFNSASKTVKCLQLANGAVYYDEEKH-WKEVHDEKIKAL 59 + Y +++++ L+ G +EAFN+ASKT+KCLQLANGA+Y D+ + W+ VHD K++AL Sbjct: 257 RLYKAMEQDMFIALECGAEVEAFNAASKTIKCLQLANGALYTDDTRQAWEVVHDAKLEAL 316 Query: 60 EVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASC 119 IIE+A P++VAYHF SD+ARLQ+AFP+GR LDK P TI++WN G IP+LFAHPAS Sbjct: 317 HDIIEEAAGMPVLVAYHFKSDVARLQRAFPKGRALDKHPDTIRDWNAGNIPVLFAHPASA 376 Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 GHGLNLQ GGNIL FF WWDLE++QQ+IERIG TRQ QAG +R VF+++++A T+DEL Sbjct: 377 GHGLNLQDGGNILAFFGHWWDLEQYQQIIERIGPTRQAQAGHQRPVFIHHIVAAGTVDEL 436 Query: 180 VLQRLRTKSTIQDLLLNALKKE 201 V+ R +K +QDLLL A+K+ Sbjct: 437 VMARRESKREVQDLLLEAVKRR 458 >gi|48697218|ref|YP_024948.1| putative helicase protein [Burkholderia phage BcepC6B] gi|47779024|gb|AAT38387.1| gp28 [Burkholderia phage BcepC6B] Length = 459 Score = 284 bits (727), Expect = 4e-75, Method: Composition-based stats. Identities = 117/206 (56%), Positives = 157/206 (76%), Gaps = 5/206 (2%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEK-----HWKEVHDEKI 56 + Y +R+++ ++ IEA N+ASKT+KCLQLANGAVY E+ W EVHD K+ Sbjct: 252 RLYRDMERQMFMEIDDSPIEAMNAASKTMKCLQLANGAVYKQEDDGSDTAPWHEVHDLKL 311 Query: 57 KALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHP 116 +ALE I+E+A P++VAYHF SDLARLQ+AFP+GR LD++P TI++WN GKIP++FAHP Sbjct: 312 QALEEIVEEAAGMPVLVAYHFKSDLARLQRAFPRGRQLDQNPQTIRDWNAGKIPVMFAHP 371 Query: 117 ASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTI 176 AS GHGLNLQ GGNIL F WW+LEE+ Q++ERIG RQ QAG +R VF+Y +IA++TI Sbjct: 372 ASAGHGLNLQDGGNILAVFGHWWNLEEYLQIVERIGPVRQLQAGHRRPVFIYPIIARDTI 431 Query: 177 DELVLQRLRTKSTIQDLLLNALKKET 202 DE V++R TK +QD+LL+A+K+ Sbjct: 432 DEDVVERRETKRAVQDILLDAMKRRA 457 >gi|71901494|ref|ZP_00683581.1| SNF2-related [Xylella fastidiosa Ann-1] gi|71728750|gb|EAO30894.1| SNF2-related [Xylella fastidiosa Ann-1] Length = 464 Score = 284 bits (727), Expect = 5e-75, Method: Composition-based stats. Identities = 118/202 (58%), Positives = 159/202 (78%), Gaps = 2/202 (0%) Query: 2 KQYHKFQRELYCDLQ-GENIEAFNSASKTVKCLQLANGAVYYDEEKH-WKEVHDEKIKAL 59 + Y +++++ L+ G +EAFN+ASKT+KCLQLANGA+Y D+ + W+ VHD K++AL Sbjct: 257 RLYKAMEQDMFIALECGAEVEAFNAASKTIKCLQLANGALYTDDTRQAWEVVHDAKLEAL 316 Query: 60 EVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASC 119 IIE+A P++VAYHF SD+ARLQ+AFP+GR LDK P TI++WN G IP+LFAHPAS Sbjct: 317 HDIIEEAAGMPVLVAYHFKSDVARLQRAFPKGRALDKHPDTIRDWNAGNIPVLFAHPASA 376 Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 GHGLNLQ GGNILVFF WWDLE++QQ+IERIG TRQ QAG R VF+++++A T+DEL Sbjct: 377 GHGLNLQDGGNILVFFGHWWDLEQYQQIIERIGPTRQAQAGHTRPVFIHHIVAAGTVDEL 436 Query: 180 VLQRLRTKSTIQDLLLNALKKE 201 V+ R +K +QDLLL A++++ Sbjct: 437 VMARRESKREVQDLLLEAVRRK 458 >gi|273810423|ref|YP_003344894.1| helicase [Xylella phage Xfas53] gi|257097798|gb|ACV41104.1| helicase [Xylella phage Xfas53] Length = 472 Score = 284 bits (726), Expect = 6e-75, Method: Composition-based stats. Identities = 118/202 (58%), Positives = 158/202 (78%), Gaps = 2/202 (0%) Query: 2 KQYHKFQRELYCDLQ-GENIEAFNSASKTVKCLQLANGAVYYDEEKH-WKEVHDEKIKAL 59 + Y +++++ L+ G +EAFN+ASKT+KCLQLANGA+Y D+ + W+ VHD K++AL Sbjct: 257 RLYKAMEQDMFIALECGAEVEAFNAASKTIKCLQLANGALYTDDTRQAWEVVHDAKLEAL 316 Query: 60 EVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASC 119 IIE+A P++VAYHF SD+ARLQ+AFP+GR LDK P TI++WN G IP+LFAHPAS Sbjct: 317 HDIIEEAAGMPVLVAYHFKSDVARLQRAFPKGRALDKHPDTIRDWNAGNIPVLFAHPASA 376 Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 GHGLNLQ GGNIL FF WWDLE++QQ+IERIG TRQ QAG +R VF+++++A T+DEL Sbjct: 377 GHGLNLQDGGNILAFFGHWWDLEQYQQIIERIGPTRQAQAGHQRPVFIHHIVAAGTVDEL 436 Query: 180 VLQRLRTKSTIQDLLLNALKKE 201 V+ R +K +QDLLL A+K+ Sbjct: 437 VMARRESKREVQDLLLEAVKRR 458 >gi|9633588|ref|NP_051002.1| hypothetical protein APSE-1_41 [Acyrthosiphon pisum bacteriophage APSE-1] gi|9910955|sp|Q9T1Q7|VP41_BPAPS RecName: Full=Putative protein p41 gi|6118036|gb|AAF03984.1|AF157835_41 P41 [Endosymbiont phage APSE-1] Length = 460 Score = 284 bits (726), Expect = 6e-75, Method: Composition-based stats. Identities = 115/200 (57%), Positives = 159/200 (79%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEV 61 YH ++EL+ +L IEA N+A+KT+K LQ+A+GA+Y D+ ++W E+HD KI+ALE Sbjct: 261 AHYHAMEKELFLELGESAIEALNAAAKTIKILQIASGAIYSDDNRNWTEIHDAKIQALES 320 Query: 62 IIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGH 121 I+ ++ P++VAYH+ DL RL KAFP+G+ LD +P T+ +WN GKIPLLFAHPASCGH Sbjct: 321 IVNESGGTPVLVAYHWKHDLERLLKAFPKGKNLDANPRTLTDWNNGKIPLLFAHPASCGH 380 Query: 122 GLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVL 181 GLNLQ GGNILVFFS WWDLE++QQ+IERIG TRQ QAG R VF+++++A++T+DE+V+ Sbjct: 381 GLNLQDGGNILVFFSHWWDLEQYQQIIERIGPTRQAQAGHNRPVFIHHIVAKDTLDEVVM 440 Query: 182 QRLRTKSTIQDLLLNALKKE 201 +R +K IQDLLL A+K++ Sbjct: 441 ERRNSKRAIQDLLLEAMKRK 460 >gi|71274496|ref|ZP_00650784.1| SNF2-related [Xylella fastidiosa Dixon] gi|71900325|ref|ZP_00682460.1| SNF2-related [Xylella fastidiosa Ann-1] gi|71164228|gb|EAO13942.1| SNF2-related [Xylella fastidiosa Dixon] gi|71729900|gb|EAO31996.1| SNF2-related [Xylella fastidiosa Ann-1] Length = 472 Score = 283 bits (725), Expect = 8e-75, Method: Composition-based stats. Identities = 119/202 (58%), Positives = 159/202 (78%), Gaps = 2/202 (0%) Query: 2 KQYHKFQRELYCDLQ-GENIEAFNSASKTVKCLQLANGAVYYDEEKH-WKEVHDEKIKAL 59 + Y +++++ L+ G +EAFN+ASKT+KCLQLANGA+Y D+ + W+ VHD K++AL Sbjct: 257 RLYKAMEQDMFIALECGAEVEAFNAASKTIKCLQLANGALYTDDTRQAWEVVHDAKLEAL 316 Query: 60 EVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASC 119 IIE+A P++VAYHF SD+ARLQ+AFP+GR LDK+P TI++WN G IP+LFAHPAS Sbjct: 317 HDIIEEAAGMPVLVAYHFKSDVARLQRAFPKGRALDKNPDTIRDWNAGNIPVLFAHPASA 376 Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 GHGLNLQ GGNIL FF WWDLE++QQ+IERIG TRQ QAG R VF+++++A NT+DEL Sbjct: 377 GHGLNLQDGGNILAFFGHWWDLEQYQQIIERIGPTRQAQAGHTRPVFIHHIVAANTVDEL 436 Query: 180 VLQRLRTKSTIQDLLLNALKKE 201 V+ R +K +QDLLL A+K+ Sbjct: 437 VMARRESKREVQDLLLEAVKRR 458 >gi|15837282|ref|NP_297970.1| hypothetical protein XF0680 [Xylella fastidiosa 9a5c] gi|9105562|gb|AAF83490.1|AE003912_2 phage-related protein [Xylella fastidiosa 9a5c] Length = 472 Score = 282 bits (722), Expect = 2e-74, Method: Composition-based stats. Identities = 117/201 (58%), Positives = 157/201 (78%), Gaps = 2/201 (0%) Query: 2 KQYHKFQRELYCDLQ-GENIEAFNSASKTVKCLQLANGAVYYDEEKH-WKEVHDEKIKAL 59 + Y ++E++ L+ G +EAFN+ASKT+KCLQLANGA+Y D+ + W+ VHD K++AL Sbjct: 257 RLYKAMEQEMFIALECGAEVEAFNAASKTIKCLQLANGALYTDDTRQAWEVVHDAKLEAL 316 Query: 60 EVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASC 119 IIE+A P++VAYHF SD+ RLQ+AFP+GR LD+ P TI++WN G IP+LFAHPAS Sbjct: 317 HEIIEEAAGMPVLVAYHFKSDVTRLQRAFPKGRVLDQHPDTIRDWNAGNIPVLFAHPASA 376 Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 GHGLNLQ GGNIL FF WWDLE++QQ++ERIG TRQ QAG R VF+++++A NT+DEL Sbjct: 377 GHGLNLQDGGNILAFFGHWWDLEQYQQIVERIGPTRQAQAGHDRPVFIHHIVAANTVDEL 436 Query: 180 VLQRLRTKSTIQDLLLNALKK 200 V+ R +K +QDLLL A+K+ Sbjct: 437 VMARRESKREVQDLLLEAVKR 457 >gi|15839118|ref|NP_299806.1| hypothetical protein XF2528 [Xylella fastidiosa 9a5c] gi|9107736|gb|AAF85326.1|AE004060_1 phage-related protein [Xylella fastidiosa 9a5c] Length = 472 Score = 281 bits (719), Expect = 4e-74, Method: Composition-based stats. Identities = 116/202 (57%), Positives = 155/202 (76%), Gaps = 2/202 (0%) Query: 2 KQYHKFQRELYCDLQ-GENIEAFNSASKTVKCLQLANGAVYYDEEKH-WKEVHDEKIKAL 59 + Y ++E+ L+ G +EAFN+ASKT+KCLQLANGA+Y D+ + W+ VHD K++AL Sbjct: 257 RLYKTMEQEMLIALECGAEVEAFNAASKTIKCLQLANGALYTDDTRQAWEVVHDAKLEAL 316 Query: 60 EVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASC 119 IIE+A P++VAYHF SD+ARLQ+AFP+GR LD+ P T+++WN G IP+LF HPAS Sbjct: 317 HEIIEEAAGMPVLVAYHFKSDVARLQRAFPKGRVLDQHPDTLRDWNAGNIPVLFVHPASA 376 Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 GHGLNLQ GGNIL FF WWDLE++QQ+IERIG TRQ QAG R VF+++++A T+DEL Sbjct: 377 GHGLNLQDGGNILAFFGHWWDLEQYQQIIERIGPTRQAQAGHDRPVFIHHIVAAGTVDEL 436 Query: 180 VLQRLRTKSTIQDLLLNALKKE 201 V+ R +K +QDLLL A+K+ Sbjct: 437 VMARRESKREVQDLLLEAVKRR 458 >gi|170730331|ref|YP_001775764.1| hypothetical protein Xfasm12_1183 [Xylella fastidiosa M12] gi|167965124|gb|ACA12134.1| conserved hypothetical protein [Xylella fastidiosa M12] Length = 295 Score = 281 bits (718), Expect = 6e-74, Method: Composition-based stats. Identities = 118/202 (58%), Positives = 158/202 (78%), Gaps = 2/202 (0%) Query: 2 KQYHKFQRELYCDLQ-GENIEAFNSASKTVKCLQLANGAVYYDEEKH-WKEVHDEKIKAL 59 + Y +++++ L+ G +EAFN+ASKT+KCLQLANGA+Y D+ + W+ VHD K++AL Sbjct: 80 RLYKAMEQDMFIALECGAEVEAFNAASKTIKCLQLANGALYTDDTRQAWEVVHDAKLEAL 139 Query: 60 EVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASC 119 IIE+A P++VAYHF SD+ARLQ+AFP+GR LDK+P TI++WN G IP+LFAHPAS Sbjct: 140 HDIIEEAAGMPVLVAYHFKSDVARLQRAFPKGRALDKNPDTIRDWNAGNIPVLFAHPASA 199 Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 GHGLNLQ GGNIL FF WWDLE++QQ+IERIG TRQ QAG R VF+++++A T+DEL Sbjct: 200 GHGLNLQDGGNILAFFGHWWDLEQYQQIIERIGPTRQAQAGHTRPVFIHHIVAAGTVDEL 259 Query: 180 VLQRLRTKSTIQDLLLNALKKE 201 V+ R +K +QDLLL A+K+ Sbjct: 260 VMARRESKREVQDLLLEAVKRR 281 >gi|315121969|ref|YP_004062458.1| SNF2 related protein [Candidatus Liberibacter solanacearum CLso-ZC1] gi|313495371|gb|ADR51970.1| SNF2 related protein [Candidatus Liberibacter solanacearum CLso-ZC1] Length = 456 Score = 280 bits (716), Expect = 1e-73, Method: Composition-based stats. Identities = 151/200 (75%), Positives = 178/200 (89%) Query: 1 MKQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 +K Y KFQREL+C++QGE + AFNSASKTVKCLQLANGAVY DE WKEVH+ KI+AL+ Sbjct: 255 LKLYRKFQRELFCEIQGEPLVAFNSASKTVKCLQLANGAVYTDENHSWKEVHNAKIEALK 314 Query: 61 VIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCG 120 I+E+A P++VAYHFNSDL RL KAFPQGR LDK+P TI++WN GKIPLLFAHPASC Sbjct: 315 AIVEEAGGCPLLVAYHFNSDLMRLFKAFPQGRHLDKNPQTIKDWNAGKIPLLFAHPASCA 374 Query: 121 HGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELV 180 HGLNLQYGGNILVFFSLWWDLE HQQMIERIG RQ+QAGFKRAVF++YLIA++TIDEL+ Sbjct: 375 HGLNLQYGGNILVFFSLWWDLETHQQMIERIGPLRQKQAGFKRAVFIHYLIAEHTIDELI 434 Query: 181 LQRLRTKSTIQDLLLNALKK 200 L+RL+TK+T+Q++LLNALKK Sbjct: 435 LKRLQTKATVQEILLNALKK 454 >gi|212499736|ref|YP_002308544.1| DEAD box helicase [Bacteriophage APSE-2] gi|238898727|ref|YP_002924408.1| APSE-2 prophage; DEAD box helicase [Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum)] gi|75906050|gb|ABA29396.1| DEAD box helicase [Bacteriophage APSE-2] gi|211731705|gb|ACJ10193.1| DEAD box helicase [Bacteriophage APSE-2] gi|229466486|gb|ACQ68260.1| APSE-2 prophage; DEAD box helicase [Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum)] Length = 460 Score = 279 bits (715), Expect = 1e-73, Method: Composition-based stats. Identities = 113/200 (56%), Positives = 154/200 (77%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEV 61 Y ++EL+ +L IEA N+A+KT+K LQ+A GA+Y D+ +W +HD KI+ALE Sbjct: 261 AHYQAMEKELFLELGDSAIEALNAAAKTIKTLQIAAGAIYSDDNHNWTAIHDAKIQALES 320 Query: 62 IIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGH 121 I+ ++ P++VAYH+ DL RL KAFP+G+ LD +P T+ WN GKIPLLFAHPASCGH Sbjct: 321 IVNESGGTPVLVAYHWKHDLERLLKAFPKGKMLDANPQTLTNWNSGKIPLLFAHPASCGH 380 Query: 122 GLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVL 181 GLNLQ GGNILVFFS WWDLE++QQ+IERIG TRQ QAG R VF+++++A++T+DE+V+ Sbjct: 381 GLNLQDGGNILVFFSHWWDLEQYQQIIERIGPTRQAQAGHNRPVFIHHIVAKDTLDEVVM 440 Query: 182 QRLRTKSTIQDLLLNALKKE 201 +R +K IQDLLL A+K++ Sbjct: 441 ERRNSKRAIQDLLLEAMKRK 460 >gi|41179407|ref|NP_958716.1| Bbp47 [Bordetella phage BPP-1] gi|45569539|ref|NP_996608.1| DEAD box helicase [Bordetella phage BMP-1] gi|45580790|ref|NP_996656.1| DEAD box helicase [Bordetella phage BIP-1] gi|40950146|gb|AAR97712.1| Bbp47 [Bordetella phage BPP-1] Length = 464 Score = 279 bits (715), Expect = 1e-73, Method: Composition-based stats. Identities = 124/202 (61%), Positives = 158/202 (78%), Gaps = 2/202 (0%) Query: 2 KQYHKFQRELYCDLQ-GENIEAFNSASKTVKCLQLANGAVYYDEE-KHWKEVHDEKIKAL 59 + Y +RE + L+ G IEAFN+ASKT+KCLQLANGA+Y D+ W +VHD K++AL Sbjct: 261 RLYRDMEREAFLALECGIEIEAFNAASKTIKCLQLANGAIYTDDTATTWADVHDVKLQAL 320 Query: 60 EVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASC 119 E I+ +A P++VAYHF SDLARLQ+AFPQGR LD++P TI++WN GKIPLLFAHPAS Sbjct: 321 ESIVAEAAGMPVLVAYHFKSDLARLQRAFPQGRALDQNPQTIRDWNAGKIPLLFAHPASA 380 Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 GHGLNLQ GGNIL FF WWDLE++QQ+IERIG TRQ QAG R VF+Y+++A +T+DEL Sbjct: 381 GHGLNLQDGGNILAFFGHWWDLEQYQQIIERIGPTRQAQAGHDRPVFIYHIVATDTMDEL 440 Query: 180 VLQRLRTKSTIQDLLLNALKKE 201 V+ R +K +QDLLL A+K+ Sbjct: 441 VMARRESKREVQDLLLEAMKRR 462 >gi|315122937|ref|YP_004063426.1| SNF2 related protein [Candidatus Liberibacter solanacearum CLso-ZC1] gi|313496339|gb|ADR52938.1| SNF2 related protein [Candidatus Liberibacter solanacearum CLso-ZC1] Length = 456 Score = 278 bits (712), Expect = 3e-73, Method: Composition-based stats. Identities = 151/200 (75%), Positives = 179/200 (89%) Query: 1 MKQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 +K Y KFQREL+C++QGE + AFNSASKTVKCLQLANGAVY DE WKEVH+ KI+AL+ Sbjct: 255 LKLYRKFQRELFCEIQGEPLVAFNSASKTVKCLQLANGAVYTDESHSWKEVHNAKIEALK 314 Query: 61 VIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCG 120 I+E+A +P++VAYHFNSDL RL KAFPQGR LDK+P TI++WN GKIPLLFAHPASC Sbjct: 315 AIVEEAGRSPVLVAYHFNSDLMRLFKAFPQGRHLDKNPQTIKDWNAGKIPLLFAHPASCA 374 Query: 121 HGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELV 180 HGLNLQYGGNILVFFSLWWDLE HQQMIERIG RQ+QAGFKRAVF++YLIA++TIDEL+ Sbjct: 375 HGLNLQYGGNILVFFSLWWDLETHQQMIERIGTLRQKQAGFKRAVFIHYLIAEHTIDELI 434 Query: 181 LQRLRTKSTIQDLLLNALKK 200 L+RL+TK+T+Q++LLNALKK Sbjct: 435 LKRLQTKATVQEILLNALKK 454 >gi|313618477|gb|EFR90480.1| putative protein p41 [Listeria innocua FSL S4-378] Length = 450 Score = 273 bits (699), Expect = 8e-72, Method: Composition-based stats. Identities = 86/199 (43%), Positives = 123/199 (61%), Gaps = 8/199 (4%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEV 61 K Y F+ ++ +L + I+A N+A + K LQ+ANGAVY D E +HD+K+ ALE Sbjct: 254 KVYSDFKEDMVANLGDDEIDAVNAAVLSGKLLQMANGAVY-DSENKAHVIHDKKLDALED 312 Query: 62 IIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGH 121 +IE AN P++VAY F DL R++ FP + + I++WN+GKIP+ HPAS GH Sbjct: 313 LIEGANGKPVLVAYWFKHDLERIKNRFPVRKI--QSSKDIEDWNDGKIPIAVIHPASAGH 370 Query: 122 GLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVL 181 GLNLQ GG+ L++F L W LE +QQ R+ + G + V V+++I +NTIDE VL Sbjct: 371 GLNLQSGGSTLIWFGLTWSLELYQQTNARL-----YRQGQRDTVIVHHIITKNTIDEDVL 425 Query: 182 QRLRTKSTIQDLLLNALKK 200 L K QD L++A+K Sbjct: 426 LALTKKEKTQDALIDAVKA 444 >gi|300853544|ref|YP_003778528.1| putative phage related DNA helicase [Clostridium ljungdahlii DSM 13528] gi|300433659|gb|ADK13426.1| predicted phage related DNA helicase [Clostridium ljungdahlii DSM 13528] Length = 453 Score = 269 bits (689), Expect = 1e-70, Method: Composition-based stats. Identities = 82/200 (41%), Positives = 122/200 (61%), Gaps = 8/200 (4%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEV 61 K Y +++L L+GE I+A N+A+ + K Q+ANGAVY ++ K +HD+K+ ALE Sbjct: 254 KAYDGMKQDLVLSLKGEEIDAVNAAALSNKLCQMANGAVYGED-KRVFTIHDKKLDALED 312 Query: 62 IIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGH 121 +IE AN P++VAY FN DL R++K F K I+ WN G+I + HPAS GH Sbjct: 313 LIESANGKPVLVAYWFNHDLERIKKRFKVREI--KTSKDIKNWNNGEIEVAVIHPASAGH 370 Query: 122 GLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVL 181 GLNLQ GG+ L++F L W LE +QQ R+ + G V ++++I + TIDE ++ Sbjct: 371 GLNLQAGGSTLIWFGLTWSLELYQQTNARLW-----RQGQNETVVIHHIITKGTIDEDIM 425 Query: 182 QRLRTKSTIQDLLLNALKKE 201 + LR K +Q L+ A+K + Sbjct: 426 RALRRKEKVQSDLIAAVKAK 445 >gi|167630964|ref|YP_001681463.1| phage-associated helicase, snf2 family [Heliobacterium modesticaldum Ice1] gi|167593704|gb|ABZ85452.1| phage-associated helicase, snf2 family [Heliobacterium modesticaldum Ice1] Length = 452 Score = 269 bits (688), Expect = 1e-70, Method: Composition-based stats. Identities = 86/199 (43%), Positives = 122/199 (61%), Gaps = 8/199 (4%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEV 61 K Y +REL L+G+ I+A ++AS + K LQ+ANGAVY D+ +H K+ ALE Sbjct: 254 KVYETMKRELVLSLEGQEIDAGSAASLSNKLLQMANGAVYADD-GSVVNIHGRKLDALED 312 Query: 62 IIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGH 121 I+E AN P+++AY + DL R+ K FP R D I+ WN+G+IP+ HPAS GH Sbjct: 313 ILEAANGKPVLIAYWYKHDLNRILKRFPAERLDSVDS--IRRWNDGEIPVAVIHPASAGH 370 Query: 122 GLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVL 181 GLNLQ GG+ LV+F L W LE +QQ R+ + G K V ++++I + TIDE V+ Sbjct: 371 GLNLQAGGSTLVWFGLTWSLELYQQTNARLW-----RQGQKETVVIHHIITKGTIDEQVM 425 Query: 182 QRLRTKSTIQDLLLNALKK 200 + LR K Q L++A+K Sbjct: 426 KALRLKDKTQTALIDAVKA 444 >gi|298253802|ref|ZP_06977391.1| superfamily II DNA/RNA helicase, SNF2 family [Gardnerella vaginalis 5-1] gi|297532138|gb|EFH71111.1| superfamily II DNA/RNA helicase, SNF2 family [Gardnerella vaginalis 5-1] Length = 479 Score = 269 bits (688), Expect = 2e-70, Method: Composition-based stats. Identities = 84/200 (42%), Positives = 123/200 (61%), Gaps = 8/200 (4%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEV 61 K Y + + ++ L+G+ I+A N+AS + K LQ+A GAVY +E+K +HD K+ ALE Sbjct: 254 KLYDELKADMVVSLEGKEIDAINAASLSNKLLQMAGGAVY-NEKKESVHIHDRKLDALED 312 Query: 62 IIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGH 121 +IE AN P++VAY F DL R++K F K I +WN G IP+ HPAS GH Sbjct: 313 LIEAANGKPVLVAYWFKHDLERIKKRFNVREI--KTSADIADWNAGMIPVALIHPASAGH 370 Query: 122 GLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVL 181 GLNLQ GG+ L++FSL W LE +QQ R+ + G V ++++I +NTIDE V+ Sbjct: 371 GLNLQAGGSTLIWFSLTWSLELYQQTNARLN-----RQGQTSTVVIHHIITKNTIDEDVM 425 Query: 182 QRLRTKSTIQDLLLNALKKE 201 + L K+ +QD L+ ++K Sbjct: 426 RALSMKAKVQDALIESVKAR 445 >gi|323693306|ref|ZP_08107524.1| SNF2 domain-containing protein [Clostridium symbiosum WAL-14673] gi|323502789|gb|EGB18633.1| SNF2 domain-containing protein [Clostridium symbiosum WAL-14673] Length = 447 Score = 269 bits (687), Expect = 2e-70, Method: Composition-based stats. Identities = 86/198 (43%), Positives = 116/198 (58%), Gaps = 7/198 (3%) Query: 3 QYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVI 62 +Y + ++EL +L I A N+AS T K QLANGA+Y D E HD K+ ALE I Sbjct: 255 RYEELKQELVLELPDGEITAANAASLTGKLSQLANGAIYSDTGDT-IEFHDRKLDALEDI 313 Query: 63 IEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHG 122 IE AN P++VAY F DL+R++K F K I +WN GKIP+ HPAS GHG Sbjct: 314 IESANGKPVLVAYWFKHDLSRIKKRFDVREI--KSSKDITDWNAGKIPVAVIHPASAGHG 371 Query: 123 LNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQ 182 LNLQ GG+ L++F L W LE +QQ R+ RQ V + ++I + TIDE +L+ Sbjct: 372 LNLQAGGSTLIWFGLTWSLELYQQTNARL----WRQGQTSGTVVIEHIITKGTIDERILK 427 Query: 183 RLRTKSTIQDLLLNALKK 200 L K Q+ L++A+K Sbjct: 428 ALSKKELTQNALIDAVKA 445 >gi|297242712|ref|ZP_06926650.1| superfamily II DNA/RNA helicase, SNF2 family [Gardnerella vaginalis AMD] gi|296888923|gb|EFH27657.1| superfamily II DNA/RNA helicase, SNF2 family [Gardnerella vaginalis AMD] Length = 479 Score = 268 bits (685), Expect = 3e-70, Method: Composition-based stats. Identities = 83/200 (41%), Positives = 124/200 (62%), Gaps = 8/200 (4%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEV 61 K Y + ++++ L+G+ I+A N+A + K LQ+A GAVY +E+K +HD K+ ALE Sbjct: 254 KLYDELKQDMVVSLEGKEIDAINAAYLSNKLLQMAGGAVY-NEKKESVHIHDRKLDALED 312 Query: 62 IIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGH 121 +IE AN P++VAY F DL R++K F K I +WN G IP+ HPAS GH Sbjct: 313 LIEAANGKPVLVAYWFKHDLERIKKRFNVREI--KTSADIADWNAGMIPVALIHPASAGH 370 Query: 122 GLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVL 181 GLNLQ GG+ L++FSL W LE +QQ R+ + G V ++++I +NTIDE V+ Sbjct: 371 GLNLQAGGSTLIWFSLTWSLELYQQTNARLN-----RQGQTGTVVIHHIITKNTIDEDVM 425 Query: 182 QRLRTKSTIQDLLLNALKKE 201 + L K+ +QD L++++K Sbjct: 426 RALSMKAKVQDALIDSVKAR 445 >gi|331085752|ref|ZP_08334835.1| hypothetical protein HMPREF0987_01138 [Lachnospiraceae bacterium 9_1_43BFAA] gi|330406675|gb|EGG86180.1| hypothetical protein HMPREF0987_01138 [Lachnospiraceae bacterium 9_1_43BFAA] Length = 448 Score = 268 bits (685), Expect = 3e-70, Method: Composition-based stats. Identities = 83/201 (41%), Positives = 122/201 (60%), Gaps = 7/201 (3%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEV 61 K Y F+R++ + E ++A N+A+ + K LQ+ANGAVY ++ K +HD K+ ALE Sbjct: 252 KLYQSFERDMVLSIGEEELDAANAAALSNKLLQMANGAVYGED-KKVISIHDRKLDALED 310 Query: 62 IIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGH 121 ++E AN PI+VAY + DL R+QK P+ R +D I +WN G+I + HPAS GH Sbjct: 311 LVEAANGKPILVAYWYKHDLMRIQKRLPEARVID-TSKDITDWNHGEIAIGLIHPASAGH 369 Query: 122 GLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVL 181 GLNLQ GG +V+F L W LE +QQM R+ + G K V +++LI + T DE V+ Sbjct: 370 GLNLQEGGCTIVWFGLTWSLELYQQMNARLW-----RQGQKHTVVIHHLITKGTHDEDVM 424 Query: 182 QRLRTKSTIQDLLLNALKKET 202 + L K T Q L++A++ Sbjct: 425 KALEKKETGQSALIHAVRARI 445 >gi|313898006|ref|ZP_07831545.1| SNF2 family N-terminal domain protein [Clostridium sp. HGF2] gi|312957034|gb|EFR38663.1| SNF2 family N-terminal domain protein [Clostridium sp. HGF2] Length = 447 Score = 268 bits (685), Expect = 3e-70, Method: Composition-based stats. Identities = 85/200 (42%), Positives = 116/200 (58%), Gaps = 7/200 (3%) Query: 1 MKQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 + +Y + + +L +L I A N+AS T K QLANGA+Y D E HD K+ ALE Sbjct: 253 VARYEELKSDLVLELPDGEITAANAASLTGKLSQLANGAIYSD-TGEIIEFHDRKLDALE 311 Query: 61 VIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCG 120 IIE AN P++VAY F DL+R++K F K I +WN GKIP+ HPAS G Sbjct: 312 DIIESANGKPVLVAYWFKHDLSRIKKRFDVREI--KSSKDITDWNAGKIPVAVIHPASAG 369 Query: 121 HGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELV 180 HGLNLQ GG+ L++F L W LE +QQ R+ RQ V + ++I + TIDE + Sbjct: 370 HGLNLQAGGSTLIWFGLTWSLELYQQTNARL----WRQGQTSGTVVIEHIITKGTIDERI 425 Query: 181 LQRLRTKSTIQDLLLNALKK 200 L+ L K Q+ L++A+K Sbjct: 426 LKALSKKELTQNALIDAVKA 445 >gi|42779467|ref|NP_976714.1| phage-associated helicase [Bacillus cereus ATCC 10987] gi|42735383|gb|AAS39322.1| phage-associated helicase [Bacillus cereus ATCC 10987] Length = 453 Score = 267 bits (684), Expect = 5e-70, Method: Composition-based stats. Identities = 80/198 (40%), Positives = 118/198 (59%), Gaps = 8/198 (4%) Query: 3 QYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVI 62 Y +F+ E+ + E I+A N+A + K LQ+ANGA+Y D++K+ +HD K+ ALE + Sbjct: 255 VYDRFREEMVLEFADEEIDAMNAAVLSGKLLQMANGAIY-DDDKNTHIIHDRKLDALEDL 313 Query: 63 IEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHG 122 IE AN P+++AY +N DL R++ F K I++WN G I + HPAS GHG Sbjct: 314 IEGANGKPVLIAYWYNHDLERIKAKFNVREI--KTSKDIKDWNNGDISVAVIHPASAGHG 371 Query: 123 LNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQ 182 LNLQ GG+ L++F L W LE +QQ R+ + G V ++++I + TIDE V+ Sbjct: 372 LNLQSGGSTLIWFGLTWSLELYQQTNARLW-----RQGQNETVVIHHIITKGTIDEDVMN 426 Query: 183 RLRTKSTIQDLLLNALKK 200 LR K Q L+NA+K Sbjct: 427 ALRRKEKTQSDLINAVKA 444 >gi|220930213|ref|YP_002507122.1| SNF2-related protein [Clostridium cellulolyticum H10] gi|220000541|gb|ACL77142.1| SNF2-related protein [Clostridium cellulolyticum H10] Length = 453 Score = 267 bits (682), Expect = 8e-70, Method: Composition-based stats. Identities = 80/198 (40%), Positives = 117/198 (59%), Gaps = 8/198 (4%) Query: 3 QYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVI 62 Y F+ E+ + E I+A N+A + K LQ+ANGA+Y D++K +HD K+ ALE + Sbjct: 255 VYDHFREEMVLEFGDEEIDAMNAAVLSGKLLQMANGAIY-DDDKKPHIIHDRKLDALEDL 313 Query: 63 IEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHG 122 IE AN P+++AY +N DL R++ F K I++WN G I + HPAS GHG Sbjct: 314 IEGANGKPVLIAYWYNHDLERIKAKFNVREI--KTSKDIKDWNNGDISVAVIHPASAGHG 371 Query: 123 LNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQ 182 LNLQ GG+ L++F L W LE +QQ R+ + G K V ++++I + TIDE V+ Sbjct: 372 LNLQSGGSTLIWFGLTWSLELYQQTNARLW-----RQGQKETVVIHHIITKGTIDEDVMG 426 Query: 183 RLRTKSTIQDLLLNALKK 200 L+ K Q L+NA+K Sbjct: 427 ALKRKEKTQTDLINAVKA 444 >gi|320182116|gb|EFW57020.1| DNA polymerase, phage-associated [Shigella boydii ATCC 9905] Length = 533 Score = 266 bits (680), Expect = 1e-69, Method: Composition-based stats. Identities = 112/187 (59%), Positives = 152/187 (81%) Query: 17 GENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYH 76 E IEA N+A+KT+KCLQ+A+GAVY D+ W E+HD K++AL+ I+ +A AP++VAYH Sbjct: 346 DEGIEAPNAAAKTLKCLQIASGAVYTDDAGSWSELHDTKLQALDSILTEAAGAPVLVAYH 405 Query: 77 FNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFS 136 + DL RL KAFP+GR LD+DP T+++WN GKIP+LFAHPAS GHGLN+Q GG ILVFFS Sbjct: 406 WKHDLERLLKAFPRGRHLDQDPQTLRDWNSGKIPVLFAHPASAGHGLNMQDGGYILVFFS 465 Query: 137 LWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 WWDLE++QQ+IERIG TRQ QAG R VF++++IA +T+DE+V+++ +K T+QD+LL+ Sbjct: 466 HWWDLEQYQQIIERIGPTRQIQAGHNRPVFIHHIIAADTMDEMVMEQRNSKRTVQDILLD 525 Query: 197 ALKKETI 203 A+KK I Sbjct: 526 AMKKRGI 532 >gi|219855697|ref|YP_002472819.1| hypothetical protein CKR_2354 [Clostridium kluyveri NBRC 12016] gi|219569421|dbj|BAH07405.1| hypothetical protein [Clostridium kluyveri NBRC 12016] Length = 469 Score = 266 bits (680), Expect = 1e-69, Method: Composition-based stats. Identities = 80/198 (40%), Positives = 117/198 (59%), Gaps = 8/198 (4%) Query: 3 QYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVI 62 Y F+ E+ + E I+A N+A + K LQ+ANGA+Y D++K+ +HD K+ ALE + Sbjct: 271 VYDHFREEMVFEFADEEIDAMNAAVLSGKLLQMANGAIY-DDDKNTHIIHDRKLDALEDL 329 Query: 63 IEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHG 122 IE AN P+++AY +N DL R++ F K I++WN G I + HPAS GHG Sbjct: 330 IEGANGKPVLIAYWYNHDLERIKAKFNVREI--KTSKDIKDWNNGDISVAVIHPASAGHG 387 Query: 123 LNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQ 182 LNLQ GG+ L++F L W LE +QQ R+ + G V ++++I + TIDE V+ Sbjct: 388 LNLQSGGSTLIWFGLTWSLELYQQTNARLW-----RQGQNETVVIHHIITKGTIDEDVMN 442 Query: 183 RLRTKSTIQDLLLNALKK 200 LR K Q L+NA+K Sbjct: 443 ALRRKEKTQSDLINAVKA 460 >gi|150391738|ref|YP_001321787.1| phage-associated helicase [Alkaliphilus metalliredigens QYMF] gi|149951600|gb|ABR50128.1| phage-associated helicase [Alkaliphilus metalliredigens QYMF] Length = 414 Score = 266 bits (680), Expect = 1e-69, Method: Composition-based stats. Identities = 87/200 (43%), Positives = 122/200 (61%), Gaps = 8/200 (4%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEV 61 Y F+ ++ L E I+A N+A + K LQ+ANGAVY DE+ +HD K+ ALE Sbjct: 218 AIYSGFRDDMVASLGAEEIDAVNAAVLSGKLLQMANGAVY-DEKNKAHFIHDRKLDALED 276 Query: 62 IIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGH 121 +IE AN P+++AY F DL R+QK FP + K I+EWNEG+IP+ HPAS GH Sbjct: 277 LIEGANGKPVLIAYWFKHDLDRIQKRFPARQL--KSSRDIEEWNEGEIPVAVIHPASAGH 334 Query: 122 GLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVL 181 GLNLQ GG+ LV+F L W LE +QQ R+ + G K V ++++I ++TIDE V+ Sbjct: 335 GLNLQSGGSTLVWFGLTWSLELYQQTNARL-----YRQGQKDTVVIHHIITKDTIDEDVM 389 Query: 182 QRLRTKSTIQDLLLNALKKE 201 L K Q L++A+K + Sbjct: 390 TALTKKEKTQASLIDAVKAK 409 >gi|323484110|ref|ZP_08089480.1| SNF2-like protein [Clostridium symbiosum WAL-14163] gi|323402552|gb|EGA94880.1| SNF2-like protein [Clostridium symbiosum WAL-14163] Length = 455 Score = 265 bits (678), Expect = 2e-69, Method: Composition-based stats. Identities = 78/202 (38%), Positives = 121/202 (59%), Gaps = 8/202 (3%) Query: 1 MKQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 M YH+ ++++ + +I+A N+A + K +Q+ANGAVY DE K +HD K++ALE Sbjct: 251 MNLYHQLEKDMLVPYEDGDIDAVNAAGLSNKLMQMANGAVY-DENGAVKHIHDRKLEALE 309 Query: 61 VIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCG 120 ++E AN P++VAY + DLAR++ ++WN G+IP+ HPAS G Sbjct: 310 DLVEAANGKPVLVAYWYKHDLARIRDRLGVAEL--DAAEDFRKWNAGEIPVAVIHPASAG 367 Query: 121 HGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELV 180 HGLNLQ GG+ L++F L W LE +QQM R+ + G K V +++LIA++T+DE V Sbjct: 368 HGLNLQTGGSTLIWFGLTWSLELYQQMNARLW-----RQGQKETVVIHHLIAKDTLDERV 422 Query: 181 LQRLRTKSTIQDLLLNALKKET 202 + L K Q L++A++ Sbjct: 423 MTALEKKDCGQSALVDAVRARI 444 >gi|167039884|ref|YP_001662869.1| SNF2-related protein [Thermoanaerobacter sp. X514] gi|300915304|ref|ZP_07132618.1| SNF2-related protein [Thermoanaerobacter sp. X561] gi|307724792|ref|YP_003904543.1| SNF2-like protein [Thermoanaerobacter sp. X513] gi|166854124|gb|ABY92533.1| SNF2-related protein [Thermoanaerobacter sp. X514] gi|300888580|gb|EFK83728.1| SNF2-related protein [Thermoanaerobacter sp. X561] gi|307581853|gb|ADN55252.1| SNF2-related protein [Thermoanaerobacter sp. X513] Length = 449 Score = 265 bits (678), Expect = 2e-69, Method: Composition-based stats. Identities = 84/200 (42%), Positives = 125/200 (62%), Gaps = 8/200 (4%) Query: 1 MKQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 MK +R+L +++GE + A N+A+ + K LQ+ANGAVY D+ +HD K+ ALE Sbjct: 253 MKTLDTMKRDLITNVKGEEVTAANAAALSGKLLQMANGAVY-DDHGTVLYIHDRKLDALE 311 Query: 61 VIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCG 120 +IE AN P+++AY F DL+R+QK F + +I+ WN+G+IP+ HPAS G Sbjct: 312 DLIEAANGKPVLIAYWFKHDLSRIQKRFE--VEVLSTSDSIKRWNDGEIPIAVIHPASAG 369 Query: 121 HGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELV 180 HGLNLQ GG+ LV+F L W LE +QQ R+ + G K V +++LI++ TIDE V Sbjct: 370 HGLNLQAGGSTLVWFGLTWSLELYQQTNARLW-----RQGQKETVVIHHLISKGTIDERV 424 Query: 181 LQRLRTKSTIQDLLLNALKK 200 ++ L K+ Q L++A+K Sbjct: 425 MKALNDKNNTQSALIDAVKA 444 >gi|153955274|ref|YP_001396039.1| Phage-related DNA helicase [Clostridium kluyveri DSM 555] gi|146348132|gb|EDK34668.1| Predicted Phage-related DNA helicase [Clostridium kluyveri DSM 555] Length = 453 Score = 265 bits (677), Expect = 3e-69, Method: Composition-based stats. Identities = 80/198 (40%), Positives = 117/198 (59%), Gaps = 8/198 (4%) Query: 3 QYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVI 62 Y F+ E+ + E I+A N+A + K LQ+ANGA+Y D++K+ +HD K+ ALE + Sbjct: 255 VYDHFREEMVFEFADEEIDAMNAAVLSGKLLQMANGAIY-DDDKNTHIIHDRKLDALEDL 313 Query: 63 IEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHG 122 IE AN P+++AY +N DL R++ F K I++WN G I + HPAS GHG Sbjct: 314 IEGANGKPVLIAYWYNHDLERIKAKFNVREI--KTSKDIKDWNNGDISVAVIHPASAGHG 371 Query: 123 LNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQ 182 LNLQ GG+ L++F L W LE +QQ R+ + G V ++++I + TIDE V+ Sbjct: 372 LNLQSGGSTLIWFGLTWSLELYQQTNARLW-----RQGQNETVVIHHIITKGTIDEDVMN 426 Query: 183 RLRTKSTIQDLLLNALKK 200 LR K Q L+NA+K Sbjct: 427 ALRRKEKTQSDLINAVKA 444 >gi|197303505|ref|ZP_03168544.1| hypothetical protein RUMLAC_02227 [Ruminococcus lactaris ATCC 29176] gi|197297503|gb|EDY32064.1| hypothetical protein RUMLAC_02227 [Ruminococcus lactaris ATCC 29176] Length = 333 Score = 263 bits (672), Expect = 1e-68, Method: Composition-based stats. Identities = 81/205 (39%), Positives = 120/205 (58%), Gaps = 8/205 (3%) Query: 3 QYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVI 62 Y + E++ L+ I A N+A+ + K LQ+ANGAVY D+ ++HD+K+ ALE + Sbjct: 132 LYDDMEAEMFLPLRTGEITAANAAALSGKLLQMANGAVYSDDGDE-IQIHDQKLDALEDL 190 Query: 63 IEKANAAPIIVAYHFNSDLARLQKAFPQGR---TLDKDPCTIQEWNEGKIPLLFAHPASC 119 IE AN P++VAY F DL R+++ + + +I++WN G++P+ HPAS Sbjct: 191 IEAANGKPVMVAYWFKHDLTRIRRRLSERKISFEKLDSEESIRKWNRGELPVALIHPASA 250 Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 GHGLNLQ GGNIL++F L W LE +QQ + R+ RQ V V ++I TIDE Sbjct: 251 GHGLNLQSGGNILIWFGLTWSLELYQQTVARL----WRQGQSAETVVVQHIITAGTIDED 306 Query: 180 VLQRLRTKSTIQDLLLNALKKETIH 204 V++ L K Q+ L+ A+K H Sbjct: 307 VMKALANKDMTQNRLIAAVKARVTH 331 >gi|194432044|ref|ZP_03064333.1| Bbp42 [Shigella dysenteriae 1012] gi|194419573|gb|EDX35653.1| Bbp42 [Shigella dysenteriae 1012] gi|332089212|gb|EGI94319.1| DNA polymerase [Shigella dysenteriae 155-74] Length = 449 Score = 262 bits (671), Expect = 2e-68, Method: Composition-based stats. Identities = 111/187 (59%), Positives = 152/187 (81%) Query: 17 GENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYH 76 E IEA N+A+KT+KCLQ+A+GAVY D+ W E+HD K++AL+ I+ +A AP++VAYH Sbjct: 262 DEGIEAPNAAAKTLKCLQIASGAVYTDDAGSWSELHDTKLQALDSILTEAAGAPVLVAYH 321 Query: 77 FNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFS 136 + DL RL KAFP+GR LD+DP T+++WN GKIP+LFAHPAS GHGLN+Q GG ILVFFS Sbjct: 322 WKHDLERLLKAFPRGRHLDQDPQTLRDWNSGKIPVLFAHPASAGHGLNMQDGGYILVFFS 381 Query: 137 LWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 WWDLE++QQ+IERIG TRQ QAG R VF++++IA +T+DE+V+++ +K T+Q++LL+ Sbjct: 382 HWWDLEQYQQIIERIGPTRQIQAGHNRPVFIHHIIAADTMDEMVMEQRNSKRTVQNILLD 441 Query: 197 ALKKETI 203 A+KK I Sbjct: 442 AMKKRGI 448 >gi|284048430|ref|YP_003398769.1| SNF2-related protein [Acidaminococcus fermentans DSM 20731] gi|283952651|gb|ADB47454.1| SNF2-related protein [Acidaminococcus fermentans DSM 20731] Length = 449 Score = 262 bits (670), Expect = 2e-68, Method: Composition-based stats. Identities = 84/200 (42%), Positives = 122/200 (61%), Gaps = 7/200 (3%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEV 61 K+Y F++ L +L G + A N+AS T+K Q+ANGA+Y D+ K +HD K+ ALE Sbjct: 252 KRYQDFKKSLVMELPGGEVTAANAASLTLKLTQMANGAIYTDDGKT-IHLHDRKLDALED 310 Query: 62 IIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGH 121 ++E AN P++VAY F D R+ + + R L K +WN GKIP+ HPAS GH Sbjct: 311 LVESANGRPVLVAYWFRHDKERICQRM-EAREL-KSSQDFADWNAGKIPVALIHPASAGH 368 Query: 122 GLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVL 181 GLNLQ GG+IL++F L W LE +QQ + R+ RQ R V V +++ ++TIDE +L Sbjct: 369 GLNLQQGGSILIWFGLTWSLELYQQTVARL----WRQGQESRTVIVQHIVTKSTIDERIL 424 Query: 182 QRLRTKSTIQDLLLNALKKE 201 + L K + Q L+ A+K + Sbjct: 425 KALEKKDSSQAALIEAVKAD 444 >gi|211731851|gb|ACJ10150.1| DEAD box helicase [Bacteriophage APSE-4] Length = 442 Score = 262 bits (670), Expect = 2e-68, Method: Composition-based stats. Identities = 104/182 (57%), Positives = 143/182 (78%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEV 61 YH ++EL+ +L IEA N+A+KT+K LQ+A+GA+Y D+ +W +HD KI+ALE Sbjct: 261 AHYHAMEKELFLELGESAIEALNAAAKTIKILQIASGAIYSDDNHNWTAIHDAKIQALES 320 Query: 62 IIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGH 121 I+ ++ P++VAYH+ DL RL KAFP+G+ LD +P T+ WN GK+PLLFAHPASCGH Sbjct: 321 IVNESGGTPVLVAYHWKHDLERLLKAFPKGKMLDTNPQTLTNWNSGKVPLLFAHPASCGH 380 Query: 122 GLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVL 181 GLNLQ GGNILVFFS WWDLE++QQ+IERIG TRQ QAG R VF+++++A++T+DE+V+ Sbjct: 381 GLNLQDGGNILVFFSHWWDLEQYQQIIERIGPTRQAQAGHNRPVFIHHIVAKDTLDEVVM 440 Query: 182 QR 183 +R Sbjct: 441 ER 442 >gi|57234142|ref|YP_181811.1| SNF2 domain-containing protein [Dehalococcoides ethenogenes 195] gi|57224590|gb|AAW39647.1| SNF2 domain protein [Dehalococcoides ethenogenes 195] Length = 448 Score = 262 bits (670), Expect = 2e-68, Method: Composition-based stats. Identities = 84/201 (41%), Positives = 113/201 (56%), Gaps = 7/201 (3%) Query: 3 QYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVI 62 +Y ++E L + A N+AS T K QLANGA+Y D E HD K+ ALE I Sbjct: 255 RYEDLKQEFILQLPDGEVTAANAASLTGKLSQLANGAIYAD-TGEIIEFHDRKLDALEDI 313 Query: 63 IEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHG 122 IE AN P++VAY F DL+R++ F K I +WN GKIP+ HPAS GHG Sbjct: 314 IEAANEKPLLVAYWFRHDLSRIKNRFNVREI--KTSRDIADWNAGKIPVAVIHPASAGHG 371 Query: 123 LNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQ 182 LNLQ GG+ LV+F L W LE +QQ R+ RQ V + ++I + TIDE +++ Sbjct: 372 LNLQAGGSTLVWFGLTWSLELYQQTNARL----WRQGQESHTVVIQHIITKGTIDERIMR 427 Query: 183 RLRTKSTIQDLLLNALKKETI 203 L K Q L++A+K E + Sbjct: 428 ALTKKELTQSALIDAVKAEVV 448 >gi|227498325|ref|ZP_03928475.1| conserved hypothetical protein [Acidaminococcus sp. D21] gi|226903787|gb|EEH89705.1| conserved hypothetical protein [Acidaminococcus sp. D21] Length = 457 Score = 262 bits (670), Expect = 2e-68, Method: Composition-based stats. Identities = 83/199 (41%), Positives = 123/199 (61%), Gaps = 7/199 (3%) Query: 3 QYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVI 62 +Y + ++ L +L G + A N+AS T+K Q+ANGA+Y D+ K +HD K+ ALE + Sbjct: 253 RYDELKKYLVLELPGGEVTAANAASLTLKLSQMANGAIYTDD-KDVVTIHDRKLDALEDL 311 Query: 63 IEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHG 122 +E AN P++VAY F D R++K + R L K+ +WNEGKIP+ HPAS GHG Sbjct: 312 VESANGKPVLVAYWFKHDKDRIRKRM-EAREL-KESQDFADWNEGKIPVALIHPASAGHG 369 Query: 123 LNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQ 182 LNLQ GG+ILV+F L W +E +QQ R+ RQ + V + +++A++TIDE +L+ Sbjct: 370 LNLQQGGSILVWFGLTWSMELYQQTNARL----WRQGQTDKTVIIQHIVAKSTIDERILK 425 Query: 183 RLRTKSTIQDLLLNALKKE 201 L K Q L+ A+K + Sbjct: 426 VLEHKDGTQSALIEAVKAD 444 >gi|211731857|gb|ACJ10155.1| DEAD box helicase [Bacteriophage APSE-3] Length = 440 Score = 261 bits (668), Expect = 3e-68, Method: Composition-based stats. Identities = 105/180 (58%), Positives = 144/180 (80%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEV 61 YH ++EL+ +L IEA N+A+KT+K LQ+A+GA+Y D+ ++W E+HD KI+ALE Sbjct: 261 AHYHAMEKELFLELGESAIEALNAAAKTIKILQIASGAIYSDDNRNWTEIHDAKIQALES 320 Query: 62 IIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGH 121 I+ ++ P++VAYH+ DL RL KAFP+G+ LD +P T+ +WN GKIPLLFAHPASCGH Sbjct: 321 IVNESGGTPVLVAYHWKHDLERLLKAFPKGKNLDANPRTLTDWNNGKIPLLFAHPASCGH 380 Query: 122 GLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVL 181 GLNLQ GGNILVFFS WWDLE++QQ+IERIG TRQ QAG R VF+++++A++T+DE+V+ Sbjct: 381 GLNLQDGGNILVFFSHWWDLEQYQQIIERIGPTRQAQAGHNRPVFIHHIVAKDTLDEVVM 440 >gi|317132765|ref|YP_004092079.1| SNF2-related protein [Ethanoligenens harbinense YUAN-3] gi|315470744|gb|ADU27348.1| SNF2-related protein [Ethanoligenens harbinense YUAN-3] Length = 450 Score = 261 bits (667), Expect = 4e-68, Method: Composition-based stats. Identities = 85/199 (42%), Positives = 116/199 (58%), Gaps = 7/199 (3%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEV 61 K+Y + + +L +L G+ I A N+A+ T K QLANGA+Y D+ K E HD K+ ALE Sbjct: 256 KRYEELKNDLVLELHGDEITAANAATLTGKLSQLANGAIYSDDGK-IIEFHDRKLDALED 314 Query: 62 IIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGH 121 IIE AN P++VAY F DL R+++ F K I +WN G IP+ HPAS GH Sbjct: 315 IIEAANGKPLLVAYWFRHDLERIRRRFDVREI--KSSQDIDDWNAGNIPVAVIHPASAGH 372 Query: 122 GLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVL 181 GLNLQ GG+ LV+F L W LE +QQ R+ RQ R V + +++ +TID +L Sbjct: 373 GLNLQSGGSTLVWFGLTWSLELYQQTNARL----WRQGQKSRTVVIQHIVTASTIDGQIL 428 Query: 182 QRLRTKSTIQDLLLNALKK 200 L+ K Q L+ A+K Sbjct: 429 NALKHKDKTQSALIAAVKA 447 >gi|154504835|ref|ZP_02041573.1| hypothetical protein RUMGNA_02345 [Ruminococcus gnavus ATCC 29149] gi|153794718|gb|EDN77138.1| hypothetical protein RUMGNA_02345 [Ruminococcus gnavus ATCC 29149] Length = 457 Score = 260 bits (664), Expect = 9e-68, Method: Composition-based stats. Identities = 81/202 (40%), Positives = 124/202 (61%), Gaps = 9/202 (4%) Query: 2 KQYHKFQRELYCDL-QGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 Y + E+ + +G++I+A N+A+ + K Q+ANGAVY DE + + +HD K+ ALE Sbjct: 250 ALYDRMADEMILEYGEGQDIDAVNAAALSNKLQQMANGAVY-DESGNVRNIHDRKLDALE 308 Query: 61 VIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCG 120 +IE AN P++VAY F D R+ K FP R ++ I++WNEGKIP+ HPAS G Sbjct: 309 DLIESANGKPLLVAYWFKHDRERILKRFP-ARDIN-TKKDIEDWNEGKIPVALIHPASAG 366 Query: 121 HGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELV 180 HGLNLQ GG+ +V+FSL W LE +QQ+ R+ + G K V + +L+ + T+DE + Sbjct: 367 HGLNLQEGGSTIVWFSLTWSLELYQQLNARL-----YRQGQKHTVIIEHLVTEGTVDEDI 421 Query: 181 LQRLRTKSTIQDLLLNALKKET 202 L+ + K Q+ ++ A+K Sbjct: 422 LRAIEKKDNTQNAMIEAVKARI 443 >gi|317501093|ref|ZP_07959299.1| SNF2 domain-containing protein [Lachnospiraceae bacterium 8_1_57FAA] gi|316897480|gb|EFV19545.1| SNF2 domain-containing protein [Lachnospiraceae bacterium 8_1_57FAA] Length = 450 Score = 260 bits (664), Expect = 1e-67, Method: Composition-based stats. Identities = 84/199 (42%), Positives = 113/199 (56%), Gaps = 7/199 (3%) Query: 3 QYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVI 62 +Y ++EL L + A N+AS T K QLANGA+Y D E HD K+ ALE I Sbjct: 255 RYEDLKQELILQLPDGEVTAANAASLTGKLSQLANGAIYAD-TGEVIEFHDRKLDALEDI 313 Query: 63 IEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHG 122 IE AN P++VAY F DL+R++ F K I +WN GKIP+ HPAS GHG Sbjct: 314 IEAANEKPLLVAYWFRHDLSRIKNRFNVREI--KTSRDIADWNAGKIPVAVIHPASAGHG 371 Query: 123 LNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQ 182 LNLQ GG+ LV+F L W LE +QQ R+ RQ V + ++I + TIDE +++ Sbjct: 372 LNLQAGGSTLVWFGLTWSLELYQQTNARL----WRQGQESGTVVIQHIITKGTIDERIVK 427 Query: 183 RLRTKSTIQDLLLNALKKE 201 L K Q L++A+K + Sbjct: 428 ALSKKEMTQTALIDAVKAD 446 >gi|71911260|ref|YP_282810.1| phage-related DNA helicase [Streptococcus pyogenes MGAS5005] gi|94989079|ref|YP_597180.1| phage-related DNA helicase [Streptococcus pyogenes MGAS9429] gi|94992970|ref|YP_601069.1| phage-related DNA helicase [Streptococcus pyogenes MGAS2096] gi|71854042|gb|AAZ52065.1| phage-related DNA helicase [Streptococcus pyogenes MGAS5005] gi|94542587|gb|ABF32636.1| phage-related DNA helicase [Streptococcus pyogenes MGAS9429] gi|94546478|gb|ABF36525.1| phage-related DNA helicase [Streptococcus pyogenes MGAS2096] Length = 440 Score = 260 bits (664), Expect = 1e-67, Method: Composition-based stats. Identities = 85/201 (42%), Positives = 125/201 (62%), Gaps = 10/201 (4%) Query: 1 MKQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 MK Y + + +L + + + I A NSA K LQ+ANGA+Y D++K +HD+K+ ALE Sbjct: 247 MKAYKQLEADLVLEFKDKEISAANSAVLANKLLQMANGAIY-DDDKSTVAIHDDKLDALE 305 Query: 61 VIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCG 120 I+E++ PI+V Y + D RL+K FPQ L ++ +WN GKIP+L HP S G Sbjct: 306 DIVEESQGQPILVFYQYQHDFERLKKRFPQAEEL----TSVDKWNSGKIPILLCHPQSAG 361 Query: 121 HGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELV 180 HGLNLQ GG+I+V+F L W LE +QQ R+ + G V V++++A+NT+DE V Sbjct: 362 HGLNLQKGGHIIVWFGLTWSLEYYQQANARLD-----RQGQTEPVIVHHIVAENTVDEKV 416 Query: 181 LQRLRTKSTIQDLLLNALKKE 201 L+ L+ K Q+ LL A+K + Sbjct: 417 LRILQGKEKNQNALLEAVKAQ 437 >gi|167757891|ref|ZP_02430018.1| hypothetical protein CLOSCI_00222 [Clostridium scindens ATCC 35704] gi|167664545|gb|EDS08675.1| hypothetical protein CLOSCI_00222 [Clostridium scindens ATCC 35704] Length = 454 Score = 260 bits (664), Expect = 1e-67, Method: Composition-based stats. Identities = 79/204 (38%), Positives = 114/204 (55%), Gaps = 8/204 (3%) Query: 1 MKQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 +++Y F+R+L L I A N+A+ + K Q+ANGAVY D+ + +HD K+ ALE Sbjct: 253 VQRYVSFKRDLLLQLPDGEITAANAAALSGKLSQMANGAVYTDDGET-IAIHDRKLDALE 311 Query: 61 VIIEKANAAPIIVAYHFNSDLARLQKAFPQGRT---LDKDPCTIQEWNEGKIPLLFAHPA 117 IIE P++VAY F DL R+ + + +I WN G++P+ HPA Sbjct: 312 DIIESMGGKPLLVAYWFRHDLERIAGRLHKLKIPFSRLDSSESIHRWNAGELPVALIHPA 371 Query: 118 SCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 S GHGLNLQ GG+ LV+F L W LE +QQ R+ RQ V V ++I + TID Sbjct: 372 SAGHGLNLQSGGSTLVWFGLTWSLELYQQTNARL----WRQGQQSDTVVVQHIITKGTID 427 Query: 178 ELVLQRLRTKSTIQDLLLNALKKE 201 E +++ L K T Q L+ A+K + Sbjct: 428 ERIMKALSEKDTTQAALIEAVKAD 451 >gi|225573262|ref|ZP_03782017.1| hypothetical protein RUMHYD_01453 [Blautia hydrogenotrophica DSM 10507] gi|225039394|gb|EEG49640.1| hypothetical protein RUMHYD_01453 [Blautia hydrogenotrophica DSM 10507] Length = 454 Score = 259 bits (663), Expect = 1e-67, Method: Composition-based stats. Identities = 79/203 (38%), Positives = 114/203 (56%), Gaps = 8/203 (3%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEV 61 ++Y F+R+L L I A N+A+ + K Q+ANGAVY DE + +HD K+ ALE Sbjct: 254 QRYVSFKRDLLLQLPDGEITAANAAALSGKLSQMANGAVYTDEGET-IAIHDRKLDALED 312 Query: 62 IIEKANAAPIIVAYHFNSDLARLQKAFPQGRT---LDKDPCTIQEWNEGKIPLLFAHPAS 118 IIE P++VAY F DL R+ + + +I+ WN G++P+ HPAS Sbjct: 313 IIESMGGKPLLVAYWFRHDLERITGRLHKLKIPFSRLDSSKSIRRWNSGELPVALIHPAS 372 Query: 119 CGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDE 178 GHGLNLQ GG+ LV+F L W LE +QQ R+ RQ V + ++I + TIDE Sbjct: 373 AGHGLNLQSGGSTLVWFGLTWSLELYQQTNARL----WRQGQQSDIVVIQHIITKGTIDE 428 Query: 179 LVLQRLRTKSTIQDLLLNALKKE 201 +++ L K T Q L+ A+K + Sbjct: 429 RIMKALSEKDTTQAALIEAVKAD 451 >gi|218133421|ref|ZP_03462225.1| hypothetical protein BACPEC_01286 [Bacteroides pectinophilus ATCC 43243] gi|217990796|gb|EEC56802.1| hypothetical protein BACPEC_01286 [Bacteroides pectinophilus ATCC 43243] Length = 457 Score = 259 bits (662), Expect = 2e-67, Method: Composition-based stats. Identities = 82/201 (40%), Positives = 125/201 (62%), Gaps = 9/201 (4%) Query: 3 QYHKFQRELYCDL-QGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEV 61 Y + E+ + +G++I+A N+A+ + K Q+ANGAVY DE + + +HD K+ ALE Sbjct: 251 LYDRMADEMILEYGEGQDIDAVNAAALSNKLQQMANGAVY-DESGNVRNIHDRKLDALED 309 Query: 62 IIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGH 121 +IE AN P++VAY F D R+ K FP R ++ I++WNEGKIP+ HPAS GH Sbjct: 310 LIESANGKPLLVAYWFKHDRERILKRFP-ARDIN-TKKDIEDWNEGKIPVALIHPASAGH 367 Query: 122 GLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVL 181 GLNLQ GG+ +V+FSL W LE +QQ+ R+ + G K V + +L+ + T+DE +L Sbjct: 368 GLNLQEGGSTIVWFSLTWSLELYQQLNARL-----YRQGQKHTVIIEHLVTEGTVDEDIL 422 Query: 182 QRLRTKSTIQDLLLNALKKET 202 + + K T Q+ ++ A+K Sbjct: 423 RAIEKKDTTQNAMIEAVKARI 443 >gi|157311154|ref|YP_001469199.1| helicase [Streptococcus phage P9] gi|119104303|gb|ABL61048.1| helicase [Streptococcus phage P9] Length = 440 Score = 259 bits (662), Expect = 2e-67, Method: Composition-based stats. Identities = 85/201 (42%), Positives = 125/201 (62%), Gaps = 10/201 (4%) Query: 1 MKQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 MK Y + + +L + + + I A NSA K LQ+ANGA+Y D +K +HD+K+ ALE Sbjct: 247 MKAYKQLEADLVLEFKDKEISAANSAVLVNKLLQMANGAIY-DADKTTVAIHDDKLDALE 305 Query: 61 VIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCG 120 I+E++ PI+V Y + DL RL+K FPQ L ++ +WN G+IP+L HP S G Sbjct: 306 DIVEESQGQPILVFYQYQHDLERLKKRFPQAEEL----TSVDKWNSGRIPILLCHPQSAG 361 Query: 121 HGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELV 180 HGLNLQ GG+I+V+F L W LE +QQ R+ + G V V++++A+NT+DE V Sbjct: 362 HGLNLQKGGHIIVWFGLTWSLEYYQQANARLD-----RQGQTEPVIVHHIVAENTVDEKV 416 Query: 181 LQRLRTKSTIQDLLLNALKKE 201 L+ L+ K Q+ LL A+K + Sbjct: 417 LRILQGKEKNQNALLEAVKAQ 437 >gi|211731841|gb|ACJ10144.1| DEAD box helicase [Bacteriophage APSE-5] Length = 440 Score = 258 bits (660), Expect = 3e-67, Method: Composition-based stats. Identities = 103/180 (57%), Positives = 140/180 (77%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEV 61 Y ++EL+ +L IEA N+A+KT+K LQ+A+GA+Y D+ +W +HD KI+ALE Sbjct: 261 AHYQAMEKELFLELGDSAIEALNAAAKTIKNLQIASGAIYSDDNHNWTAIHDAKIQALES 320 Query: 62 IIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGH 121 I+ ++ P++VAYH+ DL RL KAFP+G+ LD +P T+ WN GKIPLLFAHPASCGH Sbjct: 321 IVNESGGTPVLVAYHWKHDLERLLKAFPKGKMLDANPQTLTNWNSGKIPLLFAHPASCGH 380 Query: 122 GLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVL 181 GLNLQ GGNILVFFS WWDLE++QQ+IERIG TRQ QAG R VF+++++A++T+DE+V+ Sbjct: 381 GLNLQDGGNILVFFSHWWDLEQYQQIIERIGPTRQAQAGHNRPVFIHHIVAKDTLDEVVM 440 >gi|153814245|ref|ZP_01966913.1| hypothetical protein RUMTOR_00454 [Ruminococcus torques ATCC 27756] gi|145848641|gb|EDK25559.1| hypothetical protein RUMTOR_00454 [Ruminococcus torques ATCC 27756] Length = 457 Score = 258 bits (660), Expect = 3e-67, Method: Composition-based stats. Identities = 80/201 (39%), Positives = 124/201 (61%), Gaps = 9/201 (4%) Query: 3 QYHKFQRELYCDL-QGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEV 61 Y + E+ + +G++I+A N+A+ + K Q+ANGAVY DE + + +HD K+ ALE Sbjct: 251 LYDRMADEMILEYGEGQDIDAVNAAALSNKLQQMANGAVY-DESGNVRNIHDRKLDALED 309 Query: 62 IIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGH 121 ++E AN P++VAY F D R+ K FP R ++ I++WNEGKIP+ HPAS GH Sbjct: 310 LVESANGKPLLVAYWFKHDRERILKRFP-ARDIN-TKKDIEDWNEGKIPVALIHPASAGH 367 Query: 122 GLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVL 181 GLNLQ GG+ +V+FSL W LE +QQ+ R+ + G K V + +L+ + T+DE +L Sbjct: 368 GLNLQEGGSTIVWFSLTWSLELYQQLNARL-----YRQGQKHTVIIEHLVTEGTVDEDIL 422 Query: 182 QRLRTKSTIQDLLLNALKKET 202 + + K Q+ ++ A+K Sbjct: 423 RAIEKKDNTQNAMIEAVKARI 443 >gi|325687762|gb|EGD29783.1| SNF2 domain protein [Streptococcus sanguinis SK72] Length = 450 Score = 258 bits (660), Expect = 3e-67, Method: Composition-based stats. Identities = 87/201 (43%), Positives = 131/201 (65%), Gaps = 7/201 (3%) Query: 1 MKQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 + Y +F+ E+ L+G+ ++A NSAS + K LQ+ANG +Y DE + +HD+K+ ALE Sbjct: 249 LAVYKEFKAEMVVSLKGQVLDAVNSASLSNKLLQMANGMIY-DENRDTVLLHDQKLVALE 307 Query: 61 VIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCG 120 ++E N P++VAY F DL R+++ FP+ R + + I+EWN+GKIPL HPAS G Sbjct: 308 EMVESMNGRPLLVAYWFQHDLKRIKERFPEARVI-QSNQDIEEWNKGKIPLGLIHPASSG 366 Query: 121 HGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELV 180 HGLNLQ GG+ + +F L W LE +QQ+ R+ + G K V V+++I +NTIDE V Sbjct: 367 HGLNLQAGGHTICWFGLTWSLELYQQLNARLW-----RQGQKETVVVHHIITKNTIDEQV 421 Query: 181 LQRLRTKSTIQDLLLNALKKE 201 ++RL+ K Q L++A+K E Sbjct: 422 MKRLKEKDISQQSLIDAVKYE 442 >gi|220930418|ref|YP_002507327.1| SNF2-related protein [Clostridium cellulolyticum H10] gi|220000746|gb|ACL77347.1| SNF2-related protein [Clostridium cellulolyticum H10] Length = 457 Score = 258 bits (660), Expect = 3e-67, Method: Composition-based stats. Identities = 89/207 (42%), Positives = 128/207 (61%), Gaps = 9/207 (4%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEV 61 +Y K +R+L L +I A +A + K LQ ANGAVY +E + +++H+ K+ ALE Sbjct: 254 AKYRKLERDLLLPLVDGDIVANTAAVLSNKLLQFANGAVY-NENQEIQKIHNAKLDALED 312 Query: 62 IIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDP---CTIQEWNEGKIPLLFAHPAS 118 I+E AN P+++ Y + DL+R+Q+ F Q RTL K P I +WN GKI LL HP S Sbjct: 313 ILEAANGHPVLLFYSYKHDLSRIQERFTQTRTLRKGPEGSKDIADWNSGKIQLLAVHPGS 372 Query: 119 CGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDE 178 GHGLNLQ GG+I+V+F L W LE +QQ R+ + G K++V +++L+A TIDE Sbjct: 373 AGHGLNLQDGGSIIVWFGLTWSLELYQQANARL-----HRQGQKQSVIIHHLVADGTIDE 427 Query: 179 LVLQRLRTKSTIQDLLLNALKKETIHV 205 V++ L K+T QD L+ A+K V Sbjct: 428 DVMRALEDKATGQDALMEAVKARIERV 454 >gi|313895516|ref|ZP_07829072.1| SNF2 family N-terminal domain protein [Selenomonas sp. oral taxon 137 str. F0430] gi|312975642|gb|EFR41101.1| SNF2 family N-terminal domain protein [Selenomonas sp. oral taxon 137 str. F0430] Length = 454 Score = 258 bits (659), Expect = 4e-67, Method: Composition-based stats. Identities = 77/198 (38%), Positives = 116/198 (58%), Gaps = 8/198 (4%) Query: 3 QYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVI 62 Y + ++++ L G I+A ++A+ + K LQ+ANGAVY E +HD K+ ALE + Sbjct: 255 LYDRMKQDMVVALGGTEIDAVSAAALSGKLLQMANGAVYT-ENGKSVHLHDRKLDALEDL 313 Query: 63 IEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHG 122 +E AN P++VAY + DL R+++ P + I+ WN KI + HPAS GHG Sbjct: 314 VESANGKPVLVAYWYRHDLERIKERLPVQEI--RSSADIENWNAEKISVAVIHPASAGHG 371 Query: 123 LNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQ 182 LNLQ+GG+ L++F L W LE +QQ RI + G K V ++++I TIDE V+Q Sbjct: 372 LNLQFGGSTLIWFGLTWSLELYQQTNARI-----YRQGQKGTVVIHHIITVGTIDENVMQ 426 Query: 183 RLRTKSTIQDLLLNALKK 200 L K+ Q L++A+K Sbjct: 427 ALGRKNKTQTALIDAVKA 444 >gi|225871338|ref|YP_002747285.1| SNF2 family phage protein [Streptococcus equi subsp. equi 4047] gi|225700742|emb|CAW95382.1| SNF2 family phage protein [Streptococcus equi subsp. equi 4047] Length = 440 Score = 257 bits (658), Expect = 5e-67, Method: Composition-based stats. Identities = 85/201 (42%), Positives = 126/201 (62%), Gaps = 10/201 (4%) Query: 1 MKQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 MK Y + + +L + + + I A NSA K LQ+ANGA+Y D++K +HD+K+ ALE Sbjct: 247 MKAYKQLEADLVLEFKDKEISAANSAVLANKLLQMANGAIY-DDDKTTVAIHDDKLDALE 305 Query: 61 VIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCG 120 ++E++ PI+V Y + DL RL+K FPQ L ++ +WN GKIP+L HP S G Sbjct: 306 NVVEESQGQPILVFYQYQHDLERLKKRFPQAEEL----TSVDKWNSGKIPILLCHPQSAG 361 Query: 121 HGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELV 180 HGLNLQ GG+I+V+F L W LE +QQ R+ + G V V++++A+NT+DE V Sbjct: 362 HGLNLQKGGHIIVWFGLTWSLEYYQQANARLD-----RQGQTEPVIVHHIVAENTVDEKV 416 Query: 181 LQRLRTKSTIQDLLLNALKKE 201 L+ L+ K Q+ LL A+K + Sbjct: 417 LRILQGKEKNQNALLEAVKAQ 437 >gi|306826832|ref|ZP_07460132.1| SNF2 domain protein [Streptococcus pyogenes ATCC 10782] gi|304430850|gb|EFM33859.1| SNF2 domain protein [Streptococcus pyogenes ATCC 10782] Length = 440 Score = 257 bits (658), Expect = 5e-67, Method: Composition-based stats. Identities = 86/201 (42%), Positives = 126/201 (62%), Gaps = 10/201 (4%) Query: 1 MKQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 MK Y + + +L + + + I A NSA K LQ+ANGA+Y D++K +HD+K+ ALE Sbjct: 247 MKAYKQLEADLVLEFKNKEISAANSAVLANKLLQMANGAIY-DDDKATVAIHDDKLDALE 305 Query: 61 VIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCG 120 I+E++ PI+V Y + DL RL+K FPQ L ++ +WN GKIP+L HP S G Sbjct: 306 NIVEESQGQPILVFYQYQHDLERLKKRFPQAEEL----TSVDKWNSGKIPILLCHPQSAG 361 Query: 121 HGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELV 180 HGLNLQ GG+I+V+F L W LE +QQ R+ + G V V++++A+NT+DE V Sbjct: 362 HGLNLQKGGHIIVWFGLTWSLEYYQQANARLD-----RQGQTEPVIVHHIVAENTVDEKV 416 Query: 181 LQRLRTKSTIQDLLLNALKKE 201 L+ L+ K Q+ LL A+K + Sbjct: 417 LRILQGKEKNQNALLEAVKAQ 437 >gi|281416462|ref|YP_003347382.1| DNA helicase [Enterococcus phage phiFL4A] gi|270209638|gb|ACZ64177.1| DNA helicase [Enterococcus phage phiFL4A] gi|315160593|gb|EFU04610.1| protein, SNF2 family [Enterococcus faecalis TX0645] gi|315579439|gb|EFU91630.1| protein, SNF2 family [Enterococcus faecalis TX0630] Length = 459 Score = 257 bits (658), Expect = 5e-67, Method: Composition-based stats. Identities = 87/201 (43%), Positives = 127/201 (63%), Gaps = 6/201 (2%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEV 61 KQY + +RE +L+G ++ A N+A+ + K LQL+NGAVY DE +E+H EK+ ALE Sbjct: 256 KQYKELEREYVLELEGTDVVASNAATLSNKLLQLSNGAVY-DENGDGREIHQEKLNALER 314 Query: 62 IIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGH 121 +IE A ++V Y + DL R+Q F Q + L+ I++WNEGKIPLL AHP S GH Sbjct: 315 VIEDAQGQSVLVFYQYQHDLERIQARFKQAKALNVSDGDIEKWNEGKIPLLLAHPQSAGH 374 Query: 122 GLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVL 181 GLNLQ GG+I+V+F L W LE +QQ R+ + G + V +++L+ + TIDE V+ Sbjct: 375 GLNLQKGGHIIVWFGLTWSLEFYQQANARLD-----RQGQTQPVIIHHLVTKGTIDEQVI 429 Query: 182 QRLRTKSTIQDLLLNALKKET 202 + L+ K Q L+ A+K + Sbjct: 430 KALQAKEQGQSALMAAVKAKI 450 >gi|159146252|gb|ABW90589.1| DEAD box helicase [Bacteriophage APSE-2] gi|159146254|gb|ABW90590.1| DEAD box helicase [Bacteriophage APSE-2] gi|159146256|gb|ABW90591.1| DEAD box helicase [Bacteriophage APSE-2] Length = 295 Score = 257 bits (658), Expect = 5e-67, Method: Composition-based stats. Identities = 105/179 (58%), Positives = 143/179 (79%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEV 61 YH ++EL+ +L IEA N+A+KT+K LQ+A+GA+Y D+ ++W E+HD KI+ALE Sbjct: 117 AHYHAMEKELFLELGESAIEALNAAAKTIKILQIASGAIYSDDNRNWTEIHDAKIQALES 176 Query: 62 IIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGH 121 I+ ++ P++VAYH+ DL RL KAFP+G+ LD +P T+ +WN GKIPLLFAHPASCGH Sbjct: 177 IVNESGGTPVLVAYHWKHDLERLLKAFPKGKNLDANPRTLTDWNNGKIPLLFAHPASCGH 236 Query: 122 GLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELV 180 GLNLQ GGNILVFFS WWDLE++QQ+IERIG TRQ QAG R VF+++++A++T+DE+V Sbjct: 237 GLNLQDGGNILVFFSHWWDLEQYQQIIERIGPTRQAQAGHNRPVFIHHIVAKDTLDEVV 295 >gi|300764700|ref|ZP_07074691.1| phage-associated helicase [Listeria monocytogenes FSL N1-017] gi|300514586|gb|EFK41642.1| phage-associated helicase [Listeria monocytogenes FSL N1-017] Length = 451 Score = 257 bits (658), Expect = 5e-67, Method: Composition-based stats. Identities = 81/200 (40%), Positives = 120/200 (60%), Gaps = 8/200 (4%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEV 61 ++Y +F+ +L L+ I+A N+A + K LQ+ANGA+Y DE +HD+K+ ALE Sbjct: 255 QKYDEFKADLVLQLKEATIDAANTAVLSNKLLQMANGAIY-DEFNVSHHIHDQKLDALED 313 Query: 62 IIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGH 121 +IE N PI++AY F DL R+++ F + K I +WNEG IP+ HPAS GH Sbjct: 314 LIEGTNGKPILIAYWFQHDLERIKERFNVRQI--KTSQDIIDWNEGSIPIAVIHPASAGH 371 Query: 122 GLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVL 181 GLNLQ GG+ LV+F L W LE + Q R+ + G V ++++IA++TIDE V+ Sbjct: 372 GLNLQAGGSTLVWFGLTWSLELYLQTNARLW-----RQGQSDTVVIHHIIAKDTIDEDVM 426 Query: 182 QRLRTKSTIQDLLLNALKKE 201 L+ K Q L++A+K Sbjct: 427 LALKRKDKTQSCLIDAVKAR 446 >gi|139473885|ref|YP_001128601.1| SNF2 family phage protein [Streptococcus pyogenes str. Manfredo] gi|134272132|emb|CAM30377.1| SNF2 family phage protein [Streptococcus pyogenes str. Manfredo] Length = 440 Score = 257 bits (658), Expect = 6e-67, Method: Composition-based stats. Identities = 86/201 (42%), Positives = 126/201 (62%), Gaps = 10/201 (4%) Query: 1 MKQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 MK Y + + +L + + + I A NSA K LQ+ANGA+Y D++K +HD+K+ ALE Sbjct: 247 MKAYKQLEADLVLEFKNKEISAANSAVLANKLLQMANGAIY-DDDKATVAIHDDKLDALE 305 Query: 61 VIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCG 120 I+E++ PI+V Y + DL RL+K FPQ L ++ +WN GKIP+L HP S G Sbjct: 306 NIVEESQGQPILVFYQYQHDLERLKKRFPQAEEL----TSVDKWNSGKIPILLCHPQSAG 361 Query: 121 HGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELV 180 HGLNLQ GG+I+V+F L W LE +QQ R+ + G V V++++A+NT+DE V Sbjct: 362 HGLNLQKGGHIIVWFGLTWSLEYYQQANARLD-----RQGQTEPVIVHHIVAENTVDEKV 416 Query: 181 LQRLRTKSTIQDLLLNALKKE 201 L+ L+ K Q+ LL A+K + Sbjct: 417 LRILQGKEKNQNALLEAVKAQ 437 >gi|300933380|ref|ZP_07148636.1| phage-associated protein [Corynebacterium resistens DSM 45100] Length = 454 Score = 257 bits (657), Expect = 6e-67, Method: Composition-based stats. Identities = 90/200 (45%), Positives = 125/200 (62%), Gaps = 7/200 (3%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEV 61 K Y + + E+ DL G+ I+A N+A+ + K LQLA+GA+Y DEE + VHD K+ ALE Sbjct: 254 KAYERLRDEMVLDLDGQVIDAANAAALSGKLLQLASGAIY-DEEGNTVVVHDRKLDALED 312 Query: 62 IIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGH 121 ++E AN P++VAY F D R+ + PQ R L I+ WNEG IPL HPAS GH Sbjct: 313 LVEAANGQPLLVAYWFKHDRQRITERLPQAREL-TTSADIEAWNEGGIPLALIHPASAGH 371 Query: 122 GLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVL 181 GLNLQ GGN+LV+FSL W LE +QQ R+ + G + V + +L + +T+DE VL Sbjct: 372 GLNLQQGGNLLVWFSLTWSLELYQQTNARL-----YRQGQDQPVTITHLASADTLDEAVL 426 Query: 182 QRLRTKSTIQDLLLNALKKE 201 L +K+ IQ L++A+ E Sbjct: 427 AALESKNDIQSALIDAVTSE 446 >gi|304389862|ref|ZP_07371821.1| SNF2 domain protein [Mobiluncus curtisii subsp. curtisii ATCC 35241] gi|304327038|gb|EFL94277.1| SNF2 domain protein [Mobiluncus curtisii subsp. curtisii ATCC 35241] Length = 458 Score = 257 bits (657), Expect = 7e-67, Method: Composition-based stats. Identities = 85/201 (42%), Positives = 119/201 (59%), Gaps = 7/201 (3%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEV 61 K Y + + +L L E I+A N+A+ + K LQLA+GA+Y + W VHD K+ ALE Sbjct: 254 KVYEQLKADLVLQLGDETIDAANAAALSGKLLQLASGAIYTGDGD-WASVHDRKLDALED 312 Query: 62 IIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGH 121 ++E N P++VAY F D R+ FPQ R L K I+ WN+G+I HPAS GH Sbjct: 313 LVEATNGNPLLVAYWFTHDRERITARFPQAREL-KTSADIEAWNKGEITFGLIHPASAGH 371 Query: 122 GLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVL 181 GLNLQ GG++LV+FSL W LE +QQ R+ + G V + +L+A+ T+DE VL Sbjct: 372 GLNLQAGGHLLVWFSLTWSLELYQQTNARL-----YRQGQSEPVTITHLVAEGTLDEAVL 426 Query: 182 QRLRTKSTIQDLLLNALKKET 202 + L K Q L+NA+ +E Sbjct: 427 RALDVKDATQAALINAVAQEI 447 >gi|293401139|ref|ZP_06645283.1| SNF2 domain protein [Erysipelotrichaceae bacterium 5_2_54FAA] gi|291305265|gb|EFE46510.1| SNF2 domain protein [Erysipelotrichaceae bacterium 5_2_54FAA] Length = 447 Score = 257 bits (657), Expect = 7e-67, Method: Composition-based stats. Identities = 83/194 (42%), Positives = 112/194 (57%), Gaps = 7/194 (3%) Query: 7 FQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKA 66 + + +L I A N+AS T K QLANGA+Y D+E + E HD K+ ALE IIE A Sbjct: 259 LKADFILELPEGEITAANAASLTGKLSQLANGAIY-DDESNIVEFHDRKLDALEDIIESA 317 Query: 67 NAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQ 126 N P++VAY F DL R++K F K I +WN G IP+ HPAS GHGLNLQ Sbjct: 318 NGKPLLVAYWFKHDLQRIKKHFDVREI--KTSKDIIDWNNGDIPVAVIHPASAGHGLNLQ 375 Query: 127 YGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRT 186 GG+ L++F L W LE +QQ R+ RQ V + ++I + TIDE +L+ L Sbjct: 376 AGGSTLIWFGLTWSLELYQQTNARL----WRQGQSSGTVVIEHIITKGTIDERILKALSL 431 Query: 187 KSTIQDLLLNALKK 200 K Q+ L++A+K Sbjct: 432 KEVSQNALIDAVKA 445 >gi|28895337|ref|NP_801687.1| hypothetical protein SPs0425 [Streptococcus pyogenes SSI-1] gi|28810583|dbj|BAC63520.1| hypothetical protein (phage associated) [Streptococcus pyogenes SSI-1] Length = 442 Score = 257 bits (656), Expect = 9e-67, Method: Composition-based stats. Identities = 85/201 (42%), Positives = 126/201 (62%), Gaps = 10/201 (4%) Query: 1 MKQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 MK Y + + +L + + + I A NSA K LQ+ANGA+Y D++K +HD+K+ ALE Sbjct: 249 MKAYKQLEADLVLEFKNKEISAANSAVLANKLLQMANGAIY-DDDKATVAIHDDKLDALE 307 Query: 61 VIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCG 120 ++E++ PI+V Y + DL RL+K FPQ L ++ +WN GKIP+L HP S G Sbjct: 308 NVVEESQGQPILVFYQYQHDLERLKKRFPQAEEL----TSVDKWNSGKIPILLCHPQSAG 363 Query: 121 HGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELV 180 HGLNLQ GG+I+V+F L W LE +QQ R+ + G V V++++A+NT+DE V Sbjct: 364 HGLNLQKGGHIIVWFGLTWSLEYYQQANARLD-----RQGQTEPVIVHHIVAENTVDEKV 418 Query: 181 LQRLRTKSTIQDLLLNALKKE 201 L+ L+ K Q+ LL A+K + Sbjct: 419 LRILQGKEKNQNALLEAVKAQ 439 >gi|21910976|ref|NP_665244.1| putative helicase - phage associated [Streptococcus pyogenes MGAS315] gi|28876470|ref|NP_795678.1| putative helicase [Streptococcus pyogenes phage 315.6] gi|50913383|ref|YP_059355.1| Phage-related DNA helicase [Streptococcus pyogenes MGAS10394] gi|21905184|gb|AAM80047.1| putative helicase - phage-associated [Streptococcus pyogenes MGAS315] gi|50902457|gb|AAT86172.1| Phage-related DNA helicase [Streptococcus pyogenes MGAS10394] Length = 440 Score = 256 bits (655), Expect = 1e-66, Method: Composition-based stats. Identities = 85/201 (42%), Positives = 126/201 (62%), Gaps = 10/201 (4%) Query: 1 MKQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 MK Y + + +L + + + I A NSA K LQ+ANGA+Y D++K +HD+K+ ALE Sbjct: 247 MKAYKQLEADLVLEFKNKEISAANSAVLANKLLQMANGAIY-DDDKATVAIHDDKLDALE 305 Query: 61 VIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCG 120 ++E++ PI+V Y + DL RL+K FPQ L ++ +WN GKIP+L HP S G Sbjct: 306 NVVEESQGQPILVFYQYQHDLERLKKRFPQAEEL----TSVDKWNSGKIPILLCHPQSAG 361 Query: 121 HGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELV 180 HGLNLQ GG+I+V+F L W LE +QQ R+ + G V V++++A+NT+DE V Sbjct: 362 HGLNLQKGGHIIVWFGLTWSLEYYQQANARLD-----RQGQTEPVIVHHIVAENTVDEKV 416 Query: 181 LQRLRTKSTIQDLLLNALKKE 201 L+ L+ K Q+ LL A+K + Sbjct: 417 LRILQGKEKNQNALLEAVKAQ 437 >gi|257088837|ref|ZP_05583198.1| conserved hypothetical protein [Enterococcus faecalis CH188] gi|256997649|gb|EEU84169.1| conserved hypothetical protein [Enterococcus faecalis CH188] Length = 430 Score = 256 bits (655), Expect = 1e-66, Method: Composition-based stats. Identities = 87/201 (43%), Positives = 127/201 (63%), Gaps = 6/201 (2%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEV 61 KQY + +RE +L+G ++ A N+A+ + K LQL+NGAVY DE +E+H EK+ ALE Sbjct: 227 KQYKELEREYVLELEGTDVVASNAATLSNKLLQLSNGAVY-DENGDGREIHQEKLNALER 285 Query: 62 IIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGH 121 +IE A ++V Y + DL R+Q F Q + L+ I++WNEGKIPLL AHP S GH Sbjct: 286 VIEDAQGQSVLVFYQYQHDLERIQARFKQAKALNVSDGDIEKWNEGKIPLLLAHPQSAGH 345 Query: 122 GLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVL 181 GLNLQ GG+I+V+F L W LE +QQ R+ + G + V +++L+ + TIDE V+ Sbjct: 346 GLNLQKGGHIIVWFGLTWSLEFYQQANARLD-----RQGQTQPVIIHHLVTKGTIDEQVI 400 Query: 182 QRLRTKSTIQDLLLNALKKET 202 + L+ K Q L+ A+K + Sbjct: 401 KALQAKEQGQSALMAAVKAKI 421 >gi|209559301|ref|YP_002285773.1| Putative helicase-phage associated [Streptococcus phage NZ131.2] gi|209540502|gb|ACI61078.1| Putative helicase-phage associated [Streptococcus phage NZ131.2] Length = 440 Score = 256 bits (654), Expect = 1e-66, Method: Composition-based stats. Identities = 86/201 (42%), Positives = 126/201 (62%), Gaps = 10/201 (4%) Query: 1 MKQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 MK Y + + +L + + + I A NSA K LQ+ANGA+Y D++K +HD+K+ ALE Sbjct: 247 MKAYKQLEADLVLEFKNKEISAANSAVLANKLLQMANGAIY-DDDKATVAIHDDKLDALE 305 Query: 61 VIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCG 120 I+E++ PI+V Y + DL RL+K FPQ L ++ +WN GKIP+L HP S G Sbjct: 306 NIVEESQGQPILVFYQYQHDLERLKKRFPQAEEL----TSVDKWNSGKIPILLCHPQSAG 361 Query: 121 HGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELV 180 HGLNLQ GG+I+V+F L W LE +QQ R+ + G V V++++A+NT+DE V Sbjct: 362 HGLNLQKGGHIIVWFGLTWSLEYYQQANARLD-----RQGQTEPVIVHHIVAENTVDEKV 416 Query: 181 LQRLRTKSTIQDLLLNALKKE 201 L+ L+ K Q+ LL A+K + Sbjct: 417 LRILQGKEKNQNDLLEAVKAQ 437 >gi|159146264|gb|ABW90595.1| DEAD box helicase [Bacteriophage APSE-2] Length = 295 Score = 256 bits (654), Expect = 1e-66, Method: Composition-based stats. Identities = 104/179 (58%), Positives = 140/179 (78%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEV 61 YH ++EL+ +L IEA N+A+KT+K LQ+A+GA+Y D+ +W +HD KI+ALE Sbjct: 117 AHYHAMEKELFLELSDSAIEALNAAAKTIKNLQIASGAIYSDDNHNWTAIHDAKIQALES 176 Query: 62 IIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGH 121 I+ ++ P++VAYH+ DL RL KAFP+G+ LD +P T+ WN GKIPLLFAHPASCGH Sbjct: 177 IVNESGGTPVLVAYHWKHDLERLLKAFPKGKMLDANPQTLTNWNSGKIPLLFAHPASCGH 236 Query: 122 GLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELV 180 GLNLQ GGNILVFFS WWDLE++QQ+IERIG TRQ QAG R VF+++++A++T+DE+V Sbjct: 237 GLNLQDGGNILVFFSHWWDLEQYQQIIERIGPTRQAQAGHNRPVFIHHIVAKDTLDEVV 295 >gi|159146258|gb|ABW90592.1| DEAD box helicase [Bacteriophage APSE-2] Length = 295 Score = 256 bits (654), Expect = 1e-66, Method: Composition-based stats. Identities = 103/179 (57%), Positives = 140/179 (78%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEV 61 YH ++EL+ +L IEA N+A+KT+K LQ+A+GA+Y D+ +W +HD KI+ALE Sbjct: 117 AHYHAMEKELFLELGESAIEALNAAAKTIKILQIASGAIYSDDNHNWTAIHDAKIQALES 176 Query: 62 IIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGH 121 I+ ++ P++VAYH+ DL RL KAFP+G+ LD +P T+ WN GK+PLLFAHPASCGH Sbjct: 177 IVNESGGTPVLVAYHWKHDLERLLKAFPKGKMLDTNPQTLTNWNSGKVPLLFAHPASCGH 236 Query: 122 GLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELV 180 GLNLQ GGNILVFFS WWDLE++QQ+IERIG TRQ QAG R VF+++++A++T+DE+V Sbjct: 237 GLNLQDGGNILVFFSHWWDLEQYQQIIERIGPTRQAQAGHNRPVFIHHIVAKDTLDEVV 295 >gi|273810587|ref|YP_003344968.1| gp33 [Sodalis phage SO-1] gi|258619872|gb|ACV84125.1| gp33 [Sodalis phage SO-1] Length = 474 Score = 256 bits (654), Expect = 1e-66, Method: Composition-based stats. Identities = 103/208 (49%), Positives = 139/208 (66%), Gaps = 8/208 (3%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEK-----HWKEVHDEKI 56 K Y +F+ EL+ +L+ +EA N+ASKT+KCLQLA+GAVY +E W ++HD K+ Sbjct: 263 KIYDQFESELFAELESGTVEAANAASKTIKCLQLASGAVYKVDEDGERTDEWVKIHDAKL 322 Query: 57 KALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPC---TIQEWNEGKIPLLF 113 ALE I+E+ N AP++VAY + DLARL+K FP G L K ++ WN G+IP++F Sbjct: 323 DALESIVEELNGAPLLVAYQYKHDLARLKKKFPHGVALGKGKQGNKDMEAWNRGEIPIMF 382 Query: 114 AHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQ 173 AHPAS GHGLNLQ GG+ L FS W+ E Q++ERIG RQ QAG R VFVY + A+ Sbjct: 383 AHPASAGHGLNLQDGGHHLAIFSDTWNFEHFSQIVERIGPVRQMQAGHPRPVFVYIIQAR 442 Query: 174 NTIDELVLQRLRTKSTIQDLLLNALKKE 201 T+DELV +R +K IQD L+ +K + Sbjct: 443 GTLDELVAERRDSKRDIQDDLMEYMKAK 470 >gi|300856809|ref|YP_003781793.1| putative phage related DNA helicase [Clostridium ljungdahlii DSM 13528] gi|300436924|gb|ADK16691.1| predicted phage related DNA helicase [Clostridium ljungdahlii DSM 13528] Length = 443 Score = 256 bits (654), Expect = 2e-66, Method: Composition-based stats. Identities = 85/202 (42%), Positives = 124/202 (61%), Gaps = 9/202 (4%) Query: 3 QYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVI 62 +Y + +++L +L E+I A N+A T K LQ++NGA+Y ++ K ++HDEK+KAL I Sbjct: 239 KYKELEKDLVLELGKEDITAANAAVLTNKLLQMSNGAIYSED-KKVVKIHDEKLKALFEI 297 Query: 63 IEKANAAPIIVAYHFNSDLARLQKAFPQGRTLD---KDPCTIQEWNEGKIPLLFAHPASC 119 IE AN P++V Y F D R+ + KD I+ WN+G+IP+L HPAS Sbjct: 298 IEAANGKPVLVFYSFKHDFDRIINFLSSKKLKAVGLKDSADIKRWNKGEIPILLIHPASA 357 Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 GHGLNLQYGGNI+V+F L W LE +QQ R+ + G K V + ++IA+ T+DE Sbjct: 358 GHGLNLQYGGNIIVWFGLTWSLELYQQANARL-----HRQGQKETVVINHIIAKGTVDED 412 Query: 180 VLQRLRTKSTIQDLLLNALKKE 201 V++ L K Q++LL A+K Sbjct: 413 VMKSLGNKKVNQNILLEAVKAR 434 >gi|325478705|gb|EGC81816.1| type III restriction enzyme, res subunit [Anaerococcus prevotii ACS-065-V-Col13] Length = 448 Score = 256 bits (653), Expect = 2e-66, Method: Composition-based stats. Identities = 79/198 (39%), Positives = 126/198 (63%), Gaps = 8/198 (4%) Query: 3 QYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVI 62 Y +++L ++ ++I+A N+A+ + K LQ+A+G+VY DE+K+ +HD K+ ALE + Sbjct: 255 IYETLKKDLVVSIKDKDIDAVNAAALSNKLLQMASGSVY-DEDKNMIHIHDRKLDALEDL 313 Query: 63 IEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHG 122 IE AN P+++AY + SDL R++ F K +EWN+GKIP+ HPAS GHG Sbjct: 314 IEGANGKPVLIAYWYKSDLKRIKDRFDLREL--KTSEDFKEWNQGKIPVAIIHPASAGHG 371 Query: 123 LNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQ 182 LNLQ GG+ L++FSL W LE ++Q R+ + G K V +++++A+ TIDE V++ Sbjct: 372 LNLQAGGSTLIWFSLTWSLELYEQTNARL-----YRQGQKETVVIHHILAKGTIDEDVMK 426 Query: 183 RLRTKSTIQDLLLNALKK 200 L K+ Q L++A+K Sbjct: 427 ALENKNKTQAALIDAVKA 444 >gi|227520161|ref|ZP_03950210.1| helicase [Enterococcus faecalis TX0104] gi|227072406|gb|EEI10369.1| helicase [Enterococcus faecalis TX0104] gi|315574062|gb|EFU86253.1| protein, SNF2 family [Enterococcus faecalis TX0309B] gi|315582007|gb|EFU94198.1| protein, SNF2 family [Enterococcus faecalis TX0309A] Length = 455 Score = 256 bits (653), Expect = 2e-66, Method: Composition-based stats. Identities = 86/201 (42%), Positives = 126/201 (62%), Gaps = 6/201 (2%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEV 61 KQY + +RE +L+ ++ A N+A+ + K LQL+NGAVY DE +E+H EK+ ALE Sbjct: 256 KQYKELEREYVLELEETDVVASNAATLSNKLLQLSNGAVY-DENGDGREIHQEKLNALER 314 Query: 62 IIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGH 121 +IE A ++V Y + DL R+Q F Q + L+ I++WNEGKIPLL AHP S GH Sbjct: 315 VIEDAQGQSVLVFYQYQHDLERIQARFKQAKALNVSDGDIEKWNEGKIPLLLAHPQSAGH 374 Query: 122 GLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVL 181 GLNLQ GG+I+V+F L W LE +QQ R+ + G + V +++L+ + TIDE V+ Sbjct: 375 GLNLQKGGHIIVWFGLTWSLEFYQQANARLD-----RQGQTQPVIIHHLVTKGTIDEQVI 429 Query: 182 QRLRTKSTIQDLLLNALKKET 202 + L+ K Q L+ A+K + Sbjct: 430 KALQAKEQGQSALMAAVKAKI 450 >gi|159146260|gb|ABW90593.1| DEAD box helicase [Bacteriophage APSE-2] Length = 295 Score = 256 bits (653), Expect = 2e-66, Method: Composition-based stats. Identities = 104/178 (58%), Positives = 140/178 (78%) Query: 3 QYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVI 62 Y ++EL+ +L IEA N+A+KT+K LQ+A+GA+Y D+ ++W E+HD KI+ LE I Sbjct: 118 HYQAMEKELFLELGESAIEALNAAAKTIKILQIASGAIYSDDNRNWTEIHDAKIQVLESI 177 Query: 63 IEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHG 122 + +A P++VAYH+ DL RL KAFP+G+ LD +P T+ WN GKIPLLFAHPASCGHG Sbjct: 178 VNEAGGMPVLVAYHWKHDLERLLKAFPKGKMLDANPQTLTNWNSGKIPLLFAHPASCGHG 237 Query: 123 LNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELV 180 LNLQ GGNILVFFS WWDLE++QQ+IERIG TRQ QAG R VF+++++A++T+DE+V Sbjct: 238 LNLQDGGNILVFFSHWWDLEQYQQIIERIGPTRQAQAGHNRPVFIHHIVAKDTLDEVV 295 >gi|331090252|ref|ZP_08339139.1| hypothetical protein HMPREF1025_02722 [Lachnospiraceae bacterium 3_1_46FAA] gi|330401871|gb|EGG81446.1| hypothetical protein HMPREF1025_02722 [Lachnospiraceae bacterium 3_1_46FAA] Length = 453 Score = 255 bits (652), Expect = 3e-66, Method: Composition-based stats. Identities = 76/204 (37%), Positives = 121/204 (59%), Gaps = 8/204 (3%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEV 61 K Y + ++++ + +++A N+A+ + K LQ+ANGAVY DE + +HD+K+ ALE Sbjct: 250 KLYRQKEKDMLLPFEDGDVDAVNAAALSGKLLQMANGAVY-DENHKVRHIHDKKLDALED 308 Query: 62 IIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGH 121 +IE AN P++VAY + DL R+ + F K I++W EGKIP+ HPAS GH Sbjct: 309 LIEAANGKPVLVAYWYQHDLDRIVERFKAVPL--KAAGDIRKWKEGKIPVAAIHPASAGH 366 Query: 122 GLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVL 181 GLN+Q GG+IL++F L W LE + Q R+ + G + V +Y++I + T+DE + Sbjct: 367 GLNIQDGGHILIWFGLTWSLELYMQCNARLW-----RQGQRETVMIYHIINKGTLDEDAM 421 Query: 182 QRLRTKSTIQDLLLNALKKETIHV 205 + L K Q +++A+K V Sbjct: 422 RSLEQKDCGQSAIIDAVKARIGGV 445 >gi|153938777|ref|YP_001391667.1| SNF2 domain-containing protein [Clostridium botulinum F str. Langeland] gi|152934673|gb|ABS40171.1| SNF2 domain protein [Clostridium botulinum F str. Langeland] gi|295319699|gb|ADG00077.1| SNF2 domain protein [Clostridium botulinum F str. 230613] Length = 454 Score = 255 bits (652), Expect = 3e-66, Method: Composition-based stats. Identities = 84/205 (40%), Positives = 133/205 (64%), Gaps = 11/205 (5%) Query: 1 MKQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 M +Y + +++L +L ++I A N+A T K LQ++NGA+Y ++ K E+H+EK+KAL Sbjct: 252 MDKYKQLEKDLVIELGEDDITATNAAVLTNKLLQMSNGAIYSED-KSVLEIHEEKLKALL 310 Query: 61 VIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLD----KDPCTIQEWNEGKIPLLFAHP 116 IIE AN P+++ Y F D R+ F + + L+ +D I++WN G+IP+L HP Sbjct: 311 DIIEAANGKPVLIFYSFKHDFDRIVN-FLKTKKLNAIGLEDSKDIKKWNNGEIPILLVHP 369 Query: 117 ASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTI 176 AS GHGLNLQYGGNI+V+F L W LE +QQ R+ + G K +V +++L++++T+ Sbjct: 370 ASAGHGLNLQYGGNIIVWFGLTWSLELYQQANARL-----HRQGQKESVIIHHLVSKDTV 424 Query: 177 DELVLQRLRTKSTIQDLLLNALKKE 201 DE V++ L +K Q++LL A+K Sbjct: 425 DEDVIKALDSKEVNQNVLLEAVKAR 449 >gi|50843064|ref|YP_056291.1| phage-associated protein [Propionibacterium acnes KPA171202] gi|50840666|gb|AAT83333.1| conserved phage-associated protein [Propionibacterium acnes KPA171202] gi|315106939|gb|EFT78915.1| protein, SNF2 family [Propionibacterium acnes HL030PA1] Length = 458 Score = 255 bits (652), Expect = 3e-66, Method: Composition-based stats. Identities = 87/200 (43%), Positives = 119/200 (59%), Gaps = 7/200 (3%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEV 61 Y + + +L DL G+ ++A N+A+ + K LQLA+GA+Y DE EVH K+ ALE Sbjct: 254 AVYEQLKADLVVDLDGQVVDAANAAALSGKLLQLASGAIY-DEHGDTVEVHGAKLDALED 312 Query: 62 IIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGH 121 IIE AN ++VAY + D R+Q+ FPQ R L K I+ WN G IPL HPAS GH Sbjct: 313 IIEAANGQTVLVAYWYRHDRERIQRRFPQAREL-KTSADIEAWNRGDIPLGLIHPASAGH 371 Query: 122 GLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVL 181 GLNLQ GG++LV+FSL W LE +QQ R+ + G V + +L A T+D+ VL Sbjct: 372 GLNLQSGGHLLVWFSLTWSLELYQQTNARL-----YRQGQAEPVTITHLTATGTLDQAVL 426 Query: 182 QRLRTKSTIQDLLLNALKKE 201 + L K Q L++A+ E Sbjct: 427 KALEAKDMTQAALIDAVATE 446 >gi|29374969|ref|NP_814122.1| SNF2 domain-containing protein [Enterococcus faecalis V583] gi|29342427|gb|AAO80193.1| SNF2 domain protein [Enterococcus faecalis V583] Length = 457 Score = 255 bits (651), Expect = 3e-66, Method: Composition-based stats. Identities = 86/201 (42%), Positives = 126/201 (62%), Gaps = 6/201 (2%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEV 61 KQY + +RE +L+G ++ A N+A+ + K LQL+NGAVY DE +E+H EK+ ALE Sbjct: 254 KQYKELEREYVLELEGTDVVASNAATLSNKLLQLSNGAVY-DENGDGREIHQEKLNALER 312 Query: 62 IIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGH 121 +IE A ++V Y + DL R+Q F Q + L+ I++WNEGKI LL AHP S GH Sbjct: 313 VIEDAQGQSVLVFYQYQHDLERIQARFKQAKALNVSDGDIEKWNEGKISLLLAHPQSAGH 372 Query: 122 GLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVL 181 GLNLQ GG+I+V+F L W LE +QQ R+ + G + V +++L+ + TIDE V+ Sbjct: 373 GLNLQKGGHIIVWFGLTWSLEFYQQANARLD-----RQGQTQPVIIHHLVTKGTIDEQVI 427 Query: 182 QRLRTKSTIQDLLLNALKKET 202 + L+ K Q L+ A+K + Sbjct: 428 KALQAKEQGQSALMAAVKAKI 448 >gi|313813466|gb|EFS51180.1| protein, SNF2 family [Propionibacterium acnes HL025PA1] Length = 458 Score = 255 bits (651), Expect = 3e-66, Method: Composition-based stats. Identities = 87/200 (43%), Positives = 119/200 (59%), Gaps = 7/200 (3%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEV 61 Y + + +L DL G+ ++A N+A+ + K LQLA+GA+Y DE EVH K+ ALE Sbjct: 254 AVYEQLKADLVVDLDGQVVDAANAAALSGKLLQLASGAIY-DEHGDTVEVHGAKLDALED 312 Query: 62 IIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGH 121 IIE AN ++VAY + D R+Q+ FPQ R L K I+ WN G IPL HPAS GH Sbjct: 313 IIEAANGQTVLVAYWYRHDRERIQRRFPQAREL-KTSADIEAWNRGDIPLGLIHPASAGH 371 Query: 122 GLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVL 181 GLNLQ GG++LV+FSL W LE +QQ R+ + G V + +L A T+D+ VL Sbjct: 372 GLNLQSGGHLLVWFSLTWSLELYQQTNARL-----YRQGQAEPVTITHLTATGTLDQAVL 426 Query: 182 QRLRTKSTIQDLLLNALKKE 201 + L K Q L++A+ E Sbjct: 427 KALEAKDMTQAALIDAVATE 446 >gi|225220074|ref|YP_002720041.1| helicase [Enterobacteria phage SSL-2009a] gi|224986015|gb|ACN74579.1| helicase [Enterobacteria phage SSL-2009a] Length = 474 Score = 255 bits (651), Expect = 3e-66, Method: Composition-based stats. Identities = 102/208 (49%), Positives = 139/208 (66%), Gaps = 8/208 (3%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEK-----HWKEVHDEKI 56 K Y +F+ EL+ +L+ +EA N+ASKT+KCLQLA+GAVY +E W ++HD K+ Sbjct: 263 KIYDQFEAELFAELESGTVEAANAASKTIKCLQLASGAVYKVDEDGERTDEWVKIHDAKL 322 Query: 57 KALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPC---TIQEWNEGKIPLLF 113 ALE I+E+ N AP++VAY + DLARL+K FP G + K ++ WN G+IP++F Sbjct: 323 DALESIVEELNGAPLLVAYQYKHDLARLKKKFPHGVAMGKGKQGNKDMEAWNRGEIPIMF 382 Query: 114 AHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQ 173 AHPAS GHGLNLQ GG+ L FS W+ E Q++ERIG RQ QAG R VFVY + A+ Sbjct: 383 AHPASAGHGLNLQDGGHHLAIFSDTWNYEHFAQIVERIGPIRQMQAGHPRPVFVYIIQAR 442 Query: 174 NTIDELVLQRLRTKSTIQDLLLNALKKE 201 T+DELV +R +K IQD L+ +K + Sbjct: 443 GTLDELVAERRDSKRDIQDDLMEYMKAK 470 >gi|297587094|ref|ZP_06945739.1| SNF2 domain protein [Finegoldia magna ATCC 53516] gi|297575075|gb|EFH93794.1| SNF2 domain protein [Finegoldia magna ATCC 53516] Length = 447 Score = 254 bits (650), Expect = 4e-66, Method: Composition-based stats. Identities = 78/198 (39%), Positives = 126/198 (63%), Gaps = 8/198 (4%) Query: 3 QYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVI 62 Y +++L ++ ++I+A N+A+ + K LQ+A+G+VY DE+K+ +HD K+ ALE + Sbjct: 255 IYETLKKDLVVSIKDKDIDAVNAAALSNKLLQMASGSVY-DEDKNMIHIHDRKLDALEDL 313 Query: 63 IEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHG 122 IE AN P+++AY + SDL R++ F K ++EWN+G IP+ HPAS GHG Sbjct: 314 IEGANGKPVLIAYWYKSDLKRIKDRFDVREL--KASEDLKEWNQGNIPVAIIHPASAGHG 371 Query: 123 LNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQ 182 LNLQ GG+ L++FSL W LE ++Q R+ + G K V +++++A+ TIDE V++ Sbjct: 372 LNLQAGGSTLIWFSLTWSLELYEQTNARL-----YRQGQKETVVIHHILAKGTIDEDVMK 426 Query: 183 RLRTKSTIQDLLLNALKK 200 L K+ Q L++A+K Sbjct: 427 ALENKNKTQAALIDAVKA 444 >gi|260579063|ref|ZP_05846962.1| SNF2 domain protein [Corynebacterium jeikeium ATCC 43734] gi|258602814|gb|EEW16092.1| SNF2 domain protein [Corynebacterium jeikeium ATCC 43734] Length = 453 Score = 254 bits (650), Expect = 5e-66, Method: Composition-based stats. Identities = 89/197 (45%), Positives = 121/197 (61%), Gaps = 7/197 (3%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEV 61 K Y + + E+ DL G+ I+A N+A+ + K LQLA+GA+Y DE+ + VHD K+ ALE Sbjct: 254 KAYERLRDEMVLDLDGQVIDAANAAALSGKLLQLASGAIY-DEDGNTVVVHDRKLDALED 312 Query: 62 IIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGH 121 ++E AN P++VAY F DL R+ + FPQ R L I WN +IPL HPAS GH Sbjct: 313 LVEAANGQPLLVAYWFKHDLQRITERFPQAREL-TTSTDIAAWNAREIPLALIHPASAGH 371 Query: 122 GLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVL 181 GLNLQ GGN+LV+FSL W LE +QQ R+ + G + V + +L A +T+DE VL Sbjct: 372 GLNLQQGGNLLVWFSLTWSLELYQQTNARL-----YRQGQDQPVTITHLAADHTLDEAVL 426 Query: 182 QRLRTKSTIQDLLLNAL 198 L K Q L+NA+ Sbjct: 427 AALDNKDMTQAALINAV 443 >gi|226949727|ref|YP_002804818.1| SNF2 domain protein [Clostridium botulinum A2 str. Kyoto] gi|226843727|gb|ACO86393.1| SNF2 domain protein [Clostridium botulinum A2 str. Kyoto] Length = 456 Score = 254 bits (649), Expect = 5e-66, Method: Composition-based stats. Identities = 83/204 (40%), Positives = 129/204 (63%), Gaps = 9/204 (4%) Query: 1 MKQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 + +Y + +++L +L ++I A N+A T K LQ++NGA+Y ++ K E+HDEK+KAL Sbjct: 252 INKYKQLEKDLVLELGEDDITAANAAVLTNKLLQMSNGAIYSED-KQVIEIHDEKLKALL 310 Query: 61 VIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLD---KDPCTIQEWNEGKIPLLFAHPA 117 IIE AN P+++ Y F D R+ F + D I++WN G+IP+L HPA Sbjct: 311 DIIESANGKPVLIFYSFKHDFDRIVNFFKSKKLNAIGLGDSKDIKKWNNGEIPILLVHPA 370 Query: 118 SCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 S GHGLNLQYGGNI+V+F L W LE +QQ R+ + G K +V +++L++++T+D Sbjct: 371 SAGHGLNLQYGGNIIVWFGLTWSLELYQQANARL-----HRQGQKESVIIHHLVSKDTVD 425 Query: 178 ELVLQRLRTKSTIQDLLLNALKKE 201 E V++ L +K Q++LL A+K Sbjct: 426 EDVIKTLGSKEVNQNVLLEAVKAR 449 >gi|328913305|gb|AEB64901.1| SWI/SNF chromatin-remodeling complex subunit snf22 SWI/SNF complex subunit snf22; ATP-dependent helicase snf22 [Bacillus amyloliquefaciens LL3] Length = 424 Score = 254 bits (648), Expect = 7e-66, Method: Composition-based stats. Identities = 82/200 (41%), Positives = 124/200 (62%), Gaps = 7/200 (3%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEV 61 +Y + +++L ++ A +A + K LQLANGAVY DE +++HDEK+ ALE Sbjct: 227 AKYKQLEKDLLLPFLDGDVVADTAAVLSNKLLQLANGAVY-DENGEIQKLHDEKLNALED 285 Query: 62 IIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGH 121 I++ AN PI+V Y + DL R+Q+ F + +TLD I +WN GKI +L AHPAS GH Sbjct: 286 IVDAANGKPILVFYSYKHDLERIQQKFKKAKTLDSSRE-IADWNNGKIEMLLAHPASTGH 344 Query: 122 GLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVL 181 GLNLQ GG+++V+F + W LE +QQ R+ + G K +V V +L+ + T+DE V+ Sbjct: 345 GLNLQDGGHVIVWFGMTWSLELYQQANARLD-----RQGQKHSVIVNHLVTEGTVDEDVM 399 Query: 182 QRLRTKSTIQDLLLNALKKE 201 + L K+ Q+ L+ A+K Sbjct: 400 RALEGKAVGQNALMEAVKAR 419 >gi|159146262|gb|ABW90594.1| DEAD box helicase [Bacteriophage APSE-2] Length = 295 Score = 254 bits (648), Expect = 7e-66, Method: Composition-based stats. Identities = 103/179 (57%), Positives = 139/179 (77%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEV 61 Y ++EL+ +L IEA N+A+KT+K LQ+A+GA+Y D+ +W +HD KI+ALE Sbjct: 117 AHYQAMEKELFLELGDSAIEALNAAAKTIKNLQIASGAIYSDDNHNWTAIHDAKIQALES 176 Query: 62 IIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGH 121 I+ ++ P++VAYH+ DL RL KAFP+G+ LD +P T+ WN GKIPLLFAHPASCGH Sbjct: 177 IVNESGGTPVLVAYHWKHDLERLLKAFPKGKMLDANPQTLTNWNSGKIPLLFAHPASCGH 236 Query: 122 GLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELV 180 GLNLQ GGNILVFFS WWDLE++QQ+IERIG TRQ QAG R VF+++++A++T+DE+V Sbjct: 237 GLNLQDGGNILVFFSHWWDLEQYQQIIERIGPTRQAQAGHNRPVFIHHIVAKDTLDEVV 295 >gi|304436366|ref|ZP_07396342.1| SNF2 domain protein [Selenomonas sp. oral taxon 149 str. 67H29BP] gi|304370635|gb|EFM24284.1| SNF2 domain protein [Selenomonas sp. oral taxon 149 str. 67H29BP] Length = 447 Score = 254 bits (648), Expect = 7e-66, Method: Composition-based stats. Identities = 78/201 (38%), Positives = 109/201 (54%), Gaps = 7/201 (3%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEV 61 K Y +L ++G+ + A N+ + K Q+ANG VY D+ +HD K+ ALE Sbjct: 252 KMYDSMCEQLVLQMKGDEVTAANAGVLSGKLAQMANGTVYTDDGSTL-HIHDRKLDALED 310 Query: 62 IIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGH 121 IIE N P++V Y F D R++K P R I WN G+I + HPAS GH Sbjct: 311 IIESMNGKPLLVPYWFRHDAERIEKRLPCVRL--DTDDAIARWNRGEISVALIHPASAGH 368 Query: 122 GLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVL 181 GLNLQ GG+ LV+F + W LE +QQ + R+ RQ V V ++IA+ TIDE +L Sbjct: 369 GLNLQSGGSTLVWFGITWSLELYQQTVARL----YRQGQNSNTVVVQHIIAEGTIDERIL 424 Query: 182 QRLRTKSTIQDLLLNALKKET 202 + L+ K Q L+ A+K E Sbjct: 425 RALKRKDKTQTALIEAVKAEV 445 >gi|116630100|ref|YP_815272.1| SNF2 family DNA/RNA helicase [Lactobacillus gasseri ATCC 33323] gi|116095682|gb|ABJ60834.1| Superfamily II DNA/RNA helicase, SNF2 family [Lactobacillus gasseri ATCC 33323] Length = 450 Score = 254 bits (648), Expect = 7e-66, Method: Composition-based stats. Identities = 81/198 (40%), Positives = 122/198 (61%), Gaps = 8/198 (4%) Query: 3 QYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVI 62 Y + +L QG+ I+A N+AS + K Q+ANG VY D+++ ++H K+ ALE + Sbjct: 253 IYDELNAQLVVSTQGKQIDALNAASLSNKLCQMANGCVY-DDQQQVVQIHQRKLDALEDL 311 Query: 63 IEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHG 122 +E AN P+++AY F DLA++++ F Q R + K I +WN GKIPL HPAS GHG Sbjct: 312 VEAANGKPVLIAYWFKHDLAQIKQRF-QVREI-KTTQDINDWNAGKIPLALIHPASAGHG 369 Query: 123 LNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQ 182 LNLQ GG+ L+++ L W LE +QQ R+ + G ++ V +Y+LI + TIDE ++ Sbjct: 370 LNLQAGGSTLIWYGLTWSLELYQQTNARLW-----RQGQQQPVVIYHLITEGTIDENIMT 424 Query: 183 RLRTKSTIQDLLLNALKK 200 L+ K Q L+NA+K Sbjct: 425 ALKQKDKTQLALINAVKA 442 >gi|318064550|gb|ADV36504.1| helicase [Edwardsiella phage eiMSLS] Length = 449 Score = 253 bits (647), Expect = 9e-66, Method: Composition-based stats. Identities = 96/208 (46%), Positives = 136/208 (65%), Gaps = 8/208 (3%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVY--YDEE---KHWKEVHDEKI 56 K Y + L+ +L+ IEA N+A+KT KCLQ+A GA Y D+ K W E+H K+ Sbjct: 238 KIYDDMENALFAELESGEIEASNAAAKTAKCLQIAGGACYITTDDGEASKEWTEIHKAKL 297 Query: 57 KALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD---PCTIQEWNEGKIPLLF 113 ALE IIE+ N +P++VAY + DL RL K FPQGR + K + +WN GK+P++F Sbjct: 298 DALESIIEELNGSPLLVAYQYKHDLVRLLKRFPQGRAMRKGLKGNNDMADWNAGKVPIMF 357 Query: 114 AHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQ 173 HPAS GHGLNLQ GG L FF+ W+ E++ Q++ERIG RQ QAG R V++Y + A+ Sbjct: 358 VHPASAGHGLNLQDGGCHLAFFNDTWNYEQYAQIVERIGPVRQHQAGHPRTVYIYIIQAR 417 Query: 174 NTIDELVLQRLRTKSTIQDLLLNALKKE 201 T+DE+V R K+ +QDLL++ +K++ Sbjct: 418 GTLDEVVALRRDDKAEVQDLLMDYMKRK 445 >gi|167746056|ref|ZP_02418183.1| hypothetical protein ANACAC_00751 [Anaerostipes caccae DSM 14662] gi|167654571|gb|EDR98700.1| hypothetical protein ANACAC_00751 [Anaerostipes caccae DSM 14662] Length = 452 Score = 253 bits (647), Expect = 1e-65, Method: Composition-based stats. Identities = 80/203 (39%), Positives = 120/203 (59%), Gaps = 8/203 (3%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEV 61 K+Y + EL L I A N+AS + K Q+ANGAVY D+E VH+ K+ ALE Sbjct: 254 KKYEDMKAELVLALPEGEITAANAASLSNKLSQMANGAVYADDE-SILSVHERKLDALED 312 Query: 62 IIEKANAAPIIVAYHFNSDLARLQKAFPQGRT---LDKDPCTIQEWNEGKIPLLFAHPAS 118 IIE AN P++VAY F DL R+++ + + +++ WN+G++P+ HPAS Sbjct: 313 IIESANGKPLLVAYWFKHDLMRIEQRLNEKKIPFQKLDTDASMKRWNKGELPVALIHPAS 372 Query: 119 CGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDE 178 GHGLNLQ GG+ LV+F + W LE +QQ + R+ RQ R V + +++ Q T+DE Sbjct: 373 AGHGLNLQSGGSTLVWFGITWSLELYQQTVARL----YRQGQESRTVTIIHILTQGTVDE 428 Query: 179 LVLQRLRTKSTIQDLLLNALKKE 201 +++ L K + Q L++A+K E Sbjct: 429 KIMKALADKDSTQSALIDAVKAE 451 >gi|300909415|ref|ZP_07126876.1| SNF2 domain protein [Lactobacillus reuteri SD2112] gi|300893280|gb|EFK86639.1| SNF2 domain protein [Lactobacillus reuteri SD2112] Length = 451 Score = 253 bits (646), Expect = 1e-65, Method: Composition-based stats. Identities = 80/199 (40%), Positives = 118/199 (59%), Gaps = 8/199 (4%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEV 61 Y + +L QG+ I+A N+AS + K Q+ANG VY D+++ ++H K+ ALE Sbjct: 253 AIYDELNAQLVVSTQGKQIDALNAASLSNKLCQMANGCVY-DDQQQIVQIHQRKLDALED 311 Query: 62 IIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGH 121 ++E AN P++VAY F DL +++ F K P IQ+WN GKIPL HPAS GH Sbjct: 312 LVEAANGKPVLVAYWFKHDLIQIKSRFKVREI--KTPRDIQDWNAGKIPLALIHPASAGH 369 Query: 122 GLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVL 181 GLNLQ GG L+++ L W LE +QQ R+ + G ++ V ++++I + TIDE +L Sbjct: 370 GLNLQAGGATLIWYGLTWSLELYQQTNARLW-----RQGQRQPVVIHHIITEGTIDENIL 424 Query: 182 QRLRTKSTIQDLLLNALKK 200 L+ K Q L+NA+K Sbjct: 425 AALKRKDKTQLALINAVKA 443 >gi|227530256|ref|ZP_03960305.1| helicase [Lactobacillus vaginalis ATCC 49540] gi|227349829|gb|EEJ40120.1| helicase [Lactobacillus vaginalis ATCC 49540] Length = 451 Score = 253 bits (646), Expect = 1e-65, Method: Composition-based stats. Identities = 80/199 (40%), Positives = 118/199 (59%), Gaps = 8/199 (4%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEV 61 Y + +L QG+ I+A N+AS + K Q+ANG VY D+++ ++H K+ ALE Sbjct: 253 AIYDELNAQLVVSTQGKQIDALNAASLSNKLCQMANGCVY-DDQQQIVQIHQRKLDALED 311 Query: 62 IIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGH 121 ++E AN P++VAY F DL +++ F K P IQ+WN GKIPL HPAS GH Sbjct: 312 LVEAANGKPVLVAYWFKHDLIQIKSRFKVREI--KTPRDIQDWNAGKIPLALIHPASAGH 369 Query: 122 GLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVL 181 GLNLQ GG L+++ L W LE +QQ R+ + G ++ V ++++I + TIDE +L Sbjct: 370 GLNLQAGGATLIWYGLTWSLELYQQTNARLW-----RQGQRQPVVIHHIITEGTIDENIL 424 Query: 182 QRLRTKSTIQDLLLNALKK 200 L+ K Q L+NA+K Sbjct: 425 AALKRKDKTQLALINAVKA 443 >gi|318064334|gb|ADV36398.1| helicase [Edwardsiella phage eiAU] Length = 449 Score = 253 bits (646), Expect = 1e-65, Method: Composition-based stats. Identities = 96/208 (46%), Positives = 136/208 (65%), Gaps = 8/208 (3%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVY--YDEE---KHWKEVHDEKI 56 K Y + L+ +L+ IEA N+A+KT KCLQ+A GA Y D+ K W E+H K+ Sbjct: 238 KIYDDMENALFAELESGEIEASNAAAKTAKCLQIAGGACYITTDDGEASKEWTEIHKAKL 297 Query: 57 KALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD---PCTIQEWNEGKIPLLF 113 ALE IIE+ N +P++VAY + DL RL K FPQGR + K + +WN GK+P++F Sbjct: 298 DALESIIEELNGSPLLVAYQYKHDLVRLLKRFPQGRAMRKGLKGNNDMADWNAGKVPIMF 357 Query: 114 AHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQ 173 HPAS GHGLNLQ GG L FF+ W+ E++ Q++ERIG RQ QAG R V++Y + A+ Sbjct: 358 VHPASAGHGLNLQDGGCHLAFFNDTWNYEQYAQIVERIGPVRQHQAGHPRTVYIYIIQAR 417 Query: 174 NTIDELVLQRLRTKSTIQDLLLNALKKE 201 T+DE+V R K+ +QDLL++ +K++ Sbjct: 418 GTLDEVVALRRDDKAEVQDLLMDYMKRK 445 >gi|77412062|ref|ZP_00788388.1| SNF2 domain protein [Streptococcus agalactiae CJB111] gi|77161867|gb|EAO72852.1| SNF2 domain protein [Streptococcus agalactiae CJB111] Length = 458 Score = 252 bits (645), Expect = 2e-65, Method: Composition-based stats. Identities = 82/203 (40%), Positives = 122/203 (60%), Gaps = 9/203 (4%) Query: 4 YHKFQRELYC-DLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVI 62 Y +F+++ DL+ + A N+AS + K LQ+ANGAVY ++ +HD+K+ ALE I Sbjct: 256 YKQFKKDYVLADLENGEVTAANAASLSNKLLQMANGAVYSNDH-QVVSLHDQKLDALEDI 314 Query: 63 IEKANAAPIIVAYHFNSDLARLQKAFPQGR---TLDKDPCTIQEWNEGKIPLLFAHPASC 119 IE AN P++VAY F D+ R+++ + + T+ K I+EWN+GKI + HPAS Sbjct: 315 IEAANGEPVLVAYWFKHDVQRIEERLVKLKVKGTILKTEEDIREWNKGKISVGLLHPASA 374 Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 GHGLNLQ GG+ LV+F L W LE +QQ R+ RQ V + +++ Q TIDE Sbjct: 375 GHGLNLQKGGHHLVWFGLIWSLELYQQTNARL----WRQGQQADTVVIQHIVTQGTIDEE 430 Query: 180 VLQRLRTKSTIQDLLLNALKKET 202 +L+ L +K Q L+ A+K + Sbjct: 431 ILKALESKDAQQSRLIEAVKAQV 453 >gi|57233543|ref|YP_180823.1| SNF2 family helicase [Dehalococcoides ethenogenes 195] gi|57223991|gb|AAW39048.1| SNF2 family helicase, putative [Dehalococcoides ethenogenes 195] Length = 513 Score = 252 bits (645), Expect = 2e-65, Method: Composition-based stats. Identities = 80/203 (39%), Positives = 121/203 (59%), Gaps = 8/203 (3%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEV 61 ++Y + +++L L +I A N+A+ T K QLANGA+Y D+ + +HD K+ ALE Sbjct: 313 QRYDELKQDLVLQLPDGDITAANAAALTGKLCQLANGAIYTDDGDTFT-IHDRKLDALEN 371 Query: 62 IIEKANAAPIIVAYHFNSDLARLQKAFPQGRT---LDKDPCTIQEWNEGKIPLLFAHPAS 118 IIE A+ PI+VAY F DLAR+ + + +I++WN G++P+ HPAS Sbjct: 372 IIEAASGKPILVAYWFKHDLARITERLQKLHIPFSKLDSADSIRKWNAGELPVALIHPAS 431 Query: 119 CGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDE 178 GHGLNLQ GG+ +V+F L W LE +QQ R+ RQ V V +++A++TIDE Sbjct: 432 AGHGLNLQSGGSCIVWFGLTWSLELYQQTNARL----WRQGQNAETVVVQHIVAKDTIDE 487 Query: 179 LVLQRLRTKSTIQDLLLNALKKE 201 +L+ L K + Q L+ A+K + Sbjct: 488 RILKVLSKKDSTQAALIAAVKAD 510 >gi|302876787|ref|YP_003845420.1| SNF2-related protein [Clostridium cellulovorans 743B] gi|307687468|ref|ZP_07629914.1| SNF2-related protein [Clostridium cellulovorans 743B] gi|302579644|gb|ADL53656.1| SNF2-related protein [Clostridium cellulovorans 743B] Length = 456 Score = 252 bits (644), Expect = 2e-65, Method: Composition-based stats. Identities = 84/205 (40%), Positives = 125/205 (60%), Gaps = 10/205 (4%) Query: 1 MKQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 + Y + +++L L G I A N+AS + K Q+ANGAVY D+ K + E HD+K+ ALE Sbjct: 255 LDTYEEMKKDLVLSLPGGEITASNAASLSGKLSQMANGAVYTDD-KSYIEFHDKKLDALE 313 Query: 61 VIIEKANAAPIIVAYHFNSDLARLQKAFP----QGRTLDKDPCTIQEWNEGKIPLLFAHP 116 IIE AN P++VAY + DL R+++ Q + LD D +I++WN G++P+ HP Sbjct: 314 DIIEAANGQPLMVAYWYKHDLIRIEERLKSLGVQYQRLDSD-ASIEKWNRGELPVALVHP 372 Query: 117 ASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTI 176 AS GHGLNLQ GG+ LV+F + W LE +QQ R+ RQ V + +LI++ TI Sbjct: 373 ASAGHGLNLQSGGSTLVWFGITWSLELYQQTNARL----YRQGQTASCVKIIHLISKGTI 428 Query: 177 DELVLQRLRTKSTIQDLLLNALKKE 201 DE +++ L K Q L++A+K + Sbjct: 429 DERIVKALSDKDNTQAALIDAVKAD 453 >gi|318064442|gb|ADV36452.1| helicase [Edwardsiella phage eiDWF] Length = 449 Score = 252 bits (644), Expect = 2e-65, Method: Composition-based stats. Identities = 96/208 (46%), Positives = 136/208 (65%), Gaps = 8/208 (3%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVY--YDEE---KHWKEVHDEKI 56 K Y + L+ +L+ IEA N+A+KT KCLQ+A GA Y D+ K W E+H K+ Sbjct: 238 KIYDDMENALFAELESGEIEASNAAAKTAKCLQIAGGACYITTDDGEASKEWTEIHKAKL 297 Query: 57 KALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD---PCTIQEWNEGKIPLLF 113 ALE IIE+ N +P++VAY + DL RL K FPQGR + K + +WN GK+P++F Sbjct: 298 DALESIIEELNGSPLLVAYQYKHDLVRLLKRFPQGRAMRKGLKGNNDMADWNAGKVPIMF 357 Query: 114 AHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQ 173 HPAS GHGLNLQ GG L FF+ W+ E++ Q++ERIG RQ QAG R V++Y + A+ Sbjct: 358 XHPASAGHGLNLQDGGCHLAFFNDTWNYEQYAQIVERIGPVRQHQAGHPRTVYIYIIQAR 417 Query: 174 NTIDELVLQRLRTKSTIQDLLLNALKKE 201 T+DE+V R K+ +QDLL++ +K++ Sbjct: 418 GTLDEVVALRRDDKAEVQDLLMDYMKRK 445 >gi|308174984|ref|YP_003921689.1| SWI/SNF chromatin-remodeling complex subunit snf22 [Bacillus amyloliquefaciens DSM 7] gi|307607848|emb|CBI44219.1| SWI/SNF chromatin-remodeling complex subunit snf22 SWI/SNF complex subunit snf22; ATP-dependent helicase snf22 [Bacillus amyloliquefaciens DSM 7] Length = 451 Score = 252 bits (644), Expect = 2e-65, Method: Composition-based stats. Identities = 81/200 (40%), Positives = 123/200 (61%), Gaps = 7/200 (3%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEV 61 +Y + +++L ++ A +A + K LQLANGAVY DE +++HDEK+ ALE Sbjct: 254 AKYKQLEKDLLLPFLDGDVVADTAAVLSNKLLQLANGAVY-DENGEIQKLHDEKLNALED 312 Query: 62 IIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGH 121 I++ AN PI+V Y + DL R+Q+ F + + LD I +WN GKI +L AHPAS GH Sbjct: 313 IVDAANGKPILVFYSYKHDLERIQQKFKKAKPLDSSRE-IADWNNGKIEMLLAHPASTGH 371 Query: 122 GLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVL 181 GLNLQ GG+++V+F + W LE +QQ R+ + G K +V V +L+ + T+DE V+ Sbjct: 372 GLNLQDGGHVIVWFGMTWSLELYQQANARLD-----RQGQKHSVIVNHLVTEGTVDEDVM 426 Query: 182 QRLRTKSTIQDLLLNALKKE 201 + L K+ Q+ L+ A+K Sbjct: 427 RALEGKAVGQNALMEAVKAR 446 >gi|320530608|ref|ZP_08031660.1| protein, SNF2 family [Selenomonas artemidis F0399] gi|320137135|gb|EFW29065.1| protein, SNF2 family [Selenomonas artemidis F0399] Length = 429 Score = 252 bits (644), Expect = 2e-65, Method: Composition-based stats. Identities = 81/201 (40%), Positives = 123/201 (61%), Gaps = 7/201 (3%) Query: 1 MKQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 M++Y + +REL + +I A +A+ T K LQ+ANG+VY DE+ +H+ K AL+ Sbjct: 226 MRKYAEMERELVLSIGASDITAVTAAALTGKLLQMANGSVY-DEDGEAVTIHEAKADALD 284 Query: 61 VIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCG 120 II ++ Y + D A L + P+ R L K P I++WN GKI LL HPAS G Sbjct: 285 EIIACNEGKSVMAIYSYRHDRATLLRRHPEAREL-KTPEDIRDWNAGKISLLLVHPASAG 343 Query: 121 HGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELV 180 HGLNLQ+GG+I+V++ L W LE++QQ +R+ + G V +++LIA++T+DE V Sbjct: 344 HGLNLQHGGHIVVWYGLTWSLEQYQQTNKRL-----HRPGQTEPVILHHLIAKDTVDEDV 398 Query: 181 LQRLRTKSTIQDLLLNALKKE 201 ++ L KST Q+ +L A+K Sbjct: 399 MRALERKSTGQEGMLQAVKAR 419 >gi|238854134|ref|ZP_04644481.1| superfamily II DNA/RNA helicase, SNF2 family [Lactobacillus gasseri 202-4] gi|238833210|gb|EEQ25500.1| superfamily II DNA/RNA helicase, SNF2 family [Lactobacillus gasseri 202-4] Length = 450 Score = 252 bits (643), Expect = 3e-65, Method: Composition-based stats. Identities = 80/198 (40%), Positives = 122/198 (61%), Gaps = 8/198 (4%) Query: 3 QYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVI 62 Y + +L QG+ I+A N+AS + K Q+ANG VY D+++ ++H K+ A+E + Sbjct: 253 IYDELNAQLVVSTQGKQIDALNAASLSNKLCQMANGCVY-DDQQQVVQIHQRKLDAIEDL 311 Query: 63 IEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHG 122 +E AN P+++AY F DLA++++ F Q R + K I +WN GKIPL HPAS GHG Sbjct: 312 VEAANGKPVLIAYWFKHDLAQIKQRF-QVREI-KTTQDINDWNAGKIPLALIHPASAGHG 369 Query: 123 LNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQ 182 LNLQ GG+ L+++ L W LE +QQ R+ + G ++ V +Y+LI + TIDE ++ Sbjct: 370 LNLQAGGSTLIWYGLTWSLELYQQTNARLW-----RQGQQQPVVIYHLITEGTIDENIMT 424 Query: 183 RLRTKSTIQDLLLNALKK 200 L+ K Q L+NA+K Sbjct: 425 ALKQKDKTQLALINAVKA 442 >gi|134288567|ref|YP_001110806.1| putative helicase [Salmonella phage SETP3] gi|125631932|gb|ABN47335.1| putative helicase [Salmonella phage SETP3] Length = 821 Score = 251 bits (641), Expect = 5e-65, Method: Composition-based stats. Identities = 91/209 (43%), Positives = 138/209 (66%), Gaps = 8/209 (3%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYY-----DEEKHWKEVHDEKI 56 + Y + +L+ +L+ +EA N+A+KT KCLQ+A+GAVY + K W++VHD K+ Sbjct: 611 QAYIDMEEKLFAELESGEVEAANAAAKTSKCLQIASGAVYVSGPDGEATKDWEKVHDTKL 670 Query: 57 KALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPC---TIQEWNEGKIPLLF 113 ALE I+E+ AP++VAY F +L R+ + FPQ + K ++ WN G+I +L Sbjct: 671 DALESIVEELQGAPLLVAYQFKHELERILRRFPQAQAFAKGAKGNKQMESWNRGEIEILC 730 Query: 114 AHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQ 173 HPAS GHGLNLQ GG+ L F S W+LE + Q++ERIG RQ+QAG +R VF+Y+++A+ Sbjct: 731 VHPASAGHGLNLQDGGHHLAFISQGWNLEHYLQVVERIGPVRQKQAGHERPVFLYHIVAK 790 Query: 174 NTIDELVLQRLRTKSTIQDLLLNALKKET 202 +T+DE+V R K ++Q+ LLN +K+ Sbjct: 791 DTLDEVVAARTDEKKSVQEELLNYMKRRG 819 >gi|297585287|ref|YP_003701067.1| SNF2-like protein [Bacillus selenitireducens MLS10] gi|297143744|gb|ADI00502.1| SNF2-related protein [Bacillus selenitireducens MLS10] Length = 460 Score = 251 bits (640), Expect = 5e-65, Method: Composition-based stats. Identities = 81/202 (40%), Positives = 124/202 (61%), Gaps = 9/202 (4%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEV 61 + Y + ++E + ++ A ++A K LQLANGA+Y DE +EVHDEK++AL+ Sbjct: 254 RAYTQLEKEWLLAFEDADVLAGSAAVVANKLLQLANGAIY-DETGDVQEVHDEKLEALKE 312 Query: 62 IIEKANAAPIIVAYHFNSDLARLQKAFP--QGRTLDKDPCTIQEWNEGKIPLLFAHPASC 119 +IE AN P++V Y++ D R+ K + R L D I++WN+G +P+L AHPAS Sbjct: 313 LIESANGKPVLVYYNYQHDRDRILKHLKAFKPRVLKTD-QDIRDWNKGNVPVLLAHPASA 371 Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 GHGLNLQ GG+++V+F L W LE +QQ R+ + G V V++LI + T+DE Sbjct: 372 GHGLNLQAGGHVMVWFGLNWSLELYQQANARL-----HRQGQTETVVVHHLITKGTMDER 426 Query: 180 VLQRLRTKSTIQDLLLNALKKE 201 V+ L+ K T Q+ L+ A+K + Sbjct: 427 VMAALKQKDTSQEALIAAVKAK 448 >gi|304439204|ref|ZP_07399122.1| SNF2 domain protein [Peptoniphilus duerdenii ATCC BAA-1640] gi|304372336|gb|EFM25924.1| SNF2 domain protein [Peptoniphilus duerdenii ATCC BAA-1640] Length = 448 Score = 251 bits (640), Expect = 6e-65, Method: Composition-based stats. Identities = 77/198 (38%), Positives = 124/198 (62%), Gaps = 8/198 (4%) Query: 3 QYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVI 62 Y +++L +++ ++I+A N+A+ + K LQ+A+G+VY DE K+ +H+ K+ ALE + Sbjct: 255 IYETLKKDLVVNIKDKDIDAVNAAALSNKLLQMASGSVY-DEYKNMIHIHNRKLDALEDL 313 Query: 63 IEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHG 122 IE AN P+++AY + SDL R++ F K +EWN+ KIP+ HPAS GHG Sbjct: 314 IEGANGKPVLIAYWYKSDLKRIKDRFDVREL--KTSEDFKEWNQSKIPVAVIHPASAGHG 371 Query: 123 LNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQ 182 LNLQ GG+ L++FSL W LE ++Q R+ + G K V +++++A+ TIDE V++ Sbjct: 372 LNLQAGGSTLIWFSLTWSLELYEQTNARL-----YRQGQKETVVIHHILAKGTIDEDVMK 426 Query: 183 RLRTKSTIQDLLLNALKK 200 L K+ Q L+ A+K Sbjct: 427 ALENKNKTQAALIEAVKA 444 >gi|315656930|ref|ZP_07909817.1| SNF2 domain protein [Mobiluncus curtisii subsp. holmesii ATCC 35242] gi|315492885|gb|EFU82489.1| SNF2 domain protein [Mobiluncus curtisii subsp. holmesii ATCC 35242] Length = 458 Score = 251 bits (640), Expect = 6e-65, Method: Composition-based stats. Identities = 86/201 (42%), Positives = 119/201 (59%), Gaps = 7/201 (3%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEV 61 K Y + + +L DL G I+A N+A+ + K LQLA+GA+Y W VH+ K+ LE Sbjct: 254 KVYEQLKADLVLDLDGATIDAANAAALSGKLLQLASGAIYT-SNGQWTAVHERKLDVLED 312 Query: 62 IIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGH 121 +IE AN P++VAY F D R+ FPQ R L K I+ WN+G+I L HPAS GH Sbjct: 313 LIEAANGNPLLVAYWFTHDRQRITARFPQAREL-KTSADIETWNKGEITLGLIHPASAGH 371 Query: 122 GLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVL 181 GLNLQ GG++LV+FSL W LE +QQ R+ + G V + +L+A+ T+DE VL Sbjct: 372 GLNLQAGGHLLVWFSLTWSLELYQQTNARL-----YRQGQSEPVTITHLVAEGTLDEAVL 426 Query: 182 QRLRTKSTIQDLLLNALKKET 202 + L K Q L++A+ E Sbjct: 427 KALDAKDATQAALIDAVAHEI 447 >gi|300933478|ref|ZP_07148734.1| phage-associated protein [Corynebacterium resistens DSM 45100] Length = 453 Score = 251 bits (640), Expect = 6e-65, Method: Composition-based stats. Identities = 86/197 (43%), Positives = 119/197 (60%), Gaps = 7/197 (3%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEV 61 K Y + + E+ DL G+ I+A N+A+ + K LQLA+GA+Y DE+ + VHD K+ ALE Sbjct: 254 KAYERLRDEMVLDLDGQVIDAANAAALSGKLLQLASGAIY-DEDGNTVVVHDRKLDALED 312 Query: 62 IIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGH 121 ++E AN P++VAY F D R+ FP R L I +WN ++PL HPAS GH Sbjct: 313 LVEAANGQPLLVAYWFKHDRERITTRFPGAREL-TTSADITQWNAREVPLALIHPASAGH 371 Query: 122 GLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVL 181 GLNLQ GGN+LV+FSL W LE +QQ R+ + G + V + +L A +T+DE VL Sbjct: 372 GLNLQQGGNLLVWFSLTWSLELYQQTNARL-----YRQGQDQPVTITHLAADHTLDEAVL 426 Query: 182 QRLRTKSTIQDLLLNAL 198 L K Q L+NA+ Sbjct: 427 AALDNKDMTQAALINAV 443 >gi|255306562|ref|ZP_05350733.1| SNF2-related protein [Clostridium difficile ATCC 43255] Length = 456 Score = 250 bits (638), Expect = 9e-65, Method: Composition-based stats. Identities = 85/203 (41%), Positives = 126/203 (62%), Gaps = 9/203 (4%) Query: 1 MKQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 +K Y + ++E +L + I A ++A K LQLANGA+Y D +K+ KE+H EK++AL+ Sbjct: 255 LKYYKELEKEKILELDKDIITASSAAVAANKLLQLANGAIY-DNDKNVKELHREKLEALK 313 Query: 61 VIIEKANAAPIIVAYHFNSDLARLQKAFP--QGRTLDKDPCTIQEWNEGKIPLLFAHPAS 118 II+ +N PII+ Y++ D RL K F + RT++ + I +WN G+I LL HPAS Sbjct: 314 EIIDVSNGKPIIIFYNYKHDYNRLMKEFKSLKPRTIE-NSKDIYDWNNGRIQLLLCHPAS 372 Query: 119 CGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDE 178 GHGLNLQ GG+I+V+F L W LE +QQ R+ + G + V +++LI + TIDE Sbjct: 373 TGHGLNLQSGGSIIVWFGLTWSLELYQQANARL-----YRQGQRETVIIHHLICKGTIDE 427 Query: 179 LVLQRLRTKSTIQDLLLNALKKE 201 V++ L K Q LL A+K + Sbjct: 428 QVMEALENKDKGQSALLEAVKAK 450 >gi|259502599|ref|ZP_05745501.1| SNF2 domain protein [Lactobacillus antri DSM 16041] gi|259169414|gb|EEW53909.1| SNF2 domain protein [Lactobacillus antri DSM 16041] Length = 451 Score = 250 bits (638), Expect = 1e-64, Method: Composition-based stats. Identities = 80/199 (40%), Positives = 120/199 (60%), Gaps = 8/199 (4%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEV 61 Y + +L QG+ I+A N+AS + K Q+ANG VY D+++ ++H K+ ALE Sbjct: 253 AIYDELNAQLVVSTQGKQIDALNAASLSNKLCQMANGCVY-DDQQQIVQIHQRKLDALED 311 Query: 62 IIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGH 121 +IE AN P++VAY F DL+++++ F R + K IQ+WN G IPL HPAS GH Sbjct: 312 LIEAANGKPVLVAYWFKHDLSQIKQRF-TAREI-KTVKDIQDWNAGNIPLALIHPASAGH 369 Query: 122 GLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVL 181 GLNLQ GG L+++ L W LE +QQ R+ + G ++ V ++++I + TIDE +L Sbjct: 370 GLNLQAGGATLIWYGLTWSLELYQQTNARLW-----RQGQRQTVVIHHIITEGTIDENIL 424 Query: 182 QRLRTKSTIQDLLLNALKK 200 L+ K Q L+NA+K Sbjct: 425 AALKRKDKTQLALINAVKA 443 >gi|256847828|ref|ZP_05553273.1| superfamily II DNA/RNA helicase [Lactobacillus coleohominis 101-4-CHN] gi|256715517|gb|EEU30493.1| superfamily II DNA/RNA helicase [Lactobacillus coleohominis 101-4-CHN] Length = 451 Score = 249 bits (637), Expect = 1e-64, Method: Composition-based stats. Identities = 77/199 (38%), Positives = 115/199 (57%), Gaps = 8/199 (4%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEV 61 Y + +L QG+ I+ N+ S + K Q+ANG VY D+++ ++H K+ ALE Sbjct: 253 AIYDELNAQLVVSTQGKQIDVLNATSLSNKLCQMANGCVY-DDQQQIVQIHQRKLDALED 311 Query: 62 IIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGH 121 ++E AN P++VAY F DL +++ F K P IQ+WN G IPL HPAS GH Sbjct: 312 LVEAANGKPVLVAYWFKHDLIQIKSRFKVREI--KTPRDIQDWNAGNIPLALIHPASAGH 369 Query: 122 GLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVL 181 GLNLQ GG L+++ L W LE +QQ R+ + G ++ V ++++I + TIDE +L Sbjct: 370 GLNLQAGGATLIWYGLTWSLELYQQTNARLW-----RQGQRQPVVIHHIITEGTIDENIL 424 Query: 182 QRLRTKSTIQDLLLNALKK 200 L+ K Q L+NA+K Sbjct: 425 AALKRKDKTQLALINAVKA 443 >gi|327461127|gb|EGF07460.1| SNF2 domain protein [Streptococcus sanguinis SK1057] Length = 450 Score = 249 bits (637), Expect = 1e-64, Method: Composition-based stats. Identities = 82/200 (41%), Positives = 129/200 (64%), Gaps = 7/200 (3%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEV 61 Y +F+ E+ L+G+ ++A NSAS + K LQ+ANG VY D+ + +HD+K+ ALE Sbjct: 250 AVYKEFKAEMVVSLKGQVLDAVNSASLSNKLLQMANGMVY-DDNRKTVLLHDQKLVALEE 308 Query: 62 IIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGH 121 ++E N P+++AY F DL R+++ +P+ R + + I++WN+GKI L HPAS GH Sbjct: 309 MVESMNGRPLLIAYCFQHDLRRIKERYPEARVI-QSNQDIEDWNKGKIVLGLIHPASSGH 367 Query: 122 GLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVL 181 GLNLQ GG+ + +F L W LE +QQ+ R+ + G K V V+++I +N+IDE V+ Sbjct: 368 GLNLQAGGHTICWFGLTWSLELYQQLNARLW-----RQGQKETVVVHHIITKNSIDEQVM 422 Query: 182 QRLRTKSTIQDLLLNALKKE 201 +RL+ K Q L++A+K E Sbjct: 423 KRLKEKDISQQSLIDAVKYE 442 >gi|302873665|ref|YP_003842298.1| SNF2-related protein [Clostridium cellulovorans 743B] gi|307686611|ref|ZP_07629057.1| SNF2-related protein [Clostridium cellulovorans 743B] gi|302576522|gb|ADL50534.1| SNF2-related protein [Clostridium cellulovorans 743B] Length = 457 Score = 249 bits (637), Expect = 1e-64, Method: Composition-based stats. Identities = 84/204 (41%), Positives = 122/204 (59%), Gaps = 7/204 (3%) Query: 3 QYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVI 62 +Y K ++EL + ++ A +A + K LQ+ANGAVY DE KE+H+EK+KAL+ + Sbjct: 255 KYKKLEKELLLPFEEADVVANTAAVLSNKLLQMANGAVY-DENGEVKEIHNEKLKALDDV 313 Query: 63 IEKANAAPIIVAYHFNSDLARLQKAFP-QGRTLDKDPCTIQEWNEGKIPLLFAHPASCGH 121 IE AN I+V Y + DL RL K + + I++WN+GKIP++ HPAS GH Sbjct: 314 IEAANGKSILVFYSYKHDLERLSKHLKNKAFKVLNTSKDIEKWNKGKIPIMLVHPASAGH 373 Query: 122 GLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVL 181 GLNLQ+GGNI+V+F L W LE +QQ R+ + G + V V ++IA+ TIDE V+ Sbjct: 374 GLNLQFGGNIIVWFGLTWSLELYQQANARL-----YRQGQTQGVIVNHIIAKGTIDEEVM 428 Query: 182 QRLRTKSTIQDLLLNALKKETIHV 205 + L K Q L+ A+K + Sbjct: 429 KALENKEKGQSTLIEAVKARLKKI 452 >gi|319757800|gb|ADV69742.1| phage related DNA helicase [Streptococcus suis JS14] Length = 458 Score = 249 bits (636), Expect = 2e-64, Method: Composition-based stats. Identities = 81/205 (39%), Positives = 119/205 (58%), Gaps = 9/205 (4%) Query: 2 KQYHKFQRELYC-DLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 +Y +F++E +L G + A N+AS T K +QL+NGAVY D+ +H++K+ ALE Sbjct: 254 AKYSQFKKEYVMSELDGLEVTAANAASLTNKLVQLSNGAVYSDDH-TVVALHEQKLDALE 312 Query: 61 VIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLD---KDPCTIQEWNEGKIPLLFAHPA 117 I+E AN P++VAY F DLAR+ + R K I+EWN+G +P+ HPA Sbjct: 313 DILESANGEPVLVAYWFKHDLARIINRIEKLRVKSRVLKTEEDIREWNKGNVPVGLLHPA 372 Query: 118 SCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 GHGLNLQ GG+ LV+F L W LE +QQ R+ RQ V + +++ + TID Sbjct: 373 GAGHGLNLQKGGHNLVWFGLTWSLELYQQTNARL----WRQGQESETVVIQHIVTEGTID 428 Query: 178 ELVLQRLRTKSTIQDLLLNALKKET 202 E +L+ L K Q+ L+ A+K + Sbjct: 429 EEILKALENKDAQQERLIEAVKAQV 453 >gi|313896513|ref|ZP_07830064.1| SNF2 family N-terminal domain protein [Selenomonas sp. oral taxon 137 str. F0430] gi|312974937|gb|EFR40401.1| SNF2 family N-terminal domain protein [Selenomonas sp. oral taxon 137 str. F0430] Length = 447 Score = 249 bits (635), Expect = 2e-64, Method: Composition-based stats. Identities = 77/201 (38%), Positives = 111/201 (55%), Gaps = 7/201 (3%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEV 61 K Y + +L ++G+ + A N+ + K Q+ANGAVY D+ +HD K+ ALE Sbjct: 252 KIYTEMCDQLVLQMKGDEVTAANAGVLSGKLAQMANGAVYTDDGTTL-HIHDRKLDALED 310 Query: 62 IIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGH 121 +E N P++VAY F D R++K R I WN G+I + HPAS GH Sbjct: 311 FVESMNGKPLLVAYWFRHDAERIEKRVTCVRL--DTDDAIARWNRGEISVALIHPASAGH 368 Query: 122 GLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVL 181 GLNLQ GG+ LV+F + W LE +QQ + R+ RQ + V V ++IA+ TIDE +L Sbjct: 369 GLNLQSGGSTLVWFGITWSLELYQQTVARL----YRQGQTAKTVVVQHIIAEGTIDERIL 424 Query: 182 QRLRTKSTIQDLLLNALKKET 202 + L+ K Q L+ A+K E Sbjct: 425 RALKRKDKTQAALIEAVKAEV 445 >gi|300909460|ref|ZP_07126921.1| SNF2 domain protein [Lactobacillus reuteri SD2112] gi|300893325|gb|EFK86684.1| SNF2 domain protein [Lactobacillus reuteri SD2112] Length = 451 Score = 248 bits (634), Expect = 3e-64, Method: Composition-based stats. Identities = 80/199 (40%), Positives = 118/199 (59%), Gaps = 8/199 (4%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEV 61 Y + +L QG+ I+A N+AS + K Q+ANG VY D+++ ++H K+ ALE Sbjct: 253 AIYDELNAQLVVSAQGKQIDALNAASLSNKLCQMANGCVY-DDQQQIIQIHQRKLDALED 311 Query: 62 IIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGH 121 ++E AN P++VAY F DL +++ F K P IQ+WN GKIPL HPAS GH Sbjct: 312 LVEAANGKPVLVAYWFKHDLIQIKSRFKVREI--KTPRDIQDWNAGKIPLALIHPASAGH 369 Query: 122 GLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVL 181 GLNLQ GG L+++ L W LE +QQ R+ + G ++ V ++++I + TIDE +L Sbjct: 370 GLNLQAGGATLIWYGLTWSLELYQQTNARLW-----RQGQRQPVVIHHIITEGTIDENIL 424 Query: 182 QRLRTKSTIQDLLLNALKK 200 L+ K Q L+NA+K Sbjct: 425 AALKRKDKTQLALINAVKA 443 >gi|254975145|ref|ZP_05271617.1| SNF2-related protein [Clostridium difficile QCD-66c26] gi|255092535|ref|ZP_05322013.1| SNF2-related protein [Clostridium difficile CIP 107932] gi|255314272|ref|ZP_05355855.1| SNF2-related protein [Clostridium difficile QCD-76w55] gi|255516952|ref|ZP_05384628.1| SNF2-related protein [Clostridium difficile QCD-97b34] gi|255650054|ref|ZP_05396956.1| SNF2-related protein [Clostridium difficile QCD-37x79] gi|260683194|ref|YP_003214479.1| phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase [Clostridium difficile CD196] gi|260686790|ref|YP_003217923.1| snf2-related protein [Clostridium difficile R20291] gi|306519589|ref|ZP_07405936.1| snf2-related protein [Clostridium difficile QCD-32g58] gi|260209357|emb|CBA62788.1| phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase [Clostridium difficile CD196] gi|260212806|emb|CBE03974.1| phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase [Clostridium difficile R20291] Length = 456 Score = 248 bits (634), Expect = 3e-64, Method: Composition-based stats. Identities = 85/203 (41%), Positives = 126/203 (62%), Gaps = 9/203 (4%) Query: 1 MKQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 +K Y + ++E +L + I A ++A K LQLANGA+Y D +K+ KE+H EK++AL+ Sbjct: 255 LKYYKELEKEKILELDRDIITASSAAVAANKLLQLANGAIY-DNDKNVKELHREKLEALK 313 Query: 61 VIIEKANAAPIIVAYHFNSDLARLQKAFP--QGRTLDKDPCTIQEWNEGKIPLLFAHPAS 118 II+ +N PIIV Y++ D RL K F + RT++ + I +WN G+I LL HPAS Sbjct: 314 EIIDVSNGKPIIVFYNYKHDYNRLMKEFKSLKPRTIE-NSKDIYDWNNGRIQLLLCHPAS 372 Query: 119 CGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDE 178 GHGLNLQ GG+I+V+F L W LE +QQ R+ + G + V +++LI + TIDE Sbjct: 373 TGHGLNLQSGGSIIVWFGLTWSLELYQQANARL-----YRQGQRETVIIHHLICKGTIDE 427 Query: 179 LVLQRLRTKSTIQDLLLNALKKE 201 V++ + K Q LL A+K + Sbjct: 428 QVMEAIENKDKGQSALLEAVKAK 450 >gi|50914495|ref|YP_060467.1| Phage-related DNA helicase [Streptococcus pyogenes MGAS10394] gi|40218555|gb|AAR83209.1| phage helicase [Streptococcus pyogenes] gi|50261600|gb|AAT72368.1| helicase [Streptococcus pyogenes] gi|50903569|gb|AAT87284.1| Phage-related DNA helicase [Streptococcus pyogenes MGAS10394] Length = 458 Score = 248 bits (634), Expect = 3e-64, Method: Composition-based stats. Identities = 79/204 (38%), Positives = 118/204 (57%), Gaps = 9/204 (4%) Query: 3 QYHKFQRELYC-DLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEV 61 +Y +F++E +L G + A N+AS K +QL+NGAVY D+ +H++K+ ALE Sbjct: 255 KYIQFKKEYVLSELDGLEVTAANAASLMNKLVQLSNGAVYSDDH-TVVPLHEQKLDALED 313 Query: 62 IIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLD---KDPCTIQEWNEGKIPLLFAHPAS 118 I+E AN P++VAY F DLAR+ + + K I+EWN+G +P+ HPA Sbjct: 314 ILESANGEPVLVAYWFKHDLARITGRLEKLKVTSRVLKTEEDIREWNKGNVPVGLIHPAG 373 Query: 119 CGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDE 178 GHGLNLQ GG+ LV+F L W LE +QQ R+ RQ V + +++ + TIDE Sbjct: 374 AGHGLNLQKGGHHLVWFGLTWSLELYQQTNARL----WRQGQEAETVVIQHIVTEGTIDE 429 Query: 179 LVLQRLRTKSTIQDLLLNALKKET 202 +L+ L K Q+ L+ A+K + Sbjct: 430 EILKALGNKDAQQERLIEAVKAQV 453 >gi|134299061|ref|YP_001112557.1| SNF2-like protein [Desulfotomaculum reducens MI-1] gi|134051761|gb|ABO49732.1| SNF2-related protein [Desulfotomaculum reducens MI-1] Length = 454 Score = 248 bits (633), Expect = 4e-64, Method: Composition-based stats. Identities = 83/204 (40%), Positives = 124/204 (60%), Gaps = 7/204 (3%) Query: 3 QYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVI 62 QY + +R+L L ++ A +A K LQ+ANGAVY DE +E H K++ALE + Sbjct: 255 QYEQLERDLLLPLADGDVVANTAAVLANKLLQMANGAVY-DENGMAQEFHKAKLEALEGV 313 Query: 63 IEKANAAPIIVAYHFNSDLARLQKAFPQGRTLD-KDPCTIQEWNEGKIPLLFAHPASCGH 121 IE+A P++V Y + DL R+++ F Q + + K I+ WN+GK+ ++ AHPAS GH Sbjct: 314 IEEAAGKPVLVFYSYRHDLDRIKEHFKQYKPKELKTAEDIKNWNDGKVQIMLAHPASAGH 373 Query: 122 GLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVL 181 GLNLQ GGNI+ +FS W LE +QQ R+ + G +RAV +++L+A+ TIDE V+ Sbjct: 374 GLNLQAGGNIIAWFSTPWSLELYQQANARL-----HRQGQQRAVIIHHLVAKGTIDEDVI 428 Query: 182 QRLRTKSTIQDLLLNALKKETIHV 205 + L K Q+ LL A+K + Sbjct: 429 RVLGYKERGQNALLEAVKARIAAI 452 >gi|297583090|ref|YP_003698870.1| SNF2-like protein [Bacillus selenitireducens MLS10] gi|297141547|gb|ADH98304.1| SNF2-related protein [Bacillus selenitireducens MLS10] Length = 458 Score = 247 bits (632), Expect = 5e-64, Method: Composition-based stats. Identities = 80/201 (39%), Positives = 127/201 (63%), Gaps = 8/201 (3%) Query: 1 MKQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 M + +R+L ++GE+I A N+A+ + K LQ+ANGAVY D++ +H+ K+ ALE Sbjct: 253 MARIEAIKRDLIITVEGEDITASNAAALSGKLLQMANGAVY-DDQGQPIAIHERKLDALE 311 Query: 61 VIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCG 120 ++E AN P+++AY F DL R+Q A+ + L + +IQ+WNEG+I + HPAS G Sbjct: 312 DMVEAANGKPVLIAYWFKHDLDRIQ-AWIEATVL-SNAASIQQWNEGRIQVGLIHPASAG 369 Query: 121 HGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELV 180 HGLNLQ+GG+ L++F L W LE +QQ R+ + G +V +++LI + T+DE V Sbjct: 370 HGLNLQFGGSTLIWFGLTWSLELYQQTNARL-----YRQGQTESVAIHHLIGKGTLDERV 424 Query: 181 LQRLRTKSTIQDLLLNALKKE 201 ++ L+ K Q ++A+K E Sbjct: 425 MKALKKKDVSQTAFIDAVKAE 445 >gi|288799809|ref|ZP_06405268.1| SNF2 domain protein [Prevotella sp. oral taxon 299 str. F0039] gi|288333057|gb|EFC71536.1| SNF2 domain protein [Prevotella sp. oral taxon 299 str. F0039] Length = 458 Score = 247 bits (632), Expect = 5e-64, Method: Composition-based stats. Identities = 79/205 (38%), Positives = 127/205 (61%), Gaps = 10/205 (4%) Query: 2 KQYHKFQRELYCDL---QGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKA 58 K Y+KF+R+ +L + E I A ++A+ + K LQ + GA+Y DE+ + +H +K++A Sbjct: 256 KDYNKFERDCVLELFTEEDETITAASAAALSNKLLQFSGGAIY-DEDHNTHVIHTKKLEA 314 Query: 59 LEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLD-KDPCTIQEWNEGKIPLLFAHPA 117 LE ++E AN PI++ Y F + +R+ + F R + P TI+ WN+G+I + AHPA Sbjct: 315 LEDVVEAANGQPILLFYAFKHEESRIIEHFKNLRVVKLDTPETIKAWNKGEIDIAIAHPA 374 Query: 118 SCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 S GHGLNLQ+GGNI+V++ L W LE +QQ R+ + G + V +Y+LI++ TID Sbjct: 375 SVGHGLNLQHGGNIIVWYGLTWSLELYQQANARL-----HRQGQSKPVKIYHLISEGTID 429 Query: 178 ELVLQRLRTKSTIQDLLLNALKKET 202 E +++ L K Q+ L+ A+K Sbjct: 430 EEIVKALSNKDKTQNGLMQAVKARI 454 >gi|331007741|ref|ZP_08330867.1| hypothetical protein IMCC1989_1942 [gamma proteobacterium IMCC1989] gi|330418449|gb|EGG92989.1| hypothetical protein IMCC1989_1942 [gamma proteobacterium IMCC1989] Length = 479 Score = 247 bits (632), Expect = 6e-64, Method: Composition-based stats. Identities = 86/185 (46%), Positives = 124/185 (67%), Gaps = 5/185 (2%) Query: 18 ENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHF 77 E IE N+A+ + K LQ +NGA+Y +++ HW+ VHD K+ ALE II++A P++VAY++ Sbjct: 277 ETIEVLNAAALSNKLLQFSNGAIYTNDQGHWEAVHDLKLSALEEIIQEAAGQPVLVAYNY 336 Query: 78 NSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSL 137 SDLAR+++ FPQ + +I WN GKI LL AHPAS GHGLNLQ+GGN +V+F L Sbjct: 337 KSDLARIKEHFPQAECITDSEDSIDRWNAGKISLLLAHPASAGHGLNLQHGGNTIVWFGL 396 Query: 138 WWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 W LE +QQ R+ + G + V +++L+ +IDE V++ L++K T Q LLNA Sbjct: 397 NWSLELYQQFNARL-----HRQGQTKPVIIHHLVVNGSIDETVIEALKSKKTTQKALLNA 451 Query: 198 LKKET 202 LKK+ Sbjct: 452 LKKDI 456 >gi|76788487|ref|YP_329361.1| prophage LambdaSa04, SNF2 family helicase [Streptococcus agalactiae A909] gi|76563544|gb|ABA46128.1| prophage LambdaSa04, helicase, SNF2 family [Streptococcus agalactiae A909] Length = 458 Score = 247 bits (631), Expect = 6e-64, Method: Composition-based stats. Identities = 80/206 (38%), Positives = 120/206 (58%), Gaps = 9/206 (4%) Query: 4 YHKFQRE-LYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVI 62 Y +F+++ + DL+ + A N+AS + K +Q+ANGAVY D+ + +HD+K+ ALE I Sbjct: 256 YSQFKKDYIMADLEDTEVTAANAASLSNKLVQMANGAVYSDD-QQVVSLHDQKLDALEDI 314 Query: 63 IEKANAAPIIVAYHFNSDLARLQKAFPQGRTLD---KDPCTIQEWNEGKIPLLFAHPASC 119 IE AN P++VAY F DL R+++ + + K I+EWN+G + + HPAS Sbjct: 315 IEAANGEPVLVAYWFKHDLKRIEERLAKLKVKGTVLKTEEDIREWNKGNVSVGLLHPASS 374 Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 GHGLNLQ GG+ LV+F L W LE +QQ R+ RQ V + +++ + TIDE Sbjct: 375 GHGLNLQKGGHHLVWFGLTWSLELYQQTNARL----WRQGQQAETVVIQHIVTECTIDEE 430 Query: 180 VLQRLRTKSTIQDLLLNALKKETIHV 205 +L+ L K Q LL A+K + Sbjct: 431 ILKVLENKDAQQARLLEAVKAQVGGT 456 >gi|227875061|ref|ZP_03993206.1| helicase [Mobiluncus mulieris ATCC 35243] gi|304390304|ref|ZP_07372257.1| SNF2 domain protein [Mobiluncus curtisii subsp. curtisii ATCC 35241] gi|306817348|ref|ZP_07451093.1| SNF2 domain protein [Mobiluncus mulieris ATCC 35239] gi|227844339|gb|EEJ54503.1| helicase [Mobiluncus mulieris ATCC 35243] gi|304326060|gb|EFL93305.1| SNF2 domain protein [Mobiluncus curtisii subsp. curtisii ATCC 35241] gi|304649789|gb|EFM47069.1| SNF2 domain protein [Mobiluncus mulieris ATCC 35239] Length = 457 Score = 247 bits (631), Expect = 6e-64, Method: Composition-based stats. Identities = 87/201 (43%), Positives = 119/201 (59%), Gaps = 7/201 (3%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEV 61 K Y + + +L DL G I+A N+A+ + K LQLA+GA+Y + W VHD K+ ALE Sbjct: 254 KIYEQLKADLVLDLDGATIDAANAAALSGKLLQLASGAIYTGD-GQWAPVHDRKLDALED 312 Query: 62 IIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGH 121 + E AN +P++VAY F D R+ FPQ R L K I+ WN G+I L HPAS GH Sbjct: 313 LYEAANGSPLLVAYWFTHDRKRITARFPQAREL-KTSADIEAWNRGEIALGLIHPASAGH 371 Query: 122 GLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVL 181 GLNLQ GG++LV+FSL W LE +QQ R+ + G V + L+A+ T+DE VL Sbjct: 372 GLNLQAGGHLLVWFSLTWSLELYQQTNARL-----YRQGQSEPVTITNLVAEGTLDETVL 426 Query: 182 QRLRTKSTIQDLLLNALKKET 202 + L K Q L++A+ E Sbjct: 427 KALDAKDATQAALIDAVAAEI 447 >gi|62327356|ref|YP_224069.1| hypothetical protein BPKS7gp47 [Salmonella phage SS3e] gi|57472390|gb|AAW51252.1| hypothetical protein [Salmonella phage SS3e] Length = 474 Score = 247 bits (630), Expect = 9e-64, Method: Composition-based stats. Identities = 92/209 (44%), Positives = 138/209 (66%), Gaps = 8/209 (3%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYY-----DEEKHWKEVHDEKI 56 + Y + +L+ +L+ +EA N+A+KT KCLQ+A+GAVY + K W++VHD K+ Sbjct: 264 QAYIDMEEKLFAELESGEVEAANAAAKTSKCLQIASGAVYVSGPDGEATKEWEKVHDTKL 323 Query: 57 KALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPC---TIQEWNEGKIPLLF 113 ALE I+E+ AP++VAY F +L R+ K FPQ + K ++ WN G+I +L Sbjct: 324 DALESIVEELQGAPLLVAYQFKHELERILKRFPQAQAFSKGAKGNKQMESWNRGEIEILC 383 Query: 114 AHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQ 173 HPAS GHGLNLQ GG+ L F S W+LE + Q++ERIG RQ+QAG +R VF+Y+++A+ Sbjct: 384 VHPASAGHGLNLQDGGHHLAFISQGWNLEHYLQVVERIGPVRQKQAGHERPVFLYHIVAK 443 Query: 174 NTIDELVLQRLRTKSTIQDLLLNALKKET 202 +T+DE+V R K ++Q+ LLN +K+ Sbjct: 444 DTLDEVVAARTDEKKSVQEELLNYMKRRG 472 >gi|260161780|emb|CAZ39324.1| phage related DNA helicase [Streptococcus suis] gi|313575362|emb|CBR26891.1| hypothetical protein [Streptococcus phage phi-SsUD.1] Length = 458 Score = 246 bits (629), Expect = 1e-63, Method: Composition-based stats. Identities = 81/207 (39%), Positives = 119/207 (57%), Gaps = 9/207 (4%) Query: 3 QYHKFQRELYC-DLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEV 61 +Y +F++E +L G + A N+AS T K +QL+NGAVY D+ +H++K+ ALE Sbjct: 255 KYIQFKKEYVLSELDGLEVTAANAASLTNKLVQLSNGAVYSDDH-TVVSLHEQKLDALED 313 Query: 62 IIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLD---KDPCTIQEWNEGKIPLLFAHPAS 118 I+E AN PI+VAY F DLAR+ + + K I+EWN+G +P+ HPA Sbjct: 314 ILESANGEPILVAYWFKHDLARIMSRLEKLKLKSQVLKTEEDIREWNKGNVPVGLLHPAG 373 Query: 119 CGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDE 178 GHGLNLQ GG+ LV+F L W LE +QQ R+ RQ V + +++ + TIDE Sbjct: 374 AGHGLNLQKGGHHLVWFGLTWSLELYQQTNARL----WRQGQESETVVIQHIVTEGTIDE 429 Query: 179 LVLQRLRTKSTIQDLLLNALKKETIHV 205 +L+ L K Q+ L+ A+K + Sbjct: 430 EILKALENKDAQQERLIAAVKAQIGGT 456 >gi|315654958|ref|ZP_07907863.1| SNF2 domain protein [Mobiluncus curtisii ATCC 51333] gi|315490919|gb|EFU80539.1| SNF2 domain protein [Mobiluncus curtisii ATCC 51333] Length = 452 Score = 246 bits (629), Expect = 1e-63, Method: Composition-based stats. Identities = 77/197 (39%), Positives = 118/197 (59%), Gaps = 7/197 (3%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEV 61 K Y + E+ +L E I+A N+A K QLA+GA+Y + VH K+ ALE Sbjct: 254 KVYDRLAAEMVVELGDEVIDAVNAAVLAGKLTQLASGAIYTEAGDSIV-VHGRKLDALED 312 Query: 62 IIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGH 121 +IE AN P++VAY + DLAR+++ FPQ L K I+ WN+G+IP+ HPAS GH Sbjct: 313 LIEAANGNPVLVAYWWQHDLARIRERFPQASQL-KTSADIEAWNDGEIPIGLIHPASAGH 371 Query: 122 GLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVL 181 GLNLQ G +IL+++SL W LE +QQ R+ + G + V + ++ +++ID+ +L Sbjct: 372 GLNLQQGSSILIWYSLTWSLELYQQTNARL-----YRQGQTKPVTITHIATKDSIDQRIL 426 Query: 182 QRLRTKSTIQDLLLNAL 198 L +K+ Q L++A+ Sbjct: 427 SALESKNMTQSALIDAV 443 >gi|303239099|ref|ZP_07325629.1| SNF2-related protein [Acetivibrio cellulolyticus CD2] gi|302593437|gb|EFL63155.1| SNF2-related protein [Acetivibrio cellulolyticus CD2] Length = 452 Score = 246 bits (627), Expect = 2e-63, Method: Composition-based stats. Identities = 79/200 (39%), Positives = 114/200 (57%), Gaps = 8/200 (4%) Query: 3 QYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVI 62 Y K +RE +++A N+A K LQ++NGAVY DE + +H K++ LE + Sbjct: 255 LYRKLEREALLPFVDGDVDAVNAAVLAGKLLQMSNGAVY-DENGGVRSIHRRKLEMLEDL 313 Query: 63 IEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHG 122 IE AN P++V Y + D R+ KAF + R +D P I +WN+G+I + AHPAS GHG Sbjct: 314 IESANGKPVLVYYAYKHDRERILKAF-KARDID-TPKDISDWNDGRIGIAIAHPASAGHG 371 Query: 123 LNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQ 182 LNLQ GG+ +++F L W LE +QQ RI + G V V ++I T+DE V+ Sbjct: 372 LNLQAGGSTIIWFGLTWSLELYQQANGRI-----HRQGQTETVIVNHIITAGTMDEQVMA 426 Query: 183 RLRTKSTIQDLLLNALKKET 202 L K T Q L+NA++ Sbjct: 427 ALNRKETGQTALINAVRARM 446 >gi|227496460|ref|ZP_03926744.1| helicase [Actinomyces urogenitalis DSM 15434] gi|226834016|gb|EEH66399.1| helicase [Actinomyces urogenitalis DSM 15434] Length = 457 Score = 245 bits (626), Expect = 2e-63, Method: Composition-based stats. Identities = 77/200 (38%), Positives = 115/200 (57%), Gaps = 7/200 (3%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEV 61 Y + ++ L G ++A N+A + K LQ+A+G VY D+ EVH KI AL Sbjct: 254 AHYEALREQMVLGLDGALVDAGNAAGLSNKLLQMASGCVY-DDGGAVVEVHRAKIDALAD 312 Query: 62 IIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGH 121 +IE A+ +P++VAY + SDL RL +A P L + ++++WN G IP+ HPAS GH Sbjct: 313 LIEAASGSPVMVAYWYASDLERLLQAVPGAVEL-RSAESMRQWNAGCIPVGLIHPASAGH 371 Query: 122 GLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVL 181 GLNLQ GG+ LV+ + W LE +QQ R+ + G V +++LIA TID VL Sbjct: 372 GLNLQAGGHHLVWLTAPWSLELYQQTNARLA-----RQGQTHPVSIHHLIAAGTIDVDVL 426 Query: 182 QRLRTKSTIQDLLLNALKKE 201 + L K Q L++A++ + Sbjct: 427 RALERKDVTQSALVDAVRAQ 446 >gi|325690428|gb|EGD32431.1| SNF2 domain protein [Streptococcus sanguinis SK115] Length = 450 Score = 245 bits (626), Expect = 2e-63, Method: Composition-based stats. Identities = 81/201 (40%), Positives = 129/201 (64%), Gaps = 7/201 (3%) Query: 1 MKQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 + Y +F+ E+ ++G+ ++A NSAS + K LQ++NG VY DE + +HD+K+ ALE Sbjct: 249 LAVYKEFKTEMMVSIKGQVLDAVNSASLSNKLLQMSNGMVY-DENRKAVLLHDQKLVALE 307 Query: 61 VIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCG 120 ++E N P++VAY F DL R+++ F + R + + I++WN+GKI L HPAS G Sbjct: 308 EMVESMNNRPLLVAYWFQHDLKRIKERFSEARVI-QSNQDIEDWNKGKIVLGLVHPASSG 366 Query: 121 HGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELV 180 HGLNLQ GG+ + +F L W LE +QQ+ R+ + G K V V+++I ++T+DE V Sbjct: 367 HGLNLQAGGHTICWFGLTWSLELYQQLNARLW-----RQGQKETVVVHHIITKSTMDEQV 421 Query: 181 LQRLRTKSTIQDLLLNALKKE 201 ++RL+ K Q L++A+K E Sbjct: 422 MKRLKEKDISQQSLIDAVKYE 442 >gi|238018846|ref|ZP_04599272.1| hypothetical protein VEIDISOL_00706 [Veillonella dispar ATCC 17748] gi|237864612|gb|EEP65902.1| hypothetical protein VEIDISOL_00706 [Veillonella dispar ATCC 17748] Length = 428 Score = 245 bits (625), Expect = 3e-63, Method: Composition-based stats. Identities = 77/198 (38%), Positives = 121/198 (61%), Gaps = 8/198 (4%) Query: 3 QYHKFQRELYCDL-QGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEV 61 Y + +RE L +++ A N+A+ K LQLANG++Y D+ VH+EKI+ L+ Sbjct: 230 LYKQMEREHVLSLASDDDVSALNAAALAGKLLQLANGSIYNDD-GEIVVVHNEKIERLKE 288 Query: 62 IIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGH 121 ++E P++V Y+F DL +++AFP+ L D + +WN+G I +L AHPAS G+ Sbjct: 289 LVETNEGKPMLVFYNFKHDLQSIKEAFPKAVELKTD-DDVAKWNKGNIQMLLAHPASAGY 347 Query: 122 GLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVL 181 GLNLQ GGNI+V++ L W LE++QQ R+ + G + V +++L+ + T+DE V+ Sbjct: 348 GLNLQAGGNIIVWYGLTWSLEQYQQANARL-----HRQGQTQPVIIHHLVTKGTMDEQVM 402 Query: 182 QRLRTKSTIQDLLLNALK 199 + L K QD LL A+K Sbjct: 403 KALERKEAGQDALLEAIK 420 >gi|282534217|gb|ADA82325.1| putative helicase [Escherichia phage K1H] Length = 477 Score = 245 bits (625), Expect = 3e-63, Method: Composition-based stats. Identities = 92/209 (44%), Positives = 138/209 (66%), Gaps = 8/209 (3%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYY-----DEEKHWKEVHDEKI 56 + Y + +L+ +L+ +EA N+A+KT KCLQ+A+GAVY + K W++VHD K+ Sbjct: 267 QAYIDMEEKLFAELESGEVEAANAAAKTSKCLQIASGAVYVSGPDGEATKDWEKVHDTKL 326 Query: 57 KALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPC---TIQEWNEGKIPLLF 113 ALE I+E+ AP++VAY F +L R+ K FPQ + K ++ WN G+I +L Sbjct: 327 DALESIVEELQGAPLLVAYQFKHELERILKRFPQAQAFAKGAKGNKQMEAWNRGEIEILC 386 Query: 114 AHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQ 173 HPAS GHGLNLQ GG+ L F S W+LE + Q++ERIG RQ+QAG +R VF+Y+++A+ Sbjct: 387 VHPASAGHGLNLQDGGHHLAFISQGWNLEHYLQVVERIGPVRQKQAGHERPVFLYHIVAK 446 Query: 174 NTIDELVLQRLRTKSTIQDLLLNALKKET 202 +T+DE+V R K ++Q+ LLN +K+ Sbjct: 447 DTLDEVVAARTDEKKSVQEELLNYMKRRG 475 >gi|282535269|gb|ADA82475.1| putative helicase [Escherichia phage K1ind3] gi|282547318|gb|ADA82375.1| putative helicase [Escherichia phage K1ind1] gi|282547370|gb|ADA82426.1| putative helicase [Escherichia phage K1ind2] Length = 474 Score = 244 bits (624), Expect = 4e-63, Method: Composition-based stats. Identities = 92/209 (44%), Positives = 138/209 (66%), Gaps = 8/209 (3%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYY-----DEEKHWKEVHDEKI 56 + Y + +L+ +L+ +EA N+A+KT KCLQ+A+GAVY + K W++VHD K+ Sbjct: 264 QAYIDMEEKLFAELESGEVEAANAAAKTSKCLQIASGAVYVSGPDGEATKDWEKVHDTKL 323 Query: 57 KALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPC---TIQEWNEGKIPLLF 113 ALE I+E+ AP++VAY F +L R+ K FPQ + K ++ WN G+I +L Sbjct: 324 DALESIVEELQGAPLLVAYQFKHELERILKRFPQAQAFAKGAKGNKQMEAWNRGEIEILC 383 Query: 114 AHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQ 173 HPAS GHGLNLQ GG+ L F S W+LE + Q++ERIG RQ+QAG +R VF+Y+++A+ Sbjct: 384 VHPASAGHGLNLQDGGHHLAFISQGWNLEHYLQVVERIGPVRQKQAGHERPVFLYHIVAK 443 Query: 174 NTIDELVLQRLRTKSTIQDLLLNALKKET 202 +T+DE+V R K ++Q+ LLN +K+ Sbjct: 444 DTLDEVVAARTDEKKSVQEELLNYMKRRG 472 >gi|298346380|ref|YP_003719067.1| helicase [Mobiluncus curtisii ATCC 43063] gi|298236441|gb|ADI67573.1| helicase [Mobiluncus curtisii ATCC 43063] Length = 452 Score = 244 bits (624), Expect = 4e-63, Method: Composition-based stats. Identities = 81/197 (41%), Positives = 120/197 (60%), Gaps = 7/197 (3%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEV 61 K Y + E+ +L E I+A N+A K QLA+GA+Y + VH K+ ALE Sbjct: 254 KVYDRLAAEMVVELGDEVIDAANAAVLAGKLTQLASGAIYTEAGDSIV-VHGRKLDALED 312 Query: 62 IIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGH 121 +IE AN P++VAY + DLAR+++ FPQ R L K I+ WN G+IPL HPAS GH Sbjct: 313 LIEAANGNPVLVAYWWQHDLARIRERFPQARQL-KTSADIEAWNGGEIPLGLIHPASAGH 371 Query: 122 GLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVL 181 GLNLQ GG+IL+++SL W LE HQQ R+ + G + V + ++ +++ID+ +L Sbjct: 372 GLNLQQGGSILIWYSLTWSLELHQQTNARL-----YRQGQTKPVTITHIATKDSIDQQIL 426 Query: 182 QRLRTKSTIQDLLLNAL 198 + L +K+ Q L++A+ Sbjct: 427 RALESKNMTQSALIDAV 443 >gi|217965845|ref|YP_002351523.1| SNF2 domain protein [Listeria monocytogenes HCC23] gi|217335115|gb|ACK40909.1| SNF2 domain protein [Listeria monocytogenes HCC23] gi|307569607|emb|CAR82786.1| SNF2/RAD54 helicase family protein [Listeria monocytogenes L99] Length = 463 Score = 244 bits (624), Expect = 4e-63, Method: Composition-based stats. Identities = 80/205 (39%), Positives = 129/205 (62%), Gaps = 7/205 (3%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEV 61 QY + ++E + + ++ A ++A + K LQLANGA+Y DE + ++E+H++K++AL Sbjct: 258 AQYSELEKEFLLEFEHSDVVADSAAVLSNKLLQLANGAIY-DENQEYQEIHNKKLEALAD 316 Query: 62 IIEKANAAPIIVAYHFNSDLARLQKAFPQGR-TLDKDPCTIQEWNEGKIPLLFAHPASCG 120 IIE++ P++V Y + D R+ Q + KD +I++WN GK +L AHPAS G Sbjct: 317 IIEESVGQPVLVFYSYKHDEKRILNHLKQYKPEKIKDSRSIRKWNAGKTRVLLAHPASAG 376 Query: 121 HGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELV 180 HGLNLQ GG+I+V+F L W LE +QQ R+ + G K++V V++++A++T+DE V Sbjct: 377 HGLNLQDGGHIVVWFGLTWSLELYQQANARLF-----RQGQKKSVIVHHIVAKDTLDEKV 431 Query: 181 LQRLRTKSTIQDLLLNALKKETIHV 205 ++ L +K QD LL A+K V Sbjct: 432 IEALSSKKVGQDALLEAVKARLEKV 456 >gi|282533166|gb|ADA82275.1| putative helicase [Escherichia phage K1G] Length = 474 Score = 243 bits (620), Expect = 1e-62, Method: Composition-based stats. Identities = 92/209 (44%), Positives = 138/209 (66%), Gaps = 8/209 (3%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYY-----DEEKHWKEVHDEKI 56 + Y + +L+ +L+ +EA N+A+KT KCLQ+A+GAVY + K W++VHD K+ Sbjct: 264 QAYIDMEEKLFAELESGEVEAANAAAKTSKCLQIASGAVYVSGPDGEATKDWEKVHDMKL 323 Query: 57 KALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPC---TIQEWNEGKIPLLF 113 ALE I+E+ AP++VAY F +L R+ K FPQ + K ++ WN G+I +L Sbjct: 324 DALESIVEELQGAPLLVAYQFKHELERILKRFPQAQAFAKGAKGNKQMEAWNRGEIEILC 383 Query: 114 AHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQ 173 HPAS GHGLNLQ GG+ L F S W+LE + Q++ERIG RQ+QAG +R VF+Y+++A+ Sbjct: 384 VHPASAGHGLNLQDGGHHLAFISQGWNLEHYLQVVERIGPVRQKQAGHERPVFLYHIVAK 443 Query: 174 NTIDELVLQRLRTKSTIQDLLLNALKKET 202 +T+DE+V R K ++Q+ LLN +K+ Sbjct: 444 DTLDEVVAARTDEKKSVQEELLNYMKRRG 472 >gi|291556509|emb|CBL33626.1| Superfamily II DNA/RNA helicases, SNF2 family [Eubacterium siraeum V10Sc8a] Length = 454 Score = 242 bits (617), Expect = 3e-62, Method: Composition-based stats. Identities = 78/202 (38%), Positives = 115/202 (56%), Gaps = 10/202 (4%) Query: 3 QYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVI 62 Y + +++ DL I A N+A + K Q+ANGA+Y D+ + +H++K+ ALE I Sbjct: 255 AYDEMKKQFILDLPEGEISAANAAVLSGKLSQMANGAIY-DDAGNAVSIHEQKLDALEDI 313 Query: 63 IEKANAAPIIVAYHFNSDLARLQKAFPQG----RTLDKDPCTIQEWNEGKIPLLFAHPAS 118 IE AN P++VAY + DL R+ + + LDK +I+ WN G+I + HPAS Sbjct: 314 IESANGKPLLVAYWYQHDLERIMERLHERHIPFSKLDK-ADSIRRWNNGEISVALIHPAS 372 Query: 119 CGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDE 178 GHGLNLQ GGN +V+F L W LE + Q I R+ RQ + V V +++ TIDE Sbjct: 373 AGHGLNLQAGGNTIVWFGLTWSLELYSQTIARL----WRQGQTEETVIVQHIVTDGTIDE 428 Query: 179 LVLQRLRTKSTIQDLLLNALKK 200 +L+ L+ K Q L+ A+K Sbjct: 429 QILRALKAKDKTQSALIAAVKA 450 >gi|262113725|emb|CAR95392.1| hypothetical protein [Streptococcus phage phi-m46.1] Length = 458 Score = 242 bits (617), Expect = 3e-62, Method: Composition-based stats. Identities = 78/204 (38%), Positives = 117/204 (57%), Gaps = 9/204 (4%) Query: 3 QYHKFQRELYC-DLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEV 61 +Y +F++E +L G + A N+AS T K +QL+NGAVY D+ +H++K+ ALE Sbjct: 255 KYIQFKKEYVLSELDGLEVTAANAASLTSKLVQLSNGAVYSDDH-SVVALHEQKLDALED 313 Query: 62 IIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLD---KDPCTIQEWNEGKIPLLFAHPAS 118 I+E AN P++ AY F DLAR+ + + K I+EWN+G + + HPA Sbjct: 314 ILESANGEPVLGAYWFKHDLARILGRLEKLKVKSRVLKTEEDIREWNKGNVSVGLLHPAG 373 Query: 119 CGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDE 178 GHGLNLQ GG+ LV+F L W LE +QQ R+ RQ V + +++ + TIDE Sbjct: 374 AGHGLNLQKGGHHLVWFGLTWSLELYQQTNARL----WRQGQESETVIIQHIVTEGTIDE 429 Query: 179 LVLQRLRTKSTIQDLLLNALKKET 202 +L+ L K Q+ L+ A+K + Sbjct: 430 EILKALENKDAQQERLIAAVKAQV 453 >gi|256617084|ref|ZP_05473930.1| phage-associated helicase [Enterococcus faecalis ATCC 4200] gi|257088353|ref|ZP_05582714.1| phage-associated helicase [Enterococcus faecalis D6] gi|256596611|gb|EEU15787.1| phage-associated helicase [Enterococcus faecalis ATCC 4200] gi|256996383|gb|EEU83685.1| phage-associated helicase [Enterococcus faecalis D6] Length = 451 Score = 242 bits (617), Expect = 3e-62, Method: Composition-based stats. Identities = 83/199 (41%), Positives = 122/199 (61%), Gaps = 8/199 (4%) Query: 3 QYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVI 62 +Y KF+ +L L+ +I+A N+A + K LQ+ANGA+Y DE +HD+K+ ALE + Sbjct: 255 KYDKFKADLVLQLKDADIDAANAAVLSNKLLQMANGAIY-DEFNVSHHIHDQKLDALEDL 313 Query: 63 IEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHG 122 IE AN I++AY F DL R+++ F + K I+EWN+G IP+ HPAS GHG Sbjct: 314 IEGANGKSILIAYWFQHDLERIKERFKVRQI--KTAKDIEEWNKGNIPIGVIHPASAGHG 371 Query: 123 LNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQ 182 LNLQ GG+ LV+F L W LE +QQ R+ + G V ++++IA++TIDE V+ Sbjct: 372 LNLQAGGSTLVWFGLTWSLELYQQTNARLW-----RQGQNETVVIHHIIAKDTIDEDVML 426 Query: 183 RLRTKSTIQDLLLNALKKE 201 L+ K Q L++A+K Sbjct: 427 ALKLKDKTQASLIDAVKAR 445 >gi|266623803|ref|ZP_06116738.1| SNF2 domain protein [Clostridium hathewayi DSM 13479] gi|288864375|gb|EFC96673.1| SNF2 domain protein [Clostridium hathewayi DSM 13479] Length = 457 Score = 240 bits (612), Expect = 9e-62, Method: Composition-based stats. Identities = 74/205 (36%), Positives = 112/205 (54%), Gaps = 9/205 (4%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEV 61 K Y++ +RE+ L E I ++A+ + K LQLANGAVY DE+ EVH+ KI+A Sbjct: 255 KAYYEMEREMVLALPEEEISVTSAAALSNKLLQLANGAVY-DEDHSVHEVHNCKIEAFME 313 Query: 62 IIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLD---KDPCTIQEWNEGKIPLLFAHPAS 118 +IE P +V Y+F D AR+ KA + K +WN KI +L HPAS Sbjct: 314 LIESLQGKPALVFYNFQHDRARILKALEKTGLRVRELKTTQDEDDWNARKIDILLTHPAS 373 Query: 119 CGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDE 178 +GLNLQ GGN +++F L W+ E + Q +R+ + G + V +++LI T DE Sbjct: 374 SAYGLNLQQGGNHVIWFGLTWNYELYTQANKRL-----HRQGQEEKVIIHHLICSGTRDE 428 Query: 179 LVLQRLRTKSTIQDLLLNALKKETI 203 V++ L+ K +Q ++ +LK Sbjct: 429 DVMEALKRKDDVQSWVMESLKARIR 453 >gi|293400001|ref|ZP_06644147.1| SNF2 domain protein [Erysipelotrichaceae bacterium 5_2_54FAA] gi|291306401|gb|EFE47644.1| SNF2 domain protein [Erysipelotrichaceae bacterium 5_2_54FAA] Length = 446 Score = 237 bits (604), Expect = 8e-61, Method: Composition-based stats. Identities = 81/203 (39%), Positives = 120/203 (59%), Gaps = 9/203 (4%) Query: 1 MKQYHKFQRELYCDL-QGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKAL 59 M YH+F+RE + + I A N+ T K LQ GAVY DE +E+HD K+KAL Sbjct: 250 MVAYHRFKREKILQICEDGVITAANAGVVTNKLLQFTAGAVY-DENHEVQELHDTKLKAL 308 Query: 60 EVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD-PCTIQEWNEGKIPLLFAHPAS 118 E ++E AN P++V Y+F D R+ FP + +++WN+GKI +L HPAS Sbjct: 309 EDLLEAANGNPVMVFYYFKHDRDRIIDHFPDVEIRAIECQQDVKDWNDGKIEMLLVHPAS 368 Query: 119 CGHGLNLQYGGNILVFFSLW-WDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 GHGLNLQ GGNI+++++L W+LE + Q R+ + G + V +Y+LIA+ T+D Sbjct: 369 VGHGLNLQQGGNIIIWYTLPNWNLELYLQANARL-----HRQGQQNTVMIYHLIAKGTVD 423 Query: 178 ELVLQRLRTKSTIQDLLLNALKK 200 E +++ L K Q L+ ALK+ Sbjct: 424 EDMIRSLEQKDISQKTLIEALKR 446 >gi|237738632|ref|ZP_04569113.1| conserved hypothetical protein [Fusobacterium sp. 2_1_31] gi|229424115|gb|EEO39162.1| conserved hypothetical protein [Fusobacterium sp. 2_1_31] Length = 438 Score = 236 bits (602), Expect = 2e-60, Method: Composition-based stats. Identities = 76/207 (36%), Positives = 120/207 (57%), Gaps = 9/207 (4%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEV 61 K Y + +++ +L+ I N+A+ + K LQLANGA+Y DE + EVHD KI+ Sbjct: 227 KAYDELEKKAILELEDTEITVANAAALSNKLLQLANGAIY-DENRKVFEVHDCKIERFLE 285 Query: 62 IIEKANAAPIIVAYHFNSDLARLQKAFPQGRT---LDKDPCTIQEWNEGKIPLLFAHPAS 118 +IE+ N P +V Y+F D R+ +A + L K P +WN+G+I +L AHPAS Sbjct: 286 LIEQLNGKPALVFYNFQHDKDRIIEALKDSKLRIRLLKTPQDQLDWNKGEIDILLAHPAS 345 Query: 119 CGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDE 178 +GLNLQ GGN +++F L W LE +QQ +R+ + G V +++L+ + T DE Sbjct: 346 AAYGLNLQAGGNHVIWFGLNWSLELYQQANKRL-----HRQGQTEKVIIHHLVCKETRDE 400 Query: 179 LVLQRLRTKSTIQDLLLNALKKETIHV 205 V++ L+ K +Q+ L+ +LK + V Sbjct: 401 DVMEALQNKGDVQEALVESLKVRIMKV 427 >gi|315197730|gb|EFU28064.1| possible helicase [Staphylococcus aureus subsp. aureus CGS01] Length = 452 Score = 234 bits (598), Expect = 4e-60, Method: Composition-based stats. Identities = 80/204 (39%), Positives = 118/204 (57%), Gaps = 8/204 (3%) Query: 2 KQYHKFQRELYCDLQGE-NIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 K Y + ++ + + E + A N AS + K LQL+NGAVY DEE + +HD+K+ LE Sbjct: 254 KVYEELEKNYILESEEEGTVVAQNGASLSQKLLQLSNGAVYTDEED-VRLIHDKKLDKLE 312 Query: 61 VIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCG 120 IIE++ PI++ Y+F D R+ + F + TLD D + WN G I LL AHPAS G Sbjct: 313 EIIEESQGQPILLFYNFKHDKERILQRFKEATTLD-DSNYKERWNSGDIKLLIAHPASAG 371 Query: 121 HGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELV 180 HGLNLQ GG+I+V+F L W LE +QQ R+ + G +++++ NTID+ V Sbjct: 372 HGLNLQQGGHIIVWFGLTWSLELYQQANARL-----YRQGQNHTTIIHHIMTDNTIDQRV 426 Query: 181 LQRLRTKSTIQDLLLNALKKETIH 204 + L+ K Q+ L+ A+K Sbjct: 427 YKALQNKELTQEELMKAIKARIAK 450 >gi|161509685|ref|YP_001575344.1| helicase [Staphylococcus aureus subsp. aureus USA300_TCH1516] gi|294848484|ref|ZP_06789230.1| helicase [Staphylococcus aureus A9754] gi|160368494|gb|ABX29465.1| possible helicase [Staphylococcus aureus subsp. aureus USA300_TCH1516] gi|294824510|gb|EFG40933.1| helicase [Staphylococcus aureus A9754] gi|320140665|gb|EFW32519.1| protein, SNF2 family [Staphylococcus aureus subsp. aureus MRSA131] gi|320142763|gb|EFW34566.1| protein, SNF2 family [Staphylococcus aureus subsp. aureus MRSA177] Length = 455 Score = 234 bits (598), Expect = 5e-60, Method: Composition-based stats. Identities = 80/204 (39%), Positives = 118/204 (57%), Gaps = 8/204 (3%) Query: 2 KQYHKFQRELYCDLQGE-NIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 K Y + ++ + + E + A N AS + K LQL+NGAVY DEE + +HD+K+ LE Sbjct: 257 KVYEELEKNYILESEEEGTVVAQNGASLSQKLLQLSNGAVYTDEED-VRLIHDKKLDKLE 315 Query: 61 VIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCG 120 IIE++ PI++ Y+F D R+ + F + TLD D + WN G I LL AHPAS G Sbjct: 316 EIIEESQGQPILLFYNFKHDKERILQRFKEATTLD-DSNYKERWNSGDIKLLIAHPASAG 374 Query: 121 HGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELV 180 HGLNLQ GG+I+V+F L W LE +QQ R+ + G +++++ NTID+ V Sbjct: 375 HGLNLQQGGHIIVWFGLTWSLELYQQANARL-----YRQGQNHTTIIHHIMTDNTIDQRV 429 Query: 181 LQRLRTKSTIQDLLLNALKKETIH 204 + L+ K Q+ L+ A+K Sbjct: 430 YKALQNKELTQEELMKAIKARIAK 453 >gi|87160506|ref|YP_494105.1| phage helicase [Staphylococcus aureus subsp. aureus USA300_FPR3757] gi|87126480|gb|ABD20994.1| phage helicase [Staphylococcus aureus subsp. aureus USA300_FPR3757] Length = 423 Score = 234 bits (598), Expect = 5e-60, Method: Composition-based stats. Identities = 80/204 (39%), Positives = 118/204 (57%), Gaps = 8/204 (3%) Query: 2 KQYHKFQRELYCDLQGE-NIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 K Y + ++ + + E + A N AS + K LQL+NGAVY DEE + +HD+K+ LE Sbjct: 225 KVYEELEKNYILESEEEGTVVAQNGASLSQKLLQLSNGAVYTDEED-VRLIHDKKLDKLE 283 Query: 61 VIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCG 120 IIE++ PI++ Y+F D R+ + F + TLD D + WN G I LL AHPAS G Sbjct: 284 EIIEESQGQPILLFYNFKHDKERILQRFKEATTLD-DSNYKERWNSGDIKLLIAHPASAG 342 Query: 121 HGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELV 180 HGLNLQ GG+I+V+F L W LE +QQ R+ + G +++++ NTID+ V Sbjct: 343 HGLNLQQGGHIIVWFGLTWSLELYQQANARL-----YRQGQNHTTIIHHIMTDNTIDQRV 397 Query: 181 LQRLRTKSTIQDLLLNALKKETIH 204 + L+ K Q+ L+ A+K Sbjct: 398 YKALQNKELTQEELMKAIKARIAK 421 >gi|257432448|ref|ZP_05608811.1| SNF2 family protein [Staphylococcus aureus subsp. aureus E1410] gi|257283327|gb|EEV13459.1| SNF2 family protein [Staphylococcus aureus subsp. aureus E1410] Length = 455 Score = 234 bits (596), Expect = 7e-60, Method: Composition-based stats. Identities = 78/204 (38%), Positives = 118/204 (57%), Gaps = 8/204 (3%) Query: 2 KQYHKFQRELYCDLQGE-NIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 K Y + ++ + + E + A N AS + K LQL+NGAVY D+E + +HD+K+ LE Sbjct: 257 KVYEELEKNYILESEEEGTVVAQNGASLSQKLLQLSNGAVYTDDED-VRLIHDKKLDKLE 315 Query: 61 VIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCG 120 IIE++ PI++ Y+F D R+ + F + TL+ D + WN G I LL AHPAS G Sbjct: 316 EIIEESQGQPILLFYNFKHDKERILQRFKEATTLE-DSNYKERWNSGDIKLLIAHPASAG 374 Query: 121 HGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELV 180 HGLNLQ GG+I+V+F L W LE +QQ R+ + G +++++ NTID+ V Sbjct: 375 HGLNLQQGGHIIVWFGLTWSLELYQQANARL-----YRQGQNHTTIIHHIMTDNTIDQRV 429 Query: 181 LQRLRTKSTIQDLLLNALKKETIH 204 + L+ K Q+ L+ A+K Sbjct: 430 YKALQNKELTQEELMKAIKARIAK 453 >gi|253581729|ref|ZP_04858953.1| SNF2 domain-containing protein [Fusobacterium varium ATCC 27725] gi|251836078|gb|EES64615.1| SNF2 domain-containing protein [Fusobacterium varium ATCC 27725] Length = 459 Score = 234 bits (596), Expect = 7e-60, Method: Composition-based stats. Identities = 79/202 (39%), Positives = 127/202 (62%), Gaps = 9/202 (4%) Query: 1 MKQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 MK+Y + ++++ +L+ + I+ ++A+ + K +QLANGA+Y DE + EVH+ KI+A Sbjct: 255 MKEYEELEKKMILELEDKTIDVTSAAALSNKLMQLANGAIY-DENRGIHEVHNCKIEAFM 313 Query: 61 VIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQE---WNEGKIPLLFAHPA 117 +IEK N +V Y+F DLARLQ+A + + T+++ WN+ +I +L HPA Sbjct: 314 ELIEKLNGKAALVFYNFQHDLARLQEALKKTGLKVRILKTVEDQDAWNKKEIDILLTHPA 373 Query: 118 SCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 S +GLNLQ GGN +++F L W LE +QQ +R+ + G K V V++L+ Q+T D Sbjct: 374 SSAYGLNLQEGGNHVIWFGLNWSLELYQQANKRL-----HRQGQKEKVIVHHLVVQDTRD 428 Query: 178 ELVLQRLRTKSTIQDLLLNALK 199 E V++ L TK +Q+ LL +LK Sbjct: 429 EDVIKALNTKGDVQEALLESLK 450 >gi|66395597|ref|YP_239997.1| ORF009 [Staphylococcus phage 3A] gi|62635943|gb|AAX91054.1| ORF009 [Staphylococcus phage 3A] Length = 455 Score = 234 bits (596), Expect = 7e-60, Method: Composition-based stats. Identities = 78/204 (38%), Positives = 118/204 (57%), Gaps = 8/204 (3%) Query: 2 KQYHKFQRELYCDLQGE-NIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 K Y + ++ + + E + A N AS + K LQL+NGAVY D+E + +HD+K+ LE Sbjct: 257 KVYEELEKNYILESEEEGTVVAQNGASLSQKLLQLSNGAVYTDDED-VRLIHDKKLDKLE 315 Query: 61 VIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCG 120 IIE++ PI++ Y+F D R+ + F + TL+ D + WN G I LL AHPAS G Sbjct: 316 EIIEESQGQPILLFYNFKHDKERILQRFKEATTLE-DSNYKERWNSGDIKLLIAHPASAG 374 Query: 121 HGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELV 180 HGLNLQ GG+I+V+F L W LE +QQ R+ + G +++++ NTID+ V Sbjct: 375 HGLNLQQGGHIIVWFGLTWSLELYQQANARL-----YRQGQNHTTIIHHIMTDNTIDQRV 429 Query: 181 LQRLRTKSTIQDLLLNALKKETIH 204 + L+ K Q+ L+ A+K Sbjct: 430 YKALQNKELTQEELMKAIKARIAK 453 >gi|257428238|ref|ZP_05604636.1| SNF2 family protein [Staphylococcus aureus subsp. aureus 65-1322] gi|257275079|gb|EEV06566.1| SNF2 family protein [Staphylococcus aureus subsp. aureus 65-1322] Length = 455 Score = 234 bits (596), Expect = 8e-60, Method: Composition-based stats. Identities = 78/204 (38%), Positives = 118/204 (57%), Gaps = 8/204 (3%) Query: 2 KQYHKFQRELYCDLQGE-NIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 K Y + ++ + + E + A N AS + K LQL+NGAVY D+E + +HD+K+ LE Sbjct: 257 KVYEELEKNYILESEEEGTVVAQNGASLSQKLLQLSNGAVYTDDED-VRLIHDKKLDKLE 315 Query: 61 VIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCG 120 IIE++ PI++ Y+F D R+ + F + TL+ D + WN G I LL AHPAS G Sbjct: 316 EIIEESQGQPILLFYNFKHDKERILQRFKEATTLE-DSNYKERWNSGDIKLLIAHPASAG 374 Query: 121 HGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELV 180 HGLNLQ GG+I+V+F L W LE +QQ R+ + G +++++ NTID+ V Sbjct: 375 HGLNLQQGGHIIVWFGLTWSLELYQQANARL-----YRQGQNHTTIIHHIMTDNTIDQRV 429 Query: 181 LQRLRTKSTIQDLLLNALKKETIH 204 + L+ K Q+ L+ A+K Sbjct: 430 YKALQNKELTQEELMKAIKARIAK 453 >gi|302333125|gb|ADL23318.1| SNF2 family N-terminal domain protein [Staphylococcus aureus subsp. aureus JKD6159] Length = 452 Score = 233 bits (595), Expect = 1e-59, Method: Composition-based stats. Identities = 79/204 (38%), Positives = 118/204 (57%), Gaps = 8/204 (3%) Query: 2 KQYHKFQRELYCDLQGE-NIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 K Y + ++ + + E + A N AS + K LQL+NGAVY DEE + +HD+K+ LE Sbjct: 254 KVYEELEKNYILESEEEGTVVAQNGASLSQKLLQLSNGAVYTDEED-VRLIHDKKLDKLE 312 Query: 61 VIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCG 120 IIE++ PI++ Y+F D R+ + F + TL+ D + WN G I LL AHPAS G Sbjct: 313 EIIEESQGQPILLFYNFKHDKERILQRFKEATTLE-DSNYKERWNSGDIKLLIAHPASAG 371 Query: 121 HGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELV 180 HGLNLQ GG+I+V+F L W LE +QQ R+ + G +++++ NTID+ V Sbjct: 372 HGLNLQQGGHIIVWFGLTWSLELYQQANARL-----YRQGQNHTTIIHHIMTDNTIDQRV 426 Query: 181 LQRLRTKSTIQDLLLNALKKETIH 204 + L+ K Q+ L+ A+K Sbjct: 427 YKALQNKELTQEELMKAIKARIAK 450 >gi|21283134|ref|NP_646222.1| hypothetical protein MW1405 [Staphylococcus aureus subsp. aureus MW2] gi|49483700|ref|YP_040924.1| hypothetical protein SAR1523 [Staphylococcus aureus subsp. aureus MRSA252] gi|148267489|ref|YP_001246432.1| SNF2-related protein [Staphylococcus aureus subsp. aureus JH9] gi|150393543|ref|YP_001316218.1| SNF2-related protein [Staphylococcus aureus subsp. aureus JH1] gi|282905864|ref|ZP_06313719.1| hypothetical protein SDAG_01488 [Staphylococcus aureus subsp. aureus Btn1260] gi|282919229|ref|ZP_06326964.1| hypothetical protein SASG_00535 [Staphylococcus aureus subsp. aureus C427] gi|282921765|ref|ZP_06329482.1| conserved hypothetical protein [Staphylococcus aureus A9765] gi|282927343|ref|ZP_06334961.1| conserved hypothetical protein [Staphylococcus aureus A10102] gi|21204574|dbj|BAB95270.1| hypothetical protein [Staphylococcus aureus subsp. aureus MW2] gi|49241829|emb|CAG40521.1| hypothetical phage protein [Staphylococcus aureus subsp. aureus MRSA252] gi|147740558|gb|ABQ48856.1| SNF2-related protein [Staphylococcus aureus subsp. aureus JH9] gi|149945995|gb|ABR51931.1| SNF2-related protein [Staphylococcus aureus subsp. aureus JH1] gi|282317039|gb|EFB47413.1| hypothetical protein SASG_00535 [Staphylococcus aureus subsp. aureus C427] gi|282331156|gb|EFB60670.1| hypothetical protein SDAG_01488 [Staphylococcus aureus subsp. aureus Btn1260] gi|282590667|gb|EFB95743.1| conserved hypothetical protein [Staphylococcus aureus A10102] gi|282594027|gb|EFB99016.1| conserved hypothetical protein [Staphylococcus aureus A9765] gi|283470735|emb|CAQ49946.1| SNF2 family N-domain protein [Staphylococcus aureus subsp. aureus ST398] Length = 452 Score = 233 bits (595), Expect = 1e-59, Method: Composition-based stats. Identities = 79/204 (38%), Positives = 118/204 (57%), Gaps = 8/204 (3%) Query: 2 KQYHKFQRELYCDLQGE-NIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 K Y + ++ + + E + A N AS + K LQL+NGAVY DEE + +HD+K+ LE Sbjct: 254 KVYEELEKNYILESEEEGTVVAQNGASLSQKLLQLSNGAVYTDEED-VRLIHDKKLDKLE 312 Query: 61 VIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCG 120 IIE++ PI++ Y+F D R+ + F + TL+ D + WN G I LL AHPAS G Sbjct: 313 EIIEESQGQPILLFYNFKHDKERILQRFKEATTLE-DSNYKERWNSGDIKLLIAHPASAG 371 Query: 121 HGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELV 180 HGLNLQ GG+I+V+F L W LE +QQ R+ + G +++++ NTID+ V Sbjct: 372 HGLNLQQGGHIIVWFGLTWSLELYQQANARL-----YRQGQNHTTIIHHIMTDNTIDQRV 426 Query: 181 LQRLRTKSTIQDLLLNALKKETIH 204 + L+ K Q+ L+ A+K Sbjct: 427 YKALQNKELTQEELMKAIKARIAK 450 >gi|298693629|gb|ADI96851.1| putative DNA helicase [Staphylococcus aureus subsp. aureus ED133] Length = 455 Score = 233 bits (595), Expect = 1e-59, Method: Composition-based stats. Identities = 79/204 (38%), Positives = 118/204 (57%), Gaps = 8/204 (3%) Query: 2 KQYHKFQRELYCDLQGE-NIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 K Y K ++ + + E + A N AS + K LQL+NGAVY D+E + +HD+K+ LE Sbjct: 257 KVYEKLEKNYILESEEEGTVVAQNGASLSQKLLQLSNGAVYTDDED-VRLIHDKKLDKLE 315 Query: 61 VIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCG 120 IIE++ PI++ Y+F D R+ + F + TL+ D + WN G I LL AHPAS G Sbjct: 316 EIIEESQGQPILLFYNFKHDKERILQRFKEATTLE-DSNYKERWNSGDIKLLIAHPASAG 374 Query: 121 HGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELV 180 HGLNLQ GG+I+V+F L W LE +QQ R+ + G +++++ NTID+ V Sbjct: 375 HGLNLQQGGHIIVWFGLTWSLELYQQANARL-----YRQGQNHTTIIHHIMTDNTIDQRV 429 Query: 181 LQRLRTKSTIQDLLLNALKKETIH 204 + L+ K Q+ L+ A+K Sbjct: 430 YKALQNKELTQEELMKAIKARIAK 453 >gi|258420304|ref|ZP_05683251.1| helicase [Staphylococcus aureus A9719] gi|258448843|ref|ZP_05696953.1| phage helicase [Staphylococcus aureus A6224] gi|257843729|gb|EEV68131.1| helicase [Staphylococcus aureus A9719] gi|257857880|gb|EEV80771.1| phage helicase [Staphylococcus aureus A6224] gi|329730625|gb|EGG67010.1| SNF2 family N-terminal domain protein [Staphylococcus aureus subsp. aureus 21193] Length = 452 Score = 233 bits (594), Expect = 1e-59, Method: Composition-based stats. Identities = 79/204 (38%), Positives = 118/204 (57%), Gaps = 8/204 (3%) Query: 2 KQYHKFQRELYCDLQGE-NIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 K Y + ++ + + E + A N AS + K LQL+NGAVY DEE + +HD+K+ LE Sbjct: 254 KVYEELEKNYILESEEEGTVVAQNGASLSQKLLQLSNGAVYTDEED-VRLIHDKKLDKLE 312 Query: 61 VIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCG 120 IIE++ PI++ Y+F D R+ + F + TL+ D + WN G I LL AHPAS G Sbjct: 313 EIIEESQGQPILLFYNFKHDKERILQRFKEATTLE-DSNYKERWNSGDIKLLIAHPASAG 371 Query: 121 HGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELV 180 HGLNLQ GG+I+V+F L W LE +QQ R+ + G +++++ NTID+ V Sbjct: 372 HGLNLQQGGHIIVWFGLTWSLELYQQANARL-----YRQGQNHTTIIHHIMTDNTIDQRV 426 Query: 181 LQRLRTKSTIQDLLLNALKKETIH 204 + L+ K Q+ L+ A+K Sbjct: 427 YKALQNKELTQEELMKAIKARIAK 450 >gi|295428024|ref|ZP_06820656.1| helicase [Staphylococcus aureus subsp. aureus EMRSA16] gi|297591005|ref|ZP_06949643.1| SNF2 domain protein [Staphylococcus aureus subsp. aureus MN8] gi|300911909|ref|ZP_07129352.1| SNF2 domain protein [Staphylococcus aureus subsp. aureus TCH70] gi|295128382|gb|EFG58016.1| helicase [Staphylococcus aureus subsp. aureus EMRSA16] gi|297575891|gb|EFH94607.1| SNF2 domain protein [Staphylococcus aureus subsp. aureus MN8] gi|300886155|gb|EFK81357.1| SNF2 domain protein [Staphylococcus aureus subsp. aureus TCH70] Length = 455 Score = 233 bits (594), Expect = 1e-59, Method: Composition-based stats. Identities = 79/204 (38%), Positives = 118/204 (57%), Gaps = 8/204 (3%) Query: 2 KQYHKFQRELYCDLQGE-NIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 K Y + ++ + + E + A N AS + K LQL+NGAVY DEE + +HD+K+ LE Sbjct: 257 KVYEELEKNYILESEEEGTVVAQNGASLSQKLLQLSNGAVYTDEED-VRLIHDKKLDKLE 315 Query: 61 VIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCG 120 IIE++ PI++ Y+F D R+ + F + TL+ D + WN G I LL AHPAS G Sbjct: 316 EIIEESQGQPILLFYNFKHDKERILQRFKEATTLE-DSNYKERWNSGDIKLLIAHPASAG 374 Query: 121 HGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELV 180 HGLNLQ GG+I+V+F L W LE +QQ R+ + G +++++ NTID+ V Sbjct: 375 HGLNLQQGGHIIVWFGLTWSLELYQQANARL-----YRQGQNHTTIIHHIMTDNTIDQRV 429 Query: 181 LQRLRTKSTIQDLLLNALKKETIH 204 + L+ K Q+ L+ A+K Sbjct: 430 YKALQNKELTQEELMKAIKARIAK 453 >gi|209363583|ref|YP_002268001.1| phage helicase [Staphylococcus phage phi2958PVL] gi|208973084|dbj|BAG74400.1| phage helicase [Staphylococcus phage phi2958PVL] Length = 423 Score = 233 bits (594), Expect = 1e-59, Method: Composition-based stats. Identities = 79/204 (38%), Positives = 118/204 (57%), Gaps = 8/204 (3%) Query: 2 KQYHKFQRELYCDLQGE-NIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 K Y + ++ + + E + A N AS + K LQL+NGAVY DEE + +HD+K+ LE Sbjct: 225 KVYEELEKNYILESEEEGTVVAQNGASLSQKLLQLSNGAVYTDEED-VRLIHDKKLDKLE 283 Query: 61 VIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCG 120 IIE++ PI++ Y+F D R+ + F + TL+ D + WN G I LL AHPAS G Sbjct: 284 EIIEESQGQPILLFYNFKHDKERILQRFKEATTLE-DSNYKERWNSGDIKLLIAHPASAG 342 Query: 121 HGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELV 180 HGLNLQ GG+I+V+F L W LE +QQ R+ + G +++++ NTID+ V Sbjct: 343 HGLNLQQGGHIIVWFGLTWSLELYQQANARL-----YRQGQNHTTIIHHIMTDNTIDQRV 397 Query: 181 LQRLRTKSTIQDLLLNALKKETIH 204 + L+ K Q+ L+ A+K Sbjct: 398 YKALQNKELTQEELMKAIKARIAK 421 >gi|295407565|ref|ZP_06817358.1| helicase [Staphylococcus aureus A8819] gi|297246595|ref|ZP_06930428.1| helicase [Staphylococcus aureus A8796] gi|294967584|gb|EFG43620.1| helicase [Staphylococcus aureus A8819] gi|297176553|gb|EFH35818.1| helicase [Staphylococcus aureus A8796] Length = 455 Score = 233 bits (594), Expect = 1e-59, Method: Composition-based stats. Identities = 79/204 (38%), Positives = 118/204 (57%), Gaps = 8/204 (3%) Query: 2 KQYHKFQRELYCDLQGE-NIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 K Y + ++ + + E + A N AS + K LQL+NGAVY DEE + +HD+K+ LE Sbjct: 257 KVYEELEKNYILESEEEGTVVAQNGASLSQKLLQLSNGAVYTDEED-VRLIHDKKLDKLE 315 Query: 61 VIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCG 120 IIE++ PI++ Y+F D R+ + F + TL+ D + WN G I LL AHPAS G Sbjct: 316 EIIEESQGQPILLFYNFKHDKERILQRFKEATTLE-DSNYKERWNSGDIKLLIAHPASAG 374 Query: 121 HGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELV 180 HGLNLQ GG+I+V+F L W LE +QQ R+ + G +++++ NTID+ V Sbjct: 375 HGLNLQQGGHIIVWFGLTWSLELYQQANARL-----YRQGQNHTTIIHHIMTDNTIDQRV 429 Query: 181 LQRLRTKSTIQDLLLNALKKETIH 204 + L+ K Q+ L+ A+K Sbjct: 430 YKALQNKELTQEELMKAIKARIAK 453 >gi|284024515|ref|ZP_06378913.1| SNF2-related protein [Staphylococcus aureus subsp. aureus 132] Length = 452 Score = 233 bits (594), Expect = 1e-59, Method: Composition-based stats. Identities = 79/204 (38%), Positives = 118/204 (57%), Gaps = 8/204 (3%) Query: 2 KQYHKFQRELYCDLQGE-NIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 K Y + ++ + + E + A N AS + K LQL+NGAVY DEE + +HD+K+ LE Sbjct: 254 KVYEELEKNYILESEEEGTVVAQNGASLSQKLLQLSNGAVYTDEED-VRLIHDKKLDKLE 312 Query: 61 VIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCG 120 IIE++ PI++ Y+F D R+ + F + TL+ D + WN G I LL AHPAS G Sbjct: 313 EIIEESQGQPILLFYNFKHDKERILQRFKEATTLE-DSNYKERWNSGDIKLLIAHPASAG 371 Query: 121 HGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELV 180 HGLNLQ GG+I+V+F L W LE +QQ R+ + G +++++ NTID+ V Sbjct: 372 HGLNLQQGGHIIVWFGLTWSLELYQQANARL-----YRQGQNHTTIIHHIMTDNTIDQRV 426 Query: 181 LQRLRTKSTIQDLLLNALKKETIH 204 + L+ K Q+ L+ A+K Sbjct: 427 YKALQNKELTQEELMKAIKARIAK 450 >gi|315128428|gb|EFT84436.1| SNF2 family N-terminal domain protein [Staphylococcus aureus subsp. aureus CGS03] gi|329729408|gb|EGG65813.1| SNF2 family N-terminal domain protein [Staphylococcus aureus subsp. aureus 21189] Length = 452 Score = 232 bits (593), Expect = 2e-59, Method: Composition-based stats. Identities = 78/204 (38%), Positives = 118/204 (57%), Gaps = 8/204 (3%) Query: 2 KQYHKFQRELYCDLQGE-NIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 K Y + ++ + + E + A N AS + K LQL+NGAVY D+E + +HD+K+ LE Sbjct: 254 KVYAELEKNYILESEEEGTVVAQNGASLSQKLLQLSNGAVYTDDED-VRLIHDKKLDKLE 312 Query: 61 VIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCG 120 IIE++ PI++ Y+F D R+ + F + TL+ D + WN G I LL AHPAS G Sbjct: 313 EIIEESQGQPILLFYNFKHDKERILQRFKEATTLE-DSNYKERWNSGDIKLLIAHPASAG 371 Query: 121 HGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELV 180 HGLNLQ GG+I+V+F L W LE +QQ R+ + G +++++ NTID+ V Sbjct: 372 HGLNLQQGGHIIVWFGLTWSLELYQQANARL-----YRQGQNHTTIIHHIMTDNTIDQRV 426 Query: 181 LQRLRTKSTIQDLLLNALKKETIH 204 + L+ K Q+ L+ A+K Sbjct: 427 YKALQNKELTQEELMKAIKARIAK 450 >gi|258427143|ref|ZP_05688065.1| SNF2 family protein [Staphylococcus aureus A9299] gi|257849921|gb|EEV73880.1| SNF2 family protein [Staphylococcus aureus A9299] Length = 455 Score = 232 bits (593), Expect = 2e-59, Method: Composition-based stats. Identities = 78/204 (38%), Positives = 118/204 (57%), Gaps = 8/204 (3%) Query: 2 KQYHKFQRELYCDLQGE-NIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 K Y + ++ + + E + A N AS + K LQL+NGAVY D+E + +HD+K+ LE Sbjct: 257 KVYAELEKNYILESEEEGTVVAQNGASLSQKLLQLSNGAVYTDDED-VRLIHDKKLDKLE 315 Query: 61 VIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCG 120 IIE++ PI++ Y+F D R+ + F + TL+ D + WN G I LL AHPAS G Sbjct: 316 EIIEESQGQPILLFYNFKHDKERILQRFKEATTLE-DSNYKERWNSGDIKLLIAHPASAG 374 Query: 121 HGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELV 180 HGLNLQ GG+I+V+F L W LE +QQ R+ + G +++++ NTID+ V Sbjct: 375 HGLNLQQGGHIIVWFGLTWSLELYQQANARL-----YRQGQNHTTIIHHIMTDNTIDQRV 429 Query: 181 LQRLRTKSTIQDLLLNALKKETIH 204 + L+ K Q+ L+ A+K Sbjct: 430 YKALQNKELTQEELMKAIKARIAK 453 >gi|66395458|ref|YP_239852.1| ORF008 [Staphylococcus phage 2638A] gi|62635885|gb|AAX90996.1| ORF008 [Staphylococcus phage 2638A] Length = 452 Score = 232 bits (593), Expect = 2e-59, Method: Composition-based stats. Identities = 76/204 (37%), Positives = 116/204 (56%), Gaps = 8/204 (3%) Query: 2 KQYHKFQRELYCDLQGE-NIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 K Y + ++ + + + I A + AS + K LQL+NGAVY D+E + +HD K+ LE Sbjct: 254 KLYDELEKHYILESEEDGTIVAQSGASLSQKLLQLSNGAVYTDDE-SVRHLHDRKLDKLE 312 Query: 61 VIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCG 120 IIE++ P++V Y+F D R+ + F + TL D W +GK+ +L AHPAS G Sbjct: 313 EIIEESQGQPLLVFYNFKHDKERIMERFDEVVTLG-DESYKDRWIKGKVKILLAHPASAG 371 Query: 121 HGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELV 180 HGLNLQ GG+I+V+F L W LE +QQ R+ + G +++++ NTID+ V Sbjct: 372 HGLNLQKGGHIIVWFGLTWSLELYQQANARL-----YRQGQTHTTIIHHIMTDNTIDQKV 426 Query: 181 LQRLRTKSTIQDLLLNALKKETIH 204 Q L+ K Q+ L+ A+K Sbjct: 427 YQALQNKELTQEDLMQAIKARIKQ 450 >gi|29028643|ref|NP_803332.1| helicase [Staphylococcus phage phi 12] gi|18920567|gb|AAL82307.1| phage helicase [Staphylococcus phage phi 12] Length = 423 Score = 232 bits (593), Expect = 2e-59, Method: Composition-based stats. Identities = 78/204 (38%), Positives = 118/204 (57%), Gaps = 8/204 (3%) Query: 2 KQYHKFQRELYCDLQGE-NIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 K Y + ++ + + E + A N AS + K LQL+NGAVY D+E + +HD+K+ LE Sbjct: 225 KVYAELEKNYILESEEEGTVVAQNGASLSQKLLQLSNGAVYTDDED-VRLIHDKKLDKLE 283 Query: 61 VIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCG 120 IIE++ PI++ Y+F D R+ + F + TL+ D + WN G I LL AHPAS G Sbjct: 284 EIIEESQGQPILLFYNFKHDKERILQRFKEATTLE-DSNYKERWNSGDIKLLIAHPASAG 342 Query: 121 HGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELV 180 HGLNLQ GG+I+V+F L W LE +QQ R+ + G +++++ NTID+ V Sbjct: 343 HGLNLQQGGHIIVWFGLTWSLELYQQANARL-----YRQGQNHTTIIHHIMTDNTIDQRV 397 Query: 181 LQRLRTKSTIQDLLLNALKKETIH 204 + L+ K Q+ L+ A+K Sbjct: 398 YKALQNKELTQEELMKAIKARIAK 421 >gi|66395664|ref|YP_240070.1| ORF008 [Staphylococcus phage 47] gi|88195255|ref|YP_500058.1| SNF2 family protein [Staphylococcus aureus subsp. aureus NCTC 8325] gi|258445562|ref|ZP_05693744.1| phage helicase [Staphylococcus aureus A6300] gi|258455568|ref|ZP_05703525.1| conserved hypothetical protein [Staphylococcus aureus A5937] gi|297207823|ref|ZP_06924257.1| SNF2 domain protein [Staphylococcus aureus subsp. aureus ATCC 51811] gi|62636088|gb|AAX91199.1| ORF008 [Staphylococcus phage 47] gi|87202813|gb|ABD30623.1| SNF2 family N-terminal domain protein [Staphylococcus aureus subsp. aureus NCTC 8325] gi|257855609|gb|EEV78542.1| phage helicase [Staphylococcus aureus A6300] gi|257862256|gb|EEV85027.1| conserved hypothetical protein [Staphylococcus aureus A5937] gi|296887539|gb|EFH26438.1| SNF2 domain protein [Staphylococcus aureus subsp. aureus ATCC 51811] Length = 455 Score = 232 bits (593), Expect = 2e-59, Method: Composition-based stats. Identities = 78/204 (38%), Positives = 118/204 (57%), Gaps = 8/204 (3%) Query: 2 KQYHKFQRELYCDLQGE-NIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 K Y + ++ + + E + A N AS + K LQL+NGAVY D+E + +HD+K+ LE Sbjct: 257 KVYAELEKNYILESEEEGTVVAQNGASLSQKLLQLSNGAVYTDDED-VRLIHDKKLDKLE 315 Query: 61 VIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCG 120 IIE++ PI++ Y+F D R+ + F + TL+ D + WN G I LL AHPAS G Sbjct: 316 EIIEESQGQPILLFYNFKHDKERILQRFKEATTLE-DSNYKERWNSGDIKLLIAHPASAG 374 Query: 121 HGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELV 180 HGLNLQ GG+I+V+F L W LE +QQ R+ + G +++++ NTID+ V Sbjct: 375 HGLNLQQGGHIIVWFGLTWSLELYQQANARL-----YRQGQNHTTIIHHIMTDNTIDQRV 429 Query: 181 LQRLRTKSTIQDLLLNALKKETIH 204 + L+ K Q+ L+ A+K Sbjct: 430 YKALQNKELTQEELMKAIKARIAK 453 >gi|304406781|ref|ZP_07388436.1| SNF2-related protein [Paenibacillus curdlanolyticus YK9] gi|304344314|gb|EFM10153.1| SNF2-related protein [Paenibacillus curdlanolyticus YK9] Length = 467 Score = 232 bits (592), Expect = 2e-59, Method: Composition-based stats. Identities = 79/207 (38%), Positives = 118/207 (57%), Gaps = 9/207 (4%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEV 61 K Y K +++L ++G I A ++A T K LQL NGA+Y D ++ E+HD KI+A Sbjct: 265 KLYDKLEKDLLLQVEGTEITATSAAVLTGKLLQLCNGALY-DGDRQVHEIHDNKIEAFME 323 Query: 62 IIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD---PCTIQEWNEGKIPLLFAHPAS 118 +IE+ N +V Y + DLAR++ A + ++ P +WN G++ +L AHPAS Sbjct: 324 LIEQLNGKSALVFYSYQHDLARIKSALSKSGLRIRELSTPQDQLDWNAGEVDILLAHPAS 383 Query: 119 CGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDE 178 +GLNLQ GGN +V+F L W LE +QQ R+ + G K+ V +++L+ Q DE Sbjct: 384 AAYGLNLQDGGNHVVWFGLNWSLELYQQANGRL-----HRQGQKQKVILHHLVVQGGADE 438 Query: 179 LVLQRLRTKSTIQDLLLNALKKETIHV 205 V+ L K+ +QD LL ALK V Sbjct: 439 DVMAALEGKAAMQDKLLEALKARIERV 465 >gi|49485834|ref|YP_043055.1| hypothetical protein SAS0928 [Staphylococcus aureus subsp. aureus MSSA476] gi|49244277|emb|CAG42704.1| hypothetical phage protein [Staphylococcus aureus subsp. aureus MSSA476] Length = 455 Score = 232 bits (592), Expect = 2e-59, Method: Composition-based stats. Identities = 79/200 (39%), Positives = 118/200 (59%), Gaps = 8/200 (4%) Query: 2 KQYHKFQRELYCDLQGE-NIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 K Y + ++ + + E + A N AS + K LQL+NGAVY DEE + +HD+K+ LE Sbjct: 254 KVYEELEKNYILESEEEGTVVAQNGASLSQKLLQLSNGAVYTDEED-VRLIHDKKLDKLE 312 Query: 61 VIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCG 120 IIE++ PI++ Y+F D R+ + F + TL+ D + WN G I LL AHPAS G Sbjct: 313 EIIEESQGQPILLFYNFKHDKERILQRFKEATTLE-DSNYKERWNSGDIKLLIAHPASAG 371 Query: 121 HGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELV 180 HGLNLQ GG+I+V+F L W LE +QQ R+ + G +++++ NTID+ V Sbjct: 372 HGLNLQQGGHIIVWFGLTWSLELYQQANARL-----YRQGQNHTTIIHHIMTDNTIDQRV 426 Query: 181 LQRLRTKSTIQDLLLNALKK 200 + L+ K Q+ L+ A+K Sbjct: 427 YKALQNKELTQEELMKAIKA 446 >gi|312897717|ref|ZP_07757133.1| protein, SNF2 family [Megasphaera micronuciformis F0359] gi|310621101|gb|EFQ04645.1| protein, SNF2 family [Megasphaera micronuciformis F0359] Length = 463 Score = 232 bits (592), Expect = 2e-59, Method: Composition-based stats. Identities = 79/209 (37%), Positives = 125/209 (59%), Gaps = 11/209 (5%) Query: 2 KQYHKFQRELYCDL--QGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKAL 59 + Y + + + +L GE I A ++A+ + K QLANGAVY DE ++ E+HD KI+A Sbjct: 254 RDYDEMETRMVLELVESGEEITAVSAAALSTKLQQLANGAVY-DELRNVHEIHDCKIEAF 312 Query: 60 EVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD---PCTIQEWNEGKIPLLFAHP 116 + +IE+ + P +V Y+F DL RL+ A + + + K+ +EWNEGKI +L AHP Sbjct: 313 KELIEQLSGKPALVFYNFKHDLERLKAALDKSKLIVKELKGATEEREWNEGKIDVLLAHP 372 Query: 117 ASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTI 176 AS +GLNLQ GGN +++F L W LE +QQ +R+ + G + V +++LI+ T Sbjct: 373 ASTAYGLNLQDGGNHVIWFGLNWSLELYQQANKRL-----HRQGQREKVIIHHLISIGTR 427 Query: 177 DELVLQRLRTKSTIQDLLLNALKKETIHV 205 DE +++ L K+ Q+ +L +LK V Sbjct: 428 DEDMMEALNRKADAQEYVLQSLKARIDKV 456 >gi|296276324|ref|ZP_06858831.1| SNF2 family protein [Staphylococcus aureus subsp. aureus MR1] Length = 455 Score = 231 bits (590), Expect = 3e-59, Method: Composition-based stats. Identities = 78/200 (39%), Positives = 118/200 (59%), Gaps = 8/200 (4%) Query: 2 KQYHKFQRELYCDLQGE-NIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 K Y + ++ + + E + A N AS + K LQL+NGAVY D+E + +HD+K+ LE Sbjct: 254 KVYAELEKNYILESEEEGTVVAQNGASLSQKLLQLSNGAVYTDDED-VRLIHDKKLDKLE 312 Query: 61 VIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCG 120 IIE++ PI++ Y+F D R+ + F + TL+ D + WN G I LL AHPAS G Sbjct: 313 EIIEESQGQPILLFYNFKHDKERILQRFKEATTLE-DSNYKERWNSGDIKLLIAHPASAG 371 Query: 121 HGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELV 180 HGLNLQ GG+I+V+F L W LE +QQ R+ + G +++++ NTID+ V Sbjct: 372 HGLNLQQGGHIIVWFGLTWSLELYQQANARL-----YRQGQNHTTIIHHIMTDNTIDQRV 426 Query: 181 LQRLRTKSTIQDLLLNALKK 200 + L+ K Q+ L+ A+K Sbjct: 427 YKALQNKELTQEELMKAIKA 446 >gi|225405817|ref|ZP_03761006.1| hypothetical protein CLOSTASPAR_05038 [Clostridium asparagiforme DSM 15981] gi|225042657|gb|EEG52903.1| hypothetical protein CLOSTASPAR_05038 [Clostridium asparagiforme DSM 15981] Length = 459 Score = 231 bits (589), Expect = 4e-59, Method: Composition-based stats. Identities = 68/208 (32%), Positives = 113/208 (54%), Gaps = 11/208 (5%) Query: 1 MKQYHKFQRELYCDLQGEN--IEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKA 58 + Y + +R++ +L + I ++A+ + K LQLANGAVY DE++ E+H KI+A Sbjct: 254 LNAYTELERKMILELPEDESDISVTSAAALSNKLLQLANGAVY-DEDRTVHEIHGCKIEA 312 Query: 59 LEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD---PCTIQEWNEGKIPLLFAH 115 +IE P +V Y++ D R+ KA + ++ P +WN KI +L H Sbjct: 313 FLELIESLQGKPALVFYNYQHDRERILKALAGSKLRIRELKKPQDEDDWNARKIDILLTH 372 Query: 116 PASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNT 175 PAS +GLNLQ GGN +++F L W+ E + Q +R+ + G V +++L+ T Sbjct: 373 PASSAYGLNLQQGGNHVIWFGLTWNYELYTQANKRL-----HRQGQTEKVIIHHLVCSGT 427 Query: 176 IDELVLQRLRTKSTIQDLLLNALKKETI 203 DE V+Q L+ K +Q+ ++ +LK Sbjct: 428 RDEDVMQALQRKDDVQNWVMESLKARIR 455 >gi|269120031|ref|YP_003308208.1| SNF2-related protein [Sebaldella termitidis ATCC 33386] gi|268613909|gb|ACZ08277.1| SNF2-related protein [Sebaldella termitidis ATCC 33386] Length = 458 Score = 230 bits (588), Expect = 6e-59, Method: Composition-based stats. Identities = 77/206 (37%), Positives = 120/206 (58%), Gaps = 11/206 (5%) Query: 2 KQYHKFQRELYCDL--QGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKAL 59 K Y + ++E+ +L GE I+ ++A+ T K LQL+NGAVY DE++ EVH+ KI+A Sbjct: 254 KAYDELEKEMILELIETGETIDVTSAAALTNKLLQLSNGAVY-DEDRKVHEVHNCKIEAF 312 Query: 60 EVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD---PCTIQEWNEGKIPLLFAHP 116 ++E N P +V Y F D R++KA + + ++ + +WN +I +L +HP Sbjct: 313 MELVEALNGQPALVFYSFQHDKDRIKKALSKLKLRVRELKTDQDVTDWNNREIDILLSHP 372 Query: 117 ASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTI 176 AS +GLNLQ GGN +++F L W LE +QQ +R+ + G VF+++LI + T Sbjct: 373 ASSAYGLNLQRGGNHIIWFGLNWSLELYQQANKRL-----HRQGQTEKVFIHHLITEGTR 427 Query: 177 DELVLQRLRTKSTIQDLLLNALKKET 202 D V+ L K IQ+ LLN+LK Sbjct: 428 DTDVMAALGDKGDIQESLLNSLKARI 453 >gi|160935260|ref|ZP_02082643.1| hypothetical protein CLOBOL_00156 [Clostridium bolteae ATCC BAA-613] gi|158441991|gb|EDP19688.1| hypothetical protein CLOBOL_00156 [Clostridium bolteae ATCC BAA-613] Length = 456 Score = 230 bits (588), Expect = 7e-59, Method: Composition-based stats. Identities = 83/207 (40%), Positives = 121/207 (58%), Gaps = 9/207 (4%) Query: 1 MKQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 M++Y + ++E +L G+ I A ++A+ K LQLANGA Y D E + +HD K+ AL Sbjct: 253 MRKYRELEKEKLLELDGKEITALSAAAVWGKLLQLANGAAY-DGEGNVIPLHDRKLDALA 311 Query: 61 VIIEKANAAPIIVAYHFNSDLARLQKAFPQ--GRTLDKDPCTIQEWNEGKIPLLFAHPAS 118 I+E + P++V Y+F D RL F RTL K I++WNEG+IPLL A PAS Sbjct: 312 EILEASGGHPVLVFYNFRHDYDRLMGRFKGYNPRTL-KSQQDIRDWNEGRIPLLLAQPAS 370 Query: 119 CGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDE 178 GHGLN+Q GG+I+V+F L LE + Q R+ + G AV ++ LI + T+DE Sbjct: 371 MGHGLNIQAGGHIIVWFGLNPSLELYLQANARL-----HRQGQTEAVIIHRLITKGTVDE 425 Query: 179 LVLQRLRTKSTIQDLLLNALKKETIHV 205 V+++L K QD L+ +LK + Sbjct: 426 DVVKKLWVKDETQDGLMESLKARIRRI 452 >gi|70726780|ref|YP_253694.1| hypothetical protein SH1779 [Staphylococcus haemolyticus JCSC1435] gi|68447504|dbj|BAE05088.1| unnamed protein product [Staphylococcus haemolyticus JCSC1435] Length = 452 Score = 228 bits (582), Expect = 3e-58, Method: Composition-based stats. Identities = 79/202 (39%), Positives = 115/202 (56%), Gaps = 8/202 (3%) Query: 2 KQYHKFQRELYCDLQ-GENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 K Y + ++ + + I A + AS + K LQL+NGAVY D+E + +HD K+ LE Sbjct: 254 KLYDELEKYYILEDETDGTIVAQSGASLSQKILQLSNGAVYTDDED-VRHIHDRKLDKLE 312 Query: 61 VIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCG 120 II++A PI++ Y+F D R+ + F TLD D +WN GK +L AHPAS G Sbjct: 313 EIIDEAQGQPILLFYNFKHDRDRILERFDDVLTLD-DKGYKDKWNSGKAKILLAHPASAG 371 Query: 121 HGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELV 180 HGLNLQ GG+I+V+F L W LE +QQ R+ + G +++++ NTID+ V Sbjct: 372 HGLNLQQGGHIIVWFGLTWSLELYQQANARL-----YRQGQTHTTIIHHIMTDNTIDQRV 426 Query: 181 LQRLRTKSTIQDLLLNALKKET 202 Q L+ K QD L+ A+K Sbjct: 427 YQALQNKELTQDELMKAIKARI 448 >gi|160898846|ref|YP_001564428.1| helicase-like protein [Delftia acidovorans SPH-1] gi|160364430|gb|ABX36043.1| helicase-like protein [Delftia acidovorans SPH-1] Length = 477 Score = 227 bits (578), Expect = 9e-58, Method: Composition-based stats. Identities = 92/200 (46%), Positives = 138/200 (69%), Gaps = 2/200 (1%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEV 61 +QY + REL ++ G+ IEAF++ +K+ K LQ+A+GA Y D++ W VHDEKI+AL+ Sbjct: 275 RQYDEMARELATEIDGQVIEAFSAGTKSQKLLQIASGAAYTDDQGAWALVHDEKIEALKS 334 Query: 62 IIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGH 121 ++E+A P++V YHF SDLAR++KAFP+ RTLD D +++ G++ +L HPAS GH Sbjct: 335 VVEEALGMPLLVFYHFKSDLARIRKAFPKARTLD-DKGAKEDFEAGRLQMLVVHPASAGH 393 Query: 122 GLN-LQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELV 180 G++ LQ+G VFFS W E Q IERIG TRQ Q+G+ R V V+ L+A++T++E Sbjct: 394 GVDGLQHGTCQCVFFSTNWSAENDAQAIERIGPTRQMQSGYDRPVTVHRLVARDTVEESA 453 Query: 181 LQRLRTKSTIQDLLLNALKK 200 + RLR++ ++ + L LKK Sbjct: 454 MYRLRSRVSVDEALRQGLKK 473 >gi|325684273|gb|EGD26446.1| SNF2 domain protein [Lactobacillus delbrueckii subsp. lactis DSM 20072] Length = 633 Score = 226 bits (577), Expect = 1e-57, Method: Composition-based stats. Identities = 77/203 (37%), Positives = 121/203 (59%), Gaps = 10/203 (4%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEV 61 K Y + +++ DL G+ I A N+A + QLA+GA+Y ++ +H++E+ DEKI+ Sbjct: 434 KSYQQLKKDQVLDLPGQEISAENAAVLAGRLRQLASGAIYEEDGEHYQEIFDEKIECC-F 492 Query: 62 IIEKANAAPIIVAYHFNSDLARL----QKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPA 117 + A P +VAY+F SD +RL +K + D P I+ WN+GKIP++ PA Sbjct: 493 YLTSNTATPSLVAYYFKSDASRLLAFYRKNGVKAELFDGSPGMIRRWNKGKIPVMLVQPA 552 Query: 118 SCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 S G GLNLQ GG+ L++F+L W LE++QQM R+ + G K+ V +++L+ + TID Sbjct: 553 SAGAGLNLQEGGHTLIWFTLPWSLEQYQQMNGRL-----YRQGQKKPVIIHHLLTKGTID 607 Query: 178 ELVLQRLRTKSTIQDLLLNALKK 200 VL L+ K Q LL A+++ Sbjct: 608 RHVLDSLKKKDLSQQALLAAVRR 630 >gi|300812688|ref|ZP_07093097.1| SNF2 family N-terminal domain protein [Lactobacillus delbrueckii subsp. bulgaricus PB2003/044-T3-4] gi|300496315|gb|EFK31428.1| SNF2 family N-terminal domain protein [Lactobacillus delbrueckii subsp. bulgaricus PB2003/044-T3-4] Length = 636 Score = 223 bits (569), Expect = 9e-57, Method: Composition-based stats. Identities = 76/203 (37%), Positives = 121/203 (59%), Gaps = 10/203 (4%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEV 61 K Y + +++ DL G+ I A N+A + QLA+GA+Y ++ +H++E+ EKI++ Sbjct: 437 KSYQQLKKDQVLDLPGQEISADNAAVLAGRLRQLASGAIYEEDGEHYQEIFAEKIESC-F 495 Query: 62 IIEKANAAPIIVAYHFNSDLARL----QKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPA 117 + A P +VAY+F SD +RL +K + D P I+ WN+GKIP++ PA Sbjct: 496 YLTSNTATPSLVAYYFKSDASRLLAFYRKNGVKAELFDGSPGMIRRWNKGKIPVMLVQPA 555 Query: 118 SCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 S G GLNLQ GG+ L++F+L W LE++QQM R+ + G K+ V +++L+ + TID Sbjct: 556 SAGAGLNLQEGGHTLIWFTLPWSLEQYQQMNGRL-----YRQGQKKPVIIHHLLTKGTID 610 Query: 178 ELVLQRLRTKSTIQDLLLNALKK 200 VL L+ K Q LL A+++ Sbjct: 611 RHVLDSLKKKDLSQQALLAAVRR 633 >gi|104773892|ref|YP_618872.1| hypothetical protein Ldb0824 [Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842] gi|103422973|emb|CAI97646.1| Hypothetical protein Ldb0824 [Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842] Length = 638 Score = 223 bits (569), Expect = 1e-56, Method: Composition-based stats. Identities = 76/203 (37%), Positives = 121/203 (59%), Gaps = 10/203 (4%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEV 61 K Y + +++ DL G+ I A N+A + QLA+GA+Y ++ +H++E+ EKI++ Sbjct: 439 KSYQQLKKDQVLDLPGQEISAENAAVLAGRLRQLASGAIYEEDGEHYQEIFAEKIESC-F 497 Query: 62 IIEKANAAPIIVAYHFNSDLARL----QKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPA 117 + A P +VAY+F SD +RL +K + D P I+ WN+GKIP++ PA Sbjct: 498 YLTSNTATPSLVAYYFKSDASRLLAFYRKNGVKAELFDSSPGMIRRWNKGKIPVMLVQPA 557 Query: 118 SCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 S G GLNLQ GG+ L++F+L W LE++QQM R+ + G K+ V +++L+ + TID Sbjct: 558 SAGAGLNLQEGGHTLIWFTLPWSLEQYQQMNGRL-----YRQGQKKPVIIHHLLTKGTID 612 Query: 178 ELVLQRLRTKSTIQDLLLNALKK 200 VL L+ K Q LL A+++ Sbjct: 613 RHVLDSLKKKDLSQQALLAAVRR 635 >gi|116513899|ref|YP_812805.1| SNF2 family DNA/RNA helicase [Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365] gi|116093214|gb|ABJ58367.1| Superfamily II DNA/RNA helicase, SNF2 family [Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365] gi|325125562|gb|ADY84892.1| SNF2 domain protein [Lactobacillus delbrueckii subsp. bulgaricus 2038] Length = 638 Score = 223 bits (568), Expect = 1e-56, Method: Composition-based stats. Identities = 76/203 (37%), Positives = 121/203 (59%), Gaps = 10/203 (4%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEV 61 K Y + +++ DL G+ I A N+A + QLA+GA+Y ++ +H++E+ EKI++ Sbjct: 439 KSYQQLKKDQVLDLPGQEISAENAAVLAGRLRQLASGAIYEEDGEHYQEIFAEKIESC-F 497 Query: 62 IIEKANAAPIIVAYHFNSDLARL----QKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPA 117 + A P +VAY+F SD +RL +K + D P I+ WN+GKIP++ PA Sbjct: 498 YLTSNTATPSLVAYYFKSDASRLLAFYRKNGVKAELFDGSPGMIRRWNKGKIPVMLVQPA 557 Query: 118 SCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 S G GLNLQ GG+ L++F+L W LE++QQM R+ + G K+ V +++L+ + TID Sbjct: 558 SAGAGLNLQEGGHTLIWFTLPWSLEQYQQMNGRL-----YRQGQKKPVIIHHLLTKGTID 612 Query: 178 ELVLQRLRTKSTIQDLLLNALKK 200 VL L+ K Q LL A+++ Sbjct: 613 RHVLDSLKKKDLSQQALLAAVRR 635 >gi|325662084|ref|ZP_08150703.1| hypothetical protein HMPREF0490_01441 [Lachnospiraceae bacterium 4_1_37FAA] gi|325471747|gb|EGC74966.1| hypothetical protein HMPREF0490_01441 [Lachnospiraceae bacterium 4_1_37FAA] Length = 451 Score = 223 bits (568), Expect = 1e-56, Method: Composition-based stats. Identities = 75/203 (36%), Positives = 108/203 (53%), Gaps = 9/203 (4%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEV 61 QY + + + + E I A N+A+ + K Q+ANGA+Y D +HD K++ALE Sbjct: 254 AQYDEMREDYLLPYKEEAITAANAAALSGKLCQMANGAIYSDS-GEAVHIHDRKLEALED 312 Query: 62 IIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDK---DPCTIQEWNEGKIPLLFAHPAS 118 IIE A PI++ Y F DL R+ + Q + I++WNEGK + HPAS Sbjct: 313 IIEAAQG-PILLCYWFKHDLERITEKLEQLKVFYSRIVTEENIRKWNEGKYDVGLIHPAS 371 Query: 119 CGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDE 178 GHGLNLQ+ N +V+F L W LE +QQ R+ RQ + V V +++ TIDE Sbjct: 372 AGHGLNLQHSSNHIVWFGLTWSLELYQQTNARL----WRQGQKQDTVVVQHIVTAGTIDE 427 Query: 179 LVLQRLRTKSTIQDLLLNALKKE 201 +L L K Q L++A+K Sbjct: 428 DILDALTHKDASQTRLIDAVKAR 450 >gi|313123514|ref|YP_004033773.1| superfamily ii DNA/RNA helicase, snf2 family [Lactobacillus delbrueckii subsp. bulgaricus ND02] gi|312280077|gb|ADQ60796.1| Superfamily II DNA/RNA helicase, SNF2 family [Lactobacillus delbrueckii subsp. bulgaricus ND02] Length = 626 Score = 221 bits (564), Expect = 4e-56, Method: Composition-based stats. Identities = 75/203 (36%), Positives = 121/203 (59%), Gaps = 10/203 (4%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEV 61 K Y + +++ DL G+ + A N+A + QLA+GA+Y ++ +H++E+ EKI++ Sbjct: 427 KSYQQLKKDQVLDLPGQELSADNAAVLAGRLRQLASGAIYEEDGEHYQEIFAEKIESC-F 485 Query: 62 IIEKANAAPIIVAYHFNSDLARL----QKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPA 117 + A P +VAY+F SD +RL +K + D P I+ WN+GKIP++ PA Sbjct: 486 YLTSNTATPSLVAYYFKSDASRLLAFYRKNGVKAELFDGSPGMIRRWNKGKIPVMLVQPA 545 Query: 118 SCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 S G GLNLQ GG+ L++F+L W LE++QQM R+ + G K+ V +++L+ + TID Sbjct: 546 SAGAGLNLQEGGHTLIWFTLPWSLEQYQQMNGRL-----YRQGQKKPVIIHHLLTKGTID 600 Query: 178 ELVLQRLRTKSTIQDLLLNALKK 200 VL L+ K Q LL A+++ Sbjct: 601 RHVLDSLKKKDLSQQALLAAVRR 623 >gi|258646424|ref|ZP_05733893.1| SNF2 domain protein [Dialister invisus DSM 15470] gi|260403827|gb|EEW97374.1| SNF2 domain protein [Dialister invisus DSM 15470] Length = 459 Score = 221 bits (563), Expect = 5e-56, Method: Composition-based stats. Identities = 73/205 (35%), Positives = 118/205 (57%), Gaps = 10/205 (4%) Query: 2 KQYHKFQRELYCDLQGENI-EAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 + Y++ ++++ DL +++ + ++A+ + K QLANGAVY D+ W+E+H++KI+A Sbjct: 254 RDYNELEKKMVLDLGDDHVLDVTSAAALSNKLQQLANGAVYTDDGG-WQEIHNDKIEAFM 312 Query: 61 VIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDK---DPCTIQEWNEGKIPLLFAHPA 117 +IE+ N IV Y+F DL RL+ A + + +WN GK+ +L AHPA Sbjct: 313 ELIEQLNGKHAIVFYNFRHDLDRLRAALQKTNLHIRQLQTSADELDWNAGKVDILLAHPA 372 Query: 118 SCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 S +GLNLQ GGN +V+F L W LE +QQ +R+ + G K V V+ LI + T D Sbjct: 373 STAYGLNLQDGGNHVVWFGLNWSLELYQQANKRL-----HRQGQKNRVIVHQLICEGTRD 427 Query: 178 ELVLQRLRTKSTIQDLLLNALKKET 202 E + + L K Q ++++LK Sbjct: 428 EDLARALLMKDAAQQYVMDSLKARV 452 >gi|71276170|ref|ZP_00652450.1| SNF2-related [Xylella fastidiosa Dixon] gi|71898329|ref|ZP_00680502.1| SNF2-related [Xylella fastidiosa Ann-1] gi|170730598|ref|YP_001776031.1| hypothetical protein Xfasm12_1485 [Xylella fastidiosa M12] gi|71163088|gb|EAO12810.1| SNF2-related [Xylella fastidiosa Dixon] gi|71731852|gb|EAO33910.1| SNF2-related [Xylella fastidiosa Ann-1] gi|167965391|gb|ACA12401.1| conserved hypothetical protein [Xylella fastidiosa M12] Length = 470 Score = 220 bits (562), Expect = 6e-56, Method: Composition-based stats. Identities = 94/197 (47%), Positives = 130/197 (65%), Gaps = 13/197 (6%) Query: 2 KQYHKFQRELYCDLQ-GENIEAFNSASKTVKCLQLANGAVYYDEEKH-WKEVHDEKIKAL 59 + Y +++++ L+ G +EAFN+ SKT+KCLQLANGA+Y D+ + W+ VHD K++AL Sbjct: 257 RLYKAMEQDMFIALECGTEVEAFNATSKTIKCLQLANGALYTDDTRQAWEVVHDAKLEAL 316 Query: 60 EVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASC 119 IIE+A P++VAYHF SD+ARLQ+AFP+GR LDK+P TI++WN G IP+LFAHPAS Sbjct: 317 HDIIEEAAGMPVLVAYHFKSDVARLQRAFPKGRALDKNPDTIRDWNAGNIPVLFAHPASA 376 Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT----------RQRQAGFKRAVFVYY 169 GHGLNLQ GGNIL FF WW + ++ V R+R A R V Y Sbjct: 377 GHGLNLQDGGNILAFFGHWWAQVRNGVLMRTCTVCGGSGTVPISDRKRAAALGRDVSTYC 436 Query: 170 LIAQNTIDELVLQRLRT 186 + + + E +L++LR Sbjct: 437 MRWRG-LYEWLLEKLRA 452 >gi|227872572|ref|ZP_03990908.1| helicase [Oribacterium sinus F0268] gi|227841573|gb|EEJ51867.1| helicase [Oribacterium sinus F0268] Length = 449 Score = 218 bits (556), Expect = 3e-55, Method: Composition-based stats. Identities = 67/204 (32%), Positives = 111/204 (54%), Gaps = 9/204 (4%) Query: 1 MKQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 +K Y + ++ + L+ I A ++ T K Q ANGA+Y DE+K +HD K++ Sbjct: 248 LKAYQELEKNMVLSLEESEITAVSAGVLTNKLSQCANGAIY-DEDKVVNHIHDCKLERFT 306 Query: 61 VIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD---PCTIQEWNEGKIPLLFAHPA 117 ++E+ N +V Y+F D R+ KA + ++ P ++WN+GKI +L AHPA Sbjct: 307 ELVEELNGESALVFYNFKHDKDRILKALEKSGLEVREFKSPKDEEDWNKGKIDILLAHPA 366 Query: 118 SCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 S +G+NLQYGG +++FSL W E + Q R+ + G ++ V V+ L+ +T+D Sbjct: 367 STAYGINLQYGGRNIIWFSLPWSYELYAQANARLF-----RQGQEKPVIVHELLCTDTVD 421 Query: 178 ELVLQRLRTKSTIQDLLLNALKKE 201 + + L K Q+ +L ALK Sbjct: 422 HDIKKSLSEKGQNQEDVLRALKAR 445 >gi|307317157|ref|ZP_07596598.1| DEAD-like helicase [Sinorhizobium meliloti AK83] gi|306897245|gb|EFN27990.1| DEAD-like helicase [Sinorhizobium meliloti AK83] Length = 522 Score = 217 bits (553), Expect = 7e-55, Method: Composition-based stats. Identities = 79/206 (38%), Positives = 123/206 (59%), Gaps = 14/206 (6%) Query: 1 MKQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVY------YDEEKHWKEVHDE 54 MK+Y +F++ L ++EA + T K LQ ANG +Y ++ ++ +HD Sbjct: 319 MKEYREFEKTLVAQ--NYDVEAVSRGVLTGKLLQFANGGLYRLDEDVFNAKRETIAIHDY 376 Query: 55 KIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFA 114 K+KALE I+E+A ++VAY F D R++K FP+ D++P +++WN GKI + A Sbjct: 377 KLKALESIVEEAAGQNVLVAYSFQFDKDRIRKKFPKAVFFDEEPNFVKKWNAGKIQMGVA 436 Query: 115 HPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFK-RAVFVYYLIAQ 173 HPAS GHGLNLQ+GG+I V+F L W LE Q R+ + G K +VF++ +IA+ Sbjct: 437 HPASIGHGLNLQHGGHIQVWFGLTWSLELWDQFNRRLA-----RPGQKNHSVFIHVIIAK 491 Query: 174 NTIDELVLQRLRTKSTIQDLLLNALK 199 T+DE + L+ K QD ++NA++ Sbjct: 492 GTMDEAQYETLQIKGVTQDQIMNAVR 517 >gi|282911093|ref|ZP_06318895.1| SNF2 family protein [Staphylococcus aureus subsp. aureus WBG10049] gi|282324788|gb|EFB55098.1| SNF2 family protein [Staphylococcus aureus subsp. aureus WBG10049] Length = 455 Score = 216 bits (551), Expect = 1e-54, Method: Composition-based stats. Identities = 79/204 (38%), Positives = 118/204 (57%), Gaps = 8/204 (3%) Query: 2 KQYHKFQRELYCDLQGE-NIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 K Y + ++ + + E + A N AS + K LQL+NGAVY D+E + +HD+K+ LE Sbjct: 257 KVYEELEKNYILESEEEGTVVAQNGASLSQKLLQLSNGAVYTDDED-VRLIHDKKLDKLE 315 Query: 61 VIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCG 120 IIE++ PI++ Y+F D R+ + F + TL+ D + WN G I LL AHPAS G Sbjct: 316 EIIEESQGQPILLFYNFKHDKERILQRFKEATTLE-DSNYKERWNSGDIKLLIAHPASAG 374 Query: 121 HGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELV 180 HGLNLQ GG+I+V+F L W LE +QQ R+ + G ++++I NTID+ V Sbjct: 375 HGLNLQQGGHIIVWFGLTWSLELYQQANARL-----YRQGQNHTTIIHHIITDNTIDQRV 429 Query: 181 LQRLRTKSTIQDLLLNALKKETIH 204 + L+ K Q+ L+ A+K Sbjct: 430 YKALQNKELTQEELMKAIKARIAK 453 >gi|312438077|gb|ADQ77148.1| SNF2 domain protein [Staphylococcus aureus subsp. aureus TCH60] Length = 455 Score = 216 bits (551), Expect = 1e-54, Method: Composition-based stats. Identities = 79/204 (38%), Positives = 118/204 (57%), Gaps = 8/204 (3%) Query: 2 KQYHKFQRELYCDLQGE-NIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 K Y + ++ + + E + A N AS + K LQL+NGAVY D+E + +HD+K+ LE Sbjct: 257 KVYEELEKNYILESEEEGTVVAQNGASLSQKLLQLSNGAVYTDDED-VRLIHDKKLDKLE 315 Query: 61 VIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCG 120 IIE++ PI++ Y+F D R+ + F + TL+ D + WN G I LL AHPAS G Sbjct: 316 EIIEESQGQPILLFYNFKHDKERILQRFKEATTLE-DSNYKERWNSGDIKLLIAHPASAG 374 Query: 121 HGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELV 180 HGLNLQ GG+I+V+F L W LE +QQ R+ + G ++++I NTID+ V Sbjct: 375 HGLNLQQGGHIIVWFGLTWSLELYQQANARL-----YRQGQNHTTIIHHIITDNTIDQRV 429 Query: 181 LQRLRTKSTIQDLLLNALKKETIH 204 + L+ K Q+ L+ A+K Sbjct: 430 YKALQNKELTQEELMKAIKARIAK 453 >gi|283469596|emb|CAQ48807.1| SNF2 family N-domain protein [Staphylococcus aureus subsp. aureus ST398] Length = 452 Score = 213 bits (542), Expect = 1e-53, Method: Composition-based stats. Identities = 78/204 (38%), Positives = 118/204 (57%), Gaps = 8/204 (3%) Query: 2 KQYHKFQRELYCDLQGE-NIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 K Y + ++ + + E + A N AS + K LQL+NGAVY D +E+HD+K++ LE Sbjct: 254 KVYEELEKNYILESEEEGTVVAQNGASLSQKLLQLSNGAVYTD-NGDVREIHDKKLEKLE 312 Query: 61 VIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCG 120 IIE++ PI++ Y+F D R+ + F + TL+ D + WN G I LL AHPAS G Sbjct: 313 EIIEESQGQPILLFYNFKHDKERILQRFKEATTLE-DSNYKERWNSGDIKLLIAHPASAG 371 Query: 121 HGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELV 180 HGLNLQ GG+I+V+F L W LE +QQ R+ + G +++++ NTID+ V Sbjct: 372 HGLNLQQGGHIIVWFGLTWSLELYQQANARL-----YRQGQNHTTIIHHIMTDNTIDQRV 426 Query: 181 LQRLRTKSTIQDLLLNALKKETIH 204 + L+ K Q+ L+ A+K Sbjct: 427 YKALQNKELTQEELMKAIKARIAK 450 >gi|156603990|ref|YP_001429936.1| hypothetical protein SPTP3102_gp41 [Staphylococcus phage tp310-2] gi|154818076|gb|ABS87503.1| hypothetical protein [Staphylococcus phage tp310-2] Length = 455 Score = 213 bits (542), Expect = 1e-53, Method: Composition-based stats. Identities = 78/202 (38%), Positives = 119/202 (58%), Gaps = 8/202 (3%) Query: 2 KQYHKFQRELYCDLQGE-NIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 K Y + ++ + + E + A N AS + K LQL+NGAVY D+ +E+HD+K++ LE Sbjct: 257 KLYDELEKHYILESEEEGTVVAQNGASLSQKLLQLSNGAVYTDDGD-VREIHDKKLEKLE 315 Query: 61 VIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCG 120 IIE++ PI++ Y+F D R+ + F + TL+ D + WN G I LL AHPAS G Sbjct: 316 EIIEESQGQPILLFYNFKHDKERILERFKEATTLE-DSNYKERWNSGNIKLLIAHPASAG 374 Query: 121 HGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELV 180 HGLNLQ GG+I+V+F L W LE +QQ R+ + G +++++ NTID+ V Sbjct: 375 HGLNLQQGGHIIVWFGLTWSLELYQQANARL-----YRQGQNHTTIIHHIMTDNTIDQRV 429 Query: 181 LQRLRTKSTIQDLLLNALKKET 202 + L+ K Q+ L+ A+K Sbjct: 430 YEALQNKELTQEELMKAIKARI 451 >gi|15838886|ref|NP_299574.1| hypothetical protein XF2295 [Xylella fastidiosa 9a5c] gi|9107459|gb|AAF85094.1|AE004041_6 phage-related protein [Xylella fastidiosa 9a5c] Length = 470 Score = 213 bits (542), Expect = 1e-53, Method: Composition-based stats. Identities = 92/193 (47%), Positives = 125/193 (64%), Gaps = 13/193 (6%) Query: 2 KQYHKFQRELYCDLQ-GENIEAFNSASKTVKCLQLANGAVYYDEEKH-WKEVHDEKIKAL 59 + Y ++E++ L+ G +EAFN+ASKT+KCLQLANGA+Y D+ + W+ VHD K++AL Sbjct: 257 RLYKAMEQEMFIALECGAEVEAFNAASKTIKCLQLANGALYTDDTRQAWEVVHDAKLEAL 316 Query: 60 EVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASC 119 IIE+A P++VAYHF SD+ARLQ+AFP+GR LD+ P T+++WN G IP+LFAHPAS Sbjct: 317 HEIIEEAAGMPVLVAYHFKSDVARLQRAFPKGRVLDQHPDTLRDWNAGNIPVLFAHPASA 376 Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT----------RQRQAGFKRAVFVYY 169 GHGLNLQ GGNIL FF WW + ++ V R+R A R V Y Sbjct: 377 GHGLNLQDGGNILAFFGHWWAQVRNGVLMRTCTVCGGSGTVPISERKRAAALGRDVSTYC 436 Query: 170 LIAQNTIDELVLQ 182 + + E +L Sbjct: 437 KKWRG-VYEWLLD 448 >gi|268610658|ref|ZP_06144385.1| SNF2 domain-containing protein [Ruminococcus flavefaciens FD-1] Length = 417 Score = 212 bits (541), Expect = 2e-53, Method: Composition-based stats. Identities = 60/174 (34%), Positives = 96/174 (55%), Gaps = 7/174 (4%) Query: 1 MKQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 +K Y K ++E L +++ A N+A K +QLA+G VY D+ +H+ K+ ALE Sbjct: 249 IKAYRKLEKEYTLPLLHDDVSAANAAVLCGKLVQLASGCVY-DDGGTPSIIHNRKLDALE 307 Query: 61 VIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCG 120 ++E N P++VAY + + R++ F K I +WN+GKIP+ P+S G Sbjct: 308 DLLEAQNGKPVLVAYWYQHERERIKARFDVREI--KTDQDIADWNDGKIPVALIQPSSAG 365 Query: 121 HGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQN 174 HGLNLQ GG+ +++F++ W LE +QQ R+ RQ V +++L A Sbjct: 366 HGLNLQDGGSTIIWFTMPWSLELYQQTNARL----WRQGQNADTVVIHHLTAAG 415 >gi|66395514|ref|YP_239930.1| ORF006 [Staphylococcus phage 42E] gi|215401142|ref|YP_002332397.1| putative helicase [Staphylococcus phage phiSauS-IPLA35] gi|62636007|gb|AAX91118.1| ORF006 [Staphylococcus phage 42E] gi|215260493|gb|ACJ64623.1| gp34 [Staphylococcus phage phiSauS-IPLA35] Length = 455 Score = 212 bits (539), Expect = 3e-53, Method: Composition-based stats. Identities = 77/204 (37%), Positives = 118/204 (57%), Gaps = 8/204 (3%) Query: 2 KQYHKFQRELYCDLQGE-NIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 K Y + ++ + + + + A N AS + K LQL+NGAVY D +E+HD+K++ LE Sbjct: 257 KLYDELEKHYILESEEDGTVVAQNGASLSQKLLQLSNGAVYTD-NGDVREIHDKKLEKLE 315 Query: 61 VIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCG 120 IIE++ PI++ Y+F D R+ + F + TL+ D + WN G I LL AHPAS G Sbjct: 316 EIIEESQGQPILLFYNFKHDKERILQRFKEATTLE-DSNYKERWNSGDIKLLIAHPASAG 374 Query: 121 HGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELV 180 HGLNLQ GG+I+V+F L W LE +QQ R+ + G +++++ NTID+ V Sbjct: 375 HGLNLQQGGHIIVWFGLTWSLELYQQANARL-----YRQGQNHTTIMHHIMTDNTIDQRV 429 Query: 181 LQRLRTKSTIQDLLLNALKKETIH 204 + L+ K Q+ L+ A+K Sbjct: 430 YKALQNKELTQEELMKAIKARIAK 453 >gi|323438429|gb|EGA96184.1| phage helicase [Staphylococcus aureus O11] Length = 452 Score = 208 bits (530), Expect = 4e-52, Method: Composition-based stats. Identities = 77/204 (37%), Positives = 117/204 (57%), Gaps = 8/204 (3%) Query: 2 KQYHKFQRELYCDLQGE-NIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 K Y + ++ + + + + A N AS + K LQL+NGAVY D+ + +HD+K++ LE Sbjct: 254 KLYDELEKHYILESEEDGTVVAQNGASLSQKLLQLSNGAVYTDDGD-VRGIHDKKLEKLE 312 Query: 61 VIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCG 120 IIE++ PI++ Y+F D R+ + F + TL+ D + WN G I LL AHPAS G Sbjct: 313 EIIEESQGQPILLFYNFKHDKERILERFKEATTLE-DSNYKERWNSGDIKLLIAHPASAG 371 Query: 121 HGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELV 180 HGLNLQ GG+I+V F L W LE +QQ R+ + G +++L+ NTID+ V Sbjct: 372 HGLNLQQGGHIIVSFGLTWSLELYQQANARL-----YRQGQNHTTIIHHLMTDNTIDQRV 426 Query: 181 LQRLRTKSTIQDLLLNALKKETIH 204 + L+ K Q+ L+ A+K Sbjct: 427 YKALQNKELTQEELMKAIKARIAK 450 >gi|91214213|ref|NP_919000.2| helicase [Burkholderia phage BcepNazgul] gi|88604906|gb|AAQ63367.2| helicase [Burkholderia phage BcepNazgul] Length = 522 Score = 206 bits (525), Expect = 1e-51, Method: Composition-based stats. Identities = 79/200 (39%), Positives = 117/200 (58%), Gaps = 7/200 (3%) Query: 2 KQYHKFQRELYCDL-QGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 Y KF+R+ DL G IEA +A+ K LQLA+G VY D EK VHD KI+ L Sbjct: 307 AMYKKFERDFILDLPDGTEIEAETAAALNQKLLQLASGCVY-DAEKKTHWVHDHKIEDLT 365 Query: 61 VIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCG 120 ++E+ N P++VAY F S L RL+KAFP+ R +D + + +WN+GKI +L HPAS Sbjct: 366 QLVEELNGEPLLVAYWFKSSLERLKKAFPRARVMDAEGKLVGDWNKGKIKILLVHPASVA 425 Query: 121 HGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELV 180 HGLN+Q GG+ L + +++ LE + Q+I R+ + G + V V++ T+D++ Sbjct: 426 HGLNMQKGGHHLYIYDIFYSLELYLQLIGRLA-----RQGQRHVVRVHHATMIGTVDDVA 480 Query: 181 LQRLRTKSTIQDLLLNALKK 200 + L K QD L L++ Sbjct: 481 VSSLTRKRNAQDDLFVRLRR 500 >gi|213692059|ref|YP_002322645.1| SNF2-related protein [Bifidobacterium longum subsp. infantis ATCC 15697] gi|213523520|gb|ACJ52267.1| SNF2-related protein [Bifidobacterium longum subsp. infantis ATCC 15697] Length = 464 Score = 205 bits (522), Expect = 3e-51, Method: Composition-based stats. Identities = 67/206 (32%), Positives = 113/206 (54%), Gaps = 11/206 (5%) Query: 4 YHKFQRELYCDLQ-GENIEAFNSASKTVKCLQLANGAVY---YDEEKHWKEVHDEKIKAL 59 Y + +R++ DL G + A N+ T K QL G +Y D E + V D K+ AL Sbjct: 264 YDRLRRQMVADLDDGTTVTAANAGVLTAKLAQLTCGCLYPDADDPEGTIRHVDDVKLDAL 323 Query: 60 EVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASC 119 II A+ P++V Y F +L R++ FP R + + ++EW G++PLL AHP + Sbjct: 324 ADIIGAADG-PVLVFYQFTDELERMRARFPGMREVHEQG-VLEEWRNGRVPLLAAHPQAA 381 Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 +GLN+Q GG+ +V+ SL W ++++Q +R+ + G KR V V+ L+ NT+D Sbjct: 382 KYGLNIQDGGHEIVWTSLPWSFDDYRQACDRL-----HRQGQKRTVRVHRLLESNTVDRR 436 Query: 180 VLQRLRTKSTIQDLLLNALKKETIHV 205 L L + + + +++A++ ET + Sbjct: 437 KLDVLTGRMMLHEAVMDAVEGETTGI 462 >gi|320458171|dbj|BAJ68792.1| hypothetical phage protein [Bifidobacterium longum subsp. infantis ATCC 15697] Length = 460 Score = 205 bits (521), Expect = 4e-51, Method: Composition-based stats. Identities = 67/206 (32%), Positives = 113/206 (54%), Gaps = 11/206 (5%) Query: 4 YHKFQRELYCDLQ-GENIEAFNSASKTVKCLQLANGAVY---YDEEKHWKEVHDEKIKAL 59 Y + +R++ DL G + A N+ T K QL G +Y D E + V D K+ AL Sbjct: 260 YDRLRRQMVADLDDGTTVTAANAGVLTAKLAQLTCGCLYPDADDPEGTIRHVDDVKLDAL 319 Query: 60 EVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASC 119 II A+ P++V Y F +L R++ FP R + + ++EW G++PLL AHP + Sbjct: 320 ADIIGAADG-PVLVFYQFTDELERMRARFPGMREVHEQG-VLEEWRNGRVPLLAAHPQAA 377 Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 +GLN+Q GG+ +V+ SL W ++++Q +R+ + G KR V V+ L+ NT+D Sbjct: 378 KYGLNIQDGGHEIVWTSLPWSFDDYRQACDRL-----HRQGQKRTVRVHRLLESNTVDRR 432 Query: 180 VLQRLRTKSTIQDLLLNALKKETIHV 205 L L + + + +++A++ ET + Sbjct: 433 KLDVLTGRMMLHEAVMDAVEGETTGI 458 >gi|322691254|ref|YP_004220824.1| phage protein [Bifidobacterium longum subsp. longum JCM 1217] gi|320456110|dbj|BAJ66732.1| hypothetical phage protein [Bifidobacterium longum subsp. longum JCM 1217] Length = 460 Score = 204 bits (520), Expect = 5e-51, Method: Composition-based stats. Identities = 68/206 (33%), Positives = 112/206 (54%), Gaps = 11/206 (5%) Query: 4 YHKFQRELYCDLQ-GENIEAFNSASKTVKCLQLANGAVY---YDEEKHWKEVHDEKIKAL 59 Y + +R++ DL G + N+ T K QL G +Y D E + V D K+ AL Sbjct: 260 YDRLRRQMVADLDDGTTVTVANAGVLTAKLAQLTCGCLYPDADDPEGTIRHVDDVKLDAL 319 Query: 60 EVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASC 119 II A+ P++V Y F +L R++ FP R + + ++EW G++PLL AHP + Sbjct: 320 ADIISAADG-PVLVFYQFTDELERMRARFPGMREVHEQG-VLEEWRNGRVPLLAAHPQAA 377 Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 +GLN+Q GG+ +V+ SL W ++++Q +R+ + G KR V V+ L+ NT+D Sbjct: 378 KYGLNIQDGGHEIVWTSLPWSFDDYRQACDRL-----HRQGQKRTVRVHRLLESNTVDRR 432 Query: 180 VLQRLRTKSTIQDLLLNALKKETIHV 205 L L + + + +++AL+ ET V Sbjct: 433 KLDVLTGRMMLHEAVMDALEGETAGV 458 >gi|322382458|ref|ZP_08056353.1| ATP-binding SNF2 helicase-like protein/protein kinase-like protein [Paenibacillus larvae subsp. larvae B-3650] gi|321153571|gb|EFX45960.1| ATP-binding SNF2 helicase-like protein/protein kinase-like protein [Paenibacillus larvae subsp. larvae B-3650] Length = 463 Score = 200 bits (508), Expect = 1e-49, Method: Composition-based stats. Identities = 73/182 (40%), Positives = 106/182 (58%), Gaps = 10/182 (5%) Query: 28 KTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKA 87 + K LQ+A+GAVY DEE+ KE+H+ K+ ALE I+E + P++V Y++ L R+Q+ Sbjct: 280 LSNKLLQMASGAVY-DEERGVKEIHEAKLDALEDILEASQGKPVMVFYNYKHSLQRVQQR 338 Query: 88 FPQGRTLDKDP---CTIQEWNEGKIPLLFAHPASCGHGLNLQYGGN-ILVFFSLWWDLEE 143 FPQ R L K I +WN KIPLL HP S GHGLNLQ +++F W LEE Sbjct: 339 FPQARILRKGKEGVQDITDWNTNKIPLLLLHPKSAGHGLNLQESNCQTVIWFDQIWSLEE 398 Query: 144 HQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETI 203 QQ R+ + G R + V L+A+ T+DE V++ + K+T Q+ L+ A+K Sbjct: 399 FQQANARV-----YRQGQTRKIVVMQLVAEGTMDEEVVEAIDKKATGQEELMQAVKARIE 453 Query: 204 HV 205 + Sbjct: 454 RI 455 >gi|309702946|emb|CBJ02277.1| putative phage protein [Escherichia coli ETEC H10407] Length = 134 Score = 199 bits (507), Expect = 2e-49, Method: Composition-based stats. Identities = 85/133 (63%), Positives = 112/133 (84%) Query: 71 IIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGN 130 ++VAYH+ DL RL KAFP+GR LD+DP T+++WN GKIP+LFAHPAS GHGLN+Q GGN Sbjct: 1 MLVAYHWKHDLERLLKAFPRGRHLDQDPQTLRDWNSGKIPVLFAHPASAGHGLNMQDGGN 60 Query: 131 ILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 ILVFFS WWDLE++QQ+IERIG TRQ QAG R VF++++IA +T+DE+V++R +K T+ Sbjct: 61 ILVFFSHWWDLEQYQQIIERIGPTRQIQAGHNRPVFIHHIIAADTMDEMVMERRNSKRTV 120 Query: 191 QDLLLNALKKETI 203 QD+LL+A+KK I Sbjct: 121 QDILLDAMKKRGI 133 >gi|255994014|ref|ZP_05427149.1| SNF2 domain protein [Eubacterium saphenum ATCC 49989] gi|255993682|gb|EEU03771.1| SNF2 domain protein [Eubacterium saphenum ATCC 49989] Length = 467 Score = 199 bits (507), Expect = 2e-49, Method: Composition-based stats. Identities = 73/205 (35%), Positives = 112/205 (54%), Gaps = 14/205 (6%) Query: 2 KQYHKFQRELYCDLQGEN-----IEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKI 56 + Y KF+R + + A +A + K LQLA GA+Y ++ K + VHD K+ Sbjct: 260 RAYAKFERGCVLRYLDDTDSASSVMASTAADLSGKLLQLAGGAIYQEDSKDYVTVHDTKL 319 Query: 57 KALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGR---TLDKDPCTIQEWNEGKIPLLF 113 KAL ++E N II+ Y+F + ARL AF + + K I +WN GK+ +L Sbjct: 320 KALTELVEPLNE-NIIIFYNFLHEKARLCNAFSDFKGEVRVFKSGKDIADWNAGKVNILI 378 Query: 114 AHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQ 173 AHPA+ G+GLNLQ GG +++F L E++ Q +R+ + G + VFV+ L+ + Sbjct: 379 AHPAAMGYGLNLQQGGRRIIWFGLPQSYEQYAQANKRL-----HRQGQQDKVFVHRLVCK 433 Query: 174 NTIDELVLQRLRTKSTIQDLLLNAL 198 T DE VL L K ++Q LL++L Sbjct: 434 GTRDEDVLSALAHKDSMQKYLLSSL 458 >gi|238898768|ref|YP_002924450.1| phage DNA helicase, partial [Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum)] gi|229466528|gb|ACQ68302.1| phage DNA helicase, partial [Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum)] Length = 157 Score = 181 bits (460), Expect = 5e-44, Method: Composition-based stats. Identities = 66/144 (45%), Positives = 92/144 (63%), Gaps = 5/144 (3%) Query: 59 LEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPAS 118 +E +I++A P++VAY++ SDLA ++ FP+ + TI WN GKIPLL AHPAS Sbjct: 1 MEEMIQEAAGQPVLVAYNYQSDLALIKVRFPKAELIGHAADTIDRWNTGKIPLLLAHPAS 60 Query: 119 CGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDE 178 GHGLNLQ GGNI+V+F L W LE +QQ R+ + G R VF+++L+ ++ID Sbjct: 61 AGHGLNLQSGGNIIVWFGLNWSLELYQQFNARL-----HRQGQTRPVFIHHLVMNDSIDL 115 Query: 179 LVLQRLRTKSTIQDLLLNALKKET 202 VL+ L K Q LL+ALKK+ Sbjct: 116 TVLEALENKHITQKALLDALKKDI 139 >gi|325270384|ref|ZP_08136989.1| helicase [Prevotella multiformis DSM 16608] gi|324987328|gb|EGC19306.1| helicase [Prevotella multiformis DSM 16608] Length = 1326 Score = 181 bits (459), Expect = 7e-44, Method: Composition-based stats. Identities = 52/209 (24%), Positives = 91/209 (43%), Gaps = 21/209 (10%) Query: 1 MKQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 M Y +RE ++ + ++ ++ + Q+A D + WK + K+ A Sbjct: 1107 MAMYEVRRRETEEKVRANAADKVSTLAEITRLRQMACSCSLVD--RKWK-LPSSKVLAFI 1163 Query: 61 VIIEKAN--AAPIIVAYHFNSDLARLQKAFPQGRT----------LDKDPCTIQEWNEGK 108 + E N +V F S L +++A + R + + +Q++ G+ Sbjct: 1164 DLAESLNDSGNRALVFSQFTSFLDEVRRAMDKARLPYLYLDGSTPMAQREKLVQDFQTGR 1223 Query: 109 IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVY 168 P + G GLNL G N ++ WW+ QQ +R + G K+ V VY Sbjct: 1224 CPFFLISLKAGGLGLNLT-GANYVIHLDPWWNPAIEQQATDR-----AYRIGQKQEVTVY 1277 Query: 169 YLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 +LI+Q+TI+E +L+ RTK + D LL Sbjct: 1278 HLISQHTIEEKILRLHRTKRNLSDSLLEG 1306 >gi|125974159|ref|YP_001038069.1| SNF2-related protein [Clostridium thermocellum ATCC 27405] gi|125714384|gb|ABN52876.1| SNF2-related protein [Clostridium thermocellum ATCC 27405] Length = 452 Score = 180 bits (456), Expect = 1e-43, Method: Composition-based stats. Identities = 49/211 (23%), Positives = 96/211 (45%), Gaps = 17/211 (8%) Query: 1 MKQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 +K+Y + ++ Y +L + A N ++ ++ QL G + D+ ++V D K+KALE Sbjct: 233 LKKYKELVKQSYTELSAGEVTATNILTRLLRLSQLTGGFIGSDDGGKIEQVSDAKLKALE 292 Query: 61 VIIEKA--NAAPIIVAYHFNSDLARLQKAFPQ---------GRTLDKDPCTIQEWNEGKI 109 I+E + ++V F ++ + + + G T D+ + + Sbjct: 293 DILESSIQEGHKLVVIARFIPEIHAICRLLEKKNIGYACIYGATKDRQEQVNRFQYDPDC 352 Query: 110 PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYY 169 + A+ G G+ L + +VF+SL + + +Q RI + G K Y Sbjct: 353 MVFVGQIATAGLGITLT-AASTMVFYSLDYSMSNFEQTKARI-----HRVGQKNGCTYIY 406 Query: 170 LIAQNTIDELVLQRLRTKSTIQDLLLNALKK 200 LIA+ T+D +L LR K+ + +L++ +K Sbjct: 407 LIAKGTVDSKILTALRNKADLAKMLIDDYRK 437 >gi|315926199|ref|ZP_07922399.1| snf2 family helicase [Pseudoramibacter alactolyticus ATCC 23263] gi|315620643|gb|EFV00624.1| snf2 family helicase [Pseudoramibacter alactolyticus ATCC 23263] Length = 478 Score = 180 bits (456), Expect = 1e-43, Method: Composition-based stats. Identities = 47/211 (22%), Positives = 96/211 (45%), Gaps = 17/211 (8%) Query: 1 MKQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 +K Y+ + + +L+ + + N +K ++ QL G + DE ++V K+ LE Sbjct: 268 LKLYYSLVEDSFAELEEDEVTTTNILTKLLRLSQLTGGFISGDESDVPEQVSTAKLSVLE 327 Query: 61 VIIEKA--NAAPIIVAYHFNSDLARLQKAFPQ---------GRTLDKDPCTIQEWNEGKI 109 II+ A +++ F +L + + G +++ Q N+ + Sbjct: 328 DIIDSAADEGRKLVIIARFVPELHAICSLLDKKGINHSLIMGGVKNREEQISQFQNDPDV 387 Query: 110 PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYY 169 + A+ G G+ L + +VF+SL + + ++Q RI +AG K + Sbjct: 388 TVFVGQIATAGLGITLT-ASSTMVFYSLDYSMSTYEQTKARI-----HRAGQKYPCTYIH 441 Query: 170 LIAQNTIDELVLQRLRTKSTIQDLLLNALKK 200 LIA T+D+ VL+ LR+K+ + L++ ++ Sbjct: 442 LIADGTVDQKVLRALRSKANLAKTLVDDYRR 472 >gi|269975285|gb|ACZ55509.1| helicase [Staphylococcus phage SA1] Length = 491 Score = 178 bits (452), Expect = 3e-43, Method: Composition-based stats. Identities = 73/230 (31%), Positives = 111/230 (48%), Gaps = 37/230 (16%) Query: 3 QYHKFQRELYCDLQGEN----------IEAFNSASKTVKCLQLANGAVY-------YDEE 45 +Y + E ++ E+ IEA +AS K LQ+ +G +Y +++ Sbjct: 246 RYRMMEEESLVEIMPEDFDEHLDDPIVIEAEQAASLQSKLLQMCSGFIYDTKIVGITEDD 305 Query: 46 KHWKE-----VHDEKIKALEVIIEK-ANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPC 99 K K+ +HD K ALE ++E +++AYHF L RL++ F +D D Sbjct: 306 KVIKQKDTYRLHDLKFDALEELLETTLADKNVLIAYHFKPTLERLKERFKDLVVMDDDGK 365 Query: 100 TIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQA 159 I++WN GKI LL AHP S GHGLNLQ+GG+++V+ W LE Q R+ + Sbjct: 366 CIKKWNAGKIRLLAAHPQSAGHGLNLQHGGHVIVYIDNPWSLERFLQFNGRL-----HRQ 420 Query: 160 GFKRAVFVYYLIA---------QNTIDELVLQRLRTKSTIQDLLLNALKK 200 G K V +Y A T D++V+Q L K +QD L++ Sbjct: 421 GQKFPVTIYQFKAMLRTPNGLLAETADDVVIQALVEKEDVQDAFFALLER 470 >gi|288802766|ref|ZP_06408204.1| SNF2/helicase domain protein [Prevotella melaninogenica D18] gi|288334916|gb|EFC73353.1| SNF2/helicase domain protein [Prevotella melaninogenica D18] Length = 1343 Score = 178 bits (451), Expect = 5e-43, Method: Composition-based stats. Identities = 52/209 (24%), Positives = 85/209 (40%), Gaps = 21/209 (10%) Query: 1 MKQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 M Y +RE + + ++ ++ Q+A D K WK + K+ A Sbjct: 1124 MAMYEVKRRETEAKILENKADKVSTLAEITHLRQMACSCSLVD--KRWK-LPSSKVLAFI 1180 Query: 61 VIIEKAN--AAPIIVAYHFNSDLARLQKAFPQGRT----------LDKDPCTIQEWNEGK 108 + E N +V F S ++KA + + ++E+ GK Sbjct: 1181 DLAESLNDSGNRALVFSQFTSFFEEIKKAMETAKLPYLYLDGSTPMSMREKLVKEFQSGK 1240 Query: 109 IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVY 168 P + G GLNL G N ++ WW+ QQ +R + G K+ V VY Sbjct: 1241 CPFFLISLKAGGLGLNLT-GANYVIHLDPWWNPAIEQQATDR-----AYRIGQKQDVTVY 1294 Query: 169 YLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 LI+Q+TI+E +L+ +TK + D LL Sbjct: 1295 RLISQHTIEEKILRLHKTKRNLSDSLLEG 1323 >gi|223986447|ref|ZP_03636451.1| hypothetical protein HOLDEFILI_03763 [Holdemania filiformis DSM 12042] gi|223961599|gb|EEF66107.1| hypothetical protein HOLDEFILI_03763 [Holdemania filiformis DSM 12042] Length = 471 Score = 177 bits (450), Expect = 6e-43, Method: Composition-based stats. Identities = 48/210 (22%), Positives = 95/210 (45%), Gaps = 17/210 (8%) Query: 1 MKQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 MK Y E + +L + A N ++ ++ QL G + D+ ++V + K+ LE Sbjct: 261 MKLYKNLVDESFAELSDGEVTATNVLTRLLRLNQLTGGFICSDDSSKAEQVSNAKMSVLE 320 Query: 61 VIIEKA--NAAPIIVAYHFNSDLARLQKAFPQ---------GRTLDKDPCTIQEWNEGKI 109 I++ + +++ F +L + K + G ++D Q N+ ++ Sbjct: 321 DIVDASLQEGKKLVIIARFIPELHAICKMLGKKGIRHSLIMGGVNNRDEQVAQFQNDPEV 380 Query: 110 PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYY 169 + A+ G G+ L + +VF+SL + + +Q RI +AG K Y Sbjct: 381 SVFVGQIATAGMGITLT-AASTMVFYSLDYSMSNFEQTKARI-----HRAGQKFPCTYLY 434 Query: 170 LIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 L A+ TID VL+ L++K+++ L++ + Sbjct: 435 LTAEGTIDTKVLKALKSKASLAKTLVDDYR 464 >gi|302345308|ref|YP_003813661.1| SNF2 family N-terminal domain protein [Prevotella melaninogenica ATCC 25845] gi|302150135|gb|ADK96397.1| SNF2 family N-terminal domain protein [Prevotella melaninogenica ATCC 25845] Length = 1343 Score = 177 bits (448), Expect = 1e-42, Method: Composition-based stats. Identities = 52/209 (24%), Positives = 88/209 (42%), Gaps = 21/209 (10%) Query: 1 MKQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 M Y +RE + + ++ ++ Q+A D K WK + K+ A Sbjct: 1124 MAMYEVKRRETEAKILENKADKVSTLAELTHLRQMACSCSLVD--KKWK-LPSSKVLAFI 1180 Query: 61 VIIEKANAA--PIIVAYHFNSDLARLQKAFPQGRT----------LDKDPCTIQEWNEGK 108 + E N + +V F S ++KA + + + ++E+ GK Sbjct: 1181 DLAESLNDSDNRALVFSQFTSFFEEVRKAMDKAKLPYLYLDGSTSMAMREKLVKEFQTGK 1240 Query: 109 IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVY 168 P + G GLNL G N +V WW+ QQ +R + G ++ V VY Sbjct: 1241 CPFFLISLKAGGLGLNLT-GANYVVHLDPWWNPAIEQQATDR-----AYRIGQQQDVTVY 1294 Query: 169 YLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 +LI+Q+TI+E +L+ +TK + D LL Sbjct: 1295 HLISQHTIEEKILRLHKTKRNLSDSLLEG 1323 >gi|301321598|gb|ADK68988.1| Superfamily II DNA/RNA helicase, SNF2 family [Gordonia sp. KTR9] Length = 735 Score = 170 bits (432), Expect = 9e-41, Method: Composition-based stats. Identities = 63/211 (29%), Positives = 100/211 (47%), Gaps = 28/211 (13%) Query: 14 DLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWK--------------EVHDEKIKAL 59 D IEA N K LQ A GAVY D +K ++H K + Sbjct: 512 DASAHYIEAVNGGVLRNKLLQFAAGAVYIDLDKGADGYAKATSLTSRPTLQLHSAKFDKV 571 Query: 60 EVIIEK----ANAAPIIVAYHFNSD----LARLQKA-FPQGRTLDKDPCTIQEWNEGKIP 110 I ++ +++AY F+ + + RL++A + R + P T + WN G+IP Sbjct: 572 IDICDQHFATGGDGSVLIAYRFDFEKTILIDRLRRAGYLGARAYNGMPDTKKAWNRGEIP 631 Query: 111 LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYL 170 ++ HPAS GHGLNLQ+GG+ L++ +L E + Q R+ + G + V V+ + Sbjct: 632 VMLVHPASAGHGLNLQFGGHTLIWTTLPDSNEHYGQTPARLN-----RLGQTKPVVVHTI 686 Query: 171 IAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 + +NTID + L K Q+ L+ A + E Sbjct: 687 LTENTIDMAMPGALSDKQASQERLMQATRSE 717 >gi|303238092|ref|ZP_07324632.1| SNF2 family N-terminal domain protein [Prevotella disiens FB035-09AN] gi|302481727|gb|EFL44782.1| SNF2 family N-terminal domain protein [Prevotella disiens FB035-09AN] Length = 1337 Score = 165 bits (419), Expect = 3e-39, Method: Composition-based stats. Identities = 53/209 (25%), Positives = 88/209 (42%), Gaps = 21/209 (10%) Query: 1 MKQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 M +Y + + ++ E + ++ ++ + QLA D K W+ V K A Sbjct: 1119 MARYELQRAQAEAMVEVEKNVSVSTLAEITRLRQLACSTALVD--KKWEGVSS-KTLAFI 1175 Query: 61 VIIEKAN--AAPIIVAYHFNSDLARLQKAFPQ----------GRTLDKDPCTIQEWNEGK 108 + E N +V F S A ++K + + K ++E+ EG Sbjct: 1176 DLAESLNDSGNRALVFSQFTSYFAEIKKMMDKTHLPYLYLDGSTPMKKREQLVREFQEGD 1235 Query: 109 IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVY 168 P + G GLNL G N ++ WW+ QQ +R + G ++ V VY Sbjct: 1236 CPFFLISLKAGGLGLNLT-GANYVIHLDPWWNPAIEQQATDR-----AYRIGQEQDVTVY 1289 Query: 169 YLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 LIAQ+TI+E +L+ +TK + D LL Sbjct: 1290 RLIAQHTIEEKILRLHKTKRDLADSLLEG 1318 >gi|19552947|ref|NP_600949.1| helicase [Corynebacterium glutamicum ATCC 13032] gi|62390624|ref|YP_226026.1| superfamily II DNA/RNA helicase [Corynebacterium glutamicum ATCC 13032] gi|21324512|dbj|BAB99136.1| Superfamily II DNA/RNA helicases, SNF2 family [Corynebacterium glutamicum ATCC 13032] gi|41325962|emb|CAF20125.1| Superfamily II DNA/RNA helicase [Corynebacterium glutamicum ATCC 13032] Length = 613 Score = 165 bits (418), Expect = 3e-39, Method: Composition-based stats. Identities = 62/237 (26%), Positives = 98/237 (41%), Gaps = 58/237 (24%) Query: 20 IEAFNSASKTVKCLQLANGAVYYDEEKHWKE----------------------------- 50 I A ++A+ +K LQ A GAVY D E + Sbjct: 382 ISAVHAATLRMKLLQYAGGAVYVDPEDSAQSQDLDASTARDVIDATNTAMTTITSRPTMI 441 Query: 51 VHDEKIKALEVII--EKANAAPI-----------------IVAYHFNSDLARLQKAFPQG 91 VH K++ + I+ P+ +VAY F SD L Q Sbjct: 442 VHLHKVRKVIEILCNPALGGEPVNIDQDETGKQVYTPTPTLVAYRFISDKEILLHYLAQA 501 Query: 92 -----RTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 D P + WN G+IP+L PAS GHGLN Q+GG+ LV+++L + E + Q Sbjct: 502 GVQGVEVFDGSPDMLSRWNAGRIPVLLLQPASAGHGLNFQHGGHRLVWYNLPDNNEHYMQ 561 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETI 203 R+ + G K V ++ +I +T D + L K+ Q L++A++++ + Sbjct: 562 ANARL-----HRIGQKNPVTIHRIITADTYDANMPAILAGKANRQQRLIDAVRRDPV 613 >gi|158320324|ref|YP_001512831.1| helicase domain-containing protein [Alkaliphilus oremlandii OhILAs] gi|158140523|gb|ABW18835.1| helicase domain protein [Alkaliphilus oremlandii OhILAs] Length = 419 Score = 165 bits (418), Expect = 3e-39, Method: Composition-based stats. Identities = 46/206 (22%), Positives = 88/206 (42%), Gaps = 18/206 (8%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEV 61 K Y + ++ Y L+ + A N +K ++ QL G + D+ K++ K+ AL+ Sbjct: 211 KLYKRILKDSYVQLEKGEVTAQNLLTKLLRLSQLTGGFIGADD-GTIKQISKAKLDALKE 269 Query: 62 IIEKAN--AAPIIVAYHFNSDLARLQKAFPQ---------GRTLDKDPCTIQEWNEGKIP 110 IIE ++V F ++ ++ + G D+ + E + Sbjct: 270 IIEDMKDAGKKLVVFARFLPEINAIKNMLDEMEISYSYITGEVKDRGEEVRKFQEEDGVR 329 Query: 111 LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYL 170 + A + G G+ L + + +VF+SL ++ + Q RI + G K +L Sbjct: 330 VFIAQIQTAGLGITL-HAADTVVFYSLDFNYANYSQARARI-----HRIGQKNTCTYIHL 383 Query: 171 IAQNTIDELVLQRLRTKSTIQDLLLN 196 IA T+DE +L+ L K I +++ Sbjct: 384 IAPGTVDEKILKALEKKENIAKQIVD 409 >gi|227544270|ref|ZP_03974319.1| possible helicase [Lactobacillus reuteri CF48-3A] gi|227185750|gb|EEI65821.1| possible helicase [Lactobacillus reuteri CF48-3A] Length = 224 Score = 165 bits (417), Expect = 4e-39, Method: Composition-based stats. Identities = 57/128 (44%), Positives = 78/128 (60%), Gaps = 3/128 (2%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEV 61 Y + +L QG+ I+A N+AS + K Q+ANG VY D+++ ++H K+ ALE Sbjct: 100 AIYDELNAQLVVSTQGKQIDALNAASLSNKLCQMANGCVY-DDQQQIVQIHQRKLDALED 158 Query: 62 IIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGH 121 ++E AN P++VAY F DL +++ F K P IQ+WN GKIPL HPAS GH Sbjct: 159 LVEAANGKPVLVAYWFKHDLIQIKSRFKVREI--KTPRDIQDWNAGKIPLALIHPASAGH 216 Query: 122 GLNLQYGG 129 GLNLQ GG Sbjct: 217 GLNLQAGG 224 >gi|327313991|ref|YP_004329428.1| SNF2 family N-terminal domain-containing protein [Prevotella denticola F0289] gi|326946179|gb|AEA22064.1| SNF2 family N-terminal domain protein [Prevotella denticola F0289] Length = 1340 Score = 163 bits (414), Expect = 1e-38, Method: Composition-based stats. Identities = 48/209 (22%), Positives = 89/209 (42%), Gaps = 21/209 (10%) Query: 1 MKQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 M Y +RE ++ + ++ ++ + Q+A D + WK + K+ A Sbjct: 1121 MAMYEVRRRETEERVRANVGDKMSTLAEITRLRQMACSCSLVD--RKWK-LPSSKVLAFI 1177 Query: 61 VIIEKAN--AAPIIVAYHFNSDLARLQKAFPQGRT----------LDKDPCTIQEWNEGK 108 + E + +V F S +++A + + + ++++ GK Sbjct: 1178 DLAESLDESGNRALVFSQFTSFFEEVKQAMDKAKLSYLYLDGSTPMAMREKLVKDFQTGK 1237 Query: 109 IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVY 168 P + G GLNL G N ++ WW+ QQ +R + G K+ V VY Sbjct: 1238 CPFFLISLKAGGLGLNLT-GANYVIHLDPWWNPAIEQQATDR-----AYRIGQKQNVTVY 1291 Query: 169 YLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 +LI+Q+TI+E +L+ +TK + D LL Sbjct: 1292 HLISQHTIEEKILRLHKTKRNLSDSLLEG 1320 >gi|325853079|ref|ZP_08171228.1| SNF2 family N-terminal domain protein [Prevotella denticola CRIS 18C-A] gi|325484453|gb|EGC87374.1| SNF2 family N-terminal domain protein [Prevotella denticola CRIS 18C-A] Length = 1302 Score = 163 bits (413), Expect = 1e-38, Method: Composition-based stats. Identities = 48/209 (22%), Positives = 89/209 (42%), Gaps = 21/209 (10%) Query: 1 MKQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 M Y +RE ++ + ++ ++ + Q+A D + WK + K+ A Sbjct: 1083 MAMYEVRRRETEERVRANVGDKMSTLAEITRLRQMACSCSLVD--RKWK-LPSSKVLAFI 1139 Query: 61 VIIEKAN--AAPIIVAYHFNSDLARLQKAFPQGRT----------LDKDPCTIQEWNEGK 108 + E + +V F S +++A + + + ++++ GK Sbjct: 1140 DLAESLDESGNRALVFSQFTSFFEEVKQAMDKAKLSYLYLDGSMPMAMREKLVKDFQTGK 1199 Query: 109 IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVY 168 P + G GLNL G N ++ WW+ QQ +R + G K+ V VY Sbjct: 1200 CPFFLISLKAGGLGLNLT-GANYVIHLDPWWNPAIEQQATDR-----AYRIGQKQNVTVY 1253 Query: 169 YLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 +LI+Q+TI+E +L+ +TK + D LL Sbjct: 1254 HLISQHTIEEKILRLHKTKRNLSDSLLEG 1282 >gi|160944098|ref|ZP_02091328.1| hypothetical protein FAEPRAM212_01600 [Faecalibacterium prausnitzii M21/2] gi|158444774|gb|EDP21778.1| hypothetical protein FAEPRAM212_01600 [Faecalibacterium prausnitzii M21/2] Length = 562 Score = 161 bits (408), Expect = 5e-38, Method: Composition-based stats. Identities = 44/213 (20%), Positives = 98/213 (46%), Gaps = 21/213 (9%) Query: 2 KQYHKFQRELYCDLQ-GENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 K Y + +R + +L G++I A +K ++ +QL G D+ ++V+ K+ ALE Sbjct: 353 KLYEQLRRSSFAELDSGDSITATTVLTKMLRLMQLTGGFTQTDDGTRPQQVNTAKLDALE 412 Query: 61 VIIEK---ANAAPIIVAYHFNSDLARL-----QKAFPQGRTLDKDPCT-----IQEW-NE 106 I++ + +++ F +++A + +K P G P + ++ Sbjct: 413 DILDDYVLETGSKLVIFARFRAEIAAIENALRKKGIPYGSIYGDVPQAERGKIVDDFQQN 472 Query: 107 GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVF 166 + + A + G G+ L + ++ VF+S+ ++ + Q + RI + G V Sbjct: 473 PEAKVFVAQIQTAGLGITL-HAASMAVFYSIDYNYANYAQALARI-----HRIGQHNPVT 526 Query: 167 VYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 +L+ +++ID+ VL L K I ++++ + Sbjct: 527 YIHLLVEDSIDDKVLAALENKEDIAKSIVDSWR 559 >gi|330889124|gb|EGH21785.1| helicase/SNF2 domain-containing protein [Pseudomonas syringae pv. mori str. 301020] Length = 914 Score = 160 bits (405), Expect = 1e-37, Method: Composition-based stats. Identities = 43/182 (23%), Positives = 80/182 (43%), Gaps = 20/182 (10%) Query: 29 TVKCLQLANGA--VYYDEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARL 84 +K Q+ V D + K+ K+ +L + E+ A I++ F S L+ + Sbjct: 711 LLKLRQVCCDLRLVNQDMPVNSKQGTSGKLNSLMEMFEELLAEGRKILLFSQFTSMLSLI 770 Query: 85 QKAFPQ---------GRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFF 135 ++ Q G T D+ I ++ GK+P+ + G GLNL + ++ + Sbjct: 771 EEELKQRGIAYALLTGSTRDRR-TPIHDFQSGKLPIFLISLKAGGTGLNLT-AADTVIHY 828 Query: 136 SLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 WW+ Q +R + G + VFVY +IA+ T++E + + R KS + +L Sbjct: 829 DPWWNPAAENQATDR-----AYRIGQDKPVFVYKMIARGTVEEKIQRLQREKSALASGVL 883 Query: 196 NA 197 + Sbjct: 884 DG 885 >gi|302184809|ref|ZP_07261482.1| helicase/SNF2 domain-containing protein [Pseudomonas syringae pv. syringae 642] Length = 880 Score = 160 bits (405), Expect = 1e-37, Method: Composition-based stats. Identities = 43/182 (23%), Positives = 80/182 (43%), Gaps = 20/182 (10%) Query: 29 TVKCLQLANGA--VYYDEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARL 84 +K Q+ V D + K+ K+ +L + E+ A I++ F S L+ + Sbjct: 677 LLKLRQVCCDLRLVNQDMPVNSKQGTSGKLNSLMEMFEELLAEGRKILLFSQFTSMLSLI 736 Query: 85 QKAFPQ---------GRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFF 135 ++ Q G T D+ I ++ GK+P+ + G GLNL + ++ + Sbjct: 737 EEELKQRGIAYALLTGSTRDRR-TPIHDFQSGKLPIFLISLKAGGTGLNLT-AADTVIHY 794 Query: 136 SLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 WW+ Q +R + G + VFVY +IA+ T++E + + R KS + +L Sbjct: 795 DPWWNPAAENQATDR-----AYRIGQDKPVFVYKMIARGTVEEKIQRLQREKSALASGVL 849 Query: 196 NA 197 + Sbjct: 850 DG 851 >gi|167630922|ref|YP_001681421.1| snf2 family helicase [Heliobacterium modesticaldum Ice1] gi|167593662|gb|ABZ85410.1| snf2 family helicase [Heliobacterium modesticaldum Ice1] Length = 449 Score = 160 bits (405), Expect = 1e-37, Method: Composition-based stats. Identities = 48/211 (22%), Positives = 91/211 (43%), Gaps = 17/211 (8%) Query: 1 MKQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 MK Y R+ Y +L + A N ++ ++ Q+ G + E + V K +ALE Sbjct: 233 MKIYRDLVRDSYAELGKGEVTATNILTRLLRLSQITGGFIGGGEGGPVQRVSTAKEEALE 292 Query: 61 VIIEK--ANAAPIIVAYHFNSDLARLQKAFPQ---------GRTLDKDPCTIQEWNEGKI 109 IIE + +++ F ++ + + + G D++ N ++ Sbjct: 293 DIIEDVLQSGKKLVIIARFIPEINAICRLLEKKGIRYSLLMGGVKDREEQVSAFQNGPEV 352 Query: 110 PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYY 169 + A+ G G+ L + +VF+SL + + +Q RI + G K Y Sbjct: 353 QVFVGQIATAGLGVTLT-AASTMVFYSLDYSMSNFEQARARI-----HRVGQKENCTYLY 406 Query: 170 LIAQNTIDELVLQRLRTKSTIQDLLLNALKK 200 L A+ T+DE VL+ LR K+ + +L++ + Sbjct: 407 LTAKGTVDEKVLKALRDKADLARMLVDDYRS 437 >gi|330954490|gb|EGH54750.1| helicase/SNF2 domain-containing protein [Pseudomonas syringae Cit 7] Length = 914 Score = 160 bits (404), Expect = 1e-37, Method: Composition-based stats. Identities = 43/182 (23%), Positives = 80/182 (43%), Gaps = 20/182 (10%) Query: 29 TVKCLQLANGA--VYYDEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARL 84 +K Q+ V D + K+ K+ +L + E+ A I++ F S L+ + Sbjct: 711 LLKLRQVCCDLRLVNQDMPVNSKQGTSGKLNSLMEMFEELLAEGRKILLFSQFTSMLSLI 770 Query: 85 QKAFPQ---------GRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFF 135 ++ Q G T D+ I ++ GK+P+ + G GLNL + ++ + Sbjct: 771 EEELKQRGIAYALLTGSTRDRR-TPIHDFQSGKLPIFLISLKAGGTGLNLT-AADTVIHY 828 Query: 136 SLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 WW+ Q +R + G + VFVY +IA+ T++E + + R KS + +L Sbjct: 829 DPWWNPAAENQATDR-----AYRIGQDKPVFVYKMIARGTVEEKIQRLQREKSALASGVL 883 Query: 196 NA 197 + Sbjct: 884 DG 885 >gi|330897626|gb|EGH29045.1| SNF2-related:helicase [Pseudomonas syringae pv. japonica str. M301072PT] Length = 559 Score = 160 bits (404), Expect = 1e-37, Method: Composition-based stats. Identities = 43/182 (23%), Positives = 80/182 (43%), Gaps = 20/182 (10%) Query: 29 TVKCLQLANGA--VYYDEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARL 84 +K Q+ V D + K+ K+ +L + E+ A I++ F S L+ + Sbjct: 356 LLKLRQVCCDLRLVNQDMPVNSKQGTSGKLNSLMEMFEELLAEGRKILLFSQFTSMLSLI 415 Query: 85 QKAFPQ---------GRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFF 135 ++ Q G T D+ I ++ GK+P+ + G GLNL + ++ + Sbjct: 416 EEELKQRGIAYALLTGSTRDRR-TPIHDFQSGKLPIFLISLKAGGTGLNLT-AADTVIHY 473 Query: 136 SLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 WW+ Q +R + G + VFVY +IA+ T++E + + R KS + +L Sbjct: 474 DPWWNPAAENQATDR-----AYRIGQDKPVFVYKMIARGTVEEKIQRLQREKSALASGVL 528 Query: 196 NA 197 + Sbjct: 529 DG 530 >gi|66045135|ref|YP_234976.1| SNF2-related:helicase, C-terminal:SWIM Zn-finger [Pseudomonas syringae pv. syringae B728a] gi|63255842|gb|AAY36938.1| SNF2-related:Helicase, C-terminal:SWIM Zn-finger [Pseudomonas syringae pv. syringae B728a] Length = 914 Score = 160 bits (404), Expect = 2e-37, Method: Composition-based stats. Identities = 43/182 (23%), Positives = 80/182 (43%), Gaps = 20/182 (10%) Query: 29 TVKCLQLANGA--VYYDEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARL 84 +K Q+ V D + K+ K+ +L + E+ A I++ F S L+ + Sbjct: 711 LLKLRQVCCDLRLVNQDMPVNSKQGTSGKLNSLMEMFEELLAEGRKILLFSQFTSMLSLI 770 Query: 85 QKAFPQ---------GRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFF 135 ++ Q G T D+ I ++ GK+P+ + G GLNL + ++ + Sbjct: 771 EEELKQRGIAYALLTGSTRDRR-TPIHDFQSGKLPIFLISLKAGGTGLNLT-AADTVIHY 828 Query: 136 SLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 WW+ Q +R + G + VFVY +IA+ T++E + + R KS + +L Sbjct: 829 DPWWNPAAENQATDR-----AYRIGQDKPVFVYKMIARGTVEEKIQRLQREKSALASGVL 883 Query: 196 NA 197 + Sbjct: 884 DG 885 >gi|301381674|ref|ZP_07230092.1| helicase/SNF2 family domain protein [Pseudomonas syringae pv. tomato Max13] Length = 918 Score = 159 bits (403), Expect = 2e-37, Method: Composition-based stats. Identities = 43/182 (23%), Positives = 81/182 (44%), Gaps = 20/182 (10%) Query: 29 TVKCLQLANGA--VYYDEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARL 84 +K Q+ V +D + K+ K+ +L + E+ A I++ F S L+ + Sbjct: 715 LLKLRQVCCDLRLVNHDMPVNSKQGTSGKLNSLMEMFEELLAEGRKILLFSQFTSMLSLI 774 Query: 85 QKAFPQ---------GRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFF 135 ++ Q G T D+ I ++ GK+P+ + G GLNL + ++ + Sbjct: 775 EEELKQRGIAYALLTGSTRDRR-TPIHDFQSGKLPIFLISLKAGGTGLNLT-AADTVIHY 832 Query: 136 SLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 WW+ Q +R + G + VFVY +IA+ T++E + + R KS + +L Sbjct: 833 DPWWNPAAENQATDR-----AYRIGQDKPVFVYKMIARGTVEEKIQRLQREKSALAAGVL 887 Query: 196 NA 197 + Sbjct: 888 DG 889 >gi|330878594|gb|EGH12743.1| helicase/SNF2 family domain-containing protein [Pseudomonas syringae pv. morsprunorum str. M302280PT] Length = 918 Score = 159 bits (403), Expect = 2e-37, Method: Composition-based stats. Identities = 43/182 (23%), Positives = 81/182 (44%), Gaps = 20/182 (10%) Query: 29 TVKCLQLANGA--VYYDEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARL 84 +K Q+ V +D + K+ K+ +L + E+ A I++ F S L+ + Sbjct: 715 LLKLRQVCCDLRLVNHDMPVNSKQGTSGKLNSLMEMFEELLAEGRKILLFSQFTSMLSLI 774 Query: 85 QKAFPQ---------GRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFF 135 ++ Q G T D+ I ++ GK+P+ + G GLNL + ++ + Sbjct: 775 EEELKQRGIAYALLTGSTRDRR-TPIHDFQSGKLPIFLISLKAGGTGLNLT-AADTVIHY 832 Query: 136 SLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 WW+ Q +R + G + VFVY +IA+ T++E + + R KS + +L Sbjct: 833 DPWWNPAAENQATDR-----AYRIGQDKPVFVYKMIARGTVEEKIQRLQREKSALAAGVL 887 Query: 196 NA 197 + Sbjct: 888 DG 889 >gi|330961339|gb|EGH61599.1| helicase/SNF2 family domain-containing protein [Pseudomonas syringae pv. maculicola str. ES4326] Length = 885 Score = 159 bits (402), Expect = 2e-37, Method: Composition-based stats. Identities = 43/182 (23%), Positives = 81/182 (44%), Gaps = 20/182 (10%) Query: 29 TVKCLQLANGA--VYYDEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARL 84 +K Q+ V +D + K+ K+ +L + E+ A I++ F S L+ + Sbjct: 682 LLKLRQVCCDLRLVNHDMPVNSKQGTSGKLNSLMEMFEELLAEGRKILLFSQFTSMLSLI 741 Query: 85 QKAFPQ---------GRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFF 135 ++ Q G T D+ I ++ GK+P+ + G GLNL + ++ + Sbjct: 742 EEELKQRGIAYALLTGSTRDRR-TPIHDFQSGKLPIFLISLKAGGTGLNLT-AADTVIHY 799 Query: 136 SLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 WW+ Q +R + G + VFVY +IA+ T++E + + R KS + +L Sbjct: 800 DPWWNPAAENQATDR-----AYRIGQDKPVFVYKMIARGTVEEKIQRLQREKSALAAGVL 854 Query: 196 NA 197 + Sbjct: 855 DG 856 >gi|330967945|gb|EGH68205.1| helicase/SNF2 family domain-containing protein [Pseudomonas syringae pv. actinidiae str. M302091] Length = 918 Score = 159 bits (402), Expect = 2e-37, Method: Composition-based stats. Identities = 43/182 (23%), Positives = 81/182 (44%), Gaps = 20/182 (10%) Query: 29 TVKCLQLANGA--VYYDEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARL 84 +K Q+ V +D + K+ K+ +L + E+ A I++ F S L+ + Sbjct: 715 LLKLRQVCCDLRLVNHDMPVNSKQGTSGKLNSLMEMFEELLAEGRKILLFSQFTSMLSLI 774 Query: 85 QKAFPQ---------GRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFF 135 ++ Q G T D+ I ++ GK+P+ + G GLNL + ++ + Sbjct: 775 EEELKQRGIAYALLTGSTRDRR-TPIHDFQSGKLPIFLISLKAGGTGLNLT-AADTVIHY 832 Query: 136 SLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 WW+ Q +R + G + VFVY +IA+ T++E + + R KS + +L Sbjct: 833 DPWWNPAAENQATDR-----AYRIGQDKPVFVYKMIARGTVEEKIQRLQREKSALAAGVL 887 Query: 196 NA 197 + Sbjct: 888 DG 889 >gi|331019536|gb|EGH99592.1| helicase/SNF2 family domain protein [Pseudomonas syringae pv. lachrymans str. M302278PT] Length = 918 Score = 159 bits (402), Expect = 2e-37, Method: Composition-based stats. Identities = 43/182 (23%), Positives = 81/182 (44%), Gaps = 20/182 (10%) Query: 29 TVKCLQLANGA--VYYDEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARL 84 +K Q+ V +D + K+ K+ +L + E+ A I++ F S L+ + Sbjct: 715 LLKLRQVCCDLRLVNHDMPVNSKQGTSGKLNSLMEMFEELLAEGRKILLFSQFTSMLSLI 774 Query: 85 QKAFPQ---------GRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFF 135 ++ Q G T D+ I ++ GK+P+ + G GLNL + ++ + Sbjct: 775 EEELKQRGIAYALLTGSTRDRR-TPIHDFQSGKLPIFLISLKAGGTGLNLT-AADTVIHY 832 Query: 136 SLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 WW+ Q +R + G + VFVY +IA+ T++E + + R KS + +L Sbjct: 833 DPWWNPAAENQATDR-----AYRIGQDKPVFVYKMIARGTVEEKIQRLQREKSALAAGVL 887 Query: 196 NA 197 + Sbjct: 888 DG 889 >gi|213967360|ref|ZP_03395508.1| helicase/SNF2 family domain protein [Pseudomonas syringae pv. tomato T1] gi|302058432|ref|ZP_07249973.1| helicase/SNF2 family domain protein [Pseudomonas syringae pv. tomato K40] gi|302131163|ref|ZP_07257153.1| helicase/SNF2 family domain protein [Pseudomonas syringae pv. tomato NCPPB 1108] gi|213927661|gb|EEB61208.1| helicase/SNF2 family domain protein [Pseudomonas syringae pv. tomato T1] Length = 918 Score = 159 bits (402), Expect = 2e-37, Method: Composition-based stats. Identities = 43/182 (23%), Positives = 81/182 (44%), Gaps = 20/182 (10%) Query: 29 TVKCLQLANGA--VYYDEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARL 84 +K Q+ V +D + K+ K+ +L + E+ A I++ F S L+ + Sbjct: 715 LLKLRQVCCDLRLVNHDMPVNSKQGTSGKLNSLMEMFEELLAEGRKILLFSQFTSMLSLI 774 Query: 85 QKAFPQ---------GRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFF 135 ++ Q G T D+ I ++ GK+P+ + G GLNL + ++ + Sbjct: 775 EEELKQRGIAYALLTGSTRDRR-TPIHDFQSGKLPIFLISLKAGGTGLNLT-AADTVIHY 832 Query: 136 SLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 WW+ Q +R + G + VFVY +IA+ T++E + + R KS + +L Sbjct: 833 DPWWNPAAENQATDR-----AYRIGQDKPVFVYKMIARGTVEEKIQRLQREKSALAAGVL 887 Query: 196 NA 197 + Sbjct: 888 DG 889 >gi|28869303|ref|NP_791922.1| helicase/SNF2 family domain-containing protein [Pseudomonas syringae pv. tomato str. DC3000] gi|28852544|gb|AAO55617.1| helicase/SNF2 family domain protein [Pseudomonas syringae pv. tomato str. DC3000] Length = 918 Score = 159 bits (402), Expect = 2e-37, Method: Composition-based stats. Identities = 43/182 (23%), Positives = 81/182 (44%), Gaps = 20/182 (10%) Query: 29 TVKCLQLANGA--VYYDEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARL 84 +K Q+ V +D + K+ K+ +L + E+ A I++ F S L+ + Sbjct: 715 LLKLRQVCCDLRLVNHDMPVNSKQGTSGKLNSLMEMFEELLAEGRKILLFSQFTSMLSLI 774 Query: 85 QKAFPQ---------GRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFF 135 ++ Q G T D+ I ++ GK+P+ + G GLNL + ++ + Sbjct: 775 EEELKQRGIAYALLTGSTRDRR-TPIHDFQSGKLPIFLISLKAGGTGLNLT-AADTVIHY 832 Query: 136 SLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 WW+ Q +R + G + VFVY +IA+ T++E + + R KS + +L Sbjct: 833 DPWWNPAAENQATDR-----AYRIGQDKPVFVYKMIARGTVEEKIQRLQREKSALAAGVL 887 Query: 196 NA 197 + Sbjct: 888 DG 889 >gi|330973232|gb|EGH73298.1| SNF2-related:helicase [Pseudomonas syringae pv. aceris str. M302273PT] Length = 880 Score = 159 bits (402), Expect = 2e-37, Method: Composition-based stats. Identities = 43/182 (23%), Positives = 80/182 (43%), Gaps = 20/182 (10%) Query: 29 TVKCLQLANGA--VYYDEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARL 84 +K Q+ V D + K+ K+ +L + E+ A I++ F S L+ + Sbjct: 677 LLKLRQVCCDLRLVNQDLPVNSKQGTSGKLNSLMEMFEELLAEGRKILLFSQFTSMLSLI 736 Query: 85 QKAFPQ---------GRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFF 135 ++ Q G T D+ I ++ GK+P+ + G GLNL + ++ + Sbjct: 737 EEELKQRGIAYALLTGSTRDRR-TPIHDFQSGKLPIFLISLKAGGTGLNLT-AADTVIHY 794 Query: 136 SLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 WW+ Q +R + G + VFVY +IA+ T++E + + R KS + +L Sbjct: 795 DPWWNPAAENQATDR-----AYRIGQDKPVFVYKMIARGTVEEKIQRLQREKSALASGVL 849 Query: 196 NA 197 + Sbjct: 850 DG 851 >gi|282880921|ref|ZP_06289612.1| SNF2 family N-terminal domain protein [Prevotella timonensis CRIS 5C-B1] gi|281305144|gb|EFA97213.1| SNF2 family N-terminal domain protein [Prevotella timonensis CRIS 5C-B1] Length = 1254 Score = 159 bits (402), Expect = 2e-37, Method: Composition-based stats. Identities = 49/209 (23%), Positives = 84/209 (40%), Gaps = 21/209 (10%) Query: 1 MKQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 + Y +++ E ++ S+ K Q+A D K WK+ K+ Sbjct: 1036 LAMYELHRKKAEELALAEEGVKLSTLSEITKLRQMACSISLVD--KTWKKTSS-KLSTFI 1092 Query: 61 VIIEKAN--AAPIIVAYHFNSDLARLQKAFPQ----------GRTLDKDPCTIQEWNEGK 108 + E N +V F S LA +++ + + K + E+ +G Sbjct: 1093 ALAESLNDSGGRALVFSQFTSFLAEVRQVMDKIKLPYLYLDGATPIKKREEIVDEFQKGN 1152 Query: 109 IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVY 168 P + G GLNL N ++ WW+ QQ +R + G + V VY Sbjct: 1153 YPFFLISLKAGGLGLNLT-AANYVIHLDPWWNPAIEQQATDR-----AYRIGQRNDVTVY 1206 Query: 169 YLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 +LIAQ+TI+E +++ +TK + D LL Sbjct: 1207 HLIAQHTIEEKIIRLHKTKRDLADSLLEG 1235 >gi|71733698|ref|YP_274080.1| helicase/SNF2 domain-containing protein [Pseudomonas syringae pv. phaseolicola 1448A] gi|71554251|gb|AAZ33462.1| helicase/SNF2 family domain protein [Pseudomonas syringae pv. phaseolicola 1448A] Length = 914 Score = 159 bits (402), Expect = 3e-37, Method: Composition-based stats. Identities = 43/182 (23%), Positives = 80/182 (43%), Gaps = 20/182 (10%) Query: 29 TVKCLQLANGA--VYYDEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARL 84 +K Q+ V D + K+ K+ +L + E+ A I++ F S L+ + Sbjct: 711 LLKLRQVCCDLRLVNQDMPVNSKQGTSGKLNSLMEMFEELLAEGRKILLFSQFTSMLSLI 770 Query: 85 QKAFPQ---------GRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFF 135 ++ Q G T D+ I ++ GK+P+ + G GLNL + ++ + Sbjct: 771 EEELKQRGIAYALLTGSTRDRR-TPIHDFQSGKLPIFLISLKAGGTGLNLT-AADTVIHY 828 Query: 136 SLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 WW+ Q +R + G + VFVY +IA+ T++E + + R KS + +L Sbjct: 829 DPWWNPAAENQATDR-----AYRIGQDKPVFVYKMIARGTVEEKIQRLQREKSALAAGVL 883 Query: 196 NA 197 + Sbjct: 884 DG 885 >gi|237797684|ref|ZP_04586145.1| SNF2-related:helicase [Pseudomonas syringae pv. oryzae str. 1_6] gi|331020534|gb|EGI00591.1| SNF2-related:helicase [Pseudomonas syringae pv. oryzae str. 1_6] Length = 918 Score = 158 bits (401), Expect = 3e-37, Method: Composition-based stats. Identities = 43/182 (23%), Positives = 80/182 (43%), Gaps = 20/182 (10%) Query: 29 TVKCLQLANGA--VYYDEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARL 84 +K Q+ V D + K+ K+ +L + E+ A I++ F S L+ + Sbjct: 715 LLKLRQVCCDLRLVNQDMPANSKQGTSGKLNSLMEMFEELLAEGRKILLFSQFTSMLSLI 774 Query: 85 QKAFPQ---------GRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFF 135 ++ Q G T D+ I ++ GK+P+ + G GLNL + ++ + Sbjct: 775 EEELKQRGIAYALLTGSTRDRR-TPIHDFQSGKLPIFLISLKAGGTGLNLT-AADTVIHY 832 Query: 136 SLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 WW+ Q +R + G + VFVY +IA+ T++E + + R KS + +L Sbjct: 833 DPWWNPAAENQATDR-----AYRIGQDKPVFVYKMIARGTVEEKIQRLQREKSALAAGVL 887 Query: 196 NA 197 + Sbjct: 888 DG 889 >gi|320324786|gb|EFW80858.1| helicase/SNF2 domain-containing protein [Pseudomonas syringae pv. glycinea str. B076] gi|330986243|gb|EGH84346.1| helicase/SNF2 domain-containing protein [Pseudomonas syringae pv. lachrymans str. M301315] gi|331013173|gb|EGH93229.1| helicase/SNF2 domain-containing protein [Pseudomonas syringae pv. tabaci ATCC 11528] Length = 914 Score = 158 bits (401), Expect = 3e-37, Method: Composition-based stats. Identities = 43/182 (23%), Positives = 80/182 (43%), Gaps = 20/182 (10%) Query: 29 TVKCLQLANGA--VYYDEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARL 84 +K Q+ V D + K+ K+ +L + E+ A I++ F S L+ + Sbjct: 711 LLKLRQVCCDLRLVNQDMPVNSKQGTSGKLNSLMEMFEELLAEGRKILLFSQFTSMLSLI 770 Query: 85 QKAFPQ---------GRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFF 135 ++ Q G T D+ I ++ GK+P+ + G GLNL + ++ + Sbjct: 771 EEELKQRGIAYALLTGSTRDRR-TPIHDFQSGKLPIFLISLKAGGTGLNLT-AADTVIHY 828 Query: 136 SLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 WW+ Q +R + G + VFVY +IA+ T++E + + R KS + +L Sbjct: 829 DPWWNPAAENQATDR-----AYRIGQDKPVFVYKMIARGTVEEKIQRLQREKSALAAGVL 883 Query: 196 NA 197 + Sbjct: 884 DG 885 >gi|289624075|ref|ZP_06457029.1| helicase/SNF2 domain-containing protein [Pseudomonas syringae pv. aesculi str. NCPPB3681] gi|330869863|gb|EGH04572.1| helicase/SNF2 domain-containing protein [Pseudomonas syringae pv. aesculi str. 0893_23] Length = 914 Score = 158 bits (401), Expect = 3e-37, Method: Composition-based stats. Identities = 43/182 (23%), Positives = 80/182 (43%), Gaps = 20/182 (10%) Query: 29 TVKCLQLANGA--VYYDEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARL 84 +K Q+ V D + K+ K+ +L + E+ A I++ F S L+ + Sbjct: 711 LLKLRQVCCDLRLVNQDMPVNSKQGTSGKLNSLMEMFEELLAEGRKILLFSQFTSMLSLI 770 Query: 85 QKAFPQ---------GRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFF 135 ++ Q G T D+ I ++ GK+P+ + G GLNL + ++ + Sbjct: 771 EEELKQRGIAYALLTGSTRDRR-TPIHDFQSGKLPIFLISLKAGGTGLNLT-AADTVIHY 828 Query: 136 SLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 WW+ Q +R + G + VFVY +IA+ T++E + + R KS + +L Sbjct: 829 DPWWNPAAENQATDR-----AYRIGQDKPVFVYKMIARGTVEEKIQRLQREKSALAAGVL 883 Query: 196 NA 197 + Sbjct: 884 DG 885 >gi|298486414|ref|ZP_07004475.1| helicase/SNF2 family domain protein [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] gi|298159042|gb|EFI00102.1| helicase/SNF2 family domain protein [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] Length = 914 Score = 158 bits (401), Expect = 3e-37, Method: Composition-based stats. Identities = 43/182 (23%), Positives = 80/182 (43%), Gaps = 20/182 (10%) Query: 29 TVKCLQLANGA--VYYDEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARL 84 +K Q+ V D + K+ K+ +L + E+ A I++ F S L+ + Sbjct: 711 LLKLRQVCCDLRLVNQDMPVNSKQGTSGKLNSLMEMFEELLAEGRKILLFSQFTSMLSLI 770 Query: 85 QKAFPQ---------GRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFF 135 ++ Q G T D+ I ++ GK+P+ + G GLNL + ++ + Sbjct: 771 EEELKQRGIAYALLTGSTRDRR-TPIHDFQSGKLPIFLISLKAGGTGLNLT-AADTVIHY 828 Query: 136 SLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 WW+ Q +R + G + VFVY +IA+ T++E + + R KS + +L Sbjct: 829 DPWWNPAAENQATDR-----AYRIGQDKPVFVYKMIARGTVEEKIQRLQREKSALAAGVL 883 Query: 196 NA 197 + Sbjct: 884 DG 885 >gi|289648568|ref|ZP_06479911.1| helicase/SNF2 domain-containing protein [Pseudomonas syringae pv. aesculi str. 2250] Length = 914 Score = 158 bits (401), Expect = 3e-37, Method: Composition-based stats. Identities = 43/182 (23%), Positives = 80/182 (43%), Gaps = 20/182 (10%) Query: 29 TVKCLQLANGA--VYYDEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARL 84 +K Q+ V D + K+ K+ +L + E+ A I++ F S L+ + Sbjct: 711 LLKLRQVCCDLRLVNQDMPVNSKQGTSGKLNSLMEMFEELLAEGRKILLFSQFTSMLSLI 770 Query: 85 QKAFPQ---------GRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFF 135 ++ Q G T D+ I ++ GK+P+ + G GLNL + ++ + Sbjct: 771 EEELKQRGIAYALLTGSTRDRR-TPIHDFQSGKLPIFLISLKAGGTGLNLT-AADTVIHY 828 Query: 136 SLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 WW+ Q +R + G + VFVY +IA+ T++E + + R KS + +L Sbjct: 829 DPWWNPAAENQATDR-----AYRIGQDKPVFVYKMIARGTVEEKIQRLQREKSALAAGVL 883 Query: 196 NA 197 + Sbjct: 884 DG 885 >gi|42766595|gb|AAS45429.1| prophage-encoded helicase [Selenomonas ruminantium] Length = 126 Score = 158 bits (401), Expect = 3e-37, Method: Composition-based stats. Identities = 47/126 (37%), Positives = 68/126 (53%), Gaps = 7/126 (5%) Query: 75 YHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVF 134 Y F + R+++ + I +WN GKIP+ HPAS GHGLNLQ GG+IL++ Sbjct: 1 YWFKHEAERIRERLKVREI--QTSRDIADWNAGKIPVALIHPASAGHGLNLQEGGSILIW 58 Query: 135 FSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 FSL W LE +QQ R+ + G K V + ++ + TID V++ L K Q L Sbjct: 59 FSLTWSLELYQQTNARL-----YRQGQKDTVSIIHITTEGTIDGDVMKALERKDKTQTAL 113 Query: 195 LNALKK 200 + A+K Sbjct: 114 IEAVKA 119 >gi|330982693|gb|EGH80796.1| SNF2-related:helicase [Pseudomonas syringae pv. aptata str. DSM 50252] Length = 280 Score = 158 bits (399), Expect = 6e-37, Method: Composition-based stats. Identities = 43/182 (23%), Positives = 80/182 (43%), Gaps = 20/182 (10%) Query: 29 TVKCLQLANGA--VYYDEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARL 84 +K Q+ V D + K+ K+ +L + E+ A I++ F S L+ + Sbjct: 77 LLKLRQVCCDLRLVNQDMPVNSKQGTSGKLNSLMEMFEELLAEGRKILLFSQFTSMLSLI 136 Query: 85 QKAFPQ---------GRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFF 135 ++ Q G T D+ I ++ GK+P+ + G GLNL + ++ + Sbjct: 137 EEELKQRGIAYALLTGSTRDRR-TPIHDFQSGKLPIFLISLKAGGTGLNLT-AADTVIHY 194 Query: 136 SLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 WW+ Q +R + G + VFVY +IA+ T++E + + R KS + +L Sbjct: 195 DPWWNPAAENQATDR-----AYRIGQDKPVFVYKMIARGTVEEKIQRLQREKSALASGVL 249 Query: 196 NA 197 + Sbjct: 250 DG 251 >gi|66392086|ref|YP_239310.1| possible DNA helicase [Xanthomonas phage Xp15] gi|62529196|gb|AAX84879.1| possible DNA helicase [Xanthomonas phage Xp15] Length = 587 Score = 157 bits (398), Expect = 7e-37, Method: Composition-based stats. Identities = 54/205 (26%), Positives = 88/205 (42%), Gaps = 17/205 (8%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEV 61 K Y K + +L + + I A N+A K +K LQ+A+GAV DE + K + AL Sbjct: 382 KMYEKMKSDLLVEYEAGEITAVNAAVKAMKLLQIASGAVKDDEGRIVKVDASTREDALWE 441 Query: 62 IIEKANAAPIIVAYHFNSDLARLQKAFP----QGRTLDKD------PCTIQEWNEGKIPL 111 I E +++ F + + L F + T++ D +Q++ + + + Sbjct: 442 IFEGTGETKLVIFAAFRATIDHLVGYFQDRNVKVATINGDVPHALRAKHVQDFQDSDLQV 501 Query: 112 LFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLI 171 L P S HG+ L +V++SL E + Q RI +AG R +Y+LI Sbjct: 502 LIIQPQSSAHGITLT-ASCTIVWYSLVPSGEIYVQANGRIT-----RAGQSRKQTIYHLI 555 Query: 172 AQNTIDELVLQRLRTKSTIQDLLLN 196 + VL L K + LL Sbjct: 556 GCRP-ERHVLDILEGKVSTSQNLLE 579 >gi|323340857|ref|ZP_08081108.1| SWF/SNF family helicase [Lactobacillus ruminis ATCC 25644] gi|323091708|gb|EFZ34329.1| SWF/SNF family helicase [Lactobacillus ruminis ATCC 25644] Length = 975 Score = 157 bits (397), Expect = 9e-37, Method: Composition-based stats. Identities = 50/214 (23%), Positives = 87/214 (40%), Gaps = 30/214 (14%) Query: 3 QYHKFQRELYCDLQGENIE-----AFNSASKTVKCLQLAN--GAVYYDEEKHWKEVHDEK 55 Y EL +L ++ + +K K Q+ VY D + K Sbjct: 756 LYQAMVNELRTELSQKSADEFKQSKIEILAKLTKIRQICCDPSLVYSDYDGE-----SGK 810 Query: 56 IKALEVIIEKA--NAAPIIVAYHFNSDLARLQKAFPQGRT----------LDKDPCTIQE 103 +IE A IIV F S L+ L+K Q + ++ ++E Sbjct: 811 TDNCMELIESALSGGHRIIVFSQFVSMLSILEKKLKQRKIEFYKIVGETPKEERFKMVEE 870 Query: 104 WNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKR 163 +N+ +P+ + G GLNL G ++++ + WW+ Q +R + G + Sbjct: 871 FNQNDVPIFLISLKAGGTGLNL-VGADVIIHYDPWWNEAAQNQATDR-----AHRIGQTK 924 Query: 164 AVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 V VY LI ++TI+E +L+ KS + D +L+ Sbjct: 925 NVLVYKLIVKDTIEEKILKMQEQKSKLADDILSG 958 >gi|330944324|gb|EGH46382.1| SNF2-related:helicase [Pseudomonas syringae pv. pisi str. 1704B] Length = 468 Score = 157 bits (396), Expect = 1e-36, Method: Composition-based stats. Identities = 43/180 (23%), Positives = 79/180 (43%), Gaps = 20/180 (11%) Query: 29 TVKCLQLANGA--VYYDEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARL 84 +K Q+ V D + K+ K+ +L + E+ A I++ F S L+ + Sbjct: 296 LLKLRQVCCDLRLVNQDMPVNSKQGTSGKLNSLMEMFEELLAEGRKILLFSQFTSMLSLI 355 Query: 85 QKAFPQ---------GRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFF 135 ++ Q G T D+ I ++ GK+P+ + G GLNL + ++ + Sbjct: 356 EEELKQRGIAYALLTGSTRDRR-TPIHDFQSGKLPIFLISLKAGGTGLNLT-AADTVIHY 413 Query: 136 SLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 WW+ Q +R + G + VFVY +IA+ T++E + + R KS + +L Sbjct: 414 DPWWNPAAENQATDR-----AYRIGQDKPVFVYKMIARGTVEEKIQRLQREKSALASGVL 468 >gi|323441318|gb|EGA98983.1| phage helicase [Staphylococcus aureus O46] Length = 128 Score = 156 bits (395), Expect = 2e-36, Method: Composition-based stats. Identities = 51/131 (38%), Positives = 73/131 (55%), Gaps = 6/131 (4%) Query: 74 AYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILV 133 Y+F D R+ + F + TL+ D + WN G I LL AHPAS GHGLNLQ GG+I+V Sbjct: 2 FYNFKHDKERILERFKEATTLE-DSNYKERWNSGNIKLLIAHPASAGHGLNLQQGGHIIV 60 Query: 134 FFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDL 193 +F L W LE +QQ R+ + G +++L+ NTID+ V + L+ K Q+ Sbjct: 61 WFGLTWSLELYQQANARL-----YRQGQNHTTIIHHLMTDNTIDQRVYKALQNKELTQEE 115 Query: 194 LLNALKKETIH 204 L+ A+K Sbjct: 116 LMKAIKARIAK 126 >gi|320329151|gb|EFW85148.1| helicase/SNF2 domain-containing protein [Pseudomonas syringae pv. glycinea str. race 4] Length = 914 Score = 156 bits (395), Expect = 2e-36, Method: Composition-based stats. Identities = 42/182 (23%), Positives = 79/182 (43%), Gaps = 20/182 (10%) Query: 29 TVKCLQLANGA--VYYDEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARL 84 +K Q+ V + K+ K+ +L + E+ A I++ F S L+ + Sbjct: 711 LLKLRQVCCDLRLVNQGMPVNSKQGTSGKLNSLMEMFEELLAEGRKILLFSQFTSMLSLI 770 Query: 85 QKAFPQ---------GRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFF 135 ++ Q G T D+ I ++ GK+P+ + G GLNL + ++ + Sbjct: 771 EEELKQRGIAYALLTGSTRDRR-TPIHDFQSGKLPIFLISLKAGGTGLNLT-AADTVIHY 828 Query: 136 SLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 WW+ Q +R + G + VFVY +IA+ T++E + + R KS + +L Sbjct: 829 DPWWNPAAENQATDR-----AYRIGQDKPVFVYKMIARGTVEEKIQRLQREKSALAAGVL 883 Query: 196 NA 197 + Sbjct: 884 DG 885 >gi|330881511|gb|EGH15660.1| helicase/SNF2 domain-containing protein [Pseudomonas syringae pv. glycinea str. race 4] Length = 337 Score = 156 bits (394), Expect = 2e-36, Method: Composition-based stats. Identities = 42/182 (23%), Positives = 79/182 (43%), Gaps = 20/182 (10%) Query: 29 TVKCLQLANGA--VYYDEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARL 84 +K Q+ V + K+ K+ +L + E+ A I++ F S L+ + Sbjct: 134 LLKLRQVCCDLRLVNQGMPVNSKQGTSGKLNSLMEMFEELLAEGRKILLFSQFTSMLSLI 193 Query: 85 QKAFPQ---------GRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFF 135 ++ Q G T D+ I ++ GK+P+ + G GLNL + ++ + Sbjct: 194 EEELKQRGIAYALLTGSTRDRR-TPIHDFQSGKLPIFLISLKAGGTGLNLT-AADTVIHY 251 Query: 136 SLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 WW+ Q +R + G + VFVY +IA+ T++E + + R KS + +L Sbjct: 252 DPWWNPAAENQATDR-----AYRIGQDKPVFVYKMIARGTVEEKIQRLQREKSALAAGVL 306 Query: 196 NA 197 + Sbjct: 307 DG 308 >gi|315650529|ref|ZP_07903595.1| Snf2 family helicase [Eubacterium saburreum DSM 3986] gi|315487184|gb|EFU77500.1| Snf2 family helicase [Eubacterium saburreum DSM 3986] Length = 1142 Score = 155 bits (392), Expect = 3e-36, Method: Composition-based stats. Identities = 39/185 (21%), Positives = 74/185 (40%), Gaps = 25/185 (13%) Query: 26 ASKTVKCLQLANGA--VYYDEEKHWKEVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDL 81 ++ K Q+ ++ D K+ +++ I++ F+S L Sbjct: 949 LAEITKLRQICCDPNLIFDDYSGE-----SAKLDTCIDLVKSGIEAGHKILLFSQFSSML 1003 Query: 82 ARLQKAFPQGRT----------LDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNI 131 + K F + + DK + ++N + + G GLNL G +I Sbjct: 1004 DIISKRFEKEKITSFMITGSTPKDKRLTLVNKFNHDDTNVFLISLKAGGTGLNLT-GADI 1062 Query: 132 LVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQ 191 ++ + WW+ Q +R + G K V VY LIA+ TI+E +++ +K + Sbjct: 1063 VIHYDPWWNFAAQNQATDR-----AHRIGQKNTVTVYRLIAKGTIEERIVKLQESKKDLA 1117 Query: 192 DLLLN 196 D +LN Sbjct: 1118 DRVLN 1122 >gi|46449909|gb|AAS96558.1| Snf2 family protein [Desulfovibrio vulgaris str. Hildenborough] Length = 1055 Score = 155 bits (392), Expect = 3e-36, Method: Composition-based stats. Identities = 38/206 (18%), Positives = 76/206 (36%), Gaps = 21/206 (10%) Query: 5 HKFQRELYCDLQGENIEAF--NSASKTVKCLQLANGA--VYYDEEKHWKEVHDEKIKALE 60 K + ++ D+ + + + +K Q+ + D + K A + Sbjct: 836 RKLKEQVLADVDEKGLAKSQMSILDALLKLRQICCHPRLLKLDMPGFSTNLPSGKFDAFK 895 Query: 61 VIIEK--ANAAPIIVAYHFNSDLARLQK---------AFPQGRTLDKDPCTIQEWNEGKI 109 +I ++V F L ++ + G + D+ + N I Sbjct: 896 DMITDIVEEGHKVLVFSQFVQMLHIIRSWLQISGTPFCYLDGTSKDRFEQVDKFNNSPDI 955 Query: 110 PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYY 169 P+ + G GLNL + ++ + WW+ Q +R + G R VF Y Sbjct: 956 PIFLISLKAGGTGLNLT-SADYVIHYDPWWNPAVESQATDR-----THRIGQTRQVFSYK 1009 Query: 170 LIAQNTIDELVLQRLRTKSTIQDLLL 195 LI QNT++E +L+ K + + ++ Sbjct: 1010 LICQNTVEEKILKLQDMKRGVAEAII 1035 >gi|120602191|ref|YP_966591.1| SNF2-related protein [Desulfovibrio vulgaris DP4] gi|304569715|ref|YP_011298.2| Snf2 family protein [Desulfovibrio vulgaris str. Hildenborough] gi|120562420|gb|ABM28164.1| SNF2-related protein [Desulfovibrio vulgaris DP4] gi|311234232|gb|ADP87086.1| SNF2-related protein [Desulfovibrio vulgaris RCH1] Length = 1071 Score = 155 bits (391), Expect = 4e-36, Method: Composition-based stats. Identities = 38/206 (18%), Positives = 76/206 (36%), Gaps = 21/206 (10%) Query: 5 HKFQRELYCDLQGENIEAF--NSASKTVKCLQLANGA--VYYDEEKHWKEVHDEKIKALE 60 K + ++ D+ + + + +K Q+ + D + K A + Sbjct: 852 RKLKEQVLADVDEKGLAKSQMSILDALLKLRQICCHPRLLKLDMPGFSTNLPSGKFDAFK 911 Query: 61 VIIEK--ANAAPIIVAYHFNSDLARLQK---------AFPQGRTLDKDPCTIQEWNEGKI 109 +I ++V F L ++ + G + D+ + N I Sbjct: 912 DMITDIVEEGHKVLVFSQFVQMLHIIRSWLQISGTPFCYLDGTSKDRFEQVDKFNNSPDI 971 Query: 110 PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYY 169 P+ + G GLNL + ++ + WW+ Q +R + G R VF Y Sbjct: 972 PIFLISLKAGGTGLNLT-SADYVIHYDPWWNPAVESQATDR-----THRIGQTRQVFSYK 1025 Query: 170 LIAQNTIDELVLQRLRTKSTIQDLLL 195 LI QNT++E +L+ K + + ++ Sbjct: 1026 LICQNTVEEKILKLQDMKRGVAEAII 1051 >gi|160942559|ref|ZP_02089806.1| hypothetical protein FAEPRAM212_00034 [Faecalibacterium prausnitzii M21/2] gi|158446143|gb|EDP23146.1| hypothetical protein FAEPRAM212_00034 [Faecalibacterium prausnitzii M21/2] Length = 1098 Score = 155 bits (391), Expect = 5e-36, Method: Composition-based stats. Identities = 46/186 (24%), Positives = 85/186 (45%), Gaps = 21/186 (11%) Query: 9 RELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANA 68 RE+ CD + S++K CL+L AV H + + LE++ ++ + Sbjct: 910 REICCDPRLVADNWTGSSAKLDACLELVTEAV---AGGHRILLFSQFTSMLELLAKRLDE 966 Query: 69 APIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYG 128 A + HF LQ + P+ ++ +N+G+ + + G GLNL Sbjct: 967 AGV---SHFT-----LQGSTPKPV----RAEQVRRFNQGEADVFLISLRAGGTGLNLT-A 1013 Query: 129 GNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKS 188 +I++ + WW+L Q +R + G + V VY LIAQ+TI+E +++ + K Sbjct: 1014 ADIVIHYDPWWNLAAQNQATDR-----AYRIGQRNPVQVYRLIAQDTIEEKIVELQQAKQ 1068 Query: 189 TIQDLL 194 ++ D + Sbjct: 1069 SLADTV 1074 >gi|120555512|ref|YP_959863.1| SNF2-related protein [Marinobacter aquaeolei VT8] gi|120325361|gb|ABM19676.1| SNF2-related protein [Marinobacter aquaeolei VT8] Length = 1086 Score = 154 bits (390), Expect = 5e-36, Method: Composition-based stats. Identities = 43/201 (21%), Positives = 80/201 (39%), Gaps = 22/201 (10%) Query: 5 HKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIE 64 K R+L + +G +K Q+ + E+ K+ +L ++E Sbjct: 875 DKRIRKLLAE-KGAARSQIEILDALLKLRQICCHPALLNPEETA---GSAKLDSLMEMLE 930 Query: 65 KA--NAAPIIVAYHFNSDLARLQKAFP---------QGRTLDKDPCTIQEWNEGKIPLLF 113 + +I+ F S LA ++ G+T D+ ++ + G+ P+ Sbjct: 931 QLLDEGRKVIIFSQFTSMLALIETTLKAAGIGYEKLTGQTRDR-ATPVKRFQNGESPVFL 989 Query: 114 AHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQ 173 + G GLNL + ++ + WW+ QQ +R + G + VFVY LI + Sbjct: 990 ISLKAGGTGLNLT-AADCVIHYDPWWNPAAEQQATDRAW-----RIGQDKPVFVYRLITE 1043 Query: 174 NTIDELVLQRLRTKSTIQDLL 194 T++E + KS + D L Sbjct: 1044 GTVEERIQALQARKSQLADGL 1064 >gi|304310231|ref|YP_003809829.1| predicted helicase [gamma proteobacterium HdN1] gi|301795964|emb|CBL44165.1| predicted helicase [gamma proteobacterium HdN1] Length = 990 Score = 154 bits (390), Expect = 6e-36, Method: Composition-based stats. Identities = 41/196 (20%), Positives = 75/196 (38%), Gaps = 21/196 (10%) Query: 16 QGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIK----ALEVIIEKANAAPI 71 G + ++ QL + K + K+ LE ++E+ I Sbjct: 769 DGHETTRISILDALLRLRQLCCDPRLL-PLEDAKSLPSAKLDHLLVMLEELVEE--GRRI 825 Query: 72 IVAYHFNSDLARLQKAFPQGRT--------LDKDPCTIQEWNEGKIPLLFAHPASCGHGL 123 +V F S LA +++A Q + ++ + P+ + G GL Sbjct: 826 LVFSQFTSMLALIREALQQRKIPHLLLTGATQNRQALVERFQAENEPIFLISLKAGGVGL 885 Query: 124 NLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQR 183 NL + ++ F WW+ +Q +R + G + VFVY LI + TI+E ++ Sbjct: 886 NLT-AADTVIHFDPWWNPAAEEQATDR-----AYRIGQDKPVFVYKLICEGTIEEKIVLL 939 Query: 184 LRTKSTIQDLLLNALK 199 K +QD + A + Sbjct: 940 QERKRALQDAITGAAE 955 >gi|295103966|emb|CBL01510.1| Superfamily II DNA/RNA helicases, SNF2 family [Faecalibacterium prausnitzii SL3/3] Length = 1098 Score = 154 bits (390), Expect = 6e-36, Method: Composition-based stats. Identities = 46/186 (24%), Positives = 85/186 (45%), Gaps = 21/186 (11%) Query: 9 RELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANA 68 RE+ CD + S++K CL+L AV H + + LE++ ++ + Sbjct: 910 REICCDPRLVADNWTGSSAKLEACLELVTEAV---AGGHRILLFSQFTSMLELLAKRLDE 966 Query: 69 APIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYG 128 A + HF LQ + P+ ++ +N+G+ + + G GLNL Sbjct: 967 AGV---SHFT-----LQGSTPKPV----RAEQVRRFNQGEADVFLISLRAGGTGLNLT-A 1013 Query: 129 GNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKS 188 +I++ + WW+L Q +R + G + V VY LIAQ+TI+E +++ + K Sbjct: 1014 ADIVIHYDPWWNLAAQNQATDR-----AYRIGQRNPVQVYRLIAQDTIEEKIVELQQAKQ 1068 Query: 189 TIQDLL 194 ++ D + Sbjct: 1069 SLADTV 1074 >gi|212702386|ref|ZP_03310514.1| hypothetical protein DESPIG_00400 [Desulfovibrio piger ATCC 29098] gi|212674185|gb|EEB34668.1| hypothetical protein DESPIG_00400 [Desulfovibrio piger ATCC 29098] Length = 1085 Score = 154 bits (389), Expect = 7e-36, Method: Composition-based stats. Identities = 37/206 (17%), Positives = 78/206 (37%), Gaps = 21/206 (10%) Query: 5 HKFQRELYCDLQGENIEAF--NSASKTVKCLQLANGA--VYYDEEKHWKEVHDEKIKALE 60 K + ++ D+ + + + +K Q+ + D + K A + Sbjct: 866 RKLRAQVLADVDEKGLAKSQMSILDALLKLRQICCHPRLLKIDLPGFSNNLPSGKFDAFK 925 Query: 61 VIIEK--ANAAPIIVAYHFNSDLARLQK---------AFPQGRTLDKDPCTIQEWNEGKI 109 ++ + ++V F L +++ + G + D+ + N I Sbjct: 926 DMVMEIVEGGHKVLVFSQFVQMLQIIRQWLEFSQIPFCYLDGASKDRFEQVDRFNNSPDI 985 Query: 110 PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYY 169 P+ + G GLNL + ++ + WW+ Q +R + G R VF Y Sbjct: 986 PIFLISLKAGGTGLNLT-SADYVIHYDPWWNPAVESQATDR-----THRIGQTRQVFSYK 1039 Query: 170 LIAQNTIDELVLQRLRTKSTIQDLLL 195 LI QNT++E +L+ K + + ++ Sbjct: 1040 LICQNTVEEKILKLQEAKRGVAEAII 1065 >gi|78356607|ref|YP_388056.1| DEAD/DEAH box helicase-like [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] gi|78219012|gb|ABB38361.1| DEAD/DEAH box helicase-like protein [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] Length = 1068 Score = 154 bits (389), Expect = 7e-36, Method: Composition-based stats. Identities = 38/206 (18%), Positives = 76/206 (36%), Gaps = 21/206 (10%) Query: 5 HKFQRELYCDLQGENIEAF--NSASKTVKCLQLANGA--VYYDEEKHWKEVHDEKIKALE 60 K + ++ D+ + I + +K Q+ + D + K A + Sbjct: 849 KKLKDQVMADVDEKGIAKSQMSILDALLKLRQICCHPRLLKLDMPGLTTNLPSGKFDAFK 908 Query: 61 VIIEK--ANAAPIIVAYHFNSDLARLQK---------AFPQGRTLDKDPCTIQEWNEGKI 109 +I ++V F L ++ + G + D+ + + I Sbjct: 909 DMITDIVEEGHKVLVFSQFVQMLHIIRSWLQINDMPFCYLDGTSKDRFDQVDRFNDSPDI 968 Query: 110 PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYY 169 P+ + G GLNL + ++ + WW+ Q +R + G K VF Y Sbjct: 969 PIFLISLKAGGTGLNLT-SADYVIHYDPWWNPAVENQATDR-----AHRIGQKNQVFAYK 1022 Query: 170 LIAQNTIDELVLQRLRTKSTIQDLLL 195 +I QNT++E +L+ K + D ++ Sbjct: 1023 MICQNTVEEKILKLQDMKRGVADAII 1048 >gi|218885893|ref|YP_002435214.1| DEAD/DEAH box helicase [Desulfovibrio vulgaris str. 'Miyazaki F'] gi|218756847|gb|ACL07746.1| Non-specific serine/threonine protein kinase [Desulfovibrio vulgaris str. 'Miyazaki F'] Length = 1069 Score = 153 bits (387), Expect = 1e-35, Method: Composition-based stats. Identities = 38/206 (18%), Positives = 77/206 (37%), Gaps = 21/206 (10%) Query: 5 HKFQRELYCDLQGENIEAF--NSASKTVKCLQLANGA--VYYDEEKHWKEVHDEKIKALE 60 K + ++ D+ + I + +K Q+ + D + K A + Sbjct: 850 RKLKEQVMADVDEKGIAKSQMSILDALLKLRQICCHPRLLKLDMPGLTTNLPSGKFDAFK 909 Query: 61 VIIEK--ANAAPIIVAYHFNSDLARLQK---------AFPQGRTLDKDPCTIQEWNEGKI 109 +I ++V F L ++ + G + D+ + N +I Sbjct: 910 DMITDIVEEGHKVLVFSQFVQMLHIIRSWLQINAIPFCYLDGTSKDRFDQVDRFNNTPEI 969 Query: 110 PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYY 169 P+ + G GLNL + ++ + WW+ Q +R + G R VF Y Sbjct: 970 PIFLISLKAGGTGLNLT-SADYVIHYDPWWNPAVESQATDR-----THRIGQTRQVFSYK 1023 Query: 170 LIAQNTIDELVLQRLRTKSTIQDLLL 195 LI +NT++E +L+ K + + ++ Sbjct: 1024 LICENTVEEKILKLQDMKRGVAEAII 1049 >gi|227015822|gb|ACP17919.1| putative non-specific serine/threonine protein kinase [Pseudomonas nitroreducens] Length = 1093 Score = 153 bits (387), Expect = 1e-35, Method: Composition-based stats. Identities = 43/188 (22%), Positives = 80/188 (42%), Gaps = 20/188 (10%) Query: 29 TVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQ- 85 +K Q+ + H K+ AL ++++ A +++ F S LA +Q Sbjct: 900 LLKLRQVCCDPRLLQPD--LPATHSGKLSALLEMLDELLAEGRRVLLFSQFTSMLALIQA 957 Query: 86 --------KAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSL 137 A G T D+ + ++ +G++PL + G GLNL + ++ + Sbjct: 958 QLQARNIPYALLTGETRDRR-QPVDDFQQGRVPLFLISLKAGGTGLNLTT-ADTVIHYDP 1015 Query: 138 WWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 WW+ QQ +R + G + VFVY LIA+ T++E + Q K+ + +L Sbjct: 1016 WWNPAVEQQATDR-----AYRIGQDKPVFVYKLIARGTLEEKIQQLQARKAALAAGVLED 1070 Query: 198 LKKETIHV 205 K + + Sbjct: 1071 GKNTGLQL 1078 >gi|139438973|ref|ZP_01772433.1| Hypothetical protein COLAER_01439 [Collinsella aerofaciens ATCC 25986] gi|133775684|gb|EBA39504.1| Hypothetical protein COLAER_01439 [Collinsella aerofaciens ATCC 25986] Length = 1173 Score = 153 bits (386), Expect = 2e-35, Method: Composition-based stats. Identities = 33/196 (16%), Positives = 78/196 (39%), Gaps = 21/196 (10%) Query: 14 DLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKA--NAAPI 71 ++ + ++ K Q+ + E+ + K+ A ++ A I Sbjct: 965 EVSEFKKDKLKVLAELTKLRQICCDPHLHYED---YKAGSAKLDACMELVHGALDGGHHI 1021 Query: 72 IVAYHFNSDLARLQKAFPQ----------GRTLDKDPCTIQEWNEGKIPLLFAHPASCGH 121 ++ F L + K + + + + ++ G++P+ + G Sbjct: 1022 LLFSQFTGMLDIIGKRLAKEDIGFLKLTGASSKESRAKMVAQFQAGEVPVFLISLKAGGV 1081 Query: 122 GLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVL 181 GLNL ++++ + WW++ Q +R + G + V VY LIA++TI+E ++ Sbjct: 1082 GLNLT-AADVVIHYDPWWNVAAQDQATDR-----AHRIGQQHTVTVYKLIAKDTIEERIM 1135 Query: 182 QRLRTKSTIQDLLLNA 197 + +K + + +L Sbjct: 1136 RMQESKRDLVNSVLGG 1151 >gi|258405011|ref|YP_003197753.1| SNF2-like protein [Desulfohalobium retbaense DSM 5692] gi|257797238|gb|ACV68175.1| SNF2-related protein [Desulfohalobium retbaense DSM 5692] Length = 1068 Score = 152 bits (385), Expect = 2e-35, Method: Composition-based stats. Identities = 38/214 (17%), Positives = 80/214 (37%), Gaps = 25/214 (11%) Query: 1 MKQY----HKFQRELYCDLQGENIEAF--NSASKTVKCLQLANGA--VYYDEEKHWKEVH 52 M+ Y K + ++ D+ + I + +K Q+ + D + Sbjct: 841 MELYASLAKKLKEQVLRDVDEKGIAKSQMSILDALLKLRQICCHPRLLKLDMPGVSTNLP 900 Query: 53 DEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQK---------AFPQGRTLDKDPCTI 101 K + + ++ + ++V F L ++ A+ G + D+ Sbjct: 901 SGKFETFKDLVTGIIDDGHKVLVFSQFVQMLHIIRSWLSMNKVPFAYLDGTSKDRFEQVE 960 Query: 102 QEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGF 161 N IP+ + G GLNL + ++ + WW+ Q +R + G Sbjct: 961 NFNNNPDIPIFLISLKAGGTGLNLT-SADYVIHYDPWWNPAVEDQATDR-----THRIGQ 1014 Query: 162 KRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 + VF Y LI +NT++E +L+ K + + ++ Sbjct: 1015 TKKVFSYKLICENTVEEKILKLQEQKKGVAEAII 1048 >gi|220904807|ref|YP_002480119.1| Non-specific serine/threonine protein kinase [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774] gi|219869106|gb|ACL49441.1| Non-specific serine/threonine protein kinase [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774] Length = 1091 Score = 152 bits (385), Expect = 2e-35, Method: Composition-based stats. Identities = 38/206 (18%), Positives = 78/206 (37%), Gaps = 21/206 (10%) Query: 5 HKFQRELYCDLQGENIEAF--NSASKTVKCLQLANGA--VYYDEEKHWKEVHDEKIKALE 60 K + ++ D+ + + + +K Q+ + D + K A + Sbjct: 872 RKLRAQVLADVDQKGLAKSQMSILDALLKLRQICCHPRLLKIDIPGFTTNLPSGKFDAFK 931 Query: 61 VIIEK--ANAAPIIVAYHFNSDLARLQK---------AFPQGRTLDKDPCTIQEWNEGKI 109 +I + ++V F L +++ + G + D+ + N I Sbjct: 932 DMIMEIVEGGHKVLVFSQFVQMLQIIKQWLEFSQVPFCYLDGASKDRFDQVDRFNNSPDI 991 Query: 110 PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYY 169 P+ + G GLNL + ++ + WW+ Q +R + G R VF Y Sbjct: 992 PIFLISLKAGGTGLNLT-SADYVIHYDPWWNPAVESQATDR-----THRIGQTRQVFSYK 1045 Query: 170 LIAQNTIDELVLQRLRTKSTIQDLLL 195 LI QNT++E +L+ K + + ++ Sbjct: 1046 LICQNTVEEKILKLQEAKRGVAEAII 1071 >gi|88857230|ref|ZP_01131873.1| putative DNA helicase with SNF2 domain [Pseudoalteromonas tunicata D2] gi|88820427|gb|EAR30239.1| putative DNA helicase with SNF2 domain [Pseudoalteromonas tunicata D2] Length = 1060 Score = 152 bits (384), Expect = 3e-35, Method: Composition-based stats. Identities = 47/218 (21%), Positives = 89/218 (40%), Gaps = 25/218 (11%) Query: 2 KQYHKFQRELYCDLQG----ENIEAFNSASK--TVKCLQLANGA-VYYDEEKHWKEVHDE 54 K Y + ++++ L+ I+ A +K Q+ + DE + Sbjct: 836 KCYGEIRQKMEFKLKDLFAEIGIDKSRLAFLEALLKLRQICCSPQLLSDEGLQFSFADST 895 Query: 55 KIKALEVIIEKA--NAAPIIVAYHFNSDLARLQK---------AFPQGRTLDKDPCTIQE 103 K+ L + +I+ F S L+ +++ A G+T D+ + Sbjct: 896 KLDWLAKHLPAMLQQGRKVIIFSQFTSMLSLIEQQLQALNLGYAILTGQTRDRQSA-VDS 954 Query: 104 WNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKR 163 + +G + + G GLNL + ++ F WW+ QQ +R + G K+ Sbjct: 955 FQQGDKSIFLISLKAGGTGLNLT-AADTVIHFDPWWNPAVEQQATDR-----AYRIGQKK 1008 Query: 164 AVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 VFVY LI Q+TI+E V + + K+ + + +A K+ Sbjct: 1009 PVFVYKLICQDTIEERVYEMQQNKAALAESFFDAASKQ 1046 >gi|198283188|ref|YP_002219509.1| Non-specific serine/threonine protein kinase [Acidithiobacillus ferrooxidans ATCC 53993] gi|218667367|ref|YP_002425417.1| DNA helicase, SNF2/RAD54 family [Acidithiobacillus ferrooxidans ATCC 23270] gi|198247709|gb|ACH83302.1| Non-specific serine/threonine protein kinase [Acidithiobacillus ferrooxidans ATCC 53993] gi|218519580|gb|ACK80166.1| DNA helicase, SNF2/RAD54 family [Acidithiobacillus ferrooxidans ATCC 23270] Length = 1113 Score = 152 bits (384), Expect = 3e-35, Method: Composition-based stats. Identities = 45/186 (24%), Positives = 74/186 (39%), Gaps = 18/186 (9%) Query: 29 TVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQK 86 +K Q+ EK K K+ L +I + A I++ F LA + Sbjct: 916 MLKLRQVCCDPRLLKSEKARKVQDSAKLALLMEMIPELLAEGRQILLFSQFTEMLALISA 975 Query: 87 AFPQ---------GRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSL 137 + G T D+ I + G++PL + G GLNL + ++ + Sbjct: 976 RLDKMHIPYVLLTGSTQDR-KTPIDRFQRGEVPLFLISLKAGGVGLNLT-AADTVIHYDP 1033 Query: 138 WWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 WW+ Q +R + G KR VFVY LI +I+E +L K+ + +L Sbjct: 1034 WWNPAAENQATDR-----AHRIGQKRQVFVYKLIVAGSIEEKILALQEKKAILAAGVLEK 1088 Query: 198 LKKETI 203 +KE + Sbjct: 1089 TQKEKL 1094 >gi|313902711|ref|ZP_07836109.1| SNF2-related protein [Thermaerobacter subterraneus DSM 13965] gi|313467008|gb|EFR62524.1| SNF2-related protein [Thermaerobacter subterraneus DSM 13965] Length = 1191 Score = 152 bits (384), Expect = 3e-35, Method: Composition-based stats. Identities = 39/212 (18%), Positives = 75/212 (35%), Gaps = 23/212 (10%) Query: 2 KQYHKF----QRELYCDLQGENI--EAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEK 55 K Y + + + ++ I ++ Q D ++ K Sbjct: 967 KLYRELLAAYRARVLAEVDRAGIARSRMTILEALLRLRQACCHPALLDLPG-YRNAGSAK 1025 Query: 56 IKALEVIIE--KANAAPIIVAYHFNSDLARLQKAFPQ--------GRTLDKDPCTIQEWN 105 ++A ++ ++V F S L LQ+ + + ++ + Sbjct: 1026 LEAFRDLVHHVAGGGGKVLVFSQFTSMLDILQRELDRLGLGWERLDGRVRNREERVRRFQ 1085 Query: 106 EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 EG +P+ + G GLNL + ++ + WW+ +Q R + G R V Sbjct: 1086 EGDVPVFLISLKAGGTGLNLT-AASYVIHYDPWWNPAAEEQATGR-----AHRIGQDRPV 1139 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 F Y LI + T++E +LQ K + LL Sbjct: 1140 FSYKLITRGTVEEKILQLQEQKRALAGALLAG 1171 >gi|313112827|ref|ZP_07798474.1| protein, SNF2 family [Faecalibacterium cf. prausnitzii KLE1255] gi|310624897|gb|EFQ08205.1| protein, SNF2 family [Faecalibacterium cf. prausnitzii KLE1255] Length = 1100 Score = 151 bits (382), Expect = 5e-35, Method: Composition-based stats. Identities = 43/186 (23%), Positives = 83/186 (44%), Gaps = 21/186 (11%) Query: 9 RELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANA 68 RE+ CD + ++K C++L AV E H + + LE++ ++ + Sbjct: 913 REICCDPRLVADNWDGGSAKLDACMELVTAAV---EGGHRILLFSQFTSMLELLAKRLDE 969 Query: 69 APIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYG 128 A + HF LQ + P+ ++ +N G+ + + G GLNL Sbjct: 970 AGV---SHFT-----LQGSTPKPV----RAELVRRFNSGEADVFLISLRAGGTGLNLT-A 1016 Query: 129 GNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKS 188 +I++ + WW++ Q +R + G + V VY LIAQ+TI+E +++ + K Sbjct: 1017 ADIVIHYDPWWNVAAQNQATDR-----AYRIGQRNPVQVYKLIAQDTIEEKIVELQQAKQ 1071 Query: 189 TIQDLL 194 + + + Sbjct: 1072 DLAETV 1077 >gi|146292471|ref|YP_001182895.1| SNF2-like protein [Shewanella putrefaciens CN-32] gi|145564161|gb|ABP75096.1| SNF2-related protein [Shewanella putrefaciens CN-32] Length = 1073 Score = 151 bits (382), Expect = 5e-35, Method: Composition-based stats. Identities = 42/204 (20%), Positives = 81/204 (39%), Gaps = 19/204 (9%) Query: 5 HKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIE 64 K R+L+ + QG N +K Q E+ K ++ K+ L+ + Sbjct: 860 EKKLRDLFAN-QGVNSSHIEFLDALLKLRQACCDPRLVKLEQAQKVKNNAKLDWLKQNLP 918 Query: 65 KA--NAAPIIVAYHFNSDLARLQKAF---------PQGRTLDKDPCTIQEWNEGKIPLLF 113 + +++ F S L ++ G+T + I + +G P+ Sbjct: 919 EMVQEGRKVLIFSQFTSMLTLIEAELQSLNIDYSKLTGQTRWRQAQ-IDRFQDGDTPVFL 977 Query: 114 AHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQ 173 + G GLNL + ++ + WW+ +Q +R + G + VFVY LIA+ Sbjct: 978 ISLKAGGTGLNLT-AADTVIHYDPWWNPAAEKQATDR-----AHRIGQDKPVFVYKLIAE 1031 Query: 174 NTIDELVLQRLRTKSTIQDLLLNA 197 T++E + + + K + D +L Sbjct: 1032 GTVEEKIQEMQQHKQNLADSILEG 1055 >gi|291520743|emb|CBK79036.1| Superfamily II DNA/RNA helicases, SNF2 family [Coprococcus catus GD/7] Length = 1096 Score = 151 bits (382), Expect = 5e-35, Method: Composition-based stats. Identities = 45/206 (21%), Positives = 79/206 (38%), Gaps = 26/206 (12%) Query: 6 KFQRELYCDLQGE-NIEAFNSASKTVKCLQLANGA--VYYDEEKHWKEVHDEKIKALEVI 62 + Q+EL ++ K QL +Y + K+ + Sbjct: 883 QLQKELESQNDSMFKASKIQILAELTKLRQLCCDPALIYKN-----YHGGSAKLDTCIQL 937 Query: 63 IE--KANAAPIIVAYHFNSDLARLQKAFP---------QGRTLDKDPC-TIQEWNEGKIP 110 I+ +A I++ F S L ++ G T + + +NE IP Sbjct: 938 IQNARAGGHKILLFSQFTSMLDIIEHRLKLEHILYYRLDGSTKSEQRTRLVNAFNENAIP 997 Query: 111 LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYL 170 + + G GLNL G +I++ + WW+ Q +R + G V VY L Sbjct: 998 VFLISLKAGGTGLNLT-GADIVIHYDPWWNAAAQNQATDR-----AHRIGQTHTVTVYKL 1051 Query: 171 IAQNTIDELVLQRLRTKSTIQDLLLN 196 IA++TI+E +L+ K + D +L+ Sbjct: 1052 IARHTIEEKILELQENKKALSDQILS 1077 >gi|240145145|ref|ZP_04743746.1| superfamily II DNA/RNA helicase, SNF2 family [Roseburia intestinalis L1-82] gi|257202823|gb|EEV01108.1| superfamily II DNA/RNA helicase, SNF2 family [Roseburia intestinalis L1-82] gi|291537657|emb|CBL10769.1| Superfamily II DNA/RNA helicases, SNF2 family [Roseburia intestinalis M50/1] gi|291537792|emb|CBL10903.1| Superfamily II DNA/RNA helicases, SNF2 family [Roseburia intestinalis XB6B4] Length = 1099 Score = 151 bits (382), Expect = 5e-35, Method: Composition-based stats. Identities = 43/216 (19%), Positives = 78/216 (36%), Gaps = 30/216 (13%) Query: 1 MKQYHKFQ---RELYCDLQGENIEA--FNSASKTVKCLQLAN--GAVYYDEEKHWKEVHD 53 M+ Y + +E+ + S+ K QL G + D Sbjct: 877 MQLYDAYATRMKEMLSQQNEKEFHKGRMQILSELTKLRQLCCDPGLLLEDYHGE-----S 931 Query: 54 EKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQKAFPQGRT----------LDKDPCTI 101 K +I A I++ F S L RL + + +K + Sbjct: 932 AKTDMCMELIVNAVGAGHKILLFSQFTSMLDRLTERLKKEGIDYYLLTGSVNKEKRMQMV 991 Query: 102 QEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGF 161 + +N +P+ + G GLNL +I++ + WW++ Q +R + G Sbjct: 992 ESFNNDDVPVFCISLKAGGTGLNLT-SADIVIHYDPWWNVAVQNQATDR-----AHRIGQ 1045 Query: 162 KRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 K V VY L+A+ TI+E ++ K + + +L Sbjct: 1046 KHVVTVYKLVAEGTIEEKIIDIQERKKKLAEQVLEG 1081 >gi|319425773|gb|ADV53847.1| SNF2-related protein [Shewanella putrefaciens 200] Length = 1073 Score = 151 bits (381), Expect = 6e-35, Method: Composition-based stats. Identities = 42/204 (20%), Positives = 81/204 (39%), Gaps = 19/204 (9%) Query: 5 HKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIE 64 K R+L+ + QG N +K Q E+ K ++ K+ L+ + Sbjct: 860 EKKLRDLFAN-QGVNSSHIEFLDALLKLRQACCDPRLVKLEQAQKVKNNAKLDWLKQNLP 918 Query: 65 KA--NAAPIIVAYHFNSDLARLQKAF---------PQGRTLDKDPCTIQEWNEGKIPLLF 113 + +++ F S L ++ G+T + I + +G P+ Sbjct: 919 EMVQEGRKVLIFSQFTSMLTLIEAELQSLNIDYSKLTGQTRWRQAQ-IDRFQDGDTPVFL 977 Query: 114 AHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQ 173 + G GLNL + ++ + WW+ +Q +R + G + VFVY LIA+ Sbjct: 978 ISLKAGGTGLNLT-AADTVIHYDPWWNPAAEKQATDR-----AHRIGQDKPVFVYKLIAE 1031 Query: 174 NTIDELVLQRLRTKSTIQDLLLNA 197 T++E + + + K + D +L Sbjct: 1032 GTVEEKIQEMQQHKQNLADSILEG 1055 >gi|120599532|ref|YP_964106.1| SNF2-like protein [Shewanella sp. W3-18-1] gi|120559625|gb|ABM25552.1| SNF2-related protein [Shewanella sp. W3-18-1] Length = 1073 Score = 151 bits (381), Expect = 6e-35, Method: Composition-based stats. Identities = 42/204 (20%), Positives = 81/204 (39%), Gaps = 19/204 (9%) Query: 5 HKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIE 64 K R+L+ + QG N +K Q E+ K ++ K+ L+ + Sbjct: 860 EKKLRDLFAN-QGVNSSHIEFLDALLKLRQACCDPRLVKLEQAQKVKNNAKLDWLKQNLP 918 Query: 65 KA--NAAPIIVAYHFNSDLARLQKAF---------PQGRTLDKDPCTIQEWNEGKIPLLF 113 + +++ F S L ++ G+T + I + +G P+ Sbjct: 919 EMVQEGRKVLIFSQFTSMLTLIEAELQSLNIDYSKLTGQTRWRQAQ-IDRFQDGDTPVFL 977 Query: 114 AHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQ 173 + G GLNL + ++ + WW+ +Q +R + G + VFVY LIA+ Sbjct: 978 ISLKAGGTGLNLT-AADTVIHYDPWWNPAAEKQATDR-----AHRIGQDKPVFVYKLIAE 1031 Query: 174 NTIDELVLQRLRTKSTIQDLLLNA 197 T++E + + + K + D +L Sbjct: 1032 GTVEEKIQEMQQHKQNLADSILEG 1055 >gi|303327511|ref|ZP_07357952.1| Snf2 family protein [Desulfovibrio sp. 3_1_syn3] gi|302862451|gb|EFL85384.1| Snf2 family protein [Desulfovibrio sp. 3_1_syn3] Length = 1085 Score = 151 bits (381), Expect = 6e-35, Method: Composition-based stats. Identities = 37/206 (17%), Positives = 78/206 (37%), Gaps = 21/206 (10%) Query: 5 HKFQRELYCDLQGENIEAF--NSASKTVKCLQLANGA--VYYDEEKHWKEVHDEKIKALE 60 K + ++ D+ + + + +K Q+ + D + K A + Sbjct: 866 RKLRAQVLADVDQKGLAKSQMSILDALLKLRQICCHPRLLKMDLPGFSNNLPSGKFDAFK 925 Query: 61 VIIEK--ANAAPIIVAYHFNSDLARLQK---------AFPQGRTLDKDPCTIQEWNEGKI 109 ++ + ++V F L +++ + G + D+ + N I Sbjct: 926 DMVLEIVEGGHKVLVFSQFVQMLQIIKQWLEFSQVPFCYLDGASKDRFDQVDRFNNSPDI 985 Query: 110 PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYY 169 P+ + G GLNL + ++ + WW+ Q +R + G R VF Y Sbjct: 986 PIFLISLKAGGTGLNLT-SADYVIHYDPWWNPAVESQATDR-----THRIGQTRQVFSYK 1039 Query: 170 LIAQNTIDELVLQRLRTKSTIQDLLL 195 LI QNT++E +L+ K + + ++ Sbjct: 1040 LICQNTVEEKILKLQEAKRGVAEAII 1065 >gi|295102130|emb|CBK99675.1| Superfamily II DNA/RNA helicases, SNF2 family [Faecalibacterium prausnitzii L2-6] Length = 1109 Score = 151 bits (381), Expect = 6e-35, Method: Composition-based stats. Identities = 45/186 (24%), Positives = 85/186 (45%), Gaps = 21/186 (11%) Query: 9 RELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANA 68 RE+ CD + ++K C +L + AV E H + + LE++ ++ +A Sbjct: 920 REICCDPRLIADNWEGGSAKLDACAELVSSAV---EGGHRILLFSQFTSMLELLAKRLDA 976 Query: 69 APIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYG 128 I HF LQ + P+ ++ +N G++ + + G GLNL Sbjct: 977 EGI---SHFT-----LQGSTPKPV----RAELVRRFNGGEVSVFLISLRAGGTGLNLT-A 1023 Query: 129 GNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKS 188 +I++ + WW++ Q +R + G + V VY LIAQ+TI+E +++ + K Sbjct: 1024 ADIVIHYDPWWNVAAQNQATDR-----AYRIGQQNPVQVYKLIAQDTIEEKIVELQQAKQ 1078 Query: 189 TIQDLL 194 ++ D + Sbjct: 1079 SLADTV 1084 >gi|257064183|ref|YP_003143855.1| DNA/RNA helicase, superfamily II, SNF2 family [Slackia heliotrinireducens DSM 20476] gi|256791836|gb|ACV22506.1| DNA/RNA helicase, superfamily II, SNF2 family [Slackia heliotrinireducens DSM 20476] Length = 1082 Score = 151 bits (381), Expect = 7e-35, Method: Composition-based stats. Identities = 35/220 (15%), Positives = 79/220 (35%), Gaps = 25/220 (11%) Query: 2 KQYHKFQRELYCDLQGENIE----AFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIK 57 + + + R+ E+++ ++ + Q+ + K+ Sbjct: 861 RAHEQMLRQKIASQTDEDMKDGTQKIEVLAELMHLRQICCDPHLMTSRYN---GPAAKLD 917 Query: 58 ALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTLD----------KDPCTIQEWN 105 AL +I ++V F S L + + R K ++ +N Sbjct: 918 ALSDLIGSCMDAGQKMLVFSQFKSFLDIIADRLDEQRIAHFAITGDTPSAKRLELVERFN 977 Query: 106 EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 P+ + G GLNL G ++++ WW+ Q +R + G V Sbjct: 978 ADDTPVFLISLKAGGTGLNLT-GASVVIHADPWWNAAAQNQATDR-----AHRIGQTHVV 1031 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIHV 205 V+ +IA++TI+E ++ K + + ++ A + ++ Sbjct: 1032 SVHKIIAKDTIEERIMALQDAKRDLAEQIIGATEGSSLAT 1071 >gi|152999998|ref|YP_001365679.1| non-specific serine/threonine protein kinase [Shewanella baltica OS185] gi|151364616|gb|ABS07616.1| Non-specific serine/threonine protein kinase [Shewanella baltica OS185] Length = 1073 Score = 150 bits (380), Expect = 7e-35, Method: Composition-based stats. Identities = 45/209 (21%), Positives = 83/209 (39%), Gaps = 19/209 (9%) Query: 5 HKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIE 64 K R+L+ QG +K Q E+ K + K+ L+ + Sbjct: 860 EKKLRDLFAT-QGVGSSHIEFLDALLKLRQACCDPRLVKLEQAQKVKSNAKLDWLKQNLP 918 Query: 65 KA--NAAPIIVAYHFNSDLARLQKAFPQ---------GRTLDKDPCTIQEWNEGKIPLLF 113 + I++ F S L+ ++ G+T + I ++ EG P+ Sbjct: 919 EMVQEGRKILIFSQFTSMLSLIEAELVDLGLDYSKLTGQTRLRQAQ-IDKFQEGDTPVFL 977 Query: 114 AHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQ 173 + G GLNL + ++ + WW+ +Q +R + G + VFVY LIA+ Sbjct: 978 ISLKAGGTGLNLT-AADTVIHYDPWWNPAAEKQATDR-----AHRIGQDKPVFVYKLIAE 1031 Query: 174 NTIDELVLQRLRTKSTIQDLLLNALKKET 202 T++E + + + K ++ D +L K T Sbjct: 1032 GTVEEKIQEMQQHKQSLADSILEGKGKGT 1060 >gi|256828244|ref|YP_003156972.1| Non-specific serine/threonine protein kinase [Desulfomicrobium baculatum DSM 4028] gi|256577420|gb|ACU88556.1| Non-specific serine/threonine protein kinase [Desulfomicrobium baculatum DSM 4028] Length = 1068 Score = 150 bits (380), Expect = 7e-35, Method: Composition-based stats. Identities = 38/206 (18%), Positives = 80/206 (38%), Gaps = 21/206 (10%) Query: 5 HKFQRELYCDLQGENI--EAFNSASKTVKCLQLANGA--VYYDEEKHWKEVHDEKIKALE 60 K + ++ D+ + I + +K Q+ + D + K +A + Sbjct: 849 KKLKEQVLQDVDEKGIGQSQISILDALLKLRQICCHPRLLKLDMPGFNANLSSGKFEAFK 908 Query: 61 VIIEK--ANAAPIIVAYHFNSDLARLQK---------AFPQGRTLDKDPCTIQEWNEGKI 109 ++ + ++V F L ++ + G + D+ + N +I Sbjct: 909 DLVTTIIDDGHKVLVFSQFVQMLHIIRNWLHMVEIPFCYLDGTSKDRFEQVDKFNNTPEI 968 Query: 110 PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYY 169 P+ + G GLNL + ++ + WW+ Q +R + G R VF Y Sbjct: 969 PIFLISLKAGGTGLNLT-SADYVIHYDPWWNPAVEDQATDR-----THRIGQTRQVFAYK 1022 Query: 170 LIAQNTIDELVLQRLRTKSTIQDLLL 195 +I +NT++E +L+ +K I D ++ Sbjct: 1023 MICENTVEEKILKLQESKKGIADSII 1048 >gi|146282998|ref|YP_001173151.1| helicase/SNF2 domain-containing protein [Pseudomonas stutzeri A1501] gi|145571203|gb|ABP80309.1| helicase/SNF2 family domain protein [Pseudomonas stutzeri A1501] Length = 773 Score = 150 bits (380), Expect = 7e-35, Method: Composition-based stats. Identities = 34/181 (18%), Positives = 74/181 (40%), Gaps = 18/181 (9%) Query: 29 TVKCLQLANGA--VYYDEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARL 84 +K Q+ + D + K+ +L ++++ + +++ F S LA + Sbjct: 578 LLKLRQVCCDLRLLKGDAVATSRGSSSGKLDSLLDMLDELMSEGRRVLLFSQFTSMLALI 637 Query: 85 QKAFPQ--------GRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFS 136 ++A + D ++ + G++PL + G GLNL + ++ + Sbjct: 638 EQALLKRGITYVKLTGETDDRRTPVERFQAGEVPLFLISLKAGGTGLNLT-AADTVIHYD 696 Query: 137 LWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 WW+ Q +R + G + VFVY LI + T++E + + K+ + +L Sbjct: 697 PWWNPAAENQATDR-----AYRIGQDKPVFVYRLITRGTVEERIRELQARKAELAAGVLE 751 Query: 197 A 197 Sbjct: 752 G 752 >gi|327481349|gb|AEA84659.1| helicase/SNF2 domain-containing protein [Pseudomonas stutzeri DSM 4166] Length = 773 Score = 150 bits (380), Expect = 8e-35, Method: Composition-based stats. Identities = 34/181 (18%), Positives = 74/181 (40%), Gaps = 18/181 (9%) Query: 29 TVKCLQLANGA--VYYDEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARL 84 +K Q+ + D + K+ +L ++++ + +++ F S LA + Sbjct: 578 LLKLRQVCCDLRLLKGDAVATSRGSSSGKLDSLLDMLDELMSEGRRVLLFSQFTSMLALI 637 Query: 85 QKAFPQ--------GRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFS 136 ++A + D ++ + G++PL + G GLNL + ++ + Sbjct: 638 EQALLKRGITYVKLTGETDDRRTPVERFQAGEVPLFLISLKAGGTGLNLT-AADTVIHYD 696 Query: 137 LWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 WW+ Q +R + G + VFVY LI + T++E + + K+ + +L Sbjct: 697 PWWNPAAENQATDR-----AYRIGQDKPVFVYRLITRGTVEERIRELQARKAELAAGVLE 751 Query: 197 A 197 Sbjct: 752 G 752 >gi|317122409|ref|YP_004102412.1| SNF2-related protein [Thermaerobacter marianensis DSM 12885] gi|315592389|gb|ADU51685.1| SNF2-related protein [Thermaerobacter marianensis DSM 12885] Length = 1191 Score = 150 bits (380), Expect = 8e-35, Method: Composition-based stats. Identities = 39/212 (18%), Positives = 75/212 (35%), Gaps = 23/212 (10%) Query: 2 KQYHKF----QRELYCDLQGENI--EAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEK 55 K Y + + + ++ I ++ Q D ++ K Sbjct: 967 KLYRELLAAYRARVLAEVDRAGIARSRMTILEALLRLRQACCHPALLDLPG-YRNAGSAK 1025 Query: 56 IKALEVIIE--KANAAPIIVAYHFNSDLARLQKAFPQ--------GRTLDKDPCTIQEWN 105 ++A ++ ++V F S L LQ+ + + ++ + Sbjct: 1026 LEAFRELVHHVAGGGGKVLVFSQFTSMLDILQRELDRLGLGWERLDGRVRNREERVRRFQ 1085 Query: 106 EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 EG +P+ + G GLNL + ++ + WW+ +Q R + G R V Sbjct: 1086 EGDVPVFLISLKAGGTGLNLT-AASYVIHYDPWWNPAVEEQATGR-----AHRIGQDRPV 1139 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 F Y LI + T++E +LQ K + LL Sbjct: 1140 FSYKLITRGTVEEKILQLQEQKRALAGALLAG 1171 >gi|253580974|ref|ZP_04858236.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39B_FAA] gi|251847816|gb|EES75784.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39BFAA] Length = 1114 Score = 150 bits (380), Expect = 8e-35, Method: Composition-based stats. Identities = 42/213 (19%), Positives = 78/213 (36%), Gaps = 26/213 (12%) Query: 2 KQYHKFQRELYCDLQGENIE-----AFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKI 56 K Y + + L ++ E ++ K Q+ + + K+ Sbjct: 891 KLYDAHVKRMMLMLDKQSEEEFKTSKITILAELTKLRQICCDPSLIFAD---YKADSAKV 947 Query: 57 KALEVIIEKA--NAAPIIVAYHFNSDLARLQKAFPQGRT----------LDKDPCTIQEW 104 +I A + I++ F + L L K + + +K ++ + Sbjct: 948 DMCLNMISNAVESGHKILLFSQFTTMLDHLAKRLEEEKISYYMLTGSTSKEKRAQMVENF 1007 Query: 105 NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA 164 N + + G GLNL +I++ F WW+L Q +R + G K Sbjct: 1008 NTDDTQVFCISLKAGGTGLNLT-AADIVIHFDPWWNLAVQNQATDR-----AHRIGQKNV 1061 Query: 165 VFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 V VY LI ++TI+E +L+ K + D +L Sbjct: 1062 VNVYKLIVKDTIEENILKLQEKKRELADQILEG 1094 >gi|217974039|ref|YP_002358790.1| Non-specific serine/threonine protein kinase [Shewanella baltica OS223] gi|217499174|gb|ACK47367.1| Non-specific serine/threonine protein kinase [Shewanella baltica OS223] Length = 1073 Score = 150 bits (380), Expect = 8e-35, Method: Composition-based stats. Identities = 45/209 (21%), Positives = 83/209 (39%), Gaps = 19/209 (9%) Query: 5 HKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIE 64 K R+L+ QG +K Q E+ K + K+ L+ + Sbjct: 860 EKKLRDLFAT-QGVGSSHIEFLDALLKLRQACCDPRLVKLEQAQKVKSNAKLDWLKQNLP 918 Query: 65 KA--NAAPIIVAYHFNSDLARLQKAFPQ---------GRTLDKDPCTIQEWNEGKIPLLF 113 + I++ F S L+ ++ G+T + I ++ EG P+ Sbjct: 919 EMVQEGRKILIFSQFTSMLSLIEAELVDLGLDYSKLTGQTRLRQAQ-IDKFQEGDTPVFL 977 Query: 114 AHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQ 173 + G GLNL + ++ + WW+ +Q +R + G + VFVY LIA+ Sbjct: 978 ISLKAGGTGLNLT-AADTVIHYDPWWNPAAEKQATDR-----AHRIGQDKPVFVYKLIAE 1031 Query: 174 NTIDELVLQRLRTKSTIQDLLLNALKKET 202 T++E + + + K ++ D +L K T Sbjct: 1032 GTVEEKIQEMQQHKQSLADSILEGKGKGT 1060 >gi|126173709|ref|YP_001049858.1| non-specific serine/threonine protein kinase [Shewanella baltica OS155] gi|125996914|gb|ABN60989.1| SNF2-related protein [Shewanella baltica OS155] Length = 1073 Score = 150 bits (380), Expect = 9e-35, Method: Composition-based stats. Identities = 45/209 (21%), Positives = 83/209 (39%), Gaps = 19/209 (9%) Query: 5 HKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIE 64 K R+L+ QG +K Q E+ K + K+ L+ + Sbjct: 860 EKKLRDLFAT-QGVGSSHIEFLDALLKLRQACCDPRLVKLEQAQKVKSNAKLDWLKQNLP 918 Query: 65 KA--NAAPIIVAYHFNSDLARLQKAFPQ---------GRTLDKDPCTIQEWNEGKIPLLF 113 + I++ F S L+ ++ G+T + I ++ EG P+ Sbjct: 919 EMVQEGRKILIFSQFTSMLSLIEAELVDLGLEYSKLTGQTRLRQAQ-IDKFQEGDTPVFL 977 Query: 114 AHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQ 173 + G GLNL + ++ + WW+ +Q +R + G + VFVY LIA+ Sbjct: 978 ISLKAGGTGLNLT-AADTVIHYDPWWNPAAEKQATDR-----AHRIGQDKPVFVYKLIAE 1031 Query: 174 NTIDELVLQRLRTKSTIQDLLLNALKKET 202 T++E + + + K ++ D +L K T Sbjct: 1032 GTVEEKIQEMQQHKQSLADSILEGKGKGT 1060 >gi|257438160|ref|ZP_05613915.1| N-domain protein, SNF2 family [Faecalibacterium prausnitzii A2-165] gi|257199491|gb|EEU97775.1| N-domain protein, SNF2 family [Faecalibacterium prausnitzii A2-165] Length = 1119 Score = 150 bits (379), Expect = 1e-34, Method: Composition-based stats. Identities = 42/186 (22%), Positives = 82/186 (44%), Gaps = 21/186 (11%) Query: 9 RELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANA 68 RE+ CD + ++K C++L AV E H + + LE++ ++ +A Sbjct: 931 REICCDPRLIADNWTGGSAKLDACIELVTSAV---ESGHRILLFSQFTSMLELLAKRLDA 987 Query: 69 APIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYG 128 + HF LQ + P+ ++ +N G+ + + G GLNL Sbjct: 988 EGV---SHFT-----LQGSTPKPV----RAELVRRFNGGEASVFLISLRAGGTGLNLT-A 1034 Query: 129 GNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKS 188 +I++ + WW++ Q +R + G + V VY LI Q+TI+E +++ + K Sbjct: 1035 ADIVIHYDPWWNVAAQNQATDR-----AYRIGQQNPVQVYKLITQDTIEEKIVELQQAKQ 1089 Query: 189 TIQDLL 194 + + + Sbjct: 1090 DLAETV 1095 >gi|190572706|ref|YP_001970551.1| putative helicase [Stenotrophomonas maltophilia K279a] gi|190010628|emb|CAQ44237.1| putative helicase [Stenotrophomonas maltophilia K279a] Length = 1105 Score = 150 bits (379), Expect = 1e-34, Method: Composition-based stats. Identities = 38/203 (18%), Positives = 77/203 (37%), Gaps = 18/203 (8%) Query: 7 FQRELYCDLQGENIEAFNSASK--TVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIE 64 ++++ + G + + +K Q+ + K+ L ++ Sbjct: 871 MEKQVREAISGSGLARSHIVVLDALLKLRQVCCDPRLLPGNAPARAAGSAKLDLLREMLP 930 Query: 65 KA--NAAPIIVAYHFNSDLARLQKAFPQ----GRTLDKDPCT----IQEWNEGKIPLLFA 114 I+V F L+ + +A TL D +Q + +G+IP+ Sbjct: 931 PMVEEGRRILVFSQFTGMLSLIAQALDDLGLAYVTLTGDTQDRATPVQRFMQGEIPVFLI 990 Query: 115 HPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQN 174 + G GLNL + ++ F WW+ Q +R + G ++ VFVY LI Sbjct: 991 SLKAGGVGLNLT-AADTVIHFDPWWNPAAENQASDR-----AHRIGQQQPVFVYRLITAG 1044 Query: 175 TIDELVLQRLRTKSTIQDLLLNA 197 +I+E + + K+ + + +L Sbjct: 1045 SIEERIAELQERKALLAESILEG 1067 >gi|160874619|ref|YP_001553935.1| non-specific serine/threonine protein kinase [Shewanella baltica OS195] gi|160860141|gb|ABX48675.1| Non-specific serine/threonine protein kinase [Shewanella baltica OS195] gi|315266860|gb|ADT93713.1| SNF2-related protein [Shewanella baltica OS678] Length = 1073 Score = 150 bits (379), Expect = 1e-34, Method: Composition-based stats. Identities = 45/209 (21%), Positives = 83/209 (39%), Gaps = 19/209 (9%) Query: 5 HKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIE 64 K R+L+ QG +K Q E+ K + K+ L+ + Sbjct: 860 EKKLRDLFAT-QGVGSSHIEFLDALLKLRQACCDPRLVKLEQAQKVKSNAKLDWLKQNLP 918 Query: 65 KA--NAAPIIVAYHFNSDLARLQKAFPQ---------GRTLDKDPCTIQEWNEGKIPLLF 113 + I++ F S L+ ++ G+T + I ++ EG P+ Sbjct: 919 EMVQEGRKILIFSQFTSMLSLIEAELVDLGLDYSKLTGQTRLRQAQ-IDKFQEGDTPVFL 977 Query: 114 AHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQ 173 + G GLNL + ++ + WW+ +Q +R + G + VFVY LIA+ Sbjct: 978 ISLKAGGTGLNLT-AADTVIHYDPWWNPAAEKQATDR-----AHRIGQDKPVFVYKLIAE 1031 Query: 174 NTIDELVLQRLRTKSTIQDLLLNALKKET 202 T++E + + + K ++ D +L K T Sbjct: 1032 GTVEEKIQEMQQHKQSLADSILEGKGKGT 1060 >gi|304409583|ref|ZP_07391203.1| SNF2-related protein [Shewanella baltica OS183] gi|307303941|ref|ZP_07583694.1| SNF2-related protein [Shewanella baltica BA175] gi|304352101|gb|EFM16499.1| SNF2-related protein [Shewanella baltica OS183] gi|306912839|gb|EFN43262.1| SNF2-related protein [Shewanella baltica BA175] Length = 1073 Score = 150 bits (379), Expect = 1e-34, Method: Composition-based stats. Identities = 45/209 (21%), Positives = 83/209 (39%), Gaps = 19/209 (9%) Query: 5 HKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIE 64 K R+L+ QG +K Q E+ K + K+ L+ + Sbjct: 860 EKKLRDLFAT-QGVGSSHIEFLDALLKLRQACCDPRLVKLEQAQKVKSNAKLDWLKQNLP 918 Query: 65 KA--NAAPIIVAYHFNSDLARLQKAFPQ---------GRTLDKDPCTIQEWNEGKIPLLF 113 + I++ F S L+ ++ G+T + I ++ EG P+ Sbjct: 919 EMVQEGRKILIFSQFTSMLSLIEAELVDLGLDYSKLTGQTRLRQAQ-IDKFQEGDTPVFL 977 Query: 114 AHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQ 173 + G GLNL + ++ + WW+ +Q +R + G + VFVY LIA+ Sbjct: 978 ISLKAGGTGLNLT-AADTVIHYDPWWNPAAEKQATDR-----AHRIGQDKPVFVYKLIAE 1031 Query: 174 NTIDELVLQRLRTKSTIQDLLLNALKKET 202 T++E + + + K ++ D +L K T Sbjct: 1032 GTVEEKIQEMQQHKQSLADSILEGKGKGT 1060 >gi|83649604|ref|YP_438039.1| SNF2 family DNA/RNA helicase [Hahella chejuensis KCTC 2396] gi|83637647|gb|ABC33614.1| Superfamily II DNA/RNA helicase, SNF2 family [Hahella chejuensis KCTC 2396] Length = 1106 Score = 150 bits (379), Expect = 1e-34, Method: Composition-based stats. Identities = 37/178 (20%), Positives = 70/178 (39%), Gaps = 18/178 (10%) Query: 29 TVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQK 86 +K Q+ + K K+ L ++ I++ F S L ++ Sbjct: 914 LLKLRQVCCDPSLLKLDSARKVKSSAKLDTLMSMLPSLLEEGRKILLFSQFTSMLGLIEA 973 Query: 87 AFPQ---------GRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSL 137 + G T D+D + + G++ L + G GLNL + ++ + Sbjct: 974 QLDKAGIEYVKLTGATKDRD-TPVNRFQNGEVSLFLISLKAGGVGLNLT-AADTVIHYDP 1031 Query: 138 WWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 WW+ Q +R + G + VFVY LI + T++E +++ + K + D LL Sbjct: 1032 WWNPAVENQATDR-----AYRIGQDKPVFVYKLITEGTVEEKIVELQKQKQALADNLL 1084 >gi|317153779|ref|YP_004121827.1| SNF2-like protein [Desulfovibrio aespoeensis Aspo-2] gi|316944030|gb|ADU63081.1| SNF2-related protein [Desulfovibrio aespoeensis Aspo-2] Length = 1069 Score = 150 bits (378), Expect = 1e-34, Method: Composition-based stats. Identities = 41/217 (18%), Positives = 84/217 (38%), Gaps = 24/217 (11%) Query: 5 HKFQRELYCDLQGENIEAF--NSASKTVKCLQLANGA--VYYDEEKHWKEVHDEKIKALE 60 K + ++ D++ + + + +K Q+ + D + K A + Sbjct: 850 KKLKDQVLRDVEEKGMAKSQMSILDALLKLRQICCHPRLLKLDMPGVSTNLPSGKFDAFK 909 Query: 61 VIIEK--ANAAPIIVAYHFNSDLARLQK---------AFPQGRTLDKDPCTIQEWNEGKI 109 ++ ++V F L ++ A+ G + D+ + + I Sbjct: 910 DLVIDIIEGGHKVLVFSQFVRMLHVIRSWLQIREIPFAYLDGSSKDRFEQVDRFNDNPDI 969 Query: 110 PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYY 169 P+ + G GLNL + ++ + WW+ Q +R + G KR VF Y Sbjct: 970 PIFLISLKAGGTGLNLT-SADYVIHYDPWWNPAVENQATDR-----THRIGQKRQVFAYK 1023 Query: 170 LIAQNTIDELVLQRLRTKSTIQDLLL---NALKKETI 203 +I QNT++E +L+ K + + ++ +ALK T Sbjct: 1024 MICQNTVEERILKLQEQKKDVAESIIPGQSALKGLTR 1060 >gi|32475836|ref|NP_868830.1| SWF/SNF family helicase [Rhodopirellula baltica SH 1] gi|32446379|emb|CAD76207.1| probable swi/snf family helicase 2 [Rhodopirellula baltica SH 1] Length = 1386 Score = 150 bits (378), Expect = 2e-34, Method: Composition-based stats. Identities = 37/213 (17%), Positives = 76/213 (35%), Gaps = 22/213 (10%) Query: 2 KQYHKFQRELYCDLQGENIEA---FNSASKTVKCLQLANGAVYYDEEKHWKEVH-DEKIK 57 Y +R+ +L+ + + ++ ++ + D + K + Sbjct: 1168 AMYEAMRRKALQNLEDSDDDRPVHIKILAELMRLRRFCCHPDLVDPDAGLKAAKLERFTD 1227 Query: 58 ALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRT----------LDKDPCTIQEWNEG 107 + +IE ++V F L L+ + + K ++ + +G Sbjct: 1228 TVTDLIE--GGHKVLVFSQFVGHLHLLRDRLDERKISYQYLDGSTPAKKRKTSVDAFQDG 1285 Query: 108 KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFV 167 + + + G GLNL + ++ WW+ Q +R + G +R V V Sbjct: 1286 EGDVFLISLKAGGVGLNLT-AADYVIHMDPWWNPAVEDQASDR-----AHRMGQQRPVTV 1339 Query: 168 YYLIAQNTIDELVLQRLRTKSTIQDLLLNALKK 200 Y I TI+E +LQ +K + D LL + Sbjct: 1340 YRFITTGTIEERILQLHESKRDLADSLLEGTES 1372 >gi|283851358|ref|ZP_06368640.1| SNF2-related protein [Desulfovibrio sp. FW1012B] gi|283573308|gb|EFC21286.1| SNF2-related protein [Desulfovibrio sp. FW1012B] Length = 1072 Score = 149 bits (377), Expect = 2e-34, Method: Composition-based stats. Identities = 41/218 (18%), Positives = 83/218 (38%), Gaps = 26/218 (11%) Query: 5 HKFQRELYCDLQGENIEAF--NSASKTVKCLQLANGA--VYYDEEKHWKEVHDEKIKALE 60 K + ++ + + + + +K Q+ + D + K A + Sbjct: 853 KKLKEQVLATVDEKGMAKSQMSILDALLKLRQICCHPRLLKLDLPGVNTNLPSGKFDAFK 912 Query: 61 VIIEK--ANAAPIIVAYHFNSDLARLQK---------AFPQGRTLDKDPCTIQEWNEGK- 108 +I ++V F L ++ A+ G + D+ + +NE + Sbjct: 913 DLITDCIEEGHKVLVFSQFVQMLHIIRSWMTISQMSFAYLDGSSKDRFDQ-VDRFNEDES 971 Query: 109 IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVY 168 I + + G GLNL + ++ + WW+ Q +R + G KR VF Y Sbjct: 972 IKVFLISLKAGGTGLNLT-SADYVIHYDPWWNPAVENQATDR-----THRIGQKRQVFSY 1025 Query: 169 YLIAQNTIDELVLQRLRTKSTIQDLLL---NALKKETI 203 +I QNT++E +L+ K + + ++ +A K T Sbjct: 1026 KMICQNTVEEKILKLQEQKKDVAEAIIPGQDAFKSLTR 1063 >gi|254452793|ref|ZP_05066230.1| helicase, Snf2 family [Octadecabacter antarcticus 238] gi|198267199|gb|EDY91469.1| helicase, Snf2 family [Octadecabacter antarcticus 238] Length = 970 Score = 149 bits (377), Expect = 2e-34, Method: Composition-based stats. Identities = 40/214 (18%), Positives = 75/214 (35%), Gaps = 23/214 (10%) Query: 5 HKFQRELYCD--LQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVI 62 RE L G I ++ +K Q+ + K K L I Sbjct: 754 DARVREALAKKGLAGSRITVLDA---LLKLRQVCCDPRLVKLDAAAKVKESAKFSRLMEI 810 Query: 63 IEK--ANAAPIIVAYHFNSDLARLQ---------KAFPQGRTLDKDPCTIQEWNEGKIPL 111 +E+ + +++ F L ++ A G+T D+ I ++ G + Sbjct: 811 MEELMSEGRKVLIFSQFVEMLRLIESEVQSRGWSYAMLHGQTRDRSSE-IDKFQSGDAQV 869 Query: 112 LFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLI 171 + G GLNL + ++ + WW+ +ER + R + G + VFVY L Sbjct: 870 FLISLKAGGTGLNLT-AADTVILYDPWWN-----PAVERQAMDRAHRIGQDKPVFVYRLY 923 Query: 172 AQNTIDELVLQRLRTKSTIQDLLLNALKKETIHV 205 + T++ + K + D L + + Sbjct: 924 TEGTVESAIQNMQARKQALADALFEGTSGGPMGL 957 >gi|126659998|ref|ZP_01731121.1| SWI/SNF family helicase [Cyanothece sp. CCY0110] gi|126618763|gb|EAZ89509.1| SWI/SNF family helicase [Cyanothece sp. CCY0110] Length = 854 Score = 149 bits (377), Expect = 2e-34, Method: Composition-based stats. Identities = 41/213 (19%), Positives = 81/213 (38%), Gaps = 25/213 (11%) Query: 1 MKQYHKFQRELYCDLQGENIEA----FNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKI 56 M Y +R+ L + + +K + ++ K K+ Sbjct: 634 MALYEALRRDSLEKLSESDDSGGQKHLQVLAALMKLRRCCCHPSLVLDDASLKG---SKL 690 Query: 57 KALEVIIEKA--NAAPIIVAYHF---------NSDLARLQKAFPQGRTLDKDPCT-IQEW 104 + + I+E+ N +V F + D ++ + G T K+ ++ + Sbjct: 691 QLFQEILEELLDNRHKALVFSQFVDHLQIIKSHLDRQKISYQYLDGSTPKKERQRRVKAF 750 Query: 105 NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA 164 G+ + + G GLNL + ++ WW+ Q +R + G +R Sbjct: 751 QSGEGDVFLISLKAGGTGLNLT-AADYVIHLDPWWNPAVEDQATDR-----AYRIGQQRP 804 Query: 165 VFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 V VY L+A++TI+E ++Q K + D LL+ Sbjct: 805 VTVYRLVAKDTIEEKIVQLHHRKRDLADSLLSG 837 >gi|325110937|ref|YP_004272005.1| SNF2-related protein [Planctomyces brasiliensis DSM 5305] gi|324971205|gb|ADY61983.1| SNF2-related protein [Planctomyces brasiliensis DSM 5305] Length = 1120 Score = 149 bits (377), Expect = 2e-34, Method: Composition-based stats. Identities = 48/212 (22%), Positives = 78/212 (36%), Gaps = 25/212 (11%) Query: 2 KQYHKFQ---RELYCDLQGEN---IEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEK 55 K Y + + R L E + ++ Q A D K + K Sbjct: 898 KLYDELKEYYRNSIFTLMDEQGLGKTKMHVLEALLRLRQAACHPGLLDSAKTGE--SSTK 955 Query: 56 IKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQ---------GRTLDKDPCTIQEW 104 + L +E+ A +V F S LA ++ + G T D+D Sbjct: 956 LDVLTEHLEELIAENHKTLVFSQFTSLLAIVKNHLDKANIPYVYLDGSTKDRDAVVQTFQ 1015 Query: 105 NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA 164 N+ IP+ + G GLNL + + WW+ Q I+R + G R Sbjct: 1016 NDKDIPVFLISLKAGGLGLNLT-AADYVFLLDPWWNPAVEAQAIDR-----AHRVGQTRN 1069 Query: 165 VFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 V Y LIA+ TI+E + + + K + D +L+ Sbjct: 1070 VIAYRLIARGTIEEKIAELQQNKRKLADAILS 1101 >gi|303257421|ref|ZP_07343434.1| SNF2/helicase domain protein [Burkholderiales bacterium 1_1_47] gi|302859778|gb|EFL82856.1| SNF2/helicase domain protein [Burkholderiales bacterium 1_1_47] Length = 1361 Score = 149 bits (376), Expect = 2e-34, Method: Composition-based stats. Identities = 44/209 (21%), Positives = 80/209 (38%), Gaps = 21/209 (10%) Query: 1 MKQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 + Y + LQ E I + K Q A D+ + KI+ Sbjct: 1143 LAIYENIRTRTLSGLQSEKINPIEALMALTKLRQAACSPELVDKH---LTIPSSKIRVFL 1199 Query: 61 VIIEKA--NAAPIIVAYHFNSDLARLQKAFPQGRTLD----------KDPCTIQEWNEGK 108 ++ + N +V F S LA +++A + + ++ + G Sbjct: 1200 ELVRELKENKHRALVFSQFTSFLALVRQALDKAGIEYLYLDGSVPAAQRKKLVETFQNGD 1259 Query: 109 IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVY 168 +PL + G GLNL + ++ WW+ Q +R + G KR V +Y Sbjct: 1260 MPLFLISLKAGGTGLNLT-AADYVIHLDPWWNPAVEDQASDR-----AYRIGQKRPVTIY 1313 Query: 169 YLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 LI++ T+++ +L+ +TK + D LL Sbjct: 1314 KLISEKTVEQKILELHKTKKNLADALLEG 1342 >gi|312959636|ref|ZP_07774153.1| SNF2-like protein [Pseudomonas fluorescens WH6] gi|311286353|gb|EFQ64917.1| SNF2-like protein [Pseudomonas fluorescens WH6] Length = 896 Score = 149 bits (376), Expect = 2e-34, Method: Composition-based stats. Identities = 35/181 (19%), Positives = 78/181 (43%), Gaps = 19/181 (10%) Query: 29 TVKCLQLANGAVYYDEEKHWKEVHDE-KIKALEVIIEK--ANAAPIIVAYHFNSDLARLQ 85 +K Q+ ++ K+ +L ++++ A I++ F S L+ ++ Sbjct: 696 LLKLRQVCCDLRLVNDATPPARGSSSGKLDSLLEMLDELFAEGRRILLFSQFTSMLSLIE 755 Query: 86 KAFPQ---------GRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFS 136 + G+T D+ ++++ GK+ + + G GLNL + ++ + Sbjct: 756 AELKKRGIAYALLTGQTRDRR-TPVKDFQSGKLQIFLISLKAGGVGLNLTE-ADTVIHYD 813 Query: 137 LWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 WW+ Q +R + G ++ VFVY +IA+ T++E + + KS + +L+ Sbjct: 814 PWWNPATENQATDR-----AYRIGQEKPVFVYKMIARGTVEEKIQHLQKEKSDLAAGVLD 868 Query: 197 A 197 Sbjct: 869 G 869 >gi|331003253|ref|ZP_08326760.1| hypothetical protein HMPREF0491_01622 [Lachnospiraceae oral taxon 107 str. F0167] gi|330412906|gb|EGG92286.1| hypothetical protein HMPREF0491_01622 [Lachnospiraceae oral taxon 107 str. F0167] Length = 1137 Score = 149 bits (376), Expect = 2e-34, Method: Composition-based stats. Identities = 38/185 (20%), Positives = 75/185 (40%), Gaps = 25/185 (13%) Query: 26 ASKTVKCLQLAN--GAVYYDEEKHWKEVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDL 81 S+ K Q+ G ++ + K++ +++ I++ F S L Sbjct: 944 LSEITKLRQICCDPGLIFENYSGGA-----AKLETCVDLVKSGIEAGHKILLFSQFTSML 998 Query: 82 ARLQKAFPQ----------GRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNI 131 ++K F + + +K + ++N + + G GLNL G +I Sbjct: 999 DIIEKRFKEENISSYMITGSTSKEKRIQLVNDFNNDDTNVFLISLKAGGTGLNL-VGADI 1057 Query: 132 LVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQ 191 ++ + WW+ Q +R + G K V VY LI + TI+E +++ +K + Sbjct: 1058 VIHYDPWWNFAAQNQATDR-----AHRIGQKNNVTVYRLITKGTIEERIVKLQESKKDLA 1112 Query: 192 DLLLN 196 D +LN Sbjct: 1113 DRVLN 1117 >gi|162451262|ref|YP_001613629.1| hypothetical protein sce2990 [Sorangium cellulosum 'So ce 56'] gi|161161844|emb|CAN93149.1| hypothetical protein sce2990 [Sorangium cellulosum 'So ce 56'] Length = 1141 Score = 149 bits (376), Expect = 2e-34, Method: Composition-based stats. Identities = 44/212 (20%), Positives = 79/212 (37%), Gaps = 23/212 (10%) Query: 2 KQYHKFQRELYCDLQGENI------EAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEK 55 Y + RE+ + GE + + Q A + + + K Sbjct: 915 ALYLQVAREVRAQVLGEVERVGLAKSQLQILAGLTRLRQAACDPRLLGLPREFGDDDSGK 974 Query: 56 IKALEVIIEKA--NAAPIIVAYHFNSDLARLQKAFPQ---------GRTLDKDPCTIQEW 104 + A+ +I A ++V F L ++KA + G T D+ + Sbjct: 975 LVAVRELIANAVEGGHKVLVFSQFVMMLRLIEKAMKEDGVAYEYLDGSTKDRAERVERFQ 1034 Query: 105 NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA 164 N+ +P+ + G GLNL + ++ F WW+ QQ +R + G + Sbjct: 1035 NDPSVPVFLISLKAGGTGLNLT-AADTVIHFDPWWNPAVEQQATDR-----AHRIGQTKV 1088 Query: 165 VFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 V Y LIA+ TI+E +L K + +L+ Sbjct: 1089 VTAYRLIAEGTIEEKILLLKDKKRQLVASVLS 1120 >gi|71279360|ref|YP_270079.1| Snf2 family protein [Colwellia psychrerythraea 34H] gi|71145100|gb|AAZ25573.1| Snf2 family protein [Colwellia psychrerythraea 34H] Length = 1134 Score = 149 bits (376), Expect = 3e-34, Method: Composition-based stats. Identities = 41/200 (20%), Positives = 80/200 (40%), Gaps = 21/200 (10%) Query: 9 RELYCD--LQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEK- 65 +++ D L+ IE ++ +K Q+ N E K K+ L + + Sbjct: 921 KDIIADKGLKRSQIEVLDA---LLKLRQVCNHPKLLKLEGAKKVNQSAKLDYLMETLPEQ 977 Query: 66 -ANAAPIIVAYHFNSDLARLQKAFPQGRT--------LDKDPCTIQEWNEGKIPLLFAHP 116 I++ F S L+ ++ K + ++ G++P+ Sbjct: 978 IDEGRKILIFSQFTSMLSLIEDELIDAGIGYVKLTGSTTKRQEVVDKFQRGEVPVFLISL 1037 Query: 117 ASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTI 176 + G GLNL + ++ F WW+ Q +R + G + VFVY LI +N+I Sbjct: 1038 RAGGVGLNLT-AADTVIHFDPWWNPAVENQATDR-----AYRIGQNKPVFVYKLIIENSI 1091 Query: 177 DELVLQRLRTKSTIQDLLLN 196 +E + + + K+ + LL+ Sbjct: 1092 EEKIQKIQQNKAELAKALLS 1111 >gi|126660775|ref|ZP_01731871.1| SWI/SNF family helicase [Cyanothece sp. CCY0110] gi|126617919|gb|EAZ88692.1| SWI/SNF family helicase [Cyanothece sp. CCY0110] Length = 1400 Score = 148 bits (375), Expect = 3e-34, Method: Composition-based stats. Identities = 41/213 (19%), Positives = 81/213 (38%), Gaps = 25/213 (11%) Query: 1 MKQYHKFQRELYCDLQGENIEA----FNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKI 56 M Y +R+ L + + +K + ++ K K+ Sbjct: 1180 MALYEALRRDSLEKLSESDDSGGQKHLQVLAALMKLRRCCCHPSLVLDDASLKG---SKL 1236 Query: 57 KALEVIIEKA--NAAPIIVAYHF---------NSDLARLQKAFPQGRTLDKDPCT-IQEW 104 + + I+E+ N +V F + D ++ + G T K+ ++ + Sbjct: 1237 QLFQEILEELLDNRHKALVFSQFVDHLQIIKSHLDRQKISYQYLDGSTPKKERQRRVKAF 1296 Query: 105 NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA 164 G+ + + G GLNL + ++ WW+ Q +R + G +R Sbjct: 1297 QSGEGDVFLISLKAGGTGLNLT-AADYVIHLDPWWNPAVEDQATDR-----AYRIGQQRP 1350 Query: 165 VFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 V VY L+A++TI+E ++Q K + D LL+ Sbjct: 1351 VTVYRLVAKDTIEEKIVQLHHRKRDLADSLLSG 1383 >gi|242280237|ref|YP_002992366.1| SNF2-related protein [Desulfovibrio salexigens DSM 2638] gi|242123131|gb|ACS80827.1| SNF2-related protein [Desulfovibrio salexigens DSM 2638] Length = 1069 Score = 148 bits (375), Expect = 3e-34, Method: Composition-based stats. Identities = 42/217 (19%), Positives = 83/217 (38%), Gaps = 24/217 (11%) Query: 5 HKFQRELYCDLQGENIEAF--NSASKTVKCLQLANGA--VYYDEEKHWKEVHDEKIKALE 60 + + ++ D+ + + + +K Q+ + D + K A + Sbjct: 850 KRLKDQVLRDVDEKGMAKSQMSILDALLKLRQICCHPRLLKLDMPGLSTNLPSGKFDAFK 909 Query: 61 VIIEK--ANAAPIIVAYHFNSDLARLQK---------AFPQGRTLDKDPCTIQEWNEGKI 109 +I ++V F L ++ A+ G + D+ + + I Sbjct: 910 DLIFDIVEGGHKVLVFSQFVQMLHVIRSWLTIKDIPFAYLDGSSKDRFEQVDRFNDSPDI 969 Query: 110 PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYY 169 P+ + G GLNL + ++ + WW+ Q +R + G KR VF Y Sbjct: 970 PIFLISLKAGGTGLNLT-SADYVIHYDPWWNPAVENQATDR-----THRIGQKRQVFAYK 1023 Query: 170 LIAQNTIDELVLQRLRTKSTIQDLLL---NALKKETI 203 +I QNT++E +L K ++ D ++ +ALK T Sbjct: 1024 MICQNTVEEKILGLQEMKKSVADAIIPGQSALKSLTR 1060 >gi|85860994|ref|YP_463196.1| swf/snf family helicase [Syntrophus aciditrophicus SB] gi|85724085|gb|ABC79028.1| swf/snf family helicase [Syntrophus aciditrophicus SB] Length = 1407 Score = 148 bits (375), Expect = 3e-34, Method: Composition-based stats. Identities = 44/212 (20%), Positives = 81/212 (38%), Gaps = 25/212 (11%) Query: 2 KQYHKFQRELYCDLQGENI----EAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIK 57 Y +R+ L+ + + ++ ++ Q + E+ K+ Sbjct: 1186 ALYEAMRRQAVETLEQNDSPVGQKHLKILAEIMRLRQACCHPRLVVPD---SELTSSKLA 1242 Query: 58 ALEVIIEKA--NAAPIIVAYHFNSDLARLQKAFPQ----------GRTLDKDPCTIQEWN 105 ++E+ N+ +V F S LA +Q Q G + ++ + Sbjct: 1243 LFGEVVEEMLENSHKALVFSQFVSHLALIQDYLKQKGIEYRYLDGGTPPKERRREVEAFQ 1302 Query: 106 EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 GK L + G GLNL + ++ WW+ Q +R + G KR V Sbjct: 1303 AGKGSLFLISLRAGGVGLNLT-AADFVIHMDPWWNPAVEDQASDR-----AHRIGQKRPV 1356 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 VY L+ +NTI+E +L+ +K + D LL+ Sbjct: 1357 TVYRLVTKNTIEEKILKLHASKRDLADSLLDG 1388 >gi|83591548|ref|YP_425300.1| SNF2 helicase-like protein [Rhodospirillum rubrum ATCC 11170] gi|83574462|gb|ABC21013.1| SNF2 helicase-related protein [Rhodospirillum rubrum ATCC 11170] Length = 1209 Score = 148 bits (375), Expect = 3e-34, Method: Composition-based stats. Identities = 36/183 (19%), Positives = 68/183 (37%), Gaps = 19/183 (10%) Query: 26 ASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLAR 83 + + Q+ + K K+ LE ++ +V F S LA Sbjct: 1014 LAALTRLRQVCCDPRLV-KGGPRKPPPSAKLDRLEEMLRDLVDEGRRTLVFSAFPSMLAL 1072 Query: 84 LQKAF---------PQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVF 134 +++ G T D+D + + G +P+ + G GL L + ++ Sbjct: 1073 VEERLAAASIPWVSLTGETRDRD-TPVTRFQSGAVPVFLISLKAGGTGLTLT-AADTVIH 1130 Query: 135 FSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 + WW+ Q +R + G + VFV+ L+A T++E +L K + D L Sbjct: 1131 YDPWWNPAVEAQATDR-----AHRIGQDKPVFVHKLVAAGTVEERILALQDRKRGLLDGL 1185 Query: 195 LNA 197 + Sbjct: 1186 FDG 1188 >gi|171915800|ref|ZP_02931270.1| probable helicase [Verrucomicrobium spinosum DSM 4136] Length = 896 Score = 148 bits (375), Expect = 3e-34, Method: Composition-based stats. Identities = 44/206 (21%), Positives = 78/206 (37%), Gaps = 22/206 (10%) Query: 5 HKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIK-----AL 59 K RE D QG +K Q+ E K K + L Sbjct: 681 DKRVREAIAD-QGIEKSQLIVLDALLKLRQVCCHPSLLKTESAKKVETSAKTEYLMDEML 739 Query: 60 EVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTL--------DKDPCTIQEWNEGKIPL 111 +IE+ I++ F S L L++ + + ++++ G +P+ Sbjct: 740 PELIEE--GRRILIFSQFTSMLDILERMLKERGIRYVKLTGSTEDRMKPVEQFQNGDMPV 797 Query: 112 LFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLI 171 + G G+ L + ++ + WW+ Q +R + G K+ VFV+ LI Sbjct: 798 FLISLKAGGVGITLT-AADTVIHYDPWWNPAIEAQATDR-----AYRIGQKKPVFVHKLI 851 Query: 172 AQNTIDELVLQRLRTKSTIQDLLLNA 197 Q TI+E +++ R KS + + LL Sbjct: 852 CQGTIEERIVEMQRRKSALINGLLTG 877 >gi|237654129|ref|YP_002890443.1| SNF2-related protein [Thauera sp. MZ1T] gi|237625376|gb|ACR02066.1| SNF2-related protein [Thauera sp. MZ1T] Length = 1100 Score = 148 bits (375), Expect = 3e-34, Method: Composition-based stats. Identities = 31/179 (17%), Positives = 71/179 (39%), Gaps = 18/179 (10%) Query: 29 TVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQK 86 +K Q+ + K+ L ++ + I+V F + L + Sbjct: 903 LLKLRQVCCDPRLLKSPAALRVKERAKLDLLMDMLPELIDEGRRILVFSQFTTMLGLIAA 962 Query: 87 AFPQGR---------TLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSL 137 + + T D+ ++++ +G++P+ + G GLNL + ++ + Sbjct: 963 ELDKAKIGWVALTGDTRDRR-VPVEDFQKGRVPVFLISLKAGGVGLNLT-AADTVIHYDP 1020 Query: 138 WWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 WW+ Q +R + G + VFV+ L+ +I+E +L K+ + + +L+ Sbjct: 1021 WWNPAAENQATDR-----AHRIGQDKPVFVFKLVCAGSIEEKILALQERKAALAESVLS 1074 >gi|323697573|ref|ZP_08109485.1| SNF2-related protein [Desulfovibrio sp. ND132] gi|323457505|gb|EGB13370.1| SNF2-related protein [Desulfovibrio desulfuricans ND132] Length = 1069 Score = 148 bits (375), Expect = 3e-34, Method: Composition-based stats. Identities = 41/217 (18%), Positives = 82/217 (37%), Gaps = 24/217 (11%) Query: 5 HKFQRELYCDLQGENIEAF--NSASKTVKCLQLANGA--VYYDEEKHWKEVHDEKIKALE 60 K + ++ D+ + + + +K Q+ + D + K A + Sbjct: 850 KKLKDQVLKDVDEKGMAKSQMSILDALLKLRQICCHPRLLKLDMPGVSTNLPSGKFDAFK 909 Query: 61 VIIEK--ANAAPIIVAYHFNSDLARLQK---------AFPQGRTLDKDPCTIQEWNEGKI 109 ++ ++V F L ++ A+ G + D+ + I Sbjct: 910 DLVVDIIEGGHKVLVFSQFVQMLHVIRNWLQIREIPFAYLDGSSKDRFEQVDRFNENPDI 969 Query: 110 PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYY 169 P+ + G GLNL + ++ + WW+ Q +R + G KR VF Y Sbjct: 970 PIFLISLKAGGTGLNLT-SADYVIHYDPWWNPAVENQATDR-----THRIGQKRQVFAYK 1023 Query: 170 LIAQNTIDELVLQRLRTKSTIQDLLL---NALKKETI 203 +I QNT++E +L+ K + + ++ +ALK T Sbjct: 1024 MIRQNTVEERILKLQEQKKDVAEAIIPGQSALKSLTR 1060 >gi|303248715|ref|ZP_07334968.1| SNF2-related protein [Desulfovibrio fructosovorans JJ] gi|302489880|gb|EFL49808.1| SNF2-related protein [Desulfovibrio fructosovorans JJ] Length = 1072 Score = 148 bits (374), Expect = 4e-34, Method: Composition-based stats. Identities = 40/218 (18%), Positives = 83/218 (38%), Gaps = 26/218 (11%) Query: 5 HKFQRELYCDLQGENIEAF--NSASKTVKCLQLANGA--VYYDEEKHWKEVHDEKIKALE 60 K + ++ + + + + +K Q+ + D + K A + Sbjct: 853 KKLKEQVLATVDEKGMAKSQMSILDALLKLRQICCHPRLLKLDLPGVNTNLPSGKFDAFK 912 Query: 61 VIIEK--ANAAPIIVAYHFNSDLARLQK---------AFPQGRTLDKDPCTIQEWNEGK- 108 +I ++V F L ++ A+ G + D+ + +NE + Sbjct: 913 DLITDCIEEGHKVLVFSQFVQMLHIIRSWVTISQIPFAYLDGSSKDRFDQ-VDRFNEDEN 971 Query: 109 IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVY 168 I + + G GLNL + ++ + WW+ Q +R + G +R VF Y Sbjct: 972 IKVFLISLKAGGTGLNLT-SADYVIHYDPWWNPAVENQATDR-----THRIGQQRQVFSY 1025 Query: 169 YLIAQNTIDELVLQRLRTKSTIQDLLL---NALKKETI 203 +I QNT++E +L+ K + + ++ +A K T Sbjct: 1026 KMICQNTVEEKILKLQEQKKDVAEAIIPGQDAFKSLTR 1063 >gi|282865750|ref|ZP_06274800.1| SNF2-related protein [Streptomyces sp. ACTE] gi|282559394|gb|EFB64946.1| SNF2-related protein [Streptomyces sp. ACTE] Length = 957 Score = 148 bits (374), Expect = 4e-34, Method: Composition-based stats. Identities = 44/210 (20%), Positives = 79/210 (37%), Gaps = 21/210 (10%) Query: 3 QYHKFQRELYCDLQGENIEAFNSAS--KTVKCLQLANG-AVYYDEEKHWKEVHDEKIKAL 59 Y RE ++ G + A Q+ N A Y EE+ K++ L Sbjct: 730 LYEAVVRETMAEISGADGFARRGLVVKLLTALKQICNHPAQYLKEEEPRIADRSGKVELL 789 Query: 60 EVIIEK--ANAAPIIVAYHFNSDLARLQKAFP----------QGRTLDKDPCTIQEWNEG 107 + +++ A A ++V + L++ G + + + + G Sbjct: 790 DELLDTILAEGASVLVFTQYVRMGRLLEQHLAVRGVRTQFLHGGTPVAEREAMVNRFQAG 849 Query: 108 KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFV 167 P+ + G GLNL G+ +V F WW+ Q +R + G + V V Sbjct: 850 DAPVFLLSLKAAGTGLNLTRAGH-VVHFDRWWNPAVEAQATDR-----AYRIGQTQPVQV 903 Query: 168 YYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + LIA+ TI++ + L K + D +L Sbjct: 904 HRLIAEGTIEDRIAGMLARKQGLADAVLGG 933 >gi|300718555|ref|YP_003743358.1| helicase/SNF2 domain-containing protein [Erwinia billingiae Eb661] gi|299064391|emb|CAX61511.1| helicase/SNF2 domain-containing protein [Erwinia billingiae Eb661] Length = 877 Score = 148 bits (373), Expect = 5e-34, Method: Composition-based stats. Identities = 38/175 (21%), Positives = 74/175 (42%), Gaps = 18/175 (10%) Query: 33 LQLANGAVYYDEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQ 90 Q+ +K K H K+ L +++ A I++ F + L+ + + + Sbjct: 689 RQICCDPRLVKTDKAAKVKHSAKLALLREMLDDLLAEDRRILIFSQFTTMLSLIAEELQK 748 Query: 91 GR---------TLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDL 141 R T D+ ++ + EG++P+ + G GLNL + ++ + WW+ Sbjct: 749 ARIPFVTLTGSTRDRIE-PVRRFQEGEVPVFLISLKAGGVGLNLT-AADTVIHYDPWWNP 806 Query: 142 EEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 Q +R + G + VFVY LIA +I+E ++ K+ + D +L Sbjct: 807 AAENQATDR-----AYRLGQDKPVFVYKLIAAGSIEEKIVALQGQKAELADSILE 856 >gi|107100261|ref|ZP_01364179.1| hypothetical protein PaerPA_01001285 [Pseudomonas aeruginosa PACS2] Length = 773 Score = 148 bits (373), Expect = 5e-34, Method: Composition-based stats. Identities = 41/183 (22%), Positives = 78/183 (42%), Gaps = 22/183 (12%) Query: 29 TVKCLQLANGAV----YYDEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLA 82 +K Q+ D + + + K+ L ++++ A +++ F S LA Sbjct: 573 LLKLRQVCCDTRLLQRQEDGARSGRALSSGKLAYLLDMLDELIAEGRRVLLFSQFTSMLA 632 Query: 83 RLQKAFPQ---------GRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILV 133 ++ A Q G T D+ +Q + GK+P+ + G GLNL + ++ Sbjct: 633 LIEDALRQRGVDYVLLTGETRDRR-APVQRFQSGKVPVFLISLKAGGVGLNLT-AADTVI 690 Query: 134 FFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDL 193 + WW+ Q +R + G + VFVY LIA+ T++E + + K+ + D Sbjct: 691 HYDPWWNPAVENQASDR-----AYRIGQDKPVFVYRLIARGTVEEKIQHLQQEKAALADG 745 Query: 194 LLN 196 L + Sbjct: 746 LFS 748 >gi|310827837|ref|YP_003960194.1| HepA/SNF2 family protein [Eubacterium limosum KIST612] gi|308739571|gb|ADO37231.1| HepA/SNF2 family protein [Eubacterium limosum KIST612] Length = 1029 Score = 148 bits (373), Expect = 6e-34, Method: Composition-based stats. Identities = 43/204 (21%), Positives = 87/204 (42%), Gaps = 27/204 (13%) Query: 8 QRELYCDLQGENIE--AFNSASKTVKCLQLAN--GAVYYDEEKHWKEVHDEKIKALEVII 63 + +L +L G + E + + Q+ VY D K++ I+ Sbjct: 817 REDLAYELDGGDFERRKLIILAMLTRLRQICCDPSLVYEDYTDV-----SAKLELCLEIL 871 Query: 64 EK--ANAAPIIVAYHFNSDLARLQKAFPQ---------GRTLDKDP-CTIQEWNEGKIPL 111 + A+ +++ F S L ++K + GRT ++ + +NE P+ Sbjct: 872 DTSLASGHKVLLFSQFTSMLEIIEKELIKREIDFYKITGRTKAQERLRQVNAFNEDDTPV 931 Query: 112 LFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLI 171 + G GLNL G ++++ + WW+L Q +R + G +V VY LI Sbjct: 932 FLISLKAGGTGLNLT-GADVVIHYDPWWNLSAQNQATDR-----AHRIGQTNSVQVYNLI 985 Query: 172 AQNTIDELVLQRLRTKSTIQDLLL 195 A+++I+E + + + K+ + D ++ Sbjct: 986 AKDSIEEKIQKMQQAKAELADSII 1009 >gi|239623482|ref|ZP_04666513.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47_FAA] gi|239521513|gb|EEQ61379.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47FAA] Length = 1088 Score = 148 bits (373), Expect = 6e-34, Method: Composition-based stats. Identities = 39/208 (18%), Positives = 86/208 (41%), Gaps = 26/208 (12%) Query: 1 MKQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGA-VYYDEEKHWKEVHDEKIKAL 59 MK K + + + + ++ ++ QL + Y+ KH K++ Sbjct: 869 MKLKEKLESGGFSESGDGRL---QILAELMRLRQLCCDPRLCYENYKH----ESAKLETC 921 Query: 60 EVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQ----------GRTLDKDPCTIQEWNEG 107 ++ + + I++ F S L ++K + + ++ + E+ Sbjct: 922 MDLVRRGISGEHKILLFSQFTSMLELIEKRLSKEGMASHKLTGATSKEERIRMVGEFQRD 981 Query: 108 KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFV 167 +P+ + G GLNL +I++ + WW++ Q +R + G ++ V V Sbjct: 982 DVPVFLISLKAGGTGLNLT-AADIVIHYDPWWNVAAQNQATDR-----THRIGQEKQVTV 1035 Query: 168 YYLIAQNTIDELVLQRLRTKSTIQDLLL 195 Y LI +NTI+E +L+ +K + D ++ Sbjct: 1036 YKLITRNTIEENILKLQESKQYLADQIV 1063 >gi|296390849|ref|ZP_06880324.1| helicase [Pseudomonas aeruginosa PAb1] Length = 773 Score = 148 bits (373), Expect = 6e-34, Method: Composition-based stats. Identities = 41/183 (22%), Positives = 78/183 (42%), Gaps = 22/183 (12%) Query: 29 TVKCLQLANGAV----YYDEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLA 82 +K Q+ D + + + K+ L ++++ A +++ F S LA Sbjct: 573 LLKLRQVCCDTRLLQRQEDGARSGRALSSGKLAYLLDMLDELIAEGRRVLLFSQFTSMLA 632 Query: 83 RLQKAFPQ---------GRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILV 133 ++ A Q G T D+ +Q + GK+P+ + G GLNL + ++ Sbjct: 633 LIEDALRQRGVDYVLLTGETRDRR-APVQRFQSGKVPVFLISLKAGGVGLNLT-AADTVI 690 Query: 134 FFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDL 193 + WW+ Q +R + G + VFVY LIA+ T++E + + K+ + D Sbjct: 691 HYDPWWNPAVENQASDR-----AYRIGQDKPVFVYRLIARGTVEEKIQHLQQEKAALADG 745 Query: 194 LLN 196 L + Sbjct: 746 LFS 748 >gi|313105624|ref|ZP_07791890.1| putative helicase [Pseudomonas aeruginosa 39016] gi|310878392|gb|EFQ36986.1| putative helicase [Pseudomonas aeruginosa 39016] Length = 773 Score = 148 bits (373), Expect = 6e-34, Method: Composition-based stats. Identities = 41/183 (22%), Positives = 78/183 (42%), Gaps = 22/183 (12%) Query: 29 TVKCLQLANGAV----YYDEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLA 82 +K Q+ D + + + K+ L ++++ A +++ F S LA Sbjct: 573 LLKLRQVCCDTRLLQRQEDGARSGRALSSGKLAYLLDMLDELIAEGRRVLLFSQFTSMLA 632 Query: 83 RLQKAFPQ---------GRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILV 133 ++ A Q G T D+ +Q + GK+P+ + G GLNL + ++ Sbjct: 633 LIEDALRQRGVDYVLLTGETRDRR-APVQRFQSGKVPVFLISLKAGGVGLNLT-AADTVI 690 Query: 134 FFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDL 193 + WW+ Q +R + G + VFVY LIA+ T++E + + K+ + D Sbjct: 691 HYDPWWNPAVENQASDR-----AYRIGQDKPVFVYRLIARGTVEEKIQHLQQEKAALADG 745 Query: 194 LLN 196 L + Sbjct: 746 LFS 748 >gi|229828003|ref|ZP_04454072.1| hypothetical protein GCWU000342_00052 [Shuttleworthia satelles DSM 14600] gi|229792597|gb|EEP28711.1| hypothetical protein GCWU000342_00052 [Shuttleworthia satelles DSM 14600] Length = 1314 Score = 148 bits (373), Expect = 6e-34, Method: Composition-based stats. Identities = 44/213 (20%), Positives = 85/213 (39%), Gaps = 27/213 (12%) Query: 2 KQYHKFQRELYCDLQGENIEAFN-----SASKTVKCLQLANGAVYYDEEKHWKEVHDEKI 56 + Y + + G EA+N ++ K Q+ + E K Sbjct: 1094 RLYDAQVARMRAMIAGAG-EAYNRNKIQVLAELTKIRQICCDPSIFVEG---YRGKSAKR 1149 Query: 57 KALEVIIEKA--NAAPIIVAYHFNSDLARLQKAFPQGRT----------LDKDPCTIQEW 104 KA +I A ++V F S LA L++ + + ++ + + Sbjct: 1150 KACLDLIGSAIDGGHKMLVFSQFTSMLALLEEDLSRAKIPFYKITGATGKEERLRLVHAF 1209 Query: 105 NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA 164 N+ + P+ + G GLNL G ++++ + WW+L Q +R + G + Sbjct: 1210 NDDETPVFLISLKAGGTGLNLT-GADLVIHYDPWWNLAAQNQATDR-----AHRIGQTKD 1263 Query: 165 VFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 V V+ LIA+ TI++ +L+ K + D +L+ Sbjct: 1264 VSVFRLIAKGTIEDRILEMQEKKKDLADAILSG 1296 >gi|113970955|ref|YP_734748.1| SNF2-like protein [Shewanella sp. MR-4] gi|113885639|gb|ABI39691.1| SNF2-related protein [Shewanella sp. MR-4] Length = 1082 Score = 148 bits (373), Expect = 6e-34, Method: Composition-based stats. Identities = 45/208 (21%), Positives = 88/208 (42%), Gaps = 27/208 (12%) Query: 5 HKFQRELYCD--LQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKI----KA 58 K REL+ + G +IE ++ +K Q E+ K ++ K+ + Sbjct: 869 EKKIRELFASQGVAGSHIEFLDA---LLKLRQACCDPRLVKLEQAQKVKNNAKLNWLSQN 925 Query: 59 LEVIIEKANAAPIIVAYHFNSDLARLQKAF---------PQGRTLDKDPCTIQEWNEGKI 109 L ++++ I++ F S L +++ G+T + I ++ EG Sbjct: 926 LPEMVQE--GRKILIFSQFTSMLILIEELLQSLDIDYSKLTGQTRLRQGQ-IDKFQEGDT 982 Query: 110 PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYY 169 P+ + G GLNL + ++ + WW+ +Q +R + G + VFVY Sbjct: 983 PVFLISLKAGGTGLNLT-AADTVIHYDPWWNPAAEKQATDR-----AHRIGQENPVFVYK 1036 Query: 170 LIAQNTIDELVLQRLRTKSTIQDLLLNA 197 LIA+ T++E + + + K + D +L Sbjct: 1037 LIAEGTVEEKIQEMQQHKQGLADSILEG 1064 >gi|229589086|ref|YP_002871205.1| putative helicase [Pseudomonas fluorescens SBW25] gi|229360952|emb|CAY47812.1| putative helicase [Pseudomonas fluorescens SBW25] Length = 897 Score = 147 bits (372), Expect = 7e-34, Method: Composition-based stats. Identities = 36/181 (19%), Positives = 78/181 (43%), Gaps = 19/181 (10%) Query: 29 TVKCLQLANGAVYYDEEK-HWKEVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQ 85 +K Q+ ++ + K+ +L ++E+ I++ F S L+ ++ Sbjct: 697 LLKLRQVCCDLRLVNDATLPARGSSSGKLDSLMTMLEELFEEGRRILLFSQFTSMLSLIE 756 Query: 86 ---------KAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFS 136 A G+T D+ ++++ GK+ + + G GLNL + ++ + Sbjct: 757 VELKKRGVAYALLTGQTRDRR-TPVKDFQSGKLQIFLISLKAGGVGLNLTE-ADTVIHYD 814 Query: 137 LWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 WW+ Q +R + G ++ VFVY +IA+ T++E + + KS + +L+ Sbjct: 815 PWWNPATENQATDR-----AYRIGQEKPVFVYKMIARGTVEEKIQHLQKEKSDLAAGVLD 869 Query: 197 A 197 Sbjct: 870 G 870 >gi|302671400|ref|YP_003831360.1| helicase SNF2 family [Butyrivibrio proteoclasticus B316] gi|302395873|gb|ADL34778.1| helicase SNF2 family [Butyrivibrio proteoclasticus B316] Length = 1034 Score = 147 bits (372), Expect = 7e-34, Method: Composition-based stats. Identities = 44/185 (23%), Positives = 72/185 (38%), Gaps = 25/185 (13%) Query: 26 ASKTVKCLQLAN--GAVYYDEEKHWKEVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDL 81 S+ + QL G +Y + K +I A + +++ F S L Sbjct: 842 LSELTRLRQLCCDPGLIYDNYTGG-----SAKADLCLEMIRSAAESGHKVLLFSQFTSML 896 Query: 82 AR---------LQKAFPQGRTLDKDP-CTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNI 131 R ++ G T +D + + E P+ + G GLNL +I Sbjct: 897 ERLTAILKKEGIKHYLLTGSTQKEDRIRMVDAFQEDDTPVFCISLKAGGTGLNLT-AADI 955 Query: 132 LVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQ 191 ++ + WW++ Q +R + G K V VY LI QNTI+E ++ K + Sbjct: 956 VIHYDHWWNIAVENQATDR-----AHRIGQKNVVTVYRLIMQNTIEERIILLQNKKKELA 1010 Query: 192 DLLLN 196 D LLN Sbjct: 1011 DQLLN 1015 >gi|114048179|ref|YP_738729.1| SNF2-like protein [Shewanella sp. MR-7] gi|113889621|gb|ABI43672.1| SNF2-related protein [Shewanella sp. MR-7] Length = 1082 Score = 147 bits (372), Expect = 7e-34, Method: Composition-based stats. Identities = 45/208 (21%), Positives = 88/208 (42%), Gaps = 27/208 (12%) Query: 5 HKFQRELYCD--LQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKI----KA 58 K REL+ + G +IE ++ +K Q E+ K ++ K+ + Sbjct: 869 EKKIRELFASQGVAGSHIEFLDA---LLKLRQACCDPRLVKLEQAQKVKNNAKLNWLSQN 925 Query: 59 LEVIIEKANAAPIIVAYHFNSDLARLQKAF---------PQGRTLDKDPCTIQEWNEGKI 109 L ++++ I++ F S L +++ G+T + I ++ EG Sbjct: 926 LPEMVQE--GRKILIFSQFTSMLILIEELLQSLDIDYSKLTGQTRLRQGQ-IDKFQEGDT 982 Query: 110 PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYY 169 P+ + G GLNL + ++ + WW+ +Q +R + G + VFVY Sbjct: 983 PVFLISLKAGGTGLNLT-AADTVIHYDPWWNPAAEKQATDR-----AHRIGQENPVFVYK 1036 Query: 170 LIAQNTIDELVLQRLRTKSTIQDLLLNA 197 LIA+ T++E + + + K + D +L Sbjct: 1037 LIAEGTVEEKIQEMQQHKQGLADSILEG 1064 >gi|283796858|ref|ZP_06346011.1| protein, SNF2 family [Clostridium sp. M62/1] gi|291075264|gb|EFE12628.1| protein, SNF2 family [Clostridium sp. M62/1] Length = 449 Score = 147 bits (372), Expect = 8e-34, Method: Composition-based stats. Identities = 42/209 (20%), Positives = 91/209 (43%), Gaps = 21/209 (10%) Query: 3 QYHKFQRELYCDLQ-GENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEV 61 Y + +RE + +L+ G I A +K ++ Q G + D E+ + V K+ ALE Sbjct: 241 IYDRIKRESFAELESGGQISATTVLTKLLRLQQFTGGFLVADGEEKPELVSKGKLNALEE 300 Query: 62 IIEK---ANAAPIIVAYHFNSDLARLQKAFPQGRT----------LDKDPCTIQEWN-EG 107 I++ +++ F ++ + + + + L+ ++++ Sbjct: 301 IVDDYVVDAGKKLVIFARFRPEIDIIGQMLKKKKLRYGEIYGDVKLEDRGDIVKDFQTNP 360 Query: 108 KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFV 167 + + A + G G+ L + V++S+ ++ + Q + RI + G K A Sbjct: 361 ETMVFLAQIDTAGLGITLT-AADTCVYYSVNFNYAAYSQSLARI-----HRIGQKNACTY 414 Query: 168 YYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 +LI + TIDE+VL+ L K + +++ Sbjct: 415 IHLITEGTIDEVVLKALAKKEDLAKTVVD 443 >gi|239908234|ref|YP_002954975.1| putative helicase [Desulfovibrio magneticus RS-1] gi|239798100|dbj|BAH77089.1| putative helicase [Desulfovibrio magneticus RS-1] Length = 1075 Score = 147 bits (372), Expect = 8e-34, Method: Composition-based stats. Identities = 38/217 (17%), Positives = 77/217 (35%), Gaps = 24/217 (11%) Query: 5 HKFQRELYCDLQGENIEAF--NSASKTVKCLQLANGA--VYYDEEKHWKEVHDEKIKALE 60 K + ++ + + + + +K Q+ + D + K A + Sbjct: 856 KKLKEQVLATVDEKGMAKSQMSILDALLKLRQICCHPRLLKLDLPGVNTNLPSGKFDAFK 915 Query: 61 VIIEK--ANAAPIIVAYHFNSDLARLQK---------AFPQGRTLDKDPCTIQEWNEGKI 109 +I ++V F L ++ + G + D+ + I Sbjct: 916 DLITDCIEEGHKVLVFSQFVQMLHIIRSWMSISQMPFCYLDGSSKDRFDQVDKFNQTEDI 975 Query: 110 PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYY 169 + + G GLNL + ++ + WW+ Q +R + G R VF Y Sbjct: 976 KVFLISLKAGGTGLNLT-SADYVIHYDPWWNPAVENQATDR-----THRIGQLRQVFSYK 1029 Query: 170 LIAQNTIDELVLQRLRTKSTIQDLLL---NALKKETI 203 LI QNT++E +L+ K + + ++ +A K T Sbjct: 1030 LICQNTVEEKILKLQEQKKDVAEAVIPGQDAFKSLTR 1066 >gi|94986612|ref|YP_594545.1| SNF2 family DNA/RNA helicase [Lawsonia intracellularis PHE/MN1-00] gi|94730861|emb|CAJ54224.1| Superfamily II DNA/RNA helicases, SNF2 family [Lawsonia intracellularis PHE/MN1-00] Length = 1073 Score = 147 bits (372), Expect = 8e-34, Method: Composition-based stats. Identities = 39/207 (18%), Positives = 79/207 (38%), Gaps = 22/207 (10%) Query: 5 HKFQRELYCDLQGENIEAF--NSASKTVKCLQLANGA--VYYDEEK-HWKEVHDEKIKAL 59 K + ++ D++ + I + +K Q+ + D + K +A Sbjct: 853 KKLRSQVLADIETKGIAKSQMSILDALLKLRQICCHPRLLKVDMPGFSIGSLASGKFEAF 912 Query: 60 EVIIEK--ANAAPIIVAYHFNSDLARLQK---------AFPQGRTLDKDPCTIQEWNEGK 108 + +I ++V F L ++ + G + D+ + N + Sbjct: 913 KDMIFDIVEGGHKVLVFSQFVQMLQLIKSWLQITDIPFCYLDGTSKDRLEQVDKFNNTPE 972 Query: 109 IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVY 168 IP+ + G GLNL + ++ + WW+ Q +R + G R VF Y Sbjct: 973 IPVFLISLKAGGTGLNLT-SADYVIHYDPWWNPAVESQATDR-----THRIGQTRQVFSY 1026 Query: 169 YLIAQNTIDELVLQRLRTKSTIQDLLL 195 LI QNT++E +L+ K + + ++ Sbjct: 1027 KLICQNTVEEKILKLQEMKRGVAEAII 1053 >gi|126660084|ref|ZP_01731204.1| SWI/SNF family helicase [Cyanothece sp. CCY0110] gi|126618604|gb|EAZ89353.1| SWI/SNF family helicase [Cyanothece sp. CCY0110] Length = 1400 Score = 147 bits (371), Expect = 8e-34, Method: Composition-based stats. Identities = 42/213 (19%), Positives = 81/213 (38%), Gaps = 25/213 (11%) Query: 1 MKQYHKFQRELYCDLQGENIEA----FNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKI 56 M Y +R+ L + + +K + + + + K+ Sbjct: 1180 MALYEALRRDSLEKLSESDDSGGQKHLQVLAALMKLRRCCCHPSLILD---YSSLKGSKL 1236 Query: 57 KALEVIIEKA--NAAPIIVAYHF-------NSDLAR--LQKAFPQGRTLDKDPCT-IQEW 104 + + I+E+ N +V F S L R + + G T K+ ++ + Sbjct: 1237 QLFQEILEELLDNRHKALVFSQFVDHLQIVKSHLERQKISYQYLDGSTPKKERQRRVKAF 1296 Query: 105 NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA 164 G+ + + G GLNL + ++ WW+ Q +R + G +R Sbjct: 1297 QSGEGDVFLISLKAGGTGLNLT-AADYVIHLDPWWNPAVEDQATDR-----AYRIGQQRP 1350 Query: 165 VFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 V VY L+A++TI+E ++Q K + D LL+ Sbjct: 1351 VTVYRLVAKDTIEEKIVQLHHRKRDLADSLLSG 1383 >gi|298528450|ref|ZP_07015854.1| SNF2-related protein [Desulfonatronospira thiodismutans ASO3-1] gi|298512102|gb|EFI36004.1| SNF2-related protein [Desulfonatronospira thiodismutans ASO3-1] Length = 1068 Score = 147 bits (371), Expect = 9e-34, Method: Composition-based stats. Identities = 38/208 (18%), Positives = 79/208 (37%), Gaps = 25/208 (12%) Query: 5 HKFQRELYCDLQGENIEAF--NSASKTVKCLQLANGA--VYYDEEKHWKEVHDEKIKALE 60 K + ++ + + I A + +K Q+ + + + K +A + Sbjct: 849 KKLKEQVLQRVDEKGISASQMSILDALLKLRQICCHPRLLRLNMPGLNNNIPSGKFEAFK 908 Query: 61 V----IIEKANAAPIIVAYHFNSDLARLQ---------KAFPQGRTLDKDPCTIQEWNEG 107 IIE + ++V F L ++ A+ G + D+ N Sbjct: 909 DLTTNIIE--DGHKVLVFSQFVQMLHIIRSWLNMNEIPHAYLDGSSKDRLEQVDLFNNNP 966 Query: 108 KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFV 167 IP+ + G GLNL + ++ + WW+ Q +R + G + VF Sbjct: 967 DIPVFLISLKAGGTGLNLT-AADYVIHYDPWWNPAVENQATDR-----THRIGQTKQVFS 1020 Query: 168 YYLIAQNTIDELVLQRLRTKSTIQDLLL 195 Y +I +NT++E +L+ K + + ++ Sbjct: 1021 YKMICENTVEEKILKLQEQKKGVAEAVI 1048 >gi|225376574|ref|ZP_03753795.1| hypothetical protein ROSEINA2194_02216 [Roseburia inulinivorans DSM 16841] gi|225211611|gb|EEG93965.1| hypothetical protein ROSEINA2194_02216 [Roseburia inulinivorans DSM 16841] Length = 1098 Score = 147 bits (371), Expect = 9e-34, Method: Composition-based stats. Identities = 38/214 (17%), Positives = 81/214 (37%), Gaps = 26/214 (12%) Query: 1 MKQYHKFQRELYCDLQGENI-----EAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEK 55 + Y +++ L G++ ++ K QL E+ + K Sbjct: 876 LALYDAHVQQMKQMLDGKSEAEFKSNKIQILAELTKLRQLCCDPALLFED---YKGESAK 932 Query: 56 IKALEVIIEKA--NAAPIIVAYHFNSDLARLQKAFPQGRT----------LDKDPCTIQE 103 ++ +I A +++ F + L RL + + +K + Sbjct: 933 VQMCMDLIGNAVHGGHKVLLFSQFTTMLDRLAEQLTKLGIDYYMLTGSVNKEKRMQMVDS 992 Query: 104 WNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKR 163 +N+ +P+ + G GL+L +I++ + WW++ Q +R + G K Sbjct: 993 FNKDDVPVFCISLKAGGTGLSLT-AADIVIHYDPWWNVAVQNQATDR-----AHRIGQKN 1046 Query: 164 AVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 V VY L++Q TI+E ++ K + + +L Sbjct: 1047 VVTVYKLVSQGTIEEKIIDIQEKKKKLAEQVLEG 1080 >gi|114562478|ref|YP_749991.1| SNF2-related protein [Shewanella frigidimarina NCIMB 400] gi|114333771|gb|ABI71153.1| SNF2-related protein [Shewanella frigidimarina NCIMB 400] Length = 1070 Score = 147 bits (371), Expect = 1e-33, Method: Composition-based stats. Identities = 48/205 (23%), Positives = 81/205 (39%), Gaps = 23/205 (11%) Query: 5 HKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEK----IKALE 60 K REL+ +G + +K Q E+ + + K I+ L Sbjct: 857 EKKLRELFAK-KGVSSSHIEFLDALLKLRQACCDPRLVKLEQAQQVKDNAKMTWLIQNLP 915 Query: 61 VIIEKANAAPIIVAYHFNSDLARLQKAFPQ---------GRTLDKDPCTIQEWNEGKIPL 111 +IE+ I++ F LA ++ + G+T D+ I + EG + Sbjct: 916 EMIEE--GRKILIFSQFTGMLALIEDELKRLTISYSKLTGQTRDRQTQ-IDAFQEGDNSV 972 Query: 112 LFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLI 171 + G GLNL + ++ F WW+ ER R + G VFVY LI Sbjct: 973 FLISLKAGGTGLNLT-AADTVIHFDPWWN-----PAAERQATDRAHRIGQLNPVFVYKLI 1026 Query: 172 AQNTIDELVLQRLRTKSTIQDLLLN 196 AQ T++E + + + K + D +L+ Sbjct: 1027 AQGTVEEKIQEMQQHKQGLADSILS 1051 >gi|254239157|ref|ZP_04932480.1| hypothetical protein PACG_05345 [Pseudomonas aeruginosa C3719] gi|126171088|gb|EAZ56599.1| hypothetical protein PACG_05345 [Pseudomonas aeruginosa C3719] Length = 663 Score = 147 bits (371), Expect = 1e-33, Method: Composition-based stats. Identities = 41/183 (22%), Positives = 78/183 (42%), Gaps = 22/183 (12%) Query: 29 TVKCLQLANGAV----YYDEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLA 82 +K Q+ D + + + K+ L ++++ A +++ F S LA Sbjct: 463 LLKLRQVCCDTRLLQRQEDGTRSGRALSSGKLAYLLDMLDELIAEGRRVLLFSQFTSMLA 522 Query: 83 RLQKAFPQ---------GRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILV 133 ++ A Q G T D+ +Q + GK+P+ + G GLNL + ++ Sbjct: 523 LIEDALRQRGVDYVLLTGETRDRR-APVQRFQSGKVPVFLISLKAGGVGLNLT-AADTVI 580 Query: 134 FFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDL 193 + WW+ Q +R + G + VFVY LIA+ T++E + + K+ + D Sbjct: 581 HYDPWWNPAVENQASDR-----AYRIGQDKPVFVYRLIARGTVEEKIQHLQQEKAALADG 635 Query: 194 LLN 196 L + Sbjct: 636 LFS 638 >gi|329904224|ref|ZP_08273705.1| DNA helicase, SNF2/RAD54 family [Oxalobacteraceae bacterium IMCC9480] gi|327548098|gb|EGF32821.1| DNA helicase, SNF2/RAD54 family [Oxalobacteraceae bacterium IMCC9480] Length = 1101 Score = 147 bits (371), Expect = 1e-33, Method: Composition-based stats. Identities = 35/180 (19%), Positives = 72/180 (40%), Gaps = 20/180 (11%) Query: 29 TVKCLQLANGAVYYDEEKHWKEVHDEKIK----ALEVIIEKANAAPIIVAYHFNSDLARL 84 +K Q+ ++ K++ L +IE+ +++ F LA + Sbjct: 904 LLKLRQVCCDPRLVKLDQATNVKESAKLELLLSMLPDMIEE--GRKVLLFSQFTGMLALV 961 Query: 85 QKAFPQGRT--------LDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFS 136 KA + ++ + EG++PL + G GLNL + ++ + Sbjct: 962 AKAVEKAGIPYVLLTGDTTDRATPVRRFQEGEVPLFLISLKAGGVGLNLT-AADTVIHYD 1020 Query: 137 LWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 WW+ Q +R + G ++ VFVY LI +I+E ++ K+ + + +L+ Sbjct: 1021 PWWNPAAENQATDR-----AHRLGQEKPVFVYKLIVAGSIEEKIVALQDKKAALAEGILS 1075 >gi|330808509|ref|YP_004352971.1| Putative non-specific serine/threonine protein [Pseudomonas brassicacearum subsp. brassicacearum NFM421] gi|327376617|gb|AEA67967.1| Putative non-specific serine/threonine protein [Pseudomonas brassicacearum subsp. brassicacearum NFM421] Length = 1096 Score = 147 bits (371), Expect = 1e-33, Method: Composition-based stats. Identities = 40/182 (21%), Positives = 78/182 (42%), Gaps = 20/182 (10%) Query: 29 TVKCLQLANGAVYYDEEKHWKEV--HDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARL 84 +K Q+ + + K + K+ +L ++E+ + I++ F S L+ + Sbjct: 899 LLKLRQVCCDLRLLNTVQTAKALRSGSGKLISLMEMLEELLSEGRKILLFSQFTSMLSLI 958 Query: 85 QKAFPQ---------GRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFF 135 ++ + G T D+ ++E+ GK+ L + G GLNL + ++ F Sbjct: 959 EEELQKRSLTYSLLTGSTTDRR-TPVREFQSGKVSLFLISLKAGGTGLNLT-AADTVIHF 1016 Query: 136 SLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 WW+ Q +R + G + VFVY LIA+ T++E + K+ + LL Sbjct: 1017 DPWWNPAVENQATDR-----AYRIGQNKPVFVYKLIARGTVEEKIQALQEDKAALAGSLL 1071 Query: 196 NA 197 + Sbjct: 1072 DG 1073 >gi|254497098|ref|ZP_05109919.1| DNA helicase [Legionella drancourtii LLAP12] gi|254353678|gb|EET12392.1| DNA helicase [Legionella drancourtii LLAP12] Length = 1091 Score = 147 bits (371), Expect = 1e-33, Method: Composition-based stats. Identities = 39/181 (21%), Positives = 71/181 (39%), Gaps = 19/181 (10%) Query: 29 TVKCLQLANGA-VYYDEEKHWKEVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQ 85 +K Q+ + E K++ L +++ ++V F S L ++ Sbjct: 897 LLKLRQICCDPRLLSLPEATMAHGTSGKLETLMELLDNLVGEGRRVLVFSQFTSMLQLIE 956 Query: 86 KAFPQGRTLD---------KDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFS 136 Q R D ++++ EGK P+ + G GLNL + ++ + Sbjct: 957 NEL-QARHYDYLKLTGQTQNRQAMVEKFQEGKTPVFLISLKAGGTGLNLTR-ADTVIHYD 1014 Query: 137 LWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 WW+ Q +R + G + VFVY LI T++E +L K + D +L+ Sbjct: 1015 PWWNPAVEDQATDR-----THRIGQENPVFVYKLITAGTVEEAILGMQERKRQLVDGILS 1069 Query: 197 A 197 A Sbjct: 1070 A 1070 >gi|116048717|ref|YP_792483.1| helicase [Pseudomonas aeruginosa UCBPP-PA14] gi|115583938|gb|ABJ09953.1| probable helicase [Pseudomonas aeruginosa UCBPP-PA14] Length = 663 Score = 147 bits (370), Expect = 1e-33, Method: Composition-based stats. Identities = 41/183 (22%), Positives = 78/183 (42%), Gaps = 22/183 (12%) Query: 29 TVKCLQLANGAV----YYDEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLA 82 +K Q+ D + + + K+ L ++++ A +++ F S LA Sbjct: 463 LLKLRQVCCDTRLLQRQEDGARSGRALSSGKLAYLLDMLDELIAEGRRVLLFSQFTSMLA 522 Query: 83 RLQKAFPQ---------GRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILV 133 ++ A Q G T D+ +Q + GK+P+ + G GLNL + ++ Sbjct: 523 LIEDALRQRGVDYVLLTGETRDRR-APVQRFQSGKVPVFLISLKAGGVGLNLT-AADTVI 580 Query: 134 FFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDL 193 + WW+ Q +R + G + VFVY LIA+ T++E + + K+ + D Sbjct: 581 HYDPWWNPAVENQASDR-----AYRIGQDKPVFVYRLIARGTVEEKIQHLQQEKAALADG 635 Query: 194 LLN 196 L + Sbjct: 636 LFS 638 >gi|225166221|ref|ZP_03727929.1| Non-specific serine/threonine protein kinase [Opitutaceae bacterium TAV2] gi|224799535|gb|EEG18056.1| Non-specific serine/threonine protein kinase [Opitutaceae bacterium TAV2] Length = 552 Score = 147 bits (370), Expect = 1e-33, Method: Composition-based stats. Identities = 48/209 (22%), Positives = 80/209 (38%), Gaps = 23/209 (11%) Query: 5 HKFQRELY-CDLQGENIEAFNSASKT--VKCLQLANGAVYYDEEKHWKEVHDEKIKALEV 61 + +REL + G + A A+ T ++ Q+ K++A Sbjct: 333 ERSERELLDLETGGASESALRLATLTQLLRLRQICCDPRLV-APDSAAPADSAKLEAFRE 391 Query: 62 IIEKA--NAAPIIVAYHFNSDLARLQKAFPQGR----------TLDKDPCTIQEWN-EGK 108 ++ +A + ++V F S LA L+ F + + T + + +N Sbjct: 392 LLAEAIDDGHRLLVFSQFTSLLALLRAEFDEQQLPYCYLDGTMTPRQRQAEVDRFNTNDD 451 Query: 109 IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVY 168 IPL + G GLNL G + +V F WW+ Q +R + G R V Y Sbjct: 452 IPLFLISLKAGGTGLNLT-GADTVVHFDPWWNPAAEAQATDR-----AHRIGQTRVVTSY 505 Query: 169 YLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 LI T++E VLQ K + + A Sbjct: 506 KLICTGTVEEKVLQLQEQKRALLANVFEA 534 >gi|256827746|ref|YP_003151705.1| DNA/RNA helicase, superfamily II, SNF2 family [Cryptobacterium curtum DSM 15641] gi|256583889|gb|ACU95023.1| DNA/RNA helicase, superfamily II, SNF2 family [Cryptobacterium curtum DSM 15641] Length = 1102 Score = 147 bits (370), Expect = 1e-33, Method: Composition-based stats. Identities = 43/188 (22%), Positives = 74/188 (39%), Gaps = 25/188 (13%) Query: 24 NSASKTVKCLQLANGA--VYYDEEKHWKEVHDEKIKALEVIIEKA--NAAPIIVAYHFNS 79 ++ + QL VY D K+ A+ I+E + +V F S Sbjct: 907 EVLAEITRLRQLCCDPALVYDD-----YRGPASKLDAIADIVEGSRDAGEKTLVFSQFTS 961 Query: 80 DLARLQKAFPQ----------GRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGG 129 L+R+ + + + +N ++P+ + G GLNL G Sbjct: 962 FLSRIAQRLDEMDIAYHTITGATPKQTRVQLVNAFNSDEVPVFLISLKAGGTGLNLT-GA 1020 Query: 130 NILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKST 189 +++V WW+ Q +R + G KR V VY LI +TI+E +++ TK T Sbjct: 1021 SVVVHADPWWNAAAEDQATDR-----AHRIGQKRDVTVYKLIEHDTIEERIVKLQETKHT 1075 Query: 190 IQDLLLNA 197 D ++ A Sbjct: 1076 FVDQIIGA 1083 >gi|117921236|ref|YP_870428.1| SNF2-like protein [Shewanella sp. ANA-3] gi|117613568|gb|ABK49022.1| SNF2-related protein [Shewanella sp. ANA-3] Length = 1082 Score = 147 bits (370), Expect = 1e-33, Method: Composition-based stats. Identities = 45/208 (21%), Positives = 88/208 (42%), Gaps = 27/208 (12%) Query: 5 HKFQRELYCD--LQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKI----KA 58 K REL+ + G +IE ++ +K Q E+ K ++ K+ + Sbjct: 869 EKKIRELFATQGVAGSHIEFLDA---LLKLRQACCDPRLVKLEQAQKVKNNAKLNWLNQN 925 Query: 59 LEVIIEKANAAPIIVAYHFNSDLARLQKAF---------PQGRTLDKDPCTIQEWNEGKI 109 L ++++ I++ F S L +++ G+T + I ++ EG Sbjct: 926 LPEMVQE--GRKILIFSQFTSMLLLIEELLQSLNIDYSKLTGQTRLRQGQ-IDKFQEGDT 982 Query: 110 PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYY 169 P+ + G GLNL + ++ + WW+ +Q +R + G + VFVY Sbjct: 983 PVFLISLKAGGTGLNLT-AADTVIHYDPWWNPAAEKQATDR-----AHRIGQENPVFVYK 1036 Query: 170 LIAQNTIDELVLQRLRTKSTIQDLLLNA 197 LIA+ T++E + + + K + D +L Sbjct: 1037 LIAEGTVEEKIQEMQQHKQGLADSILEG 1064 >gi|254245052|ref|ZP_04938374.1| hypothetical protein PA2G_05937 [Pseudomonas aeruginosa 2192] gi|126198430|gb|EAZ62493.1| hypothetical protein PA2G_05937 [Pseudomonas aeruginosa 2192] Length = 663 Score = 147 bits (370), Expect = 1e-33, Method: Composition-based stats. Identities = 41/183 (22%), Positives = 78/183 (42%), Gaps = 22/183 (12%) Query: 29 TVKCLQLANGAV----YYDEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLA 82 +K Q+ D + + + K+ L ++++ A +++ F S LA Sbjct: 463 LLKLRQVCCDTRLLQRQEDGARSGRALSSGKLAYLLDMLDELIAEGRRVLLFSQFTSMLA 522 Query: 83 RLQKAFPQ---------GRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILV 133 ++ A Q G T D+ +Q + GK+P+ + G GLNL + ++ Sbjct: 523 LIEDALRQRGVDYVLLTGETRDRR-APVQRFQSGKVPVFLISLKAGGVGLNLT-AADTVI 580 Query: 134 FFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDL 193 + WW+ Q +R + G + VFVY LIA+ T++E + + K+ + D Sbjct: 581 HYDPWWNPAVENQASDR-----AYRIGQDKPVFVYRLIARGTVEEKIQHLQQEKAALADG 635 Query: 194 LLN 196 L + Sbjct: 636 LFS 638 >gi|266620561|ref|ZP_06113496.1| SNF2 family protein [Clostridium hathewayi DSM 13479] gi|288867854|gb|EFD00153.1| SNF2 family protein [Clostridium hathewayi DSM 13479] Length = 1154 Score = 147 bits (370), Expect = 1e-33, Method: Composition-based stats. Identities = 39/212 (18%), Positives = 82/212 (38%), Gaps = 30/212 (14%) Query: 3 QYHKFQRELYCDLQGEN-----IEAFNSASKTVKCLQLAN--GAVYYDEEKHWKEVHDEK 55 Y ++L L ++ + ++ QL VY + K Sbjct: 925 IYEARVQKLLDSLSKQSQEEFRVGKLQILAELTHLRQLCCDPSLVYENYNGGA-----AK 979 Query: 56 IKALEVIIEKA--NAAPIIVAYHFNSDLARLQKAFPQ----------GRTLDKDPCTIQE 103 + +++ A I++ F S L ++K + + +K ++ Sbjct: 980 VDTCVELVKNAVEAGNKILLFSQFTSMLDIIRKRLDEEEIGYYILTGAVSKEKRSELVRA 1039 Query: 104 WNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKR 163 +NE P+ + G GLNL +I++ F WW+ Q +R + G ++ Sbjct: 1040 FNEDDTPVFLISLKAGGTGLNLT-AASIVIHFDPWWNQAAQNQATDR-----AHRIGQQQ 1093 Query: 164 AVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 V VY LI ++T++E +L+ K+ + + ++ Sbjct: 1094 VVTVYKLIMKDTLEEKILEMQEKKAGLSEEII 1125 >gi|15595996|ref|NP_249490.1| helicase [Pseudomonas aeruginosa PAO1] gi|218893257|ref|YP_002442126.1| putative helicase [Pseudomonas aeruginosa LESB58] gi|9946691|gb|AAG04188.1|AE004515_4 probable helicase [Pseudomonas aeruginosa PAO1] gi|218773485|emb|CAW29297.1| probable helicase [Pseudomonas aeruginosa LESB58] Length = 663 Score = 147 bits (370), Expect = 1e-33, Method: Composition-based stats. Identities = 41/183 (22%), Positives = 78/183 (42%), Gaps = 22/183 (12%) Query: 29 TVKCLQLANGAV----YYDEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLA 82 +K Q+ D + + + K+ L ++++ A +++ F S LA Sbjct: 463 LLKLRQVCCDTRLLQRQEDGARSGRALSSGKLAYLLDMLDELIAEGRRVLLFSQFTSMLA 522 Query: 83 RLQKAFPQ---------GRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILV 133 ++ A Q G T D+ +Q + GK+P+ + G GLNL + ++ Sbjct: 523 LIEDALRQRGVDYVLLTGETRDRR-APVQRFQSGKVPVFLISLKAGGVGLNLT-AADTVI 580 Query: 134 FFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDL 193 + WW+ Q +R + G + VFVY LIA+ T++E + + K+ + D Sbjct: 581 HYDPWWNPAVENQASDR-----AYRIGQDKPVFVYRLIARGTVEEKIQHLQQEKAALADG 635 Query: 194 LLN 196 L + Sbjct: 636 LFS 638 >gi|227546637|ref|ZP_03976686.1| helicase [Bifidobacterium longum subsp. infantis ATCC 55813] gi|227212954|gb|EEI80833.1| helicase [Bifidobacterium longum subsp. infantis ATCC 55813] Length = 1394 Score = 147 bits (370), Expect = 1e-33, Method: Composition-based stats. Identities = 42/215 (19%), Positives = 79/215 (36%), Gaps = 30/215 (13%) Query: 2 KQYHKFQRELYCDLQGENIEAFNS-----ASKTVKCLQLANGA--VYYDEEKHWKEVHDE 54 K Y ++ L L+ FN+ ++ K Q+ +Y D + Sbjct: 1157 KLYAAHEQRLRMQLEHSEEADFNTSKIRILAELTKLRQICCDPRLLYADAKDQ-----SA 1211 Query: 55 KIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFP----------QGRTLDKDPCTIQ 102 K+ A+ ++E ++ F S L + + F K + Sbjct: 1212 KLAAITDLVETCVNEGKKALIFSQFTSFLDLIAERFDAQGLRYYTITGSTPKKKRLELVD 1271 Query: 103 EWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFK 162 ++N P + GLNL G ++++ WW+ Q +R + G Sbjct: 1272 QFNADDTPAFLISLKAGNTGLNLT-GASVVIHADPWWNAAAQDQATDR-----AHRIGQT 1325 Query: 163 RAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 V VY ++A++TI+E +L+ TKS + +A Sbjct: 1326 EDVNVYQVVAKDTIEERILELQHTKSELARQFTDA 1360 >gi|317484163|ref|ZP_07943092.1| SNF2 family domain-containing protein [Bilophila wadsworthia 3_1_6] gi|316924512|gb|EFV45669.1| SNF2 family domain-containing protein [Bilophila wadsworthia 3_1_6] Length = 1343 Score = 147 bits (370), Expect = 1e-33, Method: Composition-based stats. Identities = 45/212 (21%), Positives = 81/212 (38%), Gaps = 27/212 (12%) Query: 4 YHKFQRELYCDLQGENIE------AFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIK 57 Y +R L+ E F+ ++ +K + V D + K+ Sbjct: 1125 YEALRRNALASLEAAKQEDAEGSQKFSILTELMKLRRACCAPVLIDPG---TSLTGAKLS 1181 Query: 58 ALEVIIEKA--NAAPIIVAYHFN---SDLARLQKA------FPQGRTLDKDPCT-IQEWN 105 A ++E+ +V F S+ RL A + G T D++ + + Sbjct: 1182 AFMELVEELVRGGHKALVFSQFVGCLSEARRLLDAAGYGYQYLDGSTPDRERQAAVAAFQ 1241 Query: 106 EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 GK L + G GLNL + ++ WW+ Q +R + G +R V Sbjct: 1242 SGKGDLFLISLKAGGQGLNLT-AADYVIHLDPWWNPAVEDQASDR-----AYRLGQQRPV 1295 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 VY L+A+ T++E +L+ R+K + +L Sbjct: 1296 TVYRLVARGTVEESILKLHRSKRALAADVLEG 1327 >gi|290962297|ref|YP_003493479.1| hypothetical protein SCAB_79891 [Streptomyces scabiei 87.22] gi|260651823|emb|CBG74949.1| putative helicase (fragment) [Streptomyces scabiei 87.22] Length = 953 Score = 146 bits (369), Expect = 1e-33, Method: Composition-based stats. Identities = 42/212 (19%), Positives = 82/212 (38%), Gaps = 25/212 (11%) Query: 3 QYHKFQRELYCDLQGENIEAFNSASKTVKCL----QLANG-AVYYDEEKHWKEVHDEKIK 57 Y RE ++ + +K L Q+ N A Y EE+ K + Sbjct: 726 LYEALVRETMAEI--ARADGMERRGLIMKLLTGLKQICNHPAQYLKEERPRVPGRSGKTE 783 Query: 58 ALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFP----------QGRTLDKDPCTIQEWN 105 L+ +++ + A ++V + L++ G + + ++ + Sbjct: 784 LLDELLDTILSEGAGVLVFTQYVRMARLLERHLAARGVPTLFLHGGTPVTERESMVERFQ 843 Query: 106 EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 G++P+ + G GLNL + +V + WW+ Q +R + G R V Sbjct: 844 AGEVPVFLLSLKAAGTGLNLTRAEH-VVHYDRWWNPAVEAQATDR-----AYRIGQTRPV 897 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 V+ LIA+ TI++ + L +K + D +L Sbjct: 898 QVHRLIAEGTIEDRIADMLLSKRKLADAVLGG 929 >gi|24373219|ref|NP_717262.1| Snf2 family protein [Shewanella oneidensis MR-1] gi|24347445|gb|AAN54706.1|AE015611_4 Snf2 family protein [Shewanella oneidensis MR-1] Length = 1070 Score = 146 bits (369), Expect = 1e-33, Method: Composition-based stats. Identities = 46/208 (22%), Positives = 87/208 (41%), Gaps = 27/208 (12%) Query: 5 HKFQRELYCD--LQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKI----KA 58 K REL+ + G +IE ++ +K Q E+ K ++ K+ + Sbjct: 857 EKKIRELFATQGVAGSHIEFLDA---LLKLRQACCDPRLVKLEQAQKVKNNAKLNWLSQN 913 Query: 59 LEVIIEKANAAPIIVAYHFNSDLARLQKAF---------PQGRTLDKDPCTIQEWNEGKI 109 L ++++ I++ F S L +++ G+T + I ++ EG Sbjct: 914 LPEMVQE--GRKILIFSQFTSMLILIEELLQSLEIDYSKLTGQTRLRQVQ-IDKFQEGDT 970 Query: 110 PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYY 169 P+ + G GLNL + ++ + WW+ ER R + G + VFVY Sbjct: 971 PVFLISLKAGGTGLNLT-AADTVIHYDPWWN-----PAAERQATDRAHRIGQENPVFVYK 1024 Query: 170 LIAQNTIDELVLQRLRTKSTIQDLLLNA 197 LIA+ T++E + + + K + D +L Sbjct: 1025 LIAEGTVEEKIQEMQQHKQGLADSILEG 1052 >gi|317484825|ref|ZP_07943719.1| SNF2 family domain-containing protein [Bilophila wadsworthia 3_1_6] gi|316923919|gb|EFV45111.1| SNF2 family domain-containing protein [Bilophila wadsworthia 3_1_6] Length = 1073 Score = 146 bits (369), Expect = 2e-33, Method: Composition-based stats. Identities = 37/207 (17%), Positives = 79/207 (38%), Gaps = 22/207 (10%) Query: 5 HKFQRELYCDLQGENIEAF--NSASKTVKCLQLANGA--VYYDEEKHWK-EVHDEKIKAL 59 K + ++ D++ + + + +K Q+ + D + K +A Sbjct: 853 RKLRDQVLADVESKGMAKSQMSILDALLKLRQICCHPRLLKVDMPGFSTGSLPSGKFEAF 912 Query: 60 EVIIEK--ANAAPIIVAYHFNSDLARLQK---------AFPQGRTLDKDPCTIQEWNEGK 108 + +I ++V F L ++ + G + D+ + N + Sbjct: 913 KDMIFDVVEGGHKVLVFSQFVQMLQIIRGWLQLTDIPFCYLDGTSKDRLDQVDRFNNSPE 972 Query: 109 IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVY 168 IP+ + G G+NL + ++ + WW+ Q +R + G R VF Y Sbjct: 973 IPIFLISLKAGGTGINLT-SADYVIHYDPWWNPAVESQATDR-----THRIGQTRQVFSY 1026 Query: 169 YLIAQNTIDELVLQRLRTKSTIQDLLL 195 LI QNT++E +L+ K + + ++ Sbjct: 1027 KLICQNTVEEKILKLQEMKRGVAEAVI 1053 >gi|194364294|ref|YP_002026904.1| Non-specific serine/threonine protein kinase [Stenotrophomonas maltophilia R551-3] gi|194347098|gb|ACF50221.1| Non-specific serine/threonine protein kinase [Stenotrophomonas maltophilia R551-3] Length = 1104 Score = 146 bits (369), Expect = 2e-33, Method: Composition-based stats. Identities = 39/203 (19%), Positives = 79/203 (38%), Gaps = 18/203 (8%) Query: 7 FQRELYCDLQGENIEAFNSASK--TVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIE 64 ++++ + + + +K Q+ E + K++ L ++ Sbjct: 871 MEKQVREAISDSGLARSHIRVLDALLKLRQVCCDPRLLPGETPARNAGSAKLELLREMLP 930 Query: 65 KA--NAAPIIVAYHFNSDLARLQKAFPQ----GRTLDKDPCT----IQEWNEGKIPLLFA 114 I++ F LA + +A TL D +Q + +G++PL Sbjct: 931 SMVEEGRRILLFSQFTGMLALIAQALDGLGLAYVTLTGDTQDRVTPVQRFMQGEVPLFLI 990 Query: 115 HPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQN 174 + G GLNL + ++ F WW+ Q +R + G ++ VFVY LIA Sbjct: 991 SLKAGGVGLNLT-AADTVIHFDPWWNPAAENQASDR-----AHRIGQQQPVFVYRLIAAG 1044 Query: 175 TIDELVLQRLRTKSTIQDLLLNA 197 +I+E + + K+ + + +L Sbjct: 1045 SIEERIAELQERKAMLAESILEG 1067 >gi|296454690|ref|YP_003661833.1| SNF2-like protein [Bifidobacterium longum subsp. longum JDM301] gi|296184121|gb|ADH01003.1| SNF2-related protein [Bifidobacterium longum subsp. longum JDM301] Length = 1420 Score = 146 bits (369), Expect = 2e-33, Method: Composition-based stats. Identities = 42/215 (19%), Positives = 79/215 (36%), Gaps = 30/215 (13%) Query: 2 KQYHKFQRELYCDLQGENIEAFNS-----ASKTVKCLQLANGA--VYYDEEKHWKEVHDE 54 K Y ++ L L+ FN+ ++ K Q+ +Y D + Sbjct: 1183 KLYAAHEQRLRMQLEHSEEADFNTSKIRILAELTKLRQICCDPRLLYADAKDQ-----SA 1237 Query: 55 KIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFP----------QGRTLDKDPCTIQ 102 K+ A+ ++E ++ F S L + + F K + Sbjct: 1238 KLAAITELVETCVNEGKKALIFSQFTSFLDLIAERFDAQGLRYYTITGSTPKKKRLELVD 1297 Query: 103 EWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFK 162 ++N P + GLNL G ++++ WW+ Q +R + G Sbjct: 1298 QFNADDTPAFLISLKAGNTGLNLT-GASVVIHADPWWNAAAQDQATDR-----AHRIGQT 1351 Query: 163 RAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 V VY ++A++TI+E +L+ TKS + +A Sbjct: 1352 EDVNVYQVVAKDTIEERILELQHTKSELARQFTDA 1386 >gi|213691499|ref|YP_002322085.1| SNF2-related protein [Bifidobacterium longum subsp. infantis ATCC 15697] gi|213522960|gb|ACJ51707.1| SNF2-related protein [Bifidobacterium longum subsp. infantis ATCC 15697] gi|320457574|dbj|BAJ68195.1| putative helicase [Bifidobacterium longum subsp. infantis ATCC 15697] Length = 1423 Score = 146 bits (369), Expect = 2e-33, Method: Composition-based stats. Identities = 42/215 (19%), Positives = 79/215 (36%), Gaps = 30/215 (13%) Query: 2 KQYHKFQRELYCDLQGENIEAFNS-----ASKTVKCLQLANGA--VYYDEEKHWKEVHDE 54 K Y ++ L L+ FN+ ++ K Q+ +Y D + Sbjct: 1186 KLYAAHEQRLRMQLEHSEEADFNTSKIRILAELTKLRQICCDPRLLYADAKDQ-----SA 1240 Query: 55 KIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFP----------QGRTLDKDPCTIQ 102 K+ A+ ++E ++ F S L + + F K + Sbjct: 1241 KLAAITELVETCVNEGKKALIFSQFTSFLDLIAERFDAQGLRYYTITGSTPKKKRLELVD 1300 Query: 103 EWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFK 162 ++N P + GLNL G ++++ WW+ Q +R + G Sbjct: 1301 QFNADDTPAFLISLKAGNTGLNLT-GASVVIHADPWWNAAAQDQATDR-----AHRIGQT 1354 Query: 163 RAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 V VY ++A++TI+E +L+ TKS + +A Sbjct: 1355 EDVNVYQVVAKDTIEERILELQHTKSELARQFTDA 1389 >gi|317482426|ref|ZP_07941443.1| SNF2 family domain-containing protein [Bifidobacterium sp. 12_1_47BFAA] gi|316916086|gb|EFV37491.1| SNF2 family domain-containing protein [Bifidobacterium sp. 12_1_47BFAA] Length = 1394 Score = 146 bits (369), Expect = 2e-33, Method: Composition-based stats. Identities = 42/215 (19%), Positives = 79/215 (36%), Gaps = 30/215 (13%) Query: 2 KQYHKFQRELYCDLQGENIEAFNS-----ASKTVKCLQLANGA--VYYDEEKHWKEVHDE 54 K Y ++ L L+ FN+ ++ K Q+ +Y D + Sbjct: 1157 KLYAAHEQRLRMQLEHSEEADFNTSKIRILAELTKLRQICCDPRLLYADAKDQ-----SA 1211 Query: 55 KIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFP----------QGRTLDKDPCTIQ 102 K+ A+ ++E ++ F S L + + F K + Sbjct: 1212 KLAAITELVETCVNEGKKALIFSQFTSFLDLIAERFDAQGLRYYTITGSTPKKKRLELVD 1271 Query: 103 EWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFK 162 ++N P + GLNL G ++++ WW+ Q +R + G Sbjct: 1272 QFNADDTPAFLISLKAGNTGLNLT-GASVVIHADPWWNAAAQDQATDR-----AHRIGQT 1325 Query: 163 RAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 V VY ++A++TI+E +L+ TKS + +A Sbjct: 1326 EDVNVYQVVAKDTIEERILELQHTKSELARQFTDA 1360 >gi|23466281|ref|NP_696884.1| helicase [Bifidobacterium longum NCC2705] gi|322689764|ref|YP_004209498.1| helicase [Bifidobacterium longum subsp. infantis 157F] gi|322691713|ref|YP_004221283.1| helicase [Bifidobacterium longum subsp. longum JCM 1217] gi|23327031|gb|AAN25520.1| possible helicase [Bifidobacterium longum NCC2705] gi|320456569|dbj|BAJ67191.1| putative helicase [Bifidobacterium longum subsp. longum JCM 1217] gi|320461100|dbj|BAJ71720.1| putative helicase [Bifidobacterium longum subsp. infantis 157F] Length = 1394 Score = 146 bits (368), Expect = 2e-33, Method: Composition-based stats. Identities = 42/215 (19%), Positives = 79/215 (36%), Gaps = 30/215 (13%) Query: 2 KQYHKFQRELYCDLQGENIEAFNS-----ASKTVKCLQLANGA--VYYDEEKHWKEVHDE 54 K Y ++ L L+ FN+ ++ K Q+ +Y D + Sbjct: 1157 KLYAAHEQRLRMQLEHSEEADFNTSKIRILAELTKLRQICCDPRLLYADAKDQ-----SA 1211 Query: 55 KIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFP----------QGRTLDKDPCTIQ 102 K+ A+ ++E ++ F S L + + F K + Sbjct: 1212 KLAAITELVETCVNEGKKALIFSQFTSFLDLIAERFDAQGLRYYTITGSTPKKKRLELVD 1271 Query: 103 EWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFK 162 ++N P + GLNL G ++++ WW+ Q +R + G Sbjct: 1272 QFNADDTPAFLISLKAGNTGLNLT-GASVVIHADPWWNAAAQDQATDR-----AHRIGQT 1325 Query: 163 RAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 V VY ++A++TI+E +L+ TKS + +A Sbjct: 1326 EDVNVYQVVAKDTIEERILELQHTKSELARQFTDA 1360 >gi|295092105|emb|CBK78212.1| Superfamily II DNA/RNA helicases, SNF2 family [Clostridium cf. saccharolyticum K10] Length = 1085 Score = 146 bits (368), Expect = 2e-33, Method: Composition-based stats. Identities = 41/209 (19%), Positives = 84/209 (40%), Gaps = 24/209 (11%) Query: 1 MKQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 ++ +++ +LQ + ++ + Q+ E K++ Sbjct: 870 VRLMESLEKQSDEELQKGKL---QILAELTRLRQICCAPEMLYEN---YSETSCKVETCM 923 Query: 61 VIIEKA--NAAPIIVAYHFNSDLARLQKAFPQGRT----------LDKDPCTIQEWNEGK 108 +I +A I++ F S L+K Q + + +++N G Sbjct: 924 ELIHQAMSGNHKILLFSQFTSVFPILEKRLLQEKIPYYELTGQTSKENRMRMTEQFNSGD 983 Query: 109 IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVY 168 +P+ + G GLNL +I++ F WW+L Q +R + G ++ V V+ Sbjct: 984 VPVFLISLKAGGTGLNLT-AASIVIHFDPWWNLAAQNQATDR-----AHRIGQEKQVTVF 1037 Query: 169 YLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 LIAQNTI+E +++ + K + +L+ Sbjct: 1038 KLIAQNTIEEKIIKLQQEKQKLSSQILDG 1066 >gi|189440776|ref|YP_001955857.1| superfamily II DNA/RNA helicase [Bifidobacterium longum DJO10A] gi|189429211|gb|ACD99359.1| Superfamily II DNA/RNA helicase [Bifidobacterium longum DJO10A] Length = 1394 Score = 146 bits (368), Expect = 2e-33, Method: Composition-based stats. Identities = 42/215 (19%), Positives = 79/215 (36%), Gaps = 30/215 (13%) Query: 2 KQYHKFQRELYCDLQGENIEAFNS-----ASKTVKCLQLANGA--VYYDEEKHWKEVHDE 54 K Y ++ L L+ FN+ ++ K Q+ +Y D + Sbjct: 1157 KLYAAHEQRLRMQLEHSEEADFNTSKIRILAELTKLRQICCDPRLLYADAKDQ-----SA 1211 Query: 55 KIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFP----------QGRTLDKDPCTIQ 102 K+ A+ ++E ++ F S L + + F K + Sbjct: 1212 KLAAITELVETCVNEGKKALIFSQFTSFLDLIAERFDAQGLRYYTITGSTPKKKRLELVD 1271 Query: 103 EWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFK 162 ++N P + GLNL G ++++ WW+ Q +R + G Sbjct: 1272 QFNADDTPAFLISLKAGNTGLNLT-GASVVIHADPWWNAAAQDQATDR-----AHRIGQT 1325 Query: 163 RAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 V VY ++A++TI+E +L+ TKS + +A Sbjct: 1326 EDVNVYQVVAKDTIEERILELQHTKSELARQFTDA 1360 >gi|291547356|emb|CBL20464.1| Superfamily II DNA/RNA helicases, SNF2 family [Ruminococcus sp. SR1/5] Length = 1130 Score = 146 bits (368), Expect = 2e-33, Method: Composition-based stats. Identities = 40/231 (17%), Positives = 83/231 (35%), Gaps = 49/231 (21%) Query: 5 HKFQRELYCDLQGENIEAFNS------------------------ASKTVKCLQLAN--G 38 K +++++ L+ E E + + ++ + Q+ G Sbjct: 892 DKLEKDMFSPLESEQKELYEAHTERFRLMLGMQSDAEFRTSKLQILAEITRLRQICCYPG 951 Query: 39 AVYYDEEKHWKEVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQKAFPQGRT--- 93 VY + + K++ +++ A I++ F + L L + + Sbjct: 952 LVYEGYKGN-----SSKLEMCMELVQNAVNGGHKILLFSQFTTMLDVLAVRLKKAKVSFY 1006 Query: 94 -------LDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 +K + +NE + + G GLNL +I++ + WW+L Q Sbjct: 1007 MLTGSTSKEKRAQMVHAFNEDDTSVFCISLKAGGTGLNLT-AADIVIHYDPWWNLAVQNQ 1065 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 +R + G + V VY L ++TI+E + K + D +LN Sbjct: 1066 ATDR-----AHRIGQQNVVSVYRLFMKDTIEERIRALQERKRELADEILNG 1111 >gi|326774662|ref|ZP_08233927.1| SNF2-related protein [Streptomyces cf. griseus XylebKG-1] gi|326654995|gb|EGE39841.1| SNF2-related protein [Streptomyces cf. griseus XylebKG-1] Length = 1039 Score = 146 bits (368), Expect = 2e-33, Method: Composition-based stats. Identities = 41/213 (19%), Positives = 80/213 (37%), Gaps = 21/213 (9%) Query: 3 QYHKFQRELYCDLQGENIEAFNSAS--KTVKCLQLANG-AVYYDEEKHWKEVHDEKIKAL 59 Y RE ++ + Q+ N A Y EE+ K++ L Sbjct: 812 LYEAVVRETLAEISAADGFERRGLVMKLLTALKQICNHPAQYLKEEQPRIADRSGKVELL 871 Query: 60 EVIIEK--ANAAPIIVAYHFNSDLARLQKAFP----------QGRTLDKDPCTIQEWNEG 107 + +++ A ++V + L++ G + + + + G Sbjct: 872 DELLDTILAERGSVLVFTQYVQMARLLEEHLAARGVATQFLHGGTPVARREEMVNRFQSG 931 Query: 108 KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFV 167 + P+ + G GLNL G+ +V F WW+ Q +R + G + V V Sbjct: 932 EAPVFLLSLKAAGTGLNLTRAGH-VVHFDRWWNPAVEAQATDR-----AYRIGQTQPVQV 985 Query: 168 YYLIAQNTIDELVLQRLRTKSTIQDLLLNALKK 200 + LIA+ TI++ + + L K + D +L + + Sbjct: 986 HRLIAEGTIEDRIAEMLTRKQGLADAVLGSGEA 1018 >gi|71909481|ref|YP_287068.1| SNF2-related:helicase, C-terminal:SWIM Zn-finger [Dechloromonas aromatica RCB] gi|71849102|gb|AAZ48598.1| SNF2-related:Helicase, C-terminal:SWIM Zn-finger [Dechloromonas aromatica RCB] Length = 1091 Score = 146 bits (368), Expect = 2e-33, Method: Composition-based stats. Identities = 35/210 (16%), Positives = 73/210 (34%), Gaps = 22/210 (10%) Query: 3 QYHKFQRELYCDLQGENIEAFNS------ASKTVKCLQLANGAVYYDEEKHWKEVHDEKI 56 Y + + ++ E + +K Q+ K K+ Sbjct: 865 LYETVRAAMDAKVRDEIASKGFARSQIVILDALLKLRQVCCDPRLVKASSARKVTERAKL 924 Query: 57 KALEVIIEKA--NAAPIIVAYHFNSDLARLQKAFPQGRTLD--------KDPCTIQEWNE 106 L ++ + ++V F S LA ++ + I+ + + Sbjct: 925 DLLMAMLPELVDEGRRVLVFSQFTSMLALIEHELDKAGITYVTLTGDTVDREVPIRRFQD 984 Query: 107 GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVF 166 ++P+ + G GLNL + ++ + WW+ Q +R + G + VF Sbjct: 985 CEVPIFLISLKAGGVGLNLT-AADTVIHYDPWWNPAVENQATDR-----AHRLGQDKPVF 1038 Query: 167 VYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 VY LI +I+E +L K+ + +L+ Sbjct: 1039 VYKLIVSGSIEEKILALQERKAELAAGILS 1068 >gi|239621668|ref|ZP_04664699.1| conserved hypothetical protein [Bifidobacterium longum subsp. infantis CCUG 52486] gi|239515543|gb|EEQ55410.1| conserved hypothetical protein [Bifidobacterium longum subsp. infantis CCUG 52486] Length = 1388 Score = 146 bits (368), Expect = 2e-33, Method: Composition-based stats. Identities = 42/215 (19%), Positives = 79/215 (36%), Gaps = 30/215 (13%) Query: 2 KQYHKFQRELYCDLQGENIEAFNS-----ASKTVKCLQLANGA--VYYDEEKHWKEVHDE 54 K Y ++ L L+ FN+ ++ K Q+ +Y D + Sbjct: 1151 KLYAAHEQRLRMQLEHSEEADFNTSKIRILAELTKLRQICCDPRLLYADAKDQ-----SA 1205 Query: 55 KIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFP----------QGRTLDKDPCTIQ 102 K+ A+ ++E ++ F S L + + F K + Sbjct: 1206 KLAAITELVETCVNEGKKALIFSQFTSFLDLIAERFDAQGLRYYTITGSTPKKKRLELVD 1265 Query: 103 EWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFK 162 ++N P + GLNL G ++++ WW+ Q +R + G Sbjct: 1266 QFNADDTPAFLISLKAGNTGLNLT-GASVVIHADPWWNAAAQDQATDR-----AHRIGQT 1319 Query: 163 RAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 V VY ++A++TI+E +L+ TKS + +A Sbjct: 1320 EDVNVYQVVAKDTIEERILELQHTKSELARQFTDA 1354 >gi|318059790|ref|ZP_07978513.1| SNF2-like protein [Streptomyces sp. SA3_actG] gi|318075191|ref|ZP_07982523.1| SNF2-like protein [Streptomyces sp. SA3_actF] Length = 951 Score = 145 bits (367), Expect = 2e-33, Method: Composition-based stats. Identities = 36/214 (16%), Positives = 85/214 (39%), Gaps = 21/214 (9%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASK--TVKCLQLANGAVYYDEEKHWK-EVHDEKIKA 58 + Y + R +++ A + Q+ N + +E + K+ Sbjct: 724 RLYEEQVRATMAEIRSAKGIARSGLVLRLLTGLKQICNHPAQFLKEGEPELSGRSGKLAL 783 Query: 59 LEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQ----------GRTLDKDPCTIQEWNE 106 L+ +++ A ++V + + L++ + G + + ++ + + Sbjct: 784 LDELLDTILAADGAVLVFTQYVAMARLLERHLRERGIAAQLLHGGTPVPRREEMVRRFQD 843 Query: 107 GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVF 166 G++P+ + G GLNL + +V + WW+ Q +R + G R V Sbjct: 844 GEVPVFLLSLKAAGTGLNLTR-ADHVVHYDRWWNPAVEAQATDR-----AHRIGQTRPVQ 897 Query: 167 VYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKK 200 V+ LIA+ TI++ + + +K + D +L ++ Sbjct: 898 VHRLIAEGTIEDRIAALMESKRELADAVLGGGER 931 >gi|302523347|ref|ZP_07275689.1| SNF2/RAD54 family helicase [Streptomyces sp. SPB78] gi|302432242|gb|EFL04058.1| SNF2/RAD54 family helicase [Streptomyces sp. SPB78] Length = 968 Score = 145 bits (367), Expect = 2e-33, Method: Composition-based stats. Identities = 36/214 (16%), Positives = 85/214 (39%), Gaps = 21/214 (9%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASK--TVKCLQLANGAVYYDEEKHWK-EVHDEKIKA 58 + Y + R +++ A + Q+ N + +E + K+ Sbjct: 741 RLYEEQVRATMAEIRSAKGIARSGLVLRLLTGLKQICNHPAQFLKEGEPELSGRSGKLAL 800 Query: 59 LEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQ----------GRTLDKDPCTIQEWNE 106 L+ +++ A ++V + + L++ + G + + ++ + + Sbjct: 801 LDELLDTILAADGAVLVFTQYVAMARLLERHLRERGIAAQLLHGGTPVPRREEMVRRFQD 860 Query: 107 GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVF 166 G++P+ + G GLNL + +V + WW+ Q +R + G R V Sbjct: 861 GEVPVFLLSLKAAGTGLNLTR-ADHVVHYDRWWNPAVEAQATDR-----AHRIGQTRPVQ 914 Query: 167 VYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKK 200 V+ LIA+ TI++ + + +K + D +L ++ Sbjct: 915 VHRLIAEGTIEDRIAALMESKRELADAVLGGGER 948 >gi|255038325|ref|YP_003088946.1| Non-specific serine/threonine protein kinase [Dyadobacter fermentans DSM 18053] gi|254951081|gb|ACT95781.1| Non-specific serine/threonine protein kinase [Dyadobacter fermentans DSM 18053] Length = 982 Score = 145 bits (367), Expect = 3e-33, Method: Composition-based stats. Identities = 46/210 (21%), Positives = 82/210 (39%), Gaps = 20/210 (9%) Query: 2 KQYHKFQ---RELYCDLQGENIEAFNSASKT---VKCLQLANGAVYYDEE-KHWKEVHDE 54 K Y + + R L + + + QLAN V D E H ++ Sbjct: 761 KAYEEAKAYYRNLILQSIDSEGMSKSQLVVLQGLTRLRQLANHPVMVDPEYAHDSGKFED 820 Query: 55 KIKALEVIIEKANAAPIIVAYHFNSDLAR-------LQKAFPQGRTLDKDPCTIQEWNEG 107 + L+ ++ + + I Y + DL R + A+ G T D+ N+ Sbjct: 821 VLYKLQTVMSEDHKILIFSQYIKHLDLFRHYLDEKEINYAYLDGATRDRQEQVESFQNDE 880 Query: 108 KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFV 167 I + + G GLNL + + WW+ Q ++R + G R VF Sbjct: 881 NIKIFLISLKAGGLGLNLT-AADYVFILDPWWNPAIEAQAVDR-----AHRIGQDRTVFT 934 Query: 168 YYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 Y I +N+++E +L R+K + D L+++ Sbjct: 935 YKFITKNSVEEKILALQRSKKQLADDLISS 964 >gi|187919690|ref|YP_001888721.1| Non-specific serine/threonine protein kinase [Burkholderia phytofirmans PsJN] gi|187718128|gb|ACD19351.1| Non-specific serine/threonine protein kinase [Burkholderia phytofirmans PsJN] Length = 1155 Score = 145 bits (367), Expect = 3e-33, Method: Composition-based stats. Identities = 40/199 (20%), Positives = 86/199 (43%), Gaps = 22/199 (11%) Query: 9 RELYCDLQGENIEAFNSASKTVKCLQLA--NGAVYYDEEKHWKEVHDEKIKALEVIIEKA 66 R++ CD + ++ +A++ + + G + D + L +IE+ Sbjct: 940 RQVCCDPRL--VKTLKAAAEANDVPEKSDRTGKIEKGARAMRSAKLDLLLSMLPELIEE- 996 Query: 67 NAAPIIVAYHFNSDLARLQKAFPQ---------GRTLDKDPCTIQEWNEGKIPLLFAHPA 117 +++ F L+ + +A + G T D+ ++ + +G++PL Sbjct: 997 -GRRVLLFSQFTGMLSLIAQALEEVGIPYMMLTGDTTDRV-TPVERFQKGEVPLFLISLK 1054 Query: 118 SCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 + G GLNL + ++ + WW+ Q +R + G + VFVY LIA +I+ Sbjct: 1055 AGGVGLNLT-AADTVIHYDPWWNPAAENQATDR-----AHRLGQDKPVFVYKLIAAGSIE 1108 Query: 178 ELVLQRLRTKSTIQDLLLN 196 E +++ K+ + D +L+ Sbjct: 1109 EKIVELQEQKAGLADSILS 1127 >gi|116623003|ref|YP_825159.1| SNF2-like protein [Candidatus Solibacter usitatus Ellin6076] gi|116226165|gb|ABJ84874.1| SNF2-related protein [Candidatus Solibacter usitatus Ellin6076] Length = 1073 Score = 145 bits (366), Expect = 3e-33, Method: Composition-based stats. Identities = 46/211 (21%), Positives = 80/211 (37%), Gaps = 25/211 (11%) Query: 2 KQYHKFQR----ELYCDLQGENI--EAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEK 55 K Y + ++ L +Q + I + ++ Q A D + + K Sbjct: 851 KHYDELRKHYRENLLLRVQQQGIGKNKMHVLEALLRLRQAACHPGLLDAAR--IQEPSAK 908 Query: 56 IKALEV-IIE-KANAAPIIVAYHFNS---------DLARLQKAFPQGRTLDKDPCTIQEW 104 + L + E + +V F S D A ++ + G T D+ Sbjct: 909 LDVLLDQLAELREEGHKALVFSQFTSLLAIVRDRLDAAGVRYEYLDGSTRDRQARVDTFQ 968 Query: 105 NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA 164 N+ + L + G GLNL + WW+ Q ++R + G R Sbjct: 969 NDPQCTLFLISLKAGGLGLNLT-AAEYVFLLDPWWNPAVEAQAVDR-----AHRIGQTRP 1022 Query: 165 VFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 VF Y LIA++T++E VL+ +TK + D +L Sbjct: 1023 VFAYRLIARDTVEEKVLELQKTKRELADAIL 1053 >gi|312134029|ref|YP_004001368.1| superfamily ii DNA/RNA helicase [Bifidobacterium longum subsp. longum BBMN68] gi|311773336|gb|ADQ02824.1| Superfamily II DNA/RNA helicase [Bifidobacterium longum subsp. longum BBMN68] Length = 1286 Score = 145 bits (366), Expect = 3e-33, Method: Composition-based stats. Identities = 42/215 (19%), Positives = 79/215 (36%), Gaps = 30/215 (13%) Query: 2 KQYHKFQRELYCDLQGENIEAFNS-----ASKTVKCLQLANGA--VYYDEEKHWKEVHDE 54 K Y ++ L L+ FN+ ++ K Q+ +Y D + Sbjct: 1049 KLYAAHEQRLRMQLEHSEEADFNTSKIRILAELTKLRQICCDPRLLYADAKDQ-----SA 1103 Query: 55 KIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFP----------QGRTLDKDPCTIQ 102 K+ A+ ++E ++ F S L + + F K + Sbjct: 1104 KLAAITELVETCVNEGKKALIFSQFTSFLDLIAERFDAQGLRYYTITGSTPKKKRLELVD 1163 Query: 103 EWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFK 162 ++N P + GLNL G ++++ WW+ Q +R + G Sbjct: 1164 QFNADDTPAFLISLKAGNTGLNLT-GASVVIHADPWWNAAAQDQATDR-----AHRIGQT 1217 Query: 163 RAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 V VY ++A++TI+E +L+ TKS + +A Sbjct: 1218 EDVNVYQVVAKDTIEERILELQHTKSELARQFTDA 1252 >gi|29826907|ref|NP_821541.1| SNF2/RAD54 family helicase [Streptomyces avermitilis MA-4680] gi|29604004|dbj|BAC68076.1| putative SNF2/RAD54 family helicase [Streptomyces avermitilis MA-4680] Length = 950 Score = 145 bits (366), Expect = 3e-33, Method: Composition-based stats. Identities = 38/217 (17%), Positives = 78/217 (35%), Gaps = 25/217 (11%) Query: 3 QYHKFQRELYCDLQGENIEAFNSASK--TVKCLQLANGAVYYDEEKHWKEVH-----DEK 55 Y RE + A Q+ N Y +E ++ K Sbjct: 720 LYEAVVRETMAKIAEAEGIARRGLVLKLLTALKQICNHPAQYLKEHSLRQSTPLNGRSGK 779 Query: 56 IKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQ----------GRTLDKDPCTIQE 103 + L+ +++ A ++V + L+K + G + + Sbjct: 780 LDLLDELVDTITAEGESVLVFTQYKQMATLLEKHLAERGVPTLFLHGGTPVTAREEMVDR 839 Query: 104 WNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKR 163 + G++P+ + G GLNL + +V + WW+ Q +R + G + Sbjct: 840 FQRGEVPVFLLSLKAAGTGLNLTRATH-VVHYDRWWNPAVEDQATDR-----AYRIGQDK 893 Query: 164 AVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKK 200 V V+ LIA+ T+++ V + L K + D ++ + + Sbjct: 894 PVQVHKLIAEGTVEDKVAKLLEAKRALADAVVGSGEA 930 >gi|261854732|ref|YP_003262015.1| SNF2-related protein [Halothiobacillus neapolitanus c2] gi|261835201|gb|ACX94968.1| SNF2-related protein [Halothiobacillus neapolitanus c2] Length = 1086 Score = 145 bits (366), Expect = 3e-33, Method: Composition-based stats. Identities = 35/183 (19%), Positives = 70/183 (38%), Gaps = 20/183 (10%) Query: 29 TVKCLQLANGAVYYDEEKHWKE----VHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLA 82 +K Q+ K + K+ L ++ + I+V F S LA Sbjct: 887 LLKLRQVCCDPRLLPSSKTGQSAKRPTQSAKLDLLLTMLPELVDEGRRILVFSQFTSMLA 946 Query: 83 RLQKAFPQGR--------TLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVF 134 + +A + + ++++ G P+ + G GLNL + ++ Sbjct: 947 LISEALTKAKLAHSMLTGETRDRETVVRQFQNGDTPVFLISLKAGGVGLNLT-AADTVIH 1005 Query: 135 FSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 + WW+ Q +R + G R VFVY L+ + +I+E +L K+ + + + Sbjct: 1006 YDPWWNPAAEDQATDR-----AHRIGQTRQVFVYKLVTEGSIEEKILALQDKKAKLAEGV 1060 Query: 195 LNA 197 L+ Sbjct: 1061 LSG 1063 >gi|257791730|ref|YP_003182336.1| Non-specific serine/threonine protein kinase [Eggerthella lenta DSM 2243] gi|317487799|ref|ZP_07946392.1| SNF2 family domain-containing protein [Eggerthella sp. 1_3_56FAA] gi|325831768|ref|ZP_08164957.1| SNF2 family N-terminal domain protein [Eggerthella sp. HGA1] gi|257475627|gb|ACV55947.1| Non-specific serine/threonine protein kinase [Eggerthella lenta DSM 2243] gi|316913074|gb|EFV34590.1| SNF2 family domain-containing protein [Eggerthella sp. 1_3_56FAA] gi|325486437|gb|EGC88887.1| SNF2 family N-terminal domain protein [Eggerthella sp. HGA1] Length = 1089 Score = 145 bits (366), Expect = 4e-33, Method: Composition-based stats. Identities = 38/189 (20%), Positives = 73/189 (38%), Gaps = 25/189 (13%) Query: 23 FNSASKTVKCLQLANGA--VYYDEEKHWKEVHDEKIKALEVIIEKA--NAAPIIVAYHFN 78 ++ K QL +Y + H K+ A+ I+E A +V F Sbjct: 893 VEVLAELTKLRQLCCDPRLLYENYAGHA-----AKLDAIAEIVESAMDAGEKTLVFSQFT 947 Query: 79 SDLARLQKAFP----------QGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYG 128 S L+ + + + + +N+ P+ + G GLNL G Sbjct: 948 SFLSLIAEVLDAHGVPYFTITGTTPKKRRLDLVNAFNDDDTPVFLVSLKAGGTGLNLT-G 1006 Query: 129 GNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKS 188 +++V WW+ Q +R + G + V V+ +IA++T++E +L K+ Sbjct: 1007 ASVVVHADPWWNAAAQNQATDR-----AHRIGQTQVVSVHKVIAKDTVEERILHLQDAKT 1061 Query: 189 TIQDLLLNA 197 + D ++ A Sbjct: 1062 DLADQVIGA 1070 >gi|182434140|ref|YP_001821859.1| SNF2/RAD54 family helicase [Streptomyces griseus subsp. griseus NBRC 13350] gi|178462656|dbj|BAG17176.1| putative SNF2/RAD54 family helicase [Streptomyces griseus subsp. griseus NBRC 13350] Length = 1006 Score = 145 bits (366), Expect = 4e-33, Method: Composition-based stats. Identities = 41/213 (19%), Positives = 79/213 (37%), Gaps = 21/213 (9%) Query: 3 QYHKFQRELYCDLQGENIEAFNSAS--KTVKCLQLANG-AVYYDEEKHWKEVHDEKIKAL 59 Y RE ++ + Q+ N A Y EE K++ L Sbjct: 779 LYEAVVRETLAEISAADGFERRGLVMKLLTALKQICNHPAQYLKEEDPRIADRSGKVELL 838 Query: 60 EVIIEK--ANAAPIIVAYHFNSDLARLQKAFP----------QGRTLDKDPCTIQEWNEG 107 + +++ A ++V + L++ G + + + + G Sbjct: 839 DELLDTILAEQGSVLVFTQYVQMARLLEEHLAARGVATQFLHGGTPVARREEMVNRFQSG 898 Query: 108 KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFV 167 + P+ + G GLNL G+ +V F WW+ Q +R + G + V V Sbjct: 899 EAPVFLLSLKAAGTGLNLTRAGH-VVHFDRWWNPAVEAQATDR-----AYRIGQTQPVQV 952 Query: 168 YYLIAQNTIDELVLQRLRTKSTIQDLLLNALKK 200 + LIA+ TI++ + + L K + D +L + + Sbjct: 953 HRLIAEGTIEDRIAEMLTRKQGLADAVLGSGEA 985 >gi|160935631|ref|ZP_02083006.1| hypothetical protein CLOBOL_00521 [Clostridium bolteae ATCC BAA-613] gi|158441375|gb|EDP19085.1| hypothetical protein CLOBOL_00521 [Clostridium bolteae ATCC BAA-613] Length = 1075 Score = 145 bits (365), Expect = 4e-33, Method: Composition-based stats. Identities = 35/183 (19%), Positives = 78/183 (42%), Gaps = 23/183 (12%) Query: 26 ASKTVKCLQLANGA-VYYDEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLA 82 ++ ++ Q+ + YD + K++ ++ + A I++ F S L Sbjct: 881 LAELMRLRQICCDPRLCYDNYR----GSSAKLETCMDLVRRGVAGGHKILLFSQFTSMLD 936 Query: 83 RLQKAFPQ----------GRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNIL 132 + F + + ++ + ++ + ++P+ + G GLNL +I+ Sbjct: 937 IIHTRFEKEGIMSHMLTGATSKEERIRLVGDFGKDEVPVFLISLKAGGTGLNLT-AADIV 995 Query: 133 VFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQD 192 + + WW++ Q +R + G + V VY LI +NTI+E +L+ KS + D Sbjct: 996 IHYDPWWNVAAQNQATDR-----THRIGQDKQVTVYKLITRNTIEENILKLQEAKSHLAD 1050 Query: 193 LLL 195 ++ Sbjct: 1051 AVV 1053 >gi|295699426|ref|YP_003607319.1| SNF2-related protein [Burkholderia sp. CCGE1002] gi|295438639|gb|ADG17808.1| SNF2-related protein [Burkholderia sp. CCGE1002] Length = 1172 Score = 145 bits (365), Expect = 5e-33, Method: Composition-based stats. Identities = 37/178 (20%), Positives = 75/178 (42%), Gaps = 21/178 (11%) Query: 31 KCLQLANGAV-YYDEEKHWKEVHDEKIK----ALEVIIEKANAAPIIVAYHFNSDLARLQ 85 + ++ A+G + + K+ L +IE+ +++ F LA + Sbjct: 974 RLVRTASGFTDGAATGGGERAMRSAKLDLLLSMLPELIEE--GRRVLLFSQFTGMLALIA 1031 Query: 86 KAFPQGRT----LDKDPCT----IQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSL 137 +A + L D ++ + +G++PL + G GLNL + ++ + Sbjct: 1032 QALDEAAIPYAMLTGDTTDRVTPVERFQQGEVPLFLISLKAGGVGLNLT-AADTVIHYDP 1090 Query: 138 WWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 WW+ Q +R + G + VFVY LIA +I+E +++ K+ + D +L Sbjct: 1091 WWNPAAENQATDR-----AHRLGQDKPVFVYKLIAAGSIEEKIVELQEHKAGLADSIL 1143 >gi|170693768|ref|ZP_02884925.1| Non-specific serine/threonine protein kinase [Burkholderia graminis C4D1M] gi|170141186|gb|EDT09357.1| Non-specific serine/threonine protein kinase [Burkholderia graminis C4D1M] Length = 1162 Score = 145 bits (365), Expect = 5e-33, Method: Composition-based stats. Identities = 41/198 (20%), Positives = 80/198 (40%), Gaps = 18/198 (9%) Query: 9 RELYCDLQGENI--EAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKA 66 R++ CD + A N + A E+ D + L +I++ Sbjct: 945 RQVCCDPRLVRTLRTAQNVGEVSEGSSTQTARASDKTEKGVRSAKLDLLLSMLPELIDE- 1003 Query: 67 NAAPIIVAYHFNSDLARLQKAFPQG----RTLDKDPCT----IQEWNEGKIPLLFAHPAS 118 +++ F L+ + +A + L D +Q + +G++PL + Sbjct: 1004 -GRRVLLFSQFTGMLSLIAQALDEAAIPYVILTGDTTDRVTPVQRFQQGEVPLFLISLKA 1062 Query: 119 CGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDE 178 G GLNL + ++ + WW+ Q +R + G + VFVY LIA +I+E Sbjct: 1063 GGVGLNLT-AADTVIHYDPWWNPAAENQATDR-----AHRLGQDKPVFVYKLIAAGSIEE 1116 Query: 179 LVLQRLRTKSTIQDLLLN 196 +++ K+ + D +L+ Sbjct: 1117 KIVELQEQKAGLADSILS 1134 >gi|196233486|ref|ZP_03132329.1| Non-specific serine/threonine protein kinase [Chthoniobacter flavus Ellin428] gi|196222482|gb|EDY17009.1| Non-specific serine/threonine protein kinase [Chthoniobacter flavus Ellin428] Length = 815 Score = 145 bits (365), Expect = 5e-33, Method: Composition-based stats. Identities = 35/183 (19%), Positives = 71/183 (38%), Gaps = 18/183 (9%) Query: 26 ASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDL-- 81 + ++ Q ++ E KI+ L ++ +A +++ F S L Sbjct: 622 LTALLRLRQACCDLRLLGQDDIESEQASAKIELLRELLAEAVDGGHRVLIFSQFVSMLTL 681 Query: 82 -------ARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVF 134 + + G T D+ + + G+ P + G GLNL + ++ Sbjct: 682 LREALTEDEIPYCYLDGSTKDRAAE-VDRFQAGETPAFLISLKAGGVGLNLT-AADTVIH 739 Query: 135 FSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 F WW+ Q +R + G ++ V Y LIA++T++E +L + K + D Sbjct: 740 FDPWWNPAVEAQATDR-----AHRIGQQKVVTAYKLIARDTVEEKILALQQKKRALVDAT 794 Query: 195 LNA 197 + + Sbjct: 795 IES 797 >gi|46190976|ref|ZP_00120784.2| COG0553: Superfamily II DNA/RNA helicases, SNF2 family [Bifidobacterium longum DJO10A] Length = 1062 Score = 144 bits (364), Expect = 5e-33, Method: Composition-based stats. Identities = 42/215 (19%), Positives = 79/215 (36%), Gaps = 30/215 (13%) Query: 2 KQYHKFQRELYCDLQGENIEAFNS-----ASKTVKCLQLANGA--VYYDEEKHWKEVHDE 54 K Y ++ L L+ FN+ ++ K Q+ +Y D + Sbjct: 825 KLYAAHEQRLRMQLEHSEEADFNTSKIRILAELTKLRQICCDPRLLYADAKDQ-----SA 879 Query: 55 KIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFP----------QGRTLDKDPCTIQ 102 K+ A+ ++E ++ F S L + + F K + Sbjct: 880 KLAAITELVETCVNEGKKALIFSQFTSFLDLIAERFDAQGLRYYTITGSTPKKKRLELVD 939 Query: 103 EWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFK 162 ++N P + GLNL G ++++ WW+ Q +R + G Sbjct: 940 QFNADDTPAFLISLKAGNTGLNLT-GASVVIHADPWWNAAAQDQATDR-----AHRIGQT 993 Query: 163 RAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 V VY ++A++TI+E +L+ TKS + +A Sbjct: 994 EDVNVYQVVAKDTIEERILELQHTKSELARQFTDA 1028 >gi|255524582|ref|ZP_05391536.1| Non-specific serine/threonine protein kinase [Clostridium carboxidivorans P7] gi|296185768|ref|ZP_06854175.1| SNF2 family [Clostridium carboxidivorans P7] gi|255511735|gb|EET88021.1| Non-specific serine/threonine protein kinase [Clostridium carboxidivorans P7] gi|296049596|gb|EFG89023.1| SNF2 family [Clostridium carboxidivorans P7] Length = 929 Score = 144 bits (364), Expect = 6e-33, Method: Composition-based stats. Identities = 44/206 (21%), Positives = 88/206 (42%), Gaps = 23/206 (11%) Query: 5 HKFQRELYCDLQGENIEAFNS--ASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVI 62 + + E+ +++ + I S + Q+ + E E + K++AL+ I Sbjct: 711 QQAKEEVNNEIRDKGINKSKIKILSIITRLRQICCDPSTFIEN---YEGDNGKMEALKDI 767 Query: 63 IEKA--NAAPIIVAYHFNSDL---------ARLQKAFPQGRTLDKDP-CTIQEWNEGKIP 110 ++ + I++ F S L ++ + G +D ++E+NEG+IP Sbjct: 768 VQNNVNDGHKILLFSQFTSVLKNIGEMFKSENIKYMYLDGSVKAEDRGEIVREFNEGEIP 827 Query: 111 LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYL 170 + + G GLNL +I++ + WW+ Q +R + G K+ V V L Sbjct: 828 IFLISLKAGGTGLNLT-SADIVIHYDPWWNPAVENQASDR-----AHRIGQKKTVEVIRL 881 Query: 171 IAQNTIDELVLQRLRTKSTIQDLLLN 196 IA+ TI+E + + K I + ++ Sbjct: 882 IAKGTIEEKIHKIQEKKKEIINDVIE 907 >gi|298528668|ref|ZP_07016072.1| SNF2-related protein [Desulfonatronospira thiodismutans ASO3-1] gi|298512320|gb|EFI36222.1| SNF2-related protein [Desulfonatronospira thiodismutans ASO3-1] Length = 1387 Score = 144 bits (364), Expect = 6e-33, Method: Composition-based stats. Identities = 46/212 (21%), Positives = 78/212 (36%), Gaps = 25/212 (11%) Query: 2 KQYHKFQRELYCDLQGENIEA----FNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIK 57 Y + + +L+ + + ++ + Q E K+ Sbjct: 1164 AMYEAMRMQALENLEQVSEQGGARNLRILTELTRLRQFCCHPRMVVPESRV---PGSKLD 1220 Query: 58 ALEVIIEK--ANAAPIIVAYHFNSDL----ARLQKAFPQGRTLDK------DPCTIQEWN 105 L+ II + AN +V F L RL+ + R LD IQ + Sbjct: 1221 LLQEIITELLANKHKALVFSQFVKHLALVRERLEAMGIEYRYLDGSTPGHVREQEIQAFQ 1280 Query: 106 EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 EG+ L + G GLNL + ++ WW+ Q +R + G + V Sbjct: 1281 EGRGDLFLISLKAGGLGLNLT-AADYVIHLDPWWNPAVEDQATDR-----SHRIGQENPV 1334 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 VY L+A+NTI+E +++ K + D LL Sbjct: 1335 TVYRLVAENTIEEKIVRLHAEKRDLADSLLEG 1366 >gi|289450552|ref|YP_003475678.1| SNF2 family N-terminal domain-containing protein [Clostridiales genomosp. BVAB3 str. UPII9-5] gi|289185099|gb|ADC91524.1| SNF2 family N-terminal domain protein [Clostridiales genomosp. BVAB3 str. UPII9-5] Length = 1107 Score = 144 bits (364), Expect = 6e-33, Method: Composition-based stats. Identities = 42/182 (23%), Positives = 74/182 (40%), Gaps = 21/182 (11%) Query: 26 ASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLAR 83 S + Q+A + E H K++ LE I+ A I++ F + LA Sbjct: 914 LSLLTRLRQIACHPALFLENYH---GSSGKLELLEEILTTALAGGHRILIFSQFTALLAI 970 Query: 84 LQ---------KAFPQGRTLDKDPCT-IQEWNEGKIPLLFAHPASCGHGLNLQYGGNILV 133 ++ + G K+ + ++N G+ + + G GLNL G + ++ Sbjct: 971 IKPLLERLAITYMYIDGGVSPKERTDLVNKFNAGEGEVFLISLKAGGTGLNLT-GADTVI 1029 Query: 134 FFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDL 193 WW+ QQ +R + G +R V VY LIA+ TI+E + K + D Sbjct: 1030 LMDPWWNPAVEQQATDR-----SHRLGQQRRVQVYRLIAKGTIEEKIRNLQERKQNLIDQ 1084 Query: 194 LL 195 ++ Sbjct: 1085 VV 1086 >gi|317131242|ref|YP_004090556.1| SNF2-related protein [Ethanoligenens harbinense YUAN-3] gi|315469221|gb|ADU25825.1| SNF2-related protein [Ethanoligenens harbinense YUAN-3] Length = 1081 Score = 144 bits (364), Expect = 6e-33, Method: Composition-based stats. Identities = 36/184 (19%), Positives = 76/184 (41%), Gaps = 23/184 (12%) Query: 26 ASKTVKCLQLANGA-VYYDEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLA 82 + + QL +YY++ K++ ++ + +++ F S L+ Sbjct: 881 LAMLTRLRQLCCDPSLYYED----YTGGSAKLELCMELLRSVTESGHKVLLFSQFTSMLS 936 Query: 83 RLQKAF---------PQGRT-LDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNIL 132 + +G T ++ +N P+ + G GLNL +I+ Sbjct: 937 IIADRLTGDGIGYYVLKGSTSKEERARLTTRFNNDDTPVFLISLKAGGTGLNLT-AADIV 995 Query: 133 VFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQD 192 + + WW++ Q +R + G K +V VY LIA++TI+E +L+ + K + D Sbjct: 996 IHYDPWWNVSAQNQATDR-----AHRIGQKSSVQVYKLIAKDTIEEKILKLQQDKLKLAD 1050 Query: 193 LLLN 196 +++ Sbjct: 1051 SVIS 1054 >gi|323530052|ref|YP_004232204.1| SNF2-like protein [Burkholderia sp. CCGE1001] gi|323387054|gb|ADX59144.1| SNF2-related protein [Burkholderia sp. CCGE1001] Length = 1175 Score = 144 bits (364), Expect = 6e-33, Method: Composition-based stats. Identities = 37/165 (22%), Positives = 70/165 (42%), Gaps = 20/165 (12%) Query: 44 EEKHWKEVHDEKIK----ALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQG----RTLD 95 E+ + K+ L +IE+ +++ F LA + +A + L Sbjct: 991 AERGARTTRSAKLDLLLSMLPELIEE--GRRVLLFSQFTGMLALIAEALDEAAIPYVILT 1048 Query: 96 KDPCT----IQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERI 151 D ++ + GK+PL + G GLNL + ++ + WW+ Q +R Sbjct: 1049 GDTADRITPVERFQHGKVPLFLISLKAGGVGLNLT-AADTVIHYDPWWNPAAENQATDR- 1106 Query: 152 GVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + G + VFVY LIA +I+E +++ K+ + D +L+ Sbjct: 1107 ----AHRLGQDKPVFVYKLIAAGSIEEKIVELQEQKAGLADSILS 1147 >gi|288958707|ref|YP_003449048.1| hypothetical protein AZL_018660 [Azospirillum sp. B510] gi|288911015|dbj|BAI72504.1| hypothetical protein AZL_018660 [Azospirillum sp. B510] Length = 1160 Score = 144 bits (364), Expect = 7e-33, Method: Composition-based stats. Identities = 37/184 (20%), Positives = 72/184 (39%), Gaps = 24/184 (13%) Query: 29 TVKCLQLANGA----VYYDEEKHWKEVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLA 82 +K Q+ + K+ AL ++++ I++ F + L Sbjct: 964 LLKLRQVCCDPRLLKSIAALGGKAR--PSAKLHALTGMVKEMVPEGRRILIFSQFTTMLD 1021 Query: 83 RLQKAFPQ---------GRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILV 133 ++ + GRTLD+ + + ++P+ + G GLNL + ++ Sbjct: 1022 LIKLELEKAAIPYVELTGRTLDR-ALPVNRFQNREVPVFLISLKAGGRGLNLT-AADTVI 1079 Query: 134 FFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDL 193 + WW+ Q +R + G + VFVY LIA NT++E +L R K ++ Sbjct: 1080 HYDPWWNPAAEDQATDR-----AYRIGQDKPVFVYKLIAANTVEERILDLQRRKGSLSAA 1134 Query: 194 LLNA 197 + Sbjct: 1135 TIEG 1138 >gi|170720849|ref|YP_001748537.1| non-specific serine/threonine protein kinase [Pseudomonas putida W619] gi|169758852|gb|ACA72168.1| Non-specific serine/threonine protein kinase [Pseudomonas putida W619] Length = 1108 Score = 144 bits (364), Expect = 7e-33, Method: Composition-based stats. Identities = 35/183 (19%), Positives = 75/183 (40%), Gaps = 17/183 (9%) Query: 29 TVKCLQLANGA-VYYDEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQ 85 +K Q+ + E + K+ AL ++E+ + +++ F S LA ++ Sbjct: 909 LLKLRQVCCDLRLVKGVEIKGNQADKGKLGALLDMLEELLSEGRRVLLFSQFTSMLALIE 968 Query: 86 KAFPQGRTL--------DKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSL 137 + + + +Q++ +G + + G GLNL + ++ F Sbjct: 969 QELEKRKIRYSLLTGDTRDRRTPVQQFQQGDSEVFLISLKAGGVGLNLT-AADTVIHFDP 1027 Query: 138 WWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 WW+ Q +R + G + VFV+ LI + T++E + Q + K+ + LL+ Sbjct: 1028 WWNPASENQATDR-----AYRIGQDKPVFVFKLITRGTVEEKIQQLQQEKAALAASLLDG 1082 Query: 198 LKK 200 + Sbjct: 1083 AEA 1085 >gi|91778444|ref|YP_553652.1| putative helicase [Burkholderia xenovorans LB400] gi|91691104|gb|ABE34302.1| Putative helicase [Burkholderia xenovorans LB400] Length = 1150 Score = 144 bits (363), Expect = 7e-33, Method: Composition-based stats. Identities = 36/164 (21%), Positives = 72/164 (43%), Gaps = 20/164 (12%) Query: 45 EKHWKEVHDEKIK----ALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQG----RTLDK 96 EK + + K+ L +IE+ +++ F L+ + +A + L Sbjct: 967 EKGARAMRSAKLDLLLSMLPELIEE--GRRVLLFSQFTGMLSLIAEALEEAAIPYVILTG 1024 Query: 97 DPCT----IQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIG 152 D ++ + +G++PL + G GLNL + ++ + WW+ Q +R Sbjct: 1025 DTADRVTPVERFQQGEVPLFLISLKAGGVGLNLT-AADTVIHYDPWWNPAAENQATDR-- 1081 Query: 153 VTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + G + VFVY LIA +I+E +++ K+ + D +L+ Sbjct: 1082 ---AHRLGQDKPVFVYKLIAAGSIEEKIVELQEQKAGLADSILS 1122 >gi|227545238|ref|ZP_03975287.1| SNF2 helicase associated domain protein [Lactobacillus reuteri CF48-3A] gi|300909872|ref|ZP_07127333.1| non-specific serine/threonine protein kinase [Lactobacillus reuteri SD2112] gi|227184771|gb|EEI64842.1| SNF2 helicase associated domain protein [Lactobacillus reuteri CF48-3A] gi|300893737|gb|EFK87096.1| non-specific serine/threonine protein kinase [Lactobacillus reuteri SD2112] Length = 1161 Score = 144 bits (363), Expect = 7e-33, Method: Composition-based stats. Identities = 49/213 (23%), Positives = 88/213 (41%), Gaps = 27/213 (12%) Query: 3 QYHKFQRELYCDLQGENIE-----AFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIK 57 Y + L +Q +N E ++ + +L D KIK Sbjct: 940 LYQARAQRLIRQIQKQNDEEFQQNKLAVLAEITRLRELCCSPQLLDSG---YSGPSGKIK 996 Query: 58 ALEVII--EKANAAPIIVAYHFNSDLARLQKAFPQ---------GRTLDKDP-CTIQEWN 105 A +I E A+ I++ F S LA L++ + G+T D + E+N Sbjct: 997 ATMNLIKDEVADNHKILLFSQFTSALAILKEKLAKAGIKYFVIEGKTKKADRLQFVDEFN 1056 Query: 106 EGKIP-LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA 164 P + + G GLNL ++++ F WW++ Q +R + G K Sbjct: 1057 SYDQPAVFLISLKAGGTGLNLT-SADVVIHFDPWWNIAAENQATDR-----AHRIGQKNN 1110 Query: 165 VFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 V +Y +IAQNTI+E +++ + K+ + + +L+ Sbjct: 1111 VTIYKMIAQNTIEEKIIEMQQKKAALANSILSG 1143 >gi|296159842|ref|ZP_06842663.1| SNF2-related protein [Burkholderia sp. Ch1-1] gi|295889825|gb|EFG69622.1| SNF2-related protein [Burkholderia sp. Ch1-1] Length = 1150 Score = 144 bits (363), Expect = 7e-33, Method: Composition-based stats. Identities = 36/164 (21%), Positives = 72/164 (43%), Gaps = 20/164 (12%) Query: 45 EKHWKEVHDEKIK----ALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQG----RTLDK 96 EK + + K+ L +IE+ +++ F L+ + +A + L Sbjct: 967 EKGARAMRSAKLDLLLSMLPELIEE--GRRVLLFSQFTGMLSLIAEALEEAAIPYVILTG 1024 Query: 97 DPCT----IQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIG 152 D ++ + +G++PL + G GLNL + ++ + WW+ Q +R Sbjct: 1025 DTADRVTPVERFQQGEVPLFLISLKAGGVGLNLT-AADTVIHYDPWWNPAAENQATDR-- 1081 Query: 153 VTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + G + VFVY LIA +I+E +++ K+ + D +L+ Sbjct: 1082 ---AHRLGQDKPVFVYKLIAAGSIEEKIVELQEQKAGLADSILS 1122 >gi|330819988|ref|YP_004348850.1| SNF2-related protein [Burkholderia gladioli BSR3] gi|327371983|gb|AEA63338.1| SNF2-related protein [Burkholderia gladioli BSR3] Length = 1119 Score = 144 bits (363), Expect = 8e-33, Method: Composition-based stats. Identities = 37/181 (20%), Positives = 73/181 (40%), Gaps = 22/181 (12%) Query: 29 TVKCLQLANGAVYYDEEKHWKEVHDEKI----KALEVIIEKANAAPIIVAYHFNSDLARL 84 +K Q+ E+ + K+ + L +IE+ +++ F L + Sbjct: 907 LLKLRQVCCDPRLVKLERAARVEESAKLALLMEMLPELIEE--GRRVLLFSQFTGMLELI 964 Query: 85 QKA---------FPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFF 135 +A G T D+ +Q + +G++PL + G GLNL + ++ + Sbjct: 965 AEALDAAGIAHVMLTGDTTDRV-TPVQRFQQGEVPLFLISLKAGGVGLNLT-AADTVIHY 1022 Query: 136 SLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 WW+ Q +R + G + VFVY LI +++E +L K+ + +L Sbjct: 1023 DPWWNPSVENQATDR-----AHRLGQDKPVFVYKLIVAGSVEEKILVLQEQKAALASAIL 1077 Query: 196 N 196 + Sbjct: 1078 S 1078 >gi|239940441|ref|ZP_04692378.1| SNF2/RAD54 family helicase [Streptomyces roseosporus NRRL 15998] gi|291443871|ref|ZP_06583261.1| SNF2/RAD54 family helicase [Streptomyces roseosporus NRRL 15998] gi|291346818|gb|EFE73722.1| SNF2/RAD54 family helicase [Streptomyces roseosporus NRRL 15998] Length = 1006 Score = 144 bits (363), Expect = 8e-33, Method: Composition-based stats. Identities = 40/209 (19%), Positives = 79/209 (37%), Gaps = 23/209 (11%) Query: 3 QYHKFQRELYCDLQGENIEAFNSA--SKTVKCLQLANG-AVYYDEEKHWKEVHDEKIKAL 59 Y RE ++G A Q+ N A Y EE K+ L Sbjct: 780 LYEAAVRETMAQIEGAEGIARRGLIMKLLTSLKQICNHPAQYLKEEPTRLTGRSGKLALL 839 Query: 60 EVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTLD-----------KDPCTIQEWNE 106 + +++ + +++ + S ARL A R + + + + Sbjct: 840 DELLDTILSEDGSVLIFTQYVSM-ARLLSAHLASRAIPSQLLHGGTPVPERERMVDRFQS 898 Query: 107 GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVF 166 ++P+ + G GLNL + +V F WW+ +Q +R + G + V Sbjct: 899 AEVPVFLLSLKAAGTGLNLTRAAH-VVHFDRWWNPAVEEQATDR-----AYRIGQTQPVQ 952 Query: 167 VYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 V+ +I + T+++ + + L +K + D +L Sbjct: 953 VHRIITEGTVEDRIAELLESKRALADAVL 981 >gi|255282163|ref|ZP_05346718.1| domain protein, SNF2 family [Bryantella formatexigens DSM 14469] gi|255267111|gb|EET60316.1| domain protein, SNF2 family [Bryantella formatexigens DSM 14469] Length = 454 Score = 144 bits (363), Expect = 8e-33, Method: Composition-based stats. Identities = 39/210 (18%), Positives = 88/210 (41%), Gaps = 21/210 (10%) Query: 2 KQYHKFQRELYCDLQ-GENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 + Y++ +R+ + +L+ G I A +K ++ Q G + DE + V KI ALE Sbjct: 245 QLYNQIKRDSFAELEDGGQITAPTVLTKLLRLQQFTGGFIQADEGIKPEFVFKGKINALE 304 Query: 61 VIIEK---ANAAPIIVAYHFNSDLARLQKAFPQGRTL-----------DKDPCTIQEWNE 106 I++ + +++ F ++ + + + + D+ P Sbjct: 305 DILDDYVISAGKKLVIFCRFRPEIDLISDSLKKKKIRFASIYGDIKIEDRGPIVEDFQKN 364 Query: 107 GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVF 166 + + A + G G+ L + V++S ++ + Q + RI + G K Sbjct: 365 PETKVFLAQIDTAGLGITLT-AADTCVYYSENFNYAAYSQSLARI-----HRIGQKNRCT 418 Query: 167 VYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 +L+ +++IDE +L+ L K + +++ Sbjct: 419 YIHLVVEHSIDETILKALARKEDLAKTVVD 448 >gi|209521910|ref|ZP_03270580.1| Non-specific serine/threonine protein kinase [Burkholderia sp. H160] gi|209497652|gb|EDZ97837.1| Non-specific serine/threonine protein kinase [Burkholderia sp. H160] Length = 1162 Score = 144 bits (363), Expect = 8e-33, Method: Composition-based stats. Identities = 36/151 (23%), Positives = 67/151 (44%), Gaps = 16/151 (10%) Query: 53 DEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRT----LDKDPCT----IQEW 104 D + L +IE+ +++ F LA + KA + L D ++ + Sbjct: 991 DLLLSMLPELIEE--GRRVLLFSQFTGMLALIAKALDEAAIPYAMLTGDTTDRVTPVERF 1048 Query: 105 NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA 164 +G++PL + G GLNL + ++ + WW+ Q +R + G + Sbjct: 1049 QQGEVPLFLISLKAGGVGLNLT-AADTVIHYDPWWNPAAENQATDR-----AHRLGQDKP 1102 Query: 165 VFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 VFVY LIA +I+E +++ K+ + D +L Sbjct: 1103 VFVYKLIAAGSIEEKIVELQEHKAGLADSIL 1133 >gi|266625310|ref|ZP_06118245.1| helicase, SNF2/RAD54 family [Clostridium hathewayi DSM 13479] gi|288862792|gb|EFC95090.1| helicase, SNF2/RAD54 family [Clostridium hathewayi DSM 13479] Length = 889 Score = 144 bits (363), Expect = 9e-33, Method: Composition-based stats. Identities = 31/204 (15%), Positives = 79/204 (38%), Gaps = 26/204 (12%) Query: 6 KFQRELYCDLQGENIEAFNSASKTVKCLQLAN--GAVYYDEEKHWKEVHDEKIKALEVII 63 + +++L G + + ++ + Q+ Y + K++ +I Sbjct: 678 QVKQQLELAGDGGS-DRIQILAQLTRLRQICCDPHLCYSNYNG-----SSAKLETCIDLI 731 Query: 64 EKA--NAAPIIVAYHFNSDLARLQKAFPQ----------GRTLDKDPCTIQEWNEGKIPL 111 I++ F S L ++K + ++ + + + +P+ Sbjct: 732 RNGVEGGHKILLFSQFTSMLEIIEKRLKKEGMAYYILTGATPKEERLHMVSSFKDDGVPV 791 Query: 112 LFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLI 171 + G GLNL ++++ + WW++ Q +R + G ++ V V+ LI Sbjct: 792 FLISLKAGGTGLNLT-AADVVIHYDPWWNVAAQNQATDR-----THRIGQEKQVTVFKLI 845 Query: 172 AQNTIDELVLQRLRTKSTIQDLLL 195 + TI+E +L+ +K + + ++ Sbjct: 846 TKGTIEENILKLQESKKNLAEQII 869 >gi|91793580|ref|YP_563231.1| SNF2-related [Shewanella denitrificans OS217] gi|91715582|gb|ABE55508.1| SNF2-related [Shewanella denitrificans OS217] Length = 1088 Score = 143 bits (362), Expect = 9e-33, Method: Composition-based stats. Identities = 45/205 (21%), Positives = 83/205 (40%), Gaps = 23/205 (11%) Query: 5 HKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKI----KALE 60 K REL+ +G + +K Q E+ + K+ + L Sbjct: 875 EKKLRELFAQ-KGVSSSHIEFLDALLKLRQACCDPRLVKLEQAQNVKSNAKLTWLTENLT 933 Query: 61 VIIEKANAAPIIVAYHFNSDLARLQK---------AFPQGRTLDKDPCTIQEWNEGKIPL 111 ++E+ I++ F L+ +++ + G+T + I ++ EG+ P+ Sbjct: 934 EMVEE--GRKILIFSQFTGMLSLIEEELQRLNIDYSLLTGKTRSRQTQ-IDDFQEGRKPV 990 Query: 112 LFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLI 171 + G GLNL + ++ F WW+ ER R + G VFVY LI Sbjct: 991 FLISLKAGGTGLNLTT-ADTVIHFDPWWN-----PAAERQATDRAHRIGQLNPVFVYKLI 1044 Query: 172 AQNTIDELVLQRLRTKSTIQDLLLN 196 AQ T++E + + + K + D +L+ Sbjct: 1045 AQGTVEEKIHEMQQHKQGLADSILS 1069 >gi|288962950|ref|YP_003453244.1| SNF2 family DNA/RNA helicase [Azospirillum sp. B510] gi|288915216|dbj|BAI76700.1| SNF2 family DNA/RNA helicase [Azospirillum sp. B510] Length = 1172 Score = 143 bits (362), Expect = 9e-33, Method: Composition-based stats. Identities = 35/188 (18%), Positives = 71/188 (37%), Gaps = 22/188 (11%) Query: 24 NSASKTVKCLQLANGAVYYDEE----KHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHF 77 +K Q+ E + K K+ L ++ + A+ I++ F Sbjct: 969 TILDALLKLRQVCCDPRLVKLESARKRVAKGAASAKLDRLLEMLPELLADGRRILLFSQF 1028 Query: 78 NSDLARLQKAFPQ---------GRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYG 128 S ++ + G T D+ + + G++PL + G GLNL Sbjct: 1029 TSMFDLMRPELERLAIPFVELTGDTRDR-ETPVNRFQAGEVPLFLISLKAGGTGLNLT-A 1086 Query: 129 GNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKS 188 + ++ + WW+ Q +R + G + VFVY L+ T++E ++Q K Sbjct: 1087 ADTVIHYDPWWNPAVEDQATDR-----AHRIGQDKPVFVYKLVTTGTVEERMVQLQERKR 1141 Query: 189 TIQDLLLN 196 + + + + Sbjct: 1142 RLGEAVYD 1149 >gi|296122550|ref|YP_003630328.1| SNF2-related protein [Planctomyces limnophilus DSM 3776] gi|296014890|gb|ADG68129.1| SNF2-related protein [Planctomyces limnophilus DSM 3776] Length = 1112 Score = 143 bits (362), Expect = 1e-32, Method: Composition-based stats. Identities = 45/212 (21%), Positives = 78/212 (36%), Gaps = 25/212 (11%) Query: 2 KQYHKFQ---RELYCDL---QGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEK 55 + Y + + R+ L QG + ++ Q + K E K Sbjct: 890 RLYDELRDHFRDSLLGLIESQGLAKTKMHVLEALLRLRQASCHPALL--HKSSDEEGSAK 947 Query: 56 IKALEVIIEKA--NAAPIIVAYHFNSDLARLQKAFP---------QGRTLDKDPCTIQEW 104 + L +E+ +V F S LA ++K G+T D+ C + Sbjct: 948 LDVLIPHLEELVGEGHKTLVFSQFTSMLAIVRKHLDRAGITYEYLDGQTRDRKECVERFQ 1007 Query: 105 NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA 164 N+ + + G GLNL + + WW+ Q I+R + G R Sbjct: 1008 NDKDCGVFLISLKAGGLGLNLT-AADYVFILDPWWNPAVETQAIDR-----AHRVGQTRQ 1061 Query: 165 VFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 VF Y LI +NT++E + + + K + D +L Sbjct: 1062 VFAYRLICKNTVEEKIAELQKQKRELADAILE 1093 >gi|320006862|gb|ADW01712.1| SNF2-related protein [Streptomyces flavogriseus ATCC 33331] Length = 992 Score = 143 bits (362), Expect = 1e-32, Method: Composition-based stats. Identities = 41/213 (19%), Positives = 79/213 (37%), Gaps = 21/213 (9%) Query: 3 QYHKFQRELYCDLQGENIEAFNSA--SKTVKCLQLANG-AVYYDEEKHWKEVHDEKIKAL 59 Y RE ++ G + A Q+ N A Y EE+ K++ L Sbjct: 765 LYEAVVRETLDEISGADGFARRGLIVKLMTALKQICNHPAQYLKEEQPRIADRSGKVELL 824 Query: 60 EVIIEK--ANAAPIIVAYHFNSDLARLQKAFP----------QGRTLDKDPCTIQEWNEG 107 + +++ + A ++V + L++ G + + + + G Sbjct: 825 DELLDTILSEGAGVLVFTQYVQMARLLERHLAARGVPTQFLHGGTPIAEREAMVDRFQAG 884 Query: 108 KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFV 167 ++P+ + G GLNL + +V WW+ Q +R + G R V V Sbjct: 885 RVPVFLLSLKAAGTGLNLTRAEH-VVHVDRWWNPAVEAQATDR-----AYRIGQTRPVQV 938 Query: 168 YYLIAQNTIDELVLQRLRTKSTIQDLLLNALKK 200 + LI + TI++ + L K + D +L + Sbjct: 939 HRLITEGTIEDRIAAMLARKQGLADAVLGGGEA 971 >gi|152986052|ref|YP_001350061.1| helicase [Pseudomonas aeruginosa PA7] gi|150961210|gb|ABR83235.1| probable helicase [Pseudomonas aeruginosa PA7] Length = 773 Score = 143 bits (362), Expect = 1e-32, Method: Composition-based stats. Identities = 40/183 (21%), Positives = 77/183 (42%), Gaps = 22/183 (12%) Query: 29 TVKCLQLANGAV----YYDEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLA 82 +K Q+ D + + K+ L ++++ A +++ F S LA Sbjct: 573 LLKLRQVCCDTRLLQRQEDSARGGRAASSGKLAYLLDMLDELIAEGRRVLLFSQFTSMLA 632 Query: 83 RLQKAFPQ---------GRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILV 133 ++ A Q G T D+ +Q + G++P+ + G GLNL + ++ Sbjct: 633 LVEDALRQRGVDYVLLTGETRDRR-APVQRFQGGQVPVFLISLKAGGVGLNLT-AADTVI 690 Query: 134 FFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDL 193 + WW+ Q +R + G + VFVY LIA+ T++E + + K+ + D Sbjct: 691 HYDPWWNPAVENQASDR-----AYRIGQDKPVFVYRLIARGTVEEKIQHLQQEKAALADG 745 Query: 194 LLN 196 L + Sbjct: 746 LFS 748 >gi|295424920|ref|ZP_06817632.1| possible non-specific serine/threonine protein kinase [Lactobacillus amylolyticus DSM 11664] gi|295065359|gb|EFG56255.1| possible non-specific serine/threonine protein kinase [Lactobacillus amylolyticus DSM 11664] Length = 1090 Score = 143 bits (362), Expect = 1e-32, Method: Composition-based stats. Identities = 41/215 (19%), Positives = 85/215 (39%), Gaps = 31/215 (14%) Query: 3 QYHKFQRELYCDLQGENIE-----AFNSASKTVKCLQLAN--GAVYYDEEKHWKEVHDEK 55 Y ++L L ++ + F + K +L +Y D K Sbjct: 868 LYQAQTQKLIAQLNKQDDKDFKKQRFQVLAAITKLRELCCDPHLLYEDYRGK-----SAK 922 Query: 56 IKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRT----------LDKDPCTIQE 103 + A +IE A+ I++ F S L +++ Q + K I++ Sbjct: 923 LAATMELIEDSIADGHKILLFSQFTSMLELIEQKLKQAKIVTFVITGSTPKQKRQELIKQ 982 Query: 104 WNEGKIP-LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFK 162 +N+ P + + G G+NL ++++ + WW++ Q +R + G K Sbjct: 983 FNKLDHPAIFLISLKAGGTGINLT-SADVVIHYDPWWNVAAENQATDR-----AHRIGQK 1036 Query: 163 RAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 V +Y ++A+ TI+E +++ K + D +L+ Sbjct: 1037 HNVQIYKMVAKGTIEEKIVELQERKEKLADEVLSG 1071 >gi|256003807|ref|ZP_05428794.1| SNF2-related protein [Clostridium thermocellum DSM 2360] gi|255992145|gb|EEU02240.1| SNF2-related protein [Clostridium thermocellum DSM 2360] gi|316939145|gb|ADU73179.1| SNF2 helicase associated domain protein [Clostridium thermocellum DSM 1313] Length = 1087 Score = 143 bits (362), Expect = 1e-32, Method: Composition-based stats. Identities = 50/213 (23%), Positives = 85/213 (39%), Gaps = 27/213 (12%) Query: 2 KQY----HKFQRELYCDLQGENIEAFNS--ASKTVKCLQLANGAVYYDEEKHWKEVHDEK 55 K Y K + E+ +LQ E S + Q+ + E K Sbjct: 864 KIYLAYLKKAKAEVAMELQTNGFEKSQIKILSLLTRLRQICCHPSLFIEN---YSGESGK 920 Query: 56 IKALEVIIEKA--NAAPIIVAYHFNSDLARLQKAFPQ---------GRTLDKDP-CTIQE 103 I+ALE I+ A + I++ F S L +++ Q G T +D ++ Sbjct: 921 IQALEEIMTDAFDSGHRILLFSQFTSMLEIIKQFLDQKSVEYFYLDGSTKAQDRVEMVKA 980 Query: 104 WNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKR 163 +N+G L + G GLNL G ++++ F WW+ Q +R + G K Sbjct: 981 FNQGTGKLFLISLKAGGTGLNLT-GADMVIHFDPWWNPAVEDQASDR-----AHRIGQKN 1034 Query: 164 AVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 V V LI Q TI++ + + + K + D ++ Sbjct: 1035 VVQVMKLITQGTIEDKIFELQQKKKEMIDSVIQ 1067 >gi|307727814|ref|YP_003911027.1| SNF2-related protein [Burkholderia sp. CCGE1003] gi|307588339|gb|ADN61736.1| SNF2-related protein [Burkholderia sp. CCGE1003] Length = 1227 Score = 143 bits (362), Expect = 1e-32, Method: Composition-based stats. Identities = 37/165 (22%), Positives = 71/165 (43%), Gaps = 20/165 (12%) Query: 44 EEKHWKEVHDEKIK----ALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQG----RTLD 95 EK + K+ L +IE+ +++ F L+ + +A + L Sbjct: 1043 PEKGARPTRSAKLDLLLSMLPELIEE--GRRVLLFSQFTGMLSLIAQALDEAAIAYVILT 1100 Query: 96 KDPCT----IQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERI 151 D +Q + +G++PL + G GLNL + ++ + WW+ Q +R Sbjct: 1101 GDTADRITPVQRFQQGEVPLFLISLKAGGVGLNLT-AADTVIHYDPWWNPAAENQATDR- 1158 Query: 152 GVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + G + VFVY LIA +I+E +++ K+ + D +L+ Sbjct: 1159 ----AHRLGQDKPVFVYKLIAAGSIEEKIVELQEQKAGLADSILS 1199 >gi|270208570|ref|YP_003329341.1| putative helicase [Sinorhizobium meliloti] gi|76880844|gb|ABA56014.1| putative helicase [Sinorhizobium meliloti] Length = 1126 Score = 143 bits (362), Expect = 1e-32, Method: Composition-based stats. Identities = 38/183 (20%), Positives = 72/183 (39%), Gaps = 22/183 (12%) Query: 29 TVKCLQLANGA---VYYDEEK-HWKEVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLA 82 +K Q D +K + K+ L ++ + +IV F S L Sbjct: 932 LLKLRQACCDPRLLKLTDTKKPSSVQAESAKLDRLMELVGELADEGRKVIVFSQFTSMLD 991 Query: 83 RLQKAFPQ---------GRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILV 133 +++ G T+D+ ++ + G +P+ + G GLNL + ++ Sbjct: 992 LIRRRLDDADIAYALLTGDTVDRGTQ-VESFQHGTMPVFLISLKAGGVGLNLT-AADTVI 1049 Query: 134 FFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDL 193 + WW+ +Q I+R + G + VFVY L+A +TI+E + K + Sbjct: 1050 LYDPWWNPAVEEQAIDR-----AHRIGQDKPVFVYRLVAADTIEEKMDVLKDKKRALAAS 1104 Query: 194 LLN 196 L + Sbjct: 1105 LFD 1107 >gi|257094640|ref|YP_003168281.1| Non-specific serine/threonine protein kinase [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] gi|257047164|gb|ACV36352.1| Non-specific serine/threonine protein kinase [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] Length = 1003 Score = 143 bits (362), Expect = 1e-32, Method: Composition-based stats. Identities = 36/179 (20%), Positives = 70/179 (39%), Gaps = 18/179 (10%) Query: 29 TVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQK 86 +K Q+ K K+ L ++ + I++ F S LA ++K Sbjct: 809 LLKLRQVCCDPRLVKARSAQKVKERAKLDLLMTMLPEQVEEGRRILLFSQFTSMLALIEK 868 Query: 87 AFP---------QGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSL 137 G T D++ ++ + ++P+ + G GLNL + ++ + Sbjct: 869 ELKLAGIDYVILTGDTRDREAQ-VRRFQACEVPVFLISLKTGGVGLNLT-AADTVIHYDP 926 Query: 138 WWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 WW+ Q +R + G + VFVY LI +I+E +L K+ + +L+ Sbjct: 927 WWNPAAENQATDR-----AHRLGQDKPVFVYKLIVAGSIEEKILALQERKAELAAHILS 980 >gi|125974936|ref|YP_001038846.1| SNF2-related protein [Clostridium thermocellum ATCC 27405] gi|125715161|gb|ABN53653.1| SNF2-related protein [Clostridium thermocellum ATCC 27405] Length = 1087 Score = 143 bits (361), Expect = 1e-32, Method: Composition-based stats. Identities = 50/213 (23%), Positives = 85/213 (39%), Gaps = 27/213 (12%) Query: 2 KQY----HKFQRELYCDLQGENIEAFNS--ASKTVKCLQLANGAVYYDEEKHWKEVHDEK 55 K Y K + E+ +LQ E S + Q+ + E K Sbjct: 864 KIYLAYLKKAKAEVAMELQTNGFEKSQIKILSLLTRLRQICCHPSLFIEN---YSGESGK 920 Query: 56 IKALEVIIEKA--NAAPIIVAYHFNSDLARLQKAFPQ---------GRTLDKDP-CTIQE 103 I+ALE I+ A + I++ F S L +++ Q G T +D ++ Sbjct: 921 IQALEEIMTDAFDSGHRILLFSQFTSMLEIIKQFLDQKSVEYFYLDGSTKAQDRVEMVKA 980 Query: 104 WNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKR 163 +N+G L + G GLNL G ++++ F WW+ Q +R + G K Sbjct: 981 FNQGTGKLFLISLKAGGTGLNLT-GADMVIHFDPWWNPAVEDQASDR-----AHRIGQKN 1034 Query: 164 AVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 V V LI Q TI++ + + + K + D ++ Sbjct: 1035 VVQVMKLITQGTIEDKIFELQQKKKEMIDSVIQ 1067 >gi|281418599|ref|ZP_06249618.1| SNF2-related protein [Clostridium thermocellum JW20] gi|281407683|gb|EFB37942.1| SNF2-related protein [Clostridium thermocellum JW20] Length = 1087 Score = 143 bits (361), Expect = 1e-32, Method: Composition-based stats. Identities = 50/213 (23%), Positives = 85/213 (39%), Gaps = 27/213 (12%) Query: 2 KQY----HKFQRELYCDLQGENIEAFNS--ASKTVKCLQLANGAVYYDEEKHWKEVHDEK 55 K Y K + E+ +LQ E S + Q+ + E K Sbjct: 864 KIYLAYLKKAKAEVAMELQTNGFEKSQIKILSLLTRLRQICCHPSLFIEN---YSGESGK 920 Query: 56 IKALEVIIEKA--NAAPIIVAYHFNSDLARLQKAFPQ---------GRTLDKDP-CTIQE 103 I+ALE I+ A + I++ F S L +++ Q G T +D ++ Sbjct: 921 IQALEEIMTDAFDSGHRILLFSQFTSMLEIIKQFLDQKSVEYFYLDGSTKAQDRVEMVKA 980 Query: 104 WNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKR 163 +N+G L + G GLNL G ++++ F WW+ Q +R + G K Sbjct: 981 FNQGTGKLFLISLKAGGTGLNLT-GADMVIHFDPWWNPAVEDQASDR-----AHRIGQKN 1034 Query: 164 AVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 V V LI Q TI++ + + + K + D ++ Sbjct: 1035 VVQVMKLITQGTIEDKIFELQQKKKEMIDSVIQ 1067 >gi|239986923|ref|ZP_04707587.1| SNF2/RAD54 family helicase [Streptomyces roseosporus NRRL 11379] Length = 914 Score = 143 bits (361), Expect = 1e-32, Method: Composition-based stats. Identities = 40/209 (19%), Positives = 79/209 (37%), Gaps = 23/209 (11%) Query: 3 QYHKFQRELYCDLQGENIEAFNSA--SKTVKCLQLANG-AVYYDEEKHWKEVHDEKIKAL 59 Y RE ++G A Q+ N A Y EE K+ L Sbjct: 688 LYEAAVRETMAQIEGAEGIARRGLIMKLLTSLKQICNHPAQYLKEEPTRLTGRSGKLALL 747 Query: 60 EVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTLD-----------KDPCTIQEWNE 106 + +++ + +++ + S ARL A R + + + + Sbjct: 748 DELLDTILSEDGSVLIFTQYVSM-ARLLSAHLASRAIPSQLLHGGTPVPERERMVDRFQS 806 Query: 107 GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVF 166 ++P+ + G GLNL + +V F WW+ +Q +R + G + V Sbjct: 807 AEVPVFLLSLKAAGTGLNLTRAAH-VVHFDRWWNPAVEEQATDR-----AYRIGQTQPVQ 860 Query: 167 VYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 V+ +I + T+++ + + L +K + D +L Sbjct: 861 VHRIITEGTVEDRIAELLESKRALADAVL 889 >gi|312128395|ref|YP_003993269.1| SNF2-like protein [Caldicellulosiruptor hydrothermalis 108] gi|311778414|gb|ADQ07900.1| SNF2-related protein [Caldicellulosiruptor hydrothermalis 108] Length = 1139 Score = 143 bits (361), Expect = 1e-32, Method: Composition-based stats. Identities = 41/214 (19%), Positives = 87/214 (40%), Gaps = 27/214 (12%) Query: 2 KQYHKF----QRELYCDLQGENIEAFNSA--SKTVKCLQLANGAVYYDEEKHWKEVHDEK 55 K Y +F ++E+ ++ E S + Q+ E+ + K Sbjct: 917 KIYKQFLVSAKKEIEKEIDSAGFEKSQIKIFSLLTRLRQICCHPKLVFED---YKGSSGK 973 Query: 56 IKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTL----------DKDPCTIQE 103 ++AL+ I++ + +I+ + S L+ ++K + + L + + Sbjct: 974 LEALKEILQDCLESGHRVIIYSQWTSMLSIIKKMLDKEKILYFYLDGATKAEDRVEMVNS 1033 Query: 104 WNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKR 163 +N G+ + + G GLN+ G ++++ F WW+ Q R + G K Sbjct: 1034 FNSGERNVFLLSLKAGGFGLNIT-GADVVIHFDAWWNPAVENQATAR-----AHRLGQKN 1087 Query: 164 AVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 V + +I +N+I+E +L + K + D L+ A Sbjct: 1088 VVQSFKIITKNSIEEKILALQQKKKDLFDSLIEA 1121 >gi|168703233|ref|ZP_02735510.1| SNF2-related protein [Gemmata obscuriglobus UQM 2246] Length = 1098 Score = 143 bits (361), Expect = 1e-32, Method: Composition-based stats. Identities = 44/215 (20%), Positives = 74/215 (34%), Gaps = 29/215 (13%) Query: 2 KQYHKFQRELYCDLQGENIEA------FNSASKTVKCLQLANGAVYYDEEKHWKEVHDEK 55 + Y + + L + ++ Q A D K K Sbjct: 876 QVYDELRDHYRASLLAHVDSVGLKRSQIQVLAALMRLRQAACHPGLID--KKRTGDASAK 933 Query: 56 IK----ALEVIIEKANAAPIIVAYHFNSDLARLQKA---------FPQGRTLDKDPCTIQ 102 + L+ + E +V F S L ++K + GRT D+D + Sbjct: 934 LDYLLPQLQELAES--GQKALVFSQFTSLLDIVRKRLTAEGIQFEYLDGRTRDRDKRVER 991 Query: 103 EWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFK 162 + L + G GLNL + WW+ Q I+R + G Sbjct: 992 FQTDPACKLFLVSLKAGGVGLNLT-AAEYVFLLDPWWNPAAEAQAIDR-----SYRIGQT 1045 Query: 163 RAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + VF Y LIA+ T++E VL+ ++K + D +L Sbjct: 1046 KPVFAYRLIARGTVEEKVLELQQSKRELADAILGG 1080 >gi|38637850|ref|NP_942824.1| helicase superfamily protein II [Ralstonia eutropha H16] gi|32527188|gb|AAP85938.1| putative helicase, superfamily II [Ralstonia eutropha H16] Length = 1106 Score = 143 bits (361), Expect = 1e-32, Method: Composition-based stats. Identities = 36/181 (19%), Positives = 73/181 (40%), Gaps = 22/181 (12%) Query: 29 TVKCLQLANGAVYYDEEKHWKEVHDEKIK----ALEVIIEKANAAPIIVAYHFNSDLARL 84 +K Q+ ++ + K+ L +IE+ I++ F S L + Sbjct: 894 LLKLRQVCCDPRLVKIKEAARIKESAKLDLLLHMLPELIEE--GRRILLFSQFTSMLDLI 951 Query: 85 QKA---------FPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFF 135 A G T D+ ++ + +G++PL + G GLNL + ++ + Sbjct: 952 AAALRNAGIPYVMLTGDTTDR-ITPVERFQQGEVPLFLISLKAGGVGLNLT-AADTVIHY 1009 Query: 136 SLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 WW+ Q +R + G + VFVY LI +++E ++ K+ + + +L Sbjct: 1010 DPWWNPAVENQATDR-----AHRLGQDKPVFVYKLITGGSVEEKIVAMQAQKAALAEAIL 1064 Query: 196 N 196 + Sbjct: 1065 S 1065 >gi|188532517|ref|YP_001906314.1| Putative helicase [Erwinia tasmaniensis Et1/99] gi|188027559|emb|CAO95406.1| Putative helicase [Erwinia tasmaniensis Et1/99] Length = 890 Score = 143 bits (361), Expect = 1e-32, Method: Composition-based stats. Identities = 36/175 (20%), Positives = 75/175 (42%), Gaps = 18/175 (10%) Query: 33 LQLANGAVYYDEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQ 90 Q+ + + K H K+ L ++ A I++ F + L + + Sbjct: 703 RQICCDPRLLSDPRAEKVRHSAKLALLREMLRDLLAEDRRILIFSQFTTMLTIIAGELQK 762 Query: 91 ---------GRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDL 141 G T D++ ++ + +G++P+ + G GLNL + ++ + WW+ Sbjct: 763 AHIPFVTLTGSTRDRNE-PVRRFQQGEVPVFLISLKAGGVGLNLT-AADTVIHYDPWWNP 820 Query: 142 EEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 Q +R + G + VFVY LIA +TI+E ++ + K+ + + +L+ Sbjct: 821 AAENQATDR-----AYRLGQDKPVFVYKLIAADTIEEKIVALQQQKADLAEEILS 870 >gi|296163436|ref|ZP_06846189.1| SNF2-related protein [Burkholderia sp. Ch1-1] gi|295886324|gb|EFG66189.1| SNF2-related protein [Burkholderia sp. Ch1-1] Length = 1117 Score = 143 bits (361), Expect = 1e-32, Method: Composition-based stats. Identities = 33/180 (18%), Positives = 67/180 (37%), Gaps = 20/180 (11%) Query: 29 TVKCLQLANGAVYYDEEKHWKEVHDEKI----KALEVIIEKANAAPIIVAYHFNSDLARL 84 +K Q+ + + K+ + L +IE+ I++ F L + Sbjct: 905 LLKLRQVCCDPRLVKISQAARIKESAKLALLLEMLPELIEE--GRRILLFSQFTGMLELI 962 Query: 85 QKAFPQGRT--------LDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFS 136 A + I+ + + +PL + G GLNL + ++ + Sbjct: 963 AAALNEAGIPYVVLTGDTTDRRTPIRRFQQRAVPLFLISLKAGGVGLNLT-AADTVIHYD 1021 Query: 137 LWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 WW+ Q +R + G + VFVY LI +++E ++ K+ + D +L+ Sbjct: 1022 PWWNPAVENQATDR-----AHRLGQDKPVFVYKLITAGSVEEKIVAMQEQKAALADAILS 1076 >gi|194466323|ref|ZP_03072310.1| Non-specific serine/threonine protein kinase [Lactobacillus reuteri 100-23] gi|194453359|gb|EDX42256.1| Non-specific serine/threonine protein kinase [Lactobacillus reuteri 100-23] Length = 1162 Score = 143 bits (361), Expect = 1e-32, Method: Composition-based stats. Identities = 49/213 (23%), Positives = 88/213 (41%), Gaps = 27/213 (12%) Query: 3 QYHKFQRELYCDLQGENIE-----AFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIK 57 Y + L +Q +N E ++ + +L D KIK Sbjct: 941 LYQARAQRLIRQIQKQNDEEFQQNKLAVLAEITRLRELCCSPQLLDRG---YSGPSGKIK 997 Query: 58 ALEVII--EKANAAPIIVAYHFNSDLARLQKAFPQ---------GRTLDKDP-CTIQEWN 105 A +I E A+ I++ F S LA L++ + G+T D + E+N Sbjct: 998 ATMNLIKDEVADNHKILLFSQFTSALAILKEKLAKAGIKYFVIEGKTKKADRLQFVDEFN 1057 Query: 106 EGKIP-LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA 164 P + + G GLNL ++++ F WW++ Q +R + G K Sbjct: 1058 SYDQPAVFLISLKAGGTGLNLT-SADVVIHFDPWWNIAAENQATDR-----AHRIGQKNN 1111 Query: 165 VFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 V +Y +IAQNTI+E +++ + K+ + + +L+ Sbjct: 1112 VTIYKMIAQNTIEEKIIEMQQKKAALANSILSG 1144 >gi|294628099|ref|ZP_06706659.1| SNF2/helicase domain-containing protein [Streptomyces sp. e14] gi|292831432|gb|EFF89781.1| SNF2/helicase domain-containing protein [Streptomyces sp. e14] Length = 906 Score = 143 bits (361), Expect = 1e-32, Method: Composition-based stats. Identities = 39/208 (18%), Positives = 79/208 (37%), Gaps = 21/208 (10%) Query: 3 QYHKFQRELYCDLQGENIEAFNSAS--KTVKCLQLANG-AVYYDEEKHWKEVHDEKIKAL 59 Y RE ++ G A Q+ N A + E++ K++ L Sbjct: 679 LYEALVRETLAEISGAGGMARRGLVVKLLTGLKQICNHPAQFLKEDRPRIAGRSGKLELL 738 Query: 60 EVIIEK--ANAAPIIVAYHFNSDLARLQKAFP----------QGRTLDKDPCTIQEWNEG 107 + ++ A A ++V + +++ G + ++ + +G Sbjct: 739 DELLGTILAEGAGVLVFTQYVRMARLIERHLAARGVPSQFLHGGTPVAGREDMVRRFQDG 798 Query: 108 KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFV 167 + P+ + G GLNL + +V + WW+ Q +R + G R V V Sbjct: 799 EAPVFLLSLKAAGTGLNLTRAEH-VVHYDRWWNPAVEAQATDR-----AYRIGQSRPVQV 852 Query: 168 YYLIAQNTIDELVLQRLRTKSTIQDLLL 195 + LIA+ T+++ + LR K + + +L Sbjct: 853 HRLIAEGTVEDRIAGLLRRKQDLAETVL 880 >gi|302879469|ref|YP_003848033.1| SNF2-related protein [Gallionella capsiferriformans ES-2] gi|302582258|gb|ADL56269.1| SNF2-related protein [Gallionella capsiferriformans ES-2] Length = 1100 Score = 143 bits (361), Expect = 1e-32, Method: Composition-based stats. Identities = 32/178 (17%), Positives = 69/178 (38%), Gaps = 16/178 (8%) Query: 29 TVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQK 86 +K Q+ K K+ L ++ + + I+V F S L ++ Sbjct: 902 LLKLRQVCCDPRLLKLTSAKKVKEHAKLDLLMEMLPELVSEGRRILVFSQFTSMLELIEG 961 Query: 87 AFPQGRTL--------DKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLW 138 + + ++++ +G++P+ + G GLNL + ++ + W Sbjct: 962 ELTKEKLTYVKLTGDTQNREEVVRQFQDGEVPIFLISLKAGGVGLNLT-SADTVIHYDPW 1020 Query: 139 WDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 W+ Q +R + G + VFVY L+ +I+E +L K+ + +L+ Sbjct: 1021 WNPAVENQATDR-----AHRLGQTKNVFVYKLVVAGSIEEKILALQEKKAELAAGILS 1073 >gi|302386693|ref|YP_003822515.1| SNF2-related protein [Clostridium saccharolyticum WM1] gi|302197321|gb|ADL04892.1| SNF2-related protein [Clostridium saccharolyticum WM1] Length = 1047 Score = 143 bits (360), Expect = 2e-32, Method: Composition-based stats. Identities = 32/184 (17%), Positives = 73/184 (39%), Gaps = 25/184 (13%) Query: 26 ASKTVKCLQLAN--GAVYYDEEKHWKEVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDL 81 + + Q+ Y + + K++ +I I++ F S L Sbjct: 854 LAALTRLRQICCDPHLCYNNYKGE-----SAKLETCMDLIRNGVEGGHKILLFSQFTSML 908 Query: 82 ARLQKAFPQ----------GRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNI 131 +++ + ++ + + + +IPL + G GLNL ++ Sbjct: 909 EIMEQRLKKEAVPYYMLTGATPKEERLHMVNSFKDDEIPLFLISLKAGGTGLNLT-AADV 967 Query: 132 LVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQ 191 ++ F WW++ Q +R + G ++ V V+ LI +NTI+E +L+ +K + Sbjct: 968 VIHFDPWWNVAAQNQATDR-----AHRIGQEKQVSVFKLITKNTIEENILKLQESKKDLA 1022 Query: 192 DLLL 195 + ++ Sbjct: 1023 EQII 1026 >gi|257069450|ref|YP_003155705.1| DNA/RNA helicase, superfamily II, SNF2 family [Brachybacterium faecium DSM 4810] gi|256560268|gb|ACU86115.1| DNA/RNA helicase, superfamily II, SNF2 family [Brachybacterium faecium DSM 4810] Length = 1110 Score = 143 bits (360), Expect = 2e-32, Method: Composition-based stats. Identities = 45/208 (21%), Positives = 83/208 (39%), Gaps = 21/208 (10%) Query: 6 KFQRELYCDLQGENIEAFNSAS--KTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVII 63 + +R+ L +++ +A D E + +V K++AL + Sbjct: 896 QRERKKVLGLIDTDLDRSRFIVFRSLTLLRMMALDPSLVDPEA-YADVPSSKLEALFDRL 954 Query: 64 EK--ANAAPIIVAYHFNSDLA---------RLQKAFPQGRTLDKDPCTIQEWNEGKIPLL 112 E+ + +++ F S L ++ A G T D+D + + EG P+ Sbjct: 955 EEVIGDGHRVLLFSQFTSYLDQVASELERREVRYAHLDGSTRDRD-AAVAGFREGDAPVF 1013 Query: 113 FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIA 172 + G GL L + + WW+ Q ++R + G R V VY +IA Sbjct: 1014 LISLKAGGFGLTLTE-ADYVFLLDPWWNPAAENQAVDR-----AHRIGQDRTVMVYRMIA 1067 Query: 173 QNTIDELVLQRLRTKSTIQDLLLNALKK 200 ++TI+E VL R K+ + D L + + Sbjct: 1068 EDTIEEKVLALQRRKAELFDALTDGGEA 1095 >gi|328957397|ref|YP_004374783.1| putative ATP-binding SNF2 helicase or protein kinase [Carnobacterium sp. 17-4] gi|328673721|gb|AEB29767.1| putative ATP-binding SNF2 helicase or protein kinase [Carnobacterium sp. 17-4] Length = 1075 Score = 143 bits (360), Expect = 2e-32, Method: Composition-based stats. Identities = 45/207 (21%), Positives = 88/207 (42%), Gaps = 23/207 (11%) Query: 3 QYHKFQRELYCDLQGENIEA--FNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 Y + +E + G + + + Q+ + ++ E K++ L+ Sbjct: 852 AYLQRIQESVNSMNGAEFKKNRIEILAGLTRLRQICCDPKLFIDD---YEGSSGKLEQLK 908 Query: 61 VIIEKA--NAAPIIVAYHFNSDLARLQKAFPQ---------GRTLDKDP-CTIQEWNEGK 108 I+ A N I++ F S LA ++K + G+T K+ + ++N G+ Sbjct: 909 ETIQTARENGRRILIFSQFTSMLAIIEKELDEQEVETFYLSGQTKPKERIEMVNKFNAGE 968 Query: 109 IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVY 168 + + G GLNL G ++++ + LWW+ +Q R + G K+ V V Sbjct: 969 KDVFLISLKAGGTGLNLT-GADMVILYDLWWNPAVEEQAAGR-----AHRIGQKKVVQVL 1022 Query: 169 YLIAQNTIDELVLQRLRTKSTIQDLLL 195 LIA+ TI+E + Q + K + D ++ Sbjct: 1023 RLIAEGTIEEKIDQLQQEKKALFDQII 1049 >gi|283458684|ref|YP_003363319.1| superfamily II DNA/RNA helicase [Rothia mucilaginosa DY-18] gi|283134734|dbj|BAI65499.1| superfamily II DNA/RNA helicase [Rothia mucilaginosa DY-18] Length = 1388 Score = 143 bits (360), Expect = 2e-32, Method: Composition-based stats. Identities = 46/213 (21%), Positives = 85/213 (39%), Gaps = 31/213 (14%) Query: 2 KQYH---KFQRELYC----DLQGENIEAFNSASKTVKCLQLANGAVYYDEE---KHWKEV 51 + Y + +R+ D+ F S + +LA A D E Sbjct: 1163 RIYDTHLQRERQKVLGLLEDMDKNRFTIFQSLTL---LRRLALDAALIDPEAYAGVSSVK 1219 Query: 52 HDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQ---------GRTLDKDPCTIQ 102 D ++ L ++EK ++V F L + + G T ++ I+ Sbjct: 1220 RDYLVQQLPDLLEK--GHRVLVFSQFTGYLKSISARLAKEGIGHLYLDGSTRNRAE-VIE 1276 Query: 103 EWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFK 162 + G+ P+ + G GLNL ++ + WW+ QQ ++RI + G Sbjct: 1277 AFTSGQEPVFLISLKAGGFGLNLTEADHVFIM-DPWWNPAAEQQAVDRI-----HRIGQD 1330 Query: 163 RAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 + V VY L+A+ TI+E V+Q +K+ + D ++ Sbjct: 1331 KEVHVYRLVAEGTIEEKVMQLKESKAALFDAVV 1363 >gi|146308259|ref|YP_001188724.1| non-specific serine/threonine protein kinase [Pseudomonas mendocina ymp] gi|145576460|gb|ABP85992.1| Non-specific serine/threonine protein kinase [Pseudomonas mendocina ymp] Length = 876 Score = 143 bits (360), Expect = 2e-32, Method: Composition-based stats. Identities = 36/181 (19%), Positives = 72/181 (39%), Gaps = 19/181 (10%) Query: 29 TVKCLQLANGA-VYYDEEKHWKEVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQ 85 ++ Q + D K+ AL ++E+ +++ F S LA ++ Sbjct: 682 LLRLRQSCCDLRLLGDAGSQLTAADSGKLSALLDMLEELVDEGRRVLLFSQFTSMLALIE 741 Query: 86 KAF---------PQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFS 136 G T D+ ++ + G+ P+ + G GLNL + ++ F Sbjct: 742 AELQARKIAYAKLTGSTQDRR-TPVERFQAGEFPVFLISLKAGGSGLNLT-AADTVIHFD 799 Query: 137 LWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 WW+ Q +R + G + VFVY LI + +++E + Q + K+++ +L Sbjct: 800 PWWNPAAEAQASDR-----AYRIGQDKPVFVYKLITRGSVEEKIQQLQQAKASLARGVLE 854 Query: 197 A 197 Sbjct: 855 G 855 >gi|222528487|ref|YP_002572369.1| non-specific serine/threonine protein kinase [Caldicellulosiruptor bescii DSM 6725] gi|222455334|gb|ACM59596.1| Non-specific serine/threonine protein kinase [Caldicellulosiruptor bescii DSM 6725] Length = 1139 Score = 142 bits (359), Expect = 2e-32, Method: Composition-based stats. Identities = 42/214 (19%), Positives = 89/214 (41%), Gaps = 27/214 (12%) Query: 2 KQYHKF----QRELYCDLQGENIEAFNSA--SKTVKCLQLANGAVYYDEEKHWKEVHDEK 55 K Y +F ++E+ ++ E S + Q+ E+ + K Sbjct: 917 KIYKQFLVSAKKEIEKEIDSVGFEKSQIKIFSLLTRLRQICCHPKLVFED---YKGSSGK 973 Query: 56 IKALEVIIEKA--NAAPIIVAYHFNSDLARLQKAFPQGRTL----------DKDPCTIQE 103 ++AL+ I++ + + +I+ + S L+ ++K + + L + + Sbjct: 974 MEALKEILQDSLESGHRVIIYSQWTSMLSIIKKMLDKEKILYFYLDGATKAEDRVEMVNR 1033 Query: 104 WNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKR 163 +N G+ + + G GLN+ G ++++ F WW+ Q R + G K Sbjct: 1034 FNSGERNVFLLSLKAGGFGLNIT-GADVVIHFDAWWNPAVENQATAR-----AHRLGQKN 1087 Query: 164 AVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 V + +IA+N+I+E +L + K + D L+ A Sbjct: 1088 VVQSFKIIAKNSIEEKILALQQKKKDLFDSLIEA 1121 >gi|170739234|ref|YP_001767889.1| non-specific serine/threonine protein kinase [Methylobacterium sp. 4-46] gi|168193508|gb|ACA15455.1| Non-specific serine/threonine protein kinase [Methylobacterium sp. 4-46] Length = 1120 Score = 142 bits (359), Expect = 2e-32, Method: Composition-based stats. Identities = 38/179 (21%), Positives = 69/179 (38%), Gaps = 19/179 (10%) Query: 29 TVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQK 86 +K Q K K+ L+ ++E A ++V F S L ++ Sbjct: 930 LLKLRQACCDPRLLKLAPPPKAG-SAKLDRLDELLESLIAEGRRVLVFSQFTSMLDLIKP 988 Query: 87 AF---------PQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSL 137 GR+ D+ ++ + G+ P+ + G GLNL + ++ + Sbjct: 989 RLTLAKTPCLELTGRSRDRAE-VVRRFEAGEAPVFLISLKAGGTGLNL-VAADTVILYDP 1046 Query: 138 WWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 WW+ Q I+R + G + VFV+ L+A TI+E + K + D L + Sbjct: 1047 WWNPAVEAQAIDR-----AHRIGQDKPVFVHKLVASRTIEEKMGVLKERKGALADSLFD 1100 >gi|220910355|ref|YP_002485666.1| Non-specific serine/threonine protein kinase [Cyanothece sp. PCC 7425] gi|219866966|gb|ACL47305.1| Non-specific serine/threonine protein kinase [Cyanothece sp. PCC 7425] Length = 1403 Score = 142 bits (359), Expect = 2e-32, Method: Composition-based stats. Identities = 36/213 (16%), Positives = 78/213 (36%), Gaps = 25/213 (11%) Query: 1 MKQYHKFQRELYCDLQGENIEA----FNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKI 56 M Y +++ L + A ++ +K + A + + K+ Sbjct: 1179 MAFYEALRQQAITKLSESDATAGAKHLQVLAEIMKLRRACCNARLVMPDTP---LPSAKL 1235 Query: 57 KALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTLD----------KDPCTIQEW 104 + ++E+ AN +V F L ++ + + + + + Sbjct: 1236 QLFGEVLEELLANQHKALVFSQFVDHLQLIRAYLEEQKITYQYLDGSTPAAERKKRVDAF 1295 Query: 105 NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA 164 G+ + + G GLNL + ++ WW+ Q +R + G R Sbjct: 1296 QAGQGDVFLISLKAGGTGLNLT-AADYVIHMDPWWNPAVEDQASDR-----AHRIGQHRP 1349 Query: 165 VFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 V +Y L+A++TI+E ++ + K + D LL+ Sbjct: 1350 VTIYRLVAKHTIEEKIVDLHQHKRDLADSLLDG 1382 >gi|326332924|ref|ZP_08199181.1| SNF2/helicase domain protein [Nocardioidaceae bacterium Broad-1] gi|325949282|gb|EGD41365.1| SNF2/helicase domain protein [Nocardioidaceae bacterium Broad-1] Length = 1055 Score = 142 bits (359), Expect = 2e-32, Method: Composition-based stats. Identities = 47/211 (22%), Positives = 80/211 (37%), Gaps = 24/211 (11%) Query: 2 KQYHK---FQRELYCDLQGE-NIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIK 57 K Y +R+ L + N S + QL+ D E V K+ Sbjct: 836 KIYDAHLAKERQRILHLLDDFNDNRVAILSALTRLRQLSLDPGLVDPEDD--HVGSAKLD 893 Query: 58 ALEVIIEK--ANAAPIIVAYHFNSDLAR---------LQKAFPQGRTLDKDPCTIQEWNE 106 L IE+ A +V F S L R + A+ G T D+ I+ + + Sbjct: 894 TLVDHIEELAAEGHKALVFSQFTSFLGRARTRLAEAGIDAAYLDGATRDR-GAVIESFRD 952 Query: 107 GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVF 166 G P+ + G GL L + V WW+ Q ++R + G + V Sbjct: 953 GDAPVFLISLKAGGVGLTLTEADYVFVL-DPWWNPAAEAQAVDR-----AHRIGQTQHVM 1006 Query: 167 VYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 VY L++ +TI+E V++ K+ + +++ Sbjct: 1007 VYRLVSTDTIEEKVMELKERKAELFAKVVDG 1037 >gi|119897130|ref|YP_932343.1| SWI/SNF family helicase [Azoarcus sp. BH72] gi|119669543|emb|CAL93456.1| SWI/SNF family helicase [Azoarcus sp. BH72] Length = 1098 Score = 142 bits (359), Expect = 2e-32, Method: Composition-based stats. Identities = 34/180 (18%), Positives = 70/180 (38%), Gaps = 19/180 (10%) Query: 29 TVKCLQLANGA-VYYDEEKHWKEVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQ 85 +K Q+ + K K+ L ++ + I+V F LA + Sbjct: 902 LLKLRQVCCDPRLLKTTAAAAKVKERAKLDLLMSMLPELIDEGRRILVFSQFTQMLALIA 961 Query: 86 KAFPQGR---------TLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFS 136 + + T D+ ++++ +G+ P+ + G GLNL + ++ + Sbjct: 962 AELDKAKIGWVALTGDTRDRR-IPVEDFQKGRAPVFLISLKAGGVGLNLTT-ADTVIHYD 1019 Query: 137 LWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 WW+ Q +R + G + VFV+ LI +I+E +L K+ + +L+ Sbjct: 1020 PWWNPAAENQATDR-----AHRIGQDKPVFVFKLICAGSIEERILSLQDKKAALAASVLS 1074 >gi|254384222|ref|ZP_04999566.1| SNF2/RAD54 family helicase [Streptomyces sp. Mg1] gi|194343111|gb|EDX24077.1| SNF2/RAD54 family helicase [Streptomyces sp. Mg1] Length = 936 Score = 142 bits (359), Expect = 3e-32, Method: Composition-based stats. Identities = 34/182 (18%), Positives = 74/182 (40%), Gaps = 19/182 (10%) Query: 27 SKTVKCLQLANG-AVYYDEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLAR 83 Q+ N A Y EE+ K+ L+ +++ A ++V + + Sbjct: 736 KLLASLKQICNHPAQYLKEEQPRIAHRSGKLALLDELLDTILAEGGSVLVFTQYVTMARL 795 Query: 84 LQKAFP----------QGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILV 133 +++ G + + + + G++P+ + G GLNL G+ ++ Sbjct: 796 IERHLAARGIANQLLHGGTPVPRREELVDRFQAGEVPVFLLSLKAAGTGLNLTRAGH-VI 854 Query: 134 FFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDL 193 F WW+ +Q +R + G + V V+ +IA+ T+++ + + L K + D Sbjct: 855 HFDRWWNPAVEEQATDR-----AYRIGQTQPVQVHRIIAEGTVEDRIAEMLEAKRALADA 909 Query: 194 LL 195 +L Sbjct: 910 VL 911 >gi|300784409|ref|YP_003764700.1| SNF2/RAD54 family helicase [Amycolatopsis mediterranei U32] gi|299793923|gb|ADJ44298.1| SNF2/RAD54 family helicase [Amycolatopsis mediterranei U32] Length = 933 Score = 142 bits (358), Expect = 3e-32, Method: Composition-based stats. Identities = 39/210 (18%), Positives = 76/210 (36%), Gaps = 21/210 (10%) Query: 3 QYHKFQRELYCDLQGENIEA--FNSASKTVKCLQLANG-AVYYDEEKHWKEVHDEKIKAL 59 Y RE +++ + Q+ N A + E K+ A Sbjct: 708 LYEAVVRENLAEIRETQGIKRRGQVLQLLNELKQICNHPAQFLKEPHGALTGRSGKLAAF 767 Query: 60 EVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQG----------RTLDKDPCTIQEWNEG 107 E +++ ++V + L++ R+ K + + G Sbjct: 768 EELLDVILDEGESVLVFSQYVQLCRLLERRLKDRGLPTELLSGERSPAKRQDMVDRFQAG 827 Query: 108 KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFV 167 +IP+ + G GLNL + ++ + WW+ Q +R + G R V V Sbjct: 828 EIPVFLLSLKAGGVGLNLTRATH-VIHYDRWWNPAVEDQATDR-----AYRIGQDRPVQV 881 Query: 168 YYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + LIA+ T++E + Q L K + + ++ A Sbjct: 882 HRLIAEGTLEERIAQVLEKKRGLAESIVGA 911 >gi|163791108|ref|ZP_02185528.1| Snf2 family protein [Carnobacterium sp. AT7] gi|159873664|gb|EDP67748.1| Snf2 family protein [Carnobacterium sp. AT7] Length = 1075 Score = 142 bits (358), Expect = 3e-32, Method: Composition-based stats. Identities = 45/207 (21%), Positives = 87/207 (42%), Gaps = 23/207 (11%) Query: 3 QYHKFQRELYCDLQGENIEA--FNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 Y + +E + G + + + Q+ + ++ E K++ L+ Sbjct: 852 AYLQRIQESVNSMNGAEFKKNRIEILAGLTRLRQICCDPKLFIDD---YEGDSGKLEQLK 908 Query: 61 VIIEKA--NAAPIIVAYHFNSDLARLQKAFPQ---------GRTLDKDP-CTIQEWNEGK 108 ++ A N I++ F S LA ++K Q G+T K+ + +N G+ Sbjct: 909 ETVQTARENGRRILIFSQFTSMLAIIEKELAQQSVETFYLSGQTKPKERIEMVNRFNAGE 968 Query: 109 IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVY 168 + + G GLNL G ++++ + LWW+ +Q R + G K+ V V Sbjct: 969 KEVFLISLKAGGTGLNLT-GADMVILYDLWWNPAVEEQAAGR-----AHRIGQKKVVQVL 1022 Query: 169 YLIAQNTIDELVLQRLRTKSTIQDLLL 195 LIA+ TI+E + Q + K + D ++ Sbjct: 1023 RLIAEGTIEEKIDQLQQEKKALFDQII 1049 >gi|226360762|ref|YP_002778540.1| helicase [Rhodococcus opacus B4] gi|226239247|dbj|BAH49595.1| putative helicase [Rhodococcus opacus B4] Length = 1073 Score = 142 bits (358), Expect = 3e-32, Method: Composition-based stats. Identities = 44/210 (20%), Positives = 80/210 (38%), Gaps = 22/210 (10%) Query: 2 KQYH---KFQRELYCDLQGE-NIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIK 57 K Y + +R+ L + + F QL+ A D+E + +V K+ Sbjct: 854 KVYDTHLQRERQKILGLLADVDKNRFTILQSLTLLRQLSLDAGLVDDE--YHDVPSAKVD 911 Query: 58 ALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTLD--------KDPCTIQEWNEG 107 AL + A +V F L +++ + ++++ EG Sbjct: 912 ALLEQLADVVAGGHRALVFSQFTGFLGKVRDRLDDAGIAHAYLDGATRRRGDVLRDFKEG 971 Query: 108 KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFV 167 P+ + G GLNL + WW+ Q ++R + G R V V Sbjct: 972 DAPVFLISLKAGGFGLNLTEADYCFIL-DPWWNPATEAQAVDR-----AHRIGQTRNVMV 1025 Query: 168 YYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 Y LIA++TI++ V+ KS + +++A Sbjct: 1026 YRLIAKDTIEDKVMALKAKKSALFSSVMDA 1055 >gi|328881666|emb|CCA54905.1| Helicase, SNF2 or RAD54 family [Streptomyces venezuelae ATCC 10712] Length = 948 Score = 142 bits (358), Expect = 3e-32, Method: Composition-based stats. Identities = 38/219 (17%), Positives = 77/219 (35%), Gaps = 27/219 (12%) Query: 3 QYHKFQRELYCDLQGENIEAFNSAS--KTVKCLQLANGAVYY-------DEEKHWKEVHD 53 Y RE ++ A Q+ N Y Sbjct: 716 LYEAVVRETMAQIEEAEGMARRGLVMKLLTSLKQICNHPAQYLKEAAPRGSGTARLAGRS 775 Query: 54 EKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFP----------QGRTLDKDPCTI 101 K+ L+ +++ A ++V + S L G + + + Sbjct: 776 GKLALLDELLDTILAEDGSVLVFTQYVSMARLLADHLAARGIQAQLLHGGTPVAERERMV 835 Query: 102 QEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGF 161 + G++P+ + G GLNL G+ +V + WW+ +Q +R + G Sbjct: 836 DRFQAGEVPVFLLSLKAAGTGLNLTRAGH-VVHYDRWWNPAVEEQATDR-----AYRIGQ 889 Query: 162 KRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKK 200 + V V+ L+A+ T+++ + + LR K + D +L + + Sbjct: 890 TQPVQVHRLVAEGTVEDRIAEMLRAKRALADAVLGSGEA 928 >gi|312623213|ref|YP_004024826.1| SNF2-like protein [Caldicellulosiruptor kronotskyensis 2002] gi|312203680|gb|ADQ47007.1| SNF2-related protein [Caldicellulosiruptor kronotskyensis 2002] Length = 1140 Score = 142 bits (358), Expect = 3e-32, Method: Composition-based stats. Identities = 42/214 (19%), Positives = 87/214 (40%), Gaps = 27/214 (12%) Query: 2 KQYHKF----QRELYCDLQGENIEAFNSA--SKTVKCLQLANGAVYYDEEKHWKEVHDEK 55 K Y +F ++E+ ++ E S + Q+ E+ + K Sbjct: 917 KIYKQFLVSAKKEIEKEIDSAGFEKSQIKIFSLLTRLRQICCHPKLVFED---YKGSSGK 973 Query: 56 IKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTL----------DKDPCTIQE 103 ++AL+ I++ + +I+ + S L+ + K + + L + + Sbjct: 974 MEALKEILQDCLESGHRVIIYSQWTSMLSIINKMLDKEKILYFYLDGATKAEDRVEMVNR 1033 Query: 104 WNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKR 163 +N G+ + + G GLN+ G ++++ F WW+ Q R + G K Sbjct: 1034 FNSGERNVFLLSLKAGGFGLNIT-GADVVIHFDAWWNPAVENQATAR-----AHRLGQKN 1087 Query: 164 AVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 V + +IA+N+I+E +L + K + D L+ A Sbjct: 1088 VVQSFKIIAKNSIEEKILALQQKKKDLFDSLIEA 1121 >gi|302871105|ref|YP_003839741.1| SNF2-related protein [Caldicellulosiruptor obsidiansis OB47] gi|302573964|gb|ADL41755.1| SNF2-related protein [Caldicellulosiruptor obsidiansis OB47] Length = 1139 Score = 142 bits (358), Expect = 3e-32, Method: Composition-based stats. Identities = 42/214 (19%), Positives = 88/214 (41%), Gaps = 27/214 (12%) Query: 2 KQYHKF----QRELYCDLQGENIEAFNSA--SKTVKCLQLANGAVYYDEEKHWKEVHDEK 55 K Y +F ++E+ ++ E S + Q+ E+ + K Sbjct: 917 KIYKQFLVSAKKEIEKEIDSAGFEKSQIKIFSLLTRLRQICCHPKLVFED---YKGSSGK 973 Query: 56 IKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTL----------DKDPCTIQE 103 ++AL+ I++ + +I+ + S L+ ++K + + L + + Sbjct: 974 MEALKEILQDCLESGHRVIIYSQWTSMLSIIKKMLDKEKILYFYLDGATKAEDRVEMVNR 1033 Query: 104 WNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKR 163 +N G+ + + G GLN+ G ++++ F WW+ Q R + G K Sbjct: 1034 FNSGEKNVFLLSLKAGGFGLNIT-GADVVIHFDAWWNPAVENQATAR-----SHRLGQKN 1087 Query: 164 AVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 V + +IA+N+I+E +L + K + D L+ A Sbjct: 1088 VVQSFKIIAKNSIEEKILALQQKKKDLFDSLIEA 1121 >gi|262371025|ref|ZP_06064348.1| helicase superfamily protein II [Acinetobacter johnsonii SH046] gi|262314101|gb|EEY95145.1| helicase superfamily protein II [Acinetobacter johnsonii SH046] Length = 1115 Score = 142 bits (357), Expect = 3e-32, Method: Composition-based stats. Identities = 38/213 (17%), Positives = 79/213 (37%), Gaps = 25/213 (11%) Query: 2 KQYHKFQRELYCDLQGENIEA------FNSASKTVKCLQLANGAVYYD-EEKHWKEVHDE 54 K Y + + +Q E +K Q+ + + + Sbjct: 889 KLYEAVRATMQASIQKIVAEKGFKRSQIQILDALLKLRQVCCHPSLLKLDSVKIGQANSA 948 Query: 55 KIKALEVIIEKA--NAAPIIVAYHFNSDLARLQKAF---------PQGRTLDKDPCTIQE 103 K++ L ++ I++ F S L +++ G+T +D I Sbjct: 949 KLEQLMDMVVPMVEEGRKILIFSQFTSMLELIEQHLHYAEIGYVKLTGKTKKRDE-VITA 1007 Query: 104 WNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKR 163 + G++P+ + G GLNL + ++ + WW+ Q +R + G + Sbjct: 1008 FQSGQVPVFLISLKAGGVGLNLT-AADTVIHYDPWWNPAAEDQASDRAW-----RIGQNK 1061 Query: 164 AVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 VFVY LI +I+E ++ + K+ + +L+ Sbjct: 1062 PVFVYKLITNKSIEEKIIALQQNKAELAHSILS 1094 >gi|229489289|ref|ZP_04383153.1| SNF2 family helicase [Rhodococcus erythropolis SK121] gi|229323782|gb|EEN89539.1| SNF2 family helicase [Rhodococcus erythropolis SK121] Length = 1060 Score = 142 bits (357), Expect = 3e-32, Method: Composition-based stats. Identities = 45/204 (22%), Positives = 80/204 (39%), Gaps = 21/204 (10%) Query: 6 KFQRELYCDLQGE-NIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIE 64 + +R+ L + + F QL+ DEE V K+ AL ++ Sbjct: 848 QRERQKILGLLDDVDKNRFTILQSLTLLRQLSLDVSLVDEESGP--VPSAKVDALVEQLD 905 Query: 65 K--ANAAPIIVAYHFNS---------DLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLF 113 A ++ F D R+ ++ G T ++ ++E+ G +P+ Sbjct: 906 DVIAGGHRALIFSQFTGFLGSVRNRLDEERIPYSYLDGSTRNRGE-VLEEFKSGAVPVFL 964 Query: 114 AHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQ 173 + G GLNL + WW+ Q ++R + G R V VY LIA+ Sbjct: 965 ISLKAGGFGLNLTEADYCFIL-DPWWNPAAEAQAVDR-----THRIGQTRNVMVYRLIAK 1018 Query: 174 NTIDELVLQRLRTKSTIQDLLLNA 197 +TI+E V+ KS + +++A Sbjct: 1019 DTIEEKVMALKAKKSALFSNVMDA 1042 >gi|227529368|ref|ZP_03959417.1| SNF2 helicase associated domain protein [Lactobacillus vaginalis ATCC 49540] gi|227350725|gb|EEJ41016.1| SNF2 helicase associated domain protein [Lactobacillus vaginalis ATCC 49540] Length = 1173 Score = 142 bits (357), Expect = 4e-32, Method: Composition-based stats. Identities = 46/214 (21%), Positives = 87/214 (40%), Gaps = 27/214 (12%) Query: 2 KQYHKFQRELYCDLQGENIEAF-----NSASKTVKCLQLANGAVYYDEEKHWKEVHDEKI 56 K Y L LQ ++ E F ++ + QL + + K+ Sbjct: 951 KLYQARATRLVKRLQSQDDEEFKNNRFEMLAEITRLRQLCCSPKLLNAD---YRGRSGKV 1007 Query: 57 KALEVII--EKANAAPIIVAYHFNSDLARLQKAFPQ---------GRTLDKDPCT-IQEW 104 +I E A I++ F S LA L++ + G+T D ++E+ Sbjct: 1008 DQTMELIRDEIAAGHKILLFSQFTSALAILRQRIEKEQISDFVIEGKTKKSDRQAFVKEF 1067 Query: 105 NEGKIP-LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKR 163 N P + + G GLNL ++++ F WW++ Q +R + G + Sbjct: 1068 NTYNGPAIFLISLKAGGTGLNLT-SADVVIHFDPWWNVAAENQATDR-----AHRIGQQH 1121 Query: 164 AVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 V +Y +IA++TI+E ++ + KS + + +L+ Sbjct: 1122 NVSIYKMIAKDTIEERIIAMQKQKSELANAILSG 1155 >gi|254443232|ref|ZP_05056708.1| Type III restriction enzyme, res subunit family [Verrucomicrobiae bacterium DG1235] gi|198257540|gb|EDY81848.1| Type III restriction enzyme, res subunit family [Verrucomicrobiae bacterium DG1235] Length = 824 Score = 142 bits (357), Expect = 4e-32, Method: Composition-based stats. Identities = 38/222 (17%), Positives = 77/222 (34%), Gaps = 26/222 (11%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASK-------TVKCLQLANGAVYYDEEKHWKEVHDE 54 K Y ++ ++ + + ++ Q D K Sbjct: 602 KTYEAARQNAEAEISQLEKSGASEGALRMKTLTQLLRLRQTCCDPRLLD--KSLDATASS 659 Query: 55 KIKALEVIIEKA--NAAPIIVAYHFNS---------DLARLQKAFPQGRTLDKDPCTIQE 103 K+ + ++E++ I+V F S D + + G T ++ + Sbjct: 660 KLNSFLELLEESIDGGHRILVFSQFVSLLSILKEQLDSENIPYCYIDGSTRNRMAEVDRF 719 Query: 104 WNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKR 163 + IP+ + G GLNL + +V F WW+ Q +R + G + Sbjct: 720 NDSDDIPIFLISLKAGGTGLNLT-AADTVVHFDPWWNPAAEAQATDR-----AHRIGQTK 773 Query: 164 AVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIHV 205 V Y LI ++++E VLQ + K + + + A + + Sbjct: 774 VVTSYKLIVSDSVEEKVLQLQQQKRKLLEDVFEASEAANAKI 815 >gi|218960404|ref|YP_001740179.1| hypothetical protein CLOAM0057 [Candidatus Cloacamonas acidaminovorans] gi|167729061|emb|CAO79972.1| hypothetical protein CLOAM0057 [Candidatus Cloacamonas acidaminovorans] Length = 1065 Score = 142 bits (357), Expect = 4e-32, Method: Composition-based stats. Identities = 34/183 (18%), Positives = 72/183 (39%), Gaps = 17/183 (9%) Query: 26 ASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKAN--AAPIIVAYHFNSDLAR 83 + K Q+ N + + + K++ L ++ +A +++ F L+ Sbjct: 868 LAALTKLRQVCNHPHLANGDILPELEASSKLEQLLELVTEATNAGHKVLIFSQFVQMLSI 927 Query: 84 LQK---------AFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVF 134 ++K + G+T D+ +I L + G GLNL + ++ Sbjct: 928 IRKVLEANSLPYCYLDGQTKDRVTPIKSFETNPEIKLFLISLKAGGTGLNLT-AADTVIL 986 Query: 135 FSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 + WW+ Q I+R + G V V+ LI + T++E +LQ + K + + + Sbjct: 987 YDPWWNPMVENQAIDR-----THRIGQTHKVQVFRLITKGTVEEKILQLQQNKRELFETV 1041 Query: 195 LNA 197 + Sbjct: 1042 IEG 1044 >gi|255327378|ref|ZP_05368452.1| helicase/SNF2 family domain protein [Rothia mucilaginosa ATCC 25296] gi|255295658|gb|EET75001.1| helicase/SNF2 family domain protein [Rothia mucilaginosa ATCC 25296] Length = 1384 Score = 141 bits (356), Expect = 4e-32, Method: Composition-based stats. Identities = 45/213 (21%), Positives = 85/213 (39%), Gaps = 31/213 (14%) Query: 2 KQYH---KFQRELYC----DLQGENIEAFNSASKTVKCLQLANGAVYYDEE---KHWKEV 51 + Y + +R+ D+ F S + +LA A D + Sbjct: 1159 RIYDTHLQRERQKVLGLLEDMDKNRFTIFQSLTL---LRRLALDAALIDPDAYAGVSSVK 1215 Query: 52 HDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQ---------KAFPQGRTLDKDPCTIQ 102 D ++ L ++EK ++V F L + + G T ++ I+ Sbjct: 1216 RDYLVQQLPDLLEK--GHRVLVFSQFTGYLKSISVRLAEEGIGHLYLDGSTRNRAE-VIE 1272 Query: 103 EWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFK 162 + G+ P+ + G GLNL ++ + WW+ QQ ++RI + G Sbjct: 1273 AFTSGQEPVFLISLKAGGFGLNLTEADHVFIM-DPWWNPAAEQQAVDRI-----HRIGQD 1326 Query: 163 RAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 + V VY L+A+ TI+E V+Q +K+ + D ++ Sbjct: 1327 KEVHVYRLVAEGTIEEKVMQLKESKAALFDAVV 1359 >gi|168335382|ref|ZP_02693475.1| Non-specific serine/threonine protein kinase [Epulopiscium sp. 'N.t. morphotype B'] Length = 1031 Score = 141 bits (356), Expect = 4e-32, Method: Composition-based stats. Identities = 44/203 (21%), Positives = 88/203 (43%), Gaps = 23/203 (11%) Query: 8 QRELYCDLQGENIEAFNS--ASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEK 65 ++EL ++ ++ E + ++ Q+ + E+ K+++ II+ Sbjct: 819 KKELMAEIAEDSREKNTIKMLAALMRLRQICAHPSMFLED---YFGGSAKLESALEIIQD 875 Query: 66 --ANAAPIIVAYHFNSDLARL---------QKAFPQGRTLDKDP-CTIQEWNEGKIPLLF 113 +++ F S LA + + G KD ++E+NEG + + Sbjct: 876 CVEAGHKVLLFSQFTSMLAMISQKLHEKMIRHNTLXGDVRPKDRMKMVEEFNEGDMQVFL 935 Query: 114 AHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQ 173 + G GLNL +I++ + WW+L Q +R + G K V V+ LIA+ Sbjct: 936 ISLKAGGVGLNLT-AADIVIHYDPWWNLSAQNQATDR-----AYRMGQKNTVQVFKLIAK 989 Query: 174 NTIDELVLQRLRTKSTIQDLLLN 196 NTI+E + Q +K+ + + +L+ Sbjct: 990 NTIEEKIKQLQDSKALLSESILS 1012 >gi|167747531|ref|ZP_02419658.1| hypothetical protein ANACAC_02252 [Anaerostipes caccae DSM 14662] gi|167652893|gb|EDR97022.1| hypothetical protein ANACAC_02252 [Anaerostipes caccae DSM 14662] Length = 1117 Score = 141 bits (356), Expect = 5e-32, Method: Composition-based stats. Identities = 40/213 (18%), Positives = 80/213 (37%), Gaps = 26/213 (12%) Query: 2 KQYHKFQRELYCDLQGENIE-----AFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKI 56 K Y + + L ++ E S+ + QL ++ K V K Sbjct: 896 KLYDAHVKRMQLMLDKQSEEEFKSSKIQILSELTRLRQLCCSPELVFDQYTGKSV---KS 952 Query: 57 KALEVIIEKA--NAAPIIVAYHFNSDLARLQKAFPQGRT----------LDKDPCTIQEW 104 +I+ A I++ F S ++ L++ + +K ++++ Sbjct: 953 DLCIDLIKNAVSGGHKILLFSQFTSMISILEERLQAEKISFYTLTGSVNKEKRARMVEDF 1012 Query: 105 NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA 164 N + + G GLNL +I++ + WW+L Q +R + G + Sbjct: 1013 NNDDTSVFCISLKAGGTGLNLT-SADIVIHYDPWWNLAVQNQATDR-----AHRIGQENV 1066 Query: 165 VFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 V VY LI + TI++ +++ K + D +L Sbjct: 1067 VMVYRLIVEGTIEDNIVKLQEKKKELADQILGG 1099 >gi|114777053|ref|ZP_01452073.1| Superfamily II DNA/RNA helicase, SNF2 family protein [Mariprofundus ferrooxydans PV-1] gi|114552574|gb|EAU55034.1| Superfamily II DNA/RNA helicase, SNF2 family protein [Mariprofundus ferrooxydans PV-1] Length = 1095 Score = 141 bits (356), Expect = 5e-32, Method: Composition-based stats. Identities = 37/201 (18%), Positives = 74/201 (36%), Gaps = 20/201 (9%) Query: 5 HKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIE 64 K R+ + G +K Q+ K+ L ++ Sbjct: 880 QKRVRDAVASM-GVAQSQIVVLDALMKMRQVCCDPRLV-SGLQGALPASAKLTMLMEMLP 937 Query: 65 KA--NAAPIIVAYHFNSDLARLQKAF---------PQGRTLDKDPCTIQEWNEGKIPLLF 113 + +++ F S L ++ G+T D+ ++ + G++PL Sbjct: 938 EMIEEGRRVLLFSQFTSMLKLIEAEVTAAGIDYVKLTGQTRDR-ETPVERFQNGEVPLFL 996 Query: 114 AHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQ 173 + G GLNL + ++ + WW+ Q +R + G +AVFVY L+ + Sbjct: 997 ISLKAGGVGLNLT-AADTVIHYDPWWNPAVEAQATDR-----AHRIGQDKAVFVYKLLTE 1050 Query: 174 NTIDELVLQRLRTKSTIQDLL 194 T++E +L+ K + D + Sbjct: 1051 GTVEERILEMQDRKRELADSI 1071 >gi|320354706|ref|YP_004196045.1| SNF2-like protein [Desulfobulbus propionicus DSM 2032] gi|320123208|gb|ADW18754.1| SNF2-related protein [Desulfobulbus propionicus DSM 2032] Length = 1363 Score = 141 bits (356), Expect = 5e-32, Method: Composition-based stats. Identities = 33/212 (15%), Positives = 81/212 (38%), Gaps = 24/212 (11%) Query: 1 MKQYHKFQRELYCDLQGENIEA---FNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIK 57 ++ Y +++ +++G + + ++ ++ + +++ ++ K++ Sbjct: 1142 LQFYEALRQQAIENIEGSSEKTGRHLRILAEIMRLRRACCNPRLINDQ---VDIPSTKLQ 1198 Query: 58 ALEVIIEKA--NAAPIIVAYHFNSDLARLQ----------KAFPQGRTLDKDPCTIQEWN 105 +E+ ++ F LA ++ K + ++ + Sbjct: 1199 VFAETVEELLGGGHKALIFSQFTGHLALIRDFLDDRGISYKYLDGTTPAKERQQQVERFQ 1258 Query: 106 EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 G+ L + G GLNL + ++ WW+ Q +R + G KR V Sbjct: 1259 AGEGDLFLISLKAGGLGLNLT-AADYVIHMDPWWNPAVEDQAADR-----AYRIGQKRPV 1312 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 VY L+ NTI+E +++ + K + + LL Sbjct: 1313 TVYRLVTANTIEEKIVRLHQEKRDLANSLLEG 1344 >gi|229824793|ref|ZP_04450862.1| hypothetical protein GCWU000182_00142 [Abiotrophia defectiva ATCC 49176] gi|229791122|gb|EEP27236.1| hypothetical protein GCWU000182_00142 [Abiotrophia defectiva ATCC 49176] Length = 1073 Score = 141 bits (356), Expect = 5e-32, Method: Composition-based stats. Identities = 38/211 (18%), Positives = 83/211 (39%), Gaps = 23/211 (10%) Query: 1 MKQYHKFQRELYCDLQGENIEAFN--SASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKA 58 M ++++ ++ E + + Q+ + E E K+ Sbjct: 853 MSYLEDMKKKINNEINKNGFEKSRMMILASLTRLRQICCHPSTFLEN---YEGGSGKLSL 909 Query: 59 LEVIIEKA--NAAPIIVAYHFNSDLARLQKAFPQGRT----------LDKDPCTIQEWNE 106 L +++ A + I+V F S L +++ F + + + + ++ +N Sbjct: 910 LLQLVQNAVESGHRILVFSQFTSMLNLVEEEFKKLKISYYYLDGSTPIAQRSEDVKAFNN 969 Query: 107 GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVF 166 G + + G GLNL G ++++ + WW+ Q +R+ + G K +V Sbjct: 970 GSREVYLISLKAGGTGLNL-VGADMVIHYDPWWNPAVEDQATDRV-----YRIGQKNSVN 1023 Query: 167 VYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 V LI + TI+E + + K + D ++ A Sbjct: 1024 VVKLITKGTIEEKIYKLQEKKKNLADSVIKA 1054 >gi|90409119|ref|ZP_01217240.1| Snf2 family protein [Psychromonas sp. CNPT3] gi|90309770|gb|EAS37934.1| Snf2 family protein [Psychromonas sp. CNPT3] Length = 1080 Score = 141 bits (356), Expect = 5e-32, Method: Composition-based stats. Identities = 36/177 (20%), Positives = 70/177 (39%), Gaps = 18/177 (10%) Query: 29 TVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQK 86 +K Q E + K+ L ++ + I++ F + L +++ Sbjct: 887 LLKLRQACCDPRLVKLEHAKEVKSSAKLDFLMNMVSEMVEEGRRILIFSQFATMLTLIEE 946 Query: 87 AFPQ---------GRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSL 137 + G+T D+ I+ + G++P+ + G GLNL + ++ + Sbjct: 947 ELIEKGIDFVKLTGQTRDR-GAIIERFQSGEVPIFLISLKAGGVGLNLT-AADTVIHYDP 1004 Query: 138 WWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 WW+ Q +R + G + VFVY LI + T++E VL K + D + Sbjct: 1005 WWNPAVENQATDR-----AYRIGQDKPVFVYKLICEQTVEERVLALHARKQKLADSV 1056 >gi|17232392|ref|NP_488940.1| SWI/SNF family helicase [Nostoc sp. PCC 7120] gi|17134038|dbj|BAB76599.1| SWI/SNF family helicase [Nostoc sp. PCC 7120] Length = 869 Score = 141 bits (356), Expect = 5e-32, Method: Composition-based stats. Identities = 37/210 (17%), Positives = 76/210 (36%), Gaps = 25/210 (11%) Query: 4 YHKFQRELYCDLQGENIEAFN----SASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKAL 59 Y +R+ L N EA N ++ +K + + E+ K++ Sbjct: 650 YEALRRQAISKLSDSNAEAGNKHLQVLAEIMKLRRACCNPSLVMPD---TELSSSKLQLF 706 Query: 60 EVIIEKA--NAAPIIVAYHFNSDLARLQKAFPQGRT----------LDKDPCTIQEWNEG 107 ++ + N +V F L ++ + + + + + G Sbjct: 707 GEVLGELLENRHKALVFSQFVDHLHIIRNYLDKQGINYQYLDGSTSVSERKKRVDAFQAG 766 Query: 108 KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFV 167 + + G GLNL + ++ WW+ Q +R + G +R V + Sbjct: 767 NGDVFLISLKAGGTGLNLT-AADYVIHTDPWWNPAVEDQASDR-----AHRIGQQRPVTI 820 Query: 168 YYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 Y L+A++TI+E +++ K + D LL Sbjct: 821 YRLVAKDTIEEKIVELHHHKRDLADSLLEG 850 >gi|300854652|ref|YP_003779636.1| putative helicase [Clostridium ljungdahlii DSM 13528] gi|300434767|gb|ADK14534.1| predicted helicase [Clostridium ljungdahlii DSM 13528] Length = 1088 Score = 141 bits (356), Expect = 6e-32, Method: Composition-based stats. Identities = 45/203 (22%), Positives = 87/203 (42%), Gaps = 23/203 (11%) Query: 8 QRELYCDLQGENIEAFNS--ASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEK 65 + EL +++ + I S + Q+ + E E + K++AL I++ Sbjct: 873 KEELNNEIRDKGINKSKIKILSIITRLRQICCDPSTFIEN---YESDNGKMEALMGIVQN 929 Query: 66 A--NAAPIIVAYHFNSDL---------ARLQKAFPQGRTL-DKDPCTIQEWNEGKIPLLF 113 + + I++ F S L ++ + G +K ++E+NEG+IP+ Sbjct: 930 SVNDGHKILLFSQFTSVLKNIGDMFKNENIKYMYLDGSVKAEKRGEMVREFNEGQIPIFL 989 Query: 114 AHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQ 173 + G GLNL +I++ + WW+ Q +R + G K+ V V LIA+ Sbjct: 990 ISLKAGGTGLNLT-SADIVIHYDPWWNPAVENQASDR-----AHRIGQKKTVEVIRLIAK 1043 Query: 174 NTIDELVLQRLRTKSTIQDLLLN 196 TI+E + + K I + ++ Sbjct: 1044 GTIEEKIHKIQDKKKEIINNVIE 1066 >gi|303238661|ref|ZP_07325194.1| SNF2-related protein [Acetivibrio cellulolyticus CD2] gi|302593780|gb|EFL63495.1| SNF2-related protein [Acetivibrio cellulolyticus CD2] Length = 1088 Score = 141 bits (355), Expect = 6e-32, Method: Composition-based stats. Identities = 41/213 (19%), Positives = 84/213 (39%), Gaps = 27/213 (12%) Query: 2 KQYHKFQR----ELYCDLQGENIE--AFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEK 55 K Y F + E+ +++ + IE + + Q+ + E + K Sbjct: 865 KLYAAFLKQAQGEVAAEIREKGIERSKIKILALLTRLRQICCHPAMFVEN---YKGGSGK 921 Query: 56 IKALEVIIEKA--NAAPIIVAYHFNSDLARLQKAFPQ---------GRTLDKDPCT-IQE 103 + L II + + +++ F S + KA + G T K+ + Sbjct: 922 LDTLLEIIGDSIDSGHRLLLFSQFTSMHDIIGKALKESGKSYFYIDGSTKAKERIDMVNR 981 Query: 104 WNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKR 163 +N G+ L + G GLNL G ++++ + WW+ Q +R + G + Sbjct: 982 FNNGENDLFLISLKAGGTGLNLT-GADMVIHYDPWWNPAVEDQATDR-----AYRIGQTK 1035 Query: 164 AVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 AV V+ +I + TI+E + + K + + ++ Sbjct: 1036 AVQVFKIITKGTIEEKIYELQEKKRGLINNVIQ 1068 >gi|34495520|ref|NP_899735.1| SWI/SNF family helicase [Chromobacterium violaceum ATCC 12472] gi|34101375|gb|AAQ57744.1| probable SWI/SNF family helicase [Chromobacterium violaceum ATCC 12472] Length = 910 Score = 141 bits (355), Expect = 6e-32, Method: Composition-based stats. Identities = 39/211 (18%), Positives = 73/211 (34%), Gaps = 25/211 (11%) Query: 3 QYHKFQRELYCDLQGENIEA----FNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKA 58 Y ++E + + A + ++ + + + + K+ A Sbjct: 688 VYEAMRQEALARVAEADPAAGGQTMQALAELTRLRRFCCHPKLTQPD---SALPASKLAA 744 Query: 59 LEVIIEKA--NAAPIIVAYHFNSDLARLQKAFPQGRTL----------DKDPCTIQEWNE 106 I E+ N +V F LA + + Q + ++ + Sbjct: 745 FAEICEELLDNGHKALVFSQFVDHLALVAEHLRQRGVRFHYLDGGTPSRQRKASMDAFQA 804 Query: 107 GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVF 166 G L + G GLNL + ++ WW+ Q +R + G +R V Sbjct: 805 GDGDLFLISLKAGGTGLNLT-AADYVIHLDPWWNPAVEDQASDR-----AYRMGQQRPVT 858 Query: 167 VYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 VY L+A TI+E +++ R K + D LL Sbjct: 859 VYRLVAAGTIEEKIVELHRDKRALADSLLAG 889 >gi|229817614|ref|ZP_04447896.1| hypothetical protein BIFANG_02882 [Bifidobacterium angulatum DSM 20098] gi|229785403|gb|EEP21517.1| hypothetical protein BIFANG_02882 [Bifidobacterium angulatum DSM 20098] Length = 1229 Score = 141 bits (355), Expect = 6e-32, Method: Composition-based stats. Identities = 40/215 (18%), Positives = 80/215 (37%), Gaps = 30/215 (13%) Query: 2 KQYHKFQRELYCDLQGENIEAFNS-----ASKTVKCLQLANGA--VYYDEEKHWKEVHDE 54 K Y ++ L L F++ ++ ++ VY D Sbjct: 1007 KLYAAHEQRLRASLNSVEDADFDTNRIRILAELTLLREICCAPKLVYEDANG-----ASA 1061 Query: 55 KIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAF---------PQGRTLDKDPCT-IQ 102 K+ A++ ++ ++V F S L + F G T + + Sbjct: 1062 KLDAIDDLVASCMDAGKKVLVFSQFTSFLDLIGDRFTAHGVPFYTITGETPKRKRVDLVN 1121 Query: 103 EWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFK 162 ++N +P+ + GLNL G ++++ WW+ Q +R + G Sbjct: 1122 QFNMDDVPVFLISLKAGNTGLNLT-GASVVIHADPWWNAAAQSQATDR-----AHRIGQT 1175 Query: 163 RAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + V VY ++AQ+TI+E +L+ + KS + + Sbjct: 1176 QDVNVYQIVAQHTIEERILRLQKEKSALARQFTDG 1210 >gi|313623518|gb|EFR93710.1| SNF2 family helicase [Listeria innocua FSL J1-023] Length = 650 Score = 141 bits (355), Expect = 6e-32, Method: Composition-based stats. Identities = 45/210 (21%), Positives = 83/210 (39%), Gaps = 25/210 (11%) Query: 3 QYHKFQRELYCDLQGENIEAFNS----ASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKA 58 Y + ++ DL+ N A + + Q+ + E + K+ Sbjct: 423 IYLAYLEKIQADLEESNGNASEERIKLLAGLTRLRQICCDPSLFVEN---YQGESGKLLQ 479 Query: 59 LEVIIEKA--NAAPIIVAYHFNSDLARLQKAFPQ---------GRTLDKDPCT-IQEWNE 106 L I+ A N I++ F LA +++ + G+T K + +NE Sbjct: 480 LFDTIQTARENGKRILIFSQFTGMLAIIRRKLEEDGQSLFYMDGKTPAKTRLDMVNAFNE 539 Query: 107 GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVF 166 G+ + + G GLNL G + ++ + LWW+ +Q R + G KR V Sbjct: 540 GENDIFLISLKAGGTGLNL-VGADTVILYDLWWNPAVEEQATGR-----AHRIGQKRVVQ 593 Query: 167 VYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 V+ +I + TI+E + + K + D L+ Sbjct: 594 VFRMITKGTIEERIFDLQKKKQALVDELIQ 623 >gi|326779993|ref|ZP_08239258.1| SNF2-related protein [Streptomyces cf. griseus XylebKG-1] gi|326660326|gb|EGE45172.1| SNF2-related protein [Streptomyces cf. griseus XylebKG-1] Length = 1001 Score = 141 bits (355), Expect = 6e-32, Method: Composition-based stats. Identities = 36/208 (17%), Positives = 76/208 (36%), Gaps = 21/208 (10%) Query: 3 QYHKFQRELYCDLQGENIEAFNSAS--KTVKCLQLANG-AVYYDEEKHWKEVHDEKIKAL 59 Y RE ++ A Q+ N A Y EE K+ L Sbjct: 775 LYEAAVRETMAQIEAAEGIARRGLVMKLLTSLKQICNHPAQYLKEEPTRLTGRSGKLALL 834 Query: 60 EVIIEK--ANAAPIIVAYHFNSDLARLQKAFP----------QGRTLDKDPCTIQEWNEG 107 + +++ + +++ + + L G + + + + Sbjct: 835 DELLDTILSEDGSVLIFTQYVTMAKLLSAHLASRAIPSQLLHGGTPVAERERMVDRFQSA 894 Query: 108 KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFV 167 ++P+ + G GLNL + +V F WW+ +Q +R + G + V V Sbjct: 895 EVPVFLLSLKAAGTGLNLTRAAH-VVHFDRWWNPAVEEQATDR-----AYRIGQTQPVQV 948 Query: 168 YYLIAQNTIDELVLQRLRTKSTIQDLLL 195 + +IA+ T+++ + + L +K + D +L Sbjct: 949 HRIIAEGTVEDRIAELLESKRVLADAVL 976 >gi|182439336|ref|YP_001827055.1| SNF2/RAD54 family helicase [Streptomyces griseus subsp. griseus NBRC 13350] gi|178467852|dbj|BAG22372.1| putative SNF2/RAD54 family helicase [Streptomyces griseus subsp. griseus NBRC 13350] Length = 1004 Score = 141 bits (355), Expect = 6e-32, Method: Composition-based stats. Identities = 36/208 (17%), Positives = 76/208 (36%), Gaps = 21/208 (10%) Query: 3 QYHKFQRELYCDLQGENIEAFNSAS--KTVKCLQLANG-AVYYDEEKHWKEVHDEKIKAL 59 Y RE ++ A Q+ N A Y EE K+ L Sbjct: 778 LYEAAVRETMAQIEAAEGIARRGLVMKLLTSLKQICNHPAQYLKEEPTRLTGRSGKLALL 837 Query: 60 EVIIEK--ANAAPIIVAYHFNSDLARLQKAFP----------QGRTLDKDPCTIQEWNEG 107 + +++ + +++ + + L G + + + + Sbjct: 838 DELLDTILSEDGSVLIFTQYVTMAKLLSAHLASRAIPSQLLHGGTPVAERERMVDRFQSA 897 Query: 108 KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFV 167 ++P+ + G GLNL + +V F WW+ +Q +R + G + V V Sbjct: 898 EVPVFLLSLKAAGTGLNLTRAAH-VVHFDRWWNPAVEEQATDR-----AYRIGQTQPVQV 951 Query: 168 YYLIAQNTIDELVLQRLRTKSTIQDLLL 195 + +IA+ T+++ + + L +K + D +L Sbjct: 952 HRIIAEGTVEDRIAELLESKRVLADAVL 979 >gi|317473515|ref|ZP_07932807.1| SNF2 family domain-containing protein [Anaerostipes sp. 3_2_56FAA] gi|316899026|gb|EFV21048.1| SNF2 family domain-containing protein [Anaerostipes sp. 3_2_56FAA] Length = 1116 Score = 141 bits (355), Expect = 6e-32, Method: Composition-based stats. Identities = 40/213 (18%), Positives = 80/213 (37%), Gaps = 26/213 (12%) Query: 2 KQYHKFQRELYCDLQGENIE-----AFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKI 56 K Y + + L ++ E S+ + QL ++ K V K Sbjct: 895 KLYDAHVKRMQLMLDKQSEEEFKSSKIQILSELTRLRQLCCSPELVFDQYTGKSV---KS 951 Query: 57 KALEVIIEKA--NAAPIIVAYHFNSDLARLQKAFPQGRT----------LDKDPCTIQEW 104 +I+ A I++ F S ++ L++ + +K ++++ Sbjct: 952 DLCIDLIKNAVSGGHKILLFSQFTSMISILEERLQAEKISFYTLIGSVNKEKRARMVEDF 1011 Query: 105 NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA 164 N + + G GLNL +I++ + WW+L Q +R + G + Sbjct: 1012 NNDDTSVFCISLKAGGTGLNLT-SADIVIHYDPWWNLAVQNQATDR-----AHRIGQENV 1065 Query: 165 VFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 V VY LI + TI++ +++ K + D +L Sbjct: 1066 VMVYRLIVEGTIEDNIVKLQEKKKELADQILGG 1098 >gi|315499178|ref|YP_004087982.1| snf2-related protein [Asticcacaulis excentricus CB 48] gi|315417190|gb|ADU13831.1| SNF2-related protein [Asticcacaulis excentricus CB 48] Length = 1107 Score = 141 bits (355), Expect = 6e-32, Method: Composition-based stats. Identities = 33/179 (18%), Positives = 67/179 (37%), Gaps = 19/179 (10%) Query: 29 TVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQK 86 +K Q+ + ++ K+ L ++ +I+ F S L + Sbjct: 918 LLKLRQVCCDPSLLKIDGT-EDAPSAKLDRLMEMVTALAEEGRRLIIFSQFTSMLDLIAA 976 Query: 87 AFPQ---------GRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSL 137 + G+T ++ + + G P+ + G GLNL + ++ + Sbjct: 977 RLDKAGLGYGILTGKTQNR-KKEVDAFQSGDNPIFLISLKAGGTGLNLT-SADTVILYDP 1034 Query: 138 WWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 WW+ Q I+R + G + VFVY L A+ TI++ + + K + L + Sbjct: 1035 WWNPAVEAQAIDR-----AYRIGQDKPVFVYRLCAEGTIEDKMDEMKARKQALSHALFD 1088 >gi|158320075|ref|YP_001512582.1| non-specific serine/threonine protein kinase [Alkaliphilus oremlandii OhILAs] gi|158140274|gb|ABW18586.1| Non-specific serine/threonine protein kinase [Alkaliphilus oremlandii OhILAs] Length = 1085 Score = 141 bits (355), Expect = 7e-32, Method: Composition-based stats. Identities = 40/212 (18%), Positives = 82/212 (38%), Gaps = 27/212 (12%) Query: 2 KQYHKFQRELYCDLQGE------NIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEK 55 K Y + +E+ L+ E + + Q+ + E K Sbjct: 861 KIYVGYLKEIQGSLEEEIREYGFERSQIKILAALTRLRQICCHPAMFIENYT---GTSGK 917 Query: 56 IKALEVIIEKA--NAAPIIVAYHFNSDLARLQKAFP----------QGRTLDKDPCTIQE 103 + L+ IIE A I++ F S L+ +++ +++ + + Sbjct: 918 FELLQEIIENAIEGKHRILLFSQFTSMLSIIREMLESLNISYYYLDGSTPMEERGKLVSD 977 Query: 104 WNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKR 163 +N+G + + G GLNL G ++++ F WW+ +Q +R + G + Sbjct: 978 FNKGNSDVFLISLKAGGTGLNLT-GADMVIHFDPWWNPAVEEQATDR-----AYRIGQQN 1031 Query: 164 AVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 +V V LI + TI+E + + K + D ++ Sbjct: 1032 SVHVMKLITKGTIEEKIAKLQERKRELIDAVI 1063 >gi|119943907|ref|YP_941587.1| SNF2-related protein [Psychromonas ingrahamii 37] gi|119862511|gb|ABM01988.1| SNF2-related protein [Psychromonas ingrahamii 37] Length = 1080 Score = 141 bits (355), Expect = 7e-32, Method: Composition-based stats. Identities = 37/179 (20%), Positives = 69/179 (38%), Gaps = 22/179 (12%) Query: 29 TVKCLQLANGAVYYDEEKHWKEVHDEKIK----ALEVIIEKANAAPIIVAYHFNSDLARL 84 +K Q E K+ L +IE+ I++ F L + Sbjct: 887 LLKLRQACCDPRLVKLEHAKNIKSSAKLDYLMGVLPEMIEE--GRRILIFSQFAQMLGLI 944 Query: 85 QKAFP---------QGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFF 135 +++ G+T ++ I ++ G +P+ + G GLNL + ++ + Sbjct: 945 EQSLLASDIDFVKLTGQTRNRSE-VIDKFQNGNVPIFLISLKAGGVGLNLT-AADTVIHY 1002 Query: 136 SLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 WW+ Q +R + G + VFVY LI ++T++E VL K + D + Sbjct: 1003 DPWWNPAVENQATDR-----AYRIGQDKPVFVYKLICEHTVEERVLALQTRKQKLADSV 1056 >gi|70729334|ref|YP_259071.1| helicase/SNF2 domain-containing protein [Pseudomonas fluorescens Pf-5] gi|68343633|gb|AAY91239.1| helicase/SNF2 family domain protein [Pseudomonas fluorescens Pf-5] Length = 875 Score = 141 bits (355), Expect = 7e-32, Method: Composition-based stats. Identities = 38/183 (20%), Positives = 79/183 (43%), Gaps = 18/183 (9%) Query: 29 TVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQ- 85 +K Q+ ++ + K+ +L ++E+ I++ F S L+ ++ Sbjct: 676 LLKLRQVCCDLRLVNDSPPTRGSSSGKLDSLMEMLEELFEEGRRILLFSQFTSMLSLIEA 735 Query: 86 --------KAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSL 137 A G+T D+ ++++ GK+ + + G GLNL + ++ + Sbjct: 736 ELKRRNIAYALLTGQTRDRR-TPVRDFQSGKLQIFLISLKAGGVGLNLTE-ADTVIHYDP 793 Query: 138 WWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 WW+ Q +R + G ++ VFVY LIA+ T++E + + KS + +L+ Sbjct: 794 WWNPATESQATDR-----AYRIGQEKPVFVYKLIARGTVEEKIQHLQQEKSDLAAGVLDG 848 Query: 198 LKK 200 K Sbjct: 849 RKA 851 >gi|283795073|ref|ZP_06344226.1| Snf2 family protein [Clostridium sp. M62/1] gi|291077403|gb|EFE14767.1| Snf2 family protein [Clostridium sp. M62/1] Length = 254 Score = 141 bits (355), Expect = 8e-32, Method: Composition-based stats. Identities = 41/209 (19%), Positives = 84/209 (40%), Gaps = 24/209 (11%) Query: 1 MKQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 ++ +++ +LQ + ++ + Q+ E K++ Sbjct: 39 VRLMESLEKQSDEELQKGKL---QILAELTRLRQICCAPEMLYEN---YSETSCKVETCM 92 Query: 61 VIIEKA--NAAPIIVAYHFNSDLARLQKAFPQGRT----------LDKDPCTIQEWNEGK 108 +I +A I++ F S L+K Q + + +++N G Sbjct: 93 ELIHQAMSGNHKILLFSQFTSVFPILEKRLLQEKIPYYELTGQTSKENRMRMTEQFNSGD 152 Query: 109 IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVY 168 +P+ + G GLNL +I++ F WW+L Q +R + G ++ V V+ Sbjct: 153 VPVFLISLKAGGTGLNLT-AASIVIHFDPWWNLAAQNQATDR-----AHRIGQEKQVTVF 206 Query: 169 YLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 LIAQNTI+E +++ + K + +L+ Sbjct: 207 KLIAQNTIEEKIIKLQQEKQKLSSQILDG 235 >gi|292900753|ref|YP_003540122.1| helicase [Erwinia amylovora ATCC 49946] gi|291200601|emb|CBJ47732.1| putative helicase [Erwinia amylovora ATCC 49946] Length = 852 Score = 140 bits (354), Expect = 8e-32, Method: Composition-based stats. Identities = 37/175 (21%), Positives = 74/175 (42%), Gaps = 18/175 (10%) Query: 33 LQLANGAVYYDEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQ 90 Q+ + + K H K+ L ++ A I++ F + L + + Sbjct: 665 RQICCDPRLLADARAEKVRHSAKLALLREMLHDLLAEDRRILIFSQFTTMLTIIAGELHK 724 Query: 91 GR---------TLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDL 141 R T D++ ++ + +G++P+ + G GLNL + ++ + WW+ Sbjct: 725 ARIPFVTLTGATRDRNE-PVRSFQQGEVPVFLISLKAGGVGLNLT-AADTVIHYDPWWNP 782 Query: 142 EEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 Q +R + G + VFVY LIA TI+E ++ + K+ + + +LN Sbjct: 783 AAENQATDRAW-----RLGQDKPVFVYKLIAAGTIEEKIVALQQQKADLAEEILN 832 >gi|292486850|ref|YP_003529720.1| SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 [Erwinia amylovora CFBP1430] gi|291552267|emb|CBA19304.1| SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 [Erwinia amylovora CFBP1430] Length = 852 Score = 140 bits (354), Expect = 8e-32, Method: Composition-based stats. Identities = 37/175 (21%), Positives = 74/175 (42%), Gaps = 18/175 (10%) Query: 33 LQLANGAVYYDEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQ 90 Q+ + + K H K+ L ++ A I++ F + L + + Sbjct: 665 RQICCDPRLLADARAEKVRHSAKLALLREMLHDLLAEDRRILIFSQFTTMLTIIAGELHK 724 Query: 91 GR---------TLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDL 141 R T D++ ++ + +G++P+ + G GLNL + ++ + WW+ Sbjct: 725 ARIPFVTLTGATRDRNE-PVRSFQQGEVPVFLISLKAGGVGLNLT-AADTVIHYDPWWNP 782 Query: 142 EEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 Q +R + G + VFVY LIA TI+E ++ + K+ + + +LN Sbjct: 783 AAENQATDRAW-----RLGQDKPVFVYKLIAAGTIEEKIVALQQQKADLAEEILN 832 >gi|237747228|ref|ZP_04577708.1| helicase [Oxalobacter formigenes HOxBLS] gi|229378579|gb|EEO28670.1| helicase [Oxalobacter formigenes HOxBLS] Length = 1126 Score = 140 bits (354), Expect = 8e-32, Method: Composition-based stats. Identities = 35/147 (23%), Positives = 69/147 (46%), Gaps = 16/147 (10%) Query: 68 AAPIIVAYHFNSDLA---------RLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPAS 118 I+V F S L+ R+ A G T D+ I+ + +GK+P+ + Sbjct: 967 KRHILVFSQFTSMLSLIEKELNSRRIPYALLTGDTADRASA-IRHFQDGKVPVFLISLKA 1025 Query: 119 CGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDE 178 G GLNL + ++ + WW+ Q +R + G + VFVY LIA+ T++E Sbjct: 1026 GGVGLNLT-AADTVIHYDPWWNPAVENQATDRAW-----RIGQDKPVFVYKLIAKGTLEE 1079 Query: 179 LVLQRLRTKSTIQDLLLNALKKETIHV 205 + + + K+ + + +L++ + + + + Sbjct: 1080 QIQELQQRKADLANAMLSSGQAQHVQI 1106 >gi|313637601|gb|EFS03000.1| DNA/RNA helicase protein [Listeria seeligeri FSL S4-171] Length = 512 Score = 140 bits (354), Expect = 8e-32, Method: Composition-based stats. Identities = 43/208 (20%), Positives = 82/208 (39%), Gaps = 21/208 (10%) Query: 1 MKQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 + K Q +L + E + + Q+ + E + K+ L Sbjct: 288 LAYLEKIQADLAESNGNASEERIKLLAGLTRLRQICCDPSLFVEN---YQGESGKLLQLF 344 Query: 61 VIIEKA--NAAPIIVAYHFNSDLARLQKAFPQ---------GRTLDKDPCT-IQEWNEGK 108 I+ A N +++ F LA +++ + G+T K + +NEG+ Sbjct: 345 DTIQTARENGKRLLIFSQFTGMLAIIRRKLEEDGQTFFYMDGKTPAKTRLDMVNSFNEGE 404 Query: 109 IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVY 168 + + G GLNL G + ++ + LWW+ +Q R + G KR V V+ Sbjct: 405 NDIFLISLKAGGTGLNL-VGADTVILYDLWWNPAVEEQATGR-----AHRIGQKRVVQVF 458 Query: 169 YLIAQNTIDELVLQRLRTKSTIQDLLLN 196 +I + TI+E + + + K + D L+ Sbjct: 459 RMITKGTIEERIFELQKKKQALVDELIQ 486 >gi|315303447|ref|ZP_07874044.1| DNA/RNA helicase protein [Listeria ivanovii FSL F6-596] gi|313628192|gb|EFR96728.1| DNA/RNA helicase protein [Listeria ivanovii FSL F6-596] Length = 1072 Score = 140 bits (354), Expect = 8e-32, Method: Composition-based stats. Identities = 43/208 (20%), Positives = 81/208 (38%), Gaps = 21/208 (10%) Query: 1 MKQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 + K Q +L + E + + Q+ + E + K+ L Sbjct: 847 LAYLEKIQADLEESSGNASEERIKLLAGLTRLRQICCDPSLFVEN---YQGESGKLLQLF 903 Query: 61 VIIEKA--NAAPIIVAYHFNSDLARLQKAFPQ---------GRTLDKDPCT-IQEWNEGK 108 I+ A N I++ F LA +++ + G+T + + +NEG+ Sbjct: 904 DTIQTARENGKRILIFSQFTGMLAIIRRKLEEDGQTFFYMDGKTPSRTRLDMVNSFNEGE 963 Query: 109 IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVY 168 + + G GLNL G + ++ + LWW+ +Q R + G KR V V+ Sbjct: 964 NDIFLISLKAGGTGLNL-VGADTVILYDLWWNPAVEEQATGR-----AHRIGQKRVVQVF 1017 Query: 169 YLIAQNTIDELVLQRLRTKSTIQDLLLN 196 +I + TI+E + + K + D L+ Sbjct: 1018 RMITKGTIEERIFDLQKKKQALVDELIQ 1045 >gi|325277313|ref|ZP_08142939.1| non-specific serine/threonine protein kinase [Pseudomonas sp. TJI-51] gi|324097548|gb|EGB95768.1| non-specific serine/threonine protein kinase [Pseudomonas sp. TJI-51] Length = 1105 Score = 140 bits (354), Expect = 9e-32, Method: Composition-based stats. Identities = 33/183 (18%), Positives = 74/183 (40%), Gaps = 17/183 (9%) Query: 29 TVKCLQLANGA-VYYDEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQ 85 +K Q+ + E + K+ AL ++++ + +++ F S LA ++ Sbjct: 906 LLKLRQVCCDLRLVKGVESKGNQADKGKLGALLQMLDELLSEGRRVLLFSQFTSMLALIE 965 Query: 86 KAFPQGRTL--------DKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSL 137 + + + +Q++ +G + + G GLNL + ++ F Sbjct: 966 QELQKRQIRYSLLTGDTRDRRTPVQQFQQGDSEVFLISLKAGGVGLNLT-AADTVIHFDP 1024 Query: 138 WWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 WW+ Q +R + G + VFV+ LI + T++E + + K+ + LL+ Sbjct: 1025 WWNPASENQATDR-----AYRIGQDKPVFVFKLITRGTVEEKIQALQQEKAALAASLLDG 1079 Query: 198 LKK 200 + Sbjct: 1080 GQA 1082 >gi|312170918|emb|CBX79177.1| SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 [Erwinia amylovora ATCC BAA-2158] Length = 852 Score = 140 bits (354), Expect = 9e-32, Method: Composition-based stats. Identities = 37/175 (21%), Positives = 74/175 (42%), Gaps = 18/175 (10%) Query: 33 LQLANGAVYYDEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQ 90 Q+ + + K H K+ L ++ A I++ F + L + + Sbjct: 665 RQICCDPRLLADARAEKVRHSAKLALLREMLHDLLAEDRRILIFSQFTTMLTIIAGELHK 724 Query: 91 GR---------TLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDL 141 R T D++ ++ + +G++P+ + G GLNL + ++ + WW+ Sbjct: 725 ARIPFVTLTGATRDRNE-PVRSFQQGEVPVFLISLKAGGVGLNLT-AADTVIHYDPWWNP 782 Query: 142 EEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 Q +R + G + VFVY LIA TI+E ++ + K+ + + +LN Sbjct: 783 AAENQATDRAW-----RLGQDKPVFVYKLIAAGTIEEKIVALQQQKADLAEEILN 832 >gi|308446187|ref|XP_003087115.1| hypothetical protein CRE_23866 [Caenorhabditis remanei] gi|308262104|gb|EFP06057.1| hypothetical protein CRE_23866 [Caenorhabditis remanei] Length = 437 Score = 140 bits (354), Expect = 9e-32, Method: Composition-based stats. Identities = 37/183 (20%), Positives = 73/183 (39%), Gaps = 19/183 (10%) Query: 26 ASKTVKCLQLANGAVYYD-EEKHWKEVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLA 82 S +K Q+ ++ + V K+ L +++ I++ F + L Sbjct: 243 LSALLKLRQVCCHPSLLQLDQVKNQNVESAKLDHLLEMVQDMVEEGRKILIFSQFTTMLQ 302 Query: 83 RLQKAFPQ---------GRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILV 133 +++ G+T +D I + G IP+ + G GLNL + ++ Sbjct: 303 LIEEHLKTLNIRNVKLTGQTKKRDE-VITAFQAGDIPVFLISLKAGGVGLNLT-AADTVI 360 Query: 134 FFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDL 193 + WW+ Q +R + G + VFVY LI +I+E +L + K+ + Sbjct: 361 HYDPWWNPAAEDQASDRAW-----RIGQDKPVFVYKLITNQSIEEKILALQKNKADLAKS 415 Query: 194 LLN 196 +L+ Sbjct: 416 ILS 418 >gi|262374572|ref|ZP_06067846.1| predicted protein [Acinetobacter junii SH205] gi|262310568|gb|EEY91658.1| predicted protein [Acinetobacter junii SH205] Length = 1115 Score = 140 bits (354), Expect = 9e-32, Method: Composition-based stats. Identities = 40/213 (18%), Positives = 80/213 (37%), Gaps = 25/213 (11%) Query: 2 KQYHKFQRELYCDLQGENIEA------FNSASKTVKCLQLANGAVYYD-EEKHWKEVHDE 54 K Y + + ++Q E +K Q+ + + H Sbjct: 889 KLYEAVRATMQENIQKIVAEKGFKRSQIQILDALLKLRQVCCHPSLLKLDSVKTGQAHSA 948 Query: 55 KIKALEVIIEKA--NAAPIIVAYHFNSDLARLQKAF---------PQGRTLDKDPCTIQE 103 K++ L ++ I++ F S L +++ G+T +D I Sbjct: 949 KLEQLMDMVVPMVEEGRKILIFSQFTSMLELIEQQLHHAEIGYVKLTGKTKKRDE-VITA 1007 Query: 104 WNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKR 163 + G++P+ + G GLNL + ++ + WW+ Q +R + G + Sbjct: 1008 FQSGQVPVFLISLKAGGVGLNLT-AADTVIHYDPWWNPAAEDQASDRAW-----RIGQDK 1061 Query: 164 AVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 VFVY LI +I+E +L + K+ + +L+ Sbjct: 1062 PVFVYKLITNKSIEEKILALQQNKAELAQSILS 1094 >gi|320011393|gb|ADW06243.1| SNF2-related protein [Streptomyces flavogriseus ATCC 33331] Length = 964 Score = 140 bits (354), Expect = 9e-32, Method: Composition-based stats. Identities = 37/213 (17%), Positives = 80/213 (37%), Gaps = 21/213 (9%) Query: 3 QYHKFQRELYCDLQGENIEAFNSA--SKTVKCLQLANG-AVYYDEEKHWKEVHDEKIKAL 59 Y RE ++ A Q+ N A Y EE K+ L Sbjct: 738 LYEAAVRETMAFIEQSEGIARRGLIMKLLGSLKQICNHPAQYLKEEPTRLTGRSGKLALL 797 Query: 60 EVIIEK--ANAAPIIVAYHFNSDLARLQKAFP----------QGRTLDKDPCTIQEWNEG 107 + +++ + +++ + S L G + + + + G Sbjct: 798 DELLDTILSEDGSVLIFTQYVSMARLLSAHLASRSIPSQLLHGGTPVPERERMVDGFQSG 857 Query: 108 KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFV 167 ++P+ + G GLNL + ++ + WW+ +Q +R + G + V V Sbjct: 858 EVPVFLLSLKAAGTGLNLTRAAH-VIHYDRWWNPAVEEQATDR-----AYRIGQTQPVQV 911 Query: 168 YYLIAQNTIDELVLQRLRTKSTIQDLLLNALKK 200 + LIA+ T+++ + + L++K + D +L + + Sbjct: 912 HRLIAEGTVEDRISELLQSKRALADAVLGSGEA 944 >gi|23100530|ref|NP_693997.1| helicase [Oceanobacillus iheyensis HTE831] gi|22778763|dbj|BAC15031.1| helicase (swi/snf family) [Oceanobacillus iheyensis HTE831] Length = 1056 Score = 140 bits (354), Expect = 9e-32, Method: Composition-based stats. Identities = 38/183 (20%), Positives = 72/183 (39%), Gaps = 21/183 (11%) Query: 26 ASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLAR 83 + + Q+ + E E K++ L I+ A N +++ F S Sbjct: 863 LAGLTRLRQICCHPSMFIEN---YEGASGKLEQLMETIKTALDNGKRMLIFSQFTSMHEI 919 Query: 84 LQKAFPQ---------GRTLDKDP-CTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILV 133 +Q+ + G+T K+ + +N G+ + + G GLNL G + ++ Sbjct: 920 IQERLKKEGYGYFYLHGQTSSKERVEMSERFNHGENDIFLISLKAGGTGLNLT-GADTVI 978 Query: 134 FFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDL 193 F LWW+ Q R + G K+ V V L+ + TI+E + + K + D Sbjct: 979 LFDLWWNPAVEDQATGR-----AHRFGQKKVVQVIRLVTEGTIEEKIYDLQQRKRELIDQ 1033 Query: 194 LLN 196 ++ Sbjct: 1034 VIQ 1036 >gi|330504452|ref|YP_004381321.1| non-specific serine/threonine protein kinase [Pseudomonas mendocina NK-01] gi|328918738|gb|AEB59569.1| non-specific serine/threonine protein kinase [Pseudomonas mendocina NK-01] Length = 876 Score = 140 bits (354), Expect = 1e-31, Method: Composition-based stats. Identities = 34/181 (18%), Positives = 74/181 (40%), Gaps = 19/181 (10%) Query: 29 TVKCLQLANGA-VYYDEEKHWKEVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQ 85 ++ Q + ++ K+ AL ++++ +++ F S LA ++ Sbjct: 682 LLRLRQSCCDLRLLGEDGGQLTAADSGKLSALLDMLQELVDEGRRVLLFSQFTSMLALIE 741 Query: 86 KAF---------PQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFS 136 G T D+ ++ + G+ P+ + G GLNL + ++ F Sbjct: 742 AELQARKIAYAKLTGSTQDRR-TPVERFQAGEFPVFLISLKAGGSGLNLT-AADTVIHFD 799 Query: 137 LWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 WW+ Q +R + G + VFVY LIA+ +++E + + K+++ +L+ Sbjct: 800 PWWNPAAEAQASDR-----AYRIGQDKPVFVYKLIARGSVEEKIQLLQQAKASLARGVLD 854 Query: 197 A 197 Sbjct: 855 G 855 >gi|312794614|ref|YP_004027537.1| SNF2-like protein [Caldicellulosiruptor kristjanssonii 177R1B] gi|312181754|gb|ADQ41924.1| SNF2-related protein [Caldicellulosiruptor kristjanssonii 177R1B] Length = 1108 Score = 140 bits (354), Expect = 1e-31, Method: Composition-based stats. Identities = 41/211 (19%), Positives = 85/211 (40%), Gaps = 23/211 (10%) Query: 1 MKQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 +K + E+ + +G S + Q+ + E E K++ E Sbjct: 892 LKAREDIKNEI--EQKGFEKSKIKIFSILTRLRQICCHPKLFLEN---YEGSSGKLELFE 946 Query: 61 VIIEK--ANAAPIIVAYHFNSDLARLQKAFPQ---------GRTLDKDPCTIQE-WNEGK 108 I+E + IV + L L++ G T ++ + +N G+ Sbjct: 947 EILEDVLESGHRAIVFSQWTEMLRILEERIKDRGFEYFYLDGSTKSEERIDMANSFNSGQ 1006 Query: 109 IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVY 168 + + G GLNL G ++++ + LWW+ Q ++R + G + +V V+ Sbjct: 1007 KQVFLISLKAGGFGLNLT-GADVVILYDLWWNPAVENQAMDR-----AHRIGQENSVQVF 1060 Query: 169 YLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 LI +NTI+E + + + K + D ++ + + Sbjct: 1061 RLITKNTIEERIFELQQKKKDLFDSIVQSAQ 1091 >gi|222528088|ref|YP_002571970.1| non-specific serine/threonine protein kinase [Caldicellulosiruptor bescii DSM 6725] gi|222454935|gb|ACM59197.1| Non-specific serine/threonine protein kinase [Caldicellulosiruptor bescii DSM 6725] Length = 1112 Score = 140 bits (353), Expect = 1e-31, Method: Composition-based stats. Identities = 42/211 (19%), Positives = 91/211 (43%), Gaps = 23/211 (10%) Query: 1 MKQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 +K ++E+ DL+G S + Q+ + + E KI+ E Sbjct: 896 LKAREDIKKEI--DLKGFEKSKIKIFSIFTRLRQICCHPKLFLQN---YEGSSGKIELFE 950 Query: 61 VIIEK--ANAAPIIVAYHFNSDLARLQKAFPQ---------GRTLDKDPCT-IQEWNEGK 108 I+E + ++V + L L++ + G T ++ + ++N G+ Sbjct: 951 EILEDVIESGHRVVVFSQWVEMLKILEERIKEKGFEYFYLDGSTKSEERIDMVNKFNSGQ 1010 Query: 109 IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVY 168 + + G GLNL G ++++ + LWW+ Q ++R + G + +V V+ Sbjct: 1011 KQVFLVSLKAGGFGLNLT-GADVVILYDLWWNPAVENQAMDR-----AHRIGQENSVQVF 1064 Query: 169 YLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 LI +NTI+E + + + K + D ++++ + Sbjct: 1065 RLITRNTIEERIFELQQKKKDLFDSIVSSAQ 1095 >gi|158334343|ref|YP_001515515.1| SNF2 family helicase putative [Acaryochloris marina MBIC11017] gi|158304584|gb|ABW26201.1| helicase, SNF2 family, putative [Acaryochloris marina MBIC11017] Length = 1407 Score = 140 bits (353), Expect = 1e-31, Method: Composition-based stats. Identities = 45/215 (20%), Positives = 82/215 (38%), Gaps = 25/215 (11%) Query: 1 MKQYHKFQRELYCDLQGENIEA----FNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKI 56 M Y +R+ +L + +A ++ +K + A E K+ Sbjct: 1185 MALYEALRRQAIANLADSDAQAGAKHLQVLAEIMKLRRTCCNAQLVMPESPP---ASAKL 1241 Query: 57 KALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQ---------GRTLDKDPCT-IQEW 104 + ++E+ AN +V F L LQ + G T K ++ + Sbjct: 1242 QLFGEVLEELLANHHKALVFSQFVDHLKILQDYLEKKQIAYQYLDGSTPAKIRQLRVKAF 1301 Query: 105 NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA 164 G+ + + G GLNL + ++ WW+ Q +R + G +R Sbjct: 1302 QSGEGEVFLISLKAGGTGLNLT-AADYVIHMDPWWNPAVEDQASDR-----AHRIGQRRP 1355 Query: 165 VFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 V +Y L+A+NTI+E ++ R K + D LL + Sbjct: 1356 VTIYRLVAKNTIEEKIVDLHRHKRDLADSLLEGTE 1390 >gi|315282593|ref|ZP_07870972.1| SNF2 family helicase [Listeria marthii FSL S4-120] gi|313613760|gb|EFR87525.1| SNF2 family helicase [Listeria marthii FSL S4-120] Length = 1072 Score = 140 bits (353), Expect = 1e-31, Method: Composition-based stats. Identities = 43/208 (20%), Positives = 80/208 (38%), Gaps = 21/208 (10%) Query: 1 MKQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 + K Q +L E + + Q+ + E + K+ L Sbjct: 847 LAYLEKIQADLEASNGNAGEERIKLLAGLTRLRQICCDPSLFVEN---YQGESGKLLQLF 903 Query: 61 VIIEKA--NAAPIIVAYHFNSDLARLQKAFPQ---------GRTLDKDPCT-IQEWNEGK 108 I+ A N I++ F L+ +++ + G+T K + +NEG+ Sbjct: 904 DTIQTARENGKRILIFSQFTGMLSIIRQKLEEDGQTLFYMDGKTPSKTRLDMVNAFNEGE 963 Query: 109 IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVY 168 + + G GLNL G + ++ + LWW+ +Q R + G KR V V+ Sbjct: 964 NDIFLISLKAGGTGLNL-VGADTVILYDLWWNPAVEEQATGR-----AHRIGQKRVVQVF 1017 Query: 169 YLIAQNTIDELVLQRLRTKSTIQDLLLN 196 +I + TI+E + + K + D L+ Sbjct: 1018 RMITKGTIEERIFDLQKKKQALVDELIQ 1045 >gi|284031541|ref|YP_003381472.1| SNF2-like protein [Kribbella flavida DSM 17836] gi|283810834|gb|ADB32673.1| SNF2-related protein [Kribbella flavida DSM 17836] Length = 961 Score = 140 bits (353), Expect = 1e-31, Method: Composition-based stats. Identities = 43/214 (20%), Positives = 79/214 (36%), Gaps = 22/214 (10%) Query: 3 QYHKFQRELYCDLQGENIEAFNSA--SKTVKCLQLANGAVYY--DEEKHWKEVHDEKIKA 58 Y REL ++ + A Q+ N V Y + K++ Sbjct: 733 LYEATVRELMDAVRASDAMARRGLIVKLLTGLKQICNHPVQYLKEPAGAKLTGRSGKLEL 792 Query: 59 LEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQ----------GRTLDKDPCTIQEWNE 106 L+ ++ A ++V + L++ G + K ++ + Sbjct: 793 LDELLGTILAEDGAVLVFTQYVEMARLLERHLADRGVPTQLLHGGTPVRKREEMVERFQA 852 Query: 107 GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVF 166 G+IP+ + G GLNL + +V + WW+ Q +R + G R V Sbjct: 853 GEIPVFLLSLKAAGTGLNLTR-ADHVVHYDRWWNPAVEDQATDR-----AYRIGQIRPVQ 906 Query: 167 VYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKK 200 V+ LIA+ TI++ + L K + D +L A + Sbjct: 907 VHRLIAEGTIEDRIAAMLAGKRALADSVLTAGEA 940 >gi|297155115|gb|ADI04827.1| SNF2/RAD54 family helicase [Streptomyces bingchenggensis BCW-1] Length = 1008 Score = 140 bits (353), Expect = 1e-31, Method: Composition-based stats. Identities = 44/214 (20%), Positives = 86/214 (40%), Gaps = 23/214 (10%) Query: 3 QYHKFQRELYCDLQGENIEAFNSA--SKTVKCLQLANG-AVYYDEEKHWKEVHDEKIKAL 59 Y RE+ ++ G + A Q+ N A Y E++ K++ L Sbjct: 781 LYEAVVREMLAEISGADGLARRGLIVKLLTGLKQICNHPAQYLKEDRPVIAGRSGKLELL 840 Query: 60 EVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTLD-----------KDPCTIQEWNE 106 + +++ A A ++V + AR+ + R + + + + E Sbjct: 841 DELLDTILAEDASVLVFTQYVQM-ARILQDHLAARGIGAQLLHGGTPVARRQELVDRFQE 899 Query: 107 GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVF 166 G++P+ + G GLNL G+ +V + WW+ Q +R + G + V Sbjct: 900 GEVPVFLLSLKAAGTGLNLTRAGH-VVHYDRWWNPAVEAQATDR-----AYRIGQTQPVQ 953 Query: 167 VYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKK 200 V+ LIA+ T+++ + L K + D +L A + Sbjct: 954 VHRLIAEGTVEDRIAAILERKRELADAVLGAGEA 987 >gi|295835221|ref|ZP_06822154.1| SNF2/helicase domain-containing protein [Streptomyces sp. SPB74] gi|295825374|gb|EDY45121.2| SNF2/helicase domain-containing protein [Streptomyces sp. SPB74] Length = 923 Score = 140 bits (353), Expect = 1e-31, Method: Composition-based stats. Identities = 38/216 (17%), Positives = 87/216 (40%), Gaps = 25/216 (11%) Query: 3 QYHKFQRELYCDLQGENIEAFNSASK--TVKCLQLANG---AVYYDEEKHWKEVHDEKIK 57 Y + R +++ + A + Q+ N + E + + K+ Sbjct: 695 LYEEQVRGTLAEIRSASGIARSGLVLRLLTGLKQICNHPAHFLKEPEPEPGRPGRSGKLA 754 Query: 58 ALEVI---IEKANAAPIIVAYHFNSDLARLQKAFPQ----------GRTLDKDPCTIQEW 104 L+ + I A+ A ++V + + L++ + G + + ++ + Sbjct: 755 LLDELLGTILAADGA-VLVFTQYVAMARLLERHLRERGVAAQLLHGGTPVPRREEMVRRF 813 Query: 105 NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA 164 +G++P+ + G GLNL + +V + WW+ Q +R + G R Sbjct: 814 QDGEVPVFLLSLKAAGTGLNLTR-ADHVVHYDRWWNPAVEAQATDR-----AHRIGQTRP 867 Query: 165 VFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKK 200 V V+ LIA+ TI++ + + +K + D +L + ++ Sbjct: 868 VQVHRLIAEGTIEDRIAALMESKRELADAVLGSGER 903 >gi|259907055|ref|YP_002647411.1| Putative helicase [Erwinia pyrifoliae Ep1/96] gi|224962677|emb|CAX54132.1| Putative helicase [Erwinia pyrifoliae Ep1/96] Length = 883 Score = 140 bits (353), Expect = 1e-31, Method: Composition-based stats. Identities = 36/175 (20%), Positives = 73/175 (41%), Gaps = 18/175 (10%) Query: 33 LQLANGAVYYDEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQ 90 Q+ + + K H K+ L ++ A I++ F + L + + Sbjct: 696 RQICCDPRLLADARAEKVRHSAKLALLREMLHDLLAEDRRILIFSQFTTMLTIIAGELQK 755 Query: 91 GR---------TLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDL 141 R T D++ ++ + +G++P+ + G GLNL + ++ + WW+ Sbjct: 756 ARIPFVTLTGATRDRNE-PVRSFQQGEVPVFLISLKAGGVGLNLT-AADTVIHYDPWWNP 813 Query: 142 EEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 Q +R + G + VFVY LIA TI+E ++ + K+ + +L+ Sbjct: 814 AAENQATDRAW-----RLGQDKPVFVYKLIAAGTIEEKIVALQQQKAELAGEILD 863 >gi|320526909|ref|ZP_08028099.1| protein, SNF2 family [Solobacterium moorei F0204] gi|320132877|gb|EFW25417.1| protein, SNF2 family [Solobacterium moorei F0204] Length = 1079 Score = 140 bits (353), Expect = 1e-31, Method: Composition-based stats. Identities = 38/203 (18%), Positives = 78/203 (38%), Gaps = 24/203 (11%) Query: 7 FQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKA 66 Q++ + + I ++ + QL + + + K + I+E A Sbjct: 872 LQKQSDEEFKENKIA---VLAELTRLRQLCCDPHLIYDH---YKGNSAKKELCLDIVENA 925 Query: 67 --NAAPIIVAYHFNSDLARLQKAFPQGRTLD----------KDPCTIQEWNEGKIPLLFA 114 I++ F S L L + F + + ++ + +P+ Sbjct: 926 IEEGHKILLFSQFTSMLDTLTQEFDKKGIRYHKLVGSTPQFERARMVESFQTDDVPIFCI 985 Query: 115 HPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQN 174 + G GLNL +I++ + WW+ Q +R + G V V+ LI ++ Sbjct: 986 SLKAGGTGLNLT-AADIVIHYDPWWNTAVENQASDR-----AHRIGQTNVVNVFRLIIKD 1039 Query: 175 TIDELVLQRLRTKSTIQDLLLNA 197 TI+E ++Q + KS + D +L+ Sbjct: 1040 TIEERIIQLQKEKSNLADRILSG 1062 >gi|312877116|ref|ZP_07737087.1| SNF2-related protein [Caldicellulosiruptor lactoaceticus 6A] gi|311796090|gb|EFR12448.1| SNF2-related protein [Caldicellulosiruptor lactoaceticus 6A] Length = 1126 Score = 140 bits (353), Expect = 1e-31, Method: Composition-based stats. Identities = 41/211 (19%), Positives = 85/211 (40%), Gaps = 23/211 (10%) Query: 1 MKQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 +K + E+ + +G S + Q+ + E E K++ E Sbjct: 910 LKAREDIKNEI--EQKGFEKSKIKIFSILTRLRQICCHPKLFLEN---YEGSSGKLELFE 964 Query: 61 VIIEK--ANAAPIIVAYHFNSDLARLQKAFPQ---------GRTLDKDPCTIQE-WNEGK 108 I+E + IV + L L++ G T ++ + +N G+ Sbjct: 965 EILEDVLESGHRAIVFSQWTEMLRILEERIKDRGFEYFYLDGSTKPEERIDMANSFNSGQ 1024 Query: 109 IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVY 168 + + G GLNL G ++++ + LWW+ Q ++R + G + +V V+ Sbjct: 1025 KQVFLISLKAGGFGLNLT-GADVVILYDLWWNPAVENQAMDR-----AHRIGQENSVQVF 1078 Query: 169 YLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 LI +NTI+E + + + K + D ++ + + Sbjct: 1079 RLITKNTIEERIFELQQKKKDLFDTIIQSAQ 1109 >gi|261337693|ref|ZP_05965577.1| SNF2 family protein [Bifidobacterium gallicum DSM 20093] gi|270277134|gb|EFA22988.1| SNF2 family protein [Bifidobacterium gallicum DSM 20093] Length = 1221 Score = 140 bits (353), Expect = 1e-31, Method: Composition-based stats. Identities = 41/210 (19%), Positives = 77/210 (36%), Gaps = 24/210 (11%) Query: 2 KQYHKFQRELYCDLQGENI---EAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKA 58 K Y +R+L LQ + F S + QL E K+ A Sbjct: 1001 KLYAASERKLRMMLQSSQDMNEDRFQVLSALTQLRQLCCDPRLVFEN---VSHAGAKMDA 1057 Query: 59 LEVIIEKA--NAAPIIVAYHFNSDLARLQKAFPQGRT----------LDKDPCTIQEWNE 106 + ++ A + +++ F S L + + + + +N Sbjct: 1058 IAELVTAARESGQKVLIFSQFVSFLDLIADMLDELGVAHMAITGSTPKQRRLELVDTFNM 1117 Query: 107 GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVF 166 P++ + G GLNL G ++++ WW+ Q +R + G + V Sbjct: 1118 DDTPVMLISLKAGGTGLNLT-GASVVIHADPWWNEAAQNQATDR-----AHRIGQRHTVN 1171 Query: 167 VYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 VY ++A +T++E +L KS + LL+ Sbjct: 1172 VYKIVASDTVEERILGLQERKSELARTLLD 1201 >gi|251778792|ref|ZP_04821712.1| SWI/SNF family helicase [Clostridium botulinum E1 str. 'BoNT E Beluga'] gi|243083107|gb|EES48997.1| SWI/SNF family helicase [Clostridium botulinum E1 str. 'BoNT E Beluga'] Length = 1086 Score = 140 bits (353), Expect = 1e-31, Method: Composition-based stats. Identities = 45/209 (21%), Positives = 79/209 (37%), Gaps = 24/209 (11%) Query: 2 KQYHKFQRELYCDLQGENI---EAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKA 58 K Y ++ ++L ++ S K Q+ E KI A Sbjct: 864 KTYSEYAKDLIQKKVEDDEFKNSKIEILSYITKLRQICLDPSVIMEN---YLGTSGKIDA 920 Query: 59 LEVIIEKA--NAAPIIVAYHFNSDLARLQKAFPQGRTLDK----------DPCTIQEWNE 106 L I++ + + I+V F S L + + L + ++NE Sbjct: 921 LLEILDHSISSGHKILVFSQFTSVLKNIGNLLKENNILFSYLDGSVSSINRMRMVDDFNE 980 Query: 107 GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVF 166 G+ + + G GLNL +I++ F WW+ Q +R + G + V Sbjct: 981 GENNVFLVSLKAGGTGLNLT-SADIVIHFDPWWNPAVEDQATDR-----AHRIGQENTVE 1034 Query: 167 VYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 V LIAQ TI+E +++ +K + D +L Sbjct: 1035 VIKLIAQGTIEEKIVELQDSKRKLIDTIL 1063 >gi|227505607|ref|ZP_03935656.1| helicase [Corynebacterium striatum ATCC 6940] gi|227197760|gb|EEI77808.1| helicase [Corynebacterium striatum ATCC 6940] Length = 1087 Score = 140 bits (353), Expect = 1e-31, Method: Composition-based stats. Identities = 42/202 (20%), Positives = 75/202 (37%), Gaps = 23/202 (11%) Query: 8 QRELYCDL--QGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEK 65 +R+ L + + + QLA + E K+ A+ ++ Sbjct: 875 ERQRVLRLLTEDPESNRVEVLAALTRLRQLAISPTLVEPESGA---PSSKLDAMTGLLRD 931 Query: 66 --ANAAPIIVAYHFNSDLARLQKAFP---------QGRTLDKDPCTIQEWNEGKIPLLFA 114 A +++ F S LA ++ G T D+D I+ + EG + Sbjct: 932 ILAEEHRVLIFSQFTSYLAEIRARLEAEGVSFSYLDGGTRDRD-AAIRAFTEGNTQVFLI 990 Query: 115 HPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQN 174 + G GLNL + ++ WW+ Q I+R + G + V VY L++ N Sbjct: 991 SLKAGGVGLNLTQ-ADYVIVADPWWNPAAEAQAIDR-----AHRIGQTQPVTVYRLVSAN 1044 Query: 175 TIDELVLQRLRTKSTIQDLLLN 196 TI++ V+ TK + L Sbjct: 1045 TIEDKVVALQDTKRALSSAFLE 1066 >gi|16800753|ref|NP_471021.1| hypothetical protein lin1685 [Listeria innocua Clip11262] gi|16414172|emb|CAC96916.1| lin1685 [Listeria innocua Clip11262] Length = 1072 Score = 140 bits (352), Expect = 1e-31, Method: Composition-based stats. Identities = 45/210 (21%), Positives = 83/210 (39%), Gaps = 25/210 (11%) Query: 3 QYHKFQRELYCDLQGENIEAFNS----ASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKA 58 Y + ++ DL+ N A + + Q+ + E + K+ Sbjct: 845 IYLAYLEKIQADLEESNGNASEERIKLLAGLTRLRQICCDPSLFVEN---YQGESGKLLQ 901 Query: 59 LEVIIEKA--NAAPIIVAYHFNSDLARLQKAFPQ---------GRTLDKDPCT-IQEWNE 106 L I+ A N I++ F LA +++ + G+T K + +NE Sbjct: 902 LFDTIQTARENGKRILIFSQFTGMLAIIRRKLEEDGQPLFYMDGKTPAKTRLDMVNAFNE 961 Query: 107 GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVF 166 G+ + + G GLNL G + ++ + LWW+ +Q R + G KR V Sbjct: 962 GENDIFLISLKAGGTGLNL-VGADTVILYDLWWNPAVEEQATGR-----AHRIGQKRVVQ 1015 Query: 167 VYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 V+ +I + TI+E + + K + D L+ Sbjct: 1016 VFRMITKGTIEERIFDLQKKKQALVDELIQ 1045 >gi|289706474|ref|ZP_06502828.1| SNF2 family N-terminal domain protein [Micrococcus luteus SK58] gi|289556793|gb|EFD50130.1| SNF2 family N-terminal domain protein [Micrococcus luteus SK58] Length = 1143 Score = 140 bits (352), Expect = 1e-31, Method: Composition-based stats. Identities = 51/213 (23%), Positives = 86/213 (40%), Gaps = 30/213 (14%) Query: 2 KQYHK-FQRE------LYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDE 54 K Y + QRE L D+ G F S + LA D+ + V Sbjct: 916 KLYDRVLQRERRKVLGLLGDMDGNRFTIFKSLTL---LRMLALAPQIVDD--QYASVPSS 970 Query: 55 KIKA-LEVIIEK-ANAAPIIVAYHFNSDLA---------RLQKAFPQGRTLDKDPCTIQE 103 K++ L+ + E +IV F S L ++ A+ G T + I+ Sbjct: 971 KLERFLDDLTEVIGEGHRVIVFSQFTSFLRVIAEELDHLEIEHAYLDGSTRGRAE-VIRG 1029 Query: 104 WNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKR 163 + EG+ P+ + G GL L + + WW+ Q ++R + G +R Sbjct: 1030 FREGEAPVFLISLKAGGFGLTLTE-ADYVFLMDPWWNPAAEAQAVDR-----AHRIGQER 1083 Query: 164 AVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 V VY L+++ TI+E VL+ R K+ + L++ Sbjct: 1084 TVMVYRLVSEGTIEEKVLELQRRKAELFGALMD 1116 >gi|282862053|ref|ZP_06271116.1| SNF2-related protein [Streptomyces sp. ACTE] gi|282563078|gb|EFB68617.1| SNF2-related protein [Streptomyces sp. ACTE] Length = 979 Score = 140 bits (352), Expect = 1e-31, Method: Composition-based stats. Identities = 41/214 (19%), Positives = 82/214 (38%), Gaps = 23/214 (10%) Query: 3 QYHKFQRELYCDLQGENIEAFNSA--SKTVKCLQLANG-AVYYDEEKHWKEVHDEKIKAL 59 Y RE ++ A Q+ N A Y EE K+ L Sbjct: 753 LYEAAVRETMTFIESAEGIARRGLIMKLLGSLKQICNHPAQYLKEEPTRLAGRSGKLALL 812 Query: 60 EVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTLD-----------KDPCTIQEWNE 106 + +++ A +++ + S ARL A R + + + + Sbjct: 813 DELLDTILAEDGSVLIFTQYVSM-ARLLSAHLASRAIPSQLLHGGTPVAERERMVDRFQS 871 Query: 107 GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVF 166 ++P+ + G GLNL + ++ + WW+ +Q +R + G + V Sbjct: 872 AEVPVFLLSLKAAGTGLNLTRAAH-VIHYDRWWNPAVEEQATDR-----AYRIGQTQPVQ 925 Query: 167 VYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKK 200 V+ LIA+ T+++ + + LR+K + D +L + + Sbjct: 926 VHRLIAEGTVEDRISELLRSKRALADAVLGSGEA 959 >gi|187934555|ref|YP_001886021.1| SWI/SNF family helicase [Clostridium botulinum B str. Eklund 17B] gi|187722708|gb|ACD23929.1| SWI/SNF family helicase [Clostridium botulinum B str. Eklund 17B] Length = 1086 Score = 140 bits (352), Expect = 1e-31, Method: Composition-based stats. Identities = 44/209 (21%), Positives = 79/209 (37%), Gaps = 24/209 (11%) Query: 2 KQYHKFQRELYCDLQGENI---EAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKA 58 K Y ++ ++L ++ S K Q+ E KI A Sbjct: 864 KTYSEYAKDLIQKKVEDDEFKNSKIEILSYITKLRQICLDPSVIMEN---YLGTSGKIDA 920 Query: 59 LEVIIEKA--NAAPIIVAYHFNSDLARLQKAFPQGRTLDK----------DPCTIQEWNE 106 L I++ + + I+V F S L + + L + ++N+ Sbjct: 921 LLEILDHSISSGHKILVFSQFTSVLKNIGNLLKENNILFSYLDGSVSSINRMRMVDDFND 980 Query: 107 GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVF 166 G+ + + G GLNL +I++ F WW+ Q +R + G + V Sbjct: 981 GENNVFLVSLKAGGTGLNLT-SADIVIHFDPWWNPAVEDQATDR-----AHRIGQENTVE 1034 Query: 167 VYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 V LIAQ TI+E +++ +K + D +L Sbjct: 1035 VIKLIAQGTIEEKIVELQDSKRKLIDTIL 1063 >gi|188587846|ref|YP_001921061.1| SWI/SNF family helicase [Clostridium botulinum E3 str. Alaska E43] gi|188498127|gb|ACD51263.1| SWI/SNF family helicase [Clostridium botulinum E3 str. Alaska E43] Length = 1086 Score = 140 bits (352), Expect = 1e-31, Method: Composition-based stats. Identities = 44/209 (21%), Positives = 79/209 (37%), Gaps = 24/209 (11%) Query: 2 KQYHKFQRELYCDLQGENI---EAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKA 58 K Y ++ ++L ++ S K Q+ E KI A Sbjct: 864 KTYSEYAKDLIQKKVEDDEFKNSKIEILSYITKLRQICLDPSVIMEN---YLGTSGKIDA 920 Query: 59 LEVIIEKA--NAAPIIVAYHFNSDLARLQKAFPQGRTLDK----------DPCTIQEWNE 106 L I++ + + I+V F S L + + L + ++N+ Sbjct: 921 LLEILDHSISSGHKILVFSQFTSVLKNIGNLLKENNILFSYLDGSVSSINRMRMVDDFND 980 Query: 107 GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVF 166 G+ + + G GLNL +I++ F WW+ Q +R + G + V Sbjct: 981 GENNVFLVSLKAGGTGLNLT-SADIVIHFDPWWNPAVEDQATDR-----AHRIGQENTVE 1034 Query: 167 VYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 V LIAQ TI+E +++ +K + D +L Sbjct: 1035 VIKLIAQGTIEEKIVELQDSKRKLIDTIL 1063 >gi|223936025|ref|ZP_03627939.1| Non-specific serine/threonine protein kinase [bacterium Ellin514] gi|223895247|gb|EEF61694.1| Non-specific serine/threonine protein kinase [bacterium Ellin514] Length = 1046 Score = 140 bits (352), Expect = 2e-31, Method: Composition-based stats. Identities = 37/204 (18%), Positives = 77/204 (37%), Gaps = 20/204 (9%) Query: 8 QRELYCDLQGENIEAFN--SASKTVKCLQLANGAVYYDEEKHWK-EVHDEKIKALEVIIE 64 ++E+ + + + ++ Q+ + + K K++ ++E Sbjct: 830 RKEIVNAVDANGLNKSRMVVLTALLRLRQICCDLRLLESKLEAKPSEPSGKVELFGELLE 889 Query: 65 K--ANAAPIIVAYHFNSDLARLQKA---------FPQGRTLDKDPCTIQEWNEGKIPLLF 113 + ++V F + L L++ + G T D+ + + +IP+ Sbjct: 890 EVVDGGHRVLVFSQFTTMLGLLRERLAAENIEFCYLDGATKDRAQVVERFQRDSRIPVFL 949 Query: 114 AHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQ 173 + G GLNL G + ++ F WW+ Q +R + G KR V Y LI + Sbjct: 950 ISLKAGGTGLNLT-GADTVIHFDPWWNPAVEAQATDR-----AHRIGQKRVVTSYKLITR 1003 Query: 174 NTIDELVLQRLRTKSTIQDLLLNA 197 T++E +L K + +L Sbjct: 1004 GTVEEKILNLQTRKRALFQGMLGG 1027 >gi|116873076|ref|YP_849857.1| DNA/RNA helicase protein [Listeria welshimeri serovar 6b str. SLCC5334] gi|116741954|emb|CAK21078.1| DNA/RNA helicase protein [Listeria welshimeri serovar 6b str. SLCC5334] Length = 1072 Score = 140 bits (352), Expect = 2e-31, Method: Composition-based stats. Identities = 45/210 (21%), Positives = 83/210 (39%), Gaps = 25/210 (11%) Query: 3 QYHKFQRELYCDLQGENIEAFNS----ASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKA 58 Y + ++ DL+ N A + + Q+ + E + K+ Sbjct: 845 IYLAYLEKIQADLEESNGNAGEERIKLLAGLTRLRQICCDPSLFVEN---YQGESGKLLQ 901 Query: 59 LEVIIEKA--NAAPIIVAYHFNSDLARLQKAFPQ---------GRTLDKDPCT-IQEWNE 106 L I+ A N I++ F LA +++ + G+T K + +NE Sbjct: 902 LFDTIQTARENGKRILIFSQFTGMLAIIRRKLEEEGHSLFYMDGKTPAKTRLDMVNAFNE 961 Query: 107 GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVF 166 G+ + + G GLNL G + ++ + LWW+ +Q R + G KR V Sbjct: 962 GENDIFLISLKAGGTGLNL-VGADTVILYDLWWNPAVEEQATGR-----AHRIGQKRVVQ 1015 Query: 167 VYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 V+ +I + TI+E + + K + D L+ Sbjct: 1016 VFRMITKGTIEERIFDLQKKKQALVDELIQ 1045 >gi|310766267|gb|ADP11217.1| SWI/SNF-like matrix-associated actin-dependent regulator of chromatin subfamily A member 5 [Erwinia sp. Ejp617] Length = 852 Score = 139 bits (351), Expect = 2e-31, Method: Composition-based stats. Identities = 36/175 (20%), Positives = 73/175 (41%), Gaps = 18/175 (10%) Query: 33 LQLANGAVYYDEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQ 90 Q+ + + K H K+ L ++ A I++ F + L + + Sbjct: 665 RQICCDPRLLADARAEKVRHSAKLALLREMLHDLLAEDRRILIFSQFTTMLTIIAGELQK 724 Query: 91 GR---------TLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDL 141 R T D++ ++ + +G++P+ + G GLNL + ++ + WW+ Sbjct: 725 ARIPFVTLTGATRDRNE-PVRSFQQGEVPVFLISLKAGGVGLNLT-AADTVIHYDPWWNP 782 Query: 142 EEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 Q +R + G + VFVY LIA TI+E ++ + K+ + +L+ Sbjct: 783 AAENQATDRAW-----RLGQDKPVFVYKLIAAGTIEEKIVALQQQKAELAGEILD 832 >gi|283476853|emb|CAY72692.1| SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 [Erwinia pyrifoliae DSM 12163] Length = 852 Score = 139 bits (351), Expect = 2e-31, Method: Composition-based stats. Identities = 36/175 (20%), Positives = 73/175 (41%), Gaps = 18/175 (10%) Query: 33 LQLANGAVYYDEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQ 90 Q+ + + K H K+ L ++ A I++ F + L + + Sbjct: 665 RQICCDPRLLADARAEKVRHSAKLALLREMLHDLLAEDRRILIFSQFTTMLTIIAGELQK 724 Query: 91 GR---------TLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDL 141 R T D++ ++ + +G++P+ + G GLNL + ++ + WW+ Sbjct: 725 ARIPFVTLTGATRDRNE-PVRSFQQGEVPVFLISLKAGGVGLNLT-AADTVIHYDPWWNP 782 Query: 142 EEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 Q +R + G + VFVY LIA TI+E ++ + K+ + +L+ Sbjct: 783 AAENQATDRAW-----RLGQDKPVFVYKLIAAGTIEEKIVALQQQKAELAGEILD 832 >gi|239946094|ref|ZP_04698031.1| SNF2/RAD54 family helicase [Streptomyces roseosporus NRRL 15998] gi|239992567|ref|ZP_04713231.1| SNF2/RAD54 family helicase [Streptomyces roseosporus NRRL 11379] Length = 1005 Score = 139 bits (351), Expect = 2e-31, Method: Composition-based stats. Identities = 46/216 (21%), Positives = 85/216 (39%), Gaps = 27/216 (12%) Query: 3 QYHKFQRELYCDLQGENIEAFNSASKTVKCL----QLANG-AVYYDEEKHWKEVHDEKIK 57 Y RE ++ + F +K L Q+ N A + EE+ K++ Sbjct: 778 LYEAVVRETLAEISA--ADGFERRGLVMKLLTSLKQICNHPAQFLKEEQPRIADRSGKVE 835 Query: 58 ALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTLD-----------KDPCTIQEW 104 L+ +++ A ++V + ARL + R +D + + + Sbjct: 836 LLDELLDTILAERGSVLVFTQYVQM-ARLLEEHLAARGVDTQFLHGGTPVARREEMVARF 894 Query: 105 NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA 164 G+ P+ + G GLNL G+ +V F WW+ Q +R + G + Sbjct: 895 QSGEAPVFLLSLKAAGTGLNLTRAGH-VVHFDRWWNPAVEAQATDR-----AYRIGQTQP 948 Query: 165 VFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKK 200 V V+ LIA+ TI++ + L K + D +L + + Sbjct: 949 VQVHRLIAEGTIEDRIAGMLARKQGLADAVLGSGEA 984 >gi|330840007|ref|YP_004414587.1| SNF2-related protein [Selenomonas sputigena ATCC 35185] gi|329747771|gb|AEC01128.1| SNF2-related protein [Selenomonas sputigena ATCC 35185] Length = 1091 Score = 139 bits (351), Expect = 2e-31, Method: Composition-based stats. Identities = 42/213 (19%), Positives = 83/213 (38%), Gaps = 27/213 (12%) Query: 2 KQYH----KFQRELYCDLQGEN--IEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEK 55 K YH + ++E +L+ + + Q+A + E+ K Sbjct: 869 KVYHAWFVQAKKEFAAELKAHGFGESRIKILAILTRLRQIACDPALFLEDYT---GGSGK 925 Query: 56 IKALEVIIEKA--NAAPIIVAYHFNSDLARLQ---------KAFPQGRT-LDKDPCTIQE 103 + LE ++ A I++ F + L+ + A+ G T + +++ Sbjct: 926 LDMLEEVVADAVAAGHRILIFSQFTTMLSHIAARLDVMNLSYAYLDGSTPALERMRRVRD 985 Query: 104 WNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKR 163 +N G PL + G GLNL G ++++ + WW+ Q +R + G K Sbjct: 986 FNAGAEPLFLISLKAGGTGLNLT-GADMVIHYDPWWNPAVEDQATDR-----AYRIGQKN 1039 Query: 164 AVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 V V I ++TI+E + + K + D ++ Sbjct: 1040 NVQVLKFITKDTIEEKIYELQEKKKALIDQMIQ 1072 >gi|323692122|ref|ZP_08106366.1| hypothetical protein HMPREF9475_01229 [Clostridium symbiosum WAL-14673] gi|323503809|gb|EGB19627.1| hypothetical protein HMPREF9475_01229 [Clostridium symbiosum WAL-14673] Length = 1079 Score = 139 bits (351), Expect = 2e-31, Method: Composition-based stats. Identities = 38/210 (18%), Positives = 80/210 (38%), Gaps = 26/210 (12%) Query: 3 QYHKFQRELYCDLQGENIEAFNS-----ASKTVKCLQLANGAVYYDEEKHWKEVHDEKIK 57 Y +L L+ + A S ++ + QL E + K++ Sbjct: 858 LYRAAALKLRQSLEEDEKTAETSGKFQILAELTRLRQLCCDPSLCFERYN---GESAKLE 914 Query: 58 ALEVIIEKA--NAAPIIVAYHFNSDLARLQKAFPQ----------GRTLDKDPCTIQEWN 105 ++ A + I++ F S L + + T ++ + ++ Sbjct: 915 TCVSLLLSAAESGHKILLFSQFASMLGIIGNRLKKEGIPFYLLTGSTTKEERNKMVNAFH 974 Query: 106 EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 ++P+ + G GLNL +I++ + WW++ Q +R + G ++ V Sbjct: 975 RDQVPVFLISLKAGGTGLNLT-AADIVIHYDPWWNVAAQNQATDR-----AHRIGQEKQV 1028 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 VY LI ++TI+E +L K + D ++ Sbjct: 1029 TVYKLIMKDTIEENILNLQEAKKNLADQIV 1058 >gi|293375830|ref|ZP_06622099.1| SNF2 family N-terminal domain protein [Turicibacter sanguinis PC909] gi|292645538|gb|EFF63579.1| SNF2 family N-terminal domain protein [Turicibacter sanguinis PC909] Length = 1080 Score = 139 bits (351), Expect = 2e-31, Method: Composition-based stats. Identities = 34/204 (16%), Positives = 82/204 (40%), Gaps = 23/204 (11%) Query: 6 KFQRELYCDLQGENIEAF--NSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVII 63 + ++E++ +++ +E + ++ QL Y E K+ ++ Sbjct: 861 QMKQEMHHEIEEVGVERSRIKILALLMRLRQLCCHPSLYLEN---YRGESAKLNLCMQLV 917 Query: 64 EK--ANAAPIIVAYHFNSDLA---------RLQKAFPQGRTLDKDPCTI-QEWNEGKIPL 111 + A+ +++ F S L ++ G T D + +++N+ + Sbjct: 918 QDCIASGHKVLIFSQFTSMLEILGRELKAKEIKFLTLTGATKTSDRLALTEQFNQDDTKV 977 Query: 112 LFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLI 171 + G GLNL G ++++ + WW++ Q +R + G + V V+ L+ Sbjct: 978 FLISLKAGGTGLNLT-GADVVIHYDPWWNMSAQNQATDR-----AHRLGQDKTVQVFKLM 1031 Query: 172 AQNTIDELVLQRLRTKSTIQDLLL 195 +NTI+E + K + + ++ Sbjct: 1032 VKNTIEERIQVLQEQKRDLTEAIV 1055 >gi|260888136|ref|ZP_05899399.1| helicase, Snf2 family [Selenomonas sputigena ATCC 35185] gi|260862165|gb|EEX76665.1| helicase, Snf2 family [Selenomonas sputigena ATCC 35185] Length = 1098 Score = 139 bits (351), Expect = 2e-31, Method: Composition-based stats. Identities = 42/213 (19%), Positives = 83/213 (38%), Gaps = 27/213 (12%) Query: 2 KQYH----KFQRELYCDLQGEN--IEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEK 55 K YH + ++E +L+ + + Q+A + E+ K Sbjct: 876 KVYHAWFVQAKKEFAAELKAHGFGESRIKILAILTRLRQIACDPALFLEDYT---GGSGK 932 Query: 56 IKALEVIIEKA--NAAPIIVAYHFNSDLARLQ---------KAFPQGRT-LDKDPCTIQE 103 + LE ++ A I++ F + L+ + A+ G T + +++ Sbjct: 933 LDMLEEVVADAVAAGHRILIFSQFTTMLSHIAARLDVMNLSYAYLDGSTPALERMRRVRD 992 Query: 104 WNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKR 163 +N G PL + G GLNL G ++++ + WW+ Q +R + G K Sbjct: 993 FNAGAEPLFLISLKAGGTGLNLT-GADMVIHYDPWWNPAVEDQATDR-----AYRIGQKN 1046 Query: 164 AVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 V V I ++TI+E + + K + D ++ Sbjct: 1047 NVQVLKFITKDTIEEKIYELQEKKKALIDQMIQ 1079 >gi|326789214|ref|YP_004307035.1| SNF2-related protein [Clostridium lentocellum DSM 5427] gi|326539978|gb|ADZ81837.1| SNF2-related protein [Clostridium lentocellum DSM 5427] Length = 1119 Score = 139 bits (351), Expect = 2e-31, Method: Composition-based stats. Identities = 38/204 (18%), Positives = 84/204 (41%), Gaps = 25/204 (12%) Query: 8 QRELYCDLQGENIEAFNS--ASKTVKCLQLANGA-VYYDEEKHWKEVHDEKIKALEVIIE 64 ++E+ +L+ + + A + + + QL +Y + K++ I++ Sbjct: 905 KKEMEEELKAKGVGASHIKMLALLTRLRQLCCHPSMYLQDYTE----TSGKLEQCMEIVK 960 Query: 65 KA--NAAPIIVAYHFNSDLAR---------LQKAFPQGRTLDKDP-CTIQEWNEGKIPLL 112 + I++ F + L ++ G T ++ + E+N IP+ Sbjct: 961 DSIEAGHKILLFSQFTTMLDILSNRLYSEGIEHFMLTGSTKAEERMRLVNEFNTSDIPVF 1020 Query: 113 FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIA 172 + G GLNL G ++++ + WW+L Q +R + G K V V+ +I Sbjct: 1021 LISLKAGGTGLNLT-GADVVIHYDPWWNLSSQNQATDR-----AYRIGQKNKVQVFQMIT 1074 Query: 173 QNTIDELVLQRLRTKSTIQDLLLN 196 +N+I+E + + K + + +L Sbjct: 1075 KNSIEEKIKELQDKKIGLTESVLQ 1098 >gi|212715703|ref|ZP_03323831.1| hypothetical protein BIFCAT_00603 [Bifidobacterium catenulatum DSM 16992] gi|212661070|gb|EEB21645.1| hypothetical protein BIFCAT_00603 [Bifidobacterium catenulatum DSM 16992] Length = 1239 Score = 139 bits (351), Expect = 2e-31, Method: Composition-based stats. Identities = 40/223 (17%), Positives = 78/223 (34%), Gaps = 30/223 (13%) Query: 2 KQYHKFQRELYCDLQGENIEAFNS-----ASKTVKCLQLANGA--VYYDEEKHWKEVHDE 54 K Y ++ L L FN+ ++ ++ VY D + Sbjct: 1017 KLYAAHEQRLRATLTKTKDADFNTKKIRILAEFTLLREICCDPRLVYADAKN-----ASA 1071 Query: 55 KIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRT----------LDKDPCTIQ 102 K+ A+ ++ ++V F S L + + + + Sbjct: 1072 KLDAICELVSTCMDEGKKVLVFSQFTSFLDLIGTRLAEHGVDFYTITGETPKKRRVELVD 1131 Query: 103 EWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFK 162 E+N IP+ + GLNL G +++V WW+ Q +R + G Sbjct: 1132 EFNGNDIPVFLISLKAGNTGLNL-VGASVVVHADPWWNAAAQNQATDR-----AHRIGQT 1185 Query: 163 RAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIHV 205 + V VY ++A++TI+E +L+ KS + + + Sbjct: 1186 QDVNVYQIVAKDTIEERILKLQEKKSELAQQFTDGTASGGVGT 1228 >gi|323486739|ref|ZP_08092059.1| SNF2 family Superfamily II DNA/RNA helicase [Clostridium symbiosum WAL-14163] gi|323399958|gb|EGA92336.1| SNF2 family Superfamily II DNA/RNA helicase [Clostridium symbiosum WAL-14163] Length = 1059 Score = 139 bits (351), Expect = 2e-31, Method: Composition-based stats. Identities = 38/210 (18%), Positives = 80/210 (38%), Gaps = 26/210 (12%) Query: 3 QYHKFQRELYCDLQGENIEAFNS-----ASKTVKCLQLANGAVYYDEEKHWKEVHDEKIK 57 Y +L L+ + A S ++ + QL E + K++ Sbjct: 838 LYRAAALKLRQSLEEDEKTAETSGKFQILAELTRLRQLCCDPSLCFERYN---GESAKLE 894 Query: 58 ALEVIIEKA--NAAPIIVAYHFNSDLARLQKAFPQ----------GRTLDKDPCTIQEWN 105 ++ A + I++ F S L + + T ++ + ++ Sbjct: 895 TCVSLLLSAAESGHKILLFSQFASMLGIIGNRLKKEGIPFYLLTGSTTKEERNKMVNAFH 954 Query: 106 EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 ++P+ + G GLNL +I++ + WW++ Q +R + G ++ V Sbjct: 955 RDQVPVFLISLKAGGTGLNLT-AADIVIHYDPWWNVAAQNQATDR-----AHRIGQEKQV 1008 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 VY LI ++TI+E +L K + D ++ Sbjct: 1009 TVYKLIMKDTIEENILNLQEAKKNLADQIV 1038 >gi|325841031|ref|ZP_08167240.1| SNF2 family N-terminal domain protein [Turicibacter sp. HGF1] gi|325490097|gb|EGC92440.1| SNF2 family N-terminal domain protein [Turicibacter sp. HGF1] Length = 1080 Score = 139 bits (351), Expect = 2e-31, Method: Composition-based stats. Identities = 34/204 (16%), Positives = 82/204 (40%), Gaps = 23/204 (11%) Query: 6 KFQRELYCDLQGENIEAF--NSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVII 63 + ++E++ +++ +E + ++ QL Y E K+ ++ Sbjct: 861 QMKQEMHHEIEEVGVERSRIKILALLMRLRQLCCHPSLYLEN---YRGESAKLNLCMQLV 917 Query: 64 EK--ANAAPIIVAYHFNSDLA---------RLQKAFPQGRTLDKDPCTI-QEWNEGKIPL 111 + A+ +++ F S L ++ G T D + +++N+ + Sbjct: 918 QDCIASGHKVLIFSQFTSMLEILGRELKAKEIKFLTLTGATKTSDRLALTEQFNQDDTKV 977 Query: 112 LFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLI 171 + G GLNL G ++++ + WW++ Q +R + G + V V+ L+ Sbjct: 978 FLISLKAGGTGLNLT-GADVVIHYDPWWNMSAQNQATDR-----AHRLGQDKTVQVFKLM 1031 Query: 172 AQNTIDELVLQRLRTKSTIQDLLL 195 +NTI+E + K + + ++ Sbjct: 1032 VKNTIEERIQVLQEQKRDLTEAIV 1055 >gi|296132117|ref|YP_003639364.1| SNF2-related protein [Thermincola sp. JR] gi|296030695|gb|ADG81463.1| SNF2-related protein [Thermincola potens JR] Length = 1084 Score = 139 bits (351), Expect = 2e-31, Method: Composition-based stats. Identities = 36/183 (19%), Positives = 74/183 (40%), Gaps = 21/183 (11%) Query: 26 ASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLAR 83 + + Q+ + E K++ L+ +IE A I++ F S L Sbjct: 891 LAALTRLRQICCHPGLFIENYT---GDSGKMQLLQEVIEDALAGGHRILLFSQFTSMLGI 947 Query: 84 LQK---------AFPQGRTL-DKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILV 133 +++ + G T ++ ++ +N G + + G GLNL G +++V Sbjct: 948 IREYLVSQNIEYHYLDGNTRAEQRQEMVRAFNAGDGQVFLISLKAGGTGLNLT-GADMVV 1006 Query: 134 FFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDL 193 F WW+ Q +R + G ++ V V+ L+ + TI+E + + K + D Sbjct: 1007 HFDPWWNPAVEDQATDR-----AYRIGQQQVVQVFKLVTRGTIEEKIFTLQQKKKELIDS 1061 Query: 194 LLN 196 ++ Sbjct: 1062 VIQ 1064 >gi|77361962|ref|YP_341536.1| helicase domain-containing protein [Pseudoalteromonas haloplanktis TAC125] gi|76876873|emb|CAI89090.1| putative protein with helicase domain [Pseudoalteromonas haloplanktis TAC125] Length = 1351 Score = 139 bits (351), Expect = 2e-31, Method: Composition-based stats. Identities = 43/208 (20%), Positives = 76/208 (36%), Gaps = 21/208 (10%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEV 61 Y + E+ + + K + + ++ K+ E Sbjct: 1134 ALYEATRLNALEQASQEDSQYITILASLTKLRR---ACIAPQLLIENSKLPSSKLDTAEA 1190 Query: 62 IIEKA--NAAPIIVAYHFNSDLARLQKAFPQGRTL----------DKDPCTIQEWNEGKI 109 IIE+ N ++ F L +++ + +K + ++ G+ Sbjct: 1191 IIEELLENDHQALIFSQFVDVLKLVEQRLKKRGIAYCYLDGSMSSNKRKQQVDKFQAGEA 1250 Query: 110 PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYY 169 PL + G GLNL + ++ WW+ QQ +R + G R V VY Sbjct: 1251 PLFLISLKAGGTGLNLT-AADYVLHLDPWWNPAVEQQASDR-----AHRLGQTRPVTVYR 1304 Query: 170 LIAQNTIDELVLQRLRTKSTIQDLLLNA 197 LIAQNTI+E +LQ K + D +L+ Sbjct: 1305 LIAQNTIEEKILQLHEHKQALADKVLSG 1332 >gi|300786586|ref|YP_003766877.1| SNF2/RAD54 family helicase [Amycolatopsis mediterranei U32] gi|299796100|gb|ADJ46475.1| SNF2/RAD54 family helicase [Amycolatopsis mediterranei U32] Length = 838 Score = 139 bits (351), Expect = 2e-31, Method: Composition-based stats. Identities = 40/220 (18%), Positives = 80/220 (36%), Gaps = 30/220 (13%) Query: 1 MKQYHKFQRELYCDLQGENIEAFNS--ASKTVKCLQLANGAVYY------DEEKHWKEVH 52 + Y RE+ ++ + A Q+ N Y DE Sbjct: 609 VALYEAVVREMMAEIAASDGMARRGRIVKLLTALKQICNHPAQYLKARSLDEGG----GR 664 Query: 53 DEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQ----------GRTLDKDPCT 100 K++ L+ +++ A ++V + + L+K G + + Sbjct: 665 SGKVELLDELLDTILAEDGAVLVFTQYVAMARLLEKHLAGRGIATQLLHGGTPVPRREEL 724 Query: 101 IQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 + + G +P+ + G GLNL + +V F WW+ Q +R + G Sbjct: 725 VARFQAGAVPVFLLSLKAAGTGLNLTR-ADHVVHFDRWWNPAVEDQATDR-----AYRIG 778 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKK 200 R V V+ L+A+ T+++ + LR K + + +L + Sbjct: 779 QTRPVQVHRLVAEGTVEDRIAAMLREKRALAEAVLAGGEA 818 >gi|148360611|ref|YP_001251818.1| SNF2/RAD54 family transporter domain-containing protein [Legionella pneumophila str. Corby] gi|148282384|gb|ABQ56472.1| DNA helicase, SNF2/RAD54 family domain protein [Legionella pneumophila str. Corby] Length = 1088 Score = 139 bits (351), Expect = 2e-31, Method: Composition-based stats. Identities = 33/164 (20%), Positives = 67/164 (40%), Gaps = 18/164 (10%) Query: 44 EEKHWKEVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQKAF---------PQGR 92 E K+ AL +++ ++V F S L +++ G+ Sbjct: 911 SEAEIAHGTSCKLDALMELLDNLVEEGRRVLVFSQFTSMLKLIEELLIARQYDYLKLTGQ 970 Query: 93 TLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIG 152 T ++ ++++ +G P+ + G GLNL + ++ + WW+ Q +R Sbjct: 971 TQNRQ-ALVEQFQQGDTPIFLISLKAGGTGLNLTR-ADTVIHYDPWWNPSVEDQATDR-- 1026 Query: 153 VTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + G + VFVY LI T++E +L K + + +L+ Sbjct: 1027 ---THRIGQESPVFVYKLITSGTVEEAILGMQEKKRQLVEGILS 1067 >gi|154488684|ref|ZP_02029533.1| hypothetical protein BIFADO_01991 [Bifidobacterium adolescentis L2-32] gi|154082821|gb|EDN81866.1| hypothetical protein BIFADO_01991 [Bifidobacterium adolescentis L2-32] Length = 1272 Score = 139 bits (351), Expect = 2e-31, Method: Composition-based stats. Identities = 40/223 (17%), Positives = 81/223 (36%), Gaps = 30/223 (13%) Query: 2 KQYHKFQRELYCDLQGENIEAFNS-----ASKTVKCLQLANGA--VYYDEEKHWKEVHDE 54 K Y ++ L L + FN+ ++ ++ VY D + Sbjct: 1050 KLYAAHEQRLRATLTKASDADFNTKKIRILAEFTLLREICCDPRLVYADAKN-----ASA 1104 Query: 55 KIKALEVIIEK--ANAAPIIVAYHFNSDLARL---------QKAFPQGRT-LDKDPCTIQ 102 K+ A+ ++ ++V F S L + + G T + + Sbjct: 1105 KLDAIAELVATCMGEGKKVLVFSQFTSFLELIGARLAEQGVEYYTITGETPKKRRVELVD 1164 Query: 103 EWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFK 162 E+N +P+ + GLNL G +++V WW+ Q +R + G Sbjct: 1165 EFNGNDVPVFLISLKAGNTGLNL-VGASVVVHADPWWNAAAQNQATDR-----AHRIGQT 1218 Query: 163 RAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIHV 205 + V VY ++A++TI+E +L+ K+ + + + Sbjct: 1219 QDVNVYQIVAKDTIEERILKLQEKKNELARQFTDGTASGGVGT 1261 >gi|149198233|ref|ZP_01875280.1| swf/snf family helicase [Lentisphaera araneosa HTCC2155] gi|149138835|gb|EDM27241.1| swf/snf family helicase [Lentisphaera araneosa HTCC2155] Length = 1308 Score = 139 bits (351), Expect = 2e-31, Method: Composition-based stats. Identities = 41/192 (21%), Positives = 77/192 (40%), Gaps = 21/192 (10%) Query: 16 QGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKAN--AAPIIV 73 G+ + F + + Q A D++ K+K ++++ +V Sbjct: 1107 GGDRNDKFFILEEITRLRQAACSPSLLDKQ---FSDQSAKLKRFIELVKELKEAGHRALV 1163 Query: 74 AYHFNSDLARLQKAFPQ----------GRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGL 123 F S L ++KA + K P ++++ GK + + G GL Sbjct: 1164 FSQFTSFLDLVEKALAEEDVDFLRLDGSTPAKKRPQLVKKFQVGKSSVFLISLKAGGFGL 1223 Query: 124 NLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQR 183 NL N ++ WW+ Q +R + G ++AV VY LI++ TI+E +L+ Sbjct: 1224 NLT-AANYVIHLDPWWNPAVEDQATDR-----AHRIGQEKAVTVYRLISEGTIEEKILKL 1277 Query: 184 LRTKSTIQDLLL 195 +K + D +L Sbjct: 1278 HESKRELADFML 1289 >gi|289434930|ref|YP_003464802.1| helicase, Snf2 family [Listeria seeligeri serovar 1/2b str. SLCC3954] gi|289171174|emb|CBH27716.1| helicase, Snf2 family [Listeria seeligeri serovar 1/2b str. SLCC3954] Length = 1071 Score = 139 bits (351), Expect = 2e-31, Method: Composition-based stats. Identities = 43/208 (20%), Positives = 82/208 (39%), Gaps = 21/208 (10%) Query: 1 MKQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 + K Q +L + E + + Q+ + E + K+ L Sbjct: 847 LAYLEKIQADLAESNGNASEERIKLLAGLTRLRQICCDPSLFVEN---YQGESGKLLQLF 903 Query: 61 VIIEKA--NAAPIIVAYHFNSDLARLQKAFPQ---------GRTLDKDPCT-IQEWNEGK 108 I+ A N +++ F LA +++ + G+T K + +NEG+ Sbjct: 904 DTIQTARENGKRLLIFSQFTGMLAIIRRKLEEDGQTFFYMDGKTPAKTRLDMVNSFNEGE 963 Query: 109 IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVY 168 + + G GLNL G + ++ + LWW+ +Q R + G KR V V+ Sbjct: 964 NDIFLISLKAGGTGLNL-VGADTVILYDLWWNPAVEEQATGR-----AHRIGQKRVVQVF 1017 Query: 169 YLIAQNTIDELVLQRLRTKSTIQDLLLN 196 +I + TI+E + + + K + D L+ Sbjct: 1018 RMITKGTIEERIFELQKKKQALVDELIQ 1045 >gi|307609532|emb|CBW99030.1| hypothetical protein LPW_08151 [Legionella pneumophila 130b] Length = 1088 Score = 139 bits (350), Expect = 2e-31, Method: Composition-based stats. Identities = 33/164 (20%), Positives = 67/164 (40%), Gaps = 18/164 (10%) Query: 44 EEKHWKEVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQKAF---------PQGR 92 E K+ AL +++ ++V F S L +++ G+ Sbjct: 911 SEAEIAHGTSCKLDALMELLDNLVEEGRRVLVFSQFTSMLKLIEELLIARQYDYLKLTGQ 970 Query: 93 TLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIG 152 T ++ ++++ +G P+ + G GLNL + ++ + WW+ Q +R Sbjct: 971 TQNRQ-ALVEQFQQGDTPIFLISLKAGGTGLNLTR-ADTVIHYDPWWNPSVEDQATDR-- 1026 Query: 153 VTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + G + VFVY LI T++E +L K + + +L+ Sbjct: 1027 ---THRIGQESPVFVYKLITSGTVEEAILGMQEKKRQLVEGILS 1067 >gi|296106323|ref|YP_003618023.1| DNA helicase, SNF2/RAD54 family domain protein [Legionella pneumophila 2300/99 Alcoy] gi|295648224|gb|ADG24071.1| DNA helicase, SNF2/RAD54 family domain protein [Legionella pneumophila 2300/99 Alcoy] Length = 1088 Score = 139 bits (350), Expect = 2e-31, Method: Composition-based stats. Identities = 33/164 (20%), Positives = 67/164 (40%), Gaps = 18/164 (10%) Query: 44 EEKHWKEVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQKAF---------PQGR 92 E K+ AL +++ ++V F S L +++ G+ Sbjct: 911 SEAEIAHGTSCKLDALMELLDNLVEEGRRVLVFSQFTSMLKLIEELLIARQYDYLKLTGQ 970 Query: 93 TLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIG 152 T ++ ++++ +G P+ + G GLNL + ++ + WW+ Q +R Sbjct: 971 TQNRQ-ALVEQFQQGDTPIFLISLKAGGTGLNLTR-ADTVIHYDPWWNPSVEDQATDR-- 1026 Query: 153 VTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + G + VFVY LI T++E +L K + + +L+ Sbjct: 1027 ---THRIGQESPVFVYKLITSGTVEEAILGMQEKKRQLVEGILS 1067 >gi|52840972|ref|YP_094771.1| DNA helicase SNF2/RAD54 family protein [Legionella pneumophila subsp. pneumophila str. Philadelphia 1] gi|54296762|ref|YP_123131.1| hypothetical protein lpp0801 [Legionella pneumophila str. Paris] gi|52628083|gb|AAU26824.1| DNA helicase, SNF2/RAD54 family domain protein [Legionella pneumophila subsp. pneumophila str. Philadelphia 1] gi|53750547|emb|CAH11949.1| hypothetical protein lpp0801 [Legionella pneumophila str. Paris] Length = 1088 Score = 139 bits (350), Expect = 2e-31, Method: Composition-based stats. Identities = 33/164 (20%), Positives = 66/164 (40%), Gaps = 18/164 (10%) Query: 44 EEKHWKEVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQKAF---------PQGR 92 E K+ AL +++ ++V F S L +++ G+ Sbjct: 911 SEAEIAHGTSCKLDALMELLDNLVEEGRRVLVFSQFTSMLKLIEELLIVRQYDYLKLTGQ 970 Query: 93 TLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIG 152 T ++ + ++ +G P+ + G GLNL + ++ + WW+ Q +R Sbjct: 971 TQNRQ-ALVDQFQQGDTPIFLISLKAGGTGLNLTR-ADTVIHYDPWWNPSVEDQATDR-- 1026 Query: 153 VTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + G + VFVY LI T++E +L K + + +L+ Sbjct: 1027 ---THRIGQESPVFVYKLITSGTVEEAILGMQEKKRQLVEGILS 1067 >gi|47096999|ref|ZP_00234573.1| helicase, Snf2 family [Listeria monocytogenes str. 1/2a F6854] gi|254898188|ref|ZP_05258112.1| hypothetical protein LmonJ_00195 [Listeria monocytogenes J0161] gi|254912319|ref|ZP_05262331.1| helicase [Listeria monocytogenes J2818] gi|254936646|ref|ZP_05268343.1| helicase [Listeria monocytogenes F6900] gi|47014621|gb|EAL05580.1| helicase, Snf2 family [Listeria monocytogenes str. 1/2a F6854] gi|258609243|gb|EEW21851.1| helicase [Listeria monocytogenes F6900] gi|293590301|gb|EFF98635.1| helicase [Listeria monocytogenes J2818] Length = 1072 Score = 139 bits (350), Expect = 2e-31, Method: Composition-based stats. Identities = 43/208 (20%), Positives = 80/208 (38%), Gaps = 21/208 (10%) Query: 1 MKQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 + K Q +L E + + Q+ + E + K+ L Sbjct: 847 LAYLEKIQADLEASNGNAGEERIKLLAGLTRLRQICCDPSLFVEN---YQGESGKLLQLF 903 Query: 61 VIIEKA--NAAPIIVAYHFNSDLARLQKAFPQ---------GRTLDKDPCT-IQEWNEGK 108 I+ A N I++ F L +++ + G+T K + +NEG+ Sbjct: 904 DTIQTARENGKRILLFSQFTGMLGIIRQKLEEEGQPLFYMDGKTPSKTRLDMVNAFNEGE 963 Query: 109 IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVY 168 + + G GLNL G + ++ + LWW+ +Q R + G KR V V+ Sbjct: 964 NDIFLISLKAGGTGLNL-VGADTVILYDLWWNPAVEEQATGR-----AHRIGQKRVVQVF 1017 Query: 169 YLIAQNTIDELVLQRLRTKSTIQDLLLN 196 +I + TI+E + + + K + D L+ Sbjct: 1018 RMITKGTIEERIFELQKKKQALVDELIQ 1045 >gi|294499255|ref|YP_003562955.1| SNF2 helicase family protein [Bacillus megaterium QM B1551] gi|294349192|gb|ADE69521.1| SNF2 helicase family protein [Bacillus megaterium QM B1551] Length = 1068 Score = 139 bits (350), Expect = 2e-31, Method: Composition-based stats. Identities = 38/183 (20%), Positives = 73/183 (39%), Gaps = 21/183 (11%) Query: 26 ASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLAR 83 + + Q+ + E E + K++ L I A N +++ F S L Sbjct: 875 LAGLTRLRQICCHPSLFVEN---YEGYSSKLEQLLEITRSAVANGKRLLIFSQFTSMLHI 931 Query: 84 LQKAFPQ---------GRTLDKDP-CTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILV 133 +++ + G+T K+ +N G+ + + G GLNL G + ++ Sbjct: 932 IREELQKDNLSYFYLDGQTPSKERVEMADRFNNGEQDIFLISLKAGGTGLNLT-GADTVI 990 Query: 134 FFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDL 193 + LWW+ +Q R + G K V V LI+Q TI+E + + K + + Sbjct: 991 LYDLWWNPAIEEQAAGR-----AHRIGQKNVVQVIKLISQGTIEEKIYGLQQKKKELIEQ 1045 Query: 194 LLN 196 ++ Sbjct: 1046 VIQ 1048 >gi|291563034|emb|CBL41850.1| Superfamily II DNA/RNA helicases, SNF2 family [butyrate-producing bacterium SS3/4] Length = 1068 Score = 139 bits (350), Expect = 2e-31, Method: Composition-based stats. Identities = 30/182 (16%), Positives = 70/182 (38%), Gaps = 21/182 (11%) Query: 26 ASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVII--EKANAAPIIVAYHFNSDLAR 83 ++ ++ Q+ + + K+ ++ + I++ F S L Sbjct: 873 LAELMRLRQICCEPSLCFDG---YKGGSAKLDTCMELLLNGTSAGHKILLFSQFTSMLEI 929 Query: 84 LQKAFPQ---------GRTLDKDP-CTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILV 133 + K + G T +D + + + + + G GLNL ++++ Sbjct: 930 IAKRLKKEKIPFYLLTGSTPKRDRVQMASSFQKDDVMVFLISLKAGGTGLNLT-AADVVI 988 Query: 134 FFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDL 193 + WW++ Q +R + G + V V+ LI ++TI+E +L+ K + D Sbjct: 989 HYDPWWNVAAQNQATDR-----AHRIGQENQVSVFKLITKHTIEENILKLQEMKRDLADT 1043 Query: 194 LL 195 ++ Sbjct: 1044 VV 1045 >gi|304315749|ref|YP_003850894.1| SNF2-related protein [Thermoanaerobacterium thermosaccharolyticum DSM 571] gi|302777251|gb|ADL67810.1| SNF2-related protein [Thermoanaerobacterium thermosaccharolyticum DSM 571] Length = 1065 Score = 139 bits (350), Expect = 2e-31, Method: Composition-based stats. Identities = 32/182 (17%), Positives = 69/182 (37%), Gaps = 21/182 (11%) Query: 27 SKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKAN--AAPIIVAYHFNSDLARL 84 + + Q+ + E + K++ L +I++ ++ F + L + Sbjct: 873 TALTRLRQICCHPSMFVEN---YKGTSGKMELLMELIQELKESGHRALIFSQFTTALKLI 929 Query: 85 QKAFPQGRT----------LDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVF 134 + + + + ++ +NEG + + G GLNL G + ++ Sbjct: 930 EDNLKKEKISYLYLDGDTKTKERGELVKAFNEGDSDVFLISLKAGGTGLNL-VGADTVIH 988 Query: 135 FSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 F WW+ Q +R + G V V LI Q TI+E +++ K + + + Sbjct: 989 FDPWWNPAIEDQATDR-----AHRIGQVNTVQVIKLITQGTIEEKIVKLQERKKEMINSV 1043 Query: 195 LN 196 +N Sbjct: 1044 IN 1045 >gi|54293719|ref|YP_126134.1| hypothetical protein lpl0772 [Legionella pneumophila str. Lens] gi|53753551|emb|CAH15006.1| hypothetical protein lpl0772 [Legionella pneumophila str. Lens] Length = 1088 Score = 139 bits (350), Expect = 2e-31, Method: Composition-based stats. Identities = 33/164 (20%), Positives = 66/164 (40%), Gaps = 18/164 (10%) Query: 44 EEKHWKEVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQKAF---------PQGR 92 E K+ AL +++ ++V F S L +++ G+ Sbjct: 911 SEAEIAHGTSCKLDALMELLDNLVEEGRRVLVFSQFTSMLKLIEELLIVRQYDYLKLTGQ 970 Query: 93 TLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIG 152 T ++ + ++ +G P+ + G GLNL + ++ + WW+ Q +R Sbjct: 971 TQNRQ-ALVDQFQQGDTPIFLISLKAGGTGLNLTR-ADTVIHYDPWWNPSVEDQATDR-- 1026 Query: 153 VTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + G + VFVY LI T++E +L K + + +L+ Sbjct: 1027 ---THRIGQESPVFVYKLITSGTVEEAILGMQEKKRQLVEGILS 1067 >gi|254832046|ref|ZP_05236701.1| hypothetical protein Lmon1_11855 [Listeria monocytogenes 10403S] Length = 1072 Score = 139 bits (350), Expect = 2e-31, Method: Composition-based stats. Identities = 43/208 (20%), Positives = 80/208 (38%), Gaps = 21/208 (10%) Query: 1 MKQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 + K Q +L E + + Q+ + E + K+ L Sbjct: 847 LAYLEKIQADLEASNGNAGEERIKLLAGLTRLRQICCDPSLFVEN---YQGESGKLLQLF 903 Query: 61 VIIEKA--NAAPIIVAYHFNSDLARLQKAFPQ---------GRTLDKDPCT-IQEWNEGK 108 I+ A N I++ F L +++ + G+T K + +NEG+ Sbjct: 904 DTIQTARENGKRILLFSQFTGMLGIIRQKLEEEGQPLFYMDGKTPSKTRLDMVNAFNEGE 963 Query: 109 IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVY 168 + + G GLNL G + ++ + LWW+ +Q R + G KR V V+ Sbjct: 964 NDIFLISLKAGGTGLNL-VGADTVILYDLWWNPAVEEQATGR-----AHRIGQKRVVQVF 1017 Query: 169 YLIAQNTIDELVLQRLRTKSTIQDLLLN 196 +I + TI+E + + + K + D L+ Sbjct: 1018 RMITKGTIEERIFELQKKKQALVDELIQ 1045 >gi|159028978|emb|CAO87439.1| unnamed protein product [Microcystis aeruginosa PCC 7806] Length = 1390 Score = 139 bits (350), Expect = 2e-31, Method: Composition-based stats. Identities = 37/210 (17%), Positives = 75/210 (35%), Gaps = 25/210 (11%) Query: 4 YHKFQRELYCDLQGENIEA----FNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKAL 59 Y +R L + A ++ +K + + ++ K+ Sbjct: 1171 YEALRRRALEKLSESDSTAGAKHLQVLAEIMKLRRACCHPQLVAPD---LDLAGSKLSRF 1227 Query: 60 EVIIEKA--NAAPIIVAYHFNSDLARLQKAFPQGRTLDK----------DPCTIQEWNEG 107 I+++ N +V F LA ++ Q + + ++ + G Sbjct: 1228 AEILDELLDNQHKALVFSQFVDHLAIVRSYLDQRQIKYQYLDGSTPASDRQKQVKAFQAG 1287 Query: 108 KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFV 167 + + + G GLNL + ++ WW+ Q +R + G KR V + Sbjct: 1288 EGDVFLISLKAGGTGLNLT-AADYVIHLDPWWNPAVEDQASDR-----AHRIGQKRPVTI 1341 Query: 168 YYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 Y L+A++TI+E ++ K + D LL Sbjct: 1342 YRLVAKDTIEEKIVDLHHHKRDLADSLLEG 1371 >gi|284802036|ref|YP_003413901.1| hypothetical protein LM5578_1791 [Listeria monocytogenes 08-5578] gi|284995178|ref|YP_003416946.1| hypothetical protein LM5923_1743 [Listeria monocytogenes 08-5923] gi|284057598|gb|ADB68539.1| hypothetical protein LM5578_1791 [Listeria monocytogenes 08-5578] gi|284060645|gb|ADB71584.1| hypothetical protein LM5923_1743 [Listeria monocytogenes 08-5923] Length = 1072 Score = 139 bits (350), Expect = 2e-31, Method: Composition-based stats. Identities = 43/208 (20%), Positives = 80/208 (38%), Gaps = 21/208 (10%) Query: 1 MKQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 + K Q +L E + + Q+ + E + K+ L Sbjct: 847 LAYLEKIQADLEASNGNAGEERIKLLAGLTRLRQICCDPSLFVEN---YQGESGKLLQLF 903 Query: 61 VIIEKA--NAAPIIVAYHFNSDLARLQKAFPQ---------GRTLDKDPCT-IQEWNEGK 108 I+ A N I++ F L +++ + G+T K + +NEG+ Sbjct: 904 DTIQTARENGKRILLFSQFTGMLGIIRQKLEEEGQPLFYMDGKTPSKTRLDMVNAFNEGE 963 Query: 109 IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVY 168 + + G GLNL G + ++ + LWW+ +Q R + G KR V V+ Sbjct: 964 NDIFLISLKAGGTGLNL-VGADTVILYDLWWNPAVEEQATGR-----AHRIGQKRVVQVF 1017 Query: 169 YLIAQNTIDELVLQRLRTKSTIQDLLLN 196 +I + TI+E + + + K + D L+ Sbjct: 1018 RMITKGTIEERIFELQKKKQALVDELIQ 1045 >gi|16803684|ref|NP_465169.1| hypothetical protein lmo1644 [Listeria monocytogenes EGD-e] gi|16411080|emb|CAC99722.1| lmo1644 [Listeria monocytogenes EGD-e] Length = 1072 Score = 139 bits (350), Expect = 2e-31, Method: Composition-based stats. Identities = 43/208 (20%), Positives = 80/208 (38%), Gaps = 21/208 (10%) Query: 1 MKQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 + K Q +L E + + Q+ + E + K+ L Sbjct: 847 LAYLEKIQADLEASNGNAGEERIKLLAGLTRLRQICCDPSLFVEN---YQGESGKLLQLF 903 Query: 61 VIIEKA--NAAPIIVAYHFNSDLARLQKAFPQ---------GRTLDKDPCT-IQEWNEGK 108 I+ A N I++ F L +++ + G+T K + +NEG+ Sbjct: 904 DTIQTARENGKRILLFSQFTGMLGIIRQKLEEEGQPLFYMDGKTPSKTRLDMVNAFNEGE 963 Query: 109 IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVY 168 + + G GLNL G + ++ + LWW+ +Q R + G KR V V+ Sbjct: 964 NDIFLISLKAGGTGLNL-VGADTVILYDLWWNPAVEEQATGR-----AHRIGQKRVVQVF 1017 Query: 169 YLIAQNTIDELVLQRLRTKSTIQDLLLN 196 +I + TI+E + + + K + D L+ Sbjct: 1018 RMITKGTIEERIFELQKKKQALVDELIQ 1045 >gi|262377834|ref|ZP_06071049.1| predicted protein [Acinetobacter lwoffii SH145] gi|262307224|gb|EEY88372.1| predicted protein [Acinetobacter lwoffii SH145] Length = 1115 Score = 139 bits (350), Expect = 3e-31, Method: Composition-based stats. Identities = 38/213 (17%), Positives = 80/213 (37%), Gaps = 25/213 (11%) Query: 2 KQYHKFQRELYCDLQGENIEA------FNSASKTVKCLQLANGAVYYD-EEKHWKEVHDE 54 K Y + + ++Q E +K Q+ + + + Sbjct: 889 KLYEAVRATMQANIQKIVAEKGFKRSQIQILDALLKLRQVCCHPSLLKLDSVKTGQAYSA 948 Query: 55 KIKALEVIIEKA--NAAPIIVAYHFNSDLARLQKAF---------PQGRTLDKDPCTIQE 103 K++ L ++ I++ F S L +++ G+T +D I Sbjct: 949 KLEQLMDMVVPMVEEGRKILIFSQFTSMLELIEQQLYHAEIGYVKLTGKTKKRDE-VITA 1007 Query: 104 WNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKR 163 + G++P+ + G GLNL + ++ + WW+ Q +R + G + Sbjct: 1008 FQSGQVPVFLISLKAGGVGLNLT-AADTVIHYDPWWNPAAEDQASDRAW-----RIGQDK 1061 Query: 164 AVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 VFVY LI +I+E ++ + K+ + +L+ Sbjct: 1062 PVFVYKLITNKSIEEKIIALQQNKAELAQSILS 1094 >gi|158341292|ref|YP_001522344.1| SNF2 family helicase [Acaryochloris marina MBIC11017] gi|158311533|gb|ABW33144.1| helicase, SNF2 family [Acaryochloris marina MBIC11017] Length = 1406 Score = 139 bits (350), Expect = 3e-31, Method: Composition-based stats. Identities = 31/213 (14%), Positives = 74/213 (34%), Gaps = 25/213 (11%) Query: 1 MKQYHKFQRELYCDLQGENIEA----FNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKI 56 + Y +++ L + + ++ ++ + E + K+ Sbjct: 1184 LAFYEALRQDALAKLNESDAASGPKHIQVLAELMRLRRACCNPRLVLPETD---LPSAKL 1240 Query: 57 KALEVIIEKA--NAAPIIVAYHFNSDLARLQKAFPQGRT----------LDKDPCTIQEW 104 + ++ + N +V F L +++ + + + + Sbjct: 1241 QLFAEVLNELLDNKHKALVFSQFVDHLEIIRRYLDEQQIQYQYLDGSTPAKNRHKRVDAF 1300 Query: 105 NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA 164 G+ + + G GLNL + ++ WW+ Q +R + G +R Sbjct: 1301 QAGEGEIFLISLKAGGTGLNLT-AADYVIHMDPWWNPAVEDQASDR-----AHRIGQQRP 1354 Query: 165 VFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 V +Y L+A+ TI+E +++ K + D LL Sbjct: 1355 VTIYRLVAKGTIEEKIVELHNQKRDLADSLLEG 1387 >gi|327183628|gb|AEA32075.1| Non-specific serine/threonine protein kinase [Lactobacillus amylovorus GRL 1118] Length = 1179 Score = 139 bits (350), Expect = 3e-31, Method: Composition-based stats. Identities = 44/212 (20%), Positives = 90/212 (42%), Gaps = 27/212 (12%) Query: 3 QYHKFQRELYCDLQGENIE-----AFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIK 57 YH ++ L G++ + F ++ K ++ + H K +K+K Sbjct: 958 LYHLQMNKIIAQLNGQDDDDFKKFRFQILAQITKLREICCDPHLLYDNYHGK---SDKLK 1014 Query: 58 ALEVIIEKA--NAAPIIVAYHFNSDLARLQKAFPQGRT----------LDKDPCTIQEWN 105 A +I+ N I++ F S L LQ+ + + +K IQ +N Sbjct: 1015 ATIDLIKSNLENGHKILLFSQFTSMLDILQEKLAKLKVPTFMLTGSTPKEKRQEDIQHFN 1074 Query: 106 EGKIP-LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA 164 K P + + G G+NL ++++ + WW++ Q +R + G K + Sbjct: 1075 SLKQPGVFLISLKAGGTGINLT-SADVVIHYDPWWNIAAENQATDR-----AHRIGQKNS 1128 Query: 165 VFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 V +Y ++ Q+TI+E +++ + K+ + +LN Sbjct: 1129 VKIYKMVTQDTIEERIIKLQQKKAELAQAILN 1160 >gi|315650300|ref|ZP_07903372.1| conserved hypothetical protein [Eubacterium saburreum DSM 3986] gi|315487411|gb|EFU77721.1| conserved hypothetical protein [Eubacterium saburreum DSM 3986] Length = 449 Score = 139 bits (350), Expect = 3e-31, Method: Composition-based stats. Identities = 38/209 (18%), Positives = 86/209 (41%), Gaps = 21/209 (10%) Query: 3 QYHKFQRELYCDLQGE-NIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEV 61 Y K +RE + +L G + +K ++ Q G + D + + V K+ ALE Sbjct: 241 IYSKIKRESFAELDGGGKVTVTTVLTKLLRLQQFTGGFLVADGSEKAELVSKGKLNALEE 300 Query: 62 IIEK---ANAAPIIVAYHFNSDLARLQKAFPQGRT----------LDKDPCTIQEWNEGK 108 II+ +++ F ++ + + + + L+ ++++ + Sbjct: 301 IIDDYVVDADKKLVIFARFRPEIDLIGQMLTKKKIKYGAIYGDVKLEDRGGIVKDFQTNE 360 Query: 109 -IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFV 167 + A + G G+ L + V++S+ ++ + Q + RI + G K Sbjct: 361 NTKVFLAQIDTAGLGITLT-AADTCVYYSVNFNYAAYTQSLARI-----HRIGQKNICTY 414 Query: 168 YYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 +LI + T+DE +L+ L K + +++ Sbjct: 415 IHLITEGTVDETILKALARKEDLAKTIVD 443 >gi|300743764|ref|ZP_07072784.1| SNF2/helicase domain protein [Rothia dentocariosa M567] gi|300380125|gb|EFJ76688.1| SNF2/helicase domain protein [Rothia dentocariosa M567] Length = 1318 Score = 139 bits (350), Expect = 3e-31, Method: Composition-based stats. Identities = 45/206 (21%), Positives = 86/206 (41%), Gaps = 26/206 (12%) Query: 6 KFQRELYC----DLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEV 61 + +R+ D+ F S + +LA A D + + V K++ L Sbjct: 1101 QRERQKVLGLLEDMDKNRFTIFQSLTL---LRRLALDATLIDPD-EYAGVASAKLEYLVE 1156 Query: 62 IIEKA--NAAPIIVAYHFNSDLARLQKA---------FPQGRTLDKDPCTIQEWNEGKIP 110 + + ++V F L + + + G T ++ P ++++ EG P Sbjct: 1157 HLPSLLGDGHRVLVFSQFTGYLRTIAERLQAEGIDYLYLDGTTRNR-PQVLKDFAEGTAP 1215 Query: 111 LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYL 170 + + G GLNL + + WW+ QQ ++RI + G +R V VY L Sbjct: 1216 VFLISLKAGGFGLNLTEADHCFIM-DPWWNPAAEQQAVDRI-----HRLGQERDVHVYRL 1269 Query: 171 IAQNTIDELVLQRLRTKSTIQDLLLN 196 +A+ TI+E V+ +K+ + D ++N Sbjct: 1270 VAEGTIEEKVMDLKASKAALFDAVVN 1295 >gi|15896547|ref|NP_349896.1| SNF2 family DNA/RNA helicase [Clostridium acetobutylicum ATCC 824] gi|15026382|gb|AAK81236.1|AE007827_4 Superfamily II DNA/RNA helicases, SNF2 family [Clostridium acetobutylicum ATCC 824] gi|325510706|gb|ADZ22342.1| Superfamily II DNA/RNA helicase, SNF2 family [Clostridium acetobutylicum EA 2018] Length = 1077 Score = 139 bits (350), Expect = 3e-31, Method: Composition-based stats. Identities = 42/194 (21%), Positives = 81/194 (41%), Gaps = 23/194 (11%) Query: 4 YHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVII 63 Y R++ D + ++K ++L N ++ +E H V + L+ I Sbjct: 884 YITRLRQICLDPSVVMEDYTGGSAKINALIELLNHSI---DEGHKILVFSQFTSVLKNIA 940 Query: 64 EKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDP-CTIQEWNEGKIPLLFAHPASCGHG 122 E F +++ ++ G K+ +Q++NEG + + G G Sbjct: 941 E-----------RFR--EEKIKYSYLDGSINSKNRMNMVQDFNEGNNSVFLISLKAGGTG 987 Query: 123 LNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQ 182 LNL ++++ F WW+ +Q +R + G K V V L+A+ TI+E +++ Sbjct: 988 LNLT-SADVVIHFDPWWNPAVEEQATDR-----AHRIGQKNIVEVIKLVAKGTIEEKIIR 1041 Query: 183 RLRTKSTIQDLLLN 196 K + D LL+ Sbjct: 1042 LQEEKKRLVDSLLS 1055 >gi|226943215|ref|YP_002798288.1| helicase protein [Azotobacter vinelandii DJ] gi|226718142|gb|ACO77313.1| helicase protein [Azotobacter vinelandii DJ] Length = 872 Score = 138 bits (349), Expect = 3e-31, Method: Composition-based stats. Identities = 35/160 (21%), Positives = 68/160 (42%), Gaps = 18/160 (11%) Query: 49 KEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFP---------QGRTLDKD 97 + K+ AL ++E+ A +++ F L + + G T D+ Sbjct: 699 QAADSAKLSALLPMLEELSAEGRRVLLFSQFTGMLELIARELEARKIPYVQLTGATRDRR 758 Query: 98 PCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 ++E+ G++P+ + G GLNL + ++ F WW+ Q +R Sbjct: 759 -TPVEEFQAGRVPVFLISLKAGGAGLNLT-AADTVIHFDPWWNPAAEAQASDR-----AY 811 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + G + VFVY LIA+ +++E + + K+ + LL Sbjct: 812 RIGQDKPVFVYRLIARGSVEEKIQHLQKAKAELAHGLLEG 851 >gi|313608461|gb|EFR84385.1| SNF2 family helicase [Listeria monocytogenes FSL F2-208] Length = 966 Score = 138 bits (349), Expect = 3e-31, Method: Composition-based stats. Identities = 43/208 (20%), Positives = 79/208 (37%), Gaps = 21/208 (10%) Query: 1 MKQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 + K Q +L E + + Q+ + E + K+ L Sbjct: 741 LAYLEKIQADLEASNGNAGEERIKLLAGLTRLRQICCDPSLFVEN---YQGESGKLLQLF 797 Query: 61 VIIEKA--NAAPIIVAYHFNSDLARLQKAFPQ---------GRTLDKDPCT-IQEWNEGK 108 I+ A N I++ F L +++ + G+T K + +NEG+ Sbjct: 798 DTIQTARENGKRILLFSQFTGMLGIIRQKLEEEGQPLFYMDGKTPSKTRLDMVNAFNEGE 857 Query: 109 IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVY 168 + + G GLNL G + ++ + LWW+ +Q R + G KR V V+ Sbjct: 858 NDIFLISLKAGGTGLNL-VGADTVILYDLWWNPAVEEQATGR-----AHRIGQKRVVQVF 911 Query: 169 YLIAQNTIDELVLQRLRTKSTIQDLLLN 196 +I + TI+E + + K + D L+ Sbjct: 912 RMITKGTIEERIFDLQKKKQALVDELIQ 939 >gi|47093680|ref|ZP_00231434.1| helicase, Snf2 family [Listeria monocytogenes str. 4b H7858] gi|47017941|gb|EAL08720.1| helicase, Snf2 family [Listeria monocytogenes str. 4b H7858] gi|328465005|gb|EGF36284.1| SNF2 family helicase [Listeria monocytogenes 1816] Length = 1072 Score = 138 bits (349), Expect = 3e-31, Method: Composition-based stats. Identities = 43/208 (20%), Positives = 80/208 (38%), Gaps = 21/208 (10%) Query: 1 MKQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 + K Q +L + E + + Q+ + E + K+ L Sbjct: 847 LAYLEKIQADLEASNGNASEERIKLLAGLTRLRQICCDPSLFVEN---YQGESGKLLQLF 903 Query: 61 VIIEKA--NAAPIIVAYHFNSDLARLQKAFPQ---------GRTLDKDPCT-IQEWNEGK 108 I+ A N I++ F L +++ + G+T K + +NEG+ Sbjct: 904 DTIQTARENGKRILLFSQFTGMLGIIRQKLEEDGQTLFYMDGKTPSKTRLDMVNAFNEGE 963 Query: 109 IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVY 168 + + G GLNL G + ++ + LWW+ +Q R + G KR V V+ Sbjct: 964 NDIFLISLKAGGTGLNL-VGADTVILYDLWWNPAVEEQATGR-----AHRIGQKRVVQVF 1017 Query: 169 YLIAQNTIDELVLQRLRTKSTIQDLLLN 196 +I + TI+E + + K + D L+ Sbjct: 1018 RMITKGTIEERIFDLQKKKQALVDELIQ 1045 >gi|323705524|ref|ZP_08117098.1| SNF2-related protein [Thermoanaerobacterium xylanolyticum LX-11] gi|323535001|gb|EGB24778.1| SNF2-related protein [Thermoanaerobacterium xylanolyticum LX-11] Length = 1065 Score = 138 bits (349), Expect = 3e-31, Method: Composition-based stats. Identities = 31/182 (17%), Positives = 69/182 (37%), Gaps = 21/182 (11%) Query: 27 SKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKAN--AAPIIVAYHFNSDLARL 84 + + Q+ + E + K++ L +I++ ++ F + L + Sbjct: 873 TALTRLRQICCHPSMFVEN---YKGTSGKMELLMELIQELKESGHRALIFSQFTTALKLI 929 Query: 85 QKAFPQGRT----------LDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVF 134 + + + + ++ +N+G + + G GLNL G + ++ Sbjct: 930 EDNLKKEKISYLYLDGDTKTKERGELVKAFNKGDSDVFLISLKAGGTGLNL-IGADTVIH 988 Query: 135 FSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 F WW+ Q +R + G V V LI Q TI+E +++ K + + + Sbjct: 989 FDPWWNPAIEDQATDR-----AHRIGQVNTVQVIKLITQGTIEEKIVKLQEKKKEMINSV 1043 Query: 195 LN 196 +N Sbjct: 1044 IN 1045 >gi|309388673|gb|ADO76553.1| SNF2-related protein [Halanaerobium praevalens DSM 2228] Length = 1082 Score = 138 bits (349), Expect = 3e-31, Method: Composition-based stats. Identities = 39/184 (21%), Positives = 72/184 (39%), Gaps = 18/184 (9%) Query: 24 NSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDL 81 N + K Q+ N + + K++AL+ ++ A IIV F L Sbjct: 881 NILAALTKLRQICNHPALI-LGEKASTYNSGKLEALKELLADALSGGHKIIVFSQFVKML 939 Query: 82 ARLQKAFPQ---------GRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNIL 132 ++ Q G T + + N ++ + + G GLNL +++ Sbjct: 940 KLIRSELDQQGLNYLYLDGSTRKRMQKVKEFNNNCEVKIFLISLKAGGVGLNLT-AADMV 998 Query: 133 VFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQD 192 V WW+ M+ER R + G + V VY LI + T++E +L+ K + + Sbjct: 999 VHVDPWWN-----PMVERQATDRAHRLGQQNRVMVYKLITRGTVEEKMLKLQERKQDLFN 1053 Query: 193 LLLN 196 ++ Sbjct: 1054 NVIE 1057 >gi|237733335|ref|ZP_04563816.1| SWF/SNF family helicase [Mollicutes bacterium D7] gi|229383547|gb|EEO33638.1| SWF/SNF family helicase [Coprobacillus sp. D7] Length = 1068 Score = 138 bits (349), Expect = 4e-31, Method: Composition-based stats. Identities = 45/204 (22%), Positives = 79/204 (38%), Gaps = 23/204 (11%) Query: 6 KFQRELYCDLQGENIEAFNSASKTVKCLQLANGA-VYYDEEKHWKEVHDEKIKALEVIIE 64 + EL L E I+ + + Q+ A + Y+E K+KA II+ Sbjct: 851 QINSELKTALDVERIDKIQILAMMTRLRQICCDARILYNE----IIGPSSKMKACLDIIK 906 Query: 65 KA--NAAPIIVAYHFNSDLARLQKAFPQGRTLD----------KDPCTIQEWNEGKIPLL 112 KA N +++ F S L L+K + L K + + + Sbjct: 907 KAKENNQKVLLFSSFTSSLDLLEKELRKEDILYYVLTGATNKIKRHQLVNAFQNDNTDVF 966 Query: 113 FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIA 172 + G GLNL +I++ F WW++ Q +R + G V VY LI Sbjct: 967 LISLKAGGTGLNLT-AASIVIHFDPWWNMSAQNQATDR-----AYRIGQTNNVQVYKLIM 1020 Query: 173 QNTIDELVLQRLRTKSTIQDLLLN 196 +N+I+E + + K + ++ + Sbjct: 1021 KNSIEEKIQELQAQKQDLSNIFIE 1044 >gi|291449545|ref|ZP_06588935.1| SNF2/RAD54 family helicase [Streptomyces roseosporus NRRL 15998] gi|291352492|gb|EFE79396.1| SNF2/RAD54 family helicase [Streptomyces roseosporus NRRL 15998] Length = 946 Score = 138 bits (349), Expect = 4e-31, Method: Composition-based stats. Identities = 46/216 (21%), Positives = 85/216 (39%), Gaps = 27/216 (12%) Query: 3 QYHKFQRELYCDLQGENIEAFNSASKTVKCL----QLANG-AVYYDEEKHWKEVHDEKIK 57 Y RE ++ + F +K L Q+ N A + EE+ K++ Sbjct: 719 LYEAVVRETLAEISA--ADGFERRGLVMKLLTSLKQICNHPAQFLKEEQPRIADRSGKVE 776 Query: 58 ALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTLD-----------KDPCTIQEW 104 L+ +++ A ++V + ARL + R +D + + + Sbjct: 777 LLDELLDTILAERGSVLVFTQYVQM-ARLLEEHLAARGVDTQFLHGGTPVARREEMVARF 835 Query: 105 NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA 164 G+ P+ + G GLNL G+ +V F WW+ Q +R + G + Sbjct: 836 QSGEAPVFLLSLKAAGTGLNLTRAGH-VVHFDRWWNPAVEAQATDR-----AYRIGQTQP 889 Query: 165 VFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKK 200 V V+ LIA+ TI++ + L K + D +L + + Sbjct: 890 VQVHRLIAEGTIEDRIAGMLARKQGLADAVLGSGEA 925 >gi|226224245|ref|YP_002758352.1| SNF2-type helicase [Listeria monocytogenes Clip81459] gi|225876707|emb|CAS05416.1| Putative SNF2-type helicase [Listeria monocytogenes serotype 4b str. CLIP 80459] Length = 1072 Score = 138 bits (349), Expect = 4e-31, Method: Composition-based stats. Identities = 43/208 (20%), Positives = 80/208 (38%), Gaps = 21/208 (10%) Query: 1 MKQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 + K Q +L + E + + Q+ + E + K+ L Sbjct: 847 LAYLEKIQADLEASNGNASEERIKLLAGLTRLRQICCDPSLFVEN---YQGESGKLLQLF 903 Query: 61 VIIEKA--NAAPIIVAYHFNSDLARLQKAFPQ---------GRTLDKDPCT-IQEWNEGK 108 I+ A N I++ F L +++ + G+T K + +NEG+ Sbjct: 904 DTIQTARENGKRILLFSQFTGMLGIIRQKLEEDGQTLFYMDGKTPSKTRLDMVNAFNEGE 963 Query: 109 IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVY 168 + + G GLNL G + ++ + LWW+ +Q R + G KR V V+ Sbjct: 964 NDIFLISLKAGGTGLNL-VGADTVILYDLWWNPAVEEQATGR-----AHRIGQKRVVQVF 1017 Query: 169 YLIAQNTIDELVLQRLRTKSTIQDLLLN 196 +I + TI+E + + K + D L+ Sbjct: 1018 RMITKGTIEERIFDLQKKKQALVDELIQ 1045 >gi|46907873|ref|YP_014262.1| SNF2 family helicase [Listeria monocytogenes str. 4b F2365] gi|254931583|ref|ZP_05264942.1| helicase [Listeria monocytogenes HPB2262] gi|46881142|gb|AAT04439.1| helicase, Snf2 family [Listeria monocytogenes serotype 4b str. F2365] gi|293583138|gb|EFF95170.1| helicase [Listeria monocytogenes HPB2262] Length = 1072 Score = 138 bits (349), Expect = 4e-31, Method: Composition-based stats. Identities = 43/208 (20%), Positives = 80/208 (38%), Gaps = 21/208 (10%) Query: 1 MKQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 + K Q +L + E + + Q+ + E + K+ L Sbjct: 847 LAYLEKIQADLEASNGNASEERIKLLAGLTRLRQICCDPSLFVEN---YQGESGKLLQLF 903 Query: 61 VIIEKA--NAAPIIVAYHFNSDLARLQKAFPQ---------GRTLDKDPCT-IQEWNEGK 108 I+ A N I++ F L +++ + G+T K + +NEG+ Sbjct: 904 DTIQTARENGKRILLFSQFTGMLGIIRQKLEEDGQTLFYMDGKTPSKTRLDMVNAFNEGE 963 Query: 109 IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVY 168 + + G GLNL G + ++ + LWW+ +Q R + G KR V V+ Sbjct: 964 NDIFLISLKAGGTGLNL-VGADTVILYDLWWNPAVEEQATGR-----AHRIGQKRVVQVF 1017 Query: 169 YLIAQNTIDELVLQRLRTKSTIQDLLLN 196 +I + TI+E + + K + D L+ Sbjct: 1018 RMITKGTIEERIFDLQKKKQALVDELIQ 1045 >gi|227364978|ref|ZP_03849019.1| helicase domain protein [Lactobacillus reuteri MM2-3] gi|325681709|ref|ZP_08161229.1| SNF2/helicase domain protein [Lactobacillus reuteri MM4-1A] gi|227069989|gb|EEI08371.1| helicase domain protein [Lactobacillus reuteri MM2-3] gi|324979021|gb|EGC15968.1| SNF2/helicase domain protein [Lactobacillus reuteri MM4-1A] Length = 292 Score = 138 bits (348), Expect = 4e-31, Method: Composition-based stats. Identities = 49/213 (23%), Positives = 89/213 (41%), Gaps = 27/213 (12%) Query: 3 QYHKFQRELYCDLQGENIE-----AFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIK 57 Y + L +Q +N E ++ + +L D KIK Sbjct: 71 LYQARAQRLIRQIQKQNDEEFQQNKLAVLAEITRLRELCCSPQLLDRG---YSGPSGKIK 127 Query: 58 ALEVII--EKANAAPIIVAYHFNSDLARLQKAF---------PQGRTLDKDP-CTIQEWN 105 A +I E A+ I++ F S LA L++ +G+T +D + E+N Sbjct: 128 ATMNLIKDEMADNHKILLFSQFTSALAILKEKLANAGIKYFVIEGKTKKEDRLQFVDEFN 187 Query: 106 EGKIP-LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA 164 P + + G GLNL ++++ F WW++ Q +R + G K Sbjct: 188 SYDQPAVFLISLKAGGTGLNLT-SADVVIHFDPWWNIAAENQATDR-----AHRIGQKNN 241 Query: 165 VFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 V +Y +IAQNTI+E +++ + K+ + + +L+ Sbjct: 242 VTIYKMIAQNTIEEKIVEMQQKKAALANSILSG 274 >gi|148544262|ref|YP_001271632.1| helicase domain-containing protein [Lactobacillus reuteri DSM 20016] gi|148531296|gb|ABQ83295.1| helicase domain protein [Lactobacillus reuteri DSM 20016] Length = 291 Score = 138 bits (348), Expect = 4e-31, Method: Composition-based stats. Identities = 49/213 (23%), Positives = 89/213 (41%), Gaps = 27/213 (12%) Query: 3 QYHKFQRELYCDLQGENIE-----AFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIK 57 Y + L +Q +N E ++ + +L D KIK Sbjct: 70 LYQARAQRLIRQIQKQNDEEFQQNKLAVLAEITRLRELCCSPQLLDRG---YSGPSGKIK 126 Query: 58 ALEVII--EKANAAPIIVAYHFNSDLARLQKAF---------PQGRTLDKDP-CTIQEWN 105 A +I E A+ I++ F S LA L++ +G+T +D + E+N Sbjct: 127 ATMNLIKDEMADNHKILLFSQFTSALAILKEKLANAGIKYFVIEGKTKKEDRLQFVDEFN 186 Query: 106 EGKIP-LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA 164 P + + G GLNL ++++ F WW++ Q +R + G K Sbjct: 187 SYDQPAVFLISLKAGGTGLNLT-SADVVIHFDPWWNIAAENQATDR-----AHRIGQKNN 240 Query: 165 VFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 V +Y +IAQNTI+E +++ + K+ + + +L+ Sbjct: 241 VTIYKMIAQNTIEEKIVEMQQKKAALANSILSG 273 >gi|313632979|gb|EFR99905.1| DNA/RNA helicase protein [Listeria seeligeri FSL N1-067] Length = 1071 Score = 138 bits (348), Expect = 4e-31, Method: Composition-based stats. Identities = 43/208 (20%), Positives = 81/208 (38%), Gaps = 21/208 (10%) Query: 1 MKQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 + K Q +L + E + + Q+ + E + K+ L Sbjct: 847 LAYLEKIQADLAESNGNASEERIKLLAGLTRLRQICCDPSLFVEN---YQGESGKLLQLF 903 Query: 61 VIIEKA--NAAPIIVAYHFNSDLARLQKAFPQ---------GRTLDKDPCT-IQEWNEGK 108 I+ A N +++ F LA +++ + G+T K + +NEG+ Sbjct: 904 DTIQTARENGKRLLIFSQFTGMLAIIRRKLEEDGQTFFYMDGKTPAKTRLDMVNSFNEGE 963 Query: 109 IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVY 168 + + G GLNL G + ++ + LWW+ +Q R + G KR V V+ Sbjct: 964 NDIFLISLKAGGTGLNL-VGADTVILYDLWWNPAVEEQATGR-----AHRIGQKRVVQVF 1017 Query: 169 YLIAQNTIDELVLQRLRTKSTIQDLLLN 196 +I + TI+E + + K + D L+ Sbjct: 1018 RMITKGTIEERIFDLQKKKQALVDELIQ 1045 >gi|307822478|ref|ZP_07652709.1| SNF2-related protein [Methylobacter tundripaludum SV96] gi|307736082|gb|EFO06928.1| SNF2-related protein [Methylobacter tundripaludum SV96] Length = 1083 Score = 138 bits (348), Expect = 4e-31, Method: Composition-based stats. Identities = 35/189 (18%), Positives = 71/189 (37%), Gaps = 18/189 (9%) Query: 24 NSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDL 81 +K Q ++ K K+ L ++ + I+V F + Sbjct: 885 TILDALLKLRQTCCDPRTLSLKEAQKVQESAKLDLLMELLPEQLEEGRRILVFSQFTRMI 944 Query: 82 ARLQKAF---------PQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNIL 132 ++ G+T ++D I+ + G++ + + G GLNL + + Sbjct: 945 GLIENELNDMKIGYAKLTGQTRNRDEA-IERFKSGEVNVFLISLKAGGVGLNLTE-ADTV 1002 Query: 133 VFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQD 192 + + WW+ Q +R + G + VFVY LI +NT++E ++ K + + Sbjct: 1003 IIYDPWWNPAAESQAADR-----AHRIGQDKPVFVYKLITENTVEEKIIAMQDKKRALAE 1057 Query: 193 LLLNALKKE 201 + KE Sbjct: 1058 GIYKGGAKE 1066 >gi|119025981|ref|YP_909826.1| helicase [Bifidobacterium adolescentis ATCC 15703] gi|118765565|dbj|BAF39744.1| possible helicase [Bifidobacterium adolescentis ATCC 15703] Length = 1279 Score = 138 bits (348), Expect = 4e-31, Method: Composition-based stats. Identities = 40/223 (17%), Positives = 81/223 (36%), Gaps = 30/223 (13%) Query: 2 KQYHKFQRELYCDLQGENIEAFNS-----ASKTVKCLQLANGA--VYYDEEKHWKEVHDE 54 K Y ++ L L + FN+ ++ ++ VY D + Sbjct: 1057 KLYAAHEQRLRATLTKASDADFNTKKIRILAEFTLLREICCDPRLVYADAKN-----ASA 1111 Query: 55 KIKALEVIIEK--ANAAPIIVAYHFNSDLARL---------QKAFPQGRT-LDKDPCTIQ 102 K+ A+ ++ ++V F S L + + G T + + Sbjct: 1112 KLDAIVELVATCMDEGKKVLVFSQFTSFLELIGARLAEQGVEYYTITGETPKKRRVELVD 1171 Query: 103 EWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFK 162 E+N +P+ + GLNL G +++V WW+ Q +R + G Sbjct: 1172 EFNGNDVPVFLISLKAGNTGLNL-VGASVVVHADPWWNAAAQNQATDR-----AHRIGQT 1225 Query: 163 RAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIHV 205 + V VY ++A++TI+E +L+ K+ + + + Sbjct: 1226 QDVNVYQIVAKDTIEERILKLQEKKNELARQFTDGTASGGVGT 1268 >gi|237749385|ref|ZP_04579865.1| helicase [Oxalobacter formigenes OXCC13] gi|229380747|gb|EEO30838.1| helicase [Oxalobacter formigenes OXCC13] Length = 1125 Score = 138 bits (348), Expect = 4e-31, Method: Composition-based stats. Identities = 36/188 (19%), Positives = 77/188 (40%), Gaps = 18/188 (9%) Query: 29 TVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQ- 85 +K Q+ K+ L ++++ I+V F S L+ ++ Sbjct: 925 LLKLRQVCCDPRLLRGSAKKANTSSAKLNELMEMLDELLLEKRHILVFSQFTSMLSLIET 984 Query: 86 --------KAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSL 137 G T D+ I+ + +GK+ + + G GLNL + ++ + Sbjct: 985 ELKNRSIPYEILTGDTTDRASA-IRNFQDGKVSVFLISLKAGGVGLNLT-AADTVIHYDP 1042 Query: 138 WWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 WW+ Q +R + G + VFVY LIA+ T++E + + + K+ + +L++ Sbjct: 1043 WWNPAVENQATDRAW-----RIGQDKPVFVYKLIAKGTLEEKIQELQQRKADLATAMLSS 1097 Query: 198 LKKETIHV 205 + + + + Sbjct: 1098 GQAQHVQI 1105 >gi|217964204|ref|YP_002349882.1| DNA/RNA helicase protein [Listeria monocytogenes HCC23] gi|217333474|gb|ACK39268.1| DNA/RNA helicase protein [Listeria monocytogenes HCC23] gi|307571229|emb|CAR84408.1| helicase, Snf2 family [Listeria monocytogenes L99] Length = 1072 Score = 138 bits (348), Expect = 4e-31, Method: Composition-based stats. Identities = 43/208 (20%), Positives = 79/208 (37%), Gaps = 21/208 (10%) Query: 1 MKQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 + K Q +L E + + Q+ + E + K+ L Sbjct: 847 LAYLEKIQADLEASNGNAGEERIKLLAGLTRLRQICCDPSLFVEN---YQGESGKLLQLF 903 Query: 61 VIIEKA--NAAPIIVAYHFNSDLARLQKAFPQ---------GRTLDKDPCT-IQEWNEGK 108 I+ A N I++ F L +++ + G+T K + +NEG+ Sbjct: 904 DTIQTARENGKRILLFSQFTGMLGIIRQKLEEEGQPLFYMDGKTPSKTRLDMVNAFNEGE 963 Query: 109 IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVY 168 + + G GLNL G + ++ + LWW+ +Q R + G KR V V+ Sbjct: 964 NDIFLISLKAGGTGLNL-VGADTVILYDLWWNPAVEEQATGR-----AHRIGQKRVVQVF 1017 Query: 169 YLIAQNTIDELVLQRLRTKSTIQDLLLN 196 +I + TI+E + + K + D L+ Sbjct: 1018 RMITKGTIEERIFDLQKKKQALVDELIQ 1045 >gi|254852266|ref|ZP_05241614.1| helicase [Listeria monocytogenes FSL R2-503] gi|300766136|ref|ZP_07076102.1| Snf2 family helicase [Listeria monocytogenes FSL N1-017] gi|258605574|gb|EEW18182.1| helicase [Listeria monocytogenes FSL R2-503] gi|300513159|gb|EFK40240.1| Snf2 family helicase [Listeria monocytogenes FSL N1-017] Length = 1072 Score = 138 bits (348), Expect = 4e-31, Method: Composition-based stats. Identities = 43/208 (20%), Positives = 79/208 (37%), Gaps = 21/208 (10%) Query: 1 MKQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 + K Q +L E + + Q+ + E + K+ L Sbjct: 847 LAYLEKIQADLEASNGNAGEERIKLLAGLTRLRQICCDPSLFVEN---YQGESGKLLQLF 903 Query: 61 VIIEKA--NAAPIIVAYHFNSDLARLQKAFPQ---------GRTLDKDPCT-IQEWNEGK 108 I+ A N I++ F L +++ + G+T K + +NEG+ Sbjct: 904 DTIQTARENGKRILLFSQFTGMLGIIRQKLEEEGQPLFYMDGKTPSKTRLDMVNAFNEGE 963 Query: 109 IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVY 168 + + G GLNL G + ++ + LWW+ +Q R + G KR V V+ Sbjct: 964 NDIFLISLKAGGTGLNL-VGADTVILYDLWWNPAVEEQATGR-----AHRIGQKRVVQVF 1017 Query: 169 YLIAQNTIDELVLQRLRTKSTIQDLLLN 196 +I + TI+E + + K + D L+ Sbjct: 1018 RMITKGTIEERIFDLQKKKQALVDELIQ 1045 >gi|254824296|ref|ZP_05229297.1| helicase [Listeria monocytogenes FSL J1-194] gi|255520940|ref|ZP_05388177.1| hypothetical protein LmonocFSL_06916 [Listeria monocytogenes FSL J1-175] gi|293593530|gb|EFG01291.1| helicase [Listeria monocytogenes FSL J1-194] Length = 1072 Score = 138 bits (348), Expect = 4e-31, Method: Composition-based stats. Identities = 43/208 (20%), Positives = 79/208 (37%), Gaps = 21/208 (10%) Query: 1 MKQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 + K Q +L E + + Q+ + E + K+ L Sbjct: 847 LAYLEKIQADLEASNGNAGEERIKLLAGLTRLRQICCDPSLFVEN---YQGESGKLLQLF 903 Query: 61 VIIEKA--NAAPIIVAYHFNSDLARLQKAFPQ---------GRTLDKDPCT-IQEWNEGK 108 I+ A N I++ F L +++ + G+T K + +NEG+ Sbjct: 904 DTIQTARENGKRILLFSQFTGMLGIIRQKLEEEGQPLFYMDGKTPSKTRLDMVNAFNEGE 963 Query: 109 IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVY 168 + + G GLNL G + ++ + LWW+ +Q R + G KR V V+ Sbjct: 964 NDIFLISLKAGGTGLNL-VGADTVILYDLWWNPAVEEQATGR-----AHRIGQKRVVQVF 1017 Query: 169 YLIAQNTIDELVLQRLRTKSTIQDLLLN 196 +I + TI+E + + K + D L+ Sbjct: 1018 RMITKGTIEERIFDLQKKKQALVDELIQ 1045 >gi|262193501|ref|YP_003264710.1| SNF2-related protein [Haliangium ochraceum DSM 14365] gi|262076848|gb|ACY12817.1| SNF2-related protein [Haliangium ochraceum DSM 14365] Length = 777 Score = 138 bits (348), Expect = 4e-31, Method: Composition-based stats. Identities = 37/185 (20%), Positives = 64/185 (34%), Gaps = 16/185 (8%) Query: 21 EAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIE--KANAAPIIVAYHFN 78 A +K Q+ + K ++ + I+V F Sbjct: 576 SAIAILDALMKLRQVCCDPRLVTVPSARRVKESAKYALFFDLLSTQREQGRRILVFSQFT 635 Query: 79 SDLARLQKAFPQGRTLDK--------DPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGN 130 S LA L + + + E+ EG+ + + G GLNL + Sbjct: 636 SMLALLSQGLEERGVAHSVLTGATANRQRAVDEFQEGRTEVFLISLKAGGTGLNLTR-AD 694 Query: 131 ILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 +V + WW+ Q +R + G R VFVY LI +++E +L + K + Sbjct: 695 TVVHYDPWWNPAAQAQATDR-----AYRIGQTRPVFVYNLITAGSVEERMLALQQRKRHL 749 Query: 191 QDLLL 195 D +L Sbjct: 750 ADTIL 754 >gi|311113008|ref|YP_003984230.1| hypothetical protein HMPREF0733_11339 [Rothia dentocariosa ATCC 17931] gi|310944502|gb|ADP40796.1| conserved hypothetical protein [Rothia dentocariosa ATCC 17931] Length = 1319 Score = 138 bits (348), Expect = 4e-31, Method: Composition-based stats. Identities = 45/206 (21%), Positives = 86/206 (41%), Gaps = 26/206 (12%) Query: 6 KFQRELYC----DLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEV 61 + +R+ D+ F S + +LA A D + + V K++ L Sbjct: 1102 QRERQKVLGLLDDMDKNRFTIFQSLTL---LRRLALDATLIDPD-EYAGVASAKLEYLVE 1157 Query: 62 IIEKA--NAAPIIVAYHFNSDLARLQKA---------FPQGRTLDKDPCTIQEWNEGKIP 110 + + ++V F L + + + G T ++ P ++++ EG P Sbjct: 1158 HLPSLLGDGHRVLVFSQFTGYLRTIAERLQAEGIDYLYLDGTTRNR-PQVLKDFAEGAAP 1216 Query: 111 LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYL 170 + + G GLNL + + WW+ QQ ++RI + G +R V VY L Sbjct: 1217 VFLISLKAGGFGLNLTEADHCFIM-DPWWNPAAEQQAVDRI-----HRLGQERDVHVYRL 1270 Query: 171 IAQNTIDELVLQRLRTKSTIQDLLLN 196 +A+ TI+E V+ +K+ + D ++N Sbjct: 1271 VAEGTIEEKVMDLKASKAALFDAVVN 1296 >gi|228938966|ref|ZP_04101566.1| Helicase, SWF/SNF [Bacillus thuringiensis serovar berliner ATCC 10792] gi|228971848|ref|ZP_04132469.1| Helicase, SWF/SNF [Bacillus thuringiensis serovar thuringiensis str. T01001] gi|228978456|ref|ZP_04138833.1| Helicase, SWF/SNF [Bacillus thuringiensis Bt407] gi|228781473|gb|EEM29674.1| Helicase, SWF/SNF [Bacillus thuringiensis Bt407] gi|228787938|gb|EEM35896.1| Helicase, SWF/SNF [Bacillus thuringiensis serovar thuringiensis str. T01001] gi|228820815|gb|EEM66840.1| Helicase, SWF/SNF [Bacillus thuringiensis serovar berliner ATCC 10792] gi|326939468|gb|AEA15364.1| SWF/SNF family helicase [Bacillus thuringiensis serovar chinensis CT-43] Length = 1064 Score = 138 bits (348), Expect = 5e-31, Method: Composition-based stats. Identities = 44/206 (21%), Positives = 81/206 (39%), Gaps = 25/206 (12%) Query: 6 KFQRELYCDLQGENI--EAFNSASKTVKCLQLANG-AVYYDEEKHWKEVHDEKIKALEVI 62 K + E L + + + + Q+ A++ D+ K K + L I Sbjct: 849 KLREETLKHLDKDTLRKNKIRILAGLTRLRQICCHPALFVDDYK----GSSAKFEQLLEI 904 Query: 63 IEK--ANAAPIIVAYHFNSDL---------ARLQKAFPQGRTLDKDPCTI-QEWNEGKIP 110 +E+ + I++ F L + + G T +D + +NEG+ Sbjct: 905 LEECRSTGKRILIFSQFTKMLSIIGRELNRQAIPYFYLDGSTPAQDRVELCDRFNEGEGD 964 Query: 111 LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYL 170 L + G GLNL G + ++ + LWW+ QQ +R + G K V V L Sbjct: 965 LFLISLKAGGTGLNLT-GADTVILYDLWWNPAVEQQAADR-----AYRMGQKNTVQVIKL 1018 Query: 171 IAQNTIDELVLQRLRTKSTIQDLLLN 196 +AQ TI+E + + +K + ++ Sbjct: 1019 VAQGTIEEKMHELQESKKNLIAEVIE 1044 >gi|169349519|ref|ZP_02866457.1| hypothetical protein CLOSPI_00240 [Clostridium spiroforme DSM 1552] gi|169293594|gb|EDS75727.1| hypothetical protein CLOSPI_00240 [Clostridium spiroforme DSM 1552] Length = 1064 Score = 138 bits (348), Expect = 5e-31, Method: Composition-based stats. Identities = 42/196 (21%), Positives = 75/196 (38%), Gaps = 25/196 (12%) Query: 15 LQGENIEAFNSASKTVKCLQLANGA--VYYDEEKHWKEVHDEKIKALEVIIEKA--NAAP 70 L E I+ F S + QL +Y D + K+KA II+KA N Sbjct: 859 LDIEQIDKFQILSMMTRLRQLCCEPRILYND-----IQEPSSKMKACLDIIKKAKENKQK 913 Query: 71 IIVAYHFNSDLARLQKAFPQ----------GRTLDKDPCTIQEWNEGKIPLLFAHPASCG 120 +++ F S L ++K + K + + + + G Sbjct: 914 VLLFSSFTSSLEFIEKELRKDDISYYVLTGATNKIKRHQLVNAFQNDNTNVFLISLKAGG 973 Query: 121 HGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELV 180 GLNL +I++ + WW++ Q +R + G V VY LI +N+I+E + Sbjct: 974 TGLNLT-AASIVIHYDPWWNMSAQNQATDR-----AYRIGQVNNVQVYKLIMKNSIEEKI 1027 Query: 181 LQRLRTKSTIQDLLLN 196 + K + ++ + Sbjct: 1028 QKLQEQKQDLSNIFIE 1043 >gi|167756157|ref|ZP_02428284.1| hypothetical protein CLORAM_01680 [Clostridium ramosum DSM 1402] gi|167704149|gb|EDS18728.1| hypothetical protein CLORAM_01680 [Clostridium ramosum DSM 1402] Length = 1068 Score = 138 bits (348), Expect = 5e-31, Method: Composition-based stats. Identities = 44/204 (21%), Positives = 78/204 (38%), Gaps = 23/204 (11%) Query: 6 KFQRELYCDLQGENIEAFNSASKTVKCLQLANGA-VYYDEEKHWKEVHDEKIKALEVIIE 64 + EL L E I+ + + Q+ A + Y+E K+KA II+ Sbjct: 851 QINSELKTALDVERIDKIQILAMMTRLRQICCDARILYNE----IIGPSSKMKACLDIIK 906 Query: 65 KA--NAAPIIVAYHFNSDLARLQKAFPQ----------GRTLDKDPCTIQEWNEGKIPLL 112 KA N +++ F S L L+K + K + + + Sbjct: 907 KAKENNQKVLLFSSFTSSLDLLEKELRKEDISYYVLTGATNKIKRHQLVNAFQNDNTDVF 966 Query: 113 FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIA 172 + G GLNL +I++ F WW++ Q +R + G V VY LI Sbjct: 967 LISLKAGGTGLNLT-AASIVIHFDPWWNMSAQNQATDR-----AYRIGQTNNVQVYKLIM 1020 Query: 173 QNTIDELVLQRLRTKSTIQDLLLN 196 +N+I+E + + K + ++ + Sbjct: 1021 KNSIEEKIQELQAQKQDLSNIFIE 1044 >gi|229043607|ref|ZP_04191314.1| Helicase, SWF/SNF [Bacillus cereus AH676] gi|228725682|gb|EEL76932.1| Helicase, SWF/SNF [Bacillus cereus AH676] Length = 1064 Score = 138 bits (348), Expect = 5e-31, Method: Composition-based stats. Identities = 44/206 (21%), Positives = 81/206 (39%), Gaps = 25/206 (12%) Query: 6 KFQRELYCDLQGENI--EAFNSASKTVKCLQLANG-AVYYDEEKHWKEVHDEKIKALEVI 62 K + E L + + + + Q+ A++ D+ K K + L I Sbjct: 849 KLREETLKHLDKDTLRKNKIRILAGLTRLRQICCHPALFVDDYK----GSSAKFEQLLEI 904 Query: 63 IEK--ANAAPIIVAYHFNSDL---------ARLQKAFPQGRTLDKDPCTI-QEWNEGKIP 110 +E+ + I++ F L + + G T +D + +NEG+ Sbjct: 905 LEECRSTGKRILIFSQFTKMLSIIGRELNRQAIPYFYLDGSTPAQDRVELCDRFNEGEGD 964 Query: 111 LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYL 170 L + G GLNL G + ++ + LWW+ QQ +R + G K V V L Sbjct: 965 LFLISLKAGGTGLNLT-GADTVILYDLWWNPAVEQQAADR-----AYRMGQKNTVQVIKL 1018 Query: 171 IAQNTIDELVLQRLRTKSTIQDLLLN 196 +AQ TI+E + + +K + ++ Sbjct: 1019 VAQGTIEEKMHELQESKKNLIAEVIE 1044 >gi|281357099|ref|ZP_06243589.1| SNF2-related protein [Victivallis vadensis ATCC BAA-548] gi|281316657|gb|EFB00681.1| SNF2-related protein [Victivallis vadensis ATCC BAA-548] Length = 1041 Score = 138 bits (348), Expect = 5e-31, Method: Composition-based stats. Identities = 39/209 (18%), Positives = 79/209 (37%), Gaps = 22/209 (10%) Query: 3 QYHKFQRELYCDL----QGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKA 58 Y K ++E L +G+ + ++ Q+ + K + K Sbjct: 821 LYEKVRKEGLAQLAKYKEGDARGNATVFTTLLRLRQICCHPALLPDGKGD-GIPSAKTDL 879 Query: 59 LEVIIEKA--NAAPIIVAYHFNSDLAR---------LQKAFPQGRTLDKDPCTIQEWNEG 107 L ++ + + +++ F S LA + + G T ++ N Sbjct: 880 LFELLHENIDSNHKMLLFSQFTSLLALTVKELNAEGIPFEYLDGSTRNRQERVDHFNNSP 939 Query: 108 KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFV 167 +IPL + G GLNL + ++ + WW+ Q +R + G RAV Sbjct: 940 EIPLFLLSLKAGGTGLNLT-SADTVIIYDPWWNPAVELQAADR-----THRIGQTRAVSS 993 Query: 168 YYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 L+ +++I+E +L+ K I D +++ Sbjct: 994 VKLVVKDSIEEKILELQERKREIFDSVID 1022 >gi|218233639|ref|YP_002366534.1| putative helicase [Bacillus cereus B4264] gi|218161596|gb|ACK61588.1| putative helicase [Bacillus cereus B4264] Length = 1064 Score = 138 bits (347), Expect = 5e-31, Method: Composition-based stats. Identities = 44/206 (21%), Positives = 81/206 (39%), Gaps = 25/206 (12%) Query: 6 KFQRELYCDLQGENI--EAFNSASKTVKCLQLANG-AVYYDEEKHWKEVHDEKIKALEVI 62 K + E L + + + + Q+ A++ D+ K K + L I Sbjct: 849 KLREETLKHLDKDTLRKNKIRILAGLTRLRQICCHPALFVDDYK----GSSAKFEQLLEI 904 Query: 63 IEK--ANAAPIIVAYHFNSDL---------ARLQKAFPQGRTLDKDPCTI-QEWNEGKIP 110 +E+ + I++ F L + + G T +D + +NEG+ Sbjct: 905 LEECRSTGKRILIFSQFTKMLSIIGRELNRQAIPYFYLDGSTPAQDRVELCDRFNEGEGD 964 Query: 111 LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYL 170 L + G GLNL G + ++ + LWW+ QQ +R + G K V V L Sbjct: 965 LFLISLKAGGTGLNLT-GADTVILYDLWWNPAVEQQAADR-----AYRMGQKNTVQVIKL 1018 Query: 171 IAQNTIDELVLQRLRTKSTIQDLLLN 196 +AQ TI+E + + +K + ++ Sbjct: 1019 VAQGTIEEKMHELQESKKNLIAEVIE 1044 >gi|288917855|ref|ZP_06412216.1| SNF2-related protein [Frankia sp. EUN1f] gi|288350783|gb|EFC84999.1| SNF2-related protein [Frankia sp. EUN1f] Length = 1198 Score = 138 bits (347), Expect = 5e-31, Method: Composition-based stats. Identities = 45/211 (21%), Positives = 80/211 (37%), Gaps = 24/211 (11%) Query: 2 KQYH---KFQRELYCDLQGE-NIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIK 57 + Y + +R+ L G+ N F QL+ A D+E + KI Sbjct: 979 RIYQTHLQRERQKILGLIGDLNRNRFTILRSLTALRQLSLHAGLVDDEHD--DTPSAKID 1036 Query: 58 ALEVIIE--KANAAPIIVAYHFNSDLAR---------LQKAFPQGRTLDKDPCTIQEWNE 106 L + +V F L R ++ + G T D+ ++ + E Sbjct: 1037 VLLEQLRDVADGGHRALVFSQFTRFLGRVRETLTAAGIEHCYLDGSTRDRAG-VLRRFKE 1095 Query: 107 GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVF 166 G P+ + G GLNL + WW+ Q ++R + G R V Sbjct: 1096 GSAPVFLISLKAGGSGLNLTE-ADYCFLLDPWWNPATEAQAVDR-----THRIGQSRNVM 1149 Query: 167 VYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 VY L+A++TI+E V+ K+ + ++++ Sbjct: 1150 VYRLVARDTIEEKVMALKARKAELFSGVMDS 1180 >gi|224282308|ref|ZP_03645630.1| helicase [Bifidobacterium bifidum NCIMB 41171] gi|313139453|ref|ZP_07801646.1| conserved hypothetical protein [Bifidobacterium bifidum NCIMB 41171] gi|313131963|gb|EFR49580.1| conserved hypothetical protein [Bifidobacterium bifidum NCIMB 41171] Length = 1339 Score = 138 bits (347), Expect = 5e-31, Method: Composition-based stats. Identities = 40/216 (18%), Positives = 80/216 (37%), Gaps = 32/216 (14%) Query: 9 RELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKE----------VHDEKIKA 58 R++ CD + A AS +Q A D ++ K+ V K+ A Sbjct: 1117 RQVCCDPRLIYENADGHASALSAGVQSAA----KDPQQSVKQPVKQSKARKTVSSAKLDA 1172 Query: 59 LEVIIEK--ANAAPIIVAYHFNSDLARLQKAF----------PQGRTLDKDPCTIQEWNE 106 + +++ +++ F S L + + + + +N Sbjct: 1173 IIELVDSCRDAGRKMLIFSQFTSYLDLIAQRLRADGVEYDMITGATPKKRRLELVDRFNA 1232 Query: 107 GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVF 166 P+ + GLNL G ++V WW+ Q +R + G + V Sbjct: 1233 DATPVFLISLKAGNTGLNLT-GACVVVHADPWWNAAAQDQATDR-----AHRIGQTQDVN 1286 Query: 167 VYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKET 202 VY ++A++TI+E +L R+K+ + +++ T Sbjct: 1287 VYQIVAKDTIEERILNLQRSKTDLAQRFVDSASSAT 1322 >gi|291455433|ref|ZP_06594823.1| SNF2/RAD54 family helicase [Streptomyces albus J1074] gi|291358382|gb|EFE85284.1| SNF2/RAD54 family helicase [Streptomyces albus J1074] Length = 958 Score = 138 bits (347), Expect = 5e-31, Method: Composition-based stats. Identities = 38/213 (17%), Positives = 81/213 (38%), Gaps = 21/213 (9%) Query: 3 QYHKFQRELYCDLQGENIEAFNSAS--KTVKCLQLANG-AVYYDEEKHWKEVHDEKIKAL 59 Y RE + + Q+ N A Y E++ K++ L Sbjct: 731 LYEAVVRETLAAVAAADGMERRGLIVQLLTSLKQICNHPAQYLKEDRPRVGGRSGKVELL 790 Query: 60 EVIIEK--ANAAPIIVAYHFNSDLARLQKA---------FPQGRT-LDKDPCTIQEWNEG 107 + +++ A A +++ + L++ F G+T + ++ + +G Sbjct: 791 DELLDTILAEGAGVLLFTQYVRMGRLLERHLAARGVATQFLHGQTPIPAREEMVRRFQDG 850 Query: 108 KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFV 167 ++P+ + G GLNL + +V WW+ Q +R + G R V V Sbjct: 851 EVPVFLLSLKAAGTGLNLTRAEH-VVHVDRWWNPAVEAQATDR-----AYRIGQTRPVQV 904 Query: 168 YYLIAQNTIDELVLQRLRTKSTIQDLLLNALKK 200 + ++ + TI++ + + L K + D +L + Sbjct: 905 HRIVTEGTIEDRIAELLVRKQALADAVLTGGEA 937 >gi|239983620|ref|ZP_04706144.1| SNF2/RAD54 family helicase [Streptomyces albus J1074] Length = 956 Score = 138 bits (347), Expect = 5e-31, Method: Composition-based stats. Identities = 38/213 (17%), Positives = 81/213 (38%), Gaps = 21/213 (9%) Query: 3 QYHKFQRELYCDLQGENIEAFNSAS--KTVKCLQLANG-AVYYDEEKHWKEVHDEKIKAL 59 Y RE + + Q+ N A Y E++ K++ L Sbjct: 729 LYEAVVRETLAAVAAADGMERRGLIVQLLTSLKQICNHPAQYLKEDRPRVGGRSGKVELL 788 Query: 60 EVIIEK--ANAAPIIVAYHFNSDLARLQKA---------FPQGRT-LDKDPCTIQEWNEG 107 + +++ A A +++ + L++ F G+T + ++ + +G Sbjct: 789 DELLDTILAEGAGVLLFTQYVRMGRLLERHLAARGVATQFLHGQTPIPAREEMVRRFQDG 848 Query: 108 KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFV 167 ++P+ + G GLNL + +V WW+ Q +R + G R V V Sbjct: 849 EVPVFLLSLKAAGTGLNLTRAEH-VVHVDRWWNPAVEAQATDR-----AYRIGQTRPVQV 902 Query: 168 YYLIAQNTIDELVLQRLRTKSTIQDLLLNALKK 200 + ++ + TI++ + + L K + D +L + Sbjct: 903 HRIVTEGTIEDRIAELLVRKQALADAVLTGGEA 935 >gi|84495493|ref|ZP_00994612.1| SNF2-like [Janibacter sp. HTCC2649] gi|84384986|gb|EAQ00866.1| SNF2-like [Janibacter sp. HTCC2649] Length = 1099 Score = 138 bits (347), Expect = 5e-31, Method: Composition-based stats. Identities = 46/197 (23%), Positives = 79/197 (40%), Gaps = 21/197 (10%) Query: 11 LYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKAL-EVIIE-KANA 68 L DL G I + + Q+A D E + K++AL E + E A Sbjct: 893 LIDDLDGNRIAILRALTV---LRQMALDPSLVDAEAYGGVAPSAKVEALVEQVAELAAEG 949 Query: 69 APIIVAYHFNSDL---------ARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASC 119 +V F S L + A+ G T ++ ++E+ EG+ P+ + Sbjct: 950 HRALVFSQFTSFLSIVRDRLEEEGIAYAYLDGSTRNR-ADVVKEFREGEAPVFLISLKAG 1008 Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 G GL L + V WW+ Q I+R + G ++V VY L++ +TI+E Sbjct: 1009 GFGLTLTEADYVFVL-DPWWNPAAENQAIDR-----AHRIGQTKSVNVYRLVSTDTIEEK 1062 Query: 180 VLQRLRTKSTIQDLLLN 196 V+ K + +++ Sbjct: 1063 VVALQDKKRDLFARVVD 1079 >gi|254829448|ref|ZP_05234135.1| helicase [Listeria monocytogenes FSL N3-165] gi|258601864|gb|EEW15189.1| helicase [Listeria monocytogenes FSL N3-165] Length = 1072 Score = 138 bits (347), Expect = 5e-31, Method: Composition-based stats. Identities = 43/208 (20%), Positives = 79/208 (37%), Gaps = 21/208 (10%) Query: 1 MKQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 + K Q +L E + + Q+ + E + K+ L Sbjct: 847 LAYLEKIQADLEASNGNAGEERIKLLAGLTRLRQICCDPSLFVEN---YQGESGKLLQLF 903 Query: 61 VIIEKA--NAAPIIVAYHFNSDLARLQKAFPQ---------GRTLDKDPCT-IQEWNEGK 108 I+ A N I++ F L +++ + G+T K + +NEG+ Sbjct: 904 DTIQTARENGKRILLFSQFTGMLGIIRQKLEEDGQTLFYMDGKTPSKTRLDMVNAFNEGE 963 Query: 109 IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVY 168 + + G GLNL G + ++ + LWW+ +Q R + G KR V V+ Sbjct: 964 NDIFLISLKAGGTGLNL-VGADTVILYDLWWNPAVEEQATGR-----AHRIGQKRVVQVF 1017 Query: 169 YLIAQNTIDELVLQRLRTKSTIQDLLLN 196 +I + TI+E + + K + D L+ Sbjct: 1018 RMITKGTIEERIFDLQKKKQALVDELIQ 1045 >gi|325956842|ref|YP_004292254.1| Non-specific serine/threonine protein kinase [Lactobacillus acidophilus 30SC] gi|325333407|gb|ADZ07315.1| Non-specific serine/threonine protein kinase [Lactobacillus acidophilus 30SC] Length = 1179 Score = 138 bits (347), Expect = 5e-31, Method: Composition-based stats. Identities = 43/212 (20%), Positives = 90/212 (42%), Gaps = 27/212 (12%) Query: 3 QYHKFQRELYCDLQGENIE-----AFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIK 57 YH ++ L G++ + F ++ K ++ + H K +K+K Sbjct: 958 LYHLQMNKIIAQLNGQDDDDFKKFRFQILAQITKLREICCDPHLLYDNYHGK---SDKLK 1014 Query: 58 ALEVIIEKA--NAAPIIVAYHFNSDLARLQKAFPQGRT----------LDKDPCTIQEWN 105 A +I+ N I++ F S L LQ+ + + +K IQ +N Sbjct: 1015 ATIDLIKSNLENGHKILLFSQFTSMLDILQEKLAKLKVPTFMLTGSTPKEKRQEDIQHFN 1074 Query: 106 EGKIP-LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA 164 K P + + G G+NL ++++ + WW++ Q +R + G K + Sbjct: 1075 SLKQPGVFLISLKAGGTGINLT-SADVVIHYDPWWNIAAENQATDR-----AHRIGQKNS 1128 Query: 165 VFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 V +Y ++ Q+T++E +++ + K+ + +LN Sbjct: 1129 VKIYKMVTQDTVEERIIKLQQKKAELAQAILN 1160 >gi|229144464|ref|ZP_04272868.1| Helicase, SWF/SNF [Bacillus cereus BDRD-ST24] gi|228638999|gb|EEK95425.1| Helicase, SWF/SNF [Bacillus cereus BDRD-ST24] Length = 1064 Score = 138 bits (347), Expect = 5e-31, Method: Composition-based stats. Identities = 44/206 (21%), Positives = 81/206 (39%), Gaps = 25/206 (12%) Query: 6 KFQRELYCDLQGENI--EAFNSASKTVKCLQLANG-AVYYDEEKHWKEVHDEKIKALEVI 62 K + E L + + + + Q+ A++ D+ K K + L I Sbjct: 849 KLREETLKHLDKDTLRKNKIRILAGLTRLRQICCHPALFVDDYK----GSSAKFEQLLEI 904 Query: 63 IEK--ANAAPIIVAYHFNSDL---------ARLQKAFPQGRTLDKDPCTI-QEWNEGKIP 110 +E+ + I++ F L + + G T +D + +NEG+ Sbjct: 905 LEECRSTGKRILIFSQFTKMLSIIGRELNRQAIPYFYLDGSTPAQDRVELCDRFNEGEGD 964 Query: 111 LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYL 170 L + G GLNL G + ++ + LWW+ QQ +R + G K V V L Sbjct: 965 LFLISLKAGGTGLNLT-GADTVILYDLWWNPAVEQQAADR-----AYRMGQKNTVQVIKL 1018 Query: 171 IAQNTIDELVLQRLRTKSTIQDLLLN 196 +AQ TI+E + + +K + ++ Sbjct: 1019 VAQGTIEEKMHELQESKKNLIAEVIE 1044 >gi|229109309|ref|ZP_04238907.1| Helicase, SWF/SNF [Bacillus cereus Rock1-15] gi|228674146|gb|EEL29392.1| Helicase, SWF/SNF [Bacillus cereus Rock1-15] Length = 1064 Score = 138 bits (347), Expect = 5e-31, Method: Composition-based stats. Identities = 44/206 (21%), Positives = 81/206 (39%), Gaps = 25/206 (12%) Query: 6 KFQRELYCDLQGENI--EAFNSASKTVKCLQLANG-AVYYDEEKHWKEVHDEKIKALEVI 62 K + E L + + + + Q+ A++ D+ K K + L I Sbjct: 849 KLREETLKHLDKDTLRKNKIRILAGLTRLRQICCHPALFVDDYK----GSSAKFEQLLEI 904 Query: 63 IEK--ANAAPIIVAYHFNSDL---------ARLQKAFPQGRTLDKDPCTI-QEWNEGKIP 110 +E+ + I++ F L + + G T +D + +NEG+ Sbjct: 905 LEECRSTGKRILIFSQFTKMLSIIGRELNRQAIPYFYLDGSTPAQDRVELCDRFNEGEGD 964 Query: 111 LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYL 170 L + G GLNL G + ++ + LWW+ QQ +R + G K V V L Sbjct: 965 LFLISLKAGGTGLNLT-GADTVILYDLWWNPAVEQQAADR-----AYRMGQKNTVQVIKL 1018 Query: 171 IAQNTIDELVLQRLRTKSTIQDLLLN 196 +AQ TI+E + + +K + ++ Sbjct: 1019 VAQGTIEEKMHELQESKKNLIAEVIE 1044 >gi|238063663|ref|ZP_04608372.1| SNF2/RAD54 family helicase [Micromonospora sp. ATCC 39149] gi|237885474|gb|EEP74302.1| SNF2/RAD54 family helicase [Micromonospora sp. ATCC 39149] Length = 929 Score = 138 bits (347), Expect = 6e-31, Method: Composition-based stats. Identities = 39/212 (18%), Positives = 80/212 (37%), Gaps = 22/212 (10%) Query: 2 KQYHKFQRELYCDLQGENIEAF---NSASKTVKCLQLANG-AVYYDEEKHWKEVHDEKIK 57 Y + ++ +++ V Q+ N A Y E EK+ Sbjct: 701 ALYQRVVDDVLAEIRASTTSMARRGLVLKLLVGLKQVCNHPAHYLKEPHGRLTGRSEKLH 760 Query: 58 ALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQ----------GRTLDKDPCTIQEWN 105 L+ ++E A +V + L++ + G + + ++ + Sbjct: 761 LLDDLLETILAEEGGALVFTQYVQMARLLKRHLAERGVPAQLLHGGTPVPQREEMVRRFQ 820 Query: 106 EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 G++P+ + G GLNL + ++ F WW+ +Q +R + G + V Sbjct: 821 AGEVPVFLLSLKAAGTGLNLTR-ADHVIHFDRWWNPAVEEQATDR-----AYRIGQTKPV 874 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 V+ LIAQ T+++ + L +K + D +L Sbjct: 875 QVHRLIAQGTLEDRIAALLESKRELADAVLTG 906 >gi|311063653|ref|YP_003970378.1| helicase [Bifidobacterium bifidum PRL2010] gi|310865972|gb|ADP35341.1| Helicase [Bifidobacterium bifidum PRL2010] Length = 1339 Score = 138 bits (347), Expect = 6e-31, Method: Composition-based stats. Identities = 40/216 (18%), Positives = 80/216 (37%), Gaps = 32/216 (14%) Query: 9 RELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKE----------VHDEKIKA 58 R++ CD + A AS +Q A D ++ K+ V K+ A Sbjct: 1117 RQVCCDPRLIYENADGHASALSAGVQSAA----KDPQQSVKQPVKQSKARKTVSSAKLDA 1172 Query: 59 LEVIIEK--ANAAPIIVAYHFNSDLARLQKAF----------PQGRTLDKDPCTIQEWNE 106 + +++ +++ F S L + + + + +N Sbjct: 1173 IIELVDSCRDAGRKMLIFSQFTSYLDLIAQRLRADGVEYDMITGATPKKRRLELVDRFNA 1232 Query: 107 GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVF 166 P+ + GLNL G ++V WW+ Q +R + G + V Sbjct: 1233 DATPVFLISLKAGNTGLNLT-GACVVVHADPWWNAAAQDQATDR-----AHRIGQTQDVN 1286 Query: 167 VYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKET 202 VY ++A++TI+E +L R+K+ + +++ T Sbjct: 1287 VYQIVAKDTIEERILNLQRSKTDLAQRFVDSASSAT 1322 >gi|310286756|ref|YP_003938014.1| helicase [Bifidobacterium bifidum S17] gi|309250692|gb|ADO52440.1| helicase [Bifidobacterium bifidum S17] Length = 1339 Score = 138 bits (347), Expect = 6e-31, Method: Composition-based stats. Identities = 40/216 (18%), Positives = 80/216 (37%), Gaps = 32/216 (14%) Query: 9 RELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKE----------VHDEKIKA 58 R++ CD + A AS +Q A D ++ K+ V K+ A Sbjct: 1117 RQVCCDPRLIYENADGHASALSAGVQSAA----KDPQQSVKQPVKQSKARKTVSSAKLDA 1172 Query: 59 LEVIIEK--ANAAPIIVAYHFNSDLARLQKAF----------PQGRTLDKDPCTIQEWNE 106 + +++ +++ F S L + + + + +N Sbjct: 1173 IIELVDSCRDAGRKMLIFSQFTSYLDLIAQRLRADGVEYDMITGATPKKRRLELVDRFNA 1232 Query: 107 GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVF 166 P+ + GLNL G ++V WW+ Q +R + G + V Sbjct: 1233 DATPVFLISLKAGNTGLNLT-GACVVVHADPWWNAAAQDQATDR-----AHRIGQTQDVN 1286 Query: 167 VYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKET 202 VY ++A++TI+E +L R+K+ + +++ T Sbjct: 1287 VYQIVAKDTIEERILNLQRSKTDLAQRFVDSASSAT 1322 >gi|229150056|ref|ZP_04278279.1| Helicase, SWF/SNF [Bacillus cereus m1550] gi|228633355|gb|EEK89961.1| Helicase, SWF/SNF [Bacillus cereus m1550] Length = 1064 Score = 138 bits (347), Expect = 6e-31, Method: Composition-based stats. Identities = 44/206 (21%), Positives = 81/206 (39%), Gaps = 25/206 (12%) Query: 6 KFQRELYCDLQGENI--EAFNSASKTVKCLQLANG-AVYYDEEKHWKEVHDEKIKALEVI 62 K + E L + + + + Q+ A++ D+ K K + L I Sbjct: 849 KLREETLKHLDKDTLRKNKIRILAGLTRLRQICCHPALFVDDYK----GSSAKFEQLLEI 904 Query: 63 IEK--ANAAPIIVAYHFNSDL---------ARLQKAFPQGRTLDKDPCTI-QEWNEGKIP 110 +E+ + I++ F L + + G T +D + +NEG+ Sbjct: 905 LEECRSTGKRILIFSQFTKMLSIIGRELNRQAIPYFYLDGSTPAQDRVELCDRFNEGEGD 964 Query: 111 LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYL 170 L + G GLNL G + ++ + LWW+ QQ +R + G K V V L Sbjct: 965 LFLISLKAGGTGLNLT-GADTVILYDLWWNPAVEQQAADR-----AYRMGQKNTVQVIKL 1018 Query: 171 IAQNTIDELVLQRLRTKSTIQDLLLN 196 +AQ TI+E + + +K + ++ Sbjct: 1019 VAQGTIEEKMHELQESKKNLIAEVIE 1044 >gi|295704607|ref|YP_003597682.1| SNF2 helicase family protein [Bacillus megaterium DSM 319] gi|294802266|gb|ADF39332.1| SNF2 helicase family protein [Bacillus megaterium DSM 319] Length = 1068 Score = 138 bits (347), Expect = 6e-31, Method: Composition-based stats. Identities = 38/183 (20%), Positives = 73/183 (39%), Gaps = 21/183 (11%) Query: 26 ASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLAR 83 + + Q+ + E E + K++ L I A N +++ F S L Sbjct: 875 LAGLTRLRQICCHPSLFVEN---YEGYSSKLEQLLEITRNAVANGKRLLIFSQFTSMLHI 931 Query: 84 LQKAFPQ---------GRTLDKDP-CTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILV 133 +++ + G+T K+ +N G+ + + G GLNL G + ++ Sbjct: 932 IREELQKENLSYFYLDGQTPSKERVEMADRFNNGEQDIFLISLKAGGTGLNLT-GADTVI 990 Query: 134 FFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDL 193 + LWW+ +Q R + G K V V LI+Q TI+E + + K + + Sbjct: 991 LYDLWWNPAIEEQAAGR-----AHRIGQKNVVQVIKLISQGTIEEKIYGLQQKKKELIEQ 1045 Query: 194 LLN 196 ++ Sbjct: 1046 VIQ 1048 >gi|168217982|ref|ZP_02643607.1| helicase, SNF2/RAD54 family [Clostridium perfringens NCTC 8239] gi|182379962|gb|EDT77441.1| helicase, SNF2/RAD54 family [Clostridium perfringens NCTC 8239] Length = 1084 Score = 137 bits (346), Expect = 6e-31, Method: Composition-based stats. Identities = 46/197 (23%), Positives = 72/197 (36%), Gaps = 25/197 (12%) Query: 14 DLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKE--VHDEKIKALEVIIEKA--NAA 69 D + N S K QLA D + KI+AL I+ + Sbjct: 871 DAEEFNKSKIEILSYITKLRQLA-----LDPSVTINDYMGESAKIEALVEILNQGIEEGH 925 Query: 70 PIIVAYHFNSDLARLQKAFPQGRTL----------DKDPCTIQEWNEGKIPLLFAHPASC 119 I+V F S L + + + K + E+NEG+ + + Sbjct: 926 KILVFSQFTSVLKNISSRLKEEKISFSYLDGSVSSKKRINMVNEFNEGENSVFLISLKAG 985 Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 G GLNL +I++ F WW+ Q +R + G K V V LIA+ TI+E Sbjct: 986 GTGLNLT-SADIVIHFDPWWNPAVENQATDR-----AHRMGQKNVVEVIKLIAKGTIEEK 1039 Query: 180 VLQRLRTKSTIQDLLLN 196 V+ K + ++ Sbjct: 1040 VVALQEEKKELISKIIE 1056 >gi|297569291|ref|YP_003690635.1| SNF2-related protein [Desulfurivibrio alkaliphilus AHT2] gi|296925206|gb|ADH86016.1| SNF2-related protein [Desulfurivibrio alkaliphilus AHT2] Length = 1309 Score = 137 bits (346), Expect = 7e-31, Method: Composition-based stats. Identities = 37/216 (17%), Positives = 76/216 (35%), Gaps = 26/216 (12%) Query: 2 KQYHKFQRELYCDLQGENI-----EAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKI 56 Y +R+ L+ ++ +K + + + K+ Sbjct: 1088 ALYEALRRQARATLKNGANRDRPGAPLQVLAEIMKLRRACCHPRLVLPDST---MPGAKL 1144 Query: 57 KALEVIIEKA--NAAPIIVAYHFNSDLARLQKA----------FPQGRTLDKDPCTIQEW 104 + L ++ + N I+V F LA +++ F ++++ Sbjct: 1145 ELLTKVVAELLENRHRILVFSQFVDHLAIVRQYLDEQQISYQYFDGATPARVRQQRVRDF 1204 Query: 105 NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA 164 G+ L + G GLNL + ++ WW+ +Q +R + G + Sbjct: 1205 QAGRGKLFLISLRAGGLGLNLT-AADYVIHLDPWWNPAVEEQASDR-----AHRIGQDKP 1258 Query: 165 VFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKK 200 V +Y LI TI+E +L + K + LL+A + Sbjct: 1259 VTIYRLITTGTIEEKILAMHQQKRHLAAELLDATRS 1294 >gi|229542960|ref|ZP_04432020.1| SNF2 helicase associated domain protein [Bacillus coagulans 36D1] gi|229327380|gb|EEN93055.1| SNF2 helicase associated domain protein [Bacillus coagulans 36D1] Length = 1081 Score = 137 bits (346), Expect = 7e-31, Method: Composition-based stats. Identities = 37/183 (20%), Positives = 72/183 (39%), Gaps = 21/183 (11%) Query: 26 ASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLAR 83 + + QL + E K++ L + A N +++ F+S L Sbjct: 888 LAGLTRLRQLCCHPALFVEN---YRGESGKLEQLVELAHTAIENGKRLLIFSQFSSMLQL 944 Query: 84 LQKA---------FPQGRTLDKDP-CTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILV 133 ++ + G+T ++ +N G+ + + G GLNL G + +V Sbjct: 945 IRTRLSDEGIDSFYLDGQTPSRERVEMADRFNSGEKNVFLISLKAGGTGLNLT-GADTVV 1003 Query: 134 FFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDL 193 + LWW+ +Q R + G K V V LIA+ TI+E + + + K + + Sbjct: 1004 LYDLWWNPAVEEQAAGR-----AHRIGQKNVVQVIRLIARGTIEEKIYELQQKKKELIEK 1058 Query: 194 LLN 196 ++ Sbjct: 1059 VIQ 1061 >gi|239918579|ref|YP_002958137.1| DNA/RNA helicase, superfamily II, SNF2 family [Micrococcus luteus NCTC 2665] gi|239839786|gb|ACS31583.1| DNA/RNA helicase, superfamily II, SNF2 family [Micrococcus luteus NCTC 2665] Length = 1143 Score = 137 bits (346), Expect = 7e-31, Method: Composition-based stats. Identities = 50/213 (23%), Positives = 85/213 (39%), Gaps = 30/213 (14%) Query: 2 KQYHK-FQRE------LYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDE 54 K Y + QRE L D+ G F S + LA D+ + V Sbjct: 916 KLYDRVLQRERRKVLGLLGDMDGNRFTIFKSLTL---LRMLALAPQIVDD--QYASVPSS 970 Query: 55 KIKA-LEVIIEK-ANAAPIIVAYHFNSDLA---------RLQKAFPQGRTLDKDPCTIQE 103 K++ L+ + E +IV F S L ++ A+ G T + I+ Sbjct: 971 KLERFLDDLTEVIGEGHRVIVFSQFTSFLRVIAEELDHLEIEHAYLDGSTRGR-ADVIRG 1029 Query: 104 WNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKR 163 + EG+ P+ + G GL L + + WW+ Q ++R + G +R Sbjct: 1030 FREGEAPVFLISLKAGGFGLTLTE-ADYVFLMDPWWNPAAEAQAVDR-----AHRIGQER 1083 Query: 164 AVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 V VY L+++ TI+E VL+ K+ + L++ Sbjct: 1084 TVMVYRLVSEGTIEEKVLELQWRKAELFGALMD 1116 >gi|110801800|ref|YP_698913.1| Snf2/Rad54 family helicase [Clostridium perfringens SM101] gi|110682301|gb|ABG85671.1| helicase, SNF2/RAD54 family [Clostridium perfringens SM101] Length = 1084 Score = 137 bits (346), Expect = 7e-31, Method: Composition-based stats. Identities = 46/197 (23%), Positives = 72/197 (36%), Gaps = 25/197 (12%) Query: 14 DLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKE--VHDEKIKALEVIIEKA--NAA 69 D + N S K QLA D + KI+AL I+ + Sbjct: 871 DAEEFNKSKIEILSYITKLRQLA-----LDPSVTINDYMGESAKIEALVEILNQGIEEGH 925 Query: 70 PIIVAYHFNSDLARLQKAFPQGRTL----------DKDPCTIQEWNEGKIPLLFAHPASC 119 I+V F S L + + + K + E+NEG+ + + Sbjct: 926 KILVFSQFTSVLKNISSRLKEEKISFSYLDGSVSSKKRINMVNEFNEGENSVFLISLKAG 985 Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 G GLNL +I++ F WW+ Q +R + G K V V LIA+ TI+E Sbjct: 986 GTGLNLT-SADIVIHFDPWWNPAVENQATDR-----AHRMGQKNVVEVIKLIAKGTIEEK 1039 Query: 180 VLQRLRTKSTIQDLLLN 196 V+ K + ++ Sbjct: 1040 VVALQEEKKELISKIIE 1056 >gi|18310607|ref|NP_562541.1| helicase, SNF2/RAD54 family [Clostridium perfringens str. 13] gi|18145288|dbj|BAB81331.1| SWI/SNF family helicase [Clostridium perfringens str. 13] Length = 1084 Score = 137 bits (346), Expect = 7e-31, Method: Composition-based stats. Identities = 46/197 (23%), Positives = 72/197 (36%), Gaps = 25/197 (12%) Query: 14 DLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKE--VHDEKIKALEVIIEKA--NAA 69 D + N S K QLA D + KI+AL I+ + Sbjct: 871 DAEEFNKSKIEILSYITKLRQLA-----LDPSVTINDYMGESAKIEALVEILNQGVEEGH 925 Query: 70 PIIVAYHFNSDLARLQKAFPQGRTL----------DKDPCTIQEWNEGKIPLLFAHPASC 119 I+V F S L + + + K + E+NEG+ + + Sbjct: 926 KILVFSQFTSVLKNISSRLKEEKISFSYLDGSVSSKKRINMVNEFNEGENSVFLISLKAG 985 Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 G GLNL +I++ F WW+ Q +R + G K V V LIA+ TI+E Sbjct: 986 GTGLNLT-SADIVIHFDPWWNPAVENQATDR-----AHRMGQKNVVEVIKLIAKGTIEEK 1039 Query: 180 VLQRLRTKSTIQDLLLN 196 V+ K + ++ Sbjct: 1040 VVALQEEKKELISKIIE 1056 >gi|269216031|ref|ZP_06159885.1| domain protein, SNF2 family [Slackia exigua ATCC 700122] gi|269130290|gb|EEZ61368.1| domain protein, SNF2 family [Slackia exigua ATCC 700122] Length = 1078 Score = 137 bits (346), Expect = 7e-31, Method: Composition-based stats. Identities = 43/211 (20%), Positives = 79/211 (37%), Gaps = 28/211 (13%) Query: 2 KQYHKFQRELYCDLQGENIEA---FNSASKTVKCLQLA--NGAVYYDEEKHWKEVHDEKI 56 + + + R E + ++ + Q+A +Y D K Sbjct: 858 QAHEQLLRTKIAHEGEEGDDGRSKVEILAELTRLRQIALDPSLLYAD-----YRGGGAKE 912 Query: 57 KALEVIIEK--ANAAPIIVAYHFNSDLARL---------QKAFPQGRT-LDKDPCTIQEW 104 +A+ I A+ ++V F S L + + G T K + + Sbjct: 913 QAIMDTIASCIASGEKVLVFSQFTSYLDIIGAKLSEQGVKHYVITGSTPKKKRLALVDAF 972 Query: 105 NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA 164 N P+ + G GLNL G ++++ WW+ Q +R + G R Sbjct: 973 NADDTPVFLISLKAGGTGLNLT-GASVVLHADPWWNAAAQNQATDR-----AHRMGQTRI 1026 Query: 165 VFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 V VY +IA++TI+E +L+ KS + D ++ Sbjct: 1027 VNVYRVIAKDTIEERILKLQDAKSDLADRIV 1057 >gi|168207158|ref|ZP_02633163.1| helicase, SNF2/RAD54 family [Clostridium perfringens E str. JGS1987] gi|170661452|gb|EDT14135.1| helicase, SNF2/RAD54 family [Clostridium perfringens E str. JGS1987] Length = 1084 Score = 137 bits (346), Expect = 7e-31, Method: Composition-based stats. Identities = 46/197 (23%), Positives = 72/197 (36%), Gaps = 25/197 (12%) Query: 14 DLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKE--VHDEKIKALEVIIEKA--NAA 69 D + N S K QLA D + KI+AL I+ + Sbjct: 871 DAEEFNKSKIEILSYITKLRQLA-----LDPSVTINDYMGESAKIEALVEILNQGIEEGH 925 Query: 70 PIIVAYHFNSDLARLQKAFPQGRTL----------DKDPCTIQEWNEGKIPLLFAHPASC 119 I+V F S L + + + K + E+NEG+ + + Sbjct: 926 KILVFSQFTSVLKNISSRLKEEKISFSYLDGSVSSKKRINMVNEFNEGENSVFLISLKAG 985 Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 G GLNL +I++ F WW+ Q +R + G K V V LIA+ TI+E Sbjct: 986 GTGLNLT-SADIVIHFDPWWNPAVENQATDR-----AHRMGQKNVVEVIKLIAKGTIEEK 1039 Query: 180 VLQRLRTKSTIQDLLLN 196 V+ K + ++ Sbjct: 1040 VVALQEEKKELISKIIE 1056 >gi|152975221|ref|YP_001374738.1| non-specific serine/threonine protein kinase [Bacillus cereus subsp. cytotoxis NVH 391-98] gi|152023973|gb|ABS21743.1| Non-specific serine/threonine protein kinase [Bacillus cytotoxicus NVH 391-98] Length = 1066 Score = 137 bits (346), Expect = 7e-31, Method: Composition-based stats. Identities = 43/206 (20%), Positives = 82/206 (39%), Gaps = 25/206 (12%) Query: 6 KFQRELYCDLQGENI--EAFNSASKTVKCLQLANG-AVYYDEEKHWKEVHDEKIKALEVI 62 K + E L + + + + Q+ A++ D+ K K + L I Sbjct: 851 KLREETLKHLDKDTLRKNKIRILAGLTRLRQICCHPALFVDDYK----GSSAKFEQLLEI 906 Query: 63 IEK--ANAAPIIVAYHFNSDLARL-----QKAFPQGRTLDKDPCTIQ-----EWNEGKIP 110 +E+ + I++ F L+ + ++A P P + +NEG+ Sbjct: 907 LEECRSTGKRILIFSQFTKMLSIIGRELNRQAIPYFYLDGNTPSQERVELCNRFNEGEGD 966 Query: 111 LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYL 170 L + G GLNL G + ++ + LWW+ QQ +R + G K V V L Sbjct: 967 LFLISLKAGGTGLNLT-GADTVILYDLWWNPSVEQQAADR-----AYRMGQKNTVQVIKL 1020 Query: 171 IAQNTIDELVLQRLRTKSTIQDLLLN 196 +A+ TI+E + + +K + ++ Sbjct: 1021 VARGTIEEKIHELQESKKNLIAEVIE 1046 >gi|270157430|ref|ZP_06186087.1| SNF2/RAD54 family DNA helicase [Legionella longbeachae D-4968] gi|289164177|ref|YP_003454315.1| DNA/RNA helicases, superfamily II, SNF2 family [Legionella longbeachae NSW150] gi|269989455|gb|EEZ95709.1| SNF2/RAD54 family DNA helicase [Legionella longbeachae D-4968] gi|288857350|emb|CBJ11178.1| putative DNA/RNA helicases, superfamily II, SNF2 family [Legionella longbeachae NSW150] Length = 1091 Score = 137 bits (346), Expect = 8e-31, Method: Composition-based stats. Identities = 35/173 (20%), Positives = 67/173 (38%), Gaps = 20/173 (11%) Query: 44 EEKHWKEVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQKAFPQGRTLD------ 95 E K++AL ++ ++V F S L +++ + R D Sbjct: 913 PEAAIAHGTSAKLEALMDLLNNLIGEGRRVLVFSQFTSMLQLIEEEL-RARHYDYLKLTG 971 Query: 96 ---KDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIG 152 + ++ EG P+ + G GLNL + ++ + WW+ Q +R Sbjct: 972 QTQHRQAMVDKFQEGNTPVFLISLKAGGTGLNLTR-ADTVIQYDPWWNPAVEAQATDR-- 1028 Query: 153 VTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL--NALKKETI 203 + G + VFVY LI T++E +L K + + +L ++ K + Sbjct: 1029 ---AHRIGQENPVFVYKLITAGTVEEAILTMQEKKRLLGESVLSPDSTKATAL 1078 >gi|110800752|ref|YP_696312.1| Snf2/Rad54 family helicase [Clostridium perfringens ATCC 13124] gi|110675399|gb|ABG84386.1| helicase, SNF2/RAD54 family [Clostridium perfringens ATCC 13124] Length = 1084 Score = 137 bits (346), Expect = 8e-31, Method: Composition-based stats. Identities = 47/196 (23%), Positives = 75/196 (38%), Gaps = 23/196 (11%) Query: 14 DLQGENIEAFNSASKTVKCLQLA-NGAVYYDEEKHWKEVHDEKIKALEVIIEKA--NAAP 70 D + N S K QLA + AV ++ KI+AL I+ + Sbjct: 871 DAEEFNKSKIEILSYITKLRQLALDPAVTIND----YMGESAKIEALVEILNQGIEEGHK 926 Query: 71 IIVAYHFNSDLARLQKAFPQGRTL----------DKDPCTIQEWNEGKIPLLFAHPASCG 120 I+V F S L + + + K + E+NEG+ + + G Sbjct: 927 ILVFSQFTSVLKNISSRLKEEKISFSYLDGSVSSKKRINMVNEFNEGENSVFLISLKAGG 986 Query: 121 HGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELV 180 GLNL +I++ F WW+ Q +R + G K V V LIA+ TI+E V Sbjct: 987 TGLNLT-SADIVIHFDPWWNPAVENQATDR-----AHRMGQKNVVEVIKLIAKGTIEEKV 1040 Query: 181 LQRLRTKSTIQDLLLN 196 + K + ++ Sbjct: 1041 VALQEEKKELISKIIE 1056 >gi|228907542|ref|ZP_04071399.1| Helicase, SWF/SNF [Bacillus thuringiensis IBL 200] gi|228852034|gb|EEM96831.1| Helicase, SWF/SNF [Bacillus thuringiensis IBL 200] Length = 1064 Score = 137 bits (346), Expect = 8e-31, Method: Composition-based stats. Identities = 43/206 (20%), Positives = 81/206 (39%), Gaps = 25/206 (12%) Query: 6 KFQRELYCDLQGENI--EAFNSASKTVKCLQLANG-AVYYDEEKHWKEVHDEKIKALEVI 62 K + E L + + + + Q+ A++ D+ K K + L I Sbjct: 849 KLREETLKHLDKDTLRKNKIRILAGLTRLRQICCHPALFVDDYK----GSSAKFEQLLEI 904 Query: 63 IEK--ANAAPIIVAYHFNSDL---------ARLQKAFPQGRTLDKDPCTI-QEWNEGKIP 110 +E+ + I++ F L + + G T ++ + +NEG+ Sbjct: 905 LEECRSTGKRILIFSQFTKMLSIIGRELNRQAIPYFYLDGSTPAQERVELCDRFNEGEGD 964 Query: 111 LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYL 170 L + G GLNL G + ++ + LWW+ QQ +R + G K V V L Sbjct: 965 LFLISLKAGGTGLNLT-GADTVILYDLWWNPAVEQQAADR-----AYRMGQKNTVQVIKL 1018 Query: 171 IAQNTIDELVLQRLRTKSTIQDLLLN 196 +AQ TI+E + + +K + ++ Sbjct: 1019 VAQGTIEEKMHELQESKKNLIAEVIE 1044 >gi|168209303|ref|ZP_02634928.1| helicase, SNF2/RAD54 family [Clostridium perfringens B str. ATCC 3626] gi|170712526|gb|EDT24708.1| helicase, SNF2/RAD54 family [Clostridium perfringens B str. ATCC 3626] Length = 1084 Score = 137 bits (346), Expect = 8e-31, Method: Composition-based stats. Identities = 47/196 (23%), Positives = 75/196 (38%), Gaps = 23/196 (11%) Query: 14 DLQGENIEAFNSASKTVKCLQLA-NGAVYYDEEKHWKEVHDEKIKALEVIIEKA--NAAP 70 D + N S K QLA + AV ++ KI+AL I+ + Sbjct: 871 DAEEFNKSKIEILSYITKLRQLALDPAVTIND----YMGESAKIEALVEILNQGIEEGHK 926 Query: 71 IIVAYHFNSDLARLQKAFPQGRTL----------DKDPCTIQEWNEGKIPLLFAHPASCG 120 I+V F S L + + + K + E+NEG+ + + G Sbjct: 927 ILVFSQFTSVLKNISSRLKEEKISFSYLDGSVSSKKRINMVNEFNEGENSVFLISLKAGG 986 Query: 121 HGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELV 180 GLNL +I++ F WW+ Q +R + G K V V LIA+ TI+E V Sbjct: 987 TGLNLT-SADIVIHFDPWWNPAVENQATDR-----AHRMGQKNVVEVIKLIAKGTIEEKV 1040 Query: 181 LQRLRTKSTIQDLLLN 196 + K + ++ Sbjct: 1041 VALQEEKKELISKIIE 1056 >gi|120611497|ref|YP_971175.1| SNF2-like protein [Acidovorax citrulli AAC00-1] gi|120589961|gb|ABM33401.1| SNF2-related protein [Acidovorax citrulli AAC00-1] Length = 991 Score = 137 bits (346), Expect = 8e-31, Method: Composition-based stats. Identities = 41/207 (19%), Positives = 78/207 (37%), Gaps = 28/207 (13%) Query: 5 HKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIE 64 +R+ + +G I ++ +K Q+ + K+ L ++ Sbjct: 746 RVLERQGF---EGGLITILDA---LLKLRQVCCDPRLVKGLPDASGMESAKLDRLAELLP 799 Query: 65 K--ANAAPIIVAYHFNSDLA---------RLQKAFPQGRTLDKDPC-TIQEWN----EGK 108 A ++V F L RL G T + ++ + EG Sbjct: 800 PLVAEGRRVLVFSQFTGMLDLAGQRLDALRLPWLALTGATAPRQRASVVRRFQDPSAEGS 859 Query: 109 IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVY 168 P+L A + G GLNL + ++ WW+ +Q R + G R VF++ Sbjct: 860 APILLASLKAGGTGLNLT-AADTVIHLDPWWNPAVMEQASAR-----AHRIGQDRPVFIH 913 Query: 169 YLIAQNTIDELVLQRLRTKSTIQDLLL 195 +L+A+ +I+E +L+ K + D +L Sbjct: 914 HLVAEGSIEERMLELQARKQALADGVL 940 >gi|228964841|ref|ZP_04125946.1| Helicase, SWF/SNF [Bacillus thuringiensis serovar sotto str. T04001] gi|228794779|gb|EEM42280.1| Helicase, SWF/SNF [Bacillus thuringiensis serovar sotto str. T04001] Length = 1064 Score = 137 bits (345), Expect = 8e-31, Method: Composition-based stats. Identities = 43/206 (20%), Positives = 81/206 (39%), Gaps = 25/206 (12%) Query: 6 KFQRELYCDLQGENI--EAFNSASKTVKCLQLANG-AVYYDEEKHWKEVHDEKIKALEVI 62 K + E L + + + + Q+ A++ D+ K K + L I Sbjct: 849 KLREETLKHLDKDTLRKNKIRILAGLTRLRQICCHPALFVDDYK----GSSAKFEQLLEI 904 Query: 63 IEK--ANAAPIIVAYHFNSDL---------ARLQKAFPQGRTLDKDPCTI-QEWNEGKIP 110 +E+ + I++ F L + + G T ++ + +NEG+ Sbjct: 905 LEECRSTGKRILIFSQFTKMLSIIGRELNRQAIPYFYLDGSTPAQERVELCDRFNEGEGD 964 Query: 111 LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYL 170 L + G GLNL G + ++ + LWW+ QQ +R + G K V V L Sbjct: 965 LFLISLKAGGTGLNLT-GADTVILYDLWWNPAVEQQAADR-----AYRMGQKNTVQVIKL 1018 Query: 171 IAQNTIDELVLQRLRTKSTIQDLLLN 196 +AQ TI+E + + +K + ++ Sbjct: 1019 VAQGTIEEKMHELQESKKNLIAEVIE 1044 >gi|229069404|ref|ZP_04202693.1| Helicase, SWF/SNF [Bacillus cereus F65185] gi|228713543|gb|EEL65429.1| Helicase, SWF/SNF [Bacillus cereus F65185] Length = 1064 Score = 137 bits (345), Expect = 8e-31, Method: Composition-based stats. Identities = 43/206 (20%), Positives = 81/206 (39%), Gaps = 25/206 (12%) Query: 6 KFQRELYCDLQGENI--EAFNSASKTVKCLQLANG-AVYYDEEKHWKEVHDEKIKALEVI 62 K + E L + + + + Q+ A++ D+ K K + L I Sbjct: 849 KLREETLKHLDKDTLRKNKIRILAGLTRLRQICCHPALFVDDYK----GSSAKFEQLLEI 904 Query: 63 IEK--ANAAPIIVAYHFNSDL---------ARLQKAFPQGRTLDKDPCTI-QEWNEGKIP 110 +E+ + I++ F L + + G T ++ + +NEG+ Sbjct: 905 LEECRSTGKRILIFSQFTKMLSIIGRELNRQAIPYFYLDGSTPAQERVELCDRFNEGEGD 964 Query: 111 LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYL 170 L + G GLNL G + ++ + LWW+ QQ +R + G K V V L Sbjct: 965 LFLISLKAGGTGLNLT-GADTVILYDLWWNPAVEQQAADR-----AYRMGQKNTVQVIKL 1018 Query: 171 IAQNTIDELVLQRLRTKSTIQDLLLN 196 +AQ TI+E + + +K + ++ Sbjct: 1019 VAQGTIEEKMHELQESKKNLIAEVIE 1044 >gi|282857036|ref|ZP_06266287.1| helicase, SNF2/RAD54 family [Pyramidobacter piscolens W5455] gi|282585197|gb|EFB90514.1| helicase, SNF2/RAD54 family [Pyramidobacter piscolens W5455] Length = 1419 Score = 137 bits (345), Expect = 9e-31, Method: Composition-based stats. Identities = 41/215 (19%), Positives = 82/215 (38%), Gaps = 32/215 (14%) Query: 8 QRELYCDLQGENIEAFNSA-------------SKTVKCLQLANGAVYYDEEKHWKEVHDE 54 +R Y L+ +EA ++A ++ +K + AV + + Sbjct: 1192 ERAFYEALRQSAVEAIDAAGNSPEEDKRFAVFAQLMKLRRCCC-AVSLVSDGVGAAIPSS 1250 Query: 55 KIKALEVIIEKA--NAAPIIVAYHFNSDLARLQKAFPQGRTL----------DKDPCTIQ 102 K++AL ++++ + +V F L +++A + K + Sbjct: 1251 KLEALLELVDELRESGHRALVFSQFTDHLRLIERALAERGVPCLYLDGSTPPGKRAELVS 1310 Query: 103 EWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFK 162 + G+ + G GLNL G + +V WW+ Q +R + G Sbjct: 1311 SFQSGRGDCFLISLRAGGTGLNLT-GADFVVHMDPWWNPAVEDQASDR-----AYRIGQT 1364 Query: 163 RAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 R V VY +A +T++E +++ R K + + LL Sbjct: 1365 RPVTVYRFVAAHTVEEKIVELHRRKRGLAESLLAG 1399 >gi|289768102|ref|ZP_06527480.1| helicase [Streptomyces lividans TK24] gi|289698301|gb|EFD65730.1| helicase [Streptomyces lividans TK24] Length = 974 Score = 137 bits (345), Expect = 9e-31, Method: Composition-based stats. Identities = 37/214 (17%), Positives = 77/214 (35%), Gaps = 26/214 (12%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASK--TVKCLQLANGAVYYDEEKHWKEVHDE----- 54 Y RE ++ Q+ + + +E+H D Sbjct: 742 ALYEAVVRESMLAIEEAEGIGRRGLVLKLLTSLKQICDHPALFLKEEHPPGGTDRMTARS 801 Query: 55 -KIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFP----------QGRTLDKDPCTI 101 K+ L+ +++ A ++V + + G + + + Sbjct: 802 GKLALLDELLDTVLAEDGSVLVFTQYVGMARLITSHLAARAVPVDLLHGGTPVPERERMV 861 Query: 102 QEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGF 161 + G P+L + G GLNL G+ +V F WW+ +Q +R + G Sbjct: 862 DRFQSGATPVLVLSLKAAGTGLNLTRAGH-VVHFDRWWNPAVEEQATDR-----AYRIGQ 915 Query: 162 KRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 + V V+ LI + T+++ + + L++K + D +L Sbjct: 916 TQPVQVHRLITEGTVEDRIAEMLQSKRALADAIL 949 >gi|256784218|ref|ZP_05522649.1| helicase [Streptomyces lividans TK24] Length = 979 Score = 137 bits (345), Expect = 9e-31, Method: Composition-based stats. Identities = 37/214 (17%), Positives = 77/214 (35%), Gaps = 26/214 (12%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASK--TVKCLQLANGAVYYDEEKHWKEVHDE----- 54 Y RE ++ Q+ + + +E+H D Sbjct: 747 ALYEAVVRESMLAIEEAEGIGRRGLVLKLLTSLKQICDHPALFLKEEHPPGGTDRMTARS 806 Query: 55 -KIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFP----------QGRTLDKDPCTI 101 K+ L+ +++ A ++V + + G + + + Sbjct: 807 GKLALLDELLDTVLAEDGSVLVFTQYVGMARLITSHLAARAVPVDLLHGGTPVPERERMV 866 Query: 102 QEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGF 161 + G P+L + G GLNL G+ +V F WW+ +Q +R + G Sbjct: 867 DRFQSGATPVLVLSLKAAGTGLNLTRAGH-VVHFDRWWNPAVEEQATDR-----AYRIGQ 920 Query: 162 KRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 + V V+ LI + T+++ + + L++K + D +L Sbjct: 921 TQPVQVHRLITEGTVEDRIAEMLQSKRALADAIL 954 >gi|229178258|ref|ZP_04305628.1| Helicase, SWF/SNF [Bacillus cereus 172560W] gi|228605137|gb|EEK62588.1| Helicase, SWF/SNF [Bacillus cereus 172560W] Length = 1064 Score = 137 bits (345), Expect = 9e-31, Method: Composition-based stats. Identities = 43/206 (20%), Positives = 81/206 (39%), Gaps = 25/206 (12%) Query: 6 KFQRELYCDLQGENI--EAFNSASKTVKCLQLANG-AVYYDEEKHWKEVHDEKIKALEVI 62 K + E L + + + + Q+ A++ D+ K K + L I Sbjct: 849 KLREETLKHLDKDTLRKNKIRILAGLTRLRQICCHPALFVDDYK----GSSAKFEQLLEI 904 Query: 63 IEK--ANAAPIIVAYHFNSDL---------ARLQKAFPQGRTLDKDPCTI-QEWNEGKIP 110 +E+ + I++ F L + + G T ++ + +NEG+ Sbjct: 905 LEECRSTGKRILIFSQFTKMLSIIGRELNRQAIPYFYLDGSTPVQERVELCDRFNEGEGD 964 Query: 111 LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYL 170 L + G GLNL G + ++ + LWW+ QQ +R + G K V V L Sbjct: 965 LFLISLKAGGTGLNLT-GADTVILYDLWWNPAVEQQAADR-----AYRMGQKNTVQVIKL 1018 Query: 171 IAQNTIDELVLQRLRTKSTIQDLLLN 196 +AQ TI+E + + +K + ++ Sbjct: 1019 VAQGTIEEKMHELQESKKNLIAEVIE 1044 >gi|21224583|ref|NP_630362.1| helicase [Streptomyces coelicolor A3(2)] gi|6273667|emb|CAB60181.1| putative helicase [Streptomyces coelicolor A3(2)] Length = 977 Score = 137 bits (345), Expect = 9e-31, Method: Composition-based stats. Identities = 37/214 (17%), Positives = 77/214 (35%), Gaps = 26/214 (12%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASK--TVKCLQLANGAVYYDEEKHWKEVHDE----- 54 Y RE ++ Q+ + + +E+H D Sbjct: 745 ALYEAVVRESMLAIEEAEGIGRRGLVLKLLTSLKQICDHPALFLKEEHPPGGTDRMTARS 804 Query: 55 -KIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFP----------QGRTLDKDPCTI 101 K+ L+ +++ A ++V + + G + + + Sbjct: 805 GKLALLDELLDTVLAEDGSVLVFTQYVGMARLITSHLAARAVPVDLLHGGTPVPERERMV 864 Query: 102 QEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGF 161 + G P+L + G GLNL G+ +V F WW+ +Q +R + G Sbjct: 865 DRFQSGATPVLVLSLKAAGTGLNLTRAGH-VVHFDRWWNPAVEEQATDR-----AYRIGQ 918 Query: 162 KRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 + V V+ LI + T+++ + + L++K + D +L Sbjct: 919 TQPVQVHRLITEGTVEDRIAEMLQSKRALADAIL 952 >gi|313618637|gb|EFR90589.1| SNF2 family helicase [Listeria innocua FSL S4-378] Length = 208 Score = 137 bits (345), Expect = 9e-31, Method: Composition-based stats. Identities = 40/183 (21%), Positives = 74/183 (40%), Gaps = 21/183 (11%) Query: 26 ASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLAR 83 + + Q+ + E + K+ L I+ A N I++ F LA Sbjct: 8 LAGLTRLRQICCDPSLFVEN---YQGESGKLLQLFDTIQTARENGKRILIFSQFTGMLAI 64 Query: 84 LQKAFPQ---------GRTLDKDPCT-IQEWNEGKIPLLFAHPASCGHGLNLQYGGNILV 133 +++ + G+T K + +NEG+ + + G GLNL G + ++ Sbjct: 65 IRRKLEEDGQPLFYMDGKTPAKTRLDMVNAFNEGENDIFLISLKAGGTGLNL-VGADTVI 123 Query: 134 FFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDL 193 + LWW+ +Q R + G KR V V+ +I + TI+E + + K + D Sbjct: 124 LYDLWWNPAVEEQATGR-----AHRIGQKRVVQVFRMITKGTIEERIFDLQKKKQALVDE 178 Query: 194 LLN 196 L+ Sbjct: 179 LIQ 181 >gi|108763874|ref|YP_633501.1| SNF2/helicase domain-containing protein [Myxococcus xanthus DK 1622] gi|108467754|gb|ABF92939.1| SNF2/helicase domain protein [Myxococcus xanthus DK 1622] Length = 1083 Score = 137 bits (345), Expect = 1e-30, Method: Composition-based stats. Identities = 39/186 (20%), Positives = 67/186 (36%), Gaps = 17/186 (9%) Query: 23 FNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSD 80 + + ++ Q+ K++ ++E A +V F Sbjct: 883 VSILAALMRLRQVCCDPRLLKMPPGTLMPPSAKVERFLQLVEDLVAEGHRALVFSQFTEM 942 Query: 81 LARLQK---------AFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNI 131 L L++ + GRT D+ + N PL F + G GLNL + Sbjct: 943 LELLKQEADKKGLRYLYLDGRTKDRMGKVDEYNNPDGPPLFFISLKAGGTGLNLT-AADY 1001 Query: 132 LVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQ 191 ++ F WW+ Q +R + G RAV Y LI + T++E +L R K + Sbjct: 1002 VIHFDPWWNPAVEDQATDR-----THRIGQTRAVISYKLITRGTVEEKILALQRRKRELA 1056 Query: 192 DLLLNA 197 +L Sbjct: 1057 AGVLGG 1062 >gi|228900434|ref|ZP_04064661.1| Helicase, SWF/SNF [Bacillus thuringiensis IBL 4222] gi|228859174|gb|EEN03607.1| Helicase, SWF/SNF [Bacillus thuringiensis IBL 4222] Length = 1064 Score = 137 bits (345), Expect = 1e-30, Method: Composition-based stats. Identities = 43/206 (20%), Positives = 81/206 (39%), Gaps = 25/206 (12%) Query: 6 KFQRELYCDLQGENI--EAFNSASKTVKCLQLANG-AVYYDEEKHWKEVHDEKIKALEVI 62 K + E L + + + + Q+ A++ D+ K K + L I Sbjct: 849 KLREETLKHLDKDTLRKNKIRILAGLTRLRQICCHPALFVDDYK----GSSAKFEQLLEI 904 Query: 63 IEK--ANAAPIIVAYHFNSDL---------ARLQKAFPQGRTLDKDPCTI-QEWNEGKIP 110 +E+ + I++ F L + + G T ++ + +NEG+ Sbjct: 905 LEECRSTGKRILIFSQFTKMLSIIGRELNRQAIPYFYLDGSTPAQERVELCDRFNEGEGE 964 Query: 111 LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYL 170 L + G GLNL G + ++ + LWW+ QQ +R + G K V V L Sbjct: 965 LFLISLKAGGTGLNLT-GADTVILYDLWWNPAVEQQAADR-----AYRMGQKNTVQVIKL 1018 Query: 171 IAQNTIDELVLQRLRTKSTIQDLLLN 196 +AQ TI+E + + +K + ++ Sbjct: 1019 VAQGTIEEKMHELQESKKNLIAEVIE 1044 >gi|149177854|ref|ZP_01856453.1| Snf2 family protein [Planctomyces maris DSM 8797] gi|148843344|gb|EDL57708.1| Snf2 family protein [Planctomyces maris DSM 8797] Length = 1110 Score = 137 bits (345), Expect = 1e-30, Method: Composition-based stats. Identities = 41/213 (19%), Positives = 76/213 (35%), Gaps = 29/213 (13%) Query: 3 QYHKFQ---RELYCDLQGEN---IEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKI 56 Y + + R+ + + ++ Q A D + K+ Sbjct: 889 LYDELRQHYRDSILGMVESKGLGKTKIHVLEALLRLRQAACHPALLDRGR--ALDASAKM 946 Query: 57 KAL----EVIIEKANAAPIIVAYHFNSDLARLQKAFPQ---------GRTLDKDPCTIQE 103 L E +IE+ +V F S L+ +Q+ Q G+T D+ + Sbjct: 947 DVLIPHLEELIEE--GHKALVFSQFTSMLSIVQEHLDQKNIVYEYLDGQTRDRKERVDRF 1004 Query: 104 WNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKR 163 + + + G GLNL + + WW+ Q I+R + G + Sbjct: 1005 QTDKDCGVFLISLKAGGLGLNLT-AADYVFILDPWWNPAVETQAIDR-----AHRVGQTK 1058 Query: 164 AVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 VF Y LI +NT++E + + + K + D +L Sbjct: 1059 RVFAYKLICRNTVEEKITELQQQKRELADAILE 1091 >gi|169342801|ref|ZP_02863835.1| helicase, SNF2/RAD54 family [Clostridium perfringens C str. JGS1495] gi|169299058|gb|EDS81130.1| helicase, SNF2/RAD54 family [Clostridium perfringens C str. JGS1495] Length = 1084 Score = 137 bits (345), Expect = 1e-30, Method: Composition-based stats. Identities = 46/196 (23%), Positives = 74/196 (37%), Gaps = 23/196 (11%) Query: 14 DLQGENIEAFNSASKTVKCLQLA-NGAVYYDEEKHWKEVHDEKIKALEVIIEKA--NAAP 70 D + N S K QLA + AV ++ KI+ L I+ + Sbjct: 871 DAEEFNKSKIEILSYITKLRQLALDPAVTIND----YMGESAKIEVLVEILNQGIEEGHK 926 Query: 71 IIVAYHFNSDLARLQKAFPQGRTL----------DKDPCTIQEWNEGKIPLLFAHPASCG 120 I+V F S L + + + K + E+NEG+ + + G Sbjct: 927 ILVFSQFTSVLKNISSRLKEEKISFSYLDGSVSSKKRINMVNEFNEGENSVFLISLKAGG 986 Query: 121 HGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELV 180 GLNL +I++ F WW+ Q +R + G K V V LIA+ TI+E V Sbjct: 987 TGLNLT-SADIVIHFDPWWNPAVENQATDR-----AHRIGQKNVVEVIKLIAKGTIEEKV 1040 Query: 181 LQRLRTKSTIQDLLLN 196 + K + ++ Sbjct: 1041 VALQEEKKELISKIIE 1056 >gi|186686080|ref|YP_001869276.1| SNF2-related protein [Nostoc punctiforme PCC 73102] gi|186468532|gb|ACC84333.1| SNF2-related protein [Nostoc punctiforme PCC 73102] Length = 1403 Score = 137 bits (345), Expect = 1e-30, Method: Composition-based stats. Identities = 36/212 (16%), Positives = 75/212 (35%), Gaps = 25/212 (11%) Query: 4 YHKFQRELYCDLQGENIEA----FNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKAL 59 Y +R+ L + EA ++ +K + E+ K++ Sbjct: 1184 YEALRRQAISKLTESDAEAGKKHLQVLAEIMKLRRACCNPSLVMPG---TELPSSKLQLF 1240 Query: 60 EVIIEKA--NAAPIIVAYHFNSDLARLQKAFPQGRT----------LDKDPCTIQEWNEG 107 ++ + N +V F L ++ Q + + + + G Sbjct: 1241 GEVLGELLENRHKALVFSQFVDHLHIIRDYLEQQGINYQYLDGSTSVAERKKRVDAFQAG 1300 Query: 108 KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFV 167 + + G GLNL + ++ WW+ Q +R + G +R V + Sbjct: 1301 SGDVFLISLKAGGTGLNLT-AADYVIHTDPWWNPAVEDQASDR-----AHRIGQQRPVTI 1354 Query: 168 YYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 Y L+A++TI+E +++ K + D LL + Sbjct: 1355 YRLVAKDTIEEKIVELHHHKRDLADSLLEGTE 1386 >gi|150388431|ref|YP_001318480.1| non-specific serine/threonine protein kinase [Alkaliphilus metalliredigens QYMF] gi|149948293|gb|ABR46821.1| Non-specific serine/threonine protein kinase [Alkaliphilus metalliredigens QYMF] Length = 1141 Score = 137 bits (345), Expect = 1e-30, Method: Composition-based stats. Identities = 38/183 (20%), Positives = 71/183 (38%), Gaps = 21/183 (11%) Query: 26 ASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLAR 83 + + Q+ + E E K+ LE ++ + I++ F S L Sbjct: 949 LAGLTRLRQICCHPSLFVEN---YEGGSGKLDLLEEVVAASLEAGHRILLFSQFTSMLKM 1005 Query: 84 LQKAFPQ----------GRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILV 133 +++ Q ++ ++E+NEGK + + G GLNL G + ++ Sbjct: 1006 IREKLDQQGIEYAYLDGSTPMEARGEIVKEFNEGKGSIFLISLKAGGTGLNLT-GADTVI 1064 Query: 134 FFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDL 193 F WW+ Q +R + G K V V IAQ TI+E + + K + + Sbjct: 1065 HFDPWWNPAVEDQATDR-----AYRIGQKNKVHVMKFIAQGTIEEKIFKLQERKKEMINA 1119 Query: 194 LLN 196 ++ Sbjct: 1120 VIQ 1122 >gi|218896786|ref|YP_002445197.1| putative helicase [Bacillus cereus G9842] gi|218540700|gb|ACK93094.1| putative helicase [Bacillus cereus G9842] Length = 1064 Score = 136 bits (344), Expect = 1e-30, Method: Composition-based stats. Identities = 43/206 (20%), Positives = 81/206 (39%), Gaps = 25/206 (12%) Query: 6 KFQRELYCDLQGENI--EAFNSASKTVKCLQLANG-AVYYDEEKHWKEVHDEKIKALEVI 62 K + E L + + + + Q+ A++ D+ K K + L I Sbjct: 849 KLREETLKHLDKDTLRKNKIRILAGLTRLRQICCHPALFVDDYK----GSSAKFEQLLEI 904 Query: 63 IEK--ANAAPIIVAYHFNSDL---------ARLQKAFPQGRTLDKDPCTI-QEWNEGKIP 110 +E+ + I++ F L + + G T ++ + +NEG+ Sbjct: 905 LEECRSTGKRILIFSQFTKMLSIIGRELNRQAIPYFYLDGSTPAQERVELCDRFNEGEGE 964 Query: 111 LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYL 170 L + G GLNL G + ++ + LWW+ QQ +R + G K V V L Sbjct: 965 LFLISLKAGGTGLNLT-GADTVILYDLWWNPAVEQQAADR-----AYRMGQKNTVQVIKL 1018 Query: 171 IAQNTIDELVLQRLRTKSTIQDLLLN 196 +AQ TI+E + + +K + ++ Sbjct: 1019 VAQGTIEEKMHELQESKKNLIAEVIE 1044 >gi|111018652|ref|YP_701624.1| helicase [Rhodococcus jostii RHA1] gi|110818182|gb|ABG93466.1| probable helicase [Rhodococcus jostii RHA1] Length = 1070 Score = 136 bits (344), Expect = 1e-30, Method: Composition-based stats. Identities = 45/210 (21%), Positives = 79/210 (37%), Gaps = 22/210 (10%) Query: 2 KQYH---KFQRELYCDLQGE-NIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIK 57 K Y + +R+ L + + F QL+ A D E + +V K+ Sbjct: 851 KVYDTHLQRERQKILGLLADVDKNRFTILQSLTLLRQLSLDAGLVDAE--YHDVPSAKVD 908 Query: 58 ALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTLD--------KDPCTIQEWNEG 107 AL + A +V F L +++ + ++E+ EG Sbjct: 909 ALLEQLADVVAGGHRALVFSQFTGFLGKIRDRLADAGIAHSYLDGSTRRRGDVLREFKEG 968 Query: 108 KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFV 167 P+ + G GLNL + WW+ Q ++R + G R V V Sbjct: 969 AAPVFLISLKAGGFGLNLTEADYCFIL-DPWWNPATEAQAVDR-----AHRIGQTRNVMV 1022 Query: 168 YYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 Y LIA++TI++ V+ KS + +++A Sbjct: 1023 YRLIAKDTIEDKVMALKAKKSALFASVMDA 1052 >gi|326203945|ref|ZP_08193807.1| SNF2 helicase associated domain protein [Clostridium papyrosolvens DSM 2782] gi|325986043|gb|EGD46877.1| SNF2 helicase associated domain protein [Clostridium papyrosolvens DSM 2782] Length = 1077 Score = 136 bits (344), Expect = 1e-30, Method: Composition-based stats. Identities = 38/214 (17%), Positives = 81/214 (37%), Gaps = 27/214 (12%) Query: 2 KQY----HKFQRELYCDLQ--GENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEK 55 K Y + + +++ ++ G S + QL + + E K Sbjct: 854 KLYIAYLEQAKGDIFKEINQNGYERSQIKILSVLTRLRQLCCHPALFVDN---YEGDSGK 910 Query: 56 IKALEVIIEKA--NAAPIIVAYHFNSDLARLQK----------AFPQGRTLDKDPCTIQE 103 + L+ I+ + + I++ F S LA +++ ++ ++ Sbjct: 911 LLLLKEIVVDSLTSGHRILLFSQFTSMLAIIRQWLQEDGVDYLYLDGSTPAEERMKMVKN 970 Query: 104 WNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKR 163 +N G+ + S G GLNL G + ++ + WW+ Q +R + G + Sbjct: 971 FNNGQGQIFLLSLKSGGTGLNLT-GADTVIHYDPWWNPAVEDQATDR-----AYRIGQLK 1024 Query: 164 AVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 V V L+ TI+E +L+ K + D ++ + Sbjct: 1025 TVHVMKLVTHGTIEEKILRLKDRKKQLVDAVIQS 1058 >gi|302549833|ref|ZP_07302175.1| SNF2/RAD54 family helicase [Streptomyces viridochromogenes DSM 40736] gi|302467451|gb|EFL30544.1| SNF2/RAD54 family helicase [Streptomyces viridochromogenes DSM 40736] Length = 948 Score = 136 bits (344), Expect = 1e-30, Method: Composition-based stats. Identities = 44/214 (20%), Positives = 86/214 (40%), Gaps = 23/214 (10%) Query: 3 QYHKFQRELYCDLQGENIEAFNSA--SKTVKCLQLANG-AVYYDEEKHWKEVHDEKIKAL 59 Y RE ++ G A Q+ N A Y EE+ K++ L Sbjct: 721 LYEAVVREALAEISGAGSMARRGLIVKLLTGLKQICNHPAQYLKEERPVIAGRSGKLELL 780 Query: 60 EVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGR-----------TLDKDPCTIQEWNE 106 + +++ A A ++V + ARL + GR + + ++ + + Sbjct: 781 DELLDTILAERAGVLVFTQYVRM-ARLLERHLAGRGTPSQFLHGGTPVAEREAMVRRFQD 839 Query: 107 GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVF 166 G++P+ + G GLNL + +V + WW+ Q +R + G R V Sbjct: 840 GEVPVFLLSLKAAGTGLNLTRAEH-VVHYDRWWNPAVEAQATDR-----AYRIGQTRPVQ 893 Query: 167 VYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKK 200 V+ ++A+ TI++ + + L K + D +L + + Sbjct: 894 VHRIVAEGTIEDRIAELLTRKRALADAVLGSGEA 927 >gi|196041238|ref|ZP_03108533.1| putative helicase [Bacillus cereus NVH0597-99] gi|196027946|gb|EDX66558.1| putative helicase [Bacillus cereus NVH0597-99] Length = 1064 Score = 136 bits (344), Expect = 1e-30, Method: Composition-based stats. Identities = 43/206 (20%), Positives = 81/206 (39%), Gaps = 25/206 (12%) Query: 6 KFQRELYCDLQGENI--EAFNSASKTVKCLQLANG-AVYYDEEKHWKEVHDEKIKALEVI 62 K + E L + + + + Q+ A++ D+ K K + L I Sbjct: 849 KLREETLKHLDKDTLRKNKIRILAGLTRLRQICCHPALFVDDYK----GSSAKFEQLLDI 904 Query: 63 IEK--ANAAPIIVAYHFNSDLARL-----QKAFPQGRTLDKDPCTIQ-----EWNEGKIP 110 +E+ + I++ F L+ + ++A P P + +NEG+ Sbjct: 905 LEECRSTGKRILIFSQFTKMLSIIGRELNRQAIPYFYLDGNTPSQERVELCNRFNEGEGD 964 Query: 111 LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYL 170 L + G GLNL G + ++ + LWW+ QQ +R + G K V V L Sbjct: 965 LFLISLKAGGTGLNLT-GADTVILYDLWWNPAVEQQAADR-----AYRMGQKNTVQVIKL 1018 Query: 171 IAQNTIDELVLQRLRTKSTIQDLLLN 196 +A TI+E + + +K + ++ Sbjct: 1019 VAHGTIEEKMYELQESKKNLIAEVIE 1044 >gi|290466810|gb|ADD25740.1| putative helicase [Lactococcus phage 1358] Length = 577 Score = 136 bits (344), Expect = 1e-30, Method: Composition-based stats. Identities = 57/207 (27%), Positives = 91/207 (43%), Gaps = 37/207 (17%) Query: 19 NIEAFNSASKTVKCLQLANGAVYYD-------------------EEKHWKEVHDEKIKAL 59 I + S QLA+GA+Y + + EVHD K+ AL Sbjct: 331 KITTEHIFSVINALRQLASGAIYEQLDTTGLDEEEIAERYNEHMKNRKHIEVHDAKLDAL 390 Query: 60 EVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD--PCTIQEWNEGKIPLLFAHPA 117 IIE+ + V + + R+++ F R L+ + WN GKIP+L A+PA Sbjct: 391 ADIIEREQD-NVFVFVSYKHEAERIRQRFEGVRFLNTANAAEVLPLWNAGKIPVLVANPA 449 Query: 118 SCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYL------I 171 S GLN+Q GG+ +V++S+ + E Q R+ + G K V VY L I Sbjct: 450 STKFGLNMQDGGHTIVWYSMGYSFEAFTQSNARLA-----RQGQKHEVKVYMLQSWLAPI 504 Query: 172 AQNTIDELVLQRLRTKSTIQDLLLNAL 198 +T E +++ TI +++A+ Sbjct: 505 QDDTQLEDIMRAQ----TIDSAIMDAI 527 >gi|229017133|ref|ZP_04174048.1| Helicase, SWF/SNF [Bacillus cereus AH1273] gi|229023310|ref|ZP_04179819.1| Helicase, SWF/SNF [Bacillus cereus AH1272] gi|228738015|gb|EEL88502.1| Helicase, SWF/SNF [Bacillus cereus AH1272] gi|228744153|gb|EEL94240.1| Helicase, SWF/SNF [Bacillus cereus AH1273] Length = 1064 Score = 136 bits (344), Expect = 1e-30, Method: Composition-based stats. Identities = 44/211 (20%), Positives = 83/211 (39%), Gaps = 25/211 (11%) Query: 6 KFQRELYCDLQGENI--EAFNSASKTVKCLQLANG-AVYYDEEKHWKEVHDEKIKALEVI 62 K + E L + + + + Q+ A++ D+ K K L I Sbjct: 849 KLREETLKHLDKDTLRKNKIRVLAGLTRLRQICCHPALFVDDYK----GSSAKFDQLLEI 904 Query: 63 IEK--ANAAPIIVAYHFNSDLARL-----QKAFPQGRTLDKDPCTIQ-----EWNEGKIP 110 +E+ + I++ F L+ + ++A P P + +NEG+ Sbjct: 905 LEECRSTGKRILIFSQFTKMLSIIGRELNRQAVPYFYLDGSTPAQERVELCNRFNEGEGD 964 Query: 111 LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYL 170 L + G GLNL G + ++ + LWW+ QQ +R + G K V V L Sbjct: 965 LFLISLKAGGTGLNLT-GADTVILYDLWWNPAVEQQAADR-----AYRMGQKNTVQVIKL 1018 Query: 171 IAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 +A TI+E + + +K + ++ K++ Sbjct: 1019 VAHGTIEEKMHELQESKKNLIAEIIEPGKEK 1049 >gi|115378604|ref|ZP_01465757.1| Snf2 family protein [Stigmatella aurantiaca DW4/3-1] gi|115364391|gb|EAU63473.1| Snf2 family protein [Stigmatella aurantiaca DW4/3-1] Length = 1130 Score = 136 bits (344), Expect = 1e-30, Method: Composition-based stats. Identities = 37/185 (20%), Positives = 70/185 (37%), Gaps = 19/185 (10%) Query: 23 FNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSD 80 + + ++ Q+ + K++ +++ A +V F Sbjct: 931 VSILAALMRLRQVCCDPRLLKLPPNTLLPSSAKLERFGQLVDDLVAEGHRALVFSQFTEM 990 Query: 81 LARLQ---------KAFPQGRTLDKDPCTIQEWNEGK-IPLLFAHPASCGHGLNLQYGGN 130 L L+ + GRT D+ + ++N + PL F + G GLNL + Sbjct: 991 LELLKTEADKRGLNYLYLDGRTKDRMAK-VDDFNRPEGPPLFFISLKAGGTGLNLT-AAD 1048 Query: 131 ILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 ++ + WW+ Q +R + G RAV Y LI + T++E +L R K + Sbjct: 1049 YVIHYDPWWNPAVEDQATDR-----THRIGQTRAVISYKLITRGTVEEKILSLQRRKKEL 1103 Query: 191 QDLLL 195 +L Sbjct: 1104 AAGVL 1108 >gi|134301077|ref|YP_001114573.1| SNF2 helicase associated domain-containing protein [Desulfotomaculum reducens MI-1] gi|134053777|gb|ABO51748.1| SNF2 helicase associated domain protein [Desulfotomaculum reducens MI-1] Length = 1084 Score = 136 bits (344), Expect = 1e-30, Method: Composition-based stats. Identities = 45/209 (21%), Positives = 79/209 (37%), Gaps = 23/209 (11%) Query: 1 MKQYHKFQREL--YCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKA 58 + K ++E ++G + + QL + E K++ Sbjct: 864 LAYLEKIRQETKDALQIEGFEKSRIKILAGLTRLRQLCCHPSLFLEN---YSGQSGKLEQ 920 Query: 59 LEVIIEKA--NAAPIIVAYHFNSDLARLQKAFP---------QGRTLDKDP-CTIQEWNE 106 L IIE N ++V F S L + + G+T KD Q +N Sbjct: 921 LMEIIENTLENKRRLLVFSQFASMLGIICEELDRLNKSYFYLDGQTPAKDRVEMTQRFNN 980 Query: 107 GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVF 166 G+ L + G GLNL G + ++ + LWW+ +Q R + G K V Sbjct: 981 GEKDLFLISLKAGGTGLNLT-GADTVILYDLWWNPAIEEQAAGR-----AHRMGQKNCVQ 1034 Query: 167 VYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 V LI + TI+E + + + K + + ++ Sbjct: 1035 VIKLITKGTIEEKIYEMQQQKKELIEQVI 1063 >gi|15896248|ref|NP_349597.1| SNF2 family DNA/RNA helicase [Clostridium acetobutylicum ATCC 824] gi|15026052|gb|AAK80937.1|AE007796_7 Superfamily II DNA/RNA helicase, SNF2 family [Clostridium acetobutylicum ATCC 824] gi|325510403|gb|ADZ22039.1| Superfamily II DNA/RNA helicase, SNF2 family [Clostridium acetobutylicum EA 2018] Length = 1052 Score = 136 bits (344), Expect = 1e-30, Method: Composition-based stats. Identities = 46/181 (25%), Positives = 75/181 (41%), Gaps = 21/181 (11%) Query: 27 SKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARL 84 S + Q+ + E + K + K+ L I+ AN I+V F S L + Sbjct: 857 SLLTRLRQICSNPRTVVENYNGK---NAKMDVLMDTIKTSIANRHRILVFSQFTSVLKSI 913 Query: 85 QK---------AFPQGRTLDKDP-CTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVF 134 + + G T KD E+N+GK + + G GLNL G +I+V Sbjct: 914 KDKLIEKDIDVMYLDGNTKMKDRFQLADEFNKGKGEVFLISLKAGGTGLNLT-GADIVVH 972 Query: 135 FSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 F WW+ Q +R + G K+ V + LI + TI+E + + + K + D + Sbjct: 973 FDPWWNPAVENQASDR-----AHRIGQKKNVEIIKLITRGTIEEKIYKLQQEKKKMVDNV 1027 Query: 195 L 195 L Sbjct: 1028 L 1028 >gi|168213595|ref|ZP_02639220.1| helicase, SNF2/RAD54 family [Clostridium perfringens CPE str. F4969] gi|170714879|gb|EDT27061.1| helicase, SNF2/RAD54 family [Clostridium perfringens CPE str. F4969] Length = 1084 Score = 136 bits (344), Expect = 1e-30, Method: Composition-based stats. Identities = 45/197 (22%), Positives = 71/197 (36%), Gaps = 25/197 (12%) Query: 14 DLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKE--VHDEKIKALEVIIEKA--NAA 69 D + N S K QLA D + K +AL I+ + Sbjct: 871 DAEEFNKSKIEILSYITKLRQLA-----LDPSVTINDYMGESAKTEALVEILNQGIEEGH 925 Query: 70 PIIVAYHFNSDLARLQKAFPQGRTL----------DKDPCTIQEWNEGKIPLLFAHPASC 119 I+V F S L + + + K + E+NEG+ + + Sbjct: 926 KILVFSQFTSVLKNISSRLKEEKISFSYLDGSVSSKKRINMVNEFNEGENSVFLISLKAG 985 Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 G GLNL +I++ F WW+ Q +R + G K V V LIA+ TI+E Sbjct: 986 GTGLNLT-SADIVIHFDPWWNPAVENQATDR-----AHRMGQKNVVEVIKLIAKGTIEEK 1039 Query: 180 VLQRLRTKSTIQDLLLN 196 V+ K + ++ Sbjct: 1040 VVALQEEKKELISKIIE 1056 >gi|226943915|ref|YP_002798988.1| DEAD box and SNF-like helicase domain-containing protein [Azotobacter vinelandii DJ] gi|226718842|gb|ACO78013.1| DEAD box and SNF-like helicase domain-containing protein [Azotobacter vinelandii DJ] Length = 1357 Score = 136 bits (343), Expect = 1e-30, Method: Composition-based stats. Identities = 36/210 (17%), Positives = 74/210 (35%), Gaps = 24/210 (11%) Query: 3 QYHKFQRELYCDLQGENIEAFNSA---SKTVKCLQLANGAVYYDEEKHWKEVHDEKIKAL 59 Y +++ + E S ++ + + + + K+ A Sbjct: 1138 LYEAMRQQALESISQSGEEGSQSLRVLTEITRLRRFCCHPSLVLPDSD---LPGSKLAAF 1194 Query: 60 EVIIEKA--NAAPIIVAYHFNSDLARLQKAFPQGRTL----------DKDPCTIQEWNEG 107 I+E+ + +V F L+ ++K + + ++ + G Sbjct: 1195 AEIVEELLDSRHKALVFSQFVDHLSIVRKWLEERGIRYQYLDGATPAKERMARVEAFQGG 1254 Query: 108 KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFV 167 + + G GLNL + ++ WW+ Q +R + G +R V + Sbjct: 1255 DGDIFLISLKAGGTGLNLT-AADYVIHLDPWWNPAVEDQASDR-----AHRMGQQRPVTI 1308 Query: 168 YYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 Y L+A+NTI+E +L K + D LL Sbjct: 1309 YRLVAENTIEERILALHGQKRDLADSLLEG 1338 >gi|150017499|ref|YP_001309753.1| non-specific serine/threonine protein kinase [Clostridium beijerinckii NCIMB 8052] gi|149903964|gb|ABR34797.1| Non-specific serine/threonine protein kinase [Clostridium beijerinckii NCIMB 8052] Length = 1085 Score = 136 bits (343), Expect = 1e-30, Method: Composition-based stats. Identities = 41/182 (22%), Positives = 70/182 (38%), Gaps = 21/182 (11%) Query: 26 ASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLAR 83 + K Q+ + KI AL ++E++ I+V F S L Sbjct: 888 LAYITKLRQICLDPSVTMDN---YLGSSGKIDALIELLEQSIDEGHKILVFSQFTSVLKN 944 Query: 84 LQKAFPQGRTLDK----------DPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILV 133 + K + L + E+N G+ + + G GLNL +I++ Sbjct: 945 ISKILKEKNFLFSYLDGSVSSINRMKMVDEFNNGENTVFLVSLKAGGTGLNLT-SADIVI 1003 Query: 134 FFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDL 193 F WW+ Q +R + G K V V LIAQ TI+E +++ +K + + Sbjct: 1004 HFDPWWNPAVEDQATDR-----AHRIGQKNVVEVIKLIAQGTIEEKIVELQDSKRELINK 1058 Query: 194 LL 195 +L Sbjct: 1059 IL 1060 >gi|296125777|ref|YP_003633029.1| SNF2-related protein [Brachyspira murdochii DSM 12563] gi|296017593|gb|ADG70830.1| SNF2-related protein [Brachyspira murdochii DSM 12563] Length = 1031 Score = 136 bits (343), Expect = 2e-30, Method: Composition-based stats. Identities = 38/180 (21%), Positives = 70/180 (38%), Gaps = 18/180 (10%) Query: 27 SKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARL 84 S + Q+ ++ + K +I +A ++V F L + Sbjct: 839 SALTRLRQVCCHPRLMHDDLRGESHTSGKFNMFIEMIREAISGGHSVLVFSSFTRMLNLM 898 Query: 85 QKAFPQ---------GRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFF 135 + AF + G T D+ + +N G+ P+ + G GL L + ++ + Sbjct: 899 RSAFKKLGIDYFYLDGATKDRM-DLVHRFNAGEAPVFLLSLKAAGTGLTLTQ-ADTVMHY 956 Query: 136 SLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 LWW+ Q +R + G KR V Y LI + TI+E +L+ K + D ++ Sbjct: 957 DLWWNPAVEDQATDR-----AYRIGQKRVVTNYKLITRGTIEEKILELQNKKRVLIDTVV 1011 >gi|149180418|ref|ZP_01858923.1| helicase, SWF/SNF family protein [Bacillus sp. SG-1] gi|148852610|gb|EDL66755.1| helicase, SWF/SNF family protein [Bacillus sp. SG-1] Length = 1051 Score = 136 bits (343), Expect = 2e-30, Method: Composition-based stats. Identities = 35/206 (16%), Positives = 78/206 (37%), Gaps = 23/206 (11%) Query: 6 KFQRELYCDLQGENI--EAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVII 63 K + + L + + + + Q+ + + + K++ L II Sbjct: 836 KLKHDTLKHLDKDTLRKNKIKILAGITRLRQICCHPALFVDG---YQGKSAKLQQLMEII 892 Query: 64 EKAN--AAPIIVAYHFNSDL---------ARLQKAFPQGRTLDKDPCTI-QEWNEGKIPL 111 E++ +++ F L L + G T ++ + +N G+ + Sbjct: 893 EESKSSGRRVLIFSQFTRMLGLIGRELTGEGLPYFYLDGATPSEERMDLCNRYNTGERDI 952 Query: 112 LFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLI 171 + G GLNL + + ++ + WW+ QQ +R + G + V V L+ Sbjct: 953 FLISLKAGGTGLNL-HSADTVILYDTWWNPAVEQQAADR-----AHRMGQQNTVQVIRLV 1006 Query: 172 AQNTIDELVLQRLRTKSTIQDLLLNA 197 A TI+E + + K + + L+++ Sbjct: 1007 ATGTIEEKMNELQEKKRHLVEELIDS 1032 >gi|182626118|ref|ZP_02953879.1| helicase, SNF2/RAD54 family [Clostridium perfringens D str. JGS1721] gi|177908639|gb|EDT71160.1| helicase, SNF2/RAD54 family [Clostridium perfringens D str. JGS1721] Length = 1084 Score = 136 bits (343), Expect = 2e-30, Method: Composition-based stats. Identities = 46/197 (23%), Positives = 72/197 (36%), Gaps = 25/197 (12%) Query: 14 DLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKE--VHDEKIKALEVIIEKA--NAA 69 D + N S K QLA D + KI+AL I+ + Sbjct: 871 DAEEFNKSKIEILSYITKLRQLA-----LDPSVTINDYMGESAKIEALVEILNQGIEEGH 925 Query: 70 PIIVAYHFNSDLARLQKAFPQGRTL----------DKDPCTIQEWNEGKIPLLFAHPASC 119 I+V F S L + + + K + E+NEG+ + + Sbjct: 926 KILVFSQFTSVLKNISSRLKEEKISFSYLDGSVSSKKRINMVNEFNEGENSVFLISLKAG 985 Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 G GLNL +I++ F WW+ Q +R + G K V V LIA+ TI+E Sbjct: 986 GIGLNLT-SADIVIHFDPWWNPAVENQATDR-----AHRMGQKNVVEVIKLIAKGTIEEK 1039 Query: 180 VLQRLRTKSTIQDLLLN 196 V+ K + ++ Sbjct: 1040 VVALQEEKKELISKIIE 1056 >gi|30019888|ref|NP_831519.1| SWF/SNF family helicase [Bacillus cereus ATCC 14579] gi|229127175|ref|ZP_04256172.1| Helicase, SWF/SNF [Bacillus cereus BDRD-Cer4] gi|29895433|gb|AAP08720.1| SWF/SNF family helicase [Bacillus cereus ATCC 14579] gi|228656291|gb|EEL12132.1| Helicase, SWF/SNF [Bacillus cereus BDRD-Cer4] Length = 1064 Score = 136 bits (343), Expect = 2e-30, Method: Composition-based stats. Identities = 43/206 (20%), Positives = 80/206 (38%), Gaps = 25/206 (12%) Query: 6 KFQRELYCDLQGENI--EAFNSASKTVKCLQLANG-AVYYDEEKHWKEVHDEKIKALEVI 62 K + E L + + + + Q+ A++ D+ K K + L I Sbjct: 849 KLREETLKHLDKDTLRKNKIRILAGLTRLRQICCHPALFVDDYK----GSSAKFEQLLEI 904 Query: 63 IEK--ANAAPIIVAYHFNSDL---------ARLQKAFPQGRTLDKDPCTI-QEWNEGKIP 110 +E+ + I++ F L + + G T +D + +NEG+ Sbjct: 905 LEECRSTGKRILIFSQFTKMLSIIGRELNRQAIPYFYLDGSTPAQDRVELCDRFNEGEGD 964 Query: 111 LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYL 170 L + G GLNL G + ++ + LWW+ QQ +R + G K V V L Sbjct: 965 LFLISLKAGGTGLNLT-GADTVILYDLWWNPAVEQQAADR-----AYRMGQKNTVQVIKL 1018 Query: 171 IAQNTIDELVLQRLRTKSTIQDLLLN 196 +A TI+E + + +K + ++ Sbjct: 1019 VAHGTIEEKMHELQESKKNLIAEVIE 1044 >gi|320353039|ref|YP_004194378.1| SNF2-like protein [Desulfobulbus propionicus DSM 2032] gi|320121541|gb|ADW17087.1| SNF2-related protein [Desulfobulbus propionicus DSM 2032] Length = 1447 Score = 136 bits (343), Expect = 2e-30, Method: Composition-based stats. Identities = 40/212 (18%), Positives = 78/212 (36%), Gaps = 29/212 (13%) Query: 4 YHKFQRELYCDLQGENIEAFNS------ASKTVKCLQLANGAVYYDEEKHWKEVHDEKIK 57 Y +++ + E N ++ + Q + + K+ Sbjct: 1228 YEALRQQALERIDAEQ--GTNGQKPMRILAEITRLRQACCHPRLLQADST---IAGAKLA 1282 Query: 58 ALEVIIEKA--NAAPIIVAYHFNSDLARLQK---------AFPQGRTLDKDPC-TIQEWN 105 ++ + N +V F LA +++ + G T K+ ++ + Sbjct: 1283 LFGEVVAELLDNGHKALVFSQFVGHLALIREYLDARAIPYRYLDGSTPPKERQREVEAFQ 1342 Query: 106 EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 G+ L + G GLNL + ++ WW+ Q +R + G +R V Sbjct: 1343 AGQGDLFLISLKAGGLGLNLT-AADYVIHMDPWWNPAVEDQASDR-----AHRIGQQRPV 1396 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 VY L+AQ TI+E +++ K + D LL+A Sbjct: 1397 TVYRLVAQQTIEEKIVRLHAEKRDLADSLLDA 1428 >gi|225619641|ref|YP_002720898.1| superfamily II D/R helicase [Brachyspira hyodysenteriae WA1] gi|225214460|gb|ACN83194.1| HepA, Superfamily II D/R helicase, SNF2 family [Brachyspira hyodysenteriae WA1] Length = 1033 Score = 136 bits (343), Expect = 2e-30, Method: Composition-based stats. Identities = 38/180 (21%), Positives = 71/180 (39%), Gaps = 18/180 (10%) Query: 27 SKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARL 84 S + Q+ ++ + K +I++A ++V F L + Sbjct: 841 SALTRLRQVCCHPRLMHDDLRGESHTSGKFHMFIEMIKEAISGGHSVLVFSSFTRMLNLM 900 Query: 85 QKAFPQ---------GRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFF 135 + AF + G T D+ + +N G+ P+ + G GL L + ++ + Sbjct: 901 RSAFKKLGIDYFYLDGATKDRM-DLVHRFNAGEAPIFLLSLKAAGTGLTLTQ-ADTVMHY 958 Query: 136 SLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 LWW+ Q +R + G KR V Y LI + TI+E +L+ K + D ++ Sbjct: 959 DLWWNPAVEDQATDR-----AYRIGQKRVVTNYKLITRGTIEEKILELQNKKRLLIDTVV 1013 >gi|229132678|ref|ZP_04261525.1| Helicase, SWF/SNF [Bacillus cereus BDRD-ST196] gi|228650805|gb|EEL06793.1| Helicase, SWF/SNF [Bacillus cereus BDRD-ST196] Length = 1068 Score = 136 bits (343), Expect = 2e-30, Method: Composition-based stats. Identities = 43/206 (20%), Positives = 80/206 (38%), Gaps = 25/206 (12%) Query: 6 KFQRELYCDLQGENI--EAFNSASKTVKCLQLANG-AVYYDEEKHWKEVHDEKIKALEVI 62 K + E L + + + + Q+ A++ D+ K K L I Sbjct: 853 KLREETLKHLDKDTLRKNKIRVLAGLTRLRQICCHPALFVDDYK----GSSAKFDQLLEI 908 Query: 63 IEK--ANAAPIIVAYHFNSDLARL-----QKAFPQGRTLDKDPCTIQ-----EWNEGKIP 110 +E+ + I++ F L+ + ++A P P + +NEG+ Sbjct: 909 LEECRSTGKRILIFSQFTKMLSIIGRELNRQAVPYFYLDGSTPAQERVELCNRFNEGEGD 968 Query: 111 LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYL 170 L + G GLNL G + ++ + LWW+ QQ +R + G K V V L Sbjct: 969 LFLISLKAGGTGLNLT-GADTVILYDLWWNPAVEQQAADR-----AYRMGQKNTVQVIKL 1022 Query: 171 IAQNTIDELVLQRLRTKSTIQDLLLN 196 +A TI+E + + +K + ++ Sbjct: 1023 VAHGTIEEKMHELQESKKNLIAEIIE 1048 >gi|1769947|emb|CAA67095.1| SNF [Bacillus cereus ATCC 10987] Length = 1064 Score = 136 bits (343), Expect = 2e-30, Method: Composition-based stats. Identities = 44/206 (21%), Positives = 83/206 (40%), Gaps = 25/206 (12%) Query: 6 KFQRELYCDLQGENI--EAFNSASKTVKCLQLANG-AVYYDEEKHWKEVHDEKIKALEVI 62 K + E L + + + + Q+ N A++ D+ K K++ L I Sbjct: 849 KLREETLKHLDKDTLRKNKIRILAGLTRLRQICNHPALFVDDYK----GSSAKLEQLLDI 904 Query: 63 IEK--ANAAPIIVAYHFNSDLARL-----QKAFPQGRTLDKDPCTIQ-----EWNEGKIP 110 +E+ + I++ F L+ + ++A P P + +NEG+ Sbjct: 905 LEECRSTGKRILIFSQFTKMLSIIGRELNRQAIPYFYLDGNTPSQERVELCNRFNEGEGD 964 Query: 111 LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYL 170 L + G GLNL G + ++ + LWW+ QQ +R + G K V V L Sbjct: 965 LFLISLKAGGTGLNLT-GADTVILYDLWWNPAVEQQAADR-----AYRMGQKNTVQVIKL 1018 Query: 171 IAQNTIDELVLQRLRTKSTIQDLLLN 196 +A TI+E + + +K + ++ Sbjct: 1019 VAHGTIEEKMHELQESKKHLIAEVIE 1044 >gi|163939654|ref|YP_001644538.1| non-specific serine/threonine protein kinase [Bacillus weihenstephanensis KBAB4] gi|163861851|gb|ABY42910.1| Non-specific serine/threonine protein kinase [Bacillus weihenstephanensis KBAB4] Length = 1068 Score = 136 bits (343), Expect = 2e-30, Method: Composition-based stats. Identities = 43/206 (20%), Positives = 80/206 (38%), Gaps = 25/206 (12%) Query: 6 KFQRELYCDLQGENI--EAFNSASKTVKCLQLANG-AVYYDEEKHWKEVHDEKIKALEVI 62 K + E L + + + + Q+ A++ D+ K K L I Sbjct: 853 KLREETLKHLDKDTLRKNKIRVLAGLTRLRQICCHPALFVDDYK----GSSAKFDQLLEI 908 Query: 63 IEK--ANAAPIIVAYHFNSDLARL-----QKAFPQGRTLDKDPCTIQ-----EWNEGKIP 110 +E+ + I++ F L+ + ++A P P + +NEG+ Sbjct: 909 LEECRSTGKRILIFSQFTKMLSIIGRELNRQAVPYFYLDGSTPAQERVELCNRFNEGEGD 968 Query: 111 LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYL 170 L + G GLNL G + ++ + LWW+ QQ +R + G K V V L Sbjct: 969 LFLISLKAGGTGLNLT-GADTVILYDLWWNPAVEQQAADR-----AYRMGQKNTVQVIKL 1022 Query: 171 IAQNTIDELVLQRLRTKSTIQDLLLN 196 +A TI+E + + +K + ++ Sbjct: 1023 VAHGTIEEKMHELQESKKNLIAEIIE 1048 >gi|229059502|ref|ZP_04196884.1| Helicase, SWF/SNF [Bacillus cereus AH603] gi|228719785|gb|EEL71379.1| Helicase, SWF/SNF [Bacillus cereus AH603] Length = 1068 Score = 136 bits (343), Expect = 2e-30, Method: Composition-based stats. Identities = 43/206 (20%), Positives = 80/206 (38%), Gaps = 25/206 (12%) Query: 6 KFQRELYCDLQGENI--EAFNSASKTVKCLQLANG-AVYYDEEKHWKEVHDEKIKALEVI 62 K + E L + + + + Q+ A++ D+ K K L I Sbjct: 853 KLREETLKHLDKDTLRKNKIRVLAGLTRLRQICCHPALFVDDYK----GSSAKFDQLLEI 908 Query: 63 IEK--ANAAPIIVAYHFNSDLARL-----QKAFPQGRTLDKDPCTIQ-----EWNEGKIP 110 +E+ + I++ F L+ + ++A P P + +NEG+ Sbjct: 909 LEECRSTGKRILIFSQFTKMLSIIGRELNRQAVPYFYLDGSTPAQERVELCNRFNEGEGD 968 Query: 111 LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYL 170 L + G GLNL G + ++ + LWW+ QQ +R + G K V V L Sbjct: 969 LFLISLKAGGTGLNLT-GADTVILYDLWWNPAVEQQAADR-----AYRMGQKNTVQVIKL 1022 Query: 171 IAQNTIDELVLQRLRTKSTIQDLLLN 196 +A TI+E + + +K + ++ Sbjct: 1023 VAHGTIEEKMHELQESKKNLIAEIIE 1048 >gi|227875351|ref|ZP_03993493.1| SNF2 family superfamily II DNA/RNA helicase [Mobiluncus mulieris ATCC 35243] gi|227844256|gb|EEJ54423.1| SNF2 family superfamily II DNA/RNA helicase [Mobiluncus mulieris ATCC 35243] Length = 966 Score = 136 bits (343), Expect = 2e-30, Method: Composition-based stats. Identities = 48/205 (23%), Positives = 78/205 (38%), Gaps = 19/205 (9%) Query: 3 QYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEK-HWKEVHDEKIKALEV 61 Y K+ + +G + N + + QL+ A + D + AL Sbjct: 751 LYQKYLVAARLEAEGLRAKRLNVLTALTRLRQLSLSARLINPAVPEDGAKIDYLVDALPD 810 Query: 62 IIEKANAAPIIVAYHFNSDLARLQ---------KAFPQGRTLDKDPCTIQEWNEGKIPLL 112 + A I+V F S LA L+ A+ G T ++ + + G + Sbjct: 811 L--AAQDHNILVFSQFTSFLALLRARLEDQGITYAYLDGSTRNRRDQ-VDCFQRGSARVF 867 Query: 113 FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIA 172 S G GLNL + + WW+ + Q I+R + G R V VY L+A Sbjct: 868 LISLKSGGFGLNLT-AADYVFLCDPWWNPQVESQAIDR-----AHRIGQTRPVNVYRLVA 921 Query: 173 QNTIDELVLQRLRTKSTIQDLLLNA 197 +NTI++ VL K + D +L Sbjct: 922 KNTIEQRVLAMQAQKRELFDQVLRG 946 >gi|89902690|ref|YP_525161.1| SNF2-like protein [Rhodoferax ferrireducens T118] gi|89347427|gb|ABD71630.1| SNF2-related [Rhodoferax ferrireducens T118] Length = 1178 Score = 136 bits (343), Expect = 2e-30, Method: Composition-based stats. Identities = 37/195 (18%), Positives = 74/195 (37%), Gaps = 16/195 (8%) Query: 13 CDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEK--ANAAP 70 D +G +K Q+ K + K++ L ++ + A Sbjct: 967 LDTKGMAKSQITILDALLKLRQVCCDPHLVTLAAAKKVSNSAKLERLMEMLPEMLAEGRR 1026 Query: 71 IIVAYHFNSDLARLQKAFPQGRTL--------DKDPCTIQEWNEGKIPLLFAHPASCGHG 122 I++ F S L ++ + K I+++ G +PL + G G Sbjct: 1027 ILLFSQFTSMLKLIEAELQKRNIPWIKLTGQSQKRDALIEQFTSGAVPLFLISLKAGGVG 1086 Query: 123 LNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQ 182 LNL + ++ + WW+ Q +R + G ++V+V L+AQ TI+E +L Sbjct: 1087 LNLPQ-ADTVIHYDPWWNPAVENQATDR-----AHRIGQTQSVWVVKLVAQGTIEERILG 1140 Query: 183 RLRTKSTIQDLLLNA 197 K+ + + + + Sbjct: 1141 LQERKAALAESMYSG 1155 >gi|42780946|ref|NP_978193.1| helicase, putative [Bacillus cereus ATCC 10987] gi|42736867|gb|AAS40801.1| helicase, putative [Bacillus cereus ATCC 10987] Length = 1064 Score = 136 bits (343), Expect = 2e-30, Method: Composition-based stats. Identities = 44/206 (21%), Positives = 83/206 (40%), Gaps = 25/206 (12%) Query: 6 KFQRELYCDLQGENI--EAFNSASKTVKCLQLANG-AVYYDEEKHWKEVHDEKIKALEVI 62 K + E L + + + + Q+ N A++ D+ K K++ L I Sbjct: 849 KLREETLKHLDKDTLRKNKIRILAGLTRLRQICNHPALFVDDYK----GSSAKLEQLLDI 904 Query: 63 IEK--ANAAPIIVAYHFNSDLARL-----QKAFPQGRTLDKDPCTIQ-----EWNEGKIP 110 +E+ + I++ F L+ + ++A P P + +NEG+ Sbjct: 905 LEECRSTGKRILIFSQFTKMLSIIGRELNRQAIPYFYLDGNTPSQERVELCNRFNEGEGD 964 Query: 111 LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYL 170 L + G GLNL G + ++ + LWW+ QQ +R + G K V V L Sbjct: 965 LFLISLKAGGTGLNLT-GADTVILYDLWWNPAVEQQAADR-----AYRMGQKNTVQVIKL 1018 Query: 171 IAQNTIDELVLQRLRTKSTIQDLLLN 196 +A TI+E + + +K + ++ Sbjct: 1019 VAHGTIEEKMHELQESKKHLIAEVIE 1044 >gi|269976365|ref|ZP_06183357.1| helicase/SNF2 family domain-containing protein [Mobiluncus mulieris 28-1] gi|269935436|gb|EEZ91978.1| helicase/SNF2 family domain-containing protein [Mobiluncus mulieris 28-1] Length = 970 Score = 136 bits (343), Expect = 2e-30, Method: Composition-based stats. Identities = 48/205 (23%), Positives = 78/205 (38%), Gaps = 19/205 (9%) Query: 3 QYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEK-HWKEVHDEKIKALEV 61 Y K+ + +G + N + + QL+ A + D + AL Sbjct: 755 LYQKYLVAARLEAEGLRAKRLNVLTALTRLRQLSLSARLINPAVPEDGAKIDYLVDALPD 814 Query: 62 IIEKANAAPIIVAYHFNSDLARLQ---------KAFPQGRTLDKDPCTIQEWNEGKIPLL 112 + A I+V F S LA L+ A+ G T ++ + + G + Sbjct: 815 L--AAQDHNILVFSQFTSFLALLRARLEDQGITYAYLDGSTRNRRDQ-VDCFQRGSARVF 871 Query: 113 FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIA 172 S G GLNL + + WW+ + Q I+R + G R V VY L+A Sbjct: 872 LISLKSGGFGLNLT-AADYVFLCDPWWNPQVESQAIDR-----AHRIGQTRPVNVYRLVA 925 Query: 173 QNTIDELVLQRLRTKSTIQDLLLNA 197 +NTI++ VL K + D +L Sbjct: 926 KNTIEQRVLAMQAQKRELFDQVLRG 950 >gi|251773065|gb|EES53621.1| DNA/RNA helicase, SNF2 family [Leptospirillum ferrodiazotrophum] Length = 1381 Score = 136 bits (343), Expect = 2e-30, Method: Composition-based stats. Identities = 34/211 (16%), Positives = 75/211 (35%), Gaps = 26/211 (12%) Query: 4 YHKFQRELYCDLQ-----GENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKA 58 Y +R+ L+ + + ++ K + + + K+ A Sbjct: 1162 YEALRRKALETLEKLSGREKGSSRIHILAEITKLRRALCHPALVEP---LTLLPGAKLDA 1218 Query: 59 LEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTL----------DKDPCTIQEWNE 106 +++ + +N +V F L R+ K+ + + + + Sbjct: 1219 FHLLVNELLSNRHKALVFSQFTGFLDRVAKSLDAKKIPYQYLDGSTPPKEREKRVAAFQA 1278 Query: 107 GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVF 166 G+ L + G GLNL + ++ WW+ Q +R + G +R V Sbjct: 1279 GQGDLFLISLRAGGTGLNLT-AADYVIHLDPWWNPAVEDQASDR-----AHRIGQQRPVT 1332 Query: 167 VYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 +Y LI + +++E +L+ + K + LL Sbjct: 1333 IYRLIVRESLEEKILELHKKKRDLATDLLEG 1363 >gi|315038431|ref|YP_004031999.1| Non-specific serine/threonine protein kinase [Lactobacillus amylovorus GRL 1112] gi|312276564|gb|ADQ59204.1| Non-specific serine/threonine protein kinase [Lactobacillus amylovorus GRL 1112] Length = 1180 Score = 136 bits (343), Expect = 2e-30, Method: Composition-based stats. Identities = 40/212 (18%), Positives = 87/212 (41%), Gaps = 27/212 (12%) Query: 3 QYHKFQRELYCDLQGENIE-----AFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIK 57 YH ++ L G++ + F ++ K ++ + +K+K Sbjct: 959 LYHLQMNKIIAQLNGQDDDDFKKSRFQILAQITKLREICCDPHLLYDN---YHGKSDKLK 1015 Query: 58 ALEVIIEKA--NAAPIIVAYHFNSDLARLQKAFPQGRT----------LDKDPCTIQEWN 105 +I+ N I++ F S L LQ+ + + +K IQ +N Sbjct: 1016 TTIDLIKSNLENGHKILLFSQFTSMLDILQEKLAKLKVPTFMLTGSTPKEKRQEDIQHFN 1075 Query: 106 EGKIP-LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA 164 K P + + G G+NL ++++ + WW++ Q +R + G K + Sbjct: 1076 SLKQPGVFLISLKAGGTGINLT-SADVVIHYDPWWNIAAENQATDR-----AHRIGQKNS 1129 Query: 165 VFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 V +Y ++ Q+T++E +++ + K+ + +LN Sbjct: 1130 VKIYKMVTQDTVEERIIKLQQKKAELAQAILN 1161 >gi|323357442|ref|YP_004223838.1| superfamily II DNA/RNA helicase, SNF2 family [Microbacterium testaceum StLB037] gi|323273813|dbj|BAJ73958.1| superfamily II DNA/RNA helicase, SNF2 family [Microbacterium testaceum StLB037] Length = 1063 Score = 136 bits (343), Expect = 2e-30, Method: Composition-based stats. Identities = 45/211 (21%), Positives = 82/211 (38%), Gaps = 26/211 (12%) Query: 2 KQYHKF---QRELYCDLQGENIEAFNSASKTVK-CLQLANGAVYYDEEKHWKEVHDEKIK 57 K Y + +R+ L + + +++ QLA DE E K+ Sbjct: 840 KLYDRRFHRERQRLLGLLDDAEGNSFAIFRSLTMLRQLALDPALVDEG----EAPSAKLD 895 Query: 58 ALEVII--EKANAAPIIVAYHFNSDLARLQKA---------FPQGRTLDKDPCTIQEWNE 106 ALE ++ A ++V F L ++ + G T ++ I + + Sbjct: 896 ALEELLVEAAAEGHRVLVLSQFTRFLRAARQRCTDAGLASGYLDGTTTNRQAE-IDRFRD 954 Query: 107 GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVF 166 G P F + G GLNL + +V WW+ Q I+R + G R V Sbjct: 955 GDDPAFFVSLKAGGVGLNLVE-ADYVVLLDPWWNPAVEDQAIDR-----AHRIGQTRPVI 1008 Query: 167 VYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 VY L++ +T+++ V+ K+ + +L+ Sbjct: 1009 VYRLVSSDTVEQKVVALREAKAELFSRVLDG 1039 >gi|110004998|emb|CAK99329.1| hypothetical dna/rna helicase protein [Spiroplasma citri] Length = 1098 Score = 136 bits (342), Expect = 2e-30, Method: Composition-based stats. Identities = 41/183 (22%), Positives = 76/183 (41%), Gaps = 22/183 (12%) Query: 27 SKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIE--KANAAPIIVAYHFNSDLARL 84 + K Q+ D++ + K+ AL I + + I++ F + L R+ Sbjct: 903 ATLTKLRQICCDPSILDKK---YQNESAKLDALRDIFDDLAGSGHKILIFSQFTTVLKRI 959 Query: 85 ---------QKAFPQGRTLDKDPCTI-QEWNEGKI-PLLFAHPASCGHGLNLQYGGNILV 133 Q + G+T + + +++NE KI + + G GLNL ++++ Sbjct: 960 KAIVEEIGLQYFYLDGKTRSESRVLMTEKFNEDKIINVFLISLKAGGVGLNLT-AADVVI 1018 Query: 134 FFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDL 193 F WW+ Q +R + G + V V LIA+ TI+E +L K + + Sbjct: 1019 HFDPWWNPSVENQATDR-----AHRFGQQNTVQVIKLIAKGTIEEKILTIQNNKQEVINA 1073 Query: 194 LLN 196 +LN Sbjct: 1074 VLN 1076 >gi|229166704|ref|ZP_04294454.1| Helicase, SWF/SNF [Bacillus cereus AH621] gi|228616701|gb|EEK73776.1| Helicase, SWF/SNF [Bacillus cereus AH621] Length = 1064 Score = 136 bits (342), Expect = 2e-30, Method: Composition-based stats. Identities = 43/206 (20%), Positives = 80/206 (38%), Gaps = 25/206 (12%) Query: 6 KFQRELYCDLQGENI--EAFNSASKTVKCLQLANG-AVYYDEEKHWKEVHDEKIKALEVI 62 K + E L + + + + Q+ A++ D+ K K L I Sbjct: 849 KLREETLKHLDKDTLRKNKIRVLAGLTRLRQICCHPALFVDDYK----GSSAKFDQLLEI 904 Query: 63 IEK--ANAAPIIVAYHFNSDLARL-----QKAFPQGRTLDKDPCTIQ-----EWNEGKIP 110 +E+ + I++ F L+ + ++A P P + +NEG+ Sbjct: 905 LEECRSTGKRILIFSQFTKMLSIIGRELNRQAVPYFYLDGSTPAQERVELCNRFNEGEGD 964 Query: 111 LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYL 170 L + G GLNL G + ++ + LWW+ QQ +R + G K V V L Sbjct: 965 LFLISLKAGGTGLNLT-GADTVILYDLWWNPAVEQQAADR-----AYRMGQKNTVQVIKL 1018 Query: 171 IAQNTIDELVLQRLRTKSTIQDLLLN 196 +A TI+E + + +K + ++ Sbjct: 1019 VAHGTIEEKMHELQESKKNLIAEIIE 1044 >gi|186687055|ref|YP_001870198.1| SNF2-related protein [Nostoc punctiforme PCC 73102] gi|186469358|gb|ACC85157.1| SNF2-related protein [Nostoc punctiforme PCC 73102] Length = 1403 Score = 136 bits (342), Expect = 2e-30, Method: Composition-based stats. Identities = 35/210 (16%), Positives = 74/210 (35%), Gaps = 25/210 (11%) Query: 4 YHKFQRELYCDLQGENIEA----FNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKAL 59 Y +R+ L + +A ++ +K + + + K++ Sbjct: 1184 YEALRRQAISKLTESDADAGKKHLQVLAEIMKLRRACCNPSLVMPD---TVLPSSKLQLF 1240 Query: 60 EVIIEKA--NAAPIIVAYHFNSDLARLQKAFPQGRT----------LDKDPCTIQEWNEG 107 ++ + N +V F L ++ Q + + + + G Sbjct: 1241 GEVLGELLENRHKALVFSQFVDHLHIIRDYLEQQGINYQYLDGSTSVAERKKRVDAFQAG 1300 Query: 108 KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFV 167 + + G GLNL + ++ WW+ Q +R + G +R V + Sbjct: 1301 SGDVFLISLKAGGTGLNLT-AADYVIHTDPWWNPAVEDQASDR-----AHRIGQQRPVTI 1354 Query: 168 YYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 Y L+A++TI+E ++Q K + D LL Sbjct: 1355 YRLVAKDTIEEKIVQLHHQKRDLADSLLEG 1384 >gi|229011148|ref|ZP_04168341.1| Helicase, SWF/SNF [Bacillus mycoides DSM 2048] gi|228750031|gb|EEL99863.1| Helicase, SWF/SNF [Bacillus mycoides DSM 2048] Length = 1064 Score = 136 bits (342), Expect = 2e-30, Method: Composition-based stats. Identities = 43/206 (20%), Positives = 80/206 (38%), Gaps = 25/206 (12%) Query: 6 KFQRELYCDLQGENI--EAFNSASKTVKCLQLANG-AVYYDEEKHWKEVHDEKIKALEVI 62 K + E L + + + + Q+ A++ D+ K K L I Sbjct: 849 KLREETLKHLDKDTLRKNKIRVLAGLTRLRQICCHPALFVDDYK----GSSAKFDQLLEI 904 Query: 63 IEK--ANAAPIIVAYHFNSDLARL-----QKAFPQGRTLDKDPCTIQ-----EWNEGKIP 110 +E+ + I++ F L+ + ++A P P + +NEG+ Sbjct: 905 LEECRSTGKRILIFSQFTKMLSIIGRELNRQAVPYFYLDGSTPAQERVELCNRFNEGEGD 964 Query: 111 LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYL 170 L + G GLNL G + ++ + LWW+ QQ +R + G K V V L Sbjct: 965 LFLISLKAGGTGLNLT-GADTVILYDLWWNPAVEQQAADR-----AYRMGQKNTVQVIKL 1018 Query: 171 IAQNTIDELVLQRLRTKSTIQDLLLN 196 +A TI+E + + +K + ++ Sbjct: 1019 VAHGTIEEKMHELQESKKNLIAEIIE 1044 >gi|226307557|ref|YP_002767517.1| helicase [Rhodococcus erythropolis PR4] gi|226186674|dbj|BAH34778.1| putative helicase [Rhodococcus erythropolis PR4] Length = 1060 Score = 136 bits (342), Expect = 2e-30, Method: Composition-based stats. Identities = 44/204 (21%), Positives = 79/204 (38%), Gaps = 21/204 (10%) Query: 6 KFQRELYCDLQGE-NIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIE 64 + +R+ L + + F QL+ DEE V K+ AL ++ Sbjct: 848 QRERQKILGLLDDVDKNRFTILQSQTVLRQLSLDVSLVDEESGP--VPSAKVDALVEQLD 905 Query: 65 K--ANAAPIIVAYHFNSDL---------ARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLF 113 A ++ F L ++ ++ G T ++ ++E+ G P+ Sbjct: 906 DVIAGGHRALIFSQFTGFLGSVRKRLEAEKIPYSYLDGSTRNRGE-VLEEFKSGVAPVFL 964 Query: 114 AHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQ 173 + G GLNL + WW+ Q ++R + G R V VY LIA+ Sbjct: 965 ISLKAGGFGLNLTEADYCFIL-DPWWNPAAEAQAVDR-----THRIGQTRNVMVYRLIAK 1018 Query: 174 NTIDELVLQRLRTKSTIQDLLLNA 197 +TI+E V+ KS + +++A Sbjct: 1019 DTIEEKVMALKAKKSALFSNVMDA 1042 >gi|320103193|ref|YP_004178784.1| SNF2-like protein [Isosphaera pallida ATCC 43644] gi|319750475|gb|ADV62235.1| SNF2-related protein [Isosphaera pallida ATCC 43644] Length = 1912 Score = 136 bits (342), Expect = 2e-30, Method: Composition-based stats. Identities = 36/211 (17%), Positives = 76/211 (36%), Gaps = 25/211 (11%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASK--TVKCLQLANGAVYYDEEKHWKEVHDEKIKAL 59 K Y + + L G+ + ++ Q + ++ + K+ L Sbjct: 1694 KDYEELRTHYRRALLGKTKGGSHLEVLEALLRLRQASCHPGLIHPDRVDQ--PSAKLDVL 1751 Query: 60 ----EVIIEKANAAPIIVAYHFNS---------DLARLQKAFPQGRTLDKDPCTIQEWNE 106 +IE+ ++ F D + + G+T ++ + N+ Sbjct: 1752 LPHLAEVIEE--GHKALIFSQFTRFLNIVKDRLDKEGIVYEYLDGKTHNRAERVERFQND 1809 Query: 107 GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVF 166 +P+ + G GLNL + WW+ Q I+R + G VF Sbjct: 1810 PNVPVFLISLKAGGLGLNLT-AAEYVYLLDPWWNPAVEAQAIDR-----SHRIGQTSHVF 1863 Query: 167 VYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 Y LI ++T+++ +++ +TK + D +L Sbjct: 1864 AYRLICRDTVEQKIIELQKTKRALADAILGG 1894 >gi|306818666|ref|ZP_07452388.1| SNF2 family protein [Mobiluncus mulieris ATCC 35239] gi|304648352|gb|EFM45655.1| SNF2 family protein [Mobiluncus mulieris ATCC 35239] Length = 970 Score = 136 bits (342), Expect = 2e-30, Method: Composition-based stats. Identities = 48/205 (23%), Positives = 78/205 (38%), Gaps = 19/205 (9%) Query: 3 QYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEK-HWKEVHDEKIKALEV 61 Y K+ + +G + N + + QL+ A + D + AL Sbjct: 755 LYQKYLVAARLEAEGLRAKRLNVLTALTRLRQLSLSARLINPAVPEDGAKIDYLVDALPD 814 Query: 62 IIEKANAAPIIVAYHFNSDLARLQ---------KAFPQGRTLDKDPCTIQEWNEGKIPLL 112 + A I+V F S LA L+ A+ G T ++ + + G + Sbjct: 815 L--AAQDHNILVFSQFTSFLALLRARLEDQGITYAYLDGSTRNRRDQ-VDCFQRGSARVF 871 Query: 113 FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIA 172 S G GLNL + + WW+ + Q I+R + G R V VY L+A Sbjct: 872 LISLKSGGFGLNLT-AADYVFLCDPWWNPQVESQAIDR-----AHRIGQTRPVNVYRLVA 925 Query: 173 QNTIDELVLQRLRTKSTIQDLLLNA 197 +NTI++ VL K + D +L Sbjct: 926 KNTIEQRVLAMQAQKRELFDQVLRG 950 >gi|315223118|ref|ZP_07864986.1| protein, SNF2 family [Streptococcus anginosus F0211] gi|315187807|gb|EFU21554.1| protein, SNF2 family [Streptococcus anginosus F0211] Length = 1036 Score = 136 bits (342), Expect = 2e-30, Method: Composition-based stats. Identities = 40/215 (18%), Positives = 82/215 (38%), Gaps = 24/215 (11%) Query: 1 MKQYHKFQRELYCDLQGENIE--AFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKA 58 + Q + RE E + S ++ Q+ + + E+ H K+++ Sbjct: 811 LAQLKQM-RERVLTSTEEELNRSKMEILSGLMRLRQICDTPALFMEDYH---GESGKLES 866 Query: 59 LEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRT----------LDKDPCTIQEWNE 106 L ++E+ + +++ F L ++K + + + +N Sbjct: 867 LMELLEQIQTGSHRVLIFSQFRGMLDIIEKELKKMKIETFKITGSTPAKERQEMTNAFNN 926 Query: 107 GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVF 166 G+ + G GLNL G + ++ LWW+ Q I R + G +R V Sbjct: 927 GEGDAFLISLKAGGVGLNLT-GADTVILVDLWWNPAVESQAIGR-----AHRMGQERNVE 980 Query: 167 VYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 VY LI + TI+E + + +K + +L+ + Sbjct: 981 VYRLITRGTIEEKIQELQESKRHLVSTILDGTESR 1015 >gi|310823284|ref|YP_003955642.1| snf2/helicase domain-containing protein [Stigmatella aurantiaca DW4/3-1] gi|309396356|gb|ADO73815.1| SNF2/helicase domain protein [Stigmatella aurantiaca DW4/3-1] Length = 1081 Score = 136 bits (342), Expect = 2e-30, Method: Composition-based stats. Identities = 37/185 (20%), Positives = 70/185 (37%), Gaps = 19/185 (10%) Query: 23 FNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSD 80 + + ++ Q+ + K++ +++ A +V F Sbjct: 882 VSILAALMRLRQVCCDPRLLKLPPNTLLPSSAKLERFGQLVDDLVAEGHRALVFSQFTEM 941 Query: 81 LARLQ---------KAFPQGRTLDKDPCTIQEWNEGK-IPLLFAHPASCGHGLNLQYGGN 130 L L+ + GRT D+ + ++N + PL F + G GLNL + Sbjct: 942 LELLKTEADKRGLNYLYLDGRTKDRMAK-VDDFNRPEGPPLFFISLKAGGTGLNLT-AAD 999 Query: 131 ILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 ++ + WW+ Q +R + G RAV Y LI + T++E +L R K + Sbjct: 1000 YVIHYDPWWNPAVEDQATDR-----THRIGQTRAVISYKLITRGTVEEKILSLQRRKKEL 1054 Query: 191 QDLLL 195 +L Sbjct: 1055 AAGVL 1059 >gi|124004680|ref|ZP_01689524.1| Snf2 family helicase [Microscilla marina ATCC 23134] gi|123989803|gb|EAY29332.1| Snf2 family helicase [Microscilla marina ATCC 23134] Length = 960 Score = 136 bits (342), Expect = 2e-30, Method: Composition-based stats. Identities = 46/210 (21%), Positives = 75/210 (35%), Gaps = 24/210 (11%) Query: 2 KQYHKFQ----RELYCDLQGENIEAFNSASK--TVKCLQLANGAVYYDEE-KHWKEVHDE 54 K Y K + E+ ++ + K QLAN D+ + D+ Sbjct: 739 KAYEKVKSQYRNEILKQIESSGMAKTQFLLLQGLTKLRQLANHPRMIDQGYEESSGKMDD 798 Query: 55 KIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQ---------GRTLDKDPCTIQEWN 105 + LE II N ++V F L L+ AF + G T ++ Q Sbjct: 799 ILYKLESII--GNGHKVLVFSQFVKHLQLLKNAFEERQWRFAYLDGSTKNRQQQVEQFQT 856 Query: 106 EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 +I L + G GLNL + WW+ Q ++R + G + V Sbjct: 857 NDEIQLFLISLKAGGVGLNLT-AAEYVFLLDPWWNPAIEAQAVDR-----AHRIGQENTV 910 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 F Y I + T++E +L K + L+ Sbjct: 911 FTYKFITKGTVEEKILALQTNKRRLAQDLI 940 >gi|307700797|ref|ZP_07637822.1| SNF2 family N-terminal domain protein [Mobiluncus mulieris FB024-16] gi|307613792|gb|EFN93036.1| SNF2 family N-terminal domain protein [Mobiluncus mulieris FB024-16] Length = 970 Score = 136 bits (342), Expect = 2e-30, Method: Composition-based stats. Identities = 48/205 (23%), Positives = 78/205 (38%), Gaps = 19/205 (9%) Query: 3 QYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEK-HWKEVHDEKIKALEV 61 Y K+ + +G + N + + QL+ A + D + AL Sbjct: 755 LYQKYLVAARLEAEGLRAKRLNVLTALTRLRQLSLSARLINPAVPEDGAKIDYLVDALPD 814 Query: 62 IIEKANAAPIIVAYHFNSDLARLQ---------KAFPQGRTLDKDPCTIQEWNEGKIPLL 112 + A I+V F S LA L+ A+ G T ++ + + G + Sbjct: 815 L--AAQDHNILVFSQFTSFLALLRARLEDQGITYAYLDGSTRNRRDQ-VDCFQRGSARVF 871 Query: 113 FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIA 172 S G GLNL + + WW+ + Q I+R + G R V VY L+A Sbjct: 872 LISLKSGGFGLNLT-AADYVFLCDPWWNPQVESQAIDR-----AHRIGQTRPVNVYRLVA 925 Query: 173 QNTIDELVLQRLRTKSTIQDLLLNA 197 +NTI++ VL K + D +L Sbjct: 926 KNTIEQRVLAMQAQKRELFDQVLRG 950 >gi|220930817|ref|YP_002507726.1| SNF2-related protein [Clostridium cellulolyticum H10] gi|220001145|gb|ACL77746.1| SNF2-related protein [Clostridium cellulolyticum H10] Length = 1077 Score = 136 bits (342), Expect = 2e-30, Method: Composition-based stats. Identities = 36/184 (19%), Positives = 69/184 (37%), Gaps = 21/184 (11%) Query: 26 ASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLAR 83 S + QL + + E K+ L+ I+ + + I++ F S LA Sbjct: 884 LSVLTRLRQLCCHPSLFVDN---YEGDSGKLLLLKEIVGDSLTSGHRILLFSQFTSMLAI 940 Query: 84 LQK----------AFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILV 133 +++ D+ + +N G+ + S G GLNL G + ++ Sbjct: 941 IRQWLQEDGIDYLYLDGSTPADERMKMVTNFNNGQGQIFLLSLKSGGTGLNLT-GADTVI 999 Query: 134 FFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDL 193 + WW+ Q +R + G + V V L+ TI+E +L K + D Sbjct: 1000 HYDPWWNPAVEDQATDR-----AYRIGQLKTVHVMKLVTHGTIEEKILHLKDRKKQLVDA 1054 Query: 194 LLNA 197 ++ + Sbjct: 1055 VIQS 1058 >gi|302525636|ref|ZP_07277978.1| LOW QUALITY PROTEIN: SNF2/RAD54 family helicase [Streptomyces sp. AA4] gi|302434531|gb|EFL06347.1| LOW QUALITY PROTEIN: SNF2/RAD54 family helicase [Streptomyces sp. AA4] Length = 713 Score = 136 bits (342), Expect = 2e-30, Method: Composition-based stats. Identities = 40/210 (19%), Positives = 73/210 (34%), Gaps = 21/210 (10%) Query: 3 QYHKFQRELYCDLQGEN--IEAFNSASKTVKCLQLANG-AVYYDEEKHWKEVHDEKIKAL 59 Y RE ++ + Q+ N A Y E K+ A Sbjct: 488 LYEAVVRENLAQIREAQGVQRRGQVLKLLTELKQICNHPAHYLKESAGVLSGRSGKLAAF 547 Query: 60 EVIIEK--ANAAPIIVAYHFNSDLAR---------LQKAFPQGRT-LDKDPCTIQEWNEG 107 E +++ ++V + L A G + + + G Sbjct: 548 EELLDVILDEGESVLVFSQYVRLCRLLERRLAERGLPTALLSGEVGPKQRDEMVAAFQSG 607 Query: 108 KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFV 167 ++P+ + G GLNL + ++ + WW+ Q +R + G R V V Sbjct: 608 EVPVFLLSLKAGGVGLNLTQATH-VIHYDRWWNPAVEDQATDR-----AYRIGQDRPVQV 661 Query: 168 YYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + LIA+ T++E + L TK + D ++ A Sbjct: 662 HRLIAEGTLEERIAAVLETKRGLADAVVGA 691 >gi|307323253|ref|ZP_07602463.1| SNF2-related protein [Streptomyces violaceusniger Tu 4113] gi|306890742|gb|EFN21718.1| SNF2-related protein [Streptomyces violaceusniger Tu 4113] Length = 978 Score = 136 bits (342), Expect = 2e-30, Method: Composition-based stats. Identities = 40/209 (19%), Positives = 83/209 (39%), Gaps = 23/209 (11%) Query: 3 QYHKFQRELYCDLQGENIEAFNSA--SKTVKCLQLANG-AVYYDEEKHWKEVHDEKIKAL 59 Y RE+ ++ G Q+ N A Y E++ K++ L Sbjct: 751 LYEAVVREILAEISGTGGLVRRGLIVKLLTGLKQICNHPAQYLKEDRPVIPGRSGKLELL 810 Query: 60 EVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGR-----------TLDKDPCTIQEWNE 106 + +++ A A ++V + AR+ + R + + ++ + + Sbjct: 811 DELLDTILAEGASVLVFTQYVQM-ARILEGHLAARGVPTQLLHGGTPVARREEMVRSFQD 869 Query: 107 GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVF 166 G++P+ + G GLNL G+ +V + WW+ Q +R + G + V Sbjct: 870 GEVPVFLLSLKAAGTGLNLTRAGH-VVHYDRWWNPAVEAQATDR-----AYRIGQTQPVQ 923 Query: 167 VYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 V+ +IA+ T+++ + L K + D +L Sbjct: 924 VHRIIAEGTVEDRIAAMLTRKQELADAVL 952 >gi|229172496|ref|ZP_04300055.1| Helicase, SWF/SNF [Bacillus cereus MM3] gi|228610967|gb|EEK68230.1| Helicase, SWF/SNF [Bacillus cereus MM3] Length = 1064 Score = 136 bits (342), Expect = 2e-30, Method: Composition-based stats. Identities = 43/206 (20%), Positives = 81/206 (39%), Gaps = 25/206 (12%) Query: 6 KFQRELYCDLQGENI--EAFNSASKTVKCLQLANG-AVYYDEEKHWKEVHDEKIKALEVI 62 K + E L + + + + Q+ N A++ D+ K K + L I Sbjct: 849 KLREETLKHLDKDTLRKNKIRILAGLTRLRQICNHPALFVDDYK----GSSAKFEQLLEI 904 Query: 63 IEK--ANAAPIIVAYHFNSDL---------ARLQKAFPQGRTLDKDPCTI-QEWNEGKIP 110 +E+ + I++ F L + + G T ++ + +NEG+ Sbjct: 905 LEECRSTGKRILIFSQFTKMLSIIGRELNRQAIPYFYLDGSTPSQERVELCNRFNEGEGD 964 Query: 111 LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYL 170 L + G GLNL G + ++ + LWW+ QQ +R + G K V V L Sbjct: 965 LFLISLKAGGTGLNLT-GADTVILYDLWWNPAVEQQAADR-----AYRMGQKNTVQVIKL 1018 Query: 171 IAQNTIDELVLQRLRTKSTIQDLLLN 196 +A TI+E + + +K + ++ Sbjct: 1019 VAHGTIEEKMHELQESKKNLIAEVIE 1044 >gi|86741104|ref|YP_481504.1| SNF2-related [Frankia sp. CcI3] gi|86567966|gb|ABD11775.1| SNF2-related [Frankia sp. CcI3] Length = 1163 Score = 136 bits (342), Expect = 2e-30, Method: Composition-based stats. Identities = 46/207 (22%), Positives = 82/207 (39%), Gaps = 21/207 (10%) Query: 2 KQYHKFQRELYCDLQGE-NIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 + Y + +R+ L + N F QL+ A D+ H ++ KI AL Sbjct: 947 QTYLQRERQKVLGLVDDMNRNRFTILRSLTLLRQLSLHAGLVDD--HHADLPCAKIDALF 1004 Query: 61 VIIEK--ANAAPIIVAYHFNSDL----ARL-----QKAFPQGRTLDKDPCTIQEWNEGKI 109 + + +V F L RL + + GRT D+ ++ + G Sbjct: 1005 EQLTDVVDSGHRALVFSQFTGFLGKVRERLSALGVEHCYLDGRTRDR-STVLERFKTGSA 1063 Query: 110 PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYY 169 P+ + G GLNL + WW+ +Q ++R + G R V VY Sbjct: 1064 PVFLVSLKAGGFGLNLTE-ADYCFLLDPWWNPATEEQAVDR-----THRIGQSRNVMVYR 1117 Query: 170 LIAQNTIDELVLQRLRTKSTIQDLLLN 196 L+A++TI+E V+ K+ + +++ Sbjct: 1118 LVARDTIEEKVMAMKDRKARLFSSVMD 1144 >gi|228984941|ref|ZP_04145110.1| Helicase, SWF/SNF [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] gi|228774764|gb|EEM23161.1| Helicase, SWF/SNF [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] Length = 1064 Score = 136 bits (342), Expect = 2e-30, Method: Composition-based stats. Identities = 43/206 (20%), Positives = 81/206 (39%), Gaps = 25/206 (12%) Query: 6 KFQRELYCDLQGENI--EAFNSASKTVKCLQLANG-AVYYDEEKHWKEVHDEKIKALEVI 62 K + E L + + + + Q+ A++ D+ K K + L I Sbjct: 849 KLREETLKHLDKDTLRKNKIRILAGLTRLRQICCHPALFVDDYK----GSSAKFEQLLDI 904 Query: 63 IEK--ANAAPIIVAYHFNSDLARL-----QKAFPQGRTLDKDPCTIQ-----EWNEGKIP 110 +E+ + I++ F L+ + ++A P P + +NEG+ Sbjct: 905 LEECRSTGKRILIFSQFTKMLSIIGRELNRQAIPYFYLDGNTPSQERVELCNRFNEGEGD 964 Query: 111 LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYL 170 L + G GLNL G + ++ + LWW+ QQ +R + G K V V L Sbjct: 965 LFLISLKAGGTGLNLT-GADTVILYDLWWNPAVEQQAADR-----AYRMGQKNTVQVIKL 1018 Query: 171 IAQNTIDELVLQRLRTKSTIQDLLLN 196 +A TI+E + + +K + ++ Sbjct: 1019 VAHGTIEEKMHELQESKKNLIAEVIE 1044 >gi|49481102|ref|YP_035985.1| SWF/SNF family helicase [Bacillus thuringiensis serovar konkukian str. 97-27] gi|49332658|gb|AAT63304.1| helicase, SWF/SNF family [Bacillus thuringiensis serovar konkukian str. 97-27] Length = 1064 Score = 136 bits (342), Expect = 2e-30, Method: Composition-based stats. Identities = 43/206 (20%), Positives = 81/206 (39%), Gaps = 25/206 (12%) Query: 6 KFQRELYCDLQGENI--EAFNSASKTVKCLQLANG-AVYYDEEKHWKEVHDEKIKALEVI 62 K + E L + + + + Q+ A++ D+ K K + L I Sbjct: 849 KLREETLKHLDKDTLRKNKIRILAGLTRLRQICCHPALFVDDYK----GSSAKFEQLLDI 904 Query: 63 IEK--ANAAPIIVAYHFNSDLARL-----QKAFPQGRTLDKDPCTIQ-----EWNEGKIP 110 +E+ + I++ F L+ + ++A P P + +NEG+ Sbjct: 905 LEECRSTGKRILIFSQFTKMLSIIGRELNRQAIPYFYLDGNTPSQERVELCNRFNEGEGD 964 Query: 111 LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYL 170 L + G GLNL G + ++ + LWW+ QQ +R + G K V V L Sbjct: 965 LFLISLKAGGTGLNLT-GADTVILYDLWWNPAVEQQAADR-----AYRMGQKNTVQVIKL 1018 Query: 171 IAQNTIDELVLQRLRTKSTIQDLLLN 196 +A TI+E + + +K + ++ Sbjct: 1019 VAHGTIEEKMHELQESKKNLIAEVIE 1044 >gi|229155427|ref|ZP_04283536.1| Helicase, SWF/SNF [Bacillus cereus ATCC 4342] gi|228627988|gb|EEK84706.1| Helicase, SWF/SNF [Bacillus cereus ATCC 4342] Length = 1064 Score = 136 bits (342), Expect = 2e-30, Method: Composition-based stats. Identities = 43/206 (20%), Positives = 81/206 (39%), Gaps = 25/206 (12%) Query: 6 KFQRELYCDLQGENI--EAFNSASKTVKCLQLANG-AVYYDEEKHWKEVHDEKIKALEVI 62 K + E L + + + + Q+ A++ D+ K K + L I Sbjct: 849 KLREETLKHLDKDTLRKNKIRILAGLTRLRQICCHPALFVDDYK----GSSAKFEQLLDI 904 Query: 63 IEK--ANAAPIIVAYHFNSDLARL-----QKAFPQGRTLDKDPCTIQ-----EWNEGKIP 110 +E+ + I++ F L+ + ++A P P + +NEG+ Sbjct: 905 LEECRSTGKRILIFSQFTKMLSIIGRELNRQAIPYFYLDGNTPSQERVELCNRFNEGEGD 964 Query: 111 LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYL 170 L + G GLNL G + ++ + LWW+ QQ +R + G K V V L Sbjct: 965 LFLISLKAGGTGLNLT-GADTVILYDLWWNPAVEQQAADR-----AYRMGQKNTVQVIKL 1018 Query: 171 IAQNTIDELVLQRLRTKSTIQDLLLN 196 +A TI+E + + +K + ++ Sbjct: 1019 VAHGTIEEKMHELQESKKNLIAEVIE 1044 >gi|229196057|ref|ZP_04322809.1| Helicase, SWF/SNF [Bacillus cereus m1293] gi|228587439|gb|EEK45505.1| Helicase, SWF/SNF [Bacillus cereus m1293] Length = 1064 Score = 136 bits (342), Expect = 2e-30, Method: Composition-based stats. Identities = 43/206 (20%), Positives = 81/206 (39%), Gaps = 25/206 (12%) Query: 6 KFQRELYCDLQGENI--EAFNSASKTVKCLQLANG-AVYYDEEKHWKEVHDEKIKALEVI 62 K + E L + + + + Q+ A++ D+ K K + L I Sbjct: 849 KLREETLKHLDKDTLRKNKIRILAGLTRLRQICCHPALFVDDYK----GSSAKFEQLLDI 904 Query: 63 IEK--ANAAPIIVAYHFNSDLARL-----QKAFPQGRTLDKDPCTIQ-----EWNEGKIP 110 +E+ + I++ F L+ + ++A P P + +NEG+ Sbjct: 905 LEECRSTGKRILIFSQFTKMLSIIGRELNRQAIPYFYLDGNTPSQERVELCNRFNEGEGD 964 Query: 111 LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYL 170 L + G GLNL G + ++ + LWW+ QQ +R + G K V V L Sbjct: 965 LFLISLKAGGTGLNLT-GADTVILYDLWWNPAVEQQAADR-----AYRMGQKNTVQVIKL 1018 Query: 171 IAQNTIDELVLQRLRTKSTIQDLLLN 196 +A TI+E + + +K + ++ Sbjct: 1019 VAHGTIEEKMHELQESKKNLIAEVIE 1044 >gi|324325873|gb|ADY21133.1| helicase, putative [Bacillus thuringiensis serovar finitimus YBT-020] Length = 1064 Score = 136 bits (342), Expect = 2e-30, Method: Composition-based stats. Identities = 43/206 (20%), Positives = 81/206 (39%), Gaps = 25/206 (12%) Query: 6 KFQRELYCDLQGENI--EAFNSASKTVKCLQLANG-AVYYDEEKHWKEVHDEKIKALEVI 62 K + E L + + + + Q+ A++ D+ K K + L I Sbjct: 849 KLREETLKHLDKDTLRKNKIRILAGLTRLRQICCHPALFVDDYK----GSSAKFEQLLDI 904 Query: 63 IEK--ANAAPIIVAYHFNSDLARL-----QKAFPQGRTLDKDPCTIQ-----EWNEGKIP 110 +E+ + I++ F L+ + ++A P P + +NEG+ Sbjct: 905 LEECRSTGKRILIFSQFTKMLSIIGRELNRQAIPYFYLDGNTPSQERVELCNRFNEGEGD 964 Query: 111 LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYL 170 L + G GLNL G + ++ + LWW+ QQ +R + G K V V L Sbjct: 965 LFLISLKAGGTGLNLT-GADTVILYDLWWNPAVEQQAADR-----AYRMGQKNTVQVIKL 1018 Query: 171 IAQNTIDELVLQRLRTKSTIQDLLLN 196 +A TI+E + + +K + ++ Sbjct: 1019 VAHGTIEEKMHELQESKKNLIAEVIE 1044 >gi|301053386|ref|YP_003791597.1| helicase, SWF/SNF family [Bacillus anthracis CI] gi|300375555|gb|ADK04459.1| helicase, SWF/SNF family [Bacillus cereus biovar anthracis str. CI] Length = 1064 Score = 135 bits (341), Expect = 2e-30, Method: Composition-based stats. Identities = 43/206 (20%), Positives = 81/206 (39%), Gaps = 25/206 (12%) Query: 6 KFQRELYCDLQGENI--EAFNSASKTVKCLQLANG-AVYYDEEKHWKEVHDEKIKALEVI 62 K + E L + + + + Q+ A++ D+ K K + L I Sbjct: 849 KLREETLKHLDKDTLRKNKIRILAGLTRLRQICCHPALFVDDYK----GSSAKFEQLLDI 904 Query: 63 IEK--ANAAPIIVAYHFNSDLARL-----QKAFPQGRTLDKDPCTIQ-----EWNEGKIP 110 +E+ + I++ F L+ + ++A P P + +NEG+ Sbjct: 905 LEECRSTGKRILIFSQFTKMLSIIGRELNRQAIPYFYLDGNTPSQERVELCNRFNEGEGD 964 Query: 111 LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYL 170 L + G GLNL G + ++ + LWW+ QQ +R + G K V V L Sbjct: 965 LFLISLKAGGTGLNLT-GADTVILYDLWWNPAVEQQAADR-----AYRMGQKNTVQVIKL 1018 Query: 171 IAQNTIDELVLQRLRTKSTIQDLLLN 196 +A TI+E + + +K + ++ Sbjct: 1019 VAHGTIEEKMHELQESKKNLIAEVIE 1044 >gi|228945457|ref|ZP_04107809.1| Helicase, SWF/SNF [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] gi|228814210|gb|EEM60479.1| Helicase, SWF/SNF [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] Length = 1064 Score = 135 bits (341), Expect = 2e-30, Method: Composition-based stats. Identities = 43/206 (20%), Positives = 81/206 (39%), Gaps = 25/206 (12%) Query: 6 KFQRELYCDLQGENI--EAFNSASKTVKCLQLANG-AVYYDEEKHWKEVHDEKIKALEVI 62 K + E L + + + + Q+ A++ D+ K K + L I Sbjct: 849 KLREETLKHLDKDTLRKNKIRILAGLTRLRQICCHPALFVDDYK----GSSAKFEQLLDI 904 Query: 63 IEK--ANAAPIIVAYHFNSDLARL-----QKAFPQGRTLDKDPCTIQ-----EWNEGKIP 110 +E+ + I++ F L+ + ++A P P + +NEG+ Sbjct: 905 LEECRSTGKRILIFSQFTKMLSIIGRELNRQAIPYFYLDGNTPSQERVELCNRFNEGEGD 964 Query: 111 LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYL 170 L + G GLNL G + ++ + LWW+ QQ +R + G K V V L Sbjct: 965 LFLISLKAGGTGLNLT-GADTVILYDLWWNPAVEQQAADR-----AYRMGQKNTVQVIKL 1018 Query: 171 IAQNTIDELVLQRLRTKSTIQDLLLN 196 +A TI+E + + +K + ++ Sbjct: 1019 VAHGTIEEKMHELQESKKNLIAEVIE 1044 >gi|254723933|ref|ZP_05185719.1| putative helicase [Bacillus anthracis str. A1055] Length = 1064 Score = 135 bits (341), Expect = 2e-30, Method: Composition-based stats. Identities = 43/206 (20%), Positives = 81/206 (39%), Gaps = 25/206 (12%) Query: 6 KFQRELYCDLQGENI--EAFNSASKTVKCLQLANG-AVYYDEEKHWKEVHDEKIKALEVI 62 K + E L + + + + Q+ A++ D+ K K + L I Sbjct: 849 KLREETLKHLDKDTLRKNKIRILAGLTRLRQICCHPALFVDDYK----GSSAKFEQLLDI 904 Query: 63 IEK--ANAAPIIVAYHFNSDLARL-----QKAFPQGRTLDKDPCTIQ-----EWNEGKIP 110 +E+ + I++ F L+ + ++A P P + +NEG+ Sbjct: 905 LEECRSTGKRILIFSQFTKMLSIIGRELNRQAIPYFYLDGNTPSQERVELCNRFNEGEGD 964 Query: 111 LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYL 170 L + G GLNL G + ++ + LWW+ QQ +R + G K V V L Sbjct: 965 LFLISLKAGGTGLNLT-GADTVILYDLWWNPAVEQQAADR-----AYRMGQKNTVQVIKL 1018 Query: 171 IAQNTIDELVLQRLRTKSTIQDLLLN 196 +A TI+E + + +K + ++ Sbjct: 1019 VAHGTIEEKMHELQESKKNLIAEVIE 1044 >gi|228933137|ref|ZP_04095994.1| Helicase, SWF/SNF [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1] gi|228826494|gb|EEM72270.1| Helicase, SWF/SNF [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1] Length = 1064 Score = 135 bits (341), Expect = 2e-30, Method: Composition-based stats. Identities = 43/206 (20%), Positives = 81/206 (39%), Gaps = 25/206 (12%) Query: 6 KFQRELYCDLQGENI--EAFNSASKTVKCLQLANG-AVYYDEEKHWKEVHDEKIKALEVI 62 K + E L + + + + Q+ A++ D+ K K + L I Sbjct: 849 KLREETLKHLDKDTLRKNKIRILAGLTRLRQICCHPALFVDDYK----GSSAKFEQLLDI 904 Query: 63 IEK--ANAAPIIVAYHFNSDLARL-----QKAFPQGRTLDKDPCTIQ-----EWNEGKIP 110 +E+ + I++ F L+ + ++A P P + +NEG+ Sbjct: 905 LEECRSTGKRILIFSQFTKMLSIIGRELNRQAIPYFYLDGNTPSQERVELCNRFNEGEGD 964 Query: 111 LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYL 170 L + G GLNL G + ++ + LWW+ QQ +R + G K V V L Sbjct: 965 LFLISLKAGGTGLNLT-GADTVILYDLWWNPAVEQQAADR-----AYRMGQKNTVQVIKL 1018 Query: 171 IAQNTIDELVLQRLRTKSTIQDLLLN 196 +A TI+E + + +K + ++ Sbjct: 1019 VAHGTIEEKMHELQESKKNLIAEVIE 1044 >gi|229090820|ref|ZP_04222049.1| Helicase, SWF/SNF [Bacillus cereus Rock3-42] gi|228692523|gb|EEL46253.1| Helicase, SWF/SNF [Bacillus cereus Rock3-42] Length = 1064 Score = 135 bits (341), Expect = 2e-30, Method: Composition-based stats. Identities = 43/206 (20%), Positives = 81/206 (39%), Gaps = 25/206 (12%) Query: 6 KFQRELYCDLQGENI--EAFNSASKTVKCLQLANG-AVYYDEEKHWKEVHDEKIKALEVI 62 K + E L + + + + Q+ A++ D+ K K + L I Sbjct: 849 KLREETLKHLDKDTLRKNKIRILAGLTRLRQICCHPALFVDDYK----GSSAKFEQLLDI 904 Query: 63 IEK--ANAAPIIVAYHFNSDLARL-----QKAFPQGRTLDKDPCTIQ-----EWNEGKIP 110 +E+ + I++ F L+ + ++A P P + +NEG+ Sbjct: 905 LEECRSTGKRILIFSQFTKMLSIIGRELNRQAIPYFYLDGNTPSQERVELCNRFNEGEGD 964 Query: 111 LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYL 170 L + G GLNL G + ++ + LWW+ QQ +R + G K V V L Sbjct: 965 LFLISLKAGGTGLNLT-GADTVILYDLWWNPAVEQQAADR-----AYRMGQKNTVQVIKL 1018 Query: 171 IAQNTIDELVLQRLRTKSTIQDLLLN 196 +A TI+E + + +K + ++ Sbjct: 1019 VAHGTIEEKMHELQESKKNLIAEVIE 1044 >gi|222095476|ref|YP_002529536.1| helicase, putative [Bacillus cereus Q1] gi|221239534|gb|ACM12244.1| helicase, putative [Bacillus cereus Q1] Length = 1064 Score = 135 bits (341), Expect = 2e-30, Method: Composition-based stats. Identities = 43/206 (20%), Positives = 81/206 (39%), Gaps = 25/206 (12%) Query: 6 KFQRELYCDLQGENI--EAFNSASKTVKCLQLANG-AVYYDEEKHWKEVHDEKIKALEVI 62 K + E L + + + + Q+ A++ D+ K K + L I Sbjct: 849 KLREETLKHLDKDTLRKNKIRILAGLTRLRQICCHPALFVDDYK----GSSAKFEQLLDI 904 Query: 63 IEK--ANAAPIIVAYHFNSDLARL-----QKAFPQGRTLDKDPCTIQ-----EWNEGKIP 110 +E+ + I++ F L+ + ++A P P + +NEG+ Sbjct: 905 LEECRSTGKRILIFSQFTKMLSIIGRELNRQAIPYFYLDGNTPSQERVELCNRFNEGEGD 964 Query: 111 LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYL 170 L + G GLNL G + ++ + LWW+ QQ +R + G K V V L Sbjct: 965 LFLISLKAGGTGLNLT-GADTVILYDLWWNPAVEQQAADR-----AYRMGQKNTVQVIKL 1018 Query: 171 IAQNTIDELVLQRLRTKSTIQDLLLN 196 +A TI+E + + +K + ++ Sbjct: 1019 VAHGTIEEKMHELQESKKNLIAEVIE 1044 >gi|196033339|ref|ZP_03100751.1| putative helicase [Bacillus cereus W] gi|195993773|gb|EDX57729.1| putative helicase [Bacillus cereus W] Length = 1064 Score = 135 bits (341), Expect = 2e-30, Method: Composition-based stats. Identities = 43/206 (20%), Positives = 81/206 (39%), Gaps = 25/206 (12%) Query: 6 KFQRELYCDLQGENI--EAFNSASKTVKCLQLANG-AVYYDEEKHWKEVHDEKIKALEVI 62 K + E L + + + + Q+ A++ D+ K K + L I Sbjct: 849 KLREETLKHLDKDTLRKNKIRILAGLTRLRQICCHPALFVDDYK----GSSAKFEQLLDI 904 Query: 63 IEK--ANAAPIIVAYHFNSDLARL-----QKAFPQGRTLDKDPCTIQ-----EWNEGKIP 110 +E+ + I++ F L+ + ++A P P + +NEG+ Sbjct: 905 LEECRSTGKRILIFSQFTKMLSIIGRELNRQAIPYFYLDGNTPSQERVELCNRFNEGEGD 964 Query: 111 LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYL 170 L + G GLNL G + ++ + LWW+ QQ +R + G K V V L Sbjct: 965 LFLISLKAGGTGLNLT-GADTVILYDLWWNPAVEQQAADR-----AYRMGQKNTVQVIKL 1018 Query: 171 IAQNTIDELVLQRLRTKSTIQDLLLN 196 +A TI+E + + +K + ++ Sbjct: 1019 VAHGTIEEKMHELQESKKNLIAEVIE 1044 >gi|217959332|ref|YP_002337880.1| putative helicase [Bacillus cereus AH187] gi|229138547|ref|ZP_04267132.1| Helicase, SWF/SNF [Bacillus cereus BDRD-ST26] gi|217067719|gb|ACJ81969.1| putative helicase [Bacillus cereus AH187] gi|228644907|gb|EEL01154.1| Helicase, SWF/SNF [Bacillus cereus BDRD-ST26] Length = 1064 Score = 135 bits (341), Expect = 2e-30, Method: Composition-based stats. Identities = 43/206 (20%), Positives = 81/206 (39%), Gaps = 25/206 (12%) Query: 6 KFQRELYCDLQGENI--EAFNSASKTVKCLQLANG-AVYYDEEKHWKEVHDEKIKALEVI 62 K + E L + + + + Q+ A++ D+ K K + L I Sbjct: 849 KLREETLKHLDKDTLRKNKIRILAGLTRLRQICCHPALFVDDYK----GSSAKFEQLLDI 904 Query: 63 IEK--ANAAPIIVAYHFNSDLARL-----QKAFPQGRTLDKDPCTIQ-----EWNEGKIP 110 +E+ + I++ F L+ + ++A P P + +NEG+ Sbjct: 905 LEECRSTGKRILIFSQFTKMLSIIGRELNRQAIPYFYLDGNTPSQERVELCNRFNEGEGD 964 Query: 111 LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYL 170 L + G GLNL G + ++ + LWW+ QQ +R + G K V V L Sbjct: 965 LFLISLKAGGTGLNLT-GADTVILYDLWWNPAVEQQAADR-----AYRMGQKNTVQVIKL 1018 Query: 171 IAQNTIDELVLQRLRTKSTIQDLLLN 196 +A TI+E + + +K + ++ Sbjct: 1019 VAHGTIEEKMHELQESKKNLIAEVIE 1044 >gi|118477275|ref|YP_894426.1| SWF/SNF family helicase [Bacillus thuringiensis str. Al Hakam] gi|118416500|gb|ABK84919.1| helicase, SWF/SNF family [Bacillus thuringiensis str. Al Hakam] Length = 1064 Score = 135 bits (341), Expect = 2e-30, Method: Composition-based stats. Identities = 43/206 (20%), Positives = 81/206 (39%), Gaps = 25/206 (12%) Query: 6 KFQRELYCDLQGENI--EAFNSASKTVKCLQLANG-AVYYDEEKHWKEVHDEKIKALEVI 62 K + E L + + + + Q+ A++ D+ K K + L I Sbjct: 849 KLREETLKHLDKDTLRKNKIRILAGLTRLRQICCHPALFVDDYK----GSSAKFEQLLDI 904 Query: 63 IEK--ANAAPIIVAYHFNSDLARL-----QKAFPQGRTLDKDPCTIQ-----EWNEGKIP 110 +E+ + I++ F L+ + ++A P P + +NEG+ Sbjct: 905 LEECRSTGKRILIFSQFTKMLSIIGRELNRQAIPYFYLDGNTPSQERVELCNRFNEGEGD 964 Query: 111 LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYL 170 L + G GLNL G + ++ + LWW+ QQ +R + G K V V L Sbjct: 965 LFLISLKAGGTGLNLT-GADTVILYDLWWNPAVEQQAADR-----AYRMGQKNTVQVIKL 1018 Query: 171 IAQNTIDELVLQRLRTKSTIQDLLLN 196 +A TI+E + + +K + ++ Sbjct: 1019 VAHGTIEEKMHELQESKKNLIAEVIE 1044 >gi|218902968|ref|YP_002450802.1| putative helicase [Bacillus cereus AH820] gi|228930936|ref|ZP_04093897.1| Helicase, SWF/SNF [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] gi|229121402|ref|ZP_04250630.1| Helicase, SWF/SNF [Bacillus cereus 95/8201] gi|218535984|gb|ACK88382.1| putative helicase [Bacillus cereus AH820] gi|228662045|gb|EEL17657.1| Helicase, SWF/SNF [Bacillus cereus 95/8201] gi|228828715|gb|EEM74390.1| Helicase, SWF/SNF [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] Length = 1064 Score = 135 bits (341), Expect = 3e-30, Method: Composition-based stats. Identities = 43/206 (20%), Positives = 81/206 (39%), Gaps = 25/206 (12%) Query: 6 KFQRELYCDLQGENI--EAFNSASKTVKCLQLANG-AVYYDEEKHWKEVHDEKIKALEVI 62 K + E L + + + + Q+ A++ D+ K K + L I Sbjct: 849 KLREETLKHLDKDTLRKNKIRILAGLTRLRQICCHPALFVDDYK----GSSAKFEQLLDI 904 Query: 63 IEK--ANAAPIIVAYHFNSDLARL-----QKAFPQGRTLDKDPCTIQ-----EWNEGKIP 110 +E+ + I++ F L+ + ++A P P + +NEG+ Sbjct: 905 LEECRSTGKRILIFSQFTKMLSIIGRELNRQAIPYFYLDGNTPSQERVELCNRFNEGEGD 964 Query: 111 LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYL 170 L + G GLNL G + ++ + LWW+ QQ +R + G K V V L Sbjct: 965 LFLISLKAGGTGLNLT-GADTVILYDLWWNPAVEQQAADR-----AYRMGQKNTVQVIKL 1018 Query: 171 IAQNTIDELVLQRLRTKSTIQDLLLN 196 +A TI+E + + +K + ++ Sbjct: 1019 VAHGTIEEKMHELQESKKNLIAEVIE 1044 >gi|196045190|ref|ZP_03112423.1| putative helicase [Bacillus cereus 03BB108] gi|229184042|ref|ZP_04311255.1| Helicase, SWF/SNF [Bacillus cereus BGSC 6E1] gi|196024192|gb|EDX62866.1| putative helicase [Bacillus cereus 03BB108] gi|228599425|gb|EEK57032.1| Helicase, SWF/SNF [Bacillus cereus BGSC 6E1] Length = 1064 Score = 135 bits (341), Expect = 3e-30, Method: Composition-based stats. Identities = 43/206 (20%), Positives = 81/206 (39%), Gaps = 25/206 (12%) Query: 6 KFQRELYCDLQGENI--EAFNSASKTVKCLQLANG-AVYYDEEKHWKEVHDEKIKALEVI 62 K + E L + + + + Q+ A++ D+ K K + L I Sbjct: 849 KLREETLKHLDKDTLRKNKIRILAGLTRLRQICCHPALFVDDYK----GSSAKFEQLLDI 904 Query: 63 IEK--ANAAPIIVAYHFNSDLARL-----QKAFPQGRTLDKDPCTIQ-----EWNEGKIP 110 +E+ + I++ F L+ + ++A P P + +NEG+ Sbjct: 905 LEECRSTGKRILIFSQFTKMLSIIGRELNRQAIPYFYLDGNTPSQERVELCNRFNEGEGD 964 Query: 111 LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYL 170 L + G GLNL G + ++ + LWW+ QQ +R + G K V V L Sbjct: 965 LFLISLKAGGTGLNLT-GADTVILYDLWWNPAVEQQAADR-----AYRMGQKNTVQVIKL 1018 Query: 171 IAQNTIDELVLQRLRTKSTIQDLLLN 196 +A TI+E + + +K + ++ Sbjct: 1019 VAHGTIEEKMHELQESKKNLIAEVIE 1044 >gi|52143616|ref|YP_083212.1| SWF/SNF family helicase [Bacillus cereus E33L] gi|51977085|gb|AAU18635.1| helicase, SWF/SNF family [Bacillus cereus E33L] Length = 1064 Score = 135 bits (341), Expect = 3e-30, Method: Composition-based stats. Identities = 43/206 (20%), Positives = 81/206 (39%), Gaps = 25/206 (12%) Query: 6 KFQRELYCDLQGENI--EAFNSASKTVKCLQLANG-AVYYDEEKHWKEVHDEKIKALEVI 62 K + E L + + + + Q+ A++ D+ K K + L I Sbjct: 849 KLREETLKHLDKDTLRKNKIRILAGLTRLRQICCHPALFVDDYK----GSSAKFEQLLDI 904 Query: 63 IEK--ANAAPIIVAYHFNSDLARL-----QKAFPQGRTLDKDPCTIQ-----EWNEGKIP 110 +E+ + I++ F L+ + ++A P P + +NEG+ Sbjct: 905 LEECRSTGKRILIFSQFTKMLSIIGRELNRQAIPYFYLDGNTPSQERVELCNRFNEGEGD 964 Query: 111 LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYL 170 L + G GLNL G + ++ + LWW+ QQ +R + G K V V L Sbjct: 965 LFLISLKAGGTGLNLT-GADTVILYDLWWNPAVEQQAADR-----AYRMGQKNTVQVIKL 1018 Query: 171 IAQNTIDELVLQRLRTKSTIQDLLLN 196 +A TI+E + + +K + ++ Sbjct: 1019 VAHGTIEEKMHELQESKKNLIAEVIE 1044 >gi|330808510|ref|YP_004352972.1| Putative non-specific serine/threonine protein [Pseudomonas brassicacearum subsp. brassicacearum NFM421] gi|327376618|gb|AEA67968.1| Putative non-specific serine/threonine protein [Pseudomonas brassicacearum subsp. brassicacearum NFM421] Length = 897 Score = 135 bits (341), Expect = 3e-30, Method: Composition-based stats. Identities = 38/181 (20%), Positives = 78/181 (43%), Gaps = 19/181 (10%) Query: 29 TVKCLQLANGA-VYYDEEKHWKEVHDEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQ 85 +K Q+ + D + K+ +L ++E+ +++ F S LA ++ Sbjct: 697 LLKLRQVCCDLRLINDATLPARGSTSGKLDSLMEMLEELFEEGRRVLLFSQFTSMLALIE 756 Query: 86 KAFPQ---------GRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFS 136 + + G+T D+ ++E+ GK + + G GLNL + ++ + Sbjct: 757 EELKKRGVEYAILTGQTRDRR-TPVKEFQSGKRQIFLISLKAGGVGLNLTE-ADTVIHYD 814 Query: 137 LWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 WW+ Q +R + G ++ VFVY LIA+ T++E + + KS + +L+ Sbjct: 815 PWWNPATENQATDR-----AYRIGQEKPVFVYKLIARGTVEEKIQLLQKEKSDLAAGVLD 869 Query: 197 A 197 Sbjct: 870 G 870 >gi|303240851|ref|ZP_07327363.1| SNF2-related protein [Acetivibrio cellulolyticus CD2] gi|302591579|gb|EFL61315.1| SNF2-related protein [Acetivibrio cellulolyticus CD2] Length = 969 Score = 135 bits (341), Expect = 3e-30, Method: Composition-based stats. Identities = 38/207 (18%), Positives = 75/207 (36%), Gaps = 25/207 (12%) Query: 4 YHKFQRELYCDLQGENIEA--FNSASKTVKCLQLANG-AVYYDEEKHWKEVHDEKIKALE 60 Y F+ EL ++ IE + + Q+ A + D+ K++ Sbjct: 753 YKSFKEELIPKIEEFGIEKNHIEILAALTRLRQICAHPATFLDD----YTGGSGKLELAM 808 Query: 61 VIIEKA--NAAPIIVAYHFNSDLARLQKAFPQGRTL----------DKDPCTIQEWNEGK 108 II ++ + I+V F L ++ ++ I +N + Sbjct: 809 DIIIQSIDSGHSILVFSQFTKMLKIIRNELENSGINYYYLDGSMKPEERMMEIDNFNSDR 868 Query: 109 IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVY 168 + + G GLNL ++++ F WW+ Q +R + G K V VY Sbjct: 869 EAVFLISLKAGGTGLNLTK-ADVIIHFDPWWNPAVEDQASDR-----AHRMGQKNVVQVY 922 Query: 169 YLIAQNTIDELVLQRLRTKSTIQDLLL 195 L+ + TI+E + K + + ++ Sbjct: 923 KLLTEGTIEEKIANLQDRKRDLIESII 949 >gi|225863710|ref|YP_002749088.1| putative helicase [Bacillus cereus 03BB102] gi|225786052|gb|ACO26269.1| putative helicase [Bacillus cereus 03BB102] Length = 1064 Score = 135 bits (341), Expect = 3e-30, Method: Composition-based stats. Identities = 43/206 (20%), Positives = 81/206 (39%), Gaps = 25/206 (12%) Query: 6 KFQRELYCDLQGENI--EAFNSASKTVKCLQLANG-AVYYDEEKHWKEVHDEKIKALEVI 62 K + E L + + + + Q+ A++ D+ K K + L I Sbjct: 849 KLREETLKHLDKDTLRKNKIRILAGLTRLRQICCHPALFVDDYK----GSSAKFEQLLDI 904 Query: 63 IEK--ANAAPIIVAYHFNSDLARL-----QKAFPQGRTLDKDPCTIQ-----EWNEGKIP 110 +E+ + I++ F L+ + ++A P P + +NEG+ Sbjct: 905 LEECRSTGKRILIFSQFTKMLSIIGRELNRQAIPYFYLDGNTPSQERVELCNRFNEGEGD 964 Query: 111 LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYL 170 L + G GLNL G + ++ + LWW+ QQ +R + G K V V L Sbjct: 965 LFLISLKAGGTGLNLT-GADTVILYDLWWNPAVEQQAADR-----AYRMGQKNTVQVIKL 1018 Query: 171 IAQNTIDELVLQRLRTKSTIQDLLLN 196 +A TI+E + + +K + ++ Sbjct: 1019 VAHGTIEEKMHELQESKKNLIAEVIE 1044 >gi|206975015|ref|ZP_03235930.1| putative helicase [Bacillus cereus H3081.97] gi|206747034|gb|EDZ58426.1| putative helicase [Bacillus cereus H3081.97] Length = 1064 Score = 135 bits (341), Expect = 3e-30, Method: Composition-based stats. Identities = 43/206 (20%), Positives = 81/206 (39%), Gaps = 25/206 (12%) Query: 6 KFQRELYCDLQGENI--EAFNSASKTVKCLQLANG-AVYYDEEKHWKEVHDEKIKALEVI 62 K + E L + + + + Q+ A++ D+ K K + L I Sbjct: 849 KLREETLKHLDKDTLRKNKIRILAGLTRLRQICCHPALFVDDYK----GSSAKFEQLLDI 904 Query: 63 IEK--ANAAPIIVAYHFNSDLARL-----QKAFPQGRTLDKDPCTIQ-----EWNEGKIP 110 +E+ + I++ F L+ + ++A P P + +NEG+ Sbjct: 905 LEECRSTGKRILIFSQFTKMLSIIGRELNRQAIPYFYLDGNTPSQERVELCNRFNEGEGD 964 Query: 111 LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYL 170 L + G GLNL G + ++ + LWW+ QQ +R + G K V V L Sbjct: 965 LFLISLKAGGTGLNLT-GADTVILYDLWWNPAVEQQAADR-----AYRMGQKNTVQVIKL 1018 Query: 171 IAQNTIDELVLQRLRTKSTIQDLLLN 196 +A TI+E + + +K + ++ Sbjct: 1019 VAHGTIEEKMHELQESKKNLIAEVIE 1044 >gi|229189952|ref|ZP_04316960.1| Helicase, SWF/SNF [Bacillus cereus ATCC 10876] gi|228593444|gb|EEK51255.1| Helicase, SWF/SNF [Bacillus cereus ATCC 10876] Length = 1064 Score = 135 bits (341), Expect = 3e-30, Method: Composition-based stats. Identities = 42/206 (20%), Positives = 80/206 (38%), Gaps = 25/206 (12%) Query: 6 KFQRELYCDLQGENI--EAFNSASKTVKCLQLANG-AVYYDEEKHWKEVHDEKIKALEVI 62 K + E L + + + + Q+ A++ D+ K K + L I Sbjct: 849 KLREETLKHLDKDTLRKNKIRILAGLTRLRQICCHPALFVDDYK----GSSAKFEQLLEI 904 Query: 63 IEK--ANAAPIIVAYHFNSDL---------ARLQKAFPQGRTLDKDPCTI-QEWNEGKIP 110 +E+ + I++ F L + + G T ++ + +NEG+ Sbjct: 905 LEECRSTGKRILIFSQFTKMLSIIGRELNHQAIPYFYLDGSTPAQERVELCDRFNEGEGD 964 Query: 111 LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYL 170 L + G GLNL G + ++ + LWW+ QQ +R + G K V V L Sbjct: 965 LFLISLKAGGTGLNLT-GADTVILYDLWWNPAVEQQAADR-----AYRMGQKNTVQVIKL 1018 Query: 171 IAQNTIDELVLQRLRTKSTIQDLLLN 196 +A TI+E + + +K + ++ Sbjct: 1019 VAHGTIEEKMHELQESKKNLIAEVIE 1044 >gi|206970802|ref|ZP_03231754.1| putative helicase [Bacillus cereus AH1134] gi|206734438|gb|EDZ51608.1| putative helicase [Bacillus cereus AH1134] Length = 1064 Score = 135 bits (341), Expect = 3e-30, Method: Composition-based stats. Identities = 42/206 (20%), Positives = 80/206 (38%), Gaps = 25/206 (12%) Query: 6 KFQRELYCDLQGENI--EAFNSASKTVKCLQLANG-AVYYDEEKHWKEVHDEKIKALEVI 62 K + E L + + + + Q+ A++ D+ K K + L I Sbjct: 849 KLREETLKHLDKDTLRKNKIRILAGLTRLRQICCHPALFVDDYK----GSSAKFEQLLEI 904 Query: 63 IEK--ANAAPIIVAYHFNSDL---------ARLQKAFPQGRTLDKDPCTI-QEWNEGKIP 110 +E+ + I++ F L + + G T ++ + +NEG+ Sbjct: 905 LEECRSTGKRILIFSQFTKMLSIIGRELNHQAIPYFYLDGSTPAQERVELCDRFNEGEGD 964 Query: 111 LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYL 170 L + G GLNL G + ++ + LWW+ QQ +R + G K V V L Sbjct: 965 LFLISLKAGGTGLNLT-GADTVILYDLWWNPAVEQQAADR-----AYRMGQKNTVQVIKL 1018 Query: 171 IAQNTIDELVLQRLRTKSTIQDLLLN 196 +A TI+E + + +K + ++ Sbjct: 1019 VAHGTIEEKMHELQESKKNLIAEVIE 1044 >gi|30261851|ref|NP_844228.1| helicase, putative [Bacillus anthracis str. Ames] gi|47527092|ref|YP_018441.1| helicase [Bacillus anthracis str. 'Ames Ancestor'] gi|49184685|ref|YP_027937.1| helicase [Bacillus anthracis str. Sterne] gi|165869343|ref|ZP_02214002.1| putative helicase [Bacillus anthracis str. A0488] gi|167633415|ref|ZP_02391740.1| putative helicase [Bacillus anthracis str. A0442] gi|167638796|ref|ZP_02397071.1| putative helicase [Bacillus anthracis str. A0193] gi|170686032|ref|ZP_02877254.1| putative helicase [Bacillus anthracis str. A0465] gi|170707256|ref|ZP_02897711.1| putative helicase [Bacillus anthracis str. A0389] gi|177650600|ref|ZP_02933567.1| putative helicase [Bacillus anthracis str. A0174] gi|190566481|ref|ZP_03019399.1| putative helicase [Bacillus anthracis Tsiankovskii-I] gi|227815374|ref|YP_002815383.1| putative helicase [Bacillus anthracis str. CDC 684] gi|229599991|ref|YP_002866233.1| putative helicase [Bacillus anthracis str. A0248] gi|254683351|ref|ZP_05147212.1| putative helicase [Bacillus anthracis str. CNEVA-9066] gi|254734706|ref|ZP_05192418.1| putative helicase [Bacillus anthracis str. Western North America USA6153] gi|254741114|ref|ZP_05198802.1| putative helicase [Bacillus anthracis str. Kruger B] gi|254755357|ref|ZP_05207391.1| putative helicase [Bacillus anthracis str. Vollum] gi|254759895|ref|ZP_05211919.1| putative helicase [Bacillus anthracis str. Australia 94] gi|30256079|gb|AAP25714.1| putative helicase [Bacillus anthracis str. Ames] gi|47502240|gb|AAT30916.1| putative helicase [Bacillus anthracis str. 'Ames Ancestor'] gi|49178612|gb|AAT53988.1| helicase, putative [Bacillus anthracis str. Sterne] gi|164714783|gb|EDR20301.1| putative helicase [Bacillus anthracis str. A0488] gi|167513260|gb|EDR88631.1| putative helicase [Bacillus anthracis str. A0193] gi|167531453|gb|EDR94131.1| putative helicase [Bacillus anthracis str. A0442] gi|170127755|gb|EDS96627.1| putative helicase [Bacillus anthracis str. A0389] gi|170669729|gb|EDT20470.1| putative helicase [Bacillus anthracis str. A0465] gi|172083744|gb|EDT68804.1| putative helicase [Bacillus anthracis str. A0174] gi|190562616|gb|EDV16583.1| putative helicase [Bacillus anthracis Tsiankovskii-I] gi|227003172|gb|ACP12915.1| putative helicase [Bacillus anthracis str. CDC 684] gi|229264399|gb|ACQ46036.1| putative helicase [Bacillus anthracis str. A0248] Length = 1064 Score = 135 bits (341), Expect = 3e-30, Method: Composition-based stats. Identities = 43/206 (20%), Positives = 81/206 (39%), Gaps = 25/206 (12%) Query: 6 KFQRELYCDLQGENI--EAFNSASKTVKCLQLANG-AVYYDEEKHWKEVHDEKIKALEVI 62 K + E L + + + + Q+ A++ D+ K K + L I Sbjct: 849 KLREETLKHLDKDTLRKNKIRILAGLTRLRQICCHPALFVDDYK----GSSAKFEQLLDI 904 Query: 63 IEK--ANAAPIIVAYHFNSDLARL-----QKAFPQGRTLDKDPCTIQ-----EWNEGKIP 110 +E+ + I++ F L+ + ++A P P + +NEG+ Sbjct: 905 LEECRSTGKRILIFSQFTKMLSIIGRELNRQAIPYFYLDGNTPSQERVELCNRFNEGEGD 964 Query: 111 LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYL 170 L + G GLNL G + ++ + LWW+ QQ +R + G K V V L Sbjct: 965 LFLISLKAGGTGLNLT-GADTVILYDLWWNPAVEQQAADR-----AYRMGQKNTVQVIKL 1018 Query: 171 IAQNTIDELVLQRLRTKSTIQDLLLN 196 +A TI+E + + +K + ++ Sbjct: 1019 VAHGTIEEKMHELQESKKNLIAEVIE 1044 >gi|94271432|ref|ZP_01291955.1| SNF2-related:Helicase-like [delta proteobacterium MLMS-1] gi|93450447|gb|EAT01631.1| SNF2-related:Helicase-like [delta proteobacterium MLMS-1] Length = 940 Score = 135 bits (341), Expect = 3e-30, Method: Composition-based stats. Identities = 45/208 (21%), Positives = 75/208 (36%), Gaps = 21/208 (10%) Query: 3 QYHKFQRELY--CDLQGENIEAFNSASKTVKCLQLANGA-VYYDEEKHWKEVHDEKIKAL 59 Y +R+ + Q E S +K + + E H+ K + Sbjct: 724 LYEALRRQALRNLEQQDEQRAPLKILSAIMKLRRACCHPRLVLPESDLPCAKHELFSKVV 783 Query: 60 EVIIEKANAAPIIVAYHFNSDLARLQKAFP---------QGRTLDKDPCT-IQEWNEGKI 109 ++E N I+V F L +++ G T ++++ G Sbjct: 784 SELLE--NGHRILVFSQFVDHLTLIRQLLDNQGIGYQYLDGSTPPAVRQRRVEDFQRGGK 841 Query: 110 PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYY 169 L + G GLNL G + ++ WW+ QQ +R + G R V VY Sbjct: 842 DLFLISLRAGGLGLNLT-GADYVIHLDPWWNPAVEQQASDR-----AHRIGQDRPVTVYR 895 Query: 170 LIAQNTIDELVLQRLRTKSTIQDLLLNA 197 LI NTI+E +L + K + LL+ Sbjct: 896 LITSNTIEEKILSLHQRKRNLAGDLLDG 923 >gi|309777116|ref|ZP_07672080.1| SWF/SNF family helicase [Erysipelotrichaceae bacterium 3_1_53] gi|308915125|gb|EFP60901.1| SWF/SNF family helicase [Erysipelotrichaceae bacterium 3_1_53] Length = 1077 Score = 135 bits (341), Expect = 3e-30, Method: Composition-based stats. Identities = 37/201 (18%), Positives = 81/201 (40%), Gaps = 21/201 (10%) Query: 9 RELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKA-- 66 ++L +Q E ++ F + + ++ A E + K+K ++ A Sbjct: 859 QDLQKKMQMEEVDKFQVLAMMTRLREICCDARLLYEN---VTLPSTKLKGCMDLLLSARN 915 Query: 67 NAAPIIVAYHFNSDL---------ARLQKAFPQGRTLDK-DPCTIQEWNEGKIPLLFAHP 116 + +++ F S L ++ G T + ++++ G+ + Sbjct: 916 SGRRVLLFSSFTSMLGLIEEQLRTENIRYLKLTGETKKELRHAYVEQFQNGEADVFLISL 975 Query: 117 ASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTI 176 + G GLNL I++ + WW+L Q +R + G + V VY LI +++I Sbjct: 976 KAGGTGLNLTN-AEIVIHYDPWWNLSAQNQATDR-----AYRIGQTKDVQVYKLIMKDSI 1029 Query: 177 DELVLQRLRTKSTIQDLLLNA 197 +E +++ K + D +N+ Sbjct: 1030 EEKIMKLQERKHILSDTFINS 1050 >gi|228958135|ref|ZP_04119868.1| Helicase, SWF/SNF [Bacillus thuringiensis serovar pakistani str. T13001] gi|228801518|gb|EEM48402.1| Helicase, SWF/SNF [Bacillus thuringiensis serovar pakistani str. T13001] Length = 1064 Score = 135 bits (341), Expect = 3e-30, Method: Composition-based stats. Identities = 43/206 (20%), Positives = 81/206 (39%), Gaps = 25/206 (12%) Query: 6 KFQRELYCDLQGENI--EAFNSASKTVKCLQLANG-AVYYDEEKHWKEVHDEKIKALEVI 62 K + E L + + + + Q+ A++ D+ K K + L I Sbjct: 849 KLREETLKHLDKDTLRKNKIRILAGLTRLRQICCHPALFVDDYK----GSSAKFEQLLEI 904 Query: 63 IEK--ANAAPIIVAYHFNSDLARL-----QKAFPQGRTLDKDPCTIQ-----EWNEGKIP 110 +E+ + I++ F L+ + ++A P P + +NEG+ Sbjct: 905 LEECRSTGKRILIFSQFTKMLSIIGRELNRQAIPYFYLDGSTPAQERVELCNRFNEGEGD 964 Query: 111 LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYL 170 L + G GLNL G + ++ + LWW+ QQ +R + G K V V L Sbjct: 965 LFLISLKAGGTGLNLT-GADTVILYDLWWNPAVEQQAADR-----AYRMGQKNTVQVIKL 1018 Query: 171 IAQNTIDELVLQRLRTKSTIQDLLLN 196 +A TI+E + + +K + ++ Sbjct: 1019 VAHGTIEEKMHELQESKKNLIAEVIE 1044 >gi|309812493|ref|ZP_07706246.1| SNF2 family N-terminal domain protein [Dermacoccus sp. Ellin185] gi|308433548|gb|EFP57427.1| SNF2 family N-terminal domain protein [Dermacoccus sp. Ellin185] Length = 1119 Score = 135 bits (341), Expect = 3e-30, Method: Composition-based stats. Identities = 42/212 (19%), Positives = 81/212 (38%), Gaps = 25/212 (11%) Query: 2 KQYHK-FQRE---LYCDLQGENIEAFNSASKTVKCLQLANGAVYYDE---EKHWKEVHDE 54 + Y + +RE L L+ + + + +LA D+ + + Sbjct: 899 RVYKRHLRREQQRLMGLLKDPDANRVEILAALTRLRRLALDPALVDDEFAGRSVSRKVET 958 Query: 55 KIKALEVIIEKANAAPIIVAYHFNSDLARLQKA---------FPQGRTLDKDPCTIQEWN 105 ++ L I A +V F LA +++A + G T ++ + E+ Sbjct: 959 VVQQLAEI--AAEGHRALVFSQFTDFLAIVREAAADAGVSTTYLDGSTRNRQ-QVVDEFK 1015 Query: 106 EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 G+ F + G GL L ++V WW+ Q I+R + G + V Sbjct: 1016 SGEADAFFISLKAGGTGLTLTEADYVIVL-DPWWNPAAEDQAIDR-----AHRIGQTKHV 1069 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 VY ++ TI+E V++ K + D +++A Sbjct: 1070 MVYRYVSAGTIEEKVMELQEKKRKLFDDVVDA 1101 >gi|283798366|ref|ZP_06347519.1| superfamily II DNA/RNA helicase, SNF2 family [Clostridium sp. M62/1] gi|291073950|gb|EFE11314.1| superfamily II DNA/RNA helicase, SNF2 family [Clostridium sp. M62/1] Length = 1044 Score = 135 bits (341), Expect = 3e-30, Method: Composition-based stats. Identities = 33/208 (15%), Positives = 76/208 (36%), Gaps = 23/208 (11%) Query: 2 KQY--HKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKAL 59 K Y + + + GE + + Q+ E + K++ Sbjct: 825 KLYGANVLRLRQELEAGGELPGKIQILAGLTRLRQICCDPSLCYEN---YKGESAKLETC 881 Query: 60 EVIIEKA--NAAPIIVAYHFNSDLARLQKAFPQGRT----------LDKDPCTIQEWNEG 107 ++ A +++ F S ++K + ++ ++ G Sbjct: 882 LALLSGAVAAGHRVLLFSQFASMFPIIKKRLDRAGIGCFVLTGATSKEERSRLTAKFYAG 941 Query: 108 KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFV 167 +P+ + G GLNL ++++ + WW+ Q +R + G K+ V V Sbjct: 942 DVPVFLISLKAGGTGLNLT-AADVVIHYDPWWNAAAQDQATDR-----AHRIGQKKQVTV 995 Query: 168 YYLIAQNTIDELVLQRLRTKSTIQDLLL 195 + LI + T++E +L +KS + + ++ Sbjct: 996 FRLIMKGTVEESILHLQESKSELAERIV 1023 >gi|228914427|ref|ZP_04078038.1| Helicase, SWF/SNF [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] gi|228845210|gb|EEM90250.1| Helicase, SWF/SNF [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] Length = 1064 Score = 135 bits (341), Expect = 3e-30, Method: Composition-based stats. Identities = 40/205 (19%), Positives = 78/205 (38%), Gaps = 23/205 (11%) Query: 6 KFQRELYCDLQGENI--EAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVII 63 K + E L + + + + Q+ + ++ + K + L I+ Sbjct: 849 KLREETLKHLDKDTLRKNKIRILAGLTRLRQICCHPALFVDD---YQGSSAKFEQLLDIL 905 Query: 64 EK--ANAAPIIVAYHFNSDLARL-----QKAFPQGRTLDKDPCTIQ-----EWNEGKIPL 111 E+ + I++ F L+ + ++A P P + +NEG+ L Sbjct: 906 EECRSTGKRILIFSQFTKMLSIIGRELNRQAIPYFYLDGNTPSQERVELCNRFNEGEGDL 965 Query: 112 LFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLI 171 + G GLNL G + ++ + LWW+ QQ +R + G K V V L+ Sbjct: 966 FLISLKAGGTGLNLT-GADTVILYDLWWNPAVEQQAADR-----AYRMGQKNTVQVIKLV 1019 Query: 172 AQNTIDELVLQRLRTKSTIQDLLLN 196 A TI+E + + K + ++ Sbjct: 1020 AHGTIEEKMHELQEGKKNLIAEVIE 1044 >gi|227893708|ref|ZP_04011513.1| Snf2 family helicase [Lactobacillus ultunensis DSM 16047] gi|227864568|gb|EEJ71989.1| Snf2 family helicase [Lactobacillus ultunensis DSM 16047] Length = 1180 Score = 135 bits (341), Expect = 3e-30, Method: Composition-based stats. Identities = 43/211 (20%), Positives = 86/211 (40%), Gaps = 27/211 (12%) Query: 3 QYHKFQRELYCDLQGENIEAFNSA-----SKTVKCLQLANGAVYYDEEKHWKEVHDEKIK 57 Y ++L L G+ F + ++ +K ++ E H K K+ Sbjct: 959 LYQLQTQKLIAQLNGQEETDFKKSRFEIFAQIIKLREICCDPRLLYENYHGK---SNKLI 1015 Query: 58 ALEVIIEKA--NAAPIIVAYHFNSDLARLQKAFPQGRT----------LDKDPCTIQEWN 105 +I+ N I++ F S L LQ + + +K I+E+N Sbjct: 1016 TTVDLIKTNLENGHKILLFSQFTSMLEILQSKLKKAKIPLFMLTGSTPKEKRQEYIREFN 1075 Query: 106 EGKIP-LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA 164 + P + + G G+NL ++++ + WW+L Q +R + G K + Sbjct: 1076 TMEQPGVFLISLKAGGTGINLT-SADVVIHYDPWWNLAAENQATDR-----AHRIGQKHS 1129 Query: 165 VFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 V VY ++ +NTI+E +++ + K+ + +L Sbjct: 1130 VKVYKMVTKNTIEERIIKLQQKKAELAQAIL 1160 >gi|296502447|ref|YP_003664147.1| SWF/SNF family helicase [Bacillus thuringiensis BMB171] gi|296323499|gb|ADH06427.1| SWF/SNF family helicase [Bacillus thuringiensis BMB171] Length = 1064 Score = 135 bits (341), Expect = 3e-30, Method: Composition-based stats. Identities = 42/206 (20%), Positives = 80/206 (38%), Gaps = 25/206 (12%) Query: 6 KFQRELYCDLQGENI--EAFNSASKTVKCLQLANG-AVYYDEEKHWKEVHDEKIKALEVI 62 K + E L + + + + Q+ A++ D+ K K + L I Sbjct: 849 KLREETLKHLDKDTLRKNKIRILAGLTRLRQICCHPALFVDDYK----GSSAKFEQLLEI 904 Query: 63 IEK--ANAAPIIVAYHFNSDL---------ARLQKAFPQGRTLDKDPCTI-QEWNEGKIP 110 +E+ + I++ F L + + G T ++ + +NEG+ Sbjct: 905 LEECRSTGKRILIFSQFTKMLSIIGRELNRQAIPYFYLDGSTPAQERVELCDRFNEGEGD 964 Query: 111 LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYL 170 L + G GLNL G + ++ + LWW+ QQ +R + G K V V L Sbjct: 965 LFLISLKAGGTGLNLT-GADTVILYDLWWNPAVEQQAADR-----AYRMGQKNTVQVIKL 1018 Query: 171 IAQNTIDELVLQRLRTKSTIQDLLLN 196 +A TI+E + + +K + ++ Sbjct: 1019 VAHGTIEEKMHELQESKKNLIAEVIE 1044 >gi|228952232|ref|ZP_04114322.1| Helicase, SWF/SNF [Bacillus thuringiensis serovar kurstaki str. T03a001] gi|228807447|gb|EEM53976.1| Helicase, SWF/SNF [Bacillus thuringiensis serovar kurstaki str. T03a001] Length = 1064 Score = 135 bits (341), Expect = 3e-30, Method: Composition-based stats. Identities = 42/206 (20%), Positives = 80/206 (38%), Gaps = 25/206 (12%) Query: 6 KFQRELYCDLQGENI--EAFNSASKTVKCLQLANG-AVYYDEEKHWKEVHDEKIKALEVI 62 K + E L + + + + Q+ A++ D+ K K + L I Sbjct: 849 KLREETLKHLDKDTLRKNKIRILAGLTRLRQICCHPALFVDDYK----GSSAKFEQLLEI 904 Query: 63 IEK--ANAAPIIVAYHFNSDL---------ARLQKAFPQGRTLDKDPCTI-QEWNEGKIP 110 +E+ + I++ F L + + G T ++ + +NEG+ Sbjct: 905 LEECRSTGKRILIFSQFTKMLSIIGRELNHQAIPYFYLDGSTPAQERVELCDRFNEGEGD 964 Query: 111 LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYL 170 L + G GLNL G + ++ + LWW+ QQ +R + G K V V L Sbjct: 965 LFLISLKAGGTGLNLT-GADTVILYDLWWNPAVEQQAADR-----AYRMGQKNTVQVIKL 1018 Query: 171 IAQNTIDELVLQRLRTKSTIQDLLLN 196 +A TI+E + + +K + ++ Sbjct: 1019 VAHGTIEEKMHELQESKKNLIAEVIE 1044 >gi|229079035|ref|ZP_04211586.1| Helicase, SWF/SNF [Bacillus cereus Rock4-2] gi|228704209|gb|EEL56644.1| Helicase, SWF/SNF [Bacillus cereus Rock4-2] Length = 1064 Score = 135 bits (341), Expect = 3e-30, Method: Composition-based stats. Identities = 42/206 (20%), Positives = 80/206 (38%), Gaps = 25/206 (12%) Query: 6 KFQRELYCDLQGENI--EAFNSASKTVKCLQLANG-AVYYDEEKHWKEVHDEKIKALEVI 62 K + E L + + + + Q+ A++ D+ K K + L I Sbjct: 849 KLREETLKHLDKDTLRKNKIRILAGLTRLRQICCHPALFVDDYK----GSSAKFEQLLEI 904 Query: 63 IEK--ANAAPIIVAYHFNSDL---------ARLQKAFPQGRTLDKDPCTI-QEWNEGKIP 110 +E+ + I++ F L + + G T ++ + +NEG+ Sbjct: 905 LEECRSTGKRILIFSQFTKMLSIIGRELNHQAIPYFYLDGSTPAQERVELCDRFNEGEGD 964 Query: 111 LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYL 170 L + G GLNL G + ++ + LWW+ QQ +R + G K V V L Sbjct: 965 LFLISLKAGGTGLNLT-GADTVILYDLWWNPAVEQQAADR-----AYRMGQKNTVQVIKL 1018 Query: 171 IAQNTIDELVLQRLRTKSTIQDLLLN 196 +A TI+E + + +K + ++ Sbjct: 1019 VAHGTIEEKMHELQESKKNLIAEVIE 1044 >gi|229819960|ref|YP_002881486.1| Non-specific serine/threonine protein kinase [Beutenbergia cavernae DSM 12333] gi|229565873|gb|ACQ79724.1| Non-specific serine/threonine protein kinase [Beutenbergia cavernae DSM 12333] Length = 1118 Score = 135 bits (341), Expect = 3e-30, Method: Composition-based stats. Identities = 43/208 (20%), Positives = 76/208 (36%), Gaps = 23/208 (11%) Query: 2 KQYHK---FQRELYCDLQGE-NIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIK 57 + Y + +R+ L + + S + QLA D + K+ Sbjct: 881 RVYDRHLHRERQRVLRLADDLDRNRVEVLSALTRLRQLAIDPTLVDAD---SAAPGSKLD 937 Query: 58 ALEVIIEKA--NAAPIIVAYHFNSDLARLQKAFPQGR--------TLDKDPCTIQEWNEG 107 AL ++ +A ++V F LA + T + I+ + EG Sbjct: 938 ALLPLLTEAAAEGHRVLVFSQFTRYLAMIGARLDAAGLAYSYLDGTTRRRDAVIRGFAEG 997 Query: 108 KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFV 167 P+ + G GLNL + V WW+ +Q ++R + G + V V Sbjct: 998 TDPVFLISLKAGGVGLNL-AMADYAVLADPWWNPATEEQAVDR-----AHRIGQTKPVMV 1051 Query: 168 YYLIAQNTIDELVLQRLRTKSTIQDLLL 195 Y L+A +TI+E V+ K + +L Sbjct: 1052 YRLVATDTIEEKVMALQGAKRALVAGVL 1079 >gi|77460089|ref|YP_349596.1| SNF2-like [Pseudomonas fluorescens Pf0-1] gi|77384092|gb|ABA75605.1| putative helicase [Pseudomonas fluorescens Pf0-1] Length = 896 Score = 135 bits (341), Expect = 3e-30, Method: Composition-based stats. Identities = 38/184 (20%), Positives = 78/184 (42%), Gaps = 19/184 (10%) Query: 29 TVKCLQLANGAVYYDEEK-HWKEVHDEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQ 85 +K Q+ ++ + K+ +L ++E+ I++ F S L+ ++ Sbjct: 696 LLKLRQVCCDLRLVNDATLPARGSTSGKLDSLMEMLEELFEEGRRILLFSQFTSMLSLIE 755 Query: 86 KAFPQ---------GRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFS 136 + G+T D+ ++E+ GK + + G GLNL + ++ + Sbjct: 756 DELKKRNVAYALLTGQTRDRR-TPVKEFQSGKRQIFLISLKAGGVGLNLTE-ADTVIHYD 813 Query: 137 LWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 WW+ Q +R + G ++ VFVY +IA+ T++E + R KS + +L+ Sbjct: 814 PWWNPATENQATDR-----AYRIGQEKPVFVYKMIARGTVEEKIQLLQREKSDLAAGVLD 868 Query: 197 ALKK 200 K Sbjct: 869 GRKA 872 >gi|257126260|ref|YP_003164374.1| non-specific serine/threonine protein kinase [Leptotrichia buccalis C-1013-b] gi|257050199|gb|ACV39383.1| Non-specific serine/threonine protein kinase [Leptotrichia buccalis C-1013-b] Length = 1172 Score = 135 bits (341), Expect = 3e-30, Method: Composition-based stats. Identities = 39/212 (18%), Positives = 83/212 (39%), Gaps = 21/212 (9%) Query: 4 YHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVII 63 Y K + + K Q+ N + E+ + K++ L ++ Sbjct: 956 YIKKAKSEMKKFNENENNRMKILAILTKLRQICNSPTLFKEDYKGEV---AKLEVLRDLL 1012 Query: 64 EK--ANAAPIIVAYHFNSDLARLQKA---------FPQGRTLDKDPCTI-QEWNEGKIPL 111 N +++ F L ++K + G K+ I ++N G+ + Sbjct: 1013 PDITENGHRLLIFSQFVGTLKEIEKELVNMGIEYFYIDGSVKSKERVDICNKFNAGERQV 1072 Query: 112 LFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLI 171 + + G GLNL G ++++ + WW++ Q +R + G K++V V L+ Sbjct: 1073 VLISLKAGGTGLNL-VGADVVIHYDPWWNIAVENQASDR-----AYRIGQKKSVQVIKLV 1126 Query: 172 AQNTIDELVLQRLRTKSTIQDLLLNALKKETI 203 + TI+E +++ K + + LL + E + Sbjct: 1127 TEGTIEEKIIKIQENKRQLSENLLESKDGEKV 1158 >gi|295100101|emb|CBK89190.1| Superfamily II DNA/RNA helicases, SNF2 family [Eubacterium cylindroides T2-87] Length = 473 Score = 135 bits (340), Expect = 3e-30, Method: Composition-based stats. Identities = 37/201 (18%), Positives = 74/201 (36%), Gaps = 21/201 (10%) Query: 9 RELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKA-- 66 +E+ ++ + + + K Q+ A + + KI A +I+ Sbjct: 263 KEMQAKMKEVHFDRIAILAMLTKLRQICCDARLVYDN---IKEPSTKINATISLIKTLTE 319 Query: 67 NAAPIIVAYHFNS---------DLARLQKAFPQGRT-LDKDPCTIQEWNEGKIPLLFAHP 116 N I++ F S D ++ G T ++ + +NE + Sbjct: 320 NNKKILLFSAFTSLLDLVSNQLDKEQISYYMLTGSTNKEERRKLVNNFNEDDTRVFLISL 379 Query: 117 ASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTI 176 + G GLNL ++ WW+L Q +R + G V VY +I +++I Sbjct: 380 KAGGTGLNLT-SAEAVIHIDPWWNLSAQNQATDR-----AHRIGQNANVQVYRMIMKDSI 433 Query: 177 DELVLQRLRTKSTIQDLLLNA 197 +E +L+ K+ + D + Sbjct: 434 EEKILKMQERKANLADSFVEG 454 >gi|229074784|ref|ZP_04207799.1| Helicase, SWF/SNF [Bacillus cereus Rock4-18] gi|228708296|gb|EEL60454.1| Helicase, SWF/SNF [Bacillus cereus Rock4-18] Length = 1068 Score = 135 bits (340), Expect = 3e-30, Method: Composition-based stats. Identities = 45/206 (21%), Positives = 82/206 (39%), Gaps = 25/206 (12%) Query: 6 KFQRELYCDLQGENI--EAFNSASKTVKCLQLANG-AVYYDEEKHWKEVHDEKIKALEVI 62 K + E L + + + + Q+ N A++ D+ K K + L I Sbjct: 853 KLREETLKHLDKDTLRKNKIRILAGLTRLRQICNHPALFVDDYK----GSSAKFEQLLEI 908 Query: 63 IEK--ANAAPIIVAYHFNSDLARL-----QKAFPQGRTLDKDPCTIQ-----EWNEGKIP 110 +E+ + I++ F L+ + ++A P P + +NEG+ Sbjct: 909 LEECRSTGKRILIFSQFTKMLSIIGRELNRQAIPYFYLDGSTPAQERVELCNRFNEGEGD 968 Query: 111 LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYL 170 L + G GLNL G + ++ + LWW+ QQ +R + G K V V L Sbjct: 969 LFLISLKAGGTGLNLT-GADTVILYDLWWNPAVEQQAADR-----AYRMGQKNTVQVIKL 1022 Query: 171 IAQNTIDELVLQRLRTKSTIQDLLLN 196 +A TI+E + + TK + ++ Sbjct: 1023 VAHGTIEEKMHELQETKKNLIAEVIE 1048 >gi|313898129|ref|ZP_07831668.1| SNF2 family N-terminal domain protein [Clostridium sp. HGF2] gi|312957157|gb|EFR38786.1| SNF2 family N-terminal domain protein [Clostridium sp. HGF2] Length = 527 Score = 135 bits (340), Expect = 3e-30, Method: Composition-based stats. Identities = 35/199 (17%), Positives = 80/199 (40%), Gaps = 21/199 (10%) Query: 9 RELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVII--EKA 66 ++L +Q E ++ F + + ++ A E + K++ ++ + Sbjct: 302 QDLQKRMQMEEVDKFQVLAMMTRLREICCDARLLYEN---VTLPSTKLRGCMDLLLNARN 358 Query: 67 NAAPIIVAYHFNSDLARLQKAF---------PQGRTLDK-DPCTIQEWNEGKIPLLFAHP 116 + +++ F S L +++ G T + ++++ G+ + Sbjct: 359 SGRRVLLFSSFTSMLELIEEQLRVENIRYLKLTGETKKELRHAYVEKFQNGEADVFLISL 418 Query: 117 ASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTI 176 + G GLNL I++ + WW+L Q +R + G + V VY LI ++TI Sbjct: 419 KAGGTGLNLTN-AEIVIHYDPWWNLSAQNQATDR-----AYRIGQTKDVQVYKLIMKDTI 472 Query: 177 DELVLQRLRTKSTIQDLLL 195 +E +++ K + D + Sbjct: 473 EEKIMKLQERKHILSDTFI 491 >gi|229102446|ref|ZP_04233153.1| Helicase, SWF/SNF [Bacillus cereus Rock3-28] gi|228680931|gb|EEL35101.1| Helicase, SWF/SNF [Bacillus cereus Rock3-28] Length = 1068 Score = 135 bits (340), Expect = 3e-30, Method: Composition-based stats. Identities = 45/206 (21%), Positives = 82/206 (39%), Gaps = 25/206 (12%) Query: 6 KFQRELYCDLQGENI--EAFNSASKTVKCLQLANG-AVYYDEEKHWKEVHDEKIKALEVI 62 K + E L + + + + Q+ N A++ D+ K K + L I Sbjct: 853 KLREETLKHLDKDTLRKNKIRILAGLTRLRQICNHPALFVDDYK----GSSAKFEQLLEI 908 Query: 63 IEK--ANAAPIIVAYHFNSDLARL-----QKAFPQGRTLDKDPCTIQ-----EWNEGKIP 110 +E+ + I++ F L+ + ++A P P + +NEG+ Sbjct: 909 LEECRSTGKRILIFSQFTKMLSIIGRELNRQAIPYFYLDGSTPAQERVELCNRFNEGEGD 968 Query: 111 LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYL 170 L + G GLNL G + ++ + LWW+ QQ +R + G K V V L Sbjct: 969 LFLISLKAGGTGLNLT-GADTVILYDLWWNPAVEQQAADR-----AYRMGQKNTVQVIKL 1022 Query: 171 IAQNTIDELVLQRLRTKSTIQDLLLN 196 +A TI+E + + TK + ++ Sbjct: 1023 VAHGTIEEKMHELQETKKNLIAEVIE 1048 >gi|229115289|ref|ZP_04244698.1| Helicase, SWF/SNF [Bacillus cereus Rock1-3] gi|228668121|gb|EEL23554.1| Helicase, SWF/SNF [Bacillus cereus Rock1-3] Length = 1068 Score = 135 bits (340), Expect = 3e-30, Method: Composition-based stats. Identities = 45/206 (21%), Positives = 82/206 (39%), Gaps = 25/206 (12%) Query: 6 KFQRELYCDLQGENI--EAFNSASKTVKCLQLANG-AVYYDEEKHWKEVHDEKIKALEVI 62 K + E L + + + + Q+ N A++ D+ K K + L I Sbjct: 853 KLREETLKHLDKDTLRKNKIRILAGLTRLRQICNHPALFVDDYK----GSSAKFEQLLEI 908 Query: 63 IEK--ANAAPIIVAYHFNSDLARL-----QKAFPQGRTLDKDPCTIQ-----EWNEGKIP 110 +E+ + I++ F L+ + ++A P P + +NEG+ Sbjct: 909 LEECRSTGKRILIFSQFTKMLSIIGRELNRQAIPYFYLDGSTPAQERVELCNRFNEGEGD 968 Query: 111 LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYL 170 L + G GLNL G + ++ + LWW+ QQ +R + G K V V L Sbjct: 969 LFLISLKAGGTGLNLT-GADTVILYDLWWNPAVEQQAADR-----AYRMGQKNTVQVIKL 1022 Query: 171 IAQNTIDELVLQRLRTKSTIQDLLLN 196 +A TI+E + + TK + ++ Sbjct: 1023 VAHGTIEEKMHELQETKKNLIAEVIE 1048 >gi|302335213|ref|YP_003800420.1| SNF2-related protein [Olsenella uli DSM 7084] gi|301319053|gb|ADK67540.1| SNF2-related protein [Olsenella uli DSM 7084] Length = 1079 Score = 135 bits (340), Expect = 3e-30, Method: Composition-based stats. Identities = 44/229 (19%), Positives = 88/229 (38%), Gaps = 38/229 (16%) Query: 2 KQYHKFQRELYCDLQGENIEAFN-----SASKTVKCLQLANGA--VYYDEEKHWKEVHDE 54 + Y ++ L L + EAF ++ ++ QL +Y D E Sbjct: 856 RLYQAHEQALRVSLSRQTDEAFGRGKIQVLAELMRLRQLCCDPRLLYDDYEGG-----SA 910 Query: 55 KIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFP----------QGRTLDKDPCTIQ 102 K+ + ++ ++ +++ F S L+ + + Sbjct: 911 KLATVMDLVGSVVDSSHKMLLFSQFTSYLSLIASELDARGVRYYTITGATPKHRRLELAD 970 Query: 103 EWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFK 162 +N + P+ + G GLNL G +++V WW+ Q +R + G Sbjct: 971 AFNADETPVFLISLKAGGTGLNL-VGASVVVHADPWWNAAAQDQATDR-----AHRIGQT 1024 Query: 163 RAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL--------NALKKETI 203 R V VY +IA++TI++ +L KS + + ++ +AL+KE + Sbjct: 1025 RDVSVYKVIAKDTIEDRILALQEVKSDLAEQVIGVGGGAGLSALRKEDL 1073 >gi|229096334|ref|ZP_04227307.1| Helicase, SWF/SNF [Bacillus cereus Rock3-29] gi|228687294|gb|EEL41199.1| Helicase, SWF/SNF [Bacillus cereus Rock3-29] Length = 1068 Score = 135 bits (340), Expect = 3e-30, Method: Composition-based stats. Identities = 45/206 (21%), Positives = 82/206 (39%), Gaps = 25/206 (12%) Query: 6 KFQRELYCDLQGENI--EAFNSASKTVKCLQLANG-AVYYDEEKHWKEVHDEKIKALEVI 62 K + E L + + + + Q+ N A++ D+ K K + L I Sbjct: 853 KLREETLKHLDKDTLRKNKIRILAGLTRLRQICNHPALFVDDYK----GSSAKFEQLLEI 908 Query: 63 IEK--ANAAPIIVAYHFNSDLARL-----QKAFPQGRTLDKDPCTIQ-----EWNEGKIP 110 +E+ + I++ F L+ + ++A P P + +NEG+ Sbjct: 909 LEECRSTGKRILIFSQFTKMLSIIGRELNRQAIPYFYLDGSTPAQERVELCNRFNEGEGD 968 Query: 111 LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYL 170 L + G GLNL G + ++ + LWW+ QQ +R + G K V V L Sbjct: 969 LFLISLKAGGTGLNLT-GADTVILYDLWWNPAVEQQAADR-----AYRMGQKNTVQVIKL 1022 Query: 171 IAQNTIDELVLQRLRTKSTIQDLLLN 196 +A TI+E + + TK + ++ Sbjct: 1023 VAHGTIEEKMHELQETKKNLIAEVIE 1048 >gi|209696433|ref|YP_002264364.1| putative helicase [Aliivibrio salmonicida LFI1238] gi|208010387|emb|CAQ80731.1| putative helicase [Aliivibrio salmonicida LFI1238] Length = 1284 Score = 135 bits (340), Expect = 3e-30, Method: Composition-based stats. Identities = 38/208 (18%), Positives = 78/208 (37%), Gaps = 21/208 (10%) Query: 3 QYHKFQRELYCDLQGENIEAF-NSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEV 61 Y ++E +L+ + + K Q+ + + K+ + Sbjct: 1067 AYEAVRKESLANLKSASSRGVVEVFAALTKLRQICCDVSLVFDS--MQGEASTKLSEAQS 1124 Query: 62 IIEKA--NAAPIIVAYHFNSDLAR---------LQKAFPQGRTLDKDPCT-IQEWNEGKI 109 +IE+A ++V F L R + ++ G+ K I + +G Sbjct: 1125 LIEEALDGDHKVLVFSQFVGVLKRFSAQLTESNISFSYLDGKLSTKQRQAAIDSFKDGTN 1184 Query: 110 PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYY 169 + + G GLNL + ++ WW+ Q +R + G ++ V VY Sbjct: 1185 SVFLISLKAGGTGLNLTE-ADTVIHIDPWWNPAVEDQASDR-----AYRMGQQKPVTVYR 1238 Query: 170 LIAQNTIDELVLQRLRTKSTIQDLLLNA 197 L+ ++TI+E ++ K + D +L+A Sbjct: 1239 LVTKDTIEEKIIALHHDKRDLADQVLSA 1266 >gi|317491226|ref|ZP_07949662.1| SNF2 family domain-containing protein [Enterobacteriaceae bacterium 9_2_54FAA] gi|316920773|gb|EFV42096.1| SNF2 family domain-containing protein [Enterobacteriaceae bacterium 9_2_54FAA] Length = 1085 Score = 135 bits (340), Expect = 4e-30, Method: Composition-based stats. Identities = 38/179 (21%), Positives = 72/179 (40%), Gaps = 18/179 (10%) Query: 29 TVKCLQLANGAVYYDEEKH--WKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQK 86 +K Q+ + EK KE ++ + I++ F L + + Sbjct: 892 LLKLRQVCCDPRLVNLEKAALVKESAKLELLLELLPEMIEEGRRILLFSQFTGMLDLISQ 951 Query: 87 AFPQ---------GRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSL 137 A + G T D+ +Q + G++PL + G GLNL + ++ + Sbjct: 952 ALDKAGIAYVTLTGSTADRH-APVQRFQRGEVPLFLISLKAGGVGLNLT-AADTVIHYDP 1009 Query: 138 WWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 WW+ Q +R + G + VFVY LIA +I+E ++ K+ + + +L+ Sbjct: 1010 WWNPAAENQATDR-----AHRMGQDKPVFVYKLIAAGSIEEKIVALQDKKAALANSILS 1063 >gi|326329299|ref|ZP_08195624.1| SNF2/helicase domain protein [Nocardioidaceae bacterium Broad-1] gi|325952874|gb|EGD44889.1| SNF2/helicase domain protein [Nocardioidaceae bacterium Broad-1] Length = 907 Score = 135 bits (340), Expect = 4e-30, Method: Composition-based stats. Identities = 42/215 (19%), Positives = 84/215 (39%), Gaps = 23/215 (10%) Query: 3 QYHKFQRELYCDLQGENIEAFN----SASKTVKCLQLANG-AVYYDEEKHWKEVHDEKIK 57 Y F R ++ + + S Q+ N A + +E +KI+ Sbjct: 670 LYEAFVRNAMERIERLDADDPQRRGLVLSLLTGLKQICNHPAQFLKQEAGRITGRSQKIE 729 Query: 58 ALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFP----------QGRTLDKDPCTIQEWN 105 L+ ++ A + ++V + + L+ + G + + ++ + Sbjct: 730 LLDELVSTVLAESGAVLVFTQYVAMARLLEAHWAASGVAHQFLHGGTPVAERSRMVERFQ 789 Query: 106 EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 EG++P+ + G GLNL + ++ WW+ Q +R + G R V Sbjct: 790 EGEVPVFLLSLKAGGVGLNLTR-ADHVIHVDRWWNPAVEDQATDR-----AHRIGQTRTV 843 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKK 200 V+ LI Q T++E V + L+ K + D +L A + Sbjct: 844 QVHRLITQGTVEERVAELLQRKRVLADAVLGAGEA 878 >gi|119512991|ref|ZP_01632051.1| SWI/SNF family helicase [Nodularia spumigena CCY9414] gi|119462365|gb|EAW43342.1| SWI/SNF family helicase [Nodularia spumigena CCY9414] Length = 1404 Score = 135 bits (340), Expect = 4e-30, Method: Composition-based stats. Identities = 36/213 (16%), Positives = 75/213 (35%), Gaps = 25/213 (11%) Query: 1 MKQYHKFQRELYCDLQGENIEA----FNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKI 56 M Y +R+ L + EA ++ +K + + E+ K+ Sbjct: 1182 MAFYEALRRQAISKLTESDAEAGKKHLQVLAEIMKLRRACCNPSLVMPD---TELPSSKL 1238 Query: 57 KALEVIIEKA--NAAPIIVAYHFNSDLARLQKAFPQ----------GRTLDKDPCTIQEW 104 + ++ + N +V F L ++ Q + + + + Sbjct: 1239 QLFGEVLGELLENRHKALVFSQFVDHLHIIRDYLEQQGINYQYLDGSTPVAERKKRVDAF 1298 Query: 105 NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA 164 G + + G GLNL + ++ WW+ Q +R + G +R Sbjct: 1299 QAGTGDVFLISLKAGGTGLNLT-AADYVIHTDPWWNPAVEDQASDR-----AHRIGQQRP 1352 Query: 165 VFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 V +Y L+A++TI++ ++ K + D LL Sbjct: 1353 VTIYRLVAKDTIEDKIVALHHHKRDLADTLLEG 1385 >gi|226360588|ref|YP_002778366.1| helicase [Rhodococcus opacus B4] gi|226239073|dbj|BAH49421.1| putative helicase [Rhodococcus opacus B4] Length = 934 Score = 135 bits (340), Expect = 4e-30, Method: Composition-based stats. Identities = 44/209 (21%), Positives = 77/209 (36%), Gaps = 21/209 (10%) Query: 3 QYHKFQRELYCDLQGENIEAFNSA--SKTVKCLQLANG-AVYYDEEKHWKEVHDEKIKAL 59 Y RE + + S Q+ N A Y +E +KI L Sbjct: 702 LYEALVREAMERIATSEGIGRRGSIVSLLTGLKQICNHPAQYLGQEHAALTGRSQKIGLL 761 Query: 60 EVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQ----------GRTLDKDPCTIQEWNEG 107 + +I+ A +V HF + L++ G ++ ++ + G Sbjct: 762 DELIDTNLAEGGRSLVFTHFATMGRLLRRHLTTRGVTCEFLHGGTSVAAREELVERFQSG 821 Query: 108 KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFV 167 +P+L + G GLNL + +V F WW+ Q +R + G V V Sbjct: 822 DVPVLILSLKAAGTGLNLTR-ADHVVHFDRWWNPAVEDQATDR-----AYRIGQTHPVVV 875 Query: 168 YYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + L+ TI+E + L +K + D +L+ Sbjct: 876 HRLVTAGTIEEHIAAMLASKRQLADSVLS 904 >gi|229160810|ref|ZP_04288801.1| Helicase, SWF/SNF [Bacillus cereus R309803] gi|228622658|gb|EEK79493.1| Helicase, SWF/SNF [Bacillus cereus R309803] Length = 1068 Score = 135 bits (340), Expect = 4e-30, Method: Composition-based stats. Identities = 43/206 (20%), Positives = 81/206 (39%), Gaps = 25/206 (12%) Query: 6 KFQRELYCDLQGENI--EAFNSASKTVKCLQLANG-AVYYDEEKHWKEVHDEKIKALEVI 62 K + E L + + + + Q+ N A++ D+ K K + L I Sbjct: 853 KLREETLKHLDKDTLRKNKIRILAGLTRLRQICNHPALFVDDYK----GSSAKFEQLLEI 908 Query: 63 IEK--ANAAPIIVAYHFNSDL---------ARLQKAFPQGRTLDKDPCTI-QEWNEGKIP 110 +E+ + I++ F L + + G T ++ + +NEG+ Sbjct: 909 LEECRSTGKRILIFSQFTKMLSIIGRELNRQAIPYFYLDGSTPAQERVELCDRFNEGEGD 968 Query: 111 LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYL 170 L + G GLNL G + ++ + LWW+ QQ +R + G K V V L Sbjct: 969 LFLISLKAGGTGLNLT-GADTVILYDLWWNPAVEQQAADR-----AYRMGQKNTVQVIKL 1022 Query: 171 IAQNTIDELVLQRLRTKSTIQDLLLN 196 +A TI+E + + +K + ++ Sbjct: 1023 VAHGTIEEKMHELQESKKNLIAEVIE 1048 >gi|319652149|ref|ZP_08006268.1| helicase [Bacillus sp. 2_A_57_CT2] gi|317396138|gb|EFV76857.1| helicase [Bacillus sp. 2_A_57_CT2] Length = 1072 Score = 135 bits (340), Expect = 4e-30, Method: Composition-based stats. Identities = 37/214 (17%), Positives = 84/214 (39%), Gaps = 27/214 (12%) Query: 2 KQYH----KFQRELYCDLQGENI--EAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEK 55 K Y K + + L + + + + Q+ + + + K Sbjct: 849 KLYAAYLAKLREDTLKHLNKDTLRKNRIRILAGLTRLRQICCHPALFVDG---YKGSSAK 905 Query: 56 IKALEVIIEKA--NAAPIIVAYHFNSDLARLQKA---------FPQGRTLDKDPCTI-QE 103 + L+ IIE++ + +++ F L + + + G+ + I + Sbjct: 906 FEQLKRIIEESRLSGRRVLIFSQFTKMLDLIGRELALLDLPFFYLDGQIPSAERVEICRR 965 Query: 104 WNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKR 163 +NEG+ + G GLNL G + ++ + LWW+ +Q +R + G K Sbjct: 966 FNEGERDFFLISLKAGGTGLNLT-GADTVILYDLWWNPAVEEQAADR-----AHRIGQKN 1019 Query: 164 AVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 V V L+++ TI+E + + K + + ++++ Sbjct: 1020 TVQVIKLLSRGTIEEKMNELQDKKKNLIEEIIDS 1053 >gi|257869721|ref|ZP_05649374.1| Snf2 family protein [Enterococcus gallinarum EG2] gi|257803885|gb|EEV32707.1| Snf2 family protein [Enterococcus gallinarum EG2] Length = 1074 Score = 135 bits (340), Expect = 4e-30, Method: Composition-based stats. Identities = 39/217 (17%), Positives = 89/217 (41%), Gaps = 26/217 (11%) Query: 2 KQYHKFQRELYCDLQGENIEAF-----NSASKTVKCLQLANGAVYYDEEKHWKEVHDEKI 56 K Y + R++ ++ + AF + + + Q+ + E+ E K+ Sbjct: 849 KIYLAYLRQMREEIAQMDTAAFRKNRISILAGLTRLRQICCDPRLFVED---YEGTSGKL 905 Query: 57 KALEVIIEKA--NAAPIIVAYHFNSDLARLQKAFPQ----------GRTLDKDPCTIQEW 104 + ++ +I+ A N +++ F S L+ +++ Q + + + Sbjct: 906 EQVKDLIQAAKENGRRVLLFSQFTSMLSIIEEELAQEGIETFYLRGSTPPQERLSMVDAF 965 Query: 105 NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA 164 N G+ + + G GLNL G + ++ + LWW+ +Q R + G K+ Sbjct: 966 NNGEKDVFLISLKAGGTGLNLT-GADTVILYDLWWNPAVEEQAAGR-----AHRIGQKKV 1019 Query: 165 VFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 V V+ +IA+ TI+E + + K + ++ + + Sbjct: 1020 VEVWRMIAEGTIEERMDALQQEKRELFQKVIQGNEAQ 1056 >gi|154508745|ref|ZP_02044387.1| hypothetical protein ACTODO_01253 [Actinomyces odontolyticus ATCC 17982] gi|153798379|gb|EDN80799.1| hypothetical protein ACTODO_01253 [Actinomyces odontolyticus ATCC 17982] Length = 1043 Score = 135 bits (340), Expect = 4e-30, Method: Composition-based stats. Identities = 42/207 (20%), Positives = 78/207 (37%), Gaps = 21/207 (10%) Query: 3 QYHKFQRELYCDL-QGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEV 61 QY +R DL + + + + + QLA +E + V KI+ L Sbjct: 829 QYLARERARILDLLRDVDANRMSVLAAITRLRQLALDPALVEES--YAHVGSAKIEYLAD 886 Query: 62 IIEKAN--AAPIIVAYHFNSDLARLQKAFP---------QGRTLDKDPCTIQEWNEGKIP 110 +++ +V F S L R++ G T + I+++ G Sbjct: 887 RLDEIVPLGHQALVFSQFTSFLERIRHMLERRGISAVQLDGSTRGRAE-VIEKFRSGDAQ 945 Query: 111 LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYL 170 + + G GL L + V WW+ +Q I+R + G + V VY + Sbjct: 946 VFLISLKAGGSGLTLTEADYVYVM-DPWWNPAAEEQAIDR-----AHRIGQMKKVNVYRM 999 Query: 171 IAQNTIDELVLQRLRTKSTIQDLLLNA 197 +A +TI+ V++ K + ++N Sbjct: 1000 VATDTIEAKVVELQDRKRQLISSVMNG 1026 >gi|293192909|ref|ZP_06609753.1| putative helicase [Actinomyces odontolyticus F0309] gi|292819965|gb|EFF78964.1| putative helicase [Actinomyces odontolyticus F0309] Length = 1043 Score = 135 bits (340), Expect = 4e-30, Method: Composition-based stats. Identities = 42/207 (20%), Positives = 78/207 (37%), Gaps = 21/207 (10%) Query: 3 QYHKFQRELYCDL-QGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEV 61 QY +R DL + + + + + QLA +E + V KI+ L Sbjct: 829 QYLARERARILDLLRDVDANRMSVLAAITRLRQLALDPALVEES--YAHVGSAKIEYLAD 886 Query: 62 IIEKAN--AAPIIVAYHFNSDLARLQKAFP---------QGRTLDKDPCTIQEWNEGKIP 110 +++ +V F S L R++ G T + I+++ G Sbjct: 887 RLDEIVPLGHQALVFSQFTSFLERIRHMLERRGISAVQLDGSTRGRAE-VIEKFRSGDAQ 945 Query: 111 LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYL 170 + + G GL L + V WW+ +Q I+R + G + V VY + Sbjct: 946 VFLISLKAGGSGLTLTEADYVYVM-DPWWNPAAEEQAIDR-----AHRIGQMKKVNVYRM 999 Query: 171 IAQNTIDELVLQRLRTKSTIQDLLLNA 197 +A +TI+ V++ K + ++N Sbjct: 1000 VATDTIEAKVVELQDRKRQLISSVMNG 1026 >gi|94264348|ref|ZP_01288140.1| SNF2-related:Helicase-like [delta proteobacterium MLMS-1] gi|93455242|gb|EAT05455.1| SNF2-related:Helicase-like [delta proteobacterium MLMS-1] Length = 1285 Score = 135 bits (340), Expect = 4e-30, Method: Composition-based stats. Identities = 45/208 (21%), Positives = 75/208 (36%), Gaps = 21/208 (10%) Query: 3 QYHKFQRELY--CDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKH-WKEVHDEKIKAL 59 Y +R+ + Q E S +K + E + H+ K + Sbjct: 1069 LYEALRRQALRNLEQQDEQRAPLKILSAIMKLRRACCHPRLVLPESNLPCAKHELFSKVV 1128 Query: 60 EVIIEKANAAPIIVAYHFNSDLARLQKAFP---------QGRTLDKDPCT-IQEWNEGKI 109 ++E N I+V F L +++ G T ++++ G Sbjct: 1129 SELLE--NGHRILVFSQFVDHLTLIRQLLDNQGIGYQYLDGSTPPAVRQRRVEDFQRGGK 1186 Query: 110 PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYY 169 L + G GLNL G + ++ WW+ QQ +R + G R V VY Sbjct: 1187 DLFLISLRAGGLGLNLT-GADYVIHLDPWWNPAVEQQASDR-----AHRIGQDRPVTVYR 1240 Query: 170 LIAQNTIDELVLQRLRTKSTIQDLLLNA 197 LI NTI+E +L + K + LL+ Sbjct: 1241 LITSNTIEEKILSLHQRKRNLAGDLLDG 1268 >gi|269119290|ref|YP_003307467.1| SNF2-related protein [Sebaldella termitidis ATCC 33386] gi|268613168|gb|ACZ07536.1| SNF2-related protein [Sebaldella termitidis ATCC 33386] Length = 1125 Score = 135 bits (339), Expect = 4e-30, Method: Composition-based stats. Identities = 37/203 (18%), Positives = 77/203 (37%), Gaps = 21/203 (10%) Query: 8 QRELYCDLQGENIEAFNSA--SKTVKCLQLANGA-VYYDEEKHWKEVHDEKIKALEVIIE 64 ++E+ +++ E + S + Q+ ++ D H + + + +I Sbjct: 912 KKEIENEIKNEKLSRSQIKIFSLLTRLRQICCHPKLFIDNYAHSSGKFETLFELFDDLIS 971 Query: 65 KANAAPIIVAYHFNSDLARLQKAFPQ---------GRTLDKDP-CTIQEWNEGKIPLLFA 114 + +V F + L + + G +D + +N G P+ Sbjct: 972 GNHKT--LVFSQFTTMLKLISGELKKKGIEHFYLDGSMKARDRLELVNSFNAGNTPIFLI 1029 Query: 115 HPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQN 174 + G GLNL G + ++ WW+ Q +R + G K +V V LI + Sbjct: 1030 SLKAGGTGLNLT-GSDTVIHVDPWWNPSVENQASDR-----SHRIGQKNSVQVIKLITKG 1083 Query: 175 TIDELVLQRLRTKSTIQDLLLNA 197 TI+E +++ K + D +L + Sbjct: 1084 TIEEKIMKLQNKKKKLIDNVLTS 1106 >gi|228920559|ref|ZP_04083904.1| Helicase, SWF/SNF [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] gi|228839189|gb|EEM84485.1| Helicase, SWF/SNF [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] Length = 1064 Score = 135 bits (339), Expect = 4e-30, Method: Composition-based stats. Identities = 42/206 (20%), Positives = 80/206 (38%), Gaps = 25/206 (12%) Query: 6 KFQRELYCDLQGENI--EAFNSASKTVKCLQLANG-AVYYDEEKHWKEVHDEKIKALEVI 62 K + E L + + + + Q+ A++ D+ K K + L I Sbjct: 849 KLREETLKHLDKDTLRKNKIRILAGLTRLRQICCHPALFVDDYK----GSSAKFEQLLEI 904 Query: 63 IEK--ANAAPIIVAYHFNSDL---------ARLQKAFPQGRTLDKDPCTI-QEWNEGKIP 110 +E+ + I++ F L + + G T ++ + +NEG+ Sbjct: 905 LEECRSTGKRILIFSQFTKMLSIIGRELNRQAIPYFYLDGSTPAQERVELCDRFNEGEGN 964 Query: 111 LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYL 170 L + G GLNL G + ++ + LWW+ QQ +R + G K V V L Sbjct: 965 LFLISLKAGGTGLNLT-GADTVILYDLWWNPAVEQQAADR-----AYRMGQKNTVQVIKL 1018 Query: 171 IAQNTIDELVLQRLRTKSTIQDLLLN 196 +A TI+E + + +K + ++ Sbjct: 1019 VAHGTIEEKMHELQESKKNLIAEVIE 1044 >gi|229029537|ref|ZP_04185617.1| Helicase, SWF/SNF [Bacillus cereus AH1271] gi|228731736|gb|EEL82638.1| Helicase, SWF/SNF [Bacillus cereus AH1271] Length = 1064 Score = 135 bits (339), Expect = 4e-30, Method: Composition-based stats. Identities = 43/206 (20%), Positives = 81/206 (39%), Gaps = 25/206 (12%) Query: 6 KFQRELYCDLQGENI--EAFNSASKTVKCLQLANG-AVYYDEEKHWKEVHDEKIKALEVI 62 K + E L + + + + Q+ N A++ D+ K K + L I Sbjct: 849 KLREETLKHLDKDTLRKNKIRILAGLTRLRQICNHPALFVDDYK----GSSAKFEQLLEI 904 Query: 63 IEK--ANAAPIIVAYHFNSDL---------ARLQKAFPQGRTLDKDPCTI-QEWNEGKIP 110 +E+ + I++ F L + + G T ++ + +NEG+ Sbjct: 905 LEECRSTGKRILIFSQFTKMLSIIGRELNRQAIPYFYLDGNTPSQERVELCDRFNEGEGD 964 Query: 111 LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYL 170 L + G GLNL G + ++ + LWW+ QQ +R + G K V V L Sbjct: 965 LFLISLKAGGTGLNLT-GADTVILYDLWWNPAVEQQAADR-----AYRMGQKNTVQVIKL 1018 Query: 171 IAQNTIDELVLQRLRTKSTIQDLLLN 196 +A TI+E + + +K + ++ Sbjct: 1019 VAHGTIEEKMHELQESKKNLIAEVIE 1044 >gi|225352246|ref|ZP_03743269.1| hypothetical protein BIFPSEUDO_03862 [Bifidobacterium pseudocatenulatum DSM 20438] gi|225157493|gb|EEG70832.1| hypothetical protein BIFPSEUDO_03862 [Bifidobacterium pseudocatenulatum DSM 20438] Length = 1158 Score = 135 bits (339), Expect = 5e-30, Method: Composition-based stats. Identities = 39/223 (17%), Positives = 79/223 (35%), Gaps = 30/223 (13%) Query: 2 KQYHKFQRELYCDLQGENIEAFNS-----ASKTVKCLQLANGA--VYYDEEKHWKEVHDE 54 K Y ++ L L FN+ ++ ++ VY D + Sbjct: 936 KLYAAHEQRLRATLTKTKDADFNTKKIRILAEFTLLREICCDPRLVYADAKN-----ASA 990 Query: 55 KIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRT----------LDKDPCTIQ 102 K+ A+ ++ + ++V F S L + + + + Sbjct: 991 KLDAICELVSTCMDESKKVLVFSQFTSFLDLIGTRLAEQGVDFYTITGETPKKRRVELVD 1050 Query: 103 EWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFK 162 E+N +P+ + GLNL G +++V WW+ Q +R + G Sbjct: 1051 EFNGNDVPVFLISLKAGNTGLNL-VGASVVVHADPWWNAAAQNQATDR-----AHRIGQT 1104 Query: 163 RAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIHV 205 + V VY ++A++TI+E +L+ KS + + + Sbjct: 1105 QDVNVYQIVAKDTIEERILKLQEKKSELAQQFTDGTASGGVGT 1147 >gi|309800861|ref|ZP_07694993.1| SNF2 family N-terminal domain protein [Bifidobacterium dentium JCVIHMP022] gi|308222397|gb|EFO78677.1| SNF2 family N-terminal domain protein [Bifidobacterium dentium JCVIHMP022] Length = 1277 Score = 135 bits (339), Expect = 5e-30, Method: Composition-based stats. Identities = 41/215 (19%), Positives = 80/215 (37%), Gaps = 30/215 (13%) Query: 2 KQYHKFQRELYCDLQGENIEAFNS-----ASKTVKCLQLANGA--VYYDEEKHWKEVHDE 54 K Y ++ L L FN+ ++ +L VY D + Sbjct: 1055 KLYAAHEQRLRAALTKTRDADFNTSRIRILAEFTLLRELCCDPRLVYADAKNG-----SA 1109 Query: 55 KIKALEVIIE--KANAAPIIVAYHFNSDLARL----------QKAFPQGRTLDKDPCTIQ 102 K++A++ ++ +++ F S L + A K + Sbjct: 1110 KLEAIDDLVVNCMDEGKKVLIFSQFTSFLDLIGVRLAEHGVAFHAITGETPKRKRVELVD 1169 Query: 103 EWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFK 162 E+N +P+ + GLNL G ++++ WW+ Q +R + G Sbjct: 1170 EFNGDDVPVFLISLKAGNTGLNL-VGASVVIHADPWWNEAAQNQATDR-----AHRIGQT 1223 Query: 163 RAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + V VY ++A++TI+E +L+ R KS + + Sbjct: 1224 QDVNVYRIVAKDTIEERMLKLQRDKSRLARQFTDG 1258 >gi|306822587|ref|ZP_07455965.1| conserved hypothetical protein [Bifidobacterium dentium ATCC 27679] gi|304554132|gb|EFM42041.1| conserved hypothetical protein [Bifidobacterium dentium ATCC 27679] Length = 1286 Score = 135 bits (339), Expect = 5e-30, Method: Composition-based stats. Identities = 41/215 (19%), Positives = 80/215 (37%), Gaps = 30/215 (13%) Query: 2 KQYHKFQRELYCDLQGENIEAFNS-----ASKTVKCLQLANGA--VYYDEEKHWKEVHDE 54 K Y ++ L L FN+ ++ +L VY D + Sbjct: 1064 KLYAAHEQRLRAALTKTRDADFNTSRIRILAEFTLLRELCCDPRLVYADAKNG-----SA 1118 Query: 55 KIKALEVIIE--KANAAPIIVAYHFNSDLARL----------QKAFPQGRTLDKDPCTIQ 102 K++A++ ++ +++ F S L + A K + Sbjct: 1119 KLEAIDDLVVNCMDEGKKVLIFSQFTSFLDLIGVRLAEHGVAFHAITGETPKRKRVELVD 1178 Query: 103 EWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFK 162 E+N +P+ + GLNL G ++++ WW+ Q +R + G Sbjct: 1179 EFNGDDVPVFLISLKAGNTGLNL-VGASVVIHADPWWNEAAQNQATDR-----AHRIGQT 1232 Query: 163 RAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + V VY ++A++TI+E +L+ R KS + + Sbjct: 1233 QDVNVYRIVAKDTIEERMLKLQRDKSRLARQFTDG 1267 >gi|325964972|ref|YP_004242878.1| DNA/RNA helicase, superfamily II, SNF2 family [Arthrobacter phenanthrenivorans Sphe3] gi|323471059|gb|ADX74744.1| DNA/RNA helicase, superfamily II, SNF2 family [Arthrobacter phenanthrenivorans Sphe3] Length = 1144 Score = 135 bits (339), Expect = 5e-30, Method: Composition-based stats. Identities = 44/211 (20%), Positives = 77/211 (36%), Gaps = 24/211 (11%) Query: 2 KQYH---KFQRELYCDL-QGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIK 57 K Y + +R+ L + N F QL+ A D V K+ Sbjct: 924 KVYQTHLQRERQKILGLIEDVNKNRFTIFQSLTLLRQLSLDASLVDPS--LSAVRSSKLD 981 Query: 58 ALEVIIEK--ANAAPIIVAYHFNS---------DLARLQKAFPQGRTLDKDPCTIQEWNE 106 L +E A ++ F D +++ + G T ++ + E+ Sbjct: 982 VLFEQLEDLVAEGHRALIFSQFTGFLGKVRERLDEEKIEYCYLDGGTRNR-ADVVNEFKN 1040 Query: 107 GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVF 166 G P+ + G GLNL + + WW+ Q ++R + G R V Sbjct: 1041 GSAPVFLISLKAGGFGLNLTE-ADYVFLLDPWWNPASEAQAVDR-----THRIGQARNVM 1094 Query: 167 VYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 VY L+A++TI+E V+ KS + ++ Sbjct: 1095 VYRLVAKDTIEEKVMALKARKSQLFSDVMEG 1125 >gi|269796289|ref|YP_003315744.1| DNA/RNA helicase [Sanguibacter keddieii DSM 10542] gi|269098474|gb|ACZ22910.1| DNA/RNA helicase, superfamily II, SNF2 family [Sanguibacter keddieii DSM 10542] Length = 1227 Score = 135 bits (339), Expect = 5e-30, Method: Composition-based stats. Identities = 44/205 (21%), Positives = 88/205 (42%), Gaps = 19/205 (9%) Query: 3 QYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVI 62 Y + +R L E E +++ L+ A+ V + +H ++V K++ L + Sbjct: 1012 AYLQRERTKVLGLVDEFGEHRFEVFRSLTVLRQASLDVSLVDAEH-EKVPSSKLEVLYEM 1070 Query: 63 IEK--ANAAPIIVAYHFNSDLARLQ---------KAFPQGRTLDKDPCTIQEWNEGKIPL 111 ++ A ++V F L R++ ++ GRT + TI+ + G+ + Sbjct: 1071 LDDILAEGHSVLVFSQFTQFLGRVRAHLDRKDVDYSYLDGRTR-RRAETIERFTSGETKV 1129 Query: 112 LFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLI 171 + G GLNL + + WW+ Q ++R + G R V VY ++ Sbjct: 1130 FLISLKAGGFGLNLT-AADYCILLDPWWNPAAEAQAVDR-----AHRIGQTRNVNVYRMV 1183 Query: 172 AQNTIDELVLQRLRTKSTIQDLLLN 196 + +TI+E V+ +KS + +L+ Sbjct: 1184 STDTIEEKVMALKASKSKLFASVLD 1208 >gi|302548243|ref|ZP_07300585.1| SNF2/helicase domain protein [Streptomyces hygroscopicus ATCC 53653] gi|302465861|gb|EFL28954.1| SNF2/helicase domain protein [Streptomyces himastatinicus ATCC 53653] Length = 554 Score = 135 bits (339), Expect = 5e-30, Method: Composition-based stats. Identities = 41/214 (19%), Positives = 86/214 (40%), Gaps = 23/214 (10%) Query: 3 QYHKFQRELYCDLQGENIEAFNSA--SKTVKCLQLANG-AVYYDEEKHWKEVHDEKIKAL 59 Y RE+ ++ G + A Q+ N A + E++ K++ L Sbjct: 327 LYEAVVREILAEIAGADGLARRGLIVKLLTGLKQICNHPAQFLKEDRPVVPGRSGKLELL 386 Query: 60 EVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGR-----------TLDKDPCTIQEWNE 106 + +++ A A ++V + AR+ +A R + + ++ + + Sbjct: 387 DELLDTILAEGASVLVFTQYVQM-ARILEAHLTARGVPLQLLHGGTPVARREEMVRRFQD 445 Query: 107 GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVF 166 G+ P+ + G GLNL G+ +V + WW+ Q +R + G + V Sbjct: 446 GEAPVFLLSLKAAGTGLNLTRAGH-VVHYDRWWNPAVEAQATDR-----AYRIGQTQPVQ 499 Query: 167 VYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKK 200 V+ LI + T+++ + L K + D +L + + Sbjct: 500 VHRLITEGTVEDRIAAMLERKRELADAVLGSGEA 533 >gi|125974243|ref|YP_001038153.1| SNF2-related protein [Clostridium thermocellum ATCC 27405] gi|125714468|gb|ABN52960.1| SNF2-related protein [Clostridium thermocellum ATCC 27405] Length = 375 Score = 135 bits (339), Expect = 5e-30, Method: Composition-based stats. Identities = 47/206 (22%), Positives = 91/206 (44%), Gaps = 26/206 (12%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEV 61 K+Y KF+++ + GE + + +K + QL + +Y + K + L+ Sbjct: 192 KEYKKFKKDRVITIDGETLAGDTALTKLLYLRQLTS--IY----------NSNKHQVLKD 239 Query: 62 IIEKANAAPIIVAYHFNSDLARLQK-AFPQGRTL---DKDPCTIQEWNEGKIPLLFAHPA 117 I E +N ++ Y+F + ++ F R + + D ++ + + Sbjct: 240 IFESSNDR-FVIFYNFKREFEIIKNICFKIDRPISYINGDGTDLENYENKSNSITLVQYQ 298 Query: 118 SCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 + G+NLQ N +++FSL E Q +RI + G R F YYLI +N+I+ Sbjct: 299 AGASGVNLQK-ANRIIYFSLPLSSEFWMQSKKRI-----HRIGQNRTCFYYYLITENSIE 352 Query: 178 ELVLQRLRTKSTIQDLLLNALKKETI 203 E +L+ L+ + D + +KE + Sbjct: 353 EKILEVLKQRR---DFTVELFEKEML 375 >gi|307705331|ref|ZP_07642193.1| SNF2 family N-terminal domain protein [Streptococcus mitis SK597] gi|307621118|gb|EFO00193.1| SNF2 family N-terminal domain protein [Streptococcus mitis SK597] Length = 1048 Score = 135 bits (339), Expect = 5e-30, Method: Composition-based stats. Identities = 37/207 (17%), Positives = 79/207 (38%), Gaps = 23/207 (11%) Query: 9 RELYCDLQGENIE--AFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIE-- 64 +E+ + I+ + + Q+ N + E+ + K+ +L +++ Sbjct: 836 QEMVAGASADEIKRHKIEILAGLTRLRQICNTPALFLED---YKGDSGKMDSLFELLDTI 892 Query: 65 KANAAPIIVAYHFNSDLARLQKAFPQGR----------TLDKDPCTIQEWNEGKIPLLFA 114 + + ++ F S L +++ + DK + +N+G+ Sbjct: 893 REKGSRPLIFSQFTSMLDLIEQELEKKEMSHFKITGQTPSDKRQEMVNLFNQGEKDCFLI 952 Query: 115 HPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQN 174 + G GLNL G + ++ LWW+ Q I R + G + V VY LI Sbjct: 953 SLKAGGTGLNLT-GADTVILCDLWWNPAVEMQAISR-----SHRLGQTKQVDVYRLITLG 1006 Query: 175 TIDELVLQRLRTKSTIQDLLLNALKKE 201 TI+E + + +K + + +L + Sbjct: 1007 TIEEKIQELQESKKELFNTVLEGQESR 1033 >gi|283456215|ref|YP_003360779.1| helicase [Bifidobacterium dentium Bd1] gi|283102849|gb|ADB09955.1| Helicase [Bifidobacterium dentium Bd1] Length = 1274 Score = 134 bits (338), Expect = 6e-30, Method: Composition-based stats. Identities = 41/215 (19%), Positives = 79/215 (36%), Gaps = 30/215 (13%) Query: 2 KQYHKFQRELYCDLQGENIEAFNS-----ASKTVKCLQLANGA--VYYDEEKHWKEVHDE 54 K Y ++ L L FN+ ++ +L VY D + Sbjct: 1052 KLYAAHEQRLRAALTKTRDADFNTSRIRILAEFTLLRELCCDPRLVYADAKNG-----SA 1106 Query: 55 KIKALEVIIE--KANAAPIIVAYHFNSDLARL----------QKAFPQGRTLDKDPCTIQ 102 K++A++ ++ +++ F S L + A K + Sbjct: 1107 KLEAIDDLVANCMDEGKKVLIFSQFTSFLDLIGVRLAEHGVAFHAITGETPKRKRVELVD 1166 Query: 103 EWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFK 162 E+N P+ + GLNL G ++++ WW+ Q +R + G Sbjct: 1167 EFNGDDAPVFLISLKAGNTGLNL-VGASVVIHADPWWNEAAQNQATDR-----AHRIGQT 1220 Query: 163 RAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + V VY ++A++TI+E +L+ R KS + + Sbjct: 1221 QDVNVYRIVAKDTIEERMLKLQRDKSRLARQFTDG 1255 >gi|323359978|ref|YP_004226374.1| superfamily II DNA/RNA helicase, SNF2 family [Microbacterium testaceum StLB037] gi|323276349|dbj|BAJ76494.1| superfamily II DNA/RNA helicase, SNF2 family [Microbacterium testaceum StLB037] Length = 983 Score = 134 bits (338), Expect = 6e-30, Method: Composition-based stats. Identities = 46/201 (22%), Positives = 81/201 (40%), Gaps = 17/201 (8%) Query: 6 KFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKAL-EVIIE 64 + +R+ L + +++ L++ A +++ + K+ L E ++E Sbjct: 770 QRERQKVLGLLDDLDRQRFIVFRSLTLLRMLALAPSLVDDRDA-HLGSAKLDVLLERLVE 828 Query: 65 -KANAAPIIVAYHFNSDL----ARLQKAFPQGRTLD----KDPCTIQEWNEGKIPLLFAH 115 A +V F S L RL A LD + + + G+ P+ Sbjct: 829 VTAEGHRALVFSQFTSFLDMAAERLDAAGLAYAHLDGSTARRGDVVAGFRAGEAPVFLIS 888 Query: 116 PASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNT 175 + G GL L + V WW+ Q I+R + G ++VFVY LIA T Sbjct: 889 LKAGGFGLTLTEADYVFVL-DPWWNPAAEAQAIDR-----AHRIGQDKSVFVYRLIAAGT 942 Query: 176 IDELVLQRLRTKSTIQDLLLN 196 I+E VL R K+ + D +++ Sbjct: 943 IEEKVLALQRRKAALFDAVID 963 >gi|295319060|gb|ADF99437.1| helicase, SNF2/RAD54 family [Clostridium botulinum F str. 230613] Length = 1050 Score = 134 bits (338), Expect = 6e-30, Method: Composition-based stats. Identities = 47/205 (22%), Positives = 80/205 (39%), Gaps = 27/205 (13%) Query: 2 KQYHKF----QRELYCDLQ--GENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEK 55 K Y F ++E Y +++ G N S + Q+ + E E + K Sbjct: 851 KVYASFAESAKKEFYKEIRERGFNKSKIKILSIITRLRQICCDPSTFIEN---YEGSNGK 907 Query: 56 IKALEVIIEKA--NAAPIIVAYHFNSDLARLQKAFP---------QGRTL-DKDPCTIQE 103 + L I+ + I++ F S L + + F G T D +++ Sbjct: 908 TETLLDIVNSSINAGHKILLFSQFTSVLKNIAEVFKANNINYLYLDGSTKADVRGSLVKD 967 Query: 104 WNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKR 163 +N GK + + G GLNL +I++ F WW+ Q +R + G K+ Sbjct: 968 FNNGKGDIFLISLKAGGTGLNLT-SADIVIHFDPWWNPAVEDQASDR-----AHRIGQKK 1021 Query: 164 AVFVYYLIAQNTIDELVLQRLRTKS 188 V V LIA+ TI+E + + K Sbjct: 1022 TVEVIRLIAKGTIEEKIYKITTKKE 1046 >gi|159898290|ref|YP_001544537.1| non-specific serine/threonine protein kinase [Herpetosiphon aurantiacus ATCC 23779] gi|159891329|gb|ABX04409.1| Non-specific serine/threonine protein kinase [Herpetosiphon aurantiacus ATCC 23779] Length = 1055 Score = 134 bits (338), Expect = 6e-30, Method: Composition-based stats. Identities = 38/210 (18%), Positives = 75/210 (35%), Gaps = 23/210 (10%) Query: 2 KQYHKFQRELYCDLQGEN---IEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKA 58 ++Y R + L + ++ Q+ N + H K Sbjct: 837 QRYRDQYRAMLLSLIDDQGINDSRIKVLEGLLRLRQICNHPQLVEAT---FRGHSAKFDQ 893 Query: 59 LEVIIE--KANAAPIIVAYHFNSDLARL---------QKAFPQGRTLDKDPCTIQEWNEG 107 L +E A ++ F L L A+ G+T ++ + + Sbjct: 894 LLETLEVLHAEGHKALIFSQFVQMLTLLWKELDRRNLSYAYLDGKTNNRAAVVDRFQTDP 953 Query: 108 KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFV 167 +I + G GLNL + ++ WW+ QQ +R + G + VF+ Sbjct: 954 QIHFFLISLKAGGVGLNLT-AADYVIHIDPWWNPAVEQQATDR-----THRIGQDKPVFI 1007 Query: 168 YYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 Y LI +N+++E +LQ K + + ++ + Sbjct: 1008 YKLIVRNSVEEKILQLQERKRALANNIITS 1037 >gi|260890109|ref|ZP_05901372.1| hypothetical protein GCWU000323_01271 [Leptotrichia hofstadii F0254] gi|260860132|gb|EEX74632.1| putative SNF2 family N- domain protein [Leptotrichia hofstadii F0254] Length = 988 Score = 134 bits (338), Expect = 6e-30, Method: Composition-based stats. Identities = 38/205 (18%), Positives = 80/205 (39%), Gaps = 21/205 (10%) Query: 4 YHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVII 63 Y K + + K Q+ N + E+ + K++ L ++ Sbjct: 772 YIKKAKSEMKKFNENENNRMKILAILTKLRQICNSPTLFKEDYKGEV---AKLEVLRDLM 828 Query: 64 EK--ANAAPIIVAYHFNSDLARLQKAFP---------QGRTLDKDPCTI-QEWNEGKIPL 111 N +++ F L ++K G K+ I ++N G+ + Sbjct: 829 PDIIENGHRLLIFSQFVGTLKEIEKELENMGIEYFYIDGSVKSKERVDICNKFNAGERQV 888 Query: 112 LFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLI 171 + + G GLNL G ++++ + WW++ Q +R + G K++V V L+ Sbjct: 889 VLISLKAGGTGLNL-VGADVVIHYDPWWNIAVENQASDR-----AYRIGQKKSVQVIKLV 942 Query: 172 AQNTIDELVLQRLRTKSTIQDLLLN 196 + TI+E +++ +K + + LL Sbjct: 943 TEGTIEEKIIKIQESKRKLSENLLE 967 >gi|310828799|ref|YP_003961156.1| hypothetical protein ELI_3224 [Eubacterium limosum KIST612] gi|308740533|gb|ADO38193.1| hypothetical protein ELI_3224 [Eubacterium limosum KIST612] Length = 573 Score = 134 bits (338), Expect = 7e-30, Method: Composition-based stats. Identities = 38/224 (16%), Positives = 85/224 (37%), Gaps = 31/224 (13%) Query: 2 KQYHKFQRELYCDLQG-ENIEAFNSASKTVKCLQLANGAVYYDEEK--------HWKEVH 52 + Y ++ +L + A + ++ ++ Q+ G V D E + Sbjct: 349 RAYRDLVKDSIAELDNLPAVTAQHVITQLLRLSQICGGFVKLDTEGYENDPNAGKLIPIS 408 Query: 53 DEKIKALEVIIEKA---NAAPIIVAYHFNSDLARLQKAFPQ------------GRTLDKD 97 KIK E ++ ++V F +++ L++ + D Sbjct: 409 KAKIKLFEELLGDLLSVEGKKVVVFARFTAEIKLLREVLEKQLGADGYRMIDGSVPKDVR 468 Query: 98 PCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 ++++ I + A + G G+ L + V++S + ++Q R Sbjct: 469 GEYVEDFQKNPAIRVFLAQIQTAGLGITLT-AADTTVYYSTDYSYAAYEQSRAR-----T 522 Query: 157 RQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKK 200 + G K +L+ ++T+DE +L+ L K +I DL ++ +K Sbjct: 523 HRIGQKNNCTYIHLVVKDTVDEKILEALSQKKSIADLCVDNYQK 566 >gi|171742723|ref|ZP_02918530.1| hypothetical protein BIFDEN_01837 [Bifidobacterium dentium ATCC 27678] gi|171278337|gb|EDT45998.1| hypothetical protein BIFDEN_01837 [Bifidobacterium dentium ATCC 27678] Length = 1283 Score = 134 bits (338), Expect = 7e-30, Method: Composition-based stats. Identities = 41/215 (19%), Positives = 79/215 (36%), Gaps = 30/215 (13%) Query: 2 KQYHKFQRELYCDLQGENIEAFNS-----ASKTVKCLQLANGA--VYYDEEKHWKEVHDE 54 K Y ++ L L FN+ ++ +L VY D + Sbjct: 1061 KLYAAHEQRLRAALTKTRDADFNTSRIRILAEFTLLRELCCDPRLVYADAKNG-----SA 1115 Query: 55 KIKALEVIIE--KANAAPIIVAYHFNSDLARL----------QKAFPQGRTLDKDPCTIQ 102 K++A++ ++ +++ F S L + A K + Sbjct: 1116 KLEAIDDLVANCMDEGKKVLIFSQFTSFLDLIGVRLAEHGVAFHAITGETPKRKRVELVD 1175 Query: 103 EWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFK 162 E+N P+ + GLNL G ++++ WW+ Q +R + G Sbjct: 1176 EFNGDDAPVFLISLKAGNTGLNL-VGASVVIHADPWWNEAAQNQATDR-----AHRIGQT 1229 Query: 163 RAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + V VY ++A++TI+E +L+ R KS + + Sbjct: 1230 QDVNVYRIVAKDTIEERMLKLQRDKSRLARQFTDG 1264 >gi|227495218|ref|ZP_03925534.1| SNF2 family superfamily II DNA/RNA helicase [Actinomyces coleocanis DSM 15436] gi|226831670|gb|EEH64053.1| SNF2 family superfamily II DNA/RNA helicase [Actinomyces coleocanis DSM 15436] Length = 1048 Score = 134 bits (338), Expect = 7e-30, Method: Composition-based stats. Identities = 45/217 (20%), Positives = 85/217 (39%), Gaps = 23/217 (10%) Query: 2 KQYHKF----QRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIK 57 K Y ++ ++EL + + + F + + QLA +++K W E K + Sbjct: 832 KTYDRYLNQHRKELLALAEDTHSQGFKIITGLNQLRQLALDPQLVEKDKDWPE--SAKTQ 889 Query: 58 ALEVIIE--KANAAPIIVAYHFNSDLARLQKAFPQGRTL--------DKDPCTIQEWNEG 107 AL ++ +A +V + S L R++ A + K I+ + Sbjct: 890 ALIDLLLPLQAEGKKSLVFSQYTSYLQRIRTALNEAGITTSYLDGGTQKRGEVIENFKHS 949 Query: 108 KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFV 167 + + G GL L N+ + WW+ Q I+R + G + V V Sbjct: 950 DTNVFLISLKAGGTGLTLTEAENVFIL-DPWWNPATENQAIDR-----AHRIGQENTVNV 1003 Query: 168 YYLIAQNTIDELVLQRLRTKSTIQDLLL-NALKKETI 203 Y L + +TI+E V+ K + D ++ +K +I Sbjct: 1004 YRLCSADTIEEKVMALQVHKRQVADAIIGEEVKALSI 1040 >gi|254443939|ref|ZP_05057415.1| SNF2 family N-terminal domain protein [Verrucomicrobiae bacterium DG1235] gi|198258247|gb|EDY82555.1| SNF2 family N-terminal domain protein [Verrucomicrobiae bacterium DG1235] Length = 799 Score = 134 bits (338), Expect = 7e-30, Method: Composition-based stats. Identities = 42/226 (18%), Positives = 82/226 (36%), Gaps = 41/226 (18%) Query: 5 HKFQRELYCDLQGENIE------------------------AFNSASKTVKCLQLANGAV 40 + +++++CDL+GE + AFN ++ Q+ Sbjct: 561 DRIEKDIFCDLEGEQRKRYDLELDEARAMLKSAKEGGQSTGAFNVLQALLRLRQICCDPE 620 Query: 41 YYDEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAF---------P 89 D ++V K++AL ++E A ++V F S L ++ Sbjct: 621 LLDTSGDREDVESAKMQALLDLLEPLVAEGHKVLVFSQFVSLLEIAERELHAIGIGSLKL 680 Query: 90 QGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIE 149 G+T + + + + G GL L + +V WW+ Q I+ Sbjct: 681 TGKTKRRGELVEHFQKGNEEQVFLLSLKAAGSGLTLT-AASYVVLLDPWWNPAVEAQAID 739 Query: 150 RIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 R + G K V Y ++A++T++E + + KS + L Sbjct: 740 R-----AHRIGQKDQVIAYRILAKDTVEEKIRKIQAEKSELAAALF 780 >gi|163795414|ref|ZP_02189381.1| swf/snf family helicase [alpha proteobacterium BAL199] gi|159179400|gb|EDP63931.1| swf/snf family helicase [alpha proteobacterium BAL199] Length = 1385 Score = 134 bits (337), Expect = 7e-30, Method: Composition-based stats. Identities = 40/210 (19%), Positives = 77/210 (36%), Gaps = 25/210 (11%) Query: 4 YHKFQRELYCDLQGENIEA----FNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKAL 59 Y +R+ L + A ++ + + D++ V K+ A Sbjct: 1167 YEALRRQSLDRLAAVDAPAGQRKIQILAEITRLRRACCNPALIDQD---AGVPSGKLAAF 1223 Query: 60 EVIIEKA--NAAPIIVAYHFNSDLAR---------LQKAFPQGRTLDKD-PCTIQEWNEG 107 +++ N +V F + LA ++ + G T D + + G Sbjct: 1224 LDLVDDLVRNRHRALVFSQFVAHLALVRAALDARGIRYEYLDGSTPAADRERRVAAFQAG 1283 Query: 108 KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFV 167 + + G GLNL + +V WW+ Q +R+ + G +R V + Sbjct: 1284 TADVFLISLRAGGTGLNLT-AADYVVHLDPWWNPAVEDQASDRV-----HRIGQERPVTI 1337 Query: 168 YYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 Y LI Q++I+E +L+ R K + +L Sbjct: 1338 YRLIMQDSIEEQILRLHRDKRDLAADILEG 1367 >gi|258650324|ref|YP_003199480.1| SNF2-like protein [Nakamurella multipartita DSM 44233] gi|258553549|gb|ACV76491.1| SNF2-related protein [Nakamurella multipartita DSM 44233] Length = 1141 Score = 134 bits (337), Expect = 7e-30, Method: Composition-based stats. Identities = 41/179 (22%), Positives = 71/179 (39%), Gaps = 24/179 (13%) Query: 32 CLQLANGAVYYDEEKHWKEVHDEKIKALEV----IIEKANAAPIIVAYHFNSDLAR---- 83 QL+ DE ++++ K++ I+E ++V F LAR Sbjct: 952 LRQLSLDPSLVDES--YRDIPSSKLEVAIDRICEIVES--GHRVLVFSQFTRFLARARDQ 1007 Query: 84 -----LQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLW 138 + GRT D+ ++ + G P+ + G GLNL + + W Sbjct: 1008 LHHLGIAHCLLDGRTKDR-SAVVEAFRTGVAPVFLISLKAGGFGLNLTE-ADYCILLDPW 1065 Query: 139 WDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 W+ Q I+R + G + V VY +A+ TI+E V+ K+ + D +L A Sbjct: 1066 WNPAAEAQAIDR-----AHRIGQTKNVIVYRYVARGTIEEKVMALKAGKAKLFDDVLGA 1119 >gi|163796791|ref|ZP_02190749.1| swf/snf family helicase [alpha proteobacterium BAL199] gi|159178045|gb|EDP62592.1| swf/snf family helicase [alpha proteobacterium BAL199] Length = 1385 Score = 134 bits (337), Expect = 8e-30, Method: Composition-based stats. Identities = 40/210 (19%), Positives = 77/210 (36%), Gaps = 25/210 (11%) Query: 4 YHKFQRELYCDLQGENIEA----FNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKAL 59 Y +R+ L + A ++ + + D++ V K+ A Sbjct: 1167 YEALRRQSLDRLAAVDAPAGQRKIQILAEITRLRRACCNPALIDQD---AGVPSGKLAAF 1223 Query: 60 EVIIEKA--NAAPIIVAYHFNSDLAR---------LQKAFPQGRTLDKD-PCTIQEWNEG 107 +++ N +V F + LA ++ + G T D + + G Sbjct: 1224 LDLVDDLVRNRHRALVFSQFVAHLALVRAALDARGIRYEYLDGSTPAADRERRVAAFQAG 1283 Query: 108 KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFV 167 + + G GLNL + +V WW+ Q +R+ + G +R V + Sbjct: 1284 TADVFLISLRAGGTGLNLT-AADYVVHLDPWWNPAVEDQASDRV-----HRIGQERPVTI 1337 Query: 168 YYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 Y LI Q++I+E +L+ R K + +L Sbjct: 1338 YRLIMQDSIEEQILRLHRDKRDLAADILEG 1367 >gi|281415208|ref|ZP_06246950.1| DNA/RNA helicase, superfamily II, SNF2 family protein [Micrococcus luteus NCTC 2665] Length = 630 Score = 134 bits (337), Expect = 8e-30, Method: Composition-based stats. Identities = 50/213 (23%), Positives = 85/213 (39%), Gaps = 30/213 (14%) Query: 2 KQYHK-FQRE------LYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDE 54 K Y + QRE L D+ G F S + LA D+ + V Sbjct: 403 KLYDRVLQRERRKVLGLLGDMDGNRFTIFKSLTL---LRMLALAPQIVDD--QYASVPSS 457 Query: 55 KIKA-LEVIIEK-ANAAPIIVAYHFNSDLA---------RLQKAFPQGRTLDKDPCTIQE 103 K++ L+ + E +IV F S L ++ A+ G T + I+ Sbjct: 458 KLERFLDDLTEVIGEGHRVIVFSQFTSFLRVIAEELDHLEIEHAYLDGSTRGR-ADVIRG 516 Query: 104 WNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKR 163 + EG+ P+ + G GL L + + WW+ Q ++R + G +R Sbjct: 517 FREGEAPVFLISLKAGGFGLTLTE-ADYVFLMDPWWNPAAEAQAVDR-----AHRIGQER 570 Query: 164 AVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 V VY L+++ TI+E VL+ K+ + L++ Sbjct: 571 TVMVYRLVSEGTIEEKVLELQWRKAELFGALMD 603 >gi|326317215|ref|YP_004234887.1| SNF2-like protein [Acidovorax avenae subsp. avenae ATCC 19860] gi|323374051|gb|ADX46320.1| SNF2-related protein [Acidovorax avenae subsp. avenae ATCC 19860] Length = 947 Score = 134 bits (337), Expect = 9e-30, Method: Composition-based stats. Identities = 36/200 (18%), Positives = 69/200 (34%), Gaps = 22/200 (11%) Query: 12 YCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEK--ANAA 69 + +G +K Q+ + K+ L ++ A Sbjct: 703 VLERRGFEGGLITILDALLKLRQVCCDPRLVKGLPDAHGMESAKLDRLAELLPALVAEGR 762 Query: 70 PIIVAYHFNSDLARLQKAFP----------QGRTLDKDPCTIQEWN----EGKIPLLFAH 115 ++V F L + + ++ + EG P+L A Sbjct: 763 RVLVFSQFTGMLELAGQRLDALGLTWLALTGATAPRQRASVVRCFQDPSAEGSAPILLAS 822 Query: 116 PASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNT 175 + G GLNL + +V WW+ +Q R + G + VFV++L+A+ + Sbjct: 823 LKAGGTGLNLT-AADTVVHLDPWWNPAVMEQASAR-----AHRIGQDKPVFVHHLVAEGS 876 Query: 176 IDELVLQRLRTKSTIQDLLL 195 I+E +L+ K + D +L Sbjct: 877 IEERMLELQARKQALADGVL 896 >gi|94309439|ref|YP_582649.1| SNF2-like protein [Cupriavidus metallidurans CH34] gi|93353291|gb|ABF07380.1| Superfamily II DNA/RNA helicase, SNF2 family [Cupriavidus metallidurans CH34] Length = 1025 Score = 134 bits (337), Expect = 9e-30, Method: Composition-based stats. Identities = 38/193 (19%), Positives = 71/193 (36%), Gaps = 21/193 (10%) Query: 24 NSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIE--KANAAPIIVAYHFNSDL 81 + ++ ++ + A + K++A + AN +V F L Sbjct: 825 HVLAQLMRMRRAACDPRLVTPD---VGQPGAKVRAFAELAATLAANGHKTLVFSQFVDFL 881 Query: 82 ARLQKAFPQGRTL----------DKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNI 131 L++A + + + G+ + + G GLNL + Sbjct: 882 QMLRQALVDAGLAWQYLDGATPAGERTRRVAAFQAGEGDVFLISLKAGGFGLNLT-AADY 940 Query: 132 LVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQ 191 +V WW+ Q + R + G +R V VY LIA TI+E ++ + K + Sbjct: 941 IVIADPWWNPAAEDQAMGR-----AHRIGQQRPVTVYRLIAAGTIEERIVDLHQGKRALA 995 Query: 192 DLLLNALKKETIH 204 D +L+A+ E I Sbjct: 996 DGVLDAMDGEAIG 1008 >gi|260905640|ref|ZP_05913962.1| DNA/RNA helicase, superfamily II, SNF2 family protein [Brevibacterium linens BL2] Length = 1012 Score = 133 bits (336), Expect = 9e-30, Method: Composition-based stats. Identities = 45/209 (21%), Positives = 81/209 (38%), Gaps = 23/209 (11%) Query: 2 KQYH---KFQRELYCDLQGENIEAFNSAS-KTVKCLQLANGAVYYDEEKHWKEVHDEKIK 57 K Y + +R+ + +++ L++ + +H + VH K+ Sbjct: 781 KLYDRVLQKERKKILGFIDSEYDKQRFIVFRSLTLLRMLALDPRIVDGEH-EGVHSSKLA 839 Query: 58 ALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFP---------QGRTLDKDPCTIQEWNE 106 AL +E A IV F S L ++ + G T ++ + E+ Sbjct: 840 ALMERLEDVVAEGHRSIVFSQFTSFLDKVAEDLDRRGVPYVVLDGSTRNR-GQVVDEFRS 898 Query: 107 GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVF 166 G P+ + G GLNL + + WW+ Q I+R + G + V Sbjct: 899 GAAPVFLISLKAGGFGLNLTE-ADYVFLMDPWWNPATENQAIDR-----AHRIGQTKNVM 952 Query: 167 VYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 VY +A+ TI+E VL + K+ + D L+ Sbjct: 953 VYRYVAEGTIEEKVLALQKKKAELFDSLM 981 >gi|169832962|ref|YP_001694930.1| Snf2 family protein [Streptococcus pneumoniae Hungary19A-6] gi|168995464|gb|ACA36076.1| Snf2 family protein [Streptococcus pneumoniae Hungary19A-6] Length = 1032 Score = 133 bits (336), Expect = 9e-30, Method: Composition-based stats. Identities = 37/208 (17%), Positives = 79/208 (37%), Gaps = 23/208 (11%) Query: 9 RELYCDLQGENI--EAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIE-- 64 R+ + + S ++ Q+ + + E+ + K+ +L ++ Sbjct: 816 RDRLAQVSDQEFQRSRVEILSGLMRLRQICDTPALFMED---YQGASGKLDSLRDLLVQV 872 Query: 65 KANAAPIIVAYHFNSDLARLQKAFPQ---------GRTLDKDPCTI-QEWNEGKIPLLFA 114 +++ F L ++++ P G T K+ + + +N+G+ Sbjct: 873 ADGGHRVLIFSQFKGMLEKIEQELPDLGLTSFKITGSTPAKERQDMTKAFNQGERDAFLI 932 Query: 115 HPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQN 174 + G GLNL G + ++ LWW+ Q I R + G + V VY L+ Q Sbjct: 933 SLKAGGVGLNLT-GADTVILVDLWWNPAVEAQAIGR-----AHRMGQEETVEVYRLVTQG 986 Query: 175 TIDELVLQRLRTKSTIQDLLLNALKKET 202 TI+E + + K + +L+ + Sbjct: 987 TIEEKIQELQEQKKHLVSQVLDGTESRG 1014 >gi|149200479|ref|ZP_01877493.1| hypothetical protein LNTAR_13447 [Lentisphaera araneosa HTCC2155] gi|149136441|gb|EDM24880.1| hypothetical protein LNTAR_13447 [Lentisphaera araneosa HTCC2155] Length = 1021 Score = 133 bits (336), Expect = 9e-30, Method: Composition-based stats. Identities = 45/212 (21%), Positives = 82/212 (38%), Gaps = 25/212 (11%) Query: 3 QYHKFQRELYCDLQGENIEAFN-----SASKTVKCLQLANGAVYYDEEKHWKEVHDEKIK 57 Y D+ + AF+ S + Q + EE KE+ K + Sbjct: 800 LYKNIAENFLQDILQDQ-TAFSKRRLDILSLITRLRQTCSHPALLPEEFKAKEIESSKFQ 858 Query: 58 ALEVIIEKANA--APIIVAYHFNSDLAR---------LQKAFPQGRTLDKDPCTIQEWNE 106 + ++E+ +V F S L+ ++ + G T + + ++NE Sbjct: 859 LFQELVEEIRDSSHRALVFSQFTSMLSLMREWLDEQGIKYCYLDGSTKKRQ-DLVDQFNE 917 Query: 107 GK-IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 I + G GLNL G + ++ + WW+ Q +R + G R V Sbjct: 918 DDSIQFFLLSLKAGGTGLNLT-GADTVIHYDNWWNPMVVNQASDR-----AHRIGQTRNV 971 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + L+AQNTI++ ++Q +TK + D L+ Sbjct: 972 NIIKLVAQNTIEDKIIQLQKTKEKLFDQLVEG 1003 >gi|307127728|ref|YP_003879759.1| SWF/SNF family ATP-dependent RNA helicase [Streptococcus pneumoniae 670-6B] gi|306484790|gb|ADM91659.1| SWF/SNF family ATP-dependent RNA helicase [Streptococcus pneumoniae 670-6B] Length = 1032 Score = 133 bits (336), Expect = 1e-29, Method: Composition-based stats. Identities = 36/208 (17%), Positives = 79/208 (37%), Gaps = 23/208 (11%) Query: 9 RELYCDLQGENI--EAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIE-- 64 R+ + + S ++ Q+ + + E+ + K+ +L ++ Sbjct: 816 RDHLAQVSEQEFQRSRVEILSGLMRLRQICDTPALFMED---YQGASGKLDSLRDLLVQV 872 Query: 65 KANAAPIIVAYHFNSDLARLQKAFPQ---------GRTLDKDPCTI-QEWNEGKIPLLFA 114 +++ F L ++++ P G T K+ + + +N+G+ Sbjct: 873 ADGGHRVLIFSQFKGMLEKIEQELPDLGLTSFKITGSTPSKERQDMTKAFNQGERDAFLI 932 Query: 115 HPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQN 174 + G GLNL G + ++ LWW+ Q I R + G + V VY L+ + Sbjct: 933 SLKAGGVGLNLT-GADTVILVDLWWNPAVEAQAIGR-----AHRMGQEETVEVYRLVTKG 986 Query: 175 TIDELVLQRLRTKSTIQDLLLNALKKET 202 TI+E + + K + +L+ + Sbjct: 987 TIEEKIQELQEQKKHLVSQVLDGTESRG 1014 >gi|163798351|ref|ZP_02192275.1| swf/snf family helicase [alpha proteobacterium BAL199] gi|159176371|gb|EDP60962.1| swf/snf family helicase [alpha proteobacterium BAL199] Length = 1048 Score = 133 bits (336), Expect = 1e-29, Method: Composition-based stats. Identities = 40/210 (19%), Positives = 76/210 (36%), Gaps = 25/210 (11%) Query: 4 YHKFQRELYCDLQGENIEA----FNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKAL 59 Y +R+ L + A ++ + + D++ V K+ A Sbjct: 830 YEALRRQSLDRLAAVDAPAGQRKIQILAEITRLRRACCNPALIDQD---AGVPSGKLAAF 886 Query: 60 EVIIEKA--NAAPIIVAYHFNSDLAR---------LQKAFPQGRTLDKD-PCTIQEWNEG 107 +++ N +V F + LA ++ + G T D + + G Sbjct: 887 LDLVDDLVRNRHRALVFSQFVAHLALVRAALDARGIRYEYLDGSTPAADRERRVAAFQAG 946 Query: 108 KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFV 167 + + G GLNL + +V WW+ Q +R + G +R V + Sbjct: 947 TADVFLISLRAGGTGLNLT-AADYVVHLDPWWNPAVEDQASDR-----AHRIGQERPVTI 1000 Query: 168 YYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 Y LI Q++I+E +L+ R K + +L Sbjct: 1001 YRLIMQDSIEEQILRLHRDKRDLAADILEG 1030 >gi|51244847|ref|YP_064731.1| helicase [Desulfotalea psychrophila LSv54] gi|50875884|emb|CAG35724.1| probable helicase [Desulfotalea psychrophila LSv54] Length = 1399 Score = 133 bits (336), Expect = 1e-29, Method: Composition-based stats. Identities = 39/209 (18%), Positives = 76/209 (36%), Gaps = 24/209 (11%) Query: 4 YHKFQRELYCDLQGENIEA---FNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 Y ++ L+G ++ +K Q D+ + K+K Sbjct: 1180 YEALRQNALDILEGNKDRKGRHLQILTEIMKLRQACCNPRLIDKN---TSISSSKMKVFG 1236 Query: 61 VIIEKANA--APIIVAYHFNSDLARLQKAFPQ---------GRTLDK-DPCTIQEWNEGK 108 ++E+ +V F L +++ + G T K + ++ GK Sbjct: 1237 DVVEELLGGNHKALVFSQFIGHLHIIREYLDERGISYQYLDGSTSSKMREKGVNDFQAGK 1296 Query: 109 IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVY 168 L + G GLNL + ++ WW+ Q +R + G R V VY Sbjct: 1297 GDLFLISLKAGGLGLNLT-AADYVLHMDPWWNPAIEDQASDR-----AHRIGQTRPVTVY 1350 Query: 169 YLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 L+++N+I+E +++ + K + LL Sbjct: 1351 RLVSKNSIEEKIVKLHQEKRDLAGSLLEG 1379 >gi|307708395|ref|ZP_07644861.1| Snf2 family protein [Streptococcus mitis NCTC 12261] gi|307615494|gb|EFN94701.1| Snf2 family protein [Streptococcus mitis NCTC 12261] Length = 804 Score = 133 bits (336), Expect = 1e-29, Method: Composition-based stats. Identities = 36/208 (17%), Positives = 79/208 (37%), Gaps = 23/208 (11%) Query: 9 RELYCDLQGENI--EAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVII--E 64 R+ + + S ++ Q+ + + E+ + K+ +L ++ Sbjct: 588 RDRLAQVSDQEFQRSRVEILSGLMRLRQICDTPALFMED---YQGASGKLDSLRDLLLQV 644 Query: 65 KANAAPIIVAYHFNSDLARLQKAFPQ---------GRTLDKDPCTI-QEWNEGKIPLLFA 114 +++ F L ++++ P G T K+ + + +N+G+ Sbjct: 645 ADGGHRVLIFSQFKGMLEKIEQELPDLGLTSFKITGSTPAKERQDMTKAFNQGERDAFLI 704 Query: 115 HPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQN 174 + G GLNL G + ++ LWW+ Q I R + G + V VY L+ + Sbjct: 705 SLKAGGVGLNLT-GADTVILVDLWWNPAVEAQAIGR-----AHRIGQEETVEVYRLVTRG 758 Query: 175 TIDELVLQRLRTKSTIQDLLLNALKKET 202 TI+E + + K + +L+ + Sbjct: 759 TIEEKIQELQEQKKHLVSQVLDGTESRG 786 >gi|326803590|ref|YP_004321408.1| SNF2 family N-terminal domain protein [Aerococcus urinae ACS-120-V-Col10a] gi|326650654|gb|AEA00837.1| SNF2 family N-terminal domain protein [Aerococcus urinae ACS-120-V-Col10a] Length = 970 Score = 133 bits (336), Expect = 1e-29, Method: Composition-based stats. Identities = 42/211 (19%), Positives = 83/211 (39%), Gaps = 25/211 (11%) Query: 2 KQYHKFQRELYCDLQGENIEAFNS----ASKTVKCLQLANGAVYYDEEKHWKEVHDEKIK 57 Y + ++ L+ ++ + + + Q+ + + + K + Sbjct: 745 AVYLAYLEDIRDRLKDNDVNGSHKHMEMLAAITRLRQICCHPALVNSD---YQGTSGKFE 801 Query: 58 ALEVIIEKA--NAAPIIVAYHFNSDLARLQKAFPQ---------GRT-LDKDPCTIQEWN 105 + ++E+A N I+V F S LA +Q Q G+T +K + +N Sbjct: 802 YFKRMLERALSNHRRILVFSQFTSMLAIMQDYLDQEAINYFIIEGKTNKEKRQDQVNRFN 861 Query: 106 EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 +G+ + + G G+NL G + + + LWW+ +Q I R + G + V Sbjct: 862 QGEGSVFLISLRAGGVGINLT-GADTVFLYDLWWNPSVEEQAIGR-----AHRIGQTKDV 915 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 VY I + TI+E + + K + D L Sbjct: 916 EVYRFITEGTIEERIAELQEEKRHLFDELFQ 946 >gi|260907213|ref|ZP_05915535.1| DNA/RNA helicase, superfamily II, SNF2 family protein [Brevibacterium linens BL2] Length = 1132 Score = 133 bits (336), Expect = 1e-29, Method: Composition-based stats. Identities = 43/204 (21%), Positives = 85/204 (41%), Gaps = 23/204 (11%) Query: 6 KFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKAL----EV 61 + +R+ L + + +++ L++ Y +EK ++ + K+ AL + Sbjct: 919 QKERKKLLGLINDMDRNRFAIFRSLTLLRMLAIDPYLIDEK-YEAIGSSKLSALFSHLDD 977 Query: 62 IIEKANAAPIIVAYHFNSDLAR---------LQKAFPQGRTLDKDPCTIQEWNEGKIPLL 112 II A I+ F S L+R + + G T ++ I ++ G+ P+ Sbjct: 978 II--AEGHRTIIFSQFTSFLSRVGEQLDHRNINYCYLDGSTRNR-GAVIDDFRAGEAPIF 1034 Query: 113 FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIA 172 + G GL L + + WW+ Q ++R + G + V VY +++ Sbjct: 1035 LISLKAGGFGLTLTE-ADYVFLLDPWWNPAVEAQAVDR-----AHRIGQTKNVMVYRMVS 1088 Query: 173 QNTIDELVLQRLRTKSTIQDLLLN 196 + TI+E VL K+ + D L+N Sbjct: 1089 EKTIEEKVLALQERKAQLFDSLVN 1112 >gi|326381641|ref|ZP_08203335.1| SNF2-like protein [Gordonia neofelifaecis NRRL B-59395] gi|326199888|gb|EGD57068.1| SNF2-like protein [Gordonia neofelifaecis NRRL B-59395] Length = 1154 Score = 133 bits (336), Expect = 1e-29, Method: Composition-based stats. Identities = 45/213 (21%), Positives = 80/213 (37%), Gaps = 28/213 (13%) Query: 2 KQYHKF----QRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIK 57 K Y + +++L L+ + + QL+ V D E V+ KI+ Sbjct: 933 KVYDTYLARDRQQLLGLLENFDGNRIQVLRALTRLRQLSLHPVLVDGEH--ANVNSAKIE 990 Query: 58 ALEV----IIEKANAAPIIVAYHFNSDLARLQKAFP---------QGRT-LDKDPCTIQE 103 L +I++ +V F L + G T + K I++ Sbjct: 991 YLSEQLPMLIDE--GHSALVFSSFTGFLKLIAGRLDAEDIPYSYLDGSTAITKRAKQIEQ 1048 Query: 104 WNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKR 163 + +G+ + + G GLNL + WW+ Q ++R + G R Sbjct: 1049 FTDGRTRVFLISLKAGGFGLNLT-AADYCFMTDPWWNPAAEAQAVDR-----AHRIGQHR 1102 Query: 164 AVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 AV VY +++ TI+E V+ K + D LL+ Sbjct: 1103 AVTVYRMVSTGTIEEKVIDLQTRKRELFDALLD 1135 >gi|323487763|ref|ZP_08093021.1| non-specific serine/threonine protein kinase [Planococcus donghaensis MPA1U2] gi|323398497|gb|EGA91285.1| non-specific serine/threonine protein kinase [Planococcus donghaensis MPA1U2] Length = 1047 Score = 133 bits (336), Expect = 1e-29, Method: Composition-based stats. Identities = 42/212 (19%), Positives = 84/212 (39%), Gaps = 27/212 (12%) Query: 2 KQYH----KFQRELYCDLQGENIEA--FNSASKTVKCLQLANGAVYYDEEKHWKEVHDEK 55 K Y + +++ + L ++ + + + QL + E + K Sbjct: 824 KLYAAYLAELKQDAFKHLNKDSFQKNRIRILAGLTRLRQLCCHPALFVEG---YDGGSAK 880 Query: 56 IKALEVIIEK--ANAAPIIVAYHFNSDLARL---------QKAFPQGRTLDKDPCTI-QE 103 L ++ + A ++V F L + + G+T ++ + + Sbjct: 881 FDQLMELLTECRATGRRVLVFSQFTQMLGIIGNQLAKEGVPYFYLDGQTPPQERVELCRR 940 Query: 104 WNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKR 163 +NEG+ L + G GLNL G + +V + LWW+ QQ +R + G ++ Sbjct: 941 FNEGQGELFLISLKAGGTGLNLT-GADTVVLYDLWWNPAVEQQAADR-----AHRMGQEK 994 Query: 164 AVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 V V LIA+ TI+E + + K + D ++ Sbjct: 995 EVQVVRLIAKGTIEEKINELQMKKKNLIDDVI 1026 >gi|108762463|ref|YP_629793.1| SNF2/helicase domain-containing protein [Myxococcus xanthus DK 1622] gi|108466343|gb|ABF91528.1| SNF2/helicase domain protein [Myxococcus xanthus DK 1622] Length = 1208 Score = 133 bits (336), Expect = 1e-29, Method: Composition-based stats. Identities = 33/160 (20%), Positives = 61/160 (38%), Gaps = 18/160 (11%) Query: 50 EVHDEKIKALEVIIEK--ANAAPIIVAYHFNS---------DLARLQKAFPQGRT-LDKD 97 ++ K++ ++ + A +V F S D + + G+T Sbjct: 1022 KLESAKLERFMELVRELRAEGHRALVFSQFTSHLALVREVLDAEGIDYEYLDGQTPAGAR 1081 Query: 98 PCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 ++ + EG +PL + G GLNL ++ WW+ Q +R Sbjct: 1082 AERVRAFQEGDVPLFLISLKAGGFGLNLT-AATTVIHLDPWWNPAVEDQASDR-----AH 1135 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + G +R V VY L+ + TI+E +L K + +L Sbjct: 1136 RIGQERPVTVYRLVTRGTIEEQMLSLHEHKRALVAGVLEG 1175 >gi|329922954|ref|ZP_08278470.1| SNF2 family N-terminal domain protein [Paenibacillus sp. HGF5] gi|328941727|gb|EGG38012.1| SNF2 family N-terminal domain protein [Paenibacillus sp. HGF5] Length = 1111 Score = 133 bits (336), Expect = 1e-29, Method: Composition-based stats. Identities = 36/183 (19%), Positives = 75/183 (40%), Gaps = 21/183 (11%) Query: 26 ASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLAR 83 + + Q+ + + E K++ L IE+ ++V F L Sbjct: 916 LAGITRLRQICCHPALFVDG---YEGGSAKLEQLLETIEECRLAGRRMLVFSQFTGMLNL 972 Query: 84 LQKA---------FPQGRTLDKDPCTI-QEWNEGKIPLLFAHPASCGHGLNLQYGGNILV 133 + + G+T + + + +NEG+ + + G GLNL G + ++ Sbjct: 973 IAGELGYRGIPFFYLDGQTPGSERVELCERFNEGEREVFLISLKAGGTGLNLT-GADTVI 1031 Query: 134 FFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDL 193 + LWW+ QQ ++R + G K+ V V +AQ+TI++ ++ + K + + Sbjct: 1032 LYDLWWNPAVEQQAMDR-----AHRIGQKKVVQVIRFVAQDTIEDKMVALQQKKKDLIEE 1086 Query: 194 LLN 196 L+ Sbjct: 1087 LVQ 1089 >gi|168491585|ref|ZP_02715728.1| Snf2 family protein [Streptococcus pneumoniae CDC0288-04] gi|183574164|gb|EDT94692.1| Snf2 family protein [Streptococcus pneumoniae CDC0288-04] Length = 1032 Score = 133 bits (336), Expect = 1e-29, Method: Composition-based stats. Identities = 36/208 (17%), Positives = 79/208 (37%), Gaps = 23/208 (11%) Query: 9 RELYCDLQGENI--EAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIE-- 64 R+ + + S ++ Q+ + + E+ + K+ +L ++ Sbjct: 816 RDHLAQVSEQEFQRSRVEILSGLMRLRQICDTPALFMED---YQGASGKLDSLRDLLVQV 872 Query: 65 KANAAPIIVAYHFNSDLARLQKAFPQ---------GRTLDKDPCTI-QEWNEGKIPLLFA 114 +++ F L ++++ P G T K+ + + +N+G+ Sbjct: 873 ADGGHRVLIFSQFKGMLEKIEQELPDLGLTSFKITGSTPAKERQDMTEAFNQGERDAFLI 932 Query: 115 HPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQN 174 + G GLNL G + ++ LWW+ Q I R + G + V VY L+ + Sbjct: 933 SLKAGGVGLNLT-GADTVILVDLWWNPAVEAQAIGR-----AHRMGQEETVEVYRLVTKG 986 Query: 175 TIDELVLQRLRTKSTIQDLLLNALKKET 202 TI+E + + K + +L+ + Sbjct: 987 TIEEKIQELQEQKKHLVSQVLDGTESRG 1014 >gi|297190045|ref|ZP_06907443.1| helicase [Streptomyces pristinaespiralis ATCC 25486] gi|297150349|gb|EFH30576.1| helicase [Streptomyces pristinaespiralis ATCC 25486] Length = 700 Score = 133 bits (336), Expect = 1e-29, Method: Composition-based stats. Identities = 42/213 (19%), Positives = 80/213 (37%), Gaps = 21/213 (9%) Query: 3 QYHKFQRELYCDLQGENIEAFNSAS--KTVKCLQLANG-AVYYDEEKHWKEVHDEKIKAL 59 Y RE + Q+ N A Y EE+ E K++ L Sbjct: 473 LYEAVVRETLAAISEAGGMERRGLVVKLLTALKQICNHPAQYLKEERPRVEGRSGKLELL 532 Query: 60 EVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQ----------GRTLDKDPCTIQEWNEG 107 + +++ + A ++V + L+ + G + + + + G Sbjct: 533 DELLDTILSEDASVLVFTQYVQMARLLEGHLARRGVRTQFLHGGTPVPEREAMVNRFQNG 592 Query: 108 KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFV 167 ++P+ + G GLNL + +V + WW+ Q +R + G R V V Sbjct: 593 EVPVFLLSLKAAGTGLNLTRAEH-VVHYDRWWNPAVEAQATDR-----AYRIGQDRPVQV 646 Query: 168 YYLIAQNTIDELVLQRLRTKSTIQDLLLNALKK 200 + LIA+ TI++ + + L K + D +L A + Sbjct: 647 HRLIAEGTIEDRIARMLERKKDLADSVLGAGEA 679 >gi|293401290|ref|ZP_06645434.1| HepA/SNF2 family protein [Erysipelotrichaceae bacterium 5_2_54FAA] gi|291305416|gb|EFE46661.1| HepA/SNF2 family protein [Erysipelotrichaceae bacterium 5_2_54FAA] Length = 1075 Score = 133 bits (336), Expect = 1e-29, Method: Composition-based stats. Identities = 38/182 (20%), Positives = 68/182 (37%), Gaps = 21/182 (11%) Query: 26 ASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIE--KANAAPIIVAYHFNSDLAR 83 S + QL E + KI A IE +A+ +++ F S L+ Sbjct: 884 LSMLTRLRQLCCDPRLLYEN---YQGVGNKINACMEFIENCRASGKKVLLFSQFTSLLSL 940 Query: 84 LQKAFPQGRT----------LDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILV 133 ++K Q + + +N P+ + G GLNL +++ Sbjct: 941 IEKELKQREIDYYLLKGSTPKVQRQQYVNAFNVDATPVFLISLKAGGTGLNLT-SAEVVI 999 Query: 134 FFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDL 193 F WW++ Q +R + G V V LIA++TI+E ++ K + D Sbjct: 1000 HFDPWWNVSAQNQATDR-----AYRIGQHNNVQVVKLIAKDTIEEKIMHLQELKQDLSDS 1054 Query: 194 LL 195 ++ Sbjct: 1055 II 1056 >gi|325685916|gb|EGD27981.1| non-specific serine/threonine protein kinase [Lactobacillus delbrueckii subsp. lactis DSM 20072] Length = 1185 Score = 133 bits (335), Expect = 1e-29, Method: Composition-based stats. Identities = 42/217 (19%), Positives = 84/217 (38%), Gaps = 32/217 (14%) Query: 2 KQYH----KFQRELYCDLQGE-NIEAFNSASKTVKCLQLAN--GAVYYDEEKHWKEVHDE 54 K Y + + ++ + E + + ++ G +Y D + E Sbjct: 962 KLYDAEIARLKNKVMAEDDEGIKREQIEILAALTRIREICCDPGLLYEDYKGE-----SE 1016 Query: 55 KIKALEVIIEKA--NAAPIIVAYHFNSDLARLQKAFP---------QGRTLD-KDPCTIQ 102 K A +I+ A +++ F S L L+++ G+T + + Sbjct: 1017 KRLACVDLIKSAIDGGHKVLLFSQFTSMLDLLEESLKAEEIGFLRIDGQTPKARRLTLVN 1076 Query: 103 EWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 +N P + + G GLNL G + ++ + WW++ Q +R + G Sbjct: 1077 VFNHKDSPAKVFLISLKAGGTGLNLT-GADTVIHYDPWWNVAAQNQATDR-----AHRIG 1130 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 ++ V VY LIA++T++E +L K + +L A Sbjct: 1131 QEKKVTVYKLIAKDTVEEAILDLQEAKRQLAQGILTA 1167 >gi|295695581|ref|YP_003588819.1| SNF2-related protein [Bacillus tusciae DSM 2912] gi|295411183|gb|ADG05675.1| SNF2-related protein [Bacillus tusciae DSM 2912] Length = 1189 Score = 133 bits (335), Expect = 1e-29, Method: Composition-based stats. Identities = 42/205 (20%), Positives = 77/205 (37%), Gaps = 19/205 (9%) Query: 6 KFQRELYCDLQGENIEAFNSASKTVKCLQL-ANGAVYYDEEKHWKEVHDEKIKALEVIIE 64 + + + G + + Q+ A+ A+ E + ++ L Sbjct: 966 QLRAQQLMQKGGLTENRIAILALITRLRQVCADPALVVPEYDGSSAKLEALLELLRDY-- 1023 Query: 65 KANAAPIIVAYHFNSDLARLQKAFPQ---------GRTLDKDPCTIQE-WNEGKIPLLFA 114 + +V F L R++ Q GRT KD + + +N G+ + Sbjct: 1024 RVAGRRALVFSQFTQMLERIRGRLAQEGIEAFYLDGRTPPKDRLAMADAFNAGERGVFLI 1083 Query: 115 HPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQN 174 + G GLNL G + ++ + LWW+ Q I R + G K V V +IA+ Sbjct: 1084 SLRAGGTGLNLT-GADTVILYDLWWNPAVDAQAIGR-----AHRIGQKNPVLVLRVIAKG 1137 Query: 175 TIDELVLQRLRTKSTIQDLLLNALK 199 TI+E + K + D ++ + K Sbjct: 1138 TIEERMYALQMKKQALFDRVIESEK 1162 >gi|29828134|ref|NP_822768.1| SNF2/RAD54 family helicase [Streptomyces avermitilis MA-4680] gi|29605236|dbj|BAC69303.1| putative SNF2/RAD54 family helicase [Streptomyces avermitilis MA-4680] Length = 979 Score = 133 bits (335), Expect = 1e-29, Method: Composition-based stats. Identities = 42/208 (20%), Positives = 81/208 (38%), Gaps = 21/208 (10%) Query: 3 QYHKFQRELYCDLQGENIEAFNSA--SKTVKCLQLANG-AVYYDEEKHWKEVHDEKIKAL 59 Y RE ++ G + A Q+ N A + EE+ K++ L Sbjct: 752 LYEAVVRETLAEISGADSMARRGLIVKLLTGLKQICNHPAQFLKEERPNIAGRSGKLELL 811 Query: 60 EVIIEK--ANAAPIIVAYHFNSDLARLQKAFP----------QGRTLDKDPCTIQEWNEG 107 + +++ + A ++V + L++ G + + + + EG Sbjct: 812 DELLDTILSEGAGVLVFTQYVRMARLLERHLAARGVPSQFLHGGTPVHEREAMVHRFQEG 871 Query: 108 KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFV 167 ++P+ + G GLNL + +V + WW+ Q +R + G R V V Sbjct: 872 EVPVFLLSLKAAGTGLNLTRAEH-VVHYDRWWNPAVEAQATDR-----AYRIGQTRPVQV 925 Query: 168 YYLIAQNTIDELVLQRLRTKSTIQDLLL 195 + LIA+ TI++ + L K + D +L Sbjct: 926 HRLIAEGTIEDRIADMLLRKRELADAVL 953 >gi|168488816|ref|ZP_02713015.1| Snf2 family protein [Streptococcus pneumoniae SP195] gi|183572774|gb|EDT93302.1| Snf2 family protein [Streptococcus pneumoniae SP195] Length = 1032 Score = 133 bits (335), Expect = 1e-29, Method: Composition-based stats. Identities = 36/208 (17%), Positives = 79/208 (37%), Gaps = 23/208 (11%) Query: 9 RELYCDLQGENI--EAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIE-- 64 R+ + + S ++ Q+ + + E+ + K+ +L ++ Sbjct: 816 RDHLAQVSEQEFQRSRVEILSGLMRLRQICDTPALFMED---YQGASGKLDSLRDLLVQV 872 Query: 65 KANAAPIIVAYHFNSDLARLQKAFPQ---------GRTLDKDPCTI-QEWNEGKIPLLFA 114 +++ F L ++++ P G T K+ + + +N+G+ Sbjct: 873 ADGGHRVLIFSQFKGMLEKIEQELPDLGLTSFKITGSTPAKERQDMTKAFNQGERDAFLI 932 Query: 115 HPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQN 174 + G GLNL G + ++ LWW+ Q I R + G + V VY L+ + Sbjct: 933 SLKAGGVGLNLT-GADTVILVDLWWNPAVEAQAIGR-----AHRMGQEETVEVYRLVTKG 986 Query: 175 TIDELVLQRLRTKSTIQDLLLNALKKET 202 TI+E + + K + +L+ + Sbjct: 987 TIEEKIQELQEQKKHLVSQVLDGTESRG 1014 >gi|307706218|ref|ZP_07643035.1| bacterial SNF2 helicase associated family protein [Streptococcus mitis SK321] gi|307618408|gb|EFN97558.1| bacterial SNF2 helicase associated family protein [Streptococcus mitis SK321] Length = 1032 Score = 133 bits (335), Expect = 1e-29, Method: Composition-based stats. Identities = 36/208 (17%), Positives = 79/208 (37%), Gaps = 23/208 (11%) Query: 9 RELYCDLQGENI--EAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIE-- 64 R+ + + S ++ Q+ + + E+ + K+ +L ++ Sbjct: 816 RDRLAQVSDQEFQRSRVEILSGLMRLRQICDTPALFMED---YQGASGKLDSLRDLLVQV 872 Query: 65 KANAAPIIVAYHFNSDLARLQKAFPQ---------GRTLDKDPCTI-QEWNEGKIPLLFA 114 +++ F L ++++ P G T K+ + + +N+G+ Sbjct: 873 ADGGHRVLIFSQFKGMLEKIEQELPDLGLTSFKITGSTPAKERQDMTKAFNQGERDAFLI 932 Query: 115 HPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQN 174 + G GLNL G + ++ LWW+ Q I R + G + V VY L+ + Sbjct: 933 SLKAGGVGLNLT-GADTVILVDLWWNPAVEAQAIGR-----AHRMGQEETVEVYRLVTKG 986 Query: 175 TIDELVLQRLRTKSTIQDLLLNALKKET 202 TI+E + + K + +L+ + Sbjct: 987 TIEEKIQELQEQKKHLVSQVLDGTESRG 1014 >gi|322419843|ref|YP_004199066.1| SNF2-like protein [Geobacter sp. M18] gi|320126230|gb|ADW13790.1| SNF2-related protein [Geobacter sp. M18] Length = 1385 Score = 133 bits (335), Expect = 1e-29, Method: Composition-based stats. Identities = 37/212 (17%), Positives = 76/212 (35%), Gaps = 27/212 (12%) Query: 3 QYHKFQRELYCDLQG-ENIEAFNSA-----SKTVKCLQLANGAVYYDEEKHWKEVHDEKI 56 Y ++ +L G +E ++ ++ + + + K+ Sbjct: 1162 LYQAIRKSALDNLAGIGKVEGKGELHLKILAEIMRLRRACCNPRLVLPD---SAIASAKL 1218 Query: 57 KALEVIIEKA--NAAPIIVAYHFNSDLARLQKAFPQGRT----LDKDPCTIQE------W 104 A I+E+ N +V F L +++ + LD ++ + Sbjct: 1219 AAFAEIVEELRENRHKALVFSQFVGHLEIIREHVERAGIPYQYLDGSTPAVERKRRVDAF 1278 Query: 105 NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA 164 G+ L + G GLNL + ++ WW+ Q +R + G +R Sbjct: 1279 QSGEGDLFLISLKAGGVGLNLT-AADYVIHMDPWWNPAVEDQASDR-----AHRIGQQRP 1332 Query: 165 VFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 V +Y L+ + TI+E ++ + K + D LL Sbjct: 1333 VTIYRLVTKGTIEEKIVGLHQQKRGLADSLLE 1364 >gi|15901369|ref|NP_345973.1| Snf2 family protein [Streptococcus pneumoniae TIGR4] gi|111658366|ref|ZP_01409053.1| hypothetical protein SpneT_02000445 [Streptococcus pneumoniae TIGR4] gi|14973013|gb|AAK75613.1| Snf2 family protein [Streptococcus pneumoniae TIGR4] Length = 1032 Score = 133 bits (335), Expect = 1e-29, Method: Composition-based stats. Identities = 36/208 (17%), Positives = 79/208 (37%), Gaps = 23/208 (11%) Query: 9 RELYCDLQGENI--EAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIE-- 64 R+ + + S ++ Q+ + + E+ + K+ +L ++ Sbjct: 816 RDHLAQVSEQEFQRSRVEILSGLMRLRQICDTPALFMED---YQGASGKLDSLRDLLVQV 872 Query: 65 KANAAPIIVAYHFNSDLARLQKAFPQ---------GRTLDKDPCTI-QEWNEGKIPLLFA 114 +++ F L ++++ P G T K+ + + +N+G+ Sbjct: 873 ADGGHRVLIFSQFKGMLEKIEQELPDLGLTSFKITGSTPAKERQDMTKAFNQGERDAFLI 932 Query: 115 HPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQN 174 + G GLNL G + ++ LWW+ Q I R + G + V VY L+ + Sbjct: 933 SLKAGGVGLNLT-GADTVILVDLWWNPAVEAQAIGR-----AHRMGQEETVEVYRLVTKG 986 Query: 175 TIDELVLQRLRTKSTIQDLLLNALKKET 202 TI+E + + K + +L+ + Sbjct: 987 TIEEKIQELQEQKKHLVSQVLDGTESRG 1014 >gi|312196824|ref|YP_004016885.1| SNF2-related protein [Frankia sp. EuI1c] gi|311228160|gb|ADP81015.1| SNF2-related protein [Frankia sp. EuI1c] Length = 1282 Score = 133 bits (335), Expect = 1e-29, Method: Composition-based stats. Identities = 43/210 (20%), Positives = 78/210 (37%), Gaps = 24/210 (11%) Query: 2 KQYH---KFQRELYCDLQGE-NIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIK 57 + Y + +R+ L + N QL+ A D+ + + KI Sbjct: 1063 RLYQTQLQRERQKVLGLVNDLNRNRLTILRSLTLLRQLSLHAGLVDDGQ--ARLPSAKID 1120 Query: 58 ALEVIIEK--ANAAPIIVAYHFNSDL---------ARLQKAFPQGRTLDKDPCTIQEWNE 106 L + A +V F L A ++ + GRT D+ ++ + Sbjct: 1121 TLLEQLTHVVAGGHRALVFSQFTGFLGKVRAELGDAGVEYCYLDGRTRDR-ADVVERFRS 1179 Query: 107 GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVF 166 GK + + G GLNL + WW+ Q ++R + G R V Sbjct: 1180 GKASVFLISLKAGGFGLNLTE-ADYCFLLDPWWNPATEAQAVDR-----THRIGQTRNVL 1233 Query: 167 VYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 VY L+A++TI+E V+ K+ + +++ Sbjct: 1234 VYRLVARDTIEEKVMALKARKARLFSGVID 1263 >gi|315604148|ref|ZP_07879214.1| conserved hypothetical protein [Actinomyces sp. oral taxon 180 str. F0310] gi|315313854|gb|EFU61905.1| conserved hypothetical protein [Actinomyces sp. oral taxon 180 str. F0310] Length = 1045 Score = 133 bits (335), Expect = 1e-29, Method: Composition-based stats. Identities = 48/211 (22%), Positives = 82/211 (38%), Gaps = 24/211 (11%) Query: 2 KQYHK---FQRELYCDLQGE-NIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIK 57 + Y + R DL + + + S + QLA D + V KI+ Sbjct: 827 RIYDQHLARVRARILDLLADVDANRMSVLSSLTRLRQLALDPALVD--GAYSRVGSAKIE 884 Query: 58 ALEVIIEKA--NAAPIIVAYHFNSDLARLQKAFP---------QGRTLDKDPCTIQEWNE 106 L +++ +V F S LAR++ A G T D+D I+E+ Sbjct: 885 YLADHLDEIVPLGHQALVFSQFTSFLARIRGALERRGIAVVQLDGSTRDRDR-VIEEFRS 943 Query: 107 GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVF 166 G+ + + G GL L + V WW+ +Q I+R + G + V Sbjct: 944 GQAQVFLISLKAGGAGLTLTEADYVYVM-DPWWNPAAEEQAIDR-----AHRIGQTKKVN 997 Query: 167 VYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 VY L+A +TI+ V++ K + ++N Sbjct: 998 VYRLVAADTIEAKVVELQDRKRRLISSVMNG 1028 >gi|150017526|ref|YP_001309780.1| non-specific serine/threonine protein kinase [Clostridium beijerinckii NCIMB 8052] gi|149903991|gb|ABR34824.1| Non-specific serine/threonine protein kinase [Clostridium beijerinckii NCIMB 8052] Length = 1057 Score = 133 bits (335), Expect = 1e-29, Method: Composition-based stats. Identities = 44/211 (20%), Positives = 83/211 (39%), Gaps = 24/211 (11%) Query: 2 KQYHKFQRELYCDLQGE--NIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKAL 59 K Y + +++ ++ E + S K QL ++ K++ Sbjct: 835 KVYASYVKDIKEKMEAENFERDKITIFSYLTKLRQLCLDPSIVVDKYT---GGSAKLEEA 891 Query: 60 EVIIEK--ANAAPIIVAYHFNSDLA---------RLQKAFPQGRTL-DKDPCTIQEWN-E 106 +IE AN I++ F S L +++ + G T K + E+N Sbjct: 892 LNLIEDNIANGHKILLFSQFTSVLNNISKELSENKIEHMYLDGSTKATKRSELVDEFNGS 951 Query: 107 GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVF 166 K + + G GLNL +I++ F WW+ Q +R + G K V Sbjct: 952 DKYKVFLISLKAGGTGLNLT-SADIIIHFDPWWNPAVEDQATDR-----AHRIGQKNVVQ 1005 Query: 167 VYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 V+ LI++ TI+E ++ +K + + +L + Sbjct: 1006 VFKLISEGTIEERIINLQESKKELINGILES 1036 >gi|332073859|gb|EGI84337.1| helicase conserved C-terminal domain protein [Streptococcus pneumoniae GA41301] Length = 1032 Score = 133 bits (335), Expect = 1e-29, Method: Composition-based stats. Identities = 36/208 (17%), Positives = 79/208 (37%), Gaps = 23/208 (11%) Query: 9 RELYCDLQGENI--EAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIE-- 64 R+ + + S ++ Q+ + + E+ + K+ +L ++ Sbjct: 816 RDHLAQVSEQEFQRSRVEILSGLMRLRQICDTPALFMED---YQGASGKLDSLRDLLVQV 872 Query: 65 KANAAPIIVAYHFNSDLARLQKAFPQ---------GRTLDKDPCTI-QEWNEGKIPLLFA 114 +++ F L ++++ P G T K+ + + +N+G+ Sbjct: 873 ADGGHRVLIFSQFKGMLEKIEQELPDLGLTSFKITGSTPAKERQDMTKAFNQGERDAFLI 932 Query: 115 HPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQN 174 + G GLNL G + ++ LWW+ Q I R + G + V VY L+ + Sbjct: 933 SLKAGGVGLNLT-GADTVILVDLWWNPAVEAQAIGR-----AHRMGQEETVEVYRLVTKG 986 Query: 175 TIDELVLQRLRTKSTIQDLLLNALKKET 202 TI+E + + K + +L+ + Sbjct: 987 TIEEKIQELQEQKKHLVSQVLDGTESRG 1014 >gi|301794535|emb|CBW36977.1| putative SNF-family helicase [Streptococcus pneumoniae INV104] Length = 1032 Score = 133 bits (335), Expect = 1e-29, Method: Composition-based stats. Identities = 36/208 (17%), Positives = 79/208 (37%), Gaps = 23/208 (11%) Query: 9 RELYCDLQGENI--EAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIE-- 64 R+ + + S ++ Q+ + + E+ + K+ +L ++ Sbjct: 816 RDHLAQVSEQEFQRSRVEILSGLMRLRQICDTPALFMED---YQGASGKLDSLRDLLVQV 872 Query: 65 KANAAPIIVAYHFNSDLARLQKAFPQ---------GRTLDKDPCTI-QEWNEGKIPLLFA 114 +++ F L ++++ P G T K+ + + +N+G+ Sbjct: 873 ADGGHRVLIFSQFKGMLEKIEQELPDLGLTSFKITGSTPAKERQDMTKAFNQGERDAFLI 932 Query: 115 HPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQN 174 + G GLNL G + ++ LWW+ Q I R + G + V VY L+ + Sbjct: 933 SLKAGGVGLNLT-GADTVILVDLWWNPAVEAQAIGR-----AHRMGQEETVEVYRLVTKG 986 Query: 175 TIDELVLQRLRTKSTIQDLLLNALKKET 202 TI+E + + K + +L+ + Sbjct: 987 TIEEKIQELQEQKKHLVSQVLDGTESRG 1014 >gi|260888903|ref|ZP_05900166.1| superfamily II DNA/RNA helicase, SNF2 family [Leptotrichia hofstadii F0254] gi|260861350|gb|EEX75850.1| superfamily II DNA/RNA helicase, SNF2 family [Leptotrichia hofstadii F0254] Length = 1119 Score = 133 bits (335), Expect = 1e-29, Method: Composition-based stats. Identities = 43/208 (20%), Positives = 86/208 (41%), Gaps = 22/208 (10%) Query: 1 MKQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 M + ++EL + E + K Q+ N +DE + KIK L+ Sbjct: 907 MAYVKQAKKELR-EFDKEENNNLKVLAILTKLRQICNSPQLFDENYKGEV---AKIKLLK 962 Query: 61 VIIEK--ANAAPIIVAYHF---------NSDLARLQKAFPQGRTLDKDPCTI-QEWNEGK 108 ++ N +++ F + ++ F G K+ I +++N G+ Sbjct: 963 ELMPDILENNHRMLIFSQFLGTLEEIKIELEKEEVKYFFIDGSVKSKERMEISKKFNSGE 1022 Query: 109 IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVY 168 ++ + G GLNL G ++++ + WW+ Q +R + G K++V V Sbjct: 1023 GQVVLISLKAGGTGLNL-VGADVVIHYDPWWNFAVENQASDR-----AHRIGQKKSVQVI 1076 Query: 169 YLIAQNTIDELVLQRLRTKSTIQDLLLN 196 LI + TI+E +++ K T+ + +L Sbjct: 1077 KLITEGTIEEKIIKLQEKKRTLSENILE 1104 >gi|306824889|ref|ZP_07458233.1| Snf2 family protein [Streptococcus sp. oral taxon 071 str. 73H25AP] gi|304433100|gb|EFM36072.1| Snf2 family protein [Streptococcus sp. oral taxon 071 str. 73H25AP] Length = 1031 Score = 133 bits (335), Expect = 1e-29, Method: Composition-based stats. Identities = 37/208 (17%), Positives = 80/208 (38%), Gaps = 23/208 (11%) Query: 9 RELYCDLQGENI--EAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVII--E 64 R+ + + S ++ Q+ + + + + K+ +L ++ Sbjct: 815 RDRLAQVTDQEFQRSRVEILSGLMRLRQICDTPALFMDN---YQGASGKLDSLRDLLLQV 871 Query: 65 KANAAPIIVAYHFNSDLARLQKAFP---------QGRTLDKDPCTIQE-WNEGKIPLLFA 114 +++ F L ++++ P G T +D + + +N+G+ + Sbjct: 872 ADGGHRVLIFSQFKGMLEKIEQELPNLGLTSFKITGSTPAQDRQEMTKIFNQGERDIFLI 931 Query: 115 HPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQN 174 + G GLNL G + ++ LWW+ Q I R + G +R V VY LI + Sbjct: 932 SLKAGGVGLNLT-GADTVILVDLWWNPAVEAQAIGR-----AHRMGQERKVEVYRLITRG 985 Query: 175 TIDELVLQRLRTKSTIQDLLLNALKKET 202 TI+E + + K + +L+ + Sbjct: 986 TIEEKIQELQEQKKHLISQVLDGTESRA 1013 >gi|148992589|ref|ZP_01822257.1| Snf2 family protein [Streptococcus pneumoniae SP9-BS68] gi|168484940|ref|ZP_02709885.1| Snf2 family protein [Streptococcus pneumoniae CDC1873-00] gi|147928606|gb|EDK79620.1| Snf2 family protein [Streptococcus pneumoniae SP9-BS68] gi|172041922|gb|EDT49968.1| Snf2 family protein [Streptococcus pneumoniae CDC1873-00] gi|332072316|gb|EGI82799.1| helicase conserved C-terminal domain protein [Streptococcus pneumoniae GA17570] Length = 1032 Score = 133 bits (335), Expect = 1e-29, Method: Composition-based stats. Identities = 36/208 (17%), Positives = 79/208 (37%), Gaps = 23/208 (11%) Query: 9 RELYCDLQGENI--EAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIE-- 64 R+ + + S ++ Q+ + + E+ + K+ +L ++ Sbjct: 816 RDHLAQVSEQEFQRSRVEILSGLMRLRQICDTPALFMED---YQGASGKLDSLRDLLVQV 872 Query: 65 KANAAPIIVAYHFNSDLARLQKAFPQ---------GRTLDKDPCTI-QEWNEGKIPLLFA 114 +++ F L ++++ P G T K+ + + +N+G+ Sbjct: 873 ADGGHRVLIFSQFKGMLEKIEQELPDLGLTSFKITGSTPAKERQDMTKAFNQGERDAFLI 932 Query: 115 HPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQN 174 + G GLNL G + ++ LWW+ Q I R + G + V VY L+ + Sbjct: 933 SLKAGGVGLNLT-GADTVILVDLWWNPAVEAQAIGR-----AHRMGQEETVEVYRLVTKG 986 Query: 175 TIDELVLQRLRTKSTIQDLLLNALKKET 202 TI+E + + K + +L+ + Sbjct: 987 TIEEKIQELQEQKKHLVSQVLDGTESRG 1014 >gi|300771853|ref|ZP_07081724.1| Snf2 family protein [Sphingobacterium spiritivorum ATCC 33861] gi|300761239|gb|EFK58064.1| Snf2 family protein [Sphingobacterium spiritivorum ATCC 33861] Length = 1119 Score = 133 bits (335), Expect = 1e-29, Method: Composition-based stats. Identities = 47/205 (22%), Positives = 78/205 (38%), Gaps = 18/205 (8%) Query: 3 QYHKFQRELYCDLQGENIEAFNSASK--TVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 Y K RE +G+ I K Q+ N E E + KI+ L Sbjct: 900 LYEKEFREFISATEGDEIRKSPMYVLKGLTKLRQICNSTKLLKTEDLSTEDNSAKIETLI 959 Query: 61 VIIEKANA-APIIVAYHFNSDLARLQKA---------FPQGRTLDKDPCTIQEWNEGKIP 110 IE A IIV F S L +QKA G+T ++D + Sbjct: 960 EQIEDNIAYHKIIVFSQFVSMLQLIQKALSAKGIDASMLTGKTKNRDQVVHNFQQQEDNR 1019 Query: 111 LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYL 170 + + G GLNL +++ WW+ Q I+R + G ++ V L Sbjct: 1020 VFLISLKAGGTGLNLT-AASLVYLVDPWWNPAVENQAIDR-----AYRIGQQQTVTAVRL 1073 Query: 171 IAQNTIDELVLQRLRTKSTIQDLLL 195 I +T++E +++ ++K+ + L+ Sbjct: 1074 ITPDTVEEKMIKMQQSKNELASALI 1098 >gi|313124061|ref|YP_004034320.1| DNA/RNA helicase, superfamily ii, snf2 family protein [Lactobacillus delbrueckii subsp. bulgaricus ND02] gi|312280624|gb|ADQ61343.1| DNA/RNA helicase, superfamily II, SNF2 family protein [Lactobacillus delbrueckii subsp. bulgaricus ND02] Length = 1185 Score = 133 bits (335), Expect = 1e-29, Method: Composition-based stats. Identities = 41/217 (18%), Positives = 82/217 (37%), Gaps = 32/217 (14%) Query: 2 KQYH----KFQRELYCDLQGE-NIEAFNSASKTVKCLQLAN--GAVYYDEEKHWKEVHDE 54 K Y + + ++ + E + + ++ G +Y D + E Sbjct: 962 KLYDAEIARLKNKVMAEDDEGIKREQIEILAALTRIREICCDPGLLYEDYKGE-----SE 1016 Query: 55 KIKALEVIIEKA--NAAPIIVAYHFNSDLARLQKAFPQGRT----------LDKDPCTIQ 102 K A +I+ A +++ F S L L+++ + + Sbjct: 1017 KRLACVDLIKSAIDGGHKVLLFSQFTSMLDLLEESLKADEIGFLRIDGQTPKARRLTLVN 1076 Query: 103 EWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 +N P + + G GLNL G + ++ + WW++ Q +R + G Sbjct: 1077 VFNHKDSPAKVFLISLKAGGTGLNLT-GADTVIHYDPWWNVAAQNQATDR-----AHRIG 1130 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 ++ V VY LIA++T++E +L KS + +L A Sbjct: 1131 QEKKVTVYKLIAKDTVEEAILDLQEAKSQLAQGILTA 1167 >gi|301802243|emb|CBW34994.1| putative SNF-family helicase [Streptococcus pneumoniae INV200] Length = 1032 Score = 133 bits (335), Expect = 1e-29, Method: Composition-based stats. Identities = 36/208 (17%), Positives = 79/208 (37%), Gaps = 23/208 (11%) Query: 9 RELYCDLQGENI--EAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIE-- 64 R+ + + S ++ Q+ + + E+ + K+ +L ++ Sbjct: 816 RDHLAQVSEQEFQRSRVEILSGLMRLRQICDTPALFMED---YQGASGKLDSLRDLLVQV 872 Query: 65 KANAAPIIVAYHFNSDLARLQKAFPQ---------GRTLDKDPCTI-QEWNEGKIPLLFA 114 +++ F L ++++ P G T K+ + + +N+G+ Sbjct: 873 ADGGHRVLIFSQFKGMLEKIEQELPDLGLTSFKITGSTPAKERQDMTKAFNQGERDAFLI 932 Query: 115 HPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQN 174 + G GLNL G + ++ LWW+ Q I R + G + V VY L+ + Sbjct: 933 SLKAGGVGLNLT-GADTVILVDLWWNPAVEAQAIGR-----AHRMGQEETVEVYRLVTKG 986 Query: 175 TIDELVLQRLRTKSTIQDLLLNALKKET 202 TI+E + + K + +L+ + Sbjct: 987 TIEEKIQELQEQKKHLVSQVLDGTESRG 1014 >gi|148658072|ref|YP_001278277.1| non-specific serine/threonine protein kinase [Roseiflexus sp. RS-1] gi|148570182|gb|ABQ92327.1| Non-specific serine/threonine protein kinase [Roseiflexus sp. RS-1] Length = 1068 Score = 133 bits (335), Expect = 1e-29, Method: Composition-based stats. Identities = 34/180 (18%), Positives = 69/180 (38%), Gaps = 20/180 (11%) Query: 29 TVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIE--KANAAPIIVAYHFNSDL----- 81 ++ Q+ N + + K + L +E A +V F L Sbjct: 880 LLRLRQICNHPRLIEPD---FRGSSGKFELLIETLETLAAEGRKALVFSQFVQMLTLIRE 936 Query: 82 ----ARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSL 137 R+ A+ G+T + + ++ +P + G GLNL + ++ Sbjct: 937 ALDARRIPYAYLDGQTRQRQQEVDRFQSDETLPFFLISLKAGGVGLNLT-AADYVIHVDP 995 Query: 138 WWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 WW+ Q +R + G ++ VFVY L+ +++++E +L K + + L+ A Sbjct: 996 WWNPAVEMQATDR-----THRIGQEKPVFVYKLVTRDSVEEKILHLQNRKRELVEQLITA 1050 >gi|148984868|ref|ZP_01818121.1| Snf2 family protein [Streptococcus pneumoniae SP3-BS71] gi|147922890|gb|EDK74006.1| Snf2 family protein [Streptococcus pneumoniae SP3-BS71] gi|301800358|emb|CBW32988.1| putative SNF-family helicase [Streptococcus pneumoniae OXC141] Length = 1034 Score = 133 bits (335), Expect = 1e-29, Method: Composition-based stats. Identities = 36/208 (17%), Positives = 79/208 (37%), Gaps = 23/208 (11%) Query: 9 RELYCDLQGENI--EAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIE-- 64 R+ + + S ++ Q+ + + E+ + K+ +L ++ Sbjct: 818 RDHLAQVSEQEFQRSRVEILSGLMRLRQICDTPALFMED---YQGASGKLDSLRDLLVQV 874 Query: 65 KANAAPIIVAYHFNSDLARLQKAFPQ---------GRTLDKDPCTI-QEWNEGKIPLLFA 114 +++ F L ++++ P G T K+ + + +N+G+ Sbjct: 875 ADGGHRVLIFSQFKGMLEKIEQELPDLGLTSFKITGSTPAKERQDMTKAFNQGERDAFLI 934 Query: 115 HPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQN 174 + G GLNL G + ++ LWW+ Q I R + G + V VY L+ + Sbjct: 935 SLKAGGVGLNLT-GADTVILVDLWWNPAVEAQAIGR-----AHRMGQEETVEVYRLVTKG 988 Query: 175 TIDELVLQRLRTKSTIQDLLLNALKKET 202 TI+E + + K + +L+ + Sbjct: 989 TIEEKIQELQEQKKHLVSQVLDGTESRG 1016 >gi|94985591|ref|YP_604955.1| SNF2-related [Deinococcus geothermalis DSM 11300] gi|94555872|gb|ABF45786.1| Superfamily II DNA/RNA helicase, SNF2 family [Deinococcus geothermalis DSM 11300] Length = 1126 Score = 133 bits (335), Expect = 1e-29, Method: Composition-based stats. Identities = 38/182 (20%), Positives = 74/182 (40%), Gaps = 22/182 (12%) Query: 29 TVKCLQLANGAVYYDEEKHWKEVHDEKIK----ALEVIIEKANAAPIIVAYHFNSDLARL 84 +K Q A E + K+ L ++E+ +++ F + L L Sbjct: 924 LLKLRQAATDPRLVKLEAARRVKGSAKLDWLTQNLPQMVEE--GRRVLIFSQFATLLGLL 981 Query: 85 QKAF---------PQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFF 135 ++ G+T D+ +Q + +G++P+ + G GLNL + ++ Sbjct: 982 EETLGELGLGYTKLTGQTKDR-ATPVQRFQQGEVPVFLISLKAGGVGLNLT-AADTVIHL 1039 Query: 136 SLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 WW+ Q +R + G + VFVY LIA +++E +L + KS + +L Sbjct: 1040 DPWWNPAAENQATDR-----AYRIGQDKPVFVYKLIAAGSVEERILDLQQRKSALAQGVL 1094 Query: 196 NA 197 + Sbjct: 1095 DG 1096 >gi|325695119|gb|EGD37021.1| Snf2 family protein [Streptococcus sanguinis SK150] Length = 1033 Score = 133 bits (335), Expect = 2e-29, Method: Composition-based stats. Identities = 38/215 (17%), Positives = 85/215 (39%), Gaps = 24/215 (11%) Query: 1 MKQYHKFQRELYCDLQGENIE--AFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKA 58 + + ++ + I S ++ Q+ + + E+ E K+++ Sbjct: 812 LALLKQM-QDRIIHATEDEINRSKIEILSGLMRLRQICDTPKLFMED---YEGESGKLES 867 Query: 59 LEVIIEKANA--APIIVAYHFNSDLARLQKAFPQ---------GRTLDKDPCTIQ-EWNE 106 L ++E+ +++ F L ++ + G T K+ + +N+ Sbjct: 868 LRELLEQIQDGNRRVLIFSQFRGMLDIIESELDKMGMESFKITGSTPAKERQDMTTAFND 927 Query: 107 GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVF 166 G+ + G GLNL G + ++ LWW+ Q I R + G +R V Sbjct: 928 GQRSAFLISLKAGGVGLNLT-GADTVILVDLWWNPAVEAQAIGR-----AHRIGQERNVE 981 Query: 167 VYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 VY +I + TI+E + + +K + +L+ ++ + Sbjct: 982 VYRMITRGTIEEKIQELQESKRNLVSTILDGVEAK 1016 >gi|225861356|ref|YP_002742865.1| Snf2 family protein [Streptococcus pneumoniae Taiwan19F-14] gi|298230251|ref|ZP_06963932.1| Snf2 family protein [Streptococcus pneumoniae str. Canada MDR_19F] gi|298503259|ref|YP_003725199.1| Snf2 family helicase [Streptococcus pneumoniae TCH8431/19A] gi|225727638|gb|ACO23489.1| Snf2 family protein [Streptococcus pneumoniae Taiwan19F-14] gi|298238854|gb|ADI69985.1| Snf2 family helicase [Streptococcus pneumoniae TCH8431/19A] gi|327389708|gb|EGE88053.1| helicase conserved C-terminal domain protein [Streptococcus pneumoniae GA04375] Length = 1032 Score = 133 bits (335), Expect = 2e-29, Method: Composition-based stats. Identities = 36/208 (17%), Positives = 79/208 (37%), Gaps = 23/208 (11%) Query: 9 RELYCDLQGENI--EAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIE-- 64 R+ + + S ++ Q+ + + E+ + K+ +L ++ Sbjct: 816 RDHLAQVSEQEFQRSRVEILSGLMRLRQICDTPALFMED---YQGASGKLDSLRDLLVQV 872 Query: 65 KANAAPIIVAYHFNSDLARLQKAFPQ---------GRTLDKDPCTI-QEWNEGKIPLLFA 114 +++ F L ++++ P G T K+ + + +N+G+ Sbjct: 873 ADGGHRVLIFSQFKGMLEKIEQELPDLGLTSFKITGSTPAKERQDMTKAFNQGERDAFLI 932 Query: 115 HPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQN 174 + G GLNL G + ++ LWW+ Q I R + G + V VY L+ + Sbjct: 933 SLKAGGVGLNLT-GADTVILVDLWWNPAVEAQAIGR-----AHRMGQEETVEVYRLVTKG 986 Query: 175 TIDELVLQRLRTKSTIQDLLLNALKKET 202 TI+E + + K + +L+ + Sbjct: 987 TIEEKIQELQEQKKHLVSQVLDGTESRG 1014 >gi|168487493|ref|ZP_02712001.1| Snf2 family protein [Streptococcus pneumoniae CDC1087-00] gi|183569678|gb|EDT90206.1| Snf2 family protein [Streptococcus pneumoniae CDC1087-00] Length = 1032 Score = 133 bits (335), Expect = 2e-29, Method: Composition-based stats. Identities = 36/208 (17%), Positives = 79/208 (37%), Gaps = 23/208 (11%) Query: 9 RELYCDLQGENI--EAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIE-- 64 R+ + + S ++ Q+ + + E+ + K+ +L ++ Sbjct: 816 RDHLAQVSEQEFQRSRVEILSGLMRLRQICDTPALFMED---YQGASGKLDSLRDLLVQV 872 Query: 65 KANAAPIIVAYHFNSDLARLQKAFPQ---------GRTLDKDPCTI-QEWNEGKIPLLFA 114 +++ F L ++++ P G T K+ + + +N+G+ Sbjct: 873 ADGGHRVLIFSQFKGMLEKIEQELPDLGLTSFKITGSTPAKERQDMTKAFNQGERDAFLI 932 Query: 115 HPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQN 174 + G GLNL G + ++ LWW+ Q I R + G + V VY L+ + Sbjct: 933 SLKAGGVGLNLT-GADTVILVDLWWNPAVEAQAIGR-----AHRMGQEETVEVYRLVTKG 986 Query: 175 TIDELVLQRLRTKSTIQDLLLNALKKET 202 TI+E + + K + +L+ + Sbjct: 987 TIEEKIQELQEQKKHLVSQVLDGTESRG 1014 >gi|163798146|ref|ZP_02192082.1| swf/snf family helicase [alpha proteobacterium BAL199] gi|159176589|gb|EDP61167.1| swf/snf family helicase [alpha proteobacterium BAL199] Length = 1381 Score = 133 bits (335), Expect = 2e-29, Method: Composition-based stats. Identities = 40/210 (19%), Positives = 75/210 (35%), Gaps = 25/210 (11%) Query: 4 YHKFQRELYCDLQGENIEA----FNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKAL 59 Y +R+ L + A ++ + + D++ V K+ A Sbjct: 1163 YEALRRQSLDRLAAVDAPAGQRKIQILAEITRLRRACCNPALIDQD---AGVPSGKLAAF 1219 Query: 60 EVIIEKA--NAAPIIVAYHFNSDLAR---------LQKAFPQGRTLDKD-PCTIQEWNEG 107 +++ N +V F + LA ++ + G T D + + G Sbjct: 1220 LDLVDDLVRNRHRALVFSQFVAHLALVRAALDARGIRYEYLDGSTPAADRERRVAAFQAG 1279 Query: 108 KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFV 167 + + G GLNL + +V WW+ Q +R + G +R V + Sbjct: 1280 TADVFLISLRAGGTGLNLT-AADYVVHLDPWWNPAVEDQASDR-----AHRIGQERPVTI 1333 Query: 168 YYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 Y LI Q++I+E +L R K + +L Sbjct: 1334 YRLIMQDSIEEQILHLHRDKRDLAAGILEG 1363 >gi|148997416|ref|ZP_01825021.1| Snf2 family protein [Streptococcus pneumoniae SP11-BS70] gi|168575282|ref|ZP_02721245.1| Snf2 family protein [Streptococcus pneumoniae MLV-016] gi|307068167|ref|YP_003877133.1| superfamily II DNA/RNA helicase [Streptococcus pneumoniae AP200] gi|147756471|gb|EDK63512.1| Snf2 family protein [Streptococcus pneumoniae SP11-BS70] gi|183578817|gb|EDT99345.1| Snf2 family protein [Streptococcus pneumoniae MLV-016] gi|306409704|gb|ADM85131.1| Superfamily II DNA/RNA helicase, SNF2 family [Streptococcus pneumoniae AP200] Length = 1032 Score = 133 bits (335), Expect = 2e-29, Method: Composition-based stats. Identities = 36/208 (17%), Positives = 79/208 (37%), Gaps = 23/208 (11%) Query: 9 RELYCDLQGENI--EAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIE-- 64 R+ + + S ++ Q+ + + E+ + K+ +L ++ Sbjct: 816 RDHLAQVSEQEFQRSRVEILSGLMRLRQICDTPALFMED---YQGASGKLDSLRDLLVQV 872 Query: 65 KANAAPIIVAYHFNSDLARLQKAFPQ---------GRTLDKDPCTI-QEWNEGKIPLLFA 114 +++ F L ++++ P G T K+ + + +N+G+ Sbjct: 873 ADGGHRVLIFSQFKGMLEKIEQELPDLGLTSFKITGSTPAKERQDMTKAFNQGERDAFLI 932 Query: 115 HPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQN 174 + G GLNL G + ++ LWW+ Q I R + G + V VY L+ + Sbjct: 933 SLKAGGVGLNLT-GADTVILVDLWWNPAVEAQAIGR-----AHRMGQEETVEVYRLVTKG 986 Query: 175 TIDELVLQRLRTKSTIQDLLLNALKKET 202 TI+E + + K + +L+ + Sbjct: 987 TIEEKIQELQEQKKHLVSQVLDGTESRG 1014 >gi|149003261|ref|ZP_01828157.1| Snf2 family protein [Streptococcus pneumoniae SP14-BS69] gi|237650205|ref|ZP_04524457.1| Snf2 family protein [Streptococcus pneumoniae CCRI 1974] gi|237820912|ref|ZP_04596757.1| Snf2 family protein [Streptococcus pneumoniae CCRI 1974M2] gi|147758721|gb|EDK65718.1| Snf2 family protein [Streptococcus pneumoniae SP14-BS69] Length = 1032 Score = 133 bits (335), Expect = 2e-29, Method: Composition-based stats. Identities = 36/208 (17%), Positives = 79/208 (37%), Gaps = 23/208 (11%) Query: 9 RELYCDLQGENI--EAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIE-- 64 R+ + + S ++ Q+ + + E+ + K+ +L ++ Sbjct: 816 RDHLAQVSEQEFQRSRVEILSGLMRLRQICDTPALFMED---YQGASGKLDSLRDLLVQV 872 Query: 65 KANAAPIIVAYHFNSDLARLQKAFPQ---------GRTLDKDPCTI-QEWNEGKIPLLFA 114 +++ F L ++++ P G T K+ + + +N+G+ Sbjct: 873 ADGGHRVLIFSQFKGMLEKIEQELPDLGLTSFKITGSTPAKERQDMTKAFNQGERDAFLI 932 Query: 115 HPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQN 174 + G GLNL G + ++ LWW+ Q I R + G + V VY L+ + Sbjct: 933 SLKAGGVGLNLT-GADTVILVDLWWNPAVEAQAIGR-----AHRMGQEETVEVYRLVTKG 986 Query: 175 TIDELVLQRLRTKSTIQDLLLNALKKET 202 TI+E + + K + +L+ + Sbjct: 987 TIEEKIQELQEQKKHLVSQVLDGTESRG 1014 >gi|168493424|ref|ZP_02717567.1| Snf2 family protein [Streptococcus pneumoniae CDC3059-06] gi|183576378|gb|EDT96906.1| Snf2 family protein [Streptococcus pneumoniae CDC3059-06] Length = 1032 Score = 133 bits (335), Expect = 2e-29, Method: Composition-based stats. Identities = 36/208 (17%), Positives = 79/208 (37%), Gaps = 23/208 (11%) Query: 9 RELYCDLQGENI--EAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIE-- 64 R+ + + S ++ Q+ + + E+ + K+ +L ++ Sbjct: 816 RDHLAQVSEQEFQRSRVEILSGLMRLRQICDTPALFMED---YQGASGKLDSLRDLLVQV 872 Query: 65 KANAAPIIVAYHFNSDLARLQKAFPQ---------GRTLDKDPCTI-QEWNEGKIPLLFA 114 +++ F L ++++ P G T K+ + + +N+G+ Sbjct: 873 ADGGHRVLIFSQFKGMLEKIEQELPDLGLTSFKITGSTPAKERQDMTKAFNQGERDAFLI 932 Query: 115 HPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQN 174 + G GLNL G + ++ LWW+ Q I R + G + V VY L+ + Sbjct: 933 SLKAGGVGLNLT-GADTVILVDLWWNPAVEAQAIGR-----AHRMGQEETVEVYRLVTKG 986 Query: 175 TIDELVLQRLRTKSTIQDLLLNALKKET 202 TI+E + + K + +L+ + Sbjct: 987 TIEEKIQELQEQKKHLVSQVLDGTESRG 1014 >gi|149021792|ref|ZP_01835799.1| Snf2 family protein [Streptococcus pneumoniae SP23-BS72] gi|147930028|gb|EDK81015.1| Snf2 family protein [Streptococcus pneumoniae SP23-BS72] Length = 1032 Score = 133 bits (335), Expect = 2e-29, Method: Composition-based stats. Identities = 36/208 (17%), Positives = 79/208 (37%), Gaps = 23/208 (11%) Query: 9 RELYCDLQGENI--EAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIE-- 64 R+ + + S ++ Q+ + + E+ + K+ +L ++ Sbjct: 816 RDHLAQVSEQEFQRSRVEILSGLMRLRQICDTPALFMED---YQGASGKLDSLRDLLVQV 872 Query: 65 KANAAPIIVAYHFNSDLARLQKAFPQ---------GRTLDKDPCTI-QEWNEGKIPLLFA 114 +++ F L ++++ P G T K+ + + +N+G+ Sbjct: 873 ADGGHRVLIFSQFKGMLEKIEQELPDLGLTSFKITGSTPAKERQDMTKAFNQGERDAFLI 932 Query: 115 HPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQN 174 + G GLNL G + ++ LWW+ Q I R + G + V VY L+ + Sbjct: 933 SLKAGGVGLNLT-GADTVILVDLWWNPAVEAQAIGR-----AHRMGQEETVEVYRLVTKG 986 Query: 175 TIDELVLQRLRTKSTIQDLLLNALKKET 202 TI+E + + K + +L+ + Sbjct: 987 TIEEKIQELQEQKKHLVSQVLDGTESRG 1014 >gi|225859280|ref|YP_002740790.1| Snf2 family protein [Streptococcus pneumoniae 70585] gi|225720179|gb|ACO16033.1| Snf2 family protein [Streptococcus pneumoniae 70585] Length = 1032 Score = 133 bits (334), Expect = 2e-29, Method: Composition-based stats. Identities = 36/208 (17%), Positives = 79/208 (37%), Gaps = 23/208 (11%) Query: 9 RELYCDLQGENI--EAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIE-- 64 R+ + + S ++ Q+ + + E+ + K+ +L ++ Sbjct: 816 RDHLAQVSEQEFQRSRVEILSGLMRLRQICDTPALFMED---YQGASGKLDSLRDLLVQV 872 Query: 65 KANAAPIIVAYHFNSDLARLQKAFPQ---------GRTLDKDPCTI-QEWNEGKIPLLFA 114 +++ F L ++++ P G T K+ + + +N+G+ Sbjct: 873 ADGGHRVLIFSQFKGMLEKIEQELPDLGLTSFKITGSTPAKERQDMTKAFNQGERDAFLI 932 Query: 115 HPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQN 174 + G GLNL G + ++ LWW+ Q I R + G + V VY L+ + Sbjct: 933 SLKAGGVGLNLT-GADTVILVDLWWNPAVEAQAIGR-----AHRMGQEETVEVYRLVTKG 986 Query: 175 TIDELVLQRLRTKSTIQDLLLNALKKET 202 TI+E + + K + +L+ + Sbjct: 987 TIEEKIQELQEQKKHLVSQVLDGTESRG 1014 >gi|221232235|ref|YP_002511388.1| putative SNF-family helicase [Streptococcus pneumoniae ATCC 700669] gi|220674696|emb|CAR69269.1| putative SNF-family helicase [Streptococcus pneumoniae ATCC 700669] Length = 1032 Score = 133 bits (334), Expect = 2e-29, Method: Composition-based stats. Identities = 36/208 (17%), Positives = 79/208 (37%), Gaps = 23/208 (11%) Query: 9 RELYCDLQGENI--EAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIE-- 64 R+ + + S ++ Q+ + + E+ + K+ +L ++ Sbjct: 816 RDHLAQVSEQEFQRSRVEILSGLMRLRQICDTPALFMED---YQGASGKLDSLRDLLVQV 872 Query: 65 KANAAPIIVAYHFNSDLARLQKAFPQ---------GRTLDKDPCTI-QEWNEGKIPLLFA 114 +++ F L ++++ P G T K+ + + +N+G+ Sbjct: 873 ADGGHRVLIFSQFKGMLEKIEQELPDLGLTSFKITGSTPAKERQDMTKAFNQGERDAFLI 932 Query: 115 HPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQN 174 + G GLNL G + ++ LWW+ Q I R + G + V VY L+ + Sbjct: 933 SLKAGGVGLNLT-GADTVILVDLWWNPAVEAQAIGR-----AHRMGQEETVEVYRLVTKG 986 Query: 175 TIDELVLQRLRTKSTIQDLLLNALKKET 202 TI+E + + K + +L+ + Sbjct: 987 TIEEKIQELQEQKKHLVSQVLDGTESRG 1014 >gi|148988567|ref|ZP_01820000.1| Snf2 family protein [Streptococcus pneumoniae SP6-BS73] gi|147925768|gb|EDK76843.1| Snf2 family protein [Streptococcus pneumoniae SP6-BS73] Length = 1032 Score = 133 bits (334), Expect = 2e-29, Method: Composition-based stats. Identities = 36/208 (17%), Positives = 79/208 (37%), Gaps = 23/208 (11%) Query: 9 RELYCDLQGENI--EAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIE-- 64 R+ + + S ++ Q+ + + E+ + K+ +L ++ Sbjct: 816 RDHLAQVSEQEFQRSRVEILSGLMRLRQICDTPALFMED---YQGASGKLDSLRDLLVQV 872 Query: 65 KANAAPIIVAYHFNSDLARLQKAFPQ---------GRTLDKDPCTI-QEWNEGKIPLLFA 114 +++ F L ++++ P G T K+ + + +N+G+ Sbjct: 873 ADGGHRVLIFSQFKGMLEKIEQELPDLGLTSFKITGSTPAKERQDMTKAFNQGERDAFLI 932 Query: 115 HPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQN 174 + G GLNL G + ++ LWW+ Q I R + G + V VY L+ + Sbjct: 933 SLKAGGVGLNLT-GADTVILVDLWWNPAVEAQAIGR-----AHRMGQEETVEVYRLVTKG 986 Query: 175 TIDELVLQRLRTKSTIQDLLLNALKKET 202 TI+E + + K + +L+ + Sbjct: 987 TIEEKIQELQEQKKHLVSQVLDGTESRG 1014 >gi|300811728|ref|ZP_07092202.1| SNF2 family N-terminal domain protein [Lactobacillus delbrueckii subsp. bulgaricus PB2003/044-T3-4] gi|300497304|gb|EFK32352.1| SNF2 family N-terminal domain protein [Lactobacillus delbrueckii subsp. bulgaricus PB2003/044-T3-4] Length = 1185 Score = 133 bits (334), Expect = 2e-29, Method: Composition-based stats. Identities = 44/217 (20%), Positives = 85/217 (39%), Gaps = 32/217 (14%) Query: 2 KQYH----KFQRELYCDLQGE-NIEAFNSASKTVKCLQLAN--GAVYYDEEKHWKEVHDE 54 K Y + + ++ + E + + ++ G +Y D + E Sbjct: 962 KLYDAEIARLKNKVMAEDDEGIKREQIEILAALTRIREICCDPGLLYEDYKGE-----SE 1016 Query: 55 KIKALEVIIEKA--NAAPIIVAYHFNSDLARLQKAFP---------QGRTLD-KDPCTIQ 102 K A +I+ A +++ F S L L+++ G+T K + Sbjct: 1017 KRLACVDLIKSAIDGGHKVLLFSQFTSMLDLLEESLKAEEIVFLRIDGQTPKAKRLTLVN 1076 Query: 103 EWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 +N P + + G GLNL G + ++ + WW++ Q +R + G Sbjct: 1077 VFNHKDSPAKVFLISLKAGGTGLNLT-GADTVIHYDPWWNVAAQNQATDR-----AHRIG 1130 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 ++ V VY LIA++T++E +L KS + +L A Sbjct: 1131 QEKKVTVYKLIAKDTVEEAILDLQEAKSQLAQGILTA 1167 >gi|255528070|ref|ZP_05394903.1| Non-specific serine/threonine protein kinase [Clostridium carboxidivorans P7] gi|296186302|ref|ZP_06854706.1| SNF2 family [Clostridium carboxidivorans P7] gi|255508235|gb|EET84642.1| Non-specific serine/threonine protein kinase [Clostridium carboxidivorans P7] gi|296049103|gb|EFG88533.1| SNF2 family [Clostridium carboxidivorans P7] Length = 1081 Score = 133 bits (334), Expect = 2e-29, Method: Composition-based stats. Identities = 41/210 (19%), Positives = 79/210 (37%), Gaps = 30/210 (14%) Query: 1 MKQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGA--VYYDEEKHWKEVHDEKIKA 58 M+ K ++ I A+ K QL + D KI+A Sbjct: 865 MELIKKKVKDFEFQNSKIEILAY-----ITKLRQLCLDPRVIIKDYNGE-----SAKIEA 914 Query: 59 LEVIIEKA--NAAPIIVAYHFNSDLARLQKAFPQGRT----------LDKDPCTIQEWNE 106 L ++ K+ I+V F S L + + + +K + ++N+ Sbjct: 915 LVELLSKSIGQGHRILVFSQFTSVLKNIGRRINKEDICFSYLDGSIPSEKRINLVNDFNQ 974 Query: 107 GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVF 166 G+ + + G GLNL ++++ F WW+ +Q +R + G K+ V Sbjct: 975 GENSVFLISLKAGGTGLNLT-SADVVIHFDPWWNPAVEEQATDR-----AHRIGQKKVVE 1028 Query: 167 VYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 V ++A+ TI+E ++ K + L+ Sbjct: 1029 VIKIVAKGTIEEKIISLQEEKKKLIGSLIE 1058 >gi|291457361|ref|ZP_06596751.1| protein, SNF2 family [Bifidobacterium breve DSM 20213] gi|291381196|gb|EFE88714.1| protein, SNF2 family [Bifidobacterium breve DSM 20213] Length = 1358 Score = 133 bits (334), Expect = 2e-29, Method: Composition-based stats. Identities = 40/215 (18%), Positives = 77/215 (35%), Gaps = 30/215 (13%) Query: 2 KQYHKFQRELYCDLQGENIEAFNS-----ASKTVKCLQLANGA--VYYDEEKHWKEVHDE 54 K Y ++ L L+ FN+ ++ + Q+ +Y D + Sbjct: 1121 KLYAAHEQRLRMQLEHSEEAEFNTSKIRILAELTRLRQICCDPRLLYADAKDQ-----SA 1175 Query: 55 KIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFP----------QGRTLDKDPCTIQ 102 K+ A+ ++E ++ F S L + + F K + Sbjct: 1176 KLAAIAELVETCVNEGKKALIFSQFTSFLDLIAERFDAQGLRYYTITGSTPKRKRLELVD 1235 Query: 103 EWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFK 162 ++N P + GLNL G ++++ WW+ R + G Sbjct: 1236 QFNADDTPAFLISLKAGNTGLNLT-GASVVIHADPWWNAAAQD-----QAADRAHRIGQT 1289 Query: 163 RAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 V VY ++A++TI+E +L+ TKS + +A Sbjct: 1290 EDVNVYQVVAKDTIEERILELQHTKSELARQFTDA 1324 >gi|28211487|ref|NP_782431.1| SWF/SNF family helicase [Clostridium tetani E88] gi|28203928|gb|AAO36368.1| SWF/SNF family helicase [Clostridium tetani E88] Length = 1093 Score = 133 bits (334), Expect = 2e-29, Method: Composition-based stats. Identities = 45/211 (21%), Positives = 85/211 (40%), Gaps = 28/211 (13%) Query: 2 KQYHKFQRELYCD-LQGENIEAFNSASKTV--KCLQLANGAVYYDEEKHWKEVH--DEKI 56 K Y + EL ++ + + A + K QL D K+ + + K+ Sbjct: 870 KAYANYAMELIEKKVKDDEFKKSKIAILSYITKLRQLC-----LDPTVTMKDYNGGNGKM 924 Query: 57 KALEVIIEKA--NAAPIIVAYHFNSDLA----RLQKAFPQGRTLD------KDPCTIQEW 104 +AL ++ ++ I++ F S L R+ K LD K ++++ Sbjct: 925 EALVDLLLQSIGEGHRILIFSQFTSVLKNIGKRIIKEGIDFSYLDGSIPSEKRMNMVRDF 984 Query: 105 NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA 164 N+GK + + G GLNL ++++ F WW+ Q +R + G + Sbjct: 985 NDGKNSVFLISLKAGGTGLNLT-SADVVIHFDPWWNPAVEDQATDR-----AHRIGQQNV 1038 Query: 165 VFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 V V +IA+ TI+E ++ K + L+ Sbjct: 1039 VEVIKIIAKGTIEEKIILLQEEKKKLISELM 1069 >gi|182415317|ref|YP_001820383.1| non-specific serine/threonine protein kinase [Opitutus terrae PB90-1] gi|177842531|gb|ACB76783.1| Non-specific serine/threonine protein kinase [Opitutus terrae PB90-1] Length = 848 Score = 133 bits (334), Expect = 2e-29, Method: Composition-based stats. Identities = 34/159 (21%), Positives = 56/159 (35%), Gaps = 19/159 (11%) Query: 52 HDEKIKALEVIIEKA--NAAPIIVAYHFNSD---------LARLQKAFPQGR--TLDKDP 98 K+ A ++ +A + ++V F S + + G + Sbjct: 678 DSAKLDAFRELLAEAVDDGHRVLVFSQFTSLLALLREELAVQETAHCYLDGSMPPRARQA 737 Query: 99 CTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQ 158 + N IP+ + G GLNL + +V F WW+ Q +R + Sbjct: 738 EVDRFQNSPDIPVFLISLKAGGTGLNLT-AADTVVHFDPWWNPAAEAQATDR-----AHR 791 Query: 159 AGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 G R V Y LIA T++E VL K + + A Sbjct: 792 IGQSRIVTSYKLIASGTVEEKVLALQEEKRALLAGVFEA 830 >gi|149011758|ref|ZP_01832954.1| Snf2 family protein [Streptococcus pneumoniae SP19-BS75] gi|182684478|ref|YP_001836225.1| snf2 family protein [Streptococcus pneumoniae CGSP14] gi|303255308|ref|ZP_07341378.1| snf2 family protein [Streptococcus pneumoniae BS455] gi|303260148|ref|ZP_07346120.1| snf2 family protein [Streptococcus pneumoniae SP-BS293] gi|303262538|ref|ZP_07348479.1| snf2 family protein [Streptococcus pneumoniae SP14-BS292] gi|303264940|ref|ZP_07350855.1| snf2 family protein [Streptococcus pneumoniae BS397] gi|303267250|ref|ZP_07353114.1| snf2 family protein [Streptococcus pneumoniae BS457] gi|303269560|ref|ZP_07355323.1| snf2 family protein [Streptococcus pneumoniae BS458] gi|147764189|gb|EDK71121.1| Snf2 family protein [Streptococcus pneumoniae SP19-BS75] gi|182629812|gb|ACB90760.1| snf2 family protein [Streptococcus pneumoniae CGSP14] gi|302597676|gb|EFL64752.1| snf2 family protein [Streptococcus pneumoniae BS455] gi|302636255|gb|EFL66749.1| snf2 family protein [Streptococcus pneumoniae SP14-BS292] gi|302638645|gb|EFL69108.1| snf2 family protein [Streptococcus pneumoniae SP-BS293] gi|302640904|gb|EFL71288.1| snf2 family protein [Streptococcus pneumoniae BS458] gi|302643215|gb|EFL73498.1| snf2 family protein [Streptococcus pneumoniae BS457] gi|302645459|gb|EFL75691.1| snf2 family protein [Streptococcus pneumoniae BS397] Length = 1032 Score = 133 bits (334), Expect = 2e-29, Method: Composition-based stats. Identities = 36/208 (17%), Positives = 79/208 (37%), Gaps = 23/208 (11%) Query: 9 RELYCDLQGENI--EAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIE-- 64 R+ + + S ++ Q+ + + E+ + K+ +L ++ Sbjct: 816 RDHLAQVSEQEFQRSRVEILSGLMRLRQICDTPALFMED---YQGASGKLDSLRDLLVQV 872 Query: 65 KANAAPIIVAYHFNSDLARLQKAFPQ---------GRTLDKDPCTI-QEWNEGKIPLLFA 114 +++ F L ++++ P G T K+ + + +N+G+ Sbjct: 873 ADGGHRVLIFSQFKGMLEKIEQELPDLGLTSFKITGSTPAKERQDMTKAFNQGERDAFLI 932 Query: 115 HPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQN 174 + G GLNL G + ++ LWW+ Q I R + G + V VY L+ + Sbjct: 933 SLKAGGVGLNLT-GADTVILVDLWWNPAVEAQAIGR-----AHRMGQEETVEVYRLVTKG 986 Query: 175 TIDELVLQRLRTKSTIQDLLLNALKKET 202 TI+E + + K + +L+ + Sbjct: 987 TIEEKIQELQEQKKHLVSQVLDGTESRG 1014 >gi|317126472|ref|YP_004100584.1| SNF2-related protein [Intrasporangium calvum DSM 43043] gi|315590560|gb|ADU49857.1| SNF2-related protein [Intrasporangium calvum DSM 43043] Length = 1147 Score = 133 bits (334), Expect = 2e-29, Method: Composition-based stats. Identities = 43/202 (21%), Positives = 72/202 (35%), Gaps = 18/202 (8%) Query: 6 KFQRELYCDLQGENI-EAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIE 64 + +R+ L + + + QLA DE K + +E + E Sbjct: 932 QRERQRVLGLLADAEGNRVAILASLTRLRQLALDPALVDEAHRGKATAAKVEFLVEQLRE 991 Query: 65 -KANAAPIIVAYHFNSDL---------ARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFA 114 A +V F L A L+ A+ G T D+ P I+ + G Sbjct: 992 LAAEGHRALVFSQFTGFLRVVEGALAAAGLRTAYLDGSTTDR-PSVIRGFRHGDATAFLI 1050 Query: 115 HPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQN 174 + G GL L + V WW+ Q I+R + G + V VY L++ Sbjct: 1051 SLKAGGFGLTLTEADYVFVL-DPWWNPAAEAQAIDR-----AHRIGQDKPVTVYRLVSAG 1104 Query: 175 TIDELVLQRLRTKSTIQDLLLN 196 TI+E V+ K + +++ Sbjct: 1105 TIEEKVVALQERKRDLFQRVVD 1126 >gi|15903418|ref|NP_358968.1| Snf2 family protein [Streptococcus pneumoniae R6] gi|116516877|ref|YP_816813.1| Snf2 family protein [Streptococcus pneumoniae D39] gi|15459024|gb|AAL00179.1| SWF/SNF family ATP-dependent RNA helicase [Streptococcus pneumoniae R6] gi|116077453|gb|ABJ55173.1| Snf2 family protein [Streptococcus pneumoniae D39] Length = 1032 Score = 133 bits (334), Expect = 2e-29, Method: Composition-based stats. Identities = 36/208 (17%), Positives = 79/208 (37%), Gaps = 23/208 (11%) Query: 9 RELYCDLQGENI--EAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIE-- 64 R+ + + S ++ Q+ + + E+ + K+ +L ++ Sbjct: 816 RDHLAQVSEQEFQRSRVEILSGLMRLRQICDTPALFMED---YQGASGKLDSLRDLLVQV 872 Query: 65 KANAAPIIVAYHFNSDLARLQKAFPQ---------GRTLDKDPCTI-QEWNEGKIPLLFA 114 +++ F L ++++ P G T K+ + + +N+G+ Sbjct: 873 ADGGHRVLIFSQFKGMLEKIEQELPDLGLTSFKITGSTPAKERQDMTKAFNQGERDAFLI 932 Query: 115 HPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQN 174 + G GLNL G + ++ LWW+ Q I R + G + V VY L+ + Sbjct: 933 SLKAGGVGLNLT-GADTVILVDLWWNPAVEAQAIGR-----AHRMGQEETVEVYRLVTKG 986 Query: 175 TIDELVLQRLRTKSTIQDLLLNALKKET 202 TI+E + + K + +L+ + Sbjct: 987 TIEEKIQELQEQKKHLVSQVLDGTESRG 1014 >gi|294812014|ref|ZP_06770657.1| SNF2/RAD54 family helicase [Streptomyces clavuligerus ATCC 27064] gi|326440261|ref|ZP_08214995.1| helicase [Streptomyces clavuligerus ATCC 27064] gi|294324613|gb|EFG06256.1| SNF2/RAD54 family helicase [Streptomyces clavuligerus ATCC 27064] Length = 986 Score = 133 bits (334), Expect = 2e-29, Method: Composition-based stats. Identities = 37/223 (16%), Positives = 74/223 (33%), Gaps = 36/223 (16%) Query: 3 QYHKFQRELYCDLQGENIEAFNSAS--KTVKCLQLANGAVYY----------------DE 44 Y RE ++G A Q+ N + Sbjct: 745 LYEAAVREAMAAIEGAEGMARRGMVMKLLTDLKQICNHPAQFLKEPGRTGPGHRGSPGRG 804 Query: 45 EKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFP----------QGR 92 K+ L+ ++E A +++ + + L + G Sbjct: 805 PGTRLAGRSGKLALLDELLETILAEEGAVLIFTQYVTMARLLLEHLSARSVPAQLLHGGT 864 Query: 93 TLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIG 152 + + + + G+IP+ + G GLNL G+ ++ + WW+ +Q +R Sbjct: 865 PVAERQRMVDRFQSGEIPVFVLSLKAAGTGLNLTRAGH-VIHYDRWWNPAVEEQATDR-- 921 Query: 153 VTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 + G R V V+ LI + T+++ + L K + D +L Sbjct: 922 ---AYRIGQTRPVQVHRLITEGTVEDRIAGMLAAKRALADAVL 961 >gi|254391562|ref|ZP_05006762.1| SNF2/RAD54 family helicase [Streptomyces clavuligerus ATCC 27064] gi|197705249|gb|EDY51061.1| SNF2/RAD54 family helicase [Streptomyces clavuligerus ATCC 27064] Length = 754 Score = 133 bits (334), Expect = 2e-29, Method: Composition-based stats. Identities = 37/223 (16%), Positives = 74/223 (33%), Gaps = 36/223 (16%) Query: 3 QYHKFQRELYCDLQGENIEAFNSAS--KTVKCLQLANGAVYY----------------DE 44 Y RE ++G A Q+ N + Sbjct: 513 LYEAAVREAMAAIEGAEGMARRGMVMKLLTDLKQICNHPAQFLKEPGRTGPGHRGSPGRG 572 Query: 45 EKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFP----------QGR 92 K+ L+ ++E A +++ + + L + G Sbjct: 573 PGTRLAGRSGKLALLDELLETILAEEGAVLIFTQYVTMARLLLEHLSARSVPAQLLHGGT 632 Query: 93 TLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIG 152 + + + + G+IP+ + G GLNL G+ ++ + WW+ +Q +R Sbjct: 633 PVAERQRMVDRFQSGEIPVFVLSLKAAGTGLNLTRAGH-VIHYDRWWNPAVEEQATDR-- 689 Query: 153 VTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 + G R V V+ LI + T+++ + L K + D +L Sbjct: 690 ---AYRIGQTRPVQVHRLITEGTVEDRIAGMLAAKRALADAVL 729 >gi|322387436|ref|ZP_08061046.1| Snf2 family protein [Streptococcus infantis ATCC 700779] gi|321141965|gb|EFX37460.1| Snf2 family protein [Streptococcus infantis ATCC 700779] Length = 1032 Score = 133 bits (334), Expect = 2e-29, Method: Composition-based stats. Identities = 37/192 (19%), Positives = 78/192 (40%), Gaps = 21/192 (10%) Query: 23 FNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIE--KANAAPIIVAYHFNSD 80 + ++ Q+ + + E+ + K+ +L ++ +++ F Sbjct: 832 VEILTGLMRLRQICDTPALFMED---YKGDSGKLDSLRDLLSQIAEGNHRVLIFSQFRGM 888 Query: 81 LARLQKAFPQ---------GRTLDKDPCTI-QEWNEGKIPLLFAHPASCGHGLNLQYGGN 130 L R++K PQ G T ++ + + +N+G+ + + G GLNL G + Sbjct: 889 LDRIEKELPQLGLTSFKITGSTPSQERQEMTKAFNQGERDVFLISLKAGGVGLNLT-GAD 947 Query: 131 ILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 ++ LWW+ Q I R + G +AV VY L+ + TI+E + + K + Sbjct: 948 TVILVDLWWNPAVESQAIGR-----AHRMGQDQAVEVYRLVTRGTIEEKIQELQEEKKNL 1002 Query: 191 QDLLLNALKKET 202 +L+ + Sbjct: 1003 VSEVLDGTESRG 1014 >gi|167032695|ref|YP_001667926.1| non-specific serine/threonine protein kinase [Pseudomonas putida GB-1] gi|166859183|gb|ABY97590.1| Non-specific serine/threonine protein kinase [Pseudomonas putida GB-1] Length = 1105 Score = 133 bits (334), Expect = 2e-29, Method: Composition-based stats. Identities = 26/141 (18%), Positives = 58/141 (41%), Gaps = 14/141 (9%) Query: 68 AAPIIVAYHFNSDLARLQKAFPQGRTL--------DKDPCTIQEWNEGKIPLLFAHPASC 119 +++ F S LA +++ + + ++++ +G + + Sbjct: 948 GRRVLLFSQFTSMLALIEQELEKRKIRYSLLTGDTRDRRTPVRQFQQGDSEVFLISLKAG 1007 Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 G GLNL + ++ F WW+ Q +R + G + VFV+ LI + T++E Sbjct: 1008 GVGLNLT-AADTVIHFDPWWNPASENQATDR-----AYRIGQDKPVFVFKLITRGTVEEK 1061 Query: 180 VLQRLRTKSTIQDLLLNALKK 200 + + K+ + LL+ + Sbjct: 1062 IQLLQQEKAALAASLLDGGQA 1082 >gi|330506407|ref|YP_004382835.1| SNF2 family helicase [Methanosaeta concilii GP-6] gi|328927215|gb|AEB67017.1| SNF2 family helicase [Methanosaeta concilii GP-6] Length = 1035 Score = 133 bits (334), Expect = 2e-29, Method: Composition-based stats. Identities = 38/208 (18%), Positives = 77/208 (37%), Gaps = 21/208 (10%) Query: 3 QYHKFQRELYCDLQGENIEAFNS--ASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 Y ++ ++ + K Q+ N + ++ E K+ LE Sbjct: 795 LYAAVVEDMLSRIESSEGMKRRGQILAALTKLKQICNHPALFLQDGSPLEGRSGKLSRLE 854 Query: 61 VIIEKA--NAAPIIVAYHF-------NSDLAR---LQKAFPQGRT-LDKDPCTIQEWNEG 107 ++++A ++ F L ++ F G+T + IQ + +G Sbjct: 855 EMLDEAISVGDRALIFTQFAGMGAMLRHQLQEKLGVEVLFLHGKTSRKQREEMIQRFQQG 914 Query: 108 KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFV 167 P+ + G GLNL N + F WW+ Q +R + G K+ VFV Sbjct: 915 SSPIFILSLKAGGFGLNLT-AANHVFHFDRWWNPAVENQATDR-----AFRIGQKKNVFV 968 Query: 168 YYLIAQNTIDELVLQRLRTKSTIQDLLL 195 + + T++E + Q + K + + ++ Sbjct: 969 HKFVCAGTLEERIDQMIEQKKALAESVI 996 >gi|300778365|ref|ZP_07088223.1| Snf2 family protein [Chryseobacterium gleum ATCC 35910] gi|300503875|gb|EFK35015.1| Snf2 family protein [Chryseobacterium gleum ATCC 35910] Length = 1113 Score = 133 bits (334), Expect = 2e-29, Method: Composition-based stats. Identities = 45/209 (21%), Positives = 78/209 (37%), Gaps = 23/209 (11%) Query: 2 KQYHKFQREL---YCDLQGENIEAFNSASKTV--KCLQLANGAVYYDEEKHWKEVHDEKI 56 K Y +++EL +++ + T + Q+ N V E + + KI Sbjct: 890 KIYDAYEKELREFVAANDDDDLNKNSMHVLTGLTRLRQICNSPVLMKEG--YSGENAVKI 947 Query: 57 KAL-EVIIEKANAAPIIVAYHFNSDLARLQKAFPQ---------GRTLDKDPCTIQEWNE 106 + L E I+ K+ I+V F L ++ Q G+T D+ N Sbjct: 948 EILTEQILGKSKDHKILVFSQFVGMLDLIKAELEQHNIGYEYLTGQTKDRGEKVTHFQNN 1007 Query: 107 GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVF 166 I + + G GLNL + + WW+ Q I+R + G + V Sbjct: 1008 EDIRVFLISLKAGGVGLNLTQ-ADYIYLVDPWWNPAAENQAIDR-----SYRIGQTKNVI 1061 Query: 167 VYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 +I NT++E +L + K + LL Sbjct: 1062 AIRMICSNTVEEKILTLQKKKKQLAQNLL 1090 >gi|88857070|ref|ZP_01131713.1| helicase [Pseudoalteromonas tunicata D2] gi|88820267|gb|EAR30079.1| helicase [Pseudoalteromonas tunicata D2] Length = 1402 Score = 133 bits (334), Expect = 2e-29, Method: Composition-based stats. Identities = 41/213 (19%), Positives = 78/213 (36%), Gaps = 29/213 (13%) Query: 4 YHKFQRELYCDLQGENIEAFNSA-------SKTVKCLQLANGAVYYDEEKHWKEVHDEKI 56 Y ++ L + N+A ++ K Q + + K+ Sbjct: 1180 YEALRQTAITKLTEAS-NHSNAAEQRIRMLAELTKLRQACCHPALIMPDTT---LTSSKL 1235 Query: 57 KALEVIIEKA--NAAPIIVAYHFNSDLARLQKAFP---------QGRTLDKDPCT-IQEW 104 AL ++ + N ++ F LA +++ G T K+ + + Sbjct: 1236 AALNTLLIELQQNNHKALIFSQFVGHLALIKQHLDAQDISYQYLDGSTPTKERQQRVNAF 1295 Query: 105 NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA 164 G+ + + G GLNL + ++ WW+ +Q +R + G +R Sbjct: 1296 QRGEGDVFLISLKAGGSGLNLT-AADYVIHMDPWWNPAVEEQASDR-----AHRMGQQRP 1349 Query: 165 VFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 V VY LIA+ TI+E ++ + K + D LL Sbjct: 1350 VTVYRLIAKGTIEEQIVAMHQHKRDLADTLLAG 1382 >gi|91204322|emb|CAJ71975.1| conserved hypothetical protein [Candidatus Kuenenia stuttgartiensis] Length = 1383 Score = 133 bits (334), Expect = 2e-29, Method: Composition-based stats. Identities = 34/210 (16%), Positives = 77/210 (36%), Gaps = 25/210 (11%) Query: 4 YHKFQRELYCDLQ----GENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKAL 59 Y +++ +++ G+ ++ +K + + + KI+ Sbjct: 1164 YEALRQKAIDNIESFDFGKGEGYLRVLAEIMKLRRACCHSRLVVPG---HSLESSKIRLF 1220 Query: 60 EVIIEKA--NAAPIIVAYHFNSDLARLQ----------KAFPQGRTLDKDPCTIQEWNEG 107 ++++ N +V F LA ++ + + + ++ + G Sbjct: 1221 GEVVQELMENNHKALVFSQFVDYLAIIREYVEGLNISYQYLDGSTPMKERKRSVDAFQSG 1280 Query: 108 KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFV 167 + L + G GLNL + ++ WW+ Q +R + G KR V + Sbjct: 1281 EGELFLISLKAGGLGLNLT-AADYVIHMDPWWNPAVEDQASDR-----AHRIGQKRPVTI 1334 Query: 168 YYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 Y L+ + TI+E ++ + K + D LL Sbjct: 1335 YRLVTKGTIEEKIVNLHQHKRELADSLLEG 1364 >gi|331266037|ref|YP_004325667.1| Snf2 family protein, superfamily II DNA/RNA helicases [Streptococcus oralis Uo5] gi|326682709|emb|CBZ00326.1| Snf2 family protein, superfamily II DNA/RNA helicases [Streptococcus oralis Uo5] Length = 1031 Score = 133 bits (334), Expect = 2e-29, Method: Composition-based stats. Identities = 39/209 (18%), Positives = 81/209 (38%), Gaps = 25/209 (11%) Query: 9 RELYCDLQGENI--EAFNSASKTVKCLQLA-NGAVYYDEEKHWKEVHDEKIKALEVII-- 63 R+ + + S ++ Q+ A++ D+ + K+ +L ++ Sbjct: 815 RDRLAQVTDQEFQRSRVEILSGLMRLRQICDTPALFMDD----YQGASGKLDSLRDLLLQ 870 Query: 64 EKANAAPIIVAYHFNSDLARLQKAFPQ---------GRTLDKDPCTI-QEWNEGKIPLLF 113 A +++ F L ++++ P G T D + + +N+G+ Sbjct: 871 VAAGGHRVLIFSQFKGMLEKIEQELPDLGLTSFKITGSTPAHDRQEMTKAFNQGERDAFL 930 Query: 114 AHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQ 173 + G GLNL G + ++ LWW+ Q I R + G ++ V VY LI + Sbjct: 931 ISLKAGGVGLNLT-GADTVILVDLWWNPAVEAQAIGR-----AHRMGQEQKVEVYRLITK 984 Query: 174 NTIDELVLQRLRTKSTIQDLLLNALKKET 202 TI+E + + K + +L+ + Sbjct: 985 GTIEEKIQELQEQKKHLVSQVLDGTESRA 1013 >gi|300869843|ref|YP_003784714.1| HepA Superfamily II D R helicase [Brachyspira pilosicoli 95/1000] gi|300687542|gb|ADK30213.1| HepA Superfamily II D R helicases SNF2 family [Brachyspira pilosicoli 95/1000] Length = 1005 Score = 132 bits (333), Expect = 2e-29, Method: Composition-based stats. Identities = 35/179 (19%), Positives = 66/179 (36%), Gaps = 16/179 (8%) Query: 27 SKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARL 84 S + Q+ ++ K +I +A ++V F L + Sbjct: 813 SALTRLRQVCCHPRLMHQDLRGDSHTSGKFNMFIEMIREAISGGHSVLVFSSFTRMLNIM 872 Query: 85 QKAFPQ--------GRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFS 136 + AF + T + +N G+ P+ + G GL L + ++ + Sbjct: 873 RDAFNKLNINYLYLDGTTKNRMDLVHRFNAGEAPIFLLSLKAAGTGLTLTQ-ADTVIHYD 931 Query: 137 LWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 LWW+ Q +R + G KR V Y L+ + TI+E +L+ K + D ++ Sbjct: 932 LWWNPAVEDQATDR-----AYRIGQKRVVTNYKLVTRGTIEEKILELQNKKRVLIDTVV 985 >gi|239932688|ref|ZP_04689641.1| helicase [Streptomyces ghanaensis ATCC 14672] Length = 624 Score = 132 bits (333), Expect = 2e-29, Method: Composition-based stats. Identities = 41/208 (19%), Positives = 83/208 (39%), Gaps = 21/208 (10%) Query: 3 QYHKFQRELYCDLQGENIEAFNSA--SKTVKCLQLANG-AVYYDEEKHWKEVHDEKIKAL 59 Y RE ++ G + A Q+ N A + EE+ K++ L Sbjct: 397 LYEAVVREALAEISGADGAARRGLIVKLLTGLKQICNHPAQFLKEERPVVAGRSGKLELL 456 Query: 60 EVIIEK--ANAAPIIVAYHFNSDLARLQKAFP----------QGRTLDKDPCTIQEWNEG 107 + +++ A A ++V + LQ+ G + + ++ + +G Sbjct: 457 DELLDTVLAERAGVLVFTQYVQMARLLQRHLAARGVPEQFLHGGTPVAEREAMVRRFQDG 516 Query: 108 KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFV 167 ++P+ + G GLNL + +V + WW+ Q +R + G R V V Sbjct: 517 EVPVFLLSLKAAGTGLNLTRAEH-VVHYDRWWNPAVEAQATDR-----AYRIGQTRPVQV 570 Query: 168 YYLIAQNTIDELVLQRLRTKSTIQDLLL 195 + +IA+ T+++ + + L K + D +L Sbjct: 571 HRIIAEGTVEDRIAELLVRKRELADAVL 598 >gi|291441044|ref|ZP_06580434.1| SNF2/RAD54 family helicase [Streptomyces ghanaensis ATCC 14672] gi|291343939|gb|EFE70895.1| SNF2/RAD54 family helicase [Streptomyces ghanaensis ATCC 14672] Length = 619 Score = 132 bits (333), Expect = 2e-29, Method: Composition-based stats. Identities = 41/208 (19%), Positives = 83/208 (39%), Gaps = 21/208 (10%) Query: 3 QYHKFQRELYCDLQGENIEAFNSA--SKTVKCLQLANG-AVYYDEEKHWKEVHDEKIKAL 59 Y RE ++ G + A Q+ N A + EE+ K++ L Sbjct: 392 LYEAVVREALAEISGADGAARRGLIVKLLTGLKQICNHPAQFLKEERPVVAGRSGKLELL 451 Query: 60 EVIIEK--ANAAPIIVAYHFNSDLARLQKAFP----------QGRTLDKDPCTIQEWNEG 107 + +++ A A ++V + LQ+ G + + ++ + +G Sbjct: 452 DELLDTVLAERAGVLVFTQYVQMARLLQRHLAARGVPEQFLHGGTPVAEREAMVRRFQDG 511 Query: 108 KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFV 167 ++P+ + G GLNL + +V + WW+ Q +R + G R V V Sbjct: 512 EVPVFLLSLKAAGTGLNLTRAEH-VVHYDRWWNPAVEAQATDR-----AYRIGQTRPVQV 565 Query: 168 YYLIAQNTIDELVLQRLRTKSTIQDLLL 195 + +IA+ T+++ + + L K + D +L Sbjct: 566 HRIIAEGTVEDRIAELLVRKRELADAVL 593 >gi|282898570|ref|ZP_06306558.1| SNF2-related helicase [Cylindrospermopsis raciborskii CS-505] gi|281196438|gb|EFA71347.1| SNF2-related helicase [Cylindrospermopsis raciborskii CS-505] Length = 1427 Score = 132 bits (333), Expect = 2e-29, Method: Composition-based stats. Identities = 31/210 (14%), Positives = 74/210 (35%), Gaps = 25/210 (11%) Query: 4 YHKFQRELYCDLQGENIEA----FNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKAL 59 Y +R+ L + + ++ ++ + + K++ L Sbjct: 1208 YEALRRQAISKLNESDADPGKKHLQVLAEIMRLRRACCNPSLVMPNTD---LSSSKLQLL 1264 Query: 60 EVIIEKA--NAAPIIVAYHFNSDLARLQ----------KAFPQGRTLDKDPCTIQEWNEG 107 ++ + N +V F L ++ + + + ++ + G Sbjct: 1265 GEVLAELLENHHKALVFSQFVDHLHIIRNYLESKSIKYQYLDGSTPMAERKRSVDSFQAG 1324 Query: 108 KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFV 167 + + G GLNL + ++ WW+ Q +R + G +R V + Sbjct: 1325 DGDIFLISLKAGGTGLNLT-AADYVIHTDPWWNPAVEDQASDR-----AHRIGQQRPVTI 1378 Query: 168 YYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 Y L+A++TI++ +++ K + D LL Sbjct: 1379 YRLVAKDTIEDKIVELHHHKRDLADTLLEG 1408 >gi|306829829|ref|ZP_07463016.1| Snf2 family protein [Streptococcus mitis ATCC 6249] gi|304427840|gb|EFM30933.1| Snf2 family protein [Streptococcus mitis ATCC 6249] Length = 1031 Score = 132 bits (333), Expect = 2e-29, Method: Composition-based stats. Identities = 39/208 (18%), Positives = 81/208 (38%), Gaps = 25/208 (12%) Query: 9 RELYCDLQGENI--EAFNSASKTVKCLQLA-NGAVYYDEEKHWKEVHDEKIKALEVII-- 63 RE + + S ++ Q+ A++ D+ + K+ +L ++ Sbjct: 815 RERLAQVTDQEFQRSRVEILSGLMRLRQICDTPALFMDD----YQGASGKLDSLRDLLLQ 870 Query: 64 EKANAAPIIVAYHFNSDLARLQKAFPQ---------GRTLDKDPCTI-QEWNEGKIPLLF 113 +++ F L ++++ P G T +D + + +N+G+ Sbjct: 871 VADGGHRVLIFSQFKGMLEKIEQELPDLGLTSFKITGSTPAQDRQEMTKAFNQGERDAFL 930 Query: 114 AHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQ 173 + G GLNL G + ++ LWW+ Q I R + G ++ V VY LI + Sbjct: 931 ISLKAGGVGLNLT-GADTVILVDLWWNPAVEAQAIGR-----AHRMGQEQKVEVYRLITK 984 Query: 174 NTIDELVLQRLRTKSTIQDLLLNALKKE 201 TI+E + + K + +L+ + Sbjct: 985 GTIEEKIQELQEQKKHLVSQVLDGTESR 1012 >gi|148548802|ref|YP_001268904.1| non-specific serine/threonine protein kinase [Pseudomonas putida F1] gi|148512860|gb|ABQ79720.1| Non-specific serine/threonine protein kinase [Pseudomonas putida F1] Length = 1105 Score = 132 bits (333), Expect = 2e-29, Method: Composition-based stats. Identities = 27/141 (19%), Positives = 59/141 (41%), Gaps = 14/141 (9%) Query: 68 AAPIIVAYHFNSDLARLQKAFPQGRTL--------DKDPCTIQEWNEGKIPLLFAHPASC 119 +++ F S LA +++ + + +Q++ +G+ + + Sbjct: 948 GRRVLLFSQFTSMLALIEQELEKRKIRYSLLTGDTRDRRTPVQQFQQGESEVFLISLKAG 1007 Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 G GLNL + ++ F WW+ Q +R + G + VFV+ LI + T++E Sbjct: 1008 GVGLNLT-AADTVIHFDPWWNPASENQATDR-----AYRIGQDKPVFVFKLITRGTVEEK 1061 Query: 180 VLQRLRTKSTIQDLLLNALKK 200 + + K+ + LL+ + Sbjct: 1062 IQLLQQEKAALAASLLDGGQA 1082 >gi|322377010|ref|ZP_08051503.1| Snf2 family protein [Streptococcus sp. M334] gi|321282817|gb|EFX59824.1| Snf2 family protein [Streptococcus sp. M334] Length = 1032 Score = 132 bits (333), Expect = 2e-29, Method: Composition-based stats. Identities = 36/208 (17%), Positives = 79/208 (37%), Gaps = 23/208 (11%) Query: 9 RELYCDLQGENI--EAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIE-- 64 R+ + + S ++ Q+ + + E+ + K+ +L ++ Sbjct: 816 RDRLSQVSDQEFQRSRVEILSGLMRLRQICDTPALFMED---YQGASGKLDSLRDLLVQV 872 Query: 65 KANAAPIIVAYHFNSDLARLQKAFPQ---------GRTLDKDPCTI-QEWNEGKIPLLFA 114 +++ F L ++++ P G T K+ + + +N+G+ Sbjct: 873 ADGGHRVLIFSQFKGMLEKIEQELPDLGMTSFKITGSTPAKERQDMTKAFNQGERDAFLI 932 Query: 115 HPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQN 174 + G GLNL G + ++ LWW+ Q I R + G + V VY L+ + Sbjct: 933 SLKAGGVGLNLT-GADTVILVDLWWNPAVEAQAIGR-----AHRMGQEETVEVYRLVTKG 986 Query: 175 TIDELVLQRLRTKSTIQDLLLNALKKET 202 TI+E + + K + +L+ + Sbjct: 987 TIEEKIQELQEQKKHLVSQVLDGTESRG 1014 >gi|307704453|ref|ZP_07641363.1| bacterial SNF2 helicase associated family protein [Streptococcus mitis SK597] gi|307621973|gb|EFO01000.1| bacterial SNF2 helicase associated family protein [Streptococcus mitis SK597] Length = 1032 Score = 132 bits (333), Expect = 2e-29, Method: Composition-based stats. Identities = 35/192 (18%), Positives = 75/192 (39%), Gaps = 21/192 (10%) Query: 23 FNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIE--KANAAPIIVAYHFNSD 80 S ++ Q+ + + E+ + K+ +L ++ +++ F Sbjct: 832 VEILSGLMRLRQICDTPALFMED---YQGASGKLDSLRDLLVQVADGGHRVLIFSQFKGM 888 Query: 81 LARLQKAFPQ---------GRTLDKDPCTI-QEWNEGKIPLLFAHPASCGHGLNLQYGGN 130 L ++++ P G T K+ + + +N+G+ + G GLNL G + Sbjct: 889 LEKIEQELPDLGLTSFKITGSTPAKERQDMTKAFNQGERDAFLISLKAGGVGLNLT-GAD 947 Query: 131 ILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 ++ LWW+ Q I R + G + V VY L+ + TI+E + + K + Sbjct: 948 TVILVDLWWNPAVEAQAIGR-----AHRMGQEETVEVYRLVTKGTIEEKIQELQEQKKHL 1002 Query: 191 QDLLLNALKKET 202 +L+ + Sbjct: 1003 VSQVLDGTESRG 1014 >gi|149013295|ref|ZP_01834053.1| Snf2 family protein, putative [Streptococcus pneumoniae SP19-BS75] gi|182684567|ref|YP_001836314.1| snf2 family protein [Streptococcus pneumoniae CGSP14] gi|303253977|ref|ZP_07340097.1| snf2 family protein [Streptococcus pneumoniae BS455] gi|303258546|ref|ZP_07344526.1| snf2 family protein [Streptococcus pneumoniae SP-BS293] gi|303262636|ref|ZP_07348576.1| snf2 family protein [Streptococcus pneumoniae SP14-BS292] gi|303263575|ref|ZP_07349497.1| snf2 family protein [Streptococcus pneumoniae BS397] gi|303266981|ref|ZP_07352856.1| snf2 family protein [Streptococcus pneumoniae BS457] gi|303269746|ref|ZP_07355498.1| snf2 family protein [Streptococcus pneumoniae BS458] gi|147762960|gb|EDK69906.1| Snf2 family protein, putative [Streptococcus pneumoniae SP19-BS75] gi|182629901|gb|ACB90849.1| snf2 family protein [Streptococcus pneumoniae CGSP14] gi|301802325|emb|CBW35079.1| SNF2 protein [Streptococcus pneumoniae INV200] gi|302599065|gb|EFL66091.1| snf2 family protein [Streptococcus pneumoniae BS455] gi|302636192|gb|EFL66687.1| snf2 family protein [Streptococcus pneumoniae SP14-BS292] gi|302640047|gb|EFL70502.1| snf2 family protein [Streptococcus pneumoniae SP-BS293] gi|302640716|gb|EFL71111.1| snf2 family protein [Streptococcus pneumoniae BS458] gi|302643498|gb|EFL73770.1| snf2 family protein [Streptococcus pneumoniae BS457] gi|302646613|gb|EFL76838.1| snf2 family protein [Streptococcus pneumoniae BS397] Length = 1048 Score = 132 bits (333), Expect = 2e-29, Method: Composition-based stats. Identities = 37/207 (17%), Positives = 78/207 (37%), Gaps = 23/207 (11%) Query: 9 RELYCDLQGENIE--AFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIE-- 64 +E+ I+ + + Q+ N + E+ + K+ +L +++ Sbjct: 836 QEMVSGASAYEIKRHKIEILAGLTRLRQICNTPALFLED---YKGDSGKMDSLFELLDTI 892 Query: 65 KANAAPIIVAYHFNSDLARLQKAFPQGR----------TLDKDPCTIQEWNEGKIPLLFA 114 + + ++ F S L +++ + DK + +N+G+ Sbjct: 893 REKGSRPLIFSQFTSMLDLIEQELEKKEMSHFKITGQTPSDKRQEMVNLFNQGEKDCFLI 952 Query: 115 HPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQN 174 + G GLNL G + ++ LWW+ Q I R + G + V VY LI Sbjct: 953 SLKAGGTGLNLT-GADTVILCDLWWNPAVEMQAIGR-----SHRLGQTKQVDVYRLITLG 1006 Query: 175 TIDELVLQRLRTKSTIQDLLLNALKKE 201 TI+E + + +K + + +L + Sbjct: 1007 TIEEKIQELQESKKELFNTVLEGQESR 1033 >gi|116672340|ref|YP_833273.1| SNF2-related protein [Arthrobacter sp. FB24] gi|116612449|gb|ABK05173.1| SNF2-related protein [Arthrobacter sp. FB24] Length = 1154 Score = 132 bits (333), Expect = 2e-29, Method: Composition-based stats. Identities = 44/211 (20%), Positives = 77/211 (36%), Gaps = 24/211 (11%) Query: 2 KQYH---KFQRELYCDL-QGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIK 57 K Y + +R+ L + N F QL+ A D V K+ Sbjct: 934 KVYQTHLQRERQKILGLIEDVNKNRFTIFQSLTLLRQLSLDASLVDPS--LSGVRSSKLD 991 Query: 58 ALEVIIEK--ANAAPIIVAYHFNSDL---------ARLQKAFPQGRTLDKDPCTIQEWNE 106 L +E A ++ F L +++ + G T ++ + E+ Sbjct: 992 VLFEQLEDLVAEGHRALIFSQFTGFLGKVRERLVEEKIEFCYLDGSTRNR-SDVVNEFKN 1050 Query: 107 GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVF 166 G P+ + G GLNL + + WW+ Q ++R + G R V Sbjct: 1051 GSAPVFLISLKAGGFGLNLTE-ADYVFLLDPWWNPASEAQAVDR-----THRIGQARNVM 1104 Query: 167 VYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 VY L+A++TI+E V+ KS + ++ Sbjct: 1105 VYRLVAKDTIEEKVMALKAKKSQLFADVMEG 1135 >gi|289168337|ref|YP_003446606.1| HepA, superfamily II DNA/RNA helicases, SNF2 family [Streptococcus mitis B6] gi|288907904|emb|CBJ22744.1| HepA, superfamily II DNA/RNA helicases, SNF2 family [Streptococcus mitis B6] Length = 1032 Score = 132 bits (333), Expect = 2e-29, Method: Composition-based stats. Identities = 36/208 (17%), Positives = 79/208 (37%), Gaps = 23/208 (11%) Query: 9 RELYCDLQGENI--EAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIE-- 64 R+ + + S ++ Q+ + + E+ + K+ +L ++ Sbjct: 816 RDRLAQVSDQEFQRSRVEILSGLMRLRQICDTPGLFMED---YQGASGKLDSLRDLLVQV 872 Query: 65 KANAAPIIVAYHFNSDLARLQKAFPQ---------GRTLDKDPCTI-QEWNEGKIPLLFA 114 +++ F L ++++ P G T K+ + + +N+G+ Sbjct: 873 ADGGHRVLIFSQFKGMLEKIEQELPDLGLTSFKITGSTPAKERQDMTKAFNQGERDAFLI 932 Query: 115 HPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQN 174 + G GLNL G + ++ LWW+ Q I R + G + V VY L+ + Sbjct: 933 SLKAGGVGLNLT-GADTVILVDLWWNPAVEAQAIGR-----AHRMGQEETVEVYRLVTRG 986 Query: 175 TIDELVLQRLRTKSTIQDLLLNALKKET 202 TI+E + + K + +L+ + Sbjct: 987 TIEEKIQELQEQKKHLVSQVLDGTESRG 1014 >gi|229084801|ref|ZP_04217060.1| Helicase, SWF/SNF [Bacillus cereus Rock3-44] gi|228698515|gb|EEL51241.1| Helicase, SWF/SNF [Bacillus cereus Rock3-44] Length = 1071 Score = 132 bits (333), Expect = 2e-29, Method: Composition-based stats. Identities = 44/214 (20%), Positives = 81/214 (37%), Gaps = 29/214 (13%) Query: 2 KQYH----KFQRELYCDLQGENI--EAFNSASKTVKCLQLANGA-VYYDEEKHWKEVHDE 54 K Y K + E L + + + + Q+ ++ D+ K Sbjct: 848 KLYAAYLAKLREETLKHLDKDTLRKNKIRILAGLTRLRQICCHPGLFVDDYK----GSSA 903 Query: 55 KIKALEVIIEK--ANAAPIIVAYHFNSDLARL-----QKAFPQGRTLDKDPCTIQ----- 102 K + L I+E+ + I++ F L+ + ++A P P + Sbjct: 904 KFEQLLEIVEECRSTGKRILIFSQFTKMLSIIGRELNRQAIPYFYLDGNTPSAERVELCN 963 Query: 103 EWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFK 162 +NEG+ L + G GLNL G + ++ + LWW+ QQ +R + G K Sbjct: 964 RFNEGEGDLFLISLKAGGTGLNLT-GADTVILYDLWWNPAVEQQAADR-----AYRMGQK 1017 Query: 163 RAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 V V L+A TI+E + + K + ++ Sbjct: 1018 NTVQVIKLVAHGTIEEKMNELQENKKHLIAEVIE 1051 >gi|315648297|ref|ZP_07901398.1| SNF2-related protein [Paenibacillus vortex V453] gi|315276943|gb|EFU40286.1| SNF2-related protein [Paenibacillus vortex V453] Length = 1109 Score = 132 bits (333), Expect = 2e-29, Method: Composition-based stats. Identities = 38/183 (20%), Positives = 73/183 (39%), Gaps = 21/183 (11%) Query: 26 ASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLAR 83 + + Q+ + E E K + L IE+ ++V F L Sbjct: 914 LAGITRLRQICCHPALFVEG---YEGSSAKFEQLLETIEECRLAGRRMLVFSQFTGMLKL 970 Query: 84 LQKA---------FPQGRTLDKDPCTI-QEWNEGKIPLLFAHPASCGHGLNLQYGGNILV 133 + + G+T + + + +NEG+ + + G GLNL G + ++ Sbjct: 971 IAGELGYRGIPSFYLDGQTPSAERVELCERFNEGEREVFLISLKAGGTGLNLT-GADTVI 1029 Query: 134 FFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDL 193 + LWW+ QQ +R + G K+ V V L+AQ+TI++ + + K + + Sbjct: 1030 LYDLWWNPAVEQQATDR-----AHRIGQKKVVQVIRLVAQDTIEDKMYALQQKKKNLIEE 1084 Query: 194 LLN 196 L+ Sbjct: 1085 LVQ 1087 >gi|172057599|ref|YP_001814059.1| non-specific serine/threonine protein kinase [Exiguobacterium sibiricum 255-15] gi|171990120|gb|ACB61042.1| Non-specific serine/threonine protein kinase [Exiguobacterium sibiricum 255-15] Length = 876 Score = 132 bits (333), Expect = 2e-29, Method: Composition-based stats. Identities = 39/192 (20%), Positives = 80/192 (41%), Gaps = 21/192 (10%) Query: 26 ASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLAR 83 + + Q+ + E+ K++ L +IE+ A I++ + LAR Sbjct: 676 LAGLTRLRQICCDPALFVEDYT---GESTKLERLLTLIEEKLAAGHRILIFSQYTKMLAR 732 Query: 84 LQKAF---------PQGRTLDKDPCTI-QEWNEGKIPLLFAHPASCGHGLNLQYGGNILV 133 +++ G T +D + + +N G++ L + G GLNL + ++ Sbjct: 733 IRERLAAQQRAHFLLTGETPVEDRVALCERFNAGEVDLFLISLKAGGTGLNL-ATADTVI 791 Query: 134 FFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDL 193 + WW+ QQ +R + G + V V L+ TI+E + + K+T+ D Sbjct: 792 LYDSWWNPAVEQQAADR-----AHRLGQQSPVEVIKLLMTGTIEEKMAELQDRKATMIDA 846 Query: 194 LLNALKKETIHV 205 +L+ K + + + Sbjct: 847 VLSDQKPDILTI 858 >gi|313499735|gb|ADR61101.1| Non-specific serine/threonine protein kinase [Pseudomonas putida BIRD-1] Length = 1110 Score = 132 bits (333), Expect = 2e-29, Method: Composition-based stats. Identities = 27/141 (19%), Positives = 59/141 (41%), Gaps = 14/141 (9%) Query: 68 AAPIIVAYHFNSDLARLQKAFPQGRTL--------DKDPCTIQEWNEGKIPLLFAHPASC 119 +++ F S LA +++ + + +Q++ +G+ + + Sbjct: 948 GRRVLLFSQFTSMLALIEQELEKRKIRYSLLTGDTRDRRTPVQQFQQGESEVFLISLKAG 1007 Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 G GLNL + ++ F WW+ Q +R + G + VFV+ LI + T++E Sbjct: 1008 GVGLNLT-AADTVIHFDPWWNPASENQATDR-----AYRIGQDKPVFVFKLITRGTVEEK 1061 Query: 180 VLQRLRTKSTIQDLLLNALKK 200 + + K+ + LL+ + Sbjct: 1062 IQLLQQEKAALAASLLDGGQA 1082 >gi|315122947|ref|YP_004064953.1| DNA helicase [Pseudoalteromonas sp. SM9913] gi|315016707|gb|ADT70044.1| DNA helicase [Pseudoalteromonas sp. SM9913] Length = 1058 Score = 132 bits (333), Expect = 2e-29, Method: Composition-based stats. Identities = 43/198 (21%), Positives = 74/198 (37%), Gaps = 24/198 (12%) Query: 10 ELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEV---IIEKA 66 +L+ + QG +K Q+ + E E K++ L ++ Sbjct: 852 DLFAE-QGVQKSKLAFLEALLKLRQICCHPKLIEPE---TEAASAKLEWLSSHLPLMLSL 907 Query: 67 NAAPIIVAYHFNSDLARLQKA---------FPQGRTLDKDPCTIQEWNEGKIPLLFAHPA 117 +I+ F S L + + G+T +D I E+ G + Sbjct: 908 -GRKVIIFSQFTSALDLIAERLNELNINFSMLTGQTRHRD-KVIDEFTSGNTSVFLISLK 965 Query: 118 SCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 + G GLNL + ++ F WW+ +Q +R + G VFVY LI N+I+ Sbjct: 966 AGGTGLNLTQ-ADTVIHFDPWWNPAVEKQATDR-----AYRIGQTNPVFVYKLIMANSIE 1019 Query: 178 ELVLQRLRTKSTIQDLLL 195 + V Q + K + D L Sbjct: 1020 QKVFQMQQDKQALVDALF 1037 >gi|73540253|ref|YP_294773.1| SNF2-related:helicase, C-terminal [Ralstonia eutropha JMP134] gi|72117666|gb|AAZ59929.1| SNF2-related:Helicase, C-terminal [Ralstonia eutropha JMP134] Length = 988 Score = 132 bits (333), Expect = 3e-29, Method: Composition-based stats. Identities = 36/186 (19%), Positives = 70/186 (37%), Gaps = 21/186 (11%) Query: 24 NSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDL 81 + ++ ++ + A A E K++ + + AN ++V F L Sbjct: 788 HVLAQLMRLRRAACDARLVTPE---VGQAGAKVRTFVDLAGELAANGHKVLVFSQFVDFL 844 Query: 82 ARLQKAFPQGRTL----------DKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNI 131 L++ Q + + + G+ + + G GLNL + Sbjct: 845 QLLRQGIEQAGLALQYLDGATPAAERTRRVAAFQAGEGDVFLISLKAGGFGLNLT-AADY 903 Query: 132 LVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQ 191 ++ WW+ Q + R + G +R V VY LI TI+E +++ + K + Sbjct: 904 VIIADPWWNPAAEDQAMGR-----AHRIGQQRPVTVYRLITAGTIEERIVELHKDKRALA 958 Query: 192 DLLLNA 197 D LL+A Sbjct: 959 DGLLDA 964 >gi|262200392|ref|YP_003271600.1| SNF2-like protein [Gordonia bronchialis DSM 43247] gi|262083739|gb|ACY19707.1| SNF2-related protein [Gordonia bronchialis DSM 43247] Length = 1159 Score = 132 bits (333), Expect = 3e-29, Method: Composition-based stats. Identities = 41/211 (19%), Positives = 73/211 (34%), Gaps = 24/211 (11%) Query: 2 KQYH---KFQRELYCDLQGE-NIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVH--DEK 55 K Y +R+ L G+ F QL+ A D D Sbjct: 938 KIYDTRLARERQKVLGLLGDWEKNRFQVFRSLSMLRQLSLHAALVDSSHDSVNSAKVDYL 997 Query: 56 IKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTL----------DKDPCTIQEWN 105 I+ L ++++ +V F L L+ + + +Q + Sbjct: 998 IEQLPGLVDE--GHSSLVFSQFTGFLDILRAHLDAEGIVYSYLDGSMSAKQRAAAVQRFR 1055 Query: 106 EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 G + + G GLNL V WW+ Q ++R + G +R V Sbjct: 1056 SGAAQVFLISLKAGGFGLNLTEADYCFV-CDPWWNPAAEAQAVDR-----AHRIGQQRPV 1109 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 VY L++ +TI+E V++ K + D +++ Sbjct: 1110 NVYRLVSADTIEERVVRLQERKRALFDAVVD 1140 >gi|89095677|ref|ZP_01168571.1| hypothetical protein B14911_03069 [Bacillus sp. NRRL B-14911] gi|89089423|gb|EAR68530.1| hypothetical protein B14911_03069 [Bacillus sp. NRRL B-14911] Length = 942 Score = 132 bits (333), Expect = 3e-29, Method: Composition-based stats. Identities = 38/212 (17%), Positives = 81/212 (38%), Gaps = 23/212 (10%) Query: 3 QYHKFQRELYCDLQG--ENIEAFNSASKTVKCLQLANG-AVYYDEEKHWKEVH-DEKIKA 58 Y + ++ + +++ + QL N A+Y EEK + K++ Sbjct: 718 LYEQLVKDTFAEIEKLSGFERKGLILQLLSRLKQLCNHPALYLKEEKPSHLLERSSKLEK 777 Query: 59 LEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQ-----------GRTLDKDPCTIQEWN 105 L +++ ++ + +QK + + ++ I + Sbjct: 778 LNELVDAVLEQEESCLIFTQYIEMGHMIQKIMKKRHGIDVPFLNGSVSKNERDRMITRFQ 837 Query: 106 EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 +G+ P+ + G GLNL N ++ + WW+ Q +R + G +R V Sbjct: 838 DGEFPVFLLSLKAGGTGLNLT-AANHVIHYDRWWNPAVENQATDR-----AYRIGQERFV 891 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 V+ LI T++E + L K T+ D ++ + Sbjct: 892 HVHKLICTGTLEEKIDLMLEKKQTLNDQVIQS 923 >gi|12719426|ref|NP_075497.1| hypothetical protein phiSLTp35 [Staphylococcus phage phiSLT] gi|12697856|dbj|BAB21728.1| unnamed protein product [Staphylococcus phage phiSLT] Length = 116 Score = 132 bits (333), Expect = 3e-29, Method: Composition-based stats. Identities = 45/116 (38%), Positives = 65/116 (56%), Gaps = 6/116 (5%) Query: 90 QGRTLDKDPCTIQE-WNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMI 148 + L+KD + WN G I LL AHPAS GHGLNLQ GG+I+V+F L W LE +QQ Sbjct: 4 KLNELEKDSKAKERRWNSGDIKLLIAHPASAGHGLNLQQGGHIIVWFGLTWSLELYQQAN 63 Query: 149 ERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIH 204 R+ + G +++++ NTID+ V + L+ K Q+ L+ A+K Sbjct: 64 ARL-----YRQGQNHTTIIHHIMTDNTIDQKVYEALQNKELTQEELMKAIKARIAK 114 >gi|323350997|ref|ZP_08086654.1| Snf2 family protein [Streptococcus sanguinis VMC66] gi|322122721|gb|EFX94430.1| Snf2 family protein [Streptococcus sanguinis VMC66] Length = 1033 Score = 132 bits (332), Expect = 3e-29, Method: Composition-based stats. Identities = 38/215 (17%), Positives = 84/215 (39%), Gaps = 24/215 (11%) Query: 1 MKQYHKFQRELYCDLQGENIE--AFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKA 58 + + ++ + I S ++ Q+ + + E+ E K+++ Sbjct: 812 LAMLKQM-QDRIIHATEDEINRSKIEILSGLMRLRQICDTPKLFMED---YEGESGKLES 867 Query: 59 LEVIIEKANA--APIIVAYHFNSDLARLQKAFPQ---------GRTLDKDPCTIQ-EWNE 106 L ++E+ +++ F L ++ + G T K+ + +N+ Sbjct: 868 LRELLEQIQDGNRRVLIFSQFRGMLDIIESELDKMGMESFKITGSTPAKERQDMTTAFND 927 Query: 107 GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVF 166 G+ + G GLNL G + ++ LWW+ Q I R + G +R V Sbjct: 928 GQRSAFLISLKAGGVGLNLT-GADTVILVDLWWNPAVEAQAIGR-----AHRIGQERNVE 981 Query: 167 VYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 VY +I + TI+E + + +K + +L+ + + Sbjct: 982 VYRMITRGTIEEKIQELQESKRNLVSTILDGAEAK 1016 >gi|253573733|ref|ZP_04851076.1| non-specific serine/threonine protein kinase [Paenibacillus sp. oral taxon 786 str. D14] gi|251847261|gb|EES75266.1| non-specific serine/threonine protein kinase [Paenibacillus sp. oral taxon 786 str. D14] Length = 1111 Score = 132 bits (332), Expect = 3e-29, Method: Composition-based stats. Identities = 40/212 (18%), Positives = 81/212 (38%), Gaps = 27/212 (12%) Query: 2 KQY----HKFQRELYCDLQGENI--EAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEK 55 K Y K Q+E L + + + QL + + + K Sbjct: 888 KLYLAYLAKLQQETLKHLDADTFGQNRIRILAGLTRLRQLCCHPALFVDG---YDGGSAK 944 Query: 56 IKALEVIIEK--ANAAPIIVAYHFNSDLARLQKA---------FPQGRTLDKDPCTI-QE 103 L +IE+ + +++ F L + + + G+T + + Sbjct: 945 FDQLMEMIEECQSAGKRVLIFSQFTEMLGLIGRELGYRGLPFFYLDGKTPAAERVELCSR 1004 Query: 104 WNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKR 163 +N+G+ L + G GLNL G + ++ + LWW+ QQ +R + G K Sbjct: 1005 FNDGERDLFLISLKAGGTGLNLT-GADTVILYDLWWNPAVEQQAADR-----AYRIGQKN 1058 Query: 164 AVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 V V ++AQ T+++ + + + K + + +L Sbjct: 1059 IVHVIRMVAQGTVEDKMYELQQKKKHLVEEVL 1090 >gi|261368900|ref|ZP_05981783.1| SNF2 family protein [Subdoligranulum variabile DSM 15176] gi|282568998|gb|EFB74533.1| SNF2 family protein [Subdoligranulum variabile DSM 15176] Length = 811 Score = 132 bits (332), Expect = 3e-29, Method: Composition-based stats. Identities = 34/184 (18%), Positives = 79/184 (42%), Gaps = 20/184 (10%) Query: 32 CLQLANGAVYYDEEKHWK-EVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQKAF 88 + + D+ + + V K+ AL++++ + I++ ++ S L +++ Sbjct: 622 LRECCCHPLLLDDTINVEGVVDSCKLDALKILVADLFESGHKILIFSNYTSMLHLIRQEL 681 Query: 89 PQGRTLD-----------KDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSL 137 + + ++++ + + + G GLNL ++++ + Sbjct: 682 EKRSEYKANLFYLDGKTQQRNLLVEQFEKASAGIFLISIKAGGVGLNLTSAQDVII-YDP 740 Query: 138 WWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 WW+ QQ I+R + G ++AV VY L+A NTI+E +L + K + L+N Sbjct: 741 WWNPFVEQQAIDR-----AYRIGQQQAVNVYKLVAANTIEEKILDMQKDKEQDFEELING 795 Query: 198 LKKE 201 + + Sbjct: 796 ISTD 799 >gi|302874211|ref|YP_003842844.1| SNF2-related protein [Clostridium cellulovorans 743B] gi|307689525|ref|ZP_07631971.1| SNF2-related protein [Clostridium cellulovorans 743B] gi|302577068|gb|ADL51080.1| SNF2-related protein [Clostridium cellulovorans 743B] Length = 1078 Score = 132 bits (332), Expect = 3e-29, Method: Composition-based stats. Identities = 43/214 (20%), Positives = 83/214 (38%), Gaps = 29/214 (13%) Query: 2 KQYHKFQRELYCDLQGENIEA------FNSASKTVKCLQLANG-AVYYDEEKHWKEVHDE 54 K Y + + + +L E E + + Q+ A + D+ K Sbjct: 853 KLYFAYVKHIQGELDDEVKEKGFNNSKIKILAALTRLRQICCDPASFLDDYK----GGSG 908 Query: 55 KIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTLDK----------DPCTIQ 102 K +AL ++ + A +++ F S L ++K + + K + Sbjct: 909 KYEALSEVLAEVLAGNHKVLLFSQFTSVLKNIEKLLTKNKITYKYLDGSTKSQERLKIVD 968 Query: 103 EWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFK 162 E+N + + G GLNL G ++++ F WW+ Q +R + G K Sbjct: 969 EFNNDDSQVFLISLKAGGTGLNLT-GADVVIHFDPWWNPSVENQATDR-----AHRIGQK 1022 Query: 163 RAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 V V LI++ TI+E + + R K+ + +L+ Sbjct: 1023 NTVEVIKLISKGTIEEKIEKLQRKKTEVIKNVLD 1056 >gi|327474515|gb|EGF19920.1| Snf2 family protein [Streptococcus sanguinis SK408] Length = 1033 Score = 132 bits (332), Expect = 3e-29, Method: Composition-based stats. Identities = 38/215 (17%), Positives = 84/215 (39%), Gaps = 24/215 (11%) Query: 1 MKQYHKFQRELYCDLQGENIE--AFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKA 58 + + ++ + I S ++ Q+ + + E+ E K+++ Sbjct: 812 LALLKQM-QDRIIHATEDEINRSKIEILSGLMRLRQICDTPKLFMED---YEGESGKLES 867 Query: 59 LEVIIEKANA--APIIVAYHFNSDLARLQKAFPQ---------GRTLDKDPCTIQ-EWNE 106 L ++E+ +++ F L ++ + G T K+ + +N+ Sbjct: 868 LRELLEQIQDGNRRVLIFSQFRGMLDIIENELDKLGMESFKITGSTPAKERQDMTTAFND 927 Query: 107 GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVF 166 G+ + G GLNL G + ++ LWW+ Q I R + G +R V Sbjct: 928 GQRSAFLISLKAGGVGLNLT-GADTVILVDLWWNPAVEAQAIGR-----AHRIGQERNVE 981 Query: 167 VYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 VY +I + TI+E + + +K + +L+ + + Sbjct: 982 VYRMITRGTIEEKIQELQESKRNLVSTILDGAEAK 1016 >gi|182416600|ref|ZP_02948017.1| SWF/SNF family helicase [Clostridium butyricum 5521] gi|237669036|ref|ZP_04529020.1| Non-specific serine/threonine protein kinase [Clostridium butyricum E4 str. BoNT E BL5262] gi|182379558|gb|EDT77042.1| SWF/SNF family helicase [Clostridium butyricum 5521] gi|237657384|gb|EEP54940.1| Non-specific serine/threonine protein kinase [Clostridium butyricum E4 str. BoNT E BL5262] Length = 1077 Score = 132 bits (332), Expect = 3e-29, Method: Composition-based stats. Identities = 43/208 (20%), Positives = 77/208 (37%), Gaps = 24/208 (11%) Query: 4 YHKFQRELY---CDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 Y ++ + L + S K Q+ + + KI AL Sbjct: 857 YAEYAKNLIQKKVESDEFKKSKIEILSYVTKLRQICLDPSVIMDNYN---GTSGKIDALI 913 Query: 61 VIIEKA--NAAPIIVAYHFNSDLARLQ---------KAFPQGR-TLDKDPCTIQEWNEGK 108 ++E++ ++V F S L + + G T + + E+N+G Sbjct: 914 ELLEQSIEGDHKVLVFSQFTSVLKNISTILKENNMSYCYLDGSMTSSERMKMVNEFNDGN 973 Query: 109 IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVY 168 + + G GLNL +I++ F WW+ Q +R + G K V V Sbjct: 974 KNIFLISLKAGGTGLNLT-SADIVIHFDPWWNPAVEDQATDR-----AHRLGQKNVVEVI 1027 Query: 169 YLIAQNTIDELVLQRLRTKSTIQDLLLN 196 LIA TI+E ++ +K + D +L+ Sbjct: 1028 KLIASGTIEEKIIDLQNSKRELIDKVLS 1055 >gi|194397845|ref|YP_002038154.1| SNF2 family protein [Streptococcus pneumoniae G54] gi|194357512|gb|ACF55960.1| SNF2 family protein [Streptococcus pneumoniae G54] Length = 1032 Score = 132 bits (332), Expect = 3e-29, Method: Composition-based stats. Identities = 36/208 (17%), Positives = 79/208 (37%), Gaps = 23/208 (11%) Query: 9 RELYCDLQGENI--EAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIE-- 64 R+ + + S ++ Q+ + + E+ + K+ +L ++ Sbjct: 816 RDHLAQVSEQEFQRSRVEIXSGLMRLRQICDTPALFMED---YQGASGKLDSLRDLLVQV 872 Query: 65 KANAAPIIVAYHFNSDLARLQKAFPQ---------GRTLDKDPCTI-QEWNEGKIPLLFA 114 +++ F L ++++ P G T K+ + + +N+G+ Sbjct: 873 ADGGHRVLIFSQFKGMLEKIEQELPDLGLTSFKITGSTPAKERQDMTKAFNQGERDAFLI 932 Query: 115 HPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQN 174 + G GLNL G + ++ LWW+ Q I R + G + V VY L+ + Sbjct: 933 SLKAGGVGLNLT-GADTVILVDLWWNPAVEAQAIGR-----AHRMGQEETVEVYRLVTKG 986 Query: 175 TIDELVLQRLRTKSTIQDLLLNALKKET 202 TI+E + + K + +L+ + Sbjct: 987 TIEEKIQELQEQKKHLVSQVLDGTESRG 1014 >gi|57651290|ref|YP_185255.1| hypothetical protein SACOL0363 [Staphylococcus aureus subsp. aureus COL] gi|57285476|gb|AAW37570.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus COL] Length = 116 Score = 132 bits (332), Expect = 3e-29, Method: Composition-based stats. Identities = 45/116 (38%), Positives = 65/116 (56%), Gaps = 6/116 (5%) Query: 90 QGRTLDKDPCTIQE-WNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMI 148 + L+KD + WN G I LL AHPAS GHGLNLQ GG+I+V+F L W LE +QQ Sbjct: 4 KLNELEKDSKAKERRWNSGDIKLLIAHPASAGHGLNLQQGGHIIVWFGLTWSLELYQQAN 63 Query: 149 ERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIH 204 R+ + G +++++ NTID+ V + L+ K Q+ L+ A+K Sbjct: 64 ARL-----YRQGQNHTTIIHHIMTDNTIDQRVYKALQNKELTQEELMKAIKARIAK 114 >gi|325687137|gb|EGD29160.1| Snf2 family protein [Streptococcus sanguinis SK72] Length = 1033 Score = 132 bits (332), Expect = 3e-29, Method: Composition-based stats. Identities = 38/215 (17%), Positives = 83/215 (38%), Gaps = 24/215 (11%) Query: 1 MKQYHKFQRELYCDLQGENIE--AFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKA 58 + + ++ + I S ++ Q+ + + E+ E K+++ Sbjct: 812 LALLKQM-QDRIIHATEDEINRSKIEILSGLMRLRQICDTPKLFMED---YEGESGKLES 867 Query: 59 LEVIIEKANA--APIIVAYHFNSDLARLQKAFPQ---------GRTLDKDPCTIQ-EWNE 106 L + E+ +++ F L ++ + G T K+ + +N+ Sbjct: 868 LRELFEQIQDGNRRVLIFSQFRGMLDIIENELDKLGMDSFKITGSTPAKERQDMTTAFND 927 Query: 107 GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVF 166 G+ + G GLNL G + ++ LWW+ Q I R + G +R V Sbjct: 928 GQRSAFLISLKAGGVGLNLT-GADTVILVDLWWNPAVEAQAIGR-----AHRIGQERNVE 981 Query: 167 VYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 VY +I + TI+E + + +K + +L+ + + Sbjct: 982 VYRMITRGTIEEKIQELQESKRNLVSTILDGAEAK 1016 >gi|318057744|ref|ZP_07976467.1| helicase [Streptomyces sp. SA3_actG] Length = 939 Score = 132 bits (332), Expect = 3e-29, Method: Composition-based stats. Identities = 40/210 (19%), Positives = 74/210 (35%), Gaps = 23/210 (10%) Query: 3 QYHKFQRELYCDLQGENIEAFNSASK--TVKCLQLANG-AVYYDEEKHWKEVH--DEKIK 57 Y RE ++ + Q+ N A Y E + K+ Sbjct: 710 LYEAVVRESLAAIESAEGMSRRGLVLRLITSLKQICNHPAQYLKEHPDTARLPGRSGKLD 769 Query: 58 ALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFP----------QGRTLDKDPCTIQEWN 105 AL+ ++ A ++V + L G +D + + Sbjct: 770 ALDELLGTILAEDGSVLVFTQYVRMARLLTAHLAAQAVPAGLLHGGTPVDARDQLVDRFQ 829 Query: 106 EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 G +P+L + G GLNL G+ +V + WW+ Q +R + G R V Sbjct: 830 SGALPVLVLSLKAAGTGLNLTRAGH-VVHYDRWWNPAVEDQATDR-----AHRIGQTRHV 883 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 V+ L+A+ T+++ + + K + D +L Sbjct: 884 QVHRLLAEGTVEDRIADLVAGKQALADAVL 913 >gi|327490072|gb|EGF21860.1| Snf2 family protein [Streptococcus sanguinis SK1058] Length = 1033 Score = 132 bits (332), Expect = 3e-29, Method: Composition-based stats. Identities = 38/215 (17%), Positives = 85/215 (39%), Gaps = 24/215 (11%) Query: 1 MKQYHKFQRELYCDLQGENIE--AFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKA 58 + + ++ + I S ++ Q+ + + E+ E K+++ Sbjct: 812 LAMLKQM-QDRIIHATEDEINRSKIEILSGLMRLRQICDTPKLFMED---YEGESGKLES 867 Query: 59 LEVIIEKANA--APIIVAYHFNSDLARLQKAFPQ---------GRTLDKDPCTIQ-EWNE 106 L ++E+ +++ F L ++ + G T K+ + +N+ Sbjct: 868 LRELLEQIQDGNRRVLIFSQFRGMLDIIESELDKMGMESFKITGSTPAKERQDMTTAFND 927 Query: 107 GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVF 166 G+ + G GLNL G + ++ LWW+ Q I R + G +R V Sbjct: 928 GQRSAFLISLKAGGVGLNLT-GADTVILVDLWWNPAVEAQAIGR-----AHRIGQERNVE 981 Query: 167 VYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 VY +I + TI+E + + +K + ++L+ + + Sbjct: 982 VYRMITRGTIEEKIQELQESKRNLVSIILDGAEAK 1016 >gi|77361926|ref|YP_341500.1| DNA helicase [Pseudoalteromonas haloplanktis TAC125] gi|76876837|emb|CAI89054.1| putative DNA helicase with SNF2 domain [Pseudoalteromonas haloplanktis TAC125] Length = 1048 Score = 132 bits (332), Expect = 3e-29, Method: Composition-based stats. Identities = 37/178 (20%), Positives = 67/178 (37%), Gaps = 21/178 (11%) Query: 29 TVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQK 86 +K Q+ + + K++ L + +I+ F S L + + Sbjct: 860 LLKLRQICCHPKLIEPT---TQAGSAKLEWLSNRLPLMLSLGRKVIIFSQFTSALDLIAE 916 Query: 87 AFPQ---------GRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSL 137 + G+T +D I E+ G + + G GLNL + ++ + Sbjct: 917 RLKEININFSLLTGQTRQRD-KVIDEFTSGATSVFLISLKAGGTGLNLTQ-ADTVIHYDP 974 Query: 138 WWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 WW+ +Q +R + G VFVY LI N+I+E V + + K + D L Sbjct: 975 WWNPAVEKQATDR-----AYRIGQTNPVFVYKLIMANSIEEKVFKMQQDKQALVDALF 1027 >gi|47565536|ref|ZP_00236577.1| Snf2 family protein [Bacillus cereus G9241] gi|47557526|gb|EAL15853.1| Snf2 family protein [Bacillus cereus G9241] Length = 1064 Score = 132 bits (332), Expect = 3e-29, Method: Composition-based stats. Identities = 43/206 (20%), Positives = 81/206 (39%), Gaps = 25/206 (12%) Query: 6 KFQRELYCDLQGENI--EAFNSASKTVKCLQLANG-AVYYDEEKHWKEVHDEKIKALEVI 62 K + E L + + + + Q+ N A++ D+ K K + L I Sbjct: 849 KLREETLKHLDKDTLRKNKIRILAGLTRLRQICNHPALFVDDYK----GSSAKFEQLLDI 904 Query: 63 IEK--ANAAPIIVAYHFNSDLARL-----QKAFPQGRTLDKDPCTIQ-----EWNEGKIP 110 +E+ + I++ F L+ + ++A P P + +NEG+ Sbjct: 905 LEECRSTGKRILIFSQFTKMLSIIGRELNRQAIPYFYLDGNTPSQERVELCNRFNEGEGD 964 Query: 111 LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYL 170 L + G GLNL G + ++ + LWW+ QQ +R + G K V V L Sbjct: 965 LFLISLKAGGTGLNLT-GADTVILYDLWWNPAVEQQAADR-----AYRMGQKNTVQVIKL 1018 Query: 171 IAQNTIDELVLQRLRTKSTIQDLLLN 196 +A TI+ + + +K + ++ Sbjct: 1019 VAHGTIEGKMHELQESKKNLIAEVIE 1044 >gi|253700367|ref|YP_003021556.1| SNF2-related protein [Geobacter sp. M21] gi|251775217|gb|ACT17798.1| SNF2-related protein [Geobacter sp. M21] Length = 1386 Score = 132 bits (332), Expect = 3e-29, Method: Composition-based stats. Identities = 36/212 (16%), Positives = 74/212 (34%), Gaps = 27/212 (12%) Query: 3 QYHKFQRELYCDLQG-ENIEAFNSA-----SKTVKCLQLANGAVYYDEEKHWKEVHDEKI 56 Y ++ +L G +E ++ ++ + + + K+ Sbjct: 1165 LYEAIRKSALDNLAGVGKVEGKGELHLKILAEIMRLRRACCNPRLVLPDTP---IPSTKL 1221 Query: 57 KALEVIIEKA--NAAPIIVAYHFNSDLARLQKAFPQ----------GRTLDKDPCTIQEW 104 A I+E+ N +V F L +++ + + + + Sbjct: 1222 AAFGEIVEELRENRHKALVFSQFVGHLELIRQYVEKNGIPYQYLDGSTPPQERKRRVDAF 1281 Query: 105 NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA 164 G L + G GLNL + ++ WW+ Q +R + G KR Sbjct: 1282 QSGSGDLFLISLKAGGVGLNLT-AADYVIHMDPWWNPAVEDQASDR-----AHRIGQKRP 1335 Query: 165 VFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 V +Y L+ + TI+E ++ + K + D LL+ Sbjct: 1336 VTIYRLVTRGTIEEKIVGLHQQKRGLADSLLD 1367 >gi|261408135|ref|YP_003244376.1| SNF2-like protein [Paenibacillus sp. Y412MC10] gi|261284598|gb|ACX66569.1| SNF2-related protein [Paenibacillus sp. Y412MC10] Length = 1111 Score = 132 bits (332), Expect = 3e-29, Method: Composition-based stats. Identities = 36/183 (19%), Positives = 75/183 (40%), Gaps = 21/183 (11%) Query: 26 ASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLAR 83 + + Q+ + E E K++ L IE+ ++V F L Sbjct: 916 LAGITRLRQICCHPALFVEG---YEGGSAKLEQLLETIEECRLAGRRMLVFSQFTGMLNL 972 Query: 84 LQKA---------FPQGRTLDKDPCTI-QEWNEGKIPLLFAHPASCGHGLNLQYGGNILV 133 + + G+T + + + +NEG+ + + G GLNL G + ++ Sbjct: 973 IAGELGYRGIPFFYLDGQTPGSERVELCERFNEGEREVFLISLKAGGTGLNLT-GADTVI 1031 Query: 134 FFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDL 193 + LWW+ QQ ++R + G K+ V V ++Q+TI++ ++ + K + + Sbjct: 1032 LYDLWWNPAVEQQAMDR-----AHRIGQKKVVQVIRFVSQDTIEDKMVALQQKKKDLIEE 1086 Query: 194 LLN 196 L+ Sbjct: 1087 LVQ 1089 >gi|307706009|ref|ZP_07642832.1| bacterial SNF2 helicase associated family protein [Streptococcus mitis SK564] gi|307620428|gb|EFN99541.1| bacterial SNF2 helicase associated family protein [Streptococcus mitis SK564] Length = 1032 Score = 132 bits (332), Expect = 3e-29, Method: Composition-based stats. Identities = 36/208 (17%), Positives = 79/208 (37%), Gaps = 23/208 (11%) Query: 9 RELYCDLQGENI--EAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIE-- 64 R+ + + S ++ Q+ + + E+ + K+ +L ++ Sbjct: 816 RDRLAQVSDQEFQRSRVEILSGLMRLRQICDTPALFMED---YQGASGKLDSLRDLLVQV 872 Query: 65 KANAAPIIVAYHFNSDLARLQKAFPQ---------GRTLDKDPCTI-QEWNEGKIPLLFA 114 +++ F L ++++ P G T K+ + + +N+G+ Sbjct: 873 ADGGHRVLIFSQFKGMLEKVEQELPDLGMTSFKITGSTPAKERQDMTKAFNQGERDAFLI 932 Query: 115 HPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQN 174 + G GLNL G + ++ LWW+ Q I R + G + V VY L+ + Sbjct: 933 SLKAGGVGLNLT-GADTVILVDLWWNPAVEAQAISR-----AHRMGQEETVEVYRLVTKG 986 Query: 175 TIDELVLQRLRTKSTIQDLLLNALKKET 202 TI+E + + K + +L+ + Sbjct: 987 TIEEKIQELQEQKKHLVSQVLDGTESRG 1014 >gi|224367136|ref|YP_002601299.1| SWI/SNF helicase family protein [Desulfobacterium autotrophicum HRM2] gi|223689852|gb|ACN13135.1| SWI/SNF helicase family protein [Desulfobacterium autotrophicum HRM2] Length = 1392 Score = 132 bits (332), Expect = 3e-29, Method: Composition-based stats. Identities = 40/211 (18%), Positives = 71/211 (33%), Gaps = 25/211 (11%) Query: 3 QYHKFQRELYCDLQGENIEAFN----SASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKA 58 Y + + +++ ++ K QL + K+K Sbjct: 1171 LYEAHRLKAVENIEAAEDTPGQKHLRILAELTKLRQLCCNPSLVLPGTK---ITSSKLKV 1227 Query: 59 LEVIIEKA--NAAPIIVAYHFNSDLARLQKAFP---------QGRTL-DKDPCTIQEWNE 106 ++++ N +V F LA L+K G T + I + Sbjct: 1228 FGDMVDELLENNHKALVFSQFVGHLAILKKFLDAKKISYQYLDGSTRAGQRRERINAFQS 1287 Query: 107 GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVF 166 G L + G GLNL + ++ WW+ Q +R + G R V Sbjct: 1288 GVGELFLISLKAGGFGLNLT-AADYVIHMDPWWNPAVEDQASDR-----AYRIGQTRPVT 1341 Query: 167 VYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 VY L+ + +I+E +L R K + + LL Sbjct: 1342 VYRLVVKGSIEERILDLHREKRDLAESLLTG 1372 >gi|326798632|ref|YP_004316451.1| SNF2-related protein [Sphingobacterium sp. 21] gi|326549396|gb|ADZ77781.1| SNF2-related protein [Sphingobacterium sp. 21] Length = 1176 Score = 131 bits (331), Expect = 4e-29, Method: Composition-based stats. Identities = 42/212 (19%), Positives = 79/212 (37%), Gaps = 25/212 (11%) Query: 2 KQYHK----FQRELYCDLQGENIEAFN-SASKTVKCLQLANGAVYYDEEKHWKEVHDEKI 56 + Y K F+ EL ++ +A +K Q+ N K H K+ Sbjct: 954 RVYEKYLQYFRGELANKIEEGRDKATMFVLEALMKLRQICNSPAIL--PKETYPNHSSKL 1011 Query: 57 KALEV-IIEKANAAPIIVAYHFNSDL---------ARLQKAFPQGRTLD--KDPCTIQEW 104 + ++ I+EK +++ F S L + A+ G+T + + Sbjct: 1012 EEIQEHILEKTQGHKLLIFSSFTSMLGLLKIELEKMGIAYAYLDGKTSGEQRQQEVTRFQ 1071 Query: 105 NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA 164 + + + G GLNL + + WW+ Q I+R + G ++ Sbjct: 1072 EQDDCRVFLISLKAGGTGLNLT-AADYVYILDPWWNPAAEAQAIDRC-----YRIGQEKH 1125 Query: 165 VFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 V Y +I ++TI+E +L K + D L+ Sbjct: 1126 VMAYRMICKDTIEEKILNMQANKKALADSLIQ 1157 >gi|304406180|ref|ZP_07387837.1| SNF2 helicase associated domain protein [Paenibacillus curdlanolyticus YK9] gi|304344764|gb|EFM10601.1| SNF2 helicase associated domain protein [Paenibacillus curdlanolyticus YK9] Length = 1110 Score = 131 bits (331), Expect = 4e-29, Method: Composition-based stats. Identities = 39/213 (18%), Positives = 83/213 (38%), Gaps = 27/213 (12%) Query: 2 KQYH----KFQRELYCDLQGENI--EAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEK 55 K Y K ++E L ++ + + + Q+ + E+ K Sbjct: 887 KLYTAYLAKLRQETLKHLDEDDFGRQRIKILAGITRLRQICCHPGLFVED---YRGGSAK 943 Query: 56 IKALEVIIE--KANAAPIIVAYHFNSDLARLQKA---------FPQGRTLDKDPCTI-QE 103 ++ L I+E + +++ F L +++ + G T ++ + Q Sbjct: 944 LEQLLDIVEDCRGAGKRMLLFSQFTGMLGIIREELGVRGVPLFYLDGSTPPEERAELCQR 1003 Query: 104 WNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKR 163 +N G+ + + G GLNL G + ++ + +WW+ QQ +R + G K Sbjct: 1004 FNAGEKEVFLISLKAGGTGLNLT-GADTVIMYDMWWNPAVEQQAADR-----AHRIGQKN 1057 Query: 164 AVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 V V L+AQ T+++ + K + D ++ Sbjct: 1058 VVQVIRLVAQGTVEDKMHALQERKKQLIDEVIQ 1090 >gi|220914252|ref|YP_002489561.1| non-specific serine/threonine protein kinase [Arthrobacter chlorophenolicus A6] gi|219861130|gb|ACL41472.1| Non-specific serine/threonine protein kinase [Arthrobacter chlorophenolicus A6] Length = 1160 Score = 131 bits (331), Expect = 4e-29, Method: Composition-based stats. Identities = 43/211 (20%), Positives = 75/211 (35%), Gaps = 24/211 (11%) Query: 2 KQYH---KFQRELYCDL-QGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIK 57 K Y + +R+ L + N F QL+ D V K+ Sbjct: 940 KVYQTHLQRERQKILGLIEDVNKNRFTIFQSLTLLRQLSLDVSLVDPA--LSAVRSSKLD 997 Query: 58 ALEVIIEK--ANAAPIIVAYHFNS---------DLARLQKAFPQGRTLDKDPCTIQEWNE 106 L +E A ++ F D ++ + G T ++ + E+ Sbjct: 998 VLFEQLEDLVAEGHRALIFSQFTGFLGKVRERLDEEEIEYCYLDGGTRNR-ADVVSEFKN 1056 Query: 107 GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVF 166 G P+ + G GLNL + + WW+ Q ++R + G R V Sbjct: 1057 GSAPVFLISLKAGGFGLNLTE-ADYVFLLDPWWNPASEAQAVDR-----THRIGQARNVM 1110 Query: 167 VYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 VY L+A++TI+E V+ KS + ++ Sbjct: 1111 VYRLVAKDTIEEKVMALKTRKSQLFADVMEG 1141 >gi|322375571|ref|ZP_08050083.1| Snf2 family protein [Streptococcus sp. C300] gi|321279279|gb|EFX56320.1| Snf2 family protein [Streptococcus sp. C300] Length = 1031 Score = 131 bits (331), Expect = 4e-29, Method: Composition-based stats. Identities = 38/209 (18%), Positives = 80/209 (38%), Gaps = 25/209 (11%) Query: 9 RELYCDLQGENI--EAFNSASKTVKCLQLA-NGAVYYDEEKHWKEVHDEKIKALEVII-- 63 R+ + + S ++ Q+ A++ D+ + K+ +L ++ Sbjct: 815 RDRLAQVTDQEFQRSRVEILSGLMRLRQICDTPALFMDD----YQGASGKLDSLRDLLLQ 870 Query: 64 EKANAAPIIVAYHFNSDLARLQKAFPQ---------GRTLDKDPCTI-QEWNEGKIPLLF 113 +++ F L ++++ P G T D + + +N+G+ Sbjct: 871 VADGGHRVLIFSQFKGMLEKIEQELPDLGLTSFKITGSTPAHDRQEMTKAFNQGERDAFL 930 Query: 114 AHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQ 173 + G GLNL G + ++ LWW+ Q I R + G ++ V VY LI + Sbjct: 931 ISLKAGGVGLNLT-GADTVILVDLWWNPAVEAQAIGR-----AHRMGQEQKVEVYRLITK 984 Query: 174 NTIDELVLQRLRTKSTIQDLLLNALKKET 202 TI+E + + K + +L+ + Sbjct: 985 GTIEEKIQELQEQKKHLVSQVLDGTESRA 1013 >gi|299822681|ref|ZP_07054567.1| Snf2 family helicase [Listeria grayi DSM 20601] gi|299816210|gb|EFI83448.1| Snf2 family helicase [Listeria grayi DSM 20601] Length = 1063 Score = 131 bits (331), Expect = 4e-29, Method: Composition-based stats. Identities = 38/193 (19%), Positives = 74/193 (38%), Gaps = 21/193 (10%) Query: 16 QGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKA--NAAPIIV 73 Q + + + Q+ + + + K+ L I+ A N +++ Sbjct: 856 QDDETNRMKLLAGLTRLRQICCDPTLFVDG---YQGGSGKLLQLLDTIQTARENGKRMLI 912 Query: 74 AYHFNSDLARLQKAFPQ---------GRTLDKDP-CTIQEWNEGKIPLLFAHPASCGHGL 123 F S L +Q + G+T K+ + +NEG + + G GL Sbjct: 913 FSQFTSMLGIIQSELKKIGMEYFYMDGQTPSKERVNLVNAFNEGGKDIFLISLKAGGTGL 972 Query: 124 NLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQR 183 NL G + ++ + LWW+ +Q R + G K V V ++A+ TI+E + Sbjct: 973 NLT-GADTVILYDLWWNPAVEEQAASR-----AHRIGQKNVVQVIRMVAKGTIEERIFDL 1026 Query: 184 LRTKSTIQDLLLN 196 + K + D ++ Sbjct: 1027 QKKKQALIDDIIQ 1039 >gi|302533833|ref|ZP_07286175.1| SNF2/RAD54 family helicase [Streptomyces sp. C] gi|302442728|gb|EFL14544.1| SNF2/RAD54 family helicase [Streptomyces sp. C] Length = 645 Score = 131 bits (331), Expect = 4e-29, Method: Composition-based stats. Identities = 28/160 (17%), Positives = 68/160 (42%), Gaps = 18/160 (11%) Query: 53 DEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFP----------QGRTLDKDPCT 100 K+ L+ +++ A ++V + + L++ G + + Sbjct: 472 SGKLALLDELLDTILAEDGSVLVFTQYVTMARILERHLASRGIPSQLLHGGTPVPRREEL 531 Query: 101 IQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 + + G++P+ + G GLNL G+ ++ + WW+ +Q +R + G Sbjct: 532 VDRFQSGEVPVFLLSLKAAGTGLNLTRAGH-VIHYDRWWNPAVEEQATDR-----AYRIG 585 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKK 200 + V V+ +IA+ T+++ + + L K + D +L + + Sbjct: 586 QTQPVQVHRIIAEGTVEDRIAELLEAKRALADAVLGSGEA 625 >gi|255659992|ref|ZP_05405401.1| helicase, Snf2 family [Mitsuokella multacida DSM 20544] gi|260847745|gb|EEX67752.1| helicase, Snf2 family [Mitsuokella multacida DSM 20544] Length = 1078 Score = 131 bits (331), Expect = 4e-29, Method: Composition-based stats. Identities = 44/208 (21%), Positives = 81/208 (38%), Gaps = 23/208 (11%) Query: 1 MKQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 MK F RE+ GE + + Q+A + E K+ LE Sbjct: 862 MKSQRDFMREVSLASPGER--RIKILAILTRLRQIACDPALFLES---YHGGSGKLDMLE 916 Query: 61 VIIEKA--NAAPIIVAYHFNSDLARLQKAF----------PQGRTLDKDPCTIQEWNEGK 108 +IE+A +++ F + LA + + ++E+N G Sbjct: 917 ELIEEAIEGGHRLLIFSQFTTMLAHIAERLRRKGLAYFSLDGATPALTRMKLVREFNRGA 976 Query: 109 IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVY 168 +P+ + G GLNL G +++V F WW+ Q +R + G + V V+ Sbjct: 977 VPIFLISLKAGGTGLNLT-GADMVVHFDPWWNPAVEDQATDR-----AYRLGQRNNVQVF 1030 Query: 169 YLIAQNTIDELVLQRLRTKSTIQDLLLN 196 LI + T++E + + K ++ D ++ Sbjct: 1031 KLIMKGTVEEKIYELQEKKKSLIDQMIQ 1058 >gi|26554357|ref|NP_758291.1| helicase/SNF2 domain-containing protein [Mycoplasma penetrans HF-2] gi|26454367|dbj|BAC44695.1| helicase with SNF2 domain [Mycoplasma penetrans HF-2] Length = 1041 Score = 131 bits (331), Expect = 4e-29, Method: Composition-based stats. Identities = 35/211 (16%), Positives = 77/211 (36%), Gaps = 27/211 (12%) Query: 4 YHKFQRELYC---DLQGENIEAFNSA--SKTVKCLQLANGAVYYDEEKHWKEVHDEKIKA 58 Y + + ++ + I + S K Q+ E ++ K Sbjct: 819 YAELSKSQIAIRKGIEDKTINKQGAFIFSVLTKLRQICCSPKLSYENSD---INGSKFNL 875 Query: 59 LEVIIEKA--NAAPIIVAYHFNSDLARLQKAFPQGRT-----------LDKDPCTIQEWN 105 +I+ N I++ F S + + + + + ++ + N Sbjct: 876 CIDLIKDLIKNNDKILLFSQFTSMIDLIAQELKKLKINFLVLTGETNKKERMELVNEFNN 935 Query: 106 EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 + I + + G GL L N ++ + WW+L Q +R + G ++ V Sbjct: 936 KNNIKIFLISLKAGGTGLTLT-SANAVIHYDPWWNLSLENQATDR-----AHRIGQEKNV 989 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 F+Y LI +++I+E +L +K I + + + Sbjct: 990 FIYKLIVKDSIEEKILSLQESKREIINQIFD 1020 >gi|257867846|ref|ZP_05647499.1| Snf2 family protein [Enterococcus casseliflavus EC30] gi|257874174|ref|ZP_05653827.1| Snf2 family protein [Enterococcus casseliflavus EC10] gi|257801929|gb|EEV30832.1| Snf2 family protein [Enterococcus casseliflavus EC30] gi|257808338|gb|EEV37160.1| Snf2 family protein [Enterococcus casseliflavus EC10] Length = 1054 Score = 131 bits (331), Expect = 4e-29, Method: Composition-based stats. Identities = 39/209 (18%), Positives = 83/209 (39%), Gaps = 23/209 (11%) Query: 3 QYHKFQRELYCDLQGENI--EAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 Y + RE + + + + + Q+ + E+ E K++ ++ Sbjct: 832 AYLRQMREEIAQMDSTSFRKNRISILAGLTRLRQICCDPRLFVED---YEGSSGKLEQVK 888 Query: 61 VIIEKA--NAAPIIVAYHFNSDLARLQKAFPQ---------GRTLDKDP-CTIQEWNEGK 108 ++ A N +++ F S L+ +++ Q G T +D + +N G+ Sbjct: 889 DLLLAAKENGRRVLLFSQFTSMLSIIEEELAQEGFESFYLRGSTPPQDRLTMVDAFNSGE 948 Query: 109 IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVY 168 + + G GLNL G + ++ + LWW+ +Q R + G K V V+ Sbjct: 949 KDVFLISLKAGGTGLNLT-GADTVILYDLWWNPAVEEQAAGR-----AHRIGQKNVVEVW 1002 Query: 169 YLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 +IA+ TI+E + + K + ++ Sbjct: 1003 RMIAEGTIEERMDALQQEKRELFQKVIQG 1031 >gi|327462003|gb|EGF08332.1| Snf2 family protein [Streptococcus sanguinis SK1057] Length = 1033 Score = 131 bits (331), Expect = 4e-29, Method: Composition-based stats. Identities = 38/215 (17%), Positives = 84/215 (39%), Gaps = 24/215 (11%) Query: 1 MKQYHKFQRELYCDLQGENIE--AFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKA 58 + + ++ + I S ++ Q+ + + E+ E K+++ Sbjct: 812 LALLKQM-QDRIIHATEDEINRSKIEILSGLMRLRQICDTPKLFMED---YEGESGKLES 867 Query: 59 LEVIIEKANA--APIIVAYHFNSDLARLQKAFPQ---------GRTLDKDPCTIQ-EWNE 106 L ++E+ +++ F L ++ + G T K+ + +N+ Sbjct: 868 LRELLEQIQDGNRRVLIFSQFRGMLDIIESELDKLGMESFKITGSTPAKERQDMTTAFND 927 Query: 107 GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVF 166 G+ + G GLNL G + ++ LWW+ Q I R + G +R V Sbjct: 928 GQRSAFLISLKAGGVGLNLT-GADTVILVDLWWNPAVEAQAIGR-----AHRIGQERNVE 981 Query: 167 VYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 VY +I + TI+E + + +K + +L+ + + Sbjct: 982 VYRMITRGTIEEKIQELQESKRNLVSTILDGAEAK 1016 >gi|257876739|ref|ZP_05656392.1| Snf2 family protein [Enterococcus casseliflavus EC20] gi|257810905|gb|EEV39725.1| Snf2 family protein [Enterococcus casseliflavus EC20] Length = 1054 Score = 131 bits (331), Expect = 4e-29, Method: Composition-based stats. Identities = 39/209 (18%), Positives = 83/209 (39%), Gaps = 23/209 (11%) Query: 3 QYHKFQRELYCDLQGENI--EAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 Y + RE + + + + + Q+ + E+ E K++ ++ Sbjct: 832 AYLRQMREEIAQMDSTSFRKNRISILAGLTRLRQICCDPRLFVED---YEGSSGKLEQVK 888 Query: 61 VIIEKA--NAAPIIVAYHFNSDLARLQKAFPQ---------GRTLDKDP-CTIQEWNEGK 108 ++ A N +++ F S L+ +++ Q G T +D + +N G+ Sbjct: 889 DLLLAAKENGRRVLLFSQFTSMLSIIEEELAQEGFESFYLRGSTPPQDRLTMVDAFNSGE 948 Query: 109 IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVY 168 + + G GLNL G + ++ + LWW+ +Q R + G K V V+ Sbjct: 949 KDVFLISLKAGGTGLNLT-GADTVILYDLWWNPAVEEQAAGR-----AHRIGQKNVVEVW 1002 Query: 169 YLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 +IA+ TI+E + + K + ++ Sbjct: 1003 RMIAEGTIEERMDALQQEKRELFQKVIQG 1031 >gi|328946828|gb|EGG40965.1| Snf2 family protein [Streptococcus sanguinis SK1087] Length = 1033 Score = 131 bits (331), Expect = 4e-29, Method: Composition-based stats. Identities = 38/215 (17%), Positives = 84/215 (39%), Gaps = 24/215 (11%) Query: 1 MKQYHKFQRELYCDLQGENIE--AFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKA 58 + + ++ + I S ++ Q+ + + E+ E K+++ Sbjct: 812 LALLKQM-QDRIIHATEDEINRSKIEILSGLMRLRQICDTPKLFMED---YEGESGKLES 867 Query: 59 LEVIIEKANA--APIIVAYHFNSDLARLQKAFPQ---------GRTLDKDPCTIQ-EWNE 106 L ++E+ +++ F L ++ + G T K+ + +N+ Sbjct: 868 LRELLEQIQDGNRRVLIFSQFRGMLDIIESELDKMGMESFKITGSTPAKERQDMTTAFND 927 Query: 107 GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVF 166 G+ + G GLNL G + ++ LWW+ Q I R + G +R V Sbjct: 928 GQRSAFLISLKAGGVGLNLT-GADTVILVDLWWNPAVEAQAIGR-----AHRIGQERNVE 981 Query: 167 VYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 VY +I + TI+E + + +K + +L+ + + Sbjct: 982 VYRMITRGTIEEKIQELQESKRNLVSTILDGAEAK 1016 >gi|327470402|gb|EGF15858.1| Snf2 family protein [Streptococcus sanguinis SK330] Length = 1033 Score = 131 bits (331), Expect = 4e-29, Method: Composition-based stats. Identities = 38/215 (17%), Positives = 84/215 (39%), Gaps = 24/215 (11%) Query: 1 MKQYHKFQRELYCDLQGENIE--AFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKA 58 + + ++ + I S ++ Q+ + + E+ E K+++ Sbjct: 812 LALLKQM-QDRIIHATEDEINRSKIEILSGLMRLRQICDTPKLFMED---YEGESGKLES 867 Query: 59 LEVIIEKANA--APIIVAYHFNSDLARLQKAFPQ---------GRTLDKDPCTIQ-EWNE 106 L ++E+ +++ F L ++ + G T K+ + +N+ Sbjct: 868 LRELLEQIQDGNRRVLIFSQFRGMLDIIESELDKMGMESFKITGSTPAKERQDMTTAFND 927 Query: 107 GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVF 166 G+ + G GLNL G + ++ LWW+ Q I R + G +R V Sbjct: 928 GQRSAFLISLKAGGVGLNLT-GADTVILVDLWWNPAVEAQAIGR-----AHRIGQERNVE 981 Query: 167 VYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 VY +I + TI+E + + +K + +L+ + + Sbjct: 982 VYRMITRGTIEEKIQELQESKRNLVSTILDGAEAK 1016 >gi|324993643|gb|EGC25562.1| Snf2 family protein [Streptococcus sanguinis SK405] gi|324995045|gb|EGC26958.1| Snf2 family protein [Streptococcus sanguinis SK678] gi|327462912|gb|EGF09233.1| Snf2 family protein [Streptococcus sanguinis SK1] Length = 1033 Score = 131 bits (331), Expect = 4e-29, Method: Composition-based stats. Identities = 38/215 (17%), Positives = 84/215 (39%), Gaps = 24/215 (11%) Query: 1 MKQYHKFQRELYCDLQGENIE--AFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKA 58 + + ++ + I S ++ Q+ + + E+ E K+++ Sbjct: 812 LALLKQM-QDRIIHATEDEINRSKIEILSGLMRLRQICDTPKLFMED---YEGESGKLES 867 Query: 59 LEVIIEKANA--APIIVAYHFNSDLARLQKAFPQ---------GRTLDKDPCTIQ-EWNE 106 L ++E+ +++ F L ++ + G T K+ + +N+ Sbjct: 868 LRELLEQIQDGNRRVLIFSQFRGMLDIIESELDKMGMESFKITGSTPAKERQDMTTAFND 927 Query: 107 GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVF 166 G+ + G GLNL G + ++ LWW+ Q I R + G +R V Sbjct: 928 GQRSAFLISLKAGGVGLNLT-GADTVILVDLWWNPAVEAQAIGR-----AHRIGQERNVE 981 Query: 167 VYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 VY +I + TI+E + + +K + +L+ + + Sbjct: 982 VYRMITRGTIEEKIQELQESKRNLVSTILDGAEAK 1016 >gi|125718601|ref|YP_001035734.1| Snf2 family protein, putative [Streptococcus sanguinis SK36] gi|125498518|gb|ABN45184.1| Snf2 family protein, putative [Streptococcus sanguinis SK36] Length = 1033 Score = 131 bits (331), Expect = 4e-29, Method: Composition-based stats. Identities = 38/215 (17%), Positives = 84/215 (39%), Gaps = 24/215 (11%) Query: 1 MKQYHKFQRELYCDLQGENIE--AFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKA 58 + + ++ + I S ++ Q+ + + E+ E K+++ Sbjct: 812 LALLKQM-QDRIIHATEDEINRSKIEILSGLMRLRQICDTPKLFMED---YEGESGKLES 867 Query: 59 LEVIIEKANA--APIIVAYHFNSDLARLQKAFPQ---------GRTLDKDPCTIQ-EWNE 106 L ++E+ +++ F L ++ + G T K+ + +N+ Sbjct: 868 LRELLEQIQDGNRRVLIFSQFRGMLDIIESELDKMSMESFKITGSTPAKERQDMTTAFND 927 Query: 107 GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVF 166 G+ + G GLNL G + ++ LWW+ Q I R + G +R V Sbjct: 928 GQRSAFLISLKAGGVGLNLT-GADTVILVDLWWNPAVEAQAIGR-----AHRIGQERNVE 981 Query: 167 VYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 VY +I + TI+E + + +K + +L+ + + Sbjct: 982 VYRMITRGTIEEKIQELQESKRNLVSTILDGAEAK 1016 >gi|325696368|gb|EGD38259.1| Snf2 family protein [Streptococcus sanguinis SK160] Length = 1033 Score = 131 bits (331), Expect = 4e-29, Method: Composition-based stats. Identities = 38/215 (17%), Positives = 84/215 (39%), Gaps = 24/215 (11%) Query: 1 MKQYHKFQRELYCDLQGENIE--AFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKA 58 + + ++ + I S ++ Q+ + + E+ E K+++ Sbjct: 812 LALLKQM-QDRIIHATEDEINRSKIEILSGLMRLRQICDTPKLFMED---YEGESGKLES 867 Query: 59 LEVIIEKANA--APIIVAYHFNSDLARLQKAFPQ---------GRTLDKDPCTIQ-EWNE 106 L ++E+ +++ F L ++ + G T K+ + +N+ Sbjct: 868 LRELLEQIQDGNRRVLIFSQFRGMLDIIESELDKLGMESFKITGSTPAKERQDMTTAFND 927 Query: 107 GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVF 166 G+ + G GLNL G + ++ LWW+ Q I R + G +R V Sbjct: 928 GQRSAFLISLKAGGVGLNLT-GADTVILVDLWWNPAVEAQAIGR-----AHRIGQERNVE 981 Query: 167 VYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 VY +I + TI+E + + +K + +L+ + + Sbjct: 982 VYRMITRGTIEEKIQELQESKRNLVSTILDGAEAK 1016 >gi|325690932|gb|EGD32932.1| Snf2 family protein [Streptococcus sanguinis SK115] Length = 1033 Score = 131 bits (331), Expect = 5e-29, Method: Composition-based stats. Identities = 38/215 (17%), Positives = 84/215 (39%), Gaps = 24/215 (11%) Query: 1 MKQYHKFQRELYCDLQGENIE--AFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKA 58 + + ++ + I S ++ Q+ + + E+ E K+++ Sbjct: 812 LALLKQM-QDRIIHATEDEINRSKIEILSGLMRLRQICDTPKLFMED---YEGESGKLES 867 Query: 59 LEVIIEKANA--APIIVAYHFNSDLARLQKAFPQ---------GRTLDKDPCTIQ-EWNE 106 L ++E+ +++ F L ++ + G T K+ + +N+ Sbjct: 868 LRELLEQIQDGNRRVLIFSQFRGMLDIIESELDKLGMESFKITGSTPAKERQDMTTAFND 927 Query: 107 GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVF 166 G+ + G GLNL G + ++ LWW+ Q I R + G +R V Sbjct: 928 GQRSAFLISLKAGGVGLNLT-GADTVILVDLWWNPAVEAQAIGR-----AHRIGQERNVE 981 Query: 167 VYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 VY +I + TI+E + + +K + +L+ + + Sbjct: 982 VYRMITRGTIEEKIQELQESKRNLVSTILDGAEAK 1016 >gi|302561960|ref|ZP_07314302.1| SNF2/helicase domain-containing protein [Streptomyces griseoflavus Tu4000] gi|302479578|gb|EFL42671.1| SNF2/helicase domain-containing protein [Streptomyces griseoflavus Tu4000] Length = 652 Score = 131 bits (330), Expect = 5e-29, Method: Composition-based stats. Identities = 41/210 (19%), Positives = 82/210 (39%), Gaps = 25/210 (11%) Query: 3 QYHKFQRELYCDLQGENIEAFNSASKTVKCL----QLANG-AVYYDEEKHWKEVHDEKIK 57 Y RE ++ G + VK L Q+ N A + EE+ K++ Sbjct: 425 LYEAVVREALAEIAG--ADGVTRRGLIVKLLTGLKQICNHPAQFLKEERPVVAGRSGKLE 482 Query: 58 ALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFP----------QGRTLDKDPCTIQEWN 105 L+ +++ A ++V + L++ G + ++ + Sbjct: 483 LLDELLDTVLTEGAGVLVFTQYVRMARLLERHLAARGVPAQFLHGGTPVAGREAMVRRFQ 542 Query: 106 EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 +G++P+ + G GLNL + +V + WW+ Q +R + G R V Sbjct: 543 DGEVPVFLLSLKAAGTGLNLTRAEH-VVHYDRWWNPAVEAQATDR-----AYRIGQTRPV 596 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 V+ +IA+ T+++ + L K + D +L Sbjct: 597 QVHRIIAEGTVEDRIAALLERKRELADAVL 626 >gi|332074276|gb|EGI84753.1| helicase conserved C-terminal domain protein [Streptococcus pneumoniae GA17545] Length = 1032 Score = 131 bits (330), Expect = 5e-29, Method: Composition-based stats. Identities = 36/208 (17%), Positives = 79/208 (37%), Gaps = 23/208 (11%) Query: 9 RELYCDLQGENI--EAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIE-- 64 R+ + + S ++ Q+ + + E+ + K+ +L ++ Sbjct: 816 RDHLAQVSEQEFQRSRVEILSGLMRLRQICDTPALFMED---YQGASGKLDSLRDLLVQV 872 Query: 65 KANAAPIIVAYHFNSDLARLQKAFPQ---------GRTLDKDPCTI-QEWNEGKIPLLFA 114 +++ F L ++++ P G T K+ + + +N+G+ Sbjct: 873 ADGRHRVLIFSQFKGMLEKIEQELPDLGLTSFKITGSTPAKERQDMTKAFNQGERDAFLI 932 Query: 115 HPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQN 174 + G GLNL G + ++ LWW+ Q I R + G + V VY L+ + Sbjct: 933 SLKAGGVGLNLT-GADTVILVDLWWNPAVEAQAIGR-----AHRMGQEETVEVYRLVTKG 986 Query: 175 TIDELVLQRLRTKSTIQDLLLNALKKET 202 TI+E + + K + +L+ + Sbjct: 987 TIEEKIQELQEQKKHLVSQVLDGTESRG 1014 >gi|270292306|ref|ZP_06198517.1| Snf2 family protein [Streptococcus sp. M143] gi|270278285|gb|EFA24131.1| Snf2 family protein [Streptococcus sp. M143] Length = 1031 Score = 131 bits (330), Expect = 5e-29, Method: Composition-based stats. Identities = 39/209 (18%), Positives = 80/209 (38%), Gaps = 25/209 (11%) Query: 9 RELYCDLQGENI--EAFNSASKTVKCLQLA-NGAVYYDEEKHWKEVHDEKIKALEVII-- 63 RE + + S ++ Q+ A++ D+ + K+ +L ++ Sbjct: 815 RERLAQVTDQEFQRSRVEILSGLMRLRQICDTPALFMDD----YQGASGKLDSLRDLLLQ 870 Query: 64 EKANAAPIIVAYHFNSDLARLQKAFPQ---------GRTLDKDPCTI-QEWNEGKIPLLF 113 +++ F L ++++ P G T D + + +N+G+ Sbjct: 871 VADGGHRVLIFSQFKGMLEKIEQELPDLGLTSFKITGSTPAHDRQEMTKAFNQGERDAFL 930 Query: 114 AHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQ 173 + G GLNL G + ++ LWW+ Q I R + G ++ V VY LI + Sbjct: 931 ISLKAGGVGLNLT-GADTVILVDLWWNPAVEAQAIGR-----AHRMGQEQMVEVYRLITK 984 Query: 174 NTIDELVLQRLRTKSTIQDLLLNALKKET 202 TI+E + + K + +L+ + Sbjct: 985 GTIEEKIQELQEQKKHLVSQVLDGTESRA 1013 >gi|149007570|ref|ZP_01831205.1| Snf2 family protein [Streptococcus pneumoniae SP18-BS74] gi|147760929|gb|EDK67899.1| Snf2 family protein [Streptococcus pneumoniae SP18-BS74] Length = 1032 Score = 131 bits (330), Expect = 5e-29, Method: Composition-based stats. Identities = 36/208 (17%), Positives = 79/208 (37%), Gaps = 23/208 (11%) Query: 9 RELYCDLQGENI--EAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIE-- 64 R+ + + S ++ Q+ + + E+ + K+ +L ++ Sbjct: 816 RDHLAQVSEQEFQRSRVEILSGLMRLRQICDTPALFMED---YQGASGKLDSLRDLLVQV 872 Query: 65 KANAAPIIVAYHFNSDLARLQKAFPQ---------GRTLDKDPCTI-QEWNEGKIPLLFA 114 +++ F L ++++ P G T K+ + + +N+G+ Sbjct: 873 ADGRHRVLIFSQFKGMLEKIEQELPDLGLTSFKITGSTPAKERQDMTKAFNQGERDAFLI 932 Query: 115 HPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQN 174 + G GLNL G + ++ LWW+ Q I R + G + V VY L+ + Sbjct: 933 SLKAGGVGLNLT-GADTVILVDLWWNPAVEAQAIGR-----AHRMGQEETVEVYRLVTKG 986 Query: 175 TIDELVLQRLRTKSTIQDLLLNALKKET 202 TI+E + + K + +L+ + Sbjct: 987 TIEEKIQELQEQKKHLVSQVLDGTESRG 1014 >gi|315655316|ref|ZP_07908216.1| conserved hypothetical protein [Mobiluncus curtisii ATCC 51333] gi|315490256|gb|EFU79881.1| conserved hypothetical protein [Mobiluncus curtisii ATCC 51333] Length = 988 Score = 131 bits (330), Expect = 5e-29, Method: Composition-based stats. Identities = 44/189 (23%), Positives = 76/189 (40%), Gaps = 22/189 (11%) Query: 24 NSASKTVKCLQLANGAVYYDEEKH-WKEVHDEKIKALEVIIEKANAAP-----IIVAYHF 77 N + + QLA A D + H ++ LE + + +N P +V F Sbjct: 787 NILTALTRLRQLALSAKLIDPQAHEDGAKVTYLLQTLEGLRDDSNLNPRQRHQALVFSQF 846 Query: 78 NSDLARLQKAFPQGRT---------LDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYG 128 S LA L++ Q D+D + + G++ + + G GLNL Sbjct: 847 TSFLAILRERLDQAGIDYAYLDGTSRDRDRQ-VARFQNGEVDVFLISLKAGGFGLNLTQ- 904 Query: 129 GNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKS 188 + + WW+ Q ++R + G KR V VY L+A +TI++ VL+ K Sbjct: 905 ADYVFLTDPWWNPAAEAQAVDR-----AHRLGQKRFVNVYRLVATDTIEQRVLELQERKR 959 Query: 189 TIQDLLLNA 197 + +L+ Sbjct: 960 DLIGAVLSG 968 >gi|157150075|ref|YP_001449829.1| Snf2 family protein [Streptococcus gordonii str. Challis substr. CH1] gi|157074869|gb|ABV09552.1| Snf2 family protein [Streptococcus gordonii str. Challis substr. CH1] Length = 1029 Score = 131 bits (330), Expect = 5e-29, Method: Composition-based stats. Identities = 40/194 (20%), Positives = 79/194 (40%), Gaps = 23/194 (11%) Query: 21 EAFNSASKTVKCLQLA-NGAVYYDEEKHWKEVHDEKIKALEVIIEKAN--AAPIIVAYHF 77 + S ++ Q+ A++ DE + K+ +L ++E+ + +++ F Sbjct: 829 DKIEILSGLMRLRQICDTPALFLDE----YQGDSGKLDSLRELLEQIHSSNHRVLIFSQF 884 Query: 78 NSDLARLQKAF---------PQGRTLDKDPCTIQ-EWNEGKIPLLFAHPASCGHGLNLQY 127 L +++ G T KD + +N+G+ + G GLNL Sbjct: 885 RGMLDLIEQELQSLEMESFKITGSTPAKDRQEMTTAFNDGQKDAFLISLKAGGVGLNLT- 943 Query: 128 GGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTK 187 G + ++ LWW+ Q I R + G +R V VY LI + TI+E + + +K Sbjct: 944 GADTVILVDLWWNPAVEAQAIGR-----AHRMGQERNVEVYRLITRGTIEEKIQELQESK 998 Query: 188 STIQDLLLNALKKE 201 + +L+ + Sbjct: 999 KNLISTILDGTESR 1012 >gi|325283092|ref|YP_004255633.1| SNF2-related protein [Deinococcus proteolyticus MRP] gi|324314901|gb|ADY26016.1| SNF2-related protein [Deinococcus proteolyticus MRP] Length = 1322 Score = 131 bits (330), Expect = 5e-29, Method: Composition-based stats. Identities = 37/205 (18%), Positives = 77/205 (37%), Gaps = 24/205 (11%) Query: 6 KFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIK----ALEV 61 + +RE + +G + ++ Q A ++ K + L Sbjct: 972 RVRRE--LEARGLARSSVTILDALLRLRQAATDPRLVRLSAAASVQNNAKREWLRSQLPE 1029 Query: 62 IIEKANAAPIIVAYHFNSDLARLQKAFPQ---------GRTLDKDPCTIQEWNEGKIPLL 112 ++++ ++V F S L L+ + G+T + I+++ G + Sbjct: 1030 LVQE--GHRVLVFSQFASLLGLLEADLKELGISYSKLTGQTR-RRAEAIEQFQSGHADVF 1086 Query: 113 FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIA 172 + G GLNL + ++ WW+ Q +R + G + VFVY LIA Sbjct: 1087 LISLKAGGVGLNLT-AADTVIHLDPWWNPAAEAQATDR-----AYRIGQDQPVFVYKLIA 1140 Query: 173 QNTIDELVLQRLRTKSTIQDLLLNA 197 +++E +L K+ + +L+ Sbjct: 1141 AGSVEERILDLQARKAALASGVLDG 1165 >gi|315613488|ref|ZP_07888396.1| Snf2 family protein [Streptococcus sanguinis ATCC 49296] gi|315314484|gb|EFU62528.1| Snf2 family protein [Streptococcus sanguinis ATCC 49296] Length = 1031 Score = 131 bits (330), Expect = 6e-29, Method: Composition-based stats. Identities = 38/209 (18%), Positives = 80/209 (38%), Gaps = 25/209 (11%) Query: 9 RELYCDLQGENI--EAFNSASKTVKCLQLA-NGAVYYDEEKHWKEVHDEKIKALEVII-- 63 R+ + + S ++ Q+ A++ D+ + K+ +L ++ Sbjct: 815 RDRLAQVTDQEFQRSRVEILSGLMRLRQICDTPALFMDD----FQGASGKLDSLRDLLLQ 870 Query: 64 EKANAAPIIVAYHFNSDLARLQKAFPQ---------GRTLDKDPCTI-QEWNEGKIPLLF 113 +++ F L ++++ P G T D + + +N+G+ Sbjct: 871 VADGGHRVLIFSQFKGMLEKIEQELPDLGLTSFKITGSTPAHDRQEMTKAFNQGERDAFL 930 Query: 114 AHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQ 173 + G GLNL G + ++ LWW+ Q I R + G ++ V VY LI + Sbjct: 931 ISLKAGGVGLNLT-GADTVILVDLWWNPAVEAQAIGR-----AHRMGQEQMVEVYRLITK 984 Query: 174 NTIDELVLQRLRTKSTIQDLLLNALKKET 202 TI+E + + K + +L+ + Sbjct: 985 GTIEEKIQELQEQKKHLVSQVLDGTESRA 1013 >gi|325570841|ref|ZP_08146524.1| Snf2 family protein [Enterococcus casseliflavus ATCC 12755] gi|325156351|gb|EGC68533.1| Snf2 family protein [Enterococcus casseliflavus ATCC 12755] Length = 1054 Score = 131 bits (330), Expect = 6e-29, Method: Composition-based stats. Identities = 39/209 (18%), Positives = 83/209 (39%), Gaps = 23/209 (11%) Query: 3 QYHKFQRELYCDLQGENI--EAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 Y + RE + + + + + Q+ + E+ E K++ ++ Sbjct: 832 AYLRQMREEIAQMDSTSFRKNRISILAGLTRLRQICCDPRLFVED---YEGSSGKLEQVK 888 Query: 61 VIIEKA--NAAPIIVAYHFNSDLARLQKAFPQ---------GRTLDKDP-CTIQEWNEGK 108 ++ A N +++ F S L+ +++ Q G T +D + +N G+ Sbjct: 889 DLLLAAKENGRRVLLFSQFTSMLSIIEEELAQEGFESFYLRGSTPPQDRLTMVNAFNSGE 948 Query: 109 IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVY 168 + + G GLNL G + ++ + LWW+ +Q R + G K V V+ Sbjct: 949 KDVFLISLKAGGTGLNLT-GADTVILYDLWWNPAVEEQAAGR-----AHRIGQKNVVEVW 1002 Query: 169 YLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 +IA+ TI+E + + K + ++ Sbjct: 1003 RMIAEGTIEERMDALQQEKRELFQKVIQG 1031 >gi|119470636|ref|ZP_01613304.1| putative DNA helicase with SNF2 domain [Alteromonadales bacterium TW-7] gi|119446106|gb|EAW27384.1| putative DNA helicase with SNF2 domain [Alteromonadales bacterium TW-7] Length = 1048 Score = 131 bits (330), Expect = 6e-29, Method: Composition-based stats. Identities = 41/198 (20%), Positives = 75/198 (37%), Gaps = 24/198 (12%) Query: 10 ELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEV---IIEKA 66 +L+ + QG +K Q+ + + + K++ L ++ Sbjct: 842 DLFAE-QGVQKSKLAFLEALLKLRQICCHPKLIEPD---TQAGSAKLEWLSTHLPLMLSL 897 Query: 67 NAAPIIVAYHFNSDLARLQK---------AFPQGRTLDKDPCTIQEWNEGKIPLLFAHPA 117 +I+ F S L + K + G+T +D I E+ GK + Sbjct: 898 -GRKVIIFSQFTSALDLIAKQLSELDINFSLLTGQTRHRD-KVIDEFTSGKTSVFLISLK 955 Query: 118 SCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 + G GLNL + ++ F WW+ +Q +R + G VFVY LI ++I+ Sbjct: 956 AGGTGLNLTQ-ADTVIHFDPWWNPAVEKQATDR-----AYRIGQTNPVFVYKLIMSHSIE 1009 Query: 178 ELVLQRLRTKSTIQDLLL 195 + V + K + D L Sbjct: 1010 QKVFKMQEDKQALVDALF 1027 >gi|309774808|ref|ZP_07669829.1| Snf2 family protein [Erysipelotrichaceae bacterium 3_1_53] gi|308917366|gb|EFP63085.1| Snf2 family protein [Erysipelotrichaceae bacterium 3_1_53] Length = 520 Score = 131 bits (330), Expect = 6e-29, Method: Composition-based stats. Identities = 37/184 (20%), Positives = 67/184 (36%), Gaps = 25/184 (13%) Query: 26 ASKTVKCLQLANGA--VYYDEEKHWKEVHDEKIKALEVIIE--KANAAPIIVAYHFNSD- 80 S + QL +Y + KI A IE + + +++ F S Sbjct: 329 LSMLTRLRQLCCDPRLLYENYNGV-----GAKISACMEFIENCRESGKKVLLFSQFTSLL 383 Query: 81 --------LARLQKAFPQGRTLD-KDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNI 131 + +G T + + +N P+ + G GLNL + Sbjct: 384 SLLEKELVRQDIPYYLLKGSTPKLQRQQLVNSFNSDDTPVFLISLKAGGTGLNLT-SAEV 442 Query: 132 LVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQ 191 ++ F WW++ Q +R + G V V LIA++TI+E ++Q K + Sbjct: 443 VIHFDPWWNVSAQNQATDR-----AYRIGQHNNVQVVKLIAKDTIEEKIMQLQSLKQDLS 497 Query: 192 DLLL 195 D ++ Sbjct: 498 DSII 501 >gi|318081201|ref|ZP_07988533.1| helicase [Streptomyces sp. SA3_actF] Length = 770 Score = 131 bits (329), Expect = 6e-29, Method: Composition-based stats. Identities = 40/210 (19%), Positives = 74/210 (35%), Gaps = 23/210 (10%) Query: 3 QYHKFQRELYCDLQGENIEAFNSASK--TVKCLQLANG-AVYYDEEKHWKEVH--DEKIK 57 Y RE ++ + Q+ N A Y E + K+ Sbjct: 541 LYEAVVRESLAAIESAEGMSRRGLVLRLITSLKQICNHPAQYLKEHPDTARLPGRSGKLD 600 Query: 58 ALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFP----------QGRTLDKDPCTIQEWN 105 AL+ ++ A ++V + L G +D + + Sbjct: 601 ALDELLGTILAEDGSVLVFTQYVRMARLLTAHLAAQAVPAGLLHGGTPVDARDQLVDRFQ 660 Query: 106 EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 G +P+L + G GLNL G+ +V + WW+ Q +R + G R V Sbjct: 661 SGALPVLVLSLKAAGTGLNLTRAGH-VVHYDRWWNPAVEDQATDR-----AHRIGQTRHV 714 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 V+ L+A+ T+++ + + K + D +L Sbjct: 715 QVHRLLAEGTVEDRIADLVAGKQALADAVL 744 >gi|311032686|ref|ZP_07710776.1| SWF/SNF family helicase [Bacillus sp. m3-13] Length = 1044 Score = 131 bits (329), Expect = 6e-29, Method: Composition-based stats. Identities = 33/205 (16%), Positives = 77/205 (37%), Gaps = 23/205 (11%) Query: 6 KFQRELYCDLQGENI--EAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVII 63 K + + L + + + + Q+ + + K + L +I Sbjct: 829 KLRHDTLKHLNKDTLRKNKIRILAGLTRLRQICCHPSLFVNG---YKGSSAKFEMLLQLI 885 Query: 64 EKAN--AAPIIVAYHFNSDLARL---------QKAFPQGRTLDKDPCTI-QEWNEGKIPL 111 E++ +++ F L + + G+T ++ + +N G+ Sbjct: 886 EESQRSGRRVLIFSQFTKMLELIGRELAYQGLPYFYLDGQTPSEERVERCERFNSGERDF 945 Query: 112 LFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLI 171 + G GLNL G + ++ + LWW+ +Q +R + G + V V L+ Sbjct: 946 FLISLKAGGTGLNLT-GADTVILYDLWWNPAVEEQAADR-----AHRMGQTQTVQVIKLV 999 Query: 172 AQNTIDELVLQRLRTKSTIQDLLLN 196 A+ TI+E + + K + + +++ Sbjct: 1000 ARGTIEEKMNELQDKKRHLIEEIID 1024 >gi|313898599|ref|ZP_07832134.1| SNF2 family N-terminal domain protein [Clostridium sp. HGF2] gi|312956483|gb|EFR38116.1| SNF2 family N-terminal domain protein [Clostridium sp. HGF2] Length = 1077 Score = 131 bits (329), Expect = 6e-29, Method: Composition-based stats. Identities = 37/184 (20%), Positives = 66/184 (35%), Gaps = 25/184 (13%) Query: 26 ASKTVKCLQLANGA--VYYDEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNS-- 79 S + QL +Y + KI A IE + +++ F S Sbjct: 886 LSMLTRLRQLCCDPRLLYENYNGI-----GAKISACMEFIESCRESGKKVLLFSQFTSLL 940 Query: 80 -------DLARLQKAFPQGRTLD-KDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNI 131 + +G T + + +N P+ + G GLNL + Sbjct: 941 SLLEKELIRQDIPYYLLKGSTPKLQRQQLVNSFNSDDTPIFLISLKAGGTGLNLT-SAEV 999 Query: 132 LVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQ 191 ++ F WW++ Q +R + G V V LIA++TI+E ++Q K + Sbjct: 1000 VIHFDPWWNVSAQNQATDR-----AYRIGQHNNVQVVKLIAKDTIEEKIMQLQSLKQDLS 1054 Query: 192 DLLL 195 D ++ Sbjct: 1055 DSII 1058 >gi|56421797|ref|YP_149115.1| DNA/RNA helicase [Geobacillus kaustophilus HTA426] gi|56381639|dbj|BAD77547.1| DNA/RNA helicase (SNF2 family) [Geobacillus kaustophilus HTA426] Length = 919 Score = 131 bits (329), Expect = 6e-29, Method: Composition-based stats. Identities = 43/218 (19%), Positives = 79/218 (36%), Gaps = 33/218 (15%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANG--------AVYYDEEKHWKEVH- 52 Y + + E + + ++ LQ+ NG A+Y E + + V Sbjct: 687 ALYEQLVNDTL-----ERAKEASPFARRGLILQMLNGVKQICDHPALYLKERRPRQLVER 741 Query: 53 DEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQ-----------GRTLDKDPC 99 K++ L +IE+ AN ++ + +Q+ G Sbjct: 742 SHKLEKLIELIEQIRANDESCLIFTQYVRMGEMIQELLSDLFDERVLFLHGGVPKQTRDR 801 Query: 100 TIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQA 159 + E+ K P+ + G GLNL N ++ F WW+ Q +R + Sbjct: 802 MVDEFQAKKAPIFLLSLKAGGTGLNLT-AANHVIHFDRWWNPAVENQATDR-----AYRI 855 Query: 160 GFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 G + V V+ LI TI+E + + L K + D++ Sbjct: 856 GQTKFVHVHKLITTGTIEEKIDEMLEQKQALADVITEG 893 >gi|298346771|ref|YP_003719458.1| helicase [Mobiluncus curtisii ATCC 43063] gi|298236832|gb|ADI67964.1| helicase [Mobiluncus curtisii ATCC 43063] Length = 988 Score = 131 bits (329), Expect = 6e-29, Method: Composition-based stats. Identities = 44/189 (23%), Positives = 76/189 (40%), Gaps = 22/189 (11%) Query: 24 NSASKTVKCLQLANGAVYYDEEKH-WKEVHDEKIKALEVIIEKANAAP-----IIVAYHF 77 N + + QLA A D + H ++ LE + + +N P +V F Sbjct: 787 NILTALTRLRQLALSAKLIDPQAHEDGAKVTYLLQTLEGLRDDSNLNPRQRHQALVFSQF 846 Query: 78 NSDLARLQKAFPQGRT---------LDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYG 128 S LA L++ Q D+D + + G++ + + G GLNL Sbjct: 847 TSFLAILRERLDQAGIDYAYLDGTSRDRDRQ-VARFQNGEVDVFLISLKAGGFGLNLTQ- 904 Query: 129 GNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKS 188 + + WW+ Q ++R + G KR V VY L+A +TI++ VL+ K Sbjct: 905 ADYVFLTDPWWNPAAEAQAVDR-----AHRLGQKRFVNVYRLVATDTIEQRVLELQEKKR 959 Query: 189 TIQDLLLNA 197 + +L+ Sbjct: 960 DLIGAVLSG 968 >gi|304389525|ref|ZP_07371488.1| conserved hypothetical protein [Mobiluncus curtisii subsp. curtisii ATCC 35241] gi|304327335|gb|EFL94570.1| conserved hypothetical protein [Mobiluncus curtisii subsp. curtisii ATCC 35241] Length = 988 Score = 131 bits (329), Expect = 7e-29, Method: Composition-based stats. Identities = 44/189 (23%), Positives = 76/189 (40%), Gaps = 22/189 (11%) Query: 24 NSASKTVKCLQLANGAVYYDEEKH-WKEVHDEKIKALEVIIEKANAAP-----IIVAYHF 77 N + + QLA A D + H ++ LE + + +N P +V F Sbjct: 787 NILTALTRLRQLALSAKLIDPQAHEDGAKVTYLLQTLEGLRDDSNLNPRQRHQALVFSQF 846 Query: 78 NSDLARLQKAFPQGRT---------LDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYG 128 S LA L++ Q D+D + + G++ + + G GLNL Sbjct: 847 TSFLAILRERLDQAGIDYAYLDGTSRDRDRQ-VARFQNGEVDVFLISLKAGGFGLNLTQ- 904 Query: 129 GNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKS 188 + + WW+ Q ++R + G KR V VY L+A +TI++ VL+ K Sbjct: 905 ADYVFLTDPWWNPAAEAQAVDR-----AHRLGQKRFVNVYRLVATDTIEQRVLELQEKKR 959 Query: 189 TIQDLLLNA 197 + +L+ Sbjct: 960 DLIGAVLSG 968 >gi|315656771|ref|ZP_07909658.1| conserved hypothetical protein [Mobiluncus curtisii subsp. holmesii ATCC 35242] gi|315492726|gb|EFU82330.1| conserved hypothetical protein [Mobiluncus curtisii subsp. holmesii ATCC 35242] Length = 988 Score = 131 bits (329), Expect = 7e-29, Method: Composition-based stats. Identities = 44/189 (23%), Positives = 76/189 (40%), Gaps = 22/189 (11%) Query: 24 NSASKTVKCLQLANGAVYYDEEKH-WKEVHDEKIKALEVIIEKANAAP-----IIVAYHF 77 N + + QLA A D + H ++ LE + + +N P +V F Sbjct: 787 NILTALTRLRQLALSAKLIDPQAHEDGAKVTYLLQTLEGLRDDSNLNPRQRHQALVFSQF 846 Query: 78 NSDLARLQKAFPQGRT---------LDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYG 128 S LA L++ Q D+D + + G++ + + G GLNL Sbjct: 847 TSFLAILRERLDQAGIDYAYLDGTSRDRDRQ-VARFQNGEVDVFLISLKAGGFGLNLTQ- 904 Query: 129 GNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKS 188 + + WW+ Q ++R + G KR V VY L+A +TI++ VL+ K Sbjct: 905 ADYVFLTDPWWNPAAEAQAVDR-----AHRLGQKRFVNVYRLVATDTIEQRVLELQEKKR 959 Query: 189 TIQDLLLNA 197 + +L+ Sbjct: 960 DLIGAVLSG 968 >gi|313676698|ref|YP_004054694.1| snf2-related protein [Marivirga tractuosa DSM 4126] gi|312943396|gb|ADR22586.1| SNF2-related protein [Marivirga tractuosa DSM 4126] Length = 976 Score = 131 bits (329), Expect = 7e-29, Method: Composition-based stats. Identities = 41/213 (19%), Positives = 82/213 (38%), Gaps = 30/213 (14%) Query: 3 QYHKFQ---RELYCD-LQGENIEAFNSASK--TVKCLQLANGAVYYDEEKHWKEVHDEKI 56 +Y + + R++ D ++ + I + + Q+AN D E + K+ Sbjct: 756 KYEEVKNYFRDMILDEIEKKGIRSSQMILLQGLTQLRQIANHPKMVDPE---YQGDSGKM 812 Query: 57 K----ALEVIIEKANAAPIIVAYHF-NS--------DLARLQKAFPQGRTLDKDPCTIQE 103 + L II + +++ F + + ++ A+ G T D+ Sbjct: 813 EDVTHMLTSII--SEGHKVLIFSQFVKHLSLFKEFMERSHIKYAYLDGTTKDRQKQVKLF 870 Query: 104 WNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKR 163 + + + G GLNL + + WW+ QQ ++R + G K+ Sbjct: 871 QENQDLSVFLISLKAGGLGLNLT-AADYVFLLDPWWNPAIEQQAVDR-----AHRIGQKQ 924 Query: 164 AVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 VF Y I +NT++E +L K T+ L++ Sbjct: 925 QVFTYKFITKNTVEEKILALQEKKLTLARDLIS 957 >gi|26988870|ref|NP_744295.1| Snf2/Rad54 family helicase [Pseudomonas putida KT2440] gi|24983677|gb|AAN67759.1|AE016407_3 helicase, SNF2/RAD54 family [Pseudomonas putida KT2440] Length = 666 Score = 131 bits (329), Expect = 7e-29, Method: Composition-based stats. Identities = 27/141 (19%), Positives = 59/141 (41%), Gaps = 14/141 (9%) Query: 68 AAPIIVAYHFNSDLARLQKAFPQGRTL--------DKDPCTIQEWNEGKIPLLFAHPASC 119 +++ F S LA +++ + + +Q++ +G+ + + Sbjct: 509 GRRVLLFSQFTSMLALIEQELEKRKIRYSLLTGDTRDRRTPVQQFQQGESEVFLISLKAG 568 Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 G GLNL + ++ F WW+ Q +R + G + VFV+ LI + T++E Sbjct: 569 GVGLNLT-AADTVIHFDPWWNPASENQATDR-----AYRIGQDKPVFVFKLITRGTVEEK 622 Query: 180 VLQRLRTKSTIQDLLLNALKK 200 + + K+ + LL+ + Sbjct: 623 IQLLQQEKAALAASLLDGGQA 643 >gi|284038229|ref|YP_003388159.1| SNF2-related protein [Spirosoma linguale DSM 74] gi|283817522|gb|ADB39360.1| SNF2-related protein [Spirosoma linguale DSM 74] Length = 1127 Score = 131 bits (329), Expect = 7e-29, Method: Composition-based stats. Identities = 46/205 (22%), Positives = 76/205 (37%), Gaps = 19/205 (9%) Query: 3 QYHKFQRELYCDLQGENI--EAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 Y + R + +I + K Q+ N V ++E + KI L Sbjct: 910 AYEQEFRNYLLSTKEGDIPRAKLHILQGLTKLRQICNAPVLLNDE-EFYGNSSAKIDVLM 968 Query: 61 VIIE-KANAAPIIVAYHFNSDLARLQKAFP---------QGRTLDKDPCTIQEWNEGKIP 110 IE K+ I+V F + L ++K G+T D+ + + + Sbjct: 969 EQIENKSPNHKILVFSQFVTMLDLIKKELEARQIGFEYLTGQTNDRQAIVNRFQTDASVR 1028 Query: 111 LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYL 170 + + G GLNL + + WW+ Q I+R + G K+ V L Sbjct: 1029 VFLISLKAGGTGLNLTQ-ADYVYLVDPWWNPAVENQAIDR-----SYRIGQKKNVVAVRL 1082 Query: 171 IAQNTIDELVLQRLRTKSTIQDLLL 195 I NTI+E +L TK + D L+ Sbjct: 1083 ICPNTIEEKILLLQETKQELADKLV 1107 >gi|110639993|ref|YP_680203.1| SNF2 family DNA/RNA helicase [Cytophaga hutchinsonii ATCC 33406] gi|110282674|gb|ABG60860.1| superfamily II DNA/RNA helicase, SNF2 family [Cytophaga hutchinsonii ATCC 33406] Length = 977 Score = 131 bits (329), Expect = 7e-29, Method: Composition-based stats. Identities = 46/213 (21%), Positives = 85/213 (39%), Gaps = 26/213 (12%) Query: 2 KQYHKFQ---RELYCDLQGENIEAFNSASKT---VKCLQLANGAVYYDEEKHWKEVHDEK 55 ++Y K + R L + E A + K Q+AN ++ E K Sbjct: 756 QEYEKTKSNYRNLILESIDEKGLAGSQILLLQGLTKLRQIANHPSLVEDT---FEGTSGK 812 Query: 56 IKALEVIIEKAN--AAPIIVAYHF-NS--------DLARLQKAFPQGRTLDKDPCTIQEW 104 ++ + +++ A I+V F D A ++ A+ G+T D+ + Sbjct: 813 MEDVNYMLDNALELGHKILVFSQFVKHLHLYAKLLDKAGIKYAYLDGQTRDRQAEVERFQ 872 Query: 105 NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA 164 NE I + + G GLNL + + WW+ Q ++R + G K Sbjct: 873 NEEGIRVFLISLKAGGLGLNLT-AADYVFLLDPWWNPAVEAQAVDR-----AYRIGQKNT 926 Query: 165 VFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 VF Y I +NT++E +L + K + + L+++ Sbjct: 927 VFTYKFITKNTVEEKILNLQKNKLKLANDLISS 959 >gi|239828513|ref|YP_002951137.1| non-specific serine/threonine protein kinase [Geobacillus sp. WCH70] gi|239808806|gb|ACS25871.1| Non-specific serine/threonine protein kinase [Geobacillus sp. WCH70] Length = 925 Score = 131 bits (329), Expect = 7e-29, Method: Composition-based stats. Identities = 48/229 (20%), Positives = 86/229 (37%), Gaps = 42/229 (18%) Query: 5 HKFQRELYCDLQGENIE------------AFNSA--SKTVKCLQLANG--------AVYY 42 K +++ YC L E A N++ ++ LQ+ NG A+Y Sbjct: 677 DKLEQKEYCPLTAEQAALYEQLVNDTLERAKNASPFARRGLILQMLNGVKQICDHPALYL 736 Query: 43 DEEKHWKEVH-DEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQ--------- 90 E + + V K++ L +IE+ AN ++ + +Q+ Sbjct: 737 KERRPRQLVERSHKLEKLVELIEQIRANDESCLIFTQYVRMGEMIQQLLSDLFDERVLFL 796 Query: 91 --GRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMI 148 G ++E+ K P+ + G GLNL N ++ F WW+ Q Sbjct: 797 HGGVPKQTRDRMVEEFQARKAPIFLLSLKAGGTGLNLT-AANHVIHFDRWWNPAVENQAT 855 Query: 149 ERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 +R + G + V V+ LI TI+E + + L K + D++ Sbjct: 856 DR-----AYRIGQTKFVHVHKLITVGTIEEKIDEMLEQKQALADIITEG 899 >gi|308535304|ref|YP_002139277.2| helicase [Geobacter bemidjiensis Bem] gi|308052649|gb|ACH39481.2| helicase, putative [Geobacter bemidjiensis Bem] Length = 1386 Score = 131 bits (329), Expect = 7e-29, Method: Composition-based stats. Identities = 35/212 (16%), Positives = 74/212 (34%), Gaps = 27/212 (12%) Query: 3 QYHKFQRELYCDLQG-ENIEAFNSA-----SKTVKCLQLANGAVYYDEEKHWKEVHDEKI 56 Y ++ +L G +E ++ ++ + + + K+ Sbjct: 1165 LYEAIRKSALDNLAGVGKVEGKGELHLKILAEIMRLRRACCNPRLVLPDTP---IPSTKL 1221 Query: 57 KALEVIIEKA--NAAPIIVAYHFNSDLARLQKAFPQ----------GRTLDKDPCTIQEW 104 A I+E+ N +V F L +++ + + + + Sbjct: 1222 AAFGEIVEELRENRHKALVFSQFVGHLELIRQYVEKNGIPYQYLDGSTPPQERKKRVDAF 1281 Query: 105 NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA 164 G L + G GLNL + ++ WW+ Q +R + G +R Sbjct: 1282 QSGSGDLFLISLKAGGVGLNLT-AADYVIHMDPWWNPAVEDQASDR-----AHRIGQQRP 1335 Query: 165 VFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 V +Y L+ + TI+E ++ + K + D LL+ Sbjct: 1336 VTIYRLVTRGTIEEKIVGLHQQKRGLADSLLD 1367 >gi|325126030|gb|ADY85360.1| SNF2-related domain:Helicase, C-terminal:SWIM Zn-finger [Lactobacillus delbrueckii subsp. bulgaricus 2038] Length = 637 Score = 131 bits (329), Expect = 7e-29, Method: Composition-based stats. Identities = 43/203 (21%), Positives = 82/203 (40%), Gaps = 27/203 (13%) Query: 11 LYCDLQGENIEAFNSASKTVKCLQLAN--GAVYYDEEKHWKEVHDEKIKALEVIIEKA-- 66 + D +G E + + ++ G +Y D + EK A +I+ A Sbjct: 428 MAEDDEGIKREQIEILAALTRIREICCDPGLLYEDYKGE-----SEKRLACVDLIKSAID 482 Query: 67 NAAPIIVAYHFNSDLARLQKAFP---------QGRTLD-KDPCTIQEWNEGKIP--LLFA 114 +++ F S L L+++ G+T + + +N P + Sbjct: 483 EGHKVLLFSQFTSMLDLLEESLKAEEIGFLRIDGQTPKARRLTLVNVFNHKDSPAKVFLI 542 Query: 115 HPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQN 174 + G GLNL G + ++ + WW++ Q +R + G ++ V VY LIA++ Sbjct: 543 SLKAGGTGLNLT-GADTVIHYDPWWNVAAQNQATDR-----AHRIGQEKKVTVYKLIAKD 596 Query: 175 TIDELVLQRLRTKSTIQDLLLNA 197 T++E +L KS + +L A Sbjct: 597 TVEEAILDLQEAKSLLAQGILTA 619 >gi|227540131|ref|ZP_03970180.1| SNF2 family superfamily II DNA/RNA helicase [Sphingobacterium spiritivorum ATCC 33300] gi|227239992|gb|EEI90007.1| SNF2 family superfamily II DNA/RNA helicase [Sphingobacterium spiritivorum ATCC 33300] Length = 1119 Score = 131 bits (329), Expect = 7e-29, Method: Composition-based stats. Identities = 46/205 (22%), Positives = 78/205 (38%), Gaps = 18/205 (8%) Query: 3 QYHKFQRELYCDLQGENIEAFNSASK--TVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 Y K RE +G+ I K Q+ N E E + KI+ L Sbjct: 900 LYEKEFREFISATEGDEIRKSPMYVLKGLTKLRQICNSTKLLKTEDLSTEDNSAKIETLI 959 Query: 61 VIIEKANA-APIIVAYHFNSDLARLQKA---------FPQGRTLDKDPCTIQEWNEGKIP 110 IE A IIV F S L +QKA G+T +++ + Sbjct: 960 EQIEDNIAYHKIIVFSQFVSMLYLIQKALSAKGINAYMLTGKTKNREQVVHNFQQQEDNR 1019 Query: 111 LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYL 170 + + G GLNL +++ WW+ Q I+R + G ++ V L Sbjct: 1020 VFLISLKAGGTGLNLT-AASLVYLVDPWWNPAVENQAIDR-----AYRIGQQQTVTAVRL 1073 Query: 171 IAQNTIDELVLQRLRTKSTIQDLLL 195 I +T++E +++ ++K+ + L+ Sbjct: 1074 ITPDTVEEKMIKMQQSKNELASALI 1098 >gi|297195014|ref|ZP_06912412.1| helicase [Streptomyces pristinaespiralis ATCC 25486] gi|297152588|gb|EDY65843.2| helicase [Streptomyces pristinaespiralis ATCC 25486] Length = 969 Score = 131 bits (329), Expect = 7e-29, Method: Composition-based stats. Identities = 31/161 (19%), Positives = 69/161 (42%), Gaps = 20/161 (12%) Query: 53 DEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGR-----------TLDKDPC 99 K+ L+ ++E + ++V + S ARL A R + + Sbjct: 796 SGKLALLDELLETILSEDGSVLVFTQYVSM-ARLLSAHLTSRAIPSQLLHGGTPITERER 854 Query: 100 TIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQA 159 + + G++P+ + G GLNL G+ ++ + WW+ +Q +R + Sbjct: 855 MVDRFQSGEVPVFILSLKAAGTGLNLTRAGH-VIHYDRWWNPAVEEQATDR-----AYRI 908 Query: 160 GFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKK 200 G + V V+ L+ + T+++ + + L +K + D +L + + Sbjct: 909 GQTQPVQVHRLVTEGTVEDRIAEMLASKRALADAVLGSGEA 949 >gi|251795916|ref|YP_003010647.1| SNF2-related protein [Paenibacillus sp. JDR-2] gi|247543542|gb|ACT00561.1| SNF2-related protein [Paenibacillus sp. JDR-2] Length = 1088 Score = 131 bits (329), Expect = 8e-29, Method: Composition-based stats. Identities = 40/213 (18%), Positives = 79/213 (37%), Gaps = 28/213 (13%) Query: 2 KQY----HKFQRELYCDLQGENIEAFN---SASKTVKCLQLANGAVYYDEEKHWKEVHDE 54 K Y K + E L + N + + Q+ + + E Sbjct: 857 KLYVSYLAKLRTETVKHLDNDRSLQQNRIKILAGLTRLRQICCHPALFITD---YEGSSA 913 Query: 55 KIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKA---------FPQGRTLDKDPCTI-Q 102 K + L I+E+ + +++ F L+ + K + G T + + Sbjct: 914 KFEQLFEIVEECRSTGKRMLIFSQFTEMLSLISKELVRQGISYFYLDGSTKASERVELCN 973 Query: 103 EWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFK 162 +N+G+ + A + G GLNL G + ++ + LWW+ QQ +R + G Sbjct: 974 RFNDGEKDIFLASLKAGGTGLNLT-GADTVILYDLWWNPAVEQQAADR-----AHRIGQT 1027 Query: 163 RAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 + V V L A T+++ + K + D ++ Sbjct: 1028 KVVQVIRLAAHGTVEDKMYALQERKKNMIDDII 1060 >gi|328887305|emb|CCA60544.1| Helicase, SNF2 or RAD54 family [Streptomyces venezuelae ATCC 10712] Length = 1036 Score = 131 bits (329), Expect = 8e-29, Method: Composition-based stats. Identities = 46/209 (22%), Positives = 78/209 (37%), Gaps = 23/209 (11%) Query: 3 QYHKFQRELYCDLQGENIEAFNSAS--KTVKCLQLANG-AVYYDEEKHWKEVHDEKIKAL 59 Y RE + A Q+ N A Y EE+ E K++ L Sbjct: 806 LYEAVVRETLAAIADAEGMARRGLVVKLLTGLKQICNHPAQYLKEERPRIEGRSGKLELL 865 Query: 60 EVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGR-----------TLDKDPCTIQEWNE 106 + +++ A A +V + ARL K R + + + + Sbjct: 866 DELLDTILAEGACTLVFTQYVGM-ARLLKTHLAARGVRTQFLHGGTPVAEREAMVARFQS 924 Query: 107 GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVF 166 G++P+ + G GLNL + +V + WW+ Q +R + G R V Sbjct: 925 GEVPVFLLSLKAAGTGLNLTRAEH-VVHYDRWWNPAVEAQATDR-----AYRIGQDRPVQ 978 Query: 167 VYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 V+ LIA+ TI++ + L K + D +L Sbjct: 979 VHRLIAEGTIEDRIATMLDRKRELADTVL 1007 >gi|262282141|ref|ZP_06059910.1| Snf2 family protein [Streptococcus sp. 2_1_36FAA] gi|262262595|gb|EEY81292.1| Snf2 family protein [Streptococcus sp. 2_1_36FAA] Length = 1032 Score = 130 bits (328), Expect = 8e-29, Method: Composition-based stats. Identities = 41/210 (19%), Positives = 85/210 (40%), Gaps = 26/210 (12%) Query: 5 HKFQRELYCDLQGENIEAFNSASKTVKCLQLA-NGAVYYDEEKHWKEVHDEKIKALEVII 63 + + +L + IE + ++ Q+ A++ DE + K+ +L ++ Sbjct: 819 ERMRSATDEELNRDKIEILSG---LMRLRQICDTPALFLDE----YQGDSGKLDSLRELL 871 Query: 64 EKAN--AAPIIVAYHFNSDLARLQKAF---------PQGRTLDKDPCTIQ-EWNEGKIPL 111 E+ + +++ F L +++ G T KD + +N+G+ Sbjct: 872 EQIHSSNHRVLIFSQFRGMLDLIEQELQSLEMESFKITGSTPAKDRQEMTTAFNDGQKDA 931 Query: 112 LFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLI 171 + G GLN+ G + ++ LWW+ Q I R + G +R V VY LI Sbjct: 932 FLISLKAGGVGLNVT-GADTVILVDLWWNPAVEAQAIGR-----AHRMGQERNVEVYRLI 985 Query: 172 AQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 + TI+E + + +K + +L+ + Sbjct: 986 TRGTIEEKIQELQESKKNLISTILDGTESR 1015 >gi|163797448|ref|ZP_02191399.1| SWI/SNF family helicase [alpha proteobacterium BAL199] gi|159177197|gb|EDP61756.1| SWI/SNF family helicase [alpha proteobacterium BAL199] Length = 421 Score = 130 bits (328), Expect = 8e-29, Method: Composition-based stats. Identities = 38/210 (18%), Positives = 75/210 (35%), Gaps = 25/210 (11%) Query: 4 YHKFQRELYCDLQGENIEA----FNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKAL 59 Y +R+ L + A ++ + + D++ V K+ A Sbjct: 203 YEALRRQSLDRLAAVDAPAGQRKIQILAEITRLRRACCNPALIDQDA---GVPSGKLAAF 259 Query: 60 EVIIEKA--NAAPIIVAYHFNSDLARLQKAFPQGRTLDK----------DPCTIQEWNEG 107 +++ N +V F + LA ++ A + + + G Sbjct: 260 LDLVDDLVRNRHRALVFSQFVAHLALVRAALDARGIRYEYLDGSTPAADRERRVAAFQAG 319 Query: 108 KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFV 167 + + G GLNL + +V WW+ Q +R+ + G +R V + Sbjct: 320 TADVFLISLRAGGTGLNLT-AADYVVHLDPWWNPAVEDQASDRV-----HRIGQERPVTI 373 Query: 168 YYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 Y LI Q++I+E +L+ R K + +L Sbjct: 374 YRLIMQDSIEEQILRLHRDKRDLAADILEG 403 >gi|228990815|ref|ZP_04150780.1| Helicase, SWF/SNF [Bacillus pseudomycoides DSM 12442] gi|228769341|gb|EEM17939.1| Helicase, SWF/SNF [Bacillus pseudomycoides DSM 12442] Length = 1071 Score = 130 bits (328), Expect = 9e-29, Method: Composition-based stats. Identities = 43/214 (20%), Positives = 82/214 (38%), Gaps = 29/214 (13%) Query: 2 KQYH----KFQRELYCDLQGENI--EAFNSASKTVKCLQLANGA-VYYDEEKHWKEVHDE 54 K Y K + E L + + + + Q+ ++ D+ + Sbjct: 848 KLYAAYLAKLREETLKHLNKDTLRKNKIRILAGLTRLRQICCHPGLFVDDYR----GSSA 903 Query: 55 KIKALEVIIEK--ANAAPIIVAYHFNSDLARL-----QKAFPQGRTLDKDPCTIQ----- 102 K + L I+E+ + I++ F L+ + ++A P P + Sbjct: 904 KFEQLLEIVEECRSTGKRILIFSQFTKMLSIIGRELNRQAVPYFYLDGNTPACERIELCN 963 Query: 103 EWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFK 162 +NEG+ L + G GLNL G + ++ + LWW+ QQ +R + G K Sbjct: 964 RFNEGEGDLFLISLRAGGTGLNLT-GADTVILYDLWWNPAVEQQAADR-----AYRMGQK 1017 Query: 163 RAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 V V L+A TI+E + + +K + ++ Sbjct: 1018 NTVQVIKLVAHGTIEEKMNELQESKKNLIAEVIE 1051 >gi|325105763|ref|YP_004275417.1| SNF2-related protein [Pedobacter saltans DSM 12145] gi|324974611|gb|ADY53595.1| SNF2-related protein [Pedobacter saltans DSM 12145] Length = 964 Score = 130 bits (328), Expect = 9e-29, Method: Composition-based stats. Identities = 42/206 (20%), Positives = 77/206 (37%), Gaps = 20/206 (9%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASK--TVKCLQLANGAVYYD-EEKHWKEVHDEKIKA 58 K +++ EL ++ K Q+AN V + E + + I Sbjct: 747 KTKSEYRNELLKSIENGEFSKSPVQMLQGLTKLRQIANHPVLINHEYEGESSKFTDVIYK 806 Query: 59 LEVIIEKANAAPIIVAYHFN---------SDLARLQKAFPQGRTLDKDPCTIQEWNEGKI 109 L+ +IE ++V F D + ++ G T + + N+ I Sbjct: 807 LQSVIEA--GHKVLVFSQFVKQLDLYRNYFDKNHIAYSYLDGSTQQRGKVVEEFKNDKNI 864 Query: 110 PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYY 169 + + G GLNL + + WW+ QQ I+R + G + VF+Y Sbjct: 865 QVFLISIKAGGVGLNLTEADYVFIL-DPWWNPAIEQQAIDR-----SHRIGQTKNVFIYK 918 Query: 170 LIAQNTIDELVLQRLRTKSTIQDLLL 195 I ++T++E +L K T+ L+ Sbjct: 919 FITKDTVEEKILALQNRKLTVAKSLI 944 >gi|257094070|ref|YP_003167711.1| Non-specific serine/threonine protein kinase [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] gi|257046594|gb|ACV35782.1| Non-specific serine/threonine protein kinase [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] Length = 1400 Score = 130 bits (328), Expect = 9e-29, Method: Composition-based stats. Identities = 39/207 (18%), Positives = 71/207 (34%), Gaps = 27/207 (13%) Query: 7 FQRELYCDLQGENIEAFNSASKTVKCLQL------ANGAVYYDEEKHWKEVHDEKIKALE 60 +RE D+ A + ++ QL A + E + K++A Sbjct: 1182 LRREAASDIDATLDAAPEAQARFNILAQLTRLRRAACDPRLCNPE---FGITGAKVQAFA 1238 Query: 61 VIIEK--ANAAPIIVAYHFNSDLARLQ----------KAFPQGRTLDKDPCTIQEWNEGK 108 + + AN +V F L L+ + + + + G+ Sbjct: 1239 ELASELIANGHKALVFSQFVDFLQVLREPLDESGVHYQYLDGATPAAERSRRVAAFQAGE 1298 Query: 109 IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVY 168 L + G GLNL + +V WW+ Q + R + G R V VY Sbjct: 1299 GDLFLISLKAGGFGLNLT-AADYVVITDPWWNPAAEDQAMGR-----AHRIGQLRPVTVY 1352 Query: 169 YLIAQNTIDELVLQRLRTKSTIQDLLL 195 L+ + T++E ++ K + D +L Sbjct: 1353 RLVTRGTVEERIVDLHHEKRALADSIL 1379 >gi|297621810|ref|YP_003709947.1| SWI/SNF helicase 2 family protein [Waddlia chondrophila WSU 86-1044] gi|297377111|gb|ADI38941.1| SWI/SNF helicase 2 family protein [Waddlia chondrophila WSU 86-1044] Length = 1156 Score = 130 bits (328), Expect = 9e-29, Method: Composition-based stats. Identities = 38/207 (18%), Positives = 80/207 (38%), Gaps = 21/207 (10%) Query: 4 YHKFQRELYCDL---QGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 Y K RE L +G + + + + Q+ + +EK ++ K L Sbjct: 937 YAKSAREELSQLVKKEGFDKVQIHVLATLTRLKQICCHPAIFAKEK-AEDGDSSKYDMLV 995 Query: 61 VIIEKA--NAAPIIVAYHFNSDLARLQK---------AFPQGRTLDKDPCTIQEWNEGKI 109 +++ ++ + L ++K + G T ++ + + I Sbjct: 996 ELLQTLIEGGHKTVIFSQYTKMLQIMRKDLQTLGIRFEYLDGATKNRMNIVKKFNEDHNI 1055 Query: 110 PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYY 169 P+ + G GLNL G + ++ + +WW+ Q +R+ + G R+V Y Sbjct: 1056 PVFLVSLKAGGSGLNL-VGADTVIHYDMWWNPAVENQATDRV-----HRIGQTRSVSSYK 1109 Query: 170 LIAQNTIDELVLQRLRTKSTIQDLLLN 196 L+ TI+E +L+ K + ++N Sbjct: 1110 LVTMGTIEEKILELQERKKGLVKKVIN 1136 >gi|255037622|ref|YP_003088243.1| Non-specific serine/threonine protein kinase [Dyadobacter fermentans DSM 18053] gi|254950378|gb|ACT95078.1| Non-specific serine/threonine protein kinase [Dyadobacter fermentans DSM 18053] Length = 1261 Score = 130 bits (328), Expect = 9e-29, Method: Composition-based stats. Identities = 42/212 (19%), Positives = 81/212 (38%), Gaps = 23/212 (10%) Query: 2 KQYHKFQ----RELYCDLQGENIEAFNSASK--TVKCLQLANGAVYYDEEKHWKEVHDEK 55 K Y F+ +E+ L E + + +K Q+ + K Sbjct: 1039 KVYDTFRERYRQEIAEKLATEGLNKSSFLILEALLKLRQICDSPSIL-SGDEDFGNESAK 1097 Query: 56 IKALE-VIIEKANAAPIIVAYHFNSDLARLQKAFPQ---------GRTLDKDPCTIQEWN 105 ++ + I E A+ I++ F L ++K + G+T+D+ + N Sbjct: 1098 LEEITREIEENASNHKILIFSQFLGMLDLIRKHLEKMNIPYEYLDGQTVDRAGRVNRFQN 1157 Query: 106 EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 + + + G GLNL + + WW+ +ER + R + G R V Sbjct: 1158 DDTCRVFLMSLKAGGVGLNLTE-ADYVYLVDPWWN-----PAVERQAIDRTHRIGQTRKV 1211 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 F Y +I ++TI+E +L + K + + L+ Sbjct: 1212 FAYKMICKDTIEEKILLLQQRKQDLAEDLVGG 1243 >gi|240170156|ref|ZP_04748815.1| SNF2-related protein [Mycobacterium kansasii ATCC 12478] Length = 1077 Score = 130 bits (328), Expect = 1e-28, Method: Composition-based stats. Identities = 43/203 (21%), Positives = 74/203 (36%), Gaps = 21/203 (10%) Query: 6 KFQRELYCDLQGE-NIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIE 64 + +R+ L + F Q+A D KI L + Sbjct: 865 QRERQKVLGLLDDIQRNRFTILKSLTVLRQMALHPGLVDAAHDALVC--AKIDVLVEQLR 922 Query: 65 --KANAAPIIVAYHFNSDLARLQ---------KAFPQGRTLDKDPCTIQEWNEGKIPLLF 113 +V F L R++ + GRT ++ P IQ++ EG P+ Sbjct: 923 DVADGGHRALVFSQFTRFLGRVRDRLGAEGIDYCYLDGRTRNR-PKVIQQFKEGTAPVFL 981 Query: 114 AHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQ 173 + G GLNL + WW+ Q ++R + G +R V VY LIA+ Sbjct: 982 ISLKAGGFGLNLTE-ADYCFLLDPWWNPATETQAVDR-----THRIGQQRNVMVYRLIAR 1035 Query: 174 NTIDELVLQRLRTKSTIQDLLLN 196 +TI+ V+ K+ + +++ Sbjct: 1036 DTIEAKVMALNARKAKLFASVID 1058 >gi|293397496|ref|ZP_06641747.1| SNF2 family DNA helicase [Serratia odorifera DSM 4582] gi|291419984|gb|EFE93262.1| SNF2 family DNA helicase [Serratia odorifera DSM 4582] Length = 1224 Score = 130 bits (328), Expect = 1e-28, Method: Composition-based stats. Identities = 37/208 (17%), Positives = 74/208 (35%), Gaps = 23/208 (11%) Query: 4 YHKFQRELY--CDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEV 61 Y +++ D G +I+ ++ + + + + K+ A Sbjct: 1005 YEALRQQAVERLDSGGGDIKPLQVLTEITRLRRFCCHPSLVLDN---LPLAGSKLAACLD 1061 Query: 62 IIEKA--NAAPIIVAYHFNSDLARLQKAFPQGRTLD----------KDPCTIQEWNEGKI 109 II++ N +V F L L+ A + + + + G+ Sbjct: 1062 IIDELRENHHKALVFSQFVDHLTLLRTALDERGIRYQYLDGSTSPTEREKRVAAFQSGEG 1121 Query: 110 PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYY 169 L + G GLNL + ++ WW+ Q +R + G +R V VY Sbjct: 1122 ELFLISLKAGGTGLNLT-AADYVIHLDPWWNPAVEDQASDR-----AYRIGQERPVTVYR 1175 Query: 170 LIAQNTIDELVLQRLRTKSTIQDLLLNA 197 L+ ++TI+E ++ K + + LL Sbjct: 1176 LVMEDTIEEQMVALHGRKRQLAEDLLAG 1203 >gi|119964500|ref|YP_949262.1| helicase/SNF2 family domain-containing protein [Arthrobacter aurescens TC1] gi|119951359|gb|ABM10270.1| putative helicase/SNF2 family domain protein [Arthrobacter aurescens TC1] Length = 1151 Score = 130 bits (328), Expect = 1e-28, Method: Composition-based stats. Identities = 43/211 (20%), Positives = 76/211 (36%), Gaps = 24/211 (11%) Query: 2 KQYH---KFQRELYCDLQGE-NIEAFNSASKTVKCLQLANGAVYYDEE--KHWKEVHDEK 55 K Y + +R+ L + N F QL+ A D D Sbjct: 931 KVYQTHLQRERQKILGLIDDVNKNRFTIFQSLTLLRQLSLDASLVDSSLSGVRSSKLDVL 990 Query: 56 IKALEVIIEKANAAPIIVAYHFNSDL---------ARLQKAFPQGRTLDKDPCTIQEWNE 106 + LE +I + ++ F L ++ + G T ++ + E+ Sbjct: 991 FEQLEDLI--SEGHRALIFSQFTGFLGKVRERLDAEGVEYCYLDGSTRNR-GDVVSEFKN 1047 Query: 107 GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVF 166 G P+ + G GLNL + + WW+ Q ++R + G R V Sbjct: 1048 GAAPVFLISLKAGGFGLNLTE-ADYVFLLDPWWNPASEAQAVDR-----THRIGQARNVM 1101 Query: 167 VYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 VY L+A++TI+E V+ KS + ++ Sbjct: 1102 VYRLVAKDTIEEKVMALKAKKSQLFADVMEG 1132 >gi|167757228|ref|ZP_02429355.1| hypothetical protein CLORAM_02778 [Clostridium ramosum DSM 1402] gi|167703403|gb|EDS17982.1| hypothetical protein CLORAM_02778 [Clostridium ramosum DSM 1402] Length = 1078 Score = 130 bits (328), Expect = 1e-28, Method: Composition-based stats. Identities = 33/204 (16%), Positives = 74/204 (36%), Gaps = 23/204 (11%) Query: 6 KFQRELYCDLQGENIEAFNSASKTVKCLQLANGA-VYYDEEKHWKEVHDEKIKALEVIIE 64 + +EL L +N++ + + Q+ + YD + K+ +I Sbjct: 865 QVNKELQEQLNYDNVDRIAILAMLTRLRQICCEPRIIYDNISNI----SSKLSGCLDLIR 920 Query: 65 K--ANAAPIIVAYHFNSDLARLQKAFPQGRT----------LDKDPCTIQEWNEGKIPLL 112 N +++ F S L + K + ++ + ++ + Sbjct: 921 NFLGNNQKVLLFSSFTSVLDLIAKELEKESITYYQLTGDTKKEERHRLVNQFQNDDTTVF 980 Query: 113 FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIA 172 + G GLNL ++ F WW++ Q +R + G + V VY L+ Sbjct: 981 LISLKAGGTGLNLT-AAEAVIHFDPWWNMSAQNQATDR-----AYRIGQENVVTVYKLVM 1034 Query: 173 QNTIDELVLQRLRTKSTIQDLLLN 196 +++++E +L+ K + D + Sbjct: 1035 KDSVEEKILELQNKKKNLADSFVE 1058 >gi|237735687|ref|ZP_04566168.1| SWF/SNF family helicase [Mollicutes bacterium D7] gi|229381432|gb|EEO31523.1| SWF/SNF family helicase [Coprobacillus sp. D7] Length = 847 Score = 130 bits (327), Expect = 1e-28, Method: Composition-based stats. Identities = 33/204 (16%), Positives = 74/204 (36%), Gaps = 23/204 (11%) Query: 6 KFQRELYCDLQGENIEAFNSASKTVKCLQLANGA-VYYDEEKHWKEVHDEKIKALEVIIE 64 + +EL L +N++ + + Q+ + YD + K+ +I Sbjct: 634 QVNKELQEQLNYDNVDRIAILAMLTRLRQICCEPRIIYDNISNI----SSKLSGCLDLIR 689 Query: 65 K--ANAAPIIVAYHFNSDLARLQKAFPQGRT----------LDKDPCTIQEWNEGKIPLL 112 N +++ F S L + K + ++ + ++ + Sbjct: 690 NFLGNNQKVLLFSSFTSVLDLIAKELEKESITYYQLTGDTKKEERHRLVNQFQNDDTTVF 749 Query: 113 FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIA 172 + G GLNL ++ F WW++ Q +R + G + V VY L+ Sbjct: 750 LISLKAGGTGLNLT-AAEAVIHFDPWWNMSAQNQATDR-----AYRIGQENVVTVYKLVM 803 Query: 173 QNTIDELVLQRLRTKSTIQDLLLN 196 +++++E +L+ K + D + Sbjct: 804 KDSVEEKILELQNKKKNLADSFVE 827 >gi|296131142|ref|YP_003638392.1| SNF2-related protein [Cellulomonas flavigena DSM 20109] gi|296022957|gb|ADG76193.1| SNF2-related protein [Cellulomonas flavigena DSM 20109] Length = 1096 Score = 130 bits (327), Expect = 1e-28, Method: Composition-based stats. Identities = 46/209 (22%), Positives = 74/209 (35%), Gaps = 23/209 (11%) Query: 2 KQYH---KFQRELYCDLQGE-NIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIK 57 + Y + +R L + + +LA A D ++ + V K+ Sbjct: 874 RAYDTHLQRERSRLLGLLDDFDANRLAIFRSLTTLRRLALDASLVDPDR-YASVPSSKLD 932 Query: 58 ALEVIIE--KANAAPIIVAYHFNSDL---------ARLQKAFPQGRTLDKDPCTIQEWNE 106 AL + A +V F L A L + GRT + + + Sbjct: 933 ALLDQLAPVAAEGHRALVFSQFTGYLRLVADRCRTAGLAYEYLDGRTR-RRGDVVDRFRT 991 Query: 107 GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVF 166 G PL + G GLNL + + WW+ QQ ++R + G R V Sbjct: 992 GSAPLFLVSLRAGGFGLNLTE-ADYVYLLDPWWNPAVEQQAVDR-----THRIGQDRKVM 1045 Query: 167 VYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 V L+A TI+E V+ K + D +L Sbjct: 1046 VNRLVAAGTIEEKVMALAARKRAVFDAVL 1074 >gi|329903743|ref|ZP_08273604.1| DNA helicase, SNF2/RAD54 family [Oxalobacteraceae bacterium IMCC9480] gi|327548223|gb|EGF32923.1| DNA helicase, SNF2/RAD54 family [Oxalobacteraceae bacterium IMCC9480] Length = 824 Score = 130 bits (327), Expect = 1e-28, Method: Composition-based stats. Identities = 33/184 (17%), Positives = 66/184 (35%), Gaps = 18/184 (9%) Query: 24 NSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDL 81 +K Q+ + K++ L ++ A ++V F L Sbjct: 624 TILDALLKLRQVCCDPYLLKGPAMVPAMERAKLELLRDLLPGLVAEGRRMLVFSQFTELL 683 Query: 82 ARLQKAFP----------QGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNI 131 A +Q + + + + E ++P+L + G GLNL + Sbjct: 684 ALVQTELDALDLPWLALTGATPVGQRAAIVAAFQERQVPILLISLKAGGVGLNLT-AADT 742 Query: 132 LVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQ 191 ++ WW+ +Q R + G + V VY LI + +I+E +L K+ + Sbjct: 743 VIHLDPWWNPAVEEQATAR-----AHRIGQTQTVLVYKLIVEGSIEERILALQARKAALA 797 Query: 192 DLLL 195 D ++ Sbjct: 798 DGVI 801 >gi|224541793|ref|ZP_03682332.1| hypothetical protein CATMIT_00965 [Catenibacterium mitsuokai DSM 15897] gi|224525290|gb|EEF94395.1| hypothetical protein CATMIT_00965 [Catenibacterium mitsuokai DSM 15897] Length = 1067 Score = 130 bits (327), Expect = 1e-28, Method: Composition-based stats. Identities = 44/199 (22%), Positives = 72/199 (36%), Gaps = 23/199 (11%) Query: 12 YCDLQGENIEAFNSASKTVKCLQLANGA-VYYDEEKHWKEVHDEKIKALEVIIE--KANA 68 + + + K Q+ + +D+ KH K++A II+ K N Sbjct: 859 LLKTLDGSKDRIQILAMLTKLRQICCEPRIVFDDVKH----KSSKMEACLNIIQTYKDNN 914 Query: 69 APIIVAYHFNSDLARLQKAFPQGRT----------LDKDPCTIQEWNEGKIPLLFAHPAS 118 IIV F S L L K + +T +K + + + + Sbjct: 915 KKIIVFSSFKSLLNLLAKELDKSKTSYYMLTGDTEKEKRKGLVDAYQNDDTTVFLISLKA 974 Query: 119 CGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDE 178 G GLNL +V F WW++ Q +R + G K VFVY LI ++I+E Sbjct: 975 GGTGLNLT-AAEGVVHFDPWWNMSAQNQATDR-----AYRIGQKNKVFVYKLIMADSIEE 1028 Query: 179 LVLQRLRTKSTIQDLLLNA 197 + K + D + Sbjct: 1029 KIQTLQAAKKDLADRFVEG 1047 >gi|324991286|gb|EGC23219.1| Snf2 family protein [Streptococcus sanguinis SK353] Length = 1033 Score = 130 bits (327), Expect = 1e-28, Method: Composition-based stats. Identities = 40/218 (18%), Positives = 85/218 (38%), Gaps = 30/218 (13%) Query: 1 MKQYHKFQRELYCDLQGENIE--AFNSASKTVKCLQLANGAVYYDEEKHWKEVHDE---K 55 + + ++ + I S ++ Q+ D K + E +D K Sbjct: 812 LALLKQM-QDRIIHATEDEINRSKIEILSGLMRLRQIC------DTPKLFMEDYDGESGK 864 Query: 56 IKALEVIIEKANA--APIIVAYHFNSDLARLQKAFPQ---------GRTLDKDPCTIQ-E 103 +++L ++E+ +++ F L ++ + G T K+ + Sbjct: 865 LESLRELLEQIQDGNRRVLIFSQFRGMLDIIESELDKLGMESFKITGSTPAKERQDMTTA 924 Query: 104 WNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKR 163 +N+G+ + G GLNL G + ++ LWW+ Q I R + G +R Sbjct: 925 FNDGQRSAFLISLKAGGVGLNLT-GADTVILVDLWWNPAVEAQAIGR-----AHRIGQER 978 Query: 164 AVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 V VY +I + TI+E + + +K + +L+ + + Sbjct: 979 NVEVYRMITRGTIEEKIQELQESKRNLVSTILDGAEAK 1016 >gi|293365804|ref|ZP_06612510.1| Snf2 family protein [Streptococcus oralis ATCC 35037] gi|307703327|ref|ZP_07640271.1| bacterial SNF2 helicase associated family protein [Streptococcus oralis ATCC 35037] gi|291315737|gb|EFE56184.1| Snf2 family protein [Streptococcus oralis ATCC 35037] gi|307623103|gb|EFO02096.1| bacterial SNF2 helicase associated family protein [Streptococcus oralis ATCC 35037] Length = 1031 Score = 130 bits (327), Expect = 1e-28, Method: Composition-based stats. Identities = 38/209 (18%), Positives = 80/209 (38%), Gaps = 25/209 (11%) Query: 9 RELYCDLQGENI--EAFNSASKTVKCLQLA-NGAVYYDEEKHWKEVHDEKIKALEVII-- 63 R+ + + S ++ Q+ A++ D+ + K+ +L ++ Sbjct: 815 RDRLAQVTDQEFQRSRVEILSGLMRLRQICDTPALFMDD----YQGASGKLDSLRDLLLQ 870 Query: 64 EKANAAPIIVAYHFNSDLARLQKAFP---------QGRTLDKDPCTI-QEWNEGKIPLLF 113 +++ F L ++++ P G T D + + +N+G+ Sbjct: 871 VADGGHRVLIFSQFKGMLEKIEQELPVLGLTSFKITGSTPAHDRQEMTKAFNQGERDAFL 930 Query: 114 AHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQ 173 + G GLNL G + ++ LWW+ Q I R + G ++ V VY LI + Sbjct: 931 ISLKAGGVGLNLT-GADTVILVDLWWNPAVEAQAIGR-----AHRMGQEQMVEVYRLITK 984 Query: 174 NTIDELVLQRLRTKSTIQDLLLNALKKET 202 TI+E + + K + +L+ + Sbjct: 985 GTIEEKIQELQEQKKHLVSQVLDGTESRA 1013 >gi|301336251|ref|ZP_07224453.1| SNF2 family helicase [Chlamydia muridarum MopnTet14] Length = 1163 Score = 130 bits (327), Expect = 1e-28, Method: Composition-based stats. Identities = 30/185 (16%), Positives = 69/185 (37%), Gaps = 18/185 (9%) Query: 24 NSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDL 81 + + + Q+ + + + K L ++ + +V + L Sbjct: 967 HVLATLTRLKQICCHPAIF-AKDTPEPGDSAKYDMLMDLLSSLVDSGHKTVVFSQYTKML 1025 Query: 82 ARLQK---------AFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNIL 132 +++ + G T ++ Q + + + + G GLNL G + + Sbjct: 1026 GIIRQDLEAKGIPFVYLDGSTKNRLEIVQQFNEDPNLLVFLVSLKAGGTGLNL-VGADTV 1084 Query: 133 VFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQD 192 + + +WW+ Q +R+ + G R+V Y L+ NTI+E +L K + Sbjct: 1085 IHYDMWWNPAVENQATDRV-----HRIGQNRSVSSYKLVTLNTIEEKILSLQNRKKGLVK 1139 Query: 193 LLLNA 197 ++N+ Sbjct: 1140 KVINS 1144 >gi|228996916|ref|ZP_04156549.1| Helicase, SWF/SNF [Bacillus mycoides Rock3-17] gi|228762795|gb|EEM11709.1| Helicase, SWF/SNF [Bacillus mycoides Rock3-17] Length = 1025 Score = 130 bits (327), Expect = 1e-28, Method: Composition-based stats. Identities = 43/214 (20%), Positives = 82/214 (38%), Gaps = 29/214 (13%) Query: 2 KQYH----KFQRELYCDLQGENI--EAFNSASKTVKCLQLANGA-VYYDEEKHWKEVHDE 54 K Y K + E L + + + + Q+ ++ D+ + Sbjct: 802 KLYAAYLAKLREETLKHLNKDTLRKNKIRILAGLTRLRQICCHPGLFVDDYR----GSSA 857 Query: 55 KIKALEVIIEK--ANAAPIIVAYHFNSDLARL-----QKAFPQGRTLDKDPCTIQ----- 102 K + L I+E+ + I++ F L+ + ++A P P + Sbjct: 858 KFEQLLEIVEECRSTGKRILIFSQFTKMLSIIGRELNRQAVPYFYLDGNTPAFERVELCN 917 Query: 103 EWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFK 162 +NEG+ L + G GLNL G + ++ + LWW+ QQ +R + G K Sbjct: 918 RFNEGEGDLFLISLRAGGTGLNLT-GADTVILYDLWWNPAVEQQAADR-----AYRMGQK 971 Query: 163 RAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 V V L+A TI+E + + +K + ++ Sbjct: 972 NTVQVIKLVAHGTIEEKMNELQESKKNLIAEVIE 1005 >gi|322391674|ref|ZP_08065142.1| Snf2 family protein [Streptococcus peroris ATCC 700780] gi|321145485|gb|EFX40878.1| Snf2 family protein [Streptococcus peroris ATCC 700780] Length = 1032 Score = 130 bits (327), Expect = 1e-28, Method: Composition-based stats. Identities = 35/193 (18%), Positives = 80/193 (41%), Gaps = 23/193 (11%) Query: 23 FNSASKTVKCLQLA-NGAVYYDEEKHWKEVHDEKIKALEVIIEKANA--APIIVAYHFNS 79 + ++ Q+ A++ ++ + K+ +L ++ + +++ F Sbjct: 832 VEILTGLMRLRQICDTPALFMND----YQGDSGKLDSLRDLLNQIGEANHRVLIFSQFRG 887 Query: 80 DLARLQKAFP---------QGRTLDKDPCTI-QEWNEGKIPLLFAHPASCGHGLNLQYGG 129 L R+++ P G T ++ + + +N+G+ + + G GLNL G Sbjct: 888 MLDRIEQELPHIGLTSFKITGSTPSQERQEMTKAFNQGERDVFLISLKAGGVGLNLT-GA 946 Query: 130 NILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKST 189 + ++ LWW+ Q I R + G ++AV VY L+ + TI+E + + K Sbjct: 947 DTVILVDLWWNPAVESQAISR-----AHRMGQEQAVEVYRLVTRGTIEEKIQELQEQKKN 1001 Query: 190 IQDLLLNALKKET 202 + +L+ + Sbjct: 1002 LVSEVLDGTESRG 1014 >gi|226355788|ref|YP_002785528.1| DNA helicase, SNF2/RAD54 protein family [Deinococcus deserti VCD115] gi|226317778|gb|ACO45774.1| putative DNA helicase, SNF2/RAD54 protein family [Deinococcus deserti VCD115] Length = 1132 Score = 130 bits (327), Expect = 1e-28, Method: Composition-based stats. Identities = 38/214 (17%), Positives = 82/214 (38%), Gaps = 24/214 (11%) Query: 7 FQRELYCDLQGENIEAFNSASK--TVKCLQLANGAVYYDEEKHWKEVHDEKIKALE---- 60 + + +L+ + A +K Q E + K + L+ Sbjct: 897 MESRVREELRARGLNRSTIAILDALLKLRQAVTDPRLVKLEAARNVQGNAKFEWLQGNLP 956 Query: 61 VIIEKANAAPIIVAYHFNSDLARLQK---------AFPQGRTLDKDPCTIQEWNEGKIPL 111 ++E+ +++ F + L+ L++ + G+T D+ I + G+ + Sbjct: 957 QMLEE--GRRVLIFSGFATLLSHLEQWLREEGTPYSMITGQTQDRQTQ-IDRFQNGETHV 1013 Query: 112 LFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLI 171 + G GLNL + ++ + WW+ Q +R + G + VFVY LI Sbjct: 1014 FLITLKAGGVGLNLT-AADTVIHYDPWWNPAAEDQATDR-----AYRIGQDKPVFVYKLI 1067 Query: 172 AQNTIDELVLQRLRTKSTIQDLLLNALKKETIHV 205 A +++E +L K+++ +L+ E + Sbjct: 1068 AAGSVEERILDLQSRKASLARGILDGGLSEATQL 1101 >gi|237795092|ref|YP_002862644.1| helicase, SNF2/RAD54 family [Clostridium botulinum Ba4 str. 657] gi|229260925|gb|ACQ51958.1| helicase, SNF2/RAD54 family [Clostridium botulinum Ba4 str. 657] Length = 1077 Score = 130 bits (327), Expect = 1e-28, Method: Composition-based stats. Identities = 48/213 (22%), Positives = 87/213 (40%), Gaps = 27/213 (12%) Query: 2 KQYHKF----QRELYCDLQGE--NIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEK 55 K Y F ++E Y +++ + N S + Q+ + E E + K Sbjct: 851 KVYASFAESAKKEFYKEIREKGFNKSKIKILSIITRLRQICCDPSTFIEN---YEGSNGK 907 Query: 56 IKALEVIIEKA--NAAPIIVAYHFNSDLARLQKAFP---------QGRTL-DKDPCTIQE 103 + L I++ + I++ F S L + + F G T D +++ Sbjct: 908 TETLLDIVDSSINAGHKILLFSQFTSVLKNIAEVFKINNINYLYLDGSTKADVRGSLVKD 967 Query: 104 WNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKR 163 +N GK + + G GLNL +I++ F WW+ Q +R + G K+ Sbjct: 968 FNNGKGDIFLISLKAGGTGLNLT-SADIVIHFDPWWNPAVEDQASDR-----AHRIGQKK 1021 Query: 164 AVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 V V LIA+ TI+E + + + K I D +++ Sbjct: 1022 TVEVIRLIAKGTIEEKIYKIQQKKKEIIDKVID 1054 >gi|255034080|ref|YP_003084701.1| Non-specific serine/threonine protein kinase [Dyadobacter fermentans DSM 18053] gi|254946836|gb|ACT91536.1| Non-specific serine/threonine protein kinase [Dyadobacter fermentans DSM 18053] Length = 1129 Score = 130 bits (327), Expect = 1e-28, Method: Composition-based stats. Identities = 37/177 (20%), Positives = 63/177 (35%), Gaps = 17/177 (9%) Query: 29 TVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANA-APIIVAYHFNSDLARLQKA 87 K Q+ N ++ + KI L IE I+V F S L ++ Sbjct: 939 LTKLRQICNSPALLRDD-LYYGDSSAKIDVLMEQIEDTAPWHKILVFSQFTSMLDLIRPR 997 Query: 88 FPQ---------GRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLW 138 + G+T D+ + + + G GLNL + + W Sbjct: 998 LEERGIGYEYLTGQTRDRGARVENFQTNAHVRIFLISLKAGGTGLNLTE-ADYVYLIDPW 1056 Query: 139 WDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 W+ Q I+R + G ++ V LI TI+E V++ TK + + L+ Sbjct: 1057 WNPAVENQAIDR-----SHRIGQQKNVIAVRLICPGTIEEKVMELQETKKDLANDLV 1108 >gi|168184681|ref|ZP_02619345.1| helicase, SNF2/RAD54 family [Clostridium botulinum Bf] gi|182672230|gb|EDT84191.1| helicase, SNF2/RAD54 family [Clostridium botulinum Bf] Length = 1077 Score = 130 bits (327), Expect = 1e-28, Method: Composition-based stats. Identities = 48/213 (22%), Positives = 87/213 (40%), Gaps = 27/213 (12%) Query: 2 KQYHKF----QRELYCDLQGE--NIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEK 55 K Y F ++E Y +++ + N S + Q+ + E E + K Sbjct: 851 KVYASFAESAKKEFYKEIREKGFNKSKIKILSIITRLRQICCDPSTFIEN---YEGSNGK 907 Query: 56 IKALEVIIEKA--NAAPIIVAYHFNSDLARLQKAFP---------QGRTL-DKDPCTIQE 103 + L I++ + I++ F S L + + F G T D +++ Sbjct: 908 TETLLDIVDSSINAGHKILLFSQFTSVLKNIAEVFKINNINYLYLDGSTKADVRGSLVKD 967 Query: 104 WNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKR 163 +N GK + + G GLNL +I++ F WW+ Q +R + G K+ Sbjct: 968 FNNGKGDIFLISLKAGGTGLNLT-SADIVIHFDPWWNPAVEDQASDR-----AHRIGQKK 1021 Query: 164 AVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 V V LIA+ TI+E + + + K I D +++ Sbjct: 1022 TVEVIRLIAKGTIEEKIYKIQQKKKEIIDKVID 1054 >gi|91214800|ref|ZP_01251773.1| DEAD/DEAH box helicase-like protein [Psychroflexus torquis ATCC 700755] gi|91187227|gb|EAS73597.1| DEAD/DEAH box helicase-like protein [Psychroflexus torquis ATCC 700755] Length = 1216 Score = 130 bits (327), Expect = 1e-28, Method: Composition-based stats. Identities = 39/210 (18%), Positives = 80/210 (38%), Gaps = 23/210 (10%) Query: 2 KQYHKFQ----RELYCDLQGENIEAFNSASK--TVKCLQLANGAVYYDEEKHWKEVHDEK 55 K Y +F+ +++ ++ E + K Q+ N D+EK + K Sbjct: 994 KVYDQFKDYFRQQILDQIENEGVNRSQIYILQGLTKLRQICNSTALADKEKDY-GNDSAK 1052 Query: 56 IKAL-EVIIEKANAAPIIVAYHFNSDLARLQKAFPQ---------GRTLDKDPCTIQEWN 105 + L + +K ++V F L +++ + G+T ++ N Sbjct: 1053 LDELVRHLKQKVAKHKVLVFSQFVGMLQLVKERLDEEDIKFEYLDGQTKKREEKVNNFQN 1112 Query: 106 EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 K+ + + G GLNL + + WW+ Q I+R + G + V Sbjct: 1113 NPKVRVFLISLKAGGTGLNLTE-ADYVYLIDPWWNPAVESQAIDRC-----YRIGQDKKV 1166 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 Y +I +++I+E +L K +I ++ Sbjct: 1167 MAYRMICKDSIEEKILSLQDKKKSIAADVI 1196 >gi|322386968|ref|ZP_08060592.1| Snf2 family protein [Streptococcus cristatus ATCC 51100] gi|321269250|gb|EFX52186.1| Snf2 family protein [Streptococcus cristatus ATCC 51100] Length = 1037 Score = 130 bits (326), Expect = 1e-28, Method: Composition-based stats. Identities = 41/215 (19%), Positives = 85/215 (39%), Gaps = 24/215 (11%) Query: 1 MKQYHKFQRELYCDLQGENIE--AFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKA 58 + + +E E I S ++ Q+ + + ++ + K+++ Sbjct: 812 LALLKQM-QERILHATEEEINRSKIEILSGLMRLRQICDTPKLFMDD---YDGESGKLES 867 Query: 59 LEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQ---------GRTLDKDPCTI-QEWNE 106 L ++E+ +++ F L +++ Q G T K+ + + +N+ Sbjct: 868 LRELLEQIQDGEHRVLIFSQFRGMLDIIEQELNQMGMESFKITGSTPAKERQEMTKAFNQ 927 Query: 107 GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVF 166 G+ + G GLNL G N ++ LWW+ Q I R + G +R V Sbjct: 928 GERSAFLISLKAGGVGLNLT-GANTVILVDLWWNPAVEAQAIGR-----AHRIGQERNVK 981 Query: 167 VYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 VY +I + TI+E + + TK + +L+ + Sbjct: 982 VYRMITRGTIEEKIQELQDTKRNLVSTILDGAESR 1016 >gi|237805059|ref|YP_002889213.1| putative helicase [Chlamydia trachomatis B/TZ1A828/OT] gi|231273359|emb|CAX10274.1| putative helicase [Chlamydia trachomatis B/TZ1A828/OT] Length = 1163 Score = 130 bits (326), Expect = 1e-28, Method: Composition-based stats. Identities = 29/185 (15%), Positives = 69/185 (37%), Gaps = 18/185 (9%) Query: 24 NSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDL 81 + + + Q+ + + + K L ++ + +V + L Sbjct: 967 HVLATLTRLKQICCHPAIF-AKDTPEPGDSAKYDMLMDLLSSLVDSGHKTVVFSQYTKML 1025 Query: 82 ARLQK---------AFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNIL 132 +++ + G T ++ Q + + + + G GLNL G + + Sbjct: 1026 GIIRQDLEAKGIPFVYLDGSTKNRLEIVQQFNEDPGLLVFLVSLKAGGTGLNL-VGADTV 1084 Query: 133 VFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQD 192 + + +WW+ Q +R+ + G R+V Y L+ NTI+E +L K + Sbjct: 1085 IHYDMWWNPAVENQATDRV-----HRIGQSRSVSSYKLVTLNTIEEKILSLQNRKKGLVK 1139 Query: 193 LLLNA 197 ++++ Sbjct: 1140 KVIDS 1144 >gi|225857148|ref|YP_002738659.1| Snf2 family protein [Streptococcus pneumoniae P1031] gi|225726227|gb|ACO22079.1| Snf2 family protein [Streptococcus pneumoniae P1031] Length = 1032 Score = 130 bits (326), Expect = 1e-28, Method: Composition-based stats. Identities = 35/208 (16%), Positives = 78/208 (37%), Gaps = 23/208 (11%) Query: 9 RELYCDLQGENI--EAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIE-- 64 R+ + + S ++ Q+ + + E+ + K+ +L ++ Sbjct: 816 RDHLAQVSEQEFQRSRVEILSGLMRLRQICDTPALFMED---YQGASGKLDSLRDLLVQV 872 Query: 65 KANAAPIIVAYHFNSDLARLQKAFPQ---------GRTLDKDPCTI-QEWNEGKIPLLFA 114 +++ F L ++++ G T K+ + + +N+G+ Sbjct: 873 ADGGHRVLIFSQFKGMLEKIEQELSDLGLTSFKITGSTPAKERQDMTKAFNQGERDAFLI 932 Query: 115 HPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQN 174 + G GLNL G + ++ LWW+ Q I R + G + V VY L+ + Sbjct: 933 SLKAGGVGLNL-SGADTVILVDLWWNPAVEAQAIGR-----AHRMGQEETVEVYRLVTKG 986 Query: 175 TIDELVLQRLRTKSTIQDLLLNALKKET 202 TI+E + + K + +L+ + Sbjct: 987 TIEEKIQELQEQKKHLVSQVLDGTESRG 1014 >gi|76789448|ref|YP_328534.1| SWF/SNF family helicase [Chlamydia trachomatis A/HAR-13] gi|76167978|gb|AAX50986.1| SWF/SNF family helicase [Chlamydia trachomatis A/HAR-13] Length = 1163 Score = 130 bits (326), Expect = 1e-28, Method: Composition-based stats. Identities = 29/185 (15%), Positives = 69/185 (37%), Gaps = 18/185 (9%) Query: 24 NSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDL 81 + + + Q+ + + + K L ++ + +V + L Sbjct: 967 HVLATLTRLKQICCHPAIF-AKDTPEPGDSAKYDMLMDLLSSLVDSGHKTVVFSQYTKML 1025 Query: 82 ARLQK---------AFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNIL 132 +++ + G T ++ Q + + + + G GLNL G + + Sbjct: 1026 GIIRQDLEAKGIPFVYLDGSTKNRLEIVQQFNEDPGLLVFLVSLKAGGTGLNL-VGADTV 1084 Query: 133 VFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQD 192 + + +WW+ Q +R+ + G R+V Y L+ NTI+E +L K + Sbjct: 1085 IHYDMWWNPAVENQATDRV-----HRIGQSRSVSSYKLVTLNTIEEKILSLQNRKKGLVK 1139 Query: 193 LLLNA 197 ++++ Sbjct: 1140 KVIDS 1144 >gi|104782726|ref|YP_609224.1| Snf2/Rad54 family helicase [Pseudomonas entomophila L48] gi|95111713|emb|CAK16437.1| helicase, SNF2/RAD54 family [Pseudomonas entomophila L48] Length = 1108 Score = 130 bits (326), Expect = 2e-28, Method: Composition-based stats. Identities = 29/141 (20%), Positives = 60/141 (42%), Gaps = 16/141 (11%) Query: 69 APIIVAYHFNSDLARL---------QKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASC 119 +++ F S LA + + + G T D+ +Q++ G+ + + Sbjct: 952 RKVLLFSQFTSMLALIEFELEKRGVRYSLLTGDTRDRR-APVQQFQNGESDVFLISLKAG 1010 Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 G GLNL + ++ + WW+ Q +R + G + VFV+ LI + T++E Sbjct: 1011 GTGLNLT-AADTVIHYDPWWNPASENQATDR-----AYRIGQDKPVFVFKLITRGTVEEK 1064 Query: 180 VLQRLRTKSTIQDLLLNALKK 200 + + K+ + LL+ + Sbjct: 1065 IQLLQQEKAALAAGLLDGGQA 1085 >gi|311742708|ref|ZP_07716517.1| helicase [Aeromicrobium marinum DSM 15272] gi|311314336|gb|EFQ84244.1| helicase [Aeromicrobium marinum DSM 15272] Length = 717 Score = 130 bits (326), Expect = 2e-28, Method: Composition-based stats. Identities = 28/183 (15%), Positives = 66/183 (36%), Gaps = 23/183 (12%) Query: 26 ASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLAR 83 + +C Q+ + + K+ L+ +++ A +V + Sbjct: 524 LALITRCKQVCDHPALVE-----HRGASAKLDVLDDLVDTIVAEDGRALVFTQYVRMGEL 578 Query: 84 LQKAFPQGRT----------LDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILV 133 L + + + + + E+ G +P+L + G GLNL + ++ Sbjct: 579 LVDHWTEREVSHRFLHGSLPVGQRQRMVDEFQAGDLPVLLLSLRAGGTGLNLT-AADHVI 637 Query: 134 FFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDL 193 + WW+ Q +R + G + V V+ L T+++ + + K + D Sbjct: 638 HYDRWWNPAVEDQATDR-----AHRIGQTKPVQVHRLTVGGTVEDGIADLIERKRALADA 692 Query: 194 LLN 196 ++N Sbjct: 693 VIN 695 >gi|237803138|ref|YP_002888332.1| putative helicase [Chlamydia trachomatis B/Jali20/OT] gi|231274372|emb|CAX11167.1| putative helicase [Chlamydia trachomatis B/Jali20/OT] Length = 1163 Score = 130 bits (326), Expect = 2e-28, Method: Composition-based stats. Identities = 29/185 (15%), Positives = 69/185 (37%), Gaps = 18/185 (9%) Query: 24 NSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDL 81 + + + Q+ + + + K L ++ + +V + L Sbjct: 967 HVLATLTRLKQICCHPAIF-AKDTPEPGDSAKYDMLMDLLSSLVDSGHKTVVFSQYTKML 1025 Query: 82 ARLQK---------AFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNIL 132 +++ + G T ++ Q + + + + G GLNL G + + Sbjct: 1026 GIIRQDLEAKGIPFVYLDGSTKNRLEIVQQFNEDPGLLVFLVSLKAGGTGLNL-VGADTV 1084 Query: 133 VFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQD 192 + + +WW+ Q +R+ + G R+V Y L+ NTI+E +L K + Sbjct: 1085 IHYDMWWNPAVENQATDRV-----HRIGQSRSVSSYKLVTLNTIEEKILSLQNRKKGLVK 1139 Query: 193 LLLNA 197 ++++ Sbjct: 1140 KVIDS 1144 >gi|256419374|ref|YP_003120027.1| SNF2-related protein [Chitinophaga pinensis DSM 2588] gi|256034282|gb|ACU57826.1| SNF2-related protein [Chitinophaga pinensis DSM 2588] Length = 1354 Score = 130 bits (326), Expect = 2e-28, Method: Composition-based stats. Identities = 39/186 (20%), Positives = 71/186 (38%), Gaps = 21/186 (11%) Query: 24 NSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKA--NAAPIIVAYHF-NS- 79 N+ ++ K A D E + K+ I+++ N +V + Sbjct: 1157 NTLTEIGKLRMAACNTQMIDPE---IRIPSSKLAVFIEIVKELIDNNHRALVFSQYVKHL 1213 Query: 80 DLARLQ-------KAFPQGRT-LDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNI 131 DL RL + G T + ++E+ G L + G GLNL + Sbjct: 1214 DLVRLALDELNVSYCYLDGSTPIPVRERVVKEFQAGAGSLFLISLKAGGTGLNLT-AADY 1272 Query: 132 LVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQ 191 ++ WW+ +Q +R + G R V +Y L+ ++TI+E ++ +K + Sbjct: 1273 VIHLDPWWNPAIEEQASDR-----AYRIGQTRPVTIYRLVTRHTIEEKIIALHNSKRDLA 1327 Query: 192 DLLLNA 197 D LL Sbjct: 1328 DRLLEG 1333 >gi|328474032|gb|EGF44843.1| SNF2 family helicase [Listeria monocytogenes 220] Length = 1038 Score = 129 bits (325), Expect = 2e-28, Method: Composition-based stats. Identities = 40/198 (20%), Positives = 75/198 (37%), Gaps = 21/198 (10%) Query: 1 MKQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 + K Q +L + E + + Q+ + E + K+ L Sbjct: 847 LAYLEKIQADLEASNGNASEERIKLLAGLTRLRQICCDPSLFVEN---YQGESGKLLQLF 903 Query: 61 VIIEKA--NAAPIIVAYHFNSDLARLQKAFPQ---------GRTLDKDPCT-IQEWNEGK 108 I+ A N I++ F L +++ + G+T K + +NEG+ Sbjct: 904 DTIQTARENGKRILLFSQFTGMLGIIRQKLEEDGQTLFYMDGKTPSKTRLDMVNAFNEGE 963 Query: 109 IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVY 168 + + G GLNL G + ++ + LWW+ +Q R + G KR V V+ Sbjct: 964 NDIFLISLKAGGTGLNL-VGADTVILYDLWWNPAVEEQATGR-----AHRIGQKRVVQVF 1017 Query: 169 YLIAQNTIDELVLQRLRT 186 +I + TI+E + + Sbjct: 1018 RMITKGTIEERIFDLQKK 1035 >gi|284032554|ref|YP_003382485.1| SNF2-like protein [Kribbella flavida DSM 17836] gi|283811847|gb|ADB33686.1| SNF2-related protein [Kribbella flavida DSM 17836] Length = 979 Score = 129 bits (325), Expect = 2e-28, Method: Composition-based stats. Identities = 35/213 (16%), Positives = 82/213 (38%), Gaps = 22/213 (10%) Query: 3 QYHKFQRELYCDLQ-GENIEAFN-SASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 Y RE ++ + IE S + Q+ N + E K+ AL+ Sbjct: 736 LYQAVARETLAKIEQAQGIERRGLVLSLLTQLKQVCNHPAQFLHEPGPLPRRSGKLAALD 795 Query: 61 VIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTLD-----------KDPCTIQEWNEG 107 +++ A +++ + ++ RL +A R + + ++++ G Sbjct: 796 ELLDVILAEGESVLIFSQYV-EMGRLIEAHLAARQIGALFLHGGVGVRRRQQMVEQFQAG 854 Query: 108 KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFV 167 + + + G GL L + +V + WW+ Q +R + G R V V Sbjct: 855 ESQVFLLSLKAGGVGLTLTKATH-VVHYDRWWNPAVEDQATDR-----AYRIGQDRPVQV 908 Query: 168 YYLIAQNTIDELVLQRLRTKSTIQDLLLNALKK 200 + L+ ++T+++ + + K + D ++ + + Sbjct: 909 HRLVTEHTLEDRIATVIAAKRELADAVIGSGEA 941 >gi|224826766|ref|ZP_03699866.1| Non-specific serine/threonine protein kinase [Lutiella nitroferrum 2002] gi|224600986|gb|EEG07169.1| Non-specific serine/threonine protein kinase [Lutiella nitroferrum 2002] Length = 1370 Score = 129 bits (325), Expect = 2e-28, Method: Composition-based stats. Identities = 38/212 (17%), Positives = 77/212 (36%), Gaps = 24/212 (11%) Query: 1 MKQYHKFQRELYCDLQ---GENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIK 57 + Y +++ L ++ + ++ + + + E+ K+K Sbjct: 1149 LHLYEALRQQAVDKLDALGEQDNKPLKVLAEITRLRRFCCHPRLALPD---SELAGSKLK 1205 Query: 58 ALEVIIEKA--NAAPIIVAYHFNS---------DLARLQKAFPQGRTLDKDPCT-IQEWN 105 A I ++ N +V F D + + G T ++ + + Sbjct: 1206 AFAEIADELLENRHKALVFSQFVDHLAIVRAWLDERGIAYQYLDGSTPARERKARVDAFQ 1265 Query: 106 EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 G+ L + G GLNL + ++ WW+ Q +R + G +R V Sbjct: 1266 AGQGDLFLISLKAGGTGLNLT-AADYVIHLDPWWNPAVEDQASDR-----AHRMGQQRPV 1319 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 VY L+A++TI+E ++ K + D LL Sbjct: 1320 TVYRLVAEHTIEEQIVALHAAKRDLADSLLEG 1351 >gi|104781117|ref|YP_607615.1| SNF2 family DNA helicase [Pseudomonas entomophila L48] gi|95110104|emb|CAK14811.1| putative DNA helicases, SNF2 family [Pseudomonas entomophila L48] Length = 946 Score = 129 bits (325), Expect = 2e-28, Method: Composition-based stats. Identities = 34/210 (16%), Positives = 73/210 (34%), Gaps = 24/210 (11%) Query: 3 QYHKFQRELYC---DLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKAL 59 Y +++ DL +F ++ + + + K +A+ Sbjct: 725 LYEALRQQAVSNVSDLAPGAGRSFQILTEITRLRRFCCHPALVTPGST---LPGSKFQAV 781 Query: 60 EVIIEKA--NAAPIIVAYHFNSDLARLQ----------KAFPQGRTLDKDPCTIQEWNEG 107 I+E+ N ++ + L+ ++ + + + + G Sbjct: 782 TAIVEELLDNGHKALIFSQYVDHLSIVRTWFDEKGIAYQYLDGSVPAKERESRVNAFQAG 841 Query: 108 KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFV 167 + + G GLNL + ++ WW+ Q +R + G +R V + Sbjct: 842 AGEVFLISLKAGGSGLNLT-AADYVIHLDPWWNPAVEDQASDR-----AYRIGQQRPVTI 895 Query: 168 YYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 Y L+A+NTI+E ++ K + D LL Sbjct: 896 YRLVAENTIEEQIVALHARKRDLADSLLEG 925 >gi|261420703|ref|YP_003254385.1| SNF2-related protein [Geobacillus sp. Y412MC61] gi|319768373|ref|YP_004133874.1| SNF2-related protein [Geobacillus sp. Y412MC52] gi|261377160|gb|ACX79903.1| SNF2-related protein [Geobacillus sp. Y412MC61] gi|317113239|gb|ADU95731.1| SNF2-related protein [Geobacillus sp. Y412MC52] Length = 924 Score = 129 bits (325), Expect = 2e-28, Method: Composition-based stats. Identities = 43/218 (19%), Positives = 78/218 (35%), Gaps = 33/218 (15%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANG--------AVYYDEEKHWKEVH- 52 Y + + E + + ++ LQ+ NG A+Y E + + V Sbjct: 692 ALYEQLVNDTL-----ERAKEASPFARRGLILQMLNGVKQICDHPALYLKERRPRQLVER 746 Query: 53 DEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQ-----------GRTLDKDPC 99 K++ L +IE+ N ++ + +Q+ G Sbjct: 747 SHKLEKLIELIEQIRTNDESCLIFTQYVRMGEMIQELLSDLFDEPVLFLHGGVPKQTRDR 806 Query: 100 TIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQA 159 + E+ K P+ + G GLNL N ++ F WW+ Q +R + Sbjct: 807 MVDEFQAKKAPIFLLSLKAGGTGLNLT-AANHVIHFDRWWNPAVENQATDR-----AYRI 860 Query: 160 GFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 G + V V+ LI TI+E + + L K + DL+ Sbjct: 861 GQTKFVHVHKLITIGTIEEKIDEMLEQKQALADLITEG 898 >gi|294056264|ref|YP_003549922.1| SNF2-related protein [Coraliomargarita akajimensis DSM 45221] gi|293615597|gb|ADE55752.1| SNF2-related protein [Coraliomargarita akajimensis DSM 45221] Length = 1024 Score = 129 bits (325), Expect = 2e-28, Method: Composition-based stats. Identities = 44/206 (21%), Positives = 84/206 (40%), Gaps = 22/206 (10%) Query: 5 HKFQRELY-CDLQGENIEAFNSAS--KTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEV 61 K +RE++ ++ G N A+ + ++ Q DE + K+ A + Sbjct: 805 EKTRREIFNLEMGGANAGRLQFAAFKELLRLRQACVDPRILDE--TFAASESAKLAAFDE 862 Query: 62 IIEK--ANAAPIIVAYHFNSDLARLQKAFP---------QGRTLDKDPCTIQEWNEGKIP 110 ++++ N + ++V F S L L + G+T ++ + + IP Sbjct: 863 VLDECLDNGSRMLVFSSFVSALQLLAQHLKAKGHRFNYLDGQTKNRLALCDEFNEDASIP 922 Query: 111 LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYL 170 + + G GLNL G + +V + WW+ Q +R + G ++ V L Sbjct: 923 VFLISLKAGGTGLNLT-GADTVVHYDPWWNPAAEAQATDR-----AHRIGQEKVVTSIKL 976 Query: 171 IAQNTIDELVLQRLRTKSTIQDLLLN 196 IA NT++E VL+ K+ + L Sbjct: 977 IAANTVEEKVLELQAKKAELLAELFE 1002 >gi|113866590|ref|YP_725079.1| SNF2 family DNA/RNA helicase [Ralstonia eutropha H16] gi|113525366|emb|CAJ91711.1| Superfamily II DNA/RNA helicase, SNF2 family [Ralstonia eutropha H16] Length = 1023 Score = 129 bits (325), Expect = 2e-28, Method: Composition-based stats. Identities = 35/186 (18%), Positives = 68/186 (36%), Gaps = 18/186 (9%) Query: 24 NSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDL 81 + ++ ++ + A E + K++A + + A+ +V F L Sbjct: 820 HVLAQLMRLRRAACDPRLVTPELSGQLSEGAKVRAFVELASELAASGHKTLVFSQFVDFL 879 Query: 82 ARLQKAFPQGRTL----------DKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNI 131 L++ + + + + G+ + + G GLNL + Sbjct: 880 QLLRQGLERAGLALQYLDGATPAAERTRRVAAFQAGEGDVFLISLKAGGFGLNLT-AADY 938 Query: 132 LVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQ 191 ++ WW+ Q + R + G +R V VY LI TI+E ++ R K + Sbjct: 939 VIIADPWWNPAAEDQAMGR-----AHRIGQQRPVTVYRLINAGTIEERIVDLHRDKRALA 993 Query: 192 DLLLNA 197 D LL A Sbjct: 994 DGLLEA 999 >gi|126348422|emb|CAJ90145.1| putative helicase [Streptomyces ambofaciens ATCC 23877] Length = 976 Score = 129 bits (325), Expect = 2e-28, Method: Composition-based stats. Identities = 42/214 (19%), Positives = 84/214 (39%), Gaps = 23/214 (10%) Query: 3 QYHKFQRELYCDLQGENIEAFNSA--SKTVKCLQLANG-AVYYDEEKHWKEVHDEKIKAL 59 Y RE ++ G + A Q+ N A + E++ K++ L Sbjct: 749 LYEAVVREALAEIAGADSMARRGMIVKLLTSLKQICNHPAQFLKEDRPRITGRSGKLELL 808 Query: 60 EVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTLDK-----------DPCTIQEWNE 106 + +++ A + ++V + ARL + R + ++ + + Sbjct: 809 DELLDTILAEESSVLVFTQYVQM-ARLLERHLTARGVSSLFLHGGTSVTARESLVRRFQD 867 Query: 107 GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVF 166 G++P+ + G GLNL + +V F WW+ Q +R + G R V Sbjct: 868 GEVPVFLLSLKAAGTGLNLTRAEH-VVHFDRWWNPAVEAQATDR-----AYRIGQTRPVQ 921 Query: 167 VYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKK 200 V+ L+A+ T+++ + L K + D +L A + Sbjct: 922 VHRLVAEGTVEDRIAALLHRKRKLADAVLGAGEA 955 >gi|319949229|ref|ZP_08023314.1| SNF2-related protein [Dietzia cinnamea P4] gi|319437114|gb|EFV92149.1| SNF2-related protein [Dietzia cinnamea P4] Length = 818 Score = 129 bits (325), Expect = 2e-28, Method: Composition-based stats. Identities = 45/210 (21%), Positives = 80/210 (38%), Gaps = 22/210 (10%) Query: 2 KQYH-KFQRE---LYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEE--KHWKEVHDEK 55 + Y + R+ L L + + +L A D + DE Sbjct: 599 RIYERELARQRASLLALLDDFESNRISILAGLTVLRRLCLDASLVDPDHLGVASAKTDEL 658 Query: 56 IKALEVIIEKANAAPIIVAYHFNSDLA----RLQKAFPQGRTLDKDPCT----IQEWNEG 107 I AL ++ A +V F + L RL+ LD + E+ EG Sbjct: 659 IAALREVV--AEGHRALVFSQFTTYLDTVVARLRDEGITVAHLDGSTTDRAGAVGEFTEG 716 Query: 108 KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFV 167 + + G GLNL G + + WW+ Q ++R + G R V V Sbjct: 717 GAQVFCLSLKAGGVGLNL-VGADYVFLLDPWWNPATEAQAVDR-----AHRIGQTRPVLV 770 Query: 168 YYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 Y ++A++TI+E V++ + K+ + +L++ Sbjct: 771 YRMVARDTIEERVVELQQRKAELFASVLDS 800 >gi|260221226|emb|CBA29577.1| hypothetical protein Csp_A12850 [Curvibacter putative symbiont of Hydra magnipapillata] Length = 784 Score = 129 bits (324), Expect = 3e-28, Method: Composition-based stats. Identities = 34/184 (18%), Positives = 67/184 (36%), Gaps = 18/184 (9%) Query: 24 NSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDL 81 + +K Q+ ++ K+ AL ++ ++V F L Sbjct: 558 SILDALLKLRQVCCDPYLVKGSDIAPDMERAKLHALTDLLVPLVDEGRRVLVFSQFTELL 617 Query: 82 ARLQKAFPQGRTL----------DKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNI 131 + A R + +Q + ++P+L + G GLNL + Sbjct: 618 ELIADALSALRLPFLSLTGNTCPAQRGDIVQRFQNQEVPVLLVSLKTGGVGLNLT-AADT 676 Query: 132 LVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQ 191 ++ WW+ +Q R + G + VFVY L+ + +I+E +L+ K + Sbjct: 677 VIHMDPWWNPAVEEQATAR-----AHRIGQDQPVFVYKLVVEGSIEERMLELQARKLALS 731 Query: 192 DLLL 195 D +L Sbjct: 732 DSVL 735 >gi|15605441|ref|NP_220227.1| SWF/SNF family helicase [Chlamydia trachomatis D/UW-3/CX] gi|255311538|ref|ZP_05354108.1| SWF/SNF family helicase [Chlamydia trachomatis 6276] gi|255317839|ref|ZP_05359085.1| SWF/SNF family helicase [Chlamydia trachomatis 6276s] gi|255349101|ref|ZP_05381108.1| SWF/SNF family helicase [Chlamydia trachomatis 70] gi|255503638|ref|ZP_05382028.1| SWF/SNF family helicase [Chlamydia trachomatis 70s] gi|255507317|ref|ZP_05382956.1| SWF/SNF family helicase [Chlamydia trachomatis D(s)2923] gi|3329163|gb|AAC68303.1| SWF/SNF family helicase [Chlamydia trachomatis D/UW-3/CX] gi|289525752|emb|CBJ15233.1| putative helicase [Chlamydia trachomatis Sweden2] gi|296435325|gb|ADH17503.1| SWF/SNF family helicase [Chlamydia trachomatis E/150] gi|296436253|gb|ADH18427.1| SWF/SNF family helicase [Chlamydia trachomatis G/9768] gi|296437182|gb|ADH19352.1| SWF/SNF family helicase [Chlamydia trachomatis G/11222] gi|296438113|gb|ADH20274.1| SWF/SNF family helicase [Chlamydia trachomatis G/11074] gi|296439042|gb|ADH21195.1| SWF/SNF family helicase [Chlamydia trachomatis E/11023] gi|297140614|gb|ADH97372.1| SWF/SNF family helicase [Chlamydia trachomatis G/9301] gi|297748839|gb|ADI51385.1| SWF/SNF family helicase [Chlamydia trachomatis D-EC] gi|297749719|gb|ADI52397.1| SWF/SNF family helicase [Chlamydia trachomatis D-LC] Length = 1163 Score = 129 bits (324), Expect = 3e-28, Method: Composition-based stats. Identities = 30/185 (16%), Positives = 69/185 (37%), Gaps = 18/185 (9%) Query: 24 NSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDL 81 + + + Q+ + + + K L ++ + +V + L Sbjct: 967 HVLATLTRLKQICCHPAIF-AKDTPEPGDSAKYDMLMDLLSSLVDSGHKTVVFSQYTKML 1025 Query: 82 ARLQK---------AFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNIL 132 +++ + G T ++ Q + + + + G GLNL G + + Sbjct: 1026 GIIRQDLEAKGIPFVYLDGSTKNRLEIVQQFNEDPGLLVFLVSLKAGGTGLNL-VGADTV 1084 Query: 133 VFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQD 192 + + +WW+ Q +R+ + G R+V Y L+ NTI+E +L K + Sbjct: 1085 IHYDMWWNPAVENQATDRV-----HRIGQSRSVSSYKLVTLNTIEEKILSLQNRKKGLVK 1139 Query: 193 LLLNA 197 ++N+ Sbjct: 1140 KVINS 1144 >gi|229004592|ref|ZP_04162330.1| Helicase, SWF/SNF [Bacillus mycoides Rock1-4] gi|228756633|gb|EEM05940.1| Helicase, SWF/SNF [Bacillus mycoides Rock1-4] Length = 887 Score = 129 bits (324), Expect = 3e-28, Method: Composition-based stats. Identities = 41/206 (19%), Positives = 80/206 (38%), Gaps = 25/206 (12%) Query: 6 KFQRELYCDLQGENI--EAFNSASKTVKCLQLANGA-VYYDEEKHWKEVHDEKIKALEVI 62 K + E L + + + + Q+ ++ D+ + K + L I Sbjct: 672 KLREETLKHLNKDTLRKNKIRILAGLTRLRQICCHPGLFVDDYR----GSSAKFEQLLEI 727 Query: 63 IEK--ANAAPIIVAYHFNSDLARL-----QKAFPQGRTLDKDPCTIQ-----EWNEGKIP 110 +E+ + I++ F L+ + ++A P P + +NEG+ Sbjct: 728 VEECRSTGKRILIFSQFTKMLSIIGRELNRQAVPYFYLDGNTPAFERVELCNRFNEGEGD 787 Query: 111 LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYL 170 L + G GLNL G + ++ + LWW+ QQ +R + G K V V L Sbjct: 788 LFLISLRAGGTGLNLT-GADTVILYDLWWNPAVEQQAADR-----AYRMGQKNTVQVIKL 841 Query: 171 IAQNTIDELVLQRLRTKSTIQDLLLN 196 +A TI+E + + +K + ++ Sbjct: 842 VAHGTIEEKMNELQESKKNLIAEVIE 867 >gi|187779662|ref|ZP_02996135.1| hypothetical protein CLOSPO_03258 [Clostridium sporogenes ATCC 15579] gi|187773287|gb|EDU37089.1| hypothetical protein CLOSPO_03258 [Clostridium sporogenes ATCC 15579] Length = 1077 Score = 129 bits (324), Expect = 3e-28, Method: Composition-based stats. Identities = 49/213 (23%), Positives = 85/213 (39%), Gaps = 27/213 (12%) Query: 2 KQYHKF----QRELYCDL--QGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEK 55 K Y F + E Y ++ +G N S + Q+ + E E + K Sbjct: 851 KVYASFAESAKEEFYKEIKERGFNKSKIKILSIITRLRQICCDPSTFIEN---YEGSNGK 907 Query: 56 IKALEVIIEKA--NAAPIIVAYHFNSDLARLQKAFP---------QGRTL-DKDPCTIQE 103 I+ L I+ I++ F S L + + F G T + +++ Sbjct: 908 IETLLDIVNSNINEGHKILLFSQFTSVLKNISEVFKANNINYLYLDGSTKANVRGSLVKD 967 Query: 104 WNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKR 163 +N GK + + G GLNL +I++ F WW+ Q +R + G K+ Sbjct: 968 FNNGKGDIFLISLKAGGTGLNLT-SADIVIHFDPWWNPAVEDQASDR-----AHRIGQKK 1021 Query: 164 AVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 V V LIA+ TI+E + + + K I D +++ Sbjct: 1022 TVEVIRLIAKGTIEEKIYKIQQKKKEIIDKVID 1054 >gi|166154925|ref|YP_001653180.1| putative helicase [Chlamydia trachomatis L2b/UCH-1/proctitis] gi|165930913|emb|CAP06475.1| putative helicase [Chlamydia trachomatis L2b/UCH-1/proctitis] Length = 1163 Score = 129 bits (324), Expect = 3e-28, Method: Composition-based stats. Identities = 30/185 (16%), Positives = 69/185 (37%), Gaps = 18/185 (9%) Query: 24 NSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDL 81 + + + Q+ + + + K L ++ + +V + L Sbjct: 967 HVLATLTRLKQICCHPAIF-AKDTPEPGDSAKYDMLMDLLSSLVDSGHKTVVFSQYTKML 1025 Query: 82 ARLQK---------AFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNIL 132 +++ + G T ++ Q + + + + G GLNL G + + Sbjct: 1026 GIIRQDLEAKGIPFVYLDGSTKNRLEIVQQFNEDPGLLVFLVSLKAGGTGLNL-VGADTV 1084 Query: 133 VFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQD 192 + + +WW+ Q +R+ + G R+V Y L+ NTI+E +L K + Sbjct: 1085 IHYDMWWNPAVENQATDRV-----HRIGQSRSVSSYKLVTLNTIEEKILSLQNRKKGLVK 1139 Query: 193 LLLNA 197 ++N+ Sbjct: 1140 KVINS 1144 >gi|166154050|ref|YP_001654168.1| putative helicase [Chlamydia trachomatis 434/Bu] gi|301335252|ref|ZP_07223496.1| putative helicase [Chlamydia trachomatis L2tet1] gi|165930038|emb|CAP03521.1| putative helicase [Chlamydia trachomatis 434/Bu] Length = 1163 Score = 129 bits (324), Expect = 3e-28, Method: Composition-based stats. Identities = 30/185 (16%), Positives = 69/185 (37%), Gaps = 18/185 (9%) Query: 24 NSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDL 81 + + + Q+ + + + K L ++ + +V + L Sbjct: 967 HVLATLTRLKQICCHPAIF-AKDTPEPGDSAKYDMLMDLLSSLVDSGHKTVVFSQYTKML 1025 Query: 82 ARLQK---------AFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNIL 132 +++ + G T ++ Q + + + + G GLNL G + + Sbjct: 1026 GIIRQDLEAKGIPFVYLDGSTKNRLEIVQQFNEDPGLLVFLVSLKAGGTGLNL-VGADTV 1084 Query: 133 VFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQD 192 + + +WW+ Q +R+ + G R+V Y L+ NTI+E +L K + Sbjct: 1085 IHYDMWWNPAVENQATDRV-----HRIGQSRSVSSYKLVTLNTIEEKILSLQNRKKGLVK 1139 Query: 193 LLLNA 197 ++N+ Sbjct: 1140 KVINS 1144 >gi|302340105|ref|YP_003805311.1| SNF2-related protein [Spirochaeta smaragdinae DSM 11293] gi|301637290|gb|ADK82717.1| SNF2-related protein [Spirochaeta smaragdinae DSM 11293] Length = 1046 Score = 129 bits (324), Expect = 3e-28, Method: Composition-based stats. Identities = 38/212 (17%), Positives = 81/212 (38%), Gaps = 26/212 (12%) Query: 2 KQYHKFQRELYCDLQG------ENIEAFNS-ASKTVKCLQLANGAVYYDEEKHWKEVHDE 54 + Y + + + +++ +++ N+ ++ Q A + DE+ D Sbjct: 825 RFYTRLKESMRAEVKSLIDAKPGSLKVANAILMALLRLRQAAISPILLDEKPETSSKLDV 884 Query: 55 KIKALEVIIEKANAAPIIVAYHF---------NSDLARLQKAFPQGRTLDK-DPCTIQEW 104 I+ LE ++ A +++ F + ++ A+ G + I+ + Sbjct: 885 VIQLLETLL--AEGHKVLIFSQFVKVLSLLRARLEAKEMEYAYLDGSLGTRAREQAIRSF 942 Query: 105 NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA 164 K + + G GLNL + + WW+ Q I+R + G +R Sbjct: 943 KNAK-GIFLISLKAGGTGLNLTEADYVFIL-DPWWNPAVESQAIDR-----SHRIGQRRP 995 Query: 165 VFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 V Y IA T++E +++ K I + LL+ Sbjct: 996 VIAYKFIATGTVEERIIELQEQKRRIANELLS 1027 >gi|149280534|ref|ZP_01886651.1| superfamily II DNA/RNA helicase, SNF2 family protein [Pedobacter sp. BAL39] gi|149228716|gb|EDM34118.1| superfamily II DNA/RNA helicase, SNF2 family protein [Pedobacter sp. BAL39] Length = 964 Score = 129 bits (324), Expect = 3e-28, Method: Composition-based stats. Identities = 34/177 (19%), Positives = 70/177 (39%), Gaps = 18/177 (10%) Query: 29 TVKCLQLANGAVYYDEE-KHWKEVHDEKIKALEVIIEKANAAPIIVAYHF-NS------- 79 QLAN + DE + + I L+ +++ +++ F Sbjct: 776 LTALRQLANHPLMIDESYESDSGKFENVIHTLDNVLK--GGHKVLIFSQFVKHLSIFRNY 833 Query: 80 -DLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLW 138 + ++ ++ G T ++ + + + + G GLNL + + W Sbjct: 834 FEKEQIPFSYLDGSTKNRGEIVAEFQENKDLKVFLISIKAGGVGLNLTQADYVFIL-DPW 892 Query: 139 WDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 W+ QQ I+R + G + VF+Y IA++T++E +L K T+ + L+ Sbjct: 893 WNPAVEQQAIDR-----SHRIGQDKKVFIYKFIAKDTVEEKILALQNRKKTLANALI 944 >gi|196250406|ref|ZP_03149098.1| Non-specific serine/threonine protein kinase [Geobacillus sp. G11MC16] gi|196210065|gb|EDY04832.1| Non-specific serine/threonine protein kinase [Geobacillus sp. G11MC16] Length = 926 Score = 129 bits (324), Expect = 3e-28, Method: Composition-based stats. Identities = 42/218 (19%), Positives = 78/218 (35%), Gaps = 33/218 (15%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANG--------AVYYDEEKHWKEVH- 52 Y + + E +A + ++ LQ+ NG A+Y E + V Sbjct: 694 ALYEQLVNDTL-----ERAKAASPFARRGLILQMLNGIKQICNHPALYLKERSPRQLVER 748 Query: 53 DEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQ-----------GRTLDKDPC 99 K++ L ++E+ AN ++ + +Q+ Sbjct: 749 SHKLEKLVELVEQIRANDESCLIFTQYVRMGEMIQELLSDLFDEPVLFLNGSVPKPTRDR 808 Query: 100 TIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQA 159 + E+ K P+ + G GLNL N ++ F WW+ Q +R + Sbjct: 809 MVDEFQARKAPIFLLSLKAGGTGLNLT-AANHVIHFDRWWNPAVENQATDR-----AYRI 862 Query: 160 GFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 G + V V+ LI TI+E + + L K + D++ Sbjct: 863 GQTKFVHVHKLITTGTIEEKIDEMLEQKQALADVITEG 900 >gi|322805986|emb|CBZ03553.1| swf/SNF family helicase [Clostridium botulinum H04402 065] Length = 1077 Score = 128 bits (323), Expect = 3e-28, Method: Composition-based stats. Identities = 49/213 (23%), Positives = 86/213 (40%), Gaps = 27/213 (12%) Query: 2 KQYHKF----QRELYCDLQ--GENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEK 55 K Y F ++E Y +++ G N S + Q+ + E E + K Sbjct: 851 KVYASFAESAKKEFYKEIRERGFNKSKIKILSIITRLRQICCDPSTFIEN---YEGSNGK 907 Query: 56 IKALEVIIEKA--NAAPIIVAYHFNSDLARLQKAFP---------QGRTL-DKDPCTIQE 103 + L I+ + I++ F S L + + F G T D +++ Sbjct: 908 TETLLDIVNSSINAGHKILLFSQFTSVLKNIAEVFKANNIKYLYLDGSTKADVRGSLVKD 967 Query: 104 WNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKR 163 +N GK + + G GLNL +I++ F WW+ Q +R + G K+ Sbjct: 968 FNNGKGDIFLISLKAGGTGLNLT-SADIVIHFDPWWNPAVEDQASDR-----AHRIGQKK 1021 Query: 164 AVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 V V LIA+ TI+E + + + K I D +++ Sbjct: 1022 TVEVIRLIAKGTIEEKIYKIQQKKKEIIDKVID 1054 >gi|170760693|ref|YP_001787071.1| Snf2/Rad54 family helicase [Clostridium botulinum A3 str. Loch Maree] gi|169407682|gb|ACA56093.1| helicase, SNF2/RAD54 family [Clostridium botulinum A3 str. Loch Maree] Length = 1077 Score = 128 bits (323), Expect = 3e-28, Method: Composition-based stats. Identities = 48/213 (22%), Positives = 86/213 (40%), Gaps = 27/213 (12%) Query: 2 KQYHKF----QRELYCDLQ--GENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEK 55 K Y F ++E Y +++ G N S + Q+ + E E + K Sbjct: 851 KVYASFAESAKKEFYKEIRERGFNKSKIKILSIITRLRQICCDPSTFIEN---YEGSNGK 907 Query: 56 IKALEVIIEKA--NAAPIIVAYHFNSDLARLQKAFP---------QGRTL-DKDPCTIQE 103 + L I+ + I++ F S L + + F G T D +++ Sbjct: 908 TETLLDIVNSSINAGHKILLFSQFTSVLKNIAEVFKANNINYLYLDGSTKADVRGNLVKD 967 Query: 104 WNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKR 163 +N GK + + G GLNL +I++ F WW+ Q +R + G K+ Sbjct: 968 FNNGKGDIFLISLKAGGTGLNLT-SADIVIHFDPWWNPAVEDQASDR-----AHRIGQKK 1021 Query: 164 AVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 V + LIA+ TI+E + + + K I D +++ Sbjct: 1022 TVEIIRLIAKGTIEEKIYKIQQKKKEIIDKVID 1054 >gi|319946443|ref|ZP_08020680.1| Snf2 family protein [Streptococcus australis ATCC 700641] gi|319747411|gb|EFV99667.1| Snf2 family protein [Streptococcus australis ATCC 700641] Length = 1031 Score = 128 bits (323), Expect = 3e-28, Method: Composition-based stats. Identities = 36/215 (16%), Positives = 78/215 (36%), Gaps = 24/215 (11%) Query: 1 MKQYHKFQRELYCDLQGENIE--AFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKA 58 + Q + ++ E + S ++ Q+ + + E+ K+ + Sbjct: 810 LAQLKQM-QDRILSSSEEELNRSKIEILSGLMRLRQICDTPSLFLEDYT---GESGKLDS 865 Query: 59 LEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGR----------TLDKDPCTIQEWNE 106 L ++E+ +++ F L ++K R ++ +N Sbjct: 866 LRELLEQIKDGNQRVLIFSQFRGMLDIIEKELDALRMTSFKITGSTPANERQDMTNAFNS 925 Query: 107 GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVF 166 G+ + G GLNL G + ++ LWW+ Q I R + G + V Sbjct: 926 GQGDAFLISLKAGGVGLNLT-GADTVILVDLWWNPAVEDQAIGR-----AHRMGQDKNVE 979 Query: 167 VYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 VY +I + TI+E + + +K + +L+ + Sbjct: 980 VYRMITRGTIEEKIQELQTSKRHLVSTILDGTETR 1014 >gi|15618758|ref|NP_225044.1| SWI/SNF family helicase_2 [Chlamydophila pneumoniae CWL029] gi|16752190|ref|NP_445557.1| SNF2 family helicase [Chlamydophila pneumoniae AR39] gi|33242209|ref|NP_877150.1| swf/snf helicase [Chlamydophila pneumoniae TW-183] gi|4377165|gb|AAD18987.1| SWI/SNF family helicase_2 [Chlamydophila pneumoniae CWL029] gi|8163540|gb|AAF73724.1| helicase, Snf2 family [Chlamydophila pneumoniae AR39] gi|33236720|gb|AAP98807.1| swf/snf helicase [Chlamydophila pneumoniae TW-183] Length = 1166 Score = 128 bits (323), Expect = 3e-28, Method: Composition-based stats. Identities = 31/185 (16%), Positives = 70/185 (37%), Gaps = 18/185 (9%) Query: 24 NSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDL 81 + + + Q+ + + + K L ++ + +V + L Sbjct: 970 HVLATLTRLKQICCHPAIF-AKDAPEPGDSAKYDMLMDLLSSLVDSGHKTVVFSQYTKML 1028 Query: 82 ARLQK---------AFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNIL 132 ++K + G T ++ Q + + + + G GLNL G + + Sbjct: 1029 GIIKKDLESRGIPFVYLDGSTKNRLDLVNQFNEDPSLLVFLISLKAGGTGLNL-VGADTV 1087 Query: 133 VFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQD 192 + + +WW+ Q +R+ + G R+V Y L+ NTI+E +L K ++ Sbjct: 1088 IHYDMWWNPAVENQATDRV-----HRIGQSRSVSSYKLVTLNTIEEKILTLQNRKKSLVK 1142 Query: 193 LLLNA 197 ++N+ Sbjct: 1143 KVINS 1147 >gi|320547398|ref|ZP_08041686.1| Snf2 family protein [Streptococcus equinus ATCC 9812] gi|320447943|gb|EFW88698.1| Snf2 family protein [Streptococcus equinus ATCC 9812] Length = 1030 Score = 128 bits (323), Expect = 3e-28, Method: Composition-based stats. Identities = 42/212 (19%), Positives = 74/212 (34%), Gaps = 27/212 (12%) Query: 1 MKQYHKFQRELYCDLQGENIE--AFNSASKTVKCLQLA-NGAVYYDEEKHWKEVHDEKIK 57 + Q + +E +I S + Q+ A++ D + KI Sbjct: 811 LAQLRQM-QETITSASDADINRRKIEILSGITRLRQICDTPALFMDYDGE-----SGKID 864 Query: 58 ALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQ----------GRTLDKDPCTIQEWN 105 +L ++ + N ++ F L +K D + +N Sbjct: 865 SLRDLLTQIKENGHRALIFSQFRGMLDIAEKEIEDLGLTSYKITGSTPADARQEMTRAFN 924 Query: 106 EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 G + G GLNL G + ++ LWW+ Q I R + G K V Sbjct: 925 NGSKDTFLISLKAGGVGLNLT-GADTVILIDLWWNPAVEMQAISR-----AHRIGQKENV 978 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 VY LI + TI+E +L+ +K + +L+ Sbjct: 979 EVYRLITRGTIEEKILEMQESKKNLVTTVLDG 1010 >gi|15836382|ref|NP_300906.1| SWI/SNF family helicase_2 [Chlamydophila pneumoniae J138] gi|8979223|dbj|BAA99057.1| SWI/SNF family helicase_2 [Chlamydophila pneumoniae J138] Length = 1166 Score = 128 bits (323), Expect = 3e-28, Method: Composition-based stats. Identities = 31/185 (16%), Positives = 70/185 (37%), Gaps = 18/185 (9%) Query: 24 NSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDL 81 + + + Q+ + + + K L ++ + +V + L Sbjct: 970 HVLATLTRLKQICCHPAIF-AKDAPEPGDSAKYDMLMDLLSSLVDSGHKTVVFSQYTKML 1028 Query: 82 ARLQK---------AFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNIL 132 ++K + G T ++ Q + + + + G GLNL G + + Sbjct: 1029 GIIKKDLESRGIPFVYLDGSTKNRLDLVNQFNEDPSLLVFLISLKAGGTGLNL-VGADTV 1087 Query: 133 VFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQD 192 + + +WW+ Q +R+ + G R+V Y L+ NTI+E +L K ++ Sbjct: 1088 IHYDMWWNPAVENQATDRV-----HRIGQSRSVSSYKLVTLNTIEEKILTLQNRKKSLVK 1142 Query: 193 LLLNA 197 ++N+ Sbjct: 1143 KVINS 1147 >gi|219668528|ref|YP_002458963.1| non-specific serine/threonine protein kinase [Desulfitobacterium hafniense DCB-2] gi|219538788|gb|ACL20527.1| Non-specific serine/threonine protein kinase [Desulfitobacterium hafniense DCB-2] Length = 1082 Score = 128 bits (323), Expect = 3e-28, Method: Composition-based stats. Identities = 34/183 (18%), Positives = 66/183 (36%), Gaps = 21/183 (11%) Query: 26 ASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLAR 83 + + Q+ + + + K+ + ++E A ++V F S L Sbjct: 888 LAALTRLRQICSHPGMFIDNYT---GESGKMLLFQELLEDSLAGGHRVLVFSQFTSMLDI 944 Query: 84 L---------QKAFPQGRTLD-KDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILV 133 + + G T + +N G+ + + G GLNL G + ++ Sbjct: 945 IGEYLHSENIDYFYLSGSTKALERSRMAASFNNGEGQVFLISLKAGGTGLNLT-GADTVI 1003 Query: 134 FFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDL 193 F WW+ Q +R + G + +V V L+ Q TI+E V K + D Sbjct: 1004 HFDPWWNPAVEDQATDR-----AHRIGQQNSVQVIKLLTQGTIEEKVNALQAKKKKLIDS 1058 Query: 194 LLN 196 ++ Sbjct: 1059 VIQ 1061 >gi|148379627|ref|YP_001254168.1| helicase, SNF2/RAD54 family [Clostridium botulinum A str. ATCC 3502] gi|153931482|ref|YP_001384006.1| Snf2/Rad54 family helicase [Clostridium botulinum A str. ATCC 19397] gi|153936716|ref|YP_001387549.1| Snf2/Rad54 family helicase [Clostridium botulinum A str. Hall] gi|226948994|ref|YP_002804085.1| helicase, SNF2/RAD54 family [Clostridium botulinum A2 str. Kyoto] gi|148289111|emb|CAL83205.1| putative helicase [Clostridium botulinum A str. ATCC 3502] gi|152927526|gb|ABS33026.1| helicase, SNF2/RAD54 family [Clostridium botulinum A str. ATCC 19397] gi|152932630|gb|ABS38129.1| helicase, SNF2/RAD54 family [Clostridium botulinum A str. Hall] gi|226841046|gb|ACO83712.1| helicase, SNF2/RAD54 family [Clostridium botulinum A2 str. Kyoto] Length = 1077 Score = 128 bits (323), Expect = 3e-28, Method: Composition-based stats. Identities = 49/213 (23%), Positives = 86/213 (40%), Gaps = 27/213 (12%) Query: 2 KQYHKF----QRELYCDLQ--GENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEK 55 K Y F ++E Y +++ G N S + Q+ + E E + K Sbjct: 851 KVYASFAESAKKEFYKEIRERGFNKSKIKILSIITRLRQICCDPSTFIEN---YEGSNGK 907 Query: 56 IKALEVIIEKA--NAAPIIVAYHFNSDLARLQKAFP---------QGRTL-DKDPCTIQE 103 + L I+ + I++ F S L + + F G T D +++ Sbjct: 908 TETLLDIVNSSINAGHKILLFSQFTSVLKNIAEVFKANNINYLYLDGSTKADVRGSLVKD 967 Query: 104 WNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKR 163 +N GK + + G GLNL +I++ F WW+ Q +R + G K+ Sbjct: 968 FNNGKGDIFLISLKAGGTGLNLT-SADIVIHFDPWWNPAVEDQASDR-----AHRIGQKK 1021 Query: 164 AVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 V V LIA+ TI+E + + + K I D +++ Sbjct: 1022 TVEVIRLIAKGTIEEKIYKIQQKKKEIIDKVID 1054 >gi|138896831|ref|YP_001127284.1| helicase [Geobacillus thermodenitrificans NG80-2] gi|134268344|gb|ABO68539.1| Helicase, putative [Geobacillus thermodenitrificans NG80-2] Length = 926 Score = 128 bits (323), Expect = 3e-28, Method: Composition-based stats. Identities = 42/218 (19%), Positives = 78/218 (35%), Gaps = 33/218 (15%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANG--------AVYYDEEKHWKEVH- 52 Y + + E +A + ++ LQ+ NG A+Y E + V Sbjct: 694 ALYEQLVNDTL-----ERAKAASPFARRGLILQMLNGIKQICNHPALYLKERSPRQLVER 748 Query: 53 DEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQ-----------GRTLDKDPC 99 K++ L ++E+ AN ++ + +Q+ Sbjct: 749 SHKLEKLVELVEQIRANDESCLIFTQYVRMGEMIQELLSDLFDEPVLFLNGSVPKPTRDR 808 Query: 100 TIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQA 159 + E+ K P+ + G GLNL N ++ F WW+ Q +R + Sbjct: 809 MVDEFQARKAPIFLLSLKAGGTGLNLT-AANHVIHFDRWWNPAVENQATDR-----AYRI 862 Query: 160 GFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 G + V V+ LI TI+E + + L K + D++ Sbjct: 863 GQTKFVHVHKLITTGTIEEKIDEMLEQKQALADVITEG 900 >gi|300771567|ref|ZP_07081442.1| Snf2 family protein [Sphingobacterium spiritivorum ATCC 33861] gi|300761556|gb|EFK58377.1| Snf2 family protein [Sphingobacterium spiritivorum ATCC 33861] Length = 960 Score = 128 bits (323), Expect = 3e-28, Method: Composition-based stats. Identities = 42/209 (20%), Positives = 77/209 (36%), Gaps = 26/209 (12%) Query: 4 YHKFQ---RELYCDLQGENIEAFNSASKT---VKCLQLANGAVYYDEEKHWKEVHDEKIK 57 Y K + R ++ E+ + + K QLAN D++ E + K Sbjct: 741 YEKVKSEYRNALLNVNTEDKAKTSQITLLQGLTKLRQLANHPKMIDDD---FEGNSGKFD 797 Query: 58 ALEVIIEK--ANAAPIIVAYHFNSDLAR---------LQKAFPQGRTLDKDPCTIQEWNE 106 + +E +++ F L+ +Q A+ G T ++ + Sbjct: 798 LVLETLESVLHVGNKVLIFSQFVKQLSIFRTYFEEKGIQYAYLDGATKNRSEAVAEFQKN 857 Query: 107 GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVF 166 L + G GLNL + + WW+ QQ ++R + G R+VF Sbjct: 858 KNTKLFLISIKAGGVGLNLIEADYVFIL-DPWWNPAVEQQAVDR-----SHRIGQTRSVF 911 Query: 167 VYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 +Y I ++T++E +L K I L+ Sbjct: 912 IYKFITKDTVEEKILAMQNRKRGIAKSLI 940 >gi|227535766|ref|ZP_03965815.1| SNF2 family superfamily II DNA/RNA helicase [Sphingobacterium spiritivorum ATCC 33300] gi|227244254|gb|EEI94269.1| SNF2 family superfamily II DNA/RNA helicase [Sphingobacterium spiritivorum ATCC 33300] Length = 960 Score = 128 bits (323), Expect = 3e-28, Method: Composition-based stats. Identities = 42/209 (20%), Positives = 77/209 (36%), Gaps = 26/209 (12%) Query: 4 YHKFQ---RELYCDLQGENIEAFNSASKT---VKCLQLANGAVYYDEEKHWKEVHDEKIK 57 Y K + R ++ E+ + + K QLAN D++ E + K Sbjct: 741 YEKVKSEYRNALLNVNTEDKAKTSQITLLQGLTKLRQLANHPKMIDDD---FEGNSGKFD 797 Query: 58 ALEVIIEK--ANAAPIIVAYHFNSDLAR---------LQKAFPQGRTLDKDPCTIQEWNE 106 + +E +++ F L+ +Q A+ G T ++ + Sbjct: 798 LVLETLESVLHVGNKVLIFSQFVKQLSIFRTYFEEKGIQYAYLDGATKNRSEAVAEFQKN 857 Query: 107 GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVF 166 L + G GLNL + + WW+ QQ ++R + G R+VF Sbjct: 858 KNTKLFLISIKAGGVGLNLIEADYVFIL-DPWWNPAVEQQAVDR-----SHRIGQTRSVF 911 Query: 167 VYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 +Y I ++T++E +L K I L+ Sbjct: 912 IYKFITKDTVEEKILAMQNRKRGIAKSLI 940 >gi|171780271|ref|ZP_02921175.1| hypothetical protein STRINF_02059 [Streptococcus infantarius subsp. infantarius ATCC BAA-102] gi|171281619|gb|EDT47054.1| hypothetical protein STRINF_02059 [Streptococcus infantarius subsp. infantarius ATCC BAA-102] Length = 1027 Score = 128 bits (323), Expect = 4e-28, Method: Composition-based stats. Identities = 38/211 (18%), Positives = 74/211 (35%), Gaps = 25/211 (11%) Query: 1 MKQYHKFQRELYCDLQGENIE--AFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKA 58 + Q + +E +I S + Q+ + + + + K+ + Sbjct: 808 LAQLRQM-QETIAGASDADINRRKIEILSGITRLRQICDTPALFMD----YQGESGKLDS 862 Query: 59 LEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQ----------GRTLDKDPCTIQEWNE 106 L ++ + N ++ F L +K + + + +N Sbjct: 863 LRDLLTQIKENGHRALIFSQFRGMLDIAEKEIEEIGLTSYKITGSTPANARQEMTRAFNN 922 Query: 107 GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVF 166 G + G GLNL G + ++ LWW+ Q I R + G K V Sbjct: 923 GSKDTFLISLKAGGVGLNLT-GADTVILIDLWWNPAVEMQAISR-----AHRIGQKENVE 976 Query: 167 VYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 VY LI + TI+E +L+ +K + +L+ Sbjct: 977 VYRLITRGTIEEKILEMQESKKNLVTTVLDG 1007 >gi|330443927|ref|YP_004376913.1| helicase, swi/snf2 family [Chlamydophila pecorum E58] gi|328807037|gb|AEB41210.1| helicase, swi/snf2 family [Chlamydophila pecorum E58] Length = 1167 Score = 128 bits (323), Expect = 4e-28, Method: Composition-based stats. Identities = 30/183 (16%), Positives = 70/183 (38%), Gaps = 18/183 (9%) Query: 26 ASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLAR 83 + + Q+ + + + K L ++ + +V + L+ Sbjct: 973 LATLTRLKQICCHPAIF-AKDSPEPGDSAKYDMLMDLLSSLVDSGHKTVVFSQYTKMLSI 1031 Query: 84 LQK---------AFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVF 134 ++K + G T ++ + + + + + G GLNL G + ++ Sbjct: 1032 MKKDLEIRGVPFVYLDGSTKNRLELVNKFNEDPNLLVFLVSLKAGGTGLNL-VGADTVIH 1090 Query: 135 FSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 + +WW+ Q +R+ + G R+V Y L+ NTI+E +L K ++ + Sbjct: 1091 YDMWWNPAVENQATDRV-----HRIGQSRSVSSYKLVTLNTIEEKILTLQNRKKSLVKKV 1145 Query: 195 LNA 197 +N+ Sbjct: 1146 INS 1148 >gi|282891309|ref|ZP_06299811.1| hypothetical protein pah_c050o088 [Parachlamydia acanthamoebae str. Hall's coccus] gi|281498806|gb|EFB41123.1| hypothetical protein pah_c050o088 [Parachlamydia acanthamoebae str. Hall's coccus] Length = 1166 Score = 128 bits (323), Expect = 4e-28, Method: Composition-based stats. Identities = 39/202 (19%), Positives = 81/202 (40%), Gaps = 23/202 (11%) Query: 2 KQYHKFQRELYCDL---QGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKA 58 + Y + RE L +G + + + + Q+ + +EK + K Sbjct: 945 RSYAQSAREELSQLVSKEGFDKVQIHVLATLTRLKQICCHPAIFAKEK-PEGGDSSKYDM 1003 Query: 59 LEVIIEKA--NAAPIIVAYHFNSDLARLQK---------AFPQGRTLDKDPCTIQEWNEG 107 L +I ++ + L ++ + G + ++ ++++NE Sbjct: 1004 LMELIPTLIEGKHKTVIFSQYTRMLNIIRDDLSSQGIPFEYLDGSSKNR-LNIVKKFNED 1062 Query: 108 K-IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVF 166 + IP+ + G GLNL G + ++ + +WW+ Q +R+ + G K++V Sbjct: 1063 ENIPIFLVSLKAGGTGLNL-IGADTVIHYDMWWNPAVENQATDRV-----HRLGQKKSVL 1116 Query: 167 VYYLIAQNTIDELVLQRLRTKS 188 Y LI TI+E +LQ + K Sbjct: 1117 SYKLITLGTIEEKILQLQQQKE 1138 >gi|170755378|ref|YP_001781299.1| Snf2/Rad54 family helicase [Clostridium botulinum B1 str. Okra] gi|169120590|gb|ACA44426.1| helicase, SNF2/RAD54 family [Clostridium botulinum B1 str. Okra] Length = 1077 Score = 128 bits (323), Expect = 4e-28, Method: Composition-based stats. Identities = 49/213 (23%), Positives = 86/213 (40%), Gaps = 27/213 (12%) Query: 2 KQYHKF----QRELYCDLQ--GENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEK 55 K Y F ++E Y +++ G N S + Q+ + E E + K Sbjct: 851 KVYASFAESAKKEFYKEIRERGFNKSKIKILSIITRLRQICCDPSTFIEN---YEGSNGK 907 Query: 56 IKALEVIIEKA--NAAPIIVAYHFNSDLARLQKAFP---------QGRTL-DKDPCTIQE 103 + L I+ + I++ F S L + + F G T D +++ Sbjct: 908 TETLLDIVNSSINAGHKILLFSQFTSVLKNIAEVFKANNINYLYLDGSTKADVRGSLVKD 967 Query: 104 WNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKR 163 +N GK + + G GLNL +I++ F WW+ Q +R + G K+ Sbjct: 968 FNNGKGDIFLISLKAGGTGLNLT-SADIVIHFDPWWNPAVEDQASDR-----AHRIGQKK 1021 Query: 164 AVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 V V LIA+ TI+E + + + K I D +++ Sbjct: 1022 TVEVIRLIAKGTIEEKIYKIQQKKKEIIDKVID 1054 >gi|330829013|ref|YP_004391965.1| SWI/SNF family helicase [Aeromonas veronii B565] gi|328804149|gb|AEB49348.1| SWI/SNF family helicase [Aeromonas veronii B565] Length = 1291 Score = 128 bits (323), Expect = 4e-28, Method: Composition-based stats. Identities = 41/209 (19%), Positives = 79/209 (37%), Gaps = 22/209 (10%) Query: 2 KQYHKFQRELYCDLQGENIEAF-NSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 + Y +RE+ +Q + A + S + +L E W + K+ Sbjct: 1074 QLYEATRREVVQQVQSADGRALMHVLSGLTRLRRLCCSPELVMPE--WSQTSS-KLDEAM 1130 Query: 61 VIIEKA--NAAPIIVAYHFNSDLARLQKAFPQ----------GRTLDKDPCTIQEWNEGK 108 ++E+A ++V F L+ L+ Q G + +I + + Sbjct: 1131 ALLEEAIDGGHRVLVFSQFVDLLSLLRARIEQKSWDYCYLDGGCSAKSRQDSILRFRHEE 1190 Query: 109 IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVY 168 +PL + G GLNL + ++ WW+ Q +R + G + V VY Sbjct: 1191 VPLFLISLKAGGTGLNLTQ-ADTVLHLDPWWNPAVEDQASDR-----AHRMGQTQPVTVY 1244 Query: 169 YLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 L+ + T++E ++ K + D LL+ Sbjct: 1245 RLVCEQTVEEKIVALHDEKRALADGLLSG 1273 >gi|297583264|ref|YP_003699044.1| SNF2-like protein [Bacillus selenitireducens MLS10] gi|297141721|gb|ADH98478.1| SNF2-related protein [Bacillus selenitireducens MLS10] Length = 1102 Score = 128 bits (323), Expect = 4e-28, Method: Composition-based stats. Identities = 38/183 (20%), Positives = 79/183 (43%), Gaps = 21/183 (11%) Query: 26 ASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLAR 83 + + QL + E+ + K+ L+ ++ A N +++ F+S L Sbjct: 909 LAGLTRLRQLCCHPSLFIED---YKGESGKLNDLKELVANAVENGRRLLIFSQFSSMLTM 965 Query: 84 LQKAFPQ---------GRTLDKDPCTI-QEWNEGKIPLLFAHPASCGHGLNLQYGGNILV 133 ++ + G+T KD + + +N+G+ L + G GLNL G +++V Sbjct: 966 MKDVLEEEGYSLFYLDGQTPGKDRVDMAERFNQGEKELFLISLKAGGTGLNL-PGADLVV 1024 Query: 134 FFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDL 193 + LWW+ +Q R + G K+ V V ++++ TI+E + + K + D Sbjct: 1025 LYDLWWNPAVEEQAAGR-----AHRMGQKKVVQVIRMVSEGTIEEKIHALQQRKRELIDT 1079 Query: 194 LLN 196 ++ Sbjct: 1080 VIQ 1082 >gi|15834706|ref|NP_296465.1| SNF2 family helicase [Chlamydia muridarum Nigg] gi|8163131|gb|AAF73530.1| helicase, Snf2 family [Chlamydia muridarum Nigg] Length = 1181 Score = 128 bits (322), Expect = 4e-28, Method: Composition-based stats. Identities = 30/185 (16%), Positives = 69/185 (37%), Gaps = 18/185 (9%) Query: 24 NSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDL 81 + + + Q+ + + + K L ++ + +V + L Sbjct: 985 HVLATLTRLKQICCHPAIF-AKDTPEPGDSAKYDMLMDLLGSLVDSGHKTVVFSQYTKML 1043 Query: 82 ARLQK---------AFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNIL 132 +++ + G T ++ Q + + + + G GLNL G + + Sbjct: 1044 GIIKQDLEAKGVPFVYLDGSTKNRLEIVQQFNEDPSLLVFLVSLKAGGTGLNL-VGADTV 1102 Query: 133 VFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQD 192 + + +WW+ Q +R+ + G R+V Y L+ NTI+E +L K + Sbjct: 1103 IHYDMWWNPAVENQATDRV-----HRIGQSRSVSSYKLVTLNTIEEKILSLQNRKKGLVK 1157 Query: 193 LLLNA 197 ++N+ Sbjct: 1158 KVINS 1162 >gi|153939497|ref|YP_001391002.1| Snf2/Rad54 family helicase [Clostridium botulinum F str. Langeland] gi|152935393|gb|ABS40891.1| helicase, SNF2/RAD54 family [Clostridium botulinum F str. Langeland] Length = 1077 Score = 128 bits (322), Expect = 4e-28, Method: Composition-based stats. Identities = 49/213 (23%), Positives = 86/213 (40%), Gaps = 27/213 (12%) Query: 2 KQYHKF----QRELYCDLQ--GENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEK 55 K Y F ++E Y +++ G N S + Q+ + E E + K Sbjct: 851 KVYASFAESAKKEFYKEIRERGFNKSKIKILSIITRLRQICCDPSTFIEN---YEGSNGK 907 Query: 56 IKALEVIIEKA--NAAPIIVAYHFNSDLARLQKAFP---------QGRTL-DKDPCTIQE 103 + L I+ + I++ F S L + + F G T D +++ Sbjct: 908 TETLLDIVNSSINAGHKILLFSQFTSVLKNIAEVFKANNINYLYLDGSTKADVRGSLVKD 967 Query: 104 WNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKR 163 +N GK + + G GLNL +I++ F WW+ Q +R + G K+ Sbjct: 968 FNNGKGDIFLISLKAGGTGLNLT-SADIVIHFDPWWNPAVEDQASDR-----AHRIGQKK 1021 Query: 164 AVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 V V LIA+ TI+E + + + K I D +++ Sbjct: 1022 TVEVIRLIAKGTIEEKIYKIQQKKKEIIDKVID 1054 >gi|319650819|ref|ZP_08004956.1| hypothetical protein HMPREF1013_01562 [Bacillus sp. 2_A_57_CT2] gi|317397417|gb|EFV78118.1| hypothetical protein HMPREF1013_01562 [Bacillus sp. 2_A_57_CT2] Length = 939 Score = 128 bits (322), Expect = 4e-28, Method: Composition-based stats. Identities = 35/212 (16%), Positives = 77/212 (36%), Gaps = 23/212 (10%) Query: 3 QYHKFQRELYCDLQG--ENIEAFNSASKTVKCLQLANG-AVYYDEEKHWKEVH-DEKIKA 58 Y + ++ + ++ + QL N A+Y EEK + K++ Sbjct: 715 LYEQLVQDTFAQIEKLSGFERKGLILQLLSRLKQLCNHPALYLKEEKPKHVLERSVKLEK 774 Query: 59 LEVIIEKAN--AAPIIVAYHFNSDLARLQKAFPQ-----------GRTLDKDPCTIQEWN 105 L ++ + ++ + + + + + I + Sbjct: 775 LSELVSAVHEQGESCLIFTQYIEMGNMIARLLKKQFGFDVPFLNGSVPKQERDNMISRFQ 834 Query: 106 EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 + + P+ + G GLNL N ++ + WW+ Q +R + G KR V Sbjct: 835 DHEFPVFLLSLKAGGTGLNLT-AANHVIHYDRWWNPAVENQATDR-----AYRIGQKRFV 888 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 V+ +IA T++E + L K ++ D ++ + Sbjct: 889 HVHKMIATGTLEEKIDAMLEKKQSLNDQIITS 920 >gi|310822580|ref|YP_003954938.1| snf2/helicase domain-containing protein [Stigmatella aurantiaca DW4/3-1] gi|309395652|gb|ADO73111.1| SNF2/helicase domain protein [Stigmatella aurantiaca DW4/3-1] Length = 1282 Score = 128 bits (322), Expect = 4e-28, Method: Composition-based stats. Identities = 34/143 (23%), Positives = 56/143 (39%), Gaps = 16/143 (11%) Query: 65 KANAAPIIVAYHFNSDLARLQKAFPQGR----------TLDKDPCTIQEWNEGKIPLLFA 114 K+ ++V F S L +++ +G L IQ + EGK + Sbjct: 1108 KSEGHRVLVFSQFTSHLELVREEVERGGFTYQYLDGSTPLGARAKRIQAFQEGKGDVFLI 1167 Query: 115 HPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQN 174 + G G+NL + ++ WW+ Q +R + G R V VY LIA+ Sbjct: 1168 SLKAGGTGINLT-AADYVIHLDPWWNPAVEDQATDR-----AHRIGQTRPVTVYRLIARG 1221 Query: 175 TIDELVLQRLRTKSTIQDLLLNA 197 TI+E +L K + +L Sbjct: 1222 TIEEQILSLHSDKRALVAGVLEG 1244 >gi|300855333|ref|YP_003780317.1| putative SNF2 family helicase [Clostridium ljungdahlii DSM 13528] gi|300435448|gb|ADK15215.1| predicted SNF2 family helicase [Clostridium ljungdahlii DSM 13528] Length = 1080 Score = 128 bits (322), Expect = 4e-28, Method: Composition-based stats. Identities = 39/183 (21%), Positives = 72/183 (39%), Gaps = 21/183 (11%) Query: 26 ASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLAR 83 S K QL + K+ AL ++ K A I+V F S L Sbjct: 883 LSYITKLRQLCLDPSILINN---YSGGNGKMDALVELLHKSIAQGHRILVFSQFTSVLKN 939 Query: 84 LQKAFPQGRT----------LDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILV 133 + + + L++ ++++N+GK + + G GLNL ++++ Sbjct: 940 IGEKISGEKIPFSYLDGTIKLEERINIVKKFNKGKNSVFLISLKAGGTGLNLT-SADVVI 998 Query: 134 FFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDL 193 F WW+ +Q +R + G K V V +IA+ TI+E ++ K + + Sbjct: 999 HFDPWWNTAVEEQAADR-----THRIGQKNVVEVIKIIAKGTIEEKIVLLQNEKKKLIEK 1053 Query: 194 LLN 196 L+ Sbjct: 1054 LME 1056 >gi|221124460|ref|XP_002165434.1| PREDICTED: similar to TATA-binding protein-associated factor 172 [Hydra magnipapillata] Length = 562 Score = 128 bits (322), Expect = 4e-28, Method: Composition-based stats. Identities = 34/184 (18%), Positives = 67/184 (36%), Gaps = 18/184 (9%) Query: 24 NSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDL 81 + +K Q+ ++ K+ AL ++ ++V F L Sbjct: 336 SILDALLKLRQVCCDPYLVKGSDIAPDMERAKLHALTDLLVPLVDEGRRVLVFSQFTELL 395 Query: 82 ARLQKAFPQGRTL----------DKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNI 131 + A R + +Q + ++P+L + G GLNL + Sbjct: 396 ELIADALSALRLPFLSLTGNTCPAQRGDIVQRFQNQEVPVLLVSLKTGGVGLNLT-AADT 454 Query: 132 LVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQ 191 ++ WW+ +Q R + G + VFVY L+ + +I+E +L+ K + Sbjct: 455 VIHMDPWWNPAVEEQATAR-----AHRIGQDQPVFVYKLVVEGSIEERMLELQARKLALS 509 Query: 192 DLLL 195 D +L Sbjct: 510 DSVL 513 >gi|309791592|ref|ZP_07686086.1| non-specific serine/threonine protein kinase [Oscillochloris trichoides DG6] gi|308226372|gb|EFO80106.1| non-specific serine/threonine protein kinase [Oscillochloris trichoides DG6] Length = 1064 Score = 128 bits (322), Expect = 4e-28, Method: Composition-based stats. Identities = 37/178 (20%), Positives = 66/178 (37%), Gaps = 20/178 (11%) Query: 29 TVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQK 86 ++ Q+ N DE+ K + L +E +A ++ F L +++ Sbjct: 876 LLRLRQICNHPRLMDEK---FRGTSGKFELLLETLETLQAEGHKALIFSQFVQMLTIIRE 932 Query: 87 AFP---------QGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSL 137 A G T + N+ +P + G GLNL + ++ Sbjct: 933 ALDARKIPYAYLDGSTRKRQEVVDTFQNDPDLPFFLISLKAGGVGLNLT-AADYVIHVDP 991 Query: 138 WWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 WW+ Q +R + G R VFVY LI + T++E +L K + + L+ Sbjct: 992 WWNPAIEMQATDR-----THRIGQTRPVFVYKLITRETVEEKILLLQEQKRALVEQLI 1044 >gi|146297575|ref|YP_001181346.1| helicase domain-containing protein [Caldicellulosiruptor saccharolyticus DSM 8903] gi|145411151|gb|ABP68155.1| helicase domain protein [Caldicellulosiruptor saccharolyticus DSM 8903] Length = 177 Score = 128 bits (322), Expect = 5e-28, Method: Composition-based stats. Identities = 34/162 (20%), Positives = 74/162 (45%), Gaps = 18/162 (11%) Query: 50 EVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQ---------GRTLDKDP 98 E K++ E I+E + ++V + L L++ + G T ++ Sbjct: 5 EGSSGKLELFEEILEDVLESNHRVVVFSQWVEMLKILEERIKERGFEYFYLNGSTKSEER 64 Query: 99 CT-IQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 + +N G+ + + G GLNL G ++++ + LWW+ Q ++R Sbjct: 65 IDMVNRFNGGEKQVFLVSLKAGGFGLNLT-GADVVILYDLWWNPAVENQAMDR-----AH 118 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 + G + +V V+ LI +NTI+E + + + K + D ++++ + Sbjct: 119 RIGQENSVQVFRLITKNTIEERIFELQQKKKDLFDQVVSSAQ 160 >gi|218282742|ref|ZP_03488939.1| hypothetical protein EUBIFOR_01525 [Eubacterium biforme DSM 3989] gi|218216387|gb|EEC89925.1| hypothetical protein EUBIFOR_01525 [Eubacterium biforme DSM 3989] Length = 1054 Score = 128 bits (322), Expect = 5e-28, Method: Composition-based stats. Identities = 34/190 (17%), Positives = 66/190 (34%), Gaps = 21/190 (11%) Query: 19 NIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIE--KANAAPIIVAYH 76 +++ + + Q+ E + K +IE K N +++ Sbjct: 853 KVDSILILAMMTRLRQICCEPRMLYEN---YKGESTKFSMCLDLIETLKENGKKVLLFSS 909 Query: 77 FNS---------DLARLQKAFPQGRT-LDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQ 126 F S D ++ G K + + + + G GLNL Sbjct: 910 FTSIFDDFIEEFDRRGIKYHMITGAVDKKKRKEEVDAFQNDDSNVFLISLKAGGTGLNLT 969 Query: 127 YGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRT 186 ++ F WW++ Q +R + G + V VY L+ +NTI+E + + + Sbjct: 970 K-AQAVIHFDPWWNVSAQNQATDR-----AYRIGQTKNVLVYQLLMKNTIEEKIYEMQKR 1023 Query: 187 KSTIQDLLLN 196 K + DL + Sbjct: 1024 KKEMSDLFVE 1033 >gi|254443940|ref|ZP_05057416.1| SNF2 family N-terminal domain protein [Verrucomicrobiae bacterium DG1235] gi|198258248|gb|EDY82556.1| SNF2 family N-terminal domain protein [Verrucomicrobiae bacterium DG1235] Length = 1069 Score = 128 bits (322), Expect = 5e-28, Method: Composition-based stats. Identities = 34/204 (16%), Positives = 81/204 (39%), Gaps = 22/204 (10%) Query: 6 KFQRELYCDLQGENIEA---FNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVI 62 K ++ + ++ A FN + ++ Q+ E + +V K++ L + Sbjct: 854 KLTQQKVLGIDSQSAFAKERFNILASLLRLRQICCHPALISPE--YAKVRSAKLEGLVDL 911 Query: 63 IEKA--NAAPIIVAYHFNSDLARLQKAFP---------QGRTLDKDPCTIQEWNEGKIPL 111 + + +++ F L + ++ G+T +++ Q N+ + Sbjct: 912 VSELQEEGHKVLIFSQFVEMLKIISESLKGIDCKHLTLTGQTKNREELVDQFQNDETVTA 971 Query: 112 LFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLI 171 + G GLNL + +V + WW+ Q I+R + G K V Y LI Sbjct: 972 FLLSLRAAGSGLNLT-AASYVVLYDPWWNPAVEAQAIDR-----THRIGQKNTVNAYRLI 1025 Query: 172 AQNTIDELVLQRLRTKSTIQDLLL 195 A++++++ + K ++ + ++ Sbjct: 1026 AKDSVEQKIQSLQVKKESLANEIV 1049 >gi|15806278|ref|NP_294983.1| SNF2/RAD54 family DNA helicase [Deinococcus radiodurans R1] gi|6459005|gb|AAF10831.1|AE001973_4 DNA helicase, SNF2/RAD54 family [Deinococcus radiodurans R1] Length = 600 Score = 128 bits (322), Expect = 5e-28, Method: Composition-based stats. Identities = 35/180 (19%), Positives = 70/180 (38%), Gaps = 18/180 (10%) Query: 29 TVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQK 86 +K Q E + + K+ LE + + +++ F + L L++ Sbjct: 397 LLKLRQAVTDPRLVKLEAAREVQGNAKLDWLETNLPQMVEEGRRVLIFSGFATLLGHLEE 456 Query: 87 AFPQ---------GRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSL 137 + G+T D+ I + G+ + + G GLNL + ++ + Sbjct: 457 FLKREGIPYSKITGQTKDRQKQ-IDAFQAGETHVFLITLKAGGVGLNLT-AADTVIHYDP 514 Query: 138 WWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 WW+ Q +R + G + VFVY LIA +++E +L K+ + +L+ Sbjct: 515 WWNPAAEDQATDR-----AYRIGQDKPVFVYKLIAAGSVEERILDLQARKAALARGVLDG 569 >gi|171912733|ref|ZP_02928203.1| hypothetical protein VspiD_16175 [Verrucomicrobium spinosum DSM 4136] Length = 803 Score = 128 bits (322), Expect = 5e-28, Method: Composition-based stats. Identities = 35/181 (19%), Positives = 68/181 (37%), Gaps = 17/181 (9%) Query: 27 SKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLA-- 82 + ++ Q+ N H+K K LE ++++ ++ F L Sbjct: 608 TVLLRLRQVCNDLRLLKLGDHFKGQPGGKWPMLEELLQEIIDGGGKALIFSQFVGMLRLV 667 Query: 83 -------RLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFF 135 + ++ G T D+ ++ + L + G+GLNL + ++ Sbjct: 668 RDKVQSLEIAHSYLDGGTQDRGGQVSAFQSDPERKLFLISLKAGGYGLNLT-AADHVLLV 726 Query: 136 SLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 WW+ Q I+R + G R V Y L + T++E +L+ K +I D+ L Sbjct: 727 DPWWNPAVEAQAIDR-----AHRIGQGRPVTAYRLATRGTVEEKILKLQEKKRSIMDMTL 781 Query: 196 N 196 Sbjct: 782 E 782 >gi|327439414|dbj|BAK15779.1| superfamily II DNA/RNA helicase, SNF2 family [Solibacillus silvestris StLB046] Length = 1061 Score = 128 bits (322), Expect = 5e-28, Method: Composition-based stats. Identities = 35/184 (19%), Positives = 74/184 (40%), Gaps = 21/184 (11%) Query: 26 ASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKAN--AAPIIVAYHFNSDLAR 83 + + Q+ + E + K + L ++E++ +++ F L Sbjct: 868 LAGITRLRQICCHPALFVEG---YKGSSAKFEQLFRLLEQSKVSGRRVLIFSQFTQMLKM 924 Query: 84 L---------QKAFPQGRTLDKDPCTI-QEWNEGKIPLLFAHPASCGHGLNLQYGGNILV 133 + Q + G+T ++ + +N+G+ + + G GLNL G + ++ Sbjct: 925 IATELSKRGEQYFYLDGQTPSEERIALCNSFNDGERDMFLISLKAGGTGLNLT-GADTVI 983 Query: 134 FFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDL 193 + LWW+ +Q +R + G K V V LIA TI+E + + + K + Sbjct: 984 LYDLWWNPAVEEQAADR-----AHRMGQKEVVQVIKLIANGTIEEKMSELQQKKKMLISD 1038 Query: 194 LLNA 197 +L+ Sbjct: 1039 ILDG 1042 >gi|297531489|ref|YP_003672764.1| SNF2-related protein [Geobacillus sp. C56-T3] gi|297254741|gb|ADI28187.1| SNF2-related protein [Geobacillus sp. C56-T3] Length = 924 Score = 128 bits (321), Expect = 5e-28, Method: Composition-based stats. Identities = 42/215 (19%), Positives = 78/215 (36%), Gaps = 33/215 (15%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANG--------AVYYDEEKHWKEVH- 52 Y + + E + + ++ LQ+ NG A+Y E + + V Sbjct: 692 ALYEQLVNDTL-----ERAKEASPFARRGLILQMLNGVKQICDHPALYLKERRPRQLVER 746 Query: 53 DEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQ-----------GRTLDKDPC 99 K++ L +IE+ N ++ + +Q+ G Sbjct: 747 SHKLEKLIELIEQIRTNDESCLIFTQYVRMGEMIQELLSDLFDERVLFLHGGVPKQTRDR 806 Query: 100 TIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQA 159 + E+ K P+ + G GLNL N ++ F WW+ Q +R + Sbjct: 807 MVDEFQAKKAPIFLLSLKAGGTGLNLT-AANHVIHFDRWWNPAVENQATDR-----AYRI 860 Query: 160 GFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 G + V V+ LI TI+E + + L K + D++ Sbjct: 861 GQTKFVHVHKLITIGTIEEKIDEMLEQKQALADII 895 >gi|270284872|ref|ZP_06194266.1| SNF2 family helicase [Chlamydia muridarum Nigg] gi|270288900|ref|ZP_06195202.1| SNF2 family helicase [Chlamydia muridarum Weiss] Length = 1163 Score = 128 bits (321), Expect = 5e-28, Method: Composition-based stats. Identities = 30/185 (16%), Positives = 69/185 (37%), Gaps = 18/185 (9%) Query: 24 NSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDL 81 + + + Q+ + + + K L ++ + +V + L Sbjct: 967 HVLATLTRLKQICCHPAIF-AKDTPEPGDSAKYDMLMDLLGSLVDSGHKTVVFSQYTKML 1025 Query: 82 ARLQK---------AFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNIL 132 +++ + G T ++ Q + + + + G GLNL G + + Sbjct: 1026 GIIKQDLEAKGVPFVYLDGSTKNRLEIVQQFNEDPSLLVFLVSLKAGGTGLNL-VGADTV 1084 Query: 133 VFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQD 192 + + +WW+ Q +R+ + G R+V Y L+ NTI+E +L K + Sbjct: 1085 IHYDMWWNPAVENQATDRV-----HRIGQSRSVSSYKLVTLNTIEEKILSLQNRKKGLVK 1139 Query: 193 LLLNA 197 ++N+ Sbjct: 1140 KVINS 1144 >gi|308067420|ref|YP_003869025.1| Superfamily II DNA/RNA helicase, SNF2 family [Paenibacillus polymyxa E681] gi|305856699|gb|ADM68487.1| Superfamily II DNA/RNA helicase, SNF2 family [Paenibacillus polymyxa E681] Length = 1121 Score = 128 bits (321), Expect = 5e-28, Method: Composition-based stats. Identities = 37/183 (20%), Positives = 73/183 (39%), Gaps = 21/183 (11%) Query: 26 ASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLAR 83 + + QL + E K + L II + ++ I++ F + L Sbjct: 928 LAGLTRLRQLCCHPGLFIEGYT---GSSAKFEQLLEIITECLSSGKRILIFSQFTTMLQM 984 Query: 84 L---------QKAFPQGRTLDKDPCTI-QEWNEGKIPLLFAHPASCGHGLNLQYGGNILV 133 + + G+T + + +NEG+ L + G GLNL G + ++ Sbjct: 985 IGRELAREGVSYFYLDGQTPAPERVELCSRFNEGERELFLISLKAGGTGLNLT-GADTVI 1043 Query: 134 FFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDL 193 + LWW+ +Q R + G K+ V V L+AQ T+++ + + + K + D Sbjct: 1044 LYDLWWNPAVEEQA-----TNRAHRMGQKKVVQVIRLVAQGTVEDKMYELQQKKKNMIDQ 1098 Query: 194 LLN 196 ++ Sbjct: 1099 VIQ 1101 >gi|260790077|ref|XP_002590070.1| hypothetical protein BRAFLDRAFT_123437 [Branchiostoma floridae] gi|229275258|gb|EEN46081.1| hypothetical protein BRAFLDRAFT_123437 [Branchiostoma floridae] Length = 1878 Score = 128 bits (321), Expect = 6e-28, Method: Composition-based stats. Identities = 33/169 (19%), Positives = 70/169 (41%), Gaps = 19/169 (11%) Query: 44 EEKHWKEVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQK----------AFPQG 91 +K K+ AL++++ + +++ + L++ Sbjct: 1409 PDKEVLVTDSGKLYALDILLTRLKQQGHRVLIYSQMTRMIDILEEFMWHRKHTYMRLDGS 1468 Query: 92 RTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 + ++++ I + + G G+NL + ++F+ W+ QQ ++R Sbjct: 1469 SKISDRRDMVEDFQQRSDIFVFLLSTRAGGLGINLT-AADTVIFYDSDWNPTVDQQAMDR 1527 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 + G + V VY LI + TI+E +LQR R KS IQ ++++ K Sbjct: 1528 -----AHRLGQTKQVTVYRLICKGTIEERILQRAREKSEIQRMVISGGK 1571 >gi|89894130|ref|YP_517617.1| hypothetical protein DSY1384 [Desulfitobacterium hafniense Y51] gi|89333578|dbj|BAE83173.1| hypothetical protein [Desulfitobacterium hafniense Y51] Length = 967 Score = 128 bits (321), Expect = 6e-28, Method: Composition-based stats. Identities = 34/183 (18%), Positives = 66/183 (36%), Gaps = 21/183 (11%) Query: 26 ASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLAR 83 + + Q+ + + + K+ + ++E A ++V F S L Sbjct: 773 LAALTRLRQICSHPGMFIDNYT---GESGKMLLFQELLEDSLAGGHRVLVFSQFTSMLDI 829 Query: 84 L---------QKAFPQGRTLD-KDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILV 133 + + G T + +N G+ + + G GLNL G + ++ Sbjct: 830 IGEYLHSENIDYFYLSGSTKALERSRMAASFNNGEGQVFLISLKAGGTGLNLT-GADTVI 888 Query: 134 FFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDL 193 F WW+ Q +R + G + +V V L+ Q TI+E V K + D Sbjct: 889 HFDPWWNPAVEDQATDR-----AHRIGQQNSVQVIKLLTQGTIEEKVNALQAKKKKLIDS 943 Query: 194 LLN 196 ++ Sbjct: 944 VIQ 946 >gi|168180326|ref|ZP_02614990.1| helicase, SNF2/RAD54 family [Clostridium botulinum NCTC 2916] gi|182668683|gb|EDT80661.1| helicase, SNF2/RAD54 family [Clostridium botulinum NCTC 2916] Length = 1077 Score = 128 bits (321), Expect = 6e-28, Method: Composition-based stats. Identities = 49/213 (23%), Positives = 85/213 (39%), Gaps = 27/213 (12%) Query: 2 KQYHKF----QRELYCDLQ--GENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEK 55 K Y F ++E Y +++ G N S + Q+ + E E + K Sbjct: 851 KVYASFAESAKKEFYKEIRERGFNKSKIKILSIITRLRQICCDPSTFIEN---YEGSNGK 907 Query: 56 IKALEVIIEKA--NAAPIIVAYHFNSDLARLQKAFP---------QGRTL-DKDPCTIQE 103 + L I+ + I++ F S L + + F G T D +++ Sbjct: 908 TETLLDIVNSSINAGHKILLFSQFTSVLKNIAEVFKANNINYLYLDGSTKADVRGSLVKD 967 Query: 104 WNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKR 163 +N GK + + G GLNL +I++ F WW+ Q +R + G K+ Sbjct: 968 FNNGKGDIFLISLKAGGTGLNLT-SADIVIHFDPWWNPAVEDQASDR-----AHRIGQKK 1021 Query: 164 AVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 V V LIA+ TI+E + + + K I D ++ Sbjct: 1022 TVEVIRLIAKGTIEEKIYKIQQKKKEIIDKVIE 1054 >gi|295835764|ref|ZP_06822697.1| SNF2/helicase domain-containing protein [Streptomyces sp. SPB74] gi|295825680|gb|EFG64393.1| SNF2/helicase domain-containing protein [Streptomyces sp. SPB74] Length = 788 Score = 128 bits (321), Expect = 7e-28, Method: Composition-based stats. Identities = 39/210 (18%), Positives = 73/210 (34%), Gaps = 23/210 (10%) Query: 3 QYHKFQRELYCDLQGENIEAFNSASK--TVKCLQLANG-AVYYDEEKHWKEVH--DEKIK 57 Y RE + + Q+ N A Y E + K+ Sbjct: 559 LYEAVVRESLAAIGSAEGMSRRGLVLRLITSLKQICNHPAQYLKEHPDTARLPGRSGKLD 618 Query: 58 ALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFP----------QGRTLDKDPCTIQEWN 105 AL+ ++ A ++V + L G ++ + + Sbjct: 619 ALDELLGTILAEDGSVLVFTQYVRMARLLTAHLAAQAVPAGLLHGGTPVEARDALVDRFQ 678 Query: 106 EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 G +P+L + G GLNL G+ +V + WW+ Q +R + G R V Sbjct: 679 SGALPVLVLSLKAAGTGLNLTRAGH-VVHYDRWWNPAVEDQATDR-----AHRIGQTRHV 732 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 V+ L+A+ T+++ + + K + D +L Sbjct: 733 QVHRLLAEGTVEDRIADLVAGKQALADAVL 762 >gi|256425205|ref|YP_003125858.1| SNF2-related protein [Chitinophaga pinensis DSM 2588] gi|256040113|gb|ACU63657.1| SNF2-related protein [Chitinophaga pinensis DSM 2588] Length = 959 Score = 128 bits (321), Expect = 7e-28, Method: Composition-based stats. Identities = 44/214 (20%), Positives = 83/214 (38%), Gaps = 28/214 (13%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKT-------VKCLQLANGAVYYDEEKHWKEVHDE 54 K Y++ R++Y + + I A+ T + Q+ N ++E H Sbjct: 736 KSYNRI-RDMYKEKLLKQINESGMAASTIYVLEGLTRLRQICNAPQLVEQESHV--TSSV 792 Query: 55 KIKALE-VIIEKANAAPIIVAYHFNSDLARLQKAFP---------QGRTL-DKDPCTIQE 103 K+ L I E A ++V F L + K+ G T + +Q+ Sbjct: 793 KLDELMREISENTGAHKVLVFSQFTGMLQLIAKSMEGEGLPFLYLDGSTKAENRQQLVQQ 852 Query: 104 WNEGK-IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFK 162 + + + + + G GL L + + WW+ QQ I+R + G + Sbjct: 853 FQTDEQVRVFLISLKAGGVGLTLT-AADYVYLVDPWWNPAAEQQAIDR-----THRIGQQ 906 Query: 163 RAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 VF Y +I +++++E +L K I D L++ Sbjct: 907 NKVFAYKMICKDSVEEKILALQERKKMIADDLIS 940 >gi|149023010|gb|EDL79904.1| rCG26684 [Rattus norvegicus] Length = 1032 Score = 128 bits (321), Expect = 7e-28, Method: Composition-based stats. Identities = 33/176 (18%), Positives = 74/176 (42%), Gaps = 21/176 (11%) Query: 44 EEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRT-------- 93 K K+ AL++++ + + +++ + L++ + Sbjct: 567 PGKESLITDSGKLYALDILLTRLKSQGHRVLIYSQMTRMIDLLEEYMVYRKHTYMRLDGS 626 Query: 94 --LDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 + + + ++ I + + G G+NL + ++F+ W+ QQ ++R Sbjct: 627 SKISERRDMVADFQTRNDIFVFLLSTRAGGLGINLT-AADTVIFYDSDWNPTVDQQAMDR 685 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA--LKKETIH 204 + G + V VY LI + TI+E +LQR + KS IQ ++++ K +T+ Sbjct: 686 -----AHRLGQTKQVTVYRLICKGTIEERILQRAKEKSEIQRMVISGGNFKPDTLK 736 >gi|168182529|ref|ZP_02617193.1| helicase, Snf2 family [Clostridium botulinum Bf] gi|182674407|gb|EDT86368.1| helicase, Snf2 family [Clostridium botulinum Bf] Length = 1097 Score = 127 bits (320), Expect = 7e-28, Method: Composition-based stats. Identities = 41/217 (18%), Positives = 84/217 (38%), Gaps = 25/217 (11%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLA-NGAVYYDEEKHWKEVHDEKIKALE 60 + Y + + + L+ + S + QL + ++ DE K K++ Sbjct: 877 RIYKAYMKSIKEKLKNNKEDKITIFSYLTRLRQLCLDPSIIIDEYK----GGSSKLRIAM 932 Query: 61 VIIEKA--NAAPIIVAYHFNSDLARLQKAFPQGRT----------LDKDPCTIQEWNEGK 108 ++E+ I++ F S L + K + + + E+N+ Sbjct: 933 ELVEEGVDEGKKILLFSQFISVLKNISKLLEKEGIEYFYLDGSTNASERIKLVNEFNKNS 992 Query: 109 -IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFV 167 + + + G GLNL N+++ F WW+ Q +R + G K V V Sbjct: 993 HVKVFLISLKAGGTGLNLT-SANLVIHFDPWWNPAIEDQATDR-----AHRIGQKNLVQV 1046 Query: 168 YYLIAQNTIDELVLQRLRTKSTIQDLLLNA-LKKETI 203 L+ + TI+E ++ K + + ++N+ LK E + Sbjct: 1047 IKLVCKGTIEEKIIMLQEDKKELINNVMNSDLKNEHL 1083 >gi|237794935|ref|YP_002862487.1| helicase, Snf2 family [Clostridium botulinum Ba4 str. 657] gi|229261620|gb|ACQ52653.1| helicase, Snf2 family [Clostridium botulinum Ba4 str. 657] Length = 1097 Score = 127 bits (320), Expect = 7e-28, Method: Composition-based stats. Identities = 41/217 (18%), Positives = 84/217 (38%), Gaps = 25/217 (11%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLA-NGAVYYDEEKHWKEVHDEKIKALE 60 + Y + + + L+ + S + QL + ++ DE K K++ Sbjct: 877 RIYKAYMKSIKEKLKNNKEDKITIFSYLTRLRQLCLDPSIIIDEYK----GGSSKLRIAM 932 Query: 61 VIIEKA--NAAPIIVAYHFNSDLARLQKAFPQGRT----------LDKDPCTIQEWNEGK 108 ++E+ I++ F S L + K + + + E+N+ Sbjct: 933 ELVEEGVDEGKKILLFSQFISVLKNISKLLEKEGIEYFYLDGSTNASERIKLVNEFNKNS 992 Query: 109 -IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFV 167 + + + G GLNL N+++ F WW+ Q +R + G K V V Sbjct: 993 HVKVFLISLKAGGTGLNLT-SANLVIHFDPWWNPAIEDQATDR-----AHRIGQKNLVQV 1046 Query: 168 YYLIAQNTIDELVLQRLRTKSTIQDLLLNA-LKKETI 203 L+ + TI+E ++ K + + ++N+ LK E + Sbjct: 1047 IKLVCKGTIEEKIIMLQEDKKELINNVMNSDLKNEHL 1083 >gi|297622033|ref|YP_003710170.1| putative SWI/SNF helicase family protein [Waddlia chondrophila WSU 86-1044] gi|297377334|gb|ADI39164.1| putative SWI/SNF helicase family protein [Waddlia chondrophila WSU 86-1044] Length = 868 Score = 127 bits (320), Expect = 7e-28, Method: Composition-based stats. Identities = 36/179 (20%), Positives = 70/179 (39%), Gaps = 21/179 (11%) Query: 29 TVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQK 86 ++ Q+ + +E K++AL +E K ++ F S L+ ++K Sbjct: 679 LLRLRQICCHPYLVNG----QEGTSGKLEALIADMETIKEEGKKALIFSQFTSMLSIIKK 734 Query: 87 ---------AFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSL 137 + G+T ++ + +IP + G GLNL + ++ F Sbjct: 735 SCSKEGWKFCYLDGQTKERKEQVDHFQTDPEIPFFLISLKAGGVGLNLT-AADYVLLFDP 793 Query: 138 WWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 WW+ +ER + R + G K V + ++I+E +L K + D LL+ Sbjct: 794 WWN-----PAVERQAIDRAHRIGRKDTVIAKRYLCLDSIEEKMLHLNTAKQHLADQLLD 847 >gi|73999783|ref|XP_858164.1| PREDICTED: similar to yeast INO80-like protein isoform 4 [Canis familiaris] Length = 1584 Score = 127 bits (320), Expect = 8e-28, Method: Composition-based stats. Identities = 35/176 (19%), Positives = 72/176 (40%), Gaps = 21/176 (11%) Query: 44 EEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQ----------- 90 K K+ AL+V++ + + +++ + L++ Sbjct: 1119 PGKESLITDSGKLYALDVLLTRLKSQGHRVLIYSQMTRMIDLLEEYMVYRKHTYMRLDGS 1178 Query: 91 GRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 + ++ N I + + G G+NL + ++F+ W+ QQ ++R Sbjct: 1179 SKISERRDMVADFQNRNDIFVFLLSTRAGGLGINLT-AADTVIFYDSDWNPTVDQQAMDR 1237 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA--LKKETIH 204 + G + V VY LI + TI+E +LQR + KS IQ ++++ K +T+ Sbjct: 1238 -----AHRLGQTKQVTVYRLICKGTIEERILQRAKEKSEIQRMVISGGNFKPDTLK 1288 >gi|73999785|ref|XP_535436.2| PREDICTED: similar to yeast INO80-like protein isoform 1 [Canis familiaris] Length = 1519 Score = 127 bits (320), Expect = 8e-28, Method: Composition-based stats. Identities = 35/176 (19%), Positives = 72/176 (40%), Gaps = 21/176 (11%) Query: 44 EEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQ----------- 90 K K+ AL+V++ + + +++ + L++ Sbjct: 1054 PGKESLITDSGKLYALDVLLTRLKSQGHRVLIYSQMTRMIDLLEEYMVYRKHTYMRLDGS 1113 Query: 91 GRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 + ++ N I + + G G+NL + ++F+ W+ QQ ++R Sbjct: 1114 SKISERRDMVADFQNRNDIFVFLLSTRAGGLGINLT-AADTVIFYDSDWNPTVDQQAMDR 1172 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA--LKKETIH 204 + G + V VY LI + TI+E +LQR + KS IQ ++++ K +T+ Sbjct: 1173 -----AHRLGQTKQVTVYRLICKGTIEERILQRAKEKSEIQRMVISGGNFKPDTLK 1223 >gi|312890761|ref|ZP_07750292.1| SNF2-related protein [Mucilaginibacter paludis DSM 18603] gi|311296754|gb|EFQ73892.1| SNF2-related protein [Mucilaginibacter paludis DSM 18603] Length = 964 Score = 127 bits (320), Expect = 8e-28, Method: Composition-based stats. Identities = 32/202 (15%), Positives = 74/202 (36%), Gaps = 20/202 (9%) Query: 6 KFQRELYCDLQGENIEAFNSASK--TVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVII 63 +++ EL L+ +K Q+AN D+ +++ + + Sbjct: 751 EYRNELLKSLEDGTFAKSQMQVLQGLIKLRQIANHPSMIDD--NYEGDSGKFEDVTHTLN 808 Query: 64 EKANA-APIIVAYHF---------NSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLF 113 + +++ F + + + + G T ++ + + K + Sbjct: 809 NVLDGGHKVLIFSQFVKQLTIYRQHFEKEHIPYLYLDGSTQNRGEIVKKFQEDEKTRVFL 868 Query: 114 AHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQ 173 + G GLNL + + WW+ QQ I+R + G + VF+Y I + Sbjct: 869 ISIKAGGVGLNLTEADYVFIL-DPWWNPAVEQQAIDR-----THRIGQTKNVFIYKFITK 922 Query: 174 NTIDELVLQRLRTKSTIQDLLL 195 ++++E +L + K + L+ Sbjct: 923 DSVEEKILALQQRKLKLSSALI 944 >gi|295693012|ref|YP_003601622.1| non-specific serine/threonine protein kinase [Lactobacillus crispatus ST1] gi|295031118|emb|CBL50597.1| Non-specific serine/threonine protein kinase [Lactobacillus crispatus ST1] Length = 1018 Score = 127 bits (320), Expect = 8e-28, Method: Composition-based stats. Identities = 42/212 (19%), Positives = 90/212 (42%), Gaps = 27/212 (12%) Query: 3 QYHKFQRELYCDLQGENIE-----AFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIK 57 Y+ +++ L G+ E F ++ K ++ E H K K+ Sbjct: 797 LYNMQTQKIIAQLNGQGDEDFKRSRFQILAQINKLREICCDPHLLYENYHGK---SNKLI 853 Query: 58 ALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRT----------LDKDPCTIQEWN 105 A +I+ AN I++ F + L L + + R K +Q++N Sbjct: 854 ATIELIKNNLANGHKILLFSQFTAMLDILHENLARLRLPLFTITGSTPKTKRQEQVQKFN 913 Query: 106 EGKIP-LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA 164 + P + + G G+NL G ++++ + WW+L +Q +R + G K + Sbjct: 914 QMAQPGVFLISLKAGGTGINLT-GADVVIHYDPWWNLAAEKQATDR-----AHRIGQKHS 967 Query: 165 VFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 V +Y ++ +++I+E ++ + K+ + D++L Sbjct: 968 VKIYKMVTEDSIEERIIALQQKKAELADIILQ 999 >gi|258545090|ref|ZP_05705324.1| Snf2 family protein [Cardiobacterium hominis ATCC 15826] gi|258519667|gb|EEV88526.1| Snf2 family protein [Cardiobacterium hominis ATCC 15826] Length = 1017 Score = 127 bits (320), Expect = 8e-28, Method: Composition-based stats. Identities = 42/211 (19%), Positives = 76/211 (36%), Gaps = 23/211 (10%) Query: 2 KQYHKFQR----ELYCDLQGENIEAFNSASK--TVKCLQLANGAVYYDEEKHWKEVHDEK 55 K Y ++ +L + + IE +K Q+ N ++ K Sbjct: 796 KLYDATKKRYREQLLHQIAADGIEKSQLHILDGLLKLRQICNSPALL-ADREDYGDDSAK 854 Query: 56 IKAL-EVIIEKANAAPIIVAYHF---------NSDLARLQKAFPQGRTLDKDPCTIQEWN 105 + L E I EK A I+V F D + + G+T D+ Sbjct: 855 LDLLLENIKEKTGAHKILVFSSFVKMLGLIQARLDAENIPYEYLDGQTRDRKAKVENFQT 914 Query: 106 EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 + + + G GLNL + + WW+ Q I+R + G ++ V Sbjct: 915 NDAVRVFLISTKAGGTGLNLTEADYVFI-VDPWWNPAVENQAIDR-----SHRIGQEKHV 968 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 Y +I +N+I+E +L K I + +++ Sbjct: 969 MAYRIICKNSIEEKILALQDKKRRIAESIIS 999 >gi|148696004|gb|EDL27951.1| INO80 complex homolog 1 (S. cerevisiae) [Mus musculus] Length = 1032 Score = 127 bits (320), Expect = 8e-28, Method: Composition-based stats. Identities = 34/176 (19%), Positives = 74/176 (42%), Gaps = 21/176 (11%) Query: 44 EEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRT-------- 93 K K+ AL+V++ + + +++ + L++ + Sbjct: 567 PGKESLITDSGKLYALDVLLTRLKSQGHRVLIYSQMTRMIDLLEEYMVYRKHTYMRLDGS 626 Query: 94 --LDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 + + + ++ I + + G G+NL + ++F+ W+ QQ ++R Sbjct: 627 SKISERRDMVADFQTRNDIFVFLLSTRAGGLGINLT-AADTVIFYDSDWNPTVDQQAMDR 685 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA--LKKETIH 204 + G + V VY LI + TI+E +LQR + KS IQ ++++ K +T+ Sbjct: 686 -----AHRLGQTKQVTVYRLICKGTIEERILQRAKEKSEIQRMVISGGNFKPDTLK 736 >gi|37590263|gb|AAH59235.1| Ino80 protein [Mus musculus] Length = 1088 Score = 127 bits (320), Expect = 8e-28, Method: Composition-based stats. Identities = 34/176 (19%), Positives = 74/176 (42%), Gaps = 21/176 (11%) Query: 44 EEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRT-------- 93 K K+ AL+V++ + + +++ + L++ + Sbjct: 623 PGKESLITDSGKLYALDVLLTRLKSQGHRVLIYSQMTRMIDLLEEYMVYRKHTYMRLDGS 682 Query: 94 --LDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 + + + ++ I + + G G+NL + ++F+ W+ QQ ++R Sbjct: 683 SKISERRDMVADFQTRNDIFVFLLSTRAGGLGINLT-AADTVIFYDSDWNPTVDQQAMDR 741 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA--LKKETIH 204 + G + V VY LI + TI+E +LQR + KS IQ ++++ K +T+ Sbjct: 742 -----AHRLGQTKQVTVYRLICKGTIEERILQRAKEKSEIQRMVISGGNFKPDTLK 792 >gi|94272618|ref|ZP_01292159.1| SNF2-related:Helicase-like [delta proteobacterium MLMS-1] gi|93450064|gb|EAT01427.1| SNF2-related:Helicase-like [delta proteobacterium MLMS-1] Length = 596 Score = 127 bits (320), Expect = 9e-28, Method: Composition-based stats. Identities = 39/212 (18%), Positives = 78/212 (36%), Gaps = 24/212 (11%) Query: 2 KQYHKFQRELYCDLQGENIEAFNS-----ASKTVKCLQLANGA-VYYDEEKHWKEVHDEK 55 + +R LQ + EA S ++ ++ + A + E Sbjct: 371 ALHETIRRRAVEVLQEDEGEAAGSRHLKVLAELMRLRRAACHPRLVLGEGALMAGKLPLF 430 Query: 56 IKALEVIIEKANAAPIIVAYHFNSDLARLQKAFP---------QGRTLDKDPC-TIQEWN 105 + L II +N +V F + LA +++ G T ++ + + Sbjct: 431 AEVLHDII--SNRHKALVFSQFVAHLAIVREYLDGQGIGYQYLDGSTPARERKRAVAAFQ 488 Query: 106 EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 G+ + + G GLNL + ++ WW+ Q +R + G +R V Sbjct: 489 AGEGEVFCISLKAGGTGLNLT-AADYVIHLDPWWNPAVEDQASDR-----AHRIGQERPV 542 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 +Y L+ + +I+E +L K + + LL+ Sbjct: 543 TIYRLVTKGSIEEKILALHGRKRDLAENLLSG 574 >gi|159901735|ref|YP_001547981.1| non-specific serine/threonine protein kinase [Herpetosiphon aurantiacus ATCC 23779] gi|159894774|gb|ABX07853.1| Non-specific serine/threonine protein kinase [Herpetosiphon aurantiacus ATCC 23779] Length = 1021 Score = 127 bits (319), Expect = 9e-28, Method: Composition-based stats. Identities = 34/212 (16%), Positives = 80/212 (37%), Gaps = 24/212 (11%) Query: 2 KQYHKFQRELYCDL------QGENIEAFNSASKTVKCLQLANGAVYYDEE-KHWKEVHDE 54 K Y +++ + L G N ++ Q+ N + + ++ Sbjct: 800 KLYQRYRDQYRAQLLSLIDDHGMNDSRMKVLEGLLRLRQICNHPRLVESTFRGRSAKFEQ 859 Query: 55 KIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQ---------GRTLDKDPCTIQEWN 105 ++ L ++ +A ++ F L L++ Q G+T ++ + Sbjct: 860 LLETLAIL--QAEGHKALIFSQFVQMLTILREHLDQQNVSYTYLDGKTQNRAAVVDRFQT 917 Query: 106 EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 + + + G GLNL + ++ WW+ QQ +R + G ++ V Sbjct: 918 DPHVHFFLISLKAGGVGLNLT-AADYVIHIDPWWNPAVEQQATDR-----THRIGQEKPV 971 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 F+Y LI + +++E ++ K + D ++ + Sbjct: 972 FIYKLIVRESVEEKMVHLQERKRALADSIITS 1003 >gi|149196784|ref|ZP_01873837.1| SNF2-related protein [Lentisphaera araneosa HTCC2155] gi|149139894|gb|EDM28294.1| SNF2-related protein [Lentisphaera araneosa HTCC2155] Length = 880 Score = 127 bits (319), Expect = 9e-28, Method: Composition-based stats. Identities = 43/203 (21%), Positives = 72/203 (35%), Gaps = 21/203 (10%) Query: 9 RELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANA 68 RE D +G + S +K Q+ N + +K K + L I E Sbjct: 659 REAIADSEGIQRKGL-VLSSLMKFKQICNHPDQFLGGGPYKTTESGKFQRLMEICETIKE 717 Query: 69 A--PIIVAYHFNSDLARLQKAFP-----------QGRTLDKDPCTIQEWNEGK-IPLLFA 114 ++V F L K ++ K + + + +P Sbjct: 718 KREKVLVFTQFKEITEELAKFMESYFGHSGLVLHGSISVKKRKEMVARFQSDEYVPFFIL 777 Query: 115 HPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQN 174 + G GLNL N +V F WW+ Q +R + G K+ V V+ + + Sbjct: 778 SIKAGGTGLNLT-AANHVVHFDRWWNPAVENQATDR-----AFRIGQKKNVMVHKFVCKG 831 Query: 175 TIDELVLQRLRTKSTIQDLLLNA 197 TI+E + L K I D +L++ Sbjct: 832 TIEEKISTMLEDKQKISDEVLSS 854 >gi|256850404|ref|ZP_05555832.1| non-specific serine/threonine protein kinase [Lactobacillus crispatus MV-1A-US] gi|262046447|ref|ZP_06019409.1| non-specific serine/threonine protein kinase [Lactobacillus crispatus MV-3A-US] gi|312977470|ref|ZP_07789218.1| Snf2 family protein [Lactobacillus crispatus CTV-05] gi|256712801|gb|EEU27794.1| non-specific serine/threonine protein kinase [Lactobacillus crispatus MV-1A-US] gi|260573318|gb|EEX29876.1| non-specific serine/threonine protein kinase [Lactobacillus crispatus MV-3A-US] gi|310895901|gb|EFQ44967.1| Snf2 family protein [Lactobacillus crispatus CTV-05] Length = 1131 Score = 127 bits (319), Expect = 1e-27, Method: Composition-based stats. Identities = 42/212 (19%), Positives = 90/212 (42%), Gaps = 27/212 (12%) Query: 3 QYHKFQRELYCDLQGENIE-----AFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIK 57 Y+ +++ L G+ E F ++ K ++ E H K K+ Sbjct: 910 LYNMQTQKIIAQLNGQGDEDFKRSRFQILAQITKLREICCDPHLLYENYHGK---SNKLI 966 Query: 58 ALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRT----------LDKDPCTIQEWN 105 A +I+ AN I++ F + L L + + R K +Q++N Sbjct: 967 ATIELIKNNLANGHKILLFSQFTAMLDILHENLARLRLPLFTITGSTPKTKRQEQVQKFN 1026 Query: 106 EGKIP-LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA 164 + P + + G G+NL G ++++ + WW+L +Q +R + G K + Sbjct: 1027 QMAQPGVFLISLKAGGTGINLT-GADVVIHYDPWWNLAAEKQATDR-----AHRIGQKHS 1080 Query: 165 VFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 V +Y ++ +++I+E ++ + K+ + D++L Sbjct: 1081 VKIYKMVTEDSIEERIIALQQKKAELADIILQ 1112 >gi|227878641|ref|ZP_03996558.1| Snf2 family helicase [Lactobacillus crispatus JV-V01] gi|256843239|ref|ZP_05548727.1| non-specific serine/threonine protein kinase [Lactobacillus crispatus 125-2-CHN] gi|227861761|gb|EEJ69363.1| Snf2 family helicase [Lactobacillus crispatus JV-V01] gi|256614659|gb|EEU19860.1| non-specific serine/threonine protein kinase [Lactobacillus crispatus 125-2-CHN] Length = 1175 Score = 127 bits (319), Expect = 1e-27, Method: Composition-based stats. Identities = 42/212 (19%), Positives = 90/212 (42%), Gaps = 27/212 (12%) Query: 3 QYHKFQRELYCDLQGENIE-----AFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIK 57 Y+ +++ L G+ E F ++ K ++ E H K K+ Sbjct: 954 LYNMQTQKIIAQLNGQGDEDFKRSRFQILAQITKLREICCDPHLLYENYHGK---SNKLI 1010 Query: 58 ALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRT----------LDKDPCTIQEWN 105 A +I+ AN I++ F + L L + + R K +Q++N Sbjct: 1011 ATIELIKNNLANGHKILLFSQFTAMLDILHENLARLRLPLFTITGSTPKTKRQEQVQKFN 1070 Query: 106 EGKIP-LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA 164 + P + + G G+NL G ++++ + WW+L +Q +R + G K + Sbjct: 1071 QMAQPGVFLISLKAGGTGINLT-GADVVIHYDPWWNLAAEKQATDR-----AHRIGQKHS 1124 Query: 165 VFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 V +Y ++ +++I+E ++ + K+ + D++L Sbjct: 1125 VKIYKMVTEDSIEERIIALQQKKAELADIILQ 1156 >gi|322373853|ref|ZP_08048388.1| Snf2 family protein [Streptococcus sp. C150] gi|321277225|gb|EFX54295.1| Snf2 family protein [Streptococcus sp. C150] Length = 1031 Score = 127 bits (319), Expect = 1e-27, Method: Composition-based stats. Identities = 38/211 (18%), Positives = 75/211 (35%), Gaps = 25/211 (11%) Query: 1 MKQYHKFQRELYCDLQGENIE--AFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKA 58 + Q + Q+ L + I S + Q+ + + + KI + Sbjct: 811 LAQLQQMQQGLILA-SDQEINRRKVEILSGITRLRQICDTPALFMD----YAGDSGKIDS 865 Query: 59 LEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTL----------DKDPCTIQEWNE 106 L ++ + + +++ F L + + D + +N+ Sbjct: 866 LRDLLSQIKESDHRVLIFSQFRGMLDITEGLLEELGISSYKLTGSTPSDSRQEMTRAFNQ 925 Query: 107 GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVF 166 G + G GLNL G + ++ LWW+ Q I R + G ++ V Sbjct: 926 GSRDAFLISLKAGGVGLNLT-GADTVILIDLWWNPAVEMQAISR-----AHRIGQEQNVE 979 Query: 167 VYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 VY LI + TI+E +L+ K + +L+ Sbjct: 980 VYRLITRGTIEEKILELQEGKKNLVTTVLDG 1010 >gi|171913352|ref|ZP_02928822.1| Non-specific serine/threonine protein kinase [Verrucomicrobium spinosum DSM 4136] Length = 1140 Score = 127 bits (319), Expect = 1e-27, Method: Composition-based stats. Identities = 30/178 (16%), Positives = 66/178 (37%), Gaps = 19/178 (10%) Query: 29 TVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQK 86 + Q+ +E K+ AL ++++ + ++V F + L ++ Sbjct: 943 ITRLRQICCHPALVQPGADDEE--SAKLNALMELLDQLHDEGHKVLVFSQFVAMLKIIRD 1000 Query: 87 ---------AFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSL 137 + G + ++ + + G GLNL + ++ + Sbjct: 1001 KLTGLNRPFHWLTGASQNRADIVKSFQETPDPSVFLLSLKAGGSGLNLT-AASYVILYDP 1059 Query: 138 WWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 WW+ Q I+R + G + V Y L+A+N+I+E + + KS + +L Sbjct: 1060 WWNPAVENQAIDR-----AHRIGQTQPVMAYRLLAKNSIEEKIRHLQQQKSLLSSDVL 1112 >gi|117619195|ref|YP_857375.1| SNF2 family helicase [Aeromonas hydrophila subsp. hydrophila ATCC 7966] gi|117560602|gb|ABK37550.1| SNF2 family helicase [Aeromonas hydrophila subsp. hydrophila ATCC 7966] Length = 1280 Score = 127 bits (319), Expect = 1e-27, Method: Composition-based stats. Identities = 42/209 (20%), Positives = 79/209 (37%), Gaps = 22/209 (10%) Query: 2 KQYHKFQRELYCDLQGENIEAF-NSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 + Y +RE+ +Q + A + S + +L E W + K+ Sbjct: 1063 QLYEATRREVVQQVQSADGRALMHVLSGLTRLRRLCCSPQLVMPE--WSQ-ASSKLDEAM 1119 Query: 61 VIIEKA--NAAPIIVAYHFNSDLARLQKAFPQ----------GRTLDKDPCTIQEWNEGK 108 ++E+A N ++V F L+ L+ Q G + +I + Sbjct: 1120 ALLEEAIGNGHRVLVFSQFVDLLSLLRARIEQQQWDYCYLDGGCSAKSRQESILRFRHEA 1179 Query: 109 IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVY 168 +PL + G GLNL + ++ WW+ Q +R + G + V VY Sbjct: 1180 VPLFLISLKAGGTGLNLTQ-ADTVLHLDPWWNPAVEDQASDR-----AHRMGQTQPVTVY 1233 Query: 169 YLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 L+ + T++E ++ K + D LL+ Sbjct: 1234 RLVCEQTVEEKIVALHDEKRALADGLLSG 1262 >gi|313900256|ref|ZP_07833752.1| SNF2 family N-terminal domain protein [Clostridium sp. HGF2] gi|312954965|gb|EFR36637.1| SNF2 family N-terminal domain protein [Clostridium sp. HGF2] Length = 1117 Score = 127 bits (319), Expect = 1e-27, Method: Composition-based stats. Identities = 37/208 (17%), Positives = 75/208 (36%), Gaps = 21/208 (10%) Query: 1 MKQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 M + +EL +L F ++ Q+ EE K+KA Sbjct: 897 MANLAQVNKELQQELDLVKTNRFQVLGMLMRLRQICCDPRLVYEE---VSQPSSKLKACM 953 Query: 61 VIIEKA--NAAPIIVAYHFNSDLARLQK----------AFPQGRTLDKDPCTIQEWNEGK 108 ++ N +++ +F S L +Q ++ +Q++ + + Sbjct: 954 ELVSSLVENDKSVLLFSNFTSMLDLIQVELQHLHIPYFRMDGSTGKEERRELVQKFQDKE 1013 Query: 109 IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVY 168 + S G G+NL ++ + WW++ Q +R + G V VY Sbjct: 1014 KKVFLISLKSGGTGINLT-AAEAVIHYDPWWNVSAENQASDR-----AYRIGQNSRVQVY 1067 Query: 169 YLIAQNTIDELVLQRLRTKSTIQDLLLN 196 LI +NT++E + + K + D+ + Sbjct: 1068 KLIMRNTVEERIQHLQQMKKELADIFVE 1095 >gi|293380595|ref|ZP_06626650.1| SNF2 family N-terminal domain protein [Lactobacillus crispatus 214-1] gi|290922842|gb|EFD99789.1| SNF2 family N-terminal domain protein [Lactobacillus crispatus 214-1] Length = 1175 Score = 127 bits (319), Expect = 1e-27, Method: Composition-based stats. Identities = 42/212 (19%), Positives = 90/212 (42%), Gaps = 27/212 (12%) Query: 3 QYHKFQRELYCDLQGENIE-----AFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIK 57 Y+ +++ L G+ E F ++ K ++ E H K K+ Sbjct: 954 LYNMQTQKIIAQLNGQGDEDFKRSRFQILAQITKLREICCDPHLLYENYHGK---SNKLI 1010 Query: 58 ALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRT----------LDKDPCTIQEWN 105 A +I+ AN I++ F + L L + + R K +Q++N Sbjct: 1011 ATIELIKNNLANGHKILLFSQFTAMLDILHENLARLRLPLFTITGSTPKTKRQEQVQKFN 1070 Query: 106 EGKIP-LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA 164 + P + + G G+NL G ++++ + WW+L +Q +R + G K + Sbjct: 1071 QMAQPGVFLISLKAGGTGINLT-GADVVIHYDPWWNLAAEKQATDR-----AHRIGQKHS 1124 Query: 165 VFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 V +Y ++ +++I+E ++ + K+ + D++L Sbjct: 1125 VKIYKMVTEDSIEERIIALQQKKAELADIILQ 1156 >gi|269302635|gb|ACZ32735.1| SNF2/helicase domain protein [Chlamydophila pneumoniae LPCoLN] Length = 1166 Score = 127 bits (319), Expect = 1e-27, Method: Composition-based stats. Identities = 31/185 (16%), Positives = 69/185 (37%), Gaps = 18/185 (9%) Query: 24 NSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDL 81 + + + Q+ + + + K L ++ + V + L Sbjct: 970 HVLATLTRLKQICCHPAIF-AKDAPEPGDSAKYDMLMDLLSSLVDSGHKTAVFSQYTKML 1028 Query: 82 ARLQK---------AFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNIL 132 ++K + G T ++ Q + + + + G GLNL G + + Sbjct: 1029 GIIKKDLESRGIPFVYLDGSTKNRLDLVNQFNEDPSLLVFLISLKAGGTGLNL-VGADTV 1087 Query: 133 VFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQD 192 + + +WW+ Q +R+ + G R+V Y L+ NTI+E +L K ++ Sbjct: 1088 IHYDMWWNPAVENQATDRV-----HRIGQSRSVSSYKLVTLNTIEEKILTLQNRKKSLVK 1142 Query: 193 LLLNA 197 ++N+ Sbjct: 1143 KVINS 1147 >gi|317498269|ref|ZP_07956568.1| SNF2 family domain-containing protein [Lachnospiraceae bacterium 5_1_63FAA] gi|316894478|gb|EFV16661.1| SNF2 family domain-containing protein [Lachnospiraceae bacterium 5_1_63FAA] Length = 438 Score = 127 bits (319), Expect = 1e-27, Method: Composition-based stats. Identities = 39/212 (18%), Positives = 83/212 (39%), Gaps = 24/212 (11%) Query: 3 QYHKFQRELYCDLQGEN-IEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEV 61 Y + +R+ Y DL G + I A +K ++ QL G + D+ + V+ K+ AL Sbjct: 226 LYDRIKRDSYADLDGGDHITATTVLTKLLRLQQLTGGFLLQDDSETPVLVNKAKLNALAD 285 Query: 62 IIEK---ANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTI--------------QEW 104 IIE + +++ F ++ + + + +K I Q Sbjct: 286 IIEDYVIGSEKKLVIFARFIPEVKAIIEMVDKLLPKNKKQVAIYGDIKKELRGGLVKQFQ 345 Query: 105 NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA 164 + + + G G+ L + V++S ++ + Q + RI + G + Sbjct: 346 EDPDTMVFVGQIDTAGTGITLT-AADTCVYYSKNYNYATYSQSLSRI-----HRIGQRNV 399 Query: 165 VFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 L + T+DE++ + L K + +++ Sbjct: 400 CTYIDLEVEKTVDEMINKALSKKEDMAKTVVD 431 >gi|73999781|ref|XP_849183.1| PREDICTED: similar to yeast INO80-like protein isoform 3 [Canis familiaris] Length = 1560 Score = 127 bits (319), Expect = 1e-27, Method: Composition-based stats. Identities = 35/176 (19%), Positives = 72/176 (40%), Gaps = 21/176 (11%) Query: 44 EEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQ----------- 90 K K+ AL+V++ + + +++ + L++ Sbjct: 1095 PGKESLITDSGKLYALDVLLTRLKSQGHRVLIYSQMTRMIDLLEEYMVYRKHTYMRLDGS 1154 Query: 91 GRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 + ++ N I + + G G+NL + ++F+ W+ QQ ++R Sbjct: 1155 SKISERRDMVADFQNRNDIFVFLLSTRAGGLGINLT-AADTVIFYDSDWNPTVDQQAMDR 1213 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA--LKKETIH 204 + G + V VY LI + TI+E +LQR + KS IQ ++++ K +T+ Sbjct: 1214 -----AHRLGQTKQVTVYRLICKGTIEERILQRAKEKSEIQRMVISGGNFKPDTLK 1264 >gi|302607772|emb|CBW45684.1| putative helicase [Streptomyces pristinaespiralis] Length = 936 Score = 127 bits (319), Expect = 1e-27, Method: Composition-based stats. Identities = 38/209 (18%), Positives = 85/209 (40%), Gaps = 21/209 (10%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASK--TVKCLQLANG-AVYYDEEKHWKEVHDEKIKA 58 Y K +E+ ++ A + Q+ N A + ++ K++ Sbjct: 709 ALYRKHAQEVMDRIRASQGIARSGLVLKLLTGLKQICNHPAHFLKQDDTALSGRSGKLEL 768 Query: 59 LEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQ----------GRTLDKDPCTIQEWNE 106 L+ +++ A ++V + + L++ + G + + +Q + + Sbjct: 769 LDELLDTITAEGGAVLVFTQYVAMAKLLERHLRERGIGAQLLHGGTPVPRREELVQRFQD 828 Query: 107 GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVF 166 G++P+ + G GLNL + +V + WW+ Q +R + G R+V Sbjct: 829 GEVPVFLLSLKAAGTGLNLTR-ADHVVHYDRWWNPAVEAQATDR-----AYRIGQTRSVQ 882 Query: 167 VYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 V+ +IA+ TI++ + L +K + D +L Sbjct: 883 VHKMIAEGTIEDRIAALLESKKDLADAVL 911 >gi|301754870|ref|XP_002913258.1| PREDICTED: putative DNA helicase INO80 complex homolog 1-like [Ailuropoda melanoleuca] gi|281338216|gb|EFB13800.1| hypothetical protein PANDA_001057 [Ailuropoda melanoleuca] Length = 1561 Score = 127 bits (319), Expect = 1e-27, Method: Composition-based stats. Identities = 35/176 (19%), Positives = 72/176 (40%), Gaps = 21/176 (11%) Query: 44 EEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQ----------- 90 K K+ AL+V++ + + +++ + L++ Sbjct: 1096 PGKESLITDSGKLYALDVLLTRLKSQGHRVLIYSQMTRMIDLLEEYMVYRKHTYMRLDGS 1155 Query: 91 GRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 + ++ N I + + G G+NL + ++F+ W+ QQ ++R Sbjct: 1156 SKISERRDMVADFQNRNDIFVFLLSTRAGGLGINLT-AADTVIFYDSDWNPTVDQQAMDR 1214 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA--LKKETIH 204 + G + V VY LI + TI+E +LQR + KS IQ ++++ K +T+ Sbjct: 1215 -----AHRLGQTKQVTVYRLICKGTIEERILQRAKEKSEIQRMVISGGNFKPDTLK 1265 >gi|149692054|ref|XP_001503533.1| PREDICTED: INO80 complex homolog 1 (S. cerevisiae) [Equus caballus] Length = 1561 Score = 127 bits (319), Expect = 1e-27, Method: Composition-based stats. Identities = 35/176 (19%), Positives = 72/176 (40%), Gaps = 21/176 (11%) Query: 44 EEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQ----------- 90 K K+ AL+V++ + + +++ + L++ Sbjct: 1096 PGKESLITDSGKLYALDVLLTRLKSQGHRVLIYSQMTRMIDLLEEYMVYRKHTYMRLDGS 1155 Query: 91 GRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 + ++ N I + + G G+NL + ++F+ W+ QQ ++R Sbjct: 1156 SKISERRDMVADFQNRNDIFVFLLSTRAGGLGINLT-AADTVIFYDSDWNPTVDQQAMDR 1214 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA--LKKETIH 204 + G + V VY LI + TI+E +LQR + KS IQ ++++ K +T+ Sbjct: 1215 -----AHRLGQTKQVTVYRLICKGTIEERILQRAKEKSEIQRMVISGGNFKPDTLK 1265 >gi|311244967|ref|XP_003121636.1| PREDICTED: putative DNA helicase INO80 complex homolog 1-like [Sus scrofa] Length = 1566 Score = 126 bits (318), Expect = 1e-27, Method: Composition-based stats. Identities = 35/176 (19%), Positives = 72/176 (40%), Gaps = 21/176 (11%) Query: 44 EEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQ----------- 90 K K+ AL+V++ + + +++ + L++ Sbjct: 1101 PGKESLITDSGKLYALDVLLTRLKSQGHRVLIYSQMTRMIDLLEEYMVYRKHTYMRLDGS 1160 Query: 91 GRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 + ++ N I + + G G+NL + ++F+ W+ QQ ++R Sbjct: 1161 SKISERRDMVADFQNRNDIFVFLLSTRAGGLGINLT-AADTVIFYDSDWNPTVDQQAMDR 1219 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA--LKKETIH 204 + G + V VY LI + TI+E +LQR + KS IQ ++++ K +T+ Sbjct: 1220 -----AHRLGQTKQVTVYRLICKGTIEERILQRAKEKSEIQRMVISGGNFKPDTLK 1270 >gi|291403204|ref|XP_002718017.1| PREDICTED: INO80 complex homolog 1 [Oryctolagus cuniculus] Length = 1559 Score = 126 bits (318), Expect = 1e-27, Method: Composition-based stats. Identities = 35/176 (19%), Positives = 72/176 (40%), Gaps = 21/176 (11%) Query: 44 EEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQ----------- 90 K K+ AL+V++ + + +++ + L++ Sbjct: 1094 PGKESLITDSGKLYALDVLLTRLKSQGHRVLIYSQMTRMIDLLEEYMVYRKHTYMRLDGS 1153 Query: 91 GRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 + ++ N I + + G G+NL + ++F+ W+ QQ ++R Sbjct: 1154 SKISERRDMVADFQNRNDIFVFLLSTRAGGLGINLT-AADTVIFYDSDWNPTVDQQAMDR 1212 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA--LKKETIH 204 + G + V VY LI + TI+E +LQR + KS IQ ++++ K +T+ Sbjct: 1213 -----AHRLGQTKQVTVYRLICKGTIEERILQRAKEKSEIQRMVISGGNFKPDTLK 1263 >gi|331218680|ref|XP_003322017.1| helicase SWR1 [Puccinia graminis f. sp. tritici CRL 75-36-700-3] gi|309301007|gb|EFP77598.1| helicase SWR1 [Puccinia graminis f. sp. tritici CRL 75-36-700-3] Length = 1764 Score = 126 bits (318), Expect = 1e-27, Method: Composition-based stats. Identities = 34/158 (21%), Positives = 70/158 (44%), Gaps = 19/158 (12%) Query: 51 VHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQK----------AFPQGRTLDKDP 98 + K+ L+ ++++ +++ + + +++ T+ + Sbjct: 1424 LDSGKLARLDSLLQELKTGGHRVLIYFQMTRMIDLMEEYLSFRHYRYLRLDGSSTISERR 1483 Query: 99 CTIQEW-NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 + +W N +I + + G G+NL + ++F+ W+ QQ ++R Sbjct: 1484 DMVMDWQNRPEIFIFLLSTRAGGLGINLT-AADTVIFYDCDWNPSNDQQAMDR-----AH 1537 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 + G KR V VY LI TIDE +L+ RTK T+QD ++ Sbjct: 1538 RLGQKRQVTVYRLITTGTIDERILKLARTKKTVQDAVV 1575 >gi|269302622|gb|ACZ32722.1| SNF2/helicase domain protein [Chlamydophila pneumoniae LPCoLN] Length = 1215 Score = 126 bits (318), Expect = 1e-27, Method: Composition-based stats. Identities = 36/215 (16%), Positives = 89/215 (41%), Gaps = 21/215 (9%) Query: 6 KFQRELYCDLQGENIEAFNSA---SKTVKCLQLANG-AVYYDEEKHWKEVHDEKIKALEV 61 + ++ L+ A N + Q+ + AV++ + +K K A Sbjct: 965 QREKSHIQKLETPEEPATNFLHIFALLNHLKQICDHPAVFFKDPDQYKNYESGKWNAFVK 1024 Query: 62 IIEKA--NAAPIIVAYHFNSDLARL---------QKAFPQGRTLDKDPCTIQEWNEGKIP 110 +++++ ++V + + + + A QG++L++ + Sbjct: 1025 LLKESLNAGYKVVVFSQYIHMIRIITLYLEEIGIKYASIQGKSLNRKEEIETFTTDPNCQ 1084 Query: 111 LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYL 170 + + G G+NL GN+++ + WW+ + Q ++R+ + G K VF+Y L Sbjct: 1085 VFVGSLLAAGTGINLT-AGNVVIMYDRWWNPAKENQALDRV-----HRIGQKNTVFIYKL 1138 Query: 171 IAQNTIDELVLQRLRTKSTIQDLLLNALKKETIHV 205 I ++T++E + + K + D ++ + +H+ Sbjct: 1139 ITEDTLEERIHYLIEKKIRLLDKVIASQDSNILHM 1173 >gi|15618744|ref|NP_225030.1| SWI/SNF family helicase_1 [Chlamydophila pneumoniae CWL029] gi|16752203|ref|NP_445571.1| Snf2/Rad54 family helicase [Chlamydophila pneumoniae AR39] gi|33242195|ref|NP_877136.1| SNF protein [Chlamydophila pneumoniae TW-183] gi|4377149|gb|AAD18973.1| SWI/SNF family helicase_1 [Chlamydophila pneumoniae CWL029] gi|7189947|gb|AAF38809.1| helicase, Snf2/Rad54 family [Chlamydophila pneumoniae AR39] gi|33236706|gb|AAP98793.1| SNF protein [Chlamydophila pneumoniae TW-183] Length = 1215 Score = 126 bits (318), Expect = 1e-27, Method: Composition-based stats. Identities = 36/215 (16%), Positives = 89/215 (41%), Gaps = 21/215 (9%) Query: 6 KFQRELYCDLQGENIEAFNSA---SKTVKCLQLANG-AVYYDEEKHWKEVHDEKIKALEV 61 + ++ L+ A N + Q+ + AV++ + +K K A Sbjct: 965 QREKSHIQKLETPEEPATNFLHIFALLNHLKQICDHPAVFFKDPDQYKNYESGKWNAFVK 1024 Query: 62 IIEKA--NAAPIIVAYHFNSDLARL---------QKAFPQGRTLDKDPCTIQEWNEGKIP 110 +++++ ++V + + + + A QG++L++ + Sbjct: 1025 LLKESLNAGYKVVVFSQYIHMIRIITLYLEEIGIKYASIQGKSLNRKEEIETFTTDPNCQ 1084 Query: 111 LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYL 170 + + G G+NL GN+++ + WW+ + Q ++R+ + G K VF+Y L Sbjct: 1085 VFVGSLLAAGTGINLT-AGNVVIMYDRWWNPAKENQALDRV-----HRIGQKNTVFIYKL 1138 Query: 171 IAQNTIDELVLQRLRTKSTIQDLLLNALKKETIHV 205 I ++T++E + + K + D ++ + +H+ Sbjct: 1139 ITEDTLEERIHYLIEKKIRLLDKVIASQDSNILHM 1173 >gi|254518034|ref|ZP_05130090.1| DNA/RNA helicase [Clostridium sp. 7_2_43FAA] gi|226911783|gb|EEH96984.1| DNA/RNA helicase [Clostridium sp. 7_2_43FAA] Length = 1010 Score = 126 bits (318), Expect = 1e-27, Method: Composition-based stats. Identities = 46/195 (23%), Positives = 83/195 (42%), Gaps = 25/195 (12%) Query: 26 ASKTVKCLQLA-NGAVYYDEEKHWKEVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLA 82 S K QL + ++ D+ K KIKA++ II++ + II+ F S L Sbjct: 815 LSYLTKLRQLCLDPSLLIDDFKE----ESAKIKAVKEIIKETIDSNKKIIIFSQFTSVLK 870 Query: 83 RL---------QKAFPQGRTLDKDP-CTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNIL 132 ++ + G K+ + E+N + + G GLNL +++ Sbjct: 871 KIGNKLEEDDINYLYLDGSIKAKERINLVDEFNNRDKNIFLISLKAGGVGLNLT-SASVV 929 Query: 133 VFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQD 192 V F WW+ Q +R + G K V V LI+++TI+E +++ K + Sbjct: 930 VHFDPWWNPAVQDQATDR-----AHRIGQKNIVEVIKLISKDTIEEKIIKLQEEKKELIS 984 Query: 193 LLL--NALKKETIHV 205 ++ +AL ET++ Sbjct: 985 KIIDGDALSGETLNT 999 >gi|296214144|ref|XP_002753574.1| PREDICTED: putative DNA helicase INO80 complex homolog 1 [Callithrix jacchus] Length = 1556 Score = 126 bits (318), Expect = 1e-27, Method: Composition-based stats. Identities = 35/176 (19%), Positives = 72/176 (40%), Gaps = 21/176 (11%) Query: 44 EEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQ----------- 90 K K+ AL+V++ + + +++ + L++ Sbjct: 1092 PGKESLITDSGKLYALDVLLTRLKSQGHRVLIYSQMTRMIDLLEEYMVYRKHTYMRLDGS 1151 Query: 91 GRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 + ++ N I + + G G+NL + ++F+ W+ QQ ++R Sbjct: 1152 SKISERRDMVADFQNRNDIFVFLLSTRAGGLGINLT-AADTVIFYDSDWNPTVDQQAMDR 1210 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA--LKKETIH 204 + G + V VY LI + TI+E +LQR + KS IQ ++++ K +T+ Sbjct: 1211 -----AHRLGQTKQVTVYRLICKGTIEERILQRAKEKSEIQRMVISGGNFKPDTLK 1261 >gi|126277710|ref|XP_001370967.1| PREDICTED: similar to INO80 complex homolog 1 [Monodelphis domestica] Length = 1558 Score = 126 bits (318), Expect = 1e-27, Method: Composition-based stats. Identities = 35/176 (19%), Positives = 71/176 (40%), Gaps = 21/176 (11%) Query: 44 EEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQ----------- 90 K K+ AL+V++ + + +++ + L++ Sbjct: 1093 PGKESLITDSGKLYALDVLLTRLKSQGHRVLIYSQMTRMIDLLEEYMVYRKHTYMRLDGS 1152 Query: 91 GRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 + ++ N I + + G G+NL + ++F+ W+ QQ ++R Sbjct: 1153 SKISERRDMVADFQNRNDIFVFLLSTRAGGLGINLT-AADTVIFYDSDWNPTVDQQAMDR 1211 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA--LKKETIH 204 + G + V VY LI + TI+E +LQR KS IQ ++++ K +T+ Sbjct: 1212 -----AHRLGQTKQVTVYRLICKGTIEERILQRANEKSEIQQMVISGGNFKPDTLK 1262 >gi|119612874|gb|EAW92468.1| INO80 complex homolog 1 (S. cerevisiae), isoform CRA_a [Homo sapiens] Length = 1313 Score = 126 bits (318), Expect = 1e-27, Method: Composition-based stats. Identities = 35/176 (19%), Positives = 72/176 (40%), Gaps = 21/176 (11%) Query: 44 EEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQ----------- 90 K K+ AL+V++ + + +++ + L++ Sbjct: 819 PGKESLITDSGKLYALDVLLTRLKSQGHRVLIYSQMTRMIDLLEEYMVYRKHTYMRLDGS 878 Query: 91 GRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 + ++ N I + + G G+NL + ++F+ W+ QQ ++R Sbjct: 879 SKISERRDMVADFQNRNDIFVFLLSTRAGGLGINLT-AADTVIFYDSDWNPTVDQQAMDR 937 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA--LKKETIH 204 + G + V VY LI + TI+E +LQR + KS IQ ++++ K +T+ Sbjct: 938 -----AHRLGQTKQVTVYRLICKGTIEERILQRAKEKSEIQRMVISGGNFKPDTLK 988 >gi|6330933|dbj|BAA86573.1| KIAA1259 protein [Homo sapiens] Length = 1561 Score = 126 bits (318), Expect = 1e-27, Method: Composition-based stats. Identities = 35/176 (19%), Positives = 72/176 (40%), Gaps = 21/176 (11%) Query: 44 EEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQ----------- 90 K K+ AL+V++ + + +++ + L++ Sbjct: 1096 PGKESLITDSGKLYALDVLLTRLKSQGHRVLIYSQMTRMIDLLEEYMVYRKHTYMRLDGS 1155 Query: 91 GRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 + ++ N I + + G G+NL + ++F+ W+ QQ ++R Sbjct: 1156 SKISERRDMVADFQNRNDIFVFLLSTRAGGLGINLT-AADTVIFYDSDWNPTVDQQAMDR 1214 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA--LKKETIH 204 + G + V VY LI + TI+E +LQR + KS IQ ++++ K +T+ Sbjct: 1215 -----AHRLGQTKQVTVYRLICKGTIEERILQRAKEKSEIQRMVISGGNFKPDTLK 1265 >gi|315639730|ref|ZP_07894869.1| Snf2 family protein [Enterococcus italicus DSM 15952] gi|315484507|gb|EFU74964.1| Snf2 family protein [Enterococcus italicus DSM 15952] Length = 1055 Score = 126 bits (318), Expect = 1e-27, Method: Composition-based stats. Identities = 35/194 (18%), Positives = 79/194 (40%), Gaps = 21/194 (10%) Query: 24 NSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDL 81 + + + Q+ + +E + K++ ++ ++ A N +++ F S L Sbjct: 857 SILAGLTRLRQICCDPRLFVDE---YQGGSGKLEQVKDLLLAAKENKRRVLLFSQFTSML 913 Query: 82 ARLQKAFPQ---------GRTLDKDP-CTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNI 131 + + + G T KD + +NEG+ + + G GLNL G N Sbjct: 914 SLIADELDEMGLSHFYLRGSTPPKDRIEMVDAFNEGEADVFLISLKAGGTGLNLT-GANT 972 Query: 132 LVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQ 191 ++ + LWW+ +Q R + G K+ V ++ +I++ TI+E + K + Sbjct: 973 VILYDLWWNPAVEEQAAGR-----AHRMGQKQVVEIWRMISEGTIEERMDDLQNEKRELF 1027 Query: 192 DLLLNALKKETIHV 205 ++ + + + Sbjct: 1028 QKVIQGNEAQLQQM 1041 >gi|38708321|ref|NP_060023.1| putative DNA helicase INO80 complex homolog 1 [Homo sapiens] gi|114149322|sp|Q9ULG1|INO80_HUMAN RecName: Full=Putative DNA helicase INO80 complex homolog 1; Short=hINO80 gi|119612875|gb|EAW92469.1| INO80 complex homolog 1 (S. cerevisiae), isoform CRA_b [Homo sapiens] gi|119612876|gb|EAW92470.1| INO80 complex homolog 1 (S. cerevisiae), isoform CRA_b [Homo sapiens] gi|148921591|gb|AAI46786.1| INO80 protein [Homo sapiens] gi|168269776|dbj|BAG10015.1| DNA helicase INO80 complex homolog 1 [synthetic construct] Length = 1556 Score = 126 bits (318), Expect = 1e-27, Method: Composition-based stats. Identities = 35/176 (19%), Positives = 72/176 (40%), Gaps = 21/176 (11%) Query: 44 EEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQ----------- 90 K K+ AL+V++ + + +++ + L++ Sbjct: 1091 PGKESLITDSGKLYALDVLLTRLKSQGHRVLIYSQMTRMIDLLEEYMVYRKHTYMRLDGS 1150 Query: 91 GRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 + ++ N I + + G G+NL + ++F+ W+ QQ ++R Sbjct: 1151 SKISERRDMVADFQNRNDIFVFLLSTRAGGLGINLT-AADTVIFYDSDWNPTVDQQAMDR 1209 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA--LKKETIH 204 + G + V VY LI + TI+E +LQR + KS IQ ++++ K +T+ Sbjct: 1210 -----AHRLGQTKQVTVYRLICKGTIEERILQRAKEKSEIQRMVISGGNFKPDTLK 1260 >gi|297296191|ref|XP_002804786.1| PREDICTED: putative DNA helicase INO80 complex homolog 1-like [Macaca mulatta] Length = 1478 Score = 126 bits (318), Expect = 1e-27, Method: Composition-based stats. Identities = 35/176 (19%), Positives = 72/176 (40%), Gaps = 21/176 (11%) Query: 44 EEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQ----------- 90 K K+ AL+V++ + + +++ + L++ Sbjct: 1013 PGKESLITDSGKLYALDVLLTRLKSQGHRVLIYSQMTRMIDLLEEYMVYRKHTYMRLDGS 1072 Query: 91 GRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 + ++ N I + + G G+NL + ++F+ W+ QQ ++R Sbjct: 1073 SKISERRDMVADFQNRNDIFVFLLSTRAGGLGINLT-AADTVIFYDSDWNPTVDQQAMDR 1131 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA--LKKETIH 204 + G + V VY LI + TI+E +LQR + KS IQ ++++ K +T+ Sbjct: 1132 -----AHRLGQTKQVTVYRLICKGTIEERILQRAKEKSEIQRMVISGGNFKPDTLK 1182 >gi|149918387|ref|ZP_01906877.1| swf/snf family helicase [Plesiocystis pacifica SIR-1] gi|149820687|gb|EDM80097.1| swf/snf family helicase [Plesiocystis pacifica SIR-1] Length = 1385 Score = 126 bits (318), Expect = 1e-27, Method: Composition-based stats. Identities = 41/208 (19%), Positives = 75/208 (36%), Gaps = 20/208 (9%) Query: 4 YHKFQRELYCDLQGEN--IEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEV 61 Y +R L+G + ++ + Q A DE D + L Sbjct: 1170 YEALRRRALESLEGGEQHTQRVRILAELTRLRQAAVDPRLLDERGPAGAKIDALTRQLLS 1229 Query: 62 IIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLD----------KDPCTIQEWNEGKIPL 111 + E+ +V F +A +++AF + + + G+ + Sbjct: 1230 LREE--GHRALVFTQFLGAMALMRQAFEAAGIEYLELDGATPAAERARRVDAFQAGEGDV 1287 Query: 112 LFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLI 171 + G G+NL G + ++ WW+ Q +R + G R V VY L+ Sbjct: 1288 FMLSLRAGGVGMNLT-GADYVLHLDPWWNPAVEDQATDR-----AHRLGQSRPVTVYRLV 1341 Query: 172 AQNTIDELVLQRLRTKSTIQDLLLNALK 199 ++ TI+E +L K + D LL L+ Sbjct: 1342 SKGTIEEKILALHAEKRELTDDLLFGLE 1369 >gi|119612877|gb|EAW92471.1| INO80 complex homolog 1 (S. cerevisiae), isoform CRA_c [Homo sapiens] Length = 1616 Score = 126 bits (318), Expect = 1e-27, Method: Composition-based stats. Identities = 35/176 (19%), Positives = 72/176 (40%), Gaps = 21/176 (11%) Query: 44 EEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQ----------- 90 K K+ AL+V++ + + +++ + L++ Sbjct: 1122 PGKESLITDSGKLYALDVLLTRLKSQGHRVLIYSQMTRMIDLLEEYMVYRKHTYMRLDGS 1181 Query: 91 GRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 + ++ N I + + G G+NL + ++F+ W+ QQ ++R Sbjct: 1182 SKISERRDMVADFQNRNDIFVFLLSTRAGGLGINLT-AADTVIFYDSDWNPTVDQQAMDR 1240 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA--LKKETIH 204 + G + V VY LI + TI+E +LQR + KS IQ ++++ K +T+ Sbjct: 1241 -----AHRLGQTKQVTVYRLICKGTIEERILQRAKEKSEIQRMVISGGNFKPDTLK 1291 >gi|114656423|ref|XP_510320.2| PREDICTED: INO80 complex homolog 1 [Pan troglodytes] Length = 1556 Score = 126 bits (318), Expect = 1e-27, Method: Composition-based stats. Identities = 35/176 (19%), Positives = 72/176 (40%), Gaps = 21/176 (11%) Query: 44 EEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQ----------- 90 K K+ AL+V++ + + +++ + L++ Sbjct: 1091 PGKESLITDSGKLYALDVLLTRLKSQGHRVLIYSQMTRMIDLLEEYMVYRKHTYMRLDGS 1150 Query: 91 GRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 + ++ N I + + G G+NL + ++F+ W+ QQ ++R Sbjct: 1151 SKISERRDMVADFQNRNDIFVFLLSTRAGGLGINLT-AADTVIFYDSDWNPTVDQQAMDR 1209 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA--LKKETIH 204 + G + V VY LI + TI+E +LQR + KS IQ ++++ K +T+ Sbjct: 1210 -----AHRLGQTKQVTVYRLICKGTIEERILQRAKEKSEIQRMVISGGNFKPDTLK 1260 >gi|284041008|ref|YP_003390938.1| SNF2-related protein [Spirosoma linguale DSM 74] gi|283820301|gb|ADB42139.1| SNF2-related protein [Spirosoma linguale DSM 74] Length = 1003 Score = 126 bits (318), Expect = 1e-27, Method: Composition-based stats. Identities = 45/210 (21%), Positives = 79/210 (37%), Gaps = 26/210 (12%) Query: 3 QYHKFQ---RELYCD-LQGENIEAFNSASK--TVKCLQLANGAVYYDEEKHWKEVHDEKI 56 QY + + R L + ++ E I K Q+AN D E E K+ Sbjct: 783 QYEEAKSYYRNLILERIEEEGIAKSQMVVLQGLTKLRQIANHPRMVDAE---YEGDSGKL 839 Query: 57 KALEVIIEKA--NAAPIIVAYHFNSDL---------ARLQKAFPQGRTLDKDPCTIQEWN 105 + + +E A ++V F L ++ A+ G T+D+ Sbjct: 840 DDMLMRLESAMTENHKVLVFSQFIKHLTVVRQYLKEKNIKYAYLDGSTVDRQSQVELFQT 899 Query: 106 EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 + + L + G G NL + + WW+ Q ++R + G ++ V Sbjct: 900 DDSVKLFLISLKAGGLGHNLT-AADYVFILDPWWNPAIEAQAVDR-----AHRIGQQKTV 953 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 F Y IA+NT++E +L R K + L+ Sbjct: 954 FTYKFIAKNTVEEKILSLQRAKQQLAGSLI 983 >gi|296138502|ref|YP_003645745.1| SNF2-related protein [Tsukamurella paurometabola DSM 20162] gi|296026636|gb|ADG77406.1| SNF2-related protein [Tsukamurella paurometabola DSM 20162] Length = 1081 Score = 126 bits (318), Expect = 1e-27, Method: Composition-based stats. Identities = 39/177 (22%), Positives = 77/177 (43%), Gaps = 20/177 (11%) Query: 32 CLQLANGAVYYDEEKHWKEVH--DEKIKALEVIIEKANAAPIIVAYHFNS---------D 80 +LA DEE ++V D + L+ ++E+ +A ++V F D Sbjct: 895 LRRLALDPSLVDEELAVEDVAKLDYLAEKLDELLEEKHA--VLVFSQFTGFLRKAAERLD 952 Query: 81 LARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWD 140 ++ A+ G T D+ I+++ G++ + + G GLNL + WW+ Sbjct: 953 EEGVEYAYLDGSTTDR-AAAIEKFTSGEVQVFLISLKAGGFGLNLVQ-ADYCFLLDPWWN 1010 Query: 141 LEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 Q I+R + G R+V VY L++ TI++ V++ K+ + + ++ Sbjct: 1011 PAAEAQAIDR-----AHRIGQTRSVMVYRLVSAGTIEDKVMELKERKAALFESVVGG 1062 >gi|310640172|ref|YP_003944930.1| helicase, swf/snf [Paenibacillus polymyxa SC2] gi|309245122|gb|ADO54689.1| Helicase, SWF/SNF [Paenibacillus polymyxa SC2] Length = 1121 Score = 126 bits (318), Expect = 1e-27, Method: Composition-based stats. Identities = 36/183 (19%), Positives = 72/183 (39%), Gaps = 21/183 (11%) Query: 26 ASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLAR 83 + + QL + E K + L II + + +++ F + L Sbjct: 928 LAGLTRLRQLCCHPGLFIEGYT---GSSAKFEQLLEIITECLGSGKRMLIFSQFTTMLQM 984 Query: 84 L-----QKAFPQGRTLDKDPCTIQ-----EWNEGKIPLLFAHPASCGHGLNLQYGGNILV 133 + ++ P + P + +NEG+ L + G GLNL G + ++ Sbjct: 985 VGRELSREGVPYFYLDGQTPAPERVELCSRFNEGERELFLISLKAGGTGLNLT-GADTVI 1043 Query: 134 FFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDL 193 + LWW+ +Q R + G K+ V V L+AQ T+++ + + + K + D Sbjct: 1044 LYDLWWNPAVEEQA-----TNRAHRMGQKKVVQVIRLVAQGTVEDKMYELQQKKKNLIDQ 1098 Query: 194 LLN 196 ++ Sbjct: 1099 VIQ 1101 >gi|325978978|ref|YP_004288694.1| SNF2 family protein [Streptococcus gallolyticus subsp. gallolyticus ATCC BAA-2069] gi|325178906|emb|CBZ48950.1| SNF2 family protein [Streptococcus gallolyticus subsp. gallolyticus ATCC BAA-2069] Length = 1029 Score = 126 bits (318), Expect = 1e-27, Method: Composition-based stats. Identities = 39/212 (18%), Positives = 74/212 (34%), Gaps = 27/212 (12%) Query: 1 MKQYHKFQRELYCDLQGENIE--AFNSASKTVKCLQLA-NGAVYYDEEKHWKEVHDEKIK 57 + Q + +E +I S + Q+ +++ D K+ Sbjct: 811 LAQLRQM-QETIAGASDADINRRKIEILSGITRLRQICDTPSLFMDYNGE-----SGKLD 864 Query: 58 ALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQ----------GRTLDKDPCTIQEWN 105 +L ++ + N ++ F L +K + + + +N Sbjct: 865 SLRTLLTQIKENGHRALIFSQFRGMLDIAEKEMEKLGLTSYKITGSTPANARQEMTRAFN 924 Query: 106 EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 G + G GLNL G + ++ LWW+ Q I R + G K V Sbjct: 925 NGSKDTFLISLKAGGVGLNLT-GADTVILIDLWWNPAVEMQAISR-----AHRIGQKENV 978 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 VY LI + TI+E +L+ +K + +L+ Sbjct: 979 EVYRLITRGTIEEKILEMQESKKNLVTTVLDG 1010 >gi|256027374|ref|ZP_05441208.1| SWF/SNF family helicase [Fusobacterium sp. D11] gi|289765340|ref|ZP_06524718.1| SWF/SNF family helicase [Fusobacterium sp. D11] gi|289716895|gb|EFD80907.1| SWF/SNF family helicase [Fusobacterium sp. D11] Length = 1088 Score = 126 bits (318), Expect = 1e-27, Method: Composition-based stats. Identities = 42/204 (20%), Positives = 74/204 (36%), Gaps = 25/204 (12%) Query: 10 ELYCDLQGENIEAFNSASKTVKCLQLANGA--VYYDEEKHWKEVHDEKIKALEVIIEKA- 66 E N + K Q+ +Y D KI A +I+K+ Sbjct: 878 ETLAQSIDVNTNKIEVLAMLTKLRQICIDPRLLYED-----ISSSSSKINACIELIKKSI 932 Query: 67 -NAAPIIVAYHFNSDLAR---------LQKAFPQGRTLD-KDPCTIQEWNEGKIPLLFAH 115 N I++ F + L + G T K ++++ +PL Sbjct: 933 ENKQRILLFSSFTTVLDLVAQECDNLSIPYFMLTGETNKVKRNQLVEDFQNEAVPLFLIS 992 Query: 116 PASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNT 175 + G GLNL ++++ WW++ Q +R + G + V V+ LI +NT Sbjct: 993 LKAGGTGLNLTK-ASVVIHLDPWWNISAQNQATDR-----AHRIGQEDTVQVFNLITKNT 1046 Query: 176 IDELVLQRLRTKSTIQDLLLNALK 199 I+E +L K + D+ + K Sbjct: 1047 IEEKILNLQNKKKELSDIFVENSK 1070 >gi|237744605|ref|ZP_04575086.1| SWF/SNF family helicase [Fusobacterium sp. 7_1] gi|229431834|gb|EEO42046.1| SWF/SNF family helicase [Fusobacterium sp. 7_1] Length = 1088 Score = 126 bits (318), Expect = 1e-27, Method: Composition-based stats. Identities = 42/204 (20%), Positives = 74/204 (36%), Gaps = 25/204 (12%) Query: 10 ELYCDLQGENIEAFNSASKTVKCLQLANGA--VYYDEEKHWKEVHDEKIKALEVIIEKA- 66 E N + K Q+ +Y D KI A +I+K+ Sbjct: 878 ETLAQSIDVNTNKIEVLAMLTKLRQICIDPRLLYED-----ISSSSSKINACIELIKKSI 932 Query: 67 -NAAPIIVAYHFNSDLAR---------LQKAFPQGRTLD-KDPCTIQEWNEGKIPLLFAH 115 N I++ F + L + G T K ++++ +PL Sbjct: 933 ENKQRILLFSSFTTVLDLVAQECDNLSIPYFMLTGETNKVKRNQLVEDFQNEAVPLFLIS 992 Query: 116 PASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNT 175 + G GLNL ++++ WW++ Q +R + G + V V+ LI +NT Sbjct: 993 LKAGGTGLNLTK-ASVVIHLDPWWNISAQNQATDR-----AHRIGQEDTVQVFNLITKNT 1046 Query: 176 IDELVLQRLRTKSTIQDLLLNALK 199 I+E +L K + D+ + K Sbjct: 1047 IEEKILNLQNKKKELSDIFVENSK 1070 >gi|288906011|ref|YP_003431233.1| SWF/SNF family helicase [Streptococcus gallolyticus UCN34] gi|288732737|emb|CBI14311.1| putative SWF/SNF family helicase [Streptococcus gallolyticus UCN34] Length = 1029 Score = 126 bits (318), Expect = 1e-27, Method: Composition-based stats. Identities = 39/212 (18%), Positives = 74/212 (34%), Gaps = 27/212 (12%) Query: 1 MKQYHKFQRELYCDLQGENIE--AFNSASKTVKCLQLA-NGAVYYDEEKHWKEVHDEKIK 57 + Q + +E +I S + Q+ +++ D K+ Sbjct: 811 LAQLRQM-QETIAGASDADINRRKIEILSGITRLRQICDTPSLFMDYNGE-----SGKLD 864 Query: 58 ALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQ----------GRTLDKDPCTIQEWN 105 +L ++ + N ++ F L +K + + + +N Sbjct: 865 SLRTLLTQIKENGHRALIFSQFRGMLDIAEKEMEKLGLTSYKITGSTPANARQEMTRAFN 924 Query: 106 EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 G + G GLNL G + ++ LWW+ Q I R + G K V Sbjct: 925 NGSKDTFLISLKAGGVGLNLT-GADTVILIDLWWNPAVEMQAISR-----AHRIGQKENV 978 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 VY LI + TI+E +L+ +K + +L+ Sbjct: 979 EVYRLITRGTIEEKILEMQESKKNLVTTVLDG 1010 >gi|119714405|ref|YP_921370.1| SNF2-related protein [Nocardioides sp. JS614] gi|119535066|gb|ABL79683.1| SNF2-related protein [Nocardioides sp. JS614] Length = 903 Score = 126 bits (318), Expect = 1e-27, Method: Composition-based stats. Identities = 29/156 (18%), Positives = 62/156 (39%), Gaps = 18/156 (11%) Query: 53 DEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRT----------LDKDPCT 100 EK+ L+ ++ A ++V + + L+ + + + Sbjct: 730 SEKVDLLDELVGTVLAEDGAVLVFTQYVAMARLLEGHLARAGVPHQLLHGGTPVREREAM 789 Query: 101 IQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 + + G+ P+ + G GLNL + +V WW+ +Q +R + G Sbjct: 790 VARFQAGETPVFLLSLKAGGTGLNLTR-ADHVVHVDRWWNPAVEEQATDR-----AYRIG 843 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + V V+ +I + T++E V + L K + D +L+ Sbjct: 844 QTKPVQVHRMITRGTVEEKVAELLTRKRALADAVLS 879 >gi|229542511|ref|ZP_04431571.1| SNF2-related protein [Bacillus coagulans 36D1] gi|229326931|gb|EEN92606.1| SNF2-related protein [Bacillus coagulans 36D1] Length = 933 Score = 126 bits (318), Expect = 1e-27, Method: Composition-based stats. Identities = 34/184 (18%), Positives = 70/184 (38%), Gaps = 21/184 (11%) Query: 29 TVKCLQLANGAVYYDEEKHWKEVHDE--KIKALEVIIEK--ANAAPIIVAYHFNSDLARL 84 + QL N + +E+ + + K++ L + E ++ + + Sbjct: 736 LNRLKQLCNHPALFLKEEKPAHLLERSFKLEKLATLTEAILNTGESCLIFTQYIGMGQMI 795 Query: 85 QKAFPQGRTLD-----------KDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILV 133 ++ + LD K I+++ P+ + G GLNL N ++ Sbjct: 796 RQMMKELFGLDVPFLNGSMPKAKRDQLIRDFQNKAFPVFLLSLKAGGTGLNLT-AANHVI 854 Query: 134 FFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDL 193 + WW+ Q +R + G +R V V+ LIA T++E + L K + D Sbjct: 855 HYDRWWNPAVENQATDR-----AHRIGQQRFVHVHKLIATGTLEEKIDAMLEKKQALNDE 909 Query: 194 LLNA 197 ++ + Sbjct: 910 IIQS 913 >gi|108760346|ref|YP_630479.1| SNF2/helicase domain-containing protein [Myxococcus xanthus DK 1622] gi|108464226|gb|ABF89411.1| SNF2/helicase domain protein [Myxococcus xanthus DK 1622] Length = 1006 Score = 126 bits (318), Expect = 1e-27, Method: Composition-based stats. Identities = 36/207 (17%), Positives = 71/207 (34%), Gaps = 21/207 (10%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEV 61 Y + E+ L+ + ++ Q A + + K++AL Sbjct: 793 AIYAATREEVVSQLEAGG-SVLKALEALLRLRQAACHPALVPGQ---QAKTSSKVQALVE 848 Query: 62 IIEKA--NAAPIIVAYHFNSDLARLQKAF---------PQGRTLDKDPCTIQEWNEGKIP 110 + A + +V + S L ++ A G T ++ + P Sbjct: 849 ALGTAVEDGHKALVFSQWTSMLDLIEPALQEAGIGFIRLDGSTANRGAVAASFQDPKGPP 908 Query: 111 LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYL 170 ++ + GLNL + + WW+ Q +R + G +R V VY L Sbjct: 909 VMLISLKAGATGLNLT-AADHVFLVDPWWNPSVEAQAADR-----AHRIGQQRPVMVYRL 962 Query: 171 IAQNTIDELVLQRLRTKSTIQDLLLNA 197 ++Q T++E +L K + + L Sbjct: 963 VSQGTVEEKILTLQAKKRELFEAALGG 989 >gi|306832030|ref|ZP_07465185.1| Snf2 family protein [Streptococcus gallolyticus subsp. gallolyticus TX20005] gi|304425956|gb|EFM29073.1| Snf2 family protein [Streptococcus gallolyticus subsp. gallolyticus TX20005] Length = 1026 Score = 126 bits (318), Expect = 1e-27, Method: Composition-based stats. Identities = 39/212 (18%), Positives = 74/212 (34%), Gaps = 27/212 (12%) Query: 1 MKQYHKFQRELYCDLQGENIE--AFNSASKTVKCLQLA-NGAVYYDEEKHWKEVHDEKIK 57 + Q + +E +I S + Q+ +++ D K+ Sbjct: 808 LAQLRQM-QETIAGASDADINRRKIEILSGITRLRQICDTPSLFMDYNGE-----SGKLD 861 Query: 58 ALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQ----------GRTLDKDPCTIQEWN 105 +L ++ + N ++ F L +K + + + +N Sbjct: 862 SLRTLLTQIKENGHRALIFSQFRGMLDIAEKEMEKLGLTSYKITGSTPANARQEMTRAFN 921 Query: 106 EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 G + G GLNL G + ++ LWW+ Q I R + G K V Sbjct: 922 NGSKDTFLISLKAGGVGLNLT-GADTVILIDLWWNPAVEMQAISR-----AHRIGQKENV 975 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 VY LI + TI+E +L+ +K + +L+ Sbjct: 976 EVYRLITRGTIEEKILEMQESKKNLVTTVLDG 1007 >gi|297196538|ref|ZP_06913936.1| SNF2/RAD54 family helicase [Streptomyces pristinaespiralis ATCC 25486] gi|297153265|gb|EFH32249.1| SNF2/RAD54 family helicase [Streptomyces pristinaespiralis ATCC 25486] Length = 923 Score = 126 bits (317), Expect = 2e-27, Method: Composition-based stats. Identities = 38/209 (18%), Positives = 85/209 (40%), Gaps = 21/209 (10%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASK--TVKCLQLANG-AVYYDEEKHWKEVHDEKIKA 58 Y K +E+ ++ A + Q+ N A + ++ K++ Sbjct: 696 ALYRKHAQEVMDRIRASQGIARSGLVLKLLTGLKQICNHPAHFLKQDDTALSGRSGKLEL 755 Query: 59 LEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQ----------GRTLDKDPCTIQEWNE 106 L+ +++ A ++V + + L++ + G + + +Q + + Sbjct: 756 LDELLDTITAEGGAVLVFTQYVAMAKLLERHLRERGIGAQLLHGGTPVPRREELVQRFQD 815 Query: 107 GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVF 166 G++P+ + G GLNL + +V + WW+ Q +R + G R+V Sbjct: 816 GEVPVFLLSLKAAGTGLNLTR-ADHVVHYDRWWNPAVEAQATDR-----AYRIGQTRSVQ 869 Query: 167 VYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 V+ +IA+ TI++ + L +K + D +L Sbjct: 870 VHKMIAEGTIEDRIAALLESKKDLADAVL 898 >gi|149279882|ref|ZP_01886009.1| superfamily II DNA/RNA helicase, SNF2 family protein [Pedobacter sp. BAL39] gi|149229472|gb|EDM34864.1| superfamily II DNA/RNA helicase, SNF2 family protein [Pedobacter sp. BAL39] Length = 1139 Score = 126 bits (317), Expect = 2e-27, Method: Composition-based stats. Identities = 42/216 (19%), Positives = 84/216 (38%), Gaps = 25/216 (11%) Query: 2 KQYHKFQRELYCDLQGENI-----EAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKI 56 K Y ++RE+ L + + N +K Q+ N ++ + K+ Sbjct: 913 KVYDAYEREIRDYLTNQTDAEIASDTMNVLKGIMKLRQICNSPSLLSDD-EYYGASSAKM 971 Query: 57 KAL-EVIIEKANAAPIIVAYHFNSDLARLQKAFPQ---------GRTLDKDPCTIQEWNE 106 + L E I+ K+ I+V F L ++ + G+T ++ + ++ Sbjct: 972 EVLLEQILSKSPQHKILVFSQFVGMLNLIRAELEKRQVSFAMLTGQTRNRQAVVDRFQDD 1031 Query: 107 GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVF 166 I + + G GLNL + + WW+ Q I+R + G + V Sbjct: 1032 ESIRVFLISLKAGGVGLNLTQ-ADYVYIVDPWWNPAVENQAIDR-----TYRIGQHKNVV 1085 Query: 167 VYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKET 202 LI +T++E +++ K DL+ + +K +T Sbjct: 1086 AVRLICPDTVEEKIMEMQEHKR---DLVTDLVKTDT 1118 >gi|145298464|ref|YP_001141305.1| SWI/SNF family helicase [Aeromonas salmonicida subsp. salmonicida A449] gi|142851236|gb|ABO89557.1| SWI/SNF family helicase [Aeromonas salmonicida subsp. salmonicida A449] Length = 1280 Score = 126 bits (317), Expect = 2e-27, Method: Composition-based stats. Identities = 40/209 (19%), Positives = 79/209 (37%), Gaps = 22/209 (10%) Query: 2 KQYHKFQRELYCDLQGENIEAF-NSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 + Y +RE+ +Q + A + S + +L E W + K+ Sbjct: 1063 QLYEATRREVVQQVQSADGRALMHVLSGLTRLRRLCCSPELVMPE--WSQTSS-KLDEAM 1119 Query: 61 VIIEKA--NAAPIIVAYHFNSDLARLQKAFPQGR----------TLDKDPCTIQEWNEGK 108 ++++A N ++V F L+ L+ Q + + +I + Sbjct: 1120 ALLDEAIGNGHRVLVFSQFVDLLSLLRARIEQKKWDYCYLDGGCSAKSRQDSILRFRHEP 1179 Query: 109 IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVY 168 +PL + G GLNL + ++ WW+ Q +R + G + V VY Sbjct: 1180 VPLFLISLKAGGTGLNLTQ-ADTVLHLDPWWNPAVEDQASDR-----AHRMGQTQPVTVY 1233 Query: 169 YLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 L+ + T++E ++ K + D LL+ Sbjct: 1234 RLVCEQTVEEKIVALHDEKRALADGLLSG 1262 >gi|212640482|ref|YP_002317002.1| SWF/SNF family helicase [Anoxybacillus flavithermus WK1] gi|212561962|gb|ACJ35017.1| SWF/SNF family helicase [Anoxybacillus flavithermus WK1] Length = 898 Score = 126 bits (317), Expect = 2e-27, Method: Composition-based stats. Identities = 42/212 (19%), Positives = 78/212 (36%), Gaps = 23/212 (10%) Query: 3 QYHKFQRELYCDLQGENIEAFNSASK--TVKCLQLANGAVYYDEEKHWKEV--HDEKIKA 58 Y + ++ L+ + A QL N Y +EKH K++ K++ Sbjct: 674 LYEQIVQQSLEKLEQVDGFARRGIILQMLNSLKQLCNHPALYLKEKHPKQIVERSHKVEK 733 Query: 59 LEVIIEK--ANAAPIIVAYHFNSDLARLQKA----------FPQGRT-LDKDPCTIQEWN 105 L ++E+ N ++ + +Q F G T I+++ Sbjct: 734 LLELVEQIRENGESCLIFTQYIQMGEMIQHLLSTHLKETVVFLNGSTPKQTRDEMIEQFQ 793 Query: 106 EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 G+ + + G GLNL N ++ F WW+ Q +R + G + V Sbjct: 794 NGQFHIFILSLKAGGTGLNLT-AANHVIHFDRWWNPAVENQATDR-----AYRIGQTKFV 847 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 V+ I TI+E + L K + + L+ + Sbjct: 848 HVHKFITTGTIEEKIDDMLEKKQALNEQLIQS 879 >gi|19704495|ref|NP_604057.1| SWF/SNF family helicase [Fusobacterium nucleatum subsp. nucleatum ATCC 25586] gi|19714769|gb|AAL95356.1| SWF/SNF family helicase [Fusobacterium nucleatum subsp. nucleatum ATCC 25586] Length = 1089 Score = 126 bits (317), Expect = 2e-27, Method: Composition-based stats. Identities = 43/204 (21%), Positives = 73/204 (35%), Gaps = 25/204 (12%) Query: 10 ELYCDLQGENIEAFNSASKTVKCLQLANGA--VYYDEEKHWKEVHDEKIKALEVIIEKA- 66 E N + K Q+ +Y D KI A +IEK+ Sbjct: 879 ETLAQNIDVNTNKIEVLAMLTKLRQICIDPRLLYED-----VSSSSSKINACIELIEKSI 933 Query: 67 -NAAPIIVAYHFNSDLAR---------LQKAFPQGRTLD-KDPCTIQEWNEGKIPLLFAH 115 N I++ F + L + G T K ++ + +PL Sbjct: 934 ENNQKILLFSSFTTVLDLVAQECDNLSIPYFMLTGETNKVKRKEMVENFQNEAVPLFLIS 993 Query: 116 PASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNT 175 + G GLNL ++++ WW++ Q +R + G + V V+ LI +NT Sbjct: 994 LKAGGTGLNLTK-ASVVIHLDPWWNISAQNQATDR-----AHRIGQEDTVQVFNLITKNT 1047 Query: 176 IDELVLQRLRTKSTIQDLLLNALK 199 I+E +L K + D+ + K Sbjct: 1048 IEEKILNLQSKKKELSDIFVENSK 1071 >gi|37360298|dbj|BAC98127.1| mKIAA1259 protein [Mus musculus] Length = 1196 Score = 126 bits (317), Expect = 2e-27, Method: Composition-based stats. Identities = 34/176 (19%), Positives = 74/176 (42%), Gaps = 21/176 (11%) Query: 44 EEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRT-------- 93 K K+ AL+V++ + + +++ + L++ + Sbjct: 731 PGKESLITDSGKLYALDVLLTRLKSQGHRVLIYSQMTRMIDLLEEYMVYRKHTYMRLDGS 790 Query: 94 --LDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 + + + ++ I + + G G+NL + ++F+ W+ QQ ++R Sbjct: 791 SKISERRDMVADFQTRNDIFVFLLSTRAGGLGINLT-AADTVIFYDSDWNPTVDQQAMDR 849 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA--LKKETIH 204 + G + V VY LI + TI+E +LQR + KS IQ ++++ K +T+ Sbjct: 850 -----AHRLGQTKQVTVYRLICKGTIEERILQRAKEKSEIQRMVISGGNFKPDTLK 900 >gi|188591304|ref|YP_001795904.1| DNA/RNA helicase [Cupriavidus taiwanensis LMG 19424] gi|170938198|emb|CAP63184.1| putative DNA/RNA Helicase [Cupriavidus taiwanensis LMG 19424] Length = 997 Score = 126 bits (317), Expect = 2e-27, Method: Composition-based stats. Identities = 35/190 (18%), Positives = 68/190 (35%), Gaps = 22/190 (11%) Query: 24 NSASKTVKCLQLANGAVYYDEEKHWKEVHD----EKIKALEVIIE--KANAAPIIVAYHF 77 + ++ ++ + A E + K++A + A+ +V F Sbjct: 790 HVLAQLMRLRRAACDPRLVTPEVAAQLSDQGGEGAKVRAFVELASGLAASGHKTLVFSQF 849 Query: 78 NSDLARLQKAFPQGRTL----------DKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQY 127 L L++ + + + + G+ + + G GLNL Sbjct: 850 VDFLQLLRQGLERAGLALQYLDGATPAAERTRRVAAFQAGEGDVFLISLKAGGFGLNLT- 908 Query: 128 GGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTK 187 + ++ WW+ Q + R + G +R V VY LI TI+E +++ R K Sbjct: 909 AADYVIVADPWWNPAAEDQAMGR-----AHRIGQRRPVTVYRLINAGTIEERIVELHRDK 963 Query: 188 STIQDLLLNA 197 + D LL A Sbjct: 964 RALADGLLEA 973 >gi|108885078|ref|NP_072678.2| SNF2 family helicase putative [Mycoplasma genitalium G37] gi|94730430|sp|P47264|Y018_MYCGE RecName: Full=Uncharacterized ATP-dependent helicase MG018 gi|84626126|gb|AAC71234.2| helicase SNF2 family, putative [Mycoplasma genitalium G37] gi|166078676|gb|ABY79294.1| helicase SNF2 family, putative [synthetic Mycoplasma genitalium JCVI-1.0] Length = 1031 Score = 126 bits (316), Expect = 2e-27, Method: Composition-based stats. Identities = 46/202 (22%), Positives = 86/202 (42%), Gaps = 21/202 (10%) Query: 2 KQYHKFQRELYCDLQGENI-EAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 K Y K + + +++ + A N S +K + + + D + + E + + AL Sbjct: 813 KLYDKQKTDGLKEIKESDAKNALNILSLILKLRHICS--LVKDNDVNDFEDNSKANAALN 870 Query: 61 VIIEKA-NAAPIIVAYHFNSDLARLQK----------AFPQGRTLDKDPCTIQEWNEGKI 109 +I E N +I+ F + ++ F +T+ IQ++N K Sbjct: 871 IIYEALENKRKVILFTQFLDVIDCFKQTLKNQKIDHLVFDGRKTVKNRNTIIQKFNSAKE 930 Query: 110 P-LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVY 168 P ++ A + G G+NL +++ F +WW+ Q +R + G + V VY Sbjct: 931 PCVMLASLKAGGVGINLT-AAEVVIHFDVWWNSAVENQATDR-----AHRIGQSKTVQVY 984 Query: 169 YLIAQNTIDELVLQRLRTKSTI 190 +IA+NTI+E V Q K + Sbjct: 985 RIIAKNTIEERVCQVQNQKQEL 1006 >gi|254975778|ref|ZP_05272250.1| putative helicase [Clostridium difficile QCD-66c26] gi|255093165|ref|ZP_05322643.1| putative helicase [Clostridium difficile CIP 107932] gi|255314907|ref|ZP_05356490.1| putative helicase [Clostridium difficile QCD-76w55] gi|255517581|ref|ZP_05385257.1| putative helicase [Clostridium difficile QCD-97b34] gi|255650692|ref|ZP_05397594.1| putative helicase [Clostridium difficile QCD-37x79] gi|260683779|ref|YP_003215064.1| putative helicase [Clostridium difficile CD196] gi|260687439|ref|YP_003218573.1| putative helicase [Clostridium difficile R20291] gi|260209942|emb|CBA63920.1| putative helicase [Clostridium difficile CD196] gi|260213456|emb|CBE05136.1| putative helicase [Clostridium difficile R20291] Length = 1059 Score = 126 bits (316), Expect = 2e-27, Method: Composition-based stats. Identities = 41/211 (19%), Positives = 83/211 (39%), Gaps = 24/211 (11%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSA--SKTVKCLQLA--NGAVYYDEEKHWKEVHDEKIK 57 K Y + +++ ++ +N++ S K QL V D K ++ ++ Sbjct: 837 KIYSVYSKDIQDKMKDKNLKKDKIVIFSYLTKLRQLCLDPSIVVKDYNKKSSKIETC-LE 895 Query: 58 ALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTL----------DKDPCTIQEWNEG 107 L I + + I++ F S L + K + + + + E+N Sbjct: 896 ILRDSINENH--KILLFSQFTSVLKNISKELDKYKIKYHYIDGKTNAKERLELVDEFNNS 953 Query: 108 -KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVF 166 + + G GLNL ++++ F WW+ Q +R + G K +V Sbjct: 954 MDKKVFLISLKAGGTGLNLT-SADMVIHFDPWWNPSVENQASDR-----AHRFGQKNSVQ 1007 Query: 167 VYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 V LIA+ TI+E +++ +K + + +N Sbjct: 1008 VIKLIAKGTIEEKIIKLQESKKELINQFING 1038 >gi|160915633|ref|ZP_02077841.1| hypothetical protein EUBDOL_01640 [Eubacterium dolichum DSM 3991] gi|158432109|gb|EDP10398.1| hypothetical protein EUBDOL_01640 [Eubacterium dolichum DSM 3991] Length = 1102 Score = 126 bits (316), Expect = 2e-27, Method: Composition-based stats. Identities = 34/203 (16%), Positives = 73/203 (35%), Gaps = 21/203 (10%) Query: 6 KFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIE- 64 + REL + ++ + + K QL E K+KA +I+ Sbjct: 889 QVNRELSQMVNMQSTDKITILAMLTKLRQLCCEPRLVFEN---IHEPSSKLKACIHLIQT 945 Query: 65 -KANAAPIIVAYHFNSDLARLQKAFPQ----------GRTLDKDPCTIQEWNEGKIPLLF 113 K N +++ F S L + + ++ ++ + + Sbjct: 946 LKENKQKVLLFSSFTSMLELIADELYKEGISYYILTGATNKEERRELVERFQNDSTTVFL 1005 Query: 114 AHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQ 173 + G GLNL ++ + WW+ Q +R + G ++ V V+ L+ + Sbjct: 1006 ISLKAGGTGLNLT-SAEAVIHYDPWWNQSAQNQATDR-----AYRIGQRKKVQVFKLVMK 1059 Query: 174 NTIDELVLQRLRTKSTIQDLLLN 196 N+I+E + + K + D+ + Sbjct: 1060 NSIEEKIQKLQLMKKELADMFVE 1082 >gi|148379559|ref|YP_001254100.1| helicase, Snf2 family [Clostridium botulinum A str. ATCC 3502] gi|153931492|ref|YP_001383937.1| SNF2 family helicase [Clostridium botulinum A str. ATCC 19397] gi|153937278|ref|YP_001387483.1| SNF2 family helicase [Clostridium botulinum A str. Hall] gi|148289043|emb|CAL83133.1| putative helicase [Clostridium botulinum A str. ATCC 3502] gi|152927536|gb|ABS33036.1| helicase, Snf2 family [Clostridium botulinum A str. ATCC 19397] gi|152933192|gb|ABS38691.1| helicase, Snf2 family [Clostridium botulinum A str. Hall] Length = 1097 Score = 126 bits (316), Expect = 2e-27, Method: Composition-based stats. Identities = 38/210 (18%), Positives = 82/210 (39%), Gaps = 24/210 (11%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLA-NGAVYYDEEKHWKEVHDEKIKALE 60 + Y + + + L+ + S + QL + ++ DE K K++ Sbjct: 877 RIYKAYMKSIKEKLKNNKEDKITIFSYLTRLRQLCLDPSIIIDEYK----GGSSKLRIAM 932 Query: 61 VIIEKA--NAAPIIVAYHFNSDLARLQKAFPQ---------GRTLDKDP-CTIQEWNEGK 108 ++++ I++ F S L + K + G T + + ++N+ Sbjct: 933 ELVQEGVDEGKKILLFSQFTSVLKNISKLLKKECIEYFYLDGSTNASERIKLVDKFNKNS 992 Query: 109 -IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFV 167 + + + G GLNL N+++ F WW+ Q +R + G K V V Sbjct: 993 HVKIFLISLKAGGTGLNLT-SANLVIHFDPWWNPAVEDQATDR-----AHRIGQKNLVQV 1046 Query: 168 YYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 L+ + TI+E ++ K + + ++N+ Sbjct: 1047 IKLVCKGTIEEKIIMLQEDKKELINNVMNS 1076 >gi|74177549|dbj|BAB31000.3| unnamed protein product [Mus musculus] Length = 559 Score = 126 bits (316), Expect = 2e-27, Method: Composition-based stats. Identities = 34/176 (19%), Positives = 74/176 (42%), Gaps = 21/176 (11%) Query: 44 EEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRT-------- 93 K K+ AL+V++ + + +++ + L++ + Sbjct: 345 PGKESLITDSGKLYALDVLLTRLKSQGHRVLIYSQMTRMIDLLEEYMVYRKHTYMRLDGS 404 Query: 94 --LDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 + + + ++ I + + G G+NL + ++F+ W+ QQ ++R Sbjct: 405 SKISERRDMVADFQTRNDIFVFLLSTRAGGLGINLT-AADTVIFYDSDWNPTVDQQAMDR 463 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA--LKKETIH 204 + G + V VY LI + TI+E +LQR + KS IQ ++++ K +T+ Sbjct: 464 -----AHRLGQTKQVTVYRLICKGTIEERILQRAKEKSEIQRMVISGGNFKPDTLK 514 >gi|255101318|ref|ZP_05330295.1| putative helicase [Clostridium difficile QCD-63q42] Length = 1059 Score = 126 bits (316), Expect = 2e-27, Method: Composition-based stats. Identities = 41/211 (19%), Positives = 83/211 (39%), Gaps = 24/211 (11%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSA--SKTVKCLQLA--NGAVYYDEEKHWKEVHDEKIK 57 K Y + +++ ++ +N++ S K QL V D K ++ ++ Sbjct: 837 KIYSVYSKDIQDKMKDKNLKKDKIVIFSYLTKLRQLCLDPSIVVKDYNKKSSKIETC-LE 895 Query: 58 ALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTL----------DKDPCTIQEWNEG 107 L I + + I++ F S L + K + + + + E+N Sbjct: 896 ILRDSINENH--KILLFSQFTSVLKNISKELDKYKIKYHYIDGKTNAKERLELVDEFNNS 953 Query: 108 -KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVF 166 + + G GLNL ++++ F WW+ Q +R + G K +V Sbjct: 954 MDKKVFLISLKAGGTGLNLT-SADMVIHFDPWWNPSVENQASDR-----AHRFGQKNSVQ 1007 Query: 167 VYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 V LIA+ TI+E +++ +K + + +N Sbjct: 1008 VIKLIAKGTIEEKIIKLQESKKELINQFING 1038 >gi|115372534|ref|ZP_01459842.1| helicase [Stigmatella aurantiaca DW4/3-1] gi|310819012|ref|YP_003951370.1| swi/snf family helicase [Stigmatella aurantiaca DW4/3-1] gi|115370496|gb|EAU69423.1| helicase [Stigmatella aurantiaca DW4/3-1] gi|309392084|gb|ADO69543.1| SWI/SNF family helicase [Stigmatella aurantiaca DW4/3-1] Length = 1000 Score = 126 bits (316), Expect = 2e-27, Method: Composition-based stats. Identities = 37/206 (17%), Positives = 69/206 (33%), Gaps = 21/206 (10%) Query: 3 QYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVI 62 Y + E+ L+ + ++ Q A + + K+ AL Sbjct: 788 VYAATREEVVSQLEEGG-SVLKALEALLRLRQAACHPALVPGQ---QAKTSSKVLALIEA 843 Query: 63 IEKA--NAAPIIVAYHFNSDLARLQKAF---------PQGRTLDKDPCTIQEWNEGKIPL 111 + A + +V + S L ++ A G T D+ P+ Sbjct: 844 LGTAVEDGHKALVFSQWTSMLDLIEPALREAGIGFVRLDGGTADRGGVAASFQAPEGPPV 903 Query: 112 LFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLI 171 + + GLNL + + WW+ Q +R + G +R V VY L+ Sbjct: 904 MLISLKAGATGLNLT-AADHVFLVDPWWNPSVEAQAADR-----AHRIGQQRPVMVYRLV 957 Query: 172 AQNTIDELVLQRLRTKSTIQDLLLNA 197 +Q T++E +L K + + L Sbjct: 958 SQGTVEEKILTLQEKKRALFEAALGG 983 >gi|126699796|ref|YP_001088693.1| putative helicase [Clostridium difficile 630] gi|115251233|emb|CAJ69064.1| putative DEAD-like helicase [Clostridium difficile] Length = 1062 Score = 126 bits (316), Expect = 2e-27, Method: Composition-based stats. Identities = 41/211 (19%), Positives = 83/211 (39%), Gaps = 24/211 (11%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSA--SKTVKCLQLA--NGAVYYDEEKHWKEVHDEKIK 57 K Y + +++ ++ +N++ S K QL V D K ++ ++ Sbjct: 840 KIYSVYSKDIQDKMKDKNLKKDKIVIFSYLTKLRQLCLDPSIVVKDYNKKSSKIETC-LE 898 Query: 58 ALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTL----------DKDPCTIQEWNEG 107 L I + + I++ F S L + K + + + + E+N Sbjct: 899 ILRDSINENH--KILLFSQFTSVLKNISKELDKYKIKYHYIDGKTNAKERLELVDEFNNS 956 Query: 108 -KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVF 166 + + G GLNL ++++ F WW+ Q +R + G K +V Sbjct: 957 MDKKVFLISLKAGGTGLNLT-SADMVIHFDPWWNPSVENQASDR-----AHRFGQKNSVQ 1010 Query: 167 VYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 V LIA+ TI+E +++ +K + + +N Sbjct: 1011 VIKLIAKGTIEEKIIKLQESKKELINQFING 1041 >gi|255307194|ref|ZP_05351365.1| putative helicase [Clostridium difficile ATCC 43255] Length = 1059 Score = 126 bits (316), Expect = 2e-27, Method: Composition-based stats. Identities = 41/211 (19%), Positives = 83/211 (39%), Gaps = 24/211 (11%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSA--SKTVKCLQLA--NGAVYYDEEKHWKEVHDEKIK 57 K Y + +++ ++ +N++ S K QL V D K ++ ++ Sbjct: 837 KIYSVYSKDIQDKMKDKNLKKDKIVIFSYLTKLRQLCLDPSIVVKDYNKKSSKIETC-LE 895 Query: 58 ALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTL----------DKDPCTIQEWNEG 107 L I + + I++ F S L + K + + + + E+N Sbjct: 896 ILRDSINENH--KILLFSQFTSVLKNISKELDKYKIKYHYIDGKTNAKERLELVDEFNNS 953 Query: 108 -KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVF 166 + + G GLNL ++++ F WW+ Q +R + G K +V Sbjct: 954 MDKKVFLISLKAGGTGLNLT-SADMVIHFDPWWNPSVENQASDR-----AHRFGQKNSVQ 1007 Query: 167 VYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 V LIA+ TI+E +++ +K + + +N Sbjct: 1008 VIKLIAKGTIEEKIIKLQESKKELINQFING 1038 >gi|32141133|ref|NP_733524.1| helicase [Streptomyces coelicolor A3(2)] gi|24413742|emb|CAD55164.1| putative helicase [Streptomyces coelicolor A3(2)] Length = 890 Score = 126 bits (316), Expect = 2e-27, Method: Composition-based stats. Identities = 40/213 (18%), Positives = 82/213 (38%), Gaps = 21/213 (9%) Query: 3 QYHKFQRELYCDLQGENIEAFNSA--SKTVKCLQLANG-AVYYDEEKHWKEVHDEKIKAL 59 Y RE ++ G + A Q+ N A + E++ K++ L Sbjct: 663 LYEAVVREALAEIAGADHMARRGMIVKLLTNLKQICNHPAQFLKEDRPKITGRSGKLELL 722 Query: 60 EVIIEK--ANAAPIIVAYHFNSDLARLQKAFP----------QGRTLDKDPCTIQEWNEG 107 + +++ + A ++V + L++ G ++ ++ + +G Sbjct: 723 DELLDTILSEQASVLVFTQYVQMARLLEQHLAARGVSSLFLHGGTSVTARESLVRRFQDG 782 Query: 108 KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFV 167 P+ + G GLNL + +V + WW+ Q +R + G R V V Sbjct: 783 DAPVFLLSLKAAGTGLNLTRAEH-VVHYDRWWNPAVEAQATDR-----AYRIGQTRPVQV 836 Query: 168 YYLIAQNTIDELVLQRLRTKSTIQDLLLNALKK 200 + LIA+ TI++ + L K + D +L + + Sbjct: 837 HRLIAEGTIEDRIAALLNRKRELADAVLGSGEA 869 >gi|254519060|ref|ZP_05131116.1| helicase [Clostridium sp. 7_2_43FAA] gi|226912809|gb|EEH98010.1| helicase [Clostridium sp. 7_2_43FAA] Length = 1084 Score = 126 bits (316), Expect = 2e-27, Method: Composition-based stats. Identities = 41/184 (22%), Positives = 74/184 (40%), Gaps = 23/184 (12%) Query: 26 ASKTVKCLQLA-NGAVYYDEEKHWKEVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDL- 81 S K QL + +V ++ K+ AL I+++ I+V F S L Sbjct: 888 LSYITKLRQLCLDPSVLIND----YVGTSGKVDALIEILQQGIEEGHKILVFSQFTSVLK 943 Query: 82 --------ARLQKAFPQGRTL-DKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNIL 132 + ++ G +K + E+NEG + + G GLNL +I+ Sbjct: 944 NIASKLRSEHILFSYLDGSIPSEKRLELVNEFNEGINSVFLISLKAGGTGLNLT-SADIV 1002 Query: 133 VFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQD 192 + F WW+ Q +R + G V V LIA+N+I+E ++ K + + Sbjct: 1003 IHFDPWWNPAVEDQATDR-----AHRFGQTNIVEVIKLIARNSIEEKIIDLQDEKRKLIE 1057 Query: 193 LLLN 196 +++ Sbjct: 1058 KIID 1061 >gi|170761655|ref|YP_001787000.1| SNF2 family helicase [Clostridium botulinum A3 str. Loch Maree] gi|169408644|gb|ACA57055.1| helicase, Snf2 family [Clostridium botulinum A3 str. Loch Maree] Length = 1097 Score = 126 bits (316), Expect = 2e-27, Method: Composition-based stats. Identities = 38/210 (18%), Positives = 82/210 (39%), Gaps = 24/210 (11%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLA-NGAVYYDEEKHWKEVHDEKIKALE 60 + Y + + + L+ + S + QL + ++ DE K K++ Sbjct: 877 RIYKAYMKSIKEKLKNNKEDKITIFSYLTRLRQLCLDPSIIIDEYK----GGSSKLRIAM 932 Query: 61 VIIEKA--NAAPIIVAYHFNSDLARLQKAFPQ---------GRTLDKDP-CTIQEWNEGK 108 ++++ I++ F S L + K + G T + + ++N+ Sbjct: 933 ELVQEGVDEGKKILLFSQFTSVLKNISKLLEKECIEYFYLDGSTNASERIKLVNKFNKSS 992 Query: 109 -IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFV 167 + + + G GLNL N+++ F WW+ Q +R + G K V V Sbjct: 993 HVKIFLISLKAGGTGLNLT-SANLVIHFDPWWNPAIEDQATDR-----AHRIGQKNLVQV 1046 Query: 168 YYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 L+ + TI+E ++ K + + ++N+ Sbjct: 1047 IKLVCKGTIEEKIITLQEDKKELINDVMNS 1076 >gi|153940180|ref|YP_001390936.1| SNF2 family helicase [Clostridium botulinum F str. Langeland] gi|152936076|gb|ABS41574.1| helicase, Snf2 family [Clostridium botulinum F str. Langeland] gi|295318999|gb|ADF99376.1| helicase, Snf2 family [Clostridium botulinum F str. 230613] Length = 1097 Score = 126 bits (316), Expect = 2e-27, Method: Composition-based stats. Identities = 37/210 (17%), Positives = 82/210 (39%), Gaps = 24/210 (11%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLA-NGAVYYDEEKHWKEVHDEKIKALE 60 + Y + + + L+ + S + QL + ++ DE K K++ Sbjct: 877 RIYKAYMKSIKEKLKNNKEDKITIFSYLTRLRQLCLDPSIIIDEYK----GGSSKLRIAM 932 Query: 61 VIIEKA--NAAPIIVAYHFNSDLARLQKAFPQ---------GRTLDKDP-CTIQEWNEGK 108 ++++ I++ F S L + + + G T + + ++N+ Sbjct: 933 ELVQEGVDEGKKILLFSQFTSVLKNISRLLKKECIEYFYLDGSTNASERIKLVDKFNKNS 992 Query: 109 -IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFV 167 + + + G GLNL N+++ F WW+ Q +R + G K V V Sbjct: 993 HVKVFLISLKAGGTGLNLT-SANLVIHFDPWWNPAVEDQATDR-----AHRIGQKNLVQV 1046 Query: 168 YYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 L+ + TI+E ++ K + + ++N+ Sbjct: 1047 IKLVCKGTIEEKIIMLQEDKKELINNVMNS 1076 >gi|313851062|ref|NP_001186586.1| putative DNA helicase INO80 complex homolog 1 [Gallus gallus] Length = 1560 Score = 126 bits (316), Expect = 2e-27, Method: Composition-based stats. Identities = 34/176 (19%), Positives = 73/176 (41%), Gaps = 21/176 (11%) Query: 44 EEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQ----------- 90 +K K+ AL++++ + + +++ + L++ Sbjct: 1095 PDKESLITDSGKLHALDLLLTRLKSQGHRVLIYSQMTRMIDLLEEYMVYRKHTYMRLDGS 1154 Query: 91 GRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 + ++ N I + + G G+NL + ++F+ W+ QQ ++R Sbjct: 1155 SKISERRDMVADFQNRNDIFVFLLSTRAGGLGINLT-AADTVIFYDSDWNPTVDQQAMDR 1213 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA--LKKETIH 204 + G + V VY LI + TI+E +LQR + KS IQ ++++ K +T+ Sbjct: 1214 -----AHRLGQTKQVTVYRLICKGTIEERILQRAKEKSEIQRMVISGGNFKPDTLK 1264 >gi|293358005|ref|XP_230473.5| PREDICTED: yeast INO80-like protein [Rattus norvegicus] Length = 1559 Score = 126 bits (316), Expect = 3e-27, Method: Composition-based stats. Identities = 33/176 (18%), Positives = 73/176 (41%), Gaps = 21/176 (11%) Query: 44 EEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAF----------PQG 91 K K+ AL++++ + + +++ + L++ Sbjct: 1094 PGKESLITDSGKLYALDILLTRLKSQGHRVLIYSQMTRMIDLLEEYMVYRKHTYMRLDGS 1153 Query: 92 RTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 + + + ++ I + + G G+NL + ++F+ W+ QQ ++R Sbjct: 1154 SKISERRDMVADFQTRNDIFVFLLSTRAGGLGINLT-AADTVIFYDSDWNPTVDQQAMDR 1212 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA--LKKETIH 204 + G + V VY LI + TI+E +LQR + KS IQ ++++ K +T+ Sbjct: 1213 -----AHRLGQTKQVTVYRLICKGTIEERILQRAKEKSEIQRMVISGGNFKPDTLK 1263 >gi|296450398|ref|ZP_06892154.1| SNF2/RAD54 family helicase [Clostridium difficile NAP08] gi|296879479|ref|ZP_06903473.1| SNF2/RAD54 family helicase [Clostridium difficile NAP07] gi|296260659|gb|EFH07498.1| SNF2/RAD54 family helicase [Clostridium difficile NAP08] gi|296429625|gb|EFH15478.1| SNF2/RAD54 family helicase [Clostridium difficile NAP07] Length = 1062 Score = 125 bits (315), Expect = 3e-27, Method: Composition-based stats. Identities = 41/211 (19%), Positives = 83/211 (39%), Gaps = 24/211 (11%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSA--SKTVKCLQLA--NGAVYYDEEKHWKEVHDEKIK 57 K Y + +++ ++ +N++ S K QL V D K ++ ++ Sbjct: 840 KIYSVYSKDIQDKIKDKNLKKDKIVIFSYLTKLRQLCLDPSIVVKDYNKKSSKIETC-LE 898 Query: 58 ALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTL----------DKDPCTIQEWNEG 107 L I + + I++ F S L + K + + + + E+N Sbjct: 899 ILRDSINENH--KILLFSQFTSVLKNISKELDKYKIKYHYIDGKTNAKERLELVDEFNNS 956 Query: 108 -KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVF 166 + + G GLNL ++++ F WW+ Q +R + G K +V Sbjct: 957 IDKKVFLISLKAGGTGLNLT-SADMVIHFDPWWNPSVENQASDR-----AHRFGQKNSVQ 1010 Query: 167 VYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 V LIA+ TI+E +++ +K + + +N Sbjct: 1011 VIKLIAKGTIEEKIIKLQESKKELINQFING 1041 >gi|187779742|ref|ZP_02996215.1| hypothetical protein CLOSPO_03338 [Clostridium sporogenes ATCC 15579] gi|187773367|gb|EDU37169.1| hypothetical protein CLOSPO_03338 [Clostridium sporogenes ATCC 15579] Length = 1081 Score = 125 bits (315), Expect = 3e-27, Method: Composition-based stats. Identities = 35/209 (16%), Positives = 76/209 (36%), Gaps = 22/209 (10%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEV 61 + Y + + + L+ + S + QL +E + K++ Sbjct: 861 RIYKAYMKSIKEKLKNNKEDKITIFSYLTRLRQLCLDPSLIIDE---YKGGSSKLRIAME 917 Query: 62 IIEKA--NAAPIIVAYHFNSDLARLQKAFPQGRT----------LDKDPCTIQEWN-EGK 108 ++++ I++ F S L + K + + + E+N Sbjct: 918 LVQEGVDEGKKILLFSQFTSVLKNISKLLEKEGIEYFYLDGSTNASERIKLVNEFNKNSN 977 Query: 109 IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVY 168 + + + G GLNL N+++ F WW+ Q +R + G K V V Sbjct: 978 VKVFLISLKAGGTGLNLT-SANLVIHFDPWWNPAVEDQATDR-----AHRIGQKNLVQVI 1031 Query: 169 YLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 L+ + TI+E ++ K + + ++N+ Sbjct: 1032 KLVCKGTIEEKIIMLQDDKKELINNVMNS 1060 >gi|32470671|ref|NP_863664.1| helicase [Rhodopirellula baltica SH 1] gi|32442816|emb|CAD71334.1| helicase [Rhodopirellula baltica SH 1] Length = 1176 Score = 125 bits (315), Expect = 3e-27, Method: Composition-based stats. Identities = 42/215 (19%), Positives = 75/215 (34%), Gaps = 28/215 (13%) Query: 2 KQYHKFQRELYCDLQGENIEAFN-------SASKTVKCLQLANGAVYYDEEKHWKEVHDE 54 K Y + +L + + S + QLA + WK Sbjct: 950 KLYEDARLAALAELTAGGGAPSHEGRRRIQTLSWLTRLRQLACHPSLVEPS--WK-GTSS 1006 Query: 55 KIKALEVIIEKA--NAAPIIVAYHF-NS--------DLARLQKAFPQGRTLDKDPCT-IQ 102 K++ ++E+ +V F D + + G T + + Sbjct: 1007 KLQLFLSLVEELREGDHRALVFSQFVKHLSVVRAALDERGISYQYLDGATPSHERQRRVD 1066 Query: 103 EWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFK 162 + G+ L + G GLNL + ++ WW+ Q +R + G + Sbjct: 1067 AFQNGEGDLFLISLKAGGTGLNLT-AADYVLHLDPWWNPAVEDQATDR-----AHRIGQE 1120 Query: 163 RAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 RAV VY L+A+ TI+E +LQ K + +L+ Sbjct: 1121 RAVTVYRLVAERTIEEQILQLHADKRELVAGILDG 1155 >gi|322805910|emb|CBZ03475.1| swf/SNF family helicase [Clostridium botulinum H04402 065] Length = 424 Score = 125 bits (315), Expect = 3e-27, Method: Composition-based stats. Identities = 39/210 (18%), Positives = 82/210 (39%), Gaps = 24/210 (11%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLA-NGAVYYDEEKHWKEVHDEKIKALE 60 + Y + + + L+ + S + QL + ++ DE K K++ Sbjct: 204 RIYKVYMKSIKEKLKNNKEDKITIFSYLTRLRQLCLDPSIIIDEYK----GGSSKLRVAM 259 Query: 61 VIIEKA--NAAPIIVAYHFNSDLARLQKAFPQ---------GRTLDKDP-CTIQEWNEGK 108 ++++ I++ F S L + K + G T + + E+N+ Sbjct: 260 ELVQEGVDEGKKILLFSQFTSVLKNISKLLKKECIEYFYLDGSTNASERIKLVNEFNKNS 319 Query: 109 -IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFV 167 + + + G GLNL N+++ F WW+ Q +R + G K V V Sbjct: 320 HVKVFLISLKAGGTGLNLT-SANLVIHFDPWWNPAVEDQATDR-----AHRIGQKNLVQV 373 Query: 168 YYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 L+ + TI+E ++ K + + ++N+ Sbjct: 374 IKLVCKGTIEEKIIMLQEDKKELINNVMNS 403 >gi|109470653|ref|XP_001080838.1| PREDICTED: yeast INO80-like protein-like [Rattus norvegicus] Length = 1559 Score = 125 bits (315), Expect = 3e-27, Method: Composition-based stats. Identities = 33/176 (18%), Positives = 73/176 (41%), Gaps = 21/176 (11%) Query: 44 EEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAF----------PQG 91 K K+ AL++++ + + +++ + L++ Sbjct: 1094 PGKESLITDSGKLYALDILLTRLKSQGHRVLIYSQMTRMIDLLEEYMVYRKHTYMRLDGS 1153 Query: 92 RTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 + + + ++ I + + G G+NL + ++F+ W+ QQ ++R Sbjct: 1154 SKISERRDMVADFQTRNDIFVFLLSTRAGGLGINLT-AADTVIFYDSDWNPTVDQQAMDR 1212 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA--LKKETIH 204 + G + V VY LI + TI+E +LQR + KS IQ ++++ K +T+ Sbjct: 1213 -----AHRLGQTKQVTVYRLICKGTIEERILQRAKEKSEIQRMVISGGNFKPDTLK 1263 >gi|327538183|gb|EGF24865.1| SWF/SNF family helicase [Rhodopirellula baltica WH47] Length = 966 Score = 125 bits (315), Expect = 3e-27, Method: Composition-based stats. Identities = 39/185 (21%), Positives = 69/185 (37%), Gaps = 21/185 (11%) Query: 25 SASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKA--NAAPIIVAYHF-NS-- 79 + S + QLA + WK K++ ++E+ +V F Sbjct: 770 TLSWLTRLRQLACHPSLVEPS--WK-GTSSKLQLFLSLVEELREGDHRALVFSQFVKHLS 826 Query: 80 ------DLARLQKAFPQGRTLDKDPCT-IQEWNEGKIPLLFAHPASCGHGLNLQYGGNIL 132 D + + G T + + + G+ L + G GLNL + + Sbjct: 827 VVRAALDERGISYQYLDGATPSHERQRRVDAFQNGEGDLFLISLKAGGTGLNLT-AADYV 885 Query: 133 VFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQD 192 + WW+ Q +R + G +RAV VY L+A+ TI+E +LQ K + Sbjct: 886 LHLDPWWNPAVEDQATDR-----AHRIGQERAVTVYRLVAERTIEEQILQLHADKRELVA 940 Query: 193 LLLNA 197 +L+ Sbjct: 941 GILDG 945 >gi|312891015|ref|ZP_07750539.1| SNF2-related protein [Mucilaginibacter paludis DSM 18603] gi|311296482|gb|EFQ73627.1| SNF2-related protein [Mucilaginibacter paludis DSM 18603] Length = 945 Score = 125 bits (315), Expect = 3e-27, Method: Composition-based stats. Identities = 36/208 (17%), Positives = 74/208 (35%), Gaps = 22/208 (10%) Query: 5 HKFQRELYCDLQGENIEAF--NSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKAL-EV 61 + + ++ +++ E + + Q+ N + E W K + L + Sbjct: 727 EQIRSSIFLEIEQEGFDKSKLTIIQGITRLRQVCNSPLLLQHEGFWCP-DSVKTEVLVDE 785 Query: 62 IIEKANAAPIIVAYHFNSDLARLQKAFPQGRT-----------LDKDPCTIQEWNEGKIP 110 ++ ++V F L L K + + + EG Sbjct: 786 LLNNLKGHKVLVFSQFTKMLDLLAKQLEELKLDFFHFDGQTPSKQRMEMVNSFQEEGNTT 845 Query: 111 -LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYY 169 + + GLNL + ++ F WW+ QQ I+R + G + VF Y Sbjct: 846 NIFLISLMAGNMGLNLT-AADYVILFDPWWNTAVEQQAIDR-----THRIGQTKKVFAYK 899 Query: 170 LIAQNTIDELVLQRLRTKSTIQDLLLNA 197 +I ++TI+E ++ K ++ D L+ Sbjct: 900 MICRDTIEEKIINLQEKKKSLSDSLIGG 927 >gi|170755011|ref|YP_001781230.1| SNF2 family helicase [Clostridium botulinum B1 str. Okra] gi|169120223|gb|ACA44059.1| helicase, Snf2 family [Clostridium botulinum B1 str. Okra] Length = 1097 Score = 125 bits (315), Expect = 3e-27, Method: Composition-based stats. Identities = 37/210 (17%), Positives = 82/210 (39%), Gaps = 24/210 (11%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLA-NGAVYYDEEKHWKEVHDEKIKALE 60 + Y + + + L+ + S + QL + ++ DE K K++ Sbjct: 877 RIYKAYMKSIKEKLKNNKEDKITIFSYLTRLRQLCLDPSIIIDEYK----GGSSKLRIAM 932 Query: 61 VIIEKA--NAAPIIVAYHFNSDLARLQKAFPQ---------GRTLDKDP-CTIQEWNEGK 108 ++++ I++ F S L + + + G T + + ++N+ Sbjct: 933 ELVQEGVDEGKKILLFSQFTSVLKNISRLLKKECIEYFYLDGSTNASERIKLVDKFNKNS 992 Query: 109 -IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFV 167 + + + G GLNL N+++ F WW+ Q +R + G K V V Sbjct: 993 HVKVFLISLKAGGTGLNLT-SANLVIHFDPWWNPAVEDQATDR-----AHRIGQKNLVQV 1046 Query: 168 YYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 L+ + TI+E ++ K + + ++N+ Sbjct: 1047 IKLVCKGTIEEKIIMLQEDKKELINNVMNS 1076 >gi|29840686|ref|NP_829792.1| Snf2/Rad54 family helicase [Chlamydophila caviae GPIC] gi|29835036|gb|AAP05670.1| helicase, Snf2/Rad54 family [Chlamydophila caviae GPIC] Length = 1205 Score = 125 bits (315), Expect = 3e-27, Method: Composition-based stats. Identities = 36/222 (16%), Positives = 92/222 (41%), Gaps = 24/222 (10%) Query: 2 KQYHK-FQREL-----YCDLQGENIEAFNSASKTVKCLQLANG-AVYYDEEKHWKEVHDE 54 K Y +RE + + + + + Q+ N A+++ ++E Sbjct: 956 KLYQSTLKREKAQIQQLESPEEQTVNYLHVFALLNHLKQICNHPAIFFKNPDKYREHESG 1015 Query: 55 KIKALEVIIEKA--NAAPIIVAYHFNSDLARL---------QKAFPQGRTLDKDPCTIQE 103 K A ++ ++ + ++V + + + + A QG++L++ Sbjct: 1016 KWNAFVRLLHESLSSGYKVVVFSQYIHMIRIIMLYLEEIGVKYASIQGKSLNRKEEIEYF 1075 Query: 104 WNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKR 163 + + + + G G+NL GN+++ + WW+ + Q ++R+ + G K Sbjct: 1076 TTDPECRVFVGSLLAAGTGINLT-AGNVVIMYDRWWNPAKENQALDRV-----HRIGQKN 1129 Query: 164 AVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIHV 205 VF+Y L+ ++T++E + + K + D +++ +H+ Sbjct: 1130 TVFIYKLMTEDTLEERIHYLIEKKIRLLDKVISTQNSNILHM 1171 >gi|127512820|ref|YP_001094017.1| SNF2-related protein [Shewanella loihica PV-4] gi|126638115|gb|ABO23758.1| SNF2-related protein [Shewanella loihica PV-4] Length = 1161 Score = 125 bits (315), Expect = 3e-27, Method: Composition-based stats. Identities = 41/188 (21%), Positives = 78/188 (41%), Gaps = 19/188 (10%) Query: 17 GENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIK-ALEVIIEKANAAPIIVAY 75 GE + + S V Q G +E + + ++ L +IE + I++ Sbjct: 955 GETENSKVAISPEVNLSQSVTGLDGAQDELNAESSKLAWLENKLPSMIE--DGRNILIFS 1012 Query: 76 HFNSDLARLQK---------AFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQ 126 F S L + + GR+ +D I+ + G++ + + G GLNL Sbjct: 1013 SFTSMLDLIAEQLERQQIGYEMLTGRSRHRDR-IIERFRRGEVNVFLISLKAGGSGLNLT 1071 Query: 127 YGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRT 186 ++++ WW+ +Q +R + G + VFVY LI QNT++E + Q ++ Sbjct: 1072 E-ADVVIHVDPWWNPAAEEQASDR-----AYRIGQDKPVFVYKLICQNTVEERIQQLQQS 1125 Query: 187 KSTIQDLL 194 K + + Sbjct: 1126 KQALAQSM 1133 >gi|308176367|ref|YP_003915773.1| putative ATP-dependent helicase [Arthrobacter arilaitensis Re117] gi|307743830|emb|CBT74802.1| putative ATP-dependent helicase [Arthrobacter arilaitensis Re117] Length = 1115 Score = 125 bits (315), Expect = 3e-27, Method: Composition-based stats. Identities = 44/201 (21%), Positives = 76/201 (37%), Gaps = 21/201 (10%) Query: 8 QRELYCDLQGE-NIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEK- 65 +R+ L + + F LA D E +V K++AL ++ Sbjct: 905 ERQKILHLVEDLDRNRFTIFQSLTHLRMLALEPSLVDPE--LSDVTGSKLEALFDQLDDV 962 Query: 66 -ANAAPIIVAYHFNSDLARLQKA---------FPQGRTLDKDPCTIQEWNEGKIPLLFAH 115 ++ F S L L + G T ++ I+++ EG+ PL Sbjct: 963 VGEGHRALIFSQFTSYLKVLADKLTERGVKFVYLDGNTRNR-AKVIEQFKEGEAPLFLIS 1021 Query: 116 PASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNT 175 + G GLNL + WW+ Q I+R + G R V VY +I+Q T Sbjct: 1022 LKAGGFGLNLTE-ADYCFLLDPWWNPAVEAQAIDR-----THRIGQTRQVMVYRMISQGT 1075 Query: 176 IDELVLQRLRTKSTIQDLLLN 196 I+E V+ +K + +++ Sbjct: 1076 IEEKVVALQESKRKLISTVMD 1096 >gi|326920472|ref|XP_003206496.1| PREDICTED: putative DNA helicase INO80 complex homolog 1-like [Meleagris gallopavo] Length = 1545 Score = 125 bits (315), Expect = 3e-27, Method: Composition-based stats. Identities = 34/176 (19%), Positives = 73/176 (41%), Gaps = 21/176 (11%) Query: 44 EEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQ----------- 90 +K K+ AL++++ + + +++ + L++ Sbjct: 1094 PDKESLITDSGKLHALDLLLTRLKSQGHRVLIYSQMTRMIDLLEEYMVYRKHTYMRLDGS 1153 Query: 91 GRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 + ++ N I + + G G+NL + ++F+ W+ QQ ++R Sbjct: 1154 SKISERRDMVADFQNRNDIFVFLLSTRAGGLGINLT-AADTVIFYDSDWNPTVDQQAMDR 1212 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA--LKKETIH 204 + G + V VY LI + TI+E +LQR + KS IQ ++++ K +T+ Sbjct: 1213 -----AHRLGQTKQVTVYRLICKGTIEERILQRAKEKSEIQRMVISGGNFKPDTLK 1263 >gi|89097017|ref|ZP_01169908.1| helicase, SWF/SNF family protein [Bacillus sp. NRRL B-14911] gi|89088397|gb|EAR67507.1| helicase, SWF/SNF family protein [Bacillus sp. NRRL B-14911] Length = 1061 Score = 125 bits (315), Expect = 3e-27, Method: Composition-based stats. Identities = 35/213 (16%), Positives = 79/213 (37%), Gaps = 27/213 (12%) Query: 2 KQYH----KFQRELYCDLQGENI--EAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEK 55 K Y K + + L + + + + Q+ + + + K Sbjct: 838 KLYAAYLAKLRHDTLKHLDKDTLRKNKIRILAGLTRLRQICCHPALFVDG---YKGSSAK 894 Query: 56 IKALEVIIEKA--NAAPIIVAYHFNSDLARLQKA---------FPQGRTLDKDP-CTIQE 103 + L II+++ + +++ F L + + + G+T ++ Sbjct: 895 YEQLLQIIKESRLSGRRVLIFSQFTKMLDMIGRELARQGIGFFYLDGQTPSEERVKLCGR 954 Query: 104 WNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKR 163 +N G+ + G GLNL G + ++ + LWW+ Q +R + G + Sbjct: 955 FNSGEHDFFLISLKAGGTGLNLT-GADTVILYDLWWNPAVENQAADR-----AYRMGQRH 1008 Query: 164 AVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 V V L+A+ TI+E + + K + + ++ Sbjct: 1009 NVQVIKLLARGTIEEKMNELQDKKRNLIEEVIE 1041 >gi|326798503|ref|YP_004316322.1| SNF2-related protein [Sphingobacterium sp. 21] gi|326549267|gb|ADZ77652.1| SNF2-related protein [Sphingobacterium sp. 21] Length = 970 Score = 125 bits (315), Expect = 3e-27, Method: Composition-based stats. Identities = 40/208 (19%), Positives = 83/208 (39%), Gaps = 24/208 (11%) Query: 4 YHKFQ---RELYCDLQGENIEAFN---SASKTVKCLQLANGAVYYDEEKHWKEV-HDEKI 56 Y K + R + + + + + K QLAN DE+ + + + Sbjct: 751 YEKIKSEYRNVLLEQSLDELMVKSQIQVLQGLTKLRQLANHPRMVDEDYEGESGKFENVV 810 Query: 57 KALEVIIEKANAAPIIVAYHF---------NSDLARLQKAFPQGRTLDKDPCTIQEWNEG 107 L+ ++ + +++ F + D +++ A+ G T +++ N Sbjct: 811 HTLDSVLSR--GHKVLIFSQFVKQLEIFRRHFDKKKIRYAYLDGSTRNREDVVNDFRNNE 868 Query: 108 KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFV 167 ++ L + G GLNL + + WW+ QQ I+R + G + VF+ Sbjct: 869 EVKLFLISIKAGGVGLNLIEADYVFIL-DPWWNPAVEQQAIDR-----SHRIGQTKNVFI 922 Query: 168 YYLIAQNTIDELVLQRLRTKSTIQDLLL 195 Y I +++++E +L K TI + L+ Sbjct: 923 YKFITKDSVEEKILALQDRKKTIANQLI 950 >gi|310779269|ref|YP_003967602.1| SNF2-related protein [Ilyobacter polytropus DSM 2926] gi|309748592|gb|ADO83254.1| SNF2-related protein [Ilyobacter polytropus DSM 2926] Length = 920 Score = 125 bits (314), Expect = 3e-27, Method: Composition-based stats. Identities = 48/214 (22%), Positives = 82/214 (38%), Gaps = 29/214 (13%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSAS-------KTVKCLQLANGAVYYDEEKHWKEVHDE 54 K Y + +R Y DL I+ + QLA+ E V Sbjct: 699 KIYDE-RRLFYYDLIHNQIKEHGIGKSQIFILQALNELRQLASCPEMKTEG----LVSST 753 Query: 55 KIKALEVIIEKA--NAAPIIVAYHFNS---------DLARLQKAFPQGRTLDKDPCTIQE 103 K + L I +A N I++ +F D ++ + G T D+ + Sbjct: 754 KREILIENIREAVDNGHKILIFTNFIRSIENICEDLDKHNIKHLYMTGATKDRQSLVEKF 813 Query: 104 WNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKR 163 N+ K + + G GLNL + + + WW+ Q ++R + G R Sbjct: 814 QNDKKCKVFVMTLKTGGVGLNLT-AADTIFIYDPWWNKTAEDQAVDR-----SHRMGQDR 867 Query: 164 AVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 VF Y LI + TI+E +L+ KS + + L+++ Sbjct: 868 TVFSYKLITKGTIEEKILKLQEEKSRLFEKLISS 901 >gi|54309827|ref|YP_130847.1| hypothetical protein PBPRA2667 [Photobacterium profundum SS9] gi|46914265|emb|CAG21045.1| hypothetical protein PBPRA2667 [Photobacterium profundum SS9] Length = 1298 Score = 125 bits (314), Expect = 3e-27, Method: Composition-based stats. Identities = 37/208 (17%), Positives = 82/208 (39%), Gaps = 24/208 (11%) Query: 3 QYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGA--VYYDEEKHWKEVHDEKIKALE 60 Y ++E + + + Q+ + V+ + ++ +++ +AL+ Sbjct: 1083 AYEAIRKESVAVAKSGK-GMVEVLACLTRLRQVCCDSRLVFSEMDQPSSKLN----EALQ 1137 Query: 61 VIIEKANAA-PIIVAYHFNSDL---------ARLQKAFPQGRTLDKDP-CTIQEWNEGKI 109 ++ E I+V F + L + ++ G++ + I + GK Sbjct: 1138 LVKEAREGQHRILVFSQFVTLLKMFADQLEGDGINYSYLDGKSSSRQRKQAIDAFTSGKK 1197 Query: 110 PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYY 169 + + G GLNL + ++ WW+ Q +R + G + V VY Sbjct: 1198 EVFLISLKAGGTGLNLTE-ADTVIHLDPWWNPAVEDQASDR-----AYRMGQTKPVTVYR 1251 Query: 170 LIAQNTIDELVLQRLRTKSTIQDLLLNA 197 L+A NTI+E ++ ++K + D +L+ Sbjct: 1252 LVATNTIEEKIVLLHQSKRDLADKVLSG 1279 >gi|62234443|ref|NP_080850.2| putative DNA helicase INO80 complex homolog 1 [Mus musculus] gi|114149323|sp|Q6ZPV2|INO80_MOUSE RecName: Full=Putative DNA helicase INO80 complex homolog 1 gi|123232376|emb|CAM22022.1| INO80 homolog (S. cerevisiae) [Mus musculus] gi|123236330|emb|CAM25341.1| INO80 homolog (S. cerevisiae) [Mus musculus] Length = 1559 Score = 125 bits (314), Expect = 3e-27, Method: Composition-based stats. Identities = 34/176 (19%), Positives = 73/176 (41%), Gaps = 21/176 (11%) Query: 44 EEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAF----------PQG 91 K K+ AL+V++ + + +++ + L++ Sbjct: 1094 PGKESLITDSGKLYALDVLLTRLKSQGHRVLIYSQMTRMIDLLEEYMVYRKHTYMRLDGS 1153 Query: 92 RTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 + + + ++ I + + G G+NL + ++F+ W+ QQ ++R Sbjct: 1154 SKISERRDMVADFQTRNDIFVFLLSTRAGGLGINLT-AADTVIFYDSDWNPTVDQQAMDR 1212 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA--LKKETIH 204 + G + V VY LI + TI+E +LQR + KS IQ ++++ K +T+ Sbjct: 1213 -----AHRLGQTKQVTVYRLICKGTIEERILQRAKEKSEIQRMVISGGNFKPDTLK 1263 >gi|15836368|ref|NP_300892.1| SWI/SNF family helicase_1 [Chlamydophila pneumoniae J138] gi|8979209|dbj|BAA99043.1| SWI/SNF family helicase_1 [Chlamydophila pneumoniae J138] Length = 1215 Score = 125 bits (314), Expect = 4e-27, Method: Composition-based stats. Identities = 36/215 (16%), Positives = 89/215 (41%), Gaps = 21/215 (9%) Query: 6 KFQRELYCDLQGENIEAFNSA---SKTVKCLQLANG-AVYYDEEKHWKEVHDEKIKALEV 61 + ++ L+ A N + Q+ + AV++ + +K K A Sbjct: 965 QREKSHIQKLETPEEPATNFLHIFALLNHLKQICDHPAVFFKDPDQYKNYESGKWNAFVK 1024 Query: 62 IIEKA--NAAPIIVAYHFNSDLARL---------QKAFPQGRTLDKDPCTIQEWNEGKIP 110 +++++ ++V + + + + A QG++L++ + Sbjct: 1025 LLKESLNAGYKVVVFSQYIHMIRIITLYLEEIGIKYASIQGKSLNRKEEIETFTTDPNCQ 1084 Query: 111 LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYL 170 + + G G+NL GN+++ + WW+ + Q ++R+ + G K VF+Y L Sbjct: 1085 VFVGSLLAAGTGINLT-AGNVVIMYDRWWNPAKEIQALDRV-----HRIGQKNTVFIYKL 1138 Query: 171 IAQNTIDELVLQRLRTKSTIQDLLLNALKKETIHV 205 I ++T++E + + K + D ++ + +H+ Sbjct: 1139 ITEDTLEERIHYLIEKKIRLLDKVIASQDSNILHM 1173 >gi|163751730|ref|ZP_02158948.1| SNF2-related:Helicase, C-terminal:SWIM Zn-finger [Shewanella benthica KT99] gi|161328382|gb|EDP99541.1| SNF2-related:Helicase, C-terminal:SWIM Zn-finger [Shewanella benthica KT99] Length = 1077 Score = 125 bits (314), Expect = 4e-27, Method: Composition-based stats. Identities = 33/195 (16%), Positives = 77/195 (39%), Gaps = 18/195 (9%) Query: 9 RELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANA 68 R++ C ++ + L N A + L ++E+ Sbjct: 865 RQVCCHPDLLKLDYIEPSDLANADLADPNSANGVQPLDTRSGKLNWLAAKLPGMLEE--G 922 Query: 69 APIIVAYHFNSDLARLQKAFPQ---------GRTLDKDPCTIQEWNEGKIPLLFAHPASC 119 +++ F S L+ + + + G++ D+ ++ + + ++P+ + Sbjct: 923 RRVLIFSSFTSMLSLIGELLEKLGISFVELTGKSRDR-GALVERFQQREVPIFLISLKAG 981 Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 G GLNL ++++ WW+ QQ +R + G ++VFVY LI ++T++E Sbjct: 982 GAGLNLT-AADVVIHIDPWWNPAAEQQASDR-----AHRIGQDKSVFVYKLICKDTVEER 1035 Query: 180 VLQRLRTKSTIQDLL 194 + +K + + Sbjct: 1036 IQLLQESKHNLAQSI 1050 >gi|269955093|ref|YP_003324882.1| Non-specific serine/threonine protein kinase [Xylanimonas cellulosilytica DSM 15894] gi|269303774|gb|ACZ29324.1| Non-specific serine/threonine protein kinase [Xylanimonas cellulosilytica DSM 15894] Length = 1102 Score = 125 bits (314), Expect = 4e-27, Method: Composition-based stats. Identities = 40/210 (19%), Positives = 75/210 (35%), Gaps = 25/210 (11%) Query: 2 KQYH---KFQRELYCDLQGENIEAFNSA--SKTVKCLQLANGAVYYDEEKHWKEVHDEKI 56 + Y + +R + ++++ A ++A A D + K+ Sbjct: 878 RAYDARLQRERTRVLGML-DDVDGNRLAIFKSLTTLRRMALDASLVDPSASA-GIPSSKL 935 Query: 57 KALEVIIEK--ANAAPIIVAYHFNSDLAR---------LQKAFPQGRTLDKDPCTIQEWN 105 L + + A +V F L+ L+ A+ G T + ++ + Sbjct: 936 DVLVEQVAEVVAEGHRALVFSQFTGYLSLVAARLDALGLRFAYLDGSTR-RRADVVRGFR 994 Query: 106 EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 EG PL + G GLNL + + WW+ Q ++R + G R V Sbjct: 995 EGDAPLFLISLKAGGFGLNLTE-ADHVFLLDPWWNPATEAQAVDR-----THRIGQTRPV 1048 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 V ++A TI+E V+ K+ +L Sbjct: 1049 NVVRMVAAGTIEEKVMALKERKAAAVGAVL 1078 >gi|184201460|ref|YP_001855667.1| SNF2 family helicase [Kocuria rhizophila DC2201] gi|183581690|dbj|BAG30161.1| putative helicase [Kocuria rhizophila DC2201] Length = 925 Score = 125 bits (314), Expect = 4e-27, Method: Composition-based stats. Identities = 39/179 (21%), Positives = 68/179 (37%), Gaps = 21/179 (11%) Query: 29 TVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKA--NAAPIIVAYHFNS------- 79 LA D E K+ AL + + +V F S Sbjct: 737 LTTLRMLALDPALVDPESTA---ASSKLDALFEQLPQLLQEGHRPLVFSQFTSFLKIVAR 793 Query: 80 --DLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSL 137 D A + A+ G T D+ ++ + G+ P+ + G G+NL + Sbjct: 794 RLDEAGIAYAYLDGSTKDR-AAALKTFRSGRAPVFLVSLKAGGFGINLTE-ADYCYLLDP 851 Query: 138 WWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 WW+ Q ++R + G R V VY ++AQ+TI+E V++ K+ + +L+ Sbjct: 852 WWNPAAENQAVDR-----THRIGQTRKVMVYRMVAQDTIEEKVMELKARKAELFSAVLD 905 >gi|157375524|ref|YP_001474124.1| non-specific serine/threonine protein kinase [Shewanella sediminis HAW-EB3] gi|157317898|gb|ABV36996.1| Non-specific serine/threonine protein kinase [Shewanella sediminis HAW-EB3] Length = 1090 Score = 125 bits (314), Expect = 4e-27, Method: Composition-based stats. Identities = 36/192 (18%), Positives = 76/192 (39%), Gaps = 32/192 (16%) Query: 14 DLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEK--ANAAPI 71 Q +++ +F S + A G K+ L + A I Sbjct: 892 SFQSDDVTSFTQESVEQGLTEFATG--------------SGKLNWLADKLPSMLAEGRRI 937 Query: 72 IVAYHFNSDLARLQKAFPQ---------GRTLDKDPCTIQEWNEGKIPLLFAHPASCGHG 122 ++ F S L + + Q G++ D+ ++ + + ++P+ + G G Sbjct: 938 LIFSSFTSMLTLIGELLEQLAVTYVELTGKSRDRAS-LVKRFQQHEVPVFLISLKAGGAG 996 Query: 123 LNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQ 182 LNL ++++ WW+ QQ +R + G ++VFVY LI ++T++E + Sbjct: 997 LNLT-AADVVIHMDPWWNPAAEQQASDR-----AHRIGQDKSVFVYKLICKDTVEERIQL 1050 Query: 183 RLRTKSTIQDLL 194 +K ++ + Sbjct: 1051 LQESKQSLAQSI 1062 >gi|329943269|ref|ZP_08292043.1| helicase conserved C-terminal domain protein [Chlamydophila psittaci Cal10] gi|313848419|emb|CBY17423.1| putative DNA helicase-related protein [Chlamydophila psittaci RD1] gi|325506669|gb|ADZ18307.1| putative DNA helicase [Chlamydophila psittaci 6BC] gi|328814816|gb|EGF84806.1| helicase conserved C-terminal domain protein [Chlamydophila psittaci Cal10] gi|328915108|gb|AEB55941.1| helicase, Snf2/Rad54 family [Chlamydophila psittaci 6BC] Length = 1205 Score = 125 bits (314), Expect = 4e-27, Method: Composition-based stats. Identities = 36/222 (16%), Positives = 92/222 (41%), Gaps = 24/222 (10%) Query: 2 KQY-HKFQREL-----YCDLQGENIEAFNSASKTVKCLQLANG-AVYYDEEKHWKEVHDE 54 K Y +RE + + + + + Q+ N A+++ ++E Sbjct: 956 KLYLSTLKREKAQIQQLESPEEQTVNYLHVFALLNHLKQICNHPAIFFKNPDKYREHESG 1015 Query: 55 KIKALEVIIEKA--NAAPIIVAYHFNSDLARL---------QKAFPQGRTLDKDPCTIQE 103 K +A ++ + + ++V + + + + A QG++L++ Sbjct: 1016 KWEAFVRLLHDSLSSGYKVVVFSQYIHMIRIIMLYLEEIGVKYASIQGKSLNRKEEIEYF 1075 Query: 104 WNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKR 163 + + + + G G+NL GN+++ + WW+ + Q ++R+ + G K Sbjct: 1076 TTDPECRVFVGSLLAAGTGINLT-AGNVVIMYDRWWNPAKENQALDRV-----HRIGQKN 1129 Query: 164 AVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIHV 205 VF+Y L+ ++T++E + + K + D +++ +H+ Sbjct: 1130 TVFIYKLMTEDTLEERIHYLIEKKIRLLDKVISTQDSNILHM 1171 >gi|162452831|ref|YP_001615198.1| hypothetical protein sce4555 [Sorangium cellulosum 'So ce 56'] gi|161163413|emb|CAN94718.1| hypothetical protein sce4555 [Sorangium cellulosum 'So ce 56'] Length = 1270 Score = 125 bits (314), Expect = 4e-27, Method: Composition-based stats. Identities = 38/159 (23%), Positives = 65/159 (40%), Gaps = 18/159 (11%) Query: 51 VHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFP---------QGRTLDKDPC 99 + K+ ++E+ A +V F S LA +++A G T K Sbjct: 1075 LDSSKLARFLGLVEELCAEGQRALVFSQFTSHLALVREALEARGVAYVYLDGETPRKARA 1134 Query: 100 T-IQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQ 158 ++E+ EG PL + G G+NL N ++ WW+ Q +R + Sbjct: 1135 ERVREFQEGSAPLFLISLKAGGFGINLTAATN-VIHLDPWWNPAVEDQASDR-----AHR 1188 Query: 159 AGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 G +R V +Y L+A TI+E +L K ++ +L Sbjct: 1189 LGQRRPVTIYRLVALGTIEEKMLSLHAEKRSLVAQVLGG 1227 >gi|62185500|ref|YP_220285.1| putative DNA helicase-related protein [Chlamydophila abortus S26/3] gi|62148567|emb|CAH64339.1| putative DNA helicase-related protein [Chlamydophila abortus S26/3] Length = 1206 Score = 125 bits (314), Expect = 4e-27, Method: Composition-based stats. Identities = 36/222 (16%), Positives = 92/222 (41%), Gaps = 24/222 (10%) Query: 2 KQY-HKFQREL-----YCDLQGENIEAFNSASKTVKCLQLANG-AVYYDEEKHWKEVHDE 54 K Y +RE + + + + + Q+ N A+++ ++E Sbjct: 956 KLYLSTLKREKAQIQQLESPEEQTVNYLHVFALLNHLKQICNHPAIFFKNPDKYREHESG 1015 Query: 55 KIKALEVIIEKA--NAAPIIVAYHFNSDLARL---------QKAFPQGRTLDKDPCTIQE 103 K +A ++ + + ++V + + + + A QG++L++ Sbjct: 1016 KWEAFVRLLHDSLSSGYKVVVFSQYIHMIRIIMLYLEEIGVKYASIQGKSLNRKEEIEYF 1075 Query: 104 WNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKR 163 + + + + G G+NL GN+++ + WW+ + Q ++R+ + G K Sbjct: 1076 TTDPECRVFVGSLLAAGTGINLT-AGNVVIMYDRWWNPAKENQALDRV-----HRIGQKN 1129 Query: 164 AVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIHV 205 VF+Y L+ ++T++E + + K + D +++ +H+ Sbjct: 1130 TVFIYKLMTEDTLEERIHYLIEKKIRLLDKVISTQDSNILHM 1171 >gi|327259622|ref|XP_003214635.1| PREDICTED: putative DNA helicase INO80 complex homolog 1-like [Anolis carolinensis] Length = 1421 Score = 125 bits (313), Expect = 4e-27, Method: Composition-based stats. Identities = 35/176 (19%), Positives = 73/176 (41%), Gaps = 21/176 (11%) Query: 44 EEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQ----------- 90 +K K+ AL+V++ + + +++ + L++ Sbjct: 1095 PDKESLITDSGKLYALDVLLTRLKSQGHRVLIYSQMTRMIDLLEEYMVYRKHTYMRLDGS 1154 Query: 91 GRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 + ++ N I + + G G+NL + ++F+ W+ QQ ++R Sbjct: 1155 SKISERRDMVADFQNRNDIFVFLLSTRAGGLGINLT-AADTVIFYDSDWNPTVDQQAMDR 1213 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA--LKKETIH 204 + G + V VY LI + TI+E +LQR + KS IQ ++++ K +T+ Sbjct: 1214 -----AHRLGQTKQVTVYRLICKGTIEERILQRAKEKSEIQRMVISGGNFKPDTLK 1264 >gi|325279022|ref|YP_004251564.1| SNF2-related protein [Odoribacter splanchnicus DSM 20712] gi|324310831|gb|ADY31384.1| SNF2-related protein [Odoribacter splanchnicus DSM 20712] Length = 994 Score = 125 bits (313), Expect = 4e-27, Method: Composition-based stats. Identities = 43/207 (20%), Positives = 79/207 (38%), Gaps = 22/207 (10%) Query: 1 MKQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEE-KHWKEVHDEKIKAL 59 ++ Y +RE +L+ + F ++ Q+AN + + E + L Sbjct: 785 VRNYILSERENQGELRSD----FMVLKALIRLRQIANHPRLVETGYEGNSGKFSEVFRML 840 Query: 60 EVIIEKANAAPIIVAYHFNSDLARL---------QKAFPQGRTLDKDPCTIQEWNEGKIP 110 +I A+ ++V F L + + A G T D++ + + Sbjct: 841 GEVI--ASGHKVLVFSSFVKYLKMVAEETMVRGWKYAMLTGLTADREQTIRHFQADPECR 898 Query: 111 LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYL 170 + + G GLNL + + WW++ Q + R + G KRAVFVY Sbjct: 899 IFLISLKAGGVGLNLTEADYVFIL-DPWWNVAAENQAVSR-----AHRIGQKRAVFVYRF 952 Query: 171 IAQNTIDELVLQRLRTKSTIQDLLLNA 197 I T++E +L K + D ++ A Sbjct: 953 ITAGTLEEKILAIQERKQRLADSVITA 979 >gi|260494465|ref|ZP_05814595.1| LOW QUALITY PROTEIN: SWF/SNF family helicase [Fusobacterium sp. 3_1_33] gi|260197627|gb|EEW95144.1| LOW QUALITY PROTEIN: SWF/SNF family helicase [Fusobacterium sp. 3_1_33] Length = 683 Score = 125 bits (313), Expect = 5e-27, Method: Composition-based stats. Identities = 42/204 (20%), Positives = 74/204 (36%), Gaps = 25/204 (12%) Query: 10 ELYCDLQGENIEAFNSASKTVKCLQLANGA--VYYDEEKHWKEVHDEKIKALEVIIEKA- 66 E N + K Q+ +Y D KI A +I+K+ Sbjct: 473 ETLAQSIDVNTNKIEVLAMLTKLRQICIDPRLLYED-----ISSSSSKINACIELIKKSI 527 Query: 67 -NAAPIIVAYHFNSDLAR---------LQKAFPQGRTLD-KDPCTIQEWNEGKIPLLFAH 115 N I++ F + L + G T K ++++ +PL Sbjct: 528 ENKQRILLFSSFTTVLDLVAQECDNLSIPYFILTGETNKIKRNQLVEDFQNEAVPLFLIS 587 Query: 116 PASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNT 175 + G GLNL ++++ WW++ Q +R + G + V V+ LI +NT Sbjct: 588 LKAGGTGLNLTK-ASVVIHLDPWWNISAQNQATDR-----AHRIGQEDTVQVFNLITKNT 641 Query: 176 IDELVLQRLRTKSTIQDLLLNALK 199 I+E +L K + D+ + K Sbjct: 642 IEEKILNLQNKKKELSDIFVENSK 665 >gi|312868420|ref|ZP_07728620.1| SNF2 family N-terminal domain protein [Streptococcus parasanguinis F0405] gi|311096165|gb|EFQ54409.1| SNF2 family N-terminal domain protein [Streptococcus parasanguinis F0405] Length = 1032 Score = 125 bits (313), Expect = 5e-27, Method: Composition-based stats. Identities = 38/193 (19%), Positives = 76/193 (39%), Gaps = 21/193 (10%) Query: 21 EAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFN 78 S ++ Q+ + + E+ + K+++L ++ + +++ F Sbjct: 832 SKVEILSGLMRLRQICDTPALFMED---YQGDSGKLESLRDLLGQIKDGEHRVLIFSQFR 888 Query: 79 SDLARLQKAFPQ---------GRTLDKDPCTI-QEWNEGKIPLLFAHPASCGHGLNLQYG 128 L L+K Q G T KD + +N G+ + G GLNL G Sbjct: 889 GMLDILEKEIDQLGMTSFKITGSTPAKDRQEMTNAFNAGERHAFLISLKAGGVGLNLT-G 947 Query: 129 GNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKS 188 + ++ LWW+ Q I R + G ++ V VY +I + TI+E + + +K Sbjct: 948 ADTVILVDLWWNPAVEDQAIGR-----AHRMGQEQNVEVYRMITRGTIEEKIQELQASKR 1002 Query: 189 TIQDLLLNALKKE 201 + +L+ + Sbjct: 1003 HLVSTILDGTETR 1015 >gi|294660619|ref|NP_853484.2| SNF2 family helicase [Mycoplasma gallisepticum str. R(low)] gi|284812282|gb|AAP57052.2| SNF2 family helicase [Mycoplasma gallisepticum str. R(low)] gi|284930981|gb|ADC30920.1| SNF2 family helicase [Mycoplasma gallisepticum str. R(high)] gi|284931739|gb|ADC31677.1| SNF2 family helicase [Mycoplasma gallisepticum str. F] Length = 1108 Score = 125 bits (313), Expect = 5e-27, Method: Composition-based stats. Identities = 44/217 (20%), Positives = 81/217 (37%), Gaps = 30/217 (13%) Query: 1 MKQYHKFQRELYCDLQGENIEAFNS--------ASKTVKCLQLANGAVYYDEEKHWKEVH 52 M Y K ++E+ ++ S A + Q+ + E Sbjct: 882 MSFYRKREQEVKEEILKIIQNKEQSRKGLGIMLAKLLNELRQICCSPKLLNPS---FEGE 938 Query: 53 DEKIKALEVIIEKA--NAAPIIVAYH-------FNSDLAR--LQKAFPQGRTLDK-DPCT 100 + K A II A + ++ F +L + ++ G T + Sbjct: 939 NAKFVAAMDIINNAIKSNKKTLLFSQYLGVISLFKKELEQRNIKYFILTGDTPKEVRLQY 998 Query: 101 IQEWNEGKIP-LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQA 159 + ++N K P + A + G GLNL G I++ + LWW+L Q +R + Sbjct: 999 VNDFNNAKEPAVFIASLKAGGVGLNLT-GAEIVIHYDLWWNLALQNQATDR-----AHRI 1052 Query: 160 GFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 G + + VY +IA +TI+E ++ K + L+ Sbjct: 1053 GQRNHLQVYRIIAADTIEERIVAIQERKKELAAKLIQ 1089 >gi|162450775|ref|YP_001613142.1| Snf2/Rad54 family helicase [Sorangium cellulosum 'So ce 56'] gi|161161357|emb|CAN92662.1| helicase, SNF2/RAD54 family [Sorangium cellulosum 'So ce 56'] Length = 1031 Score = 125 bits (313), Expect = 5e-27, Method: Composition-based stats. Identities = 39/215 (18%), Positives = 70/215 (32%), Gaps = 30/215 (13%) Query: 3 QYHKFQ---RELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVH------- 52 Y + R+ + E + ++ Q A Sbjct: 806 LYDAVRAATRKDVVEKLAEGASVMAALEALLRLRQAACHPALIPGSSAGGAAPAARSAPS 865 Query: 53 ---DEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAF---------PQGRTLDKDPCT 100 I+ALE + A+ +V + S L ++ G T D+ Sbjct: 866 SKVTRLIEALEECV--ADGHKALVFSQWTSLLDLVEPHLGAAGIPWSRLDGGTRDRAGVV 923 Query: 101 IQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 + + G P++ + G GLNL + + WW+ Q +R + G Sbjct: 924 NEFQSPGGPPVMLISLKAGGTGLNLT-AADHVFLLDPWWNPAVEDQAADR-----AHRIG 977 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 R V V+ L+A++T++E +L K I L Sbjct: 978 QHRPVMVHRLVAKDTVEEGILALQERKRAIAGAAL 1012 >gi|228476452|ref|ZP_04061142.1| ATP-dependent RNA helicase [Streptococcus salivarius SK126] gi|228251873|gb|EEK10919.1| ATP-dependent RNA helicase [Streptococcus salivarius SK126] Length = 1031 Score = 125 bits (313), Expect = 5e-27, Method: Composition-based stats. Identities = 37/211 (17%), Positives = 75/211 (35%), Gaps = 25/211 (11%) Query: 1 MKQYHKFQRELYCDLQGENIE--AFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKA 58 + Q + Q+ L + I S + Q+ + + + K+ + Sbjct: 811 LAQLQQMQQGLI-SASDQEINRRKVEILSGITRLRQICDTPALFMD----YAGDSGKLDS 865 Query: 59 LEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTL----------DKDPCTIQEWNE 106 L ++ + + +++ F L + + D + +N+ Sbjct: 866 LRELLSQIKESDHRVLIFSQFRGMLDITEGLLQELGISSYKLTGSTPSDSRQEMTRAFNQ 925 Query: 107 GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVF 166 G + G GLNL G + ++ LWW+ Q I R + G ++ V Sbjct: 926 GSRDAFLISLKAGGVGLNLT-GADTVILIDLWWNPAVEMQAISR-----AHRIGQEQNVE 979 Query: 167 VYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 VY LI + TI+E +L+ K + +L+ Sbjct: 980 VYRLITRGTIEEKILELQEGKKNLVTTVLDG 1010 >gi|169343905|ref|ZP_02864901.1| putative helicase [Clostridium perfringens C str. JGS1495] gi|169298025|gb|EDS80116.1| putative helicase [Clostridium perfringens C str. JGS1495] Length = 1065 Score = 125 bits (313), Expect = 5e-27, Method: Composition-based stats. Identities = 32/190 (16%), Positives = 73/190 (38%), Gaps = 22/190 (11%) Query: 21 EAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKAN--AAPIIVAYHFN 78 + N + K ++ + K+ ++ I++ A+ I++ F Sbjct: 864 DKINLFAYLTKLREICLDPSLVVPDYT---GGSSKLTVVKEIVKDASESGKKILLFSQFT 920 Query: 79 SDLARLQKAFPQ-----------GRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQY 127 S L ++++ F + D+ + + I + + G GLNL Sbjct: 921 SVLKKIEEDFKKEDISYLYLDGGTSAKDRVERVKRFNEDSNIKVFLISLKAGGVGLNLT- 979 Query: 128 GGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTK 187 ++++ F WW+ +Q +R + G + V V L+A++TI+E ++ K Sbjct: 980 SASVVIHFDPWWNPAVEEQATDR-----AHRFGQENKVEVIKLVAKDTIEEKIVLMQEDK 1034 Query: 188 STIQDLLLNA 197 + L++ Sbjct: 1035 RELIQSLMDG 1044 >gi|94263787|ref|ZP_01287593.1| SNF2-related:Helicase-like [delta proteobacterium MLMS-1] gi|93455798|gb|EAT05965.1| SNF2-related:Helicase-like [delta proteobacterium MLMS-1] Length = 1439 Score = 125 bits (313), Expect = 5e-27, Method: Composition-based stats. Identities = 38/212 (17%), Positives = 76/212 (35%), Gaps = 24/212 (11%) Query: 2 KQYHKFQRELYCDLQGENIEAFNS-----ASKTVKCLQLANGA-VYYDEEKHWKEVHDEK 55 + +R LQ + EA S ++ ++ + A + + Sbjct: 1214 ALHETIRRRAVEVLQEDEGEAAGSRHLKVLAELMRLRRAACHPRLVLGKGALMAGKLPLF 1273 Query: 56 IKALEVIIEKANAAPIIVAYHFNSDLARLQKAFP---------QGRTLDKDPC-TIQEWN 105 + L II +N +V F LA +++ G T ++ + + Sbjct: 1274 AEVLHDII--SNRHKALVFSQFVDHLAIVREYLDGQGIGYQYLDGSTPARERQRAVAAFQ 1331 Query: 106 EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 G+ + + G GLNL + ++ WW+ Q +R + G +R V Sbjct: 1332 AGEGEVFCISLKAGGTGLNLT-AADYVIHLDPWWNPAVEDQASDR-----AHRIGQERPV 1385 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 +Y L+ + +I+E +L K + + LL Sbjct: 1386 TIYRLVTKGSIEEKILALHGHKRDLAENLLRG 1417 >gi|312277649|gb|ADQ62306.1| Superfamily II DNA/RNA helicase, SNF2 family [Streptococcus thermophilus ND03] Length = 1031 Score = 125 bits (313), Expect = 5e-27, Method: Composition-based stats. Identities = 37/211 (17%), Positives = 76/211 (36%), Gaps = 25/211 (11%) Query: 1 MKQYHKFQRELYCDLQGENIE--AFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKA 58 + Q + Q+ L + I S + Q+ + + + K+ + Sbjct: 811 LAQLQQMQQGLI-SASDQEINRRKVEILSGITRLRQICDTPALFMD----YAGDSGKLDS 865 Query: 59 LEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTL----------DKDPCTIQEWNE 106 L ++ + + +++ F L ++ + D + +N+ Sbjct: 866 LRDLLSQIKESDHRVLIFSQFRGMLDITEELLQELGISSYKLTGSTPSDSRQEMTRAFNQ 925 Query: 107 GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVF 166 G + G GLNL G + ++ LWW+ Q I R + G K+ V Sbjct: 926 GSRDAFLISLKAGGVGLNLT-GADTVILIDLWWNPAVEMQAISR-----AHRIGQKQNVE 979 Query: 167 VYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 V+ LI + TI+E +L+ K + +L+ Sbjct: 980 VFRLITRGTIEEKILELQEGKKNLVTTVLDG 1010 >gi|329664944|ref|NP_001192313.1| putative DNA helicase INO80 complex homolog 1 [Bos taurus] gi|296483346|gb|DAA25461.1| brahma-like [Bos taurus] Length = 1566 Score = 125 bits (313), Expect = 5e-27, Method: Composition-based stats. Identities = 34/176 (19%), Positives = 74/176 (42%), Gaps = 21/176 (11%) Query: 44 EEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRT-------- 93 K K+ AL+V++ + + +++ + L++ + Sbjct: 1101 PGKESLITDSGKLYALDVLLTRLKSQGHRVLIYSQMTRMIDLLEEYMVYRKHTYMRLDGS 1160 Query: 94 --LDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 + + + ++ I + + G G+NL + ++F+ W+ QQ ++R Sbjct: 1161 SKISERRDMVADFQTRNDIFVFLLSTRAGGLGINLT-AADTVIFYDSDWNPTVDQQAMDR 1219 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA--LKKETIH 204 + G + V VY LI + TI+E +LQR + KS IQ ++++ K +T+ Sbjct: 1220 -----AHRLGQTKQVTVYRLICKGTIEERILQRAKEKSEIQRMVISGGNFKPDTLK 1270 >gi|322390087|ref|ZP_08063622.1| Snf2 family protein [Streptococcus parasanguinis ATCC 903] gi|321143214|gb|EFX38657.1| Snf2 family protein [Streptococcus parasanguinis ATCC 903] Length = 881 Score = 125 bits (313), Expect = 5e-27, Method: Composition-based stats. Identities = 37/193 (19%), Positives = 76/193 (39%), Gaps = 21/193 (10%) Query: 21 EAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFN 78 S ++ Q+ + + E+ + K+++L ++ + +++ F Sbjct: 681 SKVEILSGLMRLRQICDTPALFMED---YQGDSGKLESLRDLLGQIKDGEHRVLIFSQFR 737 Query: 79 SDLARLQKAFPQ---------GRTLDKDPCTI-QEWNEGKIPLLFAHPASCGHGLNLQYG 128 L L++ Q G T KD + +N G+ + G GLNL G Sbjct: 738 GMLDILEQEIDQLGMTSFKITGSTPAKDRQEMTNAFNAGERHAFLISLKAGGVGLNLT-G 796 Query: 129 GNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKS 188 + ++ LWW+ Q I R + G ++ V VY +I + TI+E + + +K Sbjct: 797 ADTVILVDLWWNPAVEDQAIGR-----AHRMGQEQNVEVYRMITRGTIEEKIQELQASKR 851 Query: 189 TIQDLLLNALKKE 201 + +L+ + Sbjct: 852 HLVSTILDGTETR 864 >gi|225871163|ref|YP_002747110.1| helicase [Streptococcus equi subsp. equi 4047] gi|225700567|emb|CAW95068.1| putative helicase [Streptococcus equi subsp. equi 4047] Length = 1034 Score = 125 bits (313), Expect = 5e-27, Method: Composition-based stats. Identities = 38/213 (17%), Positives = 74/213 (34%), Gaps = 27/213 (12%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASK-----TVKCLQLANGAVYYDEEKHWKEVHDEKI 56 Y R++ L + N + + Q+ + + + + K+ Sbjct: 812 AIYLAQLRQMQERLSAATDDDINRSKLEILSGITRLRQICDTPSLFMD----YQGGSGKL 867 Query: 57 KALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQ----------GRTLDKDPCTIQEW 104 L ++ + N ++ F LA +++ Q + + + Sbjct: 868 DNLRTLLLQIKENGHRALLFSQFKGMLALVKQEMDQLGLSSYTITGSTPANDRQEMTRAF 927 Query: 105 NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA 164 N G + G GLNL G + ++ LWW+ Q I R + G + Sbjct: 928 NNGSKDAFLISLKAGGVGLNLT-GADTVILIDLWWNPAVEMQAISR-----AHRIGQEDN 981 Query: 165 VFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 V VY LI + TI+E +L+ K + +L+ Sbjct: 982 VEVYRLITRGTIEEKILELQENKRHLITTVLDG 1014 >gi|168180252|ref|ZP_02614916.1| helicase, Snf2 family [Clostridium botulinum NCTC 2916] gi|182668714|gb|EDT80692.1| helicase, Snf2 family [Clostridium botulinum NCTC 2916] Length = 1097 Score = 125 bits (313), Expect = 5e-27, Method: Composition-based stats. Identities = 36/209 (17%), Positives = 77/209 (36%), Gaps = 22/209 (10%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEV 61 K Y + + + L+ + S + QL +E + K++ Sbjct: 877 KIYKAYMKSIKEKLKNNKEDKITIFSYLTRLRQLCLDPSLIIDE---YKGGSSKLRIAME 933 Query: 62 IIEKA--NAAPIIVAYHFNSDLARLQKAFPQGRT----------LDKDPCTIQEWNEGK- 108 ++++ I++ F S L + K + + + E+N+ Sbjct: 934 LVQEGVDEGKKILLFSQFISVLKNISKLLEKEGIEYFYLDGSTNASERIKLVNEFNKNSH 993 Query: 109 IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVY 168 + + + G GLNL N+++ F WW+ Q +R + G K V V Sbjct: 994 VKVFLISLKAGGTGLNLT-SANLVIHFDPWWNPAIEDQATDR-----AHRIGQKNLVQVI 1047 Query: 169 YLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 L+ + TI+E ++ K + + ++N+ Sbjct: 1048 KLVCKGTIEEKIIMLQEDKKELINNVMNS 1076 >gi|261209238|ref|ZP_05923630.1| Snf2 family protein [Enterococcus faecium TC 6] gi|289565987|ref|ZP_06446425.1| Snf2 family protein [Enterococcus faecium D344SRF] gi|294616209|ref|ZP_06696006.1| Snf2 family protein [Enterococcus faecium E1636] gi|260076784|gb|EEW64519.1| Snf2 family protein [Enterococcus faecium TC 6] gi|289162185|gb|EFD10047.1| Snf2 family protein [Enterococcus faecium D344SRF] gi|291590964|gb|EFF22676.1| Snf2 family protein [Enterococcus faecium E1636] Length = 1064 Score = 125 bits (313), Expect = 5e-27, Method: Composition-based stats. Identities = 36/210 (17%), Positives = 81/210 (38%), Gaps = 22/210 (10%) Query: 1 MKQYHKFQRELY-CDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKAL 59 + + + E+ D + + + Q+ + E+ + K++ + Sbjct: 840 LAYLRQMREEIISMDSEAFKKNRIGILAGLTRLRQICCDPRLFIED---YQGGSGKLEQV 896 Query: 60 EVIIEKA--NAAPIIVAYHFNSDLARLQKAFPQ---------GRTLDKDP-CTIQEWNEG 107 + ++ A N +++ F L LQ+ + G T +D + +N G Sbjct: 897 KDLLVAAKENKRRVLLFSQFTGMLTILQEELAELGISTFYLRGSTKPQDRLSMVDAFNTG 956 Query: 108 KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFV 167 + + + G GLNL G + ++ + LWW+ +Q R + G K V V Sbjct: 957 EKDVFLISLKAGGTGLNLT-GADTVILYDLWWNPAIEEQAAGR-----AHRIGQKNVVEV 1010 Query: 168 YYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + +I++ TI+E + + K + ++ Sbjct: 1011 WRMISEGTIEERMDSLQQEKRELFQKVIQG 1040 >gi|55820334|ref|YP_138776.1| ATP-dependent RNA helicase [Streptococcus thermophilus LMG 18311] gi|55736319|gb|AAV59961.1| ATP-dependent RNA helicase [Streptococcus thermophilus LMG 18311] Length = 1031 Score = 125 bits (313), Expect = 5e-27, Method: Composition-based stats. Identities = 37/211 (17%), Positives = 76/211 (36%), Gaps = 25/211 (11%) Query: 1 MKQYHKFQRELYCDLQGENIE--AFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKA 58 + Q + Q+ L + I S + Q+ + + + K+ + Sbjct: 811 LAQLQQMQQGLI-SASDQEINRRKVEILSGITRLRQICDTPALFMD----YAGDSGKLDS 865 Query: 59 LEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTL----------DKDPCTIQEWNE 106 L ++ + + +++ F L ++ + D + +N+ Sbjct: 866 LRDLLSQIKESDHRVLIFSQFRGMLDITEELLQELGISSYKLTGSTPSDSRQEMTRAFNQ 925 Query: 107 GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVF 166 G + G GLNL G + ++ LWW+ Q I R + G K+ V Sbjct: 926 GSRDAFLISLKAGGVGLNLT-GADTVILIDLWWNPAVEMQAISR-----AHRIGQKQNVE 979 Query: 167 VYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 V+ LI + TI+E +L+ K + +L+ Sbjct: 980 VFRLITRGTIEEKILELQEGKKNLVTTVLDG 1010 >gi|55822225|ref|YP_140666.1| ATP-dependent RNA helicase [Streptococcus thermophilus CNRZ1066] gi|55738210|gb|AAV61851.1| ATP-dependent RNA helicase [Streptococcus thermophilus CNRZ1066] Length = 1031 Score = 125 bits (313), Expect = 5e-27, Method: Composition-based stats. Identities = 37/211 (17%), Positives = 76/211 (36%), Gaps = 25/211 (11%) Query: 1 MKQYHKFQRELYCDLQGENIE--AFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKA 58 + Q + Q+ L + I S + Q+ + + + K+ + Sbjct: 811 LAQLQQMQQGLI-SASDQEINRRKVEILSGITRLRQICDTPALFMD----YAGDSGKLDS 865 Query: 59 LEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTL----------DKDPCTIQEWNE 106 L ++ + + +++ F L ++ + D + +N+ Sbjct: 866 LRDLLSQIKESDHRVLIFSQFRGMLDITEELLQELGISSYKLTGSTPSDSRQEMTRAFNQ 925 Query: 107 GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVF 166 G + G GLNL G + ++ LWW+ Q I R + G K+ V Sbjct: 926 GSRDAFLISLKAGGVGLNLT-GADTVILIDLWWNPAVEMQAISR-----AHRIGQKQNVE 979 Query: 167 VYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 V+ LI + TI+E +L+ K + +L+ Sbjct: 980 VFRLITRGTIEEKILELQEGKKNLVTTVLDG 1010 >gi|110803396|ref|YP_698309.1| DNA/RNA helicase, SNF2 [Clostridium perfringens SM101] gi|110683897|gb|ABG87267.1| putative helicase [Clostridium perfringens SM101] Length = 1069 Score = 125 bits (313), Expect = 5e-27, Method: Composition-based stats. Identities = 32/190 (16%), Positives = 73/190 (38%), Gaps = 22/190 (11%) Query: 21 EAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKAN--AAPIIVAYHFN 78 + N + K ++ + + K+ ++ I++ A+ I++ F Sbjct: 868 DKINLFAYLTKLREICLDPSLVVPD---YKGGSSKLTVVKEIVKDASESGKKILLFSQFT 924 Query: 79 SDLARLQKAFPQ-----------GRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQY 127 S L ++++ F + D+ + + I + + G GLNL Sbjct: 925 SVLQKIEEDFKKEDISYLYLDGGTSAKDRVERVKKFNEDSNIKVFLISLKAGGVGLNLT- 983 Query: 128 GGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTK 187 ++++ F WW+ Q +R + G + V V L+A++TI+E ++ K Sbjct: 984 SASVVIHFDPWWNPAVEDQATDR-----AHRFGQENKVEVIKLVAKDTIEEKIVLMQEDK 1038 Query: 188 STIQDLLLNA 197 + L++ Sbjct: 1039 RELIQSLMDG 1048 >gi|13507759|ref|NP_109708.1| helicases [Mycoplasma pneumoniae M129] gi|2493354|sp|P75093|Y020_MYCPN RecName: Full=Uncharacterized ATP-dependent helicase MPN_020 gi|1673793|gb|AAB95782.1| helicase-like protein [Mycoplasma pneumoniae M129] Length = 1030 Score = 125 bits (313), Expect = 5e-27, Method: Composition-based stats. Identities = 47/202 (23%), Positives = 85/202 (42%), Gaps = 22/202 (10%) Query: 2 KQYHKFQRELYCDLQG-ENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 K Y + + +++ ++ +FN + +K L + + E +K ALE Sbjct: 813 KLYEEERDRGLEEIKQIQDKSSFNILTLILKLRHLCS---LPKNSQGILENSAKKEAALE 869 Query: 61 VIIEK-ANAAPIIVAYHFNSDLARLQKAFPQ----------GRTLDKDPCTIQEWNEGKI 109 +I E N II+ F + + F + ++ I+++N K Sbjct: 870 IIHEAIENQRKIILFTQFIDVIDHFKDTFKEQGIEYFIFDGRKSPKSRHSIIEKFNNAKN 929 Query: 110 P-LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVY 168 P +L A + G G+NL +++ F +WW+ Q +R + G K+ V VY Sbjct: 930 PCVLLASLKAGGVGINLT-AAEVVIHFDVWWNTAVENQATDR-----AHRIGQKKTVQVY 983 Query: 169 YLIAQNTIDELVLQRLRTKSTI 190 +IA+NTI+E V Q K + Sbjct: 984 RIIAKNTIEERVCQVQAEKQEL 1005 >gi|226948925|ref|YP_002804016.1| helicase, Snf2 family [Clostridium botulinum A2 str. Kyoto] gi|226844507|gb|ACO87173.1| helicase, Snf2 family [Clostridium botulinum A2 str. Kyoto] Length = 1097 Score = 125 bits (313), Expect = 5e-27, Method: Composition-based stats. Identities = 36/209 (17%), Positives = 77/209 (36%), Gaps = 22/209 (10%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEV 61 K Y + + + L+ + S + QL +E + K++ Sbjct: 877 KIYKAYMKSIKEKLKNNKEDKITIFSYLTRLRQLCLDPSLIIDE---YKGGSSKLRIAME 933 Query: 62 IIEKA--NAAPIIVAYHFNSDLARLQKAFPQGRT----------LDKDPCTIQEWNEGK- 108 ++++ I++ F S L + K + + + E+N+ Sbjct: 934 LVQEGVDEGKKILLFSQFISVLKNISKLLEKEGIEYFYLDGSTNASERIKLVNEFNKNSH 993 Query: 109 IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVY 168 + + + G GLNL N+++ F WW+ Q +R + G K V V Sbjct: 994 VKVFLISLKAGGTGLNLT-SANLVIHFDPWWNPAIEDQATDR-----AHRIGQKNLVQVI 1047 Query: 169 YLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 L+ + TI+E ++ K + + ++N+ Sbjct: 1048 KLVCKGTIEEKIIMLQEDKKELINNVMNS 1076 >gi|296875956|ref|ZP_06900015.1| Snf2 family protein [Streptococcus parasanguinis ATCC 15912] gi|296433031|gb|EFH18819.1| Snf2 family protein [Streptococcus parasanguinis ATCC 15912] Length = 1032 Score = 125 bits (313), Expect = 6e-27, Method: Composition-based stats. Identities = 37/193 (19%), Positives = 76/193 (39%), Gaps = 21/193 (10%) Query: 21 EAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFN 78 S ++ Q+ + + E+ + K+++L ++ + +++ F Sbjct: 832 SKVEILSGLMRLRQICDTPALFMED---YQGDSGKLESLRDLLGQIKDGDHRVLIFSQFR 888 Query: 79 SDLARLQKAFPQ---------GRTLDKDPCTI-QEWNEGKIPLLFAHPASCGHGLNLQYG 128 L L++ Q G T KD + +N G+ + G GLNL G Sbjct: 889 GMLDILEQEIDQLGMTSFKITGSTPAKDRQEMTNAFNAGERHAFLISLKAGGVGLNLT-G 947 Query: 129 GNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKS 188 + ++ LWW+ Q I R + G ++ V VY +I + TI+E + + +K Sbjct: 948 ADTVILVDLWWNPAVEDQAIGR-----AHRMGQEQNVEVYRMITRGTIEEKIQELQASKR 1002 Query: 189 TIQDLLLNALKKE 201 + +L+ + Sbjct: 1003 HLVSTILDGTETR 1015 >gi|332024475|gb|EGI64673.1| Putative DNA helicase Ino80 [Acromyrmex echinatior] Length = 1115 Score = 125 bits (313), Expect = 6e-27, Method: Composition-based stats. Identities = 33/176 (18%), Positives = 71/176 (40%), Gaps = 21/176 (11%) Query: 44 EEKHWKEVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQKAF----------PQG 91 +K K+ L+ ++ + +++ + L++ Sbjct: 555 PDKQTLVTDAGKLSVLDSLLRRLKEQGHRVLIYSQMTKMIDLLEEYMYHRKHTFMRLDGS 614 Query: 92 RTLDKDPCTIQEWNE-GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 + + ++ + I + + G G+NL + ++F+ W+ QQ ++R Sbjct: 615 SKISDRRDMVADFQKRADIFVFLLSTRAGGLGINLT-AADTVIFYDSDWNPTVDQQAMDR 673 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA--LKKETIH 204 + G + V VY LI + TI+E +LQR R KS IQ ++++ K +T+ Sbjct: 674 -----AHRLGQTKQVTVYRLICKGTIEERILQRAREKSEIQRMVISGGNFKPDTLK 724 >gi|301633331|gb|ADK86885.1| SNF2 family N-terminal domain protein [Mycoplasma pneumoniae FH] Length = 1030 Score = 125 bits (313), Expect = 6e-27, Method: Composition-based stats. Identities = 47/202 (23%), Positives = 85/202 (42%), Gaps = 22/202 (10%) Query: 2 KQYHKFQRELYCDLQG-ENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 K Y + + +++ ++ +FN + +K L + + E +K ALE Sbjct: 813 KLYEEERDRGLEEIKQIQDKSSFNILTLILKLRHLCS---LPKNSQGILENSAKKEAALE 869 Query: 61 VIIEK-ANAAPIIVAYHFNSDLARLQKAFPQ----------GRTLDKDPCTIQEWNEGKI 109 +I E N II+ F + + F + ++ I+++N K Sbjct: 870 IIHEAIENQRKIILFTQFIDVIDHFKDTFKEQGIEYFIFDGRKSPKSRHSIIEKFNNAKN 929 Query: 110 P-LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVY 168 P +L A + G G+NL +++ F +WW+ Q +R + G K+ V VY Sbjct: 930 PCVLLASLKAGGVGINLT-AAEVVIHFDVWWNTAVENQATDR-----AHRIGQKKTVQVY 983 Query: 169 YLIAQNTIDELVLQRLRTKSTI 190 +IA+NTI+E V Q K + Sbjct: 984 RIIAKNTIEERVCQVQAEKQEL 1005 >gi|256789242|ref|ZP_05527673.1| helicase [Streptomyces lividans TK24] Length = 887 Score = 124 bits (312), Expect = 6e-27, Method: Composition-based stats. Identities = 40/213 (18%), Positives = 82/213 (38%), Gaps = 21/213 (9%) Query: 3 QYHKFQRELYCDLQGENIEAFNSA--SKTVKCLQLANG-AVYYDEEKHWKEVHDEKIKAL 59 Y RE ++ G + A Q+ N A + E++ K++ L Sbjct: 660 LYEAVVREALAEIAGADHMARRGMIVKLLTNLKQICNHPAQFLKEDRPKITGRSGKLELL 719 Query: 60 EVIIEK--ANAAPIIVAYHFNSDLARLQKAFP----------QGRTLDKDPCTIQEWNEG 107 + +++ + A ++V + L++ G ++ ++ + +G Sbjct: 720 DELLDTILSEQASVLVFTQYVQMARLLEQHLAARGVSSLFLHGGTSVTARESLVRRFQDG 779 Query: 108 KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFV 167 P+ + G GLNL + +V + WW+ Q +R + G R V V Sbjct: 780 DAPVFLLSLKAAGTGLNLTRAEH-VVHYDRWWNPAVEAQATDR-----AYRIGQTRPVQV 833 Query: 168 YYLIAQNTIDELVLQRLRTKSTIQDLLLNALKK 200 + LIA+ TI++ + L K + D +L + + Sbjct: 834 HRLIAEGTIEDRIAALLNCKRELADAVLGSGEA 866 >gi|289773131|ref|ZP_06532509.1| helicase [Streptomyces lividans TK24] gi|289703330|gb|EFD70759.1| helicase [Streptomyces lividans TK24] Length = 988 Score = 124 bits (312), Expect = 6e-27, Method: Composition-based stats. Identities = 40/213 (18%), Positives = 82/213 (38%), Gaps = 21/213 (9%) Query: 3 QYHKFQRELYCDLQGENIEAFNSA--SKTVKCLQLANG-AVYYDEEKHWKEVHDEKIKAL 59 Y RE ++ G + A Q+ N A + E++ K++ L Sbjct: 761 LYEAVVREALAEIAGADHMARRGMIVKLLTNLKQICNHPAQFLKEDRPKITGRSGKLELL 820 Query: 60 EVIIEK--ANAAPIIVAYHFNSDLARLQKAFP----------QGRTLDKDPCTIQEWNEG 107 + +++ + A ++V + L++ G ++ ++ + +G Sbjct: 821 DELLDTILSEQASVLVFTQYVQMARLLEQHLAARGVSSLFLHGGTSVTARESLVRRFQDG 880 Query: 108 KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFV 167 P+ + G GLNL + +V + WW+ Q +R + G R V V Sbjct: 881 DAPVFLLSLKAAGTGLNLTRAEH-VVHYDRWWNPAVEAQATDR-----AYRIGQTRPVQV 934 Query: 168 YYLIAQNTIDELVLQRLRTKSTIQDLLLNALKK 200 + LIA+ TI++ + L K + D +L + + Sbjct: 935 HRLIAEGTIEDRIAALLNCKRELADAVLGSGEA 967 >gi|223935408|ref|ZP_03627325.1| Non-specific serine/threonine protein kinase [bacterium Ellin514] gi|223895818|gb|EEF62262.1| Non-specific serine/threonine protein kinase [bacterium Ellin514] Length = 1184 Score = 124 bits (312), Expect = 6e-27, Method: Composition-based stats. Identities = 44/231 (19%), Positives = 82/231 (35%), Gaps = 45/231 (19%) Query: 5 HKFQRELYCDLQGENIEAFNS-------------------------ASKTVKCLQLANGA 39 + + +LYC+++GE + + + ++ Q++ Sbjct: 945 DRIEEDLYCEMEGEQKTLYRAELKRAQQMLLRVKTQKEFAKERFHFLTSLLRLRQISCHP 1004 Query: 40 VYYDEEKHWKEVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQ-----KAFP--- 89 E K+ AL +E ++V F L L+ K +P Sbjct: 1005 RLVKPESRA---SSAKVDALFEQLEPLVEEGQKVLVFSQFVDMLDILRTDIEAKGWPLFY 1061 Query: 90 -QGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMI 148 G T ++ + + + G GLNL + +V F WW+ Q I Sbjct: 1062 LAGDTENRGELVQRFQATEGAAVFLISLKAGGFGLNLT-AASYVVLFDPWWNPAVENQAI 1120 Query: 149 ERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 +R + G R V Y L+ + +I+E + Q + KS++ D +L K Sbjct: 1121 DR-----THRIGQSRNVIAYRLLIKESIEEKIRQLQKQKSSLADDVLGEEK 1166 >gi|293379105|ref|ZP_06625256.1| SNF2 family N-terminal domain protein [Enterococcus faecium PC4.1] gi|292642246|gb|EFF60405.1| SNF2 family N-terminal domain protein [Enterococcus faecium PC4.1] Length = 705 Score = 124 bits (312), Expect = 6e-27, Method: Composition-based stats. Identities = 39/212 (18%), Positives = 85/212 (40%), Gaps = 26/212 (12%) Query: 3 QYHKFQRELYCDLQGENIEAF-----NSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIK 57 Y + R++ ++ + EAF + + Q+ + E+ + K++ Sbjct: 479 VYLAYLRQMREEISSMDSEAFKKNRIGILAGLTRLRQICCDPRLFIED---YQGGSGKLE 535 Query: 58 ALEVIIEKA--NAAPIIVAYHFNSDLARLQKAFPQ---------GRTLDKDP-CTIQEWN 105 ++ ++ A N +++ F L LQ+ + G T +D + +N Sbjct: 536 QVKDLLVAAKENKRRVLLFSQFTGMLTILQEELAELGISTFYLRGSTKPQDRLSMVDAFN 595 Query: 106 EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 G+ + + G GLNL G + ++ + LWW+ +Q R + G K V Sbjct: 596 AGEKDVFLISLKAGGTGLNLT-GADTVILYDLWWNPAIEEQAAGR-----AHRIGQKNVV 649 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 V+ +I++ TI+E + + K + ++ Sbjct: 650 EVWRMISEGTIEERMDSLQQEKRELFQKVIQG 681 >gi|322517503|ref|ZP_08070375.1| Snf2 family protein [Streptococcus vestibularis ATCC 49124] gi|322123879|gb|EFX95442.1| Snf2 family protein [Streptococcus vestibularis ATCC 49124] Length = 1027 Score = 124 bits (312), Expect = 6e-27, Method: Composition-based stats. Identities = 36/211 (17%), Positives = 76/211 (36%), Gaps = 25/211 (11%) Query: 1 MKQYHKFQRELYCDLQGENIE--AFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKA 58 + Q + Q+ L + I S + Q+ + + + K+ + Sbjct: 807 LAQLQQMQQGLI-SASDQEINRHKVEILSGITRLRQICDTPALFMD----YAGDSGKLDS 861 Query: 59 LEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTL----------DKDPCTIQEWNE 106 L ++ + + +++ F L ++ + D + +N+ Sbjct: 862 LRDLLSQIKESDHRVLIFSQFRGMLDITEELLQEVGISSYKLTGSTPSDSRQEMTKAFNQ 921 Query: 107 GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVF 166 G + G GLNL G + ++ LWW+ Q I R + G ++ V Sbjct: 922 GSRDAFLISLKAGGVGLNLT-GADTVILIDLWWNPAVEMQAISR-----AHRIGQEQNVE 975 Query: 167 VYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 V+ LI + TI+E +L+ K + +L+ Sbjct: 976 VFRLITRGTIEEKILELQEGKKNLVTTVLDG 1006 >gi|222152563|ref|YP_002561738.1| helicase [Streptococcus uberis 0140J] gi|222113374|emb|CAR41006.1| putative helicase [Streptococcus uberis 0140J] Length = 1029 Score = 124 bits (312), Expect = 6e-27, Method: Composition-based stats. Identities = 39/205 (19%), Positives = 72/205 (35%), Gaps = 25/205 (12%) Query: 5 HKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIE 64 + + D+ + IE + + Q+ + + E K++ L ++ Sbjct: 819 DRIKNASDADINRQKIEILSG---ITRLRQICDTPSLFTEYD----GDSGKLECLRTLLL 871 Query: 65 K--ANAAPIIVAYHFNSDLARLQKAFPQ----------GRTLDKDPCTIQEWNEGKIPLL 112 + N ++ F L +K + ++ + +N G Sbjct: 872 QVKENGHRALIFSQFKGMLEIAEKELEEMGLNSYKITGSTPANERQEMTRAFNNGSKDAF 931 Query: 113 FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIA 172 + G GLNL G + +V LWW+ Q I R + G V VY LI Sbjct: 932 LISLKAGGVGLNLT-GADTVVLIDLWWNPAVEMQAISR-----AHRIGQDDNVEVYRLIT 985 Query: 173 QNTIDELVLQRLRTKSTIQDLLLNA 197 + TI+E +L TK + +L+ Sbjct: 986 RGTIEEKILALQETKRNLVTTVLDG 1010 >gi|194016601|ref|ZP_03055215.1| SNF2 family helicase [Bacillus pumilus ATCC 7061] gi|194012074|gb|EDW21642.1| SNF2 family helicase [Bacillus pumilus ATCC 7061] Length = 925 Score = 124 bits (312), Expect = 6e-27, Method: Composition-based stats. Identities = 39/214 (18%), Positives = 82/214 (38%), Gaps = 26/214 (12%) Query: 3 QYHKFQRELY---CDLQGENIEAFNSASKTVKCLQLANG-AVYYDEEKHWKEVHDE--KI 56 Y + ++ + L G +A S + Q+ + A+Y E ++ K+ Sbjct: 694 LYEQLVKDTFEHMASLTGMQRKAI-ILSMLGRLKQICDHPALYLKESGTDVKLLKRSLKM 752 Query: 57 KALEVIIEKAN--AAPIIVAYHFNSDLARLQKA----------FPQGRT-LDKDPCTIQE 103 L +++ + ++ + +++ F G + + Sbjct: 753 DKLAELLKAIHEQGESCLIFTQYIGMGNMIKQLAEKMFGEPVQFLNGSLSKQERDKMVDR 812 Query: 104 WNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKR 163 + + + +L + G GLNL N ++ + WW+ Q +R + G KR Sbjct: 813 FQKKEFNILILSLKAGGTGLNLT-AANHVIHYDRWWNPAVENQATDR-----AYRIGQKR 866 Query: 164 AVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 V V+ +I TI+E + Q L TK T+ D ++ + Sbjct: 867 FVHVHKMITTGTIEEKIDQMLETKQTLNDQIIQS 900 >gi|168209499|ref|ZP_02635124.1| putative helicase [Clostridium perfringens B str. ATCC 3626] gi|170712417|gb|EDT24599.1| putative helicase [Clostridium perfringens B str. ATCC 3626] Length = 1067 Score = 124 bits (312), Expect = 6e-27, Method: Composition-based stats. Identities = 32/190 (16%), Positives = 72/190 (37%), Gaps = 22/190 (11%) Query: 21 EAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKAN--AAPIIVAYHFN 78 + N + K ++ + K+ ++ I++ A+ I++ F Sbjct: 866 DKINLFAYLTKLREICLDPSLVVPDYT---GESSKLTVVKEIVKDASESGKKILLFSQFT 922 Query: 79 SDLARLQKAFPQ-----------GRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQY 127 S L ++++ F + D+ + + I + + G GLNL Sbjct: 923 SVLQKIEEDFKKEDISYLYLDGGTSAKDRVERVKKFNEDSNIKVFLISLKAGGVGLNLT- 981 Query: 128 GGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTK 187 ++++ F WW+ Q +R + G + V V L+A++TI+E ++ K Sbjct: 982 SASVVIHFDPWWNPAVEDQATDR-----AHRFGQENKVEVIKLVAKDTIEEKIVLMQEDK 1036 Query: 188 STIQDLLLNA 197 + L++ Sbjct: 1037 RELIQSLMDG 1046 >gi|157694030|ref|YP_001488492.1| SNF2 family helicase [Bacillus pumilus SAFR-032] gi|157682788|gb|ABV63932.1| SNF2 family helicase [Bacillus pumilus SAFR-032] Length = 925 Score = 124 bits (312), Expect = 7e-27, Method: Composition-based stats. Identities = 39/214 (18%), Positives = 82/214 (38%), Gaps = 26/214 (12%) Query: 3 QYHKFQRELY---CDLQGENIEAFNSASKTVKCLQLANG-AVYYDEEKHWKEVHDE--KI 56 Y + ++ + L G +A S + Q+ + A+Y E ++ K+ Sbjct: 694 LYEQLVKDTFEHMASLTGMQRKAI-ILSMLGRLKQICDHPALYLKESGTDVKLLKRSLKM 752 Query: 57 KALEVIIEKAN--AAPIIVAYHFNSDLARLQKA----------FPQGRT-LDKDPCTIQE 103 L +++ + ++ + +++ F G + + Sbjct: 753 DKLAELLKAIHEQGESCLIFTQYIGMGNMIKQLAEKMFGEPVQFLNGSLSKQERDKMVDR 812 Query: 104 WNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKR 163 + + + +L + G GLNL N ++ + WW+ Q +R + G KR Sbjct: 813 FQKKEFNILILSLKAGGTGLNLT-AANHVIHYDRWWNPAVENQATDR-----AYRIGQKR 866 Query: 164 AVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 V V+ +I TI+E + Q L TK T+ D ++ + Sbjct: 867 FVHVHKMITTGTIEEKIDQMLETKQTLNDQIIQS 900 >gi|294619479|ref|ZP_06698922.1| Snf2 family protein [Enterococcus faecium E1679] gi|291594275|gb|EFF25706.1| Snf2 family protein [Enterococcus faecium E1679] Length = 1064 Score = 124 bits (312), Expect = 7e-27, Method: Composition-based stats. Identities = 36/210 (17%), Positives = 81/210 (38%), Gaps = 22/210 (10%) Query: 1 MKQYHKFQRELY-CDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKAL 59 + + + E+ D + + + Q+ + E+ + K++ + Sbjct: 840 LAYLRQMREEITSMDSEAFKKNRIGILAGLTRLRQICCDPRLFIED---YQGGSGKLEQV 896 Query: 60 EVIIEKA--NAAPIIVAYHFNSDLARLQKAFPQ---------GRTLDKDP-CTIQEWNEG 107 + ++ A N +++ F L LQ+ + G T +D + +N G Sbjct: 897 KDLLVAAKENKRRVLLFSQFTGMLTILQEELAELGISTFYLRGSTKPQDRLSMVDAFNAG 956 Query: 108 KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFV 167 + + + G GLNL G + ++ + LWW+ +Q R + G K V V Sbjct: 957 EKDVFLISLKAGGTGLNLT-GADTVILYDLWWNPAIEEQAAGR-----AHRIGQKNVVEV 1010 Query: 168 YYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + +I++ TI+E + + K + ++ Sbjct: 1011 WRMISEGTIEERMDSLQQEKRELFQKVIQG 1040 >gi|306827970|ref|ZP_07461237.1| Snf2 family protein [Streptococcus pyogenes ATCC 10782] gi|304429889|gb|EFM32931.1| Snf2 family protein [Streptococcus pyogenes ATCC 10782] Length = 1032 Score = 124 bits (312), Expect = 7e-27, Method: Composition-based stats. Identities = 35/205 (17%), Positives = 75/205 (36%), Gaps = 25/205 (12%) Query: 5 HKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIE 64 + + D+ + IE + + Q+ + + + + K+ +L +++ Sbjct: 820 DQIRNSSDVDISRQKIEILSG---ITRLRQICDTPSLFMD----YQGESGKLDSLRILLT 872 Query: 65 K--ANAAPIIVAYHFNSDLARLQKAFP----------QGRTLDKDPCTIQEWNEGKIPLL 112 + N ++ F L ++ ++ + +N G Sbjct: 873 QIKENGHRALIFSQFRGMLDLAKQEMTALGLTSYQMTGSTPANERQEMTRAFNNGSKDAF 932 Query: 113 FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIA 172 + G G+NL G + ++ LWW+ Q I R + G K V VY LI Sbjct: 933 LISLKAGGVGINLT-GADTVILIDLWWNPAVEMQAISR-----AYRIGQKENVEVYRLIT 986 Query: 173 QNTIDELVLQRLRTKSTIQDLLLNA 197 + TI+E +L+ +K + +L+ Sbjct: 987 RGTIEEKILELQESKRNLVTTVLDG 1011 >gi|89897890|ref|YP_515000.1| SWF/SNF family helicase [Chlamydophila felis Fe/C-56] gi|89331262|dbj|BAE80855.1| swi/snf family helicase 2 [Chlamydophila felis Fe/C-56] Length = 1206 Score = 124 bits (312), Expect = 7e-27, Method: Composition-based stats. Identities = 33/204 (16%), Positives = 87/204 (42%), Gaps = 18/204 (8%) Query: 14 DLQGENIEAFNSASKTVKCLQLANG-AVYYDEEKHWKEVHDEKIKALEVIIEK--ANAAP 70 + + + + + Q+ N A+++ ++E K +A ++ A+ Sbjct: 974 SPEEQTVNYLHVFALLNHLKQICNHPAIFFKNPDKYREHESGKWEAFVRLLHDSLASGCK 1033 Query: 71 IIVAYHFNSDLARL---------QKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGH 121 ++V + + + + A QG++L++ + + + + G Sbjct: 1034 VVVFSQYIHMIRIIMLYLEEIGVKYASIQGKSLNRKEEIEYFTTDPECRVFVGSLLAAGT 1093 Query: 122 GLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVL 181 G+NL GN+++ + WW+ + Q ++R+ + G K VF+Y L+ ++T++E + Sbjct: 1094 GINLT-AGNVVIMYDRWWNPAKENQALDRV-----HRIGQKNTVFIYKLMTEDTLEERIH 1147 Query: 182 QRLRTKSTIQDLLLNALKKETIHV 205 + K + D +++ +H+ Sbjct: 1148 YLIEKKIRLLDKVISTQDSNILHM 1171 >gi|332035338|gb|EGI71840.1| Snf2 family protein [Pseudoalteromonas haloplanktis ANT/505] Length = 155 Score = 124 bits (312), Expect = 7e-27, Method: Composition-based stats. Identities = 35/137 (25%), Positives = 57/137 (41%), Gaps = 16/137 (11%) Query: 68 AAPIIVAYHFNSDLARLQKAFPQ---------GRTLDKDPCTIQEWNEGKIPLLFAHPAS 118 II+ F S L + + + G+T +D I E+ GK + + Sbjct: 5 GRKIIIFSQFTSALDLIAQRLEEININFSMLTGQTRQRD-KVIDEFTSGKTSVFLISLKA 63 Query: 119 CGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDE 178 G GLNL + ++ F WW+ +Q +R + G VFVY LI N+I++ Sbjct: 64 GGTGLNLTQ-ADTVIHFDPWWNPAVEKQATDR-----AYRIGQTNPVFVYKLIMSNSIEQ 117 Query: 179 LVLQRLRTKSTIQDLLL 195 V + + K + D L Sbjct: 118 KVFKMQQDKQALVDALF 134 >gi|56808747|ref|ZP_00366465.1| COG0553: Superfamily II DNA/RNA helicases, SNF2 family [Streptococcus pyogenes M49 591] gi|209558846|ref|YP_002285318.1| Putative SNF helicase [Streptococcus pyogenes NZ131] gi|209540047|gb|ACI60623.1| Putative SNF helicase [Streptococcus pyogenes NZ131] Length = 1032 Score = 124 bits (312), Expect = 7e-27, Method: Composition-based stats. Identities = 35/205 (17%), Positives = 75/205 (36%), Gaps = 25/205 (12%) Query: 5 HKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIE 64 + + D+ + IE + + Q+ + + + + K+ +L +++ Sbjct: 820 DQIRNSSDVDISRQKIEILSG---ITRLRQICDTPSLFMD----YQGESGKLDSLRILLT 872 Query: 65 K--ANAAPIIVAYHFNSDLARLQKAFP----------QGRTLDKDPCTIQEWNEGKIPLL 112 + N ++ F L ++ ++ + +N G Sbjct: 873 QIKENGHRALIFSQFRGMLDLAKQEMTALGLTSYQMTGSTPANERQEMTRAFNNGSKDAF 932 Query: 113 FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIA 172 + G G+NL G + ++ LWW+ Q I R + G K V VY LI Sbjct: 933 LISLKAGGVGINLT-GADTVILIDLWWNPAVEMQAISR-----AYRIGQKENVEVYRLIT 986 Query: 173 QNTIDELVLQRLRTKSTIQDLLLNA 197 + TI+E +L+ +K + +L+ Sbjct: 987 RGTIEEKILELQESKRNLVTTVLDG 1011 >gi|257880309|ref|ZP_05659962.1| Snf2 family protein [Enterococcus faecium 1,230,933] gi|257890968|ref|ZP_05670621.1| Snf2 family protein [Enterococcus faecium 1,231,410] gi|257894223|ref|ZP_05673876.1| Snf2 family protein [Enterococcus faecium 1,231,408] gi|257814537|gb|EEV43295.1| Snf2 family protein [Enterococcus faecium 1,230,933] gi|257827328|gb|EEV53954.1| Snf2 family protein [Enterococcus faecium 1,231,410] gi|257830602|gb|EEV57209.1| Snf2 family protein [Enterococcus faecium 1,231,408] Length = 1067 Score = 124 bits (312), Expect = 7e-27, Method: Composition-based stats. Identities = 36/210 (17%), Positives = 81/210 (38%), Gaps = 22/210 (10%) Query: 1 MKQYHKFQRELY-CDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKAL 59 + + + E+ D + + + Q+ + E+ + K++ + Sbjct: 843 LAYLRQMREEITSMDSEAFKKNRIGILAGLTRLRQICCDPRLFIED---YQGGSGKLEQV 899 Query: 60 EVIIEKA--NAAPIIVAYHFNSDLARLQKAFPQ---------GRTLDKDP-CTIQEWNEG 107 + ++ A N +++ F L LQ+ + G T +D + +N G Sbjct: 900 KDLLVAAKENKRRVLLFSQFTGMLTILQEELAELGISTFYLRGSTKPQDRLSMVDAFNAG 959 Query: 108 KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFV 167 + + + G GLNL G + ++ + LWW+ +Q R + G K V V Sbjct: 960 EKDVFLISLKAGGTGLNLT-GADTVILYDLWWNPAIEEQAAGR-----AHRIGQKNVVEV 1013 Query: 168 YYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + +I++ TI+E + + K + ++ Sbjct: 1014 WRMISEGTIEERMDSLQQEKRELFQKVIQG 1043 >gi|312864084|ref|ZP_07724320.1| SNF2 family N-terminal domain protein [Streptococcus vestibularis F0396] gi|311100497|gb|EFQ58704.1| SNF2 family N-terminal domain protein [Streptococcus vestibularis F0396] Length = 1031 Score = 124 bits (312), Expect = 7e-27, Method: Composition-based stats. Identities = 36/211 (17%), Positives = 76/211 (36%), Gaps = 25/211 (11%) Query: 1 MKQYHKFQRELYCDLQGENIE--AFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKA 58 + Q + Q+ L + I S + Q+ + + + K+ + Sbjct: 811 LAQLQQMQQGLI-SASDQEINRHKVEILSGITRLRQICDTPALFMD----YAGDSGKLDS 865 Query: 59 LEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTL----------DKDPCTIQEWNE 106 L ++ + + +++ F L ++ + D + +N+ Sbjct: 866 LRDLLSQIKESDHRVLIFSQFRGMLDITEELLQEVGISSYKLTGSTPSDSRQEMTKAFNQ 925 Query: 107 GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVF 166 G + G GLNL G + ++ LWW+ Q I R + G ++ V Sbjct: 926 GSRDAFLISLKAGGVGLNLT-GADTVILIDLWWNPAVEMQAISR-----AHRIGQEQNVE 979 Query: 167 VYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 V+ LI + TI+E +L+ K + +L+ Sbjct: 980 VFRLITRGTIEEKILELQEGKKNLVTTVLDG 1010 >gi|21909786|ref|NP_664054.1| putative SNF helicase [Streptococcus pyogenes MGAS315] gi|28896521|ref|NP_802871.1| SNF helicase [Streptococcus pyogenes SSI-1] gi|21903971|gb|AAM78857.1| putative SNF helicase [Streptococcus pyogenes MGAS315] gi|28811775|dbj|BAC64704.1| putative SNF helicase [Streptococcus pyogenes SSI-1] Length = 1032 Score = 124 bits (312), Expect = 7e-27, Method: Composition-based stats. Identities = 35/205 (17%), Positives = 75/205 (36%), Gaps = 25/205 (12%) Query: 5 HKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIE 64 + + D+ + IE + + Q+ + + + + K+ +L +++ Sbjct: 820 DQIRNSSDVDISRQKIEILSG---ITRLRQICDTPSLFMD----YQGESGKLDSLRILLT 872 Query: 65 K--ANAAPIIVAYHFNSDLARLQKAFP----------QGRTLDKDPCTIQEWNEGKIPLL 112 + N ++ F L ++ ++ + +N G Sbjct: 873 QIKENGHRALIFSQFRGMLDLAKQEMTALGLTSYQMTGSTPANERQEMTRAFNNGSKDAF 932 Query: 113 FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIA 172 + G G+NL G + ++ LWW+ Q I R + G K V VY LI Sbjct: 933 LISLKAGGVGINLT-GADTVILIDLWWNPAVEMQAISR-----AYRIGQKENVEVYRLIT 986 Query: 173 QNTIDELVLQRLRTKSTIQDLLLNA 197 + TI+E +L+ +K + +L+ Sbjct: 987 RGTIEEKILELQESKRNLVTTVLDG 1011 >gi|158261765|dbj|BAF83060.1| unnamed protein product [Homo sapiens] Length = 1307 Score = 124 bits (312), Expect = 7e-27, Method: Composition-based stats. Identities = 35/176 (19%), Positives = 72/176 (40%), Gaps = 21/176 (11%) Query: 44 EEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQ----------- 90 K K+ AL+V++ + + +++ + L++ Sbjct: 1091 PGKESLITDSGKLYALDVLLTRLKSQGHRVLIYSQMTRMIDLLEEYMVYRKHTYMRLDGS 1150 Query: 91 GRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 + ++ N I + + G G+NL + ++F+ W+ QQ ++R Sbjct: 1151 SKISERRDMVADFQNRNDIFVFLLSTRAGGLGINLT-AADTVIFYDSDWNPTVDQQAMDR 1209 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA--LKKETIH 204 + G + V VY LI + TI+E +LQR + KS IQ ++++ K +T+ Sbjct: 1210 -----AHRLGQTKQVTVYRLICKGTIEERILQRAKEKSEIQRMVISGGNFKPDTLK 1260 >gi|50913662|ref|YP_059634.1| SWF/SNF family helicase [Streptococcus pyogenes MGAS10394] gi|50902736|gb|AAT86451.1| SWF/SNF family helicase [Streptococcus pyogenes MGAS10394] Length = 1032 Score = 124 bits (312), Expect = 7e-27, Method: Composition-based stats. Identities = 35/205 (17%), Positives = 75/205 (36%), Gaps = 25/205 (12%) Query: 5 HKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIE 64 + + D+ + IE + + Q+ + + + + K+ +L +++ Sbjct: 820 DQIRNSSDVDISRQKIEILSG---ITRLRQICDTPSLFMD----YQGESGKLDSLRILLT 872 Query: 65 K--ANAAPIIVAYHFNSDLARLQKAFP----------QGRTLDKDPCTIQEWNEGKIPLL 112 + N ++ F L ++ ++ + +N G Sbjct: 873 QIKENGHRALIFSQFRGMLDLAKQEMTALGLTSYQMTGSTPANERQEMTRAFNNGSKDAF 932 Query: 113 FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIA 172 + G G+NL G + ++ LWW+ Q I R + G K V VY LI Sbjct: 933 LISLKAGGVGINLT-GADTVILIDLWWNPAVEMQAISR-----AYRIGQKENVEVYRLIT 986 Query: 173 QNTIDELVLQRLRTKSTIQDLLLNA 197 + TI+E +L+ +K + +L+ Sbjct: 987 RGTIEEKILELQESKRNLVTTVLDG 1011 >gi|282898428|ref|ZP_06306418.1| SNF2-related helicase [Raphidiopsis brookii D9] gi|281196594|gb|EFA71500.1| SNF2-related helicase [Raphidiopsis brookii D9] Length = 1427 Score = 124 bits (312), Expect = 7e-27, Method: Composition-based stats. Identities = 31/210 (14%), Positives = 74/210 (35%), Gaps = 25/210 (11%) Query: 4 YHKFQRELYCDLQGENIEA----FNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKAL 59 Y +R+ L + + ++ ++ + + + K++ L Sbjct: 1208 YEALRRQAISKLNESDADPGRKHLQVLAEIMRLRRACCSPSLVMPD---INLSSSKLQLL 1264 Query: 60 EVIIEKA--NAAPIIVAYHFNSDLARLQKAFPQGRTLD----------KDPCTIQEWNEG 107 ++ + N +V F L ++ + + ++ + G Sbjct: 1265 GELLAELLENHHKALVFSQFVDHLHIIRNYLERKSIKYQYLDGSTPMAERKRSVDSFQAG 1324 Query: 108 KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFV 167 + + G GLNL + ++ WW+ Q +R + G +R V + Sbjct: 1325 DGDVFLISLKAGGTGLNLT-AADYVIHTDPWWNPAVEDQASDR-----AHRIGQERPVTI 1378 Query: 168 YYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 Y L+A++TI++ +++ K + D LL Sbjct: 1379 YRLVAKDTIEDKIVELHHHKRDLADTLLEG 1408 >gi|168216008|ref|ZP_02641633.1| putative helicase [Clostridium perfringens NCTC 8239] gi|182381656|gb|EDT79135.1| putative helicase [Clostridium perfringens NCTC 8239] Length = 1065 Score = 124 bits (312), Expect = 7e-27, Method: Composition-based stats. Identities = 33/190 (17%), Positives = 72/190 (37%), Gaps = 22/190 (11%) Query: 21 EAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKAN--AAPIIVAYHFN 78 + N S K ++ + K+ ++ I++ A+ I++ F Sbjct: 864 DKINLFSYLTKLREICLDPSLVVPDYT---GGSSKLTVVKEIVKDASESGKKILLFSQFT 920 Query: 79 SDLARLQKAFPQ-----------GRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQY 127 S L ++++ F + D+ + + I + + G GLNL Sbjct: 921 SVLQKIEEDFKKEDISYLYLDGGTSAKDRVERVKKFNEDSNIKVFLISLKAGGVGLNLT- 979 Query: 128 GGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTK 187 ++++ F WW+ Q +R + G + V V L+A++TI+E ++ K Sbjct: 980 SASVVIHFDPWWNPAVEDQATDR-----AHRFGQENKVEVIKLVAKDTIEEKIVLMQEDK 1034 Query: 188 STIQDLLLNA 197 + L++ Sbjct: 1035 RELIQSLMDG 1044 >gi|168206269|ref|ZP_02632274.1| putative helicase [Clostridium perfringens E str. JGS1987] gi|170662244|gb|EDT14927.1| putative helicase [Clostridium perfringens E str. JGS1987] Length = 1067 Score = 124 bits (312), Expect = 7e-27, Method: Composition-based stats. Identities = 37/190 (19%), Positives = 77/190 (40%), Gaps = 22/190 (11%) Query: 21 EAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKAN--AAPIIVAYHFN 78 + N + K ++ + K+ ++ I++ A+ I++ F Sbjct: 866 DKINLFAYLTKLREICLDPSLVVPDYT---GESSKLTVVKEIVKDASESGKKILLFSQFT 922 Query: 79 SDLARLQKAFPQ---------GRTLDKDP-CTIQEWNEG-KIPLLFAHPASCGHGLNLQY 127 S L ++++ F + G T KD ++ +NE I + + G GLNL Sbjct: 923 SVLKKIEEDFKKEDISYLYLDGGTYAKDRVEIVKNFNEDSNIKVFLISLKAGGVGLNLT- 981 Query: 128 GGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTK 187 ++++ F WW+ Q +R + G + V V L+A++TI+E ++ K Sbjct: 982 SASVVIHFDPWWNPAVEDQATDR-----AHRFGQENKVEVIKLVAKDTIEEKIVLMQEDK 1036 Query: 188 STIQDLLLNA 197 + L++ Sbjct: 1037 RELIQSLMDG 1046 >gi|69247670|ref|ZP_00604446.1| SNF2-related:Helicase, C-terminal:SWIM Zn-finger:DEAD/DEAH box helicase, N-terminal [Enterococcus faecium DO] gi|257882164|ref|ZP_05661817.1| Snf2 family protein [Enterococcus faecium 1,231,502] gi|258614743|ref|ZP_05712513.1| Snf2 family protein [Enterococcus faecium DO] gi|260562387|ref|ZP_05832901.1| Snf2 family protein [Enterococcus faecium C68] gi|293559937|ref|ZP_06676447.1| Snf2 family protein [Enterococcus faecium E1162] gi|294621010|ref|ZP_06700206.1| Snf2 family protein [Enterococcus faecium U0317] gi|314937677|ref|ZP_07845002.1| protein, SNF2 family [Enterococcus faecium TX0133a04] gi|314940927|ref|ZP_07847833.1| protein, SNF2 family [Enterococcus faecium TX0133C] gi|314948052|ref|ZP_07851454.1| protein, SNF2 family [Enterococcus faecium TX0082] gi|314952331|ref|ZP_07855341.1| protein, SNF2 family [Enterococcus faecium TX0133A] gi|314991945|ref|ZP_07857400.1| protein, SNF2 family [Enterococcus faecium TX0133B] gi|314995203|ref|ZP_07860317.1| protein, SNF2 family [Enterococcus faecium TX0133a01] gi|68194742|gb|EAN09222.1| SNF2-related:Helicase, C-terminal:SWIM Zn-finger:DEAD/DEAH box helicase, N-terminal [Enterococcus faecium DO] gi|257817822|gb|EEV45150.1| Snf2 family protein [Enterococcus faecium 1,231,502] gi|260073311|gb|EEW61652.1| Snf2 family protein [Enterococcus faecium C68] gi|291599410|gb|EFF30431.1| Snf2 family protein [Enterococcus faecium U0317] gi|291606102|gb|EFF35526.1| Snf2 family protein [Enterococcus faecium E1162] gi|313590612|gb|EFR69457.1| protein, SNF2 family [Enterococcus faecium TX0133a01] gi|313593529|gb|EFR72374.1| protein, SNF2 family [Enterococcus faecium TX0133B] gi|313595546|gb|EFR74391.1| protein, SNF2 family [Enterococcus faecium TX0133A] gi|313600285|gb|EFR79128.1| protein, SNF2 family [Enterococcus faecium TX0133C] gi|313642950|gb|EFS07530.1| protein, SNF2 family [Enterococcus faecium TX0133a04] gi|313645468|gb|EFS10048.1| protein, SNF2 family [Enterococcus faecium TX0082] Length = 1064 Score = 124 bits (312), Expect = 7e-27, Method: Composition-based stats. Identities = 36/210 (17%), Positives = 81/210 (38%), Gaps = 22/210 (10%) Query: 1 MKQYHKFQRELY-CDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKAL 59 + + + E+ D + + + Q+ + E+ + K++ + Sbjct: 840 LAYLRQMREEITSMDSEAFKKNRIGILAGLTRLRQICCDPRLFIED---YQGGSGKLEQV 896 Query: 60 EVIIEKA--NAAPIIVAYHFNSDLARLQKAFPQ---------GRTLDKDP-CTIQEWNEG 107 + ++ A N +++ F L LQ+ + G T +D + +N G Sbjct: 897 KDLLVAAKENKRRVLLFSQFTGMLTILQEELAELGISTFYLRGSTKPQDRLSMVDAFNAG 956 Query: 108 KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFV 167 + + + G GLNL G + ++ + LWW+ +Q R + G K V V Sbjct: 957 EKDVFLISLKAGGTGLNLT-GADTVILYDLWWNPAIEEQAAGR-----AHRIGQKNVVEV 1010 Query: 168 YYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + +I++ TI+E + + K + ++ Sbjct: 1011 WRMISEGTIEERMDSLQQEKRELFQKVIQG 1040 >gi|295396955|ref|ZP_06807077.1| Snf2 family helicase [Aerococcus viridans ATCC 11563] gi|294974808|gb|EFG50513.1| Snf2 family helicase [Aerococcus viridans ATCC 11563] Length = 1051 Score = 124 bits (312), Expect = 7e-27, Method: Composition-based stats. Identities = 34/183 (18%), Positives = 69/183 (37%), Gaps = 21/183 (11%) Query: 26 ASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDL-- 81 + + Q+ K+ K + ++++++A + ++V F S L Sbjct: 853 LAGITRLRQICCHPRLV---KNDYTGQSGKFEYFKIMLKRAIQSGRKVLVFSQFTSMLDV 909 Query: 82 -------ARLQKAFPQGRTLDK-DPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILV 133 + G+T K + E+N G + + G G+NL G + + Sbjct: 910 MSEYLAEEGIDYYMMTGQTNKKIRQEQVDEFNTGDKSVFLISLRAGGVGINLT-GADTIF 968 Query: 134 FFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDL 193 + LWW+ +Q I R + G K V V I + TI++ + + K + + Sbjct: 969 LYDLWWNPAVEEQAIGR-----AHRIGQKNDVEVVRFITEGTIEQRIAELQEEKRYLFEQ 1023 Query: 194 LLN 196 L + Sbjct: 1024 LFD 1026 >gi|293568350|ref|ZP_06679673.1| Snf2 family protein [Enterococcus faecium E1071] gi|291588959|gb|EFF20784.1| Snf2 family protein [Enterococcus faecium E1071] Length = 1064 Score = 124 bits (312), Expect = 7e-27, Method: Composition-based stats. Identities = 36/210 (17%), Positives = 81/210 (38%), Gaps = 22/210 (10%) Query: 1 MKQYHKFQRELY-CDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKAL 59 + + + E+ D + + + Q+ + E+ + K++ + Sbjct: 840 LAYLRQMREEITSMDSEAFKKNRIGILAGLTRLRQICCDPRLFIED---YQGGSGKLEQV 896 Query: 60 EVIIEKA--NAAPIIVAYHFNSDLARLQKAFPQ---------GRTLDKDP-CTIQEWNEG 107 + ++ A N +++ F L LQ+ + G T +D + +N G Sbjct: 897 KDLLVAAKENKRRVLLFSQFTGMLTILQEELAELGISTFYLRGSTKPQDRLSMVDAFNAG 956 Query: 108 KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFV 167 + + + G GLNL G + ++ + LWW+ +Q R + G K V V Sbjct: 957 EKDVFLISLKAGGTGLNLT-GADTVILYDLWWNPAIEEQAAGR-----AHRIGQKNVVEV 1010 Query: 168 YYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + +I++ TI+E + + K + ++ Sbjct: 1011 WRMISEGTIEERMDSLQQEKRELFQKVIQG 1040 >gi|139474374|ref|YP_001129090.1| putative helicase [Streptococcus pyogenes str. Manfredo] gi|134272621|emb|CAM30888.1| putative helicase [Streptococcus pyogenes str. Manfredo] Length = 1032 Score = 124 bits (312), Expect = 7e-27, Method: Composition-based stats. Identities = 35/205 (17%), Positives = 75/205 (36%), Gaps = 25/205 (12%) Query: 5 HKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIE 64 + + D+ + IE + + Q+ + + + + K+ +L +++ Sbjct: 820 DQIRNSSDVDISRQKIEILSG---ITRLRQICDTPSLFMD----YQGESGKLDSLRILLT 872 Query: 65 K--ANAAPIIVAYHFNSDLARLQKAFP----------QGRTLDKDPCTIQEWNEGKIPLL 112 + N ++ F L ++ ++ + +N G Sbjct: 873 QIKENGHRALIFSQFRGMLDLAKQEMTALGLTSYQMTGSTPANERQEMTRAFNNGSKDAF 932 Query: 113 FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIA 172 + G G+NL G + ++ LWW+ Q I R + G K V VY LI Sbjct: 933 LISLKAGGVGINLT-GADTVILIDLWWNPAVEMQAISR-----AYRIGQKENVEVYRLIT 986 Query: 173 QNTIDELVLQRLRTKSTIQDLLLNA 197 + TI+E +L+ +K + +L+ Sbjct: 987 RGTIEEKILELQESKRNLVTTVLDG 1011 >gi|15615476|ref|NP_243779.1| SNF2 helicase [Bacillus halodurans C-125] gi|10175535|dbj|BAB06632.1| SNF2 helicase [Bacillus halodurans C-125] Length = 995 Score = 124 bits (312), Expect = 7e-27, Method: Composition-based stats. Identities = 37/216 (17%), Positives = 77/216 (35%), Gaps = 22/216 (10%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASK--TVKCLQLANGAVYYDEEKHWKEVHDEKIKAL 59 Y + L + K Q+ N ++ ++K+ EK + L Sbjct: 771 ALYQAVVDNMVHQLGDVTHMERRALILKTLTKLKQICNHPAHFLKDKNVDAHQSEKWELL 830 Query: 60 EVIIEKANAA--PIIVAYHFNSDLARLQKAFPQ------------GRTLDKDPCTIQEWN 105 + E+ +++ F +Q AF + + N Sbjct: 831 LTLSEQIMDRQEKMLIFTQFKEMGHLMQDAFQSQIGTPIPFLHGSLSRQQRQEAVERFQN 890 Query: 106 EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 + ++P+ + G GLNL N ++ + WW+ Q +R + G V Sbjct: 891 DRELPIFILSLKAGGVGLNLT-AANHVIHYDRWWNPAVENQATDR-----AYRIGQTADV 944 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 V+ L+ + T++E + Q L +K + + +L A + + Sbjct: 945 TVHKLMTEGTLEERIHQMLESKQALAEQILTAGENQ 980 >gi|293553056|ref|ZP_06673698.1| Snf2 family protein [Enterococcus faecium E1039] gi|291602765|gb|EFF32975.1| Snf2 family protein [Enterococcus faecium E1039] Length = 1064 Score = 124 bits (311), Expect = 7e-27, Method: Composition-based stats. Identities = 36/210 (17%), Positives = 81/210 (38%), Gaps = 22/210 (10%) Query: 1 MKQYHKFQRELY-CDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKAL 59 + + + E+ D + + + Q+ + E+ + K++ + Sbjct: 840 LAYLRQMREEITSMDSEAFKKNRIGILAGLTRLRQICCDPRLFIED---YQGGSGKLEQV 896 Query: 60 EVIIEKA--NAAPIIVAYHFNSDLARLQKAFPQ---------GRTLDKDP-CTIQEWNEG 107 + ++ A N +++ F L LQ+ + G T +D + +N G Sbjct: 897 KDLLVAAKENKRRVLLFSQFTGMLTILQEELAELGISTFYLRGSTKPQDRLSMVDAFNAG 956 Query: 108 KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFV 167 + + + G GLNL G + ++ + LWW+ +Q R + G K V V Sbjct: 957 EKDVFLISLKAGGTGLNLT-GADTVILYDLWWNPAIEEQAAGR-----AHRIGQKNVVEV 1010 Query: 168 YYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + +I++ TI+E + + K + ++ Sbjct: 1011 WRMISEGTIEERMDSLQQEKRELFQKVIQG 1040 >gi|257885356|ref|ZP_05665009.1| Snf2 family protein [Enterococcus faecium 1,231,501] gi|257821212|gb|EEV48342.1| Snf2 family protein [Enterococcus faecium 1,231,501] Length = 1064 Score = 124 bits (311), Expect = 8e-27, Method: Composition-based stats. Identities = 36/210 (17%), Positives = 81/210 (38%), Gaps = 22/210 (10%) Query: 1 MKQYHKFQRELY-CDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKAL 59 + + + E+ D + + + Q+ + E+ + K++ + Sbjct: 840 LAYLRQMREEITSMDSEAFKKNRIGILAGLTRLRQICCDPRLFIED---YQGGSGKLEQV 896 Query: 60 EVIIEKA--NAAPIIVAYHFNSDLARLQKAFPQ---------GRTLDKDP-CTIQEWNEG 107 + ++ A N +++ F L LQ+ + G T +D + +N G Sbjct: 897 KDLLVAAKENKRRVLLFSQFTGMLTILQEELAELGISTFYLRGSTKPQDRLSMVDAFNAG 956 Query: 108 KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFV 167 + + + G GLNL G + ++ + LWW+ +Q R + G K V V Sbjct: 957 EKDVFLISLKAGGTGLNLT-GADTVILYDLWWNPAIEEQAAGR-----AHRIGQKNVVEV 1010 Query: 168 YYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + +I++ TI+E + + K + ++ Sbjct: 1011 WRMISEGTIEERMDSLQQEKRELFQKVIQG 1040 >gi|71902946|ref|YP_279749.1| phage-related DNA helicase [Streptococcus pyogenes MGAS6180] gi|71802041|gb|AAX71394.1| phage-related DNA helicase [Streptococcus pyogenes MGAS6180] Length = 1032 Score = 124 bits (311), Expect = 8e-27, Method: Composition-based stats. Identities = 35/205 (17%), Positives = 75/205 (36%), Gaps = 25/205 (12%) Query: 5 HKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIE 64 + + D+ + IE + + Q+ + + + + K+ +L +++ Sbjct: 820 DQIRNSSDVDISRQKIEILSG---ITRLRQICDTPSLFMD----YQGKSGKLDSLRILLT 872 Query: 65 K--ANAAPIIVAYHFNSDLARLQKAFP----------QGRTLDKDPCTIQEWNEGKIPLL 112 + N ++ F L ++ ++ + +N G Sbjct: 873 QIKENGHRALIFSQFRGMLDLAKQEMTALGLTSYQMTGSTPANERQEMTRAFNNGSKDAF 932 Query: 113 FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIA 172 + G G+NL G + ++ LWW+ Q I R + G K V VY LI Sbjct: 933 LISLKAGGVGINLT-GADTVILIDLWWNPAVEMQAISR-----AYRIGQKENVEVYRLIT 986 Query: 173 QNTIDELVLQRLRTKSTIQDLLLNA 197 + TI+E +L+ +K + +L+ Sbjct: 987 RGTIEEKILELQESKRNLVTTVLDG 1011 >gi|134288423|ref|YP_001110586.1| SNF2-related protein [Burkholderia vietnamiensis G4] gi|134133073|gb|ABO59783.1| SNF2-related protein [Burkholderia vietnamiensis G4] Length = 948 Score = 124 bits (311), Expect = 8e-27, Method: Composition-based stats. Identities = 37/199 (18%), Positives = 77/199 (38%), Gaps = 19/199 (9%) Query: 9 RELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKA-- 66 RE D +G S+ +K Q+ E+ ++ K++ L ++ + Sbjct: 722 REAVAD-RGLGRSTITVLSQILKLRQVCCDPRLLRLEQSEQKKPSAKLEYLMNMLRELLG 780 Query: 67 NAAPIIVAYHFNSDLARLQKAFPQ---------GRTLDKDPCTIQEWNEGKIPLLFAHPA 117 + ++V F + + + G T + D + + ++PLL Sbjct: 781 DGRRVVVFSAFLTMVDIIADRLRDDQVEFEVITGETQNTDRA-KERFQNQEVPLLLCTLK 839 Query: 118 SCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 G G NL + ++ + WW+ Q ++R + G +A+FVY LI +I+ Sbjct: 840 VGGVGHNLT-AADTVILYDPWWNPAAENQAMDR-----AHRIGQTKALFVYKLIMAGSIE 893 Query: 178 ELVLQRLRTKSTIQDLLLN 196 E ++ K + +L+ Sbjct: 894 ERIVAMQERKDALMKAILD 912 >gi|71910102|ref|YP_281652.1| SWF/SNF family helicase [Streptococcus pyogenes MGAS5005] gi|71852884|gb|AAZ50907.1| SWF/SNF family helicase [Streptococcus pyogenes MGAS5005] Length = 1032 Score = 124 bits (311), Expect = 8e-27, Method: Composition-based stats. Identities = 35/205 (17%), Positives = 75/205 (36%), Gaps = 25/205 (12%) Query: 5 HKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIE 64 + + D+ + IE + + Q+ + + + + K+ +L +++ Sbjct: 820 DQIRNSSDVDISRQKIEILSG---ITRLRQICDTPSLFMD----YQGKSGKLDSLRILLT 872 Query: 65 K--ANAAPIIVAYHFNSDLARLQKAFP----------QGRTLDKDPCTIQEWNEGKIPLL 112 + N ++ F L ++ ++ + +N G Sbjct: 873 QIKENGHRALIFSQFRGMLDLAKQEMTALGLTSYQMTGSTPANERQEMTRAFNNGSKDAF 932 Query: 113 FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIA 172 + G G+NL G + ++ LWW+ Q I R + G K V VY LI Sbjct: 933 LISLKAGGVGINLT-GADTVILIDLWWNPAVEMQAISR-----AYRIGQKENVEVYRLIT 986 Query: 173 QNTIDELVLQRLRTKSTIQDLLLNA 197 + TI+E +L+ +K + +L+ Sbjct: 987 RGTIEEKILELQESKRNLVTTVLDG 1011 >gi|257888157|ref|ZP_05667810.1| Snf2 family protein [Enterococcus faecium 1,141,733] gi|257824211|gb|EEV51143.1| Snf2 family protein [Enterococcus faecium 1,141,733] Length = 1067 Score = 124 bits (311), Expect = 8e-27, Method: Composition-based stats. Identities = 39/212 (18%), Positives = 85/212 (40%), Gaps = 26/212 (12%) Query: 3 QYHKFQRELYCDLQGENIEAF-----NSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIK 57 Y + R++ ++ + EAF + + Q+ + E+ + K++ Sbjct: 841 VYLAYLRQMREEISSMDSEAFKKNRIGILAGLTRLRQICCDPRLFIED---YQGGSGKLE 897 Query: 58 ALEVIIEKA--NAAPIIVAYHFNSDLARLQKAFPQ---------GRTLDKDP-CTIQEWN 105 ++ ++ A N +++ F L LQ+ + G T +D + +N Sbjct: 898 QVKDLLVAAKENKRRVLLFSQFTGMLTILQEELAELGISTFYLRGSTKPQDRLSMVDAFN 957 Query: 106 EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 G+ + + G GLNL G + ++ + LWW+ +Q R + G K V Sbjct: 958 AGEKDVFLISLKAGGTGLNLT-GADTVILYDLWWNPAIEEQAAGR-----AHRIGQKNVV 1011 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 V+ +I++ TI+E + + K + ++ Sbjct: 1012 EVWRMISEGTIEERMDSLQQEKRELFQKVIQG 1043 >gi|149200413|ref|ZP_01877429.1| DEAD/DEAH box helicase-like protein [Lentisphaera araneosa HTCC2155] gi|149136482|gb|EDM24919.1| DEAD/DEAH box helicase-like protein [Lentisphaera araneosa HTCC2155] Length = 1041 Score = 124 bits (311), Expect = 8e-27, Method: Composition-based stats. Identities = 42/211 (19%), Positives = 82/211 (38%), Gaps = 23/211 (10%) Query: 2 KQYHKFQRELYCDLQGENIE----AFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIK 57 K Y + + Q ++ E N + + Q+ +E+ ++ + KI Sbjct: 822 KIYREMHAYYSQEKQKDDKETPGGKGNMLAALTRLRQVVCHPYLVNED--YRHIESAKIN 879 Query: 58 ALEVIIEK--ANAAPIIVAYHFNSDLARLQKAF---------PQGRTLDKDPCTIQEWNE 106 L +E+ A+ A ++ F L +++A G T D+ + Sbjct: 880 LLISQLEQVFASGAKALIFSQFTQFLDLIEEAIQMNKWNYTRLDGSTKDRQVPVQEFNEN 939 Query: 107 GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVF 166 K + G GLNL + + WW+ Q I+R + G ++AV Sbjct: 940 EKCRFFLISLKAGGTGLNLTQAQYVYIM-DPWWNPAAESQAIDR-----AYRIGQEKAVS 993 Query: 167 VYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 Y ++A++TI++ +LQ KS + ++ A Sbjct: 994 AYRIVAKDTIEDKLLQLQAEKSQLVQDVVEA 1024 >gi|15674499|ref|NP_268673.1| putative SNF helicase [Streptococcus pyogenes M1 GAS] gi|13621600|gb|AAK33394.1| putative SNF helicase [Streptococcus pyogenes M1 GAS] Length = 1032 Score = 124 bits (311), Expect = 8e-27, Method: Composition-based stats. Identities = 35/205 (17%), Positives = 75/205 (36%), Gaps = 25/205 (12%) Query: 5 HKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIE 64 + + D+ + IE + + Q+ + + + + K+ +L +++ Sbjct: 820 DQIRNSSDVDISRQKIEILSG---ITRLRQICDTPSLFMD----YQGKSGKLDSLRILLT 872 Query: 65 K--ANAAPIIVAYHFNSDLARLQKAFP----------QGRTLDKDPCTIQEWNEGKIPLL 112 + N ++ F L ++ ++ + +N G Sbjct: 873 QIKENGHRALIFSQFRGMLDLAKQEMTALGLTSYQMTGSTPANERQEMTRAFNNGSKDAF 932 Query: 113 FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIA 172 + G G+NL G + ++ LWW+ Q I R + G K V VY LI Sbjct: 933 LISLKAGGVGINLT-GADTVILIDLWWNPAVEMQAISR-----AYRIGQKENVEVYRLIT 986 Query: 173 QNTIDELVLQRLRTKSTIQDLLLNA 197 + TI+E +L+ +K + +L+ Sbjct: 987 RGTIEEKILELQESKRNLVTTVLDG 1011 >gi|328543336|ref|YP_004303445.1| Helicase domain protein [Polymorphum gilvum SL003B-26A1] gi|326413081|gb|ADZ70144.1| Helicase domain protein [Polymorphum gilvum SL003B-26A1] Length = 481 Score = 124 bits (311), Expect = 8e-27, Method: Composition-based stats. Identities = 45/209 (21%), Positives = 83/209 (39%), Gaps = 24/209 (11%) Query: 2 KQYHKFQRELYCDLQGENIE-----AFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKI 56 + Y K + E+ C+++ + E A + +K + +QLA E E K Sbjct: 253 RLYDKMRDEMVCEIEAMSGEQYRAYASTALAKLTRLVQLACNPSLIFPE---AEGTPAKF 309 Query: 57 KALEVIIE---KANAAPIIVAYHFNSDLARLQKAFPQGRTL-------DKDPCTIQEWNE 106 +AL+ +IE +I+ ++ + L P + ++ + Sbjct: 310 EALDGVIEDILSVPGRKVILWSNYIRTIETLLARIPGAVAIYGGTPTSERQEIAASFQQD 369 Query: 107 GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVF 166 + +L A+PA+ G G L + ++ SL W + + Q R + G V Sbjct: 370 PDVRVLIANPAAAGTGFTLT-AASFTIYESLSWRYDHYAQ-----SQDRNHRIGQTEPVT 423 Query: 167 VYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 LIA +TI+E ++ L KS + LL Sbjct: 424 YLRLIAADTIEEAIVVALERKSALARTLL 452 >gi|312885408|ref|ZP_07745049.1| SNF2-related protein [Mucilaginibacter paludis DSM 18603] gi|311302106|gb|EFQ79134.1| SNF2-related protein [Mucilaginibacter paludis DSM 18603] Length = 1110 Score = 124 bits (311), Expect = 8e-27, Method: Composition-based stats. Identities = 43/205 (20%), Positives = 72/205 (35%), Gaps = 19/205 (9%) Query: 3 QYHKFQRELYCDLQGENIEAF--NSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKAL- 59 Y K RE C + + N K Q+ + + EK KI L Sbjct: 891 AYEKEFREYICATSNKELAKSPINVLRGLTKLRQICDSPMLLSGEKLP-GDESAKIATLM 949 Query: 60 EVIIEKANAAPIIVAYHFNSDLARLQK---------AFPQGRTLDKDPCTIQEWNEGKIP 110 E I K I+V F S L ++K A+ G T ++ N Sbjct: 950 EEITGKMANHKILVFSQFVSMLDLIKKELHQRNISFAYLTGSTRNRQKVVEDFQNNSATR 1009 Query: 111 LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYL 170 + + G GLNL + + WW+ Q I+R + G + + L Sbjct: 1010 VFLISLKAGGTGLNLTE-ADYVYLVDPWWNPAVENQAIDR-----SHRIGQNKNIVAVRL 1063 Query: 171 IAQNTIDELVLQRLRTKSTIQDLLL 195 I T++E +++ +K + + L+ Sbjct: 1064 ICPGTVEEKMMKVQSSKRELVNDLI 1088 >gi|110800073|ref|YP_695594.1| putative helicase [Clostridium perfringens ATCC 13124] gi|110674720|gb|ABG83707.1| putative helicase [Clostridium perfringens ATCC 13124] Length = 1069 Score = 124 bits (311), Expect = 8e-27, Method: Composition-based stats. Identities = 32/190 (16%), Positives = 72/190 (37%), Gaps = 22/190 (11%) Query: 21 EAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKAN--AAPIIVAYHFN 78 + N + K ++ + K+ ++ I++ A+ I++ F Sbjct: 868 DKINLFAYLTKLREICLDPSLVVPDYT---GESSKLTVVKEIVKDASESGKKILLFSQFT 924 Query: 79 SDLARLQKAFPQ-----------GRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQY 127 S L ++++ F + D+ + + I + + G GLNL Sbjct: 925 SVLQKIEEDFKKEDISYLYLDGGTSAKDRVERVKKFNEDSNIKVFLISLKAGGVGLNLT- 983 Query: 128 GGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTK 187 ++++ F WW+ Q +R + G + V V L+A++TI+E ++ K Sbjct: 984 SASVVIHFDPWWNPAVEDQATDR-----AHRFGQENKVEVIKLVAKDTIEEKIVLMQEDK 1038 Query: 188 STIQDLLLNA 197 + L++ Sbjct: 1039 RELIQSLMDG 1048 >gi|308178567|ref|YP_003917973.1| putative ATP-dependent helicase [Arthrobacter arilaitensis Re117] gi|307746030|emb|CBT77002.1| putative ATP-dependent helicase [Arthrobacter arilaitensis Re117] Length = 1071 Score = 124 bits (311), Expect = 8e-27, Method: Composition-based stats. Identities = 42/206 (20%), Positives = 79/206 (38%), Gaps = 22/206 (10%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEV 61 +++ + ++E+ + + F QLA E K++ L Sbjct: 854 RRFQRVRQEVLGLVDDVDSNRFKILQSLTLLRQLALDPSLVGEGD----APSAKLEMLRE 909 Query: 62 IIEKA--NAAPIIVAYHFNSDLAR---------LQKAFPQGRTLD-KDPCTIQEWNEGKI 109 ++ A I+V F L + + + G T K I ++ + Sbjct: 910 LMADAVSEGHKILVFSQFTGFLQKARQVAEELGIDHGYLDGATSGVKRKELIDGFSAEQF 969 Query: 110 PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYY 169 P+ F S G G+NL + + WW+ + Q I+R + G R V+VY Sbjct: 970 PVFFISLKSGGFGINLT-SADYCILLDPWWNPQAEAQAIDR-----AHRIGQTRPVYVYR 1023 Query: 170 LIAQNTIDELVLQRLRTKSTIQDLLL 195 L+A++TI+ VL K+ + + +L Sbjct: 1024 LVAKDTIESKVLALQAKKTQLFNDVL 1049 >gi|168212253|ref|ZP_02637878.1| putative helicase [Clostridium perfringens CPE str. F4969] gi|170716039|gb|EDT28221.1| putative helicase [Clostridium perfringens CPE str. F4969] Length = 1067 Score = 124 bits (311), Expect = 8e-27, Method: Composition-based stats. Identities = 32/190 (16%), Positives = 72/190 (37%), Gaps = 22/190 (11%) Query: 21 EAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKAN--AAPIIVAYHFN 78 + N + K ++ + K+ ++ I++ A+ I++ F Sbjct: 866 DKINLFAYLTKLREICLDPSLVVPDYT---GGSSKLTVVKEIVKDASESGKKILLFSQFT 922 Query: 79 SDLARLQKAFPQ-----------GRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQY 127 S L ++++ F + D+ + + I + + G GLNL Sbjct: 923 SVLQKIEEDFKKEDISYLYLDGGTSAKDRVERVKKFNEDSNIKVFLISLKAGGVGLNLT- 981 Query: 128 GGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTK 187 ++++ F WW+ Q +R + G + V V L+A++TI+E ++ K Sbjct: 982 SASVVIHFDPWWNPAVEDQATDR-----AHRFGQENKVEVIKLVAKDTIEEKIVLMQEDK 1036 Query: 188 STIQDLLLNA 197 + L++ Sbjct: 1037 RELIQSLMDG 1046 >gi|257896952|ref|ZP_05676605.1| Snf2 family protein [Enterococcus faecium Com12] gi|257833517|gb|EEV59938.1| Snf2 family protein [Enterococcus faecium Com12] Length = 1067 Score = 124 bits (311), Expect = 8e-27, Method: Composition-based stats. Identities = 39/212 (18%), Positives = 85/212 (40%), Gaps = 26/212 (12%) Query: 3 QYHKFQRELYCDLQGENIEAF-----NSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIK 57 Y + R++ ++ + EAF + + Q+ + E+ + K++ Sbjct: 841 VYLAYLRQMREEISSMDSEAFKKNRIGILAGLTRLRQICCDPRLFIED---YQGGSGKLE 897 Query: 58 ALEVIIEKA--NAAPIIVAYHFNSDLARLQKAFPQ---------GRTLDKDP-CTIQEWN 105 ++ ++ A N +++ F L LQ+ + G T +D + +N Sbjct: 898 QVKDLLVAAKENKRRVLLFSQFTGMLTILQEELAELGISTFYLRGSTKPQDRLSMVDAFN 957 Query: 106 EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 G+ + + G GLNL G + ++ + LWW+ +Q R + G K V Sbjct: 958 AGEKDVFLISLKAGGTGLNLT-GADTVILYDLWWNPAIEEQAAGR-----AHRIGQKNVV 1011 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 V+ +I++ TI+E + + K + ++ Sbjct: 1012 EVWRMISEGTIEERMDSLQQEKRELFQKVIQG 1043 >gi|297625268|ref|YP_003687031.1| Helicase (SNF2-related protein) [Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1] gi|296921033|emb|CBL55571.1| Helicase (SNF2-related protein) [Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1] Length = 1132 Score = 124 bits (311), Expect = 8e-27, Method: Composition-based stats. Identities = 38/181 (20%), Positives = 66/181 (36%), Gaps = 20/181 (11%) Query: 26 ASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANA--APIIVAYHFNSDLAR 83 + + QL+ DE + KI L + +V F S L Sbjct: 941 LAALTRLRQLSLAPGLVDE--KMLNIGSAKIDTLVEHLRALAGENHRALVFSQFTSFLHL 998 Query: 84 LQKA---------FPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVF 134 ++ + GRT +D +Q + +G + G GL L + V Sbjct: 999 VRDRLTTEGIEWEYLDGRTRHRDER-VQRFKDGNATAFLISLKAGGFGLTLTEADYVYVL 1057 Query: 135 FSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 WW+ Q I+R + G + V VY +++ NTI+E V+ + K + D + Sbjct: 1058 -DPWWNPAAENQAIDR-----THRIGQDKQVMVYRMVSTNTIEEKVVALQQRKRDLFDQV 1111 Query: 195 L 195 + Sbjct: 1112 V 1112 >gi|227552615|ref|ZP_03982664.1| Snf2 family helicase [Enterococcus faecium TX1330] gi|227178241|gb|EEI59213.1| Snf2 family helicase [Enterococcus faecium TX1330] Length = 1064 Score = 124 bits (311), Expect = 8e-27, Method: Composition-based stats. Identities = 39/212 (18%), Positives = 85/212 (40%), Gaps = 26/212 (12%) Query: 3 QYHKFQRELYCDLQGENIEAF-----NSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIK 57 Y + R++ ++ + EAF + + Q+ + E+ + K++ Sbjct: 838 VYLAYLRQMREEISSMDSEAFKKNRIGILAGLTRLRQICCDPRLFIED---YQGGSGKLE 894 Query: 58 ALEVIIEKA--NAAPIIVAYHFNSDLARLQKAFPQ---------GRTLDKDP-CTIQEWN 105 ++ ++ A N +++ F L LQ+ + G T +D + +N Sbjct: 895 QVKDLLVAAKENKRRVLLFSQFTGMLTILQEELAELGISTFYLRGSTKPQDRLSMVDAFN 954 Query: 106 EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 G+ + + G GLNL G + ++ + LWW+ +Q R + G K V Sbjct: 955 AGEKDVFLISLKAGGTGLNLT-GADTVILYDLWWNPAIEEQAAGR-----AHRIGQKNVV 1008 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 V+ +I++ TI+E + + K + ++ Sbjct: 1009 EVWRMISEGTIEERMDSLQQEKRELFQKVIQG 1040 >gi|125625080|ref|YP_001033563.1| SWI/SNF family helicase [Lactococcus lactis subsp. cremoris MG1363] gi|124493888|emb|CAL98882.1| SWI/SNF family helicase [Lactococcus lactis subsp. cremoris MG1363] Length = 1034 Score = 124 bits (311), Expect = 9e-27, Method: Composition-based stats. Identities = 35/207 (16%), Positives = 75/207 (36%), Gaps = 25/207 (12%) Query: 6 KFQRELYCDLQGENIEAF--NSASKTVKCLQLANG-AVYYDEEKHWKEVHDEKIKALEVI 62 + ++ ++ + + + Q+ N A++ D+ K K++ L + Sbjct: 820 ELMQKQVLEMDNAALSRSRIEILAGITRLRQICNTPALFMDDYK----GSSGKLERLREL 875 Query: 63 IEK--ANAAPIIVAYHFNSDLARLQKAFPQGR----------TLDKDPCTIQEWNEGKIP 110 + + + ++ F ++K + + +Q +N G Sbjct: 876 LAQIKDSGHRPLIFSQFTKVFPHIEKLMEEQEMTAYKLTGSTPIKDRLSMVQAFNAGSRD 935 Query: 111 LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYL 170 + G GLNL ++++ LWW+ +Q I R + G K V V L Sbjct: 936 AFLVSLKAGGVGLNLT-SADVVILVDLWWNPAVEEQAIAR-----AHRMGQKNTVEVIRL 989 Query: 171 IAQNTIDELVLQRLRTKSTIQDLLLNA 197 I Q TI+E +++ K + +L Sbjct: 990 ITQGTIEEKIMEIQERKKDLIANVLEG 1016 >gi|300071885|gb|ADJ61285.1| SWI/SNF family helicase [Lactococcus lactis subsp. cremoris NZ9000] Length = 1031 Score = 124 bits (311), Expect = 9e-27, Method: Composition-based stats. Identities = 35/207 (16%), Positives = 75/207 (36%), Gaps = 25/207 (12%) Query: 6 KFQRELYCDLQGENIEAF--NSASKTVKCLQLANG-AVYYDEEKHWKEVHDEKIKALEVI 62 + ++ ++ + + + Q+ N A++ D+ K K++ L + Sbjct: 817 ELMQKQVLEMDNAALSRSRIEILAGITRLRQICNTPALFMDDYK----GSSGKLERLREL 872 Query: 63 IEK--ANAAPIIVAYHFNSDLARLQKAFPQGR----------TLDKDPCTIQEWNEGKIP 110 + + + ++ F ++K + + +Q +N G Sbjct: 873 LAQIKDSGHRPLIFSQFTKVFPHIEKLMEEQEMTAYKLTGSTPIKDRLSMVQAFNAGSRD 932 Query: 111 LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYL 170 + G GLNL ++++ LWW+ +Q I R + G K V V L Sbjct: 933 AFLVSLKAGGVGLNLT-SADVVILVDLWWNPAVEEQAIAR-----AHRMGQKNTVEVIRL 986 Query: 171 IAQNTIDELVLQRLRTKSTIQDLLLNA 197 I Q TI+E +++ K + +L Sbjct: 987 ITQGTIEEKIMEIQERKKDLIANVLEG 1013 >gi|158292419|ref|XP_313902.4| AGAP005035-PA [Anopheles gambiae str. PEST] gi|157016983|gb|EAA09385.4| AGAP005035-PA [Anopheles gambiae str. PEST] Length = 1608 Score = 124 bits (311), Expect = 9e-27, Method: Composition-based stats. Identities = 35/176 (19%), Positives = 72/176 (40%), Gaps = 21/176 (11%) Query: 44 EEKHWKEVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQKAF----------PQG 91 +K K+ L+ ++ + +++ + L++ Sbjct: 1116 PDKQTLVSDAGKLAVLDSLLARLKEQGHRVLIYSQMTKMIDLLEEYMWHRKHRYMRLDGS 1175 Query: 92 RTLDKDPCTIQEW-NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 + + + ++ N I + + G G+NL + ++F+ W+ QQ ++R Sbjct: 1176 SKISERRDMVADFQNRADIFVFLLSTRAGGLGINLT-AADTVIFYDSDWNPTVDQQAMDR 1234 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA--LKKETIH 204 + G + V VY LI + TI+E +LQR R KS IQ +++N K +T+ Sbjct: 1235 -----AHRLGQTKQVTVYRLICKGTIEERILQRAREKSEIQRMVINGDNFKPDTLK 1285 >gi|326407578|gb|ADZ64649.1| DNA/RNA helicase, SWF/SNF family [Lactococcus lactis subsp. lactis CV56] Length = 1034 Score = 124 bits (311), Expect = 9e-27, Method: Composition-based stats. Identities = 34/207 (16%), Positives = 75/207 (36%), Gaps = 25/207 (12%) Query: 6 KFQRELYCDLQGENIEAF--NSASKTVKCLQLANG-AVYYDEEKHWKEVHDEKIKALEVI 62 + ++ ++ + + + Q+ N A++ D+ K K++ L + Sbjct: 820 ELMQKQVLEMDSAALSRSRIEILAGITRLRQICNTPALFMDDYK----GSSGKLERLREL 875 Query: 63 IEK--ANAAPIIVAYHFNSDLARLQKAFPQGR----------TLDKDPCTIQEWNEGKIP 110 + + + ++ F ++K + + +Q +N G Sbjct: 876 LAQIKDSGHRPLIFSQFTKVFPHIEKLMEEQEMTAYKLTGSTPIKDRLSMVQAFNAGSRD 935 Query: 111 LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYL 170 + G GLNL ++++ LWW+ +Q I R + G K V V L Sbjct: 936 AFLVSLKAGGVGLNLT-SADVVILVDLWWNPAVEEQAIAR-----AHRMGQKNTVEVIRL 989 Query: 171 IAQNTIDELVLQRLRTKSTIQDLLLNA 197 I + TI+E +++ K + +L Sbjct: 990 ITKGTIEEKIMEIQERKKDLIANVLEG 1016 >gi|281492645|ref|YP_003354625.1| SWF/SNF family DNA/RNA helicase [Lactococcus lactis subsp. lactis KF147] gi|281376309|gb|ADA65800.1| DNA/RNA helicase, SWF/SNF family [Lactococcus lactis subsp. lactis KF147] Length = 1034 Score = 124 bits (311), Expect = 9e-27, Method: Composition-based stats. Identities = 34/207 (16%), Positives = 75/207 (36%), Gaps = 25/207 (12%) Query: 6 KFQRELYCDLQGENIEAF--NSASKTVKCLQLANG-AVYYDEEKHWKEVHDEKIKALEVI 62 + ++ ++ + + + Q+ N A++ D+ K K++ L + Sbjct: 820 ELMQKQVLEMDSAALSRSRIEILAGITRLRQICNTPALFMDDYK----GSSGKLERLREL 875 Query: 63 IEK--ANAAPIIVAYHFNSDLARLQKAFPQGR----------TLDKDPCTIQEWNEGKIP 110 + + + ++ F ++K + + +Q +N G Sbjct: 876 LAQIKDSGHRPLIFSQFTKVFPHIEKLMEEQEMTAYKLTGSTPIKDRLSMVQAFNAGSRD 935 Query: 111 LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYL 170 + G GLNL ++++ LWW+ +Q I R + G K V V L Sbjct: 936 AFLVSLKAGGVGLNLT-SADVVILVDLWWNPAVEEQAIAR-----AHRMGQKNTVEVIRL 989 Query: 171 IAQNTIDELVLQRLRTKSTIQDLLLNA 197 I + TI+E +++ K + +L Sbjct: 990 ITKGTIEEKIMEIQERKKDLIANVLEG 1016 >gi|290956330|ref|YP_003487512.1| helicase [Streptomyces scabiei 87.22] gi|260645856|emb|CBG68947.1| putative helicase [Streptomyces scabiei 87.22] Length = 968 Score = 124 bits (311), Expect = 9e-27, Method: Composition-based stats. Identities = 34/219 (15%), Positives = 73/219 (33%), Gaps = 26/219 (11%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASK--TVKCLQLANGAVYYDEEKHWKEVHDEKI--- 56 Y RE ++ + A Q+ + Y +E+ + + Sbjct: 736 ALYEAVVRESLLAIETADGMARRGLVLKLLGALKQICDHPALYLKEEPATATGERFVGRS 795 Query: 57 -----KALEVIIEKANAAPIIVAYHFNSDLARLQKAFP----------QGRTLDKDPCTI 101 + + +V + + G + + + Sbjct: 796 GKLALLDELLDTLLSEDGSALVFTQYVGMARLITAHLAARAVPVELLHGGTPVTEREHMV 855 Query: 102 QEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGF 161 + G P+L + G GLNL G+ +V F WW+ +Q +R + G Sbjct: 856 DRFQSGATPVLVLSLKAAGTGLNLTRAGH-VVHFDRWWNPAVEEQATDR-----AYRIGQ 909 Query: 162 KRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKK 200 + V V+ LI + T+++ + + L +K + D +L + + Sbjct: 910 TQPVQVHRLITEGTVEDRIAEMLESKRALSDAVLGSGEA 948 >gi|52082146|ref|YP_080937.1| putative helicase YwqA [Bacillus licheniformis ATCC 14580] gi|52787537|ref|YP_093366.1| YwqA [Bacillus licheniformis ATCC 14580] gi|319648023|ref|ZP_08002240.1| YwqA protein [Bacillus sp. BT1B_CT2] gi|52005357|gb|AAU25299.1| putative helicase YwqA [Bacillus licheniformis ATCC 14580] gi|52350039|gb|AAU42673.1| YwqA [Bacillus licheniformis ATCC 14580] gi|317389658|gb|EFV70468.1| YwqA protein [Bacillus sp. BT1B_CT2] Length = 921 Score = 124 bits (311), Expect = 9e-27, Method: Composition-based stats. Identities = 38/213 (17%), Positives = 84/213 (39%), Gaps = 25/213 (11%) Query: 3 QYHKFQRELY---CDLQGENIEAFNSASKTVKCLQLANG-AVY-YDEEKHWKEVHDEKIK 57 Y + ++ + L G +A S K Q+ A+Y + K++ Sbjct: 691 LYEQLVKDTFEHMSSLAGMQRKAL-ILSMLGKLKQICGHPALYLKETGSELLNGRSVKLE 749 Query: 58 ALEVIIE--KANAAPIIVAYHFNSDLARLQKAFPQ-----GRTLD------KDPCTIQEW 104 L + + + + ++ + +++ + + L+ + ++++ Sbjct: 750 KLLELTKTIRESDESCLIFTQYLGMGDMMKRLLEKSFGEPVKFLNGSLSKLERDKMVEQF 809 Query: 105 NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA 164 + P+L + G GLNL N ++ + WW+ Q +R + G KR Sbjct: 810 QNKEFPILILSLKAGGTGLNLT-AANHVIHYDRWWNPAVENQATDR-----AYRIGQKRF 863 Query: 165 VFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 V V+ LI TI+E + Q L +K ++ D ++ + Sbjct: 864 VHVHKLITTGTIEEKIDQMLESKQSLNDQIIQS 896 >gi|15674024|ref|NP_268199.1| SWI/SNF family helicase [Lactococcus lactis subsp. lactis Il1403] gi|12725092|gb|AAK06140.1|AE006434_2 SWI/SNF family helicase [Lactococcus lactis subsp. lactis Il1403] Length = 1034 Score = 124 bits (311), Expect = 1e-26, Method: Composition-based stats. Identities = 34/207 (16%), Positives = 75/207 (36%), Gaps = 25/207 (12%) Query: 6 KFQRELYCDLQGENIEAF--NSASKTVKCLQLANG-AVYYDEEKHWKEVHDEKIKALEVI 62 + ++ ++ + + + Q+ N A++ D+ K K++ L + Sbjct: 820 ELMQKQVLEMDSAALSRSRIEILAGITRLRQICNTPALFMDDYK----GSSGKLERLREL 875 Query: 63 IEK--ANAAPIIVAYHFNSDLARLQKAFPQGR----------TLDKDPCTIQEWNEGKIP 110 + + + ++ F ++K + + +Q +N G Sbjct: 876 LAQIKDSGHRPLIFSQFTKVFPHIEKLMEEQEMTAYKLTGSTPIKDRLSMVQAFNAGSRD 935 Query: 111 LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYL 170 + G GLNL ++++ LWW+ +Q I R + G K V V L Sbjct: 936 AFLVSLKAGGVGLNLT-SADVVILVDLWWNPAVEEQAIAR-----AHRMGQKNTVEVIRL 989 Query: 171 IAQNTIDELVLQRLRTKSTIQDLLLNA 197 I + TI+E +++ K + +L Sbjct: 990 ITKGTIEEKIMEIQERKKDLIANVLEG 1016 >gi|293571575|ref|ZP_06682597.1| Snf2 family protein [Enterococcus faecium E980] gi|291608381|gb|EFF37681.1| Snf2 family protein [Enterococcus faecium E980] Length = 1064 Score = 123 bits (310), Expect = 1e-26, Method: Composition-based stats. Identities = 39/212 (18%), Positives = 85/212 (40%), Gaps = 26/212 (12%) Query: 3 QYHKFQRELYCDLQGENIEAF-----NSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIK 57 Y + R++ ++ + EAF + + Q+ + E+ + K++ Sbjct: 838 VYLAYLRQMREEISSMDSEAFKKNRIGILAGLTRLRQICCDPRLFIED---YQGGSGKLE 894 Query: 58 ALEVIIEKA--NAAPIIVAYHFNSDLARLQKAFPQ---------GRTLDKDP-CTIQEWN 105 ++ ++ A N +++ F L LQ+ + G T +D + +N Sbjct: 895 QVKDLLVAAKENKRRVLLFSQFTGMLTILQEELAELGISTFYLRGSTKPQDRLSMVDAFN 954 Query: 106 EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 G+ + + G GLNL G + ++ + LWW+ +Q R + G K V Sbjct: 955 AGEKDVFLISLKAGGTGLNLT-GADTVILYDLWWNPAIEEQAAGR-----AHRIGQKNVV 1008 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 V+ +I++ TI+E + + K + ++ Sbjct: 1009 EVWRMISEGTIEERMDSLQQEKRELFQKVIQG 1040 >gi|300313869|ref|YP_003777961.1| superfamily II helicase [Herbaspirillum seropedicae SmR1] gi|300076654|gb|ADJ66053.1| superfamily II helicase protein [Herbaspirillum seropedicae SmR1] Length = 829 Score = 123 bits (310), Expect = 1e-26, Method: Composition-based stats. Identities = 42/193 (21%), Positives = 73/193 (37%), Gaps = 21/193 (10%) Query: 15 LQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEK--ANAAPII 72 L G + ++ +K Q+ + + K + KI L + A I+ Sbjct: 614 LGGSQVTVMDA---LLKLRQVCCDPYLLKQGRMPKGLERAKIDWLCDTLPALVAEGRRIL 670 Query: 73 VAYHFNSDLARLQ---------KAFPQGRTLDKDPCT-IQEWNEGKIPLLFAHPASCGHG 122 V F L + G T I + + + PL+ + G G Sbjct: 671 VFSQFTGMLKLIAAQLEPLQLPYLMLTGETEPAARADVIAGFQQEQTPLMLVSLKAGGVG 730 Query: 123 LNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQ 182 LNL + +V WW+ +Q I R + G +R VFVY L+ + +I+E +L+ Sbjct: 731 LNLT-AADTVVLVDPWWNPAVEEQAIAR-----AHRLGQQRQVFVYKLVIEGSIEERLLE 784 Query: 183 RLRTKSTIQDLLL 195 KS + + +L Sbjct: 785 LQARKSALAEGML 797 >gi|257899587|ref|ZP_05679240.1| Snf2 family protein [Enterococcus faecium Com15] gi|257837499|gb|EEV62573.1| Snf2 family protein [Enterococcus faecium Com15] Length = 1067 Score = 123 bits (310), Expect = 1e-26, Method: Composition-based stats. Identities = 39/212 (18%), Positives = 85/212 (40%), Gaps = 26/212 (12%) Query: 3 QYHKFQRELYCDLQGENIEAF-----NSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIK 57 Y + R++ ++ + EAF + + Q+ + E+ + K++ Sbjct: 841 VYLAYLRQMREEISSMDSEAFKKNRIGILAGLTRLRQICCDPRLFIED---YQGGSGKLE 897 Query: 58 ALEVIIEKA--NAAPIIVAYHFNSDLARLQKAFPQ---------GRTLDKDP-CTIQEWN 105 ++ ++ A N +++ F L LQ+ + G T +D + +N Sbjct: 898 QVKDLLVAAKENKRRVLLFSQFTGMLTILQEELAELGISTFYLRGSTKPQDRLSMVDAFN 957 Query: 106 EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 G+ + + G GLNL G + ++ + LWW+ +Q R + G K V Sbjct: 958 AGEKDVFLISLKAGGTGLNLT-GADTVILYDLWWNPAIEEQAAGR-----AHRIGQKNVV 1011 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 V+ +I++ TI+E + + K + ++ Sbjct: 1012 EVWRMISEGTIEERMDSLQQEKRELFQKVIQG 1043 >gi|116627171|ref|YP_819790.1| SNF2 family DNA/RNA helicase [Streptococcus thermophilus LMD-9] gi|116100448|gb|ABJ65594.1| Superfamily II DNA/RNA helicase, SNF2 family [Streptococcus thermophilus LMD-9] Length = 1031 Score = 123 bits (310), Expect = 1e-26, Method: Composition-based stats. Identities = 37/211 (17%), Positives = 76/211 (36%), Gaps = 25/211 (11%) Query: 1 MKQYHKFQRELYCDLQGENIE--AFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKA 58 + Q + Q+ L + I S + Q+ + + + K+ + Sbjct: 811 LAQLQQMQQGLI-SASDQEINRRKVEILSGITRLRQICDTPALFMD----YAGDSGKLDS 865 Query: 59 LEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTL----------DKDPCTIQEWNE 106 L ++ + + +++ F L ++ + D + +N+ Sbjct: 866 LRDLLSQIKESDHRVLIFSQFRGMLDITEELLQELGISSYKLTGSTPSDSRHEMTRAFNQ 925 Query: 107 GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVF 166 G + G GLNL G + ++ LWW+ Q I R + G K+ V Sbjct: 926 GSRDAFLISLKAGGVGLNLT-GADTVILIDLWWNPAVEMQAISR-----AHRIGQKQNVE 979 Query: 167 VYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 V+ LI + TI+E +L+ K + +L+ Sbjct: 980 VFRLITRGTIEEKILELQEGKKNLVTTVLDG 1010 >gi|116512988|ref|YP_811895.1| SNF2 family DNA/RNA helicase [Lactococcus lactis subsp. cremoris SK11] gi|116108642|gb|ABJ73782.1| Superfamily II DNA/RNA helicase, SNF2 family [Lactococcus lactis subsp. cremoris SK11] Length = 1034 Score = 123 bits (310), Expect = 1e-26, Method: Composition-based stats. Identities = 35/207 (16%), Positives = 75/207 (36%), Gaps = 25/207 (12%) Query: 6 KFQRELYCDLQGENIEAF--NSASKTVKCLQLANG-AVYYDEEKHWKEVHDEKIKALEVI 62 + ++ ++ + + + Q+ N A++ D+ K K++ L + Sbjct: 820 ELMQKQVLEMDNAALSRSRIEILAGITRLRQICNTPALFMDDYK----GSSGKLERLREL 875 Query: 63 IEK--ANAAPIIVAYHFNSDLARLQKAFPQGR----------TLDKDPCTIQEWNEGKIP 110 + + + ++ F ++K + + +Q +N G Sbjct: 876 LAQIKDSGHRPLIFSQFTKVFPHIEKLMEEQEMTAYKLTGSTPIKDRLSMVQAFNAGSRD 935 Query: 111 LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYL 170 + G GLNL ++++ LWW+ +Q I R + G K V V L Sbjct: 936 AFLVSLKAGGVGLNLT-SADVVILVDLWWNPAVEEQAIAR-----AHRMGQKNTVEVIRL 989 Query: 171 IAQNTIDELVLQRLRTKSTIQDLLLNA 197 I Q TI+E +++ K + +L Sbjct: 990 ITQGTIEEKIMEIQERKKDLIANVLEG 1016 >gi|223985797|ref|ZP_03635840.1| hypothetical protein HOLDEFILI_03146 [Holdemania filiformis DSM 12042] gi|223962245|gb|EEF66714.1| hypothetical protein HOLDEFILI_03146 [Holdemania filiformis DSM 12042] Length = 1073 Score = 123 bits (310), Expect = 1e-26, Method: Composition-based stats. Identities = 37/186 (19%), Positives = 70/186 (37%), Gaps = 25/186 (13%) Query: 26 ASKTVKCLQLAN--GAVYYDEEKHWKEVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDL 81 + + Q+ G V+ K+ A +IE A + I+V F + L Sbjct: 878 LAMLTRLRQICCDPGLVFDGYGGE-----RSKLTACMELIENAVESGKKILVFSQFTTIL 932 Query: 82 ARLQKAFPQ----------GRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNI 131 +L+ + + ++ +N K P+ + G GLNL G I Sbjct: 933 DKLRGECEKRGIGTYLLTGATPKQQRFDLMESFNRDKTPVFLISLKAGGTGLNLT-GAEI 991 Query: 132 LVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQ 191 ++ + WW+L Q +R + G R V V LI + T++E + + + K + Sbjct: 992 VIHYDPWWNLSAENQATDR-----AYRIGQTRNVQVVKLIVEGTVEEKISKLQQQKQQLS 1046 Query: 192 DLLLNA 197 ++ Sbjct: 1047 QSVIEG 1052 >gi|46447008|ref|YP_008373.1| hypothetical protein pc1374 [Candidatus Protochlamydia amoebophila UWE25] gi|46400649|emb|CAF24098.1| conserved hypothetical protein [Candidatus Protochlamydia amoebophila UWE25] Length = 1161 Score = 123 bits (310), Expect = 1e-26, Method: Composition-based stats. Identities = 34/209 (16%), Positives = 79/209 (37%), Gaps = 21/209 (10%) Query: 2 KQYHKFQRELYCDL---QGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKA 58 + Y RE L +G + + + Q+ + + + K + Sbjct: 940 RSYAASAREELSQLVKKEGFERVQIHVLATLTRLKQICCHPAIF-AKDRPENGDSSKYEM 998 Query: 59 LEVIIEKA--NAAPIIVAYHFNSDLARLQKAFPQ---------GRTLDKDPCTIQEWNEG 107 L +++ + ++ + L +++ + G + ++ + + Sbjct: 999 LLELLQTLMESKHKTVIFSQYTRMLNIMREDLEKQGIRFEYLDGSSKNRLSIVKKFNEDP 1058 Query: 108 KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFV 167 IP+ + G GLNL G + ++ + +WW+ Q +R+ + G K +V Sbjct: 1059 NIPIFLVSLKAGGSGLNL-VGADTVIHYDMWWNPAVENQATDRV-----HRLGQKNSVSS 1112 Query: 168 YYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 Y LI NTI+E +L+ K + +++ Sbjct: 1113 YKLITLNTIEEKILELHNRKKGLVKEVVS 1141 >gi|326444829|ref|ZP_08219563.1| SNF2/RAD54 family helicase [Streptomyces clavuligerus ATCC 27064] Length = 980 Score = 123 bits (310), Expect = 1e-26, Method: Composition-based stats. Identities = 42/209 (20%), Positives = 77/209 (36%), Gaps = 23/209 (11%) Query: 3 QYHKFQRELYCDLQGENIEAFNSAS--KTVKCLQLANG-AVYYDEEKHWKEVHDEKIKAL 59 Y RE + Q+ N A Y EE+ K++ L Sbjct: 751 LYEAVVRETLDAVAAAQGMERRGLVVRLLTSLKQICNHPAQYLKEEEPVLGGRSGKLELL 810 Query: 60 EVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTLDK-----------DPCTIQEWNE 106 + +++ A A ++V + ARL ++ R + + + Sbjct: 811 DELLDTIVAEGAGVLVFTQYVRM-ARLLESHLAARGIAAQLLHGGTPVPVRDEMVTRFQN 869 Query: 107 GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVF 166 G++P+ + G GLNL + +V WW+ Q +R + G R V Sbjct: 870 GEVPVFLLSLKAAGTGLNLTRAEH-VVHLDRWWNPAVEAQATDR-----AYRIGQTRPVQ 923 Query: 167 VYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 V+ LIA+ T+++ + + L K + D +L Sbjct: 924 VHRLIAEGTVEDRIAELLARKRELADAVL 952 >gi|294816509|ref|ZP_06775152.1| Putative SNF2/RAD54 family helicase [Streptomyces clavuligerus ATCC 27064] gi|294329108|gb|EFG10751.1| Putative SNF2/RAD54 family helicase [Streptomyces clavuligerus ATCC 27064] Length = 1040 Score = 123 bits (310), Expect = 1e-26, Method: Composition-based stats. Identities = 42/209 (20%), Positives = 77/209 (36%), Gaps = 23/209 (11%) Query: 3 QYHKFQRELYCDLQGENIEAFNSAS--KTVKCLQLANG-AVYYDEEKHWKEVHDEKIKAL 59 Y RE + Q+ N A Y EE+ K++ L Sbjct: 811 LYEAVVRETLDAVAAAQGMERRGLVVRLLTSLKQICNHPAQYLKEEEPVLGGRSGKLELL 870 Query: 60 EVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTLDK-----------DPCTIQEWNE 106 + +++ A A ++V + ARL ++ R + + + Sbjct: 871 DELLDTIVAEGAGVLVFTQYVRM-ARLLESHLAARGIAAQLLHGGTPVPVRDEMVTRFQN 929 Query: 107 GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVF 166 G++P+ + G GLNL + +V WW+ Q +R + G R V Sbjct: 930 GEVPVFLLSLKAAGTGLNLTRAEH-VVHLDRWWNPAVEAQATDR-----AYRIGQTRPVQ 983 Query: 167 VYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 V+ LIA+ T+++ + + L K + D +L Sbjct: 984 VHRLIAEGTVEDRIAELLARKRELADAVL 1012 >gi|319938677|ref|ZP_08013041.1| Snf2 family protein [Streptococcus anginosus 1_2_62CV] gi|319811727|gb|EFW07993.1| Snf2 family protein [Streptococcus anginosus 1_2_62CV] Length = 1036 Score = 123 bits (310), Expect = 1e-26, Method: Composition-based stats. Identities = 40/212 (18%), Positives = 80/212 (37%), Gaps = 18/212 (8%) Query: 1 MKQYHKFQRELYCDLQGE-NIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKAL 59 + Q + Q + + E N S ++ Q+ + + E+ H + E + L Sbjct: 811 LAQLKQMQERVLASTEEELNRSKMEILSGLMRLRQICDTPALFMEDYHGESGKLESLLEL 870 Query: 60 EVIIEKANAAPIIVAYHFNSDLARLQKAFPQGR----------TLDKDPCTIQEWNEGKI 109 I + + +++ F L ++K + + + +N G+ Sbjct: 871 LEQI-QTGSHRVLIFSQFRGMLDIIEKELKKMKMEAFKITGSTPAKERQEMTNAFNNGEG 929 Query: 110 PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYY 169 + G GLNL G + ++ LWW+ Q I R + G +R V VY Sbjct: 930 DAFLISLKAGGVGLNLT-GADTVILVDLWWNPAVESQAIGR-----AHRMGQERNVEVYR 983 Query: 170 LIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 LI + TI+E + + +K + +L+ + Sbjct: 984 LITRGTIEEKIQELQESKRHLVSTILDGTESR 1015 >gi|308275178|emb|CBX31775.1| hypothetical protein N47_N26000 [uncultured Desulfobacterium sp.] Length = 889 Score = 123 bits (310), Expect = 1e-26, Method: Composition-based stats. Identities = 44/223 (19%), Positives = 77/223 (34%), Gaps = 33/223 (14%) Query: 1 MKQYHKFQRELYC-------DLQGENIEAFN------SASKTVKCLQLANGAVYYDEEKH 47 MK Y R+ +L+ +E S +K QL N Y+ Sbjct: 650 MKTYSDLSRKQVLLYNKVVEELKRAIVETEGIQRKGLVLSSIIKFKQLCNHPDQYNGTTE 709 Query: 48 WKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFP-----------QGRTL 94 ++E K L I E ++V F L G + Sbjct: 710 YEEKDSGKFARLREICETIYEKREKVLVFTQFKEMTEPLSVFLESIFFRKGLILHGGVPV 769 Query: 95 DKDPCTIQEWNEGK-IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGV 153 + ++E+ IP + + G GLNL N ++ F WW+ Q +R Sbjct: 770 SRRKKIVEEFQSQSYIPFMVLSLKAGGVGLNLTE-ANHVIHFDRWWNPAVEDQATDR--- 825 Query: 154 TRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + G K+ V V+ I + T++E + L K + + +++ Sbjct: 826 --AFRIGQKKNVIVHKFITKGTVEEKIDNMLEEKKKLSNDVIS 866 >gi|262195025|ref|YP_003266234.1| SNF2-related protein [Haliangium ochraceum DSM 14365] gi|262078372|gb|ACY14341.1| SNF2-related protein [Haliangium ochraceum DSM 14365] Length = 985 Score = 123 bits (310), Expect = 1e-26, Method: Composition-based stats. Identities = 30/183 (16%), Positives = 62/183 (33%), Gaps = 20/183 (10%) Query: 24 NSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIE--KANAAPIIVAYHFNSDL 81 + ++ Q A + K++ L + A +V + L Sbjct: 791 EALEALLRLRQAACHPALL-PGREA--DTSAKMEMLVDALSVVAAEGGKALVFSQWTGLL 847 Query: 82 ARLQKAF---------PQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNIL 132 ++ G T D+ +E ++ + G GLNL + + Sbjct: 848 DLIEPHLRAAEISFNRLDGSTRDRGGVVAAFQDESGPTVMLISLKAGGTGLNLT-AADHV 906 Query: 133 VFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQD 192 WW+ +Q +R + G R V VY L++++T++E +L K + + Sbjct: 907 FLCDPWWNPAVEEQAADR-----AHRIGQDRPVMVYRLVSKDTVEERILALQEQKRALAE 961 Query: 193 LLL 195 + Sbjct: 962 AAI 964 >gi|322411161|gb|EFY02069.1| SWF/SNF family helicase [Streptococcus dysgalactiae subsp. dysgalactiae ATCC 27957] Length = 1030 Score = 123 bits (310), Expect = 1e-26, Method: Composition-based stats. Identities = 36/208 (17%), Positives = 76/208 (36%), Gaps = 25/208 (12%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEV 61 + + + + D+ IE + + Q+ + + + K+++L Sbjct: 816 QMHDQIRTASDADINRRKIEILSG---ITRLRQICDTPSLFMDYD----GESGKLESLRT 868 Query: 62 IIEK--ANAAPIIVAYHFNSDLARLQKAFP----------QGRTLDKDPCTIQEWNEGKI 109 ++ + N ++ F L ++ ++ + +N G Sbjct: 869 LLLQIKENGHRALIFSQFRGMLDLAKQEMDALGLTAYQMTGSTPANERQEMTRAFNNGSK 928 Query: 110 PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYY 169 + + G GLNL G + +V LWW+ Q I R + G + V VY Sbjct: 929 DVFLISLKAGGVGLNLT-GADTVVLIDLWWNPAVEMQAISR-----AHRIGQEDNVEVYR 982 Query: 170 LIAQNTIDELVLQRLRTKSTIQDLLLNA 197 LI + TI+E +L+ +K + +L+ Sbjct: 983 LITRGTIEEKILELQESKRNLVTTVLDG 1010 >gi|226313275|ref|YP_002773169.1| hypothetical protein BBR47_36880 [Brevibacillus brevis NBRC 100599] gi|226096223|dbj|BAH44665.1| conserved hypothetical protein [Brevibacillus brevis NBRC 100599] Length = 1090 Score = 123 bits (310), Expect = 1e-26, Method: Composition-based stats. Identities = 35/182 (19%), Positives = 75/182 (41%), Gaps = 21/182 (11%) Query: 26 ASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVII-EKAN-AAPIIVAYHFNSDLAR 83 + + Q+ + +E + K++ L I+ E N +++ F L Sbjct: 897 LAGLTRLRQICCHPALFVKE---YDGGSAKLEQLFEILGECKNAGKRVLLFSQFTEMLGM 953 Query: 84 LQKA---------FPQGRTLDKDPCTI-QEWNEGKIPLLFAHPASCGHGLNLQYGGNILV 133 + + + G+T + + +NEG+ L + G GLN+ G + ++ Sbjct: 954 IGRELGYHGVPFFYLDGQTPVAERLDLCNRFNEGERDLFLMSLKAGGTGLNVT-GADTVI 1012 Query: 134 FFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDL 193 + LWW+ QQ +R + G K V V L+A+ T++E + + + K + + Sbjct: 1013 LYDLWWNPAVEQQAADR-----AHRIGQKNVVQVIRLVAEGTVEEKMYELQQKKKNLIEE 1067 Query: 194 LL 195 ++ Sbjct: 1068 II 1069 >gi|218900369|ref|YP_002448780.1| putative helicase [Bacillus cereus G9842] gi|218544351|gb|ACK96745.1| putative helicase [Bacillus cereus G9842] Length = 918 Score = 123 bits (310), Expect = 1e-26, Method: Composition-based stats. Identities = 46/212 (21%), Positives = 85/212 (40%), Gaps = 23/212 (10%) Query: 3 QYHKFQRELYCDLQG-ENIEAFN-SASKTVKCLQLANGAVYYDEEKHWKEVHDE--KIKA 58 Y + ++ +++G IE K Q+ N Y +E+ + V + K K Sbjct: 695 LYEQLVQDTLQNVEGLSGIERRGFILLMLNKLKQICNHPALYLKEEEPQNVVERSMKTKT 754 Query: 59 LEVIIE--KANAAPIIVAYHFN---SDLARLQK-------AFPQGRTLDKDP-CTIQEWN 105 L +IE K ++ + + L R+ + F G KD I+E+ Sbjct: 755 LMELIENIKDQNESCLIFTQYIGMGNMLKRVLEEQFGQRVLFLNGSVPKKDRDKMIEEFQ 814 Query: 106 EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 G + + G GLNL N ++ + WW+ Q +R + G KR V Sbjct: 815 NGTYDIFILSLKAGGTGLNLT-AANHVIHYDRWWNPAVENQATDR-----AYRIGQKRFV 868 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 V+ LI T++E + + L K ++ + ++ + Sbjct: 869 HVHKLITTGTLEEKIDEMLERKQSLNNAVITS 900 >gi|218233440|ref|YP_002370024.1| putative helicase [Bacillus cereus B4264] gi|218161397|gb|ACK61389.1| putative helicase [Bacillus cereus B4264] Length = 918 Score = 123 bits (310), Expect = 1e-26, Method: Composition-based stats. Identities = 46/212 (21%), Positives = 85/212 (40%), Gaps = 23/212 (10%) Query: 3 QYHKFQRELYCDLQG-ENIEAFN-SASKTVKCLQLANGAVYYDEEKHWKEVHDE--KIKA 58 Y + ++ +++G IE K Q+ N Y +E+ + V + K K Sbjct: 695 LYEQLVQDTLQNVEGLSGIERRGFILLMLNKLKQICNHPALYLKEEEPQNVVERSMKTKT 754 Query: 59 LEVIIE--KANAAPIIVAYHFN---SDLARLQK-------AFPQGRTLDKDP-CTIQEWN 105 L +IE K ++ + + L R+ + F G KD I+E+ Sbjct: 755 LMELIENIKDQNESCLIFTQYIGMGNMLKRVLEEKFGQRVLFLNGSVPKKDRDKMIEEFQ 814 Query: 106 EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 G + + G GLNL N ++ + WW+ Q +R + G KR V Sbjct: 815 NGTYDIFILSLKAGGTGLNLT-AANHVIHYDRWWNPAVENQATDR-----AYRIGQKRFV 868 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 V+ LI T++E + + L K ++ + ++ + Sbjct: 869 HVHKLITTGTLEEKIDEMLERKQSLNNAVITS 900 >gi|170726566|ref|YP_001760592.1| non-specific serine/threonine protein kinase [Shewanella woodyi ATCC 51908] gi|169811913|gb|ACA86497.1| Non-specific serine/threonine protein kinase [Shewanella woodyi ATCC 51908] Length = 1110 Score = 123 bits (310), Expect = 1e-26, Method: Composition-based stats. Identities = 29/150 (19%), Positives = 65/150 (43%), Gaps = 18/150 (12%) Query: 57 KALEVIIEKANAAPIIVAYHFNSDLARLQKAFP---------QGRTLDKDPCTIQEWNEG 107 L ++E + I++ F S L + + G++ D+ + + Sbjct: 946 DKLPGMLE--DGRRILIFSSFTSMLTLISELLESLSIPHVELTGKSRDR-ANLVNRFQNC 1002 Query: 108 KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFV 167 ++P+ + G GLNL ++++ WW+ QQ +R + G ++VFV Sbjct: 1003 EVPVFLISLKAGGAGLNLT-AADVVIHTDPWWNPAAEQQASDR-----AYRIGQDKSVFV 1056 Query: 168 YYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 Y LI ++T++E + + +K + + ++ Sbjct: 1057 YKLICKDTVEERIQRLQESKYNLAQSIYDS 1086 >gi|326445095|ref|ZP_08219829.1| SNF2/RAD54 family helicase [Streptomyces clavuligerus ATCC 27064] Length = 932 Score = 123 bits (310), Expect = 1e-26, Method: Composition-based stats. Identities = 38/212 (17%), Positives = 72/212 (33%), Gaps = 22/212 (10%) Query: 3 QYHKFQRELYCDLQGENIEAFNSASK--TVKCLQLANG-AVYYDEEKHWK-EVHDEKIKA 58 Y RE +Q A Q+ N A Y E + K+ Sbjct: 705 LYETVVRETMVQIQAAEGIARRGLVLKLLTSLRQICNHPAQYLKETASPRLAGRSGKLDL 764 Query: 59 LEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQ----------GRTLDKDPCTIQEWNE 106 + ++ A ++V + + Q G + P + + Sbjct: 765 FDDLLGVMLAEQQSVLVFTQYVEMAHLVSARLEQQNVNHRLLHGGTPVAARPALVDAFQR 824 Query: 107 GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVF 166 G P+ + G GL L + ++F WW+ Q +R + G + V Sbjct: 825 GDFPVFLLSLRAAGTGLTLTRAQH-VIFLDQWWNPAVMDQAADR-----AYRIGTRHPVQ 878 Query: 167 VYYLIAQNTIDELVLQRLRTKSTIQDLLLNAL 198 V+ LI++ T++E + + L K + D +L+ + Sbjct: 879 VHTLISEGTVEERIAELLAAKKDLADTVLSDV 910 >gi|296505669|ref|YP_003667369.1| SWF/SNF family helicase [Bacillus thuringiensis BMB171] gi|296326721|gb|ADH09649.1| SWF/SNF family helicase [Bacillus thuringiensis BMB171] Length = 918 Score = 123 bits (310), Expect = 1e-26, Method: Composition-based stats. Identities = 46/212 (21%), Positives = 85/212 (40%), Gaps = 23/212 (10%) Query: 3 QYHKFQRELYCDLQG-ENIEAFN-SASKTVKCLQLANGAVYYDEEKHWKEVHDE--KIKA 58 Y + ++ +++G IE K Q+ N Y +E+ + V + K K Sbjct: 695 LYEQLVQDTLQNVEGLSGIERRGFILLMLNKLKQICNHPALYLKEEEPQNVVERSMKTKT 754 Query: 59 LEVIIE--KANAAPIIVAYHFN---SDLARLQK-------AFPQGRTLDKDP-CTIQEWN 105 L +IE K ++ + + L R+ + F G KD I+E+ Sbjct: 755 LMELIENIKDQNESCLIFTQYIGMGNMLKRVLEEKFGQRVLFLNGSVPKKDRDKMIEEFQ 814 Query: 106 EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 G + + G GLNL N ++ + WW+ Q +R + G KR V Sbjct: 815 NGTYDIFILSLKAGGTGLNLT-AANHVIHYDRWWNPAVENQATDR-----AYRIGQKRFV 868 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 V+ LI T++E + + L K ++ + ++ + Sbjct: 869 HVHKLITTGTLEEKIDEMLERKQSLNNAVITS 900 >gi|206970363|ref|ZP_03231316.1| putative helicase [Bacillus cereus AH1134] gi|206734940|gb|EDZ52109.1| putative helicase [Bacillus cereus AH1134] Length = 918 Score = 123 bits (310), Expect = 1e-26, Method: Composition-based stats. Identities = 46/212 (21%), Positives = 85/212 (40%), Gaps = 23/212 (10%) Query: 3 QYHKFQRELYCDLQG-ENIEAFN-SASKTVKCLQLANGAVYYDEEKHWKEVHDE--KIKA 58 Y + ++ +++G IE K Q+ N Y +E+ + V + K K Sbjct: 695 LYEQLVQDTLQNVEGLSGIERRGFILLMLNKLKQICNHPALYLKEEEPQNVVERSMKTKT 754 Query: 59 LEVIIE--KANAAPIIVAYHFN---SDLARLQK-------AFPQGRTLDKDP-CTIQEWN 105 L +IE K ++ + + L R+ + F G KD I+E+ Sbjct: 755 LMELIENIKDQNESCLIFTQYIGMGNMLKRVLEEKFGQRVLFLNGSVPKKDRDKMIEEFQ 814 Query: 106 EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 G + + G GLNL N ++ + WW+ Q +R + G KR V Sbjct: 815 NGTYDIFILSLKAGGTGLNLT-AANHVIHYDRWWNPAVENQATDR-----AYRIGQKRFV 868 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 V+ LI T++E + + L K ++ + ++ + Sbjct: 869 HVHKLITTGTLEEKIDEMLERKQSLNNAVITS 900 >gi|297203431|ref|ZP_06920828.1| SNF2/RAD54 family helicase [Streptomyces sviceus ATCC 29083] gi|297148407|gb|EFH28976.1| SNF2/RAD54 family helicase [Streptomyces sviceus ATCC 29083] Length = 297 Score = 123 bits (309), Expect = 1e-26, Method: Composition-based stats. Identities = 38/213 (17%), Positives = 71/213 (33%), Gaps = 26/213 (12%) Query: 3 QYHKFQRELYCDLQGENIEAFNSASK--TVKCLQLANG-AVYYDEEKHWKEVH------- 52 Y RE ++ A Q+ + A+Y EE Sbjct: 66 LYEAVVRESLLAIETAQGIARRGLVLKLLGALKQICDHPALYLKEEVPPTAGERLVARSG 125 Query: 53 DEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFP----------QGRTLDKDPCTIQ 102 + + A +V + + G + + + Sbjct: 126 KLALLDELLDTLLAEDGSALVFTQYVGMARLITAHLAARAVPVDLLHGGTPVPERERMVD 185 Query: 103 EWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFK 162 + G IP+L + G GLNL G+ +V F WW+ +Q +R + G Sbjct: 186 RFQSGAIPVLVLSLKAAGTGLNLTRAGH-VVHFDRWWNPAVEEQATDR-----AYRIGQT 239 Query: 163 RAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 + V V+ LI + T+++ + + L +K + D +L Sbjct: 240 QPVQVHRLITEGTVEDRIAEMLESKRALADAIL 272 >gi|228968365|ref|ZP_04129360.1| Helicase, SNF2/RAD54 [Bacillus thuringiensis serovar sotto str. T04001] gi|228791331|gb|EEM38938.1| Helicase, SNF2/RAD54 [Bacillus thuringiensis serovar sotto str. T04001] Length = 856 Score = 123 bits (309), Expect = 1e-26, Method: Composition-based stats. Identities = 46/212 (21%), Positives = 85/212 (40%), Gaps = 23/212 (10%) Query: 3 QYHKFQRELYCDLQG-ENIEAFN-SASKTVKCLQLANGAVYYDEEKHWKEVHDE--KIKA 58 Y + ++ +++G IE K Q+ N Y +E+ + V + K K Sbjct: 633 LYEQLVQDTLQNVEGLSGIERRGFILLMLNKLKQICNHPALYLKEEEPQNVVERSMKTKT 692 Query: 59 LEVIIE--KANAAPIIVAYHFN---SDLARLQK-------AFPQGRTLDKDP-CTIQEWN 105 L +IE K ++ + + L R+ + F G KD I+E+ Sbjct: 693 LMELIENIKDQNESCLIFTQYIGMGNMLKRVLEEQFGQRVLFLNGSVPKKDRDKMIEEFQ 752 Query: 106 EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 G + + G GLNL N ++ + WW+ Q +R + G KR V Sbjct: 753 NGTYDIFILSLKAGGTGLNLT-AANHVIHYDRWWNPAVENQATDR-----AYRIGQKRFV 806 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 V+ LI T++E + + L K ++ + ++ + Sbjct: 807 HVHKLITTGTLEEKIDEMLERKQSLNNAVITS 838 >gi|228923978|ref|ZP_04087255.1| Helicase, SNF2/RAD54 [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] gi|228835777|gb|EEM81141.1| Helicase, SNF2/RAD54 [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] Length = 856 Score = 123 bits (309), Expect = 1e-26, Method: Composition-based stats. Identities = 46/212 (21%), Positives = 85/212 (40%), Gaps = 23/212 (10%) Query: 3 QYHKFQRELYCDLQG-ENIEAFN-SASKTVKCLQLANGAVYYDEEKHWKEVHDE--KIKA 58 Y + ++ +++G IE K Q+ N Y +E+ + V + K K Sbjct: 633 LYEQLVQDTLQNVEGLSGIERRGFILLMLNKLKQICNHPALYLKEEEPQNVVERSMKTKT 692 Query: 59 LEVIIE--KANAAPIIVAYHFN---SDLARLQK-------AFPQGRTLDKDP-CTIQEWN 105 L +IE K ++ + + L R+ + F G KD I+E+ Sbjct: 693 LMELIENIKDQNESCLIFTQYIGMGNMLKRVLEEQFGQRVLFLNGSVPKKDRDKMIEEFQ 752 Query: 106 EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 G + + G GLNL N ++ + WW+ Q +R + G KR V Sbjct: 753 NGTYDIFILSLKAGGTGLNLT-AANHVIHYDRWWNPAVENQATDR-----AYRIGQKRFV 806 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 V+ LI T++E + + L K ++ + ++ + Sbjct: 807 HVHKLITTGTLEEKIDEMLERKQSLNNAVITS 838 >gi|291234127|ref|XP_002737002.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent regulator of chromatin a5-like [Saccoglossus kowalevskii] Length = 1241 Score = 123 bits (309), Expect = 1e-26, Method: Composition-based stats. Identities = 40/212 (18%), Positives = 77/212 (36%), Gaps = 23/212 (10%) Query: 2 KQYHKFQRELYCDLQGENIEAFN---SASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKA 58 Y RE+ + + Q+ N Y + K H K+K Sbjct: 1015 ALYESLVREMMQKIIECKEKGQRNKYIFKILTHLKQICNHPANYLDSKPSIVEHSGKMKM 1074 Query: 59 LEVIIEK--ANAAPIIVAYHFNSDLARLQKAFP-----QGRTLD------KDPCTIQEWN 105 L ++E +++ + ++ + K + TL+ K I + Sbjct: 1075 LVELLEPILQQGEKVLIFSQYVRMISLMAKMLEHHFHIKPLTLEGSMSQIKRDKVIHAFK 1134 Query: 106 -EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA 164 E + + G GLNL N ++ + LW++ Q +R + G ++ Sbjct: 1135 TEPHQQVFIISLKAGGTGLNLTE-ANHVIHYDLWYNPAVENQATDR-----AYRIGQSKS 1188 Query: 165 VFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 VFVY +I + T +E + + + K + DL +N Sbjct: 1189 VFVYRMITEKTFEERIDEMIVKKKDLSDLSVN 1220 >gi|229112656|ref|ZP_04242192.1| Helicase, SNF2/RAD54 [Bacillus cereus Rock1-15] gi|228670788|gb|EEL26096.1| Helicase, SNF2/RAD54 [Bacillus cereus Rock1-15] Length = 856 Score = 123 bits (309), Expect = 1e-26, Method: Composition-based stats. Identities = 46/212 (21%), Positives = 85/212 (40%), Gaps = 23/212 (10%) Query: 3 QYHKFQRELYCDLQG-ENIEAFN-SASKTVKCLQLANGAVYYDEEKHWKEVHDE--KIKA 58 Y + ++ +++G IE K Q+ N Y +E+ + V + K K Sbjct: 633 LYEQLVQDTLQNVEGLSGIERRGFILLMLNKLKQICNHPALYLKEEEPQNVVERSMKTKT 692 Query: 59 LEVIIE--KANAAPIIVAYHFN---SDLARLQK-------AFPQGRTLDKDP-CTIQEWN 105 L +IE K ++ + + L R+ + F G KD I+E+ Sbjct: 693 LMELIENIKDQNESCLIFTQYIGMGNMLKRVLEEKFGQLVLFLNGSVPKKDRDKMIEEFQ 752 Query: 106 EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 G + + G GLNL N ++ + WW+ Q +R + G KR V Sbjct: 753 NGTYDIFILSLKAGGTGLNLT-AANHVIHYDRWWNPAVENQATDR-----AYRIGQKRFV 806 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 V+ LI T++E + + L K ++ + ++ + Sbjct: 807 HVHKLITTGTLEEKIDEMLERKQSLNNAVITS 838 >gi|228911082|ref|ZP_04074889.1| Helicase, SNF2/RAD54 [Bacillus thuringiensis IBL 200] gi|228848586|gb|EEM93433.1| Helicase, SNF2/RAD54 [Bacillus thuringiensis IBL 200] Length = 856 Score = 123 bits (309), Expect = 1e-26, Method: Composition-based stats. Identities = 46/212 (21%), Positives = 85/212 (40%), Gaps = 23/212 (10%) Query: 3 QYHKFQRELYCDLQG-ENIEAFN-SASKTVKCLQLANGAVYYDEEKHWKEVHDE--KIKA 58 Y + ++ +++G IE K Q+ N Y +E+ + V + K K Sbjct: 633 LYEQLVQDTLQNVEGLSGIERRGFILLMLNKLKQICNHPALYLKEEEPQNVVERSMKTKT 692 Query: 59 LEVIIE--KANAAPIIVAYHFN---SDLARLQK-------AFPQGRTLDKDP-CTIQEWN 105 L +IE K ++ + + L R+ + F G KD I+E+ Sbjct: 693 LMELIENIKDQNESCLIFTQYIGMGNMLKRVLEEQFGQRVLFLNGSVPKKDRDKMIEEFQ 752 Query: 106 EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 G + + G GLNL N ++ + WW+ Q +R + G KR V Sbjct: 753 NGTYDIFILSLKAGGTGLNLT-AANHVIHYDRWWNPAVENQATDR-----AYRIGQKRFV 806 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 V+ LI T++E + + L K ++ + ++ + Sbjct: 807 HVHKLITTGTLEEKIDEMLERKQSLNNAVITS 838 >gi|302527381|ref|ZP_07279723.1| SNF2/RAD54 family helicase [Streptomyces sp. AA4] gi|302436276|gb|EFL08092.1| SNF2/RAD54 family helicase [Streptomyces sp. AA4] Length = 873 Score = 123 bits (309), Expect = 1e-26, Method: Composition-based stats. Identities = 37/215 (17%), Positives = 77/215 (35%), Gaps = 22/215 (10%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSAS--KTVKCLQLANGAVYY--DEEKHWKEVHDEKIK 57 Y REL D+ + A Q+ N + + K++ Sbjct: 645 ALYEATVRELMADIAASDGMARRGRVVKLLAALKQICNHPAQFLGEPADSTLAGRSGKLE 704 Query: 58 ALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFP----------QGRTLDKDPCTIQEWN 105 L+ +++ A ++V + L++ G + + + + Sbjct: 705 LLDELLDTILAEDGAVLVFTQYVVMARLLERHLAARGVPSRLLHGGTPVARREELVCGFQ 764 Query: 106 EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 G +P+ + G GL L + +V + WW+ Q +R + G R V Sbjct: 765 NGDVPVFLLSLKAAGTGLTLTR-ADHVVHYDRWWNPAVEDQATDR-----AYRIGQTRPV 818 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKK 200 V+ L+A+ T+++ + LR K + D +L + + Sbjct: 819 QVHRLVAEGTVEDRIAAMLREKRALADAVLASGEA 853 >gi|229050914|ref|ZP_04194465.1| Helicase, SNF2/RAD54 [Bacillus cereus AH676] gi|228722459|gb|EEL73853.1| Helicase, SNF2/RAD54 [Bacillus cereus AH676] Length = 856 Score = 123 bits (309), Expect = 1e-26, Method: Composition-based stats. Identities = 46/212 (21%), Positives = 85/212 (40%), Gaps = 23/212 (10%) Query: 3 QYHKFQRELYCDLQG-ENIEAFN-SASKTVKCLQLANGAVYYDEEKHWKEVHDE--KIKA 58 Y + ++ +++G IE K Q+ N Y +E+ + V + K K Sbjct: 633 LYEQLVQDTLQNVEGLSGIERRGFILLMLNKLKQICNHPALYLKEEEPQNVVERSMKTKT 692 Query: 59 LEVIIE--KANAAPIIVAYHFN---SDLARLQK-------AFPQGRTLDKDP-CTIQEWN 105 L +IE K ++ + + L R+ + F G KD I+E+ Sbjct: 693 LMELIENIKDQNESCLIFTQYIGMGNMLKRVLEEKFGQRVLFLNGSVPKKDRDKMIEEFQ 752 Query: 106 EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 G + + G GLNL N ++ + WW+ Q +R + G KR V Sbjct: 753 NGTYDIFILSLKAGGTGLNLT-AANHVIHYDRWWNPAVENQATDR-----AYRIGQKRFV 806 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 V+ LI T++E + + L K ++ + ++ + Sbjct: 807 HVHKLITTGTLEEKIDEMLERKQSLNNAVITS 838 >gi|229193493|ref|ZP_04320440.1| Helicase, SNF2/RAD54 [Bacillus cereus ATCC 10876] gi|228590025|gb|EEK47897.1| Helicase, SNF2/RAD54 [Bacillus cereus ATCC 10876] Length = 856 Score = 123 bits (309), Expect = 1e-26, Method: Composition-based stats. Identities = 46/212 (21%), Positives = 85/212 (40%), Gaps = 23/212 (10%) Query: 3 QYHKFQRELYCDLQG-ENIEAFN-SASKTVKCLQLANGAVYYDEEKHWKEVHDE--KIKA 58 Y + ++ +++G IE K Q+ N Y +E+ + V + K K Sbjct: 633 LYEQLVQDTLQNVEGLSGIERRGFILLMLNKLKQICNHPALYLKEEEPQNVVERSMKTKT 692 Query: 59 LEVIIE--KANAAPIIVAYHFN---SDLARLQK-------AFPQGRTLDKDP-CTIQEWN 105 L +IE K ++ + + L R+ + F G KD I+E+ Sbjct: 693 LMELIENIKDQNESCLIFTQYIGMGNMLKRVLEEKFGQRVLFLNGSVPKKDRDKMIEEFQ 752 Query: 106 EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 G + + G GLNL N ++ + WW+ Q +R + G KR V Sbjct: 753 NGTYDIFILSLKAGGTGLNLT-AANHVIHYDRWWNPAVENQATDR-----AYRIGQKRFV 806 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 V+ LI T++E + + L K ++ + ++ + Sbjct: 807 HVHKLITTGTLEEKIDEMLERKQSLNNAVITS 838 >gi|255534042|ref|YP_003094414.1| SNF2-like protein [Pedobacter heparinus DSM 2366] gi|255347026|gb|ACU06352.1| SNF2-related protein [Pedobacter heparinus DSM 2366] Length = 964 Score = 123 bits (309), Expect = 1e-26, Method: Composition-based stats. Identities = 34/177 (19%), Positives = 65/177 (36%), Gaps = 18/177 (10%) Query: 29 TVKCLQLANGAVYYDEE-KHWKEVHDEKIKALEVIIEKANAAPIIVAYHF-NS------- 79 QLAN V DE + + L+ +++ +++ F Sbjct: 776 LTALRQLANHPVMIDETYTSDSGKFENVVHTLDNVLK--GGHKVLIFSQFVKHLNIFRQY 833 Query: 80 -DLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLW 138 + + A+ G T ++ + + + G GLNL + + W Sbjct: 834 LEEENISFAYLDGATKNRGEIVADFQKNTALKVFLISIKAGGVGLNLTEADYVFIL-DPW 892 Query: 139 WDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 W+ QQ I+R + G + VF+Y IA++T++E +L K + L+ Sbjct: 893 WNPAVEQQAIDR-----THRIGQDKKVFIYKFIAKDTVEEKILALQNRKKRLASSLI 944 >gi|301165746|emb|CBW25318.1| putative helicase [Bacteriovorax marinus SJ] Length = 1049 Score = 123 bits (309), Expect = 2e-26, Method: Composition-based stats. Identities = 39/180 (21%), Positives = 70/180 (38%), Gaps = 24/180 (13%) Query: 32 CLQLANGAVYYDEEK--HWKEVHDEKIK----ALEVIIEKANAAPIIVAYHFNSDLARLQ 85 LQL ++ ++K + KI+ LE IIE+ IV F + L +Q Sbjct: 856 LLQLRQSCLWQSPTAGLNYKNIASTKIEFLVEQLEQIIEE--GHQTIVFSQFTTYLDLIQ 913 Query: 86 K----------AFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFF 135 +++ K + ++ GK + + G GLNL + + Sbjct: 914 NTLSDKHWRLSRIDGSQSIKKRQQQVDDFQSGKSDVFLISLKAGGVGLNLTAASYVFIM- 972 Query: 136 SLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 WW+ Q I+R + G + + VY I +++++E VL+ K + LL Sbjct: 973 DPWWNPAVESQAIDR-----AHRIGQQNTLTVYRPIIKDSVEEKVLKLQEMKKQLFKDLL 1027 >gi|229087719|ref|ZP_04219842.1| Helicase, SNF2/RAD54 [Bacillus cereus Rock3-44] gi|228695554|gb|EEL48416.1| Helicase, SNF2/RAD54 [Bacillus cereus Rock3-44] Length = 858 Score = 123 bits (309), Expect = 2e-26, Method: Composition-based stats. Identities = 42/212 (19%), Positives = 78/212 (36%), Gaps = 23/212 (10%) Query: 3 QYHKFQRELYCDLQG-ENIEAFN-SASKTVKCLQLANG-AVYYDEEKHW-KEVHDEKIKA 58 Y + ++ +++G IE K Q+ N A+Y EE K + Sbjct: 635 LYEQLVQDTLQNIEGLTGIERRGFILLMLNKLKQICNHPALYLKEETPIDIVQRSMKTQT 694 Query: 59 LEVIIE--KANAAPIIVAYHFNSDLARLQKAFPQ-----------GRTLDKDPCTIQEWN 105 L +IE K ++ + LQK + + I+++ Sbjct: 695 LMDLIENIKDQNESCLIFTQYIGMGNMLQKILEEKFGQRVLFLNGSVPKAERDKMIEQFQ 754 Query: 106 EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 G + + G GLNL N ++ + WW+ Q +R + G KR V Sbjct: 755 NGTYDIFILSLKAGGTGLNLT-AANHVIHYDRWWNPAVENQATDR-----AYRIGQKRFV 808 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 V+ LI T++E + + L K ++ ++ + Sbjct: 809 HVHKLITTGTLEEKIDEMLERKQSLSSAIITS 840 >gi|229072708|ref|ZP_04205910.1| Helicase, SNF2/RAD54 [Bacillus cereus F65185] gi|229181505|ref|ZP_04308833.1| Helicase, SNF2/RAD54 [Bacillus cereus 172560W] gi|228602080|gb|EEK59573.1| Helicase, SNF2/RAD54 [Bacillus cereus 172560W] gi|228710684|gb|EEL62657.1| Helicase, SNF2/RAD54 [Bacillus cereus F65185] Length = 856 Score = 123 bits (309), Expect = 2e-26, Method: Composition-based stats. Identities = 46/212 (21%), Positives = 85/212 (40%), Gaps = 23/212 (10%) Query: 3 QYHKFQRELYCDLQG-ENIEAFN-SASKTVKCLQLANGAVYYDEEKHWKEVHDE--KIKA 58 Y + ++ +++G IE K Q+ N Y +E+ + V + K K Sbjct: 633 LYEQLVQDTLQNVEGLSGIERRGFILLMLNKLKQICNHPALYLKEEEPQNVVERSMKTKT 692 Query: 59 LEVIIE--KANAAPIIVAYHFN---SDLARLQK-------AFPQGRTLDKDP-CTIQEWN 105 L +IE K ++ + + L R+ + F G KD I+E+ Sbjct: 693 LMELIENIKDQNESCLIFTQYIGMGNMLKRVLEEKFGQRVLFLNGSVPKKDRDKMIEEFQ 752 Query: 106 EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 G + + G GLNL N ++ + WW+ Q +R + G KR V Sbjct: 753 NGTYDIFILSLKAGGTGLNLT-AANHVIHYDRWWNPAVENQATDR-----AYRIGQKRFV 806 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 V+ LI T++E + + L K ++ + ++ + Sbjct: 807 HVHKLITTGTLEEKIDEMLERKQSLNNAVITS 838 >gi|229147777|ref|ZP_04276120.1| Helicase, SNF2/RAD54 [Bacillus cereus BDRD-ST24] gi|228635790|gb|EEK92277.1| Helicase, SNF2/RAD54 [Bacillus cereus BDRD-ST24] Length = 856 Score = 123 bits (309), Expect = 2e-26, Method: Composition-based stats. Identities = 46/212 (21%), Positives = 85/212 (40%), Gaps = 23/212 (10%) Query: 3 QYHKFQRELYCDLQG-ENIEAFN-SASKTVKCLQLANGAVYYDEEKHWKEVHDE--KIKA 58 Y + ++ +++G IE K Q+ N Y +E+ + V + K K Sbjct: 633 LYEQLVQDTLQNVEGLSGIERRGFILLMLNKLKQICNHPALYLKEEEPQNVVERSMKTKT 692 Query: 59 LEVIIE--KANAAPIIVAYHFN---SDLARLQK-------AFPQGRTLDKDP-CTIQEWN 105 L +IE K ++ + + L R+ + F G KD I+E+ Sbjct: 693 LMELIENIKDQNESCLIFTQYIGMGNMLKRVLEEKFGQRVLFLNGSVPKKDRDKMIEEFQ 752 Query: 106 EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 G + + G GLNL N ++ + WW+ Q +R + G KR V Sbjct: 753 NGTYDIFILSLKAGGTGLNLT-AANHVIHYDRWWNPAVENQATDR-----AYRIGQKRFV 806 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 V+ LI T++E + + L K ++ + ++ + Sbjct: 807 HVHKLITTGTLEEKIDEMLERKQSLNNAVITS 838 >gi|228955491|ref|ZP_04117496.1| Helicase, SNF2/RAD54 [Bacillus thuringiensis serovar kurstaki str. T03a001] gi|228804283|gb|EEM50897.1| Helicase, SNF2/RAD54 [Bacillus thuringiensis serovar kurstaki str. T03a001] Length = 856 Score = 123 bits (308), Expect = 2e-26, Method: Composition-based stats. Identities = 46/212 (21%), Positives = 85/212 (40%), Gaps = 23/212 (10%) Query: 3 QYHKFQRELYCDLQG-ENIEAFN-SASKTVKCLQLANGAVYYDEEKHWKEVHDE--KIKA 58 Y + ++ +++G IE K Q+ N Y +E+ + V + K K Sbjct: 633 LYEQLVQDTLQNVEGLSGIERRGFILLMLNKLKQICNHPALYLKEEEPQNVVERSMKTKT 692 Query: 59 LEVIIE--KANAAPIIVAYHFN---SDLARLQK-------AFPQGRTLDKDP-CTIQEWN 105 L +IE K ++ + + L R+ + F G KD I+E+ Sbjct: 693 LMELIENIKDQNESCLIFTQYIGMGNMLKRVLEEKFGQRVLFLNGSVPKKDRDKMIEEFQ 752 Query: 106 EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 G + + G GLNL N ++ + WW+ Q +R + G KR V Sbjct: 753 NGTYDIFILSLKAGGTGLNLT-AANHVIHYDRWWNPAVENQATDR-----AYRIGQKRFV 806 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 V+ LI T++E + + L K ++ + ++ + Sbjct: 807 HVHKLITTGTLEEKIDEMLERKQSLNNAVITS 838 >gi|228961502|ref|ZP_04123113.1| Helicase, SNF2/RAD54 [Bacillus thuringiensis serovar pakistani str. T13001] gi|228798216|gb|EEM45218.1| Helicase, SNF2/RAD54 [Bacillus thuringiensis serovar pakistani str. T13001] Length = 856 Score = 123 bits (308), Expect = 2e-26, Method: Composition-based stats. Identities = 46/212 (21%), Positives = 85/212 (40%), Gaps = 23/212 (10%) Query: 3 QYHKFQRELYCDLQG-ENIEAFN-SASKTVKCLQLANGAVYYDEEKHWKEVHDE--KIKA 58 Y + ++ +++G IE K Q+ N Y +E+ + V + K K Sbjct: 633 LYEQLVQDTLQNVEGLSGIERRGFILLMLNKLKQICNHPALYLKEEEPQNVVERSMKTKT 692 Query: 59 LEVIIE--KANAAPIIVAYHFN---SDLARLQK-------AFPQGRTLDKDP-CTIQEWN 105 L +IE K ++ + + L R+ + F G KD I+E+ Sbjct: 693 LMELIENIKDQNESCLIFTQYIGMGNMLKRVLEEKFGQRVLFLNGSVPKKDRDKMIEEFQ 752 Query: 106 EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 G + + G GLNL N ++ + WW+ Q +R + G KR V Sbjct: 753 NGTYDIFILSLKAGGTGLNLT-AANHVIHYDRWWNPAVENQATDR-----AYRIGQKRFV 806 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 V+ LI T++E + + L K ++ + ++ + Sbjct: 807 HVHKLITTGTLEEKIDEMLERKQSLNNAVITS 838 >gi|307192391|gb|EFN75626.1| Putative DNA helicase Ino80 [Harpegnathos saltator] Length = 1449 Score = 123 bits (308), Expect = 2e-26, Method: Composition-based stats. Identities = 33/176 (18%), Positives = 71/176 (40%), Gaps = 21/176 (11%) Query: 44 EEKHWKEVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQKAF----------PQG 91 +K K+ L+ ++ + +++ + L++ Sbjct: 944 PDKQTLVTDAGKLSVLDSLLRRLKEQGHRVLIYSQMTKMIDLLEEYMYHRKHTFMRLDGS 1003 Query: 92 RTLDKDPCTIQEWNE-GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 + + ++ + I + + G G+NL + ++F+ W+ QQ ++R Sbjct: 1004 SKISDRRDMVADFQKRADIFVFLLSTRAGGLGINLT-AADTVIFYDSDWNPTVDQQAMDR 1062 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA--LKKETIH 204 + G + V VY LI + TI+E +LQR R KS IQ ++++ K +T+ Sbjct: 1063 -----AHRLGQTKQVTVYRLICKGTIEERILQRAREKSEIQRMVISGGNFKPDTLK 1113 >gi|229082458|ref|ZP_04214921.1| Helicase, SNF2/RAD54 [Bacillus cereus Rock4-2] gi|228700890|gb|EEL53413.1| Helicase, SNF2/RAD54 [Bacillus cereus Rock4-2] Length = 856 Score = 123 bits (308), Expect = 2e-26, Method: Composition-based stats. Identities = 46/212 (21%), Positives = 85/212 (40%), Gaps = 23/212 (10%) Query: 3 QYHKFQRELYCDLQG-ENIEAFN-SASKTVKCLQLANGAVYYDEEKHWKEVHDE--KIKA 58 Y + ++ +++G IE K Q+ N Y +E+ + V + K K Sbjct: 633 LYEQLVQDTLQNVEGLSGIERRGFILLMLNKLKQICNHPALYLKEEEPQNVVERSMKTKT 692 Query: 59 LEVIIE--KANAAPIIVAYHFN---SDLARLQK-------AFPQGRTLDKDP-CTIQEWN 105 L +IE K ++ + + L R+ + F G KD I+E+ Sbjct: 693 LMELIENIKDQNESCLIFTQYIGMGNMLKRVLEEKFGQRVLFLNGSVPKKDRDKMIEEFQ 752 Query: 106 EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 G + + G GLNL N ++ + WW+ Q +R + G KR V Sbjct: 753 NGTYDIFILSLKAGGTGLNLT-AANHVIHYDRWWNPAVENQATDR-----AYRIGQKRFV 806 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 V+ LI T++E + + L K ++ + ++ + Sbjct: 807 HVHKLITTGTLEEKIDEMLERKQSLNNAVITS 838 >gi|229153405|ref|ZP_04281583.1| Helicase, SNF2/RAD54 [Bacillus cereus m1550] gi|228630009|gb|EEK86660.1| Helicase, SNF2/RAD54 [Bacillus cereus m1550] Length = 856 Score = 123 bits (308), Expect = 2e-26, Method: Composition-based stats. Identities = 46/212 (21%), Positives = 85/212 (40%), Gaps = 23/212 (10%) Query: 3 QYHKFQRELYCDLQG-ENIEAFN-SASKTVKCLQLANGAVYYDEEKHWKEVHDE--KIKA 58 Y + ++ +++G IE K Q+ N Y +E+ + V + K K Sbjct: 633 LYEQLVQDTLQNVEGLSGIERRGFILLMLNKLKQICNHPALYLKEEEPQNVVERSMKTKT 692 Query: 59 LEVIIE--KANAAPIIVAYHFN---SDLARLQKA-------FPQGRTLDKDP-CTIQEWN 105 L +IE K ++ + + L R+ + F G KD I+E+ Sbjct: 693 LMELIENIKDQNESCLIFTQYIGMGNMLKRVLEEKFGQRVPFLNGSVPKKDRDKMIEEFQ 752 Query: 106 EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 G + + G GLNL N ++ + WW+ Q +R + G KR V Sbjct: 753 NGTYDIFILSLKAGGTGLNLT-AANHVIHYDRWWNPAVENQATDR-----AYRIGQKRFV 806 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 V+ LI T++E + + L K ++ + ++ + Sbjct: 807 HVHKLITTGTLEEKIDEMLERKQSLNNAVITS 838 >gi|326943035|gb|AEA18931.1| SWF/SNF family helicase [Bacillus thuringiensis serovar chinensis CT-43] Length = 918 Score = 123 bits (308), Expect = 2e-26, Method: Composition-based stats. Identities = 46/212 (21%), Positives = 85/212 (40%), Gaps = 23/212 (10%) Query: 3 QYHKFQRELYCDLQG-ENIEAFN-SASKTVKCLQLANGAVYYDEEKHWKEVHDE--KIKA 58 Y + ++ +++G IE K Q+ N Y +E+ + V + K K Sbjct: 695 LYEQLVQDTLQNVEGLSGIERRGFILLMLNKLKQICNHPALYLKEEEPQNVVERSMKTKI 754 Query: 59 LEVIIE--KANAAPIIVAYHFN---SDLARLQK-------AFPQGRTLDKDP-CTIQEWN 105 L +IE K ++ + + L R+ + F G KD I+E+ Sbjct: 755 LMELIENIKDQNESCLIFTQYIGMGNMLKRVLEEKFGQRVLFLNGSVPKKDRDKMIEEFQ 814 Query: 106 EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 G + + G GLNL N ++ + WW+ Q +R + G KR V Sbjct: 815 NGTYDIFILSLKAGGTGLNLT-AANHVIHYDRWWNPAVENQATDR-----AYRIGQKRFV 868 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 V+ LI T++E + + L K ++ + ++ + Sbjct: 869 HVHKLITTGTLEEKIDEMLERKQSLNNAVITS 900 >gi|329116851|ref|ZP_08245568.1| SNF2 family N-terminal domain protein [Streptococcus parauberis NCFD 2020] gi|326907256|gb|EGE54170.1| SNF2 family N-terminal domain protein [Streptococcus parauberis NCFD 2020] Length = 1031 Score = 123 bits (308), Expect = 2e-26, Method: Composition-based stats. Identities = 37/205 (18%), Positives = 71/205 (34%), Gaps = 25/205 (12%) Query: 5 HKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIE 64 + + D+ IE + + Q+ + + + K+ +L+ ++ Sbjct: 819 DRIRNSSDADINRRKIEILSG---ITRLRQICDTPSLFMDYD----GDSGKLDSLKTLLV 871 Query: 65 K--ANAAPIIVAYHFNSDLARLQKAFP----------QGRTLDKDPCTIQEWNEGKIPLL 112 + N ++ F L +K + + +N G Sbjct: 872 QIKENGHRALIFSQFRGMLDIAEKEMEALGLTHYKITGSTPANDRQEMTRAFNNGSKDAF 931 Query: 113 FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIA 172 + G GLNL G + +V LWW+ Q I R + G K V V+ LI Sbjct: 932 LISLKAGGVGLNLT-GADTVVLIDLWWNPAVEMQAISR-----AHRLGQKENVEVFRLIT 985 Query: 173 QNTIDELVLQRLRTKSTIQDLLLNA 197 + TI+E +L+ K + +L+ Sbjct: 986 RGTIEEKILEMQEGKRNLVTTVLDG 1010 >gi|171059597|ref|YP_001791946.1| non-specific serine/threonine protein kinase [Leptothrix cholodnii SP-6] gi|170777042|gb|ACB35181.1| Non-specific serine/threonine protein kinase [Leptothrix cholodnii SP-6] Length = 1449 Score = 123 bits (308), Expect = 2e-26, Method: Composition-based stats. Identities = 38/214 (17%), Positives = 69/214 (32%), Gaps = 27/214 (12%) Query: 2 KQYHKFQR------ELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEK 55 Y +R E G N ++ ++ + A + K Sbjct: 1223 AHYEALRRQALRDAERAMSADGAGQAHLNILAQLMRLRRAACDPRLVTPD---LVQPGAK 1279 Query: 56 IKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTLD----------KDPCTIQE 103 + A + + AN +V F LA L++ + + Sbjct: 1280 VMAFGELAAELVANGHKALVFSQFVDFLALLREPLDAAGLRYQYLDGSTPSAERTRRVAA 1339 Query: 104 WNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKR 163 + G+ + G GLNL + +V WW+ Q R + G +R Sbjct: 1340 FQAGEGDFFLISLKAGGFGLNLTV-ADYVVIADPWWNPAAEDQASGR-----AHRIGQQR 1393 Query: 164 AVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 V VY L+ + T++E ++ K + D +L A Sbjct: 1394 PVTVYRLVNKGTLEEKIVALHADKRELADSVLEA 1427 >gi|260201211|ref|ZP_05768702.1| helicase helZ [Mycobacterium tuberculosis T46] gi|289443605|ref|ZP_06433349.1| helicase helZ [Mycobacterium tuberculosis T46] gi|289416524|gb|EFD13764.1| helicase helZ [Mycobacterium tuberculosis T46] Length = 1009 Score = 123 bits (308), Expect = 2e-26, Method: Composition-based stats. Identities = 36/210 (17%), Positives = 66/210 (31%), Gaps = 25/210 (11%) Query: 3 QYHKFQRELYCDLQGEN--IEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 Y ++ ++ N + K Q+ N ++ K+ LE Sbjct: 780 LYQAVVADMMEKIENTEGIERRGNVLAAMAKLKQVCNHPAQLLHDRSPVGRRSGKVIRLE 839 Query: 61 VIIEKANAAPIIVAYHFNSDLARLQKAFP--------------QGRTLDKDPCTIQEWNE 106 I+ A ++ F L G + + + Sbjct: 840 EIL--AEGDRVLCFTQFTEFAELLVPHLAARFGRAARDIAYLHGGTPRKRRDEMVARFQS 897 Query: 107 GK-IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 G P+ + G GLNL N +V WW+ Q +R + G +R V Sbjct: 898 GDGPPIFLLSLKAGGTGLNLT-AANHVVHLDRWWNPAVENQATDR-----AFRIGQRRTV 951 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 V I T++E + + + K + DL++ Sbjct: 952 QVRKFICTGTLEEKIDEMIEEKKALADLVV 981 >gi|296328143|ref|ZP_06870674.1| Snf2 family helicase [Fusobacterium nucleatum subsp. nucleatum ATCC 23726] gi|296154655|gb|EFG95441.1| Snf2 family helicase [Fusobacterium nucleatum subsp. nucleatum ATCC 23726] Length = 225 Score = 123 bits (308), Expect = 2e-26, Method: Composition-based stats. Identities = 40/193 (20%), Positives = 71/193 (36%), Gaps = 25/193 (12%) Query: 21 EAFNSASKTVKCLQLANGA--VYYDEEKHWKEVHDEKIKALEVIIEKA--NAAPIIVAYH 76 + K Q+ +Y D KI A +IEK+ N I++ Sbjct: 26 NKIEVLAMLTKLRQICIDPRSLYED-----VSSSSSKINAYIELIEKSIENNQKILLFSS 80 Query: 77 FNSDLAR---------LQKAFPQGRTLD-KDPCTIQEWNEGKIPLLFAHPASCGHGLNLQ 126 F + L + G T K ++ + +PL + G GLNL Sbjct: 81 FTTVLDLVAQECDNLSIPYFMLTGETNKVKRKEMVENFQNEAVPLFLISLKAGGTGLNLT 140 Query: 127 YGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRT 186 ++++ WW++ Q +R + G + V ++ LI +NTI+E +L Sbjct: 141 K-ASVVIHLDPWWNISVQNQATDR-----AHRIGQEDTVQLFNLITKNTIEEKILNLQSK 194 Query: 187 KSTIQDLLLNALK 199 K + D+ + K Sbjct: 195 KKELSDIFVENSK 207 >gi|327403655|ref|YP_004344493.1| SNF2-like protein [Fluviicola taffensis DSM 16823] gi|327319163|gb|AEA43655.1| SNF2-related protein [Fluviicola taffensis DSM 16823] Length = 1124 Score = 123 bits (308), Expect = 2e-26, Method: Composition-based stats. Identities = 42/209 (20%), Positives = 72/209 (34%), Gaps = 21/209 (10%) Query: 2 KQYHKFQRELYCDLQGENI-----EAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKI 56 + Y ++ EL L E + + + K Q+ N +E KI Sbjct: 903 RVYDVYKTELKEYLMSEPDFTDGQSSMHVLAGLTKLRQICNSPALINENGVSYGEQSAKI 962 Query: 57 KALEVIIEKANAA-PIIVAYHFNSDLARLQKAFPQ---------GRTLDKDPCTIQEWNE 106 + L IE I+V F L +++A + G+T + Sbjct: 963 QELMEQIEDKKKHHKILVFSQFVGMLKLVERALEERSIPYSLLTGQTKKRKEVVNAFQEN 1022 Query: 107 GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVF 166 I + + G GLNL + + WW+ Q I+R + G + V Sbjct: 1023 EHIRVFLISLKAGGMGLNLTQ-ADYVYLLDPWWNPAVENQAIDR-----AYRIGQDKKVV 1076 Query: 167 VYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 I NTI+E +L+ + K + L+ Sbjct: 1077 AVRFITPNTIEEKILELQKRKQELVGDLV 1105 >gi|306834168|ref|ZP_07467288.1| Snf2 family protein [Streptococcus bovis ATCC 700338] gi|304423741|gb|EFM26887.1| Snf2 family protein [Streptococcus bovis ATCC 700338] Length = 1026 Score = 123 bits (308), Expect = 2e-26, Method: Composition-based stats. Identities = 39/212 (18%), Positives = 74/212 (34%), Gaps = 27/212 (12%) Query: 1 MKQYHKFQRELYCDLQGENIE--AFNSASKTVKCLQLA-NGAVYYDEEKHWKEVHDEKIK 57 + Q + +E +I S + Q+ +++ D K+ Sbjct: 808 LAQLRQM-QETIAGASDADINRRKIEILSGITRLRQICDTPSLFMDYNGE-----SGKLD 861 Query: 58 ALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQ----------GRTLDKDPCTIQEWN 105 +L ++ + N ++ F L +K + + + +N Sbjct: 862 SLRTLLIQVKENGHRALIFSQFRGMLDIAEKEMEELGLTSYKITGSTPANARQEMTRAFN 921 Query: 106 EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 G + G GLNL G + ++ LWW+ Q I R + G K V Sbjct: 922 NGSKDTFLISLKAGGVGLNLT-GADTVILIDLWWNPAVEMQAISR-----AHRIGQKANV 975 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 VY LI + TI+E +L+ +K + +L+ Sbjct: 976 EVYRLITRGTIEEKILEMQESKKNLVTTVLDG 1007 >gi|195978760|ref|YP_002124004.1| SWF/SNF family helicase [Streptococcus equi subsp. zooepidemicus MGCS10565] gi|195975465|gb|ACG62991.1| SWF/SNF family helicase [Streptococcus equi subsp. zooepidemicus MGCS10565] Length = 1034 Score = 123 bits (308), Expect = 2e-26, Method: Composition-based stats. Identities = 38/213 (17%), Positives = 74/213 (34%), Gaps = 27/213 (12%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASK-----TVKCLQLANGAVYYDEEKHWKEVHDEKI 56 Y R++ L + N + + Q+ + + + + K+ Sbjct: 812 AIYLAQLRQMQERLSAATDDDINRSKLEILSGITRLRQICDTPSLFMD----YQGGSGKL 867 Query: 57 KALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQ----------GRTLDKDPCTIQEW 104 L ++ + N ++ F LA +++ Q + + + Sbjct: 868 DNLRTLLLQIKENGHRALLFSQFKGMLALVKQEIDQLGLSSYTITGSTPANDRQEMTRAF 927 Query: 105 NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA 164 N G + G GLNL G + ++ LWW+ Q I R + G + Sbjct: 928 NNGSKDAFLISLKAGGVGLNLT-GADTVILIDLWWNPAVEMQAISR-----AHRIGQEDN 981 Query: 165 VFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 V VY LI + TI+E +L+ K + +L+ Sbjct: 982 VEVYRLITRGTIEEKMLELQENKRHLITTVLDG 1014 >gi|328856768|gb|EGG05888.1| hypothetical protein MELLADRAFT_36442 [Melampsora larici-populina 98AG31] Length = 878 Score = 123 bits (308), Expect = 2e-26, Method: Composition-based stats. Identities = 33/158 (20%), Positives = 69/158 (43%), Gaps = 19/158 (12%) Query: 51 VHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQK----------AFPQGRTLDKDP 98 + K+ L+ ++++ +++ + + +++ T+ + Sbjct: 656 LDSGKLARLDSLLQELKTGGHRVLIYFQMTRMIDLMEEYLSFRHYRYLRLDGSSTISERR 715 Query: 99 CTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 + +W +I + + G G+NL + ++F+ W+ QQ ++R Sbjct: 716 DMVMDWQTRPEIFIFLLSTRAGGLGINLT-AADTVIFYDCDWNPSNDQQAMDR-----AH 769 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 + G KR V VY LI TIDE +L+ RTK T+QD ++ Sbjct: 770 RLGQKRQVTVYRLITSGTIDERILKLARTKKTVQDAVV 807 >gi|307947430|ref|ZP_07662764.1| helicase superfamily protein II [Roseibium sp. TrichSKD4] gi|307769572|gb|EFO28799.1| helicase superfamily protein II [Roseibium sp. TrichSKD4] Length = 906 Score = 123 bits (308), Expect = 2e-26, Method: Composition-based stats. Identities = 39/188 (20%), Positives = 72/188 (38%), Gaps = 20/188 (10%) Query: 26 ASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIE--KANAAPIIVAYHFNSDLAR 83 + ++ Q+ N + ++ W E K+ L I E + ++V F + Sbjct: 699 LATLMRLKQICNHPSQWLDDDDWNEADSGKLARLREISEVVASRQEKMLVFTQFQEVIEP 758 Query: 84 LQKAFP-----------QGRTLDKDPCTIQEWNEGK-IPLLFAHPASCGHGLNLQYGGNI 131 L+ G + K + + E + IP + G GL L + Sbjct: 759 LRTFLGSVFGKDGLVLHGGTAVAKRKKLVSAFQEDETIPFFILSLKAGGSGLTLT-AASH 817 Query: 132 LVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQ 191 +V F WW+ Q +R + G K+ V V+ L+ + T++E + + TK + Sbjct: 818 VVHFDRWWNPAVENQATDR-----AYRIGQKKNVLVHKLLCRGTMEEKIDAMINTKQELA 872 Query: 192 DLLLNALK 199 D LL+ K Sbjct: 873 DALLSKTK 880 >gi|94989794|ref|YP_597894.1| SWF/SNF family helicase [Streptococcus pyogenes MGAS10270] gi|94543302|gb|ABF33350.1| SWF/SNF family helicase [Streptococcus pyogenes MGAS10270] Length = 1032 Score = 123 bits (308), Expect = 2e-26, Method: Composition-based stats. Identities = 35/205 (17%), Positives = 74/205 (36%), Gaps = 25/205 (12%) Query: 5 HKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIE 64 + + D+ + IE + + Q+ + + + K+ +L +++ Sbjct: 820 DQIRNSSDVDISRQKIEILSG---ITRLRQICDTPSLFMN----YQGKSGKLDSLRILLT 872 Query: 65 K--ANAAPIIVAYHFNSDLARLQKAFP----------QGRTLDKDPCTIQEWNEGKIPLL 112 + N ++ F L ++ ++ + +N G Sbjct: 873 QIKENGHRALIFSQFRGMLDLAKQEMTALGLTSYQMTGSTPANERQEMTRAFNNGSKDAF 932 Query: 113 FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIA 172 + G G+NL G + ++ LWW+ Q I R + G K V VY LI Sbjct: 933 LISLKAGGVGINLT-GADTVILIDLWWNPAVEMQAISR-----AYRIGQKENVEVYRLIT 986 Query: 173 QNTIDELVLQRLRTKSTIQDLLLNA 197 + TI+E +L+ +K + +L+ Sbjct: 987 RGTIEEKILELQESKRNLVTTVLDG 1011 >gi|30023277|ref|NP_834908.1| SWF/SNF family helicase [Bacillus cereus ATCC 14579] gi|29898838|gb|AAP12109.1| SWF/SNF family helicase [Bacillus cereus ATCC 14579] Length = 918 Score = 123 bits (308), Expect = 2e-26, Method: Composition-based stats. Identities = 46/212 (21%), Positives = 85/212 (40%), Gaps = 23/212 (10%) Query: 3 QYHKFQRELYCDLQG-ENIEAFN-SASKTVKCLQLANGAVYYDEEKHWKEVHDE--KIKA 58 Y + ++ +++G IE K Q+ N Y +E+ + V + K K Sbjct: 695 LYEQLVQDTLQNVEGLSGIERRGFILLMLNKLKQICNHPALYLKEEEPQNVVERSMKTKT 754 Query: 59 LEVIIE--KANAAPIIVAYHFN---SDLARLQK-------AFPQGRTLDKDP-CTIQEWN 105 L +IE K ++ + + L R+ + F G KD I+E+ Sbjct: 755 LIELIENIKDQNESCLIFTQYIGMGNMLKRVLEEKFGQRVLFLNGSVPKKDRDKMIEEFQ 814 Query: 106 EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 G + + G GLNL N ++ + WW+ Q +R + G KR V Sbjct: 815 NGTYDIFILSLKAGGTGLNLT-AANHVIHYDRWWNPAVENQATDR-----AYRIGQKRFV 868 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 V+ LI T++E + + L K ++ + ++ + Sbjct: 869 HVHKLITTGTLEEKIDEMLERKQSLNNAVITS 900 >gi|19745454|ref|NP_606590.1| putative SNF helicase [Streptococcus pyogenes MGAS8232] gi|19747568|gb|AAL97089.1| putative SNF helicase [Streptococcus pyogenes MGAS8232] Length = 1031 Score = 123 bits (308), Expect = 2e-26, Method: Composition-based stats. Identities = 35/205 (17%), Positives = 74/205 (36%), Gaps = 25/205 (12%) Query: 5 HKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIE 64 + + D+ + IE + + Q+ + + + K+ +L +++ Sbjct: 819 DQIRNSSDVDISRQKIEILSG---ITRLRQICDTPSLFMN----YQGKSGKLDSLRILLT 871 Query: 65 K--ANAAPIIVAYHFNSDLARLQKAFP----------QGRTLDKDPCTIQEWNEGKIPLL 112 + N ++ F L ++ ++ + +N G Sbjct: 872 QIKENGHRALIFSQFRGMLDLAKQEMTALGLTSYQMTGSTPANERQEMTRAFNNGSKDAF 931 Query: 113 FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIA 172 + G G+NL G + ++ LWW+ Q I R + G K V VY LI Sbjct: 932 LISLKAGGVGINLT-GADTVILIDLWWNPAVEMQAISR-----AYRIGQKENVEVYRLIT 985 Query: 173 QNTIDELVLQRLRTKSTIQDLLLNA 197 + TI+E +L+ +K + +L+ Sbjct: 986 RGTIEEKILELQESKRNLVTTVLDG 1010 >gi|312130874|ref|YP_003998214.1| snf2-related protein [Leadbetterella byssophila DSM 17132] gi|311907420|gb|ADQ17861.1| SNF2-related protein [Leadbetterella byssophila DSM 17132] Length = 962 Score = 123 bits (308), Expect = 2e-26, Method: Composition-based stats. Identities = 38/177 (21%), Positives = 66/177 (37%), Gaps = 18/177 (10%) Query: 29 TVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEK-ANAAPIIVAYHFNSDL------ 81 K Q+AN H+ + I L I E + + ++ F L Sbjct: 774 LSKLRQIANHPAMVLP--HYSGGSGKGIDILSRIKEVVSEGSKTLIFSQFVKHLKFVAEG 831 Query: 82 ---ARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLW 138 ++ + G T ++ + N + + + G GLNL N + W Sbjct: 832 LRAEKIPYLYLDGSTKNRMELVNRFQNSAEELIFLISLKAGGVGLNLTAAEN-VFLLDPW 890 Query: 139 WDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 W+ Q ++R + G + VF Y I QNTI+E +++ TK + D L+ Sbjct: 891 WNPAIEAQAVDR-----AHRIGQTKTVFSYKFITQNTIEEKIVELQNTKRQLFDELI 942 >gi|217962731|ref|YP_002341307.1| SNF2 family helicase [Bacillus cereus AH187] gi|222098706|ref|YP_002532764.1| helicase, putative [Bacillus cereus Q1] gi|217063978|gb|ACJ78228.1| SNF2 family helicase [Bacillus cereus AH187] gi|221242765|gb|ACM15475.1| helicase, putative [Bacillus cereus Q1] Length = 918 Score = 123 bits (308), Expect = 2e-26, Method: Composition-based stats. Identities = 39/212 (18%), Positives = 79/212 (37%), Gaps = 23/212 (10%) Query: 3 QYHKFQRELYCDLQG-ENIEAFN-SASKTVKCLQLANGAVYYDEEKHWKEVHDE--KIKA 58 Y + ++ +++G IE K Q+ N Y +E K++ + K Sbjct: 695 LYEQLVQDTLQNVEGLSGIERRGFILLMLNKLKQICNHPALYLKETEPKDIIERSMKTST 754 Query: 59 LEVIIE--KANAAPIIVAYHFNSDLARLQKAFPQ-----------GRTLDKDPCTIQEWN 105 L +IE K ++ + L+ + + I+++ Sbjct: 755 LMELIENIKDQNESCLIFTQYIGMGNMLKDVLEKHFGQRVLFLNGSVPKKERDKMIEQFQ 814 Query: 106 EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 G + + G GLNL N ++ + WW+ Q +R + G KR V Sbjct: 815 NGTYDIFILSLKAGGTGLNLT-AANHVIHYDRWWNPAVENQATDR-----AYRIGQKRFV 868 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 V+ LI T++E + + L K ++ + ++ + Sbjct: 869 HVHKLITTGTLEEKIDEMLERKQSLNNAVITS 900 >gi|156743267|ref|YP_001433396.1| non-specific serine/threonine protein kinase [Roseiflexus castenholzii DSM 13941] gi|156234595|gb|ABU59378.1| Non-specific serine/threonine protein kinase [Roseiflexus castenholzii DSM 13941] Length = 1066 Score = 123 bits (308), Expect = 2e-26, Method: Composition-based stats. Identities = 35/180 (19%), Positives = 68/180 (37%), Gaps = 20/180 (11%) Query: 29 TVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQK 86 ++ Q+ N D K + L +E N ++ F L +++ Sbjct: 878 LLRLRQICNHPRLVDAS---FRGSSGKFELLLETLETLNAEGHKALIFSQFVQMLHLIRE 934 Query: 87 AFP---------QGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSL 137 A G+T + + N+ +P + G GLNL + ++ Sbjct: 935 ALDTRSIRYAYLDGQTHQRQQEVDRFQNDETLPFFLISLKAGGVGLNLT-AADYVIHVDP 993 Query: 138 WWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 WW+ Q +R + G ++ +FVY LI +N+++E +L + K + L+ A Sbjct: 994 WWNPAVEMQATDR-----THRIGQEKPIFVYKLITRNSVEEKILSLQQRKRELVAQLITA 1048 >gi|324329191|gb|ADY24451.1| helicase, putative [Bacillus thuringiensis serovar finitimus YBT-020] Length = 918 Score = 122 bits (307), Expect = 2e-26, Method: Composition-based stats. Identities = 39/212 (18%), Positives = 78/212 (36%), Gaps = 23/212 (10%) Query: 3 QYHKFQRELYCDLQG-ENIEAFN-SASKTVKCLQLANGAVYYDEEKHWKEVHDE--KIKA 58 Y + ++ +++G IE K Q+ N Y +E K + + K Sbjct: 695 LYEQLVQDTLQNVEGLSGIERRGFILLMLNKLKQICNHPALYLKETEPKNIIERSMKTST 754 Query: 59 LEVIIE--KANAAPIIVAYHFNSDLARLQKAFPQ-----------GRTLDKDPCTIQEWN 105 L +IE K ++ + L+ + + I+++ Sbjct: 755 LMELIENIKDQNESCLIFTQYIGMGNMLKDVLEKHFGQRVLFLNGSVPKKERDKMIEQFQ 814 Query: 106 EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 G + + G GLNL N ++ + WW+ Q +R + G KR V Sbjct: 815 NGTYDIFILSLKAGGTGLNLT-AANHVIHYDRWWNPAVENQATDR-----AYRIGQKRFV 868 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 V+ LI T++E + + L K ++ + ++ + Sbjct: 869 HVHKLITTGTLEEKIDEMLERKQSLNNAVITS 900 >gi|229164183|ref|ZP_04292118.1| Helicase, SNF2/RAD54 [Bacillus cereus R309803] gi|228619300|gb|EEK76191.1| Helicase, SNF2/RAD54 [Bacillus cereus R309803] Length = 840 Score = 122 bits (307), Expect = 2e-26, Method: Composition-based stats. Identities = 40/212 (18%), Positives = 81/212 (38%), Gaps = 23/212 (10%) Query: 3 QYHKFQRELYCDLQG-ENIEAFN-SASKTVKCLQLANGAVYYDEEKHWKEVHDE--KIKA 58 Y + ++ +++G IE K Q+ N Y +E+ + V + K K Sbjct: 617 LYEQLVQDTLQNVEGLSGIERRGFILLMLNKLKQICNHPALYLKEEEPQNVVERSMKTKT 676 Query: 59 LEVIIE--KANAAPIIVAYHFNSDLARLQKAFPQ-----------GRTLDKDPCTIQEWN 105 L +IE K ++ + L++ + + I+++ Sbjct: 677 LMELIENIKDQNESCLIFTQYIGMGNMLKRVLEENFGQRVLFLNGSVPKKERDKMIEQFQ 736 Query: 106 EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 G + + G GLNL N ++ + WW+ Q +R + G KR V Sbjct: 737 NGTYDIFILSLKAGGTGLNLT-AANHVIHYDRWWNPAVENQATDR-----AYRIGQKRFV 790 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 V+ LI T++E + + L K ++ + ++ + Sbjct: 791 HVHKLITTGTLEEKIDEMLERKQSLNNAVITS 822 >gi|206976890|ref|ZP_03237792.1| SNF2 family helicase [Bacillus cereus H3081.97] gi|206744856|gb|EDZ56261.1| SNF2 family helicase [Bacillus cereus H3081.97] Length = 918 Score = 122 bits (307), Expect = 2e-26, Method: Composition-based stats. Identities = 39/212 (18%), Positives = 79/212 (37%), Gaps = 23/212 (10%) Query: 3 QYHKFQRELYCDLQG-ENIEAFN-SASKTVKCLQLANGAVYYDEEKHWKEVHDE--KIKA 58 Y + ++ +++G IE K Q+ N Y +E K++ + K Sbjct: 695 LYEQLVQDTLQNVEGLSGIERRGFILLMLNKLKQICNHPALYLKETEPKDIIERSMKTST 754 Query: 59 LEVIIE--KANAAPIIVAYHFNSDLARLQKAFPQ-----------GRTLDKDPCTIQEWN 105 L +IE K ++ + L+ + + I+++ Sbjct: 755 LMELIENIKDQNESCLIFTQYIGMGNMLKDVLEKHFGQRVLFLNGSVPKKERDKMIEQFQ 814 Query: 106 EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 G + + G GLNL N ++ + WW+ Q +R + G KR V Sbjct: 815 NGTYDIFILSLKAGGTGLNLT-AANHVIHYDRWWNPAVENQATDR-----AYRIGQKRFV 868 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 V+ LI T++E + + L K ++ + ++ + Sbjct: 869 HVHKLITTGTLEEKIDEMLERKQSLNNAVITS 900 >gi|23099744|ref|NP_693210.1| helicase [Oceanobacillus iheyensis HTE831] gi|22777974|dbj|BAC14245.1| helicase (swi/snf family) [Oceanobacillus iheyensis HTE831] Length = 1051 Score = 122 bits (307), Expect = 2e-26, Method: Composition-based stats. Identities = 36/184 (19%), Positives = 79/184 (42%), Gaps = 21/184 (11%) Query: 26 ASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANA--APIIVAYHFNSDLAR 83 + + Q+ + + + K K++ L+ +I+ A+ +++ F S L Sbjct: 854 LAGITRLRQICCHPSLFVRKYNDK---SAKLERLKQLIKDASRANKRLLIFSQFTSMLQL 910 Query: 84 L---------QKAFPQGRTLDKDPCTI-QEWNEGKIPLLFAHPASCGHGLNLQYGGNILV 133 + + G T ++ I + +N+G + + G GLNL G + ++ Sbjct: 911 IGKELRNKDILYYYIDGETPAEERVEICRAFNQGNREVCLISLKAGGTGLNL-VGADTVI 969 Query: 134 FFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDL 193 + +WW+ +Q I+R + G + V V L+++ TI+E + + R K + + Sbjct: 970 LYDVWWNPAVEEQAIDR-----AHRIGQQSEVTVIRLLSEGTIEEKMYELQRKKRELMNY 1024 Query: 194 LLNA 197 L+N Sbjct: 1025 LVNG 1028 >gi|301056711|ref|YP_003794922.1| SNF2 family helicase [Bacillus anthracis CI] gi|300378880|gb|ADK07784.1| SNF2 family helicase [Bacillus cereus biovar anthracis str. CI] Length = 918 Score = 122 bits (307), Expect = 2e-26, Method: Composition-based stats. Identities = 39/212 (18%), Positives = 79/212 (37%), Gaps = 23/212 (10%) Query: 3 QYHKFQRELYCDLQG-ENIEAFN-SASKTVKCLQLANGAVYYDEEKHWKEVHDE--KIKA 58 Y + ++ +++G IE K Q+ N Y +E K++ + K Sbjct: 695 LYEQLVQDTLQNVEGLSGIERRGFILLMLNKLKQICNHPALYLKETEPKDIIERSMKTST 754 Query: 59 LEVIIE--KANAAPIIVAYHFNSDLARLQKAFPQ-----------GRTLDKDPCTIQEWN 105 L +IE K ++ + L+ + + I+++ Sbjct: 755 LMELIENIKDQNESCLIFTQYIGMGNMLKNVLEEHFGQRVLFLNGSVPKKERDKMIEQFQ 814 Query: 106 EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 G + + G GLNL N ++ + WW+ Q +R + G KR V Sbjct: 815 NGTYDIFILSLKAGGTGLNLT-AANHVIHYDRWWNPAVENQATDR-----AYRIGQKRFV 868 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 V+ LI T++E + + L K ++ + ++ + Sbjct: 869 HVHKLITTGTLEEKIDEMLERKQSLNNAVITS 900 >gi|94987919|ref|YP_596020.1| SWF/SNF family helicase [Streptococcus pyogenes MGAS9429] gi|94991803|ref|YP_599902.1| SWF/SNF family helicase [Streptococcus pyogenes MGAS2096] gi|94541427|gb|ABF31476.1| SWF/SNF family helicase [Streptococcus pyogenes MGAS9429] gi|94545311|gb|ABF35358.1| SWF/SNF family helicase [Streptococcus pyogenes MGAS2096] Length = 1032 Score = 122 bits (307), Expect = 2e-26, Method: Composition-based stats. Identities = 35/205 (17%), Positives = 75/205 (36%), Gaps = 25/205 (12%) Query: 5 HKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIE 64 + + D+ + IE + + Q+ + + + + K+ +L +++ Sbjct: 820 DQIRNSSDVDISRQKIEILSG---ITRLRQICDTPSLFMD----YQGKSGKLDSLRILLT 872 Query: 65 K--ANAAPIIVAYHFNSDLARLQKAFP----------QGRTLDKDPCTIQEWNEGKIPLL 112 + N ++ F L ++ ++ + +N G Sbjct: 873 QIKENGHRALIFSQFRGMLDLAKQEMTALGLTSYQMTGSTPANERQEMTRAFNNGSKDAF 932 Query: 113 FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIA 172 + G G+NL G + ++ LWW+ Q I R + G K V VY LI Sbjct: 933 LISLKAGGVGINL-PGADTVILIDLWWNPAVEMQAISR-----AYRIGQKENVEVYRLIT 986 Query: 173 QNTIDELVLQRLRTKSTIQDLLLNA 197 + TI+E +L+ +K + +L+ Sbjct: 987 RGTIEEKILELQESKRNLVTTVLDG 1011 >gi|228975316|ref|ZP_04135873.1| Helicase, SNF2/RAD54 [Bacillus thuringiensis serovar thuringiensis str. T01001] gi|228981952|ref|ZP_04142247.1| Helicase, SNF2/RAD54 [Bacillus thuringiensis Bt407] gi|228778064|gb|EEM26336.1| Helicase, SNF2/RAD54 [Bacillus thuringiensis Bt407] gi|228784449|gb|EEM32471.1| Helicase, SNF2/RAD54 [Bacillus thuringiensis serovar thuringiensis str. T01001] Length = 855 Score = 122 bits (307), Expect = 2e-26, Method: Composition-based stats. Identities = 46/212 (21%), Positives = 85/212 (40%), Gaps = 23/212 (10%) Query: 3 QYHKFQRELYCDLQG-ENIEAFN-SASKTVKCLQLANGAVYYDEEKHWKEVHDE--KIKA 58 Y + ++ +++G IE K Q+ N Y +E+ + V + K K Sbjct: 632 LYEQLVQDTLQNVEGLSGIERRGFILLMLNKLKQICNHPALYLKEEEPQNVVERSMKTKI 691 Query: 59 LEVIIE--KANAAPIIVAYHFN---SDLARLQK-------AFPQGRTLDKDP-CTIQEWN 105 L +IE K ++ + + L R+ + F G KD I+E+ Sbjct: 692 LMELIENIKDQNESCLIFTQYIGMGNMLKRVLEEKFGQRVLFLNGSVPKKDRDKMIEEFQ 751 Query: 106 EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 G + + G GLNL N ++ + WW+ Q +R + G KR V Sbjct: 752 NGTYDIFILSLKAGGTGLNLT-AANHVIHYDRWWNPAVENQATDR-----AYRIGQKRFV 805 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 V+ LI T++E + + L K ++ + ++ + Sbjct: 806 HVHKLITTGTLEEKIDEMLERKQSLNNAVITS 837 >gi|94993679|ref|YP_601777.1| SWF/SNF family helicase [Streptococcus pyogenes MGAS10750] gi|94547187|gb|ABF37233.1| SWF/SNF family helicase [Streptococcus pyogenes MGAS10750] Length = 1032 Score = 122 bits (307), Expect = 2e-26, Method: Composition-based stats. Identities = 35/205 (17%), Positives = 74/205 (36%), Gaps = 25/205 (12%) Query: 5 HKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIE 64 + + D+ + IE + + Q+ + + + K+ +L +++ Sbjct: 820 DQIRNSSDVDISRQKIEILSG---ITRLRQICDTPSLFMN----YQGKSGKLDSLRILLT 872 Query: 65 K--ANAAPIIVAYHFNSDLARLQKAFP----------QGRTLDKDPCTIQEWNEGKIPLL 112 + N ++ F L ++ ++ + +N G Sbjct: 873 QIKENGHRALIFSQFRGMLDLAKQEMTALGLTSYQMTGSTPANERQEMTRAFNNGSKDAF 932 Query: 113 FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIA 172 + G G+NL G + ++ LWW+ Q I R + G K V VY LI Sbjct: 933 LISLKAGGVGINLT-GADTVILIDLWWNPAVEMQAISR-----AYRIGQKENVEVYRLIT 986 Query: 173 QNTIDELVLQRLRTKSTIQDLLLNA 197 + TI+E +L+ +K + +L+ Sbjct: 987 RGTIEEKILELQESKRNLVTTVLDG 1011 >gi|225867216|ref|YP_002752594.1| putative helicase [Bacillus cereus 03BB102] gi|225786779|gb|ACO26996.1| putative helicase [Bacillus cereus 03BB102] Length = 918 Score = 122 bits (307), Expect = 2e-26, Method: Composition-based stats. Identities = 39/212 (18%), Positives = 79/212 (37%), Gaps = 23/212 (10%) Query: 3 QYHKFQRELYCDLQG-ENIEAFN-SASKTVKCLQLANGAVYYDEEKHWKEVHDE--KIKA 58 Y + ++ +++G IE K Q+ N Y +E K++ + K Sbjct: 695 LYEQLVQDTLQNVEGLSGIERRGFILLMLNKLKQICNHPALYLKETEPKDIIERSMKTST 754 Query: 59 LEVIIE--KANAAPIIVAYHFNSDLARLQKAFPQ-----------GRTLDKDPCTIQEWN 105 L +IE K ++ + L+ + + I+++ Sbjct: 755 LMELIENIKDQNESCLIFTQYIGMGNMLKNVLEEHFGQRVLFLNGSVPKKERDKMIEQFQ 814 Query: 106 EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 G + + G GLNL N ++ + WW+ Q +R + G KR V Sbjct: 815 NGTYDIFILSLKAGGTGLNLT-AANHVIHYDRWWNPAVENQATDR-----AYRIGQKRFV 868 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 V+ LI T++E + + L K ++ + ++ + Sbjct: 869 HVHKLITTGTLEEKIDEMLERKQSLNNAVITS 900 >gi|49481223|ref|YP_039235.1| SNF2 family helicase [Bacillus thuringiensis serovar konkukian str. 97-27] gi|49332779|gb|AAT63425.1| SNF2 family helicase [Bacillus thuringiensis serovar konkukian str. 97-27] Length = 918 Score = 122 bits (307), Expect = 2e-26, Method: Composition-based stats. Identities = 39/212 (18%), Positives = 79/212 (37%), Gaps = 23/212 (10%) Query: 3 QYHKFQRELYCDLQG-ENIEAFN-SASKTVKCLQLANGAVYYDEEKHWKEVHDE--KIKA 58 Y + ++ +++G IE K Q+ N Y +E K++ + K Sbjct: 695 LYEQLVQDTLQNVEGLSGIERRGFILLMLNKLKQICNHPALYLKETEPKDIIERSMKTST 754 Query: 59 LEVIIE--KANAAPIIVAYHFNSDLARLQKAFPQ-----------GRTLDKDPCTIQEWN 105 L +IE K ++ + L+ + + I+++ Sbjct: 755 LMELIENIKDQNESCLIFTQYIGMGNMLKDVLEKHFGQRVLFLNGSVPKKERDKMIEQFQ 814 Query: 106 EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 G + + G GLNL N ++ + WW+ Q +R + G KR V Sbjct: 815 NGTYDIFILSLKAGGTGLNLT-AANHVIHYDRWWNPAVENQATDR-----AYRIGQKRFV 868 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 V+ LI T++E + + L K ++ + ++ + Sbjct: 869 HVHKLITTGTLEEKIDEMLERKQSLNNAVITS 900 >gi|228903720|ref|ZP_04067840.1| Helicase, SNF2/RAD54 [Bacillus thuringiensis IBL 4222] gi|228855988|gb|EEN00528.1| Helicase, SNF2/RAD54 [Bacillus thuringiensis IBL 4222] Length = 856 Score = 122 bits (307), Expect = 2e-26, Method: Composition-based stats. Identities = 41/212 (19%), Positives = 80/212 (37%), Gaps = 23/212 (10%) Query: 3 QYHKFQRELYCDLQG-ENIEAFN-SASKTVKCLQLANGAVYYDEEKHWKEVHDE--KIKA 58 Y + ++ +++G IE K Q+ N Y +E+ + V + K K Sbjct: 633 LYEQLVQDTLQNVEGLSGIERRGFILLMLNKLKQICNHPALYLKEEEPQNVVERSMKTKT 692 Query: 59 LEVIIE--KANAAPIIVAYHFNSDLARLQKAFPQ-----------GRTLDKDPCTIQEWN 105 L +IE K ++ + L++ + I+E+ Sbjct: 693 LMELIENIKDQNESCLIFTQYIGMGNMLKRVLEEQFGQRVLFLNGSVPKKNRDKMIEEFQ 752 Query: 106 EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 G + + G GLNL N ++ + WW+ Q +R + G KR V Sbjct: 753 NGTYDIFILSLKAGGTGLNLT-AANHVIHYDRWWNPAVENQATDR-----AYRIGQKRFV 806 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 V+ LI T++E + + L K ++ + ++ + Sbjct: 807 HVHKLITTGTLEEKIDEMLERKQSLNNAVITS 838 >gi|52140319|ref|YP_086511.1| SNF2 family helicase [Bacillus cereus E33L] gi|51973788|gb|AAU15338.1| SNF2 family helicase [Bacillus cereus E33L] Length = 918 Score = 122 bits (307), Expect = 2e-26, Method: Composition-based stats. Identities = 39/212 (18%), Positives = 79/212 (37%), Gaps = 23/212 (10%) Query: 3 QYHKFQRELYCDLQG-ENIEAFN-SASKTVKCLQLANGAVYYDEEKHWKEVHDE--KIKA 58 Y + ++ +++G IE K Q+ N Y +E K++ + K Sbjct: 695 LYEQLVQDTLQNVEGLSGIERRGFILLMLNKLKQICNHPALYLKETEPKDIIERSMKTST 754 Query: 59 LEVIIE--KANAAPIIVAYHFNSDLARLQKAFPQ-----------GRTLDKDPCTIQEWN 105 L +IE K ++ + L+ + + I+++ Sbjct: 755 LMELIENIKDQNESCLIFTQYIGMGNMLKNVLEEHFGQRVLFLNGSVPKKERDKMIEQFQ 814 Query: 106 EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 G + + G GLNL N ++ + WW+ Q +R + G KR V Sbjct: 815 NGTYDIFILSLKAGGTGLNLT-AANHVIHYDRWWNPAVENQATDR-----AYRIGQKRFV 868 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 V+ LI T++E + + L K ++ + ++ + Sbjct: 869 HVHKLITTGTLEEKIDEMLERKQSLNNAVITS 900 >gi|47569742|ref|ZP_00240415.1| helicase, SNF2/RAD54 family [Bacillus cereus G9241] gi|47553593|gb|EAL11971.1| helicase, SNF2/RAD54 family [Bacillus cereus G9241] Length = 918 Score = 122 bits (307), Expect = 2e-26, Method: Composition-based stats. Identities = 39/212 (18%), Positives = 79/212 (37%), Gaps = 23/212 (10%) Query: 3 QYHKFQRELYCDLQG-ENIEAFN-SASKTVKCLQLANGAVYYDEEKHWKEVHDE--KIKA 58 Y + ++ +++G IE K Q+ N Y +E K++ + K Sbjct: 695 LYEQLVQDTLQNVEGLSGIERRGFILLMLNKLKQICNHPALYLKETEPKDIIERSMKTST 754 Query: 59 LEVIIE--KANAAPIIVAYHFNSDLARLQKAFPQ-----------GRTLDKDPCTIQEWN 105 L +IE K ++ + L+ + + I+++ Sbjct: 755 LMELIENIKDQNESCLIFTQYIGMGNMLKNVLEEHFGQRVLFLNGSVPKKERDKMIEQFQ 814 Query: 106 EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 G + + G GLNL N ++ + WW+ Q +R + G KR V Sbjct: 815 NGTYDIFILSLKAGGTGLNLT-AANHVIHYDRWWNPAVENQATDR-----AYRIGQKRFV 868 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 V+ LI T++E + + L K ++ + ++ + Sbjct: 869 HVHKLITTGTLEEKIDEMLERKQSLNNAVITS 900 >gi|254724328|ref|ZP_05186112.1| putative helicase [Bacillus anthracis str. A1055] Length = 918 Score = 122 bits (307), Expect = 2e-26, Method: Composition-based stats. Identities = 39/212 (18%), Positives = 79/212 (37%), Gaps = 23/212 (10%) Query: 3 QYHKFQRELYCDLQG-ENIEAFN-SASKTVKCLQLANGAVYYDEEKHWKEVHDE--KIKA 58 Y + ++ +++G IE K Q+ N Y +E K++ + K Sbjct: 695 LYEQLVQDTLQNVEGLSGIERRGFILLMLNKLKQICNHPALYLKETEPKDIIERSMKTST 754 Query: 59 LEVIIE--KANAAPIIVAYHFNSDLARLQKAFPQ-----------GRTLDKDPCTIQEWN 105 L +IE K ++ + L+ + + I+++ Sbjct: 755 LMELIENIKDQNESCLIFTQYIGMGNMLKNVLEEHFGQRVLFLNGSVPKKERDKMIEQFQ 814 Query: 106 EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 G + + G GLNL N ++ + WW+ Q +R + G KR V Sbjct: 815 NGTYDIFILSLKAGGTGLNLT-AANHVIHYDRWWNPAVENQATDR-----AYRIGQKRFV 868 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 V+ LI T++E + + L K ++ + ++ + Sbjct: 869 HVHKLITTGTLEEKIDEMLERKQSLNNAVITS 900 >gi|229130493|ref|ZP_04259449.1| Helicase, SNF2/RAD54 [Bacillus cereus BDRD-Cer4] gi|228652832|gb|EEL08714.1| Helicase, SNF2/RAD54 [Bacillus cereus BDRD-Cer4] Length = 856 Score = 122 bits (307), Expect = 3e-26, Method: Composition-based stats. Identities = 46/212 (21%), Positives = 85/212 (40%), Gaps = 23/212 (10%) Query: 3 QYHKFQRELYCDLQG-ENIEAFN-SASKTVKCLQLANGAVYYDEEKHWKEVHDE--KIKA 58 Y + ++ +++G IE K Q+ N Y +E+ + V + K K Sbjct: 633 LYEQLVQDTLQNVEGLSGIERRGFILLMLNKLKQICNHPALYLKEEEPQNVVERSMKTKT 692 Query: 59 LEVIIE--KANAAPIIVAYHFN---SDLARLQK-------AFPQGRTLDKDP-CTIQEWN 105 L +IE K ++ + + L R+ + F G KD I+E+ Sbjct: 693 LIELIENIKDQNESCLIFTQYIGMGNMLKRVLEEKFGQRVLFLNGSVPKKDRDKMIEEFQ 752 Query: 106 EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 G + + G GLNL N ++ + WW+ Q +R + G KR V Sbjct: 753 NGTYDIFILSLKAGGTGLNLT-AANHVIHYDRWWNPAVENQATDR-----AYRIGQKRFV 806 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 V+ LI T++E + + L K ++ + ++ + Sbjct: 807 HVHKLITTGTLEEKIDEMLERKQSLNNAVITS 838 >gi|196039505|ref|ZP_03106810.1| putative helicase [Bacillus cereus NVH0597-99] gi|196029665|gb|EDX68267.1| putative helicase [Bacillus cereus NVH0597-99] Length = 918 Score = 122 bits (307), Expect = 3e-26, Method: Composition-based stats. Identities = 39/212 (18%), Positives = 79/212 (37%), Gaps = 23/212 (10%) Query: 3 QYHKFQRELYCDLQG-ENIEAFN-SASKTVKCLQLANGAVYYDEEKHWKEVHDE--KIKA 58 Y + ++ +++G IE K Q+ N Y +E K++ + K Sbjct: 695 LYEQLVQDTLQNVEGLSGIERRGFILLMLNKLKQICNHPALYLKETEPKDIIERSMKTST 754 Query: 59 LEVIIE--KANAAPIIVAYHFNSDLARLQKAFPQ-----------GRTLDKDPCTIQEWN 105 L +IE K ++ + L+ + + I+++ Sbjct: 755 LMELIENIKDQNESCLIFTQYIGMGNMLKNVLEEHFGQRVLFLNGSVPKKERDKMIEQFQ 814 Query: 106 EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 G + + G GLNL N ++ + WW+ Q +R + G KR V Sbjct: 815 NGTYDIFILSLKAGGTGLNLT-AANHVIHYDRWWNPAVENQATDR-----AYRIGQKRFV 868 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 V+ LI T++E + + L K ++ + ++ + Sbjct: 869 HVHKLITTGTLEEKIDEMLERKQSLNNAVITS 900 >gi|196036261|ref|ZP_03103659.1| putative helicase [Bacillus cereus W] gi|218906422|ref|YP_002454256.1| putative helicase [Bacillus cereus AH820] gi|195991053|gb|EDX55023.1| putative helicase [Bacillus cereus W] gi|218539910|gb|ACK92308.1| putative helicase [Bacillus cereus AH820] Length = 918 Score = 122 bits (307), Expect = 3e-26, Method: Composition-based stats. Identities = 39/212 (18%), Positives = 79/212 (37%), Gaps = 23/212 (10%) Query: 3 QYHKFQRELYCDLQG-ENIEAFN-SASKTVKCLQLANGAVYYDEEKHWKEVHDE--KIKA 58 Y + ++ +++G IE K Q+ N Y +E K++ + K Sbjct: 695 LYEQLVQDTLQNVEGLSGIERRGFILLMLNKLKQICNHPALYLKETEPKDIIERSMKTST 754 Query: 59 LEVIIE--KANAAPIIVAYHFNSDLARLQKAFPQ-----------GRTLDKDPCTIQEWN 105 L +IE K ++ + L+ + + I+++ Sbjct: 755 LMELIENIKDQNESCLIFTQYIGMGNMLKNVLEEHFGQRVLFLNGSVPKKERDKMIEQFQ 814 Query: 106 EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 G + + G GLNL N ++ + WW+ Q +R + G KR V Sbjct: 815 NGTYDIFILSLKAGGTGLNLT-AANHVIHYDRWWNPAVENQATDR-----AYRIGQKRFV 868 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 V+ LI T++E + + L K ++ + ++ + Sbjct: 869 HVHKLITTGTLEEKIDEMLERKQSLNNAVITS 900 >gi|118480284|ref|YP_897435.1| SNF2 family helicase [Bacillus thuringiensis str. Al Hakam] gi|196045586|ref|ZP_03112816.1| putative helicase [Bacillus cereus 03BB108] gi|118419509|gb|ABK87928.1| SNF2 family helicase [Bacillus thuringiensis str. Al Hakam] gi|196023417|gb|EDX62094.1| putative helicase [Bacillus cereus 03BB108] Length = 918 Score = 122 bits (307), Expect = 3e-26, Method: Composition-based stats. Identities = 39/212 (18%), Positives = 79/212 (37%), Gaps = 23/212 (10%) Query: 3 QYHKFQRELYCDLQG-ENIEAFN-SASKTVKCLQLANGAVYYDEEKHWKEVHDE--KIKA 58 Y + ++ +++G IE K Q+ N Y +E K++ + K Sbjct: 695 LYEQLVQDTLQNVEGLSGIERRGFILLMLNKLKQICNHPALYLKETEPKDIIERSMKTST 754 Query: 59 LEVIIE--KANAAPIIVAYHFNSDLARLQKAFPQ-----------GRTLDKDPCTIQEWN 105 L +IE K ++ + L+ + + I+++ Sbjct: 755 LMELIENIKDQNESCLIFTQYIGMGNMLKNVLEEHFGQRVLFLNGSVPKKERDKMIEQFQ 814 Query: 106 EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 G + + G GLNL N ++ + WW+ Q +R + G KR V Sbjct: 815 NGTYDIFILSLKAGGTGLNLT-AANHVIHYDRWWNPAVENQATDR-----AYRIGQKRFV 868 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 V+ LI T++E + + L K ++ + ++ + Sbjct: 869 HVHKLITTGTLEEKIDEMLERKQSLNNAVITS 900 >gi|30265272|ref|NP_847649.1| helicase, putative [Bacillus anthracis str. Ames] gi|47530804|ref|YP_022153.1| helicase [Bacillus anthracis str. 'Ames Ancestor'] gi|49188082|ref|YP_031335.1| helicase [Bacillus anthracis str. Sterne] gi|65317216|ref|ZP_00390175.1| COG0553: Superfamily II DNA/RNA helicases, SNF2 family [Bacillus anthracis str. A2012] gi|165870042|ref|ZP_02214699.1| putative helicase [Bacillus anthracis str. A0488] gi|167636534|ref|ZP_02394830.1| putative helicase [Bacillus anthracis str. A0442] gi|167641825|ref|ZP_02400066.1| putative helicase [Bacillus anthracis str. A0193] gi|170689422|ref|ZP_02880614.1| putative helicase [Bacillus anthracis str. A0465] gi|170708948|ref|ZP_02899380.1| putative helicase [Bacillus anthracis str. A0389] gi|177654075|ref|ZP_02936085.1| putative helicase [Bacillus anthracis str. A0174] gi|190567743|ref|ZP_03020655.1| putative helicase [Bacillus anthracis Tsiankovskii-I] gi|227818007|ref|YP_002818016.1| putative helicase [Bacillus anthracis str. CDC 684] gi|229602583|ref|YP_002869461.1| putative helicase [Bacillus anthracis str. A0248] gi|254686332|ref|ZP_05150191.1| putative helicase [Bacillus anthracis str. CNEVA-9066] gi|254735172|ref|ZP_05192881.1| putative helicase [Bacillus anthracis str. Western North America USA6153] gi|254737051|ref|ZP_05194756.1| putative helicase [Bacillus anthracis str. Western North America USA6153] gi|254744378|ref|ZP_05202058.1| putative helicase [Bacillus anthracis str. Kruger B] gi|254755680|ref|ZP_05207713.1| putative helicase [Bacillus anthracis str. Vollum] gi|254759588|ref|ZP_05211613.1| putative helicase [Bacillus anthracis str. Australia 94] gi|30259950|gb|AAP29135.1| putative helicase [Bacillus anthracis str. Ames] gi|47505952|gb|AAT34628.1| putative helicase [Bacillus anthracis str. 'Ames Ancestor'] gi|49182009|gb|AAT57385.1| helicase, putative [Bacillus anthracis str. Sterne] gi|164714365|gb|EDR19885.1| putative helicase [Bacillus anthracis str. A0488] gi|167510237|gb|EDR85642.1| putative helicase [Bacillus anthracis str. A0193] gi|167528066|gb|EDR90866.1| putative helicase [Bacillus anthracis str. A0442] gi|170126113|gb|EDS95008.1| putative helicase [Bacillus anthracis str. A0389] gi|170666649|gb|EDT17420.1| putative helicase [Bacillus anthracis str. A0465] gi|172080958|gb|EDT66037.1| putative helicase [Bacillus anthracis str. A0174] gi|190561159|gb|EDV15132.1| putative helicase [Bacillus anthracis Tsiankovskii-I] gi|227003185|gb|ACP12928.1| putative helicase [Bacillus anthracis str. CDC 684] gi|229266991|gb|ACQ48628.1| putative helicase [Bacillus anthracis str. A0248] Length = 918 Score = 122 bits (307), Expect = 3e-26, Method: Composition-based stats. Identities = 39/212 (18%), Positives = 79/212 (37%), Gaps = 23/212 (10%) Query: 3 QYHKFQRELYCDLQG-ENIEAFN-SASKTVKCLQLANGAVYYDEEKHWKEVHDE--KIKA 58 Y + ++ +++G IE K Q+ N Y +E K++ + K Sbjct: 695 LYEQLVQDTLQNVEGLSGIERRGFILLMLNKLKQICNHPALYLKETEPKDIIERSMKTST 754 Query: 59 LEVIIE--KANAAPIIVAYHFNSDLARLQKAFPQ-----------GRTLDKDPCTIQEWN 105 L +IE K ++ + L+ + + I+++ Sbjct: 755 LMELIENIKDQNESCLIFTQYIGMGNMLKNVLEEHFGQRVLFLNGSVPKKERDKMIEQFQ 814 Query: 106 EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 G + + G GLNL N ++ + WW+ Q +R + G KR V Sbjct: 815 NGTYDIFILSLKAGGTGLNLT-AANHVIHYDRWWNPAVENQATDR-----AYRIGQKRFV 868 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 V+ LI T++E + + L K ++ + ++ + Sbjct: 869 HVHKLITTGTLEEKIDEMLERKQSLNNAVITS 900 >gi|308175364|ref|YP_003922069.1| ATP-binding SNF2 helicase or protein kinase [Bacillus amyloliquefaciens DSM 7] gi|307608228|emb|CBI44599.1| putative ATP-binding SNF2 helicase or protein kinase [Bacillus amyloliquefaciens DSM 7] Length = 924 Score = 122 bits (307), Expect = 3e-26, Method: Composition-based stats. Identities = 39/213 (18%), Positives = 82/213 (38%), Gaps = 25/213 (11%) Query: 3 QYHKFQRELY---CDLQGENIEAFNSASKTVKCLQLANG-AVY-YDEEKHWKEVHDEKIK 57 Y + ++ + L G +A S + Q+ + A+Y +E+ K++ Sbjct: 694 LYEQLVKDTFEHMASLTGMQRKAL-ILSMLGRLKQICDHPALYLKEEQTELLNGRSVKLE 752 Query: 58 ALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQG---------RTLDKDPCT--IQEW 104 L ++ ++ + +++ + +L K ++ + Sbjct: 753 KLLDLMAAIRGQGESCLIFTQYIQMGNMMKRLLEKTFGEPVQFLNGSLSKQERDSLVERF 812 Query: 105 NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA 164 + + P L + G GLNL N ++ + WW+ Q +R + G +R Sbjct: 813 QKKEYPTLILSLKAGGTGLNLT-AANHVIHYDRWWNPAVENQATDR-----AYRIGQERF 866 Query: 165 VFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 V V+ LI TI+E + L TK T+ D ++ + Sbjct: 867 VHVHKLITTGTIEEKIDAMLETKQTLNDQIIQS 899 >gi|308067308|ref|YP_003868913.1| Superfamily II DNA/RNA helicase, SNF2 family [Paenibacillus polymyxa E681] gi|305856587|gb|ADM68375.1| Superfamily II DNA/RNA helicase, SNF2 family [Paenibacillus polymyxa E681] Length = 1041 Score = 122 bits (307), Expect = 3e-26, Method: Composition-based stats. Identities = 37/211 (17%), Positives = 79/211 (37%), Gaps = 24/211 (11%) Query: 3 QYHKFQRELYCDLQGENIEAFNSASKT--VKCLQLAN--GAVYYDEEKHWKEVHDEKIKA 58 Y +L L G+ A + K Q+ + G + K + K++ Sbjct: 809 LYRGVVDQLLGTLDGQIGMARKGLVLSSLTKLKQICDHPGLIIPGRADSGKTENSGKMER 868 Query: 59 LEVIIE--KANAAPIIVAYHFNSDLARLQKAFPQ-----------GRTLDKDPCTIQEWN 105 L ++E + N ++ + S L + G + + + Sbjct: 869 LLELVETIRENGESALIFTQYVSMGELLVSRLAKIFGEEPYFLHGGLAKTRRDEMVHNFQ 928 Query: 106 EGKIP-LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA 164 +G+ P + + G GLNL + ++ + WW+ Q +R+ + G R Sbjct: 929 QGEGPNIFVLSLRAGGVGLNLTRASH-VIHYDRWWNPAVENQATDRVF-----RIGQSRN 982 Query: 165 VFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 V V+ LI Q T++E + + + +K + + ++ Sbjct: 983 VQVHKLICQGTLEERIDELIESKKALSEQVV 1013 >gi|182625182|ref|ZP_02952958.1| DNA/RNA helicase, SNF2 [Clostridium perfringens D str. JGS1721] gi|177909641|gb|EDT72075.1| DNA/RNA helicase, SNF2 [Clostridium perfringens D str. JGS1721] Length = 1069 Score = 122 bits (306), Expect = 3e-26, Method: Composition-based stats. Identities = 32/190 (16%), Positives = 71/190 (37%), Gaps = 22/190 (11%) Query: 21 EAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKAN--AAPIIVAYHFN 78 + N + K ++ + K+ ++ I++ A+ I++ F Sbjct: 868 DKINLFAYLTKLREICLDPSLVVPDYT---GGSSKLTVVKEIVKDASESGKKILLFSQFT 924 Query: 79 SDLARLQKAFPQ-----------GRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQY 127 S L ++++ F + D+ + + I + + G GLNL Sbjct: 925 SVLQKIEEDFKKDDISYLYLDGGTSAKDRVERVKKFNEDSNIKVFLISLKAGGVGLNLT- 983 Query: 128 GGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTK 187 ++++ F WW+ Q +R + G + V V L+A +TI+E ++ K Sbjct: 984 SASVVIHFDPWWNPAVEDQATDR-----AHRFGQENKVEVIKLVANDTIEEKIVLMQEDK 1038 Query: 188 STIQDLLLNA 197 + L++ Sbjct: 1039 RELIQSLMDG 1048 >gi|42784409|ref|NP_981656.1| helicase, putative [Bacillus cereus ATCC 10987] gi|42740341|gb|AAS44264.1| helicase, putative [Bacillus cereus ATCC 10987] Length = 918 Score = 122 bits (306), Expect = 3e-26, Method: Composition-based stats. Identities = 39/212 (18%), Positives = 79/212 (37%), Gaps = 23/212 (10%) Query: 3 QYHKFQRELYCDLQG-ENIEAFN-SASKTVKCLQLANGAVYYDEEKHWKEVHDE--KIKA 58 Y + ++ +++G IE K Q+ N Y +E K++ + K Sbjct: 695 LYEQLVQDTLQNVEGLSGIERRGFILLMLNKLKQICNHPALYLKETEPKDIIERSMKTST 754 Query: 59 LEVIIE--KANAAPIIVAYHFNSDLARLQKAFPQ-----------GRTLDKDPCTIQEWN 105 L +IE K ++ + L+ + + I+++ Sbjct: 755 LMELIENIKDQNESCLIFTQYIGMGNMLKDVLEEHFGQRVLFLNGSVPKKERDKMIEQFQ 814 Query: 106 EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 G + + G GLNL N ++ + WW+ Q +R + G KR V Sbjct: 815 NGTYDIFILSLKAGGTGLNLT-AANHVIHYDRWWNPAVENQATDR-----AYRIGQKRFV 868 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 V+ LI T++E + + L K ++ + ++ + Sbjct: 869 HVHKLITTGTLEEKIDEMLERKQSLNNAVITS 900 >gi|229141981|ref|ZP_04270506.1| Helicase, SNF2/RAD54 [Bacillus cereus BDRD-ST26] gi|228641270|gb|EEK97576.1| Helicase, SNF2/RAD54 [Bacillus cereus BDRD-ST26] Length = 855 Score = 122 bits (306), Expect = 3e-26, Method: Composition-based stats. Identities = 39/212 (18%), Positives = 79/212 (37%), Gaps = 23/212 (10%) Query: 3 QYHKFQRELYCDLQG-ENIEAFN-SASKTVKCLQLANGAVYYDEEKHWKEVHDE--KIKA 58 Y + ++ +++G IE K Q+ N Y +E K++ + K Sbjct: 632 LYEQLVQDTLQNVEGLSGIERRGFILLMLNKLKQICNHPALYLKETEPKDIIERSMKTST 691 Query: 59 LEVIIE--KANAAPIIVAYHFNSDLARLQKAFPQ-----------GRTLDKDPCTIQEWN 105 L +IE K ++ + L+ + + I+++ Sbjct: 692 LMELIENIKDQNESCLIFTQYIGMGNMLKDVLEKHFGQRVLFLNGSVPKKERDKMIEQFQ 751 Query: 106 EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 G + + G GLNL N ++ + WW+ Q +R + G KR V Sbjct: 752 NGTYDIFILSLKAGGTGLNLT-AANHVIHYDRWWNPAVENQATDR-----AYRIGQKRFV 805 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 V+ LI T++E + + L K ++ + ++ + Sbjct: 806 HVHKLITTGTLEEKIDEMLERKQSLNNAVITS 837 >gi|229199361|ref|ZP_04326026.1| Helicase, SNF2/RAD54 [Bacillus cereus m1293] gi|228584075|gb|EEK42228.1| Helicase, SNF2/RAD54 [Bacillus cereus m1293] Length = 855 Score = 122 bits (306), Expect = 3e-26, Method: Composition-based stats. Identities = 39/212 (18%), Positives = 79/212 (37%), Gaps = 23/212 (10%) Query: 3 QYHKFQRELYCDLQG-ENIEAFN-SASKTVKCLQLANGAVYYDEEKHWKEVHDE--KIKA 58 Y + ++ +++G IE K Q+ N Y +E K++ + K Sbjct: 632 LYEQLVQDTLQNVEGLSGIERRGFILLMLNKLKQICNHPALYLKETEPKDIIERSMKTST 691 Query: 59 LEVIIE--KANAAPIIVAYHFNSDLARLQKAFPQ-----------GRTLDKDPCTIQEWN 105 L +IE K ++ + L+ + + I+++ Sbjct: 692 LMELIENIKDQNESCLIFTQYIGMGNMLKDVLEKHFGQRVLFLNGSVPKKERDKMIEQFQ 751 Query: 106 EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 G + + G GLNL N ++ + WW+ Q +R + G KR V Sbjct: 752 NGTYDIFILSLKAGGTGLNLT-AANHVIHYDRWWNPAVENQATDR-----AYRIGQKRFV 805 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 V+ LI T++E + + L K ++ + ++ + Sbjct: 806 HVHKLITTGTLEEKIDEMLERKQSLNNAVITS 837 >gi|154687749|ref|YP_001422910.1| YwqA [Bacillus amyloliquefaciens FZB42] gi|154353600|gb|ABS75679.1| YwqA [Bacillus amyloliquefaciens FZB42] Length = 924 Score = 122 bits (306), Expect = 3e-26, Method: Composition-based stats. Identities = 39/213 (18%), Positives = 83/213 (38%), Gaps = 25/213 (11%) Query: 3 QYHKFQRELY---CDLQGENIEAFNSASKTVKCLQLANG-AVY-YDEEKHWKEVHDEKIK 57 Y + ++ + L G +A S + Q+ + A+Y +E+ K++ Sbjct: 694 LYEQLVKDTFEHMASLTGMQRKAL-ILSMLGRLKQICDHPALYLKEEQTELLNGRSVKLE 752 Query: 58 ALEVIIE--KANAAPIIVAYHFNSDLARLQKAFPQG---------RTLDKDPCT--IQEW 104 L ++ + ++ + +++ + +L K ++ + Sbjct: 753 KLLDLMAVIRGQGESCLIFTQYIQMGNMMKRLLEKTFGEPVQFLNGSLSKQERDSLVERF 812 Query: 105 NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA 164 + + P L + G GLNL N ++ + WW+ Q +R + G +R Sbjct: 813 QKKEYPTLILSLKAGGTGLNLT-AANHVIHYDRWWNPAVENQATDR-----AYRIGQERF 866 Query: 165 VFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 V V+ LI TI+E + L TK T+ D ++ + Sbjct: 867 VHVHKLITTGTIEEKIDAMLETKQTLNDQIIQS 899 >gi|229187464|ref|ZP_04314606.1| Helicase, SNF2/RAD54 [Bacillus cereus BGSC 6E1] gi|228595985|gb|EEK53663.1| Helicase, SNF2/RAD54 [Bacillus cereus BGSC 6E1] Length = 855 Score = 122 bits (306), Expect = 3e-26, Method: Composition-based stats. Identities = 39/212 (18%), Positives = 79/212 (37%), Gaps = 23/212 (10%) Query: 3 QYHKFQRELYCDLQG-ENIEAFN-SASKTVKCLQLANGAVYYDEEKHWKEVHDE--KIKA 58 Y + ++ +++G IE K Q+ N Y +E K++ + K Sbjct: 632 LYEQLVQDTLQNVEGLSGIERRGFILLMLNKLKQICNHPALYLKETEPKDIIERSMKTST 691 Query: 59 LEVIIE--KANAAPIIVAYHFNSDLARLQKAFPQ-----------GRTLDKDPCTIQEWN 105 L +IE K ++ + L+ + + I+++ Sbjct: 692 LMELIENIKNQNESCLIFTQYIGMGNMLKNVLEEHFGQRVLFLNGSVPKKERDKMIEQFQ 751 Query: 106 EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 G + + G GLNL N ++ + WW+ Q +R + G KR V Sbjct: 752 NGTYDIFILSLKAGGTGLNLT-AANHVIHYDRWWNPAVENQATDR-----AYRIGQKRFV 805 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 V+ LI T++E + + L K ++ + ++ + Sbjct: 806 HVHKLITTGTLEEKIDEMLERKQSLNNAVITS 837 >gi|328555338|gb|AEB25830.1| ATP-binding SNF2 helicase or protein kinase [Bacillus amyloliquefaciens TA208] gi|328913706|gb|AEB65302.1| putative ATP-binding SNF2 helicase or protein kinase [Bacillus amyloliquefaciens LL3] Length = 924 Score = 122 bits (306), Expect = 3e-26, Method: Composition-based stats. Identities = 39/213 (18%), Positives = 82/213 (38%), Gaps = 25/213 (11%) Query: 3 QYHKFQRELY---CDLQGENIEAFNSASKTVKCLQLANG-AVY-YDEEKHWKEVHDEKIK 57 Y + ++ + L G +A S + Q+ + A+Y +E+ K++ Sbjct: 694 LYEQLVKDTFEHMASLTGMQRKAL-ILSMLGRLKQICDHPALYLKEEQTELLNGRSVKLE 752 Query: 58 ALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQG---------RTLDKDPCT--IQEW 104 L ++ ++ + +++ + +L K ++ + Sbjct: 753 KLLDLMAAIRGQGESCLIFTQYIQMGNMMKRLLEKTFGEPVQFLNGSLSKQERDSLVERF 812 Query: 105 NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA 164 + + P L + G GLNL N ++ + WW+ Q +R + G +R Sbjct: 813 QKKEYPTLILSLKAGGTGLNLT-AANHVIHYDRWWNPAVENQATDR-----AYRIGQERF 866 Query: 165 VFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 V V+ LI TI+E + L TK T+ D ++ + Sbjct: 867 VHVHKLITTGTIEEKIDAMLETKQTLNDQIIQS 899 >gi|293400916|ref|ZP_06645061.1| SWF/SNF family helicase [Erysipelotrichaceae bacterium 5_2_54FAA] gi|291305942|gb|EFE47186.1| SWF/SNF family helicase [Erysipelotrichaceae bacterium 5_2_54FAA] Length = 1107 Score = 122 bits (306), Expect = 3e-26, Method: Composition-based stats. Identities = 35/197 (17%), Positives = 73/197 (37%), Gaps = 21/197 (10%) Query: 21 EAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIE--KANAAPIIVAYHFN 78 + F + + Q+ E K+ ++E + N +++ F Sbjct: 908 DKFAILAMLTRLRQICCEPRILYEN---ITTASSKLLYCLDLLETLRENHQRVLLFSSFT 964 Query: 79 SDLARLQKAFPQGR----------TLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYG 128 S L L++ + R T + +Q++ G + + G GLNL Sbjct: 965 SVLDILEEELIKRRFSYLKLTGNNTKQQRRDMVQQFQNGLTDVFLISLKAGGTGLNLT-A 1023 Query: 129 GNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKS 188 + ++ F WW++ Q +R + G + V VY LI +++I+E + + K Sbjct: 1024 ASAVIHFDPWWNVSAQNQATDR-----AYRIGQNQNVQVYKLIMKDSIEEKIQTLQKMKK 1078 Query: 189 TIQDLLLNALKKETIHV 205 + D + + H+ Sbjct: 1079 DLSDHFVEENEGSIYHM 1095 >gi|229094348|ref|ZP_04225422.1| Helicase, SNF2/RAD54 [Bacillus cereus Rock3-42] gi|228689026|gb|EEL42851.1| Helicase, SNF2/RAD54 [Bacillus cereus Rock3-42] Length = 855 Score = 122 bits (306), Expect = 3e-26, Method: Composition-based stats. Identities = 39/212 (18%), Positives = 79/212 (37%), Gaps = 23/212 (10%) Query: 3 QYHKFQRELYCDLQG-ENIEAFN-SASKTVKCLQLANGAVYYDEEKHWKEVHDE--KIKA 58 Y + ++ +++G IE K Q+ N Y +E K++ + K Sbjct: 632 LYEQLVQDTLQNVEGLSGIERRGFILLMLNKLKQICNHPALYLKETEPKDIIERSMKTST 691 Query: 59 LEVIIE--KANAAPIIVAYHFNSDLARLQKAFPQ-----------GRTLDKDPCTIQEWN 105 L +IE K ++ + L+ + + I+++ Sbjct: 692 LMELIENIKDQNESCLIFTQYIGMGNMLKNVLEEHFGQRVLFLNGSVPKKERDKMIEQFQ 751 Query: 106 EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 G + + G GLNL N ++ + WW+ Q +R + G KR V Sbjct: 752 NGTYDIFILSLKAGGTGLNLT-AANHVIHYDRWWNPAVENQATDR-----AYRIGQKRFV 805 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 V+ LI T++E + + L K ++ + ++ + Sbjct: 806 HVHKLITTGTLEEKIDEMLERKQSLNNAVITS 837 >gi|228936530|ref|ZP_04099326.1| Helicase, SNF2/RAD54 [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1] gi|228823118|gb|EEM68954.1| Helicase, SNF2/RAD54 [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1] Length = 855 Score = 122 bits (306), Expect = 3e-26, Method: Composition-based stats. Identities = 39/212 (18%), Positives = 79/212 (37%), Gaps = 23/212 (10%) Query: 3 QYHKFQRELYCDLQG-ENIEAFN-SASKTVKCLQLANGAVYYDEEKHWKEVHDE--KIKA 58 Y + ++ +++G IE K Q+ N Y +E K++ + K Sbjct: 632 LYEQLVQDTLQNVEGLSGIERRGFILLMLNKLKQICNHPALYLKETEPKDIIERSMKTST 691 Query: 59 LEVIIE--KANAAPIIVAYHFNSDLARLQKAFPQ-----------GRTLDKDPCTIQEWN 105 L +IE K ++ + L+ + + I+++ Sbjct: 692 LMELIENIKDQNESCLIFTQYIGMGNMLKNVLEEHFGQRVLFLNGSVPKKERDKMIEQFQ 751 Query: 106 EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 G + + G GLNL N ++ + WW+ Q +R + G KR V Sbjct: 752 NGTYDIFILSLKAGGTGLNLT-AANHVIHYDRWWNPAVENQATDR-----AYRIGQKRFV 805 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 V+ LI T++E + + L K ++ + ++ + Sbjct: 806 HVHKLITTGTLEEKIDEMLERKQSLNNAVITS 837 >gi|229158809|ref|ZP_04286867.1| Helicase, SNF2/RAD54 [Bacillus cereus ATCC 4342] gi|228624793|gb|EEK81562.1| Helicase, SNF2/RAD54 [Bacillus cereus ATCC 4342] Length = 855 Score = 122 bits (306), Expect = 3e-26, Method: Composition-based stats. Identities = 39/212 (18%), Positives = 79/212 (37%), Gaps = 23/212 (10%) Query: 3 QYHKFQRELYCDLQG-ENIEAFN-SASKTVKCLQLANGAVYYDEEKHWKEVHDE--KIKA 58 Y + ++ +++G IE K Q+ N Y +E K++ + K Sbjct: 632 LYEQLVQDTLQNVEGLSGIERRGFILLMLNKLKQICNHPALYLKETEPKDIIERSMKTST 691 Query: 59 LEVIIE--KANAAPIIVAYHFNSDLARLQKAFPQ-----------GRTLDKDPCTIQEWN 105 L +IE K ++ + L+ + + I+++ Sbjct: 692 LMELIENIKDQNESCLIFTQYIGMGNMLKNVLEEHFGQRVLFLNGSVPKKERDKMIEQFQ 751 Query: 106 EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 G + + G GLNL N ++ + WW+ Q +R + G KR V Sbjct: 752 NGTYDIFILSLKAGGTGLNLT-AANHVIHYDRWWNPAVENQATDR-----AYRIGQKRFV 805 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 V+ LI T++E + + L K ++ + ++ + Sbjct: 806 HVHKLITTGTLEEKIDEMLERKQSLNNAVITS 837 >gi|228917853|ref|ZP_04081390.1| Helicase, SNF2/RAD54 [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] gi|228841789|gb|EEM86899.1| Helicase, SNF2/RAD54 [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] Length = 855 Score = 122 bits (306), Expect = 3e-26, Method: Composition-based stats. Identities = 39/212 (18%), Positives = 79/212 (37%), Gaps = 23/212 (10%) Query: 3 QYHKFQRELYCDLQG-ENIEAFN-SASKTVKCLQLANGAVYYDEEKHWKEVHDE--KIKA 58 Y + ++ +++G IE K Q+ N Y +E K++ + K Sbjct: 632 LYEQLVQDTLQNVEGLSGIERRGFILLMLNKLKQICNHPALYLKETEPKDIIERSMKTST 691 Query: 59 LEVIIE--KANAAPIIVAYHFNSDLARLQKAFPQ-----------GRTLDKDPCTIQEWN 105 L +IE K ++ + L+ + + I+++ Sbjct: 692 LMELIENIKDQNESCLIFTQYIGMGNMLKNVLEEHFGQRVLFLNGSVPKKERDKMIEQFQ 751 Query: 106 EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 G + + G GLNL N ++ + WW+ Q +R + G KR V Sbjct: 752 NGTYDIFILSLKAGGTGLNLT-AANHVIHYDRWWNPAVENQATDR-----AYRIGQKRFV 805 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 V+ LI T++E + + L K ++ + ++ + Sbjct: 806 HVHKLITTGTLEEKIDEMLERKQSLNNAVITS 837 >gi|149919778|ref|ZP_01908255.1| SNF2/helicase domain protein [Plesiocystis pacifica SIR-1] gi|149819385|gb|EDM78816.1| SNF2/helicase domain protein [Plesiocystis pacifica SIR-1] Length = 1047 Score = 122 bits (306), Expect = 3e-26, Method: Composition-based stats. Identities = 35/219 (15%), Positives = 82/219 (37%), Gaps = 26/219 (11%) Query: 1 MKQYHKF----QRELYCDLQGENIEAF--NSASKTVKCLQLANGAVYYDEEKHWKEVHDE 54 + Y++ + E+ + IE + + Q+ + + Sbjct: 810 LALYNRILKAAKSEITTRVGEVGIEKSQMTILAALTRLRQVCTDPKLLNLPEGTTVPKST 869 Query: 55 KIKALEVIIEKA--NAAPIIVAYHFNSDLA---------RLQKAFPQGRTLDKDPCTIQE 103 K++A +I +A + +V F S + + G T ++D + Sbjct: 870 KLEAFRALIGEAVGSGRKALVFSQFVSMQKILAGTLEELEIDYLWLHGGTTNRDELVQRF 929 Query: 104 WNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKR 163 + P+ + G GL L + ++ + WW+ Q +R + G ++ Sbjct: 930 QQKSGPPVFLISLKAGGAGLTLTE-ADTVIHYDPWWNPAVEDQATDR-----AHRIGQEK 983 Query: 164 AVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKET 202 V VY L+ ++T+++ +++ K I + +AL ++T Sbjct: 984 PVMVYRLVVEHTVEQKMVELGAEKRKIAE---SALGRDT 1019 >gi|229124753|ref|ZP_04253933.1| Helicase, SNF2/RAD54 [Bacillus cereus 95/8201] gi|228658730|gb|EEL14390.1| Helicase, SNF2/RAD54 [Bacillus cereus 95/8201] Length = 855 Score = 122 bits (306), Expect = 3e-26, Method: Composition-based stats. Identities = 39/212 (18%), Positives = 79/212 (37%), Gaps = 23/212 (10%) Query: 3 QYHKFQRELYCDLQG-ENIEAFN-SASKTVKCLQLANGAVYYDEEKHWKEVHDE--KIKA 58 Y + ++ +++G IE K Q+ N Y +E K++ + K Sbjct: 632 LYEQLVQDTLQNVEGLSGIERRGFILLMLNKLKQICNHPALYLKETEPKDIIERSMKTST 691 Query: 59 LEVIIE--KANAAPIIVAYHFNSDLARLQKAFPQ-----------GRTLDKDPCTIQEWN 105 L +IE K ++ + L+ + + I+++ Sbjct: 692 LMELIENIKDQNESCLIFTQYIGMGNMLKNVLEEHFGQRVLFLNGSVPKKERDKMIEQFQ 751 Query: 106 EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 G + + G GLNL N ++ + WW+ Q +R + G KR V Sbjct: 752 NGTYDIFILSLKAGGTGLNLT-AANHVIHYDRWWNPAVENQATDR-----AYRIGQKRFV 805 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 V+ LI T++E + + L K ++ + ++ + Sbjct: 806 HVHKLITTGTLEEKIDEMLERKQSLNNAVITS 837 >gi|24648168|ref|NP_732413.1| Ino80 [Drosophila melanogaster] gi|75026769|sp|Q9VDY1|INO80_DROME RecName: Full=Putative DNA helicase Ino80; Short=dINO80 gi|23171713|gb|AAF55658.2| Ino80 [Drosophila melanogaster] Length = 1638 Score = 122 bits (306), Expect = 3e-26, Method: Composition-based stats. Identities = 35/176 (19%), Positives = 72/176 (40%), Gaps = 21/176 (11%) Query: 44 EEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAF----------PQG 91 +K K+ L+ ++ + AN +++ + L++ Sbjct: 1146 PDKETLITDAGKLFVLDNLLTRLKANGHRVLIYSQMTKMIDLLEEYMWHRKHRYMRLDGS 1205 Query: 92 RTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 + + ++ I + + G G+NL + ++F+ W+ QQ ++R Sbjct: 1206 SKISARRDMVADFQTRADIFVFLLSTRAGGLGINLT-AADTVIFYDSDWNPTVDQQAMDR 1264 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA--LKKETIH 204 + G + V VY LI + TI+E +LQR R KS IQ ++++ K +T+ Sbjct: 1265 -----AHRLGQTKQVTVYRLICKGTIEERILQRAREKSEIQRMVISGGNFKPDTLK 1315 >gi|229175913|ref|ZP_04303410.1| Helicase, SNF2/RAD54 [Bacillus cereus MM3] gi|228607507|gb|EEK64832.1| Helicase, SNF2/RAD54 [Bacillus cereus MM3] Length = 855 Score = 122 bits (306), Expect = 3e-26, Method: Composition-based stats. Identities = 39/210 (18%), Positives = 78/210 (37%), Gaps = 23/210 (10%) Query: 3 QYHKFQRELYCDLQG-ENIEAFN-SASKTVKCLQLANGAVYYDEEKHWKEVHDE--KIKA 58 Y + ++ +++G IE K Q+ N Y +E K++ + K Sbjct: 632 LYEQLVQDTLQNVEGLSGIERRGFILLMLNKLKQICNHPALYLKETEPKDIIERSMKTST 691 Query: 59 LEVIIE--KANAAPIIVAYHFNSDLARLQKAFPQ-----------GRTLDKDPCTIQEWN 105 L +IE K ++ + L+ + + I+++ Sbjct: 692 LMELIENIKDQNESCLIFTQYIGMGNMLKNVLEEHFGQRVLFLNGSVPKKERDKMIEQFQ 751 Query: 106 EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 G + + G GLNL N ++ + WW+ Q +R + G KR V Sbjct: 752 NGTYDIFILSLKAGGTGLNLT-AANHVIHYDRWWNPAVENQATDR-----AYRIGQKRFV 805 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 V+ LI T++E + + L K ++ + ++ Sbjct: 806 HVHKLITTGTLEEKIDEMLERKQSLNNAVI 835 >gi|17862908|gb|AAL39931.1| SD02886p [Drosophila melanogaster] Length = 1638 Score = 122 bits (306), Expect = 3e-26, Method: Composition-based stats. Identities = 35/176 (19%), Positives = 72/176 (40%), Gaps = 21/176 (11%) Query: 44 EEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAF----------PQG 91 +K K+ L+ ++ + AN +++ + L++ Sbjct: 1146 PDKETLITDAGKLFVLDNLLTRLKANGHRVLIYSQMTKMIDLLEEYMWHRKHRYMRLDGS 1205 Query: 92 RTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 + + ++ I + + G G+NL + ++F+ W+ QQ ++R Sbjct: 1206 SKISARRDMVADFQTRADIFVFLLSTRAGGLGINLT-AADTVIFYDSDWNPTVDQQAMDR 1264 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA--LKKETIH 204 + G + V VY LI + TI+E +LQR R KS IQ ++++ K +T+ Sbjct: 1265 -----AHRLGQTKQVTVYRLICKGTIEERILQRAREKSEIQRMVISGGNFKPDTLK 1315 >gi|109898913|ref|YP_662168.1| SNF2-related [Pseudoalteromonas atlantica T6c] gi|109701194|gb|ABG41114.1| SNF2-related protein [Pseudoalteromonas atlantica T6c] Length = 1437 Score = 122 bits (306), Expect = 3e-26, Method: Composition-based stats. Identities = 38/219 (17%), Positives = 73/219 (33%), Gaps = 31/219 (14%) Query: 8 QRELYCDLQGENIEAFNS--------------ASKTVKCLQLANGAVYYDEEKHWKEVHD 53 +R+ Y L+ I+ + ++ VK Q + Sbjct: 1211 ERDFYEALRLNAIDNISQSGQQANAGEQRIRMLAELVKLRQACCNPKLV-MAETTIPSAK 1269 Query: 54 EKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFP---------QGRTLDKDPCT-IQE 103 + K N ++ F L +++ G T K + Sbjct: 1270 LAALDELLEELKLNNHKALIFSQFVGHLQLIKQHIEAKGFSYQYLDGSTPQKQRQASVNA 1329 Query: 104 WNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKR 163 + G+ + + G GLNL + ++ WW+ +Q +R + G R Sbjct: 1330 FQRGEGDIFLISLKAGGSGLNLT-AADYVIHMDPWWNPAVEEQASDR-----AHRIGQLR 1383 Query: 164 AVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKET 202 V +Y L+ +NTI+E ++ + K + D LL + T Sbjct: 1384 PVTIYRLVTRNTIEEKIVSLHQHKRDLADTLLEGNEAAT 1422 >gi|228930248|ref|ZP_04093256.1| Helicase, SNF2/RAD54 [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] gi|228829389|gb|EEM75018.1| Helicase, SNF2/RAD54 [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] Length = 855 Score = 122 bits (306), Expect = 4e-26, Method: Composition-based stats. Identities = 39/212 (18%), Positives = 79/212 (37%), Gaps = 23/212 (10%) Query: 3 QYHKFQRELYCDLQG-ENIEAFN-SASKTVKCLQLANGAVYYDEEKHWKEVHDE--KIKA 58 Y + ++ +++G IE K Q+ N Y +E K++ + K Sbjct: 632 LYEQLVQDTLQNVEGLSGIERRGFILLMLNKLKQICNHPALYLKETEPKDIIERSMKTST 691 Query: 59 LEVIIE--KANAAPIIVAYHFNSDLARLQKAFPQ-----------GRTLDKDPCTIQEWN 105 L +IE K ++ + L+ + + I+++ Sbjct: 692 LMELIENIKDQNESCLIFTQYIGMGNMLKNVLEEHFGQRVLFLNGSVPKKERDKMIEQFQ 751 Query: 106 EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 G + + G GLNL N ++ + WW+ Q +R + G KR V Sbjct: 752 NGTYDIFILSLKAGGTGLNLT-AANHVIHYDRWWNPAVENQATDR-----AYRIGQKRFV 805 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 V+ LI T++E + + L K ++ + ++ + Sbjct: 806 HVHKLITTGTLEEKIDEMLERKQSLNNAVITS 837 >gi|228948966|ref|ZP_04111239.1| Helicase, SNF2/RAD54 [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] gi|228810722|gb|EEM57070.1| Helicase, SNF2/RAD54 [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] Length = 855 Score = 122 bits (306), Expect = 4e-26, Method: Composition-based stats. Identities = 39/212 (18%), Positives = 79/212 (37%), Gaps = 23/212 (10%) Query: 3 QYHKFQRELYCDLQG-ENIEAFN-SASKTVKCLQLANGAVYYDEEKHWKEVHDE--KIKA 58 Y + ++ +++G IE K Q+ N Y +E K++ + K Sbjct: 632 LYEQLVQDTLQNVEGLSGIERRGFILLMLNKLKQICNHPALYLKETEPKDIIERSMKTST 691 Query: 59 LEVIIE--KANAAPIIVAYHFNSDLARLQKAFPQ-----------GRTLDKDPCTIQEWN 105 L +IE K ++ + L+ + + I+++ Sbjct: 692 LMELIENIKDQNESCLIFTQYIGMGNMLKNVLEEHFGQRVLFLNGSVPKKERDKMIEQFQ 751 Query: 106 EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 G + + G GLNL N ++ + WW+ Q +R + G KR V Sbjct: 752 NGTYDIFILSLKAGGTGLNLT-AANHVIHYDRWWNPAVENQATDR-----AYRIGQKRFV 805 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 V+ LI T++E + + L K ++ + ++ + Sbjct: 806 HVHKLITTGTLEEKIDEMLERKQSLNNAVITS 837 >gi|255530347|ref|YP_003090719.1| SNF2-like protein [Pedobacter heparinus DSM 2366] gi|255343331|gb|ACU02657.1| SNF2-related protein [Pedobacter heparinus DSM 2366] Length = 1130 Score = 122 bits (306), Expect = 4e-26, Method: Composition-based stats. Identities = 39/207 (18%), Positives = 79/207 (38%), Gaps = 20/207 (9%) Query: 3 QYHKFQRELYCDLQGENIEAFNSASKT-----VKCLQLANGAVYYDEEKHWKEVHDEKIK 57 Y +++ ++G+ + +S + Q+ N A ++K + + Sbjct: 910 VYEAAVQDIKEYIEGKAEDELAKSSMYVLQGITRLRQICNSATLLKDDKFYGNASSKMEV 969 Query: 58 ALEVIIEKANAAPIIVAYHFNSDLARLQ---------KAFPQGRTLDKDPCTIQEWNEGK 108 LE I K+ I+V F L ++ + G+T ++ + + Sbjct: 970 LLEQIESKSPNHKILVFSQFVGMLDLIRAQLGERGIAHEYLTGQTRNRQQVVNSFQDNPE 1029 Query: 109 IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVY 168 I + + G GLNL + + WW+ Q I+R + G ++ V Sbjct: 1030 IRVFLISLKAGGVGLNLTR-ADYVYLVDPWWNPAVENQAIDR-----TYRIGQEKNVVAV 1083 Query: 169 YLIAQNTIDELVLQRLRTKSTIQDLLL 195 LI +TI+E +++ TK + D L+ Sbjct: 1084 RLICPDTIEEKIMKLQNTKRDLVDDLI 1110 >gi|288553478|ref|YP_003425413.1| SNF2 helicase [Bacillus pseudofirmus OF4] gi|288544638|gb|ADC48521.1| SNF2 helicase [Bacillus pseudofirmus OF4] Length = 998 Score = 121 bits (305), Expect = 4e-26, Method: Composition-based stats. Identities = 33/191 (17%), Positives = 71/191 (37%), Gaps = 20/191 (10%) Query: 29 TVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAA--PIIVAYHFNSD----LA 82 K Q+ N + + K L +IE + +++ + Sbjct: 795 LTKLKQICNHPAQFLKTDEVSRHDSRKWDELFALIEDIHNRNEKVLIFSQYKEMGRLIAE 854 Query: 83 RLQKAFPQGR-------TLDKDPCTIQEWNE-GKIPLLFAHPASCGHGLNLQYGGNILVF 134 L++ + + T K I+ + E ++ + G GLNL N ++ Sbjct: 855 ELERRYQKDVPFLHGSLTRPKRQEAIERFQEDPEVTAFVLSLKAGGVGLNLT-AANHVIH 913 Query: 135 FSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 + WW+ Q +R + G + V V+ L+ T++E + + L K ++ D + Sbjct: 914 YDRWWNPAVENQATDR-----AFRIGQTKDVTVHKLMTSGTLEERIDKMLTQKQSLADQV 968 Query: 195 LNALKKETIHV 205 L A +++ + Sbjct: 969 LQAGEQQVTEL 979 >gi|15896682|ref|NP_350031.1| DNA/RNA helicase, SNF2 [Clostridium acetobutylicum ATCC 824] gi|15026531|gb|AAK81371.1|AE007841_6 DNA/RNA helicase, SNF2 [Clostridium acetobutylicum ATCC 824] Length = 949 Score = 121 bits (305), Expect = 4e-26, Method: Composition-based stats. Identities = 38/206 (18%), Positives = 77/206 (37%), Gaps = 21/206 (10%) Query: 3 QYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVI 62 Y ++ + + ++ S + Q+ E+ + K+K I Sbjct: 731 VYAEYIKSVKAMMKNHKDGRVQIFSYLTRLRQICLDPSLILEDYN---GGSGKLKTALEI 787 Query: 63 IEKANAAPIIVAYHFNSDLARLQKAFPQ---------GRTLDKDP-CTIQEWNEGK-IPL 111 I +++ F S L ++++ + G T +D + ++N I + Sbjct: 788 IRGHEGK-VLLFSQFTSALYKIEECLRKEKIKFFHLDGSTKPQDRINMVNDFNSNNAIKV 846 Query: 112 LFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLI 171 + G GLNL N+++ F WW+ Q +R + G K V V L+ Sbjct: 847 FLISLKAGGTGLNLT-SANLVIHFDPWWNPAVENQATDR-----AHRIGQKNVVEVIKLV 900 Query: 172 AQNTIDELVLQRLRTKSTIQDLLLNA 197 A+ TI+E ++ K + D ++ Sbjct: 901 AKGTIEEKIILLQEDKKELIDNVITG 926 >gi|328786874|ref|XP_393832.4| PREDICTED: putative DNA helicase Ino80-like [Apis mellifera] Length = 1636 Score = 121 bits (305), Expect = 4e-26, Method: Composition-based stats. Identities = 37/179 (20%), Positives = 70/179 (39%), Gaps = 27/179 (15%) Query: 44 EEKHWKEVHDEKIKALEVIIEKA--NAAPIIVA--------------YHFNSDLARLQKA 87 +K K+ L+ ++ + +++ YH RL + Sbjct: 1089 PDKQTLVTDAGKLSVLDSLLRRLKEQGHRVLIYSQMTKMIDLLEEYMYHKKHTFMRLDGS 1148 Query: 88 FPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQM 147 + D+ I + + G G+NL + ++F+ W+ QQ Sbjct: 1149 ---SKISDRRDMVADFQKRADIFVFLLSTRAGGLGINLT-AADTVIFYDSDWNPTVDQQA 1204 Query: 148 IERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA--LKKETIH 204 ++R + G + V VY LI + TI+E +LQR R KS IQ ++++ K +T+ Sbjct: 1205 MDR-----AHRLGQTKQVTVYRLICKGTIEERILQRAREKSEIQRMVISGGNFKPDTLK 1258 >gi|254393510|ref|ZP_05008646.1| SNF2/RAD54 family helicase [Streptomyces clavuligerus ATCC 27064] gi|197707133|gb|EDY52945.1| SNF2/RAD54 family helicase [Streptomyces clavuligerus ATCC 27064] Length = 480 Score = 121 bits (305), Expect = 4e-26, Method: Composition-based stats. Identities = 38/212 (17%), Positives = 72/212 (33%), Gaps = 22/212 (10%) Query: 3 QYHKFQRELYCDLQGENIEAFNSASK--TVKCLQLANG-AVYYDEEKHWK-EVHDEKIKA 58 Y RE +Q A Q+ N A Y E + K+ Sbjct: 253 LYETVVRETMVQIQAAEGIARRGLVLKLLTSLRQICNHPAQYLKETASPRLAGRSGKLDL 312 Query: 59 LEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQ----------GRTLDKDPCTIQEWNE 106 + ++ A ++V + + Q G + P + + Sbjct: 313 FDDLLGVMLAEQQSVLVFTQYVEMAHLVSARLEQQNVNHRLLHGGTPVAARPALVDAFQR 372 Query: 107 GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVF 166 G P+ + G GL L + ++F WW+ Q +R + G + V Sbjct: 373 GDFPVFLLSLRAAGTGLTLTRAQH-VIFLDQWWNPAVMDQAADR-----AYRIGTRHPVQ 426 Query: 167 VYYLIAQNTIDELVLQRLRTKSTIQDLLLNAL 198 V+ LI++ T++E + + L K + D +L+ + Sbjct: 427 VHTLISEGTVEERIAELLAAKKDLADTVLSDV 458 >gi|254444760|ref|ZP_05058236.1| SNF2 family N-terminal domain protein [Verrucomicrobiae bacterium DG1235] gi|198259068|gb|EDY83376.1| SNF2 family N-terminal domain protein [Verrucomicrobiae bacterium DG1235] Length = 831 Score = 121 bits (305), Expect = 4e-26, Method: Composition-based stats. Identities = 42/216 (19%), Positives = 83/216 (38%), Gaps = 23/216 (10%) Query: 2 KQYHKFQRELYCDLQGENIEA-----FNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKI 56 ++Y + E + A F + S + Q++ + E + + Sbjct: 600 REYKRICEEGLARFGDDLGSALRTNRFATLSLLTRLRQVSCDPNLLPWMESSIEDSGKLM 659 Query: 57 KALEVIIEKAN-AAPIIVAYHFNSDLAR----LQKAFPQ-------GRTLDKDPCTIQEW 104 LE +IE +++ F L R ++++FP+ G T D++ + Sbjct: 660 VLLEKLIEVLGTGHKVVIFSQFVRFLKRARIMVEESFPELPIFELTGSTHDREAPVREFQ 719 Query: 105 NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA 164 N + + + G+ L + + + WW+ Q I+R+ + G Sbjct: 720 NTDQTAAMLVSLKAASVGITL-HTADYVFLLDPWWNPAVESQAIDRV-----HRIGQTNN 773 Query: 165 VFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKK 200 VFVY L+AQ TI+E + + K + D ++N K Sbjct: 774 VFVYRLLAQGTIEEKIHHLQKEKRDLFDSIVNDSKA 809 >gi|156538236|ref|XP_001602268.1| PREDICTED: similar to helicase [Nasonia vitripennis] Length = 1536 Score = 121 bits (305), Expect = 4e-26, Method: Composition-based stats. Identities = 35/191 (18%), Positives = 74/191 (38%), Gaps = 21/191 (10%) Query: 29 TVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQK 86 C L + +K K+ L+ ++ + +++ + L++ Sbjct: 1033 LAACRPLNGWSNITVPDKQTLVTDAGKLSVLDNLLRRLKEQGHRVLIYSQMTKMIDLLEE 1092 Query: 87 AF----------PQGRTLDKDPCTIQEWNE-GKIPLLFAHPASCGHGLNLQYGGNILVFF 135 + + ++ + I + + G G+NL + ++F+ Sbjct: 1093 YMYHRKHTFMRLDGSSKISDRRDMVADFQKRADIFVFLLSTRAGGLGINLT-AADTVIFY 1151 Query: 136 SLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 W+ QQ ++R + G + V VY LI + TI+E +LQR R KS IQ +++ Sbjct: 1152 DSDWNPTVDQQAMDR-----AHRLGQTKQVTVYRLICKGTIEERILQRAREKSEIQRMVI 1206 Query: 196 NA--LKKETIH 204 + K +T+ Sbjct: 1207 SGGNFKPDTLK 1217 >gi|225867923|ref|YP_002743871.1| helicase [Streptococcus equi subsp. zooepidemicus] gi|225701199|emb|CAW98123.1| putative helicase [Streptococcus equi subsp. zooepidemicus] Length = 1034 Score = 121 bits (305), Expect = 4e-26, Method: Composition-based stats. Identities = 38/210 (18%), Positives = 74/210 (35%), Gaps = 23/210 (10%) Query: 1 MKQYHKFQRELYCDLQGE-NIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKAL 59 + Q + Q L + + S + Q+ + + + + K+ L Sbjct: 815 LAQLRQMQERLSAATDDDIHRSKLEILSGITRLRQICDTPSLFMD----YQGGSGKLDNL 870 Query: 60 EVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQ----------GRTLDKDPCTIQEWNEG 107 ++ + N ++ F LA +++ Q + + +N G Sbjct: 871 RTLLLQIKENGHRTLLFSQFKGMLALVKQEMDQLGLSSYTITGSTPANDRQEMTRAFNNG 930 Query: 108 KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFV 167 + G GLNL G + ++ LWW+ Q I R + G + V V Sbjct: 931 SKDAFLISLKAGGVGLNLT-GADTVILIDLWWNPAVEMQAISR-----AHRIGQEDNVEV 984 Query: 168 YYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 Y LI + TI+E +L+ K + +L+ Sbjct: 985 YRLITRGTIEEKMLELQENKRHLITTVLDG 1014 >gi|290579916|ref|YP_003484308.1| putative SNF helicase [Streptococcus mutans NN2025] gi|254996815|dbj|BAH87416.1| putative SNF helicase [Streptococcus mutans NN2025] Length = 1030 Score = 121 bits (305), Expect = 4e-26, Method: Composition-based stats. Identities = 33/159 (20%), Positives = 58/159 (36%), Gaps = 18/159 (11%) Query: 51 VHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFP----------QGRTLDKDP 98 K+ +L ++ + N ++ F L +K ++ Sbjct: 858 DDSGKLASLRELLLQIKENGHRALIFSQFRDMLDLAEKEIEALGLTSYKMTGSTPANERQ 917 Query: 99 CTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQ 158 +N G + G GLNL G + +V LWW+ Q I R + Sbjct: 918 EMTHAFNNGSKDTFLISLKAGGVGLNLT-GADTVVLIDLWWNPAIEMQAISR-----AHR 971 Query: 159 AGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 G K V VY +I + TI+E +L+ +K + +L+ Sbjct: 972 IGQKENVEVYRMITRGTIEEKILELQESKKNLVTTVLDG 1010 >gi|149924028|ref|ZP_01912411.1| SNF2/helicase domain protein [Plesiocystis pacifica SIR-1] gi|149815111|gb|EDM74664.1| SNF2/helicase domain protein [Plesiocystis pacifica SIR-1] Length = 1158 Score = 121 bits (305), Expect = 4e-26, Method: Composition-based stats. Identities = 37/209 (17%), Positives = 73/209 (34%), Gaps = 25/209 (11%) Query: 15 LQGENIEAFNSASK-----TVKCLQLANG-AVYYDEEKHWKEVHDEKIKALEVIIEKA-- 66 L + A+ + Q A+ E KI+ L +++ +A Sbjct: 883 LGAVDDRGVRGATLHILEALTRLRQACCHPALLPFPEAQAMVARSAKIELLVLLLREAIA 942 Query: 67 NAAPIIVAYHFNSDLARLQKAFPQ---------GRTLDKDPCTIQEWNEGK-IPLLFAHP 116 +V + S L + A + G T D+ + W + P+ Sbjct: 943 GGHRSLVFSQWPSFLDHVSAALDEQTVAHLRLDGSTRDR-GAVLDRWQDPAGPPVFLIST 1001 Query: 117 ASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTI 176 + G GL+L + + WW+ Q +R + G R V VY L+A +T+ Sbjct: 1002 KAGGVGLDLT-AADHVFHLDPWWNPAAEDQATDR-----AHRIGQDRPVMVYKLVAADTV 1055 Query: 177 DELVLQRLRTKSTIQDLLLNALKKETIHV 205 ++ +L+ K + ++ + E + Sbjct: 1056 EDKILELQARKRKLFQATVDTDRLEVAEL 1084 >gi|115375420|ref|ZP_01462681.1| SWI/SNF family helicase [Stigmatella aurantiaca DW4/3-1] gi|310821127|ref|YP_003953485.1| snf2/helicase domain-containing protein [Stigmatella aurantiaca DW4/3-1] gi|115367547|gb|EAU66521.1| SWI/SNF family helicase [Stigmatella aurantiaca DW4/3-1] gi|309394199|gb|ADO71658.1| SNF2/helicase domain protein [Stigmatella aurantiaca DW4/3-1] Length = 982 Score = 121 bits (305), Expect = 4e-26, Method: Composition-based stats. Identities = 38/199 (19%), Positives = 69/199 (34%), Gaps = 20/199 (10%) Query: 9 RELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKA-- 66 R L E + ++ Q A + + K++ L + A Sbjct: 775 RAEVVALLNEGGSVLKALEALLRLRQAACHSALVPGQ---HATSSSKVQTLVEALGTAVS 831 Query: 67 NAAPIIVAYHFNSDLARLQKAFP---------QGRTLDKDPCTIQEWNEGKIPLLFAHPA 117 +V + S L ++ G T D+ T + + P++ Sbjct: 832 EGHKALVFSQWTSLLDLIEPGLKGAGIAFERLDGTTADRGAVTTRFQSPEGAPVMLMSLK 891 Query: 118 SCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 + G GLNL + + WW+ Q +R + G +R V VY L++Q T++ Sbjct: 892 AGGTGLNLT-AADHVFLMDPWWNPAVEAQAADR-----AHRIGQERPVMVYRLVSQGTVE 945 Query: 178 ELVLQRLRTKSTIQDLLLN 196 E +L K I + L+ Sbjct: 946 ERILGLQEKKRAIFEAALS 964 >gi|229032866|ref|ZP_04188821.1| Helicase, SNF2/RAD54 [Bacillus cereus AH1271] gi|228728411|gb|EEL79432.1| Helicase, SNF2/RAD54 [Bacillus cereus AH1271] Length = 855 Score = 121 bits (305), Expect = 4e-26, Method: Composition-based stats. Identities = 39/210 (18%), Positives = 78/210 (37%), Gaps = 23/210 (10%) Query: 3 QYHKFQRELYCDLQG-ENIEAFN-SASKTVKCLQLANGAVYYDEEKHWKEVHDE--KIKA 58 Y + ++ +++G IE K Q+ N Y +E K++ + K Sbjct: 632 LYEQLVQDTLQNVEGLSGIERRGFILLMLNKLKQICNHPALYLKETEPKDIIERSMKTST 691 Query: 59 LEVIIE--KANAAPIIVAYHFNSDLARLQKAFPQ-----------GRTLDKDPCTIQEWN 105 L +IE K ++ + L+ + + I+++ Sbjct: 692 LMELIENIKDQNESCLIFTQYIGMGNMLKNVLEEHFGQRVLFLNGSVPKKERDKMIEQFQ 751 Query: 106 EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 G + + G GLNL N ++ + WW+ Q +R + G KR V Sbjct: 752 NGTYDIFILSLKAGGTGLNLT-AANHVIHYDRWWNPAVENQATDR-----AYRIGQKRFV 805 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 V+ LI T++E + + L K ++ + ++ Sbjct: 806 HVHKLITTGTLEEKIDEMLERKQSLNNAVI 835 >gi|310640034|ref|YP_003944792.1| snf2-like protein [Paenibacillus polymyxa SC2] gi|309244984|gb|ADO54551.1| SNF2-like protein [Paenibacillus polymyxa SC2] Length = 1041 Score = 121 bits (305), Expect = 4e-26, Method: Composition-based stats. Identities = 38/211 (18%), Positives = 79/211 (37%), Gaps = 24/211 (11%) Query: 3 QYHKFQRELYCDLQGENIEAFNSASKT--VKCLQLAN--GAVYYDEEKHWKEVHDEKIKA 58 Y +L L G+ A + K Q+ + G + K + K++ Sbjct: 809 LYRGVVDQLLGTLDGQVGMARKGLVLSSLTKLKQICDHPGLIIPGRADSSKTENSGKMER 868 Query: 59 LEVIIE--KANAAPIIVAYHFNSDLARLQKAFPQ-----------GRTLDKDPCTIQEWN 105 L ++E + N ++ + S L + G + + + Sbjct: 869 LLELVETIRENNESALIFTQYVSMGELLVSRLAKILGEEPYFLHGGLAKTRRDEMVHNFQ 928 Query: 106 EGKIP-LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA 164 +GK P + + G GLNL + ++ + WW+ Q +R+ + G R Sbjct: 929 QGKGPNIFVLSLRAGGVGLNLTRASH-VIHYDRWWNPAVENQATDRVF-----RIGQSRN 982 Query: 165 VFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 V V+ LI Q T++E + + + +K + + ++ Sbjct: 983 VQVHKLICQGTLEERIDELIESKKALSEQVV 1013 >gi|24380105|ref|NP_722060.1| putative SNF helicase [Streptococcus mutans UA159] gi|24378101|gb|AAN59366.1|AE015001_11 putative SNF helicase [Streptococcus mutans UA159] Length = 1030 Score = 121 bits (305), Expect = 4e-26, Method: Composition-based stats. Identities = 33/159 (20%), Positives = 58/159 (36%), Gaps = 18/159 (11%) Query: 51 VHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFP----------QGRTLDKDP 98 K+ +L ++ + N ++ F L +K ++ Sbjct: 858 DDSGKLASLRELLLQIKENGHRALIFSQFRDMLDLAEKEIEALGLTSYKMTGSTPANERQ 917 Query: 99 CTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQ 158 +N G + G GLNL G + +V LWW+ Q I R + Sbjct: 918 EMTHAFNNGSKDTFLISLKAGGVGLNLT-GADTVVLIDLWWNPAIEMQAISR-----AHR 971 Query: 159 AGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 G K V VY +I + TI+E +L+ +K + +L+ Sbjct: 972 IGQKENVEVYRMITRGTIEEKILELQESKKNLVTTVLDG 1010 >gi|55963369|emb|CAI11899.1| novel protein containing an SNF2 family N-terminal domain and a Helicase conserved C-terminal domain [Danio rerio] Length = 1582 Score = 121 bits (305), Expect = 4e-26, Method: Composition-based stats. Identities = 32/176 (18%), Positives = 74/176 (42%), Gaps = 21/176 (11%) Query: 44 EEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRT-------- 93 +K K+ L++++ + + +++ + L++ + Sbjct: 1122 PDKESLITDSGKLHTLDLLLTRLKSQGHRVLIYSQMTRMIDLLEEYMVYRKHTYMRLDGS 1181 Query: 94 --LDKDPCTIQEWNEG-KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 + + + ++ I + + G G+NL + ++F+ W+ QQ ++R Sbjct: 1182 SKISERRDMVADFQSRTDIFVFLLSTRAGGLGINLT-AADTVIFYDSDWNPTVDQQAMDR 1240 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA--LKKETIH 204 + G + V VY LI + TI+E +LQR + KS IQ ++++ K +T+ Sbjct: 1241 -----AHRLGQTKQVTVYRLICKGTIEERILQRAKEKSEIQRMVISGGNFKPDTLK 1291 >gi|153006894|ref|YP_001381219.1| non-specific serine/threonine protein kinase [Anaeromyxobacter sp. Fw109-5] gi|152030467|gb|ABS28235.1| Non-specific serine/threonine protein kinase [Anaeromyxobacter sp. Fw109-5] Length = 931 Score = 121 bits (305), Expect = 5e-26, Method: Composition-based stats. Identities = 35/186 (18%), Positives = 63/186 (33%), Gaps = 20/186 (10%) Query: 26 ASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIE--KANAAPIIVAYHFNSDLAR 83 + ++ Q+ N + + + K L I + + +V F Sbjct: 723 LAYLLRLKQICNHPSQWLGDGEYGPGASGKFARLAEIADTVASRQEKALVFTQFREMTEP 782 Query: 84 LQKAFPQ------------GRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNI 131 L + R D+ + + +P L + G GLNL + Sbjct: 783 LARFLAGPFGRPGLVLHGHTRVKDRAALVRRFQEDETLPFLVLSLKAGGTGLNLT-AASH 841 Query: 132 LVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQ 191 +V F WW+ Q +R + G KR V V+ L+ + T++E + L K + Sbjct: 842 VVHFDRWWNPAVENQATDR-----AFRIGQKRPVLVHKLVCRGTVEERIDSMLEDKRRLS 896 Query: 192 DLLLNA 197 LL Sbjct: 897 QELLEG 902 >gi|325510846|gb|ADZ22482.1| NA/RNA helicase, SNF2 [Clostridium acetobutylicum EA 2018] Length = 966 Score = 121 bits (305), Expect = 5e-26, Method: Composition-based stats. Identities = 38/206 (18%), Positives = 77/206 (37%), Gaps = 21/206 (10%) Query: 3 QYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVI 62 Y ++ + + ++ S + Q+ E+ + K+K I Sbjct: 748 VYAEYIKSVKAMMKNHKDGRVQIFSYLTRLRQICLDPSLILEDYN---GGSGKLKTALEI 804 Query: 63 IEKANAAPIIVAYHFNSDLARLQKAFPQ---------GRTLDKDP-CTIQEWNEGK-IPL 111 I +++ F S L ++++ + G T +D + ++N I + Sbjct: 805 IRGHEGK-VLLFSQFTSALYKIEECLRKEKIKFFHLDGSTKPQDRINMVNDFNSNNAIKV 863 Query: 112 LFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLI 171 + G GLNL N+++ F WW+ Q +R + G K V V L+ Sbjct: 864 FLISLKAGGTGLNLT-SANLVIHFDPWWNPAVENQATDR-----AHRIGQKNVVEVIKLV 917 Query: 172 AQNTIDELVLQRLRTKSTIQDLLLNA 197 A+ TI+E ++ K + D ++ Sbjct: 918 AKGTIEEKIILLQEDKKELIDNVITG 943 >gi|296436088|gb|ADH18262.1| putative helicase (SWF/SNF family) protein [Chlamydia trachomatis G/9768] gi|296437949|gb|ADH20110.1| putative helicase (SWF/SNF family) protein [Chlamydia trachomatis G/11074] gi|297140449|gb|ADH97207.1| putative helicase (SWF/SNF family) protein [Chlamydia trachomatis G/9301] Length = 1199 Score = 121 bits (305), Expect = 5e-26, Method: Composition-based stats. Identities = 38/217 (17%), Positives = 90/217 (41%), Gaps = 24/217 (11%) Query: 7 FQRELYC--DLQGENIEAF----NSASKTVKCLQLANG-AVYYDEEKHWKEVHDEKIKAL 59 ++E L+ E A + + + Q+ N AVY+ + + +K K A Sbjct: 960 LKKEKCQIQQLEKEEDPASVNYLHVFALLNQLKQICNHPAVYFKDPESYKNHSSGKWAAF 1019 Query: 60 EVIIEK--ANAAPIIVAYHFNSDL---------ARLQKAFPQGRTLDKDPCTIQEWNEGK 108 ++ A+ ++V + + ++ A +G++ ++ + N+ Sbjct: 1020 VKLLNDSLASGYKVVVFSQYIQMIRIIALYLEEHAIEYALVRGKSQNRKEEIDRFSNDPN 1079 Query: 109 IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVY 168 + + G G+NL GN+++ + WW+ + Q ++R+ + G K VF+Y Sbjct: 1080 CRVFIGSLLAAGTGINLT-AGNVVIMYDRWWNPAKENQALDRV-----HRIGQKNTVFIY 1133 Query: 169 YLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIHV 205 L+ ++T++E + + K + + + +HV Sbjct: 1134 KLVTEDTLEEHIHYLIEKKMRLLNQVTTTQDSNILHV 1170 >gi|255311373|ref|ZP_05353943.1| putative helicase (SWF/SNF family) protein [Chlamydia trachomatis 6276] gi|255317674|ref|ZP_05358920.1| putative helicase (SWF/SNF family) protein [Chlamydia trachomatis 6276s] Length = 1199 Score = 121 bits (305), Expect = 5e-26, Method: Composition-based stats. Identities = 38/217 (17%), Positives = 90/217 (41%), Gaps = 24/217 (11%) Query: 7 FQRELYC--DLQGENIEAF----NSASKTVKCLQLANG-AVYYDEEKHWKEVHDEKIKAL 59 ++E L+ E A + + + Q+ N AVY+ + + +K K A Sbjct: 960 LKKEKCQIQQLEKEEDPASVNYLHVFALLNQLKQICNHPAVYFKDPESYKNHSSGKWAAF 1019 Query: 60 EVIIEK--ANAAPIIVAYHFNSDL---------ARLQKAFPQGRTLDKDPCTIQEWNEGK 108 ++ A+ ++V + + ++ A +G++ ++ + N+ Sbjct: 1020 VKLLNDSLASGYKVVVFSQYIQMIRIIALYLEEHAIEYALVRGKSQNRKEEIDRFSNDPN 1079 Query: 109 IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVY 168 + + G G+NL GN+++ + WW+ + Q ++R+ + G K VF+Y Sbjct: 1080 CRVFIGSLLAAGTGINLT-AGNVVIMYDRWWNPAKENQALDRV-----HRIGQKNTVFIY 1133 Query: 169 YLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIHV 205 L+ ++T++E + + K + + + +HV Sbjct: 1134 KLVTEDTLEEHIHYLIEKKMRLLNQVTTTQDSNILHV 1170 >gi|237804906|ref|YP_002889060.1| putative helicase (SWF/SNF family) [Chlamydia trachomatis B/TZ1A828/OT] gi|231273206|emb|CAX10119.1| putative helicase (SWF/SNF family) [Chlamydia trachomatis B/TZ1A828/OT] Length = 1199 Score = 121 bits (305), Expect = 5e-26, Method: Composition-based stats. Identities = 38/217 (17%), Positives = 90/217 (41%), Gaps = 24/217 (11%) Query: 7 FQRELYC--DLQGENIEAF----NSASKTVKCLQLANG-AVYYDEEKHWKEVHDEKIKAL 59 ++E L+ E A + + + Q+ N AVY+ + + +K K A Sbjct: 960 LKKEKCQIQQLEKEEDPASVNYLHVFALLNQLKQICNHPAVYFKDPESYKNHSSGKWAAF 1019 Query: 60 EVIIEK--ANAAPIIVAYHFNSDL---------ARLQKAFPQGRTLDKDPCTIQEWNEGK 108 ++ A+ ++V + + ++ A +G++ ++ + N+ Sbjct: 1020 VKLLNDSLASGYKVVVFSQYIQMIRIIALYLEEHAIEYALVRGKSQNRKEEIDRFSNDPN 1079 Query: 109 IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVY 168 + + G G+NL GN+++ + WW+ + Q ++R+ + G K VF+Y Sbjct: 1080 CRVFIGSLLAAGTGINLT-AGNVVIMYDRWWNPAKENQALDRV-----HRIGQKNTVFIY 1133 Query: 169 YLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIHV 205 L+ ++T++E + + K + + + +HV Sbjct: 1134 KLVTEDTLEEHIHYLIEKKMRLLNQVTTTQDSNILHV 1170 >gi|76789292|ref|YP_328378.1| SWF/SNF family helicase [Chlamydia trachomatis A/HAR-13] gi|237802984|ref|YP_002888178.1| putative helicase (SWF/SNF family) [Chlamydia trachomatis B/Jali20/OT] gi|76167822|gb|AAX50830.1| SWF/SNF family helicase [Chlamydia trachomatis A/HAR-13] gi|231274218|emb|CAX11012.1| putative helicase (SWF/SNF family) [Chlamydia trachomatis B/Jali20/OT] Length = 1199 Score = 121 bits (305), Expect = 5e-26, Method: Composition-based stats. Identities = 38/217 (17%), Positives = 90/217 (41%), Gaps = 24/217 (11%) Query: 7 FQRELYC--DLQGENIEAF----NSASKTVKCLQLANG-AVYYDEEKHWKEVHDEKIKAL 59 ++E L+ E A + + + Q+ N AVY+ + + +K K A Sbjct: 960 LKKEKCQIQQLEKEEDPASVNYLHVFALLNQLKQICNHPAVYFKDPESYKNHSSGKWAAF 1019 Query: 60 EVIIEK--ANAAPIIVAYHFNSDL---------ARLQKAFPQGRTLDKDPCTIQEWNEGK 108 ++ A+ ++V + + ++ A +G++ ++ + N+ Sbjct: 1020 VKLLNDSLASGYKVVVFSQYIQMIRIIALYLEEHAIEYALVRGKSQNRKEEIDRFSNDPN 1079 Query: 109 IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVY 168 + + G G+NL GN+++ + WW+ + Q ++R+ + G K VF+Y Sbjct: 1080 CRVFIGSLLAAGTGINLT-AGNVVIMYDRWWNPAKENQALDRV-----HRIGQKNTVFIY 1133 Query: 169 YLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIHV 205 L+ ++T++E + + K + + + +HV Sbjct: 1134 KLVTEDTLEEHIHYLIEKKMRLLNQVTTTQDSNILHV 1170 >gi|88602942|ref|YP_503120.1| SNF2-like protein [Methanospirillum hungatei JF-1] gi|88188404|gb|ABD41401.1| SNF2-related protein [Methanospirillum hungatei JF-1] Length = 1048 Score = 121 bits (304), Expect = 5e-26, Method: Composition-based stats. Identities = 37/209 (17%), Positives = 70/209 (33%), Gaps = 22/209 (10%) Query: 3 QYHKFQRELYCDLQGENIEAFNSA--SKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 Y ++ +L A A + + Q+ N +K K K+ L Sbjct: 815 LYQAVVLDMAKNLDKVEGIARKGAILAAITRLKQICNHPGRVGRDKTIKAERSGKVSRLL 874 Query: 61 VIIEK--ANAAPIIVAYHFNSDLARLQKAFPQ-----------GRTLDKDPCTIQEWNEG 107 +IE+ + ++ + + L + K I+E+ Sbjct: 875 EMIEEITSEGDSALIFSQYATFAEELAGMIEKQGDTPVLLLTGSTPRKKREQMIEEFQAS 934 Query: 108 KIPL-LFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVF 166 P+ + G GLNL + + WW+ Q +R + G KR V Sbjct: 935 TTPIIFVISLKAGGTGLNLTKATH-VFHVDRWWNPAVEDQATDR-----TYRIGQKRNVQ 988 Query: 167 VYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 V+ +I T++E + + K T+ +L Sbjct: 989 VHLMITAGTLEERIDLINQEKRTLAKEVL 1017 >gi|257064055|ref|YP_003143727.1| DNA/RNA helicase, superfamily II, SNF2 family [Slackia heliotrinireducens DSM 20476] gi|256791708|gb|ACV22378.1| DNA/RNA helicase, superfamily II, SNF2 family [Slackia heliotrinireducens DSM 20476] Length = 907 Score = 121 bits (304), Expect = 5e-26, Method: Composition-based stats. Identities = 42/210 (20%), Positives = 88/210 (41%), Gaps = 25/210 (11%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLAN--GAVYYDEEKHWKEVHDEKIKAL 59 + YH ++ L L ++E ++ + Q+ G VY D + K+ A+ Sbjct: 691 RLYHAREQRLQSKLAERDMEDIQLLAEITRLRQVCCDPGLVYEDYDGG-----SGKLDAI 745 Query: 60 EVIIEKAN--AAPIIVAYHFNSDLARLQKAFPQGRT-----LDKDPCT-----IQEWNEG 107 ++E+A + ++ + S L + K + + P + + +N+ Sbjct: 746 VNLVEQAREVGSKTVIFSQWVSFLESISKRLNRNGIAHDWIIGDTPASDRVGIVDAFNKD 805 Query: 108 KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFV 167 + P+L + G GLN+ G + + +W Q R+ + G +VFV Sbjct: 806 ETPVLLVSMRAGGVGLNMT-GASTAIIADPFWHEAAQTQAYSRLW-----RLGQDSSVFV 859 Query: 168 YYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 Y +IA+NTI++ +L K + + +++A Sbjct: 860 YQIIAENTIEDRILGLQHKKHDLGESVISA 889 >gi|251778971|ref|ZP_04821891.1| hypothetical ATP-dependent helicase [Clostridium botulinum E1 str. 'BoNT E Beluga'] gi|243083286|gb|EES49176.1| hypothetical ATP-dependent helicase [Clostridium botulinum E1 str. 'BoNT E Beluga'] Length = 1055 Score = 121 bits (304), Expect = 5e-26, Method: Composition-based stats. Identities = 45/220 (20%), Positives = 87/220 (39%), Gaps = 29/220 (13%) Query: 2 KQYHKFQRELYCDLQGENIEAFN----SASKTVKCLQLANGAVYYDEEKHWKEVHDEKIK 57 K Y + +++ L+ I++ N + + QL E+ E KI Sbjct: 832 KMYKMYVKDIQDKLK--QIDSRNNKIAIFAYLTRLRQLCLDPSIIVED---YEGGSGKIN 886 Query: 58 ALEVIIEKA--NAAPIIVAYHFNSDL---------ARLQKAFPQGRTLDKDPCTI--QEW 104 + +I+K+ N I++ F S L ++ + G T K+ + + Sbjct: 887 VAKELIKKSIKNNHKILLFSQFTSLLNKVCDELKSEQIFYLYLDGSTPSKERIRLAHEFN 946 Query: 105 NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA 164 N I + + G GLNL ++++ F WW+ Q +R + G K Sbjct: 947 NNEDIKIFLISLKAGGTGLNLT-SADMVIHFDPWWNPAIEDQATDR-----AHRIGQKNV 1000 Query: 165 VFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA-LKKETI 203 V V LI + +I+E +L K + + ++ LK++ + Sbjct: 1001 VRVIKLITKESIEEKILLLQEDKKALIEDVITGELKEDGL 1040 >gi|228999987|ref|ZP_04159559.1| Helicase, SNF2/RAD54 [Bacillus mycoides Rock3-17] gi|228759929|gb|EEM08903.1| Helicase, SNF2/RAD54 [Bacillus mycoides Rock3-17] Length = 867 Score = 121 bits (304), Expect = 5e-26, Method: Composition-based stats. Identities = 42/212 (19%), Positives = 78/212 (36%), Gaps = 23/212 (10%) Query: 3 QYHKFQRELYCDLQG-ENIEAFN-SASKTVKCLQLANG-AVYYDEEK-HWKEVHDEKIKA 58 Y + ++ +++G IE K Q+ N A+Y EE K + Sbjct: 644 LYEQLVQDTLQNIEGLTGIERRGFILMMLSKLKQICNHPALYLKEEAPKDIVQRSMKTQT 703 Query: 59 LEVIIE--KANAAPIIVAYHFNSDLARLQKAFPQ-----------GRTLDKDPCTIQEWN 105 L +IE K ++ + LQK + + I+++ Sbjct: 704 LMDLIENIKDQNESCLIFTQYIGMGNMLQKILEEKFGQRVLFLNGSVPKIERDKMIEQFQ 763 Query: 106 EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 G + + G GLNL N ++ + WW+ Q +R + G KR V Sbjct: 764 NGTYDIFILSLKAGGTGLNLT-AANHVIHYDRWWNPAVENQATDR-----AYRIGQKRFV 817 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 V+ LI T++E + + L K ++ ++ + Sbjct: 818 HVHKLITTGTLEEKIDEMLERKQSLSSAIITS 849 >gi|228994365|ref|ZP_04154249.1| Helicase, SNF2/RAD54 [Bacillus pseudomycoides DSM 12442] gi|228765382|gb|EEM14052.1| Helicase, SNF2/RAD54 [Bacillus pseudomycoides DSM 12442] Length = 867 Score = 121 bits (304), Expect = 5e-26, Method: Composition-based stats. Identities = 42/212 (19%), Positives = 78/212 (36%), Gaps = 23/212 (10%) Query: 3 QYHKFQRELYCDLQG-ENIEAFN-SASKTVKCLQLANG-AVYYDEEK-HWKEVHDEKIKA 58 Y + ++ +++G IE K Q+ N A+Y EE K + Sbjct: 644 LYEQLVQDTLQNIEGLTGIERRGFILMMLSKLKQICNHPALYLKEEAPKDIVQRSMKTQT 703 Query: 59 LEVIIE--KANAAPIIVAYHFNSDLARLQKAFPQ-----------GRTLDKDPCTIQEWN 105 L +IE K ++ + LQK + + I+++ Sbjct: 704 LMDLIENIKDQNESCLIFTQYIGMGNMLQKILEEKFGQRVLFLNGSVPKIERDKMIEQFQ 763 Query: 106 EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 G + + G GLNL N ++ + WW+ Q +R + G KR V Sbjct: 764 NGTYDIFILSLKAGGTGLNLT-AANHVIHYDRWWNPAVENQATDR-----AYRIGQKRFV 817 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 V+ LI T++E + + L K ++ ++ + Sbjct: 818 HVHKLITTGTLEEKIDEMLERKQSLSSAIITS 849 >gi|229008128|ref|ZP_04165659.1| Helicase, SNF2/RAD54 [Bacillus mycoides Rock1-4] gi|228753134|gb|EEM02641.1| Helicase, SNF2/RAD54 [Bacillus mycoides Rock1-4] Length = 867 Score = 121 bits (304), Expect = 5e-26, Method: Composition-based stats. Identities = 42/212 (19%), Positives = 78/212 (36%), Gaps = 23/212 (10%) Query: 3 QYHKFQRELYCDLQG-ENIEAFN-SASKTVKCLQLANG-AVYYDEEK-HWKEVHDEKIKA 58 Y + ++ +++G IE K Q+ N A+Y EE K + Sbjct: 644 LYEQLVQDTLQNIEGLTGIERRGFILMMLSKLKQICNHPALYLKEEAPKDIVQRSMKTQT 703 Query: 59 LEVIIE--KANAAPIIVAYHFNSDLARLQKAFPQ-----------GRTLDKDPCTIQEWN 105 L +IE K ++ + LQK + + I+++ Sbjct: 704 LMDLIENIKDQNESCLIFTQYIGMGNMLQKILEEKFGQRVLFLNGSVPKIERDKMIEQFQ 763 Query: 106 EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 G + + G GLNL N ++ + WW+ Q +R + G KR V Sbjct: 764 NGTYDIFILSLKAGGTGLNLT-AANHVIHYDRWWNPAVENQATDR-----AYRIGQKRFV 817 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 V+ LI T++E + + L K ++ ++ + Sbjct: 818 HVHKLITTGTLEEKIDEMLERKQSLSSAIITS 849 >gi|78222214|ref|YP_383961.1| SNF2-related:helicase-like:Zinc finger, SWIM-type [Geobacter metallireducens GS-15] gi|78193469|gb|ABB31236.1| SNF2-related:Helicase-like:Zinc finger, SWIM-type [Geobacter metallireducens GS-15] Length = 1142 Score = 121 bits (304), Expect = 6e-26, Method: Composition-based stats. Identities = 29/184 (15%), Positives = 66/184 (35%), Gaps = 20/184 (10%) Query: 25 SASKTVKCLQLANGA-VYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLAR 83 + + ++ QL + + + + ++ LE + + ++V F S L Sbjct: 947 ALTAILRLRQLCLSPRLLIADSREPSPKVEFLVEQLEELFTE--GHSVLVFSQFTSFLDI 1004 Query: 84 LQ----------KAFPQGRTLDKDPCTIQEWNEGKIP-LLFAHPASCGHGLNLQYGGNIL 132 ++ + + + + +G P + + G GLNL + Sbjct: 1005 VEGELSRRGVHYYRLDGSTPVPERKRLVTAFQKGDEPSVFLLSLKAGGKGLNLTR-ATYV 1063 Query: 133 VFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQD 192 WW+ Q +R + G R V + L+ ++TI+E +++ + K + Sbjct: 1064 FHLDPWWNPAVENQASDR-----AHRIGQTRQVTITRLVMRHTIEEKMMELKKRKLKLYH 1118 Query: 193 LLLN 196 LL Sbjct: 1119 ALLE 1122 >gi|307189408|gb|EFN73818.1| Putative DNA helicase Ino80 [Camponotus floridanus] Length = 1624 Score = 121 bits (304), Expect = 6e-26, Method: Composition-based stats. Identities = 33/176 (18%), Positives = 71/176 (40%), Gaps = 21/176 (11%) Query: 44 EEKHWKEVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQKAF----------PQG 91 +K K+ L+ ++ + +++ + L++ Sbjct: 1068 PDKQTLVTDAGKLSVLDSLLRRLKEQGHRVLIYSQMTKMIDLLEEYMYHRKHTFMRLDGS 1127 Query: 92 RTLDKDPCTIQEWNE-GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 + + ++ + I + + G G+NL + ++F+ W+ QQ ++R Sbjct: 1128 SKISDRRDMVADFQKRADIFVFLLSTRAGGLGINLT-AADTVIFYDSDWNPTVDQQAMDR 1186 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA--LKKETIH 204 + G + V VY LI + TI+E +LQR R KS IQ ++++ K +T+ Sbjct: 1187 -----AHRLGQTKQVTVYRLICKGTIEERILQRAREKSEIQRMVISGGNFKPDTLK 1237 >gi|113676533|ref|NP_001038584.1| INO80 complex homolog 1 [Danio rerio] gi|56207300|emb|CAI20655.1| novel protein similar to H.sapiens INOC1, INO80 complex homolog 1 (S. cerevisiae) (INOC1) [Danio rerio] Length = 1552 Score = 121 bits (304), Expect = 6e-26, Method: Composition-based stats. Identities = 32/176 (18%), Positives = 74/176 (42%), Gaps = 21/176 (11%) Query: 44 EEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRT-------- 93 +K K+ L++++ + + +++ + L++ + Sbjct: 1089 PDKESLITDSGKLHTLDLLLTRLKSQGHRVLIYSQMTRMIDLLEEYMVYRKHTYMRLDGS 1148 Query: 94 --LDKDPCTIQEWNEG-KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 + + + ++ I + + G G+NL + ++F+ W+ QQ ++R Sbjct: 1149 SKISERRDMVADFQSRTDIFVFLLSTRAGGLGINLT-AADTVIFYDSDWNPTVDQQAMDR 1207 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA--LKKETIH 204 + G + V VY LI + TI+E +LQR + KS IQ ++++ K +T+ Sbjct: 1208 -----AHRLGQTKQVTVYRLICKGTIEERILQRAKEKSEIQRMVISGGNFKPDTLK 1258 >gi|307276930|ref|ZP_07558040.1| protein, SNF2 family [Enterococcus faecalis TX2134] gi|306506353|gb|EFM75513.1| protein, SNF2 family [Enterococcus faecalis TX2134] gi|315143788|gb|EFT87804.1| protein, SNF2 family [Enterococcus faecalis TX2141] Length = 1065 Score = 121 bits (304), Expect = 6e-26, Method: Composition-based stats. Identities = 37/186 (19%), Positives = 79/186 (42%), Gaps = 21/186 (11%) Query: 24 NSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDL 81 + + + Q+ + E+ K++ ++ + A N +++ F S L Sbjct: 868 SILAGLTRLRQICCDPRLFIEDYT---GGSGKVEQVKDFLVAAKENNRRVLLFSQFTSML 924 Query: 82 ARLQKA---------FPQGRTLDKDPCTIQE-WNEGKIPLLFAHPASCGHGLNLQYGGNI 131 + L+K + +G T +D T+ +NEG+ + + G GLNL G + Sbjct: 925 SILEKELNELGLETFYLRGSTKPQDRLTMANAFNEGEKDVFLISLKAGGTGLNLT-GADT 983 Query: 132 LVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQ 191 ++ + LWW+ +Q R + G K+ V V+ +IA+ T++E + + K + Sbjct: 984 VILYDLWWNPAVEEQAAGR-----AHRMGQKKVVEVWRMIAEGTVEEKMNSLQQEKRELF 1038 Query: 192 DLLLNA 197 ++ Sbjct: 1039 QKVIQG 1044 >gi|257416863|ref|ZP_05593857.1| Snf2 family protein [Enterococcus faecalis AR01/DG] gi|257158691|gb|EEU88651.1| Snf2 family protein [Enterococcus faecalis ARO1/DG] Length = 1065 Score = 121 bits (304), Expect = 6e-26, Method: Composition-based stats. Identities = 37/186 (19%), Positives = 79/186 (42%), Gaps = 21/186 (11%) Query: 24 NSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDL 81 + + + Q+ + E+ K++ ++ + A N +++ F S L Sbjct: 868 SILAGLTRLRQICCDPRLFIEDYT---GGSGKVEQVKDFLVAAKENNRRVLLFSQFTSML 924 Query: 82 ARLQKA---------FPQGRTLDKDPCTIQE-WNEGKIPLLFAHPASCGHGLNLQYGGNI 131 + L+K + +G T +D T+ +NEG+ + + G GLNL G + Sbjct: 925 SILEKELNELGLETFYLRGSTKPQDRLTMANAFNEGEKDVFLISLKAGGTGLNLT-GADT 983 Query: 132 LVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQ 191 ++ + LWW+ +Q R + G K+ V V+ +IA+ T++E + + K + Sbjct: 984 VILYDLWWNPAVEEQAAGR-----AHRMGQKKVVEVWRMIAEGTVEEKMNSLQQEKRELF 1038 Query: 192 DLLLNA 197 ++ Sbjct: 1039 QKVIQG 1044 >gi|282890240|ref|ZP_06298770.1| hypothetical protein pah_c014o119 [Parachlamydia acanthamoebae str. Hall's coccus] gi|281499897|gb|EFB42186.1| hypothetical protein pah_c014o119 [Parachlamydia acanthamoebae str. Hall's coccus] Length = 883 Score = 121 bits (304), Expect = 6e-26, Method: Composition-based stats. Identities = 39/201 (19%), Positives = 71/201 (35%), Gaps = 18/201 (8%) Query: 13 CDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIE--KANAAP 70 +L G + ++ Q+ + ++ V K+ L +E Sbjct: 678 VELDGISKHRMEVLEAILRLRQICCHPLLVTAQEGSF-VASAKLDVLMQDLETLAEEGKK 736 Query: 71 IIVAYHFNSDLARLQKAFPQ---------GRTLDKDPCTIQEWNEGKIPLLFAHPASCGH 121 +V F S L + K F + G T +++ Q + IP + G Sbjct: 737 ALVYSQFTSMLGLIAKEFQKRGWNFVYLDGSTHNREKVVTQFQEDASIPFFLISLKAGGV 796 Query: 122 GLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVL 181 GLNL + + F WW+ Q I+R + G + V LIA +I+E + Sbjct: 797 GLNLT-SADYVYLFDPWWNEAIENQAIDR-----AHRIGRQDTVIAKRLIAIESIEEKIQ 850 Query: 182 QRLRTKSTIQDLLLNALKKET 202 + K + + L + +T Sbjct: 851 KLKENKRQLIESLFDETYGQT 871 >gi|256616806|ref|ZP_05473652.1| Snf2 family protein [Enterococcus faecalis ATCC 4200] gi|256596333|gb|EEU15509.1| Snf2 family protein [Enterococcus faecalis ATCC 4200] Length = 1065 Score = 121 bits (304), Expect = 6e-26, Method: Composition-based stats. Identities = 37/186 (19%), Positives = 79/186 (42%), Gaps = 21/186 (11%) Query: 24 NSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDL 81 + + + Q+ + E+ K++ ++ + A N +++ F S L Sbjct: 868 SILAGLTRLRQICCDPRLFIEDYT---GGSGKVEQVKDFLVAAKENNRRVLLFSQFTSML 924 Query: 82 ARLQKA---------FPQGRTLDKDPCTIQE-WNEGKIPLLFAHPASCGHGLNLQYGGNI 131 + L+K + +G T +D T+ +NEG+ + + G GLNL G + Sbjct: 925 SILEKELNELGLETFYLRGSTKPQDRLTMANAFNEGEKDVFLISLKAGGTGLNLT-GADT 983 Query: 132 LVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQ 191 ++ + LWW+ +Q R + G K+ V V+ +IA+ T++E + + K + Sbjct: 984 VILYDLWWNPAVEEQAAGR-----AHRMGQKKVVEVWRMIAEGTVEEKMNSLQQEKRELF 1038 Query: 192 DLLLNA 197 ++ Sbjct: 1039 QKVIQG 1044 >gi|227519520|ref|ZP_03949569.1| Snf2 family helicase [Enterococcus faecalis TX0104] gi|227073045|gb|EEI11008.1| Snf2 family helicase [Enterococcus faecalis TX0104] Length = 1065 Score = 121 bits (304), Expect = 6e-26, Method: Composition-based stats. Identities = 37/186 (19%), Positives = 79/186 (42%), Gaps = 21/186 (11%) Query: 24 NSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDL 81 + + + Q+ + E+ K++ ++ + A N +++ F S L Sbjct: 868 SILAGLTRLRQICCDPRLFIEDYT---GGSGKVEQVKDFLVAAKENNRRVLLFSQFTSML 924 Query: 82 ARLQKA---------FPQGRTLDKDPCTIQE-WNEGKIPLLFAHPASCGHGLNLQYGGNI 131 + L+K + +G T +D T+ +NEG+ + + G GLNL G + Sbjct: 925 SILEKELNELGLETFYLRGSTKPQDRLTMANAFNEGEKDVFLISLKAGGTGLNLT-GADT 983 Query: 132 LVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQ 191 ++ + LWW+ +Q R + G K+ V V+ +IA+ T++E + + K + Sbjct: 984 VILYDLWWNPAVEEQAAGR-----AHRMGQKKVVEVWRMIAEGTVEEKMNSLQQEKRELF 1038 Query: 192 DLLLNA 197 ++ Sbjct: 1039 QKVIQG 1044 >gi|330443940|ref|YP_004376926.1| helicase, Snf2/Rad54 family [Chlamydophila pecorum E58] gi|328807050|gb|AEB41223.1| helicase, Snf2/Rad54 family [Chlamydophila pecorum E58] Length = 1117 Score = 121 bits (304), Expect = 6e-26, Method: Composition-based stats. Identities = 37/211 (17%), Positives = 88/211 (41%), Gaps = 19/211 (9%) Query: 8 QRELYCDLQGENIEAF-NSASKTVKCLQLANG-AVYYDEEKHWKEVHDEKIKALEVIIEK 65 ++ L+ E F + + Q+ + AV++ + + + H K +++ Sbjct: 889 EKSQIQQLETEETTNFLHIFALLNHLKQICDHPAVFFKKPEEYHHHHSGKWNVFVKLLQD 948 Query: 66 --ANAAPIIVAYHFNSDLARLQKAFP---------QGRTLDKDPCTIQEWNEGKIPLLFA 114 A+ ++V + + + + QG++L++ + + + Sbjct: 949 SLASGYKVVVFSQYIHMIQIITQYLEEIGIKYASIQGKSLNRKEEIERFSTDPTCRVFVG 1008 Query: 115 HPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQN 174 + G G+NL GNI++ + WW+ + Q ++R+ + G K VF+Y LI +N Sbjct: 1009 SLLAAGTGINLT-AGNIVIMYDRWWNPAKENQALDRV-----HRFGQKNTVFIYKLITEN 1062 Query: 175 TIDELVLQRLRTKSTIQDLLLNALKKETIHV 205 T++E + + K + D ++ +H+ Sbjct: 1063 TLEERIHYLIEKKIHLLDKVIVTQDSNILHM 1093 >gi|256957920|ref|ZP_05562091.1| Snf2 family protein [Enterococcus faecalis DS5] gi|256948416|gb|EEU65048.1| Snf2 family protein [Enterococcus faecalis DS5] Length = 1065 Score = 121 bits (304), Expect = 6e-26, Method: Composition-based stats. Identities = 37/186 (19%), Positives = 79/186 (42%), Gaps = 21/186 (11%) Query: 24 NSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDL 81 + + + Q+ + E+ K++ ++ + A N +++ F S L Sbjct: 868 SILAGLTRLRQICCDPRLFIEDYT---GGSGKVEQVKDFLVAAKENNRRVLLFSQFTSML 924 Query: 82 ARLQKA---------FPQGRTLDKDPCTIQE-WNEGKIPLLFAHPASCGHGLNLQYGGNI 131 + L+K + +G T +D T+ +NEG+ + + G GLNL G + Sbjct: 925 SILEKELNELGLETFYLRGSTKPQDRLTMANAFNEGEKDVFLISLKAGGTGLNLT-GADT 983 Query: 132 LVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQ 191 ++ + LWW+ +Q R + G K+ V V+ +IA+ T++E + + K + Sbjct: 984 VILYDLWWNPAVEEQAAGR-----AHRMGQKKVVEVWRMIAEGTVEEKMNSLQQEKRELF 1038 Query: 192 DLLLNA 197 ++ Sbjct: 1039 QKVIQG 1044 >gi|315174973|gb|EFU18990.1| protein, SNF2 family [Enterococcus faecalis TX1346] Length = 1065 Score = 121 bits (304), Expect = 6e-26, Method: Composition-based stats. Identities = 37/186 (19%), Positives = 79/186 (42%), Gaps = 21/186 (11%) Query: 24 NSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDL 81 + + + Q+ + E+ K++ ++ + A N +++ F S L Sbjct: 868 SILAGLTRLRQICCDPRLFIEDYT---GGSGKVEQVKDFLVAAKENNRRVLLFSQFTSML 924 Query: 82 ARLQKA---------FPQGRTLDKDPCTIQE-WNEGKIPLLFAHPASCGHGLNLQYGGNI 131 + L+K + +G T +D T+ +NEG+ + + G GLNL G + Sbjct: 925 SILEKELNELGLETFYLRGSTKPQDRLTMANAFNEGEKDVFLISLKAGGTGLNLT-GADT 983 Query: 132 LVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQ 191 ++ + LWW+ +Q R + G K+ V V+ +IA+ T++E + + K + Sbjct: 984 VILYDLWWNPAVEEQAAGR-----AHRMGQKKVVEVWRMIAEGTVEEKMNSLQQEKRELF 1038 Query: 192 DLLLNA 197 ++ Sbjct: 1039 QKVIQG 1044 >gi|255974902|ref|ZP_05425488.1| Snf2 family protein [Enterococcus faecalis T2] gi|307278760|ref|ZP_07559826.1| protein, SNF2 family [Enterococcus faecalis TX0860] gi|255967774|gb|EET98396.1| Snf2 family protein [Enterococcus faecalis T2] gi|306504566|gb|EFM73770.1| protein, SNF2 family [Enterococcus faecalis TX0860] Length = 1065 Score = 121 bits (304), Expect = 6e-26, Method: Composition-based stats. Identities = 37/186 (19%), Positives = 79/186 (42%), Gaps = 21/186 (11%) Query: 24 NSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDL 81 + + + Q+ + E+ K++ ++ + A N +++ F S L Sbjct: 868 SILAGLTRLRQICCDPRLFIEDYT---GGSGKVEQVKDFLVAAKENNRRVLLFSQFTSML 924 Query: 82 ARLQKA---------FPQGRTLDKDPCTIQE-WNEGKIPLLFAHPASCGHGLNLQYGGNI 131 + L+K + +G T +D T+ +NEG+ + + G GLNL G + Sbjct: 925 SILEKELNELGLETFYLRGSTKPQDRLTMANAFNEGEKDVFLISLKAGGTGLNLT-GADT 983 Query: 132 LVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQ 191 ++ + LWW+ +Q R + G K+ V V+ +IA+ T++E + + K + Sbjct: 984 VILYDLWWNPAVEEQAAGR-----AHRMGQKKVVEVWRMIAEGTVEEKMNSLQQEKRELF 1038 Query: 192 DLLLNA 197 ++ Sbjct: 1039 QKVIQG 1044 >gi|257087662|ref|ZP_05582023.1| Snf2 family protein [Enterococcus faecalis D6] gi|300861266|ref|ZP_07107353.1| SNF2 family N-terminal domain protein [Enterococcus faecalis TUSoD Ef11] gi|307288690|ref|ZP_07568670.1| protein, SNF2 family [Enterococcus faecalis TX0109] gi|256995692|gb|EEU82994.1| Snf2 family protein [Enterococcus faecalis D6] gi|300850305|gb|EFK78055.1| SNF2 family N-terminal domain protein [Enterococcus faecalis TUSoD Ef11] gi|306500356|gb|EFM69693.1| protein, SNF2 family [Enterococcus faecalis TX0109] gi|315025539|gb|EFT37471.1| protein, SNF2 family [Enterococcus faecalis TX2137] gi|315035196|gb|EFT47128.1| protein, SNF2 family [Enterococcus faecalis TX0027] gi|315165356|gb|EFU09373.1| protein, SNF2 family [Enterococcus faecalis TX1302] Length = 1065 Score = 121 bits (304), Expect = 6e-26, Method: Composition-based stats. Identities = 37/186 (19%), Positives = 79/186 (42%), Gaps = 21/186 (11%) Query: 24 NSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDL 81 + + + Q+ + E+ K++ ++ + A N +++ F S L Sbjct: 868 SILAGLTRLRQICCDPRLFIEDYT---GGSGKVEQVKDFLVAAKENNRRVLLFSQFTSML 924 Query: 82 ARLQKA---------FPQGRTLDKDPCTIQE-WNEGKIPLLFAHPASCGHGLNLQYGGNI 131 + L+K + +G T +D T+ +NEG+ + + G GLNL G + Sbjct: 925 SILEKELNELGLETFYLRGSTKPQDRLTMANAFNEGEKDVFLISLKAGGTGLNLT-GADT 983 Query: 132 LVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQ 191 ++ + LWW+ +Q R + G K+ V V+ +IA+ T++E + + K + Sbjct: 984 VILYDLWWNPAVEEQAAGR-----AHRMGQKKVVEVWRMIAEGTVEEKMNSLQQEKRELF 1038 Query: 192 DLLLNA 197 ++ Sbjct: 1039 QKVIQG 1044 >gi|315168675|gb|EFU12692.1| protein, SNF2 family [Enterococcus faecalis TX1341] Length = 1065 Score = 121 bits (303), Expect = 6e-26, Method: Composition-based stats. Identities = 37/186 (19%), Positives = 79/186 (42%), Gaps = 21/186 (11%) Query: 24 NSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDL 81 + + + Q+ + E+ K++ ++ + A N +++ F S L Sbjct: 868 SILAGLTRLRQICCDPRLFIEDYT---GGSGKVEQVKDFLVAAKENNRRVLLFSQFTSML 924 Query: 82 ARLQKA---------FPQGRTLDKDPCTIQE-WNEGKIPLLFAHPASCGHGLNLQYGGNI 131 + L+K + +G T +D T+ +NEG+ + + G GLNL G + Sbjct: 925 SILEKELNELGLETFYLRGSTKPQDRLTMANAFNEGEKDVFLISLKAGGTGLNLT-GADT 983 Query: 132 LVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQ 191 ++ + LWW+ +Q R + G K+ V V+ +IA+ T++E + + K + Sbjct: 984 VILYDLWWNPAVEEQAAGR-----AHRMGQKKVVEVWRMIAEGTVEEKMNSLQQEKRELF 1038 Query: 192 DLLLNA 197 ++ Sbjct: 1039 QKVIQG 1044 >gi|166154770|ref|YP_001654888.1| helicase [Chlamydia trachomatis 434/Bu] gi|166155645|ref|YP_001653900.1| helicase [Chlamydia trachomatis L2b/UCH-1/proctitis] gi|301336044|ref|ZP_07224288.1| helicase [Chlamydia trachomatis L2tet1] gi|165930758|emb|CAP04255.1| putative helicase (SWF/SNF family) [Chlamydia trachomatis 434/Bu] gi|165931633|emb|CAP07209.1| putative helicase (SWF/SNF family) [Chlamydia trachomatis L2b/UCH-1/proctitis] Length = 1199 Score = 121 bits (303), Expect = 6e-26, Method: Composition-based stats. Identities = 38/217 (17%), Positives = 90/217 (41%), Gaps = 24/217 (11%) Query: 7 FQRELYC--DLQGENIEAF----NSASKTVKCLQLANG-AVYYDEEKHWKEVHDEKIKAL 59 ++E L+ E A + + + Q+ + AVY+ + + +K K A Sbjct: 960 LEKEKCQIQQLEKEEDPASVNYLHVFALLNQLKQICDHPAVYFKDPESYKNHSSGKWAAF 1019 Query: 60 EVIIEK--ANAAPIIVAYHFNSDL---------ARLQKAFPQGRTLDKDPCTIQEWNEGK 108 ++ A+ ++V + + ++ A QG++ ++ + N+ Sbjct: 1020 VKLLNDSLASGYKVVVFSQYIQMIRIIALYLEEHAIEYALVQGKSQNRKEEIDRFSNDPN 1079 Query: 109 IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVY 168 + + G G+NL GN+++ + WW+ + Q ++R+ + G K VF+Y Sbjct: 1080 CRVFIGSLLAAGTGINLT-AGNVVIMYDRWWNPAKENQALDRV-----HRIGQKNTVFIY 1133 Query: 169 YLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIHV 205 L+ ++T++E + + K + + + +HV Sbjct: 1134 KLVTEDTLEEHIHYLIEKKMRLLNQVTTTQDSNILHV 1170 >gi|315162049|gb|EFU06066.1| protein, SNF2 family [Enterococcus faecalis TX0645] Length = 1065 Score = 121 bits (303), Expect = 6e-26, Method: Composition-based stats. Identities = 37/186 (19%), Positives = 79/186 (42%), Gaps = 21/186 (11%) Query: 24 NSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDL 81 + + + Q+ + E+ K++ ++ + A N +++ F S L Sbjct: 868 SILAGLTRLRQICCDPRLFIEDYT---GGSGKVEQVKDFLVAAKENNRRVLLFSQFTSML 924 Query: 82 ARLQKA---------FPQGRTLDKDPCTIQE-WNEGKIPLLFAHPASCGHGLNLQYGGNI 131 + L+K + +G T +D T+ +NEG+ + + G GLNL G + Sbjct: 925 SILEKELNELGLETFYLRGSTKPQDRLTMANAFNEGEKDVFLISLKAGGTGLNLT-GADT 983 Query: 132 LVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQ 191 ++ + LWW+ +Q R + G K+ V V+ +IA+ T++E + + K + Sbjct: 984 VILYDLWWNPAVEEQAAGR-----AHRMGQKKVVEVWRMIAEGTVEEKMNSLQQEKRELF 1038 Query: 192 DLLLNA 197 ++ Sbjct: 1039 QKVIQG 1044 >gi|257079857|ref|ZP_05574218.1| Snf2 family protein [Enterococcus faecalis JH1] gi|294780417|ref|ZP_06745783.1| SNF2 family N-terminal domain protein [Enterococcus faecalis PC1.1] gi|307269625|ref|ZP_07550961.1| protein, SNF2 family [Enterococcus faecalis TX4248] gi|256987887|gb|EEU75189.1| Snf2 family protein [Enterococcus faecalis JH1] gi|294452517|gb|EFG20953.1| SNF2 family N-terminal domain protein [Enterococcus faecalis PC1.1] gi|306514042|gb|EFM82627.1| protein, SNF2 family [Enterococcus faecalis TX4248] gi|329570678|gb|EGG52395.1| protein, SNF2 family [Enterococcus faecalis TX1467] Length = 1065 Score = 121 bits (303), Expect = 6e-26, Method: Composition-based stats. Identities = 37/186 (19%), Positives = 79/186 (42%), Gaps = 21/186 (11%) Query: 24 NSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDL 81 + + + Q+ + E+ K++ ++ + A N +++ F S L Sbjct: 868 SILAGLTRLRQICCDPRLFIEDYT---GGSGKVEQVKDFLVAAKENNRRVLLFSQFTSML 924 Query: 82 ARLQKA---------FPQGRTLDKDPCTIQE-WNEGKIPLLFAHPASCGHGLNLQYGGNI 131 + L+K + +G T +D T+ +NEG+ + + G GLNL G + Sbjct: 925 SILEKELNELGLETFYLRGSTKPQDRLTMANAFNEGEKDVFLISLKAGGTGLNLT-GADT 983 Query: 132 LVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQ 191 ++ + LWW+ +Q R + G K+ V V+ +IA+ T++E + + K + Sbjct: 984 VILYDLWWNPAVEEQAAGR-----AHRMGQKKVVEVWRMIAEGTVEEKMNSLQQEKRELF 1038 Query: 192 DLLLNA 197 ++ Sbjct: 1039 QKVIQG 1044 >gi|255971908|ref|ZP_05422494.1| conserved hypothetical protein [Enterococcus faecalis T1] gi|312953715|ref|ZP_07772550.1| protein, SNF2 family [Enterococcus faecalis TX0102] gi|255962926|gb|EET95402.1| conserved hypothetical protein [Enterococcus faecalis T1] gi|295113640|emb|CBL32277.1| Superfamily II DNA/RNA helicases, SNF2 family [Enterococcus sp. 7L76] gi|310628362|gb|EFQ11645.1| protein, SNF2 family [Enterococcus faecalis TX0102] gi|315149934|gb|EFT93950.1| protein, SNF2 family [Enterococcus faecalis TX0012] gi|315151814|gb|EFT95830.1| protein, SNF2 family [Enterococcus faecalis TX0031] gi|315159334|gb|EFU03351.1| protein, SNF2 family [Enterococcus faecalis TX0312] gi|323481616|gb|ADX81055.1| SNF2-type helicase [Enterococcus faecalis 62] Length = 1065 Score = 121 bits (303), Expect = 6e-26, Method: Composition-based stats. Identities = 37/186 (19%), Positives = 79/186 (42%), Gaps = 21/186 (11%) Query: 24 NSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDL 81 + + + Q+ + E+ K++ ++ + A N +++ F S L Sbjct: 868 SILAGLTRLRQICCDPRLFIEDYT---GGSGKVEQVKDFLVAAKENNRRVLLFSQFTSML 924 Query: 82 ARLQKA---------FPQGRTLDKDPCTIQE-WNEGKIPLLFAHPASCGHGLNLQYGGNI 131 + L+K + +G T +D T+ +NEG+ + + G GLNL G + Sbjct: 925 SILEKELNELGLETFYLRGSTKPQDRLTMANAFNEGEKDVFLISLKAGGTGLNLT-GADT 983 Query: 132 LVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQ 191 ++ + LWW+ +Q R + G K+ V V+ +IA+ T++E + + K + Sbjct: 984 VILYDLWWNPAVEEQAAGR-----AHRMGQKKVVEVWRMIAEGTVEEKMNSLQQEKRELF 1038 Query: 192 DLLLNA 197 ++ Sbjct: 1039 QKVIQG 1044 >gi|66801511|ref|XP_629681.1| SNF2-related domain-containing protein [Dictyostelium discoideum AX4] gi|60463108|gb|EAL61303.1| SNF2-related domain-containing protein [Dictyostelium discoideum AX4] Length = 2129 Score = 121 bits (303), Expect = 6e-26, Method: Composition-based stats. Identities = 34/163 (20%), Positives = 66/163 (40%), Gaps = 19/163 (11%) Query: 52 HDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQK----------AFPQGRTLDKDPC 99 K++ L+ +++ +++ F + L+ LD Sbjct: 1765 DSGKLQVLDKLLKDLKVGGHRVLIYSQFTKMINILEDFMIFRKYKYLRLDGSSKLDDRRD 1824 Query: 100 TIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQ 158 + ++ + I +CG G+NL + ++F+ W+ +Q R + Sbjct: 1825 MVDDFQSDPSIFAFLLSTRACGIGINLT-SADTVIFYDSDWNPTVDEQA-----QDRAHR 1878 Query: 159 AGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 G R V VY LI +NTI+E +L+R + K IQ +++ K E Sbjct: 1879 LGQTRPVTVYRLITKNTIEEKILKRAKQKHQIQSIVIAGGKFE 1921 >gi|229549191|ref|ZP_04437916.1| Snf2 family helicase [Enterococcus faecalis ATCC 29200] gi|229305428|gb|EEN71424.1| Snf2 family helicase [Enterococcus faecalis ATCC 29200] Length = 1065 Score = 121 bits (303), Expect = 6e-26, Method: Composition-based stats. Identities = 37/186 (19%), Positives = 79/186 (42%), Gaps = 21/186 (11%) Query: 24 NSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDL 81 + + + Q+ + E+ K++ ++ + A N +++ F S L Sbjct: 868 SILAGLTRLRQICCDPRLFIEDYT---GGSGKVEQVKDFLVAAKENNRRVLLFSQFTSML 924 Query: 82 ARLQKA---------FPQGRTLDKDPCTIQE-WNEGKIPLLFAHPASCGHGLNLQYGGNI 131 + L+K + +G T +D T+ +NEG+ + + G GLNL G + Sbjct: 925 SILEKELNELGLETFYLRGSTKPQDRLTMANAFNEGEKDVFLISLKAGGTGLNLT-GADT 983 Query: 132 LVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQ 191 ++ + LWW+ +Q R + G K+ V V+ +IA+ T++E + + K + Sbjct: 984 VILYDLWWNPAVEEQAAGR-----AHRMGQKKVVEVWRMIAEGTVEEKMNSLQQEKRELF 1038 Query: 192 DLLLNA 197 ++ Sbjct: 1039 QKVIQG 1044 >gi|327535910|gb|AEA94744.1| Snf2 family protein [Enterococcus faecalis OG1RF] Length = 1065 Score = 121 bits (303), Expect = 6e-26, Method: Composition-based stats. Identities = 37/186 (19%), Positives = 79/186 (42%), Gaps = 21/186 (11%) Query: 24 NSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDL 81 + + + Q+ + E+ K++ ++ + A N +++ F S L Sbjct: 868 SILAGLTRLRQICCDPRLFIEDYT---GGSGKVEQVKDFLVAAKENNRRVLLFSQFTSML 924 Query: 82 ARLQKA---------FPQGRTLDKDPCTIQE-WNEGKIPLLFAHPASCGHGLNLQYGGNI 131 + L+K + +G T +D T+ +NEG+ + + G GLNL G + Sbjct: 925 SILEKELNELGLETFYLRGSTKPQDRLTMANAFNEGEKDVFLISLKAGGTGLNLT-GADT 983 Query: 132 LVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQ 191 ++ + LWW+ +Q R + G K+ V V+ +IA+ T++E + + K + Sbjct: 984 VILYDLWWNPAVEEQAAGR-----AHRMGQKKVVEVWRMIAEGTVEEKMNSLQQEKRELF 1038 Query: 192 DLLLNA 197 ++ Sbjct: 1039 QKVIQG 1044 >gi|315170383|gb|EFU14400.1| protein, SNF2 family [Enterococcus faecalis TX1342] Length = 1065 Score = 121 bits (303), Expect = 6e-26, Method: Composition-based stats. Identities = 37/186 (19%), Positives = 79/186 (42%), Gaps = 21/186 (11%) Query: 24 NSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDL 81 + + + Q+ + E+ K++ ++ + A N +++ F S L Sbjct: 868 SILAGLTRLRQICCDPRLFIEDYT---GGSGKVEQVKDFLVAAKENNRRVLLFSQFTSML 924 Query: 82 ARLQKA---------FPQGRTLDKDPCTIQE-WNEGKIPLLFAHPASCGHGLNLQYGGNI 131 + L+K + +G T +D T+ +NEG+ + + G GLNL G + Sbjct: 925 SILEKELNELGLETFYLRGSTKPQDRLTMANAFNEGEKDVFLISLKAGGTGLNLT-GADT 983 Query: 132 LVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQ 191 ++ + LWW+ +Q R + G K+ V V+ +IA+ T++E + + K + Sbjct: 984 VILYDLWWNPAVEEQAAGR-----AHRMGQKKVVEVWRMIAEGTVEEKMNSLQQEKRELF 1038 Query: 192 DLLLNA 197 ++ Sbjct: 1039 QKVIQG 1044 >gi|257090879|ref|ZP_05585240.1| conserved hypothetical protein [Enterococcus faecalis CH188] gi|312902516|ref|ZP_07761722.1| protein, SNF2 family [Enterococcus faecalis TX0635] gi|256999691|gb|EEU86211.1| conserved hypothetical protein [Enterococcus faecalis CH188] gi|310634186|gb|EFQ17469.1| protein, SNF2 family [Enterococcus faecalis TX0635] gi|315579675|gb|EFU91866.1| protein, SNF2 family [Enterococcus faecalis TX0630] Length = 1065 Score = 121 bits (303), Expect = 6e-26, Method: Composition-based stats. Identities = 37/186 (19%), Positives = 79/186 (42%), Gaps = 21/186 (11%) Query: 24 NSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDL 81 + + + Q+ + E+ K++ ++ + A N +++ F S L Sbjct: 868 SILAGLTRLRQICCDPRLFIEDYT---GGSGKVEQVKDFLVAAKENNRRVLLFSQFTSML 924 Query: 82 ARLQKA---------FPQGRTLDKDPCTIQE-WNEGKIPLLFAHPASCGHGLNLQYGGNI 131 + L+K + +G T +D T+ +NEG+ + + G GLNL G + Sbjct: 925 SILEKELNELGLETFYLRGSTKPQDRLTMANAFNEGEKDVFLISLKAGGTGLNLT-GADT 983 Query: 132 LVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQ 191 ++ + LWW+ +Q R + G K+ V V+ +IA+ T++E + + K + Sbjct: 984 VILYDLWWNPAVEEQAAGR-----AHRMGQKKVVEVWRMIAEGTVEEKMNSLQQEKRELF 1038 Query: 192 DLLLNA 197 ++ Sbjct: 1039 QKVIQG 1044 >gi|256853990|ref|ZP_05559355.1| Snf2 family protein [Enterococcus faecalis T8] gi|307290304|ref|ZP_07570220.1| protein, SNF2 family [Enterococcus faecalis TX0411] gi|256710933|gb|EEU25976.1| Snf2 family protein [Enterococcus faecalis T8] gi|306498725|gb|EFM68226.1| protein, SNF2 family [Enterococcus faecalis TX0411] gi|315030488|gb|EFT42420.1| protein, SNF2 family [Enterococcus faecalis TX4000] Length = 1065 Score = 121 bits (303), Expect = 6e-26, Method: Composition-based stats. Identities = 37/186 (19%), Positives = 79/186 (42%), Gaps = 21/186 (11%) Query: 24 NSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDL 81 + + + Q+ + E+ K++ ++ + A N +++ F S L Sbjct: 868 SILAGLTRLRQICCDPRLFIEDYT---GGSGKVEQVKDFLVAAKENNRRVLLFSQFTSML 924 Query: 82 ARLQKA---------FPQGRTLDKDPCTIQE-WNEGKIPLLFAHPASCGHGLNLQYGGNI 131 + L+K + +G T +D T+ +NEG+ + + G GLNL G + Sbjct: 925 SILEKELNELGLETFYLRGSTKPQDRLTMANAFNEGEKDVFLISLKAGGTGLNLT-GADT 983 Query: 132 LVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQ 191 ++ + LWW+ +Q R + G K+ V V+ +IA+ T++E + + K + Sbjct: 984 VILYDLWWNPAVEEQAAGR-----AHRMGQKKVVEVWRMIAEGTVEEKMNSLQQEKRELF 1038 Query: 192 DLLLNA 197 ++ Sbjct: 1039 QKVIQG 1044 >gi|229544926|ref|ZP_04433651.1| Snf2 family helicase [Enterococcus faecalis TX1322] gi|229309818|gb|EEN75805.1| Snf2 family helicase [Enterococcus faecalis TX1322] Length = 1065 Score = 121 bits (303), Expect = 6e-26, Method: Composition-based stats. Identities = 37/186 (19%), Positives = 79/186 (42%), Gaps = 21/186 (11%) Query: 24 NSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDL 81 + + + Q+ + E+ K++ ++ + A N +++ F S L Sbjct: 868 SILAGLTRLRQICCDPRLFIEDYT---GGSGKVEQVKDFLVAAKENNRRVLLFSQFTSML 924 Query: 82 ARLQKA---------FPQGRTLDKDPCTIQE-WNEGKIPLLFAHPASCGHGLNLQYGGNI 131 + L+K + +G T +D T+ +NEG+ + + G GLNL G + Sbjct: 925 SILEKELNELGLETFYLRGSTKPQDRLTMANAFNEGEKDVFLISLKAGGTGLNLT-GADT 983 Query: 132 LVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQ 191 ++ + LWW+ +Q R + G K+ V V+ +IA+ T++E + + K + Sbjct: 984 VILYDLWWNPAVEEQAAGR-----AHRMGQKKVVEVWRMIAEGTVEEKMNSLQQEKRELF 1038 Query: 192 DLLLNA 197 ++ Sbjct: 1039 QKVIQG 1044 >gi|29377168|ref|NP_816322.1| Snf2 family protein [Enterococcus faecalis V583] gi|227554179|ref|ZP_03984226.1| Snf2 family helicase [Enterococcus faecalis HH22] gi|256763318|ref|ZP_05503898.1| Snf2 family protein [Enterococcus faecalis T3] gi|256963798|ref|ZP_05567969.1| Snf2 family protein [Enterococcus faecalis HIP11704] gi|257084340|ref|ZP_05578701.1| Snf2 family protein [Enterococcus faecalis Fly1] gi|257421693|ref|ZP_05598683.1| Snf2 family protein [Enterococcus faecalis X98] gi|307271745|ref|ZP_07553016.1| protein, SNF2 family [Enterococcus faecalis TX0855] gi|312900055|ref|ZP_07759372.1| protein, SNF2 family [Enterococcus faecalis TX0470] gi|29344634|gb|AAO82392.1| Snf2 family protein [Enterococcus faecalis V583] gi|227176678|gb|EEI57650.1| Snf2 family helicase [Enterococcus faecalis HH22] gi|256684569|gb|EEU24264.1| Snf2 family protein [Enterococcus faecalis T3] gi|256954294|gb|EEU70926.1| Snf2 family protein [Enterococcus faecalis HIP11704] gi|256992370|gb|EEU79672.1| Snf2 family protein [Enterococcus faecalis Fly1] gi|257163517|gb|EEU93477.1| Snf2 family protein [Enterococcus faecalis X98] gi|306511623|gb|EFM80622.1| protein, SNF2 family [Enterococcus faecalis TX0855] gi|311292812|gb|EFQ71368.1| protein, SNF2 family [Enterococcus faecalis TX0470] gi|315155557|gb|EFT99573.1| protein, SNF2 family [Enterococcus faecalis TX0043] gi|315573810|gb|EFU86001.1| protein, SNF2 family [Enterococcus faecalis TX0309B] gi|315580246|gb|EFU92437.1| protein, SNF2 family [Enterococcus faecalis TX0309A] Length = 1065 Score = 121 bits (303), Expect = 6e-26, Method: Composition-based stats. Identities = 37/186 (19%), Positives = 79/186 (42%), Gaps = 21/186 (11%) Query: 24 NSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDL 81 + + + Q+ + E+ K++ ++ + A N +++ F S L Sbjct: 868 SILAGLTRLRQICCDPRLFIEDYT---GGSGKVEQVKDFLVAAKENNRRVLLFSQFTSML 924 Query: 82 ARLQKA---------FPQGRTLDKDPCTIQE-WNEGKIPLLFAHPASCGHGLNLQYGGNI 131 + L+K + +G T +D T+ +NEG+ + + G GLNL G + Sbjct: 925 SILEKELNELGLETFYLRGSTKPQDRLTMANAFNEGEKDVFLISLKAGGTGLNLT-GADT 983 Query: 132 LVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQ 191 ++ + LWW+ +Q R + G K+ V V+ +IA+ T++E + + K + Sbjct: 984 VILYDLWWNPAVEEQAAGR-----AHRMGQKKVVEVWRMIAEGTVEEKMNSLQQEKRELF 1038 Query: 192 DLLLNA 197 ++ Sbjct: 1039 QKVIQG 1044 >gi|195109608|ref|XP_001999375.1| GI24474 [Drosophila mojavensis] gi|193915969|gb|EDW14836.1| GI24474 [Drosophila mojavensis] Length = 1663 Score = 121 bits (303), Expect = 6e-26, Method: Composition-based stats. Identities = 38/211 (18%), Positives = 79/211 (37%), Gaps = 24/211 (11%) Query: 9 RELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEK--A 66 R + C+ + C L + +K K+ L+ ++ + A Sbjct: 1128 RHMQCENVLGRELVSTGLAL---CKPLNGWSSIVVPDKETLITDAGKLFVLDSLLTRLKA 1184 Query: 67 NAAPIIVAYHFNSDLARLQKAF----------PQGRTLDKDPCTIQEWN-EGKIPLLFAH 115 +++ + L++ + + ++ I + Sbjct: 1185 EGHRVLIYSQMTKMIDLLEEYMWHRKHRYMRLDGSSKISARRDMVADFQTRADIFVFLLS 1244 Query: 116 PASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNT 175 + G G+NL + ++F+ W+ QQ ++R + G + V VY LI + T Sbjct: 1245 TRAGGLGINLT-AADTVIFYDSDWNPTVDQQAMDR-----AHRLGQTKQVTVYRLICKGT 1298 Query: 176 IDELVLQRLRTKSTIQDLLLNA--LKKETIH 204 I+E +LQR R KS IQ ++++ K +T+ Sbjct: 1299 IEERILQRAREKSEIQRMVISGGNFKPDTLK 1329 >gi|29828520|ref|NP_823154.1| SNF2/RAD54 family helicase [Streptomyces avermitilis MA-4680] gi|29605624|dbj|BAC69689.1| putative SNF2/RAD54 family helicase [Streptomyces avermitilis MA-4680] Length = 962 Score = 121 bits (303), Expect = 6e-26, Method: Composition-based stats. Identities = 34/211 (16%), Positives = 68/211 (32%), Gaps = 24/211 (11%) Query: 3 QYHKFQRELYCDLQGENIEAFNSASK--TVKCLQLANG-AVYYDEE-----KHWKEVHDE 54 Y RE ++ Q+ + A+Y E+ Sbjct: 733 LYEAVVRESMLAIETAEGIGRRGLVLKLLTSLKQICDHPALYLKEDAGGTAGLAARSGKL 792 Query: 55 KIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFP----------QGRTLDKDPCTIQEW 104 + + + +V + + G + + + + Sbjct: 793 ALLDELLDTLLSEDGSALVFTQYVGMARLITAHLASRAVPVELLHGGTPVPERERMVDRF 852 Query: 105 NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA 164 G P+L + G GLNL G+ +V F WW+ +Q +R + G + Sbjct: 853 QSGTTPVLVLSLKAAGTGLNLTRAGH-VVHFDRWWNPAVEEQATDR-----AYRIGQTQP 906 Query: 165 VFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 V V+ LI + T+++ + + L K + D +L Sbjct: 907 VQVHRLITEGTVEDRIAEMLEAKRALADAIL 937 >gi|205375279|ref|ZP_03228069.1| SNF2 family helicase [Bacillus coahuilensis m4-4] Length = 248 Score = 121 bits (303), Expect = 7e-26, Method: Composition-based stats. Identities = 40/212 (18%), Positives = 76/212 (35%), Gaps = 23/212 (10%) Query: 3 QYHKFQRELYCDLQ--GENIEAFNSASKTVKCLQLANGA-VYYDEEKHWKEVH-DEKIKA 58 Y + +E + L+ + QL N +Y+ EE + K+ Sbjct: 24 LYEQLVQETFEKLKTLKGFERKGLILQMLGRLKQLCNHPSLYFKEEVPVDVLKRSYKMAK 83 Query: 59 LEVIIEKANAAPI--IVAYHFNSDLARLQKAFPQ-----------GRTLDKDPCTIQEWN 105 L I+E + +V + +Q + + +Q++ Sbjct: 84 LHEIVENVVESKEACLVFTQYIGMGEMIQDYVKKRFGVHAPFLNGSMPKQQRDKLVQQFQ 143 Query: 106 EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 G+ P+ + G GLNL N +V + WW+ Q +R + G + V Sbjct: 144 NGEFPVFILSLKAGGTGLNLT-AANHVVHYDRWWNPAVENQATDR-----AYRIGQTKFV 197 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 V+ LIA T++E + L K + D ++ + Sbjct: 198 HVHKLIASGTLEEKIDGMLEKKQALNDDIIQS 229 >gi|149196419|ref|ZP_01873474.1| hypothetical protein LNTAR_14717 [Lentisphaera araneosa HTCC2155] gi|149140680|gb|EDM29078.1| hypothetical protein LNTAR_14717 [Lentisphaera araneosa HTCC2155] Length = 1035 Score = 121 bits (303), Expect = 7e-26, Method: Composition-based stats. Identities = 38/215 (17%), Positives = 70/215 (32%), Gaps = 27/215 (12%) Query: 1 MKQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAV------YYDEEKHWKEVHDE 54 + Y + R+ L+ N A N + + QL+ + Y + Sbjct: 809 IDLYQREMRQARQSLKAGN--AMNVLASLTRLRQLSCHSAFGCPEEYRPDPDLPLAQRSP 866 Query: 55 KIKALEVIIEK--ANAAPIIVAYHFNSDLARLQK---------AFPQGRTL-DKDPCTIQ 102 K A + A + F L ++K G T K + Sbjct: 867 KAAAFIEKAKDLMAEGHSCLFFSQFTGILKEIEKELHNEHIKTHMITGETPSQKRSKIVD 926 Query: 103 EW-NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGF 161 E+ + + G GLNL + + F WW+ Q I+R + G Sbjct: 927 EFSESPDASVFLLSLKAAGTGLNLTRASYVFI-FDPWWNPAAENQAIDR-----SHRIGQ 980 Query: 162 KRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 V +Y +I+ ++++E V K + D ++ Sbjct: 981 DNPVIIYRMISADSVEEKVAALQAEKQKLFDEIIE 1015 >gi|323126628|gb|ADX23925.1| SWF/SNF family helicase [Streptococcus dysgalactiae subsp. equisimilis ATCC 12394] Length = 1030 Score = 121 bits (303), Expect = 7e-26, Method: Composition-based stats. Identities = 34/184 (18%), Positives = 67/184 (36%), Gaps = 22/184 (11%) Query: 26 ASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLAR 83 S + Q+ + + + K+++L ++ + N ++ F L Sbjct: 837 LSGITRLRQICDTPSLFMDYD----GESGKLESLRTLLLQIKENGHRALIFSQFRGMLDL 892 Query: 84 LQKAFP----------QGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILV 133 ++ ++ + +N G + G GLNL G + +V Sbjct: 893 AKQEMDALGLTAYQMTGSTPANERQEMTRAFNNGSKDAFLISLKAGGVGLNLT-GADTVV 951 Query: 134 FFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDL 193 LWW+ Q I R + G + V VY LI + TI+E +L+ +K + Sbjct: 952 LIDLWWNPAVEMQAISR-----AHRIGQEDNVEVYRLITRGTIEEKILELQESKRNLVTT 1006 Query: 194 LLNA 197 +L+ Sbjct: 1007 VLDG 1010 >gi|251781815|ref|YP_002996117.1| SWF/SNF family helicase [Streptococcus dysgalactiae subsp. equisimilis GGS_124] gi|242390444|dbj|BAH80903.1| SWF/SNF family helicase [Streptococcus dysgalactiae subsp. equisimilis GGS_124] Length = 1032 Score = 121 bits (303), Expect = 7e-26, Method: Composition-based stats. Identities = 34/184 (18%), Positives = 67/184 (36%), Gaps = 22/184 (11%) Query: 26 ASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLAR 83 S + Q+ + + + K+++L ++ + N ++ F L Sbjct: 839 LSGITRLRQICDTPSLFMDYD----GESGKLESLRTLLLQIKENGHRALIFSQFRGMLDL 894 Query: 84 LQKAFP----------QGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILV 133 ++ ++ + +N G + G GLNL G + +V Sbjct: 895 AKQEMDALGLTAYQMTGSTPANERQEMTRAFNNGSKDAFLISLKAGGVGLNLT-GADTVV 953 Query: 134 FFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDL 193 LWW+ Q I R + G + V VY LI + TI+E +L+ +K + Sbjct: 954 LIDLWWNPAVEMQAISR-----AHRIGQEDNVEVYRLITRGTIEEKILELQESKRNLVTT 1008 Query: 194 LLNA 197 +L+ Sbjct: 1009 VLDG 1012 >gi|124515406|gb|EAY56916.1| DNA/RNA helicase, SNF2 family [Leptospirillum rubarum] Length = 882 Score = 121 bits (303), Expect = 7e-26, Method: Composition-based stats. Identities = 39/209 (18%), Positives = 74/209 (35%), Gaps = 22/209 (10%) Query: 4 YHKFQRELYCDLQGENIEAFNSASK--TVKCLQLANGAVYYDEEKHWKEVHDEKIKALEV 61 Y K +EL L + A ++ Q+ N + + W K L Sbjct: 650 YRKTVKELESALDKTDGIARKGLVLAFLMRFKQICNHPSQWLGDGGWNPKDSGKFHRLAE 709 Query: 62 IIE--KANAAPIIVAYHFN-------SDLARLQKA----FPQGRTLDKDPCTIQEWNEG- 107 I E A +++ F + L + G + K ++ + E Sbjct: 710 IAETVAAKQEKMLIFTQFQEATLPLAAFLGGIFGRDGLVLHGGTPVGKRRELVRRFQEDE 769 Query: 108 KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFV 167 P + G GLNL + +V F WW+ Q +R + G + V V Sbjct: 770 DTPFFVLSLKAGGTGLNLT-AASHVVHFDRWWNPAVENQATDRAW-----RIGQHKNVLV 823 Query: 168 YYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + + + T++E + + +R+K+ + +L Sbjct: 824 HKFLCRGTVEERIDKLIRSKTELVREVLE 852 >gi|257081744|ref|ZP_05576105.1| Snf2 family protein [Enterococcus faecalis E1Sol] gi|256989774|gb|EEU77076.1| Snf2 family protein [Enterococcus faecalis E1Sol] Length = 1065 Score = 121 bits (303), Expect = 7e-26, Method: Composition-based stats. Identities = 37/186 (19%), Positives = 79/186 (42%), Gaps = 21/186 (11%) Query: 24 NSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDL 81 + + + Q+ + E+ K++ ++ + A N +++ F S L Sbjct: 868 SILAGLTRLRQICCDPRLFIEDYT---GGSGKVEQVKDFLVAAKENNRRVLLFSQFTSML 924 Query: 82 ARLQKA---------FPQGRTLDKDPCTIQE-WNEGKIPLLFAHPASCGHGLNLQYGGNI 131 + L+K + +G T +D T+ +NEG+ + + G GLNL G + Sbjct: 925 SILEKELNELGLETFYLRGSTKPQDRLTMANAFNEGEKDVFLISLKAGGTGLNLT-GADT 983 Query: 132 LVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQ 191 ++ + LWW+ +Q R + G K+ V V+ +IA+ T++E + + K + Sbjct: 984 VILYDLWWNPAVEEQAAGR-----AHRMGQKKVVEVWRMIAEGTVEEKMNSLQQEKRELF 1038 Query: 192 DLLLNA 197 ++ Sbjct: 1039 QKVIQG 1044 >gi|170754301|ref|YP_001781764.1| phage helicase [Clostridium botulinum B1 str. Okra] gi|169119513|gb|ACA43349.1| phage helicase [Clostridium botulinum B1 str. Okra] Length = 365 Score = 121 bits (303), Expect = 7e-26, Method: Composition-based stats. Identities = 36/202 (17%), Positives = 85/202 (42%), Gaps = 23/202 (11%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEV 61 K+Y KF+++ + + S +K + QLA+ + + K+ +L+ Sbjct: 182 KEYKKFKKDRLITINDTELVGDTSLTKMLYLRQLAS------------QYNPNKLSSLKD 229 Query: 62 IIEKANAAPIIVAYHFNSDLARLQ----KAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPA 117 ++E +I+ Y+F ++ +++ + ++ ++ + ++ Sbjct: 230 LLESTEDR-VIIFYNFTEEMEQIKEVCGRLEKPISIVNGQTKDLENYKTKDNTVVLVQYQ 288 Query: 118 SCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 + GLNLQ N ++++SL E +Q +R + G R +YLI + I+ Sbjct: 289 AGAMGLNLQLS-NKIIYYSLPLASELFEQSKKR-----THRIGQTRTCMYWYLITKGCIE 342 Query: 178 ELVLQRLRTKSTIQDLLLNALK 199 E + + L+ + + L L+ Sbjct: 343 EQIFETLKERRDYTNKLFEELE 364 >gi|315148655|gb|EFT92671.1| protein, SNF2 family [Enterococcus faecalis TX4244] Length = 1065 Score = 121 bits (303), Expect = 7e-26, Method: Composition-based stats. Identities = 37/186 (19%), Positives = 79/186 (42%), Gaps = 21/186 (11%) Query: 24 NSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDL 81 + + + Q+ + E+ K++ ++ + A N +++ F S L Sbjct: 868 SILAGLTRLRQICCDPRLFIEDYT---GGSGKVEQVKDFLVAAKENNRRVLLFSQFTSML 924 Query: 82 ARLQKA---------FPQGRTLDKDPCTIQE-WNEGKIPLLFAHPASCGHGLNLQYGGNI 131 + L+K + +G T +D T+ +NEG+ + + G GLNL G + Sbjct: 925 SILEKELNELGLETFYLRGSTKPQDRLTMANAFNEGEKDVFLISLKAGGTGLNLT-GADT 983 Query: 132 LVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQ 191 ++ + LWW+ +Q R + G K+ V V+ +IA+ T++E + + K + Sbjct: 984 VILYDLWWNPAVEEQAAGR-----AHRMGQKKVVEVWRMIAEGTVEEKMNSLQQEKRELF 1038 Query: 192 DLLLNA 197 ++ Sbjct: 1039 QKVIQG 1044 >gi|257420085|ref|ZP_05597079.1| conserved hypothetical protein [Enterococcus faecalis T11] gi|257161913|gb|EEU91873.1| conserved hypothetical protein [Enterococcus faecalis T11] Length = 1065 Score = 121 bits (303), Expect = 7e-26, Method: Composition-based stats. Identities = 37/186 (19%), Positives = 79/186 (42%), Gaps = 21/186 (11%) Query: 24 NSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDL 81 + + + Q+ + E+ K++ ++ + A N +++ F S L Sbjct: 868 SILAGLTRLRQICCDPRLFIEDYT---GGSGKVEQVKDFLVAAKENNRRVLLFSQFTSML 924 Query: 82 ARLQKA---------FPQGRTLDKDPCTIQE-WNEGKIPLLFAHPASCGHGLNLQYGGNI 131 + L+K + +G T +D T+ +NEG+ + + G GLNL G + Sbjct: 925 SILEKELNELGLETFYLRGSTKPQDRLTMANAFNEGEKDVFLISLKAGGTGLNLT-GADT 983 Query: 132 LVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQ 191 ++ + LWW+ +Q R + G K+ V V+ +IA+ T++E + + K + Sbjct: 984 VILYDLWWNPAVEEQAAGR-----AHRMGQKKVVEVWRMIAEGTVEEKMNSLQQEKRELF 1038 Query: 192 DLLLNA 197 ++ Sbjct: 1039 QKVIQG 1044 >gi|312866392|ref|ZP_07726610.1| SNF2 family N-terminal domain protein [Streptococcus downei F0415] gi|311098086|gb|EFQ56312.1| SNF2 family N-terminal domain protein [Streptococcus downei F0415] Length = 1036 Score = 121 bits (303), Expect = 7e-26, Method: Composition-based stats. Identities = 37/185 (20%), Positives = 67/185 (36%), Gaps = 24/185 (12%) Query: 26 ASKTVKCLQLA-NGAVYYDEEKHWKEVHDEKIKALEVIIEKAN--AAPIIVAYHFNSDLA 82 S + Q+ A++ D KI +L ++ + ++ F L Sbjct: 837 LSGITRLRQICDTPALFMDYGG-----SSGKIDSLHQLLSQIQESGHRTLIFSQFRQMLD 891 Query: 83 RLQKAFPQ----------GRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNIL 132 + Q + + +N G + + G GLNL G + + Sbjct: 892 IAEDLVAQLGMTSYKITGSTPAETRQEMTKAFNNGSKDVFLVSLKAGGVGLNLT-GADTV 950 Query: 133 VFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQD 192 + LWW+ Q I R + G K +V VY LI + TI+E +L+ +K + Sbjct: 951 ILIDLWWNPAVEMQAISR-----AHRLGQKESVEVYRLITRGTIEEKILELQDSKRNLVT 1005 Query: 193 LLLNA 197 +L+ Sbjct: 1006 TVLDG 1010 >gi|242012609|ref|XP_002427022.1| predicted protein [Pediculus humanus corporis] gi|212511267|gb|EEB14284.1| predicted protein [Pediculus humanus corporis] Length = 1570 Score = 121 bits (303), Expect = 7e-26, Method: Composition-based stats. Identities = 32/176 (18%), Positives = 71/176 (40%), Gaps = 21/176 (11%) Query: 44 EEKHWKEVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQKAF----------PQG 91 +K K+ L+ ++++ +++ + L++ Sbjct: 1127 PDKQTMVADAGKLYVLDGLLKRLKEGGHRVLIYSQMTRMIDLLEEYMWHRKHTYMRLDGS 1186 Query: 92 RTLDKDPCTIQEWNE-GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 + + + ++ I + + G G+NL + ++F+ W+ QQ ++R Sbjct: 1187 SKISERRDMVADFQSRADIFVFLLSTRAGGLGINLT-AADTVIFYDSDWNPTVDQQAMDR 1245 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA--LKKETIH 204 + G + V VY LI + TI+E +LQR R KS IQ ++++ K + + Sbjct: 1246 -----AHRLGQTKQVTVYRLICKGTIEERILQRAREKSEIQRMVISGGNFKPDHLK 1296 >gi|156405034|ref|XP_001640537.1| predicted protein [Nematostella vectensis] gi|156227672|gb|EDO48474.1| predicted protein [Nematostella vectensis] Length = 1429 Score = 121 bits (303), Expect = 7e-26, Method: Composition-based stats. Identities = 32/167 (19%), Positives = 67/167 (40%), Gaps = 19/167 (11%) Query: 44 EEKHWKEVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQKAFPQGRTL------- 94 ++ K+ L+ ++ K +++ + L++ + Sbjct: 977 PNRNSVISDSGKLTVLDGLLTKLKLQGHRVLIYSQMTRMIDILEEYMTFRKHKYMRLDGS 1036 Query: 95 ----DKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 D+ N I + + G G+NL + ++F+ W+ +Q ++R Sbjct: 1037 SKISDRRDMVADFQNNKDIFVFLLSTRAGGLGINLT-AADTVIFYDSDWNPTVDEQAMDR 1095 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + G + V VY L+ +NTI+E +LQR R KS IQ ++++ Sbjct: 1096 -----AHRLGQTKQVTVYRLVTKNTIEERILQRAREKSEIQKMVISG 1137 >gi|313890879|ref|ZP_07824503.1| SNF2 family N-terminal domain protein [Streptococcus pseudoporcinus SPIN 20026] gi|313120777|gb|EFR43892.1| SNF2 family N-terminal domain protein [Streptococcus pseudoporcinus SPIN 20026] Length = 1031 Score = 121 bits (303), Expect = 7e-26, Method: Composition-based stats. Identities = 37/184 (20%), Positives = 67/184 (36%), Gaps = 22/184 (11%) Query: 26 ASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLAR 83 S + Q+ + + E + K+++L ++ + N ++ F L Sbjct: 837 LSGITRLRQICDTPSLFME----YQGESGKLESLRTLLLQVKENGHRALIFSQFRGMLEI 892 Query: 84 LQKAFP----------QGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILV 133 +++ D+ + +N G + G GLNL G + +V Sbjct: 893 VEQELSSLGLGSYKITGSTPADERQEMTRAFNNGSKDAFLISLKAGGVGLNLT-GADTVV 951 Query: 134 FFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDL 193 LWW+ Q I R + G K V VY LI + TI+E +L K + Sbjct: 952 LIDLWWNPAVEMQAISR-----AHRIGQKDNVEVYRLITRGTIEEKILTLQENKKNLVTT 1006 Query: 194 LLNA 197 +L+ Sbjct: 1007 VLDG 1010 >gi|294140756|ref|YP_003556734.1| helicase, Snf2 family [Shewanella violacea DSS12] gi|293327225|dbj|BAJ01956.1| helicase, Snf2 family [Shewanella violacea DSS12] Length = 694 Score = 121 bits (303), Expect = 7e-26, Method: Composition-based stats. Identities = 28/147 (19%), Positives = 64/147 (43%), Gaps = 18/147 (12%) Query: 57 KALEVIIEKANAAPIIVAYHFNSDLARLQKAFP---------QGRTLDKDPCTIQEWNEG 107 L ++E+ +++ F S L + + G++ D+ ++ + + Sbjct: 530 DKLPGMLEE--GRRVLIFSSFTSMLTLIGELLENLGISFVELTGKSRDR-GALVKRFQQR 586 Query: 108 KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFV 167 ++P+ + G GLNL ++++ WW+ QQ +R + G ++VFV Sbjct: 587 EVPVFLISLKAGGAGLNLT-AADVVIHTDPWWNPAAEQQASDR-----AHRIGQDKSVFV 640 Query: 168 YYLIAQNTIDELVLQRLRTKSTIQDLL 194 Y LI + T++E + +K+ + + Sbjct: 641 YKLICKETVEERIQLLQESKNNLAQSI 667 >gi|291436286|ref|ZP_06575676.1| SNF2/RAD54 family helicase [Streptomyces ghanaensis ATCC 14672] gi|291339181|gb|EFE66137.1| SNF2/RAD54 family helicase [Streptomyces ghanaensis ATCC 14672] Length = 692 Score = 121 bits (303), Expect = 7e-26, Method: Composition-based stats. Identities = 35/214 (16%), Positives = 72/214 (33%), Gaps = 26/214 (12%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASK--TVKCLQLANGAVYYDEEKHWKEVHDEK---- 55 Y RE ++ Q+ + Y +E+H + Sbjct: 460 ALYEAVVRESLLAIESAQGMGRRGLVLKLLTSLKQICDHPALYLKEEHARAGGGRLAARS 519 Query: 56 ----IKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQ----------GRTLDKDPCTI 101 + + A +V + + + G + + + Sbjct: 520 GKLALLDELLDTLLAEDGSALVFTQYVGMARLITAHLAERAVPVDLLHGGTPVPERERMV 579 Query: 102 QEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGF 161 + G P+L + G GLNL G+ +V F WW+ +Q +R + G Sbjct: 580 DRFQSGATPVLVLSLKAAGTGLNLTRAGH-VVHFDRWWNPAVEEQATDR-----AYRIGQ 633 Query: 162 KRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 + V V+ LI + T+++ + + L++K + D +L Sbjct: 634 TQPVQVHRLITEGTVEDRIAEMLQSKRALADAIL 667 >gi|325113188|ref|YP_004277134.1| putative helicase [Acidiphilium multivorum AIU301] gi|325052655|dbj|BAJ82992.1| putative helicase [Acidiphilium multivorum AIU301] Length = 918 Score = 120 bits (302), Expect = 8e-26, Method: Composition-based stats. Identities = 42/212 (19%), Positives = 76/212 (35%), Gaps = 22/212 (10%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASK--TVKCLQLANGAVYYDEEKHWKEVHDEKIKAL 59 Y + +L L+ A V+ Q+ N ++ + +W E K + L Sbjct: 685 ALYSEAVGDLARSLEEAEGMARRGLVLASLVRLKQICNHPAHWLNDGNWDEAGSGKFRRL 744 Query: 60 EVIIEKANAA--PIIVAYHFNSDLARLQKAFP-----------QGRTLDKDPCTIQEWNE 106 I E A ++V F +A L G + + +Q + E Sbjct: 745 REIAEAVAARQDKMLVFTQFREMVAPLAALLASVFGRDGLELHGGTPVRQRRTLVQRFQE 804 Query: 107 GK-IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 + +P + G GL L + +V F WW+ Q +R + G K V Sbjct: 805 DEEVPFFVLSLKAGGTGLTLT-AASHVVHFDRWWNPAVEAQATDR-----AFRIGQKSNV 858 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 V+ I + T++E + + K ++ LL+ Sbjct: 859 LVHKFICRGTVEERIDAMIEAKQSLSTELLSG 890 >gi|239927952|ref|ZP_04684905.1| helicase [Streptomyces ghanaensis ATCC 14672] Length = 701 Score = 120 bits (302), Expect = 8e-26, Method: Composition-based stats. Identities = 35/214 (16%), Positives = 72/214 (33%), Gaps = 26/214 (12%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASK--TVKCLQLANGAVYYDEEKHWKEVHDEK---- 55 Y RE ++ Q+ + Y +E+H + Sbjct: 469 ALYEAVVRESLLAIESAQGMGRRGLVLKLLTSLKQICDHPALYLKEEHARAGGGRLAARS 528 Query: 56 ----IKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQ----------GRTLDKDPCTI 101 + + A +V + + + G + + + Sbjct: 529 GKLALLDELLDTLLAEDGSALVFTQYVGMARLITAHLAERAVPVDLLHGGTPVPERERMV 588 Query: 102 QEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGF 161 + G P+L + G GLNL G+ +V F WW+ +Q +R + G Sbjct: 589 DRFQSGATPVLVLSLKAAGTGLNLTRAGH-VVHFDRWWNPAVEEQATDR-----AYRIGQ 642 Query: 162 KRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 + V V+ LI + T+++ + + L++K + D +L Sbjct: 643 TQPVQVHRLITEGTVEDRIAEMLQSKRALADAIL 676 >gi|297748685|gb|ADI51231.1| SWF/SNF family helicase [Chlamydia trachomatis D-EC] gi|297749565|gb|ADI52243.1| SWF/SNF family helicase [Chlamydia trachomatis D-LC] Length = 1202 Score = 120 bits (302), Expect = 9e-26, Method: Composition-based stats. Identities = 38/217 (17%), Positives = 90/217 (41%), Gaps = 24/217 (11%) Query: 7 FQRELYC--DLQGENIEAF----NSASKTVKCLQLANG-AVYYDEEKHWKEVHDEKIKAL 59 ++E L+ E A + + + Q+ + AVY+ + + +K K A Sbjct: 963 LKKEKCQIQQLEKEEDPASVNYLHVFALLNQLKQICDHPAVYFKDPESYKNHSSGKWAAF 1022 Query: 60 EVIIEK--ANAAPIIVAYHFNSDL---------ARLQKAFPQGRTLDKDPCTIQEWNEGK 108 ++ A+ ++V + + ++ A QG++ ++ + N+ Sbjct: 1023 VKLLNDSLASGYKVVVFSQYIQMIRIIALYLEEHAIEYALVQGKSQNRKEEIDRFSNDPN 1082 Query: 109 IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVY 168 + + G G+NL GN+++ + WW+ + Q ++R+ + G K VF+Y Sbjct: 1083 CRVFIGSLLAAGTGINLT-AGNVVIMYDRWWNPAKENQALDRV-----HRIGQKNTVFIY 1136 Query: 169 YLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIHV 205 L+ ++T++E + + K + + + +HV Sbjct: 1137 KLVTEDTLEEHIHYLIEKKMRLLNQVTTTQDSNILHV 1173 >gi|289525600|emb|CBJ15078.1| putative helicase (SWF/SNF family) [Chlamydia trachomatis Sweden2] gi|296435160|gb|ADH17338.1| SWI/SNF family helicase [Chlamydia trachomatis E/150] gi|296438880|gb|ADH21033.1| SWI/SNF family helicase [Chlamydia trachomatis E/11023] Length = 1199 Score = 120 bits (302), Expect = 9e-26, Method: Composition-based stats. Identities = 38/217 (17%), Positives = 90/217 (41%), Gaps = 24/217 (11%) Query: 7 FQRELYC--DLQGENIEAF----NSASKTVKCLQLANG-AVYYDEEKHWKEVHDEKIKAL 59 ++E L+ E A + + + Q+ + AVY+ + + +K K A Sbjct: 960 LKKEKCQIQQLEKEEDPASVNYLHVFALLNQLKQICDHPAVYFKDPESYKNHSSGKWAAF 1019 Query: 60 EVIIEK--ANAAPIIVAYHFNSDL---------ARLQKAFPQGRTLDKDPCTIQEWNEGK 108 ++ A+ ++V + + ++ A QG++ ++ + N+ Sbjct: 1020 VKLLNDSLASGYKVVVFSQYIQMIRIIALYLEEHAIEYALVQGKSQNRKEEIDRFSNDPN 1079 Query: 109 IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVY 168 + + G G+NL GN+++ + WW+ + Q ++R+ + G K VF+Y Sbjct: 1080 CRVFIGSLLAAGTGINLT-AGNVVIMYDRWWNPAKENQALDRV-----HRIGQKNTVFIY 1133 Query: 169 YLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIHV 205 L+ ++T++E + + K + + + +HV Sbjct: 1134 KLVTEDTLEEHIHYLIEKKMRLLNQVTTTQDSNILHV 1170 >gi|255507152|ref|ZP_05382791.1| SWI/SNF family helicase [Chlamydia trachomatis D(s)2923] Length = 1199 Score = 120 bits (302), Expect = 9e-26, Method: Composition-based stats. Identities = 38/217 (17%), Positives = 90/217 (41%), Gaps = 24/217 (11%) Query: 7 FQRELYC--DLQGENIEAF----NSASKTVKCLQLANG-AVYYDEEKHWKEVHDEKIKAL 59 ++E L+ E A + + + Q+ + AVY+ + + +K K A Sbjct: 960 LKKEKCQIQQLEKEEDPASVNYLHVFALLNQLKQICDHPAVYFKDPESYKNHSSGKWAAF 1019 Query: 60 EVIIEK--ANAAPIIVAYHFNSDL---------ARLQKAFPQGRTLDKDPCTIQEWNEGK 108 ++ A+ ++V + + ++ A QG++ ++ + N+ Sbjct: 1020 VKLLNDSLASGYKVVVFSQYIQMIRIIALYLEEHAIEYALVQGKSQNRKEEIDRFSNDPN 1079 Query: 109 IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVY 168 + + G G+NL GN+++ + WW+ + Q ++R+ + G K VF+Y Sbjct: 1080 CRVFIGSLLAAGTGINLT-AGNVVIMYDRWWNPAKENQALDRV-----HRIGQKNTVFIY 1133 Query: 169 YLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIHV 205 L+ ++T++E + + K + + + +HV Sbjct: 1134 KLVTEDTLEEHIHYLIEKKMRLLNQVTTTQDSNILHV 1170 >gi|255348934|ref|ZP_05380941.1| SWI/SNF family helicase [Chlamydia trachomatis 70] gi|255503474|ref|ZP_05381864.1| SWI/SNF family helicase [Chlamydia trachomatis 70s] Length = 1199 Score = 120 bits (302), Expect = 9e-26, Method: Composition-based stats. Identities = 38/217 (17%), Positives = 90/217 (41%), Gaps = 24/217 (11%) Query: 7 FQRELYC--DLQGENIEAF----NSASKTVKCLQLANG-AVYYDEEKHWKEVHDEKIKAL 59 ++E L+ E A + + + Q+ + AVY+ + + +K K A Sbjct: 960 LKKEKCQIQQLEKEEDPASVNYLHVFALLNQLKQICDHPAVYFKDPESYKNHSSGKWAAF 1019 Query: 60 EVIIEK--ANAAPIIVAYHFNSDL---------ARLQKAFPQGRTLDKDPCTIQEWNEGK 108 ++ A+ ++V + + ++ A QG++ ++ + N+ Sbjct: 1020 VKLLNDSLASGYKVVVFSQYIQMIRIIALYLEEHAIEYALVQGKSQNRKEEIDRFSNDPN 1079 Query: 109 IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVY 168 + + G G+NL GN+++ + WW+ + Q ++R+ + G K VF+Y Sbjct: 1080 CRVFIGSLLAAGTGINLT-AGNVVIMYDRWWNPAKENQALDRV-----HRIGQKNTVFIY 1133 Query: 169 YLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIHV 205 L+ ++T++E + + K + + + +HV Sbjct: 1134 KLVTEDTLEEHIHYLIEKKMRLLNQVTTTQDSNILHV 1170 >gi|15605284|ref|NP_220070.1| SWI/SNF family helicase [Chlamydia trachomatis D/UW-3/CX] gi|3328995|gb|AAC68157.1| SWI/SNF family helicase [Chlamydia trachomatis D/UW-3/CX] gi|296437016|gb|ADH19186.1| SWI/SNF family helicase [Chlamydia trachomatis G/11222] Length = 1199 Score = 120 bits (302), Expect = 9e-26, Method: Composition-based stats. Identities = 38/217 (17%), Positives = 90/217 (41%), Gaps = 24/217 (11%) Query: 7 FQRELYC--DLQGENIEAF----NSASKTVKCLQLANG-AVYYDEEKHWKEVHDEKIKAL 59 ++E L+ E A + + + Q+ + AVY+ + + +K K A Sbjct: 960 LKKEKCQIQQLEKEEDPASVNYLHVFALLNQLKQICDHPAVYFKDPESYKNHSSGKWAAF 1019 Query: 60 EVIIEK--ANAAPIIVAYHFNSDL---------ARLQKAFPQGRTLDKDPCTIQEWNEGK 108 ++ A+ ++V + + ++ A QG++ ++ + N+ Sbjct: 1020 VKLLNDSLASGYKVVVFSQYIQMIRIIALYLEEHAIEYALVQGKSQNRKEEIDRFSNDPN 1079 Query: 109 IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVY 168 + + G G+NL GN+++ + WW+ + Q ++R+ + G K VF+Y Sbjct: 1080 CRVFIGSLLAAGTGINLT-AGNVVIMYDRWWNPAKENQALDRV-----HRIGQKNTVFIY 1133 Query: 169 YLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIHV 205 L+ ++T++E + + K + + + +HV Sbjct: 1134 KLVTEDTLEEHIHYLIEKKMRLLNQVTTTQDSNILHV 1170 >gi|195062800|ref|XP_001996256.1| GH22391 [Drosophila grimshawi] gi|193899751|gb|EDV98617.1| GH22391 [Drosophila grimshawi] Length = 1659 Score = 120 bits (302), Expect = 9e-26, Method: Composition-based stats. Identities = 41/223 (18%), Positives = 83/223 (37%), Gaps = 33/223 (14%) Query: 9 RELYCDLQGENIEAFN------------SASKTVKCLQLANGAVYYDEEKHWKEVHDEKI 56 R LYC+ +G A+ C + + +K K+ Sbjct: 1119 RHLYCESRGAAWTQIRHVQCENIVGRELVATGLALCRPRSGWSSIVVPDKETLITDAGKL 1178 Query: 57 KALEVIIEK--ANAAPIIVAYHFNSDLARLQKAF----------PQGRTLDKDPCTIQEW 104 L+ ++ + A +++ + L++ + + ++ Sbjct: 1179 SVLDGLLTRLKAEGHRVLIYSQMTKMIDLLEEYMWHRKHRYMRLDGSSKISARRDMVADF 1238 Query: 105 N-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKR 163 I + + G G+NL + ++F+ W+ QQ ++R + G + Sbjct: 1239 QTRADIFVFLLSTRAGGLGINLT-AADTVIFYDSDWNPTVDQQAMDR-----AHRLGQTK 1292 Query: 164 AVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA--LKKETIH 204 V VY LI + TI+E +LQR R KS IQ ++++ K +T+ Sbjct: 1293 QVTVYRLICKGTIEERILQRAREKSEIQRMVISGGNFKPDTLK 1335 >gi|125543874|gb|EAY90013.1| hypothetical protein OsI_11583 [Oryza sativa Indica Group] Length = 1411 Score = 120 bits (302), Expect = 9e-26, Method: Composition-based stats. Identities = 31/160 (19%), Positives = 71/160 (44%), Gaps = 19/160 (11%) Query: 51 VHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAF----------PQGRTLDKDP 98 K++ L++++ + A +++ L L+ + Sbjct: 1090 TDSGKLQTLDILLRRLRAENHRVLLFAQMTKMLDILEDYMNFRKFKYFRLDGSSAISDRR 1149 Query: 99 CTIQEW-NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 ++++ N I + + G G+NL + ++F+ + W+ + QQ ++R Sbjct: 1150 DMVRDFQNRNDIFVFLLSTRAGGLGINLT-AADTVIFYEIDWNPTQDQQAMDR-----TH 1203 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + G + V VY LI ++TI+E +LQR + K+ +Q+L++ Sbjct: 1204 RLGQTKEVTVYRLICKDTIEEKILQRAKQKNAVQELVMKG 1243 >gi|270285639|ref|ZP_06195033.1| SNF2 family helicase [Chlamydia muridarum Nigg] gi|270289648|ref|ZP_06195950.1| SNF2 family helicase [Chlamydia muridarum Weiss] gi|301337035|ref|ZP_07225237.1| SNF2 family helicase [Chlamydia muridarum MopnTet14] Length = 1199 Score = 120 bits (302), Expect = 9e-26, Method: Composition-based stats. Identities = 38/217 (17%), Positives = 91/217 (41%), Gaps = 24/217 (11%) Query: 7 FQRELYC--DLQGENIEAF----NSASKTVKCLQLANG-AVYYDEEKHWKEVHDEKIKAL 59 ++E L+ E+ A + + + Q+ + A+Y+ + + +K K A Sbjct: 960 LKKEKCQIQQLEKEDDPAAVNYLHVFALLNQLKQICDHPAIYFKDPESYKNYASGKWAAF 1019 Query: 60 EVIIEK--ANAAPIIVAYHFNSDLARL---------QKAFPQGRTLDKDPCTIQEWNEGK 108 ++ A+ ++V + + + Q A QG++ ++ + N+ Sbjct: 1020 VKLLNDSLASGYKVVVFSQYIQMIRIISLYLEEQNIQYALVQGKSQNRKEEIDRFSNDPN 1079 Query: 109 IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVY 168 + + G G+NL GN+++ + WW+ + Q ++R+ + G K VF+Y Sbjct: 1080 CRVFIGSLLAAGTGINLT-AGNVVIMYDRWWNPAKENQALDRV-----HRIGQKNTVFIY 1133 Query: 169 YLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIHV 205 L+ ++T++E + + K + + + +HV Sbjct: 1134 KLVTEDTLEEHIHYLIEKKMRLLNQVTTTQDSNILHV 1170 >gi|15835457|ref|NP_297216.1| SNF2 family helicase [Chlamydia muridarum Nigg] gi|8163332|gb|AAF73609.1| helicase, Snf2 family [Chlamydia muridarum Nigg] Length = 1202 Score = 120 bits (302), Expect = 9e-26, Method: Composition-based stats. Identities = 38/217 (17%), Positives = 91/217 (41%), Gaps = 24/217 (11%) Query: 7 FQRELYC--DLQGENIEAF----NSASKTVKCLQLANG-AVYYDEEKHWKEVHDEKIKAL 59 ++E L+ E+ A + + + Q+ + A+Y+ + + +K K A Sbjct: 963 LKKEKCQIQQLEKEDDPAAVNYLHVFALLNQLKQICDHPAIYFKDPESYKNYASGKWAAF 1022 Query: 60 EVIIEK--ANAAPIIVAYHFNSDLARL---------QKAFPQGRTLDKDPCTIQEWNEGK 108 ++ A+ ++V + + + Q A QG++ ++ + N+ Sbjct: 1023 VKLLNDSLASGYKVVVFSQYIQMIRIISLYLEEQNIQYALVQGKSQNRKEEIDRFSNDPN 1082 Query: 109 IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVY 168 + + G G+NL GN+++ + WW+ + Q ++R+ + G K VF+Y Sbjct: 1083 CRVFIGSLLAAGTGINLT-AGNVVIMYDRWWNPAKENQALDRV-----HRIGQKNTVFIY 1136 Query: 169 YLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIHV 205 L+ ++T++E + + K + + + +HV Sbjct: 1137 KLVTEDTLEEHIHYLIEKKMRLLNQVTTTQDSNILHV 1173 >gi|229099671|ref|ZP_04230598.1| Helicase, SNF2/RAD54 [Bacillus cereus Rock3-29] gi|228683741|gb|EEL37692.1| Helicase, SNF2/RAD54 [Bacillus cereus Rock3-29] Length = 855 Score = 120 bits (302), Expect = 9e-26, Method: Composition-based stats. Identities = 40/212 (18%), Positives = 81/212 (38%), Gaps = 23/212 (10%) Query: 3 QYHKFQRELYCDLQG-ENIEAFN-SASKTVKCLQLANGAVYYDEEKHWKEVHDE--KIKA 58 Y + ++ +++G IE K Q+ N Y +E K++ + K K Sbjct: 632 LYEQLVQDTLQNVEGLSGIERRGFILLMLNKLKQICNHPALYLKETEPKDIVERSMKTKT 691 Query: 59 LEVIIE--KANAAPIIVAYHFNSDLARLQKAFPQ-----------GRTLDKDPCTIQEWN 105 + +IE K ++ + S L+ + + I+++ Sbjct: 692 VMELIENIKDQNESCLIFTQYISMGNMLKSILEETFGQRVLFLNGSVPKKERDKMIEQFQ 751 Query: 106 EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 G + + G GLNL N ++ + WW+ Q +R + G KR V Sbjct: 752 NGTYDIFILSLKAGGTGLNLT-AANHVIHYDRWWNPAVENQATDR-----AYRIGQKRFV 805 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 V+ LI T++E + + L K ++ + ++ + Sbjct: 806 HVHKLITTGTLEEKIDEMLERKQSLNNAVITS 837 >gi|206602042|gb|EDZ38524.1| Putative helicase, Snf2 family [Leptospirillum sp. Group II '5-way CG'] Length = 1049 Score = 120 bits (302), Expect = 1e-25, Method: Composition-based stats. Identities = 33/167 (19%), Positives = 65/167 (38%), Gaps = 20/167 (11%) Query: 43 DEEKHWKEVHDEKIKALEVIIEK-ANAAPIIVAYHFNSDLARLQKAFPQGRTL------- 94 + + + ++ L I E A+ I++ F L L+ A + L Sbjct: 862 NPKGISVPAPAKFLETLAKIREALADGHRILLFSQFTGMLDILENALLKDGILFSRLDGK 921 Query: 95 ---DKDPCTIQEWNE---GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMI 148 + ++E+ G + + + G GL L + + + WW+ + Q Sbjct: 922 TPLKERQRLVEEFQRQKPGSPSVFLSSLKAGGVGLTLTN-ADFVFHYDPWWNPQVENQAT 980 Query: 149 ERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 +R + G KR VFVY ++ + T++E V K + DL++ Sbjct: 981 DR-----SHRIGQKRPVFVYRMLTRGTVEEKVKALKEEKLELFDLVM 1022 >gi|124515798|gb|EAY57307.1| putative helicase, Snf2 family [Leptospirillum rubarum] Length = 1049 Score = 120 bits (302), Expect = 1e-25, Method: Composition-based stats. Identities = 33/167 (19%), Positives = 65/167 (38%), Gaps = 20/167 (11%) Query: 43 DEEKHWKEVHDEKIKALEVIIEK-ANAAPIIVAYHFNSDLARLQKAFPQGRTL------- 94 + + + ++ L I E A+ I++ F L L+ A + L Sbjct: 862 NPKGISVPAPAKFLETLAKIREALADGHRILLFSQFTGMLDILENALLKDGILFSRLDGK 921 Query: 95 ---DKDPCTIQEWNE---GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMI 148 + ++E+ G + + + G GL L + + + WW+ + Q Sbjct: 922 TPLKERQRLVEEFQRQKPGSPSVFLSSLKAGGVGLTLTN-ADFVFHYDPWWNPQVENQAT 980 Query: 149 ERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 +R + G KR VFVY ++ + T++E V K + DL++ Sbjct: 981 DR-----SHRIGQKRPVFVYRMLTRGTVEEKVKALKEEKLELFDLVM 1022 >gi|292492078|ref|YP_003527517.1| SNF2-related protein [Nitrosococcus halophilus Nc4] gi|291580673|gb|ADE15130.1| SNF2-related protein [Nitrosococcus halophilus Nc4] Length = 1042 Score = 120 bits (302), Expect = 1e-25, Method: Composition-based stats. Identities = 35/206 (16%), Positives = 77/206 (37%), Gaps = 23/206 (11%) Query: 6 KFQRELYCDLQGENIEAFNSASKTVKCLQLANG-AVYYDEEKHWKEVHDEKIKALEVIIE 64 + ++ + +G + S ++ Q+ N A + + + E K++ + ++E Sbjct: 816 QKVKDSLAETEGIQRKGL-ILSTLMRLKQICNHPAQFLQDGSEFSEGRSHKLERVAQMVE 874 Query: 65 K--ANAAPIIVAYHFNSDLARLQKAFP-----------QGRTLDKDPCTIQEWNEGKI-- 109 + A +++ F L+K F G + I E+ + Sbjct: 875 EVMAEGEGLLLFTQFTEIGQALEKRFQHHYHYPTYYLHGGTARRRRERMIAEFQDPDTGP 934 Query: 110 PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYY 169 + + G G+NL N + F WW+ Q +R + G + VFV+ Sbjct: 935 AVFILSLKAGGVGINLTR-ANHVFHFDRWWNPAVENQATDR-----AYRIGQTKQVFVHK 988 Query: 170 LIAQNTIDELVLQRLRTKSTIQDLLL 195 ++ T++E + Q L K + ++ Sbjct: 989 MVTLGTLEERIDQMLEEKQRLAGSIV 1014 >gi|229118736|ref|ZP_04248087.1| Helicase, SNF2/RAD54 [Bacillus cereus Rock1-3] gi|228664704|gb|EEL20195.1| Helicase, SNF2/RAD54 [Bacillus cereus Rock1-3] Length = 855 Score = 120 bits (302), Expect = 1e-25, Method: Composition-based stats. Identities = 40/212 (18%), Positives = 81/212 (38%), Gaps = 23/212 (10%) Query: 3 QYHKFQRELYCDLQG-ENIEAFN-SASKTVKCLQLANGAVYYDEEKHWKEVHDE--KIKA 58 Y + ++ +++G IE K Q+ N Y +E K++ + K K Sbjct: 632 LYEQLVQDTLQNVEGLSGIERRGFILLMLNKLKQICNHPALYLKETEPKDIVERSMKTKT 691 Query: 59 LEVIIE--KANAAPIIVAYHFNSDLARLQKAFPQ-----------GRTLDKDPCTIQEWN 105 + +IE K ++ + S L+ + + I+++ Sbjct: 692 VMELIENIKDQNESCLIFTQYISMGNMLKSILEETFGQRVLFLNGSVPKKERDKMIEQFQ 751 Query: 106 EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 G + + G GLNL N ++ + WW+ Q +R + G KR V Sbjct: 752 NGTYDIFILSLKAGGTGLNLT-AANHVIHYDRWWNPAVENQATDR-----AYRIGQKRFV 805 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 V+ LI T++E + + L K ++ + ++ + Sbjct: 806 HVHKLITTGTLEEKIDEMLERKQSLNNAVITS 837 >gi|198455503|ref|XP_001360023.2| GA16098 [Drosophila pseudoobscura pseudoobscura] gi|198133273|gb|EAL29175.2| GA16098 [Drosophila pseudoobscura pseudoobscura] Length = 1662 Score = 120 bits (301), Expect = 1e-25, Method: Composition-based stats. Identities = 34/176 (19%), Positives = 71/176 (40%), Gaps = 21/176 (11%) Query: 44 EEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAF----------PQG 91 +K K+ L+ ++ + A +++ + L++ Sbjct: 1155 PDKETLITDAGKLFVLDTLLTRLKAEGHRVLIYSQMTKMIDLLEEYMWHRKHRYMRLDGS 1214 Query: 92 RTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 + + ++ I + + G G+NL + ++F+ W+ QQ ++R Sbjct: 1215 SKISARRDMVADFQTRADIFVFLLSTRAGGLGINLT-AADTVIFYDSDWNPTVDQQAMDR 1273 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA--LKKETIH 204 + G + V VY LI + TI+E +LQR R KS IQ ++++ K +T+ Sbjct: 1274 -----AHRLGQTKQVTVYRLICKGTIEERILQRAREKSEIQRMVISGGNFKPDTLK 1324 >gi|258514714|ref|YP_003190936.1| SNF2-related protein [Desulfotomaculum acetoxidans DSM 771] gi|257778419|gb|ACV62313.1| SNF2-related protein [Desulfotomaculum acetoxidans DSM 771] Length = 891 Score = 120 bits (301), Expect = 1e-25, Method: Composition-based stats. Identities = 39/187 (20%), Positives = 72/187 (38%), Gaps = 19/187 (10%) Query: 21 EAFNSASKTVKCLQLANGAVYYDEEKHWKE-VHDEKIKALEVIIEK--ANAAPIIVAYHF 77 +A + Q+ +W K ++ I++ AN ++V F Sbjct: 692 DASTVLEGLLYLRQVCCHPALLKRTLNWNHCDESGKFDLFKLKIDELQANHEKVVVFSQF 751 Query: 78 NSDLARLQK---------AFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYG 128 S L+ ++K + G T+ + + + + F + G GLN+ Sbjct: 752 TSMLSIMKKWAEEQGYATFYLDGATMKRQE-VVDSFERSDEGVFFISLKAGGVGLNI-VS 809 Query: 129 GNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKS 188 + + WW+ Q +RI + G K+ VFVY+L+ N+I+E + + K Sbjct: 810 CQYAIIYDPWWNPAVENQASDRI-----YRIGQKKNVFVYHLVTANSIEEKIEKLKTEKR 864 Query: 189 TIQDLLL 195 I D LL Sbjct: 865 EIADNLL 871 >gi|229076456|ref|ZP_04209418.1| Helicase, SNF2/RAD54 [Bacillus cereus Rock4-18] gi|228706642|gb|EEL58853.1| Helicase, SNF2/RAD54 [Bacillus cereus Rock4-18] Length = 855 Score = 120 bits (301), Expect = 1e-25, Method: Composition-based stats. Identities = 40/212 (18%), Positives = 81/212 (38%), Gaps = 23/212 (10%) Query: 3 QYHKFQRELYCDLQG-ENIEAFN-SASKTVKCLQLANGAVYYDEEKHWKEVHDE--KIKA 58 Y + ++ +++G IE K Q+ N Y +E K++ + K K Sbjct: 632 LYEQLVQDTLQNVEGLSGIERRGFILLMLNKLKQICNHPALYLKETEPKDIVERSMKTKT 691 Query: 59 LEVIIE--KANAAPIIVAYHFNSDLARLQKAFPQ-----------GRTLDKDPCTIQEWN 105 + +IE K ++ + S L+ + + I+++ Sbjct: 692 VMELIENIKDQNESCLIFTQYISMGNMLKSILEETFGQRVLFLNGSVPKKERDKMIEQFQ 751 Query: 106 EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 G + + G GLNL N ++ + WW+ Q +R + G KR V Sbjct: 752 NGTYDIFILSLKAGGTGLNLT-AANHVIHYDRWWNPAVENQATDR-----AYRIGQKRFV 805 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 V+ LI T++E + + L K ++ + ++ + Sbjct: 806 HVHKLITTGTLEEKIDEMLERKQSLNNAVITS 837 >gi|229105848|ref|ZP_04236475.1| Helicase, SNF2/RAD54 [Bacillus cereus Rock3-28] gi|228677569|gb|EEL31819.1| Helicase, SNF2/RAD54 [Bacillus cereus Rock3-28] Length = 855 Score = 120 bits (301), Expect = 1e-25, Method: Composition-based stats. Identities = 40/212 (18%), Positives = 81/212 (38%), Gaps = 23/212 (10%) Query: 3 QYHKFQRELYCDLQG-ENIEAFN-SASKTVKCLQLANGAVYYDEEKHWKEVHDE--KIKA 58 Y + ++ +++G IE K Q+ N Y +E K++ + K K Sbjct: 632 LYEQLVQDTLQNVEGLSGIERRGFILLMLNKLKQICNHPALYLKETEPKDIVERSMKTKT 691 Query: 59 LEVIIE--KANAAPIIVAYHFNSDLARLQKAFPQ-----------GRTLDKDPCTIQEWN 105 + +IE K ++ + S L+ + + I+++ Sbjct: 692 VMELIENIKDQNESCLIFTQYISMGNMLKSILEETFGQRVLFLNGSVPKKERDKMIEQFQ 751 Query: 106 EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 G + + G GLNL N ++ + WW+ Q +R + G KR V Sbjct: 752 NGTYDIFILSLKAGGTGLNLT-AANHVIHYDRWWNPAVENQATDR-----AYRIGQKRFV 805 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 V+ LI T++E + + L K ++ + ++ + Sbjct: 806 HVHKLITTGTLEEKIDEMLERKQSLNNAVITS 837 >gi|289570215|ref|ZP_06450442.1| predicted protein [Mycobacterium tuberculosis T17] gi|289543969|gb|EFD47617.1| predicted protein [Mycobacterium tuberculosis T17] Length = 517 Score = 120 bits (301), Expect = 1e-25, Method: Composition-based stats. Identities = 36/210 (17%), Positives = 66/210 (31%), Gaps = 25/210 (11%) Query: 3 QYHKFQRELYCDLQGEN--IEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 Y ++ ++ N + K Q+ N ++ K+ LE Sbjct: 288 LYQAVVADMMEKIENTEGIERRGNVLAAMAKLKQVCNHPAQLLHDRSPVGRRSGKVIRLE 347 Query: 61 VIIEKANAAPIIVAYHFNSDLARLQKAFP--------------QGRTLDKDPCTIQEWNE 106 I+ A ++ F L G + + + Sbjct: 348 EIL--AEGDRVLCFTQFTEFAELLVPHLAARFGRAARDIAYLHGGTPRKRRDEMVARFQS 405 Query: 107 GK-IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 G P+ + G GLNL N +V WW+ Q +R + G +R V Sbjct: 406 GDGPPIFLLSLKAGGTGLNLT-AANHVVHLDRWWNPAVENQATDR-----AFRIGQRRTV 459 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 V I T++E + + + K + DL++ Sbjct: 460 QVRKFICTGTLEEKIDEMIEEKKALADLVV 489 >gi|170070470|ref|XP_001869591.1| helicase [Culex quinquefasciatus] gi|167866368|gb|EDS29751.1| helicase [Culex quinquefasciatus] Length = 1569 Score = 120 bits (301), Expect = 1e-25, Method: Composition-based stats. Identities = 40/223 (17%), Positives = 87/223 (39%), Gaps = 26/223 (11%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQL-----ANGAVYYDEEKHWKEVHDEKI 56 K Y K +R + ++ E+ + + + L+L + +K K+ Sbjct: 1119 KFYCKSRRAAWAAIRHAQCESPDGFALVLDALKLSYTSSVGWSKIVIPDKQTLVSDAGKL 1178 Query: 57 KALEVIIEKA--NAAPIIVAYHFNSDLARLQKAF----------PQGRTLDKDPCTIQEW 104 L+ ++ + +++ + L++ + + ++ Sbjct: 1179 AVLDSLLTRLKTQGHRVLIYSQMTKMIDLLEEYMWHRKHRYMRLDGSSKISARRDMVADF 1238 Query: 105 NEG-KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKR 163 I + + G G+NL + ++F+ W+ QQ ++R + G + Sbjct: 1239 QSRTDIFVFLLSTRAGGLGINLT-AADTVIFYDSDWNPTVDQQAMDR-----AHRLGQTK 1292 Query: 164 AVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA--LKKETIH 204 V VY LI + TI+E +LQR R KS IQ ++++ K +T+ Sbjct: 1293 QVTVYRLICKGTIEERILQRAREKSEIQRMVISGGNFKPDTLK 1335 >gi|157132188|ref|XP_001662505.1| helicase [Aedes aegypti] gi|108871256|gb|EAT35481.1| helicase [Aedes aegypti] Length = 1372 Score = 120 bits (301), Expect = 1e-25, Method: Composition-based stats. Identities = 35/176 (19%), Positives = 72/176 (40%), Gaps = 21/176 (11%) Query: 44 EEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAF----------PQG 91 +K K+ L+ ++ + A +++ + L++ Sbjct: 1113 PDKQTLVSDAGKLAVLDSLLTRLKAQGHRVLIYSQMTKMIDLLEEYMWHRKHRYMRLDGS 1172 Query: 92 RTLDKDPCTIQEW-NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 + + ++ N I + + G G+NL + ++F+ W+ QQ ++R Sbjct: 1173 SKISARRDMVADFQNRADIFVFLLSTRAGGLGINLT-AADTVIFYDSDWNPTVDQQAMDR 1231 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA--LKKETIH 204 + G + V VY LI + TI+E +LQR R KS IQ ++++ K +T+ Sbjct: 1232 -----AHRLGQTKQVTVYRLICKGTIEERILQRAREKSEIQRMVISGGNFKPDTLK 1282 >gi|21227581|ref|NP_633503.1| SWF/SNF family helicase [Methanosarcina mazei Go1] gi|20905965|gb|AAM31175.1| SWF/SNF family helicase [Methanosarcina mazei Go1] Length = 1089 Score = 120 bits (301), Expect = 1e-25, Method: Composition-based stats. Identities = 45/224 (20%), Positives = 81/224 (36%), Gaps = 35/224 (15%) Query: 1 MKQYHKFQRE---LYCDLQGENIEAFNSA-----------SKTVKCLQLANGAVYYDEEK 46 MK Y +E LY + + EA A S + Q+ N + ++ Sbjct: 844 MKTYCTLTKEQASLYAAVLEDIREAIEGAEEGIQRKGIILSALSRLKQVCNHPAQFLKDN 903 Query: 47 HWKEVHDEKIKALEVIIEK--ANAAPIIVAYHF----NSDLARLQKAFP-------QGRT 93 K+ L +++ N +V F LQ +F G Sbjct: 904 STIPGRSGKLARLTEMLDVVLENGEKALVFTQFAEMGKMVKEHLQASFGCEVLFLHGGVP 963 Query: 94 LDKDPCTIQEWNEGK--IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERI 151 + ++ + EGK +P+ + G GLNL G N + F WW+ Q +R Sbjct: 964 RKQRDRMLERFQEGKEYLPIFVLSLKAGGTGLNLT-GANHVFHFDRWWNPAVENQATDR- 1021 Query: 152 GVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 + G K+ V V+ I T++E + + + K + + ++ Sbjct: 1022 ----AFRIGQKKNVEVHKFICAGTLEEKIDEIIERKVQVAENVV 1061 >gi|301059981|ref|ZP_07200855.1| SNF2 family N-terminal domain protein [delta proteobacterium NaphS2] gi|300445860|gb|EFK09751.1| SNF2 family N-terminal domain protein [delta proteobacterium NaphS2] Length = 1002 Score = 120 bits (301), Expect = 1e-25, Method: Composition-based stats. Identities = 31/183 (16%), Positives = 77/183 (42%), Gaps = 20/183 (10%) Query: 27 SKTVKCLQLANGAVYYDEE-KHWKEVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLAR 83 S Q+ N + ++ K + ++E+A + +++ F + + Sbjct: 790 SLLNLLKQICNHPALINGNIDDYQNFQSGKWDLFKELLEEALASGQKVVIYSQFLNMIDI 849 Query: 84 LQKAFPQ---------GRTLDKDPCTIQEWNEG-KIPLLFAHPASCGHGLNLQYGGNILV 133 ++K Q GRT ++ I+ +NE + + + G G++L ++++ Sbjct: 850 MEKYLAQTGTNFVSLTGRTTNR-EKIIERFNEDSECRVFVGSLKAGGVGIDL-VAASVVI 907 Query: 134 FFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDL 193 + WW+ + Q +R+ + G K+ V V+ L+ + T++E + + K + D Sbjct: 908 HYDRWWNAAKEDQATDRV-----HRIGQKKGVQVFKLVTEGTLEEKIAAIIAKKRNLMDS 962 Query: 194 LLN 196 ++ Sbjct: 963 VVE 965 >gi|219558075|ref|ZP_03537151.1| Snf2/Rad54 family helicase [Mycobacterium tuberculosis T17] Length = 527 Score = 120 bits (301), Expect = 1e-25, Method: Composition-based stats. Identities = 36/210 (17%), Positives = 66/210 (31%), Gaps = 25/210 (11%) Query: 3 QYHKFQRELYCDLQGEN--IEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 Y ++ ++ N + K Q+ N ++ K+ LE Sbjct: 298 LYQAVVADMMEKIENTEGIERRGNVLAAMAKLKQVCNHPAQLLHDRSPVGRRSGKVIRLE 357 Query: 61 VIIEKANAAPIIVAYHFNSDLARLQKAFP--------------QGRTLDKDPCTIQEWNE 106 I+ A ++ F L G + + + Sbjct: 358 EIL--AEGDRVLCFTQFTEFAELLVPHLAARFGRAARDIAYLHGGTPRKRRDEMVARFQS 415 Query: 107 GK-IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 G P+ + G GLNL N +V WW+ Q +R + G +R V Sbjct: 416 GDGPPIFLLSLKAGGTGLNLT-AANHVVHLDRWWNPAVENQATDR-----AFRIGQRRTV 469 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 V I T++E + + + K + DL++ Sbjct: 470 QVRKFICTGTLEEKIDEMIEEKKALADLVV 499 >gi|147676745|ref|YP_001210960.1| hypothetical protein PTH_0410 [Pelotomaculum thermopropionicum SI] gi|146272842|dbj|BAF58591.1| hypothetical protein [Pelotomaculum thermopropionicum SI] Length = 1256 Score = 120 bits (301), Expect = 1e-25, Method: Composition-based stats. Identities = 36/213 (16%), Positives = 75/213 (35%), Gaps = 23/213 (10%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSAS--KTVKCLQLANGAVYYDEEKHWKEVHDEKIKAL 59 Y + ++ +++ Q+ N V+Y ++ + H K + Sbjct: 1029 ALYRQVVEQVMEEIEHSEGITRKGLVFKLITSLKQICNHPVHYSKKGKPAKEHSGKAEKA 1088 Query: 60 EVIIE--KANAAPIIVAYHFNSDLARLQKA-----------FPQGRTLDKDPCTIQEWNE 106 ++ A ++ + L + F G K ++++ E Sbjct: 1089 LDLLAQIAAAGEKALIFTQYREMGELLVEMIREELQEEALFFHGGLPRQKRDEMVKKFQE 1148 Query: 107 --GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA 164 G P + + G GLNL + ++ + LWW+ Q +R + G R Sbjct: 1149 DKGAAPFMVVSLKAGGTGLNLTAATH-VIHYDLWWNPAVEDQATDR-----TYRIGQTRT 1202 Query: 165 VFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 V V+ LI+ T +E + + +K + L + A Sbjct: 1203 VMVHRLISLGTFEEKINTMMASKRELAGLTVAA 1235 >gi|187934940|ref|YP_001886534.1| imitation switch iswi [Clostridium botulinum B str. Eklund 17B] gi|187723093|gb|ACD24314.1| imitation switch iswi [Clostridium botulinum B str. Eklund 17B] Length = 1050 Score = 120 bits (301), Expect = 1e-25, Method: Composition-based stats. Identities = 42/213 (19%), Positives = 82/213 (38%), Gaps = 28/213 (13%) Query: 2 KQYHKFQRELYCDLQGENIEAFN----SASKTVKCLQLANGAVYYDEEKHWKEVHDEKIK 57 K Y + +++ L+ I++ N + + QL E+ + KI Sbjct: 827 KIYKMYVKDIQDKLK--QIDSRNNRIAIFAYLTRLRQLCLDPSIIVED---YDGGSGKIN 881 Query: 58 ALEVIIEKA--NAAPIIVAYHFNSDL---------ARLQKAFPQGRT--LDKDPCTIQEW 104 + +I+K+ N I++ F S L ++ + G T ++ T + Sbjct: 882 VAKELIKKSIKNNHKILLFSQFTSVLHKVCDELKGEQISYLYLDGSTPSKERIRLTHEFN 941 Query: 105 NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA 164 N I + + G GLNL ++++ F WW+ Q +R + G K Sbjct: 942 NNEDIKIFLISLKAGGTGLNLT-SADMVIHFDPWWNPAIEDQATDR-----AHRIGQKNV 995 Query: 165 VFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 V V LI + +I+E +L K + + ++ Sbjct: 996 VQVIKLITKESIEEKILLLQEDKKALIEDVITG 1028 >gi|313898327|ref|ZP_07831864.1| helicase C-terminal domain protein [Clostridium sp. HGF2] gi|312956709|gb|EFR38340.1| helicase C-terminal domain protein [Clostridium sp. HGF2] Length = 377 Score = 120 bits (301), Expect = 1e-25, Method: Composition-based stats. Identities = 38/213 (17%), Positives = 80/213 (37%), Gaps = 22/213 (10%) Query: 3 QYHKFQRELYCDLQGENIEAFNSASKTV--KCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 Y K ++ ++ + K Q+ N Y E+ ++ K++ L+ Sbjct: 150 LYRKLIADMEEKIKESEGMERRGLVLSTITKLKQICNHPDQYLGEESYRIKDSGKLEMLK 209 Query: 61 VIIEK--ANAAPIIVAYHFNSDLARLQKAFPQ-----------GRTLDKDPCTIQEWN-E 106 I E ++V + + L + G + K + + E Sbjct: 210 EICETIYEKRERVLVFTQYKEIIPYLHATLAKIFHQEGYILHGGTPVKKRSEIVAAFQQE 269 Query: 107 GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVF 166 +P + + G GLNL N ++ F WW+ Q +R + G K+ V Sbjct: 270 AYVPYIVLSLKAAGTGLNLT-AANHVIHFDRWWNPAVENQATDR-----AFRIGQKKNVI 323 Query: 167 VYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 V+ LI++ T++E + + +++K + ++ K Sbjct: 324 VHKLISKGTVEEKIDELIKSKVELSQQVIGDGK 356 >gi|188587761|ref|YP_001921450.1| hypothetical ATP-dependent helicase [Clostridium botulinum E3 str. Alaska E43] gi|188498042|gb|ACD51178.1| hypothetical ATP-dependent helicase [Clostridium botulinum E3 str. Alaska E43] Length = 1050 Score = 120 bits (301), Expect = 1e-25, Method: Composition-based stats. Identities = 44/220 (20%), Positives = 87/220 (39%), Gaps = 29/220 (13%) Query: 2 KQYHKFQRELYCDLQGENIEAFN----SASKTVKCLQLANGAVYYDEEKHWKEVHDEKIK 57 K Y + +++ L+ I++ N + + QL E+ + KI Sbjct: 827 KMYKIYVKDIQDKLK--QIDSRNNRITIFAYLTRLRQLCLDPSIIVED---YDGGSGKIN 881 Query: 58 ALEVIIEKA--NAAPIIVAYHFNSDL---------ARLQKAFPQGRTLDKDPCTI--QEW 104 + +I+K+ N I++ F S L ++ + G T K+ + + Sbjct: 882 VAKELIKKSIKNNHKILLFSQFTSVLHKVCDELKGEQISYLYLDGSTPSKERIRLAHEFN 941 Query: 105 NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA 164 N I + + G GLNL ++++ F WW+ Q +R + G K Sbjct: 942 NNEDIKIFLISLKAGGTGLNLT-SADMVIHFDPWWNPAIEDQATDR-----AHRIGQKNV 995 Query: 165 VFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA-LKKETI 203 V V LI + +I+E +L K + + ++ LK++ + Sbjct: 996 VRVIKLITKESIEEKILLLQEDKKALIEDVITGELKEDGL 1035 >gi|229020462|ref|ZP_04177215.1| Helicase, SNF2/RAD54 [Bacillus cereus AH1273] gi|229026691|ref|ZP_04183032.1| Helicase, SNF2/RAD54 [Bacillus cereus AH1272] gi|228734643|gb|EEL85296.1| Helicase, SNF2/RAD54 [Bacillus cereus AH1272] gi|228740838|gb|EEL91083.1| Helicase, SNF2/RAD54 [Bacillus cereus AH1273] Length = 855 Score = 120 bits (301), Expect = 1e-25, Method: Composition-based stats. Identities = 38/212 (17%), Positives = 82/212 (38%), Gaps = 23/212 (10%) Query: 3 QYHKFQRELYCDLQG-ENIEAFN-SASKTVKCLQLANGAVYYDEEKHWKEVHDE--KIKA 58 Y + ++ +++G IE K Q+ N Y +E+ +++ + K K Sbjct: 632 LYEQLVQDTLQNVEGLSGIERRGFILLMLNKLKQICNHPALYLKEEEPQDIIERSMKTKT 691 Query: 59 LEVIIE--KANAAPIIVAYHFNSDLARLQKAFPQ-----------GRTLDKDPCTIQEWN 105 + +IE K ++ + L++ + + I+++ Sbjct: 692 VMELIENIKDQNESCLIFTQYIGMGNMLKRMLEEKFGQRVLFLNGSVPKKERDKMIEQFQ 751 Query: 106 EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 G + + G GLNL N ++ + WW+ Q +R + G KR V Sbjct: 752 NGTYDIFILSLKAGGTGLNLT-AANHVIHYDRWWNPAVENQATDR-----AYRIGQKRFV 805 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 V+ LI T++E + + L K ++ + ++ + Sbjct: 806 HVHKLITTGTLEEKIDEMLERKQSLNNAVITS 837 >gi|320093666|ref|ZP_08025543.1| hypothetical protein HMPREF9005_0155 [Actinomyces sp. oral taxon 178 str. F0338] gi|319979382|gb|EFW10867.1| hypothetical protein HMPREF9005_0155 [Actinomyces sp. oral taxon 178 str. F0338] Length = 1048 Score = 120 bits (301), Expect = 1e-25, Method: Composition-based stats. Identities = 38/184 (20%), Positives = 68/184 (36%), Gaps = 24/184 (13%) Query: 26 ASKTVKCLQLANGAVYYDEEKHWKEVHDEKIK----ALEVIIEKANAAPIIVAYHFNSDL 81 + + QLA D + V K + L I+ + +V F S L Sbjct: 858 LASITRLRQLALDPALVD--GAYAHVGSAKTEYLVGQLVQIVPR--GHQALVFSQFTSFL 913 Query: 82 ARLQKAFP---------QGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNIL 132 AR+++A G T + I+ + G + + G GL L + Sbjct: 914 ARIRRALERRGITVAQLDGATRGR-ARVIERFRSGAASVFLISLKAGGTGLTLTEADYVY 972 Query: 133 VFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQD 192 V WW+ Q ++R + G + V VY L+A +TI+ V++ K + Sbjct: 973 VM-DPWWNPAAEAQAVDR-----AHRIGQSKKVNVYRLVADDTIEAKVVELQDRKRRLVS 1026 Query: 193 LLLN 196 +++ Sbjct: 1027 KVVD 1030 >gi|170084045|ref|XP_001873246.1| SNF2 family DNA-dependent ATPase [Laccaria bicolor S238N-H82] gi|164650798|gb|EDR15038.1| SNF2 family DNA-dependent ATPase [Laccaria bicolor S238N-H82] Length = 1573 Score = 120 bits (301), Expect = 1e-25, Method: Composition-based stats. Identities = 31/157 (19%), Positives = 65/157 (41%), Gaps = 19/157 (12%) Query: 52 HDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQK----------AFPQGRTLDKDPC 99 K+ L+ ++++ A +++ + + +++ L+ Sbjct: 1314 DSAKLARLDSLLQELKAGDHRVLIYFQMTRMMDLMEEYLIYRQYKYLRLDGSSKLEDRRD 1373 Query: 100 TIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQ 158 + +W I + + G G+NL + +VF+ W+ Q ++R + Sbjct: 1374 MVIDWQTRPDIFVFLLSTRAGGLGINLT-AADTVVFYDHDWNPSNDAQAMDR-----AHR 1427 Query: 159 AGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 G R V VY LI + TIDE ++Q R K +QD+++ Sbjct: 1428 LGQTRQVTVYRLITKGTIDERIIQLARVKKDVQDIVV 1464 >gi|71004464|ref|XP_756898.1| hypothetical protein UM00751.1 [Ustilago maydis 521] gi|74704380|sp|Q4PGL2|INO80_USTMA RecName: Full=Putative DNA helicase INO80 gi|46095890|gb|EAK81123.1| hypothetical protein UM00751.1 [Ustilago maydis 521] Length = 1910 Score = 120 bits (301), Expect = 1e-25, Method: Composition-based stats. Identities = 29/158 (18%), Positives = 68/158 (43%), Gaps = 19/158 (12%) Query: 51 VHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQK----------AFPQGRTLDKDP 98 V K+ L+V++ + AN +++ + + +++ + Sbjct: 1576 VDSSKLAKLDVLLRELKANGHRVLIYFQMTRMIDLMEEYLIYRQYKYLRLDGASKISDRR 1635 Query: 99 CTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 + +W + ++ + + G G+NL + ++F+ W+ Q ++R Sbjct: 1636 DMVTDWQTKPELFIFLLSTRAGGLGINLT-AADTVIFYDHDWNPSNDSQAMDR-----AH 1689 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 + G + V VY LI + TIDE +++ R K +QD+++ Sbjct: 1690 RLGQTKQVTVYRLITKGTIDERIVRLARNKKEVQDIVV 1727 >gi|187736256|ref|YP_001878368.1| Non-specific serine/threonine protein kinase [Akkermansia muciniphila ATCC BAA-835] gi|187426308|gb|ACD05587.1| Non-specific serine/threonine protein kinase [Akkermansia muciniphila ATCC BAA-835] Length = 1171 Score = 120 bits (300), Expect = 1e-25, Method: Composition-based stats. Identities = 36/211 (17%), Positives = 77/211 (36%), Gaps = 25/211 (11%) Query: 2 KQYH-KFQR--ELYCDLQGENIEAFNSASKT---VKCLQLANGAVYYDEEKHWKEVHDEK 55 + Y + +R + L + NS + ++ Q+ D + + K Sbjct: 943 QLYKAELRRIQQALLGLDSDESVKKNSFAILQGLMRLRQICCHPGLVDP--KYAKEDSAK 1000 Query: 56 IKALEVIIEKA--NAAPIIVAYHFNSDLARLQKAFP---------QGRTLDKDPCTIQEW 104 + AL ++++ ++V F S L ++ G+T D+ + Sbjct: 1001 MTALFYLLDQLREEGHKVLVFSQFVSMLEIIKNRLEAENRPLNYLTGQTKDRRGEIEKFQ 1060 Query: 105 NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA 164 + + G GLNL + +V + WW+ Q I+R + G K Sbjct: 1061 TTKDPSVFLLSLKAGGAGLNLT-SASYVVLYDPWWNPAVESQAIDR-----THRIGQKNK 1114 Query: 165 VFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 V Y L+ +++++E + K+ + +L Sbjct: 1115 VIAYRLLTKDSVEEKIRILQHQKNQLVANVL 1145 >gi|253574567|ref|ZP_04851908.1| non-specific serine/threonine protein kinase [Paenibacillus sp. oral taxon 786 str. D14] gi|251846272|gb|EES74279.1| non-specific serine/threonine protein kinase [Paenibacillus sp. oral taxon 786 str. D14] Length = 1053 Score = 120 bits (300), Expect = 1e-25, Method: Composition-based stats. Identities = 37/213 (17%), Positives = 80/213 (37%), Gaps = 25/213 (11%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKT--VKCLQLANGA---VYYDEEKHWKEVHDEKI 56 + Y EL + ++ A + + Q+ + V K K+ Sbjct: 814 RLYQSVTAELLDQIGSQSGIARKGLVLSSLTRLKQICDHPELVVGSRPAKTAAFGRSGKM 873 Query: 57 KALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQ-----------GRTLDKDPCTIQE 103 + L +++ N ++ + LQ+ + G + ++ Sbjct: 874 ERLGELLDMIMDNGEGALIFTQYVRMGELLQERLTERYGVRPFFLHGGVPKAERDQMVRA 933 Query: 104 WNEGK-IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFK 162 + EG+ P+ + G GLNL N +V + WW+ Q +R+ + G + Sbjct: 934 FQEGEGSPIFVLSLKAGGVGLNLTR-ANHVVHYDRWWNPAVENQATDRVF-----RIGQQ 987 Query: 163 RAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 + V V+ LI Q T++E + + + K T+ + ++ Sbjct: 988 KNVEVHKLICQGTLEERIDELIERKKTLSEQVV 1020 >gi|152977445|ref|YP_001376962.1| non-specific serine/threonine protein kinase [Bacillus cereus subsp. cytotoxis NVH 391-98] gi|152026197|gb|ABS23967.1| Non-specific serine/threonine protein kinase [Bacillus cytotoxicus NVH 391-98] Length = 918 Score = 120 bits (300), Expect = 1e-25, Method: Composition-based stats. Identities = 40/213 (18%), Positives = 78/213 (36%), Gaps = 25/213 (11%) Query: 3 QYHKFQREL---YCDLQGENIEAFNSASKTVKCLQLANG-AVYYDEEK-HWKEVHDEKIK 57 Y + ++ +L G F K Q+ N A+Y E+ K++ Sbjct: 695 LYEQLVQDTLKNVENLNGIERRGF-ILLMLNKLKQICNHPALYLKEDVPKDIVQRSMKMQ 753 Query: 58 ALEVIIE--KANAAPIIVAYHFN---SDLARLQKAFPQGRTL--------DKDPCTIQEW 104 L +IE K ++ + L + + R L + I+++ Sbjct: 754 TLMDLIENIKNQNESCLIFTQYIGMGHMLQTVLEETFGQRVLYLNGSVPKKERDKMIEQF 813 Query: 105 NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA 164 + + G GLNL N ++ + WW+ Q +R + G KR Sbjct: 814 QNRTYDIFILSLKAGGTGLNLT-AANHVIHYDRWWNPAVENQATDR-----AYRIGQKRF 867 Query: 165 VFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 V V+ LI T++E + + L K ++ + ++ + Sbjct: 868 VHVHKLITTGTLEEKIDEMLERKQSLNNAVITS 900 >gi|125586260|gb|EAZ26924.1| hypothetical protein OsJ_10853 [Oryza sativa Japonica Group] Length = 1396 Score = 120 bits (300), Expect = 2e-25, Method: Composition-based stats. Identities = 31/160 (19%), Positives = 71/160 (44%), Gaps = 19/160 (11%) Query: 51 VHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAF----------PQGRTLDKDP 98 K++ L++++ + A +++ L L+ + Sbjct: 1136 TDSGKLQTLDILLRRLRAENHRVLLFAQMTKMLDILEDYMNFRKFKYFRLDGSSAISDRR 1195 Query: 99 CTIQEW-NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 ++++ N I + + G G+NL + ++F+ + W+ + QQ ++R Sbjct: 1196 DMVRDFQNRNDIFVFLLSTRAGGLGINLT-AADTVIFYEIDWNPTQDQQAMDR-----TH 1249 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + G + V VY LI ++TI+E +LQR + K+ +Q+L++ Sbjct: 1250 RLGQTKEVTVYRLICKDTIEEKILQRAKQKNAVQELVMKG 1289 >gi|94265883|ref|ZP_01289612.1| SNF2-related:Helicase-like [delta proteobacterium MLMS-1] gi|93453578|gb|EAT03977.1| SNF2-related:Helicase-like [delta proteobacterium MLMS-1] Length = 389 Score = 120 bits (300), Expect = 2e-25, Method: Composition-based stats. Identities = 37/209 (17%), Positives = 73/209 (34%), Gaps = 24/209 (11%) Query: 5 HKFQRELYCDLQGENIEAFN-----SASKTVKCLQLANGA-VYYDEEKHWKEVHDEKIKA 58 +R LQ EA ++ ++ + A + + + Sbjct: 167 ETIRRRALEVLQENEGEAAGRRHLKVLAELMRLRRAACHPRLVLGKGALMAGKLPLFAEV 226 Query: 59 LEVIIEKANAAPIIVAYHFNSDLARLQKAFP---------QGRTLDKDPC-TIQEWNEGK 108 L II +N +V F LA +++ G T ++ + + G+ Sbjct: 227 LHDII--SNRHKALVFSQFVDHLAIVREYLDGQGIGYQYLDGSTPARERQRAVAAFQAGE 284 Query: 109 IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVY 168 + + G GLNL + ++ WW+ Q +R + G +R V +Y Sbjct: 285 GEVFCISLKAGGTGLNLT-AADYVIHLDPWWNPAVEDQASDR-----AHRIGQERPVTIY 338 Query: 169 YLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 L+ + +I+E +L K + + LL Sbjct: 339 RLVTKGSIEEKILALHGHKRDLAENLLRG 367 >gi|257467968|ref|ZP_05632064.1| SNF2-related protein [Fusobacterium ulcerans ATCC 49185] gi|317062254|ref|ZP_07926739.1| helicase [Fusobacterium ulcerans ATCC 49185] gi|313687930|gb|EFS24765.1| helicase [Fusobacterium ulcerans ATCC 49185] Length = 1030 Score = 120 bits (300), Expect = 2e-25, Method: Composition-based stats. Identities = 37/177 (20%), Positives = 70/177 (39%), Gaps = 16/177 (9%) Query: 29 TVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAF 88 + QL N + E+ K E + L + ++V F L ++K Sbjct: 841 ITRLRQLCNHPQLFLEDYSGKSSKLEALLELLEECKS-GGHRVLVFSQFTEMLEIIKKNM 899 Query: 89 PQ--------GRTLDKDP-CTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWW 139 P+ G+T K+ ++ +N G + + G GLN+ G + ++ F WW Sbjct: 900 PENMTYLYLDGKTKAKERIELVENFNSGNEDVFIISLKAGGSGLNIT-GADTVIHFDPWW 958 Query: 140 DLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + Q R + G K+ V V+ ++A+ TI+E + K + +L+ Sbjct: 959 NSSVEDQATAR-----AYRLGQKKNVNVFKMVAKGTIEEKINTIKEGKEELIREILD 1010 >gi|304311942|ref|YP_003811540.1| Predicted helicase [gamma proteobacterium HdN1] gi|301797675|emb|CBL45896.1| Predicted helicase [gamma proteobacterium HdN1] Length = 883 Score = 120 bits (300), Expect = 2e-25, Method: Composition-based stats. Identities = 41/212 (19%), Positives = 72/212 (33%), Gaps = 22/212 (10%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASK--TVKCLQLANGAVYYDEEKHWKEVHDEKIKAL 59 Y + EL L+ + ++ Q+ N + + WK K L Sbjct: 651 ALYQRTVEELASALEKSDGVERKGLVLAFLMRFKQICNHPSQWLGDGTWKPADSGKFARL 710 Query: 60 EVIIE--KANAAPIIVAYHFNSDLARLQKAFP-----------QGRTLDKDPCTIQEWNE 106 I E A ++V F A L G + K ++ + E Sbjct: 711 AEITETIAAKQEKVLVFTQFRETTAPLAAFLGNVFGREGLVLHGGTAVGKRRELVKRFQE 770 Query: 107 GK-IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 + IP + G GLNL + ++ F WW+ Q +R + G R V Sbjct: 771 DEAIPFFVLSLKAGGTGLNLT-AASHVIHFDRWWNPAVENQATDRAW-----RIGQHRNV 824 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + + + TI+E + +R+K + +L Sbjct: 825 LAHKFVCRGTIEERIDALIRSKQQLVQDVLEG 856 >gi|195451229|ref|XP_002072824.1| GK13479 [Drosophila willistoni] gi|194168909|gb|EDW83810.1| GK13479 [Drosophila willistoni] Length = 1892 Score = 120 bits (300), Expect = 2e-25, Method: Composition-based stats. Identities = 33/176 (18%), Positives = 70/176 (39%), Gaps = 21/176 (11%) Query: 44 EEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAF----------PQG 91 K K+ L+ ++ + + +++ + L++ Sbjct: 1151 PNKETLITDAGKLFVLDSLLTRLKSEGHRVLIYSQMTKMIDLLEEYMWHRKHRYMRLDGS 1210 Query: 92 RTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 + + ++ I + + G G+NL + ++F+ W+ QQ ++R Sbjct: 1211 SKISARRDMVADFQTRSDIFVFLLSTRAGGLGINLT-AADTVIFYDSDWNPTVDQQAMDR 1269 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA--LKKETIH 204 + G + V VY LI + TI+E +LQR R KS IQ ++++ K +T+ Sbjct: 1270 -----AHRLGQTKQVTVYRLICKGTIEERILQRAREKSEIQRMVISGGNFKPDTLK 1320 >gi|108708155|gb|ABF95950.1| transcriptional activator, putative, expressed [Oryza sativa Japonica Group] Length = 1457 Score = 120 bits (300), Expect = 2e-25, Method: Composition-based stats. Identities = 31/160 (19%), Positives = 71/160 (44%), Gaps = 19/160 (11%) Query: 51 VHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAF----------PQGRTLDKDP 98 K++ L++++ + A +++ L L+ + Sbjct: 1136 TDSGKLQTLDILLRRLRAENHRVLLFAQMTKMLDILEDYMNFRKFKYFRLDGSSAISDRR 1195 Query: 99 CTIQEW-NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 ++++ N I + + G G+NL + ++F+ + W+ + QQ ++R Sbjct: 1196 DMVRDFQNRNDIFVFLLSTRAGGLGINLT-AADTVIFYEIDWNPTQDQQAMDR-----TH 1249 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + G + V VY LI ++TI+E +LQR + K+ +Q+L++ Sbjct: 1250 RLGQTKEVTVYRLICKDTIEEKILQRAKQKNAVQELVMKG 1289 >gi|332173366|gb|AEE22620.1| SNF2-related protein [Glaciecola agarilytica 4H-3-7+YE-5] Length = 1440 Score = 120 bits (300), Expect = 2e-25, Method: Composition-based stats. Identities = 40/214 (18%), Positives = 71/214 (33%), Gaps = 31/214 (14%) Query: 8 QRELYCDLQGENIEAFNS--------------ASKTVKCLQLANGAVYYDEEKHWKEVHD 53 +R+ Y L+ I+ N ++ VK Q + Sbjct: 1214 ERDFYEALRLNAIDNINQSGQHANASEQRIRMLAELVKLRQACCNPKLV-MAETTIPSAK 1272 Query: 54 EKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQ---------GRTLDKDPCT-IQE 103 + K N ++ F L +++ G T K + Sbjct: 1273 LAALDALLEELKLNNHKALIFSQFVGHLQLIKQHLEDKGFDYQYLDGSTPQKQRQASVNA 1332 Query: 104 WNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKR 163 + G+ + + G GLNL + ++ WW+ +Q +R + G R Sbjct: 1333 FQRGQGDIFLISLKAGGSGLNLT-AADYVIHMDPWWNPAVEEQASDR-----AHRIGQLR 1386 Query: 164 AVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 V +Y LI QNTI+E ++ + K + D LL Sbjct: 1387 PVTIYRLITQNTIEEKIVALHKQKRDLADNLLAG 1420 >gi|296331256|ref|ZP_06873728.1| putative ATP-binding SNF2 helicase or protein kinase [Bacillus subtilis subsp. spizizenii ATCC 6633] gi|305676243|ref|YP_003867915.1| putative ATP-binding SNF2 helicase or protein kinase [Bacillus subtilis subsp. spizizenii str. W23] gi|296151371|gb|EFG92248.1| putative ATP-binding SNF2 helicase or protein kinase [Bacillus subtilis subsp. spizizenii ATCC 6633] gi|305414487|gb|ADM39606.1| putative ATP-binding SNF2 helicase or protein kinase [Bacillus subtilis subsp. spizizenii str. W23] Length = 922 Score = 120 bits (300), Expect = 2e-25, Method: Composition-based stats. Identities = 37/213 (17%), Positives = 84/213 (39%), Gaps = 25/213 (11%) Query: 3 QYHKFQRELY---CDLQGENIEAFNSASKTVKCLQLANG-AVY-YDEEKHWKEVHDEKIK 57 Y + ++ + L G +A S + Q+ + A+Y +++ K++ Sbjct: 694 LYEQLVKDTFDHMTSLTGMQRKAL-ILSMLGRLKQICDHPALYLKEDQTELLAGRSVKLE 752 Query: 58 ALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQG---------RTLDKDPCT--IQEW 104 L ++ A ++ + +++ + +L K ++++ Sbjct: 753 KLLELMTAIRAQNESCLIFTQYIQMGNMMKRLLEKTFGEPVQFLNGSLSKQERDTLVEKF 812 Query: 105 NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA 164 + + P L + G GLNL N ++ + WW+ Q +R + G +R Sbjct: 813 QKKEYPTLILSLKAGGTGLNLT-AANHVIHYDRWWNPAVENQATDR-----AYRIGQERF 866 Query: 165 VFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 V V+ +I TI+E + L +K T+ D ++ + Sbjct: 867 VHVHKMITTGTIEEKIDVMLESKQTLNDQIIQS 899 >gi|310824688|ref|YP_003957046.1| snf2/helicase domain-containing protein [Stigmatella aurantiaca DW4/3-1] gi|309397760|gb|ADO75219.1| SNF2/helicase domain protein [Stigmatella aurantiaca DW4/3-1] Length = 1299 Score = 120 bits (300), Expect = 2e-25, Method: Composition-based stats. Identities = 29/158 (18%), Positives = 61/158 (38%), Gaps = 18/158 (11%) Query: 51 VHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLAR---------LQKAFPQGRTLDKDPC 99 + K++ + +E+ A + ++ F L + + G+T + Sbjct: 1125 LPSSKLERMVERVEELRAEGSRALIFSQFVRLLNLAGEALEARGITFQYLDGQTPAAERQ 1184 Query: 100 T-IQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQ 158 ++ + G+ + + G GLNL + ++ WW+ Q +R + Sbjct: 1185 ARVEAFQRGEGDVFLISLKAGGTGLNLT-AADHVIHLDPWWNPAVEDQATDR-----AHR 1238 Query: 159 AGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 G R V V L+++ TI+E +L K + LL+ Sbjct: 1239 IGQTRPVTVSRLVSEGTIEEAILALHAEKRELAMSLLS 1276 >gi|224371758|ref|YP_002605922.1| putative helicase [Desulfobacterium autotrophicum HRM2] gi|223694475|gb|ACN17758.1| putative helicase [Desulfobacterium autotrophicum HRM2] Length = 942 Score = 120 bits (300), Expect = 2e-25, Method: Composition-based stats. Identities = 39/180 (21%), Positives = 70/180 (38%), Gaps = 21/180 (11%) Query: 29 TVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQK 86 + Q+A+ + ++ K + L + +A +++ +F L + Sbjct: 754 LGELRQIASIPEIKSDN----QIISPKREVLMEHVTEAVAGNHKVLIFANFLHSLDCISL 809 Query: 87 AFPQ---------GRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSL 137 + G T D+ + + L + G GLNL + + F Sbjct: 810 DMEKAGLDHLVMTGATRDRSAIVERFQTDNSCAALMMTLKTGGLGLNLT-AADYVFLFDP 868 Query: 138 WWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 WW++ Q I+R + G K VF Y LIA+NTI+E +L+ K + D L+ A Sbjct: 869 WWNVAAENQAIDR-----AHRMGQKNTVFSYRLIARNTIEEKILKLQAKKKALFDSLIAA 923 >gi|164688165|ref|ZP_02212193.1| hypothetical protein CLOBAR_01810 [Clostridium bartlettii DSM 16795] gi|164602578|gb|EDQ96043.1| hypothetical protein CLOBAR_01810 [Clostridium bartlettii DSM 16795] Length = 700 Score = 120 bits (300), Expect = 2e-25, Method: Composition-based stats. Identities = 43/206 (20%), Positives = 80/206 (38%), Gaps = 20/206 (9%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEV 61 K Y+ F L + N + S K L+ + + + + K++ L Sbjct: 479 KVYNTFLSILKKQIIENNSDNVTLFSYLTKLRMLS---ISPELVVKNYKGKNSKLEMLIK 535 Query: 62 IIEKANAAPIIVAYHFNSDLARLQKAFPQGRT----------LDKDPCTIQEWNEGK-IP 110 II+ + I+V F L + K F + K ++++N+ K Sbjct: 536 IIKSSKDRKILVFSQFTQVLGLIAKRFEKENIEFNYLDGKIDAKKRLELVEDFNQNKSKK 595 Query: 111 LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYL 170 + + G GLNL +++V F W++ Q +R + G K V V L Sbjct: 596 VFLISLKAGGTGLNLT-SASMVVHFDPWFNPAVEDQASDR-----AHRIGQKNIVDVIKL 649 Query: 171 IAQNTIDELVLQRLRTKSTIQDLLLN 196 I+++T++E V K + D ++N Sbjct: 650 ISKDTVEEKVEAIKEYKKELADDIIN 675 >gi|195391896|ref|XP_002054595.1| GJ24541 [Drosophila virilis] gi|194152681|gb|EDW68115.1| GJ24541 [Drosophila virilis] Length = 1632 Score = 119 bits (299), Expect = 2e-25, Method: Composition-based stats. Identities = 34/176 (19%), Positives = 71/176 (40%), Gaps = 21/176 (11%) Query: 44 EEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAF----------PQG 91 +K K+ L+ ++ + A +++ + L++ Sbjct: 1160 PDKETLITDAGKLFVLDSLLTRLKAEGHRVLIYSQMTKMIDLLEEYMWHRKHRYMRLDGS 1219 Query: 92 RTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 + + ++ I + + G G+NL + ++F+ W+ QQ ++R Sbjct: 1220 SKISARRDMVADFQTRADIFVFLLSTRAGGLGINLT-AADTVIFYDSDWNPTVDQQAMDR 1278 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA--LKKETIH 204 + G + V VY LI + TI+E +LQR R KS IQ ++++ K +T+ Sbjct: 1279 -----AHRLGQTKQVTVYRLICKGTIEERILQRAREKSEIQRMVISGGNFKPDTLK 1329 >gi|302555175|ref|ZP_07307517.1| helicase [Streptomyces viridochromogenes DSM 40736] gi|302472793|gb|EFL35886.1| helicase [Streptomyces viridochromogenes DSM 40736] Length = 284 Score = 119 bits (299), Expect = 2e-25, Method: Composition-based stats. Identities = 35/213 (16%), Positives = 70/213 (32%), Gaps = 25/213 (11%) Query: 2 KQYHKFQRELYCDLQGENIEAFNS--ASKTVKCLQLANGAVYYDEEKHWKEVH------- 52 Y RE ++ A Q+ + + +E+H + Sbjct: 53 ALYEAVVRESMLAIETAEGIARRGMVLKLLTSLKQICDHPALFLKEEHAQSGDRLAARSG 112 Query: 53 DEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQ----------GRTLDKDPCTIQ 102 + + A +V + + G + + + Sbjct: 113 KLALLDELLDTLLAEDGSALVFTQYVGMARLITSHLATRAVPVDLLHGGTPVPERERMVD 172 Query: 103 EWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFK 162 + G P+L + G GLNL G+ +V F WW+ +Q +R + G Sbjct: 173 RFQAGSTPVLVLSLKAAGTGLNLTRAGH-VVHFDRWWNPAVEEQATDR-----AYRIGQT 226 Query: 163 RAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 + V V+ LI + T+++ + + L K + D +L Sbjct: 227 QPVQVHRLITEGTVEDRIAEMLEAKRALADAIL 259 >gi|329947496|ref|ZP_08294696.1| protein, SNF2 family [Actinomyces sp. oral taxon 170 str. F0386] gi|328524738|gb|EGF51795.1| protein, SNF2 family [Actinomyces sp. oral taxon 170 str. F0386] Length = 1205 Score = 119 bits (299), Expect = 2e-25, Method: Composition-based stats. Identities = 26/156 (16%), Positives = 57/156 (36%), Gaps = 16/156 (10%) Query: 52 HDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTLD--------KDPCTI 101 K++AL + + +V F L+ +++ I Sbjct: 1024 PSAKVEALLEHLRPILSEGHRALVFSQFTRYLSGVREHLEDAGVRTAYMDGSTPNRQDVI 1083 Query: 102 QEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGF 161 + G+ + + G GL L + + WW+ + +Q ++R + G Sbjct: 1084 DAFRAGEADVFLISLKAGGFGLTLTE-ADYVFLLDPWWNPQAEEQAVDR-----THRIGQ 1137 Query: 162 KRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + V VY L++ +TI+E V+ K+ + ++ Sbjct: 1138 DKPVMVYRLVSADTIEEKVMALKEKKAELFARVVEG 1173 >gi|323508306|emb|CBQ68177.1| related to INO80-ATPase with chromatin remodeling and helicase activity [Sporisorium reilianum] Length = 1910 Score = 119 bits (299), Expect = 2e-25, Method: Composition-based stats. Identities = 28/158 (17%), Positives = 68/158 (43%), Gaps = 19/158 (12%) Query: 51 VHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQK----------AFPQGRTLDKDP 98 V K+ L++++ + AN +++ + + +++ + Sbjct: 1581 VDSSKMAKLDMLLRELKANGHRVLIYFQMTRMIDLMEEYLIYRQYKYLRLDGASKISDRR 1640 Query: 99 CTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 + +W + ++ + + G G+NL + ++F+ W+ Q ++R Sbjct: 1641 DMVTDWQTKPELFIFLLSTRAGGLGINLT-AADTVIFYDHDWNPSNDSQAMDR-----AH 1694 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 + G + V VY LI + TIDE +++ R K +QD+++ Sbjct: 1695 RLGQTKQVTVYRLITKGTIDERIVRLARNKKEVQDIVV 1732 >gi|303388827|ref|XP_003072647.1| Mot1 helicase-like protein [Encephalitozoon intestinalis ATCC 50506] gi|303301788|gb|ADM11287.1| Mot1 helicase-like protein [Encephalitozoon intestinalis ATCC 50506] Length = 1257 Score = 119 bits (299), Expect = 2e-25, Method: Composition-based stats. Identities = 49/217 (22%), Positives = 88/217 (40%), Gaps = 32/217 (14%) Query: 2 KQYHKF------QRELYCDLQGENIEAFNSASKTVKCLQLA-NGAVYYDEEKHWKEVHDE 54 K Y + ++ DL+ I+ N K + L LA + ++ + Sbjct: 1029 KLYREINERGGKEKLEDVDLEYGKIDQKNVGFKRTRDLLLAVSHMSHFKDSSEV----SC 1084 Query: 55 KIKALEVIIEKANA----APIIVAYHFNSDLA-RLQKAFPQGRTL----------DKDPC 99 K+KALE II + I++ + F S + ++ + + Sbjct: 1085 KVKALEDIISLCGGEDLRSKILIFFQFKSSIDFVIKDIMEKYKFKYSRLDGSVPSSTRAK 1144 Query: 100 TIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQA 159 +E+N G +LF G GLNL G + +V + W+ Q ++R + Sbjct: 1145 IAEEFNTGTTQILFLTTQVGGLGLNLT-GADTVVMYEHDWNPFNDLQAMDR-----AHRI 1198 Query: 160 GFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 G KR V V+ LIA+NT++E V+ K + + L++ Sbjct: 1199 GQKRTVNVFRLIAKNTLEEKVMNLQSFKMFVANSLVS 1235 >gi|319936092|ref|ZP_08010514.1| SWF/SNF family helicase [Coprobacillus sp. 29_1] gi|319808879|gb|EFW05397.1| SWF/SNF family helicase [Coprobacillus sp. 29_1] Length = 1069 Score = 119 bits (299), Expect = 2e-25, Method: Composition-based stats. Identities = 38/206 (18%), Positives = 74/206 (35%), Gaps = 25/206 (12%) Query: 6 KFQRELYCDLQGENIEAFNSASKTVKCLQLA--NGAVYYDEEKHWKEVHDEKIKALEVII 63 + + L L + + + + QL + +Y E K+K +I Sbjct: 855 QVNKSLQEKLDIHQLGRIDILAMLTRLRQLCQDSRLLY-----ETVEEPSSKLKGCMELI 909 Query: 64 EKA--NAAPIIVAYHFNSDLARLQK----------AFPQGRTLDKDPCTIQEWNEGKIPL 111 N I++ F S L +++ + +K + + + + L Sbjct: 910 HSLKENHKKILLFSSFTSVLHLIEEQCHKEHISYYLLDGSISKEKRKKMVDAFQKDETTL 969 Query: 112 LFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLI 171 + G GLNL ++ F WW++ Q +R + G K AV V+ LI Sbjct: 970 FLISLKAGGAGLNLT-SAQAVIHFDPWWNMSAKNQATDR-----AHRIGQKEAVQVFSLI 1023 Query: 172 AQNTIDELVLQRLRTKSTIQDLLLNA 197 +N+I+E ++ K + D + Sbjct: 1024 MKNSIEEKIMDLQNQKKNLADTFVEG 1049 >gi|25011706|ref|NP_736101.1| Snf2 family protein [Streptococcus agalactiae NEM316] gi|77414227|ref|ZP_00790389.1| Snf2 family protein [Streptococcus agalactiae 515] gi|24413246|emb|CAD47325.1| Unknown [Streptococcus agalactiae NEM316] gi|77159716|gb|EAO70865.1| Snf2 family protein [Streptococcus agalactiae 515] Length = 1032 Score = 119 bits (299), Expect = 2e-25, Method: Composition-based stats. Identities = 37/185 (20%), Positives = 69/185 (37%), Gaps = 24/185 (12%) Query: 26 ASKTVKCLQLANGA-VYYDEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLA 82 S + Q+ + ++ D + K+++L ++ + N ++ F L Sbjct: 839 LSGITRLRQICDTPRLFMDYDGE-----SGKLESLHQLLTQIKENGHRALIFSQFRGMLD 893 Query: 83 RLQKAFP----------QGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNIL 132 ++ ++ + +N G + G GLNL G + + Sbjct: 894 IAEREMVAMGLTTYKITGSTPANERHEMTRAFNAGSKDAFLISLKAGGVGLNLT-GADTV 952 Query: 133 VFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQD 192 V LWW+ Q I R + G K V VY LI + TI+E +L+ TK + Sbjct: 953 VLIDLWWNPAVEMQAISR-----AHRLGQKENVEVYRLITRGTIEEKILEMQETKKHLVT 1007 Query: 193 LLLNA 197 +L+ Sbjct: 1008 TVLDG 1012 >gi|115371958|ref|ZP_01459270.1| helicase [Stigmatella aurantiaca DW4/3-1] gi|115370923|gb|EAU69846.1| helicase [Stigmatella aurantiaca DW4/3-1] Length = 857 Score = 119 bits (299), Expect = 2e-25, Method: Composition-based stats. Identities = 29/158 (18%), Positives = 61/158 (38%), Gaps = 18/158 (11%) Query: 51 VHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLAR---------LQKAFPQGRTLDKDPC 99 + K++ + +E+ A + ++ F L + + G+T + Sbjct: 683 LPSSKLERMVERVEELRAEGSRALIFSQFVRLLNLAGEALEARGITFQYLDGQTPAAERQ 742 Query: 100 T-IQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQ 158 ++ + G+ + + G GLNL + ++ WW+ Q +R + Sbjct: 743 ARVEAFQRGEGDVFLISLKAGGTGLNLT-AADHVIHLDPWWNPAVEDQATDR-----AHR 796 Query: 159 AGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 G R V V L+++ TI+E +L K + LL+ Sbjct: 797 IGQTRPVTVSRLVSEGTIEEAILALHAEKRELAMSLLS 834 >gi|163942929|ref|YP_001647813.1| non-specific serine/threonine protein kinase [Bacillus weihenstephanensis KBAB4] gi|163865126|gb|ABY46185.1| Non-specific serine/threonine protein kinase [Bacillus weihenstephanensis KBAB4] Length = 918 Score = 119 bits (299), Expect = 2e-25, Method: Composition-based stats. Identities = 38/212 (17%), Positives = 80/212 (37%), Gaps = 23/212 (10%) Query: 3 QYHKFQRELYCDLQG-ENIEAFN-SASKTVKCLQLANGAVYYDEEKHWKEVHDE--KIKA 58 Y + ++ +++G IE K Q+ N Y +E+ + + + K K Sbjct: 695 LYEQLVQDTLQNVEGLSGIERRGFILLMLNKLKQICNHPALYLKEEEPQNIVERSMKTKT 754 Query: 59 LEVIIE--KANAAPIIVAYHFNSDLARLQKAFPQ-----------GRTLDKDPCTIQEWN 105 + +IE K ++ + L+ + + I+++ Sbjct: 755 VMELIENIKDQNESCLIFTQYIGMGNMLKSMLEETFGQRVLFLNGSVPKKERDKMIEQFQ 814 Query: 106 EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 G + + G GLNL N ++ + WW+ Q +R + G KR V Sbjct: 815 NGTYDIFILSLKAGGTGLNLT-AANHVIHYDRWWNPAVENQATDR-----AYRIGQKRFV 868 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 V+ LI T++E + + L K ++ + ++ + Sbjct: 869 HVHKLITTGTLEEKIDEMLERKQSLNNAVITS 900 >gi|319745629|gb|EFV97930.1| Snf2 family protein [Streptococcus agalactiae ATCC 13813] Length = 1032 Score = 119 bits (299), Expect = 2e-25, Method: Composition-based stats. Identities = 37/185 (20%), Positives = 69/185 (37%), Gaps = 24/185 (12%) Query: 26 ASKTVKCLQLANGA-VYYDEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLA 82 S + Q+ + ++ D + K+++L ++ + N ++ F L Sbjct: 839 LSGITRLRQICDTPRLFMDYDGE-----SGKLESLRQLLTQIKENGHRALIFSQFRGMLD 893 Query: 83 RLQKAFP----------QGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNIL 132 ++ ++ + +N G + G GLNL G + + Sbjct: 894 IAEREMVAMGLTTYKITGSTPANERHEMTRAFNAGSKDAFLISLKAGGVGLNLT-GADTV 952 Query: 133 VFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQD 192 V LWW+ Q I R + G K V VY LI + TI+E +L+ TK + Sbjct: 953 VLIDLWWNPAVEMQAISR-----AHRLGQKENVEVYRLITRGTIEEKILEMQETKKHLVT 1007 Query: 193 LLLNA 197 +L+ Sbjct: 1008 TVLDG 1012 >gi|270014503|gb|EFA10951.1| hypothetical protein TcasGA2_TC004111 [Tribolium castaneum] Length = 1441 Score = 119 bits (299), Expect = 2e-25, Method: Composition-based stats. Identities = 33/176 (18%), Positives = 72/176 (40%), Gaps = 21/176 (11%) Query: 44 EEKHWKEVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQKAF----------PQG 91 +K K+ L+ ++++ +++ + L++ Sbjct: 1078 PDKETLVTDSGKLSVLDGLLKRLKEEGHRVLIYSQMTKMIDLLEEYMWHRHHKYMRLDGS 1137 Query: 92 RTLDKDPCTIQEWNEG-KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 + + + ++ I + + G G+NL + ++F+ W+ QQ ++R Sbjct: 1138 SKISERRDMVADFQARTDIFVFLLSTRAGGLGINLT-AADTVIFYDSDWNPTVDQQAMDR 1196 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA--LKKETIH 204 + G + V VY LI + +I+E +LQR R KS IQ L+++ K +T+ Sbjct: 1197 -----AHRLGQTKQVTVYRLICKGSIEERILQRAREKSEIQKLVISGGNFKPDTLK 1247 >gi|241765480|ref|ZP_04763446.1| Non-specific serine/threonine protein kinase [Acidovorax delafieldii 2AN] gi|241364765|gb|EER59758.1| Non-specific serine/threonine protein kinase [Acidovorax delafieldii 2AN] Length = 940 Score = 119 bits (299), Expect = 2e-25, Method: Composition-based stats. Identities = 37/207 (17%), Positives = 77/207 (37%), Gaps = 28/207 (13%) Query: 5 HKFQRELYCDLQGENIEAFNSASKTVKCLQLANGA-VYYDEEKHWKEVHDEKIKALEVII 63 +R+ + +G I ++ +K Q+ + K + + K++ L ++ Sbjct: 690 RALERQGF---EGSQIAILDA---LLKLRQVCCDPRLVKGTTKTAQTMERAKLELLAGLL 743 Query: 64 EKA--NAAPIIVAYHFNSDLA---------RLQKAFPQGRTLDKDP-CTIQEWNEGK--- 108 ++V F L L G+T + ++++ Sbjct: 744 PTLVDEGRRMLVFSQFTEMLMLVAEQLDTLALPYLTLTGQTPPRQRGAVVRQFQAQDETS 803 Query: 109 IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVY 168 P+L + G GLNL + +V WW+ +Q R + G + VFVY Sbjct: 804 APILLVSLKAGGLGLNLT-AADTVVHLDPWWNPAVEEQATAR-----AHRIGQDQPVFVY 857 Query: 169 YLIAQNTIDELVLQRLRTKSTIQDLLL 195 L+ + +I+E +L+ K+ + +L Sbjct: 858 KLVVEGSIEERMLELQARKAALAQGVL 884 >gi|218666513|ref|YP_002425806.1| helicase, SNF2/RAD54 family [Acidithiobacillus ferrooxidans ATCC 23270] gi|218518726|gb|ACK79312.1| helicase, SNF2/RAD54 family [Acidithiobacillus ferrooxidans ATCC 23270] Length = 1381 Score = 119 bits (299), Expect = 2e-25, Method: Composition-based stats. Identities = 37/211 (17%), Positives = 71/211 (33%), Gaps = 26/211 (12%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSA-----SKTVKCLQLANGAVYYDEEKHWKEVHDEKI 56 Y +R+ + + ++ + A ++ K + A K+ Sbjct: 1153 AHYEALRRQAIVEAEAAIAQSGSQAHFHILAQLTKLRRAACDPRLVSPNLDIVG---AKV 1209 Query: 57 KALEVIIE--KANAAPIIVAYHFNSDLARLQ----------KAFPQGRTLDKDPCTIQEW 104 + + AN +V F L L+ + + I+++ Sbjct: 1210 RTFADLAGDLSANGHKALVFSQFVDFLTLLREPLDAAGIPYQYLDGSTPVADRERRIRDF 1269 Query: 105 NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA 164 K L + G GLNL + ++ WW+ Q + R + G R Sbjct: 1270 QAEKGNLFLISLKAGGFGLNLT-AADYVIITDPWWNPAAEDQAMGR-----AHRIGQLRP 1323 Query: 165 VFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 V VY L+AQ T++E ++ K + D +L Sbjct: 1324 VTVYRLVAQGTLEEQIIALHHDKRALADGVL 1354 >gi|299755713|ref|XP_001828834.2| DNA ATP-dependent helicase [Coprinopsis cinerea okayama7#130] gi|298411348|gb|EAU92841.2| DNA ATP-dependent helicase [Coprinopsis cinerea okayama7#130] Length = 1625 Score = 119 bits (299), Expect = 2e-25, Method: Composition-based stats. Identities = 31/157 (19%), Positives = 65/157 (41%), Gaps = 19/157 (12%) Query: 52 HDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQK----------AFPQGRTLDKDPC 99 K+ L+ ++++ A ++V + + +++ L+ Sbjct: 1352 DSAKLARLDSLLQELKAGDHRVLVYFQMTRMMDLMEEYLIYRQYKYLRLDGSSKLEDRRD 1411 Query: 100 TIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQ 158 + +W I + + G G+NL + ++F+ W+ Q ++R + Sbjct: 1412 MVIDWQTRPDIFVFLLSTRAGGLGINLT-AADTVIFYDHDWNPSNDAQAMDR-----AHR 1465 Query: 159 AGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 G R V VY LI + TIDE ++Q R K +QD+++ Sbjct: 1466 LGQTRQVTVYRLITKGTIDERIIQLARVKKDVQDIVV 1502 >gi|229169956|ref|ZP_04297649.1| Helicase, SNF2/RAD54 [Bacillus cereus AH621] gi|228613474|gb|EEK70606.1| Helicase, SNF2/RAD54 [Bacillus cereus AH621] Length = 855 Score = 119 bits (299), Expect = 2e-25, Method: Composition-based stats. Identities = 38/212 (17%), Positives = 80/212 (37%), Gaps = 23/212 (10%) Query: 3 QYHKFQRELYCDLQG-ENIEAFN-SASKTVKCLQLANGAVYYDEEKHWKEVHDE--KIKA 58 Y + ++ +++G IE K Q+ N Y +E+ + + + K K Sbjct: 632 LYEQLVQDTLQNVEGLSGIERRGFILLMLNKLKQICNHPALYLKEEEPQNIVERSMKTKT 691 Query: 59 LEVIIE--KANAAPIIVAYHFNSDLARLQKAFPQ-----------GRTLDKDPCTIQEWN 105 + +IE K ++ + L+ + + I+++ Sbjct: 692 VMELIENIKDQNESCLIFTQYIGMGNMLKSMLEETFGQRVLFLNGSVPKKERDKMIEQFQ 751 Query: 106 EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 G + + G GLNL N ++ + WW+ Q +R + G KR V Sbjct: 752 NGTYDIFILSLKAGGTGLNLT-AANHVIHYDRWWNPAVENQATDR-----AYRIGQKRFV 805 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 V+ LI T++E + + L K ++ + ++ + Sbjct: 806 HVHKLITTGTLEEKIDEMLERKQSLNNAVITS 837 >gi|77405797|ref|ZP_00782881.1| Snf2 family protein [Streptococcus agalactiae H36B] gi|77175584|gb|EAO78369.1| Snf2 family protein [Streptococcus agalactiae H36B] Length = 1032 Score = 119 bits (299), Expect = 2e-25, Method: Composition-based stats. Identities = 37/185 (20%), Positives = 69/185 (37%), Gaps = 24/185 (12%) Query: 26 ASKTVKCLQLANGA-VYYDEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLA 82 S + Q+ + ++ D + K+++L ++ + N ++ F L Sbjct: 839 LSGITRLRQICDTPRLFMDYDGE-----SGKLESLRQLLTQIKENGHRALIFSQFRGMLD 893 Query: 83 RLQKAFP----------QGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNIL 132 ++ ++ + +N G + G GLNL G + + Sbjct: 894 IAEREMVAMGLTTYKITGSTPANERHEMTRAFNAGSKDAFLISLKAGGVGLNLT-GADTV 952 Query: 133 VFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQD 192 V LWW+ Q I R + G K V VY LI + TI+E +L+ TK + Sbjct: 953 VLIDLWWNPAVEMQAISR-----AHRLGQKENVEVYRLITRGTIEEKILEMQETKKHLVT 1007 Query: 193 LLLNA 197 +L+ Sbjct: 1008 TVLDG 1012 >gi|239826817|ref|YP_002949441.1| non-specific serine/threonine protein kinase [Geobacillus sp. WCH70] gi|239807110|gb|ACS24175.1| Non-specific serine/threonine protein kinase [Geobacillus sp. WCH70] Length = 933 Score = 119 bits (299), Expect = 2e-25, Method: Composition-based stats. Identities = 40/218 (18%), Positives = 78/218 (35%), Gaps = 33/218 (15%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANG--------AVYYDEEKHWKEVH- 52 Y + ++ E + N + LQ+ NG A+Y E + + Sbjct: 701 ALYEQLVQDTL-----ERAKDANPFQRRGLILQMLNGVKQICDHPALYLKERTPRRVLER 755 Query: 53 DEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQ-----------GRTLDKDPC 99 K+K L ++E+ AN ++ + +Q+ Sbjct: 756 SHKLKKLVELLEQIRANDESCLIFTQYVRMGDMIQQLLADLFDEPVLFLNGSVPKAARDR 815 Query: 100 TIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQA 159 ++++ + + P+ + G GLNL N ++ F WW+ Q +R + Sbjct: 816 MVEQFQKRQAPIFILSLKAGGTGLNLT-AANHVIHFDRWWNPAVENQATDR-----AYRI 869 Query: 160 GFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 G + V V+ LI TI+E + L K + D++ Sbjct: 870 GQTKFVHVHKLITTGTIEEKIDDMLEQKLALADVITEG 907 >gi|182419549|ref|ZP_02950797.1| DNA/RNA helicase, SNF2 [Clostridium butyricum 5521] gi|237667122|ref|ZP_04527106.1| Non-specific serine/threonine protein kinase [Clostridium butyricum E4 str. BoNT E BL5262] gi|182376584|gb|EDT74159.1| DNA/RNA helicase, SNF2 [Clostridium butyricum 5521] gi|237655470|gb|EEP53026.1| Non-specific serine/threonine protein kinase [Clostridium butyricum E4 str. BoNT E BL5262] Length = 1060 Score = 119 bits (299), Expect = 2e-25, Method: Composition-based stats. Identities = 43/205 (20%), Positives = 73/205 (35%), Gaps = 21/205 (10%) Query: 3 QYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVI 62 Y +E+ + E + S QL E + K + I Sbjct: 842 VYDACVKEIQDRINSEKMNNITIFSFLTTLRQLCLDPSLVTNEYN---GESGKFNEVLNI 898 Query: 63 IEKANAA-PIIVAYHFNS---------DLARLQKAFPQGRTLDKDP-CTIQEWNEGKIP- 110 I+K I++ F D ++Q + G ++E+N K Sbjct: 899 IKKDQKENKILLFSQFTKALKKLALKLDKEKIQYCYLDGSISSSARIKLVEEFNNDKNKR 958 Query: 111 LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYL 170 + + G GLNL N+++ F WW+ Q +R + G KR V V L Sbjct: 959 VFLISLKAGGTGLNLT-SANMVIHFDPWWNPSIEDQATDR-----AHRIGQKRDVEVIKL 1012 Query: 171 IAQNTIDELVLQRLRTKSTIQDLLL 195 IA+ TI+E ++ K + + +L Sbjct: 1013 IAKGTIEEKIVLLQEDKRNLINDVL 1037 >gi|330797148|ref|XP_003286624.1| hypothetical protein DICPUDRAFT_54372 [Dictyostelium purpureum] gi|325083372|gb|EGC36826.1| hypothetical protein DICPUDRAFT_54372 [Dictyostelium purpureum] Length = 1848 Score = 119 bits (298), Expect = 2e-25, Method: Composition-based stats. Identities = 33/163 (20%), Positives = 68/163 (41%), Gaps = 19/163 (11%) Query: 52 HDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQK----------AFPQGRTLDKDPC 99 K++ L+ +++ +++ F + L+ L+ Sbjct: 1508 DSGKLQVLDKLLKDLKEGGHRVLIYSQFTKMINILEDFMIYRKYKYLRLDGSSKLEDRRD 1567 Query: 100 TIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQ 158 + ++ + I +CG G+NL + +VF+ W+ +Q ++R + Sbjct: 1568 MVDDFQSDPSIFAFLLSTRACGIGINLT-SADTVVFYDSDWNPTVDEQAMDRC-----HR 1621 Query: 159 AGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 G +R V VY LI + TI+E +L+R + K IQ +++ K E Sbjct: 1622 LGQQRPVTVYRLITKGTIEEKILKRAKQKHHIQSIVITGGKFE 1664 >gi|77411931|ref|ZP_00788262.1| Snf2 family protein [Streptococcus agalactiae CJB111] gi|77162028|gb|EAO73008.1| Snf2 family protein [Streptococcus agalactiae CJB111] Length = 1032 Score = 119 bits (298), Expect = 2e-25, Method: Composition-based stats. Identities = 37/185 (20%), Positives = 69/185 (37%), Gaps = 24/185 (12%) Query: 26 ASKTVKCLQLANGA-VYYDEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLA 82 S + Q+ + ++ D + K+++L ++ + N ++ F L Sbjct: 839 LSGITRLRQICDTPRLFMDYDGE-----SGKLESLRQLLTQIKENGHRALIFSQFRGMLD 893 Query: 83 RLQKAFP----------QGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNIL 132 ++ ++ + +N G + G GLNL G + + Sbjct: 894 IAEREMVAMGLTTYKITGSTPANERHEMTRAFNAGSKDAFLISLKAGGVGLNLT-GADTV 952 Query: 133 VFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQD 192 V LWW+ Q I R + G K V VY LI + TI+E +L+ TK + Sbjct: 953 VLIDLWWNPAVEMQAISR-----AHRLGQKENVEVYRLITRGTIEEKILEMQETKKHLVT 1007 Query: 193 LLLNA 197 +L+ Sbjct: 1008 TVLDG 1012 >gi|189233685|ref|XP_970280.2| PREDICTED: similar to helicase [Tribolium castaneum] Length = 1427 Score = 119 bits (298), Expect = 3e-25, Method: Composition-based stats. Identities = 33/176 (18%), Positives = 72/176 (40%), Gaps = 21/176 (11%) Query: 44 EEKHWKEVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQKAF----------PQG 91 +K K+ L+ ++++ +++ + L++ Sbjct: 1064 PDKETLVTDSGKLSVLDGLLKRLKEEGHRVLIYSQMTKMIDLLEEYMWHRHHKYMRLDGS 1123 Query: 92 RTLDKDPCTIQEWNEG-KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 + + + ++ I + + G G+NL + ++F+ W+ QQ ++R Sbjct: 1124 SKISERRDMVADFQARTDIFVFLLSTRAGGLGINLT-AADTVIFYDSDWNPTVDQQAMDR 1182 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA--LKKETIH 204 + G + V VY LI + +I+E +LQR R KS IQ L+++ K +T+ Sbjct: 1183 -----AHRLGQTKQVTVYRLICKGSIEERILQRAREKSEIQKLVISGGNFKPDTLK 1233 >gi|321262603|ref|XP_003196020.1| ATPase; Ino80p [Cryptococcus gattii WM276] gi|317462495|gb|ADV24233.1| ATPase, putative; Ino80p [Cryptococcus gattii WM276] Length = 1813 Score = 119 bits (298), Expect = 3e-25, Method: Composition-based stats. Identities = 29/158 (18%), Positives = 65/158 (41%), Gaps = 19/158 (12%) Query: 51 VHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQK----------AFPQGRTLDKDP 98 V K+ L+ ++ + A +++ + + +++ + + Sbjct: 1498 VDSAKLARLDSLLRELKAGGHRVLLYFQMTKMMDLIEEYLIFRQYKYLRLDGSSPIAERR 1557 Query: 99 CTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 + W I + + G G+NL + ++F+ W+ Q ++R Sbjct: 1558 DMVTGWQTNPDIFVFCLSTRAGGLGINLT-AADTVIFYDHDWNPSSDAQAMDR-----AH 1611 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 + G + V VY L+A+ TI+E +LQ R K +QD+++ Sbjct: 1612 RVGQTKQVTVYRLVARGTIEERILQMARGKKDVQDVVV 1649 >gi|229063904|ref|ZP_04200205.1| Helicase, SNF2/RAD54 [Bacillus cereus AH603] gi|229136057|ref|ZP_04264813.1| Helicase, SNF2/RAD54 [Bacillus cereus BDRD-ST196] gi|228647378|gb|EEL03457.1| Helicase, SNF2/RAD54 [Bacillus cereus BDRD-ST196] gi|228716374|gb|EEL68082.1| Helicase, SNF2/RAD54 [Bacillus cereus AH603] Length = 855 Score = 119 bits (298), Expect = 3e-25, Method: Composition-based stats. Identities = 38/212 (17%), Positives = 80/212 (37%), Gaps = 23/212 (10%) Query: 3 QYHKFQRELYCDLQG-ENIEAFN-SASKTVKCLQLANGAVYYDEEKHWKEVHDE--KIKA 58 Y + ++ +++G IE K Q+ N Y +E+ + + + K K Sbjct: 632 LYEQLVQDTLQNVEGLSGIERRGFILLMLNKLKQICNHPALYLKEEEPQNIVERSMKTKT 691 Query: 59 LEVIIE--KANAAPIIVAYHFNSDLARLQKAFPQ-----------GRTLDKDPCTIQEWN 105 + +IE K ++ + L+ + + I+++ Sbjct: 692 VMELIENIKDQNESCLIFTQYIGMGNMLKSMLEETFGQRVLFLNGSVPKKERDKMIEQFQ 751 Query: 106 EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 G + + G GLNL N ++ + WW+ Q +R + G KR V Sbjct: 752 NGTYDIFILSLKAGGTGLNLT-AANHVIHYDRWWNPAVENQATDR-----AYRIGQKRFV 805 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 V+ LI T++E + + L K ++ + ++ + Sbjct: 806 HVHKLITTGTLEEKIDEMLERKQSLNNAVITS 837 >gi|22537758|ref|NP_688609.1| Snf2 family protein [Streptococcus agalactiae 2603V/R] gi|76787127|ref|YP_330236.1| Snf2 family protein [Streptococcus agalactiae A909] gi|76798459|ref|ZP_00780697.1| Snf2 family protein [Streptococcus agalactiae 18RS21] gi|77408487|ref|ZP_00785225.1| Snf2 family protein [Streptococcus agalactiae COH1] gi|22534649|gb|AAN00482.1|AE014265_11 Snf2 family protein [Streptococcus agalactiae 2603V/R] gi|76562184|gb|ABA44768.1| Snf2 family protein [Streptococcus agalactiae A909] gi|76586193|gb|EAO62713.1| Snf2 family protein [Streptococcus agalactiae 18RS21] gi|77172929|gb|EAO76060.1| Snf2 family protein [Streptococcus agalactiae COH1] Length = 1032 Score = 119 bits (298), Expect = 3e-25, Method: Composition-based stats. Identities = 37/185 (20%), Positives = 69/185 (37%), Gaps = 24/185 (12%) Query: 26 ASKTVKCLQLANGA-VYYDEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLA 82 S + Q+ + ++ D + K+++L ++ + N ++ F L Sbjct: 839 LSGITRLRQICDTPRLFMDYDGE-----SGKLESLRQLLTQIKENGHRALIFSQFRGMLD 893 Query: 83 RLQKAFP----------QGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNIL 132 ++ ++ + +N G + G GLNL G + + Sbjct: 894 IAEREMVAMGLTTYKITGSTPANERHEMTRAFNAGSKDAFLISLKAGGVGLNLT-GADTV 952 Query: 133 VFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQD 192 V LWW+ Q I R + G K V VY LI + TI+E +L+ TK + Sbjct: 953 VLIDLWWNPAVEMQAISR-----AHRLGQKENVEVYRLITRGTIEEKILEMQETKKHLVT 1007 Query: 193 LLLNA 197 +L+ Sbjct: 1008 TVLDG 1012 >gi|19173110|ref|NP_597661.1| similarity to HELICASE MOT1 [Encephalitozoon cuniculi GB-M1] gi|19168777|emb|CAD26296.1| similarity to HELICASE MOT1 [Encephalitozoon cuniculi GB-M1] Length = 1256 Score = 119 bits (298), Expect = 3e-25, Method: Composition-based stats. Identities = 50/216 (23%), Positives = 89/216 (41%), Gaps = 30/216 (13%) Query: 2 KQYHKFQ----RELY--CDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEK 55 K Y + +E +L+ ++ N K + L LA + + ++ K Sbjct: 1028 KLYREIDEKGGKESLGDAELEYGKVDQKNVGFKRTRDLFLAVSHIGHFKDSTEV---SCK 1084 Query: 56 IKALEVIIE----KANAAPIIVAYHFNSDLARL------QKAFPQGRTLDKDP-----CT 100 +KALE II + + I++ + F S + + + F R P Sbjct: 1085 VKALEDIISLCGGEDLGSKILIFFQFKSTIDLVIKDIMKKYKFKYSRLDGSVPSAARTKI 1144 Query: 101 IQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 +E+N G +LF G GLNL G + +V + W+ Q ++R + G Sbjct: 1145 AEEFNTGTTQMLFLTTQVGGLGLNLT-GADTVVMYEHDWNPFNDLQAMDR-----AHRIG 1198 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 KR V V+ IA+NT++E V+ K + + L++ Sbjct: 1199 QKRTVNVFRFIARNTLEEKVMNLQSFKMFVANSLVS 1234 >gi|225174512|ref|ZP_03728511.1| Non-specific serine/threonine protein kinase [Dethiobacter alkaliphilus AHT 1] gi|225170297|gb|EEG79092.1| Non-specific serine/threonine protein kinase [Dethiobacter alkaliphilus AHT 1] Length = 1185 Score = 119 bits (298), Expect = 3e-25, Method: Composition-based stats. Identities = 46/212 (21%), Positives = 81/212 (38%), Gaps = 22/212 (10%) Query: 2 KQYHKF-QRELYCDLQGENIEAFN-SASKTVKCLQLANGAVYYDEEKHWKEVHDEK---- 55 Y + +RE+ + +E + Q+ N V++ + + K Sbjct: 958 ALYQQIVEREMSAVSESSGMERRGRILALMTSLKQICNHPVHFSKNGAPYPQNSGKAQLA 1017 Query: 56 IKALEVIIEKANAAPIIVAYHFNSD-LARLQKA--------FPQGRTLDKDPCTIQEW-N 105 + L I++ A I Y D L R+ +A F T + I+E+ N Sbjct: 1018 FQLLRQILQDGEKALIFTQYKQMGDILIRMLEAELNQPLPFFHGSLTPKQREQRIEEFQN 1077 Query: 106 EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 PL+ + G GLNL ++L + LWW+ Q +R + G + V Sbjct: 1078 NPHTPLMVVSLKAGGTGLNLTAATHVL-HYDLWWNPAVEDQATDR-----AYRIGQTKNV 1131 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 V+ I T++E + L K + DL ++A Sbjct: 1132 TVHRFITLGTLEEKIDTILTAKKDLADLTISA 1163 >gi|239983251|ref|ZP_04705775.1| SNF2/RAD54 family helicase [Streptomyces albus J1074] Length = 616 Score = 119 bits (298), Expect = 3e-25, Method: Composition-based stats. Identities = 35/208 (16%), Positives = 73/208 (35%), Gaps = 21/208 (10%) Query: 3 QYHKFQRELYCDLQGENIEAFNSASK--TVKCLQLANGAVYYDEEKHWK-EVHDEKIKAL 59 Y RE ++ A Q+ N + +E + E K+ L Sbjct: 390 LYEAVVRESMAAIERSEGIARRGLVLKLLTSLKQICNHPAQFLKESPARLEGRSGKLALL 449 Query: 60 EVIIEKA--NAAPIIVAYHFNSDLARL----------QKAFPQGRTLDKDPCTIQEWNEG 107 + +++ +V + + + + + + + EG Sbjct: 450 DELLDTLLAEDCSALVFTQYVGMAKLIGAHLAARAVPAELLHGATPVAERERMVDRFQEG 509 Query: 108 KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFV 167 + P+L + G GLNL + + + WW+ +Q +R + G R V V Sbjct: 510 RTPVLVLSLKAAGTGLNLTRASH-VFHYDRWWNPAVEEQATDR-----AYRIGQTRPVQV 563 Query: 168 YYLIAQNTIDELVLQRLRTKSTIQDLLL 195 + LI + T+++ + + L K + D +L Sbjct: 564 HRLITEGTVEDRIAELLTAKRALADAVL 591 >gi|320533736|ref|ZP_08034345.1| hypothetical protein HMPREF9057_02235 [Actinomyces sp. oral taxon 171 str. F0337] gi|320134049|gb|EFW26388.1| hypothetical protein HMPREF9057_02235 [Actinomyces sp. oral taxon 171 str. F0337] Length = 199 Score = 119 bits (298), Expect = 3e-25, Method: Composition-based stats. Identities = 25/156 (16%), Positives = 57/156 (36%), Gaps = 16/156 (10%) Query: 52 HDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTLDK--------DPCTI 101 KI+ L ++ + ++ F L+ +++ I Sbjct: 37 PSAKIQVLLEHLDPIISEGHRALIFSQFTRYLSGVREHLEAAGVRTTYLDGSTPDRQRVI 96 Query: 102 QEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGF 161 + G+ + + G GL L + + WW+ + +Q ++R + G Sbjct: 97 DAFRAGQADVFLISLKAGGFGLTLTE-ADYVFLLDPWWNPQAEEQAVDR-----THRIGQ 150 Query: 162 KRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + V VY L++ +TI+E V+ K+ + ++ Sbjct: 151 DKPVMVYRLVSADTIEEKVMALKEKKAELFARVVEG 186 >gi|16080681|ref|NP_391509.1| ATP-binding SNF2 helicase or protein kinase [Bacillus subtilis subsp. subtilis str. 168] gi|221311584|ref|ZP_03593431.1| hypothetical protein Bsubs1_19616 [Bacillus subtilis subsp. subtilis str. 168] gi|221315911|ref|ZP_03597716.1| hypothetical protein BsubsN3_19532 [Bacillus subtilis subsp. subtilis str. NCIB 3610] gi|221320824|ref|ZP_03602118.1| hypothetical protein BsubsJ_19485 [Bacillus subtilis subsp. subtilis str. JH642] gi|221325110|ref|ZP_03606404.1| hypothetical protein BsubsS_19646 [Bacillus subtilis subsp. subtilis str. SMY] gi|81345827|sp|P94593|YWQA_BACSU RecName: Full=Uncharacterized ATP-dependent helicase ywqA gi|2636153|emb|CAB15645.1| putative ATP-binding SNF2 helicase or protein kinase [Bacillus subtilis subsp. subtilis str. 168] Length = 922 Score = 119 bits (298), Expect = 3e-25, Method: Composition-based stats. Identities = 38/213 (17%), Positives = 83/213 (38%), Gaps = 25/213 (11%) Query: 3 QYHKFQRELY---CDLQGENIEAFNSASKTVKCLQLANG-AVY-YDEEKHWKEVHDEKIK 57 Y + ++ + L G +A S + Q+ + A+Y +E+ K++ Sbjct: 694 LYEQLVKDTFDHMTSLTGMQRKAL-ILSMLGRLKQICDHPALYLKEEQTELLAGRSVKLE 752 Query: 58 ALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQG---------RTLDKDPCT--IQEW 104 L ++ A ++ + +++ + +L K ++++ Sbjct: 753 KLLELMTAIRAQNESCLIFTQYIQMGNMMKRLLEKTFGEPVQFLNGSLSKQERDTLVEKF 812 Query: 105 NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA 164 + P L + G GLNL N ++ + WW+ Q +R + G +R Sbjct: 813 QRKEYPTLILSLKAGGTGLNLT-AANHVIHYDRWWNPAVENQATDR-----AYRIGQERF 866 Query: 165 VFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 V V+ +I TI+E + L +K T+ D ++ + Sbjct: 867 VHVHKMITTGTIEEKIDVMLESKQTLNDQIIQS 899 >gi|150015858|ref|YP_001308112.1| non-specific serine/threonine protein kinase [Clostridium beijerinckii NCIMB 8052] gi|149902323|gb|ABR33156.1| Non-specific serine/threonine protein kinase [Clostridium beijerinckii NCIMB 8052] Length = 979 Score = 119 bits (298), Expect = 3e-25, Method: Composition-based stats. Identities = 38/209 (18%), Positives = 80/209 (38%), Gaps = 22/209 (10%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEV 61 Y + + + ++ S K ++ E+ + KI+ + Sbjct: 757 AVYSNYVKRVKAAMKNNKDGRIEIFSYLTKLREICLDPSLILEDYN---GGSGKIEEVVE 813 Query: 62 IIEK--ANAAPIIVAYHFNSDLARLQKAFPQ---------GRTLDKDP-CTIQEWNEGK- 108 II+ + I++ F S L R+ + G+T K+ ++++N + Sbjct: 814 IIKNHIDSGGKILLFSQFTSALDRIGDRLNKEKIEFFHLSGKTNPKNRIKMVKDFNTNEF 873 Query: 109 IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVY 168 + + + G GLNL N+++ F WW+ Q +R + G + V V Sbjct: 874 VNVFLISLKAGGTGLNLT-SANLVIHFDPWWNPAVEAQATDR-----AHRIGQRDVVEVI 927 Query: 169 YLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 L+++ TI+E ++ K + D +L Sbjct: 928 KLVSKGTIEEKIILLQEDKKQLIDSILTG 956 >gi|321313173|ref|YP_004205460.1| putative ATP-binding SNF2 helicase or protein kinase [Bacillus subtilis BSn5] gi|320019447|gb|ADV94433.1| putative ATP-binding SNF2 helicase or protein kinase [Bacillus subtilis BSn5] Length = 922 Score = 119 bits (298), Expect = 3e-25, Method: Composition-based stats. Identities = 38/213 (17%), Positives = 83/213 (38%), Gaps = 25/213 (11%) Query: 3 QYHKFQRELY---CDLQGENIEAFNSASKTVKCLQLANG-AVY-YDEEKHWKEVHDEKIK 57 Y + ++ + L G +A S + Q+ + A+Y +E+ K++ Sbjct: 694 LYEQLVKDTFDHMTSLTGMQRKAL-ILSMLGRLKQICDHPALYLKEEQTELLAGRSVKLE 752 Query: 58 ALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQG---------RTLDKDPCT--IQEW 104 L ++ A ++ + +++ + +L K ++++ Sbjct: 753 KLLELMTAIRAQNESCLIFTQYIQMGNMMKRLLEKTFGEPVQFLNGSLSKQERDTLVEKF 812 Query: 105 NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA 164 + P L + G GLNL N ++ + WW+ Q +R + G +R Sbjct: 813 QRKEYPTLILSLKAGGTGLNLT-AANHVIHYDRWWNPAVENQATDR-----AYRIGQERF 866 Query: 165 VFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 V V+ +I TI+E + L +K T+ D ++ + Sbjct: 867 VHVHKMITTGTIEEKIDVMLESKQTLNDQIIQS 899 >gi|1763712|emb|CAB05939.1| ywqA [Bacillus subtilis subsp. subtilis str. 168] Length = 867 Score = 118 bits (297), Expect = 3e-25, Method: Composition-based stats. Identities = 38/213 (17%), Positives = 83/213 (38%), Gaps = 25/213 (11%) Query: 3 QYHKFQRELY---CDLQGENIEAFNSASKTVKCLQLANG-AVY-YDEEKHWKEVHDEKIK 57 Y + ++ + L G +A S + Q+ + A+Y +E+ K++ Sbjct: 639 LYEQLVKDTFDHMTSLTGMQRKAL-ILSMLGRLKQICDHPALYLKEEQTELLAGRSVKLE 697 Query: 58 ALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQG---------RTLDKDPCT--IQEW 104 L ++ A ++ + +++ + +L K ++++ Sbjct: 698 KLLELMTAIRAQNESCLIFTQYIQMGNMMKRLLEKTFGEPVQFLNGSLSKQERDTLVEKF 757 Query: 105 NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA 164 + P L + G GLNL N ++ + WW+ Q +R + G +R Sbjct: 758 QRKEYPTLILSLKAGGTGLNLT-AANHVIHYDRWWNPAVENQATDR-----AYRIGQERF 811 Query: 165 VFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 V V+ +I TI+E + L +K T+ D ++ + Sbjct: 812 VHVHKMITTGTIEEKIDVMLESKQTLNDQIIQS 844 >gi|291486201|dbj|BAI87276.1| hypothetical protein BSNT_05537 [Bacillus subtilis subsp. natto BEST195] Length = 922 Score = 118 bits (297), Expect = 3e-25, Method: Composition-based stats. Identities = 38/213 (17%), Positives = 83/213 (38%), Gaps = 25/213 (11%) Query: 3 QYHKFQRELY---CDLQGENIEAFNSASKTVKCLQLANG-AVY-YDEEKHWKEVHDEKIK 57 Y + ++ + L G +A S + Q+ + A+Y +E+ K++ Sbjct: 694 LYEQLVKDTFDHMTSLTGMQRKAL-ILSMLGRLKQICDHPALYLKEEQTELLAGRSVKLE 752 Query: 58 ALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQG---------RTLDKDPCT--IQEW 104 L ++ A ++ + +++ + +L K ++++ Sbjct: 753 KLLELMTAIRAQNESCLIFTQYIQMGNMMKRLLEKTFGEPVQFLNGSLSKQERDTLVEKF 812 Query: 105 NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA 164 + P L + G GLNL N ++ + WW+ Q +R + G +R Sbjct: 813 QRKEYPTLILSLKAGGTGLNLT-AANHVIHYDRWWNPAVENQATDR-----AYRIGQERF 866 Query: 165 VFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 V V+ +I TI+E + L +K T+ D ++ + Sbjct: 867 VHVHKMITTGTIEEKIDVMLESKQTLNDQIIQS 899 >gi|322806869|emb|CBZ04439.1| hypothetical protein H04402_02632 [Clostridium botulinum H04402 065] Length = 366 Score = 118 bits (297), Expect = 3e-25, Method: Composition-based stats. Identities = 39/202 (19%), Positives = 86/202 (42%), Gaps = 23/202 (11%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEV 61 K+Y KF+++ + + S +K + QLA+ + + K+ +L+ Sbjct: 182 KEYKKFKKDRLITINNTELVGDTSLTKMLYLRQLAS------------QYNPNKLSSLKD 229 Query: 62 IIEKANAAPIIVAYHFNSDLARLQ----KAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPA 117 +E +I+ Y+F ++ +++ + ++ ++ + ++ Sbjct: 230 SLESTEDR-VIIFYNFTEEMKQIKEVCGRLEKPVSIVNGQTKDLENYKTKDNAVVLVQYQ 288 Query: 118 SCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 + GLNLQ N +V++SL E +Q +R + G R +YLI +N+I+ Sbjct: 289 AGAMGLNLQLS-NKIVYYSLPLASELFEQSKKR-----THRIGQTRTCMYWYLITKNSIE 342 Query: 178 ELVLQRLRTKSTIQDLLLNALK 199 E + + L+ + D L L+ Sbjct: 343 EQIFETLKERKDFTDKLFEELE 364 >gi|291455081|ref|ZP_06594471.1| LOW QUALITY PROTEIN: SNF2/RAD54 family helicase [Streptomyces albus J1074] gi|291358030|gb|EFE84932.1| LOW QUALITY PROTEIN: SNF2/RAD54 family helicase [Streptomyces albus J1074] Length = 690 Score = 118 bits (297), Expect = 3e-25, Method: Composition-based stats. Identities = 35/208 (16%), Positives = 73/208 (35%), Gaps = 21/208 (10%) Query: 3 QYHKFQRELYCDLQGENIEAFNSASK--TVKCLQLANGAVYYDEEKHWK-EVHDEKIKAL 59 Y RE ++ A Q+ N + +E + E K+ L Sbjct: 464 LYEAVVRESMAAIERSEGIARRGLVLKLLTSLKQICNHPAQFLKESPARLEGRSGKLALL 523 Query: 60 EVIIEKA--NAAPIIVAYHFNSDLARL----------QKAFPQGRTLDKDPCTIQEWNEG 107 + +++ +V + + + + + + + EG Sbjct: 524 DELLDTLLAEDCSALVFTQYVGMAKLIGAHLAARAVPAELLHGATPVAERERMVDRFQEG 583 Query: 108 KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFV 167 + P+L + G GLNL + + + WW+ +Q +R + G R V V Sbjct: 584 RTPVLVLSLKAAGTGLNLTRASH-VFHYDRWWNPAVEEQATDR-----AYRIGQTRPVQV 637 Query: 168 YYLIAQNTIDELVLQRLRTKSTIQDLLL 195 + LI + T+++ + + L K + D +L Sbjct: 638 HRLITEGTVEDRIAELLTAKRALADAVL 665 >gi|163751389|ref|ZP_02158614.1| hypothetical protein KT99_01444 [Shewanella benthica KT99] gi|161328692|gb|EDP99840.1| hypothetical protein KT99_01444 [Shewanella benthica KT99] Length = 1004 Score = 118 bits (297), Expect = 3e-25, Method: Composition-based stats. Identities = 36/212 (16%), Positives = 72/212 (33%), Gaps = 25/212 (11%) Query: 3 QYHKFQRELYCDLQGENIE---AFNSASKTVKCLQLANGAVYY-DEEKHWKEVHDEKIKA 58 Y E+ ++ S ++ Q N + + K++ Sbjct: 774 IYQSIVDEITTQMEQTQESQGQKVIMLSALLRLKQCCNHPAQVLQDGSEFSIERSIKLQR 833 Query: 59 LEVIIEKA--NAAPIIVAYHFNSDLARLQKAFP-----------QGRTLDKDPCTIQEWN 105 L ++A N I++ F +++QK + + IQ++ Sbjct: 834 LVETCKEAIGNNESILIFSQFTEVCSQIQKILKNQLGFQTYYLHGATSRKRREQMIQQFQ 893 Query: 106 EGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKR 163 P + + G G+ L N ++ F WW+ Q +R + G ++ Sbjct: 894 AEDSPPAVFILSLKAGGVGITLTK-ANHVIHFDRWWNPAVEDQATDR-----AYRIGQQK 947 Query: 164 AVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 VF + I TI+E + + L K I D ++ Sbjct: 948 TVFAHKFITLGTIEEKIDKMLEDKKKIADSII 979 >gi|121604005|ref|YP_981334.1| SNF2-like protein [Polaromonas naphthalenivorans CJ2] gi|120592974|gb|ABM36413.1| SNF2-related protein [Polaromonas naphthalenivorans CJ2] Length = 899 Score = 118 bits (297), Expect = 3e-25, Method: Composition-based stats. Identities = 36/212 (16%), Positives = 71/212 (33%), Gaps = 22/212 (10%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKT--VKCLQLANGAVYYDEEKHWKEVHDEKIKAL 59 Y L L+ + ++ Q+ N + + WK K L Sbjct: 666 ALYQDAVHNLAAALEDAEGIGRKGLVLSFLMRFKQICNHPSQWLGDGAWKAQDSGKFARL 725 Query: 60 EVIIE--KANAAPIIVAYHFNSDLARLQKAFP-----------QGRTLDKDPCTIQEWNE 106 ++E A ++V F L G + + ++ + E Sbjct: 726 RELVEVIAAKQEKVLVFTQFRETTEPLAAFLGSIFGREGLVLHGGTPVARRRELVRRFQE 785 Query: 107 GKI-PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 + P + G GLNL + ++ F WW+ Q +R + G +R V Sbjct: 786 DEQTPFFVLSLKAGGAGLNLT-AASHVIHFDRWWNPAVENQATDR-----AFRIGQQRNV 839 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 V+ I + T+++ + Q + +K + +L Sbjct: 840 LVHKFICRGTVEDRIDQLIESKQQLVQDVLEG 871 >gi|197118846|ref|YP_002139273.1| helicase [Geobacter bemidjiensis Bem] gi|197088206|gb|ACH39477.1| helicase, putative [Geobacter bemidjiensis Bem] Length = 1120 Score = 118 bits (297), Expect = 4e-25, Method: Composition-based stats. Identities = 33/191 (17%), Positives = 72/191 (37%), Gaps = 22/191 (11%) Query: 25 SASKTVKCLQ--LANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLA 82 + + +K Q L++ + ++ D + L + A ++V F S L Sbjct: 925 ALTAILKLRQICLSSKLILPQAPDRSPKI-DFLVDQLMELF--AEGHSVLVFSQFTSFLD 981 Query: 83 RLQKAFPQ----------GRTLDKDPCTIQEWNEGKIP-LLFAHPASCGHGLNLQYGGNI 131 +++ Q + + +Q + E P + + G GLNL + Sbjct: 982 IVEQGLSQHGIGFSRLDGSTPVSRRKEMVQRFQESAEPGVFLLSLKAGGRGLNLTR-ASY 1040 Query: 132 LVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQ 191 + WW+ Q +R + G +R V + L+ +++I+E +++ + K + Sbjct: 1041 VFHLDPWWNPAVESQASDR-----AHRIGQQRQVTITRLLMRHSIEEKMMELKKRKLKLY 1095 Query: 192 DLLLNALKKET 202 LL + E Sbjct: 1096 RALLEEAEHEG 1106 >gi|253583434|ref|ZP_04860632.1| non-specific serine/threonine protein kinase [Fusobacterium varium ATCC 27725] gi|251834006|gb|EES62569.1| non-specific serine/threonine protein kinase [Fusobacterium varium ATCC 27725] Length = 1022 Score = 118 bits (297), Expect = 4e-25, Method: Composition-based stats. Identities = 37/199 (18%), Positives = 79/199 (39%), Gaps = 34/199 (17%) Query: 29 TVKCLQLANG-----AVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLAR 83 + QL N A Y E + + + + K+ +++ F L+ Sbjct: 832 LTRLRQLCNHPKLFLADYDGESSKLEALLELLEEC------KSGGHRVLLFSQFTEMLSI 885 Query: 84 LQKAFPQ--------GRTLDKDP-CTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVF 134 +++ P+ G+T + ++ +N G+ + + G GLNL G + ++ Sbjct: 886 IKENIPKDMTYLYLDGKTKSEHRMELVERFNSGEGDIFIISLKAGGSGLNLT-GADTVIH 944 Query: 135 FSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTI---- 190 F WW+ Q +R + G + V V+ +IA+ TI+E + K + Sbjct: 945 FDPWWNSSVENQATDR-----AYRMGQTKNVNVFKMIAKGTIEEKINIIKDEKEKLIREI 999 Query: 191 ----QDLLLNALKKETIHV 205 Q+ +++ KK+ + + Sbjct: 1000 LDEKQENIISMTKKDILEL 1018 >gi|323144713|ref|ZP_08079295.1| SNF2 family N-terminal domain protein [Succinatimonas hippei YIT 12066] gi|322415530|gb|EFY06282.1| SNF2 family N-terminal domain protein [Succinatimonas hippei YIT 12066] Length = 1337 Score = 118 bits (297), Expect = 4e-25, Method: Composition-based stats. Identities = 43/210 (20%), Positives = 76/210 (36%), Gaps = 22/210 (10%) Query: 2 KQYHKFQRELYCDLQGENIEAF-NSASKTVKCLQLANG-AVYYDEEKHWKEVHDEK---- 55 Y E L + N + Q+ + AVY + H K K Sbjct: 1109 ALYQAKLDESLNKLSSDVKSKMINVITTINALKQICDSPAVYDEGNSHNKPEDSGKSVAV 1168 Query: 56 IKALEVIIEKANAAPIIVAY--------HFNSDLARLQKAFPQGRT-LDKDPCTIQEW-N 105 + LE I+++ I Y + D + F G T L + I + N Sbjct: 1169 LDLLENILDQGKKTIIFTQYLKMGYLLKQYIKDKFAIDADFLTGETTLKERQNMIDSFQN 1228 Query: 106 EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 + +L + G G+NL ++++ F LWW+ Q +R + G + V Sbjct: 1229 DPDKSILILSLKAGGSGINLT-AASVVIHFDLWWNPAVENQATDR-----AYRIGQNKTV 1282 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 VY ++ T++E + L K + +L + Sbjct: 1283 QVYRMLCSGTLEENIDATLSMKKELNELTV 1312 >gi|225164937|ref|ZP_03727151.1| Non-specific serine/threonine protein kinase [Opitutaceae bacterium TAV2] gi|224800459|gb|EEG18841.1| Non-specific serine/threonine protein kinase [Opitutaceae bacterium TAV2] Length = 940 Score = 118 bits (296), Expect = 4e-25, Method: Composition-based stats. Identities = 39/217 (17%), Positives = 73/217 (33%), Gaps = 24/217 (11%) Query: 3 QYHKFQRELYCDLQGENIEAFNS-----ASKTVKCLQLANGAVYYDEEKHWKEVHDEKIK 57 +Y + E L + A + + Q+ K + KI Sbjct: 703 EYARICAEGLQRLGDDVSAAIREKSFGLLALLTRLRQVCCDPDMLPWIKDARLADSGKIS 762 Query: 58 ALEVIIEK--ANAAPIIVAYHFNSDLARLQKAF-----------PQGRTLDKDPCTIQEW 104 L + + AN +++ F L R++ A G TLD+ Sbjct: 763 LLIERLAEVIANGHKVVIFSQFVMLLNRVRDALAHSFPDLPRYELTGMTLDRLKPVQGFQ 822 Query: 105 NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA 164 N + + G G+ L + + + WW+ Q ++R+ + G Sbjct: 823 NADGAAAMLVSLKAAGTGITL-HSADYVFLLDPWWNPAVEAQAVDRV-----HRIGQTST 876 Query: 165 VFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 VFVY ++ TI+E + +K + D L+ L + Sbjct: 877 VFVYRMVTAGTIEERIEALKASKRDLFDKLIGGLGGD 913 >gi|322419839|ref|YP_004199062.1| SNF2-like protein [Geobacter sp. M18] gi|320126226|gb|ADW13786.1| SNF2-related protein [Geobacter sp. M18] Length = 1124 Score = 118 bits (296), Expect = 4e-25, Method: Composition-based stats. Identities = 33/194 (17%), Positives = 73/194 (37%), Gaps = 22/194 (11%) Query: 25 SASKTVKCLQ--LANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLA 82 + + +K Q L + + D ++ + + L+ + A ++V F S L Sbjct: 929 ALTAILKLRQICLCSRLILPDATDRSPKI-EFLVDQLQELF--AEGHSVLVFSQFTSFLD 985 Query: 83 RLQKAFPQ----------GRTLDKDPCTIQEWNEGKIP-LLFAHPASCGHGLNLQYGGNI 131 +Q+ Q + + +Q + + P + + G GLNL + Sbjct: 986 IVQQGLAQHGITSSRLDGTTPVGRRKELVQNFQDSVEPGVFLLSLKAGGRGLNLTR-ASY 1044 Query: 132 LVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQ 191 + WW+ Q +R + G KR V + L+ +++I+E +++ + K + Sbjct: 1045 VFHLDPWWNPAVESQASDR-----AHRIGQKRQVTITRLLMRHSIEEKMMELKKRKLKLY 1099 Query: 192 DLLLNALKKETIHV 205 LL + + Sbjct: 1100 RALLEDAEHQGAAT 1113 >gi|253700371|ref|YP_003021560.1| SNF2-related protein [Geobacter sp. M21] gi|251775221|gb|ACT17802.1| SNF2-related protein [Geobacter sp. M21] Length = 1120 Score = 118 bits (296), Expect = 4e-25, Method: Composition-based stats. Identities = 33/191 (17%), Positives = 73/191 (38%), Gaps = 22/191 (11%) Query: 25 SASKTVKCLQ--LANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLA 82 + + +K Q L++ + ++ D + L+ + A ++V F S L Sbjct: 925 ALTAILKLRQICLSSKLILPQAPDRSPKI-DFLVDQLQELF--AEGHSVLVFSQFTSFLD 981 Query: 83 RLQKAFPQ----------GRTLDKDPCTIQEWNEGKIP-LLFAHPASCGHGLNLQYGGNI 131 +++ Q + + +Q + E P + + G GLNL + Sbjct: 982 IVEQGLSQHGIGFSRLDGSTPVSRRKEMVQRFQESAEPGVFLLSLKAGGRGLNLTR-ASY 1040 Query: 132 LVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQ 191 + WW+ Q +R + G +R V + L+ +++I+E +++ + K + Sbjct: 1041 VFHLDPWWNPAVESQASDR-----AHRIGQQRQVTITRLLMRHSIEEKMMELKKRKLKLY 1095 Query: 192 DLLLNALKKET 202 LL + E Sbjct: 1096 RALLEEAEHEG 1106 >gi|85014495|ref|XP_955743.1| transcriptional activator [Encephalitozoon cuniculi GB-M1] gi|19171437|emb|CAD27162.1| GLOBAL TRANSCRIPTIONAL ACTIVATOR (SNF2/RAD54 family) [Encephalitozoon cuniculi GB-M1] Length = 883 Score = 118 bits (296), Expect = 4e-25, Method: Composition-based stats. Identities = 32/158 (20%), Positives = 65/158 (41%), Gaps = 18/158 (11%) Query: 52 HDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFP-QGRTLDK---------DPC 99 K+ L+ ++ K A +++ + + ++ +G T + Sbjct: 724 DSGKLVVLDELLPKLKAEGHRLLMYFQMTRMIDLIEDYLVRKGYTYLRLDGSLKASARAE 783 Query: 100 TIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQA 159 I++W + + G G+NL + +VF+ W+ QQ ++R + Sbjct: 784 VIRDWQASDKFIFLLSTRAGGLGINLT-AADTVVFYDSDWNPTADQQAMDR-----AHRL 837 Query: 160 GFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 G R V VY LI + T++E VL+ K IQ ++++ Sbjct: 838 GQTRDVTVYRLITRGTVEEKVLESANRKDEIQKMVIHG 875 >gi|242040921|ref|XP_002467855.1| hypothetical protein SORBIDRAFT_01g035270 [Sorghum bicolor] gi|241921709|gb|EER94853.1| hypothetical protein SORBIDRAFT_01g035270 [Sorghum bicolor] Length = 1478 Score = 118 bits (296), Expect = 4e-25, Method: Composition-based stats. Identities = 29/160 (18%), Positives = 70/160 (43%), Gaps = 19/160 (11%) Query: 51 VHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAF----------PQGRTLDKDP 98 K+ L++++ + + +++ L L+ + Sbjct: 1150 TDSGKLHTLDMLLRRLRSEGHRVLLFAQMTKMLDILEDYMNFRKFKYFRLDGSSAISDRR 1209 Query: 99 CTIQEW-NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 ++++ N + + + G G+NL + ++F+ + W+ + QQ ++R Sbjct: 1210 DMVRDFQNRNDVFVFLLSTRAGGLGINLT-AADTVIFYEIDWNPTQDQQAMDR-----TH 1263 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + G + V VY LI ++TI+E +LQR + K+ +Q+L++ Sbjct: 1264 RLGQTKEVTVYRLICKDTIEEKILQRAKQKNAVQELVMKG 1303 >gi|329767794|ref|ZP_08259310.1| hypothetical protein HMPREF0428_01007 [Gemella haemolysans M341] gi|328838895|gb|EGF88489.1| hypothetical protein HMPREF0428_01007 [Gemella haemolysans M341] Length = 321 Score = 118 bits (296), Expect = 4e-25, Method: Composition-based stats. Identities = 41/203 (20%), Positives = 82/203 (40%), Gaps = 27/203 (13%) Query: 2 KQYHKFQRELYCDLQ-----GENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKI 56 K Y +F++ + + + + QLA+ ++E K Sbjct: 132 KHYKEFEKHAVVEFKSKLFGEVEYVGDTQLKERLFLRQLAS---IHNENKK--------- 179 Query: 57 KALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTL---DKDPCTIQEWNEGKIPLLF 113 + L+ II +I+ Y+FN + ++ P+ R + + + + +N + Sbjct: 180 EKLKDIINSTEGR-LIIFYNFNHEKEAIKSCIPKDRPISYVNGELVDKENYNNADNSITL 238 Query: 114 AHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQ 173 + G N+Q N L+F+S E++ Q I+RI + G ++ F Y L+ Q Sbjct: 239 MQYQAGAKGHNMQK-ANHLIFYSPTEKCEDYMQSIKRI-----HRIGQEKPCFYYKLVVQ 292 Query: 174 NTIDELVLQRLRTKSTIQDLLLN 196 N+I+E + + L + L N Sbjct: 293 NSIEEDIYKALERGEDYTNELFN 315 >gi|58266666|ref|XP_570489.1| hypothetical protein [Cryptococcus neoformans var. neoformans JEC21] gi|134110324|ref|XP_775989.1| hypothetical protein CNBD0390 [Cryptococcus neoformans var. neoformans B-3501A] gi|74685408|sp|Q5KHM0|INO80_CRYNE RecName: Full=Putative DNA helicase INO80 gi|50258657|gb|EAL21342.1| hypothetical protein CNBD0390 [Cryptococcus neoformans var. neoformans B-3501A] gi|57226722|gb|AAW43182.1| conserved hypothetical protein [Cryptococcus neoformans var. neoformans JEC21] Length = 1765 Score = 118 bits (296), Expect = 5e-25, Method: Composition-based stats. Identities = 30/158 (18%), Positives = 65/158 (41%), Gaps = 19/158 (12%) Query: 51 VHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQK----------AFPQGRTLDKDP 98 V K+ L+ ++ + A +++ + + +++ + + Sbjct: 1450 VDSAKLARLDSLLRELKAGGHRVLLYFQMTKMMDLIEEYLIFRQYKYLRLDGSSPIAERR 1509 Query: 99 CTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 + W I + + G G+NL + ++F+ W+ Q ++R Sbjct: 1510 DMVTSWQTNPDIFVFCLSTRAGGLGINLT-AADTVIFYDHDWNPSSDAQAMDR-----AH 1563 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 + G + V VY L+A+ TI+E +LQ R K IQD+++ Sbjct: 1564 RVGQTKQVTVYRLVARGTIEERILQMARGKKDIQDVVV 1601 >gi|325261436|ref|ZP_08128174.1| helicase, SNF2/RAD54 family [Clostridium sp. D5] gi|324032890|gb|EGB94167.1| helicase, SNF2/RAD54 family [Clostridium sp. D5] Length = 871 Score = 118 bits (295), Expect = 5e-25, Method: Composition-based stats. Identities = 39/209 (18%), Positives = 76/209 (36%), Gaps = 26/209 (12%) Query: 7 FQRELYCDLQGENIEAFN------SASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 R++ DL+ + EA + +K Q+ N Y ++ + K L+ Sbjct: 646 LYRKVILDLENKLAEAEGIERCGLVLTSIMKLKQICNHPDQYMGQQTFALEDSGKFAMLK 705 Query: 61 VIIEK--ANAAPIIVAYHFNSDLARLQKAFP-----------QGRTLDKDPCTIQEWNEG 107 I E +++ F L G + K ++ + Sbjct: 706 EICETIYEKRERVLIFTQFKEITEYLGDFLKSIFKTEGYVLHGGTPVKKRSEIVEAFQGE 765 Query: 108 K-IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVF 166 K IP + + G GLNL N ++ F WW+ Q +R + G ++ V Sbjct: 766 KYIPYIVLSVKAGGTGLNLTK-ANHVIHFDRWWNPAVENQATDR-----AFRIGQEKNVM 819 Query: 167 VYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 V+ L+ TI+E + + +K + + ++ Sbjct: 820 VHKLVCTGTIEEKIDAMINSKKELAENVI 848 >gi|29348762|ref|NP_812265.1| Snf2 family helicase [Bacteroides thetaiotaomicron VPI-5482] gi|29340668|gb|AAO78459.1| Snf2 family helicase [Bacteroides thetaiotaomicron VPI-5482] Length = 1027 Score = 118 bits (295), Expect = 5e-25, Method: Composition-based stats. Identities = 32/177 (18%), Positives = 63/177 (35%), Gaps = 18/177 (10%) Query: 29 TVKCLQLANGA-VYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKA 87 ++ QLA + + + ++ I + + ++ +++ F L L + Sbjct: 840 ILRLRQLACHPQLIFPDFDGVSGKTEQIIDTFDTL--RSEGHKVLIFSSFVRHLEILAEV 897 Query: 88 FPQ---------GRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLW 138 F Q G T ++ + + + G GLNL + + W Sbjct: 898 FRQRGWKYALLTGSTNNRPSEIAHFTEQKDVQAFLISLKAGGVGLNLTQADYVFI-IDPW 956 Query: 139 WDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 W+ Q I R + G + V Y I QN+I+E +LQ K + + + Sbjct: 957 WNPAAESQAIAR-----AHRIGQDKQVIAYRFITQNSIEEKILQLQEDKRRLAETFI 1008 >gi|311742706|ref|ZP_07716515.1| SNF2/RAD54 family helicase [Aeromicrobium marinum DSM 15272] gi|311314334|gb|EFQ84242.1| SNF2/RAD54 family helicase [Aeromicrobium marinum DSM 15272] Length = 867 Score = 118 bits (295), Expect = 6e-25, Method: Composition-based stats. Identities = 31/145 (21%), Positives = 67/145 (46%), Gaps = 14/145 (9%) Query: 61 VIIEKANAAPIIVAY-HFNSDLAR------LQKAFPQGRT-LDKDPCTIQEWNEGKIPLL 112 I+ + AA + Y L+R + + G T + + +Q+++ G+ P+ Sbjct: 708 EIVAEDGAALVFTQYARMGHLLSRHLADRGIDHFYLHGGTPIPRRERMVQQFSAGEAPVF 767 Query: 113 FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIA 172 + G GLNL + ++ + WW+ Q +R + G ++V V+ L++ Sbjct: 768 VLSLKAAGTGLNLTR-ADHVIHYDRWWNPAVEDQATDR-----AHRIGQTKSVQVHRLMS 821 Query: 173 QNTIDELVLQRLRTKSTIQDLLLNA 197 + TI+E + + + +K + D ++NA Sbjct: 822 EGTIEESIAELIASKRALADAVVNA 846 >gi|37521987|ref|NP_925364.1| helicase [Gloeobacter violaceus PCC 7421] gi|35212986|dbj|BAC90359.1| gll2418 [Gloeobacter violaceus PCC 7421] Length = 1054 Score = 118 bits (295), Expect = 6e-25, Method: Composition-based stats. Identities = 36/211 (17%), Positives = 76/211 (36%), Gaps = 24/211 (11%) Query: 3 QYHKFQRELYCDLQGENIEAFNSASK--TVKCLQLANGAVYY-DEEKHWKEVHDEKIKAL 59 Y +E+ ++ A + Q+ N + + + + K+ L Sbjct: 822 LYAAVLKEVEAQIEQVEGIARKGLILATLTRLKQICNHPMQFLQDGSAFSPERSHKLCRL 881 Query: 60 EVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRT-----------LDKDPCTIQEWNE 106 + + E+ A ++V F+ A L++ F Q R +K I ++ + Sbjct: 882 DEMAEEVLAEGESLLVFTQFHEIGAALERHFRQVRRWGTYYIHGGVSREKREKLIADFQD 941 Query: 107 GKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA 164 + + G G+ L N + F WW+ Q +R + G + Sbjct: 942 PDSEPAVFILSLKAGGVGITLTR-ANHVFHFDRWWNPAVEDQATDR-----AFRIGQTKN 995 Query: 165 VFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 VFV+ +A T++E + + L K + ++ Sbjct: 996 VFVHKFVALGTLEERIDRMLEEKKRLASAIV 1026 >gi|164656581|ref|XP_001729418.1| hypothetical protein MGL_3453 [Malassezia globosa CBS 7966] gi|159103309|gb|EDP42204.1| hypothetical protein MGL_3453 [Malassezia globosa CBS 7966] Length = 1517 Score = 118 bits (295), Expect = 6e-25, Method: Composition-based stats. Identities = 27/158 (17%), Positives = 65/158 (41%), Gaps = 19/158 (12%) Query: 51 VHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQK----------AFPQGRTLDKDP 98 V K+ L+ ++ + A +++ + + +++ + Sbjct: 1199 VDSSKLARLDTLLRELKAGGHRVLIYFQMTRMIDLMEEYLIHRQYKYLRLDGASKISDRR 1258 Query: 99 CTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 + +W ++ + + G G+NL + ++F+ W+ Q ++R Sbjct: 1259 DMVTDWQTRPELFVFLLSTRAGGLGINLT-AADTVIFYDHDWNPSNDSQAMDR-----AH 1312 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 + G + V VY LI + TIDE +++ R K +QD+++ Sbjct: 1313 RLGQTKQVTVYRLITKGTIDERIVKLARNKKEVQDIVV 1350 >gi|298387126|ref|ZP_06996680.1| Snf2 family protein [Bacteroides sp. 1_1_14] gi|298260276|gb|EFI03146.1| Snf2 family protein [Bacteroides sp. 1_1_14] Length = 1027 Score = 118 bits (295), Expect = 6e-25, Method: Composition-based stats. Identities = 32/177 (18%), Positives = 63/177 (35%), Gaps = 18/177 (10%) Query: 29 TVKCLQLANGA-VYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKA 87 ++ QLA + + + ++ I + + ++ +++ F L L + Sbjct: 840 ILRLRQLACHPQLIFPDFDGISGKTEQIIDTFDTL--RSEGHKVLIFSSFVRHLEILAEV 897 Query: 88 FPQ---------GRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLW 138 F Q G T ++ + + + G GLNL + + W Sbjct: 898 FRQRGWKYALLTGSTNNRPSEIAHFTEQKDVQAFLISLKAGGVGLNLTQADYVFI-IDPW 956 Query: 139 WDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 W+ Q I R + G + V Y I QN+I+E +LQ K + + + Sbjct: 957 WNPAAESQAIAR-----AHRIGQDKQVIAYRFITQNSIEEKILQLQEDKRRLAETFI 1008 >gi|17233188|ref|NP_490278.1| hypothetical protein all7172 [Nostoc sp. PCC 7120] gi|17135710|dbj|BAB78256.1| all7172 [Nostoc sp. PCC 7120] Length = 1055 Score = 118 bits (295), Expect = 6e-25, Method: Composition-based stats. Identities = 33/211 (15%), Positives = 73/211 (34%), Gaps = 24/211 (11%) Query: 3 QYHKFQRELYCDLQGENIEAFNSASKT--VKCLQLANGA-VYYDEEKHWKEVHDEKIKAL 59 Y R++ LQ + +K Q+ N + + + K+ L Sbjct: 823 LYEVVVRDVEEKLQEAEGIQRKGLILSTLMKLKQICNHPRQFLQDNSEFLPERSHKLSRL 882 Query: 60 EVIIEKA--NAAPIIVAYHFNSDLARLQKAFP-----------QGRTLDKDPCTIQEWNE 106 ++++A +++ F +++K G + + I ++ Sbjct: 883 VEMVDEAISEGESLLIFSQFTEVCEQIEKYLKHNLHCNTYYLHGGTSRQRREQMISDFQN 942 Query: 107 GKI--PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA 164 + + G G+ L N + F WW+ Q +R + G K+ Sbjct: 943 PDTEASVFVLSLKAGGVGITLTK-ANHVFHFDRWWNPAVEDQATDR-----AFRIGQKKN 996 Query: 165 VFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 VFV+ +A T++E + Q + K + ++ Sbjct: 997 VFVHKFVALGTLEERIDQMIEDKKKLSSAVV 1027 >gi|265764898|ref|ZP_06093173.1| SNF family helicase [Bacteroides sp. 2_1_16] gi|263254282|gb|EEZ25716.1| SNF family helicase [Bacteroides sp. 2_1_16] Length = 1016 Score = 118 bits (295), Expect = 6e-25, Method: Composition-based stats. Identities = 30/178 (16%), Positives = 59/178 (33%), Gaps = 20/178 (11%) Query: 29 TVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQ- 85 ++ QL+ + K+ + E ++ +++ F L + Sbjct: 828 ILRLRQLSCHPQLVLPD---FIGDSGKLYQIIETFETLRSEGHKVLIFSSFVKHLELVAG 884 Query: 86 --------KAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSL 137 AF G + ++ + + KI + G GLNL + + Sbjct: 885 EFRKRKWDYAFLTGSSTNRPEEIARFNRDPKIQAFLISLKAGGVGLNLTQADYVFI-IDP 943 Query: 138 WWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 WW+ Q I R + G V Y I Q +I+E ++Q K + + + Sbjct: 944 WWNPAAESQAIAR-----AHRIGQNNQVIAYRFITQGSIEEKIIQLQEEKRKLAETFI 996 >gi|253568895|ref|ZP_04846305.1| Snf2 family helicase [Bacteroides sp. 1_1_6] gi|251840914|gb|EES68995.1| Snf2 family helicase [Bacteroides sp. 1_1_6] Length = 1027 Score = 118 bits (295), Expect = 6e-25, Method: Composition-based stats. Identities = 32/177 (18%), Positives = 63/177 (35%), Gaps = 18/177 (10%) Query: 29 TVKCLQLANGA-VYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKA 87 ++ QLA + + + ++ I + + ++ +++ F L L + Sbjct: 840 ILRLRQLACHPQLIFPDFDGISGKTEQIIDTFDTL--RSEGHKVLIFSSFVRHLEILAEV 897 Query: 88 FPQ---------GRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLW 138 F Q G T ++ + + + G GLNL + + W Sbjct: 898 FRQRGWKYALLTGSTNNRPSEIAHFTEQKDVQAFLISLKAGGVGLNLTQADYVFI-IDPW 956 Query: 139 WDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 W+ Q I R + G + V Y I QN+I+E +LQ K + + + Sbjct: 957 WNPAAESQAIAR-----AHRIGQDKQVIAYRFITQNSIEEKILQLQEDKRRLAETFI 1008 >gi|168701069|ref|ZP_02733346.1| Non-specific serine/threonine protein kinase [Gemmata obscuriglobus UQM 2246] Length = 894 Score = 118 bits (295), Expect = 6e-25, Method: Composition-based stats. Identities = 33/186 (17%), Positives = 66/186 (35%), Gaps = 20/186 (10%) Query: 26 ASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLAR 83 ++ ++ Q+ N + K + L I E+ + ++V F Sbjct: 685 LAQLMRLKQICNHPAQVAGTGDYAADRSGKFRRLAEIAEEIASRQEKVLVFTQFREIADP 744 Query: 84 LQKAFPQ-----------GRTLDKDPCTIQEWNEGK-IPLLFAHPASCGHGLNLQYGGNI 131 L + G ++ K + ++ P + G GLNL + Sbjct: 745 LAEFLATLFGRSGLVLHGGTSVKKRKEFVDQFQREDGPPFFVLSLKAGGTGLNLTAAAH- 803 Query: 132 LVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQ 191 +V F WW+ Q +R + G K+ V V+ I + T++E + + + KS + Sbjct: 804 VVHFDRWWNPAIENQATDR-----AFRIGQKKNVLVHKFICRGTVEERIDEMIARKSRVA 858 Query: 192 DLLLNA 197 D + Sbjct: 859 DEAIGG 864 >gi|331697415|ref|YP_004333654.1| SNF2-like protein [Pseudonocardia dioxanivorans CB1190] gi|326952104|gb|AEA25801.1| SNF2-related protein [Pseudonocardia dioxanivorans CB1190] Length = 1053 Score = 118 bits (295), Expect = 6e-25, Method: Composition-based stats. Identities = 38/209 (18%), Positives = 71/209 (33%), Gaps = 22/209 (10%) Query: 3 QYHKFQRELYCDLQGENIEA--FNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 Y ++ ++G + A N + K Q+ N + K+ LE Sbjct: 806 LYRTVVDDMLDRIEGTDGIARRGNVLAAMAKLKQVCNHPAQLLHDGSPIGRRSGKVTRLE 865 Query: 61 VIIEK--ANAAPIIVA---YHFNSDLA-RLQKAFPQ-------GRTLDKDPCTIQEWNEG 107 I+E A ++ F S L L F Q G + ++ + Sbjct: 866 EILESILAEGDKVLCFTQYAEFASMLVPHLSGRFDQEVLYLHGGTPKKRRDEMVERFQSP 925 Query: 108 KIP-LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVF 166 P + + G GL L + +V WW+ Q +R + G +R V Sbjct: 926 DGPAIFLLSLKAGGTGLTLT-AASHVVHLDRWWNPAVENQATDR-----AFRIGQRRNVQ 979 Query: 167 VYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 V L+ T++E + + +K + ++ Sbjct: 980 VRTLVCPGTVEERIDDLITSKKALSGKVI 1008 >gi|303390899|ref|XP_003073680.1| putative transcriptional activator [Encephalitozoon intestinalis ATCC 50506] gi|303302827|gb|ADM12320.1| putative transcriptional activator [Encephalitozoon intestinalis ATCC 50506] Length = 879 Score = 118 bits (295), Expect = 7e-25, Method: Composition-based stats. Identities = 30/158 (18%), Positives = 65/158 (41%), Gaps = 18/158 (11%) Query: 52 HDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQ-KAFPQGRTLDK---------DPC 99 K+ L+ ++ + A +++ + + ++ +G T + Sbjct: 720 DSGKMIILDELLPRLKAEGHRLLIYFQMTRMIDLIEDYLVKKGYTYLRLDGSLKASARAD 779 Query: 100 TIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQA 159 I++W + + G G+NL + ++F+ W+ QQ ++R + Sbjct: 780 VIRDWQTNDKFIFLLSTRAGGLGINLT-AADTVIFYDSDWNPTADQQAMDR-----AHRL 833 Query: 160 GFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 G R V VY LI + T++E VL+ K IQ ++++ Sbjct: 834 GQTRDVTVYRLITRGTVEEKVLESANRKDEIQKMVIHG 871 >gi|311070141|ref|YP_003975064.1| putative ATP-binding SNF2 helicase or protein kinase [Bacillus atrophaeus 1942] gi|310870658|gb|ADP34133.1| putative ATP-binding SNF2 helicase or protein kinase [Bacillus atrophaeus 1942] Length = 924 Score = 117 bits (294), Expect = 7e-25, Method: Composition-based stats. Identities = 38/213 (17%), Positives = 84/213 (39%), Gaps = 25/213 (11%) Query: 3 QYHKFQRELY---CDLQGENIEAFNSASKTVKCLQLANG-AVY-YDEEKHWKEVHDEKIK 57 Y + ++ + L G +A S + Q+ + A+Y +++ K++ Sbjct: 694 LYEQLVKDTFEHMSSLTGMQRKAL-ILSMLGRLKQICDHPALYLKEDQTELLAGRSVKLE 752 Query: 58 ALEVIIEKANAAPI--IVAYHFNSDLARLQKAFPQ----------GRTLDKDPCT-IQEW 104 L ++ ++ + ++K + G +D + ++++ Sbjct: 753 KLLELMTAIRDQNESCLIFTQYIQMGNMMKKLLEKTFGEPVQFLNGSLSKQDRDSLVEKF 812 Query: 105 NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA 164 + + P L + G GLNL N ++ + WW+ Q +R + G +R Sbjct: 813 QKKEYPTLILSLKAGGTGLNLT-AANHVIHYDRWWNPAVENQATDR-----AYRIGQERF 866 Query: 165 VFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 V V+ +I TI+E + L TK T+ D ++ + Sbjct: 867 VHVHKMITTGTIEEKIDMMLETKQTLNDQIIQS 899 >gi|312878818|ref|ZP_07738618.1| SNF2-related protein [Aminomonas paucivorans DSM 12260] gi|310782109|gb|EFQ22507.1| SNF2-related protein [Aminomonas paucivorans DSM 12260] Length = 1027 Score = 117 bits (294), Expect = 7e-25, Method: Composition-based stats. Identities = 34/191 (17%), Positives = 71/191 (37%), Gaps = 20/191 (10%) Query: 24 NSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSD- 80 + + Q+ N ++ + E K+ L ++ + +V F Sbjct: 820 EVLALLTRLKQVCNHPAHFLGDGSPLEGRSGKLARLVELLAQVREQGECALVFSQFAEMG 879 Query: 81 ---LARLQKAFPQ-------GRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGG 129 LQ+ + G + ++ + EG + + G GL L Sbjct: 880 GLLRDYLQRRLGEEVLFLHGGVPRVRRDEMVERFQGEGGPGVFVLSLKAGGTGLTLSR-A 938 Query: 130 NILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKST 189 N +V + WW+ Q +R + G ++ VFV+ LI T++E + L +K+ Sbjct: 939 NHVVHYDRWWNPAVEDQATDR-----AYRIGQRKNVFVHPLIVAGTLEERIDALLESKAD 993 Query: 190 IQDLLLNALKK 200 + D ++ A ++ Sbjct: 994 LADRVVGAGER 1004 >gi|311032005|ref|ZP_07710095.1| SNF2 family helicase [Bacillus sp. m3-13] Length = 937 Score = 117 bits (294), Expect = 7e-25, Method: Composition-based stats. Identities = 39/213 (18%), Positives = 83/213 (38%), Gaps = 25/213 (11%) Query: 3 QYHKFQREL---YCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEV--HDEKIK 57 Y + +E +L G + Q+ + Y +E+ + + K++ Sbjct: 713 IYEQLVKETLDKVEELGGIQRRGL-VLKMLGQLKQVCDHPALYLKEETPENLLMRSSKME 771 Query: 58 ALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFP-----QGRTLDK------DPCTIQEW 104 L ++E+ ++ + S + +A +GR L+ IQE+ Sbjct: 772 KLVELVEQIRLRGESCLIFTQYISMGNMIIEALESTLGEKGRFLNGSVVKKNRDQLIQEF 831 Query: 105 NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA 164 +G+ +L + G GLNL N ++ + WW+ Q +R + G R Sbjct: 832 QDGEFHVLVLSLKAGGTGLNLT-AANHVIHYDRWWNPAVENQATDR-----AYRIGQSRF 885 Query: 165 VFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 V V+ IA T++E + + +K + + ++ + Sbjct: 886 VHVHKFIATGTLEEKIDAMIESKQALNNQIITS 918 >gi|53711505|ref|YP_097497.1| Snf2 family helicase [Bacteroides fragilis YCH46] gi|52214370|dbj|BAD46963.1| Snf2 family helicase [Bacteroides fragilis YCH46] Length = 1016 Score = 117 bits (294), Expect = 8e-25, Method: Composition-based stats. Identities = 30/178 (16%), Positives = 59/178 (33%), Gaps = 20/178 (11%) Query: 29 TVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQ- 85 ++ QL+ + K+ + E ++ +++ F L + Sbjct: 828 ILRLRQLSCHPQLVLPD---FIGDSGKLYQIIETFETLRSEGHKVLIFSSFVKHLELVAG 884 Query: 86 --------KAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSL 137 AF G + ++ + + KI + G GLNL + + Sbjct: 885 EFRKRKWDYAFLTGSSTNRPEEIARFNRDPKIQAFLISLKAGGVGLNLTQADYVFI-IDP 943 Query: 138 WWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 WW+ Q I R + G V Y I Q +I+E ++Q K + + + Sbjct: 944 WWNPAAESQAIAR-----AHRIGQNNQVIAYRFITQGSIEEKIIQLQEEKRKLAETFI 996 >gi|307149654|ref|YP_003891024.1| SNF2-like protein [Cyanothece sp. PCC 7822] gi|306986783|gb|ADN18659.1| SNF2-related protein [Cyanothece sp. PCC 7822] Length = 1048 Score = 117 bits (294), Expect = 8e-25, Method: Composition-based stats. Identities = 31/211 (14%), Positives = 72/211 (34%), Gaps = 24/211 (11%) Query: 3 QYHKFQRELYCDLQGENIEAFNSASKT--VKCLQLANGA-VYYDEEKHWKEVHDEKIKAL 59 Y +++ ++ + +K Q+ N + + + K++ L Sbjct: 817 LYEAVVKDVMEQIEETEGIQRKGLILSTLMKLKQICNHPRQFLQDNSEFTPERSHKLERL 876 Query: 60 EVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGR-----------TLDKDPCTIQEWNE 106 ++E+ A +++ F LQ R +K I + + Sbjct: 877 GEMVEEVIAEGESLLIFSQFTEIGEALQHYIKHTRHYNTYYLHGGTPRNKREQMIASFQD 936 Query: 107 GKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA 164 + + + G G+ L N + F WW+ Q +R + G ++ Sbjct: 937 PETDPSVFILSLKAGGVGITLTK-ANHVFHFDRWWNPAVEDQATDR-----AFRIGQQKN 990 Query: 165 VFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 VFV+ + T++E + Q + K + ++ Sbjct: 991 VFVHKFVTLGTLEERIDQMIEDKKKVASSIV 1021 >gi|148266412|ref|YP_001233118.1| non-specific serine/threonine protein kinase [Geobacter uraniireducens Rf4] gi|146399912|gb|ABQ28545.1| Non-specific serine/threonine protein kinase [Geobacter uraniireducens Rf4] Length = 1164 Score = 117 bits (294), Expect = 8e-25, Method: Composition-based stats. Identities = 29/185 (15%), Positives = 66/185 (35%), Gaps = 22/185 (11%) Query: 25 SASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEV-IIE-KANAAPIIVAYHFNSDLA 82 + + ++ Q+ A + K + L ++E + +V F S L Sbjct: 968 ALTAILRLRQICLSAALVTAG---VKGESPKQECLADNLLELRDEGHSALVFSQFTSYLD 1024 Query: 83 RLQKAFPQGRT----------LDKDPCTIQEWNEGKIP-LLFAHPASCGHGLNLQYGGNI 131 +++ Q + + ++++ + + P + + G GLNL Sbjct: 1025 LVEEGLKQRGLATLRLDGSTPVPRRKELVRQFQQSEEPLVFLISLKAGGKGLNLTR-ATY 1083 Query: 132 LVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQ 191 + WW+ Q +R + G V V L+ ++T++E ++ K + Sbjct: 1084 VYHLDPWWNPAVENQASDR-----AHRIGQTAQVTVNRLLMRHTVEEKMMALKERKLKLY 1138 Query: 192 DLLLN 196 LL+ Sbjct: 1139 RALLD 1143 >gi|253564436|ref|ZP_04841893.1| Snf2 family helicase [Bacteroides sp. 3_2_5] gi|251948212|gb|EES88494.1| Snf2 family helicase [Bacteroides sp. 3_2_5] gi|301161233|emb|CBW20771.1| putative SNF family helicase [Bacteroides fragilis 638R] Length = 1016 Score = 117 bits (294), Expect = 9e-25, Method: Composition-based stats. Identities = 30/178 (16%), Positives = 59/178 (33%), Gaps = 20/178 (11%) Query: 29 TVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQ- 85 ++ QL+ + K+ + E ++ +++ F L + Sbjct: 828 ILRLRQLSCHPQLVLPD---FIGDSGKLYQIIETFETLRSEGHKVLIFSSFVKHLELVAG 884 Query: 86 --------KAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSL 137 AF G + ++ + + KI + G GLNL + + Sbjct: 885 EFRKRKWDYAFLTGSSTNRPEEIARFNRDPKIQAFLISLKAGGVGLNLTQADYVFI-IDP 943 Query: 138 WWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 WW+ Q I R + G V Y I Q +I+E ++Q K + + + Sbjct: 944 WWNPAAESQAIAR-----AHRIGQNNQVIAYRFITQGSIEEKIIQLQEEKRKLAETFI 996 >gi|160901778|ref|YP_001567359.1| non-specific serine/threonine protein kinase [Petrotoga mobilis SJ95] gi|160359422|gb|ABX31036.1| Non-specific serine/threonine protein kinase [Petrotoga mobilis SJ95] Length = 1152 Score = 117 bits (293), Expect = 9e-25, Method: Composition-based stats. Identities = 33/184 (17%), Positives = 65/184 (35%), Gaps = 20/184 (10%) Query: 26 ASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLAR 83 Q+ N V Y ++ K + L +++ N +++ + Sbjct: 952 LKMLTSLKQICNHPVNYTKKGVPLPDDSGKTEKLLDLLQNIVDNNEKVVLFTQYKEMGDI 1011 Query: 84 LQK-----------AFPQGRTLDKDPCTIQEWNEG-KIPLLFAHPASCGHGLNLQYGGNI 131 L K F G K I ++ + P++ + G GLNL N Sbjct: 1012 LTKILADNIKIEPLFFHGGLNRKKRDKMINDFQTKHRYPIMILSLKAGGTGLNLT-AANH 1070 Query: 132 LVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQ 191 ++ + LWW+ Q +R + G + V V+ I T +E + + L K + Sbjct: 1071 VIHYDLWWNPAVESQATDRTF-----RIGQTKDVIVHRFITLETFEEKINEMLEKKKELS 1125 Query: 192 DLLL 195 + ++ Sbjct: 1126 ENII 1129 >gi|228904537|ref|ZP_04068620.1| hypothetical protein bthur0014_56750 [Bacillus thuringiensis IBL 4222] gi|228855101|gb|EEM99677.1| hypothetical protein bthur0014_56750 [Bacillus thuringiensis IBL 4222] Length = 413 Score = 117 bits (293), Expect = 9e-25, Method: Composition-based stats. Identities = 44/196 (22%), Positives = 83/196 (42%), Gaps = 20/196 (10%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEV 61 K Y++F++ ++ E + A+K + QLA ++ K++ ++ Sbjct: 229 KMYNEFKKHHIIEIGEELLIGDTPAAKKLYLRQLAGS------------YNEHKLQYIKD 276 Query: 62 IIEKANAAPIIVAYHFNSDLARLQKAFPQG-RTLDKDPCTIQEWNEGKIPLLFAHPASCG 120 +IE N II+ Y+F + L + T++ D + + + + + Sbjct: 277 LIESTNDR-IIIFYNFKKEYMALVDLIERPIATINGDIKDLSAYEKHDNSVTLIQYQAGA 335 Query: 121 HGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELV 180 GLNLQ N +V+F+L E +Q +R + G KR F YYL+ +I+ + Sbjct: 336 MGLNLQK-ANKIVYFTLTDKSELFEQSKKR-----THRIGQKRPCFYYYLLTDGSIEWRM 389 Query: 181 LQRLRTKSTIQDLLLN 196 L L+ + D L Sbjct: 390 LDVLKERRDYTDALFE 405 >gi|193712533|ref|XP_001943954.1| PREDICTED: putative DNA helicase Ino80-like isoform 1 [Acyrthosiphon pisum] Length = 1335 Score = 117 bits (293), Expect = 9e-25, Method: Composition-based stats. Identities = 37/176 (21%), Positives = 75/176 (42%), Gaps = 21/176 (11%) Query: 44 EEKHWKEVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQKAF----------PQG 91 +K K+K L+ ++ K +++ + L++ Sbjct: 1004 PDKQSLVTDCGKLKILDSLLTKLKQENHRVLIYSQMTRMIDILEEYMWYKKLRYMRLDGS 1063 Query: 92 RTLDKDPCTIQEW-NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 + + + ++ N I + + G G+NL + ++F+ W+ QQ ++R Sbjct: 1064 SKISERRDMVADFQNRSDIFVFLLSTRAGGLGINLT-AADTVIFYDSDWNPTVDQQAMDR 1122 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA--LKKETIH 204 + G + V VY LI QN+I+E +LQR + KS IQ ++++ LK +T+ Sbjct: 1123 -----AHRLGQTKQVTVYRLITQNSIEERILQRAKEKSEIQRMVISGGNLKPDTLK 1173 >gi|60679768|ref|YP_209912.1| SNF family helicase [Bacteroides fragilis NCTC 9343] gi|60491202|emb|CAH05950.1| putative SNF family helicase [Bacteroides fragilis NCTC 9343] Length = 1016 Score = 117 bits (293), Expect = 9e-25, Method: Composition-based stats. Identities = 30/178 (16%), Positives = 60/178 (33%), Gaps = 20/178 (11%) Query: 29 TVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQ- 85 ++ QL+ + + K+ + E ++ +++ F L + Sbjct: 828 ILRLRQLSCHPQLFLPD---FIGDSGKLYQIIETFETLRSEGHKVLIFSSFVKHLELVAG 884 Query: 86 --------KAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSL 137 AF G + ++ + + KI + G GLNL + + Sbjct: 885 EFRKRKWDYAFLTGSSTNRPEEIARFNRDPKIQAFLISLKAGGVGLNLTQADYVFI-IDP 943 Query: 138 WWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 WW+ Q I R + G V Y I Q +I+E ++Q K + + + Sbjct: 944 WWNPAAESQAIAR-----AHRIGQNNQVIAYRFITQGSIEEKIIQLQEEKRKLAETFI 996 >gi|221106529|ref|XP_002167321.1| PREDICTED: similar to predicted protein, partial [Hydra magnipapillata] Length = 352 Score = 117 bits (293), Expect = 9e-25, Method: Composition-based stats. Identities = 27/166 (16%), Positives = 65/166 (39%), Gaps = 18/166 (10%) Query: 44 EEKHWKEVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQKAFP----------QG 91 ++ K+ L+ ++ + +++ + L++ Sbjct: 32 PDRSTLASDSGKLLVLDKLLTRLKKEDHRVLIYSQMTKMIDILEEFMKFRKHSYMRLDGS 91 Query: 92 RTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERI 151 + + ++ I + G G+NL + ++F+ W+ QQ ++R Sbjct: 92 SKISDRRDMVSDFQSRDIFAFLLSTRAGGLGINLT-AADTVIFYDSDWNPTVDQQAMDR- 149 Query: 152 GVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + G + V VY L+ + T++E +L R R KS IQ+++++ Sbjct: 150 ----AHRLGQTKQVTVYRLVTKGTVEEKILNRAREKSEIQNIVISG 191 >gi|78186764|ref|YP_374807.1| DEAD/DEAH box helicase-like [Chlorobium luteolum DSM 273] gi|78166666|gb|ABB23764.1| DEAD/DEAH box helicase-like protein [Chlorobium luteolum DSM 273] Length = 1006 Score = 117 bits (293), Expect = 1e-24, Method: Composition-based stats. Identities = 45/224 (20%), Positives = 81/224 (36%), Gaps = 36/224 (16%) Query: 1 MKQYHKFQRE------LYCDLQGENIEAFNS-------ASKTVKCLQLANGAVYYDEEKH 47 MKQY RE D E IE+ + VK Q+ N V + + Sbjct: 762 MKQYCTLTREQASLYKAVVDELQEKIESSEGIERRGMVLALLVKLKQVCNHPVQFLGDNS 821 Query: 48 WKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRT------------ 93 K++ L ++ + ++ +V F ++ L +A Q R Sbjct: 822 SVADRSGKLQRLLELLAEIRESSERTLVFTQFR-EMGSLLQAHLQERLGEEVFFLHGSLS 880 Query: 94 LDKDPCTIQEWNEGKI--PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERI 151 K I+ + G + + G GLNL + ++ + WW+ Q +R Sbjct: 881 RKKRDEMIEAFQNGDDAPRIFILSLKAGGSGLNLTKASH-VIHYDRWWNPAVENQATDR- 938 Query: 152 GVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 + G K V V+ I T++E + + + K+T+ +L Sbjct: 939 ----AFRIGQKHNVEVHKFITAGTLEERIDEMIEKKTTVSGTVL 978 >gi|311745326|ref|ZP_07719111.1| Snf2 family protein [Algoriphagus sp. PR1] gi|126577862|gb|EAZ82082.1| Snf2 family protein [Algoriphagus sp. PR1] Length = 974 Score = 117 bits (293), Expect = 1e-24, Method: Composition-based stats. Identities = 30/178 (16%), Positives = 64/178 (35%), Gaps = 20/178 (11%) Query: 29 TVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNS------- 79 + Q+AN ++ E K++ + +++ + ++V F Sbjct: 786 LTQLRQIANHPKMVRDD---YEGESGKLEDITYMLQSTISENHKVLVFSQFVRHLSIVKE 842 Query: 80 --DLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSL 137 D + ++ G T D+ I + + G GLNL + Sbjct: 843 YLDKEGIPYSYLDGSTKDRQAQVEAFQENDDIKVFLISLKAGGVGLNLTK-AEYVFLLDP 901 Query: 138 WWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 WW+ Q I+R + G + V +Y I++N+++E ++ K + L+ Sbjct: 902 WWNPAVEAQAIDR-----AHRIGQENKVIIYKFISRNSVEEKIMALQNRKLALAGELI 954 >gi|329940611|ref|ZP_08289892.1| helicase [Streptomyces griseoaurantiacus M045] gi|329300672|gb|EGG44569.1| helicase [Streptomyces griseoaurantiacus M045] Length = 940 Score = 117 bits (293), Expect = 1e-24, Method: Composition-based stats. Identities = 35/212 (16%), Positives = 72/212 (33%), Gaps = 24/212 (11%) Query: 2 KQYHKFQRELYCDLQGENIEAFNS--ASKTVKCLQLANG-AVY-YDEEKHWKEVHDE--- 54 Y RE ++ A Q+ + A+Y ++ + + + Sbjct: 709 ALYEAVVRESMLAIETAEGMARRGMVLKLLTSLKQICDHPALYLKEDPATARALGERSGK 768 Query: 55 -KIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFP----------QGRTLDKDPCTIQE 103 + + + +V + + G + + + Sbjct: 769 LALLDELLDTLLSEDGSALVFTQYVGMARLITAHLAARAVPVDLLHGGTPVPERERMVDR 828 Query: 104 WNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKR 163 + EG P+L + G GLNL G+ +V WW+ +Q +R + G + Sbjct: 829 FQEGATPVLVLSLKAAGTGLNLTRAGH-VVHVDRWWNPAVEEQATDR-----AYRIGQTQ 882 Query: 164 AVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 V V+ LI + T+++ + LR K + D +L Sbjct: 883 PVQVHRLITEGTVEDRIDDMLRAKRALADAIL 914 >gi|118581141|ref|YP_902391.1| SNF2-related protein [Pelobacter propionicus DSM 2379] gi|118503851|gb|ABL00334.1| SNF2-related protein [Pelobacter propionicus DSM 2379] Length = 1164 Score = 117 bits (293), Expect = 1e-24, Method: Composition-based stats. Identities = 34/185 (18%), Positives = 63/185 (34%), Gaps = 22/185 (11%) Query: 25 SASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKAL-EVIIE-KANAAPIIVAYHFNSDLA 82 + + ++ Q+ K+ L E + E + ++V F S L Sbjct: 969 ALTALLRLRQICLAPSLALPG---SSDSSPKLDFLVEQLAELRDEGHSVLVFSQFTSYLD 1025 Query: 83 RLQKAF-----PQGRTLDKDPCT-----IQEWNEGKIP-LLFAHPASCGHGLNLQYGGNI 131 +++A P R P +Q + P + + G GLNL Sbjct: 1026 MVEEALKRHHLPNLRLDGSTPTPQRKRLVQGFQHSDSPLVFLISLKAGGKGLNLTR-ATY 1084 Query: 132 LVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQ 191 + WW+ Q +R + G R V + LI ++TI+E ++ K + Sbjct: 1085 VYHLDPWWNPAVENQASDR-----AHRLGQTRQVTITRLIMRHTIEEKMMALKEQKQKLY 1139 Query: 192 DLLLN 196 +L Sbjct: 1140 RAILE 1144 >gi|326772974|ref|ZP_08232258.1| SNF2/helicase domain protein [Actinomyces viscosus C505] gi|326637606|gb|EGE38508.1| SNF2/helicase domain protein [Actinomyces viscosus C505] Length = 1244 Score = 117 bits (293), Expect = 1e-24, Method: Composition-based stats. Identities = 28/155 (18%), Positives = 60/155 (38%), Gaps = 18/155 (11%) Query: 52 HDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFP---------QGRTLDKDPCT 100 K++ L + + +V F L+ +++ G T D+ Sbjct: 1053 PSAKVEVLVEHLGPILSEGHRALVFSQFTRYLSGVREHLEATGVRTAYMDGSTPDRQ-KV 1111 Query: 101 IQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 I + G+ + + G GL L + + WW+ + +Q ++R + G Sbjct: 1112 IDAFRAGEADVFLISLKAGGFGLTLTE-ADYVFLLDPWWNPQAEEQAVDR-----THRIG 1165 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 + V VY L++ +TI+E V+ K+ + ++ Sbjct: 1166 QDKPVMVYRLVSADTIEEKVMALKEKKAELFARVV 1200 >gi|328718561|ref|XP_003246514.1| PREDICTED: putative DNA helicase Ino80-like isoform 2 [Acyrthosiphon pisum] Length = 1314 Score = 117 bits (293), Expect = 1e-24, Method: Composition-based stats. Identities = 37/176 (21%), Positives = 75/176 (42%), Gaps = 21/176 (11%) Query: 44 EEKHWKEVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQKAF----------PQG 91 +K K+K L+ ++ K +++ + L++ Sbjct: 1004 PDKQSLVTDCGKLKILDSLLTKLKQENHRVLIYSQMTRMIDILEEYMWYKKLRYMRLDGS 1063 Query: 92 RTLDKDPCTIQEW-NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 + + + ++ N I + + G G+NL + ++F+ W+ QQ ++R Sbjct: 1064 SKISERRDMVADFQNRSDIFVFLLSTRAGGLGINLT-AADTVIFYDSDWNPTVDQQAMDR 1122 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA--LKKETIH 204 + G + V VY LI QN+I+E +LQR + KS IQ ++++ LK +T+ Sbjct: 1123 -----AHRLGQTKQVTVYRLITQNSIEERILQRAKEKSEIQRMVISGGNLKPDTLK 1173 >gi|298242061|ref|ZP_06965868.1| SNF2-related protein [Ktedonobacter racemifer DSM 44963] gi|297555115|gb|EFH88979.1| SNF2-related protein [Ktedonobacter racemifer DSM 44963] Length = 1068 Score = 117 bits (293), Expect = 1e-24, Method: Composition-based stats. Identities = 33/210 (15%), Positives = 71/210 (33%), Gaps = 23/210 (10%) Query: 3 QYHKFQRELYCDLQGEN--IEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 Y +E+ + S ++ Q+ N ++ ++ K+ LE Sbjct: 837 LYDAVVKEMLEKIDDAKGIERKGMILSALLRLKQVCNHPAHFMGDESALGKRSGKVLRLE 896 Query: 61 VIIEK--ANAAPIIVAYHFNSDLARLQKAFPQ-----------GRTLDKDPCTIQEWNE- 106 ++E+ A ++ F L++ + G + + + Sbjct: 897 EMLEEVLAEGDKALIFTQFAEMGQLLRRHLQEQLGREVLFLHGGTPKKVRDQLVTRFQDE 956 Query: 107 -GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 PL + G GLNL N + F WW+ Q +R + G R V Sbjct: 957 RDDAPLFLLSLKAGGVGLNLT-AANHVFHFDRWWNPAVENQATDR-----AFRIGQHRNV 1010 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 V+ + T++E + + +K + + ++ Sbjct: 1011 QVHKFVCVGTLEERIDAMIESKKALAENII 1040 >gi|329927070|ref|ZP_08281440.1| SNF2 family N-terminal domain protein [Paenibacillus sp. HGF5] gi|328938698|gb|EGG35076.1| SNF2 family N-terminal domain protein [Paenibacillus sp. HGF5] Length = 1030 Score = 117 bits (293), Expect = 1e-24, Method: Composition-based stats. Identities = 33/212 (15%), Positives = 76/212 (35%), Gaps = 24/212 (11%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKT--VKCLQLANGA--VYYDEEKHWKEVHDEKIK 57 Y E+ ++ A + K Q+ + + D+ + + K++ Sbjct: 801 AMYQAVVDEMMGQIESRTGMARKGLVLSSLTKLKQICDHPQLLRRDDGRAVRPESSGKME 860 Query: 58 ALEVIIEKAN--AAPIIVAYHFNSDLARL-----QKAFPQ------GRTLDKDPCTIQEW 104 + I++ ++ + L +K Q G + ++ + Sbjct: 861 RMLEILDSIADVGESALIFTQYVGMGELLVSMLGRKYGKQPYFLHGGVQKRERDEMVRAF 920 Query: 105 NEGK-IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKR 163 G+ + G GLNL N ++ + WW+ Q +R+ + G R Sbjct: 921 QAGEGTEFFVLSLKAGGVGLNLTR-ANHVLHYDRWWNPAVENQATDRVF-----RIGQNR 974 Query: 164 AVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 V V+ LI+Q T++E + + + K + + ++ Sbjct: 975 NVQVHKLISQGTLEERIDELIEQKKALSEQVV 1006 >gi|227496410|ref|ZP_03926698.1| helicase [Actinomyces urogenitalis DSM 15434] gi|226834062|gb|EEH66445.1| helicase [Actinomyces urogenitalis DSM 15434] Length = 1213 Score = 116 bits (292), Expect = 1e-24, Method: Composition-based stats. Identities = 24/156 (15%), Positives = 58/156 (37%), Gaps = 16/156 (10%) Query: 52 HDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTL--------DKDPCTI 101 K++ L + A +V F L+ +++ + Sbjct: 1020 PSAKVEMLRDTLVPIVAEGHRALVFSQFTRYLSSVREELEAAGLRTLYLDGGTSDRQRVV 1079 Query: 102 QEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGF 161 ++ +G+ + + G GL L + + WW+ + +Q ++R + G Sbjct: 1080 AQFRDGEADVFLISLKAGGFGLTLTE-ADYVFLLDPWWNPQAEEQAVDR-----AHRIGQ 1133 Query: 162 KRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + V VY ++A +TI++ V+ K+ + ++ Sbjct: 1134 DKPVMVYRMVAADTIEDKVMALKEKKAGLFAKVVEG 1169 >gi|261404584|ref|YP_003240825.1| SNF2-like protein [Paenibacillus sp. Y412MC10] gi|261281047|gb|ACX63018.1| SNF2-related protein [Paenibacillus sp. Y412MC10] Length = 1033 Score = 116 bits (292), Expect = 1e-24, Method: Composition-based stats. Identities = 33/212 (15%), Positives = 76/212 (35%), Gaps = 24/212 (11%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKT--VKCLQLANGA--VYYDEEKHWKEVHDEKIK 57 Y E+ ++ A + K Q+ + + D+ + + K++ Sbjct: 801 AMYQAVVDEMMGQIESRTGMARKGLVLSSLTKLKQICDHPQLLRRDDGRAVRPESSGKME 860 Query: 58 ALEVIIEKAN--AAPIIVAYHFNSDLARL-----QKAFPQ------GRTLDKDPCTIQEW 104 + I++ ++ + L +K Q G + ++ + Sbjct: 861 RMLEILDSIADVGESALIFTQYVGMGELLVSMLGRKYGKQPYFLHGGVQKRERDEMVRAF 920 Query: 105 NEGK-IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKR 163 G+ + G GLNL N ++ + WW+ Q +R+ + G R Sbjct: 921 QAGEGTEFFVLSLKAGGVGLNLTR-ANHVLHYDRWWNPAVENQATDRVF-----RIGQNR 974 Query: 164 AVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 V V+ LI+Q T++E + + + K + + ++ Sbjct: 975 NVQVHKLISQGTLEERIDELIEQKKALSEQVV 1006 >gi|213406579|ref|XP_002174061.1| helicase SWR1 [Schizosaccharomyces japonicus yFS275] gi|212002108|gb|EEB07768.1| helicase SWR1 [Schizosaccharomyces japonicus yFS275] Length = 1603 Score = 116 bits (292), Expect = 1e-24, Method: Composition-based stats. Identities = 27/163 (16%), Positives = 66/163 (40%), Gaps = 19/163 (11%) Query: 52 HDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQK----------AFPQGRTLDKDPC 99 K+ L+ ++ + AN ++V + + +++ + + Sbjct: 1425 DSGKLSKLDKLLAELKANDHRVLVYFQMTRMIDLMEEYLTFRQYKYLRLDGSSKISQRRD 1484 Query: 100 TIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQ 158 + EW + + + G G+NL + +VF+ W+ Q ++R + Sbjct: 1485 MVSEWQTRPDLFVFLLSTRAGGLGINLT-AADTVVFYDSDWNPSIDSQAMDR-----AHR 1538 Query: 159 AGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 G ++ V VY I + TI+E ++ R + K +Q ++++ + Sbjct: 1539 IGQQKQVTVYRFITKGTIEERIVHRAKEKEEVQKVVISGGESR 1581 >gi|162451641|ref|YP_001614008.1| SWF/SNF family helicase [Sorangium cellulosum 'So ce 56'] gi|161162223|emb|CAN93528.1| SWF/SNF family helicase [Sorangium cellulosum 'So ce 56'] Length = 1011 Score = 116 bits (292), Expect = 1e-24, Method: Composition-based stats. Identities = 39/185 (21%), Positives = 67/185 (36%), Gaps = 21/185 (11%) Query: 26 ASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLAR 83 S Q+ N E K+ L ++E+A +V F R Sbjct: 794 LSLLTVLKQICNHPAQCLGEAGPLAGRSGKLARLTEMLEEALAAGDRALVFTQFREMGDR 853 Query: 84 LQKA----------FPQGRT--LDKDPCTIQEWNEGKIP-LLFAHPASCGHGLNLQYGGN 130 L + F G T L +D + ++ + P + + G GLNL + Sbjct: 854 LVRHLAPSLDAEVLFLHGGTPRLARDEMVRRFQDDPRGPHVFVLSLKAGGAGLNLT-AAS 912 Query: 131 ILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 + F WW+ Q +R + G +RAV V+ L+ T++E V + L K + Sbjct: 913 HVFHFDRWWNPAVEDQATDR-----AHRIGQRRAVQVHKLVCAGTVEEKVDRMLEQKRDL 967 Query: 191 QDLLL 195 ++ Sbjct: 968 AAQVV 972 >gi|118722509|gb|ABL09965.1| helicase [Streptomyces echinatus] Length = 1011 Score = 116 bits (292), Expect = 1e-24, Method: Composition-based stats. Identities = 37/195 (18%), Positives = 71/195 (36%), Gaps = 28/195 (14%) Query: 24 NSASKTVKCLQLANGAVYY----DEEKHWKEVHDEKIK----ALEVIIEKANAAPIIVAY 75 N + Q+ N + D + K++ L ++ A + Y Sbjct: 798 NVLRLLTRLKQICNHPAQFLGEEDTDAGRLAGRSGKLERATEMLGEVVASGERALVFTQY 857 Query: 76 HFNSDL-----------ARLQKAFPQGRTLDKDPCTIQEWNEGKI--PLLFAHPASCGHG 122 DL AR+ T +D ++ + E PLL + G G Sbjct: 858 RVMGDLLARHLSGELGLARVPFLHGGTPTEHRDR-MVRAFQEDDDAPPLLLISLKAGGFG 916 Query: 123 LNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQ 182 LNL +++ + WW+ Q +R + G + V V+ L+ +T +E + Sbjct: 917 LNLTRASHVM-HYDRWWNPAVEDQATDR-----AHRIGQTKTVLVHKLVTADTFEERIDA 970 Query: 183 RLRTKSTIQDLLLNA 197 L++K ++ D ++ A Sbjct: 971 LLQSKRSLADAVVGA 985 >gi|171909776|ref|ZP_02925246.1| SNF2-related protein [Verrucomicrobium spinosum DSM 4136] Length = 916 Score = 116 bits (292), Expect = 1e-24, Method: Composition-based stats. Identities = 38/213 (17%), Positives = 73/213 (34%), Gaps = 23/213 (10%) Query: 2 KQYHKFQRELYCDLQGENIEAFN---SASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKA 58 + Y + L +L + + +K Q+ N + + + K + Sbjct: 681 QLYQRVVTALARELGDTEDQIQRQGVILAALMKLKQICNHPSQWSGDSRYLPADSGKFQR 740 Query: 59 LEVIIEKANAA--PIIVAYHFN-------SDLARLQKA----FPQGRTLDKDPCTIQEWN 105 LE + +IV F LA + G + K ++E+ Sbjct: 741 LEELCSGIADRQEKVIVFTQFKEMTLPVADYLATVFGRPGLVLHGGTAVGKRGQLVEEFQ 800 Query: 106 E-GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA 164 G P + G GL L + ++ F WW+ Q +R + G +A Sbjct: 801 SPGGPPFFVISVKAGGTGLTLT-AASHVIHFDRWWNPAVEDQATDR-----AYRIGQTKA 854 Query: 165 VFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 V V+ + Q T++E + +R K + + +L Sbjct: 855 VMVHKFVCQGTLEEKIDGIIREKRALANEILGG 887 >gi|92118340|ref|YP_578069.1| SNF2-related [Nitrobacter hamburgensis X14] gi|91801234|gb|ABE63609.1| SNF2-related protein [Nitrobacter hamburgensis X14] Length = 902 Score = 116 bits (292), Expect = 1e-24, Method: Composition-based stats. Identities = 35/211 (16%), Positives = 70/211 (33%), Gaps = 26/211 (12%) Query: 7 FQRELYCDLQG--ENIEAFN----SASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 ++ +L G E ++ + ++ Q+ N + + W E K+ L Sbjct: 667 LYQQAVAELAGHLEEVDGIKRRGIVLAFLMRLKQICNHPSQWLGDGAWNEEDSGKLGRLR 726 Query: 61 VIIE--KANAAPIIVAYHFNSDLARLQK------------AFPQGRTLDKDPCTIQEWNE 106 I E A +V F A L + + Q + Sbjct: 727 DIAEVVAARQEKALVFTQFKETTAPLLAFLGSVFGRPGLVLHGETEVKKRKDLVRQFQED 786 Query: 107 GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVF 166 +P + G GLNL + ++ F WW+ Q +R + G + V Sbjct: 787 EDVPFFVLSVKAGGTGLNLT-AASHVIHFDRWWNPAVENQATDR-----AFRVGQTKNVL 840 Query: 167 VYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 V+ + + T++E + + +K + L+ Sbjct: 841 VHKFLCRGTVEEKIDHMIESKKQLAGDFLSG 871 >gi|186474348|ref|YP_001863319.1| non-specific serine/threonine protein kinase [Burkholderia phymatum STM815] gi|184198307|gb|ACC76269.1| Non-specific serine/threonine protein kinase [Burkholderia phymatum STM815] Length = 892 Score = 116 bits (292), Expect = 1e-24, Method: Composition-based stats. Identities = 36/212 (16%), Positives = 77/212 (36%), Gaps = 22/212 (10%) Query: 2 KQYHKFQRELYCDLQGEN--IEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKAL 59 Y + ++L L+G + S ++ Q+ N + + W K L Sbjct: 659 ALYERAVKDLAAALEGADGIERKGIVLSYLMRFKQICNHPSQWLGDAAWSPEASGKFGRL 718 Query: 60 EVIIE--KANAAPIIVAYHFNSDLARLQKAFP-----------QGRTLDKDPCTIQEWNE 106 +++ A ++V F L G + K ++++ E Sbjct: 719 RELVDVMAAKQEKVLVFTQFRETTEPLAAFLGSLFGREGLILHGGTAVGKRRELVRQFQE 778 Query: 107 GK-IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 + P + G GLNL + ++ F WW+ Q +R + G ++ V Sbjct: 779 DESTPFFVLSLKAGGSGLNLT-AASHVIHFDRWWNPAVENQATDR-----AFRIGQRKNV 832 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 V+ + Q T+++ + Q + +K + + +L Sbjct: 833 LVHKFVCQGTVEDRIDQLIESKQQLVNDMLEG 864 >gi|326797956|ref|YP_004315775.1| SNF2-related protein [Sphingobacterium sp. 21] gi|326548720|gb|ADZ77105.1| SNF2-related protein [Sphingobacterium sp. 21] Length = 1121 Score = 116 bits (292), Expect = 2e-24, Method: Composition-based stats. Identities = 43/214 (20%), Positives = 89/214 (41%), Gaps = 24/214 (11%) Query: 2 KQYHKFQREL---YCDLQGENIEAFNSASK--TVKCLQLANGAVYYDEEKHWKEVHDEKI 56 + Y +++E E + ++ ++ Q+ N + + K+ + KI Sbjct: 897 RIYDVYEKEFRSYISAQTEEELSNKSAVVLKGLMRLRQICNSPLLLKD-KYSNVPNAAKI 955 Query: 57 KAL-EVIIEKANAAPIIVAYHFNSDLARLQ-KAFPQG----------RTLDKDPCTIQEW 104 + L E I +++ I++ + L ++ + QG + D++ Q Sbjct: 956 EWLIEEIGQRSVQHKILLFSQYVHMLDLVEDQLHKQGLQTLKMTGSTKVKDREGLIEQFK 1015 Query: 105 NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA 164 +G++ + G GLNL + + WW+ Q I+RI + G K+ Sbjct: 1016 LDGRVKVFLMSLKVGGVGLNLTE-ADYVYLIDPWWNPAVEDQAIDRI-----YRMGQKKN 1069 Query: 165 VFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNAL 198 V LI + TI+E VLQ ++KS + L++++ Sbjct: 1070 VIAVRLICKETIEEKVLQLQQSKSELFTKLIDSI 1103 >gi|254445212|ref|ZP_05058688.1| SNF2 family N-terminal domain protein [Verrucomicrobiae bacterium DG1235] gi|198259520|gb|EDY83828.1| SNF2 family N-terminal domain protein [Verrucomicrobiae bacterium DG1235] Length = 917 Score = 116 bits (292), Expect = 2e-24, Method: Composition-based stats. Identities = 38/212 (17%), Positives = 72/212 (33%), Gaps = 22/212 (10%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKT--VKCLQLANGAVYYDEEKHWKEVHDEKIKAL 59 Y + EL DL+ T ++ Q+ N + +K K L Sbjct: 687 ALYKRTVEELAKDLREVEGIQRRGLVLTYLMRFKQICNHPSQALGDNGYKPDASGKFTRL 746 Query: 60 EVIIE--KANAAPIIVAYHFNSDLARLQKAFPQ-----------GRTLDKDPCTIQEWNE 106 + + E A +++ F A + + G + + + + Sbjct: 747 QELCEDIAARQEKVLIFTQFREMTAPIAQHLATIFGREGLVLHGGTPVAQRKALVDSFQS 806 Query: 107 GK-IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 P + G GL L + ++ F WW+ Q +R + G K+ V Sbjct: 807 PDGPPFFVLSLKAGGSGLTLT-AASHVIHFDRWWNPAVENQATDR-----AYRIGQKKNV 860 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 V+ I++ TI+E V +++K + LL Sbjct: 861 LVHKFISRGTIEEKVDTLIQSKLALSTELLKG 892 >gi|253699069|ref|YP_003020258.1| SNF2-related protein [Geobacter sp. M21] gi|251773919|gb|ACT16500.1| SNF2-related protein [Geobacter sp. M21] Length = 901 Score = 116 bits (291), Expect = 2e-24, Method: Composition-based stats. Identities = 33/212 (15%), Positives = 69/212 (32%), Gaps = 22/212 (10%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASK--TVKCLQLANGAVYYDEEKHWKEVHDEKIKAL 59 Y + ++L L+ + + Q+ N + + + K L Sbjct: 669 ALYRQGVQDLARSLKEKAGMERRGLVLAALTRFKQICNHPSQALGDGEYGAGNSGKYDRL 728 Query: 60 EVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQ-----------GRTLDKDPCTIQEWNE 106 I E+ + ++V F +L G + + + + Sbjct: 729 REICEEIESRGEKVLVFSQFKEMALQLTSFLGTVFGRSGLVLHGGTPVAERQRIVDRFQH 788 Query: 107 GKIPLLFA-HPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 P + G GLNL + ++ F WW+ Q +R + G KR V Sbjct: 789 EDGPPFLVLSLKAGGTGLNLT-AASQVIHFDRWWNPAVENQATDR-----AFRIGQKRNV 842 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 V+ + + T++E + + K+ + +L Sbjct: 843 LVHKFVCRGTVEEKIDALIAEKTRLAVDILEG 874 >gi|297696366|ref|XP_002825369.1| PREDICTED: LOW QUALITY PROTEIN: putative DNA helicase INO80 complex homolog 1-like [Pongo abelii] Length = 1537 Score = 116 bits (291), Expect = 2e-24, Method: Composition-based stats. Identities = 31/129 (24%), Positives = 57/129 (44%), Gaps = 11/129 (8%) Query: 78 NSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSL 137 RL + + ++ N I + + G G+NL + ++F+ Sbjct: 1122 KHTYMRLDGS---SKISERRDMVADFQNRNDIFVFLLSTRAGGLGINLT-AADTVIFYDS 1177 Query: 138 WWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 W+ QQ ++R + G + V VY LI + TI+E +LQR + KS IQ ++++ Sbjct: 1178 DWNPTVDQQAMDR-----AHRLGQTKQVTVYRLICKGTIEERILQRAKEKSEIQRMVISG 1232 Query: 198 --LKKETIH 204 K +T+ Sbjct: 1233 GNFKPDTLK 1241 >gi|296186183|ref|ZP_06854588.1| SNF2 family [Clostridium carboxidivorans P7] gi|296049451|gb|EFG88880.1| SNF2 family [Clostridium carboxidivorans P7] Length = 1034 Score = 116 bits (291), Expect = 2e-24, Method: Composition-based stats. Identities = 38/176 (21%), Positives = 75/176 (42%), Gaps = 24/176 (13%) Query: 29 TVKCLQLA-NGAVYYDEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQ 85 K Q+ + ++ +DE K + K+K ++++ + +++ F S L ++ Sbjct: 839 LTKLRQICLDPSIIFDEYK----GGNGKLKVALSLVKEHITSDGKVLLFSQFTSVLKKIG 894 Query: 86 KAFPQ---------GRTLDKDP-CTIQEWNE-GKIPLLFAHPASCGHGLNLQYGGNILVF 134 +A + G T K+ + E+N K+ + + G GLNL N+++ Sbjct: 895 EALKEDDIEYFYLDGSTKSKERIKLVNEFNSCTKVKVFLISLKAGGTGLNLT-SANLVIH 953 Query: 135 FSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 F WW+ Q +R + G K V V L+A+ TI+E ++ K + Sbjct: 954 FDPWWNPAVEDQATDR-----AHRIGQKNVVEVIKLVARGTIEEKIILLQEHKKEL 1004 >gi|298490375|ref|YP_003720552.1| SNF2-like protein ['Nostoc azollae' 0708] gi|298232293|gb|ADI63429.1| SNF2-related protein ['Nostoc azollae' 0708] Length = 1072 Score = 116 bits (291), Expect = 2e-24, Method: Composition-based stats. Identities = 38/213 (17%), Positives = 81/213 (38%), Gaps = 23/213 (10%) Query: 2 KQYHKFQRELYCDLQGENIEAFNS--ASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKAL 59 + Y + E +++ + +K Q+ N Y +E + + K++ L Sbjct: 836 QLYQQLVDESLVEIESAEGLQRRGMILALLIKLKQICNHPAQYLKESSLAKHNSAKLQRL 895 Query: 60 EVIIEK--ANAAPIIVAYHF-------NSDLARLQKA---FPQGRT-LDKDPCTIQEW-N 105 E ++E+ A ++ F L + F G T ++ I + N Sbjct: 896 EEMLEEVLAEENRALIFTQFAEWGKLLKPYLEKQLGREILFLYGSTSKNQREEIIDRFQN 955 Query: 106 EGKIP-LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA 164 + + P ++ + G GLNL N + F WW+ Q +R+ + G + Sbjct: 956 DPQGPRIMILSLKAGGVGLNLTR-ANHVFHFDRWWNPAVENQATDRVF-----RIGQTKN 1009 Query: 165 VFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 V V+ + T++E + + +K + ++ A Sbjct: 1010 VQVHKFVCTGTVEEKINDMIESKKQLAQQVVGA 1042 >gi|255523219|ref|ZP_05390190.1| Non-specific serine/threonine protein kinase [Clostridium carboxidivorans P7] gi|255513087|gb|EET89356.1| Non-specific serine/threonine protein kinase [Clostridium carboxidivorans P7] Length = 1005 Score = 116 bits (291), Expect = 2e-24, Method: Composition-based stats. Identities = 38/176 (21%), Positives = 75/176 (42%), Gaps = 24/176 (13%) Query: 29 TVKCLQLA-NGAVYYDEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQ 85 K Q+ + ++ +DE K + K+K ++++ + +++ F S L ++ Sbjct: 810 LTKLRQICLDPSIIFDEYK----GGNGKLKVALSLVKEHITSDGKVLLFSQFTSVLKKIG 865 Query: 86 KAFPQ---------GRTLDKDP-CTIQEWNE-GKIPLLFAHPASCGHGLNLQYGGNILVF 134 +A + G T K+ + E+N K+ + + G GLNL N+++ Sbjct: 866 EALKEDDIEYFYLDGSTKSKERIKLVNEFNSCTKVKVFLISLKAGGTGLNLT-SANLVIH 924 Query: 135 FSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 F WW+ Q +R + G K V V L+A+ TI+E ++ K + Sbjct: 925 FDPWWNPAVEDQATDR-----AHRIGQKNVVEVIKLVARGTIEEKIILLQEHKKEL 975 >gi|254412572|ref|ZP_05026346.1| SNF2 family N-terminal domain protein [Microcoleus chthonoplastes PCC 7420] gi|196180882|gb|EDX75872.1| SNF2 family N-terminal domain protein [Microcoleus chthonoplastes PCC 7420] Length = 1061 Score = 116 bits (291), Expect = 2e-24, Method: Composition-based stats. Identities = 36/213 (16%), Positives = 73/213 (34%), Gaps = 24/213 (11%) Query: 3 QYHKFQRELYCDLQGENIEAFNSASKT--VKCLQLANG-AVYYDEEKHWKEVHDEKIKAL 59 Y +++ L+ + +K Q+ N A + + + K++ L Sbjct: 830 LYEAVVKDVEAKLEDAEGINRKGLILSTLLKLKQVCNHPAQFLQDNSEFSPTRSHKLERL 889 Query: 60 EVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTLD-----------KDPCTIQEWNE 106 +IE+ A +++ F + L Q + K I + + Sbjct: 890 LEMIEEVNAEGESLLIFTQFTDIGSALTNYLKQTLHYNTYYIHGGISRAKREQMITAFQD 949 Query: 107 GKI--PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA 164 + G G+ L N + F WW+ Q +R + G K+ Sbjct: 950 PDTEPSAFILSLKAGGVGITLTK-ANHVFHFDRWWNPAVEDQATDR-----AFRIGQKKN 1003 Query: 165 VFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 VFV+ +A T++E + Q + K + ++ A Sbjct: 1004 VFVHKFVALGTLEERIDQMIEEKKKLSGAIVGA 1036 >gi|281355238|ref|ZP_06241732.1| SNF2-related protein [Victivallis vadensis ATCC BAA-548] gi|281318118|gb|EFB02138.1| SNF2-related protein [Victivallis vadensis ATCC BAA-548] Length = 884 Score = 116 bits (291), Expect = 2e-24, Method: Composition-based stats. Identities = 37/207 (17%), Positives = 72/207 (34%), Gaps = 22/207 (10%) Query: 5 HKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIE 64 + +RE + E + ++ QL N Y E +K K L + E Sbjct: 659 DRMRRE--LEAADEFQKKGVVLKSLMQFKQLCNHPAQYTGEGDFKAEESGKFLELAELAE 716 Query: 65 --KANAAPIIVAYHFNSDLARLQKAFPQ-----------GRTLDKDPCTIQEWNEGK-IP 110 ++V F L + + G ++ ++ + + + P Sbjct: 717 KIAMKQEKVLVFTQFREMTDPLHELLSRVFGRPGLILHGGTSIRARARLVEAFQKEEGPP 776 Query: 111 LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYL 170 + G GLNL + ++ F WW+ Q +R + G R V V+ Sbjct: 777 FFVLSLKAAGTGLNLT-AASHVIHFDRWWNPAVENQATDR-----AYRIGQHRNVLVHKF 830 Query: 171 IAQNTIDELVLQRLRTKSTIQDLLLNA 197 I TI+E + + +K + D ++ + Sbjct: 831 ICSGTIEEKINSLIWSKRKLADSVVTS 857 >gi|321460021|gb|EFX71068.1| hypothetical protein DAPPUDRAFT_309233 [Daphnia pulex] Length = 1322 Score = 116 bits (291), Expect = 2e-24, Method: Composition-based stats. Identities = 39/208 (18%), Positives = 83/208 (39%), Gaps = 18/208 (8%) Query: 12 YCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEK--ANAA 69 +G+N+ +A K Q + + D K K++ L+ ++ + + Sbjct: 1086 CASAEGKNLILCGAAEVLAKPKQGWSNVILPD--KETLICDAGKLQVLDALLRRLKSEGH 1143 Query: 70 PIIVAYHFNSDLARLQKAF----------PQGRTLDKDPCTIQEWN-EGKIPLLFAHPAS 118 +++ + L++ + + ++ I + + Sbjct: 1144 RVLIYSQMTRIIDLLEEYMWHRKWTYMRLDGSSKISDRRDMVADFQTRSDIFVFLLSTRA 1203 Query: 119 CGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDE 178 G G+NL + ++F+ W+ QQ ++R Q + + V VY LI + TI+E Sbjct: 1204 GGLGINLT-AADTVIFYDSDWNPTVDQQAMDRAHRLGQTKQAREHIVTVYRLICKGTIEE 1262 Query: 179 LVLQRLRTKSTIQDLLLNA--LKKETIH 204 +LQR R KS IQ ++++ K +T+ Sbjct: 1263 RILQRAREKSKIQKIVISGGNFKPDTLK 1290 >gi|20089087|ref|NP_615162.1| SNF2 family helicase [Methanosarcina acetivorans C2A] gi|19913949|gb|AAM03642.1| helicase (SNF2 family) [Methanosarcina acetivorans C2A] Length = 1078 Score = 116 bits (291), Expect = 2e-24, Method: Composition-based stats. Identities = 33/185 (17%), Positives = 67/185 (36%), Gaps = 21/185 (11%) Query: 26 ASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLAR 83 S + Q+ N + ++ K+ L +++ N +V F Sbjct: 872 LSALTRLKQVCNHPAQFLKDNSAVPGRSGKLARLTEMLDVILENGEKALVFTQFAEMGKM 931 Query: 84 LQKAFP-----------QGRTLDKDPCTIQEWNEGK--IPLLFAHPASCGHGLNLQYGGN 130 L++ G + ++ + EGK +P+ + G GLNL G N Sbjct: 932 LKEHLQASFGCEVLFLHGGVPRKQRDRMLERFQEGKEYLPIFVLSLKAGGTGLNLT-GAN 990 Query: 131 ILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 + F WW+ Q +R + G + V V+ I T++E + + + K + Sbjct: 991 HVFHFDRWWNPAVENQATDR-----AFRIGQTKNVEVHKFICAGTLEEKIDEIIERKVQV 1045 Query: 191 QDLLL 195 + ++ Sbjct: 1046 AENVV 1050 >gi|302794564|ref|XP_002979046.1| hypothetical protein SELMODRAFT_444050 [Selaginella moellendorffii] gi|300153364|gb|EFJ20003.1| hypothetical protein SELMODRAFT_444050 [Selaginella moellendorffii] Length = 1426 Score = 116 bits (291), Expect = 2e-24, Method: Composition-based stats. Identities = 30/165 (18%), Positives = 68/165 (41%), Gaps = 19/165 (11%) Query: 52 HDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGR-----------TLDKDP 98 K++AL+++ + A ++V L L+ + +D+ Sbjct: 1132 DSGKLQALDILFRRLRAEEHRVLVFAQMTKMLNILEDYMKYRKYKYLRLDGSSTIMDRRD 1191 Query: 99 CTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQ 158 + I + + G G+NL + ++F+ W+ Q ++R + Sbjct: 1192 MVKDFQHRSDIFVFLLSTRAGGLGINLT-AADTVIFYESDWNPTMDLQAMDR-----AHR 1245 Query: 159 AGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETI 203 G + V VY LI + T++E +++R K+T+Q L++ + + + Sbjct: 1246 LGQTKEVTVYRLICKGTVEEKIVKRANQKNTVQQLVMTGGQSQDV 1290 >gi|291005462|ref|ZP_06563435.1| SNF2/RAD54 family helicase [Saccharopolyspora erythraea NRRL 2338] Length = 959 Score = 116 bits (291), Expect = 2e-24, Method: Composition-based stats. Identities = 33/211 (15%), Positives = 67/211 (31%), Gaps = 24/211 (11%) Query: 3 QYHKFQRELYCDLQGENIEAFNS--ASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 Y R + + A Q+ N ++ + K++ Sbjct: 729 LYRATVRGMLDEQGMGEGIARRGRILKLLTALKQICNHPAHFLRQPGPLHGRSGKLERTA 788 Query: 61 VIIEK--ANAAPIIVAYHFNSDLARLQKAFP------------QGRTLDKDPCTIQEWNE 106 ++ + A +V + L G + + ++E+ Sbjct: 789 EMLSEVVAAGDRALVFTQYRVMGELLAGHLAAELELPAVPFLHGGVSAARRSRMVEEFQH 848 Query: 107 GK--IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA 164 P+L + G GLNL + +V + WW+ Q +R + G R Sbjct: 849 SDDAAPVLVVSLKAGGTGLNLTRATH-VVHYDRWWNPAVEDQATDR-----AHRIGQTRG 902 Query: 165 VFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 V V+ L+ T++E + L K + D ++ Sbjct: 903 VHVHKLVTHGTLEERIADLLDCKRGLADAVV 933 >gi|134099632|ref|YP_001105293.1| SNF2/RAD54 family helicase [Saccharopolyspora erythraea NRRL 2338] gi|133912255|emb|CAM02368.1| SNF2/RAD54 family helicase [Saccharopolyspora erythraea NRRL 2338] Length = 956 Score = 116 bits (291), Expect = 2e-24, Method: Composition-based stats. Identities = 33/211 (15%), Positives = 67/211 (31%), Gaps = 24/211 (11%) Query: 3 QYHKFQRELYCDLQGENIEAFNS--ASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 Y R + + A Q+ N ++ + K++ Sbjct: 726 LYRATVRGMLDEQGMGEGIARRGRILKLLTALKQICNHPAHFLRQPGPLHGRSGKLERTA 785 Query: 61 VIIEK--ANAAPIIVAYHFNSDLARLQKAFP------------QGRTLDKDPCTIQEWNE 106 ++ + A +V + L G + + ++E+ Sbjct: 786 EMLSEVVAAGDRALVFTQYRVMGELLAGHLAAELELPAVPFLHGGVSAARRSRMVEEFQH 845 Query: 107 GK--IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA 164 P+L + G GLNL + +V + WW+ Q +R + G R Sbjct: 846 SDDAAPVLVVSLKAGGTGLNLTRATH-VVHYDRWWNPAVEDQATDR-----AHRIGQTRG 899 Query: 165 VFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 V V+ L+ T++E + L K + D ++ Sbjct: 900 VHVHKLVTHGTLEERIADLLDCKRGLADAVV 930 >gi|301062656|ref|ZP_07203283.1| SNF2 family N-terminal domain protein [delta proteobacterium NaphS2] gi|300443246|gb|EFK07384.1| SNF2 family N-terminal domain protein [delta proteobacterium NaphS2] Length = 895 Score = 116 bits (291), Expect = 2e-24, Method: Composition-based stats. Identities = 40/210 (19%), Positives = 74/210 (35%), Gaps = 24/210 (11%) Query: 3 QYHKFQREL---YCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKAL 59 Y K +++ + +G + S +K Q+ N Y ++E K + L Sbjct: 669 LYGKLVQDIRGSILETEGIERKGM-ILSSLMKFKQICNHPDQYLGAGGFEEKESGKFQRL 727 Query: 60 EVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQG-----------RTLDKDPCTIQEWNE 106 I ++V F L + K I+++ Sbjct: 728 RDICTTIYEKREKVLVFTQFKEMTQPLHDFLEDVFHGKGLILHGSVAVGKRKKIIEQFQS 787 Query: 107 -GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 G +P + + G GLNL N ++ F WW+ Q +R + G K+ V Sbjct: 788 PGYVPFMVLSLKAGGIGLNLTE-ANHVIHFDRWWNPAVENQATDR-----AFRIGQKKNV 841 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 V+ + Q T++E + L KS + ++ Sbjct: 842 VVHKFLTQGTVEEKIDAMLEEKSRLSREVI 871 >gi|258404421|ref|YP_003197163.1| SNF2-like protein [Desulfohalobium retbaense DSM 5692] gi|257796648|gb|ACV67585.1| SNF2-related protein [Desulfohalobium retbaense DSM 5692] Length = 1062 Score = 116 bits (291), Expect = 2e-24, Method: Composition-based stats. Identities = 36/217 (16%), Positives = 71/217 (32%), Gaps = 28/217 (12%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASK------TVKCLQLANGAVYYDEEKHWKEVHDEK 55 K Y + + + E + SK ++ Q+A ++ K Sbjct: 839 KLYSEIRDHYRAQVLSRVEEKGLAQSKMHVLEGLLRLRQVACHPKLVGGNGQYE---SGK 895 Query: 56 IKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFP---------QGRTLDKDPCT-IQE 103 ++ L I + +V F L ++ GRT K + Sbjct: 896 LQELRERITAVVGSGHKALVFSQFTRFLRLIKDMLESEGIAYCSLDGRTPAKRRQERVAR 955 Query: 104 WNEGK-IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFK 162 + + P+ + G GLNL + + WW+ Q ++R + G Sbjct: 956 FQDVDGPPVFTISLKAGGTGLNLT-AADYVFIADPWWNPAVEMQAVDR-----THRIGQD 1009 Query: 163 RAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 + VF Y + + T++E + K + +L+ K Sbjct: 1010 KTVFTYRFVTEGTVEEKIRTLQNQKQELVQSVLSGSK 1046 >gi|224543399|ref|ZP_03683938.1| hypothetical protein CATMIT_02600 [Catenibacterium mitsuokai DSM 15897] gi|224523686|gb|EEF92791.1| hypothetical protein CATMIT_02600 [Catenibacterium mitsuokai DSM 15897] Length = 856 Score = 116 bits (291), Expect = 2e-24, Method: Composition-based stats. Identities = 35/205 (17%), Positives = 73/205 (35%), Gaps = 22/205 (10%) Query: 6 KFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEK 65 + +L + +G + Q+ N + + ++ K L+ + E Sbjct: 635 EKAEDLILESEGMERRGI-VLGLLTRLKQICNHPDQFIHDTNFNPKDSGKYAMLKKLCET 693 Query: 66 --ANAAPIIVAYHFNSDLARLQKAFP-----------QGRTLDKDPCTIQEWNEGK--IP 110 ++V + L G K ++++N +P Sbjct: 694 IYEKRERVLVFTQYKEMCEPLSDYLESIFHKKGYIIHGGIPAKKRTEIVEKFNNEDEYVP 753 Query: 111 LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYL 170 + + G GLNL N ++ F WW+ Q +R + G + VFV+ L Sbjct: 754 YIVLSLKAAGTGLNLT-AANHVIHFDRWWNPAVENQASDR-----AYRIGQTKEVFVHKL 807 Query: 171 IAQNTIDELVLQRLRTKSTIQDLLL 195 ++ TI+E + Q + +K + + +L Sbjct: 808 VSNGTIEEKINQIIESKQELAESIL 832 >gi|182414357|ref|YP_001819423.1| non-specific serine/threonine protein kinase [Opitutus terrae PB90-1] gi|177841571|gb|ACB75823.1| Non-specific serine/threonine protein kinase [Opitutus terrae PB90-1] Length = 922 Score = 116 bits (291), Expect = 2e-24, Method: Composition-based stats. Identities = 33/183 (18%), Positives = 66/183 (36%), Gaps = 20/183 (10%) Query: 26 ASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLAR 83 + + Q K KI L + + ++ +++ F L R Sbjct: 709 LALLTRLRQTCCDPDMLPWLKSPLA-DSGKIALLMEKLAEVVSSGHKVVIFSQFVMFLDR 767 Query: 84 LQ----KAFPQ-------GRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNIL 132 ++ + FP+ G TLD+ Q N ++ + G G+ L + + + Sbjct: 768 VRAALNERFPELPHFELTGMTLDRLKPVQQFQNAPGAAVMLVSLKAAGTGITL-HAADYV 826 Query: 133 VFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQD 192 WW+ Q ++R+ + G VFVY ++ TI+E + K + + Sbjct: 827 FLLDPWWNPAVEAQAVDRV-----HRIGQTNTVFVYRMVTAGTIEERIQALKEEKRDLFE 881 Query: 193 LLL 195 L+ Sbjct: 882 KLV 884 >gi|70998570|ref|XP_754007.1| SNF2 family helicase/ATPase (Ino80) [Aspergillus fumigatus Af293] gi|74672951|sp|Q4WTV7|INO80_ASPFU RecName: Full=Putative DNA helicase ino80 gi|66851643|gb|EAL91969.1| SNF2 family helicase/ATPase (Ino80), putative [Aspergillus fumigatus Af293] Length = 1708 Score = 116 bits (290), Expect = 2e-24, Method: Composition-based stats. Identities = 28/161 (17%), Positives = 63/161 (39%), Gaps = 19/161 (11%) Query: 50 EVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAF---------PQGRTL--DK 96 K+ L+ ++ + A +++ + + +++ G T D+ Sbjct: 1414 VTDSGKLAKLDELLRELKAGGHRVLLYFQMTRMIDLMEEYLTYRNYKYCRLDGSTKLEDR 1473 Query: 97 DPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 +I + + G G+NL + ++F+ W+ Q ++R Sbjct: 1474 RDTVADFQQRPEIFVFLLSTRAGGLGINLT-AADTVIFYDSDWNPTIDSQAMDR-----A 1527 Query: 157 RQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + G R V VY LI + TI+E + +R K +Q ++++ Sbjct: 1528 HRLGQTRQVTVYRLITRGTIEERIRKRALQKEEVQRVVISG 1568 >gi|159126257|gb|EDP51373.1| SNF2 family helicase/ATPase (Ino80), putative [Aspergillus fumigatus A1163] Length = 1708 Score = 116 bits (290), Expect = 2e-24, Method: Composition-based stats. Identities = 28/161 (17%), Positives = 63/161 (39%), Gaps = 19/161 (11%) Query: 50 EVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAF---------PQGRTL--DK 96 K+ L+ ++ + A +++ + + +++ G T D+ Sbjct: 1414 VTDSGKLAKLDELLRELKAGGHRVLLYFQMTRMIDLMEEYLTYRNYKYCRLDGSTKLEDR 1473 Query: 97 DPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 +I + + G G+NL + ++F+ W+ Q ++R Sbjct: 1474 RDTVADFQQRPEIFVFLLSTRAGGLGINLT-AADTVIFYDSDWNPTIDSQAMDR-----A 1527 Query: 157 RQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + G R V VY LI + TI+E + +R K +Q ++++ Sbjct: 1528 HRLGQTRQVTVYRLITRGTIEERIRKRALQKEEVQRVVISG 1568 >gi|302819699|ref|XP_002991519.1| hypothetical protein SELMODRAFT_429809 [Selaginella moellendorffii] gi|300140721|gb|EFJ07441.1| hypothetical protein SELMODRAFT_429809 [Selaginella moellendorffii] Length = 1426 Score = 116 bits (290), Expect = 2e-24, Method: Composition-based stats. Identities = 30/165 (18%), Positives = 68/165 (41%), Gaps = 19/165 (11%) Query: 52 HDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGR-----------TLDKDP 98 K++AL+++ + A ++V L L+ + +D+ Sbjct: 1132 DSGKLQALDILFRRLRAEEHRVLVFAQMTKMLNILEDYMKYRKYKYLRLDGSSTIMDRRD 1191 Query: 99 CTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQ 158 + I + + G G+NL + ++F+ W+ Q ++R + Sbjct: 1192 MVKDFQHRSDIFVFLLSTRAGGLGINLT-AADTVIFYESDWNPTMDLQAMDR-----AHR 1245 Query: 159 AGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETI 203 G + V VY LI + T++E +++R K+T+Q L++ + + + Sbjct: 1246 LGQTKEVTVYRLICKGTVEEKIVKRANQKNTVQQLVMTGGQSQDV 1290 >gi|326479960|gb|EGE03970.1| SNF2 family helicase/ATPase [Trichophyton equinum CBS 127.97] Length = 1688 Score = 116 bits (290), Expect = 2e-24, Method: Composition-based stats. Identities = 27/161 (16%), Positives = 63/161 (39%), Gaps = 19/161 (11%) Query: 50 EVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQKAF---------PQGRTL--DK 96 K+ L+ ++ + +++ + + +++ G T D+ Sbjct: 1399 VTDSGKLAKLDELLRELKNGGHRVLLYFQMTRMIDLMEEYLTYRNYKYCRLDGSTKLEDR 1458 Query: 97 DPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 + +I + + G G+NL + ++F+ W+ Q ++R Sbjct: 1459 RDTVLDFQQRPEIFIFLLSTRAGGLGINLT-AADTVIFYDSDWNPTIDSQAMDR-----A 1512 Query: 157 RQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + G R V VY LI + TI+E + +R K +Q ++++ Sbjct: 1513 HRLGQTRQVTVYRLITRGTIEERIRKRALQKEEVQRVVISG 1553 >gi|326468559|gb|EGD92568.1| SNF2 family helicase/ATPase [Trichophyton tonsurans CBS 112818] Length = 1686 Score = 116 bits (290), Expect = 2e-24, Method: Composition-based stats. Identities = 27/161 (16%), Positives = 63/161 (39%), Gaps = 19/161 (11%) Query: 50 EVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQKAF---------PQGRTL--DK 96 K+ L+ ++ + +++ + + +++ G T D+ Sbjct: 1397 VTDSGKLAKLDELLRELKNGGHRVLLYFQMTRMIDLMEEYLTYRNYKYCRLDGSTKLEDR 1456 Query: 97 DPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 + +I + + G G+NL + ++F+ W+ Q ++R Sbjct: 1457 RDTVLDFQQRPEIFIFLLSTRAGGLGINLT-AADTVIFYDSDWNPTIDSQAMDR-----A 1510 Query: 157 RQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + G R V VY LI + TI+E + +R K +Q ++++ Sbjct: 1511 HRLGQTRQVTVYRLITRGTIEERIRKRALQKEEVQRVVISG 1551 >gi|315048299|ref|XP_003173524.1| SNF2 family ATP-dependent chromatin-remodeling factor snf21 [Arthroderma gypseum CBS 118893] gi|311341491|gb|EFR00694.1| SNF2 family ATP-dependent chromatin-remodeling factor snf21 [Arthroderma gypseum CBS 118893] Length = 1692 Score = 116 bits (290), Expect = 2e-24, Method: Composition-based stats. Identities = 27/161 (16%), Positives = 63/161 (39%), Gaps = 19/161 (11%) Query: 50 EVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQKAF---------PQGRTL--DK 96 K+ L+ ++ + +++ + + +++ G T D+ Sbjct: 1403 VTDSGKLAKLDELLRELKNGGHRVLLYFQMTRMIDLMEEYLTYRNYKYCRLDGSTKLEDR 1462 Query: 97 DPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 + +I + + G G+NL + ++F+ W+ Q ++R Sbjct: 1463 RDTVLDFQQRPEIFIFLLSTRAGGLGINLT-AADTVIFYDSDWNPTIDSQAMDR-----A 1516 Query: 157 RQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + G R V VY LI + TI+E + +R K +Q ++++ Sbjct: 1517 HRLGQTRQVTVYRLITRGTIEERIRKRALQKEEVQRVVISG 1557 >gi|124007753|ref|ZP_01692456.1| helicase, SNF2 family [Microscilla marina ATCC 23134] gi|123986875|gb|EAY26647.1| helicase, SNF2 family [Microscilla marina ATCC 23134] Length = 1207 Score = 116 bits (290), Expect = 2e-24, Method: Composition-based stats. Identities = 35/183 (19%), Positives = 69/183 (37%), Gaps = 20/183 (10%) Query: 28 KTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQ 85 Q+ N +Y + H K + L +++ N ++ + L Sbjct: 1008 LMNALKQICNHPSHYLKHAHLDPGQSGKTQLLLSLLDNIYENGEKTLIFTQYREMGDLLL 1067 Query: 86 KAFPQ-----------GRTLDKDPCTIQEW-NEGKIPLLFAHPASCGHGLNLQYGGNILV 133 Q G + K ++++ N+ + + + G GLNL N ++ Sbjct: 1068 PLLEQRYHNTPLWLHGGVSRKKRDQMVEDFQNKPHVKTMLLSLKAGGTGLNLTKASN-VI 1126 Query: 134 FFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDL 193 + LWW+ Q +R + G + V VY +I Q T +E + ++TK + DL Sbjct: 1127 HYDLWWNPAVENQATDR-----AYRIGQQNNVMVYRMITQGTFEEKINAMIQTKKELADL 1181 Query: 194 LLN 196 ++ Sbjct: 1182 TVS 1184 >gi|296445439|ref|ZP_06887396.1| SNF2-related protein [Methylosinus trichosporium OB3b] gi|296257005|gb|EFH04075.1| SNF2-related protein [Methylosinus trichosporium OB3b] Length = 890 Score = 116 bits (290), Expect = 2e-24, Method: Composition-based stats. Identities = 38/213 (17%), Positives = 76/213 (35%), Gaps = 23/213 (10%) Query: 2 KQYHKFQRELYCDLQGENIEAFN---SASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKA 58 Y EL L+ + + + ++ Q+ N + + ++ K Sbjct: 655 ALYEVAVDELEQRLKQADDDIARRGLVLAMLMRLKQICNHPSQWLSDGAYEPAQSGKFAR 714 Query: 59 LEVIIE--KANAAPIIVAYHFNSDLARLQKAFP-----------QGRTLDKDPCTIQEWN 105 L I E + ++V F +A L++ + K ++++ Sbjct: 715 LAEIAETVASRQEKLLVFTQFKEIIAPLERLLASVFGRSGLVLHGDTPVAKRKDLVKKFQ 774 Query: 106 EGK-IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA 164 E + IP + G GL L + + F WW+ Q +R + G KR Sbjct: 775 EDETIPFFVLSLKAGGSGLTLT-AASHVAHFDRWWNPSVENQATDR-----AFRIGQKRN 828 Query: 165 VFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 V V+ + + TI+E + Q + +K + +L Sbjct: 829 VLVHKFVCRGTIEERIDQLIESKRQLAQDVLGG 861 >gi|119498509|ref|XP_001266012.1| SNF2 family helicase/ATPase (Ino80), putative [Neosartorya fischeri NRRL 181] gi|206558086|sp|A1CZE5|INO80_NEOFI RecName: Full=Putative DNA helicase ino80 gi|119414176|gb|EAW24115.1| SNF2 family helicase/ATPase (Ino80), putative [Neosartorya fischeri NRRL 181] Length = 1708 Score = 116 bits (290), Expect = 2e-24, Method: Composition-based stats. Identities = 28/161 (17%), Positives = 63/161 (39%), Gaps = 19/161 (11%) Query: 50 EVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAF---------PQGRTL--DK 96 K+ L+ ++ + A +++ + + +++ G T D+ Sbjct: 1414 VTDSGKLAKLDELLRELKAGGHRVLLYFQMTRMIDLMEEYLTYRNYKYCRLDGSTKLEDR 1473 Query: 97 DPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 +I + + G G+NL + ++F+ W+ Q ++R Sbjct: 1474 RDTVADFQQRPEIFVFLLSTRAGGLGINLT-AADTVIFYDSDWNPTIDSQAMDR-----A 1527 Query: 157 RQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + G R V VY LI + TI+E + +R K +Q ++++ Sbjct: 1528 HRLGQTRQVTVYRLITRGTIEERIRKRALQKEEVQRVVISG 1568 >gi|38637840|ref|NP_942814.1| helicase superfamily protein II [Ralstonia eutropha H16] gi|32527178|gb|AAP85928.1| putative helicase, superfamily II [Ralstonia eutropha H16] Length = 892 Score = 116 bits (290), Expect = 3e-24, Method: Composition-based stats. Identities = 36/212 (16%), Positives = 74/212 (34%), Gaps = 22/212 (10%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKT--VKCLQLANGAVYYDEEKHWKEVHDEKIKAL 59 Y + ++L L+ + + ++ Q+ N + + WK K L Sbjct: 659 ALYQRAVKDLAAALEDADGIGRKGVVLSYLMRFKQICNHPSQWLGDAAWKAEDSGKFARL 718 Query: 60 EVIIE--KANAAPIIVAYHFNSDLARLQKAFP-----------QGRTLDKDPCTIQEWNE 106 + E A ++V F L G + K ++ + E Sbjct: 719 RQLAEVIAAKQEKVLVFTQFRETTEPLAAFLGSIFGREGLVLHGGTPVAKRRELVKRFQE 778 Query: 107 GKI-PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 ++ P + G GLNL + ++ + WW+ Q +R + G +R V Sbjct: 779 DELTPFFVLSLKAGGAGLNLT-AASHVIHYDRWWNPAVENQATDR-----AFRIGQRRNV 832 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 V+ I + T+++ + Q + K + +L Sbjct: 833 LVHKFICRGTVEDRIDQLIEAKQQLVKDVLEG 864 >gi|50546160|ref|XP_500607.1| YALI0B07513p [Yarrowia lipolytica] gi|49646473|emb|CAG82840.1| YALI0B07513p [Yarrowia lipolytica] Length = 807 Score = 116 bits (290), Expect = 3e-24, Method: Composition-based stats. Identities = 41/175 (23%), Positives = 75/175 (42%), Gaps = 21/175 (12%) Query: 45 EKHWKEVHDEKIKALEVIIEKANAA---PIIVAYHFNSDLARLQKAFPQGR--------- 92 ++ K LE ++ NA I++ ++ + L ++K Q R Sbjct: 556 DRDIYPHFSAKFLILERMLRSINAETNDKIVIISNYTATLDLIEKMCRQRRYGCLRLDGT 615 Query: 93 -TLDKDPCTIQEWN--EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIE 149 ++K + ++N EG+ + + G GLNL G N L+ W+ QQ + Sbjct: 616 MNINKRAKLVTQFNDPEGQEFIFLLSSKAGGCGLNL-IGANRLILMDPDWNPAADQQALA 674 Query: 150 RIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIH 204 R+ + G K+ FVY LIA TI+E + QR K ++ +++ ++ H Sbjct: 675 RVW-----RDGQKKDCFVYRLIATGTIEEKIFQRQSMKQSLSTCVVDEVQDVERH 724 >gi|303245900|ref|ZP_07332182.1| SNF2-related protein [Desulfovibrio fructosovorans JJ] gi|302492683|gb|EFL52551.1| SNF2-related protein [Desulfovibrio fructosovorans JJ] Length = 755 Score = 116 bits (290), Expect = 3e-24, Method: Composition-based stats. Identities = 31/206 (15%), Positives = 72/206 (34%), Gaps = 23/206 (11%) Query: 5 HKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIE 64 ++ L + +G + A+ + K Q+ N + + K+ L ++E Sbjct: 530 KDLEKTL-AEAEGIKRKGIILATLS-KLKQVCNHPAQFLGDNSAIADRSGKLSRLTEMLE 587 Query: 65 K--ANAAPIIVAYHFNSDLARLQKAFPQ-----------GRTLDKDPCTIQEWNE--GKI 109 + +V F L+ + G T + ++ + G Sbjct: 588 EVVEAGDRALVFTQFKEMGDLLKTHLQETFGQELLFLHGGVTKNLRDKMVERFQSSAGAP 647 Query: 110 PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYY 169 P+ + G GLNL N + + WW+ Q +R + G + V V+ Sbjct: 648 PIFILSLKAGGTGLNLTN-ANHVFHYDRWWNPAVENQATDR-----AFRIGQHKNVLVHK 701 Query: 170 LIAQNTIDELVLQRLRTKSTIQDLLL 195 + T+++ + + K ++ + ++ Sbjct: 702 FLCVGTLEDKIDAMIEQKQSLANAVV 727 >gi|119510052|ref|ZP_01629192.1| SNF2-related helicase [Nodularia spumigena CCY9414] gi|119465239|gb|EAW46136.1| SNF2-related helicase [Nodularia spumigena CCY9414] Length = 1087 Score = 116 bits (290), Expect = 3e-24, Method: Composition-based stats. Identities = 36/213 (16%), Positives = 75/213 (35%), Gaps = 23/213 (10%) Query: 2 KQYHKFQRELYCDLQGENIEAFNS--ASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKAL 59 Y + +++ + VK Q+ N Y + +E K++ L Sbjct: 851 ALYQQVVEASLVEIESAEGLQRRGMILALLVKLKQICNHPAQYLKAATLQEHSSAKLQRL 910 Query: 60 EVIIEKA--NAAPIIVAYHF----NSDLARLQKAFPQ-------GRTLDKDPCTIQEWNE 106 + ++ A ++ F A LQ+ + G + + I + Sbjct: 911 DEMLTVALEEGDRALIFTQFAEWGKLLKAHLQQTLGKEIFFLYGGSSKKQREEMIDRFQH 970 Query: 107 GKI--PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA 164 P++ + G GLNL N + F WW+ Q +R+ + G R Sbjct: 971 DPQGPPIMILSLKAGGVGLNLTR-ANHVFHFDRWWNPAVENQATDRVF-----RIGQTRN 1024 Query: 165 VFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 V V+ + T++E + + +K + + ++ A Sbjct: 1025 VQVHKFVCTGTLEEKIHDMIESKKQLAEQVVGA 1057 >gi|149919942|ref|ZP_01908417.1| SNF2/helicase domain protein [Plesiocystis pacifica SIR-1] gi|149819215|gb|EDM78649.1| SNF2/helicase domain protein [Plesiocystis pacifica SIR-1] Length = 1056 Score = 115 bits (289), Expect = 3e-24, Method: Composition-based stats. Identities = 34/212 (16%), Positives = 69/212 (32%), Gaps = 27/212 (12%) Query: 2 KQYHKFQ---RELYCDLQGENIEAFNSASKTVKCLQLANG-AVYYDEEKHWKEV------ 51 + Y + +E + ++ Q A A+ ++ Sbjct: 829 RTYDAVRAATQEQVVEQLSSGNNVLQVLEALLRLRQAACHRALLPGGSGRIEKDGGDPNA 888 Query: 52 HDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQ---------GRTLDKDPCT 100 K++ L + + +V + + L ++ A G T D+ Sbjct: 889 PSSKLQLLLDTLVQVVDTGHKALVFSQWTTLLDLVEPALKDAGLDFCRLDGSTRDRGGVV 948 Query: 101 IQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 + + P++ + G GLNL N + WW+ Q +R + G Sbjct: 949 ERFQDPAGPPVMIISLKAGGTGLNLTAADN-VFLLDPWWNPAVEDQAADR-----AHRIG 1002 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTIQD 192 + V V+ LIA T++E +L K + + Sbjct: 1003 QDKPVIVHRLIASETVEERILALQDRKRKLAE 1034 >gi|160880712|ref|YP_001559680.1| non-specific serine/threonine protein kinase [Clostridium phytofermentans ISDg] gi|160429378|gb|ABX42941.1| Non-specific serine/threonine protein kinase [Clostridium phytofermentans ISDg] Length = 1069 Score = 115 bits (289), Expect = 3e-24, Method: Composition-based stats. Identities = 35/209 (16%), Positives = 80/209 (38%), Gaps = 29/209 (13%) Query: 6 KFQRELYCDLQGENIEAFN--SASKTVKCLQLANGAV-----YYDEEKHWKEVHDEKIKA 58 + + ++Y ++ + IE + + Q+ Y + + +A Sbjct: 855 EVRNDIYSEIATKGIEKSQMKILAALTRLRQICCHPSTFLDEYDGGSGKLDLLLELIEEA 914 Query: 59 LEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRT----------LDKDPCTIQEWNEGK 108 AN I++ F S L ++ + + + ++ +N G+ Sbjct: 915 ------LANDHRILIFSQFTSMLKIMEAELKKLSVSYFYLEGSTPITERNDFVKRFNAGE 968 Query: 109 IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVY 168 + + G GLNL G + ++ + WW+ +Q +R+ + G K V V Sbjct: 969 GSIFLISLKAGGTGLNL-VGADTVIHYDPWWNPAVEEQATDRV-----YRIGQKNNVHVI 1022 Query: 169 YLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 L+ +NTI+E + + + K + D ++ + Sbjct: 1023 KLLTKNTIEEKIFKLQKKKKELSDSIIQS 1051 >gi|325299080|ref|YP_004258997.1| SNF2-like protein [Bacteroides salanitronis DSM 18170] gi|324318633|gb|ADY36524.1| SNF2-related protein [Bacteroides salanitronis DSM 18170] Length = 1168 Score = 115 bits (289), Expect = 3e-24, Method: Composition-based stats. Identities = 30/183 (16%), Positives = 65/183 (35%), Gaps = 20/183 (10%) Query: 29 TVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQK 86 + Q+ N + + + + K + L +E AN ++V F L + Sbjct: 974 ILALKQICNHPAQFLKNGNARIELFGKAEMLLDRLEGIVANGEKVLVFTQFREMGDLLVR 1033 Query: 87 AFPQGR------------TLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVF 134 + + + N + + G GLNL + ++ Sbjct: 1034 FIEERLGQHPLFYHGGCCVKQRQEMVERFQNLRSDKIFILSLKAAGTGLNLT-AASHVIH 1092 Query: 135 FSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 + LWW+ Q +R + G +R V V+ I ++T +E + ++ K + D+ Sbjct: 1093 YDLWWNPAVEAQATDR-----AYRIGQQRNVMVHRFITKDTFEERINDMIQQKKHLADMT 1147 Query: 195 LNA 197 + + Sbjct: 1148 VAS 1150 >gi|317138661|ref|XP_001817058.2| DNA helicase ino80 [Aspergillus oryzae RIB40] Length = 1690 Score = 115 bits (289), Expect = 3e-24, Method: Composition-based stats. Identities = 28/161 (17%), Positives = 63/161 (39%), Gaps = 19/161 (11%) Query: 50 EVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAF---------PQGRTL--DK 96 K+ L+ ++ + A +++ + + +++ G T D+ Sbjct: 1395 VTDSGKLAKLDELLRELKAGGHRVLLYFQMTRMIDLMEEYLTYRNYKYCRLDGSTKLEDR 1454 Query: 97 DPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 +I + + G G+NL + ++F+ W+ Q ++R Sbjct: 1455 RDTVADFQQRPEIFVFLLSTRAGGLGINLT-AADTVIFYDSDWNPTIDSQAMDR-----A 1508 Query: 157 RQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + G R V VY LI + TI+E + +R K +Q ++++ Sbjct: 1509 HRLGQTRQVTVYRLITRGTIEERIRKRALQKEEVQRVVISG 1549 >gi|150006238|ref|YP_001300982.1| helicase/SNF2 domain-containing protein [Bacteroides vulgatus ATCC 8482] gi|149934662|gb|ABR41360.1| helicase with SNF2 domain [Bacteroides vulgatus ATCC 8482] Length = 762 Score = 115 bits (289), Expect = 3e-24, Method: Composition-based stats. Identities = 35/205 (17%), Positives = 71/205 (34%), Gaps = 20/205 (9%) Query: 3 QYHKFQRELYCDLQGENIEAFNSASK--TVKCLQL-ANGAVYYDEEKHWKEVHDEKIKAL 59 Y K ++ + S + ++ Q N ++ + K Sbjct: 546 IYSKVRKTFLLAMSDGTSGRLTSIALEGLLRLRQCCVNTSLLPLSLSGKAIIDSSKFNFA 605 Query: 60 EVIIEK--ANAAPIIVAYHFNSDLARLQKA---------FPQGRTLDKDPCTIQEWNEGK 108 +I+ + +++ F S L L K G T ++ N+ Sbjct: 606 IKLIKDFVSQNHKVLLFSQFTSALELLIKHPKLKELNPLILTGETRNRQTLVNTFQNDPS 665 Query: 109 IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVY 168 ++ + G GLNL + ++ WW+ Q R + G K V VY Sbjct: 666 ATVMMVSIKAGGTGLNLT-AADRVILLDDWWNPAVESQAFAR-----THRIGQKNDVKVY 719 Query: 169 YLIAQNTIDELVLQRLRTKSTIQDL 193 L+ ++T++E +L+ + K + +L Sbjct: 720 RLVCKDTVEEKILELHKNKEEMSEL 744 >gi|121712698|ref|XP_001273960.1| SNF2 family helicase/ATPase (Ino80), putative [Aspergillus clavatus NRRL 1] gi|206558079|sp|A1C9W6|INO80_ASPCL RecName: Full=Putative DNA helicase ino80 gi|119402113|gb|EAW12534.1| SNF2 family helicase/ATPase (Ino80), putative [Aspergillus clavatus NRRL 1] Length = 1707 Score = 115 bits (289), Expect = 3e-24, Method: Composition-based stats. Identities = 28/161 (17%), Positives = 62/161 (38%), Gaps = 19/161 (11%) Query: 50 EVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAF---------PQGRTL--DK 96 K+ L+ ++ + A +++ + + +++ G T D+ Sbjct: 1415 VTDSGKLAKLDELLRELKAGGHRVLLYFQMTRMIDLMEEYLTYRNYKYCRLDGSTKLEDR 1474 Query: 97 DPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 I + + G G+NL + ++F+ W+ Q ++R Sbjct: 1475 RDTVADFQQRPDIFVFLLSTRAGGLGINLT-AADTVIFYDSDWNPTIDSQAMDR-----A 1528 Query: 157 RQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + G R V VY LI + TI+E + +R K +Q ++++ Sbjct: 1529 HRLGQTRQVTVYRLITRGTIEERIRKRALQKEEVQRVVISG 1569 >gi|240274086|gb|EER37604.1| DNA ATP-dependent helicase [Ajellomyces capsulatus H143] Length = 1764 Score = 115 bits (289), Expect = 3e-24, Method: Composition-based stats. Identities = 26/161 (16%), Positives = 63/161 (39%), Gaps = 19/161 (11%) Query: 50 EVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQKAF---------PQGRTL--DK 96 K+ L+ ++ + +++ + + +++ G T D+ Sbjct: 1465 VTDSGKLAKLDELLRELKNGGHRVLLYFQMTRMIDLMEEYLTYRNYKYCRLDGSTKLEDR 1524 Query: 97 DPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 + +I + + G G+NL + ++F+ W+ Q ++R Sbjct: 1525 RDTVLDFQQRPEIFVFLLSTRAGGLGINLT-AADTVIFYDSDWNPTIDSQAMDR-----A 1578 Query: 157 RQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + G + V VY LI + TI+E + +R K +Q ++++ Sbjct: 1579 HRLGQTKQVTVYRLITRGTIEERIRKRALQKEEVQRVVISG 1619 >gi|115438288|ref|XP_001218028.1| hypothetical protein ATEG_09406 [Aspergillus terreus NIH2624] gi|121733988|sp|Q0CA78|INO80_ASPTN RecName: Full=Putative DNA helicase ino80 gi|114188843|gb|EAU30543.1| hypothetical protein ATEG_09406 [Aspergillus terreus NIH2624] Length = 1690 Score = 115 bits (289), Expect = 3e-24, Method: Composition-based stats. Identities = 28/161 (17%), Positives = 62/161 (38%), Gaps = 19/161 (11%) Query: 50 EVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAF---------PQGRTL--DK 96 K+ L+ ++ + A +++ + + +++ G T D+ Sbjct: 1395 VTDSGKLAKLDELLRELKAGGHRVLLYFQMTRMIDLMEEYLTYRNYKYCRLDGSTKLEDR 1454 Query: 97 DPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 +I + + G G+NL + ++F+ W+ Q ++R Sbjct: 1455 RDTVADFQQRPEIFVFLLSTRAGGLGINLT-AADTVIFYDSDWNPTIDSQAMDR-----A 1508 Query: 157 RQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + G R V VY LI + TI+E + +R K +Q +++ Sbjct: 1509 HRLGQTRQVTVYRLITRGTIEERIRKRALQKEEVQRVVITG 1549 >gi|297621841|ref|YP_003709978.1| putative SNF2-family protein [Waddlia chondrophila WSU 86-1044] gi|297377142|gb|ADI38972.1| putative SNF2-family protein [Waddlia chondrophila WSU 86-1044] Length = 1204 Score = 115 bits (289), Expect = 3e-24, Method: Composition-based stats. Identities = 35/205 (17%), Positives = 81/205 (39%), Gaps = 20/205 (9%) Query: 5 HKFQRELYCDLQGEN--IEAFNSASKTVKCLQLANG-AVYYDEEKHWKEVHDEKIKALEV 61 K + L +L + I + S Q+ N A Y + + K + + Sbjct: 979 DKMRGNLIRELNDQTSPIPYLHVFSLLSSLKQICNHPAAYLKNPVDYDKYQSGKWELFKE 1038 Query: 62 IIEKA--NAAPIIVAYHFNSDLA---------RLQKAFPQGRTLDKDPCTIQEWNEGKIP 110 +I +A + ++V + + L R+ A +G TLD+ + + + Sbjct: 1039 LISEALESDQKVVVFSQYLAMLDIMQQYLDEQRIGYATIRGATLDRGEVVRRFNADSRCK 1098 Query: 111 LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYL 170 + + G G++L ++++ + WW+ Q +R+ + G +R V V+ L Sbjct: 1099 VFLGSLQAAGLGIDLT-AASVVIHYDRWWNAAREDQATDRV-----HRIGQQRGVQVFKL 1152 Query: 171 IAQNTIDELVLQRLRTKSTIQDLLL 195 + T +E + + + K + + ++ Sbjct: 1153 VTLGTFEERIDEMITRKGRLMEEVI 1177 >gi|296809211|ref|XP_002844944.1| SNF2 family ATP-dependent chromatin-remodeling factor snf21 [Arthroderma otae CBS 113480] gi|238844427|gb|EEQ34089.1| SNF2 family ATP-dependent chromatin-remodeling factor snf21 [Arthroderma otae CBS 113480] Length = 1660 Score = 115 bits (288), Expect = 3e-24, Method: Composition-based stats. Identities = 27/161 (16%), Positives = 63/161 (39%), Gaps = 19/161 (11%) Query: 50 EVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQKAF---------PQGRTL--DK 96 K+ L+ ++ + +++ + + +++ G T D+ Sbjct: 1371 VTDSGKLAKLDELLRELKNGGHRVLLYFQMTRMIDLMEEYLTYRNYKYCRLDGSTKLEDR 1430 Query: 97 DPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 + +I + + G G+NL + ++F+ W+ Q ++R Sbjct: 1431 RDTVLDFQQRPEIFIFLLSTRAGGLGINLT-AADTVIFYDSDWNPTIDSQAMDR-----A 1484 Query: 157 RQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + G R V VY LI + TI+E + +R K +Q ++++ Sbjct: 1485 HRLGQTRQVTVYRLITRGTIEERIRKRALQKEEVQRVVISG 1525 >gi|224368240|ref|YP_002602403.1| SNF2-related helicase [Desulfobacterium autotrophicum HRM2] gi|223690956|gb|ACN14239.1| SNF2-related helicase [Desulfobacterium autotrophicum HRM2] Length = 903 Score = 115 bits (288), Expect = 4e-24, Method: Composition-based stats. Identities = 45/210 (21%), Positives = 76/210 (36%), Gaps = 21/210 (10%) Query: 1 MKQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 M K +L C G + S VK Q+ N Y + K L Sbjct: 676 MDFVKKLADKLECSDPGIQRKGL-VLSALVKFKQICNHPDQYLGTGDFIPKESGKFTRLM 734 Query: 61 VIIEKANAAP--IIVAYHFNSDLARLQKAFP-----QGRTL------DKDPCTIQEWN-E 106 I +A ++V F +A L + +G + K I+E+ + Sbjct: 735 EICATIHAKRERVLVFTQFKEMVAPLAEFLETVFHQKGHIIHGSLNVKKRHQAIEEFQGK 794 Query: 107 GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVF 166 IP + + G GLNL N ++ F WW+ Q +R + G R V Sbjct: 795 AYIPFMVISLKAGGTGLNLTR-ANHVIHFDRWWNPAIENQATDR-----AFRIGQTRGVL 848 Query: 167 VYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 V+ I + TI+E + + K + + +++ Sbjct: 849 VHKFITRGTIEEKIDLMIEKKKALTNQIIS 878 >gi|166363078|ref|YP_001655351.1| putative SNF2 helicase [Microcystis aeruginosa NIES-843] gi|166085451|dbj|BAG00159.1| putative SNF2 helicase [Microcystis aeruginosa NIES-843] Length = 1040 Score = 115 bits (288), Expect = 4e-24, Method: Composition-based stats. Identities = 33/212 (15%), Positives = 76/212 (35%), Gaps = 24/212 (11%) Query: 3 QYHKFQRELYCDLQGENIEAFNSASKT--VKCLQLANGA-VYYDEEKHWKEVHDEKIKAL 59 Y +E+ L+ + ++ Q+ N + + + K++ L Sbjct: 809 LYEVVIKEVEKQLEEAEGIKRKGLILSTLMRLKQICNHPRQFLQDNSAFTPERSHKLERL 868 Query: 60 EVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQ-----------GRTLDKDPCTIQEWNE 106 ++E+ +++ F LQK Q G + K I+E+ Sbjct: 869 GEMLEEVILEGDSLLIFTQFTEIGDSLQKYLKQTFRYNTYYLHGGTSQPKREQMIEEFQH 928 Query: 107 GKI--PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA 164 + + + G G+ L N + F WW+ Q +R + G ++ Sbjct: 929 PETEPSVFILSLKAGGVGITLTK-ANHVFHFDRWWNPAVENQATDR-----AFRIGQQKN 982 Query: 165 VFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 VFV+ + T++E + + + K + + +++ Sbjct: 983 VFVHKFVTLGTLEERIDEMIEEKKKVANAIVS 1014 >gi|159028539|emb|CAO87345.1| unnamed protein product [Microcystis aeruginosa PCC 7806] Length = 1040 Score = 115 bits (288), Expect = 4e-24, Method: Composition-based stats. Identities = 33/212 (15%), Positives = 76/212 (35%), Gaps = 24/212 (11%) Query: 3 QYHKFQRELYCDLQGENIEAFNSASKT--VKCLQLANGA-VYYDEEKHWKEVHDEKIKAL 59 Y +E+ L+ + ++ Q+ N + + + K++ L Sbjct: 809 LYEVVIKEVEKQLEEAEGIKRKGLILSTLMRLKQICNHPRQFLQDNSAFTPERSHKLERL 868 Query: 60 EVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQ-----------GRTLDKDPCTIQEWNE 106 ++E+ +++ F LQK Q G + K I+E+ Sbjct: 869 GEMLEEVILEGDSLLIFTQFTEIGDSLQKYLKQTFRYNTYYLHGGTSQPKREQMIEEFQH 928 Query: 107 GKI--PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA 164 + + + G G+ L N + F WW+ Q +R + G ++ Sbjct: 929 PETEPSVFILSLKAGGVGITLTK-ANHVFHFDRWWNPAVENQATDR-----AFRIGQQKN 982 Query: 165 VFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 VFV+ + T++E + + + K + + +++ Sbjct: 983 VFVHKFVTLGTLEERIDEMIEEKKKVANAIVS 1014 >gi|239609929|gb|EEQ86916.1| SNF2 family helicase/ATPase [Ajellomyces dermatitidis ER-3] Length = 1686 Score = 115 bits (288), Expect = 4e-24, Method: Composition-based stats. Identities = 27/161 (16%), Positives = 64/161 (39%), Gaps = 19/161 (11%) Query: 50 EVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAF---------PQGRTL--DK 96 K+ L+ ++ + A +++ + + +++ G T D+ Sbjct: 1382 VTDSGKLAKLDELLHELKAGGHRVLLYFQMTRMIDLMEEYLTYRNYKYCRLDGSTKLEDR 1441 Query: 97 DPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 + +I + + G G+NL + ++F+ W+ Q ++R Sbjct: 1442 RDTVLDFQQRPEIFVFLLSTRAGGLGINLT-AADTVIFYDSDWNPTIDSQAMDR-----A 1495 Query: 157 RQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + G + V VY LI + TI+E + +R K +Q ++++ Sbjct: 1496 HRLGQTKQVTVYRLITRGTIEERIRKRALQKEEVQRVVISG 1536 >gi|256085322|ref|XP_002578871.1| helicase [Schistosoma mansoni] gi|238664258|emb|CAZ35109.1| helicase swr1, putative [Schistosoma mansoni] Length = 1272 Score = 115 bits (288), Expect = 4e-24, Method: Composition-based stats. Identities = 28/161 (17%), Positives = 66/161 (40%), Gaps = 19/161 (11%) Query: 50 EVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRT----------LDKD 97 E K+ L+ ++ + +N +++ + L++ + L Sbjct: 949 EDDSGKLTTLDYLLSELKSNGHRVLIYSQMTRMIDILEEFMLYRKHAYLRLDGSSRLSDR 1008 Query: 98 PCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 + +W + + + G G+NL + ++F+ W+ QQ ++R Sbjct: 1009 RDMVAQWQTNPRWFVFLLSTRAGGLGINLT-AADTVIFYDSDWNPTVDQQAMDR-----A 1062 Query: 157 RQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + G + V VY LI +NT++ +L+R K +Q +++ + Sbjct: 1063 HRLGQTKPVTVYRLICKNTVEGRMLRRAEEKRAMQQMVIQS 1103 >gi|327350853|gb|EGE79710.1| SNF2 family helicase/ATPase [Ajellomyces dermatitidis ATCC 18188] Length = 1686 Score = 115 bits (288), Expect = 4e-24, Method: Composition-based stats. Identities = 27/161 (16%), Positives = 64/161 (39%), Gaps = 19/161 (11%) Query: 50 EVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAF---------PQGRTL--DK 96 K+ L+ ++ + A +++ + + +++ G T D+ Sbjct: 1382 VTDSGKLAKLDELLHELKAGGHRVLLYFQMTRMIDLMEEYLTYRNYKYCRLDGSTKLEDR 1441 Query: 97 DPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 + +I + + G G+NL + ++F+ W+ Q ++R Sbjct: 1442 RDTVLDFQQRPEIFVFLLSTRAGGLGINLT-AADTVIFYDSDWNPTIDSQAMDR-----A 1495 Query: 157 RQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + G + V VY LI + TI+E + +R K +Q ++++ Sbjct: 1496 HRLGQTKQVTVYRLITRGTIEERIRKRALQKEEVQRVVISG 1536 >gi|261198791|ref|XP_002625797.1| SNF2 family helicase/ATPase [Ajellomyces dermatitidis SLH14081] gi|239594949|gb|EEQ77530.1| SNF2 family helicase/ATPase [Ajellomyces dermatitidis SLH14081] Length = 1686 Score = 115 bits (288), Expect = 4e-24, Method: Composition-based stats. Identities = 27/161 (16%), Positives = 64/161 (39%), Gaps = 19/161 (11%) Query: 50 EVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAF---------PQGRTL--DK 96 K+ L+ ++ + A +++ + + +++ G T D+ Sbjct: 1382 VTDSGKLAKLDELLHELKAGGHRVLLYFQMTRMIDLMEEYLTYRNYKYCRLDGSTKLEDR 1441 Query: 97 DPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 + +I + + G G+NL + ++F+ W+ Q ++R Sbjct: 1442 RDTVLDFQQRPEIFVFLLSTRAGGLGINLT-AADTVIFYDSDWNPTIDSQAMDR-----A 1495 Query: 157 RQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + G + V VY LI + TI+E + +R K +Q ++++ Sbjct: 1496 HRLGQTKQVTVYRLITRGTIEERIRKRALQKEEVQRVVISG 1536 >gi|225022844|ref|ZP_03712036.1| hypothetical protein CORMATOL_02890 [Corynebacterium matruchotii ATCC 33806] gi|224944368|gb|EEG25577.1| hypothetical protein CORMATOL_02890 [Corynebacterium matruchotii ATCC 33806] Length = 1054 Score = 115 bits (288), Expect = 4e-24, Method: Composition-based stats. Identities = 38/214 (17%), Positives = 72/214 (33%), Gaps = 26/214 (12%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASK--TVKCLQLANGAVYYDEEKHW----KEVHDEK 55 Y + +L L+ K Q+ N ++ + K Sbjct: 822 ALYTAYVNDLTTQLEQAEGIGRRGLVLASLTKIKQICNHPAHFLGDGSPMLRGNHHRSGK 881 Query: 56 IKALEVIIEKA--NAAPIIVAYHFNSDLARLQKAFPQ-----------GRTLDKDPCTIQ 102 ++ L I+E A + +++ + + L G + +Q Sbjct: 882 VEELMQIVENARDHGEKVLIFTQYKAFGDMLTPYLSDYYGQKIPFLHGGVSKSGRDIMVQ 941 Query: 103 EWNEGK-IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGF 161 ++ P + + G GLNL NI+V WW+ Q +R + G Sbjct: 942 QFQAPDGAPAMVLSLKAGGTGLNLT-AANIVVHMDRWWNPAVENQATDR-----AYRIGQ 995 Query: 162 KRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 + VFVY LI T++E + + KS + ++ Sbjct: 996 DKNVFVYKLITAGTVEERIHDIISGKSELAAAMI 1029 >gi|319942795|ref|ZP_08017097.1| hypothetical protein HMPREF9464_02316 [Sutterella wadsworthensis 3_1_45B] gi|319803605|gb|EFW00561.1| hypothetical protein HMPREF9464_02316 [Sutterella wadsworthensis 3_1_45B] Length = 1304 Score = 115 bits (288), Expect = 4e-24, Method: Composition-based stats. Identities = 35/176 (19%), Positives = 63/176 (35%), Gaps = 21/176 (11%) Query: 32 CLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFP 89 Q++N + +E + K +AL ++ + + +V F RL + Sbjct: 1108 LKQISNSPSQFQKE-FVDKPDSGKAEALLELLRRCRQSGRKALVFTQFREMGERLVRWIE 1166 Query: 90 QGRTLD-----------KDPCTIQEW-NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSL 137 K + + N + + G GLNL + ++ + L Sbjct: 1167 DATGRKPEFLHGGVPAAKRMEMVDAFQNNPDSEIFILSLKAGGTGLNLT-AASAVIHYDL 1225 Query: 138 WWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDL 193 WW+ Q +R + G +R V VY I T +E V + L+ K + DL Sbjct: 1226 WWNPAVEDQASDRAW-----RIGQRRDVVVYRFITAGTFEEKVNEMLKKKRELADL 1276 >gi|300709133|ref|XP_002996734.1| hypothetical protein NCER_100152 [Nosema ceranae BRL01] gi|239606056|gb|EEQ83063.1| hypothetical protein NCER_100152 [Nosema ceranae BRL01] Length = 1243 Score = 115 bits (288), Expect = 4e-24, Method: Composition-based stats. Identities = 40/186 (21%), Positives = 73/186 (39%), Gaps = 25/186 (13%) Query: 25 SASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAA----PIIVAYHFNSD 80 +T L A+ +Y+ K+K LE II I++ + + + Sbjct: 1047 GLKRTRDLLNAASHILYFKTSSEV----SCKMKGLEDIINLYGGEDIKNKILIFFQYKTT 1102 Query: 81 LARLQKAFPQ-----------GRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGG 129 + + + F + K ++N G IP+LF G GLNL G Sbjct: 1103 IDFVLQDFKKKYNLKYLRLDGSVPASKRAKIALDFNTGNIPILFLTTHIGGLGLNLT-GA 1161 Query: 130 NILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKST 189 + ++F+ W+ Q ++R + G K V V+ LI +++I+E V+ K Sbjct: 1162 DTVIFYEHDWNPFNDLQAMDR-----AHRIGQKNTVNVFRLITKDSIEEKVMDLQSFKVF 1216 Query: 190 IQDLLL 195 I ++ Sbjct: 1217 IASSVV 1222 >gi|294055867|ref|YP_003549525.1| SNF2-related protein [Coraliomargarita akajimensis DSM 45221] gi|293615200|gb|ADE55355.1| SNF2-related protein [Coraliomargarita akajimensis DSM 45221] Length = 843 Score = 115 bits (288), Expect = 4e-24, Method: Composition-based stats. Identities = 43/206 (20%), Positives = 79/206 (38%), Gaps = 25/206 (12%) Query: 5 HKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKAL----E 60 + +L +Q + A N + + Q E E KI+ L E Sbjct: 622 EELGDDLQAAMQSQ---ATNFFTLLTRLRQACCDPGLIPEVAAPLE-QSGKIQTLLIHLE 677 Query: 61 VIIEKANAAPIIVAYHFNSDLAR----LQKAFPQ-------GRTLDKDPCTIQEWNEGKI 109 +E A A +++ F L R ++ FP+ G+T D+ N+ Sbjct: 678 EALEGAGARKVVIFSQFVQLLTRLKPEIKAKFPKVALLELTGQTRDRSKPVETFQNKDGP 737 Query: 110 PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYY 169 ++ + G G+ L + + + WW+ Q ++R+ + G ++ VFVY Sbjct: 738 AVILVSLRAGGTGITL-HAADYVFLLDPWWNPAVENQAVDRV-----HRIGQQKRVFVYR 791 Query: 170 LIAQNTIDELVLQRLRTKSTIQDLLL 195 +I Q TI+E + R K + + L Sbjct: 792 MITQGTIEERIQHLKREKRELFENTL 817 >gi|254454608|ref|ZP_05068045.1| SWI/SNF family helicase [Octadecabacter antarcticus 238] gi|198269014|gb|EDY93284.1| SWI/SNF family helicase [Octadecabacter antarcticus 238] Length = 702 Score = 115 bits (288), Expect = 4e-24, Method: Composition-based stats. Identities = 45/227 (19%), Positives = 81/227 (35%), Gaps = 33/227 (14%) Query: 1 MKQYHKFQRELYC-------DLQGENIEAFN------SASKTVKCLQLANGAVYYDEEKH 47 + QY + +RE + + EA N Q+ N ++ + K Sbjct: 465 IDQYCQLEREQAALYQTTMNQIMEKIEEADNIERRGLVLKLITALKQICNHPSHFLKHKT 524 Query: 48 WKEVHDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAFPQ-----------GRTL 94 K L +I+ AN +++ + LQK + G T Sbjct: 525 LDAEKSGKTAMLMELIDNIAANEEKLLIFTQYTQMGNLLQKLITEKFGLEPLFLHGGLTR 584 Query: 95 DKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGV 153 + ++ + + L + G GLNL N +V F LWW+ Q +R Sbjct: 585 QSRDEIVDDFQTKPYVKTLILSLKAGGTGLNLTAAQN-VVHFDLWWNPAVEAQATDR--- 640 Query: 154 TRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKK 200 + G V V+ LI + T +E + L+ K + D+ ++ +K Sbjct: 641 --AYRIGQTSNVMVHRLITRGTFEEKINTMLKDKRELADMAISKGEK 685 >gi|302883714|ref|XP_003040756.1| DNA repair protein, SNF2 family [Nectria haematococca mpVI 77-13-4] gi|256721646|gb|EEU35043.1| DNA repair protein, SNF2 family [Nectria haematococca mpVI 77-13-4] Length = 805 Score = 115 bits (288), Expect = 4e-24, Method: Composition-based stats. Identities = 40/173 (23%), Positives = 69/173 (39%), Gaps = 18/173 (10%) Query: 44 EEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDL---ARLQKAFPQGRTL------ 94 E K W + + I + I++ ++ S L RL ++ G Sbjct: 555 EVKSWYSGKMAVLDRMLARIRQDTNDKIVLISNYTSTLDLFERLCRSRQYGCLRLDGTMN 614 Query: 95 -DKDPCTIQEWN--EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERI 151 +K + +N G + + G G+NL G N LV F W+ QQ + R+ Sbjct: 615 VNKRQKLVDRFNDPNGDEFVFLLSSKAGGCGINL-IGANRLVLFDPDWNPAADQQALARV 673 Query: 152 GVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIH 204 + G K+ FVY IA TI+E + QR K ++ ++++ + H Sbjct: 674 W-----RDGQKKDCFVYRFIATGTIEEKIFQRQSHKQSLSSCVVDSAEDVERH 721 >gi|22299156|ref|NP_682403.1| putative helicase [Thermosynechococcus elongatus BP-1] gi|22295338|dbj|BAC09165.1| tlr1613 [Thermosynechococcus elongatus BP-1] Length = 999 Score = 115 bits (288), Expect = 4e-24, Method: Composition-based stats. Identities = 36/212 (16%), Positives = 80/212 (37%), Gaps = 23/212 (10%) Query: 1 MKQYHKFQRELYCDLQGEN--IEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKA 58 M+ Y + ++ N + K Q+ N Y +++ + K++ Sbjct: 765 MQLYTAVVEDSLAAIENSQGIQRRGNILATLTKLKQICNHPAQYLKQEDYAPDRSGKLQR 824 Query: 59 LEVIIEKAN--AAPIIVAYHF----NSDLARLQKAFPQ------GRTLD-KDPCTIQEWN 105 L +++ +V F L+KA Q GRT + ++ + Sbjct: 825 LIEMLQALQEVGDRALVFTQFAEFGTHLKTYLEKALQQEVFFLSGRTPKAQRELMVERFQ 884 Query: 106 -EGKIP-LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKR 163 + + P + + G GLNL N + + WW+ Q +R+ + G R Sbjct: 885 HDPEAPRVFILSLKAGGVGLNLTR-ANHVFHYDRWWNPAVENQASDRVF-----RIGQAR 938 Query: 164 AVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 V ++ I T++E + +++ K + ++++ Sbjct: 939 NVQIHKFICTGTLEEKIHEQIEQKKALAEMIV 970 >gi|108756872|ref|YP_635387.1| SNF2/helicase domain-containing protein [Myxococcus xanthus DK 1622] gi|108460752|gb|ABF85937.1| SNF2/helicase domain protein [Myxococcus xanthus DK 1622] Length = 1093 Score = 115 bits (288), Expect = 4e-24, Method: Composition-based stats. Identities = 34/187 (18%), Positives = 65/187 (34%), Gaps = 21/187 (11%) Query: 26 ASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLAR 83 + + Q+AN Y E K+ + ++E+ A +V F + Sbjct: 859 LALLLYTKQIANHPAQYLGESGPLPGRSGKLARVVEMLEESLAAGDKALVFTQFREMGDK 918 Query: 84 LQKAFPQ-----------GRTLDKDPCTIQEWNEG--KIPLLFAHPASCGHGLNLQYGGN 130 L + G ++ + E + + G GLNL + Sbjct: 919 LVAHLSEYLGHEVLFLHGGTPRKARDEMVRRFQEDVHGPRVFVLSVKAGGTGLNLT-AAS 977 Query: 131 ILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 + + WW+ Q +R + G RAV V+ L+ T++E V + L K + Sbjct: 978 HVFHYDRWWNPAVEDQATDR-----AYRIGQTRAVQVHKLVCAGTVEEKVDRLLEQKRQL 1032 Query: 191 QDLLLNA 197 + ++ A Sbjct: 1033 AEKVVGA 1039 >gi|294674417|ref|YP_003575033.1| SNF2 helicase family protein [Prevotella ruminicola 23] gi|294472802|gb|ADE82191.1| SNF2 helicase family protein [Prevotella ruminicola 23] Length = 713 Score = 115 bits (288), Expect = 4e-24, Method: Composition-based stats. Identities = 36/160 (22%), Positives = 64/160 (40%), Gaps = 17/160 (10%) Query: 55 KIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAF---------PQGRTLDKDPCTIQE 103 K + + IE ++ +++ F S L L+ G T ++D Q Sbjct: 552 KYQTVIDYIETFRSEGRKVLLFSQFVSALHELEARLSSADIHFVTLYGDTRNRDIPVRQF 611 Query: 104 WNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKR 163 ++ I + + G GLNL + ++ WW+ Q + R + G K Sbjct: 612 QSDSSITVFLISLKAGGFGLNLT-SADRVILLDDWWNPAVEDQAMAR-----AHRIGQKN 665 Query: 164 AVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETI 203 V V L+ ++T++E +LQ K DL N +K T+ Sbjct: 666 NVLVLRLVCKDTVEEKILQLQAQKRQTVDLFNNTSEKLTL 705 >gi|256419642|ref|YP_003120295.1| SNF2-related protein [Chitinophaga pinensis DSM 2588] gi|256034550|gb|ACU58094.1| SNF2-related protein [Chitinophaga pinensis DSM 2588] Length = 1250 Score = 115 bits (288), Expect = 4e-24, Method: Composition-based stats. Identities = 34/196 (17%), Positives = 72/196 (36%), Gaps = 19/196 (9%) Query: 12 YCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE-VIIEKANAAP 70 + QG +K Q+ + +E + + H K+ L + E + Sbjct: 1042 VIEDQGMERSQLTILQGLMKLRQICDSPAILNEAEQY-PNHSVKLHELTREMSENISNHK 1100 Query: 71 IIVAYHFNSDLARLQK----------AFPQGRTLDKDPCTIQEWN-EGKIPLLFAHPASC 119 +++ F L +++ F + + IQ + + + Sbjct: 1101 VLIFSQFLGMLGLIREKLQHMKVPFEYFDGSTSATERERAIQNFQTNDDCRVFLISLKAG 1160 Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 G GLNL + + WW+ QQ I+R + G + +F Y +I ++T++E Sbjct: 1161 GVGLNLT-AADYVYIVDPWWNPAVEQQAIDR-----THRIGQTKNIFAYRMICKDTVEEK 1214 Query: 180 VLQRLRTKSTIQDLLL 195 +LQ K ++ ++ Sbjct: 1215 ILQLQERKKSLVKEII 1230 >gi|295674629|ref|XP_002797860.1| DNA ATP-dependent helicase [Paracoccidioides brasiliensis Pb01] gi|226280510|gb|EEH36076.1| DNA ATP-dependent helicase [Paracoccidioides brasiliensis Pb01] Length = 1614 Score = 115 bits (288), Expect = 4e-24, Method: Composition-based stats. Identities = 27/159 (16%), Positives = 62/159 (38%), Gaps = 19/159 (11%) Query: 50 EVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQKAF---------PQGRTL--DK 96 K+ L+ ++ + +++ + + +++ G T D+ Sbjct: 1310 VTDSGKLAKLDELLRELKNGGHRVLLYFQMTRMIDLMEEYLTYRNYKYCRLDGSTKLEDR 1369 Query: 97 DPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 + +I + + G G+NL + ++F+ W+ Q ++R Sbjct: 1370 RDTVLDFQQRPEIFVFLLSTRAGGLGINLT-AADTVIFYDSDWNPTIDSQAMDR-----A 1423 Query: 157 RQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 + G R V VY LI + TI+E + +R K +Q +++ Sbjct: 1424 HRLGQTRQVTVYRLITRGTIEERIRKRALQKEEVQRVVI 1462 >gi|223940436|ref|ZP_03632288.1| Non-specific serine/threonine protein kinase [bacterium Ellin514] gi|223890881|gb|EEF57390.1| Non-specific serine/threonine protein kinase [bacterium Ellin514] Length = 1099 Score = 115 bits (288), Expect = 4e-24, Method: Composition-based stats. Identities = 29/186 (15%), Positives = 64/186 (34%), Gaps = 22/186 (11%) Query: 21 EAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKA--NAAPIIVAYHFN 78 + + + Q+ + K + L +++ + ++V F Sbjct: 904 SKIHVLAALTRLRQICCHPQLVGNDAQ-----SGKTETLFELLDPLLTDGQKVLVFSQFV 958 Query: 79 SDLA---------RLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGG 129 L +++ G+T + ++ + + G GLNL Sbjct: 959 QVLKILEAECQQRQIRTHLLTGQTKQRQEVVAAFQSDPNAAVFLLSLRAAGTGLNLTN-A 1017 Query: 130 NILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKST 189 + +V + WW+ Q I+R + G V Y LIA T++E + + ++K+ Sbjct: 1018 SYVVLYDPWWNPAVEAQAIDR-----SHRIGQVNTVNAYRLIAPGTVEEKIWELQQSKAQ 1072 Query: 190 IQDLLL 195 +L Sbjct: 1073 TIADVL 1078 >gi|29840673|ref|NP_829779.1| SNF2 family helicase [Chlamydophila caviae GPIC] gi|29835023|gb|AAP05657.1| helicase, Snf2 family [Chlamydophila caviae GPIC] Length = 1166 Score = 115 bits (287), Expect = 5e-24, Method: Composition-based stats. Identities = 30/185 (16%), Positives = 70/185 (37%), Gaps = 18/185 (9%) Query: 24 NSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDL 81 + + + Q+ + + + K L ++ ++ + L Sbjct: 970 HVLATLTRLKQICCHPAIF-AKDVPEPGDSAKYDLLMDLLSSLVETGHKTVLFSQYTKML 1028 Query: 82 ARLQK---------AFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNIL 132 + ++K + G T ++ Q + + + + G GLNL G + + Sbjct: 1029 SIIKKDLEARGVRFVYLDGSTKNRLELVNQFNEDPGLLVFLISLKAGGTGLNL-VGADTV 1087 Query: 133 VFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQD 192 + + +WW+ Q +R+ + G R+V Y L+ NTI+E +L K ++ Sbjct: 1088 IHYDMWWNPAVENQATDRV-----HRIGQNRSVSSYKLVTLNTIEEKILSLQNRKKSLVK 1142 Query: 193 LLLNA 197 ++N+ Sbjct: 1143 KVINS 1147 >gi|91201478|emb|CAJ74538.1| similar to ATP-dependent RNA helicase (RNA polymerase associated protein) [Candidatus Kuenenia stuttgartiensis] Length = 886 Score = 115 bits (287), Expect = 5e-24, Method: Composition-based stats. Identities = 41/210 (19%), Positives = 72/210 (34%), Gaps = 22/210 (10%) Query: 3 QYHKFQRELYCDLQGENIEAFNSASK--TVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 Y +EL L+ +K QL N + ++E K L Sbjct: 660 LYQNTVKELSKKLEATEGVQRRGLILASLMKFKQLCNHPDQFLGTGGYEEADSGKFMRLR 719 Query: 61 VIIEK--ANAAPIIVAYHFNSDLARLQKAFPQ--GRT---------LDKDPCTIQEWNEG 107 I E +++ F L GR + ++++ Sbjct: 720 EICETIYEKREKVLIFTQFKEITGHLHAFLKTIFGREGLVMHGSVSVGMRKNIVEQFQNR 779 Query: 108 K-IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVF 166 + IP + + G GLNL N ++ F WW+ Q +R + G K+ V Sbjct: 780 EYIPYMVLSLKAGGVGLNLTE-ANHVIHFDRWWNPAVENQATDR-----AFRIGQKKNVI 833 Query: 167 VYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 V+ I + TI+E + LR K+ + ++ Sbjct: 834 VHKFITKGTIEEKINDMLREKTKLTTDVIQ 863 >gi|150391520|ref|YP_001321569.1| non-specific serine/threonine protein kinase [Alkaliphilus metalliredigens QYMF] gi|149951382|gb|ABR49910.1| Non-specific serine/threonine protein kinase [Alkaliphilus metalliredigens QYMF] Length = 883 Score = 115 bits (287), Expect = 5e-24, Method: Composition-based stats. Identities = 39/213 (18%), Positives = 77/213 (36%), Gaps = 22/213 (10%) Query: 1 MKQYHKFQRELYCDLQGENIEAFNSASKT--VKCLQLANGAVYYDEEKHWKEVHDEKIKA 58 + Y + ++ L+ + +K Q+ N Y + +K H K + Sbjct: 653 IALYKQLIEQISEKLKVAEGIERKGLVLSSIMKFKQICNHPDQYMGREDYKSEHSGKFEQ 712 Query: 59 LEVIIEKANAAP--IIVAYHFNSDLARLQKAFPQ-----------GRTLDKDPCTIQEWN 105 L I + + +++ F L G + K ++++N Sbjct: 713 LREICQIIHEKRERVLIFTQFREMTEPLSDFLSGIFSKEGFVLHGGTPVKKRNEMVEQFN 772 Query: 106 -EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA 164 E IP + + G GLNL N ++ F WW+ Q +R + G + Sbjct: 773 GEHYIPYMVLSLKAGGVGLNLT-AANHVIHFDRWWNPAVENQATDR-----AFRIGQTKN 826 Query: 165 VFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 V V+ + + TI+E + + K + +L+A Sbjct: 827 VMVHKFVTKGTIEEKIDAIIEEKQKLSGDILSA 859 >gi|325095531|gb|EGC48841.1| DNA ATP-dependent helicase [Ajellomyces capsulatus H88] Length = 1676 Score = 115 bits (287), Expect = 5e-24, Method: Composition-based stats. Identities = 26/161 (16%), Positives = 63/161 (39%), Gaps = 19/161 (11%) Query: 50 EVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQKAF---------PQGRTL--DK 96 K+ L+ ++ + +++ + + +++ G T D+ Sbjct: 1377 VTDSGKLAKLDELLRELKNGGHRVLLYFQMTRMIDLMEEYLTYRNYKYCRLDGSTKLEDR 1436 Query: 97 DPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 + +I + + G G+NL + ++F+ W+ Q ++R Sbjct: 1437 RDTVLDFQQRPEIFVFLLSTRAGGLGINLT-AADTVIFYDSDWNPTIDSQAMDR-----A 1490 Query: 157 RQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + G + V VY LI + TI+E + +R K +Q ++++ Sbjct: 1491 HRLGQTKQVTVYRLITRGTIEERIRKRALQKEEVQRVVISG 1531 >gi|305681970|ref|ZP_07404774.1| SNF2 family N-terminal domain protein [Corynebacterium matruchotii ATCC 14266] gi|305658443|gb|EFM47946.1| SNF2 family N-terminal domain protein [Corynebacterium matruchotii ATCC 14266] Length = 968 Score = 115 bits (287), Expect = 5e-24, Method: Composition-based stats. Identities = 38/214 (17%), Positives = 72/214 (33%), Gaps = 26/214 (12%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASK--TVKCLQLANGAVYYDEEKHW----KEVHDEK 55 Y + +L L+ K Q+ N ++ + K Sbjct: 736 ALYTAYVNDLTTQLEQAEGIGRRGLVLASLTKIKQICNHPAHFLGDGSPMLRGNHHRSGK 795 Query: 56 IKALEVIIEKA--NAAPIIVAYHFNSDLARLQKAFPQ-----------GRTLDKDPCTIQ 102 ++ L I+E A + +++ + + L G + +Q Sbjct: 796 VEELMQIVENARDHGEKVLIFTQYKAFGDMLTPYLSDYYGQKIPFLHGGVSKSGRDIMVQ 855 Query: 103 EWNEGK-IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGF 161 ++ P + + G GLNL NI+V WW+ Q +R + G Sbjct: 856 QFQAPDGAPAMVLSLKAGGTGLNLT-AANIVVHMDRWWNPAVENQATDR-----AYRIGQ 909 Query: 162 KRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 + VFVY LI T++E + + KS + ++ Sbjct: 910 DKNVFVYKLITAGTVEERIHDIISGKSELAAAMI 943 >gi|108758570|ref|YP_631070.1| SNF2/helicase domain-containing protein [Myxococcus xanthus DK 1622] gi|108462450|gb|ABF87635.1| SNF2/helicase domain protein [Myxococcus xanthus DK 1622] Length = 1002 Score = 115 bits (287), Expect = 5e-24, Method: Composition-based stats. Identities = 37/195 (18%), Positives = 68/195 (34%), Gaps = 20/195 (10%) Query: 9 RELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKA-- 66 R+ L E + ++ Q A ++ K++ L +E A Sbjct: 795 RKEVVALLNEGGSVLKALEALLRLRQAACHPALVPGQR---ANTSSKVETLVDALETAVS 851 Query: 67 NAAPIIVAYHFNSDLARLQKAFP---------QGRTLDKDPCTIQEWNEGKIPLLFAHPA 117 +V + S L ++ G T ++ T + ++ P+L Sbjct: 852 EGHKALVFSQWTSLLDLIEPRLKAAGIGFGRLDGTTANRGEVTERFQSQEGEPVLLMSLK 911 Query: 118 SCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 + G GLNL + + WW+ R + G +R V VY L++Q T++ Sbjct: 912 AGGTGLNLT-AADHVFLVDPWWNPAAEA-----QAADRAHRIGQERTVMVYRLVSQGTVE 965 Query: 178 ELVLQRLRTKSTIQD 192 E +L K I + Sbjct: 966 ERILGLQEKKRAIFE 980 >gi|303318869|ref|XP_003069434.1| SNF2 family N-terminal domain containing protein [Coccidioides posadasii C735 delta SOWgp] gi|240109120|gb|EER27289.1| SNF2 family N-terminal domain containing protein [Coccidioides posadasii C735 delta SOWgp] Length = 1688 Score = 115 bits (287), Expect = 5e-24, Method: Composition-based stats. Identities = 26/161 (16%), Positives = 62/161 (38%), Gaps = 19/161 (11%) Query: 50 EVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQKAF---------PQGRTL--DK 96 K+ L+ ++ + +++ + + +++ G T D+ Sbjct: 1376 VTDSGKLAKLDELLRELKNGGHRVLLYFQMTRMIDLMEEYLTYRNYKYCRLDGSTKLEDR 1435 Query: 97 DPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 +I + + G G+NL + ++F+ W+ Q ++R Sbjct: 1436 RDTVSDFQQRPEIFVFLLSTRAGGLGINLT-AADTVIFYDSDWNPTIDSQAMDR-----A 1489 Query: 157 RQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + G + V VY LI + TI+E + +R K +Q ++++ Sbjct: 1490 HRLGQTKQVTVYRLITRGTIEERIRKRALQKEEVQRVVISG 1530 >gi|251795483|ref|YP_003010214.1| SNF2-related protein [Paenibacillus sp. JDR-2] gi|247543109|gb|ACT00128.1| SNF2-related protein [Paenibacillus sp. JDR-2] Length = 965 Score = 115 bits (287), Expect = 5e-24, Method: Composition-based stats. Identities = 34/189 (17%), Positives = 68/189 (35%), Gaps = 25/189 (13%) Query: 26 ASKTVKCLQLANGAVYYDEEKH----WKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNS 79 + + QL + +EE+ W E K+ L ++E+ + ++ F Sbjct: 755 LASLTRLKQLCDHPAMLNEERELQQQWDESRSNKVARLLEMVEEIASEGERCLIFTQFVD 814 Query: 80 DLARLQKAFPQ-----------GRTLDKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQ 126 +L+K + G K I ++ + P + G GLNL Sbjct: 815 MGEQLKKLLEERLGLPVPYLHGGVPKAKRDDMIDKFQNPEEPCCAFVLSLKAGGTGLNLT 874 Query: 127 YGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRT 186 N + F WW+ Q +R + G + V V+ I T++E + + + Sbjct: 875 -AANHVFHFDRWWNPAVENQATDR-----AFRIGQTKQVQVHKFITLGTLEEKIDEMIDR 928 Query: 187 KSTIQDLLL 195 K + + ++ Sbjct: 929 KQQLNEQVV 937 >gi|145253731|ref|XP_001398378.1| DNA helicase ino80 [Aspergillus niger CBS 513.88] gi|206558118|sp|A2R9H9|INO80_ASPNC RecName: Full=Putative DNA helicase ino80 gi|134083950|emb|CAK43045.1| unnamed protein product [Aspergillus niger] Length = 1697 Score = 115 bits (287), Expect = 5e-24, Method: Composition-based stats. Identities = 28/161 (17%), Positives = 62/161 (38%), Gaps = 19/161 (11%) Query: 50 EVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAF---------PQGRTL--DK 96 K+ L+ ++ + A +++ + + +++ G T D+ Sbjct: 1402 VTDSGKLAKLDELLRELKAGGHRVLLYFQMTRMIDLMEEYLTYRNYKYCRLDGSTKLEDR 1461 Query: 97 DPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 +I + + G G+NL + ++F+ W+ Q ++R Sbjct: 1462 RDTVADFQQRPEIFVFLLSTRAGGLGINLT-AADTVIFYDSDWNPTIDSQAMDR-----A 1515 Query: 157 RQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + G R V VY LI + TI+E + +R K +Q +++ Sbjct: 1516 HRLGQTRQVTVYRLITRGTIEERIRKRALQKEEVQRVVITG 1556 >gi|328915095|gb|AEB55928.1| helicase, Snf2 family [Chlamydophila psittaci 6BC] Length = 1130 Score = 115 bits (287), Expect = 5e-24, Method: Composition-based stats. Identities = 30/185 (16%), Positives = 70/185 (37%), Gaps = 18/185 (9%) Query: 24 NSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDL 81 + + + Q+ + + + K L ++ ++ + L Sbjct: 934 HVLATLTRLKQICCHPAIF-AKDVPEPGDSAKYDLLMDLLSSLVETGHKTVLFSQYTKML 992 Query: 82 ARLQK---------AFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNIL 132 + ++K + G T ++ Q + + + + G GLNL G + + Sbjct: 993 SIIKKDLEARGVRFVYLDGSTKNRLEIVNQFNEDPGLLVFLISLKAGGTGLNL-VGADTV 1051 Query: 133 VFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQD 192 + + +WW+ Q +R+ + G R+V Y L+ NTI+E +L K ++ Sbjct: 1052 IHYDMWWNPAVENQATDRV-----HRIGQNRSVSSYKLVTLNTIEEKILTLQNRKKSLVK 1106 Query: 193 LLLNA 197 ++N+ Sbjct: 1107 KVINS 1111 >gi|71008587|ref|XP_758230.1| hypothetical protein UM02083.1 [Ustilago maydis 521] gi|46097848|gb|EAK83081.1| hypothetical protein UM02083.1 [Ustilago maydis 521] Length = 870 Score = 115 bits (287), Expect = 5e-24, Method: Composition-based stats. Identities = 41/158 (25%), Positives = 70/158 (44%), Gaps = 19/158 (12%) Query: 59 LEVIIEKANAAPIIVAYHFNSDL---ARLQKA-------FPQGRTLDKDPCTIQEWN--E 106 LE I +N +++ ++ L R+ +A T++K + +N E Sbjct: 637 LETIRATSNDKIVLI-SNYTQTLDVFERMCRANRWGMFRLDGTMTINKRQKLVDRFNDPE 695 Query: 107 GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVF 166 GK + + G GLNL G N LV F W+ QQ + R+ + G K++ F Sbjct: 696 GKEFIFLLSSKAGGCGLNL-IGANRLVLFDPDWNPASDQQALARVW-----RDGQKKSCF 749 Query: 167 VYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIH 204 VY IA +I+E +LQR K ++ +++ + H Sbjct: 750 VYRFIATGSIEEKILQRQSHKQSLSSCVVDEAQDAARH 787 >gi|89897903|ref|YP_515013.1| SWF/SNF family helicase [Chlamydophila felis Fe/C-56] gi|89331275|dbj|BAE80868.1| swi/snf family helicase 2 [Chlamydophila felis Fe/C-56] Length = 1165 Score = 115 bits (287), Expect = 6e-24, Method: Composition-based stats. Identities = 30/185 (16%), Positives = 70/185 (37%), Gaps = 18/185 (9%) Query: 24 NSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDL 81 + + + Q+ + + + K L ++ ++ + L Sbjct: 969 HVLATLTRLKQICCHPAIF-AKDVPEPGDSAKYDLLMDLLSSLVETGHKTVLFSQYTKML 1027 Query: 82 ARLQK---------AFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNIL 132 + ++K + G T ++ Q + + + + G GLNL G + + Sbjct: 1028 SIIKKDLEASGVRFVYLDGSTKNRLELVNQFNEDPGLLVFLISLKAGGTGLNL-VGADTV 1086 Query: 133 VFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQD 192 + + +WW+ Q +R+ + G R+V Y L+ NTI+E +L K ++ Sbjct: 1087 IHYDMWWNPAVENQATDRV-----HRIGQNRSVSSYKLVTLNTIEEKILTLQNRKKSLVK 1141 Query: 193 LLLNA 197 ++N+ Sbjct: 1142 KVINS 1146 >gi|291298955|ref|YP_003510233.1| SNF2-like protein [Stackebrandtia nassauensis DSM 44728] gi|290568175|gb|ADD41140.1| SNF2-related protein [Stackebrandtia nassauensis DSM 44728] Length = 621 Score = 115 bits (287), Expect = 6e-24, Method: Composition-based stats. Identities = 41/211 (19%), Positives = 75/211 (35%), Gaps = 23/211 (10%) Query: 2 KQYHK-FQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKI-KAL 59 K Y +R + L + Q+ N + ++H K+ +A Sbjct: 389 KLYSAAVERAMNDGLGSGFERHGRVLKLLTELKQICNHPAQFLRQEHPLTGRSGKLARAT 448 Query: 60 EVIIEK-ANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDP------------CTIQEWNE 106 E++ E A A +V + L L+K P + E+ Sbjct: 449 EMLAEAVAEGAQSLVFTQYRVMGELLATHLAAELGLEKVPFLHGGVSQPGRDAMVAEFQS 508 Query: 107 GKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA 164 G P +L + G GLNL ++L + WW+ Q +R + G + Sbjct: 509 GDDPPPILIVSLKAGGTGLNLTAATHVL-HYDRWWNPAVEDQATDR-----AHRIGQTKP 562 Query: 165 VFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 V VY L+ T++E + L K ++ + ++ Sbjct: 563 VTVYKLVTGGTLEERISDLLERKRSLAESIV 593 >gi|320034589|gb|EFW16533.1| SNF2 family helicase/ATPase [Coccidioides posadasii str. Silveira] Length = 1621 Score = 115 bits (287), Expect = 6e-24, Method: Composition-based stats. Identities = 26/161 (16%), Positives = 62/161 (38%), Gaps = 19/161 (11%) Query: 50 EVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQKAF---------PQGRTL--DK 96 K+ L+ ++ + +++ + + +++ G T D+ Sbjct: 1335 VTDSGKLAKLDELLRELKNGGHRVLLYFQMTRMIDLMEEYLTYRNYKYCRLDGSTKLEDR 1394 Query: 97 DPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 +I + + G G+NL + ++F+ W+ Q ++R Sbjct: 1395 RDTVSDFQQRPEIFVFLLSTRAGGLGINLT-AADTVIFYDSDWNPTIDSQAMDR-----A 1448 Query: 157 RQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + G + V VY LI + TI+E + +R K +Q ++++ Sbjct: 1449 HRLGQTKQVTVYRLITRGTIEERIRKRALQKEEVQRVVISG 1489 >gi|46127169|ref|XP_388138.1| hypothetical protein FG07962.1 [Gibberella zeae PH-1] Length = 856 Score = 115 bits (287), Expect = 6e-24, Method: Composition-based stats. Identities = 39/173 (22%), Positives = 68/173 (39%), Gaps = 18/173 (10%) Query: 44 EEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQK----------AFPQGRT 93 E K W + + I + I++ ++ S L +K Sbjct: 606 EVKSWYSGKMAVLDRMLARIRQDTNDKIVLISNYTSTLDLFEKLCRSRQYGSLRLDGTMN 665 Query: 94 LDKDPCTIQEWN--EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERI 151 ++K + +N EG + + G G+NL G N LV F W+ QQ + R+ Sbjct: 666 VNKRQKLVDRFNDPEGDEFIFLLSSKAGGCGINL-IGANRLVLFDPDWNPAADQQALARV 724 Query: 152 GVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIH 204 + G K+ FVY IA TI+E + QR K ++ ++++ + H Sbjct: 725 W-----RDGQKKDCFVYRFIATGTIEEKIFQRQSHKQSLSSCVVDSAEDVERH 772 >gi|7384851|dbj|BAA93079.1| Rad54 homolog [Neurospora crassa] Length = 834 Score = 115 bits (287), Expect = 6e-24, Method: Composition-based stats. Identities = 41/175 (23%), Positives = 73/175 (41%), Gaps = 21/175 (12%) Query: 45 EKHWKEVHDEKIKALEVI---IEKANAAPIIVAYHFNSDL---ARLQKAFPQGRTL---- 94 ++ K + K++ L+ + I I++ ++ L RL + G Sbjct: 562 DRDVKPWYSGKMQVLDRMLARIRADTNDKIVLISNYTQTLDLFERLCRNRQYGCLRLDGT 621 Query: 95 ---DKDPCTIQEWN--EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIE 149 +K + ++N EG + + G GLNL G N LV F W+ QQ + Sbjct: 622 MNVNKRQKLVDKFNDPEGDEFVFLLSSKAGGCGLNL-IGANRLVLFDPDWNPAADQQALA 680 Query: 150 RIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIH 204 R+ + G K+ FVY IA TI+E + QR K ++ ++++ + H Sbjct: 681 RVW-----RDGQKKDCFVYRFIATGTIEEKIFQRQSHKQSLSSCVVDSAEDVERH 730 >gi|85092588|ref|XP_959470.1| DNA repair and recombination protein RAD54 [Neurospora crassa OR74A] gi|28920899|gb|EAA30234.1| DNA repair and recombination protein RAD54 [Neurospora crassa OR74A] gi|40804592|emb|CAF05853.1| Rad54 homolog MUS-25 [Neurospora crassa] Length = 831 Score = 115 bits (287), Expect = 6e-24, Method: Composition-based stats. Identities = 41/175 (23%), Positives = 73/175 (41%), Gaps = 21/175 (12%) Query: 45 EKHWKEVHDEKIKALEVI---IEKANAAPIIVAYHFNSDL---ARLQKAFPQGRTL---- 94 ++ K + K++ L+ + I I++ ++ L RL + G Sbjct: 558 DRDVKPWYSGKMQVLDRMLARIRADTNDKIVLISNYTQTLDLFERLCRNRQYGCLRLDGT 617 Query: 95 ---DKDPCTIQEWN--EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIE 149 +K + ++N EG + + G GLNL G N LV F W+ QQ + Sbjct: 618 MNVNKRQKLVDKFNDPEGDEFVFLLSSKAGGCGLNL-IGANRLVLFDPDWNPAADQQALA 676 Query: 150 RIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIH 204 R+ + G K+ FVY IA TI+E + QR K ++ ++++ + H Sbjct: 677 RVW-----RDGQKKDCFVYRFIATGTIEEKIFQRQSHKQSLSSCVVDSAEDVERH 726 >gi|256028234|ref|ZP_05442068.1| SWF/SNF family helicase [Fusobacterium sp. D11] gi|289766166|ref|ZP_06525544.1| SWF/SNF family helicase [Fusobacterium sp. D11] gi|289717721|gb|EFD81733.1| SWF/SNF family helicase [Fusobacterium sp. D11] Length = 899 Score = 115 bits (287), Expect = 6e-24, Method: Composition-based stats. Identities = 40/210 (19%), Positives = 85/210 (40%), Gaps = 25/210 (11%) Query: 2 KQYHKFQRELYCDLQGENIEAFN-----SASKTVKCLQLANGAVYYDEEKHWKEVHDEKI 56 + Y + ++ Y L+ + N + + + E + K + +K Sbjct: 680 RFYEERRKYYYSLLEKNTLSQGNFDKFFVLQAINELRHIVSSP----ELESKKIISSKKE 735 Query: 57 KALEVIIEK-ANAAPIIVAYHFNSDLARLQKAFPQ---------GRTLDKDPCTIQEWNE 106 +E +IE N ++V ++ S + + + + G+T D+ + N+ Sbjct: 736 VLIENVIEAIENNHKVLVFVNYLSSIESICDSLKENKIKYLKMTGQTKDRQNLVDKFQND 795 Query: 107 GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVF 166 + + + G GLNL + + + WW+ Q I+R + G + VF Sbjct: 796 SRYKVFVMTLKTGGVGLNL-VSADTIFIYDPWWNTTVENQAIDR-----AYRLGQDKTVF 849 Query: 167 VYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 Y +I +NTI+E +L+ K+ + D L++ Sbjct: 850 AYKMIMRNTIEEKILKLQEIKNKLLDDLIS 879 >gi|238503530|ref|XP_002382998.1| SNF2 family helicase/ATPase (Ino80), putative [Aspergillus flavus NRRL3357] gi|220690469|gb|EED46818.1| SNF2 family helicase/ATPase (Ino80), putative [Aspergillus flavus NRRL3357] Length = 1553 Score = 115 bits (287), Expect = 6e-24, Method: Composition-based stats. Identities = 28/161 (17%), Positives = 63/161 (39%), Gaps = 19/161 (11%) Query: 50 EVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAF---------PQGRTL--DK 96 K+ L+ ++ + A +++ + + +++ G T D+ Sbjct: 1325 VTDSGKLAKLDELLRELKAGGHRVLLYFQMTRMIDLMEEYLTYRNYKYCRLDGSTKLEDR 1384 Query: 97 DPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 +I + + G G+NL + ++F+ W+ Q ++R Sbjct: 1385 RDTVADFQQRPEIFVFLLSTRAGGLGINLT-AADTVIFYDSDWNPTIDSQAMDR-----A 1438 Query: 157 RQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + G R V VY LI + TI+E + +R K +Q ++++ Sbjct: 1439 HRLGQTRQVTVYRLITRGTIEERIRKRALQKEEVQRVVISG 1479 >gi|225557800|gb|EEH06085.1| DNA ATP-dependent helicase [Ajellomyces capsulatus G186AR] Length = 1676 Score = 115 bits (287), Expect = 6e-24, Method: Composition-based stats. Identities = 26/161 (16%), Positives = 63/161 (39%), Gaps = 19/161 (11%) Query: 50 EVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQKAF---------PQGRTL--DK 96 K+ L+ ++ + +++ + + +++ G T D+ Sbjct: 1377 VTDSGKLAKLDELLRELKNGGHRVLLYFQMTRMIDLMEEYLTYRNYKYCRLDGSTKLEDR 1436 Query: 97 DPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 + +I + + G G+NL + ++F+ W+ Q ++R Sbjct: 1437 RDTVLDFQQRPEIFVFLLSTRAGGLGINLT-AADTVIFYDSDWNPTIDSQAMDR-----A 1490 Query: 157 RQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + G + V VY LI + TI+E + +R K +Q ++++ Sbjct: 1491 HRLGQTKQVTVYRLITRGTIEERIRKRALQKEEVQRVVISG 1531 >gi|229489423|ref|ZP_04383286.1| Non-specific serine/threonine protein kinase [Rhodococcus erythropolis SK121] gi|229323520|gb|EEN89278.1| Non-specific serine/threonine protein kinase [Rhodococcus erythropolis SK121] Length = 609 Score = 114 bits (286), Expect = 6e-24, Method: Composition-based stats. Identities = 33/210 (15%), Positives = 67/210 (31%), Gaps = 23/210 (10%) Query: 2 KQYHKFQRELYCDLQGENIEA-FNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 + Y + + G I N + Q+ N + K+ Sbjct: 378 RIYRSAVADAFDSGLGTGIARRGNILALLTTLKQVCNHPAQVTGDTDDLYGRSGKLDRAT 437 Query: 61 VIIEK--ANAAPIIVAYHFNSDLARLQKAFP------------QGRTLDKDPCTIQEWNE 106 +I + + ++ + + L + G DK + + Sbjct: 438 EMISEIVDDGDRALIFTQYRTMGEMLSRHLGAELGIGAVPFLHGGLNTDKRDAMVDAFQN 497 Query: 107 G--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA 164 P+L + G GLNL + +V + WW+ Q +R + G KR Sbjct: 498 DTDSPPVLILSLRAAGFGLNLTRASH-VVHYDRWWNPAVEDQATDR-----AHRIGQKRT 551 Query: 165 VFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 V V+ L+ T+++ + +K + D + Sbjct: 552 VNVHTLVTGGTVEDHIAAMHESKRAVADAV 581 >gi|62185488|ref|YP_220273.1| putative helicase [Chlamydophila abortus S26/3] gi|62148555|emb|CAH64326.1| putative helicase [Chlamydophila abortus S26/3] Length = 1165 Score = 114 bits (286), Expect = 6e-24, Method: Composition-based stats. Identities = 30/185 (16%), Positives = 70/185 (37%), Gaps = 18/185 (9%) Query: 24 NSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDL 81 + + + Q+ + + + K L ++ ++ + L Sbjct: 969 HVLATLTRLKQICCHPAIF-AKDVPEPGDSAKYDLLMDLLSSLVETGHKTVLFSQYTKML 1027 Query: 82 ARLQK---------AFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNIL 132 + ++K + G T ++ Q + + + + G GLNL G + + Sbjct: 1028 SIIKKDLEARGVRFVYLDGSTKNRLEIVNQFNEDPGLLVFLISLKAGGTGLNL-VGADTV 1086 Query: 133 VFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQD 192 + + +WW+ Q +R+ + G R+V Y L+ NTI+E +L K ++ Sbjct: 1087 IHYDMWWNPAVENQATDRV-----HRIGQNRSVSSYKLVTLNTIEEKILTLQNRKKSLVK 1141 Query: 193 LLLNA 197 ++N+ Sbjct: 1142 KVINS 1146 >gi|54022998|ref|YP_117240.1| putative helicase [Nocardia farcinica IFM 10152] gi|54014506|dbj|BAD55876.1| putative helicase [Nocardia farcinica IFM 10152] Length = 956 Score = 114 bits (286), Expect = 6e-24, Method: Composition-based stats. Identities = 38/216 (17%), Positives = 75/216 (34%), Gaps = 26/216 (12%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASK--TVKCLQLANGAVYYDEEKHWK----EVHDEK 55 Y ++ L+ A A + Q+ N ++ + K Sbjct: 721 ALYQAVVDDMLVKLRSAKGMARKGAVLGALTRLKQVCNHPAHFLGDGSPVLHRGRHRSGK 780 Query: 56 IKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQ-----------GRTLDKDPCTIQ 102 + +E +++ A+ ++ F L + G T ++ Sbjct: 781 LALVEDVLDTVVADGEKALLFTQFREFGDLLAPYLSERFGAPIPFLHGGVTKKNRDTMVE 840 Query: 103 EWNEGK-IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGF 161 + G P++ + G GL L N +V WW+ Q +R + G Sbjct: 841 RFQSGDGPPVMLLSLKAGGTGLTLT-AANHVVHLDRWWNPAVENQATDR-----AFRIGQ 894 Query: 162 KRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 +R V V L+ +TI+E + + + KS + DL ++A Sbjct: 895 RRDVQVRKLVCVDTIEERIDEMITGKSRLADLAVDA 930 >gi|329943255|ref|ZP_08292029.1| type III restriction enzyme, res subunit [Chlamydophila psittaci Cal10] gi|313848406|emb|CBY17410.1| putative helicase [Chlamydophila psittaci RD1] gi|325506467|gb|ADZ18105.1| SNF2 family helicase [Chlamydophila psittaci 6BC] gi|328814802|gb|EGF84792.1| type III restriction enzyme, res subunit [Chlamydophila psittaci Cal10] Length = 1165 Score = 114 bits (286), Expect = 6e-24, Method: Composition-based stats. Identities = 30/185 (16%), Positives = 70/185 (37%), Gaps = 18/185 (9%) Query: 24 NSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDL 81 + + + Q+ + + + K L ++ ++ + L Sbjct: 969 HVLATLTRLKQICCHPAIF-AKDVPEPGDSAKYDLLMDLLSSLVETGHKTVLFSQYTKML 1027 Query: 82 ARLQK---------AFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNIL 132 + ++K + G T ++ Q + + + + G GLNL G + + Sbjct: 1028 SIIKKDLEARGVRFVYLDGSTKNRLEIVNQFNEDPGLLVFLISLKAGGTGLNL-VGADTV 1086 Query: 133 VFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQD 192 + + +WW+ Q +R+ + G R+V Y L+ NTI+E +L K ++ Sbjct: 1087 IHYDMWWNPAVENQATDRV-----HRIGQNRSVSSYKLVTLNTIEEKILTLQNRKKSLVK 1141 Query: 193 LLLNA 197 ++N+ Sbjct: 1142 KVINS 1146 >gi|289620805|emb|CBI52539.1| putative RAD54 protein [Sordaria macrospora] Length = 824 Score = 114 bits (286), Expect = 6e-24, Method: Composition-based stats. Identities = 41/175 (23%), Positives = 74/175 (42%), Gaps = 21/175 (12%) Query: 45 EKHWKEVHDEKIKALEVI---IEKANAAPIIVAYHFNSDL---ARLQKAFPQGRTL---- 94 ++ K + K++ L+ + I I++ ++ L RL + G Sbjct: 555 DRDVKPWYSGKMQVLDRMLARIRADTNDKIVLISNYTQTLDLFERLCRNRQYGCLRLDGT 614 Query: 95 ---DKDPCTIQEWN--EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIE 149 +K + ++N EG+ + + G GLNL G N LV F W+ QQ + Sbjct: 615 MNVNKRQKLVDKFNDPEGEEFVFLLSSKAGGCGLNL-IGANRLVLFDPDWNPAADQQALA 673 Query: 150 RIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIH 204 R+ + G K+ FVY IA TI+E + QR K ++ ++++ + H Sbjct: 674 RVW-----RDGQKKDCFVYRFIATGTIEEKIFQRQSHKQSLSSCVVDSAEDVERH 723 >gi|190570762|ref|YP_001975120.1| helicase, SNF2 family [Wolbachia endosymbiont of Culex quinquefasciatus Pel] gi|190357034|emb|CAQ54427.1| helicase, SNF2 family [Wolbachia endosymbiont of Culex quinquefasciatus Pel] Length = 1178 Score = 114 bits (286), Expect = 6e-24, Method: Composition-based stats. Identities = 31/187 (16%), Positives = 72/187 (38%), Gaps = 22/187 (11%) Query: 26 ASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVI---IEKANAAPIIVAYHFNSDLA 82 Q+ N ++ ++K K++ LE I I + ++ + Sbjct: 976 LKLINALKQVCNHPSHFGKKKRASIEQSGKMQMLEEILIGISELAEKS-LIFTQYTEMGE 1034 Query: 83 RLQKAFPQ-----------GRTLDKDPCTIQEW-NEGKIPLLFAHPASCGHGLNLQYGGN 130 + + + + + ++ N + +L + G GLNL N Sbjct: 1035 IIARLLEEKFESKVPFLHGSLSRKARDKMVNDFENSFRSNILIVSLKAGGTGLNLT-AAN 1093 Query: 131 ILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 ++ + LWW+ Q +R + G +R V VY L++ T +E + + +++K + Sbjct: 1094 HVIHYDLWWNPAVEAQATDR-----AYRIGQERNVMVYRLLSTGTFEERIDEMIQSKKEL 1148 Query: 191 QDLLLNA 197 +L +++ Sbjct: 1149 ANLTISS 1155 >gi|212535682|ref|XP_002147997.1| SNF2 family helicase/ATPase (Ino80), putative [Penicillium marneffei ATCC 18224] gi|210070396|gb|EEA24486.1| SNF2 family helicase/ATPase (Ino80), putative [Penicillium marneffei ATCC 18224] Length = 2500 Score = 114 bits (286), Expect = 7e-24, Method: Composition-based stats. Identities = 27/161 (16%), Positives = 63/161 (39%), Gaps = 19/161 (11%) Query: 50 EVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQKAF---------PQGRTL--DK 96 K+ L+ ++ + +++ + + +++ G T D+ Sbjct: 2211 VTDSGKLAKLDELLRELKNGGHRVLLYFQMTRMIDLMEEYLTYRNYKYCRLDGSTKLEDR 2270 Query: 97 DPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 + +I + + G G+NL + ++F+ W+ Q ++R Sbjct: 2271 RDTVADFQHRPEIFVFLLSTRAGGLGINLT-AADTVIFYDSDWNPTIDSQAMDR-----A 2324 Query: 157 RQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + G R V VY LI + TI+E + +R K +Q ++++ Sbjct: 2325 HRLGQTRQVTVYRLITRGTIEERIRKRALQKEEVQRVVISG 2365 >gi|282899415|ref|ZP_06307382.1| SNF2-related helicase [Cylindrospermopsis raciborskii CS-505] gi|281195679|gb|EFA70609.1| SNF2-related helicase [Cylindrospermopsis raciborskii CS-505] Length = 1081 Score = 114 bits (286), Expect = 7e-24, Method: Composition-based stats. Identities = 35/188 (18%), Positives = 76/188 (40%), Gaps = 23/188 (12%) Query: 26 ASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLAR 83 S VK Q+ N Y E ++ K++ L+ ++E+ A + ++ F ++L + Sbjct: 871 LSLLVKLKQICNHPAQYLHESSLEKYSSAKLQRLQEMLEEVIAEKSRALIFTQF-AELGK 929 Query: 84 LQK-----------AFPQGRT-LDKDPCTIQEWNEGKI--PLLFAHPASCGHGLNLQYGG 129 L + F G T + + + + P++ + G GLNL Sbjct: 930 LLQPYLAKHLDREIFFLYGTTGKKQREEMVDRFQQDPQGPPIMILSLKAGGVGLNLTR-A 988 Query: 130 NILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKST 189 N + F WW+ Q +R + G + V V+ + + T++E + + +K Sbjct: 989 NYVFHFDRWWNPAVENQATDR-----AFRIGQTQNVQVHKFVCRGTLEEKIHDMIESKKQ 1043 Query: 190 IQDLLLNA 197 + ++++ Sbjct: 1044 LAQQVISS 1051 >gi|119181996|ref|XP_001242158.1| hypothetical protein CIMG_06054 [Coccidioides immitis RS] gi|121937034|sp|Q1DUF9|INO80_COCIM RecName: Full=Putative DNA helicase INO80 Length = 1662 Score = 114 bits (286), Expect = 7e-24, Method: Composition-based stats. Identities = 26/161 (16%), Positives = 62/161 (38%), Gaps = 19/161 (11%) Query: 50 EVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQKAF---------PQGRTL--DK 96 K+ L+ ++ + +++ + + +++ G T D+ Sbjct: 1376 VTDSGKLAKLDELLRELKNGGHRVLLYFQMTRMIDLMEEYLTYRNYKYCRLDGSTKLEDR 1435 Query: 97 DPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 +I + + G G+NL + ++F+ W+ Q ++R Sbjct: 1436 RDTVSDFQQRPEIFVFLLSTRAGGLGINLT-AADTVIFYDSDWNPTIDSQAMDR-----A 1489 Query: 157 RQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + G + V VY LI + TI+E + +R K +Q ++++ Sbjct: 1490 HRLGQTKQVTVYRLITRGTIEERIRKRALQKEEVQRVVISG 1530 >gi|256375189|ref|YP_003098849.1| Non-specific serine/threonine protein kinase [Actinosynnema mirum DSM 43827] gi|255919492|gb|ACU35003.1| Non-specific serine/threonine protein kinase [Actinosynnema mirum DSM 43827] Length = 1028 Score = 114 bits (286), Expect = 7e-24, Method: Composition-based stats. Identities = 32/209 (15%), Positives = 66/209 (31%), Gaps = 22/209 (10%) Query: 3 QYHKFQRELYCDLQGENIEAFNSASK--TVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 Y ++ + G + K Q+ N + K+ LE Sbjct: 798 LYQAVLDDMLAKVDGSEGQERRGLVLASLSKLKQVCNHPAQLLGDGSRVAGRSGKVNRLE 857 Query: 61 VIIEK--ANAAPIIVAYHFNSDLARLQKAFP-----------QGRTLDKDPCTIQEWN-E 106 ++E+ A+ + F + L G ++ + E Sbjct: 858 EVLEEVLADGDKALCFTQFTEFGSLLAPHLSARFDTDVLFLHGGTPKRARDAMVERFQGE 917 Query: 107 GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVF 166 G + + G GLNL N ++ WW+ Q +R + G +R V Sbjct: 918 GGPSVFLLSLKAGGTGLNLT-AANHVIHLDRWWNPAVEDQATDR-----AFRIGQRRHVQ 971 Query: 167 VYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 V + T++E + + + K + +++ Sbjct: 972 VRKFVCAGTVEERIDRMVEQKRGLARMVV 1000 >gi|258572046|ref|XP_002544805.1| potential DNA-dependent ATPase Ino80p [Uncinocarpus reesii 1704] gi|237905075|gb|EEP79476.1| potential DNA-dependent ATPase Ino80p [Uncinocarpus reesii 1704] Length = 1668 Score = 114 bits (286), Expect = 7e-24, Method: Composition-based stats. Identities = 27/161 (16%), Positives = 62/161 (38%), Gaps = 19/161 (11%) Query: 50 EVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQKAF---------PQGRTL--DK 96 K+ L+ ++ + +++ + + +++ G T D+ Sbjct: 1384 VTDSGKLAKLDELLRELKNGGHRVLLYFQMTRMIDLMEEYLTYRNYKYCRLDGSTKLEDR 1443 Query: 97 DPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 +I + + G G+NL + ++F+ W+ Q ++R Sbjct: 1444 RDTVSDFQQRPEIFVFLLSTRAGGLGINLT-AADTVIFYDSDWNPTIDSQAMDR-----A 1497 Query: 157 RQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + G R V VY LI + TI+E + +R K +Q ++++ Sbjct: 1498 HRLGQTRQVTVYRLITRGTIEERIRKRALQKEEVQRVVISG 1538 >gi|256846855|ref|ZP_05552310.1| SWF/SNF family helicase [Fusobacterium sp. 3_1_36A2] gi|256717821|gb|EEU31379.1| SWF/SNF family helicase [Fusobacterium sp. 3_1_36A2] Length = 899 Score = 114 bits (286), Expect = 7e-24, Method: Composition-based stats. Identities = 40/210 (19%), Positives = 85/210 (40%), Gaps = 25/210 (11%) Query: 2 KQYHKFQRELYCDLQGENIEAFN-----SASKTVKCLQLANGAVYYDEEKHWKEVHDEKI 56 + Y + ++ Y L+ N + + + E ++ K + +K Sbjct: 680 RFYEERRKYYYSLLEKNTSSQGNFDKFFVLQAINELRHIVSSP----ELENKKIISSKKE 735 Query: 57 KALEVIIEK-ANAAPIIVAYHFNSDLARLQKAFPQ---------GRTLDKDPCTIQEWNE 106 +E +IE N ++V ++ S + + + + G+T D+ + N+ Sbjct: 736 VLIENVIEAIENNHKVLVFVNYLSSIESICDSLKENKIKYLKMTGQTKDRQNLVDKFQND 795 Query: 107 GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVF 166 + + + G GLNL + + + WW+ Q I+R + G + VF Sbjct: 796 SRYKVFVMTLKTGGVGLNL-VSADTIFIYDPWWNTTVENQAIDR-----AYRLGQDKTVF 849 Query: 167 VYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 Y +I +NTI+E +L+ K+ + D L++ Sbjct: 850 AYKMIMRNTIEEKILKLQEIKNKLLDDLIS 879 >gi|322707957|gb|EFY99534.1| recombinational repair protein [Metarhizium anisopliae ARSEF 23] Length = 807 Score = 114 bits (286), Expect = 7e-24, Method: Composition-based stats. Identities = 38/159 (23%), Positives = 67/159 (42%), Gaps = 19/159 (11%) Query: 58 ALEVIIEKANAAPIIVAYHFNSDL---ARLQKAFPQGRTL-------DKDPCTIQEWN-- 105 L I + N +++ ++ S L RL ++ G +K + +N Sbjct: 572 MLARIRQDTNDKIVLI-SNYTSTLDLFERLCRSREYGCLRLDGTMNVNKRQKLVDRFNDP 630 Query: 106 EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 G+ + + G G+NL G N LV F W+ QQ + R+ + G K+ Sbjct: 631 NGEEFVFLLSSKAGGCGINL-IGANRLVLFDPDWNPAADQQALARVW-----RDGQKKDC 684 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIH 204 FVY IA TI+E + QR K ++ ++++ + H Sbjct: 685 FVYRFIATGTIEEKIFQRQSHKQSLSSCVVDSAEDVERH 723 >gi|294786039|ref|ZP_06751326.1| Snf2 family protein [Fusobacterium sp. 3_1_27] gi|294486376|gb|EFG33739.1| Snf2 family protein [Fusobacterium sp. 3_1_27] Length = 899 Score = 114 bits (285), Expect = 8e-24, Method: Composition-based stats. Identities = 40/210 (19%), Positives = 85/210 (40%), Gaps = 25/210 (11%) Query: 2 KQYHKFQRELYCDLQGENIEAFN-----SASKTVKCLQLANGAVYYDEEKHWKEVHDEKI 56 + Y + ++ Y L+ N + + + E ++ K + +K Sbjct: 680 RFYEERRKYYYSLLEKNTSSQGNFDKFFVLQAINELRHIVSSP----ELENKKIISSKKE 735 Query: 57 KALEVIIEK-ANAAPIIVAYHFNSDLARLQKAFPQ---------GRTLDKDPCTIQEWNE 106 +E +IE N ++V ++ S + + + + G+T D+ + N+ Sbjct: 736 VLIENVIEAIENNHKVLVFVNYLSSIESICDSLKENKIKYLKMTGQTKDRQNLVDKFQND 795 Query: 107 GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVF 166 + + + G GLNL + + + WW+ Q I+R + G + VF Sbjct: 796 SRYKVFVMTLKTGGVGLNL-VSADTIFIYDPWWNTTVENQAIDR-----AYRLGQDKTVF 849 Query: 167 VYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 Y +I +NTI+E +L+ K+ + D L++ Sbjct: 850 AYKMIMRNTIEEKILKLQEIKNKLLDDLIS 879 >gi|237740914|ref|ZP_04571395.1| SWF/SNF family helicase [Fusobacterium sp. 4_1_13] gi|229431211|gb|EEO41423.1| SWF/SNF family helicase [Fusobacterium sp. 4_1_13] Length = 899 Score = 114 bits (285), Expect = 8e-24, Method: Composition-based stats. Identities = 40/210 (19%), Positives = 85/210 (40%), Gaps = 25/210 (11%) Query: 2 KQYHKFQRELYCDLQGENIEAFN-----SASKTVKCLQLANGAVYYDEEKHWKEVHDEKI 56 + Y + ++ Y L+ N + + + E ++ K + +K Sbjct: 680 RFYEERRKYYYSLLEKNTSSQGNFDKFFVLQAINELRHIVSSP----ELENKKIISSKKE 735 Query: 57 KALEVIIEK-ANAAPIIVAYHFNSDLARLQKAFPQ---------GRTLDKDPCTIQEWNE 106 +E +IE N ++V ++ S + + + + G+T D+ + N+ Sbjct: 736 VLIENVIEAIENNHKVLVFVNYLSSIESICDSLKENKIKYLKMTGQTKDRQNLVDKFQND 795 Query: 107 GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVF 166 + + + G GLNL + + + WW+ Q I+R + G + VF Sbjct: 796 SRYKVFVMTLKTGGVGLNL-VSADTIFIYDPWWNTTVENQAIDR-----AYRLGQDKTVF 849 Query: 167 VYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 Y +I +NTI+E +L+ K+ + D L++ Sbjct: 850 AYKMIMRNTIEEKILKLQEIKNKLLDDLIS 879 >gi|34763541|ref|ZP_00144479.1| SWF/SNF family helicase [Fusobacterium nucleatum subsp. vincentii ATCC 49256] gi|27886790|gb|EAA23925.1| SWF/SNF family helicase [Fusobacterium nucleatum subsp. vincentii ATCC 49256] Length = 899 Score = 114 bits (285), Expect = 8e-24, Method: Composition-based stats. Identities = 40/210 (19%), Positives = 85/210 (40%), Gaps = 25/210 (11%) Query: 2 KQYHKFQRELYCDLQGENIEAFN-----SASKTVKCLQLANGAVYYDEEKHWKEVHDEKI 56 + Y + ++ Y L+ N + + + E ++ K + +K Sbjct: 680 RFYEERRKYYYSLLEKNTSSQGNFDKFFVLQAINELRHIVSSP----ELENKKIISSKKE 735 Query: 57 KALEVIIEK-ANAAPIIVAYHFNSDLARLQKAFPQ---------GRTLDKDPCTIQEWNE 106 +E +IE N ++V ++ S + + + + G+T D+ + N+ Sbjct: 736 VLIENVIEAIENNHKVLVFVNYLSSIESICDSLKENKIKYLKMTGQTKDRQNLVDKFQND 795 Query: 107 GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVF 166 + + + G GLNL + + + WW+ Q I+R + G + VF Sbjct: 796 SRYKVFVMTLKTGGVGLNL-VSADTIFIYDPWWNTTVENQAIDR-----AYRLGQDKTVF 849 Query: 167 VYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 Y +I +NTI+E +L+ K+ + D L++ Sbjct: 850 AYKMIMRNTIEEKILKLQEIKNKLLDDLIS 879 >gi|224139776|ref|XP_002323271.1| chromatin remodeling complex subunit [Populus trichocarpa] gi|222867901|gb|EEF05032.1| chromatin remodeling complex subunit [Populus trichocarpa] Length = 1540 Score = 114 bits (285), Expect = 8e-24, Method: Composition-based stats. Identities = 30/160 (18%), Positives = 67/160 (41%), Gaps = 19/160 (11%) Query: 51 VHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAF----------PQGRTLDKDP 98 K++ L++++++ A +++ L L+ T+ Sbjct: 1214 TDSGKLQTLDILLKRLRAENHRVLLFAQMTKMLNILEDYMNYRKYRYLRLDGSSTIMDRR 1273 Query: 99 CTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 ++++ I + + G G+NL + ++F+ W+ Q ++R Sbjct: 1274 DMVRDFQLRNDIFVFLLSTRAGGLGINLT-AADTVIFYESDWNPTLDLQAMDR-----AH 1327 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + G + V VY LI + T++E +LQR K+T+Q L++ Sbjct: 1328 RLGQTKDVTVYRLICKETVEEKILQRASQKNTVQQLVMTG 1367 >gi|254304375|ref|ZP_04971733.1| Snf2 family helicase [Fusobacterium nucleatum subsp. polymorphum ATCC 10953] gi|148324567|gb|EDK89817.1| Snf2 family helicase [Fusobacterium nucleatum subsp. polymorphum ATCC 10953] Length = 899 Score = 114 bits (285), Expect = 8e-24, Method: Composition-based stats. Identities = 40/210 (19%), Positives = 84/210 (40%), Gaps = 25/210 (11%) Query: 2 KQYHKFQRELYCDLQGENIEAFN-----SASKTVKCLQLANGAVYYDEEKHWKEVHDEKI 56 + Y + ++ Y L+ N + + + E + K + +K Sbjct: 680 RFYEERRKYYYSLLEKNTSSQGNFDKFFVLQAINELRHIVSSP----ELETKKIISSKKE 735 Query: 57 KALEVIIEK-ANAAPIIVAYHFNSDLARLQKAFPQ---------GRTLDKDPCTIQEWNE 106 +E +IE N ++V ++ S + + + + G+T D+ + N+ Sbjct: 736 VLIENVIEAIENNHKVLVFVNYLSSIESICDSLKENKIKYLKMTGQTKDRQNLVDKFQND 795 Query: 107 GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVF 166 + + + G GLNL + + + WW+ Q I+R + G + VF Sbjct: 796 SRYKVFVMTLKTGGVGLNL-VSADTIFIYDPWWNTTVENQAIDR-----AYRLGQDKTVF 849 Query: 167 VYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 Y +I +NTI+E +L+ K+ + D L++ Sbjct: 850 AYKMIMRNTIEEKILKLQEIKNKLLDDLIS 879 >gi|189091948|ref|XP_001929807.1| hypothetical protein [Podospora anserina S mat+] gi|27803083|emb|CAD60786.1| unnamed protein product [Podospora anserina] gi|188219327|emb|CAP49307.1| unnamed protein product [Podospora anserina S mat+] Length = 800 Score = 114 bits (285), Expect = 8e-24, Method: Composition-based stats. Identities = 41/175 (23%), Positives = 75/175 (42%), Gaps = 21/175 (12%) Query: 45 EKHWKEVHDEKIKALEVI---IEKANAAPIIVAYHFNSDLARLQK-----AFPQGRT--- 93 ++ K + K++ L+ + I I++ ++ L +K A+P R Sbjct: 548 DRDIKPWYSGKMQVLDRMLARIRADTNDKIVLISNYTQTLDLFEKLCRSRAYPCLRLDGK 607 Query: 94 --LDKDPCTIQEWN--EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIE 149 ++K + ++N G + + G GLNL G N LV F W+ QQ + Sbjct: 608 MLVNKRQKLVDKFNDPNGDEFVFLLSSKAGGCGLNL-IGANRLVLFDPDWNPAADQQALA 666 Query: 150 RIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIH 204 R+ + G K+ FVY IA TI+E + QR K ++ ++++ + H Sbjct: 667 RVW-----RDGQKKDCFVYRFIATGTIEEKIFQRQSHKQSLSSCVVDSAEDVERH 716 >gi|327308794|ref|XP_003239088.1| DNA repair and recombination protein RAD54 [Trichophyton rubrum CBS 118892] gi|326459344|gb|EGD84797.1| DNA repair and recombination protein RAD54 [Trichophyton rubrum CBS 118892] Length = 808 Score = 114 bits (285), Expect = 8e-24, Method: Composition-based stats. Identities = 41/181 (22%), Positives = 71/181 (39%), Gaps = 18/181 (9%) Query: 36 ANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDL---ARLQKAFPQGR 92 +NG E K W + + I + I++ ++ L RL +A G Sbjct: 546 SNGRRGDREAKTWYSGKMMVLDRMLARIRQDTNDKIVLISNYTQTLDLFERLCRARAYGC 605 Query: 93 TL-------DKDPCTIQEWN--EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEE 143 K + ++N G+ + + G G+NL G N LV F W+ Sbjct: 606 IRLDGTMGVKKRSKLVDKFNDPNGEEFVFLLSSKAGGCGINL-VGANRLVLFDPDWNPAA 664 Query: 144 HQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETI 203 QQ + R+ + G + FVY IA TI+E + QR K ++ ++++ + Sbjct: 665 DQQALARVW-----RDGQSKDCFVYRFIATGTIEEKIFQRQSHKQSLSSCVIDSAEDVER 719 Query: 204 H 204 H Sbjct: 720 H 720 >gi|75909484|ref|YP_323780.1| SNF2-like helicase [Anabaena variabilis ATCC 29413] gi|75703209|gb|ABA22885.1| SNF2-related helicase [Anabaena variabilis ATCC 29413] Length = 1078 Score = 114 bits (285), Expect = 8e-24, Method: Composition-based stats. Identities = 37/221 (16%), Positives = 76/221 (34%), Gaps = 31/221 (14%) Query: 2 KQYHKFQRELYCDLQGENIEAFNS--ASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKAL 59 Y K +++ + +K Q+ N Y + ++ K++ L Sbjct: 834 ALYQKVVETSLAEIESAEGLQRRGMILALLIKLKQICNHPAQYLKTNTLEQYSSGKLQRL 893 Query: 60 EVIIEK----------ANAAPIIVAYHFNSDLARLQKAFPQ--GRT---------LDKDP 98 E ++E+ A A ++ F L+ + GR + Sbjct: 894 EEMLEEVLAESNTYGVAGAGRALIFTQFAEWGKLLKPHLEKQLGREVFFLYGSTSKKQRE 953 Query: 99 CTIQEWNEGKI--PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 I + P++ + G GLNL N + F WW+ Q +R+ Sbjct: 954 EMIDRFQHDPQGPPIMILSLKAGGVGLNLTR-ANHVFHFDRWWNPAVENQATDRVF---- 1008 Query: 157 RQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + G R V V+ + T++E + + +K + + ++ A Sbjct: 1009 -RIGQTRNVQVHKFVCNGTLEEKIHDMIESKKQLAEQVVGA 1048 >gi|51891795|ref|YP_074486.1| SNF2 family helicase [Symbiobacterium thermophilum IAM 14863] gi|51855484|dbj|BAD39642.1| SNF2 family helicase [Symbiobacterium thermophilum IAM 14863] Length = 989 Score = 114 bits (285), Expect = 8e-24, Method: Composition-based stats. Identities = 36/209 (17%), Positives = 66/209 (31%), Gaps = 22/209 (10%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASK--TVKCLQLANGAVYYDEEKHWKEVHDEKIKAL 59 Y +E + +A + Q+ N KI L Sbjct: 763 ALYEAIVQETLERAAQADGIQRQAAVLAGLTRLKQVCNHPA-AATGDGPLVGRSGKIDRL 821 Query: 60 EVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQ-----------GRTLDKDPCTIQEWNE 106 ++++ A ++ F RLQ + G + + + Sbjct: 822 VQLLQEVLAAGEQALLFTQFARFGGRLQAYLAETLGCEVLFLHGGTPQPERDRLVARFQA 881 Query: 107 GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVF 166 G+ PL + G GLNL + + WW+ Q +R + G R V Sbjct: 882 GEAPLFILSLKAGGLGLNLTAATH-VFHVDRWWNPAVEDQATDR-----AYRIGQTRRVL 935 Query: 167 VYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 V+ LI T++E + + L K + ++ Sbjct: 936 VHRLITAGTLEERIDRLLAEKRALAGQVI 964 >gi|302695791|ref|XP_003037574.1| hypothetical protein SCHCODRAFT_65034 [Schizophyllum commune H4-8] gi|300111271|gb|EFJ02672.1| hypothetical protein SCHCODRAFT_65034 [Schizophyllum commune H4-8] Length = 1161 Score = 114 bits (285), Expect = 8e-24, Method: Composition-based stats. Identities = 31/157 (19%), Positives = 68/157 (43%), Gaps = 19/157 (12%) Query: 52 HDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGR----------TLDKDPC 99 K+ L+ ++++ A+ +++ + L++ + ++ Sbjct: 910 DSGKLSGLDTLLQQLKADGHRVLLYSQMTKLMDILEEYLIYRQYKYLRLDGSCKVETRRD 969 Query: 100 TIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQ 158 + +W + + + + G G+NL + +VF+ W+ Q ++R + Sbjct: 970 LVNDWQTKPEYFVFLLSTKAGGVGINLT-AADTVVFYDHDWNPSNDAQAMDR-----AHR 1023 Query: 159 AGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 G R V VY LI +NT+DE VL+ R K +QD+++ Sbjct: 1024 LGQTRQVTVYRLICRNTVDERVLKMARRKKDVQDVVV 1060 >gi|229119309|ref|ZP_04248612.1| hypothetical protein bcere0017_55440 [Bacillus cereus Rock1-3] gi|228664175|gb|EEL19713.1| hypothetical protein bcere0017_55440 [Bacillus cereus Rock1-3] Length = 408 Score = 114 bits (285), Expect = 8e-24, Method: Composition-based stats. Identities = 41/196 (20%), Positives = 84/196 (42%), Gaps = 20/196 (10%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEV 61 K Y +F++ ++ E + A+K + QLA ++ K++ ++ Sbjct: 227 KLYKEFKKHHIVEIGEELLLGDTPAAKKLYLRQLAGS------------YNENKLQYVKD 274 Query: 62 IIEKANAAPIIVAYHFNSDLARLQKAFPQG-RTLDKDPCTIQEWNEGKIPLLFAHPASCG 120 ++E N II+ Y+F + L + T++ + + + + + + + Sbjct: 275 LVESTNDR-IIIFYNFKKEYEALVDLIDKPISTVNGNLKDLTAYEKFENSVTLIQYQAGA 333 Query: 121 HGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELV 180 GLNLQ N +V+F+L E +Q +R + G +R F YYL+ +I+ + Sbjct: 334 MGLNLQK-ANKIVYFTLTDKSELFEQSKKR-----THRIGQERPCFYYYLLTDGSIEWRM 387 Query: 181 LQRLRTKSTIQDLLLN 196 L L+ + D+L Sbjct: 388 LDVLKERKDYTDVLFE 403 >gi|302658601|ref|XP_003021002.1| hypothetical protein TRV_04867 [Trichophyton verrucosum HKI 0517] gi|291184877|gb|EFE40384.1| hypothetical protein TRV_04867 [Trichophyton verrucosum HKI 0517] Length = 1522 Score = 114 bits (285), Expect = 9e-24, Method: Composition-based stats. Identities = 27/161 (16%), Positives = 63/161 (39%), Gaps = 19/161 (11%) Query: 50 EVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQKAF---------PQGRTL--DK 96 K+ L+ ++ + +++ + + +++ G T D+ Sbjct: 1233 VTDSGKLAKLDELLRELKNGGHRVLLYFQMTRMIDLMEEYLTYRNYKYCRLDGSTKLEDR 1292 Query: 97 DPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 + +I + + G G+NL + ++F+ W+ Q ++R Sbjct: 1293 RDTVLDFQQRPEIFIFLLSTRAGGLGINLT-AADTVIFYDSDWNPTIDSQAMDR-----A 1346 Query: 157 RQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + G R V VY LI + TI+E + +R K +Q ++++ Sbjct: 1347 HRLGQTRQVTVYRLITRGTIEERIRKRALQKEEVQRVVISG 1387 >gi|207345444|gb|EDZ72265.1| YGL150Cp-like protein [Saccharomyces cerevisiae AWRI1631] Length = 534 Score = 114 bits (285), Expect = 9e-24, Method: Composition-based stats. Identities = 26/158 (16%), Positives = 64/158 (40%), Gaps = 19/158 (12%) Query: 53 DEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQK----------AFPQGRTLDKDPCT 100 K++ L+ ++ K + +++ + + +++ L+ Sbjct: 343 SAKLRKLDELLVKLKSEGHRVLIYFQMTKMMDLMEEYLTYRQYNHIRLDGSSKLEDRRDL 402 Query: 101 IQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQA 159 + +W +I + + G G+NL + ++F+ W+ Q ++R + Sbjct: 403 VHDWQTNPEIFVFLLSTRAGGLGINLT-AADTVIFYDSDWNPTIDSQAMDR-----AHRL 456 Query: 160 GFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 G R V VY L+ + TI+E + R + K +Q +++ Sbjct: 457 GQTRQVTVYRLLVRGTIEERMRDRAKQKEQVQQVVMEG 494 >gi|153807263|ref|ZP_01959931.1| hypothetical protein BACCAC_01541 [Bacteroides caccae ATCC 43185] gi|149130383|gb|EDM21593.1| hypothetical protein BACCAC_01541 [Bacteroides caccae ATCC 43185] Length = 948 Score = 114 bits (285), Expect = 9e-24, Method: Composition-based stats. Identities = 35/191 (18%), Positives = 68/191 (35%), Gaps = 24/191 (12%) Query: 18 ENIEAFNSASKTVKCLQLANGA--VYYDEEKHWKEVHDEKIKALEVIIE--KANAAPIIV 73 + + +F+ + ++ QLA +Y D K + I + ++ +++ Sbjct: 750 DKLHSFSILNGILRLRQLACHPQLIYPDFNG-----ASGKAIQIIEIFDTLRSEGHKVLI 804 Query: 74 AYHFNSDLARLQKAFPQ---------GRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLN 124 F L L +AF + G T ++ + + + G GLN Sbjct: 805 FSSFVKHLEVLAEAFRERGWKYALLTGATNNRPSEIAHFTEQKDVQAFLISLKAGGVGLN 864 Query: 125 LQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRL 184 L + + WW+ Q I R + G + V Y I QN+I+E +L Sbjct: 865 LTQADYVFI-IDPWWNPAAESQAIAR-----AHRIGQDKQVIAYRFITQNSIEEKILYLQ 918 Query: 185 RTKSTIQDLLL 195 K + + + Sbjct: 919 DEKRKLAETFV 929 >gi|311896870|dbj|BAJ29278.1| putative truncated ATP-dependent helicase [Kitasatospora setae KM-6054] Length = 441 Score = 114 bits (285), Expect = 9e-24, Method: Composition-based stats. Identities = 39/211 (18%), Positives = 70/211 (33%), Gaps = 26/211 (12%) Query: 3 QYHKFQRELYCDLQG--ENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 Y +L L G + + Q+ N ++ K++ L Sbjct: 211 LYQAVVADLLDRLGGVRGVERKGAVLAALGRLKQVCNHPAQLLRDRSPLGGRSGKVERLV 270 Query: 61 VIIEKA--NAAPIIVAYHFNSDLARLQKAFPQGRTLD-------------KDPCTIQEWN 105 ++ +A ++V + A LQ R LD + + + Sbjct: 271 ALLREALAEGDRVLVFTQYAEFGALLQPHL--RRRLDTPVLYLHGGLSAPRRQELVDSFQ 328 Query: 106 EGKIP-LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA 164 P + + G GLNL N +V WW+ Q +R + G R Sbjct: 329 SPDGPRVFLLSLKAGGTGLNLT-AANQVVHLDRWWNPATEDQATDR-----AHRIGQHRD 382 Query: 165 VFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 V V L+ TI+E + + + TK + D ++ Sbjct: 383 VQVRKLVCTGTIEERIAELIDTKRELADSVV 413 >gi|302408325|ref|XP_003001997.1| DNA repair and recombination protein RAD54 [Verticillium albo-atrum VaMs.102] gi|261358918|gb|EEY21346.1| DNA repair and recombination protein RAD54 [Verticillium albo-atrum VaMs.102] Length = 857 Score = 114 bits (285), Expect = 9e-24, Method: Composition-based stats. Identities = 39/175 (22%), Positives = 75/175 (42%), Gaps = 21/175 (12%) Query: 45 EKHWKEVHDEKIKALEVI---IEKANAAPIIVAYHFNSDL---ARLQKAFPQGRTL---- 94 + K + K++ L+ + I + I++ ++ L RL ++ G Sbjct: 605 NREVKPWYSGKMQVLDRMLARIRQDTNDKIVLISNYTQTLDIFERLCRSRAYGCLRLDGT 664 Query: 95 ---DKDPCTIQEWNE--GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIE 149 +K + ++N+ G+ + + G G+NL G N LV F W+ QQ + Sbjct: 665 MNVNKRQKLVDKFNDPAGEEFVFLLSSKAGGCGINL-IGANRLVLFDPDWNPAADQQALA 723 Query: 150 RIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIH 204 R+ + G K+ FVY IA TI+E + QR K ++ ++++ + H Sbjct: 724 RVW-----RDGQKKDCFVYRFIATGTIEEKIFQRQSHKQSLSSCVVDSAEDVERH 773 >gi|255692899|ref|ZP_05416574.1| Snf2 family helicase [Bacteroides finegoldii DSM 17565] gi|260621348|gb|EEX44219.1| Snf2 family helicase [Bacteroides finegoldii DSM 17565] Length = 1010 Score = 114 bits (285), Expect = 9e-24, Method: Composition-based stats. Identities = 33/188 (17%), Positives = 69/188 (36%), Gaps = 18/188 (9%) Query: 18 ENIEAFNSASKTVKCLQLANGA-VYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYH 76 + + +F+ + ++ QLA + + + + I+ + + ++ +++ Sbjct: 812 DKLHSFSVLNGILRLRQLACHPQLIFPDFTGSSGKTAQIIETFDTL--RSEGHKVLIFSS 869 Query: 77 FNSDLARLQKAFPQ---------GRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQY 127 F L L +AF + G T D+ + + + G GLNL Sbjct: 870 FVKHLEVLAEAFQERGWKYALLTGATNDRPSEIAHFTEQKDVQAFLISLKAGGVGLNLTQ 929 Query: 128 GGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTK 187 + + WW+ Q I R + G + V Y I Q +I+E +LQ K Sbjct: 930 ADYVFI-IDPWWNPAAESQAIAR-----AHRIGQDKQVIAYRFITQGSIEEKILQLQDEK 983 Query: 188 STIQDLLL 195 + + + Sbjct: 984 RKLAETFV 991 >gi|42525525|ref|NP_970623.1| Snf2 family protein [Treponema denticola ATCC 35405] gi|41815536|gb|AAS10504.1| Snf2 family protein [Treponema denticola ATCC 35405] Length = 1194 Score = 114 bits (285), Expect = 9e-24, Method: Composition-based stats. Identities = 36/214 (16%), Positives = 73/214 (34%), Gaps = 23/214 (10%) Query: 1 MKQYHKFQRELYCDLQGENIEAFNSA---SKTVKCLQLANGAVYYDEEKHWKEVHDEKIK 57 + Y + G + A Q+ N YD+E + + K Sbjct: 968 LAIYENLVETELHKVMGAETKIERQAYVLKLLTALKQVCNHPRAYDKETPIEMKYSGKAA 1027 Query: 58 ALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQG-----------RTLDKDPCTIQEW 104 L ++ + ++ I+ + L L+ + K ++ + Sbjct: 1028 VLIELLNEIISSGEKAIIFSQYVGTLDILKNIIQKELGTEPLLLHGQMPASKRKKAVEVF 1087 Query: 105 NEGK-IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKR 163 + + G GLNL N ++ F LW++ Q +R + G + Sbjct: 1088 QTDSAYRIFLISLKAGGTGLNLT-AANRVIHFDLWYNPAVEDQATDR-----AFRIGQTK 1141 Query: 164 AVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 VFV+ LI T +E + + ++ K I + ++A Sbjct: 1142 NVFVHRLICSGTFEEKIDEMIQKKREISGMSISA 1175 >gi|291009114|ref|ZP_06567087.1| Snf2/Rad54 family helicase [Saccharopolyspora erythraea NRRL 2338] Length = 994 Score = 114 bits (285), Expect = 1e-23, Method: Composition-based stats. Identities = 36/211 (17%), Positives = 68/211 (32%), Gaps = 22/211 (10%) Query: 3 QYHKFQRELYCDLQGENIEAFNSASKTV--KCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 Y ++ + + K Q+ N + + K+ LE Sbjct: 764 LYQAVVDDMLRRIDESDGMERRGLVLATMSKLKQVCNHPAQFLGDGSPLAGRSGKLARLE 823 Query: 61 VIIEK--ANAAPIIVAYHFNSD----LARLQKAFPQ-------GRTLDKDPCTIQEWNEG 107 I+E+ A+ + F + L F G + ++ + Sbjct: 824 EILEEVLADGDKALCFTQFAGFGGMLVPHLSARFDTEVLYLHGGTPKKQRDAMVERFQSA 883 Query: 108 KIP-LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVF 166 P + + G GL L G N ++ WW+ Q +R + G +R V Sbjct: 884 DGPAVFMLSLKAGGTGLTLT-GANHVIHLDRWWNPAVEDQATDR-----AFRIGQRRDVQ 937 Query: 167 VYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 V L T++E + + L K + L++ A Sbjct: 938 VRKLTCIGTLEEKIDRMLEDKKALAQLVVGA 968 >gi|42520462|ref|NP_966377.1| SNF2 family helicase [Wolbachia endosymbiont of Drosophila melanogaster] gi|42410201|gb|AAS14311.1| helicase, SNF2 family [Wolbachia endosymbiont of Drosophila melanogaster] Length = 1175 Score = 114 bits (285), Expect = 1e-23, Method: Composition-based stats. Identities = 31/185 (16%), Positives = 70/185 (37%), Gaps = 20/185 (10%) Query: 27 SKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANA--APIIVAYHFNSDLARL 84 Q+ N + ++K K++ LE I+ ++ + + Sbjct: 974 KLINALKQICNHPSQFGKKKRASIEQSGKMQMLEEILISIGEVAEKSLIFTQYTEMGEII 1033 Query: 85 QKAFPQ-----------GRTLDKDPCTIQEWNE-GKIPLLFAHPASCGHGLNLQYGGNIL 132 + + G + I ++ + +L + G GLNL N + Sbjct: 1034 ARLLEERFESEVPFLHGGLSRKARDTMINDFQNLFQSNILIVSLKAGGTGLNLT-AANHV 1092 Query: 133 VFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQD 192 + + LWW+ Q +R + G +R V VY L++ T +E + + +++K + + Sbjct: 1093 IHYDLWWNPAVEAQATDR-----AYRIGQERNVMVYRLLSTGTFEERIDEMIQSKKELAN 1147 Query: 193 LLLNA 197 L +++ Sbjct: 1148 LTISS 1152 >gi|134098193|ref|YP_001103854.1| Snf2/Rad54 family helicase [Saccharopolyspora erythraea NRRL 2338] gi|133910816|emb|CAM00929.1| probable helicase, Snf2/Rad54 family [Saccharopolyspora erythraea NRRL 2338] Length = 988 Score = 114 bits (285), Expect = 1e-23, Method: Composition-based stats. Identities = 36/211 (17%), Positives = 68/211 (32%), Gaps = 22/211 (10%) Query: 3 QYHKFQRELYCDLQGENIEAFNSASKTV--KCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 Y ++ + + K Q+ N + + K+ LE Sbjct: 758 LYQAVVDDMLRRIDESDGMERRGLVLATMSKLKQVCNHPAQFLGDGSPLAGRSGKLARLE 817 Query: 61 VIIEK--ANAAPIIVAYHFNSD----LARLQKAFPQ-------GRTLDKDPCTIQEWNEG 107 I+E+ A+ + F + L F G + ++ + Sbjct: 818 EILEEVLADGDKALCFTQFAGFGGMLVPHLSARFDTEVLYLHGGTPKKQRDAMVERFQSA 877 Query: 108 KIP-LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVF 166 P + + G GL L G N ++ WW+ Q +R + G +R V Sbjct: 878 DGPAVFMLSLKAGGTGLTLT-GANHVIHLDRWWNPAVEDQATDR-----AFRIGQRRDVQ 931 Query: 167 VYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 V L T++E + + L K + L++ A Sbjct: 932 VRKLTCIGTLEEKIDRMLEDKKALAQLVVGA 962 >gi|225630349|ref|YP_002727140.1| helicase, SNF2 family [Wolbachia sp. wRi] gi|225630743|ref|YP_002727534.1| helicase, SNF2 family [Wolbachia sp. wRi] gi|225592330|gb|ACN95349.1| helicase, SNF2 family [Wolbachia sp. wRi] gi|225592724|gb|ACN95743.1| helicase, SNF2 family [Wolbachia sp. wRi] Length = 1175 Score = 113 bits (284), Expect = 1e-23, Method: Composition-based stats. Identities = 31/185 (16%), Positives = 70/185 (37%), Gaps = 20/185 (10%) Query: 27 SKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANA--APIIVAYHFNSDLARL 84 Q+ N + ++K K++ LE I+ ++ + + Sbjct: 974 KLINALKQICNHPSQFGKKKRASIEQSGKMQMLEEILISIGEVAEKSLIFTQYTEMGEII 1033 Query: 85 QKAFPQ-----------GRTLDKDPCTIQEWNE-GKIPLLFAHPASCGHGLNLQYGGNIL 132 + + G + I ++ + +L + G GLNL N + Sbjct: 1034 ARLLEERFESEVPFLHGGLSRKARDTMINDFQNLFQSNILIVSLKAGGTGLNLT-AANHV 1092 Query: 133 VFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQD 192 + + LWW+ Q +R + G +R V VY L++ T +E + + +++K + + Sbjct: 1093 IHYDLWWNPAVEAQATDR-----AYRIGQERNVMVYRLLSTGTFEERIDEMIQSKKELAN 1147 Query: 193 LLLNA 197 L +++ Sbjct: 1148 LTISS 1152 >gi|281211035|gb|EFA85201.1| myb domain-containing protein [Polysphondylium pallidum PN500] Length = 2415 Score = 113 bits (284), Expect = 1e-23, Method: Composition-based stats. Identities = 38/167 (22%), Positives = 69/167 (41%), Gaps = 19/167 (11%) Query: 44 EEKHWKEVHDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQ---------KAFPQGR 92 +K + K++AL ++ K N ++ + L + G Sbjct: 1252 PDKKLIQYDCGKLQALAKLLRNLKTNGHRALIFTQWTRMLDVFESFLNLHGYTYLRLDGS 1311 Query: 93 TL-DKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 T D+ + +N + KI L S G GLNL G + ++F+ W+ Q +R Sbjct: 1312 TKVDRRQYLAERFNRDNKIFLFILSTRSGGLGLNLT-GADTVIFYDTDWNPSMDAQAQDR 1370 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + G R V +Y LI Q+TI+E +L++ K + D+++ Sbjct: 1371 C-----HRIGQTREVNIYRLITQHTIEENILRKSNQKRQLDDVVIQG 1412 >gi|325475354|gb|EGC78539.1| Snf2 family protein [Treponema denticola F0402] Length = 1216 Score = 113 bits (284), Expect = 1e-23, Method: Composition-based stats. Identities = 36/214 (16%), Positives = 73/214 (34%), Gaps = 23/214 (10%) Query: 1 MKQYHKFQRELYCDLQGENIEAFNSA---SKTVKCLQLANGAVYYDEEKHWKEVHDEKIK 57 + Y + G + A Q+ N YD+E + + K Sbjct: 990 LAIYENLVETELHKVMGAETKIERQAYVLKLLTALKQVCNHPRAYDKETPVEMKYSGKAA 1049 Query: 58 ALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQG-----------RTLDKDPCTIQEW 104 L ++ + ++ I+ + L L+ + K + + Sbjct: 1050 LLIELLNEIISSGEKAIIFSQYVGTLDILKNIIQKELGTEPLLLHGQMPASKRKKAVDVF 1109 Query: 105 N-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKR 163 + + + G GLNL N ++ F LW++ Q +R + G + Sbjct: 1110 QTDPAYRIFLISLKAGGTGLNLT-AANRVIHFDLWYNPAVEDQATDR-----AFRIGQTK 1163 Query: 164 AVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 VFV+ LI T +E + + ++ K I + ++A Sbjct: 1164 NVFVHRLICSGTFEEKIDEMIQKKREISGMSISA 1197 >gi|251797236|ref|YP_003011967.1| SNF2-related protein [Paenibacillus sp. JDR-2] gi|247544862|gb|ACT01881.1| SNF2-related protein [Paenibacillus sp. JDR-2] Length = 1026 Score = 113 bits (284), Expect = 1e-23, Method: Composition-based stats. Identities = 41/232 (17%), Positives = 82/232 (35%), Gaps = 43/232 (18%) Query: 2 KQYHKFQRELYCD---LQGENIEAFNSASKTVKCLQLANGAVY---------YDEEKHWK 49 Y + +EL + L+G + S + QL N V DE + Sbjct: 777 ALYEQTVKELMDEVKKLEGIQRKGA-ILSALTRLKQLCNHPVLLTKEVVPVPEDEREEAA 835 Query: 50 EVH-----DEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQKAFPQ-----------G 91 E K++ L ++++ ++ + LQ+ + G Sbjct: 836 ESAMLISRSAKLERLLDLVKELREEGERCLIFTQYIGMGEMLQRVLGRELGEPVLYLHGG 895 Query: 92 RTLDKDPCTIQEWNEGKIP------LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQ 145 + I+++ ++P + + G GLNL N + F WW+ Sbjct: 896 SSKTARDRMIEQFQSRELPPAEQPNVFILSIKAGGVGLNLT-AANHVFHFDRWWNPAVEN 954 Query: 146 QMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 Q +R + G R V V+ I+ T++E + + L +K + D ++ + Sbjct: 955 QATDR-----AYRMGQTRDVQVHKFISLGTLEERIDEMLESKQQLSDDVITS 1001 >gi|296119487|ref|ZP_06838045.1| putative DNA/RNA helicase [Corynebacterium ammoniagenes DSM 20306] gi|295967370|gb|EFG80637.1| putative DNA/RNA helicase [Corynebacterium ammoniagenes DSM 20306] Length = 1036 Score = 113 bits (284), Expect = 1e-23, Method: Composition-based stats. Identities = 36/215 (16%), Positives = 74/215 (34%), Gaps = 27/215 (12%) Query: 2 KQYHKFQRELYCDLQ-GENIEAFNSASKT--VKCLQLANG-AVYYDEEKHWKEVHDE--- 54 Y ++ ++ A + + Q+ N A Y + Sbjct: 802 ALYKALVDDIQLRMETAPKGMALRGLVLSSLTRIKQICNHPAHYLGDGSPVTSKGKHRSG 861 Query: 55 KIKALEVIIEKA--NAAPIIVAYHFNSDLARLQKAFP-----------QGRTLDKDPCTI 101 K++ L I++ A + +++ + + LQ G T ++ + Sbjct: 862 KVEKLMEILDSAVTHDERVLIFTQYKAFGDILQPYLSAQLGAKIPFLHGGVTKNRRDDMV 921 Query: 102 QEWNEGK-IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 ++ P + + G GLNL NI+V WW+ Q +R + G Sbjct: 922 TDFQAADGPPAMILSLKAGGTGLNLT-AANIVVHMDRWWNPAVENQATDR-----AFRIG 975 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 + V VY +I T++E + L K+ + ++ Sbjct: 976 QSKNVQVYKMITAGTLEESIQDILDGKTQLAGAVV 1010 >gi|225441914|ref|XP_002278785.1| PREDICTED: hypothetical protein [Vitis vinifera] Length = 1563 Score = 113 bits (284), Expect = 1e-23, Method: Composition-based stats. Identities = 31/160 (19%), Positives = 67/160 (41%), Gaps = 19/160 (11%) Query: 51 VHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAF----------PQGRTLDKDP 98 K++ L++++++ A +++ L L+ T+ Sbjct: 1210 TDSGKLQTLDILLKRLRAENHRVLLFAQMTKMLNILEDYMNYRKYRYLRLDGSSTIMDRR 1269 Query: 99 CTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 ++++ I + + G G+NL + ++F+ W+ Q ++R Sbjct: 1270 DMVRDFQLRSDIFVFLLSTRAGGLGINLT-AADTVIFYESDWNPTLDLQAMDR-----AH 1323 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + G + V VY LI + T++E +LQR KST+Q L++ Sbjct: 1324 RLGQTKDVTVYRLICKETVEEKILQRASQKSTVQQLVMTG 1363 >gi|115910510|ref|XP_795650.2| PREDICTED: similar to SD02886p [Strongylocentrotus purpuratus] gi|115960830|ref|XP_001193156.1| PREDICTED: similar to SD02886p [Strongylocentrotus purpuratus] Length = 1571 Score = 113 bits (284), Expect = 1e-23, Method: Composition-based stats. Identities = 28/160 (17%), Positives = 61/160 (38%), Gaps = 19/160 (11%) Query: 44 EEKHWKEVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQK----------AFPQG 91 +K + K+ L+ ++ + +++ + L++ Sbjct: 1164 PDKDYLVTDSGKMHVLDDLLSQLKDQGHRVLIYSQMTRMIDILEEFLWHRKHTYMRLDGS 1223 Query: 92 RTLDKDPCTIQEWNEG-KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 + + + I + + G G+NL + ++F+ W+ QQ ++R Sbjct: 1224 SKISDRRDMVAGFQSRTDIFVFLLSTRAGGLGINLT-AADTVIFYDSDWNPTVDQQAMDR 1282 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 + G + V VY LI + TI+E +L+R R KS + Sbjct: 1283 -----AHRLGQTKQVTVYRLICKGTIEEHILERAREKSEV 1317 >gi|255586403|ref|XP_002533848.1| ATP binding protein, putative [Ricinus communis] gi|223526215|gb|EEF28539.1| ATP binding protein, putative [Ricinus communis] Length = 1339 Score = 113 bits (284), Expect = 1e-23, Method: Composition-based stats. Identities = 30/160 (18%), Positives = 67/160 (41%), Gaps = 19/160 (11%) Query: 51 VHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAF----------PQGRTLDKDP 98 K++ L++++++ A +++ L L+ T+ Sbjct: 1143 TDSGKLQTLDILLKRLRAENHRVLLFAQMTKMLNILEDYMNYRKYRYLRLDGSSTIMDRR 1202 Query: 99 CTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 ++++ I + + G G+NL + ++F+ W+ Q ++R Sbjct: 1203 DMVRDFQHRSDIFVFLLSTRAGGLGINLT-AADTVIFYESDWNPTLDLQAMDR-----AH 1256 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + G + V VY LI + T++E +LQR K+T+Q L++ Sbjct: 1257 RLGQTKDVTVYRLICKETVEEKILQRASQKNTVQQLVMTG 1296 >gi|260906271|ref|ZP_05914593.1| putative helicase [Brevibacterium linens BL2] Length = 1041 Score = 113 bits (284), Expect = 1e-23, Method: Composition-based stats. Identities = 33/184 (17%), Positives = 62/184 (33%), Gaps = 20/184 (10%) Query: 26 ASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLAR 83 + K Q+ N + + K++ E I+ + A ++ F Sbjct: 836 LAAMTKLKQVCNHPAHLLHDGSAIGQRSGKLERFEEIMSETLAEGDRVLCFTQFTDFGEM 895 Query: 84 LQ-----------KAFPQGRTLDKDPCTIQEWNEGKIP-LLFAHPASCGHGLNLQYGGNI 131 L + + ++++ E P + + G GLNL N Sbjct: 896 LVPHLAAKFDTDVAYLAGSTSKQRRTQIVKDFQEPDGPKIFVLSLKAGGTGLNLT-AANQ 954 Query: 132 LVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQ 191 +V WW+ Q +R + G KR V V I T++E + L K + Sbjct: 955 VVHLDRWWNPAVENQATDR-----AFRIGQKRRVQVRKFIGIGTLEERIDAILEEKKELA 1009 Query: 192 DLLL 195 D+++ Sbjct: 1010 DMVV 1013 >gi|309790429|ref|ZP_07684991.1| SNF2-related helicase [Oscillochloris trichoides DG6] gi|308227542|gb|EFO81208.1| SNF2-related helicase [Oscillochloris trichoides DG6] Length = 1032 Score = 113 bits (284), Expect = 1e-23, Method: Composition-based stats. Identities = 36/218 (16%), Positives = 74/218 (33%), Gaps = 26/218 (11%) Query: 3 QYHKFQRELYCDLQGENIEAFNS------ASKTVKCLQLANGAVYYDEEKHWKEVHDEKI 56 Y RE ++ E + + K Q+ N ++ ++ K+ Sbjct: 800 LYEATVREALSEIADAESEEEQTRRRGLVLAMLTKLKQICNHPAHFLKDGSQLAERSGKL 859 Query: 57 KALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQ-----------GRTLDKDPCTIQE 103 L+ ++E+ A ++ F LQ Q G ++ Sbjct: 860 ARLDEMLEEVVAAEDRALIFTQFAEMGTLLQAHLSQRLGQEILFLHGGTPTRSRDGMVRR 919 Query: 104 WNEGK-IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFK 162 + + P+ + G GLNL + + F WW+ Q +R + G Sbjct: 920 FQAPEGPPIFILSLKAGGVGLNLTRASH-VFHFDRWWNPAVEDQATDR-----SFRIGQT 973 Query: 163 RAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKK 200 R V V+ ++ T++E + + + K + +L A + Sbjct: 974 RNVQVHKFVSSGTLEEKIDEMIEGKRALAAQVLGAGEA 1011 >gi|260495666|ref|ZP_05815790.1| SWF/SNF family helicase [Fusobacterium sp. 3_1_33] gi|260196849|gb|EEW94372.1| SWF/SNF family helicase [Fusobacterium sp. 3_1_33] Length = 899 Score = 113 bits (284), Expect = 1e-23, Method: Composition-based stats. Identities = 40/210 (19%), Positives = 84/210 (40%), Gaps = 25/210 (11%) Query: 2 KQYHKFQRELYCDLQGENIEAFN-----SASKTVKCLQLANGAVYYDEEKHWKEVHDEKI 56 + Y + ++ Y L+ N + + + E + K + +K Sbjct: 680 RFYEERRKYYYSLLEKNTSSQGNFDKFFVLQAINELRHIVSSP----ELESKKIISSKKE 735 Query: 57 KALEVIIEK-ANAAPIIVAYHFNSDLARLQKAFPQ---------GRTLDKDPCTIQEWNE 106 +E +IE N ++V ++ S + + + + G+T D+ + N+ Sbjct: 736 VLIENVIEAIENNHKVLVFVNYLSSIESICDSLKENKIKYLKMTGQTKDRQNLVDKFQND 795 Query: 107 GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVF 166 + + + G GLNL + + + WW+ Q I+R + G + VF Sbjct: 796 SRYKVFVMTLKTGGVGLNL-VSADTIFIYDPWWNTTVENQAIDR-----AYRLGQDKTVF 849 Query: 167 VYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 Y +I +NTI+E +L+ K+ + D L++ Sbjct: 850 AYKMIMRNTIEEKILKLQEIKNKLLDDLIS 879 >gi|28950292|emb|CAD70746.1| related to DNA-dependent ATPase DOMINO B [Neurospora crassa] Length = 1955 Score = 113 bits (284), Expect = 1e-23, Method: Composition-based stats. Identities = 27/159 (16%), Positives = 62/159 (38%), Gaps = 19/159 (11%) Query: 50 EVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQKAF---------PQGRTL--DK 96 K+ L+ ++ + N +++ + + +++ G T D+ Sbjct: 1648 VTDSGKLAKLDELLRELKENGHRVLLYFQMTRMIDLMEEYLTYRNYKYCRLDGSTKLEDR 1707 Query: 97 DPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 +I + + G G+NL + ++F+ W+ Q ++R Sbjct: 1708 RDTVADFQTRPEIFIFLLSTRAGGLGINLT-SADTVIFYDSDWNPTIDSQAMDR-----A 1761 Query: 157 RQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 + G + V VY LI + TI+E + +R K +Q +++ Sbjct: 1762 HRLGQTKQVTVYRLITRGTIEERIRKRAMQKEEVQRVVI 1800 >gi|237745383|ref|ZP_04575864.1| SWF/SNF family helicase [Fusobacterium sp. 7_1] gi|229432612|gb|EEO42824.1| SWF/SNF family helicase [Fusobacterium sp. 7_1] Length = 899 Score = 113 bits (284), Expect = 1e-23, Method: Composition-based stats. Identities = 40/210 (19%), Positives = 84/210 (40%), Gaps = 25/210 (11%) Query: 2 KQYHKFQRELYCDLQGENIEAFN-----SASKTVKCLQLANGAVYYDEEKHWKEVHDEKI 56 + Y + ++ Y L+ N + + + E + K + +K Sbjct: 680 RFYEERRKYYYSLLEKNTSSQGNFDKFFVLQAINELRHIVSSP----ELESKKIISSKKE 735 Query: 57 KALEVIIEK-ANAAPIIVAYHFNSDLARLQKAFPQ---------GRTLDKDPCTIQEWNE 106 +E +IE N ++V ++ S + + + + G+T D+ + N+ Sbjct: 736 VLIENVIEAIENNHKVLVFVNYLSSIESICDSLKENKIKYLKMTGQTKDRQNLVDKFQND 795 Query: 107 GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVF 166 + + + G GLNL + + + WW+ Q I+R + G + VF Sbjct: 796 SRYKVFVMTLKTGGVGLNL-VSADTIFIYDPWWNTTVENQAIDR-----AYRLGQDKTVF 849 Query: 167 VYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 Y +I +NTI+E +L+ K+ + D L++ Sbjct: 850 AYKMIMRNTIEEKILKLQEIKNKLLDDLIS 879 >gi|168016565|ref|XP_001760819.1| SNF2 family DNA-dependent ATPase [Physcomitrella patens subsp. patens] gi|162687828|gb|EDQ74208.1| SNF2 family DNA-dependent ATPase [Physcomitrella patens subsp. patens] Length = 1644 Score = 113 bits (284), Expect = 1e-23, Method: Composition-based stats. Identities = 28/160 (17%), Positives = 65/160 (40%), Gaps = 19/160 (11%) Query: 51 VHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAF----------PQGRTLDKDP 98 K++ L++++++ A +++ L L+ T+ Sbjct: 1222 TDSGKLQTLDILLKRLRAGNHRVLLFAQMTKMLNILEDYMNYRKYKYLRLDGSSTIMDRR 1281 Query: 99 CTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 + ++ I + + G G+NL + ++F+ W+ Q ++R Sbjct: 1282 DMVNDFQHRSDIFVFLLSTRAGGLGINLT-AADTVIFYESDWNPTMDLQAMDR-----AH 1335 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + G + V VY LI T++E +++R K+T+Q L++ Sbjct: 1336 RLGQTKEVTVYRLICTGTVEEKIMKRASQKNTVQQLVMTG 1375 >gi|19704721|ref|NP_604283.1| SWF/SNF family helicase [Fusobacterium nucleatum subsp. nucleatum ATCC 25586] gi|19715039|gb|AAL95582.1| SWF/SNF family helicase [Fusobacterium nucleatum subsp. nucleatum ATCC 25586] Length = 892 Score = 113 bits (284), Expect = 1e-23, Method: Composition-based stats. Identities = 40/210 (19%), Positives = 84/210 (40%), Gaps = 25/210 (11%) Query: 2 KQYHKFQRELYCDLQGENIEAFN-----SASKTVKCLQLANGAVYYDEEKHWKEVHDEKI 56 + Y + ++ Y L+ N + + + E + K + +K Sbjct: 673 RFYEERRKYYYSLLEKNTSSQGNFDKFFVLQAINELRHIVSSP----ELESKKIISSKKE 728 Query: 57 KALEVIIEK-ANAAPIIVAYHFNSDLARLQKAFPQ---------GRTLDKDPCTIQEWNE 106 +E +IE N ++V ++ S + + + + G+T D+ + N+ Sbjct: 729 VLIENVIEAIENNHKVLVFVNYLSSIESICDSLKENKIKYLKMTGQTKDRQNLVDKFQND 788 Query: 107 GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVF 166 + + + G GLNL + + + WW+ Q I+R + G + VF Sbjct: 789 SRYKVFVMTLKTGGVGLNL-VSADTIFIYDPWWNTTVENQAIDR-----AYRLGQDKTVF 842 Query: 167 VYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 Y +I +NTI+E +L+ K+ + D L++ Sbjct: 843 AYKMIMRNTIEEKILKLQEIKNKLLDDLIS 872 >gi|302510487|ref|XP_003017195.1| hypothetical protein ARB_04072 [Arthroderma benhamiae CBS 112371] gi|291180766|gb|EFE36550.1| hypothetical protein ARB_04072 [Arthroderma benhamiae CBS 112371] Length = 1541 Score = 113 bits (284), Expect = 1e-23, Method: Composition-based stats. Identities = 27/161 (16%), Positives = 63/161 (39%), Gaps = 19/161 (11%) Query: 50 EVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQKAF---------PQGRTL--DK 96 K+ L+ ++ + +++ + + +++ G T D+ Sbjct: 1252 VTDSGKLAKLDELLRELKNGGHRVLLYFQMTRMIDLMEEYLTYRNYKYCRLDGSTKLEDR 1311 Query: 97 DPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 + +I + + G G+NL + ++F+ W+ Q ++R Sbjct: 1312 RDTVLDFQQRPEIFIFLLSTRAGGLGINLT-AADTVIFYDSDWNPTIDSQAMDR-----A 1365 Query: 157 RQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + G R V VY LI + TI+E + +R K +Q ++++ Sbjct: 1366 HRLGQTRQVTVYRLITRGTIEERIRKRALQKEEVQRVVISG 1406 >gi|164423223|ref|XP_958688.2| hypothetical protein NCU08919 [Neurospora crassa OR74A] gi|157069998|gb|EAA29452.2| hypothetical protein NCU08919 [Neurospora crassa OR74A] Length = 1942 Score = 113 bits (284), Expect = 1e-23, Method: Composition-based stats. Identities = 27/159 (16%), Positives = 62/159 (38%), Gaps = 19/159 (11%) Query: 50 EVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQKAF---------PQGRTL--DK 96 K+ L+ ++ + N +++ + + +++ G T D+ Sbjct: 1639 VTDSGKLAKLDELLRELKENGHRVLLYFQMTRMIDLMEEYLTYRNYKYCRLDGSTKLEDR 1698 Query: 97 DPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 +I + + G G+NL + ++F+ W+ Q ++R Sbjct: 1699 RDTVADFQTRPEIFIFLLSTRAGGLGINLT-SADTVIFYDSDWNPTIDSQAMDR-----A 1752 Query: 157 RQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 + G + V VY LI + TI+E + +R K +Q +++ Sbjct: 1753 HRLGQTKQVTVYRLITRGTIEERIRKRAMQKEEVQRVVI 1791 >gi|322701898|gb|EFY93646.1| recombinational repair protein [Metarhizium acridum CQMa 102] Length = 819 Score = 113 bits (283), Expect = 1e-23, Method: Composition-based stats. Identities = 38/159 (23%), Positives = 67/159 (42%), Gaps = 19/159 (11%) Query: 58 ALEVIIEKANAAPIIVAYHFNSDL---ARLQKAFPQGRTL-------DKDPCTIQEWN-- 105 L I + N +++ ++ S L RL ++ G +K + +N Sbjct: 526 MLARIRQDTNDKIVLI-SNYTSTLDLFERLCRSRQYGCLRLDGTMNVNKRQKLVDRFNDP 584 Query: 106 EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 G+ + + G G+NL G N LV F W+ QQ + R+ + G K+ Sbjct: 585 NGEEFVFLLSSKAGGCGINL-IGANRLVLFDPDWNPAADQQALARVW-----RDGQKKDC 638 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIH 204 FVY IA TI+E + QR K ++ ++++ + H Sbjct: 639 FVYRFIATGTIEEKIFQRQSHKQSLSSCVVDSAEDVERH 677 >gi|310795007|gb|EFQ30468.1| SNF2 family domain-containing protein [Glomerella graminicola M1.001] Length = 852 Score = 113 bits (283), Expect = 1e-23, Method: Composition-based stats. Identities = 38/175 (21%), Positives = 73/175 (41%), Gaps = 21/175 (12%) Query: 45 EKHWKEVHDEKIKALEVI---IEKANAAPIIVAYHFNSDLARLQK----------AFPQG 91 ++ K + K++ L+ + I + I++ ++ L +K Sbjct: 600 DRDIKPWYSGKMQVLDRMLARIRQDTNDKIVLISNYTQTLDLFEKLCRSRAYGCLRLDGT 659 Query: 92 RTLDKDPCTIQEWNE--GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIE 149 ++K + ++N G+ + + G GLNL G N LV F W+ QQ + Sbjct: 660 MNVNKRQKLVDKFNNPDGEEFVFLLSSKAGGCGLNL-IGANRLVLFDPDWNPAADQQALA 718 Query: 150 RIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIH 204 R+ + G K+ FVY IA TI+E + QR K ++ ++++ + H Sbjct: 719 RVW-----RDGQKKDCFVYRFIATGTIEEKIFQRQSHKQSLSSCVVDSAEDVERH 768 >gi|297739617|emb|CBI29799.3| unnamed protein product [Vitis vinifera] Length = 1557 Score = 113 bits (283), Expect = 1e-23, Method: Composition-based stats. Identities = 31/160 (19%), Positives = 67/160 (41%), Gaps = 19/160 (11%) Query: 51 VHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAF----------PQGRTLDKDP 98 K++ L++++++ A +++ L L+ T+ Sbjct: 1210 TDSGKLQTLDILLKRLRAENHRVLLFAQMTKMLNILEDYMNYRKYRYLRLDGSSTIMDRR 1269 Query: 99 CTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 ++++ I + + G G+NL + ++F+ W+ Q ++R Sbjct: 1270 DMVRDFQLRSDIFVFLLSTRAGGLGINLT-AADTVIFYESDWNPTLDLQAMDR-----AH 1323 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + G + V VY LI + T++E +LQR KST+Q L++ Sbjct: 1324 RLGQTKDVTVYRLICKETVEEKILQRASQKSTVQQLVMTG 1363 >gi|37521835|ref|NP_925212.1| helicase [Gloeobacter violaceus PCC 7421] gi|35212834|dbj|BAC90207.1| glr2266 [Gloeobacter violaceus PCC 7421] Length = 1008 Score = 113 bits (283), Expect = 1e-23, Method: Composition-based stats. Identities = 35/213 (16%), Positives = 74/213 (34%), Gaps = 23/213 (10%) Query: 2 KQYHKFQRELYCDLQGEN--IEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKAL 59 Y + E ++ + VK Q+ N +Y + K+ L Sbjct: 771 ALYERVVNESLAKIEQSTGIQRRGTVLATLVKLKQICNHPSHYLGDDGPLANRSGKLSRL 830 Query: 60 EVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQ-----------GRTLDKDPCTIQEWNE 106 ++E+ A+ ++ F LQ + G + ++ I+ + Sbjct: 831 GEMLEEVLADEERALIFTQFAEWGHLLQAHLSRQLGSEVFFLYGGTSKNQREAMIERFQS 890 Query: 107 GKI--PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA 164 + + G GLNL N + F WW+ Q +R+ + G + Sbjct: 891 DPQGPRIFILSLKAGGVGLNLTR-ANHVFHFDRWWNPAVENQATDRVF-----RIGQTKN 944 Query: 165 VFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 V VY + T++E + + +K + + +++A Sbjct: 945 VQVYKYVCTGTLEERINALIESKKALAEQVVSA 977 >gi|67523659|ref|XP_659889.1| hypothetical protein AN2285.2 [Aspergillus nidulans FGSC A4] gi|74681303|sp|Q5BAZ5|INO80_EMENI RecName: Full=Putative DNA helicase ino80 gi|40745240|gb|EAA64396.1| hypothetical protein AN2285.2 [Aspergillus nidulans FGSC A4] gi|259487678|tpe|CBF86533.1| TPA: Putative DNA helicase ino80 (EC 3.6.1.-) [Source:UniProtKB/Swiss-Prot;Acc:Q5BAZ5] [Aspergillus nidulans FGSC A4] Length = 1612 Score = 113 bits (283), Expect = 1e-23, Method: Composition-based stats. Identities = 28/161 (17%), Positives = 63/161 (39%), Gaps = 19/161 (11%) Query: 50 EVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAF---------PQGRTL--DK 96 K+ L+ ++ + A +++ + + +++ G T D+ Sbjct: 1317 VTDSGKLAKLDELLRELKAGGHRVLLYFQMTRMIDLMEEYLTYRNYKYCRLDGSTKLEDR 1376 Query: 97 DPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 I + + G G+NL + ++F+ W+ Q ++R Sbjct: 1377 RDTVADFQQRPDIFVFLLSTRAGGLGINLT-AADTVIFYDSDWNPTIDSQAMDR-----A 1430 Query: 157 RQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + G R V VY LI ++TI+E + +R K +Q ++++ Sbjct: 1431 HRLGQTRQVTVYRLITRSTIEERIRKRALQKEEVQRVVISG 1471 >gi|296327606|ref|ZP_06870151.1| SWF/SNF family helicase [Fusobacterium nucleatum subsp. nucleatum ATCC 23726] gi|296155280|gb|EFG96052.1| SWF/SNF family helicase [Fusobacterium nucleatum subsp. nucleatum ATCC 23726] Length = 899 Score = 113 bits (283), Expect = 1e-23, Method: Composition-based stats. Identities = 40/210 (19%), Positives = 84/210 (40%), Gaps = 25/210 (11%) Query: 2 KQYHKFQRELYCDLQGENIEAFN-----SASKTVKCLQLANGAVYYDEEKHWKEVHDEKI 56 + Y + ++ Y L+ N + + + E + K + +K Sbjct: 680 RFYEERRKYYYSLLEKNTSSQGNFDKFFVLQAINELRHIVSSP----ELESKKIISSKKE 735 Query: 57 KALEVIIEK-ANAAPIIVAYHFNSDLARLQKAFPQ---------GRTLDKDPCTIQEWNE 106 +E +IE N ++V ++ S + + + + G+T D+ + N+ Sbjct: 736 VLIENVIEAIENNHKVLVFVNYLSSIESICDSLKENKIKYLKMTGQTKDRQNLVDKFQND 795 Query: 107 GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVF 166 + + + G GLNL + + + WW+ Q I+R + G + VF Sbjct: 796 SRYKVFVMTLKTGGVGLNL-VSADTIFIYDPWWNTTVENQAIDR-----AYRLGQDKTVF 849 Query: 167 VYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 Y +I +NTI+E +L+ K+ + D L++ Sbjct: 850 AYKMIMRNTIEEKILKLQEIKNKLLDDLIS 879 >gi|71019185|ref|XP_759823.1| hypothetical protein UM03676.1 [Ustilago maydis 521] gi|46099621|gb|EAK84854.1| hypothetical protein UM03676.1 [Ustilago maydis 521] Length = 1060 Score = 113 bits (283), Expect = 1e-23, Method: Composition-based stats. Identities = 42/164 (25%), Positives = 70/164 (42%), Gaps = 22/164 (13%) Query: 55 KIKALEVIIE---KANAAPIIVAYHFNSDLARL-----QKAFPQGRTLDKDPCT-----I 101 K+ + +++ +++ +F S L + +K +P R K P + Sbjct: 683 KLICVMNLLQTVRAQTDDKVVLVSNFTSTLDIIEAMMRKKRYPYLRLDGKTPQDERMAMV 742 Query: 102 QEWNE---GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQ 158 ++N K + S G GLNL G N LV W+ Q + RI + Sbjct: 743 NQFNREGVDKSFVFLLSAKSGGVGLNL-IGANRLVLIDSDWNPSTDLQAMARI-----HR 796 Query: 159 AGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKET 202 G K+ ++Y L+ T+DE + QR +K + D L+NA KK T Sbjct: 797 DGQKKPCYIYRLLLSGTMDEKIYQRQISKLGLSDSLMNAEKKTT 840 >gi|327300603|ref|XP_003234994.1| SNF2 family helicase/ATPase [Trichophyton rubrum CBS 118892] gi|326462346|gb|EGD87799.1| SNF2 family helicase/ATPase [Trichophyton rubrum CBS 118892] Length = 1691 Score = 113 bits (283), Expect = 1e-23, Method: Composition-based stats. Identities = 27/161 (16%), Positives = 63/161 (39%), Gaps = 19/161 (11%) Query: 50 EVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQKAF---------PQGRTL--DK 96 K+ L+ ++ + +++ + + +++ G T D+ Sbjct: 1402 VTDSGKLAKLDELLRELKNGGHRVLLYFQMTRMIDLMEEYLTYRNYKYCRLDGSTKLEDR 1461 Query: 97 DPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 + +I + + G G+NL + ++F+ W+ Q ++R Sbjct: 1462 RDTVLDFQQRPEIFIFLLSTRAGGLGINLT-AADTVIFYDSDWNPTIDSQAMDR-----A 1515 Query: 157 RQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + G R V VY LI + TI+E + +R K +Q ++++ Sbjct: 1516 HRLGQTRQVTVYRLITRRTIEERIRKRALQKEEVQRVVISG 1556 >gi|153870520|ref|ZP_01999904.1| SNF2 family protein [Beggiatoa sp. PS] gi|152073016|gb|EDN70098.1| SNF2 family protein [Beggiatoa sp. PS] Length = 1036 Score = 113 bits (283), Expect = 1e-23, Method: Composition-based stats. Identities = 37/211 (17%), Positives = 74/211 (35%), Gaps = 24/211 (11%) Query: 3 QYHKFQRELYCDLQGENIEAFNSASKT--VKCLQLANGA-VYYDEEKHWKEVHDEKIKAL 59 Y +E+ L+ + +K Q+ N + + + + K++ L Sbjct: 804 LYEAVVKEVAAQLEEAEGIQRKGLMLSTLMKLKQICNHPRQFLQDSSIFSKERSHKLERL 863 Query: 60 EVIIEK--ANAAPIIVAYHFNSDLARLQKAFP-----------QGRTLDKDPCTIQEWNE 106 ++E+ A ++ F L K G T +K I E+ E Sbjct: 864 TEMLEEVIAEQESALIFTQFTEIGENLNKYLKHNLNYNSYYLHGGTTRNKREQMITEFQE 923 Query: 107 GKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA 164 P + + G G+ L N + F WW+ Q +R + G + Sbjct: 924 SDTPPSVFVLSLKAGGVGITLTK-ANHVFHFDRWWNPAVEDQATDR-----AFRIGQHKN 977 Query: 165 VFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 VFV+ ++ T++E + + + K I ++ Sbjct: 978 VFVHKFVSLGTLEERIDEMIEDKKKIARSIV 1008 >gi|226305488|ref|YP_002765448.1| helicase [Rhodococcus erythropolis PR4] gi|226184605|dbj|BAH32709.1| putative helicase [Rhodococcus erythropolis PR4] Length = 609 Score = 113 bits (283), Expect = 1e-23, Method: Composition-based stats. Identities = 30/187 (16%), Positives = 61/187 (32%), Gaps = 22/187 (11%) Query: 24 NSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDL 81 N + Q+ N + K+ +I + + ++ + + Sbjct: 401 NILALLTTLKQVCNHPAQVTGDTDDLYGRSGKLDRATEMIAEIVDDGDRALIFTQYRTMG 460 Query: 82 ARLQKAFP------------QGRTLDKDPCTIQEWNEG--KIPLLFAHPASCGHGLNLQY 127 L + G DK + + P+L + G GLNL Sbjct: 461 EMLSRHLGSELGIGAIPFLHGGLNTDKRDAMVDAFQNDTDSPPVLILSLRAAGFGLNLTR 520 Query: 128 GGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTK 187 + +V + WW+ Q +R + G KR V V+ L+ T+++ + +K Sbjct: 521 ASH-VVHYDRWWNPAVEDQATDR-----AHRIGQKRTVNVHTLVTGGTVEDHIAAMHESK 574 Query: 188 STIQDLL 194 + D + Sbjct: 575 RAVADAV 581 >gi|330944191|ref|XP_003306326.1| hypothetical protein PTT_19456 [Pyrenophora teres f. teres 0-1] gi|311316176|gb|EFQ85559.1| hypothetical protein PTT_19456 [Pyrenophora teres f. teres 0-1] Length = 1892 Score = 113 bits (283), Expect = 1e-23, Method: Composition-based stats. Identities = 36/200 (18%), Positives = 82/200 (41%), Gaps = 25/200 (12%) Query: 15 LQGENIEAFNSASKTVKCLQLANG---AVYYDEEKHWKEVHDE-KIKALEVIIEK--ANA 68 L+ + A + + K Q N + + + V D K+ L+ ++++ AN Sbjct: 1264 LEAKTESA--ALTVCNKLPQPTNERTRFTHIEAPSMSRFVTDSGKLAQLDALLKELKAND 1321 Query: 69 APIIVAYHFNSDLARLQKAF---------PQGRTLDKDPCT-IQEWNEGK-IPLLFAHPA 117 +++ + + +++ G T +D + ++ + I + Sbjct: 1322 HRVLLYFQMTRMMDLMEEYLTYRNYKYCRLDGSTKLEDRRDTVADFQSDRSIFVFLLSTR 1381 Query: 118 SCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 + G G+NL + ++F+ W+ Q ++R + G R V VY LI + TI+ Sbjct: 1382 AGGLGINLT-SADTVIFYDSDWNPTIDSQAMDR-----AHRLGQTRQVTVYRLITRGTIE 1435 Query: 178 ELVLQRLRTKSTIQDLLLNA 197 E + +R K +Q ++++ Sbjct: 1436 ERIRKRALQKEEVQRVVISG 1455 >gi|254425442|ref|ZP_05039160.1| SNF2 family N-terminal domain protein [Synechococcus sp. PCC 7335] gi|196192931|gb|EDX87895.1| SNF2 family N-terminal domain protein [Synechococcus sp. PCC 7335] Length = 1081 Score = 113 bits (283), Expect = 2e-23, Method: Composition-based stats. Identities = 37/218 (16%), Positives = 77/218 (35%), Gaps = 32/218 (14%) Query: 2 KQYHKFQRELYCDLQGENIEAFN----SASKTVKCLQLANG---AVYYDEEKHWKEVHDE 54 + Y K ++ + VK Q+ N + D + Sbjct: 846 RLYQKLVDSTLGEI--DEATGLQRRGMILGLLVKLKQICNHPAQFLQQDSLGKSRR--SG 901 Query: 55 KIKALEVIIEK--ANAAPIIVAYHF--------NSDLARL--QKAFPQGRT-LDKDPCTI 101 K++ L+ ++E+ A ++ F + RL + F G T +K + Sbjct: 902 KLQRLDEMLEEVVAEGDRALIFTQFAEWGKLLSSHLEHRLGTESLFLYGSTSKNKREEMV 961 Query: 102 QEWN-EGKIP-LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQA 159 + + P + + G GLNL N + F WW+ Q +R + Sbjct: 962 DRFQLDPNGPKIFILSLKAGGVGLNLTR-ANHVFHFDRWWNPAVENQATDR-----AFRI 1015 Query: 160 GFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 G + V V+ + T++E + + + +K + + ++ A Sbjct: 1016 GQTKNVQVHKFVCTGTLEERINEMINSKKALAEQVVGA 1053 >gi|161784309|sp|Q872I5|INO80_NEUCR RecName: Full=Putative DNA helicase ino-80 Length = 1997 Score = 113 bits (283), Expect = 2e-23, Method: Composition-based stats. Identities = 27/159 (16%), Positives = 62/159 (38%), Gaps = 19/159 (11%) Query: 50 EVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQKAF---------PQGRTL--DK 96 K+ L+ ++ + N +++ + + +++ G T D+ Sbjct: 1694 VTDSGKLAKLDELLRELKENGHRVLLYFQMTRMIDLMEEYLTYRNYKYCRLDGSTKLEDR 1753 Query: 97 DPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 +I + + G G+NL + ++F+ W+ Q ++R Sbjct: 1754 RDTVADFQTRPEIFIFLLSTRAGGLGINLT-SADTVIFYDSDWNPTIDSQAMDR-----A 1807 Query: 157 RQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 + G + V VY LI + TI+E + +R K +Q +++ Sbjct: 1808 HRLGQTKQVTVYRLITRGTIEERIRKRAMQKEEVQRVVI 1846 >gi|320587436|gb|EFW99916.1| DNA repair and recombination protein rad54 [Grosmannia clavigera kw1407] Length = 809 Score = 113 bits (283), Expect = 2e-23, Method: Composition-based stats. Identities = 43/174 (24%), Positives = 74/174 (42%), Gaps = 21/174 (12%) Query: 45 EKHWKEVHDEKIKALEVI---IEKANAAPIIVAYHFNSDL---ARLQKAFPQG-----RT 93 ++ K + K+ LE + I I++ ++ S L RL + G T Sbjct: 553 DREVKPWYSGKMMVLERMLARIRAETNDKIVLISNYTSTLDLFERLCRNRAYGCLRLDGT 612 Query: 94 LD--KDPCTIQEWNE--GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIE 149 ++ K + +N+ G + + G GLNL G N LV F W+ QQ + Sbjct: 613 MNVSKRQKLVDRFNDPDGSEFIFLLSSKAGGCGLNL-IGANRLVLFDPDWNPAADQQALA 671 Query: 150 RIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETI 203 R+ + G K+ FVY IA TI+E + QR K ++ +++A + + Sbjct: 672 RVW-----RDGQKKDCFVYRFIATGTIEEKIFQRQSHKQSLSTCVVDAAAGDDV 720 >gi|224070615|ref|XP_002303179.1| chromatin remodeling complex subunit [Populus trichocarpa] gi|222840611|gb|EEE78158.1| chromatin remodeling complex subunit [Populus trichocarpa] Length = 1682 Score = 113 bits (283), Expect = 2e-23, Method: Composition-based stats. Identities = 37/167 (22%), Positives = 74/167 (44%), Gaps = 19/167 (11%) Query: 44 EEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQ---------KAFPQGR 92 ++ + K++ L +++ K + +++ L L+ G Sbjct: 663 PDRRLIQFDCGKLQELAILLRKLKSEGHRVLIFTQMTKMLDILEAFINLYGYTYMRLDGS 722 Query: 93 TLDKDPCTI-QEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 T +D T+ Q +N KI + S G G+NL G + ++F+ W+ QQ +R Sbjct: 723 TQPEDRQTLMQRFNTNPKIFIFILSTRSGGVGINL-VGADTVIFYDSDWNPAMDQQAQDR 781 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + G R V +Y LI+++TI+E +L++ K + DL++ + Sbjct: 782 C-----HRIGQTREVHIYRLISESTIEENILKKANQKRALDDLVIQS 823 >gi|326434418|gb|EGD79988.1| BRG1 protein [Salpingoeca sp. ATCC 50818] Length = 1726 Score = 113 bits (283), Expect = 2e-23, Method: Composition-based stats. Identities = 29/156 (18%), Positives = 61/156 (39%), Gaps = 19/156 (12%) Query: 55 KIKALEVIIEKA--NAAPIIVAYHFNSDLARLQKAFPQGRTL-----------DKDPCTI 101 K++AL+ ++ + +++ + L+ + D+ Sbjct: 1408 KLQALDRLLSRLKKEGHRVLIYSQMTRMIDILEDFMTYRKYKYMRLDGSCKISDRRDMVA 1467 Query: 102 QEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGF 161 + I + G G+NL + ++F+ W+ QQ ++R + G Sbjct: 1468 DFQSRDDIFAFILSTRAGGIGINLT-AADTVIFYDSDWNPTVDQQAMDR-----AHRLGQ 1521 Query: 162 KRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 R V VY LI + T++E +L R + KS + L++ Sbjct: 1522 TRPVTVYRLITKGTVEERILHRAQEKSKVHQLVIQG 1557 >gi|268324723|emb|CBH38311.1| hypothetical protein containing helicase conserved C-terminal domain [uncultured archaeon] Length = 205 Score = 113 bits (283), Expect = 2e-23, Method: Composition-based stats. Identities = 35/186 (18%), Positives = 68/186 (36%), Gaps = 21/186 (11%) Query: 30 VKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKA 87 +K Q+ N + ++ K+ LE ++E+ A ++ F L+ Sbjct: 1 MKLKQITNHPALFLQDGSPLPGRSGKLARLEAMLEEVLAEGDKALIFTQFAGMGVMLRHY 60 Query: 88 FPQ-----------GRTLDKDPCTIQEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVF 134 + G T + I + PL + G GLNL N + Sbjct: 61 LQEKLGCETLFLHGGTTKKQRDAMILRFQTDPHGPPLFILSLKAGGIGLNLT-AANHVFH 119 Query: 135 FSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 F WW+ Q +R+ + G ++ V V+ I T++E + Q + K + + + Sbjct: 120 FDRWWNPAVENQATDRVF-----RIGQRKNVQVHKFICIGTLEERIDQMIERKKELAESI 174 Query: 195 LNALKK 200 + A + Sbjct: 175 IGAGEA 180 >gi|257463846|ref|ZP_05628233.1| SWF/SNF family helicase [Fusobacterium sp. D12] gi|317061380|ref|ZP_07925865.1| metal dependent hydrolase [Fusobacterium sp. D12] gi|313687056|gb|EFS23891.1| metal dependent hydrolase [Fusobacterium sp. D12] Length = 1134 Score = 113 bits (283), Expect = 2e-23, Method: Composition-based stats. Identities = 40/178 (22%), Positives = 71/178 (39%), Gaps = 20/178 (11%) Query: 29 TVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEK-ANAAPIIVAYHFNSDLARLQKA 87 + Q+ + E K+ +K LE I E N ++V ++ + + K+ Sbjct: 947 LNELRQITSCP----EIKNAYISSSKKEMLLEQISEAVENDHKVLVFTNYIGSIDTICKS 1002 Query: 88 FPQ---------GRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLW 138 + G T D+ + K + + G GLNL + + + W Sbjct: 1003 LEEQEIPYLSMTGSTKDRQQLVNKFQKNEKYKVFVMTLKTGGVGLNLT-AADTIFIYDPW 1061 Query: 139 WDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 W+ Q I+R + G R VF Y LI ++TI+E +LQ KS + D +++ Sbjct: 1062 WNKTVENQAIDR-----AYRLGQDRTVFSYKLILKDTIEEKILQLQELKSKLLDDVIS 1114 >gi|254416145|ref|ZP_05029900.1| SNF2 family N-terminal domain protein [Microcoleus chthonoplastes PCC 7420] gi|196177078|gb|EDX72087.1| SNF2 family N-terminal domain protein [Microcoleus chthonoplastes PCC 7420] Length = 1059 Score = 113 bits (282), Expect = 2e-23, Method: Composition-based stats. Identities = 34/214 (15%), Positives = 73/214 (34%), Gaps = 24/214 (11%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSA--SKTVKCLQLANGAVYYDEEKHWK-EVHDEKIKA 58 Y K E +++ + ++ Q+ N +EK K K+ Sbjct: 825 ALYQKLVDESLVEIEAAEGIKRKGLILTLLMRLKQVCNHPAQLLKEKSLKDAKRSGKLLR 884 Query: 59 LEVIIEKA--NAAPIIVAYHF------------NSDLARLQKAFPQGRTLDKDPCTIQEW 104 L+ ++++A ++ F + + R ++ + Sbjct: 885 LQEMLDEAISEGDRALIFTQFAEWGKLLKPYLAKQFDQEILFLYGATRKKQREEMIDRFQ 944 Query: 105 NEGK-IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKR 163 N+ + P+L + G GLNL N + WW+ Q +R + G R Sbjct: 945 NDPEGPPILILSLKAGGTGLNLTR-ANHVFHIDRWWNPAVENQATDR-----AFRIGQTR 998 Query: 164 AVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 V V+ + T++E + + +K + + + A Sbjct: 999 NVQVHKFVCTGTLEERINDMIESKKQLAEQTVEA 1032 >gi|209525614|ref|ZP_03274152.1| Non-specific serine/threonine protein kinase [Arthrospira maxima CS-328] gi|209493947|gb|EDZ94264.1| Non-specific serine/threonine protein kinase [Arthrospira maxima CS-328] Length = 1058 Score = 113 bits (282), Expect = 2e-23, Method: Composition-based stats. Identities = 35/219 (15%), Positives = 75/219 (34%), Gaps = 30/219 (13%) Query: 3 QYHKFQRELYCDLQGENIEAFNS--ASKTVKCLQLANGAVYYDEEKHWKEVH-------D 53 Y K E +++ VK Q+ N + + K+ Sbjct: 815 LYQKLVDESLSEIESSTGIQRRGMILGLLVKLKQVCNHPLLLGAKTKAKKESPTLNPSYS 874 Query: 54 EKIKALEVIIEK--ANAAPIIVAYHF-------NSDLARLQKA---FPQGRTLD-KDPCT 100 K++ L ++E+ + ++ F L F G T + Sbjct: 875 GKLQRLNEMLEELISEGDRALIFTQFAEWGKLLKPYLEAKLNREILFLYGGTRKLQREQM 934 Query: 101 IQEWNEGKI--PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQ 158 + + + P++ + G GLNL N + F WW+ Q +R+ + Sbjct: 935 VDRFQQDPQGPPVMILSLKAGGVGLNLTR-ANHVFHFDRWWNPAVENQATDRVF-----R 988 Query: 159 AGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 G R V V+ + T++E + + +K + + ++++ Sbjct: 989 IGQTRNVQVHKFVCTGTLEEKIHDLIESKQALAEQVVSS 1027 >gi|320164356|gb|EFW41255.1| DNA helicase [Capsaspora owczarzaki ATCC 30864] Length = 1777 Score = 113 bits (282), Expect = 2e-23, Method: Composition-based stats. Identities = 32/167 (19%), Positives = 66/167 (39%), Gaps = 19/167 (11%) Query: 44 EEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQK----------AFPQG 91 ++ K+ L+ ++ K A +++ + L++ Sbjct: 1456 PDRSRLITDSIKMVVLDKLLTKLKAEGHRVLIYSQMTKMIDLLEEFMNFRLHRYVRLDGQ 1515 Query: 92 RTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 T++ + + I + + G G+NL + ++F+ W+ QQ ++R Sbjct: 1516 TTIETRNNMVSNFQTRSDIFVFLLSTRAGGVGINLT-AADTVIFYDSDWNPTVDQQAMDR 1574 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + G R V VY LIA+ T++E +L R R KS I +++ Sbjct: 1575 -----SHRLGQTRQVTVYRLIAKGTVEERILARARQKSEIHKMVIAG 1616 >gi|213019863|ref|ZP_03335663.1| helicase, SNF2 family [Wolbachia endosymbiont of Culex quinquefasciatus JHB] gi|212994547|gb|EEB55195.1| helicase, SNF2 family [Wolbachia endosymbiont of Culex quinquefasciatus JHB] Length = 917 Score = 113 bits (282), Expect = 2e-23, Method: Composition-based stats. Identities = 31/187 (16%), Positives = 72/187 (38%), Gaps = 22/187 (11%) Query: 26 ASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVI---IEKANAAPIIVAYHFNSDLA 82 Q+ N ++ ++K K++ LE I I + ++ + Sbjct: 715 LKLINALKQVCNHPSHFGKKKRASIEQSGKMQMLEEILIGISELAEKS-LIFTQYTEMGE 773 Query: 83 RLQKAFPQ-----------GRTLDKDPCTIQEW-NEGKIPLLFAHPASCGHGLNLQYGGN 130 + + + + + ++ N + +L + G GLNL N Sbjct: 774 IIARLLEEKFESKVPFLHGSLSRKARDKMVNDFENSFRSNILIVSLKAGGTGLNLT-AAN 832 Query: 131 ILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 ++ + LWW+ Q +R + G +R V VY L++ T +E + + +++K + Sbjct: 833 HVIHYDLWWNPAVEAQATDR-----AYRIGQERNVMVYRLLSTGTFEERIDEMIQSKKEL 887 Query: 191 QDLLLNA 197 +L +++ Sbjct: 888 ANLTISS 894 >gi|189190036|ref|XP_001931357.1| helicase SWR1 [Pyrenophora tritici-repentis Pt-1C-BFP] gi|187972963|gb|EDU40462.1| helicase SWR1 [Pyrenophora tritici-repentis Pt-1C-BFP] Length = 1760 Score = 113 bits (282), Expect = 2e-23, Method: Composition-based stats. Identities = 36/200 (18%), Positives = 82/200 (41%), Gaps = 25/200 (12%) Query: 15 LQGENIEAFNSASKTVKCLQLANG---AVYYDEEKHWKEVHDE-KIKALEVIIEK--ANA 68 L+ + A + + K Q N + + + V D K+ L+ ++++ AN Sbjct: 1447 LEAKTESA--ALTVCNKLPQPTNERTRFTHIEAPSMSRFVTDSGKLAQLDALLKELKAND 1504 Query: 69 APIIVAYHFNSDLARLQKAF---------PQGRTLDKDPCT-IQEWNEGK-IPLLFAHPA 117 +++ + + +++ G T +D + ++ + I + Sbjct: 1505 HRVLLYFQMTRMMDLMEEYLTYRNYKYCRLDGSTKLEDRRDTVADFQSDRSIFVFLLSTR 1564 Query: 118 SCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 + G G+NL + ++F+ W+ Q ++R + G R V VY LI + TI+ Sbjct: 1565 AGGLGINLT-SADTVIFYDSDWNPTIDSQAMDR-----AHRLGQTRQVTVYRLITRGTIE 1618 Query: 178 ELVLQRLRTKSTIQDLLLNA 197 E + +R K +Q ++++ Sbjct: 1619 ERIRKRALQKEEVQRVVISG 1638 >gi|325000735|ref|ZP_08121847.1| putative ATP-dependent helicase [Pseudonocardia sp. P1] Length = 571 Score = 113 bits (282), Expect = 2e-23, Method: Composition-based stats. Identities = 35/214 (16%), Positives = 72/214 (33%), Gaps = 27/214 (12%) Query: 3 QYHKFQRELYCDLQGEN--IEAFNSASKTVKCLQLANGAVYYDEEKHWKEVH-----DEK 55 Y ++ ++G + N + K Q+ N + K Sbjct: 329 LYRTVVDDMMEKIEGSDGIERRGNVLAAMSKLKQVCNHPAQLLHDGSPIHRAGGAHRSGK 388 Query: 56 IKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFP-----------QGRTLDKDPCTIQ 102 + LE I+E A +++ + A L+ G + + Sbjct: 389 VARLEEILESVLAAGDKVLLFTQYTEFAAMLRPHLSARFDTEVLYLHGGTPKKRRDEMVA 448 Query: 103 EWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGF 161 + +G + + G GL L N ++ WW+ Q +R + G Sbjct: 449 RFQGDGGPSVFLLSLKAGGTGLTLT-AANHVIHLDRWWNPAVEDQATDR-----AFRIGQ 502 Query: 162 KRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 KR+V V + T++E + + +K ++ DL++ Sbjct: 503 KRSVQVRKFVCPGTVEERIDTLVASKRSLSDLVV 536 >gi|289616366|emb|CBI56893.1| unnamed protein product [Sordaria macrospora] Length = 2008 Score = 113 bits (282), Expect = 2e-23, Method: Composition-based stats. Identities = 27/159 (16%), Positives = 62/159 (38%), Gaps = 19/159 (11%) Query: 50 EVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQKAF---------PQGRTL--DK 96 K+ L+ ++ + N +++ + + +++ G T D+ Sbjct: 1704 VTDSGKLAKLDELLRELKENGHRVLLYFQMTRMIDLMEEYLTYRNYKYCRLDGSTKLEDR 1763 Query: 97 DPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 +I + + G G+NL + ++F+ W+ Q ++R Sbjct: 1764 RDTVADFQTRPEIFIFLLSTRAGGLGINLT-SADTVIFYDSDWNPTIDSQAMDR-----A 1817 Query: 157 RQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 + G + V VY LI + TI+E + +R K +Q +++ Sbjct: 1818 HRLGQTKQVTVYRLITRGTIEERIRKRAMQKEEVQRVVI 1856 >gi|145616124|ref|XP_361006.2| hypothetical protein MGG_03549 [Magnaporthe oryzae 70-15] gi|145009888|gb|EDJ94544.1| hypothetical protein MGG_03549 [Magnaporthe oryzae 70-15] Length = 819 Score = 113 bits (282), Expect = 2e-23, Method: Composition-based stats. Identities = 41/175 (23%), Positives = 73/175 (41%), Gaps = 21/175 (12%) Query: 45 EKHWKEVHDEKIKALEVI---IEKANAAPIIVAYHFNSDL---ARLQKAFPQGRTL---- 94 ++ K + K++ L+ + I I++ ++ S L RL + G Sbjct: 567 DREIKPWYSGKMQVLDRMLARIRADTNDKIVLISNYTSTLDLFERLCRNRGYGSLRLDGT 626 Query: 95 ---DKDPCTIQEWN--EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIE 149 K + ++N EG + + G GLNL G N LV F W+ QQ + Sbjct: 627 MNVTKRQKLVDKFNDPEGSEFVFLLSSKAGGCGLNL-IGANRLVLFDPDWNPAADQQALA 685 Query: 150 RIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIH 204 R+ + G K+ FVY IA +I+E + QR K ++ ++++ + H Sbjct: 686 RVW-----RDGQKKDCFVYRFIATGSIEEKIFQRQSHKQSLSSCVVDSAEDVERH 735 >gi|22775414|dbj|BAC11858.1| recombinational repair protein [Magnaporthe grisea] Length = 803 Score = 113 bits (282), Expect = 2e-23, Method: Composition-based stats. Identities = 41/175 (23%), Positives = 73/175 (41%), Gaps = 21/175 (12%) Query: 45 EKHWKEVHDEKIKALEVI---IEKANAAPIIVAYHFNSDL---ARLQKAFPQGRTL---- 94 ++ K + K++ L+ + I I++ ++ S L RL + G Sbjct: 551 DREIKPWYSGKMQVLDRMLARIRADTNDKIVLISNYTSTLDLFERLCRNRGYGSLRLDGT 610 Query: 95 ---DKDPCTIQEWN--EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIE 149 K + ++N EG + + G GLNL G N LV F W+ QQ + Sbjct: 611 MNVTKRQKLVDKFNDPEGSEFVFLLSSKAGGCGLNL-IGANRLVLFDPDWNPAADQQALA 669 Query: 150 RIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIH 204 R+ + G K+ FVY IA +I+E + QR K ++ ++++ + H Sbjct: 670 RVW-----RDGQKKDCFVYRFIATGSIEEKIFQRQSHKQSLSSCVVDSAEDVERH 719 >gi|297583813|ref|YP_003699593.1| SNF2-like protein [Bacillus selenitireducens MLS10] gi|297142270|gb|ADH99027.1| SNF2-related protein [Bacillus selenitireducens MLS10] Length = 919 Score = 113 bits (282), Expect = 2e-23, Method: Composition-based stats. Identities = 42/214 (19%), Positives = 79/214 (36%), Gaps = 25/214 (11%) Query: 3 QYHKFQRELYCDLQGENIEAFNSA--SKTVKCLQLANGAVYYDEE---KHWKEVHDEKIK 57 Y E++ + +A +K QL N +E + K Sbjct: 691 MYKAVVEEMFDQYEEAPDPVKRAALFKTMMKLKQLCNHPAQARKELGLNRFNPGRSPKWD 750 Query: 58 ALEVIIE--KANAAPIIVAYHFNS------DLARLQKAFP-----QGRTLDKDPCTIQEW 104 ++ IV F ++ +Q P G T + I+ + Sbjct: 751 LANELLSNWANQGKRAIVFTQFRYTGAMFQEMQLIQGNPPVPFLHGGLTAIQRKNMIRSF 810 Query: 105 -NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKR 163 + IP + + G GLNL + ++ F WW+ Q +R+ + G K+ Sbjct: 811 KDNPDIPFMIISLRAGGFGLNLTE-ASAVLHFDRWWNPAVEDQATDRV-----HRIGQKQ 864 Query: 164 AVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 AV V+ L+A+ TI+E + ++ K +Q+ L++ Sbjct: 865 AVEVHTLMAEGTIEERIDDLIQKKQQLQEALIDG 898 >gi|257452288|ref|ZP_05617587.1| SWF/SNF family helicase [Fusobacterium sp. 3_1_5R] Length = 1134 Score = 113 bits (282), Expect = 2e-23, Method: Composition-based stats. Identities = 39/178 (21%), Positives = 72/178 (40%), Gaps = 20/178 (11%) Query: 29 TVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEK-ANAAPIIVAYHFNSDLARLQKA 87 + Q+ + E K+ +K +E I+E N ++V ++ + + K+ Sbjct: 947 LNELRQITSCP----EVKNSYISSSKKEMLIEQIVEAVENDHKVLVFTNYIGSIENICKS 1002 Query: 88 FPQ---------GRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLW 138 + G T D+ + K + + G GLNL + + + W Sbjct: 1003 LEEREIAYLSMTGSTKDRQQLVNKFQKNEKYKVFVMTLKTGGVGLNLT-AADTIFIYDPW 1061 Query: 139 WDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 W+ Q I+R + G R VF Y LI ++TI+E +LQ KS + D +++ Sbjct: 1062 WNKTVENQAIDR-----AYRLGQDRTVFSYKLILKDTIEEKILQLQELKSKLLDDVIS 1114 >gi|315917068|ref|ZP_07913308.1| SWF/SNF family helicase [Fusobacterium gonidiaformans ATCC 25563] gi|313690943|gb|EFS27778.1| SWF/SNF family helicase [Fusobacterium gonidiaformans ATCC 25563] Length = 1143 Score = 113 bits (282), Expect = 2e-23, Method: Composition-based stats. Identities = 39/178 (21%), Positives = 72/178 (40%), Gaps = 20/178 (11%) Query: 29 TVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEK-ANAAPIIVAYHFNSDLARLQKA 87 + Q+ + E K+ +K +E I+E N ++V ++ + + K+ Sbjct: 956 LNELRQITSCP----EVKNSYISSSKKEMLIEQIVEAVENDHKVLVFTNYIGSIENICKS 1011 Query: 88 FPQ---------GRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLW 138 + G T D+ + K + + G GLNL + + + W Sbjct: 1012 LEEREIAYLSMTGSTKDRQQLVNKFQKNEKYKVFVMTLKTGGVGLNLT-AADTIFIYDPW 1070 Query: 139 WDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 W+ Q I+R + G R VF Y LI ++TI+E +LQ KS + D +++ Sbjct: 1071 WNKTVENQAIDR-----AYRLGQDRTVFSYKLILKDTIEEKILQLQELKSKLLDDVIS 1123 >gi|257465912|ref|ZP_05630223.1| SWF/SNF family helicase [Fusobacterium gonidiaformans ATCC 25563] Length = 1134 Score = 113 bits (282), Expect = 2e-23, Method: Composition-based stats. Identities = 39/178 (21%), Positives = 72/178 (40%), Gaps = 20/178 (11%) Query: 29 TVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEK-ANAAPIIVAYHFNSDLARLQKA 87 + Q+ + E K+ +K +E I+E N ++V ++ + + K+ Sbjct: 947 LNELRQITSCP----EVKNSYISSSKKEMLIEQIVEAVENDHKVLVFTNYIGSIENICKS 1002 Query: 88 FPQ---------GRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLW 138 + G T D+ + K + + G GLNL + + + W Sbjct: 1003 LEEREIAYLSMTGSTKDRQQLVNKFQKNEKYKVFVMTLKTGGVGLNLT-AADTIFIYDPW 1061 Query: 139 WDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 W+ Q I+R + G R VF Y LI ++TI+E +LQ KS + D +++ Sbjct: 1062 WNKTVENQAIDR-----AYRLGQDRTVFSYKLILKDTIEEKILQLQELKSKLLDDVIS 1114 >gi|260946861|ref|XP_002617728.1| hypothetical protein CLUG_03172 [Clavispora lusitaniae ATCC 42720] gi|238849582|gb|EEQ39046.1| hypothetical protein CLUG_03172 [Clavispora lusitaniae ATCC 42720] Length = 1284 Score = 113 bits (282), Expect = 2e-23, Method: Composition-based stats. Identities = 26/158 (16%), Positives = 65/158 (41%), Gaps = 19/158 (12%) Query: 53 DEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQK----------AFPQGRTLDKDPCT 100 K+ L+ ++++ N ++V + + +++ L+ Sbjct: 1059 SGKLSKLDKLLDELKQNDHRVLVYFQMTKMMDLMEEFLTFRQHNYVRLDGSSKLEDRRDL 1118 Query: 101 IQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQA 159 + +W + +I + + G G+NL + ++F+ W+ Q ++R + Sbjct: 1119 VHDWQTKPEIFVFLLSTRAGGLGINLT-AADTVIFYDSDWNPTIDSQAMDR-----AHRL 1172 Query: 160 GFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 G + V VY L+ + TI+E + R + K +Q +++ Sbjct: 1173 GQTKQVTVYRLLTKGTIEERMRDRAKQKEQVQQVVMEG 1210 >gi|158339003|ref|YP_001520180.1| SNF2 family helicase [Acaryochloris marina MBIC11017] gi|158309244|gb|ABW30861.1| SNF2 family helicase [Acaryochloris marina MBIC11017] Length = 1091 Score = 113 bits (282), Expect = 2e-23, Method: Composition-based stats. Identities = 39/221 (17%), Positives = 81/221 (36%), Gaps = 37/221 (16%) Query: 2 KQYHKFQRELYCDLQGENIEAFNS-------ASKTVKCLQLANGAVY--YDEEKHWKEVH 52 K Y +E + ++A + VK Q+ N ++E Sbjct: 853 KLYQTTVQESL-----DAVDAAKGIQRRGIILATLVKLKQICNHPAQYLHEETLDLDLQR 907 Query: 53 DEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQKAFPQ------------GRTLDKDP 98 K+K L+ ++E+ ++ F ++L +L + + Q G + + Sbjct: 908 SGKLKRLQEMLEELLDEGDRALIFTQF-AELGKLLQQYLQTKLQRETLLLYGGSSKKQRE 966 Query: 99 CTIQEWNEGKI--PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 I + + + G GLNL N + F WW+ Q +R+ Sbjct: 967 SMIDRFQHDPQGPRIFILSLKAGGVGLNLTR-ANHVFHFDRWWNPAVENQATDRVF---- 1021 Query: 157 RQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + G R V V+ + T++E + ++L +K + + ++ A Sbjct: 1022 -RIGQTRNVQVHKFVCTGTLEERIHEQLESKKALAEQVVGA 1061 >gi|309364522|emb|CAP24766.2| hypothetical protein CBG_03965 [Caenorhabditis briggsae AF16] Length = 1109 Score = 113 bits (282), Expect = 2e-23, Method: Composition-based stats. Identities = 41/165 (24%), Positives = 74/165 (44%), Gaps = 20/165 (12%) Query: 53 DEKIKALEVIIEKANAA--PIIVAYHFNSDLARLQKAFPQ---------GRTLDKDPCT- 100 K+KA I+ +A ++V + S L ++K + G+ L KD Sbjct: 937 SCKMKATLEILNEATEKNEKVVVVSQWTSVLDLIKKHVKENGIRYTSITGQVLVKDRQER 996 Query: 101 IQEWN--EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQ 158 + +N +G ++ + G GLNL GGN L+ L W+ QQ +RI + Sbjct: 997 VDSFNQEKGGANVMLLSLTAGGVGLNL-CGGNHLIMVDLHWNPALEQQAFDRI-----YR 1050 Query: 159 AGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETI 203 G K+ VF++ L+ NTI++ V + ++K + +L+ + Sbjct: 1051 MGQKKPVFIHRLVTNNTIEQRVAELQKSKLQLASSILDGTATRKM 1095 >gi|146299520|ref|YP_001194111.1| non-specific serine/threonine protein kinase [Flavobacterium johnsoniae UW101] gi|146153938|gb|ABQ04792.1| Non-specific serine/threonine protein kinase [Flavobacterium johnsoniae UW101] Length = 966 Score = 112 bits (281), Expect = 2e-23, Method: Composition-based stats. Identities = 46/211 (21%), Positives = 83/211 (39%), Gaps = 25/211 (11%) Query: 2 KQYHKFQ---RELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKA 58 K Y + + R G + + + +K QL+N D+E E+ K A Sbjct: 747 KLYEQEKSKARNFLLKTDGSGPDKISIINTLMKLRQLSNHPKMVDQE---SEIDSGKYIA 803 Query: 59 LEVIIEKA--NAAPIIVAYHFNSDLA---------RLQKAFPQGRT-LDKDPCTIQEWNE 106 + +E +I+ F ++L ++ G T K ++ + E Sbjct: 804 VTNYLENLVKAKQKVIIFSSFVTNLNFYTDWCKENKITYCEITGETPAAKREQQVKLFQE 863 Query: 107 GKIPL-LFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 + PL F + G GLN+ + ++F WW+ +Q GV R + G V Sbjct: 864 KEEPLLFFISLKAGGVGLNITK-ASYVLFLDPWWNPFAEKQ-----GVGRAHRIGQLNKV 917 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 V I++NT++E +++ K + D LL Sbjct: 918 NVVRFISKNTVEEKIIKLQENKKLLSDSLLE 948 >gi|158333854|ref|YP_001515026.1| SNF2 family helicase putative [Acaryochloris marina MBIC11017] gi|158304095|gb|ABW25712.1| helicase, SNF2 family, putative [Acaryochloris marina MBIC11017] Length = 1060 Score = 112 bits (281), Expect = 2e-23, Method: Composition-based stats. Identities = 38/213 (17%), Positives = 77/213 (36%), Gaps = 28/213 (13%) Query: 3 QYHKFQRELYCDLQGENIEAFN----SASKTVKCLQLANGA-VYYDEEKHWKEVHDEKIK 57 Y +E+ D+ + ++ S +K Q+ N + +E + K+ Sbjct: 828 LYEAVVKEISKDI--DEVDGIQRKGMILSTLLKLKQICNHPRQFLQDESDFTPERSHKLS 885 Query: 58 ALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQ-----------GRTLDKDPCTIQEW 104 L +I + ++V F L+K Q G +K I E+ Sbjct: 886 RLTEMITEVMEEGESLLVFTQFTELGDALEKYLRQTHHYTTYYIHGGTNRNKREQMITEF 945 Query: 105 NEGKI--PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFK 162 + + + + G G+ L N + F WW+ Q +R + G K Sbjct: 946 QDPETGPSVFILSLKAGGVGITLTK-ANHVFHFDRWWNPAVEDQATDR-----AFRIGQK 999 Query: 163 RAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 + VFV+ +A T++E + + + K + ++ Sbjct: 1000 KNVFVHKFVAIGTLEERIDEMIEDKKKLAGAIV 1032 >gi|255083104|ref|XP_002504538.1| SNF2 super family [Micromonas sp. RCC299] gi|226519806|gb|ACO65796.1| SNF2 super family [Micromonas sp. RCC299] Length = 1999 Score = 112 bits (281), Expect = 3e-23, Method: Composition-based stats. Identities = 33/167 (19%), Positives = 67/167 (40%), Gaps = 19/167 (11%) Query: 44 EEKHWKEVHDEKIKALEVI--IEKANAAPIIVAYHFNSDLARLQ---------KAFPQGR 92 ++ + K++AL + ++K+ +++ L L+ G Sbjct: 1186 PDRRLVQFDCGKLQALATLLRMKKSGGHKVLIFTQMTKMLDILEAFLNLYGYPYCRLDGT 1245 Query: 93 TLDKDPC-TIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 T + +Q +N + ++ S G G+NL G + +VF+ W+ QQ Sbjct: 1246 TRPEQRQIMMQRFNTDPRLFAFILSTRSGGFGINLT-GADTVVFYDSDWNPAMDQQA--- 1301 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 R + G R V +Y L+ + TI+E +L++ K + + A Sbjct: 1302 --QDRAHRIGQTREVHIYRLVCKGTIEENILRKSMQKRELDHFAIQA 1346 >gi|215487691|ref|YP_002330122.1| predicted helicase [Escherichia coli O127:H6 str. E2348/69] gi|312967725|ref|ZP_07781940.1| putative helicase [Escherichia coli 2362-75] gi|215265763|emb|CAS10170.1| predicted helicase [Escherichia coli O127:H6 str. E2348/69] gi|312287922|gb|EFR15827.1| putative helicase [Escherichia coli 2362-75] Length = 1149 Score = 112 bits (281), Expect = 3e-23, Method: Composition-based stats. Identities = 37/213 (17%), Positives = 80/213 (37%), Gaps = 27/213 (12%) Query: 2 KQYHKFQRELYCDLQGENIEAFN----SASKTVKCLQLANGAVYYDEEKHWKEVHDEKIK 57 Y RE ++GE+ +AF + Q+ N +Y + K K + Sbjct: 921 AIYASVVREGMQVIRGES-DAFQRQGLVLQMIMALKQVCNHPAHYLKNKQMDAALSGKAQ 979 Query: 58 ALEVIIEKANAA--PIIVAYHFNSDLARLQKAFPQGR-------------TLDKDPCTIQ 102 L +++ +++ F ++ L +++ R +D + Sbjct: 980 LLLDLLDSIEETTEKVLIFTQFK-EMGELLQSWLTARYGEQPLFLHGGLSRKKRDEQVER 1038 Query: 103 EWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFK 162 N+ + + G GLNL + ++ + LWW+ Q +R + G + Sbjct: 1039 FQNDRSVRHFILSLKAGGTGLNLT-AASQVIHYDLWWNPAVEAQATDR-----AYRIGQQ 1092 Query: 163 RAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 R V V+ L+ + T +E + +R K + ++ + Sbjct: 1093 RNVQVHRLLTRETFEERINDMIRNKKALAEMTV 1125 >gi|292559006|gb|ADE32007.1| SWIM domain-containing protein [Streptococcus suis GZ1] Length = 1037 Score = 112 bits (281), Expect = 3e-23, Method: Composition-based stats. Identities = 27/141 (19%), Positives = 52/141 (36%), Gaps = 16/141 (11%) Query: 67 NAAPIIVAYHFNSDLARLQKAFPQ----------GRTLDKDPCTIQEWNEGKIPLLFAHP 116 +++ F + L ++++ + ++ Q +N G Sbjct: 884 GEHRVLIFSQFRNMLEKIEEQLIEIGMTSYTLTGSTPANQRQEMTQAFNAGSRDAFLISL 943 Query: 117 ASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTI 176 + G GLNL G + ++ LWW+ Q I R + G V Y LI + TI Sbjct: 944 KAGGVGLNLT-GADTVILVDLWWNPAVEAQAISR-----AHRMGQTEKVECYRLITRGTI 997 Query: 177 DELVLQRLRTKSTIQDLLLNA 197 +E + + K + +L+ Sbjct: 998 EEKIQELQENKKNLVKTVLDG 1018 >gi|317058831|ref|ZP_07923316.1| SWF/SNF family helicase [Fusobacterium sp. 3_1_5R] gi|313684507|gb|EFS21342.1| SWF/SNF family helicase [Fusobacterium sp. 3_1_5R] Length = 1009 Score = 112 bits (281), Expect = 3e-23, Method: Composition-based stats. Identities = 39/178 (21%), Positives = 72/178 (40%), Gaps = 20/178 (11%) Query: 29 TVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEK-ANAAPIIVAYHFNSDLARLQKA 87 + Q+ + E K+ +K +E I+E N ++V ++ + + K+ Sbjct: 822 LNELRQITSCP----EVKNSYISSSKKEMLIEQIVEAVENDHKVLVFTNYIGSIENICKS 877 Query: 88 FPQ---------GRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLW 138 + G T D+ + K + + G GLNL + + + W Sbjct: 878 LEEREIAYLSMTGSTKDRQQLVNKFQKNEKYKVFVMTLKTGGVGLNLT-AADTIFIYDPW 936 Query: 139 WDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 W+ Q I+R + G R VF Y LI ++TI+E +LQ KS + D +++ Sbjct: 937 WNKTVENQAIDR-----AYRLGQDRTVFSYKLILKDTIEEKILQLQELKSKLLDDVIS 989 >gi|253752403|ref|YP_003025544.1| putative helicase [Streptococcus suis SC84] gi|253754229|ref|YP_003027370.1| helicase [Streptococcus suis P1/7] gi|253756163|ref|YP_003029303.1| helicase [Streptococcus suis BM407] gi|251816692|emb|CAZ52333.1| putative helicase [Streptococcus suis SC84] gi|251818627|emb|CAZ56461.1| putative helicase [Streptococcus suis BM407] gi|251820475|emb|CAR47204.1| putative helicase [Streptococcus suis P1/7] gi|319758808|gb|ADV70750.1| SNF2 family DNA/RNA helicase [Streptococcus suis JS14] Length = 1030 Score = 112 bits (281), Expect = 3e-23, Method: Composition-based stats. Identities = 27/141 (19%), Positives = 52/141 (36%), Gaps = 16/141 (11%) Query: 67 NAAPIIVAYHFNSDLARLQKAFPQ----------GRTLDKDPCTIQEWNEGKIPLLFAHP 116 +++ F + L ++++ + ++ Q +N G Sbjct: 877 GEHRVLIFSQFRNMLEKIEEQLIEIGMTSYTLTGSTPANQRQEMTQAFNAGSRDAFLISL 936 Query: 117 ASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTI 176 + G GLNL G + ++ LWW+ Q I R + G V Y LI + TI Sbjct: 937 KAGGVGLNLT-GADTVILVDLWWNPAVEAQAISR-----AHRMGQTEKVECYRLITRGTI 990 Query: 177 DELVLQRLRTKSTIQDLLLNA 197 +E + + K + +L+ Sbjct: 991 EEKIQELQENKKNLVKTVLDG 1011 >gi|308472052|ref|XP_003098255.1| hypothetical protein CRE_08427 [Caenorhabditis remanei] gi|308269241|gb|EFP13194.1| hypothetical protein CRE_08427 [Caenorhabditis remanei] Length = 205 Score = 112 bits (281), Expect = 3e-23, Method: Composition-based stats. Identities = 36/160 (22%), Positives = 69/160 (43%), Gaps = 20/160 (12%) Query: 56 IKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTL----------DKDPCTIQEWN 105 ++ L I+EK +++ + S L +++ Q + +N Sbjct: 40 LQILSNIVEK--GEKVVIVSQWTSVLELIEEHIKQYAIRYTSITGQIPVKDRQERVDSFN 97 Query: 106 E--GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKR 163 G ++ + G GLNL GGN L+ L W+ QQ +RI + G K+ Sbjct: 98 REVGGAKVMLLSLTAGGVGLNLT-GGNHLIMIDLHWNPALEQQAFDRI-----YRMGQKK 151 Query: 164 AVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETI 203 VF++ LI + TI++ V++ ++K T+ +L+ + Sbjct: 152 PVFIHRLITKGTIEQRVVELQKSKLTLASSVLDGTATRKM 191 >gi|268565237|ref|XP_002639379.1| Hypothetical protein CBG03965 [Caenorhabditis briggsae] Length = 1094 Score = 112 bits (281), Expect = 3e-23, Method: Composition-based stats. Identities = 41/165 (24%), Positives = 74/165 (44%), Gaps = 20/165 (12%) Query: 53 DEKIKALEVIIEKANAA--PIIVAYHFNSDLARLQKAFPQ---------GRTLDKDPCT- 100 K+KA I+ +A ++V + S L ++K + G+ L KD Sbjct: 922 SCKMKATLEILNEATEKNEKVVVVSQWTSVLDLIKKHVKENGIRYTSITGQVLVKDRQER 981 Query: 101 IQEWN--EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQ 158 + +N +G ++ + G GLNL GGN L+ L W+ QQ +RI + Sbjct: 982 VDSFNQEKGGANVMLLSLTAGGVGLNL-CGGNHLIMVDLHWNPALEQQAFDRI-----YR 1035 Query: 159 AGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETI 203 G K+ VF++ L+ NTI++ V + ++K + +L+ + Sbjct: 1036 MGQKKPVFIHRLVTNNTIEQRVAELQKSKLQLASSILDGTATRKM 1080 >gi|146319376|ref|YP_001199088.1| SNF2 family DNA/RNA helicase [Streptococcus suis 05ZYH33] gi|146321581|ref|YP_001201292.1| SNF2 family DNA/RNA helicase [Streptococcus suis 98HAH33] gi|145690182|gb|ABP90688.1| Superfamily II DNA/RNA helicase, SNF2 family [Streptococcus suis 05ZYH33] gi|145692387|gb|ABP92892.1| Superfamily II DNA/RNA helicase, SNF2 family [Streptococcus suis 98HAH33] Length = 1037 Score = 112 bits (281), Expect = 3e-23, Method: Composition-based stats. Identities = 27/141 (19%), Positives = 52/141 (36%), Gaps = 16/141 (11%) Query: 67 NAAPIIVAYHFNSDLARLQKAFPQ----------GRTLDKDPCTIQEWNEGKIPLLFAHP 116 +++ F + L ++++ + ++ Q +N G Sbjct: 884 GEHRVLIFSQFRNMLEKIEEQLIEIGMTSYTLTGSTPANQRQEMTQAFNAGSRDAFLISL 943 Query: 117 ASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTI 176 + G GLNL G + ++ LWW+ Q I R + G V Y LI + TI Sbjct: 944 KAGGVGLNLT-GADTVILVDLWWNPAVEAQAISR-----AHRMGQTEKVECYRLITRGTI 997 Query: 177 DELVLQRLRTKSTIQDLLLNA 197 +E + + K + +L+ Sbjct: 998 EEKIQELQENKKNLVKTVLDG 1018 >gi|46447118|ref|YP_008483.1| hypothetical protein pc1484 [Candidatus Protochlamydia amoebophila UWE25] gi|46400759|emb|CAF24208.1| conserved hypothetical protein [Candidatus Protochlamydia amoebophila UWE25] Length = 1256 Score = 112 bits (281), Expect = 3e-23, Method: Composition-based stats. Identities = 28/205 (13%), Positives = 78/205 (38%), Gaps = 20/205 (9%) Query: 5 HKFQRELYCDLQGEN--IEAFNSASKTVKCLQLANG-AVYYDEEKHWKEVHDEKIKALEV 61 + +R L DL+ + I + + Q+ N AV+ +++ K + Sbjct: 1022 EQRKRHLMQDLKDDQTPIPYLHIFALLSSLKQICNHPAVHLKNPGDYQKYSSGKWELFIE 1081 Query: 62 IIEKANA--APIIVAYHFNSDLARLQKAFPQ---------GRTLDKDPCTIQEWNEGKIP 110 ++ +A +++ + L ++ G T ++ + ++ Sbjct: 1082 LLREARESQQKVVIFSQYLGMLDIIENYLNDQKIGYASIRGSTQNRKEQLQKFNHDPSCE 1141 Query: 111 LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYL 170 + + G G++L ++++ + WW+ Q +R+ + G + V V+ L Sbjct: 1142 VFVGSLQAAGLGIDLT-AASVVIHYDRWWNAARENQATDRV-----HRIGQMKGVQVFKL 1195 Query: 171 IAQNTIDELVLQRLRTKSTIQDLLL 195 + + T +E + + K + + ++ Sbjct: 1196 VTKGTFEEKIDAMINRKGQLMEEII 1220 >gi|19347965|gb|AAL86315.1| putative helicase [Arabidopsis thaliana] Length = 744 Score = 112 bits (281), Expect = 3e-23, Method: Composition-based stats. Identities = 29/160 (18%), Positives = 66/160 (41%), Gaps = 19/160 (11%) Query: 51 VHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAF----------PQGRTLDKDP 98 K++ L++++++ A +++ L L+ T+ Sbjct: 440 TDSGKLQTLDILLKRLRAGNHRVLLFAQMTKMLNILEDYMNYRKYKYLRLDGSSTIMDRR 499 Query: 99 CTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 ++++ I + + G G+NL + ++F+ W+ Q ++R Sbjct: 500 DMVRDFQHRSDIFVFLLSTRAGGLGINLT-AADTVIFYESDWNPTLDLQAMDR-----AH 553 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + G + V VY LI + T++E +L R K+T+Q L++ Sbjct: 554 RLGQTKDVTVYRLICKETVEEKILHRASQKNTVQQLVMTG 593 >gi|326484392|gb|EGE08402.1| DNA repair and recombination protein RAD54 [Trichophyton equinum CBS 127.97] Length = 820 Score = 112 bits (281), Expect = 3e-23, Method: Composition-based stats. Identities = 41/181 (22%), Positives = 71/181 (39%), Gaps = 18/181 (9%) Query: 36 ANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDL---ARLQKAFPQGR 92 +NG E K W + + I + I++ ++ L RL +A G Sbjct: 558 SNGRRGDREVKTWYSGKMMVLDRMLARIRQDTNDKIVLISNYTQTLDLFERLCRARAYGC 617 Query: 93 TL-------DKDPCTIQEWN--EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEE 143 K + ++N G+ + + G G+NL G N LV F W+ Sbjct: 618 IRLDGTMGVKKRSKLVDKFNDPNGEEFVFLLSSKAGGCGINL-VGANRLVLFDPDWNPAA 676 Query: 144 HQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETI 203 QQ + R+ + G + FVY IA TI+E + QR K ++ ++++ + Sbjct: 677 DQQALARVW-----RDGQSKDCFVYRFIATGTIEEKIFQRQSHKQSLSSCVVDSAEDVER 731 Query: 204 H 204 H Sbjct: 732 H 732 >gi|88812636|ref|ZP_01127883.1| helicase, SNF2 family protein [Nitrococcus mobilis Nb-231] gi|88790052|gb|EAR21172.1| helicase, SNF2 family protein [Nitrococcus mobilis Nb-231] Length = 1171 Score = 112 bits (281), Expect = 3e-23, Method: Composition-based stats. Identities = 40/211 (18%), Positives = 73/211 (34%), Gaps = 23/211 (10%) Query: 2 KQYHKFQRELYCDLQGENIEAFN---SASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKA 58 Y RE +QGE+ + Q+ N Y + +H K + Sbjct: 944 AVYESVVREGLEVIQGESDTFQRQGLVLQMILALKQICNHPRQYLNDGATTPMHSGKAQR 1003 Query: 59 LEVIIEKANA--APIIVAYHFNSDLARLQKAFPQG------------RTLDKDPCTIQEW 104 L ++ + + ++V F LQ + +D + Sbjct: 1004 LLELLTETHRLHEKVLVFTQFRKAGELLQGWIAEAFGRTPAFLHGGLSRKQRDALVERFQ 1063 Query: 105 NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA 164 E + + G GLNL + +V F LWW+ Q +R + G + Sbjct: 1064 GERTERVFILSLKAAGTGLNLT-AASQVVHFDLWWNPAVEAQATDR-----AYRIGQSQT 1117 Query: 165 VFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 V V+ LI + T +E + +R+K + +L + Sbjct: 1118 VQVHRLITRATFEERINAMIRSKRALSELTV 1148 >gi|728695|emb|CAA88537.1| DNA helicase type protein [Saccharomyces cerevisiae] Length = 674 Score = 112 bits (281), Expect = 3e-23, Method: Composition-based stats. Identities = 26/158 (16%), Positives = 64/158 (40%), Gaps = 19/158 (12%) Query: 53 DEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQK----------AFPQGRTLDKDPCT 100 K++ L+ ++ K + +++ + + +++ L+ Sbjct: 483 SAKLRKLDELLVKLKSEGHRVLIYFQMTKMMDLMEEYLTYRQYNHIRLDGSSKLEDRRDL 542 Query: 101 IQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQA 159 + +W +I + + G G+NL + ++F+ W+ Q ++R + Sbjct: 543 VHDWQTNPEIFVFLLSTRAGGLGINLT-AADTVIFYDSDWNPTIDSQAMDR-----AHRL 596 Query: 160 GFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 G R V VY L+ + TI+E + R + K +Q +++ Sbjct: 597 GQTRQVTVYRLLVRGTIEERMRDRAKQKEQVQQVVMEG 634 >gi|242793727|ref|XP_002482225.1| SNF2 family helicase/ATPase (Ino80), putative [Talaromyces stipitatus ATCC 10500] gi|218718813|gb|EED18233.1| SNF2 family helicase/ATPase (Ino80), putative [Talaromyces stipitatus ATCC 10500] Length = 1662 Score = 112 bits (280), Expect = 3e-23, Method: Composition-based stats. Identities = 27/161 (16%), Positives = 63/161 (39%), Gaps = 19/161 (11%) Query: 50 EVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQKAF---------PQGRTL--DK 96 K+ L+ ++ + +++ + + +++ G T D+ Sbjct: 1373 VTDSGKLAKLDELLRELKNGGHRVLLYFQMTRMIDLMEEYLTYRNYKYCRLDGSTKLEDR 1432 Query: 97 DPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 + +I + + G G+NL + ++F+ W+ Q ++R Sbjct: 1433 RDTVADFQHRPEIFVFLLSTRAGGLGINLT-AADTVIFYDSDWNPTIDSQAMDR-----A 1486 Query: 157 RQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + G R V VY LI + TI+E + +R K +Q ++++ Sbjct: 1487 HRLGQTRQVTVYRLITRGTIEERIRKRALQKEEVQRVVISG 1527 >gi|68006105|ref|NP_001018299.1| SNF2 family helicase Ino80 [Schizosaccharomyces pombe 972h-] gi|206557976|sp|O14148|INO80_SCHPO RecName: Full=Putative DNA helicase ino80 gi|159884046|emb|CAB16246.2| SNF2 family helicase Ino80 [Schizosaccharomyces pombe] Length = 1604 Score = 112 bits (280), Expect = 3e-23, Method: Composition-based stats. Identities = 25/166 (15%), Positives = 67/166 (40%), Gaps = 19/166 (11%) Query: 52 HDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQK----------AFPQGRTLDKDPC 99 K+ L+ ++ + AN +++ + + +++ + + Sbjct: 1427 DSGKLSKLDKLLVELKANDHRVLIYFQMTRMIDLMEEYLTFRQYKYLRLDGSSKISQRRD 1486 Query: 100 TIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQ 158 + EW ++ + + G G+NL + ++F+ W+ Q ++R + Sbjct: 1487 MVTEWQTRPELFVFLLSTRAGGLGINLT-AADTVIFYDSDWNPSIDSQAMDR-----AHR 1540 Query: 159 AGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIH 204 G ++ V VY I + TI+E ++ R + K +Q ++++ + Sbjct: 1541 IGQQKQVTVYRFITRGTIEERIVIRAKEKEEVQKVVISGGETRPTK 1586 >gi|121806946|sp|Q2UTQ9|INO80_ASPOR RecName: Full=Putative DNA helicase ino80 gi|83764912|dbj|BAE55056.1| unnamed protein product [Aspergillus oryzae] Length = 1444 Score = 112 bits (280), Expect = 3e-23, Method: Composition-based stats. Identities = 28/161 (17%), Positives = 63/161 (39%), Gaps = 19/161 (11%) Query: 50 EVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAF---------PQGRTL--DK 96 K+ L+ ++ + A +++ + + +++ G T D+ Sbjct: 1212 VTDSGKLAKLDELLRELKAGGHRVLLYFQMTRMIDLMEEYLTYRNYKYCRLDGSTKLEDR 1271 Query: 97 DPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 +I + + G G+NL + ++F+ W+ Q ++R Sbjct: 1272 RDTVADFQQRPEIFVFLLSTRAGGLGINLT-AADTVIFYDSDWNPTIDSQAMDR-----A 1325 Query: 157 RQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + G R V VY LI + TI+E + +R K +Q ++++ Sbjct: 1326 HRLGQTRQVTVYRLITRGTIEERIRKRALQKEEVQRVVISG 1366 >gi|262199410|ref|YP_003270619.1| SNF2-related protein [Haliangium ochraceum DSM 14365] gi|262082757|gb|ACY18726.1| SNF2-related protein [Haliangium ochraceum DSM 14365] Length = 1019 Score = 112 bits (280), Expect = 3e-23, Method: Composition-based stats. Identities = 35/187 (18%), Positives = 64/187 (34%), Gaps = 21/187 (11%) Query: 26 ASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLAR 83 S + Q+ N Y E K++ + ++E+A + +V F R Sbjct: 775 LSLLMGLKQICNHPAQYLGEAGPLRRRSGKLERVTEMLEEALAGSDKALVFTQFREMGER 834 Query: 84 LQKAFPQ------------GRTLDKDPCTIQEWNEGKIP-LLFAHPASCGHGLNLQYGGN 130 L F R +D + + P + + G GLNL + Sbjct: 835 LVAHFEDRLGVEVAFLHGGTRRSARDEMVRRFQEQPNGPRVFVLSVKAGGVGLNLT-AAS 893 Query: 131 ILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 + F WW+ Q +R + G V VY + T++E + + L K + Sbjct: 894 HVFHFDRWWNPAVEDQATDR-----AYRIGQTHIVQVYKFLCAGTLEEKIDRMLTKKREL 948 Query: 191 QDLLLNA 197 +++A Sbjct: 949 ASQVVSA 955 >gi|299538009|ref|ZP_07051295.1| ATP-dependent helicase [Lysinibacillus fusiformis ZC1] gi|298726591|gb|EFI67180.1| ATP-dependent helicase [Lysinibacillus fusiformis ZC1] Length = 921 Score = 112 bits (280), Expect = 3e-23, Method: Composition-based stats. Identities = 38/189 (20%), Positives = 67/189 (35%), Gaps = 23/189 (12%) Query: 26 ASKTVKCLQLANG-AVYYDEEKHWKEVHDEKIKALEVIIEKA-----NAAPIIVAYHFNS 79 K QL N A+Y E E + LE I++ A N ++ + Sbjct: 719 LKMLSKLKQLCNHPALYLKEPFEDAETMLARSTKLERIVQMAAEIVDNGEQCLIFTQYIG 778 Query: 80 DLARLQKAFPQ-----------GRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYG 128 LQ F + + ++ + G P+ + G GLNL Sbjct: 779 MGQLLQHCFSEIYNVDAPFLTGAMPKQQRDRLVEAFQAGDFPIFILSLKAGGTGLNLT-A 837 Query: 129 GNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKS 188 N ++ WW+ Q +R + G + V V+ + TI+E + + L KS Sbjct: 838 ANHVLHADRWWNPAVENQATDR-----AYRIGQTQFVQVHKFVTIGTIEEKIDKMLVQKS 892 Query: 189 TIQDLLLNA 197 + + L+ + Sbjct: 893 ALSEELIQS 901 >gi|150864264|ref|XP_001383014.2| DNA ATP-dependent helicase [Scheffersomyces stipitis CBS 6054] gi|149385520|gb|ABN64985.2| DNA ATP-dependent helicase [Scheffersomyces stipitis CBS 6054] Length = 1269 Score = 112 bits (280), Expect = 3e-23, Method: Composition-based stats. Identities = 27/156 (17%), Positives = 64/156 (41%), Gaps = 19/156 (12%) Query: 55 KIKALEVIIEKA--NAAPIIVAYHFNSDLARLQK----------AFPQGRTLDKDPCTIQ 102 K+ L+ ++ + N +++ + + +++ LD + Sbjct: 1033 KLAKLDELLVELKQNDHRVLIYFQMTRMMDLMEEYLTYRQHKYIRLDGSSKLDDRRDLVH 1092 Query: 103 EWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGF 161 +W + +I + + G G+NL + ++F+ W+ Q ++R + G Sbjct: 1093 DWQTKPEIFIFLLSTRAGGLGINLT-AADTVIFYDSDWNPTIDSQAMDR-----AHRLGQ 1146 Query: 162 KRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 R V VY L+ + TI+E + R + K +Q +++ Sbjct: 1147 TRQVTVYRLLTRGTIEERMRDRAKQKEQVQQVVMEG 1182 >gi|308178507|ref|YP_003917913.1| putative ATP-dependent helicase [Arthrobacter arilaitensis Re117] gi|307745970|emb|CBT76942.1| putative ATP-dependent helicase [Arthrobacter arilaitensis Re117] Length = 1049 Score = 112 bits (280), Expect = 3e-23, Method: Composition-based stats. Identities = 34/184 (18%), Positives = 64/184 (34%), Gaps = 20/184 (10%) Query: 26 ASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLAR 83 + K Q+ N + K+ LE ++E+ A ++ + Sbjct: 844 LAAMAKLKQVCNHPAQLLHDGSTVAGRSGKVARLEELLEQIVAEGDKVLCFTQYTEFAQM 903 Query: 84 LQKAFP-----------QGRTLDKDPCTIQEWNEGKIP-LLFAHPASCGHGLNLQYGGNI 131 L G + K +Q + P + + G GLNL N Sbjct: 904 LLPHLASRLDAEVFYLHGGTSRAKRTELVQRFQATDRPAIFLLSLKAGGTGLNLT-AANH 962 Query: 132 LVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQ 191 ++ WW+ Q +R + G KR V V I + T++E + + ++ K + Sbjct: 963 VLHLDRWWNPAVENQATDR-----AFRIGQKRNVQVRKFICRGTLEERIDEMIKDKQALA 1017 Query: 192 DLLL 195 DL++ Sbjct: 1018 DLVV 1021 >gi|302655807|ref|XP_003019687.1| hypothetical protein TRV_06277 [Trichophyton verrucosum HKI 0517] gi|291183425|gb|EFE39042.1| hypothetical protein TRV_06277 [Trichophyton verrucosum HKI 0517] Length = 629 Score = 112 bits (280), Expect = 3e-23, Method: Composition-based stats. Identities = 41/181 (22%), Positives = 71/181 (39%), Gaps = 18/181 (9%) Query: 36 ANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDL---ARLQKAFPQGR 92 +NG E K W + + I + I++ ++ L RL +A G Sbjct: 367 SNGRRGDREVKTWYSGKMMVLDRMLARIRQDTNDKIVLISNYTQTLDLFERLCRARAYGC 426 Query: 93 TL-------DKDPCTIQEWN--EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEE 143 K + ++N G+ + + G G+NL G N LV F W+ Sbjct: 427 IRLDGTMGVKKRSKLVDKFNDPNGEEFVFLLSSKAGGCGINL-VGANRLVLFDPDWNPAA 485 Query: 144 HQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETI 203 QQ + R+ + G + FVY IA TI+E + QR K ++ ++++ + Sbjct: 486 DQQALARVW-----RDGQSKDCFVYRFIATGTIEEKIFQRQSHKQSLSSCVVDSAEDVER 540 Query: 204 H 204 H Sbjct: 541 H 541 >gi|223933727|ref|ZP_03625701.1| Non-specific serine/threonine protein kinase [Streptococcus suis 89/1591] gi|223897608|gb|EEF63995.1| Non-specific serine/threonine protein kinase [Streptococcus suis 89/1591] Length = 1030 Score = 112 bits (280), Expect = 3e-23, Method: Composition-based stats. Identities = 27/141 (19%), Positives = 52/141 (36%), Gaps = 16/141 (11%) Query: 67 NAAPIIVAYHFNSDLARLQKAFPQ----------GRTLDKDPCTIQEWNEGKIPLLFAHP 116 +++ F + L ++++ + ++ Q +N G Sbjct: 877 GEHRVLIFSQFRNMLEKIEEQLVEIGMTSYTLTGSTPANQRQEMTQAFNAGSRDAFLISL 936 Query: 117 ASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTI 176 + G GLNL G + ++ LWW+ Q I R + G V Y LI + TI Sbjct: 937 KAGGVGLNLT-GADTVILVDLWWNPAVEAQAISR-----AHRMGQTEKVECYRLITRGTI 990 Query: 177 DELVLQRLRTKSTIQDLLLNA 197 +E + + K + +L+ Sbjct: 991 EEKIQELQENKKNLVKTVLDG 1011 >gi|302024348|ref|ZP_07249559.1| SNF2 family DNA/RNA helicase [Streptococcus suis 05HAS68] gi|330833343|ref|YP_004402168.1| Non-specific serine/threonine protein kinase [Streptococcus suis ST3] gi|329307566|gb|AEB81982.1| Non-specific serine/threonine protein kinase [Streptococcus suis ST3] Length = 1030 Score = 112 bits (280), Expect = 3e-23, Method: Composition-based stats. Identities = 27/141 (19%), Positives = 52/141 (36%), Gaps = 16/141 (11%) Query: 67 NAAPIIVAYHFNSDLARLQKAFPQ----------GRTLDKDPCTIQEWNEGKIPLLFAHP 116 +++ F + L ++++ + ++ Q +N G Sbjct: 877 GEHRVLIFSQFRNMLEKIEEQLVEIGMTSYTLTGSTPANQRQEMTQAFNAGSRDAFLISL 936 Query: 117 ASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTI 176 + G GLNL G + ++ LWW+ Q I R + G V Y LI + TI Sbjct: 937 KAGGVGLNLT-GADTVILVDLWWNPAVEAQAISR-----AHRMGQTEKVECYRLITRGTI 990 Query: 177 DELVLQRLRTKSTIQDLLLNA 197 +E + + K + +L+ Sbjct: 991 EEKIQELQENKKNLVKTVLDG 1011 >gi|302504353|ref|XP_003014135.1| hypothetical protein ARB_07440 [Arthroderma benhamiae CBS 112371] gi|291177703|gb|EFE33495.1| hypothetical protein ARB_07440 [Arthroderma benhamiae CBS 112371] Length = 790 Score = 112 bits (280), Expect = 3e-23, Method: Composition-based stats. Identities = 41/181 (22%), Positives = 71/181 (39%), Gaps = 18/181 (9%) Query: 36 ANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDL---ARLQKAFPQGR 92 +NG E K W + + I + I++ ++ L RL +A G Sbjct: 528 SNGRRGDREVKTWYSGKMMVLDRMLARIRQDTNDKIVLISNYTQTLDLFERLCRARAYGC 587 Query: 93 TL-------DKDPCTIQEWN--EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEE 143 K + ++N G+ + + G G+NL G N LV F W+ Sbjct: 588 IRLDGTMGVKKRSKLVDKFNDPNGEEFVFLLSSKAGGCGINL-VGANRLVLFDPDWNPAA 646 Query: 144 HQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETI 203 QQ + R+ + G + FVY IA TI+E + QR K ++ ++++ + Sbjct: 647 DQQALARVW-----RDGQSKDCFVYRFIATGTIEEKIFQRQSHKQSLSSCVVDSAEDVER 701 Query: 204 H 204 H Sbjct: 702 H 702 >gi|46446009|ref|YP_007374.1| swi/snf helicase family protein [Candidatus Protochlamydia amoebophila UWE25] gi|46399650|emb|CAF23099.1| putative rapA, a bacterial member of the swi/snf helicase family [Candidatus Protochlamydia amoebophila UWE25] Length = 893 Score = 112 bits (280), Expect = 3e-23, Method: Composition-based stats. Identities = 35/214 (16%), Positives = 79/214 (36%), Gaps = 25/214 (11%) Query: 2 KQYHKF----QRELYCDLQGENIEA--FNSASKTVKCLQLANGAVYYDE--EKHWKEVHD 53 + Y +F +R L+ ++ E I ++ Q+ + E+ + Sbjct: 668 QHYEQFLANFKRNLFKKIEAEGITKHRLEVLEAILRLRQICCHPLLVSSIIEEKEDLITS 727 Query: 54 EKIKALEVIIE--KANAAPIIVAYHFNSDLARLQK---------AFPQGRTLDKDPCTIQ 102 K L ++ + ++V F S L + + A+ G T +++ + Sbjct: 728 AKFDLLMQDLQTIREEGRKVLVYSQFTSMLKLMTRYANQQGWTYAYLDGSTQNREKVVTE 787 Query: 103 EWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFK 162 + + F + G GLNL + ++ + WW+ +Q I R + G + Sbjct: 788 FQENLEQSIFFISLKAGGVGLNLT-AADYVILYDPWWNEAVEEQAINR-----AHRIGRQ 841 Query: 163 RAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 V + +I+E +++ K T+ D + + Sbjct: 842 EQVIAKRFVVIESIEEKMMKLKAAKRTLVDDIFD 875 >gi|30694618|ref|NP_191289.2| INO80 (INO80 ORTHOLOG); ATP binding / DNA binding / helicase/ nucleic acid binding [Arabidopsis thaliana] gi|238065083|sp|Q8RXS6|INO80_ARATH RecName: Full=DNA helicase INO80 complex homolog 1; Short=AtINO80 Length = 1507 Score = 112 bits (280), Expect = 3e-23, Method: Composition-based stats. Identities = 29/160 (18%), Positives = 66/160 (41%), Gaps = 19/160 (11%) Query: 51 VHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAF----------PQGRTLDKDP 98 K++ L++++++ A +++ L L+ T+ Sbjct: 1203 TDSGKLQTLDILLKRLRAGNHRVLLFAQMTKMLNILEDYMNYRKYKYLRLDGSSTIMDRR 1262 Query: 99 CTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 ++++ I + + G G+NL + ++F+ W+ Q ++R Sbjct: 1263 DMVRDFQHRSDIFVFLLSTRAGGLGINLT-AADTVIFYESDWNPTLDLQAMDR-----AH 1316 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + G + V VY LI + T++E +L R K+T+Q L++ Sbjct: 1317 RLGQTKDVTVYRLICKETVEEKILHRASQKNTVQQLVMTG 1356 >gi|196014691|ref|XP_002117204.1| hypothetical protein TRIADDRAFT_61248 [Trichoplax adhaerens] gi|190580169|gb|EDV20254.1| hypothetical protein TRIADDRAFT_61248 [Trichoplax adhaerens] Length = 1395 Score = 112 bits (280), Expect = 4e-23, Method: Composition-based stats. Identities = 32/175 (18%), Positives = 69/175 (39%), Gaps = 20/175 (11%) Query: 37 NGAVYYD-EEKHWKEVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQKAF----- 88 NG Y +K K++ L+V+++K +++ + L++ Sbjct: 1018 NGWSYMAIPDKKSLVTDSGKLRILDVLLKKLKFEGHRVLIYSQMTRMIDLLEEYMGFRKH 1077 Query: 89 -----PQGRTLDKDPCTIQEWNEG-KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLE 142 + + ++ I + G G+NL + ++F+ W+ Sbjct: 1078 IYMRLDGSSKISDRRDMVADFQSKSDIFAFLLSTRAGGLGINLT-AADTVIFYDSDWNPT 1136 Query: 143 EHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 QQ ++R + G + V VY L+ TI+ +L+R + KS IQ ++++ Sbjct: 1137 VDQQAMDR-----AHRLGQTKQVTVYRLVTSGTIENRILKRAQEKSEIQKMVISG 1186 >gi|331000570|ref|ZP_08324240.1| helicase protein [Parasutterella excrementihominis YIT 11859] gi|329571277|gb|EGG52970.1| helicase protein [Parasutterella excrementihominis YIT 11859] Length = 133 Score = 112 bits (280), Expect = 4e-23, Method: Composition-based stats. Identities = 29/119 (24%), Positives = 54/119 (45%), Gaps = 7/119 (5%) Query: 80 DLARLQKAFPQGRT-LDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLW 138 D A ++ + G + ++ + G +PL + G GLNL + ++ W Sbjct: 2 DKAGIEYLYLDGSVPAAQRKKLVETFQNGDMPLFLISLKAGGTGLNLT-AADYVIHLDPW 60 Query: 139 WDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 W+ Q +R + G KR V +Y LI++ T+++ +L+ +TK + D LL Sbjct: 61 WNPAVEDQASDR-----AYRIGQKRPVTIYKLISEKTVEQKILELHKTKKNLADALLEG 114 >gi|58697007|ref|ZP_00372482.1| helicase, SNF2 family [Wolbachia endosymbiont of Drosophila simulans] gi|58536740|gb|EAL60000.1| helicase, SNF2 family [Wolbachia endosymbiont of Drosophila simulans] Length = 773 Score = 112 bits (280), Expect = 4e-23, Method: Composition-based stats. Identities = 31/185 (16%), Positives = 70/185 (37%), Gaps = 20/185 (10%) Query: 27 SKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANA--APIIVAYHFNSDLARL 84 Q+ N + ++K K++ LE I+ ++ + + Sbjct: 572 KLINALKQICNHPSQFGKKKRASIEQSGKMQMLEEILISIGEVAEKSLIFTQYTEMGEII 631 Query: 85 QKAFPQ-----------GRTLDKDPCTIQEWNE-GKIPLLFAHPASCGHGLNLQYGGNIL 132 + + G + I ++ + +L + G GLNL N + Sbjct: 632 ARLLEERFESEVPFLHGGLSRKARDTMINDFQNLFQSNILIVSLKAGGTGLNLT-AANHV 690 Query: 133 VFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQD 192 + + LWW+ Q +R + G +R V VY L++ T +E + + +++K + + Sbjct: 691 IHYDLWWNPAVEAQATDR-----AYRIGQERNVMVYRLLSTGTFEERIDEMIQSKKELAN 745 Query: 193 LLLNA 197 L +++ Sbjct: 746 LTISS 750 >gi|300868337|ref|ZP_07112963.1| conserved hypothetical protein [Oscillatoria sp. PCC 6506] gi|300333630|emb|CBN58149.1| conserved hypothetical protein [Oscillatoria sp. PCC 6506] Length = 1109 Score = 112 bits (280), Expect = 4e-23, Method: Composition-based stats. Identities = 35/217 (16%), Positives = 78/217 (35%), Gaps = 28/217 (12%) Query: 3 QYHKFQRELYCDLQGENIEAFNS--ASKTVKCLQLANGAVYYDEEKHWKEVH-----DEK 55 Y K E ++ + + VK Q+ N + EE K++ K Sbjct: 869 IYQKVVEESLAAIESADGIQRRGMILALLVKLKQICNYPILSKEEGKSKKLEINSQESGK 928 Query: 56 IKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQ--GRTL---------DKDPCTIQ 102 ++ L+ ++E+ + ++ F L+ + GR + + I Sbjct: 929 LQRLDEMLEEVLSAEDRALIFTQFAEWGHLLKAHLEKHLGREILFLYGGTRQQQREEMID 988 Query: 103 EWNEGKI--PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 + P++ + G GLNL + + + WW+ Q +R+ + G Sbjct: 989 RFQHDPQGPPIMILSLKAGGTGLNLTRATH-VFHYDRWWNPAVENQATDRVF-----RIG 1042 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 R V V+ + T++E + + +K + + ++ Sbjct: 1043 QTRNVQVHKFVCTGTLEEKIHDMIESKKALAEQVVGG 1079 >gi|260818894|ref|XP_002604617.1| hypothetical protein BRAFLDRAFT_126777 [Branchiostoma floridae] gi|229289945|gb|EEN60628.1| hypothetical protein BRAFLDRAFT_126777 [Branchiostoma floridae] Length = 1277 Score = 111 bits (279), Expect = 4e-23, Method: Composition-based stats. Identities = 32/180 (17%), Positives = 69/180 (38%), Gaps = 20/180 (11%) Query: 32 CLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFP 89 Q+ N + + + K+K L +++ +++ + + + + Sbjct: 1084 LKQICNHPANFTKNSNRDIQASGKMKVLIDLLQPILQQGEKVLIFSQYVQMIKLMAQMVE 1143 Query: 90 ---QGRTL---------DKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSL 137 + + L +D T + ++ + G GLNL N ++ + L Sbjct: 1144 AHFKVKPLIFEGSMSQQKRDEATTAFQTQPHRQIMIVSLQAGGVGLNLT-AANHVIHYDL 1202 Query: 138 WWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 W++ + Q +R + G + VFVY I++NT +E + L K + DL + A Sbjct: 1203 WFNPAKENQATDR-----AFRIGQTKTVFVYRFISENTFEEKINVMLEKKKDLSDLSVQA 1257 >gi|260943410|ref|XP_002616003.1| hypothetical protein CLUG_03244 [Clavispora lusitaniae ATCC 42720] gi|238849652|gb|EEQ39116.1| hypothetical protein CLUG_03244 [Clavispora lusitaniae ATCC 42720] Length = 879 Score = 111 bits (279), Expect = 4e-23, Method: Composition-based stats. Identities = 37/169 (21%), Positives = 66/169 (39%), Gaps = 23/169 (13%) Query: 45 EKHWKEVHDEKIKALE----VIIEKANAAPIIVAYHFNSDLARLQK----------AFPQ 90 + + K LE I + N I+V ++ L ++K Sbjct: 627 GREIQTWFSAKFSILERFLHQIRTQTNDK-IVVISNYTRTLDLIEKMCRYKRYGSLRLDG 685 Query: 91 GRTLDKDPCTIQEWN--EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMI 148 T++K + +N EG + + G G+NL G N LV W+ QQ + Sbjct: 686 TMTINKRQKIVDRFNDPEGNEFIFLLSSKAGGCGINL-IGANRLVLMDPDWNPAADQQAL 744 Query: 149 ERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 R+ + G K+ F+Y + TI+E + QR K ++ +++A Sbjct: 745 ARVW-----RDGQKKDCFIYRFMCTGTIEEKIFQRQSMKLSLSSCVVDA 788 >gi|167517042|ref|XP_001742862.1| hypothetical protein [Monosiga brevicollis MX1] gi|163779486|gb|EDQ93100.1| predicted protein [Monosiga brevicollis MX1] Length = 470 Score = 111 bits (279), Expect = 4e-23, Method: Composition-based stats. Identities = 27/157 (17%), Positives = 64/157 (40%), Gaps = 19/157 (12%) Query: 54 EKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQK----------AFPQGRTLDKDPCTI 101 K++ L+ ++ + A +++ + L++ + + + Sbjct: 319 AKLQVLDDMLRRLKAGGHRVLIYSQMTKMIDLLEEFLTHRQYKYVRLDGSSKISERRDMV 378 Query: 102 QEWNE-GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 ++ I + G G+NL + ++F+ W+ QQ ++R + G Sbjct: 379 ADFQSRDDIFAFILSTRAGGIGINLT-AADTVIFYDSDWNPTVDQQAMDR-----AHRLG 432 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 R V VY LI +N+++E +L R + KS + +++ Sbjct: 433 QTRTVTVYRLITRNSVEERILARAQEKSKVHQMVIQG 469 >gi|84619206|emb|CAJ42330.1| SNF2 related domain [Streptomyces steffisburgensis] Length = 618 Score = 111 bits (279), Expect = 4e-23, Method: Composition-based stats. Identities = 41/211 (19%), Positives = 75/211 (35%), Gaps = 23/211 (10%) Query: 1 MKQYHKFQRELYCDLQGENIEAFN-SASKTVKCLQLANGAVYY----DEEKHWKEVHDEK 55 ++ Y + + + G IE + Q+ N Y D Sbjct: 386 VRLYREAVDRAFDEGLGGGIERRGRVLALLTSLKQICNHPAQYLREEAAGTGRSGKFDRA 445 Query: 56 IKALEVIIEKANAAPIIVAYHFNSDL--ARLQKAFPQGRTL--------DKDPCTIQEWN 105 + L I++ + A + Y DL L + G DK + ++ Sbjct: 446 AEMLAEIVDDGDRALVFTQYRVMGDLLAGHLSQHLGTGPIPFLHGGLSPDKRDRLVHDFQ 505 Query: 106 EGKI--PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKR 163 E P+L + G GLNL N ++ + WW+ +Q +R + G +R Sbjct: 506 ESDDAPPVLLLSLRAAGFGLNLTR-ANHVMHYDRWWNPAVEEQATDR-----AHRIGQQR 559 Query: 164 AVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 + V+ L+ TI++ + Q TK D++ Sbjct: 560 TLNVHALVTGGTIEDHIAQMHETKRGFADVV 590 >gi|327441412|dbj|BAK17777.1| superfamily II DNA/RNA helicase, SNF2 family [Solibacillus silvestris StLB046] Length = 925 Score = 111 bits (279), Expect = 4e-23, Method: Composition-based stats. Identities = 35/219 (15%), Positives = 73/219 (33%), Gaps = 29/219 (13%) Query: 2 KQYHKFQRELYCDLQG--ENIEAFNSASKTVKCLQLANGAV------YYDEEKHWKEVHD 53 Y + ++ L+ + K QL N + D Sbjct: 693 AHYEGYIQDTLATLEELTGFEKKGRILKMLNKLKQLCNHPALFLKEPFEDANTMVSRSVK 752 Query: 54 EK--IKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQ-----------GRTLDKDPCT 100 K I+ + II+ N ++ + +Q + ++ Sbjct: 753 LKRIIEMTKEIID--NGEQCLIFTQYIGMGNLIQHCLTELYNVEVPFLTGSMPKNQRDNL 810 Query: 101 IQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 + ++ G+ P+ + G GLNL ++L WW+ Q +R + G Sbjct: 811 VDQFQAGEFPVFLLSLKAGGTGLNLTAATHVL-HADRWWNPAVENQATDR-----AYRIG 864 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 + V V+ + TI+E + + + KS + + L+ + K Sbjct: 865 QTQFVQVHKFVTIGTIEEKIDKMIAMKSALSEELIQSSK 903 >gi|315053993|ref|XP_003176371.1| DNA repair and recombination protein RAD54 [Arthroderma gypseum CBS 118893] gi|311338217|gb|EFQ97419.1| DNA repair and recombination protein RAD54 [Arthroderma gypseum CBS 118893] Length = 831 Score = 111 bits (279), Expect = 4e-23, Method: Composition-based stats. Identities = 41/181 (22%), Positives = 71/181 (39%), Gaps = 18/181 (9%) Query: 36 ANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDL---ARLQKAFPQGR 92 +NG E K W + + I + I++ ++ L RL +A G Sbjct: 569 SNGRRGDREVKSWYSGKMMVLDRMLARIRQDTNDKIVLISNYTQTLDLFERLCRARAYGC 628 Query: 93 TL-------DKDPCTIQEWN--EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEE 143 K + ++N G+ + + G G+NL G N LV F W+ Sbjct: 629 IRLDGTMGVKKRSKLVDKFNDPNGEEFVFLLSSKAGGCGINL-VGANRLVLFDPDWNPAA 687 Query: 144 HQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETI 203 QQ + R+ + G + FVY IA TI+E + QR K ++ ++++ + Sbjct: 688 DQQALARVW-----RDGQSKDCFVYRFIATGTIEEKIFQRQSHKQSLSSCVVDSAEDVER 742 Query: 204 H 204 H Sbjct: 743 H 743 >gi|297817054|ref|XP_002876410.1| hypothetical protein ARALYDRAFT_907192 [Arabidopsis lyrata subsp. lyrata] gi|297322248|gb|EFH52669.1| hypothetical protein ARALYDRAFT_907192 [Arabidopsis lyrata subsp. lyrata] Length = 1507 Score = 111 bits (279), Expect = 4e-23, Method: Composition-based stats. Identities = 29/160 (18%), Positives = 66/160 (41%), Gaps = 19/160 (11%) Query: 51 VHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAF----------PQGRTLDKDP 98 K++ L++++++ A +++ L L+ T+ Sbjct: 1203 TDSGKLQTLDILLKRLRAGNHRVLLFAQMTKMLNILEDYMNYRKYKYLRLDGSSTIMDRR 1262 Query: 99 CTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 ++++ I + + G G+NL + ++F+ W+ Q ++R Sbjct: 1263 DMVRDFQHRSDIFVFLLSTRAGGLGINLT-AADTVIFYESDWNPTLDLQAMDR-----AH 1316 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + G + V VY LI + T++E +L R K+T+Q L++ Sbjct: 1317 RLGQTKDVTVYRLICKETVEEKILHRASQKNTVQQLVMTG 1356 >gi|255931991|ref|XP_002557552.1| Pc12g07170 [Penicillium chrysogenum Wisconsin 54-1255] gi|211582171|emb|CAP80344.1| Pc12g07170 [Penicillium chrysogenum Wisconsin 54-1255] Length = 1665 Score = 111 bits (279), Expect = 4e-23, Method: Composition-based stats. Identities = 27/161 (16%), Positives = 62/161 (38%), Gaps = 19/161 (11%) Query: 50 EVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQKAF---------PQGRTL--DK 96 K+ L+ ++ + +++ + + +++ G T D+ Sbjct: 1375 VTDSGKLAKLDQLLRELKPGGHRVLLYFQMTRMIDLMEEYLTYRNYKYCRLDGSTKLEDR 1434 Query: 97 DPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 + +I + + G G+NL + ++F+ W+ Q ++R Sbjct: 1435 RDTVSDFQSNPEIFVFLLSTRAGGLGINLT-AADTVIFYDSDWNPTIDSQAMDR-----A 1488 Query: 157 RQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + G R V VY LI + TI+E + +R K +Q +++ Sbjct: 1489 HRLGQTRQVTVYRLITRGTIEERIRKRALQKEEVQRVVITG 1529 >gi|319950443|ref|ZP_08024358.1| helicase [Dietzia cinnamea P4] gi|319435907|gb|EFV91112.1| helicase [Dietzia cinnamea P4] Length = 935 Score = 111 bits (279), Expect = 4e-23, Method: Composition-based stats. Identities = 36/213 (16%), Positives = 75/213 (35%), Gaps = 26/213 (12%) Query: 3 QYHKFQRELYCDLQGENIEAFNSASKTV--KCLQLANG-AVYYDEEKHWKEVH---DEKI 56 Y ++ ++ A A + Q+ N A Y + K+ Sbjct: 700 LYQAVVEDMMEQVKESEGTARKGAILSGLTALKQVCNHPAHYLGDGSALLRGGRHRSGKL 759 Query: 57 KALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQ-----------GRTLDKDPCTIQE 103 AL+ ++ + +++ + + + + G T ++E Sbjct: 760 AALDEVLTEILDAGEKVLLFTQYRAFGDLILPLLERRAASSVPFLHGGVTAAGRAQMVEE 819 Query: 104 WNEGK-IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFK 162 + + P++ A + G GL L N +V WW+ Q +R+ + G Sbjct: 820 FQSTQGPPVMLASLRAGGTGLTLTE-ANHVVHLDRWWNPAVENQATDRV-----HRIGQT 873 Query: 163 RAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 R V V L+A T+++ + + L K + +L L Sbjct: 874 RRVQVRTLVAPGTVEDRIDELLEAKRDLAELTL 906 >gi|242021397|ref|XP_002431131.1| conserved hypothetical protein [Pediculus humanus corporis] gi|212516380|gb|EEB18393.1| conserved hypothetical protein [Pediculus humanus corporis] Length = 745 Score = 111 bits (279), Expect = 4e-23, Method: Composition-based stats. Identities = 33/162 (20%), Positives = 65/162 (40%), Gaps = 18/162 (11%) Query: 55 KIKALEVIIEKANAAPIIVAYHFNSDLARLQK----------AFPQGRTLDKDPCTIQEW 104 + L +I+ I++ ++ L +K T+ K ++++ Sbjct: 501 FLDTLLALIKATTNDKIVLVSNYTQTLDLFEKLSRFRNYQYVRLDGSMTIKKRGKVVEKF 560 Query: 105 NEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFK 162 N+ + + + G GLNL G N LV F W+ Q + R+ + G K Sbjct: 561 NDPESKDFIFMLSSKAGGCGLNL-IGANRLVMFDPDWNPANDDQAMARVW-----RDGQK 614 Query: 163 RAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIH 204 + F+Y L++ TI+E + QR K + +++ + H Sbjct: 615 KPCFIYRLLSTGTIEEKIFQRQAHKKALSSTVVDNEEDVARH 656 >gi|121700154|ref|XP_001268342.1| SNF2 family N-terminal domain protein [Aspergillus clavatus NRRL 1] gi|119396484|gb|EAW06916.1| SNF2 family N-terminal domain protein [Aspergillus clavatus NRRL 1] Length = 682 Score = 111 bits (279), Expect = 5e-23, Method: Composition-based stats. Identities = 37/173 (21%), Positives = 69/173 (39%), Gaps = 18/173 (10%) Query: 44 EEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQK----------AFPQGRT 93 + K W + + I + I++ ++ L +K T Sbjct: 428 DIKSWYSGKMMVLDRMLARIRQDTNDKIVLISNYTQTLDLFEKLCRSRGYGSLRLDGTMT 487 Query: 94 LDKDPCTIQEWN--EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERI 151 ++K + ++N G+ + + G GLNL G N LV F W+ QQ + R+ Sbjct: 488 VNKRQKLVDKFNDPNGEEFVFLLSSKAGGCGLNL-IGANRLVLFDPDWNPAADQQALARV 546 Query: 152 GVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIH 204 + G K+ FVY IA +I+E + QR K ++ ++++ + H Sbjct: 547 W-----RDGQKKDCFVYRFIATGSIEEKIFQRQSHKQSLSSCVVDSAEDVERH 594 >gi|282890006|ref|ZP_06298540.1| hypothetical protein pah_c009o020 [Parachlamydia acanthamoebae str. Hall's coccus] gi|281500098|gb|EFB42383.1| hypothetical protein pah_c009o020 [Parachlamydia acanthamoebae str. Hall's coccus] Length = 1234 Score = 111 bits (279), Expect = 5e-23, Method: Composition-based stats. Identities = 31/205 (15%), Positives = 79/205 (38%), Gaps = 21/205 (10%) Query: 6 KFQRELYCDLQGENIEA---FNSASKTVKCLQLANG-AVYYDEEKHWKEVHDEKIKALEV 61 + RE + + A + + Q+ N A + + +++ K + Sbjct: 1010 ERSREKILQVLHDRTIAIPYMHIFALLSSLKQICNHPAAFLKTPEEYQDYSSGKWDLFKE 1069 Query: 62 IIEKANA--APIIVAYHFNSDLAR---------LQKAFPQGRTLDKDPCTIQEWNEGKIP 110 ++++A ++V + L ++ A +G T+D+ + + Sbjct: 1070 LLDEARESSQKVVVFSQYLGMLDIFELYLQQNGIEYATIRGSTVDRRAPIKRFNQDPNCE 1129 Query: 111 LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYL 170 + + G G++L ++++ + WW+ Q +R+ + G R V V+ L Sbjct: 1130 IFVGSLRAAGLGIDLT-AASVVIHYDRWWNAARENQATDRV-----HRMGQTRGVQVFKL 1183 Query: 171 IAQNTIDELVLQRLRTKSTIQDLLL 195 + TI+E + Q + K + + ++ Sbjct: 1184 VTLGTIEERIDQLISQKGQLLEDVV 1208 >gi|17231890|ref|NP_488438.1| hypothetical protein alr4398 [Nostoc sp. PCC 7120] gi|17133534|dbj|BAB76097.1| alr4398 [Nostoc sp. PCC 7120] Length = 1075 Score = 111 bits (279), Expect = 5e-23, Method: Composition-based stats. Identities = 36/221 (16%), Positives = 76/221 (34%), Gaps = 31/221 (14%) Query: 2 KQYHKFQRELYCDLQGENIEAFNS--ASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKAL 59 Y K +++ + +K Q+ N Y + ++ K++ L Sbjct: 831 ALYQKAVETSLAEIESAEGLQRRGMILALLIKLKQICNHPAQYLKINTLEQHSSGKLQRL 890 Query: 60 EVIIEK----------ANAAPIIVAYHFNSDLARLQKAFPQ-----------GRTLDKDP 98 E ++E+ A A ++ F L+ + G + + Sbjct: 891 EEMLEEVLAESNTYGVAGAGRALIFTQFAEWGKLLKPHLEKQLGREIFFLYGGTSKKQRE 950 Query: 99 CTIQEWNEGKI--PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 I + P++ + G GLNL N + F WW+ Q +R+ Sbjct: 951 EMIDRFQHDPQGPPIMILSLKAGGVGLNLTR-ANHVFHFDRWWNPAVENQATDRVF---- 1005 Query: 157 RQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + G R V V+ + T++E + + +K + + ++ A Sbjct: 1006 -RIGQTRNVQVHKFVCNGTLEEKIHDMIESKKQLAEQVVGA 1045 >gi|67924074|ref|ZP_00517522.1| SNF2-related:Helicase, C-terminal [Crocosphaera watsonii WH 8501] gi|67854073|gb|EAM49384.1| SNF2-related:Helicase, C-terminal [Crocosphaera watsonii WH 8501] Length = 1045 Score = 111 bits (279), Expect = 5e-23, Method: Composition-based stats. Identities = 33/211 (15%), Positives = 71/211 (33%), Gaps = 24/211 (11%) Query: 3 QYHKFQRELYCDLQGENIEAFNSASKT--VKCLQLANGA-VYYDEEKHWKEVHDEKIKAL 59 Y +++ L+ + ++ Q+ N + + + K++ L Sbjct: 814 LYEAVVKDVLEKLEDTEGIQRKGLILSTLLRLKQICNHPRQFLQDNSDFIPNRSHKLERL 873 Query: 60 EVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQ-----------GRTLDKDPCTIQEWNE 106 ++E+ A ++ F L+ Q G K I ++ + Sbjct: 874 GEMLEEVIAEGDSFLIFTQFTEIGEALKTYLKQTLYYNTYYIHGGTNRQKRQQMITQFQD 933 Query: 107 GKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA 164 P + G G+ L N + F WW+ +Q +R + G K+ Sbjct: 934 QDTPPSAFILSLKAGGVGITLTK-ANHVFHFDRWWNPAVEEQATDR-----AFRIGQKKN 987 Query: 165 VFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 VFV+ + TI+E + + K + ++ Sbjct: 988 VFVHKFVTLGTIEERIDVMIEDKKKMASAIV 1018 >gi|225593133|gb|ACN96051.1| SNF2-related helicase [Fischerella sp. MV11] Length = 828 Score = 111 bits (279), Expect = 5e-23, Method: Composition-based stats. Identities = 39/213 (18%), Positives = 76/213 (35%), Gaps = 24/213 (11%) Query: 3 QYHKFQRELYCDLQGENIEAFNS--ASKTVKCLQLANGAVYYDEEKHWKEVH-DEKIKAL 59 Y K E +++ + VK Q+ N Y ++ E H K+ L Sbjct: 592 LYQKVVEESLAEIETAEGMQRRGMILALLVKLKQVCNHPAQYLKKTTLSEPHLSGKLLRL 651 Query: 60 EVIIEK--ANAAPIIVAYHF-------NSDLARLQKA---FPQGRT-LDKDPCTIQEWNE 106 + ++E+ + ++ F L + F G T + I + Sbjct: 652 QEMLEEVLSEGDRALIFTQFAEWGKLLKPYLEQKLGREIFFLYGSTSKKQREEMIDRFQH 711 Query: 107 GKI--PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA 164 P++ + G GLNL N + F WW+ Q +R+ + G R Sbjct: 712 DPQGPPIMILSLKAGGVGLNLTR-ANHVFHFDRWWNPAVENQATDRVF-----RIGQTRN 765 Query: 165 VFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 V V+ + T++E + + +K + + ++ A Sbjct: 766 VQVHKFVCTGTLEEKIHDMIESKKQLAEQVVGA 798 >gi|300781455|ref|ZP_07091309.1| chromodomain helicase [Corynebacterium genitalium ATCC 33030] gi|300533162|gb|EFK54223.1| chromodomain helicase [Corynebacterium genitalium ATCC 33030] Length = 1006 Score = 111 bits (279), Expect = 5e-23, Method: Composition-based stats. Identities = 33/214 (15%), Positives = 73/214 (34%), Gaps = 26/214 (12%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTV--KCLQLANGAVYYDEEKHWKEVH----DEK 55 Y + +L+ A + + Q+ N +Y + K Sbjct: 772 ALYTALVNAMQKELESRTGMARKGLVLSTITRIKQICNHPAHYQADGSPVTDKGKHRSGK 831 Query: 56 IKALEVIIEKA--NAAPIIVAYHFNSDLARLQKAFPQ-----------GRTLDKDPCTIQ 102 + L ++++A ++V + + LQ G + + ++ Sbjct: 832 VAMLMELLDQAIETDQRVLVFTQYKAFGDILQPYLSDRLGHEIPFLHGGLSKTQRDTMVE 891 Query: 103 EWNEGKIP-LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGF 161 + + P + + G GLNL ++++ WW+ Q +R + G Sbjct: 892 RFQDPNGPRAMILSLRAGGTGLNLT-AASMVIHMDRWWNPAVENQATDR-----AYRIGQ 945 Query: 162 KRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 R V VY +I + T++E + L K + ++ Sbjct: 946 NRNVQVYKMITRGTMEESIQDILDGKLKLAGAVV 979 >gi|241640781|ref|XP_002410926.1| conserved hypothetical protein [Ixodes scapularis] gi|215503624|gb|EEC13118.1| conserved hypothetical protein [Ixodes scapularis] Length = 654 Score = 111 bits (278), Expect = 5e-23, Method: Composition-based stats. Identities = 35/154 (22%), Positives = 61/154 (39%), Gaps = 18/154 (11%) Query: 56 IKALEVIIEKANAAPIIVAYHFNSDL---ARLQK-------AFPQGRTLDKDPCTIQEWN 105 + L II +++ ++ L RL + T+ K + +N Sbjct: 411 LDCLLAIIRSTTDDKVVLISNYTQTLDVFERLCRERGYGFFRLDGSMTIKKRAKIVAAFN 470 Query: 106 EGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKR 163 P + G GLNL G N LV F W+ Q + RI + G K+ Sbjct: 471 VPSSPEFAFMLSSKAGGCGLNL-IGANRLVMFDPDWNPANDAQAMARIW-----RDGQKK 524 Query: 164 AVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 +VY L++ +I+E +LQR K + ++++ Sbjct: 525 PCYVYRLVSSGSIEEKILQRQTHKKALSSCVVDS 558 >gi|310790413|gb|EFQ25946.1| SNF2 family domain-containing protein [Glomerella graminicola M1.001] Length = 1874 Score = 111 bits (278), Expect = 5e-23, Method: Composition-based stats. Identities = 28/161 (17%), Positives = 62/161 (38%), Gaps = 19/161 (11%) Query: 50 EVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAF---------PQGRTL--DK 96 K+ L+ ++ + A +++ + + +++ G T D+ Sbjct: 1592 VTDSGKLATLDKLLTRLKAEGHRVLLYFQMTRMIDLMEEYLTYRNYKYCRLDGSTKLEDR 1651 Query: 97 DPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 +I + + G G+NL + ++F+ W+ Q ++R Sbjct: 1652 RDTVADFQTRPEIFIFLLSTRAGGLGINLT-SADTVIFYDSDWNPTIDSQAMDR-----A 1705 Query: 157 RQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + G R V VY LI + TI+E + +R K +Q +++ Sbjct: 1706 HRLGQTRQVTVYRLITKGTIEERIRKRAMQKEEVQRVVIQG 1746 >gi|308160724|gb|EFO63198.1| Transcriptional activator, putative [Giardia lamblia P15] Length = 1860 Score = 111 bits (278), Expect = 5e-23, Method: Composition-based stats. Identities = 31/163 (19%), Positives = 73/163 (44%), Gaps = 19/163 (11%) Query: 52 HDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQK----------AFPQGRTLDKDPC 99 K+ AL+ ++ P+++ L L+ G ++K Sbjct: 1665 DSGKLTALDKLLHTLYKTREPVLIYCQMTKMLDLLEDYLVFRRYNYVRLDGGDAVNKRGQ 1724 Query: 100 TIQEW-NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQ 158 ++ + + I + + GLNL + ++F+ W+ + Q ++R+ + Sbjct: 1725 IVERFMTDDTIFVFLLSTRAASLGLNLTR-ASTVIFYENDWNPTQDAQAMDRV-----HR 1778 Query: 159 AGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 G K++V +Y L+ + +IDE +L++ R+K +Q+L+L +++ Sbjct: 1779 LGQKKSVVIYRLVTEGSIDEKILEKARSKEIVQELVLRGQRRD 1821 >gi|253581922|ref|ZP_04859146.1| SWF/SNF family helicase [Fusobacterium varium ATCC 27725] gi|251836271|gb|EES64808.1| SWF/SNF family helicase [Fusobacterium varium ATCC 27725] Length = 926 Score = 111 bits (278), Expect = 5e-23, Method: Composition-based stats. Identities = 46/213 (21%), Positives = 80/213 (37%), Gaps = 30/213 (14%) Query: 2 KQYHKFQRELYCDLQGENI-------EAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDE 54 K Y + +R Y + I F + Q+ + E V Sbjct: 706 KLYEE-RRSYYYKMVNSQIRENGIGKTQFFILQALNELRQITSC-----PEAKSNGVTSS 759 Query: 55 KIKAL-EVIIEK-ANAAPIIVAYHFNSDLARLQKAFP---------QGRTLDKDPCTIQE 103 K + L I+E N ++V ++ + + + + G T D+ + Sbjct: 760 KREVLVNNIVEAVENGHKVLVFTNYINSIENICEDLKRYGINYLSMTGSTKDRQSLVDRF 819 Query: 104 WNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKR 163 + K + + G GLNL + + + WW+ Q I+R + G R Sbjct: 820 QKDNKYKVFIMTLKTGGVGLNLT-AADTIFIYDPWWNKTVENQAIDR-----AYRLGQDR 873 Query: 164 AVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 VF Y LI ++TI+E +LQ TKS + D L++ Sbjct: 874 TVFSYKLILKDTIEEKILQLQDTKSKLLDNLIS 906 >gi|300708513|ref|XP_002996434.1| hypothetical protein NCER_100481 [Nosema ceranae BRL01] gi|239605736|gb|EEQ82763.1| hypothetical protein NCER_100481 [Nosema ceranae BRL01] Length = 858 Score = 111 bits (278), Expect = 5e-23, Method: Composition-based stats. Identities = 28/159 (17%), Positives = 64/159 (40%), Gaps = 18/159 (11%) Query: 51 VHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQK----------AFPQGRTLDKDP 98 + K+ L+ ++ K +++ + + ++ + Sbjct: 698 IDSGKLACLDKLLTKLKQENHRVLIYFQMTKMMDLVEDYCVKKEFTYCRLDGSSKVSYRR 757 Query: 99 CTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQ 158 T+ +W G + + G G+NL + ++F+ W+ QQ ++R + Sbjct: 758 DTVNDWQTGDKFIFLLSTRAGGLGINLT-AADTVIFYDSDWNPTVDQQAMDR-----AYR 811 Query: 159 AGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 G + V VY LI +NTI+E V+++ K +Q +++ Sbjct: 812 IGQTKDVTVYRLITKNTIEERVIEKATHKGNLQKMVIKG 850 >gi|284053180|ref|ZP_06383390.1| SNF2-related helicase [Arthrospira platensis str. Paraca] Length = 1068 Score = 111 bits (278), Expect = 6e-23, Method: Composition-based stats. Identities = 33/219 (15%), Positives = 74/219 (33%), Gaps = 30/219 (13%) Query: 3 QYHKFQRELYCDLQGENIEAFNS--ASKTVKCLQLANGAVYYDEEKHWKE-------VHD 53 Y K E +++ VK Q+ N + + K+ + Sbjct: 825 LYQKLVDESLSEIESSTGIQRRGMILGLLVKLKQVCNHPLLLGAKTKAKKEMPTLNPGYS 884 Query: 54 EKIKALEVIIEK--ANAAPIIVAYHF-------NSDLARLQKAFP----QGRTLDKDPCT 100 K++ L ++E+ + ++ F L G + Sbjct: 885 GKLQRLNEMLEELISEGDRALIFTQFAEWGKLLKPYLEAKLNREVLFLYGGSRKLQREQM 944 Query: 101 IQEWNEGKI--PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQ 158 + + + P++ + G GLNL N + F WW+ Q +R+ + Sbjct: 945 VDRFQQDPQGPPVMILSLKAGGVGLNLTR-ANHVFHFDRWWNPAVENQATDRVF-----R 998 Query: 159 AGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 G R V V+ + T++E + + +K + + ++++ Sbjct: 999 IGQTRNVQVHKFVCTGTLEEKIHDLIESKQALAEQVVSS 1037 >gi|303281098|ref|XP_003059841.1| dexh-box helicase [Micromonas pusilla CCMP1545] gi|226458496|gb|EEH55793.1| dexh-box helicase [Micromonas pusilla CCMP1545] Length = 2006 Score = 111 bits (278), Expect = 6e-23, Method: Composition-based stats. Identities = 31/167 (18%), Positives = 66/167 (39%), Gaps = 19/167 (11%) Query: 44 EEKHWKEVHDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQ---------KAFPQGR 92 ++ + K++AL ++ K+ ++ L L+ G Sbjct: 1365 PDRRLVQFDCGKLQALAQLLRTLKSGGHKALIFTQMTKMLDILEAFLNLYGYPYCRLDGS 1424 Query: 93 TLDKDPCTI-QEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 T + + Q +N + ++ + S G G+NL G + ++F+ W+ QQ Sbjct: 1425 TRPEQRQILMQRYNTDPRLFVFILSTRSGGFGINLT-GADTVIFYDSDWNPAMDQQA--- 1480 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 R + G R V +Y ++ + TI+E +L++ K + + A Sbjct: 1481 --QDRAHRIGQTRPVRIYRMVCKGTIEENILKKSMQKRELDHFAIQA 1525 >gi|317063195|ref|ZP_07927680.1| SWF/SNF family helicase [Fusobacterium ulcerans ATCC 49185] gi|313688871|gb|EFS25706.1| SWF/SNF family helicase [Fusobacterium ulcerans ATCC 49185] Length = 926 Score = 111 bits (278), Expect = 6e-23, Method: Composition-based stats. Identities = 46/213 (21%), Positives = 80/213 (37%), Gaps = 30/213 (14%) Query: 2 KQYHKFQRELYCDLQGENI-------EAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDE 54 K Y + +R Y + I F + Q+ + E V Sbjct: 706 KLYEE-RRSYYYKMVNSQIRENGIGKTQFFILQALNELRQITSC-----PEAKSNGVTSS 759 Query: 55 KIKAL-EVIIEK-ANAAPIIVAYHFNSDLARLQKAFP---------QGRTLDKDPCTIQE 103 K + L I+E N ++V ++ + + + + G T D+ + Sbjct: 760 KREVLVNNIVEAVENGHKVLVFTNYINSIENICEDLKRYGINYLSMTGSTKDRQSLVDRF 819 Query: 104 WNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKR 163 + K + + G GLNL + + + WW+ Q I+R + G R Sbjct: 820 QKDNKYKVFIMTLKTGGVGLNLT-AADTIFIYDPWWNKTVENQAIDR-----AYRLGQDR 873 Query: 164 AVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 VF Y LI ++TI+E +LQ TKS + D L++ Sbjct: 874 TVFSYKLILKDTIEEKILQLQDTKSKLLDNLIS 906 >gi|257468947|ref|ZP_05633041.1| SWF/SNF family helicase [Fusobacterium ulcerans ATCC 49185] Length = 915 Score = 111 bits (278), Expect = 6e-23, Method: Composition-based stats. Identities = 46/213 (21%), Positives = 80/213 (37%), Gaps = 30/213 (14%) Query: 2 KQYHKFQRELYCDLQGENI-------EAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDE 54 K Y + +R Y + I F + Q+ + E V Sbjct: 695 KLYEE-RRSYYYKMVNSQIRENGIGKTQFFILQALNELRQITSC-----PEAKSNGVTSS 748 Query: 55 KIKAL-EVIIEK-ANAAPIIVAYHFNSDLARLQKAFP---------QGRTLDKDPCTIQE 103 K + L I+E N ++V ++ + + + + G T D+ + Sbjct: 749 KREVLVNNIVEAVENGHKVLVFTNYINSIENICEDLKRYGINYLSMTGSTKDRQSLVDRF 808 Query: 104 WNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKR 163 + K + + G GLNL + + + WW+ Q I+R + G R Sbjct: 809 QKDNKYKVFIMTLKTGGVGLNLT-AADTIFIYDPWWNKTVENQAIDR-----AYRLGQDR 862 Query: 164 AVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 VF Y LI ++TI+E +LQ TKS + D L++ Sbjct: 863 TVFSYKLILKDTIEEKILQLQDTKSKLLDNLIS 895 >gi|227503822|ref|ZP_03933871.1| helicase [Corynebacterium striatum ATCC 6940] gi|227199646|gb|EEI79694.1| helicase [Corynebacterium striatum ATCC 6940] Length = 1013 Score = 111 bits (278), Expect = 6e-23, Method: Composition-based stats. Identities = 40/214 (18%), Positives = 76/214 (35%), Gaps = 26/214 (12%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASK--TVKCLQLANG-AVYYDEEKHWKEVHDE---K 55 Y ++ L+ + + Q+ N A Y + K Sbjct: 781 ALYKALVDDVQKALETREGMSRRGLVLASLTRIKQICNHPAHYLGDGSSVTLKGKHRSGK 840 Query: 56 IKALEVIIEKA--NAAPIIVAYHFNSDLARLQKAFPQ-----------GRTLDKDPCTIQ 102 ++ L I+++A + I+V + + LQ Q G T +K ++ Sbjct: 841 VEELMRIVDQAIESEERILVFTQYKAFGDILQPYLTQQLGREIPFLHGGVTKNKRDQMVE 900 Query: 103 EWNEGK-IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGF 161 ++ P + + G GLNL +I+V WW+ Q +R + G Sbjct: 901 DFQSPDGPPAMILSLKAGGTGLNLT-AASIVVHMDRWWNPAVENQATDR-----AFRIGQ 954 Query: 162 KRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 +R V VY +I T++E + L K + ++ Sbjct: 955 QRNVQVYKMITAGTLEESIQDILDGKMHLAGAVV 988 >gi|294660081|ref|XP_002770708.1| DEHA2G22682p [Debaryomyces hansenii CBS767] gi|218512083|sp|Q6BGY8|INO80_DEBHA RecName: Full=Putative DNA helicase INO80 gi|199434455|emb|CAR66027.1| DEHA2G22682p [Debaryomyces hansenii] Length = 1364 Score = 111 bits (278), Expect = 6e-23, Method: Composition-based stats. Identities = 27/158 (17%), Positives = 63/158 (39%), Gaps = 19/158 (12%) Query: 53 DEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQK----------AFPQGRTLDKDPCT 100 K+ L+ ++ N +++ + + +++ LD Sbjct: 1141 SGKLSKLDELLVDLRQNDHRVLIYFQMTKMMDLMEEYLTYRQHKYIRLDGSSKLDDRRDL 1200 Query: 101 IQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQA 159 + +W + +I + + G G+NL + ++F+ W+ Q ++R + Sbjct: 1201 VHDWQTKPEIFVFLLSTRAGGLGINLT-AADTVIFYDSDWNPTIDSQAMDR-----AHRL 1254 Query: 160 GFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 G R V VY L+ + TI+E + R + K +Q +++ Sbjct: 1255 GQTRQVTVYRLLTRGTIEERMRDRAKQKEQVQQVVMEG 1292 >gi|159111807|ref|XP_001706134.1| Transcriptional activator, putative [Giardia lamblia ATCC 50803] gi|157434227|gb|EDO78460.1| Transcriptional activator, putative [Giardia lamblia ATCC 50803] Length = 1859 Score = 111 bits (277), Expect = 7e-23, Method: Composition-based stats. Identities = 31/163 (19%), Positives = 73/163 (44%), Gaps = 19/163 (11%) Query: 52 HDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQK----------AFPQGRTLDKDPC 99 K+ AL+ ++ P+++ L L+ G ++K Sbjct: 1664 DSGKLTALDKLLHNLYKTREPVLIYCQMTKMLDLLEDYLVFRRYNYVRLDGGDAVNKRGQ 1723 Query: 100 TIQEW-NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQ 158 ++ + + I + + GLNL + ++F+ W+ + Q ++R+ + Sbjct: 1724 IVERFMTDDTIFVFLLSTRAASLGLNLTR-ASTVIFYENDWNPTQDAQAMDRV-----HR 1777 Query: 159 AGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 G K++V +Y L+ + +IDE +L++ R+K +Q+L+L +++ Sbjct: 1778 LGQKKSVVIYRLVTEGSIDEKILEKARSKEIVQELVLRGQRRD 1820 >gi|330930041|ref|XP_003302867.1| hypothetical protein PTT_14851 [Pyrenophora teres f. teres 0-1] gi|311321495|gb|EFQ89043.1| hypothetical protein PTT_14851 [Pyrenophora teres f. teres 0-1] Length = 812 Score = 111 bits (277), Expect = 7e-23, Method: Composition-based stats. Identities = 40/173 (23%), Positives = 68/173 (39%), Gaps = 18/173 (10%) Query: 44 EEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLA--------RLQKAFPQGRTLD 95 E K W + + I I++ ++ L R F T++ Sbjct: 555 EVKTWYSGKMAVLDRMLARIRAETNDKIVLISNYTQTLDIFAMLCRSRGYGCFRLDGTMN 614 Query: 96 --KDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERI 151 K + ++N+ + P + + G GLNL G N LV F W+ QQ + R+ Sbjct: 615 VSKRQKLVDKFNDPESPEFVFLLSSKAGGCGLNL-IGANRLVLFDPDWNPAADQQALARV 673 Query: 152 GVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIH 204 + G K+ FVY I TI+E V QR K ++ ++++ + H Sbjct: 674 W-----RDGQKKDCFVYRFITTGTIEEKVFQRQSHKQSLSSCVVDSAEDVERH 721 >gi|189211141|ref|XP_001941901.1| helicase swr1 [Pyrenophora tritici-repentis Pt-1C-BFP] gi|187977994|gb|EDU44620.1| helicase swr1 [Pyrenophora tritici-repentis Pt-1C-BFP] Length = 812 Score = 111 bits (277), Expect = 7e-23, Method: Composition-based stats. Identities = 40/173 (23%), Positives = 68/173 (39%), Gaps = 18/173 (10%) Query: 44 EEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLA--------RLQKAFPQGRTLD 95 E K W + + I I++ ++ L R F T++ Sbjct: 555 EVKTWYSGKMAVLDRMLARIRAETNDKIVLISNYTQTLDIFAMLCRSRGYGCFRLDGTMN 614 Query: 96 --KDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERI 151 K + ++N+ + P + + G GLNL G N LV F W+ QQ + R+ Sbjct: 615 VSKRQKLVDKFNDPESPEFVFLLSSKAGGCGLNL-IGANRLVLFDPDWNPAADQQALARV 673 Query: 152 GVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIH 204 + G K+ FVY I TI+E V QR K ++ ++++ + H Sbjct: 674 W-----RDGQKKDCFVYRFITTGTIEEKVFQRQSHKQSLSSCVVDSAEDVERH 721 >gi|227501655|ref|ZP_03931704.1| helicase [Corynebacterium accolens ATCC 49725] gi|227077680|gb|EEI15643.1| helicase [Corynebacterium accolens ATCC 49725] Length = 1009 Score = 111 bits (277), Expect = 7e-23, Method: Composition-based stats. Identities = 41/214 (19%), Positives = 76/214 (35%), Gaps = 26/214 (12%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASK--TVKCLQLANGAVYY---DEEKHWKEVH-DEK 55 Y E+ L+ + + Q+ N +Y D K H K Sbjct: 777 ALYKALVNEVKKSLEDATGISKRGIVLASLTRIKQICNHPAHYLGDDSPVVIKGKHRSGK 836 Query: 56 IKALEVIIEKAN--AAPIIVAYHFNSDLARLQKAFPQ-----------GRTLDKDPCTIQ 102 +K L I++ A +++ + + LQ G T +K ++ Sbjct: 837 VKELMRIVDAATESGERLLIFTQYKAFGDILQPYLSGQLGHEIPFLHGGVTKNKRDQMVE 896 Query: 103 EWNEGKIP-LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGF 161 ++ P + + G GLNL +I+V WW+ Q +R + G Sbjct: 897 DFQADDGPQAMILSLKAGGTGLNLT-AASIVVHMDRWWNPAVENQATDR-----AFRIGQ 950 Query: 162 KRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 +R V VY +I T++E + L K+ + ++ Sbjct: 951 RRNVQVYKMITAGTLEESIQDILDGKTQLAGAVV 984 >gi|126654102|ref|ZP_01725924.1| helicase, putative [Bacillus sp. B14905] gi|126589410|gb|EAZ83559.1| helicase, putative [Bacillus sp. B14905] Length = 924 Score = 111 bits (277), Expect = 7e-23, Method: Composition-based stats. Identities = 37/189 (19%), Positives = 66/189 (34%), Gaps = 23/189 (12%) Query: 26 ASKTVKCLQLANG-AVYYDEEKHWKEVHDEKIKALEVIIEKA-----NAAPIIVAYHFNS 79 K QL N A+Y E E + LE I++ A N ++ + Sbjct: 721 LKMLSKLKQLCNHPALYLKEPFEDAETMLARSAKLERIVQMAAEIVDNGEQCLIFTQYIG 780 Query: 80 DLARLQKAFPQ-----------GRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYG 128 LQ + + ++ + G P+ + G GLNL Sbjct: 781 MGQLLQHCLSELYNVDAPFLTGAMPKQQRDRLVEAFQAGDFPIFILSLKAGGTGLNLT-A 839 Query: 129 GNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKS 188 N ++ WW+ Q +R + G + V V+ + TI+E + + L KS Sbjct: 840 ANHVLHADRWWNPAVENQATDR-----AYRIGQTQFVQVHKFVTLGTIEEKIDKMLAQKS 894 Query: 189 TIQDLLLNA 197 + + L+ + Sbjct: 895 ALSEELIQS 903 >gi|50286955|ref|XP_445907.1| hypothetical protein [Candida glabrata CBS 138] gi|74691046|sp|Q6FV37|INO80_CANGA RecName: Full=Putative DNA helicase INO80 gi|49525213|emb|CAG58826.1| unnamed protein product [Candida glabrata] Length = 1484 Score = 111 bits (277), Expect = 7e-23, Method: Composition-based stats. Identities = 28/163 (17%), Positives = 67/163 (41%), Gaps = 19/163 (11%) Query: 53 DEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQK----------AFPQGRTLDKDPCT 100 K+K L+ ++ + N +++ + + +++ L+ Sbjct: 1294 SAKLKKLDELLVELKKNDHRVLIYFQMTKMMDLMEEYLTYRQYNHIRLDGSSKLEDRRDL 1353 Query: 101 IQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQA 159 + +W +I + + G G+NL + ++F+ W+ Q ++R + Sbjct: 1354 VHDWQTNPEIFIFLLSTRAGGLGINLT-AADTVIFYDSDWNPTIDSQAMDR-----AHRL 1407 Query: 160 GFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKET 202 G + V VY L+ + TI+E + R + K +Q +++ K+T Sbjct: 1408 GQTKQVTVYRLLVRGTIEERMRDRAKQKEQVQQVVMEGKTKDT 1450 >gi|257456585|ref|ZP_05621780.1| Snf2 family protein [Treponema vincentii ATCC 35580] gi|257446005|gb|EEV21053.1| Snf2 family protein [Treponema vincentii ATCC 35580] Length = 1250 Score = 111 bits (277), Expect = 7e-23, Method: Composition-based stats. Identities = 37/214 (17%), Positives = 69/214 (32%), Gaps = 23/214 (10%) Query: 1 MKQYHKF-QRELYCDLQGENIEAFNSASK--TVKCLQLANGAVYYDEEKHWKEVHDEKIK 57 + Y + +L L+ E N+ Q+ N YDE K Sbjct: 1025 IALYESLVETQLKNVLKTEEGIKRNALVLKLLTALKQVCNHPHVYDESFQTNVTLSGKTA 1084 Query: 58 ALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQG-----------RTLDKDPCTIQEW 104 AL ++ + ++ + L L+K + L ++ + Sbjct: 1085 ALMQLLGEILDAGEKTLIFSQYTQTLFLLRKLIQEQFGDEPLLLHGQMPLSARKAAVESF 1144 Query: 105 N-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKR 163 + + G GLNL ++ F LW++ Q +R + G Sbjct: 1145 QTNPAQRIFLISLKAGGTGLNLT-AATRVIHFDLWYNPAIEDQATDR-----AFRIGQHN 1198 Query: 164 AVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 VFV I T +E + + ++ K I + L+ Sbjct: 1199 TVFVSRFICAGTFEEKIDEMIQKKRHISQMTLSG 1232 >gi|296814920|ref|XP_002847797.1| DNA repair and recombination protein RAD54 [Arthroderma otae CBS 113480] gi|238840822|gb|EEQ30484.1| DNA repair and recombination protein RAD54 [Arthroderma otae CBS 113480] Length = 819 Score = 111 bits (277), Expect = 7e-23, Method: Composition-based stats. Identities = 40/181 (22%), Positives = 70/181 (38%), Gaps = 18/181 (9%) Query: 36 ANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDL---ARLQKAFPQGR 92 +NG E K W + + I + I++ ++ L RL ++ G Sbjct: 557 SNGRRGDREVKSWYSGKMMVLDRMLARIRQDTNDKIVLISNYTQTLDLFERLCRSRGYGC 616 Query: 93 TL-------DKDPCTIQEWN--EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEE 143 K + +N G+ + + G G+NL G N LV F W+ Sbjct: 617 IRLDGTMGVKKRSKLVDRFNDPNGEEFVFLLSSKAGGCGINL-VGANRLVLFDPDWNPAA 675 Query: 144 HQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETI 203 QQ + R+ + G + FVY IA TI+E + QR K ++ ++++ + Sbjct: 676 DQQALARVW-----RDGQSKDCFVYRFIATGTIEEKIFQRQSHKQSLSSCVVDSAEDVER 730 Query: 204 H 204 H Sbjct: 731 H 731 >gi|260187090|ref|ZP_05764564.1| putative helicase [Mycobacterium tuberculosis CPHL_A] gi|289447722|ref|ZP_06437466.1| helicase helZ [Mycobacterium tuberculosis CPHL_A] gi|289420680|gb|EFD17881.1| helicase helZ [Mycobacterium tuberculosis CPHL_A] Length = 1014 Score = 111 bits (277), Expect = 7e-23, Method: Composition-based stats. Identities = 36/212 (16%), Positives = 67/212 (31%), Gaps = 25/212 (11%) Query: 3 QYHKFQRELYCDLQGEN--IEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 Y ++ ++ N + K Q+ N ++ K+ LE Sbjct: 781 LYQAVVADMMEKIENTEGIERRGNVLAAMAKLKQVCNHPAQLLHDRSPVGRRSGKVIRLE 840 Query: 61 VIIEKAN--AAPIIVAYHFNSDLARLQKAFP--------------QGRTLDKDPCTIQEW 104 I+E+ ++ F L G + + + Sbjct: 841 EILEEILAEGDRVLCFTQFTEFAELLVPHLAARFGRAARDIAYLHGGTPRKRRDEMVARF 900 Query: 105 NEGK-IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKR 163 G P+ + G GLNL N +V WW+ Q +R + G +R Sbjct: 901 QSGDGPPIFLLSLKAGGTGLNLT-AANHVVHLDRWWNPAVENQATDR-----AFRIGQRR 954 Query: 164 AVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 V V I T++E + + + K + DL++ Sbjct: 955 TVQVRKFICTGTLEEKIDEMIEEKKALADLVV 986 >gi|169826616|ref|YP_001696774.1| ATP-dependent helicase [Lysinibacillus sphaericus C3-41] gi|168991104|gb|ACA38644.1| Hypothetical ATP-dependent helicase [Lysinibacillus sphaericus C3-41] Length = 923 Score = 111 bits (277), Expect = 8e-23, Method: Composition-based stats. Identities = 36/189 (19%), Positives = 66/189 (34%), Gaps = 23/189 (12%) Query: 26 ASKTVKCLQLANG-AVYYDEEKHWKEVHDEKIKALEVIIEKA-----NAAPIIVAYHFNS 79 K QL N A+Y E + + LE I++ A N ++ + Sbjct: 720 LKMLSKLKQLCNHPALYLKEPFEDAQTMLARSAKLERIVQMAAEIVDNGEQCLIFTQYIG 779 Query: 80 DLARLQKAFPQ-----------GRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYG 128 LQ + + ++ + G P+ + G GLNL Sbjct: 780 MGQLLQHCLSELYNVDAPFLTGAMPKQQRDRLVEAFQAGDFPIFILSLKAGGTGLNLT-A 838 Query: 129 GNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKS 188 N ++ WW+ Q +R + G + V V+ + TI+E + + L KS Sbjct: 839 ANHVLHADRWWNPAVENQATDR-----AYRIGQTQFVQVHKFVTLGTIEEKIDKMLAQKS 893 Query: 189 TIQDLLLNA 197 + + L+ + Sbjct: 894 ALSEELIQS 902 >gi|260802348|ref|XP_002596054.1| hypothetical protein BRAFLDRAFT_202887 [Branchiostoma floridae] gi|229281308|gb|EEN52066.1| hypothetical protein BRAFLDRAFT_202887 [Branchiostoma floridae] Length = 791 Score = 111 bits (277), Expect = 8e-23, Method: Composition-based stats. Identities = 33/172 (19%), Positives = 67/172 (38%), Gaps = 17/172 (9%) Query: 44 EEKHWKEVHDEKIKALEVII----EKANAAPIIVAYHFNSDLARLQKAFPQGRT-----L 94 + + K++ L ++ + I+V ++ L +Q + R Sbjct: 517 DPNSSSPEYSGKLQVLADLLGSLYSEGPRERIVVVSNYTQTLDMVQVRYGYLRLDGSTPT 576 Query: 95 DKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIG 152 K ++ +N+ + + G GLNL G + LV + + W+ Q + R+ Sbjct: 577 GKRQQIVERFNDKYCRDFVFLLSTKAGGVGLNL-IGASRLVLYDIDWNPANDLQAMARVW 635 Query: 153 VTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIH 204 + G R V +Y LI TI+E + QR +K + +++A + Sbjct: 636 -----RDGQPRVVHIYRLITTGTIEEKIYQRQISKQGLSGAVVDAKSSSKVQ 682 >gi|322491113|emb|CBZ26378.1| putative helicase [Leishmania mexicana MHOM/GT/2001/U1103] Length = 1284 Score = 111 bits (277), Expect = 8e-23, Method: Composition-based stats. Identities = 34/162 (20%), Positives = 73/162 (45%), Gaps = 19/162 (11%) Query: 55 KIKALEVIIEKA--NAAPIIVAYHFNSDLARLQKAF---------PQGRTLDK-DPCTIQ 102 K++ LE ++K + +++ F L L++ G T + + Sbjct: 870 KLQFLETALKKMRNDGHRMLIFTQFVHMLNILERFLALIGVVYTRLDGSTKAELRQQYVD 929 Query: 103 EWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGF 161 +N + +I + S G GLNL G + ++F+ W+ Q +R + G Sbjct: 930 RFNADPRITCMILSTRSGGIGLNLT-GADTVIFYDSDWNPTMDLQAQDRC-----HRIGQ 983 Query: 162 KRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETI 203 R V +Y LI+++T++E +L++ R + + ++++ + TI Sbjct: 984 TRPVTIYRLISEHTVEESILEKARERKKLNNVVIRGGQFHTI 1025 >gi|317031306|ref|XP_001393160.2| DNA repair protein rhp54 [Aspergillus niger CBS 513.88] Length = 813 Score = 111 bits (277), Expect = 8e-23, Method: Composition-based stats. Identities = 37/173 (21%), Positives = 68/173 (39%), Gaps = 18/173 (10%) Query: 44 EEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQK----------AFPQGRT 93 + K W + + I + I++ ++ L +K T Sbjct: 559 DIKSWYSGKMMVLDRMLARIRQDTNDKIVLISNYTQTLDLFEKLCRTRGYGSLRLDGTMT 618 Query: 94 LDKDPCTIQEWNE--GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERI 151 + K + ++N G+ + + G GLNL G N LV F W+ QQ + R+ Sbjct: 619 VGKRQKLVDKFNNPDGEEFVFLLSSKAGGCGLNL-IGANRLVLFDPDWNPAADQQALARV 677 Query: 152 GVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIH 204 + G K+ FVY IA +I+E + QR K ++ ++++ + H Sbjct: 678 W-----RDGQKKDCFVYRFIATGSIEEKIFQRQSHKQSLSSCVVDSAEDVERH 725 >gi|134077689|emb|CAK45729.1| unnamed protein product [Aspergillus niger] Length = 846 Score = 111 bits (277), Expect = 8e-23, Method: Composition-based stats. Identities = 37/173 (21%), Positives = 68/173 (39%), Gaps = 18/173 (10%) Query: 44 EEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQK----------AFPQGRT 93 + K W + + I + I++ ++ L +K T Sbjct: 592 DIKSWYSGKMMVLDRMLARIRQDTNDKIVLISNYTQTLDLFEKLCRTRGYGSLRLDGTMT 651 Query: 94 LDKDPCTIQEWNE--GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERI 151 + K + ++N G+ + + G GLNL G N LV F W+ QQ + R+ Sbjct: 652 VGKRQKLVDKFNNPDGEEFVFLLSSKAGGCGLNL-IGANRLVLFDPDWNPAADQQALARV 710 Query: 152 GVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIH 204 + G K+ FVY IA +I+E + QR K ++ ++++ + H Sbjct: 711 W-----RDGQKKDCFVYRFIATGSIEEKIFQRQSHKQSLSSCVVDSAEDVERH 758 >gi|296138942|ref|YP_003646185.1| SNF2-related protein [Tsukamurella paurometabola DSM 20162] gi|296027076|gb|ADG77846.1| SNF2-related protein [Tsukamurella paurometabola DSM 20162] Length = 958 Score = 111 bits (277), Expect = 8e-23, Method: Composition-based stats. Identities = 41/215 (19%), Positives = 75/215 (34%), Gaps = 28/215 (13%) Query: 3 QYHKFQRELYCDLQGENIEAFNSASK--TVKCLQLANG-AVYYDEEK---HWKEVHDEKI 56 Y L +L+ + Q+ N A Y D+ + K+ Sbjct: 724 LYQAVLNRLVEELRRSEGMPRRGLVLASLTRLKQVCNHPAQYLDDGSPLLRRGQHRSGKV 783 Query: 57 KALEVIIE--KANAAPIIVAYHFNSDLARLQKAFPQG------------RTLDKDPCTIQ 102 + L I+E A+ +V + ++ AR+ + + G ++ Sbjct: 784 ELLADILETVAADGERALVFTQY-AEFARMLQPWLSGLLGAEVPVLDGSVPRRDRDAMVE 842 Query: 103 EWNEGK-IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGF 161 + G P+L A S G GLNL N +V WW+ Q +R + G Sbjct: 843 RFQAGDGAPVLLATVKSGGTGLNLT-AANHVVHVDRWWNPAVENQATDR-----AFRIGQ 896 Query: 162 KRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 +AV V + T++E + + K + D+ + Sbjct: 897 TKAVQVRKFVCAGTLEERIDGVIAAKRELSDMTVQ 931 >gi|150865205|ref|XP_001384327.2| SNF2 family DNA-dependent ATPase [Scheffersomyces stipitis CBS 6054] gi|149386461|gb|ABN66298.2| SNF2 family DNA-dependent ATPase [Scheffersomyces stipitis CBS 6054] Length = 715 Score = 111 bits (277), Expect = 8e-23, Method: Composition-based stats. Identities = 33/182 (18%), Positives = 70/182 (38%), Gaps = 16/182 (8%) Query: 25 SASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARL 84 + SKT +QL V D + ++ L I + IIV F S + Sbjct: 515 AISKTPTNMQLVQQLVKRDNGLTPSAKISKCVELLREIFKSYPGEKIIVFSQFTSLFDIM 574 Query: 85 QKAFPQGR----------TLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVF 134 + + T+D TI+ + + + +L + GL L ++++ Sbjct: 575 KLVLDKEEIDFLRYDGSMTIDHKNSTIKRFYQEDVKVLLLSLKAGNVGLTLTCASHVII- 633 Query: 135 FSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 +W+ +Q ++R + G +R VFV+ ++ T++ +++ K + Sbjct: 634 IDPFWNPYVEEQAMDR-----AHRIGQEREVFVHRILIAGTVESRIMELQDRKREMVGAA 688 Query: 195 LN 196 L+ Sbjct: 689 LD 690 >gi|121607802|ref|YP_995609.1| SNF2-like protein [Verminephrobacter eiseniae EF01-2] gi|121552442|gb|ABM56591.1| SNF2-related protein [Verminephrobacter eiseniae EF01-2] Length = 917 Score = 110 bits (276), Expect = 8e-23, Method: Composition-based stats. Identities = 29/186 (15%), Positives = 63/186 (33%), Gaps = 20/186 (10%) Query: 26 ASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAA--PIIVAYHFNSDLAR 83 + ++ Q+ N + + + K L + E ++V F A Sbjct: 706 LAFLMRFKQICNHPSQWLGDGAYGPSDSGKFARLRELAEAVAGRQEKVLVFTQFQEMTAP 765 Query: 84 LQKAFP-----------QGRTLDKDPCTIQEWNEGK-IPLLFAHPASCGHGLNLQYGGNI 131 L + G + + + + + P + G GLNL + Sbjct: 766 LVQFLQSVFARPGLVLHGGTAVKERAALVDAFQREQGPPFFVLSLKAGGTGLNLT-AASH 824 Query: 132 LVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQ 191 +V F WW+ Q +R + G K+ V V+ + + T++E + + K + Sbjct: 825 VVHFDRWWNPAVENQATDR-----AYRIGQKKNVLVHKFVCRGTVEERIDALVEAKLGLS 879 Query: 192 DLLLNA 197 + ++ Sbjct: 880 NQIIEG 885 >gi|261416687|ref|YP_003250370.1| SNF2-related protein [Fibrobacter succinogenes subsp. succinogenes S85] gi|261373143|gb|ACX75888.1| SNF2-related protein [Fibrobacter succinogenes subsp. succinogenes S85] Length = 1284 Score = 110 bits (276), Expect = 8e-23, Method: Composition-based stats. Identities = 35/168 (20%), Positives = 63/168 (37%), Gaps = 20/168 (11%) Query: 44 EEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFP-----------Q 90 + ++ K++ L ++ ++ F L+ Sbjct: 1099 APQKSNKLESGKMQMLLDLLTSIQEQGEKTLIFTQFAEMGHLLKSTIESELGLRTHFYHG 1158 Query: 91 GRTLDKDPCTIQEWNE-GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIE 149 G T + IQ++ E +L + G GLNL + ++ + LWW+ Q + Sbjct: 1159 GCTQTQRSEMIQDFQENPDCKVLILSLKAGGTGLNL-VAASQVIHYDLWWNPAIEAQATD 1217 Query: 150 RIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 R + G KR V V+ I + T +E + L TK I +L +NA Sbjct: 1218 R-----AFRIGQKRNVQVHRFITKGTFEEKINALLETKKAIANLTVNA 1260 >gi|213405783|ref|XP_002173663.1| DNA repair and recombination protein RAD54 [Schizosaccharomyces japonicus yFS275] gi|212001710|gb|EEB07370.1| DNA repair and recombination protein RAD54 [Schizosaccharomyces japonicus yFS275] Length = 853 Score = 110 bits (276), Expect = 8e-23, Method: Composition-based stats. Identities = 38/175 (21%), Positives = 71/175 (40%), Gaps = 21/175 (12%) Query: 45 EKHWKEVHDEKIKALEVI---IEKANAAPIIVAYHFNSDLARLQK----------AFPQG 91 ++H K+ LE + I+K I++ ++ S L ++ Sbjct: 609 DRHVDSSLSGKMLVLERMLYRIKKETDDKIVLISNYTSTLDLFEQVCRTRGYKALRLDGT 668 Query: 92 RTLDKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIE 149 + K + E+N+ + + + G G+NL G N L+ F W+ QQ + Sbjct: 669 MNVSKRQRLVDEFNDPEKDAFVFLLSSKAGGCGINL-IGANRLILFDPDWNPAADQQALA 727 Query: 150 RIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIH 204 R+ + G K+ FVY IA TI+E + QR K ++ +++ + H Sbjct: 728 RVW-----RDGQKKDCFVYRFIATGTIEEKIFQRQSHKQSLSSCVVDEAQDVERH 777 >gi|15609238|ref|NP_216617.1| helicase HelZ [Mycobacterium tuberculosis H37Rv] gi|2909552|emb|CAA17284.1| PROBABLE HELICASE HELZ [Mycobacterium tuberculosis H37Rv] Length = 1013 Score = 110 bits (276), Expect = 9e-23, Method: Composition-based stats. Identities = 36/212 (16%), Positives = 67/212 (31%), Gaps = 25/212 (11%) Query: 3 QYHKFQRELYCDLQGEN--IEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 Y ++ ++ N + K Q+ N ++ K+ LE Sbjct: 780 LYQAVVADMMEKIENTEGIERRGNVLAAMAKLKQVCNHPAQLLHDRSPVGRRSGKVIRLE 839 Query: 61 VIIEKAN--AAPIIVAYHFNSDLARLQKAFP--------------QGRTLDKDPCTIQEW 104 I+E+ ++ F L G + + + Sbjct: 840 EILEEILAEGDRVLCFTQFTEFAELLVPHLAARFGRAARDIAYLHGGTPRKRRDEMVARF 899 Query: 105 NEGK-IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKR 163 G P+ + G GLNL N +V WW+ Q +R + G +R Sbjct: 900 QSGDGPPIFLLSLKAGGTGLNLT-AANHVVHLDRWWNPAVENQATDR-----AFRIGQRR 953 Query: 164 AVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 V V I T++E + + + K + DL++ Sbjct: 954 TVQVRKFICTGTLEEKIDEMIEEKKALADLVV 985 >gi|148661915|ref|YP_001283438.1| putative helicase HelZ [Mycobacterium tuberculosis H37Ra] gi|306776343|ref|ZP_07414680.1| helicase helZ [Mycobacterium tuberculosis SUMu001] gi|306972457|ref|ZP_07485118.1| helicase helZ [Mycobacterium tuberculosis SUMu010] gi|307080168|ref|ZP_07489338.1| helicase helZ [Mycobacterium tuberculosis SUMu011] gi|307084748|ref|ZP_07493861.1| helicase helZ [Mycobacterium tuberculosis SUMu012] gi|148506067|gb|ABQ73876.1| putative helicase HelZ [Mycobacterium tuberculosis H37Ra] gi|308215227|gb|EFO74626.1| helicase helZ [Mycobacterium tuberculosis SUMu001] gi|308358097|gb|EFP46948.1| helicase helZ [Mycobacterium tuberculosis SUMu010] gi|308362031|gb|EFP50882.1| helicase helZ [Mycobacterium tuberculosis SUMu011] gi|308365678|gb|EFP54529.1| helicase helZ [Mycobacterium tuberculosis SUMu012] Length = 1013 Score = 110 bits (276), Expect = 9e-23, Method: Composition-based stats. Identities = 36/212 (16%), Positives = 67/212 (31%), Gaps = 25/212 (11%) Query: 3 QYHKFQRELYCDLQGEN--IEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 Y ++ ++ N + K Q+ N ++ K+ LE Sbjct: 780 LYQAVVADMMEKIENTEGIERRGNVLAAMAKLKQVCNHPAQLLHDRSPVGRRSGKVIRLE 839 Query: 61 VIIEKAN--AAPIIVAYHFNSDLARLQKAFP--------------QGRTLDKDPCTIQEW 104 I+E+ ++ F L G + + + Sbjct: 840 EILEEILAEGDRVLCFTQFTEFAELLVPHLAARFGRAARDIAYLHGGTPRKRRDEMVARF 899 Query: 105 NEGK-IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKR 163 G P+ + G GLNL N +V WW+ Q +R + G +R Sbjct: 900 QSGDGPPIFLLSLKAGGTGLNLT-AANHVVHLDRWWNPAVENQATDR-----AFRIGQRR 953 Query: 164 AVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 V V I T++E + + + K + DL++ Sbjct: 954 TVQVRKFICTGTLEEKIDEMIEEKKALADLVV 985 >gi|237739928|ref|ZP_04570409.1| SWF/SNF family helicase [Fusobacterium sp. 2_1_31] gi|229421945|gb|EEO36992.1| SWF/SNF family helicase [Fusobacterium sp. 2_1_31] Length = 896 Score = 110 bits (276), Expect = 9e-23, Method: Composition-based stats. Identities = 35/169 (20%), Positives = 72/169 (42%), Gaps = 16/169 (9%) Query: 38 GAVYYDEEKHWKEVHDEKIKALEVIIEK-ANAAPIIVAYHFNSDLARLQKAFPQ------ 90 V E + K + +K +E +IE N +++ ++ S + + + + Sbjct: 714 HIVSSPELDNNKIISSKKEVLIENVIEAIENDHKVLIFVNYLSSIESICNSLKENKIKFL 773 Query: 91 ---GRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQM 147 G+T D+ + ++ + + + G GLNL + + + WW+ Q Sbjct: 774 KMTGQTKDRQSLVDKFQSDNRYKVFVMTLKTGGVGLNL-VSADTIFIYDPWWNKTVENQA 832 Query: 148 IERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 I+R + G + VF Y +I +NTI+E +L+ K + D L++ Sbjct: 833 IDR-----AYRLGQDKTVFAYKMIMRNTIEEKILKLQEIKDKLLDDLIS 876 >gi|114332146|ref|YP_748368.1| SNF2-related protein [Nitrosomonas eutropha C91] gi|114309160|gb|ABI60403.1| SNF2-related protein [Nitrosomonas eutropha C91] Length = 897 Score = 110 bits (276), Expect = 9e-23, Method: Composition-based stats. Identities = 35/188 (18%), Positives = 63/188 (33%), Gaps = 24/188 (12%) Query: 26 ASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIE--KANAAPIIVAYHFNSDLAR 83 S ++ Q+ N + + WK K L I E A ++V F A Sbjct: 691 LSFLMRFKQICNHPSQWLNDGGWKPEESGKFARLHEIAETVAARQEKLLVFTQFQETTAP 750 Query: 84 LQKAFPQGRTLDKDPCTIQ--------------EWNEGKIPLLFAHPASCGHGLNLQYGG 129 L G ++ + + +P + G GLNL Sbjct: 751 LAAFL--GSVFGREGLVLHGGTPVVRRRELVRRFQEDESVPFFVLSIKAGGSGLNLT-AA 807 Query: 130 NILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKST 189 + +V F WW+ Q +R + G + V V+ I + TI+E + + + K Sbjct: 808 SHVVHFDRWWNPAVENQATDR-----AYRIGQHKNVLVHKFICRGTIEERIDELIHAKQQ 862 Query: 190 IQDLLLNA 197 + ++ Sbjct: 863 LVQDVVEG 870 >gi|291569923|dbj|BAI92195.1| SNF2 helicase homolog [Arthrospira platensis NIES-39] Length = 1068 Score = 110 bits (276), Expect = 9e-23, Method: Composition-based stats. Identities = 33/219 (15%), Positives = 74/219 (33%), Gaps = 30/219 (13%) Query: 3 QYHKFQRELYCDLQGENIEAFNS--ASKTVKCLQLANGAVYYDEEKHWKE-------VHD 53 Y K E +++ VK Q+ N + + K+ + Sbjct: 825 LYQKLVDESLSEIESSTGIQRRGMILGLLVKLKQVCNHPLLLGAKTKAKKEMPTLNSAYS 884 Query: 54 EKIKALEVIIEK--ANAAPIIVAYHF-------NSDLARLQKAFP----QGRTLDKDPCT 100 K++ L ++E+ + ++ F L G + Sbjct: 885 GKLQRLNEMLEELISEGDRALIFTQFAEWGKLLKPYLEAKLNREVLFLYGGSRKLQREQM 944 Query: 101 IQEWNEGKI--PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQ 158 + + + P++ + G GLNL N + F WW+ Q +R+ + Sbjct: 945 VDRFQQDPQGPPVMILSLKAGGVGLNLTR-ANHVFHFDRWWNPAVENQATDRVF-----R 998 Query: 159 AGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 G R V V+ + T++E + + +K + + ++++ Sbjct: 999 IGQTRNVQVHKFVCTGTLEEKIHDLIESKQALAEQVVSS 1037 >gi|227548395|ref|ZP_03978444.1| helicase [Corynebacterium lipophiloflavum DSM 44291] gi|227079533|gb|EEI17496.1| helicase [Corynebacterium lipophiloflavum DSM 44291] Length = 1039 Score = 110 bits (276), Expect = 9e-23, Method: Composition-based stats. Identities = 33/214 (15%), Positives = 74/214 (34%), Gaps = 26/214 (12%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASK--TVKCLQLANGAVYYDEEKHWKEVH----DEK 55 Y R+ +L+ A + Q+ N ++ + + K Sbjct: 806 ALYTALVRDAQAELEEREGMARKGMVLATITRIKQICNHPAHFLGDGSAVTLKGKHRSGK 865 Query: 56 IKALEVIIEKA--NAAPIIVAYHFNSDLARLQKAFPQ-----------GRTLDKDPCTIQ 102 + L ++ +A + +++ + + A LQ + G + D + Sbjct: 866 VAMLMELLGEAINSEQRVLIFTQYKAFGALLQPYLSERLGEPVPFLHGGVSKDARDAMVD 925 Query: 103 EWNE-GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGF 161 + G + + G GLNL ++++ WW+ Q +R + G Sbjct: 926 SFQSVGGPRAMLLSLKAGGTGLNLT-AASVVIHLDRWWNPAVENQATDR-----AYRIGQ 979 Query: 162 KRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 + V VY +I + T++E + L K + ++ Sbjct: 980 DKNVTVYKMITRGTLEESIQDVLDGKMHLAGTVV 1013 >gi|452690|emb|CAA82750.1| DNA repair protein [Schizosaccharomyces pombe] Length = 852 Score = 110 bits (276), Expect = 9e-23, Method: Composition-based stats. Identities = 35/175 (20%), Positives = 71/175 (40%), Gaps = 21/175 (12%) Query: 45 EKHWKEVHDEKIKALEVI---IEKANAAPIIVAYHFNSDLARLQK----------AFPQG 91 +++ K+ LE + I++ I++ ++ S L ++ Sbjct: 601 DRNIDSSLSGKMLVLERMLYQIKQETDDKIVLISNYTSTLDLFEQLCRARGYKALRLDGT 660 Query: 92 RTLDKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIE 149 ++K + +N+ + + + G G+NL G N L+ F W+ QQ + Sbjct: 661 MNVNKRQRLVDTFNDPEKDAFVFLLSSKAGGCGINL-IGANRLILFDPDWNPAADQQALA 719 Query: 150 RIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIH 204 R+ + G K+ FVY IA TI+E + QR K ++ +++ + H Sbjct: 720 RVW-----RDGQKKDCFVYRFIATGTIEEKIFQRQSHKQSLSSCVVDEAQDVERH 769 >gi|19115202|ref|NP_594290.1| Rad54 homolog Rhp54 [Schizosaccharomyces pombe 972h-] gi|3123262|sp|P41410|RAD54_SCHPO RecName: Full=DNA repair protein rhp54; AltName: Full=RAD54 homolog 1 gi|2239180|emb|CAB10100.1| Rad54 homolog Rhp54 [Schizosaccharomyces pombe] Length = 852 Score = 110 bits (276), Expect = 9e-23, Method: Composition-based stats. Identities = 35/175 (20%), Positives = 71/175 (40%), Gaps = 21/175 (12%) Query: 45 EKHWKEVHDEKIKALEVI---IEKANAAPIIVAYHFNSDLARLQK----------AFPQG 91 +++ K+ LE + I++ I++ ++ S L ++ Sbjct: 601 DRNIDSSLSGKMLVLERMLYQIKQETDDKIVLISNYTSTLDLFEQLCRARGYKALRLDGT 660 Query: 92 RTLDKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIE 149 ++K + +N+ + + + G G+NL G N L+ F W+ QQ + Sbjct: 661 MNVNKRQRLVDTFNDPEKDAFVFLLSSKAGGCGINL-IGANRLILFDPDWNPAADQQALA 719 Query: 150 RIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIH 204 R+ + G K+ FVY IA TI+E + QR K ++ +++ + H Sbjct: 720 RVW-----RDGQKKDCFVYRFIATGTIEEKIFQRQSHKQSLSSCVVDEAQDVERH 769 >gi|294782979|ref|ZP_06748305.1| Snf2 family protein [Fusobacterium sp. 1_1_41FAA] gi|294481620|gb|EFG29395.1| Snf2 family protein [Fusobacterium sp. 1_1_41FAA] Length = 896 Score = 110 bits (276), Expect = 9e-23, Method: Composition-based stats. Identities = 35/169 (20%), Positives = 72/169 (42%), Gaps = 16/169 (9%) Query: 38 GAVYYDEEKHWKEVHDEKIKALEVIIEK-ANAAPIIVAYHFNSDLARLQKAFPQ------ 90 V E + K + +K +E +IE N +++ ++ S + + + + Sbjct: 714 HIVSSPELDNNKIISSKKEVLIENVIEAIENDHKVLIFVNYLSSIESICNSLKENKIKFL 773 Query: 91 ---GRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQM 147 G+T D+ + ++ + + + G GLNL + + + WW+ Q Sbjct: 774 KMTGQTKDRQSLVDKFQSDNRYKVFVMTLKTGGVGLNL-VSADTIFIYDPWWNKTVENQA 832 Query: 148 IERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 I+R + G + VF Y +I +NTI+E +L+ K + D L++ Sbjct: 833 IDR-----AYRLGQDKTVFAYKMIMRNTIEEKILKLQEIKDKLLDDLIS 876 >gi|256072791|ref|XP_002572717.1| helicase [Schistosoma mansoni] gi|238657881|emb|CAZ28949.1| helicase, putative [Schistosoma mansoni] Length = 1753 Score = 110 bits (276), Expect = 9e-23, Method: Composition-based stats. Identities = 33/182 (18%), Positives = 72/182 (39%), Gaps = 19/182 (10%) Query: 31 KCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAF 88 K QL + + K++ L ++ + + +++ L L++ Sbjct: 1323 KLHQLVMSCRIQFPDPRLIQYDCGKLQRLHSLLRELKSGNHRVLIFTQMARMLDILEQFL 1382 Query: 89 ---------PQGRTLDKDPCTI-QEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSL 137 G T + + + +N + +I + S G G+NL G + ++F+ Sbjct: 1383 AYHGHRYLRLDGTTKVEQRQVLMERFNQDSQIFVFILSTRSGGLGINLT-GADTVIFYDS 1441 Query: 138 WWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 W+ Q +R + G R V +Y LI++ T++E +L++ K + D+ + Sbjct: 1442 DWNPTMDAQAQDRC-----HRIGQTRDVHIYRLISERTVEENILRKANQKRFLSDVAIEG 1496 Query: 198 LK 199 K Sbjct: 1497 GK 1498 >gi|256072789|ref|XP_002572716.1| helicase [Schistosoma mansoni] gi|238657880|emb|CAZ28948.1| helicase, putative [Schistosoma mansoni] Length = 2395 Score = 110 bits (276), Expect = 9e-23, Method: Composition-based stats. Identities = 33/182 (18%), Positives = 72/182 (39%), Gaps = 19/182 (10%) Query: 31 KCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAF 88 K QL + + K++ L ++ + + +++ L L++ Sbjct: 1323 KLHQLVMSCRIQFPDPRLIQYDCGKLQRLHSLLRELKSGNHRVLIFTQMARMLDILEQFL 1382 Query: 89 ---------PQGRTLDKDPCTI-QEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSL 137 G T + + + +N + +I + S G G+NL G + ++F+ Sbjct: 1383 AYHGHRYLRLDGTTKVEQRQVLMERFNQDSQIFVFILSTRSGGLGINLT-GADTVIFYDS 1441 Query: 138 WWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 W+ Q +R + G R V +Y LI++ T++E +L++ K + D+ + Sbjct: 1442 DWNPTMDAQAQDRC-----HRIGQTRDVHIYRLISERTVEENILRKANQKRFLSDVAIEG 1496 Query: 198 LK 199 K Sbjct: 1497 GK 1498 >gi|196008607|ref|XP_002114169.1| hypothetical protein TRIADDRAFT_27976 [Trichoplax adhaerens] gi|190583188|gb|EDV23259.1| hypothetical protein TRIADDRAFT_27976 [Trichoplax adhaerens] Length = 687 Score = 110 bits (276), Expect = 9e-23, Method: Composition-based stats. Identities = 36/161 (22%), Positives = 64/161 (39%), Gaps = 22/161 (13%) Query: 52 HDEKIKALEVIIE----KANAAPIIVAYHFNSDLARLQK----------AFPQGRTLDKD 97 H K+ L +++ + ++V +F L LQK K Sbjct: 490 HSGKLAVLSNLLDWIYQNSPKEKVVVVSNFTRTLDVLQKMCKSKNYRYVRLDGSTPTSKR 549 Query: 98 PCTIQEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTR 155 ++ +N K + + G GLNL G + LV + + W+ Q + RI Sbjct: 550 HTIVENFNSSYSKTFVFLLSSKAGGTGLNL-IGASRLVLYDIDWNPANDLQAMARIW--- 605 Query: 156 QRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + G KR V++Y L+ TI+E + QR K + +++ Sbjct: 606 --RDGQKRDVYIYRLVTTGTIEEKIFQRQVMKHDLSGAVMD 644 >gi|289554116|ref|ZP_06443326.1| LOW QUALITY PROTEIN: helicase helZ [Mycobacterium tuberculosis KZN 605] gi|289438748|gb|EFD21241.1| LOW QUALITY PROTEIN: helicase helZ [Mycobacterium tuberculosis KZN 605] Length = 911 Score = 110 bits (276), Expect = 1e-22, Method: Composition-based stats. Identities = 36/212 (16%), Positives = 67/212 (31%), Gaps = 25/212 (11%) Query: 3 QYHKFQRELYCDLQGEN--IEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 Y ++ ++ N + K Q+ N ++ K+ LE Sbjct: 678 LYQAVVADMMEKIENTEGIERRGNVLAAMAKLKQVCNHPAQLLHDRSPVGRRSGKVIRLE 737 Query: 61 VIIEKAN--AAPIIVAYHFNSDLARLQKAFP--------------QGRTLDKDPCTIQEW 104 I+E+ ++ F L G + + + Sbjct: 738 EILEEILAEGDRVLCFTQFTEFAELLVPHLAARFGRAARDIAYLHGGTPRKRRDEMVARF 797 Query: 105 NEGK-IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKR 163 G P+ + G GLNL N +V WW+ Q +R + G +R Sbjct: 798 QSGDGPPIFLLSLKAGGTGLNLT-AANHVVHLDRWWNPAVENQATDR-----AFRIGQRR 851 Query: 164 AVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 V V I T++E + + + K + DL++ Sbjct: 852 TVQVRKFICTGTLEEKIDEMIEEKKALADLVV 883 >gi|146104782|ref|XP_001469910.1| helicase [Leishmania infantum] gi|134074280|emb|CAM73025.1| putative helicase [Leishmania infantum JPCM5] Length = 1285 Score = 110 bits (276), Expect = 1e-22, Method: Composition-based stats. Identities = 34/162 (20%), Positives = 73/162 (45%), Gaps = 19/162 (11%) Query: 55 KIKALEVIIEKA--NAAPIIVAYHFNSDLARLQKAF---------PQGRTLDK-DPCTIQ 102 K++ LE ++K + +++ F L L++ G T + + Sbjct: 870 KLQFLETALKKMRDDGHRMLIFTQFVHMLNILERFLALIGIVYTRLDGSTKAELRQQYVD 929 Query: 103 EWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGF 161 +N + +I + S G GLNL G + ++F+ W+ Q +R + G Sbjct: 930 RFNADPRITCMILSTRSGGIGLNLT-GADTVIFYDSDWNPTIDLQAQDRC-----HRIGQ 983 Query: 162 KRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETI 203 R V +Y LI+++T++E +L++ R + + ++++ + TI Sbjct: 984 TRPVTIYRLISEHTVEESILEKARERKKLNNVVIRGGQFHTI 1025 >gi|31793283|ref|NP_855776.1| helicase HelZ [Mycobacterium bovis AF2122/97] gi|121637985|ref|YP_978209.1| putative helicase helZ [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|224990479|ref|YP_002645166.1| putative helicase [Mycobacterium bovis BCG str. Tokyo 172] gi|31618875|emb|CAD96980.1| PROBABLE HELICASE HELZ [Mycobacterium bovis AF2122/97] gi|121493633|emb|CAL72108.1| Probable helicase helZ [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|224773592|dbj|BAH26398.1| putative helicase [Mycobacterium bovis BCG str. Tokyo 172] Length = 1013 Score = 110 bits (276), Expect = 1e-22, Method: Composition-based stats. Identities = 36/212 (16%), Positives = 67/212 (31%), Gaps = 25/212 (11%) Query: 3 QYHKFQRELYCDLQGEN--IEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 Y ++ ++ N + K Q+ N ++ K+ LE Sbjct: 780 LYQAVVADMMEKIENTEGIERRGNVLAAMAKLKQVCNHPAQLLHDRSPVGRRSGKVIRLE 839 Query: 61 VIIEKAN--AAPIIVAYHFNSDLARLQKAFP--------------QGRTLDKDPCTIQEW 104 I+E+ ++ F L G + + + Sbjct: 840 EILEEILAEGDRVLCFTQFTEFAELLVPHLAARFGRAARDIAYLHGGTPRKRRDEMVARF 899 Query: 105 NEGK-IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKR 163 G P+ + G GLNL N +V WW+ Q +R + G +R Sbjct: 900 QSGDGPPIFLLSLKAGGTGLNLT-AANHVVHLDRWWNPAVENQATDR-----AFRIGQRR 953 Query: 164 AVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 V V I T++E + + + K + DL++ Sbjct: 954 TVQVRKFICTGTLEEKIDEMIEEKKALADLVV 985 >gi|215431026|ref|ZP_03428945.1| helicase helZ [Mycobacterium tuberculosis EAS054] gi|289754211|ref|ZP_06513589.1| helicase helZ [Mycobacterium tuberculosis EAS054] gi|289694798|gb|EFD62227.1| helicase helZ [Mycobacterium tuberculosis EAS054] Length = 1013 Score = 110 bits (276), Expect = 1e-22, Method: Composition-based stats. Identities = 36/212 (16%), Positives = 67/212 (31%), Gaps = 25/212 (11%) Query: 3 QYHKFQRELYCDLQGEN--IEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 Y ++ ++ N + K Q+ N ++ K+ LE Sbjct: 780 LYQAVVADMMEKIENTEGIERRGNVLAAMAKLKQVCNHPAQLLHDRSPVGRRSGKVIRLE 839 Query: 61 VIIEKAN--AAPIIVAYHFNSDLARLQKAFP--------------QGRTLDKDPCTIQEW 104 I+E+ ++ F L G + + + Sbjct: 840 EILEEILAEGDRVLCFTQFTEFAELLVPHLAARFGRAARDIAYLHGGTPRKRRDEMVARF 899 Query: 105 NEGK-IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKR 163 G P+ + G GLNL N +V WW+ Q +R + G +R Sbjct: 900 QSGDGPPIFLLSLKAGGTGLNLT-AANHVVHLDRWWNPAVENQATDR-----AFRIGQRR 953 Query: 164 AVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 V V I T++E + + + K + DL++ Sbjct: 954 TVQVRKFICTGTLEEKIDEMIEEKKALADLVV 985 >gi|56964329|ref|YP_176060.1| DNA/RNA helicase [Bacillus clausii KSM-K16] gi|56910572|dbj|BAD65099.1| SNF2 family DNA/RNA helicase [Bacillus clausii KSM-K16] Length = 997 Score = 110 bits (276), Expect = 1e-22, Method: Composition-based stats. Identities = 27/182 (14%), Positives = 61/182 (33%), Gaps = 20/182 (10%) Query: 29 TVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQK 86 + Q+ N + ++ K A I+ + +++ + + Sbjct: 795 ITRMKQICNHPAQFYKDGDIAGHQSGKWDAFLDIVASIFSKGESVLIFTQYKEMGKLISH 854 Query: 87 AFP-----------QGRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVF 134 G + + I+++ + + G GLNL N ++ Sbjct: 855 ELQARYEVPVPFLHGGLSRSQRRMAIEQFQHDPHAAAFVLSLKAGGVGLNLTKATN-VIH 913 Query: 135 FSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 + WW+ Q +R + G + V VY L+ T++E + Q + K + + + Sbjct: 914 YDRWWNPAVENQATDR-----AYRIGQTKPVQVYKLLTAGTVEERIDQLINGKKALAEGV 968 Query: 195 LN 196 L Sbjct: 969 LQ 970 >gi|146324514|ref|XP_751168.2| dsDNA-dependent ATPase Rad54 [Aspergillus fumigatus Af293] gi|129557284|gb|EAL89130.2| dsDNA-dependent ATPase Rad54, putative [Aspergillus fumigatus Af293] Length = 807 Score = 110 bits (276), Expect = 1e-22, Method: Composition-based stats. Identities = 36/173 (20%), Positives = 68/173 (39%), Gaps = 18/173 (10%) Query: 44 EEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQK----------AFPQGRT 93 + K W + + I + I++ ++ L +K Sbjct: 553 DIKSWYSGKMMVLDRMLARIRQDTNDKIVLISNYTQTLDLFEKLCRSRGYGSLRLDGTMN 612 Query: 94 LDKDPCTIQEWNE--GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERI 151 ++K + ++N G+ + + G GLNL G N LV F W+ QQ + R+ Sbjct: 613 INKRQKLVDKFNNPDGEEFVFLLSSKAGGCGLNL-IGANRLVLFDPDWNPAADQQALARV 671 Query: 152 GVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIH 204 + G K+ FVY IA +I+E + QR K ++ ++++ + H Sbjct: 672 W-----RDGQKKDCFVYRFIATGSIEEKIFQRQSHKQSLSSCVVDSAEDVERH 719 >gi|119472846|ref|XP_001258430.1| SNF2 family N-terminal domain protein [Neosartorya fischeri NRRL 181] gi|119406582|gb|EAW16533.1| SNF2 family N-terminal domain protein [Neosartorya fischeri NRRL 181] Length = 835 Score = 110 bits (276), Expect = 1e-22, Method: Composition-based stats. Identities = 36/173 (20%), Positives = 68/173 (39%), Gaps = 18/173 (10%) Query: 44 EEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQK----------AFPQGRT 93 + K W + + I + I++ ++ L +K Sbjct: 581 DIKSWYSGKMMVLDRMLARIRQDTNDKIVLISNYTQTLDLFEKLCRSRGYGSLRLDGTMN 640 Query: 94 LDKDPCTIQEWNE--GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERI 151 ++K + ++N G+ + + G GLNL G N LV F W+ QQ + R+ Sbjct: 641 INKRQKLVDKFNNPDGEEFVFLLSSKAGGCGLNL-IGANRLVLFDPDWNPAADQQALARV 699 Query: 152 GVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIH 204 + G K+ FVY IA +I+E + QR K ++ ++++ + H Sbjct: 700 W-----RDGQKKDCFVYRFIATGSIEEKIFQRQSHKQSLSSCVVDSAEDVERH 747 >gi|148823314|ref|YP_001288068.1| helicase helZ [Mycobacterium tuberculosis F11] gi|215403485|ref|ZP_03415666.1| putative helicase helZ [Mycobacterium tuberculosis 02_1987] gi|215411805|ref|ZP_03420597.1| putative helicase helZ [Mycobacterium tuberculosis 94_M4241A] gi|254232263|ref|ZP_04925590.1| helicase helZ [Mycobacterium tuberculosis C] gi|254551134|ref|ZP_05141581.1| putative helicase [Mycobacterium tuberculosis '98-R604 INH-RIF-EM'] gi|260205390|ref|ZP_05772881.1| putative helicase [Mycobacterium tuberculosis K85] gi|289574781|ref|ZP_06455008.1| helicase helZ [Mycobacterium tuberculosis K85] gi|289745376|ref|ZP_06504754.1| helicase helZ [Mycobacterium tuberculosis 02_1987] gi|294997044|ref|ZP_06802735.1| putative helicase [Mycobacterium tuberculosis 210] gi|298525599|ref|ZP_07013008.1| helicase helZ [Mycobacterium tuberculosis 94_M4241A] gi|306784872|ref|ZP_07423194.1| helicase helZ [Mycobacterium tuberculosis SUMu003] gi|306797957|ref|ZP_07436259.1| helicase helZ [Mycobacterium tuberculosis SUMu006] gi|306803836|ref|ZP_07440504.1| helicase helZ [Mycobacterium tuberculosis SUMu008] gi|306808409|ref|ZP_07445077.1| helicase helZ [Mycobacterium tuberculosis SUMu007] gi|306968232|ref|ZP_07480893.1| helicase helZ [Mycobacterium tuberculosis SUMu009] gi|124601322|gb|EAY60332.1| helicase helZ [Mycobacterium tuberculosis C] gi|148721841|gb|ABR06466.1| helicase helZ [Mycobacterium tuberculosis F11] gi|289539212|gb|EFD43790.1| helicase helZ [Mycobacterium tuberculosis K85] gi|289685904|gb|EFD53392.1| helicase helZ [Mycobacterium tuberculosis 02_1987] gi|298495393|gb|EFI30687.1| helicase helZ [Mycobacterium tuberculosis 94_M4241A] gi|308330390|gb|EFP19241.1| helicase helZ [Mycobacterium tuberculosis SUMu003] gi|308341711|gb|EFP30562.1| helicase helZ [Mycobacterium tuberculosis SUMu006] gi|308345201|gb|EFP34052.1| helicase helZ [Mycobacterium tuberculosis SUMu007] gi|308349504|gb|EFP38355.1| helicase helZ [Mycobacterium tuberculosis SUMu008] gi|308354134|gb|EFP42985.1| helicase helZ [Mycobacterium tuberculosis SUMu009] gi|323719315|gb|EGB28456.1| helicase helZ [Mycobacterium tuberculosis CDC1551A] gi|326903713|gb|EGE50646.1| helicase helZ [Mycobacterium tuberculosis W-148] Length = 1013 Score = 110 bits (276), Expect = 1e-22, Method: Composition-based stats. Identities = 36/212 (16%), Positives = 67/212 (31%), Gaps = 25/212 (11%) Query: 3 QYHKFQRELYCDLQGEN--IEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 Y ++ ++ N + K Q+ N ++ K+ LE Sbjct: 780 LYQAVVADMMEKIENTEGIERRGNVLAAMAKLKQVCNHPAQLLHDRSPVGRRSGKVIRLE 839 Query: 61 VIIEKAN--AAPIIVAYHFNSDLARLQKAFP--------------QGRTLDKDPCTIQEW 104 I+E+ ++ F L G + + + Sbjct: 840 EILEEILAEGDRVLCFTQFTEFAELLVPHLAARFGRAARDIAYLHGGTPRKRRDEMVARF 899 Query: 105 NEGK-IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKR 163 G P+ + G GLNL N +V WW+ Q +R + G +R Sbjct: 900 QSGDGPPIFLLSLKAGGTGLNLT-AANHVVHLDRWWNPAVENQATDR-----AFRIGQRR 953 Query: 164 AVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 V V I T++E + + + K + DL++ Sbjct: 954 TVQVRKFICTGTLEEKIDEMIEEKKALADLVV 985 >gi|119489573|ref|ZP_01622333.1| SNF2-related helicase [Lyngbya sp. PCC 8106] gi|119454485|gb|EAW35633.1| SNF2-related helicase [Lyngbya sp. PCC 8106] Length = 1061 Score = 110 bits (276), Expect = 1e-22, Method: Composition-based stats. Identities = 38/221 (17%), Positives = 74/221 (33%), Gaps = 34/221 (15%) Query: 3 QYHKFQRELYCDLQGENIEAFNS--ASKTVKCLQLANGAVYYD-----------EEKHWK 49 Y K + D+ + VK Q+ N + + E + Sbjct: 816 LYQKIVDQSLADIDSAAGIQRRGMILALLVKLKQVCNHPILLNGKATKTGKKKVETQGLS 875 Query: 50 EVHDEKIKALEVIIEK--ANAAPIIVAYHF-------NSDLARLQKA---FPQGRT-LDK 96 K++ + ++E+ + IV F L + F G T +K Sbjct: 876 LQSSGKLQRFKEMLEELLSEGDRAIVFTQFAEWGKVLQPYLEQQLNREVLFLYGATRKNK 935 Query: 97 DPCTIQEWNEGKI--PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 I + + P+ + G GLNL N + F WW+ Q +R+ Sbjct: 936 REEMIDRFQQDPQGPPIFILSLKAGGVGLNLTR-ANHVFHFDRWWNPAVENQATDRVF-- 992 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 + G R V V+ + T++E + + +K + + ++ Sbjct: 993 ---RIGQTRNVQVHKFVCTGTLEEKIHDLIESKKVLAEQVV 1030 >gi|306780129|ref|ZP_07418466.1| helicase helZ [Mycobacterium tuberculosis SUMu002] gi|306789239|ref|ZP_07427561.1| helicase helZ [Mycobacterium tuberculosis SUMu004] gi|306793568|ref|ZP_07431870.1| helicase helZ [Mycobacterium tuberculosis SUMu005] gi|308326957|gb|EFP15808.1| helicase helZ [Mycobacterium tuberculosis SUMu002] gi|308334225|gb|EFP23076.1| helicase helZ [Mycobacterium tuberculosis SUMu004] gi|308338024|gb|EFP26875.1| helicase helZ [Mycobacterium tuberculosis SUMu005] Length = 1013 Score = 110 bits (276), Expect = 1e-22, Method: Composition-based stats. Identities = 36/212 (16%), Positives = 67/212 (31%), Gaps = 25/212 (11%) Query: 3 QYHKFQRELYCDLQGEN--IEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 Y ++ ++ N + K Q+ N ++ K+ LE Sbjct: 780 LYQAVVADMMEKIENTEGIERRGNVLAAMAKLKQVCNHPAQLLHDRSPVGRRSGKVIRLE 839 Query: 61 VIIEKAN--AAPIIVAYHFNSDLARLQKAFP--------------QGRTLDKDPCTIQEW 104 I+E+ ++ F L G + + + Sbjct: 840 EILEEILAEGDRVLCFTQFTEFAELLVPHLAARFGRAARDIAYLHGGTPRKRRDEMVARF 899 Query: 105 NEGK-IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKR 163 G P+ + G GLNL N +V WW+ Q +R + G +R Sbjct: 900 QSGDGPPIFLLSLKAGGTGLNLT-AANHVVHLDRWWNPAVENQATDR-----AFRIGQRR 953 Query: 164 AVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 V V I T++E + + + K + DL++ Sbjct: 954 TVQVRKFICTGTLEEKIDEMIEEKKALADLVV 985 >gi|148262677|ref|YP_001229383.1| non-specific serine/threonine protein kinase [Geobacter uraniireducens Rf4] gi|146396177|gb|ABQ24810.1| Non-specific serine/threonine protein kinase [Geobacter uraniireducens Rf4] Length = 898 Score = 110 bits (276), Expect = 1e-22, Method: Composition-based stats. Identities = 35/213 (16%), Positives = 73/213 (34%), Gaps = 23/213 (10%) Query: 2 KQYHKFQRELYCDLQGENIEAFN---SASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKA 58 + Y + +EL L+ + S ++ Q+ N + + E K Sbjct: 666 RLYGQSVKELAEALREQQEGMKRRGLILSSLMRFKQICNHPGQALGDGDYAEERSGKFVR 725 Query: 59 LEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQ-----------GRTLDKDPCTIQEWN 105 L + E+ + +++ F A + G + + + + Sbjct: 726 LRELAEEIASRQEKVLIFTQFREMTAPIATFLATLFGRPGLVLHGGTPVAERKKLVDRFQ 785 Query: 106 EGK-IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA 164 P + G GLNL + ++ F WW+ Q +R + G K+ Sbjct: 786 HEDGPPFFVLSLKAGGSGLNLT-AASHVIHFDRWWNPAVENQATDR-----AFRIGQKKN 839 Query: 165 VFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 V V+ + + T++E + + KS + LL+ Sbjct: 840 VMVHKFVCKGTVEEKIDALIAAKSGMATELLDG 872 >gi|198473012|ref|XP_001356143.2| GA17651 [Drosophila pseudoobscura pseudoobscura] gi|292630937|sp|Q29KH2|RAD54_DROPS RecName: Full=DNA repair and recombination protein RAD54-like; AltName: Full=Protein okra gi|198139260|gb|EAL33203.2| GA17651 [Drosophila pseudoobscura pseudoobscura] Length = 782 Score = 110 bits (276), Expect = 1e-22, Method: Composition-based stats. Identities = 32/173 (18%), Positives = 69/173 (39%), Gaps = 21/173 (12%) Query: 39 AVYYDEEKHWKEVHDEKIKALEVI---IEKANAAPIIVAYHFNSDLARLQKAFPQGR--- 92 + Y+ + K K L+ + I +++ ++ L ++ + + Sbjct: 482 PINYNPKGEINPELSGKFKLLDFMLAAIRAHGNDKVVLISNYTQTLDLFEQLARKRKYGF 541 Query: 93 -------TLDKDPCTIQEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEE 143 ++ K + +N+ L + G GLNL G N L F W+ Sbjct: 542 VRLDGTMSIKKRSKVVDRFNDPESDCFLFMLSSKAGGCGLNL-IGANRLFMFDPDWNPAN 600 Query: 144 HQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 +Q + R+ + G K+ ++Y L+A +I+E +LQR K ++ +++ Sbjct: 601 DEQAMARVW-----RDGQKKPCYIYRLVASGSIEEKILQRQTHKKSLSSTIID 648 >gi|156039515|ref|XP_001586865.1| hypothetical protein SS1G_11894 [Sclerotinia sclerotiorum 1980] gi|154697631|gb|EDN97369.1| hypothetical protein SS1G_11894 [Sclerotinia sclerotiorum 1980 UF-70] Length = 861 Score = 110 bits (276), Expect = 1e-22, Method: Composition-based stats. Identities = 38/175 (21%), Positives = 73/175 (41%), Gaps = 21/175 (12%) Query: 45 EKHWKEVHDEKIKALEVI---IEKANAAPIIVAYHFN---SDLARLQKAFPQGRTL---- 94 ++ K + K++ L+ + I + I++ ++ +L + G Sbjct: 609 DRDIKPWYSGKMQVLDRMLARIRQDTNDKIVLISNYTQTLDMFDKLCRNRGYGSLRLDGT 668 Query: 95 ---DKDPCTIQEWNE--GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIE 149 K + ++N+ G+ + + G GLNL G N LV F W+ QQ + Sbjct: 669 MNVTKRQKLVDKFNDPDGQEFVFLLSSKAGGCGLNL-IGANRLVLFDPDWNPAADQQALA 727 Query: 150 RIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIH 204 R+ + G K+ FVY IA TI+E + QR K ++ ++++ + H Sbjct: 728 RVW-----RDGQKKDCFVYRFIATGTIEEKIFQRQSHKQSLSSCVVDSAEDVERH 777 >gi|90961729|ref|YP_535645.1| Phage helicase [Lactobacillus phage Sal1] gi|90820923|gb|ABD99562.1| Phage helicase [Lactobacillus phage Sal1] gi|300214512|gb|ADJ78928.1| Phage helicase [Lactobacillus salivarius CECT 5713] Length = 407 Score = 110 bits (276), Expect = 1e-22, Method: Composition-based stats. Identities = 36/198 (18%), Positives = 78/198 (39%), Gaps = 23/198 (11%) Query: 4 YHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVII 63 Y KF ++ Y + + + + + + QL+ EK+ L +I Sbjct: 226 YRKFLKDKYLEFDNQELLGDTALTYLLGLRQLSG------------MYSKEKLDRLSDLI 273 Query: 64 EKANAAPIIVAYHFNSDLARL----QKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASC 119 + +I+ Y+F +L + + ++ + + + + Sbjct: 274 DSTEDR-LIIFYNFERELDEIVKIAKNKIRPISIVNGKTKNLTNYETKDNSITLIQYQAG 332 Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 GLNLQ N +V+F+ E ++Q +RI + G +R+ F Y LI + +++E Sbjct: 333 SMGLNLQK-ANKIVYFTPPQQSELYEQSKKRI-----HRIGQERSCFYYNLIVEKSVEER 386 Query: 180 VLQRLRTKSTIQDLLLNA 197 + + L+ + D L + Sbjct: 387 IYRALKERRDYTDELFKS 404 >gi|311740659|ref|ZP_07714486.1| SNF2 family superfamily II DNA/RNA helicase [Corynebacterium pseudogenitalium ATCC 33035] gi|311304179|gb|EFQ80255.1| SNF2 family superfamily II DNA/RNA helicase [Corynebacterium pseudogenitalium ATCC 33035] Length = 1011 Score = 110 bits (275), Expect = 1e-22, Method: Composition-based stats. Identities = 41/216 (18%), Positives = 77/216 (35%), Gaps = 30/216 (13%) Query: 2 KQYHKFQRELYCDLQGENIEAFN----SASKTVKCLQLANG-AVYYDEEKHWKEVHDE-- 54 Y ++ DLQ N + + Q+ N A Y + Sbjct: 779 ALYKALVNQVKKDLQ--EATGINKRGLVLASLTRIKQICNHPAHYLGDNSPVTLKGKHRS 836 Query: 55 -KIKALEVIIEKAN--AAPIIVAYHFNSDLARLQKAFPQ-----------GRTLDKDPCT 100 K+K L I+++A ++V + + LQ G + +K Sbjct: 837 GKVKELMRIVDEATESGERLLVFTQYKAFGDILQPYLSDQLGREIPFLHGGVSKNKRDQM 896 Query: 101 IQEWNEGK-IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQA 159 ++++ P + + G GLNL +I+V WW+ Q +R + Sbjct: 897 VEDFQSEDGPPAMILSLKAGGTGLNLT-AASIVVHMDRWWNPAVENQATDR-----AFRI 950 Query: 160 GFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 G +R V VY +I T++E + L K+ + ++ Sbjct: 951 GQRRNVQVYKMITAGTLEESIQDILDGKTQLAGAVV 986 >gi|255324485|ref|ZP_05365602.1| DNA/RNA helicase, SNF2 family [Corynebacterium tuberculostearicum SK141] gi|255298391|gb|EET77691.1| DNA/RNA helicase, SNF2 family [Corynebacterium tuberculostearicum SK141] Length = 1011 Score = 110 bits (275), Expect = 1e-22, Method: Composition-based stats. Identities = 41/216 (18%), Positives = 77/216 (35%), Gaps = 30/216 (13%) Query: 2 KQYHKFQRELYCDLQGENIEAFN----SASKTVKCLQLANG-AVYYDEEKHWKEVHDE-- 54 Y ++ DLQ N + + Q+ N A Y + Sbjct: 779 ALYKALVNQVKKDLQ--EATGINKRGLVLASLTRIKQICNHPAHYLGDNSPVTLKGKHRS 836 Query: 55 -KIKALEVIIEKAN--AAPIIVAYHFNSDLARLQKAFPQ-----------GRTLDKDPCT 100 K+K L I+++A ++V + + LQ G + +K Sbjct: 837 GKVKELMRIVDEATESGERLLVFTQYKAFGDILQPYLSDQLGRDIPFLHGGVSKNKRDQM 896 Query: 101 IQEWNEGK-IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQA 159 ++++ P + + G GLNL +I+V WW+ Q +R + Sbjct: 897 VEDFQSEDGPPAMILSLKAGGTGLNLT-AASIVVHMDRWWNPAVENQATDR-----AFRI 950 Query: 160 GFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 G +R V VY +I T++E + L K+ + ++ Sbjct: 951 GQRRNVQVYKMITAGTLEESIQDILDGKTQLAGAVV 986 >gi|226293396|gb|EEH48816.1| DNA repair and recombination protein RAD54 [Paracoccidioides brasiliensis Pb18] Length = 863 Score = 110 bits (275), Expect = 1e-22, Method: Composition-based stats. Identities = 38/159 (23%), Positives = 67/159 (42%), Gaps = 19/159 (11%) Query: 58 ALEVIIEKANAAPIIVAYHFNSDL---ARLQKAFPQGRTL-------DKDPCTIQEWN-- 105 L I + N +++ ++ L RL ++ G K + ++N Sbjct: 624 MLARIRQDTNDKIVLI-SNYTQTLDLFERLCRSRQYGCLRLDGSMNVTKRQKLVDKFNDP 682 Query: 106 EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 EG+ + + G G+NL G N LV F W+ QQ + R+ + G K+ Sbjct: 683 EGEEFVFLLSSKAGGCGINL-IGANRLVLFDPDWNPAADQQALARVW-----RDGQKKDC 736 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIH 204 FVY IA TI+E + QR K ++ ++++ + H Sbjct: 737 FVYRFIATGTIEEKIFQRQSHKQSLSSCVVDSAEDVERH 775 >gi|295664715|ref|XP_002792909.1| SNF2 family N-terminal domain containing protein [Paracoccidioides brasiliensis Pb01] gi|226278430|gb|EEH33996.1| SNF2 family N-terminal domain containing protein [Paracoccidioides brasiliensis Pb01] Length = 682 Score = 110 bits (275), Expect = 1e-22, Method: Composition-based stats. Identities = 38/159 (23%), Positives = 67/159 (42%), Gaps = 19/159 (11%) Query: 58 ALEVIIEKANAAPIIVAYHFNSDL---ARLQKAFPQGRTL-------DKDPCTIQEWN-- 105 L I + N +++ ++ L RL ++ G K + ++N Sbjct: 443 MLARIRQDTNDKIVLI-SNYTQTLDLFERLCRSRQYGCLRLDGSMNVTKRQKLVDKFNDP 501 Query: 106 EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 EG+ + + G G+NL G N LV F W+ QQ + R+ + G K+ Sbjct: 502 EGEEFVFLLSSKAGGCGINL-IGANRLVLFDPDWNPAADQQALARVW-----RDGQKKDC 555 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIH 204 FVY IA TI+E + QR K ++ ++++ + H Sbjct: 556 FVYRFIATGTIEEKIFQRQSHKQSLSSCVVDSAEDVERH 594 >gi|225684006|gb|EEH22290.1| DNA repair and recombination protein RAD54 [Paracoccidioides brasiliensis Pb03] Length = 821 Score = 110 bits (275), Expect = 1e-22, Method: Composition-based stats. Identities = 38/159 (23%), Positives = 67/159 (42%), Gaps = 19/159 (11%) Query: 58 ALEVIIEKANAAPIIVAYHFNSDL---ARLQKAFPQGRTL-------DKDPCTIQEWN-- 105 L I + N +++ ++ L RL ++ G K + ++N Sbjct: 582 MLARIRQDTNDKIVLI-SNYTQTLDLFERLCRSRQYGCLRLDGSMNVTKRQKLVDKFNDP 640 Query: 106 EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 EG+ + + G G+NL G N LV F W+ QQ + R+ + G K+ Sbjct: 641 EGEEFVFLLSSKAGGCGINL-IGANRLVLFDPDWNPAADQQALARVW-----RDGQKKDC 694 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIH 204 FVY IA TI+E + QR K ++ ++++ + H Sbjct: 695 FVYRFIATGTIEEKIFQRQSHKQSLSSCVVDSAEDVERH 733 >gi|306835829|ref|ZP_07468826.1| SNF2/RAD54 family protein [Corynebacterium accolens ATCC 49726] gi|304568303|gb|EFM43871.1| SNF2/RAD54 family protein [Corynebacterium accolens ATCC 49726] Length = 1009 Score = 110 bits (275), Expect = 1e-22, Method: Composition-based stats. Identities = 41/214 (19%), Positives = 76/214 (35%), Gaps = 26/214 (12%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASK--TVKCLQLANGAVYY---DEEKHWKEVH-DEK 55 Y E+ L+ + + Q+ N +Y D K H K Sbjct: 777 ALYKALVNEVKKSLEDATGISKRGIVLASLTRIKQICNHPAHYLGDDSPVVIKGKHRSGK 836 Query: 56 IKALEVIIEKAN--AAPIIVAYHFNSDLARLQKAFPQ-----------GRTLDKDPCTIQ 102 +K L I++ A +++ + + LQ G T +K ++ Sbjct: 837 VKELMRIVDAATESGERLLIFTQYKAFGDILQPYLSGQLGHEIPFLHGGVTKNKRDQMVE 896 Query: 103 EWNEGKIP-LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGF 161 ++ P + + G GLNL +I+V WW+ Q +R + G Sbjct: 897 DFQSEDGPQAMILSLKAGGTGLNLT-AASIVVHMDRWWNPAVENQATDR-----AFRIGQ 950 Query: 162 KRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 +R V VY +I T++E + L K+ + ++ Sbjct: 951 RRNVQVYKMITAGTLEESIQDILDGKTQLAGAVV 984 >gi|253745191|gb|EET01274.1| Transcriptional activator, putative [Giardia intestinalis ATCC 50581] Length = 1837 Score = 110 bits (275), Expect = 1e-22, Method: Composition-based stats. Identities = 31/163 (19%), Positives = 73/163 (44%), Gaps = 19/163 (11%) Query: 52 HDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQK----------AFPQGRTLDKDPC 99 K+ AL+ ++ P+++ L L+ G ++K Sbjct: 1642 DSGKLIALDKLLHNLYKTREPVLIYCQMTKMLDLLEDYLVFRRYNYVRLDGGDAVNKRGQ 1701 Query: 100 TIQEW-NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQ 158 ++ + + I + + GLNL + ++F+ W+ + Q ++R+ + Sbjct: 1702 IVERFMTDDTIFVFLLSTRAASLGLNLTR-ASTVIFYENDWNPTQDAQAMDRV-----HR 1755 Query: 159 AGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 G K++V +Y L+ + +IDE +L++ R+K +Q+L+L +++ Sbjct: 1756 LGQKKSVVIYRLVTEGSIDEKILEKARSKEIVQELVLRGQRRD 1798 >gi|322503893|emb|CBZ38979.1| unnamed protein product [Leishmania donovani BPK282A1] Length = 1285 Score = 110 bits (275), Expect = 1e-22, Method: Composition-based stats. Identities = 34/162 (20%), Positives = 72/162 (44%), Gaps = 19/162 (11%) Query: 55 KIKALEVIIEKA--NAAPIIVAYHFNSDLARLQKAF---------PQGRTLDK-DPCTIQ 102 K++ LE ++K +++ F L L++ G T + + Sbjct: 870 KLQFLETALKKMRDEGHRMLIFTQFVHMLNILERFLALIGIVYTRLDGSTKAELRQQYVD 929 Query: 103 EWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGF 161 +N + +I + S G GLNL G + ++F+ W+ Q +R + G Sbjct: 930 RFNADPRITCMILSTRSGGIGLNLT-GADTVIFYDSDWNPTIDLQAQDRC-----HRIGQ 983 Query: 162 KRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETI 203 R V +Y LI+++T++E +L++ R + + ++++ + TI Sbjct: 984 TRPVTIYRLISEHTVEESILEKARERKKLNNVVIRGGQFHTI 1025 >gi|116198517|ref|XP_001225070.1| hypothetical protein CHGG_07414 [Chaetomium globosum CBS 148.51] gi|88178693|gb|EAQ86161.1| hypothetical protein CHGG_07414 [Chaetomium globosum CBS 148.51] Length = 1727 Score = 110 bits (275), Expect = 1e-22, Method: Composition-based stats. Identities = 27/162 (16%), Positives = 62/162 (38%), Gaps = 19/162 (11%) Query: 47 HWKEVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQKAF---------PQGRTL- 94 H K+ L+ ++ + +++ + + +++ G T Sbjct: 1434 HRFVTDSGKLAKLDELLRQLKEGGHRVLLYFQMTRMIDMMEEYLTYRNYKYCRLDGSTKL 1493 Query: 95 -DKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGV 153 D+ +I + + G G+NL + ++F+ W+ Q ++R Sbjct: 1494 EDRRDTVADFQTRPEIFIFLLSTRAGGLGINLTT-ADTVIFYDSDWNPTIDSQAMDR--- 1549 Query: 154 TRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 + G + V VY LI + TI+E + +R K +Q +++ Sbjct: 1550 --AHRLGQTKQVTVYRLITRGTIEERIRKRAMQKEEVQRVVI 1589 >gi|296411575|ref|XP_002835506.1| hypothetical protein [Tuber melanosporum Mel28] gi|295629290|emb|CAZ79663.1| unnamed protein product [Tuber melanosporum] Length = 812 Score = 110 bits (275), Expect = 1e-22, Method: Composition-based stats. Identities = 39/192 (20%), Positives = 78/192 (40%), Gaps = 30/192 (15%) Query: 37 NGAVYYDE---------EKHWKEVHDEKIKALEVI---IEKANAAPIIVAYHFNSDL--- 81 ++Y D+ ++ K + K+ L+ + I++ I++ ++ L Sbjct: 543 CESLYPDDYVPKDARGRDREVKVWYSGKMMVLDRMLARIQRETKDKIVLISNYTQTLDVF 602 Query: 82 ARLQKAFPQGRTL-------DKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNIL 132 +L ++ G K + ++N+ + + G G+NL G N L Sbjct: 603 EKLCRSRGYGALRLDGTMNGSKRTKLVAKFNDPDSEEFVFLLSSKAGGCGINL-IGANRL 661 Query: 133 VFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQD 192 V F W+ QQ + R+ + G K+ FVY IA TI+E + QR K ++ Sbjct: 662 VLFDPDWNPAADQQALARVW-----RDGQKKDCFVYRFIATGTIEEKIFQRQSHKQSLST 716 Query: 193 LLLNALKKETIH 204 +++ ++ H Sbjct: 717 SVVDGVEDVERH 728 >gi|6321275|ref|NP_011352.1| Rad54p [Saccharomyces cerevisiae S288c] gi|417577|sp|P32863|RAD54_YEAST RecName: Full=DNA repair and recombination protein RAD54 gi|172343|gb|AAA34949.1| recombination and repair protein [Saccharomyces cerevisiae] gi|728692|emb|CAA88534.1| RAD54 [Saccharomyces cerevisiae] gi|1322760|emb|CAA96875.1| RAD54 [Saccharomyces cerevisiae] gi|285812049|tpg|DAA07949.1| TPA: Rad54p [Saccharomyces cerevisiae S288c] Length = 898 Score = 110 bits (275), Expect = 1e-22, Method: Composition-based stats. Identities = 34/167 (20%), Positives = 69/167 (41%), Gaps = 21/167 (12%) Query: 46 KHWKEVHDEKIKALEVI---IEKANAAPIIVAYHFNSDLARLQK----------AFPQGR 92 + + + K LE I+ + I++ ++ L ++K Sbjct: 647 RDVQTKYSAKFSILERFLHKIKTESDDKIVLISNYTQTLDLIEKMCRYKHYSAVRLDGTM 706 Query: 93 TLDKDPCTIQEWN--EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 +++K + +N EG+ + + G G+NL G N L+ W+ QQ + R Sbjct: 707 SINKRQKLVDRFNDPEGQEFIFLLSSKAGGCGINL-IGANRLILMDPDWNPAADQQALAR 765 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + + G K+ F+Y I+ TI+E + QR K ++ +++A Sbjct: 766 VW-----RDGQKKDCFIYRFISTGTIEEKIFQRQSMKMSLSSCVVDA 807 >gi|297561233|ref|YP_003680207.1| SNF2-related protein [Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111] gi|296845681|gb|ADH67701.1| SNF2-related protein [Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111] Length = 1033 Score = 110 bits (275), Expect = 1e-22, Method: Composition-based stats. Identities = 36/206 (17%), Positives = 65/206 (31%), Gaps = 22/206 (10%) Query: 3 QYHKFQRELYCDLQGENIEAFNSASKTV--KCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 Y E+ L + + Q+ N + + K++ +E Sbjct: 803 LYKAVVDEMGERLAEATEKERKGLVLATMSRLKQICNHPAQFLGDGSALSGRSGKLERVE 862 Query: 61 VIIEKA--NAAPIIVAYHFNSDLARLQKAFP-----------QGRTLDKDPCTIQEWNEG 107 I+ A + + RL G + Q + E Sbjct: 863 AILASAAAEGDKALCFTQYARFGERLAPYLRSRLGVPVLWLHGGTPRAEREEMTQRFQEM 922 Query: 108 KIP-LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVF 166 + P + + G GLNL N +V WW+ Q +R + G +R V Sbjct: 923 EGPAVFLLSLKAAGTGLNLT-AANHVVHVDRWWNPAVENQATDR-----AFRIGQRRDVQ 976 Query: 167 VYYLIAQNTIDELVLQRLRTKSTIQD 192 V ++ T++E V + + KS + D Sbjct: 977 VRKMVCVGTVEERVDEMIERKSALAD 1002 >gi|258510998|ref|YP_003184432.1| SNF2-like protein [Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446] gi|257477724|gb|ACV58043.1| SNF2-related protein [Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446] Length = 949 Score = 110 bits (275), Expect = 1e-22, Method: Composition-based stats. Identities = 36/211 (17%), Positives = 75/211 (35%), Gaps = 25/211 (11%) Query: 2 KQYHKFQRELYCDL-QGENIEAFNSASKT--VKCLQLANGAVYYDEEKHWKEVHDEKIKA 58 Y ++ + +G + A A T ++ Q+ + K+++ Sbjct: 713 AMYQALVDRMFAQIARGPSAMARRGAILTTLLRLKQVCDHPALI-SGGRPSVKRSGKLRS 771 Query: 59 LEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQ-----------GRTLDKDPCTIQEWN 105 L ++ ++ F L A G + ++++ Sbjct: 772 LLDLLRVVVDGGEAALIFTQFREMGEMLCAAVEDELGFRPVFLHGGMSAKARGEIVEQYQ 831 Query: 106 EGKI--PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKR 163 G++ P+L + G GLNL N + + WW+ Q +R + G R Sbjct: 832 AGRMASPVLILSLRAGGVGLNLTR-ANHVFHYDRWWNPAVEDQATDR-----AYRIGQLR 885 Query: 164 AVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 V V+ +I T++E + + LR K + D++ Sbjct: 886 GVEVHKMICVGTLEERIDEMLRAKRALSDVV 916 >gi|157130680|ref|XP_001661961.1| steroid receptor-interacting snf2 domain protein [Aedes aegypti] gi|108881922|gb|EAT46147.1| steroid receptor-interacting snf2 domain protein [Aedes aegypti] Length = 791 Score = 110 bits (275), Expect = 1e-22, Method: Composition-based stats. Identities = 33/153 (21%), Positives = 62/153 (40%), Gaps = 18/153 (11%) Query: 56 IKALEVIIEKANAAPIIVAYHFNSDLARLQK----------AFPQGRTLDKDPCTIQEWN 105 + + I+ I++ ++ L +K T+ K + E+N Sbjct: 490 LDCMLASIKMNTDDKIVLVSNYTQTLDLFEKLCRKRGYCYVRLDGSMTIKKRGKVVDEFN 549 Query: 106 EGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKR 163 + + + G GLNL G N LV F W+ +Q + R+ + G K+ Sbjct: 550 KPDSKEFIFMLSSKAGGCGLNL-IGANRLVMFDPDWNPANDEQAMARVW-----RDGQKK 603 Query: 164 AVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 F+Y L+A TI+E + QR K + + +++ Sbjct: 604 PCFIYRLLATGTIEEKIFQRQTHKKALSNTVVD 636 >gi|258568006|ref|XP_002584747.1| DNA repair and recombination protein RAD54 [Uncinocarpus reesii 1704] gi|237906193|gb|EEP80594.1| DNA repair and recombination protein RAD54 [Uncinocarpus reesii 1704] Length = 1534 Score = 110 bits (275), Expect = 1e-22, Method: Composition-based stats. Identities = 37/173 (21%), Positives = 68/173 (39%), Gaps = 18/173 (10%) Query: 44 EEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDL---ARLQKAFPQGRTL------ 94 + K W + + I + I++ ++ L RL ++ G Sbjct: 414 DVKSWYSGKMMVLDRMLARIRQDTNDKIVLISNYTQTLDLFERLCRSRGYGSLRLDGTMN 473 Query: 95 -DKDPCTIQEWN--EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERI 151 K + ++N G+ + + G G+NL G N LV F W+ QQ + R+ Sbjct: 474 VKKRQKLVDKFNDPNGEEFVFLLSSKAGGCGINL-VGANRLVLFDPDWNPAADQQALARV 532 Query: 152 GVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIH 204 + G K+ FVY IA +I+E + QR K + ++++ + H Sbjct: 533 W-----RDGQKKDCFVYRFIATGSIEEKIFQRQSHKQLLSSCVVDSAEDVERH 580 >gi|320039340|gb|EFW21274.1| SNF2 family domain-containing protein [Coccidioides posadasii str. Silveira] Length = 797 Score = 110 bits (275), Expect = 1e-22, Method: Composition-based stats. Identities = 36/173 (20%), Positives = 67/173 (38%), Gaps = 18/173 (10%) Query: 44 EEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQK----------AFPQGRT 93 + K W + + I + I++ ++ L +K T Sbjct: 543 DVKSWYSGKMMVLDRMLARIRQDTNDKIVLISNYTQTLDLFEKLCRSRGYGSLRLDGTMT 602 Query: 94 LDKDPCTIQEWNE--GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERI 151 + K + +N+ G+ + + G G+NL G N LV F W+ QQ + R+ Sbjct: 603 VKKRQKLVDRFNDPDGEEFVFLLSSKAGGCGINL-VGANRLVLFDPDWNPAADQQALARV 661 Query: 152 GVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIH 204 + G K+ FVY IA +I+E + QR K + ++++ + H Sbjct: 662 W-----RDGQKKDCFVYRFIATGSIEEKIFQRQSHKQLLSSCVVDSAEDVERH 709 >gi|303311053|ref|XP_003065538.1| DNA repair protein rhp54, putative [Coccidioides posadasii C735 delta SOWgp] gi|240105200|gb|EER23393.1| DNA repair protein rhp54, putative [Coccidioides posadasii C735 delta SOWgp] Length = 799 Score = 110 bits (275), Expect = 1e-22, Method: Composition-based stats. Identities = 36/173 (20%), Positives = 67/173 (38%), Gaps = 18/173 (10%) Query: 44 EEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQK----------AFPQGRT 93 + K W + + I + I++ ++ L +K T Sbjct: 545 DVKSWYSGKMMVLDRMLARIRQDTNDKIVLISNYTQTLDLFEKLCRSRGYGSLRLDGTMT 604 Query: 94 LDKDPCTIQEWNE--GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERI 151 + K + +N+ G+ + + G G+NL G N LV F W+ QQ + R+ Sbjct: 605 VKKRQKLVDRFNDPDGEEFVFLLSSKAGGCGINL-VGANRLVLFDPDWNPAADQQALARV 663 Query: 152 GVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIH 204 + G K+ FVY IA +I+E + QR K + ++++ + H Sbjct: 664 W-----RDGQKKDCFVYRFIATGSIEEKIFQRQSHKQLLSSCVVDSAEDVERH 711 >gi|194760847|ref|XP_001962644.1| GF14336 [Drosophila ananassae] gi|292630861|sp|B3MMA5|RAD54_DROAN RecName: Full=DNA repair and recombination protein RAD54-like; AltName: Full=Protein okra gi|190616341|gb|EDV31865.1| GF14336 [Drosophila ananassae] Length = 791 Score = 110 bits (275), Expect = 1e-22, Method: Composition-based stats. Identities = 30/146 (20%), Positives = 62/146 (42%), Gaps = 18/146 (12%) Query: 63 IEKANAAPIIVAYHFNSDLARLQKAFPQGR----------TLDKDPCTIQEWNEGK--IP 110 I A +++ ++ L ++ + + ++ K + ++N+ Sbjct: 514 IRAAGNDKVVLISNYTQTLDLFEQLARKRKYGFVRLDGTMSIKKRSKVVDKFNDPDSECF 573 Query: 111 LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYL 170 L + G GLNL G N L F W+ +Q + R+ + G K+ ++Y L Sbjct: 574 LFMLSSKAGGCGLNL-IGANRLFMFDPDWNPANDEQAMARVW-----RDGQKKPCYIYRL 627 Query: 171 IAQNTIDELVLQRLRTKSTIQDLLLN 196 +A TI+E +LQR K ++ +++ Sbjct: 628 VASGTIEEKILQRQTHKKSLSSTIID 653 >gi|119194699|ref|XP_001247953.1| hypothetical protein CIMG_01724 [Coccidioides immitis RS] Length = 846 Score = 110 bits (275), Expect = 1e-22, Method: Composition-based stats. Identities = 36/173 (20%), Positives = 67/173 (38%), Gaps = 18/173 (10%) Query: 44 EEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQK----------AFPQGRT 93 + K W + + I + I++ ++ L +K T Sbjct: 530 DVKSWYSGKMMVLDRMLARIRQDTNDKIVLISNYTQTLDLFEKLCRSRGYGSLRLDGTMT 589 Query: 94 LDKDPCTIQEWNE--GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERI 151 + K + +N+ G+ + + G G+NL G N LV F W+ QQ + R+ Sbjct: 590 VKKRQKLVDRFNDPDGEEFVFLLSSKAGGCGINL-VGANRLVLFDPDWNPAADQQALARV 648 Query: 152 GVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIH 204 + G K+ FVY IA +I+E + QR K + ++++ + H Sbjct: 649 W-----RDGQKKDCFVYRFIATGSIEEKIFQRQSHKQLLSSCVVDSAEDVERH 696 >gi|326427315|gb|EGD72885.1| hypothetical protein PTSG_12193 [Salpingoeca sp. ATCC 50818] Length = 2049 Score = 110 bits (275), Expect = 1e-22, Method: Composition-based stats. Identities = 31/168 (18%), Positives = 65/168 (38%), Gaps = 20/168 (11%) Query: 43 DEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRT------- 93 DE K+ ++ ++ K A+ +++ + L L+ F + Sbjct: 1398 DETMERLVKASGKLLLMDKMLTKLKASGHRVLIFSQWTHVLDILEDLFVYRKHKFYRLDG 1457 Query: 94 ---LDKDPCTIQEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMI 148 + I ++N + + G G+NL + + + W+ Q I Sbjct: 1458 DTDILDREQRITDFNRPNSDVFAFLLSTRAGGLGINL-NTADTVFIYDSDWNPHMDNQAI 1516 Query: 149 ERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 R + G KR V VY L+A+ T+DE ++++ R K + + ++ Sbjct: 1517 AR-----AHRIGQKRLVMVYRLVAKGTVDEKIVEQARKKLALDEAVVE 1559 >gi|190407107|gb|EDV10374.1| DNA repair and recombination protein RAD54 [Saccharomyces cerevisiae RM11-1a] Length = 898 Score = 110 bits (275), Expect = 1e-22, Method: Composition-based stats. Identities = 34/167 (20%), Positives = 69/167 (41%), Gaps = 21/167 (12%) Query: 46 KHWKEVHDEKIKALEVI---IEKANAAPIIVAYHFNSDLARLQK----------AFPQGR 92 + + + K LE I+ + I++ ++ L ++K Sbjct: 647 RDVQTKYSAKFSILERFLHKIKTESDDKIVLISNYTQTLDLIEKMCRYKHYSAVRLDGTM 706 Query: 93 TLDKDPCTIQEWN--EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 +++K + +N EG+ + + G G+NL G N L+ W+ QQ + R Sbjct: 707 SINKRQKLVDRFNDPEGQEFIFLLSSKAGGCGINL-IGANRLILMDPDWNPAADQQALAR 765 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + + G K+ F+Y I+ TI+E + QR K ++ +++A Sbjct: 766 VW-----RDGQKKDCFIYRFISTGTIEEKIFQRQSMKMSLSSCVVDA 807 >gi|151943650|gb|EDN61960.1| radiation sensitive protein [Saccharomyces cerevisiae YJM789] Length = 898 Score = 110 bits (275), Expect = 1e-22, Method: Composition-based stats. Identities = 34/167 (20%), Positives = 69/167 (41%), Gaps = 21/167 (12%) Query: 46 KHWKEVHDEKIKALEVI---IEKANAAPIIVAYHFNSDLARLQK----------AFPQGR 92 + + + K LE I+ + I++ ++ L ++K Sbjct: 647 RDVQTKYSAKFSILERFLHKIKTESDDKIVLISNYTQTLDLIEKMCRYKHYSAVRLDGTM 706 Query: 93 TLDKDPCTIQEWN--EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 +++K + +N EG+ + + G G+NL G N L+ W+ QQ + R Sbjct: 707 SINKRQKLVDRFNDPEGQEFIFLLSSKAGGCGINL-IGANRLILMDPDWNPAADQQALAR 765 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + + G K+ F+Y I+ TI+E + QR K ++ +++A Sbjct: 766 VW-----RDGQKKDCFIYRFISTGTIEEKIFQRQSMKMSLSSCVVDA 807 >gi|149238896|ref|XP_001525324.1| hypothetical protein LELG_03252 [Lodderomyces elongisporus NRRL YB-4239] gi|206558165|sp|A5E0W5|INO80_LODEL RecName: Full=Putative DNA helicase ino80 gi|146450817|gb|EDK45073.1| hypothetical protein LELG_03252 [Lodderomyces elongisporus NRRL YB-4239] Length = 1575 Score = 110 bits (275), Expect = 1e-22, Method: Composition-based stats. Identities = 32/164 (19%), Positives = 67/164 (40%), Gaps = 20/164 (12%) Query: 53 DEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQK----------AFPQGRTLDKDPCT 100 K+ L+ ++ K +++ + + +++ LD Sbjct: 1310 SGKLAKLDELLVKLKQEDHRVLIYFQMTKMMDLMEEYLTFKQHKYIRLDGSSKLDDRRDL 1369 Query: 101 IQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQA 159 + +W + +I + + G G+NL + +VF+ W+ Q ++R + Sbjct: 1370 VHDWQTKPEIFVFLLSTRAGGLGINLT-AADTVVFYDSDWNPTIDSQAMDR-----AHRL 1423 Query: 160 GFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETI 203 G R V VY L+ +NTI+E + R + K +Q +++ K TI Sbjct: 1424 GQTRQVTVYRLLTRNTIEERMRDRAKQKEQVQQVVMEG-KATTI 1466 >gi|159130376|gb|EDP55489.1| dsDNA-dependent ATPase Rad54, putative [Aspergillus fumigatus A1163] Length = 681 Score = 110 bits (275), Expect = 1e-22, Method: Composition-based stats. Identities = 36/173 (20%), Positives = 68/173 (39%), Gaps = 18/173 (10%) Query: 44 EEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQK----------AFPQGRT 93 + K W + + I + I++ ++ L +K Sbjct: 427 DIKSWYSGKMMVLDRMLARIRQDTNDKIVLISNYTQTLDLFEKLCRSRGYGSLRLDGTMN 486 Query: 94 LDKDPCTIQEWNE--GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERI 151 ++K + ++N G+ + + G GLNL G N LV F W+ QQ + R+ Sbjct: 487 INKRQKLVDKFNNPDGEEFVFLLSSKAGGCGLNL-IGANRLVLFDPDWNPAADQQALARV 545 Query: 152 GVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIH 204 + G K+ FVY IA +I+E + QR K ++ ++++ + H Sbjct: 546 W-----RDGQKKDCFVYRFIATGSIEEKIFQRQSHKQSLSSCVVDSAEDVERH 593 >gi|15841592|ref|NP_336629.1| Snf2/Rad54 family helicase [Mycobacterium tuberculosis CDC1551] gi|13881841|gb|AAK46443.1| helicase, SNF2/RAD54 family [Mycobacterium tuberculosis CDC1551] Length = 954 Score = 110 bits (275), Expect = 1e-22, Method: Composition-based stats. Identities = 36/212 (16%), Positives = 67/212 (31%), Gaps = 25/212 (11%) Query: 3 QYHKFQRELYCDLQGEN--IEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 Y ++ ++ N + K Q+ N ++ K+ LE Sbjct: 721 LYQAVVADMMEKIENTEGIERRGNVLAAMAKLKQVCNHPAQLLHDRSPVGRRSGKVIRLE 780 Query: 61 VIIEKAN--AAPIIVAYHFNSDLARLQKAFP--------------QGRTLDKDPCTIQEW 104 I+E+ ++ F L G + + + Sbjct: 781 EILEEILAEGDRVLCFTQFTEFAELLVPHLAARFGRAARDIAYLHGGTPRKRRDEMVARF 840 Query: 105 NEGK-IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKR 163 G P+ + G GLNL N +V WW+ Q +R + G +R Sbjct: 841 QSGDGPPIFLLSLKAGGTGLNLT-AANHVVHLDRWWNPAVENQATDR-----AFRIGQRR 894 Query: 164 AVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 V V I T++E + + + K + DL++ Sbjct: 895 TVQVRKFICTGTLEEKIDEMIEEKKALADLVV 926 >gi|256272233|gb|EEU07224.1| Rad54p [Saccharomyces cerevisiae JAY291] gi|259146347|emb|CAY79604.1| Rad54p [Saccharomyces cerevisiae EC1118] Length = 898 Score = 110 bits (275), Expect = 1e-22, Method: Composition-based stats. Identities = 34/167 (20%), Positives = 69/167 (41%), Gaps = 21/167 (12%) Query: 46 KHWKEVHDEKIKALEVI---IEKANAAPIIVAYHFNSDLARLQK----------AFPQGR 92 + + + K LE I+ + I++ ++ L ++K Sbjct: 647 RDVQTKYSAKFSILERFLHKIKTESDDKIVLISNYTQTLDLIEKMCRYKHYSAVRLDGTM 706 Query: 93 TLDKDPCTIQEWN--EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 +++K + +N EG+ + + G G+NL G N L+ W+ QQ + R Sbjct: 707 SINKRQKLVDRFNDPEGQEFIFLLSSKAGGCGINL-IGANRLILMDPDWNPAADQQALAR 765 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + + G K+ F+Y I+ TI+E + QR K ++ +++A Sbjct: 766 VW-----RDGQKKDCFIYRFISTGTIEEKIFQRQSMKMSLSSCVVDA 807 >gi|113475235|ref|YP_721296.1| hypothetical protein Tery_1543 [Trichodesmium erythraeum IMS101] gi|110166283|gb|ABG50823.1| Protein splicing site [Trichodesmium erythraeum IMS101] Length = 1531 Score = 110 bits (275), Expect = 1e-22, Method: Composition-based stats. Identities = 40/221 (18%), Positives = 74/221 (33%), Gaps = 29/221 (13%) Query: 3 QYHKFQRELYCDLQ--GENIEAFNSASKTVKCLQLANGAVYYDEEK------HWKEVHDE 54 Y ++ G + +K QL N V +K + + Sbjct: 1292 LYQNIVENSLAEIDTVGGIQRKGKILALLIKLKQLCNHPVLLQIKKGSRKKVEITDKNSG 1351 Query: 55 KIK----ALEVIIEKANAAPIIVAY---------HFNSDLARLQKAFPQGRTLDKDPCTI 101 K++ LE II + A I + + L R K I Sbjct: 1352 KLQRLGAMLEEIISEEERAIIFTQFAEWGKVLQPYLQKSLGREVSFLYGSTQRSKREEMI 1411 Query: 102 QEWNEGKI--PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQA 159 ++ P++ + G GLNL N + F WW+ Q +R+ + Sbjct: 1412 DQFQLDPQGPPVMILSLKAGGTGLNLTR-ANHVFHFDRWWNPAVENQATDRVF-----RI 1465 Query: 160 GFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKK 200 G R V V+ + T++E + + +K + + ++ A +K Sbjct: 1466 GQTRNVQVHKFVCTGTLEEKIHDLIESKKELAEQVVGAGEK 1506 >gi|320581998|gb|EFW96217.1| DNA-dependent ATPase [Pichia angusta DL-1] Length = 828 Score = 110 bits (275), Expect = 1e-22, Method: Composition-based stats. Identities = 37/168 (22%), Positives = 66/168 (39%), Gaps = 21/168 (12%) Query: 45 EKHWKEVHDEKIKALEVI---IEKANAAPIIVAYHFNSDLARLQK-----AFPQGRT--- 93 K + + K LE I K I++ +F L ++K F R Sbjct: 577 NKDVQTWYSGKFAMLERFLFKIRKETDDKIVLISNFTQTLDLIEKLCRHHRFGTVRLDGS 636 Query: 94 --LDKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIE 149 ++K + +N+ + + G G+NL G N L+ W+ QQ + Sbjct: 637 LGINKRQKLVDRFNDPNADEFVFLLSSKAGGCGINL-IGANRLILLDPDWNPASDQQALA 695 Query: 150 RIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 R+ + G K+ F+Y IA TI+E + QR K + ++++ Sbjct: 696 RVW-----RDGQKKNCFIYRFIATGTIEEKIFQRQSAKMELSTCVVDS 738 >gi|225678310|gb|EEH16594.1| helicase SWR1 [Paracoccidioides brasiliensis Pb03] Length = 1611 Score = 110 bits (275), Expect = 1e-22, Method: Composition-based stats. Identities = 27/148 (18%), Positives = 58/148 (39%), Gaps = 11/148 (7%) Query: 50 EVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEG 107 K+ L+ ++ + +++ + R P D+ + Sbjct: 1325 VTDSGKLAKLDELLRELKNGGHRVLLYFQ-MDPHDRSDGGIPHLE--DRRDTVLDFQQRP 1381 Query: 108 KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFV 167 +I + + G G+NL + ++F+ W+ Q ++R + G R V V Sbjct: 1382 EIFVFLLSTRAGGLGINLT-AADTVIFYDSDWNPTIDSQAMDR-----AHRLGQTRQVTV 1435 Query: 168 YYLIAQNTIDELVLQRLRTKSTIQDLLL 195 Y LI + TI+E + +R K +Q +++ Sbjct: 1436 YRLITRGTIEERIRKRALQKEEVQRVVI 1463 >gi|320589784|gb|EFX02240.1| snf2 family helicase ATPase [Grosmannia clavigera kw1407] Length = 1885 Score = 110 bits (274), Expect = 1e-22, Method: Composition-based stats. Identities = 29/169 (17%), Positives = 67/169 (39%), Gaps = 19/169 (11%) Query: 50 EVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQKAF---------PQGRTLDKDP 98 K+ L+ ++ K +++ + + +++ G T +D Sbjct: 1600 VTDSGKLAKLDDLLFKLKEGGHRVLLYFQMTRMIDLMEEYLTYRNYKYCRLDGSTKLEDR 1659 Query: 99 CT-IQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 + ++ +I + + G G+NL + +VF+ W+ Q ++R Sbjct: 1660 RDTVHDFQTRPEIFIFLLSTRAGGLGINLT-SADTVVFYDSDWNPTIDSQAMDR-----A 1713 Query: 157 RQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIHV 205 + G R V VY +I + TI+E + +R K +Q +++ ++ V Sbjct: 1714 HRLGQTRQVTVYRMITRGTIEERIRKRALQKEEVQRVVIQGGGAASMGV 1762 >gi|256080936|ref|XP_002576731.1| DNA repair and recombination protein rad54-related [Schistosoma mansoni] gi|242318369|emb|CAZ32968.2| DNA repair and recombination protein rad54-related [Schistosoma mansoni] Length = 832 Score = 110 bits (274), Expect = 1e-22, Method: Composition-based stats. Identities = 31/155 (20%), Positives = 66/155 (42%), Gaps = 18/155 (11%) Query: 54 EKIKALEVIIEKANAAPIIVAYHFNSDLARLQK----------AFPQGRTLDKDPCTIQE 103 + + L +I+ + +++ ++ L ++ T+ K +++ Sbjct: 586 QVLDCLLAVIKSTTSDKVVLISNYTQTLDLFERLCLQRGYNFVRLDGTMTIKKRAKVVEQ 645 Query: 104 WNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGF 161 +N+ + + + G GLNL G N LV F W+ Q + R+ + G Sbjct: 646 FNDPTSRDFVFMLSSKAGGCGLNL-IGANRLVMFDPDWNPANDDQAMARVW-----RDGQ 699 Query: 162 KRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 K+ ++Y LI+ TI+E +LQR K + +++ Sbjct: 700 KKQCYIYRLISTGTIEEKMLQRQAHKKALSSCVVD 734 >gi|237737828|ref|ZP_04568309.1| SWF/SNF family helicase [Fusobacterium mortiferum ATCC 9817] gi|229419708|gb|EEO34755.1| SWF/SNF family helicase [Fusobacterium mortiferum ATCC 9817] Length = 913 Score = 110 bits (274), Expect = 2e-22, Method: Composition-based stats. Identities = 45/214 (21%), Positives = 83/214 (38%), Gaps = 32/214 (14%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKT--------VKCLQLANGAVYYDEEKHWKEVHD 53 K Y + +R Y ++ I+ N KT + Q+ + E V Sbjct: 693 KLYEE-RRNYYYNMVHSQIK-ENGLGKTQFFILQALNELRQITSC-----PESKSVGVTS 745 Query: 54 EKIKALEV-IIEK-ANAAPIIVAYHFNSDLARLQKAFPQ---------GRTLDKDPCTIQ 102 K + L I++ N ++V ++ + + + + G T D+ + Sbjct: 746 SKREVLINNILDAVENGHKVLVFTNYINSIKNICDDLEKYGIKYLSMSGATKDRQLLVDK 805 Query: 103 EWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFK 162 + K + + G GLNL + + + WW+ Q I+R + G Sbjct: 806 FQKDNKYKVFVMTLKTGGVGLNLT-AADTIFIYDPWWNKTVENQAIDR-----AYRLGQD 859 Query: 163 RAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 R VF Y LI ++TI+E +LQ +K + D L++ Sbjct: 860 RTVFSYKLILKDTIEEKILQLQESKIKLLDSLIS 893 >gi|157877576|ref|XP_001687105.1| helicase [Leishmania major strain Friedlin] gi|68130180|emb|CAJ09491.1| putative helicase [Leishmania major strain Friedlin] Length = 1285 Score = 110 bits (274), Expect = 2e-22, Method: Composition-based stats. Identities = 34/162 (20%), Positives = 73/162 (45%), Gaps = 19/162 (11%) Query: 55 KIKALEVIIEKA--NAAPIIVAYHFNSDLARLQKAF---------PQGRTLDK-DPCTIQ 102 K++ LE ++K + +++ F L L++ G T + + Sbjct: 870 KLQFLETALKKMRDDGHRMLIFTQFVHMLNILERFLALIGVVYTRLDGSTKAELRQQYVD 929 Query: 103 EWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGF 161 +N + +I + S G GLNL G + ++F+ W+ Q +R + G Sbjct: 930 RFNADPRITCMILSTRSGGIGLNLT-GADTVIFYDSDWNPTMDLQAQDRC-----HRIGQ 983 Query: 162 KRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETI 203 R V +Y LI+++T++E +L++ R + + ++++ + TI Sbjct: 984 TRPVTIYRLISEHTVEESILEKARERKKLNNVVIRGGQFHTI 1025 >gi|262066952|ref|ZP_06026564.1| SWF/SNF family helicase [Fusobacterium periodonticum ATCC 33693] gi|291379300|gb|EFE86818.1| SWF/SNF family helicase [Fusobacterium periodonticum ATCC 33693] Length = 896 Score = 110 bits (274), Expect = 2e-22, Method: Composition-based stats. Identities = 35/169 (20%), Positives = 72/169 (42%), Gaps = 16/169 (9%) Query: 38 GAVYYDEEKHWKEVHDEKIKALEVIIEK-ANAAPIIVAYHFNSDLARLQKAFPQ------ 90 V E + K + +K +E +IE N +++ ++ S + + + + Sbjct: 714 HIVSSPELDNNKIISSKKEVLIENVIEAIENNHKVLIFVNYLSSIESICNSLKENKIKFL 773 Query: 91 ---GRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQM 147 G+T D+ + ++ + + + G GLNL + + + WW+ Q Sbjct: 774 KMTGQTKDRQSLVDKFQSDDRYKVFVMTLKTGGVGLNL-VSADTIFIYDPWWNKTVENQA 832 Query: 148 IERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 I+R + G + VF Y +I +NTI+E +L+ K + D L++ Sbjct: 833 IDR-----AYRLGQDKTVFAYKMIMRNTIEEKILKLQEIKDKLLDDLIS 876 >gi|312221998|emb|CBY01938.1| hypothetical protein [Leptosphaeria maculans] Length = 1469 Score = 110 bits (274), Expect = 2e-22, Method: Composition-based stats. Identities = 39/173 (22%), Positives = 67/173 (38%), Gaps = 18/173 (10%) Query: 44 EEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLA---RLQKAFPQGRTL------ 94 E K W + + I I++ ++ L L ++ G Sbjct: 555 EVKVWYSGKMAVLDRMLARIRAETNDKIVLISNYTQTLDLFAALCRSRGYGALRLDGTMN 614 Query: 95 -DKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERI 151 K + ++N+ + P + + G GLNL G N LV F W+ QQ + R+ Sbjct: 615 VSKRQKLVDKFNDPEGPEFVFLLSSKAGGCGLNL-IGANRLVLFDPDWNPAADQQALARV 673 Query: 152 GVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIH 204 + G K+ FVY I TI+E V QR K ++ ++++ + H Sbjct: 674 W-----RDGQKKDCFVYRFITTGTIEEKVFQRQSHKQSLSSCVVDSAEDVERH 721 >gi|284040459|ref|YP_003390389.1| SNF2-related protein [Spirosoma linguale DSM 74] gi|283819752|gb|ADB41590.1| SNF2-related protein [Spirosoma linguale DSM 74] Length = 1185 Score = 110 bits (274), Expect = 2e-22, Method: Composition-based stats. Identities = 38/207 (18%), Positives = 75/207 (36%), Gaps = 22/207 (10%) Query: 3 QYHKFQRELYCDLQGENIEAFNSASK--TVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 Y +E ++ ++ A Q+ N Y ++ + K L Sbjct: 961 LYQSVVQESLRAIEEKDGIARRGLVLKLMTALKQIGNHPHQYLKKGNAAPSLSGKATLLL 1020 Query: 61 VIIEK--ANAAPIIVAYHFNSDLARLQKAFPQ-----------GRTLDKDPCTIQEWNEG 107 ++E AN +++ + L + Q G + + ++++ Sbjct: 1021 SLLETIYANHEKVLIFTQYKEMGELLTQFIQQSFGTQPLFLHGGTSRPERDRMVEQFQRN 1080 Query: 108 KIP-LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVF 166 + + G GLNL N ++ F LWW+ Q +R + G + V Sbjct: 1081 RSDHTFILSLKAGGTGLNLTQ-ANHVIHFDLWWNPAVESQATDR-----AFRIGQTKNVM 1134 Query: 167 VYYLIAQNTIDELVLQRLRTKSTIQDL 193 VY L+ Q T++E + +R+K + DL Sbjct: 1135 VYRLMNQGTLEEKIDAMIRSKRELADL 1161 >gi|319942577|ref|ZP_08016886.1| hypothetical protein HMPREF9464_02105 [Sutterella wadsworthensis 3_1_45B] gi|319803873|gb|EFW00795.1| hypothetical protein HMPREF9464_02105 [Sutterella wadsworthensis 3_1_45B] Length = 1352 Score = 110 bits (274), Expect = 2e-22, Method: Composition-based stats. Identities = 35/187 (18%), Positives = 64/187 (34%), Gaps = 23/187 (12%) Query: 26 ASKTVKCLQLANGAVYYDEEKHWKEVHDE-KIKALEVIIE--KANAAPIIVAYHFNSDLA 82 Q+ N + K D K AL I+ + +++ + Sbjct: 1154 LKLITSLKQICNSPSQF--LKTPSLTPDSGKGDALLEILSQCADSDRKVLIFTQYREMGE 1211 Query: 83 RLQKAFPQ-----------GRTLDKDPCTIQEWNEGKI-PLLFAHPASCGHGLNLQYGGN 130 RLQ Q G + ++ + + E + + G GLNL + Sbjct: 1212 RLQDWIAQALGERPDFLHGGVSAEERMKMVDRFQEDRTARSFILSLKAGGTGLNLT-AAS 1270 Query: 131 ILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 ++ + LWW+ Q +R + G +R V VY I + +E + L K + Sbjct: 1271 AVIHYDLWWNPAVEAQATDR-----AFRIGQRRDVLVYRFITAGSFEERINDMLMQKRDL 1325 Query: 191 QDLLLNA 197 D+ + A Sbjct: 1326 ADMTVAA 1332 >gi|195398201|ref|XP_002057711.1| GJ18280 [Drosophila virilis] gi|292630877|sp|B4M9A8|RAD54_DROVI RecName: Full=DNA repair and recombination protein RAD54-like; AltName: Full=Protein okra gi|194141365|gb|EDW57784.1| GJ18280 [Drosophila virilis] Length = 786 Score = 110 bits (274), Expect = 2e-22, Method: Composition-based stats. Identities = 29/146 (19%), Positives = 61/146 (41%), Gaps = 18/146 (12%) Query: 63 IEKANAAPIIVAYHFNSDLARLQKAFPQGR----------TLDKDPCTIQEWNEG--KIP 110 I + +++ ++ L ++ + + T+ K + +N+ Sbjct: 505 IRANSDDKVVLISNYTQTLDLFEQLARKRKYSYVRLDGTMTIKKRSKVVDRFNDPATDCF 564 Query: 111 LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYL 170 L + G GLNL G N L F W+ +Q + R+ + G K+ ++Y L Sbjct: 565 LFMLSSKAGGCGLNL-IGANRLFMFDPDWNPANDEQAMARVW-----RDGQKKPCYIYRL 618 Query: 171 IAQNTIDELVLQRLRTKSTIQDLLLN 196 +A +I+E +LQR K ++ +++ Sbjct: 619 VASGSIEEKILQRQTHKKSLSSSIID 644 >gi|156052200|ref|XP_001592061.1| hypothetical protein SS1G_07509 [Sclerotinia sclerotiorum 1980] gi|206557750|sp|A7EQA8|INO80_SCLS1 RecName: Full=Putative DNA helicase INO80 gi|154705285|gb|EDO05024.1| hypothetical protein SS1G_07509 [Sclerotinia sclerotiorum 1980 UF-70] Length = 1707 Score = 110 bits (274), Expect = 2e-22, Method: Composition-based stats. Identities = 27/161 (16%), Positives = 64/161 (39%), Gaps = 19/161 (11%) Query: 50 EVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQKAF---------PQGRTLDKDP 98 K+ L+ ++ K +++ + + +++ G T +D Sbjct: 1418 VTDSGKLAKLDSLLTKLKEGGHRVLLYFQMTRMIDLMEEYLTYRNYKYLRLDGSTKLEDR 1477 Query: 99 CT-IQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 + ++ +I + + G G+NL + ++F+ W+ Q ++R Sbjct: 1478 RDTVHDFQTRPEIFIFLLSTRAGGLGINLT-SADTVIFYDSDWNPTIDSQAMDR-----A 1531 Query: 157 RQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + G R V VY +I + TI+E + +R K +Q +++ Sbjct: 1532 HRLGQTRQVTVYRMITRGTIEERIRKRALQKEEVQKVVMTG 1572 >gi|328861152|gb|EGG10256.1| hypothetical protein MELLADRAFT_94587 [Melampsora larici-populina 98AG31] Length = 984 Score = 110 bits (274), Expect = 2e-22, Method: Composition-based stats. Identities = 43/225 (19%), Positives = 89/225 (39%), Gaps = 34/225 (15%) Query: 1 MKQYHKFQRELYCDLQGENIEAFNSASKTVKCL-QLANGA----VYYDEEKHWKEVHDEK 55 +K+ + +++ ++ E + NS ++ + L QL + + E EV + Sbjct: 424 VKEVKELSKQISYAIESETKDTSNSYTRLMNLLIQLRKVCDHPYLMPNSEPEPFEVAEHV 483 Query: 56 IKA------LEVIIEKA--NAAPIIVAYHFNSDLARLQK----------AFPQGRTLDKD 97 ++A L+ ++ I++ F L L+ G + + Sbjct: 484 VEASNKLILLDKLLTSLIPQGKRILIFSGFTRMLDILEDFLNLRSIGFLRLDGGTSRPRR 543 Query: 98 PCTIQEWNE---GKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIG 152 I+ + G++P + ++ G G+NL + +V + W+ + Q I R Sbjct: 544 SLNIRLFQNSFQGQLPKPVFLISTSAGGLGINLT-AADTVVLYDSSWNPQVDIQAIAR-- 600 Query: 153 VTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + G R V VY LI +++E +L RLR K + ++ A Sbjct: 601 ---AHRIGQTRPVTVYRLICAASVEEQMLSRLRKKLYLSLKIMEA 642 >gi|325089155|gb|EGC42465.1| DNA repair and recombination protein RAD54 [Ajellomyces capsulatus H88] Length = 830 Score = 110 bits (274), Expect = 2e-22, Method: Composition-based stats. Identities = 38/159 (23%), Positives = 68/159 (42%), Gaps = 19/159 (11%) Query: 58 ALEVIIEKANAAPIIVAYHFNSDL---ARLQKAFPQG-----RTLD--KDPCTIQEWN-- 105 L I + N +++ ++ L RL + G T++ K + ++N Sbjct: 591 MLARIRQDTNDKIVLI-SNYTQTLDLFERLCRTRQYGCLRLDGTMNVTKRQKLVDKFNDP 649 Query: 106 EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 G+ + + G G+NL G N LV F W+ QQ + R+ + G K+ Sbjct: 650 NGEEFVFLLSSKAGGCGINL-VGANRLVLFDPDWNPAADQQALARVW-----RDGQKKDC 703 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIH 204 FVY IA TI+E + QR K ++ ++++ + H Sbjct: 704 FVYRFIATGTIEEKIFQRQSHKQSLSSCVVDSAEDVERH 742 >gi|46110288|ref|XP_382202.1| hypothetical protein FG02026.1 [Gibberella zeae PH-1] gi|84029313|sp|Q4IL82|INO80_GIBZE RecName: Full=Putative DNA helicase INO80 Length = 1904 Score = 110 bits (274), Expect = 2e-22, Method: Composition-based stats. Identities = 27/161 (16%), Positives = 65/161 (40%), Gaps = 19/161 (11%) Query: 50 EVHDEKIKALEVII--EKANAAPIIVAYHFNSDLARLQKAF---------PQGRTLDKDP 98 K+ L+ ++ K+ +++ + + +++ G T +D Sbjct: 1622 VTDSGKLAKLDDLLFKLKSEGHRVLLYFQMTRMIDMMEEYLTYRNYKYCRLDGSTKLEDR 1681 Query: 99 CT-IQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 + ++ +I + + G G+NL + ++F+ W+ Q ++R Sbjct: 1682 RDTVHDFQTRPEIFIFLLSTRAGGLGINLTT-ADTVIFYDSDWNPTIDSQAMDR-----A 1735 Query: 157 RQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + G + V VY LI + TI+E + +R K +Q +++ Sbjct: 1736 HRLGQTKQVTVYRLITRGTIEERIRKRAMQKEEVQRVVIQG 1776 >gi|317143637|ref|XP_001819595.2| DNA repair protein rhp54 [Aspergillus oryzae RIB40] Length = 827 Score = 110 bits (274), Expect = 2e-22, Method: Composition-based stats. Identities = 36/173 (20%), Positives = 68/173 (39%), Gaps = 18/173 (10%) Query: 44 EEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQK----------AFPQGRT 93 + K W + + I + I++ ++ L +K Sbjct: 573 DIKSWYSGKMMVLDRMLARIRQDTNDKIVLISNYTQTLDLFEKLCRSRGYGSLRLDGTMN 632 Query: 94 LDKDPCTIQEWNE--GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERI 151 ++K + ++N G+ + + G GLNL G N LV F W+ QQ + R+ Sbjct: 633 VNKRQKLVDKFNNPDGEEFVFLLSSKAGGCGLNL-IGANRLVLFDPDWNPAADQQALARV 691 Query: 152 GVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIH 204 + G K+ FVY IA +I+E + QR K ++ ++++ + H Sbjct: 692 W-----RDGQKKDCFVYRFIATGSIEEKIFQRQSHKQSLSSCVVDSAEDVERH 739 >gi|83767454|dbj|BAE57593.1| unnamed protein product [Aspergillus oryzae] Length = 815 Score = 110 bits (274), Expect = 2e-22, Method: Composition-based stats. Identities = 36/173 (20%), Positives = 68/173 (39%), Gaps = 18/173 (10%) Query: 44 EEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQK----------AFPQGRT 93 + K W + + I + I++ ++ L +K Sbjct: 561 DIKSWYSGKMMVLDRMLARIRQDTNDKIVLISNYTQTLDLFEKLCRSRGYGSLRLDGTMN 620 Query: 94 LDKDPCTIQEWNE--GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERI 151 ++K + ++N G+ + + G GLNL G N LV F W+ QQ + R+ Sbjct: 621 VNKRQKLVDKFNNPDGEEFVFLLSSKAGGCGLNL-IGANRLVLFDPDWNPAADQQALARV 679 Query: 152 GVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIH 204 + G K+ FVY IA +I+E + QR K ++ ++++ + H Sbjct: 680 W-----RDGQKKDCFVYRFIATGSIEEKIFQRQSHKQSLSSCVVDSAEDVERH 727 >gi|158312364|ref|YP_001504872.1| non-specific serine/threonine protein kinase [Frankia sp. EAN1pec] gi|158107769|gb|ABW09966.1| Non-specific serine/threonine protein kinase [Frankia sp. EAN1pec] Length = 617 Score = 110 bits (274), Expect = 2e-22, Method: Composition-based stats. Identities = 35/212 (16%), Positives = 74/212 (34%), Gaps = 27/212 (12%) Query: 2 KQYHKFQRELYCDLQGENIEAFN-SASKTVKCLQLANGAVYYDEEKHWKEVHDEKIK--- 57 + Y + + + G IE + Q+ N Y E K Sbjct: 386 RLYREAVDRAFTEGLGAGIERSGRVLALLTALKQICNHPAQYLREDTATPGRSGKFDRAT 445 Query: 58 -ALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQ------------GRTLDKDPCTIQEW 104 L ++E+ + ++V + + L + G ++ + + + Sbjct: 446 EMLSEVVEQDDR--VLVFTQYRAMGKLLSRYLGTALGVGLVPFLHGGLSMQRRDELVHAF 503 Query: 105 NEGKI--PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFK 162 E P+L + G GLNL +++ + WW+ +Q +R + G Sbjct: 504 QEDDDAPPVLLLSLRAAGFGLNLTRASHVM-HYDRWWNPAVEEQATDR-----AHRIGQS 557 Query: 163 RAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 R + VY L+ TI++ + Q K + +++ Sbjct: 558 RTLNVYTLVTGGTIEDHIAQMHENKRGVAEIV 589 >gi|327349292|gb|EGE78149.1| DsDNA-dependent ATPase Rad54 [Ajellomyces dermatitidis ATCC 18188] Length = 849 Score = 110 bits (274), Expect = 2e-22, Method: Composition-based stats. Identities = 38/159 (23%), Positives = 68/159 (42%), Gaps = 19/159 (11%) Query: 58 ALEVIIEKANAAPIIVAYHFNSDL---ARLQKAFPQG-----RTLD--KDPCTIQEWN-- 105 L I + N +++ ++ L RL + G T++ K + ++N Sbjct: 610 MLARIRQDTNDKIVLI-SNYTQTLDLFERLCRTRQYGCLRLDGTMNVTKRQKLVDKFNDP 668 Query: 106 EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 G+ + + G G+NL G N LV F W+ QQ + R+ + G K+ Sbjct: 669 NGEEFVFLLSSKAGGCGINL-IGANRLVLFDPDWNPAADQQALARVW-----RDGQKKDC 722 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIH 204 FVY IA TI+E + QR K ++ ++++ + H Sbjct: 723 FVYRFIATGTIEEKIFQRQSHKQSLSSCVVDSAEDVERH 761 >gi|239608107|gb|EEQ85094.1| DNA repair and recombination protein RAD54 [Ajellomyces dermatitidis ER-3] Length = 795 Score = 110 bits (274), Expect = 2e-22, Method: Composition-based stats. Identities = 38/159 (23%), Positives = 68/159 (42%), Gaps = 19/159 (11%) Query: 58 ALEVIIEKANAAPIIVAYHFNSDL---ARLQKAFPQG-----RTLD--KDPCTIQEWN-- 105 L I + N +++ ++ L RL + G T++ K + ++N Sbjct: 556 MLARIRQDTNDKIVLI-SNYTQTLDLFERLCRTRQYGCLRLDGTMNVTKRQKLVDKFNDP 614 Query: 106 EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 G+ + + G G+NL G N LV F W+ QQ + R+ + G K+ Sbjct: 615 NGEEFVFLLSSKAGGCGINL-IGANRLVLFDPDWNPAADQQALARVW-----RDGQKKDC 668 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIH 204 FVY IA TI+E + QR K ++ ++++ + H Sbjct: 669 FVYRFIATGTIEEKIFQRQSHKQSLSSCVVDSAEDVERH 707 >gi|261203723|ref|XP_002629075.1| dsDNA-dependent ATPase Rad54 [Ajellomyces dermatitidis SLH14081] gi|239586860|gb|EEQ69503.1| dsDNA-dependent ATPase Rad54 [Ajellomyces dermatitidis SLH14081] Length = 828 Score = 110 bits (274), Expect = 2e-22, Method: Composition-based stats. Identities = 38/159 (23%), Positives = 68/159 (42%), Gaps = 19/159 (11%) Query: 58 ALEVIIEKANAAPIIVAYHFNSDL---ARLQKAFPQG-----RTLD--KDPCTIQEWN-- 105 L I + N +++ ++ L RL + G T++ K + ++N Sbjct: 589 MLARIRQDTNDKIVLI-SNYTQTLDLFERLCRTRQYGCLRLDGTMNVTKRQKLVDKFNDP 647 Query: 106 EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 G+ + + G G+NL G N LV F W+ QQ + R+ + G K+ Sbjct: 648 NGEEFVFLLSSKAGGCGINL-IGANRLVLFDPDWNPAADQQALARVW-----RDGQKKDC 701 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIH 204 FVY IA TI+E + QR K ++ ++++ + H Sbjct: 702 FVYRFIATGTIEEKIFQRQSHKQSLSSCVVDSAEDVERH 740 >gi|225560868|gb|EEH09149.1| DNA repair and recombination protein RAD54 [Ajellomyces capsulatus G186AR] Length = 1511 Score = 110 bits (274), Expect = 2e-22, Method: Composition-based stats. Identities = 38/159 (23%), Positives = 68/159 (42%), Gaps = 19/159 (11%) Query: 58 ALEVIIEKANAAPIIVAYHFNSDL---ARLQKAFPQG-----RTLD--KDPCTIQEWN-- 105 L I + N +++ ++ L RL + G T++ K + ++N Sbjct: 499 MLARIRQDTNDKIVLI-SNYTQTLDLFERLCRTRQYGCLRLDGTMNVTKRQKLVDKFNDP 557 Query: 106 EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 G+ + + G G+NL G N LV F W+ QQ + R+ + G K+ Sbjct: 558 NGEEFVFLLSSKAGGCGINL-IGANRLVLFDPDWNPAADQQALARVW-----RDGQKKDC 611 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIH 204 FVY IA TI+E + QR K ++ ++++ + H Sbjct: 612 FVYRFIATGTIEEKIFQRQSHKQSLSSCVVDSAEDVERH 650 >gi|150865881|ref|XP_001385272.2| helicase [Scheffersomyces stipitis CBS 6054] gi|149387137|gb|ABN67243.2| helicase [Scheffersomyces stipitis CBS 6054] Length = 809 Score = 110 bits (274), Expect = 2e-22, Method: Composition-based stats. Identities = 37/165 (22%), Positives = 62/165 (37%), Gaps = 20/165 (12%) Query: 45 EKHWKEVHDEKIKALEVI---IEKANAAPIIVAYHFNSDLARLQKAFPQ----------G 91 K+ KI L + I N ++V ++ L L+ + Sbjct: 507 NKNTLTTSSGKINILIPLLLEITSFNEKIVLV-SNYTKTLDLLEAVLKKLDLSFLRLDGS 565 Query: 92 RTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERI 151 + + ++N+ I + S G GLNL G + L+ F W+ Q + RI Sbjct: 566 TAKNLRNKLVNQFNKSNINVFLLSSKSGGMGLNL-VGASRLILFDNDWNPSVDLQSMSRI 624 Query: 152 GVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + G R F+Y ++ TIDE + QR KS + L+ Sbjct: 625 -----HRDGQTRPCFIYRILTTGTIDEKIFQRQLMKSKLSSKFLD 664 >gi|255564822|ref|XP_002523405.1| Helicase, putative [Ricinus communis] gi|223537355|gb|EEF38984.1| Helicase, putative [Ricinus communis] Length = 2029 Score = 110 bits (274), Expect = 2e-22, Method: Composition-based stats. Identities = 37/167 (22%), Positives = 73/167 (43%), Gaps = 19/167 (11%) Query: 44 EEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQ---------KAFPQGR 92 ++ + K++ L V++ + + ++ L L+ G Sbjct: 1024 PDRRLIQFDCGKLQKLAVLLRRLKSEGHRALIFTQMTKMLDILEAFINLYGYTYMRLDGS 1083 Query: 93 TLDKDPCTI-QEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 T + T+ Q +N KI L S G G+NL +G + ++F+ W+ QQ +R Sbjct: 1084 TQPEQRQTLMQRFNTNPKIFLFILSTRSGGVGINL-FGADTVIFYDSDWNPAMDQQAQDR 1142 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + G R V +Y LI+++TI+E +L++ K + DL++ + Sbjct: 1143 C-----HRIGQTREVHIYRLISESTIEENILKKANQKRALDDLVIQS 1184 >gi|323348699|gb|EGA82941.1| Ino80p [Saccharomyces cerevisiae Lalvin QA23] Length = 1374 Score = 110 bits (274), Expect = 2e-22, Method: Composition-based stats. Identities = 26/158 (16%), Positives = 64/158 (40%), Gaps = 19/158 (12%) Query: 53 DEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQK----------AFPQGRTLDKDPCT 100 K++ L+ ++ K + +++ + + +++ L+ Sbjct: 1183 SAKLRKLDELLVKLKSEGHRVLIYFQMTKMMDLMEEYLTYRQYNHIRLDGSSKLEDRRDL 1242 Query: 101 IQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQA 159 + +W +I + + G G+NL + ++F+ W+ Q ++R + Sbjct: 1243 VHDWQTNPEIFVFLLSTRAGGLGINLT-AADTVIFYDSDWNPTIDSQAMDR-----AHRL 1296 Query: 160 GFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 G R V VY L+ + TI+E + R + K +Q +++ Sbjct: 1297 GQTRQVTVYRLLVRGTIEERMRDRAKQKEQVQQVVMEG 1334 >gi|253798840|ref|YP_003031841.1| helicase helZ [Mycobacterium tuberculosis KZN 1435] gi|297634684|ref|ZP_06952464.1| helicase helZ [Mycobacterium tuberculosis KZN 4207] gi|297731672|ref|ZP_06960790.1| helicase helZ [Mycobacterium tuberculosis KZN R506] gi|313659007|ref|ZP_07815887.1| helicase helZ [Mycobacterium tuberculosis KZN V2475] gi|253320343|gb|ACT24946.1| helicase helZ [Mycobacterium tuberculosis KZN 1435] gi|328458599|gb|AEB04022.1| helicase helZ [Mycobacterium tuberculosis KZN 4207] Length = 849 Score = 109 bits (273), Expect = 2e-22, Method: Composition-based stats. Identities = 36/212 (16%), Positives = 67/212 (31%), Gaps = 25/212 (11%) Query: 3 QYHKFQRELYCDLQGEN--IEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 Y ++ ++ N + K Q+ N ++ K+ LE Sbjct: 616 LYQAVVADMMEKIENTEGIERRGNVLAAMAKLKQVCNHPAQLLHDRSPVGRRSGKVIRLE 675 Query: 61 VIIEKAN--AAPIIVAYHFNSDLARLQKAFP--------------QGRTLDKDPCTIQEW 104 I+E+ ++ F L G + + + Sbjct: 676 EILEEILAEGDRVLCFTQFTEFAELLVPHLAARFGRAARDIAYLHGGTPRKRRDEMVARF 735 Query: 105 NEGK-IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKR 163 G P+ + G GLNL N +V WW+ Q +R + G +R Sbjct: 736 QSGDGPPIFLLSLKAGGTGLNLT-AANHVVHLDRWWNPAVENQATDR-----AFRIGQRR 789 Query: 164 AVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 V V I T++E + + + K + DL++ Sbjct: 790 TVQVRKFICTGTLEEKIDEMIEEKKALADLVV 821 >gi|159027170|emb|CAO86802.1| unnamed protein product [Microcystis aeruginosa PCC 7806] Length = 1020 Score = 109 bits (273), Expect = 2e-22, Method: Composition-based stats. Identities = 38/214 (17%), Positives = 77/214 (35%), Gaps = 24/214 (11%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSA--SKTVKCLQLANG-AVYYDEEKHWKEVHDEKIKA 58 + Y + ++ + + ++ Q+ N A + E K+ Sbjct: 782 QLYQQLVETTLQKIEETQGIQRHGLILTLLMQLKQICNHPAHFLKENSLETSQRSGKLLR 841 Query: 59 LEVIIEK--ANAAPIIVAYHF----NSDLARLQKAFPQ--------GRTLDKDPCTIQEW 104 LE ++E+ A ++ F LQK + +T D+ + Sbjct: 842 LEAMVEEVIAEGDRALIFTQFAEWGKLLQTHLQKKLAEEILFLSGSTKTKDRVEMIERFQ 901 Query: 105 NEGKIP-LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKR 163 N+ + P + + G GLNL N + WW+ Q +R + G KR Sbjct: 902 NDPQGPKIFILSLKAGGTGLNLTR-ANHVFHIDRWWNPAVENQATDR-----AFRIGQKR 955 Query: 164 AVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 V V+ I T++E + + + +K + + ++A Sbjct: 956 NVQVHKFICTGTLEERINEMIESKKQLAEQTVDA 989 >gi|238487360|ref|XP_002374918.1| dsDNA-dependent ATPase Rad54, putative [Aspergillus flavus NRRL3357] gi|220699797|gb|EED56136.1| dsDNA-dependent ATPase Rad54, putative [Aspergillus flavus NRRL3357] Length = 682 Score = 109 bits (273), Expect = 2e-22, Method: Composition-based stats. Identities = 36/173 (20%), Positives = 68/173 (39%), Gaps = 18/173 (10%) Query: 44 EEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQK----------AFPQGRT 93 + K W + + I + I++ ++ L +K Sbjct: 428 DIKSWYSGKMMVLDRMLARIRQDTNDKIVLISNYTQTLDLFEKLCRSRGYGSLRLDGTMN 487 Query: 94 LDKDPCTIQEWNE--GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERI 151 ++K + ++N G+ + + G GLNL G N LV F W+ QQ + R+ Sbjct: 488 VNKRQKLVDKFNNPDGEEFVFLLSSKAGGCGLNL-IGANRLVLFDPDWNPAADQQALARV 546 Query: 152 GVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIH 204 + G K+ FVY IA +I+E + QR K ++ ++++ + H Sbjct: 547 W-----RDGQKKDCFVYRFIATGSIEEKIFQRQSHKQSLSSCVVDSAEDVERH 594 >gi|255020423|ref|ZP_05292489.1| helicase, SNF2 family [Acidithiobacillus caldus ATCC 51756] gi|254970136|gb|EET27632.1| helicase, SNF2 family [Acidithiobacillus caldus ATCC 51756] Length = 1165 Score = 109 bits (273), Expect = 2e-22, Method: Composition-based stats. Identities = 44/214 (20%), Positives = 80/214 (37%), Gaps = 24/214 (11%) Query: 2 KQYHKFQRELYCDLQGENIE---AFNSASKTVKCLQLANG-AVYYDEEKHWKEVHDEKIK 57 Y RE ++GE+ + Q+ N A Y E+ K Sbjct: 938 ALYESVVRESLQVIRGESDTFHRKGLVLQMILALKQVCNHPAHYLKEQGDRGPSISGKAS 997 Query: 58 ALEVIIEK--ANAAPIIVAYHFNSDLARLQ-------KAFP----QGRTLDKDPCTIQEW 104 L ++E AN ++ F L+ P G T + + ++ Sbjct: 998 LLLDLLEPILANHEKCLIFTQFREMGELLRPWIREATGHLPPFLHGGVTRKQRDVMVDKF 1057 Query: 105 N-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKR 163 + + +L + G GLNL + +V + LWW+ Q +R + G +R Sbjct: 1058 QQDPRERILILSLKAGGTGLNLT-AASHVVHYDLWWNPAVEAQATDR-----AYRIGQQR 1111 Query: 164 AVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 V V+ LI + T +E + + ++TK + +L + A Sbjct: 1112 NVQVHRLITRATFEERINELMKTKRDLANLTVGA 1145 >gi|322828989|gb|EFZ32571.1| helicase, putative [Trypanosoma cruzi] Length = 1268 Score = 109 bits (273), Expect = 2e-22, Method: Composition-based stats. Identities = 30/156 (19%), Positives = 67/156 (42%), Gaps = 19/156 (12%) Query: 55 KIKALEVIIEKA--NAAPIIVAYHFNSDLARLQK----------AFPQGRTLDKDPCTIQ 102 K++ L+ +++ +++ F L L++ ++ + Sbjct: 891 KLQFLQHALKQLRREGHRMLIFTQFVHMLNILERFLAIIGIPYLRIDGSTQAERRQAFVD 950 Query: 103 EWNEGK-IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGF 161 +NE I + S G GLNL G + ++F+ W+ Q +R + G Sbjct: 951 RFNEDDRITCMILSTRSGGIGLNLT-GADTVIFYDSDWNPTMDLQAQDRC-----HRIGQ 1004 Query: 162 KRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + V +Y LI+++T++E +LQR R + + ++++ Sbjct: 1005 TKPVTIYRLISEHTVEENILQRARERKKLNNVVIRG 1040 >gi|320538119|ref|ZP_08038015.1| protein, SNF2 family [Treponema phagedenis F0421] gi|320145032|gb|EFW36752.1| protein, SNF2 family [Treponema phagedenis F0421] Length = 1211 Score = 109 bits (273), Expect = 2e-22, Method: Composition-based stats. Identities = 34/212 (16%), Positives = 69/212 (32%), Gaps = 23/212 (10%) Query: 1 MKQYHKFQRELYCDLQGENIEAFNSA---SKTVKCLQLANGAVYYDEEKHWKEVHDEKIK 57 + Y R+ SA Q+ N YD+ K+ Sbjct: 985 VAIYESLIRQQLKTALNAKDSIQRSAFIVKLLTALKQVCNHPRTYDKISPPDINLSGKML 1044 Query: 58 ALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFP------------QGRTLDKDPCTIQE 103 +L +++++ ++ + L L++ Q + Sbjct: 1045 SLIILLKEILTAGEKTLIFSQYTETLFLLKEIIKAELDEDCLLLHGQMPARKRQQNVTAF 1104 Query: 104 WNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKR 163 E + + G GLNL + ++ F LW++ Q +R + G ++ Sbjct: 1105 QTEPDKRIFLISLKAGGTGLNLT-AASRVIHFDLWYNPAVEDQATDR-----AFRIGQQK 1158 Query: 164 AVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 VFV+ I T +E + + ++ K + D L Sbjct: 1159 HVFVHRFICAGTFEEKIDEMIQRKRAVSDKTL 1190 >gi|195435389|ref|XP_002065674.1| GK15573 [Drosophila willistoni] gi|292630875|sp|B4MX21|RAD54_DROWI RecName: Full=DNA repair and recombination protein RAD54-like; AltName: Full=Protein okra gi|194161759|gb|EDW76660.1| GK15573 [Drosophila willistoni] Length = 784 Score = 109 bits (273), Expect = 2e-22, Method: Composition-based stats. Identities = 29/153 (18%), Positives = 63/153 (41%), Gaps = 18/153 (11%) Query: 56 IKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGR----------TLDKDPCTIQEWN 105 + + I + +++ ++ L ++ + + T+ K + +N Sbjct: 502 LDFMLATIRANSDDKVVLISNYTQTLDLFEQLARKRKYTFVRLDGTMTIKKRSKVVDRFN 561 Query: 106 EG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKR 163 + L + G GLNL G N L F W+ +Q + R+ + G K+ Sbjct: 562 DPENDCFLFMLSSKAGGCGLNL-IGANRLFMFDPDWNPANDEQAMARVW-----RDGQKK 615 Query: 164 AVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 ++Y L+A +I+E +LQR K ++ +++ Sbjct: 616 PCYIYRLVASGSIEEKILQRQTHKKSLSSTIID 648 >gi|148697110|gb|EDL29057.1| SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, isoform CRA_c [Mus musculus] Length = 1087 Score = 109 bits (273), Expect = 2e-22, Method: Composition-based stats. Identities = 43/230 (18%), Positives = 91/230 (39%), Gaps = 40/230 (17%) Query: 1 MKQY---HKFQRELYCDLQGENIEAFNSASKTVK------CLQL---ANGAVYYD----- 43 +K Y K QRE Y + ++I+ NS+ K K +QL N +D Sbjct: 458 IKIYLGLSKMQREWYTKILMKDIDVLNSSGKMDKMRLLNILMQLRKCCNHPYLFDGAEPG 517 Query: 44 ---EEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQ---------KAFP 89 + K+ AL+ ++ + + +++ L L+ + Sbjct: 518 PPYTTDEHIVGNSGKMVALDKLLARIKEQGSRVLIFSQMTRLLDILEDYCMWRGYEYSRL 577 Query: 90 QGRTL-DKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 G+T ++ I +N + + G G+NL ++++ + W+ + Q Sbjct: 578 DGQTPHEEREEAIDAFNAPNSSKFIFMLSTRAGGLGINL-ASADVVILYDSDWNPQVDLQ 636 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 ++R + G K+ V V+ LI NT++E +++R K + +++ Sbjct: 637 AMDR-----AHRIGQKKPVRVFRLITDNTVEERIVERAEIKLRLDSIVIQ 681 >gi|195116621|ref|XP_002002852.1| GI10760 [Drosophila mojavensis] gi|292630864|sp|B4KHL5|RAD54_DROMO RecName: Full=DNA repair and recombination protein RAD54-like; AltName: Full=Protein okra gi|193913427|gb|EDW12294.1| GI10760 [Drosophila mojavensis] Length = 783 Score = 109 bits (272), Expect = 2e-22, Method: Composition-based stats. Identities = 29/146 (19%), Positives = 61/146 (41%), Gaps = 18/146 (12%) Query: 63 IEKANAAPIIVAYHFNSDLARLQKAFPQGR----------TLDKDPCTIQEWNEG--KIP 110 I + +++ ++ L ++ + + T+ K + +N+ Sbjct: 505 IRANSDDKVVLISNYTQTLDLFEQLARKRKYTYVRLDGTMTIKKRSKVVDRFNDPSTDCF 564 Query: 111 LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYL 170 L + G GLNL G N L F W+ +Q + R+ + G K+ ++Y L Sbjct: 565 LFMLSSKAGGCGLNL-IGANRLFMFDPDWNPANDEQAMARVW-----RDGQKKPCYIYRL 618 Query: 171 IAQNTIDELVLQRLRTKSTIQDLLLN 196 +A +I+E +LQR K ++ +++ Sbjct: 619 VASGSIEEKILQRQTHKKSLSSTIID 644 >gi|195031155|ref|XP_001988299.1| GH10642 [Drosophila grimshawi] gi|292630863|sp|B4JCS7|RAD54_DROGR RecName: Full=DNA repair and recombination protein RAD54-like; AltName: Full=Protein okra gi|193904299|gb|EDW03166.1| GH10642 [Drosophila grimshawi] Length = 786 Score = 109 bits (272), Expect = 2e-22, Method: Composition-based stats. Identities = 29/146 (19%), Positives = 61/146 (41%), Gaps = 18/146 (12%) Query: 63 IEKANAAPIIVAYHFNSDLARLQKAFPQGR----------TLDKDPCTIQEWNEG--KIP 110 I + +++ ++ L ++ + + T+ K + +N+ Sbjct: 505 IRANSDDKVVLISNYTQTLDLFEQLARKRKYSYVRLDGTMTIKKRSKVVDRFNDPSSDCF 564 Query: 111 LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYL 170 L + G GLNL G N L F W+ +Q + R+ + G K+ ++Y L Sbjct: 565 LFMLSSKAGGCGLNL-IGANRLFMFDPDWNPANDEQAMARVW-----RDGQKKPCYIYRL 618 Query: 171 IAQNTIDELVLQRLRTKSTIQDLLLN 196 +A +I+E +LQR K ++ +++ Sbjct: 619 VASGSIEEKILQRQTHKKSLSSTIID 644 >gi|237720473|ref|ZP_04550954.1| Snf2 family helicase [Bacteroides sp. 2_2_4] gi|229450224|gb|EEO56015.1| Snf2 family helicase [Bacteroides sp. 2_2_4] Length = 946 Score = 109 bits (272), Expect = 3e-22, Method: Composition-based stats. Identities = 31/178 (17%), Positives = 63/178 (35%), Gaps = 20/178 (11%) Query: 29 TVKCLQLANGA--VYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQK 86 ++ QL+ + D + + I+ + + ++ +++ F L L + Sbjct: 760 ILRLRQLSCHPQLILPDYTGTSGKTA-QIIETFDTL--QSEGHKVLIFSSFVRHLEVLAE 816 Query: 87 AF---------PQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSL 137 AF G T ++ ++ + + G GLNL + + Sbjct: 817 AFHERGWKYALLTGSTNNRPSEIAHFTDQKDVQAFLISLKAGGVGLNLTQADYVFI-IDP 875 Query: 138 WWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 WW+ Q I R + G + V Y I QN+I+E +L K + + + Sbjct: 876 WWNPAAESQAIAR-----AHRIGQDKQVIAYRFITQNSIEEKILHLQDEKRKLAETFV 928 >gi|260815483|ref|XP_002602502.1| hypothetical protein BRAFLDRAFT_281964 [Branchiostoma floridae] gi|229287813|gb|EEN58514.1| hypothetical protein BRAFLDRAFT_281964 [Branchiostoma floridae] Length = 700 Score = 109 bits (272), Expect = 3e-22, Method: Composition-based stats. Identities = 35/168 (20%), Positives = 67/168 (39%), Gaps = 21/168 (12%) Query: 44 EEKHWKEVHDEKIKALEVIIEKANAA---PIIVAYHFNSDLARLQK----------AFPQ 90 KH + K+ L+ I+ + +++ ++ L +K Sbjct: 442 SPKHIQPELSGKMLVLDYILAMTKSKTSDKVVLVSNYTQTLDLFEKLCRSRGYLYVRLDG 501 Query: 91 GRTLDKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMI 148 T+ K ++ +N P + + G GLNL G N LV F W+ +Q + Sbjct: 502 SMTIKKRAKVVERFNNPSSPEFIFMLSSKAGGCGLNL-IGANRLVMFDPDWNPANDEQAM 560 Query: 149 ERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 R+ + G K+ ++Y L+A TI+E + QR K + +++ Sbjct: 561 ARVW-----RDGQKKQCYIYRLLATGTIEEKIFQRQAHKKALSSCVVD 603 >gi|115389990|ref|XP_001212500.1| DNA repair and recombination protein RAD54 [Aspergillus terreus NIH2624] gi|114194896|gb|EAU36596.1| DNA repair and recombination protein RAD54 [Aspergillus terreus NIH2624] Length = 821 Score = 109 bits (272), Expect = 3e-22, Method: Composition-based stats. Identities = 36/173 (20%), Positives = 68/173 (39%), Gaps = 18/173 (10%) Query: 44 EEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQK----------AFPQGRT 93 + K W + + I + I++ ++ L +K Sbjct: 567 DIKSWYSGKMMVLDRMLARIRQDTNDKIVLISNYTQTLDLFEKLCRSRGYGSLRLDGTMN 626 Query: 94 LDKDPCTIQEWNE--GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERI 151 + K + ++N+ G+ + + G GLNL G N LV F W+ QQ + R+ Sbjct: 627 VKKRQKLVDKFNDPDGEEFVFLLSSKAGGCGLNL-IGANRLVLFDPDWNPAADQQALARV 685 Query: 152 GVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIH 204 + G K+ FVY IA +I+E + QR K ++ ++++ + H Sbjct: 686 W-----RDGQKKDCFVYRFIATGSIEEKIFQRQSHKQSLSSCVVDSAEDVERH 733 >gi|271968044|ref|YP_003342240.1| SNF2/helicase domain-containing protein [Streptosporangium roseum DSM 43021] gi|270511219|gb|ACZ89497.1| SNF2/helicase domain protein [Streptosporangium roseum DSM 43021] Length = 1040 Score = 109 bits (272), Expect = 3e-22, Method: Composition-based stats. Identities = 34/211 (16%), Positives = 70/211 (33%), Gaps = 22/211 (10%) Query: 3 QYHKFQRELYCDLQG--ENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 Y ++ + G N + + Q+ N + ++ K+ LE Sbjct: 811 LYKAVVNDMLDRIDGSRGIERRGNVLATMTRLKQICNHPAHLLKDGSRLAGRSGKLARLE 870 Query: 61 VIIEKAN--AAPIIVAYHFNSDLARLQKAFP-----------QGRTLDKDPCTIQEWNEG 107 + E+ +V + + LQ G ++ ++ + Sbjct: 871 ELAEEIVEEGDKALVFTQYTEFGSLLQPYLAAHLDRPVLWLHGGLPKNRREELVERFQRD 930 Query: 108 KIP-LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVF 166 P L + G GLNL N ++ WW+ Q +R + G R V Sbjct: 931 DEPMLFLLSLKAAGTGLNLT-AANHVIHVDRWWNPAVENQATDR-----AFRIGQTRNVQ 984 Query: 167 VYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 V I +T++E + + + K + + ++ A Sbjct: 985 VRKFICVDTLEERIDEMIERKKALAESVVGA 1015 >gi|321253974|ref|XP_003192917.1| DNA repair protein [Cryptococcus gattii WM276] gi|317459386|gb|ADV21130.1| DNA repair protein, putative [Cryptococcus gattii WM276] Length = 993 Score = 109 bits (272), Expect = 3e-22, Method: Composition-based stats. Identities = 35/155 (22%), Positives = 64/155 (41%), Gaps = 20/155 (12%) Query: 56 IKALEVIIEKANAAPIIVAYHFNSDLARLQK----------AFPQGRTLDKDPCTIQEWN 105 + + I ++ ++V ++ S L +Q + + +N Sbjct: 608 LDKMLHSIYQSTEEKVVVVSNWTSTLDLIQGLCKLKRYNYLRLDGSTPPKQRQELVDRFN 667 Query: 106 EGKIP----LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGF 161 + K + + G GLNL GG+ L+ F W+ Q + RI + G Sbjct: 668 KDKERQGSFVFLLSAKAGGVGLNL-IGGSRLILFDSDWNPSTDLQAMARI-----HRDGQ 721 Query: 162 KRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 KR V++Y L+ N IDE + QR TK+ + D +++ Sbjct: 722 KRPVYIYRLLTTNAIDEKIYQRQITKTGLSDQMMD 756 >gi|258517381|ref|YP_003193603.1| SNF2-related protein [Desulfotomaculum acetoxidans DSM 771] gi|257781086|gb|ACV64980.1| SNF2-related protein [Desulfotomaculum acetoxidans DSM 771] Length = 980 Score = 109 bits (272), Expect = 3e-22, Method: Composition-based stats. Identities = 35/220 (15%), Positives = 75/220 (34%), Gaps = 28/220 (12%) Query: 3 QYHKFQRELYCDLQGENIEAFNS--ASKTVKCLQLANGAVYYDEEKHWKEVHDE--KIKA 58 Y + ++ L+ A S +K QL + + +E+ + + K++ Sbjct: 744 LYENTLQNMFERLEEAAGMARRGVILSTLMKLKQLCDHPALFLKEEVPSNIRERSLKLER 803 Query: 59 LEVIIEKA--NAAPIIVAYHFNSDLARLQKAFPQ-----------GRTLDKDPCTIQEWN 105 L ++EK ++ F +Q+ + G + I + Sbjct: 804 LLEMVEKLRQEGDSCLIFTQFVGMGQMIQRLLQKELKEEVYFLYGGTPRARREEMITGFQ 863 Query: 106 EGKIP-----LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 + + G GLNL + + F WW+ Q +R + G Sbjct: 864 NFDTTKNPSNIFVLSLKAGGLGLNLT-AASHVFHFDRWWNPAVENQATDR-----SHRIG 917 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKK 200 +R V V+ I T++E + + L K + + ++ + Sbjct: 918 QQRHVQVHKFICLGTLEERIDEMLERKQGLNEQIVGGSEA 957 >gi|302307807|ref|NP_984563.2| AEL297Wp [Ashbya gossypii ATCC 10895] gi|299789178|gb|AAS52387.2| AEL297Wp [Ashbya gossypii ATCC 10895] Length = 895 Score = 109 bits (272), Expect = 3e-22, Method: Composition-based stats. Identities = 33/166 (19%), Positives = 68/166 (40%), Gaps = 23/166 (13%) Query: 47 HWKEVHDEKIKALE----VIIEKANAAPIIVAYHFNSDLARLQK----------AFPQGR 92 + H K LE I ++N +++ ++ L ++K Sbjct: 646 EVQTTHSSKFAILERFLFKIKHESNDKIVLI-SNYTQTLDLIEKMCRYNHYGVLRLDGTM 704 Query: 93 TLDKDPCTIQEWNE--GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 T++K + ++N+ G+ + + G G+NL G N L+ W+ QQ + R Sbjct: 705 TINKRQKLVDKFNDPSGEEFIFLLSSKAGGCGINL-IGANRLILMDPDWNPAADQQALAR 763 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + + G K+ F+Y I +I+E + QR K ++ +++ Sbjct: 764 VW-----RDGQKKDCFIYRFITTGSIEEKIYQRQSMKMSLSSCVVD 804 >gi|160883987|ref|ZP_02064990.1| hypothetical protein BACOVA_01961 [Bacteroides ovatus ATCC 8483] gi|156110717|gb|EDO12462.1| hypothetical protein BACOVA_01961 [Bacteroides ovatus ATCC 8483] Length = 946 Score = 109 bits (272), Expect = 3e-22, Method: Composition-based stats. Identities = 31/178 (17%), Positives = 63/178 (35%), Gaps = 20/178 (11%) Query: 29 TVKCLQLANGA--VYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQK 86 ++ QL+ + D + + I+ + + ++ +++ F L L + Sbjct: 760 ILRLRQLSCHPQLILPDYTGTSGKTA-QIIETFDTL--QSEGHKVLIFSSFVRHLEVLAE 816 Query: 87 AF---------PQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSL 137 AF G T ++ ++ + + G GLNL + + Sbjct: 817 AFHERGWKYALLTGSTNNRPSEIAHFTDQKDVQAFLISLKAGGVGLNLTQADYVFI-IDP 875 Query: 138 WWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 WW+ Q I R + G + V Y I QN+I+E +L K + + + Sbjct: 876 WWNPAAESQAIAR-----AHRIGQDKQVIAYRFITQNSIEEKILHLQDEKRKLAETFV 928 >gi|260172512|ref|ZP_05758924.1| Snf2 family helicase [Bacteroides sp. D2] gi|315920805|ref|ZP_07917045.1| Snf2 family helicase [Bacteroides sp. D2] gi|313694680|gb|EFS31515.1| Snf2 family helicase [Bacteroides sp. D2] Length = 946 Score = 109 bits (272), Expect = 3e-22, Method: Composition-based stats. Identities = 31/178 (17%), Positives = 63/178 (35%), Gaps = 20/178 (11%) Query: 29 TVKCLQLANGA--VYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQK 86 ++ QL+ + D + + I+ + + ++ +++ F L L + Sbjct: 760 ILRLRQLSCHPQLILPDYTGTSGKTA-QIIETFDTL--QSEGHKVLIFSSFVRHLEVLAE 816 Query: 87 AF---------PQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSL 137 AF G T ++ ++ + + G GLNL + + Sbjct: 817 AFHERGWKYALLTGSTNNRPSEIAHFTDQKDVQAFLISLKAGGVGLNLTQADYVFI-IDP 875 Query: 138 WWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 WW+ Q I R + G + V Y I QN+I+E +L K + + + Sbjct: 876 WWNPAAESQAIAR-----AHRIGQDKQVIAYRFITQNSIEEKILHLQDEKRKLAETFV 928 >gi|259485020|tpe|CBF81736.1| TPA: DNA-dependent ATPase (Eurofung) [Aspergillus nidulans FGSC A4] Length = 833 Score = 109 bits (272), Expect = 3e-22, Method: Composition-based stats. Identities = 35/159 (22%), Positives = 65/159 (40%), Gaps = 19/159 (11%) Query: 58 ALEVIIEKANAAPIIVAYHFNSDLARLQK----------AFPQGRTLDKDPCTIQEWNE- 106 L I + N +++ ++ L +K + K + ++N+ Sbjct: 594 MLARIRQDTNDKIVLI-SNYTQTLDLFEKLCRSRAYGCLRLDGTMNVKKRQKLVDKFNDP 652 Query: 107 -GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 G+ + + G GLNL G N LV F W+ QQ + R+ + G K+ Sbjct: 653 DGEEFVFLLSSKAGGCGLNL-IGANRLVLFDPDWNPAADQQALARVW-----RDGQKKDC 706 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIH 204 FVY IA +I+E + QR K ++ ++++ + H Sbjct: 707 FVYRFIATGSIEEKIFQRQSHKQSLSSCVVDSAEDVERH 745 >gi|67538714|ref|XP_663131.1| hypothetical protein AN5527.2 [Aspergillus nidulans FGSC A4] gi|40743497|gb|EAA62687.1| hypothetical protein AN5527.2 [Aspergillus nidulans FGSC A4] Length = 1776 Score = 109 bits (272), Expect = 3e-22, Method: Composition-based stats. Identities = 35/159 (22%), Positives = 65/159 (40%), Gaps = 19/159 (11%) Query: 58 ALEVIIEKANAAPIIVAYHFNSDLARLQK----------AFPQGRTLDKDPCTIQEWNE- 106 L I + N +++ ++ L +K + K + ++N+ Sbjct: 594 MLARIRQDTNDKIVLI-SNYTQTLDLFEKLCRSRAYGCLRLDGTMNVKKRQKLVDKFNDP 652 Query: 107 -GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 G+ + + G GLNL G N LV F W+ QQ + R+ + G K+ Sbjct: 653 DGEEFVFLLSSKAGGCGLNL-IGANRLVLFDPDWNPAADQQALARVW-----RDGQKKDC 706 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIH 204 FVY IA +I+E + QR K ++ ++++ + H Sbjct: 707 FVYRFIATGSIEEKIFQRQSHKQSLSSCVVDSAEDVERH 745 >gi|228472212|ref|ZP_04056978.1| Non-specific serine/threonine protein kinase [Capnocytophaga gingivalis ATCC 33624] gi|228276415|gb|EEK15139.1| Non-specific serine/threonine protein kinase [Capnocytophaga gingivalis ATCC 33624] Length = 946 Score = 109 bits (272), Expect = 3e-22, Method: Composition-based stats. Identities = 34/185 (18%), Positives = 79/185 (42%), Gaps = 20/185 (10%) Query: 24 NSASKTVKCLQLANGAVYYDEEKHW-KEVHDEKIKALEVIIEKANAAPIIVAYHFNS--- 79 +S + ++ Q++N + D + ++E + LE ++ A A ++ F S Sbjct: 756 HSLNMLMRLRQISNHPLLADPKSDIPSGKYEEVVSCLEQLLLSAQKA--LIFSSFTSHLE 813 Query: 80 ------DLARLQKAFPQGRTL--DKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNI 131 D +++ A G T D+ + + ++P F + GLNL + Sbjct: 814 IYQRWCDEQKIKYALLTGATALPDRKVQVERFQKDKEVPFFFISLKAGEVGLNLT-AASY 872 Query: 132 LVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQ 191 ++ WW+ +Q I R + G ++ V V ++Q+T++E +++ + K + Sbjct: 873 VLLLDPWWNPFAERQAIAR-----AHRLGQEQKVNVIRFVSQHTLEEKIIRLQQHKRELS 927 Query: 192 DLLLN 196 + ++ Sbjct: 928 EHIIE 932 >gi|328768836|gb|EGF78881.1| hypothetical protein BATDEDRAFT_12619 [Batrachochytrium dendrobatidis JAM81] Length = 680 Score = 109 bits (272), Expect = 3e-22, Method: Composition-based stats. Identities = 40/222 (18%), Positives = 78/222 (35%), Gaps = 35/222 (15%) Query: 3 QYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVY---YDEEKHWKEV-------- 51 Y F ++ L + +L N + D E W Sbjct: 362 IYRHFSKQEMNKLAAKE-RGEKPEKAITTLKKLVNHPILLNRDDMEDSWIPKEFSFKECQ 420 Query: 52 --HDEKIKALEVIIEKANAA---PIIVAYHFNSDLARLQK----------AFPQGRTLDK 96 + K+ LE ++ + +A I++ ++ L ++K T+ K Sbjct: 421 PEYSGKMYLLERMLCQMHAQSSDKIVLISNYTQTLDAIEKMCRVRKWQLCRLDGTMTIQK 480 Query: 97 DPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 + +N+ P + + G G+NL G N L+ W+ Q + R+ Sbjct: 481 RQKLVDRFNDPTQPEFIFLLSSKAGGCGINL-IGANRLILTDPDWNPANDAQALARVW-- 537 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + G + F+Y IA TI+E + QR K ++ +++ Sbjct: 538 ---RDGQTKVCFIYRFIATGTIEEKIFQRQAHKQSLSSCVVD 576 >gi|156838524|ref|XP_001642966.1| hypothetical protein Kpol_1071p14 [Vanderwaltozyma polyspora DSM 70294] gi|156113549|gb|EDO15108.1| hypothetical protein Kpol_1071p14 [Vanderwaltozyma polyspora DSM 70294] Length = 353 Score = 109 bits (272), Expect = 3e-22, Method: Composition-based stats. Identities = 40/167 (23%), Positives = 70/167 (41%), Gaps = 21/167 (12%) Query: 44 EEKHWKEVHDEKIKALEVIIEK----ANAAPIIVAYHFNSDLARLQKAF---------PQ 90 + K+ +EV K+K L +++ +N +++ ++ L ++K Sbjct: 45 DSKYNREVDSGKLKVLSELLKSITQISNKEKVVIVSNYTQTLDIIEKMLHSLSLSFTRLD 104 Query: 91 GRTLDKDPCTI-QEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMI 148 G T ++ +I +N + S G GLNL G + L+ F W+ Q + Sbjct: 105 GSTPNRQRDSIVSLFNRSPHVFAFLLSAKSGGVGLNL-IGASRLILFDNDWNPAIDLQAM 163 Query: 149 ERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 RI + G KR F+Y L+ IDE +LQR K ++ L Sbjct: 164 SRI-----HRDGQKRPCFIYRLVTTGCIDEKILQRQLMKHSLSKKFL 205 >gi|308800202|ref|XP_003074882.1| Swr1 Swr1-Pie_related helicase (IC) [Ostreococcus tauri] gi|119358821|emb|CAL52149.3| Swr1 Swr1-Pie_related helicase (IC) [Ostreococcus tauri] Length = 1023 Score = 109 bits (272), Expect = 3e-22, Method: Composition-based stats. Identities = 33/166 (19%), Positives = 65/166 (39%), Gaps = 19/166 (11%) Query: 44 EEKHWKEVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQ---------KAFPQGR 92 +K + K++ L ++ +++ L L+ G Sbjct: 782 PDKQLVQFDCGKLQVLATLLRTLKQGNHKVLIFTQMTRMLDILESFLNLHGYSYCRLDGS 841 Query: 93 TLDKDPCTI-QEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 T + + Q +N + +I + S G G+NL G + ++F+ W+ QQ +R Sbjct: 842 TSTEQRQLLTQRFNGDDRIFIFILSTRSGGFGINLT-GADTVIFYDSDWNPAMDQQAQDR 900 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + G R V +Y LI + TI+E +LQ+ K + + + Sbjct: 901 C-----HRIGQTRDVHIYRLIGEGTIEESILQKAIQKRELDSMAIQ 941 >gi|281206043|gb|EFA80232.1| DEAD-box RNA helicase [Polysphondylium pallidum PN500] Length = 1657 Score = 109 bits (272), Expect = 3e-22, Method: Composition-based stats. Identities = 37/173 (21%), Positives = 70/173 (40%), Gaps = 24/173 (13%) Query: 46 KHWKEVHDEKIKALEV----IIEKANAAPIIVAYHFNSDLARL-----QKAFPQGRTLDK 96 +WK KI AL ++E + ++ + S L + +K R K Sbjct: 1483 DNWK--SSTKIDALMQELDKVMENEPDSKSLIFSQWTSMLDLIEIPLQKKGIAFVRLDGK 1540 Query: 97 DPC-----TIQEW-NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 P +I+ + E I + + G GLNL + + WW+ +Q I+R Sbjct: 1541 VPQKQREISIRRFKEEPNIKVFLISMKAGGLGLNLVVASH-VFLLDPWWNPATEEQAIDR 1599 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETI 203 + + G + VFV + +++I+E +L+ + K + L +KK+ Sbjct: 1600 V-----YRIGQNKNVFVTRFVIKDSIEERILKLQQNKKNLAQDTLQ-MKKQIR 1646 >gi|206558287|sp|A6ZU34|INO80_YEAS7 RecName: Full=Putative DNA helicase INO80; AltName: Full=Inositol-requiring protein 80 gi|151943662|gb|EDN61972.1| inositol requiring protein [Saccharomyces cerevisiae YJM789] Length = 1495 Score = 109 bits (272), Expect = 3e-22, Method: Composition-based stats. Identities = 26/158 (16%), Positives = 64/158 (40%), Gaps = 19/158 (12%) Query: 53 DEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQK----------AFPQGRTLDKDPCT 100 K++ L+ ++ K + +++ + + +++ L+ Sbjct: 1304 SAKLRKLDELLVKLKSEGHRVLIYFQMTKMMDLMEEYLTYRQYNHIRLDGSSKLEDRRDL 1363 Query: 101 IQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQA 159 + +W +I + + G G+NL + ++F+ W+ Q ++R + Sbjct: 1364 VHDWQTNPEIFVFLLSTRAGGLGINLT-AADTVIFYDSDWNPTIDSQAMDR-----AHRL 1417 Query: 160 GFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 G R V VY L+ + TI+E + R + K +Q +++ Sbjct: 1418 GQTRQVTVYRLLVRGTIEERMRDRAKQKEQVQQVVMEG 1455 >gi|6321289|ref|NP_011365.1| Ino80p [Saccharomyces cerevisiae S288c] gi|1723929|sp|P53115|INO80_YEAST RecName: Full=Putative DNA helicase INO80; AltName: Full=Inositol-requiring protein 80 gi|1322734|emb|CAA96861.1| unnamed protein product [Saccharomyces cerevisiae] gi|190407095|gb|EDV10362.1| hypothetical protein SCRG_01143 [Saccharomyces cerevisiae RM11-1a] gi|256272250|gb|EEU07241.1| Ino80p [Saccharomyces cerevisiae JAY291] gi|285812061|tpg|DAA07961.1| TPA: Ino80p [Saccharomyces cerevisiae S288c] Length = 1489 Score = 109 bits (272), Expect = 3e-22, Method: Composition-based stats. Identities = 26/158 (16%), Positives = 64/158 (40%), Gaps = 19/158 (12%) Query: 53 DEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQK----------AFPQGRTLDKDPCT 100 K++ L+ ++ K + +++ + + +++ L+ Sbjct: 1298 SAKLRKLDELLVKLKSEGHRVLIYFQMTKMMDLMEEYLTYRQYNHIRLDGSSKLEDRRDL 1357 Query: 101 IQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQA 159 + +W +I + + G G+NL + ++F+ W+ Q ++R + Sbjct: 1358 VHDWQTNPEIFVFLLSTRAGGLGINLT-AADTVIFYDSDWNPTIDSQAMDR-----AHRL 1411 Query: 160 GFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 G R V VY L+ + TI+E + R + K +Q +++ Sbjct: 1412 GQTRQVTVYRLLVRGTIEERMRDRAKQKEQVQQVVMEG 1449 >gi|242790191|ref|XP_002481516.1| dsDNA-dependent ATPase Rad54, putative [Talaromyces stipitatus ATCC 10500] gi|218718104|gb|EED17524.1| dsDNA-dependent ATPase Rad54, putative [Talaromyces stipitatus ATCC 10500] Length = 808 Score = 109 bits (272), Expect = 3e-22, Method: Composition-based stats. Identities = 35/173 (20%), Positives = 68/173 (39%), Gaps = 18/173 (10%) Query: 44 EEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQK----------AFPQGRT 93 + K W + + I + I++ ++ L +K Sbjct: 554 DIKSWYSGKMMVLDRMLARIRQDTNDKIVLISNYTQTLDLFEKLCRARAYGCLRLDGTMN 613 Query: 94 LDKDPCTIQEWN--EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERI 151 ++K + ++N G+ + + G G+NL G N LV F W+ QQ + R+ Sbjct: 614 VNKRQKLVDKFNDPNGEEFVFLLSSKAGGCGINL-IGANRLVLFDPDWNPAADQQALARV 672 Query: 152 GVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIH 204 + G K+ FVY IA +I+E + QR K ++ ++++ + H Sbjct: 673 W-----RDGQKKDCFVYRFIATGSIEEKIFQRQSHKQSLSSCVVDSAEDVERH 720 >gi|299147035|ref|ZP_07040102.1| Snf2 family protein [Bacteroides sp. 3_1_23] gi|298514920|gb|EFI38802.1| Snf2 family protein [Bacteroides sp. 3_1_23] Length = 946 Score = 109 bits (272), Expect = 3e-22, Method: Composition-based stats. Identities = 31/178 (17%), Positives = 63/178 (35%), Gaps = 20/178 (11%) Query: 29 TVKCLQLANGA--VYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQK 86 ++ QL+ + D + + I+ + + ++ +++ F L L + Sbjct: 760 ILRLRQLSCHPQLILPDYTGTSGKTA-QIIETFDTL--QSEGHKVLIFSSFVRHLEVLAE 816 Query: 87 AF---------PQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSL 137 AF G T ++ ++ + + G GLNL + + Sbjct: 817 AFHERGWKYALLTGSTNNRPSEIAYFTDQKDVQAFLISLKAGGVGLNLTQADYVFI-IDP 875 Query: 138 WWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 WW+ Q I R + G + V Y I QN+I+E +L K + + + Sbjct: 876 WWNPAAESQAIAR-----AHRIGQDKQVIAYRFITQNSIEEKILHLQDEKRKLAETFV 928 >gi|39977783|ref|XP_370279.1| hypothetical protein MGG_06776 [Magnaporthe oryzae 70-15] gi|206558153|sp|A4R227|INO80_MAGO7 RecName: Full=Putative DNA helicase INO80 gi|145013701|gb|EDJ98342.1| hypothetical protein MGG_06776 [Magnaporthe oryzae 70-15] Length = 1944 Score = 109 bits (272), Expect = 3e-22, Method: Composition-based stats. Identities = 29/160 (18%), Positives = 65/160 (40%), Gaps = 19/160 (11%) Query: 51 VHDEKIKALEVII--EKANAAPIIVAYHFNSDLARLQKAF---------PQGRTLDKDPC 99 + K+ L+ ++ KA +++ + + +++ G T +D Sbjct: 1656 TNSGKLAKLDELLFKLKAGGHRVLLYFQMTRMIDLMEEYLTYRNWKYCRLDGSTKFEDRR 1715 Query: 100 T-IQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 + ++ I + + G G+NL + ++F+ W+ Q ++R Sbjct: 1716 DTVHDFQTNPSIFVFLLSTRAGGLGINLT-SADTVIFYDSDWNPTIDSQAMDR-----AH 1769 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + G R V VY LI + TI+E + +R K +Q +++ Sbjct: 1770 RLGQTRQVTVYRLITRGTIEERIRKRAMQKEEVQRVVITG 1809 >gi|293351213|ref|XP_002727727.1| PREDICTED: SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1 [Rattus norvegicus] Length = 1065 Score = 109 bits (272), Expect = 3e-22, Method: Composition-based stats. Identities = 43/230 (18%), Positives = 91/230 (39%), Gaps = 40/230 (17%) Query: 1 MKQY---HKFQRELYCDLQGENIEAFNSASKTVK------CLQL---ANGAVYYD----- 43 +K Y K QRE Y + ++I+ NS+ K K +QL N +D Sbjct: 420 IKIYLGLSKMQREWYTKILMKDIDVLNSSGKMDKMRLLNILMQLRKCCNHPYLFDGAEPG 479 Query: 44 ---EEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQ---------KAFP 89 + K+ AL+ ++ + + +++ L L+ Sbjct: 480 PPYTTDEHIVSNSGKMVALDKLLARIKEQGSRVLIFSQMTRLLDILEDYCMWRGYEYCRL 539 Query: 90 QGRTL-DKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 G+T ++ I+ +N + + G G+NL ++++ + W+ + Q Sbjct: 540 DGQTPHEEREEAIEAFNAPNSSKFIFMLSTRAGGLGINL-ASADVVILYDSDWNPQVDLQ 598 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 ++R + G K+ V V+ LI NT++E +++R K + +++ Sbjct: 599 AMDR-----AHRIGQKKPVRVFRLITDNTVEERIVERAEIKLRLDSIVIQ 643 >gi|50308703|ref|XP_454355.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140] gi|74690158|sp|Q6CNY4|INO80_KLULA RecName: Full=Putative DNA helicase INO80 gi|49643490|emb|CAG99442.1| KLLA0E08999p [Kluyveromyces lactis] Length = 1489 Score = 109 bits (272), Expect = 3e-22, Method: Composition-based stats. Identities = 30/162 (18%), Positives = 65/162 (40%), Gaps = 19/162 (11%) Query: 53 DEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQK----------AFPQGRTLDKDPCT 100 K+K L+ ++ K +++ + + +++ LD Sbjct: 1318 SAKLKKLDELLVKLKEEDHRVLIYFQMTKMMDLMEEYLTYRQYTHIRLDGSSKLDDRRDL 1377 Query: 101 IQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQA 159 + +W + I + + G G+NL + ++F+ W+ Q ++R + Sbjct: 1378 VHDWQTKPDIFIFLLSTRAGGLGINLT-AADTVIFYDSDWNPTIDSQAMDR-----AHRL 1431 Query: 160 GFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 G R V VY L+ + TI+E + R + K +Q +++ KE Sbjct: 1432 GQTRQVTVYRLLIRGTIEERMRDRAKQKEHVQQVVMEGKAKE 1473 >gi|320164565|gb|EFW41464.1| SNF2 family helicase [Capsaspora owczarzaki ATCC 30864] Length = 2959 Score = 109 bits (272), Expect = 3e-22, Method: Composition-based stats. Identities = 39/198 (19%), Positives = 77/198 (38%), Gaps = 19/198 (9%) Query: 12 YCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIE--KANAA 69 + N+ A TV +AN +K + K++ L+ ++ +A Sbjct: 1357 VAQDELANVVGSAVAPLTVPFHPVANAMSAAFPDKRLIQYDCGKLQVLDTLLRDLRAGGH 1416 Query: 70 PIIVAYHFNSDLARLQK----------AFPQGRTLDKDPCTIQEWNEGK-IPLLFAHPAS 118 ++ L L++ T+++ ++ +N K I S Sbjct: 1417 KCLIFTQMTRVLDVLEQFLNFHGYVYLRLDGTTTIEQRQVLMERFNRDKRIFCFILSTRS 1476 Query: 119 CGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDE 178 G G+NL G + ++F+ W+ Q R + G R V +Y LI++ TI+E Sbjct: 1477 GGVGVNLT-GADTVIFYDSDWNPVWDAQA-----QDRAHRIGQTRDVHIYRLISERTIEE 1530 Query: 179 LVLQRLRTKSTIQDLLLN 196 +L+R K + +++N Sbjct: 1531 NILRRANQKRLLDSMVIN 1548 >gi|302309580|ref|NP_987045.2| AGR379Wp [Ashbya gossypii ATCC 10895] gi|299788425|gb|AAS54869.2| AGR379Wp [Ashbya gossypii ATCC 10895] Length = 1414 Score = 109 bits (272), Expect = 3e-22, Method: Composition-based stats. Identities = 28/162 (17%), Positives = 66/162 (40%), Gaps = 19/162 (11%) Query: 53 DEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQK----------AFPQGRTLDKDPCT 100 K+K L+ ++ + A +++ + + +++ L+ Sbjct: 1239 SAKLKKLDELLVRLKAGEHRVLIYFQMTRMMDLIEEYLTYRQYKHIRLDGSSKLEDRRDL 1298 Query: 101 IQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQA 159 + +W + I + + G G+NL + ++F+ W+ Q ++R + Sbjct: 1299 VHDWQTKSDIFIFLLSTRAGGLGINLT-SADTVIFYDSDWNPTIDSQAMDR-----AHRL 1352 Query: 160 GFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 G + V VY L+ + TI+E + R + K +Q +++ KE Sbjct: 1353 GQTKQVTVYRLLIKGTIEERMRDRAKQKEHVQQVVMEGKTKE 1394 >gi|74691592|sp|Q74Z27|INO80_ASHGO RecName: Full=Putative DNA helicase INO80 Length = 1414 Score = 109 bits (272), Expect = 3e-22, Method: Composition-based stats. Identities = 28/162 (17%), Positives = 66/162 (40%), Gaps = 19/162 (11%) Query: 53 DEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQK----------AFPQGRTLDKDPCT 100 K+K L+ ++ + A +++ + + +++ L+ Sbjct: 1239 SAKLKKLDELLVRLKAGEHRVLIYFQMTRMMDLIEEYLTYRQYKHIRLDGSSKLEDRRDL 1298 Query: 101 IQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQA 159 + +W + I + + G G+NL + ++F+ W+ Q ++R + Sbjct: 1299 VHDWQTKSDIFIFLLSTRAGGLGINLT-SADTVIFYDSDWNPTIDSQAMDR-----AHRL 1352 Query: 160 GFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 G + V VY L+ + TI+E + R + K +Q +++ KE Sbjct: 1353 GQTKQVTVYRLLIKGTIEERMRDRAKQKEHVQQVVMEGKTKE 1394 >gi|156845511|ref|XP_001645646.1| hypothetical protein Kpol_541p31 [Vanderwaltozyma polyspora DSM 70294] gi|156116312|gb|EDO17788.1| hypothetical protein Kpol_541p31 [Vanderwaltozyma polyspora DSM 70294] Length = 941 Score = 109 bits (272), Expect = 3e-22, Method: Composition-based stats. Identities = 38/168 (22%), Positives = 65/168 (38%), Gaps = 21/168 (12%) Query: 45 EKHWKEVHDEKIKALEVI---IEKANAAPIIVAYHFNSDL---ARLQKAFPQGR------ 92 K + K LE I + I++ ++ L RL + G Sbjct: 689 SKDVQPQFSGKFAILERFLHKINTESDDKIVLISNYTQTLDLVERLCRRKQYGSVRLDGS 748 Query: 93 -TLDKDPCTIQEWNEGK--IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIE 149 T++K + +N + + G G+NL G N L+ W+ QQ + Sbjct: 749 MTINKRQKLVDRFNSPDSHEFIFLLSSKAGGCGINL-IGANRLILLDPDWNPAADQQALA 807 Query: 150 RIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 R+ + G K+ F+Y IA TI+E V QR K ++ +++A Sbjct: 808 RVW-----RDGQKKDCFIYRFIATGTIEEKVYQRQSMKMSLSSCVVDA 850 >gi|148697109|gb|EDL29056.1| SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, isoform CRA_b [Mus musculus] Length = 1110 Score = 109 bits (272), Expect = 3e-22, Method: Composition-based stats. Identities = 43/230 (18%), Positives = 91/230 (39%), Gaps = 40/230 (17%) Query: 1 MKQY---HKFQRELYCDLQGENIEAFNSASKTVK------CLQL---ANGAVYYD----- 43 +K Y K QRE Y + ++I+ NS+ K K +QL N +D Sbjct: 465 IKIYLGLSKMQREWYTKILMKDIDVLNSSGKMDKMRLLNILMQLRKCCNHPYLFDGAEPG 524 Query: 44 ---EEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQ---------KAFP 89 + K+ AL+ ++ + + +++ L L+ + Sbjct: 525 PPYTTDEHIVGNSGKMVALDKLLARIKEQGSRVLIFSQMTRLLDILEDYCMWRGYEYSRL 584 Query: 90 QGRTL-DKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 G+T ++ I +N + + G G+NL ++++ + W+ + Q Sbjct: 585 DGQTPHEEREEAIDAFNAPNSSKFIFMLSTRAGGLGINL-ASADVVILYDSDWNPQVDLQ 643 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 ++R + G K+ V V+ LI NT++E +++R K + +++ Sbjct: 644 AMDR-----AHRIGQKKPVRVFRLITDNTVEERIVERAEIKLRLDSIVIQ 688 >gi|66361330|pdb|1Z6A|A Chain A, Sulfolobus Solfataricus Swi2SNF2 ATPASE CORE DOMAIN Length = 500 Score = 109 bits (272), Expect = 3e-22, Method: Composition-based stats. Identities = 35/186 (18%), Positives = 68/186 (36%), Gaps = 21/186 (11%) Query: 26 ASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLAR 83 S +K Q+ + + K+ IIE+A I + F Sbjct: 298 LSTLLKLKQIVDHPALLKGGEQSVR-RSGKMIRTMEIIEEALDEGDKIAIFTQFVDMGKI 356 Query: 84 LQKAFPQ----------GRTLDKDPCTI--QEWNEGKIPLLFAHPASCGHGLNLQYGGNI 131 ++ + G K+ I + N + + + G G+NL N Sbjct: 357 IRNIIEKELNTEVPFLYGELSKKERDDIISKFQNNPSVKFIVLSVKAGGFGINLT-SANR 415 Query: 132 LVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQ 191 ++ F WW+ Q +R+ + G R V V+ LI+ T++E + Q L K ++ Sbjct: 416 VIHFDRWWNPAVEDQATDRV-----YRIGQTRNVIVHKLISVGTLEEKIDQLLAFKRSLF 470 Query: 192 DLLLNA 197 ++++ Sbjct: 471 KDIISS 476 >gi|118344288|ref|NP_001071967.1| SWI/SNF protein [Ciona intestinalis] gi|70571306|dbj|BAE06719.1| Ci-SWI/SNF [Ciona intestinalis] Length = 1003 Score = 108 bits (271), Expect = 3e-22, Method: Composition-based stats. Identities = 47/229 (20%), Positives = 93/229 (40%), Gaps = 40/229 (17%) Query: 2 KQY---HKFQRELYCDLQGENIEAFNSASKTVK------CLQL---ANGAVYYD------ 43 K Y K QRE Y + ++I+ N+A +T + +QL N +D Sbjct: 363 KIYTGLSKMQREWYTKILVKDIDIINAAGRTDRVRLLNILMQLRKCCNHPYLFDGAEPGP 422 Query: 44 --EEKHWKEVHDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQ---------KAFPQ 90 V+ K+ L+ ++ + +++ L L+ Sbjct: 423 PYTTSEHLVVNSGKLSVLDKLLPKFQEQGDRVLIFSQMTRILDILEDYCMWRGYNYCRLD 482 Query: 91 GRTLDKDPC-TIQEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQM 147 G+T +D I E+N + + + G G+NL NI++ F W+ + Q Sbjct: 483 GQTPHEDRQRQINEFNRPGSEKFIFMLSTRAGGLGINLMT-ANIVILFDSDWNPQVDMQA 541 Query: 148 IERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 ++R + G K+ V V+ LI +NT++E +++R K + ++++ Sbjct: 542 MDR-----AHRIGQKKQVMVFRLITENTVEERIIERAEMKLHLDNIVIQ 585 >gi|237716743|ref|ZP_04547224.1| Snf2 family helicase [Bacteroides sp. D1] gi|262405519|ref|ZP_06082069.1| Snf2 family helicase [Bacteroides sp. 2_1_22] gi|294646342|ref|ZP_06723989.1| SNF2 family N-terminal domain protein [Bacteroides ovatus SD CC 2a] gi|294806677|ref|ZP_06765508.1| SNF2 family N-terminal domain protein [Bacteroides xylanisolvens SD CC 1b] gi|229442726|gb|EEO48517.1| Snf2 family helicase [Bacteroides sp. D1] gi|262356394|gb|EEZ05484.1| Snf2 family helicase [Bacteroides sp. 2_1_22] gi|292638297|gb|EFF56668.1| SNF2 family N-terminal domain protein [Bacteroides ovatus SD CC 2a] gi|294446097|gb|EFG14733.1| SNF2 family N-terminal domain protein [Bacteroides xylanisolvens SD CC 1b] Length = 946 Score = 108 bits (271), Expect = 3e-22, Method: Composition-based stats. Identities = 31/178 (17%), Positives = 63/178 (35%), Gaps = 20/178 (11%) Query: 29 TVKCLQLANGA--VYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQK 86 ++ QL+ + D + + I+ + + ++ +++ F L L + Sbjct: 760 ILRLRQLSCHPQLILPDYTGTSGKTA-QIIETFDTL--QSEGHKVLIFSSFVRHLEVLAE 816 Query: 87 AFPQ---------GRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSL 137 AF + G T ++ + + + G GLNL + + Sbjct: 817 AFRERGWKYALLTGATNNRPSEIAHFTEQKDVQAFLISLKAGGVGLNLTQADYVFI-IDP 875 Query: 138 WWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 WW+ Q I R + G + V Y I QN+I+E +L K + + + Sbjct: 876 WWNPAAESQAIAR-----AHRIGQDKQVIAYRFITQNSIEEKILHLQDEKRKLAETFV 928 >gi|241950361|ref|XP_002417903.1| SWI/SNF family member, DNA-dependent ATPase, DNA repair and recombination protein, putative [Candida dubliniensis CD36] gi|223641241|emb|CAX45621.1| SWI/SNF family member, DNA-dependent ATPase, DNA repair and recombination protein, putative [Candida dubliniensis CD36] Length = 839 Score = 108 bits (271), Expect = 3e-22, Method: Composition-based stats. Identities = 36/167 (21%), Positives = 68/167 (40%), Gaps = 21/167 (12%) Query: 45 EKHWKEVHDEKIKALEVI---IEKANAAPIIVAYHFNSDLARLQK--AFPQGRTL----- 94 + + K LE I K I++ ++ L ++K + + L Sbjct: 587 NREIQTWFSGKFLILERFLRKINKETDDKIVLISNYTQTLDLIEKMCRYKKYGVLRLDGT 646 Query: 95 ---DKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIE 149 +K + ++N+ P + + G G+NL G N LV W+ QQ + Sbjct: 647 MNINKRQKLVDKFNDPNGPEFIFLLSSKAGGCGINL-IGANRLVLIDPDWNPASDQQALA 705 Query: 150 RIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 R+ + G K+ F+Y LI+ TI+E + QR K ++ +++ Sbjct: 706 RVW-----RDGQKKDCFIYRLISTGTIEEKIFQRQSMKMSLSSCVVD 747 >gi|212534456|ref|XP_002147384.1| dsDNA-dependent ATPase Rad54, putative [Penicillium marneffei ATCC 18224] gi|210069783|gb|EEA23873.1| dsDNA-dependent ATPase Rad54, putative [Penicillium marneffei ATCC 18224] Length = 808 Score = 108 bits (271), Expect = 3e-22, Method: Composition-based stats. Identities = 35/173 (20%), Positives = 68/173 (39%), Gaps = 18/173 (10%) Query: 44 EEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQK----------AFPQGRT 93 + K W + + I + I++ ++ L +K Sbjct: 554 DIKSWYSGKMMVLDRMLARIRQDTNDKIVLISNYTQTLDLFEKLCRSRAYGCLRLDGTMN 613 Query: 94 LDKDPCTIQEWN--EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERI 151 ++K + ++N G+ + + G G+NL G N LV F W+ QQ + R+ Sbjct: 614 VNKRQKLVDKFNDPNGEEFIFLLSSKAGGCGINL-IGANRLVLFDPDWNPAADQQALARV 672 Query: 152 GVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIH 204 + G K+ FVY IA +I+E + QR K ++ ++++ + H Sbjct: 673 W-----RDGQKKDCFVYRFIATGSIEEKIFQRQSHKQSLSSCVVDSAEDVERH 720 >gi|195161916|ref|XP_002021802.1| GL26701 [Drosophila persimilis] gi|292630865|sp|B4GS98|RAD54_DROPE RecName: Full=DNA repair and recombination protein RAD54-like; AltName: Full=Protein okra gi|194103602|gb|EDW25645.1| GL26701 [Drosophila persimilis] Length = 782 Score = 108 bits (271), Expect = 3e-22, Method: Composition-based stats. Identities = 34/173 (19%), Positives = 67/173 (38%), Gaps = 21/173 (12%) Query: 39 AVYYDEEKHWKEVHDEKIKALEVI---IEKANAAPIIVAYHFNSDL---ARLQKAFPQGR 92 + Y+ + K K L+ + I +++ ++ L L + G Sbjct: 482 PINYNPKGEINPELSGKFKLLDFMLAAIRAHGNDKVVLISNYTQTLDLFELLARKRKYGF 541 Query: 93 T-------LDKDPCTIQEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEE 143 + K + +N+ L + G GLNL G N L F W+ Sbjct: 542 VRLDGTMSIKKRSKVVDRFNDPESDCFLFMLSSKAGGCGLNL-IGANRLFMFDPDWNPAN 600 Query: 144 HQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 +Q + R+ + G K+ ++Y L+A +I+E +LQR K ++ +++ Sbjct: 601 DEQAMARVW-----RDGQKKPCYIYRLVASGSIEEKILQRQTHKKSLSSTIID 648 >gi|281209956|gb|EFA84124.1| SNF2-related domain-containing protein [Polysphondylium pallidum PN500] Length = 1905 Score = 108 bits (271), Expect = 3e-22, Method: Composition-based stats. Identities = 40/228 (17%), Positives = 85/228 (37%), Gaps = 44/228 (19%) Query: 6 KFQRELY-CDLQGENIEAF-----NSASKTVKCLQLANGAVYYDEEKHWKEVHD------ 53 +FQ++LY L +++ N+ + QL N + + K D Sbjct: 1119 EFQKKLYRAVLDNNGVDSIIAGKQNALTTMTTLKQLCNYPSLIKSDDYSKYFTDSNDTTT 1178 Query: 54 ------------EKIKALEVIIEKANAAPIIVAYHFNSDLA---------RLQKAFPQGR 92 E ++ L + ++ ++V ++ L +Q G+ Sbjct: 1179 PTDFDASQSGKMEFVEQLLITLKSLGDRAVLV-SNYTQTLDVFELLLKKLSIQSYRIDGQ 1237 Query: 93 TLDKDPCT-IQEWNEGKIP---LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMI 148 + + ++N+ + + G GLNL G N +V + W+ Q + Sbjct: 1238 VKATERQDRVDKFNDPSNKTHTVFLLSSKAGGVGLNL-IGANHIVLYDPDWNPAIDIQAM 1296 Query: 149 ERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 ER+ + G + V +Y L+ TI+E + QR K ++ + +++ Sbjct: 1297 ERVW-----REGQTKPVSIYRLLTAGTIEEKIHQRQIIKESLSNSVVD 1339 >gi|154338690|ref|XP_001565567.1| DNA repair protein [Leishmania braziliensis MHOM/BR/75/M2904] gi|134062619|emb|CAM39061.1| putative DNA repair protein [Leishmania braziliensis MHOM/BR/75/M2904] Length = 1099 Score = 108 bits (271), Expect = 3e-22, Method: Composition-based stats. Identities = 33/161 (20%), Positives = 67/161 (41%), Gaps = 18/161 (11%) Query: 49 KEVHDEKIKALEVIIEKA-NAAPIIVAYHFNSDLAR----LQKAFPQGR------TLDKD 97 K +H K+ A+ IE+ ++V F S L LQ+ F + TL + Sbjct: 926 KPLHGTKLDAIADYIERVPKDEKVVVFSQFGSMLDLMQYWLQRRFIKAVKLCGSLTLTQR 985 Query: 98 PCTIQEW-NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 +Q + ++ + ++ + G GLNLQ N +V WW+ Q ++R Sbjct: 986 QSVLQAFLHDRSVRVILISLKAGGEGLNLQV-ANHVVLTDPWWNPAVEMQAVQR-----A 1039 Query: 157 RQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + G R V + +++++E ++ K + + ++ Sbjct: 1040 HRIGQTRPVHAVRFVTEHSVEERMVDLQEKKMLVFEGTIDG 1080 >gi|269127783|ref|YP_003301153.1| SNF2-like protein [Thermomonospora curvata DSM 43183] gi|268312741|gb|ACY99115.1| SNF2-related protein [Thermomonospora curvata DSM 43183] Length = 990 Score = 108 bits (271), Expect = 4e-22, Method: Composition-based stats. Identities = 40/210 (19%), Positives = 69/210 (32%), Gaps = 23/210 (10%) Query: 3 QYHKFQRELYCDLQGENIEAFN---SASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKAL 59 Y ++ + A + + Q+ N + K++ L Sbjct: 759 LYQATVDDMLAQIAEAGSSAARRGLVLATMARLKQVCNHPAQLLRDGSRLAGRSGKLERL 818 Query: 60 EVI----IEKANAAPIIVAY-HFNSDL-----ARL--QKAFPQGRT--LDKDPCTIQEWN 105 E I +E+ A Y F + L ARL + G T +D + Sbjct: 819 EEICAQVVERGEKALAFTQYAEFGAMLQPYLAARLGCPVLWLHGGTPRRVRDELVRRFQE 878 Query: 106 EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 E + + + G GL L N +V WW+ Q +R + G R V Sbjct: 879 EAEPAVFLLSLKAAGTGLTLT-AANHVVHIDRWWNPAVEDQATDR-----AFRIGQTRDV 932 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 V LI T++E V + + K + ++ Sbjct: 933 QVRKLICVGTLEERVEEMIERKKALAGSVV 962 >gi|58265682|ref|XP_569997.1| DNA supercoiling [Cryptococcus neoformans var. neoformans JEC21] gi|57226229|gb|AAW42690.1| DNA supercoiling, putative [Cryptococcus neoformans var. neoformans JEC21] Length = 993 Score = 108 bits (271), Expect = 4e-22, Method: Composition-based stats. Identities = 40/183 (21%), Positives = 71/183 (38%), Gaps = 24/183 (13%) Query: 36 ANGAVYYDEEKHWKEVHDEKI---KALEVIIEKANAAPIIVAYHFNSDLARLQK------ 86 A A+ D + + + K L I + ++V ++ S L +Q Sbjct: 586 AISAIPSDANINDVTTSGKMLMLDKMLHSIYQCTEEK-VVVVSNWTSTLDLIQGLCKLKR 644 Query: 87 ----AFPQGRTLDKDPCTIQEWNEGK----IPLLFAHPASCGHGLNLQYGGNILVFFSLW 138 + + +N+ K + + G GLNL GG+ L+ F Sbjct: 645 YNYLRLDGSTPPKQRQELVDRFNKDKGRQESFVFLLSAKAGGVGLNL-IGGSRLILFDSD 703 Query: 139 WDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNAL 198 W+ Q + RI + G KR V++Y + N IDE + QR TK+ + D +++ Sbjct: 704 WNPSTDLQAMARI-----HRDGQKRPVYIYRFLTTNAIDEKIYQRQITKTGLSDQMMDQT 758 Query: 199 KKE 201 + E Sbjct: 759 RTE 761 >gi|134109445|ref|XP_776837.1| hypothetical protein CNBC3280 [Cryptococcus neoformans var. neoformans B-3501A] gi|50259517|gb|EAL22190.1| hypothetical protein CNBC3280 [Cryptococcus neoformans var. neoformans B-3501A] Length = 1045 Score = 108 bits (271), Expect = 4e-22, Method: Composition-based stats. Identities = 40/183 (21%), Positives = 71/183 (38%), Gaps = 24/183 (13%) Query: 36 ANGAVYYDEEKHWKEVHDEKI---KALEVIIEKANAAPIIVAYHFNSDLARLQK------ 86 A A+ D + + + K L I + ++V ++ S L +Q Sbjct: 638 AISAIPSDANINDVTTSGKMLMLDKMLHSIYQCTEEK-VVVVSNWTSTLDLIQGLCKLKR 696 Query: 87 ----AFPQGRTLDKDPCTIQEWNEGK----IPLLFAHPASCGHGLNLQYGGNILVFFSLW 138 + + +N+ K + + G GLNL GG+ L+ F Sbjct: 697 YNYLRLDGSTPPKQRQELVDRFNKDKGRQESFVFLLSAKAGGVGLNL-IGGSRLILFDSD 755 Query: 139 WDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNAL 198 W+ Q + RI + G KR V++Y + N IDE + QR TK+ + D +++ Sbjct: 756 WNPSTDLQAMARI-----HRDGQKRPVYIYRFLTTNAIDEKIYQRQITKTGLSDQMMDQT 810 Query: 199 KKE 201 + E Sbjct: 811 RTE 813 >gi|255718981|ref|XP_002555771.1| KLTH0G17028p [Lachancea thermotolerans] gi|238937155|emb|CAR25334.1| KLTH0G17028p [Lachancea thermotolerans] Length = 1000 Score = 108 bits (271), Expect = 4e-22, Method: Composition-based stats. Identities = 32/146 (21%), Positives = 64/146 (43%), Gaps = 18/146 (12%) Query: 63 IEKANAAPIIVAYHFNSDLARLQKA-----FPQGR-----TLDKDPCTIQEWN--EGKIP 110 I+ + I++ ++ L ++K +P R T++K + +N EG+ Sbjct: 770 IKTESDDKIVIISNYTQTLDLIEKMCRSSTYPVVRLDGTMTINKRQKLVDRFNDPEGQEF 829 Query: 111 LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYL 170 + + G G+NL G N L+ W+ QQ + R+ + G K+ F+Y Sbjct: 830 IFLLSSKAGGCGINL-IGANRLILMDPDWNPAADQQALARVW-----RDGQKKDCFIYRF 883 Query: 171 IAQNTIDELVLQRLRTKSTIQDLLLN 196 I +I+E + QR K ++ +++ Sbjct: 884 ICTGSIEEKIYQRQSMKMSLSSCVVD 909 >gi|169600905|ref|XP_001793875.1| hypothetical protein SNOG_03305 [Phaeosphaeria nodorum SN15] gi|160705541|gb|EAT90036.2| hypothetical protein SNOG_03305 [Phaeosphaeria nodorum SN15] Length = 831 Score = 108 bits (271), Expect = 4e-22, Method: Composition-based stats. Identities = 37/175 (21%), Positives = 68/175 (38%), Gaps = 21/175 (12%) Query: 45 EKHWKEVHDEKIKALEVI---IEKANAAPIIVAYHFNSDLARLQK----------AFPQG 91 ++ K + K+ L+ + I I++ ++ L Sbjct: 553 DREVKVWYSGKMLVLDRMLARIRAETNDKIVLISNYTQTLDIFAALCRSRGYGCLRLDGT 612 Query: 92 RTLDKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIE 149 + K + ++N+ + P + + G GLNL G N LV F W+ QQ + Sbjct: 613 MNVSKRQKLVDKFNDPEGPEFVFLLSSKAGGCGLNL-IGANRLVLFDPDWNPAADQQALA 671 Query: 150 RIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIH 204 R+ + G K+ FVY I TI+E V QR K ++ ++++ + H Sbjct: 672 RVW-----RDGQKKDCFVYRFITTGTIEEKVFQRQSHKQSLSSCVVDSAEDVERH 721 >gi|154346446|ref|XP_001569160.1| helicase [Leishmania braziliensis MHOM/BR/75/M2904] gi|134066502|emb|CAM44296.1| putative helicase [Leishmania braziliensis MHOM/BR/75/M2904] Length = 1284 Score = 108 bits (271), Expect = 4e-22, Method: Composition-based stats. Identities = 34/162 (20%), Positives = 74/162 (45%), Gaps = 19/162 (11%) Query: 55 KIKALEVIIEKA--NAAPIIVAYHFNSDLARLQKAF---------PQGRTLDK-DPCTIQ 102 K++ LE ++K + +++ F + L L++ G T + + Sbjct: 869 KLQFLETALKKMRHDGHRVLIFTQFVNMLNILERFLALIGVVYTRLDGSTKAELRQQYVD 928 Query: 103 EWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGF 161 +N + +I + S G GLNL G + ++F+ W+ Q +R + G Sbjct: 929 RFNADPRITCMILSTRSGGIGLNLT-GADTVIFYDSDWNPTMDLQAQDRC-----HRIGQ 982 Query: 162 KRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETI 203 R V +Y LI+++T++E +L++ R + + ++++ + TI Sbjct: 983 TRPVTIYRLISEHTVEESILEKARERKKLNNVVIRGGQFHTI 1024 >gi|299753319|ref|XP_001833199.2| SNF2 family domain-containing protein [Coprinopsis cinerea okayama7#130] gi|298410246|gb|EAU88472.2| SNF2 family domain-containing protein [Coprinopsis cinerea okayama7#130] Length = 840 Score = 108 bits (271), Expect = 4e-22, Method: Composition-based stats. Identities = 34/158 (21%), Positives = 64/158 (40%), Gaps = 19/158 (12%) Query: 59 LEVIIEKANAAPIIVAYHFNSDLARLQK----------AFPQGRTLDKDPCTIQEWN--E 106 L I + N +++ ++ L +K ++ K + ++N Sbjct: 607 LHQIHTQTNDKIVLI-SNYTQTLDLFEKLLRSKKYGYFRLDGTMSITKRQKLVDQFNDPN 665 Query: 107 GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVF 166 GK + + G G+NL G N L+ F W+ QQ + R+ + G K+ F Sbjct: 666 GKEFIFLLSSKAGGCGINL-IGANRLILFDPDWNPAADQQALARVW-----RDGQKKECF 719 Query: 167 VYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIH 204 VY I+ TI+E + QR +K + +++ + H Sbjct: 720 VYRFISTGTIEEKIFQRQASKQALSSAVVDEKEDTERH 757 >gi|284174757|ref|ZP_06388726.1| hypothetical protein Ssol98_08906 [Sulfolobus solfataricus 98/2] Length = 319 Score = 108 bits (271), Expect = 4e-22, Method: Composition-based stats. Identities = 35/186 (18%), Positives = 68/186 (36%), Gaps = 21/186 (11%) Query: 26 ASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLAR 83 S +K Q+ + + K+ IIE+A I + F Sbjct: 117 LSTLLKLKQIVDHPALLKGGEQSVR-RSGKMIRTMEIIEEALDEGDKIAIFTQFVDMGKI 175 Query: 84 LQKAFPQ----------GRTLDKDPCTI--QEWNEGKIPLLFAHPASCGHGLNLQYGGNI 131 ++ + G K+ I + N + + + G G+NL N Sbjct: 176 IRNIIEKELNTEVPFLYGELSKKERDDIISKFQNNPSVKFIVLSVKAGGFGINLT-SANR 234 Query: 132 LVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQ 191 ++ F WW+ Q +R+ + G R V V+ LI+ T++E + Q L K ++ Sbjct: 235 VIHFDRWWNPAVEDQATDRV-----YRIGQTRNVIVHKLISVGTLEEKIDQLLAFKRSLF 289 Query: 192 DLLLNA 197 ++++ Sbjct: 290 KDIISS 295 >gi|254583686|ref|XP_002497411.1| ZYRO0F04906p [Zygosaccharomyces rouxii] gi|238940304|emb|CAR28478.1| ZYRO0F04906p [Zygosaccharomyces rouxii] Length = 848 Score = 108 bits (271), Expect = 4e-22, Method: Composition-based stats. Identities = 36/167 (21%), Positives = 69/167 (41%), Gaps = 21/167 (12%) Query: 46 KHWKEVHDEKIKALEVI---IEKANAAPIIVAYHFNSDLARLQKAFPQGRT--------- 93 K + + K LE I + I++ ++ L ++K Q R Sbjct: 597 KDLQVKYSSKFSILERFLAKIRSESDDKIVIISNYTQTLDLIEKLCRQKRYGSVRLDGTM 656 Query: 94 -LDKDPCTIQEWN--EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 ++K + +N EG+ + + G G+NL G N L+ W+ QQ + R Sbjct: 657 GINKRQKLVDRFNDPEGQEFVFLLSSKAGGCGINL-IGANRLILLDPDWNPAADQQALAR 715 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + + G K+ F+Y I+ +I+E + QR K ++ +++A Sbjct: 716 VW-----RDGQKKDCFIYRFISTGSIEEKIYQRQSMKLSLSSCVVDA 757 >gi|149239498|ref|XP_001525625.1| DNA repair and recombination protein RAD54 [Lodderomyces elongisporus NRRL YB-4239] gi|146451118|gb|EDK45374.1| DNA repair and recombination protein RAD54 [Lodderomyces elongisporus NRRL YB-4239] Length = 875 Score = 108 bits (271), Expect = 4e-22, Method: Composition-based stats. Identities = 33/167 (19%), Positives = 66/167 (39%), Gaps = 21/167 (12%) Query: 45 EKHWKEVHDEKIKALEVI---IEKANAAPIIVAYHFNSDLARLQK----------AFPQG 91 + + K + LE I++ I++ ++ L ++K Sbjct: 623 NREIQTWFSGKFQVLERFLHKIKRETNDKIVLISNYTQTLDLIEKMCRYKKYGALRLDGT 682 Query: 92 RTLDKDPCTIQEWNE--GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIE 149 ++K + +N+ G + + G G+NL G N LV W+ QQ + Sbjct: 683 MNINKRQKLVDRFNDPDGAEFIFLLSSKAGGCGINL-IGANRLVLIDPDWNPASDQQALA 741 Query: 150 RIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 R+ + G K+ F+Y I+ TI+E + QR K ++ +++ Sbjct: 742 RVW-----RDGQKKDCFIYRFISTGTIEEKIFQRQSMKMSLSSCVVD 783 >gi|328865915|gb|EGG14301.1| myb domain-containing protein [Dictyostelium fasciculatum] Length = 1343 Score = 108 bits (271), Expect = 4e-22, Method: Composition-based stats. Identities = 33/167 (19%), Positives = 66/167 (39%), Gaps = 19/167 (11%) Query: 44 EEKHWKEVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQKAF---------PQGR 92 +K + K++ L ++ + ++ L + G Sbjct: 229 PDKRLVQYDCGKLQKLAELLRELKKGGHRALIFTQMTKMLDVFEGFLNLHGYTYVRLDGS 288 Query: 93 TLDKDPCTI-QEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 T + + + +N + +I L S G GLNL G + ++F+ W+ Q +R Sbjct: 289 TKVERRQLLTERFNKDNRIFLFILSTRSGGLGLNLT-GADTVIFYDTDWNPSMDAQAQDR 347 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + G R V +Y LI Q+TI+E +L++ K + D+++ Sbjct: 348 C-----HRIGQTREVHIYRLITQHTIEENILKKSNQKRQLDDMVIQG 389 >gi|304408004|ref|ZP_07389654.1| SNF2-related protein [Paenibacillus curdlanolyticus YK9] gi|304343023|gb|EFM08867.1| SNF2-related protein [Paenibacillus curdlanolyticus YK9] Length = 966 Score = 108 bits (271), Expect = 4e-22, Method: Composition-based stats. Identities = 36/190 (18%), Positives = 62/190 (32%), Gaps = 25/190 (13%) Query: 26 ASKTVKCLQLANGAVY----YDEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNS 79 S K QL + W K L +IE+ A +V F Sbjct: 756 LSALTKLKQLCDHPQLLLGEGVAGDAWDIERSNKTLRLVEMIEEIAAEGEKCLVFTQFVD 815 Query: 80 DLARLQKAFPQ-----------GRTLDKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQ 126 LQ+ + G + I+ + P + G GLNL Sbjct: 816 MGLTLQRLLEERIGLPVPYLHGGVPKAQRDAMIERFQHSDAPGCAFVLSLKAGGTGLNLT 875 Query: 127 YGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRT 186 N + F WW+ Q +R + G + V V+ + T++E + Q + Sbjct: 876 -AANHVFHFDRWWNPAVENQATDR-----AFRIGQTKKVQVHKFVTLGTLEERIDQMIDR 929 Query: 187 KSTIQDLLLN 196 K ++ D +++ Sbjct: 930 KQSLNDQIVS 939 >gi|75759628|ref|ZP_00739713.1| SWF/SNF family helicase [Bacillus thuringiensis serovar israelensis ATCC 35646] gi|74492873|gb|EAO56004.1| SWF/SNF family helicase [Bacillus thuringiensis serovar israelensis ATCC 35646] Length = 168 Score = 108 bits (271), Expect = 4e-22, Method: Composition-based stats. Identities = 33/154 (21%), Positives = 64/154 (41%), Gaps = 17/154 (11%) Query: 53 DEKIKALEVIIEKANAAPIIVAYHFNSDL---------ARLQKAFPQGRTLDKDPCTI-Q 102 +++++ LE + I++ L + + G T ++ + Sbjct: 2 NKRLEILEE-CRQXTGKRILIDSPLTKMLSIIGRELNRQAIPYFYLDGSTPAQERVELCD 60 Query: 103 EWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFK 162 +NEG+ L + G GLNL G + ++ + LWW+ QQ +R + G K Sbjct: 61 RFNEGEGELFLISLKAGGTGLNLT-GADTVILYDLWWNPAVEQQAADR-----AYRMGQK 114 Query: 163 RAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 V V L+AQ TI+E + + +K + ++ Sbjct: 115 NTVQVIKLVAQGTIEEKMHELQESKKNLIAEVIE 148 >gi|298480485|ref|ZP_06998682.1| Snf2 family protein [Bacteroides sp. D22] gi|298273306|gb|EFI14870.1| Snf2 family protein [Bacteroides sp. D22] Length = 946 Score = 108 bits (271), Expect = 4e-22, Method: Composition-based stats. Identities = 31/178 (17%), Positives = 63/178 (35%), Gaps = 20/178 (11%) Query: 29 TVKCLQLANGA--VYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQK 86 ++ QL+ + D + + I+ + + ++ +++ F L L + Sbjct: 760 ILRLRQLSCHPQLILPDYTGTSGKTA-QIIETFDTL--QSEGHKVLIFSSFVKHLEVLAE 816 Query: 87 AFPQ---------GRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSL 137 AF + G T ++ + + + G GLNL + + Sbjct: 817 AFRERGWKYALLTGATNNRPSEIAHFTEQKDVQAFLISLKAGGVGLNLTQADYVFI-IDP 875 Query: 138 WWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 WW+ Q I R + G + V Y I QN+I+E +L K + + + Sbjct: 876 WWNPAAESQAIAR-----AHRIGQDKQVIAYRFITQNSIEEKILHLQDEKRKLAETFV 928 >gi|295086172|emb|CBK67695.1| Superfamily II DNA/RNA helicases, SNF2 family [Bacteroides xylanisolvens XB1A] Length = 946 Score = 108 bits (271), Expect = 4e-22, Method: Composition-based stats. Identities = 31/178 (17%), Positives = 63/178 (35%), Gaps = 20/178 (11%) Query: 29 TVKCLQLANGA--VYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQK 86 ++ QL+ + D + + I+ + + ++ +++ F L L + Sbjct: 760 ILRLRQLSCHPQLILPDYTGTSGKTA-QIIETFDTL--QSEGHKVLIFSSFVKHLEVLAE 816 Query: 87 AFPQ---------GRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSL 137 AF + G T ++ + + + G GLNL + + Sbjct: 817 AFRERGWKYALLTGATNNRPSEIAHFTEQKDVQAFLISLKAGGVGLNLTQADYVFI-IDP 875 Query: 138 WWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 WW+ Q I R + G + V Y I QN+I+E +L K + + + Sbjct: 876 WWNPAAESQAIAR-----AHRIGQDKQVIAYRFITQNSIEEKILHLQDEKRKLAETFV 928 >gi|148697108|gb|EDL29055.1| SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, isoform CRA_a [Mus musculus] Length = 1103 Score = 108 bits (271), Expect = 4e-22, Method: Composition-based stats. Identities = 43/230 (18%), Positives = 91/230 (39%), Gaps = 40/230 (17%) Query: 1 MKQY---HKFQRELYCDLQGENIEAFNSASKTVK------CLQL---ANGAVYYD----- 43 +K Y K QRE Y + ++I+ NS+ K K +QL N +D Sbjct: 458 IKIYLGLSKMQREWYTKILMKDIDVLNSSGKMDKMRLLNILMQLRKCCNHPYLFDGAEPG 517 Query: 44 ---EEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQ---------KAFP 89 + K+ AL+ ++ + + +++ L L+ + Sbjct: 518 PPYTTDEHIVGNSGKMVALDKLLARIKEQGSRVLIFSQMTRLLDILEDYCMWRGYEYSRL 577 Query: 90 QGRTL-DKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 G+T ++ I +N + + G G+NL ++++ + W+ + Q Sbjct: 578 DGQTPHEEREEAIDAFNAPNSSKFIFMLSTRAGGLGINL-ASADVVILYDSDWNPQVDLQ 636 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 ++R + G K+ V V+ LI NT++E +++R K + +++ Sbjct: 637 AMDR-----AHRIGQKKPVRVFRLITDNTVEERIVERAEIKLRLDSIVIQ 681 >gi|322700261|gb|EFY92017.1| Putative DNA helicase ino-80 [Metarhizium acridum CQMa 102] Length = 1925 Score = 108 bits (271), Expect = 4e-22, Method: Composition-based stats. Identities = 28/164 (17%), Positives = 65/164 (39%), Gaps = 19/164 (11%) Query: 47 HWKEVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQKAF---------PQGRTLD 95 H K+ L+ ++ K +++ + + +++ G T Sbjct: 1643 HKFVTDSGKLAKLDELLFKLKNEGHRVLLYFQMTRMIDMMEEYLTYRNYKYCRLDGSTKL 1702 Query: 96 KDPCT-IQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGV 153 +D + ++ +I + + G G+NL + ++F+ W+ Q ++R Sbjct: 1703 EDRRDTVHDFQTRPEIFIFLLSTRAGGLGINLT-SADTVIFYDSDWNPTIDSQAMDR--- 1758 Query: 154 TRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + G + V VY LI + TI+E + +R K +Q +++ Sbjct: 1759 --AHRLGQTKQVTVYRLITRGTIEERIRKRALQKEEVQRVVIQG 1800 >gi|293368877|ref|ZP_06615480.1| SNF2 family N-terminal domain protein [Bacteroides ovatus SD CMC 3f] gi|292636026|gb|EFF54515.1| SNF2 family N-terminal domain protein [Bacteroides ovatus SD CMC 3f] Length = 946 Score = 108 bits (271), Expect = 4e-22, Method: Composition-based stats. Identities = 31/178 (17%), Positives = 63/178 (35%), Gaps = 20/178 (11%) Query: 29 TVKCLQLANGA--VYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQK 86 ++ QL+ + D + + I+ + + ++ +++ F L L + Sbjct: 760 ILRLRQLSCHPQLILPDYTGTSGKTA-QIIETFDTL--QSEGHKVLIFSSFVRHLEVLAE 816 Query: 87 AF---------PQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSL 137 AF G T ++ ++ + + G GLNL + + Sbjct: 817 AFHERGWKYTLLTGSTNNRPSEIAYFTDQKDVQAFLISLKAGGVGLNLTQADYVFI-IDP 875 Query: 138 WWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 WW+ Q I R + G + V Y I QN+I+E +L K + + + Sbjct: 876 WWNPAAESQAIAR-----AHRIGQDKQVIAYRFITQNSIEEKILHLQDEKRKLAETFV 928 >gi|66361321|pdb|1Z5Z|A Chain A, Sulfolobus Solfataricus Swi2SNF2 ATPASE C-Terminal Domain gi|66361322|pdb|1Z5Z|B Chain B, Sulfolobus Solfataricus Swi2SNF2 ATPASE C-Terminal Domain Length = 271 Score = 108 bits (270), Expect = 4e-22, Method: Composition-based stats. Identities = 35/186 (18%), Positives = 68/186 (36%), Gaps = 21/186 (11%) Query: 26 ASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLAR 83 S +K Q+ + + K+ IIE+A I + F Sbjct: 69 LSTLLKLKQIVDHPALLKGGEQSVR-RSGKMIRTMEIIEEALDEGDKIAIFTQFVDMGKI 127 Query: 84 LQKAFPQ----------GRTLDKDPCTI--QEWNEGKIPLLFAHPASCGHGLNLQYGGNI 131 ++ + G K+ I + N + + + G G+NL N Sbjct: 128 IRNIIEKELNTEVPFLYGELSKKERDDIISKFQNNPSVKFIVLSVKAGGFGINLT-SANR 186 Query: 132 LVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQ 191 ++ F WW+ Q +R+ + G R V V+ LI+ T++E + Q L K ++ Sbjct: 187 VIHFDRWWNPAVEDQATDRV-----YRIGQTRNVIVHKLISVGTLEEKIDQLLAFKRSLF 241 Query: 192 DLLLNA 197 ++++ Sbjct: 242 KDIISS 247 >gi|327277378|ref|XP_003223442.1| PREDICTED: probable global transcription activator SNF2L1-like [Anolis carolinensis] Length = 1049 Score = 108 bits (270), Expect = 4e-22, Method: Composition-based stats. Identities = 46/230 (20%), Positives = 91/230 (39%), Gaps = 40/230 (17%) Query: 1 MKQY---HKFQRELYCDLQGENIEAFNSASKTVK------CLQL---ANGAVYYD----- 43 +K Y K QRE Y + ++I+ NSA K K +QL N +D Sbjct: 404 VKIYLGLSKMQREWYTKILMKDIDILNSAGKMDKMRLLNILMQLRKCCNHPYLFDGAEPG 463 Query: 44 ---EEKHWKEVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQ---------KAFP 89 + K+ AL+ ++ K + ++V L L+ Sbjct: 464 PPYTTDTHLVTNSGKMVALDKLLSKLKEQGSRVLVFSQMTRLLDILEDYCMWRGYEYCRL 523 Query: 90 QGRTL-DKDPCTIQEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 G+T ++ I +N + + + G G+NL ++++ + W+ + Q Sbjct: 524 DGQTPHEEREEAIDTFNAPNSRKFVFMLSTRAGGLGINL-ATADVVILYDSDWNPQVDLQ 582 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 ++R + G K+ V V+ LI NT++E +++R K + +++ Sbjct: 583 AMDR-----AHRIGQKKPVRVFRLITDNTVEERIVERAEIKLRLDSIVIQ 627 >gi|148675685|gb|EDL07632.1| transcription termination factor, RNA polymerase II [Mus musculus] Length = 1138 Score = 108 bits (270), Expect = 4e-22, Method: Composition-based stats. Identities = 37/170 (21%), Positives = 69/170 (40%), Gaps = 18/170 (10%) Query: 39 AVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLA---------RLQKAFP 89 A +D+ + +V + LE I + + ++ + S L RL A Sbjct: 957 AELFDDTRRSTKVSS-LLAELEAIQKGPGSQKSVIVSQWTSMLQVVALHLKKNRLTYATI 1015 Query: 90 QGRTLDKDPCT-IQEWNEGKIP-LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQM 147 G K ++ +N + P ++ + G GLNL GGN L + W+ Q Sbjct: 1016 DGSVNPKQRMDLVEAFNHSQGPQVMLISLLAGGVGLNLT-GGNHLFLLDMHWNPSLEDQA 1074 Query: 148 IERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 +RI + G K+ V ++ + + T++E +LQ K + +L+ Sbjct: 1075 CDRI-----YRVGQKKDVVIHRFVCEGTVEEKILQLQEKKKDLAKQVLSG 1119 >gi|17540630|ref|NP_502137.1| hypothetical protein F54E12.2 [Caenorhabditis elegans] gi|3873712|emb|CAA97421.1| C. elegans protein F54E12.2, partially confirmed by transcript evidence [Caenorhabditis elegans] gi|3877578|emb|CAB05213.1| C. elegans protein F54E12.2, partially confirmed by transcript evidence [Caenorhabditis elegans] Length = 1091 Score = 108 bits (270), Expect = 4e-22, Method: Composition-based stats. Identities = 39/154 (25%), Positives = 71/154 (46%), Gaps = 20/154 (12%) Query: 56 IKALEVIIEKANAAPIIVAYHFNSDLARLQKAFP---------QGRTLDKDPCT-IQEWN 105 ++ +E I+EK +++ + S L ++ G+ L KD + +N Sbjct: 923 LEIVENIMEK--KEKVVIVSQWTSVLNLIEIHIKSSGFKYTSITGQVLVKDRQERVDSFN 980 Query: 106 --EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKR 163 +G ++ A+ G GLNL GGN LV L W+ QQ +RI + G K+ Sbjct: 981 REKGGARVMLLSLAAGGVGLNLT-GGNHLVMVDLHWNPALEQQAFDRI-----YRMGQKK 1034 Query: 164 AVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 VF++ L+ + TI++ V+ + K + +L+ Sbjct: 1035 DVFIHRLVTKGTIEQRVVMLQKDKVALASSVLDG 1068 >gi|221501950|gb|EEE27701.1| E1a binding protein P400, putative [Toxoplasma gondii VEG] Length = 2924 Score = 108 bits (270), Expect = 4e-22, Method: Composition-based stats. Identities = 30/166 (18%), Positives = 70/166 (42%), Gaps = 19/166 (11%) Query: 44 EEKHWKEVHDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQK----------AFPQG 91 K + K+ L ++ +A+ ++ F+ L L+ Sbjct: 2540 PHKQTLQDDCGKLIVLAELLTKLRADGHRCLLFTQFSKMLDVLESWINHQGFTYVRLDGS 2599 Query: 92 RTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 +D+ + +N +I L + + G GLNL G + ++F+ W+ +Q ++R Sbjct: 2600 TKVDQRQRVVTRFNANPRIFLFISSTRAGGVGLNLT-GADTVIFYDTDWNPAMDRQAMDR 2658 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + G R V VY L+ +++I+E + ++ K + +++++ Sbjct: 2659 C-----HRIGQTRDVHVYRLVTEHSIEENIWRKQLQKRLLDEVVVD 2699 >gi|237844353|ref|XP_002371474.1| SNF2 family N-terminal domain-containing protein [Toxoplasma gondii ME49] gi|211969138|gb|EEB04334.1| SNF2 family N-terminal domain-containing protein [Toxoplasma gondii ME49] Length = 2894 Score = 108 bits (270), Expect = 4e-22, Method: Composition-based stats. Identities = 30/166 (18%), Positives = 70/166 (42%), Gaps = 19/166 (11%) Query: 44 EEKHWKEVHDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQK----------AFPQG 91 K + K+ L ++ +A+ ++ F+ L L+ Sbjct: 2510 PHKQTLQDDCGKLIVLAELLTKLRADGHRCLLFTQFSKMLDVLESWINHQGFTYVRLDGS 2569 Query: 92 RTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 +D+ + +N +I L + + G GLNL G + ++F+ W+ +Q ++R Sbjct: 2570 TKVDQRQRVVTRFNANPRIFLFISSTRAGGVGLNLT-GADTVIFYDTDWNPAMDRQAMDR 2628 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + G R V VY L+ +++I+E + ++ K + +++++ Sbjct: 2629 C-----HRIGQTRDVHVYRLVTEHSIEENIWRKQLQKRLLDEVVVD 2669 >gi|30840950|gb|AAL29689.1| Snf2-related chromatin remodeling factor SRCAP [Toxoplasma gondii] gi|221481249|gb|EEE19646.1| hypothetical protein TGGT1_072500 [Toxoplasma gondii GT1] Length = 2924 Score = 108 bits (270), Expect = 4e-22, Method: Composition-based stats. Identities = 30/166 (18%), Positives = 70/166 (42%), Gaps = 19/166 (11%) Query: 44 EEKHWKEVHDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQK----------AFPQG 91 K + K+ L ++ +A+ ++ F+ L L+ Sbjct: 2540 PHKQTLQDDCGKLIVLAELLTKLRADGHRCLLFTQFSKMLDVLESWINHQGFTYVRLDGS 2599 Query: 92 RTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 +D+ + +N +I L + + G GLNL G + ++F+ W+ +Q ++R Sbjct: 2600 TKVDQRQRVVTRFNANPRIFLFISSTRAGGVGLNLT-GADTVIFYDTDWNPAMDRQAMDR 2658 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + G R V VY L+ +++I+E + ++ K + +++++ Sbjct: 2659 C-----HRIGQTRDVHVYRLVTEHSIEENIWRKQLQKRLLDEVVVD 2699 >gi|198417079|ref|XP_002130103.1| PREDICTED: similar to RAD54-like [Ciona intestinalis] Length = 775 Score = 108 bits (270), Expect = 4e-22, Method: Composition-based stats. Identities = 40/203 (19%), Positives = 75/203 (36%), Gaps = 32/203 (15%) Query: 26 ASKTVKCLQLANGAVYYDEEKHWKEVHDEKI------------KALEVIIEKANAAPIIV 73 A KCLQ +G D K + + K+ L + + + ++ Sbjct: 489 ALIYEKCLQQESGC--EDMRKIFPSNFNPKLVQPELSGKMKLVDYLLAVTRTSTSDKFVL 546 Query: 74 AYHFNSDLARLQK----------AFPQGRTLDKDPCTIQEWNEGKIP--LLFAHPASCGH 121 ++ L ++ T+ K ++++N P + + G Sbjct: 547 VSNYTQTLDLCEQLCRSRRYMFVRLDGSMTIKKRAKVVEKFNNPSSPEFVFMLSSKAGGC 606 Query: 122 GLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVL 181 GLNL G N LV F W+ +Q + R+ + G K+ F+Y L+ TI+E + Sbjct: 607 GLNL-IGANRLVMFDPDWNPANDEQAMARVW-----RDGQKKPCFIYRLLGTGTIEEKIF 660 Query: 182 QRLRTKSTIQDLLLNALKKETIH 204 QR K + +++ + H Sbjct: 661 QRQAHKKALSSCVVDQEEDVARH 683 >gi|74008383|ref|XP_865586.1| PREDICTED: similar to SWI/SNF-related matrix-associated actin-dependent regulator of chromatin a1 isoform a isoform 19 [Canis familiaris] Length = 1055 Score = 108 bits (270), Expect = 4e-22, Method: Composition-based stats. Identities = 45/233 (19%), Positives = 91/233 (39%), Gaps = 40/233 (17%) Query: 1 MKQY---HKFQRELYCDLQGENIEAFNSASKTVK------CLQL---ANGAVYYD----- 43 +K Y K QRE Y + ++I+ NSA K K +QL N +D Sbjct: 413 IKVYLGLSKMQREWYTKILMKDIDVLNSAGKMDKMRLLNILMQLRKCCNHPYLFDGAEPG 472 Query: 44 ---EEKHWKEVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQ---------KAFP 89 + K+ L+ ++ K + +++ L L+ Sbjct: 473 PPYTTDEHIVSNSGKMVVLDKLLAKLKEQGSRVLIFSQMTRLLDILEDYCMWRGYEYCRL 532 Query: 90 QGRTL-DKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 G+T ++ I+ +N + + G G+NL ++++ + W+ + Q Sbjct: 533 DGQTPHEEREEAIEAFNAPNSSKFIFMLSTRAGGLGINL-ASADVVILYDSDWNPQVDLQ 591 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 ++R + G K+ V V+ LI NT++E +++R K + +++ K Sbjct: 592 AMDR-----AHRIGQKKPVRVFRLITDNTVEERIVERAEIKLRLDSIVIQQGK 639 >gi|322708209|gb|EFY99786.1| Putative DNA helicase ino-80 [Metarhizium anisopliae ARSEF 23] Length = 1927 Score = 108 bits (270), Expect = 5e-22, Method: Composition-based stats. Identities = 27/161 (16%), Positives = 64/161 (39%), Gaps = 19/161 (11%) Query: 50 EVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQKAF---------PQGRTLDKDP 98 K+ L+ ++ K +++ + + +++ G T +D Sbjct: 1648 VTDSGKLAKLDELLFKLKNEGHRVLLYFQMTRMIDMMEEYLTYRNYKYCRLDGSTKLEDR 1707 Query: 99 CT-IQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 + ++ +I + + G G+NL + ++F+ W+ Q ++R Sbjct: 1708 RDTVHDFQTRPEIFIFLLSTRAGGLGINLT-SADTVIFYDSDWNPTIDSQAMDR-----A 1761 Query: 157 RQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + G + V VY LI + TI+E + +R K +Q +++ Sbjct: 1762 HRLGQTKQVTVYRLITRGTIEERIRKRALQKEEVQRVVIQG 1802 >gi|218780869|ref|YP_002432187.1| serine/threonine protein kinase [Desulfatibacillum alkenivorans AK-01] gi|218762253|gb|ACL04719.1| Non-specific serine/threonine protein kinase [Desulfatibacillum alkenivorans AK-01] Length = 896 Score = 108 bits (270), Expect = 5e-22, Method: Composition-based stats. Identities = 31/186 (16%), Positives = 63/186 (33%), Gaps = 20/186 (10%) Query: 26 ASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLAR 83 S ++ Q+ N Y + + K L+ I E+ + ++ F Sbjct: 690 LSFLMRFKQICNHPSQYIGDGEYSPNKSGKFLRLKEICEEIASRQEKALIFTQFREMTDP 749 Query: 84 LQKAFPQ-----------GRTLDKDPCTIQEWNEGK-IPLLFAHPASCGHGLNLQYGGNI 131 L + G + K + + P + G GLNL + Sbjct: 750 LAAYLGEIFGREGLILHGGTPVKKRKNLVDVFQRDDGPPFFVLSLKAGGTGLNLTNASH- 808 Query: 132 LVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQ 191 ++ F WW+ Q +R + G + V V+ + + T++E + + K + Sbjct: 809 VIHFDRWWNPAVENQATDR-----AFRIGQHKNVLVHKFVCRGTLEEKIDALIEEKIGLA 863 Query: 192 DLLLNA 197 + +L A Sbjct: 864 EGVLKA 869 >gi|262050608|ref|NP_444353.3| probable global transcription activator SNF2L1 [Mus musculus] gi|81911462|sp|Q6PGB8|SMCA1_MOUSE RecName: Full=Probable global transcription activator SNF2L1; AltName: Full=ATP-dependent helicase SMARCA1; AltName: Full=DNA-dependent ATPase SNF2L; AltName: Full=Nucleosome-remodeling factor subunit SNF2L; AltName: Full=SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 1 gi|34783716|gb|AAH57115.1| Smarca1 protein [Mus musculus] gi|123123060|emb|CAM19308.1| SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1 [Mus musculus] Length = 1046 Score = 108 bits (270), Expect = 5e-22, Method: Composition-based stats. Identities = 43/230 (18%), Positives = 91/230 (39%), Gaps = 40/230 (17%) Query: 1 MKQY---HKFQRELYCDLQGENIEAFNSASKTVK------CLQL---ANGAVYYD----- 43 +K Y K QRE Y + ++I+ NS+ K K +QL N +D Sbjct: 417 IKIYLGLSKMQREWYTKILMKDIDVLNSSGKMDKMRLLNILMQLRKCCNHPYLFDGAEPG 476 Query: 44 ---EEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQ---------KAFP 89 + K+ AL+ ++ + + +++ L L+ + Sbjct: 477 PPYTTDEHIVGNSGKMVALDKLLARIKEQGSRVLIFSQMTRLLDILEDYCMWRGYEYSRL 536 Query: 90 QGRTL-DKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 G+T ++ I +N + + G G+NL ++++ + W+ + Q Sbjct: 537 DGQTPHEEREEAIDAFNAPNSSKFIFMLSTRAGGLGINL-ASADVVILYDSDWNPQVDLQ 595 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 ++R + G K+ V V+ LI NT++E +++R K + +++ Sbjct: 596 AMDR-----AHRIGQKKPVRVFRLITDNTVEERIVERAEIKLRLDSIVIQ 640 >gi|50553882|ref|XP_504352.1| YALI0E24431p [Yarrowia lipolytica] gi|49650221|emb|CAG79951.1| YALI0E24431p [Yarrowia lipolytica] Length = 940 Score = 108 bits (270), Expect = 5e-22, Method: Composition-based stats. Identities = 39/225 (17%), Positives = 79/225 (35%), Gaps = 37/225 (16%) Query: 3 QYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEK------HWKEVHDEKI 56 Y K E L+ +++F S + ++ N + E+ + K+ Sbjct: 588 IYTKLSSEYLNRLERHQVDSFKS---ILSLRKVCNSPILLSEDGPALDSGKAYLRNSGKM 644 Query: 57 KALEVII---------EKANAAPIIVAYHFNSDLARLQKAFPQGRT----------LDKD 97 L +I + NA +++ F L ++ + Sbjct: 645 NTLFRMIGQLRARNKMDPDNAEKVVIVSSFTQTLDVIEGLVKDLKLSFTRLDGSVQASAR 704 Query: 98 PCTIQEWNE---GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 ++++N + + G G+NL G + L F W+ Q + RI Sbjct: 705 AKIVKQFNSSSADSCFVFLLSARAGGVGINL-IGASRLFLFDPDWNPAVDLQAMARI--- 760 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 + G K+ V++Y L+ IDE + QR K+ + + L+ + Sbjct: 761 --HRDGQKKPVYIYRLLTTGCIDEKIFQRQTIKTGLANSLIEGTE 803 >gi|326445042|ref|ZP_08219776.1| SNF2/RAD54 family helicase [Streptomyces clavuligerus ATCC 27064] Length = 1242 Score = 108 bits (270), Expect = 5e-22, Method: Composition-based stats. Identities = 36/223 (16%), Positives = 71/223 (31%), Gaps = 40/223 (17%) Query: 3 QYHKFQRELYCDLQGENIEAFNS-------ASKTVKCLQLANGAVYY------DEEKHWK 49 Y R+ I A + Q+ N Y D E Sbjct: 1010 LYEANVRDTL-----REITASSGIERRGLVLKLLQALRQICNTPTLYLKEPLEDAEPATL 1064 Query: 50 EVHDEKIKALEVIIEKANAAP--IIVAYHFNSDLARLQKAFPQGRTLD-----------K 96 K+ AL+ ++ A +V + R+ + + R + Sbjct: 1065 ARRSGKLAALDDLMSTLAARSEAALVFTGYVQM-GRILEHHLRARGRSVRFLHGGTPPAR 1123 Query: 97 DPCTIQEWNEGK--IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 + + P+L + G GL L + ++ + W+ Q +R Sbjct: 1124 RQELVDIFQHDPDPAPVLILSVKAAGTGLTLTRAEH-VIHYDRPWNPAVEDQATDR---- 1178 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + G R V V++LI + T+++ + + L K + D +L + Sbjct: 1179 -AHRIGQNRTVQVHHLITEGTVEDHISELLARKRALTDAVLTS 1220 >gi|215446324|ref|ZP_03433076.1| Snf2/Rad54 family helicase [Mycobacterium tuberculosis T85] Length = 547 Score = 108 bits (270), Expect = 5e-22, Method: Composition-based stats. Identities = 36/212 (16%), Positives = 67/212 (31%), Gaps = 25/212 (11%) Query: 3 QYHKFQRELYCDLQGEN--IEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 Y ++ ++ N + K Q+ N ++ K+ LE Sbjct: 314 LYQAVVADMMEKIENTEGIERRGNVLAAMAKLKQVCNHPAQLLHDRSPVGRRSGKVIRLE 373 Query: 61 VIIEKAN--AAPIIVAYHFNSDLARLQKAFP--------------QGRTLDKDPCTIQEW 104 I+E+ ++ F L G + + + Sbjct: 374 EILEEILAEGDRVLCFTQFTEFAELLVPHLAARFGRAARDIAYLHGGTPRKRRDEMVARF 433 Query: 105 NEGK-IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKR 163 G P+ + G GLNL N +V WW+ Q +R + G +R Sbjct: 434 QSGDGPPIFLLSLKAGGTGLNLT-AANHVVHLDRWWNPAVENQATDR-----AFRIGQRR 487 Query: 164 AVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 V V I T++E + + + K + DL++ Sbjct: 488 TVQVRKFICTGTLEEKIDEMIEEKKALADLVV 519 >gi|289758218|ref|ZP_06517596.1| superfamily II DNA/RNA helicase [Mycobacterium tuberculosis T85] gi|289713782|gb|EFD77794.1| superfamily II DNA/RNA helicase [Mycobacterium tuberculosis T85] Length = 545 Score = 108 bits (270), Expect = 5e-22, Method: Composition-based stats. Identities = 36/212 (16%), Positives = 67/212 (31%), Gaps = 25/212 (11%) Query: 3 QYHKFQRELYCDLQGEN--IEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 Y ++ ++ N + K Q+ N ++ K+ LE Sbjct: 312 LYQAVVADMMEKIENTEGIERRGNVLAAMAKLKQVCNHPAQLLHDRSPVGRRSGKVIRLE 371 Query: 61 VIIEKAN--AAPIIVAYHFNSDLARLQKAFP--------------QGRTLDKDPCTIQEW 104 I+E+ ++ F L G + + + Sbjct: 372 EILEEILAEGDRVLCFTQFTEFAELLVPHLAARFGRAARDIAYLHGGTPRKRRDEMVARF 431 Query: 105 NEGK-IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKR 163 G P+ + G GLNL N +V WW+ Q +R + G +R Sbjct: 432 QSGDGPPIFLLSLKAGGTGLNLT-AANHVVHLDRWWNPAVENQATDR-----AFRIGQRR 485 Query: 164 AVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 V V I T++E + + + K + DL++ Sbjct: 486 TVQVRKFICTGTLEEKIDEMIEEKKALADLVV 517 >gi|194210929|ref|XP_001917731.1| PREDICTED: transcription termination factor, RNA polymerase II [Equus caballus] Length = 1167 Score = 108 bits (270), Expect = 5e-22, Method: Composition-based stats. Identities = 36/193 (18%), Positives = 81/193 (41%), Gaps = 22/193 (11%) Query: 16 QGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAY 75 + +N+E ++ + KC Q+ +++ + ++ + LE I + + ++ Sbjct: 967 ELDNLEPSSTVALNGKCFQVE----LFEDVRESTKISS-LLAELEAIRRNSGSQKSVIVS 1021 Query: 76 HFNSDLA----RLQKAFPQGRTLDKDPCT------IQEWNEGKIP-LLFAHPASCGHGLN 124 + S L L++ T+D ++ +N + P ++ + G GLN Sbjct: 1022 QWTSMLKVVALHLKRRGLTYATIDGSVNPKQRMDLVEAFNSSRGPQVMLISLLAGGVGLN 1081 Query: 125 LQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRL 184 L GGN L + W+ Q +RI + G ++ V ++ + + T++E +LQ Sbjct: 1082 LT-GGNHLFLLDMHWNPSLEDQACDRI-----YRVGQQKDVVIHRFVCEGTVEEKILQLQ 1135 Query: 185 RTKSTIQDLLLNA 197 K + +L+ Sbjct: 1136 EKKKDLAKQVLSG 1148 >gi|154277928|ref|XP_001539795.1| DNA repair and recombination protein RAD54 [Ajellomyces capsulatus NAm1] gi|150413380|gb|EDN08763.1| DNA repair and recombination protein RAD54 [Ajellomyces capsulatus NAm1] Length = 684 Score = 108 bits (270), Expect = 5e-22, Method: Composition-based stats. Identities = 34/153 (22%), Positives = 63/153 (41%), Gaps = 19/153 (12%) Query: 64 EKANAAPIIVAYHFNSDL---ARLQK-------AFPQGRTLDKDPCTIQEWN--EGKIPL 111 + N +++ ++ L RL + + K + ++N G+ + Sbjct: 451 DDTNDKIVLI-SNYTQTLDLFERLCRTRRYGCLRLDGTMNVTKRQKLVDKFNDPNGEEFV 509 Query: 112 LFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLI 171 + G G+NL G N LV F W+ QQ + R+ + G K+ FVY I Sbjct: 510 FLLSSKAGGCGINL-IGANRLVLFDPDWNPAADQQALARVW-----RDGQKKDCFVYRFI 563 Query: 172 AQNTIDELVLQRLRTKSTIQDLLLNALKKETIH 204 A TI+E + QR K ++ ++++ + H Sbjct: 564 ATGTIEEKIFQRQSHKQSLSSCVVDSAEDVERH 596 >gi|225441419|ref|XP_002275336.1| PREDICTED: similar to PIE1 (PHOTOPERIOD-INDEPENDENT EARLY FLOWERING 1); ATP binding / DNA binding / helicase [Vitis vinifera] Length = 2049 Score = 108 bits (270), Expect = 5e-22, Method: Composition-based stats. Identities = 37/167 (22%), Positives = 73/167 (43%), Gaps = 19/167 (11%) Query: 44 EEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQ---------KAFPQGR 92 ++ + K++ L V++ K + ++ L L+ G Sbjct: 1038 PDRRLIQFDCGKLQELAVLLRKLKSEGHRALIFTQMTKMLDVLEAFINLYGYTYMRLDGS 1097 Query: 93 TLDKDPCTI-QEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 T ++ T+ Q +N KI + S G G+NL G + ++F+ W+ QQ +R Sbjct: 1098 TQPEERQTLMQRFNTNPKIFIFILSTRSGGVGINL-VGADTVIFYDSDWNPAMDQQAQDR 1156 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + G R V +Y LI+++TI+E +L++ K + DL++ + Sbjct: 1157 C-----HRIGQTREVHIYRLISESTIEENILKKANQKRALDDLVIQS 1198 >gi|254393251|ref|ZP_05008403.1| SNF2/RAD54 family helicase [Streptomyces clavuligerus ATCC 27064] gi|197706890|gb|EDY52702.1| SNF2/RAD54 family helicase [Streptomyces clavuligerus ATCC 27064] Length = 759 Score = 108 bits (269), Expect = 6e-22, Method: Composition-based stats. Identities = 36/223 (16%), Positives = 71/223 (31%), Gaps = 40/223 (17%) Query: 3 QYHKFQRELYCDLQGENIEAFNS-------ASKTVKCLQLANGAVYY------DEEKHWK 49 Y R+ I A + Q+ N Y D E Sbjct: 527 LYEANVRDTL-----REITASSGIERRGLVLKLLQALRQICNTPTLYLKEPLEDAEPATL 581 Query: 50 EVHDEKIKALEVIIEKANAAP--IIVAYHFNSDLARLQKAFPQGRTLD-----------K 96 K+ AL+ ++ A +V + R+ + + R + Sbjct: 582 ARRSGKLAALDDLMSTLAARSEAALVFTGYVQM-GRILEHHLRARGRSVRFLHGGTPPAR 640 Query: 97 DPCTIQEWNEGK--IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 + + P+L + G GL L + ++ + W+ Q +R Sbjct: 641 RQELVDIFQHDPDPAPVLILSVKAAGTGLTLTRAEH-VIHYDRPWNPAVEDQATDR---- 695 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + G R V V++LI + T+++ + + L K + D +L + Sbjct: 696 -AHRIGQNRTVQVHHLITEGTVEDHISELLARKRALTDAVLTS 737 >gi|167383963|ref|XP_001736758.1| helicase [Entamoeba dispar SAW760] gi|165900796|gb|EDR27036.1| helicase, putative [Entamoeba dispar SAW760] Length = 954 Score = 108 bits (269), Expect = 6e-22, Method: Composition-based stats. Identities = 34/166 (20%), Positives = 70/166 (42%), Gaps = 20/166 (12%) Query: 51 VHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLA---------RLQKAFPQGRTLDKDP- 98 + K+ +E ++EK N I++ L ++ G+T +D Sbjct: 404 LSSAKMIVMEKLVEKHLKNNGKILIFSQMTRMLDIIDDYLVFKEIEHYRIDGQTQQEDRV 463 Query: 99 CTIQEWN--EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 I ++N GK+ + S G G+NLQ + ++ + W+ + Q ++R Sbjct: 464 EQINDFNDPNGKVSIFLLSTRSGGLGINLQ-SADTVILYDSDWNPQSDIQAMDR-----A 517 Query: 157 RQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKET 202 + G + V VY LI + T ++ +++ K + L++ + K T Sbjct: 518 HRIGQTKPVTVYRLICEGTAEQRLIRVAERKLMLNRLVMQSGKTAT 563 >gi|74008365|ref|XP_865429.1| PREDICTED: similar to SWI/SNF-related matrix-associated actin-dependent regulator of chromatin a1 isoform a isoform 10 [Canis familiaris] Length = 1050 Score = 108 bits (269), Expect = 6e-22, Method: Composition-based stats. Identities = 44/230 (19%), Positives = 90/230 (39%), Gaps = 40/230 (17%) Query: 1 MKQY---HKFQRELYCDLQGENIEAFNSASKTVK------CLQL---ANGAVYYD----- 43 +K Y K QRE Y + ++I+ NSA K K +QL N +D Sbjct: 421 IKVYLGLSKMQREWYTKILMKDIDVLNSAGKMDKMRLLNILMQLRKCCNHPYLFDGAEPG 480 Query: 44 ---EEKHWKEVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQ---------KAFP 89 + K+ L+ ++ K + +++ L L+ Sbjct: 481 PPYTTDEHIVSNSGKMVVLDKLLAKLKEQGSRVLIFSQMTRLLDILEDYCMWRGYEYCRL 540 Query: 90 QGRTL-DKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 G+T ++ I+ +N + + G G+NL ++++ + W+ + Q Sbjct: 541 DGQTPHEEREEAIEAFNAPNSSKFIFMLSTRAGGLGINL-ASADVVILYDSDWNPQVDLQ 599 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 ++R + G K+ V V+ LI NT++E +++R K + +++ Sbjct: 600 AMDR-----AHRIGQKKPVRVFRLITDNTVEERIVERAEIKLRLDSIVIQ 644 >gi|229490063|ref|ZP_04383916.1| SNF2 family domain protein [Rhodococcus erythropolis SK121] gi|229323164|gb|EEN88932.1| SNF2 family domain protein [Rhodococcus erythropolis SK121] Length = 938 Score = 108 bits (269), Expect = 6e-22, Method: Composition-based stats. Identities = 36/212 (16%), Positives = 76/212 (35%), Gaps = 26/212 (12%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKT--VKCLQLANGAVYYDEEKHWK----EVHDEK 55 Y E+ ++G A + K Q+ N ++ + + K Sbjct: 703 ALYRAVVDEMMAQIKGTEGMKRKGAVLSALTKLKQVCNHPAHFLRDGSPVMRRGQHRSGK 762 Query: 56 IKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQ-----------GRTLDKDPCTIQ 102 + +E I+E A+ +++ F + G + ++ Sbjct: 763 LGLVEDIVESVTADDEKVLLFTQFREFGELVVPYLADRFTTEVPFLHGGVSKAGRDAMVE 822 Query: 103 EWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGF 161 + EG P++ + G GLNL N +V WW+ Q +R+ + G Sbjct: 823 AFQGEGGPPIMVLSLKAGGTGLNLT-AANHVVHLDRWWNPAVENQATDRVF-----RIGQ 876 Query: 162 KRAVFVYYLIAQNTIDELVLQRLRTKSTIQDL 193 ++ V V ++ T++E + + +KS + +L Sbjct: 877 RKNVQVRKMVCVGTLEERIDTMIASKSELAEL 908 >gi|116283949|gb|AAH16071.1| Smarca1 protein [Mus musculus] Length = 1032 Score = 108 bits (269), Expect = 6e-22, Method: Composition-based stats. Identities = 43/230 (18%), Positives = 91/230 (39%), Gaps = 40/230 (17%) Query: 1 MKQY---HKFQRELYCDLQGENIEAFNSASKTVK------CLQL---ANGAVYYD----- 43 +K Y K QRE Y + ++I+ NS+ K K +QL N +D Sbjct: 417 IKIYLGLSKMQREWYTKILMKDIDVLNSSGKMDKMRLLNILMQLRKCCNHPYLFDGAEPG 476 Query: 44 ---EEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQ---------KAFP 89 + K+ AL+ ++ + + +++ L L+ + Sbjct: 477 PPYTTDEHIVGNSGKMVALDKLLARIKEQGSRVLIFSQMTRLLDILEDYCMWRGYEYSRL 536 Query: 90 QGRTL-DKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 G+T ++ I +N + + G G+NL ++++ + W+ + Q Sbjct: 537 DGQTPHEEREEAIDAFNAPNSSKFIFMLSTRAGGLGINL-ASADVVILYDSDWNPQVDLQ 595 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 ++R + G K+ V V+ LI NT++E +++R K + +++ Sbjct: 596 AMDR-----AHRIGQKKPVRVFRLITDNTVEERIVERAEIKLRLDSIVIQ 640 >gi|115654057|ref|XP_001202164.1| PREDICTED: similar to putative recombination factor GdRad54, partial [Strongylocentrotus purpuratus] gi|115679178|ref|XP_790055.2| PREDICTED: similar to putative recombination factor GdRad54, partial [Strongylocentrotus purpuratus] Length = 335 Score = 108 bits (269), Expect = 6e-22, Method: Composition-based stats. Identities = 39/230 (16%), Positives = 84/230 (36%), Gaps = 42/230 (18%) Query: 3 QYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDE------------------ 44 Y ++ + + + + + ++ S +L N + Sbjct: 15 IYQQYVKAMMKECRMKTQGKVSTLSAITHLKKLCNHPALVYDKCVSSKDGFHDMLQNFPP 74 Query: 45 ---EKHWKEVHDEKIKALEVII---EKANAAPIIVAYHFNSDLA------RLQK----AF 88 K + K++ L+ I+ + +++ +++ ++ L RL+ Sbjct: 75 GYNNKQLRPELSGKMQVLDYILAITKTSSSDKVVLVSNYTQTLDVFEQLCRLRGYLFVRL 134 Query: 89 PQGRTLDKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 ++ K + +N P + + G GLNL G N LV F W+ Q Sbjct: 135 DGSMSIKKRAKVVDSFNNPNSPEFIFMLSSKAGGCGLNL-IGANRLVMFDPDWNPANDDQ 193 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + R+ + G K+ F+Y L+A TI+E + QR K + +++ Sbjct: 194 AMARVW-----RDGQKKRCFIYRLLATGTIEEKIFQRQAHKKALSSCVVD 238 >gi|170087336|ref|XP_001874891.1| DNA repair protein, SNF2 family [Laccaria bicolor S238N-H82] gi|164650091|gb|EDR14332.1| DNA repair protein, SNF2 family [Laccaria bicolor S238N-H82] Length = 816 Score = 108 bits (269), Expect = 6e-22, Method: Composition-based stats. Identities = 34/158 (21%), Positives = 63/158 (39%), Gaps = 19/158 (12%) Query: 59 LEVIIEKANAAPIIVAYHFNSDLARLQK----------AFPQGRTLDKDPCTIQEWNE-- 106 L I + +++ ++ L +K T+ K + ++N+ Sbjct: 583 LHQIKTQTTDKIVLI-SNYTQTLDLFEKLCRSKKYGFFRLDGSMTIVKRQKLVDQFNDPD 641 Query: 107 GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVF 166 GK + + G G+NL G N L+ F W+ QQ + R+ + G K+ F Sbjct: 642 GKEFIFLLSSKAGGCGINL-IGANRLILFDPDWNPAADQQALARVW-----RDGQKKECF 695 Query: 167 VYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIH 204 VY I+ TI+E + QR K + +++ + H Sbjct: 696 VYRFISTGTIEEKIFQRQANKQALSSAVVDEKEDAERH 733 >gi|14028667|gb|AAK52453.1|AF325920_1 DNA-dependent ATPase SNF2L [Mus musculus] Length = 1064 Score = 108 bits (269), Expect = 6e-22, Method: Composition-based stats. Identities = 43/230 (18%), Positives = 91/230 (39%), Gaps = 40/230 (17%) Query: 1 MKQY---HKFQRELYCDLQGENIEAFNSASKTVK------CLQL---ANGAVYYD----- 43 +K Y K QRE Y + ++I+ NS+ K K +QL N +D Sbjct: 418 IKIYLGLSKMQREWYTKILMKDIDVLNSSGKMDKMRLLNILMQLRKCCNHPYLFDGAEPG 477 Query: 44 ---EEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQ---------KAFP 89 + K+ AL+ ++ + + +++ L L+ + Sbjct: 478 PPYTTDEHIVGNSGKMVALDKLLARIKEQGSRVLIFSQMTRLLDILEDYCMWRGYEYSRL 537 Query: 90 QGRTL-DKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 G+T ++ I +N + + G G+NL ++++ + W+ + Q Sbjct: 538 DGQTPHEEREEAIDAFNAPNSSKFIFMLSTRAGGLGINL-ASADVVILYDSDWNPQVDLQ 596 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 ++R + G K+ V V+ LI NT++E +++R K + +++ Sbjct: 597 AMDR-----AHRIGQKKPVRVFRLITDNTVEERIVERAEIKLRLDSIVIQ 641 >gi|78214026|ref|YP_382805.1| DEAD/DEAH box helicase-like [Synechococcus sp. CC9605] gi|78198485|gb|ABB36250.1| DEAD/DEAH box helicase-like [Synechococcus sp. CC9605] Length = 1065 Score = 108 bits (269), Expect = 6e-22, Method: Composition-based stats. Identities = 30/188 (15%), Positives = 63/188 (33%), Gaps = 24/188 (12%) Query: 26 ASKTVKCLQLANGAVYYDEEKHWKEVH---DEKIKALEVIIEK--ANAAPIIVAYHFNSD 80 + + Q+ N E + K++ LE I+++ ++ F Sbjct: 860 LALLTRLKQICNHPALALSEGAVDDGFLGRSAKLQRLEEILDEVIEAGDRALLFTQFAEW 919 Query: 81 LARLQKAFPQ-----------GRTLDKDPCTIQEWNEG--KIPLLFAHPASCGHGLNLQY 127 L+ Q G ++ + + E L + G GLNL Sbjct: 920 GHLLRAWMQQRWKSEVPFLHGGTRKNERQAMVDRFQEDPRGPQLFLLSLKAGGVGLNLTR 979 Query: 128 GGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTK 187 + + WW+ Q +R + G V V+ I +++E + + +R K Sbjct: 980 ASH-VFHIDRWWNPAVENQATDR-----AYRIGQTNRVMVHKFITSGSVEEKIDRMIREK 1033 Query: 188 STIQDLLL 195 S + + ++ Sbjct: 1034 SRLAEDVI 1041 >gi|193203249|ref|NP_001032980.2| hypothetical protein T23H2.3 [Caenorhabditis elegans] gi|163644490|gb|AAM15608.2|U80033_3 Hypothetical protein T23H2.3 [Caenorhabditis elegans] Length = 1001 Score = 108 bits (269), Expect = 6e-22, Method: Composition-based stats. Identities = 38/160 (23%), Positives = 69/160 (43%), Gaps = 20/160 (12%) Query: 56 IKALEVIIEKANAAPIIVAYHFNSDLARLQKAF---------PQGRTLDKDPCT-IQEWN 105 ++ + I+EK +++ + S L ++K G+ L KD + +N Sbjct: 829 LEVVREILEK--KEKVVIVSQWTSVLNLVEKHIQAGGHNYTSITGQVLVKDRQERVDSFN 886 Query: 106 --EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKR 163 +G ++ + G GLNL GGN L+ L W+ QQ +RI + G K+ Sbjct: 887 QEKGGAQVMLLSLTAGGVGLNL-IGGNHLIMVDLHWNPALEQQACDRI-----YRMGQKK 940 Query: 164 AVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETI 203 VF++ LI + TI++ V+ K + +L + Sbjct: 941 EVFIHRLIVKGTIEQRVMDLQEKKLALAASVLEGTATRKL 980 >gi|321465306|gb|EFX76308.1| RAD54, DNA repair and recombination protein [Daphnia pulex] Length = 748 Score = 108 bits (269), Expect = 6e-22, Method: Composition-based stats. Identities = 31/153 (20%), Positives = 64/153 (41%), Gaps = 18/153 (11%) Query: 56 IKALEVIIEKANAAPIIVAYHFNSDLARLQK-----AFPQGRT-----LDKDPCTIQEWN 105 + + +++ I++ ++ L +K ++P R + K ++ +N Sbjct: 506 LDCILAMVKSTTNDKIVLISNYTQTLDLFEKLCRMRSYPCVRLDGSMSIKKRAKIVEHFN 565 Query: 106 EGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKR 163 + + + G GLNL G N LV F W+ Q + R+ + G K+ Sbjct: 566 DPASSDFVFLLSSKAGGCGLNL-IGANRLVMFDPDWNPANDDQAMARVW-----RDGQKK 619 Query: 164 AVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 F+Y L++ TI+E + QR K + +++ Sbjct: 620 PCFIYRLLSTGTIEEKIFQRQAHKKALSSCVVD 652 >gi|218753823|ref|ZP_03532619.1| helicase helZ [Mycobacterium tuberculosis GM 1503] gi|289762264|ref|ZP_06521642.1| helicase [Mycobacterium tuberculosis GM 1503] gi|289709770|gb|EFD73786.1| helicase [Mycobacterium tuberculosis GM 1503] Length = 559 Score = 108 bits (269), Expect = 6e-22, Method: Composition-based stats. Identities = 36/212 (16%), Positives = 67/212 (31%), Gaps = 25/212 (11%) Query: 3 QYHKFQRELYCDLQGEN--IEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 Y ++ ++ N + K Q+ N ++ K+ LE Sbjct: 326 LYQAVVADMMEKIENTEGIERRGNVLAAMAKLKQVCNHPAQLLHDRSPVGRRSGKVIRLE 385 Query: 61 VIIEKAN--AAPIIVAYHFNSDLARLQKAFP--------------QGRTLDKDPCTIQEW 104 I+E+ ++ F L G + + + Sbjct: 386 EILEEILAEGDRVLCFTQFTEFAELLVPHLAARFGRAARDIAYLHGGTPRKRRDEMVARF 445 Query: 105 NEGK-IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKR 163 G P+ + G GLNL N +V WW+ Q +R + G +R Sbjct: 446 QSGDGPPIFLLSLKAGGTGLNLT-AANHVVHLDRWWNPAVENQATDR-----AFRIGQRR 499 Query: 164 AVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 V V I T++E + + + K + DL++ Sbjct: 500 TVQVRKFICTGTLEEKIDEMIEEKKALADLVV 531 >gi|123123059|emb|CAM19307.1| SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1 [Mus musculus] Length = 1062 Score = 108 bits (269), Expect = 6e-22, Method: Composition-based stats. Identities = 43/230 (18%), Positives = 91/230 (39%), Gaps = 40/230 (17%) Query: 1 MKQY---HKFQRELYCDLQGENIEAFNSASKTVK------CLQL---ANGAVYYD----- 43 +K Y K QRE Y + ++I+ NS+ K K +QL N +D Sbjct: 417 IKIYLGLSKMQREWYTKILMKDIDVLNSSGKMDKMRLLNILMQLRKCCNHPYLFDGAEPG 476 Query: 44 ---EEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQ---------KAFP 89 + K+ AL+ ++ + + +++ L L+ + Sbjct: 477 PPYTTDEHIVGNSGKMVALDKLLARIKEQGSRVLIFSQMTRLLDILEDYCMWRGYEYSRL 536 Query: 90 QGRTL-DKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 G+T ++ I +N + + G G+NL ++++ + W+ + Q Sbjct: 537 DGQTPHEEREEAIDAFNAPNSSKFIFMLSTRAGGLGINL-ASADVVILYDSDWNPQVDLQ 595 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 ++R + G K+ V V+ LI NT++E +++R K + +++ Sbjct: 596 AMDR-----AHRIGQKKPVRVFRLITDNTVEERIVERAEIKLRLDSIVIQ 640 >gi|156549903|ref|XP_001601964.1| PREDICTED: similar to conserved hypothetical protein [Nasonia vitripennis] Length = 899 Score = 108 bits (269), Expect = 6e-22, Method: Composition-based stats. Identities = 39/160 (24%), Positives = 68/160 (42%), Gaps = 22/160 (13%) Query: 53 DEKIKALEVI---IEKANAAPIIVAYHFNSDLARLQK----------AFPQGRTLDKDPC 99 K+K ++ I I++ N ++V+Y F L L+K Sbjct: 635 SSKVKVVQAIFQAIKRTNEKVVLVSY-FTQTLDFLEKVCCTEGLQFCRLDGHTPAASRTK 693 Query: 100 TIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 + +N L + G GLNL G + L+ F W+ Q + RI Sbjct: 694 LVDRFNSKDNSFCLFLLSAKAGGVGLNL-VGASRLILFDSDWNPANDAQAMARIW----- 747 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + G KR+VF+Y L+ TI+E + QR +K+ + + +++A Sbjct: 748 RDGQKRSVFIYRLLTTGTIEEKIYQRQISKTGLSEAVVDA 787 >gi|123296349|emb|CAI26225.2| transcription termination factor, RNA polymerase II [Mus musculus] Length = 1139 Score = 108 bits (269), Expect = 6e-22, Method: Composition-based stats. Identities = 37/170 (21%), Positives = 69/170 (40%), Gaps = 18/170 (10%) Query: 39 AVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLA---------RLQKAFP 89 A +D+ + +V + LE I + + ++ + S L RL A Sbjct: 958 AELFDDTRRSTKVSS-LLAELEAIQKGPGSQKSVIVSQWTSMLQVVALHLKKNRLTYATI 1016 Query: 90 QGRTLDKDPCT-IQEWNEGKIP-LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQM 147 G K ++ +N + P ++ + G GLNL GGN L + W+ Q Sbjct: 1017 DGSVNPKQRMDLVEAFNHSQGPQVMLISLLAGGVGLNLT-GGNHLFLLDMHWNPSLEDQA 1075 Query: 148 IERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 +RI + G K+ V ++ + + T++E +LQ K + +L+ Sbjct: 1076 CDRI-----YRVGQKKDVVIHRFVCEGTVEEKILQLQEKKKDLAKQVLSG 1120 >gi|56611125|gb|AAH87733.1| Transcription termination factor, RNA polymerase II [Mus musculus] Length = 1138 Score = 108 bits (269), Expect = 6e-22, Method: Composition-based stats. Identities = 37/170 (21%), Positives = 69/170 (40%), Gaps = 18/170 (10%) Query: 39 AVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLA---------RLQKAFP 89 A +D+ + +V + LE I + + ++ + S L RL A Sbjct: 957 AELFDDTRRSTKVSS-LLAELEAIQKGPGSQKSVIVSQWTSMLQVVALHLKKNRLTYATI 1015 Query: 90 QGRTLDKDPCT-IQEWNEGKIP-LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQM 147 G K ++ +N + P ++ + G GLNL GGN L + W+ Q Sbjct: 1016 DGSVNPKQRMDLVEAFNHSQGPQVMLISLLAGGVGLNLT-GGNHLFLLDMHWNPSLEDQA 1074 Query: 148 IERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 +RI + G K+ V ++ + + T++E +LQ K + +L+ Sbjct: 1075 CDRI-----YRVGQKKDVVIHRFVCEGTVEEKILQLQEKKKDLAKQVLSG 1119 >gi|254692909|ref|NP_001013044.2| transcription termination factor 2 [Mus musculus] gi|152031718|sp|Q5NC05|TTF2_MOUSE RecName: Full=Transcription termination factor 2; AltName: Full=RNA polymerase II termination factor; AltName: Full=Transcription release factor 2 gi|66911227|gb|AAH96625.1| Transcription termination factor, RNA polymerase II [Mus musculus] gi|123294595|emb|CAM22070.1| transcription termination factor, RNA polymerase II [Mus musculus] Length = 1138 Score = 108 bits (269), Expect = 6e-22, Method: Composition-based stats. Identities = 37/170 (21%), Positives = 69/170 (40%), Gaps = 18/170 (10%) Query: 39 AVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLA---------RLQKAFP 89 A +D+ + +V + LE I + + ++ + S L RL A Sbjct: 957 AELFDDTRRSTKVSS-LLAELEAIQKGPGSQKSVIVSQWTSMLQVVALHLKKNRLTYATI 1015 Query: 90 QGRTLDKDPCT-IQEWNEGKIP-LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQM 147 G K ++ +N + P ++ + G GLNL GGN L + W+ Q Sbjct: 1016 DGSVNPKQRMDLVEAFNHSQGPQVMLISLLAGGVGLNLT-GGNHLFLLDMHWNPSLEDQA 1074 Query: 148 IERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 +RI + G K+ V ++ + + T++E +LQ K + +L+ Sbjct: 1075 CDRI-----YRVGQKKDVVIHRFVCEGTVEEKILQLQEKKKDLAKQVLSG 1119 >gi|149060085|gb|EDM10901.1| SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1 (predicted) [Rattus norvegicus] Length = 985 Score = 108 bits (269), Expect = 6e-22, Method: Composition-based stats. Identities = 43/230 (18%), Positives = 91/230 (39%), Gaps = 40/230 (17%) Query: 1 MKQY---HKFQRELYCDLQGENIEAFNSASKTVK------CLQL---ANGAVYYD----- 43 +K Y K QRE Y + ++I+ NS+ K K +QL N +D Sbjct: 340 IKIYLGLSKMQREWYTKILMKDIDVLNSSGKMDKMRLLNILMQLRKCCNHPYLFDGAEPG 399 Query: 44 ---EEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQ---------KAFP 89 + K+ AL+ ++ + + +++ L L+ Sbjct: 400 PPYTTDEHIVSNSGKMVALDKLLARIKEQGSRVLIFSQMTRLLDILEDYCMWRGYEYCRL 459 Query: 90 QGRTL-DKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 G+T ++ I+ +N + + G G+NL ++++ + W+ + Q Sbjct: 460 DGQTPHEEREEAIEAFNAPNSSKFIFMLSTRAGGLGINL-ASADVVILYDSDWNPQVDLQ 518 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 ++R + G K+ V V+ LI NT++E +++R K + +++ Sbjct: 519 AMDR-----AHRIGQKKPVRVFRLITDNTVEERIVERAEIKLRLDSIVIQ 563 >gi|74008351|ref|XP_865312.1| PREDICTED: similar to SWI/SNF-related matrix-associated actin-dependent regulator of chromatin a1 isoform a isoform 4 [Canis familiaris] Length = 1042 Score = 108 bits (269), Expect = 6e-22, Method: Composition-based stats. Identities = 44/230 (19%), Positives = 90/230 (39%), Gaps = 40/230 (17%) Query: 1 MKQY---HKFQRELYCDLQGENIEAFNSASKTVK------CLQL---ANGAVYYD----- 43 +K Y K QRE Y + ++I+ NSA K K +QL N +D Sbjct: 413 IKVYLGLSKMQREWYTKILMKDIDVLNSAGKMDKMRLLNILMQLRKCCNHPYLFDGAEPG 472 Query: 44 ---EEKHWKEVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQ---------KAFP 89 + K+ L+ ++ K + +++ L L+ Sbjct: 473 PPYTTDEHIVSNSGKMVVLDKLLAKLKEQGSRVLIFSQMTRLLDILEDYCMWRGYEYCRL 532 Query: 90 QGRTL-DKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 G+T ++ I+ +N + + G G+NL ++++ + W+ + Q Sbjct: 533 DGQTPHEEREEAIEAFNAPNSSKFIFMLSTRAGGLGINL-ASADVVILYDSDWNPQVDLQ 591 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 ++R + G K+ V V+ LI NT++E +++R K + +++ Sbjct: 592 AMDR-----AHRIGQKKPVRVFRLITDNTVEERIVERAEIKLRLDSIVIQ 636 >gi|281202078|gb|EFA76283.1| RUN domain-containing protein [Polysphondylium pallidum PN500] Length = 1467 Score = 108 bits (269), Expect = 6e-22, Method: Composition-based stats. Identities = 35/178 (19%), Positives = 69/178 (38%), Gaps = 25/178 (14%) Query: 38 GAVYYDEEKHWKEVHDEKIKALEVIIEKA----NAAPIIVAYHFNSDLARLQKAFPQGR- 92 A E+ V K+ L I + A I++ + + L R+++ F + R Sbjct: 1269 SAGNVKSEQPDVMVPSTKLTLLMEQINETLSKEKGAKIVIFSQWTTMLDRIEEIFVENRW 1328 Query: 93 -------------TLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLW 138 + + ++ + EG ++ + G G+NL N + W Sbjct: 1329 SESGKYERFDGKMSAKQKKAALENFQMEGGPVVMLISLKAGGVGINLTR-ANKVFLVDPW 1387 Query: 139 WDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 W++ Q I+R+ + G + V V LI +I+E +L+ TK + +L+ Sbjct: 1388 WNVAAENQAIDRL-----HRIGQTKPVTVKKLIITRSIEERILELQETKEVMTQAILD 1440 >gi|257075448|ref|ZP_05569809.1| helicase [Ferroplasma acidarmanus fer1] Length = 1015 Score = 108 bits (269), Expect = 6e-22, Method: Composition-based stats. Identities = 31/186 (16%), Positives = 69/186 (37%), Gaps = 20/186 (10%) Query: 26 ASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLAR 83 S K +L + + + EK+ L ++E+A + +V + Sbjct: 805 LSTITKLKRLLDHPSLVSGDLDRRLDRSEKLVRLREMLEEAIDSNQKTLVFTQYTDAGKI 864 Query: 84 LQKAFPQ-----------GRTLDKDPCTIQEWNEGKIP-LLFAHPASCGHGLNLQYGGNI 131 +++ + + ++ + + P + + G G+NL N Sbjct: 865 IKEEMLKKLGEEALYLNGSTPMSLRQNMVERFQDPDGPKIFIISVKAGGAGINLTAATN- 923 Query: 132 LVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQ 191 ++ F WW+ Q +R + G + V VY I+ TI+E + + KS ++ Sbjct: 924 VIHFDRWWNPSVEDQATDR-----AYRIGQMKNVHVYKFISTGTIEEKIDDIIEGKSMLR 978 Query: 192 DLLLNA 197 + ++ A Sbjct: 979 EKIIGA 984 >gi|87300749|ref|ZP_01083591.1| SNF2 related domain:DEAD/DEAH box helicase:Helicase C-terminal [Synechococcus sp. WH 5701] gi|87284620|gb|EAQ76572.1| SNF2 related domain:DEAD/DEAH box helicase:Helicase C-terminal [Synechococcus sp. WH 5701] Length = 1037 Score = 108 bits (269), Expect = 6e-22, Method: Composition-based stats. Identities = 32/215 (14%), Positives = 70/215 (32%), Gaps = 26/215 (12%) Query: 1 MKQYHKFQRELYCDLQGENIEAFNS--ASKTVKCLQLANGAVYYDEEKHWKEVHDE---K 55 +K Y + + + + + K Q+ N +E K Sbjct: 806 VKLYRRTVEDTLDAIARAPVGQKHGQVLGLLTKLKQVCNHPALMLKEGEVGAGFSARSAK 865 Query: 56 IKALEVIIEK--ANAAPIIVAYHF--------NSDLARLQKAFP---QGRTLDKDPCTIQ 102 ++ LE I+E+ A ++ F R + P + + + Sbjct: 866 LQRLEEIVEEVIAAGDRALLFTQFAEWGHLLQTHLQQRFHQEVPFLYGSTSKGERQAMVD 925 Query: 103 EWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 + + L + G GLNL + + WW+ Q +R + G Sbjct: 926 RFQDDPRGPQLFLLSLKAGGVGLNLTRASH-VFHIDRWWNPAVENQATDR-----AYRIG 979 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 V V+ I +++E + + +R K+ + + ++ Sbjct: 980 QTNRVMVHKFITSGSVEEKIDRMIREKARLAEDIV 1014 >gi|62667352|ref|XP_229124.3| PREDICTED: SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1 [Rattus norvegicus] Length = 1062 Score = 108 bits (269), Expect = 6e-22, Method: Composition-based stats. Identities = 43/230 (18%), Positives = 91/230 (39%), Gaps = 40/230 (17%) Query: 1 MKQY---HKFQRELYCDLQGENIEAFNSASKTVK------CLQL---ANGAVYYD----- 43 +K Y K QRE Y + ++I+ NS+ K K +QL N +D Sbjct: 417 IKIYLGLSKMQREWYTKILMKDIDVLNSSGKMDKMRLLNILMQLRKCCNHPYLFDGAEPG 476 Query: 44 ---EEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQ---------KAFP 89 + K+ AL+ ++ + + +++ L L+ Sbjct: 477 PPYTTDEHIVSNSGKMVALDKLLARIKEQGSRVLIFSQMTRLLDILEDYCMWRGYEYCRL 536 Query: 90 QGRTL-DKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 G+T ++ I+ +N + + G G+NL ++++ + W+ + Q Sbjct: 537 DGQTPHEEREEAIEAFNAPNSSKFIFMLSTRAGGLGINL-ASADVVILYDSDWNPQVDLQ 595 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 ++R + G K+ V V+ LI NT++E +++R K + +++ Sbjct: 596 AMDR-----AHRIGQKKPVRVFRLITDNTVEERIVERAEIKLRLDSIVIQ 640 >gi|255072403|ref|XP_002499876.1| SNF2 super family [Micromonas sp. RCC299] gi|226515138|gb|ACO61134.1| SNF2 super family [Micromonas sp. RCC299] Length = 2637 Score = 108 bits (269), Expect = 7e-22, Method: Composition-based stats. Identities = 33/190 (17%), Positives = 71/190 (37%), Gaps = 28/190 (14%) Query: 27 SKTVKCLQLANGAVYY------DEEKHWKEVHDE--KIKALEVIIEKA--NAAPIIVAYH 76 S ++ + N + ++ +E+ + K+ L+ I+++ +++ Sbjct: 794 SLLMQLRKCCNHPYLFAGTDVPEDGVPVEELVEASGKLAVLDRILKRLKDQGHRVVLFSQ 853 Query: 77 FNSDLARLQK----------AFPQGRTLDKDPCTIQEWNEGKIPLL--FAHPASCGHGLN 124 F S L L + I +N P+ + G G+N Sbjct: 854 FTSMLDILSDFLTLRGYQFARLDGSTNRVQRSIDIAAFNRPNSPMFAFLLSTRAGGLGVN 913 Query: 125 LQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRL 184 LQ + V + W+ + Q + R+ + G K+ V VY L+ T++E + QR Sbjct: 914 LQT-ADTCVLYDSDWNPQVDTQAMARV-----HRIGQKKPVHVYRLVTAGTVEERMQQRA 967 Query: 185 RTKSTIQDLL 194 K ++ ++ Sbjct: 968 EKKLFLEQMV 977 >gi|167629617|ref|YP_001680116.1| snf2 family helicase, putative [Heliobacterium modesticaldum Ice1] gi|167592357|gb|ABZ84105.1| snf2 family helicase, putative [Heliobacterium modesticaldum Ice1] Length = 1006 Score = 108 bits (269), Expect = 7e-22, Method: Composition-based stats. Identities = 31/218 (14%), Positives = 68/218 (31%), Gaps = 29/218 (13%) Query: 3 QYHKFQRELYCDLQGENIEAFNSASKTV--KCLQLANGA--VYYDEEKHWKEVHDEKIKA 58 Y + ++ A A + + QL N + + + K++ Sbjct: 770 LYESVLQAAMEKIEESTGIARRGAILSTLTQLKQLCNHPTLLLKEGKASVLRGRSHKVER 829 Query: 59 LEVIIEKA--NAAPIIVAYHFNSDLARLQKAFP-----------QGRTLDKDPCTIQEWN 105 L ++E+ +V + L++ G + I+ + Sbjct: 830 LVEMVEELRQEGERCLVFTQYVETGHLLKETLEAALGEEVLFLHGGTPASQREKMIERFQ 889 Query: 106 EGK------IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQA 159 + + + G GLNL N + WW+ Q +R + Sbjct: 890 QSDPSPGKGCGVFLLSLKAGGTGLNLT-AANHVFHVDRWWNPAVENQATDR-----AYRI 943 Query: 160 GFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 G R V V+ I T++E + + + K + + ++ Sbjct: 944 GQSRNVHVHKFITLGTLEERIDEMIERKQGLSEEVIGG 981 >gi|302897485|ref|XP_003047621.1| hypothetical protein NECHADRAFT_72504 [Nectria haematococca mpVI 77-13-4] gi|256728552|gb|EEU41908.1| hypothetical protein NECHADRAFT_72504 [Nectria haematococca mpVI 77-13-4] Length = 1861 Score = 108 bits (269), Expect = 7e-22, Method: Composition-based stats. Identities = 29/161 (18%), Positives = 65/161 (40%), Gaps = 19/161 (11%) Query: 50 EVHDEKIKALEVII--EKANAAPIIVAYHFNSDLARLQKAF---------PQGRTLDKDP 98 K+ L+ ++ KA +++ + + +++ G T +D Sbjct: 1580 VTDSGKLAKLDDLLFKLKAENHRVLLYFQMTRMIDMMEEYLTYRNYKYCRLDGSTKLEDR 1639 Query: 99 CT-IQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 + ++ +I + + G G+NL + ++F+ W+ Q ++R Sbjct: 1640 RDTVHDFQTRPEIFIFLLSTRAGGLGINLT-SADTVIFYDSDWNPTIDSQAMDR-----A 1693 Query: 157 RQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + G R V VY LI + TI+E + +R K +Q +++ Sbjct: 1694 HRLGQTRQVTVYRLITRGTIEERIRKRALQKEEVQRVVIQG 1734 >gi|297599769|ref|NP_001047786.2| Os02g0689800 [Oryza sativa Japonica Group] gi|255671175|dbj|BAF09700.2| Os02g0689800 [Oryza sativa Japonica Group] Length = 1059 Score = 108 bits (269), Expect = 7e-22, Method: Composition-based stats. Identities = 35/166 (21%), Positives = 72/166 (43%), Gaps = 19/166 (11%) Query: 44 EEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAF---------PQGR 92 ++ + K++ L +++ + + ++ L L++ G Sbjct: 84 PDRRLIQFDCGKLQELAILLRRLKSEGHRALIFTQMTKMLDILEEFINLYGYTYLRLDGS 143 Query: 93 TLDKDPCTI-QEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 T ++ T+ Q +N K L S G G+NL G + ++F+ W+ QQ +R Sbjct: 144 TQPEERQTLMQRFNTNPKFFLFILSTRSGGVGINL-VGADTVIFYDSDWNPAMDQQAQDR 202 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + G R V +Y LI+++TI+E +L++ K + DL++ Sbjct: 203 C-----HRIGQTREVHIYRLISESTIEENILKKANQKRALDDLVIQ 243 >gi|317126523|ref|YP_004100635.1| SNF2-related protein [Intrasporangium calvum DSM 43043] gi|315590611|gb|ADU49908.1| SNF2-related protein [Intrasporangium calvum DSM 43043] Length = 1043 Score = 108 bits (269), Expect = 7e-22, Method: Composition-based stats. Identities = 37/212 (17%), Positives = 72/212 (33%), Gaps = 28/212 (13%) Query: 3 QYHKFQRELYCDLQGEN--IEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKI--KA 58 Y ++ ++G N + K Q+ N ++ K+ Sbjct: 813 LYQTIVDDMMARIEGSEGIERRGNVLAAMAKLKQVCNHPAQVLHDRSAIGSRSGKVIRLE 872 Query: 59 LEVIIEKANAAPIIVA---------------YHFNSDLARLQKAFPQGRTLDKDPCTIQE 103 + A ++ F++D+A L P+ R +D Q Sbjct: 873 ELLEEILAEGDRVLCFTQYTEFAEMLVPHLSARFDTDVAYLHGGTPKKR---RDELVTQF 929 Query: 104 WNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKR 163 +G P+ + G GLNL N ++ WW+ Q +R + G +R Sbjct: 930 QGDGGAPIFLLSLKAGGTGLNLT-AANHVIHLDRWWNPAVENQATDR-----AYRIGQQR 983 Query: 164 AVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 V V + T++E + Q + K + +L++ Sbjct: 984 RVQVRKFVCTGTLEEKIDQMIEEKLALANLVV 1015 >gi|328867774|gb|EGG16155.1| SNF2-related domain-containing protein [Dictyostelium fasciculatum] Length = 2377 Score = 107 bits (268), Expect = 7e-22, Method: Composition-based stats. Identities = 27/116 (23%), Positives = 54/116 (46%), Gaps = 7/116 (6%) Query: 87 AFPQGRTLDKDPCTIQEWNEGK-IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQ 145 L+ + ++ + I + +CG G+NL + ++FF W+ + Sbjct: 2059 RLDGSSKLEDRRDLVDDFQSDQSIFVFLLSTRACGIGINLT-AADTVIFFDSDWNPTMDE 2117 Query: 146 QMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 Q ++R + G +R V VY L+ + T++E V++R + K IQ +++ K E Sbjct: 2118 QAMDRC-----HRLGQQRPVTVYRLVTKGTVEERVIKRAKQKHQIQSIVIAGGKFE 2168 >gi|72012428|ref|XP_783733.1| PREDICTED: similar to putative recombination factor GdRad54 [Strongylocentrotus purpuratus] gi|115973296|ref|XP_001183354.1| PREDICTED: similar to putative recombination factor GdRad54 [Strongylocentrotus purpuratus] Length = 834 Score = 107 bits (268), Expect = 7e-22, Method: Composition-based stats. Identities = 39/230 (16%), Positives = 84/230 (36%), Gaps = 42/230 (18%) Query: 3 QYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDE------------------ 44 Y ++ + + + + + ++ S +L N + Sbjct: 514 IYQQYVKAMMKECRMKTQGKVSTLSAITHLKKLCNHPALVYDKCVSSKDGFHDMLQNFPP 573 Query: 45 ---EKHWKEVHDEKIKALEVII---EKANAAPIIVAYHFNSDLA------RLQK----AF 88 K + K++ L+ I+ + +++ +++ ++ L RL+ Sbjct: 574 GYNNKQLRPELSGKMQVLDYILAITKTSSSDKVVLVSNYTQTLDVFEQLCRLRGYLFVRL 633 Query: 89 PQGRTLDKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 ++ K + +N P + + G GLNL G N LV F W+ Q Sbjct: 634 DGSMSIKKRAKVVDSFNNPNSPEFIFMLSSKAGGCGLNL-IGANRLVMFDPDWNPANDDQ 692 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + R+ + G K+ F+Y L+A TI+E + QR K + +++ Sbjct: 693 AMARVW-----RDGQKKRCFIYRLLATGTIEEKIFQRQAHKKALSSCVVD 737 >gi|294056083|ref|YP_003549741.1| SNF2-related protein [Coraliomargarita akajimensis DSM 45221] gi|293615416|gb|ADE55571.1| SNF2-related protein [Coraliomargarita akajimensis DSM 45221] Length = 1133 Score = 107 bits (268), Expect = 7e-22, Method: Composition-based stats. Identities = 37/216 (17%), Positives = 73/216 (33%), Gaps = 28/216 (12%) Query: 6 KFQRELYCDLQG--ENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKI----KAL 59 + + E+ E + + ++ Q+ V + K L Sbjct: 915 EVREEIAAAYDDQPEQQAGIVALAAILRLRQV---CVSPELLGKQLPEPAPKFVYMGDRL 971 Query: 60 EVIIEKANAAPIIVAYHFNSDLARLQK----------AFPQGRTLDKDPCTIQEWNEGKI 109 E + +A +V F L +++ + + ++ + G Sbjct: 972 EEL--QAEGNAALVFSQFIGGLDQMEAIARERGVDYLRMDGRTPVGQRREIVRSFQSGDG 1029 Query: 110 P-LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVY 168 P F + G GLNL N + WW+ Q +R + G R+VFV Sbjct: 1030 PSFFFISLKTGGVGLNLTR-ANYVFHLDPWWNPAVENQASDR-----AHRIGQTRSVFVQ 1083 Query: 169 YLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIH 204 LI Q++I+ +L+ K+ + L++ + T Sbjct: 1084 RLIMQHSIEARMLELKARKAELFRQLVDEPGRRTAK 1119 >gi|218289771|ref|ZP_03493971.1| Non-specific serine/threonine protein kinase [Alicyclobacillus acidocaldarius LAA1] gi|218240062|gb|EED07247.1| Non-specific serine/threonine protein kinase [Alicyclobacillus acidocaldarius LAA1] Length = 949 Score = 107 bits (268), Expect = 8e-22, Method: Composition-based stats. Identities = 37/211 (17%), Positives = 75/211 (35%), Gaps = 25/211 (11%) Query: 2 KQYHKFQRELYCDL-QGENIEAFNSASKT--VKCLQLANGAVYYDEEKHWKEVHDEKIKA 58 Y +++ + +G + A A T ++ Q+ + K+++ Sbjct: 713 AMYQALVDQMFAQIARGPSAMARRGAILTTLLRLKQVCDHPALI-SGGRPLAKRSGKLRS 771 Query: 59 LEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQ-----------GRTLDKDPCTIQEWN 105 L + +V F L A G + ++++ Sbjct: 772 LLDRLRVVVDGGEAALVFTQFREMGEMLCAAVEDELGFRPAFLHGGMSAKARGEIVEQYQ 831 Query: 106 EGKI--PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKR 163 G++ P+L + G GLNL N + + WW+ Q +R + G R Sbjct: 832 AGRMESPVLILSLRAGGVGLNLTR-ANHVFHYDRWWNPAVEDQATDR-----AYRIGQLR 885 Query: 164 AVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 V V+ +I T++E + + LR K + D++ Sbjct: 886 GVEVHKMICVGTLEERIDEMLRAKRALSDVV 916 >gi|74008353|ref|XP_865330.1| PREDICTED: similar to SWI/SNF-related matrix-associated actin-dependent regulator of chromatin a1 isoform a isoform 5 [Canis familiaris] Length = 1036 Score = 107 bits (268), Expect = 8e-22, Method: Composition-based stats. Identities = 44/230 (19%), Positives = 90/230 (39%), Gaps = 40/230 (17%) Query: 1 MKQY---HKFQRELYCDLQGENIEAFNSASKTVK------CLQL---ANGAVYYD----- 43 +K Y K QRE Y + ++I+ NSA K K +QL N +D Sbjct: 413 IKVYLGLSKMQREWYTKILMKDIDVLNSAGKMDKMRLLNILMQLRKCCNHPYLFDGAEPG 472 Query: 44 ---EEKHWKEVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQ---------KAFP 89 + K+ L+ ++ K + +++ L L+ Sbjct: 473 PPYTTDEHIVSNSGKMVVLDKLLAKLKEQGSRVLIFSQMTRLLDILEDYCMWRGYEYCRL 532 Query: 90 QGRTL-DKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 G+T ++ I+ +N + + G G+NL ++++ + W+ + Q Sbjct: 533 DGQTPHEEREEAIEAFNAPNSSKFIFMLSTRAGGLGINL-ASADVVILYDSDWNPQVDLQ 591 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 ++R + G K+ V V+ LI NT++E +++R K + +++ Sbjct: 592 AMDR-----AHRIGQKKPVRVFRLITDNTVEERIVERAEIKLRLDSIVIQ 636 >gi|50290001|ref|XP_447432.1| hypothetical protein [Candida glabrata CBS 138] gi|49526742|emb|CAG60369.1| unnamed protein product [Candida glabrata] Length = 942 Score = 107 bits (268), Expect = 8e-22, Method: Composition-based stats. Identities = 33/168 (19%), Positives = 68/168 (40%), Gaps = 21/168 (12%) Query: 45 EKHWKEVHDEKIKALEVI---IEKANAAPIIVAYHFNSDLARLQK----------AFPQG 91 + + K LE I+ + I++ ++ L +++ Sbjct: 690 SRDVQTQFSGKFAILERFLHKIKTESDDKIVLISNYTQTLDLIERMCRNRHYASVRLDGT 749 Query: 92 RTLDKDPCTIQEWN--EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIE 149 +++K + +N EG+ + + G G+NL G N L+ W+ QQ + Sbjct: 750 MSINKRQKLVDRFNDPEGQEFIFLLSSKAGGCGINL-IGANRLILMDPDWNPAADQQALA 808 Query: 150 RIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 R+ + G K+ F+Y I+ TI+E + QR K ++ +++A Sbjct: 809 RVW-----RDGQKKDCFIYRFISTGTIEEKIYQRQSMKMSLSSCVVDA 851 >gi|262199842|ref|YP_003271051.1| SNF2-related protein [Haliangium ochraceum DSM 14365] gi|262083189|gb|ACY19158.1| SNF2-related protein [Haliangium ochraceum DSM 14365] Length = 1121 Score = 107 bits (268), Expect = 8e-22, Method: Composition-based stats. Identities = 31/214 (14%), Positives = 80/214 (37%), Gaps = 24/214 (11%) Query: 1 MKQYHKFQ----RELYCDLQGEN--IEAFNSASKTVKCLQLANG-AVYYDEEKHWKEVHD 53 +K Y REL L+ + + + Q+ A+ + + Sbjct: 893 VKLYRDAVESRGRELLAALRDPEQPVPYMHVFALLTLLKQICCHPALVAGTPAAYGDYRS 952 Query: 54 EKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQKAF---------PQGRTLDKDPCTIQ 102 +K + + ++ ++ + ++V F L ++ GRT + + Sbjct: 953 DKWELAKELVRESLDSGQKVVVYSQFLGMLEIFERHLRALGIGYAKLTGRTRKRGEVVAR 1012 Query: 103 EWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFK 162 ++ + + A + G G++L ++++ + WW+ Q +R+ + G Sbjct: 1013 FQDDPECRVFLASLTAGGVGIDL-VAASVVLHYDRWWNAAREDQATDRV-----HRMGQT 1066 Query: 163 RAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 R V V L+ + T++E + + K + + ++ Sbjct: 1067 RGVQVIKLVTEGTLEEKIAALIAKKRQLMERVVQ 1100 >gi|238814383|ref|NP_001154953.1| RAD54-like [Nasonia vitripennis] Length = 749 Score = 107 bits (268), Expect = 8e-22, Method: Composition-based stats. Identities = 33/153 (21%), Positives = 59/153 (38%), Gaps = 18/153 (11%) Query: 56 IKALEVIIEKANAAPIIVAYHFNSDL---ARL--QKAFPQGRT-----LDKDPCTIQEWN 105 + L I+ I++ ++ L RL ++ + R + K + +N Sbjct: 508 LDCLLAFIKSTTTDKIVLVSNYTQTLDLFERLCAKRKYKYVRLDGTMSIKKRAKVVDNFN 567 Query: 106 EGKI--PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKR 163 + + G GLNL G N LV F W+ Q + R+ + G K+ Sbjct: 568 NPDSGDFIFMLSSKAGGCGLNL-VGANRLVMFDPDWNPANDDQAMARVW-----RDGQKK 621 Query: 164 AVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 FVY + TI+E + QR K + +++ Sbjct: 622 PCFVYRFLCTGTIEEKIFQRQAHKKALSSTVVD 654 >gi|71425488|ref|XP_813116.1| helicase [Trypanosoma cruzi strain CL Brener] gi|70877970|gb|EAN91265.1| helicase, putative [Trypanosoma cruzi] Length = 1191 Score = 107 bits (268), Expect = 8e-22, Method: Composition-based stats. Identities = 29/156 (18%), Positives = 67/156 (42%), Gaps = 19/156 (12%) Query: 55 KIKALEVIIEKA--NAAPIIVAYHFNSDLARLQK----------AFPQGRTLDKDPCTIQ 102 K++ L+ +++ +++ F L L++ ++ + Sbjct: 814 KLQFLQHALKQLRREGHRMLIFTQFVHMLNILERFLAIIGIPYLRIDGSTQAERRQAFVD 873 Query: 103 EWNEGK-IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGF 161 +NE I + S G GLNL G + ++F+ W+ Q +R + G Sbjct: 874 RFNEDDRITCMILSTRSGGIGLNLT-GADTVIFYDSDWNPTMDLQAQDRC-----HRIGQ 927 Query: 162 KRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + V +Y LI+++T++E +LQ+ R + + ++++ Sbjct: 928 TKPVTIYRLISEHTVEENILQKARERKKLNNVVIRG 963 >gi|26326731|dbj|BAC27109.1| unnamed protein product [Mus musculus] Length = 1046 Score = 107 bits (268), Expect = 8e-22, Method: Composition-based stats. Identities = 41/230 (17%), Positives = 89/230 (38%), Gaps = 40/230 (17%) Query: 1 MKQY---HKFQRELYCDLQGENIEAFNSASKTVK---------CLQLANGAVYYD----- 43 +K Y K QRE Y + ++I+ NS+ K K + N +D Sbjct: 417 IKIYLGLSKMQREWYTKILMKDIDVLNSSGKMDKMRLLNILMHLRKCCNHPYLFDGAEPG 476 Query: 44 ---EEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQ---------KAFP 89 + K+ AL+ ++ + + +++ L L+ + Sbjct: 477 PPYTTDEHIVGNSGKMVALDKLLARIKEQGSRVLIFSQMTRLLDILEDYCMWRGYEYSRL 536 Query: 90 QGRTL-DKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 G+T ++ I +N + + G G+NL ++++ + W+ + Q Sbjct: 537 DGQTPHEEREEAIDAFNAPNSSKFIFMLSTRAGGLGINL-ASADVVILYDSDWNPQVDLQ 595 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 ++R + G K+ V V+ LI NT++E +++R K + +++ Sbjct: 596 AMDR-----AHRIGQKKPVRVFRLITDNTVEERIVERAEIKLRLDSIVIQ 640 >gi|296418119|ref|XP_002838689.1| hypothetical protein [Tuber melanosporum Mel28] gi|295634650|emb|CAZ82880.1| unnamed protein product [Tuber melanosporum] Length = 404 Score = 107 bits (268), Expect = 8e-22, Method: Composition-based stats. Identities = 29/155 (18%), Positives = 60/155 (38%), Gaps = 18/155 (11%) Query: 54 EKIKALEVIIEKANAAPIIVAYHFNSDLARLQK----------AFPQGRTLDKDPCTIQE 103 K+ AL + KA +++ + + ++ L+ + Sbjct: 126 AKLDALLTEL-KAGGHRVLLYFQMTKMMDLCEEYLTYRHHRYLRLDGSSKLEDRRDMVSA 184 Query: 104 WNE-GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFK 162 W +I + + G G+NL + ++F+ W+ Q ++R + G Sbjct: 185 WQTTPEIFVFILSTRAGGLGINLT-AADTVIFYDSDWNPTIDSQAMDR-----AHRLGQT 238 Query: 163 RAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 R V VY LI + TI+E + R + K +Q +++ Sbjct: 239 RQVTVYRLITRGTIEERIRTRAKQKEEVQRVVIQG 273 >gi|154338237|ref|XP_001565343.1| DNA repair and recombination protein RAD54 [Leishmania braziliensis MHOM/BR/75/M2904] gi|134062392|emb|CAM42253.1| putative DNA repair and recombination protein RAD54 [Leishmania braziliensis MHOM/BR/75/M2904] Length = 1126 Score = 107 bits (268), Expect = 8e-22, Method: Composition-based stats. Identities = 33/151 (21%), Positives = 61/151 (40%), Gaps = 18/151 (11%) Query: 58 ALEVIIEKANAAPIIVAYHFNSDLA---------RLQKAFPQGRT-LDKDPCTIQEWNEG 107 L+ + E +++ +F L R+ G T + K + +N Sbjct: 800 VLDELRENGEHDKLVIVSNFTQTLDIIAALCNSKRIAYFQLDGSTPIKKRQQLVDYFNVP 859 Query: 108 KIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 + + G GLNL G N L+ F W+ Q + R+ + G K+ V Sbjct: 860 DSQEVVFLLSSKAGGVGLNL-IGANRLILFDPDWNPANDAQAMGRVW-----RDGQKKRV 913 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 F+Y L++ TI+E + QR +K + +++ Sbjct: 914 FIYRLLSTGTIEEKIYQRQVSKQGLSANVVD 944 >gi|67483974|ref|XP_657207.1| helicase [Entamoeba histolytica HM-1:IMSS] gi|56474451|gb|EAL51818.1| helicase, putative [Entamoeba histolytica HM-1:IMSS] Length = 955 Score = 107 bits (268), Expect = 8e-22, Method: Composition-based stats. Identities = 34/166 (20%), Positives = 71/166 (42%), Gaps = 20/166 (12%) Query: 51 VHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARL---------QKAFPQGRTLDKDP- 98 + K+ +E ++EK N I++ L + + G+T +D Sbjct: 404 LSSAKMIVMEKLVEKHLKNNGKILIFSQMTRMLDIIDDYLVFKDIEHYRIDGQTQQEDRV 463 Query: 99 CTIQEWN--EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 I+++N GK+ + S G G+NLQ + ++ + W+ + Q ++R Sbjct: 464 EQIKDFNDPNGKVSIFLLSTRSGGLGINLQ-SADTVILYDSDWNPQSDIQAMDR-----A 517 Query: 157 RQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKET 202 + G + V VY LI + T ++ +++ K + L++ + K T Sbjct: 518 HRIGQTKPVTVYRLICEGTAEQRLIRVAERKLMLNRLVMQSGKTAT 563 >gi|313230046|emb|CBY07750.1| unnamed protein product [Oikopleura dioica] Length = 1656 Score = 107 bits (268), Expect = 9e-22, Method: Composition-based stats. Identities = 41/233 (17%), Positives = 85/233 (36%), Gaps = 48/233 (20%) Query: 7 FQRELYCDLQGENIEAFNSASKTVKCLQLANGA-------------VYYDEEKHWKEVHD 53 Q+ LY + ++ N+ +L N + D +++ + D Sbjct: 1361 LQKRLYEEFTRSKLKKRNATLAIQYLQKLCNHPTLVLTSAHPDYQSIMTDLDRNGSSIRD 1420 Query: 54 ----EKIKALEVIIEKAN----------AAPIIVAYHFNSDLARLQK------------- 86 KIKAL+ ++ + ++ S L +++ Sbjct: 1421 IEHAPKIKALKQLLTECGIGQRNGSVVSEHRALIFCQHKSMLDIIERDLFKSNQLPSVSF 1480 Query: 87 -AFPQGRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEH 144 + +N + I +L G GLNL G ++++F W+ + Sbjct: 1481 SRLDGSVPAGARHGIVSRFNRDPTIDVLLLTTKVGGLGLNLT-GADVVIFVEHDWNPQMD 1539 Query: 145 QQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 Q ++R + G K+ V VY LI +NT++E ++ + K +I + L++ Sbjct: 1540 LQAMDR-----AHRIGQKKTVNVYRLITRNTVEEKIMGLQKFKLSIANSLVSG 1587 >gi|301166647|emb|CBW26223.1| putative helicase [Bacteriovorax marinus SJ] Length = 1063 Score = 107 bits (268), Expect = 9e-22, Method: Composition-based stats. Identities = 38/190 (20%), Positives = 68/190 (35%), Gaps = 27/190 (14%) Query: 21 EAFNSASKTVKCLQLANGA-----VYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAY 75 + ++ Q A +Y D E E+ EK+K + + +V Sbjct: 866 SKVHILEALLRLRQAACHPGLINPLYLDSESAKLEILVEKLKVI-----AKSGEKALVFS 920 Query: 76 HFNSDLARLQKAFP---------QGRTLDKDPCTIQEWNE-GKIPLLFAHPASCGHGLNL 125 F L +Q G+T +++ I E+ E + G GLNL Sbjct: 921 QFTQFLKIVQNRLKAEGIEFSYLDGQTRNREE-VIDEFKEVPDKTAFLISLKAGGFGLNL 979 Query: 126 QYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLR 185 WW+ Q I+RI + G K V+ L+++ T++E +++ + Sbjct: 980 TQ-AKYCFLLDPWWNPAVEGQAIDRI-----HRIGQKSEVYAIKLLSEGTVEEKIIEMQK 1033 Query: 186 TKSTIQDLLL 195 K + D L Sbjct: 1034 RKKKLVDNLF 1043 >gi|297795067|ref|XP_002865418.1| SNF2 domain-containing protein [Arabidopsis lyrata subsp. lyrata] gi|297311253|gb|EFH41677.1| SNF2 domain-containing protein [Arabidopsis lyrata subsp. lyrata] Length = 1305 Score = 107 bits (268), Expect = 9e-22, Method: Composition-based stats. Identities = 46/160 (28%), Positives = 67/160 (41%), Gaps = 19/160 (11%) Query: 42 YDEEKHWKEVH--DEKIKALEVIIEKANAAPIIVAYHFNSDLARL-----QKAFPQGRTL 94 D K+WKE E +K LE I + + IV + S L L +K F R Sbjct: 1127 VDVVKNWKESSKVSELLKCLEKIQKSGSGEKSIVFSQWTSFLDLLEIPLRRKGFEFLRFD 1186 Query: 95 DK-----DPCTIQEWNEGKIP-LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMI 148 K ++E+NE K +L + G GLNL + + WW+ +Q I Sbjct: 1187 GKLAQKGREKVLKEFNETKQKTILLMSLKAGGVGLNLT-AASSVFLMDPWWNPAVEEQAI 1245 Query: 149 ERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKS 188 RI + G KR VFV I ++T++E + Q K Sbjct: 1246 MRI-----HRIGQKRTVFVRRFIVKDTVEERMQQVQARKQ 1280 >gi|74008363|ref|XP_865407.1| PREDICTED: similar to SWI/SNF-related matrix-associated actin-dependent regulator of chromatin a1 isoform a isoform 9 [Canis familiaris] Length = 1053 Score = 107 bits (268), Expect = 9e-22, Method: Composition-based stats. Identities = 44/230 (19%), Positives = 90/230 (39%), Gaps = 40/230 (17%) Query: 1 MKQY---HKFQRELYCDLQGENIEAFNSASKTVK------CLQL---ANGAVYYD----- 43 +K Y K QRE Y + ++I+ NSA K K +QL N +D Sbjct: 405 IKVYLGLSKMQREWYTKILMKDIDVLNSAGKMDKMRLLNILMQLRKCCNHPYLFDGAEPG 464 Query: 44 ---EEKHWKEVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQ---------KAFP 89 + K+ L+ ++ K + +++ L L+ Sbjct: 465 PPYTTDEHIVSNSGKMVVLDKLLAKLKEQGSRVLIFSQMTRLLDILEDYCMWRGYEYCRL 524 Query: 90 QGRTL-DKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 G+T ++ I+ +N + + G G+NL ++++ + W+ + Q Sbjct: 525 DGQTPHEEREEAIEAFNAPNSSKFIFMLSTRAGGLGINL-ASADVVILYDSDWNPQVDLQ 583 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 ++R + G K+ V V+ LI NT++E +++R K + +++ Sbjct: 584 AMDR-----AHRIGQKKPVRVFRLITDNTVEERIVERAEIKLRLDSIVIQ 628 >gi|74008349|ref|XP_865296.1| PREDICTED: similar to SWI/SNF-related matrix-associated actin-dependent regulator of chromatin a1 isoform a isoform 3 [Canis familiaris] Length = 1058 Score = 107 bits (268), Expect = 9e-22, Method: Composition-based stats. Identities = 44/230 (19%), Positives = 90/230 (39%), Gaps = 40/230 (17%) Query: 1 MKQY---HKFQRELYCDLQGENIEAFNSASKTVK------CLQL---ANGAVYYD----- 43 +K Y K QRE Y + ++I+ NSA K K +QL N +D Sbjct: 413 IKVYLGLSKMQREWYTKILMKDIDVLNSAGKMDKMRLLNILMQLRKCCNHPYLFDGAEPG 472 Query: 44 ---EEKHWKEVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQ---------KAFP 89 + K+ L+ ++ K + +++ L L+ Sbjct: 473 PPYTTDEHIVSNSGKMVVLDKLLAKLKEQGSRVLIFSQMTRLLDILEDYCMWRGYEYCRL 532 Query: 90 QGRTL-DKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 G+T ++ I+ +N + + G G+NL ++++ + W+ + Q Sbjct: 533 DGQTPHEEREEAIEAFNAPNSSKFIFMLSTRAGGLGINL-ASADVVILYDSDWNPQVDLQ 591 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 ++R + G K+ V V+ LI NT++E +++R K + +++ Sbjct: 592 AMDR-----AHRIGQKKPVRVFRLITDNTVEERIVERAEIKLRLDSIVIQ 636 >gi|74008355|ref|XP_865346.1| PREDICTED: similar to SWI/SNF-related matrix-associated actin-dependent regulator of chromatin a1 isoform a isoform 6 [Canis familiaris] Length = 1052 Score = 107 bits (268), Expect = 9e-22, Method: Composition-based stats. Identities = 44/230 (19%), Positives = 90/230 (39%), Gaps = 40/230 (17%) Query: 1 MKQY---HKFQRELYCDLQGENIEAFNSASKTVK------CLQL---ANGAVYYD----- 43 +K Y K QRE Y + ++I+ NSA K K +QL N +D Sbjct: 407 IKVYLGLSKMQREWYTKILMKDIDVLNSAGKMDKMRLLNILMQLRKCCNHPYLFDGAEPG 466 Query: 44 ---EEKHWKEVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQ---------KAFP 89 + K+ L+ ++ K + +++ L L+ Sbjct: 467 PPYTTDEHIVSNSGKMVVLDKLLAKLKEQGSRVLIFSQMTRLLDILEDYCMWRGYEYCRL 526 Query: 90 QGRTL-DKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 G+T ++ I+ +N + + G G+NL ++++ + W+ + Q Sbjct: 527 DGQTPHEEREEAIEAFNAPNSSKFIFMLSTRAGGLGINL-ASADVVILYDSDWNPQVDLQ 585 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 ++R + G K+ V V+ LI NT++E +++R K + +++ Sbjct: 586 AMDR-----AHRIGQKKPVRVFRLITDNTVEERIVERAEIKLRLDSIVIQ 630 >gi|255946938|ref|XP_002564236.1| Pc22g01920 [Penicillium chrysogenum Wisconsin 54-1255] gi|211591253|emb|CAP97480.1| Pc22g01920 [Penicillium chrysogenum Wisconsin 54-1255] Length = 819 Score = 107 bits (268), Expect = 9e-22, Method: Composition-based stats. Identities = 36/173 (20%), Positives = 66/173 (38%), Gaps = 18/173 (10%) Query: 44 EEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQK----------AFPQGRT 93 + K W + + I + I++ ++ L +K Sbjct: 565 DIKSWYSGKMMVLDRMLARIRQDTNDKIVLISNYTQTLDLFEKLCRSRGYGSLRLDGTMN 624 Query: 94 LDKDPCTIQEWNE--GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERI 151 + K + +N G+ + + G GLNL G N LV F W+ QQ + R+ Sbjct: 625 IKKRTKLVDTFNNPDGQEFVFLLSSKAGGCGLNL-IGANRLVLFDPDWNPAADQQALARV 683 Query: 152 GVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIH 204 + G K+ FVY IA +I+E + QR K ++ ++++ + H Sbjct: 684 W-----RDGQKKDCFVYRFIATGSIEEKIFQRQSHKQSLSSCVVDSAEDVERH 731 >gi|158293531|ref|XP_557901.3| AGAP008748-PA [Anopheles gambiae str. PEST] gi|157016752|gb|EAL40287.3| AGAP008748-PA [Anopheles gambiae str. PEST] Length = 789 Score = 107 bits (268), Expect = 9e-22, Method: Composition-based stats. Identities = 33/161 (20%), Positives = 63/161 (39%), Gaps = 18/161 (11%) Query: 56 IKALEVIIEKANAAPIIVAYHFNSDLARLQK----------AFPQGRTLDKDPCTIQEWN 105 + + I+ I++ ++ L +K T+ K + ++N Sbjct: 490 LDCMLASIKTNTTDKIVLVSNYTQTLDLFEKLCRKRGYGYVRLDGTMTIKKRGKVVDQFN 549 Query: 106 EGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKR 163 + + + G GLNL G N LV F W+ +Q + R+ + G K+ Sbjct: 550 QPDSADFIFMLSSKAGGCGLNL-IGANRLVMFDPDWNPANDEQAMARVW-----RDGQKK 603 Query: 164 AVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIH 204 F+Y L+A TI+E + QR K + +++ + H Sbjct: 604 PCFIYRLLATGTIEEKIFQRQTHKKALSTTVVDNAEDGERH 644 >gi|145342259|ref|XP_001416174.1| Swr1-Pie_related helicase [Ostreococcus lucimarinus CCE9901] gi|144576399|gb|ABO94467.1| Swr1-Pie_related helicase [Ostreococcus lucimarinus CCE9901] Length = 1053 Score = 107 bits (268), Expect = 9e-22, Method: Composition-based stats. Identities = 34/185 (18%), Positives = 71/185 (38%), Gaps = 19/185 (10%) Query: 25 SASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLA 82 + + + +K + K++ L ++ K + ++ L Sbjct: 782 ALGLMAPIRKFVARQSMFVPDKRLVQFDCGKLQILATLLRKLKQDGHKALIFTQMTKMLD 841 Query: 83 RLQ---------KAFPQGRT-LDKDPCTIQEWNEGK-IPLLFAHPASCGHGLNLQYGGNI 131 L+ G T ++ +Q +N K + + S G G+NL G + Sbjct: 842 VLEAFLNLHGYTYCRLDGSTGAEQRQLLMQRFNSDKRLFVFILSTRSGGFGINLT-GADT 900 Query: 132 LVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQ 191 ++F+ W+ QQ +R + G R V +Y LI++ TI+E +LQ+ K + Sbjct: 901 VIFYDSDWNPAMDQQAQDRC-----HRIGQTREVHIYRLISEGTIEESILQKAVQKRELD 955 Query: 192 DLLLN 196 ++ + Sbjct: 956 NMAIQ 960 >gi|325116597|emb|CBZ52150.1| putative SNF2 family N-terminal domain-containing protein [Neospora caninum Liverpool] Length = 2973 Score = 107 bits (268), Expect = 9e-22, Method: Composition-based stats. Identities = 30/166 (18%), Positives = 70/166 (42%), Gaps = 19/166 (11%) Query: 44 EEKHWKEVHDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQK----------AFPQG 91 K + K+ L ++ +A+ ++ F+ L L+ Sbjct: 2589 PHKQTLQDDCGKLIILAELLTKLRADGHRCLLFTQFSKMLDVLESWINHQGFTYVRLDGS 2648 Query: 92 RTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 +D+ + +N +I L + + G GLNL G + ++F+ W+ +Q ++R Sbjct: 2649 TKVDQRQRVVTRFNASPRIFLFISSTRAGGVGLNLT-GADTVIFYDTDWNPAMDRQAMDR 2707 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + G R V VY L+ +++I+E + ++ K + +++++ Sbjct: 2708 C-----HRIGQTRDVHVYRLVTEHSIEENIWRKQLQKRLLDEVVVD 2748 >gi|290982366|ref|XP_002673901.1| predicted protein [Naegleria gruberi] gi|284087488|gb|EFC41157.1| predicted protein [Naegleria gruberi] Length = 873 Score = 107 bits (267), Expect = 9e-22, Method: Composition-based stats. Identities = 36/175 (20%), Positives = 74/175 (42%), Gaps = 22/175 (12%) Query: 43 DEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQK----------AFPQ 90 +++K + + K+ L+ ++ + +++ +F S L ++K Sbjct: 592 NDKKEYHSQYSGKLLVLDNLLREIREVGDRVVIVSNFKSILNEIEKLCKIRDYPLSRLDG 651 Query: 91 GRTLDKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMI 148 +K + +N K + + G GLNL G N L+ W+ +Q + Sbjct: 652 STQSEKRMVIVNSFNSPKSNDFIFLLSSKAGGCGLNL-IGANRLIMIDPDWNPSNDEQAM 710 Query: 149 ERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN--ALKKE 201 R+ + G K++VF+Y +I TI+E + QR K+ + L+ +LK + Sbjct: 711 ARVW-----RDGQKKSVFIYRMIGCGTIEEKIFQRQIVKTGLSKSTLDEKSLKSQ 760 >gi|212531233|ref|XP_002145773.1| SWI/SNF family DNA-dependent ATPase Ris1, putative [Penicillium marneffei ATCC 18224] gi|210071137|gb|EEA25226.1| SWI/SNF family DNA-dependent ATPase Ris1, putative [Penicillium marneffei ATCC 18224] Length = 1177 Score = 107 bits (267), Expect = 9e-22, Method: Composition-based stats. Identities = 32/167 (19%), Positives = 68/167 (40%), Gaps = 23/167 (13%) Query: 45 EKHWKEVHDEKIKA----LEVIIEKANAAPIIVAYHFNSDLARL-----QKAFPQGR--- 92 EK W + KI+ LE I E I+ F S L L ++ + R Sbjct: 997 EKKW--ITSAKIEKAIEILEGIKESGKGEKTIIFSQFTSLLDMLEVPINRRGWKYRRYDG 1054 Query: 93 ---TLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIE 149 +++ ++ ++ ++ + GLNL + ++ F +W+ +Q I+ Sbjct: 1055 SMNPRERNESVLEFTDKPDCDIMLVSLKAGNAGLNL-VAASQVIIFDPFWNPYIEEQAID 1113 Query: 150 RIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 R + G R V V+ ++ + T+++ +L+ K + + L+ Sbjct: 1114 R-----AHRLGQTRPVQVHRILVEKTVEDRILELQDKKREVIEGALD 1155 >gi|326925324|ref|XP_003208867.1| PREDICTED: DNA repair and recombination protein RAD54-like [Meleagris gallopavo] Length = 792 Score = 107 bits (267), Expect = 9e-22, Method: Composition-based stats. Identities = 45/233 (19%), Positives = 85/233 (36%), Gaps = 47/233 (20%) Query: 3 QYHKFQREL--YCDLQGENIEAFNSASKTVKCLQLANG-AVYYD---------------- 43 Y F ++ +L+ I +S S +L N A+ YD Sbjct: 471 LYKNFLKQAKPVEELKEGKIN-VSSLSSITSLKKLCNHPALIYDKCVEEEEGFMGALDLF 529 Query: 44 ----EEKHWKEVHDEKIKALEVII----EKANAAPIIVAYHFNSDLARLQK--------- 86 K + K+ L+ I+ +N ++V ++ L +K Sbjct: 530 PAGYSTKSVEPQLSGKMLVLDYILAVTKSTSNDKVVLV-SNYTQTLDLFEKLCRNRRYLY 588 Query: 87 -AFPQGRTLDKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEE 143 ++ K ++ +N P + + G GLNL G N LV F W+ Sbjct: 589 VRLDGTMSIKKRAKVVERFNSPSSPEFIFMLSSKAGGCGLNL-IGANRLVMFDPDWNPAN 647 Query: 144 HQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 +Q + R+ + G K+ ++Y L++ TI+E + QR K + +++ Sbjct: 648 DEQAMARVW-----RDGQKKTCYIYRLLSTGTIEEKIFQRQTHKKALSSCVVD 695 >gi|118094595|ref|XP_422447.2| PREDICTED: similar to putative recombination factor GdRad54 [Gallus gallus] Length = 804 Score = 107 bits (267), Expect = 9e-22, Method: Composition-based stats. Identities = 45/233 (19%), Positives = 85/233 (36%), Gaps = 47/233 (20%) Query: 3 QYHKFQREL--YCDLQGENIEAFNSASKTVKCLQLANG-AVYYD---------------- 43 Y F ++ +L+ I +S S +L N A+ YD Sbjct: 483 LYKNFLKQAKPVEELKEGKIN-VSSLSSITSLKKLCNHPALIYDKCVEEEEGFMGALDLF 541 Query: 44 ----EEKHWKEVHDEKIKALEVII----EKANAAPIIVAYHFNSDLARLQK--------- 86 K + K+ L+ I+ +N ++V ++ L +K Sbjct: 542 PAGYSTKSVEPQLSGKMLVLDYILAVTKSTSNDKVVLV-SNYTQTLDLFEKLCRNRRYLY 600 Query: 87 -AFPQGRTLDKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEE 143 ++ K ++ +N P + + G GLNL G N LV F W+ Sbjct: 601 VRLDGTMSIKKRAKVVERFNSPSSPEFIFMLSSKAGGCGLNL-IGANRLVMFDPDWNPAN 659 Query: 144 HQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 +Q + R+ + G K+ ++Y L++ TI+E + QR K + +++ Sbjct: 660 DEQAMARVW-----RDGQKKTCYIYRLLSTGTIEEKIFQRQTHKKALSSCVVD 707 >gi|51316190|sp|O12944|RAD54_CHICK RecName: Full=DNA repair and recombination protein RAD54-like; AltName: Full=Putative recombination factor GdRad54; AltName: Full=RAD54 homolog gi|1905887|gb|AAB54115.1| putative recombination factor GdRad54 [Gallus gallus] Length = 733 Score = 107 bits (267), Expect = 9e-22, Method: Composition-based stats. Identities = 45/233 (19%), Positives = 85/233 (36%), Gaps = 47/233 (20%) Query: 3 QYHKFQREL--YCDLQGENIEAFNSASKTVKCLQLANG-AVYYD---------------- 43 Y F ++ +L+ I +S S +L N A+ YD Sbjct: 412 LYKNFLKQAKPVEELKEGKIN-VSSLSSITSLKKLCNHPALIYDKCVEEEEGFMGALDLF 470 Query: 44 ----EEKHWKEVHDEKIKALEVII----EKANAAPIIVAYHFNSDLARLQK--------- 86 K + K+ L+ I+ +N ++V ++ L +K Sbjct: 471 PAGYSTKSVEPQLSGKMLVLDYILAVTKSTSNDKVVLV-SNYTQTLDLFEKLCRNRRYLY 529 Query: 87 -AFPQGRTLDKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEE 143 ++ K ++ +N P + + G GLNL G N LV F W+ Sbjct: 530 VRLDGTMSIKKRAKVVERFNSPSSPEFIFMLSSKAGGCGLNL-IGANRLVMFDPDWNPAN 588 Query: 144 HQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 +Q + R+ + G K+ ++Y L++ TI+E + QR K + +++ Sbjct: 589 DEQAMARVW-----RDGQKKTCYIYRLLSTGTIEEKIFQRQTHKKALSSCVVD 636 >gi|312383263|gb|EFR28419.1| hypothetical protein AND_03670 [Anopheles darlingi] Length = 814 Score = 107 bits (267), Expect = 1e-21, Method: Composition-based stats. Identities = 33/151 (21%), Positives = 59/151 (39%), Gaps = 19/151 (12%) Query: 58 ALEVIIEKANAAPIIVAYHFNSDLARLQK----------AFPQGRTLDKDPCTIQEWNEG 107 L I N ++V ++ L +K T+ K + ++N Sbjct: 519 MLASIKTNTNDKIVLV-SNYTQTLDLFEKLCRKRGYGYVRLDGTMTIKKRGKVVDQFNSP 577 Query: 108 KIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 + + G GLNL G N LV F W+ +Q + R+ + G K+ Sbjct: 578 DSSDFIFMLSSKAGGCGLNL-IGANRLVMFDPDWNPANDEQAMARVW-----RDGQKKPC 631 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 F+Y L+A +I+E + QR K + +++ Sbjct: 632 FIYRLLATGSIEEKIFQRQTHKKALSTTVVD 662 >gi|156040810|ref|XP_001587391.1| hypothetical protein SS1G_11383 [Sclerotinia sclerotiorum 1980] gi|154695767|gb|EDN95505.1| hypothetical protein SS1G_11383 [Sclerotinia sclerotiorum 1980 UF-70] Length = 1301 Score = 107 bits (267), Expect = 1e-21, Method: Composition-based stats. Identities = 27/169 (15%), Positives = 68/169 (40%), Gaps = 23/169 (13%) Query: 46 KHWKEVHDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQ----------KAFPQGRT 93 K+W+ K+ ++E + I+ F + L LQ + + Sbjct: 1125 KNWQ--SSAKVDKCVELLERFQTEGEKTIIFSQFVTFLDLLQVPIGEKGWKCERYDGSIN 1182 Query: 94 LDKDPCTIQEW-NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIG 152 + I+++ N+ ++ + GLNL + ++ +W+ Q ++R Sbjct: 1183 AKRRDDAIKQFTNKPDCNIMLISLKAGNAGLNL-VAASRVIILDPFWNPFIEMQAVDR-- 1239 Query: 153 VTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN--ALK 199 + G + V V+ ++ Q+T+++ ++ + K + + L+ A+K Sbjct: 1240 ---AHRIGQMKPVQVHRILIQDTVEDRIMALQKQKKELVESALDEGAMK 1285 >gi|74008375|ref|XP_865514.1| PREDICTED: similar to SWI/SNF-related matrix-associated actin-dependent regulator of chromatin a1 isoform a isoform 15 [Canis familiaris] Length = 1040 Score = 107 bits (267), Expect = 1e-21, Method: Composition-based stats. Identities = 44/230 (19%), Positives = 90/230 (39%), Gaps = 40/230 (17%) Query: 1 MKQY---HKFQRELYCDLQGENIEAFNSASKTVK------CLQL---ANGAVYYD----- 43 +K Y K QRE Y + ++I+ NSA K K +QL N +D Sbjct: 413 IKVYLGLSKMQREWYTKILMKDIDVLNSAGKMDKMRLLNILMQLRKCCNHPYLFDGAEPG 472 Query: 44 ---EEKHWKEVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQ---------KAFP 89 + K+ L+ ++ K + +++ L L+ Sbjct: 473 PPYTTDEHIVSNSGKMVVLDKLLAKLKEQGSRVLIFSQMTRLLDILEDYCMWRGYEYCRL 532 Query: 90 QGRTL-DKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 G+T ++ I+ +N + + G G+NL ++++ + W+ + Q Sbjct: 533 DGQTPHEEREEAIEAFNAPNSSKFIFMLSTRAGGLGINL-ASADVVILYDSDWNPQVDLQ 591 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 ++R + G K+ V V+ LI NT++E +++R K + +++ Sbjct: 592 AMDR-----AHRIGQKKPVRVFRLITDNTVEERIVERAEIKLRLDSIVIQ 636 >gi|75764646|ref|ZP_00744080.1| SWF/SNF family helicase [Bacillus thuringiensis serovar israelensis ATCC 35646] gi|74487868|gb|EAO51650.1| SWF/SNF family helicase [Bacillus thuringiensis serovar israelensis ATCC 35646] Length = 340 Score = 107 bits (267), Expect = 1e-21, Method: Composition-based stats. Identities = 44/196 (22%), Positives = 83/196 (42%), Gaps = 20/196 (10%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEV 61 K Y++F++ ++ E + A+K + QLA ++ K++ ++ Sbjct: 156 KMYNEFKKHHIIEIGEELLIGDTPAAKKLYLRQLAGS------------YNEHKLQYIKD 203 Query: 62 IIEKANAAPIIVAYHFNSDLARLQKAFPQG-RTLDKDPCTIQEWNEGKIPLLFAHPASCG 120 +IE N II+ Y+F + L + T++ D + + + + + Sbjct: 204 LIESTNDR-IIIFYNFKKEYMALVDLIERPIATINGDIKDLSAYEKHDNSVTLIQYQAGA 262 Query: 121 HGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELV 180 GLNLQ N +V+F+L E +Q +R + G KR F YYL+ +I+ + Sbjct: 263 MGLNLQK-ANKIVYFTLTDKSELFEQSKKRTL-----RIGQKRLGFYYYLLTDGSIEWRM 316 Query: 181 LQRLRTKSTIQDLLLN 196 L L+ + D L Sbjct: 317 LDVLKERRDYTDALFE 332 >gi|119357048|ref|YP_911692.1| SNF2-related protein [Chlorobium phaeobacteroides DSM 266] gi|119354397|gb|ABL65268.1| SNF2-related protein [Chlorobium phaeobacteroides DSM 266] Length = 1007 Score = 107 bits (267), Expect = 1e-21, Method: Composition-based stats. Identities = 46/223 (20%), Positives = 78/223 (34%), Gaps = 34/223 (15%) Query: 1 MKQYHKFQRE-------LYCDLQGENIEAFNS------ASKTVKCLQLANGAVYYDEEKH 47 MKQY RE + +LQ + A + VK Q+ N V + + Sbjct: 763 MKQYCTLTREQASLYKAVIDELQEKIETAEGIDRRGLVLALLVKLKQVCNHPVQFLGDNS 822 Query: 48 WKEVHDEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQKA----------FPQGRT-L 94 E K++ L ++ + +V F LQ+ F G Sbjct: 823 SVEHRSGKLQRLTELLSEIRECGQRTLVFTQFMEMGKILQRYLQELFGEEVFFLHGSLSR 882 Query: 95 DKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIG 152 K I + +G+ + + G LNL N +V + WW+ Q +R Sbjct: 883 KKRDAMIDAFQQGEHAPHIFILSLKAGGSCLNLTN-ANHVVHYDRWWNPAVENQATDR-- 939 Query: 153 VTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 + G KR V V+ I T++E + + + K + +L Sbjct: 940 ---AFRIGQKRNVEVHKFITAGTLEERIDEMIDKKRAVSGSVL 979 >gi|238878261|gb|EEQ41899.1| DNA repair and recombination protein RAD54 [Candida albicans WO-1] Length = 848 Score = 107 bits (267), Expect = 1e-21, Method: Composition-based stats. Identities = 35/167 (20%), Positives = 69/167 (41%), Gaps = 21/167 (12%) Query: 45 EKHWKEVHDEKIKALEVIIEKANAA---PIIVAYHFNSDLARLQK--AFPQGRTL----- 94 + + K LE ++K N I++ ++ L ++K + + L Sbjct: 596 NREIQTWFSGKFLILERFLQKINKETDDKIVLISNYTQTLDLIEKMCRYKKYGVLRLDGT 655 Query: 95 ---DKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIE 149 +K + ++N+ P + + G G+NL G N LV W+ QQ + Sbjct: 656 MNINKRQKLVDKFNDPNGPEFIFLLSSKAGGCGINL-IGANRLVLMDPDWNPASDQQALA 714 Query: 150 RIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 R+ + G K+ F+Y I+ TI+E + QR K ++ +++ Sbjct: 715 RVW-----RDGQKKDCFIYRFISTGTIEEKIFQRQSMKMSLSSCVVD 756 >gi|68467321|ref|XP_722322.1| hypothetical protein CaO19.12471 [Candida albicans SC5314] gi|68467550|ref|XP_722208.1| hypothetical protein CaO19.5004 [Candida albicans SC5314] gi|46444164|gb|EAL03441.1| hypothetical protein CaO19.5004 [Candida albicans SC5314] gi|46444289|gb|EAL03565.1| hypothetical protein CaO19.12471 [Candida albicans SC5314] Length = 848 Score = 107 bits (267), Expect = 1e-21, Method: Composition-based stats. Identities = 35/167 (20%), Positives = 69/167 (41%), Gaps = 21/167 (12%) Query: 45 EKHWKEVHDEKIKALEVIIEKANAA---PIIVAYHFNSDLARLQK--AFPQGRTL----- 94 + + K LE ++K N I++ ++ L ++K + + L Sbjct: 596 NREIQTWFSGKFLILERFLQKINKETDDKIVLISNYTQTLDLIEKMCRYKKYGVLRLDGT 655 Query: 95 ---DKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIE 149 +K + ++N+ P + + G G+NL G N LV W+ QQ + Sbjct: 656 MNINKRQKLVDKFNDPNGPEFIFLLSSKAGGCGINL-IGANRLVLMDPDWNPASDQQALA 714 Query: 150 RIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 R+ + G K+ F+Y I+ TI+E + QR K ++ +++ Sbjct: 715 RVW-----RDGQKKDCFIYRFISTGTIEEKIFQRQSMKMSLSSCVVD 756 >gi|331238296|ref|XP_003331803.1| chromodomain helicase hrp1 [Puccinia graminis f. sp. tritici CRL 75-36-700-3] gi|309310793|gb|EFP87384.1| chromodomain helicase hrp1 [Puccinia graminis f. sp. tritici CRL 75-36-700-3] Length = 1611 Score = 107 bits (267), Expect = 1e-21, Method: Composition-based stats. Identities = 31/171 (18%), Positives = 67/171 (39%), Gaps = 20/171 (11%) Query: 49 KEVHDEKIKALEVIIEK--ANAAPIIVAYH----------FNSDLARLQKAFPQGRTLDK 96 V+ K+ L+ ++ + A +++ + S + + ++ Sbjct: 648 VVVNSGKMILLDKLLTRLKAEGHRVLIFSQMVRMLDIMSDYMSYRGYIFQRLDGTVPSEE 707 Query: 97 DPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 I +N P + G G+NL + ++ F W+ + Q + R Sbjct: 708 RRKAIGHFNAPGSPDFAFLLSTRAGGLGINL-ETADTVIIFDSDWNPQNDLQAMAR---- 762 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIHV 205 + G K V VY L+ ++T++E VL+R + K ++ ++N + HV Sbjct: 763 -AHRIGQKNHVNVYRLVTKDTVEEDVLERAKRKMILEYAIINQMDTSGKHV 812 >gi|115921268|ref|XP_787494.2| PREDICTED: similar to MGC81308 protein, partial [Strongylocentrotus purpuratus] gi|115974812|ref|XP_001181201.1| PREDICTED: similar to MGC81308 protein, partial [Strongylocentrotus purpuratus] Length = 629 Score = 107 bits (267), Expect = 1e-21, Method: Composition-based stats. Identities = 35/170 (20%), Positives = 68/170 (40%), Gaps = 23/170 (13%) Query: 45 EKHWKEVHDEKIKALEVIIEKANAAP-----IIVAYHFNSDLARLQK----------AFP 89 E H K+ L ++ +A P +++ ++ L LQ Sbjct: 403 EGRPLLAHCGKLCVLSEMLRAMHADPTRRERLVLVSNYTQTLDILQALCSIEGYQFCRLD 462 Query: 90 QGRTLDKDPCTIQEWNE--GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQM 147 K ++ +N K + + G GLNL G + L+ + + W+ Q Sbjct: 463 GSTPTAKRQSIVEHFNSSYAKETIFLLSSKAGGVGLNL-IGASRLLLYDIDWNPANDLQA 521 Query: 148 IERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + R+ + G K+ V++Y LI TI+E + QR +K ++ +++A Sbjct: 522 MARVW-----RDGQKKTVYIYRLITAGTIEEKIYQRQISKQSLSGAVVDA 566 >gi|328863054|gb|EGG12154.1| hypothetical protein MELLADRAFT_76598 [Melampsora larici-populina 98AG31] Length = 823 Score = 107 bits (267), Expect = 1e-21, Method: Composition-based stats. Identities = 38/171 (22%), Positives = 67/171 (39%), Gaps = 19/171 (11%) Query: 38 GAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGR----- 92 G D + K+ LE I + +++ +F L ++K + R Sbjct: 569 GYTSKDSRAPARPELSGKMVVLERIRTQTTDKIVLI-SNFTQTLDVMEKMCRERRWGCLR 627 Query: 93 -----TLDKDPCTIQEWN--EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQ 145 + K + +N EGK + + G G+NL G N L+ F W+ Q Sbjct: 628 LDGTMQITKRQKLVDRFNNPEGKEFIFLLSSKAGGCGINL-IGANRLILFDPDWNPASDQ 686 Query: 146 QMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 Q + R+ + G K+ FVY I +++E V QR K + +++ Sbjct: 687 QALARVW-----RDGQKKECFVYRFILTGSVEEKVFQRQSQKMKLSASVVD 732 >gi|301766464|ref|XP_002918637.1| PREDICTED: probable global transcription activator SNF2L1-like isoform 2 [Ailuropoda melanoleuca] Length = 1042 Score = 107 bits (267), Expect = 1e-21, Method: Composition-based stats. Identities = 44/230 (19%), Positives = 90/230 (39%), Gaps = 40/230 (17%) Query: 1 MKQY---HKFQRELYCDLQGENIEAFNSASKTVK------CLQL---ANGAVYYD----- 43 +K Y K QRE Y + ++I+ NSA K K +QL N +D Sbjct: 413 IKIYLGLSKMQREWYTKILMKDIDVLNSAGKMDKMRLLNILMQLRKCCNHPYLFDGAEPG 472 Query: 44 ---EEKHWKEVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQ---------KAFP 89 + K+ L+ ++ K + +++ L L+ Sbjct: 473 PPYTTDEHIVSNSGKMVVLDKLLAKLKEQGSRVLIFSQMTRLLDILEDYCMWRGYEYCRL 532 Query: 90 QGRTL-DKDPCTIQEWN--EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 G+T ++ I+ +N + + G G+NL ++++ + W+ + Q Sbjct: 533 DGQTPHEEREEAIEAFNVPNSNKFIFMLSTRAGGLGINL-ASADVVILYDSDWNPQVDLQ 591 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 ++R + G K+ V V+ LI NT++E +++R K + +++ Sbjct: 592 AMDR-----AHRIGQKKPVRVFRLITDNTVEERIVERAEIKLRLDSIVIQ 636 >gi|74008381|ref|XP_865569.1| PREDICTED: similar to SWI/SNF-related matrix-associated actin-dependent regulator of chromatin a1 isoform a isoform 18 [Canis familiaris] Length = 1048 Score = 107 bits (267), Expect = 1e-21, Method: Composition-based stats. Identities = 44/230 (19%), Positives = 90/230 (39%), Gaps = 40/230 (17%) Query: 1 MKQY---HKFQRELYCDLQGENIEAFNSASKTVK------CLQL---ANGAVYYD----- 43 +K Y K QRE Y + ++I+ NSA K K +QL N +D Sbjct: 413 IKVYLGLSKMQREWYTKILMKDIDVLNSAGKMDKMRLLNILMQLRKCCNHPYLFDGAEPG 472 Query: 44 ---EEKHWKEVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQ---------KAFP 89 + K+ L+ ++ K + +++ L L+ Sbjct: 473 PPYTTDEHIVSNSGKMVVLDKLLAKLKEQGSRVLIFSQMTRLLDILEDYCMWRGYEYCRL 532 Query: 90 QGRTL-DKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 G+T ++ I+ +N + + G G+NL ++++ + W+ + Q Sbjct: 533 DGQTPHEEREEAIEAFNAPNSSKFIFMLSTRAGGLGINL-ASADVVILYDSDWNPQVDLQ 591 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 ++R + G K+ V V+ LI NT++E +++R K + +++ Sbjct: 592 AMDR-----AHRIGQKKPVRVFRLITDNTVEERIVERAEIKLRLDSIVIQ 636 >gi|166362977|ref|YP_001655250.1| SNF2 helicase-like protein [Microcystis aeruginosa NIES-843] gi|166085350|dbj|BAG00058.1| SNF2 helicase homolog [Microcystis aeruginosa NIES-843] Length = 1020 Score = 107 bits (267), Expect = 1e-21, Method: Composition-based stats. Identities = 41/216 (18%), Positives = 80/216 (37%), Gaps = 28/216 (12%) Query: 2 KQYHKFQRELYCDLQGENIEAFN----SASKTVKCLQLANG-AVYYDEEKHWKEVHDEKI 56 + Y + ++ I+ + ++ Q+ N A + E K+ Sbjct: 782 QLYQQLVETTLQKIE--EIQGIQKHGLILTLLMQLKQICNHPAHFLKENSLETSQRSGKL 839 Query: 57 KALEVIIEK--ANAAPIIVAYHF--------NSDLARLQK--AFPQGRTLDKDP-CTIQE 103 LE ++E+ A ++ F +L + F G T KD I+ Sbjct: 840 LRLEAMVEEVIAEGDRALIFTQFAEWGKLLQTHLQKKLAEEILFLSGSTKAKDRVEMIER 899 Query: 104 W-NEGKIP-LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGF 161 + N+ + P + + G GLNL N + WW+ Q +R + G Sbjct: 900 FQNDPQGPKIFILSLKAGGTGLNLTR-ANHVFHIDRWWNPAVENQATDR-----AFRIGQ 953 Query: 162 KRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 KR V V+ I T++E + + + +K + + ++A Sbjct: 954 KRNVQVHKFICTGTLEERINEMIESKKQLAEQTVDA 989 >gi|227832859|ref|YP_002834566.1| DNA/RNA helicase [Corynebacterium aurimucosum ATCC 700975] gi|227453875|gb|ACP32628.1| DNA/RNA helicase [Corynebacterium aurimucosum ATCC 700975] Length = 1064 Score = 107 bits (267), Expect = 1e-21, Method: Composition-based stats. Identities = 33/188 (17%), Positives = 74/188 (39%), Gaps = 24/188 (12%) Query: 26 ASKTVKCLQLANGAVYYDEEKHWKEVH----DEKIKALEVIIEKA--NAAPIIVAYHFNS 79 + + Q+ N ++ + + K++ L II++A ++ ++ + + Sbjct: 857 LASLTRIKQICNHPAHFLADGSPVTIKGKHRSGKVEELMRIIDQAIESSERALIFTQYKA 916 Query: 80 DLARLQKAFPQ-----------GRTLDKDPCTIQEWNEGK-IPLLFAHPASCGHGLNLQY 127 LQ + G + ++ ++E+ P++ + G GLNL Sbjct: 917 FGDVLQPYLSEQLGCEIPFFHGGVSKNRRDQMVEEFQAEDGAPVMLLSLKAGGTGLNLT- 975 Query: 128 GGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTK 187 +I+V WW+ Q +R + G +R V VY +I T++E + L K Sbjct: 976 AASIVVHMDRWWNPAVENQATDR-----AFRIGQQRNVQVYKMITAGTLEESIQDILDGK 1030 Query: 188 STIQDLLL 195 + + ++ Sbjct: 1031 TQLAGAVV 1038 >gi|74008369|ref|XP_865464.1| PREDICTED: similar to SWI/SNF-related matrix-associated actin-dependent regulator of chromatin a1 isoform a isoform 12 [Canis familiaris] Length = 1040 Score = 107 bits (267), Expect = 1e-21, Method: Composition-based stats. Identities = 44/230 (19%), Positives = 90/230 (39%), Gaps = 40/230 (17%) Query: 1 MKQY---HKFQRELYCDLQGENIEAFNSASKTVK------CLQL---ANGAVYYD----- 43 +K Y K QRE Y + ++I+ NSA K K +QL N +D Sbjct: 413 IKVYLGLSKMQREWYTKILMKDIDVLNSAGKMDKMRLLNILMQLRKCCNHPYLFDGAEPG 472 Query: 44 ---EEKHWKEVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQ---------KAFP 89 + K+ L+ ++ K + +++ L L+ Sbjct: 473 PPYTTDEHIVSNSGKMVVLDKLLAKLKEQGSRVLIFSQMTRLLDILEDYCMWRGYEYCRL 532 Query: 90 QGRTL-DKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 G+T ++ I+ +N + + G G+NL ++++ + W+ + Q Sbjct: 533 DGQTPHEEREEAIEAFNAPNSSKFIFMLSTRAGGLGINL-ASADVVILYDSDWNPQVDLQ 591 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 ++R + G K+ V V+ LI NT++E +++R K + +++ Sbjct: 592 AMDR-----AHRIGQKKPVRVFRLITDNTVEERIVERAEIKLRLDSIVIQ 636 >gi|74008371|ref|XP_865480.1| PREDICTED: similar to SWI/SNF-related matrix-associated actin-dependent regulator of chromatin a1 isoform a isoform 13 [Canis familiaris] Length = 1062 Score = 107 bits (267), Expect = 1e-21, Method: Composition-based stats. Identities = 44/230 (19%), Positives = 90/230 (39%), Gaps = 40/230 (17%) Query: 1 MKQY---HKFQRELYCDLQGENIEAFNSASKTVK------CLQL---ANGAVYYD----- 43 +K Y K QRE Y + ++I+ NSA K K +QL N +D Sbjct: 413 IKVYLGLSKMQREWYTKILMKDIDVLNSAGKMDKMRLLNILMQLRKCCNHPYLFDGAEPG 472 Query: 44 ---EEKHWKEVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQ---------KAFP 89 + K+ L+ ++ K + +++ L L+ Sbjct: 473 PPYTTDEHIVSNSGKMVVLDKLLAKLKEQGSRVLIFSQMTRLLDILEDYCMWRGYEYCRL 532 Query: 90 QGRTL-DKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 G+T ++ I+ +N + + G G+NL ++++ + W+ + Q Sbjct: 533 DGQTPHEEREEAIEAFNAPNSSKFIFMLSTRAGGLGINL-ASADVVILYDSDWNPQVDLQ 591 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 ++R + G K+ V V+ LI NT++E +++R K + +++ Sbjct: 592 AMDR-----AHRIGQKKPVRVFRLITDNTVEERIVERAEIKLRLDSIVIQ 636 >gi|260434360|ref|ZP_05788330.1| superfamily II DNA/RNA helicase, SNF2 family [Synechococcus sp. WH 8109] gi|260412234|gb|EEX05530.1| superfamily II DNA/RNA helicase, SNF2 family [Synechococcus sp. WH 8109] Length = 1065 Score = 107 bits (267), Expect = 1e-21, Method: Composition-based stats. Identities = 30/188 (15%), Positives = 64/188 (34%), Gaps = 24/188 (12%) Query: 26 ASKTVKCLQLANGAVYYDEEKHWKEVH---DEKIKALEVIIEK--ANAAPIIVAYHFN-- 78 + + Q+ N E + K++ LE I+++ ++ F Sbjct: 860 LALLTRLKQICNHPALAMSEGAVDDGFLGRSAKLQRLEEILDEVIEAGDRALLFTQFAEW 919 Query: 79 -SDLAR-LQKAFP-------QGRTLDKDPCTIQEWNEG--KIPLLFAHPASCGHGLNLQY 127 L +Q+ + G + + + E L + G GLNL Sbjct: 920 GHLLQAWMQQRWKSEVPFLHGGTRKSERQAMVDRFQEDPRGPQLFLLSLKAGGVGLNLTR 979 Query: 128 GGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTK 187 + + WW+ Q +R + G V V+ I +++E + + +R K Sbjct: 980 ASH-VFHIDRWWNPAVENQATDR-----AYRIGQTNRVMVHKFITSGSVEEKIDRMIREK 1033 Query: 188 STIQDLLL 195 S + + ++ Sbjct: 1034 SRLAEDVI 1041 >gi|19113394|ref|NP_596602.1| ATP-dependent DNA helicase (predicted) [Schizosaccharomyces pombe 972h-] gi|74676047|sp|O60177|YG42_SCHPO RecName: Full=Uncharacterized ATP-dependent helicase C23E6.02 gi|3116120|emb|CAA18870.1| ATP-dependent DNA helicase (predicted) [Schizosaccharomyces pombe] Length = 1040 Score = 107 bits (267), Expect = 1e-21, Method: Composition-based stats. Identities = 35/176 (19%), Positives = 71/176 (40%), Gaps = 21/176 (11%) Query: 33 LQLANGAVYYDEEKHWKEVH--DEKIKALEVIIEKANAAPIIVAYHFNSDLAR------- 83 Q+ G + + KHW ++ + A++ II+K I++ F S L Sbjct: 848 RQM--GMKIFTDPKHWTTSTKIEKALNAVKEIIKKQPTDKILIFSQFVSFLELFTVPFRQ 905 Query: 84 --LQKAFPQG--RTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWW 139 ++ G T +++ I + + +L + GLNL ++++ +W Sbjct: 906 EGIKYLMYTGGLSTAERNQALINFEVDPNVRVLLISLKAGNVGLNLTCANHVIIL-DPFW 964 Query: 140 DLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 + +Q ++R + G + V + ++ NTI+E VL K + D L Sbjct: 965 NPYIEEQAVDR-----AHRIGQDKPVNILRIVTNNTIEERVLALQDRKRELIDSAL 1015 >gi|298254459|ref|ZP_06978045.1| SNF2 family protein [Streptococcus pneumoniae str. Canada MDR_19A] Length = 146 Score = 107 bits (267), Expect = 1e-21, Method: Composition-based stats. Identities = 29/133 (21%), Positives = 55/133 (41%), Gaps = 16/133 (12%) Query: 80 DLARLQKAFPQ---------GRTLDKDPCTI-QEWNEGKIPLLFAHPASCGHGLNLQYGG 129 D ++++ P G T K+ + + +N+G+ + G GLNL G Sbjct: 2 DFEKIEQELPDLGLTSFKITGSTPAKERQDMTKAFNQGERDAFLISLKAGGVGLNLT-GA 60 Query: 130 NILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKST 189 + ++ LWW+ Q I R + G + V VY L+ + TI+E + + K Sbjct: 61 DTVILVDLWWNPAVEAQAIGR-----AHRMGQEETVEVYRLVTKGTIEEKIQELQEQKKH 115 Query: 190 IQDLLLNALKKET 202 + +L+ + Sbjct: 116 LVSQVLDGTESRG 128 >gi|195550742|ref|XP_002076092.1| GD12001 [Drosophila simulans] gi|194201741|gb|EDX15317.1| GD12001 [Drosophila simulans] Length = 783 Score = 107 bits (267), Expect = 1e-21, Method: Composition-based stats. Identities = 30/151 (19%), Positives = 64/151 (42%), Gaps = 19/151 (12%) Query: 58 ALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGR----------TLDKDPCTIQEWNEG 107 L I + N +++ ++ L ++ + + ++ K + +N+ Sbjct: 506 MLAAIRAEGNDKVVLI-SNYTQTLDLFEQLARKRKYGFVRLDGTMSIKKRSKVVDRFNDP 564 Query: 108 KIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 + L + G GLNL G N L F W+ +Q + R+ + G K+ Sbjct: 565 ESDSFLFMLSSKAGGCGLNL-IGANRLFMFDPDWNPANDEQAMARVW-----RDGQKKPC 618 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 ++Y L+A +I+E +LQR K ++ +++ Sbjct: 619 YIYRLVASGSIEEKILQRQTHKKSLSSTIID 649 >gi|195342153|ref|XP_002037666.1| GM18177 [Drosophila sechellia] gi|194132516|gb|EDW54084.1| GM18177 [Drosophila sechellia] Length = 717 Score = 107 bits (267), Expect = 1e-21, Method: Composition-based stats. Identities = 30/151 (19%), Positives = 64/151 (42%), Gaps = 19/151 (12%) Query: 58 ALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGR----------TLDKDPCTIQEWNEG 107 L I + N +++ ++ L ++ + + ++ K + +N+ Sbjct: 440 MLAAIRAEGNDKVVLI-SNYTQTLDLFEQLARKRKYGFVRLDGTMSIKKRSKVVDRFNDP 498 Query: 108 KIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 + L + G GLNL G N L F W+ +Q + R+ + G K+ Sbjct: 499 ESDSFLFMLSSKAGGCGLNL-IGANRLFMFDPDWNPANDEQAMARVW-----RDGQKKPC 552 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 ++Y L+A +I+E +LQR K ++ +++ Sbjct: 553 YIYRLVASGSIEEKILQRQTHKKSLSSTIID 583 >gi|170041242|ref|XP_001848380.1| DNA repair and recombination protein RAD54 [Culex quinquefasciatus] gi|167864826|gb|EDS28209.1| DNA repair and recombination protein RAD54 [Culex quinquefasciatus] Length = 787 Score = 107 bits (267), Expect = 1e-21, Method: Composition-based stats. Identities = 32/153 (20%), Positives = 62/153 (40%), Gaps = 18/153 (11%) Query: 56 IKALEVIIEKANAAPIIVAYHFNSDLARLQK----------AFPQGRTLDKDPCTIQEWN 105 + + I+ I++ ++ L +K T+ K + E+N Sbjct: 489 LDCMLASIKMNTNDKIVLVSNYTQTLDLFEKLCRKRGYGYVRLDGTMTIKKRGKVVDEFN 548 Query: 106 EGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKR 163 + + + G GLNL G N LV F W+ +Q + R+ + G K+ Sbjct: 549 KPDSKEFIFMLSSKAGGCGLNL-IGANRLVMFDPDWNPANDEQAMARVW-----RDGQKK 602 Query: 164 AVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 F+Y L+A +I+E + QR K + + +++ Sbjct: 603 PCFIYRLLATGSIEEKIFQRQTHKKALSNTVVD 635 >gi|3329473|gb|AAC26857.1| RAD54 DNA repair protein [Drosophila melanogaster] Length = 628 Score = 107 bits (267), Expect = 1e-21, Method: Composition-based stats. Identities = 30/151 (19%), Positives = 64/151 (42%), Gaps = 19/151 (12%) Query: 58 ALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGR----------TLDKDPCTIQEWNEG 107 L I + N +++ ++ L ++ + + ++ K + +N+ Sbjct: 351 MLAAIRAEGNDKVVLI-SNYTQTLDLFEQLARKRKYGFVRLDGTMSIKKRSKVVDRFNDP 409 Query: 108 KIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 + L + G GLNL G N L F W+ +Q + R+ + G K+ Sbjct: 410 ESDSFLFMLSSKAGGCGLNL-IGANRLFMFDPDWNPANDEQAMARVW-----RDGQKKPC 463 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 ++Y L+A +I+E +LQR K ++ +++ Sbjct: 464 YIYRLVASGSIEEKILQRQTHKKSLSSTIID 494 >gi|27819922|gb|AAL39744.2| LD35220p [Drosophila melanogaster] Length = 788 Score = 107 bits (267), Expect = 1e-21, Method: Composition-based stats. Identities = 30/151 (19%), Positives = 64/151 (42%), Gaps = 19/151 (12%) Query: 58 ALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGR----------TLDKDPCTIQEWNEG 107 L I + N +++ ++ L ++ + + ++ K + +N+ Sbjct: 511 MLAAIRAEGNDKVVLI-SNYTQTLDLFEQLARKRKYGFVRLDGTMSIKKRSKVVDRFNDP 569 Query: 108 KIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 + L + G GLNL G N L F W+ +Q + R+ + G K+ Sbjct: 570 ESDSFLFMLSSKAGGCGLNL-IGANRLFMFDPDWNPANDEQAMARVW-----RDGQKKPC 623 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 ++Y L+A +I+E +LQR K ++ +++ Sbjct: 624 YIYRLVASGSIEEKILQRQTHKKSLSSTIID 654 >gi|17136368|ref|NP_476661.1| okra [Drosophila melanogaster] gi|74960637|sp|O76460|RAD54_DROME RecName: Full=DNA repair and recombination protein RAD54-like; Short=DmRAD54; AltName: Full=Protein okra; AltName: Full=RAD54 DNA repair protein gi|3264618|gb|AAC24577.1| Rad54 homolog OKR [Drosophila melanogaster] gi|7295868|gb|AAF51168.1| okra [Drosophila melanogaster] gi|220947310|gb|ACL86198.1| okr-PA [synthetic construct] gi|220956782|gb|ACL90934.1| okr-PA [synthetic construct] Length = 784 Score = 107 bits (267), Expect = 1e-21, Method: Composition-based stats. Identities = 30/151 (19%), Positives = 64/151 (42%), Gaps = 19/151 (12%) Query: 58 ALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGR----------TLDKDPCTIQEWNEG 107 L I + N +++ ++ L ++ + + ++ K + +N+ Sbjct: 507 MLAAIRAEGNDKVVLI-SNYTQTLDLFEQLARKRKYGFVRLDGTMSIKKRSKVVDRFNDP 565 Query: 108 KIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 + L + G GLNL G N L F W+ +Q + R+ + G K+ Sbjct: 566 ESDSFLFMLSSKAGGCGLNL-IGANRLFMFDPDWNPANDEQAMARVW-----RDGQKKPC 619 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 ++Y L+A +I+E +LQR K ++ +++ Sbjct: 620 YIYRLVASGSIEEKILQRQTHKKSLSSTIID 650 >gi|1765914|emb|CAA71278.1| RAD54 [Drosophila melanogaster] Length = 784 Score = 107 bits (267), Expect = 1e-21, Method: Composition-based stats. Identities = 30/151 (19%), Positives = 64/151 (42%), Gaps = 19/151 (12%) Query: 58 ALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGR----------TLDKDPCTIQEWNEG 107 L I + N +++ ++ L ++ + + ++ K + +N+ Sbjct: 507 MLAAIRAEGNDKVVLI-SNYTQTLDLFEQLARKRKYGFVRLDGTMSIKKRSKVVDRFNDP 565 Query: 108 KIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 + L + G GLNL G N L F W+ +Q + R+ + G K+ Sbjct: 566 ESDSFLFMLSSKAGGCGLNL-IGANRLFMFDPDWNPANDEQAMARVW-----RDGQKKPC 619 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 ++Y L+A +I+E +LQR K ++ +++ Sbjct: 620 YIYRLVASGSIEEKILQRQTHKKSLSSTIID 650 >gi|242772478|ref|XP_002478043.1| SWI/SNF family DNA-dependent ATPase Ris1, putative [Talaromyces stipitatus ATCC 10500] gi|218721662|gb|EED21080.1| SWI/SNF family DNA-dependent ATPase Ris1, putative [Talaromyces stipitatus ATCC 10500] Length = 1146 Score = 106 bits (266), Expect = 1e-21, Method: Composition-based stats. Identities = 32/167 (19%), Positives = 69/167 (41%), Gaps = 23/167 (13%) Query: 45 EKHWKEVHDEKIKA----LEVIIEKANAAPIIVAYHFNSDLARL-----QKAFPQGR--- 92 EK+W + KI+ LE I + + I+ F S L L ++ + R Sbjct: 966 EKNW--MTSAKIEKAIEILEEIKDSGSGEKTIIFSQFTSLLDLLEVPINRRGWKYRRYDG 1023 Query: 93 ---TLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIE 149 D++ ++ + + ++ + GLNL + ++ F +W+ +Q I+ Sbjct: 1024 SMNPRDRNESVLEFTDNPECDIMLVSLKAGNAGLNL-VAASQVIIFDPFWNPYIEEQAID 1082 Query: 150 RIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 R + G R V V+ ++ + T+++ +L K + + L+ Sbjct: 1083 R-----AHRLGQTRPVQVHRVLVEKTVEDRILALQEEKREVIEGALD 1124 >gi|68536447|ref|YP_251152.1| putative DNA/RNA helicase [Corynebacterium jeikeium K411] gi|68264046|emb|CAI37534.1| putative DNA/RNA helicase [Corynebacterium jeikeium K411] Length = 1023 Score = 106 bits (266), Expect = 1e-21, Method: Composition-based stats. Identities = 40/216 (18%), Positives = 79/216 (36%), Gaps = 27/216 (12%) Query: 2 KQYHKFQRELY--CDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVH----DEK 55 Y F +++ L G A N VK Q+ N ++ + K Sbjct: 785 ALYETFIKDMEMRLQLPGGKRRA-NILGALVKIKQICNHPAHFAGDGSGILADGKHRSAK 843 Query: 56 IKALEVIIEKA--NAAPIIVAYHF----NSDLARLQKAFP-------QGRTLDKDPCTIQ 102 I+ + I ++A +++ F LQ F G + K ++ Sbjct: 844 IERIFEITDQALEQGKKVLMFTQFPTFGKMLAPELQSTFGVEVPVLHGGLSRAKRTQMVR 903 Query: 103 EWNEGK-IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGF 161 ++ P++ + G G+ L ++++ WW+ Q +R + G Sbjct: 904 DFQSADGPPIMILSVRAGGTGITLTE-ASVVIHIDRWWNPAVEDQATDR-----AYRIGQ 957 Query: 162 KRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 ++V VY L+ Q TIDE + + +K + ++ A Sbjct: 958 NKSVEVYKLVVQGTIDERIHDIIMSKRELAGDIVGA 993 >gi|322382215|ref|ZP_08056128.1| ATP-binding SNF2 helicase-like protein/protein kinase-like protein [Paenibacillus larvae subsp. larvae B-3650] gi|321153796|gb|EFX46164.1| ATP-binding SNF2 helicase-like protein/protein kinase-like protein [Paenibacillus larvae subsp. larvae B-3650] Length = 951 Score = 106 bits (266), Expect = 1e-21, Method: Composition-based stats. Identities = 33/191 (17%), Positives = 61/191 (31%), Gaps = 27/191 (14%) Query: 26 ASKTVKCLQLANGA--VYYDEEKHWKEVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDL 81 + K Q+ N V + E K+ L ++ + ++ F Sbjct: 742 LAALTKLKQICNHPALVLKERPGGPWEQRSGKLDRLVEMVHELRDEGDKCLIFTQFVDTG 801 Query: 82 ARLQKAFPQ-----------GRTLDKDPCTIQEWNEGKIP------LLFAHPASCGHGLN 124 LQ Q G + I + + +P + + G GLN Sbjct: 802 FLLQHVLEQELGHPVLFLHGGSSKADRDKMIARFQDLTLPEDEQRYVFLLSLKAGGTGLN 861 Query: 125 LQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRL 184 L N + F WW+ Q +R + G R V V+ I T++E + + + Sbjct: 862 LT-AANHVFHFDRWWNPAVENQATDR-----AYRIGQTRNVQVHKFITLGTLEERIDEMI 915 Query: 185 RTKSTIQDLLL 195 K + ++ Sbjct: 916 EQKLGLSQQIV 926 >gi|167464191|ref|ZP_02329280.1| SWF/SNF family helicase [Paenibacillus larvae subsp. larvae BRL-230010] Length = 948 Score = 106 bits (266), Expect = 1e-21, Method: Composition-based stats. Identities = 33/191 (17%), Positives = 61/191 (31%), Gaps = 27/191 (14%) Query: 26 ASKTVKCLQLANGA--VYYDEEKHWKEVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDL 81 + K Q+ N V + E K+ L ++ + ++ F Sbjct: 739 LAALTKLKQICNHPALVLKERPGGPWEQRSGKLDRLVEMVHELRDEGDKCLIFTQFVDTG 798 Query: 82 ARLQKAFPQ-----------GRTLDKDPCTIQEWNEGKIP------LLFAHPASCGHGLN 124 LQ Q G + I + + +P + + G GLN Sbjct: 799 FLLQHVLEQELGHPVLFLHGGSSKADRDKMIARFQDLTLPEDEQRYVFLLSLKAGGTGLN 858 Query: 125 LQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRL 184 L N + F WW+ Q +R + G R V V+ I T++E + + + Sbjct: 859 LT-AANHVFHFDRWWNPAVENQATDR-----AYRIGQTRNVQVHKFITLGTLEERIDEMI 912 Query: 185 RTKSTIQDLLL 195 K + ++ Sbjct: 913 EQKLGLSQQIV 923 >gi|74008377|ref|XP_865534.1| PREDICTED: similar to SWI/SNF-related matrix-associated actin-dependent regulator of chromatin a1 isoform a isoform 16 [Canis familiaris] Length = 1052 Score = 106 bits (266), Expect = 1e-21, Method: Composition-based stats. Identities = 44/230 (19%), Positives = 90/230 (39%), Gaps = 40/230 (17%) Query: 1 MKQY---HKFQRELYCDLQGENIEAFNSASKTVK------CLQL---ANGAVYYD----- 43 +K Y K QRE Y + ++I+ NSA K K +QL N +D Sbjct: 413 IKVYLGLSKMQREWYTKILMKDIDVLNSAGKMDKMRLLNILMQLRKCCNHPYLFDGAEPG 472 Query: 44 ---EEKHWKEVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQ---------KAFP 89 + K+ L+ ++ K + +++ L L+ Sbjct: 473 PPYTTDEHIVSNSGKMVVLDKLLAKLKEQGSRVLIFSQMTRLLDILEDYCMWRGYEYCRL 532 Query: 90 QGRTL-DKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 G+T ++ I+ +N + + G G+NL ++++ + W+ + Q Sbjct: 533 DGQTPHEEREEAIEAFNAPNSSKFIFMLSTRAGGLGINL-ASADVVILYDSDWNPQVDLQ 591 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 ++R + G K+ V V+ LI NT++E +++R K + +++ Sbjct: 592 AMDR-----AHRIGQKKPVRVFRLITDNTVEERIVERAEIKLRLDSIVIQ 636 >gi|74008373|ref|XP_865495.1| PREDICTED: similar to SWI/SNF-related matrix-associated actin-dependent regulator of chromatin a1 isoform a isoform 14 [Canis familiaris] Length = 1063 Score = 106 bits (266), Expect = 1e-21, Method: Composition-based stats. Identities = 44/230 (19%), Positives = 90/230 (39%), Gaps = 40/230 (17%) Query: 1 MKQY---HKFQRELYCDLQGENIEAFNSASKTVK------CLQL---ANGAVYYD----- 43 +K Y K QRE Y + ++I+ NSA K K +QL N +D Sbjct: 413 IKVYLGLSKMQREWYTKILMKDIDVLNSAGKMDKMRLLNILMQLRKCCNHPYLFDGAEPG 472 Query: 44 ---EEKHWKEVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQ---------KAFP 89 + K+ L+ ++ K + +++ L L+ Sbjct: 473 PPYTTDEHIVSNSGKMVVLDKLLAKLKEQGSRVLIFSQMTRLLDILEDYCMWRGYEYCRL 532 Query: 90 QGRTL-DKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 G+T ++ I+ +N + + G G+NL ++++ + W+ + Q Sbjct: 533 DGQTPHEEREEAIEAFNAPNSSKFIFMLSTRAGGLGINL-ASADVVILYDSDWNPQVDLQ 591 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 ++R + G K+ V V+ LI NT++E +++R K + +++ Sbjct: 592 AMDR-----AHRIGQKKPVRVFRLITDNTVEERIVERAEIKLRLDSIVIQ 636 >gi|213963570|ref|ZP_03391823.1| Non-specific serine/threonine protein kinase [Capnocytophaga sputigena Capno] gi|213953850|gb|EEB65179.1| Non-specific serine/threonine protein kinase [Capnocytophaga sputigena Capno] Length = 951 Score = 106 bits (266), Expect = 1e-21, Method: Composition-based stats. Identities = 33/192 (17%), Positives = 74/192 (38%), Gaps = 22/192 (11%) Query: 18 ENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKAN--AAPIIVAY 75 E I FN+ K Q++N V D E + K + + +E + ++ Sbjct: 752 EPISEFNALQMLTKLRQISNHPVLADAEST---IPSGKYQEVISYMETLHTAQHKALIFS 808 Query: 76 HFNSDLA---------RLQKAFPQGRTL--DKDPCTIQEWNEGKIPLLFAHPASCGHGLN 124 F L +++ + G T ++ N+ + F + GLN Sbjct: 809 SFVKHLELFEAWCKTHKIKYSKLTGATATHERKSQVEAFQNQEDVSFFFISLKAGEVGLN 868 Query: 125 LQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRL 184 L + ++ WW+ +Q I R + G + V V +++++I+E +++ Sbjct: 869 LTK-ASYVLLLDPWWNPFSERQAIAR-----AHRIGQENKVNVIRFVSKDSIEEKIIKLQ 922 Query: 185 RTKSTIQDLLLN 196 K+ + + +++ Sbjct: 923 ENKTELFENVID 934 >gi|115657922|ref|XP_785657.2| PREDICTED: similar to Rad54b [Strongylocentrotus purpuratus] gi|115931907|ref|XP_001183532.1| PREDICTED: similar to Rad54b [Strongylocentrotus purpuratus] Length = 770 Score = 106 bits (266), Expect = 1e-21, Method: Composition-based stats. Identities = 35/171 (20%), Positives = 67/171 (39%), Gaps = 23/171 (13%) Query: 44 EEKHWKEVHDEKIKALEVIIEKANAAP-----IIVAYHFNSDLARLQK----------AF 88 E H K+ L ++ +A P +++ ++ L LQ Sbjct: 487 SEGRPLLAHCGKLCVLSEMLRAMHADPTRRERLVLVSNYTQTLDILQALCSIEGYQFCRL 546 Query: 89 PQGRTLDKDPCTIQEWNE--GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 K ++ +N K + + G GLNL G + L+ + + W+ Q Sbjct: 547 DGSTPTAKRQSIVEHFNSSYAKETIFLLSSKAGGVGLNL-IGASRLLLYDIDWNPANDLQ 605 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + R+ + G K+ V +Y LI TI+E + QR +K ++ +++A Sbjct: 606 AMARVW-----RDGQKKTVHIYRLITAGTIEEKIYQRQISKQSLSGAVVDA 651 >gi|156379220|ref|XP_001631356.1| predicted protein [Nematostella vectensis] gi|156218395|gb|EDO39293.1| predicted protein [Nematostella vectensis] Length = 836 Score = 106 bits (266), Expect = 1e-21, Method: Composition-based stats. Identities = 32/171 (18%), Positives = 66/171 (38%), Gaps = 20/171 (11%) Query: 43 DEEKHWKEVHDEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQK----------AFPQ 90 ++ K+ L ++E+ + +++ +++ L LQK Sbjct: 555 NDASELSIAQSGKLTVLNSMLEEIHCTGERVVLVSNYSQTLDILQKLCTVKKYRYLRLDG 614 Query: 91 GRTLDKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMI 148 K ++ +N + + G GLNL G + L+ + + W+ Q + Sbjct: 615 STPTAKRQSLVERFNAKHCQDFVFLLSSKAGGVGLNL-IGASRLILYDIDWNPANDLQAM 673 Query: 149 ERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 R+ + G +R V +Y L+ TI+E + QR TK + + + K Sbjct: 674 ARVW-----RDGQRRRVVIYRLLTTGTIEEKIYQRQTTKQGLSGAVADDRK 719 >gi|255721613|ref|XP_002545741.1| hypothetical protein CTRG_00522 [Candida tropicalis MYA-3404] gi|240136230|gb|EER35783.1| hypothetical protein CTRG_00522 [Candida tropicalis MYA-3404] Length = 1368 Score = 106 bits (266), Expect = 1e-21, Method: Composition-based stats. Identities = 31/155 (20%), Positives = 64/155 (41%), Gaps = 19/155 (12%) Query: 55 KIKALEVIIEKA--NAAPIIVAYHFNSDLARLQK----------AFPQGRTLDKDPCTIQ 102 K+ L+ ++ N I++ + + Q+ T++ + Sbjct: 1219 KLAKLDELLVDLKKNGHRILIYFQMTRMMEIFQEYLAFRNYKFMRLDGSTTIEARRELVT 1278 Query: 103 EWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGF 161 +W + + + G GLNL + ++F+ W+ Q ++R + G Sbjct: 1279 QWQTNPEFFIFMLSTRAGGLGLNLT-SADTVIFYDSDWNPTVDAQAMDR-----AHRIGQ 1332 Query: 162 KRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + V VY L+ +NTI+E + Q+ + K IQ L++N Sbjct: 1333 TKVVTVYRLLTKNTIEERIRQKAQNKEEIQKLVIN 1367 >gi|74008379|ref|XP_865551.1| PREDICTED: similar to SWI/SNF-related matrix-associated actin-dependent regulator of chromatin a1 isoform a isoform 17 [Canis familiaris] Length = 1063 Score = 106 bits (266), Expect = 1e-21, Method: Composition-based stats. Identities = 44/230 (19%), Positives = 90/230 (39%), Gaps = 40/230 (17%) Query: 1 MKQY---HKFQRELYCDLQGENIEAFNSASKTVK------CLQL---ANGAVYYD----- 43 +K Y K QRE Y + ++I+ NSA K K +QL N +D Sbjct: 413 IKVYLGLSKMQREWYTKILMKDIDVLNSAGKMDKMRLLNILMQLRKCCNHPYLFDGAEPG 472 Query: 44 ---EEKHWKEVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQ---------KAFP 89 + K+ L+ ++ K + +++ L L+ Sbjct: 473 PPYTTDEHIVSNSGKMVVLDKLLAKLKEQGSRVLIFSQMTRLLDILEDYCMWRGYEYCRL 532 Query: 90 QGRTL-DKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 G+T ++ I+ +N + + G G+NL ++++ + W+ + Q Sbjct: 533 DGQTPHEEREEAIEAFNAPNSSKFIFMLSTRAGGLGINL-ASADVVILYDSDWNPQVDLQ 591 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 ++R + G K+ V V+ LI NT++E +++R K + +++ Sbjct: 592 AMDR-----AHRIGQKKPVRVFRLITDNTVEERIVERAEIKLRLDSIVIQ 636 >gi|152964981|ref|YP_001360765.1| Non-specific serine/threonine protein kinase [Kineococcus radiotolerans SRS30216] gi|151359498|gb|ABS02501.1| Non-specific serine/threonine protein kinase [Kineococcus radiotolerans SRS30216] Length = 1029 Score = 106 bits (266), Expect = 1e-21, Method: Composition-based stats. Identities = 39/218 (17%), Positives = 74/218 (33%), Gaps = 30/218 (13%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSA------SKTVKCLQLANGAVYY--DEEKHWKEVH- 52 Y + +L L E+ + A + + Q+ N +Y D Sbjct: 790 ALYRQVVDDLVRRLAEEDPDPRGPARRGLVLATLTRLKQICNHPAHYLADASGVLHRGRH 849 Query: 53 -DEKIKALEVIIEKA--NAAPIIVAYHFN--------SDLARLQKAFP---QGRTLDKDP 98 K++ L+ I+ A ++ F R + P G Sbjct: 850 RSGKLELLDDIVTSARAEGEKVLCFTQFAEFGHLLGPHLAERTGEPVPFLHGGVPRRARD 909 Query: 99 CTIQEWNEGKIP-LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 + E++ P ++ + G GLNL N +V WW+ Q +R Sbjct: 910 AMVAEFSSADGPGVMLLSLRAGGTGLNLT-AANHVVHVDRWWNPAVEDQATDR-----AY 963 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 + G R+V V +++ T++E V + K + D ++ Sbjct: 964 RIGQHRSVQVRKMVSVGTVEERVDAVITRKRGLADAVV 1001 >gi|74008361|ref|XP_865393.1| PREDICTED: similar to SWI/SNF-related matrix-associated actin-dependent regulator of chromatin a1 isoform b isoform 8 [Canis familiaris] Length = 998 Score = 106 bits (266), Expect = 1e-21, Method: Composition-based stats. Identities = 44/230 (19%), Positives = 90/230 (39%), Gaps = 40/230 (17%) Query: 1 MKQY---HKFQRELYCDLQGENIEAFNSASKTVK------CLQL---ANGAVYYD----- 43 +K Y K QRE Y + ++I+ NSA K K +QL N +D Sbjct: 353 IKVYLGLSKMQREWYTKILMKDIDVLNSAGKMDKMRLLNILMQLRKCCNHPYLFDGAEPG 412 Query: 44 ---EEKHWKEVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQ---------KAFP 89 + K+ L+ ++ K + +++ L L+ Sbjct: 413 PPYTTDEHIVSNSGKMVVLDKLLAKLKEQGSRVLIFSQMTRLLDILEDYCMWRGYEYCRL 472 Query: 90 QGRTL-DKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 G+T ++ I+ +N + + G G+NL ++++ + W+ + Q Sbjct: 473 DGQTPHEEREEAIEAFNAPNSSKFIFMLSTRAGGLGINL-ASADVVILYDSDWNPQVDLQ 531 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 ++R + G K+ V V+ LI NT++E +++R K + +++ Sbjct: 532 AMDR-----AHRIGQKKPVRVFRLITDNTVEERIVERAEIKLRLDSIVIQ 576 >gi|190348945|gb|EDK41499.2| hypothetical protein PGUG_05597 [Meyerozyma guilliermondii ATCC 6260] Length = 814 Score = 106 bits (266), Expect = 1e-21, Method: Composition-based stats. Identities = 35/192 (18%), Positives = 76/192 (39%), Gaps = 29/192 (15%) Query: 28 KTVKCLQLANGA--VYYDE------EKHWKEVHDEKIKALEVI---IEKANAAPIIVAYH 76 + ++ + +G+ + D+ +K + + K LE I I++ + Sbjct: 538 ELLRLPEEVSGSEDILPDDYESSGRDKEIRTWYSGKFAMLERFLHQIRTETDDKIVLISN 597 Query: 77 FNSDLARLQK----------AFPQGRTLDKDPCTIQEWN--EGKIPLLFAHPASCGHGLN 124 + L +++ ++K + +N EG+ + + G G+N Sbjct: 598 YTQTLDLIERMCRYKRYQCCRLDGTMNINKRQKLVDRFNDPEGQEFIFLLSSKAGGCGIN 657 Query: 125 LQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRL 184 L G N L+ W+ QQ + R+ + G K+ F+Y I+ TI+E + QR Sbjct: 658 L-IGANRLILLDPDWNPAADQQALARVW-----RDGQKKDCFIYRFISTGTIEEKIFQRQ 711 Query: 185 RTKSTIQDLLLN 196 K ++ +++ Sbjct: 712 SMKLSLSSCVVD 723 >gi|187735422|ref|YP_001877534.1| Non-specific serine/threonine protein kinase [Akkermansia muciniphila ATCC BAA-835] gi|187425474|gb|ACD04753.1| Non-specific serine/threonine protein kinase [Akkermansia muciniphila ATCC BAA-835] Length = 895 Score = 106 bits (266), Expect = 1e-21, Method: Composition-based stats. Identities = 31/183 (16%), Positives = 60/183 (32%), Gaps = 20/183 (10%) Query: 29 TVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQK 86 + Q+ N + + K + L+ + A I+ F S + L Sbjct: 696 LARLKQICNHPAQFQGTDDYAPERSGKFRRLQELCASIAARQEKTILFTQFRSIIPHLHD 755 Query: 87 AFPQ-----------GRTLDKDPCTIQEWNEGKIPLLFA-HPASCGHGLNLQYGGNILVF 134 G + + + + + P + G GL L + ++ Sbjct: 756 LLSGVFGRSGLTLHGGTPIPERQNIVTAFQKESGPPFCILSLKAAGTGLTLTQASH-VIH 814 Query: 135 FSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 WW+ Q +R + G R V V+ LI + TI++ + L+ K + D L Sbjct: 815 VDRWWNPAVENQATDR-----AYRIGQHRNVLVHRLICRGTIEDRIDAMLKDKRRMADDL 869 Query: 195 LNA 197 + Sbjct: 870 FSG 872 >gi|227487933|ref|ZP_03918249.1| chromodomain helicase [Corynebacterium glucuronolyticum ATCC 51867] gi|227542574|ref|ZP_03972623.1| chromodomain helicase [Corynebacterium glucuronolyticum ATCC 51866] gi|227092139|gb|EEI27451.1| chromodomain helicase [Corynebacterium glucuronolyticum ATCC 51867] gi|227181772|gb|EEI62744.1| chromodomain helicase [Corynebacterium glucuronolyticum ATCC 51866] Length = 1039 Score = 106 bits (266), Expect = 1e-21, Method: Composition-based stats. Identities = 35/216 (16%), Positives = 74/216 (34%), Gaps = 28/216 (12%) Query: 2 KQYHKFQRELYCDLQGENIEAFN----SASKTVKCLQLANGAV--YYDEEKHWKEVH--D 53 Y + ++ LQ + + + + Q+ N D + Sbjct: 795 ALYKSYVDDVQRKLQEQKMGGIQYRGIVLASLTRIKQICNHPAHFLGDGSEMTHHGKHRS 854 Query: 54 EKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQKAFPQGRTLD------------KDPC 99 K++ L I++ A +++ + + LQ + +D + Sbjct: 855 GKVEKLMEIVDAALLRERRVLIFTQYTAFGTMLQHYLAERTGIDIPFLHGGVPQKMRTRM 914 Query: 100 TIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQA 159 +EG P+ + G GLNL +V WW+ Q +R + Sbjct: 915 VADFQSEGGPPIFILSLKAGGTGLNLT-AATEVVHMDRWWNPAVEDQATDR-----AYRI 968 Query: 160 GFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 G + V VY ++A T++E + + L K+ + ++ Sbjct: 969 GQESDVHVYKMVAAGTLEEKIQKVLEEKTALAGSVV 1004 >gi|254576997|ref|XP_002494485.1| ZYRO0A02618p [Zygosaccharomyces rouxii] gi|238937374|emb|CAR25552.1| ZYRO0A02618p [Zygosaccharomyces rouxii] Length = 1438 Score = 106 bits (266), Expect = 1e-21, Method: Composition-based stats. Identities = 25/158 (15%), Positives = 63/158 (39%), Gaps = 19/158 (12%) Query: 53 DEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQK----------AFPQGRTLDKDPCT 100 K++ L+ ++ N +++ + + +++ L+ Sbjct: 1265 SAKLRKLDELLVDLKRNGHRVLIYFQMTKMMDLMEEYLTYRQYKHIRLDGSSKLEDRRDL 1324 Query: 101 IQEWNE-GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQA 159 + +W + + + G G+NL + ++F+ W+ Q ++R + Sbjct: 1325 VHDWQTVPDLFVFLLSTRAGGLGINLT-AADTVIFYDSDWNPTIDSQAMDR-----AHRL 1378 Query: 160 GFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 G R V VY L+ ++TI+E + R + K +Q +++ Sbjct: 1379 GQTRQVTVYRLLVRDTIEERMRDRAKQKEHVQQVVMEG 1416 >gi|74008367|ref|XP_865444.1| PREDICTED: similar to SWI/SNF-related matrix-associated actin-dependent regulator of chromatin a1 isoform a isoform 11 [Canis familiaris] Length = 1068 Score = 106 bits (266), Expect = 1e-21, Method: Composition-based stats. Identities = 44/230 (19%), Positives = 90/230 (39%), Gaps = 40/230 (17%) Query: 1 MKQY---HKFQRELYCDLQGENIEAFNSASKTVK------CLQL---ANGAVYYD----- 43 +K Y K QRE Y + ++I+ NSA K K +QL N +D Sbjct: 413 IKVYLGLSKMQREWYTKILMKDIDVLNSAGKMDKMRLLNILMQLRKCCNHPYLFDGAEPG 472 Query: 44 ---EEKHWKEVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQ---------KAFP 89 + K+ L+ ++ K + +++ L L+ Sbjct: 473 PPYTTDEHIVSNSGKMVVLDKLLAKLKEQGSRVLIFSQMTRLLDILEDYCMWRGYEYCRL 532 Query: 90 QGRTL-DKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 G+T ++ I+ +N + + G G+NL ++++ + W+ + Q Sbjct: 533 DGQTPHEEREEAIEAFNAPNSSKFIFMLSTRAGGLGINL-ASADVVILYDSDWNPQVDLQ 591 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 ++R + G K+ V V+ LI NT++E +++R K + +++ Sbjct: 592 AMDR-----AHRIGQKKPVRVFRLITDNTVEERIVERAEIKLRLDSIVIQ 636 >gi|298715164|emb|CBJ34003.1| conserved unknown protein [Ectocarpus siliculosus] Length = 573 Score = 106 bits (266), Expect = 2e-21, Method: Composition-based stats. Identities = 31/161 (19%), Positives = 64/161 (39%), Gaps = 21/161 (13%) Query: 52 HDEKIKALEV----IIEKANAAPIIVAYHFNSDLARLQKAFPQGRT----------LDKD 97 K++AL ++E+ AA IV F + L ++ +G+ +DK Sbjct: 400 SSTKMEALMEEVHLMMERDPAAKAIVFSQFVNMLDLIEFRMHKGQVGCRKLSGHLSVDKR 459 Query: 98 PCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 +Q + + + +L + G LNL N + WW+ Q I+R Sbjct: 460 EEVLQAFQTDPGVKVLLISLKAGGVALNLTV-ANHIFLMDPWWNPAAEMQAIDR-----T 513 Query: 157 RQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + G + ++ I ++T++E +++ K + D + Sbjct: 514 HRLGQFKPIYATRFIIEDTVEERIIKLQEKKQLVFDSTVGG 554 >gi|210075893|ref|XP_503715.2| YALI0E09012p [Yarrowia lipolytica] gi|199426896|emb|CAG79304.2| YALI0E09012p [Yarrowia lipolytica] Length = 1457 Score = 106 bits (266), Expect = 2e-21, Method: Composition-based stats. Identities = 26/158 (16%), Positives = 64/158 (40%), Gaps = 19/158 (12%) Query: 53 DEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQK----------AFPQGRTLDKDPCT 100 K+ L+ ++ + A ++V + + ++ L Sbjct: 1245 SGKLAKLDELLAELKAGGHRVLVYFQMTKMMDLAEEYLTFKQYNYCRLDGSSKLSDRRDL 1304 Query: 101 IQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQA 159 + +W + ++ + + G G+NL + ++F+ W+ Q ++R + Sbjct: 1305 VNDWQTKPELFVFLLSTRAGGLGINLT-AADTVIFYDSDWNPTIDSQAMDR-----AHRL 1358 Query: 160 GFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 G R V VY L+ + TI+E + R + K +Q+++++ Sbjct: 1359 GQTRQVTVYRLLVKGTIEERMRDRAKQKEHVQNVVMSG 1396 >gi|316969354|gb|EFV53467.1| DNA repair protein Rhp54 [Trichinella spiralis] Length = 328 Score = 106 bits (266), Expect = 2e-21, Method: Composition-based stats. Identities = 29/157 (18%), Positives = 61/157 (38%), Gaps = 20/157 (12%) Query: 54 EKIKALEVIIEKANAAPIIVAYHFNSDLARLQK----------AFPQGRTLDKDPCTIQE 103 + L ++ +++ ++ L ++ T K + + Sbjct: 85 RVLDGLLAYVKANTDDKVVLVSNYTQTLDLFEQLCILRNYGFVRLDGSMTKKKRAKIVAD 144 Query: 104 WNEGKI----PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQA 159 +N+ ++ + + G GLNL G N LV F W+ Q + R+ + Sbjct: 145 FNDPQVGNSTFVFMLSSKAGGCGLNL-IGANRLVMFDPDWNPANDGQAMARVW-----RD 198 Query: 160 GFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 G K+ F+Y L+A +I+E + QR K + +++ Sbjct: 199 GQKKICFIYRLLATGSIEEKIFQRQTHKKALSSCVVD 235 >gi|169806094|ref|XP_001827792.1| SWF-SNF family helicase [Enterocytozoon bieneusi H348] gi|161779078|gb|EDQ31104.1| SWF-SNF family helicase [Enterocytozoon bieneusi H348] Length = 823 Score = 106 bits (266), Expect = 2e-21, Method: Composition-based stats. Identities = 30/157 (19%), Positives = 68/157 (43%), Gaps = 19/157 (12%) Query: 52 HDEKIKALEVIIEKANA--APIIVAYHFNSDLAR-----LQKAFPQGRT-----LDKDPC 99 + K+K L+ ++ + N +++ + + ++K + R + + Sbjct: 666 NSGKLKVLDDLLVQLNKGNHRVLIYFQMTRMMDLFEEFLIEKQYSYLRLDGTCKVSQRKE 725 Query: 100 TIQEW-NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQ 158 + W N + + + G GLNL + ++F+ W+ QQ ++R+ + Sbjct: 726 LVNLWQNTDRHFIFMLSTRAGGVGLNLT-AADTVIFYDSDWNPTVDQQAMDRV-----YR 779 Query: 159 AGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 G + V VY LI + TI+E +++ K +Q L++ Sbjct: 780 LGQTKDVTVYRLITKGTIEERIMEMAEKKGEMQKLVI 816 >gi|15239896|ref|NP_199166.1| SNF2 domain-containing protein / helicase domain-containing protein / RING finger domain-containing protein [Arabidopsis thaliana] gi|60390960|sp|Q9FIY7|SM3L3_ARATH RecName: Full=Putative SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 3-like 3; Short=SMARCA3-like protein 3 gi|10178192|dbj|BAB11616.1| DNA repair protein-like [Arabidopsis thaliana] gi|332007595|gb|AED94978.1| Helicase protein with RING/U-box domain [Arabidopsis thaliana] Length = 1277 Score = 106 bits (266), Expect = 2e-21, Method: Composition-based stats. Identities = 45/160 (28%), Positives = 67/160 (41%), Gaps = 19/160 (11%) Query: 42 YDEEKHWKEVH--DEKIKALEVIIEKANAAPIIVAYHFNSDLARL-----QKAFPQGRTL 94 D K+WKE E +K LE I + + IV + S L L ++ F R Sbjct: 1099 VDVVKNWKESSKVSELLKCLEKIKKSGSGEKSIVFSQWTSFLDLLEIPLRRRGFEFLRFD 1158 Query: 95 DK-----DPCTIQEWNEGKIP-LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMI 148 K ++E+NE K +L + G GLNL + + WW+ +Q I Sbjct: 1159 GKLAQKGREKVLKEFNETKQKTILLMSLKAGGVGLNLT-AASSVFLMDPWWNPAVEEQAI 1217 Query: 149 ERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKS 188 RI + G KR VFV I ++T++E + Q K Sbjct: 1218 MRI-----HRIGQKRTVFVRRFIVKDTVEERMQQVQARKQ 1252 >gi|262182653|ref|ZP_06042074.1| DNA/RNA helicase [Corynebacterium aurimucosum ATCC 700975] Length = 1023 Score = 106 bits (266), Expect = 2e-21, Method: Composition-based stats. Identities = 33/188 (17%), Positives = 74/188 (39%), Gaps = 24/188 (12%) Query: 26 ASKTVKCLQLANGAVYYDEEKHWKEVH----DEKIKALEVIIEKA--NAAPIIVAYHFNS 79 + + Q+ N ++ + + K++ L II++A ++ ++ + + Sbjct: 816 LASLTRIKQICNHPAHFLADGSPVTIKGKHRSGKVEELMRIIDQAIESSERALIFTQYKA 875 Query: 80 DLARLQKAFPQ-----------GRTLDKDPCTIQEWNEGK-IPLLFAHPASCGHGLNLQY 127 LQ + G + ++ ++E+ P++ + G GLNL Sbjct: 876 FGDVLQPYLSEQLGCEIPFFHGGVSKNRRDQMVEEFQAEDGAPVMLLSLKAGGTGLNLT- 934 Query: 128 GGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTK 187 +I+V WW+ Q +R + G +R V VY +I T++E + L K Sbjct: 935 AASIVVHMDRWWNPAVENQATDR-----AFRIGQQRNVQVYKMITAGTLEESIQDILDGK 989 Query: 188 STIQDLLL 195 + + ++ Sbjct: 990 TQLAGAVV 997 >gi|50302399|ref|XP_451134.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140] gi|49640265|emb|CAH02722.1| KLLA0A03069p [Kluyveromyces lactis] Length = 895 Score = 106 bits (265), Expect = 2e-21, Method: Composition-based stats. Identities = 32/165 (19%), Positives = 65/165 (39%), Gaps = 23/165 (13%) Query: 48 WKEVHDEKIKALE----VIIEKANAAPIIVAYHFNSDLARLQK----------AFPQGRT 93 + K L I ++N +++ ++ L ++K Sbjct: 647 IQTAFSSKFSVLARFLYKIKTESNDKIVLI-SNYTQTLDLIEKMCFSNHYGVLRLDGTMN 705 Query: 94 LDKDPCTIQEWN--EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERI 151 ++K + +N EG+ + + G G+NL G N L+ W+ QQ + R+ Sbjct: 706 INKRQKLVDRFNDPEGQEFIFLLSSKAGGCGINL-IGANRLILLDPDWNPAADQQALARV 764 Query: 152 GVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + G K+ F+Y I+ TI+E + QR K ++ +++ Sbjct: 765 W-----RDGQKKDCFIYRFISTGTIEEKIFQRQSMKMSLSSCVVD 804 >gi|254570653|ref|XP_002492436.1| DNA-dependent ATPase [Pichia pastoris GS115] gi|238032234|emb|CAY70235.1| DNA-dependent ATPase [Pichia pastoris GS115] gi|328353550|emb|CCA39948.1| DNA repair and recombination protein RAD54 and RAD54-like protein [Pichia pastoris CBS 7435] Length = 838 Score = 106 bits (265), Expect = 2e-21, Method: Composition-based stats. Identities = 34/168 (20%), Positives = 66/168 (39%), Gaps = 21/168 (12%) Query: 45 EKHWKEVHDEKIKALEVI---IEKANAAPIIVAYHFNSDLARLQK----------AFPQG 91 + + H K L+ I K I++ ++ L ++K Sbjct: 586 NREVQVWHSSKFLILQRFLYKINKETNDKIVIISNYTQTLDLIEKLCISSRYGSLRLDGT 645 Query: 92 RTLDKDPCTIQEWN--EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIE 149 ++K + ++N EGK + + G G+NL G N L+ W+ QQ + Sbjct: 646 MNINKRQKLVDKFNNPEGKEFVFLLSSKAGGCGINL-IGANRLILVDPDWNPASDQQALA 704 Query: 150 RIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 R+ + G + F+Y IA +I+E + QR K + ++++ Sbjct: 705 RVW-----RDGQTKNCFIYRFIATGSIEEKIFQRQSAKLQLSSCVVDS 747 >gi|226360675|ref|YP_002778453.1| helicase [Rhodococcus opacus B4] gi|226239160|dbj|BAH49508.1| putative helicase [Rhodococcus opacus B4] Length = 947 Score = 106 bits (265), Expect = 2e-21, Method: Composition-based stats. Identities = 35/212 (16%), Positives = 70/212 (33%), Gaps = 26/212 (12%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASK--TVKCLQLANGAVYYDEEKHWK----EVHDEK 55 Y ++ ++ + A K Q+ N ++ + + K Sbjct: 712 ALYRAVVDDMMAQIKDKKGMKRKGAVLAALTKLKQVCNHPAHFLRDGSAVMRRGQHRSGK 771 Query: 56 IKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQ-----------GRTLDKDPCTIQ 102 + +E I++ A+ ++ F + + G K + Sbjct: 772 LGLVEDILDSVVADGEKALLFTQFREFGDLVVPYLAERFGTPVPFLHGGVPKQKRDDMVA 831 Query: 103 EWNEGK-IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGF 161 + P++ + G GLNL N +V WW+ Q +R + G Sbjct: 832 SFQGDDGPPIMMLSLKAGGTGLNLT-AANHVVHLDRWWNPAVENQATDR-----AFRIGQ 885 Query: 162 KRAVFVYYLIAQNTIDELVLQRLRTKSTIQDL 193 +R V V L+ T++E + + TK + DL Sbjct: 886 RRDVQVRKLVCVGTLEERIDAMIATKQELADL 917 >gi|330798162|ref|XP_003287124.1| hypothetical protein DICPUDRAFT_87450 [Dictyostelium purpureum] gi|325082902|gb|EGC36370.1| hypothetical protein DICPUDRAFT_87450 [Dictyostelium purpureum] Length = 521 Score = 106 bits (265), Expect = 2e-21, Method: Composition-based stats. Identities = 32/177 (18%), Positives = 67/177 (37%), Gaps = 18/177 (10%) Query: 39 AVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQ-----KAFPQGRT 93 +Y D + L +++ + ++ + S L ++ + P R Sbjct: 341 PIYDSSNWKSSTKIDSLLDELNKVLKNEPDSKCLIFSQWTSMLDLIEIPLNINSMPFVRL 400 Query: 94 LDKDPC-----TIQEW-NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQM 147 K P I+ + E I + + G GLNL + + WW+ +Q Sbjct: 401 DGKIPQKQREVAIKRFKEEPSIKIFLISIKAGGLGLNLVVASH-VFLCDPWWNPATEEQA 459 Query: 148 IERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIH 204 I+R+ + G + V V +++I+E +L+ ++K + L +KK+ Sbjct: 460 IDRV-----YRIGQNKNVNVIRFFIKDSIEEKILELQKSKKDLAKEAL-TMKKQPQQ 510 >gi|312139122|ref|YP_004006458.1| ATP-dependent DNA helicase [Rhodococcus equi 103S] gi|311888461|emb|CBH47773.1| putative ATP-dependent DNA helicase [Rhodococcus equi 103S] Length = 945 Score = 106 bits (265), Expect = 2e-21, Method: Composition-based stats. Identities = 33/214 (15%), Positives = 69/214 (32%), Gaps = 26/214 (12%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKT--VKCLQLANGAV--YYDEEKHWKEVH--DEK 55 Y ++ ++ A + + Q+ N D + K Sbjct: 710 ALYRAVVDDMLKKIKDTEGMQRKGAVLSALTRLKQVCNHPAHFLGDGSGVLRRGRHRSGK 769 Query: 56 IKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQ-----------GRTLDKDPCTIQ 102 + +E I++ A+ ++ F + + G + ++ Sbjct: 770 LALVEDILDSVTADGERALLFTQFREFGDLVVPYLEERFGTDVPFLHGGVPKARRDRMVE 829 Query: 103 EWNEGK-IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGF 161 + P++ + G GLNL N +V WW+ Q +R + G Sbjct: 830 RFQGDDGPPVMLLSLKAGGTGLNLT-AANHVVHLDRWWNPAVENQATDR-----AFRIGQ 883 Query: 162 KRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 +R V V L+ T++E + + K + DL + Sbjct: 884 RRDVQVRKLVCVGTLEERIDAMISNKQELADLAI 917 >gi|302852393|ref|XP_002957717.1| hypothetical protein VOLCADRAFT_107785 [Volvox carteri f. nagariensis] gi|300257011|gb|EFJ41266.1| hypothetical protein VOLCADRAFT_107785 [Volvox carteri f. nagariensis] Length = 610 Score = 106 bits (265), Expect = 2e-21, Method: Composition-based stats. Identities = 43/209 (20%), Positives = 80/209 (38%), Gaps = 25/209 (11%) Query: 14 DLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIK-------ALEVIIEKA 66 D + E A ++ + LQL + K+ K++ L+ + E Sbjct: 224 DADASDAEVAVGAERSAQLLQLCGRFMLRRTCGLMKKYLPPKVEQVAVLEMMLKAVREGG 283 Query: 67 NAAPIIVAYHFNSDLARLQ---------KAFPQGRTLDKDPCTIQE-WNEGKIP--LLFA 114 + +++ ++ L L+ G K I + +N+ P LL Sbjct: 284 SGDKVVLVSNYTEALDVLEVMCRTHGWVSLRLDGSCSVKSRQPIVDTFNDPSHPSFLLLL 343 Query: 115 HPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQN 174 + G GLN+ G N LV F W+ Q + R+ + G K+ V++Y L+ Sbjct: 344 SSKAGGVGLNI-IGANRLVLFDPDWNPANDLQAMARVW-----RQGQKKKVWIYRLLTTG 397 Query: 175 TIDELVLQRLRTKSTIQDLLLNALKKETI 203 TI+E V QR K + +++ ++ Sbjct: 398 TIEEKVYQRQLAKQGLSAAVVDDTAAQSR 426 >gi|281208073|gb|EFA82251.1| SNF2-related domain-containing protein [Polysphondylium pallidum PN500] Length = 2100 Score = 106 bits (265), Expect = 2e-21, Method: Composition-based stats. Identities = 28/146 (19%), Positives = 59/146 (40%), Gaps = 17/146 (11%) Query: 67 NAAPIIVAYHFNSDLARLQK----------AFPQGRTLDKDPCTIQEWN-EGKIPLLFAH 115 +++ + L+ L+ + ++ + I + Sbjct: 1787 EGHRVLIYCQMTKMINILEDFVIFRKYKYLRLDGSSKLEDRRDLVDDFQTDPSIFVFLLS 1846 Query: 116 PASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNT 175 +CG G+NL + ++FF W+ +Q ++R + G + V VY LI + T Sbjct: 1847 TRACGIGINLT-SADTVIFFDSDWNPTMDEQAMDRC-----HRLGQLKPVTVYRLITKGT 1900 Query: 176 IDELVLQRLRTKSTIQDLLLNALKKE 201 ++E V++R + K IQ +++ K E Sbjct: 1901 VEEKVIKRAKQKHQIQSIVIAGGKFE 1926 >gi|194855241|ref|XP_001968502.1| GG24469 [Drosophila erecta] gi|292630862|sp|B3NAN8|RAD54_DROER RecName: Full=DNA repair and recombination protein RAD54-like; AltName: Full=Protein okra gi|190660369|gb|EDV57561.1| GG24469 [Drosophila erecta] Length = 784 Score = 106 bits (265), Expect = 2e-21, Method: Composition-based stats. Identities = 30/151 (19%), Positives = 63/151 (41%), Gaps = 19/151 (12%) Query: 58 ALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGR----------TLDKDPCTIQEWNEG 107 L I N +++ ++ L ++ + + ++ K + +N+ Sbjct: 507 MLAAIRADGNDKVVLI-SNYTQTLDLFEQLARKRKYGFVRLDGTMSIKKRSKVVDRFNDP 565 Query: 108 KIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 + L + G GLNL G N L F W+ +Q + R+ + G K+ Sbjct: 566 ESDSFLFMLSSKAGGCGLNL-IGANRLFMFDPDWNPANDEQAMARVW-----RDGQKKPC 619 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 ++Y L+A +I+E +LQR K ++ +++ Sbjct: 620 YIYRLVASGSIEEKILQRQTHKKSLSSTIID 650 >gi|170050421|ref|XP_001861304.1| helicase [Culex quinquefasciatus] gi|167872038|gb|EDS35421.1| helicase [Culex quinquefasciatus] Length = 1024 Score = 106 bits (265), Expect = 2e-21, Method: Composition-based stats. Identities = 48/222 (21%), Positives = 90/222 (40%), Gaps = 37/222 (16%) Query: 6 KFQRELYCDLQGENIEAFNSASKTVK------CLQL---ANGAVYYDE-------EKHWK 49 K QRE Y + ++I+ N A K K +QL N +D W Sbjct: 370 KMQREWYTKILMKDIDIVNGAGKMEKMRLQNILMQLRKCTNHPYLFDGAEPGPPYTTDWH 429 Query: 50 EV-HDEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQ---------KAFPQGRTLDKD 97 V + K+ LE ++ K + +++ L L+ G+T +D Sbjct: 430 LVENSGKMIILEKLLNKLQEQGSRVLIFSQMTRMLDILEDYCHWRGYNYCRLDGQTPHED 489 Query: 98 P-CTIQEWNE--GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 I E+N + + + G G+NL ++++ + W+ + Q ++R Sbjct: 490 RTKMIDEYNAEGSQKFIFMLSTRAGGLGINL-ATADVVIIYDSDWNPQMDLQAMDR---- 544 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + G K+ V V+ LI +NTI+E +++R K + L++ Sbjct: 545 -AHRIGQKKQVRVFRLITENTIEEKIVERAEIKLKLDKLVIQ 585 >gi|164419749|ref|NP_620604.2| probable global transcription activator SNF2L1 isoform b [Homo sapiens] gi|57208176|emb|CAI42682.1| SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1 [Homo sapiens] gi|57208837|emb|CAI42612.1| SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1 [Homo sapiens] Length = 1042 Score = 106 bits (265), Expect = 2e-21, Method: Composition-based stats. Identities = 43/230 (18%), Positives = 90/230 (39%), Gaps = 40/230 (17%) Query: 1 MKQY---HKFQRELYCDLQGENIEAFNSASKTVK------CLQL---ANGAVYYD----- 43 +K Y K QRE Y + ++I+ NS+ K K +QL N +D Sbjct: 413 IKIYLGLSKMQREWYTKILMKDIDVLNSSGKMDKMRLLNILMQLRKCCNHPYLFDGAEPG 472 Query: 44 ---EEKHWKEVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQ---------KAFP 89 + K+ L+ ++ K + +++ L L+ Sbjct: 473 PPYTTDEHIVSNSGKMVVLDKLLAKLKEQGSRVLIFSQMTRLLDILEDYCMWRGYEYCRL 532 Query: 90 QGRTL-DKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 G+T ++ I+ +N + + G G+NL ++++ + W+ + Q Sbjct: 533 DGQTPHEEREEAIEAFNAPNSSKFIFMLSTRAGGLGINL-ASADVVILYDSDWNPQVDLQ 591 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 ++R + G K+ V V+ LI NT++E +++R K + +++ Sbjct: 592 AMDR-----AHRIGQKKPVRVFRLITDNTVEERIVERAEIKLRLDSIVIQ 636 >gi|288559877|ref|YP_003423363.1| helicase SNF2 family [Methanobrevibacter ruminantium M1] gi|288542587|gb|ADC46471.1| helicase SNF2 family [Methanobrevibacter ruminantium M1] Length = 698 Score = 106 bits (265), Expect = 2e-21, Method: Composition-based stats. Identities = 34/212 (16%), Positives = 76/212 (35%), Gaps = 22/212 (10%) Query: 1 MKQYHKFQRELYCDLQG--ENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKA 58 +K Y+ ++ ++ Q N + K K++ Sbjct: 471 IKLYNAVLDGIFEEIDELKGIERRGTILKTITSLKQTCNHPAQFLGSGKPKIKESGKMEL 530 Query: 59 LEVIIE--KANAAPIIVAYHFNSDLARLQKAFPQ-----------GRTLDKDPCTIQEWN 105 L I+E +++ + +Q + ++ ++ I + Sbjct: 531 LITILENIMDMDEKVLIFTQYVKMGEIIQDLVSKKLKREVLFLHGSQSRNEKAEIIDRFQ 590 Query: 106 EGKI-PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA 164 E +L A + G GLNL N ++ + LWW+ Q +R+ + G ++ Sbjct: 591 EDDNYKILIATLKTGGVGLNLTAASN-VIHYDLWWNPAVENQATDRV-----HRIGQEKD 644 Query: 165 VFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 V VY I + T++E + ++TK + + ++ Sbjct: 645 VMVYRFITKGTLEEEIDSIIKTKLDLAEKAIS 676 >gi|119632238|gb|EAX11833.1| SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, isoform CRA_a [Homo sapiens] Length = 946 Score = 106 bits (265), Expect = 2e-21, Method: Composition-based stats. Identities = 43/230 (18%), Positives = 90/230 (39%), Gaps = 40/230 (17%) Query: 1 MKQY---HKFQRELYCDLQGENIEAFNSASKTVK------CLQL---ANGAVYYD----- 43 +K Y K QRE Y + ++I+ NS+ K K +QL N +D Sbjct: 335 IKIYLGLSKMQREWYTKILMKDIDVLNSSGKMDKMRLLNILMQLRKCCNHPYLFDGAEPG 394 Query: 44 ---EEKHWKEVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQ---------KAFP 89 + K+ L+ ++ K + +++ L L+ Sbjct: 395 PPYTTDEHIVSNSGKMVVLDKLLAKLKEQGSRVLIFSQMTRLLDILEDYCMWRGYEYCRL 454 Query: 90 QGRTL-DKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 G+T ++ I+ +N + + G G+NL ++++ + W+ + Q Sbjct: 455 DGQTPHEEREEAIEAFNAPNSSKFIFMLSTRAGGLGINL-ASADVVILYDSDWNPQVDLQ 513 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 ++R + G K+ V V+ LI NT++E +++R K + +++ Sbjct: 514 AMDR-----AHRIGQKKPVRVFRLITDNTVEERIVERAEIKLRLDSIVIQ 558 >gi|162312570|ref|XP_001713118.1| SNF2 family helicase Swr1 [Schizosaccharomyces pombe 972h-] gi|46397086|sp|O13682|SWR1_SCHPO RecName: Full=Helicase swr1 gi|159884045|emb|CAA22447.2| SNF2 family helicase Swr1 [Schizosaccharomyces pombe] Length = 1288 Score = 106 bits (265), Expect = 2e-21, Method: Composition-based stats. Identities = 34/188 (18%), Positives = 75/188 (39%), Gaps = 19/188 (10%) Query: 23 FNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSD 80 + + K Q + +K + K++ L+ +++ +N +++ Sbjct: 960 YEVSRKINPLHQASTRLAIAFPDKRLLQYDCGKLQVLDRLLKDLVSNGHRVLIFTQMTKV 1019 Query: 81 LARLQKAF---------PQGRTLDKDPCTI--QEWNEGKIPLLFAHPASCGHGLNLQYGG 129 L L++ G T + + + N+ KIP+ S G G+NL G Sbjct: 1020 LDILEQFLNIHGHRYLRLDGATKIEQRQILTERFNNDDKIPVFILSTRSGGLGINLT-GA 1078 Query: 130 NILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKST 189 + ++F+ W+ + Q R + G R V +Y LI++ T++ +L+R K Sbjct: 1079 DTVIFYDSDWNPQLDAQA-----QDRSHRIGQTRDVHIYRLISEYTVESNMLRRANQKRM 1133 Query: 190 IQDLLLNA 197 + +++ Sbjct: 1134 LDKIVIQG 1141 >gi|147921752|ref|YP_684426.1| DNA/RNA helicase [uncultured methanogenic archaeon RC-I] gi|110619822|emb|CAJ35100.1| putative DNA/RNA helicase (SNF2 family) [uncultured methanogenic archaeon RC-I] Length = 1042 Score = 106 bits (265), Expect = 2e-21, Method: Composition-based stats. Identities = 31/213 (14%), Positives = 67/213 (31%), Gaps = 26/213 (12%) Query: 3 QYHKFQRELYCDLQGENIEAFNSASK--TVKCLQLANGAVYYDEEKHWKE----VHDEKI 56 Y + + +K Q+ + Y + + + K+ Sbjct: 806 LYEAIVENMLKSIDKATAMQRRGIVLASLMKLKQVCDHPSLYIKTGAVTDDKTLIRSGKL 865 Query: 57 KALEVIIEKA--NAAPIIVAYHFNSDLARLQKAFP-----------QGRTLDKDPCTIQE 103 K L ++E+A +++ F L+ G + Sbjct: 866 KRLTELLEEALAEGDSVLIFTQFVEMGEMLKAYLQSTFDEEALFLHGGVPQKARDKMVLR 925 Query: 104 WNEGKIP-LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFK 162 + E P + + G GLNL + + F WW+ Q +R + G Sbjct: 926 FGEKDGPRIFIVSLKAGGVGLNLTKASH-VFHFDRWWNPAVENQATDR-----AYRIGQS 979 Query: 163 RAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 + V V+ + T++E + + + +K + +L Sbjct: 980 KNVLVHKFVCAGTLEEKIDELIESKKALSANIL 1012 >gi|315224242|ref|ZP_07866081.1| Snf2 family helicase [Capnocytophaga ochracea F0287] gi|314945790|gb|EFS97800.1| Snf2 family helicase [Capnocytophaga ochracea F0287] Length = 950 Score = 106 bits (265), Expect = 2e-21, Method: Composition-based stats. Identities = 36/191 (18%), Positives = 79/191 (41%), Gaps = 20/191 (10%) Query: 18 ENIEAFNSASKTVKCLQLANGAVYYD-EEKHWKEVHDEKIKALEVIIEKANAAPIIVAYH 76 E I FN+ + ++ +++ D E K ++E I +E +++ + ++ Sbjct: 751 EPITEFNTLNMLMRLRKISLHPKLVDKESKITSGKYEEVINYMEELLQSS--RKALIFSS 808 Query: 77 FNSDLAR---------LQKAFPQGRT--LDKDPCTIQEWNEGKIPLLFAHPASCGHGLNL 125 F S LA ++ A G T ++ N I F + GLNL Sbjct: 809 FVSHLALYEEWCNKKGIKYAKLTGETPSFERKNQVEMFQNNPTISFFFISLKAGEVGLNL 868 Query: 126 QYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLR 185 + ++ WW+ +Q I R + G + V V ++++TI+E +++ + Sbjct: 869 TQ-ASYVLLLDPWWNPFSEKQAIGR-----AHRIGQQNKVNVIRFVSKDTIEEKIIKLQK 922 Query: 186 TKSTIQDLLLN 196 +K + + +++ Sbjct: 923 SKRELSENIID 933 >gi|119632239|gb|EAX11834.1| SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, isoform CRA_b [Homo sapiens] Length = 1029 Score = 106 bits (265), Expect = 2e-21, Method: Composition-based stats. Identities = 43/230 (18%), Positives = 90/230 (39%), Gaps = 40/230 (17%) Query: 1 MKQY---HKFQRELYCDLQGENIEAFNSASKTVK------CLQL---ANGAVYYD----- 43 +K Y K QRE Y + ++I+ NS+ K K +QL N +D Sbjct: 384 IKIYLGLSKMQREWYTKILMKDIDVLNSSGKMDKMRLLNILMQLRKCCNHPYLFDGAEPG 443 Query: 44 ---EEKHWKEVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQ---------KAFP 89 + K+ L+ ++ K + +++ L L+ Sbjct: 444 PPYTTDEHIVSNSGKMVVLDKLLAKLKEQGSRVLIFSQMTRLLDILEDYCMWRGYEYCRL 503 Query: 90 QGRTL-DKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 G+T ++ I+ +N + + G G+NL ++++ + W+ + Q Sbjct: 504 DGQTPHEEREEAIEAFNAPNSSKFIFMLSTRAGGLGINL-ASADVVILYDSDWNPQVDLQ 562 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 ++R + G K+ V V+ LI NT++E +++R K + +++ Sbjct: 563 AMDR-----AHRIGQKKPVRVFRLITDNTVEERIVERAEIKLRLDSIVIQ 607 >gi|226307453|ref|YP_002767413.1| helicase [Rhodococcus erythropolis PR4] gi|226186570|dbj|BAH34674.1| putative helicase [Rhodococcus erythropolis PR4] Length = 938 Score = 106 bits (265), Expect = 2e-21, Method: Composition-based stats. Identities = 34/212 (16%), Positives = 74/212 (34%), Gaps = 26/212 (12%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKT--VKCLQLANGAVYYDEEKHWK----EVHDEK 55 Y E+ ++G A + K Q+ N ++ + + K Sbjct: 703 ALYRAVVDEMMAQIKGTEGMKRKGAVLSALTKLKQVCNHPAHFLRDGSPVMRRGQHRSGK 762 Query: 56 IKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQ-----------GRTLDKDPCTIQ 102 + +E I+E A+ +++ F + G + ++ Sbjct: 763 LGLVEDIVESVTADDEKVLLFTQFREFGELVVPYLADRFTTEVPFLHGGVSKAGRDAMVE 822 Query: 103 EWNEGK-IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGF 161 + P++ + G GLNL N +V WW+ Q +R+ + G Sbjct: 823 AFQGADGPPIMVLSLKAGGTGLNLT-AANHVVHLDRWWNPAVENQATDRVF-----RIGQ 876 Query: 162 KRAVFVYYLIAQNTIDELVLQRLRTKSTIQDL 193 ++ V V ++ T++E + + +KS + +L Sbjct: 877 RKNVQVRKMVCVGTLEERIDTMIASKSELAEL 908 >gi|156844645|ref|XP_001645384.1| hypothetical protein Kpol_534p5 [Vanderwaltozyma polyspora DSM 70294] gi|206557735|sp|A7TJI3|INO80_VANPO RecName: Full=Putative DNA helicase INO80 gi|156116046|gb|EDO17526.1| hypothetical protein Kpol_534p5 [Vanderwaltozyma polyspora DSM 70294] Length = 1556 Score = 106 bits (264), Expect = 2e-21, Method: Composition-based stats. Identities = 26/158 (16%), Positives = 62/158 (39%), Gaps = 19/158 (12%) Query: 53 DEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQK----------AFPQGRTLDKDPCT 100 K+K L+ ++ + +++ + + +++ L+ Sbjct: 1376 SAKLKKLDELLVELKKGDHRVLIYFQMTKMMDLMEEYLTYRQYSHIRLDGSSKLEDRRDL 1435 Query: 101 IQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQA 159 + +W I + + G G+NL + ++F+ W+ Q ++R + Sbjct: 1436 VHDWQTRPDIFIFLLSTRAGGLGINLT-AADTVIFYDSDWNPTIDSQAMDR-----AHRL 1489 Query: 160 GFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 G R V VY L+ + TI+E + R + K +Q +++ Sbjct: 1490 GQTRQVTVYRLLIRGTIEERMRDRAKQKEHVQQVVMEG 1527 >gi|283781798|ref|YP_003372553.1| Non-specific serine/threonine protein kinase [Pirellula staleyi DSM 6068] gi|283440251|gb|ADB18693.1| Non-specific serine/threonine protein kinase [Pirellula staleyi DSM 6068] Length = 594 Score = 106 bits (264), Expect = 2e-21, Method: Composition-based stats. Identities = 45/206 (21%), Positives = 77/206 (37%), Gaps = 27/206 (13%) Query: 4 YHKFQRELYCDLQ--GENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEV 61 Y ++E DL G+ I + ++ Q+ N K++ LE Sbjct: 371 YQMAEKEGVMDLNNMGDQITIQHVFELVLRLKQICNF--------DPVTGCSAKLERLEA 422 Query: 62 IIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTL---------DKDPCTIQEWNEGKIP 110 +E+ A+ IV + L ++ + + L +DP Q + K Sbjct: 423 DLEEVAASGKKAIVFSQWVRCLDQITEKLQRFNPLSYHGQIPSKKRDPILKQFKEDKKHS 482 Query: 111 LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYL 170 +L + GLNLQ+ + F WW+ Q I R + G V V + Sbjct: 483 VLLMSYGAGSVGLNLQF-CEYVFLFDRWWNPAIEDQAINR-----AHRIGAAGPVTVTRM 536 Query: 171 IAQNTIDELVLQRLRTKSTIQDLLLN 196 +A TI+E + Q L K I + +L+ Sbjct: 537 LAMGTIEERINQVLEHKREIFNTILS 562 >gi|194271429|gb|ACF37172.1| SNF2LT [Homo sapiens] Length = 776 Score = 106 bits (264), Expect = 2e-21, Method: Composition-based stats. Identities = 43/230 (18%), Positives = 89/230 (38%), Gaps = 40/230 (17%) Query: 1 MKQY---HKFQRELYCDLQGENIEAFNSASKTVK------CLQL---ANGAVYYD----- 43 +K Y K QRE Y + ++I+ NS+ K K +QL N +D Sbjct: 413 IKIYLGLSKMQREWYTKILMKDIDVLNSSGKMDKMRLLNILMQLRKCCNHPYLFDGAEPG 472 Query: 44 ---EEKHWKEVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQ---------KAFP 89 + K+ L+ ++ K + +++ L L+ Sbjct: 473 PPYTTDEHIVSNSGKMVVLDKLLAKLKEQGSRVLIFSQMTRLLDILEDYCMWRGYEYCRL 532 Query: 90 QGRTL-DKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 G+T ++ I+ +N + + G G+NL ++++ + W + Q Sbjct: 533 DGQTPHEEREEAIEAFNAPNSSKFIFMLSTRAGGLGINL-ASADVVILYDSDWSPQVDLQ 591 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 ++R + G K+ V V+ LI NT++E +++R K + +++ Sbjct: 592 AMDR-----AHRIGQKKPVRVFRLITDNTVEERIVERAEIKLRLDSIVIQ 636 >gi|222623475|gb|EEE57607.1| hypothetical protein OsJ_07989 [Oryza sativa Japonica Group] Length = 2104 Score = 106 bits (264), Expect = 2e-21, Method: Composition-based stats. Identities = 35/166 (21%), Positives = 72/166 (43%), Gaps = 19/166 (11%) Query: 44 EEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAF---------PQGR 92 ++ + K++ L +++ + + ++ L L++ G Sbjct: 1129 PDRRLIQFDCGKLQELAILLRRLKSEGHRALIFTQMTKMLDILEEFINLYGYTYLRLDGS 1188 Query: 93 TLDKDPCTI-QEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 T ++ T+ Q +N K L S G G+NL G + ++F+ W+ QQ +R Sbjct: 1189 TQPEERQTLMQRFNTNPKFFLFILSTRSGGVGINL-VGADTVIFYDSDWNPAMDQQAQDR 1247 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + G R V +Y LI+++TI+E +L++ K + DL++ Sbjct: 1248 C-----HRIGQTREVHIYRLISESTIEENILKKANQKRALDDLVIQ 1288 >gi|211828096|gb|AAH51825.2| SMARCA1 protein [Homo sapiens] Length = 965 Score = 106 bits (264), Expect = 2e-21, Method: Composition-based stats. Identities = 43/230 (18%), Positives = 90/230 (39%), Gaps = 40/230 (17%) Query: 1 MKQY---HKFQRELYCDLQGENIEAFNSASKTVK------CLQL---ANGAVYYD----- 43 +K Y K QRE Y + ++I+ NS+ K K +QL N +D Sbjct: 350 IKIYLGLSKMQREWYTKILMKDIDVLNSSGKMDKMRLLNILMQLRKCCNHPYLFDGAEPG 409 Query: 44 ---EEKHWKEVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQ---------KAFP 89 + K+ L+ ++ K + +++ L L+ Sbjct: 410 PPYTTDEHIVSNSGKMVVLDKLLAKLKEQGSRVLIFSQMTRLLDILEDYCMWRGYEYCRL 469 Query: 90 QGRTL-DKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 G+T ++ I+ +N + + G G+NL ++++ + W+ + Q Sbjct: 470 DGQTPHEEREEAIEAFNAPNSSKFIFMLSTRAGGLGINL-ASADVVILYDSDWNPQVDLQ 528 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 ++R + G K+ V V+ LI NT++E +++R K + +++ Sbjct: 529 AMDR-----AHRIGQKKPVRVFRLITDNTVEERIVERAEIKLRLDSIVIQ 573 >gi|167535609|ref|XP_001749478.1| hypothetical protein [Monosiga brevicollis MX1] gi|163772106|gb|EDQ85763.1| predicted protein [Monosiga brevicollis MX1] Length = 1903 Score = 106 bits (264), Expect = 2e-21, Method: Composition-based stats. Identities = 39/227 (17%), Positives = 81/227 (35%), Gaps = 31/227 (13%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKAL-- 59 + Y + + Y L + + ++ + AN +D+ + E HD +K L Sbjct: 881 RFYKELLAKNYSFLTATTQGVSSLNNLLMQLRKCANHPYLFDDAEPEVEDHDAMVKLLVG 940 Query: 60 ----EVIIEKA------NAAPIIVAYHFNSDLARLQK----------AFPQGRTLDKDPC 99 ++++ +++ L LQ + Sbjct: 941 ASGKTLLLDMMLRKLKEQGHRVLIFSQMTRMLDILQDIMMYRGYHCCRLDGNTDILTRQE 1000 Query: 100 TIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 I E++ + + G G+NL + ++ F W+ Q + R Sbjct: 1001 QIDEFSRPDSDAFVFLLSTRAGGLGINLTT-ADTIIIFDSDWNPHADLQALAR-----AH 1054 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL-LNALKKETI 203 + G K V VY ++ NT++E +L+R R K + + ++ LKK + Sbjct: 1055 RIGQKNLVMVYRFVSVNTVEERILRRAREKLRLDQAVRMDKLKKSEL 1101 >gi|312221230|emb|CBY01171.1| hypothetical protein [Leptosphaeria maculans] Length = 1275 Score = 106 bits (264), Expect = 2e-21, Method: Composition-based stats. Identities = 27/161 (16%), Positives = 66/161 (40%), Gaps = 19/161 (11%) Query: 50 EVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQK----------AFPQGRTLDKD 97 K+ L+ ++++ A +++ + + +++ L+ Sbjct: 988 VTDSGKLAQLDALLKELKAGDHRVLLYFQMTRMIDLMEEYLTYRNYKYCRLDGSTKLEDR 1047 Query: 98 PCTIQEWNEGK-IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 T+ ++ + I + + G G+NL + ++F+ W+ Q ++R Sbjct: 1048 RDTVADFQSDRSIFVFLLSTRAGGLGINLT-SADTVIFYDSDWNPTIDSQAMDR-----A 1101 Query: 157 RQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + G R V VY LI + TI+E + +R K +Q ++++ Sbjct: 1102 HRLGQTRQVTVYRLITRGTIEERIRKRALQKEEVQRVVISG 1142 >gi|67464359|pdb|1Z63|A Chain A, Sulfolobus Solfataricus Swi2SNF2 ATPASE CORE IN COMPLEX With Dsdna gi|67464360|pdb|1Z63|B Chain B, Sulfolobus Solfataricus Swi2SNF2 ATPASE CORE IN COMPLEX With Dsdna Length = 500 Score = 106 bits (264), Expect = 2e-21, Method: Composition-based stats. Identities = 35/186 (18%), Positives = 67/186 (36%), Gaps = 21/186 (11%) Query: 26 ASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLAR 83 S +K Q+ + + K IIE+A I + F Sbjct: 298 LSTLLKLKQIVDHPALLKGGEQSVR-RSGKXIRTXEIIEEALDEGDKIAIFTQFVDXGKI 356 Query: 84 LQKAFPQ----------GRTLDKDPCTI--QEWNEGKIPLLFAHPASCGHGLNLQYGGNI 131 ++ + G K+ I + N + + + G G+NL N Sbjct: 357 IRNIIEKELNTEVPFLYGELSKKERDDIISKFQNNPSVKFIVLSVKAGGFGINLT-SANR 415 Query: 132 LVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQ 191 ++ F WW+ Q +R+ + G R V V+ LI+ T++E + Q L K ++ Sbjct: 416 VIHFDRWWNPAVEDQATDRV-----YRIGQTRNVIVHKLISVGTLEEKIDQLLAFKRSLF 470 Query: 192 DLLLNA 197 ++++ Sbjct: 471 KDIISS 476 >gi|320581375|gb|EFW95596.1| hypothetical protein HPODL_2930 [Pichia angusta DL-1] Length = 687 Score = 106 bits (264), Expect = 2e-21, Method: Composition-based stats. Identities = 29/157 (18%), Positives = 68/157 (43%), Gaps = 19/157 (12%) Query: 53 DEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQK----------AFPQGRTLDKDPCT 100 K++ L+ ++ + +++ F S L +++ G T D Sbjct: 456 SAKLQLLDQLLPALHKDGHRVLIFTQFTSMLDLIEEFVNNTLGYKSCRIDGSTDQADRKD 515 Query: 101 -IQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQA 159 I ++ ++ + + G GLNL + ++ F W+ + Q ++R+ + Sbjct: 516 EIDRFSTEEVDVFLLSTRAGGLGLNLT-AADSVILFDSDWNPQVDLQAMDRV-----HRI 569 Query: 160 GFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 G + V VY L+ NT++E++L + +K ++ L++ Sbjct: 570 GQTKPVSVYRLVIANTVEEIMLAKADSKRRLERLVIQ 606 >gi|292630953|sp|B4NXB8|RAD54_DROYA RecName: Full=DNA repair and recombination protein RAD54-like; AltName: Full=Protein okra Length = 784 Score = 106 bits (264), Expect = 2e-21, Method: Composition-based stats. Identities = 29/151 (19%), Positives = 63/151 (41%), Gaps = 19/151 (12%) Query: 58 ALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGR----------TLDKDPCTIQEWNEG 107 L I N +++ ++ L ++ + + ++ K + +N+ Sbjct: 507 MLAAIRADGNDKVVLI-SNYTQTLDLFEQLARKRKYGFVRLDGTMSIKKRSKVVDRFNDP 565 Query: 108 KIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 + L + G GLNL G N L F W+ +Q + R+ + G K+ Sbjct: 566 ESDSFLFMLSSKAGGCGLNL-IGANRLFMFDPDWNPANDEQAMARVW-----RDGQKKPC 619 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 ++Y ++A +I+E +LQR K ++ +++ Sbjct: 620 YIYRMVASGSIEEKILQRQTHKKSLSSTIID 650 >gi|195470937|ref|XP_002087763.1| GE14966 [Drosophila yakuba] gi|194173864|gb|EDW87475.1| GE14966 [Drosophila yakuba] Length = 772 Score = 106 bits (264), Expect = 2e-21, Method: Composition-based stats. Identities = 29/151 (19%), Positives = 63/151 (41%), Gaps = 19/151 (12%) Query: 58 ALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGR----------TLDKDPCTIQEWNEG 107 L I N +++ ++ L ++ + + ++ K + +N+ Sbjct: 495 MLAAIRADGNDKVVLI-SNYTQTLDLFEQLARKRKYGFVRLDGTMSIKKRSKVVDRFNDP 553 Query: 108 KIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 + L + G GLNL G N L F W+ +Q + R+ + G K+ Sbjct: 554 ESDSFLFMLSSKAGGCGLNL-IGANRLFMFDPDWNPANDEQAMARVW-----RDGQKKPC 607 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 ++Y ++A +I+E +LQR K ++ +++ Sbjct: 608 YIYRMVASGSIEEKILQRQTHKKSLSSTIID 638 >gi|190345830|gb|EDK37782.2| hypothetical protein PGUG_01880 [Meyerozyma guilliermondii ATCC 6260] Length = 952 Score = 106 bits (264), Expect = 2e-21, Method: Composition-based stats. Identities = 25/158 (15%), Positives = 63/158 (39%), Gaps = 19/158 (12%) Query: 53 DEKIKALEVIIEKANA--APIIVAYHFNSDLARLQK----------AFPQGRTLDKDPCT 100 K+ L+ ++ +++ + + +++ L+ Sbjct: 734 SGKLARLDQLLVDLKGDDHRVLIYFQMTKMMDLMEEYLTYRQHRYIRLDGSSKLEDRRDL 793 Query: 101 IQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQA 159 + +W + +I + + G G+NL + ++F+ W+ Q ++R + Sbjct: 794 VHDWQTKPEIFVFLLSTRAGGLGINLT-AADTVIFYDSDWNPTIDSQAMDR-----AHRL 847 Query: 160 GFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 G + V VY L+A+ TI+E + R + K +Q +++ Sbjct: 848 GQTKQVTVYRLLARGTIEERMRNRAKQKEQVQQVVMEG 885 >gi|288555411|ref|YP_003427346.1| helicase Snf2 family [Bacillus pseudofirmus OF4] gi|288546571|gb|ADC50454.1| helicase Snf2 family [Bacillus pseudofirmus OF4] Length = 1064 Score = 106 bits (264), Expect = 2e-21, Method: Composition-based stats. Identities = 37/216 (17%), Positives = 80/216 (37%), Gaps = 23/216 (10%) Query: 1 MKQYHKFQRELYCDLQGENIEA--FNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKA 58 + Q + + ++ + + + + K Q+ EE + K+ Sbjct: 844 LAQVKQLRSDVDDAISSDQFQKKRIEILAGLTKLRQICCHPRLVSEEDEVE---SGKLLR 900 Query: 59 LEVIIEKA--NAAPIIVAYHFNSDLARLQKAFPQGR----TLDKDPCTIQE------WNE 106 L +E+ +++ F S LA ++ F + LD ++ +N+ Sbjct: 901 LMEYVEEGMEAGQRMVIFSQFTSMLAIIRAEFEERGWEFFYLDGQTPAVERLRLADQFNQ 960 Query: 107 GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVF 166 G+ L + G GG+ ++ + WW+ +Q +R+ + G + V Sbjct: 961 GEKSLFLVSLKAGGT-GLNLTGGDTVILYDTWWNPAIEEQAADRV-----YRFGQTKNVQ 1014 Query: 167 VYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKET 202 V LIA TI+E +L K + D ++ + + Sbjct: 1015 VIKLIANGTIEEKILALHEKKKALVDAVIQPGEAQM 1050 >gi|325673577|ref|ZP_08153268.1| SNF2 family superfamily II DNA/RNA helicase [Rhodococcus equi ATCC 33707] gi|325555598|gb|EGD25269.1| SNF2 family superfamily II DNA/RNA helicase [Rhodococcus equi ATCC 33707] Length = 945 Score = 106 bits (264), Expect = 2e-21, Method: Composition-based stats. Identities = 33/214 (15%), Positives = 69/214 (32%), Gaps = 26/214 (12%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKT--VKCLQLANGAV--YYDEEKHWKEVH--DEK 55 Y ++ ++ A + + Q+ N D + K Sbjct: 710 ALYRAVVDDMLKKIKDTEGMQRKGAVLSALTRLKQVCNHPAHFLGDGSGVLRRGRHRSGK 769 Query: 56 IKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQ-----------GRTLDKDPCTIQ 102 + +E I++ A+ ++ F + + G + ++ Sbjct: 770 LALVEDILDSVTADGERALLFTQFREFGDLVVPYLEERFGTDVPFLHGGVPKARRDRMVE 829 Query: 103 EWNEGK-IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGF 161 + P++ + G GLNL N +V WW+ Q +R + G Sbjct: 830 RFQGDDGPPVMLLSLKAGGTGLNLT-AANHVVHLDRWWNPAVENQATDR-----AFRIGQ 883 Query: 162 KRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 +R V V L+ T++E + + K + DL + Sbjct: 884 RRDVQVRKLVCVGTLEERIDAMISNKQELADLAI 917 >gi|241958618|ref|XP_002422028.1| DNA helicase, putative [Candida dubliniensis CD36] gi|223645373|emb|CAX40029.1| DNA helicase, putative [Candida dubliniensis CD36] Length = 1366 Score = 106 bits (264), Expect = 2e-21, Method: Composition-based stats. Identities = 29/156 (18%), Positives = 64/156 (41%), Gaps = 19/156 (12%) Query: 53 DEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQK----------AFPQGRTLDKDPCT 100 K+ L+ ++ I++ + + ++ T++ Sbjct: 1214 SGKLAKLDELLVDLKQGGHRILIYFQMTRMMQIFEEYLAYKSYKYIRLDGSTTIESRREM 1273 Query: 101 IQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQA 159 +Q W +I + + G GLNL + ++F+ W+ Q ++R + Sbjct: 1274 VQAWQTNPEIFIFMLSTRAGGLGLNLT-SADTVIFYDSDWNPTIDSQAMDR-----AHRI 1327 Query: 160 GFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 G + V V+ L+ +NTI++ +L+R + K IQ L++ Sbjct: 1328 GQTKQVKVFRLVTRNTIEQKILERAKEKEEIQKLVV 1363 >gi|308807292|ref|XP_003080957.1| DNA repair protein RAD54-like (ISS) [Ostreococcus tauri] gi|116059418|emb|CAL55125.1| DNA repair protein RAD54-like (ISS) [Ostreococcus tauri] Length = 816 Score = 106 bits (264), Expect = 2e-21, Method: Composition-based stats. Identities = 36/160 (22%), Positives = 66/160 (41%), Gaps = 21/160 (13%) Query: 50 EVHDEKIKALEVIIE---KANAAPIIVAYHFNSDLARLQK----------AFPQGRTLDK 96 E H K L ++ I++ ++ L + + G T+ K Sbjct: 539 EEHSGKFAVLARLLANLRSETKDRIVIISNYTQTLDLIAQMCIERHYPFVRLDGGTTIGK 598 Query: 97 DPCTIQEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 ++E+N+ + + G G+NL GGN LV F W+ +Q R Sbjct: 599 RQKLVKEFNDPTSNSFVFLLSSKAGGCGINL-IGGNRLVLFDPDWNPANDKQAAARCW-- 655 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 + G K+ ++Y +A TI+E V QR +K ++Q+++ Sbjct: 656 ---RDGQKKKCYLYRFLAAGTIEEKVFQRQLSKESLQNVV 692 >gi|297739163|emb|CBI28814.3| unnamed protein product [Vitis vinifera] Length = 964 Score = 106 bits (264), Expect = 2e-21, Method: Composition-based stats. Identities = 29/161 (18%), Positives = 56/161 (34%), Gaps = 21/161 (13%) Query: 52 HDEKIKALEV----IIEKANAAPIIVAYHFNSDLARLQKAFPQGRTL-----------DK 96 KI AL ++E+ +A IV F S L + + + + Sbjct: 791 TSTKIDALREEIRFMVERDGSAKGIVFSQFTSFLDLINYSLQKSGITCVQLVGSMSMAAR 850 Query: 97 DPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 D + NE + + G LNL + + WW+ +ER R Sbjct: 851 DAAISRFTNEPDCKIFLMSLKAGGVALNLTVASH-VFLMDPWWN-----PAVERQAQDRI 904 Query: 157 RQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + G + + + + + TI+E +L+ K + + + Sbjct: 905 HRIGQYKPIRIVRFVIEKTIEERILKLQEKKELVFEGTVGG 945 >gi|225447045|ref|XP_002269303.1| PREDICTED: similar to SNF2 domain-containing protein / helicase domain-containing protein / RING finger domain-containing protein [Vitis vinifera] Length = 989 Score = 106 bits (264), Expect = 2e-21, Method: Composition-based stats. Identities = 29/161 (18%), Positives = 56/161 (34%), Gaps = 21/161 (13%) Query: 52 HDEKIKALEV----IIEKANAAPIIVAYHFNSDLARLQKAFPQGRTL-----------DK 96 KI AL ++E+ +A IV F S L + + + + Sbjct: 816 TSTKIDALREEIRFMVERDGSAKGIVFSQFTSFLDLINYSLQKSGITCVQLVGSMSMAAR 875 Query: 97 DPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 D + NE + + G LNL + + WW+ +ER R Sbjct: 876 DAAISRFTNEPDCKIFLMSLKAGGVALNLTVASH-VFLMDPWWN-----PAVERQAQDRI 929 Query: 157 RQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + G + + + + + TI+E +L+ K + + + Sbjct: 930 HRIGQYKPIRIVRFVIEKTIEERILKLQEKKELVFEGTVGG 970 >gi|166240632|ref|XP_001732968.1| SNF2-related domain-containing protein [Dictyostelium discoideum AX4] gi|165988704|gb|EDR41103.1| SNF2-related domain-containing protein [Dictyostelium discoideum AX4] Length = 1838 Score = 106 bits (264), Expect = 2e-21, Method: Composition-based stats. Identities = 33/162 (20%), Positives = 65/162 (40%), Gaps = 17/162 (10%) Query: 53 DEKIKALEVIIEKANAAPIIVAYHFNSDLARLQK-----AFPQGRTLDKDPC-----TIQ 102 D + L + + + ++ + S L L+ F R K P I+ Sbjct: 1673 DSLLDELNKVFKNEPDSKCLIFSQWTSMLDLLEYPLNLNQFQFVRLDGKIPQKQREVAIK 1732 Query: 103 EW-NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGF 161 + E + + + G GLNL + + WW+ +Q I+R+ + G Sbjct: 1733 RFKEEPNVKIFLISIKAGGLGLNL-VAASHVFLMDPWWNPSTEEQAIDRV-----YRIGQ 1786 Query: 162 KRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETI 203 + V V + +++I+E +L ++K + LN +KK+T Sbjct: 1787 NKNVNVIRFLIKDSIEERILNLQKSKKDLAKEALNTMKKQTR 1828 >gi|146420507|ref|XP_001486209.1| hypothetical protein PGUG_01880 [Meyerozyma guilliermondii ATCC 6260] Length = 952 Score = 106 bits (264), Expect = 2e-21, Method: Composition-based stats. Identities = 25/158 (15%), Positives = 63/158 (39%), Gaps = 19/158 (12%) Query: 53 DEKIKALEVIIEKANA--APIIVAYHFNSDLARLQK----------AFPQGRTLDKDPCT 100 K+ L+ ++ +++ + + +++ L+ Sbjct: 734 SGKLARLDQLLVDLKGDDHRVLIYFQMTKMMDLMEEYLTYRQHRYIRLDGSSKLEDRRDL 793 Query: 101 IQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQA 159 + +W + +I + + G G+NL + ++F+ W+ Q ++R + Sbjct: 794 VHDWQTKPEIFVFLLSTRAGGLGINLT-AADTVIFYDSDWNPTIDSQAMDR-----AHRL 847 Query: 160 GFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 G + V VY L+A+ TI+E + R + K +Q +++ Sbjct: 848 GQTKQVTVYRLLARGTIEERMRNRAKQKEQVQQVVMEG 885 >gi|149411093|ref|XP_001509678.1| PREDICTED: similar to SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1 [Ornithorhynchus anatinus] Length = 1143 Score = 106 bits (264), Expect = 2e-21, Method: Composition-based stats. Identities = 44/230 (19%), Positives = 90/230 (39%), Gaps = 40/230 (17%) Query: 1 MKQY---HKFQRELYCDLQGENIEAFNSASKTVK------CLQL---ANGAVYYD----- 43 +K Y K QRE Y + ++I+ NSA K K +QL N +D Sbjct: 499 VKIYLGLSKMQREWYTRILMKDIDILNSAGKMDKMRLLNILMQLRKCCNHPYLFDGAEPG 558 Query: 44 ---EEKHWKEVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQ---------KAFP 89 + K+ AL+ ++ K + +++ L L+ Sbjct: 559 PPYTTDTHLVNNSGKMVALDKLLSKLKEQGSRVLIFSQMTRLLDILEDYCMWRGYEYCRL 618 Query: 90 QGRTL-DKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 G+T ++ I +N + + G G+NL ++++ + W+ + Q Sbjct: 619 DGQTPHEEREEAIDTFNAPNSSKFIFMLSTRAGGLGINL-ATADVVILYDSDWNPQVDLQ 677 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 ++R + G K+ V V+ LI NT+++ +++R K + +++ Sbjct: 678 AMDR-----AHRIGQKKPVRVFRLITDNTVEDRIVERAEIKLRLDSIVIQ 722 >gi|225419973|ref|ZP_03762276.1| hypothetical protein CLOSTASPAR_06314 [Clostridium asparagiforme DSM 15981] gi|225041395|gb|EEG51641.1| hypothetical protein CLOSTASPAR_06314 [Clostridium asparagiforme DSM 15981] Length = 421 Score = 106 bits (264), Expect = 2e-21, Method: Composition-based stats. Identities = 43/198 (21%), Positives = 81/198 (40%), Gaps = 23/198 (11%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEV 61 K+Y KF R+ + G SK + + + Y ++ + A + Sbjct: 234 KEYRKFMRDAIITIDGREYIGDTILSKRIYARMMCS---YLNKGRVA---------AFKD 281 Query: 62 IIEKANAAPIIVAYHFNSDLARLQKAFPQGR----TLDKDPCTIQEWNEGKIPLLFAHPA 117 +++ +IV Y+FN +L +Q+A + ++ + + E + F Sbjct: 282 LVQSTEER-LIVFYNFNEELNTMQEAIAELERPISIVNGSFKDLTAYEEASDSITFVQYQ 340 Query: 118 SCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 + GLNLQ N +++FS+ E +Q +RI + G K+ F Y +I T++ Sbjct: 341 AGAMGLNLQK-ANRIIYFSMTDRSELFEQSKKRI-----HRIGQKKPCFYYQMICPGTVE 394 Query: 178 ELVLQRLRTKSTIQDLLL 195 E +L L + D L Sbjct: 395 EDILHTLELRKDYTDELF 412 >gi|196014269|ref|XP_002116994.1| hypothetical protein TRIADDRAFT_60972 [Trichoplax adhaerens] gi|190580485|gb|EDV20568.1| hypothetical protein TRIADDRAFT_60972 [Trichoplax adhaerens] Length = 1002 Score = 106 bits (264), Expect = 3e-21, Method: Composition-based stats. Identities = 49/230 (21%), Positives = 88/230 (38%), Gaps = 40/230 (17%) Query: 1 MKQY---HKFQRELYCDLQGENIEAFNSASKTVK------CLQL---ANGAVYYD--EEK 46 +K Y + QRE Y + ++I+ N A KT K +QL N +D E Sbjct: 354 VKVYVGLSRMQREWYTKILMKDIDIVNGAGKTDKMRLLNILMQLRKCCNHPYLFDGAEPG 413 Query: 47 HWKEVHDE------KIKALEVIIE--KANAAPIIVAYHFNSDLARL---------QKAFP 89 K+ LE ++ +A + ++V L L + Sbjct: 414 PPYTTDTHLATNCGKMVVLEKLLPRLQAQGSRVLVFSQMTRMLDILEDYCMWKGYKYCRL 473 Query: 90 QGRTLDKDPCT-IQEWN--EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 G T +D IQ +N + L + G G+NL ++++ + W+ + Q Sbjct: 474 DGSTPHEDRQASIQAFNMPDSDKFLFMLSTRAGGLGINL-ATADVVILYDSDWNPQVDLQ 532 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 R + G + V V+ I NTI+E +++R TK + +++ Sbjct: 533 A-----QDRAHRIGQTKEVKVFRFITDNTIEERIVERAETKLRLDRIVIQ 577 >gi|311251314|ref|XP_003124552.1| PREDICTED: LOW QUALITY PROTEIN: helicase SRCAP-like [Sus scrofa] Length = 3227 Score = 106 bits (264), Expect = 3e-21, Method: Composition-based stats. Identities = 33/156 (21%), Positives = 65/156 (41%), Gaps = 19/156 (12%) Query: 55 KIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAF---------PQGRTLDKDPCTI-Q 102 K++ L V++ + A +++ L L++ G T + + + Sbjct: 2040 KLQTLAVLLRQLKAEGHRVLIFTQMTRMLDVLEQFLTYHGHLYLRLDGSTRVEQRQALME 2099 Query: 103 EWNEGK-IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGF 161 +N K I S G G+NL G + +VF+ W+ Q +R + G Sbjct: 2100 RFNADKRIFCFILSTRSGGVGVNLT-GADTVVFYDSDWNPTMDAQAQDRC-----HRIGQ 2153 Query: 162 KRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 R V +Y LI++ T++E +L++ K + D+ + Sbjct: 2154 TRDVHIYRLISERTVEENILKKANQKRMLGDMAIEG 2189 >gi|309268993|ref|XP_003084784.1| PREDICTED: helicase SRCAP [Mus musculus] gi|309268995|ref|XP_001480453.2| PREDICTED: helicase SRCAP isoform 1 [Mus musculus] Length = 3237 Score = 106 bits (264), Expect = 3e-21, Method: Composition-based stats. Identities = 33/156 (21%), Positives = 65/156 (41%), Gaps = 19/156 (12%) Query: 55 KIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAF---------PQGRTLDKDPCTI-Q 102 K++ L V++ + A +++ L L++ G T + + + Sbjct: 2044 KLQTLAVLLRQLKAEGHRVLIFTQMTRMLDVLEQFLTYHGHLYLRLDGSTRVEQRQALME 2103 Query: 103 EWNEGK-IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGF 161 +N K I S G G+NL G + +VF+ W+ Q +R + G Sbjct: 2104 RFNADKRIFCFILSTRSGGVGVNLT-GADTVVFYDSDWNPTMDAQAQDRC-----HRIGQ 2157 Query: 162 KRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 R V +Y LI++ T++E +L++ K + D+ + Sbjct: 2158 TRDVHIYRLISERTVEENILKKANQKRMLGDMAIEG 2193 >gi|309266116|ref|XP_003086692.1| PREDICTED: LOW QUALITY PROTEIN: helicase SRCAP [Mus musculus] Length = 3231 Score = 106 bits (264), Expect = 3e-21, Method: Composition-based stats. Identities = 33/156 (21%), Positives = 65/156 (41%), Gaps = 19/156 (12%) Query: 55 KIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAF---------PQGRTLDKDPCTI-Q 102 K++ L V++ + A +++ L L++ G T + + + Sbjct: 2044 KLQTLAVLLRQLKAEGHRVLIFTQMTRMLDVLEQFLTYHGHLYLRLDGSTRVEQRQALME 2103 Query: 103 EWNEGK-IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGF 161 +N K I S G G+NL G + +VF+ W+ Q +R + G Sbjct: 2104 RFNADKRIFCFILSTRSGGVGVNLT-GADTVVFYDSDWNPTMDAQAQDRC-----HRIGQ 2157 Query: 162 KRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 R V +Y LI++ T++E +L++ K + D+ + Sbjct: 2158 TRDVHIYRLISERTVEENILKKANQKRMLGDMAIEG 2193 >gi|301778809|ref|XP_002924810.1| PREDICTED: helicase SRCAP-like [Ailuropoda melanoleuca] Length = 3243 Score = 106 bits (264), Expect = 3e-21, Method: Composition-based stats. Identities = 33/156 (21%), Positives = 65/156 (41%), Gaps = 19/156 (12%) Query: 55 KIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAF---------PQGRTLDKDPCTI-Q 102 K++ L V++ + A +++ L L++ G T + + + Sbjct: 2055 KLQTLAVLLRQLKAEGHRVLIFTQMTRMLDVLEQFLTYHGHLYLRLDGSTRVEQRQALME 2114 Query: 103 EWNEGK-IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGF 161 +N K I S G G+NL G + +VF+ W+ Q +R + G Sbjct: 2115 RFNADKRIFCFILSTRSGGVGVNLT-GADTVVFYDSDWNPTMDAQAQDRC-----HRIGQ 2168 Query: 162 KRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 R V +Y LI++ T++E +L++ K + D+ + Sbjct: 2169 TRDVHIYRLISERTVEENILKKANQKRMLGDMAIEG 2204 >gi|297698573|ref|XP_002826392.1| PREDICTED: LOW QUALITY PROTEIN: helicase SRCAP-like [Pongo abelii] Length = 3230 Score = 106 bits (264), Expect = 3e-21, Method: Composition-based stats. Identities = 33/156 (21%), Positives = 65/156 (41%), Gaps = 19/156 (12%) Query: 55 KIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAF---------PQGRTLDKDPCTI-Q 102 K++ L V++ + A +++ L L++ G T + + + Sbjct: 2044 KLQTLAVLLRQLKAEGHRVLIFTQMTRMLDVLEQFLTYHGHLYLRLDGSTRVEQRQALME 2103 Query: 103 EWNEGK-IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGF 161 +N K I S G G+NL G + +VF+ W+ Q +R + G Sbjct: 2104 RFNADKRIFCFILSTRSGGVGVNLT-GADTVVFYDSDWNPTMDAQAQDRC-----HRIGQ 2157 Query: 162 KRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 R V +Y LI++ T++E +L++ K + D+ + Sbjct: 2158 TRDVHIYRLISERTVEENILKKANQKRMLGDMAIEG 2193 >gi|297283843|ref|XP_002802498.1| PREDICTED: helicase SRCAP-like [Macaca mulatta] Length = 3071 Score = 106 bits (264), Expect = 3e-21, Method: Composition-based stats. Identities = 33/156 (21%), Positives = 65/156 (41%), Gaps = 19/156 (12%) Query: 55 KIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAF---------PQGRTLDKDPCTI-Q 102 K++ L V++ + A +++ L L++ G T + + + Sbjct: 2000 KLQTLAVLLRQLKAEGHRVLIFTQMTRMLDVLEQFLTYHGHLYLRLDGSTRVEQRQALME 2059 Query: 103 EWNEGK-IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGF 161 +N K I S G G+NL G + +VF+ W+ Q +R + G Sbjct: 2060 RFNADKRIFCFILSTRSGGVGVNLT-GADTVVFYDSDWNPTMDAQAQDRC-----HRIGQ 2113 Query: 162 KRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 R V +Y LI++ T++E +L++ K + D+ + Sbjct: 2114 TRDVHIYRLISERTVEENILKKANQKRMLGDMAIEG 2149 >gi|293356219|ref|XP_341933.4| PREDICTED: Snf2-related CBP activator protein [Rattus norvegicus] Length = 3198 Score = 106 bits (264), Expect = 3e-21, Method: Composition-based stats. Identities = 33/156 (21%), Positives = 65/156 (41%), Gaps = 19/156 (12%) Query: 55 KIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAF---------PQGRTLDKDPCTI-Q 102 K++ L V++ + A +++ L L++ G T + + + Sbjct: 2021 KLQTLAVLLRQLKAEGHRVLIFTQMTRMLDVLEQFLTYHGHLYLRLDGSTRVEQRQALME 2080 Query: 103 EWNEGK-IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGF 161 +N K I S G G+NL G + +VF+ W+ Q +R + G Sbjct: 2081 RFNADKRIFCFILSTRSGGVGVNLT-GADTVVFYDSDWNPTMDAQAQDRC-----HRIGQ 2134 Query: 162 KRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 R V +Y LI++ T++E +L++ K + D+ + Sbjct: 2135 TRDVHIYRLISERTVEENILKKANQKRMLGDMAIEG 2170 >gi|293344407|ref|XP_001080260.2| PREDICTED: SWI/SNF-related matrix-associated actin-dependent regulator of chromatin a5-like [Rattus norvegicus] Length = 3212 Score = 106 bits (264), Expect = 3e-21, Method: Composition-based stats. Identities = 33/156 (21%), Positives = 65/156 (41%), Gaps = 19/156 (12%) Query: 55 KIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAF---------PQGRTLDKDPCTI-Q 102 K++ L V++ + A +++ L L++ G T + + + Sbjct: 2035 KLQTLAVLLRQLKAEGHRVLIFTQMTRMLDVLEQFLTYHGHLYLRLDGSTRVEQRQALME 2094 Query: 103 EWNEGK-IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGF 161 +N K I S G G+NL G + +VF+ W+ Q +R + G Sbjct: 2095 RFNADKRIFCFILSTRSGGVGVNLT-GADTVVFYDSDWNPTMDAQAQDRC-----HRIGQ 2148 Query: 162 KRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 R V +Y LI++ T++E +L++ K + D+ + Sbjct: 2149 TRDVHIYRLISERTVEENILKKANQKRMLGDMAIEG 2184 >gi|291411041|ref|XP_002721806.1| PREDICTED: Snf2-related CBP activator protein [Oryctolagus cuniculus] Length = 3217 Score = 106 bits (264), Expect = 3e-21, Method: Composition-based stats. Identities = 33/156 (21%), Positives = 65/156 (41%), Gaps = 19/156 (12%) Query: 55 KIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAF---------PQGRTLDKDPCTI-Q 102 K++ L V++ + A +++ L L++ G T + + + Sbjct: 2028 KLQTLAVLLRQLKAEGHRVLIFTQMTRMLDVLEQFLTYHGHLYLRLDGSTRVEQRQALME 2087 Query: 103 EWNEGK-IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGF 161 +N K I S G G+NL G + +VF+ W+ Q +R + G Sbjct: 2088 RFNADKRIFCFILSTRSGGVGVNLT-GADTVVFYDSDWNPTMDAQAQDRC-----HRIGQ 2141 Query: 162 KRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 R V +Y LI++ T++E +L++ K + D+ + Sbjct: 2142 TRDVHIYRLISERTVEENILKKANQKRMLGDMAIEG 2177 >gi|281352714|gb|EFB28298.1| hypothetical protein PANDA_014226 [Ailuropoda melanoleuca] Length = 3225 Score = 106 bits (264), Expect = 3e-21, Method: Composition-based stats. Identities = 33/156 (21%), Positives = 65/156 (41%), Gaps = 19/156 (12%) Query: 55 KIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAF---------PQGRTLDKDPCTI-Q 102 K++ L V++ + A +++ L L++ G T + + + Sbjct: 2037 KLQTLAVLLRQLKAEGHRVLIFTQMTRMLDVLEQFLTYHGHLYLRLDGSTRVEQRQALME 2096 Query: 103 EWNEGK-IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGF 161 +N K I S G G+NL G + +VF+ W+ Q +R + G Sbjct: 2097 RFNADKRIFCFILSTRSGGVGVNLT-GADTVVFYDSDWNPTMDAQAQDRC-----HRIGQ 2150 Query: 162 KRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 R V +Y LI++ T++E +L++ K + D+ + Sbjct: 2151 TRDVHIYRLISERTVEENILKKANQKRMLGDMAIEG 2186 >gi|194219024|ref|XP_001501219.2| PREDICTED: similar to Snf2-related CBP activator protein [Equus caballus] Length = 3228 Score = 106 bits (264), Expect = 3e-21, Method: Composition-based stats. Identities = 33/156 (21%), Positives = 65/156 (41%), Gaps = 19/156 (12%) Query: 55 KIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAF---------PQGRTLDKDPCTI-Q 102 K++ L V++ + A +++ L L++ G T + + + Sbjct: 2052 KLQTLAVLLRQLKAEGHRVLIFTQMTRMLDVLEQFLTYHGHLYLRLDGSTRVEQRQALME 2111 Query: 103 EWNEGK-IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGF 161 +N K I S G G+NL G + +VF+ W+ Q +R + G Sbjct: 2112 RFNADKRIFCFILSTRSGGVGVNLT-GADTVVFYDSDWNPTMDAQAQDRC-----HRIGQ 2165 Query: 162 KRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 R V +Y LI++ T++E +L++ K + D+ + Sbjct: 2166 TRDVHIYRLISERTVEENILKKANQKRMLGDMAIEG 2201 >gi|166796215|gb|AAI59100.1| SRCAP protein [Homo sapiens] gi|168272948|dbj|BAG10313.1| Snf2-related CBP activator protein [synthetic construct] Length = 3049 Score = 106 bits (264), Expect = 3e-21, Method: Composition-based stats. Identities = 33/156 (21%), Positives = 65/156 (41%), Gaps = 19/156 (12%) Query: 55 KIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAF---------PQGRTLDKDPCTI-Q 102 K++ L V++ + A +++ L L++ G T + + + Sbjct: 1863 KLQTLAVLLRQLKAEGHRVLIFTQMTRMLDVLEQFLTYHGHLYLRLDGSTRVEQRQALME 1922 Query: 103 EWNEGK-IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGF 161 +N K I S G G+NL G + +VF+ W+ Q +R + G Sbjct: 1923 RFNADKRIFCFILSTRSGGVGVNLT-GADTVVFYDSDWNPTMDAQAQDRC-----HRIGQ 1976 Query: 162 KRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 R V +Y LI++ T++E +L++ K + D+ + Sbjct: 1977 TRDVHIYRLISERTVEENILKKANQKRMLGDMAIEG 2012 >gi|149067720|gb|EDM17272.1| rCG39385, isoform CRA_a [Rattus norvegicus] Length = 1594 Score = 106 bits (264), Expect = 3e-21, Method: Composition-based stats. Identities = 33/156 (21%), Positives = 65/156 (41%), Gaps = 19/156 (12%) Query: 55 KIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAF---------PQGRTLDKDPCTI-Q 102 K++ L V++ + A +++ L L++ G T + + + Sbjct: 569 KLQTLAVLLRQLKAEGHRVLIFTQMTRMLDVLEQFLTYHGHLYLRLDGSTRVEQRQALME 628 Query: 103 EWNEGK-IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGF 161 +N K I S G G+NL G + +VF+ W+ Q +R + G Sbjct: 629 RFNADKRIFCFILSTRSGGVGVNLT-GADTVVFYDSDWNPTMDAQAQDRC-----HRIGQ 682 Query: 162 KRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 R V +Y LI++ T++E +L++ K + D+ + Sbjct: 683 TRDVHIYRLISERTVEENILKKANQKRMLGDMAIEG 718 >gi|148685599|gb|EDL17546.1| mCG142078, isoform CRA_a [Mus musculus] Length = 2617 Score = 106 bits (264), Expect = 3e-21, Method: Composition-based stats. Identities = 33/156 (21%), Positives = 65/156 (41%), Gaps = 19/156 (12%) Query: 55 KIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAF---------PQGRTLDKDPCTI-Q 102 K++ L V++ + A +++ L L++ G T + + + Sbjct: 1587 KLQTLAVLLRQLKAEGHRVLIFTQMTRMLDVLEQFLTYHGHLYLRLDGSTRVEQRQALME 1646 Query: 103 EWNEGK-IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGF 161 +N K I S G G+NL G + +VF+ W+ Q +R + G Sbjct: 1647 RFNADKRIFCFILSTRSGGVGVNLT-GADTVVFYDSDWNPTMDAQAQDRC-----HRIGQ 1700 Query: 162 KRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 R V +Y LI++ T++E +L++ K + D+ + Sbjct: 1701 TRDVHIYRLISERTVEENILKKANQKRMLGDMAIEG 1736 >gi|146219843|ref|NP_006653.2| helicase SRCAP [Homo sapiens] gi|296452947|sp|Q6ZRS2|SRCAP_HUMAN RecName: Full=Helicase SRCAP; AltName: Full=Domino homolog 2; AltName: Full=Snf2-related CBP activator gi|225000510|gb|AAI72428.1| Snf2-related CREBBP activator protein [synthetic construct] Length = 3230 Score = 106 bits (264), Expect = 3e-21, Method: Composition-based stats. Identities = 33/156 (21%), Positives = 65/156 (41%), Gaps = 19/156 (12%) Query: 55 KIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAF---------PQGRTLDKDPCTI-Q 102 K++ L V++ + A +++ L L++ G T + + + Sbjct: 2044 KLQTLAVLLRQLKAEGHRVLIFTQMTRMLDVLEQFLTYHGHLYLRLDGSTRVEQRQALME 2103 Query: 103 EWNEGK-IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGF 161 +N K I S G G+NL G + +VF+ W+ Q +R + G Sbjct: 2104 RFNADKRIFCFILSTRSGGVGVNLT-GADTVVFYDSDWNPTMDAQAQDRC-----HRIGQ 2157 Query: 162 KRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 R V +Y LI++ T++E +L++ K + D+ + Sbjct: 2158 TRDVHIYRLISERTVEENILKKANQKRMLGDMAIEG 2193 >gi|119572598|gb|EAW52213.1| Snf2-related CBP activator protein, isoform CRA_b [Homo sapiens] Length = 3168 Score = 106 bits (264), Expect = 3e-21, Method: Composition-based stats. Identities = 33/156 (21%), Positives = 65/156 (41%), Gaps = 19/156 (12%) Query: 55 KIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAF---------PQGRTLDKDPCTI-Q 102 K++ L V++ + A +++ L L++ G T + + + Sbjct: 1982 KLQTLAVLLRQLKAEGHRVLIFTQMTRMLDVLEQFLTYHGHLYLRLDGSTRVEQRQALME 2041 Query: 103 EWNEGK-IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGF 161 +N K I S G G+NL G + +VF+ W+ Q +R + G Sbjct: 2042 RFNADKRIFCFILSTRSGGVGVNLT-GADTVVFYDSDWNPTMDAQAQDRC-----HRIGQ 2095 Query: 162 KRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 R V +Y LI++ T++E +L++ K + D+ + Sbjct: 2096 TRDVHIYRLISERTVEENILKKANQKRMLGDMAIEG 2131 >gi|119572599|gb|EAW52214.1| Snf2-related CBP activator protein, isoform CRA_c [Homo sapiens] Length = 3131 Score = 106 bits (264), Expect = 3e-21, Method: Composition-based stats. Identities = 33/156 (21%), Positives = 65/156 (41%), Gaps = 19/156 (12%) Query: 55 KIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAF---------PQGRTLDKDPCTI-Q 102 K++ L V++ + A +++ L L++ G T + + + Sbjct: 1945 KLQTLAVLLRQLKAEGHRVLIFTQMTRMLDVLEQFLTYHGHLYLRLDGSTRVEQRQALME 2004 Query: 103 EWNEGK-IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGF 161 +N K I S G G+NL G + +VF+ W+ Q +R + G Sbjct: 2005 RFNADKRIFCFILSTRSGGVGVNLT-GADTVVFYDSDWNPTMDAQAQDRC-----HRIGQ 2058 Query: 162 KRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 R V +Y LI++ T++E +L++ K + D+ + Sbjct: 2059 TRDVHIYRLISERTVEENILKKANQKRMLGDMAIEG 2094 >gi|34535199|dbj|BAC87237.1| unnamed protein product [Homo sapiens] Length = 2427 Score = 106 bits (264), Expect = 3e-21, Method: Composition-based stats. Identities = 33/156 (21%), Positives = 65/156 (41%), Gaps = 19/156 (12%) Query: 55 KIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAF---------PQGRTLDKDPCTI-Q 102 K++ L V++ + A +++ L L++ G T + + + Sbjct: 2044 KLQTLAVLLRQLKAEGHRVLIFTQMTRMLDVLEQFLTYHGHLYLRLDGSTRVEQRQALME 2103 Query: 103 EWNEGK-IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGF 161 +N K I S G G+NL G + +VF+ W+ Q +R + G Sbjct: 2104 RFNADKRIFCFILSTRSGGVGVNLT-GADTVVFYDSDWNPTMDAQAQDRC-----HRIGQ 2157 Query: 162 KRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 R V +Y LI++ T++E +L++ K + D+ + Sbjct: 2158 TRDVHIYRLISERTVEENILKKANQKRMLGDMAIEG 2193 >gi|73958382|ref|XP_536900.2| PREDICTED: similar to Snf2-related CBP activator protein [Canis familiaris] Length = 3104 Score = 106 bits (264), Expect = 3e-21, Method: Composition-based stats. Identities = 33/156 (21%), Positives = 65/156 (41%), Gaps = 19/156 (12%) Query: 55 KIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAF---------PQGRTLDKDPCTI-Q 102 K++ L V++ + A +++ L L++ G T + + + Sbjct: 1921 KLQTLAVLLRQLKAEGHRVLIFTQMTRMLDVLEQFLTYHGHLYLRLDGSTRVEQRQALME 1980 Query: 103 EWNEGK-IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGF 161 +N K I S G G+NL G + +VF+ W+ Q +R + G Sbjct: 1981 RFNADKRIFCFILSTRSGGVGVNLT-GADTVVFYDSDWNPTMDAQAQDRC-----HRIGQ 2034 Query: 162 KRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 R V +Y LI++ T++E +L++ K + D+ + Sbjct: 2035 TRDVHIYRLISERTVEENILKKANQKRMLGDMAIEG 2070 >gi|5106572|gb|AAD39760.1|AF143946_1 transcriptional activator SRCAP [Homo sapiens] Length = 2971 Score = 106 bits (264), Expect = 3e-21, Method: Composition-based stats. Identities = 33/156 (21%), Positives = 65/156 (41%), Gaps = 19/156 (12%) Query: 55 KIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAF---------PQGRTLDKDPCTI-Q 102 K++ L V++ + A +++ L L++ G T + + + Sbjct: 1785 KLQTLAVLLRQLKAEGHRVLIFTQMTRMLDVLEQFLTYHGHLYLRLDGSTRVEQRQALME 1844 Query: 103 EWNEGK-IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGF 161 +N K I S G G+NL G + +VF+ W+ Q +R + G Sbjct: 1845 RFNADKRIFCFILSTRSGGVGVNLT-GADTVVFYDSDWNPTMDAQAQDRC-----HRIGQ 1898 Query: 162 KRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 R V +Y LI++ T++E +L++ K + D+ + Sbjct: 1899 TRDVHIYRLISERTVEENILKKANQKRMLGDMAIEG 1934 >gi|34327954|dbj|BAA20768.2| KIAA0309 [Homo sapiens] Length = 3053 Score = 106 bits (264), Expect = 3e-21, Method: Composition-based stats. Identities = 33/156 (21%), Positives = 65/156 (41%), Gaps = 19/156 (12%) Query: 55 KIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAF---------PQGRTLDKDPCTI-Q 102 K++ L V++ + A +++ L L++ G T + + + Sbjct: 1867 KLQTLAVLLRQLKAEGHRVLIFTQMTRMLDVLEQFLTYHGHLYLRLDGSTRVEQRQALME 1926 Query: 103 EWNEGK-IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGF 161 +N K I S G G+NL G + +VF+ W+ Q +R + G Sbjct: 1927 RFNADKRIFCFILSTRSGGVGVNLT-GADTVVFYDSDWNPTMDAQAQDRC-----HRIGQ 1980 Query: 162 KRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 R V +Y LI++ T++E +L++ K + D+ + Sbjct: 1981 TRDVHIYRLISERTVEENILKKANQKRMLGDMAIEG 2016 >gi|111018558|ref|YP_701530.1| helicase [Rhodococcus jostii RHA1] gi|110818088|gb|ABG93372.1| probable helicase [Rhodococcus jostii RHA1] Length = 961 Score = 106 bits (264), Expect = 3e-21, Method: Composition-based stats. Identities = 35/212 (16%), Positives = 71/212 (33%), Gaps = 26/212 (12%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASK--TVKCLQLANGAVYYDEEKHWK----EVHDEK 55 Y ++ ++ + A K Q+ N ++ + + K Sbjct: 726 ALYRAVVDDMMAQIKDKKGMKRKGAVLAALTKLKQVCNHPAHFLRDGSAVMRRGQHRSGK 785 Query: 56 IKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQ-----------GRTLDKDPCTIQ 102 + +E I++ A+ ++ F + + G + K + Sbjct: 786 LGLVEDILDSVVADGEKALLFTQFREFGDLVTPYLAERFGTPVPFLHGGVSKQKRDDMVA 845 Query: 103 EWNEGK-IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGF 161 + P++ + G GLNL N +V WW+ Q +R + G Sbjct: 846 SFQGDDGPPIMMLSLKAGGTGLNLT-AANHVVHLDRWWNPAVENQATDR-----AFRIGQ 899 Query: 162 KRAVFVYYLIAQNTIDELVLQRLRTKSTIQDL 193 +R V V L+ T++E + + TK + DL Sbjct: 900 RRDVQVRKLVCVGTLEERIDAMIATKQELADL 931 >gi|328857391|gb|EGG06508.1| hypothetical protein MELLADRAFT_36161 [Melampsora larici-populina 98AG31] Length = 824 Score = 106 bits (264), Expect = 3e-21, Method: Composition-based stats. Identities = 38/193 (19%), Positives = 72/193 (37%), Gaps = 30/193 (15%) Query: 13 CDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEV----IIEKANA 68 DL E I+ +S+ K Q G + + W+ KI+AL + ++ ++ Sbjct: 621 IDLSQEAIDEESSS----KARQ---GVLARLDPGKWR--TSTKIEALVEELSKLNKEDHS 671 Query: 69 APIIVAYHFNSDLARLQKA-----FPQGRTLD------KDPCTIQEWNEGKIPLLFAHPA 117 +V F L +++ F R +D N + + Sbjct: 672 IKSLVFSQFTVFLDLIERRLQLAGFKLARLQGHMTPEARDRTIKHFMNNNDVQVFLVSLK 731 Query: 118 SCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 + G LNL + + WW+ Q ++RI + G R V V LI +N+I+ Sbjct: 732 AGGVALNLTEASRVFIM-DPWWNPAVELQAMDRI-----HRLGQHRPVVVTRLIIENSIE 785 Query: 178 ELVLQRLRTKSTI 190 +++ + K + Sbjct: 786 SRIVELQKKKEAM 798 >gi|301776436|ref|XP_002923633.1| PREDICTED: transcription termination factor 2-like [Ailuropoda melanoleuca] gi|281337997|gb|EFB13581.1| hypothetical protein PANDA_012813 [Ailuropoda melanoleuca] Length = 1157 Score = 105 bits (263), Expect = 3e-21, Method: Composition-based stats. Identities = 38/175 (21%), Positives = 70/175 (40%), Gaps = 21/175 (12%) Query: 44 EEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLA----RLQKAFPQGRTLDKDPC 99 E + LE I + + +V + S L L++ T+D Sbjct: 980 ENTRVSSKISSLLVELEAIRGNSASQKSVVVSQWTSMLQVVAWHLKRHGLTFATIDGSVN 1039 Query: 100 T------IQEWNEGKIP-LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIG 152 ++ +N + P ++ ++ G GLNL GGN L + W+ Q +RI Sbjct: 1040 PKQRMDLVEAFNSSRGPQVMLISLSAGGVGLNLT-GGNHLFLLDMHWNPSLEDQACDRI- 1097 Query: 153 VTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL----NALKKETI 203 + G ++ V V+ I + T++E +L K T+ +L ++KK T+ Sbjct: 1098 ----YRVGQQKDVVVHKFICEGTVEEKILHLQEKKKTLAKQVLSGSGESVKKLTL 1148 >gi|294658308|ref|XP_002770756.1| DEHA2F06446p [Debaryomyces hansenii CBS767] gi|202953033|emb|CAR66284.1| DEHA2F06446p [Debaryomyces hansenii] Length = 884 Score = 105 bits (263), Expect = 3e-21, Method: Composition-based stats. Identities = 40/190 (21%), Positives = 69/190 (36%), Gaps = 18/190 (9%) Query: 7 FQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKA 66 + E + + ++SK + L ++ + + + LE I+ K Sbjct: 572 IENEHDSTIDLTTLSKKTASSKVNILIPLLIEINQIGDKTVLISNYTQTLDLLETILHKL 631 Query: 67 NAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQ 126 N I RL + P + DK + + S G GLNL Sbjct: 632 N----ISFS-------RLDGSTPN-KLRDKLVNDFNKQPVSTNSVFLLSAKSGGVGLNL- 678 Query: 127 YGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRT 186 G + L+ F W+ Q + RI + G + VF+Y ++ IDE + QR Sbjct: 679 IGASRLILFDNDWNPSIDLQAMARI-----HRDGQTKPVFIYRIMTTGCIDEKIFQRQMM 733 Query: 187 KSTIQDLLLN 196 K+ + D L+ Sbjct: 734 KNNLSDKFLD 743 >gi|197101878|ref|NP_001127206.1| probable global transcription activator SNF2L1 [Pongo abelii] gi|55726189|emb|CAH89868.1| hypothetical protein [Pongo abelii] Length = 849 Score = 105 bits (263), Expect = 3e-21, Method: Composition-based stats. Identities = 43/230 (18%), Positives = 90/230 (39%), Gaps = 40/230 (17%) Query: 1 MKQY---HKFQRELYCDLQGENIEAFNSASKTVK------CLQL---ANGAVYYD----- 43 +K Y K QRE Y + ++I+ NS+ K K +QL N +D Sbjct: 204 IKIYLGLSKMQREWYTKILMKDIDVLNSSGKMDKMRLLNILMQLRKCCNHPYLFDGAEPG 263 Query: 44 ---EEKHWKEVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQ---------KAFP 89 + K+ L+ ++ K + +++ L L+ Sbjct: 264 PPYTTDEHIVSNSGKMVVLDKLLAKLKEQGSRVLIFSQMTRLLDILEDYCMWRGYEYCRL 323 Query: 90 QGRTL-DKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 G+T ++ I+ +N + + G G+NL ++++ + W+ + Q Sbjct: 324 DGQTPHEEREEAIEAFNAPNSSKFIFMLSTRAGGLGINL-ASADVVILYDSDWNPQVDLQ 382 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 ++R + G K+ V V+ LI NT++E +++R K + +++ Sbjct: 383 AMDR-----AHRIGQKKPVRVFRLITDNTVEERIVERAEIKLRLDSIVIQ 427 >gi|258570331|ref|XP_002543969.1| rad8 protein [Uncinocarpus reesii 1704] gi|237904239|gb|EEP78640.1| rad8 protein [Uncinocarpus reesii 1704] Length = 979 Score = 105 bits (263), Expect = 3e-21, Method: Composition-based stats. Identities = 32/188 (17%), Positives = 73/188 (38%), Gaps = 32/188 (17%) Query: 24 NSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVII----EKANAAPIIVAYHFNS 79 N+ +K +L EK W+ KI+ I+ + I+ F + Sbjct: 784 NAKAKKRYLRRL---------EKRWE--TSAKIEKTLEILRETETRGEGEKTIIFSQFTT 832 Query: 80 DLARL-----QKAFPQGR------TLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYG 128 L L ++ + R + ++ ++ + ++ + GLNL Sbjct: 833 LLDLLEVPIMKEGWKYRRYDGSMSPIQRNEAVLEFTDSQDCKIMLVSLKAGNAGLNL-VA 891 Query: 129 GNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKS 188 + ++ F +W+ +Q I+R + G R V V+ ++ +NT+++ +L+ K Sbjct: 892 ASQVIIFDPFWNPYIEEQAIDR-----AHRIGQTRPVIVHRILVENTVEDRILELQEQKR 946 Query: 189 TIQDLLLN 196 + + L+ Sbjct: 947 ELIENALD 954 >gi|294501844|ref|YP_003565544.1| SNF2 family helicase [Bacillus megaterium QM B1551] gi|294351781|gb|ADE72110.1| SNF2 family helicase [Bacillus megaterium QM B1551] Length = 876 Score = 105 bits (263), Expect = 3e-21, Method: Composition-based stats. Identities = 34/212 (16%), Positives = 73/212 (34%), Gaps = 23/212 (10%) Query: 3 QYHKFQRELYCDLQGEN--IEAFNSASKTVKCLQLANGAVYYDEEKHWKEV--HDEKIKA 58 Y + + + + + + K L N Y +E K+ K + Sbjct: 650 LYQELVQGMLQETEEKTGFERKGMILQTLNKLKLLCNHPALYLKESAAKQTVRRSHKSEK 709 Query: 59 LEVIIEK--ANAAPIIVAYHFN---SDLAR-LQKAFPQGRT-------LDKDPCTIQEWN 105 + ++E ++ + L R L+K + ++ + ++ Sbjct: 710 IIELVESIRTQQESCLIFTQYIETGLMLQRTLEKEINEPVLFLHGSLSKEQRDAMVAQFQ 769 Query: 106 EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 K + + G GLNL N ++ F WW+ Q +R + G + V Sbjct: 770 ARKKAIFILSLRAGGTGLNLT-AANHVIHFDRWWNPAVENQATDR-----AHRIGQNKFV 823 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 V+ I + TI+E + + + K + + L+ Sbjct: 824 HVHKFITRGTIEEKIDEVMNQKQHLNNELIQG 855 >gi|116074100|ref|ZP_01471362.1| hypothetical protein RS9916_36657 [Synechococcus sp. RS9916] gi|116069405|gb|EAU75157.1| hypothetical protein RS9916_36657 [Synechococcus sp. RS9916] Length = 1060 Score = 105 bits (263), Expect = 3e-21, Method: Composition-based stats. Identities = 39/216 (18%), Positives = 74/216 (34%), Gaps = 34/216 (15%) Query: 8 QRELYCDLQGENIEAFNSA----------SKTVKCLQLANGAVYYDEEKHWKEVH---DE 54 Q+ LY + ++A A K Q+ N +E+ + Sbjct: 827 QKSLYAKTVEDTLDAIARAPRGQRHGQVLGLLTKLKQICNHPALALKEEQATDDFLQRSA 886 Query: 55 KIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKA----------FPQGRTLDKDPC-TI 101 K++ LE I+++ ++ F LQ F G T K+ + Sbjct: 887 KLQRLEEILDEVIEAGDRALLFTQFAEWGHLLQGYLQRRWRSEVPFLSGSTSKKERQAMV 946 Query: 102 QEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQA 159 + E L + G GLNL + + WW+ Q +R + Sbjct: 947 DRFQEDPRGPQLFLLSLKAGGVGLNLTRASH-VFHIDRWWNPAVENQATDR-----AYRI 1000 Query: 160 GFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 G V V+ I +++E + + +R KS + + ++ Sbjct: 1001 GQTNRVMVHKFITSGSVEEKIDRMIREKSRLAEDII 1036 >gi|148243480|ref|YP_001228637.1| SNF2 family DNA/RNA helicase [Synechococcus sp. RCC307] gi|147851790|emb|CAK29284.1| Superfamily II DNA/RNA helicases, SNF2 family [Synechococcus sp. RCC307] Length = 1016 Score = 105 bits (263), Expect = 3e-21, Method: Composition-based stats. Identities = 29/188 (15%), Positives = 65/188 (34%), Gaps = 24/188 (12%) Query: 26 ASKTVKCLQLANGAVY---YDEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHF--- 77 K Q+ N +E K++ LE I+E+ ++ F Sbjct: 810 LGLLTKLKQICNHPALLLGEEEVGTDFASRSAKLQRLEEILEEVMEAGDRALLFTQFASW 869 Query: 78 -----NSDLARLQKAFP---QGRTLDKDPCTIQEWNEG--KIPLLFAHPASCGHGLNLQY 127 R ++ P G + ++ + + + L + G GLNL Sbjct: 870 GHLLKTHLQQRWRQEVPFLHGGSSKNERQAMVDRFQQDPRGPQLFLLSLKAGGVGLNLTR 929 Query: 128 GGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTK 187 + + WW+ Q +R + G + V V+ I +++E + + ++ K Sbjct: 930 ASH-VFHIDRWWNPAVENQATDR-----AYRIGQTQRVLVHKFITTGSLEEKIDRMIQEK 983 Query: 188 STIQDLLL 195 +++ ++ Sbjct: 984 ASLAADIV 991 >gi|302144115|emb|CBI23220.3| unnamed protein product [Vitis vinifera] Length = 679 Score = 105 bits (263), Expect = 3e-21, Method: Composition-based stats. Identities = 36/156 (23%), Positives = 60/156 (38%), Gaps = 21/156 (13%) Query: 52 HDEKIKALEV----IIEKANAAPIIVAYHFNSDLARLQKAFPQGR----------TLDKD 97 KI+AL+ ++E +A IV F S L + + Q T Sbjct: 529 TSTKIEALKEEIRFMVEMDGSAKGIVFSQFTSFLDLISYSLHQSGINCVQLVGKMTATAK 588 Query: 98 PCTIQEWNE-GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 ++ +NE + S G LNL + + WW+ QQ +RI Sbjct: 589 DAAVKRFNEDPDCKIFLTSLKSGGAALNLPV-ASYVFLMEPWWNPFVEQQAYDRI----- 642 Query: 157 RQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQD 192 + G + V V I +NTI+E +L+ K ++ + Sbjct: 643 HRIGQYKPVRVIKFIIENTIEERILELQEKKESLSE 678 >gi|225444469|ref|XP_002267771.1| PREDICTED: hypothetical protein [Vitis vinifera] Length = 792 Score = 105 bits (263), Expect = 3e-21, Method: Composition-based stats. Identities = 36/156 (23%), Positives = 60/156 (38%), Gaps = 21/156 (13%) Query: 52 HDEKIKALEV----IIEKANAAPIIVAYHFNSDLARLQKAFPQGR----------TLDKD 97 KI+AL+ ++E +A IV F S L + + Q T Sbjct: 621 TSTKIEALKEEIRFMVEMDGSAKGIVFSQFTSFLDLISYSLHQSGINCVQLVGKMTATAK 680 Query: 98 PCTIQEWNE-GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 ++ +NE + S G LNL + + WW+ QQ +RI Sbjct: 681 DAAVKRFNEDPDCKIFLTSLKSGGAALNLPV-ASYVFLMEPWWNPFVEQQAYDRI----- 734 Query: 157 RQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQD 192 + G + V V I +NTI+E +L+ K ++ + Sbjct: 735 HRIGQYKPVRVIKFIIENTIEERILELQEKKESLSE 770 >gi|195380475|ref|XP_002048996.1| GJ21345 [Drosophila virilis] gi|194143793|gb|EDW60189.1| GJ21345 [Drosophila virilis] Length = 714 Score = 105 bits (263), Expect = 3e-21, Method: Composition-based stats. Identities = 46/231 (19%), Positives = 89/231 (38%), Gaps = 37/231 (16%) Query: 6 KFQRELYCDLQGENIEAFNSASKTVK---------CLQLANGAVYYD--------EEKHW 48 K QRE Y L ++I+ N A K K + N +D Sbjct: 375 KLQREWYTKLLLKDIDVVNGAGKIEKMRLQNILVHLRKCTNHPYLFDGAEPGPPYTTDEH 434 Query: 49 KEVHDEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQ---------KAFPQGRTLDKD 97 K+ L+ ++ K + +++ L L+ G+T +D Sbjct: 435 LVNDSGKMIILDKLLPKLQEQGSRVLIFSQMTRMLDILEDYCAWRNYNYCRLDGKTEHED 494 Query: 98 P-CTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 IQE+N K + + G G+NL ++++ + W+ + Q ++R Sbjct: 495 RNQMIQEYNMEKSTKFIFLLSTRAGGLGINL-ATADVVIIYDSDWNPQMDLQAMDR---- 549 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIHV 205 + G K+ V V+ L+ +NT+DE +++R K + +++ A + H Sbjct: 550 -AHRIGQKKQVRVFRLVTENTVDEKIVERAEVKLRLDRMVIQAGRVLENHT 599 >gi|291408171|ref|XP_002720328.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent regulator of chromatin a1-like isoform 3 [Oryctolagus cuniculus] Length = 1049 Score = 105 bits (263), Expect = 3e-21, Method: Composition-based stats. Identities = 43/230 (18%), Positives = 90/230 (39%), Gaps = 40/230 (17%) Query: 1 MKQY---HKFQRELYCDLQGENIEAFNSASKTVK------CLQL---ANGAVYYD----- 43 +K Y K QRE Y + ++I+ NS+ K K +QL N +D Sbjct: 420 IKIYLGLSKMQREWYTKILMKDIDVLNSSGKMDKMRLLNILMQLRKCCNHPYLFDGAEPG 479 Query: 44 ---EEKHWKEVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQ---------KAFP 89 + K+ L+ ++ K + +++ L L+ Sbjct: 480 PPYTTDEHIVNNSGKMLVLDKLLAKLKEQGSRVLIFSQMTRLLDILEDYCMWRGYEYCRL 539 Query: 90 QGRTL-DKDPCTIQEWN--EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 G+T ++ I+ +N + + G G+NL ++++ + W+ + Q Sbjct: 540 DGQTPHEEREEAIEAFNVPNSSKFIFMLSTRAGGLGINL-ASADVVILYDSDWNPQVDLQ 598 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 ++R + G K+ V V+ LI NT++E +++R K + +++ Sbjct: 599 AMDR-----AHRIGQKKPVRVFRLITDNTVEERIVERAEIKLRLDSIVIQ 643 >gi|302691444|ref|XP_003035401.1| hypothetical protein SCHCODRAFT_81511 [Schizophyllum commune H4-8] gi|300109097|gb|EFJ00499.1| hypothetical protein SCHCODRAFT_81511 [Schizophyllum commune H4-8] Length = 842 Score = 105 bits (263), Expect = 3e-21, Method: Composition-based stats. Identities = 35/160 (21%), Positives = 63/160 (39%), Gaps = 22/160 (13%) Query: 53 DEKIKALEVIIEKA---NAAPIIVAYHFNSDLARLQKAFPQGR----------TLDKDPC 99 K LE +++ I++ ++ L +K R T K Sbjct: 598 SGKFVVLERFLQRMRTTTTDKIVLISNYTQTLDLFEKMLRGKRYGYFRLDGTMTTTKRQK 657 Query: 100 TIQEWNEG---KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 + E+N+ + + + G G+NL G N L+ F W+ QQ + R+ Sbjct: 658 MVDEFNDPNNTEKFVFLLSSKAGGCGINL-IGANRLILFDPDWNPAADQQALARVW---- 712 Query: 157 RQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + G K+ FVY I+ TI+E + QR K + +++ Sbjct: 713 -RDGQKKECFVYRFISTGTIEEKIFQRQANKQALSSSVVD 751 >gi|242046730|ref|XP_002461111.1| hypothetical protein SORBIDRAFT_02g040960 [Sorghum bicolor] gi|241924488|gb|EER97632.1| hypothetical protein SORBIDRAFT_02g040960 [Sorghum bicolor] Length = 822 Score = 105 bits (263), Expect = 3e-21, Method: Composition-based stats. Identities = 39/169 (23%), Positives = 69/169 (40%), Gaps = 27/169 (15%) Query: 43 DEEKHWKEVHDE----KIKALEVIIEKA-NAAPI---IVAYHFNSDLARLQKAFPQGRTL 94 DE+ D K++AL +++ + N P+ +V F L L+ + Sbjct: 632 DEDGSSNLESDRPLSSKVQALLKLLKASQNEDPLSKSVVFSQFKQMLILLESPLRKAGFK 691 Query: 95 ----------DKDPCTIQEWNEG--KIP-LLFAHPASCGHGLNLQYGGNILVFFSLWWDL 141 K IQE+ G P +L A + G G+NL + + F WW+ Sbjct: 692 TLRLDGSMSAKKRLQVIQEFTHGGPDSPTVLLASLKAAGAGVNLT-AASTVYLFDPWWNP 750 Query: 142 EEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 +Q ++R+ + G K+ V V LI +++I+E +L K + Sbjct: 751 GVEEQAMDRV-----HRIGQKKEVKVIRLIVKDSIEERILTLQERKKRL 794 >gi|291408169|ref|XP_002720327.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent regulator of chromatin a1-like isoform 2 [Oryctolagus cuniculus] Length = 1041 Score = 105 bits (263), Expect = 3e-21, Method: Composition-based stats. Identities = 43/230 (18%), Positives = 90/230 (39%), Gaps = 40/230 (17%) Query: 1 MKQY---HKFQRELYCDLQGENIEAFNSASKTVK------CLQL---ANGAVYYD----- 43 +K Y K QRE Y + ++I+ NS+ K K +QL N +D Sbjct: 412 IKIYLGLSKMQREWYTKILMKDIDVLNSSGKMDKMRLLNILMQLRKCCNHPYLFDGAEPG 471 Query: 44 ---EEKHWKEVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQ---------KAFP 89 + K+ L+ ++ K + +++ L L+ Sbjct: 472 PPYTTDEHIVNNSGKMLVLDKLLAKLKEQGSRVLIFSQMTRLLDILEDYCMWRGYEYCRL 531 Query: 90 QGRTL-DKDPCTIQEWN--EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 G+T ++ I+ +N + + G G+NL ++++ + W+ + Q Sbjct: 532 DGQTPHEEREEAIEAFNVPNSSKFIFMLSTRAGGLGINL-ASADVVILYDSDWNPQVDLQ 590 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 ++R + G K+ V V+ LI NT++E +++R K + +++ Sbjct: 591 AMDR-----AHRIGQKKPVRVFRLITDNTVEERIVERAEIKLRLDSIVIQ 635 >gi|146413212|ref|XP_001482577.1| hypothetical protein PGUG_05597 [Meyerozyma guilliermondii ATCC 6260] Length = 814 Score = 105 bits (263), Expect = 3e-21, Method: Composition-based stats. Identities = 33/167 (19%), Positives = 65/167 (38%), Gaps = 21/167 (12%) Query: 45 EKHWKEVHDEKIKALEVI---IEKANAAPIIVAYHFNSDLARLQK----------AFPQG 91 +K + + K LE I I++ ++ L +++ Sbjct: 563 DKEIRTWYSGKFAMLERFLHQIRTETDDKIVLISNYTQTLDLIERMCRYKRYQCCRLDGT 622 Query: 92 RTLDKDPCTIQEWN--EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIE 149 ++K + +N EG+ + + G G+NL G N L+ W+ QQ + Sbjct: 623 MNINKRQKLVDRFNDPEGQEFIFLLSSKAGGCGINL-IGANRLILLDPDWNPAADQQALA 681 Query: 150 RIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 R+ + G K+ F+Y I TI+E + QR K ++ +++ Sbjct: 682 RVW-----RDGQKKDCFIYRFILTGTIEEKIFQRQSMKLSLSSCVVD 723 >gi|261157174|gb|ACX54781.1| DEAD/DEAH box helicase domain-containing protein PIE1 [Oryza sativa Japonica Group] Length = 2044 Score = 105 bits (263), Expect = 3e-21, Method: Composition-based stats. Identities = 35/166 (21%), Positives = 72/166 (43%), Gaps = 19/166 (11%) Query: 44 EEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAF---------PQGR 92 ++ + K++ L +++ + + ++ L L++ G Sbjct: 1069 PDRRLIQFDCGKLQELAILLRRLKSEGHRALIFTQMTKMLDILEEFINLYGYTYLRLDGS 1128 Query: 93 TLDKDPCTI-QEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 T ++ T+ Q +N K L S G G+NL G + ++F+ W+ QQ +R Sbjct: 1129 TQPEERQTLMQRFNTNPKFFLFILSTRSGGVGINL-VGADTVIFYDSDWNPAMDQQAQDR 1187 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + G R V +Y LI+++TI+E +L++ K + DL++ Sbjct: 1188 C-----HRIGQTREVHIYRLISESTIEENILKKANQKRALDDLVIQ 1228 >gi|308198272|ref|XP_001386950.2| protein required for X-ray damage repair, mitotic recombination, and full meiotic recombination. mRNA increases in meiosis [Scheffersomyces stipitis CBS 6054] gi|149388940|gb|EAZ62927.2| protein required for X-ray damage repair, mitotic recombination, and full meiotic recombination. mRNA increases in meiosis [Pichia stipitis CBS 6054] Length = 821 Score = 105 bits (263), Expect = 3e-21, Method: Composition-based stats. Identities = 32/168 (19%), Positives = 68/168 (40%), Gaps = 23/168 (13%) Query: 45 EKHWKEVHDEKIKALE----VIIEKANAAPIIVAYHFNSDLARLQK----------AFPQ 90 + + + K LE I + N +++ ++ L +++ Sbjct: 570 NREVQSWYSGKFMILERFLYQIRSQTNDKIVLI-SNYTQTLDLIERMCRHKKYGSLRLDG 628 Query: 91 GRTLDKDPCTIQEWN--EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMI 148 +++K + ++N EG + + G G+NL G N L+ W+ QQ + Sbjct: 629 TLSINKRQKLVDKFNDPEGNEFIFLLSSKAGGCGINL-IGANRLILMDPDWNPAADQQAL 687 Query: 149 ERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 R+ + G K+ F+Y I+ TI+E + QR K ++ +++ Sbjct: 688 ARVW-----RDGQKKDCFIYRFISTGTIEEKIFQRQSMKMSLSSCVVD 730 >gi|115313218|gb|AAI24095.1| Hells protein [Danio rerio] Length = 769 Score = 105 bits (263), Expect = 3e-21, Method: Composition-based stats. Identities = 29/139 (20%), Positives = 57/139 (41%), Gaps = 17/139 (12%) Query: 68 AAPIIVAYHFNSDLARLQ-----KAFPQGRT------LDKDPCTIQEWNEGKIPLLFAHP 116 +++ S L L + + R D+D + ++ ++ L Sbjct: 631 GHKVLIFSQMTSILDILMDYCYLRGYEYSRLDGSMSYADRDENMKKFSSDPEVFLFLLST 690 Query: 117 ASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTI 176 + G G+NL + ++ F W+ + Q +R + G + V VY LI NTI Sbjct: 691 RAGGLGINLT-SADTVIIFGSDWNPQADLQAQDRC-----HRIGQTKPVVVYRLITANTI 744 Query: 177 DELVLQRLRTKSTIQDLLL 195 DE +L+R K ++ +++ Sbjct: 745 DEKILERASAKRKLEKMVI 763 >gi|41052809|dbj|BAD07677.1| putative photoperiod independent early flowering1 [Oryza sativa Japonica Group] Length = 2021 Score = 105 bits (263), Expect = 3e-21, Method: Composition-based stats. Identities = 35/166 (21%), Positives = 72/166 (43%), Gaps = 19/166 (11%) Query: 44 EEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAF---------PQGR 92 ++ + K++ L +++ + + ++ L L++ G Sbjct: 1046 PDRRLIQFDCGKLQELAILLRRLKSEGHRALIFTQMTKMLDILEEFINLYGYTYLRLDGS 1105 Query: 93 TLDKDPCTI-QEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 T ++ T+ Q +N K L S G G+NL G + ++F+ W+ QQ +R Sbjct: 1106 TQPEERQTLMQRFNTNPKFFLFILSTRSGGVGINL-VGADTVIFYDSDWNPAMDQQAQDR 1164 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + G R V +Y LI+++TI+E +L++ K + DL++ Sbjct: 1165 C-----HRIGQTREVHIYRLISESTIEENILKKANQKRALDDLVIQ 1205 >gi|326430023|gb|EGD75593.1| snf family helicase [Salpingoeca sp. ATCC 50818] Length = 3098 Score = 105 bits (263), Expect = 3e-21, Method: Composition-based stats. Identities = 30/167 (17%), Positives = 66/167 (39%), Gaps = 19/167 (11%) Query: 44 EEKHWKEVHDEKIKALEVII--EKANAAPIIVAYHFNSDLARLQK----------AFPQG 91 ++ + H K++ LE ++ +KA +++ L L++ Sbjct: 1619 PDRALIQYHCSKLQVLEKLLREKKAGGHRVLIFTQMAKMLDILEQFLAFHAFTYLRLDGS 1678 Query: 92 RTLDKDPCTIQEWNEG-KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 + + + +N ++ S G G+NL G + +VF+ W+ Q Sbjct: 1679 TPVVRRQQMTERFNRDSRLFCFILSTRSGGLGVNLT-GADTVVFYDSDWNPTMDAQA--- 1734 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 R + G R V +Y L+ T++E +L++ + K + D+ + Sbjct: 1735 --QDRAHRLGQTRDVHIYRLVCAKTVEENILKKAQQKRQLGDIAIEG 1779 >gi|322825988|gb|EFZ30789.1| DNA repair and recombination protein RAD54, putative [Trypanosoma cruzi] Length = 1044 Score = 105 bits (263), Expect = 3e-21, Method: Composition-based stats. Identities = 30/159 (18%), Positives = 65/159 (40%), Gaps = 19/159 (11%) Query: 58 ALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRT----------LDKDPCTIQEWNEG 107 L+ + + +++ +F L + Q R + + + +N Sbjct: 705 MLDELRNNGDRDKLVIVSNFTQTLDVIANMCRQKRISFFQLDGSMPVKRRQEVVDRFNVP 764 Query: 108 KIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 + + + G GLNL G N L+ F W+ Q + R+ + G K+ V Sbjct: 765 ESQEIVFLLSSKAGGVGLNL-IGANRLILFDPDWNPANDAQAMGRVW-----RDGQKKRV 818 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIH 204 F+Y L++ +I+E + QR +K + +++ +K ++ Sbjct: 819 FIYRLLSAGSIEEKIYQRQVSKQGLSANVVD-MKSDSKQ 856 >gi|71651467|ref|XP_814411.1| DNA repair and recombination protein RAD54 [Trypanosoma cruzi strain CL Brener] gi|70879380|gb|EAN92560.1| DNA repair and recombination protein RAD54, putative [Trypanosoma cruzi] Length = 1047 Score = 105 bits (263), Expect = 3e-21, Method: Composition-based stats. Identities = 30/159 (18%), Positives = 65/159 (40%), Gaps = 19/159 (11%) Query: 58 ALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRT----------LDKDPCTIQEWNEG 107 L+ + + +++ +F L + Q R + + + +N Sbjct: 705 MLDELRNNGDRDKLVIVSNFTQTLDVIANMCRQKRISFFQLDGSMPVKRRQEVVDRFNVP 764 Query: 108 KIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 + + + G GLNL G N L+ F W+ Q + R+ + G K+ V Sbjct: 765 ESQEIVFLLSSKAGGVGLNL-IGANRLILFDPDWNPANDAQAMGRVW-----RDGQKKRV 818 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIH 204 F+Y L++ +I+E + QR +K + +++ +K ++ Sbjct: 819 FIYRLLSAGSIEEKIYQRQVSKQGLSANVVD-MKSDSKQ 856 >gi|71662508|ref|XP_818260.1| DNA repair and recombination protein RAD54 [Trypanosoma cruzi strain CL Brener] gi|70883500|gb|EAN96409.1| DNA repair and recombination protein RAD54, putative [Trypanosoma cruzi] Length = 1045 Score = 105 bits (263), Expect = 3e-21, Method: Composition-based stats. Identities = 30/159 (18%), Positives = 65/159 (40%), Gaps = 19/159 (11%) Query: 58 ALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRT----------LDKDPCTIQEWNEG 107 L+ + + +++ +F L + Q R + + + +N Sbjct: 705 MLDELRNNGDRDKLVIVSNFTQTLDVIANMCRQKRISFFQLDGSMPVKRRQEVVDRFNVP 764 Query: 108 KIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 + + + G GLNL G N L+ F W+ Q + R+ + G K+ V Sbjct: 765 ESQEIVFLLSSKAGGVGLNL-IGANRLILFDPDWNPANDAQAMGRVW-----RDGQKKRV 818 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIH 204 F+Y L++ +I+E + QR +K + +++ +K ++ Sbjct: 819 FIYRLLSAGSIEEKIYQRQVSKQGLSANVVD-MKSDSKQ 856 >gi|169612227|ref|XP_001799531.1| hypothetical protein SNOG_09232 [Phaeosphaeria nodorum SN15] gi|206557941|sp|Q0UG82|INO80_PHANO RecName: Full=Putative DNA helicase INO80 gi|160702459|gb|EAT83424.2| hypothetical protein SNOG_09232 [Phaeosphaeria nodorum SN15] Length = 1673 Score = 105 bits (263), Expect = 4e-21, Method: Composition-based stats. Identities = 29/161 (18%), Positives = 64/161 (39%), Gaps = 19/161 (11%) Query: 50 EVHDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAF---------PQGRTL--DK 96 K+ L+ +++ KA +++ + + +++ G T D+ Sbjct: 1395 VTDSGKLARLDALLKGLKAGDHRVLLYFQMTRMIDLMEEYLTYRNYKYCRLDGSTKLEDR 1454 Query: 97 DPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 ++ I + + G G+NL + ++F+ W+ Q ++R Sbjct: 1455 RDTVADFQSDPTIFVFLLSTRAGGLGINLT-SADTVIFYDSDWNPTIDSQAMDR-----A 1508 Query: 157 RQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + G R V VY LI TI+E + +R K +Q ++++ Sbjct: 1509 HRLGQTRQVTVYRLITSGTIEERIRKRALQKEEVQRVVISG 1549 >gi|66827655|ref|XP_647182.1| myb domain-containing protein [Dictyostelium discoideum AX4] gi|60475337|gb|EAL73272.1| myb domain-containing protein [Dictyostelium discoideum AX4] Length = 3069 Score = 105 bits (262), Expect = 4e-21, Method: Composition-based stats. Identities = 35/167 (20%), Positives = 67/167 (40%), Gaps = 19/167 (11%) Query: 44 EEKHWKEVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQ---------KAFPQGR 92 +K + K++ L +++ + ++ L + G Sbjct: 1369 PDKRLIQYDCGKLQQLAILLRRLKQQGHRALIFTQMTKMLDIFETFLNLHAYTYLRLDGS 1428 Query: 93 T-LDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 T +DK + +N + KI L S G GLNL G + ++F+ W+ Q +R Sbjct: 1429 TKIDKRQVLTERFNTDPKIFLFILSTRSGGLGLNLT-GADTVIFYDTDWNPSMDAQAQDR 1487 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + G R V +Y I Q+TI+E +L++ K + +++ A Sbjct: 1488 C-----HRIGQTREVNIYRFITQHTIEENILKKSNQKRQLDKMVIKA 1529 >gi|290998710|ref|XP_002681923.1| SNF2 domain-containing protein [Naegleria gruberi] gi|284095549|gb|EFC49179.1| SNF2 domain-containing protein [Naegleria gruberi] Length = 1231 Score = 105 bits (262), Expect = 4e-21, Method: Composition-based stats. Identities = 26/158 (16%), Positives = 64/158 (40%), Gaps = 21/158 (13%) Query: 52 HDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQKAFPQGRT----------LDKDPC 99 K+K L+ ++ K +++ + L++ + R + + Sbjct: 1031 DSGKLKVLDQLLSKLKQEGHRVLIFCQMTKMMDLLEEYMYKRRYTFFRLDGSTGISERRD 1090 Query: 100 TIQEWNEGKIP---LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 + + ++ + G G+ L + ++F+ W+ Q ++R+ Sbjct: 1091 MVDAFQNQRVDPVFAFLLSTKAGGLGITLT-AADTVIFYDSDWNPTLDAQAMDRV----- 1144 Query: 157 RQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 + G + V +Y LI +N+++E +L + KSTIQ+ + Sbjct: 1145 HRIGQTKPVTIYRLITKNSVEERILAIAKQKSTIQETV 1182 >gi|168025390|ref|XP_001765217.1| SNF2 superfamily chromatin remodeling protein [Physcomitrella patens subsp. patens] gi|162683536|gb|EDQ69945.1| SNF2 superfamily chromatin remodeling protein [Physcomitrella patens subsp. patens] Length = 2041 Score = 105 bits (262), Expect = 4e-21, Method: Composition-based stats. Identities = 39/190 (20%), Positives = 73/190 (38%), Gaps = 37/190 (19%) Query: 39 AVYYDEEKHWKEVHDE-KIKALEVIIEK----------------ANAAPIIVAYHFNSDL 81 A+ K E+H K++AL I+E+ +++ + L Sbjct: 1778 AIAQSGAKDLHELHHAPKLQALRDILEECGIGVPAAAESSASPEGGHHRVLIFAQLKNFL 1837 Query: 82 ARLQK-------------AFPQGRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQY 127 ++K DK ++ +N + I +L G GLNL Sbjct: 1838 DIIEKDLFQTHMKGVTYLRLDGSVESDKRFDIVKAFNSDPTIDVLLLTTHVGGLGLNLT- 1896 Query: 128 GGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTK 187 + +VF W+ Q ++R + G KR V V+ LI + T++E ++ R K Sbjct: 1897 AADTVVFMEHDWNPMRDLQAMDR-----AHRLGQKRVVNVHRLIMRGTLEEKIMSLQRFK 1951 Query: 188 STIQDLLLNA 197 ++ + ++NA Sbjct: 1952 ISVANTVINA 1961 >gi|172087300|ref|XP_001913192.1| TBP-associated factor 172 [Oikopleura dioica] gi|48994300|gb|AAT47874.1| TBP-associated factor 172 [Oikopleura dioica] Length = 1665 Score = 105 bits (262), Expect = 4e-21, Method: Composition-based stats. Identities = 45/194 (23%), Positives = 76/194 (39%), Gaps = 26/194 (13%) Query: 13 CDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKI----KALEVIIEK--- 65 D G +I A K QL H I K++ IIE+ Sbjct: 1405 LDRNGSSIRDIEHAPKIKALKQLLTECGIGQRNGSVVSEHRALIFCQHKSMLDIIERDLF 1464 Query: 66 -ANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGL 123 +N P + RL + P G + +N + I +L G GL Sbjct: 1465 KSNQLPSVSFS-------RLDGSVPAG----ARHGIVSRFNRDPTIDVLLLTTKVGGLGL 1513 Query: 124 NLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQR 183 NL G ++++F W+ + Q ++R + G K+ V VY LI +NT++E ++ Sbjct: 1514 NLT-GADVVIFVEHDWNPQMDLQAMDR-----AHRIGQKKTVNVYRLITRNTVEEKIMGL 1567 Query: 184 LRTKSTIQDLLLNA 197 + K +I + L++ Sbjct: 1568 QKFKLSIANSLVSG 1581 >gi|238879929|gb|EEQ43567.1| hypothetical protein CAWG_01805 [Candida albicans WO-1] Length = 1388 Score = 105 bits (262), Expect = 4e-21, Method: Composition-based stats. Identities = 29/156 (18%), Positives = 64/156 (41%), Gaps = 19/156 (12%) Query: 53 DEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQK----------AFPQGRTLDKDPCT 100 K+ L+ ++ I++ + + ++ T++ Sbjct: 1236 SGKLAKLDELLIDLKRGGHRILIYFQMTRMMQIFEEYLAYKSYKYIRLDGSTTIESRREM 1295 Query: 101 IQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQA 159 +Q W +I + + G GLNL + ++F+ W+ Q ++R + Sbjct: 1296 VQAWQTNPEIFIFMLSTRAGGLGLNLT-SADTVIFYDSDWNPTIDSQAMDR-----AHRI 1349 Query: 160 GFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 G + V V+ L+ +NTI++ +L+R + K IQ L++ Sbjct: 1350 GQTKQVKVFRLVTRNTIEQKILERAKEKEEIQKLVV 1385 >gi|145353082|ref|XP_001420858.1| predicted protein [Ostreococcus lucimarinus CCE9901] gi|144581093|gb|ABO99151.1| predicted protein [Ostreococcus lucimarinus CCE9901] Length = 522 Score = 105 bits (262), Expect = 4e-21, Method: Composition-based stats. Identities = 39/212 (18%), Positives = 78/212 (36%), Gaps = 30/212 (14%) Query: 5 HKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYD-----EEKHWKEV---HDEKI 56 ++ + +N + N S ++ + N + E+ E K+ Sbjct: 269 QSLEKATKGEGGADNFQKLN--SLLMQLRKCCNHPFLFTGTDVPEDGVPIEDLISASGKL 326 Query: 57 KALEVIIEKA--NAAPIIVAYHFNSDLARLQ---------KAFPQGRT-LDKDPCTIQEW 104 L+ +++K +++ F S L LQ A G T + I + Sbjct: 327 AVLDRMLQKLKEGGHRVVLFSQFTSMLDILQDFLTLRGYTYARLDGSTNRVQRSIDIAAF 386 Query: 105 NEGKIPLL--FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFK 162 N P+ + G G+NLQ + + F W+ + Q + R+ + G K Sbjct: 387 NRPDSPMFAFLLSTRAGGLGVNLQT-ADTCILFDSDWNPQVDLQAMARV-----HRIGQK 440 Query: 163 RAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 + V +Y L+ T++E + QR K + ++ Sbjct: 441 KMVHIYRLVTAGTVEERMTQRAEKKLFLDQMV 472 >gi|168053884|ref|XP_001779364.1| SNF2 family DNA-dependent ATPase [Physcomitrella patens subsp. patens] gi|162669280|gb|EDQ55871.1| SNF2 family DNA-dependent ATPase [Physcomitrella patens subsp. patens] Length = 719 Score = 105 bits (262), Expect = 4e-21, Method: Composition-based stats. Identities = 31/165 (18%), Positives = 65/165 (39%), Gaps = 19/165 (11%) Query: 46 KHWKEVHDEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQKAFP---------QGRTL 94 + K +AL ++ K ++ + S L L+ A G T Sbjct: 533 DDDHALASAKCQALARLLPKLQQGGHRTLIFSQWTSMLDILEWALDVMGFSYTRLDGSTQ 592 Query: 95 DKDPCTI--QEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIG 152 + T+ + N+ I + + G GLNL G + ++ L ++ + +Q +R Sbjct: 593 VSERQTLVDEFNNDPSIFVFLLSTRAGGQGLNLT-GADTVILHDLDFNPQMDRQAEDRC- 650 Query: 153 VTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + G + V +Y L+ ++T+DE + + + K + +L Sbjct: 651 ----HRIGQSKPVTIYRLVTKDTVDESIYKIAQQKLVLDAAVLEG 691 >gi|261335089|emb|CBH18083.1| ATP-dependent helicase, putative [Trypanosoma brucei gambiense DAL972] Length = 1211 Score = 105 bits (262), Expect = 4e-21, Method: Composition-based stats. Identities = 29/156 (18%), Positives = 68/156 (43%), Gaps = 19/156 (12%) Query: 55 KIKALEVIIEKA--NAAPIIVAYHFNSDLARLQK----------AFPQGRTLDKDPCTIQ 102 K++ L+ +++ +++ F L L++ ++ + Sbjct: 841 KLQFLKHCLKQLRREGHRMLIFTQFVHMLNILERFLALIGLPYLRIDGSTQPERRQAYVD 900 Query: 103 EWNEGK-IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGF 161 +NE + I + S G GLNL G + ++F+ W+ Q +R + G Sbjct: 901 WFNEDERITCMILSTRSGGIGLNLT-GADTVIFYDSDWNPTMDLQAQDRC-----HRIGQ 954 Query: 162 KRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + V +Y LI+++T++E +LQ+ R + + ++++ Sbjct: 955 TKPVTIYRLISEHTVEESILQKARERKKLNNVVIRG 990 >gi|68491912|ref|XP_710254.1| potential DNA-dependent ATPase Ino80p [Candida albicans SC5314] gi|68491929|ref|XP_710247.1| potential DNA-dependent ATPase Ino80p [Candida albicans SC5314] gi|74679547|sp|Q59KI4|INO80_CANAL RecName: Full=Putative DNA helicase INO80 gi|46431413|gb|EAK90982.1| potential DNA-dependent ATPase Ino80p [Candida albicans SC5314] gi|46431421|gb|EAK90989.1| potential DNA-dependent ATPase Ino80p [Candida albicans SC5314] Length = 1387 Score = 105 bits (262), Expect = 4e-21, Method: Composition-based stats. Identities = 29/156 (18%), Positives = 64/156 (41%), Gaps = 19/156 (12%) Query: 53 DEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQK----------AFPQGRTLDKDPCT 100 K+ L+ ++ I++ + + ++ T++ Sbjct: 1235 SGKLAKLDELLIDLKRGGHRILIYFQMTRMMQIFEEYLAYKSYKYIRLDGSTTIESRREM 1294 Query: 101 IQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQA 159 +Q W +I + + G GLNL + ++F+ W+ Q ++R + Sbjct: 1295 VQAWQTNPEIFIFMLSTRAGGLGLNLT-SADTVIFYDSDWNPTIDSQAMDR-----AHRI 1348 Query: 160 GFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 G + V V+ L+ +NTI++ +L+R + K IQ L++ Sbjct: 1349 GQTKQVKVFRLVTRNTIEQKILERAKEKEEIQKLVV 1384 >gi|328864923|gb|EGG13309.1| DEAD-box RNA helicase [Dictyostelium fasciculatum] Length = 1558 Score = 105 bits (262), Expect = 4e-21, Method: Composition-based stats. Identities = 34/173 (19%), Positives = 68/173 (39%), Gaps = 24/173 (13%) Query: 46 KHWKEVHDEKIKALEVIIEKANAA----PIIVAYHFNSDLARLQKAFPQGRT-------- 93 +WK K+ +L ++K + +V + S L ++ Q Sbjct: 1385 DNWK--SSTKVDSLMSELDKVHRKDSDAKSLVFSQWTSMLDLIEIPLQQAGIGYVRLDGK 1442 Query: 94 --LDKDPCTIQEW-NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 + I+++ EG I + + G GLNL + + WW+ +Q I+R Sbjct: 1443 LAQKQREANIKKFKEEGSIKVFLISMKAGGLGLNLVVASH-VFLLDPWWNPATEEQAIDR 1501 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETI 203 + + G + V V + +N+I+E +L+ + K + L +KK+ Sbjct: 1502 V-----YRIGQNKNVNVTRFVIKNSIEERILKLQQNKKNLAQDTLQ-MKKQIR 1548 >gi|74025142|ref|XP_829137.1| SNF2 DNA repair protein [Trypanosoma brucei TREU927] gi|70834523|gb|EAN80025.1| SNF2 DNA repair protein, putative [Trypanosoma brucei] Length = 1211 Score = 105 bits (262), Expect = 4e-21, Method: Composition-based stats. Identities = 29/156 (18%), Positives = 68/156 (43%), Gaps = 19/156 (12%) Query: 55 KIKALEVIIEKA--NAAPIIVAYHFNSDLARLQK----------AFPQGRTLDKDPCTIQ 102 K++ L+ +++ +++ F L L++ ++ + Sbjct: 841 KLQFLKHCLKQLRREGHRMLIFTQFVHMLNILERFLALIGLPYLRIDGSTQPERRQAYVD 900 Query: 103 EWNEGK-IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGF 161 +NE + I + S G GLNL G + ++F+ W+ Q +R + G Sbjct: 901 WFNEDERITCMILSTRSGGIGLNLT-GADTVIFYDSDWNPTMDLQAQDRC-----HRIGQ 954 Query: 162 KRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + V +Y LI+++T++E +LQ+ R + + ++++ Sbjct: 955 TKPVTIYRLISEHTVEESILQKARERKKLNNVVIRG 990 >gi|299751759|ref|XP_002911684.1| RAD54B protein [Coprinopsis cinerea okayama7#130] gi|298409521|gb|EFI28190.1| RAD54B protein [Coprinopsis cinerea okayama7#130] Length = 1055 Score = 105 bits (262), Expect = 4e-21, Method: Composition-based stats. Identities = 42/193 (21%), Positives = 64/193 (33%), Gaps = 22/193 (11%) Query: 16 QGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAY 75 + A + GA D K + K L+ I ++V Sbjct: 684 GDKESSCLERAGVKEALRLMPEGAQVSDMTLSGKLIVLAK--MLKDIRNNTEEKCVVV-S 740 Query: 76 HFNSDLARLQ----------KAFPQGRTLDKDPCTIQEWNEGKIP---LLFAHPASCGHG 122 HF S L L+ K + +N+ + + G G Sbjct: 741 HFTSTLNILEAFCQQAGYSFYRLDGQTPQQKRQEYVNAFNKSSQRGGFVFLLSSKAGGVG 800 Query: 123 LNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQ 182 +NL GG+ L W+ Q + R + G KR VF+Y L+ TIDE + Q Sbjct: 801 INL-IGGSRLFLIDSDWNPSHDLQAMARC-----HRDGQKRPVFIYRLVTAGTIDEKIFQ 854 Query: 183 RLRTKSTIQDLLL 195 R TK + L+ Sbjct: 855 RQITKLGLSASLI 867 >gi|224004374|ref|XP_002295838.1| predicted protein [Thalassiosira pseudonana CCMP1335] gi|209585870|gb|ACI64555.1| predicted protein [Thalassiosira pseudonana CCMP1335] Length = 153 Score = 105 bits (262), Expect = 4e-21, Method: Composition-based stats. Identities = 30/139 (21%), Positives = 56/139 (40%), Gaps = 20/139 (14%) Query: 72 IVAYHFNSDLA------------RLQKAFPQGRTL-DKDPCTIQEWNEGK-IPLLFAHPA 117 ++ F L L+ G+ ++ ++ +N I +L Sbjct: 3 LIFAQFTQSLDVVERFLFEPHMPSLEYLRLDGKVPSNRRSAIVERFNHDDNIKVLLLTTK 62 Query: 118 SCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 G GLNL G + ++F W+ Q ++R + G + V VY LI +TI+ Sbjct: 63 VGGLGLNLT-GADKVIFLEPDWNPFVDLQAMDR-----AHRIGQTKTVNVYRLITTDTIE 116 Query: 178 ELVLQRLRTKSTIQDLLLN 196 E +++ + K T D ++N Sbjct: 117 EKIMKLQQRKQTTSDAVVN 135 >gi|295707193|ref|YP_003600268.1| SNF2 family helicase [Bacillus megaterium DSM 319] gi|294804852|gb|ADF41918.1| SNF2 family helicase [Bacillus megaterium DSM 319] Length = 876 Score = 105 bits (262), Expect = 4e-21, Method: Composition-based stats. Identities = 33/212 (15%), Positives = 72/212 (33%), Gaps = 23/212 (10%) Query: 3 QYHKFQRELYCDLQGEN--IEAFNSASKTVKCLQLANGAVYYDEEKHWKEV--HDEKIKA 58 Y + + + + + + K L N Y +E K+ K + Sbjct: 650 LYQELVQGMLQETEEKTGFERKGIILQTLNKLKLLCNHPALYLKESAAKQTVRRSHKSEK 709 Query: 59 LEVIIEK--ANAAPIIVAYHFN---SDLAR-LQKAFPQGRT-------LDKDPCTIQEWN 105 + ++E ++ + L R L+K + ++ + ++ Sbjct: 710 IIELVESIRTQQESCLIFTQYIETGLMLQRTLEKEINEPVLFLHGSLSKEQRDEMVAQFQ 769 Query: 106 EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 + + G GLNL N ++ F WW+ Q +R + G + V Sbjct: 770 ARNKAIFILSLRAGGTGLNLT-AANHVIHFDRWWNPAVENQATDR-----AHRIGQNKFV 823 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 V+ I + TI+E + + + K + + L+ Sbjct: 824 HVHKFITRGTIEEKIDEVINQKQHLNNELIQG 855 >gi|302853754|ref|XP_002958390.1| hypothetical protein VOLCADRAFT_99672 [Volvox carteri f. nagariensis] gi|300256270|gb|EFJ40540.1| hypothetical protein VOLCADRAFT_99672 [Volvox carteri f. nagariensis] Length = 854 Score = 105 bits (262), Expect = 4e-21, Method: Composition-based stats. Identities = 40/204 (19%), Positives = 74/204 (36%), Gaps = 27/204 (13%) Query: 10 ELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDE----KIKALEVIIEK 65 +L D G+ EA + T + + + K + K++ L +++ Sbjct: 478 DLLLDPSGDAGEATAEGANTGR---TCSSSCLPSFSKQFTATGSHQAAGKMQVLSLLLSA 534 Query: 66 --ANAAPIIVAYHFNSDLARLQK-----------AFPQGRTLDKDPCTIQEWNE-GKIPL 111 A +V + L + + G +++ + +N+ G + Sbjct: 535 IAARGERCVVVSTSTATLDLVGQLVCKAQGLTTVRIDGGTSVEGRQTVVDNFNKLGMGQV 594 Query: 112 LFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLI 171 + G GLNL G LV + W+ QQ + RI + G + FVY L+ Sbjct: 595 FLLSTRAGGAGLNL-VGACHLVLYDSDWNPAMDQQAMARIW-----RDGQTKPCFVYRLL 648 Query: 172 AQNTIDELVLQRLRTKSTIQDLLL 195 TI+E V QR K+ + + Sbjct: 649 TTGTIEEKVYQRQLMKADLASATV 672 >gi|25027819|ref|NP_737873.1| chromodomain-containing helicase [Corynebacterium efficiens YS-314] gi|259506209|ref|ZP_05749111.1| DNA/RNA helicase [Corynebacterium efficiens YS-314] gi|23493102|dbj|BAC18073.1| putative chromodomain helicase [Corynebacterium efficiens YS-314] gi|259166186|gb|EEW50740.1| DNA/RNA helicase [Corynebacterium efficiens YS-314] Length = 1034 Score = 105 bits (262), Expect = 4e-21, Method: Composition-based stats. Identities = 33/213 (15%), Positives = 69/213 (32%), Gaps = 26/213 (12%) Query: 3 QYHKFQRELYCDLQGENIEAFNSASK--TVKCLQLANGAVYYDEEKHWKEVH----DEKI 56 Y ++ L + + Q+ N ++ + + K+ Sbjct: 799 LYKALVDDVQQQLSQRQGMSRKGLVLATITRIKQICNHPAHFLNDGSPLTLRGRHRSGKV 858 Query: 57 KALEVIIEKA--NAAPIIVAYHFNSDLARLQKAFPQ-----------GRTLDKDPCTIQE 103 +AL +++ A +++ + + L G + + Sbjct: 859 EALMDLLDDAVAQERRMLIFTQYTAFGQLLAPYLSDRLGVDIPFLHGGVSKLGRDRMVAR 918 Query: 104 WNEGK-IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFK 162 + G P + + G GLNL +I+V WW+ Q +R + G K Sbjct: 919 FQAGDGPPAMILSLKAGGTGLNLT-AASIVVHMDRWWNPAVENQATDR-----AFRIGQK 972 Query: 163 RAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 V VY +I T++E + L K + ++ Sbjct: 973 NNVDVYKMITAGTMEESIQDILDGKMHLASAIV 1005 >gi|307203835|gb|EFN82771.1| DNA repair and recombination protein RAD54-like [Harpegnathos saltator] Length = 679 Score = 105 bits (262), Expect = 4e-21, Method: Composition-based stats. Identities = 32/153 (20%), Positives = 57/153 (37%), Gaps = 18/153 (11%) Query: 56 IKALEVIIEKANAAPIIVAYHFNSDLARLQK----------AFPQGRTLDKDPCTIQEWN 105 + L I+ I++ ++ L +K T+ K + +N Sbjct: 439 LDCLLASIKTTTNDKIVLVSNYTQTLDLFEKLCHKRGYNYVRLDGTMTIKKRSKVVDNFN 498 Query: 106 EGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKR 163 + + G GLNL G N LV F W+ Q + R+ + G K+ Sbjct: 499 SESSSDFIFMLSSKAGGCGLNL-IGANRLVMFDPDWNPANDDQAMARVW-----RDGQKK 552 Query: 164 AVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 FVY ++ TI+E + QR K + +++ Sbjct: 553 PCFVYRFLSTGTIEEKIFQRQAHKKALSSTVVD 585 >gi|255561731|ref|XP_002521875.1| ATP binding protein, putative [Ricinus communis] gi|223538913|gb|EEF40511.1| ATP binding protein, putative [Ricinus communis] Length = 756 Score = 105 bits (262), Expect = 4e-21, Method: Composition-based stats. Identities = 27/158 (17%), Positives = 63/158 (39%), Gaps = 19/158 (12%) Query: 53 DEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQ----------KAFPQGRTLDKDPCT 100 K +AL ++ + + +++ + S L L+ + + + Sbjct: 580 SAKCRALAELLPELRRDGHKVLIFSQWTSMLDILEWTLDVIGLTYRRLDGSTPVTERQTI 639 Query: 101 IQEWNEG-KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQA 159 + +N I + G GLNL G + +V + ++ + +Q +R + Sbjct: 640 VDAFNNDTSIFACLLSTRAGGQGLNLT-GADTVVIHDMDFNPQIDRQAEDRC-----HRI 693 Query: 160 GFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 G + V +Y L+ + T+DE + + + K T+ +L + Sbjct: 694 GQTKPVTIYRLVTKGTVDENIYEIAKRKLTLDAAVLES 731 >gi|240952196|ref|XP_002399349.1| helicase, putative [Ixodes scapularis] gi|215490555|gb|EEC00198.1| helicase, putative [Ixodes scapularis] Length = 624 Score = 105 bits (262), Expect = 4e-21, Method: Composition-based stats. Identities = 29/158 (18%), Positives = 64/158 (40%), Gaps = 19/158 (12%) Query: 52 HDEKIKALEVIIEKANAAP--IIVAYHFNSDLARL---------QKAFPQGRTL--DKDP 98 K++ L+ ++ + +++ L L + GRT D+ Sbjct: 392 ASGKLRLLDCMLPELRRRKHKVLLFSQMTRVLDILEDYCHLRHFRHCRLDGRTKVEDRQL 451 Query: 99 CTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQ 158 N+ + + G G+NL GG+ +V F W+ + Q ++R + Sbjct: 452 QMHLFNNDPSYFVFLLSTRAGGLGINLT-GGDTVVLFDSDWNPQCDLQAMDRC-----HR 505 Query: 159 AGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 G R V VY L+ + T+++ +++R K ++ +++ Sbjct: 506 IGQTRPVVVYRLVTRGTVEQRMVERASAKRKLEKIIMQ 543 >gi|330803641|ref|XP_003289812.1| hypothetical protein DICPUDRAFT_36354 [Dictyostelium purpureum] gi|325080071|gb|EGC33642.1| hypothetical protein DICPUDRAFT_36354 [Dictyostelium purpureum] Length = 731 Score = 105 bits (262), Expect = 5e-21, Method: Composition-based stats. Identities = 35/157 (22%), Positives = 67/157 (42%), Gaps = 21/157 (13%) Query: 55 KIKALEVIIEKAN--AAPIIVAYHFNSDL---ARLQK-------AFPQGRTLDKDPCTIQ 102 K+ +E +I++ +++ ++ L RL K + D + Sbjct: 382 KLLFVESLIKQLKSVGEKLVLVSNYTQTLDVFERLCKKLSTDFLRLDGSVSSDTRQSLVD 441 Query: 103 EWN---EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQA 159 ++N K + + G G+NL GGN LV + W+ Q +ER+ + Sbjct: 442 KFNDQSNKKYQIFLLSAKAGGVGINL-IGGNHLVLYDPDWNPAIDIQAMERVW-----RE 495 Query: 160 GFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 G + VF+Y L + TI+E + QR K +I + +++ Sbjct: 496 GQNKPVFIYRLFSTGTIEEKIYQRQLMKESISNSIVD 532 >gi|157870556|ref|XP_001683828.1| DNA repair protein [Leishmania major strain Friedlin] gi|68126895|emb|CAJ04924.1| putative DNA repair protein [Leishmania major strain Friedlin] Length = 1092 Score = 105 bits (261), Expect = 5e-21, Method: Composition-based stats. Identities = 33/162 (20%), Positives = 67/162 (41%), Gaps = 20/162 (12%) Query: 49 KEVHDEKIKALEVIIEKA-NAAPIIVAYHFNSDLARLQKAFPQGR-----------TLDK 96 K +H K+ A+ IE+ ++V F S L L + + Q R TL + Sbjct: 919 KPLHGTKLDAIANYIEEVPKDEKVVVFSQFGSMLD-LTQYWLQRRSIRAVKLCGSLTLTQ 977 Query: 97 DPCTIQEW-NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTR 155 +Q + ++ + ++ + G GLNLQ N +V WW+ Q ++R Sbjct: 978 RQSVLQAFLHDQNVRVILISLKAGGEGLNLQV-ANHVVLTDPWWNPAVEMQAVQR----- 1031 Query: 156 QRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + G R V + +++++E ++ K + + ++ Sbjct: 1032 AHRIGQTRPVHAVRFVTEHSVEERMVDLQDKKMLVFEGTIDG 1073 >gi|330443433|ref|NP_009629.4| Rdh54p [Saccharomyces cerevisiae S288c] gi|329136720|tpg|DAA07193.2| TPA: Rdh54p [Saccharomyces cerevisiae S288c] Length = 958 Score = 105 bits (261), Expect = 5e-21, Method: Composition-based stats. Identities = 35/162 (21%), Positives = 60/162 (37%), Gaps = 20/162 (12%) Query: 48 WKEVHDEKIKALEVIIE---KANAAPIIVAYHFNSDLARLQKAFPQGR-----------T 93 + ++ K+K L ++E K ++V ++ L ++ Sbjct: 658 SRSLNSGKLKVLMTLLEGIRKGTKEKVVVVSNYTQTLDIIENLMNMAGMSHCRLDGSIPA 717 Query: 94 LDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGV 153 +D I S G GLNL G + L+ F W+ Q + RI Sbjct: 718 KQRDSIVTSFNRNPAIFGFLLSAKSGGVGLNL-VGASRLILFDNDWNPSVDLQAMSRI-- 774 Query: 154 TRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 + G K+ F+Y L+ IDE +LQR K+++ L Sbjct: 775 ---HRDGQKKPCFIYRLVTTGCIDEKILQRQLMKNSLSQKFL 813 >gi|290878090|emb|CBK39149.1| Rdh54p [Saccharomyces cerevisiae EC1118] Length = 924 Score = 105 bits (261), Expect = 5e-21, Method: Composition-based stats. Identities = 35/162 (21%), Positives = 60/162 (37%), Gaps = 20/162 (12%) Query: 48 WKEVHDEKIKALEVIIE---KANAAPIIVAYHFNSDLARLQKAFPQGR-----------T 93 + ++ K+K L ++E K ++V ++ L ++ Sbjct: 624 SRSLNSGKLKVLMTLLEGIRKGTKEKVVVVSNYTQTLDIIENLMNMAGMSHCRLDGSIPA 683 Query: 94 LDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGV 153 +D I S G GLNL G + L+ F W+ Q + RI Sbjct: 684 KQRDSIVTSFNRNPAIFGFLLSAKSGGVGLNL-VGASRLILFDNDWNPSVDLQAMSRI-- 740 Query: 154 TRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 + G K+ F+Y L+ IDE +LQR K+++ L Sbjct: 741 ---HRDGQKKPCFIYRLVTTGCIDEKILQRQLMKNSLSQKFL 779 >gi|292630874|sp|C7GQI8|RDH54_YEAS2 RecName: Full=DNA repair and recombination protein RDH54; AltName: Full=RAD homolog 54; AltName: Full=Recombination factor TID1; AltName: Full=Two hybrid interaction with DMC1 protein 1; Includes: RecName: Full=DNA topoisomerase; Includes: RecName: Full=Putative helicase gi|256271911|gb|EEU06936.1| Rdh54p [Saccharomyces cerevisiae JAY291] Length = 924 Score = 105 bits (261), Expect = 5e-21, Method: Composition-based stats. Identities = 35/162 (21%), Positives = 60/162 (37%), Gaps = 20/162 (12%) Query: 48 WKEVHDEKIKALEVIIE---KANAAPIIVAYHFNSDLARLQKAFPQGR-----------T 93 + ++ K+K L ++E K ++V ++ L ++ Sbjct: 624 SRSLNSGKLKVLMTLLEGIRKGTKEKVVVVSNYTQTLDIIENLMNMAGMSHCRLDGSIPA 683 Query: 94 LDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGV 153 +D I S G GLNL G + L+ F W+ Q + RI Sbjct: 684 KQRDSIVTSFNRNPAIFGFLLSAKSGGVGLNL-VGASRLILFDNDWNPSVDLQAMSRI-- 740 Query: 154 TRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 + G K+ F+Y L+ IDE +LQR K+++ L Sbjct: 741 ---HRDGQKKPCFIYRLVTTGCIDEKILQRQLMKNSLSQKFL 779 >gi|320166126|gb|EFW43025.1| lymphoid specific helicase variant4 [Capsaspora owczarzaki ATCC 30864] Length = 835 Score = 105 bits (261), Expect = 5e-21, Method: Composition-based stats. Identities = 26/154 (16%), Positives = 62/154 (40%), Gaps = 19/154 (12%) Query: 55 KIKALEVIIEKA--NAAPIIVAYHFNSDLARLQKAFP----------QGRTLDKDPCTIQ 102 K++ L+ ++ +++ L LQ F +L I+ Sbjct: 629 KLRLLDELLPALRRKGHKVLIFSQMTRMLDLLQDYFELRNTAVCRLDGAVSLADRQEQIR 688 Query: 103 EWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGF 161 +N + ++ + G G+NL + ++ + W+ + Q +R + G Sbjct: 689 SFNSDPEVFAFLLSTRAGGLGINL-IAADTVILYDSDWNPQADLQAQDRC-----HRIGQ 742 Query: 162 KRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 + V VY L+ NT+++ +++R K ++ L++ Sbjct: 743 TKPVIVYRLVTANTVEQRIIERAMAKRKLEKLVI 776 >gi|255718473|ref|XP_002555517.1| KLTH0G11132p [Lachancea thermotolerans] gi|238936901|emb|CAR25080.1| KLTH0G11132p [Lachancea thermotolerans] Length = 1339 Score = 105 bits (261), Expect = 5e-21, Method: Composition-based stats. Identities = 26/158 (16%), Positives = 62/158 (39%), Gaps = 19/158 (12%) Query: 53 DEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQK----------AFPQGRTLDKDPCT 100 K+K L+ ++ +++ + + +++ L+ Sbjct: 1174 STKLKKLDELLVDLKKGDHRVLIYFQMTKMMDLMEEYLTYRQYKHIRLDGSSKLEDRRDL 1233 Query: 101 IQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQA 159 + +W + I + + G G+NL + ++F+ W+ Q ++R + Sbjct: 1234 VHDWQTKPDIFIFLLSTRAGGLGINLT-AADTVIFYDSDWNPTIDSQAMDR-----AHRL 1287 Query: 160 GFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 G R V VY L+ + TI+E + R + K +Q +++ Sbjct: 1288 GQTRQVTVYRLLIRGTIEERMRDRAKQKEHVQQVVMEG 1325 >gi|224003427|ref|XP_002291385.1| predicted protein [Thalassiosira pseudonana CCMP1335] gi|220973161|gb|EED91492.1| predicted protein [Thalassiosira pseudonana CCMP1335] Length = 352 Score = 105 bits (261), Expect = 5e-21, Method: Composition-based stats. Identities = 43/223 (19%), Positives = 76/223 (34%), Gaps = 39/223 (17%) Query: 1 MKQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAV--YYDEEKHWKEVHDEKIKA 58 MK+ R + + +S +QL + Y + D K Sbjct: 134 MKEIDSIVRLSEAENNPDAEAGRSSVVLRNLVMQLRKICLHPYLFDFAE----SDIKSTT 189 Query: 59 LEVIIEKA---------------NAAPIIVAYHFNSDLARLQK----------AFPQGRT 93 LE +I + N + F S L L+ F G Sbjct: 190 LEELIATSGKLAVLDKLLISLFKNGNRTCIFSQFTSMLNILEDYCVLRGWKYVRFDGGTP 249 Query: 94 LDKDPCTIQEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERI 151 + I ++N K + S G G+NLQ + + + W+ + Q + R+ Sbjct: 250 RAQRNHIINQFNAPGSKDFIFLMSTKSGGLGINLQT-ADTCILYDSDWNPQPDLQAMARV 308 Query: 152 GVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 + G K+ V VY L++ TI+E V++R K + ++ Sbjct: 309 -----HRIGQKKVVHVYRLLSAGTIEERVVERAEKKLYLDKMV 346 >gi|307174075|gb|EFN64762.1| DNA repair and recombination protein RAD54-like [Camponotus floridanus] Length = 682 Score = 105 bits (261), Expect = 5e-21, Method: Composition-based stats. Identities = 32/153 (20%), Positives = 58/153 (37%), Gaps = 18/153 (11%) Query: 56 IKALEVIIEKANAAPIIVAYHFNSDLARLQK----------AFPQGRTLDKDPCTIQEWN 105 + L I+ I++ ++ L +K T+ K ++ +N Sbjct: 442 LDCLLASIKTTTNDKIVLVSNYTQTLDLFEKLCNKRSYNYVRLDGSMTIKKRSKVVENFN 501 Query: 106 EGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKR 163 + + G GLNL G N LV F W+ Q + R+ + G K+ Sbjct: 502 SDTSSDFIFMLSSKAGGCGLNL-IGANRLVMFDPDWNPANDDQAMARVW-----RDGQKK 555 Query: 164 AVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 FVY ++ TI+E + QR K + +++ Sbjct: 556 TCFVYRFLSTGTIEEKIFQRQAHKKALSSTVVD 588 >gi|302309194|ref|NP_986455.2| AGL212Wp [Ashbya gossypii ATCC 10895] gi|299788244|gb|AAS54279.2| AGL212Wp [Ashbya gossypii ATCC 10895] Length = 903 Score = 105 bits (261), Expect = 5e-21, Method: Composition-based stats. Identities = 32/166 (19%), Positives = 62/166 (37%), Gaps = 21/166 (12%) Query: 46 KHWKEVHDEKIKALEVIIEK----ANAAPIIVAYHFNSDLARLQKAFPQGRT-------- 93 + + K+K L ++ + ++ ++V ++ L + Sbjct: 608 RIAQSTTSGKLKVLMSLLHQIAHRSDNEKVVVISNYTQTLDIIGNLMSSASLSYLRLDGS 667 Query: 94 --LDKDPCTIQEWNEGK-IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 + + ++N + I S G GLNL G + L+ F W+ Q + R Sbjct: 668 TPTKERDAIVNDFNRSQTIFGFLLSAKSGGVGLNL-VGASRLILFDNDWNPSVDLQAMSR 726 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 I + G K+ F+Y L+ IDE + QR K+ + L+ Sbjct: 727 I-----HRDGQKKPCFIYRLVTTGCIDEKIFQRQLMKNNLSKKFLD 767 >gi|242017030|ref|XP_002428996.1| lymphoid specific helicase, putative [Pediculus humanus corporis] gi|212513842|gb|EEB16258.1| lymphoid specific helicase, putative [Pediculus humanus corporis] Length = 806 Score = 105 bits (261), Expect = 5e-21, Method: Composition-based stats. Identities = 32/160 (20%), Positives = 64/160 (40%), Gaps = 19/160 (11%) Query: 53 DEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQK----------AFPQGRTLDKDPCT 100 K+ L+ ++ K +I+ F L L+ + K Sbjct: 559 SGKMLVLDALLSKLKSRGHKVIIFSFFKVVLDILEDYVLLRDYQYSRLDGDLNIPKRNEE 618 Query: 101 IQEW-NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQA 159 IQ++ + +I + S G G+NL + ++F+ W+ + Q +R + Sbjct: 619 IQKFMDNPEIFVFLITMRSGGLGINLT-AADTVIFYDSDWNPTINLQSQDRC-----HRI 672 Query: 160 GFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 G + V +Y L + TIDE +++R K ++ ++L K Sbjct: 673 GQSKPVMIYRLCVKGTIDEKIIERANAKRRLEKMILQKGK 712 >gi|50311185|ref|XP_455616.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140] gi|49644752|emb|CAG98324.1| KLLA0F11814p [Kluyveromyces lactis] Length = 931 Score = 105 bits (261), Expect = 5e-21, Method: Composition-based stats. Identities = 38/162 (23%), Positives = 63/162 (38%), Gaps = 20/162 (12%) Query: 50 EVHDEKIKALEVIIEKAN---AAPIIVAYHFNSDLARLQK---------AFPQGRTLDKD 97 + K++ L ++ + ++V ++ L ++ A G T K Sbjct: 631 KFTSGKLRILLSLLHELKTKTDEKVVVISNYTQTLDIIEGHCSSEGYTSARLDGSTATKT 690 Query: 98 PCTI--QEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTR 155 I N+ I + S G GLNL G + LV F W+ Q + RI Sbjct: 691 RDQIVTSFNNDPSIFVFLLSAKSGGVGLNL-IGASRLVLFDNDWNPSIDLQAMSRI---- 745 Query: 156 QRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + G +R F+Y L+ IDE +LQR K + L++ Sbjct: 746 -HRDGQRRPCFIYRLVTTGCIDEKILQRQLMKIALSKKFLDS 786 >gi|304438573|ref|ZP_07398512.1| Snf2 family protein [Selenomonas sp. oral taxon 149 str. 67H29BP] gi|304368411|gb|EFM22097.1| Snf2 family protein [Selenomonas sp. oral taxon 149 str. 67H29BP] Length = 819 Score = 105 bits (261), Expect = 5e-21, Method: Composition-based stats. Identities = 35/165 (21%), Positives = 66/165 (40%), Gaps = 22/165 (13%) Query: 46 KHWKEVHDEKIKALE----VIIEKANAAPIIVAYHFNSDLARLQK---------AFPQGR 92 +H K + II++ +IV F L +L++ + G Sbjct: 644 RHSTSCESCKYDLFKLYTPNIIKEH--KKLIVFCQFPKILKKLKRWCDSNHWSTFYIDGN 701 Query: 93 TLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIG 152 T ++ I + + K + F + G GLNL ++ + WW+ +Q +RI Sbjct: 702 TNNR-ERIISLFEQSKEGIFFISLKAGGVGLNLT-SAQFVIIYEPWWNPSAERQASDRI- 758 Query: 153 VTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + G + VF+Y+ I +TI+E +++ K I + A Sbjct: 759 ----YRIGQDKPVFIYHFIVNDTIEEKIIELQDKKKKIYSDFIAA 799 >gi|88809531|ref|ZP_01125039.1| hypothetical protein WH7805_10274 [Synechococcus sp. WH 7805] gi|88786750|gb|EAR17909.1| hypothetical protein WH7805_10274 [Synechococcus sp. WH 7805] Length = 1070 Score = 105 bits (261), Expect = 5e-21, Method: Composition-based stats. Identities = 37/217 (17%), Positives = 75/217 (34%), Gaps = 36/217 (16%) Query: 8 QRELYCDLQGENIEAFNSA----------SKTVKCLQLANG---AVYYDEEKHWKEVHDE 54 Q+ LY ++A A + Q+ N A+ + Sbjct: 832 QKSLYAKTVENTLDAIARAPRGKRHGQVLGLLTRLKQICNHPALALKEEVAGDDFLQRSV 891 Query: 55 KIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGR------------TLDKDPCT 100 K++ LE I+E+ A ++ F ++ L + + Q R + + Sbjct: 892 KLQRLEEILEEVIAAGDRALLFTQF-AEWGHLLQGYLQRRWRSEVPFLSGSTSKGERQAM 950 Query: 101 IQEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQ 158 + + E L + G GLNL + + WW+ Q +R + Sbjct: 951 VDRFQEDPRGPQLFLLSLKAGGVGLNLTRASH-VFHIDRWWNPAVENQATDR-----AYR 1004 Query: 159 AGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 G V V+ I +++E + + +R KS + + ++ Sbjct: 1005 IGQTNRVMVHKFITSGSVEEKIDRMIREKSRLAEDIV 1041 >gi|153791718|ref|NP_001093467.1| probable global transcription activator SNF2L1 [Danio rerio] gi|148725854|emb|CAN88075.1| novel protein similar to SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5 (smarca5) [Danio rerio] gi|148726278|emb|CAN88255.1| novel protein similar to SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5 (smarca5) [Danio rerio] Length = 1036 Score = 105 bits (261), Expect = 5e-21, Method: Composition-based stats. Identities = 41/230 (17%), Positives = 87/230 (37%), Gaps = 40/230 (17%) Query: 1 MKQY---HKFQRELYCDLQGENIEAFNSASKTVK------CLQL---ANGAVYYD----- 43 +K Y K QRE Y + ++I+ NSA K K +QL N +D Sbjct: 372 VKIYLGLSKMQREWYTRILMKDIDILNSAGKMDKMRLLNILMQLRKCCNHPYLFDGAEPG 431 Query: 44 ---EEKHWKEVHDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQK----------AF 88 ++ K+ AL+ ++ + + +++ L L+ Sbjct: 432 PPYTTDTHLVINSGKMVALDKLLPKVQEQGSRVLIFSQMTRVLDILEDYCMWRGFEYCRL 491 Query: 89 PQGRTLDKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 + I +N + + G G+NL ++++ + W+ + Q Sbjct: 492 DGNTPHEAREQAIDAFNAPNSSKFIFMLSTRAGGLGINL-ATADVVILYDSDWNPQVDLQ 550 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 ++R + G ++ V V+ LI NT++E +++R K + +++ Sbjct: 551 AMDR-----AHRIGQRKPVKVFRLITDNTVEERIVERAEMKLRLDSIVIQ 595 >gi|66808133|ref|XP_637789.1| SNF2-related domain-containing protein [Dictyostelium discoideum AX4] gi|60466223|gb|EAL64285.1| SNF2-related domain-containing protein [Dictyostelium discoideum AX4] Length = 2005 Score = 105 bits (261), Expect = 5e-21, Method: Composition-based stats. Identities = 32/151 (21%), Positives = 59/151 (39%), Gaps = 20/151 (13%) Query: 60 EVIIEKANAAPIIVAYHFNSDLARLQK-------------AFPQGRTLDKDPCTIQEWN- 105 E I E N +++ S L ++ K + ++N Sbjct: 1771 ETINESTNQHRVLIFAQMKSMLDIVENELFKKHLPSVTYLRMDGSVETMKRHSIVNQFNS 1830 Query: 106 EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 + I +L G GLNL G + ++F W+ + Q ++R + G K+ V Sbjct: 1831 DPTIDVLLLTTHVGGLGLNLT-GADTVIFLEHDWNPMKDLQAMDR-----AHRIGQKKVV 1884 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 VY LI T++E ++ + K I + ++N Sbjct: 1885 NVYRLITSGTLEEKIMGLQKFKLNIANTVIN 1915 >gi|33866892|ref|NP_898451.1| SNF2 helicase-like protein [Synechococcus sp. WH 8102] gi|33639493|emb|CAE08877.1| SNF2 helicase homolog [Synechococcus sp. WH 8102] Length = 1063 Score = 105 bits (261), Expect = 5e-21, Method: Composition-based stats. Identities = 30/188 (15%), Positives = 64/188 (34%), Gaps = 24/188 (12%) Query: 26 ASKTVKCLQLANGAVYYDEEKHWKEVH---DEKIKALEVIIEK--ANAAPIIVAYHFN-- 78 + Q+ N E + K++ LE I+++ ++ F Sbjct: 858 LGLLTRLKQICNHPALALSENAVDDGFLGRSAKLQRLEEILDEVIEAGDRALLFTQFAEW 917 Query: 79 -SDLAR-LQKAFP-------QGRTLDKDPCTIQEWNEG--KIPLLFAHPASCGHGLNLQY 127 L +Q+ + G ++ + + E L + G GLNL Sbjct: 918 GHLLQSWMQQRWKADVPFLHGGTRKNERQAMVDRFQEDPRGPQLFLLSLKAGGVGLNLTR 977 Query: 128 GGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTK 187 + + WW+ Q +R + G V V+ I +++E + + +R K Sbjct: 978 ASH-VFHIDRWWNPAVENQATDR-----AYRIGQTNRVMVHKFITSGSVEEKIDRMIREK 1031 Query: 188 STIQDLLL 195 S + + ++ Sbjct: 1032 SRLAEDVI 1039 >gi|302824179|ref|XP_002993735.1| hypothetical protein SELMODRAFT_187576 [Selaginella moellendorffii] gi|300138459|gb|EFJ05227.1| hypothetical protein SELMODRAFT_187576 [Selaginella moellendorffii] Length = 1827 Score = 105 bits (261), Expect = 6e-21, Method: Composition-based stats. Identities = 44/251 (17%), Positives = 87/251 (34%), Gaps = 60/251 (23%) Query: 1 MKQYHKF--------QRELYCDLQGENIEAFNSAS------KTVKCLQLANGAVYYDEEK 46 +K Y KF + G + N+++ ++ + V + Sbjct: 1504 LKLYEKFAFSQAKKNVATMVEAYGGNADDRGNTSAPTHVFQALQYLRKVCSHPVLVLDGP 1563 Query: 47 HWKEVHDE-------------KIKALEVIIEK-------------ANAAPIIVAYHFNSD 80 + V++E K+ AL I+E+ +++ Sbjct: 1564 LSENVNEENGSMDIHDIQNSPKLLALRDILEECGIGQCNGDNSTAGGQHRVLIFAQLKGF 1623 Query: 81 LARLQK-------------AFPQGRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQ 126 L ++K + K ++ +N + I +L G GLNL Sbjct: 1624 LDIIEKDLFQTHMKSVTYMRLDGSVDVSKRFEIVKAFNSDPTIDVLLLTTHVGGLGLNLT 1683 Query: 127 YGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRT 186 + +VF W+ Q ++R + G +R V V+ LI + T++E V+ R Sbjct: 1684 -AADTVVFMEHDWNPMRDLQAMDR-----SHRLGQRRVVNVHRLIMRGTLEEKVMNLQRF 1737 Query: 187 KSTIQDLLLNA 197 K +I + ++NA Sbjct: 1738 KLSIANTVINA 1748 >gi|56750675|ref|YP_171376.1| putative SNF2 helicase [Synechococcus elongatus PCC 6301] gi|56685634|dbj|BAD78856.1| putative SNF2 helicase [Synechococcus elongatus PCC 6301] Length = 1019 Score = 105 bits (261), Expect = 6e-21, Method: Composition-based stats. Identities = 34/213 (15%), Positives = 71/213 (33%), Gaps = 26/213 (12%) Query: 3 QYHKFQRELYCDLQGEN--IEAFNSASKTVKCLQLANGAVYYDEE---KHWKEVHDEKIK 57 +Y E +++ + + QL N E+ K++ Sbjct: 781 RYQVLVNEALANIEASEGIQRRGQILALLTRLKQLCNHPSLLLEKPKLDPNFGDRSAKLQ 840 Query: 58 ALEVIIEKAN--AAPIIVAYHF----------NSDLARLQKAFPQGRTLDKDPCTI--QE 103 L ++ + +V F + + F G T D + + Sbjct: 841 RLLEMLAELTDAGDRALVFTQFAGWGSLLQQFLQEQLGREVLFLSGSTKKGDRQQMVDRF 900 Query: 104 WNEGKIP-LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFK 162 N+ + P + + G GLNL N + + WW+ Q +R + G + Sbjct: 901 QNDPQAPAIFILSLKAGGVGLNLTK-ANHVFHYDRWWNPAVENQATDR-----AFRIGQR 954 Query: 163 RAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 R V V+ + T++E + Q + +K + ++ Sbjct: 955 RNVQVHKFVCAGTLEEKIDQMIASKQALAQQIV 987 >gi|81299683|ref|YP_399891.1| DEAD/DEAH box helicase-like [Synechococcus elongatus PCC 7942] gi|81168564|gb|ABB56904.1| DEAD/DEAH box helicase-like [Synechococcus elongatus PCC 7942] Length = 1019 Score = 105 bits (261), Expect = 6e-21, Method: Composition-based stats. Identities = 34/213 (15%), Positives = 71/213 (33%), Gaps = 26/213 (12%) Query: 3 QYHKFQRELYCDLQGEN--IEAFNSASKTVKCLQLANGAVYYDEE---KHWKEVHDEKIK 57 +Y E +++ + + QL N E+ K++ Sbjct: 781 RYQVLVNEALANIEASEGIQRRGQILALLTRLKQLCNHPSLLLEKPKLDPNFGDRSAKLQ 840 Query: 58 ALEVIIEKAN--AAPIIVAYHF----------NSDLARLQKAFPQGRTLDKDPCTI--QE 103 L ++ + +V F + + F G T D + + Sbjct: 841 RLLEMLAELTDAGDRALVFTQFAGWGSLLQQFLQEQLGREVLFLSGSTKKGDRQQMVDRF 900 Query: 104 WNEGKIP-LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFK 162 N+ + P + + G GLNL N + + WW+ Q +R + G + Sbjct: 901 QNDPQAPAIFILSLKAGGVGLNLTK-ANHVFHYDRWWNPAVENQATDR-----AFRIGQR 954 Query: 163 RAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 R V V+ + T++E + Q + +K + ++ Sbjct: 955 RNVQVHKFVCAGTLEEKIDQMIASKQALAQQIV 987 >gi|213625823|gb|AAI71410.1| Helicase, lymphoid-specific [Danio rerio] gi|213627472|gb|AAI71408.1| Helicase, lymphoid-specific [Danio rerio] gi|220677979|emb|CAX14759.1| helicase, lymphoid-specific [Danio rerio] Length = 853 Score = 105 bits (261), Expect = 6e-21, Method: Composition-based stats. Identities = 29/139 (20%), Positives = 57/139 (41%), Gaps = 17/139 (12%) Query: 68 AAPIIVAYHFNSDLARLQ-----KAFPQGRT------LDKDPCTIQEWNEGKIPLLFAHP 116 +++ S L L + + R D+D + ++ ++ L Sbjct: 631 GHKVLIFSQMTSILDILMDYCYLRGYEYSRLDGSMSYADRDENMKKFSSDPEVFLFLLST 690 Query: 117 ASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTI 176 + G G+NL + ++ F W+ + Q +R + G + V VY LI NTI Sbjct: 691 RAGGLGINLT-SADTVIIFDSDWNPQADLQAQDRC-----HRIGQTKPVVVYRLITANTI 744 Query: 177 DELVLQRLRTKSTIQDLLL 195 DE +L+R K ++ +++ Sbjct: 745 DEKILERASAKRKLEKMVI 763 >gi|221117267|ref|XP_002154001.1| PREDICTED: similar to yeast Swi2/Snf2-Like family member (ssl-1), partial [Hydra magnipapillata] Length = 2164 Score = 105 bits (261), Expect = 6e-21, Method: Composition-based stats. Identities = 35/183 (19%), Positives = 73/183 (39%), Gaps = 27/183 (14%) Query: 28 KTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQ 85 KT+ +Q E + K++AL ++ +++ L L+ Sbjct: 1247 KTMSLIQF--------PETRLVQYDCGKLQALNDLLRHLKIGKHRVLIFTQMTKMLDVLE 1298 Query: 86 KAF---------PQGRTLDKDPCTI-QEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVF 134 + G T + + + +N + KI + S G G+NL G + +VF Sbjct: 1299 RFLNYHGYIYLRLDGTTKVEQRQILMERFNQDNKIFIFILSTRSGGLGINLT-GADTVVF 1357 Query: 135 FSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 + W+ Q +R + G R V +Y LI++ T++E +L++ + K + ++ Sbjct: 1358 YDSDWNPTMDAQAQDRC-----HRIGQTRDVHIYRLISERTVEENILKKAQQKRLLGNIA 1412 Query: 195 LNA 197 + Sbjct: 1413 IEG 1415 >gi|332024911|gb|EGI65099.1| DNA repair and recombination protein RAD54-like protein [Acromyrmex echinatior] Length = 681 Score = 105 bits (261), Expect = 6e-21, Method: Composition-based stats. Identities = 32/153 (20%), Positives = 57/153 (37%), Gaps = 18/153 (11%) Query: 56 IKALEVIIEKANAAPIIVAYHFNSDLARLQK----------AFPQGRTLDKDPCTIQEWN 105 + L I+ I++ ++ L +K T+ K + +N Sbjct: 441 LDCLLASIKTTTNDKIVLVSNYTQTLDLFEKLCHKRSYNYVRLDGTMTIKKRAKVVDNFN 500 Query: 106 EGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKR 163 + + G GLNL G N LV F W+ Q + R+ + G K+ Sbjct: 501 SDSSNDFIFMLSSKAGGCGLNL-IGANRLVMFDPDWNPANDDQAMARVW-----RDGQKK 554 Query: 164 AVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 FVY ++ TI+E + QR K + +++ Sbjct: 555 PCFVYRFLSTGTIEEKIFQRQAHKKALSSTVVD 587 >gi|302822093|ref|XP_002992706.1| hypothetical protein SELMODRAFT_186944 [Selaginella moellendorffii] gi|300139447|gb|EFJ06187.1| hypothetical protein SELMODRAFT_186944 [Selaginella moellendorffii] Length = 1825 Score = 105 bits (261), Expect = 6e-21, Method: Composition-based stats. Identities = 44/251 (17%), Positives = 87/251 (34%), Gaps = 60/251 (23%) Query: 1 MKQYHKF--------QRELYCDLQGENIEAFNSAS------KTVKCLQLANGAVYYDEEK 46 +K Y KF + G + N+++ ++ + V + Sbjct: 1502 LKLYEKFAFSQAKKNVATMVEAYGGNADDRGNTSAPTHVFQALQYLRKVCSHPVLVLDGP 1561 Query: 47 HWKEVHDE-------------KIKALEVIIEK-------------ANAAPIIVAYHFNSD 80 + V++E K+ AL I+E+ +++ Sbjct: 1562 LSENVNEENGSMDIHDIQNSPKLLALRDILEECGIGQCNGDNSTAGGQHRVLIFAQLKGF 1621 Query: 81 LARLQK-------------AFPQGRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQ 126 L ++K + K ++ +N + I +L G GLNL Sbjct: 1622 LDIIEKDLFQTHMKSVTYMRLDGSVDVSKRFEIVKAFNSDPTIDVLLLTTHVGGLGLNLT 1681 Query: 127 YGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRT 186 + +VF W+ Q ++R + G +R V V+ LI + T++E V+ R Sbjct: 1682 -AADTVVFMEHDWNPMRDLQAMDR-----SHRLGQRRVVNVHRLIMRGTLEEKVMNLQRF 1735 Query: 187 KSTIQDLLLNA 197 K +I + ++NA Sbjct: 1736 KLSIANTVINA 1746 >gi|47575794|ref|NP_001001241.1| RAD54-like [Xenopus (Silurana) tropicalis] gi|45708870|gb|AAH67986.1| RAD54-like (S. cerevisiae) [Xenopus (Silurana) tropicalis] Length = 742 Score = 105 bits (261), Expect = 6e-21, Method: Composition-based stats. Identities = 33/168 (19%), Positives = 67/168 (39%), Gaps = 21/168 (12%) Query: 44 EEKHWKEVHDEKIKALEVIIE---KANAAPIIVAYHFNSDLARLQK----------AFPQ 90 K + K+ L+ I+ ++ +++ ++ L +K Sbjct: 484 STKSVEPQLSGKMLVLDYILAVTRSTSSDKVVLVSNYTQTLDLFEKLCRTRRYLYVRLDG 543 Query: 91 GRTLDKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMI 148 ++ K ++ +N P + + G GLNL G N LV F W+ +Q + Sbjct: 544 TMSIKKRAKIVERFNSPSSPEFIFMLSSKAGGCGLNL-IGANRLVMFDPDWNPANDEQAM 602 Query: 149 ERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 R+ + G K+ F+Y L++ TI+E + QR K + +++ Sbjct: 603 ARVW-----RDGQKKTCFIYRLLSTGTIEEKIFQRQTHKKALSSCVVD 645 >gi|328769968|gb|EGF80011.1| hypothetical protein BATDEDRAFT_35332 [Batrachochytrium dendrobatidis JAM81] Length = 2044 Score = 104 bits (260), Expect = 6e-21, Method: Composition-based stats. Identities = 36/200 (18%), Positives = 73/200 (36%), Gaps = 22/200 (11%) Query: 13 CDLQGENIEAFNSASKTVKCLQLA--NGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAP 70 +G +I ++ K + QL G + H + + + Sbjct: 1775 LKAEGRSINDVENSPKIMALQQLLKDCGIGMTNASNHSEGSSSMVLTDSVAGTSATSPHR 1834 Query: 71 IIVAYHFNSDLARL-----QKAFP-------QGRT--LDKDPCTIQEWNEGKIPLLFAHP 116 +++ L + +K P G T + + + + I +L Sbjct: 1835 VLIFAQVKPMLDIIENDLFKKHMPSVTYMRLDGTTDGIKRHELVTKFNQDPSIDVLLLTT 1894 Query: 117 ASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTI 176 G GLNL G + ++F W+ + Q ++R+ + G KR V VY LI + T+ Sbjct: 1895 HVGGLGLNLT-GADTVIFVEHDWNPMKDLQAMDRV-----HRIGQKRVVNVYRLITRGTL 1948 Query: 177 DELVLQRLRTKSTIQDLLLN 196 +E ++ + K + ++N Sbjct: 1949 EEKIMGLQKFKLNLASSVIN 1968 >gi|149174125|ref|ZP_01852753.1| swi/snf family helicase_2 [Planctomyces maris DSM 8797] gi|148847105|gb|EDL61440.1| swi/snf family helicase_2 [Planctomyces maris DSM 8797] Length = 642 Score = 104 bits (260), Expect = 6e-21, Method: Composition-based stats. Identities = 41/206 (19%), Positives = 73/206 (35%), Gaps = 27/206 (13%) Query: 3 QYHKFQRELYCDLQ--GENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 Y +++ L G++I + ++ Q+ N K+ LE Sbjct: 407 AYETAEKDGVIQLNEMGDSITVQHVFELVLRLKQITNF--------DPVTGDSCKLDRLE 458 Query: 61 VIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTL--------DKDPCTIQEWN-EGKI 109 +E+ A+ I+ + L + K + TL + + ++ + Sbjct: 459 ADMEEIAASGGKAILFSQWTKPLDFMAKRLERFGTLVYHGGIPTKQREPILDQFKHDPDS 518 Query: 110 PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYY 169 LL + GLNLQ+ G + F WW+ Q I R + G K V V Sbjct: 519 HLLLMSYGTGAVGLNLQFAG-YVFLFDRWWNPAIEDQAINR-----AHRIGQKTQVIVTK 572 Query: 170 LIAQNTIDELVLQRLRTKSTIQDLLL 195 + NTI+E + L K + +L Sbjct: 573 FVCNNTIEERIDMVLEQKRELFRSIL 598 >gi|294656433|ref|XP_002770263.1| DEHA2D05456p [Debaryomyces hansenii CBS767] gi|199431470|emb|CAR65619.1| DEHA2D05456p [Debaryomyces hansenii] Length = 838 Score = 104 bits (260), Expect = 6e-21, Method: Composition-based stats. Identities = 31/150 (20%), Positives = 61/150 (40%), Gaps = 19/150 (12%) Query: 59 LEVIIEKANAAPIIVAYHFNSDLARLQK----------AFPQGRTLDKDPCTIQEWN--E 106 L I + N +++ ++ L ++K ++K + +N E Sbjct: 604 LHKIRTETNDKIVLI-SNYTQTLDLIEKMCRYKKYANVRLDGTMNINKRQKLVDRFNDPE 662 Query: 107 GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVF 166 G + + G G+NL G N L+ W+ QQ + R+ + G K+ F Sbjct: 663 GSEFIFLLSSKAGGCGINL-IGANRLILIDPDWNPASDQQALARVW-----RDGQKKDCF 716 Query: 167 VYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 +Y I+ TI+E + QR K ++ +++ Sbjct: 717 IYRFISTGTIEEKIFQRQSMKLSLSSCVVD 746 >gi|164425176|ref|XP_962568.2| hypothetical protein NCU06306 [Neurospora crassa OR74A] gi|157070819|gb|EAA33332.2| conserved hypothetical protein [Neurospora crassa OR74A] Length = 857 Score = 104 bits (260), Expect = 6e-21, Method: Composition-based stats. Identities = 38/224 (16%), Positives = 77/224 (34%), Gaps = 45/224 (20%) Query: 9 RELYCDLQGENIEAFNSASKTVK----------CLQLANGAVYYDEEKHWKEVHDEKIKA 58 +++ DL E I+ + K +QL + D+ I Sbjct: 550 QDMEVDLDAEEIKRAQTLDLAKKEISNKKLGNPLMQLRLVCNSPHNFYNPWSNSDQPID- 608 Query: 59 LEVIIEKAN---------------AAPIIVAYHFNSDLARLQK-----------AFPQGR 92 E I+ + I++ F + L L++ G Sbjct: 609 -ESIVTASGKMLLLDRLLPALFERGHKILIFSQFKTQLDILEEYCRELRSWDVCRIDGGV 667 Query: 93 TLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERI 151 D I+++N + + + + G G+NL + ++ F W+ ++ Q +R Sbjct: 668 AQDDRRAQIEQFNTDPDVKIFLLSTRAGGQGINL-ASADTVILFDSDWNPQQDLQAQDRC 726 Query: 152 GVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 + G R V VY L + T++E +L K ++ L++ Sbjct: 727 -----HRIGQTRPVVVYRLATKGTVEEELLMSADAKRRLEKLVI 765 >gi|79748111|ref|NP_001032178.1| helicase, lymphoid-specific [Danio rerio] gi|52001265|gb|AAU21503.1| PASG [Danio rerio] Length = 853 Score = 104 bits (260), Expect = 6e-21, Method: Composition-based stats. Identities = 28/139 (20%), Positives = 57/139 (41%), Gaps = 17/139 (12%) Query: 68 AAPIIVAYHFNSDLARLQ-----KAFPQGRT------LDKDPCTIQEWNEGKIPLLFAHP 116 +++ S L L + + R D+D + ++ ++ L Sbjct: 631 GHKVLIFSQMTSILDILMDYCYLRGYEYSRLDGSMSYADRDENMKKFSSDPEVFLFLLST 690 Query: 117 ASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTI 176 + G G+NL + ++ F W+ + Q +R + G + V V+ LI NTI Sbjct: 691 RAGGLGINLT-SADTVIIFDSDWNPQADLQAQDRC-----HRIGQTKPVVVHRLITANTI 744 Query: 177 DELVLQRLRTKSTIQDLLL 195 DE +L+R K ++ +++ Sbjct: 745 DEKILERASAKRKLEKMVI 763 >gi|167527295|ref|XP_001747980.1| hypothetical protein [Monosiga brevicollis MX1] gi|163773729|gb|EDQ87367.1| predicted protein [Monosiga brevicollis MX1] Length = 760 Score = 104 bits (260), Expect = 6e-21, Method: Composition-based stats. Identities = 31/161 (19%), Positives = 64/161 (39%), Gaps = 18/161 (11%) Query: 56 IKALEVIIEKANAAPIIVAYHFNSDL---ARL--QKAFPQGRT-----LDKDPCTIQEWN 105 + A+ +++ +++ ++ L RL Q+ + R + K + +N Sbjct: 510 VDAMLAMLKSTTDEKVVLISNYTQTLDLFERLCRQRRYKYVRLDGTMSIKKRQKVVDHFN 569 Query: 106 EGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKR 163 + + G G+NL G + L+ W+ Q + R QR+ Sbjct: 570 APDSDDFIFMLSSKAGGCGINL-IGASRLILTDPDWNPASDAQALARCWRDGQRRI---- 624 Query: 164 AVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIH 204 +VY L+A TI+E +L R K+ + D +++ + H Sbjct: 625 -TYVYRLVATGTIEEKILARQAHKTALSDCVIDEAEDVQRH 664 >gi|159902591|ref|YP_001549935.1| SNF2 family DNA/RNA helicase [Prochlorococcus marinus str. MIT 9211] gi|159887767|gb|ABX07981.1| Superfamily II DNA/RNA helicase, SNF2 family [Prochlorococcus marinus str. MIT 9211] Length = 1067 Score = 104 bits (260), Expect = 6e-21, Method: Composition-based stats. Identities = 37/191 (19%), Positives = 72/191 (37%), Gaps = 24/191 (12%) Query: 25 SASKTVKCLQLANGAVYYDEEKHWKEVH---DEKIKALEVIIEK--ANAAPIIVAYHFNS 79 + + Q+ N +EK+ + K++ LE +++ A ++ F Sbjct: 860 TLGLLTRLKQICNHPALALKEKNISDDFGIRSTKLQRLEELLDVIFATEDRALLFTQFAE 919 Query: 80 DLARLQKAFPQ------------GRTLDKDPCTIQEWNEGKIP-LLFAHPASCGHGLNLQ 126 LQ + R +D+ Q + + P L + G GLNL Sbjct: 920 WGHLLQAYLEKKWGHSILFLHGGTRKIDRQSMVDQFQEDPRGPKLFLLSLKAGGIGLNLT 979 Query: 127 YGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRT 186 N ++ WW+ Q +R + G K +V V+ IA +++E + Q + Sbjct: 980 R-ANHVLHIDRWWNPAVENQATDR-----AYRIGQKNSVMVHKFIATGSVEEKIDQMITE 1033 Query: 187 KSTIQDLLLNA 197 KS + + ++ A Sbjct: 1034 KSKLAENIIGA 1044 >gi|261334500|emb|CBH17494.1| DNA repair and recombination protein RAD54,putative [Trypanosoma brucei gambiense DAL972] Length = 1037 Score = 104 bits (260), Expect = 6e-21, Method: Composition-based stats. Identities = 27/151 (17%), Positives = 59/151 (39%), Gaps = 18/151 (11%) Query: 58 ALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRT----------LDKDPCTIQEWNEG 107 L+ + + +++ +F L + + + + + +N Sbjct: 707 MLDELCSNGDHDKLVIVSNFTQTLDVIAAMCKTKKISFFQLDGSMPIKRRQEVVDRFNVP 766 Query: 108 KIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 + + G GLNL G N L+ F W+ Q + R+ + G K+ V Sbjct: 767 NSQEIVFLLSSKAGGVGLNL-IGANRLILFDPDWNPANDAQAMGRVW-----RDGQKKRV 820 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 F+Y L++ +I+E + QR +K + +++ Sbjct: 821 FIYRLLSTGSIEEKIYQRQVSKQGLSANVVD 851 >gi|71755407|ref|XP_828618.1| DNA repair/recombination protein RAD54 [Trypanosoma brucei TREU927] gi|70834004|gb|EAN79506.1| DNA repair and recombination protein RAD54, putative [Trypanosoma brucei] Length = 1037 Score = 104 bits (260), Expect = 6e-21, Method: Composition-based stats. Identities = 27/151 (17%), Positives = 59/151 (39%), Gaps = 18/151 (11%) Query: 58 ALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRT----------LDKDPCTIQEWNEG 107 L+ + + +++ +F L + + + + + +N Sbjct: 707 MLDELCSNGDHDKLVIVSNFTQTLDVIAAMCKTKKISFFQLDGSMPIKRRQEVVDRFNVP 766 Query: 108 KIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 + + G GLNL G N L+ F W+ Q + R+ + G K+ V Sbjct: 767 NSQEIVFLLSSKAGGVGLNL-IGANRLILFDPDWNPANDAQAMGRVW-----RDGQKKRV 820 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 F+Y L++ +I+E + QR +K + +++ Sbjct: 821 FIYRLLSTGSIEEKIYQRQVSKQGLSANVVD 851 >gi|302780671|ref|XP_002972110.1| hypothetical protein SELMODRAFT_412612 [Selaginella moellendorffii] gi|300160409|gb|EFJ27027.1| hypothetical protein SELMODRAFT_412612 [Selaginella moellendorffii] Length = 1011 Score = 104 bits (260), Expect = 6e-21, Method: Composition-based stats. Identities = 40/156 (25%), Positives = 68/156 (43%), Gaps = 19/156 (12%) Query: 59 LEVIIEKANAAPIIVAYHFNSDLARL-----QKAFPQGRT-----LDKDPCTIQEWNEGK 108 LE + +K N ++V ++ L ++ +P R + K +Q++N+ Sbjct: 472 LENLRKKTNDRIVLV-SNYTQTLDLFAQLCRERNYPYVRLDGSTSIGKRQKLVQKFNDPS 530 Query: 109 IP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVF 166 + G GLNL GGN LV F W+ +Q R+ + G K+ V+ Sbjct: 531 QNEFAFLLSSKAGGCGLNL-IGGNRLVLFDPDWNPANDKQAAARVW-----RDGQKKRVY 584 Query: 167 VYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKET 202 +Y +A TI+E V QR +K +Q ++ K E Sbjct: 585 IYRFLATGTIEEKVYQRQMSKEGLQKVISGDSKAEV 620 >gi|194207506|ref|XP_001915622.1| PREDICTED: similar to RAD54-like protein [Equus caballus] Length = 755 Score = 104 bits (260), Expect = 7e-21, Method: Composition-based stats. Identities = 33/160 (20%), Positives = 65/160 (40%), Gaps = 23/160 (14%) Query: 53 DEKIKALEVII----EKANAAPIIVAYHFNSDLARLQK----------AFPQGRTLDKDP 98 K+ L+ I+ + N ++V ++ L +K ++ K Sbjct: 495 SGKMLVLDYILAVTRSRGNDKVVLV-SNYTQTLDLFEKLCRARRYLYVRLDGTMSIKKRA 553 Query: 99 CTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 ++ +N P + + G GLNL G N LV F W+ +Q + R+ Sbjct: 554 KVVERFNNPLSPDFVFMLSSKAGGCGLNL-IGANRLVMFDPDWNPANDEQAMARVW---- 608 Query: 157 RQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + G K+ ++Y L++ TI+E + QR K + +++ Sbjct: 609 -RDGQKKTCYIYRLLSAGTIEEKIFQRQSHKKALSSCVVD 647 >gi|67969780|dbj|BAE01238.1| unnamed protein product [Macaca fascicularis] Length = 489 Score = 104 bits (260), Expect = 7e-21, Method: Composition-based stats. Identities = 28/139 (20%), Positives = 57/139 (41%), Gaps = 18/139 (12%) Query: 70 PIIVAYHFNSDLARLQK----------AFPQGRTLDKDPCTIQEWNEGKIP--LLFAHPA 117 +++ ++ L +K ++ K ++ +N P + Sbjct: 257 KVVLVSNYTRTLDLFEKLCRARRYLYVRLDGTMSIKKRAKVVERFNSPSSPDFVFMLSSK 316 Query: 118 SCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 + G GLNL G N LV F W+ +Q + R+ + G K+ ++Y L++ TI+ Sbjct: 317 AGGCGLNL-IGANRLVMFDPDWNPANDEQAMARVW-----RDGQKKTCYIYRLLSAGTIE 370 Query: 178 ELVLQRLRTKSTIQDLLLN 196 E + QR K + +++ Sbjct: 371 EKIFQRQSHKKALSSCVVD 389 >gi|260577578|ref|ZP_05845517.1| DNA/RNA helicase [Corynebacterium jeikeium ATCC 43734] gi|258604302|gb|EEW17540.1| DNA/RNA helicase [Corynebacterium jeikeium ATCC 43734] Length = 1029 Score = 104 bits (260), Expect = 7e-21, Method: Composition-based stats. Identities = 40/216 (18%), Positives = 79/216 (36%), Gaps = 27/216 (12%) Query: 2 KQYHKFQRELY--CDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVH----DEK 55 Y F +++ L G A N VK Q+ N ++ + K Sbjct: 791 ALYETFIKDMEMRLQLPGGKRRA-NILGALVKIKQICNHPAHFAGDGSGILADGKHRSAK 849 Query: 56 IKALEVIIEKA--NAAPIIVAYHF----NSDLARLQKAFP-------QGRTLDKDPCTIQ 102 I+ + I ++A +++ F LQ F G + K ++ Sbjct: 850 IERIFEITDQALEQGKKVLMFTQFPTFGKMLAPELQSTFGVEVPVLHGGLSRAKRTQMVR 909 Query: 103 EWNEGK-IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGF 161 ++ P++ + G G+ L ++++ WW+ Q +R + G Sbjct: 910 DFQSVDGPPIMILSVRAGGTGITLTE-ASVVIHIDRWWNPAVEDQATDR-----AYRIGQ 963 Query: 162 KRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 ++V VY L+ Q TIDE + + +K + ++ A Sbjct: 964 NKSVEVYKLVVQGTIDERIHDIIMSKRELAGDIVGA 999 >gi|303390601|ref|XP_003073531.1| DNA repair and recombination protein [Encephalitozoon intestinalis ATCC 50506] gi|303302678|gb|ADM12171.1| DNA repair and recombination protein [Encephalitozoon intestinalis ATCC 50506] Length = 688 Score = 104 bits (260), Expect = 7e-21, Method: Composition-based stats. Identities = 40/197 (20%), Positives = 78/197 (39%), Gaps = 17/197 (8%) Query: 11 LYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEK--ANA 68 L+ + + E + + K + G + +E ++ KIK L +++K + Sbjct: 417 LFIPRKEDGSEDLSEEASGEKNNEETLGLLKKEESQYGLVSSSCKIKILMDLLKKWKSEG 476 Query: 69 APIIVAYHFNSDLARLQKAFPQGRTLDKDPCT--------IQEWNEGK-IPLLFAHPASC 119 ++V L ++K + L D T + +N+ I + Sbjct: 477 NKVLVFSQTIRMLDIIEKCVEKYAYLRMDGRTSTSSRSSLVDRFNKDDSIFMFLLTTKVG 536 Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 G GLNL G + +V + W+ Q ER + G ++ V +Y I ++TI+E Sbjct: 537 GLGLNLT-GASRIVIYDPDWNPSTDTQAKERAW-----RYGQRKGVEIYRFICKDTIEEK 590 Query: 180 VLQRLRTKSTIQDLLLN 196 V Q+ K + +L+ Sbjct: 591 VYQKQIFKDLLGKKVLS 607 >gi|258576789|ref|XP_002542576.1| helicase SWR1 [Uncinocarpus reesii 1704] gi|237902842|gb|EEP77243.1| helicase SWR1 [Uncinocarpus reesii 1704] Length = 1614 Score = 104 bits (260), Expect = 7e-21, Method: Composition-based stats. Identities = 31/166 (18%), Positives = 70/166 (42%), Gaps = 19/166 (11%) Query: 44 EEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAF---------PQGR 92 +K + K++ L+ ++ + A ++ L L++ G Sbjct: 1270 PDKRLLQYDCGKLQQLDKLLRQLQAGGHRALIFTQMTKMLDILEQFLNVHGHRYLRLDGS 1329 Query: 93 TLDKDPCTI--QEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 T + + + N+ +I + S G G+NL G + ++F+ L W+ +Q +R Sbjct: 1330 TKIEQRQMLTERFNNDPRILVFILSSRSGGLGINLT-GADTVIFYDLDWNPAMDKQCQDR 1388 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + G R V +Y L+++ TI+ +L++ K + D+++ Sbjct: 1389 C-----HRIGQTRDVHIYRLVSEYTIESNILRKANQKRMLDDVVIQ 1429 >gi|41055574|ref|NP_957438.1| DNA repair and recombination protein RAD54-like [Danio rerio] gi|28277973|gb|AAH46050.1| RAD54-like (S. cerevisiae) [Danio rerio] Length = 738 Score = 104 bits (260), Expect = 7e-21, Method: Composition-based stats. Identities = 29/139 (20%), Positives = 58/139 (41%), Gaps = 18/139 (12%) Query: 70 PIIVAYHFNSDLARLQK----------AFPQGRTLDKDPCTIQEWNEGKIP--LLFAHPA 117 +++ ++ L +K ++ K ++ +N P + Sbjct: 509 KVVLVSNYTQTLDLFEKLCRNRRYLYVRLDGTMSIKKRAKIVERFNNPSSPEFIFMLSSK 568 Query: 118 SCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 + G GLNL G N LV F W+ +Q + R+ + G K+ ++Y L++ TI+ Sbjct: 569 AGGCGLNL-IGANRLVMFDPDWNPANDEQAMARVW-----RDGQKKTCYIYRLLSTGTIE 622 Query: 178 ELVLQRLRTKSTIQDLLLN 196 E +LQR K + +++ Sbjct: 623 EKILQRQAHKKALSSCVVD 641 >gi|33239499|ref|NP_874441.1| SNF2 family DNA/RNA helicase [Prochlorococcus marinus subsp. marinus str. CCMP1375] gi|33237024|gb|AAP99093.1| Superfamily II DNA/RNA helicases, SNF2 family [Prochlorococcus marinus subsp. marinus str. CCMP1375] Length = 1062 Score = 104 bits (260), Expect = 7e-21, Method: Composition-based stats. Identities = 34/190 (17%), Positives = 71/190 (37%), Gaps = 26/190 (13%) Query: 25 SASKTVKCLQLANGAVYYDEEKHWKEVH---DEKIKALEVIIEKANAA--PIIVAYHFNS 79 + + Q+ N +E ++ K++ LE I+++ + ++ F + Sbjct: 853 TLGLLTRLKQICNHPAIALKETQVEKNFLLRSSKLQRLEEILQEVKESHDRALLFTQF-A 911 Query: 80 DLARLQKAFPQ------------GRTLDKDPCTIQEWNEG--KIPLLFAHPASCGHGLNL 125 + L +A+ Q G K I + + + + G GLNL Sbjct: 912 EWGHLLQAYLQTKWESEVPFLHGGTPKGKRQEMIDRFQDDPRGPNIFLLSLKAGGVGLNL 971 Query: 126 QYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLR 185 N + WW+ Q +R + G K++V V+ I TI+E + Q + Sbjct: 972 TR-ANHVFHIDRWWNPAVENQATDR-----AYRIGQKKSVIVHKFITTGTIEEKINQMIL 1025 Query: 186 TKSTIQDLLL 195 K+ + + ++ Sbjct: 1026 EKTELAENIV 1035 >gi|195539537|ref|NP_001124238.1| DNA repair and recombination protein RAD54-like [Bos taurus] gi|119935983|gb|ABM06051.1| RAD54-like protein [Bos taurus] gi|296488837|gb|DAA30950.1| RAD54-like [Bos taurus] Length = 749 Score = 104 bits (260), Expect = 7e-21, Method: Composition-based stats. Identities = 28/139 (20%), Positives = 57/139 (41%), Gaps = 18/139 (12%) Query: 70 PIIVAYHFNSDLARLQK----------AFPQGRTLDKDPCTIQEWNEGKIP--LLFAHPA 117 +++ ++ L +K ++ K ++ +N P + Sbjct: 516 KVVLVSNYTQTLDLFEKLCRARRYLYVRLDGTMSIKKRAKVVERFNNPSSPDFVFMLSSK 575 Query: 118 SCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 + G GLNL G N LV F W+ +Q + R+ + G K+ ++Y L++ TI+ Sbjct: 576 AGGCGLNL-IGANRLVMFDPDWNPANDEQAMARVW-----RDGQKKTCYIYRLLSAGTIE 629 Query: 178 ELVLQRLRTKSTIQDLLLN 196 E + QR K + +++ Sbjct: 630 EKIFQRQSHKKALSSCVVD 648 >gi|194036393|ref|XP_001929392.1| PREDICTED: transcription termination factor 2-like [Sus scrofa] Length = 1166 Score = 104 bits (260), Expect = 7e-21, Method: Composition-based stats. Identities = 32/156 (20%), Positives = 61/156 (39%), Gaps = 17/156 (10%) Query: 53 DEKIKALEVIIEKANAAPIIVAYHFNSDLA---------RLQKAFPQGRTLDKDPCT-IQ 102 + LE I + + ++ + S L R+ A G K ++ Sbjct: 998 SSLLAELEAIRRNSGSQKSVIVSQWTSMLEVVALHLKRHRVTYATIDGSVNPKQRMDLVE 1057 Query: 103 EWNE-GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGF 161 +N G ++ + G GLNL GGN L + W+ Q +RI + G Sbjct: 1058 AFNSSGGPQVMLISLLAGGVGLNLT-GGNHLFLLDMHWNPSLEDQASDRI-----YRVGQ 1111 Query: 162 KRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 ++ V ++ + + T++E +LQ K + +L+ Sbjct: 1112 QKDVVIHRFVCEGTVEEKILQLQEKKKDLAKQILSG 1147 >gi|238060401|ref|ZP_04605110.1| non-specific serine/threonine protein kinase [Micromonospora sp. ATCC 39149] gi|237882212|gb|EEP71040.1| non-specific serine/threonine protein kinase [Micromonospora sp. ATCC 39149] Length = 795 Score = 104 bits (260), Expect = 7e-21, Method: Composition-based stats. Identities = 35/209 (16%), Positives = 71/209 (33%), Gaps = 22/209 (10%) Query: 3 QYHKFQRELYCDLQGEN-IEAFN-SASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 Y ++ ++ + IE + + Q+ N + K+ LE Sbjct: 565 LYQAVVDDMLARIESSDGIERRGLVLAAMTRLKQVCNHPAQLLRDGSALTGRSGKLARLE 624 Query: 61 VIIEK--ANAAPIIVAYHFNSDLARLQKAFPQ--GRTL----------DKDPCTIQEWNE 106 I+++ A ++ + L+ GR + D+D + ++ Sbjct: 625 EILDEVLAAGEKALLFTQYAEFGGMLRGHLSARFGREVLFLHGGVGKADRDAMVTRFQSD 684 Query: 107 GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVF 166 PL + G GL L N +V WW+ Q +R + G +R V Sbjct: 685 AGPPLFVLSLKAGGTGLTLT-AANHVVHVDRWWNPAVEDQATDR-----AFRIGQRRRVQ 738 Query: 167 VYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 V + T++E V + K ++ ++ Sbjct: 739 VRKFVCAGTLEEKVAAMIAEKRSLAASVV 767 >gi|46111317|ref|XP_382716.1| hypothetical protein FG02540.1 [Gibberella zeae PH-1] Length = 1163 Score = 104 bits (260), Expect = 7e-21, Method: Composition-based stats. Identities = 32/163 (19%), Positives = 63/163 (38%), Gaps = 20/163 (12%) Query: 53 DEKIKALEVIIEKA---NAAPIIVAYHFNSDLARLQK----------AFPQGRTLDKDPC 99 K++ + +++K N ++ L ++K +D+ Sbjct: 731 SAKLQLTKDLLQKVMIPNGHKTLLFSQGKQMLDIIEKCIGECGISYVRMDGETPVDRRQT 790 Query: 100 TIQEWNE-GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQ 158 I ++NE I + + G G NL G + ++ F W+ Q ER + Sbjct: 791 MIDKFNESPDIHVFLMTTRTGGLGTNLT-GADRIIIFDPDWNPSTDLQARERAW-----R 844 Query: 159 AGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 G K+ V +Y L+ + TI+E + R K + + +L K+ Sbjct: 845 LGQKKPVKIYRLMTEGTIEEKIYHRQIFKQFMTNKVLKDPKQR 887 >gi|296207850|ref|XP_002750833.1| PREDICTED: DNA repair and recombination protein RAD54-like [Callithrix jacchus] Length = 746 Score = 104 bits (260), Expect = 8e-21, Method: Composition-based stats. Identities = 28/139 (20%), Positives = 57/139 (41%), Gaps = 18/139 (12%) Query: 70 PIIVAYHFNSDLARLQK----------AFPQGRTLDKDPCTIQEWNEGKIP--LLFAHPA 117 +++ ++ L +K ++ K ++ +N P + Sbjct: 514 KVVLVSNYTQTLDLFEKLCRARRYLYVRLDGTMSIKKRAKVVERFNSPSSPDFVFMLSSK 573 Query: 118 SCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 + G GLNL G N LV F W+ +Q + R+ + G K+ ++Y L++ TI+ Sbjct: 574 AGGCGLNL-IGANRLVMFDPDWNPANDEQAMARVW-----RDGQKKTCYIYRLLSAGTIE 627 Query: 178 ELVLQRLRTKSTIQDLLLN 196 E + QR K + +++ Sbjct: 628 EKIFQRQSHKKALSSCVVD 646 >gi|237785888|ref|YP_002906593.1| putative DNA/RNA helicase [Corynebacterium kroppenstedtii DSM 44385] gi|237758800|gb|ACR18050.1| putative DNA/RNA helicase [Corynebacterium kroppenstedtii DSM 44385] Length = 1065 Score = 104 bits (260), Expect = 8e-21, Method: Composition-based stats. Identities = 32/187 (17%), Positives = 68/187 (36%), Gaps = 24/187 (12%) Query: 27 SKTVKCLQLANG-AVYYDEEKHWKEVH---DEKIKALEVIIEKA--NAAPIIVAYHFNSD 80 Q+ N A Y ++ + + K+ E ++++A +++ F Sbjct: 833 KLLTGLKQICNHPAQYLGDDSPFLDGTHHRSGKVATAEPLVDEALQQGRKVLIFTQFVVF 892 Query: 81 LARLQKAFP-----------QGRTLDKDPCTIQEWNEGK-IPLLFAHPASCGHGLNLQYG 128 L+ F + + +N P++ + G GLNL G Sbjct: 893 GNMLKTYFNNRYGIDVPFLNGSVERKERDRMVNTFNSPAGPPIMILSLRAGGTGLNLT-G 951 Query: 129 GNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKS 188 ++++ WW+ Q +R + G + V VY LI++ TI+E + + K Sbjct: 952 ASVVIHMDRWWNPAVENQATDR-----AYRIGQEHDVSVYKLISKGTIEEKINDIIEGKL 1006 Query: 189 TIQDLLL 195 + ++ Sbjct: 1007 QLASAVV 1013 >gi|194386250|dbj|BAG59689.1| unnamed protein product [Homo sapiens] Length = 567 Score = 104 bits (260), Expect = 8e-21, Method: Composition-based stats. Identities = 28/139 (20%), Positives = 57/139 (41%), Gaps = 18/139 (12%) Query: 70 PIIVAYHFNSDLARLQK----------AFPQGRTLDKDPCTIQEWNEGKIP--LLFAHPA 117 +++ ++ L +K ++ K ++ +N P + Sbjct: 335 KVVLVSNYTQTLDLFEKLCRARRYLYVRLDGTMSIKKRAKVVERFNSPSSPDFVFMLSSK 394 Query: 118 SCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 + G GLNL G N LV F W+ +Q + R+ + G K+ ++Y L++ TI+ Sbjct: 395 AGGCGLNL-IGANRLVMFDPDWNPANDEQAMARVW-----RDGQKKTCYIYRLLSAGTIE 448 Query: 178 ELVLQRLRTKSTIQDLLLN 196 E + QR K + +++ Sbjct: 449 EKIFQRQSHKKALSSCVVD 467 >gi|178056748|ref|NP_001116655.1| DNA repair and recombination protein RAD54-like [Sus scrofa] gi|168084900|dbj|BAG09488.1| DNA repair protein RAD54 [Sus scrofa] Length = 747 Score = 104 bits (260), Expect = 8e-21, Method: Composition-based stats. Identities = 28/139 (20%), Positives = 57/139 (41%), Gaps = 18/139 (12%) Query: 70 PIIVAYHFNSDLARLQK----------AFPQGRTLDKDPCTIQEWNEGKIP--LLFAHPA 117 +++ ++ L +K ++ K ++ +N P + Sbjct: 515 KVVLVSNYTQTLDLFEKLCRARRYLYVRLDGTMSIKKRAKVVERFNSPSSPDFVFMLSSK 574 Query: 118 SCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 + G GLNL G N LV F W+ +Q + R+ + G K+ ++Y L++ TI+ Sbjct: 575 AGGCGLNL-IGANRLVMFDPDWNPANDEQAMARVW-----RDGQKKTCYIYRLLSAGTIE 628 Query: 178 ELVLQRLRTKSTIQDLLLN 196 E + QR K + +++ Sbjct: 629 EKIFQRQSHKKALSSCVVD 647 >gi|158258659|dbj|BAF85300.1| unnamed protein product [Homo sapiens] Length = 747 Score = 104 bits (260), Expect = 8e-21, Method: Composition-based stats. Identities = 28/139 (20%), Positives = 57/139 (41%), Gaps = 18/139 (12%) Query: 70 PIIVAYHFNSDLARLQK----------AFPQGRTLDKDPCTIQEWNEGKIP--LLFAHPA 117 +++ ++ L +K ++ K ++ +N P + Sbjct: 515 KVVLVSNYTQTLDLFEKLCRARRYLYVRLDGTMSIKKRAKVVERFNSPSSPDFVFMLSSK 574 Query: 118 SCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 + G GLNL G N LV F W+ +Q + R+ + G K+ ++Y L++ TI+ Sbjct: 575 AGGCGLNL-IGANRLVMFDPDWNPANDEQAMARVW-----RDGQKKTCYIYRLLSAGTIE 628 Query: 178 ELVLQRLRTKSTIQDLLLN 196 E + QR K + +++ Sbjct: 629 EKIFQRQSHKKALSSCVVD 647 >gi|114556131|ref|XP_513146.2| PREDICTED: RAD54-like protein [Pan troglodytes] Length = 901 Score = 104 bits (260), Expect = 8e-21, Method: Composition-based stats. Identities = 28/139 (20%), Positives = 57/139 (41%), Gaps = 18/139 (12%) Query: 70 PIIVAYHFNSDLARLQK----------AFPQGRTLDKDPCTIQEWNEGKIP--LLFAHPA 117 +++ ++ L +K ++ K ++ +N P + Sbjct: 669 KVVLVSNYTQTLDLFEKLCRARRYLYVRLDGTMSIKKRAKVVERFNSPSSPDFVFMLSSK 728 Query: 118 SCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 + G GLNL G N LV F W+ +Q + R+ + G K+ ++Y L++ TI+ Sbjct: 729 AGGCGLNL-IGANRLVMFDPDWNPANDEQAMARVW-----RDGQKKTCYIYRLLSAGTIE 782 Query: 178 ELVLQRLRTKSTIQDLLLN 196 E + QR K + +++ Sbjct: 783 EKIFQRQSHKKALSSCVVD 801 >gi|216548186|ref|NP_003570.2| DNA repair and recombination protein RAD54-like [Homo sapiens] gi|216548193|ref|NP_001136020.1| DNA repair and recombination protein RAD54-like [Homo sapiens] gi|51316508|sp|Q92698|RAD54_HUMAN RecName: Full=DNA repair and recombination protein RAD54-like; AltName: Full=RAD54 homolog; Short=hHR54; Short=hRAD54 gi|47777671|gb|AAT38113.1| RAD54-like (S. cerevisiae) [Homo sapiens] gi|56204069|emb|CAI22117.1| RAD54-like (S. cerevisiae) [Homo sapiens] gi|111307699|gb|AAI21061.1| RAD54-like (S. cerevisiae) [Homo sapiens] gi|111309424|gb|AAI21060.1| RAD54-like (S. cerevisiae) [Homo sapiens] gi|119627335|gb|EAX06930.1| RAD54-like (S. cerevisiae), isoform CRA_b [Homo sapiens] Length = 747 Score = 104 bits (260), Expect = 8e-21, Method: Composition-based stats. Identities = 28/139 (20%), Positives = 57/139 (41%), Gaps = 18/139 (12%) Query: 70 PIIVAYHFNSDLARLQK----------AFPQGRTLDKDPCTIQEWNEGKIP--LLFAHPA 117 +++ ++ L +K ++ K ++ +N P + Sbjct: 515 KVVLVSNYTQTLDLFEKLCRARRYLYVRLDGTMSIKKRAKVVERFNSPSSPDFVFMLSSK 574 Query: 118 SCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 + G GLNL G N LV F W+ +Q + R+ + G K+ ++Y L++ TI+ Sbjct: 575 AGGCGLNL-IGANRLVMFDPDWNPANDEQAMARVW-----RDGQKKTCYIYRLLSAGTIE 628 Query: 178 ELVLQRLRTKSTIQDLLLN 196 E + QR K + +++ Sbjct: 629 EKIFQRQSHKKALSSCVVD 647 >gi|1495483|emb|CAA66379.1| RAD54 [Homo sapiens] Length = 747 Score = 104 bits (260), Expect = 8e-21, Method: Composition-based stats. Identities = 28/139 (20%), Positives = 57/139 (41%), Gaps = 18/139 (12%) Query: 70 PIIVAYHFNSDLARLQK----------AFPQGRTLDKDPCTIQEWNEGKIP--LLFAHPA 117 +++ ++ L +K ++ K ++ +N P + Sbjct: 515 KVVLVSNYTQTLDLFEKLCRARRYLYVRLDGTMSIKKRAKVVERFNSPSSPDFVFMLSSK 574 Query: 118 SCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 + G GLNL G N LV F W+ +Q + R+ + G K+ ++Y L++ TI+ Sbjct: 575 AGGCGLNL-IGANRLVMFDPDWNPANDEQAMARVW-----RDGQKKTCYIYRLLSAGTIE 628 Query: 178 ELVLQRLRTKSTIQDLLLN 196 E + QR K + +++ Sbjct: 629 EKIFQRQSHKKALSSCVVD 647 >gi|332019436|gb|EGI59920.1| Lymphoid-specific helicase [Acromyrmex echinatior] Length = 690 Score = 104 bits (260), Expect = 8e-21, Method: Composition-based stats. Identities = 27/158 (17%), Positives = 60/158 (37%), Gaps = 19/158 (12%) Query: 52 HDEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQK----------AFPQGRTLDKDPC 99 K+ L+ ++ K +++ L ++ ++ Sbjct: 485 SSGKLLVLDAMLAKLKMRGHKVLLFSTMTMILDMIEDYLTLRDYNYVRLDGATKIEARKQ 544 Query: 100 TIQEWNE-GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQ 158 I +N + L + G GLNL G + ++ + W+ + Q + R + Sbjct: 545 NIAAFNNDPDLFLFLISIRAGGVGLNL-MGADTVIIYDSDWNPQVDIQAMARC-----HR 598 Query: 159 AGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 G + V VY L + TIDE +++R K ++ ++++ Sbjct: 599 IGQTKPVVVYKLCTKGTIDEAIMKRADAKRILEKIVIS 636 >gi|212532137|ref|XP_002146225.1| SNF2 family helicase/ATPase PasG, putative [Penicillium marneffei ATCC 18224] gi|210071589|gb|EEA25678.1| SNF2 family helicase/ATPase PasG, putative [Penicillium marneffei ATCC 18224] Length = 916 Score = 104 bits (260), Expect = 8e-21, Method: Composition-based stats. Identities = 38/220 (17%), Positives = 78/220 (35%), Gaps = 34/220 (15%) Query: 5 HKFQRELYCDLQGENIEAFNSASKTVKCLQ--LANGAV------YYDEEKHWKEV---HD 53 + +R L + I S +Q LA + + D+ E Sbjct: 617 EEIERAKTIKLAKKEI---GSKKLQNPIMQARLACNSPHNFYWPWGDDSSTVDETLITAS 673 Query: 54 EKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQK-----------AFPQGRTLDKDPCT 100 K+ L+ ++ I++ F + L +Q G + Sbjct: 674 GKMLLLDRLVPCLMKKGHKILIFSQFKTQLDLIQDWATQLRGWNCCRIDGGVSQVDRRAQ 733 Query: 101 IQEWNEGKI-PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQA 159 I+ +N K + + G G+NL + ++ F W+ ++ Q R + Sbjct: 734 IKAFNSNKNFKIFLLSTRAGGQGINLT-AADTVILFDSDWNPQQDLQA-----QDRAHRI 787 Query: 160 GFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 G R V VY L + T+++ +L++ +K ++ L++ K Sbjct: 788 GQTRPVIVYRLATKGTVEQTLLEKADSKRRLERLVIQKGK 827 >gi|327286054|ref|XP_003227746.1| PREDICTED: hypothetical protein LOC100558176 [Anolis carolinensis] Length = 4477 Score = 104 bits (259), Expect = 8e-21, Method: Composition-based stats. Identities = 33/156 (21%), Positives = 67/156 (42%), Gaps = 19/156 (12%) Query: 55 KIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAF---------PQGRTLDKDPCTI-Q 102 K++ L++++ + A A +++ L L++ G T + + + Sbjct: 2877 KLQTLDILLRQLKAGAHRVLIFTQMTRMLDVLEQFLNYHGHIYLRLDGSTRVEQRQALME 2936 Query: 103 EWNEGK-IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGF 161 +N K I S G G+NL G + +VF+ W+ Q +R + G Sbjct: 2937 RFNADKRIFCFILSTRSGGVGVNLT-GADTVVFYDSDWNPTMDAQAQDRC-----HRIGQ 2990 Query: 162 KRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 R V +Y LI++ T++E +L++ K + D+ + Sbjct: 2991 TRDVHIYRLISERTVEENILKKANQKRMLGDMAIEG 3026 >gi|302823829|ref|XP_002993563.1| hypothetical protein SELMODRAFT_137237 [Selaginella moellendorffii] gi|300138630|gb|EFJ05392.1| hypothetical protein SELMODRAFT_137237 [Selaginella moellendorffii] Length = 852 Score = 104 bits (259), Expect = 8e-21, Method: Composition-based stats. Identities = 40/159 (25%), Positives = 69/159 (43%), Gaps = 19/159 (11%) Query: 59 LEVIIEKANAAPIIVAYHFNSDLARL-----QKAFPQGRT-----LDKDPCTIQEWNEGK 108 LE + +K N ++V ++ L ++ +P R + K +Q++N+ Sbjct: 516 LENLRKKTNDRIVLV-SNYTQTLDLFAQLCRERNYPYVRLDGSTSIGKRQKLVQKFNDPS 574 Query: 109 IP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVF 166 + G GLNL GGN LV F W+ +Q R+ + G K+ V+ Sbjct: 575 QNEFAFLLSSKAGGCGLNL-IGGNRLVLFDPDWNPANDKQAAARVW-----RDGQKKRVY 628 Query: 167 VYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIHV 205 +Y +A TI+E V QR +K +Q ++ K E + Sbjct: 629 IYRFLATGTIEEKVYQRQISKEGLQKVISGDSKAEVRKL 667 >gi|194335233|ref|YP_002017027.1| Non-specific serine/threonine protein kinase [Pelodictyon phaeoclathratiforme BU-1] gi|194307710|gb|ACF42410.1| Non-specific serine/threonine protein kinase [Pelodictyon phaeoclathratiforme BU-1] Length = 1007 Score = 104 bits (259), Expect = 8e-21, Method: Composition-based stats. Identities = 44/224 (19%), Positives = 76/224 (33%), Gaps = 35/224 (15%) Query: 1 MKQYHKFQRE------LYCDLQGENIEAFNSASKTVKCL-------QLANGAVYYDEEKH 47 MK+Y +E D E IE+ + L Q+ N + + Sbjct: 762 MKEYCSLTKEQASLYKAVVDELQEKIESAEGIDRRGLVLALLVKLKQVCNHPAHLLGDNS 821 Query: 48 WKEVHDEKIKALEVIIE--KANAAPIIVAYHFN-------SDLARLQKA----FPQGRTL 94 KIK L ++ + ++ F L L G T Sbjct: 822 AIAHRSGKIKRLTELLGDIREAGEKTLLFTQFTMMGTMLQHYLQELYGEEVLFLHGGVTK 881 Query: 95 DKDPCTIQEWN--EGKIP-LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERI 151 + ++ + EG P + + G GLNL N +V F WW+ Q +R Sbjct: 882 KRRDEMVESFQKEEGSSPSIFILSLKAGGTGLNLTT-ANHVVHFDRWWNPAVENQATDR- 939 Query: 152 GVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 + G + V V+ I T++E + + + K+T+ +L Sbjct: 940 ----AFRIGQHKNVEVHKFITTGTLEERIDEMIEKKTTVAGQVL 979 >gi|62738897|pdb|1Z3I|X Chain X, Structure Of The Swi2SNF2 CHROMATIN REMODELING DOMAIN OF Eukaryotic Rad54 Length = 644 Score = 104 bits (259), Expect = 8e-21, Method: Composition-based stats. Identities = 29/139 (20%), Positives = 58/139 (41%), Gaps = 18/139 (12%) Query: 70 PIIVAYHFNSDLARLQK----------AFPQGRTLDKDPCTIQEWNEGKIP--LLFAHPA 117 +++ ++ L +K ++ K ++ +N P + Sbjct: 418 KVVLVSNYTQTLDLFEKLCRNRRYLYVRLDGTMSIKKRAKIVERFNNPSSPEFIFMLSSK 477 Query: 118 SCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 + G GLNL G N LV F W+ +Q + R+ + G K+ ++Y L++ TI+ Sbjct: 478 AGGCGLNL-IGANRLVMFDPDWNPANDEQAMARVW-----RDGQKKTCYIYRLLSTGTIE 531 Query: 178 ELVLQRLRTKSTIQDLLLN 196 E +LQR K + +++ Sbjct: 532 EKILQRQAHKKALSSCVVD 550 >gi|87123478|ref|ZP_01079329.1| SNF2 related domain:DEAD/DEAH box helicase [Synechococcus sp. RS9917] gi|86169198|gb|EAQ70454.1| SNF2 related domain:DEAD/DEAH box helicase [Synechococcus sp. RS9917] Length = 1065 Score = 104 bits (259), Expect = 8e-21, Method: Composition-based stats. Identities = 37/217 (17%), Positives = 75/217 (34%), Gaps = 36/217 (16%) Query: 8 QRELYCDLQGENIEAFNSA----------SKTVKCLQLANG---AVYYDEEKHWKEVHDE 54 Q+ LY + ++A A K Q+ N A+ + Sbjct: 827 QKALYAKTVEDTLDAIARAPRGQRHGQVLGLLTKLKQICNHPALALKEEAAGDEFLQRSM 886 Query: 55 KIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGR------------TLDKDPCT 100 K++ LE I+E+ ++ F ++ L + + Q R + + Sbjct: 887 KLQRLEEILEEVIDAGDRALLFTQF-AEWGHLLQGYLQRRWRSEVPFLNGSTSKSERQAM 945 Query: 101 IQEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQ 158 + + E L + G GLNL + + WW+ Q +R + Sbjct: 946 VDRFQEDPRGPQLFLLSLKAGGVGLNLTRASH-VFHIDRWWNPAVENQATDR-----AYR 999 Query: 159 AGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 G V V+ I +++E + + +R KS + + ++ Sbjct: 1000 IGQTNRVMVHKFITSGSVEEKIDRMIREKSRLAEDII 1036 >gi|300858235|ref|YP_003783218.1| ATP-dependent helicase [Corynebacterium pseudotuberculosis FRC41] gi|300685689|gb|ADK28611.1| ATP-dependent helicase [Corynebacterium pseudotuberculosis FRC41] gi|302205957|gb|ADL10299.1| ATP dependent helicase [Corynebacterium pseudotuberculosis C231] gi|302330510|gb|ADL20704.1| ATP-dependent helicase [Corynebacterium pseudotuberculosis 1002] gi|308276192|gb|ADO26091.1| ATP-dependent helicase [Corynebacterium pseudotuberculosis I19] Length = 1031 Score = 104 bits (259), Expect = 8e-21, Method: Composition-based stats. Identities = 33/214 (15%), Positives = 74/214 (34%), Gaps = 26/214 (12%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKT--VKCLQLANG---AVYYDEEKHWKEVH-DEK 55 Y + ++ + + + K Q+ N + D + K H K Sbjct: 798 ALYRAYVEDIQKQIDQAEGISKRGLVLSALTKIKQICNHPAHFLSDDSDVTVKGKHRSGK 857 Query: 56 IKALEVIIEKA--NAAPIIVAYHFNSDLARLQKAFPQ-----------GRTLDKDPCTIQ 102 ++ L ++ A + +++ + + L G + ++ Sbjct: 858 VEELMRLVSDAVESEQRLLIFTQYRAFGEILAPYLSDYFGAQIPFLHGGVSKVGRDRMVE 917 Query: 103 EWNEGK-IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGF 161 + + P + + G GLNL +I+V WW+ Q +R + G Sbjct: 918 NFQSPQGPPAMILSLKAGGTGLNLT-AASIVVHMDRWWNPAVENQATDR-----AFRIGQ 971 Query: 162 KRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 ++ V VY +I T++E + L K+ + ++ Sbjct: 972 RKDVTVYKMITAGTLEESIQDILDGKTQLASAVV 1005 >gi|255728815|ref|XP_002549333.1| DNA repair and recombination protein RAD54 [Candida tropicalis MYA-3404] gi|240133649|gb|EER33205.1| DNA repair and recombination protein RAD54 [Candida tropicalis MYA-3404] Length = 847 Score = 104 bits (259), Expect = 8e-21, Method: Composition-based stats. Identities = 31/150 (20%), Positives = 62/150 (41%), Gaps = 19/150 (12%) Query: 59 LEVIIEKANAAPIIVAYHFNSDLARLQK----------AFPQGRTLDKDPCTIQEWNE-- 106 L I ++ N +++ ++ L ++K +++K + ++N Sbjct: 613 LHKIKKETNDKIVLI-SNYTQTLDLIEKMCRNKKYGVLRLDGTLSINKRQKLVDKFNNPD 671 Query: 107 GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVF 166 G + + G G+NL G N LV W+ QQ + R+ + G K+ F Sbjct: 672 GSEFIFLLSSKAGGCGINL-IGANRLVLIDPDWNPASDQQALARVW-----RDGQKKDCF 725 Query: 167 VYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 +Y I+ TI+E + QR K + +++ Sbjct: 726 IYRFISTGTIEEKIFQRQSMKLQLSSCVVD 755 >gi|170043847|ref|XP_001849581.1| domino [Culex quinquefasciatus] gi|167867144|gb|EDS30527.1| domino [Culex quinquefasciatus] Length = 1027 Score = 104 bits (259), Expect = 8e-21, Method: Composition-based stats. Identities = 30/156 (19%), Positives = 66/156 (42%), Gaps = 19/156 (12%) Query: 55 KIKALEVIIEK--ANAAPIIVAYHFNSDLARLQ---------KAFPQGRTLDKDPCTI-Q 102 K++ L+ ++++ + +++ L L+ G T + + + Sbjct: 633 KLQTLDRLLKELKSGGHRVLIFTQMTRMLDVLEAFLNYHGHIYLRLDGTTKVEQRQLLME 692 Query: 103 EWNEGK-IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGF 161 +N K + + S G G+NL G + ++F+ W+ Q +R + G Sbjct: 693 RFNGDKRMFVFILSTRSGGVGINLT-GADTVIFYDSDWNPTMDAQAQDRC-----HRIGQ 746 Query: 162 KRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 R V +Y L+++ TI+E +L++ K + DL + Sbjct: 747 TRDVHIYRLVSEKTIEENILKKANQKRMLGDLAIEG 782 >gi|328699200|ref|XP_001946170.2| PREDICTED: chromatin-remodeling complex ATPase chain Iswi-like [Acyrthosiphon pisum] Length = 1051 Score = 104 bits (259), Expect = 8e-21, Method: Composition-based stats. Identities = 52/235 (22%), Positives = 93/235 (39%), Gaps = 50/235 (21%) Query: 1 MKQY---HKFQRELYCDLQGENIEAFNSASKTVK------CLQLAN-------------G 38 +K Y K QRE Y + ++I+ N A K K +QL G Sbjct: 390 VKVYVGLSKLQREWYTKVLMKDIDVVNGAGKVEKMRLQNILMQLRKCSNHPYLFDGVEPG 449 Query: 39 AVYYDEEKHW-----KEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAF----- 88 Y +E V D+ +KAL+ + ++V + L+ Sbjct: 450 PPYTTDEHIVFNCGKMVVFDKLLKALKE-----QDSRVLVFSQMTRMMDILEDYMHWKGY 504 Query: 89 ----PQGRTLDKDPC-TIQEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDL 141 G+T +D I E+NE K + S G G+NL ++++ + W+ Sbjct: 505 NYCRLDGQTPHEDRQRQINEYNEPNSKKFVFILSTRSGGLGINL-ATADVVIIYDSDWNP 563 Query: 142 EEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + Q ++R + G K+ V V+ LI +NT++E +++R K + L++ Sbjct: 564 QMDLQAMDR-----AHRIGQKKQVRVFRLITENTVEEKIVERAEVKLRLDKLVIQ 613 >gi|320164602|gb|EFW41501.1| SNF2 family DNA-dependent ATPase [Capsaspora owczarzaki ATCC 30864] Length = 2139 Score = 104 bits (259), Expect = 9e-21, Method: Composition-based stats. Identities = 41/218 (18%), Positives = 81/218 (37%), Gaps = 32/218 (14%) Query: 8 QRELYCDLQGENIEAFNSASKTVKCL-----------QLAN-GAVYYDEEKHWKEVHDEK 55 + + Q + + N + KC + A A D + K Sbjct: 861 KSSMVVQPQQQRVTLMNILMELRKCTNHPYLFPGAEPEFAGDSAEVADMQAQSLVQASGK 920 Query: 56 IKALEVIIE--KANAAPIIVAYHFNSDLARLQKAF---------PQGRTLDKDPC-TIQE 103 + L+ ++ +A +++ L L+ G TL+ D I + Sbjct: 921 LVLLDKMLPGLRARGHRVLIFSQMTRVLDILEDYLSHLQMPFCRLDGSTLNTDRQHLIDK 980 Query: 104 WNEGKIPLL--FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGF 161 +N P+ + G G+NL + + ++ F ++ Q + R + G Sbjct: 981 FNAPNSPIFCFLLSTRAGGLGINL-HTADTIIMFDSDFNPHSDMQALSR-----AHRIGQ 1034 Query: 162 KRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 K+ V VY L+ +TI+E +LQR R K + +++ L+ Sbjct: 1035 KKPVTVYRLVTSDTIEEGILQRARKKLLLGHVVVEKLE 1072 >gi|312197752|ref|YP_004017813.1| SNF2-related protein [Frankia sp. EuI1c] gi|311229088|gb|ADP81943.1| SNF2-related protein [Frankia sp. EuI1c] Length = 1045 Score = 104 bits (259), Expect = 9e-21, Method: Composition-based stats. Identities = 34/213 (15%), Positives = 72/213 (33%), Gaps = 23/213 (10%) Query: 2 KQYHKFQRELYCDLQGENIEAFN---SASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKA 58 Y ++ L+ + + + Q+ N + + K+ Sbjct: 813 ALYRAVVDDMMERLRDASSPVRRNGVVLAAMTRLKQVCNHPAHLLGDGSALAGRSGKLAR 872 Query: 59 LEVIIEK--ANAAPIIVAYHFN----------SDLARLQKAFPQGRTLDKDPCT-IQEWN 105 LE ++ + A + F S ++ +F G + I+ + Sbjct: 873 LEELLTQVVAGGERALCFTQFARFGAMLAPYLSTRLGVEVSFLHGGLRAAERDALIERFQ 932 Query: 106 EGKIP-LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA 164 G P + + G G+NL N +V WW+ Q +R + G +R Sbjct: 933 TGTGPGVFLLSLKAGGTGVNLT-AANHVVHVDRWWNPAVEAQATDR-----AHRIGQRRD 986 Query: 165 VFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 V+V L+ T++E + + L K+ + ++ Sbjct: 987 VWVRTLLCMGTLEERIDRILVDKAALARTVVGG 1019 >gi|213964455|ref|ZP_03392655.1| SNF2/RAD54 family protein [Corynebacterium amycolatum SK46] gi|213952648|gb|EEB64030.1| SNF2/RAD54 family protein [Corynebacterium amycolatum SK46] Length = 1079 Score = 104 bits (259), Expect = 9e-21, Method: Composition-based stats. Identities = 36/187 (19%), Positives = 72/187 (38%), Gaps = 24/187 (12%) Query: 29 TVKCLQLANGAVYYDEEKHWKEVH----DEKIKALEVIIEK--ANAAPIIVAYHFN---- 78 +K Q+ N +Y + H K+ LE ++++ N +V F Sbjct: 822 IMKLKQICNHPAHYQHDGSGLLNHGQHRSGKVARLEELVDEIVQNGERALVFTQFVEFGK 881 Query: 79 ----SDLARLQKAFP---QGRTLDKDPCTIQEWNEGK-IPLLFAHPASCGHGLNLQYGGN 130 RL P T + + E+N P++ + G G+NL N Sbjct: 882 MLAPHFSKRLGVDIPFIQGAMTPAQREKVVAEFNAPDGPPIILLSTLAAGVGINL-VAAN 940 Query: 131 ILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 ++ WW+ Q +R + G ++ V V+ L++ T++E + + + K+ + Sbjct: 941 HVIHIDRWWNPAVENQATDR-----SYRIGQRKDVHVHKLVSVGTLEERIDELIFEKAEL 995 Query: 191 QDLLLNA 197 D ++ A Sbjct: 996 ADAVVRA 1002 >gi|159154987|gb|AAI54480.1| Hells protein [Danio rerio] Length = 290 Score = 104 bits (259), Expect = 9e-21, Method: Composition-based stats. Identities = 29/139 (20%), Positives = 57/139 (41%), Gaps = 17/139 (12%) Query: 68 AAPIIVAYHFNSDLARLQ-----KAFPQGRT------LDKDPCTIQEWNEGKIPLLFAHP 116 +++ S L L + + R D+D + ++ ++ L Sbjct: 68 GHKVLIFSQMTSILDILMDYCYLRGYEYSRLDGSMSYADRDENMKKFSSDPEVFLFLLST 127 Query: 117 ASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTI 176 + G G+NL + ++ F W+ + Q +R + G + V VY LI NTI Sbjct: 128 RAGGLGINLT-SADTVIIFDSDWNPQADLQAQDRC-----HRIGQTKPVVVYRLITANTI 181 Query: 177 DELVLQRLRTKSTIQDLLL 195 DE +L+R K ++ +++ Sbjct: 182 DEKILERASAKRKLEKMVI 200 >gi|242023203|ref|XP_002432025.1| DNA repair and recombination protein RAD54B, putative [Pediculus humanus corporis] gi|212517383|gb|EEB19287.1| DNA repair and recombination protein RAD54B, putative [Pediculus humanus corporis] Length = 840 Score = 104 bits (259), Expect = 9e-21, Method: Composition-based stats. Identities = 40/214 (18%), Positives = 81/214 (37%), Gaps = 26/214 (12%) Query: 3 QYHKFQRELYCDLQGEN-IEAFNSASKTVKCLQLANGAVYYDEEKHWKE----VHDEKIK 57 Y+ + E IE + ++ N +++ ++ E K+K Sbjct: 511 MYNSLVNSFLNAKESEEFIEGSSHLELITSLKKICNYPSLLNKDDNYLEKIDIDTSGKLK 570 Query: 58 A----LEVIIEKANAAPIIVAYHFNSDLARLQKAF---------PQGRTLD-KDPCTIQE 103 L+ + + +++ + L L+K F G T + +++ Sbjct: 571 VTVNFLKELQMTSVKEKVLIVSNATQTLNLLEKVFHVLNYSTCRLDGNTPSAQRNKIVED 630 Query: 104 WN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFK 162 +N + + + G GLN+ G + L+ F W+ Q I RI + G K Sbjct: 631 FNTSRDLFIFLLSSKAGGVGLNVT-GASRLILFDSDWNPATDLQAISRIW-----RDGQK 684 Query: 163 RAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 VF+Y L+ TI+E + QR +K + + ++ Sbjct: 685 FPVFIYRLLTTGTIEEKIYQRQISKQGLCEGTVD 718 >gi|115910490|ref|XP_783941.2| PREDICTED: similar to PASG [Strongylocentrotus purpuratus] gi|115960855|ref|XP_001194026.1| PREDICTED: similar to PASG [Strongylocentrotus purpuratus] Length = 734 Score = 104 bits (259), Expect = 9e-21, Method: Composition-based stats. Identities = 29/160 (18%), Positives = 66/160 (41%), Gaps = 22/160 (13%) Query: 51 VHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQK----------AFPQGRTLDKDPCT 100 V D+ + AL+ +++ F + L L+ +L+ Sbjct: 495 VVDKLLPALKE-----RGHKVLIFSQFTTMLDILEDFCHMRSHQYCRLDGTTSLEDRQER 549 Query: 101 IQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQA 159 ++E+N + L + G G+NL + ++ + W+ + Q +R + Sbjct: 550 MKEFNSNPDVFLFLLSTRAGGLGINLT-AADTVIIYDSDWNPQSDLQAQDRC-----HRI 603 Query: 160 GFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 G + V +Y L+ NTID+ +++R K ++ ++++ K Sbjct: 604 GQTKPVIIYRLVTANTIDQRIVERAAAKRKLEKMVIHQGK 643 >gi|146088639|ref|XP_001466107.1| DNA repair protein [Leishmania infantum JPCM5] gi|134070209|emb|CAM68545.1| putative DNA repair protein [Leishmania infantum JPCM5] Length = 1092 Score = 104 bits (259), Expect = 9e-21, Method: Composition-based stats. Identities = 34/162 (20%), Positives = 67/162 (41%), Gaps = 20/162 (12%) Query: 49 KEVHDEKIKALEVIIEKA-NAAPIIVAYHFNSDLARLQKAFPQGR-----------TLDK 96 K +H K+ A+ IEK ++V F S L L + + Q R TL + Sbjct: 919 KPLHGTKLDAIANYIEKVPKDEKVVVFSQFGSMLD-LTQYWLQRRSIRAVKLCGSLTLTQ 977 Query: 97 DPCTIQEW-NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTR 155 +Q + ++ + ++ + G GLNLQ N +V WW+ Q ++R Sbjct: 978 RQSVLQAFLHDQNVRVILISLKAGGEGLNLQV-ANHVVLTDPWWNPAVEMQAVQR----- 1031 Query: 156 QRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + G R V + +++++E ++ K + + ++ Sbjct: 1032 AHRIGQTRPVHAVRFVTEHSVEERMVDLQDKKMLVFEGTIDG 1073 >gi|297848774|ref|XP_002892268.1| SNF2 domain-containing protein [Arabidopsis lyrata subsp. lyrata] gi|297338110|gb|EFH68527.1| SNF2 domain-containing protein [Arabidopsis lyrata subsp. lyrata] Length = 843 Score = 104 bits (259), Expect = 9e-21, Method: Composition-based stats. Identities = 30/156 (19%), Positives = 59/156 (37%), Gaps = 21/156 (13%) Query: 52 HDEKIKALEV----IIEKANAAPIIVAYHFNSDLARLQKAFPQ----------GRTLDKD 97 KI+AL ++E+ +A IV F S L + + T+ Sbjct: 670 TSTKIEALREEIRFMVERDGSAKAIVFSQFTSFLDIINYTLGKCGVSCVQLVGSMTMAAR 729 Query: 98 PCTIQEW-NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 I ++ + + + G LNL ++ + WW+ +ER R Sbjct: 730 DTAINKFKEDPDCRVFLMSLKAGGVALNLTVASHVFMM-DPWWN-----PAVERQAQDRI 783 Query: 157 RQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQD 192 + G + + V I +NT++E +L+ + K + + Sbjct: 784 HRIGQYKPIRVVRFIIENTVEERILRLQKKKELVFE 819 >gi|133778670|gb|AAI33862.1| Hells protein [Danio rerio] Length = 270 Score = 104 bits (259), Expect = 9e-21, Method: Composition-based stats. Identities = 29/139 (20%), Positives = 57/139 (41%), Gaps = 17/139 (12%) Query: 68 AAPIIVAYHFNSDLARLQ-----KAFPQGRT------LDKDPCTIQEWNEGKIPLLFAHP 116 +++ S L L + + R D+D + ++ ++ L Sbjct: 48 GHKVLIFSQMTSILDILMDYCYLRGYEYSRLDGSMSYADRDENMKKFSSDPEVFLFLLST 107 Query: 117 ASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTI 176 + G G+NL + ++ F W+ + Q +R + G + V VY LI NTI Sbjct: 108 RAGGLGINLT-SADTVIIFDSDWNPQADLQAQDRC-----HRIGQTKPVVVYRLITANTI 161 Query: 177 DELVLQRLRTKSTIQDLLL 195 DE +L+R K ++ +++ Sbjct: 162 DEKILERASAKRKLEKMVI 180 >gi|71681342|gb|AAI00395.1| Helicase, lymphoid specific [Mus musculus] Length = 821 Score = 104 bits (259), Expect = 9e-21, Method: Composition-based stats. Identities = 28/159 (17%), Positives = 60/159 (37%), Gaps = 19/159 (11%) Query: 50 EVHDEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQK----------AFPQGRTLDKD 97 + K L+ ++ + ++V S L L + + Sbjct: 578 VTNSGKFLILDRMLPELKKRGHKVLVFSQMTSMLDILMDYCHPRNFIFSRLDGSMSYSER 637 Query: 98 PCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 I +N + + L + G G+NL + ++ + W+ + Q +R Sbjct: 638 EKNIYSFNTDPDVFLFLVSTRAGGLGINLT-AADTVIIYDSDWNPQSDLQAQDRC----- 691 Query: 157 RQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 + G + V VY L+ NTID+ +++R K ++ L++ Sbjct: 692 HRIGQTKPVVVYRLVTANTIDQKIVERAAAKRKLEKLII 730 >gi|291398984|ref|XP_002715711.1| PREDICTED: RAD54-like protein [Oryctolagus cuniculus] Length = 755 Score = 104 bits (259), Expect = 9e-21, Method: Composition-based stats. Identities = 28/139 (20%), Positives = 57/139 (41%), Gaps = 18/139 (12%) Query: 70 PIIVAYHFNSDLARLQK----------AFPQGRTLDKDPCTIQEWNEGKIP--LLFAHPA 117 +++ ++ L +K ++ K ++ +N P + Sbjct: 523 KVVLVSNYTQTLDLFEKLCRARRYLYVRLDGTMSIKKRAKVVERFNSPTSPDFVFMLSSK 582 Query: 118 SCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 + G GLNL G N LV F W+ +Q + R+ + G K+ ++Y L++ TI+ Sbjct: 583 AGGCGLNL-IGANRLVMFDPDWNPANDEQAMARVW-----RDGQKKTCYIYRLLSAGTIE 636 Query: 178 ELVLQRLRTKSTIQDLLLN 196 E + QR K + +++ Sbjct: 637 EKIFQRQSHKKALSSCVVD 655 >gi|221508291|gb|EEE33878.1| helicase, putative [Toxoplasma gondii VEG] Length = 998 Score = 104 bits (259), Expect = 9e-21, Method: Composition-based stats. Identities = 35/162 (21%), Positives = 62/162 (38%), Gaps = 22/162 (13%) Query: 52 HDEKIKAL-EVIIE---KANAAPIIVAYHFNSDLARLQKAFPQG-----------RTLDK 96 KI+AL + ++E + +V F S L ++ +G + + Sbjct: 824 SSTKIEALYQELLEIEREDTTVKSLVFSQFCSMLDLIEWRLKKGGIHCAKMVGSMSIVSR 883 Query: 97 DPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 N+ + +L + G GLNLQ + + WW+ Q I+R Sbjct: 884 SNVLYAFNNDPSLKVLLISLKAGGEGLNLQI-ASRIFLMDPWWNPAAEMQAIQR-----A 937 Query: 157 RQAGFK-RAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + G + + V IA+ TI+E +LQ K + D + A Sbjct: 938 HRIGQRHKEVIAIRFIAEKTIEERILQLQEKKQLVFDGTVGA 979 >gi|73998082|ref|XP_859465.1| PREDICTED: similar to helicase, lymphoid-specific isoform 9 [Canis familiaris] Length = 692 Score = 104 bits (259), Expect = 9e-21, Method: Composition-based stats. Identities = 26/153 (16%), Positives = 58/153 (37%), Gaps = 19/153 (12%) Query: 58 ALEVIIEKANAAPIIVAYHFNSDLARLQK----------AFPQGRTLDKDPCTIQEWN-E 106 L + KA +++ L L + + + +N + Sbjct: 548 MLPEL--KARGHKVLLFSQMTRMLDILMDYCHFRNFNFSRLDGSMSYSEREKNMHSFNTD 605 Query: 107 GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVF 166 + + + G G+NL + ++ + W+ + Q +R + G + V Sbjct: 606 PDVFIFLVSTRAGGLGINLT-AADTVIIYDSDWNPQSDLQAQDRC-----HRIGQTKPVV 659 Query: 167 VYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 VY L+ NTID+ +++R K ++ L+++ K Sbjct: 660 VYRLVTANTIDQKIVERAAAKRKLEKLIIHKSK 692 >gi|291398172|ref|XP_002715776.1| PREDICTED: transcription termination factor, RNA polymerase II [Oryctolagus cuniculus] Length = 1163 Score = 104 bits (259), Expect = 1e-20, Method: Composition-based stats. Identities = 31/150 (20%), Positives = 61/150 (40%), Gaps = 17/150 (11%) Query: 59 LEVIIEKANAAPIIVAYHFNSDLA----RLQKAFPQGRTLDKDPCT------IQEWNEGK 108 LE I + + ++ + S L L++ T+D ++ +N Sbjct: 1001 LEAIRSNSKSQKSVIVSQWTSMLKVVALHLKRHGLTYATIDGSVNPKQRMDLVEAFNRSS 1060 Query: 109 IP-LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFV 167 P ++ + G GLNL GGN L + W+ Q +RI + G ++ V + Sbjct: 1061 GPQVMLISLLAGGVGLNLT-GGNHLFLLDMHWNPSLEDQACDRI-----YRVGQQKDVVI 1114 Query: 168 YYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + + + T++E +LQ K + +L+ Sbjct: 1115 HRFVCEGTVEEKILQLQEKKKDLAKQVLSG 1144 >gi|22326612|ref|NP_196132.2| SNF2 domain-containing protein / helicase domain-containing protein / RING finger domain-containing protein [Arabidopsis thaliana] gi|20260624|gb|AAM13210.1| helicase-like transcription factor-like protein [Arabidopsis thaliana] gi|31711770|gb|AAP68241.1| At5g05130 [Arabidopsis thaliana] gi|332003449|gb|AED90832.1| DNA/RNA helicase [Arabidopsis thaliana] Length = 862 Score = 104 bits (259), Expect = 1e-20, Method: Composition-based stats. Identities = 34/161 (21%), Positives = 64/161 (39%), Gaps = 22/161 (13%) Query: 54 EKIKALEVIIEKANAAPIIVAYHFNSDLARLQK----------AFPQGRTLDKDPCTIQE 103 + L ++ +V F L L+ T+ K I E Sbjct: 692 ALLSLLMASRQENPNTKSVVFSQFRKMLLLLETPLKAAGFTILRLDGAMTVKKRTQVIGE 751 Query: 104 WNEGKIP---LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 + ++ +L A + G G+NL + + F WW+ +Q ++RI + G Sbjct: 752 FGNPELTGPVVLLASLKASGTGINLT-AASRVYLFDPWWNPAVEEQAMDRI-----HRIG 805 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 K+ V + +IA+N+I+E VL+ + K + + A K+ Sbjct: 806 QKQEVKMIRMIARNSIEERVLELQQKKKNLAN---EAFKRR 843 >gi|60390959|sp|Q9FF61|SM3L1_ARATH RecName: Full=Putative SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 3-like 1; Short=SMARCA3-like protein 1 gi|10178052|dbj|BAB11535.1| helicase-like transcription factor-like protein [Arabidopsis thaliana] Length = 881 Score = 104 bits (259), Expect = 1e-20, Method: Composition-based stats. Identities = 34/161 (21%), Positives = 64/161 (39%), Gaps = 22/161 (13%) Query: 54 EKIKALEVIIEKANAAPIIVAYHFNSDLARLQK----------AFPQGRTLDKDPCTIQE 103 + L ++ +V F L L+ T+ K I E Sbjct: 711 ALLSLLMASRQENPNTKSVVFSQFRKMLLLLETPLKAAGFTILRLDGAMTVKKRTQVIGE 770 Query: 104 WNEGKIP---LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 + ++ +L A + G G+NL + + F WW+ +Q ++RI + G Sbjct: 771 FGNPELTGPVVLLASLKASGTGINLT-AASRVYLFDPWWNPAVEEQAMDRI-----HRIG 824 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 K+ V + +IA+N+I+E VL+ + K + + A K+ Sbjct: 825 QKQEVKMIRMIARNSIEERVLELQQKKKNLAN---EAFKRR 862 >gi|156089179|ref|XP_001611996.1| DNA repair protein rhp16 [Babesia bovis T2Bo] gi|154799250|gb|EDO08428.1| DNA repair protein rhp16, putative [Babesia bovis] Length = 1289 Score = 104 bits (259), Expect = 1e-20, Method: Composition-based stats. Identities = 31/170 (18%), Positives = 60/170 (35%), Gaps = 26/170 (15%) Query: 52 HDEKIKAL----EVIIEKANAAPIIVAYHFNSDLARLQKAFPQG-----------RTLDK 96 KI+AL ++ + I V + S L + + + Sbjct: 1117 SSTKIEALFQELTTVLTTTSDKSI-VFSQYCSMLDLIAYRLKTANIECAVLVGNTKIESR 1175 Query: 97 DPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 ++ + ++ + G GLNLQ N + WW+ Q I+R Sbjct: 1176 RNILLEFNKNPSLRVMLISLNAGGEGLNLQI-ANRIFLMDPWWNPAAELQAIQR-----A 1229 Query: 157 RQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL----NALKKET 202 + G + V+ I ++TI+E ++ K + D + ++KK T Sbjct: 1230 HRIGQTKPVYAIRFICKDTIEERIIALQEKKMILFDATICSSGESMKKLT 1279 >gi|268534396|ref|XP_002632329.1| Hypothetical protein CBG00336 [Caenorhabditis briggsae] Length = 753 Score = 104 bits (259), Expect = 1e-20, Method: Composition-based stats. Identities = 37/161 (22%), Positives = 71/161 (44%), Gaps = 21/161 (13%) Query: 53 DEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKA---------FPQGRTLDKDPC-T 100 K+ AL +++ + +V ++ L +++ G+T +D Sbjct: 434 SGKLYALADMLKCFRMLQECTVVVSNYIETLDMIEQLCAYLEFRVFRLDGKTQVQDRQKL 493 Query: 101 IQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQ 158 ++ +N+ + P + + G GLNL G + LV F W+ QQ + RI + Sbjct: 494 VRNFNDQRDPSNIFLLSTKAGGVGLNL-IGASRLVLFDSDWNPANDQQAMARIW-----R 547 Query: 159 AGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 G R +Y LI TI+E +LQR K+ + +++A++ Sbjct: 548 DGQVRPCHIYRLITTGTIEEKMLQRQIKKTGL-GCVIDAIE 587 >gi|73998072|ref|XP_859283.1| PREDICTED: similar to helicase, lymphoid-specific isoform 4 [Canis familiaris] Length = 707 Score = 104 bits (259), Expect = 1e-20, Method: Composition-based stats. Identities = 25/149 (16%), Positives = 56/149 (37%), Gaps = 19/149 (12%) Query: 58 ALEVIIEKANAAPIIVAYHFNSDLARLQK----------AFPQGRTLDKDPCTIQEWN-E 106 L + KA +++ L L + + + +N + Sbjct: 476 MLPEL--KARGHKVLLFSQMTRMLDILMDYCHFRNFNFSRLDGSMSYSEREKNMHSFNTD 533 Query: 107 GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVF 166 + + + G G+NL + ++ + W+ + Q +R + G + V Sbjct: 534 PDVFIFLVSTRAGGLGINLT-AADTVIIYDSDWNPQSDLQAQDRC-----HRIGQTKPVV 587 Query: 167 VYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 VY L+ NTID+ +++R K ++ L++ Sbjct: 588 VYRLVTANTIDQKIVERAAAKRKLEKLII 616 >gi|224108163|ref|XP_002314744.1| chromatin remodeling complex subunit [Populus trichocarpa] gi|222863784|gb|EEF00915.1| chromatin remodeling complex subunit [Populus trichocarpa] Length = 752 Score = 104 bits (259), Expect = 1e-20, Method: Composition-based stats. Identities = 30/158 (18%), Positives = 61/158 (38%), Gaps = 19/158 (12%) Query: 53 DEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQ---------KAFPQGRTLDKDPCTI 101 K +AL ++ +++ + S L L+ G T + I Sbjct: 578 SAKCRALAELLPDLKKCGHRVLIFSQWTSMLDILEWTLDVLGVTYRRLDGSTQVTERQAI 637 Query: 102 QE--WNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQA 159 + N+ I + G GLNL G + ++ L ++ + +Q +R + Sbjct: 638 VDAFNNDTSISACLLSTRAGGQGLNLT-GADTVIIHDLDFNPQIDRQAEDRC-----HRI 691 Query: 160 GFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 G + V +Y L+ + T+DE V + + K + +L + Sbjct: 692 GQTKPVTIYRLVTKGTVDENVYEIAKRKLVLDAAVLES 729 >gi|164659754|ref|XP_001731001.1| hypothetical protein MGL_2000 [Malassezia globosa CBS 7966] gi|159104899|gb|EDP43787.1| hypothetical protein MGL_2000 [Malassezia globosa CBS 7966] Length = 1627 Score = 104 bits (259), Expect = 1e-20, Method: Composition-based stats. Identities = 31/155 (20%), Positives = 68/155 (43%), Gaps = 19/155 (12%) Query: 55 KIKALEVIIEKA--NAAPIIVAYHFNSDLARLQKAF---------PQGRTLDKDPCTI-Q 102 K++ L+ ++ + + +++ L L+K F G T + + + Sbjct: 1300 KLQQLDTLMRRLVTDGHRVLIFTQMTKVLDILEKFFNYHGYRYLRLDGATKVEQRQALTE 1359 Query: 103 EWNEG-KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGF 161 +N +I S G G+NL G + ++F+ L W+ Q ++R + G Sbjct: 1360 RFNRDSRISAFILSTRSGGLGINL-VGADTVIFYDLDWNAAIESQCMDR-----AHRIGQ 1413 Query: 162 KRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 R V +Y ++++TI+E +L++ K + L++ Sbjct: 1414 TRDVHIYRFVSEHTIEENMLRKANQKRRLDQLVIQ 1448 >gi|12232371|ref|NP_032260.2| lymphocyte-specific helicase [Mus musculus] gi|81910423|sp|Q60848|HELLS_MOUSE RecName: Full=Lymphocyte-specific helicase; AltName: Full=Proliferation-associated SNF2-like protein gi|12002696|gb|AAG43373.1|AF155210_1 proliferation associated SNF2-like protein [Mus musculus] gi|12061562|gb|AAB08015.2| lymphocyte specific helicase [Mus musculus] gi|74151148|dbj|BAE27697.1| unnamed protein product [Mus musculus] gi|148709866|gb|EDL41812.1| helicase, lymphoid specific [Mus musculus] Length = 821 Score = 104 bits (259), Expect = 1e-20, Method: Composition-based stats. Identities = 28/159 (17%), Positives = 60/159 (37%), Gaps = 19/159 (11%) Query: 50 EVHDEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQK----------AFPQGRTLDKD 97 + K L+ ++ + ++V S L L + + Sbjct: 578 VTNSGKFLILDRMLPELKKRGHKVLVFSQMTSMLDILMDYCHLRNFIFSRLDGSMSYSER 637 Query: 98 PCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 I +N + + L + G G+NL + ++ + W+ + Q +R Sbjct: 638 EKNIYSFNTDPDVFLFLVSTRAGGLGINLT-AADTVIIYDSDWNPQSDLQAQDRC----- 691 Query: 157 RQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 + G + V VY L+ NTID+ +++R K ++ L++ Sbjct: 692 HRIGQTKPVVVYRLVTANTIDQKIVERAAAKRKLEKLII 730 >gi|309366189|emb|CAP21805.2| hypothetical protein CBG_00336 [Caenorhabditis briggsae AF16] Length = 1062 Score = 104 bits (259), Expect = 1e-20, Method: Composition-based stats. Identities = 37/161 (22%), Positives = 71/161 (44%), Gaps = 21/161 (13%) Query: 53 DEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKA---------FPQGRTLDKDPC-T 100 K+ AL +++ + +V ++ L +++ G+T +D Sbjct: 650 SGKLYALADMLKCFRMLQECTVVVSNYIETLDMIEQLCAYLEFRVFRLDGKTQVQDRQKL 709 Query: 101 IQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQ 158 ++ +N+ + P + + G GLNL G + LV F W+ QQ + RI + Sbjct: 710 VRNFNDQRDPSNIFLLSTKAGGVGLNL-IGASRLVLFDSDWNPANDQQAMARIW-----R 763 Query: 159 AGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 G R +Y LI TI+E +LQR K+ + +++A++ Sbjct: 764 DGQVRPCHIYRLITTGTIEEKMLQRQIKKTGL-GCVIDAIE 803 >gi|119627334|gb|EAX06929.1| RAD54-like (S. cerevisiae), isoform CRA_a [Homo sapiens] Length = 567 Score = 104 bits (259), Expect = 1e-20, Method: Composition-based stats. Identities = 28/139 (20%), Positives = 57/139 (41%), Gaps = 18/139 (12%) Query: 70 PIIVAYHFNSDLARLQK----------AFPQGRTLDKDPCTIQEWNEGKIP--LLFAHPA 117 +++ ++ L +K ++ K ++ +N P + Sbjct: 335 KVVLVSNYTQTLDLFEKLCRARRYLYVRLDGTMSIKKRAKVVERFNSPSSPDFVFMLSSK 394 Query: 118 SCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 + G GLNL G N LV F W+ +Q + R+ + G K+ ++Y L++ TI+ Sbjct: 395 AGGCGLNL-IGANRLVMFDPDWNPANDEQAMARVW-----RDGQKKTCYIYRLLSAGTIE 448 Query: 178 ELVLQRLRTKSTIQDLLLN 196 E + QR K + +++ Sbjct: 449 EKIFQRQSHKKALSSCVVD 467 >gi|126344594|ref|XP_001379453.1| PREDICTED: similar to Snf2-related CBP activator protein,, partial [Monodelphis domestica] Length = 3130 Score = 104 bits (259), Expect = 1e-20, Method: Composition-based stats. Identities = 33/156 (21%), Positives = 66/156 (42%), Gaps = 19/156 (12%) Query: 55 KIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAF---------PQGRTLDKDPCTI-Q 102 K++ L V++ + A A +++ L L++ G T + + + Sbjct: 2064 KLQTLAVLLRRLKAGAHRVLIFTQMTRMLDVLEQFLTYHGHLYLRLDGSTRVEQRQALME 2123 Query: 103 EWNEGK-IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGF 161 +N K I S G G+NL G + ++F+ W+ Q +R + G Sbjct: 2124 RFNADKRIFCFILSTRSGGVGVNLT-GADTVIFYDSDWNPTMDAQAQDRC-----HRIGQ 2177 Query: 162 KRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 R V +Y LI++ T++E +L++ K + D+ + Sbjct: 2178 TRDVHIYRLISERTVEENILKKANQKRMLGDMAIEG 2213 >gi|292630891|sp|B5VE38|RDH54_YEAS6 RecName: Full=DNA repair and recombination protein RDH54; AltName: Full=RAD homolog 54; AltName: Full=Recombination factor TID1; AltName: Full=Two hybrid interaction with DMC1 protein 1; Includes: RecName: Full=DNA topoisomerase; Includes: RecName: Full=Putative helicase gi|207347718|gb|EDZ73802.1| YBR073Wp-like protein [Saccharomyces cerevisiae AWRI1631] Length = 924 Score = 103 bits (258), Expect = 1e-20, Method: Composition-based stats. Identities = 34/162 (20%), Positives = 60/162 (37%), Gaps = 20/162 (12%) Query: 48 WKEVHDEKIKALEVIIE---KANAAPIIVAYHFNSDLARLQKAFPQGR-----------T 93 + ++ K++ L ++E K ++V ++ L ++ Sbjct: 624 SRSLNSGKLRVLMTLLEGIRKGTKEKVVVVSNYTQTLDIIENLMNMAGMSHCRLDGSIPA 683 Query: 94 LDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGV 153 +D I S G GLNL G + L+ F W+ Q + RI Sbjct: 684 KQRDSIVTSFNRNPAIFGFLLSAKSGGVGLNL-VGASRLILFDNDWNPSVDLQAMSRI-- 740 Query: 154 TRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 + G K+ F+Y L+ IDE +LQR K+++ L Sbjct: 741 ---HRDGQKKPCFIYRLVTTGCIDEKILQRQLMKNSLSQKFL 779 >gi|292630869|sp|B3LN76|RDH54_YEAS1 RecName: Full=DNA repair and recombination protein RDH54; AltName: Full=RAD homolog 54; AltName: Full=Recombination factor TID1; AltName: Full=Two hybrid interaction with DMC1 protein 1; Includes: RecName: Full=DNA topoisomerase; Includes: RecName: Full=Putative helicase gi|190408764|gb|EDV12029.1| helicase [Saccharomyces cerevisiae RM11-1a] Length = 924 Score = 103 bits (258), Expect = 1e-20, Method: Composition-based stats. Identities = 34/162 (20%), Positives = 60/162 (37%), Gaps = 20/162 (12%) Query: 48 WKEVHDEKIKALEVIIE---KANAAPIIVAYHFNSDLARLQKAFPQGR-----------T 93 + ++ K++ L ++E K ++V ++ L ++ Sbjct: 624 SRSLNSGKLRVLMTLLEGIRKGTKEKVVVVSNYTQTLDIIENLMNMAGMSHCRLDGSIPA 683 Query: 94 LDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGV 153 +D I S G GLNL G + L+ F W+ Q + RI Sbjct: 684 KQRDSIVTSFNRNPAIFGFLLSAKSGGVGLNL-VGASRLILFDNDWNPSVDLQAMSRI-- 740 Query: 154 TRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 + G K+ F+Y L+ IDE +LQR K+++ L Sbjct: 741 ---HRDGQKKPCFIYRLVTTGCIDEKILQRQLMKNSLSQKFL 779 >gi|292630870|sp|A6ZL17|RDH54_YEAS7 RecName: Full=DNA repair and recombination protein RDH54; AltName: Full=RAD homolog 54; AltName: Full=Recombination factor TID1; AltName: Full=Two hybrid interaction with DMC1 protein 1; Includes: RecName: Full=DNA topoisomerase; Includes: RecName: Full=Putative helicase gi|151946464|gb|EDN64686.1| rad54-like protein [Saccharomyces cerevisiae YJM789] Length = 924 Score = 103 bits (258), Expect = 1e-20, Method: Composition-based stats. Identities = 34/162 (20%), Positives = 60/162 (37%), Gaps = 20/162 (12%) Query: 48 WKEVHDEKIKALEVIIE---KANAAPIIVAYHFNSDLARLQKAFPQGR-----------T 93 + ++ K++ L ++E K ++V ++ L ++ Sbjct: 624 SRSLNSGKLRVLMTLLEGIRKGTKEKVVVVSNYTQTLDIIENLMNMAGMSHCRLDGSIPA 683 Query: 94 LDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGV 153 +D I S G GLNL G + L+ F W+ Q + RI Sbjct: 684 KQRDSIVTSFNRNPAIFGFLLSAKSGGVGLNL-VGASRLILFDNDWNPSVDLQAMSRI-- 740 Query: 154 TRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 + G K+ F+Y L+ IDE +LQR K+++ L Sbjct: 741 ---HRDGQKKPCFIYRLVTTGCIDEKILQRQLMKNSLSQKFL 779 >gi|26378644|dbj|BAB28757.2| unnamed protein product [Mus musculus] Length = 808 Score = 103 bits (258), Expect = 1e-20, Method: Composition-based stats. Identities = 28/159 (17%), Positives = 60/159 (37%), Gaps = 19/159 (11%) Query: 50 EVHDEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQK----------AFPQGRTLDKD 97 + K L+ ++ + ++V S L L + + Sbjct: 565 VTNSGKFLILDRMLPELKKRGHKVLVFSQMTSMLDILMDYCHLRNFIFSRLDGSMSYSER 624 Query: 98 PCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 I +N + + L + G G+NL + ++ + W+ + Q +R Sbjct: 625 EKNIYSFNTDPDVFLFLVSTRAGGLGINLT-AADTVIIYDSDWNPQSDLQAQDRC----- 678 Query: 157 RQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 + G + V VY L+ NTID+ +++R K ++ L++ Sbjct: 679 HRIGQTKPVVVYRLVTANTIDQKIVERAAAKRKLEKLII 717 >gi|123123061|emb|CAM19309.1| SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1 [Mus musculus] Length = 768 Score = 103 bits (258), Expect = 1e-20, Method: Composition-based stats. Identities = 43/242 (17%), Positives = 91/242 (37%), Gaps = 52/242 (21%) Query: 1 MKQY---HKFQRELYCDLQGENIEAFNSASKTVK------CLQL---ANGAVYYD----- 43 +K Y K QRE Y + ++I+ NS+ K K +QL N +D Sbjct: 412 IKIYLGLSKMQREWYTKILMKDIDVLNSSGKMDKMRLLNILMQLRKCCNHPYLFDGAEPG 471 Query: 44 ---EEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQ---------KAFP 89 + K+ AL+ ++ + + +++ L L+ + Sbjct: 472 PPYTTDEHIVGNSGKMVALDKLLARIKEQGSRVLIFSQMTRLLDILEDYCMWRGYEYSRL 531 Query: 90 QGRTLDKDPCT-------------IQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVF 134 G+T ++ I +N + + G G+NL ++++ Sbjct: 532 DGQTPHEEREDKFLEVELLGQREAIDAFNAPNSSKFIFMLSTRAGGLGINL-ASADVVIL 590 Query: 135 FSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 + W+ + Q ++R + G K+ V V+ LI NT++E +++R K + ++ Sbjct: 591 YDSDWNPQVDLQAMDR-----AHRIGQKKPVRVFRLITDNTVEERIVERAEIKLRLDSIV 645 Query: 195 LN 196 + Sbjct: 646 IQ 647 >gi|302791647|ref|XP_002977590.1| hypothetical protein SELMODRAFT_450749 [Selaginella moellendorffii] gi|300154960|gb|EFJ21594.1| hypothetical protein SELMODRAFT_450749 [Selaginella moellendorffii] Length = 2094 Score = 103 bits (258), Expect = 1e-20, Method: Composition-based stats. Identities = 34/167 (20%), Positives = 71/167 (42%), Gaps = 19/167 (11%) Query: 44 EEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQ---------KAFPQGR 92 ++ + K++ L V++ + + ++ L L+ G Sbjct: 1103 PDRRLLQFDCGKLQQLSVLLRRLKSEGHRALIFTQMTKMLDILESFINLYGYNYMRLDGS 1162 Query: 93 TLDKDPCTI-QEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 T + + Q +N KI L S G G+NL G + ++F+ W+ QQ +R Sbjct: 1163 TKPEQRQILMQRFNTNPKIFLFILSTRSGGVGINL-VGADTVIFYDSDWNPAMDQQAQDR 1221 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + G R V +Y L++++TI+E +L++ K + +L++ + Sbjct: 1222 C-----HRIGQTREVHIYRLVSESTIEENILKKANQKRFLDNLVIQS 1263 >gi|7022306|dbj|BAA91550.1| unnamed protein product [Homo sapiens] gi|55662168|emb|CAH70224.1| helicase, lymphoid-specific [Homo sapiens] Length = 310 Score = 103 bits (258), Expect = 1e-20, Method: Composition-based stats. Identities = 25/159 (15%), Positives = 61/159 (38%), Gaps = 19/159 (11%) Query: 50 EVHDEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQK----------AFPQGRTLDKD 97 + K L+ ++ + +++ S L L + + Sbjct: 32 VTNSGKFLILDRMLPELKKRGHKVLLFSQMTSMLDILMDYCHLRDFNFSRLDGSMSYSER 91 Query: 98 PCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 + +N + ++ + + G G+NL + ++ + W+ + Q +R Sbjct: 92 EKNMHSFNTDPEVFIFLVSTRAGGLGINLT-AADTVIIYDSDWNPQSDLQAQDRC----- 145 Query: 157 RQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 + G + V VY L+ NTID+ +++R K ++ L++ Sbjct: 146 HRIGQTKPVVVYRLVTANTIDQKIVERAAAKRKLEKLII 184 >gi|67538626|ref|XP_663087.1| hypothetical protein AN5483.2 [Aspergillus nidulans FGSC A4] gi|40743453|gb|EAA62643.1| hypothetical protein AN5483.2 [Aspergillus nidulans FGSC A4] gi|259485068|tpe|CBF81824.1| TPA: ATP-dependent DNA helicase (Eurofung) [Aspergillus nidulans FGSC A4] Length = 1184 Score = 103 bits (258), Expect = 1e-20, Method: Composition-based stats. Identities = 43/212 (20%), Positives = 81/212 (38%), Gaps = 38/212 (17%) Query: 9 RELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIE---- 64 R+ +L+ E + N SK +L EK W + KI+ II Sbjct: 970 RKTLAELKKEA--SKNQESKRKYLRRL---------EKTW--ITSAKIEKTMEIIRDIER 1016 Query: 65 KANAAPIIVAYHFNSDLARLQKAFPQGRT-------------LDKDPCTIQEWNEGKIPL 111 + N II+ F S L L+ P R D++ + ++ + Sbjct: 1017 RDNNEKIIIFSQFTSLLDLLE--IPIAREGHRYRRYDGSMKPADRNSAVLDFTDDPSCKV 1074 Query: 112 LFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLI 171 + + GLNL N ++ F +W+ +Q ++R + G R V V+ ++ Sbjct: 1075 MLVSLKAGNSGLNL-VAANHVIIFDPFWNPYVEEQAVDR-----AHRIGQLREVHVHRIL 1128 Query: 172 AQNTIDELVLQRLRTKSTIQDLLLNALKKETI 203 T+++ +++ K I D L+ + + I Sbjct: 1129 VPETVEDRIIELQDKKRAIIDGALDEKESKNI 1160 >gi|157103787|ref|XP_001648130.1| helicase [Aedes aegypti] gi|108880485|gb|EAT44710.1| helicase [Aedes aegypti] Length = 1027 Score = 103 bits (258), Expect = 1e-20, Method: Composition-based stats. Identities = 47/222 (21%), Positives = 88/222 (39%), Gaps = 37/222 (16%) Query: 6 KFQRELYCDLQGENIEAFNSASKTVK------CLQL---ANGAVYYD--EEKHWKEV--- 51 K QRE Y + ++I+ N A K K +QL N +D E Sbjct: 379 KMQREWYTKILMKDIDIVNGAGKMEKMRLQNILMQLRKCTNHPYLFDGAEPGPPYTTDYH 438 Query: 52 ---HDEKIKALEVIIEKAN--AAPIIVAYHFNSDLARL---------QKAFPQGRTLDKD 97 + K+ L+ ++ K + ++V L L Q G+T +D Sbjct: 439 LLENSGKMVVLDKLLTKLQEQGSRVLVFSQMTRMLDILEDYCYWRGYQYCRLDGQTPHED 498 Query: 98 P-CTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 I E+N + + G G+NL ++++ + W+ + Q ++R Sbjct: 499 RTKMIDEYNAENSSKFIFMLSTRAGGLGINL-ATADVVIIYDSDWNPQMDLQAMDR---- 553 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + G K+ V V+ LI +NT++E +++R K + L++ Sbjct: 554 -AHRIGQKKQVRVFRLITENTVEEKIVERAEIKLKLDKLVIQ 594 >gi|254585925|ref|XP_002498530.1| ZYRO0G12474p [Zygosaccharomyces rouxii] gi|238941424|emb|CAR29597.1| ZYRO0G12474p [Zygosaccharomyces rouxii] Length = 901 Score = 103 bits (258), Expect = 1e-20, Method: Composition-based stats. Identities = 33/166 (19%), Positives = 61/166 (36%), Gaps = 21/166 (12%) Query: 50 EVHDEKIKALEVIIE----KANAAPIIVAYHFNSDLARLQKAFPQGR----------TLD 95 E + K++ L ++ + + ++V ++ L ++ Sbjct: 597 EYNSGKLRVLMKLLNQIKIETTSDKVVVISNYTQTLDIIENLMASAGMSSCRLDGSTPAK 656 Query: 96 KDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 + + +N I S G GLNL G L+ F W+ Q + RI Sbjct: 657 QRDAIVNNFNHNPSIFAFLLSAKSGGVGLNL-IGACRLILFDNDWNPSVDLQAMSRI--- 712 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKK 200 + G K+ ++Y L+ IDE +LQR K+ + L+ K Sbjct: 713 --HRDGQKKPCYIYRLVTTGCIDEKILQRQLMKNCLSQKFLSDTKS 756 >gi|47219154|emb|CAG01817.1| unnamed protein product [Tetraodon nigroviridis] Length = 1805 Score = 103 bits (258), Expect = 1e-20, Method: Composition-based stats. Identities = 30/182 (16%), Positives = 66/182 (36%), Gaps = 41/182 (22%) Query: 45 EKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRT--------- 93 +K + K+ L+V++ + + +++ + L++ + Sbjct: 1269 DKESLIMESGKLHTLDVLLSRLKSQGHRVLIYSQMTRMIDLLEEYMVYRKHTYMRLDGSS 1328 Query: 94 -LDKDPCTIQEWNEG-KIPLLFAHPASCGHGLNLQYGGNI-------------------- 131 + + + ++ I + + G G+NL + Sbjct: 1329 KISERRDMVADFQSRTDIFVFLLSTRAGGLGINLTAADTVSGGRSSSGSARTGHVGDVVL 1388 Query: 132 ---LVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKS 188 ++F+ W+ QQ ++R + G + V VY LI Q TI+E +LQR + KS Sbjct: 1389 LFQVIFYDSDWNPTVDQQAMDR-----AHRLGQTKQVTVYRLICQGTIEERILQRAKEKS 1443 Query: 189 TI 190 + Sbjct: 1444 EV 1445 >gi|237833999|ref|XP_002366297.1| SNF2/RAD54 helicase family protein [Toxoplasma gondii ME49] gi|211963961|gb|EEA99156.1| SNF2/RAD54 helicase family protein [Toxoplasma gondii ME49] Length = 1667 Score = 103 bits (258), Expect = 1e-20, Method: Composition-based stats. Identities = 35/162 (21%), Positives = 62/162 (38%), Gaps = 22/162 (13%) Query: 52 HDEKIKAL-EVIIE---KANAAPIIVAYHFNSDLARLQKAFPQG-----------RTLDK 96 KI+AL + ++E + +V F S L ++ +G + + Sbjct: 1493 SSTKIEALYQELLEIEREDTTVKSLVFSQFCSMLDLIEWRLKKGGIHCAKMVGSMSIVSR 1552 Query: 97 DPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 N+ + +L + G GLNLQ + + WW+ Q I+R Sbjct: 1553 SNVLYAFNNDPSLKVLLISLKAGGEGLNLQI-ASRIFLMDPWWNPAAEMQAIQR-----A 1606 Query: 157 RQAGFK-RAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + G + + V IA+ TI+E +LQ K + D + A Sbjct: 1607 HRIGQRHKEVIAIRFIAEKTIEERILQLQEKKQLVFDGTVGA 1648 >gi|326923617|ref|XP_003208031.1| PREDICTED: lymphoid-specific helicase-like [Meleagris gallopavo] Length = 871 Score = 103 bits (258), Expect = 1e-20, Method: Composition-based stats. Identities = 29/157 (18%), Positives = 64/157 (40%), Gaps = 19/157 (12%) Query: 52 HDEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQ-----KAFPQGRT------LDKDP 98 + K L+ ++ + +++ L L ++F R D++ Sbjct: 629 NSGKFLLLDRMLPELKKRGHKVLMFSQMTMMLDILMDYCYLRSFKFSRLDGSMSYSDREE 688 Query: 99 CTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQ 158 Q N+ ++ L + G G+NL + ++ + W+ + Q +R + Sbjct: 689 NMHQFNNDPEVFLFLVSTRAGGLGINLT-AADTVIIYDSDWNPQSDLQAQDRC-----HR 742 Query: 159 AGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 G + V VY L+ NTID+ +++R K ++ L++ Sbjct: 743 IGQTKPVVVYRLVTANTIDQKIVERAAAKRKLEKLII 779 >gi|145295306|ref|YP_001138127.1| hypothetical protein cgR_1246 [Corynebacterium glutamicum R] gi|140845226|dbj|BAF54225.1| hypothetical protein [Corynebacterium glutamicum R] Length = 1034 Score = 103 bits (258), Expect = 1e-20, Method: Composition-based stats. Identities = 36/213 (16%), Positives = 73/213 (34%), Gaps = 26/213 (12%) Query: 3 QYHKFQRELYCDLQGENIEAFNSASK--TVKCLQLANGAVYYDEEKHWKEVH----DEKI 56 Y ++ L + + Q+ N ++ + + K+ Sbjct: 799 LYKALVEDVQKQLDERQGMSRKGLVLATITRIKQICNHPAHFLGDGSEVTLKGKHRSGKV 858 Query: 57 KALEVIIEKA--NAAPIIVAYHFNSD--------LARLQKAFP---QGRTLDKDPCTIQE 103 +AL +I+ A +++ + + RL P G T + E Sbjct: 859 EALMELIDTAVKEERRMLIFTQYAAFGRILAPYLSDRLGTNIPFLHGGVTKPGRDRMVAE 918 Query: 104 WNEGK-IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFK 162 + P + + G GLNL +I+V WW+ Q +R + G + Sbjct: 919 FQSEDGPPAMILSLKAGGTGLNLT-AASIVVHMDRWWNPAVENQATDR-----AFRIGQR 972 Query: 163 RAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 + V VY +I T++E + L K+ + ++ Sbjct: 973 KNVDVYKMITVGTMEESIQDILDGKTHLASAIV 1005 >gi|19552388|ref|NP_600390.1| putative helicase [Corynebacterium glutamicum ATCC 13032] gi|62390052|ref|YP_225454.1| SNF2 family DNA/RNA helicase [Corynebacterium glutamicum ATCC 13032] gi|21323931|dbj|BAB98557.1| Superfamily II DNA/RNA helicases, SNF2 family [Corynebacterium glutamicum ATCC 13032] gi|41325388|emb|CAF19868.1| Superfamily II DNA/RNA helicases, SNF2 family [Corynebacterium glutamicum ATCC 13032] Length = 1034 Score = 103 bits (258), Expect = 1e-20, Method: Composition-based stats. Identities = 36/213 (16%), Positives = 73/213 (34%), Gaps = 26/213 (12%) Query: 3 QYHKFQRELYCDLQGENIEAFNSASK--TVKCLQLANGAVYYDEEKHWKEVH----DEKI 56 Y ++ L + + Q+ N ++ + + K+ Sbjct: 799 LYKALVEDVQKQLDERQGMSRKGLVLATITRIKQICNHPAHFLGDGSEVTLKGKHRSGKV 858 Query: 57 KALEVIIEKA--NAAPIIVAYHFNSD--------LARLQKAFP---QGRTLDKDPCTIQE 103 +AL +I+ A +++ + + RL P G T + E Sbjct: 859 EALMELIDTAVKEERRMLIFTQYAAFGRILAPYLSDRLGTNIPFLHGGVTKPGRDRMVAE 918 Query: 104 WNEGK-IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFK 162 + P + + G GLNL +I+V WW+ Q +R + G + Sbjct: 919 FQSEDGPPAMILSLKAGGTGLNLT-AASIVVHMDRWWNPAVENQATDR-----AFRIGQR 972 Query: 163 RAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 + V VY +I T++E + L K+ + ++ Sbjct: 973 KNVDVYKMITVGTMEESIQDILDGKTHLASAIV 1005 >gi|123123062|emb|CAM19310.1| SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1 [Mus musculus] Length = 1033 Score = 103 bits (258), Expect = 1e-20, Method: Composition-based stats. Identities = 43/242 (17%), Positives = 91/242 (37%), Gaps = 52/242 (21%) Query: 1 MKQY---HKFQRELYCDLQGENIEAFNSASKTVK------CLQL---ANGAVYYD----- 43 +K Y K QRE Y + ++I+ NS+ K K +QL N +D Sbjct: 392 IKIYLGLSKMQREWYTKILMKDIDVLNSSGKMDKMRLLNILMQLRKCCNHPYLFDGAEPG 451 Query: 44 ---EEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQ---------KAFP 89 + K+ AL+ ++ + + +++ L L+ + Sbjct: 452 PPYTTDEHIVGNSGKMVALDKLLARIKEQGSRVLIFSQMTRLLDILEDYCMWRGYEYSRL 511 Query: 90 QGRTLDKDPCT-------------IQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVF 134 G+T ++ I +N + + G G+NL ++++ Sbjct: 512 DGQTPHEEREDKFLEVELLGQREAIDAFNAPNSSKFIFMLSTRAGGLGINL-ASADVVIL 570 Query: 135 FSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 + W+ + Q ++R + G K+ V V+ LI NT++E +++R K + ++ Sbjct: 571 YDSDWNPQVDLQAMDR-----AHRIGQKKPVRVFRLITDNTVEERIVERAEIKLRLDSIV 625 Query: 195 LN 196 + Sbjct: 626 IQ 627 >gi|320580035|gb|EFW94258.1| DNA helicase [Pichia angusta DL-1] Length = 395 Score = 103 bits (258), Expect = 1e-20, Method: Composition-based stats. Identities = 36/158 (22%), Positives = 65/158 (41%), Gaps = 22/158 (13%) Query: 53 DEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFP-----------QGRT-LDKDPCT 100 + + L+ I E+ +IV F S L ++K GR +D+ Sbjct: 223 NALLSHLQQIYEENPGDHVIVFSQFTSFLDLVEKELKSYTCNFRILKFDGRLNVDQRQRA 282 Query: 101 IQEWN----EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 + E+N +G+I +L + G GLNL + W+ Q I+RI Sbjct: 283 LNEFNTKTTDGRITILLISLKAGGVGLNLTI-ASKAFLLDPHWNNATEFQAIDRI----- 336 Query: 157 RQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 + G ++V V I + +I+E +L+ K+ + + L Sbjct: 337 HRVGQSKSVKVVRFIMEGSIEERMLKIQERKNQLGEAL 374 >gi|331238525|ref|XP_003331917.1| DNA repair protein RAD5 [Puccinia graminis f. sp. tritici CRL 75-36-700-3] gi|309310907|gb|EFP87498.1| DNA repair protein RAD5 [Puccinia graminis f. sp. tritici CRL 75-36-700-3] Length = 1036 Score = 103 bits (258), Expect = 1e-20, Method: Composition-based stats. Identities = 42/195 (21%), Positives = 74/195 (37%), Gaps = 29/195 (14%) Query: 11 LYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEV----IIEKA 66 + DL + +E N SK Q G + + W+ KI+AL + + Sbjct: 830 ITIDLSQDALEDENMGSKA---RQ---GVLDRLDPGKWR--TSTKIEALVEELSKLNQSD 881 Query: 67 NAAPIIVAYHFNSDLARLQKA-----FPQGR-----TLDKDPCTIQEW-NEGKIPLLFAH 115 + IV F L +++ F R T + TIQ + N + + Sbjct: 882 HTIKSIVFSQFTVFLDLIERRLQLAGFKLARLQGNMTPEARNRTIQYFMNNNDVQVFLVS 941 Query: 116 PASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNT 175 + G LNL + + WW+ Q ++RI + G R V V LI +N+ Sbjct: 942 LKAGGVALNLTEASRVFIM-DPWWNPAVELQAMDRI-----HRLGQHRPVVVTRLIIENS 995 Query: 176 IDELVLQRLRTKSTI 190 I+ +++ + K + Sbjct: 996 IESRIVELQKKKEAM 1010 >gi|307199888|gb|EFN80285.1| DNA repair and recombination protein RAD54B [Harpegnathos saltator] Length = 509 Score = 103 bits (258), Expect = 1e-20, Method: Composition-based stats. Identities = 36/145 (24%), Positives = 66/145 (45%), Gaps = 17/145 (11%) Query: 63 IEKANAAPIIVAYHF-NSDL-------ARLQKAFPQGRT-LDKDPCTIQEWNE--GKIPL 111 ++ N ++V+Y+ DL RL+ G T I+++N + + Sbjct: 256 LKNTNEKLVLVSYYTQTLDLLQTVCSVERLKYLRLDGATSTTTRSKVIEQFNTKTDESKI 315 Query: 112 LFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLI 171 L + G GLNL G + LV F W+ Q + RI + G K+ V++Y L+ Sbjct: 316 LLLSAKAGGVGLNL-PGASRLVLFDSDWNPASDMQAMARIW-----RDGQKKDVYIYRLL 369 Query: 172 AQNTIDELVLQRLRTKSTIQDLLLN 196 TI+E + QR +K+ + + +++ Sbjct: 370 TTGTIEEKIYQRQISKAGLSEFVVD 394 >gi|323451886|gb|EGB07762.1| hypothetical protein AURANDRAFT_37691 [Aureococcus anophagefferens] Length = 615 Score = 103 bits (258), Expect = 1e-20, Method: Composition-based stats. Identities = 37/189 (19%), Positives = 72/189 (38%), Gaps = 27/189 (14%) Query: 27 SKTVKCLQLANGAVYYDEEKHWKEVHDE-------KIKALEVIIEK--ANAAPIIVAYHF 77 S ++ + N ++ V D+ K+ L+ ++ K A ++ F Sbjct: 285 SLLMQLRKCCNHPYLFEGADPDPGVTDDALVEASGKLHVLDRLLTKLKAKGHRCVLFSQF 344 Query: 78 NSDLARL----QKAFPQGRTLDKDPC------TIQEWNEGK--IPLLFAHPASCGHGLNL 125 S L L + + LD IQ +N + L + G G+NL Sbjct: 345 TSTLDLLDDVLRYRGYEFSRLDGSTNRVQRTVDIQAFNAPGSGVFLFLMSTRAGGLGVNL 404 Query: 126 QYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLR 185 Q + + F W+ + Q + R+ + G + V VY L+ + T++E ++QR Sbjct: 405 QT-ADTCILFDSDWNPQADAQAMARV-----HRIGQTKPVHVYRLVTKGTVEERIVQRAE 458 Query: 186 TKSTIQDLL 194 K + ++ Sbjct: 459 KKLYLDSMV 467 >gi|224092566|ref|XP_002309665.1| chromatin remodeling complex subunit [Populus trichocarpa] gi|222855641|gb|EEE93188.1| chromatin remodeling complex subunit [Populus trichocarpa] Length = 1340 Score = 103 bits (258), Expect = 1e-20, Method: Composition-based stats. Identities = 29/166 (17%), Positives = 62/166 (37%), Gaps = 20/166 (12%) Query: 52 HDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQ---------KAFPQGRTLDKDPCT 100 K++ L+ ++ + +++ F L L+ G+ + Sbjct: 611 TSGKLQLLDKLMVRLKEQGHRVLIYSQFQHMLDLLEDYCTHKKWMYERIDGKVGGAERQV 670 Query: 101 -IQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 I +N + G G+NL + ++ + W+ Q + R Sbjct: 671 RIDRFNAKNSSRFCFLLSTRAGGLGINL-ATADTVIIYDSDWNPHADLQAMAR-----AH 724 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETI 203 + G V +Y LI + TI+E ++Q + K ++ L++ LK + I Sbjct: 725 RLGQTNKVLIYRLITRGTIEERMMQLTKKKMVLEHLVVGRLKAQNI 770 >gi|302786826|ref|XP_002975184.1| hypothetical protein SELMODRAFT_450747 [Selaginella moellendorffii] gi|300157343|gb|EFJ23969.1| hypothetical protein SELMODRAFT_450747 [Selaginella moellendorffii] Length = 2063 Score = 103 bits (258), Expect = 1e-20, Method: Composition-based stats. Identities = 34/167 (20%), Positives = 71/167 (42%), Gaps = 19/167 (11%) Query: 44 EEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQ---------KAFPQGR 92 ++ + K++ L V++ + + ++ L L+ G Sbjct: 1076 PDRRLLQFDCGKLQQLSVLLRRLKSEGHRALIFTQMTKMLDILESFINLYGYNYMRLDGS 1135 Query: 93 TLDKDPCTI-QEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 T + + Q +N KI L S G G+NL G + ++F+ W+ QQ +R Sbjct: 1136 TKPEQRQILMQRFNTNPKIFLFILSTRSGGVGINL-VGADTVIFYDSDWNPAMDQQAQDR 1194 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + G R V +Y L++++TI+E +L++ K + +L++ + Sbjct: 1195 C-----HRIGQTREVHIYRLVSESTIEENILKKANQKRFLDNLVIQS 1236 >gi|260949593|ref|XP_002619093.1| hypothetical protein CLUG_00252 [Clavispora lusitaniae ATCC 42720] gi|238846665|gb|EEQ36129.1| hypothetical protein CLUG_00252 [Clavispora lusitaniae ATCC 42720] Length = 351 Score = 103 bits (258), Expect = 1e-20, Method: Composition-based stats. Identities = 26/154 (16%), Positives = 62/154 (40%), Gaps = 16/154 (10%) Query: 53 DEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRT----------LDKDPCTIQ 102 ++ + ++ I IIV HF + + A Q +D TI+ Sbjct: 176 NKTLDLIKDITTSNLDEKIIVFSHFTTTFDLMGYALKQENIKYLRYDGSMNIDSKNATIK 235 Query: 103 EWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFK 162 ++ EG +L + GL L ++++ +W+ Q ++R + G Sbjct: 236 DFYEGNTRVLLLSLKAGNVGLTLTCASHVIIM-DPFWNPFVEDQAMDR-----AHRFGQM 289 Query: 163 RAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + V VY ++ ++++++ ++ K + + L+ Sbjct: 290 KPVHVYKILIRDSVEDRIMDLQERKKELINAALD 323 >gi|73998074|ref|XP_859321.1| PREDICTED: similar to helicase, lymphoid-specific isoform 5 [Canis familiaris] Length = 739 Score = 103 bits (258), Expect = 1e-20, Method: Composition-based stats. Identities = 25/149 (16%), Positives = 56/149 (37%), Gaps = 19/149 (12%) Query: 58 ALEVIIEKANAAPIIVAYHFNSDLARLQK----------AFPQGRTLDKDPCTIQEWN-E 106 L + KA +++ L L + + + +N + Sbjct: 508 MLPEL--KARGHKVLLFSQMTRMLDILMDYCHFRNFNFSRLDGSMSYSEREKNMHSFNTD 565 Query: 107 GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVF 166 + + + G G+NL + ++ + W+ + Q +R + G + V Sbjct: 566 PDVFIFLVSTRAGGLGINLT-AADTVIIYDSDWNPQSDLQAQDRC-----HRIGQTKPVV 619 Query: 167 VYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 VY L+ NTID+ +++R K ++ L++ Sbjct: 620 VYRLVTANTIDQKIVERAAAKRKLEKLII 648 >gi|327300239|ref|XP_003234812.1| hypothetical protein TERG_03864 [Trichophyton rubrum CBS 118892] gi|326462164|gb|EGD87617.1| hypothetical protein TERG_03864 [Trichophyton rubrum CBS 118892] Length = 777 Score = 103 bits (258), Expect = 1e-20, Method: Composition-based stats. Identities = 27/146 (18%), Positives = 55/146 (37%), Gaps = 18/146 (12%) Query: 66 ANAAPIIVAYHFNSDLARLQKAFPQGR------------TLDKDPCTIQEWNEGKIPLLF 113 + +++ F L L+ Q R D+ N+ + Sbjct: 547 SKGHKVLIFSQFKGQLDILEDWATQLRSWNCCRIDGAIAQADRQEQINAFNNDPDYRIFL 606 Query: 114 AHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQ 173 + G G+NL + ++ F W+ ++ Q R + G + V VY L + Sbjct: 607 LSTRAGGQGINLT-AADTVILFDSDWNPQQDLQA-----QDRAHRIGQTKPVIVYRLATR 660 Query: 174 NTIDELVLQRLRTKSTIQDLLLNALK 199 TI++ +L+R +K ++ L++ K Sbjct: 661 GTIEQTLLERAGSKRRLEKLVIQKGK 686 >gi|47459148|ref|YP_016010.1| SWF/SNF family helicase [Mycoplasma mobile 163K] gi|47458477|gb|AAT27799.1| swf/snf family helicase-like protein [Mycoplasma mobile 163K] Length = 958 Score = 103 bits (258), Expect = 1e-20, Method: Composition-based stats. Identities = 42/164 (25%), Positives = 72/164 (43%), Gaps = 19/164 (11%) Query: 46 KHWKEVHDEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQKAFPQ---------GRTL 94 K K EK+ +I+ +++ F ++ +K F + G+T Sbjct: 783 KSDKFDTSEKLNYCINLIKSIKLLKQKVLIFTQFTKNIPFFEKNFIKSNIKYDIISGKTN 842 Query: 95 DKDPCTIQE-WNEG-KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIG 152 K+ I E +NE I +L + GLNL N ++ + +WW+ Q I+R+ Sbjct: 843 KKERFKITEYFNESSDIDVLIISLRAGSLGLNLTSANN-VILYDIWWNQSVESQAIDRV- 900 Query: 153 VTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + G KR V V+ LI ++TI+E V + K I D++L Sbjct: 901 ----HRIGQKRGVNVFKLIMKDTIEEKVFELQSQKQKIIDIVLE 940 >gi|118083556|ref|XP_416595.2| PREDICTED: similar to MGC81081 protein [Gallus gallus] Length = 1178 Score = 103 bits (258), Expect = 1e-20, Method: Composition-based stats. Identities = 37/162 (22%), Positives = 63/162 (38%), Gaps = 19/162 (11%) Query: 53 DEKIKALEVIIEKANAAPIIVAYHFNSDLA---------RLQKAFPQGRTLDKDPCTI-- 101 + L+ I + +V + S L L+ + G K + Sbjct: 1010 SHLLAELKTIQSCSETEKSVVVSQWTSMLKVVAVHLQRLGLKYSMLDGSVNPKQRMDVVE 1069 Query: 102 QEWNEGKIP-LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 + N K P ++ + G GLNL GGN L + W+ Q +RI + G Sbjct: 1070 EFNNNPKGPQVMLVSLLAGGVGLNLT-GGNHLFLLDMHWNPALEDQACDRI-----YRVG 1123 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKET 202 K+ V ++ + + T++E +LQ K + +L A K ET Sbjct: 1124 QKKDVVIHRFVCEGTVEEKILQLQTRKKGLAQQVL-AGKGET 1164 >gi|115727572|ref|XP_788696.2| PREDICTED: similar to SWI/SNF-related matrix-associated actin-dependent regulator of chromatin a5 isoform 2 [Strongylocentrotus purpuratus] gi|115939380|ref|XP_001176134.1| PREDICTED: similar to SWI/SNF-related matrix-associated actin-dependent regulator of chromatin a5 isoform 2 [Strongylocentrotus purpuratus] Length = 1019 Score = 103 bits (258), Expect = 1e-20, Method: Composition-based stats. Identities = 44/230 (19%), Positives = 93/230 (40%), Gaps = 42/230 (18%) Query: 2 KQY---HKFQRELYCDLQGENIEAFNSASKTVK---------CLQLANGAVYYD------ 43 K Y QRE Y + ++I+ N A K+ K + N +D Sbjct: 368 KMYVGMSIMQREWYTKILMKDIDVVNGAGKSDKMRLMNILMHLRKCGNHPYLFDGAEPGP 427 Query: 44 ---EEKHWKEVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQ---------KAFP 89 +KH E + K+ L+ ++ K + +++ L L+ Sbjct: 428 PYTTDKHLVE-NSGKMSVLDKLLPKLKEQGSRVLIFSQMTRLLDILEDYCVWRGHNYCRL 486 Query: 90 QGRTLDKDPC-TIQEWN--EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 G+T + +I +N + + + + G G+NL +I+V + W+ + Q Sbjct: 487 DGQTPHAERQESINNFNMPDSEKFVFLLSTRAGGLGINL-ATADIVVLYDSDWNPQVDLQ 545 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 ++R + G K+ V V+ I++NT++E +++R K + ++++ Sbjct: 546 AMDR-----AHRIGQKKQVHVFRFISENTVEERIVERAEMKLRLDNIVIQ 590 >gi|257067534|ref|YP_003153789.1| DNA/RNA helicase, superfamily II, SNF2 family [Brachybacterium faecium DSM 4810] gi|256558352|gb|ACU84199.1| DNA/RNA helicase, superfamily II, SNF2 family [Brachybacterium faecium DSM 4810] Length = 1026 Score = 103 bits (258), Expect = 1e-20, Method: Composition-based stats. Identities = 38/217 (17%), Positives = 77/217 (35%), Gaps = 30/217 (13%) Query: 3 QYHKFQRELYCDLQGENIEAFNSASKT--VKCLQLANG-AVYYDEEKHWK---EVHDEKI 56 Y EL + G + + + + + Q+ N A Y + E K+ Sbjct: 789 LYEAIVEELMTQIDGADEKNRRTLVVSAITRLKQVCNHPAHYLGDGSALVREGEHRSGKL 848 Query: 57 KALEVIIEKA--NAAPIIVAYHFNSDLARL----QKAFPQ-----------GRTLDKDPC 99 + ++ +++ A ++ F + L ++ F + D+D Sbjct: 849 ELVDDLLQTAFEKGHKALLFTQFTTFGHLLVPYWRERFAEFGIDVPFLHGGVSKRDRDQM 908 Query: 100 TIQEWNEGKIP-LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQ 158 + P L+ + G GL L N +V WW+ Q +R + Sbjct: 909 VAEFQQHRDRPGLMLLSLRAGGTGLTLT-AANHVVHLDRWWNPAVENQATDR-----AFR 962 Query: 159 AGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 G +R V V L++ T++E + L+ K + +L + Sbjct: 963 IGQRRDVTVNTLVSAGTVEEKIDTVLQDKQALAELTV 999 >gi|224049311|ref|XP_002191591.1| PREDICTED: SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5 [Taeniopygia guttata] Length = 1093 Score = 103 bits (258), Expect = 1e-20, Method: Composition-based stats. Identities = 42/233 (18%), Positives = 89/233 (38%), Gaps = 40/233 (17%) Query: 1 MKQY---HKFQRELYCDLQGENIEAFNSASKTVK------CLQL--ANGAVYYDEEKHW- 48 +K Y K QRE Y + ++I+ NSA K K +QL Y + Sbjct: 450 VKIYVGLSKMQREWYTRILMKDIDILNSAGKLDKMRLLNILMQLRKCCNHPYLFDGAEPG 509 Query: 49 --------KEVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQ---------KAFP 89 + K+ L+ ++ K + +++ L L+ Sbjct: 510 PPYTTDMHLVTNSGKMVVLDKLLPKLKEQGSRVLIFSQMTRVLDILEDYCMWRNYEYCRL 569 Query: 90 QGRTL-DKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 G+T ++ +I +N+ + + G G+NL ++++ + W+ + Q Sbjct: 570 DGQTPHNERQASINAFNDPDSSKFVFMLSTRAGGLGINL-ATADVVILYDSDWNPQVDLQ 628 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 ++R + G + V V+ I NT++E +++R K + +++ K Sbjct: 629 AMDR-----AHRIGQTKTVRVFRFITDNTVEERIVERAEMKLRLDSIVIQQGK 676 >gi|114631887|ref|XP_001151463.1| PREDICTED: helicase, lymphoid-specific isoform 13 [Pan troglodytes] Length = 779 Score = 103 bits (258), Expect = 1e-20, Method: Composition-based stats. Identities = 25/159 (15%), Positives = 61/159 (38%), Gaps = 19/159 (11%) Query: 50 EVHDEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQK----------AFPQGRTLDKD 97 + K L+ ++ + +++ S L L + + Sbjct: 497 VTNSGKFLILDRMLPELKKRGHKVLLFSQMTSMLDILMDYCHLRDFNFSRLDGSMSYSER 556 Query: 98 PCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 + +N + ++ + + G G+NL + ++ + W+ + Q +R Sbjct: 557 EKNMHSFNTDPEVFIFLVSTRAGGLGINLT-AADTVIIYDSDWNPQSDLQAQDRC----- 610 Query: 157 RQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 + G + V VY L+ NTID+ +++R K ++ L++ Sbjct: 611 HRIGQTKPVVVYRLVTANTIDQKIVERAAAKRKLEKLII 649 >gi|308809077|ref|XP_003081848.1| putative SNF2 domain-containing protein (ISS) [Ostreococcus tauri] gi|116060315|emb|CAL55651.1| putative SNF2 domain-containing protein (ISS) [Ostreococcus tauri] Length = 1782 Score = 103 bits (258), Expect = 1e-20, Method: Composition-based stats. Identities = 38/227 (16%), Positives = 77/227 (33%), Gaps = 40/227 (17%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASK-----------TVKCLQLANGAVYYDEEKHWKE 50 K Y F+ D + + A +L + + K Sbjct: 1485 KMYDSFESS---DAKSAAVSAVEGGGNAEGAAAHVFQTLQYLRKLCSHPKLVSDTTSKKF 1541 Query: 51 VHDE---KIKALEVII---EKANAAPIIVAYHFNSDLARLQKAFPQGRTLD--------- 95 D K A E ++V S L ++ + D Sbjct: 1542 DPDMRSPKFDAGEDAKPNPAAGAGHRVLVFSQLKSLLDLVETELFTTQMRDVSWLRLDGS 1601 Query: 96 ----KDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 + ++++N + I +L G GLNL + +VF W+ ++ Q ++R Sbjct: 1602 VAPSQRFDVVRKFNADPSIDVLLLTTHVGGLGLNLT-SADTVVFLEHDWNPQKDLQAMDR 1660 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + G ++ V VY ++ + T++E ++ R K + + ++NA Sbjct: 1661 -----AHRLGQRKTVNVYRILTRGTLEEKIMSLQRFKLDVANAVVNA 1702 >gi|302809340|ref|XP_002986363.1| hypothetical protein SELMODRAFT_123971 [Selaginella moellendorffii] gi|300145899|gb|EFJ12572.1| hypothetical protein SELMODRAFT_123971 [Selaginella moellendorffii] Length = 585 Score = 103 bits (258), Expect = 1e-20, Method: Composition-based stats. Identities = 36/189 (19%), Positives = 71/189 (37%), Gaps = 22/189 (11%) Query: 19 NIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEV----IIEKANAAPIIVA 74 ++A +S K G++ + + V KI+AL+ +I K +A +V Sbjct: 403 TVDAKSSKVVGKKLTGYRKGSIINRLDLNDF-VTSTKIEALKEEVKKMISKDTSAKGLVF 461 Query: 75 YHFNSDLARLQKAFPQGRT----------LDKDPCTIQEW-NEGKIPLLFAHPASCGHGL 123 F S L + +F L + I + N+ + L + G L Sbjct: 462 SQFTSMLDLIGYSFELAGVKCVKLDGGMSLSQRSTAIDTFRNDPECKLFLMSLKAGGVAL 521 Query: 124 NLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQR 183 NL + + WW+ Q +RI + G + + V + +N+++E +L+ Sbjct: 522 NLTV-ASYIFLMDPWWNPAVEHQAQDRI-----HRIGQYKPIRVTRFVIENSVEERILKL 575 Query: 184 LRTKSTIQD 192 K + + Sbjct: 576 QEKKQLVFE 584 >gi|251770931|gb|EES51516.1| putative helicase, Snf2 family [Leptospirillum ferrodiazotrophum] Length = 1068 Score = 103 bits (258), Expect = 1e-20, Method: Composition-based stats. Identities = 32/160 (20%), Positives = 59/160 (36%), Gaps = 20/160 (12%) Query: 52 HDEKIKALEVIIEK-ANAAPIIVAYHFNSDLARLQKAFP---------QGRT-LDKDPCT 100 + I L+ I E I++ F L ++A P G T + + Sbjct: 891 SSKFILTLDKIAEGVEEGHKILLFSQFTGMLDLFEEALPSRGISTVRLDGSTPISERQKR 950 Query: 101 IQEWNE--GKIP-LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 + + P + + + G GL L + + + WW+ + Q +R Sbjct: 951 VALFQSDAPDSPRVFLSSLKAGGVGLTLTK-ADYVFHYDPWWNPQVEAQASDR-----SH 1004 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + G R+VF+Y + + T++E V + K I LL Sbjct: 1005 RIGQTRSVFIYRFLVRGTVEERVQDLKKVKRDIFSRLLGG 1044 >gi|156379282|ref|XP_001631387.1| predicted protein [Nematostella vectensis] gi|156218426|gb|EDO39324.1| predicted protein [Nematostella vectensis] Length = 1128 Score = 103 bits (258), Expect = 1e-20, Method: Composition-based stats. Identities = 33/167 (19%), Positives = 66/167 (39%), Gaps = 19/167 (11%) Query: 44 EEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAF---------PQGR 92 E + K++ L+ ++ + A +++ L L+K G Sbjct: 734 PEARLIQYDCGKLQTLDNLLRRLKAGKHRVLIFTQMTRMLDVLEKFLNYHGYVYLRLDGS 793 Query: 93 TLDKDPCTI-QEWNEG-KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 T + + +N +I S G G+NL G + +VF+ W+ Q +R Sbjct: 794 TRVEQRQILMDRFNADSRIFCFILSTRSGGLGVNLT-GADTVVFYDSDWNPTMDAQAQDR 852 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + G R V +Y LI++ T++E +L++ K + D+ + Sbjct: 853 C-----HRIGQTRDVHIYRLISERTVEENILKKANQKRMLGDIAIEG 894 >gi|18043584|gb|AAH20056.1| Hells protein [Mus musculus] Length = 275 Score = 103 bits (258), Expect = 1e-20, Method: Composition-based stats. Identities = 28/159 (17%), Positives = 60/159 (37%), Gaps = 19/159 (11%) Query: 50 EVHDEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQK----------AFPQGRTLDKD 97 + K L+ ++ + ++V S L L + + Sbjct: 32 VTNSGKFLILDRMLPELKKRGHKVLVFSQMTSMLDILMDYCHLRNFIFSRLDGSMSYSER 91 Query: 98 PCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 I +N + + L + G G+NL + ++ + W+ + Q +R Sbjct: 92 EKNIYSFNTDPDVFLFLVSTRAGGLGINLT-AADTVIIYDSDWNPQSDLQAQDRC----- 145 Query: 157 RQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 + G + V VY L+ NTID+ +++R K ++ L++ Sbjct: 146 HRIGQTKPVVVYRLVTANTIDQKIVERAAAKRKLEKLII 184 >gi|301788109|ref|XP_002929471.1| PREDICTED: DNA repair and recombination protein RAD54B-like [Ailuropoda melanoleuca] Length = 911 Score = 103 bits (258), Expect = 1e-20, Method: Composition-based stats. Identities = 30/166 (18%), Positives = 64/166 (38%), Gaps = 22/166 (13%) Query: 50 EVHDEKIKALEVIIEKANA----APIIVAYHFNSDLARLQK----------AFPQGRTLD 95 E K++ L ++ + +++ ++ L LQ+ + Sbjct: 639 EEESGKLQVLMKLLAVIHELRPTEKVVLVSNYTQTLNILQEVCKRHGYTYTRLDGQTPIS 698 Query: 96 KDPCTIQEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGV 153 + + +N + + G GLNL GG+ L+ + + W+ Q + R+ Sbjct: 699 QRQQIVDGFNSKYSSDFIFLLSSKAGGVGLNL-IGGSHLILYDIDWNPATDIQAMSRVW- 756 Query: 154 TRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 + G K V +Y L+ TI+E + QR +K + +++ K Sbjct: 757 ----RDGQKHPVHIYRLLTTGTIEEKIYQRQISKQDLSGAVVDLTK 798 >gi|281347253|gb|EFB22837.1| hypothetical protein PANDA_019651 [Ailuropoda melanoleuca] Length = 810 Score = 103 bits (258), Expect = 1e-20, Method: Composition-based stats. Identities = 30/166 (18%), Positives = 64/166 (38%), Gaps = 22/166 (13%) Query: 50 EVHDEKIKALEVIIEKANA----APIIVAYHFNSDLARLQK----------AFPQGRTLD 95 E K++ L ++ + +++ ++ L LQ+ + Sbjct: 538 EEESGKLQVLMKLLAVIHELRPTEKVVLVSNYTQTLNILQEVCKRHGYTYTRLDGQTPIS 597 Query: 96 KDPCTIQEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGV 153 + + +N + + G GLNL GG+ L+ + + W+ Q + R+ Sbjct: 598 QRQQIVDGFNSKYSSDFIFLLSSKAGGVGLNL-IGGSHLILYDIDWNPATDIQAMSRVW- 655 Query: 154 TRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 + G K V +Y L+ TI+E + QR +K + +++ K Sbjct: 656 ----RDGQKHPVHIYRLLTTGTIEEKIYQRQISKQDLSGAVVDLTK 697 >gi|168019895|ref|XP_001762479.1| SWR1 complex protein, SNF2 family DNA-dependent ATPase [Physcomitrella patens subsp. patens] gi|162686212|gb|EDQ72602.1| SWR1 complex protein, SNF2 family DNA-dependent ATPase [Physcomitrella patens subsp. patens] Length = 1780 Score = 103 bits (258), Expect = 1e-20, Method: Composition-based stats. Identities = 35/167 (20%), Positives = 70/167 (41%), Gaps = 19/167 (11%) Query: 44 EEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQ---------KAFPQGR 92 ++ + K++ L V++ + + ++ L L+ G Sbjct: 1036 PDRRLLQFDCGKLQELAVLLRRLKSQGHRALIFTQMTKMLDVLESFINLYGYTYMRLDGS 1095 Query: 93 TLDKDPCTI-QEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 T + + Q +N KI L S G G+NL G + ++F+ W+ Q +R Sbjct: 1096 TKPEQRQVLMQRFNTNPKIFLFILSTRSGGVGINL-VGADTVIFYDSDWNPAMDLQAQDR 1154 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + G R V +Y LI+++TI+E +L++ K + DL++ + Sbjct: 1155 C-----HRIGQTREVHIYRLISESTIEENILKKANQKRILDDLVIQS 1196 >gi|159487869|ref|XP_001701945.1| SNF2 superfamily protein [Chlamydomonas reinhardtii] gi|158281164|gb|EDP06920.1| SNF2 superfamily protein [Chlamydomonas reinhardtii] Length = 3251 Score = 103 bits (258), Expect = 1e-20, Method: Composition-based stats. Identities = 33/165 (20%), Positives = 66/165 (40%), Gaps = 20/165 (12%) Query: 51 VHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQ---------KAFPQGRT-LDKDP 98 + K+K L+ ++ K N + +++ + + L L+ G T +D+ Sbjct: 876 LSSAKVKQLDELLPKLKENGSRVLLFSQWTTVLDLLEWYLSLRGYTYCRLDGSTNVDERL 935 Query: 99 CTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 + +N P + + G GLNL G + ++ + ++ + I+R R Sbjct: 936 KLVDAFNASDSPYFVFLLSTRAGGQGLNLT-GADTVILHDVDFNPQ-----IDRQAEDRA 989 Query: 157 RQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 + G R V VY LI + T+D + K + +L + E Sbjct: 990 HRLGQTRTVTVYRLITRGTVDSNIQAIAERKLALDHAVLGDVAVE 1034 >gi|11994423|dbj|BAB02425.1| helicase-like protein [Arabidopsis thaliana] Length = 2061 Score = 103 bits (258), Expect = 1e-20, Method: Composition-based stats. Identities = 36/166 (21%), Positives = 71/166 (42%), Gaps = 19/166 (11%) Query: 44 EEKHWKEVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQ---------KAFPQGR 92 ++ + K++ L +++ K ++ L L+ G Sbjct: 1071 PDRRLIQFDCGKLQELAMLLRKLKFGGHRALIFTQMTKMLDVLEAFINLYGYTYMRLDGS 1130 Query: 93 TLDKDPCTI-QEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 T ++ T+ Q +N KI L S G G+NL G + ++F+ W+ QQ +R Sbjct: 1131 TPPEERQTLMQRFNTNPKIFLFILSTRSGGVGINL-VGADTVIFYDSDWNPAMDQQAQDR 1189 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + G R V +Y LI+++TI+E +L++ K + +L++ Sbjct: 1190 C-----HRIGQTREVHIYRLISESTIEENILKKANQKRVLDNLVIQ 1230 >gi|221486521|gb|EEE24782.1| DNA repair helicase rad5,16, putative [Toxoplasma gondii GT1] Length = 1667 Score = 103 bits (257), Expect = 1e-20, Method: Composition-based stats. Identities = 35/162 (21%), Positives = 62/162 (38%), Gaps = 22/162 (13%) Query: 52 HDEKIKAL-EVIIE---KANAAPIIVAYHFNSDLARLQKAFPQG-----------RTLDK 96 KI+AL + ++E + +V F S L ++ +G + + Sbjct: 1493 SSTKIEALYQELLEIEREDTTVKSLVFSQFCSMLDLIEWRLKKGGIHCAKMVGSMSIVSR 1552 Query: 97 DPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 N+ + +L + G GLNLQ + + WW+ Q I+R Sbjct: 1553 SNVLYAFNNDPSLKVLLISLKAGGEGLNLQI-ASRIFLMDPWWNPAAEMQAIQR-----A 1606 Query: 157 RQAGFK-RAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + G + + V IA+ TI+E +LQ K + D + A Sbjct: 1607 HRIGQRHKEVIAIRFIAEKTIEERILQLQEKKQLVFDGTVGA 1648 >gi|113955603|ref|YP_731958.1| helicase [Synechococcus sp. CC9311] gi|113882954|gb|ABI47912.1| helicase, Snf2 family protein [Synechococcus sp. CC9311] Length = 1064 Score = 103 bits (257), Expect = 1e-20, Method: Composition-based stats. Identities = 39/216 (18%), Positives = 74/216 (34%), Gaps = 34/216 (15%) Query: 8 QRELYCDLQGENIEAFNSA----------SKTVKCLQLANGAVYYDEEKHWKEVH---DE 54 Q+ LY + ++A A K Q+ N +E+ E Sbjct: 829 QKSLYAKTVEDTLDAIARAPRGKRHGQVLGLLTKLKQICNHPALALKEQGASEDFLKRSV 888 Query: 55 KIKALEVIIEK--ANAAPIIVAYHF----NSDLARLQKA------FPQGRTLDKDPC-TI 101 K++ LE I+++ ++ F LQ+ F G T + + Sbjct: 889 KLQRLEEILDEVVEAGDRALLFTQFAEWGKLLQDYLQRRWRSEVPFLSGSTSKSERQAMV 948 Query: 102 QEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQA 159 + E L + G GLNL + + WW+ Q +R + Sbjct: 949 DRFQEDPRGPQLFLLSLKAGGVGLNLTRASH-VFHIDRWWNPAVENQATDR-----AYRI 1002 Query: 160 GFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 G V V+ I +++E + + +R KS + + ++ Sbjct: 1003 GQTNRVMVHKFITSGSVEEKIDRMIREKSRLAEDII 1038 >gi|298571706|gb|ADI87858.1| hypothetical protein AKSOIL_0350 [uncultured bacterium Ak20-3] Length = 918 Score = 103 bits (257), Expect = 1e-20, Method: Composition-based stats. Identities = 23/176 (13%), Positives = 72/176 (40%), Gaps = 17/176 (9%) Query: 32 CLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQKAFP 89 Q+ N + +W++ K + ++ +A + I++ + + +Q Sbjct: 730 LKQICNHPALIRKTTNWRDGESGKFELFRSLLSEALESNHKIVIYSQYLQMIEIIQNYLK 789 Query: 90 Q---------GRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWD 140 + G++ + + + ++ + + G G++L ++++ + WW+ Sbjct: 790 ELKVGHVVLTGKSQKRGDIVKKFQTDPEVKVFVGSLLAGGLGIDLT-AASVVIHYDRWWN 848 Query: 141 LEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + Q +R+ + G K V L+++ T++E + + + K+++ + L Sbjct: 849 ASKENQATDRV-----HRIGQKNFTQVIKLVSRGTLEEKIDRMIAEKASLFNRFLE 899 >gi|114631883|ref|XP_001151005.1| PREDICTED: helicase, lymphoid-specific isoform 6 [Pan troglodytes] Length = 882 Score = 103 bits (257), Expect = 1e-20, Method: Composition-based stats. Identities = 25/159 (15%), Positives = 61/159 (38%), Gaps = 19/159 (11%) Query: 50 EVHDEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQK----------AFPQGRTLDKD 97 + K L+ ++ + +++ S L L + + Sbjct: 639 VTNSGKFLILDRMLPELKKRGHKVLLFSQMTSMLDILMDYCHLRDFNFSRLDGSMSYSER 698 Query: 98 PCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 + +N + ++ + + G G+NL + ++ + W+ + Q +R Sbjct: 699 EKNMHSFNTDPEVFIFLVSTRAGGLGINLT-AADTVIIYDSDWNPQSDLQAQDRC----- 752 Query: 157 RQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 + G + V VY L+ NTID+ +++R K ++ L++ Sbjct: 753 HRIGQTKPVVVYRLVTANTIDQKIVERAAAKRKLEKLII 791 >gi|70982334|ref|XP_746695.1| SNF2 family helicase/ATPase (Swr1) [Aspergillus fumigatus Af293] gi|74666640|sp|Q4WAS9|SWR1_ASPFU RecName: Full=Helicase swr1 gi|66844319|gb|EAL84657.1| SNF2 family helicase/ATPase (Swr1), putative [Aspergillus fumigatus Af293] gi|159123062|gb|EDP48182.1| SNF2 family helicase/ATPase (Swr1), putative [Aspergillus fumigatus A1163] Length = 1695 Score = 103 bits (257), Expect = 1e-20, Method: Composition-based stats. Identities = 30/166 (18%), Positives = 69/166 (41%), Gaps = 19/166 (11%) Query: 44 EEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAF---------PQGR 92 +K + K++ L+ ++ A ++ L L++ G Sbjct: 1368 PDKRLLQYDCGKLQRLDKLLRDLKAGGHRALIFTQMTKMLDILEQFLNIHGHRYLRLDGT 1427 Query: 93 TLDKDPCTI--QEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 T + + + N+ +I + S G G+NL G + ++F+ L W+ +Q +R Sbjct: 1428 TKVEQRQILTDRFNNDDRILVFILSSRSGGLGINLT-GADTVIFYDLDWNPAMDKQCQDR 1486 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + G R V +Y ++++TI+ +L++ K + D+++ Sbjct: 1487 C-----HRIGQTRDVHIYRFVSEHTIESNILRKANQKRMLDDVVIQ 1527 >gi|145352136|ref|XP_001420413.1| predicted protein [Ostreococcus lucimarinus CCE9901] gi|144580647|gb|ABO98706.1| predicted protein [Ostreococcus lucimarinus CCE9901] Length = 1769 Score = 103 bits (257), Expect = 1e-20, Method: Composition-based stats. Identities = 40/248 (16%), Positives = 87/248 (35%), Gaps = 61/248 (24%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSA-----------SKTVKCLQLANGAVYYDEEKHWKE 50 K Y F+ + + + + A + +L + + K+ Sbjct: 1451 KMYDAFESS---EAKDQAVSAIEGGGGAEGAAQHVFTTLQYLRKLCSHPKLVVSDGASKK 1507 Query: 51 VH----DEKIKALEVII-----------EKANA------------APIIVAYHFNSDLAR 83 + K AL+ I+ EK+N ++V S L Sbjct: 1508 FNPEMRSPKFDALKQILIDCGIGVDLEEEKSNGDEGKPNPASGAGHRVLVFSQLKSLLDL 1567 Query: 84 LQKAFPQGRTLD-------------KDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGG 129 ++ + D + ++++N + I +L G GLNL Sbjct: 1568 VENELFTTQMRDVSWLRLDGSIPPSQRFDVVRKFNADPSIDVLLLTTHVGGLGLNLT-SA 1626 Query: 130 NILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKST 189 + +VF W+ ++ Q ++R + G ++ V VY ++ + T++E ++ R K Sbjct: 1627 DTVVFLEHDWNPQKDLQAMDR-----AHRLGQRKTVNVYRILTRGTLEEKIMSLQRFKLD 1681 Query: 190 IQDLLLNA 197 + + ++NA Sbjct: 1682 VANAVVNA 1689 >gi|145595877|ref|YP_001160174.1| non-specific serine/threonine protein kinase [Salinispora tropica CNB-440] gi|145305214|gb|ABP55796.1| Non-specific serine/threonine protein kinase [Salinispora tropica CNB-440] Length = 1050 Score = 103 bits (257), Expect = 1e-20, Method: Composition-based stats. Identities = 32/212 (15%), Positives = 64/212 (30%), Gaps = 22/212 (10%) Query: 2 KQYHKFQRELYCDLQGEN-IEAFN-SASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKAL 59 Y ++ ++ IE + + Q+ N + + K+ L Sbjct: 819 ALYRAVVDDMMAQIESSEGIERRGLVLAAMTRLKQVCNHPAHLLRDNSALVGRSGKLARL 878 Query: 60 EVIIEKA--NAAPIIVAYHFNSDLARLQKAFP-----------QGRTLDKDPCTIQEWNE 106 E I+++ ++ + L+ G + + Sbjct: 879 EEILDEVLVAGEKALLFTQYAEFGGMLRGHLSARFGQETLFLHGGVGKADRDAMVTRFQS 938 Query: 107 GKIP-LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 P L + G GL L N +V WW+ Q +R + G +R V Sbjct: 939 PDGPALFVLSLKAGGTGLTLT-AANHVVHVDRWWNPAVEDQATDR-----AFRIGQRRRV 992 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 V + T++E V + K + ++ A Sbjct: 993 QVRKFVCAGTVEEKVAALIADKRRLASTVVGA 1024 >gi|302814039|ref|XP_002988704.1| hypothetical protein SELMODRAFT_128555 [Selaginella moellendorffii] gi|300143525|gb|EFJ10215.1| hypothetical protein SELMODRAFT_128555 [Selaginella moellendorffii] Length = 669 Score = 103 bits (257), Expect = 1e-20, Method: Composition-based stats. Identities = 36/189 (19%), Positives = 71/189 (37%), Gaps = 22/189 (11%) Query: 19 NIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEV----IIEKANAAPIIVA 74 ++A +S K G++ + + V KI+AL+ +I K +A +V Sbjct: 487 TVDAKSSKVVGKKLTGYRKGSIINRLDLNDF-VTSTKIEALKEEVKKMISKDTSAKGLVF 545 Query: 75 YHFNSDLARLQKAFPQGRT----------LDKDPCTIQEW-NEGKIPLLFAHPASCGHGL 123 F S L + +F L + I + N+ + L + G L Sbjct: 546 SQFTSMLDLIGYSFELAGVKCVKLDGGMSLSQRSTAIDTFRNDPECKLFLMSLKAGGVAL 605 Query: 124 NLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQR 183 NL + + WW+ Q +RI + G + + V + +N+++E +L+ Sbjct: 606 NLTV-ASYIFLMDPWWNPAVEHQAQDRI-----HRIGQYKPIRVTRFVIENSVEERILKL 659 Query: 184 LRTKSTIQD 192 K + + Sbjct: 660 QEKKQLVFE 668 >gi|302656074|ref|XP_003019794.1| hypothetical protein TRV_06171 [Trichophyton verrucosum HKI 0517] gi|291183564|gb|EFE39170.1| hypothetical protein TRV_06171 [Trichophyton verrucosum HKI 0517] Length = 881 Score = 103 bits (257), Expect = 1e-20, Method: Composition-based stats. Identities = 28/146 (19%), Positives = 55/146 (37%), Gaps = 18/146 (12%) Query: 66 ANAAPIIVAYHFNSDLARLQKAFPQGR------------TLDKDPCTIQEWNEGKIPLLF 113 + I++ F L L+ Q R D+ N+ + Sbjct: 651 SKGHKILIFSQFKGQLDILEDWATQLRSWNCCRIDGAIAQADRQEQINAFNNDPDYRIFL 710 Query: 114 AHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQ 173 + G G+NL + ++ F W+ ++ Q R + G + V VY L + Sbjct: 711 LSTRAGGQGINLT-AADTVILFDSDWNPQQDLQA-----QDRAHRIGQTKPVIVYRLATR 764 Query: 174 NTIDELVLQRLRTKSTIQDLLLNALK 199 TI++ +L+R +K ++ L++ K Sbjct: 765 GTIEQTLLERAGSKRRLEKLVIQKGK 790 >gi|114631891|ref|XP_001150939.1| PREDICTED: helicase, lymphoid-specific isoform 5 [Pan troglodytes] Length = 708 Score = 103 bits (257), Expect = 1e-20, Method: Composition-based stats. Identities = 25/159 (15%), Positives = 61/159 (38%), Gaps = 19/159 (11%) Query: 50 EVHDEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQK----------AFPQGRTLDKD 97 + K L+ ++ + +++ S L L + + Sbjct: 465 VTNSGKFLILDRMLPELKKRGHKVLLFSQMTSMLDILMDYCHLRDFNFSRLDGSMSYSER 524 Query: 98 PCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 + +N + ++ + + G G+NL + ++ + W+ + Q +R Sbjct: 525 EKNMHSFNTDPEVFIFLVSTRAGGLGINLT-AADTVIIYDSDWNPQSDLQAQDRC----- 578 Query: 157 RQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 + G + V VY L+ NTID+ +++R K ++ L++ Sbjct: 579 HRIGQTKPVVVYRLVTANTIDQKIVERAAAKRKLEKLII 617 >gi|42564102|ref|NP_187887.3| PIE1 (PHOTOPERIOD-INDEPENDENT EARLY FLOWERING 1); ATP binding / DNA binding / helicase/ nucleic acid binding [Arabidopsis thaliana] gi|30984019|gb|AAP40633.1| photoperiod independent early flowering1 [Arabidopsis thaliana] Length = 2055 Score = 103 bits (257), Expect = 1e-20, Method: Composition-based stats. Identities = 36/166 (21%), Positives = 71/166 (42%), Gaps = 19/166 (11%) Query: 44 EEKHWKEVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQ---------KAFPQGR 92 ++ + K++ L +++ K ++ L L+ G Sbjct: 1065 PDRRLIQFDCGKLQELAMLLRKLKFGGHRALIFTQMTKMLDVLEAFINLYGYTYMRLDGS 1124 Query: 93 TLDKDPCTI-QEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 T ++ T+ Q +N KI L S G G+NL G + ++F+ W+ QQ +R Sbjct: 1125 TPPEERQTLMQRFNTNPKIFLFILSTRSGGVGINL-VGADTVIFYDSDWNPAMDQQAQDR 1183 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + G R V +Y LI+++TI+E +L++ K + +L++ Sbjct: 1184 C-----HRIGQTREVHIYRLISESTIEENILKKANQKRVLDNLVIQ 1224 >gi|74008357|ref|XP_865363.1| PREDICTED: similar to SWI/SNF-related matrix-associated actin-dependent regulator of chromatin a1 isoform b isoform 7 [Canis familiaris] Length = 1033 Score = 103 bits (257), Expect = 1e-20, Method: Composition-based stats. Identities = 44/242 (18%), Positives = 90/242 (37%), Gaps = 52/242 (21%) Query: 1 MKQY---HKFQRELYCDLQGENIEAFNSASKTVK------CLQL---ANGAVYYD----- 43 +K Y K QRE Y + ++I+ NSA K K +QL N +D Sbjct: 392 IKVYLGLSKMQREWYTKILMKDIDVLNSAGKMDKMRLLNILMQLRKCCNHPYLFDGAEPG 451 Query: 44 ---EEKHWKEVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQ---------KAFP 89 + K+ L+ ++ K + +++ L L+ Sbjct: 452 PPYTTDEHIVSNSGKMVVLDKLLAKLKEQGSRVLIFSQMTRLLDILEDYCMWRGYEYCRL 511 Query: 90 QGRTLDKDPCT-------------IQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVF 134 G+T ++ I+ +N + + G G+NL ++++ Sbjct: 512 DGQTPHEEREDKFLEVELLGQREAIEAFNAPNSSKFIFMLSTRAGGLGINL-ASADVVIL 570 Query: 135 FSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 + W+ + Q ++R + G K+ V V+ LI NT++E +++R K + ++ Sbjct: 571 YDSDWNPQVDLQAMDR-----AHRIGQKKPVRVFRLITDNTVEERIVERAEIKLRLDSIV 625 Query: 195 LN 196 + Sbjct: 626 IQ 627 >gi|15220993|ref|NP_172004.1| SNF2 domain-containing protein / helicase domain-containing protein / RING finger domain-containing protein [Arabidopsis thaliana] gi|332189671|gb|AEE27792.1| Helicase protein with RING/U-box domain [Arabidopsis thaliana] Length = 833 Score = 103 bits (257), Expect = 1e-20, Method: Composition-based stats. Identities = 30/156 (19%), Positives = 59/156 (37%), Gaps = 21/156 (13%) Query: 52 HDEKIKALEV----IIEKANAAPIIVAYHFNSDLARLQKAFPQ----------GRTLDKD 97 KI+AL ++E+ +A IV F S L + + T+ Sbjct: 660 TSTKIEALREEIRFMVERDGSAKAIVFSQFTSFLDLINYTLGKCGVSCVQLVGSMTMAAR 719 Query: 98 PCTIQEW-NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 I ++ + + + G LNL ++ + WW+ +ER R Sbjct: 720 DTAINKFKEDPDCRVFLMSLKAGGVALNLTVASHVFMM-DPWWN-----PAVERQAQDRI 773 Query: 157 RQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQD 192 + G + + V I +NT++E +L+ + K + + Sbjct: 774 HRIGQYKPIRVVRFIIENTVEERILRLQKKKELVFE 809 >gi|42407261|dbj|BAD10847.1| lymphoid specific helicase variant4 [Homo sapiens] gi|119570421|gb|EAW50036.1| helicase, lymphoid-specific, isoform CRA_k [Homo sapiens] Length = 708 Score = 103 bits (257), Expect = 1e-20, Method: Composition-based stats. Identities = 25/159 (15%), Positives = 61/159 (38%), Gaps = 19/159 (11%) Query: 50 EVHDEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQK----------AFPQGRTLDKD 97 + K L+ ++ + +++ S L L + + Sbjct: 465 VTNSGKFLILDRMLPELKKRGHKVLLFSQMTSMLDILMDYCHLRDFNFSRLDGSMSYSER 524 Query: 98 PCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 + +N + ++ + + G G+NL + ++ + W+ + Q +R Sbjct: 525 EKNMHSFNTDPEVFIFLVSTRAGGLGINLT-AADTVIIYDSDWNPQSDLQAQDRC----- 578 Query: 157 RQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 + G + V VY L+ NTID+ +++R K ++ L++ Sbjct: 579 HRIGQTKPVVVYRLVTANTIDQKIVERAAAKRKLEKLII 617 >gi|290997882|ref|XP_002681510.1| TATA-binding protein-associated factor 172 [Naegleria gruberi] gi|284095134|gb|EFC48766.1| TATA-binding protein-associated factor 172 [Naegleria gruberi] Length = 1788 Score = 103 bits (257), Expect = 1e-20, Method: Composition-based stats. Identities = 39/208 (18%), Positives = 74/208 (35%), Gaps = 37/208 (17%) Query: 3 QYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVI 62 Y +E+ QG ++ N + K + QL N Sbjct: 1530 MYESVTQEI--KQQGLDVRDVNLSPKLLSLKQLLNDCGIGAGNSD--------------- 1572 Query: 63 IEKANAAPIIVAYHFNSDLARLQK-------------AFPQGRTLDKDPCTIQEWN-EGK 108 ++ +N +++ L +Q K + ++N + Sbjct: 1573 VDSSNQHRVLIFCQLKQMLDIIQNELFAKYMPNVTFMRLDGDVETTKRYEIVTKFNSDPT 1632 Query: 109 IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVY 168 I +L G GLNL G + ++F W+ Q ++R + G K+ V VY Sbjct: 1633 IDVLLLTTKIGGLGLNLT-GADTVIFVEHDWNPSADLQAMDR-----AHRIGQKKVVNVY 1686 Query: 169 YLIAQNTIDELVLQRLRTKSTIQDLLLN 196 LI +NT++E ++ + K+ I ++N Sbjct: 1687 RLITRNTLEEKIMGLQKFKTNISKSVIN 1714 >gi|325661424|ref|ZP_08150050.1| hypothetical protein HMPREF0490_00784 [Lachnospiraceae bacterium 4_1_37FAA] gi|325472373|gb|EGC75585.1| hypothetical protein HMPREF0490_00784 [Lachnospiraceae bacterium 4_1_37FAA] Length = 493 Score = 103 bits (257), Expect = 1e-20, Method: Composition-based stats. Identities = 45/197 (22%), Positives = 79/197 (40%), Gaps = 14/197 (7%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEV 61 K Y+ ++ + F +K +K ++ +G V + + K LE Sbjct: 299 KYYNDILNDIKEHI--NEWSKFEFTAKLMKLREVVSGFV-IQKNGDVTDFKTNKDNILED 355 Query: 62 IIEKANAAPIIVAYHFNSDLARLQKAFP----QGRTLDKDPCTIQEWNEGKIPLLFAHPA 117 + + +IV F ++ +L + F +T ++D I+ + G I LLFAHP Sbjct: 356 TLNEIGDKQVIVWCQFIHEIEKLAEKFDGTALTSKTKNRD-DIIRSFKNGDIKLLFAHPK 414 Query: 118 SCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 G G +++SL + EE +Q +RI + G L +NTID Sbjct: 415 LLGKGATFTN-CTYNIYYSLSFSYEEFKQSQDRI-----HRIGQANKCTYIILQGKNTID 468 Query: 178 ELVLQRLRTKSTIQDLL 194 + + L+ K D L Sbjct: 469 KRIYNSLQRKGNAVDEL 485 >gi|302794729|ref|XP_002979128.1| hypothetical protein SELMODRAFT_110695 [Selaginella moellendorffii] gi|300152896|gb|EFJ19536.1| hypothetical protein SELMODRAFT_110695 [Selaginella moellendorffii] Length = 851 Score = 103 bits (257), Expect = 1e-20, Method: Composition-based stats. Identities = 34/155 (21%), Positives = 60/155 (38%), Gaps = 23/155 (14%) Query: 52 HDEKIKALEVIIEKANAA----PIIVAYHFNSDLARLQKAFPQGRTL----------DKD 97 KI AL ++EK A +V F++ L ++ + K Sbjct: 675 PSAKINALISMLEKTRAKDPNIKSVVFSQFSTMLKLIEGPLQKAGFKFVKLEGGMSASKR 734 Query: 98 PCTIQEW---NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 ++ + G + + G GLNL N+ + WW+ +Q ++R+ Sbjct: 735 EENMEAFKSTRSGSPTVFLLSLKAAGVGLNLVTASNVFMM-DPWWNPAVEEQAMDRV--- 790 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKST 189 + G R V V+ LIA ++I+E +LQ K Sbjct: 791 --HRLGQTRDVHVFRLIATDSIEERLLQVQEKKRA 823 >gi|74008359|ref|XP_538168.2| PREDICTED: similar to SWI/SNF-related matrix-associated actin-dependent regulator of chromatin a1 isoform a isoform 1 [Canis familiaris] Length = 1054 Score = 103 bits (257), Expect = 1e-20, Method: Composition-based stats. Identities = 44/242 (18%), Positives = 90/242 (37%), Gaps = 52/242 (21%) Query: 1 MKQY---HKFQRELYCDLQGENIEAFNSASKTVK------CLQL---ANGAVYYD----- 43 +K Y K QRE Y + ++I+ NSA K K +QL N +D Sbjct: 413 IKVYLGLSKMQREWYTKILMKDIDVLNSAGKMDKMRLLNILMQLRKCCNHPYLFDGAEPG 472 Query: 44 ---EEKHWKEVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQ---------KAFP 89 + K+ L+ ++ K + +++ L L+ Sbjct: 473 PPYTTDEHIVSNSGKMVVLDKLLAKLKEQGSRVLIFSQMTRLLDILEDYCMWRGYEYCRL 532 Query: 90 QGRTLDKDPCT-------------IQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVF 134 G+T ++ I+ +N + + G G+NL ++++ Sbjct: 533 DGQTPHEEREDKFLEVELLGQREAIEAFNAPNSSKFIFMLSTRAGGLGINL-ASADVVIL 591 Query: 135 FSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 + W+ + Q ++R + G K+ V V+ LI NT++E +++R K + ++ Sbjct: 592 YDSDWNPQVDLQAMDR-----AHRIGQKKPVRVFRLITDNTVEERIVERAEIKLRLDSIV 646 Query: 195 LN 196 + Sbjct: 647 IQ 648 >gi|114631873|ref|XP_001151526.1| PREDICTED: helicase, lymphoid-specific isoform 14 [Pan troglodytes] Length = 923 Score = 103 bits (257), Expect = 1e-20, Method: Composition-based stats. Identities = 25/159 (15%), Positives = 61/159 (38%), Gaps = 19/159 (11%) Query: 50 EVHDEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQK----------AFPQGRTLDKD 97 + K L+ ++ + +++ S L L + + Sbjct: 641 VTNSGKFLILDRMLPELKKRGHKVLLFSQMTSMLDILMDYCHLRDFNFSRLDGSMSYSER 700 Query: 98 PCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 + +N + ++ + + G G+NL + ++ + W+ + Q +R Sbjct: 701 EKNMHSFNTDPEVFIFLVSTRAGGLGINLT-AADTVIIYDSDWNPQSDLQAQDRC----- 754 Query: 157 RQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 + G + V VY L+ NTID+ +++R K ++ L++ Sbjct: 755 HRIGQTKPVVVYRLVTANTIDQKIVERAAAKRKLEKLII 793 >gi|324507205|gb|ADY43057.1| DNA repair and recombination protein RAD54-like protein [Ascaris suum] Length = 755 Score = 103 bits (257), Expect = 1e-20, Method: Composition-based stats. Identities = 35/169 (20%), Positives = 70/169 (41%), Gaps = 23/169 (13%) Query: 44 EEKHWKEVHDEKIKALEVII----EKANAAPIIVAYHFNSDLA---RLQK-------AFP 89 +K ++ K+K L+ ++ + N ++V ++ + L K Sbjct: 498 SDKTFEPAFSGKMKVLDYLLAVTKQTTNDKFVLV-SNYTQTIDSFVELCKLRRYGYVRLD 556 Query: 90 QGRTLDKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQM 147 ++ + ++++N+ + + G GLNL G N LV F W+ Q Sbjct: 557 GSSSIKQRAKIVEKFNDPTSSEYVFLLSSKAGGCGLNL-IGANRLVMFDPDWNPANDDQA 615 Query: 148 IERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + RI + G K+ F+Y L+A TI+E + QR K + +++ Sbjct: 616 MARIW-----RDGQKKHCFIYRLLATGTIEEKMFQRQTHKKALSSCVVD 659 >gi|255082185|ref|XP_002508311.1| SNF2 super family [Micromonas sp. RCC299] gi|226523587|gb|ACO69569.1| SNF2 super family [Micromonas sp. RCC299] Length = 1126 Score = 103 bits (257), Expect = 1e-20, Method: Composition-based stats. Identities = 31/153 (20%), Positives = 63/153 (41%), Gaps = 18/153 (11%) Query: 54 EKIKALEVIIEKANAAPIIVAYHFNSDLARLQK----------AFPQGRTLDKDPCTIQE 103 + L I+ K +++ ++ L +Q ++ K ++ Sbjct: 542 AVLARLLAILRKETKDRVVIISNYTQTLDLIQTLCRNNRYPFCRLDGSTSISKRQKLVKR 601 Query: 104 WNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGF 161 +N+ + + G G+NL GGN LV F W+ +Q R + G Sbjct: 602 FNDPAEDCFVFLLSSKAGGCGINL-IGGNRLVLFDPDWNPANDKQAAARCW-----RDGQ 655 Query: 162 KRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 K+ ++Y +A +I+E V QR +K ++Q+++ Sbjct: 656 KKKCYLYRFLATGSIEEKVFQRQLSKESLQNVV 688 >gi|73998080|ref|XP_859428.1| PREDICTED: similar to helicase, lymphoid-specific isoform 8 [Canis familiaris] Length = 805 Score = 103 bits (257), Expect = 1e-20, Method: Composition-based stats. Identities = 25/149 (16%), Positives = 56/149 (37%), Gaps = 19/149 (12%) Query: 58 ALEVIIEKANAAPIIVAYHFNSDLARLQK----------AFPQGRTLDKDPCTIQEWN-E 106 L + KA +++ L L + + + +N + Sbjct: 574 MLPEL--KARGHKVLLFSQMTRMLDILMDYCHFRNFNFSRLDGSMSYSEREKNMHSFNTD 631 Query: 107 GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVF 166 + + + G G+NL + ++ + W+ + Q +R + G + V Sbjct: 632 PDVFIFLVSTRAGGLGINLT-AADTVIIYDSDWNPQSDLQAQDRC-----HRIGQTKPVV 685 Query: 167 VYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 VY L+ NTID+ +++R K ++ L++ Sbjct: 686 VYRLVTANTIDQKIVERAAAKRKLEKLII 714 >gi|317129655|ref|YP_004095937.1| SNF2-related protein [Bacillus cellulosilyticus DSM 2522] gi|315474603|gb|ADU31206.1| SNF2-related protein [Bacillus cellulosilyticus DSM 2522] Length = 942 Score = 103 bits (257), Expect = 2e-20, Method: Composition-based stats. Identities = 41/213 (19%), Positives = 79/213 (37%), Gaps = 24/213 (11%) Query: 3 QYHKFQRELYCDLQGEN-IEAFNSA-SKTVKCLQLANGAVYYDEEKHWK--EVHDEKIKA 58 Y EL DL + +E + + Q+ N ++ +E + + K Sbjct: 716 LYEAVVEELLEDLPSYSMLEKRSRLFQAITQLKQICNHPAHFTKESNIANMKGRSNKWDT 775 Query: 59 LEVII--EKANAAPIIVAYHFNSDLARLQKAFP------------QGRTLDKDPCTIQEW 104 ++ + A ++ + LQKA Q D+ Sbjct: 776 CMSLLAHNQVEAKQTLLFTQYRYIGNLLQKAIAKELNTTVPFFHGQLSMKDRQNMITSFQ 835 Query: 105 NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA 164 E + P++ + G GLNL + ++ + WW+ Q +R+ + G KR Sbjct: 836 AERRYPVMIISLRAGGFGLNLTN-ASEVIHYDRWWNPAVEDQATDRV-----YRIGQKRD 889 Query: 165 VFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 V V+ I++ TI++ + L+ K +Q LL + Sbjct: 890 VTVHTFISEGTIEQKLDNLLQEKKALQQSLLQS 922 >gi|66811390|ref|XP_639875.1| SNF2-related domain-containing protein [Dictyostelium discoideum AX4] gi|60466825|gb|EAL64871.1| SNF2-related domain-containing protein [Dictyostelium discoideum AX4] Length = 989 Score = 103 bits (257), Expect = 2e-20, Method: Composition-based stats. Identities = 38/169 (22%), Positives = 67/169 (39%), Gaps = 32/169 (18%) Query: 53 DEKIKALEVIIEK---ANAAPIIVAYHFNSDL---ARLQKAFPQGRTL-------DKDPC 99 K+ +E +I++ N ++V +F L RL K D Sbjct: 629 SGKLLFVESLIKQLKPMNEKLVLV-SNFTKTLDVFERLCKRLSIDTLRLDGDVKADSRQA 687 Query: 100 TIQEWNEG------------KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQM 147 + ++N + + + G G+NL GGN LV + W+ Q Sbjct: 688 LVDKFNSSTQNVSSSKSSSSQYQVFLLSAKAGGVGINL-IGGNHLVLYDPDWNPAIDIQA 746 Query: 148 IERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 +ERI + G + VF+Y L + TI+E + QR K +I + +++ Sbjct: 747 MERIW-----REGQTKPVFIYRLFSTGTIEEKIYQRQLMKESISNSIVD 790 >gi|324998496|ref|ZP_08119608.1| helicase [Pseudonocardia sp. P1] Length = 595 Score = 103 bits (257), Expect = 2e-20, Method: Composition-based stats. Identities = 40/204 (19%), Positives = 71/204 (34%), Gaps = 20/204 (9%) Query: 15 LQGENIEAFNSASKTVKCLQLANGAVYYDEEK----HWKEVHDEKIKALEVIIEKANAAP 70 L + + + + Q+ E D + + I++ AA Sbjct: 380 LGSGSARRGHVLALLTRLKQICVHPALAGAEDLEYSGRSASFDRLTELVTEIVDNDEAAL 439 Query: 71 IIVAYHFNSDL------ARLQKAFP---QGRTLDKDPCTIQEWNEGK-IPLLFAHPASCG 120 + Y DL RL A P G + + E++ G P+L + G Sbjct: 440 VFTQYRTAGDLLVSRLSDRLGMAVPFLHGGLSRPARERLVAEFSGGAGPPVLILSLRAAG 499 Query: 121 HGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELV 180 GL L ++L WW+ Q +R + G R V V+ + T++EL+ Sbjct: 500 TGLTLTRATHVL-HLDRWWNPAVEAQASDR-----AHRIGQTRPVTVHTFTTRGTVEELI 553 Query: 181 LQRLRTKSTIQDLLLNALKKETIH 204 + R K+ + D L + T+ Sbjct: 554 AELHRGKAGLADAALGQAEASTVG 577 >gi|224128974|ref|XP_002320469.1| chromatin remodeling complex subunit [Populus trichocarpa] gi|222861242|gb|EEE98784.1| chromatin remodeling complex subunit [Populus trichocarpa] Length = 265 Score = 103 bits (257), Expect = 2e-20, Method: Composition-based stats. Identities = 29/161 (18%), Positives = 57/161 (35%), Gaps = 21/161 (13%) Query: 52 HDEKIKALEV----IIEKANAAPIIVAYHFNSDLARLQKAFPQGRT----------LDKD 97 KI+AL + E+ +A IV F S L + + + L Sbjct: 92 TSTKIEALREEIRFMAERDGSAKGIVFSQFTSFLDLIHYSLQKSGISCVQLVGSMSLAAR 151 Query: 98 PCTIQEW-NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 I+ + + + + G LNL + + WW+ +ER R Sbjct: 152 DAAIKRFAEDPDCKIFLMSLKAGGVALNLTVASH-VFLMDPWWN-----PAVERQAQDRI 205 Query: 157 RQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + G + + + + +NT++E +LQ K + + + Sbjct: 206 HRIGQYKPIRIVRFVIENTVEERILQLQEKKELVFEGTVGG 246 >gi|302683608|ref|XP_003031485.1| hypothetical protein SCHCODRAFT_77313 [Schizophyllum commune H4-8] gi|300105177|gb|EFI96582.1| hypothetical protein SCHCODRAFT_77313 [Schizophyllum commune H4-8] Length = 634 Score = 103 bits (257), Expect = 2e-20, Method: Composition-based stats. Identities = 35/212 (16%), Positives = 75/212 (35%), Gaps = 41/212 (19%) Query: 5 HKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIE 64 +F R+ L+ ++ +S++K K +++ L+ I + Sbjct: 430 DRFCRD-CAMLKAMRVDGMSSSAKLRKIMEI-----------------------LDEIED 465 Query: 65 KANAAPIIVAYHFNSDLARLQKAFPQGRTL-----DKDPCTIQEW------NEGKIPLLF 113 + IV F S L ++ + K ++E I ++ Sbjct: 466 RGEGEKTIVFSQFTSMLDLIEPFLKKRGVRFVRYDGKMRADMREHSLKQIRENESIKVIL 525 Query: 114 AHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQ 173 + GLNL N ++ +WW+ Q +R + G +R V +Y L Sbjct: 526 ISFKAGSTGLNLT-ACNNVILVDMWWNPALEDQAFDR-----AHRFGQQRPVNIYKLKID 579 Query: 174 NTIDELVLQRLRTKSTIQDLLLNALKKETIHV 205 +T+++ +L K + L+ K + + + Sbjct: 580 DTVEDRILALQEKKRELTKAALSGEKVKNLRL 611 >gi|302500427|ref|XP_003012207.1| hypothetical protein ARB_01467 [Arthroderma benhamiae CBS 112371] gi|291175764|gb|EFE31567.1| hypothetical protein ARB_01467 [Arthroderma benhamiae CBS 112371] Length = 881 Score = 103 bits (257), Expect = 2e-20, Method: Composition-based stats. Identities = 28/146 (19%), Positives = 55/146 (37%), Gaps = 18/146 (12%) Query: 66 ANAAPIIVAYHFNSDLARLQKAFPQGR------------TLDKDPCTIQEWNEGKIPLLF 113 + I++ F L L+ Q R D+ N+ + Sbjct: 651 SKGHKILIFSQFKGQLDILEDWATQLRSWNCCRIDGAIAQADRQEQINSFNNDPDYRIFL 710 Query: 114 AHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQ 173 + G G+NL + ++ F W+ ++ Q R + G + V VY L + Sbjct: 711 LSTRAGGQGINLT-AADTVILFDSDWNPQQDLQA-----QDRAHRIGQTKPVIVYRLATR 764 Query: 174 NTIDELVLQRLRTKSTIQDLLLNALK 199 TI++ +L+R +K ++ L++ K Sbjct: 765 GTIEQTLLERAGSKRRLEKLVIQKGK 790 >gi|255567695|ref|XP_002524826.1| DNA repair helicase rad5,16, putative [Ricinus communis] gi|223535886|gb|EEF37546.1| DNA repair helicase rad5,16, putative [Ricinus communis] Length = 874 Score = 103 bits (257), Expect = 2e-20, Method: Composition-based stats. Identities = 31/161 (19%), Positives = 58/161 (36%), Gaps = 21/161 (13%) Query: 52 HDEKIKALEV----IIEKANAAPIIVAYHFNSDLARLQKAFPQGRT----------LDKD 97 KI+AL ++E+ +A IV F S L + + + L Sbjct: 701 TSTKIEALREEIRFMVERDGSAKGIVFSQFTSFLDLISYSLHKSGINCVQLVGSMSLPAR 760 Query: 98 PCTIQEW-NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 I+ + + + + G LNL + + WW+ +ER R Sbjct: 761 DNAIKRFSEDPNCKIFLMSLKAGGVALNLTVASH-VFLMDPWWN-----PAVERQAQDRI 814 Query: 157 RQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + G + + + + +NTI+E +LQ K + + L Sbjct: 815 HRIGQYKPIRIVRFVIENTIEERILQLQEKKELVFEGTLGG 855 >gi|222629381|gb|EEE61513.1| hypothetical protein OsJ_15806 [Oryza sativa Japonica Group] Length = 934 Score = 103 bits (257), Expect = 2e-20, Method: Composition-based stats. Identities = 25/162 (15%), Positives = 65/162 (40%), Gaps = 19/162 (11%) Query: 49 KEVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQ----------KAFPQGRTLDK 96 + K +AL ++ + +++ + + L L+ + G + + Sbjct: 708 HVLGSAKCQALAELLPSLANDGHRVLIFSQWTTMLDILEWTLEVIGVTYRRLDGGTPVTE 767 Query: 97 DPCTIQEWNEGK-IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTR 155 + +N + I + G GLNL G + ++ + ++ + +Q +R Sbjct: 768 RQTIVDTFNNDRSIFACLLSTRAGGQGLNL-IGADTVIIHDMDFNPQMDRQAEDRC---- 822 Query: 156 QRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + G ++ V +Y L+ + ++DE + + R K + +L + Sbjct: 823 -HRIGQQKPVTIYRLVTKGSVDENIYEIARRKLVLDAAILQS 863 >gi|114631889|ref|XP_001151071.1| PREDICTED: helicase, lymphoid-specific isoform 7 [Pan troglodytes] Length = 740 Score = 103 bits (257), Expect = 2e-20, Method: Composition-based stats. Identities = 25/159 (15%), Positives = 61/159 (38%), Gaps = 19/159 (11%) Query: 50 EVHDEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQK----------AFPQGRTLDKD 97 + K L+ ++ + +++ S L L + + Sbjct: 497 VTNSGKFLILDRMLPELKKRGHKVLLFSQMTSMLDILMDYCHLRDFNFSRLDGSMSYSER 556 Query: 98 PCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 + +N + ++ + + G G+NL + ++ + W+ + Q +R Sbjct: 557 EKNMHSFNTDPEVFIFLVSTRAGGLGINLT-AADTVIIYDSDWNPQSDLQAQDRC----- 610 Query: 157 RQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 + G + V VY L+ NTID+ +++R K ++ L++ Sbjct: 611 HRIGQTKPVVVYRLVTANTIDQKIVERAAAKRKLEKLII 649 >gi|313233227|emb|CBY24342.1| unnamed protein product [Oikopleura dioica] Length = 1202 Score = 103 bits (257), Expect = 2e-20, Method: Composition-based stats. Identities = 46/231 (19%), Positives = 83/231 (35%), Gaps = 39/231 (16%) Query: 4 YHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAV----------------YYDEEKH 47 Y KF +E L E ++ +S +L N YY + K Sbjct: 429 YIKFVKEKKRLLDTEGMQGPSSLQAITALKKLCNHPALVYPLINNPEYKFLQPYYKDFKP 488 Query: 48 WKEVH--DEK---IKALEVIIEKANAAPIIVAYHFNSDLARLQK----------AFPQGR 92 K K + + I + ++ ++ L Q+ Sbjct: 489 DKFDPTLSGKFLLLDLILAITKMHTDDKFVLVSNYTQTLDTCQELCKLRGYGYVRLDGTM 548 Query: 93 TLDKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 + K + E+N + + + G GLNL G N L+ F W+ Q + R Sbjct: 549 AIKKRSKLVAEFNSPESSDYVFMLSSKAGGCGLNL-IGANRLIMFDPDWNPANDDQAMAR 607 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 + + G K+ F+Y L+A TI+E +LQR K + ++++A + + Sbjct: 608 VW-----RDGQKKRCFIYRLVAAGTIEEKMLQRQLHKKALSGVVVDAQEAD 653 >gi|322499633|emb|CBZ34707.1| unnamed protein product [Leishmania donovani BPK282A1] Length = 1092 Score = 103 bits (257), Expect = 2e-20, Method: Composition-based stats. Identities = 34/162 (20%), Positives = 66/162 (40%), Gaps = 20/162 (12%) Query: 49 KEVHDEKIKALEVIIEKA-NAAPIIVAYHFNSDLARLQKAFPQGR-----------TLDK 96 K +H K+ A+ IEK ++V F S L L + + Q R TL + Sbjct: 919 KPLHGTKLDAIANYIEKVPKDEKVVVFSQFGSMLD-LTQYWLQRRSIRAVKLCGSLTLTQ 977 Query: 97 DPCTIQEW-NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTR 155 +Q + ++ + ++ + G GLNLQ N +V WW+ Q ++R Sbjct: 978 RQSVLQAFLHDQNVRVILISLKAGGEGLNLQV-ANHVVLTDPWWNPAVEMQAVQR----- 1031 Query: 156 QRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + G R V + +++++E + K + + ++ Sbjct: 1032 AHRIGQTRPVHAVRFVTEHSVEERMADLQDKKMLVFEGTIDG 1073 >gi|240272910|gb|EER36435.1| lymphocyte-specific helicase [Ajellomyces capsulatus H143] gi|325095672|gb|EGC48982.1| lymphocyte-specific helicase [Ajellomyces capsulatus H88] Length = 983 Score = 103 bits (257), Expect = 2e-20, Method: Composition-based stats. Identities = 31/174 (17%), Positives = 66/174 (37%), Gaps = 23/174 (13%) Query: 43 DEEKHWKEV---HDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQK----------- 86 D+ H + K+ L+ +I + I++ F + L LQ Sbjct: 722 DDPSHIDDTLITSSGKMLLLDRLIPCLMSKGHKILIFSQFKTQLDLLQDYATYLRGWNCC 781 Query: 87 AFPQGRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQ 145 + IQ +N + + + G G+NL + ++ F W+ ++ Sbjct: 782 RIDGAVSQVDRQAQIQAFNTDPDYRIFLLSTRAGGQGINLT-AADTVILFDSDWNPQQDL 840 Query: 146 QMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 Q R + G + V VY L + T+++ +L++ +K ++ L++ K Sbjct: 841 QA-----QDRAHRIGQTKPVIVYRLATRGTVEQTLLEKADSKRRLEKLVIQKGK 889 >gi|42407265|dbj|BAD10849.1| lymphoid specific helicase variant6 [Homo sapiens] gi|119570418|gb|EAW50033.1| helicase, lymphoid-specific, isoform CRA_h [Homo sapiens] Length = 740 Score = 103 bits (257), Expect = 2e-20, Method: Composition-based stats. Identities = 25/159 (15%), Positives = 61/159 (38%), Gaps = 19/159 (11%) Query: 50 EVHDEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQK----------AFPQGRTLDKD 97 + K L+ ++ + +++ S L L + + Sbjct: 497 VTNSGKFLILDRMLPELKKRGHKVLLFSQMTSMLDILMDYCHLRDFNFSRLDGSMSYSER 556 Query: 98 PCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 + +N + ++ + + G G+NL + ++ + W+ + Q +R Sbjct: 557 EKNMHSFNTDPEVFIFLVSTRAGGLGINLT-AADTVIIYDSDWNPQSDLQAQDRC----- 610 Query: 157 RQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 + G + V VY L+ NTID+ +++R K ++ L++ Sbjct: 611 HRIGQTKPVVVYRLVTANTIDQKIVERAAAKRKLEKLII 649 >gi|73998076|ref|XP_859353.1| PREDICTED: similar to helicase, lymphoid-specific isoform 6 [Canis familiaris] Length = 835 Score = 103 bits (257), Expect = 2e-20, Method: Composition-based stats. Identities = 25/149 (16%), Positives = 56/149 (37%), Gaps = 19/149 (12%) Query: 58 ALEVIIEKANAAPIIVAYHFNSDLARLQK----------AFPQGRTLDKDPCTIQEWN-E 106 L + KA +++ L L + + + +N + Sbjct: 604 MLPEL--KARGHKVLLFSQMTRMLDILMDYCHFRNFNFSRLDGSMSYSEREKNMHSFNTD 661 Query: 107 GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVF 166 + + + G G+NL + ++ + W+ + Q +R + G + V Sbjct: 662 PDVFIFLVSTRAGGLGINLT-AADTVIIYDSDWNPQSDLQAQDRC-----HRIGQTKPVV 715 Query: 167 VYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 VY L+ NTID+ +++R K ++ L++ Sbjct: 716 VYRLVTANTIDQKIVERAAAKRKLEKLII 744 >gi|224090059|ref|XP_002308925.1| chromatin remodeling complex subunit [Populus trichocarpa] gi|222854901|gb|EEE92448.1| chromatin remodeling complex subunit [Populus trichocarpa] Length = 1483 Score = 103 bits (257), Expect = 2e-20, Method: Composition-based stats. Identities = 25/112 (22%), Positives = 49/112 (43%), Gaps = 7/112 (6%) Query: 87 AFPQGRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQ 145 T+ ++++ I + + G G+NL + ++F+ W+ Sbjct: 1206 RLDGSSTIMDRRDMVRDFQLRNDIFVFLLSTRAGGLGINLT-AADTVIFYESDWNPTLDL 1264 Query: 146 QMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 Q ++R + G + V VY LI + T++E +LQR K T+Q L++ Sbjct: 1265 QAMDR-----AHRLGQTKDVTVYRLICKETVEEKILQRASQKHTVQQLVMTG 1311 >gi|296220834|ref|XP_002756505.1| PREDICTED: lymphoid-specific helicase isoform 7 [Callithrix jacchus] Length = 707 Score = 103 bits (257), Expect = 2e-20, Method: Composition-based stats. Identities = 25/159 (15%), Positives = 62/159 (38%), Gaps = 19/159 (11%) Query: 50 EVHDEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQK----------AFPQGRTLDKD 97 ++ K L+ ++ + +++ S L L + + Sbjct: 464 VINSGKFLILDRMLPELKKRGHKVLLFSQMTSMLDILMDYCHLRNFNFSRLDGSMSYSER 523 Query: 98 PCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 + +N + ++ + + G G+NL + ++ + W+ + Q +R Sbjct: 524 ERNMHSFNTDPEVFIFLVSTRAGGLGINLT-AADTVIIYDSDWNPQSDLQAQDRC----- 577 Query: 157 RQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 + G + V VY L+ NTID+ +++R K ++ L++ Sbjct: 578 HRIGQTKPVVVYRLVTANTIDQKIVERAAAKRKLEKLII 616 >gi|217076139|ref|YP_002333855.1| helicase [Thermosipho africanus TCF52B] gi|217035992|gb|ACJ74514.1| helicase [Thermosipho africanus TCF52B] Length = 835 Score = 103 bits (257), Expect = 2e-20, Method: Composition-based stats. Identities = 43/191 (22%), Positives = 82/191 (42%), Gaps = 29/191 (15%) Query: 26 ASKTVKCLQLAN-GAVYYDEEKHWKEVHDEKIKALEVI-IEKANAA-PIIVAYHFNSDLA 82 +K LQ+ + GA Y+DE H K+ L+ + IE N ++ F Sbjct: 637 LGLAIKLLQVCDFGADYFDEN---FYKHSGKLNKLKDLMIEIKNKKEKALIFTKFIMTQQ 693 Query: 83 RLQ-----------KAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNI 131 ++ + ++ ++++N+GKI +L +P G GLNL N Sbjct: 694 IIKAFLRNELGIESEILNGTVPIETRNYIVKQFNDGKIDVLIINPRVGGVGLNL-VAANH 752 Query: 132 LVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQ------NTIDELVLQRLR 185 ++ ++ W+ Q +R + G + V+VYY ++ TI+E ++ L Sbjct: 753 VIHYTPEWNPAVTSQATDR-----AYRIGQDKDVYVYYFFSKFRNNHNKTIEEYFMKLLE 807 Query: 186 TKSTIQDLLLN 196 K I+++LL+ Sbjct: 808 RKKQIKNILLD 818 >gi|301768186|ref|XP_002919520.1| PREDICTED: DNA repair and recombination protein RAD54-like [Ailuropoda melanoleuca] Length = 838 Score = 103 bits (257), Expect = 2e-20, Method: Composition-based stats. Identities = 28/139 (20%), Positives = 57/139 (41%), Gaps = 18/139 (12%) Query: 70 PIIVAYHFNSDLARLQK----------AFPQGRTLDKDPCTIQEWNEGKIP--LLFAHPA 117 +++ ++ L +K ++ K ++ +N P + Sbjct: 606 KVVLVSNYTQTLDLFEKLCRARRYLYVRLDGTMSIKKRAKVVERFNNPLSPDFVFMLSSK 665 Query: 118 SCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 + G GLNL G N LV F W+ +Q + R+ + G K+ ++Y L++ TI+ Sbjct: 666 AGGCGLNL-IGANRLVMFDPDWNPANDEQAMARVW-----RDGQKKTCYIYRLLSAGTIE 719 Query: 178 ELVLQRLRTKSTIQDLLLN 196 E + QR K + +++ Sbjct: 720 EKIFQRQSHKKALSSCVVD 738 >gi|281351942|gb|EFB27526.1| hypothetical protein PANDA_008144 [Ailuropoda melanoleuca] Length = 716 Score = 103 bits (257), Expect = 2e-20, Method: Composition-based stats. Identities = 28/139 (20%), Positives = 57/139 (41%), Gaps = 18/139 (12%) Query: 70 PIIVAYHFNSDLARLQK----------AFPQGRTLDKDPCTIQEWNEGKIP--LLFAHPA 117 +++ ++ L +K ++ K ++ +N P + Sbjct: 485 KVVLVSNYTQTLDLFEKLCRARRYLYVRLDGTMSIKKRAKVVERFNNPLSPDFVFMLSSK 544 Query: 118 SCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 + G GLNL G N LV F W+ +Q + R+ + G K+ ++Y L++ TI+ Sbjct: 545 AGGCGLNL-IGANRLVMFDPDWNPANDEQAMARVW-----RDGQKKTCYIYRLLSAGTIE 598 Query: 178 ELVLQRLRTKSTIQDLLLN 196 E + QR K + +++ Sbjct: 599 EKIFQRQSHKKALSSCVVD 617 >gi|73977923|ref|XP_532592.2| PREDICTED: similar to DNA repair and recombination protein RAD54-like (RAD54 homolog) (hRAD54) (hHR54) [Canis familiaris] Length = 907 Score = 103 bits (257), Expect = 2e-20, Method: Composition-based stats. Identities = 28/139 (20%), Positives = 57/139 (41%), Gaps = 18/139 (12%) Query: 70 PIIVAYHFNSDLARLQK----------AFPQGRTLDKDPCTIQEWNEGKIP--LLFAHPA 117 +++ ++ L +K ++ K ++ +N P + Sbjct: 675 KVVLVSNYTQTLDLFEKLCRARRYLYVRLDGTMSIKKRAKVVERFNNPLSPDFVFMLSSK 734 Query: 118 SCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 + G GLNL G N LV F W+ +Q + R+ + G K+ ++Y L++ TI+ Sbjct: 735 AGGCGLNL-IGANRLVMFDPDWNPANDEQAMARVW-----RDGQKKTCYIYRLLSAGTIE 788 Query: 178 ELVLQRLRTKSTIQDLLLN 196 E + QR K + +++ Sbjct: 789 EKIFQRQSHKKALSSCVVD 807 >gi|134106523|ref|XP_778272.1| hypothetical protein CNBA2720 [Cryptococcus neoformans var. neoformans B-3501A] gi|50260975|gb|EAL23625.1| hypothetical protein CNBA2720 [Cryptococcus neoformans var. neoformans B-3501A] Length = 1198 Score = 103 bits (257), Expect = 2e-20, Method: Composition-based stats. Identities = 35/167 (20%), Positives = 67/167 (40%), Gaps = 22/167 (13%) Query: 46 KHWKEVHDEKIKAL----EVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTL------- 94 V K++AL E I ++ A +V F S L ++ + Sbjct: 1009 GKVDLVTSTKLRALLRQLEEIRQEDPKAKALVFSQFTSFLDLIEATLTKQGIRWLRFDGT 1068 Query: 95 ---DKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIE 149 + TI+E+ +L + G GLNL N + WW+ QQ I+ Sbjct: 1069 MSQAQRANTIEEFGRKTNEPLILLISLKAGGVGLNLTM-ANYVFLMDTWWNEAIEQQAID 1127 Query: 150 RIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 R+ + G + V+V I + T+++ +++ R+K+ + + L+ Sbjct: 1128 RV-----HRLGQNKPVYVTRYIIKGTVEKRIMKIQRSKTALVNASLS 1169 >gi|156082073|ref|XP_001608529.1| hypothetical protein [Plasmodium vivax SaI-1] gi|148801100|gb|EDL42505.1| hypothetical protein, conserved [Plasmodium vivax] Length = 3241 Score = 103 bits (257), Expect = 2e-20, Method: Composition-based stats. Identities = 30/181 (16%), Positives = 66/181 (36%), Gaps = 20/181 (11%) Query: 35 LANGAVYYDEEKHWKEVHDEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQ------- 85 L V DE K KI LE ++ + +++ L L Sbjct: 1675 LCCEPVDKDEYKERLVYSSGKICLLEKLLIRLKERGNRVLIFSQMVKMLNILSEYLTLRG 1734 Query: 86 ---KAFPQGRTLDKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWD 140 + + + + +N + + G G+NL + ++ + W+ Sbjct: 1735 FKHQRLDGTMSKEMRKKAMNHFNSKNSDDFVFLLSTKAGGLGINLT-SADTVIIYDSDWN 1793 Query: 141 LEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKK 200 + Q R + G + V +Y L+ +++I++ +L+R + K + L++ L K Sbjct: 1794 PQNDLQAGAR-----AHRIGQTKTVQIYRLVTKDSIEQTILERAKVKMVLDTLVVQGLNK 1848 Query: 201 E 201 + Sbjct: 1849 K 1849 >gi|126342338|ref|XP_001373609.1| PREDICTED: similar to SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, [Monodelphis domestica] Length = 1010 Score = 103 bits (257), Expect = 2e-20, Method: Composition-based stats. Identities = 44/230 (19%), Positives = 90/230 (39%), Gaps = 40/230 (17%) Query: 1 MKQY---HKFQRELYCDLQGENIEAFNSASKTVK------CLQL---ANGAVYYD----- 43 +K Y K QRE Y + ++I+ NSA K K +QL N +D Sbjct: 365 VKIYLGLSKMQREWYTRILMKDIDILNSAGKMDKMRLLNILMQLRKCCNHPYLFDGAEPG 424 Query: 44 ---EEKHWKEVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQ---------KAFP 89 + K+ AL+ ++ K + +++ L L+ Sbjct: 425 PPYTTDTHLVNNSGKMVALDKLLSKLKEQGSRVLIFSQMTRLLDILEDYCMWRGYEYCRL 484 Query: 90 QGRTL-DKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 G+T ++ I +N + + G G+NL ++++ + W+ + Q Sbjct: 485 DGQTPHEEREEAIDTFNAPNSTKFIFMLSTRAGGLGINL-ATADVVILYDSDWNPQVDLQ 543 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 ++R + G K+ V V+ LI NT+++ +++R K + +++ Sbjct: 544 AMDR-----AHRIGQKKPVRVFRLITDNTVEDRIVERAEIKLRLDSIVIQ 588 >gi|224058089|ref|XP_002191829.1| PREDICTED: RAD54-like (S. cerevisiae) [Taeniopygia guttata] Length = 757 Score = 103 bits (257), Expect = 2e-20, Method: Composition-based stats. Identities = 34/169 (20%), Positives = 67/169 (39%), Gaps = 23/169 (13%) Query: 44 EEKHWKEVHDEKIKALEVII----EKANAAPIIVAYHFNSDLARLQK----------AFP 89 K + K+ L+ I+ +N ++V ++ L +K Sbjct: 499 STKSVEPQLSGKMLVLDYILAVTKSTSNDKVVLV-SNYTQTLDLFEKLCRSRRYLYVRLD 557 Query: 90 QGRTLDKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQM 147 ++ K ++ +N P + + G GLNL G N LV F W+ +Q Sbjct: 558 GTMSIKKRAKIVERFNSPSSPEFIFMLSSKAGGCGLNL-IGANRLVMFDPDWNPANDEQA 616 Query: 148 IERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + R+ + G K+ ++Y L++ TI+E + QR K + +++ Sbjct: 617 MARVW-----RDGQKKMCYIYRLLSTGTIEEKIFQRQTHKKALSSCVVD 660 >gi|312922352|ref|NP_001099924.2| transcription termination factor 2 [Rattus norvegicus] Length = 1142 Score = 103 bits (257), Expect = 2e-20, Method: Composition-based stats. Identities = 35/166 (21%), Positives = 67/166 (40%), Gaps = 18/166 (10%) Query: 43 DEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLA---------RLQKAFPQGRT 93 D+ + +V + LE I + + ++ + S L RL A G Sbjct: 965 DDIRRSTKVSS-LLAELEAIQKGPGSQKSVIVSQWTSMLQVVALHLRKNRLTYATIDGSV 1023 Query: 94 LDKDPCT-IQEWNEGKIP-LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERI 151 K ++ +N + P ++ + G GLNL GGN L + W+ Q +RI Sbjct: 1024 NPKQRMDLVEAFNHSQGPQVMLISLLAGGVGLNLT-GGNHLFLLDMHWNPSLEDQACDRI 1082 Query: 152 GVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + G ++ V ++ + + T++E +LQ K + +L+ Sbjct: 1083 -----YRVGQEKDVVMHRFVCEGTVEEKILQLQEKKKDLAKQVLSG 1123 >gi|58258561|ref|XP_566693.1| DNA repair protein RAD5 [Cryptococcus neoformans var. neoformans JEC21] gi|74687780|sp|Q5KPG8|RAD5_CRYNE RecName: Full=DNA repair protein RAD5 gi|57222830|gb|AAW40874.1| DNA repair protein RAD5, putative [Cryptococcus neoformans var. neoformans JEC21] Length = 1198 Score = 103 bits (257), Expect = 2e-20, Method: Composition-based stats. Identities = 35/167 (20%), Positives = 67/167 (40%), Gaps = 22/167 (13%) Query: 46 KHWKEVHDEKIKAL----EVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTL------- 94 V K++AL E I ++ A +V F S L ++ + Sbjct: 1009 GKVDLVTSTKLRALLRQLEEIRQEDPKAKALVFSQFTSFLDLIEATLTKQGIRWLRFDGT 1068 Query: 95 ---DKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIE 149 + TI+E+ +L + G GLNL N + WW+ QQ I+ Sbjct: 1069 MSQAQRANTIEEFGRKTNEPLILLISLKAGGVGLNLTM-ANYVFLMDTWWNEAIEQQAID 1127 Query: 150 RIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 R+ + G + V+V I + T+++ +++ R+K+ + + L+ Sbjct: 1128 RV-----HRLGQNKPVYVTRYIIKGTVEKRIMKIQRSKTALVNASLS 1169 >gi|213983091|ref|NP_001135693.1| helicase, lymphoid-specific [Xenopus (Silurana) tropicalis] gi|197246289|gb|AAI69179.1| Unknown (protein for MGC:189674) [Xenopus (Silurana) tropicalis] gi|197246404|gb|AAI68798.1| Unknown (protein for MGC:188967) [Xenopus (Silurana) tropicalis] Length = 840 Score = 103 bits (257), Expect = 2e-20, Method: Composition-based stats. Identities = 26/157 (16%), Positives = 59/157 (37%), Gaps = 19/157 (12%) Query: 52 HDEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQK----------AFPQGRTLDKDPC 99 K L+ ++ + +++ L L + Sbjct: 602 SSGKFLLLDRLLPEMKKRGHKVLIFSQMTMMLDILMDYCYYKKFNFCRLDGSMSYSDREE 661 Query: 100 TIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQ 158 ++++N E + + + G G+NL + ++ + W+ + Q +R + Sbjct: 662 NMRKFNTEPDVFIFLVSTRAGGLGINLT-AADTVIIYDSDWNPQADLQAQDRC-----HR 715 Query: 159 AGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 G R V VY L+ NTID+ +++R K ++ L++ Sbjct: 716 IGQTRPVVVYRLVTANTIDQKIVERAAAKRKLEKLVI 752 >gi|193596661|ref|XP_001945595.1| PREDICTED: chromatin-remodeling complex ATPase chain Iswi-like [Acyrthosiphon pisum] Length = 1048 Score = 103 bits (257), Expect = 2e-20, Method: Composition-based stats. Identities = 51/235 (21%), Positives = 93/235 (39%), Gaps = 50/235 (21%) Query: 1 MKQY---HKFQRELYCDLQGENIEAFNSASKTVK------CLQLAN-------------G 38 +K Y K QRE Y + ++I+ N A K K +QL G Sbjct: 390 VKVYVGLSKLQREWYTKVLMKDIDVVNGAGKVEKMRLQNILMQLRKCSNHPYLFDGAEPG 449 Query: 39 AVYYDEEKHW-----KEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAF----- 88 Y +E V D+ +KAL+ + ++V + L+ Sbjct: 450 PPYTTDEHIVFNCGKMVVFDKLLKALKE-----QDSRVLVFSQMTRMMDILEDYMHWKGY 504 Query: 89 ----PQGRTLDKDPC-TIQEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDL 141 G+T +D I E+NE K + + G G+NL ++++ + W+ Sbjct: 505 NYCRLDGQTPHEDRQRQINEYNEPNSKKFVFILSTRAGGLGINL-ATADVVIIYDSDWNP 563 Query: 142 EEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + Q ++R + G K+ V V+ LI +NT++E +++R K + L++ Sbjct: 564 QMDLQAMDR-----AHRIGQKKQVRVFRLITENTVEEKIVERAEVKLRLDKLVIQ 613 >gi|316968996|gb|EFV53166.1| putative SNF2 family N- domain protein [Trichinella spiralis] Length = 1667 Score = 103 bits (257), Expect = 2e-20, Method: Composition-based stats. Identities = 32/165 (19%), Positives = 66/165 (40%), Gaps = 21/165 (12%) Query: 55 KIKALEVIIE--KANAAPIIVAYHFNSDLARLQK----------AFPQGRTLDKDPCTIQ 102 K+++L ++ +A ++ L L+ +++ ++ Sbjct: 1268 KLQSLSALLRRLQAEGHRCLIFTQMARMLDILEAFLSYHGYMYLRLDGATNIERRQMLME 1327 Query: 103 EWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGF 161 +N + KI S G G+NL G + ++F+ W+ Q +R + G Sbjct: 1328 RFNHDKKILCFILSTRSGGVGVNLT-GADTVIFYDSDWNPTMDAQAQDRC-----HRIGQ 1381 Query: 162 KRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN--ALKKETIH 204 R V +Y LI + TI+E +L + K + +L ++ K + H Sbjct: 1382 TRDVHIYRLICERTIEENILLKATQKRKLGELAIDEGGFKADFFH 1426 >gi|316963964|gb|EFV49303.1| conserved hypothetical protein [Trichinella spiralis] Length = 1024 Score = 103 bits (257), Expect = 2e-20, Method: Composition-based stats. Identities = 32/165 (19%), Positives = 66/165 (40%), Gaps = 21/165 (12%) Query: 55 KIKALEVIIE--KANAAPIIVAYHFNSDLARLQK----------AFPQGRTLDKDPCTIQ 102 K+++L ++ +A ++ L L+ +++ ++ Sbjct: 625 KLQSLSALLRRLQAEGHRCLIFTQMARMLDILEAFLSYHGYMYLRLDGATNIERRQMLME 684 Query: 103 EWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGF 161 +N + KI S G G+NL G + ++F+ W+ Q +R + G Sbjct: 685 RFNHDKKILCFILSTRSGGVGVNLT-GADTVIFYDSDWNPTMDAQAQDRC-----HRIGQ 738 Query: 162 KRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN--ALKKETIH 204 R V +Y LI + TI+E +L + K + +L ++ K + H Sbjct: 739 TRDVHIYRLICERTIEENILLKATQKRKLGELAIDEGGFKADFFH 783 >gi|297829816|ref|XP_002882790.1| photoperiod-independent early flowering 1 [Arabidopsis lyrata subsp. lyrata] gi|297328630|gb|EFH59049.1| photoperiod-independent early flowering 1 [Arabidopsis lyrata subsp. lyrata] Length = 2057 Score = 103 bits (257), Expect = 2e-20, Method: Composition-based stats. Identities = 36/166 (21%), Positives = 71/166 (42%), Gaps = 19/166 (11%) Query: 44 EEKHWKEVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQ---------KAFPQGR 92 ++ + K++ L +++ K ++ L L+ G Sbjct: 1068 PDRRLIQFDCGKLQELAMLLRKLKFGGHRALIFTQMTKMLDVLEAFINLYGYTYMRLDGS 1127 Query: 93 TLDKDPCTI-QEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 T ++ T+ Q +N KI L S G G+NL G + ++F+ W+ QQ +R Sbjct: 1128 TPPEERQTLMQRFNTNPKIFLFILSTRSGGVGINL-VGADTVIFYDSDWNPAMDQQAQDR 1186 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + G R V +Y LI+++TI+E +L++ K + +L++ Sbjct: 1187 C-----HRIGQTREVHIYRLISESTIEENILKKANQKRVLDNLVIQ 1227 >gi|255548778|ref|XP_002515445.1| chromodomain helicase DNA binding protein, putative [Ricinus communis] gi|223545389|gb|EEF46894.1| chromodomain helicase DNA binding protein, putative [Ricinus communis] Length = 1470 Score = 103 bits (257), Expect = 2e-20, Method: Composition-based stats. Identities = 30/166 (18%), Positives = 62/166 (37%), Gaps = 20/166 (12%) Query: 52 HDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARL---------QKAFPQGRTLDKDPCT 100 K++ L+ ++ + +++ F L L Q G+ + Sbjct: 603 SSGKLQLLDKMMVRLKEQGHRVLIYSQFQHMLDLLEDYCTYKKWQYERIDGKVGGAERQV 662 Query: 101 -IQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 I +N + G G+NL + ++ + W+ Q + R Sbjct: 663 RIDRFNAKNSSRFCFLLSTRAGGLGINL-ATADTVIIYDSDWNPHADLQAMAR-----AH 716 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETI 203 + G V +Y LI + TI+E ++Q + K ++ L++ LK + I Sbjct: 717 RLGQTNKVMIYRLITRGTIEERMMQMTKKKMVLEHLVVGRLKAQNI 762 >gi|38344264|emb|CAE02069.2| OSJNBa0005N02.1 [Oryza sativa Japonica Group] gi|38345412|emb|CAE03103.2| OSJNBa0017B10.18 [Oryza sativa Japonica Group] gi|116309716|emb|CAH66762.1| OSIGBa0158F05.11 [Oryza sativa Indica Group] Length = 863 Score = 103 bits (257), Expect = 2e-20, Method: Composition-based stats. Identities = 25/162 (15%), Positives = 65/162 (40%), Gaps = 19/162 (11%) Query: 49 KEVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQ----------KAFPQGRTLDK 96 + K +AL ++ + +++ + + L L+ + G + + Sbjct: 683 HVLGSAKCQALAELLPSLANDGHRVLIFSQWTTMLDILEWTLEVIGVTYRRLDGGTPVTE 742 Query: 97 DPCTIQEWNEGK-IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTR 155 + +N + I + G GLNL G + ++ + ++ + +Q +R Sbjct: 743 RQTIVDTFNNDRSIFACLLSTRAGGQGLNL-IGADTVIIHDMDFNPQMDRQAEDRC---- 797 Query: 156 QRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + G ++ V +Y L+ + ++DE + + R K + +L + Sbjct: 798 -HRIGQQKPVTIYRLVTKGSVDENIYEIARRKLVLDAAILQS 838 >gi|326473788|gb|EGD97797.1| SNF2 family helicase/ATPase [Trichophyton tonsurans CBS 112818] gi|326485394|gb|EGE09404.1| SNF2 family helicase/ATPase PasG [Trichophyton equinum CBS 127.97] Length = 861 Score = 103 bits (257), Expect = 2e-20, Method: Composition-based stats. Identities = 27/146 (18%), Positives = 55/146 (37%), Gaps = 18/146 (12%) Query: 66 ANAAPIIVAYHFNSDLARLQKAFPQGR------------TLDKDPCTIQEWNEGKIPLLF 113 + +++ F L L+ Q R D+ N+ + Sbjct: 631 SKGHKVLIFSQFKGQLDILEDWATQLRSWNCCRIDGAIAQADRQEQINAFNNDPDYRIFL 690 Query: 114 AHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQ 173 + G G+NL + ++ F W+ ++ Q R + G + V VY L + Sbjct: 691 LSTRAGGQGINLT-AADTVILFDSDWNPQQDLQA-----QDRAHRIGQTKPVIVYRLATR 744 Query: 174 NTIDELVLQRLRTKSTIQDLLLNALK 199 TI++ +L+R +K ++ L++ K Sbjct: 745 GTIEQTLLERAGSKRRLEKLVIQKGK 770 >gi|218195384|gb|EEC77811.1| hypothetical protein OsI_17009 [Oryza sativa Indica Group] Length = 909 Score = 103 bits (256), Expect = 2e-20, Method: Composition-based stats. Identities = 25/162 (15%), Positives = 65/162 (40%), Gaps = 19/162 (11%) Query: 49 KEVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQ----------KAFPQGRTLDK 96 + K +AL ++ + +++ + + L L+ + G + + Sbjct: 683 HVLGSAKCQALAELLPSLANDGHRVLIFSQWTTMLDILEWTLEVIGVTYRRLDGGTPVTE 742 Query: 97 DPCTIQEWNEGK-IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTR 155 + +N + I + G GLNL G + ++ + ++ + +Q +R Sbjct: 743 RQTIVDTFNNDRSIFACLLSTRAGGQGLNL-IGADTVIIHDMDFNPQMDRQAEDRC---- 797 Query: 156 QRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + G ++ V +Y L+ + ++DE + + R K + +L + Sbjct: 798 -HRIGQQKPVTIYRLVTKGSVDENIYEIARRKLVLDAAILQS 838 >gi|190345390|gb|EDK37263.2| hypothetical protein PGUG_01361 [Meyerozyma guilliermondii ATCC 6260] Length = 1103 Score = 103 bits (256), Expect = 2e-20, Method: Composition-based stats. Identities = 42/206 (20%), Positives = 81/206 (39%), Gaps = 32/206 (15%) Query: 4 YHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVII 63 Y + E + E F S + ++ NG KI+ ++ Sbjct: 884 YDEEAIEDLFSPKSRAPEKFTSTDIISRLIEETNGF-----------TPSTKIEKCIELV 932 Query: 64 EK----ANAAPIIVAYHFN--SDLARL---QKAFPQGR-----TLDKDPCTIQEWNEGKI 109 + ++ IIV F DL +L +K P R +LD TI+ + +G Sbjct: 933 NQIRTKSSEEKIIVFSQFTTLFDLMKLVLDKKGIPFLRYDGSMSLDARNNTIKNFYQGST 992 Query: 110 PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYY 169 +L + GL L N ++ +W+ +Q ++R + G +R VFV+ Sbjct: 993 QVLLISLRAGNVGLTLTC-ANHVILMDPFWNPFVEEQAMDR-----AHRIGQQREVFVHR 1046 Query: 170 LIAQNTIDELVLQRLR-TKSTIQDLL 194 ++ +TI+ +++ + K +Q+ L Sbjct: 1047 ILLNDTIEGRIMELQKYKKEMVQNAL 1072 >gi|73998068|ref|XP_543938.2| PREDICTED: similar to helicase, lymphoid-specific isoform 1 [Canis familiaris] Length = 837 Score = 103 bits (256), Expect = 2e-20, Method: Composition-based stats. Identities = 25/149 (16%), Positives = 56/149 (37%), Gaps = 19/149 (12%) Query: 58 ALEVIIEKANAAPIIVAYHFNSDLARLQK----------AFPQGRTLDKDPCTIQEWN-E 106 L + KA +++ L L + + + +N + Sbjct: 606 MLPEL--KARGHKVLLFSQMTRMLDILMDYCHFRNFNFSRLDGSMSYSEREKNMHSFNTD 663 Query: 107 GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVF 166 + + + G G+NL + ++ + W+ + Q +R + G + V Sbjct: 664 PDVFIFLVSTRAGGLGINLT-AADTVIIYDSDWNPQSDLQAQDRC-----HRIGQTKPVV 717 Query: 167 VYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 VY L+ NTID+ +++R K ++ L++ Sbjct: 718 VYRLVTANTIDQKIVERAAAKRKLEKLII 746 >gi|85014197|ref|XP_955594.1| DNA repair and recombination protein [Encephalitozoon cuniculi GB-M1] gi|19171288|emb|CAD27013.1| RAD26-LIKE DNA REPAIR AND RECOMBINATION PROTEIN [Encephalitozoon cuniculi GB-M1] Length = 695 Score = 103 bits (256), Expect = 2e-20, Method: Composition-based stats. Identities = 35/156 (22%), Positives = 64/156 (41%), Gaps = 17/156 (10%) Query: 52 HDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAFPQ-------GRT-LDKDPCTI 101 KIK L +++ ++ ++V L +++ + GRT P + Sbjct: 466 SSCKIKILVDLLKKWRSEGNKVLVFSQTIRMLDIIERCVRKYTYLRMDGRTPTSSRPGLV 525 Query: 102 QEWNEG-KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 +NE + L G GLNL G + +V + W+ Q ER + G Sbjct: 526 DRFNEDEDVFLFLLTTKVGGLGLNLT-GASRIVIYDPDWNPSTDTQAKERAW-----RYG 579 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 K+ V +Y + ++TI+E V Q+ K + +L+ Sbjct: 580 QKKGVEIYRFVCKDTIEEKVYQKQIFKDLLGKKVLS 615 >gi|331244727|ref|XP_003335003.1| SNF2 family ATP-dependent chromatin-remodeling factor snf21 [Puccinia graminis f. sp. tritici CRL 75-36-700-3] gi|309313993|gb|EFP90584.1| SNF2 family ATP-dependent chromatin-remodeling factor snf21 [Puccinia graminis f. sp. tritici CRL 75-36-700-3] Length = 964 Score = 103 bits (256), Expect = 2e-20, Method: Composition-based stats. Identities = 41/204 (20%), Positives = 81/204 (39%), Gaps = 27/204 (13%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEV 61 QY +R L + + KT++ + +N ++ D KE+ K Sbjct: 696 AQYKSLRR---FQLSRDEF-FNSGKVKTLQLILASNNNLHADPSSSSKEIDKSK------ 745 Query: 62 IIEKANAAPIIVAYHFNSDLARLQKAFP---------QGRTLDKDPCTIQEW--NEGKIP 110 I+++ + + ++ F L L+ G+T + ++ + N+ I Sbjct: 746 IVKQDSPSRFLIFSQFTQMLDILKVVLKLLDVKFLVLTGQTNVTERQSLVDQFTNDPSIT 805 Query: 111 LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYL 170 + + G GLNL + ++ F ++ +R R + G R V V+ L Sbjct: 806 VFLLSTRAGGLGLNL-MAADTVILFDQDFNPH-----NDRQAEDRAYRLGQTRDVKVFKL 859 Query: 171 IAQNTIDELVLQRLRTKSTIQDLL 194 I++ TI+E +LQ TK I + + Sbjct: 860 ISKGTIEEDILQLASTKIEIDNSI 883 >gi|119570417|gb|EAW50032.1| helicase, lymphoid-specific, isoform CRA_g [Homo sapiens] Length = 873 Score = 103 bits (256), Expect = 2e-20, Method: Composition-based stats. Identities = 25/159 (15%), Positives = 61/159 (38%), Gaps = 19/159 (11%) Query: 50 EVHDEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQK----------AFPQGRTLDKD 97 + K L+ ++ + +++ S L L + + Sbjct: 595 VTNSGKFLILDRMLPELKKRGHKVLLFSQMTSMLDILMDYCHLRDFNFSRLDGSMSYSER 654 Query: 98 PCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 + +N + ++ + + G G+NL + ++ + W+ + Q +R Sbjct: 655 EKNMHSFNTDPEVFIFLVSTRAGGLGINLT-AADTVIIYDSDWNPQSDLQAQDRC----- 708 Query: 157 RQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 + G + V VY L+ NTID+ +++R K ++ L++ Sbjct: 709 HRIGQTKPVVVYRLVTANTIDQKIVERAAAKRKLEKLII 747 >gi|114631877|ref|XP_001151592.1| PREDICTED: helicase, lymphoid-specific isoform 15 [Pan troglodytes] Length = 877 Score = 103 bits (256), Expect = 2e-20, Method: Composition-based stats. Identities = 25/159 (15%), Positives = 61/159 (38%), Gaps = 19/159 (11%) Query: 50 EVHDEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQK----------AFPQGRTLDKD 97 + K L+ ++ + +++ S L L + + Sbjct: 595 VTNSGKFLILDRMLPELKKRGHKVLLFSQMTSMLDILMDYCHLRDFNFSRLDGSMSYSER 654 Query: 98 PCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 + +N + ++ + + G G+NL + ++ + W+ + Q +R Sbjct: 655 EKNMHSFNTDPEVFIFLVSTRAGGLGINLT-AADTVIIYDSDWNPQSDLQAQDRC----- 708 Query: 157 RQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 + G + V VY L+ NTID+ +++R K ++ L++ Sbjct: 709 HRIGQTKPVVVYRLVTANTIDQKIVERAAAKRKLEKLII 747 >gi|60688369|gb|AAH90481.1| Hells protein [Danio rerio] Length = 252 Score = 103 bits (256), Expect = 2e-20, Method: Composition-based stats. Identities = 29/139 (20%), Positives = 57/139 (41%), Gaps = 17/139 (12%) Query: 68 AAPIIVAYHFNSDLARLQ-----KAFPQGRT------LDKDPCTIQEWNEGKIPLLFAHP 116 +++ S L L + + R D+D + ++ ++ L Sbjct: 30 GHKVLIFSQMTSILDILMDYCYLRGYEYSRLDGSMSYADRDENMKKFSSDPEVFLFLLST 89 Query: 117 ASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTI 176 + G G+NL + ++ F W+ + Q +R + G + V VY LI NTI Sbjct: 90 RAGGLGINLT-SADTVIIFDSDWNPQADLQAQDRC-----HRIGQTKPVVVYRLITANTI 143 Query: 177 DELVLQRLRTKSTIQDLLL 195 DE +L+R K ++ +++ Sbjct: 144 DEKILERASAKRKLEKMVI 162 >gi|297490772|ref|XP_002698437.1| PREDICTED: helicase, lymphoid specific-like [Bos taurus] gi|296472735|gb|DAA14850.1| helicase, lymphoid specific-like [Bos taurus] Length = 784 Score = 103 bits (256), Expect = 2e-20, Method: Composition-based stats. Identities = 26/149 (17%), Positives = 55/149 (36%), Gaps = 19/149 (12%) Query: 58 ALEVIIEKANAAPIIVAYHFNSDLARLQK----------AFPQGRTLDKDPCTIQEWN-E 106 L + K +++ L L + + I +N + Sbjct: 553 MLPEL--KTRGHKVLLFSQMTRMLDILMDYCHFRNFNFSRLDGSMSYSEREKNIHSFNTD 610 Query: 107 GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVF 166 + + + G G+NL + ++ + W+ + Q +R + G R V Sbjct: 611 PDVFIFLVSTRAGGLGINLT-AADTVIIYDSDWNPQSDLQAQDRC-----HRIGQTRPVV 664 Query: 167 VYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 VY L+ NTID+ +++R K ++ L++ Sbjct: 665 VYRLVTANTIDQKIVERAAAKRKLEKLII 693 >gi|296082077|emb|CBI21082.3| unnamed protein product [Vitis vinifera] Length = 1356 Score = 103 bits (256), Expect = 2e-20, Method: Composition-based stats. Identities = 31/166 (18%), Positives = 62/166 (37%), Gaps = 20/166 (12%) Query: 52 HDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARL---------QKAFPQGRTLDKDPCT 100 K++ L+ ++ K +++ F L L Q G+ + Sbjct: 606 SSGKLQLLDKMMVKLKEQGHRVLIYSQFQHMLDLLEDYCTYKKWQYERIDGKVGGAERQV 665 Query: 101 -IQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 I +N + G G+NL + ++ + W+ Q + R Sbjct: 666 RIDRFNAKNSSRFCFLLSTRAGGLGINL-ATADTVIIYDSDWNPHADLQAMAR-----AH 719 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETI 203 + G V +Y LI + TI+E ++Q + K ++ L++ LK + I Sbjct: 720 RLGQTNKVLIYRLITRGTIEERMMQMTKKKMVLEHLVVGRLKAQNI 765 >gi|114631901|ref|XP_507937.2| PREDICTED: helicase, lymphoid-specific isoform 16 [Pan troglodytes] Length = 700 Score = 103 bits (256), Expect = 2e-20, Method: Composition-based stats. Identities = 25/159 (15%), Positives = 61/159 (38%), Gaps = 19/159 (11%) Query: 50 EVHDEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQK----------AFPQGRTLDKD 97 + K L+ ++ + +++ S L L + + Sbjct: 457 VTNSGKFLILDRMLPELKKRGHKVLLFSQMTSMLDILMDYCHLRDFNFSRLDGSMSYSER 516 Query: 98 PCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 + +N + ++ + + G G+NL + ++ + W+ + Q +R Sbjct: 517 EKNMHSFNTDPEVFIFLVSTRAGGLGINLT-AADTVIIYDSDWNPQSDLQAQDRC----- 570 Query: 157 RQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 + G + V VY L+ NTID+ +++R K ++ L++ Sbjct: 571 HRIGQTKPVVVYRLVTANTIDQKIVERAAAKRKLEKLII 609 >gi|162312253|ref|NP_596080.2| TATA-binding protein associated factor Mot1 [Schizosaccharomyces pombe 972h-] gi|81170682|sp|O43065|MOT1_SCHPO RecName: Full=Probable helicase mot1; AltName: Full=Modifier of transcription 1; AltName: Full=TBP-associated factor mot1 gi|157310435|emb|CAA21270.2| TATA-binding protein associated factor Mot1 [Schizosaccharomyces pombe] Length = 1953 Score = 103 bits (256), Expect = 2e-20, Method: Composition-based stats. Identities = 32/185 (17%), Positives = 61/185 (32%), Gaps = 27/185 (14%) Query: 26 ASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQ 85 A K QL + + + A+ +++ L ++ Sbjct: 1701 APKLTALGQLLRDCGLGNSSVNSNGIDSALTNAVSE-------HRVLIFCQLKDMLDMVE 1753 Query: 86 KAFPQG--------------RTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNI 131 K Q + + N+ I +L G GLNL G + Sbjct: 1754 KDLLQATMPDVTYMRLDGSVEPTKRQEAVTKFNNDPSIDVLLLTTHVGGLGLNLT-GADT 1812 Query: 132 LVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQ 191 ++F W+ Q ++R + G K+ V VY LI + ++E ++ R K + Sbjct: 1813 VIFVEHDWNPMRDLQAMDR-----AHRIGQKKVVNVYRLITRGCLEEKIMGLQRFKMNVA 1867 Query: 192 DLLLN 196 ++N Sbjct: 1868 STVVN 1872 >gi|256818868|ref|YP_003140147.1| Non-specific serine/threonine protein kinase [Capnocytophaga ochracea DSM 7271] gi|256580451|gb|ACU91586.1| Non-specific serine/threonine protein kinase [Capnocytophaga ochracea DSM 7271] Length = 950 Score = 103 bits (256), Expect = 2e-20, Method: Composition-based stats. Identities = 35/191 (18%), Positives = 79/191 (41%), Gaps = 20/191 (10%) Query: 18 ENIEAFNSASKTVKCLQLANGAVYYD-EEKHWKEVHDEKIKALEVIIEKANAAPIIVAYH 76 E I FN+ + ++ +++ D E K ++E I +E +++ + ++ Sbjct: 751 EPITEFNTLNMLMRLRKISLHPKLVDKESKIASGKYEEVINYMEELLQSS--RKALIFSS 808 Query: 77 FNSDLAR---------LQKAFPQGRT--LDKDPCTIQEWNEGKIPLLFAHPASCGHGLNL 125 F S LA ++ A G T ++ N I F + GLNL Sbjct: 809 FVSHLALYEEWCNKKGIKYAKLTGETPSFERKNQVEMFQNNPSISFFFISLKAGEVGLNL 868 Query: 126 QYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLR 185 + ++ WW+ +Q I R + + V V ++++TI+E +++ + Sbjct: 869 TQ-ASYVLLLDPWWNPFSEKQAIGR-----AHRIEQQNKVNVIRFVSKDTIEEKIIKLQK 922 Query: 186 TKSTIQDLLLN 196 +K+ + + +++ Sbjct: 923 SKTELSENIID 933 >gi|119570414|gb|EAW50029.1| helicase, lymphoid-specific, isoform CRA_d [Homo sapiens] Length = 700 Score = 103 bits (256), Expect = 2e-20, Method: Composition-based stats. Identities = 25/159 (15%), Positives = 61/159 (38%), Gaps = 19/159 (11%) Query: 50 EVHDEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQK----------AFPQGRTLDKD 97 + K L+ ++ + +++ S L L + + Sbjct: 457 VTNSGKFLILDRMLPELKKRGHKVLLFSQMTSMLDILMDYCHLRDFNFSRLDGSMSYSER 516 Query: 98 PCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 + +N + ++ + + G G+NL + ++ + W+ + Q +R Sbjct: 517 EKNMHSFNTDPEVFIFLVSTRAGGLGINLT-AADTVIIYDSDWNPQSDLQAQDRC----- 570 Query: 157 RQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 + G + V VY L+ NTID+ +++R K ++ L++ Sbjct: 571 HRIGQTKPVVVYRLVTANTIDQKIVERAAAKRKLEKLII 609 >gi|114631875|ref|XP_001151210.1| PREDICTED: helicase, lymphoid-specific isoform 9 [Pan troglodytes] Length = 884 Score = 103 bits (256), Expect = 2e-20, Method: Composition-based stats. Identities = 25/159 (15%), Positives = 61/159 (38%), Gaps = 19/159 (11%) Query: 50 EVHDEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQK----------AFPQGRTLDKD 97 + K L+ ++ + +++ S L L + + Sbjct: 641 VTNSGKFLILDRMLPELKKRGHKVLLFSQMTSMLDILMDYCHLRDFNFSRLDGSMSYSER 700 Query: 98 PCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 + +N + ++ + + G G+NL + ++ + W+ + Q +R Sbjct: 701 EKNMHSFNTDPEVFIFLVSTRAGGLGINLT-AADTVIIYDSDWNPQSDLQAQDRC----- 754 Query: 157 RQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 + G + V VY L+ NTID+ +++R K ++ L++ Sbjct: 755 HRIGQTKPVVVYRLVTANTIDQKIVERAAAKRKLEKLII 793 >gi|330469460|ref|YP_004407203.1| non-specific serine/threonine protein kinase [Verrucosispora maris AB-18-032] gi|328812431|gb|AEB46603.1| non-specific serine/threonine protein kinase [Verrucosispora maris AB-18-032] Length = 1040 Score = 103 bits (256), Expect = 2e-20, Method: Composition-based stats. Identities = 29/211 (13%), Positives = 63/211 (29%), Gaps = 24/211 (11%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASK--TVKCLQLANGAVYYDEEKHWKEVHDEKIKAL 59 Y ++ ++ + Q+ N + K+ L Sbjct: 809 ALYQVVVDDMMARIEASEGIERRGLVLATMTRLKQVCNHPAQLLRDGSALAGRSGKLARL 868 Query: 60 EVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRT------------LDKDPCTIQEWN 105 E I+++ A ++ + ++ + + R + + Sbjct: 869 EEILDEVLAAGEKALLFTQY-AEFGGMLRGHLSARFGREVLFLHGGLGKADRDEMVTRFQ 927 Query: 106 EGKIP-LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA 164 P L + G GL L N +V WW+ Q +R + G +R Sbjct: 928 SDDGPALFVLSLKAGGTGLTLT-AANHVVHVDRWWNPAVEDQATDR-----AFRIGQRRR 981 Query: 165 VFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 V V + T++E V + K ++ ++ Sbjct: 982 VQVRKFVCAGTVEEKVAALIADKRSLAASVV 1012 >gi|119570422|gb|EAW50037.1| helicase, lymphoid-specific, isoform CRA_l [Homo sapiens] Length = 714 Score = 103 bits (256), Expect = 2e-20, Method: Composition-based stats. Identities = 25/159 (15%), Positives = 61/159 (38%), Gaps = 19/159 (11%) Query: 50 EVHDEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQK----------AFPQGRTLDKD 97 + K L+ ++ + +++ S L L + + Sbjct: 471 VTNSGKFLILDRMLPELKKRGHKVLLFSQMTSMLDILMDYCHLRDFNFSRLDGSMSYSER 530 Query: 98 PCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 + +N + ++ + + G G+NL + ++ + W+ + Q +R Sbjct: 531 EKNMHSFNTDPEVFIFLVSTRAGGLGINLT-AADTVIIYDSDWNPQSDLQAQDRC----- 584 Query: 157 RQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 + G + V VY L+ NTID+ +++R K ++ L++ Sbjct: 585 HRIGQTKPVVVYRLVTANTIDQKIVERAAAKRKLEKLII 623 >gi|114631903|ref|XP_001150736.1| PREDICTED: helicase, lymphoid-specific isoform 2 [Pan troglodytes] Length = 714 Score = 103 bits (256), Expect = 2e-20, Method: Composition-based stats. Identities = 25/159 (15%), Positives = 61/159 (38%), Gaps = 19/159 (11%) Query: 50 EVHDEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQK----------AFPQGRTLDKD 97 + K L+ ++ + +++ S L L + + Sbjct: 471 VTNSGKFLILDRMLPELKKRGHKVLLFSQMTSMLDILMDYCHLRDFNFSRLDGSMSYSER 530 Query: 98 PCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 + +N + ++ + + G G+NL + ++ + W+ + Q +R Sbjct: 531 EKNMHSFNTDPEVFIFLVSTRAGGLGINLT-AADTVIIYDSDWNPQSDLQAQDRC----- 584 Query: 157 RQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 + G + V VY L+ NTID+ +++R K ++ L++ Sbjct: 585 HRIGQTKPVVVYRLVTANTIDQKIVERAAAKRKLEKLII 623 >gi|169763362|ref|XP_001727581.1| SNF2 family helicase/ATPase PasG [Aspergillus oryzae RIB40] gi|83770609|dbj|BAE60742.1| unnamed protein product [Aspergillus oryzae] Length = 868 Score = 103 bits (256), Expect = 2e-20, Method: Composition-based stats. Identities = 33/163 (20%), Positives = 65/163 (39%), Gaps = 20/163 (12%) Query: 51 VHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQK----------AFPQGRTLDKDP 98 K+ L+ ++ + AN I++ F S L LQ G D Sbjct: 626 TASGKMLLLDRLVTRLLANGHKILIFSQFKSQLDILQDWATQLRSWNCCRIDGAISQTDR 685 Query: 99 CT-IQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 I+ +N + + + G G+NL + ++ F W+ ++ Q R Sbjct: 686 RDQIKAFNTDPDYKIFLLSTRAGGQGINL-MAADTVILFDSDWNPQQDLQA-----QDRA 739 Query: 157 RQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 + G R V VY L + T+++ +L++ +K ++ L++ K Sbjct: 740 HRIGQTRPVIVYRLATKGTVEQTLLEKADSKRRLERLVIQKGK 782 >gi|42407269|dbj|BAD10851.1| lymphoid specific helicase variant8 [Homo sapiens] gi|119570412|gb|EAW50027.1| helicase, lymphoid-specific, isoform CRA_b [Homo sapiens] Length = 884 Score = 103 bits (256), Expect = 2e-20, Method: Composition-based stats. Identities = 25/159 (15%), Positives = 61/159 (38%), Gaps = 19/159 (11%) Query: 50 EVHDEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQK----------AFPQGRTLDKD 97 + K L+ ++ + +++ S L L + + Sbjct: 641 VTNSGKFLILDRMLPELKKRGHKVLLFSQMTSMLDILMDYCHLRDFNFSRLDGSMSYSER 700 Query: 98 PCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 + +N + ++ + + G G+NL + ++ + W+ + Q +R Sbjct: 701 EKNMHSFNTDPEVFIFLVSTRAGGLGINLT-AADTVIIYDSDWNPQSDLQAQDRC----- 754 Query: 157 RQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 + G + V VY L+ NTID+ +++R K ++ L++ Sbjct: 755 HRIGQTKPVVVYRLVTANTIDQKIVERAAAKRKLEKLII 793 >gi|316969757|gb|EFV53807.1| domain protein, SNF2 family [Trichinella spiralis] Length = 527 Score = 103 bits (256), Expect = 2e-20, Method: Composition-based stats. Identities = 29/176 (16%), Positives = 68/176 (38%), Gaps = 19/176 (10%) Query: 43 DEEKHWKEVHDEKIKALEVIIE---KANAAPIIVAYHFNSDLARLQ-----KAFPQGRTL 94 + K K+ L+ ++E K +++ F + L + + Sbjct: 320 EANKQEVISSSGKMIVLDRLLEGLFKEGDHKVLIFTQFVEMIHILSFYCEYRNYKFCSLY 379 Query: 95 DK-----DPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIE 149 K + + +G+ + + GLNL + ++ F W+ + Q + Sbjct: 380 GKMSFGERQDEVDRFTKGEASVFLISTRAGNLGLNL-MAADTVILFDSDWNPQCDLQASD 438 Query: 150 RIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIHV 205 R + G + V +Y L+A+ TIDE+++ R ++K +++ + E + + Sbjct: 439 RC-----HRIGQTKPVLIYRLVAKGTIDEIMVDRAQSKRKLENASEKLTEAELLEI 489 >gi|312381365|gb|EFR27128.1| hypothetical protein AND_06360 [Anopheles darlingi] Length = 2541 Score = 103 bits (256), Expect = 2e-20, Method: Composition-based stats. Identities = 30/156 (19%), Positives = 66/156 (42%), Gaps = 19/156 (12%) Query: 55 KIKALEVIIEK--ANAAPIIVAYHFNSDLARLQ---------KAFPQGRTLDKDPCTI-- 101 K++ L+ +++K + +++ L L+ G T + + Sbjct: 1607 KLQTLDRLLKKLKSGGHRVLIFTQMTRMLDVLEAFLNFHGHIYLRLDGTTKVEQRQVLME 1666 Query: 102 QEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGF 161 + N+ ++ + S G G+NL G + ++F+ W+ Q +R + G Sbjct: 1667 RFNNDRRMFVFILSTRSGGVGINLT-GADTVIFYDSDWNPTMDAQAQDRC-----HRIGQ 1720 Query: 162 KRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 R V +Y L+++ TI+E +L++ K + DL + Sbjct: 1721 TRDVHIYRLVSEKTIEENILKKANQKRILGDLAIEG 1756 >gi|315504405|ref|YP_004083292.1| snf2-related protein [Micromonospora sp. L5] gi|315411024|gb|ADU09141.1| SNF2-related protein [Micromonospora sp. L5] Length = 1136 Score = 103 bits (256), Expect = 2e-20, Method: Composition-based stats. Identities = 29/211 (13%), Positives = 69/211 (32%), Gaps = 24/211 (11%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASK--TVKCLQLANGAVYYDEEKHWKEVHDEKIKAL 59 Y ++ ++ + + Q+ N + + K++ L Sbjct: 905 ALYRAVVDDMMAKIESSDGIERRGLVLATMTRLKQVCNHPAQLLHDGSALDGRSGKLERL 964 Query: 60 EVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRT------------LDKDPCTIQEWN 105 + I+++ A ++ + ++ + + RT + + + Sbjct: 965 DEIVDEVLAAEEKALLFTQY-AEFGGMLRGHLSARTGREVLLLHGGVGKAERDAMVTRFQ 1023 Query: 106 EGK-IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA 164 + PL + G GL L N +V WW+ Q +R + G +R Sbjct: 1024 TPQGPPLFVLSLKAGGTGLTLT-AANHVVHVDRWWNPAVEDQATDR-----AFRIGQRRR 1077 Query: 165 VFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 V V + T++E V + K ++ ++ Sbjct: 1078 VQVRKFVCAGTVEEKVAAMIADKRSLARSVV 1108 >gi|302869123|ref|YP_003837760.1| SNF2-like protein [Micromonospora aurantiaca ATCC 27029] gi|302571982|gb|ADL48184.1| SNF2-related protein [Micromonospora aurantiaca ATCC 27029] Length = 1078 Score = 103 bits (256), Expect = 2e-20, Method: Composition-based stats. Identities = 29/211 (13%), Positives = 69/211 (32%), Gaps = 24/211 (11%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASK--TVKCLQLANGAVYYDEEKHWKEVHDEKIKAL 59 Y ++ ++ + + Q+ N + + K++ L Sbjct: 847 ALYRAVVDDMMAKIESSDGIERRGLVLATMTRLKQVCNHPAQLLHDGSALDGRSGKLERL 906 Query: 60 EVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRT------------LDKDPCTIQEWN 105 + I+++ A ++ + ++ + + RT + + + Sbjct: 907 DEIVDEVLAAEEKALLFTQY-AEFGGMLRGHLSARTGREVLLLHGGVGKAERDAMVTRFQ 965 Query: 106 EGK-IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA 164 + PL + G GL L N +V WW+ Q +R + G +R Sbjct: 966 TPQGPPLFVLSLKAGGTGLTLT-AANHVVHVDRWWNPAVEDQATDR-----AFRIGQRRR 1019 Query: 165 VFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 V V + T++E V + K ++ ++ Sbjct: 1020 VQVRKFVCAGTVEEKVAAMIADKRSLARSVV 1050 >gi|114631899|ref|XP_001151339.1| PREDICTED: helicase, lymphoid-specific isoform 11 [Pan troglodytes] Length = 824 Score = 103 bits (256), Expect = 2e-20, Method: Composition-based stats. Identities = 25/159 (15%), Positives = 61/159 (38%), Gaps = 19/159 (11%) Query: 50 EVHDEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQK----------AFPQGRTLDKD 97 + K L+ ++ + +++ S L L + + Sbjct: 542 VTNSGKFLILDRMLPELKKRGHKVLLFSQMTSMLDILMDYCHLRDFNFSRLDGSMSYSER 601 Query: 98 PCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 + +N + ++ + + G G+NL + ++ + W+ + Q +R Sbjct: 602 EKNMHSFNTDPEVFIFLVSTRAGGLGINLT-AADTVIIYDSDWNPQSDLQAQDRC----- 655 Query: 157 RQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 + G + V VY L+ NTID+ +++R K ++ L++ Sbjct: 656 HRIGQTKPVVVYRLVTANTIDQKIVERAAAKRKLEKLII 694 >gi|45382655|ref|NP_990041.1| DNA repair and recombination protein RAD54B [Gallus gallus] gi|51316526|sp|Q9DG67|RA54B_CHICK RecName: Full=DNA repair and recombination protein RAD54B; AltName: Full=RAD54 homolog B gi|9957289|gb|AAG09308.1|AF178529_1 Rad54b [Gallus gallus] Length = 918 Score = 103 bits (256), Expect = 2e-20, Method: Composition-based stats. Identities = 33/177 (18%), Positives = 71/177 (40%), Gaps = 23/177 (12%) Query: 45 EKHWKEVHDEKIKALEVII----EKANAAPIIVAYHFNSDLARLQK----------AFPQ 90 + E+ K++ L ++ E +++ +++ ++ L L + Sbjct: 640 SDTFSEIDSGKLQVLVKLLAAIRELSSSERVVLVSNYTQTLNVLLETCKCYGYSYTRLDG 699 Query: 91 GRTLDKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMI 148 + + + +N P + + G GLNL G + L+ + + W+ Q + Sbjct: 700 NTPVSQRQQIVDSFNSKFSPAFIFLLSSKAGGVGLNL-VGASHLILYDIDWNPATDIQAM 758 Query: 149 ERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK-KETIH 204 R+ + G K V +Y L+ TI+E + QR +K + +++ K E IH Sbjct: 759 ARVW-----RDGQKCTVHIYRLLTTGTIEEKIYQRQISKQDLSGAVVDLSKTSEHIH 810 >gi|320032039|gb|EFW13995.1| helicase SWR1 [Coccidioides posadasii str. Silveira] Length = 1692 Score = 103 bits (256), Expect = 2e-20, Method: Composition-based stats. Identities = 30/166 (18%), Positives = 69/166 (41%), Gaps = 19/166 (11%) Query: 44 EEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAF---------PQGR 92 +K + K++ L+ ++ + A ++ L L++ G Sbjct: 1354 PDKRLLQYDCGKLQQLDKLLRQLQAGGHRALIFTQMTKMLDILEQFLNVHGHRYLRLDGA 1413 Query: 93 TLDKDPCTI--QEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 T + + + N+ +I + S G G+NL G + ++F+ L W+ +Q +R Sbjct: 1414 TKIEQRQMLTERFNNDPRILVFILSSRSGGLGINLT-GADTVIFYDLDWNPAMDKQCQDR 1472 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + G R V +Y +++ TI+ +L++ K + D+++ Sbjct: 1473 C-----HRIGQTRDVHIYRFVSEYTIESNILRKANQKRMLDDVVIQ 1513 >gi|260834097|ref|XP_002612048.1| hypothetical protein BRAFLDRAFT_127252 [Branchiostoma floridae] gi|229297421|gb|EEN68057.1| hypothetical protein BRAFLDRAFT_127252 [Branchiostoma floridae] Length = 3715 Score = 103 bits (256), Expect = 2e-20, Method: Composition-based stats. Identities = 31/210 (14%), Positives = 78/210 (37%), Gaps = 47/210 (22%) Query: 1 MKQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 ++ YH+ +R + + +Q G K++ L+ Sbjct: 2351 LRCYHRVERGMLTQFPDP------------RLVQYDCG----------------KLQRLD 2382 Query: 61 VIIEKA--NAAPIIVAYHFNSDLARLQK----------AFPQGRTLDKDPCTIQEWN-EG 107 ++ + +++ L L++ +++ ++ +N + Sbjct: 2383 KLLRQLKQGQHRVLIFTQMTRMLDVLERFLNYHGHVYLRLDGTTRIEQRQALMERFNADY 2442 Query: 108 KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFV 167 +I + S G G+NL G + ++F+ W+ Q +R + G R V + Sbjct: 2443 RIFVFILSTRSGGIGVNLT-GADTVIFYDSDWNPTMDAQAQDRC-----HRIGQTRDVNI 2496 Query: 168 YYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 Y L+++ T++E +L++ K + D+ + Sbjct: 2497 YRLVSERTVEENILKKANQKRLLVDVSIEG 2526 >gi|154271652|ref|XP_001536679.1| hypothetical protein HCAG_08461 [Ajellomyces capsulatus NAm1] gi|150409349|gb|EDN04799.1| hypothetical protein HCAG_08461 [Ajellomyces capsulatus NAm1] Length = 889 Score = 103 bits (256), Expect = 2e-20, Method: Composition-based stats. Identities = 35/200 (17%), Positives = 73/200 (36%), Gaps = 26/200 (13%) Query: 20 IEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDE------KIKALEVIIEK--ANAAPI 71 IE +A + + Y+ + D K+ L+ +I + I Sbjct: 602 IEKAKTAQLATRLACNSPHNFYWPWGDDPSHIDDTLITSSGKMLLLDRLIPCLMSKGHKI 661 Query: 72 IVAYHFNSDLARLQK-----------AFPQGRTLDKDPCTIQEWN-EGKIPLLFAHPASC 119 ++ F + L LQ + IQ +N + + F + Sbjct: 662 LIFSQFKTQLDLLQDYATSLRGWNCCRIDGAVSQVDRQAQIQAFNTDPDYRIFFLSTRAG 721 Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 G G+NL + ++ F W+ ++ Q R + G + V VY L + T+++ Sbjct: 722 GQGINLT-AADTVILFDSDWNPQQDLQA-----QDRAHRIGQTKPVIVYRLATRGTVEQT 775 Query: 180 VLQRLRTKSTIQDLLLNALK 199 +L++ +K ++ L++ K Sbjct: 776 LLEKADSKRRLEKLVIQKGK 795 >gi|242061806|ref|XP_002452192.1| hypothetical protein SORBIDRAFT_04g021470 [Sorghum bicolor] gi|241932023|gb|EES05168.1| hypothetical protein SORBIDRAFT_04g021470 [Sorghum bicolor] Length = 1024 Score = 103 bits (256), Expect = 2e-20, Method: Composition-based stats. Identities = 42/160 (26%), Positives = 66/160 (41%), Gaps = 21/160 (13%) Query: 42 YDEEKHWKEVHDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQ-----KAFPQGRT- 93 D EK+W E KI AL +E +++ A IV + + L LQ F R Sbjct: 848 IDVEKNWVE--SSKISALLQELEVLRSSGAKSIVFSQWTAFLDLLQIPLSRNNFSFARLD 905 Query: 94 ----LDKDPCTIQEWNEGK-IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMI 148 L + I+E++E K I +L + G G+NL N V WW+ +Q + Sbjct: 906 GTLNLQQREKVIKEFSEDKGILVLLMSLKAGGVGINLTAASNAFVM-DPWWNPAVEEQAV 964 Query: 149 ERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKS 188 RI + G + V + I + T++E + K Sbjct: 965 MRI-----HRIGQTKTVSIRRFIVKGTVEERMEAVQARKQ 999 >gi|322499392|emb|CBZ34465.1| unnamed protein product [Leishmania donovani BPK282A1] Length = 1126 Score = 103 bits (256), Expect = 2e-20, Method: Composition-based stats. Identities = 29/151 (19%), Positives = 57/151 (37%), Gaps = 18/151 (11%) Query: 58 ALEVIIEKANAAPIIVAYHFNSDLARLQKA----------FPQGRTLDKDPCTIQEWNEG 107 L+ + +++ +F L + + K + +N Sbjct: 799 VLDELKRNGERDKLVIVSNFTQTLDIIAALCNSKQIAYFQLDGSTPIKKRQQLVDYFNVP 858 Query: 108 KIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 + + G GLNL G N L+ F W+ Q + R+ + G K+ V Sbjct: 859 GSQEIVFLLSSKAGGVGLNL-IGANRLILFDPDWNPANDAQAMGRVW-----RDGQKKRV 912 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 F+Y L++ TI+E + QR +K + +++ Sbjct: 913 FIYRLLSTGTIEEKIYQRQVSKQGLSANVVD 943 >gi|146087788|ref|XP_001465905.1| DNA repair and recombination protein RAD54 [Leishmania infantum JPCM5] gi|134070006|emb|CAM68336.1| putative DNA repair and recombination protein RAD54 [Leishmania infantum JPCM5] Length = 1126 Score = 103 bits (256), Expect = 2e-20, Method: Composition-based stats. Identities = 29/151 (19%), Positives = 57/151 (37%), Gaps = 18/151 (11%) Query: 58 ALEVIIEKANAAPIIVAYHFNSDLARLQKA----------FPQGRTLDKDPCTIQEWNEG 107 L+ + +++ +F L + + K + +N Sbjct: 799 VLDELKRNGERDKLVIVSNFTQTLDIIAALCNSKQIAYFQLDGSTPIKKRQQLVDYFNVP 858 Query: 108 KIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 + + G GLNL G N L+ F W+ Q + R+ + G K+ V Sbjct: 859 GSQEIVFLLSSKAGGVGLNL-IGANRLILFDPDWNPANDAQAMGRVW-----RDGQKKRV 912 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 F+Y L++ TI+E + QR +K + +++ Sbjct: 913 FIYRLLSTGTIEEKIYQRQVSKQGLSANVVD 943 >gi|74008347|ref|XP_865278.1| PREDICTED: similar to SWI/SNF-related matrix-associated actin-dependent regulator of chromatin a1 isoform a isoform 2 [Canis familiaris] Length = 1070 Score = 103 bits (256), Expect = 2e-20, Method: Composition-based stats. Identities = 44/242 (18%), Positives = 90/242 (37%), Gaps = 52/242 (21%) Query: 1 MKQY---HKFQRELYCDLQGENIEAFNSASKTVK------CLQL---ANGAVYYD----- 43 +K Y K QRE Y + ++I+ NSA K K +QL N +D Sbjct: 413 IKVYLGLSKMQREWYTKILMKDIDVLNSAGKMDKMRLLNILMQLRKCCNHPYLFDGAEPG 472 Query: 44 ---EEKHWKEVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQ---------KAFP 89 + K+ L+ ++ K + +++ L L+ Sbjct: 473 PPYTTDEHIVSNSGKMVVLDKLLAKLKEQGSRVLIFSQMTRLLDILEDYCMWRGYEYCRL 532 Query: 90 QGRTLDKDPCT-------------IQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVF 134 G+T ++ I+ +N + + G G+NL ++++ Sbjct: 533 DGQTPHEEREDKFLEVELLGQREAIEAFNAPNSSKFIFMLSTRAGGLGINL-ASADVVIL 591 Query: 135 FSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 + W+ + Q ++R + G K+ V V+ LI NT++E +++R K + ++ Sbjct: 592 YDSDWNPQVDLQAMDR-----AHRIGQKKPVRVFRLITDNTVEERIVERAEIKLRLDSIV 646 Query: 195 LN 196 + Sbjct: 647 IQ 648 >gi|262203175|ref|YP_003274383.1| SNF2-like protein [Gordonia bronchialis DSM 43247] gi|262086522|gb|ACY22490.1| SNF2-related protein [Gordonia bronchialis DSM 43247] Length = 988 Score = 103 bits (256), Expect = 2e-20, Method: Composition-based stats. Identities = 38/216 (17%), Positives = 69/216 (31%), Gaps = 27/216 (12%) Query: 3 QYHKFQRELYCDLQGENIEAF---NSASKTVKCLQLAN--------GAVYYDEEKHWKEV 51 Y EL L+ + A N + + Q+ N G +H Sbjct: 753 LYRAVIDELMEALRDKQQRALRRRNVLAALTRLKQICNHPAHYLADGTAMAPRGRHRSGK 812 Query: 52 HDEKIKALEVIIEKANAAPIIVAY---------HFNSDL-ARLQKAFPQGRTLDKDPCTI 101 + L +I++ + A + + L + ++D Sbjct: 813 VELLADTLTTLIDEGDRALVFTQFAAFGEMLSGWLTDTLGTEIPLLHGGLGRSERDRMVA 872 Query: 102 QEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGF 161 + P++ A + G GLNL N +V WW+ Q +R + G Sbjct: 873 GFQGDDGPPVMLATLKAGGTGLNLT-AANHVVHVDRWWNPAVEDQATDR-----AYRIGQ 926 Query: 162 KRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + V V+ I TI+E + + K + L + A Sbjct: 927 DQRVDVHRFICVGTIEERIDDMITRKRELSQLTVAA 962 >gi|296220830|ref|XP_002756503.1| PREDICTED: lymphoid-specific helicase isoform 5 [Callithrix jacchus] Length = 739 Score = 103 bits (256), Expect = 2e-20, Method: Composition-based stats. Identities = 25/159 (15%), Positives = 62/159 (38%), Gaps = 19/159 (11%) Query: 50 EVHDEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQK----------AFPQGRTLDKD 97 ++ K L+ ++ + +++ S L L + + Sbjct: 496 VINSGKFLILDRMLPELKKRGHKVLLFSQMTSMLDILMDYCHLRNFNFSRLDGSMSYSER 555 Query: 98 PCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 + +N + ++ + + G G+NL + ++ + W+ + Q +R Sbjct: 556 ERNMHSFNTDPEVFIFLVSTRAGGLGINLT-AADTVIIYDSDWNPQSDLQAQDRC----- 609 Query: 157 RQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 + G + V VY L+ NTID+ +++R K ++ L++ Sbjct: 610 HRIGQTKPVVVYRLVTANTIDQKIVERAAAKRKLEKLII 648 >gi|292495070|sp|P38086|RDH54_YEAST RecName: Full=DNA repair and recombination protein RDH54; AltName: Full=RAD homolog 54; AltName: Full=Recombination factor TID1; AltName: Full=Two hybrid interaction with DMC1 protein 1; Includes: RecName: Full=DNA topoisomerase; Includes: RecName: Full=Putative helicase gi|433837|emb|CAA53930.1| unnamed protein product [Saccharomyces cerevisiae] gi|536326|emb|CAA85017.1| RDH54 [Saccharomyces cerevisiae] Length = 958 Score = 103 bits (256), Expect = 2e-20, Method: Composition-based stats. Identities = 35/162 (21%), Positives = 60/162 (37%), Gaps = 20/162 (12%) Query: 48 WKEVHDEKIKALEVIIE---KANAAPIIVAYHFNSDLARLQKAFPQGR-----------T 93 + ++ K+K L ++E K ++V ++ L ++ Sbjct: 658 SRSLNSGKLKVLMTLLEGIRKGTKEKVVVVSNYTQTLDIIENLMNMAGMSHCRLDGSIPA 717 Query: 94 LDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGV 153 +D I S G GLNL G + L+ F W+ Q + RI Sbjct: 718 KQRDSIVTSFNRNPAIFGFLLSAKSGGVGLNL-VGRSRLILFDNDWNPSVDLQAMSRI-- 774 Query: 154 TRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 + G K+ F+Y L+ IDE +LQR K+++ L Sbjct: 775 ---HRDGQKKPCFIYRLVTTGCIDEKILQRQLMKNSLSQKFL 813 >gi|114631881|ref|XP_001151143.1| PREDICTED: helicase, lymphoid-specific isoform 8 [Pan troglodytes] Length = 806 Score = 103 bits (256), Expect = 2e-20, Method: Composition-based stats. Identities = 25/159 (15%), Positives = 61/159 (38%), Gaps = 19/159 (11%) Query: 50 EVHDEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQK----------AFPQGRTLDKD 97 + K L+ ++ + +++ S L L + + Sbjct: 563 VTNSGKFLILDRMLPELKKRGHKVLLFSQMTSMLDILMDYCHLRDFNFSRLDGSMSYSER 622 Query: 98 PCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 + +N + ++ + + G G+NL + ++ + W+ + Q +R Sbjct: 623 EKNMHSFNTDPEVFIFLVSTRAGGLGINLT-AADTVIIYDSDWNPQSDLQAQDRC----- 676 Query: 157 RQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 + G + V VY L+ NTID+ +++R K ++ L++ Sbjct: 677 HRIGQTKPVVVYRLVTANTIDQKIVERAAAKRKLEKLII 715 >gi|226312228|ref|YP_002772122.1| hypothetical protein BBR47_26410 [Brevibacillus brevis NBRC 100599] gi|226095176|dbj|BAH43618.1| conserved hypothetical protein [Brevibacillus brevis NBRC 100599] Length = 952 Score = 103 bits (256), Expect = 2e-20, Method: Composition-based stats. Identities = 34/217 (15%), Positives = 75/217 (34%), Gaps = 29/217 (13%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTV--KCLQLANGA--VYYDEEKHWKEVHDEKIK 57 Y ++++ ++ + T + QL + + + + K++ Sbjct: 712 ALYETAIQDMFDRMEKASPMERRGLILTTLTRLKQLCDHPALILNEIATTDEAGRSHKLE 771 Query: 58 ALEVIIEKANAAPI--IVAYHFNSDLARLQK----------AFPQGRTLD-KDPCTIQEW 104 L +++ ++ + LQ+ F G T K I + Sbjct: 772 RLLELVDDIRQKKERCLIFTQYIQMGNMLQRVLTREGYGPVYFLNGATKKEKRDEMIARF 831 Query: 105 NEGKIP------LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQ 158 + +P + + G GLNL N ++ WW+ Q +R + Sbjct: 832 QDPTLPDDERGAIFILSLRAGGTGLNLTE-ANHVIHVDRWWNPAVENQATDR-----AHR 885 Query: 159 AGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 G +R V VY I+ TI+E + + + K ++ ++ Sbjct: 886 IGQQRDVHVYKFISLGTIEERIDEMMERKLSLSQQIV 922 >gi|42407259|dbj|BAD10846.1| lymphoid specific helicase variant3 [Homo sapiens] gi|119570413|gb|EAW50028.1| helicase, lymphoid-specific, isoform CRA_c [Homo sapiens] Length = 806 Score = 103 bits (256), Expect = 2e-20, Method: Composition-based stats. Identities = 25/159 (15%), Positives = 61/159 (38%), Gaps = 19/159 (11%) Query: 50 EVHDEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQK----------AFPQGRTLDKD 97 + K L+ ++ + +++ S L L + + Sbjct: 563 VTNSGKFLILDRMLPELKKRGHKVLLFSQMTSMLDILMDYCHLRDFNFSRLDGSMSYSER 622 Query: 98 PCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 + +N + ++ + + G G+NL + ++ + W+ + Q +R Sbjct: 623 EKNMHSFNTDPEVFIFLVSTRAGGLGINLT-AADTVIIYDSDWNPQSDLQAQDRC----- 676 Query: 157 RQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 + G + V VY L+ NTID+ +++R K ++ L++ Sbjct: 677 HRIGQTKPVVVYRLVTANTIDQKIVERAAAKRKLEKLII 715 >gi|170117369|ref|XP_001889872.1| SNF2 family DNA-dependent ATPase [Laccaria bicolor S238N-H82] gi|164635212|gb|EDQ99523.1| SNF2 family DNA-dependent ATPase [Laccaria bicolor S238N-H82] Length = 672 Score = 103 bits (256), Expect = 2e-20, Method: Composition-based stats. Identities = 41/207 (19%), Positives = 84/207 (40%), Gaps = 21/207 (10%) Query: 1 MKQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 +K+ +R DL E++ A + C + Y +E + + K++ L Sbjct: 429 LKEPDFKKRGALFDLVKEDMSVMTDAELQIFCASYKSTRKYLQDENCY--LDAGKVQTLL 486 Query: 61 VIIE--KANAAPIIVAYHFNSDLA---------RLQKAFPQGRT-LDKDPCTIQEWNEGK 108 ++ +++ F L +++ G T +D + E+ E + Sbjct: 487 KLLSTYDREGRKVLIFSQFTQILDILQAVLNNNKIKYLILTGSTPVDVRQTLVDEFTEDE 546 Query: 109 -IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFV 167 IP+ + G G+NL +++V F ++ +R R + G KR V V Sbjct: 547 TIPVFLLSTKAGGMGINLT-AASVVVMFDQDFNPH-----NDRQAQDRAYRIGQKRDVDV 600 Query: 168 YYLIAQNTIDELVLQRLRTKSTIQDLL 194 LI++ TI+E +L+ +TK + + + Sbjct: 601 VKLISRGTIEEDMLKLGQTKLALDEAV 627 >gi|331227507|ref|XP_003326422.1| ISWI chromatin-remodeling complex ATPase ISW2 [Puccinia graminis f. sp. tritici CRL 75-36-700-3] gi|309305412|gb|EFP82003.1| ISWI chromatin-remodeling complex ATPase ISW2 [Puccinia graminis f. sp. tritici CRL 75-36-700-3] Length = 939 Score = 103 bits (256), Expect = 2e-20, Method: Composition-based stats. Identities = 39/176 (22%), Positives = 68/176 (38%), Gaps = 21/176 (11%) Query: 43 DEEKHWKEVHDEKIKALEVI---IEKANAAPIIVAYHFNSDLARLQKAFPQGR------- 92 D + K+ LE I+ I++ +F L ++K + R Sbjct: 686 DPRAPARPELSGKMTVLERFLHKIKTETTDKIVLISNFTQTLDVMEKMCRERRWGNLRLD 745 Query: 93 ---TLDKDPCTIQEWN--EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQM 147 + K + +N EGK + + G G+NL G N L+ F W+ QQ Sbjct: 746 GTMQITKRQKLVDRFNDPEGKEFIFLLSSKAGGCGINL-IGANRLILFDPDWNPASDQQA 804 Query: 148 IERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETI 203 + R+ + G K+ FVY I +++E V QR K + +++ + E Sbjct: 805 LARVW-----RDGQKKNCFVYRFILTGSVEEKVFQRQSQKMKLSASVVDEQEDEAR 855 >gi|320581787|gb|EFW96006.1| Putative DNA helicase INO80 [Pichia angusta DL-1] Length = 1280 Score = 103 bits (256), Expect = 2e-20, Method: Composition-based stats. Identities = 25/161 (15%), Positives = 62/161 (38%), Gaps = 19/161 (11%) Query: 50 EVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQK----------AFPQGRTLDKD 97 + K+ L+ ++ N ++ + + +++ L Sbjct: 1091 VIESGKLAKLDEMLVDLKKNGHKCLIYFQMTKMMDLMEEFLTYRQYKYIRLDGSSKLSDR 1150 Query: 98 PCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 + +W + ++ + + G G+NL + ++F+ W+ Q ++R Sbjct: 1151 RDLVHDWQTKPELFIFLLSTRAGGLGINLT-AADTVIFYDSDWNPTIDSQAMDR-----A 1204 Query: 157 RQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + G R V VY L+ + TI+E + R + K +Q +++ Sbjct: 1205 HRLGQTRQVTVYRLLVRGTIEERMRDRAKQKEHVQQVVMEG 1245 >gi|58267652|ref|XP_570982.1| helicase [Cryptococcus neoformans var. neoformans JEC21] gi|57227216|gb|AAW43675.1| helicase, putative [Cryptococcus neoformans var. neoformans JEC21] Length = 1848 Score = 103 bits (256), Expect = 2e-20, Method: Composition-based stats. Identities = 47/246 (19%), Positives = 89/246 (36%), Gaps = 60/246 (24%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASK---------TVKCLQLANGA--VYYDEEKHWKE 50 + Y +F R + G IE SASK +L N V E + +KE Sbjct: 1543 QLYEEFSRSKAAEEAGMEIE--TSASKEGQGHVFQSLQYLRKLCNHPALVLDGEPQRFKE 1600 Query: 51 VHDE--------------KIKALEVII-------------EKANAAPIIVAYHFNSDLAR 83 + + K++AL+ ++ + +++ L Sbjct: 1601 IQKKIGGGPELHDLSHAPKMEALKQLLQDCGIGLPVDKLADDVTTHRVLIFCQLRPMLDI 1660 Query: 84 LQK-------------AFPQGRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGG 129 ++K K +Q +N + +I +L + G GLNL G Sbjct: 1661 IEKDLFGTHMPTVSYMRLDGSTDPRKRHAIVQTFNADPRIDVLLLTTSVGGLGLNLT-GA 1719 Query: 130 NILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKST 189 + ++F W+ + Q ++R + G ++ V VY LI + T++E ++ R K Sbjct: 1720 DTVIFVDHDWNPMKDLQAMDR-----AHRLGQRKVVNVYRLITRGTLEEKIMGLQRFKLN 1774 Query: 190 IQDLLL 195 I ++ Sbjct: 1775 IASSVV 1780 >gi|303315865|ref|XP_003067937.1| SNF2 family N-terminal domain containing protein [Coccidioides posadasii C735 delta SOWgp] gi|240107613|gb|EER25792.1| SNF2 family N-terminal domain containing protein [Coccidioides posadasii C735 delta SOWgp] Length = 1684 Score = 103 bits (256), Expect = 2e-20, Method: Composition-based stats. Identities = 30/166 (18%), Positives = 69/166 (41%), Gaps = 19/166 (11%) Query: 44 EEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAF---------PQGR 92 +K + K++ L+ ++ + A ++ L L++ G Sbjct: 1346 PDKRLLQYDCGKLQQLDKLLRQLQAGGHRALIFTQMTKMLDILEQFLNVHGHRYLRLDGA 1405 Query: 93 TLDKDPCTI--QEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 T + + + N+ +I + S G G+NL G + ++F+ L W+ +Q +R Sbjct: 1406 TKIEQRQMLTERFNNDPRILVFILSSRSGGLGINLT-GADTVIFYDLDWNPAMDKQCQDR 1464 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + G R V +Y +++ TI+ +L++ K + D+++ Sbjct: 1465 C-----HRIGQTRDVHIYRFVSEYTIESNILRKANQKRMLDDVVIQ 1505 >gi|327350928|gb|EGE79785.1| lymphocyte-specific helicase [Ajellomyces dermatitidis ATCC 18188] Length = 893 Score = 103 bits (256), Expect = 2e-20, Method: Composition-based stats. Identities = 32/175 (18%), Positives = 65/175 (37%), Gaps = 23/175 (13%) Query: 42 YDEEKHWKE---VHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQK---------- 86 D+ H E K+ L+ +I + I++ F + L LQ Sbjct: 631 DDDPSHIDESLITSSGKMLLLDRLIPCLMSKGHKILIFSQFKTQLDLLQDYATYLRGWNC 690 Query: 87 -AFPQGRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEH 144 + IQ +N + + G G+NL + ++ F W+ ++ Sbjct: 691 CRIDGAVSQVDRQAQIQAFNTNQDYRIFLLSTRAGGQGINLT-AADTVILFDSDWNPQQD 749 Query: 145 QQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 Q R + G + V VY L + T+++ +L++ +K ++ L++ K Sbjct: 750 LQA-----QDRAHRIGQTKPVIVYRLATRGTVEQTLLEKADSKRRLEKLVIQKGK 799 >gi|145339485|ref|NP_190996.2| RGD3 (ROOT GROWTH DEFECTIVE 3); ATP binding / DNA binding / binding / helicase/ nucleic acid binding [Arabidopsis thaliana] Length = 2038 Score = 103 bits (256), Expect = 2e-20, Method: Composition-based stats. Identities = 40/195 (20%), Positives = 76/195 (38%), Gaps = 36/195 (18%) Query: 32 CLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEK---------ANA------APIIVAYH 76 + NG E H + H K+ AL+ I+E+ ++ +++ Sbjct: 1773 LAAMINGCSDIITELHKVQ-HSPKLVALQEILEECGIGSDASSSDGTLSVGQHRVLIFAQ 1831 Query: 77 FNSDLARLQK-------------AFPQGRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHG 122 + L ++K +K ++ +N + I +L G G Sbjct: 1832 HKALLDIIEKDLFQAHMKSVTYMRLDGSVVPEKRFEIVKAFNSDPTIDVLLLTTHVGGLG 1891 Query: 123 LNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQ 182 LNL + LVF W+ Q ++R + G KR V V+ LI + T++E V+ Sbjct: 1892 LNLT-SADTLVFMEHDWNPMRDHQAMDR-----AHRLGQKRVVNVHRLIMRGTLEEKVMS 1945 Query: 183 RLRTKSTIQDLLLNA 197 + K ++ + ++NA Sbjct: 1946 LQKFKVSVANTVINA 1960 >gi|119177637|ref|XP_001240571.1| hypothetical protein CIMG_07734 [Coccidioides immitis RS] Length = 1665 Score = 103 bits (256), Expect = 2e-20, Method: Composition-based stats. Identities = 30/166 (18%), Positives = 69/166 (41%), Gaps = 19/166 (11%) Query: 44 EEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAF---------PQGR 92 +K + K++ L+ ++ + A ++ L L++ G Sbjct: 1327 PDKRLLQYDCGKLQQLDKLLRQLQAGGHRALIFTQMTKMLDILEQFLNVHGHRYLRLDGA 1386 Query: 93 TLDKDPCTI--QEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 T + + + N+ +I + S G G+NL G + ++F+ L W+ +Q +R Sbjct: 1387 TKIEQRQMLTERFNNDPRILVFILSSRSGGLGINLT-GADTVIFYDLDWNPAMDKQCQDR 1445 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + G R V +Y +++ TI+ +L++ K + D+++ Sbjct: 1446 C-----HRIGQTRDVHIYRFVSEYTIESNILRKANQKRMLDDVVIQ 1486 >gi|50414862|gb|AAH77794.1| HELLS protein [Xenopus laevis] Length = 756 Score = 103 bits (256), Expect = 2e-20, Method: Composition-based stats. Identities = 25/157 (15%), Positives = 58/157 (36%), Gaps = 19/157 (12%) Query: 52 HDEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQK----------AFPQGRTLDKDPC 99 K L+ ++ + +++ L L + Sbjct: 600 SSGKFLLLDRLLPEMKKRGHKVLIFSQMTMMLDILMDYCYYKKFNFCRLDGSMSYTDREE 659 Query: 100 TIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQ 158 ++ +N + + + + G G+NL + ++ + W+ + Q +R + Sbjct: 660 NMRSFNTDPDVFIFLVSTRAGGLGINLT-AADTVIIYDSDWNPQADLQAQDRC-----HR 713 Query: 159 AGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 G R V VY L+ NTID+ +++R K ++ L++ Sbjct: 714 IGQTRPVVVYRLVTANTIDQKIVERAAAKRKLEKLVI 750 >gi|49257014|dbj|BAD24805.1| lymphoid specific helicase variant10 [Homo sapiens] Length = 782 Score = 103 bits (256), Expect = 2e-20, Method: Composition-based stats. Identities = 25/159 (15%), Positives = 61/159 (38%), Gaps = 19/159 (11%) Query: 50 EVHDEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQK----------AFPQGRTLDKD 97 + K L+ ++ + +++ S L L + + Sbjct: 595 VTNSGKFLILDRMLPELKKRGHKVLLFSQMTSMLDILMDYCHLRDFNFSRLDGSMSYSER 654 Query: 98 PCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 + +N + ++ + + G G+NL + ++ + W+ + Q +R Sbjct: 655 EKNMHSFNTDPEVFIFLVSTRAGGLGINLT-AADTVIIYDSDWNPQSDLQAQDRC----- 708 Query: 157 RQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 + G + V VY L+ NTID+ +++R K ++ L++ Sbjct: 709 HRIGQTKPVVVYRLVTANTIDQKIVERAAAKRKLEKLII 747 >gi|260809115|ref|XP_002599352.1| hypothetical protein BRAFLDRAFT_64295 [Branchiostoma floridae] gi|229284629|gb|EEN55364.1| hypothetical protein BRAFLDRAFT_64295 [Branchiostoma floridae] Length = 996 Score = 103 bits (256), Expect = 2e-20, Method: Composition-based stats. Identities = 36/173 (20%), Positives = 63/173 (36%), Gaps = 30/173 (17%) Query: 26 ASKTVKCLQLA--NGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLAR 83 ++K QL G D + + D + +V S L Sbjct: 777 SAKLTALRQLLLDCGIGVPDSGQTSDLLSDAVV----------GQHRALVFCQLKSMLDI 826 Query: 84 LQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEE 143 L+K + N+ I LL G GLNL G + ++F W+ Sbjct: 827 LEKDLLK------------FNNDPSIDLLLLTTHVGGLGLNLT-GADTVIFVEHDWNPMR 873 Query: 144 HQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 Q ++R + G K+ V VY L+ Q T++E ++ + K I + +++ Sbjct: 874 DLQAMDR-----AHRLGQKKVVNVYRLVTQGTLEEKIMGLQKFKLNIANTVIS 921 >gi|9956001|gb|AAG01987.1| similar to Mus musculus lymphocyte specific helicase mRNA with GenBank Accession Number U25691.1 [Homo sapiens] gi|21410637|gb|AAH31004.1| HELLS protein [Homo sapiens] gi|21411296|gb|AAH30963.1| HELLS protein [Homo sapiens] Length = 348 Score = 103 bits (256), Expect = 2e-20, Method: Composition-based stats. Identities = 25/159 (15%), Positives = 61/159 (38%), Gaps = 19/159 (11%) Query: 50 EVHDEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQK----------AFPQGRTLDKD 97 + K L+ ++ + +++ S L L + + Sbjct: 105 VTNSGKFLILDRMLPELKKRGHKVLLFSQMTSMLDILMDYCHLRDFNFSRLDGSMSYSER 164 Query: 98 PCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 + +N + ++ + + G G+NL + ++ + W+ + Q +R Sbjct: 165 EKNMHSFNTDPEVFIFLVSTRAGGLGINLT-AADTVIIYDSDWNPQSDLQAQDRC----- 218 Query: 157 RQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 + G + V VY L+ NTID+ +++R K ++ L++ Sbjct: 219 HRIGQTKPVVVYRLVTANTIDQKIVERAAAKRKLEKLII 257 >gi|134112447|ref|XP_775199.1| hypothetical protein CNBE4720 [Cryptococcus neoformans var. neoformans B-3501A] gi|50257851|gb|EAL20552.1| hypothetical protein CNBE4720 [Cryptococcus neoformans var. neoformans B-3501A] Length = 1848 Score = 103 bits (256), Expect = 2e-20, Method: Composition-based stats. Identities = 47/246 (19%), Positives = 89/246 (36%), Gaps = 60/246 (24%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASK---------TVKCLQLANGA--VYYDEEKHWKE 50 + Y +F R + G IE SASK +L N V E + +KE Sbjct: 1543 QLYEEFSRSKAAEEAGMEIE--TSASKEGQGHVFQSLQYLRKLCNHPALVLDGEPQRFKE 1600 Query: 51 VHDE--------------KIKALEVII-------------EKANAAPIIVAYHFNSDLAR 83 + + K++AL+ ++ + +++ L Sbjct: 1601 IQKKIGGGPELHDLSHAPKMEALKQLLQDCGIGLPVDKLADDVTTHRVLIFCQLRPMLDI 1660 Query: 84 LQK-------------AFPQGRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGG 129 ++K K +Q +N + +I +L + G GLNL G Sbjct: 1661 IEKDLFGTHMPTVSYMRLDGSTDPRKRHAIVQTFNADPRIDVLLLTTSVGGLGLNLT-GA 1719 Query: 130 NILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKST 189 + ++F W+ + Q ++R + G ++ V VY LI + T++E ++ R K Sbjct: 1720 DTVIFVDHDWNPMKDLQAMDR-----AHRLGQRKVVNVYRLITRGTLEEKIMGLQRFKLN 1774 Query: 190 IQDLLL 195 I ++ Sbjct: 1775 IASSVV 1780 >gi|297687067|ref|XP_002821047.1| PREDICTED: LOW QUALITY PROTEIN: lymphoid-specific helicase-like [Pongo abelii] Length = 890 Score = 102 bits (255), Expect = 2e-20, Method: Composition-based stats. Identities = 25/159 (15%), Positives = 61/159 (38%), Gaps = 19/159 (11%) Query: 50 EVHDEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQK----------AFPQGRTLDKD 97 + K L+ ++ + +++ S L L + + Sbjct: 647 VTNSGKFLILDRMLPELKKRGHKVLLFSQMTSMLDILMDYCHLRDFNFSRLDGSMSYSER 706 Query: 98 PCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 + +N + ++ + + G G+NL + ++ + W+ + Q +R Sbjct: 707 EKNMHSFNTDPEVFIFLVSTRAGGLGINLT-AADTVIIYDSDWNPQSDLQAQDRC----- 760 Query: 157 RQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 + G + V VY L+ NTID+ +++R K ++ L++ Sbjct: 761 HRIGQTKPVVVYRLVTANTIDQKIVERAAAKRKLEKLII 799 >gi|196010760|ref|XP_002115244.1| hypothetical protein TRIADDRAFT_59226 [Trichoplax adhaerens] gi|190582015|gb|EDV22089.1| hypothetical protein TRIADDRAFT_59226 [Trichoplax adhaerens] Length = 2314 Score = 102 bits (255), Expect = 2e-20, Method: Composition-based stats. Identities = 31/160 (19%), Positives = 65/160 (40%), Gaps = 19/160 (11%) Query: 44 EEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQK----------AFPQG 91 ++ + K++AL++++ A +++ L L+K Sbjct: 1326 PDRRLIQYDCGKLQALDILLHDLKAKGHRVLIFTQMTKMLDILEKFLNFHGHVYLRLDGA 1385 Query: 92 RTLDKDPCTIQEWNEGK-IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 +++ + +N K + S G G+NL G + +VF+ W+ Q +R Sbjct: 1386 TPVERRQMLTERFNNDKRVFCFVLSTRSGGLGVNLT-GADTVVFYDSDWNPTMDAQAQDR 1444 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 + G R V +Y LI++ TI+E +L++ K + Sbjct: 1445 C-----HRIGQTRDVHIYRLISEFTIEENILKKANQKRLL 1479 >gi|197691963|dbj|BAG70033.1| homolog of human BTAF1 [Arabidopsis thaliana] Length = 2045 Score = 102 bits (255), Expect = 2e-20, Method: Composition-based stats. Identities = 40/195 (20%), Positives = 76/195 (38%), Gaps = 36/195 (18%) Query: 32 CLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEK---------ANA------APIIVAYH 76 + NG E H + H K+ AL+ I+E+ ++ +++ Sbjct: 1780 LAAMINGCSDIITELHKVQ-HSPKLVALQEILEECGIGSDASSSDGTLSVGQHRVLIFAQ 1838 Query: 77 FNSDLARLQK-------------AFPQGRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHG 122 + L ++K +K ++ +N + I +L G G Sbjct: 1839 HKALLDIIEKDLFQAHMKSVTYMRLDGSVVPEKRFEIVKAFNSDPTIDVLLLTTHVGGLG 1898 Query: 123 LNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQ 182 LNL + LVF W+ Q ++R + G KR V V+ LI + T++E V+ Sbjct: 1899 LNLT-SADTLVFMEHDWNPMRDHQAMDR-----AHRLGQKRVVNVHRLIMRGTLEEKVMS 1952 Query: 183 RLRTKSTIQDLLLNA 197 + K ++ + ++NA Sbjct: 1953 LQKFKVSVANTVINA 1967 >gi|114631879|ref|XP_001151268.1| PREDICTED: helicase, lymphoid-specific isoform 10 [Pan troglodytes] Length = 838 Score = 102 bits (255), Expect = 2e-20, Method: Composition-based stats. Identities = 25/159 (15%), Positives = 61/159 (38%), Gaps = 19/159 (11%) Query: 50 EVHDEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQK----------AFPQGRTLDKD 97 + K L+ ++ + +++ S L L + + Sbjct: 595 VTNSGKFLILDRMLPELKKRGHKVLLFSQMTSMLDILMDYCHLRDFNFSRLDGSMSYSER 654 Query: 98 PCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 + +N + ++ + + G G+NL + ++ + W+ + Q +R Sbjct: 655 EKNMHSFNTDPEVFIFLVSTRAGGLGINLT-AADTVIIYDSDWNPQSDLQAQDRC----- 708 Query: 157 RQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 + G + V VY L+ NTID+ +++R K ++ L++ Sbjct: 709 HRIGQTKPVVVYRLVTANTIDQKIVERAAAKRKLEKLII 747 >gi|21914927|ref|NP_060533.2| lymphoid-specific helicase [Homo sapiens] gi|74761670|sp|Q9NRZ9|HELLS_HUMAN RecName: Full=Lymphoid-specific helicase; AltName: Full=Proliferation-associated SNF2-like protein; AltName: Full=SWI/SNF2-related matrix-associated actin-dependent regulator of chromatin subfamily A member 6 gi|8980660|gb|AAF82262.1| proliferation-associated SNF2-like protein [Homo sapiens] gi|17384047|emb|CAD13191.1| helicase, lymphoid-specific [Homo sapiens] gi|119570420|gb|EAW50035.1| helicase, lymphoid-specific, isoform CRA_j [Homo sapiens] gi|148922411|gb|AAI46309.1| Helicase, lymphoid-specific [synthetic construct] gi|189069422|dbj|BAG37088.1| unnamed protein product [Homo sapiens] gi|261857602|dbj|BAI45323.1| helicase, lymphoid-specific [synthetic construct] Length = 838 Score = 102 bits (255), Expect = 2e-20, Method: Composition-based stats. Identities = 25/159 (15%), Positives = 61/159 (38%), Gaps = 19/159 (11%) Query: 50 EVHDEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQK----------AFPQGRTLDKD 97 + K L+ ++ + +++ S L L + + Sbjct: 595 VTNSGKFLILDRMLPELKKRGHKVLLFSQMTSMLDILMDYCHLRDFNFSRLDGSMSYSER 654 Query: 98 PCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 + +N + ++ + + G G+NL + ++ + W+ + Q +R Sbjct: 655 EKNMHSFNTDPEVFIFLVSTRAGGLGINLT-AADTVIIYDSDWNPQSDLQAQDRC----- 708 Query: 157 RQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 + G + V VY L+ NTID+ +++R K ++ L++ Sbjct: 709 HRIGQTKPVVVYRLVTANTIDQKIVERAAAKRKLEKLII 747 >gi|298711307|emb|CBJ26552.1| DNA repair and recombination protein RAD54 homolog [Ectocarpus siliculosus] Length = 1510 Score = 102 bits (255), Expect = 2e-20, Method: Composition-based stats. Identities = 39/157 (24%), Positives = 68/157 (43%), Gaps = 21/157 (13%) Query: 53 DEKIKALEVIIEKA---NAAPIIVAYHFNSDLARL-----QKAFPQGRT-----LDKDPC 99 K++ L ++ + I+V +F S L + + ++P R + K Sbjct: 563 SGKMETLFRLMREMRNTGDDRIVVVSNFTSSLDLIGSMCRENSWPFVRLDGSTGVSKRQK 622 Query: 100 TIQEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 + +NE + + G GLNL GGN LV F W+ +Q R+ Sbjct: 623 MVNAFNEPGPQSFAFLLSSKAGGCGLNL-IGGNRLVLFDPDWNPAVDKQAAARVW----- 676 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 + G K+ FVY ++ TI+E V QR +K +Q+++ Sbjct: 677 RDGQKKRCFVYRFVSTGTIEEKVFQRQLSKEGLQNIV 713 >gi|168066598|ref|XP_001785222.1| SWR1 complex protein, SNF2 family DNA-dependent ATPase [Physcomitrella patens subsp. patens] gi|162663184|gb|EDQ49963.1| SWR1 complex protein, SNF2 family DNA-dependent ATPase [Physcomitrella patens subsp. patens] Length = 1727 Score = 102 bits (255), Expect = 2e-20, Method: Composition-based stats. Identities = 35/167 (20%), Positives = 70/167 (41%), Gaps = 19/167 (11%) Query: 44 EEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQ---------KAFPQGR 92 ++ + K++ L V++ + + ++ L L+ G Sbjct: 1017 PDRRLLQFDCGKLQELAVLLRRLKSQGHRALIFTQMTKMLDVLESFINLYGYTYMRLDGS 1076 Query: 93 TLDKDPCTI-QEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 T + + Q +N KI L S G G+NL G + ++F+ W+ Q +R Sbjct: 1077 TKPEQRQILMQRFNTNPKIFLFILSTRSGGVGINL-VGADTVIFYDSDWNPAMDLQAQDR 1135 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + G R V +Y LI+++TI+E +L++ K + DL++ + Sbjct: 1136 C-----HRIGQTREVHIYRLISESTIEENILKKANQKRILDDLVIQS 1177 >gi|109090016|ref|XP_001095267.1| PREDICTED: lymphoid-specific helicase isoform 9 [Macaca mulatta] Length = 707 Score = 102 bits (255), Expect = 2e-20, Method: Composition-based stats. Identities = 24/159 (15%), Positives = 61/159 (38%), Gaps = 19/159 (11%) Query: 50 EVHDEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQK----------AFPQGRTLDKD 97 + K L+ ++ + +++ S L L + + Sbjct: 464 VTNSGKFLILDRMLPELKKRGHKVLLFSQMTSMLDILMDYCHLRDFNFSRLDGSMSYSER 523 Query: 98 PCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 + +N + ++ + + G G+NL + ++ + W+ + Q +R Sbjct: 524 EKNMHSFNMDPEVFIFLVSTRAGGLGINLT-AADTVIIYDSDWNPQSDLQAQDRC----- 577 Query: 157 RQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 + G + V VY L+ NT+D+ +++R K ++ L++ Sbjct: 578 HRIGQTKPVVVYRLVTANTVDQKIVERAAAKRKLEKLII 616 >gi|317968221|ref|ZP_07969611.1| SNF2 family DNA/RNA helicase [Synechococcus sp. CB0205] Length = 1039 Score = 102 bits (255), Expect = 2e-20, Method: Composition-based stats. Identities = 32/194 (16%), Positives = 65/194 (33%), Gaps = 30/194 (15%) Query: 26 ASKTVKCLQLANG---AVYYDEEKHWKEVH------DEKIKALEVIIEK--ANAAPIIVA 74 + K Q+ N A+ D K++ LE I+E+ ++ Sbjct: 828 LALLTKLKQICNHPALALKQDPADADASFFKEFAARSAKVQRLEEILEEVMEAGDRALLF 887 Query: 75 YHFNSDLARLQKA----------FPQGRTLDKDPC-TIQEWNEG--KIPLLFAHPASCGH 121 F L+ F G T + + + + L + G Sbjct: 888 TQFAEWGHLLKAHLEHKWRQEVPFLYGSTSKTERQAMVDRFQDDPRGPQLFLLSLKAGGV 947 Query: 122 GLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVL 181 GLNL + + WW+ Q +R + G + V V+ I +++E + Sbjct: 948 GLNLTRASH-VFHIDRWWNPAVENQATDR-----AYRIGQQNRVMVHKFITSGSVEERID 1001 Query: 182 QRLRTKSTIQDLLL 195 + ++ KS + + ++ Sbjct: 1002 RMIKEKSKLAEDIV 1015 >gi|254573876|ref|XP_002494047.1| Protein that recognizes and binds damaged DNA in an ATP-dependent manner (with Rad7p) [Pichia pastoris GS115] gi|238033846|emb|CAY71868.1| Protein that recognizes and binds damaged DNA in an ATP-dependent manner (with Rad7p) [Pichia pastoris GS115] Length = 728 Score = 102 bits (255), Expect = 2e-20, Method: Composition-based stats. Identities = 35/155 (22%), Positives = 69/155 (44%), Gaps = 17/155 (10%) Query: 53 DEKIKALEVIIEKANAAPIIVAYHFNSDLARLQ--------KAFPQGRTLDK--DPCTIQ 102 K + L I+++ A I+ F LA L+ K T+ + T++ Sbjct: 550 SAKSERLLEILKRDPARKTIIFSQFTKLLATLKPFLTKNGFKCVLYEGTMTRAMRDTTLK 609 Query: 103 EWNE-GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGF 161 E+NE + +L GLNL N +V + WW+ + Q I+R+ + G Sbjct: 610 EFNENPETTVLLCSLKCGAIGLNLTI-ANRVVIYDPWWNPQVEDQAIDRV-----YRFGQ 663 Query: 162 KRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + V VY LI +++++E +++ K + + +++ Sbjct: 664 TKEVDVYRLIIKDSVEENIVRLQEKKRQVAEAVVD 698 >gi|118089929|ref|XP_001234486.1| PREDICTED: SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5 [Gallus gallus] Length = 1198 Score = 102 bits (255), Expect = 2e-20, Method: Composition-based stats. Identities = 43/230 (18%), Positives = 88/230 (38%), Gaps = 40/230 (17%) Query: 1 MKQY---HKFQRELYCDLQGENIEAFNSASKTVK------CLQL--ANGAVYYDEEKHW- 48 +K Y K QRE Y + ++I+ NSA K K +QL Y + Sbjct: 555 VKIYVGLSKMQREWYTRILMKDIDILNSAGKLDKMRLLNILMQLRKCCNHPYLFDGAEPG 614 Query: 49 --------KEVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQ---------KAFP 89 + K+ L+ ++ K + +++ L L+ Sbjct: 615 PPYTTDMHLVTNSGKMVVLDKLLPKLKEQGSRVLIFSQMTRVLDILEDYCMWRNYEYCRL 674 Query: 90 QGRTL-DKDPCTIQEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 G+T D+ +I +NE + + G G+NL ++++ + W+ + Q Sbjct: 675 DGQTPHDERQASINAYNEPGSSKFVFMLSTRAGGLGINL-ATADVVILYDSDWNPQVDLQ 733 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 ++R + G + V V+ I NT++E +++R K + +++ Sbjct: 734 AMDR-----AHRIGQTKTVRVFRFITDNTVEERIVERAEMKLRLDSIVIQ 778 >gi|301604374|ref|XP_002931866.1| PREDICTED: probable global transcription activator SNF2L1 [Xenopus (Silurana) tropicalis] Length = 1029 Score = 102 bits (255), Expect = 2e-20, Method: Composition-based stats. Identities = 42/222 (18%), Positives = 87/222 (39%), Gaps = 37/222 (16%) Query: 6 KFQRELYCDLQGENIEAFNSASKTVK------CLQL---ANGAVYYD--------EEKHW 48 K QRE Y + ++I+ NSA K K +QL N +D Sbjct: 393 KMQREWYTKILMKDIDILNSAGKMDKMRLLNILMQLRKCCNHPYLFDGAEPGPPYTTDTH 452 Query: 49 KEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQ---------KAFPQGRTL-DK 96 + K+ L+ ++ K + +++ L L+ G+T ++ Sbjct: 453 LVYNSGKMVVLDKLLPKFKEQGSRVLIFSQMTRVLDILEDYCMWRGYEYCRLDGQTPHEQ 512 Query: 97 DPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 I+ +N + + G G+NL ++++ + W+ + Q ++R Sbjct: 513 REAAIETFNSPNSSKFIFMLSTRAGGLGINL-ATADVVILYDSDWNPQVDLQAMDR---- 567 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + G K+ V V+ LI NT++E +++R K + +++ Sbjct: 568 -AHRIGQKKTVRVFRLITDNTVEERIVERAEIKLRLDSIVIQ 608 >gi|114631895|ref|XP_001151399.1| PREDICTED: helicase, lymphoid-specific isoform 12 [Pan troglodytes] Length = 861 Score = 102 bits (255), Expect = 2e-20, Method: Composition-based stats. Identities = 25/159 (15%), Positives = 61/159 (38%), Gaps = 19/159 (11%) Query: 50 EVHDEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQK----------AFPQGRTLDKD 97 + K L+ ++ + +++ S L L + + Sbjct: 579 VTNSGKFLILDRMLPELKKRGHKVLLFSQMTSMLDILMDYCHLRDFNFSRLDGSMSYSER 638 Query: 98 PCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 + +N + ++ + + G G+NL + ++ + W+ + Q +R Sbjct: 639 EKNMHSFNTDPEVFIFLVSTRAGGLGINLT-AADTVIIYDSDWNPQSDLQAQDRC----- 692 Query: 157 RQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 + G + V VY L+ NTID+ +++R K ++ L++ Sbjct: 693 HRIGQTKPVVVYRLVTANTIDQKIVERAAAKRKLEKLII 731 >gi|325116690|emb|CBZ52243.1| hypothetical protein NCLIV_020290 [Neospora caninum Liverpool] Length = 677 Score = 102 bits (255), Expect = 2e-20, Method: Composition-based stats. Identities = 38/153 (24%), Positives = 65/153 (42%), Gaps = 20/153 (13%) Query: 54 EKIKALEVI---IEKANAAPIIVAYHFNSDLARLQKAF---------PQGRTLDKDPC-T 100 K++ LE + I ++ +++ +F S L ++ G T +D Sbjct: 521 SKMQFLENLLLSIRSSSDDKVVIVSNFTSTLDNIEIFMRAKGYSFLRLDGSTAVRDRTGL 580 Query: 101 IQEWNEGK-IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQA 159 ++ +NE + + G GLNL G N L+ W+ QQ + RI + Sbjct: 581 VKTFNESEQCFAFLLSSKAGGVGLNL-IGANRLILLDPDWNPANDQQALARIW-----RP 634 Query: 160 GFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQD 192 G VF+Y L+ TI+E +LQR K+T+ Sbjct: 635 GQVNPVFIYRLVGARTIEEKILQRQAYKTTLAQ 667 >gi|162312350|ref|XP_001713034.1| ubiquitin-protein ligase E3 (predicted) [Schizosaccharomyces pombe 972h-] gi|548669|sp|P36607|RAD5_SCHPO RecName: Full=DNA repair protein rad5 gi|443973|emb|CAA52686.1| rad8 [Schizosaccharomyces pombe] gi|159883887|emb|CAA89964.2| ubiquitin-protein ligase E3 (predicted) [Schizosaccharomyces pombe] Length = 1133 Score = 102 bits (255), Expect = 2e-20, Method: Composition-based stats. Identities = 29/158 (18%), Positives = 61/158 (38%), Gaps = 21/158 (13%) Query: 46 KHWKEVHDEKIK----ALEVIIEKANAAPIIVAYHFNSDLARLQK----------AFPQG 91 K+W + K+ L + + +++ F + L + F Sbjct: 955 KYWNRLQSVKLNGLLGQLRQLTHSSEPEKVVIFSQFTTFLDIIADVLESEKMGYARFDGT 1014 Query: 92 RTLDKDPCTIQEW-NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 + ++ + N+ + +L + G GLNL ++ + WW Q I+R Sbjct: 1015 MSQQMRSTALETFRNDPDVNVLIISLKAGGVGLNLTCANHVFIM-DPWWSWSVEAQAIDR 1073 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKS 188 I + G ++ VFV I ++T++E +L+ K+ Sbjct: 1074 I-----HRLGQEKPVFVTRYIVRDTVEERMLKIQERKN 1106 >gi|296814674|ref|XP_002847674.1| RING-13 protein [Arthroderma otae CBS 113480] gi|238840699|gb|EEQ30361.1| RING-13 protein [Arthroderma otae CBS 113480] Length = 1176 Score = 102 bits (255), Expect = 2e-20, Method: Composition-based stats. Identities = 27/166 (16%), Positives = 63/166 (37%), Gaps = 22/166 (13%) Query: 45 EKHWKEVHDEKIKALEVIIEKAN---AAPIIVAYHFNSDLARLQ----------KAFPQG 91 +K W+ K+ I+E + I+ F S L ++ + + Sbjct: 991 DKRWE--PSAKVDKTIEILESLHNSGDEKTIIFSQFTSLLDLIEVPINRRGWNYRRYDGS 1048 Query: 92 -RTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 + D++ + + ++ + GLNL + ++ +W+ Q I+R Sbjct: 1049 MKPADRNDSVLDFTDNPDCRIMLVSLKAGNAGLNL-VAASQVIILDPFWNPYIEDQAIDR 1107 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + G R V V+ L+ +NT+++ ++ K + + L+ Sbjct: 1108 -----AHRIGQMRPVMVHRLLVENTVEDRIIALQDKKRELIEGALD 1148 >gi|322492369|emb|CBZ27643.1| putative DNA repair protein [Leishmania mexicana MHOM/GT/2001/U1103] Length = 1092 Score = 102 bits (255), Expect = 2e-20, Method: Composition-based stats. Identities = 34/162 (20%), Positives = 66/162 (40%), Gaps = 20/162 (12%) Query: 49 KEVHDEKIKALEVIIEKA-NAAPIIVAYHFNSDLARLQKAFPQGR-----------TLDK 96 K +H K+ A+ IEK ++V F L L + + Q R TL + Sbjct: 919 KPLHGTKLDAIANYIEKVPKDEKVVVFSQFGGMLD-LTQYWLQRRSIRAVKLCGSLTLTQ 977 Query: 97 DPCTIQEW-NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTR 155 +Q + +E + ++ + G GLNLQ N +V WW+ Q ++R Sbjct: 978 RQSVLQAFLHEQSVRVILISLKAGGEGLNLQV-ANHVVLTDPWWNPAVEMQAVQR----- 1031 Query: 156 QRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + G R V + +++++E ++ K + + ++ Sbjct: 1032 AHRIGQTRPVHAVRFVTEHSVEERMVDLQDKKMLVFEGTIDG 1073 >gi|326430759|gb|EGD76329.1| hypothetical protein PTSG_01031 [Salpingoeca sp. ATCC 50818] Length = 752 Score = 102 bits (255), Expect = 3e-20, Method: Composition-based stats. Identities = 31/155 (20%), Positives = 58/155 (37%), Gaps = 18/155 (11%) Query: 54 EKIKALEVIIEKANAAPIIVAYHFNSDLA------RLQK----AFPQGRTLDKDPCTIQE 103 + L I+ I++ ++ L L+ T+ + + Sbjct: 481 AVLDCLLATIKMQTTDKIVLVSNYTQTLELFTTLCALRGYQYVRLDGSMTIKRRQKIVDR 540 Query: 104 WNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGF 161 +N+ + + G GLNL G N LV F W+ +Q + R+ + G Sbjct: 541 FNDPTSSDFIFMLSSKAGGCGLNL-IGANRLVMFDPDWNPANDEQAMARVW-----RDGQ 594 Query: 162 KRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + FVY + TI+E +LQR K + +++ Sbjct: 595 TKLCFVYRFVTTGTIEEKILQRQAHKKALSQCVVD 629 >gi|322790286|gb|EFZ15285.1| hypothetical protein SINV_14493 [Solenopsis invicta] Length = 647 Score = 102 bits (255), Expect = 3e-20, Method: Composition-based stats. Identities = 27/158 (17%), Positives = 59/158 (37%), Gaps = 19/158 (12%) Query: 52 HDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQK----------AFPQGRTLDKDPC 99 K+ L+ ++ K +++ L ++ ++ Sbjct: 442 SSGKLLVLDAMLAKLKVQGHKVLLFSTMTMILDLIEDYLTLRDYNYVRLDGSTAIETRKK 501 Query: 100 TIQEWNE-GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQ 158 I ++N L S G GLNL + ++ + W+ + Q + R + Sbjct: 502 NINKFNNDPDTFLFLISTRSGGVGLNL-MSADTVIIYDSDWNPQADIQAMARC-----HR 555 Query: 159 AGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 G + V VY L + TIDE +++R K ++ ++++ Sbjct: 556 IGQTKPVVVYRLCTRGTIDEAIIKRAEGKRILEKMVIS 593 >gi|301766462|ref|XP_002918636.1| PREDICTED: probable global transcription activator SNF2L1-like isoform 1 [Ailuropoda melanoleuca] Length = 1054 Score = 102 bits (255), Expect = 3e-20, Method: Composition-based stats. Identities = 44/242 (18%), Positives = 90/242 (37%), Gaps = 52/242 (21%) Query: 1 MKQY---HKFQRELYCDLQGENIEAFNSASKTVK------CLQL---ANGAVYYD----- 43 +K Y K QRE Y + ++I+ NSA K K +QL N +D Sbjct: 413 IKIYLGLSKMQREWYTKILMKDIDVLNSAGKMDKMRLLNILMQLRKCCNHPYLFDGAEPG 472 Query: 44 ---EEKHWKEVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQ---------KAFP 89 + K+ L+ ++ K + +++ L L+ Sbjct: 473 PPYTTDEHIVSNSGKMVVLDKLLAKLKEQGSRVLIFSQMTRLLDILEDYCMWRGYEYCRL 532 Query: 90 QGRTLDKDPCT-------------IQEWN--EGKIPLLFAHPASCGHGLNLQYGGNILVF 134 G+T ++ I+ +N + + G G+NL ++++ Sbjct: 533 DGQTPHEEREDKFLEVELLGQREAIEAFNVPNSNKFIFMLSTRAGGLGINL-ASADVVIL 591 Query: 135 FSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 + W+ + Q ++R + G K+ V V+ LI NT++E +++R K + ++ Sbjct: 592 YDSDWNPQVDLQAMDR-----AHRIGQKKPVRVFRLITDNTVEERIVERAEIKLRLDSIV 646 Query: 195 LN 196 + Sbjct: 647 IQ 648 >gi|254565235|ref|XP_002489728.1| ATPase that forms a large complex, containing actin and several actin-related proteins [Pichia pastoris GS115] gi|238029524|emb|CAY67447.1| ATPase that forms a large complex, containing actin and several actin-related proteins [Pichia pastoris GS115] gi|328350146|emb|CCA36546.1| DNA helicase INO80 [Pichia pastoris CBS 7435] Length = 1236 Score = 102 bits (255), Expect = 3e-20, Method: Composition-based stats. Identities = 25/161 (15%), Positives = 63/161 (39%), Gaps = 19/161 (11%) Query: 50 EVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQK----------AFPQGRTLDKD 97 + K+ L+ ++ + ++V + + +++ L Sbjct: 1040 VIESGKLAKLDKMLVRLKKEGHKVLVYFQMTKMMDLMEEFLTYRQYKYIRLDGSSKLSDR 1099 Query: 98 PCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 + +W + ++ + + G G+NL + ++F+ W+ Q ++R Sbjct: 1100 RDLVHDWQTKPELFVFLLSTRAGGLGINLT-AADTVIFYDSDWNPTIDSQAMDR-----A 1153 Query: 157 RQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + G R V VY L+ + TI+E + R + K +Q +++ Sbjct: 1154 HRLGQTRQVTVYRLLVRGTIEEKMRNRAKQKEHVQQVVMEG 1194 >gi|301761430|ref|XP_002916137.1| PREDICTED: lymphoid-specific helicase-like [Ailuropoda melanoleuca] Length = 837 Score = 102 bits (255), Expect = 3e-20, Method: Composition-based stats. Identities = 25/149 (16%), Positives = 56/149 (37%), Gaps = 19/149 (12%) Query: 58 ALEVIIEKANAAPIIVAYHFNSDLARLQK----------AFPQGRTLDKDPCTIQEWN-E 106 L + KA +++ L L + + + +N + Sbjct: 606 MLPEL--KARGHKVLLFSQMTRMLDILLDYCHFRNFNFSRLDGSMSYSEREKNMHSFNTD 663 Query: 107 GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVF 166 + + + G G+NL + ++ + W+ + Q +R + G + V Sbjct: 664 PDVFIFLVSTRAGGLGINLT-AADTVIIYDSDWNPQSDLQAQDRC-----HRIGQTKPVV 717 Query: 167 VYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 VY L+ NTID+ +++R K ++ L++ Sbjct: 718 VYRLVTANTIDQKIVERAAAKRKLEKLII 746 >gi|310796552|gb|EFQ32013.1| SNF2 family domain-containing protein [Glomerella graminicola M1.001] Length = 878 Score = 102 bits (255), Expect = 3e-20, Method: Composition-based stats. Identities = 30/163 (18%), Positives = 61/163 (37%), Gaps = 19/163 (11%) Query: 46 KHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQK----------AFPQGRT 93 K+ L+ ++ A +++ F + L LQ + Sbjct: 632 DESIVTSSGKMLMLDRLLPTLFAKGHKVLIFSQFKTQLDILQDYCELRKWNACRLDGSVS 691 Query: 94 LDKDPCTIQEWNE-GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIG 152 + I+E+NE + + G G+NL + ++ F W+ ++ Q +R Sbjct: 692 QESRRDQIKEFNENPDFKIFLLSTRAGGQGINL-ASADTVILFDSDWNPQQDLQAQDRC- 749 Query: 153 VTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 + G R V VY L + T++E +L K ++ L++ Sbjct: 750 ----HRIGQTRPVIVYRLATKGTVEEELLLSADAKRRLEKLII 788 >gi|302813632|ref|XP_002988501.1| hypothetical protein SELMODRAFT_427193 [Selaginella moellendorffii] gi|300143608|gb|EFJ10297.1| hypothetical protein SELMODRAFT_427193 [Selaginella moellendorffii] Length = 950 Score = 102 bits (255), Expect = 3e-20, Method: Composition-based stats. Identities = 34/155 (21%), Positives = 60/155 (38%), Gaps = 23/155 (14%) Query: 52 HDEKIKALEVIIEKANAA----PIIVAYHFNSDLARLQKAFPQGRTL----------DKD 97 KI AL ++EK A +V F++ L ++ + K Sbjct: 774 PSAKINALVSMLEKTRAKDPNIKSVVFSQFSTMLKLIEGPLQKAGFKFVKLEGGMSASKR 833 Query: 98 PCTIQEW---NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 ++ + G + + G GLNL N+ + WW+ +Q ++R+ Sbjct: 834 EENMEAFKSTRSGSPTVFLLSLKAAGVGLNLVTASNVFMM-DPWWNPAVEEQAMDRV--- 889 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKST 189 + G R V V+ LIA ++I+E +LQ K Sbjct: 890 --HRLGQTRDVHVFRLIATDSIEERLLQVQEKKRA 922 >gi|296220826|ref|XP_002756501.1| PREDICTED: lymphoid-specific helicase isoform 3 [Callithrix jacchus] Length = 805 Score = 102 bits (255), Expect = 3e-20, Method: Composition-based stats. Identities = 25/159 (15%), Positives = 62/159 (38%), Gaps = 19/159 (11%) Query: 50 EVHDEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQK----------AFPQGRTLDKD 97 ++ K L+ ++ + +++ S L L + + Sbjct: 562 VINSGKFLILDRMLPELKKRGHKVLLFSQMTSMLDILMDYCHLRNFNFSRLDGSMSYSER 621 Query: 98 PCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 + +N + ++ + + G G+NL + ++ + W+ + Q +R Sbjct: 622 ERNMHSFNTDPEVFIFLVSTRAGGLGINLT-AADTVIIYDSDWNPQSDLQAQDRC----- 675 Query: 157 RQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 + G + V VY L+ NTID+ +++R K ++ L++ Sbjct: 676 HRIGQTKPVVVYRLVTANTIDQKIVERAAAKRKLEKLII 714 >gi|51893808|ref|YP_076499.1| SNF2 family helicase [Symbiobacterium thermophilum IAM 14863] gi|51857497|dbj|BAD41655.1| Snf2 family helicase-like protein [Symbiobacterium thermophilum IAM 14863] Length = 499 Score = 102 bits (255), Expect = 3e-20, Method: Composition-based stats. Identities = 34/184 (18%), Positives = 65/184 (35%), Gaps = 26/184 (14%) Query: 25 SASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHF-NSDL 81 + + + QL N K+ LE + A ++ + L Sbjct: 300 ALTLLNQLKQLCN--------LDPATGASCKLAFLEQELAPLVARGEKAVIFSQYPKVTL 351 Query: 82 A-RLQKAFPQGRTLD-------KDPCTIQEWNEGKIP-LLFAHPASCGHGLNLQYGGNIL 132 L + P G L K + + G +P +L + G G+ L N + Sbjct: 352 EPLLPRLEPFGAVLFDGSLSDWKRQLIVHHFQHGDMPRVLAMSLKAGGVGITLTR-ANHV 410 Query: 133 VFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQD 192 WW+ QQ +R + G +R VFV L+ + T++E + + + K + Sbjct: 411 YHLDHWWNPAVAQQAEDR-----THRIGQRRPVFVTTLLTRGTVEERIAELVERKRELFH 465 Query: 193 LLLN 196 +++ Sbjct: 466 EVMD 469 >gi|300121515|emb|CBK22034.2| unnamed protein product [Blastocystis hominis] Length = 508 Score = 102 bits (255), Expect = 3e-20, Method: Composition-based stats. Identities = 37/185 (20%), Positives = 72/185 (38%), Gaps = 28/185 (15%) Query: 32 CLQLANGA--VYYDEEKHWKEVHDE-------KIKALEVIIEKA--NAAPIIVAYHFNSD 80 QL + VY ++ + DE K+ L+ +++ ++V F Sbjct: 315 LRQLVSHPYNVYEEKSSSGSYITDESIIQKSSKLTLLDNLLKVLIPKGHRVLVFVQFVET 374 Query: 81 LARLQ---------KAFPQGRTLDKDP-CTIQEWNEG-KIPLLFAHPASCGHGLNLQYGG 129 L L+ G TL D I+++ IP+ S G G+NL Sbjct: 375 LHLLEDYCTFRGYENCSIHGSTLQSDRDQEIKDFQSREDIPIFLLTTRSGGLGINL-SAA 433 Query: 130 NILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKST 189 + ++ + W+ ++ Q ++R + G KR V VY + T+D +L+ K Sbjct: 434 DTVILYDSDWNPQQDIQAMDR-----AHRLGQKRDVVVYRFVTLGTMDVQLLKIAEEKRK 488 Query: 190 IQDLL 194 ++ ++ Sbjct: 489 LERIV 493 >gi|170085783|ref|XP_001874115.1| RAD5-like protein [Laccaria bicolor S238N-H82] gi|164651667|gb|EDR15907.1| RAD5-like protein [Laccaria bicolor S238N-H82] Length = 1156 Score = 102 bits (255), Expect = 3e-20, Method: Composition-based stats. Identities = 40/167 (23%), Positives = 67/167 (40%), Gaps = 22/167 (13%) Query: 52 HDEKIKAL-EVIIEKANAAP---IIVAYHFNSDLARLQ-----KAFPQGRT-----LDKD 97 K+ AL + + + + P +V F S L +Q + F Q R + K Sbjct: 983 SSTKLNALIKSLCKLRDQDPCFRAVVFSQFTSFLDLIQVALERERFDQYRFDGTMDVKKK 1042 Query: 98 PCTIQEWNE--GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTR 155 I E+ K +L + G GLNL N + WW+ Q I+R+ Sbjct: 1043 SAAINEFKSFSRKGKVLVVSLKAGGVGLNLT-AANHVFMMDCWWNAATENQAIDRV---- 1097 Query: 156 QRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKET 202 + G ++ V+V + I NTI+ +LQ + K+ I + K + Sbjct: 1098 -HRIGQEKTVYVTHFIVANTIESRILQIQKRKTAIVNEAFRGSKSDP 1143 >gi|326924536|ref|XP_003208483.1| PREDICTED: probable global transcription activator SNF2L1-like [Meleagris gallopavo] Length = 1043 Score = 102 bits (255), Expect = 3e-20, Method: Composition-based stats. Identities = 44/230 (19%), Positives = 89/230 (38%), Gaps = 40/230 (17%) Query: 1 MKQY---HKFQRELYCDLQGENIEAFNSASKTVK------CLQL---ANGAVYYD----- 43 +K Y K QRE Y + ++I+ NSA K K +QL N +D Sbjct: 398 VKIYLGLSKMQREWYTRILMKDIDILNSAGKMDKMRLLNILMQLRKCCNHPYLFDGAEPG 457 Query: 44 ---EEKHWKEVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQ---------KAFP 89 + K+ L+ ++ K + +++ L L+ Sbjct: 458 PPYTTDTHLITNSGKMLVLDKLLAKLREQGSRVLLFSQMTRLLDILEDYCMWRGYEYCRL 517 Query: 90 QGRTL-DKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 G+T ++ I +N + + G G+NL ++++ + W+ + Q Sbjct: 518 DGQTPHEEREEAIDTFNAPNSSKFIFMLSTRAGGLGINL-ATADVVILYDSDWNPQVDLQ 576 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 ++R + G K+ V V+ LI NT++E +++R K + +++ Sbjct: 577 AMDR-----AHRIGQKKPVRVFRLITDNTVEERIVERAEIKLRLDSIVIQ 621 >gi|297816734|ref|XP_002876250.1| predicted protein [Arabidopsis lyrata subsp. lyrata] gi|297322088|gb|EFH52509.1| predicted protein [Arabidopsis lyrata subsp. lyrata] Length = 2043 Score = 102 bits (255), Expect = 3e-20, Method: Composition-based stats. Identities = 41/196 (20%), Positives = 77/196 (39%), Gaps = 32/196 (16%) Query: 32 CLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEK---------ANA------APIIVAYH 76 + NG E H + H K+ AL+ I+E+ ++ +++ Sbjct: 1772 LSAMINGCSDIITELHKVQ-HSPKLVALQEILEECGIGSDASSSDGTLSVGQHRVLIFAQ 1830 Query: 77 FNSDLARLQK-------------AFPQGRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHG 122 + L ++K +K ++ +N + I +L G G Sbjct: 1831 HKALLDIIEKDLFQTHMKSVTYMRLDGSVVPEKRFEIVKAFNSDPTIDVLLLTTHVGGLG 1890 Query: 123 LNLQYGGNILVFFSLWWDLEEHQQMIER-IGVTRQRQAGFKRAVFVYYLIAQNTIDELVL 181 LNL + LVF W+ Q+ + + R + G KR V V+ LI + T++E V+ Sbjct: 1891 LNLT-SADTLVFMEHDWNPMRDHQVNKLWQAMDRAHRLGQKRVVNVHRLIMRGTLEEKVM 1949 Query: 182 QRLRTKSTIQDLLLNA 197 R K ++ + ++NA Sbjct: 1950 SLQRFKVSVANTVINA 1965 >gi|281351280|gb|EFB26864.1| hypothetical protein PANDA_007143 [Ailuropoda melanoleuca] Length = 967 Score = 102 bits (255), Expect = 3e-20, Method: Composition-based stats. Identities = 44/242 (18%), Positives = 90/242 (37%), Gaps = 52/242 (21%) Query: 1 MKQY---HKFQRELYCDLQGENIEAFNSASKTVK------CLQL---ANGAVYYD----- 43 +K Y K QRE Y + ++I+ NSA K K +QL N +D Sbjct: 326 IKIYLGLSKMQREWYTKILMKDIDVLNSAGKMDKMRLLNILMQLRKCCNHPYLFDGAEPG 385 Query: 44 ---EEKHWKEVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQ---------KAFP 89 + K+ L+ ++ K + +++ L L+ Sbjct: 386 PPYTTDEHIVSNSGKMVVLDKLLAKLKEQGSRVLIFSQMTRLLDILEDYCMWRGYEYCRL 445 Query: 90 QGRTLDKDPCT-------------IQEWN--EGKIPLLFAHPASCGHGLNLQYGGNILVF 134 G+T ++ I+ +N + + G G+NL ++++ Sbjct: 446 DGQTPHEEREDKFLEVELLGQREAIEAFNVPNSNKFIFMLSTRAGGLGINL-ASADVVIL 504 Query: 135 FSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 + W+ + Q ++R + G K+ V V+ LI NT++E +++R K + ++ Sbjct: 505 YDSDWNPQVDLQAMDR-----AHRIGQKKPVRVFRLITDNTVEERIVERAEIKLRLDSIV 559 Query: 195 LN 196 + Sbjct: 560 IQ 561 >gi|149030493|gb|EDL85530.1| transcription termination factor, RNA polymerase II (predicted), isoform CRA_b [Rattus norvegicus] Length = 1070 Score = 102 bits (255), Expect = 3e-20, Method: Composition-based stats. Identities = 35/166 (21%), Positives = 67/166 (40%), Gaps = 18/166 (10%) Query: 43 DEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLA---------RLQKAFPQGRT 93 D+ + +V + LE I + + ++ + S L RL A G Sbjct: 893 DDIRRSTKVSS-LLAELEAIQKGPGSQKSVIVSQWTSMLQVVALHLRKNRLTYATIDGSV 951 Query: 94 LDKDPCT-IQEWNEGKIP-LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERI 151 K ++ +N + P ++ + G GLNL GGN L + W+ Q +RI Sbjct: 952 NPKQRMDLVEAFNHSQGPQVMLISLLAGGVGLNLT-GGNHLFLLDMHWNPSLEDQACDRI 1010 Query: 152 GVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + G ++ V ++ + + T++E +LQ K + +L+ Sbjct: 1011 -----YRVGQEKDVVMHRFVCEGTVEEKILQLQEKKKDLAKQVLSG 1051 >gi|296220824|ref|XP_002756500.1| PREDICTED: lymphoid-specific helicase isoform 2 [Callithrix jacchus] Length = 881 Score = 102 bits (255), Expect = 3e-20, Method: Composition-based stats. Identities = 25/159 (15%), Positives = 62/159 (38%), Gaps = 19/159 (11%) Query: 50 EVHDEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQK----------AFPQGRTLDKD 97 ++ K L+ ++ + +++ S L L + + Sbjct: 638 VINSGKFLILDRMLPELKKRGHKVLLFSQMTSMLDILMDYCHLRNFNFSRLDGSMSYSER 697 Query: 98 PCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 + +N + ++ + + G G+NL + ++ + W+ + Q +R Sbjct: 698 ERNMHSFNTDPEVFIFLVSTRAGGLGINLT-AADTVIIYDSDWNPQSDLQAQDRC----- 751 Query: 157 RQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 + G + V VY L+ NTID+ +++R K ++ L++ Sbjct: 752 HRIGQTKPVVVYRLVTANTIDQKIVERAAAKRKLEKLII 790 >gi|255576850|ref|XP_002529311.1| DNA repair helicase rad5,16, putative [Ricinus communis] gi|223531235|gb|EEF33080.1| DNA repair helicase rad5,16, putative [Ricinus communis] Length = 1051 Score = 102 bits (255), Expect = 3e-20, Method: Composition-based stats. Identities = 39/160 (24%), Positives = 64/160 (40%), Gaps = 19/160 (11%) Query: 42 YDEEKHWKEVH--DEKIKALEVIIEKANAAPIIVAYHFNSDLARLQ----------KAFP 89 + E++WKE + ++ LE I I+ + S L L+ F Sbjct: 873 VNVEENWKESSKVSKLLECLERIRRSDCGEKSIIFSQWTSFLDLLEIPLRRRAIGFLRFD 932 Query: 90 QGRTLDKDPCTIQEWNE-GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMI 148 + T++E+NE + +L + G GLNL N + WW+ +Q I Sbjct: 933 GKLVQKQRERTLKEFNETKEKMVLLMSLKAGGVGLNLTAASN-VFLMDPWWNPAVEEQAI 991 Query: 149 ERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKS 188 RI + G KR V V I ++T++E + Q K Sbjct: 992 MRI-----HRIGQKRTVTVRRFIVKDTLEERMQQVQARKQ 1026 >gi|194205833|ref|XP_001502326.2| PREDICTED: helicase, lymphoid-specific isoform 1 [Equus caballus] Length = 837 Score = 102 bits (255), Expect = 3e-20, Method: Composition-based stats. Identities = 24/149 (16%), Positives = 55/149 (36%), Gaps = 19/149 (12%) Query: 58 ALEVIIEKANAAPIIVAYHFNSDLARLQK----------AFPQGRTLDKDPCTIQEWN-E 106 L + K +++ L L + + + +N + Sbjct: 606 MLPEL--KTRGHKVLLFSQMTRMLDILMDYCHFRDFNFSRLDGSMSYSEREKNMHNFNTD 663 Query: 107 GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVF 166 + + + G G+NL + ++ + W+ + Q +R + G + V Sbjct: 664 PDVFIFLVSTRAGGLGINLT-AADTVIIYDSDWNPQSDLQAQDRC-----HRIGQTKPVV 717 Query: 167 VYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 VY L+ NTID+ +++R K ++ L++ Sbjct: 718 VYRLVTANTIDQKIVERAAAKRKLEKLII 746 >gi|221054017|ref|XP_002261756.1| SNF2-family protein [Plasmodium knowlesi strain H] gi|193808216|emb|CAQ38919.1| SNF2-family protein, putative [Plasmodium knowlesi strain H] Length = 3207 Score = 102 bits (255), Expect = 3e-20, Method: Composition-based stats. Identities = 30/181 (16%), Positives = 66/181 (36%), Gaps = 20/181 (11%) Query: 35 LANGAVYYDEEKHWKEVHDEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQ------- 85 L V DE K KI LE ++ + +++ L L Sbjct: 1689 LCCEPVDKDEYKERLVYSSGKICLLEKLLIRLKERGNRVLIFSQMVKMLNILSEYLTLRG 1748 Query: 86 ---KAFPQGRTLDKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWD 140 + + + + +N + + G G+NL + ++ + W+ Sbjct: 1749 FKHQRLDGTMSKEMRKKAMNHFNSKNSDDFVFLLSTKAGGLGINLT-SADTVIIYDSDWN 1807 Query: 141 LEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKK 200 + Q R + G + V +Y L+ +++I++ +L+R + K + L++ L K Sbjct: 1808 PQNDLQAGAR-----AHRIGQTKTVQIYRLVTKDSIEQTILERAKVKMVLDTLVVQGLNK 1862 Query: 201 E 201 + Sbjct: 1863 K 1863 >gi|148240736|ref|YP_001226123.1| SNF2 family DNA/RNA helicase [Synechococcus sp. WH 7803] gi|147849275|emb|CAK24826.1| Superfamily II DNA/RNA helicases, SNF2 family [Synechococcus sp. WH 7803] Length = 1070 Score = 102 bits (255), Expect = 3e-20, Method: Composition-based stats. Identities = 35/217 (16%), Positives = 76/217 (35%), Gaps = 36/217 (16%) Query: 8 QRELYCDLQGENIEAFNSA----------SKTVKCLQLANGAVYYDEEKHWKEVH---DE 54 Q+ LY + ++A A + Q+ N +E+ + Sbjct: 832 QKSLYAKTVEDTLDAIARAPRGKRHGQVLGLLTRLKQICNHPALALKEEVASDDFLQRSV 891 Query: 55 KIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGR------------TLDKDPCT 100 K++ LE I+++ ++ F ++ L + + Q R + + Sbjct: 892 KLQRLEEILDEVIEAGDRALLFTQF-AEWGHLLQGYLQRRWRSEVPFLSGSTSKGERQAM 950 Query: 101 IQEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQ 158 + + E L + G GLNL + + WW+ Q +R + Sbjct: 951 VDRFQEDPRGPQLFLLSLKAGGVGLNLTRASH-VFHIDRWWNPAVENQATDR-----AYR 1004 Query: 159 AGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 G V V+ I +++E + + +R KS + + ++ Sbjct: 1005 IGQTNRVMVHKFITSGSVEEKIDRMIREKSRLAEDIV 1041 >gi|9972383|gb|AAG10633.1|AC022521_11 Similar nucleotide excision repair proteins [Arabidopsis thaliana] Length = 627 Score = 102 bits (255), Expect = 3e-20, Method: Composition-based stats. Identities = 34/159 (21%), Positives = 56/159 (35%), Gaps = 21/159 (13%) Query: 52 HDEKIKALEV----IIEKANAAPIIVAYHFNSDLARLQKAFPQGRT-----------LDK 96 KI+AL ++E+ +A IV F S L + A + K Sbjct: 422 TSTKIEALREEIRFMVERDWSAKAIVFSQFTSFLDLISYALGKSGVSCVQLVGSMSKAAK 481 Query: 97 DPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 D E +L + G LNL + + WW+ +ER R Sbjct: 482 DAALKNFKEEPDCRVLLMSLQAGGVALNLT-AASHVFMMDPWWN-----PAVERQAQDRI 535 Query: 157 RQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 + G + V V I + T++E +L + K + + L Sbjct: 536 HRIGQCKPVRVVRFIMEKTVEEKILTLQKKKEDLFERFL 574 >gi|109090014|ref|XP_001095376.1| PREDICTED: lymphoid-specific helicase isoform 10 [Macaca mulatta] Length = 739 Score = 102 bits (255), Expect = 3e-20, Method: Composition-based stats. Identities = 24/159 (15%), Positives = 61/159 (38%), Gaps = 19/159 (11%) Query: 50 EVHDEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQK----------AFPQGRTLDKD 97 + K L+ ++ + +++ S L L + + Sbjct: 496 VTNSGKFLILDRMLPELKKRGHKVLLFSQMTSMLDILMDYCHLRDFNFSRLDGSMSYSER 555 Query: 98 PCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 + +N + ++ + + G G+NL + ++ + W+ + Q +R Sbjct: 556 EKNMHSFNMDPEVFIFLVSTRAGGLGINLT-AADTVIIYDSDWNPQSDLQAQDRC----- 609 Query: 157 RQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 + G + V VY L+ NT+D+ +++R K ++ L++ Sbjct: 610 HRIGQTKPVVVYRLVTANTVDQKIVERAAAKRKLEKLII 648 >gi|303284137|ref|XP_003061359.1| SNF2 super family [Micromonas pusilla CCMP1545] gi|226456689|gb|EEH53989.1| SNF2 super family [Micromonas pusilla CCMP1545] Length = 2006 Score = 102 bits (255), Expect = 3e-20, Method: Composition-based stats. Identities = 33/194 (17%), Positives = 77/194 (39%), Gaps = 22/194 (11%) Query: 17 GENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYH 76 G + A +++ K V Q+ A + +E + A + +++ +++ Sbjct: 1733 GGKVSAEDASPKFVALKQILLDAGIGRDPDVEREDQETGGFAKKE--SESSGHRVLIFTQ 1790 Query: 77 FNSDLARLQK-------------AFPQGRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHG 122 L +++ + ++++N + I +L G G Sbjct: 1791 LKGLLDLVEEELFGTMMRGVSWLRLDGSVPPTRRFDVVRKFNADPSIDVLLLTTHVGGLG 1850 Query: 123 LNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQ 182 LNL + +VF W+ ++ Q ++R + G K+ V VY L+ + T++E ++ Sbjct: 1851 LNLT-SADTVVFLEHDWNPQKDLQAMDR-----AHRLGQKKTVNVYRLLTKGTMEEKIMG 1904 Query: 183 RLRTKSTIQDLLLN 196 R K + + ++N Sbjct: 1905 LQRFKLDVANAVVN 1918 >gi|118092730|ref|XP_421626.2| PREDICTED: similar to proliferation-associated SNF2-like protein [Gallus gallus] Length = 822 Score = 102 bits (255), Expect = 3e-20, Method: Composition-based stats. Identities = 29/157 (18%), Positives = 63/157 (40%), Gaps = 19/157 (12%) Query: 52 HDEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQ-----KAFPQGRT------LDKDP 98 + K L+ ++ + +++ L L + F R D++ Sbjct: 580 NSGKFLLLDRMLPELKKRGHKVLMFSQMTMMLDILMDYCYLRGFKFSRLDGSMSYSDREE 639 Query: 99 CTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQ 158 Q N+ ++ L + G G+NL + ++ + W+ + Q +R + Sbjct: 640 NMHQFNNDPEVFLFLVSTRAGGLGINLT-AADTVIIYDSDWNPQSDLQAQDRC-----HR 693 Query: 159 AGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 G + V VY L+ NTID+ +++R K ++ L++ Sbjct: 694 IGQTKPVVVYRLVTANTIDQKIVERAAAKRKLEKLII 730 >gi|326917893|ref|XP_003205229.1| PREDICTED: DNA repair and recombination protein RAD54B-like [Meleagris gallopavo] Length = 918 Score = 102 bits (255), Expect = 3e-20, Method: Composition-based stats. Identities = 33/172 (19%), Positives = 70/172 (40%), Gaps = 23/172 (13%) Query: 50 EVHDEKIKALEVII----EKANAAPIIVAYHFNSDLARLQK----------AFPQGRTLD 95 E K++ L ++ E +++ +++ ++ L LQ+ + Sbjct: 645 ETDSGKLQVLVKLLAAIRELSSSERVVLVSNYTQTLNILQETCKRYGYSYTRLDGNTPVS 704 Query: 96 KDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGV 153 + + +N P + + G GLNL G + L+ + + W+ Q + R+ Sbjct: 705 QRQQIVDSFNCKFSPAFIFLLSSKAGGVGLNL-VGASHLILYDIDWNPATDIQAMARVW- 762 Query: 154 TRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK-KETIH 204 + G K V +Y L+ +I+E + QR +K + +++ K E IH Sbjct: 763 ----RDGQKHTVHIYRLLTTGSIEEKIYQRQISKQDLSGAVVDLSKTSEHIH 810 >gi|321256964|ref|XP_003193422.1| helicase [Cryptococcus gattii WM276] gi|317459892|gb|ADV21635.1| Helicase, putative [Cryptococcus gattii WM276] Length = 1238 Score = 102 bits (255), Expect = 3e-20, Method: Composition-based stats. Identities = 29/155 (18%), Positives = 67/155 (43%), Gaps = 19/155 (12%) Query: 55 KIKALEVIIE--KANAAPIIVAYHFNSDLARL---------QKAFPQGRTLDKDPCTI-Q 102 K++ L ++ K+ +++ L L + G T +D + + Sbjct: 932 KLQKLFEMLRNLKSEGHRVLIFTQMTRVLDILEMFLSYNGHRYLRLDGSTKIEDRQVLTE 991 Query: 103 EWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGF 161 +N + +I + A S G G+NL G + + F+ W+ ++R + R + G Sbjct: 992 RFNSDPRIFVFIASSRSGGVGINLT-GADTVFFYDSDWNPS-----MDRQCMDRAHRIGQ 1045 Query: 162 KRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 R V +Y ++ +T++E +L++ K + +++ Sbjct: 1046 TREVHIYRFVSSHTVEENMLRKAEQKRLLDKMVIQ 1080 >gi|323490931|ref|ZP_08096126.1| ATP-dependent helicase [Planococcus donghaensis MPA1U2] gi|323395411|gb|EGA88262.1| ATP-dependent helicase [Planococcus donghaensis MPA1U2] Length = 907 Score = 102 bits (255), Expect = 3e-20, Method: Composition-based stats. Identities = 38/217 (17%), Positives = 72/217 (33%), Gaps = 29/217 (13%) Query: 2 KQYHKFQRELYCDLQGENIEAFN----SASKTVKCLQLANGA-VYYDEEKHWKEVHDEKI 56 Y ++ ++ + F K QL N +Y E + Sbjct: 679 ALYEGLVQDTVQKME--TLTGFEKKGLVLKMLSKLKQLCNHPSLYLKEPYTNAAEILPRS 736 Query: 57 KALEVIIEKAN-----AAPIIVAYHFNSDLARLQKA----------FPQGR-TLDKDPCT 100 + LE I+ A ++ + LQ+A F G + Sbjct: 737 QKLERIVTLAGEIAERGEQCLIFTQYIGMGHILQQAINELYGHEVPFLTGSMPKQQRDSL 796 Query: 101 IQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 + ++ GK P+ + G GLNL ++L WW+ Q +R + G Sbjct: 797 VAQFQAGKFPIFILSLKAGGTGLNLTAATHVL-HADRWWNPAVENQATDR-----AYRIG 850 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + V V+ + TI+E + L K ++ + + + Sbjct: 851 QTQFVHVHKFVTIGTIEEKIDSLLVQKQSMSEEFIQS 887 >gi|118370404|ref|XP_001018403.1| SNF2 family N-terminal domain containing protein [Tetrahymena thermophila] gi|89300170|gb|EAR98158.1| SNF2 family N-terminal domain containing protein [Tetrahymena thermophila SB210] Length = 1547 Score = 102 bits (255), Expect = 3e-20, Method: Composition-based stats. Identities = 26/159 (16%), Positives = 60/159 (37%), Gaps = 19/159 (11%) Query: 52 HDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQKAFPQGRTL-----------DKDP 98 K+K L+ ++ K +++ + L+ + + D+ Sbjct: 1279 DSAKLKYLDALLTKLKREGHRVLIFCQMTRMIDILEDFMTRKKYKFFRLDGSCNISDRRD 1338 Query: 99 CTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQ 158 + K + G G+ L ++++F+ W+ Q ++R + Sbjct: 1339 MVNEFQTSDKTFAFLLSTRAGGLGVTLT-AADVVIFYDNDWNPTMDAQAMDR-----AHR 1392 Query: 159 AGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 G + V VY L+ + TI+E +L+R + K +Q + + Sbjct: 1393 IGQTKEVLVYRLVTKGTIEERILKRAQQKQMVQSTVYSG 1431 >gi|329930625|ref|ZP_08284117.1| SNF2 family N-terminal domain protein [Paenibacillus sp. HGF5] gi|328934720|gb|EGG31215.1| SNF2 family N-terminal domain protein [Paenibacillus sp. HGF5] Length = 986 Score = 102 bits (255), Expect = 3e-20, Method: Composition-based stats. Identities = 31/192 (16%), Positives = 67/192 (34%), Gaps = 29/192 (15%) Query: 27 SKTVK--CLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLA 82 + K +L G D E K++ L ++++ ++ + Sbjct: 779 ALLTKEPLPELPGGGGLLDTEAVVNR--SAKLERLLSMVKELRDEGERCLIFTQYIGMGE 836 Query: 83 RLQKAFPQ-----------GRTLDKDPCTIQEWNEGKIP------LLFAHPASCGHGLNL 125 +++ Q I+++ +P ++ + G GLNL Sbjct: 837 MMRQVLHQELGEPVLYLNGSTPKGTRDRMIEQFQSRTLPPEEQPNVMILSIKAGGVGLNL 896 Query: 126 QYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLR 185 N + F WW+ Q +R + G + V VY I+ T++E + + L Sbjct: 897 T-AANHVFHFDRWWNPAVENQATDR-----AYRMGQTKDVQVYKFISMGTLEERIDEMLE 950 Query: 186 TKSTIQDLLLNA 197 +K + D ++ + Sbjct: 951 SKQQLSDQVIAS 962 >gi|296220822|ref|XP_002756499.1| PREDICTED: lymphoid-specific helicase isoform 1 [Callithrix jacchus] Length = 837 Score = 102 bits (255), Expect = 3e-20, Method: Composition-based stats. Identities = 25/159 (15%), Positives = 62/159 (38%), Gaps = 19/159 (11%) Query: 50 EVHDEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQK----------AFPQGRTLDKD 97 ++ K L+ ++ + +++ S L L + + Sbjct: 594 VINSGKFLILDRMLPELKKRGHKVLLFSQMTSMLDILMDYCHLRNFNFSRLDGSMSYSER 653 Query: 98 PCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 + +N + ++ + + G G+NL + ++ + W+ + Q +R Sbjct: 654 ERNMHSFNTDPEVFIFLVSTRAGGLGINLT-AADTVIIYDSDWNPQSDLQAQDRC----- 707 Query: 157 RQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 + G + V VY L+ NTID+ +++R K ++ L++ Sbjct: 708 HRIGQTKPVVVYRLVTANTIDQKIVERAAAKRKLEKLII 746 >gi|157822353|ref|NP_001099841.1| helicase, lymphoid specific [Rattus norvegicus] gi|149062802|gb|EDM13225.1| rCG47275 [Rattus norvegicus] Length = 837 Score = 102 bits (255), Expect = 3e-20, Method: Composition-based stats. Identities = 28/159 (17%), Positives = 61/159 (38%), Gaps = 19/159 (11%) Query: 50 EVHDEKIKALEVIIEKANAA--PIIVAYHFNSDLARLQK----------AFPQGRTLDKD 97 + K L+ ++ + ++V S L L + + Sbjct: 594 VTNSGKFLILDRMLPELKKRCHKVLVFSQMTSMLDILMDYCHLRNFTFSRLDGSMSYSER 653 Query: 98 PCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 I +N + ++ L + G G+NL + ++ + W+ + Q +R Sbjct: 654 EKNIYSFNTDPEVFLFLVSTRAGGLGINLT-AADTVIIYDSDWNPQSDLQAQDRC----- 707 Query: 157 RQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 + G + V VY L+ NTID+ +++R K ++ L++ Sbjct: 708 HRIGQTKPVVVYRLVTANTIDQKIVERAAAKRKLEKLII 746 >gi|201066350|ref|NP_001128432.1| RAD54 like [Rattus norvegicus] gi|197246624|gb|AAI69034.1| Rad54l protein [Rattus norvegicus] Length = 748 Score = 102 bits (255), Expect = 3e-20, Method: Composition-based stats. Identities = 33/168 (19%), Positives = 68/168 (40%), Gaps = 23/168 (13%) Query: 45 EKHWKEVHDEKIKALEVII----EKANAAPIIVAYHFNSDLARLQK----------AFPQ 90 K + K+ L+ I+ +++ ++V ++ L +K Sbjct: 487 SKAVEPQLSGKMLVLDYILAMTRSRSSDKVVLV-SNYTQTLDLFEKLCRARRYLYVRLDG 545 Query: 91 GRTLDKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMI 148 ++ K ++ +N P + + G GLNL G N LV F W+ +Q + Sbjct: 546 TMSIKKRAKVVERFNSPSSPDFVFMLSSKAGGCGLNL-IGANRLVMFDPDWNPANDEQAM 604 Query: 149 ERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 R+ + G K+ ++Y L++ TI+E + QR K + +++ Sbjct: 605 ARVW-----RDGQKKICYIYRLLSAGTIEEKIFQRQSHKKALSSCVVD 647 >gi|20987234|gb|AAH21643.1| RAD54 like (S. cerevisiae) [Mus musculus] Length = 747 Score = 102 bits (255), Expect = 3e-20, Method: Composition-based stats. Identities = 33/168 (19%), Positives = 68/168 (40%), Gaps = 23/168 (13%) Query: 45 EKHWKEVHDEKIKALEVII----EKANAAPIIVAYHFNSDLARLQK----------AFPQ 90 K + K+ L+ I+ +++ ++V ++ L +K Sbjct: 487 SKAVEPQLSGKMLVLDYILAVTRSRSSDKVVLV-SNYTQTLDLFEKLCRVRRYLYVRLDG 545 Query: 91 GRTLDKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMI 148 ++ K ++ +N P + + G GLNL G N LV F W+ +Q + Sbjct: 546 TMSIKKRAKVVERFNSPSSPDFVFMLSSKAGGCGLNL-IGANRLVMFDPDWNPANDEQAM 604 Query: 149 ERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 R+ + G K+ ++Y L++ TI+E + QR K + +++ Sbjct: 605 ARVW-----RDGQKKICYIYRLLSAGTIEEKIFQRQSHKKALSSCVVD 647 >gi|76879794|dbj|BAE45737.1| putative protein product of Nbla10143 [Homo sapiens] Length = 372 Score = 102 bits (255), Expect = 3e-20, Method: Composition-based stats. Identities = 25/159 (15%), Positives = 61/159 (38%), Gaps = 19/159 (11%) Query: 50 EVHDEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQK----------AFPQGRTLDKD 97 + K L+ ++ + +++ S L L + + Sbjct: 129 VTNSGKFLILDRMLPELKKRGHKVLLFSQMTSMLDILMDYCHLRDFNFSRLDGSMSYSER 188 Query: 98 PCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 + +N + ++ + + G G+NL + ++ + W+ + Q +R Sbjct: 189 EKNMHSFNTDPEVFIFLVSTRAGGLGINLT-AADTVIIYDSDWNPQSDPQAQDRC----- 242 Query: 157 RQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 + G + V VY L+ NTID+ +++R K ++ L++ Sbjct: 243 HRIGQTKPVVVYRLVTANTIDQKIVERAAAKRKLEKLII 281 >gi|171906595|ref|NP_033041.3| DNA repair and recombination protein RAD54-like [Mus musculus] gi|171906597|ref|NP_001116430.1| DNA repair and recombination protein RAD54-like [Mus musculus] gi|171906599|ref|NP_001116431.1| DNA repair and recombination protein RAD54-like [Mus musculus] gi|51316197|sp|P70270|RAD54_MOUSE RecName: Full=DNA repair and recombination protein RAD54-like; AltName: Full=RAD54 homolog; Short=mHR54; Short=mRAD54 gi|123244614|emb|CAM20670.1| RAD54 like (S. cerevisiae) [Mus musculus] gi|123253898|emb|CAM22667.1| RAD54 like (S. cerevisiae) [Mus musculus] gi|148698674|gb|EDL30621.1| RAD54 like (S. cerevisiae) [Mus musculus] Length = 747 Score = 102 bits (255), Expect = 3e-20, Method: Composition-based stats. Identities = 33/168 (19%), Positives = 68/168 (40%), Gaps = 23/168 (13%) Query: 45 EKHWKEVHDEKIKALEVII----EKANAAPIIVAYHFNSDLARLQK----------AFPQ 90 K + K+ L+ I+ +++ ++V ++ L +K Sbjct: 487 SKAVEPQLSGKMLVLDYILAVTRSRSSDKVVLV-SNYTQTLDLFEKLCRVRRYLYVRLDG 545 Query: 91 GRTLDKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMI 148 ++ K ++ +N P + + G GLNL G N LV F W+ +Q + Sbjct: 546 TMSIKKRAKVVERFNSPSSPDFVFMLSSKAGGCGLNL-IGANRLVMFDPDWNPANDEQAM 604 Query: 149 ERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 R+ + G K+ ++Y L++ TI+E + QR K + +++ Sbjct: 605 ARVW-----RDGQKKICYIYRLLSAGTIEEKIFQRQSHKKALSSCVVD 647 >gi|1495708|emb|CAA66380.1| RAD54 [Mus musculus] Length = 747 Score = 102 bits (255), Expect = 3e-20, Method: Composition-based stats. Identities = 33/168 (19%), Positives = 68/168 (40%), Gaps = 23/168 (13%) Query: 45 EKHWKEVHDEKIKALEVII----EKANAAPIIVAYHFNSDLARLQK----------AFPQ 90 K + K+ L+ I+ +++ ++V ++ L +K Sbjct: 487 SKAVEPQLSGKMLVLDYILAVTRSRSSDKVVLV-SNYTQTLDLFEKLCRVRRYLYVRLDG 545 Query: 91 GRTLDKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMI 148 ++ K ++ +N P + + G GLNL G N LV F W+ +Q + Sbjct: 546 TMSIKKRAKVVERFNSPSSPDFVFMLSSKAGGCGLNL-IGANRLVMFDPDWNPANDEQAM 604 Query: 149 ERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 R+ + G K+ ++Y L++ TI+E + QR K + +++ Sbjct: 605 ARVW-----RDGQKKICYIYRLLSAGTIEEKIFQRQSHKKALSSCVVD 647 >gi|307202701|gb|EFN82007.1| Lymphoid-specific helicase [Harpegnathos saltator] Length = 587 Score = 102 bits (255), Expect = 3e-20, Method: Composition-based stats. Identities = 28/158 (17%), Positives = 61/158 (38%), Gaps = 19/158 (12%) Query: 52 HDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQK----------AFPQGRTLDKDPC 99 K+ L+ ++ K A +++ L ++ ++ Sbjct: 373 SSGKLLVLDAMLAKLKAQGHKVLLFSTMTMILDIIEDYLSLRDYKYLRLDGNDNIELRKR 432 Query: 100 TIQEWNEGK-IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQ 158 I +N K I L + G GLNL + ++ + W+ + Q + R + Sbjct: 433 NIDNFNNNKDIFLFLISIRAGGIGLNL-AAADTVIIYDSDWNPQVDIQAMARC-----HR 486 Query: 159 AGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 G + V +Y L + TIDE ++ R +K ++ ++++ Sbjct: 487 IGQTKPVVIYKLCTKGTIDEAIINRSESKRILEKMVIS 524 >gi|119570415|gb|EAW50030.1| helicase, lymphoid-specific, isoform CRA_e [Homo sapiens] Length = 432 Score = 102 bits (255), Expect = 3e-20, Method: Composition-based stats. Identities = 25/159 (15%), Positives = 61/159 (38%), Gaps = 19/159 (11%) Query: 50 EVHDEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQK----------AFPQGRTLDKD 97 + K L+ ++ + +++ S L L + + Sbjct: 189 VTNSGKFLILDRMLPELKKRGHKVLLFSQMTSMLDILMDYCHLRDFNFSRLDGSMSYSER 248 Query: 98 PCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 + +N + ++ + + G G+NL + ++ + W+ + Q +R Sbjct: 249 EKNMHSFNTDPEVFIFLVSTRAGGLGINLT-AADTVIIYDSDWNPQSDLQAQDRC----- 302 Query: 157 RQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 + G + V VY L+ NTID+ +++R K ++ L++ Sbjct: 303 HRIGQTKPVVVYRLVTANTIDQKIVERAAAKRKLEKLII 341 >gi|15217826|ref|NP_171767.1| DNA repair protein, putative [Arabidopsis thaliana] gi|332189335|gb|AEE27456.1| putative DNA repair protein [Arabidopsis thaliana] Length = 678 Score = 102 bits (255), Expect = 3e-20, Method: Composition-based stats. Identities = 34/159 (21%), Positives = 56/159 (35%), Gaps = 21/159 (13%) Query: 52 HDEKIKALEV----IIEKANAAPIIVAYHFNSDLARLQKAFPQGRT-----------LDK 96 KI+AL ++E+ +A IV F S L + A + K Sbjct: 505 TSTKIEALREEIRFMVERDWSAKAIVFSQFTSFLDLISYALGKSGVSCVQLVGSMSKAAK 564 Query: 97 DPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 D E +L + G LNL + + WW+ +ER R Sbjct: 565 DAALKNFKEEPDCRVLLMSLQAGGVALNLT-AASHVFMMDPWWN-----PAVERQAQDRI 618 Query: 157 RQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 + G + V V I + T++E +L + K + + L Sbjct: 619 HRIGQCKPVRVVRFIMEKTVEEKILTLQKKKEDLFESTL 657 >gi|291239296|ref|XP_002739559.1| PREDICTED: Lodestar protein-like [Saccoglossus kowalevskii] Length = 1134 Score = 102 bits (255), Expect = 3e-20, Method: Composition-based stats. Identities = 31/160 (19%), Positives = 67/160 (41%), Gaps = 21/160 (13%) Query: 56 IKALEVI-IEKANAAPI--IVAYHFNSDLARLQKAFPQGR----------TLDKDPCTIQ 102 + L+ I + P+ ++ + L + + T +++ Sbjct: 965 MDGLKDIRAKSPAGKPMKTVIVSQWTKMLDIMVHHLKENGFKYCVIQGNVTPKARSESVE 1024 Query: 103 EWN-EGKIP-LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 +N K P ++ + G GLNL GGN L + W+ QQ +RI + G Sbjct: 1025 NFNKNPKGPEVMLVSLRAGGVGLNL-IGGNHLFLLDMHWNPALEQQACDRI-----YRVG 1078 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKK 200 ++ VF++ + +NT++E +L+ + K+ + +L+ + Sbjct: 1079 QEKEVFIHKFVCKNTVEEKILELQKKKTNLATNVLSGDRA 1118 >gi|239610005|gb|EEQ86992.1| SNF2 family helicase/ATPase PasG [Ajellomyces dermatitidis ER-3] Length = 862 Score = 102 bits (254), Expect = 3e-20, Method: Composition-based stats. Identities = 32/175 (18%), Positives = 65/175 (37%), Gaps = 23/175 (13%) Query: 42 YDEEKHWKE---VHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQK---------- 86 D+ H E K+ L+ +I + I++ F + L LQ Sbjct: 600 DDDPSHIDESLITSSGKMLLLDRLIPCLMSKGHKILIFSQFKTQLDLLQDYATYLRGWNC 659 Query: 87 -AFPQGRTLDKDPCTIQEWNEG-KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEH 144 + IQ +N + + G G+NL + ++ F W+ ++ Sbjct: 660 CRIDGAVSQVDRQAQIQAFNTNQDYRIFLLSTRAGGQGINLT-AADTVILFDSDWNPQQD 718 Query: 145 QQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 Q R + G + V VY L + T+++ +L++ +K ++ L++ K Sbjct: 719 LQA-----QDRAHRIGQTKPVIVYRLATRGTVEQTLLEKADSKRRLEKLVIQKGK 768 >gi|260827184|ref|XP_002608545.1| hypothetical protein BRAFLDRAFT_128832 [Branchiostoma floridae] gi|229293896|gb|EEN64555.1| hypothetical protein BRAFLDRAFT_128832 [Branchiostoma floridae] Length = 1220 Score = 102 bits (254), Expect = 3e-20, Method: Composition-based stats. Identities = 27/161 (16%), Positives = 59/161 (36%), Gaps = 19/161 (11%) Query: 52 HDEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQK----------AFPQGRTLDKDPC 99 K+ L+ ++ + ++V + L+ Sbjct: 965 SSGKLLLLDKMLPMLHKQGHKVLVFSQMTKMMDVLEDYCLYRGHKYCRLDGTMAYPDRQE 1024 Query: 100 TIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQ 158 I +N + + + G G+NL + ++ + W+ + Q +R + Sbjct: 1025 QIDTFNKDPDYFVFLLSTRAGGLGINLT-AADTVIIYDSDWNPQCDLQAQDRC-----HR 1078 Query: 159 AGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 G R V VY LI NTID+ +++R K ++ ++++ K Sbjct: 1079 IGQTRPVVVYRLITANTIDQKIVERAAGKRKLEKMVMHKGK 1119 >gi|320169825|gb|EFW46724.1| DNA repair protein RAD54 [Capsaspora owczarzaki ATCC 30864] Length = 941 Score = 102 bits (254), Expect = 3e-20, Method: Composition-based stats. Identities = 34/167 (20%), Positives = 68/167 (40%), Gaps = 21/167 (12%) Query: 45 EKHWKEVHDEKIKALEVI---IEKANAAPIIVAYHFNS------DLARLQK----AFPQG 91 + + H K + L+ + ++ +++ ++ DLARL+ Sbjct: 600 GRTFNPAHSGKFQVLDTMLAYVKSTTNDRVVLISNYTQTIDLFEDLARLRGYRFVRLDGT 659 Query: 92 RTLDKDPCTIQEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIE 149 ++ + E+N + L + G G+NL GGN LV F W+ Q + Sbjct: 660 LSVKARQKLVDEFNNPSSNVFLFLLSSKAGGCGINL-IGGNRLVLFDPDWNPASDGQAMA 718 Query: 150 RIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 R+ + G K+ V++Y + TI+E + QR K + +++ Sbjct: 719 RVW-----RDGQKKKVYLYRFLGTGTIEEKIFQRQAHKMALSSCVVD 760 >gi|303279422|ref|XP_003059004.1| SNF2 super family [Micromonas pusilla CCMP1545] gi|226460164|gb|EEH57459.1| SNF2 super family [Micromonas pusilla CCMP1545] Length = 1131 Score = 102 bits (254), Expect = 3e-20, Method: Composition-based stats. Identities = 33/153 (21%), Positives = 64/153 (41%), Gaps = 18/153 (11%) Query: 54 EKIKALEVIIEKANAAPIIVAYHFNSDLARLQK----------AFPQGRTLDKDPCTIQE 103 + L I+ I++ ++ L +Q G ++ K +++ Sbjct: 538 AVLARLLAILRAETKDRIVIISNYTQTLDLVQFLCKQNNYPHCRLDGGTSITKRQKLVRQ 597 Query: 104 WNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGF 161 +N+ + + G G+NL GGN LV F W+ +Q R + G Sbjct: 598 FNDPTENCFVFLLSSKAGGCGINL-IGGNRLVLFDPDWNPANDKQAAARCW-----RDGQ 651 Query: 162 KRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 K+ ++Y L A +I+E V QR +K ++Q+++ Sbjct: 652 KKKCYLYRLFATGSIEEKVFQRQLSKESLQNVV 684 >gi|119570416|gb|EAW50031.1| helicase, lymphoid-specific, isoform CRA_f [Homo sapiens] Length = 822 Score = 102 bits (254), Expect = 3e-20, Method: Composition-based stats. Identities = 25/159 (15%), Positives = 61/159 (38%), Gaps = 19/159 (11%) Query: 50 EVHDEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQK----------AFPQGRTLDKD 97 + K L+ ++ + +++ S L L + + Sbjct: 579 VTNSGKFLILDRMLPELKKRGHKVLLFSQMTSMLDILMDYCHLRDFNFSRLDGSMSYSER 638 Query: 98 PCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 + +N + ++ + + G G+NL + ++ + W+ + Q +R Sbjct: 639 EKNMHSFNTDPEVFIFLVSTRAGGLGINLT-AADTVIIYDSDWNPQSDLQAQDRC----- 692 Query: 157 RQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 + G + V VY L+ NTID+ +++R K ++ L++ Sbjct: 693 HRIGQTKPVVVYRLVTANTIDQKIVERAAAKRKLEKLII 731 >gi|114631897|ref|XP_001150864.1| PREDICTED: helicase, lymphoid-specific isoform 4 [Pan troglodytes] Length = 822 Score = 102 bits (254), Expect = 3e-20, Method: Composition-based stats. Identities = 25/159 (15%), Positives = 61/159 (38%), Gaps = 19/159 (11%) Query: 50 EVHDEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQK----------AFPQGRTLDKD 97 + K L+ ++ + +++ S L L + + Sbjct: 579 VTNSGKFLILDRMLPELKKRGHKVLLFSQMTSMLDILMDYCHLRDFNFSRLDGSMSYSER 638 Query: 98 PCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 + +N + ++ + + G G+NL + ++ + W+ + Q +R Sbjct: 639 EKNMHSFNTDPEVFIFLVSTRAGGLGINLT-AADTVIIYDSDWNPQSDLQAQDRC----- 692 Query: 157 RQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 + G + V VY L+ NTID+ +++R K ++ L++ Sbjct: 693 HRIGQTKPVVVYRLVTANTIDQKIVERAAAKRKLEKLII 731 >gi|47156981|gb|AAT12357.1| helicase MOT1-like protein [Antonospora locustae] Length = 509 Score = 102 bits (254), Expect = 3e-20, Method: Composition-based stats. Identities = 36/205 (17%), Positives = 75/205 (36%), Gaps = 37/205 (18%) Query: 17 GENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANA----APII 72 G ++ +S ++ + L+L + K+ ALE ++ + Sbjct: 298 GNVNKSTSSFTRIQRLLKLCSTF---------------KLGALEDLLVLMGGNEMKTKAL 342 Query: 73 VAYHFNSDLARLQKA------------FPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCG 120 V S + + K + ++N +LF G Sbjct: 343 VFCQLKSTIDMITKHVNGVFASLKHLRLDGNVPPKNRQKLVADFNTQDYNILFLTTQIGG 402 Query: 121 HGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELV 180 GLNL G + ++ + W+ Q ++R+ + G K+ V V+ +I ++TI+E V Sbjct: 403 LGLNLT-GADTVILYEHDWNPFNDLQAMDRV-----HRLGQKKTVNVFRIILKDTIEEKV 456 Query: 181 LQRLRTKSTIQDLLLNALKKETIHV 205 + K + + L+N K+ + Sbjct: 457 MSYQNFKMYVANALVNYENKDVSQM 481 >gi|316974864|gb|EFV58334.1| domain protein, SNF2 family [Trichinella spiralis] Length = 1667 Score = 102 bits (254), Expect = 3e-20, Method: Composition-based stats. Identities = 37/176 (21%), Positives = 72/176 (40%), Gaps = 39/176 (22%) Query: 53 DEKIKALEVIIEK---------------ANA---APIIVAYHFNSDLARLQKAFPQG--- 91 K++AL+ ++ + +N ++ + S L L F +G Sbjct: 1424 SGKMQALKQLLSECSIGSSNLADCDAVQSNGISAHRALIFCQYKSALNLLCTFFTRGYFG 1483 Query: 92 -----------RTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWW 139 ++ Q++N + I LL G GLNL G ++++FF W Sbjct: 1484 KGISFLKMDGSVEPERRQELAQQFNSDPSIDLLILTTQIGGLGLNLT-GADVVIFFDHDW 1542 Query: 140 DLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 + Q ++R + G R V VY LI+Q T++E +++ + K+ + D ++ Sbjct: 1543 NPCRDIQAMDR-----AHRIGQTRTVNVYRLISQGTLEEKIMRFQKFKNFMADTVI 1593 >gi|291404474|ref|XP_002718566.1| PREDICTED: helicase, lymphoid-specific [Oryctolagus cuniculus] Length = 837 Score = 102 bits (254), Expect = 3e-20, Method: Composition-based stats. Identities = 24/159 (15%), Positives = 59/159 (37%), Gaps = 19/159 (11%) Query: 50 EVHDEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQK----------AFPQGRTLDKD 97 + K L+ ++ + +++ L L + + Sbjct: 594 VTNSGKFLILDRMLPELQKRGHKVLLFSQMTRMLDILMDYCHLRNFNFSRLDGSMSYSER 653 Query: 98 PCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 + +N + + + + G G+NL + ++ + W+ + Q +R Sbjct: 654 EKNMHSFNTDPDVFIFLVSTRAGGLGINLT-AADTVIIYDSDWNPQSDLQAQDRC----- 707 Query: 157 RQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 + G + V VY L+ NTID+ +++R K ++ L++ Sbjct: 708 HRIGQTKPVVVYRLVTANTIDQKIVERAAAKRKLEKLII 746 >gi|158295466|ref|XP_316223.4| AGAP006165-PA [Anopheles gambiae str. PEST] gi|157016051|gb|EAA11849.4| AGAP006165-PA [Anopheles gambiae str. PEST] Length = 3418 Score = 102 bits (254), Expect = 3e-20, Method: Composition-based stats. Identities = 30/156 (19%), Positives = 65/156 (41%), Gaps = 19/156 (12%) Query: 55 KIKALEVIIEK--ANAAPIIVAYHFNSDLARLQ---------KAFPQGRTLDKDPCTI-- 101 K++ L+ +++K + +++ L L+ G T + + Sbjct: 1728 KLQTLDRLLKKLKSEGHRVLIFTQMTRMLDVLEAFLNYHGHIYLRLDGTTKVEQRQVLME 1787 Query: 102 QEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGF 161 + N+ ++ S G G+NL G + ++F+ W+ Q +R + G Sbjct: 1788 RFNNDRRMFAFILSTRSGGVGINLT-GADTVIFYDSDWNPTMDAQAQDRC-----HRIGQ 1841 Query: 162 KRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 R V +Y L+++ TI+E +L++ K + DL + Sbjct: 1842 TRDVHIYRLVSEKTIEENILKKANQKRILGDLAIEG 1877 >gi|148232962|ref|NP_001086442.1| helicase, lymphoid-specific [Xenopus laevis] gi|66911167|gb|AAH97562.1| HELLS protein [Xenopus laevis] Length = 838 Score = 102 bits (254), Expect = 3e-20, Method: Composition-based stats. Identities = 25/157 (15%), Positives = 58/157 (36%), Gaps = 19/157 (12%) Query: 52 HDEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQK----------AFPQGRTLDKDPC 99 K L+ ++ + +++ L L + Sbjct: 600 SSGKFLLLDRLLPEMKKRGHKVLIFSQMTMMLDILMDYCYYKKFNFCRLDGSMSYTDREE 659 Query: 100 TIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQ 158 ++ +N + + + + G G+NL + ++ + W+ + Q +R + Sbjct: 660 NMRSFNTDPDVFIFLVSTRAGGLGINLT-AADTVIIYDSDWNPQADLQAQDRC-----HR 713 Query: 159 AGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 G R V VY L+ NTID+ +++R K ++ L++ Sbjct: 714 IGQTRPVVVYRLVTANTIDQKIVERAAAKRKLEKLVI 750 >gi|311253615|ref|XP_003125618.1| PREDICTED: DNA repair and recombination protein RAD54B-like, partial [Sus scrofa] Length = 838 Score = 102 bits (254), Expect = 3e-20, Method: Composition-based stats. Identities = 30/166 (18%), Positives = 64/166 (38%), Gaps = 22/166 (13%) Query: 50 EVHDEKIKALEVIIEKANA----APIIVAYHFNSDLARLQK----------AFPQGRTLD 95 E K++ L ++ + +++ ++ L LQ+ + Sbjct: 639 EEESGKLQVLSKLLAVIHELRPAEKVVLVSNYTQTLNILQEVCRRHGYGCTRLDGQTPIS 698 Query: 96 KDPCTIQEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGV 153 + + +N + + G GLNL GG+ L+ + + W+ Q + R+ Sbjct: 699 QRQQIVDGFNSKYSSDFIFLLSSKAGGVGLNL-IGGSHLILYDIDWNPATDIQAMSRVW- 756 Query: 154 TRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 + G K V +Y L+ TI+E + QR +K + +++ K Sbjct: 757 ----RDGQKHPVHIYRLLTTGTIEEKIYQRQISKQDLSGAVVDLTK 798 >gi|167522321|ref|XP_001745498.1| hypothetical protein [Monosiga brevicollis MX1] gi|163775847|gb|EDQ89469.1| predicted protein [Monosiga brevicollis MX1] Length = 817 Score = 102 bits (254), Expect = 3e-20, Method: Composition-based stats. Identities = 34/210 (16%), Positives = 76/210 (36%), Gaps = 35/210 (16%) Query: 13 CDLQGENIEAFNSASKTVKCLQL--------------ANGAVYYDEEKHWKEVHDEKIKA 58 +L N A + S + +QL Y +E ++ K+K Sbjct: 533 AELAQRNSSAVVNVSLQNRLMQLRKVCNHPYLIEYPLTATGDYRIDEALVQQG--GKLKI 590 Query: 59 LEVIIEK--ANAAPIIVAYHFNSDLARLQK----------AFPQGRTLDKDPCTIQEW-N 105 L+ ++ + A +++ L LQ + + ++ Sbjct: 591 LDQLLPRIKAEGRKVLIFSQMTKMLDILQDYCWLRDYGFVRLDGSVHYTEREEALDKFAK 650 Query: 106 EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 + + + G GLNL + + + W+ ++ Q +R + G + V Sbjct: 651 DSDTFIFLLSTRAGGLGLNL-VSADTCIIYDSDWNPQQDLQAQDRC-----HRIGQRNPV 704 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 +Y LI NT+D+ +L+R +K ++ +++ Sbjct: 705 IIYRLITANTVDQRILERAESKRRLEKMVM 734 >gi|168056923|ref|XP_001780467.1| SNF2 family DNA-dependent ATPase [Physcomitrella patens subsp. patens] gi|162668143|gb|EDQ54757.1| SNF2 family DNA-dependent ATPase [Physcomitrella patens subsp. patens] Length = 698 Score = 102 bits (254), Expect = 3e-20, Method: Composition-based stats. Identities = 39/212 (18%), Positives = 78/212 (36%), Gaps = 22/212 (10%) Query: 2 KQYHKFQR-ELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEK--HWKEVHDEKIKA 58 K+YHK C ++ E N + T+ + L G V + K + K +A Sbjct: 462 KKYHKMAVFGNECTVERVQEELSNYSDFTLHRMCLVYGGVPGGQGKLDDHHALASAKCRA 521 Query: 59 LEVIIEKA--NAAPIIVAYHFNSDLARLQKAFP---------QGRTLDKDPCTIQE--WN 105 L ++ + ++ + + L L+ A G T + + + N Sbjct: 522 LVTLLPQLKKEGHRPLIFSQWTNMLDILEWALDVIGLRFTRLDGSTPVTERQNLVDEYNN 581 Query: 106 EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 I + + G GLNL +++ + ++R R + G + V Sbjct: 582 NPDIFVFLLSTRAGGQGLNLTGADTVIIHD------VDFNPQMDRQAEDRCHRIGQTKPV 635 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 VY L+ + T+DE + + + K + +L + Sbjct: 636 TVYRLVTKGTVDESIFRIAQQKLVLDAAVLES 667 >gi|308810895|ref|XP_003082756.1| SNF2 domain-containing protein / helicase domain-containing protein / RING finger domain-containing protein (ISS) [Ostreococcus tauri] gi|116061225|emb|CAL56613.1| SNF2 domain-containing protein / helicase domain-containing protein / RING finger domain-containing protein (ISS) [Ostreococcus tauri] Length = 1008 Score = 102 bits (254), Expect = 3e-20, Method: Composition-based stats. Identities = 25/155 (16%), Positives = 56/155 (36%), Gaps = 19/155 (12%) Query: 56 IKALEVIIEKANAA--PIIVAYHFNSDLARLQKAFPQGR----------TLDKDPCTIQE 103 + AL + + N IV + + + ++ + + + + +Q Sbjct: 841 VNALRDMRNQENGQLNKAIVFSQYTAMIEIVEWRLKKAKFTIAKLLGSMPVTQRAANLQA 900 Query: 104 W-NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFK 162 + + + ++ S G GLNLQ N + WW+ Q + R + G Sbjct: 901 FREDPNVSVILMSLKSGGEGLNLQ-AANYVYVLEPWWNPAVEMQAV-----MRAHRIGQH 954 Query: 163 RAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 R V + TI+E +++ K + + ++ Sbjct: 955 RPVTAVRFSTKGTIEERMMELQEKKQLVFEGCMDG 989 >gi|26353994|dbj|BAC40627.1| unnamed protein product [Mus musculus] Length = 747 Score = 102 bits (254), Expect = 3e-20, Method: Composition-based stats. Identities = 28/139 (20%), Positives = 57/139 (41%), Gaps = 18/139 (12%) Query: 70 PIIVAYHFNSDLARLQK----------AFPQGRTLDKDPCTIQEWNEGKIP--LLFAHPA 117 +++ ++ L +K ++ K ++ +N P + Sbjct: 515 KVVLVSNYTQTLDLFEKLCRVRRYLYVRLDGTMSIKKRAKVVERFNSPSSPDFVFMLSSK 574 Query: 118 SCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 + G GLNL G N LV F W+ +Q + R+ + G K+ ++Y L++ TI+ Sbjct: 575 AGGCGLNL-IGANRLVMFDPDWNPANDEQAMARVW-----RDGQKKICYIYRLLSAGTIE 628 Query: 178 ELVLQRLRTKSTIQDLLLN 196 E + QR K + +++ Sbjct: 629 EKIFQRQSHKKALSSCVVD 647 >gi|301098711|ref|XP_002898448.1| SNF2 family helicase/ATPase and F-box protein, putative [Phytophthora infestans T30-4] gi|262105219|gb|EEY63271.1| SNF2 family helicase/ATPase and F-box protein, putative [Phytophthora infestans T30-4] Length = 2503 Score = 102 bits (254), Expect = 3e-20, Method: Composition-based stats. Identities = 32/166 (19%), Positives = 68/166 (40%), Gaps = 19/166 (11%) Query: 44 EEKHWKEVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQK----------AFPQG 91 +K + K++ L V++ ++ +S L L+ Sbjct: 1067 PDKALVQFDCGKLQQLAVLLRTLKRGGHRCLIFTQMSSMLNILEAFLNLHGHTYFRLDGA 1126 Query: 92 RTLDKDPCTIQEWNEG-KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 +DK ++ +N KI S G G+NL G + ++F+ W+ Q Sbjct: 1127 TKVDKRQMLMERFNRDEKIFCFILSTRSGGLGINLT-GADAVIFYDSDWNPAMDAQA--- 1182 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 R + G R V +Y L++++T++E +L++ + K + L+++ Sbjct: 1183 --QDRAHRIGQTRDVHIYRLVSEHTVEENILRKAQQKRHLDFLVMS 1226 >gi|255010206|ref|ZP_05282332.1| SNF family helicase [Bacteroides fragilis 3_1_12] Length = 1013 Score = 102 bits (254), Expect = 3e-20, Method: Composition-based stats. Identities = 27/178 (15%), Positives = 58/178 (32%), Gaps = 20/178 (11%) Query: 29 TVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQK 86 ++ QLA K+ + E ++ +++ F L + Sbjct: 827 ILRLRQLACHPQMILPG---FIGESGKLNLIIETFETLRSEGHKVLIFSSFVKHLELVAD 883 Query: 87 AFPQ---------GRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSL 137 F + G + ++ + + +I + G GLNL + + Sbjct: 884 EFRKRQWDYALLTGSSTNRPEEIARFSRDPRIQAFLISLKAGGVGLNLTQADYVFI-IDP 942 Query: 138 WWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 WW+ + R + G + V Y I Q +I+E ++Q K + + + Sbjct: 943 WWNPAAEA-----QAIARAHRIGQDKQVIAYRFITQGSIEEKIIQLQEEKRKLAETFI 995 >gi|47208011|emb|CAF91219.1| unnamed protein product [Tetraodon nigroviridis] Length = 454 Score = 102 bits (254), Expect = 3e-20, Method: Composition-based stats. Identities = 26/139 (18%), Positives = 53/139 (38%), Gaps = 17/139 (12%) Query: 68 AAPIIVAYHFNSDLARLQK----------AFPQGRTLDKDPCTIQEW-NEGKIPLLFAHP 116 +++ S L L T I ++ + ++ L Sbjct: 252 GHKVLIFSQMTSILDILMDYCFLRGFQYSRLDGSMTFADREENITKFSKDPQVFLFLLST 311 Query: 117 ASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTI 176 + G G+NL + ++ F W+ + Q +R + G + V VY L+ NTI Sbjct: 312 RAGGLGINLT-AADTVIIFDSDWNPQADLQAQDRC-----HRIGQTKPVVVYRLVTANTI 365 Query: 177 DELVLQRLRTKSTIQDLLL 195 D+ +L+R K ++ +++ Sbjct: 366 DQKILERASNKRKLEQMVI 384 >gi|170577655|ref|XP_001894090.1| Type III restriction enzyme, res subunit family protein [Brugia malayi] gi|158599485|gb|EDP37070.1| Type III restriction enzyme, res subunit family protein [Brugia malayi] Length = 805 Score = 102 bits (254), Expect = 3e-20, Method: Composition-based stats. Identities = 31/154 (20%), Positives = 58/154 (37%), Gaps = 20/154 (12%) Query: 51 VHDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQK----------AFPQGRTLDKDP 98 K+ ++ + +++ +F L L++ K Sbjct: 475 TDSGKLNVFVELLATFREQEEKVVIVSNFTQTLDLLEELCRTLYYTILRLDGSTEAKKRM 534 Query: 99 CTIQEWNE--GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 ++E+N K + G GLNL G N ++ F W+ Q + RI Sbjct: 535 EIVEEFNSLSNKNYAFLLSAKAGGLGLNL-VGANRMILFDSDWNPAVDMQAMARIW---- 589 Query: 157 RQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 + G ++ ++ LI T+DE +LQR KS++ Sbjct: 590 -RQGQEKPCHIFRLITAGTVDEKILQRQIKKSSL 622 >gi|109090000|ref|XP_001095601.1| PREDICTED: lymphoid-specific helicase isoform 12 [Macaca mulatta] Length = 883 Score = 102 bits (254), Expect = 3e-20, Method: Composition-based stats. Identities = 24/159 (15%), Positives = 61/159 (38%), Gaps = 19/159 (11%) Query: 50 EVHDEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQK----------AFPQGRTLDKD 97 + K L+ ++ + +++ S L L + + Sbjct: 640 VTNSGKFLILDRMLPELKKRGHKVLLFSQMTSMLDILMDYCHLRDFNFSRLDGSMSYSER 699 Query: 98 PCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 + +N + ++ + + G G+NL + ++ + W+ + Q +R Sbjct: 700 EKNMHSFNMDPEVFIFLVSTRAGGLGINLT-AADTVIIYDSDWNPQSDLQAQDRC----- 753 Query: 157 RQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 + G + V VY L+ NT+D+ +++R K ++ L++ Sbjct: 754 HRIGQTKPVVVYRLVTANTVDQKIVERAAAKRKLEKLII 792 >gi|46108786|ref|XP_381451.1| hypothetical protein FG01275.1 [Gibberella zeae PH-1] Length = 1023 Score = 102 bits (254), Expect = 3e-20, Method: Composition-based stats. Identities = 40/165 (24%), Positives = 73/165 (44%), Gaps = 19/165 (11%) Query: 50 EVHDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAFPQGR----------TLDKD 97 E+ K++ L +I + N ++V F+ + LQ+ Q + T+++ Sbjct: 840 EMDSGKVRKLLELINHYQENGDRVLVFSKFSRVIELLQEVLAQQQIQHRVLMGSTTVEER 899 Query: 98 PCTIQEWNEG-KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 I E+NE IP+ + G G+NL N ++ F + ++ Q R Sbjct: 900 QTLIDEFNEDSDIPVFLLTTGAGGTGINLT-AANKVIIFDQSDNPQDDIQA-----ENRA 953 Query: 157 RQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 + G KR V + LIA NTI+EL+ + + K + + + A+ E Sbjct: 954 HRLGQKRDVEIIRLIATNTIEELIYKACQKKIELANKVTGAVADE 998 >gi|119181658|ref|XP_001242026.1| hypothetical protein CIMG_05922 [Coccidioides immitis RS] Length = 835 Score = 102 bits (254), Expect = 3e-20, Method: Composition-based stats. Identities = 26/169 (15%), Positives = 62/169 (36%), Gaps = 19/169 (11%) Query: 44 EEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQK----------AFPQG 91 + K+ L+ ++ + +++ F + L LQ Sbjct: 584 DIDESLVTASGKMLLLDRLVPCLLSKGHKVLIFSQFKTQLDILQDWAYLRNWNCCRIDGA 643 Query: 92 RTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 + I +N + + + G G+NL + ++ + W+ ++ Q Sbjct: 644 VSQADRQAQINAFNADPDYKIFLLSTRAGGLGINLT-AADTVILYDSDWNPQQDLQA--- 699 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 R + G + V VY L + T+++ +L+R +K ++ L++ K Sbjct: 700 --QDRAHRIGQTKPVIVYRLATRGTVEQTLLERADSKRRLEKLVIQKGK 746 >gi|261198639|ref|XP_002625721.1| SNF2 family helicase/ATPase PasG [Ajellomyces dermatitidis SLH14081] gi|239594873|gb|EEQ77454.1| SNF2 family helicase/ATPase PasG [Ajellomyces dermatitidis SLH14081] Length = 862 Score = 102 bits (254), Expect = 3e-20, Method: Composition-based stats. Identities = 32/175 (18%), Positives = 65/175 (37%), Gaps = 23/175 (13%) Query: 42 YDEEKHWKE---VHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQK---------- 86 D+ H E K+ L+ +I + I++ F + L LQ Sbjct: 600 DDDPSHIDESLITSSGKMLLLDGLIPCLMSKGHKILIFSQFKTQLDLLQDYATYLRGWNC 659 Query: 87 -AFPQGRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEH 144 + IQ +N + + G G+NL + ++ F W+ ++ Sbjct: 660 CRIDGAVSQVDRQAQIQAFNTNQDYRIFLLSTRAGGQGINLT-AADTVILFDSDWNPQQD 718 Query: 145 QQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 Q R + G + V VY L + T+++ +L++ +K ++ L++ K Sbjct: 719 LQA-----QDRAHRIGQTKPVIVYRLATRGTVEQTLLEKADSKRRLEKLVIQKGK 768 >gi|118089662|ref|XP_420329.2| PREDICTED: similar to SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1 [Gallus gallus] Length = 1031 Score = 102 bits (254), Expect = 3e-20, Method: Composition-based stats. Identities = 44/230 (19%), Positives = 89/230 (38%), Gaps = 40/230 (17%) Query: 1 MKQY---HKFQRELYCDLQGENIEAFNSASKTVK------CLQL---ANGAVYYD----- 43 +K Y K QRE Y + ++I+ NSA K K +QL N +D Sbjct: 386 VKIYLGLSKMQREWYTRILMKDIDILNSAGKMDKMRLLNILMQLRKCCNHPYLFDGAEPG 445 Query: 44 ---EEKHWKEVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQ---------KAFP 89 + K+ L+ ++ K + +++ L L+ Sbjct: 446 PPYTTDTHLITNSGKMLVLDKLLAKLREQGSRVLLFSQMTRLLDILEDYCMWRGYEYCRL 505 Query: 90 QGRTL-DKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 G+T ++ I +N + + G G+NL ++++ + W+ + Q Sbjct: 506 DGQTPHEEREEAIDTFNAPNSSKFIFMLSTRAGGLGINL-ATADVVILYDSDWNPQVDLQ 564 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 ++R + G K+ V V+ LI NT++E +++R K + +++ Sbjct: 565 AMDR-----AHRIGQKKPVRVFRLITDNTVEERIVERAEIKLRLDSIVIQ 609 >gi|32425420|gb|AAH15477.1| HELLS protein [Homo sapiens] Length = 317 Score = 102 bits (254), Expect = 3e-20, Method: Composition-based stats. Identities = 25/159 (15%), Positives = 61/159 (38%), Gaps = 19/159 (11%) Query: 50 EVHDEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQK----------AFPQGRTLDKD 97 + K L+ ++ + +++ S L L + + Sbjct: 74 VTNSGKFLILDRMLPELKKRGHKVLLFSQMTSMLDILMDYCHLRDFNFSRLDGSMSYSER 133 Query: 98 PCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 + +N + ++ + + G G+NL + ++ + W+ + Q +R Sbjct: 134 EKNMHSFNTDPEVFIFLVSTRAGGLGINLT-AADTVIIYDSDWNPQSDLQAQDRC----- 187 Query: 157 RQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 + G + V VY L+ NTID+ +++R K ++ L++ Sbjct: 188 HRIGQTKPVVVYRLVTANTIDQKIVERAAAKRKLEKLII 226 >gi|300785422|ref|YP_003765713.1| helicase [Amycolatopsis mediterranei U32] gi|299794936|gb|ADJ45311.1| putative helicase [Amycolatopsis mediterranei U32] Length = 1005 Score = 102 bits (254), Expect = 3e-20, Method: Composition-based stats. Identities = 32/184 (17%), Positives = 61/184 (33%), Gaps = 20/184 (10%) Query: 26 ASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFN----- 78 + K Q+ N + + K+ LE I+ + A+ ++ + Sbjct: 800 LAAITKLKQVCNHPAHLLHDGSPIGQRSGKVTRLEEILAEILASGDRVLCFTQYTEFGHL 859 Query: 79 ---SDLARL---QKAFPQGRTLDKDPCTIQEWNEGKIP-LLFAHPASCGHGLNLQYGGNI 131 RL G ++ + G P +L + G GL L G + Sbjct: 860 LVPHLSDRLGAEVAFLHGGLAKGARDAIVERFQAGDGPRILVLSLKAGGSGLTLTAAGQV 919 Query: 132 LVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQ 191 L WW+ Q +R + G +R V V + TI+E + + K + Sbjct: 920 L-HLDRWWNPAVENQATDR-----AFRIGQRRNVQVRKFVCPGTIEERIDSLITRKRALA 973 Query: 192 DLLL 195 +++ Sbjct: 974 GMVV 977 >gi|225557945|gb|EEH06230.1| lymphocyte-specific helicase [Ajellomyces capsulatus G186AR] Length = 862 Score = 102 bits (254), Expect = 3e-20, Method: Composition-based stats. Identities = 31/174 (17%), Positives = 66/174 (37%), Gaps = 23/174 (13%) Query: 43 DEEKHWKEV---HDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQK----------- 86 D+ H + K+ L+ +I + I++ F + L LQ Sbjct: 601 DDPSHIDDTLITSSGKMLLLDRLIPCLISKGHKILIFSQFKTQLDLLQDYASYLRGWNCC 660 Query: 87 AFPQGRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQ 145 + IQ +N + + + G G+NL + ++ F W+ ++ Sbjct: 661 RIDGAVSQVDRQAQIQAFNTDPDYRIFLLSTRAGGQGINLT-AADTVILFDSDWNPQQDL 719 Query: 146 QMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 Q R + G + V VY L + T+++ +L++ +K ++ L++ K Sbjct: 720 QA-----QDRAHRIGQTKPVIVYRLATRGTVEQTLLEKADSKRRLEKLVIQKGK 768 >gi|109090006|ref|XP_001095492.1| PREDICTED: lymphoid-specific helicase isoform 11 [Macaca mulatta] Length = 805 Score = 102 bits (254), Expect = 3e-20, Method: Composition-based stats. Identities = 24/159 (15%), Positives = 61/159 (38%), Gaps = 19/159 (11%) Query: 50 EVHDEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQK----------AFPQGRTLDKD 97 + K L+ ++ + +++ S L L + + Sbjct: 562 VTNSGKFLILDRMLPELKKRGHKVLLFSQMTSMLDILMDYCHLRDFNFSRLDGSMSYSER 621 Query: 98 PCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 + +N + ++ + + G G+NL + ++ + W+ + Q +R Sbjct: 622 EKNMHSFNMDPEVFIFLVSTRAGGLGINLT-AADTVIIYDSDWNPQSDLQAQDRC----- 675 Query: 157 RQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 + G + V VY L+ NT+D+ +++R K ++ L++ Sbjct: 676 HRIGQTKPVVVYRLVTANTVDQKIVERAAAKRKLEKLII 714 >gi|83286456|ref|XP_730169.1| chromodomain-helicase-DNA-binding protein, CHD-1-related [Plasmodium yoelii yoelii str. 17XNL] gi|23489816|gb|EAA21734.1| chromodomain-helicase-DNA-binding protein, CHD-1-related [Plasmodium yoelii yoelii] Length = 2541 Score = 102 bits (254), Expect = 3e-20, Method: Composition-based stats. Identities = 29/181 (16%), Positives = 66/181 (36%), Gaps = 20/181 (11%) Query: 35 LANGAVYYDEEKHWKEVHDEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQ------- 85 L + DE + KI LE ++ + +++ L L Sbjct: 1216 LCCEPIDKDEYRERLVYSSGKICLLEKLLIRLKERGNRVLIFSQMVKMLNILSEYLTLRG 1275 Query: 86 ---KAFPQGRTLDKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWD 140 + T + + +N + + G G+NL + ++ + W+ Sbjct: 1276 FKHQRLDGTMTKEMRKKAMNHFNSKNSDDFVFLLSTKAGGLGINLT-SADTVIIYDSDWN 1334 Query: 141 LEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKK 200 + Q R + G + V +Y L+ +++I++ +L+R + K + L++ L K Sbjct: 1335 PQNDLQAGAR-----AHRIGQTKTVQIYRLVTKDSIEQTILERAKVKMVLDTLVVQGLNK 1389 Query: 201 E 201 + Sbjct: 1390 K 1390 >gi|313148000|ref|ZP_07810193.1| Snf2 family helicase [Bacteroides fragilis 3_1_12] gi|313136767|gb|EFR54127.1| Snf2 family helicase [Bacteroides fragilis 3_1_12] Length = 960 Score = 102 bits (254), Expect = 3e-20, Method: Composition-based stats. Identities = 27/178 (15%), Positives = 58/178 (32%), Gaps = 20/178 (11%) Query: 29 TVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQK 86 ++ QLA K+ + E ++ +++ F L + Sbjct: 774 ILRLRQLACHPQMILPG---FIGESGKLNLIIETFETLRSEGHKVLIFSSFVKHLELVAD 830 Query: 87 AFPQ---------GRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSL 137 F + G + ++ + + +I + G GLNL + + Sbjct: 831 EFRKRQWDYALLTGSSTNRPEEIARFSRDPRIQAFLISLKAGGVGLNLTQADYVFI-IDP 889 Query: 138 WWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 WW+ + R + G + V Y I Q +I+E ++Q K + + + Sbjct: 890 WWNPAAEA-----QAIARAHRIGQDKQVIAYRFITQGSIEEKIIQLQEEKRKLAETFI 942 >gi|292496|gb|AAA80559.1| transcription activator [Homo sapiens] Length = 976 Score = 102 bits (254), Expect = 3e-20, Method: Composition-based stats. Identities = 43/242 (17%), Positives = 90/242 (37%), Gaps = 52/242 (21%) Query: 1 MKQY---HKFQRELYCDLQGENIEAFNSASKTVK------CLQL---ANGAVYYD----- 43 +K Y K QRE Y + ++I+ NS+ K K +QL N +D Sbjct: 335 IKIYLGLSKMQREWYTKILMKDIDVLNSSGKMDKMRLLNILMQLRKCCNHPYLFDGAEPG 394 Query: 44 ---EEKHWKEVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQ---------KAFP 89 + K+ L+ ++ K + +++ L L+ Sbjct: 395 PPYTTDEHIVSNSGKMVVLDKLLAKLKEQGSRVLIFSQMTRLLDILEDYCMWRGYEYCRL 454 Query: 90 QGRTLDKDPCT-------------IQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVF 134 G+T ++ I+ +N + + G G+NL ++++ Sbjct: 455 DGQTPHEEREDKFLEVEFLGQREAIEAFNAPNSSKFIFMLSTRAGGLGINL-ASADVVIL 513 Query: 135 FSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 + W+ + Q ++R + G K+ V V+ LI NT++E +++R K + ++ Sbjct: 514 YDSDWNPQVDLQAMDR-----AHRIGQKKPVRVFRLITDNTVEERIVERAEIKLRLDSIV 568 Query: 195 LN 196 + Sbjct: 569 IQ 570 >gi|317031266|ref|XP_001393115.2| SWI/SNF family DNA-dependent ATPase Ris1 [Aspergillus niger CBS 513.88] Length = 1136 Score = 102 bits (254), Expect = 3e-20, Method: Composition-based stats. Identities = 28/167 (16%), Positives = 66/167 (39%), Gaps = 23/167 (13%) Query: 45 EKHWKEVHDEKIKALEVIIE----KANAAPIIVAYHFNSDLARL-----QKAFPQGR--- 92 EK W + KI+ I+ + I+ F S L L ++ + R Sbjct: 955 EKTW--MSSAKIEKAMEILRDVYHREGNEKTIIFSQFTSLLDLLEIPIARQGWDYRRYDG 1012 Query: 93 ---TLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIE 149 D++ + + ++ + GLNL + ++ F +W+ +Q ++ Sbjct: 1013 SMRPADRNTSVMDFTDNEDCRIMLVSLKAGNAGLNL-VAASQVIIFDPFWNPYVEEQAVD 1071 Query: 150 RIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 R + G R V ++ ++ ++T+++ +L+ K + + L+ Sbjct: 1072 R-----AHRIGQVRPVQIHRIVVKDTVEDRILELQDKKRELVEGALD 1113 >gi|238487276|ref|XP_002374876.1| SWI/SNF family DNA-dependent ATPase Ris1, putative [Aspergillus flavus NRRL3357] gi|220699755|gb|EED56094.1| SWI/SNF family DNA-dependent ATPase Ris1, putative [Aspergillus flavus NRRL3357] Length = 1172 Score = 102 bits (254), Expect = 3e-20, Method: Composition-based stats. Identities = 31/165 (18%), Positives = 66/165 (40%), Gaps = 21/165 (12%) Query: 45 EKHWKEVHDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQ----------KAFPQG- 91 EK W V KI+ I+ + I+ F S L L+ + + Sbjct: 994 EKTW--VSSAKIEKAMDILRGIQEGEEKTIIFSQFTSLLDLLEVPIVRQGWGYRRYDGSM 1051 Query: 92 RTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERI 151 + D++ + + ++ + GLNL + ++ F +W+ +Q I+R Sbjct: 1052 KPGDRNSAVLDFTDSPDCKIMLVSLKAGNSGLNL-VAASQVIIFDPFWNPYIEEQAIDR- 1109 Query: 152 GVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + G R V ++ ++ QNT+++ +L+ K + + L+ Sbjct: 1110 ----AHRIGQVREVQIHRILVQNTVEDRILELQDKKRELIEGALD 1150 >gi|149745541|ref|XP_001500568.1| PREDICTED: SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1 [Equus caballus] Length = 1057 Score = 102 bits (254), Expect = 3e-20, Method: Composition-based stats. Identities = 44/242 (18%), Positives = 90/242 (37%), Gaps = 52/242 (21%) Query: 1 MKQY---HKFQRELYCDLQGENIEAFNSASKTVK------CLQL---ANGAVYYD----- 43 +K Y K QRE Y + ++I+ NSA K K +QL N +D Sbjct: 416 IKIYLGLSKMQREWYTKILMKDIDVLNSAGKMDKMRLLNILMQLRKCCNHPYLFDGAEPG 475 Query: 44 ---EEKHWKEVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQ---------KAFP 89 + K+ L+ ++ K + +++ L L+ Sbjct: 476 PPYTTDEHIVSNSGKMVVLDKLLAKLKEQGSRVLIFSQMTRLLDILEDYCMWRGYEYCRL 535 Query: 90 QGRTLDKDPCT-------------IQEWN--EGKIPLLFAHPASCGHGLNLQYGGNILVF 134 G+T ++ I+ +N + + G G+NL ++++ Sbjct: 536 DGQTPHEEREDKFLEVELLGQREAIEAFNVPNSSKFIFMLSTRAGGLGINL-ASADVVIL 594 Query: 135 FSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 + W+ + Q ++R + G K+ V V+ LI NT++E +++R K + ++ Sbjct: 595 YDSDWNPQVDLQAMDR-----AHRIGQKKPVRVFRLITDNTVEERIVERAEIKLRLDSIV 649 Query: 195 LN 196 + Sbjct: 650 IQ 651 >gi|296220832|ref|XP_002756504.1| PREDICTED: lymphoid-specific helicase isoform 6 [Callithrix jacchus] Length = 821 Score = 102 bits (254), Expect = 3e-20, Method: Composition-based stats. Identities = 25/159 (15%), Positives = 62/159 (38%), Gaps = 19/159 (11%) Query: 50 EVHDEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQK----------AFPQGRTLDKD 97 ++ K L+ ++ + +++ S L L + + Sbjct: 578 VINSGKFLILDRMLPELKKRGHKVLLFSQMTSMLDILMDYCHLRNFNFSRLDGSMSYSER 637 Query: 98 PCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 + +N + ++ + + G G+NL + ++ + W+ + Q +R Sbjct: 638 ERNMHSFNTDPEVFIFLVSTRAGGLGINLT-AADTVIIYDSDWNPQSDLQAQDRC----- 691 Query: 157 RQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 + G + V VY L+ NTID+ +++R K ++ L++ Sbjct: 692 HRIGQTKPVVVYRLVTANTIDQKIVERAAAKRKLEKLII 730 >gi|328778981|ref|XP_001121991.2| PREDICTED: lymphoid-specific helicase-like [Apis mellifera] Length = 379 Score = 102 bits (254), Expect = 4e-20, Method: Composition-based stats. Identities = 31/160 (19%), Positives = 63/160 (39%), Gaps = 19/160 (11%) Query: 50 EVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQKA-----FPQGRT-----LDKD 97 K+ L+ ++ + +++ L ++ F R L Sbjct: 169 VTSSGKLLVLDAMLARLKKQGHKVLLFSTMTMILDVIEDYLSLRDFKYVRLDGSIKLSVR 228 Query: 98 PCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 IQ +N +I L + G GLNL G + ++ + W+ + Q + R Sbjct: 229 KENIQNFNTNPEIFLFLISTRAGGVGLNL-IGADTVIIYDSDWNPQVDIQAMARC----- 282 Query: 157 RQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + G R V +Y L + TIDE+++ R K ++ ++++ Sbjct: 283 HRIGQTRPVMIYKLCTKGTIDEVIINRAEAKRLLEKVVIS 322 >gi|292498|gb|AAA80560.1| transcription activator [Homo sapiens] Length = 769 Score = 102 bits (254), Expect = 4e-20, Method: Composition-based stats. Identities = 43/242 (17%), Positives = 90/242 (37%), Gaps = 52/242 (21%) Query: 1 MKQY---HKFQRELYCDLQGENIEAFNSASKTVK------CLQL---ANGAVYYD----- 43 +K Y K QRE Y + ++I+ NS+ K K +QL N +D Sbjct: 413 IKIYLGLSKMQREWYTKILMKDIDVLNSSGKMDKMRLLNILMQLRKCCNHPYLFDGAEPG 472 Query: 44 ---EEKHWKEVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQ---------KAFP 89 + K+ L+ ++ K + +++ L L+ Sbjct: 473 PPYTTDEHIVSNSGKMVVLDKLLAKLKEQGSRVLIFSQMTRLLDILEDYCMWRGYEYCRL 532 Query: 90 QGRTLDKDPCT-------------IQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVF 134 G+T ++ I+ +N + + G G+NL ++++ Sbjct: 533 DGQTPHEEREDKFLEVEFLGQREAIEAFNAPNSSKFIFMLSTRAGGLGINL-ASADVVIL 591 Query: 135 FSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 + W+ + Q ++R + G K+ V V+ LI NT++E +++R K + ++ Sbjct: 592 YDSDWNPQVDLQAMDR-----AHRIGQKKPVRVFRLITDNTVEERIVERAEIKLRLDSIV 646 Query: 195 LN 196 + Sbjct: 647 IQ 648 >gi|190346518|gb|EDK38617.2| hypothetical protein PGUG_02715 [Meyerozyma guilliermondii ATCC 6260] Length = 1155 Score = 102 bits (254), Expect = 4e-20, Method: Composition-based stats. Identities = 37/163 (22%), Positives = 61/163 (37%), Gaps = 27/163 (16%) Query: 53 DEKIKAL----EVIIEKANAAPIIVAYHFNSDLARLQKAFP------------QGRTL-D 95 KI+AL + I E++ ++V F+S L ++ GR Sbjct: 978 SSKIQALILHLQQIQEQSPGERVVVFSQFSSYLDLIENELKVQGSDIFHVVKFDGRLKMH 1037 Query: 96 KDPCTIQEWNEGK----IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERI 151 + I+ +N + +L + G GLNL + WW Q I+RI Sbjct: 1038 ERNQLIESFNNDDTSPRVSILLLSLKAGGVGLNLT-SASRAFMMDPWWSPSVEDQAIDRI 1096 Query: 152 GVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 + G R V V I Q +I+E +L+ K I + + Sbjct: 1097 -----HRIGQVRNVKVTRFIIQESIEEKMLKIQERKKQIGEAV 1134 >gi|320034447|gb|EFW16391.1| SNF2 family ATP-dependent chromatin-remodeling factor snf21 [Coccidioides posadasii str. Silveira] Length = 869 Score = 102 bits (254), Expect = 4e-20, Method: Composition-based stats. Identities = 26/169 (15%), Positives = 62/169 (36%), Gaps = 19/169 (11%) Query: 44 EEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQK----------AFPQG 91 + K+ L+ ++ + +++ F + L LQ Sbjct: 618 DIDESLVTASGKMLLLDRLVPCLLSKGHKVLIFSQFKTQLDILQDWAYLRNWNCCRIDGA 677 Query: 92 RTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 + I +N + + + G G+NL + ++ + W+ ++ Q Sbjct: 678 VSQADRQAQINAFNADPDYKIFLLSTRAGGLGINLT-AADTVILYDSDWNPQQDLQA--- 733 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 R + G + V VY L + T+++ +L+R +K ++ L++ K Sbjct: 734 --QDRAHRIGQTKPVIVYRLATRGTVEQTLLERADSKRRLEKLVIQKGK 780 >gi|58261190|ref|XP_568005.1| hypothetical protein [Cryptococcus neoformans var. neoformans JEC21] gi|134115795|ref|XP_773611.1| hypothetical protein CNBI2250 [Cryptococcus neoformans var. neoformans B-3501A] gi|74682377|sp|Q5K8T2|SWR1_CRYNE RecName: Full=Helicase SWR1 gi|50256237|gb|EAL18964.1| hypothetical protein CNBI2250 [Cryptococcus neoformans var. neoformans B-3501A] gi|57230087|gb|AAW46488.1| conserved hypothetical protein [Cryptococcus neoformans var. neoformans JEC21] Length = 1246 Score = 102 bits (254), Expect = 4e-20, Method: Composition-based stats. Identities = 28/155 (18%), Positives = 65/155 (41%), Gaps = 19/155 (12%) Query: 55 KIKALEVIIEK--ANAAPIIVAYHFNSDLARL---------QKAFPQGRTLDKDPCTI-Q 102 K++ L ++ + +++ L L + G T +D + + Sbjct: 939 KLQKLFEMLRDLKSEGHRVLIFTQMTRVLDILEMFLSHNGHRYLRLDGSTKIEDRQVLTE 998 Query: 103 EWNEG-KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGF 161 +N +I + A S G G+NL G + + F+ W+ ++R + R + G Sbjct: 999 RFNSDSRIFVFIASSRSGGVGINLT-GADTVFFYDSDWNPS-----MDRQCMDRAHRIGQ 1052 Query: 162 KRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 R V +Y ++ +T++E +L++ K + +++ Sbjct: 1053 TREVHIYRFVSSHTVEENMLRKAEQKRLLDKMVIQ 1087 >gi|238489253|ref|XP_002375864.1| SNF2 family helicase/ATPase PasG, putative [Aspergillus flavus NRRL3357] gi|220698252|gb|EED54592.1| SNF2 family helicase/ATPase PasG, putative [Aspergillus flavus NRRL3357] Length = 819 Score = 102 bits (254), Expect = 4e-20, Method: Composition-based stats. Identities = 33/163 (20%), Positives = 65/163 (39%), Gaps = 20/163 (12%) Query: 51 VHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQK----------AFPQGRTLDKDP 98 K+ L+ ++ + AN I++ F S L LQ G D Sbjct: 577 TASGKMLLLDRLVARLLANGHKILIFSQFKSQLDILQDWATQLRSWNCCRIDGAISQTDR 636 Query: 99 CT-IQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 I+ +N + + + G G+NL + ++ F W+ ++ Q R Sbjct: 637 RDQIKAFNTDPDYKIFLLSTRAGGQGINL-MAADTVILFDSDWNPQQDLQA-----QDRA 690 Query: 157 RQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 + G R V VY L + T+++ +L++ +K ++ L++ K Sbjct: 691 HRIGQTRPVIVYRLATKGTVEQTLLEKADSKRRLERLVIQKGK 733 >gi|312374256|gb|EFR21846.1| hypothetical protein AND_16272 [Anopheles darlingi] Length = 1024 Score = 102 bits (254), Expect = 4e-20, Method: Composition-based stats. Identities = 44/222 (19%), Positives = 87/222 (39%), Gaps = 37/222 (16%) Query: 6 KFQRELYCDLQGENIEAFNSASKTVK------CLQL---ANGAVYYD--EEKHWKEV--- 51 K QRE Y + ++I+ N A K K +QL N +D E Sbjct: 369 KMQREWYTKILMKDIDVVNGAGKVEKMRLQNILMQLRKCTNHPYLFDGAEPGPPYTTDYH 428 Query: 52 ---HDEKIKALEVIIEKANAA--PIIVAYHFNSDLARLQ---------KAFPQGRTLDKD 97 + K+ L+ ++ K +++ L L+ G+T +D Sbjct: 429 LLENSGKMVVLDKLLRKLQEQESRVLIFSQMTRMLDILEDFCHWRGYHYCRLDGQTPHED 488 Query: 98 -PCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 I ++N + + G G+NL ++++ + W+ + Q ++R Sbjct: 489 RSNMIADYNAPDSKKFIFMLSTRAGGLGINL-ATADVVIIYDSDWNPQMDLQAMDR---- 543 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + G K+ V V+ LI +NT++E +++R K + L++ Sbjct: 544 -AHRIGQKKQVRVFRLITENTVEEKIVERAEVKLKLDKLVIQ 584 >gi|302837688|ref|XP_002950403.1| hypothetical protein VOLCADRAFT_74566 [Volvox carteri f. nagariensis] gi|300264408|gb|EFJ48604.1| hypothetical protein VOLCADRAFT_74566 [Volvox carteri f. nagariensis] Length = 684 Score = 102 bits (254), Expect = 4e-20, Method: Composition-based stats. Identities = 32/163 (19%), Positives = 64/163 (39%), Gaps = 23/163 (14%) Query: 52 HDEKIKALEVIIEK-----ANAAPIIVAYHFNSDLARLQK-----------AFPQGRTLD 95 H K+ AL ++ ++ ++V S L +++ Sbjct: 432 HSPKLAALRDLLATCGGGNSSGHRMLVFAQHKSLLDIVERDLMAPYGVSYLRLDGSVEAG 491 Query: 96 KDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 +Q +N + I +L G GLNL + +VF W+ + Q ++R Sbjct: 492 ARFGIVQRFNSDPTIDVLLLTTGVGGVGLNLT-SADTVVFLEHDWNPMKDMQAMDR---- 546 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + G +R V VY ++ + T++E V+ + K + ++NA Sbjct: 547 -AHRLGQRRTVNVYRILTRGTLEERVMGLQQFKIDVAAAVVNA 588 >gi|303318669|ref|XP_003069334.1| SNF2 family N-terminal domain containing protein [Coccidioides posadasii C735 delta SOWgp] gi|240109020|gb|EER27189.1| SNF2 family N-terminal domain containing protein [Coccidioides posadasii C735 delta SOWgp] Length = 869 Score = 102 bits (254), Expect = 4e-20, Method: Composition-based stats. Identities = 26/169 (15%), Positives = 62/169 (36%), Gaps = 19/169 (11%) Query: 44 EEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQK----------AFPQG 91 + K+ L+ ++ + +++ F + L LQ Sbjct: 618 DIDESLVTASGKMLLLDRLVPCLLSKGHKVLIFSQFKTQLDILQDWAYLRNWNCCRIDGA 677 Query: 92 RTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 + I +N + + + G G+NL + ++ + W+ ++ Q Sbjct: 678 VSQADRQAQINAFNADPDYKIFLLSTRAGGLGINLT-AADTVILYDSDWNPQQDLQA--- 733 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 R + G + V VY L + T+++ +L+R +K ++ L++ K Sbjct: 734 --QDRAHRIGQTKPVIVYRLATRGTVEQTLLERADSKRRLEKLVIQKGK 780 >gi|168042528|ref|XP_001773740.1| SNF2 family chromodomain-helicase [Physcomitrella patens subsp. patens] gi|162674996|gb|EDQ61497.1| SNF2 family chromodomain-helicase [Physcomitrella patens subsp. patens] Length = 1791 Score = 102 bits (254), Expect = 4e-20, Method: Composition-based stats. Identities = 28/193 (14%), Positives = 66/193 (34%), Gaps = 24/193 (12%) Query: 15 LQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVA 74 L ++ + ++ A+G + + V D+ + L+ +++ Sbjct: 1013 LCDGLEDSLTAKLRSNANDSNASGNLLQNSSGKMILV-DKLLPKLKD-----AGRRVLIF 1066 Query: 75 YHFNSDLARLQKAFP---------QGRTLDKDPCT-IQEW--NEGKIPLLFAHPASCGHG 122 F L L+ G+ + I + + I + + G G Sbjct: 1067 SQFTIMLDLLEDYMIMKGYSYERIDGKIRGSERQAAIDRYSAKDSDIFVFLLSTRAGGLG 1126 Query: 123 LNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQ 182 + L + + + W+ + Q + R + G + V +Y LI +NT +E + + Sbjct: 1127 ITLT-AADTCIIYDSDWNPQNDLQAMARC-----HRIGQTKDVKIYRLITRNTYEERLFE 1180 Query: 183 RLRTKSTIQDLLL 195 K + + +L Sbjct: 1181 CSSRKYGLDEAIL 1193 >gi|21071044|ref|NP_003060.2| probable global transcription activator SNF2L1 isoform a [Homo sapiens] gi|115311627|sp|P28370|SMCA1_HUMAN RecName: Full=Probable global transcription activator SNF2L1; AltName: Full=ATP-dependent helicase SMARCA1; AltName: Full=Nucleosome-remodeling factor subunit SNF2L; AltName: Full=SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 1 gi|57208177|emb|CAI42683.1| SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1 [Homo sapiens] gi|57208838|emb|CAI42613.1| SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1 [Homo sapiens] gi|109658918|gb|AAI17448.1| SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1 [Homo sapiens] gi|119632240|gb|EAX11835.1| SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, isoform CRA_c [Homo sapiens] Length = 1054 Score = 102 bits (254), Expect = 4e-20, Method: Composition-based stats. Identities = 43/242 (17%), Positives = 90/242 (37%), Gaps = 52/242 (21%) Query: 1 MKQY---HKFQRELYCDLQGENIEAFNSASKTVK------CLQL---ANGAVYYD----- 43 +K Y K QRE Y + ++I+ NS+ K K +QL N +D Sbjct: 413 IKIYLGLSKMQREWYTKILMKDIDVLNSSGKMDKMRLLNILMQLRKCCNHPYLFDGAEPG 472 Query: 44 ---EEKHWKEVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQ---------KAFP 89 + K+ L+ ++ K + +++ L L+ Sbjct: 473 PPYTTDEHIVSNSGKMVVLDKLLAKLKEQGSRVLIFSQMTRLLDILEDYCMWRGYEYCRL 532 Query: 90 QGRTLDKDPCT-------------IQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVF 134 G+T ++ I+ +N + + G G+NL ++++ Sbjct: 533 DGQTPHEEREDKFLEVEFLGQREAIEAFNAPNSSKFIFMLSTRAGGLGINL-ASADVVIL 591 Query: 135 FSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 + W+ + Q ++R + G K+ V V+ LI NT++E +++R K + ++ Sbjct: 592 YDSDWNPQVDLQAMDR-----AHRIGQKKPVRVFRLITDNTVEERIVERAEIKLRLDSIV 646 Query: 195 LN 196 + Sbjct: 647 IQ 648 >gi|82595847|ref|XP_726017.1| nucleotide excision repair protein [Plasmodium yoelii yoelii str. 17XNL] gi|23481248|gb|EAA17582.1| similar nucleotide excision repair proteins-related [Plasmodium yoelii yoelii] Length = 818 Score = 102 bits (254), Expect = 4e-20, Method: Composition-based stats. Identities = 31/169 (18%), Positives = 65/169 (38%), Gaps = 24/169 (14%) Query: 52 HDEKIKALEVIIEK---ANAAPIIVAYHFNSDLARLQKAFPQGRTL-----------DKD 97 KI+A+ ++ ++ + S L ++ + + ++ Sbjct: 646 TSTKIEAIFEEVQNVIYNTDDKCLIFSQYCSMLDLIEYHLKKNNIICSKLLGYMSMVSRN 705 Query: 98 PCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 N+ ++ +L + G GLNLQ N + WW+ Q I+R Sbjct: 706 NILYNFNNDKQLRVLLISLKAGGEGLNLQV-ANRIFIVDPWWNPAAELQAIQR-----AH 759 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL----NALKKET 202 + G + V+ I +NT++E ++Q K + D + +A++K T Sbjct: 760 RIGQTKTVYAIRFIIENTVEEKIIQLQNKKQLVFDCTIGNSGSAMQKLT 808 >gi|297492405|ref|XP_002699560.1| PREDICTED: SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1 [Bos taurus] gi|296471282|gb|DAA13397.1| SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1 [Bos taurus] Length = 1057 Score = 102 bits (254), Expect = 4e-20, Method: Composition-based stats. Identities = 44/242 (18%), Positives = 90/242 (37%), Gaps = 52/242 (21%) Query: 1 MKQY---HKFQRELYCDLQGENIEAFNSASKTVK------CLQL---ANGAVYYD----- 43 +K Y K QRE Y + ++I+ NSA K K +QL N +D Sbjct: 416 IKIYLGLSKMQREWYTKILMKDIDVLNSAGKMDKMRLLNILMQLRKCCNHPYLFDGAEPG 475 Query: 44 ---EEKHWKEVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQ---------KAFP 89 + K+ L+ ++ K + +++ L L+ Sbjct: 476 PPYTTDEHIVSNSGKMVVLDKLLAKLKEQGSRVLIFSQMTRLLDILEDYCMWRGYEYCRL 535 Query: 90 QGRTLDKDPCT-------------IQEWN--EGKIPLLFAHPASCGHGLNLQYGGNILVF 134 G+T ++ I+ +N + + G G+NL ++++ Sbjct: 536 DGQTPHEEREDKFLEVELLGQREAIEAFNIPNSSKFIFMLSTRAGGLGINL-ASADVVIL 594 Query: 135 FSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 + W+ + Q ++R + G K+ V V+ LI NT++E +++R K + ++ Sbjct: 595 YDSDWNPQVDLQAMDR-----AHRIGQKKPVRVFRLITDNTVEERIVERAEIKLRLDSIV 649 Query: 195 LN 196 + Sbjct: 650 IQ 651 >gi|158295468|ref|XP_001688808.1| AGAP006165-PB [Anopheles gambiae str. PEST] gi|157016052|gb|EDO63814.1| AGAP006165-PB [Anopheles gambiae str. PEST] Length = 2856 Score = 102 bits (254), Expect = 4e-20, Method: Composition-based stats. Identities = 30/156 (19%), Positives = 65/156 (41%), Gaps = 19/156 (12%) Query: 55 KIKALEVIIEK--ANAAPIIVAYHFNSDLARLQ---------KAFPQGRTLDKDPCTI-- 101 K++ L+ +++K + +++ L L+ G T + + Sbjct: 1728 KLQTLDRLLKKLKSEGHRVLIFTQMTRMLDVLEAFLNYHGHIYLRLDGTTKVEQRQVLME 1787 Query: 102 QEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGF 161 + N+ ++ S G G+NL G + ++F+ W+ Q +R + G Sbjct: 1788 RFNNDRRMFAFILSTRSGGVGINLT-GADTVIFYDSDWNPTMDAQAQDRC-----HRIGQ 1841 Query: 162 KRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 R V +Y L+++ TI+E +L++ K + DL + Sbjct: 1842 TRDVHIYRLVSEKTIEENILKKANQKRILGDLAIEG 1877 >gi|57208178|emb|CAI42684.1| SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1 [Homo sapiens] gi|57208839|emb|CAI42614.1| SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1 [Homo sapiens] Length = 1005 Score = 102 bits (254), Expect = 4e-20, Method: Composition-based stats. Identities = 43/242 (17%), Positives = 90/242 (37%), Gaps = 52/242 (21%) Query: 1 MKQY---HKFQRELYCDLQGENIEAFNSASKTVK------CLQL---ANGAVYYD----- 43 +K Y K QRE Y + ++I+ NS+ K K +QL N +D Sbjct: 392 IKIYLGLSKMQREWYTKILMKDIDVLNSSGKMDKMRLLNILMQLRKCCNHPYLFDGAEPG 451 Query: 44 ---EEKHWKEVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQ---------KAFP 89 + K+ L+ ++ K + +++ L L+ Sbjct: 452 PPYTTDEHIVSNSGKMVVLDKLLAKLKEQGSRVLIFSQMTRLLDILEDYCMWRGYEYCRL 511 Query: 90 QGRTLDKDPCT-------------IQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVF 134 G+T ++ I+ +N + + G G+NL ++++ Sbjct: 512 DGQTPHEEREDKFLEVEFLGQREAIEAFNAPNSSKFIFMLSTRAGGLGINL-ASADVVIL 570 Query: 135 FSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 + W+ + Q ++R + G K+ V V+ LI NT++E +++R K + ++ Sbjct: 571 YDSDWNPQVDLQAMDR-----AHRIGQKKPVRVFRLITDNTVEERIVERAEIKLRLDSIV 625 Query: 195 LN 196 + Sbjct: 626 IQ 627 >gi|167517999|ref|XP_001743340.1| hypothetical protein [Monosiga brevicollis MX1] gi|163778439|gb|EDQ92054.1| predicted protein [Monosiga brevicollis MX1] Length = 927 Score = 102 bits (254), Expect = 4e-20, Method: Composition-based stats. Identities = 40/229 (17%), Positives = 81/229 (35%), Gaps = 40/229 (17%) Query: 2 KQY---HKFQRELYCDLQGENIEAFNSASKTVK------CLQL---ANGAVYYD--EEKH 47 K Y + QR+ Y + ++IEA N A K K +QL N +D E Sbjct: 302 KVYVGLSRMQRDWYKKILAKDIEAVNGAGKMEKMRLLNILMQLRKCCNHPYLFDGAEPGP 361 Query: 48 WKEVHDEKIKAL--------EVIIEKANAAPIIVAYHFNSDLARLQK----------AFP 89 I + + + +++ L L+ Sbjct: 362 PFTTDQHLIDNCGKMLVLDKLLKKLQEQGSRVLIFSQMTRMLDILEDYCWWRNYNYCRID 421 Query: 90 QGRTLDKDPCTIQEWN--EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQM 147 + D I E+N + + + G G+NL ++++ F W+ + Q Sbjct: 422 GSTSHDVRNEMIDEYNKENSEKFIFMLSTRAGGLGINL-ATADVVILFDSDWNPQMDLQA 480 Query: 148 IERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 R + G K+ V ++ LI + T++E ++++ K + +++ Sbjct: 481 -----QDRAHRIGQKKQVRIFRLITEGTVEERIVEKAEMKLRLDAMVIQ 524 >gi|126322473|ref|XP_001379449.1| PREDICTED: similar to RAD54B protein [Monodelphis domestica] Length = 1087 Score = 102 bits (254), Expect = 4e-20, Method: Composition-based stats. Identities = 31/171 (18%), Positives = 68/171 (39%), Gaps = 22/171 (12%) Query: 45 EKHWKEVHDEKIKALEVII----EKANAAPIIVAYHFNSDLARLQK----------AFPQ 90 + E K++ L ++ E + + +++ ++ L LQ Sbjct: 550 PNTFSETDSGKLQVLTKLLAAIRELSPSEKVVLVSNYTQTLNILQAVCTRHGYTCTRLDG 609 Query: 91 GRTLDKDPCTIQEWN--EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMI 148 + + + +N + + + G GLNL GG+ L+ + + W+ Q + Sbjct: 610 QTPVVQRQQIVDGFNCKHSSVFIFLLSSKAGGVGLNL-IGGSHLILYDIDWNPATDIQAM 668 Query: 149 ERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 R+ + G K +V +Y L+ TI+E + QR +K + +++ K Sbjct: 669 ARVW-----RDGQKHSVHIYRLLTTGTIEEKIYQRQISKQGLSGAVVDLAK 714 >gi|123468950|ref|XP_001317690.1| Type III restriction enzyme, res subunit family protein [Trichomonas vaginalis G3] gi|121900430|gb|EAY05467.1| Type III restriction enzyme, res subunit family protein [Trichomonas vaginalis G3] Length = 1439 Score = 101 bits (253), Expect = 4e-20, Method: Composition-based stats. Identities = 27/226 (11%), Positives = 67/226 (29%), Gaps = 38/226 (16%) Query: 3 QYHKFQRELYCDLQGENIEAFNSA----SKTVKCLQLANGAVYYDEEKHWKEVHDEKIKA 58 Y + +L + + + ++ ++ + + + + Sbjct: 581 LYRSLIEQKIPELAASDSSHRRALPELPNLAMQLRKVCCHPYLIQDYEKIIGDVLQGMSE 640 Query: 59 LEVIIEKAN---------------AAPIIVAYHFNSDLARLQK----------AFPQGRT 93 + +++ + I++ F L + + G Sbjct: 641 FDQLVKCSGKMVFVDKLLGKLHPLGKKILIFSQFKHVLDIISQFLDMRNYKYERIDGGSH 700 Query: 94 LDKDPCTIQEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERI 151 + + +N+ I + + G GLNL + ++ F W+ + Q R Sbjct: 701 GNDRQKKMDRFNDPTQDIFVFLLSTRAGGLGLNLT-AADTVIIFDSDWNPQNDVQAQARC 759 Query: 152 GVTRQRQAGFK-RAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + G V VY LI + T + + R K + +L+ Sbjct: 760 -----HRIGQTAEKVVVYRLITRGTYESEMFDRASKKLGLDQAVLD 800 >gi|115472329|ref|NP_001059763.1| Os07g0511500 [Oryza sativa Japonica Group] gi|113611299|dbj|BAF21677.1| Os07g0511500 [Oryza sativa Japonica Group] Length = 635 Score = 101 bits (253), Expect = 4e-20, Method: Composition-based stats. Identities = 28/156 (17%), Positives = 56/156 (35%), Gaps = 21/156 (13%) Query: 52 HDEKIKALEV----IIEKANAAPIIVAYHFNSDLARLQKAFPQGRT----------LDKD 97 KI AL ++E +A IV F S L ++ + + + + Sbjct: 462 TSTKIDALREEIRNMVEHDGSAKGIVFSQFTSFLDLIEFSLQKSGIKCVQLNGKMNIVEK 521 Query: 98 PCTIQEW-NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 I + N+ + + G LNL + + WW+ Q +RI Sbjct: 522 GKAIDTFTNDPDCRIFLMSLKAGGVALNLTVASH-VFLMDPWWNPAVESQAQDRI----- 575 Query: 157 RQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQD 192 + G + + + ++T++E +LQ K + + Sbjct: 576 HRIGQFKPIRSMRFVIKDTVEERILQLQEKKRLVFE 611 >gi|50509490|dbj|BAD31171.1| putative DNA repair protein rhp16 [Oryza sativa Japonica Group] Length = 569 Score = 101 bits (253), Expect = 4e-20, Method: Composition-based stats. Identities = 28/156 (17%), Positives = 56/156 (35%), Gaps = 21/156 (13%) Query: 52 HDEKIKALEV----IIEKANAAPIIVAYHFNSDLARLQKAFPQGRT----------LDKD 97 KI AL ++E +A IV F S L ++ + + + + Sbjct: 396 TSTKIDALREEIRNMVEHDGSAKGIVFSQFTSFLDLIEFSLQKSGIKCVQLNGKMNIVEK 455 Query: 98 PCTIQEW-NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 I + N+ + + G LNL + + WW+ Q +RI Sbjct: 456 GKAIDTFTNDPDCRIFLMSLKAGGVALNLTVASH-VFLMDPWWNPAVESQAQDRI----- 509 Query: 157 RQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQD 192 + G + + + ++T++E +LQ K + + Sbjct: 510 HRIGQFKPIRSMRFVIKDTVEERILQLQEKKRLVFE 545 >gi|327271091|ref|XP_003220321.1| PREDICTED: DNA repair and recombination protein RAD54-like [Anolis carolinensis] Length = 906 Score = 101 bits (253), Expect = 4e-20, Method: Composition-based stats. Identities = 33/160 (20%), Positives = 65/160 (40%), Gaps = 23/160 (14%) Query: 53 DEKIKALEVII----EKANAAPIIVAYHFNSDLARLQK----------AFPQGRTLDKDP 98 K+ L+ I+ +N ++V ++ L +K ++ K Sbjct: 657 SGKMLVLDYILAVTKSTSNDKVVLV-SNYTQTLDLFEKLCRNRRYLYVRLDGTMSIKKRA 715 Query: 99 CTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 ++ +N P + + G GLNL G N LV F W+ +Q + R+ Sbjct: 716 KVVEHFNSVSSPEFIFMLSSKAGGCGLNL-IGANRLVMFDPDWNPANDEQAMARVW---- 770 Query: 157 RQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + G K+ ++Y L++ TI+E + QR K + +++ Sbjct: 771 -RDGQKKTCYIYRLLSTGTIEEKIFQRQTHKKALSSCVVD 809 >gi|63991035|gb|AAY40920.1| unknown [Homo sapiens] Length = 367 Score = 101 bits (253), Expect = 4e-20, Method: Composition-based stats. Identities = 42/230 (18%), Positives = 86/230 (37%), Gaps = 40/230 (17%) Query: 1 MKQY---HKFQRELYCDLQGENIEAFNSASKTVK------CLQL--ANGAVYYDEEKHW- 48 +K Y K QRE Y + ++I+ NSA K K +QL Y + Sbjct: 143 VKIYVGLSKMQREWYTRILMKDIDILNSAGKMDKMRLLNILMQLRKCCNHPYLFDGAEPG 202 Query: 49 --------KEVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQ---------KAFP 89 + K+ L+ ++ K + +++ L L+ Sbjct: 203 PPYTTDMHLVTNSGKMVVLDKLLPKLKEQGSRVLIFSQMTRVLDILEDYCMWRNYEYCRL 262 Query: 90 QGRTLDKDPCT-IQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 G+T + I +NE + + G G+NL ++++ + W+ + Q Sbjct: 263 DGQTPHDERQDSINAYNEPNSTKFVFMLSTRAGGLGINL-ATADVVILYDSDWNPQVDLQ 321 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 ++R + G + V V+ I NT++E +++R K + +++ Sbjct: 322 AMDR-----AHRIGQTKTVRVFRFITDNTVEERIVERAEMKLRLDSIVIQ 366 >gi|194205835|ref|XP_001502330.2| PREDICTED: helicase, lymphoid-specific isoform 2 [Equus caballus] Length = 808 Score = 101 bits (253), Expect = 4e-20, Method: Composition-based stats. Identities = 24/149 (16%), Positives = 55/149 (36%), Gaps = 19/149 (12%) Query: 58 ALEVIIEKANAAPIIVAYHFNSDLARLQK----------AFPQGRTLDKDPCTIQEWN-E 106 L + K +++ L L + + + +N + Sbjct: 577 MLPEL--KTRGHKVLLFSQMTRMLDILMDYCHFRDFNFSRLDGSMSYSEREKNMHNFNTD 634 Query: 107 GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVF 166 + + + G G+NL + ++ + W+ + Q +R + G + V Sbjct: 635 PDVFIFLVSTRAGGLGINLT-AADTVIIYDSDWNPQSDLQAQDRC-----HRIGQTKPVV 688 Query: 167 VYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 VY L+ NTID+ +++R K ++ L++ Sbjct: 689 VYRLVTANTIDQKIVERAAAKRKLEKLII 717 >gi|119489243|ref|XP_001262873.1| SNF2 family helicase/ATPase (Swr1), putative [Neosartorya fischeri NRRL 181] gi|119411031|gb|EAW20976.1| SNF2 family helicase/ATPase (Swr1), putative [Neosartorya fischeri NRRL 181] Length = 1695 Score = 101 bits (253), Expect = 4e-20, Method: Composition-based stats. Identities = 30/166 (18%), Positives = 68/166 (40%), Gaps = 19/166 (11%) Query: 44 EEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAF---------PQGR 92 +K + K++ L+ ++ A ++ L L++ G Sbjct: 1368 PDKRLLQYDCGKLQRLDKLLRDLKAGGHRALIFTQMTKMLDILEQFLNIHGHRYLRLDGT 1427 Query: 93 TLDKDPCTI--QEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 T + + + N+ +I + S G G+NL G + ++F+ L W+ +Q +R Sbjct: 1428 TKVEQRQILTDRFNNDDRILVFILSSRSGGLGINLT-GADTVIFYDLDWNPAMDKQCQDR 1486 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + G R V +Y +++ TI+ +L++ K + D+++ Sbjct: 1487 C-----HRIGQTRDVHIYRFVSEYTIESNILRKANQKRMLDDVVIQ 1527 >gi|254567481|ref|XP_002490851.1| DNA-dependent ATPase [Pichia pastoris GS115] gi|238030647|emb|CAY68571.1| DNA-dependent ATPase [Pichia pastoris GS115] gi|328351234|emb|CCA37634.1| DNA repair and recombination protein RAD54B [Pichia pastoris CBS 7435] Length = 840 Score = 101 bits (253), Expect = 4e-20, Method: Composition-based stats. Identities = 40/150 (26%), Positives = 63/150 (42%), Gaps = 20/150 (13%) Query: 59 LEVIIEKANAAPIIVAYHFNSDLARLQ---------KAFPQGRTLDKDPCTIQEWNE--- 106 L + E N +IV +F L LQ G + +D ++++NE Sbjct: 548 LRKLFETTNEKCVIV-SNFTKTLDVLQLIIEHNNWKYHRLDGSSKGRD-KIVRDFNESPQ 605 Query: 107 GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVF 166 ++ + G GLNL G + L+ F W+ Q + R+ + G KR F Sbjct: 606 KDRFIMLLSSKAGGVGLNL-IGASRLILFDNDWNPSVDIQAMARV-----HRDGQKRHTF 659 Query: 167 VYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 +Y L + TIDE +LQR K + D L+ Sbjct: 660 IYRLYTKGTIDEKILQRQLMKQNLSDKFLD 689 >gi|159039139|ref|YP_001538392.1| non-specific serine/threonine protein kinase [Salinispora arenicola CNS-205] gi|157917974|gb|ABV99401.1| Non-specific serine/threonine protein kinase [Salinispora arenicola CNS-205] Length = 1074 Score = 101 bits (253), Expect = 4e-20, Method: Composition-based stats. Identities = 32/211 (15%), Positives = 67/211 (31%), Gaps = 24/211 (11%) Query: 2 KQYHKFQRELYCDLQGEN-IEAFN-SASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKAL 59 Y ++ ++ + IE + + Q+ N + K+ L Sbjct: 843 ALYRAVVDDMLAQIESSDGIERRGLVLAAMTRLKQVCNHPAQLLRDGSALAGRSGKLARL 902 Query: 60 EVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRT-------------LDKDPCTIQEW 104 E +++ A ++ + ++ + + R D+D + Sbjct: 903 EETLDEVLAAGEKALLFTQY-AEFGGMLRGHLSARFGRETLFLHGGVGKADRDAMVTRFQ 961 Query: 105 NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA 164 PL + G GL L N +V WW+ Q +R + G +R Sbjct: 962 ATDGPPLFVLSLKAGGTGLTLT-AANHVVHVDRWWNPAVEDQATDR-----AFRIGQQRR 1015 Query: 165 VFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 V V + T++E V + K + ++ Sbjct: 1016 VQVRKFVCAGTVEEKVAALIADKRRLASTVV 1046 >gi|261404317|ref|YP_003240558.1| SNF2-like protein [Paenibacillus sp. Y412MC10] gi|261280780|gb|ACX62751.1| SNF2-related protein [Paenibacillus sp. Y412MC10] Length = 986 Score = 101 bits (253), Expect = 4e-20, Method: Composition-based stats. Identities = 32/192 (16%), Positives = 70/192 (36%), Gaps = 29/192 (15%) Query: 27 SKTVK--CLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLA 82 + K +L G D E K++ L ++++ ++ + Sbjct: 779 ALLTKEPLPELPGGGGLLDTEAVVNR--SAKLERLLSMVKELRDEGERCLIFTQYIGMGE 836 Query: 83 RLQK----------AFPQGRTLDKDP-CTIQEWNEGKIP------LLFAHPASCGHGLNL 125 +++ + G T + I+++ +P ++ + G GLNL Sbjct: 837 MMRQVLHQELGEPVLYLNGSTPKRTRDRMIEQFQSQTLPPEEQPNVMILSIKAGGVGLNL 896 Query: 126 QYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLR 185 N + F WW+ Q +R + G + V VY I+ T++E + + L Sbjct: 897 T-AANHVFHFDRWWNPAVENQATDR-----AYRMGQTKDVQVYKFISMGTLEERIDEMLE 950 Query: 186 TKSTIQDLLLNA 197 +K + D ++ + Sbjct: 951 SKQQLSDQVIAS 962 >gi|115734945|ref|XP_001199537.1| PREDICTED: similar to HELLS protein, partial [Strongylocentrotus purpuratus] gi|115902055|ref|XP_792190.2| PREDICTED: similar to HELLS protein, partial [Strongylocentrotus purpuratus] Length = 132 Score = 101 bits (253), Expect = 4e-20, Method: Composition-based stats. Identities = 24/136 (17%), Positives = 57/136 (41%), Gaps = 17/136 (12%) Query: 71 IIVAYHFNSDLARLQK----------AFPQGRTLDKDPCTIQEWN-EGKIPLLFAHPASC 119 +++ F + L L+ +L+ ++E+N + L + Sbjct: 1 VLIFSQFTTMLDILEDFCHMRSHQYCRLDGTTSLEDRQERMKEFNSNPDVFLFLLSTRAG 60 Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 G G+NL + ++ + W+ + Q +R + G + V +Y L+ NTID+ Sbjct: 61 GLGINLT-AADTVIIYDSDWNPQSDLQAQDRC-----HRIGQTKPVVIYRLVTANTIDQR 114 Query: 180 VLQRLRTKSTIQDLLL 195 +++R K ++ +++ Sbjct: 115 IVERAAAKRKLEKMVI 130 >gi|222637121|gb|EEE67253.1| hypothetical protein OsJ_24412 [Oryza sativa Japonica Group] Length = 953 Score = 101 bits (253), Expect = 4e-20, Method: Composition-based stats. Identities = 28/156 (17%), Positives = 56/156 (35%), Gaps = 21/156 (13%) Query: 52 HDEKIKALEV----IIEKANAAPIIVAYHFNSDLARLQKAFPQGRT----------LDKD 97 KI AL ++E +A IV F S L ++ + + + + Sbjct: 780 TSTKIDALREEIRNMVEHDGSAKGIVFSQFTSFLDLIEFSLQKSGIKCVQLNGKMNIVEK 839 Query: 98 PCTIQEW-NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 I + N+ + + G LNL + + WW+ Q +RI Sbjct: 840 GKAIDTFTNDPDCRIFLMSLKAGGVALNLTVASH-VFLMDPWWNPAVESQAQDRI----- 893 Query: 157 RQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQD 192 + G + + + ++T++E +LQ K + + Sbjct: 894 HRIGQFKPIRSMRFVIKDTVEERILQLQEKKRLVFE 929 >gi|296412613|ref|XP_002836017.1| hypothetical protein [Tuber melanosporum Mel28] gi|295629817|emb|CAZ80174.1| unnamed protein product [Tuber melanosporum] Length = 591 Score = 101 bits (253), Expect = 4e-20, Method: Composition-based stats. Identities = 27/174 (15%), Positives = 65/174 (37%), Gaps = 20/174 (11%) Query: 44 EEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQK-----------AFPQ 90 E K+ LE ++ A +++ F L +++ Sbjct: 333 EPDERLVTVSGKMMLLERLVPALFARGHKVLIFSQFTKMLDIIEEWAVTLRHWPVCRIDG 392 Query: 91 GRTLDKDPCTIQEWNEGK-IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIE 149 G + I+ +N+ + + + G G+NL + ++ F W+ ++ Q Sbjct: 393 GIKQEDRREHIRRFNKDEGWNIFLLSTRAGGLGINLT-AADTVILFDSDWNPQQDLQA-- 449 Query: 150 RIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETI 203 R + G K+ V +Y T+++ +L++ K ++ L++ K ++ Sbjct: 450 ---QDRAHRIGQKKPVIIYRFATAATVEQTILEKADGKRRLEKLVIQKGKFRSV 500 >gi|109090004|ref|XP_001095698.1| PREDICTED: lymphoid-specific helicase isoform 13 [Macaca mulatta] Length = 837 Score = 101 bits (253), Expect = 4e-20, Method: Composition-based stats. Identities = 24/159 (15%), Positives = 61/159 (38%), Gaps = 19/159 (11%) Query: 50 EVHDEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQK----------AFPQGRTLDKD 97 + K L+ ++ + +++ S L L + + Sbjct: 594 VTNSGKFLILDRMLPELKKRGHKVLLFSQMTSMLDILMDYCHLRDFNFSRLDGSMSYSER 653 Query: 98 PCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 + +N + ++ + + G G+NL + ++ + W+ + Q +R Sbjct: 654 EKNMHSFNMDPEVFIFLVSTRAGGLGINLT-AADTVIIYDSDWNPQSDLQAQDRC----- 707 Query: 157 RQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 + G + V VY L+ NT+D+ +++R K ++ L++ Sbjct: 708 HRIGQTKPVVVYRLVTANTVDQKIVERAAAKRKLEKLII 746 >gi|194214970|ref|XP_001915028.1| PREDICTED: similar to DNA repair and recombination protein RAD54B (RAD54 homolog B) [Equus caballus] Length = 910 Score = 101 bits (253), Expect = 4e-20, Method: Composition-based stats. Identities = 32/166 (19%), Positives = 65/166 (39%), Gaps = 22/166 (13%) Query: 50 EVHDEKIKALEVII----EKANAAPIIVAYHFNSDLARLQK----------AFPQGRTLD 95 E K++ L ++ E A +++ ++ L LQ+ + Sbjct: 638 EEESGKLQVLSKLLAVIRELCPAEKVVLVSNYTQTLNILQEVCKRHGYAYTRLDGQTPVS 697 Query: 96 KDPCTIQEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGV 153 + + +N + + G GLNL GG+ L+ + + W+ Q + R+ Sbjct: 698 QRQQIVDSFNSKYSSDFIFLLSSKAGGVGLNL-IGGSHLILYDIDWNPATDIQAMSRVW- 755 Query: 154 TRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 + G K V +Y L+ TI+E + QR +K + +++ K Sbjct: 756 ----RDGQKHPVHIYRLLTTGTIEEKIYQRQISKQDLSGAVVDLTK 797 >gi|293347259|ref|XP_001054095.2| PREDICTED: similar to RAD54B homolog isoform 1; RAD54, S. cerevisiae, homolog of, B [Rattus norvegicus] Length = 888 Score = 101 bits (253), Expect = 4e-20, Method: Composition-based stats. Identities = 33/167 (19%), Positives = 68/167 (40%), Gaps = 22/167 (13%) Query: 50 EVHDEKIKALEVIIEKANA----APIIVAYHFNSDLARLQK---------AFPQGRT-LD 95 E K++ L ++ + +I+ ++ L L++ A G+T + Sbjct: 618 ESESGKLQVLVKLLAAISELRPTEKVILVSNYRQTLNLLEEVCKCHGYACARLDGQTPVS 677 Query: 96 KDPCTIQEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGV 153 + + +N + + G GLNL GG+ L+ + + W+ Q + R+ Sbjct: 678 QRQQIVDNFNSKYSTDFIFLLSSKAGGVGLNL-IGGSHLILYDIDWNPATDIQAMARVW- 735 Query: 154 TRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKK 200 + G K V VY L+ TI+E + QR +K + +++ + Sbjct: 736 ----RDGQKHPVHVYRLLTTGTIEEKIYQRQISKQGLSGAVVDLTRS 778 >gi|149045437|gb|EDL98437.1| similar to RAD54B homolog isoform 1; RAD54, S. cerevisiae, homolog of, B (predicted), isoform CRA_b [Rattus norvegicus] Length = 819 Score = 101 bits (253), Expect = 4e-20, Method: Composition-based stats. Identities = 33/167 (19%), Positives = 68/167 (40%), Gaps = 22/167 (13%) Query: 50 EVHDEKIKALEVIIEKANA----APIIVAYHFNSDLARLQK---------AFPQGRT-LD 95 E K++ L ++ + +I+ ++ L L++ A G+T + Sbjct: 549 ESESGKLQVLVKLLAAISELRPTEKVILVSNYRQTLNLLEEVCKCHGYACARLDGQTPVS 608 Query: 96 KDPCTIQEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGV 153 + + +N + + G GLNL GG+ L+ + + W+ Q + R+ Sbjct: 609 QRQQIVDNFNSKYSTDFIFLLSSKAGGVGLNL-IGGSHLILYDIDWNPATDIQAMARVW- 666 Query: 154 TRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKK 200 + G K V VY L+ TI+E + QR +K + +++ + Sbjct: 667 ----RDGQKHPVHVYRLLTTGTIEEKIYQRQISKQGLSGAVVDLTRS 709 >gi|300795783|ref|NP_001178684.1| RAD54 homolog B [Rattus norvegicus] Length = 888 Score = 101 bits (253), Expect = 4e-20, Method: Composition-based stats. Identities = 33/167 (19%), Positives = 68/167 (40%), Gaps = 22/167 (13%) Query: 50 EVHDEKIKALEVIIEKANA----APIIVAYHFNSDLARLQK---------AFPQGRT-LD 95 E K++ L ++ + +I+ ++ L L++ A G+T + Sbjct: 618 ESESGKLQVLVKLLAAISELRPTEKVILVSNYRQTLNLLEEVCKCHGYACARLDGQTPVS 677 Query: 96 KDPCTIQEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGV 153 + + +N + + G GLNL GG+ L+ + + W+ Q + R+ Sbjct: 678 QRQQIVDNFNSKYSTDFIFLLSSKAGGVGLNL-IGGSHLILYDIDWNPATDIQAMARVW- 735 Query: 154 TRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKK 200 + G K V VY L+ TI+E + QR +K + +++ + Sbjct: 736 ----RDGQKHPVHVYRLLTTGTIEEKIYQRQISKQGLSGAVVDLTRS 778 >gi|119173620|ref|XP_001239222.1| hypothetical protein CIMG_10244 [Coccidioides immitis RS] Length = 970 Score = 101 bits (253), Expect = 4e-20, Method: Composition-based stats. Identities = 29/165 (17%), Positives = 68/165 (41%), Gaps = 19/165 (11%) Query: 45 EKHWKEVH--DEKIKALEVIIEKANAAPIIVAYHFNSDLARL-----QKAFPQGR----- 92 EK W+ D+ ++ L I N I+ F + L L ++ + R Sbjct: 786 EKSWQTSSKIDKALEILREIESCNNGEKTIIFSQFTTLLDLLEVPIMREGWHYRRYDGSM 845 Query: 93 -TLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERI 151 + ++ ++ + ++ + GLNL + ++ F +W+ +Q I+R Sbjct: 846 SPIQRNEAVLEFSDNENCKIMLVSLKAGNAGLNL-VAASQVIIFDPFWNPYIEEQAIDR- 903 Query: 152 GVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + G R V V+ ++ ++T+++ +L+ K + + L+ Sbjct: 904 ----AHRIGQIRPVMVHRILVRDTVEDRILELQEKKRELIENALD 944 >gi|313226776|emb|CBY21921.1| unnamed protein product [Oikopleura dioica] Length = 1356 Score = 101 bits (253), Expect = 4e-20, Method: Composition-based stats. Identities = 32/167 (19%), Positives = 65/167 (38%), Gaps = 20/167 (11%) Query: 44 EEKHWKEVHDEKIKALEVIIEKA---NAAPIIVAYHFNSDLARLQK----------AFPQ 90 E + K++ L +I + N ++ L L++ Sbjct: 940 PETRLIQYDCGKLQTLHDLIYQKLRPNGHRALIFTQMTKMLDVLERFLSYHALTYSRLDG 999 Query: 91 GRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIE 149 +K ++ +N + KI + S G G+NL G + ++F+ W+ Q Sbjct: 1000 STAPEKRIQIMETFNRDPKIFCMILSTRSGGVGVNLT-GADTVIFYDSDWNPTIDAQA-- 1056 Query: 150 RIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 R + G R V +Y IA++TI+E +L++ K + ++ + Sbjct: 1057 ---QDRAHRIGQTRDVHIYRFIAKDTIEENILKKANYKRKLGNVAIE 1100 >gi|146418040|ref|XP_001484986.1| hypothetical protein PGUG_02715 [Meyerozyma guilliermondii ATCC 6260] Length = 1155 Score = 101 bits (253), Expect = 4e-20, Method: Composition-based stats. Identities = 37/163 (22%), Positives = 61/163 (37%), Gaps = 27/163 (16%) Query: 53 DEKIKAL----EVIIEKANAAPIIVAYHFNSDLARLQKAFP------------QGRTL-D 95 KI+AL + I E++ ++V F+S L ++ GR Sbjct: 978 SSKIQALILHLQQIQEQSPGERVVVFSQFSSYLDLIENELKVQGSDIFHVVKFDGRLKMH 1037 Query: 96 KDPCTIQEWNEGK----IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERI 151 + I+ +N + +L + G GLNL + WW Q I+RI Sbjct: 1038 ERNQLIESFNNDDTSPRVSILLLSLKAGGVGLNLT-SASRAFMMDPWWSPSVEDQAIDRI 1096 Query: 152 GVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 + G R V V I Q +I+E +L+ K I + + Sbjct: 1097 -----HRIGQVRNVKVTRFIIQESIEEKMLKIQERKKQIGEAV 1134 >gi|296120640|ref|YP_003628418.1| SNF2-related protein [Planctomyces limnophilus DSM 3776] gi|296012980|gb|ADG66219.1| SNF2-related protein [Planctomyces limnophilus DSM 3776] Length = 674 Score = 101 bits (253), Expect = 4e-20, Method: Composition-based stats. Identities = 41/205 (20%), Positives = 76/205 (37%), Gaps = 27/205 (13%) Query: 4 YHKFQRELYCDLQ--GENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEV 61 Y ++E L G++I + ++ Q+ N K LE Sbjct: 446 YDTAEKEGVIQLNEMGDSISIQHVFELVLRLKQITNW--------DPLTGESAKFDRLEA 497 Query: 62 IIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTLD---------KDPCTIQEWNEGKIP 110 +E+ A+ I+ + L L++ + L ++P Q + Sbjct: 498 DMEEVAASGGKAILFSQWTKTLDFLKEKLERFGPLVYHGGIPNKLREPVLKQFKEDPTKH 557 Query: 111 LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYL 170 ++ A+ GLNLQ+ G + + WW+ Q I R + G K V V Sbjct: 558 IILMSYATGAVGLNLQFAG-YVFLYDRWWNPAIEDQAINR-----AHRIGCKSQVIVTRF 611 Query: 171 IAQNTIDELVLQRLRTKSTIQDLLL 195 I+++TI+E + + L K + +L Sbjct: 612 ISKDTIEEKIDRVLTEKRELFRAIL 636 >gi|224143281|ref|XP_002324903.1| chromatin remodeling complex subunit [Populus trichocarpa] gi|222866337|gb|EEF03468.1| chromatin remodeling complex subunit [Populus trichocarpa] Length = 1334 Score = 101 bits (253), Expect = 5e-20, Method: Composition-based stats. Identities = 29/166 (17%), Positives = 61/166 (36%), Gaps = 20/166 (12%) Query: 52 HDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQ---------KAFPQGRTLDKDPCT 100 K++ L ++ + +++ F L L+ G+ + Sbjct: 607 TSGKLQLLHKMMVRLKEQGHRVLIYSQFQHMLDLLEDYCTHKKWTYERIDGKVGGAERQI 666 Query: 101 -IQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 I +N + G G+NL + ++ + W+ Q + R Sbjct: 667 RIDRFNAKNSSRFCFLLSTRAGGLGINL-ATADTVIIYDSDWNPHADLQAMAR-----AH 720 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETI 203 + G V +Y LI + TI+E ++Q + K ++ L++ LK + I Sbjct: 721 RLGQTNKVMIYRLITRGTIEERMMQMTKKKMVLEHLVVGRLKAQNI 766 >gi|168012162|ref|XP_001758771.1| SNF2 family DNA-dependent ATPase [Physcomitrella patens subsp. patens] gi|162689908|gb|EDQ76277.1| SNF2 family DNA-dependent ATPase [Physcomitrella patens subsp. patens] Length = 1211 Score = 101 bits (253), Expect = 5e-20, Method: Composition-based stats. Identities = 37/189 (19%), Positives = 71/189 (37%), Gaps = 28/189 (14%) Query: 15 LQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEK--ANAAPII 72 L E+I+A + + ++ G V DE+ KI L +++ A + Sbjct: 713 LDAEDIQAAEAMTHSLA------GMVQDDED---MSATSCKIDFLMALLDNLVAEGHRTL 763 Query: 73 VAYHFNSDLARLQKAFPQG-----------RTLDKDPCTIQEWNEGKIPLLFAHPASCGH 121 + L +Q + + D++ C + ++ +IPL G Sbjct: 764 IFAQTRKMLNIIQDEILERGWIFRRIDGTIKAADRELCVQEFQSDDEIPLFLLTSQVGGL 823 Query: 122 GLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVL 181 GL L G + +V W+ Q ++R + G K V +Y L+ TI+E + Sbjct: 824 GLTLT-GADRVVIVDPAWNPSTDNQSVDR-----AYRIGQKNDVVIYRLMTCGTIEEKIY 877 Query: 182 QRLRTKSTI 190 ++ K + Sbjct: 878 RKQVFKGHL 886 >gi|330864739|ref|NP_001178471.1| SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1 [Bos taurus] Length = 1051 Score = 101 bits (253), Expect = 5e-20, Method: Composition-based stats. Identities = 44/242 (18%), Positives = 90/242 (37%), Gaps = 52/242 (21%) Query: 1 MKQY---HKFQRELYCDLQGENIEAFNSASKTVK------CLQL---ANGAVYYD----- 43 +K Y K QRE Y + ++I+ NSA K K +QL N +D Sbjct: 416 IKIYLGLSKMQREWYTKILMKDIDVLNSAGKMDKMRLLNILMQLRKCCNHPYLFDGAEPG 475 Query: 44 ---EEKHWKEVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQ---------KAFP 89 + K+ L+ ++ K + +++ L L+ Sbjct: 476 PPYTTDEHIVSNSGKMVVLDKLLAKLKEQGSRVLIFSQMTRLLDILEDYCMWRGYEYCRL 535 Query: 90 QGRTLDKDPCT-------------IQEWN--EGKIPLLFAHPASCGHGLNLQYGGNILVF 134 G+T ++ I+ +N + + G G+NL ++++ Sbjct: 536 DGQTPHEEREDKFLEVELLGQREAIEAFNIPNSSKFIFMLSTRAGGLGINL-ASADVVIL 594 Query: 135 FSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 + W+ + Q ++R + G K+ V V+ LI NT++E +++R K + ++ Sbjct: 595 YDSDWNPQVDLQAMDR-----AHRIGQKKPVRVFRLITDNTVEERIVERAEIKLRLDSIV 649 Query: 195 LN 196 + Sbjct: 650 IQ 651 >gi|303324355|ref|XP_003072165.1| SNF2 family N-terminal domain containing protein [Coccidioides posadasii C735 delta SOWgp] gi|240111875|gb|EER30020.1| SNF2 family N-terminal domain containing protein [Coccidioides posadasii C735 delta SOWgp] gi|320037193|gb|EFW19131.1| SWI/SNF family DNA-dependent ATPase Ris1 [Coccidioides posadasii str. Silveira] Length = 988 Score = 101 bits (253), Expect = 5e-20, Method: Composition-based stats. Identities = 29/165 (17%), Positives = 68/165 (41%), Gaps = 19/165 (11%) Query: 45 EKHWKEVH--DEKIKALEVIIEKANAAPIIVAYHFNSDLARL-----QKAFPQGR----- 92 EK W+ D+ ++ L I N I+ F + L L ++ + R Sbjct: 804 EKSWQTSSKIDKALEILREIESCNNGEKTIIFSQFTTLLDLLEVPIMREGWHYRRYDGSM 863 Query: 93 -TLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERI 151 + ++ ++ + ++ + GLNL + ++ F +W+ +Q I+R Sbjct: 864 SPIQRNEAVLEFSDNENCKIMLVSLKAGNAGLNL-VAASQVIIFDPFWNPYIEEQAIDR- 921 Query: 152 GVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + G R V V+ ++ ++T+++ +L+ K + + L+ Sbjct: 922 ----AHRIGQIRPVMVHRILVRDTVEDRILELQEKKRELIENALD 962 >gi|149035611|gb|EDL90292.1| rCG50332, isoform CRA_c [Rattus norvegicus] Length = 568 Score = 101 bits (253), Expect = 5e-20, Method: Composition-based stats. Identities = 33/168 (19%), Positives = 68/168 (40%), Gaps = 23/168 (13%) Query: 45 EKHWKEVHDEKIKALEVII----EKANAAPIIVAYHFNSDLARLQK----------AFPQ 90 K + K+ L+ I+ +++ ++V ++ L +K Sbjct: 307 SKAVEPQLSGKMLVLDYILAMTRSRSSDKVVLV-SNYTQTLDLFEKLCRARRYLYVRLDG 365 Query: 91 GRTLDKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMI 148 ++ K ++ +N P + + G GLNL G N LV F W+ +Q + Sbjct: 366 TMSIKKRAKVVERFNSPSSPDFVFMLSSKAGGCGLNL-IGANRLVMFDPDWNPANDEQAM 424 Query: 149 ERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 R+ + G K+ ++Y L++ TI+E + QR K + +++ Sbjct: 425 ARVW-----RDGQKKICYIYRLLSAGTIEEKIFQRQSHKKALSSCVVD 467 >gi|297674406|ref|XP_002815220.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5-like, partial [Pongo abelii] Length = 816 Score = 101 bits (253), Expect = 5e-20, Method: Composition-based stats. Identities = 42/230 (18%), Positives = 86/230 (37%), Gaps = 40/230 (17%) Query: 1 MKQY---HKFQRELYCDLQGENIEAFNSASKTVK------CLQL--ANGAVYYDEEKHW- 48 +K Y K QRE Y + ++I+ NSA K K +QL Y + Sbjct: 410 VKIYVGLSKMQREWYTRILMKDIDILNSAGKMDKMRLLNILMQLRKCCNHPYLFDGAEPG 469 Query: 49 --------KEVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQ---------KAFP 89 + K+ L+ ++ K + +++ L L+ Sbjct: 470 PPYTTDMHLVTNSGKMVVLDKLLPKLKEQGSRVLIFSQMTRVLDILEDYCMWRNYEYCRL 529 Query: 90 QGRTLDKDPCT-IQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 G+T + I +NE + + G G+NL ++++ + W+ + Q Sbjct: 530 DGQTPHDERQDSINAYNEPNSTKFVFMLSTRAGGLGINL-ATADVVILYDSDWNPQVDLQ 588 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 ++R + G + V V+ I NT++E +++R K + +++ Sbjct: 589 AMDR-----AHRIGQTKTVRVFRFITDNTVEERIVERAEMKLRLDSIVIQ 633 >gi|297304754|ref|XP_002806437.1| PREDICTED: probable global transcription activator SNF2L1-like [Macaca mulatta] gi|119632241|gb|EAX11836.1| SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, isoform CRA_d [Homo sapiens] gi|219520696|gb|AAI43955.1| SMARCA1 protein [Homo sapiens] Length = 1070 Score = 101 bits (253), Expect = 5e-20, Method: Composition-based stats. Identities = 43/242 (17%), Positives = 90/242 (37%), Gaps = 52/242 (21%) Query: 1 MKQY---HKFQRELYCDLQGENIEAFNSASKTVK------CLQL---ANGAVYYD----- 43 +K Y K QRE Y + ++I+ NS+ K K +QL N +D Sbjct: 413 IKIYLGLSKMQREWYTKILMKDIDVLNSSGKMDKMRLLNILMQLRKCCNHPYLFDGAEPG 472 Query: 44 ---EEKHWKEVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQ---------KAFP 89 + K+ L+ ++ K + +++ L L+ Sbjct: 473 PPYTTDEHIVSNSGKMVVLDKLLAKLKEQGSRVLIFSQMTRLLDILEDYCMWRGYEYCRL 532 Query: 90 QGRTLDKDPCT-------------IQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVF 134 G+T ++ I+ +N + + G G+NL ++++ Sbjct: 533 DGQTPHEEREDKFLEVEFLGQREAIEAFNAPNSSKFIFMLSTRAGGLGINL-ASADVVIL 591 Query: 135 FSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 + W+ + Q ++R + G K+ V V+ LI NT++E +++R K + ++ Sbjct: 592 YDSDWNPQVDLQAMDR-----AHRIGQKKPVRVFRLITDNTVEERIVERAEIKLRLDSIV 646 Query: 195 LN 196 + Sbjct: 647 IQ 648 >gi|302308737|ref|NP_985767.2| AFR220Wp [Ashbya gossypii ATCC 10895] gi|299790770|gb|AAS53591.2| AFR220Wp [Ashbya gossypii ATCC 10895] Length = 1085 Score = 101 bits (253), Expect = 5e-20, Method: Composition-based stats. Identities = 42/189 (22%), Positives = 78/189 (41%), Gaps = 31/189 (16%) Query: 25 SASKTVKCLQL--ANGAV----YYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFN 78 +A ++ L+L NG + Y + +K K V I+ L+ + + + ++V F+ Sbjct: 881 AAVESRYLLKLEDINGKLEPVPYSNTKKSSKIV--ALIRHLKHLQDTSANEQVVVFSQFS 938 Query: 79 SDLARLQKAFPQ-------------GRT-LDKDPCTIQEWNEG---KIPLLFAHPASCGH 121 S L L+ Q GR L + + ++ E K+ +L + G Sbjct: 939 SYLDILENELRQSFASDICEIYKFDGRLDLKERSNVLAKFTEKSLVKMKVLLLSLKAGGV 998 Query: 122 GLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVL 181 GLNL + + WW Q ++RI + G V +Y I +N+I+E +L Sbjct: 999 GLNLTCASHAFIM-DPWWSPGMEDQAMDRI-----HRIGQSNTVKIYRFIVENSIEEKML 1052 Query: 182 QRLRTKSTI 190 + K ++ Sbjct: 1053 RIQEKKRSL 1061 >gi|74692796|sp|Q753V5|RAD5_ASHGO RecName: Full=DNA repair protein RAD5 Length = 1085 Score = 101 bits (253), Expect = 5e-20, Method: Composition-based stats. Identities = 42/189 (22%), Positives = 78/189 (41%), Gaps = 31/189 (16%) Query: 25 SASKTVKCLQL--ANGAV----YYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFN 78 +A ++ L+L NG + Y + +K K V I+ L+ + + + ++V F+ Sbjct: 881 AAVESRYLLKLEDINGKLEPVPYSNTKKSSKIV--ALIRHLKHLQDTSANEQVVVFSQFS 938 Query: 79 SDLARLQKAFPQ-------------GRT-LDKDPCTIQEWNEG---KIPLLFAHPASCGH 121 S L L+ Q GR L + + ++ E K+ +L + G Sbjct: 939 SYLDILENELRQSFASDICEIYKFDGRLDLKERSNVLAKFTEKSLVKMKVLLLSLKAGGV 998 Query: 122 GLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVL 181 GLNL + + WW Q ++RI + G V +Y I +N+I+E +L Sbjct: 999 GLNLTCASHAFIM-DPWWSPGMEDQAMDRI-----HRIGQSNTVKIYRFIVENSIEEKML 1052 Query: 182 QRLRTKSTI 190 + K ++ Sbjct: 1053 RIQEKKRSL 1061 >gi|255555479|ref|XP_002518776.1| DNA repair and recombination protein RAD54B, putative [Ricinus communis] gi|223542157|gb|EEF43701.1| DNA repair and recombination protein RAD54B, putative [Ricinus communis] Length = 940 Score = 101 bits (253), Expect = 5e-20, Method: Composition-based stats. Identities = 35/166 (21%), Positives = 68/166 (40%), Gaps = 24/166 (14%) Query: 45 EKHWKEVHDEKIKALEVII----EKANAAPIIVAYHFNSDLARLQK----------AFPQ 90 + W E+ K+ L ++ ++ + ++V ++ L + Sbjct: 536 DGSWIEL-SGKMHVLARLLAHLRQRTDDRIVLV-SNYTQTLDLFAQLCRERRYPHLRLDG 593 Query: 91 GRTLDKDPCTIQEWNE--GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMI 148 ++ K + +N+ + + G GLNL GGN LV F W+ +Q Sbjct: 594 ATSIGKRQKLVNRFNDQSKDEFVFLLSSKAGGCGLNL-IGGNRLVLFDPDWNPANDKQAA 652 Query: 149 ERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 RI + G K+ V++Y ++ TI+E V QR +K +Q ++ Sbjct: 653 ARIW-----RDGQKKRVYIYRFLSTGTIEEKVYQRQMSKEGLQKVI 693 >gi|154303896|ref|XP_001552354.1| hypothetical protein BC1G_08832 [Botryotinia fuckeliana B05.10] gi|150854416|gb|EDN29608.1| hypothetical protein BC1G_08832 [Botryotinia fuckeliana B05.10] Length = 612 Score = 101 bits (253), Expect = 5e-20, Method: Composition-based stats. Identities = 29/170 (17%), Positives = 68/170 (40%), Gaps = 23/170 (13%) Query: 46 KHWKEVHDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQ-----KAFPQGR------ 92 K+W+ K ++E + I+ F + L LQ K + R Sbjct: 436 KNWQ--SSGKTDKCVELLEKFQNEGEKTIIFSQFVTFLDLLQVPIGEKGWKCERYDGSIN 493 Query: 93 TLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIG 152 + +D + ++ ++ + GLNL + ++ +W+ Q ++R Sbjct: 494 SKRRDEAIKRFQDKPDCNIMLISLKAGNAGLNLT-AASRVIILDPFWNPFIEMQAVDR-- 550 Query: 153 VTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN--ALKK 200 + G + V V+ ++ Q T+++ +++ R K ++ + L+ A+K Sbjct: 551 ---AYRIGQMKTVQVHRILVQETVEDRIMELQRQKKSLVESALDEGAMKS 597 >gi|119473011|ref|XP_001258467.1| SWI/SNF family DNA-dependent ATPase Ris1, putative [Neosartorya fischeri NRRL 181] gi|119406619|gb|EAW16570.1| SWI/SNF family DNA-dependent ATPase Ris1, putative [Neosartorya fischeri NRRL 181] Length = 1276 Score = 101 bits (253), Expect = 5e-20, Method: Composition-based stats. Identities = 30/165 (18%), Positives = 69/165 (41%), Gaps = 19/165 (11%) Query: 45 EKHWKEVH--DEKIKALEVIIEKANAAPIIVAYHFNSDLARLQ----------KAFPQG- 91 EK W ++ ++ L+ I ++ ++ I+ F S L L+ + + Sbjct: 1085 EKTWVTSAKIEKTLEILQEIQDREDSEKTIIFSQFTSLLDLLEVPIVRRGWGYRRYDGSM 1144 Query: 92 RTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERI 151 R D++ ++ + ++ + GLNL + ++ F +W+ Q I+R Sbjct: 1145 RPGDRNAAVLEFTDNPDCKIMLVSLKAGNAGLNL-VAASQVIIFDPFWNPYIEDQAIDR- 1202 Query: 152 GVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + G R V ++ ++ Q T+++ +L+ K + D L+ Sbjct: 1203 ----AHRIGQMRQVHIHRILVQKTVEDRILELQEKKREVIDGALD 1243 >gi|190345413|gb|EDK37294.2| hypothetical protein PGUG_01392 [Meyerozyma guilliermondii ATCC 6260] Length = 888 Score = 101 bits (253), Expect = 5e-20, Method: Composition-based stats. Identities = 33/142 (23%), Positives = 61/142 (42%), Gaps = 19/142 (13%) Query: 68 AAPIIVAYHFNSDLARLQKAFPQ---------GRTLDKDP-CTIQEWNEGK---IPLLFA 114 +++ ++ L L+++ + G T +K+ + ++N+ + Sbjct: 614 GEKVVLVSNYTQTLKLLEQSVNKLNMKSLRLDGTTANKERDKLVNQFNKSSAESTMIFLL 673 Query: 115 HPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQN 174 + G GLNL G + L+ F W+ Q + RI + G KR VF+Y L+ Sbjct: 674 SAKAGGVGLNL-VGASRLILFDNDWNPSVDLQAMARI-----HRDGQKRPVFIYRLLTTG 727 Query: 175 TIDELVLQRLRTKSTIQDLLLN 196 IDE + QR K+ + D L+ Sbjct: 728 CIDEKIFQRQLMKNNLSDKFLD 749 >gi|73998070|ref|XP_859242.1| PREDICTED: similar to helicase, lymphoid-specific isoform 3 [Canis familiaris] Length = 386 Score = 101 bits (253), Expect = 5e-20, Method: Composition-based stats. Identities = 26/153 (16%), Positives = 58/153 (37%), Gaps = 19/153 (12%) Query: 58 ALEVIIEKANAAPIIVAYHFNSDLARLQK----------AFPQGRTLDKDPCTIQEWN-E 106 L + KA +++ L L + + + +N + Sbjct: 242 MLPEL--KARGHKVLLFSQMTRMLDILMDYCHFRNFNFSRLDGSMSYSEREKNMHSFNTD 299 Query: 107 GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVF 166 + + + G G+NL + ++ + W+ + Q +R + G + V Sbjct: 300 PDVFIFLVSTRAGGLGINLT-AADTVIIYDSDWNPQSDLQAQDRC-----HRIGQTKPVV 353 Query: 167 VYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 VY L+ NTID+ +++R K ++ L+++ K Sbjct: 354 VYRLVTANTIDQKIVERAAAKRKLEKLIIHKSK 386 >gi|296080908|emb|CBI18752.3| unnamed protein product [Vitis vinifera] Length = 1187 Score = 101 bits (253), Expect = 5e-20, Method: Composition-based stats. Identities = 31/166 (18%), Positives = 64/166 (38%), Gaps = 23/166 (13%) Query: 42 YDEEKHWKEVHDEKIKALEVIIEKAN------AAPIIVAYHFNSDLARLQKAFP----QG 91 +D + KI+A +++ + IV + L L+ Q Sbjct: 1000 HDPCPESRLYDSSKIRAALEVLQSLSKPRDLVGEKAIVFSQWTRMLDLLESCLKNSSIQY 1059 Query: 92 RTLDKD------PCTIQEWNE-GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEH 144 R LD ++++N ++ ++ + GLN+ ++L+ LWW+ Sbjct: 1060 RRLDGTMSVVARDKAVKDFNTLPEVSVMIMSLKAASLGLNMVAACHVLLL-DLWWNPTTE 1118 Query: 145 QQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 Q I+R + G R V V L ++T+++ +L + K + Sbjct: 1119 DQAIDR-----AHRIGQTRPVTVLRLTVKDTVEDRILALQQKKREM 1159 >gi|119570423|gb|EAW50038.1| helicase, lymphoid-specific, isoform CRA_m [Homo sapiens] Length = 874 Score = 101 bits (253), Expect = 5e-20, Method: Composition-based stats. Identities = 24/149 (16%), Positives = 59/149 (39%), Gaps = 18/149 (12%) Query: 58 ALEVIIEKANAAPIIVAYHFNSDLARLQK----------AFPQGRTLDKDPCTIQEWN-E 106 L + ++ + +++ S L L + + + +N + Sbjct: 607 MLPELKKRGHKV-VLLFSQMTSMLDILMDYCHLRDFNFSRLDGSMSYSEREKNMHSFNTD 665 Query: 107 GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVF 166 ++ + + G G+NL + ++ + W+ + Q +R + G + V Sbjct: 666 PEVFIFLVSTRAGGLGINLT-AADTVIIYDSDWNPQSDLQAQDRC-----HRIGQTKPVV 719 Query: 167 VYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 VY L+ NTID+ +++R K ++ L++ Sbjct: 720 VYRLVTANTIDQKIVERAAAKRKLEKLII 748 >gi|296226943|ref|XP_002759149.1| PREDICTED: DNA repair and recombination protein RAD54B [Callithrix jacchus] Length = 910 Score = 101 bits (253), Expect = 5e-20, Method: Composition-based stats. Identities = 30/166 (18%), Positives = 65/166 (39%), Gaps = 22/166 (13%) Query: 50 EVHDEKIKALEVIIEKANA----APIIVAYHFNSDLARLQK----------AFPQGRTLD 95 E K++ L ++ + +++ ++ L LQ+ + Sbjct: 639 EKESGKLQVLSKLLAVIHELRPTERVVLVSNYTQTLNILQEVCKRHGYAYTRLDGQTPIS 698 Query: 96 KDPCTIQEWNE--GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGV 153 + + +N + + + G GLNL GG+ L+ + + W+ Q + R+ Sbjct: 699 QRQQIVDGFNSQHSSVFIFLLSSKAGGVGLNL-IGGSHLILYDIDWNPATDIQAMSRVW- 756 Query: 154 TRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 + G K V +Y L+ TI+E + QR +K + +++ K Sbjct: 757 ----RDGQKHPVHIYRLLTTGTIEEKIYQRQISKQGLCGAVVDLTK 798 >gi|156545712|ref|XP_001604847.1| PREDICTED: similar to PASG [Nasonia vitripennis] Length = 1193 Score = 101 bits (253), Expect = 5e-20, Method: Composition-based stats. Identities = 32/199 (16%), Positives = 71/199 (35%), Gaps = 23/199 (11%) Query: 13 CDLQGENIEAFNSASKTVKCLQ--LANGAVYYDEEKHWKEVHDEKIKALEVIIEKA--NA 68 L G ++ + + L + Y +E K KI L+ +++K N Sbjct: 587 LKLSGNDVTMYRHVVNHPYLIHYPLTDAGDYKVDENIIK--ASGKILVLDALLKKLYKNG 644 Query: 69 APIIVAYHFNSDLARLQK----------AFPQGRTLDKDPCTIQEWN-EGKIPLLFAHPA 117 +++ L ++ D +I + ++ L Sbjct: 645 HKVLLFSTMTMVLDVIEDYLSLRGFKYVRLDGAVAYDDRKDSIDSFQKNPEVFLFLLTTK 704 Query: 118 SCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 + GLNL + ++ + W+ + Q + R + G + V VY L + T+D Sbjct: 705 AGAVGLNL-AAADTVIIYDSDWNPQNDLQAMARC-----HRIGQTKPVAVYRLCTKGTVD 758 Query: 178 ELVLQRLRTKSTIQDLLLN 196 E +++R K ++ +++ Sbjct: 759 EAIIKRANAKRFLEKAVIS 777 >gi|322492128|emb|CBZ27402.1| DNA repair and recombination protein RAD54,putative [Leishmania mexicana MHOM/GT/2001/U1103] Length = 1130 Score = 101 bits (252), Expect = 5e-20, Method: Composition-based stats. Identities = 29/151 (19%), Positives = 57/151 (37%), Gaps = 18/151 (11%) Query: 58 ALEVIIEKANAAPIIVAYHFNSDLARLQKA----------FPQGRTLDKDPCTIQEWNEG 107 L+ + +++ +F L + + K + +N Sbjct: 806 VLDELKRNGEHDKLVIVSNFTQTLDIIAALCNSKQIAYFQLDGSTPIKKRQQLVDYFNVP 865 Query: 108 KIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 + + G GLNL G N L+ F W+ Q + R+ + G K+ V Sbjct: 866 GSQEVVFLLSSKAGGVGLNL-IGANRLILFDPDWNPANDAQAMGRVW-----RDGQKKRV 919 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 F+Y L++ TI+E + QR +K + +++ Sbjct: 920 FIYRLLSTGTIEEKIYQRQVSKQGLSANVVD 950 >gi|296236368|ref|XP_002807959.1| PREDICTED: LOW QUALITY PROTEIN: probable global transcription activator SNF2L1-like [Callithrix jacchus] Length = 1080 Score = 101 bits (252), Expect = 5e-20, Method: Composition-based stats. Identities = 43/242 (17%), Positives = 90/242 (37%), Gaps = 52/242 (21%) Query: 1 MKQY---HKFQRELYCDLQGENIEAFNSASKTVK------CLQL---ANGAVYYD----- 43 +K Y K QRE Y + ++I+ NS+ K K +QL N +D Sbjct: 413 IKIYLGLSKMQREWYTKILMKDIDVLNSSGKMDKMRLLNILMQLRKCCNHPYLFDGAEPG 472 Query: 44 ---EEKHWKEVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQ---------KAFP 89 + K+ L+ ++ K + +++ L L+ Sbjct: 473 PPYTTDEHIVSNSGKMVVLDKLLAKLKEQGSRVLIFSQMTRLLDILEDYCMWRGYEYCRL 532 Query: 90 QGRTLDKDPCT-------------IQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVF 134 G+T ++ I+ +N + + G G+NL ++++ Sbjct: 533 DGQTPHEEREDKFLEVEFRGQREAIEAFNAPNSSKFIFMLSTRAGGLGINL-ASADVVIL 591 Query: 135 FSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 + W+ + Q ++R + G K+ V V+ LI NT++E +++R K + ++ Sbjct: 592 YDSDWNPQVDLQAMDR-----AHRIGQKKPVRVFRLITDNTVEERIVERAEIKLRLDSIV 646 Query: 195 LN 196 + Sbjct: 647 IQ 648 >gi|290457487|emb|CBK19482.1| C. elegans protein Y116A8C.13b, partially confirmed by transcript evidence [Caenorhabditis elegans] Length = 720 Score = 101 bits (252), Expect = 5e-20, Method: Composition-based stats. Identities = 38/161 (23%), Positives = 69/161 (42%), Gaps = 21/161 (13%) Query: 53 DEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKA-----FPQGRTLDKDP-----CT 100 K+ AL +I+ + ++ ++ L +Q+ F R K Sbjct: 403 SGKLTALVDMIKCFRLLQECTVIVSNYIETLDMIQQLCEYLNFKVLRLDGKTQVPDRQKL 462 Query: 101 IQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQ 158 ++ +N+ + P + + G GLNL G + LV F W+ QQ + RI + Sbjct: 463 VRTFNDHRDPSNIFLLSTKAGGVGLNL-IGASRLVLFDSDWNPANDQQAMARIW-----R 516 Query: 159 AGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 G R +Y LI TI+E +LQR K+ + +++A++ Sbjct: 517 DGQVRPCHIYRLITTGTIEEKMLQRQIKKTGL-GCVIDAIE 556 >gi|71995707|ref|NP_503012.2| hypothetical protein Y116A8C.13 [Caenorhabditis elegans] gi|34556097|emb|CAB55149.2| C. elegans protein Y116A8C.13a, partially confirmed by transcript evidence [Caenorhabditis elegans] Length = 833 Score = 101 bits (252), Expect = 5e-20, Method: Composition-based stats. Identities = 38/161 (23%), Positives = 69/161 (42%), Gaps = 21/161 (13%) Query: 53 DEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKA-----FPQGRTLDKDP-----CT 100 K+ AL +I+ + ++ ++ L +Q+ F R K Sbjct: 516 SGKLTALVDMIKCFRLLQECTVIVSNYIETLDMIQQLCEYLNFKVLRLDGKTQVPDRQKL 575 Query: 101 IQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQ 158 ++ +N+ + P + + G GLNL G + LV F W+ QQ + RI + Sbjct: 576 VRTFNDHRDPSNIFLLSTKAGGVGLNL-IGASRLVLFDSDWNPANDQQAMARIW-----R 629 Query: 159 AGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 G R +Y LI TI+E +LQR K+ + +++A++ Sbjct: 630 DGQVRPCHIYRLITTGTIEEKMLQRQIKKTGL-GCVIDAIE 669 >gi|83767491|dbj|BAE57630.1| unnamed protein product [Aspergillus oryzae] Length = 1103 Score = 101 bits (252), Expect = 5e-20, Method: Composition-based stats. Identities = 31/165 (18%), Positives = 66/165 (40%), Gaps = 21/165 (12%) Query: 45 EKHWKEVHDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQ----------KAFPQG- 91 EK W V KI+ I+ + I+ F S L L+ + + Sbjct: 912 EKTW--VSSAKIEKAMDILRGIQEGEEKTIIFSQFTSLLDLLEVPIVRQGWGYRRYDGSM 969 Query: 92 RTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERI 151 + D++ + + ++ + GLNL + ++ F +W+ +Q I+R Sbjct: 970 KPGDRNSAVLDFTDSPDCKIILVSLKAGNSGLNL-VAASQVIIFDPFWNPYIEEQAIDR- 1027 Query: 152 GVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + G R V ++ ++ QNT+++ +L+ K + + L+ Sbjct: 1028 ----AHRIGQVREVQIHRILVQNTVEDRILELQDKKRELIEGALD 1068 >gi|119570411|gb|EAW50026.1| helicase, lymphoid-specific, isoform CRA_a [Homo sapiens] Length = 870 Score = 101 bits (252), Expect = 5e-20, Method: Composition-based stats. Identities = 24/149 (16%), Positives = 59/149 (39%), Gaps = 18/149 (12%) Query: 58 ALEVIIEKANAAPIIVAYHFNSDLARLQK----------AFPQGRTLDKDPCTIQEWN-E 106 L + ++ + +++ S L L + + + +N + Sbjct: 607 MLPELKKRGHKV-VLLFSQMTSMLDILMDYCHLRDFNFSRLDGSMSYSEREKNMHSFNTD 665 Query: 107 GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVF 166 ++ + + G G+NL + ++ + W+ + Q +R + G + V Sbjct: 666 PEVFIFLVSTRAGGLGINLT-AADTVIIYDSDWNPQSDLQAQDRC-----HRIGQTKPVV 719 Query: 167 VYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 VY L+ NTID+ +++R K ++ L++ Sbjct: 720 VYRLVTANTIDQKIVERAAAKRKLEKLII 748 >gi|300794189|ref|NP_001179884.1| RAD54 homolog B [Bos taurus] gi|297482525|ref|XP_002692864.1| PREDICTED: RAD54 homolog B (S. cerevisiae) [Bos taurus] gi|296480441|gb|DAA22556.1| RAD54 homolog B [Bos taurus] Length = 909 Score = 101 bits (252), Expect = 5e-20, Method: Composition-based stats. Identities = 32/166 (19%), Positives = 65/166 (39%), Gaps = 22/166 (13%) Query: 50 EVHDEKIKALEVII----EKANAAPIIVAYHFNSDLARLQK----------AFPQGRTLD 95 E K++ L ++ E A +++ ++ L LQ+ + Sbjct: 638 EEESGKLQVLSKLLAVIRELRPAEKVVLVSNYTRTLDILQEVCKRHGYAYTRLDGQTPIS 697 Query: 96 KDPCTIQEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGV 153 + + +N + + G GLNL GG+ L+ + + W+ Q + R+ Sbjct: 698 QRQQIVDGFNSKYSSDFIFLLSSKAGGVGLNL-IGGSHLILYDIDWNPATDIQAMSRVW- 755 Query: 154 TRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 + G K V +Y L+ TI+E + QR +K + +++ K Sbjct: 756 ----RDGQKHPVHIYRLLTTGTIEEKIYQRQISKQGLSGAVVDLSK 797 >gi|73999360|ref|XP_850491.1| PREDICTED: similar to DNA repair and recombination protein RAD54B (RAD54 homolog B) isoform 8 [Canis familiaris] Length = 912 Score = 101 bits (252), Expect = 5e-20, Method: Composition-based stats. Identities = 29/166 (17%), Positives = 64/166 (38%), Gaps = 22/166 (13%) Query: 50 EVHDEKIKALEVIIEKANA----APIIVAYHFNSDLARLQK----------AFPQGRTLD 95 E K++ L ++ + +++ ++ L LQ+ + Sbjct: 639 EEESGKLQVLLKLLAVIHELRPTEKVVLVSNYTQTLDILQEVCKRHGYTYTRLDGQTPVS 698 Query: 96 KDPCTIQEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGV 153 + + +N + + G GLNL GG+ L+ + + W+ Q + R+ Sbjct: 699 QRQQIVDSFNSKYSSDFIFLLSSKAGGVGLNL-IGGSHLILYDIDWNPATDIQAMSRVW- 756 Query: 154 TRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 + G K V +Y L+ TI+E + QR +K + +++ + Sbjct: 757 ----RDGQKNPVHIYRLLTTGTIEEKIYQRQISKQDLSGAVVDLTR 798 >gi|73999362|ref|XP_544181.2| PREDICTED: similar to DNA repair and recombination protein RAD54B (RAD54 homolog B) isoform 7 [Canis familiaris] Length = 892 Score = 101 bits (252), Expect = 5e-20, Method: Composition-based stats. Identities = 29/166 (17%), Positives = 64/166 (38%), Gaps = 22/166 (13%) Query: 50 EVHDEKIKALEVIIEKANA----APIIVAYHFNSDLARLQK----------AFPQGRTLD 95 E K++ L ++ + +++ ++ L LQ+ + Sbjct: 619 EEESGKLQVLLKLLAVIHELRPTEKVVLVSNYTQTLDILQEVCKRHGYTYTRLDGQTPVS 678 Query: 96 KDPCTIQEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGV 153 + + +N + + G GLNL GG+ L+ + + W+ Q + R+ Sbjct: 679 QRQQIVDSFNSKYSSDFIFLLSSKAGGVGLNL-IGGSHLILYDIDWNPATDIQAMSRVW- 736 Query: 154 TRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 + G K V +Y L+ TI+E + QR +K + +++ + Sbjct: 737 ----RDGQKNPVHIYRLLTTGTIEEKIYQRQISKQDLSGAVVDLTR 778 >gi|31874139|emb|CAD97978.1| hypothetical protein [Homo sapiens] gi|190689855|gb|ACE86702.1| helicase, lymphoid-specific protein [synthetic construct] gi|190691223|gb|ACE87386.1| helicase, lymphoid-specific protein [synthetic construct] Length = 822 Score = 101 bits (252), Expect = 5e-20, Method: Composition-based stats. Identities = 25/159 (15%), Positives = 61/159 (38%), Gaps = 19/159 (11%) Query: 50 EVHDEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQK----------AFPQGRTLDKD 97 + K L+ ++ + +++ S L L + + Sbjct: 579 VTNSGKFLILDRMLPELKKRGHKVLLFSQMTSMLDILMDYCHLRDFNFSRLNGSMSYSER 638 Query: 98 PCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 + +N + ++ + + G G+NL + ++ + W+ + Q +R Sbjct: 639 EKNMHSFNTDPEVFIFLVSTRAGGLGINLT-AADTVIIYDSDWNPQSDLQAQDRC----- 692 Query: 157 RQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 + G + V VY L+ NTID+ +++R K ++ L++ Sbjct: 693 HRIGQTKPVVVYRLVTANTIDQKIVERAAAKRKLEKLII 731 >gi|238492801|ref|XP_002377637.1| DNA repair protein Rhp26/Rad26, putative [Aspergillus flavus NRRL3357] gi|220696131|gb|EED52473.1| DNA repair protein Rhp26/Rad26, putative [Aspergillus flavus NRRL3357] Length = 1076 Score = 101 bits (252), Expect = 5e-20, Method: Composition-based stats. Identities = 32/163 (19%), Positives = 59/163 (36%), Gaps = 20/163 (12%) Query: 53 DEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQK-----------AFPQGRTLDKDPC 99 K++ ++ ++E K ++ L LQK + Sbjct: 632 SGKMQVVKSLLELWKDTGHKTLLFAQHRIMLDILQKFVESLSGFNYRRMDGTTPIAHRQS 691 Query: 100 TIQEWNE-GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQ 158 + E+N + + G G+NL G + ++ + W+ Q ER + Sbjct: 692 MVDEFNNNPDLHVFLLTTKVGGLGVNLT-GADRVIIYDPDWNPSTDVQARERAW-----R 745 Query: 159 AGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 G KR V VY L+ TI+E + R K + + +L K+ Sbjct: 746 LGQKRDVTVYRLMTAGTIEEKIYHRQIFKQFLTNKILKDPKQR 788 >gi|159470413|ref|XP_001693354.1| hypothetical protein CHLREDRAFT_117345 [Chlamydomonas reinhardtii] gi|158277612|gb|EDP03380.1| predicted protein [Chlamydomonas reinhardtii] Length = 526 Score = 101 bits (252), Expect = 5e-20, Method: Composition-based stats. Identities = 35/168 (20%), Positives = 68/168 (40%), Gaps = 22/168 (13%) Query: 45 EKHWKEVHDEKIKALEVII----EKANAAPIIVAYHFNSDLARLQK----------AFPQ 90 + H K+ LE+++ + + +++ ++ L L+ Sbjct: 305 PGSCQAYHSGKVAVLEMMLKAVRDSGSGDKVVLVSNYTEALDILEGMCRAHAWAFLRLDG 364 Query: 91 GRTLDKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMI 148 G + K + +N+ P LL + G GLN+ G N LV F W+ Q + Sbjct: 365 GCDVKKRQPLVDCFNDPAHPSFLLLLSSKAGGVGLNI-IGANRLVLFDPDWNPANDLQAM 423 Query: 149 ERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 R+ + G K+ V++Y L+ +I+E V QR K + +++ Sbjct: 424 ARVW-----RQGQKKKVWIYRLLTTGSIEEKVYQRQVAKQGLSAAIVD 466 >gi|109090020|ref|XP_001094924.1| PREDICTED: lymphoid-specific helicase isoform 6 [Macaca mulatta] Length = 821 Score = 101 bits (252), Expect = 5e-20, Method: Composition-based stats. Identities = 24/159 (15%), Positives = 61/159 (38%), Gaps = 19/159 (11%) Query: 50 EVHDEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQK----------AFPQGRTLDKD 97 + K L+ ++ + +++ S L L + + Sbjct: 578 VTNSGKFLILDRMLPELKKRGHKVLLFSQMTSMLDILMDYCHLRDFNFSRLDGSMSYSER 637 Query: 98 PCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 + +N + ++ + + G G+NL + ++ + W+ + Q +R Sbjct: 638 EKNMHSFNMDPEVFIFLVSTRAGGLGINLT-AADTVIIYDSDWNPQSDLQAQDRC----- 691 Query: 157 RQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 + G + V VY L+ NT+D+ +++R K ++ L++ Sbjct: 692 HRIGQTKPVVVYRLVTANTVDQKIVERAAAKRKLEKLII 730 >gi|311276917|ref|XP_003135410.1| PREDICTED: probable global transcription activator SNF2L1 [Sus scrofa] Length = 1073 Score = 101 bits (252), Expect = 5e-20, Method: Composition-based stats. Identities = 44/242 (18%), Positives = 90/242 (37%), Gaps = 52/242 (21%) Query: 1 MKQY---HKFQRELYCDLQGENIEAFNSASKTVK------CLQL---ANGAVYYD----- 43 +K Y K QRE Y + ++I+ NSA K K +QL N +D Sbjct: 416 IKIYLGLSKMQREWYTKILMKDIDVLNSAGKMDKMRLLNILMQLRKCCNHPYLFDGAEPG 475 Query: 44 ---EEKHWKEVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQ---------KAFP 89 + K+ L+ ++ K + +++ L L+ Sbjct: 476 PPYTTDEHIVSNSGKMVVLDKLLAKLKEQGSRVLIFSQMTRLLDILEDYCMWRGYEYCRL 535 Query: 90 QGRTLDKDPCT-------------IQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVF 134 G+T ++ I+ +N + + G G+NL ++++ Sbjct: 536 DGQTPHEEREDKFLEVELLGQREAIEAFNVPNSSRFIFMLSTRAGGLGINL-ASADVVIL 594 Query: 135 FSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 + W+ + Q ++R + G K+ V V+ LI NT++E +++R K + ++ Sbjct: 595 YDSDWNPQVDLQAMDR-----AHRIGQKKPVRVFRLITDNTVEERIVERAEIKLRLDSIV 649 Query: 195 LN 196 + Sbjct: 650 IQ 651 >gi|156369786|ref|XP_001628155.1| predicted protein [Nematostella vectensis] gi|156215124|gb|EDO36092.1| predicted protein [Nematostella vectensis] Length = 756 Score = 101 bits (252), Expect = 5e-20, Method: Composition-based stats. Identities = 36/176 (20%), Positives = 72/176 (40%), Gaps = 29/176 (16%) Query: 44 EEKHWKEVHDEKIKALEVII---EKANAAPIIVAYHFNSDLARLQKAFPQGR-------- 92 + K+ + K++ L+ I+ + + +++ ++ L +K Q R Sbjct: 491 DLKNVQPELSGKMQVLDYILAVTKATSDDKVVLVSNYTQTLDLFEKLCRQRRYQHVRLDG 550 Query: 93 --TLDKDPCTIQEWNEGK--IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMI 148 ++ K + +N+ K + + G GLNL G N LV F W+ Q + Sbjct: 551 SMSIKKRQKIVDRFNDPKGGDFIFMLSSKAGGCGLNL-IGANRLVMFDPDWNPANDDQAM 609 Query: 149 ERIGVTRQRQAGFKRA--------VFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 R+ + G K+ VF+Y L++ TI+E + QR K + +++ Sbjct: 610 ARVW-----RDGQKKKAIFDLLLQVFIYRLLSTGTIEEKIFQRQAHKKALSSCVVD 660 >gi|156095999|ref|XP_001614034.1| DNA repair protein rhp16 [Plasmodium vivax SaI-1] gi|148802908|gb|EDL44307.1| DNA repair protein rhp16, putative [Plasmodium vivax] Length = 1589 Score = 101 bits (252), Expect = 5e-20, Method: Composition-based stats. Identities = 37/169 (21%), Positives = 66/169 (39%), Gaps = 24/169 (14%) Query: 52 HDEKIKA-LEVI--IEKANAAPIIVAYHFNSDLARLQKAFPQGRTL----------DKDP 98 KI+A E I + K ++ + S L ++ + + Sbjct: 1417 TSTKIEAVFEEIQNVMKTTDDKCLIFSQYCSMLDLIEYHLKKHNIICSKLLGYMSMVSRN 1476 Query: 99 CTIQEWNEGK-IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 + +NE K + +L + G GLNLQ N + WW+ Q I+R Sbjct: 1477 NILYSFNEDKHLRVLLISLKAGGEGLNLQV-ANRIFIVDPWWNPAAELQAIQR-----AH 1530 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL----NALKKET 202 + G + V+ I +NT++E ++Q K + D + NA++K T Sbjct: 1531 RIGQTKTVYATRFIIENTVEEKIVQLQNKKQLVFDCTIGDSGNAMQKLT 1579 >gi|195117078|ref|XP_002003076.1| GI24344 [Drosophila mojavensis] gi|193913651|gb|EDW12518.1| GI24344 [Drosophila mojavensis] Length = 843 Score = 101 bits (252), Expect = 6e-20, Method: Composition-based stats. Identities = 31/163 (19%), Positives = 65/163 (39%), Gaps = 19/163 (11%) Query: 53 DEKIKALEVIIEK--ANAAPIIVAYHFNSDLA------RLQKA----FPQGRTLDKDPCT 100 K + L+ ++ K A +++ F L R++K + + Sbjct: 650 SGKFQYLDTLLPKLKAEGHRVLLFSQFTMMLDVVEQYLRIRKHGFCRLDGATAVKERQDL 709 Query: 101 IQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQA 159 I ++N + I + + G G+NL ++ + ++ +Q +R + Sbjct: 710 ITDFNVDDNIFVFLLSTKAGGVGINLTAADTCIIH-DIDFNPYNDKQAEDRC-----HRM 763 Query: 160 GFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKET 202 G R V +Y LI++NTI+E +L K ++ + + K E Sbjct: 764 GQNRPVTIYRLISENTIEEGILMAAEEKLKLEKDITSTEKGEV 806 >gi|170580649|ref|XP_001895355.1| recombination factor GdRad54 [Brugia malayi] gi|158597754|gb|EDP35808.1| recombination factor GdRad54, putative [Brugia malayi] Length = 865 Score = 101 bits (252), Expect = 6e-20, Method: Composition-based stats. Identities = 33/176 (18%), Positives = 73/176 (41%), Gaps = 23/176 (13%) Query: 45 EKHWKEVHDEKIKALEVIIEKA----NAAPIIVAYHFNSDLARL-----QKAFPQGR--- 92 K ++ K+K L+ ++ N ++V ++ + + +P R Sbjct: 588 GKKFEPAFSGKMKVLDYLLAATRATTNDKFVLV-SNYTQTIDAFVELCQLRRYPYIRLDG 646 Query: 93 --TLDKDPCTIQEWNEGK--IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMI 148 T+ + ++++N+ + + + G GLNL G N L+ F W+ Q + Sbjct: 647 TCTIKQRAKLVEKFNDPESVEYVFLLSSKAGGCGLNL-IGANRLIMFDPDWNPANDDQAM 705 Query: 149 ERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIH 204 R+ + G K+ F+Y L++ +I+E + QR K + +++ + H Sbjct: 706 ARVW-----RDGQKKNCFIYRLLSTGSIEEKMFQRQAHKKALSSCVVDEISDVARH 756 >gi|313213982|emb|CBY40778.1| unnamed protein product [Oikopleura dioica] Length = 867 Score = 101 bits (252), Expect = 6e-20, Method: Composition-based stats. Identities = 32/167 (19%), Positives = 65/167 (38%), Gaps = 20/167 (11%) Query: 44 EEKHWKEVHDEKIKALEVIIEKA---NAAPIIVAYHFNSDLARLQK----------AFPQ 90 E + K++ L +I + N ++ L L++ Sbjct: 451 PETRLIQYDCGKLQTLHDLIYQKLRPNGHRALIFTQMTKMLDVLERFLSYHALTYSRLDG 510 Query: 91 GRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIE 149 +K ++ +N + KI + S G G+NL G + ++F+ W+ Q Sbjct: 511 STAPEKRIQIMETFNRDPKIFCMILSTRSGGVGVNLT-GADTVIFYDSDWNPTIDAQA-- 567 Query: 150 RIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 R + G R V +Y IA++TI+E +L++ K + ++ + Sbjct: 568 ---QDRAHRIGQTRDVHIYRFIAKDTIEENILKKANYKRKLGNVAIE 611 >gi|312071167|ref|XP_003138483.1| hypothetical protein LOAG_02898 [Loa loa] gi|307766356|gb|EFO25590.1| hypothetical protein LOAG_02898 [Loa loa] Length = 755 Score = 101 bits (252), Expect = 6e-20, Method: Composition-based stats. Identities = 33/176 (18%), Positives = 72/176 (40%), Gaps = 23/176 (13%) Query: 45 EKHWKEVHDEKIKALEVIIEKA----NAAPIIVAYHFNSDLARL-----QKAFPQGR--- 92 + ++ K+K L+ ++ N ++V ++ + + +P R Sbjct: 478 GRKFEPAFSGKMKVLDYLLAATRTTTNDKFVLV-SNYTQTIDAFVELCQLRRYPYIRLDG 536 Query: 93 --TLDKDPCTIQEWNEGK--IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMI 148 T+ + ++++N+ K + + G GLNL G N L+ F W+ Q + Sbjct: 537 TCTIKQRAKLVEKFNDPKSVEYVFLLSSKAGGCGLNL-IGANRLIMFDPDWNPANDDQAM 595 Query: 149 ERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIH 204 R+ + G ++ F+Y L+A +I+E + QR K + +++ H Sbjct: 596 ARVW-----RDGQRKNCFIYRLLASGSIEEKMFQRQAHKKALSSCVIDEASDVARH 646 >gi|209878917|ref|XP_002140899.1| SNF2 family N-terminal domain-containing protein [Cryptosporidium muris RN66] gi|209556505|gb|EEA06550.1| SNF2 family N-terminal domain-containing protein [Cryptosporidium muris RN66] Length = 1321 Score = 101 bits (252), Expect = 6e-20, Method: Composition-based stats. Identities = 34/161 (21%), Positives = 57/161 (35%), Gaps = 21/161 (13%) Query: 52 HDEKIKALEVIIEKA----NAAPIIVAYHFNSDLARLQKAFPQGR----------TLDKD 97 KI AL I + A I+ F + L + + T+ + Sbjct: 1148 SSTKINALLDEINQMILSDPDAKGIIFSQFTNMLDLVMYKLKKSNIDCALLAGSMTMIQR 1207 Query: 98 PCTIQEWNE-GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 + +N+ + LL + G GLNLQ N + WW+ Q R Sbjct: 1208 NSILYSFNKFPDLKLLLISLKAGGEGLNLQV-ANYVFLLDPWWNPAVELQA-----FQRA 1261 Query: 157 RQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + G + V I ++TI+E ++Q K + D + A Sbjct: 1262 HRIGQTKPVTAIRFIIKDTIEERMIQLQEKKQLVFDGTVGA 1302 >gi|50549907|ref|XP_502425.1| YALI0D04961p [Yarrowia lipolytica] gi|74689630|sp|Q6CA87|SWR1_YARLI RecName: Full=Helicase SWR1 gi|49648293|emb|CAG80613.1| YALI0D04961p [Yarrowia lipolytica] Length = 1772 Score = 101 bits (252), Expect = 6e-20, Method: Composition-based stats. Identities = 28/166 (16%), Positives = 69/166 (41%), Gaps = 19/166 (11%) Query: 44 EEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQK----------AFPQG 91 +K + K++ L +++ A ++ L L++ Sbjct: 1459 PDKRLLQYDCGKLQRLATLLQDLIAGGHRALIFTQMTKVLDVLEQFLNIHGLRYMRLDGA 1518 Query: 92 RTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 +++ + +N + KIP+ S G G+NL G + ++F+ W+ +Q +R Sbjct: 1519 TKIEQRQLLTERFNTDPKIPVFILSTRSGGLGINLT-GADTVIFYDSDWNPSMDKQCQDR 1577 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + G R V +Y ++++TI+ +L++ K + ++++ Sbjct: 1578 C-----HRIGQTRDVHIYRFVSEHTIESNILKKANQKQILDNVVIQ 1618 >gi|320587640|gb|EFX00115.1| tbp associated factor [Grosmannia clavigera kw1407] Length = 1928 Score = 101 bits (252), Expect = 6e-20, Method: Composition-based stats. Identities = 39/209 (18%), Positives = 70/209 (33%), Gaps = 31/209 (14%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEV 61 + Y + QR + QG +IE N A K L E Sbjct: 1645 RMYDETQR--LLERQGSSIEDPNHAPKLTALRDLLVDCGIGVEGDGDGSDP--------- 1693 Query: 62 IIEKANAAPIIVAYHFNSDLARLQK-------------AFPQGRTLDKDPCTIQEWN-EG 107 + + ++ L +Q ++ + +N + Sbjct: 1694 LYQPIKPHRALIFCQMKEMLDMVQNTVLKSMLPSVSYLRLDGSVEANRRQDIVNRFNKDP 1753 Query: 108 KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFV 167 +L G GLNL G + ++F W+ + Q ++R + G K+ V V Sbjct: 1754 SYDVLLLTTNVGGLGLNLT-GADTVIFVEHDWNPQRDLQAMDR-----AHRIGQKKVVNV 1807 Query: 168 YYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 Y LI + T++E +L R K + ++N Sbjct: 1808 YRLITRGTLEEKILSLQRFKIDVASTVVN 1836 >gi|225562568|gb|EEH10847.1| helicase swr1 [Ajellomyces capsulatus G186AR] Length = 1674 Score = 101 bits (252), Expect = 6e-20, Method: Composition-based stats. Identities = 30/166 (18%), Positives = 68/166 (40%), Gaps = 19/166 (11%) Query: 44 EEKHWKEVHDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAF---------PQGR 92 +K + K++ L+ ++ ++ ++ L L++ G Sbjct: 1338 PDKRLLQYDCGKLQQLDKLLRKLQSGGHRALIFTQMTKMLDILEQFLNIHGHRYLRLDGA 1397 Query: 93 TLDKDPCTI--QEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 T + + + N+ +I S G G+NL G + ++F+ L W+ +Q +R Sbjct: 1398 TKVEQRQMLTERFNNDTRILAFILSSRSGGLGINLT-GADTVIFYDLDWNPAMDKQCQDR 1456 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + G R V +Y I++ TI+ +L++ K + D+++ Sbjct: 1457 C-----HRIGQTRDVHIYRFISEYTIESNILRKANQKRMLDDVIIQ 1497 >gi|167521471|ref|XP_001745074.1| hypothetical protein [Monosiga brevicollis MX1] gi|163776688|gb|EDQ90307.1| predicted protein [Monosiga brevicollis MX1] Length = 827 Score = 101 bits (252), Expect = 6e-20, Method: Composition-based stats. Identities = 39/162 (24%), Positives = 63/162 (38%), Gaps = 23/162 (14%) Query: 42 YDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTI 101 DE + L+++ E A P + RLQ + P + L + Sbjct: 569 TDERALLVSNSTRCLDILQLLCE-AEGWPFL----------RLQGSTPTHQRL----EMV 613 Query: 102 QEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQA 159 +N + + G GLN+ G + LV F W+ Q + RI + Sbjct: 614 NRFNARHHDDFVFLMSSKAGGVGLNI-VGASRLVLFDTDWNPSHDLQAMARIW-----RE 667 Query: 160 GFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 G R VF+Y L+A TI+E + QR KS + ++ + E Sbjct: 668 GQTRPVFIYRLVATGTIEEKIYQRQIVKSALGTTVMEDKETE 709 >gi|115390074|ref|XP_001212542.1| conserved hypothetical protein [Aspergillus terreus NIH2624] gi|114194938|gb|EAU36638.1| conserved hypothetical protein [Aspergillus terreus NIH2624] Length = 1205 Score = 101 bits (252), Expect = 6e-20, Method: Composition-based stats. Identities = 36/204 (17%), Positives = 79/204 (38%), Gaps = 34/204 (16%) Query: 8 QRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEK-- 65 +++ +L+ E + N SK +L EK W V KI+ I++ Sbjct: 997 KKKTLAELKKEA--SKNIKSKRKYLRRL---------EKTW--VTSAKIEKTLEILDGIR 1043 Query: 66 --ANAAPIIVAYHFNSDLARLQ----------KAFPQG-RTLDKDPCTIQEWNEGKIPLL 112 I+ F S L L+ + + + D++ + ++ ++ Sbjct: 1044 QGEGNEKTIIFSQFTSLLDLLEVPISRRGWNYRRYDGSMKPQDRNASVLDFTDDPDCRIM 1103 Query: 113 FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIA 172 + GLNL + ++ F +W+ +Q I+R + G R V ++ ++ Sbjct: 1104 LVSLKAGNSGLNL-VAASQVIIFDPFWNPYIEEQAIDR-----AHRIGQMREVQIHRILV 1157 Query: 173 QNTIDELVLQRLRTKSTIQDLLLN 196 NT+++ +L+ K + + L+ Sbjct: 1158 PNTVEDRILELQDKKRELIEGALD 1181 >gi|71020091|ref|XP_760276.1| hypothetical protein UM04129.1 [Ustilago maydis 521] gi|46099924|gb|EAK85157.1| hypothetical protein UM04129.1 [Ustilago maydis 521] Length = 983 Score = 101 bits (252), Expect = 6e-20, Method: Composition-based stats. Identities = 30/165 (18%), Positives = 70/165 (42%), Gaps = 23/165 (13%) Query: 52 HDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQ---KAFPQGRT--------LDKDP 98 K+ L ++++ +++ F + L ++ F + RT D+ Sbjct: 711 ASGKMLMLNRLLDELFHRGHKVLIFSQFTTMLDIIEDWANEFKRLRTCRIDGTTPQDERR 770 Query: 99 CTIQEWNEGK----IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 ++ +NE K L + G G+NL + ++F+ W+ + Q +R+ Sbjct: 771 AQMKSFNEDKGRDACNLFLLSTRAGGLGINL-VAADTVIFYDSDWNPQMDLQAQDRV--- 826 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 + G R ++ L++ +T++E +L+R K ++ L++ K Sbjct: 827 --HRIGQTRPCLIFRLVSASTVEERILRRAGNKRKLEALVIQQGK 869 >gi|325092504|gb|EGC45814.1| helicase swr1 [Ajellomyces capsulatus H88] Length = 1674 Score = 101 bits (252), Expect = 6e-20, Method: Composition-based stats. Identities = 30/166 (18%), Positives = 68/166 (40%), Gaps = 19/166 (11%) Query: 44 EEKHWKEVHDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAF---------PQGR 92 +K + K++ L+ ++ ++ ++ L L++ G Sbjct: 1338 PDKRLLQYDCGKLQQLDKLLRKLQSGGHRALIFTQMTKMLDILEQFLNIHGHRYLRLDGA 1397 Query: 93 TLDKDPCTI--QEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 T + + + N+ +I S G G+NL G + ++F+ L W+ +Q +R Sbjct: 1398 TKVEQRQMLTERFNNDTRILAFILSSRSGGLGINLT-GADTVIFYDLDWNPAMDKQCQDR 1456 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + G R V +Y I++ TI+ +L++ K + D+++ Sbjct: 1457 C-----HRIGQTRDVHIYRFISEYTIESNILRKANQKRMLDDVIIQ 1497 >gi|300933599|ref|ZP_07148855.1| putative DNA/RNA helicase [Corynebacterium resistens DSM 45100] Length = 1052 Score = 101 bits (252), Expect = 6e-20, Method: Composition-based stats. Identities = 38/209 (18%), Positives = 76/209 (36%), Gaps = 27/209 (12%) Query: 3 QYHKFQRELYCDLQG-ENIEAFNSASKTVKCLQLANGAVYYDEEKHWK----EVHDEKIK 57 Y + ++ L+ N V+ Q+ N ++ + E K+K Sbjct: 793 LYKAYIDDIEQRLRDRSQDRRGNILGALVRIKQICNHPAHFAGDGSALLKEGEHRSGKVK 852 Query: 58 ALEVIIEKA--NAAPIIVAYHF-------NSDLARLQK----AFPQGRTLDKDPCTIQEW 104 I+E+A ++ F +L R+ G K ++++ Sbjct: 853 RAFEILEQAQREGRKALIFTQFPTFGTMLLPELERIFGQPIPMLHGGVPRKKRADMVRQF 912 Query: 105 N-EGKI--PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGF 161 G+ P + + G G+ L +++V WW+ Q +R + G Sbjct: 913 QLPGEQGPPAMVLSVRAGGTGITLTE-ASVVVHIDRWWNPAVEDQATDR-----AYRIGQ 966 Query: 162 KRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 R V VY L+A+ T+DE + +++K + Sbjct: 967 NRDVTVYKLVAEGTLDERINDIIQSKREL 995 >gi|289619716|emb|CBI53999.1| unnamed protein product [Sordaria macrospora] Length = 861 Score = 101 bits (252), Expect = 6e-20, Method: Composition-based stats. Identities = 26/140 (18%), Positives = 55/140 (39%), Gaps = 18/140 (12%) Query: 68 AAPIIVAYHFNSDLARLQK-----------AFPQGRTLDKDPCTIQEWN-EGKIPLLFAH 115 +++ F + L L+ G D I+++N + + + Sbjct: 635 GHKVLIFSQFKTQLDILEDYCRELRSWDICRIDGGVAQDDRRAQIEQFNTDPAVKIFLLS 694 Query: 116 PASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNT 175 + G G+NL + ++ F W+ ++ Q +R + G R V VY L + T Sbjct: 695 TRAGGQGINL-ASADTVILFDSDWNPQQDLQAQDRC-----HRIGQTRPVVVYRLATKGT 748 Query: 176 IDELVLQRLRTKSTIQDLLL 195 ++E +L K ++ L++ Sbjct: 749 VEEELLMSADAKRRLEKLVI 768 >gi|270009357|gb|EFA05805.1| hypothetical protein TcasGA2_TC030720 [Tribolium castaneum] Length = 729 Score = 101 bits (252), Expect = 6e-20, Method: Composition-based stats. Identities = 29/158 (18%), Positives = 61/158 (38%), Gaps = 19/158 (12%) Query: 59 LEVIIEKANAAPIIVAYHFNSDLARLQK----------AFPQGRTLDKDPCTIQEWNEGK 108 L + N ++V ++ L +K ++ K + +N+ + Sbjct: 468 LANLKNNYNDKVVLV-SNYTQTLDLFEKLCRKRGYRYVRLDGTMSIKKRAKVVANFNDPE 526 Query: 109 --IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVF 166 + + G GLNL G N L+ F W+ Q + R+ + G ++ + Sbjct: 527 SGEFIFMLSSKAGGCGLNL-IGANRLIMFDPDWNPANDDQAMARVW-----RDGQQKPCY 580 Query: 167 VYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIH 204 +Y +A TI+E + QR K + +++ ++ H Sbjct: 581 IYRFLAAGTIEEKIFQRQAHKKALSSTVVDNNEETARH 618 >gi|189238349|ref|XP_967988.2| PREDICTED: similar to steroid receptor-interacting snf2 domain protein [Tribolium castaneum] Length = 713 Score = 101 bits (252), Expect = 6e-20, Method: Composition-based stats. Identities = 29/158 (18%), Positives = 61/158 (38%), Gaps = 19/158 (12%) Query: 59 LEVIIEKANAAPIIVAYHFNSDLARLQK----------AFPQGRTLDKDPCTIQEWNEGK 108 L + N ++V ++ L +K ++ K + +N+ + Sbjct: 452 LANLKNNYNDKVVLV-SNYTQTLDLFEKLCRKRGYRYVRLDGTMSIKKRAKVVANFNDPE 510 Query: 109 --IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVF 166 + + G GLNL G N L+ F W+ Q + R+ + G ++ + Sbjct: 511 SGEFIFMLSSKAGGCGLNL-IGANRLIMFDPDWNPANDDQAMARVW-----RDGQQKPCY 564 Query: 167 VYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIH 204 +Y +A TI+E + QR K + +++ ++ H Sbjct: 565 IYRFLAAGTIEEKIFQRQAHKKALSSTVVDNNEETARH 602 >gi|240281002|gb|EER44505.1| helicase swr1 [Ajellomyces capsulatus H143] Length = 1674 Score = 101 bits (252), Expect = 6e-20, Method: Composition-based stats. Identities = 30/166 (18%), Positives = 68/166 (40%), Gaps = 19/166 (11%) Query: 44 EEKHWKEVHDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAF---------PQGR 92 +K + K++ L+ ++ ++ ++ L L++ G Sbjct: 1338 PDKRLLQYDCGKLQQLDKLLRKLQSGGHRALIFTQMTKMLDILEQFLNIHGHRYLRLDGA 1397 Query: 93 TLDKDPCTI--QEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 T + + + N+ +I S G G+NL G + ++F+ L W+ +Q +R Sbjct: 1398 TKVEQRQMLTERFNNDTRILAFILSSRSGGLGINLT-GADTVIFYDLDWNPAMDKQCQDR 1456 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + G R V +Y I++ TI+ +L++ K + D+++ Sbjct: 1457 C-----HRIGQTRDVHIYRFISEYTIESNILRKANQKRMLDDVIIQ 1497 >gi|328872835|gb|EGG21202.1| SNF2-related domain-containing protein [Dictyostelium fasciculatum] Length = 1993 Score = 101 bits (252), Expect = 6e-20, Method: Composition-based stats. Identities = 42/217 (19%), Positives = 79/217 (36%), Gaps = 27/217 (12%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQL---ANGA-VYYDEE---KHWKEVHDE 54 K Y + + L E + +QL N ++YDEE + Sbjct: 1245 KMYQLIRSKSVNKLNQEEGAPRLARGLKNTLVQLRKVCNHPYLFYDEEYAIDEYMIRSAG 1304 Query: 55 KIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAF---------PQGRTLDKDPC-TIQ 102 K L+ I+ K A+ +++ + L+ F G T ++ + Sbjct: 1305 KFDLLDKILPKLKASGHRVLIFSQMTHLIDILEHYFTYKGYKYLRLDGSTKSEERGPMLN 1364 Query: 103 EWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 +N + + + G GLNLQ + ++ F W+ + Q R + G Sbjct: 1365 LFNAPGSDLFIFVLSTRAGGLGLNLQT-ADTVIIFDSDWNPQMDLQA-----QDRAHRIG 1418 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 K+ V V L+ N+++E +L R K + ++ A Sbjct: 1419 QKQTVKVLRLVTVNSVEEKILARAIFKKELDKKIIQA 1455 >gi|303277253|ref|XP_003057920.1| SNF2 super family [Micromonas pusilla CCMP1545] gi|226460577|gb|EEH57871.1| SNF2 super family [Micromonas pusilla CCMP1545] Length = 945 Score = 101 bits (252), Expect = 6e-20, Method: Composition-based stats. Identities = 38/167 (22%), Positives = 63/167 (37%), Gaps = 23/167 (13%) Query: 52 HDEKIKALEVIIEKANAA--PIIVAYHFNSDLARLQKAFPQGRTLDK------------- 96 K+ L ++ +V F S L + A K Sbjct: 643 FSGKLAVLLTMLRATTPGVDKTVVVSGFTSTLDLIAAALSAAGVGGKVSSRLDGSVAPNL 702 Query: 97 DPCTIQEWNEGKI-PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTR 155 + ++N+GK + + G GLNL G N LV F W+ Q + R+ Sbjct: 703 RGAIVNKFNDGKGGDVFLLSCKAGGVGLNL-VGANRLVLFDSDWNPANDLQALARVW--- 758 Query: 156 QRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL-LNALKKE 201 + G KR V +Y L++ T++E V QR K + D + + ++ K Sbjct: 759 --REGQKRPVTIYRLVSTGTVEERVFQRQILKGDVADAMGMASVNKR 803 >gi|165971312|gb|AAI58841.1| Rad54l protein [Rattus norvegicus] Length = 470 Score = 101 bits (252), Expect = 6e-20, Method: Composition-based stats. Identities = 33/168 (19%), Positives = 68/168 (40%), Gaps = 23/168 (13%) Query: 45 EKHWKEVHDEKIKALEVII----EKANAAPIIVAYHFNSDLARLQK----------AFPQ 90 K + K+ L+ I+ +++ ++V ++ L +K Sbjct: 209 SKAVEPQLSGKMLVLDYILAMTRSRSSDKVVLV-SNYTQTLDLFEKLCRARRYLYVRLDG 267 Query: 91 GRTLDKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMI 148 ++ K ++ +N P + + G GLNL G N LV F W+ +Q + Sbjct: 268 TMSIKKRAKVVERFNSPSSPDFVFMLSSKAGGCGLNL-IGANRLVMFDPDWNPANDEQAM 326 Query: 149 ERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 R+ + G K+ ++Y L++ TI+E + QR K + +++ Sbjct: 327 ARVW-----RDGQKKICYIYRLLSAGTIEEKIFQRQSHKKALSSCVVD 369 >gi|268531852|ref|XP_002631054.1| C. briggsae CBR-BTF-1 protein [Caenorhabditis briggsae] Length = 1510 Score = 101 bits (252), Expect = 6e-20, Method: Composition-based stats. Identities = 39/191 (20%), Positives = 68/191 (35%), Gaps = 26/191 (13%) Query: 23 FNSASKTVKCLQLANGA-VYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDL 81 + + K QL + + ++ DE L + E ++ + + Sbjct: 1254 TSKSGKMEALKQLLIECEICKNPDEEVAAEADE----LGGLNEVGQGHRALIFCQWKTSA 1309 Query: 82 ARLQKAFPQGR--------------TLDKDPCTIQEWNEGK-IPLLFAHPASCGHGLNLQ 126 + +A G + + +NE K I +L G GLNL Sbjct: 1310 QLVSEALRSGEFGSVVSHLVLDGNVPVGDRMKMVNRFNEDKTIEVLILTTHVGGVGLNLT 1369 Query: 127 YGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRT 186 G + ++F W+ + Q I+R + G R V VY LI Q T++E V+ + Sbjct: 1370 -GADTVIFMDHDWNPMKDLQAIDR-----AHRLGQTRNVNVYRLITQGTVEEKVMSLAKF 1423 Query: 187 KSTIQDLLLNA 197 K L+ A Sbjct: 1424 KLNTAQALIGA 1434 >gi|146419519|ref|XP_001485721.1| hypothetical protein PGUG_01392 [Meyerozyma guilliermondii ATCC 6260] Length = 888 Score = 101 bits (252), Expect = 6e-20, Method: Composition-based stats. Identities = 33/142 (23%), Positives = 60/142 (42%), Gaps = 19/142 (13%) Query: 68 AAPIIVAYHFNSDLARLQKAFPQ---------GRTLDKDP-CTIQEWN---EGKIPLLFA 114 +++ ++ L L+++ + G T +K+ + ++N + Sbjct: 614 GEKVVLVSNYTQTLKLLEQSVNKLNMKSLRLDGTTANKERDKLVNQFNKLSAESTMIFLL 673 Query: 115 HPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQN 174 + G GLNL G + L+ F W+ Q + RI + G KR VF+Y L+ Sbjct: 674 SAKAGGVGLNL-VGASRLILFDNDWNPSVDLQAMARI-----HRDGQKRPVFIYRLLTTG 727 Query: 175 TIDELVLQRLRTKSTIQDLLLN 196 IDE + QR K+ + D L+ Sbjct: 728 CIDEKIFQRQLMKNNLSDKFLD 749 >gi|168061453|ref|XP_001782703.1| SNF2 family DNA-dependent ATPase [Physcomitrella patens subsp. patens] gi|162665796|gb|EDQ52468.1| SNF2 family DNA-dependent ATPase [Physcomitrella patens subsp. patens] Length = 2113 Score = 101 bits (252), Expect = 6e-20, Method: Composition-based stats. Identities = 34/226 (15%), Positives = 78/226 (34%), Gaps = 38/226 (16%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVH--------- 52 K Y + R G S + + L++ Y K + Sbjct: 1141 KNYKQLNR-------GNTTGKKRSLNFILMDLKMVCNHPYLFPGKEPEHGDADELFRLLI 1193 Query: 53 --DEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQK----------AFPQGRTLDKDP 98 K++ L ++ + +++ S L L+ Sbjct: 1194 TASGKLQVLAKLLPRLKEGGHRVLLFSQMKSMLDILEDFLSHLDYKFCRIDGSTPASGRQ 1253 Query: 99 CTIQEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 I ++N + + + G G+NL + ++ + ++ Q R Sbjct: 1254 KQIADFNSANSDVFIFLISTRAGGLGINL-PSADTVIIYDPDFNPFVDLQAQAR-----A 1307 Query: 157 RQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKET 202 + G + V VY LI + +++E + +R R K +++L++++ +K+T Sbjct: 1308 HRIGQRNVVLVYQLITKCSVEEKITERSRQKLAMENLVMSSSEKDT 1353 >gi|194041750|ref|XP_001929005.1| PREDICTED: lymphoid-specific helicase [Sus scrofa] Length = 837 Score = 101 bits (252), Expect = 6e-20, Method: Composition-based stats. Identities = 24/159 (15%), Positives = 59/159 (37%), Gaps = 19/159 (11%) Query: 50 EVHDEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQK----------AFPQGRTLDKD 97 + K L+ ++ + +++ L L + + Sbjct: 594 VTNSGKFLILDRMLPELKIRGHKVLLFSQMTRMLDILMDYCHFRNFNFSRLDGSMSYTER 653 Query: 98 PCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 + +N + + + + G G+NL + ++ + W+ + Q +R Sbjct: 654 EKNMHSFNTDPDVFIFLVSTRAGGLGINLT-AADTVIIYDSDWNPQSDLQAQDRC----- 707 Query: 157 RQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 + G + V VY L+ NTID+ +++R K ++ L++ Sbjct: 708 HRIGQTKPVVVYRLVTANTIDQKIVERAAAKRKLEKLII 746 >gi|294659015|ref|XP_002770883.1| DEHA2F23188p [Debaryomyces hansenii CBS767] gi|218511864|sp|Q6BKC2|SWR1_DEBHA RecName: Full=Helicase SWR1 gi|202953552|emb|CAR66400.1| DEHA2F23188p [Debaryomyces hansenii] Length = 1616 Score = 101 bits (252), Expect = 6e-20, Method: Composition-based stats. Identities = 32/166 (19%), Positives = 71/166 (42%), Gaps = 19/166 (11%) Query: 44 EEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAF---------PQGR 92 +K + K++ L +++ AN ++ L L++ G Sbjct: 1322 PDKSLLQFDCGKLQKLATLLQDLTANGHRALIFTQMTKVLDILEQFLNIHGYRYMRLDGA 1381 Query: 93 TLDKDPCTI-QEWNEG-KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 T +D + +++N KIP+ S G G+NL G + ++F+ W+ +Q +R Sbjct: 1382 TKIEDRQLLTEKFNRDSKIPVFILSTRSGGLGINLT-GADTVIFYDSDWNPAMDKQCQDR 1440 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + G R V +Y +++ TI+ +L++ K + ++++ Sbjct: 1441 C-----HRIGQSRDVHIYRFVSEYTIESNILRKANQKRQLDNVVIQ 1481 >gi|321476094|gb|EFX87055.1| RAD54B meiotic recombination protein [Daphnia pulex] Length = 1001 Score = 101 bits (252), Expect = 6e-20, Method: Composition-based stats. Identities = 32/150 (21%), Positives = 61/150 (40%), Gaps = 17/150 (11%) Query: 59 LEVIIEKANAAPIIVAYH------FNSDLARLQKAF---PQGRTLDKDPCTIQEWNE--G 107 L+ +++ I+V+Y F + +F + + +N+ G Sbjct: 773 LDSLMKNTKEKIILVSYSTKMLDLFGESCTERKYSFVRLDGSTPTNTRMGIVDRFNDPQG 832 Query: 108 KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFV 167 + + G GLNL G + L+ + + W+ Q + RI + G KR V + Sbjct: 833 ADRVFLLSSKAGGVGLNL-IGASRLILYDIDWNPANDMQAMARIW-----REGQKRTVQI 886 Query: 168 YYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 Y L+ TI+E + QR K + +++A Sbjct: 887 YRLLTTGTIEEKIFQRQILKQGLSGAIVDA 916 >gi|296809533|ref|XP_002845105.1| helicase [Arthroderma otae CBS 113480] gi|238844588|gb|EEQ34250.1| helicase [Arthroderma otae CBS 113480] Length = 869 Score = 101 bits (252), Expect = 6e-20, Method: Composition-based stats. Identities = 25/146 (17%), Positives = 54/146 (36%), Gaps = 18/146 (12%) Query: 66 ANAAPIIVAYHFNSDLARLQKAFPQGR------------TLDKDPCTIQEWNEGKIPLLF 113 + +++ F L L+ Q R D+ + + Sbjct: 639 SKGHKVLIFSQFKGQLDILEDWATQLRSWNCCRIDGAIAQADRQEQINAFNQDPDYRIFL 698 Query: 114 AHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQ 173 + G G+NL + ++ F W+ ++ Q R + G + V VY L + Sbjct: 699 LSTRAGGQGINLT-AADTVILFDSDWNPQQDLQA-----QDRAHRIGQTKPVIVYRLATR 752 Query: 174 NTIDELVLQRLRTKSTIQDLLLNALK 199 T+++ +L+R +K ++ L++ K Sbjct: 753 GTVEQTLLERAGSKRRLEKLVIQKGK 778 >gi|237836947|ref|XP_002367771.1| DNA repair protein RAD54, putative [Toxoplasma gondii ME49] gi|211965435|gb|EEB00631.1| DNA repair protein RAD54, putative [Toxoplasma gondii ME49] gi|221482002|gb|EEE20368.1| DNA repair and recombination protein RAD54, putative [Toxoplasma gondii GT1] gi|221505079|gb|EEE30733.1| DNA repair and recombination protein RAD54, putative [Toxoplasma gondii VEG] Length = 693 Score = 101 bits (252), Expect = 6e-20, Method: Composition-based stats. Identities = 41/166 (24%), Positives = 70/166 (42%), Gaps = 20/166 (12%) Query: 54 EKIKALEVI---IEKANAAPIIVAYHFNSDLARLQKAF---------PQGRTLDKDPC-T 100 K++ LE + I ++ I++ +F S L ++ G T KD Sbjct: 521 TKLQFLENLLLSIRSSSNDKIVIVSNFTSTLDNIEIFMQAKGYSFLRLDGSTAVKDRTGL 580 Query: 101 IQEWNEGK-IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQA 159 ++ +NE K + G GLNL G N LV W+ QQ + R+ + Sbjct: 581 VKTFNESKECFAFLLSSKAGGVGLNL-IGANRLVLLDPDWNPANDQQALARVW-----RP 634 Query: 160 GFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIHV 205 G V++Y L+ TI+E +LQR K+T+ + + + H+ Sbjct: 635 GQINPVYIYRLVGARTIEEKILQRQAYKATLAQVGVVGSDFQMAHI 680 >gi|55771379|dbj|BAD72546.1| chromatin-remodeling factor CHD3 [Oryza sativa Japonica Group] gi|55773904|dbj|BAD72509.1| chromatin-remodeling factor CHD3 [Oryza sativa Japonica Group] Length = 1354 Score = 101 bits (252), Expect = 6e-20, Method: Composition-based stats. Identities = 38/224 (16%), Positives = 77/224 (34%), Gaps = 37/224 (16%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE- 60 K Y R G ++ N ++ +L A DE + + + LE Sbjct: 549 KNYEVLTRR-----SGGHVSLINV---VMELRKLCCHAFMTDEPEEPANSEEALRRLLES 600 Query: 61 ----VIIEKA------NAAPIIVAYHFNSDLARLQKAF---------PQGRTLDKDPCT- 100 +++K +++ F L L+ G+ + Sbjct: 601 SGKMELLDKMMVKLKEQGHRVLIYSQFQHMLDLLEDYLSYRKWSYERIDGKIGGAERQIR 660 Query: 101 IQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQ 158 I +N + G G+NL + ++ + W+ Q + R + Sbjct: 661 IDRFNAKNSTRFCFLLSTRAGGLGINL-ATADTVIIYDSDWNPHADLQAMAR-----AHR 714 Query: 159 AGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKET 202 G V +Y L+++ TI+E ++Q + K ++ L++ L K T Sbjct: 715 LGQTSKVMIYRLVSRGTIEERMMQLTKKKMVLEHLVVGRLTKGT 758 >gi|326381489|ref|ZP_08203183.1| SNF2-like protein [Gordonia neofelifaecis NRRL B-59395] gi|326199736|gb|EGD56916.1| SNF2-like protein [Gordonia neofelifaecis NRRL B-59395] Length = 965 Score = 101 bits (252), Expect = 6e-20, Method: Composition-based stats. Identities = 35/193 (18%), Positives = 68/193 (35%), Gaps = 28/193 (14%) Query: 24 NSASKTVKCLQLANG-AVYYDEE-------KHWKEVHDEKIKALEVIIEKANAAPIIVAY 75 + + Q+ N A Y+D+ +H + + L +I A +V Sbjct: 754 TVLAALTRLKQICNHPAHYFDDGSGMLRRGRHRSGKVELLVDVLTTLI--AEGDRALVFT 811 Query: 76 HFNSDLARLQKAFP-----------QGRTLDKDPCTIQEWNEGK-IPLLFAHPASCGHGL 123 F + L G + D+ + ++ P+L A + G GL Sbjct: 812 QFAAFAELLSGWLEPVLGTAVPVLHGGSSRDQRDAMVARFSSPDGPPVLIATLKAGGTGL 871 Query: 124 NLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQR 183 N+ N ++ WW+ Q +R + G R V V + T++E + + Sbjct: 872 NM-VAANHVIHADRWWNPAVEDQATDR-----AYRIGQTRNVQVRKFVCVGTLEERIDEM 925 Query: 184 LRTKSTIQDLLLN 196 + +K + L L+ Sbjct: 926 VASKRELSRLTLS 938 >gi|254570913|ref|XP_002492566.1| DNA helicase [Pichia pastoris GS115] gi|238032364|emb|CAY70387.1| DNA helicase [Pichia pastoris GS115] Length = 1103 Score = 101 bits (252), Expect = 6e-20, Method: Composition-based stats. Identities = 40/202 (19%), Positives = 71/202 (35%), Gaps = 29/202 (14%) Query: 16 QGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVH-----DEKIKALEVIIEKANAAP 70 Q + N SK K V E + + KI AL ++ + Sbjct: 886 QENEVLCPNCRSKISKLRLFKTHLVEDSERGYSVTLFHPYGSSSKINALLRHLKTIHETK 945 Query: 71 --IIVAYHFNSDLARLQKAFPQGRT------------LDKDPCTIQEWN----EGKIPLL 112 ++V F+S L +Q + + L + ++E+N G I +L Sbjct: 946 EHVVVISQFSSFLDLIQAELSKYKKEFKVMKFDGQLSLSERQVVLKEFNDNPENGGINVL 1005 Query: 113 FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIA 172 + G GLNL + WW Q I+R+ + G + V V I Sbjct: 1006 LLSLKAGGVGLNLTN-ASRAFMMDPWWSPSVEAQAIDRL-----HRIGQSKNVNVVRFIM 1059 Query: 173 QNTIDELVLQRLRTKSTIQDLL 194 + +I+E +L+ K + + + Sbjct: 1060 EGSIEEKMLKVQERKKQLGEAV 1081 >gi|219123447|ref|XP_002182036.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1] gi|217406637|gb|EEC46576.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1] Length = 545 Score = 101 bits (252), Expect = 6e-20, Method: Composition-based stats. Identities = 34/149 (22%), Positives = 60/149 (40%), Gaps = 19/149 (12%) Query: 59 LEVIIEKANAA-PIIVAYHFNSDLARLQK----------AFPQGRTLDKDPCTIQEWNEG 107 ++ + + N I++ ++ L + + T+ K E+N+ Sbjct: 366 MKEMRKPGNGNDKIVIVSNYTQTLDLIGRMCRENSWGFCRLDGSITMKKRQKMCDEFNDP 425 Query: 108 KIPL--LFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 PL + G GLNL GGN LV F W+ +Q R + G K+ Sbjct: 426 NSPLVAFLLSSKAGGCGLNL-IGGNRLVLFDPDWNPAVDKQAAARCW-----RDGQKKRC 479 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 F Y +A T++E + QR +K +Q ++ Sbjct: 480 FTYRFLATGTVEEKIFQRQLSKEGLQSVV 508 >gi|119570419|gb|EAW50034.1| helicase, lymphoid-specific, isoform CRA_i [Homo sapiens] Length = 839 Score = 101 bits (252), Expect = 6e-20, Method: Composition-based stats. Identities = 24/149 (16%), Positives = 59/149 (39%), Gaps = 18/149 (12%) Query: 58 ALEVIIEKANAAPIIVAYHFNSDLARLQK----------AFPQGRTLDKDPCTIQEWN-E 106 L + ++ + +++ S L L + + + +N + Sbjct: 607 MLPELKKRGHKV-VLLFSQMTSMLDILMDYCHLRDFNFSRLDGSMSYSEREKNMHSFNTD 665 Query: 107 GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVF 166 ++ + + G G+NL + ++ + W+ + Q +R + G + V Sbjct: 666 PEVFIFLVSTRAGGLGINLT-AADTVIIYDSDWNPQSDLQAQDRC-----HRIGQTKPVV 719 Query: 167 VYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 VY L+ NTID+ +++R K ++ L++ Sbjct: 720 VYRLVTANTIDQKIVERAAAKRKLEKLII 748 >gi|297806511|ref|XP_002871139.1| SNF2 domain-containing protein [Arabidopsis lyrata subsp. lyrata] gi|297316976|gb|EFH47398.1| SNF2 domain-containing protein [Arabidopsis lyrata subsp. lyrata] Length = 861 Score = 101 bits (252), Expect = 6e-20, Method: Composition-based stats. Identities = 37/177 (20%), Positives = 70/177 (39%), Gaps = 26/177 (14%) Query: 42 YDEEKHWKEVHDEKIKALEVII----EKANAAPIIVAYHFNSDLARLQK----------A 87 D E K+ AL ++ +++ +V F L L+ Sbjct: 675 TDGEDTKSSTKSSKVSALLSLLIASRQESPNTKSVVFSQFRKMLLLLETPLKAAGFTILR 734 Query: 88 FPQGRTLDKDPCTIQEWNEGKIP---LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEH 144 TL K I E+ ++ +L A + G G+NL + + WW+ Sbjct: 735 LDGAMTLKKRTQVIGEFGNPELTGPVVLLASLKASGAGINLT-AASRVYLLDPWWNPAVE 793 Query: 145 QQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 +Q ++RI + G K+ V + +IA+++I+E VL+ + K + + A K+ Sbjct: 794 EQAMDRI-----HRIGQKQEVKMIRMIARDSIEERVLELQQKKKNLAN---EAFKRR 842 >gi|198434196|ref|XP_002124510.1| PREDICTED: similar to helicase, lymphoid-specific [Ciona intestinalis] Length = 1444 Score = 101 bits (252), Expect = 6e-20, Method: Composition-based stats. Identities = 28/139 (20%), Positives = 57/139 (41%), Gaps = 17/139 (12%) Query: 68 AAPIIVAYHFNSDLARLQK----------AFPQGRTLDKDPCTIQEWNE-GKIPLLFAHP 116 +++ S L LQ F + I+E+N + L Sbjct: 1220 KHKVLLFSQMTSMLDVLQDYCVMRKFSFVRFDGSTKCEDRFAYIEEFNNDPNVFLFLLST 1279 Query: 117 ASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTI 176 + G G+NL G + ++ + W+ + Q +R + G +R V VY ++ TI Sbjct: 1280 RAGGLGINLT-GADTVIIYDSDWNPQNDSQAQDRC-----HRIGQERPVMVYRMVTMATI 1333 Query: 177 DELVLQRLRTKSTIQDLLL 195 D+ +++R K T++ +++ Sbjct: 1334 DQQIMERAARKRTMEKMIM 1352 >gi|7508346|pir||T28968 hypothetical protein T23H2.3 - Caenorhabditis elegans Length = 1026 Score = 101 bits (252), Expect = 6e-20, Method: Composition-based stats. Identities = 38/168 (22%), Positives = 69/168 (41%), Gaps = 28/168 (16%) Query: 56 IKALEVIIEKANAAPIIVAYHFNSDLARLQKAF---------PQGRTLDKDPCT-IQEWN 105 ++ + I+EK +++ + S L ++K G+ L KD + +N Sbjct: 846 LEVVREILEK--KEKVVIVSQWTSVLNLVEKHIQAGGHNYTSITGQVLVKDRQERVDSFN 903 Query: 106 --EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKR 163 +G ++ + G GLNL GGN L+ L W+ QQ +RI + G K+ Sbjct: 904 QEKGGAQVMLLSLTAGGVGLNL-IGGNHLIMVDLHWNPALEQQACDRI-----YRMGQKK 957 Query: 164 AVFVY--------YLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETI 203 VF++ LI + TI++ V+ K + +L + Sbjct: 958 EVFIHRLNISKFCRLIVKGTIEQRVMDLQEKKLALAASVLEGTATRKL 1005 >gi|294949971|ref|XP_002786396.1| DNA repair protein Rad54, putative [Perkinsus marinus ATCC 50983] gi|239900688|gb|EER18192.1| DNA repair protein Rad54, putative [Perkinsus marinus ATCC 50983] Length = 756 Score = 101 bits (252), Expect = 7e-20, Method: Composition-based stats. Identities = 32/138 (23%), Positives = 62/138 (44%), Gaps = 18/138 (13%) Query: 71 IIVAYHFNSDLARLQKA-----FPQGRT-----LDKDPCTIQEWNEGKIP--LLFAHPAS 118 +++ ++ + LQ+ +P R + K + +N+ K + + Sbjct: 522 VVIISNYTQTIDLLQRMCQEQQWPVIRLDGSIGVKKRHSLVSTFNDPKADAFVFLLSSKA 581 Query: 119 CGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDE 178 G GLNL GGN LV F W+ +Q + RI + G + ++Y L++ TI+E Sbjct: 582 GGCGLNL-IGGNRLVMFDPDWNPANDRQAMARIW-----RDGQTKVCWIYRLLSTGTIEE 635 Query: 179 LVLQRLRTKSTIQDLLLN 196 + QR K ++ +L++ Sbjct: 636 KIYQRQMKKDSLSELVVQ 653 >gi|328353422|emb|CCA39820.1| DNA helicase [Pichia pastoris CBS 7435] Length = 1103 Score = 101 bits (252), Expect = 7e-20, Method: Composition-based stats. Identities = 40/202 (19%), Positives = 71/202 (35%), Gaps = 29/202 (14%) Query: 16 QGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVH-----DEKIKALEVIIEKANAAP 70 Q + N SK K V E + + KI AL ++ + Sbjct: 886 QENEVLCPNCRSKISKLRLFKTHLVEDSERGYSVTLFHPYGSSSKINALLRHLKTIHETK 945 Query: 71 --IIVAYHFNSDLARLQKAFPQGRT------------LDKDPCTIQEWN----EGKIPLL 112 ++V F+S L +Q + + L + ++E+N G I +L Sbjct: 946 EHVVVISQFSSFLDLIQAELSKYKKEFKVMKFDGQLSLSERQVVLKEFNDNPENGGINVL 1005 Query: 113 FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIA 172 + G GLNL + WW Q I+R+ + G + V V I Sbjct: 1006 LLSLKAGGVGLNLTN-ASRAFMMDPWWSPSVEAQAIDRL-----HRIGQSKNVNVVRFIM 1059 Query: 173 QNTIDELVLQRLRTKSTIQDLL 194 + +I+E +L+ K + + + Sbjct: 1060 EGSIEEKMLKVQERKKQLGEAV 1081 >gi|317143698|ref|XP_001819632.2| SWI/SNF family DNA-dependent ATPase Ris1 [Aspergillus oryzae RIB40] Length = 1090 Score = 101 bits (252), Expect = 7e-20, Method: Composition-based stats. Identities = 31/165 (18%), Positives = 66/165 (40%), Gaps = 21/165 (12%) Query: 45 EKHWKEVHDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQ----------KAFPQG- 91 EK W V KI+ I+ + I+ F S L L+ + + Sbjct: 912 EKTW--VSSAKIEKAMDILRGIQEGEEKTIIFSQFTSLLDLLEVPIVRQGWGYRRYDGSM 969 Query: 92 RTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERI 151 + D++ + + ++ + GLNL + ++ F +W+ +Q I+R Sbjct: 970 KPGDRNSAVLDFTDSPDCKIILVSLKAGNSGLNL-VAASQVIIFDPFWNPYIEEQAIDR- 1027 Query: 152 GVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + G R V ++ ++ QNT+++ +L+ K + + L+ Sbjct: 1028 ----AHRIGQVREVQIHRILVQNTVEDRILELQDKKRELIEGALD 1068 >gi|145357178|ref|XP_001422798.1| predicted protein [Ostreococcus lucimarinus CCE9901] gi|144583042|gb|ABP01157.1| predicted protein [Ostreococcus lucimarinus CCE9901] Length = 806 Score = 101 bits (252), Expect = 7e-20, Method: Composition-based stats. Identities = 25/155 (16%), Positives = 56/155 (36%), Gaps = 19/155 (12%) Query: 56 IKALEVIIEKANAA--PIIVAYHFNSDLARLQKAFPQGR----------TLDKDPCTIQE 103 + AL + + N IV + + + ++ + + + + +Q Sbjct: 639 VNALRDMRNQENGHLNKAIVFSQYTAMIEIVEWRLKKAKFTIAKLLGSMPVTQRAANLQA 698 Query: 104 W-NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFK 162 + + + ++ S G GLNLQ N + WW+ Q + R + G Sbjct: 699 FREDPNVSVILMSLKSGGEGLNLQ-AANYVYVLEPWWNPAVEMQAV-----MRAHRIGQL 752 Query: 163 RAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 R V + TI+E +++ K + + ++ Sbjct: 753 RPVTAVRFSTKGTIEERMMELQEKKQLVFEGCMDG 787 >gi|115441433|ref|NP_001044996.1| Os01g0881000 [Oryza sativa Japonica Group] gi|56784632|dbj|BAD81679.1| putative chromatin remodeling factor CHD3 [Oryza sativa Japonica Group] gi|113534527|dbj|BAF06910.1| Os01g0881000 [Oryza sativa Japonica Group] Length = 1150 Score = 101 bits (252), Expect = 7e-20, Method: Composition-based stats. Identities = 44/224 (19%), Positives = 89/224 (39%), Gaps = 37/224 (16%) Query: 8 QRELYCDLQGENIEAFNSASKTVK----------CLQLANGAVYYDEEKHWKEV------ 51 QRELY ++ N NSA + + + N V + + E Sbjct: 781 QRELYINILERNYSKLNSAIRNGRKLSLNNILMELRKCCNHPVGLEVGQQATEDVFLSLI 840 Query: 52 -HDEKIKALEVIIEKAN--AAPIIVAYHFNSDLARL---------QKAFPQGRT-LDKDP 98 K++ L ++ + +++ L L + A G+T L Sbjct: 841 ASSGKLQLLHKLLPRLKERGNRVLIFSQMTRMLDILEDFLCSLGYKYARIDGQTSLSARQ 900 Query: 99 CTIQEWNE--GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 +I+E+ + + + G G++L G + ++ + ++ Q +R Sbjct: 901 ESIEEYKNIDSETFIFLMSTRAGGMGVDL-PGADRVIIYDPDFNPFMDLQA-----QSRA 954 Query: 157 RQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKK 200 + G R V VY LI + +++E +LQ+ + K I+++L+N+ KK Sbjct: 955 HRIGQTRPVVVYQLITKCSVEEKILQKSKQKLAIENMLMNSSKK 998 >gi|154316345|ref|XP_001557494.1| hypothetical protein BC1G_03758 [Botryotinia fuckeliana B05.10] gi|150846544|gb|EDN21737.1| hypothetical protein BC1G_03758 [Botryotinia fuckeliana B05.10] Length = 917 Score = 101 bits (251), Expect = 7e-20, Method: Composition-based stats. Identities = 39/169 (23%), Positives = 63/169 (37%), Gaps = 22/169 (13%) Query: 50 EVHDEKIKALEVII---EKANAAPIIVAYHFNSDLARLQKAF---------PQGRTLDKD 97 V K + L ++ K+ I++ ++ S L L G T Sbjct: 595 VVASSKFRVLNRMLMRLSKSTTEKIVIVSNYTSTLDLLVSHLSSLNLPFLRLDGSTPQAK 654 Query: 98 PCT-IQEWN---EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGV 153 + +N K S G G+NL G + LV F + W+ Q + RI Sbjct: 655 RQDLVNTFNKTPASKYFAFLLSAKSGGAGINL-IGASRLVLFDVDWNPATDLQAMARI-- 711 Query: 154 TRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKET 202 + G KR V +Y + +DE + QR TK + D +++ K E Sbjct: 712 ---HRDGQKRPVKIYRFLMSGGMDEKIYQRQVTKMGLADSVMDGKKNEA 757 >gi|836793|dbj|BAA09277.1| unnamed protein product [Saccharomyces cerevisiae] Length = 778 Score = 101 bits (251), Expect = 7e-20, Method: Composition-based stats. Identities = 30/162 (18%), Positives = 66/162 (40%), Gaps = 20/162 (12%) Query: 52 HDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQK---------AFPQGRTLDKDPCT 100 K++ L+ +I + +++ F + L ++ G ++ Sbjct: 601 TSGKLQILQKLIPPLISEGHKVLIYSQFVNMLDLIEDWCDLNSFATFRIDGSVNNETRKD 660 Query: 101 -IQEWNE--GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 ++++N K + + G G+NL G + +V F W+ + Q ++R Sbjct: 661 QLEKFNSSKDKHNIFLLSTRAAGLGINL-VGADTVVLFDSDWNPQVDLQAMDRC-----H 714 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 + G + V VY L NTI+ ++L R K ++ +++ K Sbjct: 715 RIGQESPVIVYRLCCDNTIEHVILTRAANKRNLERMVIQMGK 756 >gi|91090218|ref|XP_968156.1| PREDICTED: similar to E1a binding protein P400 [Tribolium castaneum] Length = 2612 Score = 101 bits (251), Expect = 7e-20, Method: Composition-based stats. Identities = 33/189 (17%), Positives = 75/189 (39%), Gaps = 19/189 (10%) Query: 22 AFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNS 79 A ++ ++A+ V + + K++ L+ ++ K + +++ Sbjct: 1427 AACLSAPATSLHRIASAMVTQFPDPRLIQYDCGKLQTLDKLLRKLKSEGHRVLIFTQMTK 1486 Query: 80 DLARLQK----------AFPQGRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYG 128 L L+ +D+ ++ +N + +I S G G+NL G Sbjct: 1487 MLDVLEAFLNFHGHIYLRLDGTTKVDQRQLLMERFNGDTRIFAFILSTRSGGIGVNLT-G 1545 Query: 129 GNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKS 188 + ++F+ W+ Q +R + G R V +Y L+++ TI+E +L++ K Sbjct: 1546 ADTVIFYDSDWNPTMDAQAQDRC-----HRIGQTRDVHIYRLVSERTIEENILKKANQKR 1600 Query: 189 TIQDLLLNA 197 + DL + Sbjct: 1601 LLGDLAIEG 1609 >gi|70992713|ref|XP_751205.1| SWI/SNF family DNA-dependent ATPase Ris1 [Aspergillus fumigatus Af293] gi|66848838|gb|EAL89167.1| SWI/SNF family DNA-dependent ATPase Ris1, putative [Aspergillus fumigatus Af293] Length = 1376 Score = 101 bits (251), Expect = 7e-20, Method: Composition-based stats. Identities = 30/165 (18%), Positives = 69/165 (41%), Gaps = 19/165 (11%) Query: 45 EKHWKEVH--DEKIKALEVIIEKANAAPIIVAYHFNSDLARLQ----------KAFPQG- 91 EK W ++ ++ L+ I ++ ++ I+ F + L L+ + + Sbjct: 1068 EKTWVTSAKIEKTLEILQEIQDREDSEKTIIFSQFTALLDLLEVPIVRRGWGYRRYDGSM 1127 Query: 92 RTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERI 151 R D++ ++ + ++ + GLNL + ++ F +W+ Q I+R Sbjct: 1128 RPGDRNAAVLEFTDNPDCKIMLVSLKAGNAGLNL-VAASQVIIFDPFWNPYIEDQAIDR- 1185 Query: 152 GVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + G R V ++ ++ Q T+++ +L+ K I D L+ Sbjct: 1186 ----AHRIGQMRQVHIHRILVQKTVEDRILELQEKKREIIDGALD 1226 >gi|242774780|ref|XP_002478510.1| SNF2 family helicase/ATPase PasG, putative [Talaromyces stipitatus ATCC 10500] gi|218722129|gb|EED21547.1| SNF2 family helicase/ATPase PasG, putative [Talaromyces stipitatus ATCC 10500] Length = 895 Score = 101 bits (251), Expect = 7e-20, Method: Composition-based stats. Identities = 31/174 (17%), Positives = 65/174 (37%), Gaps = 23/174 (13%) Query: 43 DEEKHWKEV---HDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQK----------- 86 D+ E K+ L+ ++ I++ F + L +Q Sbjct: 639 DDSSTVDETLVTASGKMLLLDRLVPCLMQKGHKILIFSQFKTQLDLIQDWATQLRGWNCC 698 Query: 87 AFPQGRTLDKDPCTIQEWNEGKI-PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQ 145 G + I+ +N K + + G G+NL + ++ F W+ ++ Sbjct: 699 RIDGGVSQIDRRAQIKAFNTDKNFKIFLLSTRAGGQGINLT-AADTVILFDSDWNPQQDL 757 Query: 146 QMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 Q R + G R V VY L + T+++ +L++ +K ++ L++ K Sbjct: 758 QA-----QDRAHRIGQTRPVIVYRLATKGTVEQTLLEKADSKRRLERLVIQKGK 806 >gi|159130340|gb|EDP55453.1| SWI/SNF family DNA-dependent ATPase Ris1, putative [Aspergillus fumigatus A1163] Length = 1374 Score = 101 bits (251), Expect = 7e-20, Method: Composition-based stats. Identities = 30/165 (18%), Positives = 69/165 (41%), Gaps = 19/165 (11%) Query: 45 EKHWKEVH--DEKIKALEVIIEKANAAPIIVAYHFNSDLARLQ----------KAFPQG- 91 EK W ++ ++ L+ I ++ ++ I+ F + L L+ + + Sbjct: 1066 EKTWVTSAKIEKTLEILQEIQDREDSEKTIIFSQFTALLDLLEVPIVRRGWGYRRYDGSM 1125 Query: 92 RTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERI 151 R D++ ++ + ++ + GLNL + ++ F +W+ Q I+R Sbjct: 1126 RPGDRNAAVLEFTDNPDCKIMLVSLKAGNAGLNL-VAASQVIIFDPFWNPYIEDQAIDR- 1183 Query: 152 GVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + G R V ++ ++ Q T+++ +L+ K I D L+ Sbjct: 1184 ----AHRIGQMRQVHIHRILVQKTVEDRILELQEKKREIIDGALD 1224 >gi|220673001|emb|CAX12380.1| SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5 [Danio rerio] gi|220678449|emb|CAX12948.1| SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5 [Danio rerio] Length = 1035 Score = 101 bits (251), Expect = 7e-20, Method: Composition-based stats. Identities = 45/230 (19%), Positives = 90/230 (39%), Gaps = 40/230 (17%) Query: 1 MKQY---HKFQRELYCDLQGENIEAFNSASKTVK------CLQL--ANGAVYYDEEKHW- 48 +K Y K QRE Y + ++I+ NSA K K +QL Y + Sbjct: 393 IKIYVGLSKMQREWYTKILMKDIDILNSAGKMDKMRLLNVLMQLRKCCNHPYLFDGAEPG 452 Query: 49 --------KEVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQ---------KAFP 89 V+ K+ L+ ++ K + +++ L L+ Sbjct: 453 PPYTTDLHLVVNSGKMVVLDKLLPKLKEQGSRVLIFSQMTRVLDILEDYCMWRNYGYCRL 512 Query: 90 QGRTLDKDPC-TIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 G+T ++ +I +NE L + G G+NL ++++ + W+ + Q Sbjct: 513 DGQTPHEERQISINAFNEPNSSKFLFMLSTRAGGLGINL-ATADVVIIYDSDWNPQVDLQ 571 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 ++R + G K+ V V+ I NT++E +++R K + +++ Sbjct: 572 AMDR-----AHRIGQKKQVRVFRFITDNTVEERIVERAEMKLRLDSIVIQ 616 >gi|326489199|dbj|BAK01583.1| predicted protein [Hordeum vulgare subsp. vulgare] gi|326497361|dbj|BAK02265.1| predicted protein [Hordeum vulgare subsp. vulgare] Length = 838 Score = 101 bits (251), Expect = 7e-20, Method: Composition-based stats. Identities = 30/156 (19%), Positives = 55/156 (35%), Gaps = 21/156 (13%) Query: 52 HDEKIKALEV----IIEKANAAPIIVAYHFNSDLARLQKAFPQGRTL----------DKD 97 KI AL +IE +A IV F S L ++ + + + Sbjct: 665 TSTKIDALREEIRNMIEHDGSAKGIVFSQFTSFLDLIEFSLQRSGIKCVQLNGKMNMVEK 724 Query: 98 PCTIQEW-NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 I + N+ + + G LNL + + WW+ Q +RI Sbjct: 725 GRAIDTFINDPDCRIFLMSLKAGGVALNLTVASH-VFLMDPWWNPAVESQAQDRI----- 778 Query: 157 RQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQD 192 + G + + + ++T++E +LQ K + D Sbjct: 779 HRIGQFKPIRSTRFVIKDTVEERILQLQEKKQLVFD 814 >gi|37542684|gb|AAL47211.1| chromatin-remodeling factor CHD3 [Oryza sativa] Length = 1360 Score = 101 bits (251), Expect = 7e-20, Method: Composition-based stats. Identities = 38/224 (16%), Positives = 77/224 (34%), Gaps = 37/224 (16%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE- 60 K Y R G ++ N ++ +L A DE + + + LE Sbjct: 555 KNYEVLTRR-----SGGHVSLINV---VMELRKLCCHAFMTDEPEEPANSEEALRRLLES 606 Query: 61 ----VIIEKA------NAAPIIVAYHFNSDLARLQKAF---------PQGRTLDKDPCT- 100 +++K +++ F L L+ G+ + Sbjct: 607 SGKMELLDKMMVKLKEQGHRVLIYSQFQHMLDLLEDYLSYRKWSYERIDGKIGGAERQIR 666 Query: 101 IQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQ 158 I +N + G G+NL + ++ + W+ Q + R + Sbjct: 667 IDRFNAKNSTRFCFLLSTRAGGLGINL-ATADTVIIYDSDWNPHADLQAMAR-----AHR 720 Query: 159 AGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKET 202 G V +Y L+++ TI+E ++Q + K ++ L++ L K T Sbjct: 721 LGQTSKVMIYRLVSRGTIEERMMQLTKKKMVLEHLVVGRLTKGT 764 >gi|328786654|ref|XP_624551.3| PREDICTED: DNA repair and recombination protein RAD54B-like [Apis mellifera] Length = 821 Score = 101 bits (251), Expect = 7e-20, Method: Composition-based stats. Identities = 33/157 (21%), Positives = 65/157 (41%), Gaps = 22/157 (14%) Query: 55 KIKALEVIIE---KANAAPIIVAYHFNSDLARLQK----------AFPQGRTLDKDPCTI 101 KI ++ +I+ K N ++++Y + L L++ T I Sbjct: 554 KISIVQTLIKNLKKTNEKLVLISY-YTQTLDLLERVCNMECLQFLRLDGNTTSSTRSKII 612 Query: 102 QEWN--EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQA 159 +++N + + G GLNL G + L+ F W+ Q + RI + Sbjct: 613 EQFNSTNDNNKIFLLSAKAGGVGLNL-PGASRLILFDSDWNPASDSQAMARIW-----RD 666 Query: 160 GFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 G K V++ L+ TI+E + QR K+ + + +++ Sbjct: 667 GQKNDVYILRLLTTGTIEEKIFQRQINKANLSETVID 703 >gi|328705070|ref|XP_001948023.2| PREDICTED: DNA repair and recombination protein RAD54-like [Acyrthosiphon pisum] Length = 751 Score = 101 bits (251), Expect = 7e-20, Method: Composition-based stats. Identities = 32/153 (20%), Positives = 59/153 (38%), Gaps = 18/153 (11%) Query: 56 IKALEVIIEKANAAPIIVAYHFNSDLA---RLQK-------AFPQGRTLDKDPCTIQEWN 105 + + +I+ +++ ++ L RL K T K + + N Sbjct: 489 LDTMLAVIKTTTTDRVVLISNYTQTLELFERLAKLRNYTFVRLDGSMTAKKRAKAVDDIN 548 Query: 106 EGKIPLLF--AHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKR 163 + + G GLNL G N LV F W+ Q + R+ + G K+ Sbjct: 549 SPTSGVFLFMLSSKAGGCGLNL-IGANRLVMFDPDWNPANDDQAMARVW-----RDGQKK 602 Query: 164 AVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 FVY +A +I+E ++QR K + +++ Sbjct: 603 PCFVYRFLATGSIEEKMMQRQAHKKALSSSVVD 635 >gi|291408167|ref|XP_002720326.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent regulator of chromatin a1-like isoform 1 [Oryctolagus cuniculus] Length = 1053 Score = 101 bits (251), Expect = 7e-20, Method: Composition-based stats. Identities = 43/242 (17%), Positives = 90/242 (37%), Gaps = 52/242 (21%) Query: 1 MKQY---HKFQRELYCDLQGENIEAFNSASKTVK------CLQL---ANGAVYYD----- 43 +K Y K QRE Y + ++I+ NS+ K K +QL N +D Sbjct: 412 IKIYLGLSKMQREWYTKILMKDIDVLNSSGKMDKMRLLNILMQLRKCCNHPYLFDGAEPG 471 Query: 44 ---EEKHWKEVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQ---------KAFP 89 + K+ L+ ++ K + +++ L L+ Sbjct: 472 PPYTTDEHIVNNSGKMLVLDKLLAKLKEQGSRVLIFSQMTRLLDILEDYCMWRGYEYCRL 531 Query: 90 QGRTLDKDPCT-------------IQEWN--EGKIPLLFAHPASCGHGLNLQYGGNILVF 134 G+T ++ I+ +N + + G G+NL ++++ Sbjct: 532 DGQTPHEEREDKFLEVELLGQREAIEAFNVPNSSKFIFMLSTRAGGLGINL-ASADVVIL 590 Query: 135 FSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 + W+ + Q ++R + G K+ V V+ LI NT++E +++R K + ++ Sbjct: 591 YDSDWNPQVDLQAMDR-----AHRIGQKKPVRVFRLITDNTVEERIVERAEIKLRLDSIV 645 Query: 195 LN 196 + Sbjct: 646 IQ 647 >gi|125995400|ref|NP_001075098.1| SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 [Danio rerio] gi|124481629|gb|AAI33098.1| SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5 [Danio rerio] Length = 1028 Score = 101 bits (251), Expect = 7e-20, Method: Composition-based stats. Identities = 45/230 (19%), Positives = 90/230 (39%), Gaps = 40/230 (17%) Query: 1 MKQY---HKFQRELYCDLQGENIEAFNSASKTVK------CLQL--ANGAVYYDEEKHW- 48 +K Y K QRE Y + ++I+ NSA K K +QL Y + Sbjct: 386 IKIYVGLSKMQREWYTKILMKDIDILNSAGKMDKMRLLNVLMQLRKCCNHPYLFDGAEPG 445 Query: 49 --------KEVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQ---------KAFP 89 V+ K+ L+ ++ K + +++ L L+ Sbjct: 446 PPYTTDLHLVVNSGKMVVLDKLLPKLKEQGSRVLIFSQMTRVLDILEDYCMWRNYGYCRL 505 Query: 90 QGRTLDKDPC-TIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 G+T ++ +I +NE L + G G+NL ++++ + W+ + Q Sbjct: 506 DGQTPHEERQISINAFNEPNSSKFLFMLSTRAGGLGINL-ATADVVIIYDSDWNPQVDLQ 564 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 ++R + G K+ V V+ I NT++E +++R K + +++ Sbjct: 565 AMDR-----AHRIGQKKQVRVFRFITDNTVEERIVERAEMKLRLDSIVIQ 609 >gi|71649857|ref|XP_813640.1| transcription activator [Trypanosoma cruzi strain CL Brener] gi|70878541|gb|EAN91789.1| transcription activator, putative [Trypanosoma cruzi] Length = 1092 Score = 101 bits (251), Expect = 7e-20, Method: Composition-based stats. Identities = 42/232 (18%), Positives = 83/232 (35%), Gaps = 42/232 (18%) Query: 8 QRELYCDLQGENIEAFNSAS---------KTVKCLQLANGAVYYDEE--------KHWKE 50 QR+ Y + ++ EA N AS + ++ N D Sbjct: 390 QRKWYMHVLAKDAEALNKASGGSMSSLTNIMMNLRKVINHPYMMDGGEEGPPFITDERIV 449 Query: 51 VHDEKIKALEVII-----EKANAAPIIVAYHFNSDLARLQK---------AFPQGRT--L 94 H K+ L+ ++ EK +++ F + L L+ G T Sbjct: 450 KHSGKMMILDKLLYRLRREKEEKHKVLIFSQFTTMLDILEDYCGMRGFRVCRIDGNTSGY 509 Query: 95 DKDPCTIQEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIG 152 D+D + +N + + G G+NLQ ++++ + W+ + Q Sbjct: 510 DRDAQ-MAAFNSPNSDYFIFLLSTRAGGLGINLQAANHVVI-YDSDWNPQMDLQA----- 562 Query: 153 VTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIH 204 R + G KR V VY I + T++E + +R K + +++ + + Sbjct: 563 QDRAHRIGQKRVVRVYRFITEGTVEEKIYRRALKKLYLDAMVVQHGRMQGRG 614 >gi|258577009|ref|XP_002542686.1| hypothetical protein UREG_02202 [Uncinocarpus reesii 1704] gi|237902952|gb|EEP77353.1| hypothetical protein UREG_02202 [Uncinocarpus reesii 1704] Length = 1203 Score = 101 bits (251), Expect = 7e-20, Method: Composition-based stats. Identities = 33/165 (20%), Positives = 61/165 (36%), Gaps = 20/165 (12%) Query: 51 VHDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQK-----------AFPQGRTLDKD 97 V K++ ++ +IE K ++ L L+K + Sbjct: 742 VKSGKMQVVKSLIELWKETGHKTLLFAQHRIMLDILEKFMKSLPGFNYRRMDGNTPIKIR 801 Query: 98 PCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 + E+N + I + G G+NL G + ++ + W+ Q ER Sbjct: 802 QSIVDEFNTDPDIHVFLLTTKVGGLGVNLT-GADRVIIYDPDWNPSTDLQARERAW---- 856 Query: 157 RQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 + G KR V +Y L+ TI+E + R K + + +L K+ Sbjct: 857 -RLGQKREVTIYRLMTAGTIEEKIYHRQIFKQFLTNKILKDPKQR 900 >gi|195582827|ref|XP_002081227.1| GD10909 [Drosophila simulans] gi|194193236|gb|EDX06812.1| GD10909 [Drosophila simulans] Length = 1001 Score = 101 bits (251), Expect = 7e-20, Method: Composition-based stats. Identities = 43/225 (19%), Positives = 89/225 (39%), Gaps = 37/225 (16%) Query: 6 KFQRELYCDLQGENIEAFNSASKTVK------CLQL---ANGAVYYD--------EEKHW 48 K QR+ Y + ++I+ N A K K +QL N +D Sbjct: 366 KMQRDWYTKVLLKDIDVVNGAGKVEKMRLQNILMQLRKCTNHPYLFDGAEPGPPYTTDTH 425 Query: 49 KEVHDEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQ---------KAFPQGRTLDKD 97 + K+ L+ ++ K + +++ L L+ G+T +D Sbjct: 426 LVYNSGKMAILDKLLPKLQEQGSRVLIFSQMTRMLDILEDYCHWRNYNYCRLDGQTPHED 485 Query: 98 P-CTIQEWN--EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 IQE+N L + G G+NL ++++ + W+ + Q ++R Sbjct: 486 RNRQIQEFNMDNSAKFLFMLSTRAGGLGINL-ATADVVIIYDSDWNPQMDLQAMDR---- 540 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 + G K+ V V+ LI ++T++E +++R K + +++ + Sbjct: 541 -AHRIGQKKQVRVFRLITESTVEEKIVERAEVKLRLDKMVIQGGR 584 >gi|310801698|gb|EFQ36591.1| SNF2 family domain-containing protein [Glomerella graminicola M1.001] Length = 1773 Score = 101 bits (251), Expect = 7e-20, Method: Composition-based stats. Identities = 29/166 (17%), Positives = 69/166 (41%), Gaps = 19/166 (11%) Query: 44 EEKHWKEVHDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQK----------AFPQG 91 +K + K++AL+ ++ +A ++ L L++ Sbjct: 1437 PDKRLLQYDCGKLQALDKLLRKLQAGGHRALIFTQMTKVLDILEQFLNIHGHKYLRLDGA 1496 Query: 92 RTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 +++ +N + +I S G G+NL G + ++F+ W+ +Q +R Sbjct: 1497 TKIEQRQILTDRFNHDPRILCFILSTRSGGLGINLT-GADTVIFYDQDWNPAMDKQCQDR 1555 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + G R V +Y L++++TI+ +L++ K + D+++ Sbjct: 1556 C-----HRIGQTRDVHIYRLVSEHTIEANILRKASQKQMLDDVVIQ 1596 >gi|302420893|ref|XP_003008277.1| helicase SWR1 [Verticillium albo-atrum VaMs.102] gi|261353928|gb|EEY16356.1| helicase SWR1 [Verticillium albo-atrum VaMs.102] Length = 1183 Score = 101 bits (251), Expect = 7e-20, Method: Composition-based stats. Identities = 31/166 (18%), Positives = 70/166 (42%), Gaps = 19/166 (11%) Query: 44 EEKHWKEVHDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAF---------PQGR 92 +K + K++AL+ ++ +A ++ L L++ G Sbjct: 952 PDKRLLQYDCGKLQALDKLLRKLQAGGHRALIFTQMTKVLNILEQFLNIHGHKYLRLDGA 1011 Query: 93 TLDKDPCTI--QEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 T + + + N+ +I S G G+NL G + ++F+ W+ +Q +R Sbjct: 1012 TKVEQRQILTDRFNNDPRILCFILSTRSGGLGINLT-GADTVIFYDQDWNPAMDKQCQDR 1070 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + G R V +Y L++++TI+ +L++ K + D+++ Sbjct: 1071 C-----HRIGQTRDVHIYRLVSEHTIEANILRKASQKQMLDDVVIQ 1111 >gi|134108572|ref|XP_777237.1| hypothetical protein CNBB4670 [Cryptococcus neoformans var. neoformans B-3501A] gi|50259922|gb|EAL22590.1| hypothetical protein CNBB4670 [Cryptococcus neoformans var. neoformans B-3501A] Length = 1399 Score = 101 bits (251), Expect = 7e-20, Method: Composition-based stats. Identities = 46/183 (25%), Positives = 75/183 (40%), Gaps = 32/183 (17%) Query: 33 LQLANGAVYYDEEKHWKEVHDEKIKALEV----IIEKANAAPIIVAYHFNSDLARLQKAF 88 LQ N V ++ + K+K L IIE+ + IIV F + L F Sbjct: 1201 LQAVNDEVSIED-----VLPSTKMKKLGELIDAIIEQDPSQKIIVFSQFVEYID-LCSIF 1254 Query: 89 PQGRTL-----------DKDPCTIQEWN----EGKIP-LLFAHPASCGHGLNLQYGGNIL 132 + R + D+ TI+++N E K P L G GLNL N + Sbjct: 1255 LRRRNIPHAKYVGSMKQDEREDTIKDFNRPMEEDKSPRCLLMSLKCGGVGLNLCI-ANHV 1313 Query: 133 VFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQD 192 + L W+ Q ++R + G R V V+ L+ +NTID+ +++ + K + D Sbjct: 1314 ICLDLAWNAATENQAVDR-----AHRIGQTREVVVHRLVVENTIDQRLMELQQQKQALSD 1368 Query: 193 LLL 195 + Sbjct: 1369 GAM 1371 >gi|157870081|ref|XP_001683591.1| DNA repair and recombination protein RAD54 [Leishmania major strain Friedlin] gi|68126657|emb|CAJ04466.1| putative DNA repair and recombination protein RAD54 [Leishmania major strain Friedlin] Length = 1127 Score = 101 bits (251), Expect = 7e-20, Method: Composition-based stats. Identities = 29/151 (19%), Positives = 57/151 (37%), Gaps = 18/151 (11%) Query: 58 ALEVIIEKANAAPIIVAYHFNSDLARLQKA----------FPQGRTLDKDPCTIQEWNEG 107 L+ + +++ +F L + + K + +N Sbjct: 800 VLDELKGNGEHDKLVIVSNFTQTLDIIAALCNSKQIAYFQLDGSTPIKKRQQLVDYFNVP 859 Query: 108 KIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 + + G GLNL G N L+ F W+ Q + R+ + G K+ V Sbjct: 860 GSQEIVFLLSSKAGGVGLNL-IGANRLILFDPDWNPANDAQAMGRVW-----RDGQKKCV 913 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 F+Y L++ TI+E + QR +K + +++ Sbjct: 914 FIYRLLSTGTIEEKIYQRQVSKQGLSANVVD 944 >gi|293354700|ref|XP_002728549.1| PREDICTED: SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1 [Rattus norvegicus] Length = 1094 Score = 101 bits (251), Expect = 7e-20, Method: Composition-based stats. Identities = 42/230 (18%), Positives = 86/230 (37%), Gaps = 40/230 (17%) Query: 1 MKQY---HKFQRELYCDLQGENIEAFNSASKTVK------CLQL--ANGAVYYDEEKHW- 48 +K Y K QRE Y + ++I+ NSA K K +QL Y + Sbjct: 256 VKIYVGLSKMQREWYTRILMKDIDILNSAGKMDKMRLLNILMQLRKCCNHPYLFDGAEPG 315 Query: 49 --------KEVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQ---------KAFP 89 + K+ L+ ++ K + +++ L L+ Sbjct: 316 PPYTTDMHLVTNSGKMVVLDKLLPKLKEQGSRVLIFSQMTRVLDILEDYCMWRNYEYCRL 375 Query: 90 QGRTLDKDPCT-IQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 G+T + I +NE + + G G+NL ++++ + W+ + Q Sbjct: 376 DGQTPHDERQDSINAYNEPNSTKFVFMLSTRAGGLGINL-ATADVVILYDSDWNPQVDLQ 434 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 ++R + G + V V+ I NT++E +++R K + +++ Sbjct: 435 AMDR-----AHRIGQTKTVRVFRFITDNTVEERIVERAEMKLRLDSIVIQ 479 >gi|145350886|ref|XP_001419826.1| predicted protein [Ostreococcus lucimarinus CCE9901] gi|144580058|gb|ABO98119.1| predicted protein [Ostreococcus lucimarinus CCE9901] Length = 821 Score = 101 bits (251), Expect = 7e-20, Method: Composition-based stats. Identities = 47/207 (22%), Positives = 75/207 (36%), Gaps = 26/207 (12%) Query: 5 HKFQRELYCDLQG-----ENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKAL 59 + +++ + G ++ E+ + +L N A E K+ L Sbjct: 522 DQLKQKSMLSMLGRIGKTQDAESISPLQAIQTLQKLCNAAALATEVSDPVA-SSSKLAVL 580 Query: 60 EVIIEK-ANAAPIIVAYHFNSDLARLQKA---------FPQGRTLDKDPCTI--QEWNEG 107 + AN I+V F + L + K QG T K+ +I N G Sbjct: 581 RAMFRALANDERIVVVSGFTTTLDLIAKLCESEHLKYDRLQGSTPPKERTSIVRTFNNSG 640 Query: 108 KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFV 167 KI L + G GLNL G N LV W+ Q R+ + G + + Sbjct: 641 KI--LLLSTKAGGVGLNL-VGANRLVLVDSSWNPAHDLQAQARVW-----REGQTKPCSI 692 Query: 168 YYLIAQNTIDELVLQRLRTKSTIQDLL 194 Y L++ TI+E + QR K + L Sbjct: 693 YRLLSTGTIEERMFQRQELKGALARTL 719 >gi|157119050|ref|XP_001659312.1| E1a binding protein P400 [Aedes aegypti] gi|108883212|gb|EAT47437.1| E1a binding protein P400 [Aedes aegypti] Length = 3081 Score = 101 bits (251), Expect = 7e-20, Method: Composition-based stats. Identities = 30/156 (19%), Positives = 66/156 (42%), Gaps = 19/156 (12%) Query: 55 KIKALEVIIEK--ANAAPIIVAYHFNSDLARLQ---------KAFPQGRTLDKDPCTI-Q 102 K++ L+ ++++ + +++ L L+ G T + + + Sbjct: 1625 KLQTLDRLLKQLKSGGHRVLIFTQMTRMLDVLEAFLNYHGHIYLRLDGTTKVEQRQLLME 1684 Query: 103 EWNEGK-IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGF 161 +N K + + S G G+NL G + ++F+ W+ Q +R + G Sbjct: 1685 RFNGDKRVFVFILSTRSGGVGINLT-GADTVIFYDSDWNPTMDAQAQDRC-----HRIGQ 1738 Query: 162 KRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 R V +Y L+++ TI+E +L++ K + DL + Sbjct: 1739 TRDVHIYRLVSEKTIEENILKKANQKRMLGDLAIEG 1774 >gi|168054197|ref|XP_001779519.1| SNF2 family DNA-dependent ATPase [Physcomitrella patens subsp. patens] gi|162669101|gb|EDQ55695.1| SNF2 family DNA-dependent ATPase [Physcomitrella patens subsp. patens] Length = 631 Score = 101 bits (251), Expect = 8e-20, Method: Composition-based stats. Identities = 40/212 (18%), Positives = 78/212 (36%), Gaps = 22/212 (10%) Query: 2 KQYHKFQR-ELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEK--HWKEVHDEKIKA 58 K+YHK C ++ E N + T+ + L G V + K + K +A Sbjct: 395 KKYHKMAVFGNECSVERVREELSNYSDFTLHRMCLTYGGVPGGQGKLDDHHVLASAKCQA 454 Query: 59 LEVIIEKA--NAAPIIVAYHFNSDLARLQKAF---------PQGRTLDKDPCTIQE--WN 105 L ++ + N ++ + + L L+ A G T + + + N Sbjct: 455 LVKLLPQLKKNGHRPLIFSQWTNMLDILEWALAVIGLRFTRLDGSTPVTERQNLVDEYNN 514 Query: 106 EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 I + + G GLNL +++ + ++R R + G + V Sbjct: 515 NPDIFVFLLSTRAGGQGLNLTGADTVIIHD------VDFNPQMDRQAEDRCHRIGQSKPV 568 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 VY L+ T+DE + + + K + +L + Sbjct: 569 TVYRLVTNGTVDESIFRIAQQKLVLDAAVLES 600 >gi|169598354|ref|XP_001792600.1| hypothetical protein SNOG_01979 [Phaeosphaeria nodorum SN15] gi|160704380|gb|EAT90191.2| hypothetical protein SNOG_01979 [Phaeosphaeria nodorum SN15] Length = 1307 Score = 101 bits (251), Expect = 8e-20, Method: Composition-based stats. Identities = 29/163 (17%), Positives = 65/163 (39%), Gaps = 22/163 (13%) Query: 50 EVHDEKIKALEVIIEKAN---AAPIIVAYHFNSDLARLQK----------AFPQGRTLDK 96 K++ L+ ++ + + I++ ++ + L +++ +K Sbjct: 592 HASSTKLRLLDSLVHRIHTTTEEKIVIVSNYTTTLDMIERMLVSLSYTYLRLDGSTPSNK 651 Query: 97 DPCTIQEWNE---GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGV 153 ++++N+ S G GLNL G + +V F + W+ Q + RI Sbjct: 652 RQALVEKFNKTPKAASFAFLLSAKSGGVGLNL-IGASRIVLFDIDWNPATDLQAMARI-- 708 Query: 154 TRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + G K V +Y + + IDE + QR K + + +++ Sbjct: 709 ---HRDGQKLPVKIYRFLVKGGIDEKIYQRQVMKMGLANAVVD 748 >gi|300708443|ref|XP_002996400.1| hypothetical protein NCER_100499 [Nosema ceranae BRL01] gi|239605700|gb|EEQ82729.1| hypothetical protein NCER_100499 [Nosema ceranae BRL01] Length = 664 Score = 101 bits (251), Expect = 8e-20, Method: Composition-based stats. Identities = 28/153 (18%), Positives = 62/153 (40%), Gaps = 18/153 (11%) Query: 56 IKALEVI-IEKANAAPIIVAYHFNSDLARLQKAFPQGR----------TLDKDPCTIQEW 104 ++ L + K N IV + + L L+ + +++ I+++ Sbjct: 499 VQKLTELNTNKNNLEKSIVFSQYVNFLEILRWRLERAGFRCVVIYGNMPINQRKAAIEKF 558 Query: 105 NEG-KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKR 163 N I + + G LNL N + LWW+ +Q ++RI + G R Sbjct: 559 NTDHNITVFLISLKAGGVALNLTEANN-VFLMDLWWNPAVEEQAMDRI-----HRIGQHR 612 Query: 164 AVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + ++ +I +N+I+ +L+ + K + + + Sbjct: 613 PIKIHRVIIENSIESKILELQKKKKALFESSVE 645 >gi|308067058|ref|YP_003868663.1| Hypothetical helicase [Paenibacillus polymyxa E681] gi|305856337|gb|ADM68125.1| Hypothetical helicase [Paenibacillus polymyxa E681] Length = 987 Score = 101 bits (251), Expect = 8e-20, Method: Composition-based stats. Identities = 39/233 (16%), Positives = 79/233 (33%), Gaps = 41/233 (17%) Query: 2 KQYHKFQRELYCDLQG-ENIEAFNS-ASKTVKCLQLANGAV--------------YYDEE 45 Y + +EL +Q E IE + S + QL + Y + Sbjct: 739 ALYDQIVKELMERMQKLEGIERKGAILSALTQLKQLCDHPALLTKEAPPDTAASGYSPSD 798 Query: 46 KHWKEVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQKAFPQ----------GRT 93 K++ + ++++ ++ + LQ+ Q G T Sbjct: 799 LEAVISRSSKLERILAMVKELREEGERCLIFTQYIGMGQMLQRVLAQELQEPVLYLNGST 858 Query: 94 LDK-DPCTIQEWNEGKIP------LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 I ++ +P + + G GLNL N + F WW+ Q Sbjct: 859 SKTARDRMIDQFQSHTLPPAEQPSVFILSLKAGGVGLNLT-AANHVFHFDRWWNPAVENQ 917 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 +R + G + V V+ I+ T++E + + L +K + D ++ + + Sbjct: 918 ATDR-----AYRMGQTKDVQVHKFISLGTLEERIDEMLESKQQLSDQIITSTE 965 >gi|255710645|ref|XP_002551606.1| KLTH0A03410p [Lachancea thermotolerans] gi|238932983|emb|CAR21164.1| KLTH0A03410p [Lachancea thermotolerans] Length = 806 Score = 101 bits (251), Expect = 8e-20, Method: Composition-based stats. Identities = 29/159 (18%), Positives = 64/159 (40%), Gaps = 20/159 (12%) Query: 52 HDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQK---------AFPQGRTLDKDPCT 100 K++ L+ ++ A +++ F S L ++ G ++ Sbjct: 559 TSGKLQILQQLVPPLVAKKHKVLIFTQFVSMLDLIEDWCELNEIRVCRIDGSMDNEARQE 618 Query: 101 -IQEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 I+ +N+G + G G+NL + +V F W+ + Q ++R Sbjct: 619 HIERFNDGHDSYDAFLISTRAGGLGINLT-AADTVVLFDSDWNPQVDLQAMDR-----TH 672 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + G + V VY L NT++ ++L R +K ++ +++ Sbjct: 673 RIGQTKPVIVYRLCCDNTVEHVILTRAASKRKLEKMVIQ 711 >gi|322827781|gb|EFZ31794.1| transcription activator, putative [Trypanosoma cruzi] Length = 1087 Score = 101 bits (251), Expect = 8e-20, Method: Composition-based stats. Identities = 42/232 (18%), Positives = 83/232 (35%), Gaps = 42/232 (18%) Query: 8 QRELYCDLQGENIEAFNSAS---------KTVKCLQLANGAVYYDEE--------KHWKE 50 QR+ Y + ++ EA N AS + ++ N D Sbjct: 385 QRKWYMHVLAKDAEALNKASGGSMSSLTNIMMNLRKVINHPYMMDGGEEGPPFITDERIV 444 Query: 51 VHDEKIKALEVII-----EKANAAPIIVAYHFNSDLARLQK---------AFPQGRT--L 94 H K+ L+ ++ EK +++ F + L L+ G T Sbjct: 445 KHSGKMMILDKLLYRLRREKEEKHKVLIFSQFTTMLDILEDYCGMRGFRVCRIDGNTSGY 504 Query: 95 DKDPCTIQEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIG 152 D+D + +N + + G G+NLQ ++++ + W+ + Q Sbjct: 505 DRDAQ-MAAFNSPNSDYFIFLLSTRAGGLGINLQAANHVVI-YDSDWNPQMDLQA----- 557 Query: 153 VTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIH 204 R + G KR V VY I + T++E + +R K + +++ + + Sbjct: 558 QDRAHRIGQKRVVRVYRFITEGTVEEKIYRRALKKLYLDAMVVQHGRMQGRG 609 >gi|303271827|ref|XP_003055275.1| predicted protein [Micromonas pusilla CCMP1545] gi|226463249|gb|EEH60527.1| predicted protein [Micromonas pusilla CCMP1545] Length = 571 Score = 101 bits (251), Expect = 8e-20, Method: Composition-based stats. Identities = 36/201 (17%), Positives = 75/201 (37%), Gaps = 39/201 (19%) Query: 27 SKTVKCLQLANGAVYY------DEEKHWKEVHDE--KIKALEVIIEKAN--AAPIIVAYH 76 S ++ + N + ++ +E+ + K+ L+ I+ + +++ Sbjct: 349 SLLMQLRKCCNHPFLFAGTDVPEDGVPIEELVEASGKLAVLDRILRRLKDAGHRVVLFSQ 408 Query: 77 FNSDLARL--------------------QKAFPQGRT-LDKDPCTIQEWNEGKIPLL--F 113 F S L L + A G T + I +N P+ Sbjct: 409 FTSMLDILSDFLTLRGYQARSIHWFPYDRYARLDGSTNRVQRSVDIAAFNRPNSPMFAFL 468 Query: 114 AHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQ 173 + G G+NLQ + + F W+ + Q + R+ + G K+ V VY LI Sbjct: 469 LSTRAGGLGVNLQT-ADTCILFDSDWNPQVDTQAMARV-----HRIGQKKPVHVYRLITA 522 Query: 174 NTIDELVLQRLRTKSTIQDLL 194 ++++E + QR K ++ ++ Sbjct: 523 DSVEERMQQRAEKKLFLEQMV 543 >gi|195485258|ref|XP_002091017.1| GE12485 [Drosophila yakuba] gi|194177118|gb|EDW90729.1| GE12485 [Drosophila yakuba] Length = 1027 Score = 101 bits (251), Expect = 8e-20, Method: Composition-based stats. Identities = 43/225 (19%), Positives = 89/225 (39%), Gaps = 37/225 (16%) Query: 6 KFQRELYCDLQGENIEAFNSASKTVK------CLQL---ANGAVYYD--------EEKHW 48 K QR+ Y + ++I+ N A K K +QL N +D Sbjct: 366 KMQRDWYTKVLLKDIDVVNGAGKVEKMRLQNILMQLRKCTNHPYLFDGAEPGPPYTTDTH 425 Query: 49 KEVHDEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQ---------KAFPQGRTLDKD 97 + K+ L+ ++ K + +++ L L+ G+T +D Sbjct: 426 LVYNSGKMAILDKLLPKLQEQGSRVLIFSQMTRMLDILEDYCHWRNYNYCRLDGQTPHED 485 Query: 98 P-CTIQEWN--EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 IQE+N L + G G+NL ++++ + W+ + Q ++R Sbjct: 486 RNRQIQEFNMDNSAKFLFMLSTRAGGLGINL-ATADVVIIYDSDWNPQMDLQAMDR---- 540 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 + G K+ V V+ LI ++T++E +++R K + +++ + Sbjct: 541 -AHRIGQKKQVRVFRLITESTVEEKIVERAEVKLRLDKMVIQGGR 584 >gi|167035744|ref|YP_001670975.1| non-specific serine/threonine protein kinase [Pseudomonas putida GB-1] gi|166862232|gb|ABZ00640.1| Non-specific serine/threonine protein kinase [Pseudomonas putida GB-1] Length = 633 Score = 101 bits (251), Expect = 8e-20, Method: Composition-based stats. Identities = 33/195 (16%), Positives = 71/195 (36%), Gaps = 21/195 (10%) Query: 22 AFNSASKTVKCLQLANGAVYYDE-EKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFN 78 A + + D + K + + I+E+ A +I+ F Sbjct: 424 AAATLVALTSLRRFCAHPSLMDSTSGSVDPMSFSKFRRFDEIVEEIFAIGEKVIIFTSFT 483 Query: 79 SDLARLQKAFP----------QGRT-LDKDPCTIQEWNEGKIPLLFA-HPASCGHGLNLQ 126 + + + GR +D I ++ K +P + G GLN+ Sbjct: 484 AMADMIARHIETRYGAFAGVIDGRLAIDDRQPLIDRFSSVKGGAALVLNPKAGGAGLNIT 543 Query: 127 YGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRT 186 N ++ ++ W+ Q R + G + V V+ L+ +T++++V +RLR Sbjct: 544 -AANHVIHYNPEWNPAMEDQASAR-----AYRRGQELPVTVHRLLVSDTVEDVVDERLRR 597 Query: 187 KSTIQDLLLNALKKE 201 K + D + ++ + Sbjct: 598 KRALSDTAVIGVEGK 612 >gi|321251541|ref|XP_003192100.1| DNA repair protein RAD16; Rad16p [Cryptococcus gattii WM276] gi|317458568|gb|ADV20313.1| DNA repair protein RAD16; Rad16p [Cryptococcus gattii WM276] Length = 1202 Score = 101 bits (251), Expect = 8e-20, Method: Composition-based stats. Identities = 34/167 (20%), Positives = 67/167 (40%), Gaps = 22/167 (13%) Query: 46 KHWKEVHDEKIKA----LEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTL------- 94 V K++A LE + ++ A +V F S L ++ + Sbjct: 1013 GKVDLVTSTKLRAMLRQLEEMRQQDPKAKALVFSQFTSFLDLIETTLTKQGIRWLRFDGT 1072 Query: 95 ---DKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIE 149 + TI+E+ +L + G GLNL N + WW+ QQ I+ Sbjct: 1073 MSQAQRASTIEEFGRKTNEPLILLISLKAGGVGLNLTM-ANYVFLMDTWWNEAIEQQAID 1131 Query: 150 RIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 R+ + G + V+V I + T+++ +++ R+K+ + + L+ Sbjct: 1132 RV-----HRLGQNKPVYVTRYIIKGTVEKRIMKIQRSKTALVNASLS 1173 >gi|294897357|ref|XP_002775945.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983] gi|239882312|gb|EER07761.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983] Length = 1009 Score = 101 bits (251), Expect = 8e-20, Method: Composition-based stats. Identities = 33/166 (19%), Positives = 62/166 (37%), Gaps = 19/166 (11%) Query: 44 EEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQK----------AFPQG 91 + + E K+ L I++K +++ L L++ Sbjct: 585 DGGYGSEQRSGKLSVLLKILDKWVPQGHRVLIFSQTLGMLDILERKVDEKGWTCSRMDGS 644 Query: 92 RTLDKDPCTIQEWNEGKIP-LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 + + ++N + P L+ G GLNL G + +V F W+ Q ER Sbjct: 645 TPVKDRAHIVDDFNSPEGPQLMLLSTRVGGVGLNLT-GADRIVIFDPDWNPMTDAQARER 703 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + G K V +Y LIA T++E + ++ K + +L+ Sbjct: 704 AW-----RIGQKNEVLIYRLIAMGTVEESMYKKQIFKHYLSQKILS 744 >gi|302680218|ref|XP_003029791.1| hypothetical protein SCHCODRAFT_58508 [Schizophyllum commune H4-8] gi|300103481|gb|EFI94888.1| hypothetical protein SCHCODRAFT_58508 [Schizophyllum commune H4-8] Length = 835 Score = 101 bits (251), Expect = 8e-20, Method: Composition-based stats. Identities = 31/156 (19%), Positives = 62/156 (39%), Gaps = 19/156 (12%) Query: 52 HDEKIKALEVIIEK--ANAAPIIVAYHFNSDLA---------RLQKAFPQGRT-LDKDPC 99 KI+ L ++E +++ F L + G T +D+ Sbjct: 503 DSGKIQTLLRLLEGYIGEKRKVLIFSQFTQVLDILVRVLQLKEITYRILTGSTPVDERQV 562 Query: 100 TIQEWNEG-KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQ 158 + E+NE + + + G G+NL ++++ F ++ +R R + Sbjct: 563 LVDEFNENEDLSVFLLSTKAGGMGINLT-AASVVILFDQDFNPH-----NDRQAQDRAYR 616 Query: 159 AGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 G R V V LI + TI+E +L+ +TK + + + Sbjct: 617 IGQTRDVDVVKLITRGTIEEDMLRLAQTKLALDEAV 652 >gi|242208815|ref|XP_002470257.1| predicted protein [Postia placenta Mad-698-R] gi|220730707|gb|EED84560.1| predicted protein [Postia placenta Mad-698-R] Length = 813 Score = 101 bits (251), Expect = 8e-20, Method: Composition-based stats. Identities = 36/181 (19%), Positives = 72/181 (39%), Gaps = 21/181 (11%) Query: 27 SKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARL 84 T LQL Y + + + K+K L ++E+ A +++ F L L Sbjct: 610 VMTDAELQLFCATKYLQPDDCYLQA--GKVKVLLQLLERYHAEGRRVLIFSQFTQILDIL 667 Query: 85 QKAFPQ----------GRTLDKDPCTIQEWNEGK-IPLLFAHPASCGHGLNLQYGGNILV 133 QK + +D + E+ + + I + + G G+NL ++++ Sbjct: 668 QKVLEKEGIRFSLLTGATPVDARQSLVDEFTDDESISVFLLSTKAGGMGINLT-AASVVI 726 Query: 134 FFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDL 193 F ++ +Q R + G K+ V V LI + +I+E +L +TK + + Sbjct: 727 MFDQDFNPHNDKQA-----QDRAYRIGQKQDVDVVKLITKGSIEEDMLALGQTKLALDEA 781 Query: 194 L 194 + Sbjct: 782 V 782 >gi|145353728|ref|XP_001421157.1| predicted protein [Ostreococcus lucimarinus CCE9901] gi|144581393|gb|ABO99450.1| predicted protein [Ostreococcus lucimarinus CCE9901] Length = 1086 Score = 101 bits (251), Expect = 8e-20, Method: Composition-based stats. Identities = 25/155 (16%), Positives = 56/155 (36%), Gaps = 19/155 (12%) Query: 56 IKALEVIIEKANAA--PIIVAYHFNSDLARLQKAFPQGR----------TLDKDPCTIQE 103 + AL + + N IV + + + ++ + + + + +Q Sbjct: 919 VNALRDMRNQENGHLNKAIVFSQYTAMIEIVEWRLKKAKFTIAKLLGSMPVTQRAANLQA 978 Query: 104 W-NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFK 162 + + + ++ S G GLNLQ N + WW+ Q + R + G Sbjct: 979 FREDPNVSVILMSLKSGGEGLNLQ-AANYVYVLEPWWNPAVEMQAV-----MRAHRIGQL 1032 Query: 163 RAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 R V + TI+E +++ K + + ++ Sbjct: 1033 RPVTAVRFSTKGTIEERMMELQEKKQLVFEGCMDG 1067 >gi|324505729|gb|ADY42457.1| DNA repair and recombination protein RAD54B [Ascaris suum] Length = 746 Score = 101 bits (251), Expect = 8e-20, Method: Composition-based stats. Identities = 35/154 (22%), Positives = 56/154 (36%), Gaps = 20/154 (12%) Query: 51 VHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQK----------AFPQGRTLDKDP 98 V K+ ++ ++V +F L L + + Sbjct: 539 VDSGKLSVFVKMMVSLRETNEKVVVVSNFTKTLDMLSEVCKGIFCTVTRLDGSVVPHRRM 598 Query: 99 CTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 + E+N +P + + G GLNL G + LV F W+ Q + RI Sbjct: 599 QLVDEFNTSSLPNHVFLLSTKAGGVGLNL-IGASRLVLFDSDWNPAFDVQAMARIW---- 653 Query: 157 RQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 + G K +Y L+ TIDE +LQR KS + Sbjct: 654 -RDGQKMPCHIYRLVTAGTIDEKILQRQVMKSGL 686 >gi|309360381|emb|CAP31417.2| CBR-RAD-54 protein [Caenorhabditis briggsae AF16] Length = 1079 Score = 101 bits (251), Expect = 9e-20, Method: Composition-based stats. Identities = 31/127 (24%), Positives = 53/127 (41%), Gaps = 12/127 (9%) Query: 80 DLARLQKAFPQGRTLDKDPCTIQEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSL 137 D RL + + + + +N+ I + G GLNL G N LV F Sbjct: 852 DFVRLDGSMS----IKQRSKIVDTFNDPASTIFCFLLSSKAGGCGLNL-IGANRLVMFDP 906 Query: 138 WWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 W+ Q + R+ + G K+ F+Y L+A +I+E + QR K + +++A Sbjct: 907 DWNPANDDQAMARVW-----RDGQKKTCFIYRLLATGSIEEKMFQRQTHKKALSSCVVDA 961 Query: 198 LKKETIH 204 + H Sbjct: 962 GEDVARH 968 >gi|302684803|ref|XP_003032082.1| hypothetical protein SCHCODRAFT_67837 [Schizophyllum commune H4-8] gi|300105775|gb|EFI97179.1| hypothetical protein SCHCODRAFT_67837 [Schizophyllum commune H4-8] Length = 811 Score = 101 bits (251), Expect = 9e-20, Method: Composition-based stats. Identities = 29/162 (17%), Positives = 64/162 (39%), Gaps = 24/162 (14%) Query: 52 HDEKIKALEVIIEKANAAP--IIVAYHFNSDLARLQK----------AFPQGRT--LDKD 97 K+ LE ++++ +++ F L ++ G+T L++ Sbjct: 547 ASGKMMVLERLLDELFRRKHKVLLFSQFTKMLDIIEDWAIEFKGWNLCRIDGQTPPLERR 606 Query: 98 PCTIQEWNEGKIP----LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGV 153 + G P L + G G+NL + ++F+ W+ + Q Sbjct: 607 AEMDRFQTGGDAPDAPCLFLLSTRAGGLGINLT-AADTVIFYDQDWNPQMDAQA-----Q 660 Query: 154 TRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 R + G R V ++ L++ +TI+ ++QR K ++ L++ Sbjct: 661 DRAHRIGQTRPVLIFRLVSAHTIETKIMQRATEKRKLEALVI 702 >gi|268566403|ref|XP_002639713.1| C. briggsae CBR-RAD-54 protein [Caenorhabditis briggsae] Length = 782 Score = 101 bits (251), Expect = 9e-20, Method: Composition-based stats. Identities = 31/127 (24%), Positives = 53/127 (41%), Gaps = 12/127 (9%) Query: 80 DLARLQKAFPQGRTLDKDPCTIQEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSL 137 D RL + + + + +N+ I + G GLNL G N LV F Sbjct: 555 DFVRLDGSMS----IKQRSKIVDTFNDPASTIFCFLLSSKAGGCGLNL-IGANRLVMFDP 609 Query: 138 WWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 W+ Q + R+ + G K+ F+Y L+A +I+E + QR K + +++A Sbjct: 610 DWNPANDDQAMARVW-----RDGQKKTCFIYRLLATGSIEEKMFQRQTHKKALSSCVVDA 664 Query: 198 LKKETIH 204 + H Sbjct: 665 GEDVARH 671 >gi|302811536|ref|XP_002987457.1| hypothetical protein SELMODRAFT_158748 [Selaginella moellendorffii] gi|300144863|gb|EFJ11544.1| hypothetical protein SELMODRAFT_158748 [Selaginella moellendorffii] Length = 1292 Score = 101 bits (251), Expect = 9e-20, Method: Composition-based stats. Identities = 34/175 (19%), Positives = 66/175 (37%), Gaps = 20/175 (11%) Query: 43 DEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQ---------KAFPQG 91 D + K+ L+ + K A +++ F L L+ G Sbjct: 576 DAVQKTLVEASGKLLLLDKMTTKLKAEGHRVLIYSQFQRVLDILEDWLAYKNWNYERIDG 635 Query: 92 RTLDKDPCT-IQEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMI 148 + D + I +N KI + G G+NL + +V + W+ Q + Sbjct: 636 KVSGADRQSRIDRFNAPGSKIFCFLLSTRAGGLGINL-ATADTVVIYDSDWNPHADMQAM 694 Query: 149 ERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETI 203 R + G V +Y LI + TI+E ++Q + K ++ L++ +K + + Sbjct: 695 AR-----AHRMGQTSKVMIYRLITRGTIEERMMQLSKKKMVLEHLVVGRMKTQIL 744 >gi|218194432|gb|EEC76859.1| hypothetical protein OsI_15041 [Oryza sativa Indica Group] Length = 1138 Score = 100 bits (250), Expect = 9e-20, Method: Composition-based stats. Identities = 45/189 (23%), Positives = 67/189 (35%), Gaps = 27/189 (14%) Query: 13 CDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAA--P 70 C L I + +C D E +WK K+ L I+E Sbjct: 939 CPLCRSPITKSELITLPSQCR------FQVDPENNWK--DSCKVIKLIKILEGLQEKREK 990 Query: 71 IIVAYHFNSDLARLQKAFPQGRTL----------DKDPCTIQEWNEGKIP-LLFAHPASC 119 IV F S L+ F Q ++E++E K +L + Sbjct: 991 SIVFSQFTSFFDLLEVPFNQKGIKFLRFDGKLSQKHREKVLKEFSESKDKLVLLMSLKAG 1050 Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 G GLNL N + WW+ +Q I RI + G KRAV V I ++T++E Sbjct: 1051 GVGLNLTAASN-VFLMDPWWNPAVEEQAIMRI-----HRIGQKRAVQVRRFIVKDTVEER 1104 Query: 180 VLQRLRTKS 188 + + K Sbjct: 1105 MQKVQACKQ 1113 >gi|241602475|ref|XP_002405194.1| DNA repair and recombination protein RAD54B, putative [Ixodes scapularis] gi|215500578|gb|EEC10072.1| DNA repair and recombination protein RAD54B, putative [Ixodes scapularis] Length = 680 Score = 100 bits (250), Expect = 9e-20, Method: Composition-based stats. Identities = 34/163 (20%), Positives = 63/163 (38%), Gaps = 22/163 (13%) Query: 50 EVHDEKIKALEVII----EKANAAPIIVAYHFNSDLARLQKA---------FPQGRTLDK 96 E K+K L ++ + + I+V +F L +Q+ G T Sbjct: 428 EASSGKLKVLAAMLASLWDSSPREKIVVVSNFTRMLNVVQELCACKGYTFVRLDGSTSST 487 Query: 97 DP-CTIQEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGV 153 ++ +N + + G GLNL G + +V + + W+ Q + R+ Sbjct: 488 QRLEIVERFNSAHSDCFVFLLSCKAGGVGLNL-IGASRIVLYDVDWNPANDLQAMARVW- 545 Query: 154 TRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + G R V+VY L+ T++E + QR K + +L Sbjct: 546 ----RDGQGRHVYVYRLVTTGTVEEKIYQRQVMKLDLSRTVLE 584 >gi|58531994|emb|CAE04094.3| OSJNBa0096F01.3 [Oryza sativa Japonica Group] Length = 1132 Score = 100 bits (250), Expect = 9e-20, Method: Composition-based stats. Identities = 45/189 (23%), Positives = 67/189 (35%), Gaps = 27/189 (14%) Query: 13 CDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAA--P 70 C L I + +C D E +WK K+ L I+E Sbjct: 933 CPLCRSPITKSELITLPSQCR------FQVDPENNWK--DSCKVIKLIKILEGLQEKREK 984 Query: 71 IIVAYHFNSDLARLQKAFPQGRTL----------DKDPCTIQEWNEGKIP-LLFAHPASC 119 IV F S L+ F Q ++E++E K +L + Sbjct: 985 SIVFSQFTSFFDLLEVPFNQKGIKFLRFDGKLSQKHREKVLKEFSESKDKLVLLMSLKAG 1044 Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 G GLNL N + WW+ +Q I RI + G KRAV V I ++T++E Sbjct: 1045 GVGLNLTAASN-VFLMDPWWNPAVEEQAIMRI-----HRIGQKRAVQVRRFIVKDTVEER 1098 Query: 180 VLQRLRTKS 188 + + K Sbjct: 1099 MQKVQACKQ 1107 >gi|5733122|gb|AAD49435.1| lodestar protein [Homo sapiens] Length = 1162 Score = 100 bits (250), Expect = 9e-20, Method: Composition-based stats. Identities = 31/156 (19%), Positives = 63/156 (40%), Gaps = 17/156 (10%) Query: 53 DEKIKALEVIIEKANAAPIIVAYHFNSDLA----RLQKAFPQGRTLDKDPCT------IQ 102 + LE I + + ++ + + L L+K T+D ++ Sbjct: 994 SSLLAELEAIQRNSASQKSVIVSQWTNMLKVVALHLKKHGLTYATIDGSVNPKQRMDLVE 1053 Query: 103 EWNEGKIP-LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGF 161 +N + P ++ + G GLNL GGN L + W+ Q +RI + G Sbjct: 1054 AFNHSRGPQVMLISLLAGGVGLNLT-GGNHLFLLDMHWNPSLEDQACDRI-----YRVGQ 1107 Query: 162 KRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 ++ V ++ + + T++E +LQ K + +L+ Sbjct: 1108 QKDVVIHRFVCEGTVEEKILQLQEKKKDLAKQVLSG 1143 >gi|297683310|ref|XP_002819326.1| PREDICTED: DNA repair and recombination protein RAD54B-like isoform 1 [Pongo abelii] gi|297683312|ref|XP_002819327.1| PREDICTED: DNA repair and recombination protein RAD54B-like isoform 2 [Pongo abelii] Length = 910 Score = 100 bits (250), Expect = 9e-20, Method: Composition-based stats. Identities = 30/166 (18%), Positives = 65/166 (39%), Gaps = 22/166 (13%) Query: 50 EVHDEKIKALEVIIEKANA----APIIVAYHFNSDLARLQK----------AFPQGRTLD 95 E K++ L ++ + +++ ++ L LQ+ + Sbjct: 638 EKESGKLQVLSKLLAVIHELRPTEKVVLVSNYTQTLNILQEVCKRHGYAYTRLDGQTPIS 697 Query: 96 KDPCTIQEWNE--GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGV 153 + + +N + + + G GLNL GG+ L+ + + W+ Q + R+ Sbjct: 698 QRQQIVDGFNSQHSSVFIFLLSSKAGGVGLNL-IGGSHLILYDIDWNPATDIQAMSRVW- 755 Query: 154 TRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 + G K V +Y L+ TI+E + QR +K + +++ K Sbjct: 756 ----RDGQKYPVHIYRLLTTGTIEEKIYQRQISKQGLCGAVVDLTK 797 >gi|145527844|ref|XP_001449722.1| hypothetical protein [Paramecium tetraurelia strain d4-2] gi|124417310|emb|CAK82325.1| unnamed protein product [Paramecium tetraurelia] Length = 1127 Score = 100 bits (250), Expect = 9e-20, Method: Composition-based stats. Identities = 27/159 (16%), Positives = 60/159 (37%), Gaps = 19/159 (11%) Query: 52 HDEKIKALEVIIEKANAA--PIIVAYHFNSDLARLQKAFP-----------QGRTLDKDP 98 K+ L+ +++ +++ L L++ Q + D+ Sbjct: 884 SSSKLLQLDRLLKDLKQKQWRVLIFCQMTRMLDILEEYMLHKGYTYFRMDGQCQINDRRD 943 Query: 99 CTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQ 158 + KI + G G+ L + ++F+ W+ Q +R + Sbjct: 944 MVNEFQQNDKIFAFLLSTRAGGLGITLTQ-ADAVIFYDNDWNPTMDAQATDR-----AHR 997 Query: 159 AGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 G + V+VY LI + TI+E +++R + K +Q + + Sbjct: 998 IGRTKDVYVYRLITKGTIEERIVKRAQQKQNVQSTVYSG 1036 >gi|109086956|ref|XP_001088870.1| PREDICTED: DNA repair and recombination protein RAD54B isoform 2 [Macaca mulatta] Length = 908 Score = 100 bits (250), Expect = 9e-20, Method: Composition-based stats. Identities = 30/166 (18%), Positives = 65/166 (39%), Gaps = 22/166 (13%) Query: 50 EVHDEKIKALEVIIEKANA----APIIVAYHFNSDLARLQK----------AFPQGRTLD 95 E K++ L ++ + +++ ++ L LQ+ + Sbjct: 637 EKESGKLQVLSKLLAVIHELRPTEKVVLVSNYTQTLNILQEVCKRHGYAYTRLDGQTPIS 696 Query: 96 KDPCTIQEWNE--GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGV 153 + + +N + + + G GLNL GG+ L+ + + W+ Q + R+ Sbjct: 697 QRQQIVDGFNSQHSSVFIFLLSSKAGGVGLNL-IGGSHLILYDIDWNPATDIQAMSRVW- 754 Query: 154 TRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 + G K V +Y L+ TI+E + QR +K + +++ K Sbjct: 755 ----RDGQKYPVHIYRLLTTGTIEEKIYQRQISKQGLCGAVVDLTK 796 >gi|195333840|ref|XP_002033594.1| GM21414 [Drosophila sechellia] gi|194125564|gb|EDW47607.1| GM21414 [Drosophila sechellia] Length = 1027 Score = 100 bits (250), Expect = 9e-20, Method: Composition-based stats. Identities = 43/225 (19%), Positives = 89/225 (39%), Gaps = 37/225 (16%) Query: 6 KFQRELYCDLQGENIEAFNSASKTVK------CLQL---ANGAVYYD--------EEKHW 48 K QR+ Y + ++I+ N A K K +QL N +D Sbjct: 366 KMQRDWYTKVLLKDIDVVNGAGKVEKMRLQNILMQLRKCTNHPYLFDGAEPGPPYTTDTH 425 Query: 49 KEVHDEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQ---------KAFPQGRTLDKD 97 + K+ L+ ++ K + +++ L L+ G+T +D Sbjct: 426 LVYNSGKMAILDKLLPKLQEQGSRVLIFSQMTRMLDILEDYCHWRNYNYCRLDGQTPHED 485 Query: 98 P-CTIQEWN--EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 IQE+N L + G G+NL ++++ + W+ + Q ++R Sbjct: 486 RNRQIQEFNMDNSAKFLFMLSTRAGGLGINL-ATADVVIIYDSDWNPQMDLQAMDR---- 540 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 + G K+ V V+ LI ++T++E +++R K + +++ + Sbjct: 541 -AHRIGQKKQVRVFRLITESTVEEKIVERAEVKLRLDKMVIQGGR 584 >gi|194883574|ref|XP_001975876.1| GG20326 [Drosophila erecta] gi|190659063|gb|EDV56276.1| GG20326 [Drosophila erecta] Length = 1027 Score = 100 bits (250), Expect = 9e-20, Method: Composition-based stats. Identities = 43/225 (19%), Positives = 89/225 (39%), Gaps = 37/225 (16%) Query: 6 KFQRELYCDLQGENIEAFNSASKTVK------CLQL---ANGAVYYD--------EEKHW 48 K QR+ Y + ++I+ N A K K +QL N +D Sbjct: 366 KMQRDWYTKVLLKDIDVVNGAGKVEKMRLQNILMQLRKCTNHPYLFDGAEPGPPYTTDTH 425 Query: 49 KEVHDEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQ---------KAFPQGRTLDKD 97 + K+ L+ ++ K + +++ L L+ G+T +D Sbjct: 426 LVYNSGKMAILDKLLPKLQEQGSRVLIFSQMTRMLDILEDYCHWRNYNYCRLDGQTPHED 485 Query: 98 P-CTIQEWN--EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 IQE+N L + G G+NL ++++ + W+ + Q ++R Sbjct: 486 RNRQIQEFNMDNSTKFLFMLSTRAGGLGINL-ATADVVIIYDSDWNPQMDLQAMDR---- 540 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 + G K+ V V+ LI ++T++E +++R K + +++ + Sbjct: 541 -AHRIGQKKQVRVFRLITESTVEEKIVERAEVKLRLDKMVIQGGR 584 >gi|66356890|ref|XP_625623.1| Swi2/Snf2 ATpase,Rad16 ortholog [Cryptosporidium parvum Iowa II] gi|46226722|gb|EAK87701.1| Swi2/Snf2 ATpase,Rad16 ortholog [Cryptosporidium parvum Iowa II] Length = 1278 Score = 100 bits (250), Expect = 9e-20, Method: Composition-based stats. Identities = 32/161 (19%), Positives = 56/161 (34%), Gaps = 21/161 (13%) Query: 52 HDEKIKAL-EVIIEKANAAPI---IVAYHFNSDLARLQKAFPQGRT----------LDKD 97 KI L E + + P IV F + L + + + + Sbjct: 1105 SSTKIDTLLEEVNKMMQEDPESKGIVFSQFTNMLDLVSYRLKKANIGCVMLAGSMSILQR 1164 Query: 98 PCTIQEWNE-GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 + +N+ + ++ + G GLNLQ N + WW+ Q R Sbjct: 1165 NSILYSFNKFPDLKIILISLKAGGEGLNLQV-ANYVFLLDPWWNPAVELQA-----FQRA 1218 Query: 157 RQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + G K+ V I ++TI+E + Q K + D + A Sbjct: 1219 HRIGQKKKVTALRFITKDTIEERMFQLQEKKQLVFDGTVGA 1259 >gi|256268827|gb|EEU04181.1| Irc5p [Saccharomyces cerevisiae JAY291] Length = 853 Score = 100 bits (250), Expect = 9e-20, Method: Composition-based stats. Identities = 30/162 (18%), Positives = 66/162 (40%), Gaps = 20/162 (12%) Query: 52 HDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQK---------AFPQGRTLDKDPCT 100 K++ L+ +I + +++ F + L ++ G ++ Sbjct: 601 TSGKLQILQKLIPPLISEGHKVLIYSQFVNMLDLIEDWCDLNSFATFRIDGSVNNETRKD 660 Query: 101 -IQEWNE--GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 ++++N K + + G G+NL G + +V F W+ + Q ++R Sbjct: 661 QLEKFNSSKDKHNIFLLSTRAAGLGINL-VGADTVVLFDSDWNPQVDLQAMDRC-----H 714 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 + G + V VY L NTI+ ++L R K ++ +++ K Sbjct: 715 RIGQESPVIVYRLCCDNTIEHVILTRAANKRNLERMVIQMGK 756 >gi|209945934|gb|ACI97198.1| okra [Drosophila simulans] gi|209945936|gb|ACI97199.1| okra [Drosophila simulans] gi|209945938|gb|ACI97200.1| okra [Drosophila melanogaster] gi|209945940|gb|ACI97201.1| okra [Drosophila simulans] gi|209945944|gb|ACI97203.1| okra [Drosophila melanogaster] gi|209945946|gb|ACI97204.1| okra [Drosophila melanogaster] gi|209945948|gb|ACI97205.1| okra [Drosophila melanogaster] gi|209945950|gb|ACI97206.1| okra [Drosophila melanogaster] gi|209945952|gb|ACI97207.1| okra [Drosophila melanogaster] gi|209945954|gb|ACI97208.1| okra [Drosophila melanogaster] gi|209945956|gb|ACI97209.1| okra [Drosophila melanogaster] gi|209945958|gb|ACI97210.1| okra [Drosophila melanogaster] gi|209945962|gb|ACI97212.1| okra [Drosophila melanogaster] gi|209945964|gb|ACI97213.1| okra [Drosophila melanogaster] gi|209945966|gb|ACI97214.1| okra [Drosophila melanogaster] gi|209945968|gb|ACI97215.1| okra [Drosophila melanogaster] gi|209945970|gb|ACI97216.1| okra [Drosophila melanogaster] gi|209945972|gb|ACI97217.1| okra [Drosophila melanogaster] gi|209945974|gb|ACI97218.1| okra [Drosophila melanogaster] gi|209945976|gb|ACI97219.1| okra [Drosophila melanogaster] gi|209945978|gb|ACI97220.1| okra [Drosophila melanogaster] gi|209945980|gb|ACI97221.1| okra [Drosophila melanogaster] gi|209945982|gb|ACI97222.1| okra [Drosophila melanogaster] gi|209945984|gb|ACI97223.1| okra [Drosophila melanogaster] gi|209945986|gb|ACI97224.1| okra [Drosophila melanogaster] gi|209945990|gb|ACI97226.1| okra [Drosophila melanogaster] gi|209945992|gb|ACI97227.1| okra [Drosophila melanogaster] gi|209945996|gb|ACI97229.1| okra [Drosophila melanogaster] gi|209945998|gb|ACI97230.1| okra [Drosophila melanogaster] gi|209946000|gb|ACI97231.1| okra [Drosophila melanogaster] gi|209946002|gb|ACI97232.1| okra [Drosophila melanogaster] Length = 168 Score = 100 bits (250), Expect = 9e-20, Method: Composition-based stats. Identities = 30/143 (20%), Positives = 59/143 (41%), Gaps = 19/143 (13%) Query: 58 ALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGR----------TLDKDPCTIQEWNEG 107 L I + N +++ ++ L ++ + + ++ K + +N+ Sbjct: 33 MLAAIRAEGNDKVVLI-SNYTQTLDLFEQLARKRKYGFVRLDGTMSIKKRSKVVDRFNDP 91 Query: 108 KIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 + L + G GLNL G N L F W+ +Q + R+ + G K+ Sbjct: 92 ESDSFLFMLSSKAGGCGLNL-IGANRLFMFDPDWNPANDEQAMARVW-----RDGQKKPC 145 Query: 166 FVYYLIAQNTIDELVLQRLRTKS 188 ++Y L+A +I+E +LQR K Sbjct: 146 YIYRLVASGSIEEKILQRQTHKK 168 >gi|168023352|ref|XP_001764202.1| transcription-coupled repair protein CSB/RAD26 [Physcomitrella patens subsp. patens] gi|162684642|gb|EDQ71043.1| transcription-coupled repair protein CSB/RAD26 [Physcomitrella patens subsp. patens] Length = 802 Score = 100 bits (250), Expect = 9e-20, Method: Composition-based stats. Identities = 36/156 (23%), Positives = 60/156 (38%), Gaps = 19/156 (12%) Query: 53 DEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQ----------KAFPQGRTLDKDPCT 100 K+K L ++E K +++ L ++ + + + Sbjct: 323 SGKLKVLAQVLELWKTQGHRVLLFTQTQQMLDIVENYVTSKGYVYRRMDGNTPVKQRMQL 382 Query: 101 IQEWNEGK-IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQA 159 I E+NEG + + G G NL G N +V F W+ Q ER + Sbjct: 383 IDEFNEGDHVFIFILTTKVGGLGTNL-IGANRVVIFDPDWNPSTDMQARERAW-----RI 436 Query: 160 GFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 G K+ V +Y LI + TI+E V R K + + +L Sbjct: 437 GQKKEVVIYRLITRGTIEEKVYHRQIYKHFLTNKIL 472 >gi|209945988|gb|ACI97225.1| okra [Drosophila melanogaster] Length = 168 Score = 100 bits (250), Expect = 9e-20, Method: Composition-based stats. Identities = 30/143 (20%), Positives = 59/143 (41%), Gaps = 19/143 (13%) Query: 58 ALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGR----------TLDKDPCTIQEWNEG 107 L I + N +++ ++ L ++ + + ++ K + +N+ Sbjct: 33 MLAAIRAEGNDKVVLI-SNYTQTLDLFEQLARKRKYGFVRLDGTMSIKKRSKVVDRFNDP 91 Query: 108 KIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 + L + G GLNL G N L F W+ +Q + R+ + G K+ Sbjct: 92 ESDSFLFMLSSKAGGCGLNL-IGANRLFMFDPDWNPANDEQAMARVW-----RDGQKKPC 145 Query: 166 FVYYLIAQNTIDELVLQRLRTKS 188 ++Y L+A +I+E +LQR K Sbjct: 146 YIYRLVASGSIEEKILQRQTHKK 168 >gi|109014585|ref|XP_001112974.1| PREDICTED: transcription termination factor 2-like isoform 1 [Macaca mulatta] Length = 1170 Score = 100 bits (250), Expect = 9e-20, Method: Composition-based stats. Identities = 31/156 (19%), Positives = 63/156 (40%), Gaps = 17/156 (10%) Query: 53 DEKIKALEVIIEKANAAPIIVAYHFNSDLA----RLQKAFPQGRTLDKDPCT------IQ 102 + LE I + + ++ + + L L+K T+D ++ Sbjct: 1002 SSLLAELEAIQRNSASQKSVIVSQWTNMLKVVALHLKKHGLTYATIDGSVNPKQRMDLVE 1061 Query: 103 EWNEGKIP-LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGF 161 +N + P ++ + G GLNL GGN L + W+ Q +RI + G Sbjct: 1062 AFNHSRGPQVMLISLLAGGVGLNLT-GGNHLFLLDMHWNPSLEDQACDRI-----YRVGQ 1115 Query: 162 KRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 ++ V ++ + + T++E +LQ K + +L+ Sbjct: 1116 QKDVVIHRFVCEGTVEEKILQLQEKKKDLAKQVLSG 1151 >gi|109014588|ref|XP_001112999.1| PREDICTED: transcription termination factor 2-like isoform 2 [Macaca mulatta] Length = 1163 Score = 100 bits (250), Expect = 9e-20, Method: Composition-based stats. Identities = 31/156 (19%), Positives = 63/156 (40%), Gaps = 17/156 (10%) Query: 53 DEKIKALEVIIEKANAAPIIVAYHFNSDLA----RLQKAFPQGRTLDKDPCT------IQ 102 + LE I + + ++ + + L L+K T+D ++ Sbjct: 995 SSLLAELEAIQRNSASQKSVIVSQWTNMLKVVALHLKKHGLTYATIDGSVNPKQRMDLVE 1054 Query: 103 EWNEGKIP-LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGF 161 +N + P ++ + G GLNL GGN L + W+ Q +RI + G Sbjct: 1055 AFNHSRGPQVMLISLLAGGVGLNLT-GGNHLFLLDMHWNPSLEDQACDRI-----YRVGQ 1108 Query: 162 KRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 ++ V ++ + + T++E +LQ K + +L+ Sbjct: 1109 QKDVVIHRFVCEGTVEEKILQLQEKKKDLAKQVLSG 1144 >gi|3702846|gb|AAC64044.1| RNA polymerase II termination factor [Homo sapiens] Length = 1162 Score = 100 bits (250), Expect = 9e-20, Method: Composition-based stats. Identities = 31/156 (19%), Positives = 63/156 (40%), Gaps = 17/156 (10%) Query: 53 DEKIKALEVIIEKANAAPIIVAYHFNSDLA----RLQKAFPQGRTLDKDPCT------IQ 102 + LE I + + ++ + + L L+K T+D ++ Sbjct: 994 SSLLAELEAIQRNSASQKSVIVSQWTNMLKVVALHLKKHGLTYATIDGSVNPKQRMDLVE 1053 Query: 103 EWNEGKIP-LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGF 161 +N + P ++ + G GLNL GGN L + W+ Q +RI + G Sbjct: 1054 AFNHSRGPQVMLISLLAGGVGLNLT-GGNHLFLLDMHWNPSLEDQACDRI-----YRVGQ 1107 Query: 162 KRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 ++ V ++ + + T++E +LQ K + +L+ Sbjct: 1108 QKDVVIHRFVCEGTVEEKILQLQEKKKDLAKQVLSG 1143 >gi|300122623|emb|CBK23191.2| unnamed protein product [Blastocystis hominis] Length = 1548 Score = 100 bits (250), Expect = 9e-20, Method: Composition-based stats. Identities = 31/148 (20%), Positives = 59/148 (39%), Gaps = 18/148 (12%) Query: 65 KANAAPIIVAYHFNSDLARLQK---------AFPQGRTLDKDPCT-IQEW--NEGKIPLL 112 ++ +++ F L L++ A G+T D T I + + + Sbjct: 1071 QSEGHRVLIFSQFVKMLDILEEYCQLRAFKVARIDGQTKGNDRQTAIDAFSREDSDCFIF 1130 Query: 113 FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIA 172 + G G+NL + +V + W+ + Q R + G K+ V VY L+ Sbjct: 1131 LLSTRAGGLGINLT-AADTVVIYDSDWNPQNDSQATARC-----HRIGQKQEVSVYRLLT 1184 Query: 173 QNTIDELVLQRLRTKSTIQDLLLNALKK 200 QNT + + +R K I+ ++L+ K Sbjct: 1185 QNTYEYEMFERASRKLAIESVVLDREKP 1212 >gi|221055808|ref|XP_002259042.1| snf2 family n-terminal domain [Plasmodium knowlesi strain H] gi|193809113|emb|CAQ39815.1| snf2 family n-terminal domain, putative [Plasmodium knowlesi strain H] Length = 1382 Score = 100 bits (250), Expect = 1e-19, Method: Composition-based stats. Identities = 44/221 (19%), Positives = 90/221 (40%), Gaps = 37/221 (16%) Query: 6 KFQRELYCDLQGENIEAFNSAS-----KTVKCLQL---ANGAVYYD--------EEKHWK 49 K Q++LY D+ +NI+ N+ + +QL N +D E H Sbjct: 543 KLQKKLYSDILSKNIDVINAMTGSKNQMLNILMQLRKCCNHPYLFDGIEEPPYIEGNHLI 602 Query: 50 EVHDEKIKALEVIIEKANA--APIIVAYHFNSDLARL---------QKAFPQGRTLDKDP 98 E K+ L+ ++ + + +++ L + + G T+ + Sbjct: 603 E-TSGKMSLLDKLLPRLKKENSRVLLFSQMTRVLDIIDDYCRWKKYEYLRIDGSTVGDER 661 Query: 99 CT-IQEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTR 155 I ++NE K + + G G+NL +I++ F ++ + Q ++R Sbjct: 662 QIRINQFNEPNSKYFIFLLSTRAGGIGINLTT-ADIVILFDSDYNPQMDIQAMDR----- 715 Query: 156 QRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + G K+ V VY + QNT++E +++R K + L++ Sbjct: 716 AHRIGQKKKVIVYRFVTQNTVEEKIVERAAKKLKLDSLIIQ 756 >gi|158255470|dbj|BAF83706.1| unnamed protein product [Homo sapiens] Length = 1162 Score = 100 bits (250), Expect = 1e-19, Method: Composition-based stats. Identities = 31/156 (19%), Positives = 63/156 (40%), Gaps = 17/156 (10%) Query: 53 DEKIKALEVIIEKANAAPIIVAYHFNSDLA----RLQKAFPQGRTLDKDPCT------IQ 102 + LE I + + ++ + + L L+K T+D ++ Sbjct: 994 SSLLAELEAIQRNSASQKSVIVSQWTNMLKVVALHLKKHGLTYATIDGSVNPKQRMDLVE 1053 Query: 103 EWNEGKIP-LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGF 161 +N + P ++ + G GLNL GGN L + W+ Q +RI + G Sbjct: 1054 AFNHSRGPQVMLISLLAGGVGLNLT-GGNHLFLLDMHWNPSLEDQACDRI-----YRVGQ 1107 Query: 162 KRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 ++ V ++ + + T++E +LQ K + +L+ Sbjct: 1108 QKDVVIHRFVCEGTVEEKILQLQEKKKDLAKQVLSG 1143 >gi|114558614|ref|XP_513683.2| PREDICTED: transcription termination factor, RNA polymerase II [Pan troglodytes] Length = 1162 Score = 100 bits (250), Expect = 1e-19, Method: Composition-based stats. Identities = 31/156 (19%), Positives = 63/156 (40%), Gaps = 17/156 (10%) Query: 53 DEKIKALEVIIEKANAAPIIVAYHFNSDLA----RLQKAFPQGRTLDKDPCT------IQ 102 + LE I + + ++ + + L L+K T+D ++ Sbjct: 994 SSLLAELEAIQRNSASQKSVIVSQWTNMLKVVALHLKKRGLTYATIDGSVNPKQRMDLVE 1053 Query: 103 EWNEGKIP-LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGF 161 +N + P ++ + G GLNL GGN L + W+ Q +RI + G Sbjct: 1054 AFNHSRGPQVMLISLLAGGVGLNLT-GGNHLFLLDMHWNPSLEDQACDRI-----YRVGQ 1107 Query: 162 KRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 ++ V ++ + + T++E +LQ K + +L+ Sbjct: 1108 QKDVVIHRFVCEGTVEEKILQLQEKKKDLAKQVLSG 1143 >gi|40807471|ref|NP_003585.3| transcription termination factor 2 [Homo sapiens] gi|73920148|sp|Q9UNY4|TTF2_HUMAN RecName: Full=Transcription termination factor 2; AltName: Full=Lodestar homolog; AltName: Full=RNA polymerase II termination factor; AltName: Full=Transcription release factor 2; Short=F2; Short=HuF2 gi|55665021|emb|CAH71961.1| transcription termination factor, RNA polymerase II [Homo sapiens] gi|55959604|emb|CAI12738.1| transcription termination factor, RNA polymerase II [Homo sapiens] gi|119577070|gb|EAW56666.1| transcription termination factor, RNA polymerase II, isoform CRA_a [Homo sapiens] gi|119577071|gb|EAW56667.1| transcription termination factor, RNA polymerase II, isoform CRA_a [Homo sapiens] Length = 1162 Score = 100 bits (250), Expect = 1e-19, Method: Composition-based stats. Identities = 31/156 (19%), Positives = 63/156 (40%), Gaps = 17/156 (10%) Query: 53 DEKIKALEVIIEKANAAPIIVAYHFNSDLA----RLQKAFPQGRTLDKDPCT------IQ 102 + LE I + + ++ + + L L+K T+D ++ Sbjct: 994 SSLLAELEAIQRNSASQKSVIVSQWTNMLKVVALHLKKHGLTYATIDGSVNPKQRMDLVE 1053 Query: 103 EWNEGKIP-LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGF 161 +N + P ++ + G GLNL GGN L + W+ Q +RI + G Sbjct: 1054 AFNHSRGPQVMLISLLAGGVGLNLT-GGNHLFLLDMHWNPSLEDQACDRI-----YRVGQ 1107 Query: 162 KRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 ++ V ++ + + T++E +LQ K + +L+ Sbjct: 1108 QKDVVIHRFVCEGTVEEKILQLQEKKKDLAKQVLSG 1143 >gi|281203153|gb|EFA77354.1| chromo domain-containing protein [Polysphondylium pallidum PN500] Length = 1842 Score = 100 bits (250), Expect = 1e-19, Method: Composition-based stats. Identities = 31/188 (16%), Positives = 71/188 (37%), Gaps = 26/188 (13%) Query: 20 IEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNS 79 ++A K L V E H + + ++ L+++ + + Sbjct: 1015 VKASGKLILLDKLL------VRLKETGHRVLIFSQMVRMLDILADYLKGRGFLF------ 1062 Query: 80 DLARLQKAFPQGRTLDKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSL 137 + + +K + +N P + G G+NL + ++ F Sbjct: 1063 ------QRLDGSTSREKRSQAMDRFNAEGSPDFAFLLSTRAGGLGINLST-ADTVIIFDS 1115 Query: 138 WWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 W+ + Q R + G K V +Y L++++TI+E +L+R + K + L++ + Sbjct: 1116 DWNPQNDLQAEAR-----AHRIGQKNTVNIYRLVSKSTIEEEILERAKQKMVLDHLVIQS 1170 Query: 198 LKKETIHV 205 ++K + Sbjct: 1171 MEKSSTKT 1178 >gi|291388286|ref|XP_002710621.1| PREDICTED: RAD54 homolog B [Oryctolagus cuniculus] Length = 911 Score = 100 bits (250), Expect = 1e-19, Method: Composition-based stats. Identities = 30/166 (18%), Positives = 64/166 (38%), Gaps = 22/166 (13%) Query: 50 EVHDEKIKALEVIIEKANA----APIIVAYHFNSDLARLQK----------AFPQGRTLD 95 E K++ L ++ + +++ ++ L LQ+ + Sbjct: 638 EEESGKLQVLSKLLAVIHELRPTEKVVLVSNYTQTLNILQEVCKRHGYAHTRLDGQTPIS 697 Query: 96 KDPCTIQEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGV 153 + + +N + + G GLNL GG+ L+ + + W+ Q + R+ Sbjct: 698 QRQQIVDGFNSKYSSDFIFLLSSKAGGVGLNL-IGGSHLILYDIDWNPATDIQAMSRVW- 755 Query: 154 TRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 + G K V +Y L+ TI+E + QR +K + +++ K Sbjct: 756 ----RDGQKHPVHIYRLLTTGTIEEKIYQRQISKQGLSGAVVDLSK 797 >gi|170032260|ref|XP_001844000.1| DNA repair and recombination protein RAD54 [Culex quinquefasciatus] gi|167872116|gb|EDS35499.1| DNA repair and recombination protein RAD54 [Culex quinquefasciatus] Length = 821 Score = 100 bits (250), Expect = 1e-19, Method: Composition-based stats. Identities = 34/165 (20%), Positives = 63/165 (38%), Gaps = 20/165 (12%) Query: 46 KHWKEVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQK----------AFPQGRT 93 +H K+ LE ++E +++ +F+ L + Sbjct: 548 QHMGPADSGKLAILESLLEALIERREKVVIVSYFSKTLDMIAGLCEHYNYKFCRLDGATP 607 Query: 94 LDKDPCTIQEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERI 151 + +N I + + G GLNL G + LV F W+ Q + RI Sbjct: 608 SQDRGKLVATFNNPSSDIFIFLLSAKAGGIGLNL-VGASRLVLFDNDWNPASDLQAMSRI 666 Query: 152 GVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + G R VF+Y LI +I+E + QR +K+++ +++ Sbjct: 667 W-----RDGQTRNVFIYRLITAFSIEEKIFQRQISKTSLSGSVVD 706 >gi|67481787|ref|XP_656243.1| SNF2 family protein [Entamoeba histolytica HM-1:IMSS] gi|56473432|gb|EAL50858.1| SNF2 family protein [Entamoeba histolytica HM-1:IMSS] Length = 1527 Score = 100 bits (250), Expect = 1e-19, Method: Composition-based stats. Identities = 35/177 (19%), Positives = 71/177 (40%), Gaps = 26/177 (14%) Query: 39 AVYYDEEKHWKEVHDE-KIKALEVIIEKAN-----AAPIIVAYHFNSDLARLQK------ 86 A E K ++ + K+ AL ++E N +++ N L ++K Sbjct: 1290 AYLKQEGKTIDDITNSPKLMALAELLEMCNIGKDGEHRVLIFAQMNITLELIEKQLFAKQ 1349 Query: 87 -------AFPQGRTLDKDPCTIQEW-NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLW 138 +K + ++ N+ I +L G GLNL +I++F Sbjct: 1350 FPYISYYRLDGSVPQNKRTEIVDKFKNDPTIDVLLLTTRVGGLGLNLT-AADIVIFMEHD 1408 Query: 139 WDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 W+ + Q ++R + G + V VY LI + T++E ++ + K+ I + ++ Sbjct: 1409 WNPTKDLQAMDR-----AHRLGQNKVVNVYRLIVRQTLEERIMNLQQFKTKIANTVV 1460 >gi|326444982|ref|ZP_08219716.1| SNF2/RAD54 family helicase [Streptomyces clavuligerus ATCC 27064] Length = 1408 Score = 100 bits (250), Expect = 1e-19, Method: Composition-based stats. Identities = 35/216 (16%), Positives = 75/216 (34%), Gaps = 49/216 (22%) Query: 1 MKQYHKFQR------ELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDE 54 +K + + Q+ + + +A +A+++ K Sbjct: 1200 LKLFDQLQKICNAPEQFLAEPLDSTYDAERAAARSGKLA--------------------- 1238 Query: 55 KIKALEVIIEKANA--APIIVAYHFNSDLARLQKA----------FPQGRTLDKDPC-TI 101 AL+ ++ + ++ + + RL F + +D I Sbjct: 1239 ---ALDDLLPTLSDPDESCLIFTRYRAMARRLVHHLQGHGISPLYFSGDISAGRDRQRVI 1295 Query: 102 QEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGF 161 + + + G GL L + ++ F W+ + Q I+R + G Sbjct: 1296 DTFQNHPGQTMVITIKAGGTGLTLTQASH-VILFDRPWNPAKESQAIDR-----AHRLGQ 1349 Query: 162 KRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 R V V+ L +NT+++ V + LR KS + D +L + Sbjct: 1350 TRTVTVHQLTTENTLEDRVEELLRHKSALADAVLAS 1385 >gi|213406015|ref|XP_002173779.1| SNF2 family helicase Swr1 [Schizosaccharomyces japonicus yFS275] gi|212001826|gb|EEB07486.1| SNF2 family helicase Swr1 [Schizosaccharomyces japonicus yFS275] Length = 1276 Score = 100 bits (250), Expect = 1e-19, Method: Composition-based stats. Identities = 28/177 (15%), Positives = 71/177 (40%), Gaps = 19/177 (10%) Query: 34 QLANGAVYYDEEKHWKEVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQK----- 86 Q+ ++ + K++ L++++ + +++ L L++ Sbjct: 976 QICTRLAIAFPDRRLLQYDCGKLQKLDLLLREIVPAGHRVLIFTQMTRVLDILEQFLNIH 1035 Query: 87 -----AFPQGRTLDKDPCTIQEWNEGK-IPLLFAHPASCGHGLNLQYGGNILVFFSLWWD 140 +++ + +N+ + IP+ S G G+NL G + ++F+ W+ Sbjct: 1036 GYRYLRLDGATKVEQRQLLTERFNQDERIPVFILSTRSGGLGINLT-GADTVIFYDSDWN 1094 Query: 141 LEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + Q R + G R V +Y LI++ T++ +L+R K + +++ Sbjct: 1095 PQLDAQA-----QDRSHRIGQTRDVHIYRLISEYTVESNMLKRANQKRMLDKIVIQG 1146 >gi|213402301|ref|XP_002171923.1| TATA-binding protein-associated factor MOT1 [Schizosaccharomyces japonicus yFS275] gi|211999970|gb|EEB05630.1| TATA-binding protein-associated factor MOT1 [Schizosaccharomyces japonicus yFS275] Length = 1915 Score = 100 bits (250), Expect = 1e-19, Method: Composition-based stats. Identities = 35/185 (18%), Positives = 64/185 (34%), Gaps = 26/185 (14%) Query: 26 ASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLAR-- 83 A K QL E + + + +++ L Sbjct: 1672 APKLTALRQLLLECNIGTENDSALGANGGTVG------SAVSEHRVLIFCQLKDMLDIVE 1725 Query: 84 ---LQKAFPQGRTL--------DKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNI 131 L+K P L +K + +N + I +L G GLNL G + Sbjct: 1726 NDVLRKTMPSVTYLRLDGSVDPNKRQEVVTRFNSDPSIDVLLLTTHVGGLGLNLT-GADT 1784 Query: 132 LVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQ 191 ++F W+ Q ++R + G K+ V VY LI + T++E ++ + K + Sbjct: 1785 VIFVEHDWNPMRDLQAMDR-----AHRIGQKKVVNVYRLITRGTLEEKIMGLQQFKLNVA 1839 Query: 192 DLLLN 196 ++N Sbjct: 1840 STIVN 1844 >gi|20151803|gb|AAM11261.1| RH13158p [Drosophila melanogaster] Length = 1027 Score = 100 bits (250), Expect = 1e-19, Method: Composition-based stats. Identities = 43/225 (19%), Positives = 89/225 (39%), Gaps = 37/225 (16%) Query: 6 KFQRELYCDLQGENIEAFNSASKTVK------CLQL---ANGAVYYD--------EEKHW 48 K QR+ Y + ++I+ N A K K +QL N +D Sbjct: 366 KMQRDWYTKVLLKDIDVVNGAGKVEKMRLQNILMQLRKCTNHPYLFDGAEPGPPYTTDTH 425 Query: 49 KEVHDEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQ---------KAFPQGRTLDKD 97 + K+ L+ ++ K + +++ L L+ G+T +D Sbjct: 426 LVYNSGKMAILDKLLPKLQEQGSRVLIFSQMTRMLDILEDYCHWRNYNYCRLDGQTPHED 485 Query: 98 P-CTIQEWN--EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 IQE+N L + G G+NL ++++ + W+ + Q ++R Sbjct: 486 RNRQIQEFNMDNSAKFLFMLSTRAGGLGINL-ATADVVIIYDSDWNPQMDLQAMDR---- 540 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 + G K+ V V+ LI ++T++E +++R K + +++ + Sbjct: 541 -AHRIGQKKQVRVFRLITESTVEEKIVERAEVKLRLDKMVIQGGR 584 >gi|17737463|ref|NP_523719.1| imitation SWI, isoform A [Drosophila melanogaster] gi|24653132|ref|NP_725203.1| imitation SWI, isoform B [Drosophila melanogaster] gi|24653134|ref|NP_725204.1| imitation SWI, isoform C [Drosophila melanogaster] gi|6647560|sp|Q24368|ISWI_DROME RecName: Full=Chromatin-remodeling complex ATPase chain Iswi; AltName: Full=CHRAC 140 kDa subunit; AltName: Full=Nucleosome-remodeling factor 140 kDa subunit; Short=NURF-140; AltName: Full=Protein imitation swi gi|439197|gb|AAA19868.1| ISWI protein [Drosophila melanogaster] gi|7303422|gb|AAF58479.1| imitation SWI, isoform A [Drosophila melanogaster] gi|21627326|gb|AAM68637.1| imitation SWI, isoform B [Drosophila melanogaster] gi|21627327|gb|AAM68638.1| imitation SWI, isoform C [Drosophila melanogaster] gi|206597326|gb|ACI15757.1| FI04427p [Drosophila melanogaster] Length = 1027 Score = 100 bits (250), Expect = 1e-19, Method: Composition-based stats. Identities = 43/225 (19%), Positives = 89/225 (39%), Gaps = 37/225 (16%) Query: 6 KFQRELYCDLQGENIEAFNSASKTVK------CLQL---ANGAVYYD--------EEKHW 48 K QR+ Y + ++I+ N A K K +QL N +D Sbjct: 366 KMQRDWYTKVLLKDIDVVNGAGKVEKMRLQNILMQLRKCTNHPYLFDGAEPGPPYTTDTH 425 Query: 49 KEVHDEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQ---------KAFPQGRTLDKD 97 + K+ L+ ++ K + +++ L L+ G+T +D Sbjct: 426 LVYNSGKMAILDKLLPKLQEQGSRVLIFSQMTRMLDILEDYCHWRNYNYCRLDGQTPHED 485 Query: 98 P-CTIQEWN--EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 IQE+N L + G G+NL ++++ + W+ + Q ++R Sbjct: 486 RNRQIQEFNMDNSAKFLFMLSTRAGGLGINL-ATADVVIIYDSDWNPQMDLQAMDR---- 540 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 + G K+ V V+ LI ++T++E +++R K + +++ + Sbjct: 541 -AHRIGQKKQVRVFRLITESTVEEKIVERAEVKLRLDKMVIQGGR 584 >gi|159467693|ref|XP_001692026.1| SWI/SNF chromatin remodeling complex component [Chlamydomonas reinhardtii] gi|158278753|gb|EDP04516.1| SWI/SNF chromatin remodeling complex component [Chlamydomonas reinhardtii] Length = 845 Score = 100 bits (250), Expect = 1e-19, Method: Composition-based stats. Identities = 36/154 (23%), Positives = 60/154 (38%), Gaps = 13/154 (8%) Query: 49 KEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLA---RLQKAFPQGRT-LDKDPCTIQ 102 K K++ L ++ A +V + L RL G T +D + Sbjct: 466 KARTQCKMQVLSELLRGIGAVGERCVVVSTSTAALDLVGRLSTVRIDGATSVDGRQIIVD 525 Query: 103 EWNEGKI-PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGF 161 +N+ + + + G GLNL G N LV + W+ QQ + RI + G Sbjct: 526 NFNKLNMGQVFLLSTRAGGAGLNL-VGANHLVLYDSDWNPAMDQQAMARIW-----RDGQ 579 Query: 162 KRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 + VY ++ TI+E V QR K+ + + Sbjct: 580 TKPCHVYRMLTTGTIEEKVYQRQLMKADLASATM 613 >gi|309365060|emb|CAP23772.2| CBR-BTF-1 protein [Caenorhabditis briggsae AF16] Length = 1653 Score = 100 bits (250), Expect = 1e-19, Method: Composition-based stats. Identities = 39/191 (20%), Positives = 68/191 (35%), Gaps = 26/191 (13%) Query: 23 FNSASKTVKCLQLANGA-VYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDL 81 + + K QL + + ++ DE L + E ++ + + Sbjct: 1397 TSKSGKMEALKQLLIECEICKNPDEEVAAEADE----LGGLNEVGQGHRALIFCQWKTSA 1452 Query: 82 ARLQKAFPQGR--------------TLDKDPCTIQEWNEGK-IPLLFAHPASCGHGLNLQ 126 + +A G + + +NE K I +L G GLNL Sbjct: 1453 QLVSEALRSGEFGSVVSHLVLDGNVPVGDRMKMVNRFNEDKTIEVLILTTHVGGVGLNLT 1512 Query: 127 YGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRT 186 G + ++F W+ + Q I+R + G R V VY LI Q T++E V+ + Sbjct: 1513 -GADTVIFMDHDWNPMKDLQAIDR-----AHRLGQTRNVNVYRLITQGTVEEKVMSLAKF 1566 Query: 187 KSTIQDLLLNA 197 K L+ A Sbjct: 1567 KLNTAQALIGA 1577 >gi|293630862|gb|ACU12857.2| Mot1 [Brachypodium distachyon] Length = 2067 Score = 100 bits (250), Expect = 1e-19, Method: Composition-based stats. Identities = 35/175 (20%), Positives = 67/175 (38%), Gaps = 35/175 (20%) Query: 52 HDEKIKALEVII---------------EKANAAPIIVAYHFNSDLARLQK---------- 86 H K+ AL+ I+ +++ + L ++K Sbjct: 1818 HSPKLVALQEILHECGIGSEISSPDASAAVGQHRVLIFAQHKAFLDIIEKDLFQSHMRSV 1877 Query: 87 ---AFPQGRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLE 142 +K ++ +N + I +L G GLNL + LVF W+ Sbjct: 1878 TYLRLDGSVQTEKRFEIVKSFNSDPTIDVLLLTTHVGGLGLNLT-SADTLVFMEHDWNPM 1936 Query: 143 EHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + Q ++R + G K+ V V+ LI + T++E V+ R K ++ + ++NA Sbjct: 1937 KDLQAMDR-----AHRLGQKKVVNVHRLIMRGTLEEKVMSLQRFKVSVANAVINA 1986 >gi|66360055|ref|XP_627205.1| Swr1p like SWI/SNF2 family ATpase with a HSA domain at the N-terminus probably involved in chromatin remodelling [Cryptosporidium parvum Iowa II] gi|46228613|gb|EAK89483.1| Swr1p like SWI/SNF2 family ATpase with a HSA domain at the N-terminus probably involved in chromatin remodelling [Cryptosporidium parvum Iowa II] Length = 1371 Score = 100 bits (250), Expect = 1e-19, Method: Composition-based stats. Identities = 40/209 (19%), Positives = 84/209 (40%), Gaps = 23/209 (11%) Query: 3 QYHKFQRELYCD--LQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 +Y + EL+C+ + + NS++ + + + + E K + L Sbjct: 988 KYSFVKNELFCNSYISLQVDNLINSSNAYLHNISFFKKCI--VPPRRIIEDDCGKFQILS 1045 Query: 61 VIIEKA--NAAPIIVAYHFNSDLARLQ---------KAFPQGRTL-DKDPCTIQEWNEG- 107 ++ K I+ + L L+ G T D + +N Sbjct: 1046 RLLHKLFNEGHRCIIFTQMSKMLDVLESFINYRGYNYLRLDGSTKVDDRQKLVNRFNRDQ 1105 Query: 108 KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFV 167 +I L + S G GLNL G + ++F+ W+ +Q ++R + G R V + Sbjct: 1106 RIYLFISSTRSGGVGLNLT-GADTVIFYDSDWNPAMDRQAMDRC-----HRIGQTRDVNI 1159 Query: 168 YYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 Y L+++ TI+E + ++ K + D++++ Sbjct: 1160 YRLVSEWTIEESIFKKQLQKRLLDDVVVD 1188 >gi|114596225|ref|XP_001144256.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent regulator of chromatin a5 isoform 1 [Pan troglodytes] Length = 1013 Score = 100 bits (250), Expect = 1e-19, Method: Composition-based stats. Identities = 42/230 (18%), Positives = 86/230 (37%), Gaps = 40/230 (17%) Query: 1 MKQY---HKFQRELYCDLQGENIEAFNSASKTVK------CLQL--ANGAVYYDEEKHW- 48 +K Y K QRE Y + ++I+ NSA K K +QL Y + Sbjct: 410 VKIYVGLSKMQREWYTRILMKDIDILNSAGKMDKMRLLNILMQLRKCCNHPYLFDGAEPG 469 Query: 49 --------KEVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQ---------KAFP 89 + K+ L+ ++ K + +++ L L+ Sbjct: 470 PPYTTDMHLVTNSGKMVVLDKLLPKLKEQGSRVLIFSQMTRVLDILEDYCMWRNYEYCRL 529 Query: 90 QGRTLDKDPCT-IQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 G+T + I +NE + + G G+NL ++++ + W+ + Q Sbjct: 530 DGQTPHDERQDSINAYNEPNSTKFVFMLSTRAGGLGINL-ATADVVILYDSDWNPQVDLQ 588 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 ++R + G + V V+ I NT++E +++R K + +++ Sbjct: 589 AMDR-----AHRIGQTKTVRVFRFITDNTVEERIVERAEMKLRLDSIVIQ 633 >gi|116195488|ref|XP_001223556.1| hypothetical protein CHGG_04342 [Chaetomium globosum CBS 148.51] gi|88180255|gb|EAQ87723.1| hypothetical protein CHGG_04342 [Chaetomium globosum CBS 148.51] Length = 836 Score = 100 bits (250), Expect = 1e-19, Method: Composition-based stats. Identities = 26/140 (18%), Positives = 54/140 (38%), Gaps = 18/140 (12%) Query: 68 AAPIIVAYHFNSDLARLQK-----------AFPQGRTLDKDPCTIQEWN-EGKIPLLFAH 115 +++ F + L L+ G + I ++N + K+ + Sbjct: 615 GHKVLIFSQFKTQLDILEDYCSELRKWPVCRIDGGVAQEDRRTEIHQFNTDPKLKIFLLS 674 Query: 116 PASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNT 175 + G G+NL + ++ F W+ ++ Q R + G R V VY L + T Sbjct: 675 TRAGGQGINL-ASADTVILFDSDWNPQQDLQA-----QDRAHRIGQTRPVIVYRLATKGT 728 Query: 176 IDELVLQRLRTKSTIQDLLL 195 ++E +L K ++ L++ Sbjct: 729 VEEGLLMSADAKRRLEKLVI 748 >gi|320583294|gb|EFW97509.1| helicase [Pichia angusta DL-1] Length = 794 Score = 100 bits (250), Expect = 1e-19, Method: Composition-based stats. Identities = 39/180 (21%), Positives = 68/180 (37%), Gaps = 24/180 (13%) Query: 35 LANGAVYYDE--EKHWKEVHDEKIKALEVIIE---KANAAPIIVAYHFNSDLARLQKAF- 88 + G D+ + +V KI L +++ K ++V +F L L+K Sbjct: 500 MFAGLCGVDDLRGELGSKVRSAKIILLVKLLKGIYKLKQEKVVVVSNFTQTLDVLEKLMN 559 Query: 89 ---------PQGRTLDKDPCTIQEWNEGKIP---LLFAHPASCGHGLNLQYGGNILVFFS 136 + + ++N+ + S G GLNL G + L+ F Sbjct: 560 VLELPFTRLDGATPANLRDKIVSDFNKASWDMSFVFLLSAKSGGMGLNL-VGASRLILFD 618 Query: 137 LWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 W+ Q + R+ + G R V VY L+ IDE + QR K+++ D L+ Sbjct: 619 NDWNPAVDLQAMARV-----HRDGQTRPVHVYRLLTAGCIDEKIFQRQLIKTSLSDKFLD 673 >gi|327198375|ref|YP_004306949.1| putative ATP-dependent helicase [Streptococcus phage Dp-1] gi|314912677|gb|ADT64068.1| putative ATP-dependent helicase [Streptococcus phage Dp-1] Length = 545 Score = 100 bits (250), Expect = 1e-19, Method: Composition-based stats. Identities = 37/206 (17%), Positives = 77/206 (37%), Gaps = 21/206 (10%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEV 61 K Y + +L ++ + N ++T++ Q ++V K + Sbjct: 335 KIYKEVLTKLVQEIDKVKLM-PNPLAETIRLRQATGNPSIL----TTQDVKSCKFERCIE 389 Query: 62 IIEK--ANAAPIIVAYHFNSDLARLQKAFPQ--------GRTLDKDPCTIQEWNEGKIPL 111 I+E+ ++ ++ + L K + G T DK + N K + Sbjct: 390 IVEECIQQGKSCVIFSNWEKVIEPLAKILSKTVKCNLVTGETADKFNEIEEFMNHRKASV 449 Query: 112 LFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLI 171 + + G G L + ++F W E Q +R + G K +V +Y L+ Sbjct: 450 ILGTIGALGTGFTLTK-ADTVIFLDSPWTRAEKDQAEDRC-----HRIGAKSSVTIYTLV 503 Query: 172 AQNTIDELVLQRLRTKSTIQDLLLNA 197 A+ T+DE + + K + D +++ Sbjct: 504 AKGTVDERIEDLIERKGELADYIVDG 529 >gi|284034556|ref|YP_003384487.1| SNF2-like protein [Kribbella flavida DSM 17836] gi|283813849|gb|ADB35688.1| SNF2-related protein [Kribbella flavida DSM 17836] Length = 742 Score = 100 bits (250), Expect = 1e-19, Method: Composition-based stats. Identities = 36/199 (18%), Positives = 83/199 (41%), Gaps = 24/199 (12%) Query: 5 HKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIE 64 K + + + E+ A+ SA ++ +++ A ++ K++ + I+E Sbjct: 503 EKIEIDDWVLPTAEDKAAYVSAVRSGNLMRMRQAA--------FEVAGSAKLERIAEIVE 554 Query: 65 KA--NAAPIIVAYHFNSDLARLQKA-------FPQGRTLDKDPCTIQEWNE-GKIPLLFA 114 +A + ++V +F + L R+++A + + E+ +L + Sbjct: 555 EAREDGRKVVVFSYFLTVLDRIEQAVGPTTGSIRGAVGPTERQRLVDEFTAAPGHAVLLS 614 Query: 115 HPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQN 174 + G GLN+Q ++++ W QQ + R + G R V V+ L+A++ Sbjct: 615 QIEAGGVGLNMQ-AASVVILAEPHWKPSTEQQAVAR-----AHRMGQIRTVQVHRLLAKD 668 Query: 175 TIDELVLQRLRTKSTIQDL 193 T+D+ + + K + D Sbjct: 669 TVDDRIREVQEHKRLLFDE 687 >gi|190406613|gb|EDV09880.1| conserved hypothetical protein [Saccharomyces cerevisiae RM11-1a] Length = 853 Score = 100 bits (250), Expect = 1e-19, Method: Composition-based stats. Identities = 30/162 (18%), Positives = 66/162 (40%), Gaps = 20/162 (12%) Query: 52 HDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQK---------AFPQGRTLDKDPCT 100 K++ L+ +I + +++ F + L ++ G ++ Sbjct: 601 TSGKLQILQKLIPPLISEGHKVLIYSQFVNMLDLIEDWCDLNSFATFRIDGSVNNETRKD 660 Query: 101 -IQEWNE--GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 ++++N K + + G G+NL G + +V F W+ + Q ++R Sbjct: 661 QLEKFNSSKDKHNIFLLSTRAAGLGINL-VGADTVVLFDSDWNPQVDLQAMDRC-----H 714 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 + G + V VY L NTI+ ++L R K ++ +++ K Sbjct: 715 RIGQESPVIVYRLCCDNTIEHVILTRAANKRNLERMVIQMGK 756 >gi|42742173|ref|NP_116696.2| Irc5p [Saccharomyces cerevisiae S288c] gi|84028283|sp|P43610|IRC5_YEAST RecName: Full=Uncharacterized ATP-dependent helicase IRC5; AltName: Full=Increased recombination centers protein 5 gi|285811936|tpg|DAA12481.1| TPA: Irc5p [Saccharomyces cerevisiae S288c] Length = 853 Score = 100 bits (250), Expect = 1e-19, Method: Composition-based stats. Identities = 30/162 (18%), Positives = 66/162 (40%), Gaps = 20/162 (12%) Query: 52 HDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQK---------AFPQGRTLDKDPCT 100 K++ L+ +I + +++ F + L ++ G ++ Sbjct: 601 TSGKLQILQKLIPPLISEGHKVLIYSQFVNMLDLIEDWCDLNSFATFRIDGSVNNETRKD 660 Query: 101 -IQEWNE--GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 ++++N K + + G G+NL G + +V F W+ + Q ++R Sbjct: 661 QLEKFNSSKDKHNIFLLSTRAAGLGINL-VGADTVVLFDSDWNPQVDLQAMDRC-----H 714 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 + G + V VY L NTI+ ++L R K ++ +++ K Sbjct: 715 RIGQESPVIVYRLCCDNTIEHVILTRAANKRNLERMVIQMGK 756 >gi|71400983|ref|XP_803224.1| transcription activator [Trypanosoma cruzi strain CL Brener] gi|70865998|gb|EAN81778.1| transcription activator, putative [Trypanosoma cruzi] Length = 1038 Score = 100 bits (250), Expect = 1e-19, Method: Composition-based stats. Identities = 42/232 (18%), Positives = 83/232 (35%), Gaps = 42/232 (18%) Query: 8 QRELYCDLQGENIEAFNSAS---------KTVKCLQLANGAVYYDEE--------KHWKE 50 QR+ Y + ++ EA N AS + ++ N D Sbjct: 411 QRKWYMHVLAKDAEALNKASGGSMSSLTNIMMNLRKVINHPYMMDGGEEGPPFITDERIV 470 Query: 51 VHDEKIKALEVII-----EKANAAPIIVAYHFNSDLARLQK---------AFPQGRT--L 94 H K+ L+ ++ EK +++ F + L L+ G T Sbjct: 471 KHSGKMMILDKLLYRLRREKEEKHKVLIFSQFTTMLDILEDYCGMRGFRVCRIDGNTSGY 530 Query: 95 DKDPCTIQEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIG 152 D+D + +N + + G G+NLQ ++++ + W+ + Q Sbjct: 531 DRDAQ-MAAFNSPNSDYFIFLLSTRAGGLGINLQAANHVVI-YDSDWNPQMDLQA----- 583 Query: 153 VTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIH 204 R + G KR V VY I + T++E + +R K + +++ + + Sbjct: 584 QDRAHRIGQKRVVRVYRFITEGTVEEKIYRRALKKLYLDAMVVQHGRMQGRG 635 >gi|209945994|gb|ACI97228.1| okra [Drosophila melanogaster] Length = 167 Score = 100 bits (250), Expect = 1e-19, Method: Composition-based stats. Identities = 30/143 (20%), Positives = 59/143 (41%), Gaps = 19/143 (13%) Query: 58 ALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGR----------TLDKDPCTIQEWNEG 107 L I + N +++ ++ L ++ + + ++ K + +N+ Sbjct: 32 MLAAIRAEGNDKVVLI-SNYTQTLDLFEQLARKRKYGFVRLDGTMSIKKRSKVVDRFNDP 90 Query: 108 KIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 + L + G GLNL G N L F W+ +Q + R+ + G K+ Sbjct: 91 ESDSFLFMLSSKAGGCGLNL-IGANRLFMFDPDWNPANDEQAMARVW-----RDGQKKPC 144 Query: 166 FVYYLIAQNTIDELVLQRLRTKS 188 ++Y L+A +I+E +LQR K Sbjct: 145 YIYRLVASGSIEEKILQRQTHKK 167 >gi|294955608|ref|XP_002788590.1| DNA repair helicase, putative [Perkinsus marinus ATCC 50983] gi|239904131|gb|EER20386.1| DNA repair helicase, putative [Perkinsus marinus ATCC 50983] Length = 857 Score = 100 bits (250), Expect = 1e-19, Method: Composition-based stats. Identities = 40/205 (19%), Positives = 71/205 (34%), Gaps = 29/205 (14%) Query: 16 QGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVH------DEKIKAL----EVIIEK 65 G++ + N A+ +L N + K KI+AL E + + Sbjct: 641 DGDDADDGNLAACMSGLRELQNDPRLPRKHSILKRAPVANFESSSKIEALVAEVEAMRKA 700 Query: 66 ANAAPIIVAYHFNSDLARLQKAFPQGRT----------LDKDPCTIQEW---NEGKIPLL 112 A +V F S L Q + L ++ + + PLL Sbjct: 701 DGEAKGLVFSSFVSLLELCQYRLHKAGITTLILHGELPLPLRAKVMKTFVESSADTCPLL 760 Query: 113 FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIA 172 S G GLNLQ N + WW+ QQ +R + G + V V ++ Sbjct: 761 LISLMSGGEGLNLQV-ANHVFLLDPWWNPAVEQQATQR-----AHRLGQSKRVQVLKMLT 814 Query: 173 QNTIDELVLQRLRTKSTIQDLLLNA 197 +TI++ ++ K + +++ Sbjct: 815 HDTIEDRIVALQEKKRAVCRGIIDG 839 >gi|151940802|gb|EDN59189.1| conserved protein [Saccharomyces cerevisiae YJM789] Length = 853 Score = 100 bits (250), Expect = 1e-19, Method: Composition-based stats. Identities = 30/162 (18%), Positives = 66/162 (40%), Gaps = 20/162 (12%) Query: 52 HDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQK---------AFPQGRTLDKDPCT 100 K++ L+ +I + +++ F + L ++ G ++ Sbjct: 601 TSGKLQILQKLIPPLISEGHKVLIYSQFVNMLDLIEDWCDLNSFATFRIDGSVNNETRKD 660 Query: 101 -IQEWNE--GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 ++++N K + + G G+NL G + +V F W+ + Q ++R Sbjct: 661 QLEKFNSSKDKHNIFLLSTRAAGLGINL-VGADTVVLFDSDWNPQVDLQAMDRC-----H 714 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 + G + V VY L NTI+ ++L R K ++ +++ K Sbjct: 715 RIGQESPVIVYRLCCDNTIEHVILTRAANKRNLERMVIQMGK 756 >gi|260549505|ref|ZP_05823723.1| conserved hypothetical protein [Acinetobacter sp. RUH2624] gi|260407298|gb|EEX00773.1| conserved hypothetical protein [Acinetobacter sp. RUH2624] Length = 72 Score = 100 bits (250), Expect = 1e-19, Method: Composition-based stats. Identities = 39/68 (57%), Positives = 57/68 (83%) Query: 134 FFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDL 193 FFS WWDLE++QQ+IERIG TRQ QAG+ R V++Y++IA++T+DE+V++R +K +QDL Sbjct: 2 FFSHWWDLEQYQQIIERIGPTRQAQAGYDRPVYIYHIIAKDTMDEIVMERRESKREVQDL 61 Query: 194 LLNALKKE 201 L+ A+KK Sbjct: 62 LMEAMKKR 69 >gi|255954897|ref|XP_002568201.1| Pc21g11700 [Penicillium chrysogenum Wisconsin 54-1255] gi|211589912|emb|CAP96067.1| Pc21g11700 [Penicillium chrysogenum Wisconsin 54-1255] Length = 1671 Score = 100 bits (250), Expect = 1e-19, Method: Composition-based stats. Identities = 30/166 (18%), Positives = 68/166 (40%), Gaps = 19/166 (11%) Query: 44 EEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAF---------PQGR 92 +K + K++ L+ ++ A ++ L L++ G Sbjct: 1358 PDKRLLQYDCGKLQRLDKLLRDLKAGGHRALIFTQMTKMLDILEQFLNIHGHRYLRLDGT 1417 Query: 93 TLDKDPCTI-QEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 T + + + +N + +I S G G+NL G + ++F+ L W+ +Q +R Sbjct: 1418 TKVESRQMLTERFNSDPRILAFILSSRSGGLGINLT-GADTVIFYDLDWNPAMDKQCQDR 1476 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + G R V +Y +++ TI+ +L++ K + D+++ Sbjct: 1477 C-----HRIGQTRDVHIYRFVSEYTIESNILRKANQKRMLDDVIIQ 1517 >gi|196010573|ref|XP_002115151.1| hypothetical protein TRIADDRAFT_28849 [Trichoplax adhaerens] gi|190582534|gb|EDV22607.1| hypothetical protein TRIADDRAFT_28849 [Trichoplax adhaerens] Length = 849 Score = 100 bits (250), Expect = 1e-19, Method: Composition-based stats. Identities = 33/215 (15%), Positives = 75/215 (34%), Gaps = 26/215 (12%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYD-------EEKHWKEVHDE 54 K Y + L + + ++ + N ++ E Sbjct: 252 KLYKALLQRNIESLT-NEASKTSLMNMLIQLRKCVNHPYLFNGIEPEPFEIGDHLINASG 310 Query: 55 KIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAF---------PQGRTLDKDP-CTIQ 102 K+ L+ ++ K+ +++ L LQ G ++ IQ Sbjct: 311 KLFLLDKLLPYLKSRGHKVLIFSQMTRMLDILQDYLSYKDYNYERLDGSVRGEERYLAIQ 370 Query: 103 EWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFK 162 + + + + + G GLNL + ++FF ++ + Q R + G Sbjct: 371 NFTDPDVFVFILSTKAGGVGLNL-VAADTVIFFDSDFNPQNDIQAAARC-----HRIGQT 424 Query: 163 RAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + V + +AQ+T++E++L+R K + D ++ Sbjct: 425 KPVKIIRFVAQSTVEEIILKRAEAKLKLTDAVIEG 459 >gi|25144179|ref|NP_498468.2| yeast ISW (imitation SWI) homolog family member (isw-1) [Caenorhabditis elegans] gi|21264515|sp|P41877|ISW1_CAEEL RecName: Full=Chromatin-remodeling complex ATPase chain isw-1; AltName: Full=Nucleosome-remodeling factor subunit isw-1 gi|16950408|gb|AAA50636.2| Yeast isw (imitation swi) homolog protein 1 [Caenorhabditis elegans] Length = 1009 Score = 100 bits (250), Expect = 1e-19, Method: Composition-based stats. Identities = 43/230 (18%), Positives = 90/230 (39%), Gaps = 40/230 (17%) Query: 1 MKQY---HKFQRELYCDLQGENIEAFNSASKTVK---------CLQLANGAVYYD----- 43 +K Y K QRE Y + ++I+ N A K K + N +D Sbjct: 362 VKVYVGLSKMQREWYTKVLMKDIDIINGAGKVEKARLMNILMHLRKCVNHPYLFDGAEPG 421 Query: 44 ---EEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQ---------KAFP 89 + K+ L+ ++ K + +++ F+ L L+ Sbjct: 422 PPFTTDQHLVDNSGKMVVLDKLLMKFKEQGSRVLIFSQFSRMLDLLEDFCWWRHYEYCRL 481 Query: 90 QGRTLDKD-PCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 G T +D I+ +N + + G G+NL ++++ + W+ + Q Sbjct: 482 DGSTPHEDRSNAIEAYNAPDSKKFIFMLTTRAGGLGINL-ATADVVIIYDSDWNPQSDLQ 540 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 ++R + G K+ V V+ LI +NT+DE ++++ K + ++++ Sbjct: 541 AMDR-----AHRIGQKKQVRVFRLITENTVDERIIEKAEAKLRLDNIVIQ 585 >gi|315048045|ref|XP_003173397.1| ISWI chromatin-remodeling complex ATPase ISW1 [Arthroderma gypseum CBS 118893] gi|311341364|gb|EFR00567.1| ISWI chromatin-remodeling complex ATPase ISW1 [Arthroderma gypseum CBS 118893] Length = 767 Score = 100 bits (250), Expect = 1e-19, Method: Composition-based stats. Identities = 26/146 (17%), Positives = 55/146 (37%), Gaps = 18/146 (12%) Query: 66 ANAAPIIVAYHFNSDLARLQKAFPQGR------------TLDKDPCTIQEWNEGKIPLLF 113 + +++ F L L+ Q R D+ ++ + Sbjct: 537 SKGHKVLIFSQFKGQLDILEDWATQLRSWNCCRIDGAIAQADRQEQINAFNSDPDYRIFL 596 Query: 114 AHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQ 173 + G G+NL + ++ F W+ ++ Q R + G + V VY L + Sbjct: 597 LSTRAGGQGINLT-AADTVILFDSDWNPQQDLQA-----QDRAHRIGQTKPVIVYRLATR 650 Query: 174 NTIDELVLQRLRTKSTIQDLLLNALK 199 TI++ +L+R +K ++ L++ K Sbjct: 651 GTIEQTLLERAGSKRRLEKLVIQKGK 676 >gi|296478735|gb|DAA20850.1| SWI/SNF-related matrix-associated actin-dependent regulator of chromatin a5 [Bos taurus] Length = 1052 Score = 100 bits (250), Expect = 1e-19, Method: Composition-based stats. Identities = 43/230 (18%), Positives = 88/230 (38%), Gaps = 40/230 (17%) Query: 1 MKQY---HKFQRELYCDLQGENIEAFNSASKTVK------CLQL--ANGAVYYDEEKHW- 48 +K Y K QRE Y + ++I+ NSA K K +QL Y + Sbjct: 410 VKIYVGLSKMQREWYTRILMKDIDILNSAGKMDKMRLLNILMQLRKCCNHPYLFDGAEPG 469 Query: 49 --------KEVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQ---------KAFP 89 + K+ L+ ++ K + +++ L L+ Sbjct: 470 PPYTTDMHLVTNSGKMVVLDKLLPKLKEQGSRVLIFSQMTRVLDILEDYCMWRNYEYCRL 529 Query: 90 QGRTL-DKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 G+T D+ +I +NE + + G G+NL ++++ + W+ + Q Sbjct: 530 DGQTPHDERQESINAYNEPNSTKFVFMLSTRAGGLGINL-ATADVVILYDSDWNPQVDLQ 588 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 ++R + G + V V+ I NT++E +++R K + +++ Sbjct: 589 AMDR-----AHRIGQTKTVRVFRFITDNTVEERIVERAEMKLRLDSIVIQ 633 >gi|70950861|ref|XP_744718.1| hypothetical protein [Plasmodium chabaudi chabaudi] gi|56524786|emb|CAH76731.1| conserved hypothetical protein [Plasmodium chabaudi chabaudi] Length = 1330 Score = 100 bits (250), Expect = 1e-19, Method: Composition-based stats. Identities = 29/181 (16%), Positives = 66/181 (36%), Gaps = 20/181 (11%) Query: 35 LANGAVYYDEEKHWKEVHDEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQ------- 85 L + DE + KI LE ++ + +++ L L Sbjct: 844 LCCEPIDKDEYRERLVYSSGKICLLEKLLIRLKERGNRVLIFSQMVKMLNILSEYLTLRG 903 Query: 86 ---KAFPQGRTLDKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWD 140 + T + + +N + + G G+NL + ++ + W+ Sbjct: 904 FKHQRLDGTMTKEMRKKAMNHFNSKNSDDFVFLLSTKAGGLGINLT-SADTVIIYDSDWN 962 Query: 141 LEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKK 200 + Q R + G + V +Y L+ +++I++ +L+R + K + L++ L K Sbjct: 963 PQNDLQAGAR-----AHRIGQTKTVQIYRLVTKDSIEQTILERAKVKMVLDTLVVQGLNK 1017 Query: 201 E 201 + Sbjct: 1018 K 1018 >gi|144369229|dbj|BAF56217.1| OsRad54 [Oryza sativa Japonica Group] Length = 980 Score = 100 bits (250), Expect = 1e-19, Method: Composition-based stats. Identities = 27/110 (24%), Positives = 51/110 (46%), Gaps = 8/110 (7%) Query: 87 AFPQGRTLDKDPCTIQEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEH 144 +++K + ++N+ + + G GLNL GGN L+ F W+ Sbjct: 635 RLDGATSINKRQKLVNQFNDPSRDEFVFLLSSKAGGCGLNL-VGGNRLILFDPDWNPAND 693 Query: 145 QQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 +Q R+ + G K+ V++Y ++ TI+E V QR +K +Q ++ Sbjct: 694 KQAAARVW-----RDGQKKRVYIYRFLSTGTIEEKVYQRQMSKEGLQKVI 738 >gi|73977788|ref|XP_867147.1| PREDICTED: similar to SWI/SNF related matrix associated actin dependent regulator of chromatin subfamily A member 5 (SWI/SNF-related matrix-associated actin-dependent regulator of chromatin A5) (Sucrose nonfermenting protein 2 homolog) (hSNF2H)... isoform 5 [Canis familiaris] Length = 1056 Score = 100 bits (250), Expect = 1e-19, Method: Composition-based stats. Identities = 43/235 (18%), Positives = 90/235 (38%), Gaps = 40/235 (17%) Query: 1 MKQY---HKFQRELYCDLQGENIEAFNSASKTVK------CLQL--ANGAVYYDEEKHW- 48 +K Y K QRE Y + ++I+ NSA K K +QL Y + Sbjct: 410 VKIYVGLSKMQREWYTRILMKDIDILNSAGKMDKMRLLNILMQLRKCCNHPYLFDGAEPG 469 Query: 49 --------KEVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQ---------KAFP 89 + K+ L+ ++ K + +++ L L+ Sbjct: 470 PPYTTDMHLVTNSGKMVVLDKLLPKLKEQGSRVLIFSQMTRVLDILEDYCMWRNYEYCRL 529 Query: 90 QGRTL-DKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 G+T D+ +I +NE + + G G+NL ++++ + W+ + Q Sbjct: 530 DGQTPHDERQESINAYNEPNSTKFVFMLSTRAGGLGINL-ATADVVILYDSDWNPQVDLQ 588 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 ++R + G + V V+ I NT++E +++R K + +++ + + Sbjct: 589 AMDR-----AHRIGQTKTVRVFRFITDNTVEERIVERAEMKLRLDSIVIQQGEAK 638 >gi|308509388|ref|XP_003116877.1| CRE-BTF-1 protein [Caenorhabditis remanei] gi|308241791|gb|EFO85743.1| CRE-BTF-1 protein [Caenorhabditis remanei] Length = 1668 Score = 100 bits (250), Expect = 1e-19, Method: Composition-based stats. Identities = 44/200 (22%), Positives = 71/200 (35%), Gaps = 28/200 (14%) Query: 14 DLQGENIEAFNSASKTVKCLQLANGA-VYYDEEKHWKEVHDEKIKALEVIIEKANAAPII 72 D+ + A + K QL + + + DE L + E + Sbjct: 1406 DILAKARTARSG--KMEALKQLLIECEICKNPDDEVLPEADE----LGGLNEAGPGHRAL 1459 Query: 73 VAYHFNSDLARLQKAFPQGR--------TLDKDP------CTIQEWNEGK-IPLLFAHPA 117 + + + + A G LD D + +NE K I +L Sbjct: 1460 IFCQWKTSAKLVSNALSSGEFGSVVSHLVLDGDVPAGDRMKMVNRFNEDKTIDVLILTTH 1519 Query: 118 SCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 G GLNL G + ++F W+ + Q I+R + G R V VY LI Q T++ Sbjct: 1520 VGGVGLNLT-GADTVIFLDHDWNPMKDLQAIDR-----AHRLGQTRNVNVYRLITQGTVE 1573 Query: 178 ELVLQRLRTKSTIQDLLLNA 197 E V+ + K L+ A Sbjct: 1574 EKVMSLAKFKLNTAQALIGA 1593 >gi|311262519|ref|XP_003129222.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 [Sus scrofa] Length = 1052 Score = 100 bits (250), Expect = 1e-19, Method: Composition-based stats. Identities = 43/230 (18%), Positives = 88/230 (38%), Gaps = 40/230 (17%) Query: 1 MKQY---HKFQRELYCDLQGENIEAFNSASKTVK------CLQL--ANGAVYYDEEKHW- 48 +K Y K QRE Y + ++I+ NSA K K +QL Y + Sbjct: 410 VKIYVGLSKMQREWYTRILMKDIDILNSAGKMDKMRLLNILMQLRKCCNHPYLFDGAEPG 469 Query: 49 --------KEVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQ---------KAFP 89 + K+ L+ ++ K + +++ L L+ Sbjct: 470 PPYTTDMHLVTNSGKMVVLDKLLPKLKEQGSRVLIFSQMTRVLDILEDYCMWRNYEYCRL 529 Query: 90 QGRTL-DKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 G+T D+ +I +NE + + G G+NL ++++ + W+ + Q Sbjct: 530 DGQTPHDERQESINAYNEPNSTKFVFMLSTRAGGLGINL-ATADVVILYDSDWNPQVDLQ 588 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 ++R + G + V V+ I NT++E +++R K + +++ Sbjct: 589 AMDR-----AHRIGQTKTVRVFRFITDNTVEERIVERAEMKLRLDSIVIQ 633 >gi|293342854|ref|XP_002725339.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent regulator of chromatin a5-like [Rattus norvegicus] Length = 1046 Score = 100 bits (250), Expect = 1e-19, Method: Composition-based stats. Identities = 42/230 (18%), Positives = 86/230 (37%), Gaps = 40/230 (17%) Query: 1 MKQY---HKFQRELYCDLQGENIEAFNSASKTVK------CLQL--ANGAVYYDEEKHW- 48 +K Y K QRE Y + ++I+ NSA K K +QL Y + Sbjct: 208 VKIYVGLSKMQREWYTRILMKDIDILNSAGKMDKMRLLNILMQLRKCCNHPYLFDGAEPG 267 Query: 49 --------KEVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQ---------KAFP 89 + K+ L+ ++ K + +++ L L+ Sbjct: 268 PPYTTDMHLVTNSGKMVVLDKLLPKLKEQGSRVLIFSQMTRVLDILEDYCMWRNYEYCRL 327 Query: 90 QGRTLDKDPCT-IQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 G+T + I +NE + + G G+NL ++++ + W+ + Q Sbjct: 328 DGQTPHDERQDSINAYNEPNSTKFVFMLSTRAGGLGINL-ATADVVILYDSDWNPQVDLQ 386 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 ++R + G + V V+ I NT++E +++R K + +++ Sbjct: 387 AMDR-----AHRIGQTKTVRVFRFITDNTVEERIVERAEMKLRLDSIVIQ 431 >gi|157427958|ref|NP_001098886.1| SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 [Bos taurus] gi|157279332|gb|AAI53226.1| SMARCA5 protein [Bos taurus] Length = 1052 Score = 100 bits (250), Expect = 1e-19, Method: Composition-based stats. Identities = 43/230 (18%), Positives = 88/230 (38%), Gaps = 40/230 (17%) Query: 1 MKQY---HKFQRELYCDLQGENIEAFNSASKTVK------CLQL--ANGAVYYDEEKHW- 48 +K Y K QRE Y + ++I+ NSA K K +QL Y + Sbjct: 410 VKIYVGLSKMQREWYTRILMKDIDILNSAGKMDKMRLLNILMQLRKCCNHPYLFDGAEPG 469 Query: 49 --------KEVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQ---------KAFP 89 + K+ L+ ++ K + +++ L L+ Sbjct: 470 PPYTTDMHLVTNSGKMVVLDKLLPKLKEQGSRVLIFSQMTRVLDILEDYCMWRNYEYCRL 529 Query: 90 QGRTL-DKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 G+T D+ +I +NE + + G G+NL ++++ + W+ + Q Sbjct: 530 DGQTPHDERQESINAYNEPNSTKFVFMLSTRAGGLGINL-ATADVVILYDSDWNPQVDLQ 588 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 ++R + G + V V+ I NT++E +++R K + +++ Sbjct: 589 AMDR-----AHRIGQTKTVRVFRFITDNTVEERIVERAEMKLRLDSIVIQ 633 >gi|146419456|ref|XP_001485690.1| hypothetical protein PGUG_01361 [Meyerozyma guilliermondii ATCC 6260] Length = 1103 Score = 100 bits (250), Expect = 1e-19, Method: Composition-based stats. Identities = 42/206 (20%), Positives = 80/206 (38%), Gaps = 32/206 (15%) Query: 4 YHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVII 63 Y + E + E F S + ++ NG KI+ ++ Sbjct: 884 YDEEAIEDLFSPKSRAPEKFTSTDIISRLIEETNGF-----------TPSTKIEKCIELV 932 Query: 64 EK----ANAAPIIVAYHFN--SDLARL---QKAFPQGR-----TLDKDPCTIQEWNEGKI 109 + + IIV F DL +L +K P R +LD TI+ + +G Sbjct: 933 NQIRTKSLEEKIIVFSQFTTLFDLMKLVLDKKGIPFLRYDGSMSLDARNNTIKNFYQGLT 992 Query: 110 PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYY 169 +L + GL L N ++ +W+ +Q ++R + G +R VFV+ Sbjct: 993 QVLLISLRAGNVGLTLTC-ANHVILMDPFWNPFVEEQAMDR-----AHRIGQQREVFVHR 1046 Query: 170 LIAQNTIDELVLQRLR-TKSTIQDLL 194 ++ +TI+ +++ + K +Q+ L Sbjct: 1047 ILLNDTIEGRIMELQKYKKEMVQNAL 1072 >gi|297293442|ref|XP_002804257.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5-like [Macaca mulatta] Length = 1052 Score = 100 bits (250), Expect = 1e-19, Method: Composition-based stats. Identities = 42/230 (18%), Positives = 86/230 (37%), Gaps = 40/230 (17%) Query: 1 MKQY---HKFQRELYCDLQGENIEAFNSASKTVK------CLQL--ANGAVYYDEEKHW- 48 +K Y K QRE Y + ++I+ NSA K K +QL Y + Sbjct: 410 VKIYVGLSKMQREWYTRILMKDIDILNSAGKMDKMRLLNILMQLRKCCNHPYLFDGAEPG 469 Query: 49 --------KEVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQ---------KAFP 89 + K+ L+ ++ K + +++ L L+ Sbjct: 470 PPYTTDMHLVTNSGKMVVLDKLLPKLKEQGSRVLIFSQMTRVLDILEDYCMWRNYEYCRL 529 Query: 90 QGRTLDKDPCT-IQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 G+T + I +NE + + G G+NL ++++ + W+ + Q Sbjct: 530 DGQTPHDERQDSINAYNEPNSTKFVFMLSTRAGGLGINL-ATADVVILYDSDWNPQVDLQ 588 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 ++R + G + V V+ I NT++E +++R K + +++ Sbjct: 589 AMDR-----AHRIGQTKTVRVFRFITDNTVEERIVERAEMKLRLDSIVIQ 633 >gi|50290775|ref|XP_447820.1| hypothetical protein [Candida glabrata CBS 138] gi|49527131|emb|CAG60769.1| unnamed protein product [Candida glabrata] Length = 844 Score = 100 bits (250), Expect = 1e-19, Method: Composition-based stats. Identities = 29/162 (17%), Positives = 59/162 (36%), Gaps = 20/162 (12%) Query: 52 HDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQK----------AFPQGRTLDKDPC 99 K++ L+ + I++ F L L+ G + Sbjct: 593 SSGKLQMLQKLAIPLIKKGHKILIFSQFVGMLDLLEDWSELNSFNSLRIDGGVDNESRKE 652 Query: 100 TIQEWNE--GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 I E+N+ + + G G+NL + ++ F W+ + Q ++R Sbjct: 653 YIDEFNKKGDDHQIFLLSTRAAGLGINL-VAADTVIIFDSDWNPQVDLQAMDRC-----H 706 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 + G + V VY NTI+ ++L R K ++ +++ K Sbjct: 707 RIGQTKPVIVYRFCCDNTIEHVILTRAVNKRKLERMVIQMGK 748 >gi|325118669|emb|CBZ54220.1| hypothetical protein NCLIV_046520 [Neospora caninum Liverpool] Length = 1703 Score = 100 bits (250), Expect = 1e-19, Method: Composition-based stats. Identities = 35/162 (21%), Positives = 59/162 (36%), Gaps = 22/162 (13%) Query: 52 HDEKIKAL----EVIIEKANAAPIIVAYHFNSDLARLQKAFPQG-----------RTLDK 96 KI+AL I + +V F S L ++ +G + + Sbjct: 1529 SSTKIEALYQELLDIEREDTTVKSLVFSQFCSMLDLIEWRLKKGGIHCAKLVGSMSIVSR 1588 Query: 97 DPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 N+ + +L + G GLNLQ + + WW+ Q I+R Sbjct: 1589 SNVLYAFNNDPSLKVLLISLKAGGEGLNLQI-ASRIFLMDPWWNPAAEMQAIQR-----A 1642 Query: 157 RQAGF-KRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + G ++ V IA+ TI+E +LQ K + D + A Sbjct: 1643 HRIGQRQKEVIAVRFIAEKTIEERILQLQEKKQLVFDGTVGA 1684 >gi|330846201|ref|XP_003294935.1| hypothetical protein DICPUDRAFT_85378 [Dictyostelium purpureum] gi|325074496|gb|EGC28539.1| hypothetical protein DICPUDRAFT_85378 [Dictyostelium purpureum] Length = 2294 Score = 100 bits (250), Expect = 1e-19, Method: Composition-based stats. Identities = 31/167 (18%), Positives = 67/167 (40%), Gaps = 19/167 (11%) Query: 44 EEKHWKEVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQK----------AFPQG 91 +K + K++ + +++ K ++ L ++ Sbjct: 1188 PDKRLVQYDCGKLQEMAILLRKLKNGGHRALIFTQMTRMLDIFEEFLNIHGYTYLRLDGS 1247 Query: 92 RTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 ++K + +N + KI L S G GLNL G + ++F+ W+ Q +R Sbjct: 1248 TKIEKRQALTERFNTDPKIFLFILSTRSGGLGLNLT-GADTVIFYDTDWNPSMDAQAQDR 1306 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + G R V +Y LI ++I+E +L++ K + ++++ A Sbjct: 1307 C-----HRIGQTREVNIYRLITMHSIEENILKKSNQKRQLDNMVIKA 1348 >gi|302796603|ref|XP_002980063.1| hypothetical protein SELMODRAFT_177985 [Selaginella moellendorffii] gi|300152290|gb|EFJ18933.1| hypothetical protein SELMODRAFT_177985 [Selaginella moellendorffii] Length = 1274 Score = 100 bits (249), Expect = 1e-19, Method: Composition-based stats. Identities = 34/175 (19%), Positives = 66/175 (37%), Gaps = 20/175 (11%) Query: 43 DEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQ---------KAFPQG 91 D + K+ L+ + K A +++ F L L+ G Sbjct: 576 DAVQKTLVEASGKLLLLDKMTTKLKAEGHRVLIYSQFQRVLDILEDWLAYKNWNYERIDG 635 Query: 92 RTLDKDPCT-IQEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMI 148 + D + I +N KI + G G+NL + +V + W+ Q + Sbjct: 636 KVSGADRQSRIDRFNAPGSKIFCFLLSTRAGGLGINL-ATADTVVIYDSDWNPHADMQAM 694 Query: 149 ERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETI 203 R + G V +Y LI + TI+E ++Q + K ++ L++ +K + + Sbjct: 695 AR-----AHRMGQTSKVMIYRLITRGTIEERMMQLSKKKMVLEHLVVGRMKTQIL 744 >gi|291233872|ref|XP_002736874.1| PREDICTED: DNA repair and recombination protein RAD54-like [Saccoglossus kowalevskii] Length = 678 Score = 100 bits (249), Expect = 1e-19, Method: Composition-based stats. Identities = 31/166 (18%), Positives = 66/166 (39%), Gaps = 21/166 (12%) Query: 46 KHWKEVHDEKIKALEVIIE---KANAAPIIVAYHFNSDLARLQK----------AFPQGR 92 K + K++ L+ I+ ++ +++ ++ L +K Sbjct: 423 KGVQPELSGKMQVLDYILAVTRTTSSDKVVLVSNYTQTLDLFEKLCHNRGYLYVRLDGSM 482 Query: 93 TLDKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 ++ K ++ +N + + G GLNL G N LV F W+ Q + R Sbjct: 483 SIKKRAKMVERFNNPSSAEYIFMLSSKAGGCGLNL-IGANRLVMFDPDWNPANDDQAMAR 541 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + + G K+ ++Y L++ TI+E + QR K + +++ Sbjct: 542 VW-----RDGQKKQCYIYRLLSTGTIEEKIFQRQAHKKALSSCVVD 582 >gi|207345617|gb|EDZ72381.1| YFR038Wp-like protein [Saccharomyces cerevisiae AWRI1631] Length = 853 Score = 100 bits (249), Expect = 1e-19, Method: Composition-based stats. Identities = 30/162 (18%), Positives = 66/162 (40%), Gaps = 20/162 (12%) Query: 52 HDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQK---------AFPQGRTLDKDPCT 100 K++ L+ +I + +++ F + L ++ G ++ Sbjct: 601 TSGKLQILQKLIPPLISEGHKVLIYSQFVNMLDLIEDWCDLNSFATFRIDGSVSNETRKD 660 Query: 101 -IQEWNE--GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 ++++N K + + G G+NL G + +V F W+ + Q ++R Sbjct: 661 QLEKFNSSKDKHNIFLLSTRAAGLGINL-VGADTVVLFDSDWNPQVDLQAMDRC-----H 714 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 + G + V VY L NTI+ ++L R K ++ +++ K Sbjct: 715 RIGQESPVIVYRLCCDNTIEHVILTRAANKRNLERMVIQMGK 756 >gi|325091990|gb|EGC45300.1| DNA repair and recombination protein RAD26 [Ajellomyces capsulatus H88] Length = 1092 Score = 100 bits (249), Expect = 1e-19, Method: Composition-based stats. Identities = 29/163 (17%), Positives = 59/163 (36%), Gaps = 20/163 (12%) Query: 53 DEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQ-----------KAFPQGRTLDKDPC 99 K++ ++ ++E + ++ L L+ + + Sbjct: 591 SGKMQVVKSLLELWRDTGHKTLLFAQHRIMLDILERFIISMGGFKYQRMDGNTPIKFRQK 650 Query: 100 TIQEWNE-GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQ 158 + E+N I + G G+NL G + ++ + W+ Q ER + Sbjct: 651 MVDEFNNNPDIHVFLLTTKVGGLGVNLT-GADRVIIYDPDWNPSTDVQARERAW-----R 704 Query: 159 AGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 G KR V +Y L+ TI+E + R K + + +L K+ Sbjct: 705 LGQKREVTIYRLMTAGTIEEKIYHRQIFKQFLTNKILKDPKQR 747 >gi|145349626|ref|XP_001419229.1| predicted protein [Ostreococcus lucimarinus CCE9901] gi|144579460|gb|ABO97522.1| predicted protein [Ostreococcus lucimarinus CCE9901] Length = 983 Score = 100 bits (249), Expect = 1e-19, Method: Composition-based stats. Identities = 35/160 (21%), Positives = 68/160 (42%), Gaps = 21/160 (13%) Query: 50 EVHDEKIKALEVIIE---KANAAPIIVAYHFNSDLARL-----QKAFPQGRT-----LDK 96 E H K L ++ I++ ++ L + ++ +P R + K Sbjct: 529 EEHSGKFAVLARLLANLRAETKDRIVIISNYTQTLDLVGNMCRERNYPFVRLDGSTSIGK 588 Query: 97 DPCTIQEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 ++++N+ + + G G+NL GGN LV F W+ +Q R Sbjct: 589 RQKLVKQFNDPTSNSFVFLLSSKAGGCGINL-IGGNRLVLFDPDWNPANDKQAAARCW-- 645 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 + G K+ ++Y +A TI+E V QR +K ++Q+++ Sbjct: 646 ---RDGQKKKCYLYRFLAAGTIEEKVFQRQLSKESLQNVV 682 >gi|134077641|emb|CAK45712.1| unnamed protein product [Aspergillus niger] Length = 716 Score = 100 bits (249), Expect = 1e-19, Method: Composition-based stats. Identities = 28/167 (16%), Positives = 66/167 (39%), Gaps = 23/167 (13%) Query: 45 EKHWKEVHDEKIKALEVIIE----KANAAPIIVAYHFNSDLARL-----QKAFPQGR--- 92 EK W + KI+ I+ + I+ F S L L ++ + R Sbjct: 496 EKTW--MSSAKIEKAMEILRDVYHREGNEKTIIFSQFTSLLDLLEIPIARQGWDYRRYDG 553 Query: 93 ---TLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIE 149 D++ + + ++ + GLNL + ++ F +W+ +Q ++ Sbjct: 554 SMRPADRNTSVMDFTDNEDCRIMLVSLKAGNAGLNL-VAASQVIIFDPFWNPYVEEQAVD 612 Query: 150 RIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 R + G R V ++ ++ ++T+++ +L+ K + + L+ Sbjct: 613 R-----AHRIGQVRPVQIHRIVVKDTVEDRILELQDKKRELVEGALD 654 >gi|40254124|ref|NP_444354.2| SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 [Mus musculus] gi|55977469|sp|Q91ZW3|SMCA5_MOUSE RecName: Full=SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5; AltName: Full=Sucrose nonfermenting protein 2 homolog; Short=mSnf2h gi|16551316|gb|AAL25793.1|AF375046_1 ATP-dependent chromatin remodeling protein SNF2H [Mus musculus] gi|31419851|gb|AAH53069.1| SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5 [Mus musculus] Length = 1051 Score = 100 bits (249), Expect = 1e-19, Method: Composition-based stats. Identities = 42/230 (18%), Positives = 86/230 (37%), Gaps = 40/230 (17%) Query: 1 MKQY---HKFQRELYCDLQGENIEAFNSASKTVK------CLQL--ANGAVYYDEEKHW- 48 +K Y K QRE Y + ++I+ NSA K K +QL Y + Sbjct: 409 VKIYVGLSKMQREWYTRILMKDIDILNSAGKMDKMRLLNILMQLRKCCNHPYLFDGAEPG 468 Query: 49 --------KEVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQ---------KAFP 89 + K+ L+ ++ K + +++ L L+ Sbjct: 469 PPYTTDMHLVTNSGKMVVLDKLLPKLKEQGSRVLIFSQMTRVLDILEDYCMWRNYEYCRL 528 Query: 90 QGRTLDKDPCT-IQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 G+T + I +NE + + G G+NL ++++ + W+ + Q Sbjct: 529 DGQTPHDERQDSINAYNEPNSTKFVFMLSTRAGGLGINL-ATADVVILYDSDWNPQVDLQ 587 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 ++R + G + V V+ I NT++E +++R K + +++ Sbjct: 588 AMDR-----AHRIGQTKTVRVFRFITDNTVEERIVERAEMKLRLDSIVIQ 632 >gi|328861599|gb|EGG10702.1| hypothetical protein MELLADRAFT_22404 [Melampsora larici-populina 98AG31] Length = 1154 Score = 100 bits (249), Expect = 1e-19, Method: Composition-based stats. Identities = 29/163 (17%), Positives = 65/163 (39%), Gaps = 20/163 (12%) Query: 50 EVHDEKIKALEVIIEK--ANAAPIIVAYH----------FNSDLARLQKAFPQGRTLDKD 97 V+ K+ L+ ++ + A +++ + S + + ++ Sbjct: 463 VVNSGKMILLDKLLTRLKAEGHRVLIFSQMVRMLDIMSDYMSLRGYIFQRLDGTVASEER 522 Query: 98 PCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTR 155 I +N P + G G+NL + ++ F W+ + Q + R Sbjct: 523 RKAIGHFNAPDSPDFAFLLSTRAGGLGINL-ETADTVIIFDSDWNPQNDLQAMAR----- 576 Query: 156 QRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNAL 198 + G K V VY L+ ++T++E VL+R + K ++ ++N + Sbjct: 577 AHRIGQKNHVNVYRLVTKDTVEEDVLERAKRKMILEYAIINQM 619 >gi|168025225|ref|XP_001765135.1| SNF2 family DNA-dependent ATPase [Physcomitrella patens subsp. patens] gi|162683722|gb|EDQ70130.1| SNF2 family DNA-dependent ATPase [Physcomitrella patens subsp. patens] Length = 793 Score = 100 bits (249), Expect = 1e-19, Method: Composition-based stats. Identities = 29/162 (17%), Positives = 53/162 (32%), Gaps = 23/162 (14%) Query: 52 HDEKIKALEVIIEKANAA----PIIVAYHFNSDLARLQK----------AFPQGRTLDKD 97 K+ AL ++ A +V F+ L L+ T K Sbjct: 617 SSAKVDALINLLVAAREKDPTEKSVVFSQFSQMLNCLEGPLADVGFRFVRLDGSMTSKKR 676 Query: 98 PCTIQEWNEGKIP---LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 + + + + G GLNL + + WW+ +Q ++R+ Sbjct: 677 QAALTAFRSKDPDSPTIFLLSLKAAGVGLNL-VAASRVYMVDPWWNPAVEEQAMDRV--- 732 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + G R V V LI +TI++ +L+ K + Sbjct: 733 --HRLGQTRDVTVVRLIVTDTIEDRILELQERKRELATSAFE 772 >gi|38233618|ref|NP_939385.1| SNF2/RAD54 family protein [Corynebacterium diphtheriae NCTC 13129] gi|38199878|emb|CAE49544.1| SNF2/RAD54 family protein [Corynebacterium diphtheriae] Length = 1029 Score = 100 bits (249), Expect = 1e-19, Method: Composition-based stats. Identities = 32/189 (16%), Positives = 67/189 (35%), Gaps = 24/189 (12%) Query: 26 ASKTVKCLQLANGAVYYDEEKHWKEVH----DEKIKALEVIIEKA--NAAPIIVAYHFNS 79 S K Q+ N ++ + + K+ L +I A + +++ + + Sbjct: 823 LSALTKIKQICNHPAHFLGDGSAMTIKGKHRSGKVAELMNLINDAVDSDQKLLIFTQYRA 882 Query: 80 DLARLQKAFPQ-----------GRTLDKDPCTIQEWNEGK-IPLLFAHPASCGHGLNLQY 127 L G + ++E+ P + + G GLNL Sbjct: 883 FGDLLVPYLSDYFGTTIPFLHGGVSKTGRDRMVEEFQTPDGPPAMILSLKAGGTGLNLTN 942 Query: 128 GGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTK 187 +I+V WW+ Q +R + G ++ V VY +I T++E + L K Sbjct: 943 -ASIVVHMDRWWNPAVENQATDR-----AFRIGQRKDVTVYKMITAGTLEESIQDILDGK 996 Query: 188 STIQDLLLN 196 + + +++ Sbjct: 997 TQLASAVVS 1005 >gi|255072671|ref|XP_002500010.1| SNF2 super family [Micromonas sp. RCC299] gi|226515272|gb|ACO61268.1| SNF2 super family [Micromonas sp. RCC299] Length = 800 Score = 100 bits (249), Expect = 1e-19, Method: Composition-based stats. Identities = 36/171 (21%), Positives = 64/171 (37%), Gaps = 23/171 (13%) Query: 41 YYDEEKHWKEVHDE----KIKALEVIIEKANAA--PIIVAYHFNSDLARLQKA------- 87 Y D HDE K+ L +++ ++ + S L + +A Sbjct: 633 YPDPSDPRVPAHDEAMSGKLAVLIRMLQGMRRGIDKTVIVSGYTSTLDIIAEACLVMGGK 692 Query: 88 ---FPQGRTLDKDPCTIQEWNEGKI-PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEE 143 ++ + +N G+ + + G GLNL G N LV F W+ Sbjct: 693 VSRLDGSVPPNQRVPLVNSFNAGRGGDVFLLSTKAGGVGLNL-VGANRLVLFDSDWNPAN 751 Query: 144 HQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 Q + R+ + G KR V +Y L++ T++E + QR K + + Sbjct: 752 DLQALARVW-----RDGQKRPVTIYRLVSTGTVEEKIFQRQMLKGDVASCM 797 >gi|47217344|emb|CAG11049.1| unnamed protein product [Tetraodon nigroviridis] Length = 985 Score = 100 bits (249), Expect = 1e-19, Method: Composition-based stats. Identities = 43/230 (18%), Positives = 91/230 (39%), Gaps = 40/230 (17%) Query: 1 MKQY---HKFQRELYCDLQGENIEAFNSASKTVK------CLQL--ANGAVYYDEEKHW- 48 +K Y K QRE Y + ++I+ NSA K K +QL Y + Sbjct: 342 IKIYVGLSKMQREWYTKILMKDIDILNSAGKMDKMRLLNILMQLRKCCNHPYLFDGAEPG 401 Query: 49 --------KEVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQ---------KAFP 89 V+ K+ L+ ++ K + +++ L L+ Sbjct: 402 PPYTTDLHLVVNSGKMVVLDKLLPKLKEQGSRVLIFSQMTRVLDILEDYCMWRNYGYCRL 461 Query: 90 QGRTLDKDPC-TIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 G+T ++ +I +NE + + G G+NL ++++ + W+ + Q Sbjct: 462 DGQTPHEERQISINAFNEPNSSKFIFMLSTRAGGLGINL-ATADVVILYDSDWNPQVDLQ 520 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 ++R + G ++ V V+ I +NT++E +++R K + +++ Sbjct: 521 AMDR-----AHRIGQQKQVRVFRYITENTVEERIVERAEMKLRLDSIVIQ 565 >gi|218191385|gb|EEC73812.1| hypothetical protein OsI_08529 [Oryza sativa Indica Group] Length = 1765 Score = 100 bits (249), Expect = 1e-19, Method: Composition-based stats. Identities = 34/143 (23%), Positives = 62/143 (43%), Gaps = 17/143 (11%) Query: 65 KANAAPIIVAYHFNSDLARLQKAF---------PQGRTLDKDPCTI-QEWN-EGKIPLLF 113 K+ ++ L L++ G T ++ T+ Q +N K L Sbjct: 813 KSEGHRALIFTQMTKMLDILEEFINLYGYTYLRLDGSTQPEERQTLMQRFNTNPKFFLFI 872 Query: 114 AHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQ 173 S G G+NL G + ++F+ W+ QQ +R + G R V +Y LI++ Sbjct: 873 LSTRSGGVGINL-VGADTVIFYDSDWNPAMDQQAQDRC-----HRIGQTREVHIYRLISE 926 Query: 174 NTIDELVLQRLRTKSTIQDLLLN 196 +TI+E +L++ K + DL++ Sbjct: 927 STIEENILKKANQKRALDDLVIQ 949 >gi|115457136|ref|NP_001052168.1| Os04g0177300 [Oryza sativa Japonica Group] gi|113563739|dbj|BAF14082.1| Os04g0177300 [Oryza sativa Japonica Group] Length = 664 Score = 100 bits (249), Expect = 1e-19, Method: Composition-based stats. Identities = 45/189 (23%), Positives = 67/189 (35%), Gaps = 27/189 (14%) Query: 13 CDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAA--P 70 C L I + +C D E +WK K+ L I+E Sbjct: 465 CPLCRSPITKSELITLPSQCR------FQVDPENNWK--DSCKVIKLIKILEGLQEKREK 516 Query: 71 IIVAYHFNSDLARLQKAFPQGRTL----------DKDPCTIQEWNEGKIP-LLFAHPASC 119 IV F S L+ F Q ++E++E K +L + Sbjct: 517 SIVFSQFTSFFDLLEVPFNQKGIKFLRFDGKLSQKHREKVLKEFSESKDKLVLLMSLKAG 576 Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 G GLNL N + WW+ +Q I RI + G KRAV V I ++T++E Sbjct: 577 GVGLNLTAASN-VFLMDPWWNPAVEEQAIMRI-----HRIGQKRAVQVRRFIVKDTVEER 630 Query: 180 VLQRLRTKS 188 + + K Sbjct: 631 MQKVQACKQ 639 >gi|325651836|ref|NP_003592.3| SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 [Homo sapiens] gi|57014128|sp|O60264|SMCA5_HUMAN RecName: Full=SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5; Short=SWI/SNF-related matrix-associated actin-dependent regulator of chromatin A5; AltName: Full=Sucrose nonfermenting protein 2 homolog; Short=hSNF2H gi|2967452|dbj|BAA25173.1| hSNF2H [Homo sapiens] gi|18606276|gb|AAH23144.1| SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5 [Homo sapiens] gi|119625476|gb|EAX05071.1| SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5 [Homo sapiens] gi|168275690|dbj|BAG10565.1| SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 [synthetic construct] gi|325463895|gb|ADZ15718.1| SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5 [synthetic construct] Length = 1052 Score = 100 bits (249), Expect = 1e-19, Method: Composition-based stats. Identities = 42/230 (18%), Positives = 86/230 (37%), Gaps = 40/230 (17%) Query: 1 MKQY---HKFQRELYCDLQGENIEAFNSASKTVK------CLQL--ANGAVYYDEEKHW- 48 +K Y K QRE Y + ++I+ NSA K K +QL Y + Sbjct: 410 VKIYVGLSKMQREWYTRILMKDIDILNSAGKMDKMRLLNILMQLRKCCNHPYLFDGAEPG 469 Query: 49 --------KEVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQ---------KAFP 89 + K+ L+ ++ K + +++ L L+ Sbjct: 470 PPYTTDMHLVTNSGKMVVLDKLLPKLKEQGSRVLIFSQMTRVLDILEDYCMWRNYEYCRL 529 Query: 90 QGRTLDKDPCT-IQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 G+T + I +NE + + G G+NL ++++ + W+ + Q Sbjct: 530 DGQTPHDERQDSINAYNEPNSTKFVFMLSTRAGGLGINL-ATADVVILYDSDWNPQVDLQ 588 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 ++R + G + V V+ I NT++E +++R K + +++ Sbjct: 589 AMDR-----AHRIGQTKTVRVFRFITDNTVEERIVERAEMKLRLDSIVIQ 633 >gi|242795848|ref|XP_002482676.1| DNA repair protein Rhp26/Rad26, putative [Talaromyces stipitatus ATCC 10500] gi|218719264|gb|EED18684.1| DNA repair protein Rhp26/Rad26, putative [Talaromyces stipitatus ATCC 10500] Length = 1210 Score = 100 bits (249), Expect = 1e-19, Method: Composition-based stats. Identities = 37/187 (19%), Positives = 66/187 (35%), Gaps = 28/187 (14%) Query: 29 TVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQK 86 T K G Y D K K++ ++ ++E K ++ L L+K Sbjct: 746 THKLFSTTTG--YGDASK------SGKMQVVKALLELWKDTGHKTLLFAQHRIMLNILEK 797 Query: 87 -----------AFPQGRTLDKDPCTIQEWNE-GKIPLLFAHPASCGHGLNLQYGGNILVF 134 + + + E+N I + G G+NL G + ++ Sbjct: 798 FVNTLSGFNYRRMDGDTPIHRRQLLVDEFNNSPDIHVFLLTTKVGGLGVNLT-GADRVII 856 Query: 135 FSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 + W+ Q ER + G KR V +Y L+ TI+E + R K + + + Sbjct: 857 YDPDWNPSTDMQARERAW-----RLGQKREVTIYRLMTAGTIEEKIYHRQIFKQFLTNKV 911 Query: 195 LNALKKE 201 L K+ Sbjct: 912 LKDPKQR 918 >gi|218197711|gb|EEC80138.1| hypothetical protein OsI_21929 [Oryza sativa Indica Group] gi|222635083|gb|EEE65215.1| hypothetical protein OsJ_20361 [Oryza sativa Japonica Group] Length = 1309 Score = 100 bits (249), Expect = 1e-19, Method: Composition-based stats. Identities = 38/224 (16%), Positives = 77/224 (34%), Gaps = 37/224 (16%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE- 60 K Y R G ++ N ++ +L A DE + + + LE Sbjct: 504 KNYEVLTRR-----SGGHVSLINV---VMELRKLCCHAFMTDEPEEPANSEEALRRLLES 555 Query: 61 ----VIIEKA------NAAPIIVAYHFNSDLARLQKAF---------PQGRTLDKDPCT- 100 +++K +++ F L L+ G+ + Sbjct: 556 SGKMELLDKMMVKLKEQGHRVLIYSQFQHMLDLLEDYLSYRKWSYERIDGKIGGAERQIR 615 Query: 101 IQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQ 158 I +N + G G+NL + ++ + W+ Q + R + Sbjct: 616 IDRFNAKNSTRFCFLLSTRAGGLGINL-ATADTVIIYDSDWNPHADLQAMAR-----AHR 669 Query: 159 AGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKET 202 G V +Y L+++ TI+E ++Q + K ++ L++ L K T Sbjct: 670 LGQTSKVMIYRLVSRGTIEERMMQLTKKKMVLEHLVVGRLTKGT 713 >gi|225555676|gb|EEH03967.1| DNA dependent ATPase [Ajellomyces capsulatus G186AR] Length = 1276 Score = 100 bits (249), Expect = 1e-19, Method: Composition-based stats. Identities = 29/163 (17%), Positives = 59/163 (36%), Gaps = 20/163 (12%) Query: 53 DEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQ-----------KAFPQGRTLDKDPC 99 K++ ++ ++E + ++ L L+ + + Sbjct: 770 SGKMQVVKSLLELWRDTGHKTLLFAQHRIMLDILERFIISMGGFKYQRMDGNTPIKFRQK 829 Query: 100 TIQEWNE-GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQ 158 + E+N I + G G+NL G + ++ + W+ Q ER + Sbjct: 830 MVDEFNNNPDIHVFLLTTKVGGLGVNLT-GADRVIIYDPDWNPSTDVQARERAW-----R 883 Query: 159 AGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 G KR V +Y L+ TI+E + R K + + +L K+ Sbjct: 884 LGQKREVTIYRLMTAGTIEEKIYHRQIFKQFLTNKILKDPKQR 926 >gi|145245695|ref|XP_001395110.1| helicase swr1 [Aspergillus niger CBS 513.88] gi|134079817|emb|CAK40951.1| unnamed protein product [Aspergillus niger] Length = 1711 Score = 100 bits (249), Expect = 1e-19, Method: Composition-based stats. Identities = 30/166 (18%), Positives = 67/166 (40%), Gaps = 19/166 (11%) Query: 44 EEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAF---------PQGR 92 +K + K++ L+ ++ A ++ L L++ G Sbjct: 1377 PDKRLLQYDCGKLQRLDKLLRDLKAGGHRALIFTQMTKMLDILEQFLNIHGHRYLRLDGT 1436 Query: 93 TLDKDPCTI--QEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 T + + + N+ +I S G G+NL G + ++F+ L W+ +Q +R Sbjct: 1437 TKVEQRQILTDRFNNDNRILAFILSSRSGGLGINLT-GADTVIFYDLDWNPAMDKQCQDR 1495 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + G R V +Y +++ TI+ +L++ K + D+++ Sbjct: 1496 C-----HRIGQTRDVHIYRFVSEYTIESNILRKANQKRMLDDVVIQ 1536 >gi|121700232|ref|XP_001268381.1| SWI/SNF family DNA-dependent ATPase Ris1, putative [Aspergillus clavatus NRRL 1] gi|119396523|gb|EAW06955.1| SWI/SNF family DNA-dependent ATPase Ris1, putative [Aspergillus clavatus NRRL 1] Length = 1253 Score = 100 bits (249), Expect = 1e-19, Method: Composition-based stats. Identities = 31/170 (18%), Positives = 72/170 (42%), Gaps = 21/170 (12%) Query: 45 EKHWKEVH--DEKIKALEVIIEKANAAPIIVAYHFNSDLARLQ----------KAFPQG- 91 EK W ++ ++ L+ I + ++ I+ F S L L+ + + Sbjct: 1073 EKTWVTSAKIEKTLEILQEIGNRDDSEKTIIFSQFTSLLDLLEVPIARRGWGYRRYDGSM 1132 Query: 92 RTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERI 151 + D++ + + ++ + GLNL + ++ F +W+ +Q I+R Sbjct: 1133 KPADRNSAVLDFTDNADCKIMLVSLKAGNSGLNL-VAASQVIIFDPFWNPYIEEQAIDR- 1190 Query: 152 GVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN--ALK 199 + G +R V ++ ++ Q T+++ +L+ K + + L+ ALK Sbjct: 1191 ----AHRIGQRREVQIHRVLVQKTVEDRILELQDKKRELIEGALDEKALK 1236 >gi|328861412|gb|EGG10515.1| hypothetical protein MELLADRAFT_47048 [Melampsora larici-populina 98AG31] Length = 676 Score = 100 bits (249), Expect = 1e-19, Method: Composition-based stats. Identities = 34/153 (22%), Positives = 63/153 (41%), Gaps = 19/153 (12%) Query: 55 KIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTL-----------DKDPCTI 101 KI+ L+ ++ + + + I++ F LA L+K D+ P Sbjct: 480 KIEKLKELVIRLKSKGSRILIFSQFTQMLAILEKVMECIGVKFLILTGSTSVGDRQPLVD 539 Query: 102 QEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGF 161 + N+ I + + G GLNL + +V F ++ +R R + G Sbjct: 540 EFTNDESITVFLLSTKAGGLGLNL-MAADTVVIFDQDFNPH-----NDRQAEDRAYRLGQ 593 Query: 162 KRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 KR V V + ++TI+E +LQ +TK + + Sbjct: 594 KRDVHVIKFVTKHTIEEDILQLAQTKIALDTSV 626 >gi|300123117|emb|CBK24124.2| unnamed protein product [Blastocystis hominis] Length = 1117 Score = 100 bits (249), Expect = 1e-19, Method: Composition-based stats. Identities = 22/103 (21%), Positives = 41/103 (39%), Gaps = 6/103 (5%) Query: 95 DKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 D I +N GK+ + G GLNL + ++ F W+ + Q R Sbjct: 445 DLRQQKIDRFNSGKVFAFLLSTKAGGLGLNLT-AADTVIIFDNDWNPQNDVQAEAR---- 499 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + G ++ V V+ L+ + T +E + R K + + + Sbjct: 500 -AHRIGQQKPVQVFRLVTKGTYEEDLFSRASKKLGLSQAVFES 541 >gi|195154762|ref|XP_002018288.1| GL16841 [Drosophila persimilis] gi|194114084|gb|EDW36127.1| GL16841 [Drosophila persimilis] Length = 2139 Score = 100 bits (249), Expect = 1e-19, Method: Composition-based stats. Identities = 29/156 (18%), Positives = 63/156 (40%), Gaps = 19/156 (12%) Query: 55 KIKALEVIIEKA--NAAPIIVAYHFNSDLARLQ---------KAFPQGRTLDKDPCTI-Q 102 K++ L+ ++ + + +++ L L+ G T + + + Sbjct: 594 KLQTLDRLLRQLKVDGHRVLIFTQMTKMLDVLEAFLNHHGHIYLRLDGSTRVEQRQILME 653 Query: 103 EWNEGK-IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGF 161 +N K I S G G+NL G + ++F+ W+ Q +R + G Sbjct: 654 RFNGDKRIFCFILSTRSGGVGINLT-GADTVIFYDSDWNPTMDAQAQDRC-----HRIGQ 707 Query: 162 KRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 R V +Y L+++ TI+ +L++ K + D+ + Sbjct: 708 TRDVHIYRLVSEKTIEVNILKKANQKRMLSDMAIEG 743 >gi|310639769|ref|YP_003944527.1| snf2-like protein [Paenibacillus polymyxa SC2] gi|309244719|gb|ADO54286.1| SNF2-like protein [Paenibacillus polymyxa SC2] Length = 987 Score = 100 bits (249), Expect = 1e-19, Method: Composition-based stats. Identities = 37/233 (15%), Positives = 78/233 (33%), Gaps = 41/233 (17%) Query: 2 KQYHKFQRELYCDLQG-ENIEAFNS-ASKTVKCLQLANGAV--------------YYDEE 45 Y + +EL +Q E IE + S + QL + Y + Sbjct: 739 ALYDQIVKELMERMQKLEGIERKGAILSALTQLKQLCDHPALLTKGALLDAAASGYSQPD 798 Query: 46 KHWKEVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQKAFPQ-----------GR 92 K++ + ++++ ++ + LQ+ Q Sbjct: 799 LEAVISRSSKLERILAMVKELREEGERCLIFTQYIGMGQMLQQVLAQELQEPVLYLNGST 858 Query: 93 TLDKDPCTIQEWNE-----GKIP-LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 + I ++ + P + + G GLNL N + F WW+ Q Sbjct: 859 SKSARDRMIDQFQSHTLSPDEQPSVFILSLKAGGVGLNLT-AANHVFHFDRWWNPAVENQ 917 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 +R + G + V V+ I+ T++E + + L +K + D ++ + + Sbjct: 918 ATDR-----AYRMGQTKDVQVHKFISLGTLEERIDEMLESKQQLSDQIITSTE 965 >gi|209945942|gb|ACI97202.1| okra [Drosophila simulans] Length = 168 Score = 100 bits (249), Expect = 1e-19, Method: Composition-based stats. Identities = 30/143 (20%), Positives = 59/143 (41%), Gaps = 19/143 (13%) Query: 58 ALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGR----------TLDKDPCTIQEWNEG 107 L I + N +++ ++ L ++ + + ++ K + +N+ Sbjct: 33 MLAAIRAEGNDKVVLI-SNYTQTLDLFEQLARKRKYGFVRLDGTMSIKKRSKVVDRFNDP 91 Query: 108 KIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 + L + G GLNL G N L F W+ +Q + R+ + G K+ Sbjct: 92 ESESFLFMLSSKAGGCGLNL-IGANRLFMFDPDWNPANDEQAMARVW-----RDGQKKPC 145 Query: 166 FVYYLIAQNTIDELVLQRLRTKS 188 ++Y L+A +I+E +LQR K Sbjct: 146 YIYRLVASGSIEEKILQRQTHKK 168 >gi|49389246|dbj|BAD25208.1| putative SNF2 domain-containing protein [Oryza sativa Japonica Group] Length = 2057 Score = 100 bits (249), Expect = 1e-19, Method: Composition-based stats. Identities = 44/258 (17%), Positives = 92/258 (35%), Gaps = 67/258 (25%) Query: 1 MKQYHKF-----QRELYCDLQGENIEAFNSASKTVK--------CLQLANGAVYYDEEKH 47 +K Y KF ++E+ ++ ++ S K + L+L + + E Sbjct: 1725 LKLYDKFSNSNAKQEISTIVKENELDQSTSQPKATRHVFQALQYLLKLCSHPLLVTGESP 1784 Query: 48 WKEV-------------------HDEKIKALEVIIEK---------------ANAAPIIV 73 + H K+ AL+ I+++ +++ Sbjct: 1785 PDYLVDLLKEIGMGTGDELHDLHHSPKLVALQEILQECGIGSEISSPDASAAIGQHRVLI 1844 Query: 74 AYHFNSDLARLQK-------------AFPQGRTLDKDPCTIQEWN-EGKIPLLFAHPASC 119 + L ++K +K ++ +N + I +L Sbjct: 1845 FAQHKALLDIIEKDLFQSHMRSVTYLRLDGSVEPEKRFEIVKAFNSDPTIDVLLLTTHVG 1904 Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 G GLNL + LVF W+ + Q ++R + G ++ V V+ LI + T++E Sbjct: 1905 GLGLNLT-SADTLVFMEHDWNPMKDLQAMDR-----AHRLGQRKVVNVHRLIMRGTLEEK 1958 Query: 180 VLQRLRTKSTIQDLLLNA 197 V+ R K ++ + ++NA Sbjct: 1959 VMSLQRFKVSVANAVINA 1976 >gi|114596221|ref|XP_517459.2| PREDICTED: SWI/SNF-related matrix-associated actin-dependent regulator of chromatin a5 isoform 5 [Pan troglodytes] gi|114596223|ref|XP_001144488.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent regulator of chromatin a5 isoform 4 [Pan troglodytes] Length = 1052 Score = 100 bits (249), Expect = 1e-19, Method: Composition-based stats. Identities = 42/230 (18%), Positives = 86/230 (37%), Gaps = 40/230 (17%) Query: 1 MKQY---HKFQRELYCDLQGENIEAFNSASKTVK------CLQL--ANGAVYYDEEKHW- 48 +K Y K QRE Y + ++I+ NSA K K +QL Y + Sbjct: 410 VKIYVGLSKMQREWYTRILMKDIDILNSAGKMDKMRLLNILMQLRKCCNHPYLFDGAEPG 469 Query: 49 --------KEVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQ---------KAFP 89 + K+ L+ ++ K + +++ L L+ Sbjct: 470 PPYTTDMHLVTNSGKMVVLDKLLPKLKEQGSRVLIFSQMTRVLDILEDYCMWRNYEYCRL 529 Query: 90 QGRTLDKDPCT-IQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 G+T + I +NE + + G G+NL ++++ + W+ + Q Sbjct: 530 DGQTPHDERQDSINAYNEPNSTKFVFMLSTRAGGLGINL-ATADVVILYDSDWNPQVDLQ 588 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 ++R + G + V V+ I NT++E +++R K + +++ Sbjct: 589 AMDR-----AHRIGQTKTVRVFRFITDNTVEERIVERAEMKLRLDSIVIQ 633 >gi|322791142|gb|EFZ15704.1| hypothetical protein SINV_11452 [Solenopsis invicta] Length = 843 Score = 100 bits (249), Expect = 1e-19, Method: Composition-based stats. Identities = 37/181 (20%), Positives = 73/181 (40%), Gaps = 17/181 (9%) Query: 27 SKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHF-NSDLARLQ 85 + + D + ++ L ++K + ++V+Y+ DL + Sbjct: 554 VLYNALSKTCMSQIKQDNNFNEYCGKVTILQTLLRNLKKTDEKLVLVSYYTQTLDLLEII 613 Query: 86 KAFPQGRTLDKDPCT--------IQEWNE--GKIPLLFAHPASCGHGLNLQYGGNILVFF 135 + + L D T +++N +L + G GLNL G + LV F Sbjct: 614 CDMEKLKFLRLDGSTPSSVRLKITEQFNTRTDNSKVLLLSAKAGGVGLNL-PGASRLVLF 672 Query: 136 SLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 W+ Q + RI + G KR V++Y L+ TI+E + QR +K+ + + ++ Sbjct: 673 DSDWNPASDMQAMARIW-----RDGQKRNVYIYRLLTTGTIEEKIYQRQISKANLSESVV 727 Query: 196 N 196 + Sbjct: 728 D 728 >gi|296195484|ref|XP_002745366.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 isoform 1 [Callithrix jacchus] Length = 1052 Score = 100 bits (249), Expect = 1e-19, Method: Composition-based stats. Identities = 42/230 (18%), Positives = 86/230 (37%), Gaps = 40/230 (17%) Query: 1 MKQY---HKFQRELYCDLQGENIEAFNSASKTVK------CLQL--ANGAVYYDEEKHW- 48 +K Y K QRE Y + ++I+ NSA K K +QL Y + Sbjct: 410 VKIYVGLSKMQREWYTRILMKDIDILNSAGKMDKMRLLNILMQLRKCCNHPYLFDGAEPG 469 Query: 49 --------KEVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQ---------KAFP 89 + K+ L+ ++ K + +++ L L+ Sbjct: 470 PPYTTDMHLVTNSGKMVVLDKLLPKLKEQGSRVLIFSQMTRVLDILEDYCMWRNYEYCRL 529 Query: 90 QGRTLDKDPCT-IQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 G+T + I +NE + + G G+NL ++++ + W+ + Q Sbjct: 530 DGQTPHDERQDSINAYNEPNSTKFVFMLSTRAGGLGINL-ATADVVILYDSDWNPQVDLQ 588 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 ++R + G + V V+ I NT++E +++R K + +++ Sbjct: 589 AMDR-----AHRIGQTKTVRVFRFITDNTVEERIVERAEMKLRLDSIVIQ 633 >gi|224098058|ref|XP_002192409.1| PREDICTED: SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1 [Taeniopygia guttata] Length = 1189 Score = 100 bits (249), Expect = 1e-19, Method: Composition-based stats. Identities = 44/242 (18%), Positives = 89/242 (36%), Gaps = 52/242 (21%) Query: 1 MKQY---HKFQRELYCDLQGENIEAFNSASKTVK------CLQL---ANGAVYYD----- 43 +K Y K QRE Y + ++I+ NSA K K +QL N +D Sbjct: 532 VKIYLGLSKMQREWYTRILMKDIDILNSAGKMDKMRLLNILMQLRKCCNHPYLFDGAEPG 591 Query: 44 ---EEKHWKEVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQ---------KAFP 89 + K+ L+ ++ K + +++ L L+ Sbjct: 592 PPYTTDTHLITNSGKMLVLDKLLAKLREQGSRVLLFSQMTRLLDILEDYCMWRGYEYCRL 651 Query: 90 QGRTLDKD-------------PCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVF 134 G+T ++ I +N + + G G+NL ++++ Sbjct: 652 DGQTPHEEREVGKLYVNKKSLSEAIDTFNAPNSSKFIFMLSTRAGGLGINL-ATADVVIL 710 Query: 135 FSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 + W+ + Q ++R + G K+ V V+ LI NT++E +++R K + ++ Sbjct: 711 YDSDWNPQVDLQAMDR-----AHRIGQKKPVRVFRLITDNTVEERIVERAEIKLRLDSIV 765 Query: 195 LN 196 + Sbjct: 766 IQ 767 >gi|321259505|ref|XP_003194473.1| helicase [Cryptococcus gattii WM276] gi|317460944|gb|ADV22686.1| Helicase, putative [Cryptococcus gattii WM276] Length = 1848 Score = 100 bits (249), Expect = 1e-19, Method: Composition-based stats. Identities = 46/246 (18%), Positives = 87/246 (35%), Gaps = 60/246 (24%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASK---------TVKCLQLANGA--VYYDEEKHWKE 50 + Y +F R + G IE ASK +L N V E + +KE Sbjct: 1543 QLYDEFSRSKAAEEAGMEIEKP--ASKEGQGHVFQSLQYLRKLCNHPALVLDGEPQRFKE 1600 Query: 51 VHDE--------------KIKALEVII-------------EKANAAPIIVAYHFNSDLAR 83 + + K++AL ++ + +++ L Sbjct: 1601 IQKKIGGGPGLHDLSHAPKMEALRQLLQDCGIGLPPDKLADDVTTHRVLIFCQLRPMLDI 1660 Query: 84 LQK-------------AFPQGRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGG 129 ++K K +Q +N + +I +L + G GLNL G Sbjct: 1661 IEKDLFGTHMPTVSYMRLDGSTDPRKRHAIVQTFNADPRIDVLLLTTSVGGLGLNLT-GA 1719 Query: 130 NILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKST 189 + ++F W+ + Q ++R + G ++ V VY LI + T++E ++ R K Sbjct: 1720 DTVIFVDHDWNPMKDLQAMDR-----AHRLGQRKVVNVYRLITRGTLEEKIMGLQRFKLN 1774 Query: 190 IQDLLL 195 I ++ Sbjct: 1775 IASSVV 1780 >gi|157817975|ref|NP_001100889.1| SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 [Rattus norvegicus] gi|149037939|gb|EDL92299.1| SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5 (predicted), isoform CRA_a [Rattus norvegicus] Length = 995 Score = 100 bits (249), Expect = 1e-19, Method: Composition-based stats. Identities = 42/230 (18%), Positives = 86/230 (37%), Gaps = 40/230 (17%) Query: 1 MKQY---HKFQRELYCDLQGENIEAFNSASKTVK------CLQL--ANGAVYYDEEKHW- 48 +K Y K QRE Y + ++I+ NSA K K +QL Y + Sbjct: 353 VKIYVGLSKMQREWYTRILMKDIDILNSAGKMDKMRLLNILMQLRKCCNHPYLFDGAEPG 412 Query: 49 --------KEVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQ---------KAFP 89 + K+ L+ ++ K + +++ L L+ Sbjct: 413 PPYTTDMHLVTNSGKMVVLDKLLPKLKEQGSRVLIFSQMTRVLDILEDYCMWRNYEYCRL 472 Query: 90 QGRTLDKDPCT-IQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 G+T + I +NE + + G G+NL ++++ + W+ + Q Sbjct: 473 DGQTPHDERQDSINAYNEPNSTKFVFMLSTRAGGLGINL-ATADVVILYDSDWNPQVDLQ 531 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 ++R + G + V V+ I NT++E +++R K + +++ Sbjct: 532 AMDR-----AHRIGQTKTVRVFRFITDNTVEERIVERAEMKLRLDSIVIQ 576 >gi|71024321|ref|XP_762390.1| hypothetical protein UM06243.1 [Ustilago maydis 521] gi|46101890|gb|EAK87123.1| hypothetical protein UM06243.1 [Ustilago maydis 521] Length = 986 Score = 100 bits (249), Expect = 1e-19, Method: Composition-based stats. Identities = 35/184 (19%), Positives = 68/184 (36%), Gaps = 18/184 (9%) Query: 28 KTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAA-PIIVAYHFNSDLARL-- 84 +C+ LA K+ +L I A+A IV F S L + Sbjct: 788 LCNECIALATSHSQDLFASSSGSTKTRKMLSLLSQIRAADATEKTIVFSQFTSFLNIVEP 847 Query: 85 ---QKAFPQGR------TLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFF 135 + F R +++ + ++ + ++ + GLNL + ++ Sbjct: 848 HLQRHGFKYVRYDGSMKPQERESALERIRSDASVTVILISFKAGSTGLNLT-SCSRVILM 906 Query: 136 SLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 LWW+ + +Q +R + G R V +Y L ++T++E +L+ K + L Sbjct: 907 DLWWNPQIEEQAFDR-----AHRLGQTRDVTIYKLSIKDTVEERILKLQEKKRALAKAAL 961 Query: 196 NALK 199 K Sbjct: 962 EGSK 965 >gi|327348564|gb|EGE77421.1| helicase swr1 [Ajellomyces dermatitidis ATCC 18188] Length = 1684 Score = 100 bits (249), Expect = 1e-19, Method: Composition-based stats. Identities = 29/166 (17%), Positives = 68/166 (40%), Gaps = 19/166 (11%) Query: 44 EEKHWKEVHDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAF---------PQGR 92 +K + K++ L+ ++ ++ ++ L L++ G Sbjct: 1345 PDKRLLQYDCGKLQQLDKLLRKLQSGGHRALIFTQMTKMLDILEQFLNIHGHRYLRLDGA 1404 Query: 93 TLDKDPCTI--QEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 T + + + N+ +I S G G+NL G + ++F+ L W+ +Q +R Sbjct: 1405 TKVEQRQMLTERFNNDTRILAFILSSRSGGLGINLT-GADTVIFYDLDWNPAMDKQCQDR 1463 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + G R V +Y +++ TI+ +L++ K + D+++ Sbjct: 1464 C-----HRIGQTRDVHIYRFVSEYTIESNILRKANQKRMLDDVIIQ 1504 >gi|261205240|ref|XP_002627357.1| helicase swr1 [Ajellomyces dermatitidis SLH14081] gi|239592416|gb|EEQ74997.1| helicase swr1 [Ajellomyces dermatitidis SLH14081] Length = 1684 Score = 100 bits (249), Expect = 1e-19, Method: Composition-based stats. Identities = 29/166 (17%), Positives = 68/166 (40%), Gaps = 19/166 (11%) Query: 44 EEKHWKEVHDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAF---------PQGR 92 +K + K++ L+ ++ ++ ++ L L++ G Sbjct: 1345 PDKRLLQYDCGKLQQLDKLLRKLQSGGHRALIFTQMTKMLDILEQFLNIHGHRYLRLDGA 1404 Query: 93 TLDKDPCTI--QEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 T + + + N+ +I S G G+NL G + ++F+ L W+ +Q +R Sbjct: 1405 TKVEQRQMLTERFNNDTRILAFILSSRSGGLGINLT-GADTVIFYDLDWNPAMDKQCQDR 1463 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + G R V +Y +++ TI+ +L++ K + D+++ Sbjct: 1464 C-----HRIGQTRDVHIYRFVSEYTIESNILRKANQKRMLDDVIIQ 1504 >gi|209877571|ref|XP_002140227.1| SNF2 family N-terminal domain-containing protein [Cryptosporidium muris RN66] gi|209555833|gb|EEA05878.1| SNF2 family N-terminal domain-containing protein [Cryptosporidium muris RN66] Length = 1100 Score = 100 bits (249), Expect = 1e-19, Method: Composition-based stats. Identities = 47/225 (20%), Positives = 92/225 (40%), Gaps = 39/225 (17%) Query: 7 FQRELYCDLQGENIEAFNS---------ASKTVKCLQLANGAVYYDE---------EKHW 48 QR LY D+ +NI+A + ++ + N +D +H Sbjct: 426 MQRTLYRDILSKNIDALQERDSGGRVRLINLAMQLRKACNHPYLFDGYEDKNEDPFGEHV 485 Query: 49 KEVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARL---------QKAFPQGRTLDKD 97 E + K+ L+ + +K N + I++ L L + G T +D Sbjct: 486 IE-NSGKMIMLDRLTKKLLQNGSRILIFSQMARILDILEDFCYMRKYKYCRIDGNTSTED 544 Query: 98 PCT-IQEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 T I ++N+ I + + G G+NL +I++ + W+ + Q ++R Sbjct: 545 RDTQISDFNKPNSDISIFLLSTRAGGLGVNL-ATADIVIIYDSDWNPQVDLQAMDR---- 599 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 + G K+ V++Y L +NTI+E +L+R K ++ ++ K Sbjct: 600 -AHRIGQKKPVYIYRLFHENTIEEKILERANLKLQLESAIIQQGK 643 >gi|73977784|ref|XP_867131.1| PREDICTED: similar to SWI/SNF related matrix associated actin dependent regulator of chromatin subfamily A member 5 (SWI/SNF-related matrix-associated actin-dependent regulator of chromatin A5) (Sucrose nonfermenting protein 2 homolog) (hSNF2H)... isoform 3 [Canis familiaris] Length = 1034 Score = 100 bits (249), Expect = 1e-19, Method: Composition-based stats. Identities = 43/230 (18%), Positives = 88/230 (38%), Gaps = 40/230 (17%) Query: 1 MKQY---HKFQRELYCDLQGENIEAFNSASKTVK------CLQL--ANGAVYYDEEKHW- 48 +K Y K QRE Y + ++I+ NSA K K +QL Y + Sbjct: 410 VKIYVGLSKMQREWYTRILMKDIDILNSAGKMDKMRLLNILMQLRKCCNHPYLFDGAEPG 469 Query: 49 --------KEVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQ---------KAFP 89 + K+ L+ ++ K + +++ L L+ Sbjct: 470 PPYTTDMHLVTNSGKMVVLDKLLPKLKEQGSRVLIFSQMTRVLDILEDYCMWRNYEYCRL 529 Query: 90 QGRTL-DKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 G+T D+ +I +NE + + G G+NL ++++ + W+ + Q Sbjct: 530 DGQTPHDERQESINAYNEPNSTKFVFMLSTRAGGLGINL-ATADVVILYDSDWNPQVDLQ 588 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 ++R + G + V V+ I NT++E +++R K + +++ Sbjct: 589 AMDR-----AHRIGQTKTVRVFRFITDNTVEERIVERAEMKLRLDSIVIQ 633 >gi|83774735|dbj|BAE64858.1| unnamed protein product [Aspergillus oryzae] Length = 977 Score = 100 bits (249), Expect = 1e-19, Method: Composition-based stats. Identities = 32/163 (19%), Positives = 59/163 (36%), Gaps = 20/163 (12%) Query: 53 DEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQK-----------AFPQGRTLDKDPC 99 K++ ++ ++E K ++ L LQK + Sbjct: 627 SGKMQVVKSLLELWKDTGHKTLLFAQHRIMLDILQKFVESLSGFNYRRMDGTTPIAHRQS 686 Query: 100 TIQEWNE-GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQ 158 + E+N + + G G+NL G + ++ + W+ Q ER + Sbjct: 687 MVDEFNNNPDLHVFLLTTKVGGLGVNLT-GADRVIIYDPDWNPSTDVQARERAW-----R 740 Query: 159 AGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 G KR V VY L+ TI+E + R K + + +L K+ Sbjct: 741 LGQKRDVTVYRLMTAGTIEEKIYHRQIFKQFLTNKILKDPKQR 783 >gi|326427538|gb|EGD73108.1| nucleotide excision repair protein [Salpingoeca sp. ATCC 50818] Length = 865 Score = 100 bits (249), Expect = 1e-19, Method: Composition-based stats. Identities = 31/159 (19%), Positives = 55/159 (34%), Gaps = 21/159 (13%) Query: 52 HDEKIKALEV----IIEKANAAPIIVAYHFNSDLARLQKAFPQGRTL----------DKD 97 KI+AL + + I+ F L L+ +G Sbjct: 692 SSTKIEALLEELTALQSDTHCIKSIIFSQFTQFLDLLEWRLQRGGIRCVKLDGRMSPASR 751 Query: 98 PCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 I +N + +I + + G LNL + + WW+ Q ++RI Sbjct: 752 AAVIDAFNTKPEITVFLISLKAGGLALNLT-AASRVYITDPWWNPCAEAQAMDRI----- 805 Query: 157 RQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 + G R V V LI +N+I+ + Q K + + + Sbjct: 806 HRLGQNRPVEVRRLIIENSIESRIDQLQEKKRLLFESTV 844 >gi|239611425|gb|EEQ88412.1| helicase swr1 [Ajellomyces dermatitidis ER-3] Length = 1684 Score = 100 bits (249), Expect = 1e-19, Method: Composition-based stats. Identities = 29/166 (17%), Positives = 68/166 (40%), Gaps = 19/166 (11%) Query: 44 EEKHWKEVHDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAF---------PQGR 92 +K + K++ L+ ++ ++ ++ L L++ G Sbjct: 1345 PDKRLLQYDCGKLQQLDKLLRKLQSGGHRALIFTQMTKMLDILEQFLNIHGHRYLRLDGA 1404 Query: 93 TLDKDPCTI--QEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 T + + + N+ +I S G G+NL G + ++F+ L W+ +Q +R Sbjct: 1405 TKVEQRQMLTERFNNDTRILAFILSSRSGGLGINLT-GADTVIFYDLDWNPAMDKQCQDR 1463 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + G R V +Y +++ TI+ +L++ K + D+++ Sbjct: 1464 C-----HRIGQTRDVHIYRFVSEYTIESNILRKANQKRMLDDVIIQ 1504 >gi|73977790|ref|XP_867156.1| PREDICTED: similar to SWI/SNF related matrix associated actin dependent regulator of chromatin subfamily A member 5 (SWI/SNF-related matrix-associated actin-dependent regulator of chromatin A5) (Sucrose nonfermenting protein 2 homolog) (hSNF2H)... isoform 6 [Canis familiaris] Length = 1056 Score = 100 bits (249), Expect = 1e-19, Method: Composition-based stats. Identities = 43/230 (18%), Positives = 88/230 (38%), Gaps = 40/230 (17%) Query: 1 MKQY---HKFQRELYCDLQGENIEAFNSASKTVK------CLQL--ANGAVYYDEEKHW- 48 +K Y K QRE Y + ++I+ NSA K K +QL Y + Sbjct: 410 VKIYVGLSKMQREWYTRILMKDIDILNSAGKMDKMRLLNILMQLRKCCNHPYLFDGAEPG 469 Query: 49 --------KEVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQ---------KAFP 89 + K+ L+ ++ K + +++ L L+ Sbjct: 470 PPYTTDMHLVTNSGKMVVLDKLLPKLKEQGSRVLIFSQMTRVLDILEDYCMWRNYEYCRL 529 Query: 90 QGRTL-DKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 G+T D+ +I +NE + + G G+NL ++++ + W+ + Q Sbjct: 530 DGQTPHDERQESINAYNEPNSTKFVFMLSTRAGGLGINL-ATADVVILYDSDWNPQVDLQ 588 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 ++R + G + V V+ I NT++E +++R K + +++ Sbjct: 589 AMDR-----AHRIGQTKTVRVFRFITDNTVEERIVERAEMKLRLDSIVIQ 633 >gi|301777862|ref|XP_002924349.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5-like [Ailuropoda melanoleuca] Length = 1052 Score = 100 bits (249), Expect = 1e-19, Method: Composition-based stats. Identities = 43/230 (18%), Positives = 88/230 (38%), Gaps = 40/230 (17%) Query: 1 MKQY---HKFQRELYCDLQGENIEAFNSASKTVK------CLQL--ANGAVYYDEEKHW- 48 +K Y K QRE Y + ++I+ NSA K K +QL Y + Sbjct: 410 VKIYVGLSKMQREWYTRILMKDIDILNSAGKMDKMRLLNILMQLRKCCNHPYLFDGAEPG 469 Query: 49 --------KEVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQ---------KAFP 89 + K+ L+ ++ K + +++ L L+ Sbjct: 470 PPYTTDMHLVTNSGKMVVLDKLLPKLKEQGSRVLIFSQMTRVLDILEDYCMWRNYEYCRL 529 Query: 90 QGRTL-DKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 G+T D+ +I +NE + + G G+NL ++++ + W+ + Q Sbjct: 530 DGQTPHDERQESINAYNEPNSTKFVFMLSTRAGGLGINL-ATADVVILYDSDWNPQVDLQ 588 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 ++R + G + V V+ I NT++E +++R K + +++ Sbjct: 589 AMDR-----AHRIGQTKTVRVFRFITDNTVEERIVERAEMKLRLDSIVIQ 633 >gi|291401180|ref|XP_002716976.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent regulator of chromatin a5-like [Oryctolagus cuniculus] Length = 1051 Score = 100 bits (249), Expect = 1e-19, Method: Composition-based stats. Identities = 42/230 (18%), Positives = 86/230 (37%), Gaps = 40/230 (17%) Query: 1 MKQY---HKFQRELYCDLQGENIEAFNSASKTVK------CLQL--ANGAVYYDEEKHW- 48 +K Y K QRE Y + ++I+ NSA K K +QL Y + Sbjct: 409 VKIYVGLSKMQREWYTRILMKDIDILNSAGKMDKMRLLNILMQLRKCCNHPYLFDGAEPG 468 Query: 49 --------KEVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQ---------KAFP 89 + K+ L+ ++ K + +++ L L+ Sbjct: 469 PPYTTDMHLVTNSGKMVVLDKLLPKLKEQGSRVLIFSQMTRVLDILEDYCMWRNYEYCRL 528 Query: 90 QGRTLDKDPCT-IQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 G+T + I +NE + + G G+NL ++++ + W+ + Q Sbjct: 529 DGQTPHDERQDSINAYNEPNSTKFVFMLSTRAGGLGINL-ATADVVILYDSDWNPQVDLQ 587 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 ++R + G + V V+ I NT++E +++R K + +++ Sbjct: 588 AMDR-----AHRIGQTKTVRVFRFITDNTVEERIVERAEMKLRLDSIVIQ 632 >gi|255946808|ref|XP_002564171.1| Pc22g01270 [Penicillium chrysogenum Wisconsin 54-1255] gi|211591188|emb|CAP97415.1| Pc22g01270 [Penicillium chrysogenum Wisconsin 54-1255] Length = 1198 Score = 100 bits (249), Expect = 1e-19, Method: Composition-based stats. Identities = 29/161 (18%), Positives = 59/161 (36%), Gaps = 21/161 (13%) Query: 51 VHDEKIKALEVIIEKANAAPI----IVAYHFNSDLARLQ----------KAFPQGRTLDK 96 KI I++ + I+ F S L L+ F L + Sbjct: 999 FPSTKITKTLEILQANEDRGLEEKTIIFSQFTSLLDLLEVPLARRGWNHTRFDGSMNLKE 1058 Query: 97 DPCTIQEW-NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTR 155 + + N+ ++ + GLNL + ++ F +W+ Q ++R Sbjct: 1059 RNAAVTAFTNDPSCKIMLVSLKAGNSGLNL-VAASHVIMFDPFWNPYIEDQAVDR----- 1112 Query: 156 QRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + G R VFV+ L+ +NT+++ ++ K + L+ Sbjct: 1113 AHRIGQVRNVFVHRLLIENTVEDRIVTLQDQKRELISGALD 1153 >gi|58263400|ref|XP_569110.1| hypothetical protein CNB01040 [Cryptococcus neoformans var. neoformans JEC21] gi|57223760|gb|AAW41803.1| hypothetical protein CNB01040 [Cryptococcus neoformans var. neoformans JEC21] Length = 1277 Score = 100 bits (249), Expect = 1e-19, Method: Composition-based stats. Identities = 46/183 (25%), Positives = 75/183 (40%), Gaps = 32/183 (17%) Query: 33 LQLANGAVYYDEEKHWKEVHDEKIKALEV----IIEKANAAPIIVAYHFNSDLARLQKAF 88 LQ N V ++ + K+K L IIE+ + IIV F + L F Sbjct: 1079 LQAVNDEVSIED-----VLPSTKMKKLGELIDAIIEQDPSQKIIVFSQFVEYID-LCSIF 1132 Query: 89 PQGRTL-----------DKDPCTIQEWN----EGKIP-LLFAHPASCGHGLNLQYGGNIL 132 + R + D+ TI+++N E K P L G GLNL N + Sbjct: 1133 LRRRNIPHAKYVGSMKQDEREDTIKDFNRPMEEDKSPRCLLMSLKCGGVGLNLCI-ANHV 1191 Query: 133 VFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQD 192 + L W+ Q ++R + G R V V+ L+ +NTID+ +++ + K + D Sbjct: 1192 ICLDLAWNAATENQAVDR-----AHRIGQTREVVVHRLVVENTIDQRLMELQQQKQALSD 1246 Query: 193 LLL 195 + Sbjct: 1247 GAM 1249 >gi|317156769|ref|XP_001825991.2| DNA repair protein Rhp26/Rad26 [Aspergillus oryzae RIB40] Length = 1192 Score = 100 bits (249), Expect = 1e-19, Method: Composition-based stats. Identities = 32/163 (19%), Positives = 59/163 (36%), Gaps = 20/163 (12%) Query: 53 DEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQK-----------AFPQGRTLDKDPC 99 K++ ++ ++E K ++ L LQK + Sbjct: 736 SGKMQVVKSLLELWKDTGHKTLLFAQHRIMLDILQKFVESLSGFNYRRMDGTTPIAHRQS 795 Query: 100 TIQEWNE-GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQ 158 + E+N + + G G+NL G + ++ + W+ Q ER + Sbjct: 796 MVDEFNNNPDLHVFLLTTKVGGLGVNLT-GADRVIIYDPDWNPSTDVQARERAW-----R 849 Query: 159 AGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 G KR V VY L+ TI+E + R K + + +L K+ Sbjct: 850 LGQKRDVTVYRLMTAGTIEEKIYHRQIFKQFLTNKILKDPKQR 892 >gi|294659915|ref|XP_462354.2| DEHA2G18722p [Debaryomyces hansenii CBS767] gi|199434332|emb|CAG90861.2| DEHA2G18722p [Debaryomyces hansenii] Length = 834 Score = 100 bits (249), Expect = 1e-19, Method: Composition-based stats. Identities = 35/193 (18%), Positives = 75/193 (38%), Gaps = 17/193 (8%) Query: 13 CDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPII 72 C++ + ++A N ++ + + +V + KIK + I+ I Sbjct: 614 CEICMKRLDANNQSTDGTRFCKACGESVKVPKHHEDDYYVSSKIKQVLEILMTNRDRKTI 673 Query: 73 VAYHFNSDLARL-----QKAFPQGRTLDKDPCTIQEW------NEGKIPLLFAHPASCGH 121 + F S L K F + + N+ + +L Sbjct: 674 IFSQFPSLFKVLGDTLSTKGFKILTYDGSMDIKARNFALNSLKNDPDMNVLLCSLKCGSV 733 Query: 122 GLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVL 181 GLNL + ++ F WW+ + +Q I+R+ + G + V +Y L +NT+++ +L Sbjct: 734 GLNLTC-ASQVILFDPWWNPQIQEQAIDRV-----YRIGQTKPVDIYELTVKNTVEDNIL 787 Query: 182 QRLRTKSTIQDLL 194 + +TK + + + Sbjct: 788 KLQKTKRQLANAV 800 >gi|270014262|gb|EFA10710.1| domino [Tribolium castaneum] Length = 2260 Score = 100 bits (249), Expect = 1e-19, Method: Composition-based stats. Identities = 33/189 (17%), Positives = 75/189 (39%), Gaps = 19/189 (10%) Query: 22 AFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNS 79 A ++ ++A+ V + + K++ L+ ++ K + +++ Sbjct: 1433 AACLSAPATSLHRIASAMVTQFPDPRLIQYDCGKLQTLDKLLRKLKSEGHRVLIFTQMTK 1492 Query: 80 DLARLQK----------AFPQGRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYG 128 L L+ +D+ ++ +N + +I S G G+NL G Sbjct: 1493 MLDVLEAFLNFHGHIYLRLDGTTKVDQRQLLMERFNGDTRIFAFILSTRSGGIGVNLT-G 1551 Query: 129 GNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKS 188 + ++F+ W+ Q +R + G R V +Y L+++ TI+E +L++ K Sbjct: 1552 ADTVIFYDSDWNPTMDAQAQDRC-----HRIGQTRDVHIYRLVSERTIEENILKKANQKR 1606 Query: 189 TIQDLLLNA 197 + DL + Sbjct: 1607 LLGDLAIEG 1615 >gi|57096815|ref|XP_532676.1| PREDICTED: similar to SWI/SNF related matrix associated actin dependent regulator of chromatin subfamily A member 5 (SWI/SNF-related matrix-associated actin-dependent regulator of chromatin A5) (Sucrose nonfermenting protein 2 homolog) (hSNF2H)... isoform 1 [Canis familiaris] Length = 1052 Score = 100 bits (249), Expect = 1e-19, Method: Composition-based stats. Identities = 43/230 (18%), Positives = 88/230 (38%), Gaps = 40/230 (17%) Query: 1 MKQY---HKFQRELYCDLQGENIEAFNSASKTVK------CLQL--ANGAVYYDEEKHW- 48 +K Y K QRE Y + ++I+ NSA K K +QL Y + Sbjct: 410 VKIYVGLSKMQREWYTRILMKDIDILNSAGKMDKMRLLNILMQLRKCCNHPYLFDGAEPG 469 Query: 49 --------KEVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQ---------KAFP 89 + K+ L+ ++ K + +++ L L+ Sbjct: 470 PPYTTDMHLVTNSGKMVVLDKLLPKLKEQGSRVLIFSQMTRVLDILEDYCMWRNYEYCRL 529 Query: 90 QGRTL-DKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 G+T D+ +I +NE + + G G+NL ++++ + W+ + Q Sbjct: 530 DGQTPHDERQESINAYNEPNSTKFVFMLSTRAGGLGINL-ATADVVILYDSDWNPQVDLQ 588 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 ++R + G + V V+ I NT++E +++R K + +++ Sbjct: 589 AMDR-----AHRIGQTKTVRVFRFITDNTVEERIVERAEMKLRLDSIVIQ 633 >gi|50557268|ref|XP_506042.1| YALI0F30261p [Yarrowia lipolytica] gi|49651912|emb|CAG78855.1| YALI0F30261p [Yarrowia lipolytica] Length = 1353 Score = 100 bits (249), Expect = 1e-19, Method: Composition-based stats. Identities = 30/175 (17%), Positives = 67/175 (38%), Gaps = 27/175 (15%) Query: 43 DEEKHWKEVHDEKI----------KALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGR 92 + EK E DEK+ + LE I E+ I+ F S + + Sbjct: 1147 EAEKQKIEEEDEKLPPSAKALRCVELLEKIKEENPGEKTIIFSQFVSFMNLIGDELDNAG 1206 Query: 93 ----------TLDKDPCTIQEW-NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDL 141 D+ + + + I +L + GL L ++++ +W+ Sbjct: 1207 FEYLRYEGSMHADERSRAVTAFREDPSISVLLISLKAGNVGLTLTAANHVIIM-DPFWNP 1265 Query: 142 EEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 +Q ++R + G +R V V+ ++ + T+++ +L+ + K + + L+ Sbjct: 1266 YVEEQAMDR-----AHRIGQQRDVTVHKIVIEQTVEDRILELQKRKREMIESALD 1315 >gi|146419691|ref|XP_001485806.1| hypothetical protein PGUG_01477 [Meyerozyma guilliermondii ATCC 6260] Length = 1895 Score = 100 bits (249), Expect = 1e-19, Method: Composition-based stats. Identities = 39/200 (19%), Positives = 80/200 (40%), Gaps = 21/200 (10%) Query: 12 YCDLQGENIEAFNSASKTVKCLQLANGA-VYYDEEKHWKEVHDEKIKALEVIIEKANAAP 70 Y + +I + N A K + L + D+ + + ++K++ + Sbjct: 1620 YLRINKSDIRSINHAPKLLSLRTLLLECGIGVDDSDYIGKGKNKKLQQQITAEGVISDHR 1679 Query: 71 IIVAYHFNSDLARLQKAFPQ------------GRTLDKDPCTI-QEWNE-GKIPLLFAHP 116 ++ L ++ + G T +D +I +++NE I +L Sbjct: 1680 ALIFCQLKDMLDIVENELLKKHLPSVTYMRLDGSTDPRDRQSIVRKFNEDPSIDVLLLTT 1739 Query: 117 ASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTI 176 G GLNL G + ++F W+ Q ++R + G K+ V VY LI ++T+ Sbjct: 1740 KVGGLGLNLT-GADTVIFVEHDWNPMNDLQAMDR-----AHRLGQKKVVNVYRLITKHTL 1793 Query: 177 DELVLQRLRTKSTIQDLLLN 196 +E ++ + K I ++N Sbjct: 1794 EEKIMGLQKFKMNIASTVVN 1813 >gi|39968181|ref|XP_365481.1| hypothetical protein MGG_02183 [Magnaporthe oryzae 70-15] gi|145013063|gb|EDJ97704.1| hypothetical protein MGG_02183 [Magnaporthe oryzae 70-15] Length = 1912 Score = 100 bits (249), Expect = 1e-19, Method: Composition-based stats. Identities = 31/166 (18%), Positives = 70/166 (42%), Gaps = 19/166 (11%) Query: 44 EEKHWKEVHDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAF---------PQGR 92 +K + K++AL+ ++ +A ++ L L++ G Sbjct: 1574 PDKRLLQYDCGKLQALDRLLRKLQAGGHRALIFTQMTKVLDILEQFLNIHGHKYLRLDGA 1633 Query: 93 TLDKDPCTI-QEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 T + + +N + +I S G G+NL G + ++F+ W+ +Q +R Sbjct: 1634 TKVEQRQILTDRFNHDPRILCFILSTRSGGLGINLT-GADTVIFYDQDWNPAMDKQCQDR 1692 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + G R V +Y L++++TI+ +L++ K + D+++ Sbjct: 1693 C-----HRIGQTRDVHIYRLVSEHTIEANILRKASQKQMLDDVVIQ 1733 >gi|298715262|emb|CBJ27911.1| conserved unknown protein [Ectocarpus siliculosus] Length = 1021 Score = 100 bits (249), Expect = 1e-19, Method: Composition-based stats. Identities = 27/164 (16%), Positives = 62/164 (37%), Gaps = 21/164 (12%) Query: 54 EKIKALEVIIEKANAAPIIVAYHFNSDLARLQ----------KAFPQGRTLDKDPCTIQE 103 +++L + N +V F S L +Q T + ++ Sbjct: 843 ALLQSLHELRRSGNGDKAVVFSQFTSFLDVIQPFLLADGFRLARLDGSMTNKQRQAELKR 902 Query: 104 WNEGK----IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQA 159 + GK ++ A + G G+NL + + WW+ Q ++R+ + Sbjct: 903 F-AGKGGDGAEVMLASLMAAGTGINLTSANHCFI-ADPWWNASVESQAMDRV-----HRI 955 Query: 160 GFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETI 203 G + V V +++ +++++ +L+ K + L LK + + Sbjct: 956 GQTKPVRVVRMVSADSVEDRILEIQEAKEALGKGALRKLKPDEV 999 >gi|302922109|ref|XP_003053398.1| hypothetical protein NECHADRAFT_65429 [Nectria haematococca mpVI 77-13-4] gi|256734339|gb|EEU47685.1| hypothetical protein NECHADRAFT_65429 [Nectria haematococca mpVI 77-13-4] Length = 1013 Score = 100 bits (249), Expect = 1e-19, Method: Composition-based stats. Identities = 41/169 (24%), Positives = 74/169 (43%), Gaps = 19/169 (11%) Query: 50 EVHDEKIKALEVIIEK--ANAAPIIVAYHFNS---------DLARLQKAFPQGRTLDKDP 98 E+ K+K L +I++ N ++V F+ L +Q G T + Sbjct: 830 EMDSGKVKKLLELIQQYQENGDRVLVFSKFSRVIELLQEVLSLKGIQHRILMGNTNVSER 889 Query: 99 CT-IQEWNE-GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 T I E+N+ +IP+ + G G+NL N ++ F + ++ Q R Sbjct: 890 QTLIDEFNDDPEIPVFLLTTGAGGTGINLT-AANKVIIFDQSDNPQDDIQA-----ENRA 943 Query: 157 RQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIHV 205 + G KR V + LIA +TI+EL+ + + K + + + A++ E V Sbjct: 944 HRLGQKRDVEIIRLIASHTIEELIYKACQKKIELANKVTGAVEDEDAAV 992 >gi|125559347|gb|EAZ04883.1| hypothetical protein OsI_27065 [Oryza sativa Indica Group] Length = 821 Score = 100 bits (249), Expect = 1e-19, Method: Composition-based stats. Identities = 31/165 (18%), Positives = 65/165 (39%), Gaps = 23/165 (13%) Query: 43 DEEKHWKEVHDEKIKALEVIIEKANA----APIIVAYHFNSDLARLQKAFPQGR------ 92 D + K++AL ++ ++ + + ++ F L L+ Sbjct: 634 DSSVNLDRPLSSKVQALLKLLRRSQSEDPLSKSVIFSQFRKMLILLEGPLKAAGFNILRL 693 Query: 93 ----TLDKDPCTIQEWN--EGKIP-LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQ 145 T K I+++ P +L A + G G+NL + + F WW+ + Sbjct: 694 DGSMTAKKRSEVIRQFGCVGPDSPTVLLASLKAAGAGVNLT-AASTVYLFDPWWNPGVEE 752 Query: 146 QMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 Q ++R+ + G + V V LI +++I+E +L+ K + Sbjct: 753 QAMDRV-----HRIGQTKEVKVVRLIVKDSIEERMLELQERKKKL 792 >gi|295658318|ref|XP_002789720.1| helicase swr1 [Paracoccidioides brasiliensis Pb01] gi|226283023|gb|EEH38589.1| helicase swr1 [Paracoccidioides brasiliensis Pb01] Length = 1678 Score = 100 bits (249), Expect = 1e-19, Method: Composition-based stats. Identities = 29/166 (17%), Positives = 68/166 (40%), Gaps = 19/166 (11%) Query: 44 EEKHWKEVHDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAF---------PQGR 92 +K + K++ L+ ++ ++ ++ L L++ G Sbjct: 1343 PDKRLLQYDCGKLQQLDKLLRKLQSGGHRALIFTQMTKMLDILEQFLNIHGHRYLRLDGA 1402 Query: 93 TLDKDPCTI--QEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 T + + + N+ +I S G G+NL G + ++F+ L W+ +Q +R Sbjct: 1403 TKVEQRQMLTERFNNDTRILAFILSSRSGGLGINLT-GADTVIFYDLDWNPAMDKQCQDR 1461 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + G R V +Y +++ TI+ +L++ K + D+++ Sbjct: 1462 C-----HRIGQTRDVHIYRFVSEYTIESNILRKANQKRMLDDVIIQ 1502 >gi|115473675|ref|NP_001060436.1| Os07g0642400 [Oryza sativa Japonica Group] gi|23237908|dbj|BAC16482.1| putative RUSH-1alpha [Oryza sativa Japonica Group] gi|50509930|dbj|BAD30251.1| putative RUSH-1alpha [Oryza sativa Japonica Group] gi|113611972|dbj|BAF22350.1| Os07g0642400 [Oryza sativa Japonica Group] Length = 821 Score = 100 bits (249), Expect = 1e-19, Method: Composition-based stats. Identities = 31/165 (18%), Positives = 65/165 (39%), Gaps = 23/165 (13%) Query: 43 DEEKHWKEVHDEKIKALEVIIEKANA----APIIVAYHFNSDLARLQKAFPQGR------ 92 D + K++AL ++ ++ + + ++ F L L+ Sbjct: 634 DSSVNLDRPLSSKVQALLKLLRRSQSEDPLSKSVIFSQFRKMLILLEGPLKAAGFNILRL 693 Query: 93 ----TLDKDPCTIQEWN--EGKIP-LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQ 145 T K I+++ P +L A + G G+NL + + F WW+ + Sbjct: 694 DGSMTAKKRSEVIRQFGCVGPDSPTVLLASLKAAGAGVNLT-AASTVYLFDPWWNPGVEE 752 Query: 146 QMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 Q ++R+ + G + V V LI +++I+E +L+ K + Sbjct: 753 QAMDRV-----HRIGQTKEVKVVRLIVKDSIEERMLELQERKKKL 792 >gi|58266612|ref|XP_570462.1| DNA supercoiling [Cryptococcus neoformans var. neoformans JEC21] gi|134110952|ref|XP_775940.1| hypothetical protein CNBD3470 [Cryptococcus neoformans var. neoformans B-3501A] gi|50258606|gb|EAL21293.1| hypothetical protein CNBD3470 [Cryptococcus neoformans var. neoformans B-3501A] gi|57226695|gb|AAW43155.1| DNA supercoiling, putative [Cryptococcus neoformans var. neoformans JEC21] Length = 818 Score = 100 bits (249), Expect = 1e-19, Method: Composition-based stats. Identities = 36/175 (20%), Positives = 67/175 (38%), Gaps = 21/175 (12%) Query: 45 EKHWKEVHDEKIKALEVIIEKAN---AAPIIVAYHFNSDLARLQK----------AFPQG 91 ++ + K LE +++ N I++ + L ++K Sbjct: 567 DRTVNCQYSGKFVVLERMLDHINHHTNDKIVLISNATQTLDLMEKLCRSKRYGYLRLDGS 626 Query: 92 RTLDKDPCTIQEWN--EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIE 149 ++ K + ++N E K + + G G+NL G N LV F W+ QQ + Sbjct: 627 MSVPKRSKIVAQFNQPESKEFVFLLSSKAGGCGINL-IGANRLVLFDPDWNPASDQQALA 685 Query: 150 RIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIH 204 R+ + G K+ FVY TI+E + QR K + +++ + H Sbjct: 686 RVW-----RDGQKKECFVYRFQTTGTIEEKIFQRQCQKQNLSACVVDEAEDTARH 735 >gi|260942857|ref|XP_002615727.1| hypothetical protein CLUG_04609 [Clavispora lusitaniae ATCC 42720] gi|238851017|gb|EEQ40481.1| hypothetical protein CLUG_04609 [Clavispora lusitaniae ATCC 42720] Length = 343 Score = 100 bits (249), Expect = 1e-19, Method: Composition-based stats. Identities = 29/166 (17%), Positives = 68/166 (40%), Gaps = 19/166 (11%) Query: 44 EEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQK----------AFPQG 91 +K + K++ L ++ AN ++ L L++ Sbjct: 69 PDKQLLQYDCGKLQKLATLLHDLVANGHRALIFTQMTKVLDILEQFLNFRGYRYMRLDGA 128 Query: 92 RTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 ++ +++N + KIP+ S G G+NL G + ++F+ W+ +Q +R Sbjct: 129 TKIEDRQLMTEKFNRDPKIPVFILSTRSGGLGINLT-GADTVIFYDSDWNPAMDKQCQDR 187 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + G R V +Y +++ TI+ +L++ K + ++++ Sbjct: 188 C-----HRIGQMRDVHIYRFVSEYTIESNILKKANQKRQLDNVVIQ 228 >gi|168051599|ref|XP_001778241.1| SNF2 family DNA-dependent ATPase [Physcomitrella patens subsp. patens] gi|162670338|gb|EDQ56908.1| SNF2 family DNA-dependent ATPase [Physcomitrella patens subsp. patens] Length = 1245 Score = 100 bits (249), Expect = 1e-19, Method: Composition-based stats. Identities = 29/166 (17%), Positives = 65/166 (39%), Gaps = 20/166 (12%) Query: 52 HDEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQ---------KAFPQGRTLDKDPCT 100 + K+ L+ ++ K + +++ F L L+ G+ + Sbjct: 616 NSGKLLLLDKMMTKLHSQGHRVLIYSQFTRMLDILEDWLHLKKWGYERIDGKISGSERQI 675 Query: 101 -IQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 I +N + G G+NL + ++ + W+ Q + R Sbjct: 676 RIDRYNSPNSTKFCFLLSTRAGGLGINL-ATADTVIIYDSDWNPHADLQAMAR-----AH 729 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETI 203 + G + V ++ L+ + TI+E ++Q + K ++ L++ +KKE I Sbjct: 730 RLGQQNKVMIFRLVTRGTIEERMMQMTKKKMVLEHLVVGRMKKENI 775 >gi|224044097|ref|XP_002190618.1| PREDICTED: hypothetical protein [Taeniopygia guttata] Length = 1168 Score = 100 bits (248), Expect = 1e-19, Method: Composition-based stats. Identities = 36/156 (23%), Positives = 65/156 (41%), Gaps = 19/156 (12%) Query: 59 LEVIIEKANAAPIIVAYHFNSDLA----RLQKAFPQGRTLD------KDPCTIQEWNEGK 108 L+ I +V + S L LQ+ + T+D + ++E+N Sbjct: 1005 LKTIQSHPEPQKSVVVSQWTSMLKVVAVHLQRLGLKCATVDGSVNPKQRMDVVEEFNNNP 1064 Query: 109 I--PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVF 166 ++ + G GLNL GGN L + W+ Q +RI + G K+ V Sbjct: 1065 KGPQVMLVSLLAGGVGLNLT-GGNHLFLLDMHWNPALEDQACDRI-----YRVGQKKDVV 1118 Query: 167 VYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKET 202 ++ + + T++E +LQ + K + +L+ K ET Sbjct: 1119 IHRFVCEGTVEENILQLQKRKKGLAQQILSG-KGET 1153 >gi|148678936|gb|EDL10883.1| SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5 [Mus musculus] Length = 993 Score = 100 bits (248), Expect = 1e-19, Method: Composition-based stats. Identities = 42/230 (18%), Positives = 86/230 (37%), Gaps = 40/230 (17%) Query: 1 MKQY---HKFQRELYCDLQGENIEAFNSASKTVK------CLQL--ANGAVYYDEEKHW- 48 +K Y K QRE Y + ++I+ NSA K K +QL Y + Sbjct: 351 VKIYVGLSKMQREWYTRILMKDIDILNSAGKMDKMRLLNILMQLRKCCNHPYLFDGAEPG 410 Query: 49 --------KEVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQ---------KAFP 89 + K+ L+ ++ K + +++ L L+ Sbjct: 411 PPYTTDMHLVTNSGKMVVLDKLLPKLKEQGSRVLIFSQMTRVLDILEDYCMWRNYEYCRL 470 Query: 90 QGRTLDKDPCT-IQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 G+T + I +NE + + G G+NL ++++ + W+ + Q Sbjct: 471 DGQTPHDERQDSINAYNEPNSTKFVFMLSTRAGGLGINL-ATADVVILYDSDWNPQVDLQ 529 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 ++R + G + V V+ I NT++E +++R K + +++ Sbjct: 530 AMDR-----AHRIGQTKTVRVFRFITDNTVEERIVERAEMKLRLDSIVIQ 574 >gi|73977782|ref|XP_867119.1| PREDICTED: similar to SWI/SNF related matrix associated actin dependent regulator of chromatin subfamily A member 5 (SWI/SNF-related matrix-associated actin-dependent regulator of chromatin A5) (Sucrose nonfermenting protein 2 homolog) (hSNF2H)... isoform 2 [Canis familiaris] Length = 1046 Score = 100 bits (248), Expect = 1e-19, Method: Composition-based stats. Identities = 43/230 (18%), Positives = 88/230 (38%), Gaps = 40/230 (17%) Query: 1 MKQY---HKFQRELYCDLQGENIEAFNSASKTVK------CLQL--ANGAVYYDEEKHW- 48 +K Y K QRE Y + ++I+ NSA K K +QL Y + Sbjct: 404 VKIYVGLSKMQREWYTRILMKDIDILNSAGKMDKMRLLNILMQLRKCCNHPYLFDGAEPG 463 Query: 49 --------KEVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQ---------KAFP 89 + K+ L+ ++ K + +++ L L+ Sbjct: 464 PPYTTDMHLVTNSGKMVVLDKLLPKLKEQGSRVLIFSQMTRVLDILEDYCMWRNYEYCRL 523 Query: 90 QGRTL-DKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 G+T D+ +I +NE + + G G+NL ++++ + W+ + Q Sbjct: 524 DGQTPHDERQESINAYNEPNSTKFVFMLSTRAGGLGINL-ATADVVILYDSDWNPQVDLQ 582 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 ++R + G + V V+ I NT++E +++R K + +++ Sbjct: 583 AMDR-----AHRIGQTKTVRVFRFITDNTVEERIVERAEMKLRLDSIVIQ 627 >gi|291221939|ref|XP_002730974.1| PREDICTED: helicase, lymphoid specific-like [Saccoglossus kowalevskii] Length = 905 Score = 100 bits (248), Expect = 2e-19, Method: Composition-based stats. Identities = 29/158 (18%), Positives = 61/158 (38%), Gaps = 22/158 (13%) Query: 53 DEKIKALEVIIEKANAAPIIVAYHFNSDLARL-----QKAFPQGRT------LDKDPCTI 101 D + AL+ +++ L L + F R +D+ Sbjct: 670 DRLLPALKE-----RGHKVLLFSQMTKMLDILGDYCFLRKFKTCRLDGTMSYVDRQEQIS 724 Query: 102 QEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGF 161 N+ + + G GLNL + ++ + W+ + Q +R + G Sbjct: 725 TFNNDKDAFIFLLSTRAGGLGLNL-ASADTVIIYDSDWNPQSDLQAQDRC-----HRIGQ 778 Query: 162 KRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 + V V+ L+ QNTID+ +++R K ++ ++++ K Sbjct: 779 NKPVTVFRLVTQNTIDQKIVERASAKRKLEKMVIHQGK 816 >gi|222622221|gb|EEE56353.1| hypothetical protein OsJ_05476 [Oryza sativa Japonica Group] Length = 2095 Score = 100 bits (248), Expect = 2e-19, Method: Composition-based stats. Identities = 44/227 (19%), Positives = 88/227 (38%), Gaps = 46/227 (20%) Query: 1 MKQYHKF-----QRELYCDLQGENIEAFNSASKTVK--------CLQLANGAVYYDEEKH 47 +K Y KF ++E+ ++ ++ S K + L+L + + E Sbjct: 1804 LKLYDKFSNSNAKQEISTIVKENELDQSTSQPKATRHVFQALQYLLKLCSHPLLVTGESP 1863 Query: 48 WKEVHDEKIKALEVI-------IEKANAAPIIVAYHFNSDLARLQK---------AFPQG 91 D + L+ I + + +P +VA L + + Sbjct: 1864 ----PDYLVDLLKEIGMGTGDELHDLHHSPKLVA------LQEILQECGIGVTYLRLDGS 1913 Query: 92 RTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 +K ++ +N + I +L G GLNL + LVF W+ + Q ++R Sbjct: 1914 VEPEKRFEIVKAFNSDPTIDVLLLTTHVGGLGLNLT-SADTLVFMEHDWNPMKDLQAMDR 1972 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + G ++ V V+ LI + T++E V+ R K ++ + ++NA Sbjct: 1973 -----AHRLGQRKVVNVHRLIMRGTLEEKVMSLQRFKVSVANAVINA 2014 >gi|226874878|ref|NP_001152878.1| TATA-binding protein-associated factor 172 [Danio rerio] gi|220678558|emb|CAX13537.1| novel protein similar to H.sapiens BTAF1, BTAF1 RNA polymerase II, B-TFIID transcription factor-associated, 170kDa (Mot1 homolog, S. cerevisiae) (BTAF1) [Danio rerio] gi|220679212|emb|CAX14073.1| novel protein similar to H.sapiens BTAF1, BTAF1 RNA polymerase II, B-TFIID transcription factor-associated, 170kDa (Mot1 homolog, S. cerevisiae) (BTAF1) [Danio rerio] Length = 1858 Score = 100 bits (248), Expect = 2e-19, Method: Composition-based stats. Identities = 29/142 (20%), Positives = 57/142 (40%), Gaps = 20/142 (14%) Query: 69 APIIVAYHFNSDLARLQKAFPQGRTLD--------------KDPCTIQEWNEGKIPLLFA 114 +++ S L +++ + + + + N+ I +L Sbjct: 1652 HRVLIFCQLKSMLDIVEQDLLKPQLPGVTYLRLDGSVQAGLRHSIVSRFNNDPSIDVLLL 1711 Query: 115 HPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQN 174 G GLNL G + +VF W+ Q ++R + G KR V VY LI + Sbjct: 1712 TTHVGGLGLNLT-GADTVVFVEHDWNPMRDLQAMDR-----AHRIGQKRVVNVYRLITRG 1765 Query: 175 TIDELVLQRLRTKSTIQDLLLN 196 T++E ++ + K TI + +++ Sbjct: 1766 TLEEKIMGLQKFKMTIANTVIS 1787 >gi|326918376|ref|XP_003205465.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5-like [Meleagris gallopavo] Length = 1020 Score = 100 bits (248), Expect = 2e-19, Method: Composition-based stats. Identities = 43/230 (18%), Positives = 88/230 (38%), Gaps = 40/230 (17%) Query: 1 MKQY---HKFQRELYCDLQGENIEAFNSASKTVK------CLQL--ANGAVYYDEEKHW- 48 +K Y K QRE Y + ++I+ NSA K K +QL Y + Sbjct: 377 VKIYVGLSKMQREWYTRILMKDIDILNSAGKLDKMRLLNILMQLRKCCNHPYLFDGAEPG 436 Query: 49 --------KEVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQ---------KAFP 89 + K+ L+ ++ K + +++ L L+ Sbjct: 437 PPYTTDMHLVTNSGKMVVLDKLLPKLKEQGSRVLIFSQMTRVLDILEDYCMWRNYEYCRL 496 Query: 90 QGRTL-DKDPCTIQEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 G+T D+ +I +NE + + G G+NL ++++ + W+ + Q Sbjct: 497 DGQTPHDERQASINAYNEPGSSKFVFMLSTRAGGLGINL-ATADVVILYDSDWNPQVDLQ 555 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 ++R + G + V V+ I NT++E +++R K + +++ Sbjct: 556 AMDR-----AHRIGQTKTVRVFRFITDNTVEERIVERAEMKLRLDSIVIQ 600 >gi|126331506|ref|XP_001377204.1| PREDICTED: similar to SWI/SNF-related matrix-associated actin-dependent regulator of chromatin a5 [Monodelphis domestica] Length = 1050 Score = 100 bits (248), Expect = 2e-19, Method: Composition-based stats. Identities = 42/230 (18%), Positives = 86/230 (37%), Gaps = 40/230 (17%) Query: 1 MKQY---HKFQRELYCDLQGENIEAFNSASKTVK------CLQL--ANGAVYYDEEKHW- 48 +K Y K QRE Y + ++I+ NSA K K +QL Y + Sbjct: 408 VKIYVGLSKMQREWYTRILMKDIDILNSAGKMDKMRLLNILMQLRKCCNHPYLFDGAEPG 467 Query: 49 --------KEVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQ---------KAFP 89 + K+ L+ ++ K + +++ L L+ Sbjct: 468 PPYTTDMHLVTNSGKMVVLDKLLPKLKEQDSRVLIFSQMTRVLDILEDYCMWRNYEYCRL 527 Query: 90 QGRTLDKDPCT-IQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 G+T + I +NE + + G G+NL ++++ + W+ + Q Sbjct: 528 DGQTPHDERQDSINAYNEPNSSKFVFMLSTRAGGLGINL-ATADVVILYDSDWNPQVDLQ 586 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 ++R + G + V V+ I NT++E +++R K + +++ Sbjct: 587 AMDR-----AHRIGQTKTVRVFRFITDNTVEERIVERAEMKLRLDSIVIQ 631 >gi|255937135|ref|XP_002559594.1| Pc13g11770 [Penicillium chrysogenum Wisconsin 54-1255] gi|211584214|emb|CAP92246.1| Pc13g11770 [Penicillium chrysogenum Wisconsin 54-1255] Length = 834 Score = 100 bits (248), Expect = 2e-19, Method: Composition-based stats. Identities = 26/166 (15%), Positives = 64/166 (38%), Gaps = 20/166 (12%) Query: 52 HDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQK-----------AFPQGRTLDKDP 98 K+ L+ ++ I++ F + L +++ + Sbjct: 595 ASGKMLLLDRLVACLLKKGHKILIFSQFKTQLDIIEEWATTLRSWDCCRIDGAIAQSERQ 654 Query: 99 CTIQEWNEGKI-PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 I+ +N K L + G G+NL + ++ F W+ ++ Q R Sbjct: 655 AQIKNFNTKKSHKLFLLSTRAGGQGINLT-AADTVIIFDSDWNPQQDLQA-----QDRAH 708 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETI 203 + G + V +Y L + T+++ +L++ +K ++ L++ K ++ Sbjct: 709 RIGQTKPVIIYRLATKGTVEQTLLEKADSKRRLERLVIQKGKFRSL 754 >gi|296195486|ref|XP_002745367.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 isoform 2 [Callithrix jacchus] gi|296195488|ref|XP_002745368.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 isoform 3 [Callithrix jacchus] Length = 995 Score = 100 bits (248), Expect = 2e-19, Method: Composition-based stats. Identities = 42/230 (18%), Positives = 86/230 (37%), Gaps = 40/230 (17%) Query: 1 MKQY---HKFQRELYCDLQGENIEAFNSASKTVK------CLQL--ANGAVYYDEEKHW- 48 +K Y K QRE Y + ++I+ NSA K K +QL Y + Sbjct: 353 VKIYVGLSKMQREWYTRILMKDIDILNSAGKMDKMRLLNILMQLRKCCNHPYLFDGAEPG 412 Query: 49 --------KEVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQ---------KAFP 89 + K+ L+ ++ K + +++ L L+ Sbjct: 413 PPYTTDMHLVTNSGKMVVLDKLLPKLKEQGSRVLIFSQMTRVLDILEDYCMWRNYEYCRL 472 Query: 90 QGRTLDKDPCT-IQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 G+T + I +NE + + G G+NL ++++ + W+ + Q Sbjct: 473 DGQTPHDERQDSINAYNEPNSTKFVFMLSTRAGGLGINL-ATADVVILYDSDWNPQVDLQ 531 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 ++R + G + V V+ I NT++E +++R K + +++ Sbjct: 532 AMDR-----AHRIGQTKTVRVFRFITDNTVEERIVERAEMKLRLDSIVIQ 576 >gi|167521105|ref|XP_001744891.1| hypothetical protein [Monosiga brevicollis MX1] gi|163776505|gb|EDQ90124.1| predicted protein [Monosiga brevicollis MX1] Length = 1094 Score = 100 bits (248), Expect = 2e-19, Method: Composition-based stats. Identities = 31/159 (19%), Positives = 58/159 (36%), Gaps = 37/159 (23%) Query: 36 ANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAP----IIVAYHFNSDLARLQKAFPQG 91 A D+ +HW + K+KAL ++ A P +IV + S L ++ Sbjct: 942 ATAPPNEDDRQHW--LSSSKLKALLADLDAATQQPDRPKVIVFSQWTSMLDLIE------ 993 Query: 92 RTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERI 151 + + G GLNL + ++ WW Q I+R+ Sbjct: 994 -------------------VFLMTLRTGGVGLNLT-AASHVILVDPWWSPAVEAQAIDRV 1033 Query: 152 GVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 + G + V + I +++I+E +L + K + Sbjct: 1034 -----HRIGQDKPVTIKRYIMRDSIEERILALQKRKRAL 1067 >gi|85090195|ref|XP_958302.1| helicase SWR1 [Neurospora crassa OR74A] gi|74696276|sp|Q7S133|SWR1_NEUCR RecName: Full=Helicase swr-1 gi|28919649|gb|EAA29066.1| helicase SWR1 [Neurospora crassa OR74A] Length = 1845 Score = 100 bits (248), Expect = 2e-19, Method: Composition-based stats. Identities = 31/166 (18%), Positives = 70/166 (42%), Gaps = 19/166 (11%) Query: 44 EEKHWKEVHDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAF---------PQGR 92 +K + K++AL+ ++ +A ++ L L++ G Sbjct: 1496 PDKRLLQYDCGKLQALDKLLRKLQAGGHRALIFTQMTKVLDILEQFLNIHGHKYLRLDGA 1555 Query: 93 TLDKDPCTI-QEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 T + + +N + +I S G G+NL G + ++F+ W+ +Q +R Sbjct: 1556 TKVEQRQILTDRFNHDPRILCFILSTRSGGLGINLT-GADTVIFYDQDWNPAMDKQCQDR 1614 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + G R V +Y L++++TI+ +L++ K + D+++ Sbjct: 1615 C-----HRIGQTRDVHIYRLVSEHTIEANILRKASQKQMLDDVVIQ 1655 >gi|212638494|ref|YP_002315014.1| Superfamily II DNA/RNA helicase, SNF2 family [Anoxybacillus flavithermus WK1] gi|212559974|gb|ACJ33029.1| Superfamily II DNA/RNA helicase, SNF2 family [Anoxybacillus flavithermus WK1] Length = 349 Score = 100 bits (248), Expect = 2e-19, Method: Composition-based stats. Identities = 35/200 (17%), Positives = 76/200 (38%), Gaps = 27/200 (13%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEV 61 ++Y Q++ + + I AN +K+ E+ Sbjct: 165 REYKIIQKDRVLETKDGKIAFDTIMKLQHGLRYYAN--------------QKDKLSYTEM 210 Query: 62 IIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPC------TIQEWNEGKIPLLFAH 115 + E I++ Y++ + L + +T+ + ++W+ K + Sbjct: 211 LAEGTEE-NIVIFYYYQQEKEDLMNLLGKSKTIYEVSGKVNKLPDREKWSNLKNTVTLVQ 269 Query: 116 PASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNT 175 + G+ LQY NI++F++ + +++ Q + R + G + V VY I +N+ Sbjct: 270 YQAGAAGIELQY-ANIVIFYTPTYSYQDYDQALGRC-----YRNGQTKKVTVYRYITKNS 323 Query: 176 IDELVLQRLRTKSTIQDLLL 195 I+E V + L K + L Sbjct: 324 IEEAVYEALAAKKDFTEELF 343 >gi|322705041|gb|EFY96630.1| helicase SWR1 [Metarhizium anisopliae ARSEF 23] Length = 1731 Score = 100 bits (248), Expect = 2e-19, Method: Composition-based stats. Identities = 30/166 (18%), Positives = 69/166 (41%), Gaps = 19/166 (11%) Query: 44 EEKHWKEVHDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAF---------PQGR 92 +K + K++ L+ ++ +A ++ L L++ G Sbjct: 1400 PDKRLLQYDCGKLQVLDKLLRKLQAGGHRALIFTQMTKVLDILEQFLNIHGHKYLRLDGA 1459 Query: 93 TLDKDPCTI--QEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 T + + + N+ +I S G G+NL G + ++F+ W+ +Q +R Sbjct: 1460 TKVEQRQILTDRFNNDPRILCFILSTRSGGLGINLT-GADTVIFYDQDWNPAMDKQCQDR 1518 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + G R V +Y L++++TI+ +L++ K + D+++ Sbjct: 1519 C-----HRIGQTRDVHIYRLVSEHTIEANILRKASQKQMLDDVVIQ 1559 >gi|155370375|ref|YP_001425909.1| hypothetical protein FR483_N277L [Paramecium bursaria Chlorella virus FR483] gi|155123695|gb|ABT15562.1| hypothetical protein FR483_N277L [Paramecium bursaria Chlorella virus FR483] Length = 554 Score = 100 bits (248), Expect = 2e-19, Method: Composition-based stats. Identities = 38/209 (18%), Positives = 72/209 (34%), Gaps = 29/209 (13%) Query: 1 MKQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYY---DEEKHWKEVHDEKIK 57 +K Y + G++ ++ Q D + + E K+K Sbjct: 332 LKAYKAY---------GDSEGRMEMLKTLLRLRQCTANITMVPKNDSKDEFYEGTSTKLK 382 Query: 58 ALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTL----------DKDPCTIQEWNE- 106 LE I+ + ++ HF+ ++ ++ D+ I+ +NE Sbjct: 383 MLEDDIKASPIQKTLIFAHFHKEMTAIKDMLLSNGHKSVSIHGNVSGDERVKAIKHFNED 442 Query: 107 GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVF 166 A+ G GLNLQ I + + W+ Q I R + G + V Sbjct: 443 PATNFFIIQIAAGGVGLNLQTASRIYI-NGVDWNGTSETQAIAR-----AHRIGQTKPVI 496 Query: 167 VYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 V LI ++ID+ ++ + K +L Sbjct: 497 VKRLIINDSIDDAIIGLQQKKFGAAADIL 525 >gi|154297606|ref|XP_001549229.1| hypothetical protein BC1G_12648 [Botryotinia fuckeliana B05.10] gi|150858471|gb|EDN33663.1| hypothetical protein BC1G_12648 [Botryotinia fuckeliana B05.10] Length = 1607 Score = 100 bits (248), Expect = 2e-19, Method: Composition-based stats. Identities = 29/166 (17%), Positives = 68/166 (40%), Gaps = 19/166 (11%) Query: 44 EEKHWKEVHDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQK----------AFPQG 91 +K + K++ L+ ++ +A ++ L L++ Sbjct: 1276 PDKRLLQYDCGKLQTLDKLLRKLQAGGHRALIFTQMTKVLDILEQFLNIHGHKYLRLDGA 1335 Query: 92 RTLDKDPCTIQEWNEG-KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 +++ +N +I S G G+NL G + ++F+ L W+ +Q +R Sbjct: 1336 TKIEQRQILTDRFNNDTRILAFILSSRSGGLGINLT-GADTVIFYDLDWNPAMDKQCQDR 1394 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + G R V +Y L++++TI+ +L++ K + D+++ Sbjct: 1395 C-----HRIGQTRDVHIYRLVSEHTIEANILRKANQKRMLDDVVIQ 1435 >gi|331226428|ref|XP_003325884.1| ISWI chromatin-remodeling complex ATPase ISW2 [Puccinia graminis f. sp. tritici CRL 75-36-700-3] gi|309304874|gb|EFP81465.1| ISWI chromatin-remodeling complex ATPase ISW2 [Puccinia graminis f. sp. tritici CRL 75-36-700-3] Length = 1071 Score = 100 bits (248), Expect = 2e-19, Method: Composition-based stats. Identities = 35/223 (15%), Positives = 76/223 (34%), Gaps = 45/223 (20%) Query: 13 CDLQGENIEAFNSASKTVKCLQL--ANGAVYYDEEKHWKEV--------HDEKIKALEVI 62 + + + + + +QL Y + K+ L+ I Sbjct: 500 LEAEEGSTNSQSYKKLLNLLMQLRKVCNHPYLMPNSEPEPFLIAEHIVNVSSKLVMLDKI 559 Query: 63 IEKA--NAAPIIVAYHFNSDLARLQKAFPQGRTLD-----------KDPCTIQEWNEGK- 108 ++ +++ F S L + + F R +D + I+ + + K Sbjct: 560 LKSELPKGKRLLIFSSFTSMLD-ILEDFLNLRQIDYLRLDGSTPVARRNLAIRIFQQTKT 618 Query: 109 --------------IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 +P+ + G G+NL + +V + W+ + Q I R Sbjct: 619 MDTLKSHGSSSQRIVPIFLISTKAGGLGINLT-AADTVVLYDSSWNPQVDIQAIAR---- 673 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + G + V VY LI +++ ++ RLR K + +L++ Sbjct: 674 -AHRIGQTQNVTVYRLICAESVEHQMIGRLRKKLYLSLKILDS 715 >gi|297293444|ref|XP_001093597.2| PREDICTED: SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5-like isoform 2 [Macaca mulatta] Length = 995 Score = 100 bits (248), Expect = 2e-19, Method: Composition-based stats. Identities = 42/230 (18%), Positives = 86/230 (37%), Gaps = 40/230 (17%) Query: 1 MKQY---HKFQRELYCDLQGENIEAFNSASKTVK------CLQL--ANGAVYYDEEKHW- 48 +K Y K QRE Y + ++I+ NSA K K +QL Y + Sbjct: 353 VKIYVGLSKMQREWYTRILMKDIDILNSAGKMDKMRLLNILMQLRKCCNHPYLFDGAEPG 412 Query: 49 --------KEVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQ---------KAFP 89 + K+ L+ ++ K + +++ L L+ Sbjct: 413 PPYTTDMHLVTNSGKMVVLDKLLPKLKEQGSRVLIFSQMTRVLDILEDYCMWRNYEYCRL 472 Query: 90 QGRTLDKDPCT-IQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 G+T + I +NE + + G G+NL ++++ + W+ + Q Sbjct: 473 DGQTPHDERQDSINAYNEPNSTKFVFMLSTRAGGLGINL-ATADVVILYDSDWNPQVDLQ 531 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 ++R + G + V V+ I NT++E +++R K + +++ Sbjct: 532 AMDR-----AHRIGQTKTVRVFRFITDNTVEERIVERAEMKLRLDSIVIQ 576 >gi|222637545|gb|EEE67677.1| hypothetical protein OsJ_25316 [Oryza sativa Japonica Group] Length = 641 Score = 100 bits (248), Expect = 2e-19, Method: Composition-based stats. Identities = 31/165 (18%), Positives = 65/165 (39%), Gaps = 23/165 (13%) Query: 43 DEEKHWKEVHDEKIKALEVIIEKANA----APIIVAYHFNSDLARLQKAFPQGR------ 92 D + K++AL ++ ++ + + ++ F L L+ Sbjct: 454 DSSVNLDRPLSSKVQALLKLLRRSQSEDPLSKSVIFSQFRKMLILLEGPLKAAGFNILRL 513 Query: 93 ----TLDKDPCTIQEWN--EGKIP-LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQ 145 T K I+++ P +L A + G G+NL + + F WW+ + Sbjct: 514 DGSMTAKKRSEVIRQFGCVGPDSPTVLLASLKAAGAGVNLT-AASTVYLFDPWWNPGVEE 572 Query: 146 QMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 Q ++R+ + G + V V LI +++I+E +L+ K + Sbjct: 573 QAMDRV-----HRIGQTKEVKVVRLIVKDSIEERMLELQERKKKL 612 >gi|221046276|dbj|BAH14815.1| unnamed protein product [Homo sapiens] Length = 995 Score = 100 bits (248), Expect = 2e-19, Method: Composition-based stats. Identities = 42/230 (18%), Positives = 86/230 (37%), Gaps = 40/230 (17%) Query: 1 MKQY---HKFQRELYCDLQGENIEAFNSASKTVK------CLQL--ANGAVYYDEEKHW- 48 +K Y K QRE Y + ++I+ NSA K K +QL Y + Sbjct: 353 VKIYVGLSKMQREWYTRILMKDIDILNSAGKMDKMRLLNILMQLRKCCNHPYLFDGAEPG 412 Query: 49 --------KEVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQ---------KAFP 89 + K+ L+ ++ K + +++ L L+ Sbjct: 413 PPYTTDMHLVTNSGKMVVLDKLLPKLKEQGSRVLIFSQMTRVLDILEDYCMWRNYEYCRL 472 Query: 90 QGRTLDKDPCT-IQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 G+T + I +NE + + G G+NL ++++ + W+ + Q Sbjct: 473 DGQTPHDERQDSINAYNEPNSTKFVFMLSTRAGGLGINL-ATADVVILYDSDWNPQVDLQ 531 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 ++R + G + V V+ I NT++E +++R K + +++ Sbjct: 532 AMDR-----AHRIGQTKTVRVFRFITDNTVEERIVERAEMKLRLDSIVIQ 576 >gi|254389181|ref|ZP_05004410.1| SNF2/RAD54 family helicase [Streptomyces clavuligerus ATCC 27064] gi|197702897|gb|EDY48709.1| SNF2/RAD54 family helicase [Streptomyces clavuligerus ATCC 27064] Length = 964 Score = 100 bits (248), Expect = 2e-19, Method: Composition-based stats. Identities = 35/216 (16%), Positives = 75/216 (34%), Gaps = 49/216 (22%) Query: 1 MKQYHKFQR------ELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDE 54 +K + + Q+ + + +A +A+++ K Sbjct: 756 LKLFDQLQKICNAPEQFLAEPLDSTYDAERAAARSGKLA--------------------- 794 Query: 55 KIKALEVIIEKANA--APIIVAYHFNSDLARLQKA----------FPQGRTLDKDPC-TI 101 AL+ ++ + ++ + + RL F + +D I Sbjct: 795 ---ALDDLLPTLSDPDESCLIFTRYRAMARRLVHHLQGHGISPLYFSGDISAGRDRQRVI 851 Query: 102 QEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGF 161 + + + G GL L + ++ F W+ + Q I+R + G Sbjct: 852 DTFQNHPGQTMVITIKAGGTGLTLTQASH-VILFDRPWNPAKESQAIDR-----AHRLGQ 905 Query: 162 KRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 R V V+ L +NT+++ V + LR KS + D +L + Sbjct: 906 TRTVTVHQLTTENTLEDRVEELLRHKSALADAVLAS 941 >gi|194380928|dbj|BAG64032.1| unnamed protein product [Homo sapiens] Length = 995 Score = 100 bits (248), Expect = 2e-19, Method: Composition-based stats. Identities = 42/230 (18%), Positives = 86/230 (37%), Gaps = 40/230 (17%) Query: 1 MKQY---HKFQRELYCDLQGENIEAFNSASKTVK------CLQL--ANGAVYYDEEKHW- 48 +K Y K QRE Y + ++I+ NSA K K +QL Y + Sbjct: 353 VKIYVGLSKMQREWYTRILMKDIDILNSAGKMDKMRLLNILMQLRKCCNHPYLFDGAEPG 412 Query: 49 --------KEVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQ---------KAFP 89 + K+ L+ ++ K + +++ L L+ Sbjct: 413 PPYTTDMHLVTNSGKMVVLDKLLPKLKEQGSRVLIFSQMTRVLDILEDYCMWRNYEYCRL 472 Query: 90 QGRTLDKDPCT-IQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 G+T + I +NE + + G G+NL ++++ + W+ + Q Sbjct: 473 DGQTPHDERQDSINAYNEPNSTKFVFMLSTRAGGLGINL-ATADVVILYDSDWNPQVDLQ 531 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 ++R + G + V V+ I NT++E +++R K + +++ Sbjct: 532 AMDR-----AHRIGQTKTVRVFRFITDNTVEERIVERAEMKLRLDSIVIQ 576 >gi|68075951|ref|XP_679895.1| hypothetical protein [Plasmodium berghei strain ANKA] gi|56500739|emb|CAH95008.1| conserved hypothetical protein [Plasmodium berghei] Length = 1536 Score = 100 bits (248), Expect = 2e-19, Method: Composition-based stats. Identities = 29/181 (16%), Positives = 66/181 (36%), Gaps = 20/181 (11%) Query: 35 LANGAVYYDEEKHWKEVHDEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQ------- 85 L + DE + KI LE ++ + +++ L L Sbjct: 682 LCCEPIDKDEYRERLVYSSGKICLLEKLLIRLKERGNRVLIFSQMVKMLNILSEYLTLRG 741 Query: 86 ---KAFPQGRTLDKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWD 140 + T + + +N + + G G+NL + ++ + W+ Sbjct: 742 FKHQRLDGTMTKEMRKKAMNHFNSKNSDDFVFLLSTKAGGLGINLT-SADTVIIYDSDWN 800 Query: 141 LEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKK 200 + Q R + G + V +Y L+ +++I++ +L+R + K + L++ L K Sbjct: 801 PQNDLQAGAR-----AHRIGQTKTVQIYRLVTKDSIEQTILERAKVKMVLDTLVVQGLNK 855 Query: 201 E 201 + Sbjct: 856 K 856 >gi|296083594|emb|CBI23583.3| unnamed protein product [Vitis vinifera] Length = 1287 Score = 100 bits (248), Expect = 2e-19, Method: Composition-based stats. Identities = 43/177 (24%), Positives = 70/177 (39%), Gaps = 22/177 (12%) Query: 42 YDEEKHWKEVH--DEKIKALEVIIEKANAAPIIVAYHFNSDLARLQ----------KAFP 89 D EK+WKE E + LE I + IV + S L L+ + Sbjct: 1015 IDVEKNWKESSKISELLHCLERISQSRIGEKSIVFSQWTSFLDLLEIPLRRRGIGFLRYD 1074 Query: 90 QGRTLDKDPCTIQEWNE-GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMI 148 + ++E++E + +L + G GLNL N + WW+ +Q I Sbjct: 1075 GKVVQKQRERILKEFSETEEKTVLLMSLKAGGVGLNLTAASN-VFLMDPWWNPAVEEQAI 1133 Query: 149 ERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIHV 205 RI + G +R V V I ++T++E + Q K Q ++ AL E + Sbjct: 1134 MRI-----HRIGQERTVRVRRFIVKDTVEERMQQVQARK---QRMITGALTDEEVRT 1182 >gi|225680579|gb|EEH18863.1| helicase swr1 [Paracoccidioides brasiliensis Pb03] Length = 1679 Score = 100 bits (248), Expect = 2e-19, Method: Composition-based stats. Identities = 29/166 (17%), Positives = 68/166 (40%), Gaps = 19/166 (11%) Query: 44 EEKHWKEVHDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAF---------PQGR 92 +K + K++ L+ ++ ++ ++ L L++ G Sbjct: 1344 PDKRLLQYDCGKLQQLDKLLRKLQSGGHRALIFTQMTKMLDILEQFLNIHGHRYLRLDGA 1403 Query: 93 TLDKDPCTI--QEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 T + + + N+ +I S G G+NL G + ++F+ L W+ +Q +R Sbjct: 1404 TKVEQRQMLTERFNNDTRILAFILSSRSGGLGINLT-GADTVIFYDLDWNPAMDKQCQDR 1462 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + G R V +Y +++ TI+ +L++ K + D+++ Sbjct: 1463 C-----HRIGQTRDVHIYRFVSEYTIESNILRKANQKRMLDDVIIQ 1503 >gi|114596229|ref|XP_001144412.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent regulator of chromatin a5 isoform 3 [Pan troglodytes] Length = 936 Score = 100 bits (248), Expect = 2e-19, Method: Composition-based stats. Identities = 42/230 (18%), Positives = 86/230 (37%), Gaps = 40/230 (17%) Query: 1 MKQY---HKFQRELYCDLQGENIEAFNSASKTVK------CLQL--ANGAVYYDEEKHW- 48 +K Y K QRE Y + ++I+ NSA K K +QL Y + Sbjct: 294 VKIYVGLSKMQREWYTRILMKDIDILNSAGKMDKMRLLNILMQLRKCCNHPYLFDGAEPG 353 Query: 49 --------KEVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQ---------KAFP 89 + K+ L+ ++ K + +++ L L+ Sbjct: 354 PPYTTDMHLVTNSGKMVVLDKLLPKLKEQGSRVLIFSQMTRVLDILEDYCMWRNYEYCRL 413 Query: 90 QGRTLDKDPCT-IQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 G+T + I +NE + + G G+NL ++++ + W+ + Q Sbjct: 414 DGQTPHDERQDSINAYNEPNSTKFVFMLSTRAGGLGINL-ATADVVILYDSDWNPQVDLQ 472 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 ++R + G + V V+ I NT++E +++R K + +++ Sbjct: 473 AMDR-----AHRIGQTKTVRVFRFITDNTVEERIVERAEMKLRLDSIVIQ 517 >gi|226292781|gb|EEH48201.1| helicase swr1 [Paracoccidioides brasiliensis Pb18] Length = 1679 Score = 100 bits (248), Expect = 2e-19, Method: Composition-based stats. Identities = 29/166 (17%), Positives = 68/166 (40%), Gaps = 19/166 (11%) Query: 44 EEKHWKEVHDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAF---------PQGR 92 +K + K++ L+ ++ ++ ++ L L++ G Sbjct: 1344 PDKRLLQYDCGKLQQLDKLLRKLQSGGHRALIFTQMTKMLDILEQFLNIHGHRYLRLDGA 1403 Query: 93 TLDKDPCTI--QEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 T + + + N+ +I S G G+NL G + ++F+ L W+ +Q +R Sbjct: 1404 TKVEQRQMLTERFNNDTRILAFILSSRSGGLGINLT-GADTVIFYDLDWNPAMDKQCQDR 1462 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + G R V +Y +++ TI+ +L++ K + D+++ Sbjct: 1463 C-----HRIGQTRDVHIYRFVSEYTIESNILRKANQKRMLDDVIIQ 1503 >gi|149698191|ref|XP_001502076.1| PREDICTED: SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5 [Equus caballus] Length = 1052 Score = 100 bits (248), Expect = 2e-19, Method: Composition-based stats. Identities = 43/230 (18%), Positives = 88/230 (38%), Gaps = 40/230 (17%) Query: 1 MKQY---HKFQRELYCDLQGENIEAFNSASKTVK------CLQL--ANGAVYYDEEKHW- 48 +K Y K QRE Y + ++I+ NSA K K +QL Y + Sbjct: 410 VKIYVGLSKMQREWYTRILMKDIDILNSAGKMDKMRLLNILMQLRKCCNHPYLFDGAEPG 469 Query: 49 --------KEVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQ---------KAFP 89 + K+ L+ ++ K + +++ L L+ Sbjct: 470 PPYTTDMHLVTNSGKMVVLDKLLPKLKEQGSRVLIFSQMTRVLDILEDYCMWRNYEYCRL 529 Query: 90 QGRTL-DKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 G+T D+ +I +NE + + G G+NL ++++ + W+ + Q Sbjct: 530 DGQTPHDERQESINAYNEPNSTKFVFMLSTRAGGLGINL-ATADVVILYDSDWNPQVDLQ 588 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 ++R + G + V V+ I NT++E +++R K + +++ Sbjct: 589 AMDR-----AHRIGQTKTVRVFRFITDNTVEERIVERAEMKLRLDSIVIQ 633 >gi|67967643|dbj|BAE00304.1| unnamed protein product [Macaca fascicularis] Length = 644 Score = 100 bits (248), Expect = 2e-19, Method: Composition-based stats. Identities = 30/166 (18%), Positives = 65/166 (39%), Gaps = 22/166 (13%) Query: 50 EVHDEKIKALEVIIEKANA----APIIVAYHFNSDLARLQK----------AFPQGRTLD 95 E K++ L ++ + +++ ++ L LQ+ + Sbjct: 373 EKESGKLQVLSKLLAVIHELRPTEKVVLVSNYTQTLNVLQEVCKRHGYAYTRLDGQTPIS 432 Query: 96 KDPCTIQEWNE--GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGV 153 + + +N + + + G GLNL GG+ L+ + + W+ Q + R+ Sbjct: 433 QRQQIVDGFNSQHSSVFIFLLSSKAGGVGLNL-IGGSHLILYDIDWNPATDIQAMSRVW- 490 Query: 154 TRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 + G K V +Y L+ TI+E + QR +K + +++ K Sbjct: 491 ----RDGQKYPVHIYRLLTTGTIEEKIYQRQISKQGLCGAVVDLTK 532 >gi|37542688|gb|AAL47203.1| chromatin-remodeling factor CHD3 [Oryza sativa Indica Group] Length = 1111 Score = 100 bits (248), Expect = 2e-19, Method: Composition-based stats. Identities = 38/224 (16%), Positives = 77/224 (34%), Gaps = 37/224 (16%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE- 60 K Y R G ++ N ++ +L A DE + + + LE Sbjct: 555 KNYEVLTRR-----SGGHVSLINV---VMELRKLCCHAFMTDEPEEPANSEEALRRLLES 606 Query: 61 ----VIIEKA------NAAPIIVAYHFNSDLARLQKAF---------PQGRTLDKDPCT- 100 +++K +++ F L L+ G+ + Sbjct: 607 SGKMELLDKMMVKLKEQGHRVLIYSQFQHMLDLLEDYLSYRKWSYERIDGKIGGAERQIR 666 Query: 101 IQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQ 158 I +N + G G+NL + ++ + W+ Q + R + Sbjct: 667 IDRFNAKNSTRFCFLLSTRAGGLGINL-ATADTVIIYDSDWNPHADLQAMAR-----AHR 720 Query: 159 AGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKET 202 G V +Y L+++ TI+E ++Q + K ++ L++ L K T Sbjct: 721 LGQTSKVMIYRLVSRGTIEERMMQLTKKKMVLEHLVVGRLTKGT 764 >gi|209945932|gb|ACI97197.1| okra [Drosophila yakuba] Length = 168 Score = 100 bits (248), Expect = 2e-19, Method: Composition-based stats. Identities = 29/143 (20%), Positives = 58/143 (40%), Gaps = 19/143 (13%) Query: 58 ALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGR----------TLDKDPCTIQEWNEG 107 L I N +++ ++ L ++ + + ++ K + +N+ Sbjct: 33 MLAAIRADGNDKVVLI-SNYTQTLDLFEQLARKRKYGFVRLDGTMSIKKRSKVVDRFNDP 91 Query: 108 KIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 + L + G GLNL G N L F W+ +Q + R+ + G K+ Sbjct: 92 ESDSFLFMLSSKAGGCGLNL-IGANRLFMFDPDWNPANDEQAMARVW-----RDGQKKPC 145 Query: 166 FVYYLIAQNTIDELVLQRLRTKS 188 ++Y ++A +I+E +LQR K Sbjct: 146 YIYRMVASGSIEEKILQRQTHKK 168 >gi|254304002|ref|ZP_04971360.1| SWF/SNF family helicase [Fusobacterium nucleatum subsp. polymorphum ATCC 10953] gi|148324194|gb|EDK89444.1| SWF/SNF family helicase [Fusobacterium nucleatum subsp. polymorphum ATCC 10953] Length = 401 Score = 100 bits (248), Expect = 2e-19, Method: Composition-based stats. Identities = 38/167 (22%), Positives = 70/167 (41%), Gaps = 15/167 (8%) Query: 37 NGAVYYDEEKHWKEVH-----DEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQG 91 NG ++ + K + +K++ L+ A I++ Y+FN + ++K Sbjct: 231 NGIIFDNTSKVIAGLRQSAGLKDKLEYLKE-FRANTEANILIFYNFNREAREIKKIIKVD 289 Query: 92 RTLDKDPCTIQEWNEGKI---PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMI 148 + I ++++ + G G+ LQY + ++FFS W +++ Q + Sbjct: 290 FEVSGAVSNIPKFDDYDTLKGKTTLVQIQAGGAGIELQY-NSEVIFFSPTWSFQDYSQAL 348 Query: 149 ERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 R + G K V VY I + TI+E V RL K + LL Sbjct: 349 GR-----AYRIGQKNKVTVYKYIGKRTIEERVYARLDEKKDFAEKLL 390 >gi|73977786|ref|XP_867138.1| PREDICTED: similar to SWI/SNF related matrix associated actin dependent regulator of chromatin subfamily A member 5 (SWI/SNF-related matrix-associated actin-dependent regulator of chromatin A5) (Sucrose nonfermenting protein 2 homolog) (hSNF2H)... isoform 4 [Canis familiaris] Length = 1040 Score = 100 bits (248), Expect = 2e-19, Method: Composition-based stats. Identities = 43/230 (18%), Positives = 88/230 (38%), Gaps = 40/230 (17%) Query: 1 MKQY---HKFQRELYCDLQGENIEAFNSASKTVK------CLQL--ANGAVYYDEEKHW- 48 +K Y K QRE Y + ++I+ NSA K K +QL Y + Sbjct: 410 VKIYVGLSKMQREWYTRILMKDIDILNSAGKMDKMRLLNILMQLRKCCNHPYLFDGAEPG 469 Query: 49 --------KEVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQ---------KAFP 89 + K+ L+ ++ K + +++ L L+ Sbjct: 470 PPYTTDMHLVTNSGKMVVLDKLLPKLKEQGSRVLIFSQMTRVLDILEDYCMWRNYEYCRL 529 Query: 90 QGRTL-DKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 G+T D+ +I +NE + + G G+NL ++++ + W+ + Q Sbjct: 530 DGQTPHDERQESINAYNEPNSTKFVFMLSTRAGGLGINL-ATADVVILYDSDWNPQVDLQ 588 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 ++R + G + V V+ I NT++E +++R K + +++ Sbjct: 589 AMDR-----AHRIGQTKTVRVFRFITDNTVEERIVERAEMKLRLDSIVIQ 633 >gi|302792356|ref|XP_002977944.1| hypothetical protein SELMODRAFT_408 [Selaginella moellendorffii] gi|300154647|gb|EFJ21282.1| hypothetical protein SELMODRAFT_408 [Selaginella moellendorffii] Length = 835 Score = 100 bits (248), Expect = 2e-19, Method: Composition-based stats. Identities = 35/155 (22%), Positives = 58/155 (37%), Gaps = 23/155 (14%) Query: 52 HDEKIKALEVIIEKANAA----PIIVAYHFNSDLARLQKAFPQGRTL----------DKD 97 KI AL I++K A +V F+S L + Q K Sbjct: 680 SSAKITALLSILDKTRAKDPSIKTVVFSQFSSMLKLAEAPLTQAGYKFVKLQGGMSAKKR 739 Query: 98 PCTIQEWNEGKIP---LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 ++ + + + G GLNL N +V WW+ +Q ++R+ Sbjct: 740 DEAMEAFKSRSKDSPTVFLLSLKAAGVGLNLVSASN-VVMLDPWWNPAAEEQAMDRV--- 795 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKST 189 + G R V V+ L+A ++I+E +LQ K Sbjct: 796 --HRLGQTRDVHVFRLVATDSIEERLLQMQEKKRA 828 >gi|307180292|gb|EFN68325.1| Lymphoid-specific helicase [Camponotus floridanus] Length = 773 Score = 100 bits (248), Expect = 2e-19, Method: Composition-based stats. Identities = 26/158 (16%), Positives = 61/158 (38%), Gaps = 19/158 (12%) Query: 52 HDEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQKAF---------PQGRTL--DKDP 98 K+ L+ ++ K + +++ L ++ GR ++ Sbjct: 561 SSGKLLVLDAMLAKLHARGHKVLLFSTMTMILDMIEDYLSLRDYNYVRLDGRIKIEERKE 620 Query: 99 CTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQ 158 N+ + L + G GLNL + ++ + W+ + Q + R + Sbjct: 621 NIKTFNNDPNVFLFLISTRAGGVGLNL-ASADTVIIYDSDWNPQADIQAMARC-----HR 674 Query: 159 AGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 G + V VY L + T+DE +++R K ++ ++++ Sbjct: 675 IGQTKPVVVYRLCTRGTVDETIIKRSEAKRILEKVVIS 712 >gi|298714024|emb|CBJ27256.1| probable chromatin remodelling complex ATPase chain [Ectocarpus siliculosus] Length = 1563 Score = 100 bits (248), Expect = 2e-19, Method: Composition-based stats. Identities = 28/153 (18%), Positives = 60/153 (39%), Gaps = 19/153 (12%) Query: 56 IKALEVIIEKANAAPIIVAYHFNSDLARLQKAF---------PQGRTLDKDPCT-IQEWN 105 + L ++ A ++V + L+ G T I+E+N Sbjct: 575 LDKLLTRLKAA-GHRVLVFSQMTRMMDILEDLMHMREYKYCRIDGNTPHDTRQDLIEEYN 633 Query: 106 EG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKR 163 + + + G G+NLQ + + + W+ + Q +R + G + Sbjct: 634 APGSEKFIFLLSTRAGGLGINLQ-SADTCILYDSDWNPQADLQAQDRC-----HRIGQTK 687 Query: 164 AVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 V VY L+ ++TI+E V++R + K + +++ Sbjct: 688 TVKVYRLVTEDTIEEKVVERAQQKLKLDAMVVQ 720 >gi|195058262|ref|XP_001995418.1| GH23147 [Drosophila grimshawi] gi|193899624|gb|EDV98490.1| GH23147 [Drosophila grimshawi] Length = 1025 Score = 100 bits (248), Expect = 2e-19, Method: Composition-based stats. Identities = 44/225 (19%), Positives = 89/225 (39%), Gaps = 37/225 (16%) Query: 6 KFQRELYCDLQGENIEAFNSASKTVK------CLQL---ANGAVYYD--EEKHWKEVHDE 54 K QR+ Y + ++I+ N A K K +QL N +D E Sbjct: 366 KMQRDWYTKVLLKDIDIVNGAGKVEKMRLQNILMQLRKCTNHPYLFDGAEPGPPYTTDSH 425 Query: 55 ------KIKALEVIIEKAN--AAPIIVAYHFNSDLARLQ---------KAFPQGRTLDKD 97 K+ L+ ++ K + +++ L L+ G+T +D Sbjct: 426 LVYNSGKMAILDKLLPKLQEQGSRVLIFSQMTRMLDILEDYCHWRNYNYCRLDGQTPHED 485 Query: 98 P-CTIQEWN--EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 IQE+N L + G G+NL ++++ + W+ + Q ++R Sbjct: 486 RNRQIQEFNMDNSTKFLFMLSTRAGGLGINL-ATADVVIIYDSDWNPQMDLQAMDR---- 540 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 + G K+ V V+ LI ++T++E +++R K + +++ + Sbjct: 541 -AHRIGQKKQVRVFRLITESTVEEKIVERAEVKLRLDKMVIQGGR 584 >gi|317156009|ref|XP_001825512.2| helicase swr1 [Aspergillus oryzae RIB40] Length = 1662 Score = 100 bits (248), Expect = 2e-19, Method: Composition-based stats. Identities = 30/166 (18%), Positives = 67/166 (40%), Gaps = 19/166 (11%) Query: 44 EEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAF---------PQGR 92 +K + K++ L+ ++ A ++ L L++ G Sbjct: 1337 PDKRLLQYDCGKLQRLDKLLRDLKAGGHRALIFTQMTKMLDILEQFLNIHGHRYLRLDGT 1396 Query: 93 TLDKDPCTI--QEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 T + + + N+ +I S G G+NL G + ++F+ L W+ +Q +R Sbjct: 1397 TKVEQRQILTDRFNNDSRILAFILSSRSGGLGINLT-GADTVIFYDLDWNPAMDKQCQDR 1455 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + G R V +Y +++ TI+ +L++ K + D+++ Sbjct: 1456 C-----HRIGQTRDVHIYRFVSEYTIESNILRKANQKRMLDDVVIQ 1496 >gi|307177261|gb|EFN66439.1| DNA repair and recombination protein RAD54B [Camponotus floridanus] Length = 845 Score = 100 bits (248), Expect = 2e-19, Method: Composition-based stats. Identities = 35/152 (23%), Positives = 68/152 (44%), Gaps = 17/152 (11%) Query: 56 IKALEVIIEKANAAPIIVAYHF-NSDL-------ARLQKAFPQGRTLD-KDPCTIQEWN- 105 ++ L ++K + ++V+Y+ DL L+ G I+++N Sbjct: 599 LQVLMRNLKKTDEKLVLVSYYTQTLDLFETICNIEELKFLRLDGTISSSTRSKIIEQFNT 658 Query: 106 -EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA 164 +L + G GLNL G + LV F W+ Q + RI + G K+ Sbjct: 659 RSDNSKILLLSAKAGGVGLNL-PGASRLVLFDSDWNPASDVQAMARIW-----RDGQKKN 712 Query: 165 VFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 V++Y L+ TI+E + QR +K+++ + +++ Sbjct: 713 VYIYRLLTTGTIEEKIYQRQISKASLSESVVD 744 >gi|121709100|ref|XP_001272308.1| SNF2 family helicase/ATPase (Swr1), putative [Aspergillus clavatus NRRL 1] gi|119400457|gb|EAW10882.1| SNF2 family helicase/ATPase (Swr1), putative [Aspergillus clavatus NRRL 1] Length = 1687 Score = 100 bits (248), Expect = 2e-19, Method: Composition-based stats. Identities = 30/166 (18%), Positives = 67/166 (40%), Gaps = 19/166 (11%) Query: 44 EEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAF---------PQGR 92 +K + K++ L+ ++ A ++ L L++ G Sbjct: 1358 PDKRLLQYDCGKLQRLDKLLRDLKAGGHRALIFTQMTKMLDILEQFLNIHGHRYLRLDGT 1417 Query: 93 TLDKDPCTI--QEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 T + + + N+ +I S G G+NL G + ++F+ L W+ +Q +R Sbjct: 1418 TKVEQRQILTDRFNNDDRILAFILSSRSGGLGINLT-GADTVIFYDLDWNPAMDKQCQDR 1476 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + G R V +Y +++ TI+ +L++ K + D+++ Sbjct: 1477 C-----HRIGQTRDVHIYRFVSEYTIESNILRKANQKRLLDDVVIQ 1517 >gi|19115879|ref|NP_594967.1| ATP-dependent DNA helicase Hrp3 [Schizosaccharomyces pombe 972h-] gi|15214050|sp|O14139|HRP3_SCHPO RecName: Full=Chromodomain helicase hrp3; AltName: Full=ATP-dependent helicase hrp3 gi|2408073|emb|CAB16277.1| ATP-dependent DNA helicase Hrp3 [Schizosaccharomyces pombe] Length = 1388 Score = 100 bits (248), Expect = 2e-19, Method: Composition-based stats. Identities = 31/159 (19%), Positives = 67/159 (42%), Gaps = 20/159 (12%) Query: 52 HDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARL-----QKAFPQGRTLDKDPCTIQE- 103 + K+ L+ ++ + + +++ L L + +P R P ++ Sbjct: 688 NSGKMVLLDKLLSRLRRDGHRVLIFSQMVRMLDILGDYLSLRGYPHQRLDGTVPAAVRRT 747 Query: 104 ----WNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 +N P + + G G+NL + ++ F W+ + Q + R Sbjct: 748 SIDHFNAPNSPDFVFLLSTRAGGLGINLMT-ADTVIIFDSDWNPQADLQAMAR-----AH 801 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + G K V VY L++++TI+E VL+R R K ++ +++ Sbjct: 802 RIGQKNHVMVYRLLSKDTIEEDVLERARRKMILEYAIIS 840 >gi|321257722|ref|XP_003193686.1| DNA recombination and repair protein Rad54B [Cryptococcus gattii WM276] gi|317460156|gb|ADV21899.1| DNA recombination and repair protein Rad54B, putative [Cryptococcus gattii WM276] Length = 818 Score = 100 bits (248), Expect = 2e-19, Method: Composition-based stats. Identities = 33/161 (20%), Positives = 62/161 (38%), Gaps = 18/161 (11%) Query: 56 IKALEVIIEKANAAPIIVAYHFNSDLARLQK----------AFPQGRTLDKDPCTIQEWN 105 ++ + I+ I++ + L ++K ++ K + ++N Sbjct: 581 LERMLDHIKHHTNDKIVLISNATQTLDLMEKLCRSKRYGYLRLDGSMSVPKRSKIVAQFN 640 Query: 106 --EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKR 163 E K + + G G+NL G N LV F W+ QQ + R+ + G K+ Sbjct: 641 QPESKEFVFLLSSKAGGCGINL-IGANRLVLFDPDWNPASDQQALARVW-----RDGQKK 694 Query: 164 AVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIH 204 FVY TI+E + QR K + +++ + H Sbjct: 695 ECFVYRFQTTGTIEEKIFQRQCQKQNLSACVVDEAEDTARH 735 >gi|255565952|ref|XP_002523964.1| TATA-binding protein-associated factor MOT1, putative [Ricinus communis] gi|223536691|gb|EEF38332.1| TATA-binding protein-associated factor MOT1, putative [Ricinus communis] Length = 1920 Score = 100 bits (248), Expect = 2e-19, Method: Composition-based stats. Identities = 34/175 (19%), Positives = 67/175 (38%), Gaps = 35/175 (20%) Query: 52 HDEKIKALEVIIEK---------------ANAAPIIVAYHFNSDLARLQK---------- 86 H K+ AL+ I+E+ +++ + L +++ Sbjct: 1671 HSPKLVALQEILEECGIGVDISSSENAVNVGQHRVLIFAQHKALLDIIERDLFHSHMKNV 1730 Query: 87 ---AFPQGRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLE 142 +K ++ +N + I L G GLNL + LVF W+ Sbjct: 1731 TYLRLDGSVEPEKRFDIVKAFNSDPTIDALLLTTHVGGLGLNLT-SADTLVFMEHDWNPM 1789 Query: 143 EHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 Q ++R + G K+ V V+ LI + T++E V+ + K ++ + ++NA Sbjct: 1790 RDHQAMDR-----AHRLGQKKVVNVHRLIMRGTLEEKVMSLQKFKVSVANAVINA 1839 >gi|225436245|ref|XP_002275285.1| PREDICTED: hypothetical protein [Vitis vinifera] Length = 2052 Score = 100 bits (248), Expect = 2e-19, Method: Composition-based stats. Identities = 33/175 (18%), Positives = 68/175 (38%), Gaps = 35/175 (20%) Query: 52 HDEKIKALEVIIEK---------ANA------APIIVAYHFNSDLARLQK---------- 86 H K+ AL I+E+ + +++ + L +++ Sbjct: 1803 HSPKLIALHEILEECGIGVDASSSEGAVSVGQHRVLIFAQHKAFLDIIERDLFHTHMKSV 1862 Query: 87 ---AFPQGRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLE 142 +K ++ +N + I +L G GLNL + LVF W+ Sbjct: 1863 TYLRLDGSVEPEKRFEIVKAFNSDPTIDVLLLTTHVGGLGLNLT-SADTLVFMEHDWNPM 1921 Query: 143 EHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 Q ++R + G ++ V V+ LI + T++E V+ R K ++ + ++N+ Sbjct: 1922 RDHQAMDR-----AHRLGQRKVVNVHRLIMRGTLEEKVMSLQRFKLSVANSVINS 1971 >gi|238498954|ref|XP_002380712.1| SNF2 family helicase/ATPase (Swr1), putative [Aspergillus flavus NRRL3357] gi|220693986|gb|EED50331.1| SNF2 family helicase/ATPase (Swr1), putative [Aspergillus flavus NRRL3357] Length = 1662 Score = 100 bits (248), Expect = 2e-19, Method: Composition-based stats. Identities = 30/166 (18%), Positives = 67/166 (40%), Gaps = 19/166 (11%) Query: 44 EEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAF---------PQGR 92 +K + K++ L+ ++ A ++ L L++ G Sbjct: 1337 PDKRLLQYDCGKLQRLDKLLRDLKAGGHRALIFTQMTKMLDILEQFLNIHGHRYLRLDGT 1396 Query: 93 TLDKDPCTI--QEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 T + + + N+ +I S G G+NL G + ++F+ L W+ +Q +R Sbjct: 1397 TKVEQRQILTDRFNNDSRILAFILSSRSGGLGINLT-GADTVIFYDLDWNPAMDKQCQDR 1455 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + G R V +Y +++ TI+ +L++ K + D+++ Sbjct: 1456 C-----HRIGQTRDVHIYRFVSEYTIESNILRKANQKRMLDDVVIQ 1496 >gi|298705975|emb|CBJ29096.1| SNF2 family protein [Ectocarpus siliculosus] Length = 1288 Score = 100 bits (248), Expect = 2e-19, Method: Composition-based stats. Identities = 30/175 (17%), Positives = 65/175 (37%), Gaps = 21/175 (12%) Query: 42 YDEEKHWKEVHDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQK----------AFP 89 D + + K+ L+ I+ +++ L+ +++ Sbjct: 758 SDNDHEVQR--SGKLLVLQQILPLWHKQGHRVLLFSQTRQMLSIIERFVVNNEWSYGRLD 815 Query: 90 QGRTLDKDPCTIQEWNEGK-IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMI 148 + I +N + + ++ + G G+NL G + ++ F W+ Q Sbjct: 816 GSTPVGNRQTLIDRFNNDESMFIMLLTTRTGGVGVNLT-GADRVILFDPDWNPSTDMQAR 874 Query: 149 ERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETI 203 ER + G +R V VY L+ TI+E + R K+ + + +L K+ + Sbjct: 875 ERSW-----RVGQRRQVTVYRLVTAGTIEEKIYHRQIFKTALTNRVLQDPKQRRM 924 >gi|303315667|ref|XP_003067838.1| SNF2 family N-terminal domain containing protein [Coccidioides posadasii C735 delta SOWgp] gi|240107514|gb|EER25693.1| SNF2 family N-terminal domain containing protein [Coccidioides posadasii C735 delta SOWgp] Length = 1213 Score = 100 bits (248), Expect = 2e-19, Method: Composition-based stats. Identities = 30/163 (18%), Positives = 59/163 (36%), Gaps = 20/163 (12%) Query: 53 DEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQK-----------AFPQGRTLDKDPC 99 K++ ++ ++E + ++ L L+K + Sbjct: 752 SGKMQVVKALLELWRDTGHKTLLFAQHRIMLDILEKFIKSLTGFNYRRMDGNTPIKVRQG 811 Query: 100 TIQEWNE-GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQ 158 + E+N I + G G+NL G + ++ + W+ Q ER + Sbjct: 812 MVDEFNNDPDIHVFLLTTKVGGLGVNLT-GADRVIIYDPDWNPSTDLQARERAW-----R 865 Query: 159 AGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 G KR V +Y L+ TI+E + R K + + +L K+ Sbjct: 866 LGQKRDVTIYRLMTAGTIEEKIYHRQIFKQFLTNKILKDPKQR 908 >gi|302794214|ref|XP_002978871.1| hypothetical protein SELMODRAFT_109740 [Selaginella moellendorffii] gi|300153189|gb|EFJ19828.1| hypothetical protein SELMODRAFT_109740 [Selaginella moellendorffii] Length = 587 Score = 100 bits (248), Expect = 2e-19, Method: Composition-based stats. Identities = 29/171 (16%), Positives = 65/171 (38%), Gaps = 19/171 (11%) Query: 33 LQLANGAVYYDEEKHWKEV-HDEKIKALEVIIEKA-NAAPIIVAYHFNSDLARLQKAFPQ 90 LQL + ++ +E+ K+KA +++ + ++ + S L ++ + Sbjct: 392 LQLEAQERQEEFDRKVQEIGQSAKLKAAMRVLDMTPHGEKSLIFSQWTSMLDLIEPELEE 451 Query: 91 G-----------RTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWW 139 T + + + ++ ++ + G GLNL ++ +WW Sbjct: 452 AGIQFSRIDGSMSTRKRVEAIKRFSEDPEVAVMLISLRAGGCGLNL-VAATRVLLMDMWW 510 Query: 140 DLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 + Q I+R + G R V V + + T++E +LQ K + Sbjct: 511 NPTTEDQAIDR-----THRIGQTRPVHVTRFVVKQTVEERILQIQEEKKKL 556 >gi|296090211|emb|CBI40030.3| unnamed protein product [Vitis vinifera] Length = 1884 Score = 100 bits (248), Expect = 2e-19, Method: Composition-based stats. Identities = 33/175 (18%), Positives = 68/175 (38%), Gaps = 35/175 (20%) Query: 52 HDEKIKALEVIIEK---------ANA------APIIVAYHFNSDLARLQK---------- 86 H K+ AL I+E+ + +++ + L +++ Sbjct: 1635 HSPKLIALHEILEECGIGVDASSSEGAVSVGQHRVLIFAQHKAFLDIIERDLFHTHMKSV 1694 Query: 87 ---AFPQGRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLE 142 +K ++ +N + I +L G GLNL + LVF W+ Sbjct: 1695 TYLRLDGSVEPEKRFEIVKAFNSDPTIDVLLLTTHVGGLGLNLT-SADTLVFMEHDWNPM 1753 Query: 143 EHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 Q ++R + G ++ V V+ LI + T++E V+ R K ++ + ++N+ Sbjct: 1754 RDHQAMDR-----AHRLGQRKVVNVHRLIMRGTLEEKVMSLQRFKLSVANSVINS 1803 >gi|115727574|ref|XP_001176374.1| PREDICTED: similar to SWI/SNF-related matrix-associated actin-dependent regulator of chromatin a5 isoform 1 [Strongylocentrotus purpuratus] gi|115939382|ref|XP_001175986.1| PREDICTED: similar to SWI/SNF-related matrix-associated actin-dependent regulator of chromatin a5 isoform 1 [Strongylocentrotus purpuratus] Length = 1031 Score = 100 bits (248), Expect = 2e-19, Method: Composition-based stats. Identities = 44/242 (18%), Positives = 92/242 (38%), Gaps = 54/242 (22%) Query: 2 KQY---HKFQRELYCDLQGENIEAFNSASKTVK---------CLQLANGAVYYD------ 43 K Y QRE Y + ++I+ N A K+ K + N +D Sbjct: 368 KMYVGMSIMQREWYTKILMKDIDVVNGAGKSDKMRLMNILMHLRKCGNHPYLFDGAEPGP 427 Query: 44 ---EEKHWKEVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQ---------KAFP 89 +KH E + K+ L+ ++ K + +++ L L+ Sbjct: 428 PYTTDKHLVE-NSGKMSVLDKLLPKLKEQGSRVLIFSQMTRLLDILEDYCVWRGHNYCRL 486 Query: 90 QGRTLDKDPCT-------------IQEWN--EGKIPLLFAHPASCGHGLNLQYGGNILVF 134 G+T + I +N + + + + G G+NL +I+V Sbjct: 487 DGQTPHAERQVSRLPMPCSHSQESINNFNMPDSEKFVFLLSTRAGGLGINL-ATADIVVL 545 Query: 135 FSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 + W+ + Q ++R + G K+ V V+ I++NT++E +++R K + +++ Sbjct: 546 YDSDWNPQVDLQAMDR-----AHRIGQKKQVHVFRFISENTVEERIVERAEMKLRLDNIV 600 Query: 195 LN 196 + Sbjct: 601 IQ 602 >gi|281337316|gb|EFB12900.1| hypothetical protein PANDA_013661 [Ailuropoda melanoleuca] Length = 912 Score = 99.6 bits (247), Expect = 2e-19, Method: Composition-based stats. Identities = 43/230 (18%), Positives = 88/230 (38%), Gaps = 40/230 (17%) Query: 1 MKQY---HKFQRELYCDLQGENIEAFNSASKTVK------CLQL--ANGAVYYDEEKHW- 48 +K Y K QRE Y + ++I+ NSA K K +QL Y + Sbjct: 327 VKIYVGLSKMQREWYTRILMKDIDILNSAGKMDKMRLLNILMQLRKCCNHPYLFDGAEPG 386 Query: 49 --------KEVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQ---------KAFP 89 + K+ L+ ++ K + +++ L L+ Sbjct: 387 PPYTTDMHLVTNSGKMVVLDKLLPKLKEQGSRVLIFSQMTRVLDILEDYCMWRNYEYCRL 446 Query: 90 QGRTL-DKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 G+T D+ +I +NE + + G G+NL ++++ + W+ + Q Sbjct: 447 DGQTPHDERQESINAYNEPNSTKFVFMLSTRAGGLGINL-ATADVVILYDSDWNPQVDLQ 505 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 ++R + G + V V+ I NT++E +++R K + +++ Sbjct: 506 AMDR-----AHRIGQTKTVRVFRFITDNTVEERIVERAEMKLRLDSIVIQ 550 >gi|294951977|ref|XP_002787191.1| hypothetical protein Pmar_PMAR025719 [Perkinsus marinus ATCC 50983] gi|239901899|gb|EER18987.1| hypothetical protein Pmar_PMAR025719 [Perkinsus marinus ATCC 50983] Length = 893 Score = 99.6 bits (247), Expect = 2e-19, Method: Composition-based stats. Identities = 28/166 (16%), Positives = 68/166 (40%), Gaps = 19/166 (11%) Query: 44 EEKHWKEVHDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAF----------PQG 91 ++ E K++ L ++ + IV + L ++ + Sbjct: 721 PDRDMIERDCGKMRKLGELLTTLRDGGHKCIVFTQMSKMLDIIEASMNLHGFTYVRLDGS 780 Query: 92 RTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 + + ++ +N KI A + G G+NL G + ++F+ W+ +Q ++R Sbjct: 781 TPVLRRQLVVEAFNKSPKIFAFIASTRAGGVGINLT-GADCVIFYDSDWNPAMDRQAMDR 839 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + G R V ++ L++ +TI+E + + K + D++++ Sbjct: 840 C-----HRIGQTRDVHIFRLLSHHTIEENIFHKQLQKRMLDDVVVD 880 >gi|224126033|ref|XP_002319739.1| chromatin remodeling complex subunit [Populus trichocarpa] gi|222858115|gb|EEE95662.1| chromatin remodeling complex subunit [Populus trichocarpa] Length = 2045 Score = 99.6 bits (247), Expect = 2e-19, Method: Composition-based stats. Identities = 34/175 (19%), Positives = 67/175 (38%), Gaps = 35/175 (20%) Query: 52 HDEKIKALEVIIEK---------------ANAAPIIVAYHFNSDLARLQK---------- 86 H K+ AL+ I+E+ +++ + L +++ Sbjct: 1796 HSPKLVALQEILEECGIGVDASSSDNAVSVGQHRVLIFAQHKALLDIIERDLFHSQMKNV 1855 Query: 87 ---AFPQGRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLE 142 +K ++ +N + I L G GLNL + LVF W+ Sbjct: 1856 TYLRLDGSVEPEKRFDIVKAFNSDPTIDALLLTTHVGGLGLNLT-SADTLVFMEHDWNPM 1914 Query: 143 EHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 Q ++R + G K+ V V+ LI + T++E V+ + K ++ + ++NA Sbjct: 1915 RDLQAMDR-----AHRLGQKKVVNVHRLIMRGTLEEKVMSLQKFKVSVANAVINA 1964 >gi|256072692|ref|XP_002572668.1| chromodomain helicase DNA binding protein [Schistosoma mansoni] gi|238657831|emb|CAZ28900.1| chromodomain helicase DNA binding protein, putative [Schistosoma mansoni] Length = 1958 Score = 99.6 bits (247), Expect = 2e-19, Method: Composition-based stats. Identities = 27/158 (17%), Positives = 58/158 (36%), Gaps = 20/158 (12%) Query: 53 DEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQKAFPQGRTLDKD----------PCT 100 K+ L ++ + +++ F L L++ R T Sbjct: 802 SSKLVVLMELLRGLFVDDHRVLIFSRFTMMLDLLEQVMINARYKYVRIDGRVRGPLRQVT 861 Query: 101 IQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQ 158 I +N + + G G+NL + +V + W+ + Q + R + Sbjct: 862 IDRFNAPDSEYFIFLLSTRAGGEGINL-ASADTVVLYDSDWNPQWDLQALSR-----AHR 915 Query: 159 AGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 G + V +Y I +++I+E + Q R K + L+++ Sbjct: 916 IGQSKHVVIYRFITRHSIEEKISQVARRKLALTQLIVD 953 >gi|168015457|ref|XP_001760267.1| SNF2 superfamily RAD5 protein [Physcomitrella patens subsp. patens] gi|162688647|gb|EDQ75023.1| SNF2 superfamily RAD5 protein [Physcomitrella patens subsp. patens] Length = 1031 Score = 99.6 bits (247), Expect = 2e-19, Method: Composition-based stats. Identities = 34/177 (19%), Positives = 67/177 (37%), Gaps = 24/177 (13%) Query: 42 YDEEKHWKEVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQKAFPQGRTL----- 94 D E +W K+ AL +E+ + A +V + + L L+ F + + Sbjct: 855 VDVEANW--TDSCKVNALMNELEELRPSGAKSVVFSQWTAFLDLLEIPFKRKKIKFVRLD 912 Query: 95 -----DKDPCTIQEWNE-GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMI 148 + + ++ I ++ + G G+NL N + WW+ +Q I Sbjct: 913 GSLSQQQREKVLNDFRSQSDIMVMLISLKAGGVGINLTTASNAFLL-DPWWNPAVEEQAI 971 Query: 149 ERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIHV 205 RI + G + V V I + +++E + K Q ++ AL + + V Sbjct: 972 MRI-----HRIGQTKDVQVKRFIVKGSVEEKMQAVQARK---QRMIAGALNNQEVRV 1020 >gi|321252272|ref|XP_003192348.1| hypothetical protein CGB_B6660W [Cryptococcus gattii WM276] gi|317458816|gb|ADV20561.1| Hypothetical protein CGB_B6660W [Cryptococcus gattii WM276] Length = 1283 Score = 99.6 bits (247), Expect = 2e-19, Method: Composition-based stats. Identities = 46/183 (25%), Positives = 74/183 (40%), Gaps = 32/183 (17%) Query: 33 LQLANGAVYYDEEKHWKEVHDEKIKALEV----IIEKANAAPIIVAYHFNSDLARLQKAF 88 LQ N V ++ + K+K L IIE+ + IIV F + L F Sbjct: 1085 LQDVNDEVLIED-----VLPSTKMKKLGELIDAIIEQDPSQKIIVFSQFVEYID-LCSIF 1138 Query: 89 PQGRTL-----------DKDPCTIQEWN----EGKIP-LLFAHPASCGHGLNLQYGGNIL 132 + R + D+ TI+ +N E K P L G GLNL N + Sbjct: 1139 LRRRNIPHAKYVGSMKQDEREDTIKNFNRPMEEDKSPRCLLMSLKCGGVGLNLCI-ANHV 1197 Query: 133 VFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQD 192 + L W+ Q ++R + G R V V+ L+ +NTID+ +++ + K + D Sbjct: 1198 ICLDLAWNAATENQAVDR-----AHRIGQTREVVVHRLVVENTIDQRLMELQQQKQALSD 1252 Query: 193 LLL 195 + Sbjct: 1253 GAM 1255 >gi|316965584|gb|EFV50276.1| 7 transmembrane receptor [Trichinella spiralis] Length = 2083 Score = 99.6 bits (247), Expect = 2e-19, Method: Composition-based stats. Identities = 34/168 (20%), Positives = 60/168 (35%), Gaps = 24/168 (14%) Query: 39 AVYYDEEKHWKEVHDEKIKALEVIIE----KANAAPIIVAYHFNSDLARLQK-------- 86 A + D + K+ L ++E + A ++VA +F L ++ Sbjct: 1826 ACFTDVG--VRVGDSGKLTVLAQLLELVRRQYPAEKVVVASNFTESLNIIESYCNGMGFS 1883 Query: 87 --AFPQGRTLDKDPCTIQEWNE--GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLE 142 + + +N L + G GLNL N LV + W+ Sbjct: 1884 SFRLDGSTDVSSRQRMVDRFNTTTDDTFLFLLSTKAGGMGLNLT-AANRLVLYDCDWNPA 1942 Query: 143 EHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 +Q + RI + G +R +Y L+ +I+E + QR K I Sbjct: 1943 YDRQAMARIW-----RDGQRRVCHIYRLLTTGSIEENIFQRQIRKDDI 1985 >gi|84043448|ref|XP_951514.1| transcription activator [Trypanosoma brucei TREU927] gi|33348313|gb|AAQ15639.1| transcription activator, putative [Trypanosoma brucei brucei strain 927/4 GUTat10.1] gi|62359085|gb|AAX79532.1| transcription activator, putative [Trypanosoma brucei] gi|261326368|emb|CBH09327.1| transcription activator, putative [Trypanosoma brucei gambiense DAL972] Length = 1160 Score = 99.6 bits (247), Expect = 2e-19, Method: Composition-based stats. Identities = 29/150 (19%), Positives = 58/150 (38%), Gaps = 20/150 (13%) Query: 64 EKANAAPIIVAYHFNSDLARLQ-----KAFPQGRT------LDKDPCTIQEWNEGKIP-- 110 ++ +++ F S L L+ + F R D+D + +N K Sbjct: 495 DEKEGHKVLIFSQFTSMLDILEDYCSMRGFKVCRIDGSTSGYDRDSQ-MAAFNAPKSDYF 553 Query: 111 LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYL 170 + + G G+NLQ N+++ + W+ + Q R + G KR V VY Sbjct: 554 IFLLSTRAGGLGINLQAANNVII-YDSDWNPQMDLQA-----QDRAHRIGQKRVVRVYRF 607 Query: 171 IAQNTIDELVLQRLRTKSTIQDLLLNALKK 200 + T++E + R K + +++ + Sbjct: 608 VTDGTVEERIYHRALKKLYLDAMVVQQGRA 637 >gi|156847261|ref|XP_001646515.1| hypothetical protein Kpol_1055p13 [Vanderwaltozyma polyspora DSM 70294] gi|156117193|gb|EDO18657.1| hypothetical protein Kpol_1055p13 [Vanderwaltozyma polyspora DSM 70294] Length = 1552 Score = 99.6 bits (247), Expect = 2e-19, Method: Composition-based stats. Identities = 28/166 (16%), Positives = 71/166 (42%), Gaps = 19/166 (11%) Query: 44 EEKHWKEVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQKAF---------PQGR 92 +K + K++ L +++++ N ++ L L++ G Sbjct: 1275 PDKSLLQYDCGKLQKLAILLQQLKDNGHRALIFTQMTKVLDILEQFLNYHGYLYMRLDGA 1334 Query: 93 TLDKDPCTI--QEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 T +D + + N+ ++ + S G G+NL G + ++F+ W+ +Q +R Sbjct: 1335 TKIEDRQILTERFNNDPRVTVFILSSRSGGLGINLT-GADTVIFYDSDWNPAMDKQCQDR 1393 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + G R V +Y ++++TI+ +L++ K + ++++ Sbjct: 1394 C-----HRIGQTRDVHIYRFVSEHTIESNILKKANQKRQLDNVIIQ 1434 >gi|156087380|ref|XP_001611097.1| snf2-related chromatin remodeling factor SRCAP [Babesia bovis T2Bo] gi|154798350|gb|EDO07529.1| snf2-related chromatin remodeling factor SRCAP [Babesia bovis] Length = 1675 Score = 99.6 bits (247), Expect = 2e-19, Method: Composition-based stats. Identities = 32/166 (19%), Positives = 67/166 (40%), Gaps = 19/166 (11%) Query: 44 EEKHWKEVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQK----------AFPQG 91 ++ K L ++ K ++ F+ L L+ Sbjct: 1350 PPRNLLHDDCGKFLVLGNLLNKLKNEGHRCLLYTQFSKMLDILENWINLMGFTYIRLDGS 1409 Query: 92 RTLDKDPCTIQEWNEG-KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 +D + +NE KI L + + G GL L G + ++F+ W+ +Q ++R Sbjct: 1410 TKVDMRQRIVTRFNENQKIFLFISSTRAGGVGLTLT-GADTVIFYDTDWNPAMDRQAMDR 1468 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + G R V VY LI+++T++E + ++ K + D++++ Sbjct: 1469 C-----HRIGQTREVNVYRLISEHTVEENIWRKQLQKRRLDDIVVD 1509 >gi|293418289|gb|ABY48151.3| Mot1 [Triticum monococcum subsp. aegilopoides] Length = 2069 Score = 99.6 bits (247), Expect = 2e-19, Method: Composition-based stats. Identities = 34/175 (19%), Positives = 69/175 (39%), Gaps = 35/175 (20%) Query: 52 HDEKIKALEVIIEK---------------ANAAPIIVAYHFNSDLARLQK---------- 86 H K+ AL+ I+++ +++ + L ++K Sbjct: 1820 HSPKLVALQEILQECGIGSEISSPDASAAVGQHRVLIFAQHKAFLDIIEKDLFQSHMRSV 1879 Query: 87 ---AFPQGRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLE 142 DK ++ +N + I +L G GLNL + LVF W+ Sbjct: 1880 TYLRLDGSVQTDKRFEIVKTFNSDPTIDVLLLTTHVGGLGLNLT-SADTLVFMEHDWNPM 1938 Query: 143 EHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + Q ++R + G ++ V V+ LI + T++E V+ R K ++ + ++N+ Sbjct: 1939 KDLQAMDR-----AHRLGQRKVVNVHRLIMRGTLEEKVMSLQRFKVSVANAVINS 1988 >gi|68073367|ref|XP_678598.1| DNA repair protein rhp16 [Plasmodium berghei strain ANKA] gi|56499117|emb|CAH97553.1| DNA repair protein rhp16, putative [Plasmodium berghei] Length = 1545 Score = 99.6 bits (247), Expect = 2e-19, Method: Composition-based stats. Identities = 33/172 (19%), Positives = 65/172 (37%), Gaps = 30/172 (17%) Query: 52 HDEKIKALEVIIEK------ANAAPIIVAYHFNSDLARLQKAFPQGRTL----------- 94 KI+A I E+ ++ + S L ++ + + Sbjct: 1373 TSTKIEA---IFEEVRNVIYNTDDKCLIFSQYCSMLDLIEYHLKKNNIICSKLLGYMSMV 1429 Query: 95 DKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 ++ N+ ++ +L + G GLNLQ N + WW+ Q I+R Sbjct: 1430 SRNNILYNFNNDNQLRVLLISLKAGGEGLNLQV-ANRIFIVDPWWNPAAELQAIQR---- 1484 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL----NALKKET 202 + G + V+ I +NT++E ++Q K + D + +A++K T Sbjct: 1485 -AHRIGQTKTVYAIRFIIENTVEEKIIQLQNKKQLVFDCTIGNSGSAMQKLT 1535 >gi|293417053|gb|ACU00616.1| Mot1 protein [Triticum monococcum subsp. monococcum] Length = 2069 Score = 99.6 bits (247), Expect = 2e-19, Method: Composition-based stats. Identities = 34/175 (19%), Positives = 69/175 (39%), Gaps = 35/175 (20%) Query: 52 HDEKIKALEVIIEK---------------ANAAPIIVAYHFNSDLARLQK---------- 86 H K+ AL+ I+++ +++ + L ++K Sbjct: 1820 HSPKLVALQEILQECGIGSEISSPDASAAVGQHRVLIFAQHKAFLDIIEKDLFQSHMRSV 1879 Query: 87 ---AFPQGRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLE 142 DK ++ +N + I +L G GLNL + LVF W+ Sbjct: 1880 TYLRLDGSVQTDKRFEIVKTFNSDPTIDVLLLTTHVGGLGLNLT-SADTLVFMEHDWNPM 1938 Query: 143 EHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + Q ++R + G ++ V V+ LI + T++E V+ R K ++ + ++N+ Sbjct: 1939 KDLQAMDR-----AHRLGQRKVVNVHRLIMRGTLEEKVMSLQRFKVSVANAVINS 1988 >gi|302892777|ref|XP_003045270.1| transcription-coupled repair protein CSB/RAD26 [Nectria haematococca mpVI 77-13-4] gi|256726195|gb|EEU39557.1| transcription-coupled repair protein CSB/RAD26 [Nectria haematococca mpVI 77-13-4] Length = 1164 Score = 99.6 bits (247), Expect = 2e-19, Method: Composition-based stats. Identities = 32/163 (19%), Positives = 63/163 (38%), Gaps = 20/163 (12%) Query: 53 DEKIKALEVIIEKA---NAAPIIVAYHFNSDLARLQK----------AFPQGRTLDKDPC 99 K++ + +++K N ++ L ++K +D+ Sbjct: 731 SAKLQLTKDLLQKVMIPNGHKTLLFSQGKQMLNIIEKCIRECDISYVRMDGETPVDQRQP 790 Query: 100 TIQEWNE-GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQ 158 I ++NE I + + G G NL G + ++ F W+ Q ER + Sbjct: 791 MIDKFNEDPNIHVFLMTTRTGGLGTNLT-GADRIIIFDPDWNPSTDLQARERAW-----R 844 Query: 159 AGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 G K+ V +Y L+ + TI+E + R K + + +L K+ Sbjct: 845 LGQKKPVKIYRLMTEGTIEEKIYHRQIFKQFMTNKVLKDPKQR 887 >gi|242059437|ref|XP_002458864.1| hypothetical protein SORBIDRAFT_03g041720 [Sorghum bicolor] gi|241930839|gb|EES03984.1| hypothetical protein SORBIDRAFT_03g041720 [Sorghum bicolor] Length = 1207 Score = 99.6 bits (247), Expect = 2e-19, Method: Composition-based stats. Identities = 46/230 (20%), Positives = 92/230 (40%), Gaps = 43/230 (18%) Query: 8 QRELYCDLQGENIEAFNSASKTVK-------CLQL---ANGAVYYDEEKHWKEVHDEKIK 57 QRELY ++ +N N A K+ K +QL N + ++ D+ + Sbjct: 782 QRELYINILEKNYSKLNGAIKSGKKLALNNILMQLRKCCNHPYLFQGLNTEQQPEDDFLS 841 Query: 58 AL-------------EVIIEKANAAPIIVAYHFNSDLARLQKA-----FPQGRT-----L 94 + + E+ N +++ L L+ F R L Sbjct: 842 LVAVSGKLQLLQKLLPRLKERGNR--VLIFSQMTMMLDILEGFLFYMGFKYARIDGQTSL 899 Query: 95 DKDPCTIQEWN--EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIG 152 +I+E+N E +I + + G G++L G + ++ + ++ Q R Sbjct: 900 SARQESIKEYNRAESEIFIFLMSTRAGGLGVDL-PGADRVIIYDPDFNPFMDLQAQAR-- 956 Query: 153 VTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKET 202 + G R V VY LI + +++E +LQ+ + K ++++L+N+ K+ Sbjct: 957 ---AHRIGQTRPVVVYQLITKCSVEEKILQKSKKKLAVENMLMNSSNKKP 1003 >gi|320584169|gb|EFW98380.1| helicase, putative [Pichia angusta DL-1] Length = 1498 Score = 99.6 bits (247), Expect = 2e-19, Method: Composition-based stats. Identities = 30/166 (18%), Positives = 68/166 (40%), Gaps = 19/166 (11%) Query: 44 EEKHWKEVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQKAF---------PQGR 92 +K + K++ L +++ +++ L L+K G Sbjct: 1200 PDKSLLQYDCGKLQKLASLLQDLIPKGHRVLIFTQMTKVLDILEKFMNYNGYKYMRLDGA 1259 Query: 93 TLDKDPCTI-QEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 T +D + + +N + KI S G G+NL G + ++F+ W+ +Q +R Sbjct: 1260 TKIEDRQLLTERFNKDPKIKCFILSTRSGGLGINLT-GADTVIFYDSDWNPAMDKQCQDR 1318 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + G R V +Y +++ TI+ +L++ K + ++++ Sbjct: 1319 C-----HRIGQTRDVHIYRFVSEYTIESNILKKANQKRQLDNVVIQ 1359 >gi|50308261|ref|XP_454131.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140] gi|49643266|emb|CAG99218.1| KLLA0E04159p [Kluyveromyces lactis] Length = 826 Score = 99.6 bits (247), Expect = 2e-19, Method: Composition-based stats. Identities = 30/167 (17%), Positives = 67/167 (40%), Gaps = 20/167 (11%) Query: 52 HDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQK----------AFPQGRTLDKDPC 99 K++ L+ ++ + +++ F S L ++ + Sbjct: 570 TSGKLQVLQKLVPELIKKKHKVLIFSQFVSMLDLIEDWSELNNFISCRIDGSMQNNSRKE 629 Query: 100 TIQEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 I+E+++ K L + G G+NL ++++ F W+ + Q ++R Sbjct: 630 QIEEFSKKGSKANLFLLSTRAAGLGINLTAADSVII-FDSDWNPQVDLQAMDR-----AH 683 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIH 204 + G + V VY L NTI+ +++ R K ++ L++ K T+ Sbjct: 684 RIGQTKPVIVYRLYCDNTIENVIMTRAVNKRKLEKLVIQMGKFNTLK 730 >gi|242013509|ref|XP_002427447.1| Helicase, putative [Pediculus humanus corporis] gi|212511833|gb|EEB14709.1| Helicase, putative [Pediculus humanus corporis] Length = 2228 Score = 99.6 bits (247), Expect = 2e-19, Method: Composition-based stats. Identities = 33/176 (18%), Positives = 69/176 (39%), Gaps = 19/176 (10%) Query: 35 LANGAVYYDEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQK------ 86 +A+ + + K++ L+ ++ K N +++ L L+ Sbjct: 1523 IASSMCTQFPDPRLIQYDCGKLQVLDKLLRKLKMNHHKVLLFTQMTRMLDILEAFLNYHG 1582 Query: 87 ----AFPQGRTLDKDPCTIQEWNEGK-IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDL 141 +D+ ++ +N K I S G G+NL G + ++F+ W+ Sbjct: 1583 HIYLRLDGTTKVDQRQVLMERFNGDKRIFCFILSTRSGGIGVNLT-GADTVIFYDSDWNP 1641 Query: 142 EEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 Q +R + G R V +Y LI++ T++E +L++ K + DL + Sbjct: 1642 TMDAQAQDRC-----HRIGQTRDVHIYRLISEMTVEENILKKANQKRLLGDLAIEG 1692 >gi|195124267|ref|XP_002006615.1| GI18485 [Drosophila mojavensis] gi|193911683|gb|EDW10550.1| GI18485 [Drosophila mojavensis] Length = 1020 Score = 99.6 bits (247), Expect = 2e-19, Method: Composition-based stats. Identities = 42/225 (18%), Positives = 89/225 (39%), Gaps = 37/225 (16%) Query: 6 KFQRELYCDLQGENIEAFNSASKTVK------CLQL---ANGAVYYD--------EEKHW 48 K QR+ Y + ++I+ N A K K +QL N +D Sbjct: 365 KMQRDWYTKVLLKDIDIVNGAGKVEKMRLQNILMQLRKCTNHPYLFDGAEPGPPYTTDTH 424 Query: 49 KEVHDEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQ---------KAFPQGRTLDKD 97 + K+ L+ ++ K + +++ L L+ G+T +D Sbjct: 425 LVYNSGKMAILDKLLPKLQEQGSRVLIFSQMTRMLDILEDYCHWRNYNYCRLDGQTPHED 484 Query: 98 P-CTIQEWN--EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 IQE+N + + G G+NL ++++ + W+ + Q ++R Sbjct: 485 RNRQIQEYNMENSTKFIFMLSTRAGGLGINL-ATADVVIIYDSDWNPQMDLQAMDR---- 539 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 + G K+ V V+ LI ++T++E +++R K + +++ + Sbjct: 540 -AHRIGQKKQVRVFRLITESTVEEKIVERAEVKLRLDKMVIQGGR 583 >gi|221062029|ref|XP_002262584.1| DNA repair protein rhp16 [Plasmodium knowlesi strain H] gi|193811734|emb|CAQ42462.1| DNA repair protein rhp16, putative [Plasmodium knowlesi strain H] Length = 1527 Score = 99.6 bits (247), Expect = 2e-19, Method: Composition-based stats. Identities = 34/169 (20%), Positives = 65/169 (38%), Gaps = 24/169 (14%) Query: 52 HDEKIKALEVIIEK---ANAAPIIVAYHFNSDLARLQKAFPQGRTL----------DKDP 98 KI+A+ ++ ++ + S L ++ + + Sbjct: 1355 SSTKIEAVFEEVKNVIHTTDDKCLIFSQYCSMLDLIEYHLKKHNIICSKLLGYMPMVSRN 1414 Query: 99 CTIQEWNEGK-IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 + +NE K + +L + G GLNLQ N + WW+ Q I+R Sbjct: 1415 NILYNFNEDKHLRVLLISLKAGGEGLNLQV-ANRIFIVDPWWNPAAELQAIQR-----AH 1468 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL----NALKKET 202 + G + V+ I +NT++E ++Q K + D + NA++K T Sbjct: 1469 RIGQTKTVYATRFIIENTVEEKIVQLQNKKQLVFDCTIGDSGNAMQKLT 1517 >gi|115385374|ref|XP_001209234.1| helicase swr1 [Aspergillus terreus NIH2624] gi|114196926|gb|EAU38626.1| helicase swr1 [Aspergillus terreus NIH2624] Length = 1532 Score = 99.6 bits (247), Expect = 2e-19, Method: Composition-based stats. Identities = 30/166 (18%), Positives = 67/166 (40%), Gaps = 19/166 (11%) Query: 44 EEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAF---------PQGR 92 +K + K++ L+ ++ A ++ L L++ G Sbjct: 1205 PDKRLLQYDCGKLQRLDKLLRDLKAGGHRALIFTQMTKMLDILEQFLNIHGHRYLRLDGT 1264 Query: 93 TLDKDPCTI--QEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 T + + + N+ +I S G G+NL G + ++F+ L W+ +Q +R Sbjct: 1265 TKVEQRQILTDRFNNDDRILAFILSSRSGGLGINLT-GADTVIFYDLDWNPAMDKQCQDR 1323 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + G R V +Y +++ TI+ +L++ K + D+++ Sbjct: 1324 C-----HRIGQTRDVHIYRFVSEYTIESNILRKANQKRMLDDVVIQ 1364 >gi|328711442|ref|XP_001943462.2| PREDICTED: DNA repair and recombination protein RAD54B-like [Acyrthosiphon pisum] Length = 842 Score = 99.6 bits (247), Expect = 2e-19, Method: Composition-based stats. Identities = 34/166 (20%), Positives = 71/166 (42%), Gaps = 21/166 (12%) Query: 46 KHWKEVHDEKIKALEVIIEKANA----APIIVAYHFNS--------DLARLQKAFPQGRT 93 KH K+ ++ ++++ + ++++Y+ + D+ + G T Sbjct: 582 KHSLIESSGKLIVVDNLLKELHKNGSEKTVLISYYTQTLDIFVKLCDMKHYKYLRLDGST 641 Query: 94 LDKDPCTI-QEWNEGK--IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 I +++N +L + G GLNL G + L+ + W+ QQ + R Sbjct: 642 ATAQRTDIVKKFNNSNSNYSVLLLSAKAGGVGLNL-VGASNLILYDSDWNPASDQQAMAR 700 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 I + G K+ V +Y L+ TI+E + QR +K+ + + + N Sbjct: 701 IW-----RDGQKKNVHIYRLLTSGTIEEKIFQRQISKTGLSEAITN 741 >gi|315043989|ref|XP_003171370.1| serine/threonine protein kinase [Arthroderma gypseum CBS 118893] gi|311343713|gb|EFR02916.1| serine/threonine protein kinase [Arthroderma gypseum CBS 118893] Length = 1707 Score = 99.6 bits (247), Expect = 2e-19, Method: Composition-based stats. Identities = 30/166 (18%), Positives = 68/166 (40%), Gaps = 19/166 (11%) Query: 44 EEKHWKEVHDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAF---------PQGR 92 +K + K++ L+ ++ +A ++ L L++ G Sbjct: 1357 PDKRLLQYDCGKLQQLDKLLRTLQAGGHRALIFTQMTKMLDILEQFLNIHGHRYLRLDGS 1416 Query: 93 TLDKDPCTI--QEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 T + + + N+ +I S G G+NL G + ++F+ L W+ +Q +R Sbjct: 1417 TKIEQRQLLTERFNNDTRILAFILSSRSGGLGINLT-GADTVIFYDLDWNPAMDKQCQDR 1475 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + G R V +Y +++ TI+ +L++ K + D+++ Sbjct: 1476 C-----HRIGQTRDVHIYRFVSEYTIESNILRKANQKRMLDDVVIQ 1516 >gi|254569384|ref|XP_002491802.1| Member of the imitation-switch (ISWI) class of ATP-dependent chromatin remodeling complexes [Pichia pastoris GS115] gi|238031599|emb|CAY69522.1| Member of the imitation-switch (ISWI) class of ATP-dependent chromatin remodeling complexes [Pichia pastoris GS115] Length = 1061 Score = 99.6 bits (247), Expect = 2e-19, Method: Composition-based stats. Identities = 41/224 (18%), Positives = 87/224 (38%), Gaps = 39/224 (17%) Query: 6 KFQRELYCDLQGENIEAFNSAS--------KTVKCLQL--ANGAVYYDEEKHW------- 48 QR+ Y + ++I+A S+S +QL Y E Sbjct: 399 DMQRQWYQKILEKDIDAVVSSSGKKESKTRLLNIVMQLRKCCNHPYLFEGAEPGPPFTTD 458 Query: 49 --KEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQ---------KAFPQGRTLD 95 + +K+K L+ ++++ + +++ + L L+ G+T Sbjct: 459 EHLVFNAQKMKVLDKLLKRKKEQGSRVLIFSQMSRMLDILEDYCNFREYGYCRIDGQTDH 518 Query: 96 KDPCT-IQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIG 152 D I ++N + + G G+NL + ++ + W+ + Q ++R Sbjct: 519 SDRIDAIDDYNRKDSDKFVFLLTTRAGGLGINLT-SADTVILYDSDWNPQADLQAMDR-- 575 Query: 153 VTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + G + V+VY L+ +N I+E VL+R + K + L++ Sbjct: 576 ---AHRIGQTKQVYVYRLVTENAIEEKVLERAQQKLRLDQLVIQ 616 >gi|303276396|ref|XP_003057492.1| ran-binding dexh-box helicase [Micromonas pusilla CCMP1545] gi|226461844|gb|EEH59137.1| ran-binding dexh-box helicase [Micromonas pusilla CCMP1545] Length = 1514 Score = 99.6 bits (247), Expect = 2e-19, Method: Composition-based stats. Identities = 35/177 (19%), Positives = 64/177 (36%), Gaps = 21/177 (11%) Query: 36 ANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQ---------- 85 A Y + E+ K++ +K+ L K +++ L L+ Sbjct: 954 AAHEKYGEVERSGKQLVTQKVLELW----KEQGHRVLLFSQTQQMLDILEAMVAKAGYPY 1009 Query: 86 KAFPQGRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEH 144 + + + I E+N + + + G G+NL G + ++ + W+ Sbjct: 1010 RRMDGATPVSQRMTLIDEFNTDANVFVFLLTTKVGGLGVNLT-GADRVLLYDPDWNPSTD 1068 Query: 145 QQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 Q ER + G R V VY L+ TI+E V R K + +L K+ Sbjct: 1069 AQARERAW-----RIGQTREVTVYRLVTAGTIEEKVYHRQIYKEFLTSKVLKDPKQR 1120 >gi|47210118|emb|CAF91684.1| unnamed protein product [Tetraodon nigroviridis] Length = 1996 Score = 99.6 bits (247), Expect = 2e-19, Method: Composition-based stats. Identities = 28/142 (19%), Positives = 56/142 (39%), Gaps = 20/142 (14%) Query: 69 APIIVAYHFNSDLARLQKAFPQGRTLD--------------KDPCTIQEWNEGKIPLLFA 114 +++ S L ++ + + + + N+ I +L Sbjct: 1765 HRVLIFCQLKSMLDIVEHDLLKPKLPSVTYLRLDGSVPAGLRHSIVSRFNNDPSIDVLLL 1824 Query: 115 HPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQN 174 G GLNL G + +VF W+ Q ++R + G KR V VY LI + Sbjct: 1825 TTHVGGLGLNLT-GADTVVFVEHDWNPMRDLQAMDR-----AHRIGQKRVVNVYRLITRG 1878 Query: 175 TIDELVLQRLRTKSTIQDLLLN 196 T++E ++ + K +I + +++ Sbjct: 1879 TLEEKIMGLQKFKMSIANTVIS 1900 >gi|170940256|emb|CAP65483.1| unnamed protein product [Podospora anserina S mat+] Length = 866 Score = 99.6 bits (247), Expect = 2e-19, Method: Composition-based stats. Identities = 33/207 (15%), Positives = 75/207 (36%), Gaps = 22/207 (10%) Query: 5 HKFQRELYCDLQGENIEAFNSASKTVKCLQLANGA--VYYDEEKHWKEVHDEKIKALEVI 62 +F+R +L I + ++ + N Y E K+ L+ + Sbjct: 578 DEFERARTLELAKREISLKKLGNPVMQLRLVCNSPHHFYDCEADESIVTASGKMLLLDRL 637 Query: 63 IEK--ANAAPIIVAYHFNSDLARLQK-----------AFPQGRTLDKDPCTIQEWN-EGK 108 + +++ FN L L+ + I+++N + + Sbjct: 638 LPALFERGHKVLIFSQFNKQLDLLESYCADLRGWPVCRIDGSVAQEDRQAQIEDFNKDPE 697 Query: 109 IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVY 168 + + + G G+NL + ++ F W+ ++ Q R + G R V VY Sbjct: 698 LKIFLLTTRAGGQGINL-ASADTVILFDSDWNPQQDLQA-----QDRAHRIGQTRPVVVY 751 Query: 169 YLIAQNTIDELVLQRLRTKSTIQDLLL 195 L ++T+++ +L K ++ L++ Sbjct: 752 RLATKDTVEDELLGSADAKRRLEKLVI 778 >gi|326523023|dbj|BAJ88557.1| predicted protein [Hordeum vulgare subsp. vulgare] Length = 1220 Score = 99.6 bits (247), Expect = 2e-19, Method: Composition-based stats. Identities = 37/156 (23%), Positives = 59/156 (37%), Gaps = 19/156 (12%) Query: 53 DEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQ----------KAFPQGRTLDKDPCT 100 K+K +E I++ K +++ L L+ + + Sbjct: 747 SGKMKVVEQILKVWKDQGHRVLLFAQTQQMLDILESFLTARDYQYRRMDGLTPPKQRMAL 806 Query: 101 IQEWNE-GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQA 159 I E+N +I + G G NL G N ++ F W+ Q ER + Sbjct: 807 IDEFNNTDEIFIFILTTKVGGLGTNLT-GANRVIIFDPDWNPSTDMQARERAW-----RI 860 Query: 160 GFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 G KR V VY LI + TI+E V R K + + +L Sbjct: 861 GQKRDVTVYRLITRGTIEEKVYHRQIYKHFLTNKVL 896 >gi|155121958|gb|ABT13826.1| hypothetical protein MT325_M272L [Paramecium bursaria chlorella virus MT325] Length = 459 Score = 99.6 bits (247), Expect = 2e-19, Method: Composition-based stats. Identities = 38/209 (18%), Positives = 73/209 (34%), Gaps = 29/209 (13%) Query: 1 MKQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYY---DEEKHWKEVHDEKIK 57 +K Y + G++ ++ Q D + + E K+K Sbjct: 237 LKAYKAY---------GDSEGRMEILKTLLRLRQCTANITMVPKNDSKDEFYEGTSTKLK 287 Query: 58 ALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTL----------DKDPCTIQEWNEG 107 LE I+ + ++ HF+ ++ ++ D+ I+++NE Sbjct: 288 MLEDDIKASPIQKTLIFAHFHKEMTAIKDMLLSNGHKSVSINGNVSGDERVKAIKQFNED 347 Query: 108 K-IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVF 166 A+ G GLNLQ I + + W+ Q I R + G + V Sbjct: 348 SATNFFIIQIAAGGVGLNLQTASRIYI-NGVDWNGTSETQAIAR-----AHRIGQTKPVI 401 Query: 167 VYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 V LI ++ID+ ++ + K +L Sbjct: 402 VKRLIINDSIDDAIIGLQQKKFGAAADIL 430 >gi|156030975|ref|XP_001584813.1| hypothetical protein SS1G_14268 [Sclerotinia sclerotiorum 1980] gi|154700659|gb|EDO00398.1| hypothetical protein SS1G_14268 [Sclerotinia sclerotiorum 1980 UF-70] Length = 1595 Score = 99.6 bits (247), Expect = 2e-19, Method: Composition-based stats. Identities = 29/166 (17%), Positives = 68/166 (40%), Gaps = 19/166 (11%) Query: 44 EEKHWKEVHDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQK----------AFPQG 91 +K + K++ L+ ++ +A ++ L L++ Sbjct: 1264 PDKRLLQYDCGKLQTLDKLLRKLQAGGHRALIFTQMTKVLDILEQFLNIHGHKYLRLDGA 1323 Query: 92 RTLDKDPCTIQEWNEG-KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 +++ +N +I S G G+NL G + ++F+ L W+ +Q +R Sbjct: 1324 TKIEQRQILTDRFNNDTRILAFILSSRSGGLGINLT-GADTVIFYDLDWNPAMDKQCQDR 1382 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + G R V +Y L++++TI+ +L++ K + D+++ Sbjct: 1383 C-----HRIGQTRDVHIYRLVSEHTIEANILRKANQKRMLDDVVIQ 1423 >gi|327296738|ref|XP_003233063.1| serine/threonine protein kinase [Trichophyton rubrum CBS 118892] gi|326464369|gb|EGD89822.1| serine/threonine protein kinase [Trichophyton rubrum CBS 118892] Length = 1693 Score = 99.6 bits (247), Expect = 2e-19, Method: Composition-based stats. Identities = 30/166 (18%), Positives = 68/166 (40%), Gaps = 19/166 (11%) Query: 44 EEKHWKEVHDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAF---------PQGR 92 +K + K++ L+ ++ +A ++ L L++ G Sbjct: 1343 PDKRLLQYDCGKLQQLDKLLRKLQAGGHRALIFTQMTKMLDILEQFLNIHGHRYLRLDGS 1402 Query: 93 TLDKDPCTI--QEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 T + + + N+ +I S G G+NL G + ++F+ L W+ +Q +R Sbjct: 1403 TKIEQRQLLTERFNNDTRILAFILSSRSGGLGINLT-GADTVIFYDLDWNPAMDKQCQDR 1461 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + G R V +Y +++ TI+ +L++ K + D+++ Sbjct: 1462 C-----HRIGQTRDVHIYRFVSEYTIESNILRKANQKRMLDDVVIQ 1502 >gi|219110099|ref|XP_002176801.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1] gi|217411336|gb|EEC51264.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1] Length = 711 Score = 99.6 bits (247), Expect = 2e-19, Method: Composition-based stats. Identities = 34/164 (20%), Positives = 67/164 (40%), Gaps = 19/164 (11%) Query: 53 DEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQ-----KAFPQGRT-----LDKDPCT 100 K++ L I+ K +++ + L ++ K + GR + Sbjct: 325 SGKLEVLSKILPLWKKQGHRVLIFCQWRKMLDIIERLIMLKEWKFGRLDGNTNVASRQRL 384 Query: 101 IQEWNEGKIPL-LFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQA 159 + ++N + + + G GLNL G N ++ + W+ + Q ER + Sbjct: 385 VDQFNSDESYFGMLCTTRTGGVGLNLT-GANRIILYDPDWNPQTDAQARERAW-----RF 438 Query: 160 GFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETI 203 G +R V VY LI TI+E + QR K+ + + +L ++ + Sbjct: 439 GQEREVTVYRLITAGTIEEKIYQRQIFKTALSNKVLQDPRQRRL 482 >gi|147818386|emb|CAN71217.1| hypothetical protein VITISV_033485 [Vitis vinifera] Length = 1249 Score = 99.6 bits (247), Expect = 2e-19, Method: Composition-based stats. Identities = 43/177 (24%), Positives = 70/177 (39%), Gaps = 22/177 (12%) Query: 42 YDEEKHWKEVH--DEKIKALEVIIEKANAAPIIVAYHFNSDLARLQ----------KAFP 89 D EK+WKE E + LE I + IV + S L L+ + Sbjct: 1071 IDVEKNWKESSKISELLHCLERISQSRIGEKSIVFSQWTSFLDLLEIPLRRRGIGFLRYD 1130 Query: 90 QGRTLDKDPCTIQEWNE-GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMI 148 + ++E++E + +L + G GLNL N + WW+ +Q I Sbjct: 1131 GKVVQKQRERILKEFSETEEKMVLLMSLKAGGVGLNLTAASN-VFLMDPWWNPAVEEQAI 1189 Query: 149 ERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIHV 205 RI + G +R V V I ++T++E + Q K Q ++ AL E + Sbjct: 1190 MRI-----HRIGQERTVRVRRFIVKDTVEERMQQVQARK---QRMITGALTDEEVRT 1238 >gi|253721987|gb|ACT34057.1| Mot1 [Aegilops tauschii] Length = 2051 Score = 99.6 bits (247), Expect = 2e-19, Method: Composition-based stats. Identities = 34/175 (19%), Positives = 69/175 (39%), Gaps = 35/175 (20%) Query: 52 HDEKIKALEVIIEK---------------ANAAPIIVAYHFNSDLARLQK---------- 86 H K+ AL+ I+++ +++ + L ++K Sbjct: 1802 HSPKLVALQEILQECGIGSEISSPDASAAVGQHRVLIFAQHKAFLDIIEKDLFQSHMRSV 1861 Query: 87 ---AFPQGRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLE 142 DK ++ +N + I +L G GLNL + LVF W+ Sbjct: 1862 TYLRLDGSVQTDKRFEIVKTFNSDPTIDVLLLTTHVGGLGLNLT-SADTLVFMEHDWNPM 1920 Query: 143 EHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + Q ++R + G ++ V V+ LI + T++E V+ R K ++ + ++N+ Sbjct: 1921 KDLQAMDR-----AHRLGQRKVVNVHRLIMRGTLEEKVMSLQRFKVSVANAVINS 1970 >gi|296489466|gb|DAA31579.1| transcription termination factor, RNA polymerase II [Bos taurus] Length = 1163 Score = 99.6 bits (247), Expect = 2e-19, Method: Composition-based stats. Identities = 31/166 (18%), Positives = 69/166 (41%), Gaps = 18/166 (10%) Query: 43 DEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLA----RLQKAFPQGRTLDKDP 98 D+++ ++ + LE + + + ++ + S L L++ T+D Sbjct: 986 DDKRESTKISS-LLAELEAVRRNSGSQKSVIVSQWTSMLKVVALHLKRCGFTYATIDGSV 1044 Query: 99 CT------IQEWNEGKIP-LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERI 151 ++ +N + P ++ + G GLNL GGN L + W+ Q +RI Sbjct: 1045 NPKQRMDLVEAFNSPRGPQVMLISLLAGGVGLNLT-GGNHLFLLDMHWNPSLEDQACDRI 1103 Query: 152 GVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + G ++ V ++ + + T++E +LQ K + +L+ Sbjct: 1104 -----YRVGQQKDVVIHKFVCEETVEEKILQLQEKKKDLAKQILSG 1144 >gi|134077223|emb|CAK45564.1| unnamed protein product [Aspergillus niger] Length = 841 Score = 99.6 bits (247), Expect = 2e-19, Method: Composition-based stats. Identities = 29/172 (16%), Positives = 64/172 (37%), Gaps = 20/172 (11%) Query: 46 KHWKEVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQK-----------AFPQGR 92 K+ L+ ++ I++ F + L LQ Sbjct: 591 DETLVTASGKMLLLDRLVPCLLNKGHKILIFSQFKTQLDILQDWATQLRSWNCCRIDGAV 650 Query: 93 TLDKDPCTIQEWNEGKI-PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERI 151 + + I+ +N K L + G G+NL + ++ F W+ ++ Q Sbjct: 651 SQEDRRAQIKAFNTDKNYKLFLLSTRAGGQGINL-MAADTVILFDSDWNPQQDLQA---- 705 Query: 152 GVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETI 203 R + G + V VY L + T+++ +L++ +K ++ L++ K ++ Sbjct: 706 -QDRAHRIGQTKPVIVYRLATKGTVEQTLLEKADSKRRLERLVIQKGKFRSL 756 >gi|123959764|ref|NP_001074204.1| transcription termination factor 2 [Bos taurus] gi|115545427|gb|AAI22691.1| Transcription termination factor, RNA polymerase II [Bos taurus] Length = 1163 Score = 99.6 bits (247), Expect = 2e-19, Method: Composition-based stats. Identities = 31/166 (18%), Positives = 69/166 (41%), Gaps = 18/166 (10%) Query: 43 DEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLA----RLQKAFPQGRTLDKDP 98 D+++ ++ + LE + + + ++ + S L L++ T+D Sbjct: 986 DDKRESTKISS-LLAELEAVRRNSGSQKSVIVSQWTSMLKVVALHLKRCGFTYATIDGSV 1044 Query: 99 CT------IQEWNEGKIP-LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERI 151 ++ +N + P ++ + G GLNL GGN L + W+ Q +RI Sbjct: 1045 NPKQRMDLVEAFNSPRGPQVMLISLLAGGVGLNLT-GGNHLFLLDMHWNPSLEDQACDRI 1103 Query: 152 GVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + G ++ V ++ + + T++E +LQ K + +L+ Sbjct: 1104 -----YRVGQQKDVVIHKFVCEETVEEKILQLQEKKKDLAKQILSG 1144 >gi|255086381|ref|XP_002509157.1| SNF2 super family [Micromonas sp. RCC299] gi|226524435|gb|ACO70415.1| SNF2 super family [Micromonas sp. RCC299] Length = 1814 Score = 99.6 bits (247), Expect = 2e-19, Method: Composition-based stats. Identities = 41/243 (16%), Positives = 84/243 (34%), Gaps = 55/243 (22%) Query: 3 QYHKFQ-----RELYCDLQGENIEAFNSAS----KTVKCLQLANGAVYYDEEKHWK---- 49 Y F+ E+ + G A +A+ +L + E K Sbjct: 1495 LYDAFEGSSANAEITNVISGGGESASGAATHVFQALQYLRKLCSHPRLVTEGDGKKGKKA 1554 Query: 50 ----EVHDEKIKALEVII------------------EKANAAPIIVAYHFNSDLARLQKA 87 E K AL+ I+ ++++ +++ S L ++ Sbjct: 1555 KPTAETMSPKFMALKQILLDCGIGEDPLAEKDPDQKQESSGHRVLIFSQLKSLLDLVEDE 1614 Query: 88 F------------PQGRTLDKDPCTI-QEWN-EGKIPLLFAHPASCGHGLNLQYGGNILV 133 G + +++N + I +L G GLNL + +V Sbjct: 1615 LFGHLLKGVSWLRLDGSVAPTARFDVVRKFNADPSIDVLLLTTHVGGLGLNLT-SADTVV 1673 Query: 134 FFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDL 193 F W+ ++ Q ++R + G KR V V+ L+ + T++E ++ R K + + Sbjct: 1674 FLEHDWNPQKDLQAMDR-----AHRLGQKRTVNVFRLLTKGTLEEKIMGLQRFKLDVANA 1728 Query: 194 LLN 196 ++N Sbjct: 1729 VVN 1731 >gi|320586275|gb|EFW98954.1| rsc complex subunit [Grosmannia clavigera kw1407] Length = 1493 Score = 99.6 bits (247), Expect = 2e-19, Method: Composition-based stats. Identities = 40/225 (17%), Positives = 86/225 (38%), Gaps = 33/225 (14%) Query: 2 KQYHKF---QRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHD----- 53 + Y + + + D +G + A ++ ++ +L N +DE + Sbjct: 840 RLYKEMLTNNKLIVSDGKGGKMGARGLSNVIMQLRKLCNHPFVFDEIETVMNPLSISNDL 899 Query: 54 -----EKIKALEVIIE--KANAAPIIVAYHFNSDLARL---------QKAFPQGRTL-DK 96 K + LE ++ +A +++ + + + + Q G T D+ Sbjct: 900 LWRTAGKFELLERVLPKYQATGHRVLMFFQMTAIMDIMEDFLRYRNVQYLRLDGTTKADE 959 Query: 97 DPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 ++E+N P + + G GLNLQ + ++ + W+ + Q Sbjct: 960 RSDLLREFNAPNSPYFMFLLSTRAGGLGLNLQT-ADTVIIYDSDWNPHQDLQA-----QD 1013 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 R + G K V + LI +I+E +L+R R K + ++ A + Sbjct: 1014 RAHRIGQKNEVRILRLITSTSIEEKILERARYKLDMDGKVIQAGR 1058 >gi|297814462|ref|XP_002875114.1| CHR19/ETL1 [Arabidopsis lyrata subsp. lyrata] gi|297320952|gb|EFH51373.1| CHR19/ETL1 [Arabidopsis lyrata subsp. lyrata] Length = 764 Score = 99.6 bits (247), Expect = 2e-19, Method: Composition-based stats. Identities = 29/162 (17%), Positives = 64/162 (39%), Gaps = 19/162 (11%) Query: 49 KEVHDEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQ---------KAFPQGRTLDKD 97 + K + L ++ +++ + S L L+ G T D Sbjct: 584 HVMLSAKCRTLAELLPSMKKSGHRVLIFSQWTSMLDILEWTLDVIGVTYRRLDGSTQVTD 643 Query: 98 PCTIQE-WNEGK-IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTR 155 TI + +N K I + G GLNL G + ++ + ++ + +Q +R Sbjct: 644 RQTIVDTFNNDKSIFACLLSTRAGGQGLNLT-GADTVIIHDMDFNPQIDRQAEDRC---- 698 Query: 156 QRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + G + V ++ L+ ++T+DE + + + K + +L + Sbjct: 699 -HRIGQTKPVTIFRLVTKSTVDENIYEIAKRKLVLDAAVLES 739 >gi|259485512|tpe|CBF82596.1| TPA: Helicase swr1 (EC 3.6.1.-) [Source:UniProtKB/Swiss-Prot;Acc:Q5ARK3] [Aspergillus nidulans FGSC A4] Length = 1698 Score = 99.6 bits (247), Expect = 2e-19, Method: Composition-based stats. Identities = 30/166 (18%), Positives = 67/166 (40%), Gaps = 19/166 (11%) Query: 44 EEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAF---------PQGR 92 +K + K++ L+ ++ A ++ L L++ G Sbjct: 1363 PDKRLLQYDCGKLQRLDKLLRDLKAGGHRALIFTQMTKMLDVLEQFLNIHGHRYLRLDGT 1422 Query: 93 TLDKDPCTI--QEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 T + + + N+ +I S G G+NL G + ++F+ L W+ +Q +R Sbjct: 1423 TKVEQRQILTDRFNNDNRILAFILSSRSGGLGINLT-GADTVIFYDLDWNPAMDKQCQDR 1481 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + G R V +Y +++ TI+ +L++ K + D+++ Sbjct: 1482 C-----HRIGQTRDVHIYRFVSEYTIESNILRKANQKRMLDDVVIQ 1522 >gi|297738311|emb|CBI27512.3| unnamed protein product [Vitis vinifera] Length = 728 Score = 99.6 bits (247), Expect = 2e-19, Method: Composition-based stats. Identities = 31/162 (19%), Positives = 63/162 (38%), Gaps = 19/162 (11%) Query: 49 KEVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQ---------KAFPQGRTLDKD 97 + K + L ++ +++ + S L L+ G T D Sbjct: 548 HVMVSAKCRELAELLPTLKQGGHRVLIFSQWTSMLDILEWTLDVIGVTYRRLDGSTQVTD 607 Query: 98 PCTIQE--WNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTR 155 TI + N+ I + G GLNL G + +V + ++ + +Q +R Sbjct: 608 RQTIVDTFNNDTSIFACLLSTRAGGQGLNLT-GADTVVIHDMDFNPQIDRQAEDRC---- 662 Query: 156 QRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + G + V +Y L+ ++T+DE V + + K + +L + Sbjct: 663 -HRIGQTKPVTIYRLVTKDTVDENVYEIAKRKLILDAAVLES 703 >gi|156098278|ref|XP_001615171.1| helicase [Plasmodium vivax SaI-1] gi|148804045|gb|EDL45444.1| helicase, putative [Plasmodium vivax] Length = 1399 Score = 99.6 bits (247), Expect = 2e-19, Method: Composition-based stats. Identities = 44/224 (19%), Positives = 91/224 (40%), Gaps = 37/224 (16%) Query: 6 KFQRELYCDLQGENIEAFNSAS-----KTVKCLQL---ANGAVYYD--------EEKHWK 49 K Q++LY D+ +NI+ N+ + +QL N +D E H Sbjct: 558 KLQKKLYSDILSKNIDVINAMTGSKNQMLNILMQLRKCCNHPYLFDGIEEPPYIEGNHLI 617 Query: 50 EVHDEKIKALEVIIEKANA--APIIVAYHFNSDLARL---------QKAFPQGRTLDKDP 98 E K+ L+ ++ + + +++ L + + G T+ + Sbjct: 618 E-TSGKMSLLDKLLPRLKKENSRVLLFSQMTRVLDIIDDYCRWKNYEYLRIDGSTVGDER 676 Query: 99 CT-IQEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTR 155 I ++NE K + + G G+NL +I++ F ++ + Q ++R Sbjct: 677 QIRINQFNEPNSKYFIFLLSTRAGGIGINLTT-ADIVILFDSDYNPQMDIQAMDR----- 730 Query: 156 QRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 + G K+ V VY + QN+++E +++R K + L++ K Sbjct: 731 AHRIGQKKKVIVYRFVTQNSVEEKIVERAAKKLKLDSLIIQKGK 774 >gi|308511103|ref|XP_003117734.1| hypothetical protein CRE_00333 [Caenorhabditis remanei] gi|308238380|gb|EFO82332.1| hypothetical protein CRE_00333 [Caenorhabditis remanei] Length = 3156 Score = 99.6 bits (247), Expect = 2e-19, Method: Composition-based stats. Identities = 42/226 (18%), Positives = 82/226 (36%), Gaps = 37/226 (16%) Query: 3 QYHKFQRELYCDLQGENIEAFNSASKTV-KCLQLANGAVYYDEEKHWKEVH--------- 52 Y Q+ L D G+ S T+ +L N ++ + + Sbjct: 1820 LYKHMQKGLLLD--GKTNTGSRSLMNTMVHLRKLCNHPFLFNNVEDSCKSFWNSKFITAT 1877 Query: 53 -----DEKIKALEVIIE--KANAAPIIVAYHFNSDLA---------RLQKAFPQGRTL-D 95 K++ L+ I+ +A +++ + + + + G T D Sbjct: 1878 DLYRVSGKLELLDRILPKLRATGHRVLMFFQMTAMMTVVEDYLAGGTINYLRLDGSTKPD 1937 Query: 96 KDPCTIQEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGV 153 + + ++N K L + G GLNLQ + ++ F W+ + Q Sbjct: 1938 ERGALLDKFNAPNSKYFLFMLSTRAGGLGLNLQT-ADTVIIFDSDWNPHQDMQA-----Q 1991 Query: 154 TRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 R + G K V V+ LI N+++E +L R K + + ++ A K Sbjct: 1992 DRAHRIGQKAEVRVFRLITSNSVEEKILASARFKLNVDEKVIQAGK 2037 >gi|168012021|ref|XP_001758701.1| SNF2 family DNA-dependent ATPase [Physcomitrella patens subsp. patens] gi|162690311|gb|EDQ76679.1| SNF2 family DNA-dependent ATPase [Physcomitrella patens subsp. patens] Length = 1220 Score = 99.6 bits (247), Expect = 2e-19, Method: Composition-based stats. Identities = 30/166 (18%), Positives = 65/166 (39%), Gaps = 20/166 (12%) Query: 52 HDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQ---------KAFPQGRTLDKDPCT 100 + K+ L+ ++ K A +++ F L L+ G+ + Sbjct: 616 NSGKLLLLDKMMTKLHAQGHRVLIYSQFTRMLDILEDWLHLKKWGYERIDGKISGSERQI 675 Query: 101 -IQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 I +N + G G+NL + ++ + W+ Q + R Sbjct: 676 RIDRYNAPNSTKFCFLLSTRAGGLGINL-ATADTVIIYDSDWNPHADLQAMAR-----AH 729 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETI 203 + G + V ++ L+ + TI+E ++Q + K ++ L++ +KKE I Sbjct: 730 RLGQQNKVMIFRLVTRGTIEERMMQMTKKKMVLEHLVVGRMKKENI 775 >gi|332019859|gb|EGI60320.1| DNA repair and recombination protein RAD54B [Acromyrmex echinatior] Length = 857 Score = 99.6 bits (247), Expect = 3e-19, Method: Composition-based stats. Identities = 43/194 (22%), Positives = 78/194 (40%), Gaps = 24/194 (12%) Query: 15 LQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVA 74 L E ++ SK Q + DE ++ L ++K + ++V+ Sbjct: 578 LNEEEKALYDVLSKVSYLSQ-----IKRDENFTEYCGKVTIVQTLMRNLKKTDEKLVLVS 632 Query: 75 YHFNSDLARLQ-----KAFPQGRTLDKDPCTI-----QEWNE--GKIPLLFAHPASCGHG 122 Y + L L+ + R TI +++N +L + G G Sbjct: 633 Y-YTQTLDLLETICNMERLKFLRLDGATSSTIRLKITEQFNTQTDNSKVLLLSAKAGGVG 691 Query: 123 LNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQ 182 LNL G + LV F W+ Q + RI + G KR V++Y L+ TI+E + Q Sbjct: 692 LNL-PGASRLVLFDSDWNPASDMQAMARIW-----RDGQKRNVYIYRLLTTGTIEEKIYQ 745 Query: 183 RLRTKSTIQDLLLN 196 R +K+ + + +++ Sbjct: 746 RQISKANLSETVVD 759 >gi|296413962|ref|XP_002836675.1| hypothetical protein [Tuber melanosporum Mel28] gi|295630508|emb|CAZ80866.1| unnamed protein product [Tuber melanosporum] Length = 870 Score = 99.6 bits (247), Expect = 3e-19, Method: Composition-based stats. Identities = 36/161 (22%), Positives = 60/161 (37%), Gaps = 22/161 (13%) Query: 52 HDEKIKALEVIIEKA---NAAPIIVAYHFNSDLARLQK----------AFPQGRTLDKDP 98 H K + LE ++ I++ ++ S L LQ +K Sbjct: 552 HSGKFRVLERLLLALRNTTDEKIVLVSNYTSTLDLLQNLLRSRGLSYLRLDGTTPTNKRQ 611 Query: 99 CTIQEWNEGK---IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTR 155 + ++N S G GLNL G + L F L W+ Q + RI Sbjct: 612 ELVDQFNRTNSTTAFAFLLSAKSGGAGLNL-IGASRLALFDLDWNPATDAQAMARI---- 666 Query: 156 QRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + G +R V +Y ++ DE + QR TK + D +++ Sbjct: 667 -HRDGQRREVKIYRMLTTGCFDEKIYQRQLTKIGLADSVMD 706 >gi|225432997|ref|XP_002280814.1| PREDICTED: hypothetical protein [Vitis vinifera] Length = 1224 Score = 99.6 bits (247), Expect = 3e-19, Method: Composition-based stats. Identities = 43/177 (24%), Positives = 70/177 (39%), Gaps = 22/177 (12%) Query: 42 YDEEKHWKEVH--DEKIKALEVIIEKANAAPIIVAYHFNSDLARLQ----------KAFP 89 D EK+WKE E + LE I + IV + S L L+ + Sbjct: 1046 IDVEKNWKESSKISELLHCLERISQSRIGEKSIVFSQWTSFLDLLEIPLRRRGIGFLRYD 1105 Query: 90 QGRTLDKDPCTIQEWNE-GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMI 148 + ++E++E + +L + G GLNL N + WW+ +Q I Sbjct: 1106 GKVVQKQRERILKEFSETEEKTVLLMSLKAGGVGLNLTAASN-VFLMDPWWNPAVEEQAI 1164 Query: 149 ERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIHV 205 RI + G +R V V I ++T++E + Q K Q ++ AL E + Sbjct: 1165 MRI-----HRIGQERTVRVRRFIVKDTVEERMQQVQARK---QRMITGALTDEEVRT 1213 >gi|170572145|ref|XP_001891999.1| Potential global transcription activator SNF2L [Brugia malayi] gi|158603134|gb|EDP39180.1| Potential global transcription activator SNF2L, putative [Brugia malayi] Length = 1024 Score = 99.6 bits (247), Expect = 3e-19, Method: Composition-based stats. Identities = 43/230 (18%), Positives = 88/230 (38%), Gaps = 40/230 (17%) Query: 1 MKQY---HKFQRELYCDLQGENIEAFNSASKTVK---------CLQLANGAVYYD--EEK 46 +K Y K QRE Y + ++I+ N A K K + N +D E Sbjct: 396 VKIYVGLSKMQREWYTRILMKDIDVVNGAGKLEKARIMNILMHLRKCCNHPYLFDGAEPG 455 Query: 47 HWKEVHDEKIK--------ALEVIIEKANAAPIIVAYHFNSDLARL---------QKAFP 89 + ++ KA + +++ + L L + Sbjct: 456 PPYTTDQHLVDNSGKMVLLDKLLVKLKAQGSRVLIFSSMSRMLDLLEDYCWWRGYRYCRL 515 Query: 90 QGRTL-DKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 G+T+ D+ +I E+N+ + + G G+NL ++++ + W+ + Q Sbjct: 516 DGQTVHDERQKSIDEFNKPDSDKFIFMLTTRAGGLGINLT-AADVVIIYDSDWNPQVDLQ 574 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 ++R + G K+ V V+ I NT+DE +++R K + +++ Sbjct: 575 AMDR-----AHRIGQKKQVRVFRFITDNTVDERIIERAEMKLHLDSIVIQ 619 >gi|18400745|ref|NP_565587.1| PKL (PICKLE); ATPase/ DNA binding / DNA helicase [Arabidopsis thaliana] gi|75193642|sp|Q9S775|PKL_ARATH RecName: Full=CHD3-type chromatin-remodeling factor PICKLE; AltName: Full=Protein GYMNOS gi|6318930|gb|AAF07084.1|AF185578_1 GYMNOS/PICKLE [Arabidopsis thaliana] gi|6478518|gb|AAF13875.1|AF185577_1 chromatin remodeling factor CHD3 [Arabidopsis thaliana] gi|330252572|gb|AEC07666.1| CHD3-type chromatin-remodeling factor PICKLE [Arabidopsis thaliana] Length = 1384 Score = 99.6 bits (247), Expect = 3e-19, Method: Composition-based stats. Identities = 34/181 (18%), Positives = 71/181 (39%), Gaps = 22/181 (12%) Query: 39 AVYYDEEKHWKEVHDE--KIKALEVIIEKA--NAAPIIVAYHFNSDLARL---------Q 85 V +D + +K++ + K++ L+ ++ K +++ F L L Q Sbjct: 578 PVIHDANEAFKQLLESCGKLQLLDKMMVKLKEQGHRVLIYTQFQHMLDLLEDYCTHKKWQ 637 Query: 86 KAFPQGRTLDKDPCT-IQEWN--EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLE 142 G+ + I +N + G G+NL + ++ + W+ Sbjct: 638 YERIDGKVGGAERQIRIDRFNAKNSNKFCFLLSTRAGGLGINL-ATADTVIIYDSDWNPH 696 Query: 143 EHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKET 202 Q + R + G V +Y LI + TI+E ++Q + K ++ L++ LK + Sbjct: 697 ADLQAMAR-----AHRLGQTNKVMIYRLINRGTIEERMMQLTKKKMVLEHLVVGKLKTQN 751 Query: 203 I 203 I Sbjct: 752 I 752 >gi|298709602|emb|CBJ49249.1| similar to E1a binding protein P400 (Partial) [Ectocarpus siliculosus] Length = 2819 Score = 99.2 bits (246), Expect = 3e-19, Method: Composition-based stats. Identities = 30/167 (17%), Positives = 67/167 (40%), Gaps = 19/167 (11%) Query: 44 EEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAF---------PQGR 92 ++ + K++ L ++ ++ + L L++ G Sbjct: 1683 PDRRLVQYDAGKLQVLAGLLRSRKQGGHKCLIFTQMSRMLDVLEEFLTLHGHTYVRLDGS 1742 Query: 93 T-LDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 T ++K + +N + K+ S G G+NL G + ++F+ W+ Q Sbjct: 1743 TGVEKRQRLMDRFNLDPKLFCFILSTRSGGLGINLT-GADTVIFYDSDWNPAMDAQA--- 1798 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 R + G R V +Y L+ ++I+E +L++ + K + L++ A Sbjct: 1799 --QDRAHRIGQTREVHIYRLVTSSSIEENILKKAQQKRHLDFLVMTA 1843 >gi|320166021|gb|EFW42920.1| Ercc6 protein [Capsaspora owczarzaki ATCC 30864] Length = 1576 Score = 99.2 bits (246), Expect = 3e-19, Method: Composition-based stats. Identities = 30/161 (18%), Positives = 60/161 (37%), Gaps = 19/161 (11%) Query: 49 KEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQK----------AFPQGRTLDK 96 ++ K+ ++ ++ A +++ L +++ + Sbjct: 1034 RKDLSGKLVVIDSLLRMWHAQGHRVLLFAQTRQTLDIIERWVRSTAYRYRRMDGTTPIRS 1093 Query: 97 DPCTIQEWNEGK-IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTR 155 + E+N + + L G G+NL G + +V F W+ Q ER Sbjct: 1094 RQQMVDEFNTNESLFLFLLTTKVGGLGVNLT-GADRVVIFDPDWNPSTDTQARERAW--- 1149 Query: 156 QRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + G KR V VY L+ TI+E + R K + + +L+ Sbjct: 1150 --RIGQKRQVTVYRLLTAGTIEEKIYHRQIFKQFLTNRVLS 1188 >gi|297742732|emb|CBI35366.3| unnamed protein product [Vitis vinifera] Length = 907 Score = 99.2 bits (246), Expect = 3e-19, Method: Composition-based stats. Identities = 30/160 (18%), Positives = 63/160 (39%), Gaps = 25/160 (15%) Query: 50 EVHDEKIKALEVII--------EKANAAPIIVAYHFNSDLARLQKAF----PQGRTLDKD 97 E KI+A I+ E IV + S L ++ + Q R LD Sbjct: 726 EYSSSKIRAALEILQSHSYSNPETEGPIKAIVFSQWTSMLDLVEMSMNHSCIQYRRLDGT 785 Query: 98 ------PCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 ++++N + ++ ++ + GLN+ ++++ LWW+ Q ++R Sbjct: 786 MSLASRDRAVKDFNTDPEVTVMLMSLKAGNLGLNM-VAASLVILLDLWWNPTTEDQAVDR 844 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 + G R V V + ++T+++ +L K + Sbjct: 845 -----AHRIGQTRPVTVSRITIKDTVEDRILALQEDKRKM 879 >gi|198458681|ref|XP_002138575.1| GA24314 [Drosophila pseudoobscura pseudoobscura] gi|198136427|gb|EDY69133.1| GA24314 [Drosophila pseudoobscura pseudoobscura] Length = 3240 Score = 99.2 bits (246), Expect = 3e-19, Method: Composition-based stats. Identities = 29/156 (18%), Positives = 63/156 (40%), Gaps = 19/156 (12%) Query: 55 KIKALEVIIEKA--NAAPIIVAYHFNSDLARLQ---------KAFPQGRTLDKDPCTI-Q 102 K++ L+ ++ + + +++ L L+ G T + + + Sbjct: 1697 KLQTLDRLLRQLKVDGHRVLIFTQMTKMLDVLEAFLNHHGHIYLRLDGSTRVEQRQILME 1756 Query: 103 EWNEGK-IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGF 161 +N K I S G G+NL G + ++F+ W+ Q +R + G Sbjct: 1757 RFNGDKRIFCFILSTRSGGVGINLT-GADTVIFYDSDWNPTMDAQAQDRC-----HRIGQ 1810 Query: 162 KRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 R V +Y L+++ TI+ +L++ K + D+ + Sbjct: 1811 TRDVHIYRLVSEKTIEVNILKKANQKRMLSDMAIEG 1846 >gi|25412286|pir||B84645 hypothetical protein At2g25170 [imported] - Arabidopsis thaliana Length = 1359 Score = 99.2 bits (246), Expect = 3e-19, Method: Composition-based stats. Identities = 34/181 (18%), Positives = 71/181 (39%), Gaps = 22/181 (12%) Query: 39 AVYYDEEKHWKEVHDE--KIKALEVIIEKA--NAAPIIVAYHFNSDLARL---------Q 85 V +D + +K++ + K++ L+ ++ K +++ F L L Q Sbjct: 578 PVIHDANEAFKQLLESCGKLQLLDKMMVKLKEQGHRVLIYTQFQHMLDLLEDYCTHKKWQ 637 Query: 86 KAFPQGRTLDKDPCT-IQEWN--EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLE 142 G+ + I +N + G G+NL + ++ + W+ Sbjct: 638 YERIDGKVGGAERQIRIDRFNAKNSNKFCFLLSTRAGGLGINL-ATADTVIIYDSDWNPH 696 Query: 143 EHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKET 202 Q + R + G V +Y LI + TI+E ++Q + K ++ L++ LK + Sbjct: 697 ADLQAMAR-----AHRLGQTNKVMIYRLINRGTIEERMMQLTKKKMVLEHLVVGKLKTQN 751 Query: 203 I 203 I Sbjct: 752 I 752 >gi|224095220|ref|XP_002310362.1| chromatin remodeling complex subunit [Populus trichocarpa] gi|222853265|gb|EEE90812.1| chromatin remodeling complex subunit [Populus trichocarpa] Length = 923 Score = 99.2 bits (246), Expect = 3e-19, Method: Composition-based stats. Identities = 24/139 (17%), Positives = 52/139 (37%), Gaps = 17/139 (12%) Query: 63 IEKANAAPIIVAYHFNSDLARLQ----------KAFPQGRTLDKDPCTIQEWN-EGKIPL 111 + IV + S L ++ + TL ++++N + ++ + Sbjct: 763 LSTEGPIKAIVFSQWTSMLDLVEFSLNQHCIQYRRLDGTMTLSSRDKAVKDFNTDPEVTV 822 Query: 112 LFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLI 171 + + GLN+ ++ LWW+ Q I+R + G R V V L Sbjct: 823 MLMSLKAGNLGLNM-VAACHVILLDLWWNPTTEDQAIDR-----AHRIGQTRPVTVTRLT 876 Query: 172 AQNTIDELVLQRLRTKSTI 190 ++T+++ +L K + Sbjct: 877 IKDTVEDRILALQDEKRKM 895 >gi|158261897|dbj|BAF83126.1| unnamed protein product [Homo sapiens] Length = 910 Score = 99.2 bits (246), Expect = 3e-19, Method: Composition-based stats. Identities = 30/166 (18%), Positives = 64/166 (38%), Gaps = 22/166 (13%) Query: 50 EVHDEKIKALEVIIEKANA----APIIVAYHFNSDLARLQK----------AFPQGRTLD 95 E K++ L ++ + +++ ++ L LQ+ + Sbjct: 638 EKESGKLQVLSKLLAVIHELRPTEKVVLVSNYTQTLNILQEVCKRHGYAYTRLDGQTPIS 697 Query: 96 KDPCTIQEWNE--GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGV 153 + + +N + + G GLNL GG+ L+ + + W+ Q + R+ Sbjct: 698 QRQQIVDGFNSQHSSFFIFLLSSKAGGVGLNL-IGGSHLILYDIDWNPATDIQAMSRVW- 755 Query: 154 TRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 + G K V +Y L+ TI+E + QR +K + +++ K Sbjct: 756 ----RDGQKYPVHIYRLLTTGTIEEKIYQRQISKQGLCGAVVDLTK 797 >gi|327532753|ref|NP_001192192.1| DNA repair and recombination protein RAD54B 3 [Homo sapiens] gi|119612118|gb|EAW91712.1| hCG2009220, isoform CRA_b [Homo sapiens] Length = 726 Score = 99.2 bits (246), Expect = 3e-19, Method: Composition-based stats. Identities = 30/166 (18%), Positives = 64/166 (38%), Gaps = 22/166 (13%) Query: 50 EVHDEKIKALEVIIEKANA----APIIVAYHFNSDLARLQK----------AFPQGRTLD 95 E K++ L ++ + +++ ++ L LQ+ + Sbjct: 454 EKESGKLQVLSKLLAVIHELRPTEKVVLVSNYTQTLNILQEVCKRHGYAYTRLDGQTPIS 513 Query: 96 KDPCTIQEWNE--GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGV 153 + + +N + + G GLNL GG+ L+ + + W+ Q + R+ Sbjct: 514 QRQQIVDGFNSQHSSFFIFLLSSKAGGVGLNL-IGGSHLILYDIDWNPATDIQAMSRVW- 571 Query: 154 TRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 + G K V +Y L+ TI+E + QR +K + +++ K Sbjct: 572 ----RDGQKYPVHIYRLLTTGTIEEKIYQRQISKQGLCGAVVDLTK 613 >gi|119612120|gb|EAW91714.1| hCG2009220, isoform CRA_d [Homo sapiens] Length = 499 Score = 99.2 bits (246), Expect = 3e-19, Method: Composition-based stats. Identities = 30/166 (18%), Positives = 64/166 (38%), Gaps = 22/166 (13%) Query: 50 EVHDEKIKALEVIIEKANA----APIIVAYHFNSDLARLQK----------AFPQGRTLD 95 E K++ L ++ + +++ ++ L LQ+ + Sbjct: 227 EKESGKLQVLSKLLAVIHELRPTEKVVLVSNYTQTLNILQEVCKRHGYAYTRLDGQTPIS 286 Query: 96 KDPCTIQEWNE--GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGV 153 + + +N + + G GLNL GG+ L+ + + W+ Q + R+ Sbjct: 287 QRQQIVDGFNSQHSSFFIFLLSSKAGGVGLNL-IGGSHLILYDIDWNPATDIQAMSRVW- 344 Query: 154 TRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 + G K V +Y L+ TI+E + QR +K + +++ K Sbjct: 345 ----RDGQKYPVHIYRLLTTGTIEEKIYQRQISKQGLCGAVVDLTK 386 >gi|114620947|ref|XP_528193.2| PREDICTED: RAD54 homolog B isoform 2 [Pan troglodytes] gi|114620949|ref|XP_001142757.1| PREDICTED: RAD54 homolog B isoform 1 [Pan troglodytes] Length = 910 Score = 99.2 bits (246), Expect = 3e-19, Method: Composition-based stats. Identities = 30/166 (18%), Positives = 64/166 (38%), Gaps = 22/166 (13%) Query: 50 EVHDEKIKALEVIIEKANA----APIIVAYHFNSDLARLQK----------AFPQGRTLD 95 E K++ L ++ + +++ ++ L LQ+ + Sbjct: 638 EKESGKLQVLSKLLAVIHELRPTEKVVLVSNYTQTLNILQEVCKRHGYAYTRLDGQTPIS 697 Query: 96 KDPCTIQEWNE--GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGV 153 + + +N + + G GLNL GG+ L+ + + W+ Q + R+ Sbjct: 698 QRQQIVDGFNSQHSSFFIFLLSSKAGGVGLNL-IGGSHLILYDIDWNPATDIQAMSRVW- 755 Query: 154 TRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 + G K V +Y L+ TI+E + QR +K + +++ K Sbjct: 756 ----RDGQKYPVHIYRLLTTGTIEEKIYQRQISKQGLCGAVVDLTK 797 >gi|6912622|ref|NP_036547.1| DNA repair and recombination protein RAD54B 1 [Homo sapiens] gi|51316548|sp|Q9Y620|RA54B_HUMAN RecName: Full=DNA repair and recombination protein RAD54B; AltName: Full=RAD54 homolog B gi|4959396|gb|AAD34331.1|AF112481_1 RAD54B protein [Homo sapiens] gi|12805023|gb|AAH01965.1| RAD54 homolog B (S. cerevisiae) [Homo sapiens] gi|119612119|gb|EAW91713.1| hCG2009220, isoform CRA_c [Homo sapiens] gi|261859006|dbj|BAI46025.1| RAD54 homolog B [synthetic construct] Length = 910 Score = 99.2 bits (246), Expect = 3e-19, Method: Composition-based stats. Identities = 30/166 (18%), Positives = 64/166 (38%), Gaps = 22/166 (13%) Query: 50 EVHDEKIKALEVIIEKANA----APIIVAYHFNSDLARLQK----------AFPQGRTLD 95 E K++ L ++ + +++ ++ L LQ+ + Sbjct: 638 EKESGKLQVLSKLLAVIHELRPTEKVVLVSNYTQTLNILQEVCKRHGYAYTRLDGQTPIS 697 Query: 96 KDPCTIQEWNE--GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGV 153 + + +N + + G GLNL GG+ L+ + + W+ Q + R+ Sbjct: 698 QRQQIVDGFNSQHSSFFIFLLSSKAGGVGLNL-IGGSHLILYDIDWNPATDIQAMSRVW- 755 Query: 154 TRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 + G K V +Y L+ TI+E + QR +K + +++ K Sbjct: 756 ----RDGQKYPVHIYRLLTTGTIEEKIYQRQISKQGLCGAVVDLTK 797 >gi|326481296|gb|EGE05306.1| serine/threonine protein kinase [Trichophyton equinum CBS 127.97] Length = 1690 Score = 99.2 bits (246), Expect = 3e-19, Method: Composition-based stats. Identities = 30/166 (18%), Positives = 68/166 (40%), Gaps = 19/166 (11%) Query: 44 EEKHWKEVHDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAF---------PQGR 92 +K + K++ L+ ++ +A ++ L L++ G Sbjct: 1340 PDKRLLQYDCGKLQQLDKLLRKLQAGGHRALIFTQMTKMLDILEQFLNIHGHRYLRLDGS 1399 Query: 93 TLDKDPCTI--QEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 T + + + N+ +I S G G+NL G + ++F+ L W+ +Q +R Sbjct: 1400 TKIEQRQLLTERFNNDTRILAFILSSRSGGLGINLT-GADTVIFYDLDWNPAMDKQCQDR 1458 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + G R V +Y +++ TI+ +L++ K + D+++ Sbjct: 1459 C-----HRIGQTRDVHIYRFVSEYTIESNILRKANQKRMLDDVVIQ 1499 >gi|289613314|emb|CBI59727.1| unnamed protein product [Sordaria macrospora] Length = 1846 Score = 99.2 bits (246), Expect = 3e-19, Method: Composition-based stats. Identities = 28/156 (17%), Positives = 66/156 (42%), Gaps = 14/156 (8%) Query: 44 EEKHWKEVHDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTI 101 +K + K++AL+ ++ +A ++ L +++ Sbjct: 1501 PDKRLLQYDCGKLQALDKLLRKLQAGGHRALIFTQMTKYL-----RLDGATKVEQRQILT 1555 Query: 102 QEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 +N + +I S G G+NL G + ++F+ W+ +Q +R + G Sbjct: 1556 DRFNHDPRILCFILSTRSGGLGINLT-GADTVIFYDQDWNPAMDKQCQDRC-----HRIG 1609 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 R V +Y L++++TI+ +L++ K + D+++ Sbjct: 1610 QTRDVHIYRLVSEHTIEANILRKASQKQMLDDVVIQ 1645 >gi|260951227|ref|XP_002619910.1| hypothetical protein CLUG_01069 [Clavispora lusitaniae ATCC 42720] gi|238847482|gb|EEQ36946.1| hypothetical protein CLUG_01069 [Clavispora lusitaniae ATCC 42720] Length = 1061 Score = 99.2 bits (246), Expect = 3e-19, Method: Composition-based stats. Identities = 36/167 (21%), Positives = 66/167 (39%), Gaps = 21/167 (12%) Query: 41 YYDEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAF---------P 89 Y +++ W K+ L +I++ I+V F L L+K Sbjct: 879 YVLDKEKWH--DSGKVAKLLDLIKQTIMKKEKILVFSLFTQMLDILEKVLSFANISFLRL 936 Query: 90 QGRTLDKDPCTI--QEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQM 147 G+T I + + + IP+ + G G+NL N+++ F ++ + +Q Sbjct: 937 DGQTSVDTRQDIIDRFYEDEDIPVFLLSTKAGGFGINLVAANNVVI-FDQSFNPHDDKQA 995 Query: 148 IERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 +R + G V V LI++NTIDE +L K + + Sbjct: 996 EDR-----AHRVGQTNEVMVTKLISENTIDENILMLAENKLQLDQSI 1037 >gi|154271055|ref|XP_001536381.1| DNA repair and recombination protein RAD26 [Ajellomyces capsulatus NAm1] gi|150409604|gb|EDN05048.1| DNA repair and recombination protein RAD26 [Ajellomyces capsulatus NAm1] Length = 1275 Score = 99.2 bits (246), Expect = 3e-19, Method: Composition-based stats. Identities = 29/163 (17%), Positives = 59/163 (36%), Gaps = 20/163 (12%) Query: 53 DEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQ-----------KAFPQGRTLDKDPC 99 K++ ++ ++E + ++ L L+ + + Sbjct: 770 SGKMQVVKSLLELWRDTGHKTLLFTQHRIMLDILERFIISMGGFKYQRMDGNTPIKFRQK 829 Query: 100 TIQEWNE-GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQ 158 + E+N I + G G+NL G + ++ + W+ Q ER + Sbjct: 830 MVDEFNNNPDIHVFLLTTKVGGLGVNLT-GADRVIIYDPDWNPSTDVQARERAW-----R 883 Query: 159 AGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 G KR V +Y L+ TI+E + R K + + +L K+ Sbjct: 884 LGQKREVTIYRLMTAGTIEEKIYHRQIFKQFLTNKILKDPKQR 926 >gi|115491909|ref|XP_001210582.1| hypothetical protein ATEG_00496 [Aspergillus terreus NIH2624] gi|114197442|gb|EAU39142.1| hypothetical protein ATEG_00496 [Aspergillus terreus NIH2624] Length = 894 Score = 99.2 bits (246), Expect = 3e-19, Method: Composition-based stats. Identities = 28/170 (16%), Positives = 62/170 (36%), Gaps = 20/170 (11%) Query: 44 EEKHWKEVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQKAFPQGR--------- 92 + K+ L+ ++ I++ F + L LQ Q R Sbjct: 642 DIDESLVTASGKMLLLDRLVSCLLKKEHKILIFSQFKTQLDILQDWATQLRSWNCCRIDG 701 Query: 93 ---TLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIE 149 D+ + K + + G G+NL + ++ + W+ ++ Q Sbjct: 702 AISQSDRREQIKAFNTDPKFKIFLLSTRAGGQGINLT-AADTVILYDSDWNPQQDLQA-- 758 Query: 150 RIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 R + G + V VY L + T+++ +L++ +K ++ L++ K Sbjct: 759 ---QDRAHRIGQTKPVIVYRLATKGTVEQTLLEKADSKRRLERLVIQKGK 805 >gi|301093032|ref|XP_002997365.1| DNA repair and recombination protein RAD26 [Phytophthora infestans T30-4] gi|262110763|gb|EEY68815.1| DNA repair and recombination protein RAD26 [Phytophthora infestans T30-4] Length = 1039 Score = 99.2 bits (246), Expect = 3e-19, Method: Composition-based stats. Identities = 34/157 (21%), Positives = 59/157 (37%), Gaps = 20/157 (12%) Query: 55 KIKALEVIIE--KANAAPIIVAYHFNSDLARLQ-----KAFPQGRT-----LDKDPCTIQ 102 K+ LE ++ K ++ L +Q KA R +++ + Sbjct: 669 KMIVLEKLLSVWKKRRQRTLIFSRSTRMLDIIQLFLITKATKYSRLDGNTKVEERLQMVN 728 Query: 103 EWNEGK--IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 ++N + + + G GLNLQ N+++ F W+ Q R + G Sbjct: 729 DFNSSESNTTVFLISTRAGGVGLNLQSATNVVI-FDPSWNPAHDCQA-----QDRAYRIG 782 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + V VY LI TI+E++ R K + D L Sbjct: 783 QTKDVQVYRLITLGTIEEMIYVRQIYKQQLSDTTLKG 819 >gi|326476006|gb|EGE00016.1| serine/threonine protein kinase [Trichophyton tonsurans CBS 112818] Length = 1690 Score = 99.2 bits (246), Expect = 3e-19, Method: Composition-based stats. Identities = 30/166 (18%), Positives = 68/166 (40%), Gaps = 19/166 (11%) Query: 44 EEKHWKEVHDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAF---------PQGR 92 +K + K++ L+ ++ +A ++ L L++ G Sbjct: 1340 PDKRLLQYDCGKLQQLDKLLRKLQAGGHRALIFTQMTKMLDILEQFLNIHGHRYLRLDGS 1399 Query: 93 TLDKDPCTI--QEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 T + + + N+ +I S G G+NL G + ++F+ L W+ +Q +R Sbjct: 1400 TKIEQRQLLTERFNNDTRILAFILSSRSGGLGINLT-GADTVIFYDLDWNPAMDKQCQDR 1458 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + G R V +Y +++ TI+ +L++ K + D+++ Sbjct: 1459 C-----HRIGQTRDVHIYRFVSEYTIESNILRKANQKRMLDDVVIQ 1499 >gi|312079660|ref|XP_003142270.1| transcription activator [Loa loa] gi|307762566|gb|EFO21800.1| transcription activator [Loa loa] Length = 1062 Score = 99.2 bits (246), Expect = 3e-19, Method: Composition-based stats. Identities = 42/230 (18%), Positives = 87/230 (37%), Gaps = 40/230 (17%) Query: 1 MKQY---HKFQRELYCDLQGENIEAFNSASKTVK---------CLQLANGAVYYD--EEK 46 +K Y K QRE Y + ++I+ N A K K + N +D E Sbjct: 396 VKIYVGLSKMQREWYTKILMKDIDVVNGAGKLEKARIMNILMHLRKCCNHPYLFDGAEPG 455 Query: 47 HWKEVHDEKIK--------ALEVIIEKANAAPIIVAYHFNSDLARL---------QKAFP 89 + ++ K + +++ + L L + Sbjct: 456 PPYTTDQHLVDNSGKMVLLDKLLVKLKEQGSRVLIFSSMSRMLDLLEDYCWWRSYRYCRL 515 Query: 90 QGRTL-DKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 G+T+ D+ +I E+N+ + + G G+NL ++++ + W+ + Q Sbjct: 516 DGQTVHDERQKSIDEFNKPDSDKFIFMLTTRAGGLGINLT-AADVVIIYDSDWNPQVDLQ 574 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 ++R + G K+ V V+ I NT+DE +++R K + +++ Sbjct: 575 AMDR-----AHRIGQKKQVRVFRFITDNTVDERIIERAEMKLHLDSIVIQ 619 >gi|83774254|dbj|BAE64379.1| unnamed protein product [Aspergillus oryzae] Length = 1590 Score = 99.2 bits (246), Expect = 3e-19, Method: Composition-based stats. Identities = 30/166 (18%), Positives = 67/166 (40%), Gaps = 19/166 (11%) Query: 44 EEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAF---------PQGR 92 +K + K++ L+ ++ A ++ L L++ G Sbjct: 1265 PDKRLLQYDCGKLQRLDKLLRDLKAGGHRALIFTQMTKMLDILEQFLNIHGHRYLRLDGT 1324 Query: 93 TLDKDPCTI--QEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 T + + + N+ +I S G G+NL G + ++F+ L W+ +Q +R Sbjct: 1325 TKVEQRQILTDRFNNDSRILAFILSSRSGGLGINLT-GADTVIFYDLDWNPAMDKQCQDR 1383 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + G R V +Y +++ TI+ +L++ K + D+++ Sbjct: 1384 C-----HRIGQTRDVHIYRFVSEYTIESNILRKANQKRMLDDVVIQ 1424 >gi|156839119|ref|XP_001643254.1| hypothetical protein Kpol_1063p6 [Vanderwaltozyma polyspora DSM 70294] gi|156113856|gb|EDO15396.1| hypothetical protein Kpol_1063p6 [Vanderwaltozyma polyspora DSM 70294] Length = 849 Score = 99.2 bits (246), Expect = 3e-19, Method: Composition-based stats. Identities = 32/167 (19%), Positives = 71/167 (42%), Gaps = 20/167 (11%) Query: 52 HDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQ--------KAFPQGRTLDKDP--C 99 K++ ++ +I ++V F + L L+ ++F T+D + Sbjct: 597 TSGKLQTMQDLILPLVKKKHKVLVFSQFTNMLDLLEDWCELNSLESFRIDGTIDSESRKE 656 Query: 100 TIQEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 I+++N+ K + + G G+NL + +V F W+ + Q ++R Sbjct: 657 QIEQFNKPGDKHNIFLLSTRAAGLGINL-IAADTVVLFDSDWNPQVDLQAMDRC-----Y 710 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIH 204 + G + V VY L NT++ ++L R K ++ +++ + T+ Sbjct: 711 RIGQIKPVVVYRLCCDNTVEHVILTRAANKRKLEKMVIQMGRFNTLK 757 >gi|327273932|ref|XP_003221733.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5-like [Anolis carolinensis] Length = 1036 Score = 99.2 bits (246), Expect = 3e-19, Method: Composition-based stats. Identities = 44/230 (19%), Positives = 88/230 (38%), Gaps = 40/230 (17%) Query: 1 MKQY---HKFQRELYCDLQGENIEAFNSASKTVK------CLQL--ANGAVYYDEEKHW- 48 +K Y K QRE Y + ++I+ NSA K K +QL Y + Sbjct: 393 VKIYVGLSKMQREWYTRILMKDIDILNSAGKLDKMRLLNILMQLRKCCNHPYLFDGAEPG 452 Query: 49 --------KEVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQ---------KAFP 89 + K+ L+ ++ K + I++ L L+ Sbjct: 453 PPYTTDMHLVTNSGKMVVLDKLLPKLKEQGSRILIFSQMTRVLDILEDYCMWRNYEYCRL 512 Query: 90 QGRTL-DKDPCTIQEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 G+T D+ +I +NE + + G G+NL ++++ + W+ + Q Sbjct: 513 DGQTPHDERQASINAYNEPGSSKFVFMLSTRAGGLGINL-ATADVVILYDSDWNPQVDLQ 571 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 ++R + G + V V+ I NT++E +++R K + +++ Sbjct: 572 AMDR-----AHRIGQTKTVRVFRFITDNTVEERIVERAEMKLRLDSIVIQ 616 >gi|302511611|ref|XP_003017757.1| hypothetical protein ARB_04640 [Arthroderma benhamiae CBS 112371] gi|291181328|gb|EFE37112.1| hypothetical protein ARB_04640 [Arthroderma benhamiae CBS 112371] Length = 1706 Score = 99.2 bits (246), Expect = 3e-19, Method: Composition-based stats. Identities = 30/166 (18%), Positives = 68/166 (40%), Gaps = 19/166 (11%) Query: 44 EEKHWKEVHDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAF---------PQGR 92 +K + K++ L+ ++ +A ++ L L++ G Sbjct: 1356 PDKRLLQYDCGKLQQLDKLLRKLQAGGHRALIFTQMTKMLDILEQFLNIHGHRYLRLDGS 1415 Query: 93 TLDKDPCTI--QEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 T + + + N+ +I S G G+NL G + ++F+ L W+ +Q +R Sbjct: 1416 TKIEQRQLLTERFNNDTRILAFILSSRSGGLGINLT-GADTVIFYDLDWNPAMDKQCQDR 1474 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + G R V +Y +++ TI+ +L++ K + D+++ Sbjct: 1475 C-----HRIGQTRDVHIYRFVSEYTIESNILRKANQKRMLDDVVIQ 1515 >gi|255725568|ref|XP_002547713.1| conserved hypothetical protein [Candida tropicalis MYA-3404] gi|240135604|gb|EER35158.1| conserved hypothetical protein [Candida tropicalis MYA-3404] Length = 847 Score = 99.2 bits (246), Expect = 3e-19, Method: Composition-based stats. Identities = 35/166 (21%), Positives = 63/166 (37%), Gaps = 19/166 (11%) Query: 44 EEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQK----------AFPQG 91 EEK + KI L ++ + A I++ ++ L L+K Sbjct: 541 EEKFHLTLSSGKINVLIPLLLEIVAQKEKIVLISNYTQTLDLLEKVLSKINLTFSRLDGS 600 Query: 92 RTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 + ++++N I + S G G+NL G + L+ F W+ Q + R Sbjct: 601 TATNIRSKIVKQFNSNPNIHVFLLSSKSGGMGINL-VGASRLILFDNDWNPATDLQSMSR 659 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 I + G + F+Y + IDE + QR K+ + L+ Sbjct: 660 I-----HRDGQTKPCFIYRIFTTGCIDEKIFQRQLVKNRLSSKFLD 700 >gi|294947224|ref|XP_002785281.1| chromodomain helicase dna binding protein, putative [Perkinsus marinus ATCC 50983] gi|239899054|gb|EER17077.1| chromodomain helicase dna binding protein, putative [Perkinsus marinus ATCC 50983] Length = 945 Score = 99.2 bits (246), Expect = 3e-19, Method: Composition-based stats. Identities = 26/160 (16%), Positives = 61/160 (38%), Gaps = 20/160 (12%) Query: 53 DEKIKALEVIIEKANAAP--IIVAYHFNSDLARLQ----------KAFPQGRTLDKDPCT 100 K+ LE +I + +++ F L ++ + + K Sbjct: 398 SGKLVFLEKLIPQLREKKEKLLIFSQFKIVLDIIEDWLTWKKLPVERLDGSVSGGKRQAA 457 Query: 101 IQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQ 158 I +N+ K + G G+NL +++V + W+ + Q R + Sbjct: 458 IDRFNDKKHDSFAFLLTTRAGGVGINLT-SASVVVIYDSDWNPQNDNQAQARC-----HR 511 Query: 159 AGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNAL 198 G + V VY L+ +N+ +E + + K ++ +++++ Sbjct: 512 IGQTKTVRVYRLLTRNSYEEKLFEIASKKLGLEQAIMSSV 551 >gi|207346437|gb|EDZ72930.1| YDR334Wp-like protein [Saccharomyces cerevisiae AWRI1631] Length = 1514 Score = 99.2 bits (246), Expect = 3e-19, Method: Composition-based stats. Identities = 31/181 (17%), Positives = 75/181 (41%), Gaps = 19/181 (10%) Query: 29 TVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQK 86 + QL +K + K++ L +++++ N ++ L L++ Sbjct: 1221 SNPLHQLQTKLTIAFPDKSLLQYDCGKLQKLAILLQQLKDNGHRALIFTQMTKVLDVLEQ 1280 Query: 87 AF---------PQGRTLDKDPCTI-QEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFF 135 G T +D + + +N + +I + S G G+NL G + ++F+ Sbjct: 1281 FLNYHGYLYMRLDGATKIEDRQILTERFNTDSRITVFILSSRSGGLGINLT-GADTVIFY 1339 Query: 136 SLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 W+ +Q +R + G R V +Y ++++TI+ +L++ K + ++++ Sbjct: 1340 DSDWNPAMDKQCQDRC-----HRIGQTRDVHIYRFVSEHTIESNILKKANQKRQLDNVVI 1394 Query: 196 N 196 Sbjct: 1395 Q 1395 >gi|325188450|emb|CCA22986.1| hypothetical protein SELMODRAFT_450747 [Albugo laibachii Nc14] Length = 1623 Score = 99.2 bits (246), Expect = 3e-19, Method: Composition-based stats. Identities = 29/165 (17%), Positives = 68/165 (41%), Gaps = 19/165 (11%) Query: 44 EEKHWKEVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQK----------AFPQG 91 +K + K++ L V++ + ++ S L L++ Sbjct: 872 PDKKLVQFDCGKLQELAVLLCRLRREGHRCLIFTQMTSMLNILEQFLNLHGHTYFRLDGS 931 Query: 92 RTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 ++K ++++N + I S G G+NL G + ++F+ W+ Q Sbjct: 932 TRVEKRQMLMEKFNQDSSIFCFILSTRSGGLGINLT-GADTVIFYDSDWNPAMDAQA--- 987 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 R + G R V +Y L+ +T+++ +L++ + K ++ L++ Sbjct: 988 --QDRAHRIGQTREVHIYRLVTLSTVEDNILRKAQQKRNLETLVM 1030 >gi|119178020|ref|XP_001240720.1| hypothetical protein CIMG_07883 [Coccidioides immitis RS] Length = 1198 Score = 99.2 bits (246), Expect = 3e-19, Method: Composition-based stats. Identities = 30/163 (18%), Positives = 59/163 (36%), Gaps = 20/163 (12%) Query: 53 DEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQK-----------AFPQGRTLDKDPC 99 K++ ++ ++E + ++ L L+K + Sbjct: 737 SGKMQVVKALLELWRDTGHKTLLFAQHRIMLDILEKFIKSLTGFNYRRMDGNTPIKVRQG 796 Query: 100 TIQEWNE-GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQ 158 + E+N I + G G+NL G + ++ + W+ Q ER + Sbjct: 797 MVDEFNNDPDIHVFLLTTKVGGLGVNLT-GADRVIIYDPDWNPSTDLQARERAW-----R 850 Query: 159 AGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 G KR V +Y L+ TI+E + R K + + +L K+ Sbjct: 851 LGQKREVTIYRLMTAGTIEEKIYHRQIFKQFLTNKILKDPKQR 893 >gi|118781335|ref|XP_311417.3| AGAP010700-PA [Anopheles gambiae str. PEST] gi|116130122|gb|EAA07020.3| AGAP010700-PA [Anopheles gambiae str. PEST] Length = 1026 Score = 99.2 bits (246), Expect = 3e-19, Method: Composition-based stats. Identities = 44/222 (19%), Positives = 89/222 (40%), Gaps = 37/222 (16%) Query: 6 KFQRELYCDLQGENIEAFNSASKTVK------CLQL---ANGAVYYDE-------EKHWK 49 K QRE Y + ++I+ N A K K +QL N +D + Sbjct: 367 KMQREWYTKILMKDIDVVNGAGKVEKMRLQNILMQLRKCTNHPYLFDGAEPGPPYTTDYH 426 Query: 50 EVHDE-KIKALEVIIEKAN--AAPIIVAYHFNSDLARL---------QKAFPQGRTLDKD 97 + + K+ L+ ++ K + +++ L L Q G+T +D Sbjct: 427 LLENAGKMVVLDKLLRKLQEQDSRVLIFSQMTRMLDILEDFCHWRGYQYCRLDGQTPHED 486 Query: 98 -PCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 I ++N + + G G+NL ++++ + W+ + Q ++R Sbjct: 487 RSNMIADYNAENSTKFIFMLSTRAGGLGINL-ATADVVIIYDSDWNPQMDLQAMDR---- 541 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + G K+ V V+ LI +NT++E +++R K + L++ Sbjct: 542 -AHRIGQKKQVRVFRLITENTVEEKIVERAEVKLKLDKLVIQ 582 >gi|70982085|ref|XP_746571.1| DNA repair protein Rhp26/Rad26 [Aspergillus fumigatus Af293] gi|66844194|gb|EAL84533.1| DNA repair protein Rhp26/Rad26, putative [Aspergillus fumigatus Af293] gi|159122195|gb|EDP47317.1| DNA repair protein Rhp26/Rad26, putative [Aspergillus fumigatus A1163] Length = 1214 Score = 99.2 bits (246), Expect = 3e-19, Method: Composition-based stats. Identities = 31/163 (19%), Positives = 59/163 (36%), Gaps = 20/163 (12%) Query: 53 DEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQK-----------AFPQGRTLDKDPC 99 K++ ++ ++E + ++ L L+K + Sbjct: 759 SGKMQVVKSLLELWRDTGHKTLLFAQHRIMLDILEKFVRSLSGFNYRRMDGTTPIQNRQT 818 Query: 100 TIQEWNE-GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQ 158 + E+N I + G G+NL G + ++ + W+ Q ER + Sbjct: 819 MVDEFNNDPNIHVFLLTTKVGGLGVNLT-GADRVIIYDPDWNPSTDVQARERAW-----R 872 Query: 159 AGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 G KR V VY L+ TI+E + R K + + +L K+ Sbjct: 873 LGQKRDVSVYRLMTAGTIEEKIYHRQIFKQFLTNKILRDPKQR 915 >gi|323349205|gb|EGA83435.1| Swr1p [Saccharomyces cerevisiae Lalvin QA23] Length = 1469 Score = 99.2 bits (246), Expect = 3e-19, Method: Composition-based stats. Identities = 31/181 (17%), Positives = 75/181 (41%), Gaps = 19/181 (10%) Query: 29 TVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQK 86 + QL +K + K++ L +++++ N ++ L L++ Sbjct: 1176 SNPLHQLQTKLTIAFPDKSLLQYDCGKLQKLAILLQQLKDNGHRALIFTQMTKVLDVLEQ 1235 Query: 87 AF---------PQGRTLDKDPCTI-QEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFF 135 G T +D + + +N + +I + S G G+NL G + ++F+ Sbjct: 1236 FLNYHGYLYMRLDGATKIEDRQILTERFNTDSRITVFILSSRSGGLGINLT-GADTVIFY 1294 Query: 136 SLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 W+ +Q +R + G R V +Y ++++TI+ +L++ K + ++++ Sbjct: 1295 DSDWNPAMDKQCQDRC-----HRIGQTRDVHIYRFVSEHTIESNILKKANQKRQLDNVVI 1349 Query: 196 N 196 Sbjct: 1350 Q 1350 >gi|190404725|gb|EDV07992.1| helicase SWR1 [Saccharomyces cerevisiae RM11-1a] Length = 1514 Score = 99.2 bits (246), Expect = 3e-19, Method: Composition-based stats. Identities = 31/181 (17%), Positives = 75/181 (41%), Gaps = 19/181 (10%) Query: 29 TVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQK 86 + QL +K + K++ L +++++ N ++ L L++ Sbjct: 1221 SNPLHQLQTKLTIAFPDKSLLQYDCGKLQKLAILLQQLKDNGHRALIFTQMTKVLDVLEQ 1280 Query: 87 AF---------PQGRTLDKDPCTI-QEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFF 135 G T +D + + +N + +I + S G G+NL G + ++F+ Sbjct: 1281 FLNYHGYLYMRLDGATKIEDRQILTERFNTDSRITVFILSSRSGGLGINLT-GADTVIFY 1339 Query: 136 SLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 W+ +Q +R + G R V +Y ++++TI+ +L++ K + ++++ Sbjct: 1340 DSDWNPAMDKQCQDRC-----HRIGQTRDVHIYRFVSEHTIESNILKKANQKRQLDNVVI 1394 Query: 196 N 196 Sbjct: 1395 Q 1395 >gi|6320541|ref|NP_010621.1| Swr1p [Saccharomyces cerevisiae S288c] gi|6136666|sp|Q05471|SWR1_YEAST RecName: Full=Helicase SWR1; AltName: Full=Swi2/Snf2-related 1 gi|1230661|gb|AAB64770.1| Ydr334wp [Saccharomyces cerevisiae] gi|151942310|gb|EDN60666.1| SWR1 complex component [Saccharomyces cerevisiae YJM789] gi|285811352|tpg|DAA12176.1| TPA: Swr1p [Saccharomyces cerevisiae S288c] Length = 1514 Score = 99.2 bits (246), Expect = 3e-19, Method: Composition-based stats. Identities = 31/181 (17%), Positives = 75/181 (41%), Gaps = 19/181 (10%) Query: 29 TVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQK 86 + QL +K + K++ L +++++ N ++ L L++ Sbjct: 1221 SNPLHQLQTKLTIAFPDKSLLQYDCGKLQKLAILLQQLKDNGHRALIFTQMTKVLDVLEQ 1280 Query: 87 AF---------PQGRTLDKDPCTI-QEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFF 135 G T +D + + +N + +I + S G G+NL G + ++F+ Sbjct: 1281 FLNYHGYLYMRLDGATKIEDRQILTERFNTDSRITVFILSSRSGGLGINLT-GADTVIFY 1339 Query: 136 SLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 W+ +Q +R + G R V +Y ++++TI+ +L++ K + ++++ Sbjct: 1340 DSDWNPAMDKQCQDRC-----HRIGQTRDVHIYRFVSEHTIESNILKKANQKRQLDNVVI 1394 Query: 196 N 196 Sbjct: 1395 Q 1395 >gi|323454538|gb|EGB10408.1| hypothetical protein AURANDRAFT_23375 [Aureococcus anophagefferens] Length = 685 Score = 99.2 bits (246), Expect = 3e-19, Method: Composition-based stats. Identities = 28/141 (19%), Positives = 58/141 (41%), Gaps = 18/141 (12%) Query: 68 AAPIIVAYHFNSDLARLQKAF---------PQGRTLDKDPCT-IQEWNEG--KIPLLFAH 115 ++V + L L+ G T ++ I+ +N + Sbjct: 459 GHRVLVFSQMTALLDVLEDFMAMRDYEYCRIDGNTSYEERDDLIEAYNAPNSDKFVFLLS 518 Query: 116 PASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNT 175 + G G+NLQ + +V + W+ + Q ++R + G K+ V VY L+ NT Sbjct: 519 TRAGGLGINLQT-ADTVVLYDSDWNPQADLQAMDR-----AHRIGQKKPVHVYRLVTANT 572 Query: 176 IDELVLQRLRTKSTIQDLLLN 196 I+E +++R + K + +++ Sbjct: 573 IEEKIVERAKKKLKLDAMVVQ 593 >gi|256269512|gb|EEU04799.1| Swr1p [Saccharomyces cerevisiae JAY291] gi|259145571|emb|CAY78835.1| Swr1p [Saccharomyces cerevisiae EC1118] Length = 1514 Score = 99.2 bits (246), Expect = 3e-19, Method: Composition-based stats. Identities = 31/181 (17%), Positives = 75/181 (41%), Gaps = 19/181 (10%) Query: 29 TVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQK 86 + QL +K + K++ L +++++ N ++ L L++ Sbjct: 1221 SNPLHQLQTKLTIAFPDKSLLQYDCGKLQKLAILLQQLKDNGHRALIFTQMTKVLDVLEQ 1280 Query: 87 AF---------PQGRTLDKDPCTI-QEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFF 135 G T +D + + +N + +I + S G G+NL G + ++F+ Sbjct: 1281 FLNYHGYLYMRLDGATKIEDRQILTERFNTDSRITVFILSSRSGGLGINLT-GADTVIFY 1339 Query: 136 SLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 W+ +Q +R + G R V +Y ++++TI+ +L++ K + ++++ Sbjct: 1340 DSDWNPAMDKQCQDRC-----HRIGQTRDVHIYRFVSEHTIESNILKKANQKRQLDNVVI 1394 Query: 196 N 196 Sbjct: 1395 Q 1395 >gi|198455729|ref|XP_001357539.2| GA21216 [Drosophila pseudoobscura pseudoobscura] gi|198135371|gb|EAL24661.2| GA21216 [Drosophila pseudoobscura pseudoobscura] Length = 1035 Score = 99.2 bits (246), Expect = 3e-19, Method: Composition-based stats. Identities = 42/225 (18%), Positives = 89/225 (39%), Gaps = 37/225 (16%) Query: 6 KFQRELYCDLQGENIEAFNSASKTVK------CLQL---ANGAVYYD--------EEKHW 48 K QR+ Y + ++I+ N A K K +QL N +D Sbjct: 375 KMQRDWYTKVLLKDIDIVNGAGKVEKMRLQNILMQLRKCTNHPYLFDGAEPGPPYTTDTH 434 Query: 49 KEVHDEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQ---------KAFPQGRTLDKD 97 + K+ L+ ++ K + +++ L L+ G+T +D Sbjct: 435 LVYNSGKMAILDKLLPKLQEQGSRVLIFSQMTRMLDILEDYCHWKNYNYCRLDGQTPHED 494 Query: 98 P-CTIQEWN--EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 IQE+N + + G G+NL ++++ + W+ + Q ++R Sbjct: 495 RNRQIQEYNMENSTKFVFMLSTRAGGLGINL-ATADVVIIYDSDWNPQMDLQAMDR---- 549 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 + G K+ V V+ LI ++T++E +++R K + +++ + Sbjct: 550 -AHRIGQKKQVRVFRLITESTVEEKIVERAEVKLRLDKMVIQGGR 593 >gi|195346399|ref|XP_002039753.1| GM15831 [Drosophila sechellia] gi|194135102|gb|EDW56618.1| GM15831 [Drosophila sechellia] Length = 2550 Score = 99.2 bits (246), Expect = 3e-19, Method: Composition-based stats. Identities = 29/156 (18%), Positives = 63/156 (40%), Gaps = 19/156 (12%) Query: 55 KIKALEVIIEKA--NAAPIIVAYHFNSDLARLQ---------KAFPQGRTLDKDPCTI-Q 102 K++ ++ ++ + N +++ L L+ G T + + + Sbjct: 1666 KLQTMDRLLRQLKVNGHRVLIFTQMTKMLDVLEAFLNYHGHIYLRLDGSTRVEQRQILME 1725 Query: 103 EWNEGK-IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGF 161 +N K I S G G+NL G + ++F+ W+ Q +R + G Sbjct: 1726 RFNGDKRIFCFILSTRSGGVGINLT-GADTVIFYDSDWNPTMDAQAQDRC-----HRIGQ 1779 Query: 162 KRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 R V +Y L+++ TI+ +L++ K + D+ + Sbjct: 1780 TRDVHIYRLVSERTIEVNILKKANQKRMLSDMAIEG 1815 >gi|195148944|ref|XP_002015422.1| GL11075 [Drosophila persimilis] gi|194109269|gb|EDW31312.1| GL11075 [Drosophila persimilis] Length = 1033 Score = 99.2 bits (246), Expect = 3e-19, Method: Composition-based stats. Identities = 42/225 (18%), Positives = 89/225 (39%), Gaps = 37/225 (16%) Query: 6 KFQRELYCDLQGENIEAFNSASKTVK------CLQL---ANGAVYYD--------EEKHW 48 K QR+ Y + ++I+ N A K K +QL N +D Sbjct: 375 KMQRDWYTKVLLKDIDIVNGAGKVEKMRLQNILMQLRKCTNHPYLFDGAEPGPPYTTDTH 434 Query: 49 KEVHDEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQ---------KAFPQGRTLDKD 97 + K+ L+ ++ K + +++ L L+ G+T +D Sbjct: 435 LVYNSGKMAILDKLLPKLQEQGSRVLIFSQMTRMLDILEDYCHWKNYNYCRLDGQTPHED 494 Query: 98 P-CTIQEWN--EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 IQE+N + + G G+NL ++++ + W+ + Q ++R Sbjct: 495 RNRQIQEYNMENSTKFVFMLSTRAGGLGINL-ATADVVIIYDSDWNPQMDLQAMDR---- 549 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 + G K+ V V+ LI ++T++E +++R K + +++ + Sbjct: 550 -AHRIGQKKQVRVFRLITESTVEEKIVERAEVKLRLDKMVIQGGR 593 >gi|302810562|ref|XP_002986972.1| hypothetical protein SELMODRAFT_40849 [Selaginella moellendorffii] gi|300145377|gb|EFJ12054.1| hypothetical protein SELMODRAFT_40849 [Selaginella moellendorffii] Length = 849 Score = 99.2 bits (246), Expect = 3e-19, Method: Composition-based stats. Identities = 35/155 (22%), Positives = 58/155 (37%), Gaps = 23/155 (14%) Query: 52 HDEKIKALEVIIEKANAA----PIIVAYHFNSDLARLQKAFPQGRTL----------DKD 97 KI AL I++K A +V F+S L + Q K Sbjct: 675 SSAKITALLSILDKTRAKDPSIKTVVFSQFSSMLKLAEAPLTQAGYKFVKLQGGMSAKKR 734 Query: 98 PCTIQEWNEGKIP---LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 ++ + + + G GLNL N +V WW+ +Q ++R+ Sbjct: 735 DEAMEAFKSTSKDSPTVFLLSLKAAGVGLNLVSASN-VVMLDPWWNPAAEEQAMDRV--- 790 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKST 189 + G R V V+ L+A ++I+E +LQ K Sbjct: 791 --HRLGQTRDVHVFRLVATDSIEERLLQMQEKKRA 823 >gi|320581104|gb|EFW95326.1| transcriptional accessory protein [Pichia angusta DL-1] Length = 1878 Score = 99.2 bits (246), Expect = 3e-19, Method: Composition-based stats. Identities = 31/142 (21%), Positives = 56/142 (39%), Gaps = 20/142 (14%) Query: 69 APIIVAYHFNSDLA-----RLQKAFP-------QGRTLDKDPCTI--QEWNEGKIPLLFA 114 ++ L L+K P G T + + + N+ I +L Sbjct: 1655 HRALIFCQMKDMLDMVENDLLKKHMPGVTYLRLDGSTEPRKRQDVVRKFNNDPSIDVLLL 1714 Query: 115 HPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQN 174 G GLNL G + ++F W+ Q ++R + G K+ V VY LI ++ Sbjct: 1715 TTKVGGLGLNLT-GADTVIFVEHDWNPMNDLQAMDR-----AHRLGQKKVVNVYRLITKD 1768 Query: 175 TIDELVLQRLRTKSTIQDLLLN 196 T++E ++ + K I ++N Sbjct: 1769 TLEEKIMGLQKFKMNIASTIIN 1790 >gi|302817780|ref|XP_002990565.1| hypothetical protein SELMODRAFT_185367 [Selaginella moellendorffii] gi|300141733|gb|EFJ08442.1| hypothetical protein SELMODRAFT_185367 [Selaginella moellendorffii] Length = 1296 Score = 99.2 bits (246), Expect = 3e-19, Method: Composition-based stats. Identities = 32/175 (18%), Positives = 69/175 (39%), Gaps = 21/175 (12%) Query: 43 DEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQ----------KAFPQ 90 +E +H E K+ L+ ++ K A+ +++ F L L+ + Sbjct: 584 EENRHRIE-SSGKLSLLDKMMVKLKASGHRVLLYSQFQHMLDILEDYLTHKNWSYERIDG 642 Query: 91 GRTLDKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMI 148 T + I +N + G G+NL + +V + W+ Q + Sbjct: 643 NVTGAERQIRIDRFNAPNSNRFCFLLSTRAGGLGINL-ATADTVVIYDSDWNPHADLQAM 701 Query: 149 ERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETI 203 R + G K V +Y L+ + +I+E ++Q + K ++ L++ +K + + Sbjct: 702 AR-----AHRLGQKNMVMIYRLVTRGSIEERMMQMTKKKMVLEHLVVGRMKTQVL 751 >gi|194754060|ref|XP_001959323.1| GF12812 [Drosophila ananassae] gi|190620621|gb|EDV36145.1| GF12812 [Drosophila ananassae] Length = 3199 Score = 99.2 bits (246), Expect = 3e-19, Method: Composition-based stats. Identities = 30/156 (19%), Positives = 64/156 (41%), Gaps = 19/156 (12%) Query: 55 KIKALEVIIEK--ANAAPIIVAYHFNSDLARLQ---------KAFPQGRTLDKDPCT-IQ 102 K++ L+ ++ + A+ +++ L L+ G T + ++ Sbjct: 1662 KLQTLDRLLRQLKADGHRVLIFTQMTKMLDVLEAFLNYHGHIYLRLDGSTRVEQRQMHME 1721 Query: 103 EWNEGK-IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGF 161 +N K I S G G+NL G + ++F+ W+ Q +R + G Sbjct: 1722 RFNGDKRIFCFILSTRSGGVGINL-MGADTVIFYDSDWNPTMDAQAQDRC-----HRIGQ 1775 Query: 162 KRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 R V +Y L+++ TI+ +L++ K + D+ + Sbjct: 1776 TRDVHIYRLVSEKTIEVNILKKANQKRMLSDMAIEG 1811 >gi|50293969|ref|XP_449396.1| hypothetical protein [Candida glabrata CBS 138] gi|74690652|sp|Q6FK48|SWR1_CANGA RecName: Full=Helicase SWR1 gi|49528710|emb|CAG62372.1| unnamed protein product [Candida glabrata] Length = 1450 Score = 99.2 bits (246), Expect = 3e-19, Method: Composition-based stats. Identities = 30/166 (18%), Positives = 71/166 (42%), Gaps = 19/166 (11%) Query: 44 EEKHWKEVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQKAF---------PQGR 92 +K + K++ L +++++ ++ L L++ G Sbjct: 1168 PDKSLLQYDCGKLQKLAILLQQLKDGGHRALIFTQMTKVLDILEQFLNYHGYLYMRLDGA 1227 Query: 93 TLDKDPCTI-QEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 T +D + + +N + KI + S G G+NL G + ++F+ W+ +Q +R Sbjct: 1228 TKIEDRQILTERFNSDPKITVFILSSRSGGLGINLT-GADTVIFYDSDWNPAMDKQCQDR 1286 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + G R V +Y ++++TI+ +L++ K + D+++ Sbjct: 1287 C-----HRIGQTRDVHIYRFVSEHTIESNILKKANQKRQLDDVIIQ 1327 >gi|6599160|emb|CAB63724.1| hypothetical protein [Homo sapiens] Length = 580 Score = 99.2 bits (246), Expect = 3e-19, Method: Composition-based stats. Identities = 30/166 (18%), Positives = 64/166 (38%), Gaps = 22/166 (13%) Query: 50 EVHDEKIKALEVIIEKANA----APIIVAYHFNSDLARLQK----------AFPQGRTLD 95 E K++ L ++ + +++ ++ L LQ+ + Sbjct: 308 EKESGKLQVLSKLLAVIHELRPTEKVVLVSNYTQTLNILQEVCKRHGYAYTRLDGQTPIS 367 Query: 96 KDPCTIQEWNE--GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGV 153 + + +N + + G GLNL GG+ L+ + + W+ Q + R+ Sbjct: 368 QRQQIVDGFNSQHSSFFIFLLSSKAGGVGLNL-IGGSHLILYDIDWNPATDIQAMSRVW- 425 Query: 154 TRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 + G K V +Y L+ TI+E + QR +K + +++ K Sbjct: 426 ----RDGQKYPVHIYRLLTTGTIEEKIYQRQISKQGLCGAVVDLTK 467 >gi|225468600|ref|XP_002264131.1| PREDICTED: hypothetical protein [Vitis vinifera] Length = 1147 Score = 99.2 bits (246), Expect = 3e-19, Method: Composition-based stats. Identities = 27/134 (20%), Positives = 53/134 (39%), Gaps = 17/134 (12%) Query: 68 AAPIIVAYHFNSDLARLQKAFP----QGRTLDKD------PCTIQEWNE-GKIPLLFAHP 116 IV + L L+ Q R LD ++++N ++ ++ Sbjct: 992 GEKAIVFSQWTRMLDLLESCLKNSSIQYRRLDGTMSVVARDKAVKDFNTLPEVSVMIMSL 1051 Query: 117 ASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTI 176 + GLN+ ++L+ LWW+ Q I+R + G R V V L ++T+ Sbjct: 1052 KAASLGLNMVAACHVLLL-DLWWNPTTEDQAIDR-----AHRIGQTRPVTVLRLTVKDTV 1105 Query: 177 DELVLQRLRTKSTI 190 ++ +L + K + Sbjct: 1106 EDRILALQQKKREM 1119 >gi|225468256|ref|XP_002267495.1| PREDICTED: hypothetical protein isoform 3 [Vitis vinifera] Length = 835 Score = 99.2 bits (246), Expect = 3e-19, Method: Composition-based stats. Identities = 27/134 (20%), Positives = 53/134 (39%), Gaps = 17/134 (12%) Query: 68 AAPIIVAYHFNSDLARLQKAFP----QGRTLDKD------PCTIQEWNE-GKIPLLFAHP 116 IV + L L+ Q R LD ++++N ++ ++ Sbjct: 680 GEKAIVFSQWTRMLDLLESCLKNSSIQYRRLDGTMSVVARDKAVKDFNTLPEVSVMIMSL 739 Query: 117 ASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTI 176 + GLN+ ++L+ LWW+ Q I+R + G R V V L ++T+ Sbjct: 740 KAASLGLNMVAACHVLLL-DLWWNPTTEDQAIDR-----AHRIGQTRPVTVLRLTVKDTV 793 Query: 177 DELVLQRLRTKSTI 190 ++ +L + K + Sbjct: 794 EDRILALQQKKREM 807 >gi|225468252|ref|XP_002267335.1| PREDICTED: hypothetical protein isoform 1 [Vitis vinifera] Length = 867 Score = 99.2 bits (246), Expect = 3e-19, Method: Composition-based stats. Identities = 27/134 (20%), Positives = 53/134 (39%), Gaps = 17/134 (12%) Query: 68 AAPIIVAYHFNSDLARLQKAFP----QGRTLDKD------PCTIQEWNE-GKIPLLFAHP 116 IV + L L+ Q R LD ++++N ++ ++ Sbjct: 712 GEKAIVFSQWTRMLDLLESCLKNSSIQYRRLDGTMSVVARDKAVKDFNTLPEVSVMIMSL 771 Query: 117 ASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTI 176 + GLN+ ++L+ LWW+ Q I+R + G R V V L ++T+ Sbjct: 772 KAASLGLNMVAACHVLLL-DLWWNPTTEDQAIDR-----AHRIGQTRPVTVLRLTVKDTV 825 Query: 177 DELVLQRLRTKSTI 190 ++ +L + K + Sbjct: 826 EDRILALQQKKREM 839 >gi|225467009|ref|XP_002262712.1| PREDICTED: hypothetical protein, partial [Vitis vinifera] Length = 781 Score = 99.2 bits (246), Expect = 3e-19, Method: Composition-based stats. Identities = 27/134 (20%), Positives = 53/134 (39%), Gaps = 17/134 (12%) Query: 68 AAPIIVAYHFNSDLARLQKAFP----QGRTLDKD------PCTIQEWNE-GKIPLLFAHP 116 IV + L L+ Q R LD ++++N ++ ++ Sbjct: 626 GEKAIVFSQWTRMLDLLESCLKNSSIQYRRLDGTMSVVARDKAVKDFNTLPEVSVMIMSL 685 Query: 117 ASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTI 176 + GLN+ ++L+ LWW+ Q I+R + G R V V L ++T+ Sbjct: 686 KAASLGLNMVAACHVLLL-DLWWNPTTEDQAIDR-----AHRIGQTRPVTVLRLTVKDTV 739 Query: 177 DELVLQRLRTKSTI 190 ++ +L + K + Sbjct: 740 EDRILALQQKKREM 753 >gi|147852279|emb|CAN82215.1| hypothetical protein VITISV_020421 [Vitis vinifera] Length = 1435 Score = 99.2 bits (246), Expect = 3e-19, Method: Composition-based stats. Identities = 27/134 (20%), Positives = 53/134 (39%), Gaps = 17/134 (12%) Query: 68 AAPIIVAYHFNSDLARLQKAFP----QGRTLDKD------PCTIQEWNE-GKIPLLFAHP 116 IV + L L+ Q R LD ++++N ++ ++ Sbjct: 1253 GEKAIVFSQWTRMLDLLESCLKNSSIQYRRLDGTMSVVARDKAVKDFNTLPEVSVMIMSL 1312 Query: 117 ASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTI 176 + GLN+ ++L+ LWW+ Q I+R + G R V V L ++T+ Sbjct: 1313 KAASLGLNMVAACHVLLL-DLWWNPTTEDQAIDR-----AHRIGQTRPVTVLRLTVKDTV 1366 Query: 177 DELVLQRLRTKSTI 190 ++ +L + K + Sbjct: 1367 EDRILALQQKKREM 1380 >gi|302803789|ref|XP_002983647.1| hypothetical protein SELMODRAFT_155996 [Selaginella moellendorffii] gi|300148484|gb|EFJ15143.1| hypothetical protein SELMODRAFT_155996 [Selaginella moellendorffii] Length = 1296 Score = 99.2 bits (246), Expect = 3e-19, Method: Composition-based stats. Identities = 32/175 (18%), Positives = 69/175 (39%), Gaps = 21/175 (12%) Query: 43 DEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQ----------KAFPQ 90 +E +H E K+ L+ ++ K A+ +++ F L L+ + Sbjct: 584 EENRHRIE-SSGKLSLLDKMMVKLKASGHRVLLYSQFQHMLDILEDYLTHKNWSYERIDG 642 Query: 91 GRTLDKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMI 148 T + I +N + G G+NL + +V + W+ Q + Sbjct: 643 NVTGAERQIRIDRFNAPNSNRFCFLLSTRAGGLGINL-ATADTVVIYDSDWNPHADLQAM 701 Query: 149 ERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETI 203 R + G K V +Y L+ + +I+E ++Q + K ++ L++ +K + + Sbjct: 702 AR-----AHRLGQKNMVMIYRLVTRGSIEERMMQMTKKKMVLEHLVVGRMKTQVL 751 >gi|302664731|ref|XP_003023992.1| hypothetical protein TRV_01854 [Trichophyton verrucosum HKI 0517] gi|291188017|gb|EFE43374.1| hypothetical protein TRV_01854 [Trichophyton verrucosum HKI 0517] Length = 1692 Score = 99.2 bits (246), Expect = 3e-19, Method: Composition-based stats. Identities = 30/166 (18%), Positives = 68/166 (40%), Gaps = 19/166 (11%) Query: 44 EEKHWKEVHDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAF---------PQGR 92 +K + K++ L+ ++ +A ++ L L++ G Sbjct: 1342 PDKRLLQYDCGKLQQLDKLLRKLQAGGHRALIFTQMTKMLDILEQFLNIHGHRYLRLDGS 1401 Query: 93 TLDKDPCTI--QEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 T + + + N+ +I S G G+NL G + ++F+ L W+ +Q +R Sbjct: 1402 TKIEQRQLLTERFNNDTRILAFILSSRSGGLGINLT-GADTVIFYDLDWNPAMDKQCQDR 1460 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + G R V +Y +++ TI+ +L++ K + D+++ Sbjct: 1461 C-----HRIGQTRDVHIYRFVSEYTIESNILRKANQKRMLDDVVIQ 1501 >gi|301114327|ref|XP_002998933.1| DNA excision repair protein ERCC-6 [Phytophthora infestans T30-4] gi|262111027|gb|EEY69079.1| DNA excision repair protein ERCC-6 [Phytophthora infestans T30-4] Length = 1052 Score = 99.2 bits (246), Expect = 3e-19, Method: Composition-based stats. Identities = 43/188 (22%), Positives = 72/188 (38%), Gaps = 20/188 (10%) Query: 16 QGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAY 75 +GE+ E F +AS + K + L + E+KH V + L I+E Sbjct: 593 EGESDEPFGAASASGKMIVLQKVLTLWKEQKHRVLVFTQTRSML-DILES---------- 641 Query: 76 HFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLL--FAHPASCGHGLNLQYGGNILV 133 F S L + + + +N L + G G+NL G + +V Sbjct: 642 -FMSRLGHACTRLDGTTGVAERQQRLDAFNAPDSNLFAFLLTTRAGGIGVNL-VGADRVV 699 Query: 134 FFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDL 193 F W+ Q ER + G ++ V VY L+ TI+E + R K + Sbjct: 700 VFDPDWNPSTDVQARERAW-----RIGQQKPVTVYRLVTAGTIEEKIYHRQIFKQYLTSK 754 Query: 194 LLNALKKE 201 +L+ K++ Sbjct: 755 VLHDAKRK 762 >gi|225678415|gb|EEH16699.1| lymphoid specific helicase variant3 [Paracoccidioides brasiliensis Pb03] Length = 892 Score = 99.2 bits (246), Expect = 3e-19, Method: Composition-based stats. Identities = 25/146 (17%), Positives = 55/146 (37%), Gaps = 18/146 (12%) Query: 66 ANAAPIIVAYHFNSDLARLQK-----------AFPQGRTLDKDPCTIQEWN-EGKIPLLF 113 + I++ F + L LQ + I +N + + Sbjct: 657 SKNHKILIFSQFKTQLDILQDYAVYLRGWNCCRIDGAVSQADRQAQIAAFNTDPNYRIFL 716 Query: 114 AHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQ 173 + G G+NL + ++ F W+ ++ Q R + G + V VY L + Sbjct: 717 LSTRAGGQGINLT-AADTVILFDSDWNPQQDLQA-----QDRAHRIGQTKPVIVYRLATR 770 Query: 174 NTIDELVLQRLRTKSTIQDLLLNALK 199 T+++ +L++ +K ++ L++ K Sbjct: 771 GTVEQTLLEKADSKRKLEKLVIQKGK 796 >gi|195146980|ref|XP_002014461.1| GL19201 [Drosophila persimilis] gi|198473550|ref|XP_001356340.2| GA19213 [Drosophila pseudoobscura pseudoobscura] gi|194106414|gb|EDW28457.1| GL19201 [Drosophila persimilis] gi|198138009|gb|EAL33403.2| GA19213 [Drosophila pseudoobscura pseudoobscura] Length = 833 Score = 99.2 bits (246), Expect = 3e-19, Method: Composition-based stats. Identities = 29/164 (17%), Positives = 65/164 (39%), Gaps = 19/164 (11%) Query: 52 HDEKIKALEVIIEKA--NAAPIIVAYHFNSDLA------RLQKA----FPQGRTLDKDPC 99 K + L+ ++ K +++ F L R++K + + Sbjct: 637 DSGKFEFLDTLLPKLKEEGHRVLLFSQFTMMLDIVEEYMRIRKHGFCRLDGATAVKERQD 696 Query: 100 TIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQ 158 I ++N + I + + G G+NL ++ + ++ +Q +R + Sbjct: 697 LITDFNVDDNIFVFLLSTKAGGVGINLTAADTCIIH-DIDFNPYNDKQAEDRC-----HR 750 Query: 159 AGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKET 202 G +R V +Y L+A++TI+E +L K ++ + + K E Sbjct: 751 MGQQRPVTIYRLVAESTIEEGILMAAEEKLKLEKEITSTEKGEG 794 >gi|167375276|ref|XP_001739827.1| transcription regulatory protein SNF2 [Entamoeba dispar SAW760] gi|165896374|gb|EDR23803.1| transcription regulatory protein SNF2, putative [Entamoeba dispar SAW760] Length = 756 Score = 99.2 bits (246), Expect = 3e-19, Method: Composition-based stats. Identities = 31/187 (16%), Positives = 64/187 (34%), Gaps = 23/187 (12%) Query: 26 ASKTVKCLQLANGAVYY----DEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNS 79 + ++ N D K+K + ++++ ++ Sbjct: 393 LAAIDTLRKICNHPHLINKTEDLTPETIYKESSKLKYVCDLLKQFQKEGHKALIFCQTRQ 452 Query: 80 DLARLQKAFPQGRTL----------DKDPCTIQEWNE-GKIPLLFAHPASCGHGLNLQYG 128 L +++ + +K P I ++N + + G G+NL G Sbjct: 453 MLNIIEQMMLNEKFKYLRMDGLVSSNKRPEYISQFNNDPTVLVFILTTRVGGLGINLT-G 511 Query: 129 GNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKS 188 + ++ + W+ Q ER + G R V +Y LI TI+E + Q+ K Sbjct: 512 ADRVIMYDPDWNPTVDSQAKERTL-----RIGQDRDVIIYRLICSGTIEEHIYQKQMAKE 566 Query: 189 TIQDLLL 195 + D +L Sbjct: 567 ILSDKIL 573 >gi|119487132|ref|XP_001262421.1| DNA repair protein Rhp26/Rad26, putative [Neosartorya fischeri NRRL 181] gi|119410578|gb|EAW20524.1| DNA repair protein Rhp26/Rad26, putative [Neosartorya fischeri NRRL 181] Length = 1214 Score = 99.2 bits (246), Expect = 3e-19, Method: Composition-based stats. Identities = 31/163 (19%), Positives = 59/163 (36%), Gaps = 20/163 (12%) Query: 53 DEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQK-----------AFPQGRTLDKDPC 99 K++ ++ ++E + ++ L L+K + Sbjct: 759 SGKMQVVKSLLELWRDTGHKTLLFAQHRIMLDILEKFVRSLSGFNHRRMDGTTPIQNRQT 818 Query: 100 TIQEWNE-GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQ 158 + E+N I + G G+NL G + ++ + W+ Q ER + Sbjct: 819 MVDEFNNDPNIHVFLLTTKVGGLGVNLT-GADRVIIYDPDWNPSTDVQARERAW-----R 872 Query: 159 AGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 G KR V VY L+ TI+E + R K + + +L K+ Sbjct: 873 LGQKRDVSVYRLMTAGTIEEKIYHRQIFKQFLTNKILRDPKQR 915 >gi|255725912|ref|XP_002547882.1| hypothetical protein CTRG_02179 [Candida tropicalis MYA-3404] gi|240133806|gb|EER33361.1| hypothetical protein CTRG_02179 [Candida tropicalis MYA-3404] Length = 818 Score = 99.2 bits (246), Expect = 3e-19, Method: Composition-based stats. Identities = 29/167 (17%), Positives = 69/167 (41%), Gaps = 19/167 (11%) Query: 42 YDEEKHWKEVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQKAFPQGRTL----- 94 D+ + + K + L+ ++ K N +++ F + L+ F Sbjct: 575 TDKFMEVLKKNSCKFQMLDQLLSKLLPNGHKLLIFCQFTKVMELLESYFDYFEIKTCYLD 634 Query: 95 -----DKDPCTIQEWNE-GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMI 148 D I ++N + + + G GLNL + ++ + W+ + Q I Sbjct: 635 GTVSHDIRQEQIDDFNNDPESKIFLLSTRAGGLGLNLT-AADTVILWDSDWNPQVDLQAI 693 Query: 149 ERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 +R+ + G + V +Y + +++I+E++L R +K ++ L++ Sbjct: 694 DRV-----HRIGQTKPVKIYRFMVKDSIEEILLSRSGSKRMLEKLVM 735 >gi|255075383|ref|XP_002501366.1| SNF2 super family [Micromonas sp. RCC299] gi|226516630|gb|ACO62624.1| SNF2 super family [Micromonas sp. RCC299] Length = 961 Score = 99.2 bits (246), Expect = 3e-19, Method: Composition-based stats. Identities = 36/158 (22%), Positives = 59/158 (37%), Gaps = 19/158 (12%) Query: 53 DEKIKALEVIIEKANAA--PIIVAYHFNSDLA----RLQK-AFPQGRTLDKDPCTIQEWN 105 D +K L + N IV + S + RL+K F + L P T + N Sbjct: 791 DALLKGLNDMRSGKNGHLNKAIVFSQYTSMIEIVDWRLKKDRFTVAKLLGSMPITQRAAN 850 Query: 106 ------EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQA 159 + + ++ S G GLNLQ N + WW+ Q I R + Sbjct: 851 LKAFREDPNVSVILMSLKSGGEGLNLQ-AANYVFVLEPWWNPAVEMQAI-----MRAHRI 904 Query: 160 GFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 G R V ++TI+E ++Q K + + ++ Sbjct: 905 GQTRGVTAVRFSTKDTIEERMMQLQEKKKLVFEGCMDG 942 >gi|14028669|gb|AAK52454.1|AF325921_1 DNA-dependent ATPase SNF2H [Mus musculus] Length = 1051 Score = 99.2 bits (246), Expect = 3e-19, Method: Composition-based stats. Identities = 42/230 (18%), Positives = 85/230 (36%), Gaps = 40/230 (17%) Query: 1 MKQY---HKFQRELYCDLQGENIEAFNSASKTVK------CLQL--ANGAVYYDEEKHW- 48 +K Y K QRE Y + ++I+ NSA K K +QL Y + Sbjct: 409 VKIYVGLSKMQREWYTRILMKDIDILNSAGKMDKMRLLNILMQLRKCCNHPYLFDGAEPG 468 Query: 49 --------KEVHDEKIKALEVIIEKANAA--PIIVAYHFNSDLARLQ---------KAFP 89 + K+ L+ ++ K +++ L L+ Sbjct: 469 PPYTTDMHLVTNSGKMVVLDKLLPKLKEQSSRVLIFSQMTRVLDILEDYCMWRNYEYCRL 528 Query: 90 QGRTLDKDPCT-IQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 G+T + I +NE + + G G+NL ++++ + W+ + Q Sbjct: 529 DGQTPHDERQDSINAYNEPNSTKFVFMLSTRAGGLGINL-ATADVVILYDSDWNPQVDLQ 587 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 ++R + G + V V+ I NT++E +++R K + +++ Sbjct: 588 AMDR-----AHRIGQTKTVRVFRFITDNTVEERIVERAEMKLRLDSIVIQ 632 >gi|320034068|gb|EFW16014.1| DNA repair and recombination protein RAD26 [Coccidioides posadasii str. Silveira] Length = 1198 Score = 99.2 bits (246), Expect = 3e-19, Method: Composition-based stats. Identities = 30/163 (18%), Positives = 59/163 (36%), Gaps = 20/163 (12%) Query: 53 DEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQK-----------AFPQGRTLDKDPC 99 K++ ++ ++E + ++ L L+K + Sbjct: 737 SGKMQVVKALLELWRDTGHKTLLFAQHRIMLDILEKFIKSLTGFNYRRMDGNTPIKVRQG 796 Query: 100 TIQEWNE-GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQ 158 + E+N I + G G+NL G + ++ + W+ Q ER + Sbjct: 797 MVDEFNNDPDIHVFLLTTKVGGLGVNLT-GADRVIIYDPDWNPSTDLQARERAW-----R 850 Query: 159 AGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 G KR V +Y L+ TI+E + R K + + +L K+ Sbjct: 851 LGQKREVTIYRLMTAGTIEEKIYHRQIFKQFLTNKILKDPKQR 893 >gi|299756460|ref|XP_001829349.2| DNA repair protein RAD5 [Coprinopsis cinerea okayama7#130] gi|298411686|gb|EAU92309.2| DNA repair protein RAD5 [Coprinopsis cinerea okayama7#130] Length = 1155 Score = 99.2 bits (246), Expect = 3e-19, Method: Composition-based stats. Identities = 34/164 (20%), Positives = 60/164 (36%), Gaps = 22/164 (13%) Query: 52 HDEKIKALEVIIEKANAA----PIIVAYHFNSDLARLQ----------KAFPQGRTLDKD 97 K+ AL + + +V F S L +Q F + K Sbjct: 977 SSTKLDALVQNLRRLRDQDPCFRAVVFSQFTSFLDLIQVVLTRERFEHYRFDGTMDVKKR 1036 Query: 98 PCTIQEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTR 155 I ++ K +L + G GLNL N + WW+ Q I+R+ Sbjct: 1037 GAAISDFKAPSRKPKILVVSLKAGGVGLNLT-AANHVFMMDCWWNAATENQAIDRV---- 1091 Query: 156 QRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 + G ++ V+V + + NTI+ +LQ + K+ I + + Sbjct: 1092 -HRIGQEKTVYVKHFVISNTIEGRILQIQKRKTAIVNEAFKGTQ 1134 >gi|24656962|ref|NP_726065.1| domino, isoform D [Drosophila melanogaster] gi|21645213|gb|AAM70870.1| domino, isoform D [Drosophila melanogaster] Length = 3183 Score = 99.2 bits (246), Expect = 3e-19, Method: Composition-based stats. Identities = 29/156 (18%), Positives = 63/156 (40%), Gaps = 19/156 (12%) Query: 55 KIKALEVIIEKA--NAAPIIVAYHFNSDLARLQ---------KAFPQGRTLDKDPCTI-Q 102 K++ ++ ++ + N +++ L L+ G T + + + Sbjct: 1659 KLQTMDRLLRQLKVNGHRVLIFTQMTKMLDVLEAFLNYHGHIYLRLDGSTRVEQRQILME 1718 Query: 103 EWNEGK-IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGF 161 +N K I S G G+NL G + ++F+ W+ Q +R + G Sbjct: 1719 RFNGDKRIFCFILSTRSGGVGINLT-GADTVIFYDSDWNPTMDAQAQDRC-----HRIGQ 1772 Query: 162 KRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 R V +Y L+++ TI+ +L++ K + D+ + Sbjct: 1773 TRDVHIYRLVSERTIEVNILKKANQKRMLSDMAIEG 1808 >gi|67904180|ref|XP_682346.1| hypothetical protein AN9077.2 [Aspergillus nidulans FGSC A4] gi|74680483|sp|Q5ARK3|SWR1_EMENI RecName: Full=Helicase swr1 gi|40742720|gb|EAA61910.1| hypothetical protein AN9077.2 [Aspergillus nidulans FGSC A4] Length = 1656 Score = 99.2 bits (246), Expect = 3e-19, Method: Composition-based stats. Identities = 30/166 (18%), Positives = 67/166 (40%), Gaps = 19/166 (11%) Query: 44 EEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAF---------PQGR 92 +K + K++ L+ ++ A ++ L L++ G Sbjct: 1321 PDKRLLQYDCGKLQRLDKLLRDLKAGGHRALIFTQMTKMLDVLEQFLNIHGHRYLRLDGT 1380 Query: 93 TLDKDPCTI--QEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 T + + + N+ +I S G G+NL G + ++F+ L W+ +Q +R Sbjct: 1381 TKVEQRQILTDRFNNDNRILAFILSSRSGGLGINLT-GADTVIFYDLDWNPAMDKQCQDR 1439 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + G R V +Y +++ TI+ +L++ K + D+++ Sbjct: 1440 C-----HRIGQTRDVHIYRFVSEYTIESNILRKANQKRMLDDVVIQ 1480 >gi|229914880|gb|ACQ90605.1| SWI/SNF helicase-like protein [Eutrema halophilum] Length = 768 Score = 99.2 bits (246), Expect = 3e-19, Method: Composition-based stats. Identities = 29/162 (17%), Positives = 64/162 (39%), Gaps = 19/162 (11%) Query: 49 KEVHDEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQ---------KAFPQGRTLDKD 97 + K + L ++ +++ + S L L+ G T D Sbjct: 588 HVMLSAKCRTLAELLPSMKQSGHRVLIFSQWTSMLDILEWTLDVIGVTYRRLDGSTQVTD 647 Query: 98 PCTIQE-WNEGK-IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTR 155 TI + +N K I + G GLNL G + ++ + ++ + +Q +R Sbjct: 648 RQTIVDTFNNDKSIFACLLSTRAGGQGLNLT-GADTVIIHDMDFNPQIDRQAEDRC---- 702 Query: 156 QRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + G + V ++ L+ ++T+DE + + + K + +L + Sbjct: 703 -HRIGQTKPVTIFRLVTKSTVDENIYEIAKRKLVLDAAVLES 743 >gi|294658278|ref|XP_460608.2| DEHA2F05676p [Debaryomyces hansenii CBS767] gi|202953010|emb|CAG88933.2| DEHA2F05676p [Debaryomyces hansenii] Length = 1161 Score = 99.2 bits (246), Expect = 3e-19, Method: Composition-based stats. Identities = 29/198 (14%), Positives = 75/198 (37%), Gaps = 20/198 (10%) Query: 9 RELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANA 68 R+ + N + + K QL + ++ ++ + ++ ++E Sbjct: 949 RDKIAEFYNINYSSNGKTTNMQKIRQL----IQENKGFTPSAKMEKCMHLIKDVLENYPD 1004 Query: 69 APIIVAYHFNSDLARLQKAFPQGRT----------LDKDPCTIQEWNEGKIPLLFAHPAS 118 II+ F S ++ + LD+ TI+++ +G +L + Sbjct: 1005 EKIIIFSQFLSLFDLMKLVLANEKIPFLRYDGSMSLDEKNSTIKQFYQGSTKVLLISLRA 1064 Query: 119 CGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDE 178 GL L ++++ +W+ +Q ++R + G +R V V+ ++ + +++ Sbjct: 1065 GNVGLTLTCASHVIIM-DPFWNPYVEEQAMDR-----AHRIGQQRDVRVHRILTEGSVEG 1118 Query: 179 LVLQRLRTKSTIQDLLLN 196 ++ K I L+ Sbjct: 1119 RIMTLQNEKKEIISGALD 1136 >gi|326912967|ref|XP_003202815.1| PREDICTED: transcription termination factor 2-like [Meleagris gallopavo] Length = 1176 Score = 99.2 bits (246), Expect = 3e-19, Method: Composition-based stats. Identities = 35/162 (21%), Positives = 64/162 (39%), Gaps = 19/162 (11%) Query: 53 DEKIKALEVIIEKANAAPIIVAYHFNSDLA---------RLQKAFPQGRTLDKDPCTI-- 101 + L+ I + +V + S L L+ + G K + Sbjct: 1008 SHLLAELKTIQSHPESQKSVVVSQWTSMLKVVAVHLQRLGLKYSVVDGSVNPKQRMDVVE 1067 Query: 102 QEWNEGKIP-LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 + N K P ++ + G GLNL GGN L + W+ +Q +RI + G Sbjct: 1068 EFNNNPKGPQVMLVSLLAGGVGLNLT-GGNHLFLLDMHWNPALEEQACDRI-----YRVG 1121 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKET 202 ++ V ++ + + T++E ++Q K + +L A K ET Sbjct: 1122 QQKDVVIHRFVCEGTVEEKIVQLQTKKKGLAQQVL-AGKGET 1162 >gi|321469421|gb|EFX80401.1| hypothetical protein DAPPUDRAFT_318579 [Daphnia pulex] Length = 1037 Score = 99.2 bits (246), Expect = 3e-19, Method: Composition-based stats. Identities = 48/230 (20%), Positives = 89/230 (38%), Gaps = 40/230 (17%) Query: 1 MKQY---HKFQRELYCDLQGENIEAFNSASKTVK------CLQL---ANGAVYYD--EEK 46 +K Y K QRE+Y + +I+ N A K K +QL N +D E Sbjct: 366 VKVYIGLSKMQREMYTKILMRDIDIVNGAGKLEKMRLQNILMQLRKCCNHPYLFDGAEPG 425 Query: 47 HWKEVHDE------KIKALEVIIEK--ANAAPIIVAYHFNSDLARLQ---------KAFP 89 + K+ L+ ++ K A + +++ L L+ Sbjct: 426 PPYTTDEHIVYNCGKMVILDKLLPKLKAQGSRVLIFSQMTRMLDILEDYSLWRGYNYCRL 485 Query: 90 QGRTLDKDP-CTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 G T +D I+E+N L + G G+NL +++V F W+ + Q Sbjct: 486 DGSTPHEDRHRQIEEYNAPDSKKFLFMLSTRAGGLGINL-ATADVVVLFDSDWNPQMDLQ 544 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 ++R + G + V V+ I NT++E ++++ K + L++ Sbjct: 545 AMDR-----AHRIGQLKQVRVFRFITDNTVEEKIVEKAEVKLRLDKLVIQ 589 >gi|149240093|ref|XP_001525922.1| helicase SWR1 [Lodderomyces elongisporus NRRL YB-4239] gi|146450045|gb|EDK44301.1| helicase SWR1 [Lodderomyces elongisporus NRRL YB-4239] Length = 1764 Score = 99.2 bits (246), Expect = 3e-19, Method: Composition-based stats. Identities = 31/166 (18%), Positives = 71/166 (42%), Gaps = 19/166 (11%) Query: 44 EEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAF---------PQGR 92 +K + K++ L ++ AN ++ L L++ G Sbjct: 1484 PDKTLLQYDCGKLQKLATLMRDLVANGHRALIFTQMTKVLDILEQFLNIHGYRYMRLDGA 1543 Query: 93 TLDKDPCTI-QEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 T +D + +++N + KIP+ S G G+NL G + ++F+ W+ +Q +R Sbjct: 1544 TKIEDRQLLTEKFNRDPKIPVFILSTRSGGLGINLT-GADTVIFYDSDWNPAMDKQCQDR 1602 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + G R V +Y +++ TI+ ++++ K + ++++ Sbjct: 1603 C-----HRIGQVRDVHIYRFVSEYTIESNIIKKANQKRQLDNVVIQ 1643 >gi|194881876|ref|XP_001975047.1| GG22110 [Drosophila erecta] gi|190658234|gb|EDV55447.1| GG22110 [Drosophila erecta] Length = 3193 Score = 99.2 bits (246), Expect = 3e-19, Method: Composition-based stats. Identities = 29/156 (18%), Positives = 63/156 (40%), Gaps = 19/156 (12%) Query: 55 KIKALEVIIEKA--NAAPIIVAYHFNSDLARLQ---------KAFPQGRTLDKDPCTI-Q 102 K++ ++ ++ + N +++ L L+ G T + + + Sbjct: 1658 KLQTMDRLLRQLKVNGHRVLIFTQMTKMLDVLEAFLNYHGHIYLRLDGSTRVEQRQILME 1717 Query: 103 EWNEGK-IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGF 161 +N K I S G G+NL G + ++F+ W+ Q +R + G Sbjct: 1718 RFNGDKRIFCFILSTRSGGVGINLT-GADTVIFYDSDWNPTMDAQAQDRC-----HRIGQ 1771 Query: 162 KRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 R V +Y L+++ TI+ +L++ K + D+ + Sbjct: 1772 TRDVHIYRLVSERTIEVNILKKANQKRMLSDMAIEG 1807 >gi|195380477|ref|XP_002048997.1| GJ21347 [Drosophila virilis] gi|194143794|gb|EDW60190.1| GJ21347 [Drosophila virilis] Length = 1021 Score = 99.2 bits (246), Expect = 3e-19, Method: Composition-based stats. Identities = 42/225 (18%), Positives = 89/225 (39%), Gaps = 37/225 (16%) Query: 6 KFQRELYCDLQGENIEAFNSASKTVK------CLQL---ANGAVYYD--------EEKHW 48 K QR+ Y + ++I+ N A K K +QL N +D Sbjct: 366 KMQRDWYTKVLLKDIDIVNGAGKVEKMRLQNILMQLRKCTNHPYLFDGAEPGPPYTTDTH 425 Query: 49 KEVHDEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQ---------KAFPQGRTLDKD 97 + K+ L+ ++ K + +++ L L+ G+T +D Sbjct: 426 LVYNSGKMAILDKLLPKLQEQGSRVLIFSQMTRMLDILEDYCHWRNYNYCRLDGQTPHED 485 Query: 98 P-CTIQEWN--EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 IQE+N + + G G+NL ++++ + W+ + Q ++R Sbjct: 486 RNRQIQEYNMENSTKFIFMLSTRAGGLGINL-ATADVVIIYDSDWNPQMDLQAMDR---- 540 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 + G K+ V V+ LI ++T++E +++R K + +++ + Sbjct: 541 -AHRIGQKKQVRVFRLITESTVEEKIVERAEVKLRLDKMVIQGGR 584 >gi|309358145|emb|CAP34504.2| CBR-ISW-1 protein [Caenorhabditis briggsae AF16] Length = 1019 Score = 99.2 bits (246), Expect = 3e-19, Method: Composition-based stats. Identities = 42/230 (18%), Positives = 89/230 (38%), Gaps = 40/230 (17%) Query: 1 MKQY---HKFQRELYCDLQGENIEAFNSASKTVK---------CLQLANGAVYYD--EEK 46 +K Y K QRE Y + ++I+ N A K K + N +D E Sbjct: 366 VKVYVGLSKMQREWYTKILLKDIDVINGAGKVEKARLMNILMHLRKCVNHPYLFDGAEPG 425 Query: 47 HWKEVHDE------KIKALEVIIEKAN--AAPIIVAYHFNSDLARLQ---------KAFP 89 K+ L+ ++ + + +++ F+ L L+ Sbjct: 426 PPYTTDQHLVDNCGKMVVLDKLLSRLQEQGSRVLIFSQFSRMLDLLEDYCWWRKYEYCRL 485 Query: 90 QGRTLDKDPC-TIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 G T D I+ +N + + G G+NL ++++ + W+ + Q Sbjct: 486 DGSTAHVDRTSAIEAYNAPDSKKFIFMLTTRAGGLGINL-ATADVVIIYDSDWNPQSDLQ 544 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 ++R + G K+ V V+ LI +NT+D+ ++++ K + ++++ Sbjct: 545 AMDR-----AHRIGQKKQVKVFRLITENTVDDRIIEKAEAKLRLDNIVIQ 589 >gi|294878780|ref|XP_002768479.1| hypothetical protein Pmar_PMAR022081 [Perkinsus marinus ATCC 50983] gi|239870964|gb|EER01197.1| hypothetical protein Pmar_PMAR022081 [Perkinsus marinus ATCC 50983] Length = 799 Score = 99.2 bits (246), Expect = 3e-19, Method: Composition-based stats. Identities = 28/166 (16%), Positives = 68/166 (40%), Gaps = 19/166 (11%) Query: 44 EEKHWKEVHDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAF----------PQG 91 ++ E K++ L ++ + IV + L ++ + Sbjct: 543 PDRDMIERDCGKMRKLGELLTTLRDGGHKCIVFTQMSKMLDIIEASMNLHGFTYVRLDGS 602 Query: 92 RTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 + + ++ +N KI A + G G+NL G + ++F+ W+ +Q ++R Sbjct: 603 TPVLRRQLVVEAFNKSPKIFAFIASTRAGGVGINLT-GADCVIFYDSDWNPAMDRQAMDR 661 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + G R V ++ L++ +TI+E + + K + D++++ Sbjct: 662 C-----HRIGQTRDVHIFRLLSHHTIEENIFHKQLQKRMLDDVVVD 702 >gi|242017388|ref|XP_002429171.1| TATA-binding protein-associated factor, putative [Pediculus humanus corporis] gi|212514049|gb|EEB16433.1| TATA-binding protein-associated factor, putative [Pediculus humanus corporis] Length = 1746 Score = 98.9 bits (245), Expect = 3e-19, Method: Composition-based stats. Identities = 30/144 (20%), Positives = 58/144 (40%), Gaps = 20/144 (13%) Query: 67 NAAPIIVAYHFNSDLARL-----QKAFPQGRTLDKDPC--------TIQEWN-EGKIPLL 112 N ++ S L + +K P L D + ++N + I +L Sbjct: 1534 NQHRALIFCQLKSMLDIIESDLLKKHLPNVSYLRLDGSIPPSQRHSVVNKFNSDPSIDVL 1593 Query: 113 FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIA 172 G GLNL G + ++F W+ + Q ++R + G K+ V VY LI Sbjct: 1594 LLTTQVGGLGLNLT-GADTVIFVEHDWNPMKDLQAMDR-----AHRIGQKKVVNVYRLIT 1647 Query: 173 QNTIDELVLQRLRTKSTIQDLLLN 196 + T++E ++ + K + +++ Sbjct: 1648 RGTLEEKIMGLQKFKLLTANTIIS 1671 >gi|8953897|gb|AAF82185.1| helicase DOMINO A [Drosophila melanogaster] Length = 3201 Score = 98.9 bits (245), Expect = 3e-19, Method: Composition-based stats. Identities = 29/156 (18%), Positives = 63/156 (40%), Gaps = 19/156 (12%) Query: 55 KIKALEVIIEKA--NAAPIIVAYHFNSDLARLQ---------KAFPQGRTLDKDPCTI-Q 102 K++ ++ ++ + N +++ L L+ G T + + + Sbjct: 1659 KLQTMDRLLRQLKVNGHRVLIFTQMTKMLDVLEAFLNYHGHIYLRLDGSTRVEQRQILME 1718 Query: 103 EWNEGK-IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGF 161 +N K I S G G+NL G + ++F+ W+ Q +R + G Sbjct: 1719 RFNGDKRIFCFILSTRSGGVGINLT-GADTVIFYDSDWNPTMDAQAQDRC-----HRIGQ 1772 Query: 162 KRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 R V +Y L+++ TI+ +L++ K + D+ + Sbjct: 1773 TRDVHIYRLVSERTIEVNILKKANQKRMLSDMAIEG 1808 >gi|294658394|ref|XP_002770778.1| DEHA2F08470p [Debaryomyces hansenii CBS767] gi|202953094|emb|CAR66304.1| DEHA2F08470p [Debaryomyces hansenii] Length = 1923 Score = 98.9 bits (245), Expect = 3e-19, Method: Composition-based stats. Identities = 32/143 (22%), Positives = 59/143 (41%), Gaps = 20/143 (13%) Query: 68 AAPIIVAYHFNSDLARLQKAFPQ------------GRTLDKDPCTI-QEWNE-GKIPLLF 113 ++ L ++ + G T +D +I +++NE I +L Sbjct: 1703 EHRALIFCQLKDMLDIVENELLKKYLPSVTYTRLDGSTDPRDRQSIVRKFNEDPSIDVLL 1762 Query: 114 AHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQ 173 G GLNL G + ++F W+ Q ++R + G K+ V VY LI + Sbjct: 1763 LTTKVGGLGLNLT-GADTVIFVEHDWNPMNDLQAMDR-----AHRLGQKKVVNVYRLITK 1816 Query: 174 NTIDELVLQRLRTKSTIQDLLLN 196 NT++E ++ + K I ++N Sbjct: 1817 NTLEEKIMGLQKFKMNIASTIVN 1839 >gi|195121866|ref|XP_002005439.1| GI19071 [Drosophila mojavensis] gi|193910507|gb|EDW09374.1| GI19071 [Drosophila mojavensis] Length = 3199 Score = 98.9 bits (245), Expect = 3e-19, Method: Composition-based stats. Identities = 29/156 (18%), Positives = 63/156 (40%), Gaps = 19/156 (12%) Query: 55 KIKALEVIIEKA--NAAPIIVAYHFNSDLARLQ---------KAFPQGRTLDKDPCTI-Q 102 K++ L+ ++ + + +++ L L+ G T + + + Sbjct: 1681 KLQTLDRLLRQLKVDGHRVLIFTQMTKMLDVLEAFLNYHGHIYLRLDGSTRVEQRQILME 1740 Query: 103 EWNEGK-IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGF 161 +N K I S G G+NL G + ++F+ W+ Q +R + G Sbjct: 1741 RFNGDKRIFCFILSTRSGGVGVNLT-GADTVIFYDSDWNPTMDAQAQDRC-----HRIGQ 1794 Query: 162 KRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 R V +Y L+++ TI+ +L++ K + D+ + Sbjct: 1795 TRDVHIYRLVSEKTIEVNILKKANQKRMLSDMAIEG 1830 >gi|167462178|ref|ZP_02327267.1| SNF2-related protein [Paenibacillus larvae subsp. larvae BRL-230010] Length = 421 Score = 98.9 bits (245), Expect = 3e-19, Method: Composition-based stats. Identities = 43/203 (21%), Positives = 82/203 (40%), Gaps = 24/203 (11%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEV 61 KQY +FQ+ ++ G+ + + +K + QLA + EK + L Sbjct: 237 KQYREFQKHRMIEIDGKTLVGDTTLTKMLYLRQLAG------------MYNPEKPERLRE 284 Query: 62 IIEKANAAPIIVAYHFNSDLARLQKAFPQGRT----LDKDPCTIQEWNEGKIPLLFAHPA 117 ++E + +IV Y+F ++ +Q ++ D + + E + Sbjct: 285 LLESTSDR-VIVFYNFRAEFEVIQNLCQTLERPLSMINGDGRDLTAYLERDDSVTAVQFQ 343 Query: 118 SCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFK-RAVFVYYLIAQNTI 176 S G NLQ + V+ S D +Q + RI R+ G + F YYL+ + +I Sbjct: 344 SGALGENLQLAKH-AVYMSPPLDSILFEQSLARI-----RRIGQQSDTCFYYYLVTKGSI 397 Query: 177 DELVLQRLRTKSTIQDLLLNALK 199 +E + + L+ + L L+ Sbjct: 398 EEHIYETLKKRKDFTQYLFEELE 420 >gi|149635666|ref|XP_001513276.1| PREDICTED: similar to SWI/SNF-related matrix-associated actin-dependent regulator of chromatin a5 [Ornithorhynchus anatinus] Length = 1012 Score = 98.9 bits (245), Expect = 3e-19, Method: Composition-based stats. Identities = 42/230 (18%), Positives = 86/230 (37%), Gaps = 40/230 (17%) Query: 1 MKQY---HKFQRELYCDLQGENIEAFNSASKTVK------CLQL--ANGAVYYDEEKHW- 48 +K Y K QRE Y + ++I+ NSA K K +QL Y + Sbjct: 370 VKIYVGLSKMQREWYTRILMKDIDILNSAGKMDKMRLLNILMQLRKCCNHPYLFDGAEPG 429 Query: 49 --------KEVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQ---------KAFP 89 + K+ L+ ++ K + +++ L L+ Sbjct: 430 PPYTTDMHLVTNSGKMVVLDKLLPKLKEQDSRVLIFSQMTRVLDILEDYCMWRNYEYCRL 489 Query: 90 QGRTLDKDPCT-IQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 G+T + I +NE + + G G+NL ++++ + W+ + Q Sbjct: 490 DGQTPHDERQDSINAYNEPNSSKFVFMLSTRAGGLGINL-ATADVVILYDSDWNPQVDLQ 548 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 ++R + G + V V+ I NT++E +++R K + +++ Sbjct: 549 AMDR-----AHRIGQTKTVRVFRFITDNTVEERIVERAEMKLRLDSIVIQ 593 >gi|24656966|ref|NP_524833.2| domino, isoform A [Drosophila melanogaster] gi|160380691|sp|Q9NDJ2|DOM_DROME RecName: Full=Helicase domino gi|21645214|gb|AAM70871.1| domino, isoform A [Drosophila melanogaster] Length = 3198 Score = 98.9 bits (245), Expect = 3e-19, Method: Composition-based stats. Identities = 29/156 (18%), Positives = 63/156 (40%), Gaps = 19/156 (12%) Query: 55 KIKALEVIIEKA--NAAPIIVAYHFNSDLARLQ---------KAFPQGRTLDKDPCTI-Q 102 K++ ++ ++ + N +++ L L+ G T + + + Sbjct: 1659 KLQTMDRLLRQLKVNGHRVLIFTQMTKMLDVLEAFLNYHGHIYLRLDGSTRVEQRQILME 1718 Query: 103 EWNEGK-IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGF 161 +N K I S G G+NL G + ++F+ W+ Q +R + G Sbjct: 1719 RFNGDKRIFCFILSTRSGGVGINLT-GADTVIFYDSDWNPTMDAQAQDRC-----HRIGQ 1772 Query: 162 KRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 R V +Y L+++ TI+ +L++ K + D+ + Sbjct: 1773 TRDVHIYRLVSERTIEVNILKKANQKRMLSDMAIEG 1808 >gi|295674887|ref|XP_002797989.1| SNF2 family helicase/ATPase PasG [Paracoccidioides brasiliensis Pb01] gi|226280639|gb|EEH36205.1| SNF2 family helicase/ATPase PasG [Paracoccidioides brasiliensis Pb01] Length = 857 Score = 98.9 bits (245), Expect = 3e-19, Method: Composition-based stats. Identities = 28/163 (17%), Positives = 61/163 (37%), Gaps = 20/163 (12%) Query: 51 VHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQK-----------AFPQGRTLDKD 97 K+ L+ +I + I++ F + L LQ + Sbjct: 605 TSSGKMLLLDRLIPCLMSKNHKILIFSQFKTQLDILQDYAVYLRGWNCCRIDGAVSQVNR 664 Query: 98 PCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 I +N + + + G G+NL + ++ F W+ ++ Q R Sbjct: 665 QAQIAAFNTDPSYRIFLLSTRAGGQGINLT-AADTVILFDSDWNPQQDLQA-----QDRA 718 Query: 157 RQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 + G + V VY L + T+++ +L++ +K ++ L++ K Sbjct: 719 HRIGQTKPVIVYRLATRGTVEQTLLEKADSKRKLEKLVIQKGK 761 >gi|195426563|ref|XP_002061395.1| GK20897 [Drosophila willistoni] gi|194157480|gb|EDW72381.1| GK20897 [Drosophila willistoni] Length = 3304 Score = 98.9 bits (245), Expect = 3e-19, Method: Composition-based stats. Identities = 29/156 (18%), Positives = 63/156 (40%), Gaps = 19/156 (12%) Query: 55 KIKALEVIIEKA--NAAPIIVAYHFNSDLARLQ---------KAFPQGRTLDKDPCTI-Q 102 K++ L+ ++ + + +++ L L+ G T + + + Sbjct: 1736 KLQTLDRLLRQLKVDGHRVLIFTQMTKMLDVLEAFLNYHGHIYLRLDGSTRVEQRQILME 1795 Query: 103 EWNEGK-IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGF 161 +N K I S G G+NL G + ++F+ W+ Q +R + G Sbjct: 1796 RFNGDKRIFCFILSTRSGGVGINLT-GADTVIFYDSDWNPTMDAQAQDRC-----HRIGQ 1849 Query: 162 KRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 R V +Y L+++ TI+ +L++ K + D+ + Sbjct: 1850 TRDVHIYRLVSEKTIEVNILKKANQKRMLSDMAIEG 1885 >gi|149248292|ref|XP_001528533.1| chromatin remodelling complex ATPase chain ISW1 [Lodderomyces elongisporus NRRL YB-4239] gi|146448487|gb|EDK42875.1| chromatin remodelling complex ATPase chain ISW1 [Lodderomyces elongisporus NRRL YB-4239] Length = 917 Score = 98.9 bits (245), Expect = 3e-19, Method: Composition-based stats. Identities = 45/222 (20%), Positives = 89/222 (40%), Gaps = 38/222 (17%) Query: 7 FQRELYCDLQGENIEAFNSASK----------TVKCLQLANGAVYYD--------EEKHW 48 QR LY + ++I+A N A+K ++ + N +D Sbjct: 265 MQRNLYQKILEKDIDAVNGANKKESKTRLLNIVMQLRKCCNHPYLFDGVEPGPPFTTDEH 324 Query: 49 KEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARL---------QKAFPQGRTLDKD 97 + +K+ L+ +++K A + +++ + L L Q G+T D Sbjct: 325 LVFNAQKMIILDKLLKKFKAEGSRVLIFSQMSRMLDILEDYCYFREYQYCRIDGQTEHVD 384 Query: 98 P-CTIQEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 I E+N+ + + + G G+NL +I++ F W+ + Q ++R Sbjct: 385 RINAIDEYNKPGSEKFVFLLTTRAGGLGINLT-SADIVILFDSDWNPQADLQAMDR---- 439 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + G + V V+ I +N I+E VL+R K + L++ Sbjct: 440 -AHRIGQTKQVKVFRFITENAIEEKVLERAAQKLRLDQLVIQ 480 >gi|326483055|gb|EGE07065.1| SWI/SNF family DNA-dependent ATPase Ris1 [Trichophyton equinum CBS 127.97] Length = 1168 Score = 98.9 bits (245), Expect = 3e-19, Method: Composition-based stats. Identities = 27/166 (16%), Positives = 63/166 (37%), Gaps = 22/166 (13%) Query: 45 EKHWKEVHDEKIKALEVIIEK---ANAAPIIVAYHFNSDLARLQ----------KAFPQG 91 +K W+ K+ I++ + I+ F S L ++ + + Sbjct: 988 DKRWE--TSAKVDKTIEILQSLRDSGDEKTIIFSQFTSLLDLIEVPINRRGWNYRRYDGS 1045 Query: 92 -RTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 + D++ + + ++ + GLNL + ++ +W+ Q I+R Sbjct: 1046 MKPADRNDSVLDFTDNPDCRIMLVSLKAGNSGLNL-VAASQVIILDPFWNPYIEDQAIDR 1104 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + G R V V+ L+ +NT+++ ++ K I + L+ Sbjct: 1105 -----AHRIGQLRPVMVHRLLVENTVEDRIIALQDKKRQIIEGALD 1145 >gi|326469389|gb|EGD93398.1| SWI/SNF family DNA-dependent ATPase Ris1 [Trichophyton tonsurans CBS 112818] Length = 1141 Score = 98.9 bits (245), Expect = 3e-19, Method: Composition-based stats. Identities = 27/166 (16%), Positives = 63/166 (37%), Gaps = 22/166 (13%) Query: 45 EKHWKEVHDEKIKALEVIIEK---ANAAPIIVAYHFNSDLARLQ----------KAFPQG 91 +K W+ K+ I++ + I+ F S L ++ + + Sbjct: 948 DKRWE--TSAKVDKTIEILQSLRDSGDEKTIIFSQFTSLLDLIEVPINRRGWNYRRYDGS 1005 Query: 92 -RTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 + D++ + + ++ + GLNL + ++ +W+ Q I+R Sbjct: 1006 MKPADRNDSVLDFTDNPDCRIMLVSLKAGNSGLNL-VAASQVIILDPFWNPYIEDQAIDR 1064 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + G R V V+ L+ +NT+++ ++ K I + L+ Sbjct: 1065 -----AHRIGQLRPVMVHRLLVENTVEDRIIALQDKKRQIIEGALD 1105 >gi|324500954|gb|ADY40432.1| Chromatin-remodeling complex ATPase chain isw-1 [Ascaris suum] Length = 1053 Score = 98.9 bits (245), Expect = 3e-19, Method: Composition-based stats. Identities = 42/230 (18%), Positives = 84/230 (36%), Gaps = 40/230 (17%) Query: 1 MKQY---HKFQRELYCDLQGENIEAFNSASKTVK---------CLQLAN----------G 38 +K Y K QRE Y + ++I+ N A K K + N G Sbjct: 384 VKIYVGLSKMQREWYTKILLKDIDVVNGAGKLEKARIMNILMHLRKCCNHPYLFDGAEPG 443 Query: 39 AVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARL---------QKAFP 89 Y ++ + + K + +++ + L L Q Sbjct: 444 PPYTTDQHLVDNAGKMVLLDKLLKKLKEQGSRVLIFSQMSRMLDLLEDYCWWRNYQYCRL 503 Query: 90 QGRTLDKDPCT-IQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 G+T D I E+N + + G G+NL ++++ + W+ + Q Sbjct: 504 DGQTAHADRQMSIDEFNRPDSEKFIFMLTTRAGGLGINLT-AADVVIIYDSDWNPQVDLQ 562 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 ++R + G K+ V V+ I ++T+DE +++R K + +++ Sbjct: 563 AMDR-----AHRIGQKKQVRVFRFITESTVDERIIERAEMKLHLDSIVIQ 607 >gi|302844141|ref|XP_002953611.1| hypothetical protein VOLCADRAFT_118418 [Volvox carteri f. nagariensis] gi|300261020|gb|EFJ45235.1| hypothetical protein VOLCADRAFT_118418 [Volvox carteri f. nagariensis] Length = 1130 Score = 98.9 bits (245), Expect = 3e-19, Method: Composition-based stats. Identities = 30/160 (18%), Positives = 63/160 (39%), Gaps = 20/160 (12%) Query: 53 DEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQKAF----------PQGRTLDKDPCT 100 KIK L+ ++ K + +++ + + L L+ G +D+ Sbjct: 798 SAKIKHLDELLPKLKEKGSRVLLFSQWTTVLDLLEWYMHLRGYTYCRLDGGTQVDERLAL 857 Query: 101 IQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQ 158 + +N + P + + G GLNL G + ++ + ++ + +Q +R + Sbjct: 858 VDAFNAPESPYFVFLLSTRAGGQGLNLT-GADTVILHDVDFNPQIDKQAEDR-----AHR 911 Query: 159 AGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNAL 198 G R V VY LI + T+D + K + +L + Sbjct: 912 LGQTRTVAVYRLITKGTVDSNIQAIAERKLALDHAVLTDV 951 >gi|312212592|emb|CBX92675.1| similar to chromodomain helicase (Chd1) [Leptosphaeria maculans] Length = 1610 Score = 98.9 bits (245), Expect = 4e-19, Method: Composition-based stats. Identities = 35/197 (17%), Positives = 71/197 (36%), Gaps = 21/197 (10%) Query: 9 RELYCDLQGENIEAFNSASKT-VKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEK-- 65 ++ ++ E +A N A + G DE K+ L+ ++ K Sbjct: 736 KQSLLNIVMELKKASNHALLFPNAEAKFIRGDATKDETLKALITTSGKMMLLDRLLGKLK 795 Query: 66 ANAAPIIVAYHFNSDLARLQ----------KAFPQGRTLDKDPCTIQEWNEGKIP--LLF 113 A+ +++ L L + + I +N Sbjct: 796 ADGHRVLIFSQMVHMLDILTDYLKLRNYPFQRLDGTVPAAERKIAIDHFNAPGSDDYCFL 855 Query: 114 AHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQ 173 + G G+NL + ++ F W+ + Q + R + G ++ V VY L+++ Sbjct: 856 LSTRAGGLGINLMT-ADTVIIFDSDWNPQADLQAMAR-----AHRIGQQKPVSVYRLVSK 909 Query: 174 NTIDELVLQRLRTKSTI 190 +TI+E +L+R R K + Sbjct: 910 DTIEEEILERARNKRML 926 >gi|70989932|ref|XP_749815.1| SWI/SNF family DNA-dependent ATPase [Aspergillus fumigatus Af293] gi|66847447|gb|EAL87777.1| SWI/SNF family DNA-dependent ATPase, putative [Aspergillus fumigatus Af293] Length = 1005 Score = 98.9 bits (245), Expect = 4e-19, Method: Composition-based stats. Identities = 31/163 (19%), Positives = 61/163 (37%), Gaps = 22/163 (13%) Query: 51 VHDEKIKALEVIIEK----ANAAPIIVAYHFNS--DLARL---------QKAFPQGRTLD 95 + KI I+E+ II+ F S DL + ++ R D Sbjct: 822 ITSSKIDKALEIVEQIQNDGTGDKIIIFSQFTSLLDLMEIPLQRRGWLFRRYDGSMRLAD 881 Query: 96 KDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTR 155 + ++ L+ + GLNL +++ +W+ +Q I R+ Sbjct: 882 RHAVVVEFSTNPNCRLMLVSLRAGNAGLNLTAASKVIIL-DPFWNPFVEEQAIGRV---- 936 Query: 156 QRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTI-QDLLLNA 197 + G +R V VY ++ +T+++ + K + Q L +A Sbjct: 937 -HRIGQQRPVHVYRILTPDTVEDRIQNLQDEKRRLVQGALSDA 978 >gi|302813585|ref|XP_002988478.1| hypothetical protein SELMODRAFT_128101 [Selaginella moellendorffii] gi|300143880|gb|EFJ10568.1| hypothetical protein SELMODRAFT_128101 [Selaginella moellendorffii] Length = 562 Score = 98.9 bits (245), Expect = 4e-19, Method: Composition-based stats. Identities = 29/171 (16%), Positives = 66/171 (38%), Gaps = 19/171 (11%) Query: 33 LQLANGAVYYDEEKHWKEV-HDEKIKALEVIIEKA-NAAPIIVAYHFNSDLARLQKAFPQ 90 LQL + ++ +E+ K+KA ++++ + ++ + S L ++ + Sbjct: 367 LQLEAQERQEEFDRKVQEIGQSAKLKAAMMVLDMTPHGEKSLIFSQWTSMLDLIEPQLEE 426 Query: 91 G-----------RTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWW 139 T + + + ++ ++ + G GLNL ++ +WW Sbjct: 427 AGIQFSRIDGSMSTRKRVAAIKRFSEDPEVAVMLISLRAGGCGLNL-VAATRVLLMDMWW 485 Query: 140 DLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 + Q I+R + G R V V + + T++E +LQ K + Sbjct: 486 NPTTEDQAIDR-----THRIGQTRPVHVTRFVVKETVEERILQIQEEKKKL 531 >gi|281209483|gb|EFA83651.1| SNF2-related domain-containing protein [Polysphondylium pallidum PN500] Length = 934 Score = 98.9 bits (245), Expect = 4e-19, Method: Composition-based stats. Identities = 35/156 (22%), Positives = 60/156 (38%), Gaps = 18/156 (11%) Query: 54 EKIKALEVIIEKANAAPIIVAYHFN---SDLARLQKA-------FPQGRTLDKDPCTIQE 103 + I L I ++V ++ S LARL DK + + Sbjct: 647 QFIDTLMQQIRNKTKDRVVVISNYTQTLSVLARLCNERGYPFFQLDGSTPSDKRQVLVDK 706 Query: 104 WNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGF 161 +N+ P + + G GLNL G N L+ W+ Q + R+ + G Sbjct: 707 FNDPSSPQFVFLLSSKAGGIGLNL-IGANHLILVDPDWNPANDAQAMARVW-----REGQ 760 Query: 162 KRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 K+ V +Y ++ TI+E + QR TK + ++ Sbjct: 761 KKVVSIYRTLSTGTIEEKIYQRQITKMALSVSVVEG 796 >gi|295666383|ref|XP_002793742.1| DNA repair protein RAD16 [Paracoccidioides brasiliensis Pb01] gi|226278036|gb|EEH33602.1| DNA repair protein RAD16 [Paracoccidioides brasiliensis Pb01] Length = 1240 Score = 98.9 bits (245), Expect = 4e-19, Method: Composition-based stats. Identities = 30/165 (18%), Positives = 64/165 (38%), Gaps = 26/165 (15%) Query: 52 HDEKIKALEVI-------IEKANAAPI--IVAYHFNSDLARLQ----------KAFPQGR 92 KI+ I I + P I+ F S L L+ + + Sbjct: 1058 TSAKIEKTMEILHDIQSRIPTGDDKPEKTIIFSQFTSLLDLLEVPILRKGWGYRRYDGSM 1117 Query: 93 TLDKDPCTIQEWNEGK-IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERI 151 ++ + ++ + K ++ + GLNL + ++ F +W+ +Q I+R Sbjct: 1118 NPNQRNEAVMKFTDSKDCTIMLVSLKAGNAGLNL-VAASQVIIFDPFWNPYIEEQAIDR- 1175 Query: 152 GVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + G R V V+ ++ +NT+++ +L K T+ + L+ Sbjct: 1176 ----AHRIGQVRPVVVHRILVKNTVEDRILDLQEKKRTLIEGALD 1216 >gi|194761570|ref|XP_001963002.1| GF14153 [Drosophila ananassae] gi|190616699|gb|EDV32223.1| GF14153 [Drosophila ananassae] Length = 842 Score = 98.9 bits (245), Expect = 4e-19, Method: Composition-based stats. Identities = 30/164 (18%), Positives = 66/164 (40%), Gaps = 19/164 (11%) Query: 52 HDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQKAF---------PQGRTLDKDPCT 100 K L+ ++ K +++ F L +++ G T K+ Sbjct: 648 DSGKFGYLDELLPKLREEGHRVLLFSQFTMMLDIVEEYLRVRNHGFCRLDGSTAVKERQD 707 Query: 101 -IQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQ 158 I ++N + I + + G G+NL ++ + ++ +Q +R + Sbjct: 708 LITDFNVDDNIFVFLLSTKAGGVGINLTAADTCIIH-DIDFNPYNDKQAEDRC-----HR 761 Query: 159 AGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKET 202 G +R V +Y LI+++TI+E +L K ++ + ++ K E Sbjct: 762 MGQQRPVTIYRLISESTIEEGILMAAEEKLKLEKDITSSEKGEV 805 >gi|167535979|ref|XP_001749662.1| hypothetical protein [Monosiga brevicollis MX1] gi|163771810|gb|EDQ85471.1| predicted protein [Monosiga brevicollis MX1] Length = 1288 Score = 98.9 bits (245), Expect = 4e-19, Method: Composition-based stats. Identities = 40/211 (18%), Positives = 77/211 (36%), Gaps = 36/211 (17%) Query: 3 QYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVI 62 + + +++L +L A A+ L G K++ L+ + Sbjct: 759 LFKEVEQDLKSELLRHEDAATALANLNGLELWRTAG----------------KLELLDHM 802 Query: 63 IEKAN--AAPIIVAYHFNSDLARLQKAFPQGRTLD----------KDPCTIQEWNEGK-- 108 I K I++ F + L L+ F R K + ++N Sbjct: 803 IPKLRRFGHRILLFSQFTTMLDILEDYFRYRRLKYCRMDGTCGAAKRAELLHDFNAPDSD 862 Query: 109 IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVY 168 + + + G GLNLQ + +V F W+ + Q R + G + V V+ Sbjct: 863 LEIFILSTRAGGLGLNLQT-ADTVVIFDSDWNPHQDLQA-----QDRAHRIGQTKEVRVF 916 Query: 169 YLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 L+ +++E +L+R R K + ++ A K Sbjct: 917 RLVTVQSVEERMLERAREKLDVDQQVIQAGK 947 >gi|268573820|ref|XP_002641887.1| C. briggsae CBR-ISW-1 protein [Caenorhabditis briggsae] Length = 1012 Score = 98.9 bits (245), Expect = 4e-19, Method: Composition-based stats. Identities = 41/230 (17%), Positives = 88/230 (38%), Gaps = 40/230 (17%) Query: 1 MKQY---HKFQRELYCDLQGENIEAFNSASKTVK---------CLQLANGAVYYD--EEK 46 +K Y K QRE Y + ++I+ N A K K + N +D E Sbjct: 366 VKVYVGLSKMQREWYTKILLKDIDVINGAGKVEKARLMNILMHLRKCVNHPYLFDGAEPG 425 Query: 47 HWKEVHDEKIK------ALEVIIEKAN--AAPIIVAYHFNSDLARLQ---------KAFP 89 + L+ ++ + + +++ F+ L L+ Sbjct: 426 PPYTTDQHLVDNCGKMVVLDKLLSRLQEQGSRVLIFSQFSRMLDLLEDYCWWRKYEYCRL 485 Query: 90 QGRTLDKDPC-TIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 G T D I+ +N + + G G+NL ++++ + W+ + Q Sbjct: 486 DGSTAHVDRTSAIEAYNAPDSKKFIFMLTTRAGGLGINL-ATADVVIIYDSDWNPQSDLQ 544 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 ++R + G K+ V V+ LI +NT+D+ ++++ K + ++++ Sbjct: 545 AMDR-----AHRIGQKKQVKVFRLITENTVDDRIIEKAEAKLRLDNIVIQ 589 >gi|268579039|ref|XP_002644502.1| Hypothetical protein CBG14390 [Caenorhabditis briggsae] gi|187027870|emb|CAP32941.1| hypothetical protein CBG_14390 [Caenorhabditis briggsae AF16] Length = 2938 Score = 98.9 bits (245), Expect = 4e-19, Method: Composition-based stats. Identities = 33/161 (20%), Positives = 67/161 (41%), Gaps = 20/161 (12%) Query: 53 DEKIKALEVIIE--KANAAPIIVAYHFNSDLAR---------LQKAFPQGRTL-DKDPCT 100 K++ L+ I+ +A+ +++ + + + +Q G T D+ Sbjct: 1947 SGKLELLDRILPKLQASGHRVLMFFQMTAMMTIVEDYLAGGNIQYLRLDGSTKTDERGAL 2006 Query: 101 IQEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQ 158 + ++N + L + G GLNLQ + ++ F W+ + Q R + Sbjct: 2007 LDKFNAPNSEYFLFMLSTRAGGLGLNLQT-ADTVIIFDSDWNPHQDMQA-----QDRAHR 2060 Query: 159 AGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 G K V V+ LI N+++E +L R K + + ++ A K Sbjct: 2061 IGQKAEVRVFRLITANSVEEKILASARFKLNVDEKVIQAGK 2101 >gi|226293312|gb|EEH48732.1| conserved hypothetical protein [Paracoccidioides brasiliensis Pb18] Length = 1234 Score = 98.9 bits (245), Expect = 4e-19, Method: Composition-based stats. Identities = 29/165 (17%), Positives = 63/165 (38%), Gaps = 26/165 (15%) Query: 52 HDEKIKALEVI-------IEKANAAPI--IVAYHFNSDLARLQ----------KAFPQGR 92 KI+ I I + P I+ F S L L+ + + Sbjct: 1052 TSAKIEKTMEILHDIQSRIPTGDDKPEKTIIFSQFTSLLDLLEVPILRKGWGYRRYDGSM 1111 Query: 93 TLDKDPCTIQEWNEGK-IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERI 151 ++ + ++ + K ++ + GLNL + ++ F +W+ +Q I+R Sbjct: 1112 NPNQRNEAVMKFTDSKDCTIMLVSLKAGNAGLNL-VAASQVIIFDPFWNPYIEEQAIDR- 1169 Query: 152 GVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + G R V V+ ++ +NT+++ +L K + + L+ Sbjct: 1170 ----AHRIGQVRPVVVHRILVKNTVEDRILDLQEKKRALIEGALD 1210 >gi|225683923|gb|EEH22207.1| DNA repair protein RAD5 [Paracoccidioides brasiliensis Pb03] Length = 1239 Score = 98.9 bits (245), Expect = 4e-19, Method: Composition-based stats. Identities = 29/165 (17%), Positives = 63/165 (38%), Gaps = 26/165 (15%) Query: 52 HDEKIKALEVI-------IEKANAAPI--IVAYHFNSDLARLQ----------KAFPQGR 92 KI+ I I + P I+ F S L L+ + + Sbjct: 1057 TSAKIEKTMEILHDIQSRIPTGDDKPEKTIIFSQFTSLLDLLEVPILRKGWGYRRYDGSM 1116 Query: 93 TLDKDPCTIQEWNEGK-IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERI 151 ++ + ++ + K ++ + GLNL + ++ F +W+ +Q I+R Sbjct: 1117 NPNQRNEAVMKFTDSKDCTIMLVSLKAGNAGLNL-VAASQVIIFDPFWNPYIEEQAIDR- 1174 Query: 152 GVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + G R V V+ ++ +NT+++ +L K + + L+ Sbjct: 1175 ----AHRIGQVRPVVVHRILVKNTVEDRILDLQEKKRALIEGALD 1215 >gi|261188034|ref|XP_002620434.1| DNA repair and recombination protein RAD26 [Ajellomyces dermatitidis SLH14081] gi|239593445|gb|EEQ76026.1| DNA repair and recombination protein RAD26 [Ajellomyces dermatitidis SLH14081] Length = 1260 Score = 98.9 bits (245), Expect = 4e-19, Method: Composition-based stats. Identities = 29/163 (17%), Positives = 59/163 (36%), Gaps = 20/163 (12%) Query: 53 DEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQ-----------KAFPQGRTLDKDPC 99 K++ ++ ++E + ++ L L+ + + Sbjct: 770 SGKMQIVKSLLELWRDTGHKTLLFAQHRIMLDILERFIKSLSGFKYQRMDGNTPIKLRQS 829 Query: 100 TIQEWNE-GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQ 158 + E+N I + G G+NL G + ++ + W+ Q ER + Sbjct: 830 MVDEFNNNPDIHVFLLTTKVGGLGVNLT-GADRVIIYDPDWNPSTDVQARERSW-----R 883 Query: 159 AGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 G KR V +Y L+ TI+E + R K + + +L K+ Sbjct: 884 LGQKREVTIYRLMTAGTIEEKIYHRQIFKQFLTNKILKDPKQR 926 >gi|171686770|ref|XP_001908326.1| hypothetical protein [Podospora anserina S mat+] gi|170943346|emb|CAP68999.1| unnamed protein product [Podospora anserina S mat+] Length = 1395 Score = 98.9 bits (245), Expect = 4e-19, Method: Composition-based stats. Identities = 42/225 (18%), Positives = 90/225 (40%), Gaps = 33/225 (14%) Query: 2 KQYHKF---QRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKH----WKEVHD- 53 + Y + Q+ L D +G A ++ ++ +L N +DE ++ +D Sbjct: 818 RLYKQMVTHQKILVSDGKGGKTGARGLSNMIMQLRKLCNHPFVFDEVENQMNPMSVSNDL 877 Query: 54 -----EKIKALEVIIEK--ANAAPIIVAYHFNSDLAR---------LQKAFPQGRTLDKD 97 K + L+ I+ K A +++ + + + +Q G T +D Sbjct: 878 LWRTAGKFELLDRILPKYKATGHRVLMFFQMTAIMDIMEDFLRFRGIQYLRLDGTTKSED 937 Query: 98 PCTI-QEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 + +++N P + + G GLNLQ + ++ + W+ + Q Sbjct: 938 RSDLLRDFNRPDSPYFMFLLSTRAGGLGLNLQT-ADTVIIYDSDWNPHQDLQA-----QD 991 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 R + G K V + LI+ +++E +L+R R K + ++ A + Sbjct: 992 RAHRIGQKNEVRILRLISSASVEEKILERARFKLDMDGKVIQAGR 1036 >gi|39940416|ref|XP_359745.1| hypothetical protein MGG_05032 [Magnaporthe oryzae 70-15] gi|145010723|gb|EDJ95379.1| hypothetical protein MGG_05032 [Magnaporthe oryzae 70-15] Length = 1166 Score = 98.9 bits (245), Expect = 4e-19, Method: Composition-based stats. Identities = 30/152 (19%), Positives = 55/152 (36%), Gaps = 17/152 (11%) Query: 54 EKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGR----------TLDKDPCTIQE 103 I+ L + + A ++V F S L ++ + + ++E Sbjct: 1000 ALIQHLRDLRRERPRAKVVVFSQFTSFLTLIEGSLDRANMHHVRLDGTMAQKTRVAVLEE 1059 Query: 104 WNE-GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFK 162 + K + + G GLNL + + WW Q I+R+ + G Sbjct: 1060 FKACSKFTVFLISLRAGGVGLNLTE-ASRVYMCDPWWSFSVESQAIDRV-----HRMGQS 1113 Query: 163 RAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 V VY I +N+++E +L+ K I L Sbjct: 1114 EEVKVYRFIVKNSVEERMLKIQDRKKFIATSL 1145 >gi|17508659|ref|NP_492438.1| RADiation sensitivity abnormal/yeast RAD-related family member (rad-54) [Caenorhabditis elegans] gi|6580237|emb|CAB63308.1| C. elegans protein W06D4.6, partially confirmed by transcript evidence [Caenorhabditis elegans] gi|6580248|emb|CAA22254.2| C. elegans protein W06D4.6, partially confirmed by transcript evidence [Caenorhabditis elegans] Length = 818 Score = 98.9 bits (245), Expect = 4e-19, Method: Composition-based stats. Identities = 31/127 (24%), Positives = 53/127 (41%), Gaps = 12/127 (9%) Query: 80 DLARLQKAFPQGRTLDKDPCTIQEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSL 137 D RL + + + + +N+ I + G GLNL G N LV F Sbjct: 590 DFVRLDGSMS----IKQRSKIVDTFNDPASTIFCFLLSSKAGGCGLNL-IGANRLVMFDP 644 Query: 138 WWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 W+ Q + R+ + G K+ F+Y L+A +I+E + QR K + +++A Sbjct: 645 DWNPANDDQAMARVW-----RDGQKKMCFIYRLLATGSIEEKMFQRQTHKKALSSCVVDA 699 Query: 198 LKKETIH 204 + H Sbjct: 700 GEDVARH 706 >gi|302698345|ref|XP_003038851.1| hypothetical protein SCHCODRAFT_104375 [Schizophyllum commune H4-8] gi|300112548|gb|EFJ03949.1| hypothetical protein SCHCODRAFT_104375 [Schizophyllum commune H4-8] Length = 1135 Score = 98.9 bits (245), Expect = 4e-19, Method: Composition-based stats. Identities = 35/166 (21%), Positives = 62/166 (37%), Gaps = 22/166 (13%) Query: 52 HDEKIKALEV----IIEKANAAPIIVAYHFNSDLARL----------QKAFPQGRTLDKD 97 K+KAL + ++ +V F S + + Q F + K Sbjct: 958 TSTKLKALMDNLLRLKKEDPGFRAVVFSQFTSFMDLIEITLKREGFDQYRFDGSMDVKKR 1017 Query: 98 PCTIQEWNEG-KIP-LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTR 155 I E+ P ++ + G GLNL N + WW+ Q I+R+ Sbjct: 1018 NHAISEFKAPSDAPKIMVVSLKAGGVGLNLTN-ANYVFMMDCWWNAATENQAIDRV---- 1072 Query: 156 QRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 + G ++ VFV + I +TI+ +LQ + K+ I ++ Sbjct: 1073 -HRLGQEKPVFVKHFIISDTIEGRILQIQKRKTAIVKEAFRGTARD 1117 >gi|239615027|gb|EEQ92014.1| DNA repair and recombination protein RAD26 [Ajellomyces dermatitidis ER-3] gi|327349863|gb|EGE78720.1| DNA repair and recombination protein RAD26 [Ajellomyces dermatitidis ATCC 18188] Length = 1260 Score = 98.9 bits (245), Expect = 4e-19, Method: Composition-based stats. Identities = 29/163 (17%), Positives = 59/163 (36%), Gaps = 20/163 (12%) Query: 53 DEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQ-----------KAFPQGRTLDKDPC 99 K++ ++ ++E + ++ L L+ + + Sbjct: 770 SGKMQIVKSLLELWRDTGHKTLLFAQHRIMLDILERFIKSLSGFKYQRMDGNTPIKLRQS 829 Query: 100 TIQEWNE-GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQ 158 + E+N I + G G+NL G + ++ + W+ Q ER + Sbjct: 830 MVDEFNNNPDIHVFLLTTKVGGLGVNLT-GADRVIIYDPDWNPSTDVQARERSW-----R 883 Query: 159 AGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 G KR V +Y L+ TI+E + R K + + +L K+ Sbjct: 884 LGQKREVTIYRLMTAGTIEEKIYHRQIFKQFLTNKILKDPKQR 926 >gi|194756516|ref|XP_001960523.1| GF13400 [Drosophila ananassae] gi|190621821|gb|EDV37345.1| GF13400 [Drosophila ananassae] Length = 1027 Score = 98.9 bits (245), Expect = 4e-19, Method: Composition-based stats. Identities = 42/225 (18%), Positives = 89/225 (39%), Gaps = 37/225 (16%) Query: 6 KFQRELYCDLQGENIEAFNSASKTVK------CLQL---ANGAVYYD--------EEKHW 48 K QR+ Y + ++I+ N A K K +QL N +D Sbjct: 366 KMQRDWYTKVLLKDIDIVNGAGKVEKMRLQNILMQLRKCTNHPYLFDGAEPGPPYTTDTH 425 Query: 49 KEVHDEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQ---------KAFPQGRTLDKD 97 + K+ L+ ++ K + +++ L L+ G+T +D Sbjct: 426 LIYNSGKMAILDKLLPKLQEQGSRVLIFSQMTRMLDILEDYCHWRGYNYCRLDGQTPHED 485 Query: 98 P-CTIQEWN--EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 IQE+N + + G G+NL ++++ + W+ + Q ++R Sbjct: 486 RNRQIQEYNMDNSTKFIFMLSTRAGGLGINL-ATADVVIIYDSDWNPQMDLQAMDR---- 540 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 + G K+ V V+ LI ++T++E +++R K + +++ + Sbjct: 541 -AHRIGQKKQVRVFRLITESTVEEKIVERAEVKLRLDKMVIQGGR 584 >gi|15226870|ref|NP_178318.1| ETL1; ATP binding / DNA binding / helicase/ nucleic acid binding [Arabidopsis thaliana] gi|4038042|gb|AAC97224.1| putative helicase [Arabidopsis thaliana] gi|16648975|gb|AAL24339.1| SNF2/RAD54 family (ETL1 subfamily) protein [Arabidopsis thaliana] gi|27311941|gb|AAO00936.1| SNF2/RAD54 family (ETL1 subfamily) protein [Arabidopsis thaliana] gi|330250451|gb|AEC05545.1| SNF2 and helicase domain-containing protein [Arabidopsis thaliana] Length = 763 Score = 98.9 bits (245), Expect = 4e-19, Method: Composition-based stats. Identities = 29/162 (17%), Positives = 64/162 (39%), Gaps = 19/162 (11%) Query: 49 KEVHDEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQ---------KAFPQGRTLDKD 97 + K + L ++ +++ + S L L+ G T D Sbjct: 583 HVMLSAKCRTLAELLPSMKKSGHRVLIFSQWTSMLDILEWTLDVIGVTYRRLDGSTQVTD 642 Query: 98 PCTIQE-WNEGK-IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTR 155 TI + +N K I + G GLNL G + ++ + ++ + +Q +R Sbjct: 643 RQTIVDTFNNDKSIFACLLSTRAGGQGLNLT-GADTVIIHDMDFNPQIDRQAEDRC---- 697 Query: 156 QRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + G + V ++ L+ ++T+DE + + + K + +L + Sbjct: 698 -HRIGQTKPVTIFRLVTKSTVDENIYEIAKRKLVLDAAVLES 738 >gi|317030518|ref|XP_001392709.2| SNF2 family helicase/ATPase PasG [Aspergillus niger CBS 513.88] Length = 892 Score = 98.9 bits (245), Expect = 4e-19, Method: Composition-based stats. Identities = 29/172 (16%), Positives = 64/172 (37%), Gaps = 20/172 (11%) Query: 46 KHWKEVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQK-----------AFPQGR 92 K+ L+ ++ I++ F + L LQ Sbjct: 642 DETLVTASGKMLLLDRLVPCLLNKGHKILIFSQFKTQLDILQDWATQLRSWNCCRIDGAV 701 Query: 93 TLDKDPCTIQEWNEGKI-PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERI 151 + + I+ +N K L + G G+NL + ++ F W+ ++ Q Sbjct: 702 SQEDRRAQIKAFNTDKNYKLFLLSTRAGGQGINL-MAADTVILFDSDWNPQQDLQA---- 756 Query: 152 GVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETI 203 R + G + V VY L + T+++ +L++ +K ++ L++ K ++ Sbjct: 757 -QDRAHRIGQTKPVIVYRLATKGTVEQTLLEKADSKRRLERLVIQKGKFRSL 807 >gi|307206264|gb|EFN84329.1| Helicase domino [Harpegnathos saltator] Length = 4084 Score = 98.9 bits (245), Expect = 4e-19, Method: Composition-based stats. Identities = 30/156 (19%), Positives = 66/156 (42%), Gaps = 19/156 (12%) Query: 55 KIKALEVIIEK--ANAAPIIVAYHFNSDLARLQK----------AFPQGRTLDKDPCTIQ 102 K+++L+ ++ K ++ +++ L L+ +D+ ++ Sbjct: 1703 KLQSLDRLLRKLKSDNHRVLIFTQMTRMLDVLEAFLNFHGHIYLRLDGTTRVDQRQVLME 1762 Query: 103 EWNEGK-IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGF 161 +N K I S G G+NL G + ++F+ W+ Q +R + G Sbjct: 1763 RFNGDKRIFCFILSTRSGGVGVNLT-GADTVIFYDSDWNPTMDAQAQDRC-----HRIGQ 1816 Query: 162 KRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 R V +Y L+++ T++E +L++ K + DL + Sbjct: 1817 TRDVHIYRLVSEKTVEENILKKANQKRLLGDLAIEG 1852 >gi|323456317|gb|EGB12184.1| hypothetical protein AURANDRAFT_19973 [Aureococcus anophagefferens] Length = 216 Score = 98.9 bits (245), Expect = 4e-19, Method: Composition-based stats. Identities = 30/141 (21%), Positives = 54/141 (38%), Gaps = 21/141 (14%) Query: 65 KANAAPIIVAYHFNSDLA---------------RLQKAFPQGRTLDKDPCTIQEWNEGKI 109 +A ++V L RL + T+ I++++ Sbjct: 82 RARGEKVLVFSQSLRSLDYLQISVVSGDLGWPARLARRLDGDTTVTARQALIEDFSSSDA 141 Query: 110 PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYY 169 + F + G G+NL + ++ F + W+ + Q I R + G +R VFVY Sbjct: 142 VVFFLSVRAAGVGINL-HAATRVILFDVSWNPADDAQAIAR-----AHRFGQERPVFVYR 195 Query: 170 LIAQNTIDELVLQRLRTKSTI 190 L+A T++E V R K + Sbjct: 196 LVAAGTVEERVFNRQIAKGAV 216 >gi|71649758|ref|XP_813592.1| helicase-like protein [Trypanosoma cruzi strain CL Brener] gi|70878490|gb|EAN91741.1| helicase-like protein, putative [Trypanosoma cruzi] Length = 929 Score = 98.9 bits (245), Expect = 4e-19, Method: Composition-based stats. Identities = 36/201 (17%), Positives = 73/201 (36%), Gaps = 25/201 (12%) Query: 11 LYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEK--ANA 68 L + G + A A + A+ + DE K+ L+ ++ + AN Sbjct: 483 LALRILGVEVRASAQAGWEERL---ASAGIELDEASIIA--PSAKMIELDRMLREFKANG 537 Query: 69 APIIVAYHFNSDLARLQ----------KAFPQGRTLDKDPCTIQEWNEG--KIPLLFAHP 116 ++ +F S L LQ + + ++ +N + Sbjct: 538 HRCLIFSNFTSILDLLQALCVLRGYGFERIDGSTPRVERELSMIRFNAPGSACFVFLLTT 597 Query: 117 ASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTI 176 + G G+ L G + ++ F + I+R R + G R V V+ L +NTI Sbjct: 598 TAGGVGVTLT-GADTVILFD-----AHYNPQIDRQAADRAHRIGQTRVVRVHRLCLKNTI 651 Query: 177 DELVLQRLRTKSTIQDLLLNA 197 +E + K+++ D +++ Sbjct: 652 EERIHDVALRKASLGDFIVDG 672 >gi|145512399|ref|XP_001442116.1| hypothetical protein [Paramecium tetraurelia strain d4-2] gi|124409388|emb|CAK74719.1| unnamed protein product [Paramecium tetraurelia] Length = 1659 Score = 98.9 bits (245), Expect = 4e-19, Method: Composition-based stats. Identities = 32/205 (15%), Positives = 69/205 (33%), Gaps = 37/205 (18%) Query: 22 AFNSASKTV---KCLQLANG-AVYYDEEKHWKEVHDEKIKALEVIIEKA----------- 66 A N+AS + + N + + + + KI + ++E + Sbjct: 825 AANAASLNNLEIQLRKCCNHPFLIQEMQNDLSKGCQTKIDYINKLVESSGKMILLDKLLN 884 Query: 67 ----NAAPIIVAYHFNSDLARLQKAFPQGRTL----------DKDPCTIQEWNEG--KIP 110 +++ F L+ L++ + + I +N+ K Sbjct: 885 KFRSEGKKMLIFSQFTMMLSILEEYLKFKQVKYEKIDGQIKARERSNAIDRFNDPSKKRE 944 Query: 111 LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYL 170 + + G G+NL I+V + W+ + Q R + G + V VY L Sbjct: 945 VFLLSTKAGGQGINLT-AAEIVVIYDSDWNPQNDVQATAR-----AHRIGQSKEVTVYRL 998 Query: 171 IAQNTIDELVLQRLRTKSTIQDLLL 195 I ++T + + +R K + + Sbjct: 999 ITKDTYEAEMFERAIKKLGLDQAIF 1023 >gi|302697641|ref|XP_003038499.1| hypothetical protein SCHCODRAFT_72893 [Schizophyllum commune H4-8] gi|300112196|gb|EFJ03597.1| hypothetical protein SCHCODRAFT_72893 [Schizophyllum commune H4-8] Length = 1076 Score = 98.9 bits (245), Expect = 4e-19, Method: Composition-based stats. Identities = 37/229 (16%), Positives = 85/229 (37%), Gaps = 39/229 (17%) Query: 6 KFQRELYCDLQGENIEAFNSAS--------KTVKCLQL---ANGAVYYD--EEKHWKEVH 52 QR+ Y + ++I+A N + +QL +D E Sbjct: 422 DMQRKWYRSVLEKDIDAVNGLTGKKEGKTRLMNMVMQLRKVTCHPYLFDGAEPGPPYTTD 481 Query: 53 DE------KIKALEVIIEKAN--AAPIIVAYHFNSDLARLQK----------AFPQGRTL 94 + K+ L+ +++ + +++ + L L+ G Sbjct: 482 EHLVENCGKMLILDKLLKSMKEKGSRVLIFSQMSRMLDILEDYCLFRGYKYCRIDGGTAH 541 Query: 95 DKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIG 152 D I E+N+ + + G G+NL +I+V + W+ + Q ++R Sbjct: 542 DDRITAIDEYNKPDSDKFIFLLTTRAGGLGINLTT-ADIVVLYDSDWNPQADLQAMDR-- 598 Query: 153 VTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 + G + V+V+ I + +++E +L+R K + L++ +++ Sbjct: 599 ---AHRIGQTKQVYVFRFITEGSVEERMLERAAQKLRLDQLVIQQGRQQ 644 >gi|210075955|ref|XP_504989.2| YALI0F04356p [Yarrowia lipolytica] gi|199424920|emb|CAG77796.2| YALI0F04356p [Yarrowia lipolytica] Length = 1242 Score = 98.9 bits (245), Expect = 4e-19, Method: Composition-based stats. Identities = 32/213 (15%), Positives = 82/213 (38%), Gaps = 26/213 (12%) Query: 5 HKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYY-------DEEKHWKEVHDEKIK 57 + ++ L + +++ ++AN + K++ Sbjct: 955 EELAPDITEFLSTIAFDKISTSQTLANLRKVANSPYLVKFPWGEEEPVDERIISDSGKMR 1014 Query: 58 ALEVIIEK--ANAAPIIVAYHFNSDLARLQK----------AFPQGRTLDKDPCTIQEWN 105 + + + + ++V F+ L L + L++ I +N Sbjct: 1015 VFDQLAMELVSRKHKMLVFSQFSGTLDLLTEWCEFRHLPYCMLIGSMGLEERQEMIDAFN 1074 Query: 106 EGKIP-LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA 164 E P + + G G+NL ++++ F W+ ++ +Q I+R + G K+ Sbjct: 1075 EESGPSIFLITTRAGGTGINLTAADSVVI-FDSDWNPQQDKQAIDR-----SHRIGQKKP 1128 Query: 165 VFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 +Y LI+ NT++E++++ K + ++++ A Sbjct: 1129 CVIYRLISTNTMEEMLVRVASDKKRLDEMVIQA 1161 >gi|212546089|ref|XP_002153198.1| SNF2 family helicase/ATPase (Swr1), putative [Penicillium marneffei ATCC 18224] gi|210064718|gb|EEA18813.1| SNF2 family helicase/ATPase (Swr1), putative [Penicillium marneffei ATCC 18224] Length = 1644 Score = 98.9 bits (245), Expect = 4e-19, Method: Composition-based stats. Identities = 30/166 (18%), Positives = 68/166 (40%), Gaps = 19/166 (11%) Query: 44 EEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAF---------PQGR 92 +K + K++ L+ ++ + A ++ L L++ G Sbjct: 1326 PDKRLLQYDCGKLQQLDKLLRELQAGGHRALIFTQMTKMLDILEQFLNIHGHRYLRLDGT 1385 Query: 93 TLDKDPCTI--QEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 T + + + N+ +I S G G+NL G + ++F+ L W+ +Q +R Sbjct: 1386 TKVEQRQMLTDRFNNDNRILAFILSTRSGGLGINLT-GADCVIFYDLDWNPAMDKQCQDR 1444 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + G R V +Y +++ TI+ +L++ K + D+++ Sbjct: 1445 C-----HRIGQTRDVHIYRFVSEFTIESNILRKANQKRMLDDVVIQ 1485 >gi|295662396|ref|XP_002791752.1| DNA repair and recombination protein RAD26 [Paracoccidioides brasiliensis Pb01] gi|226279878|gb|EEH35444.1| DNA repair and recombination protein RAD26 [Paracoccidioides brasiliensis Pb01] Length = 1234 Score = 98.9 bits (245), Expect = 4e-19, Method: Composition-based stats. Identities = 31/168 (18%), Positives = 65/168 (38%), Gaps = 21/168 (12%) Query: 53 DEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQ-----------KAFPQGRTLDKDPC 99 K++ ++ ++E K ++ L L+ + + Sbjct: 765 SGKMQVVKALLELWKETGHKSLLFAQHRIMLDILERFIKSMTGFKYQRMDGNTPIKLRQS 824 Query: 100 TIQEWNE-GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQ 158 + E+N +I + G G+NL G + ++ + W+ Q ER + Sbjct: 825 LVDEFNNNPEIHIFLLTTKVGGLGVNLT-GADRVIIYDPDWNPSTDVQARERAW-----R 878 Query: 159 AGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL-NALKKETIHV 205 G KR V +Y L+ TI+E + R K + + +L + +++T H+ Sbjct: 879 LGQKREVTIYRLMTAGTIEEKIYHRQIFKQFLTNKILRDPKQRQTFHM 926 >gi|195387524|ref|XP_002052444.1| GJ21604 [Drosophila virilis] gi|194148901|gb|EDW64599.1| GJ21604 [Drosophila virilis] Length = 842 Score = 98.9 bits (245), Expect = 4e-19, Method: Composition-based stats. Identities = 28/149 (18%), Positives = 59/149 (39%), Gaps = 17/149 (11%) Query: 65 KANAAPIIVAYHFNSDLA------RLQKA----FPQGRTLDKDPCTIQEWN-EGKIPLLF 113 KA +++ F L R++K + + I ++N + I + Sbjct: 663 KAEGHRVLLFSQFTMMLDVVEEYLRIRKHGFCRLDGATAVKERQDLITDFNVDDNIFVFL 722 Query: 114 AHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQ 173 + G G+NL ++ + ++ +Q +R + G R V +Y LI++ Sbjct: 723 LSTKAGGVGINLTAADTCIIH-DIDFNPYNDKQAEDRC-----HRMGQSRPVTIYRLISE 776 Query: 174 NTIDELVLQRLRTKSTIQDLLLNALKKET 202 +TI+E +L K ++ + + K E Sbjct: 777 STIEEGILMAAEEKLKLEKDITSTEKGEV 805 >gi|125538184|gb|EAY84579.1| hypothetical protein OsI_05951 [Oryza sativa Indica Group] Length = 936 Score = 98.9 bits (245), Expect = 4e-19, Method: Composition-based stats. Identities = 44/258 (17%), Positives = 92/258 (35%), Gaps = 67/258 (25%) Query: 1 MKQYHKF-----QRELYCDLQGENIEAFNSASKTVK--------CLQLANGAVYYDEEKH 47 +K Y KF ++E+ ++ ++ S K + L+L + + E Sbjct: 604 LKLYDKFSNSNAKQEISTIVKENELDQSTSQPKATRHVFQALQYLLKLCSHPLLVTGESP 663 Query: 48 WKEV-------------------HDEKIKALEVIIEK---------------ANAAPIIV 73 + H K+ AL+ I+++ +++ Sbjct: 664 PDYLVDLLKEIGMGTGDELHDLHHSPKLVALQEILQECGIGSEISSPDASAAIGQHRVLI 723 Query: 74 AYHFNSDLARLQK-------------AFPQGRTLDKDPCTIQEWN-EGKIPLLFAHPASC 119 + L ++K +K ++ +N + I +L Sbjct: 724 FAQHKALLDIIEKDLFQSHMRSVTYLRLDGSVEPEKRFEIVKAFNSDPTIDVLLLTTHVG 783 Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 G GLNL + LVF W+ + Q ++R + G ++ V V+ LI + T++E Sbjct: 784 GLGLNLT-SADTLVFMEHDWNPMKDLQAMDR-----AHRLGQRKVVNVHRLIMRGTLEEK 837 Query: 180 VLQRLRTKSTIQDLLLNA 197 V+ R K ++ + ++NA Sbjct: 838 VMSLQRFKVSVANAVINA 855 >gi|189230031|ref|NP_001121509.1| RAD54 homolog B [Xenopus (Silurana) tropicalis] gi|183986491|gb|AAI66345.1| rad54b protein [Xenopus (Silurana) tropicalis] Length = 897 Score = 98.9 bits (245), Expect = 4e-19, Method: Composition-based stats. Identities = 29/173 (16%), Positives = 65/173 (37%), Gaps = 22/173 (12%) Query: 44 EEKHWKEVHDEKIKALEVII----EKANAAPIIVAYHFNSDLARLQK----------AFP 89 + E K+ L ++ E + + +++ ++ L LQ Sbjct: 614 DGAKISESESGKLLVLSNLLSRIRELSPSERVVLVSNYTQTLNILQDLCNQHGYSCTRLD 673 Query: 90 QGRTLDKDPCTIQEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQM 147 + + + +N + + G GLNL G + L+ + L W+ Q Sbjct: 674 GQTPVTQRQHIVDGFNSKYSTDFIFLLSSKAGGVGLNL-IGASHLILYDLDWNPANDIQA 732 Query: 148 IERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKK 200 + R+ + G + V +Y L+ +++E + QR +K + +++ KK Sbjct: 733 MARVW-----RDGQRHTVHIYRLLTTGSLEEKIYQRQISKQGLSGAVVDLTKK 780 >gi|124802575|ref|XP_001347516.1| Chromodomain-helicase-DNA-binding protein 1 homolog, putative [Plasmodium falciparum 3D7] gi|23495097|gb|AAN35429.1| Chromodomain-helicase-DNA-binding protein 1 homolog, putative [Plasmodium falciparum 3D7] Length = 3328 Score = 98.9 bits (245), Expect = 4e-19, Method: Composition-based stats. Identities = 30/181 (16%), Positives = 66/181 (36%), Gaps = 20/181 (11%) Query: 35 LANGAVYYDEEKHWKEVHDEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQ------- 85 L + DE K KI LE ++ + +++ L L Sbjct: 1594 LCAEPLDKDEYKERLVYSSGKICLLEKLLIRLKERGNRVLIFSQMVKMLNILSEYLTLRG 1653 Query: 86 ---KAFPQGRTLDKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWD 140 + T + + +N + + G G+NL + ++ + W+ Sbjct: 1654 FKHQRLDGTMTKEMRKKAMNHFNSKNSDDFVFLLSTKAGGLGINLT-SADTVIIYDSDWN 1712 Query: 141 LEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKK 200 + Q R + G + V +Y L+ +++I++ +L+R + K + L++ L K Sbjct: 1713 PQNDLQAGAR-----AHRIGQTKTVQIYRLVTKDSIEQTILERAKVKMVLDTLVVQGLNK 1767 Query: 201 E 201 + Sbjct: 1768 K 1768 >gi|68485787|ref|XP_713174.1| hypothetical protein CaO19.9427 [Candida albicans SC5314] gi|46434654|gb|EAK94057.1| hypothetical protein CaO19.9427 [Candida albicans SC5314] Length = 1641 Score = 98.9 bits (245), Expect = 4e-19, Method: Composition-based stats. Identities = 29/166 (17%), Positives = 72/166 (43%), Gaps = 19/166 (11%) Query: 44 EEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAF---------PQGR 92 +K + K++ L ++++ + ++ L L++ G Sbjct: 1356 PDKTLLQYDCGKLQKLATLLQELTSQGHRALIFTQMTKVLDILEQFLNIHGYRYMRLDGA 1415 Query: 93 TLDKDPCTI-QEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 T +D + +++N + KIP+ S G G+NL G + ++F+ W+ +Q +R Sbjct: 1416 TKIEDRQLLTEKFNRDPKIPVFILSTRSGGLGINLT-GADTVIFYDSDWNPAMDKQCQDR 1474 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + G R V +Y +++ TI+ ++++ K + ++++ Sbjct: 1475 C-----HRIGQVRDVHIYRFVSEYTIESNIIKKANQKRQLDNVVIQ 1515 >gi|324499672|gb|ADY39866.1| Helicase ssl-1 [Ascaris suum] Length = 2173 Score = 98.9 bits (245), Expect = 4e-19, Method: Composition-based stats. Identities = 30/155 (19%), Positives = 63/155 (40%), Gaps = 19/155 (12%) Query: 55 KIKALEVIIEKAN--AAPIIVAYHFNSDLARLQK----------AFPQGRTLDKDPCTIQ 102 K++ L ++ ++ + L LQ +++ ++ Sbjct: 1396 KLQVLSSLLRDLFLYKHRCLIFTQMSRMLDVLQAFLSFHGYQYFRLDGTTGIEQRQAMME 1455 Query: 103 EWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGF 161 +N + KI S G G+NL G + ++F+ W+ Q +R + G Sbjct: 1456 RFNSDPKIFCFILSTRSGGIGVNLT-GADTVIFYDSDWNPTMDAQAQDRC-----HRIGQ 1509 Query: 162 KRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 R V +Y LI++ TI+E +L++ K + +L ++ Sbjct: 1510 TRNVTIYRLISERTIEENILKKAMQKRRLGELAID 1544 >gi|324499612|gb|ADY39837.1| Helicase ssl-1 [Ascaris suum] Length = 2737 Score = 98.9 bits (245), Expect = 4e-19, Method: Composition-based stats. Identities = 30/155 (19%), Positives = 63/155 (40%), Gaps = 19/155 (12%) Query: 55 KIKALEVIIEKAN--AAPIIVAYHFNSDLARLQK----------AFPQGRTLDKDPCTIQ 102 K++ L ++ ++ + L LQ +++ ++ Sbjct: 1396 KLQVLSSLLRDLFLYKHRCLIFTQMSRMLDVLQAFLSFHGYQYFRLDGTTGIEQRQAMME 1455 Query: 103 EWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGF 161 +N + KI S G G+NL G + ++F+ W+ Q +R + G Sbjct: 1456 RFNSDPKIFCFILSTRSGGIGVNLT-GADTVIFYDSDWNPTMDAQAQDRC-----HRIGQ 1509 Query: 162 KRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 R V +Y LI++ TI+E +L++ K + +L ++ Sbjct: 1510 TRNVTIYRLISERTIEENILKKAMQKRRLGELAID 1544 >gi|313885386|ref|ZP_07819136.1| helicase C-terminal domain protein [Eremococcus coleocola ACS-139-V-Col8] gi|312619116|gb|EFR30555.1| helicase C-terminal domain protein [Eremococcus coleocola ACS-139-V-Col8] Length = 393 Score = 98.9 bits (245), Expect = 4e-19, Method: Composition-based stats. Identities = 40/199 (20%), Positives = 83/199 (41%), Gaps = 32/199 (16%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEV 61 K+Y +++ D + + N +S + AN ++K+K LE+ Sbjct: 208 KEYKVIEKDRVLDDKAYD----NPSSLLHGLREHAN--------------RNDKLKYLEM 249 Query: 62 IIEKANAAPIIVAYHFNSDLARLQKAFPQGRTL---DKDPCTI---QEWNEGKIPLLFAH 115 + E I++ Y + S+L +++ +G+ + + I +W++ L Sbjct: 250 LFE-GTDNNIVIFYQYTSELEAIKE-IAKGKIIFEVNGSKQAIPSKDKWDKVSNSLTLVQ 307 Query: 116 PASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNT 175 + G+ LQY NI+V+++ + +++ Q + R + G KR V V+ + T Sbjct: 308 YQAGAAGIELQY-ANIVVYYTPTYSYQDYAQSLGR-----THRNGQKRKVTVFRFNTEKT 361 Query: 176 IDELVLQRLRTKSTIQDLL 194 I++ V L K L Sbjct: 362 IEQAVWSALEKKKDFDKTL 380 >gi|321458928|gb|EFX69988.1| hypothetical protein DAPPUDRAFT_202549 [Daphnia pulex] Length = 621 Score = 98.9 bits (245), Expect = 4e-19, Method: Composition-based stats. Identities = 28/172 (16%), Positives = 66/172 (38%), Gaps = 21/172 (12%) Query: 41 YYDEEKHWKEVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQKAF---------P 89 Y +E K K+ ++ ++ + + +++ L L Sbjct: 371 YVVDESMVK--DSGKLTVMDQMLTRLIKDGHKVLIFSTLTMLLDVLADYLSMRDMKFCRL 428 Query: 90 QGR-TLDKDPCTIQEW-NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQM 147 GR L+ + + N+ + + G G+ L + ++ + W+ + Q Sbjct: 429 DGRMNLEDRATDMDTFRNDPDTSVFLISTRAGGLGITLT-SADTVIIYDSDWNPQCDLQA 487 Query: 148 IERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 +R + G + V VY L+A +T+D+ +++R K ++ L++ K Sbjct: 488 QDRC-----HRIGQTKPVVVYRLVAADTVDQRIIERAGAKRKLEKLVIQKGK 534 >gi|240278991|gb|EER42497.1| dsDNA-dependent ATPase [Ajellomyces capsulatus H143] gi|325090250|gb|EGC43560.1| dsDNA-dependent ATPase [Ajellomyces capsulatus H88] Length = 974 Score = 98.9 bits (245), Expect = 4e-19, Method: Composition-based stats. Identities = 34/167 (20%), Positives = 64/167 (38%), Gaps = 22/167 (13%) Query: 46 KHWKEVHDEKIKALEVI---IEKANAAPIIVAYHFNSDLARLQK----------AFPQGR 92 +H KI+ L+ + I + +++ ++ S L L Sbjct: 644 RHLSPASSGKIRVLDQLLHNIRHTTSEKVVLISNYTSTLDLLATFLTSLSLPFLRLDGST 703 Query: 93 TLDKDPCTIQEWN---EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIE 149 K + ++N + + G GLNL G + L+ F + W+ Q + Sbjct: 704 PPSKRQGLVDDFNRSSSSSVFAFLLSAKAGGTGLNL-IGASRLILFDVDWNPATDIQAMA 762 Query: 150 RIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 RI + G KR VY L+ + ++E + QR TK + D +++ Sbjct: 763 RI-----HRDGQKRHCRVYRLVLKGALEEKIWQRQVTKIGLADSVMD 804 >gi|225560239|gb|EEH08521.1| conserved hypothetical protein [Ajellomyces capsulatus G186AR] Length = 974 Score = 98.9 bits (245), Expect = 4e-19, Method: Composition-based stats. Identities = 34/167 (20%), Positives = 64/167 (38%), Gaps = 22/167 (13%) Query: 46 KHWKEVHDEKIKALEVI---IEKANAAPIIVAYHFNSDLARLQK----------AFPQGR 92 +H KI+ L+ + I + +++ ++ S L L Sbjct: 644 RHLSPASSGKIRVLDQLLHNIRHTTSEKVVLISNYTSTLDLLATFLTSLSLPFLRLDGST 703 Query: 93 TLDKDPCTIQEWN---EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIE 149 K + ++N + + G GLNL G + L+ F + W+ Q + Sbjct: 704 PPSKRQGLVDDFNRSSSSSVFAFLLSAKAGGTGLNL-IGASRLILFDVDWNPATDIQAMA 762 Query: 150 RIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 RI + G KR VY L+ + ++E + QR TK + D +++ Sbjct: 763 RI-----HRDGQKRHCRVYRLVLKGALEEKIWQRQVTKIGLADSVMD 804 >gi|238883647|gb|EEQ47285.1| helicase SWR1 [Candida albicans WO-1] Length = 1641 Score = 98.5 bits (244), Expect = 4e-19, Method: Composition-based stats. Identities = 29/166 (17%), Positives = 72/166 (43%), Gaps = 19/166 (11%) Query: 44 EEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAF---------PQGR 92 +K + K++ L ++++ + ++ L L++ G Sbjct: 1356 PDKTLLQYDCGKLQKLATLLQELTSQGHRALIFTQMTKVLDILEQFLNIHGYRYMRLDGA 1415 Query: 93 TLDKDPCTI-QEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 T +D + +++N + KIP+ S G G+NL G + ++F+ W+ +Q +R Sbjct: 1416 TKIEDRQLLTEKFNRDPKIPVFILSTRSGGLGINLT-GADTVIFYDSDWNPAMDKQCQDR 1474 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + G R V +Y +++ TI+ ++++ K + ++++ Sbjct: 1475 C-----HRIGQVRDVHIYRFVSEYTIESNIIKKANQKRQLDNVVIQ 1515 >gi|195430100|ref|XP_002063095.1| GK21565 [Drosophila willistoni] gi|194159180|gb|EDW74081.1| GK21565 [Drosophila willistoni] Length = 1026 Score = 98.5 bits (244), Expect = 4e-19, Method: Composition-based stats. Identities = 42/225 (18%), Positives = 88/225 (39%), Gaps = 37/225 (16%) Query: 6 KFQRELYCDLQGENIEAFNSASKTVK------CLQL---ANGAVYYD--------EEKHW 48 K QR+ Y + ++I+ N A K K +QL N +D Sbjct: 366 KMQRDWYTKVLLKDIDIVNGAGKVEKMRLQNILMQLRKCTNHPYLFDGAEPGPPYTTDTH 425 Query: 49 KEVHDEKIKALEVIIEKANAA--PIIVAYHFNSDLARLQ---------KAFPQGRTLDKD 97 + K+ L+ ++ K +++ L L+ G+T +D Sbjct: 426 LVYNSGKMAILDKLLPKLQEQESRVLIFSQMTRMLDILEDYCHWRNYNYCRLDGQTPHED 485 Query: 98 P-CTIQEWN--EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 IQE+N + + G G+NL ++++ + W+ + Q ++R Sbjct: 486 RNRQIQEYNMENSTKFIFMLSTRAGGLGINL-ATADVVIIYDSDWNPQMDLQAMDR---- 540 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 + G K+ V V+ LI ++T++E +++R K + +++ + Sbjct: 541 -AHRIGQKKQVRVFRLITESTVEEKIVERAEVKLRLDKMVIQGGR 584 >gi|320581785|gb|EFW96004.1| global transcription activator Snf2p [Pichia angusta DL-1] Length = 1461 Score = 98.5 bits (244), Expect = 4e-19, Method: Composition-based stats. Identities = 41/226 (18%), Positives = 80/226 (35%), Gaps = 34/226 (15%) Query: 2 KQYHKFQRELYCDLQGENIEA-FNSASKTVKCLQL---ANGA----VYYDEEKHWKEVHD 53 K YH+ + + + +A K +QL N D E +D Sbjct: 855 KLYHQMLKYNQLFIGDSDSKAPVGIKGMNNKLMQLRKICNHPYVFPAIEDMINPSHENND 914 Query: 54 E------KIKALEVIIE--KANAAPIIVAYHFNSDLARLQK----------AFPQGRTLD 95 K + L+ I+ +A+ +++ + + ++ D Sbjct: 915 TIWRVSGKFELLDRILPKFRASGHRVLMFFQMTQIMDIMEDFLRFRGMHYMRLDGDTRAD 974 Query: 96 KDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGV 153 ++++N P + + G GLNLQ + ++ F W+ + Q Sbjct: 975 DRTALLKDFNSEDSPYFVFLLSTRAGGLGLNLQT-ADTVIIFDTDWNPHQDLQA-----Q 1028 Query: 154 TRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 R + G K V + LI ++I+E +L+R K I ++ A K Sbjct: 1029 DRAHRIGQKNEVRILRLITSDSIEEYILERAHQKLDIDGKVIQAGK 1074 >gi|237725527|ref|ZP_04556008.1| SNF2 family helicase [Bacteroides sp. D4] gi|229436214|gb|EEO46291.1| SNF2 family helicase [Bacteroides dorei 5_1_36/D4] Length = 632 Score = 98.5 bits (244), Expect = 4e-19, Method: Composition-based stats. Identities = 35/165 (21%), Positives = 68/165 (41%), Gaps = 20/165 (12%) Query: 43 DEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFP----------QGR 92 D+ + + +E II + +IV + ++ P G Sbjct: 450 DDPSVVSVKYQRFCEIVEEIISR--KEKVIVFTSYKRMFEIFEEDIPVRFGIKIWSINGE 507 Query: 93 T-LDKDPCTIQEWNEGKIPLLFA-HPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 T ++ C + ++N P + +P + G GLN+ G N ++ ++L W+ Q R Sbjct: 508 TPIEDRQCIVDKFNHLDEPAMLVLNPRAAGTGLNIT-GANHIIHYNLEWNPSLEDQSSAR 566 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 + G ++ VFVY L +T++E+V +R+ K I + Sbjct: 567 -----AYRRGQEKTVFVYRLYYTDTVEEVVNERIERKRDIASYAI 606 >gi|62948072|gb|AAH94345.1| Btaf1 protein [Mus musculus] Length = 990 Score = 98.5 bits (244), Expect = 4e-19, Method: Composition-based stats. Identities = 33/145 (22%), Positives = 57/145 (39%), Gaps = 26/145 (17%) Query: 69 APIIVAYHFNSDLA-----------------RLQKAFPQGRTLDKDPCTIQEWNEGKIPL 111 I++ S L RL + P G+ + + N+ I + Sbjct: 786 HRILIFCQLKSMLDIVEHDLLKPHLPSVTYLRLDGSIPPGQ---RHSIVSRFNNDPSIDV 842 Query: 112 LFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLI 171 L G GLNL G + +VF W+ Q ++R + G KR V VY LI Sbjct: 843 LLLTTHVGGLGLNLT-GADTVVFVEHDWNPMRDLQAMDR-----AHRIGQKRVVNVYRLI 896 Query: 172 AQNTIDELVLQRLRTKSTIQDLLLN 196 + T++E ++ + K I + +++ Sbjct: 897 TRGTLEEKIMGLQKFKMNIANTVIS 921 >gi|325117906|emb|CBZ53457.1| hypothetical protein NCLIV_032440 [Neospora caninum Liverpool] Length = 713 Score = 98.5 bits (244), Expect = 4e-19, Method: Composition-based stats. Identities = 32/149 (21%), Positives = 62/149 (41%), Gaps = 19/149 (12%) Query: 61 VIIEKANAAPIIVAYHFNSDLA---RLQK------AFPQGRT-LDKDPCTIQEWNEGKIP 110 +I I++ ++ L R+ + G+T + K I ++N+ P Sbjct: 366 DVIRTTTNDKIVLISNYTQTLDLFDRMCRDCGYPVMRLDGQTSIKKRHAMITKFNDPMNP 425 Query: 111 ---LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFV 167 + + G G+NL G N LV F W+ +Q + R+ + G K+ ++ Sbjct: 426 QSFVFLLSSKAGGCGVNL-IGANRLVLFDPDWNPANDKQALARVW-----RDGQKKPCYI 479 Query: 168 YYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 Y + TI+E + QR K + +L++ Sbjct: 480 YRFFSTGTIEEKIYQRQICKDGLSAMLVS 508 >gi|242824408|ref|XP_002488252.1| SNF2 family helicase/ATPase (Swr1), putative [Talaromyces stipitatus ATCC 10500] gi|218713173|gb|EED12598.1| SNF2 family helicase/ATPase (Swr1), putative [Talaromyces stipitatus ATCC 10500] Length = 1663 Score = 98.5 bits (244), Expect = 4e-19, Method: Composition-based stats. Identities = 30/166 (18%), Positives = 68/166 (40%), Gaps = 19/166 (11%) Query: 44 EEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAF---------PQGR 92 +K + K++ L+ ++ + A ++ L L++ G Sbjct: 1342 PDKRLLQYDCGKLQQLDKLLRELQAGGHRALIFTQMTKMLDILEQFLNIHGHRYLRLDGT 1401 Query: 93 TLDKDPCTI--QEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 T + + + N+ +I S G G+NL G + ++F+ L W+ +Q +R Sbjct: 1402 TKVEQRQMLTDRFNNDNRILAFILSTRSGGLGINLT-GADSVIFYDLDWNPAMDKQCQDR 1460 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + G R V +Y +++ TI+ +L++ K + D+++ Sbjct: 1461 C-----HRIGQTRDVHIYRFVSEFTIESNILRKANQKRMLDDVVIQ 1501 >gi|68485880|ref|XP_713128.1| hypothetical protein CaO19.1871 [Candida albicans SC5314] gi|74679737|sp|Q59U81|SWR1_CANAL RecName: Full=Helicase SWR1 gi|46434607|gb|EAK94011.1| hypothetical protein CaO19.1871 [Candida albicans SC5314] Length = 1641 Score = 98.5 bits (244), Expect = 5e-19, Method: Composition-based stats. Identities = 29/166 (17%), Positives = 72/166 (43%), Gaps = 19/166 (11%) Query: 44 EEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAF---------PQGR 92 +K + K++ L ++++ + ++ L L++ G Sbjct: 1356 PDKTLLQYDCGKLQKLATLLQELTSQGHRALIFTQMTKVLDILEQFLNIHGYRYMRLDGA 1415 Query: 93 TLDKDPCTI-QEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 T +D + +++N + KIP+ S G G+NL G + ++F+ W+ +Q +R Sbjct: 1416 TKIEDRQLLTEKFNRDPKIPVFILSTRSGGLGINLT-GADTVIFYDSDWNPAMDKQCQDR 1474 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + G R V +Y +++ TI+ ++++ K + ++++ Sbjct: 1475 C-----HRIGQVRDVHIYRFVSEYTIESNIIKKANQKRQLDNVVIQ 1515 >gi|116214441|ref|XP_001230237.1| hypothetical protein CHGG_11061 [Chaetomium globosum CBS 148.51] gi|88175416|gb|EAQ82885.1| hypothetical protein CHGG_11061 [Chaetomium globosum CBS 148.51] Length = 2030 Score = 98.5 bits (244), Expect = 5e-19, Method: Composition-based stats. Identities = 30/166 (18%), Positives = 69/166 (41%), Gaps = 19/166 (11%) Query: 44 EEKHWKEVHDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAF---------PQGR 92 +K + K++ L+ ++ +A ++ L L++ G Sbjct: 1400 PDKRLLQYDCGKLQTLDKLLRRLQAGGHRALIFTQMTKVLDILEQFLNIHGHKYLRLDGA 1459 Query: 93 TLDKDPCTI-QEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 T + + +N + +I S G G+NL G + ++F+ W+ +Q +R Sbjct: 1460 TKVEQRQILTDRFNHDPRILCFILSTRSGGLGINLT-GADTVIFYDQDWNPAMDKQCQDR 1518 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + G R V +Y L++++TI+ +L++ K + D+++ Sbjct: 1519 C-----HRIGQTRDVHIYRLVSEHTIEANILRKAGQKQMLDDVVIQ 1559 >gi|189191134|ref|XP_001931906.1| chromodomain-helicase-DNA-binding protein 4 [Pyrenophora tritici-repentis Pt-1C-BFP] gi|187973512|gb|EDU41011.1| chromodomain-helicase-DNA-binding protein 4 [Pyrenophora tritici-repentis Pt-1C-BFP] Length = 1735 Score = 98.5 bits (244), Expect = 5e-19, Method: Composition-based stats. Identities = 34/214 (15%), Positives = 77/214 (35%), Gaps = 34/214 (15%) Query: 16 QGENIEAFNSASKTVKCLQL----ANGAVYYDEEKHWKEVH----------DEKIKALEV 61 + ++ A+ + +QL + VY E + +V K+ LE+ Sbjct: 989 SDKQLKQQERANLSNILMQLRKCLCHPFVYSREIEERSDVAAVSHRNLVEASAKLSLLEM 1048 Query: 62 IIEKAN--AAPIIVAYHFNSDLARLQKAFPQGRTLDKD----------PCTIQEWNEGKI 109 ++ K + +++ F L ++ + + I ++N Sbjct: 1049 LLPKLHERGHRVLIFSQFLDMLNIIEDFLDGMQLPYQRLDGTMGSLEKQKRIDQFNAPDS 1108 Query: 110 PLL--FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFV 167 PL + G G+NL + ++ W+ + Q I R + G K V Sbjct: 1109 PLFAFLLSTRAGGVGINL-ATADTVIILDPDWNPHQDLQAIAR-----AHRIGQKNKVLC 1162 Query: 168 YYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 L + +++E ++Q + K + +++ L +E Sbjct: 1163 LQLATRASVEEKIMQMGKKKMALDKVVVQDLDRE 1196 >gi|46122747|ref|XP_385927.1| hypothetical protein FG05751.1 [Gibberella zeae PH-1] gi|84029506|sp|Q4IAK7|SWR1_GIBZE RecName: Full=Helicase SWR1 Length = 1691 Score = 98.5 bits (244), Expect = 5e-19, Method: Composition-based stats. Identities = 30/166 (18%), Positives = 69/166 (41%), Gaps = 19/166 (11%) Query: 44 EEKHWKEVHDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAF---------PQGR 92 +K + K++ L+ ++ +A ++ L L++ G Sbjct: 1361 PDKRLLQYDCGKLQILDKLLRKLQAGGHRALIFTQMTKVLDILEQFLNIHGHKYLRLDGA 1420 Query: 93 TLDKDPCTI--QEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 T + + + N+ +I S G G+NL G + ++F+ W+ +Q +R Sbjct: 1421 TKVEQRQILTDRFNNDPRILCFILSTRSGGLGINLT-GADTVIFYDQDWNPAMDKQCQDR 1479 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + G R V +Y L++++TI+ +L++ K + D+++ Sbjct: 1480 C-----HRIGQTRDVHIYRLVSEHTIEANILRKASQKQMLDDVVIQ 1520 >gi|300122947|emb|CBK23954.2| unnamed protein product [Blastocystis hominis] Length = 787 Score = 98.5 bits (244), Expect = 5e-19, Method: Composition-based stats. Identities = 29/140 (20%), Positives = 51/140 (36%), Gaps = 17/140 (12%) Query: 67 NAAPIIVAYHFNSDLARLQK----------AFPQGRTLDKDPCTIQEWN-EGKIPLLFAH 115 +++ S L + K + K + +N + I L Sbjct: 578 EGHKVLIYTQTVSMLTIIMKYVEEQHFSYCMMDGSTPVVKRQALVDLFNSDPTIFLFLLT 637 Query: 116 PASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNT 175 G G+NL G + ++ F W+ Q ER + G +R V +Y LI T Sbjct: 638 TRVGGLGINL-VGADRVILFDPDWNPSVDIQARERCW-----RIGQQRPVTIYRLITSGT 691 Query: 176 IDELVLQRLRTKSTIQDLLL 195 I+E + R K+ + + +L Sbjct: 692 IEEKIYHRQIFKTVLSNRVL 711 >gi|293331535|ref|NP_001169906.1| hypothetical protein LOC100383801 [Zea mays] gi|224032283|gb|ACN35217.1| unknown [Zea mays] Length = 466 Score = 98.5 bits (244), Expect = 5e-19, Method: Composition-based stats. Identities = 39/160 (24%), Positives = 60/160 (37%), Gaps = 21/160 (13%) Query: 42 YDEEKHWKEVHDEKIKALEVIIEKANAA--PIIVAYHFNSDLARLQKAFPQGRTL----- 94 D + +WK K+K L ++E IV F S L+ F Q Sbjct: 290 VDAKNNWK--DSCKVKTLVTMLESLQRKQEKSIVFSQFTSFFDLLEIRFTQKGIKFLRFD 347 Query: 95 -----DKDPCTIQEWNEG-KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMI 148 ++E++E +L + G GLNL N+ + WW+ +Q I Sbjct: 348 GKLSQKHKEKVLKEFSESQDKLVLMMSLKAGGVGLNLTAASNVFMM-DPWWNPAVEEQAI 406 Query: 149 ERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKS 188 RI + G KR V V I + T++E + Q K Sbjct: 407 MRI-----HRIGQKREVRVKRFIVKGTVEERMQQVQMRKQ 441 >gi|224052438|ref|XP_002197654.1| PREDICTED: helicase, lymphoid-specific [Taeniopygia guttata] Length = 824 Score = 98.5 bits (244), Expect = 5e-19, Method: Composition-based stats. Identities = 27/157 (17%), Positives = 63/157 (40%), Gaps = 19/157 (12%) Query: 52 HDEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQ-----KAFPQGRT-----LDKDPC 99 + K L+ ++ + +++ L L + F R + Sbjct: 582 NSGKFLLLDRMLPELKKRGHKVLLFSQMTMMLDILMDYCYLRNFKFSRLDGSMSYSEREE 641 Query: 100 TIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQ 158 + ++N + ++ L + G G+NL + ++ + W+ + Q +R + Sbjct: 642 NMHQFNTDPEVFLFLVSTRAGGLGINLT-AADTVIIYDSDWNPQSDLQAQDRC-----HR 695 Query: 159 AGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 G + V VY L+ NTID+ +++R K ++ L++ Sbjct: 696 IGQTKPVVVYRLVTANTIDQKIVERAAAKRKLEKLII 732 >gi|34559250|gb|AAQ75381.1| global transcription activator Snf2p [Pichia angusta] Length = 1461 Score = 98.5 bits (244), Expect = 5e-19, Method: Composition-based stats. Identities = 41/226 (18%), Positives = 80/226 (35%), Gaps = 34/226 (15%) Query: 2 KQYHKFQRELYCDLQGENIEA-FNSASKTVKCLQL---ANGA----VYYDEEKHWKEVHD 53 K YH+ + + + +A K +QL N D E +D Sbjct: 855 KLYHQMLKYNQLFIGDSDSKAPVGIKGMNNKLMQLRKICNHPYVFPAIEDMINPSHENND 914 Query: 54 E------KIKALEVIIE--KANAAPIIVAYHFNSDLARLQK----------AFPQGRTLD 95 K + L+ I+ +A+ +++ + + ++ D Sbjct: 915 TIWRVSGKFELLDRILPKFRASGHRVLMFFQMTQIMDIMEDFLRFRGMHYMRLDGDTRAD 974 Query: 96 KDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGV 153 ++++N P + + G GLNLQ + ++ F W+ + Q Sbjct: 975 DRTALLKDFNSEDSPYFVFLLSTRAGGLGLNLQT-ADTVIIFDTDWNPHQDLQA-----Q 1028 Query: 154 TRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 R + G K V + LI ++I+E +L+R K I ++ A K Sbjct: 1029 DRAHRIGQKNEVRILRLITSDSIEEYILERAHQKLDIDGKVIQAGK 1074 >gi|328869586|gb|EGG17963.1| SNF2-related domain-containing protein [Dictyostelium fasciculatum] Length = 1429 Score = 98.5 bits (244), Expect = 5e-19, Method: Composition-based stats. Identities = 37/182 (20%), Positives = 76/182 (41%), Gaps = 32/182 (17%) Query: 35 LANGAVYYDEEKHWKEVHDEKI-KALEVIIEK---ANAAPIIVAYHFNSDLARLQK---- 86 +A G+ + D++ + K+ + L+ I E A I++ + S L R++ Sbjct: 1193 IAAGSEFIDDK------NSAKLTRMLDDINEAKRNDRDAKIVIFSQWTSMLNRVEMLLIE 1246 Query: 87 ----------AFPQGRTLDKDPCTIQEWN--EGKIPLLFAHPASCGHGLNLQYGGNILVF 134 + T + ++ + G+ +L + G GLNL +++V Sbjct: 1247 KNIMPTEHYLRYDGTMTPNAKRAAVETFQTTNGEPRILLISLKAGGVGLNLTRANHVIVL 1306 Query: 135 FSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 WW+ Q I+R+ + G + V+V + Q +I+E VL+ R K ++ + Sbjct: 1307 -DPWWNSSAEDQAIDRV-----HRIGQLKHVYVKKYVIQASIEERVLELQRAKESMTKAI 1360 Query: 195 LN 196 L+ Sbjct: 1361 LD 1362 >gi|330800380|ref|XP_003288215.1| hypothetical protein DICPUDRAFT_152429 [Dictyostelium purpureum] gi|325081785|gb|EGC35289.1| hypothetical protein DICPUDRAFT_152429 [Dictyostelium purpureum] Length = 1956 Score = 98.5 bits (244), Expect = 5e-19, Method: Composition-based stats. Identities = 29/150 (19%), Positives = 56/150 (37%), Gaps = 20/150 (13%) Query: 61 VIIEKANAAPIIVAYHFNSDLARLQK-------------AFPQGRTLDKDPCTIQEWN-E 106 I N +++ L ++ K + ++N + Sbjct: 1722 EISATTNQHRVLIFAQMKQMLDIVENELFKKHLPSITYLRMDGSTESMKRHTIVNQFNSD 1781 Query: 107 GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVF 166 I +L G GLNL G + ++F W+ + Q ++R + G K+ V Sbjct: 1782 PTIDVLLLTTHVGGLGLNLT-GADTVIFLEHDWNPMKDLQAMDR-----AHRIGQKKVVN 1835 Query: 167 VYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 VY LI T++E ++ + K I + ++N Sbjct: 1836 VYRLITTGTLEEKIMGLQKFKLNIANTVIN 1865 >gi|224046507|ref|XP_002200063.1| PREDICTED: RAD54 homolog B [Taeniopygia guttata] Length = 919 Score = 98.5 bits (244), Expect = 5e-19, Method: Composition-based stats. Identities = 31/172 (18%), Positives = 66/172 (38%), Gaps = 23/172 (13%) Query: 50 EVHDEKIKALEVIIEKANA----APIIVAYHFNSDLARLQK----------AFPQGRTLD 95 E K++ L ++ + +++ ++ L LQ + Sbjct: 644 ETDSGKLQVLVKLLAAIHELNSSERVVLVSNYTQTLNVLQDVCKHYGYSYTRLDGHTPVS 703 Query: 96 KDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGV 153 + + +N P + + G GLNL G + L+ + + W+ Q + R+ Sbjct: 704 QRQHIVDTFNSKFSPAFIFLLSSKAGGVGLNL-VGASHLILYDIDWNPATDIQAMARVW- 761 Query: 154 TRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK-KETIH 204 + G K +V +Y L+ +I+E + QR +K + +++ K E H Sbjct: 762 ----RDGQKHSVHIYRLLTTGSIEEKIYQRQISKQDLSGAVVDLSKTSEHTH 809 >gi|28317220|gb|AAO39617.1| GH12153p [Drosophila melanogaster] Length = 1221 Score = 98.5 bits (244), Expect = 5e-19, Method: Composition-based stats. Identities = 34/188 (18%), Positives = 72/188 (38%), Gaps = 34/188 (18%) Query: 33 LQLANGAVYYDEEKHWKEVHDEKIKALEVII---------EKANAAPIIVAYHFNSDLAR 83 QLA D+ +H K+ AL+ ++ E + ++ + L Sbjct: 972 SQLALSNSSLDDIEH-----SAKLPALKQLLLDCGIGVQTESVSQHRALIFCQLKAMLDI 1026 Query: 84 LQK-------------AFPQGRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGG 129 +++ + + +N + I +L G GLNL G Sbjct: 1027 VEQDLLRRHLPSVTYLRLDGSVPASQRQDIVNNFNSDPSIDVLLLTTMVGGLGLNLT-GA 1085 Query: 130 NILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKST 189 + ++F W+ + Q ++R + G K+ V VY LI +N+++E ++ + K Sbjct: 1086 DTVIFVEHDWNPMKDLQAMDR-----AHRIGQKKVVNVYRLITRNSLEEKIMGLQKFKIL 1140 Query: 190 IQDLLLNA 197 + +++A Sbjct: 1141 TANTVVSA 1148 >gi|168705379|ref|ZP_02737656.1| swi/snf family helicase_2 [Gemmata obscuriglobus UQM 2246] Length = 612 Score = 98.5 bits (244), Expect = 5e-19, Method: Composition-based stats. Identities = 38/205 (18%), Positives = 71/205 (34%), Gaps = 23/205 (11%) Query: 2 KQYHKFQRELYCDLQ--GENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKAL 59 Y + + + L G+ I + ++ Q+ N E ++ + + Sbjct: 389 AAYVRAENDGVIQLNALGDTITVQHVFQLVMRLKQICNFDPLTGESAKLVQL----LSDM 444 Query: 60 EVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLD---------KDPCTIQEWNEGKIP 110 E + E I+ + L L KA + L + P + ++ Sbjct: 445 EEVAES--GRKAIIFSQWVEPLEVLAKALAKYGPLQYHGKIPQPQRTPILDRFKSDPSAH 502 Query: 111 LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYL 170 +L + GLNLQ+ N + F WW+ Q I R + G K V V Sbjct: 503 VLLMSYGTGSVGLNLQF-TNYVFLFDRWWNPAIEDQAINR-----AHRLGQKHPVTVTRF 556 Query: 171 IAQNTIDELVLQRLRTKSTIQDLLL 195 ++ TI+ + L K + + L+ Sbjct: 557 LSGGTIEGRIADILDAKRKVFNDLI 581 >gi|91088413|ref|XP_966659.1| PREDICTED: similar to TATA-binding protein-associated factor 172 [Tribolium castaneum] gi|270011757|gb|EFA08205.1| hypothetical protein TcasGA2_TC005832 [Tribolium castaneum] Length = 1810 Score = 98.5 bits (244), Expect = 5e-19, Method: Composition-based stats. Identities = 33/186 (17%), Positives = 68/186 (36%), Gaps = 34/186 (18%) Query: 40 VYYDEEKHWKEVHDEKIKALEVIIEK--------------ANAAPIIVAYHFNSDLARL- 84 + + K H K+ AL+ +++ N +V + L + Sbjct: 1564 LQTQDSKLDDISHSAKLPALKQLLQDCGIGVTEPQSTELVVNQHRALVFCQLKAMLDIIE 1623 Query: 85 ----QKAFPQGRTL---------DKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNI 131 +K P L + + N+ I +L G GLNL G + Sbjct: 1624 KDLFKKHMPGVTYLRLDGSIPPSQRHSVVTRFNNDPSIDVLLLTTQVGGLGLNLT-GADT 1682 Query: 132 LVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQ 191 ++F W+ + Q ++R + G ++ V VY LI + T++E ++ + K Sbjct: 1683 VIFVEHDWNPMKDLQAMDR-----AHRIGQRKVVNVYRLITRATLEEKIMGLQKFKVQTV 1737 Query: 192 DLLLNA 197 + +++ Sbjct: 1738 NTIISG 1743 >gi|299741616|ref|XP_001831930.2| transcription activator snf2l1 [Coprinopsis cinerea okayama7#130] gi|298404796|gb|EAU89829.2| transcription activator snf2l1 [Coprinopsis cinerea okayama7#130] Length = 1102 Score = 98.5 bits (244), Expect = 5e-19, Method: Composition-based stats. Identities = 38/231 (16%), Positives = 87/231 (37%), Gaps = 43/231 (18%) Query: 6 KFQRELYCDLQGENIEAFNSAS--------KTVKCLQL---AN----------GAVYYDE 44 + QR+ Y + ++I+A N + +QL G Y + Sbjct: 384 EMQRKWYRSVLEKDIDAVNGLTGKKEGKTRLMNIVMQLRKVTCHPYLFDGAEPGPPYTTD 443 Query: 45 EKHWKEVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQK----------AFPQGR 92 E + + K+ L+ +++ + +++ + L L+ G Sbjct: 444 EHLIQ--NSGKMVILDKLLKMMYQKGSRVLIFSQMSRVLDILEDYCLFRGYKYCRIDGGT 501 Query: 93 TLDKDPCTIQEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 + I E+N+ + + G G+NL +I+V + W+ + Q ++R Sbjct: 502 AHEDRIAAIDEYNKPGSDKFIFLLTTRAGGLGINLTT-ADIVVLYDSDWNPQADLQAMDR 560 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 + G + V+VY I + +++E +L+R K + L++ + + Sbjct: 561 -----AHRIGQTKQVYVYRFITEGSVEERMLERAAQKLRLDQLVIQQGRAQ 606 >gi|224116170|ref|XP_002317230.1| chromatin remodeling complex subunit [Populus trichocarpa] gi|222860295|gb|EEE97842.1| chromatin remodeling complex subunit [Populus trichocarpa] Length = 800 Score = 98.5 bits (244), Expect = 5e-19, Method: Composition-based stats. Identities = 38/165 (23%), Positives = 63/165 (38%), Gaps = 19/165 (11%) Query: 37 NGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFP----QGR 92 N A Y V D K I KA IV + L L+ Q R Sbjct: 616 NVACYDTSSGSRDSVKDGMDKRCLPI--KAVGEKAIVFSQWTGMLDLLEACLKNSSIQYR 673 Query: 93 TLDKD------PCTIQEWNE-GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQ 145 LD ++++N ++ ++ + GLN+ ++L+ LWW+ Sbjct: 674 RLDGTMSVTARDKAVKDFNTLPEVSVMIMSLKAASLGLNMVAACHVLLL-DLWWNPTTED 732 Query: 146 QMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 Q I+R + G RAV V L +NT+++ +L + K + Sbjct: 733 QAIDR-----AHRIGQTRAVTVLRLTVKNTVEDRILALQQKKREM 772 >gi|68477713|ref|XP_717169.1| hypothetical protein CaO19.5367 [Candida albicans SC5314] gi|68477876|ref|XP_717090.1| hypothetical protein CaO19.12827 [Candida albicans SC5314] gi|46438788|gb|EAK98114.1| hypothetical protein CaO19.12827 [Candida albicans SC5314] gi|46438870|gb|EAK98195.1| hypothetical protein CaO19.5367 [Candida albicans SC5314] Length = 796 Score = 98.5 bits (244), Expect = 5e-19, Method: Composition-based stats. Identities = 35/166 (21%), Positives = 64/166 (38%), Gaps = 19/166 (11%) Query: 44 EEKHWKEVHDEKIKAL-EVIIE-KANAAPIIVAYHFNSDLARLQKAFPQGRTL------- 94 EEK + KI L +++E + I++ ++ L L++ + Sbjct: 507 EEKFNLGMASGKINILVPLLLEIASLGEKIVLISNYTKTLDLLEQVLRKVSLTFSRLDGS 566 Query: 95 ---DKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 + + ++N I + S G G+NL G + L+ F W+ Q + R Sbjct: 567 TPNNVRSKLVNQFNTNPDINVFLLSSKSGGMGINL-VGASRLILFDNDWNPATDLQSMSR 625 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 I + G + F+Y L IDE + QR K+ + L+ Sbjct: 626 I-----HRDGQLKPCFIYRLFTTGCIDEKIFQRQLVKNKLSSKFLD 666 >gi|327539289|gb|EGF25911.1| Non-specific serine/threonine protein kinase [Rhodopirellula baltica WH47] Length = 647 Score = 98.5 bits (244), Expect = 5e-19, Method: Composition-based stats. Identities = 38/207 (18%), Positives = 79/207 (38%), Gaps = 27/207 (13%) Query: 2 KQYHKFQRELYCDLQG--ENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKAL 59 +Y ++E L+ E++ + ++ Q+ N K++ L Sbjct: 408 ARYETAEKEGVVHLEELEESLTVQHVFELVLRLKQICNF--------DPVTNSSAKLQRL 459 Query: 60 EVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTL--------DKDPCTIQEW-NEGK 108 E +E+ A+ I+ + + +++ + L K I+++ N+ Sbjct: 460 EADMEEVAASGQKAILFSQWTKTIDKMRPTLERFGPLEYHGKIPHKKREGVIEQFKNDPN 519 Query: 109 IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVY 168 ++ + GLNLQ+ + F WW+ Q I R + G +V V Sbjct: 520 SHIILMSYGAGSVGLNLQF-CRYVFLFDRWWNPAIEDQAINR-----AHRIGAAGSVTVS 573 Query: 169 YLIAQNTIDELVLQRLRTKSTIQDLLL 195 ++A NTI++ + L K + D+L Sbjct: 574 RMMAVNTIEQRIAAVLDQKREMFDMLF 600 >gi|320587503|gb|EFW99983.1| helicase swr1 [Grosmannia clavigera kw1407] Length = 1751 Score = 98.5 bits (244), Expect = 5e-19, Method: Composition-based stats. Identities = 29/166 (17%), Positives = 69/166 (41%), Gaps = 19/166 (11%) Query: 44 EEKHWKEVHDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQK----------AFPQG 91 +K + K++AL+ ++ +A ++ L L++ Sbjct: 1406 PDKRLLQYDCGKLQALDRLLRRLQAGGHRALIFTQMTKVLDILEQFLNIHGHKYLRLDGA 1465 Query: 92 RTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 +++ +N + +I S G G+NL G + ++F+ W+ +Q +R Sbjct: 1466 TKIEQRQILTDRFNHDSRILCFILSTRSGGLGINLT-GADTVIFYDQDWNPAMDKQCQDR 1524 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + G R V +Y L++++TI+ +L++ K + D+++ Sbjct: 1525 C-----HRIGQTRDVHIYRLVSEHTIEANILRKASQKQMLDDVVIQ 1565 >gi|255724726|ref|XP_002547292.1| TATA-binding protein associated factor MOT1 [Candida tropicalis MYA-3404] gi|240135183|gb|EER34737.1| TATA-binding protein associated factor MOT1 [Candida tropicalis MYA-3404] Length = 648 Score = 98.5 bits (244), Expect = 5e-19, Method: Composition-based stats. Identities = 41/169 (24%), Positives = 72/169 (42%), Gaps = 24/169 (14%) Query: 42 YDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLA-----RLQKAFP------- 89 D K K+ + + I A E +I + ++ L L+K P Sbjct: 393 SDYNKSTKKKNQQLISA-EGVISQ---HRALIFCQLKDMLDMVENDLLRKYLPSVTFMRL 448 Query: 90 QGRTLDKDPCTI-QEWNE-GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQM 147 G T +D +I +++NE I +L G GLNL G + ++F W+ Q Sbjct: 449 DGSTDPRDRQSIVRKFNEDPSIDVLLLTTKVGGLGLNLT-GADTVIFVEHDWNPMNDLQA 507 Query: 148 IERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 ++R + G K+ V VY LI ++T++E ++ + K I ++N Sbjct: 508 MDR-----AHRLGQKKVVNVYRLITKDTLEEKIMGLQKFKMNIASTIVN 551 >gi|255071433|ref|XP_002499390.1| SNF2 super family [Micromonas sp. RCC299] gi|226514653|gb|ACO60649.1| SNF2 super family [Micromonas sp. RCC299] Length = 865 Score = 98.5 bits (244), Expect = 5e-19, Method: Composition-based stats. Identities = 27/163 (16%), Positives = 57/163 (34%), Gaps = 27/163 (16%) Query: 52 HDEKIKAL-----EVIIEKANA---APIIVAYHFNSDLARLQKAFPQGRTL--------- 94 K +AL + + + A +V F + + QK+ Sbjct: 681 PSAKTEALVARLKTDLRARGDGGRKAKAVVFSQFVTFIDIAQKSVEAAGFKCVRLTGGVS 740 Query: 95 -DKDPCTIQEWNEGKIP---LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 I+E+ ++F + G G+NL + + WW+ Q ++R Sbjct: 741 AAGREKCIREFQSPDADSPDVIFVSLKAGGVGINLT-AASFVYMLDPWWNPATEDQAMDR 799 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDL 193 + + G R V V + +++IDE +++ + K + Sbjct: 800 V-----HRLGQDRPVKVVRFVCKDSIDEKMMELQQRKRELAKA 837 >gi|32477129|ref|NP_870123.1| SWF/SNF family helicase [Rhodopirellula baltica SH 1] gi|32447677|emb|CAD79278.1| swi/snf family helicase_2 [Rhodopirellula baltica SH 1] Length = 647 Score = 98.5 bits (244), Expect = 5e-19, Method: Composition-based stats. Identities = 38/207 (18%), Positives = 79/207 (38%), Gaps = 27/207 (13%) Query: 2 KQYHKFQRELYCDLQG--ENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKAL 59 +Y ++E L+ E++ + ++ Q+ N K++ L Sbjct: 408 ARYETAEKEGVVHLEELEESLTVQHVFELVLRLKQICNF--------DPVTNSSAKLQRL 459 Query: 60 EVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTL--------DKDPCTIQEW-NEGK 108 E +E+ A+ I+ + + +++ + L K I+++ N+ Sbjct: 460 EADMEEVAASGQKAILFSQWTKTIDKMRPTLERFGPLEYHGKIPHKKREGVIEQFKNDPN 519 Query: 109 IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVY 168 ++ + GLNLQ+ + F WW+ Q I R + G +V V Sbjct: 520 SHIILMSYGAGSVGLNLQF-CRYVFLFDRWWNPAIEDQAINR-----AHRIGAAGSVTVS 573 Query: 169 YLIAQNTIDELVLQRLRTKSTIQDLLL 195 ++A NTI++ + L K + D+L Sbjct: 574 RMMAVNTIEQRIAAVLDQKREMFDMLF 600 >gi|302828188|ref|XP_002945661.1| hypothetical protein VOLCADRAFT_115608 [Volvox carteri f. nagariensis] gi|300268476|gb|EFJ52656.1| hypothetical protein VOLCADRAFT_115608 [Volvox carteri f. nagariensis] Length = 935 Score = 98.5 bits (244), Expect = 5e-19, Method: Composition-based stats. Identities = 31/170 (18%), Positives = 60/170 (35%), Gaps = 29/170 (17%) Query: 50 EVHDEKIKALEVIIEKA--------NAAPI--IVAYHFNSDLARLQKAFPQGRTL----- 94 E K+ AL + A + PI +V F L + +A Sbjct: 751 EGASAKVAALMAALRSAAAQQPMYGSGGPIKSVVFSQFTGMLNLVGRALEAAGMRYVRLD 810 Query: 95 -----DKDPCTIQEW--NEGKIPL-LFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 ++++ E P+ + G G+NL + + WW+ +Q Sbjct: 811 GCTPAKARADMVRDFARREPDSPVVFLVSLKAGGVGMNLT-AASHVHLLDPWWNPSVEEQ 869 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 ++R+ + G R V V+ +A +TI+E +L K + + + Sbjct: 870 AMDRV-----HRLGQTRDVEVFRYVAADTIEERMLLLQERKRELANAAFD 914 >gi|71022805|ref|XP_761632.1| hypothetical protein UM05485.1 [Ustilago maydis 521] gi|74699657|sp|Q4P328|SWR1_USTMA RecName: Full=Helicase SWR1 gi|46101185|gb|EAK86418.1| hypothetical protein UM05485.1 [Ustilago maydis 521] Length = 1830 Score = 98.5 bits (244), Expect = 5e-19, Method: Composition-based stats. Identities = 29/155 (18%), Positives = 68/155 (43%), Gaps = 19/155 (12%) Query: 55 KIKALEVIIEKA--NAAPIIVAYHFNSDLARL---------QKAFPQGRTLDKDPCTI-Q 102 K++ L++++ + I++ L L + G T + + + Sbjct: 1534 KLQQLDILMRRLKEGGHRILIFTQMTRVLDILESFLNYHGYRYLRLDGATKVESRQALTE 1593 Query: 103 EWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGF 161 ++N + +I S G G+NL G + ++F+ L W+ Q ++R + G Sbjct: 1594 QFNRDARISAFILSTRSGGLGINLT-GADTVLFYDLDWNAAIEAQCMDR-----AHRIGQ 1647 Query: 162 KRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 R V +Y + ++TI+E +L++ K + ++++ Sbjct: 1648 TRDVHIYRFVTEHTIEENMLRKANQKRLLDNVVIQ 1682 >gi|242045780|ref|XP_002460761.1| hypothetical protein SORBIDRAFT_02g034440 [Sorghum bicolor] gi|241924138|gb|EER97282.1| hypothetical protein SORBIDRAFT_02g034440 [Sorghum bicolor] Length = 857 Score = 98.5 bits (244), Expect = 5e-19, Method: Composition-based stats. Identities = 38/207 (18%), Positives = 69/207 (33%), Gaps = 32/207 (15%) Query: 19 NIEAFNSASKTVKCLQLA----NGAVYYDEEKHWKEVHDEKIKALEV----IIEKANAAP 70 ++ A NSA K Q + KI AL +IE +A Sbjct: 650 DLTAQNSA---GKVTQSVKGRKCSGILSRLPSLVDFKTSTKIDALREEIRNMIEHDGSAK 706 Query: 71 IIVAYHFNSDLARLQKAFPQGRT----------LDKDPCTIQEW-NEGKIPLLFAHPASC 119 IV F S L +Q + + + + I + + + + Sbjct: 707 GIVFSQFTSFLDLIQFSLEKSGIKCVQLNGAMNITEKGRAIDTFTRDPDCRIFLMSLKAG 766 Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 G LNL + + WW+ Q +RI + G + + + +T++E Sbjct: 767 GVALNLTVASH-VFLMDPWWNPAVESQAQDRI-----HRIGQFKPIKSTRFVIGDTVEER 820 Query: 180 VLQRLRTKSTIQDLLL----NALKKET 202 +LQ K + + + +A+ K T Sbjct: 821 ILQLQEKKHLVFEGTVGDSPDAMSKLT 847 >gi|297741293|emb|CBI32424.3| unnamed protein product [Vitis vinifera] Length = 1112 Score = 98.5 bits (244), Expect = 5e-19, Method: Composition-based stats. Identities = 37/176 (21%), Positives = 75/176 (42%), Gaps = 23/176 (13%) Query: 45 EKHWKEVHDEKIKALEVIIE---KANAAPIIVAYHFNSDLARL-----QKAFPQGRT--- 93 E W E+ K+ L ++ + I++ ++ L ++ +P R Sbjct: 706 EGIWVEL-SGKMHVLARLLAHLRQKTDDRIVLVSNYTQTLDLFAQLCRERRYPYLRLDGT 764 Query: 94 --LDKDPCTIQEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIE 149 ++K + +++ + + G GLNL GGN LV F W+ +Q Sbjct: 765 TSINKRQKLVNRFSDPLKDEFVFLLSSKAGGCGLNL-IGGNRLVLFDPDWNPANDKQAAA 823 Query: 150 RIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIHV 205 R+ + G K+ V++Y ++ TI+E V QR +K +Q ++ +K+++ Sbjct: 824 RVW-----RDGQKKRVYIYRFLSTGTIEEKVFQRQMSKEGLQK-VIQQEQKDSLKT 873 >gi|225428788|ref|XP_002282100.1| PREDICTED: hypothetical protein [Vitis vinifera] Length = 912 Score = 98.5 bits (244), Expect = 5e-19, Method: Composition-based stats. Identities = 37/176 (21%), Positives = 75/176 (42%), Gaps = 23/176 (13%) Query: 45 EKHWKEVHDEKIKALEVIIE---KANAAPIIVAYHFNSDLARL-----QKAFPQGRT--- 93 E W E+ K+ L ++ + I++ ++ L ++ +P R Sbjct: 528 EGIWVEL-SGKMHVLARLLAHLRQKTDDRIVLVSNYTQTLDLFAQLCRERRYPYLRLDGT 586 Query: 94 --LDKDPCTIQEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIE 149 ++K + +++ + + G GLNL GGN LV F W+ +Q Sbjct: 587 TSINKRQKLVNRFSDPLKDEFVFLLSSKAGGCGLNL-IGGNRLVLFDPDWNPANDKQAAA 645 Query: 150 RIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIHV 205 R+ + G K+ V++Y ++ TI+E V QR +K +Q ++ +K+++ Sbjct: 646 RVW-----RDGQKKRVYIYRFLSTGTIEEKVFQRQMSKEGLQK-VIQQEQKDSLKT 695 >gi|326428031|gb|EGD73601.1| SNF2 family DNA-dependent ATPase [Salpingoeca sp. ATCC 50818] Length = 2192 Score = 98.5 bits (244), Expect = 5e-19, Method: Composition-based stats. Identities = 39/176 (22%), Positives = 67/176 (38%), Gaps = 26/176 (14%) Query: 35 LANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQ-KAFPQG-- 91 NG + +H + ++ L+ A + +++ N L + F QG Sbjct: 384 FTNGPHLWQSSGKMIILH-KLLQKLK-----AQGSRVLIFSQMNRMLDLIHDYCFSQGYK 437 Query: 92 --------RTLDKDPCTIQEWNEGKIPLL--FAHPASCGHGLNLQYGGNILVFFSLWWDL 141 LD+ I+ + E + + G GLNL + ++ + W+ Sbjct: 438 VCQIDGSMNALDRQEA-IERFQEDDSDVFAFLLSTRAGGLGLNLTK-ADAVILYDSDWNP 495 Query: 142 EEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 Q I+R + G +AV VY LI NT+DE + QR K + L+L Sbjct: 496 FADIQAIDR-----AHRIGQTKAVKVYRLITDNTVDEHIQQRAEAKLYLNALILQG 546 >gi|281211032|gb|EFA85198.1| SNF2-related domain-containing protein [Polysphondylium pallidum PN500] Length = 1376 Score = 98.5 bits (244), Expect = 5e-19, Method: Composition-based stats. Identities = 32/156 (20%), Positives = 62/156 (39%), Gaps = 19/156 (12%) Query: 53 DEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAFP----QGRTLDKD------PCT 100 K+K ++ I+ + +++ L +++ Q R +D Sbjct: 912 SSKLKVVQEILPMWQQQGHKVLLFCQTRQMLDIVEEFIKNSNYQYRRMDGTTSIKVRQTL 971 Query: 101 IQEWNEGKI-PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQA 159 ++E+N I + G G+NL G N ++ F W+ Q ER+ + Sbjct: 972 VEEFNNDPILFIFLLTTKVGGLGINLT-GANRVILFDPDWNPSTDIQARERV-----YRI 1025 Query: 160 GFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 G K+ V +Y L+ TI+E + R K + + +L Sbjct: 1026 GQKKTVTIYRLMTTGTIEEKIYHRQIYKQFLSNKIL 1061 >gi|226290524|gb|EEH46008.1| helicase [Paracoccidioides brasiliensis Pb18] Length = 857 Score = 98.5 bits (244), Expect = 5e-19, Method: Composition-based stats. Identities = 25/146 (17%), Positives = 55/146 (37%), Gaps = 18/146 (12%) Query: 66 ANAAPIIVAYHFNSDLARLQK-----------AFPQGRTLDKDPCTIQEWN-EGKIPLLF 113 + I++ F + L LQ + I +N + + Sbjct: 622 SKNHKILIFSQFKTQLDILQDYAVYLRGWNCCRIDGAVSQADRQAQIAAFNTDPNYRIFL 681 Query: 114 AHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQ 173 + G G+NL + ++ F W+ ++ Q R + G + V VY L + Sbjct: 682 LSTRAGGQGINLT-AADTVILFDSDWNPQQDLQA-----QDRAHRIGQTKPVIVYRLATR 735 Query: 174 NTIDELVLQRLRTKSTIQDLLLNALK 199 T+++ +L++ +K ++ L++ K Sbjct: 736 GTVEQTLLEKADSKRKLEKLVIQKGK 761 >gi|71754507|ref|XP_828168.1| DNA repair protein [Trypanosoma brucei TREU927] gi|70833554|gb|EAN79056.1| DNA repair protein, putative [Trypanosoma brucei] Length = 984 Score = 98.5 bits (244), Expect = 5e-19, Method: Composition-based stats. Identities = 29/164 (17%), Positives = 58/164 (35%), Gaps = 18/164 (10%) Query: 46 KHWKEVHDEKIKALEV-IIEKANAAPIIVAYHFNSDLARLQ----------KAFPQGRTL 94 K + K+ A+ I +IV F L +Q L Sbjct: 808 DSSKPLRGTKLDAITEYICSIPEEEKVIVFSQFGDTLDLIQLWLQKVKVKTVKLVGSLML 867 Query: 95 DKDPCTIQEW-NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGV 153 + ++ + ++ + + + G GLNLQ N +V WW+ Q +R Sbjct: 868 SQRQAVLRAFLHDKSVRAILISLKAGGEGLNLQI-ANHVVLVDPWWNPAVEMQAAQR--- 923 Query: 154 TRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + G R V V + + +++E +L+ K + + ++ Sbjct: 924 --AHRIGQTRPVRVVRFVTERSVEERMLELQEKKMLVIEGTIDG 965 >gi|195033465|ref|XP_001988689.1| GH10438 [Drosophila grimshawi] gi|193904689|gb|EDW03556.1| GH10438 [Drosophila grimshawi] Length = 843 Score = 98.5 bits (244), Expect = 5e-19, Method: Composition-based stats. Identities = 30/164 (18%), Positives = 68/164 (41%), Gaps = 19/164 (11%) Query: 52 HDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFP---------QGRTLDKDPCT 100 K + ++ ++ K A+ +++ F L +++ G T K+ Sbjct: 649 DSGKFQFMDDLLPKLKADGHRVLLFSQFTMMLDVVEEYLKIRKHGFCRLDGGTAVKERQD 708 Query: 101 -IQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQ 158 I ++N + I + + G G+NL ++ + ++ +Q +R + Sbjct: 709 LITDFNVDDNIFVFLLSTKAGGVGINLTAADTCIIH-DIDFNPYNDKQAEDRC-----HR 762 Query: 159 AGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKET 202 G R V +Y LI+++TI+E +L K +++ + + K E Sbjct: 763 MGQSRPVSIYRLISESTIEEGILMAAEEKLKLEENITSIEKGEV 806 >gi|88603125|ref|YP_503303.1| SNF2-like protein [Methanospirillum hungatei JF-1] gi|88188587|gb|ABD41584.1| SNF2-related protein [Methanospirillum hungatei JF-1] Length = 886 Score = 98.5 bits (244), Expect = 5e-19, Method: Composition-based stats. Identities = 41/226 (18%), Positives = 80/226 (35%), Gaps = 41/226 (18%) Query: 5 HKFQRELYCDLQGENIEAFNSASK---------------------TVKCLQLANGAVYYD 43 K + ++C L E + + + + Q+ N + Sbjct: 635 EKMESRVFCTLTHEQATLYQAVVEDMAQSLETVTGLARRGVIFRAITRLKQICNHPGLFI 694 Query: 44 EEKHWKEVHDEK----IKALEVIIEKANAAPIIVAYH-FNSDLARLQKA-------FPQG 91 ++ K ++ LE + E+ ++A I Y F LAR+ + G Sbjct: 695 HDRGVLPERSGKVSRLLEMLEEVSEEGDSALIFTQYATFAEYLARILEERFLIPVFLLTG 754 Query: 92 RT-LDKDPCTIQEWNEGKIP-LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIE 149 +T + ++E+ K P + G GLNL + + WW+ Q + Sbjct: 755 KTSRRERERLVREFQSSKEPSFFVISLKAGGTGLNLTAATH-VFHVDRWWNPAVEDQATD 813 Query: 150 RIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 R + G K+ V V+ +IA T++E + + K + +L Sbjct: 814 R-----TYRIGQKQNVQVHLMIAAGTLEEQIDRINAEKRILGREVL 854 >gi|327309026|ref|XP_003239204.1| SWI/SNF family DNA-dependent ATPase Ris1 [Trichophyton rubrum CBS 118892] gi|326459460|gb|EGD84913.1| SWI/SNF family DNA-dependent ATPase Ris1 [Trichophyton rubrum CBS 118892] Length = 1171 Score = 98.5 bits (244), Expect = 5e-19, Method: Composition-based stats. Identities = 27/166 (16%), Positives = 63/166 (37%), Gaps = 22/166 (13%) Query: 45 EKHWKEVHDEKIKALEVIIEK---ANAAPIIVAYHFNSDLARLQ----------KAFPQG 91 +K W+ K+ I++ + I+ F S L ++ + + Sbjct: 991 DKRWE--TSAKVDKTIEILQSLRDSGDEKTIIFSQFTSLLDLIEVPINRRGWNYRRYDGS 1048 Query: 92 -RTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 + D++ + + ++ + GLNL + ++ +W+ Q I+R Sbjct: 1049 MKPADRNDSVLDFTDNPDCRIMLVSLKAGNSGLNL-VAASQVIILDPFWNPYIEDQAIDR 1107 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + G R V V+ L+ +NT+++ ++ K I + L+ Sbjct: 1108 -----AHRIGQLRPVMVHRLLIENTVEDRIIALQDKKRQIIEGALD 1148 >gi|302667512|ref|XP_003025339.1| SWI/SNF family DNA-dependent ATPase, putative [Trichophyton verrucosum HKI 0517] gi|291189444|gb|EFE44728.1| SWI/SNF family DNA-dependent ATPase, putative [Trichophyton verrucosum HKI 0517] Length = 1167 Score = 98.5 bits (244), Expect = 5e-19, Method: Composition-based stats. Identities = 27/166 (16%), Positives = 63/166 (37%), Gaps = 22/166 (13%) Query: 45 EKHWKEVHDEKIKALEVIIEK---ANAAPIIVAYHFNSDLARLQ----------KAFPQG 91 +K W+ K+ I++ + I+ F S L ++ + + Sbjct: 991 DKRWE--TSAKVDKTIEILQSLRDSGDEKTIIFSQFTSLLDLIEVPINRRGWNYRRYDGS 1048 Query: 92 -RTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 + D++ + + ++ + GLNL + ++ +W+ Q I+R Sbjct: 1049 MKPADRNDSVLDFTDNPDCRIMLVSLKAGNSGLNL-VAASQVIILDPFWNPYIEDQAIDR 1107 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + G R V V+ L+ +NT+++ ++ K I + L+ Sbjct: 1108 -----AHRIGQLRPVMVHRLLIENTVEDRIIALQDKKRQIIEGALD 1148 >gi|302504563|ref|XP_003014240.1| SWI/SNF family DNA-dependent ATPase, putative [Arthroderma benhamiae CBS 112371] gi|291177808|gb|EFE33600.1| SWI/SNF family DNA-dependent ATPase, putative [Arthroderma benhamiae CBS 112371] Length = 1171 Score = 98.5 bits (244), Expect = 5e-19, Method: Composition-based stats. Identities = 27/166 (16%), Positives = 63/166 (37%), Gaps = 22/166 (13%) Query: 45 EKHWKEVHDEKIKALEVIIEK---ANAAPIIVAYHFNSDLARLQ----------KAFPQG 91 +K W+ K+ I++ + I+ F S L ++ + + Sbjct: 991 DKRWE--TSAKVDKTIEILQSLRDSGDEKTIIFSQFTSLLDLIEVPINRRGWNYRRYDGS 1048 Query: 92 -RTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 + D++ + + ++ + GLNL + ++ +W+ Q I+R Sbjct: 1049 MKPADRNDSVLDFTDNPDCRIMLVSLKAGNSGLNL-VAASQVIILDPFWNPYIEDQAIDR 1107 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + G R V V+ L+ +NT+++ ++ K I + L+ Sbjct: 1108 -----AHRIGQLRPVMVHRLLIENTVEDRIIALQDKKRQIIEGALD 1148 >gi|328874980|gb|EGG23345.1| SNF2-related domain-containing protein [Dictyostelium fasciculatum] Length = 937 Score = 98.5 bits (244), Expect = 5e-19, Method: Composition-based stats. Identities = 32/156 (20%), Positives = 60/156 (38%), Gaps = 18/156 (11%) Query: 54 EKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAF---------PQGRT-LDKDPCTIQE 103 + + L I K + +++ ++ L L G T +D + Sbjct: 632 QFVDKLLAGIRKTSKDRVVIISNYTQTLTVLAGMMRTRGYEFFQLDGSTSVDNRQKMVDL 691 Query: 104 WNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGF 161 +N+ + + G GLNL G N LV + W+ Q + R+ + G Sbjct: 692 FNDPSRNEFVFLLSSKAGGVGLNL-IGANHLVLYDPDWNPANDLQAMARVW-----REGQ 745 Query: 162 KRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 K+ V +Y ++ TI+E + QR TK + ++ Sbjct: 746 KKVVSIYRTLSTGTIEEKIFQRQITKMALSTSVVEG 781 >gi|225468254|ref|XP_002267456.1| PREDICTED: hypothetical protein isoform 2 [Vitis vinifera] Length = 848 Score = 98.5 bits (244), Expect = 5e-19, Method: Composition-based stats. Identities = 30/161 (18%), Positives = 62/161 (38%), Gaps = 21/161 (13%) Query: 45 EKHWKEVHDEKIKALEVIIEKANAAPI----IVAYHFNSDLARLQKAFP----QGRTLDK 96 + +E LE + + + + IV + L L+ Q R LD Sbjct: 666 GNSSLKSSNETTSGLENLSDSHSEGLLKETSIVFSQWTRMLDLLESCLKNSSIQYRRLDG 725 Query: 97 D------PCTIQEWNE-GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIE 149 ++++N ++ ++ + GLN+ ++L+ LWW+ Q I+ Sbjct: 726 TMSVVARDKAVKDFNTLPEVSVMIMSLKAASLGLNMVAACHVLLL-DLWWNPTTEDQAID 784 Query: 150 RIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 R + G R V V L ++T+++ +L + K + Sbjct: 785 R-----AHRIGQTRPVTVLRLTVKDTVEDRILALQQKKREM 820 >gi|2213862|gb|AAC47719.1| PfSNF2L [Plasmodium falciparum] Length = 1422 Score = 98.5 bits (244), Expect = 5e-19, Method: Composition-based stats. Identities = 46/224 (20%), Positives = 91/224 (40%), Gaps = 37/224 (16%) Query: 6 KFQRELYCDLQGENIEAFNSAS-----KTVKCLQL---ANGAVYYD--------EEKHWK 49 K Q++LY D+ +NI+ N+ + +QL N +D E H Sbjct: 560 KLQKKLYSDILSKNIDVLNAMTGSKNQMLNILMQLRKCCNHPYLFDGIEEPPYIEGNHLI 619 Query: 50 EVHDEKIKALEVIIEKANA--APIIVAYHFNSDLARLQ-----KAFPQGRTLDKDPCT-- 100 E K+ L+ ++ + + +++ L + K +P R P Sbjct: 620 E-TSGKMSLLDKLLPRLKKENSRVLLFSQMTRLLDIIDDYCRWKNYPYLRIDGSTPGDER 678 Query: 101 ---IQEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTR 155 I ++NE K + + G G+NL +I++ F ++ + Q ++R Sbjct: 679 QVRINQFNEPNSKYFIFLLSTRAGGIGINLTT-ADIVILFDSDYNPQMDIQAMDR----- 732 Query: 156 QRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 + G K+ V VY + QN+++E +++R K + L++ K Sbjct: 733 AHRIGQKKRVIVYRFVTQNSVEEKIVERAAKKLKLDSLIIQKGK 776 >gi|324502629|gb|ADY41155.1| DNA excision repair protein ERCC-6 [Ascaris suum] Length = 1156 Score = 98.5 bits (244), Expect = 6e-19, Method: Composition-based stats. Identities = 36/151 (23%), Positives = 59/151 (39%), Gaps = 18/151 (11%) Query: 56 IKALEVIIEKANAAPIIVAYHFNSDLARLQK----------AFPQGRTLDKDPCTIQEWN 105 +KAL + + N +++ L L+K + ++++N Sbjct: 603 LKALLKLWKDQN-QKVLLFSQSRQMLTLLEKFVIKEGYEYLRMDGSTPIGSRQPLVEKFN 661 Query: 106 -EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA 164 I L G G+NL G N +V F W+ Q ER + G +RA Sbjct: 662 TNEDIFLFLLTTKVGGLGVNLT-GANRVVIFDPDWNPSTDVQARERAW-----RIGQERA 715 Query: 165 VFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 V VY L+ TI+E + QR K + + +L Sbjct: 716 VTVYRLLTSGTIEEKIYQRQIFKQFLANRVL 746 >gi|241951878|ref|XP_002418661.1| helicase, putative [Candida dubliniensis CD36] gi|223642000|emb|CAX43964.1| helicase, putative [Candida dubliniensis CD36] Length = 1636 Score = 98.5 bits (244), Expect = 6e-19, Method: Composition-based stats. Identities = 29/166 (17%), Positives = 71/166 (42%), Gaps = 19/166 (11%) Query: 44 EEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAF---------PQGR 92 +K + K++ L +++ + ++ L L++ G Sbjct: 1351 PDKTLLQYDCGKLQKLATLLQDLTSKGHRALIFTQMTKVLDILEQFLNIHGYRYMRLDGA 1410 Query: 93 TLDKDPCTI-QEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 T +D + +++N + KIP+ S G G+NL G + ++F+ W+ +Q +R Sbjct: 1411 TKIEDRQLLTEKFNRDPKIPVFILSTRSGGLGINLT-GADTVIFYDSDWNPAMDKQCQDR 1469 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + G R V +Y +++ TI+ ++++ K + ++++ Sbjct: 1470 C-----HRIGQVRDVHIYRFVSEYTIESNIIKKANQKRQLDNVVIQ 1510 >gi|156037672|ref|XP_001586563.1| hypothetical protein SS1G_12550 [Sclerotinia sclerotiorum 1980] gi|154697958|gb|EDN97696.1| hypothetical protein SS1G_12550 [Sclerotinia sclerotiorum 1980 UF-70] Length = 938 Score = 98.5 bits (244), Expect = 6e-19, Method: Composition-based stats. Identities = 40/168 (23%), Positives = 63/168 (37%), Gaps = 23/168 (13%) Query: 52 HDEKIKALEVIIEKANAAPIIVAY----HFNSDLARLQKAF---------PQGRTLDKDP 98 + + LE I + I+VA ++ S L L G T Sbjct: 619 NSNVAQLLESIPPEILKKNIVVASILVSNYTSTLDLLMSHLSSLNLPFLRLDGSTPQAKR 678 Query: 99 CT-IQEWN---EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 + +N K S G G+NL G + LV F + W+ Q + RI Sbjct: 679 QDLVNTFNKTPASKYFAFLLSAKSGGAGINL-IGASRLVLFDVDWNPATDLQAMARI--- 734 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKET 202 + G KR+V +Y + +DE + QR TK + D +++ K E Sbjct: 735 --HRDGQKRSVKIYRFLMSGGMDEKIYQRQVTKIGLADSVMDGKKNEA 780 >gi|124803472|ref|XP_001347729.1| PfSNF2L [Plasmodium falciparum 3D7] gi|23495979|gb|AAN35642.1|AE014836_39 PfSNF2L [Plasmodium falciparum 3D7] Length = 1426 Score = 98.5 bits (244), Expect = 6e-19, Method: Composition-based stats. Identities = 46/224 (20%), Positives = 91/224 (40%), Gaps = 37/224 (16%) Query: 6 KFQRELYCDLQGENIEAFNSAS-----KTVKCLQL---ANGAVYYD--------EEKHWK 49 K Q++LY D+ +NI+ N+ + +QL N +D E H Sbjct: 563 KLQKKLYSDILSKNIDVLNAMTGSKNQMLNILMQLRKCCNHPYLFDGIEEPPYIEGNHLI 622 Query: 50 EVHDEKIKALEVIIEKANA--APIIVAYHFNSDLARLQ-----KAFPQGRTLDKDPCT-- 100 E K+ L+ ++ + + +++ L + K +P R P Sbjct: 623 E-TSGKMSLLDKLLPRLKKENSRVLLFSQMTRLLDIIDDYCRWKNYPYLRIDGSTPGDER 681 Query: 101 ---IQEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTR 155 I ++NE K + + G G+NL +I++ F ++ + Q ++R Sbjct: 682 QVRINQFNEPNSKYFIFLLSTRAGGIGINLTT-ADIVILFDSDYNPQMDIQAMDR----- 735 Query: 156 QRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 + G K+ V VY + QN+++E +++R K + L++ K Sbjct: 736 AHRIGQKKRVIVYRFVTQNSVEEKIVERAAKKLKLDSLIIQKGK 779 >gi|255544141|ref|XP_002513133.1| DNA repair helicase rad5,16, putative [Ricinus communis] gi|223548144|gb|EEF49636.1| DNA repair helicase rad5,16, putative [Ricinus communis] Length = 993 Score = 98.5 bits (244), Expect = 6e-19, Method: Composition-based stats. Identities = 22/128 (17%), Positives = 50/128 (39%), Gaps = 17/128 (13%) Query: 72 IVAYHFNSDLARLQ----------KAFPQGRTLDKDPCTIQEWN-EGKIPLLFAHPASCG 120 I+ + S L ++ + TL ++++N + ++ ++ + Sbjct: 838 IIFSQWTSMLDLVEFSLNQHCIQYRRLDGTMTLGARDRAVKDFNTDPEVTVMLMSLKAGN 897 Query: 121 HGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELV 180 GLN+ ++ LWW+ Q ++R + G R V V L ++T+++ + Sbjct: 898 LGLNM-VAACHVILLDLWWNPTTEDQAVDR-----AHRIGQTRPVTVTRLTIKDTVEDRI 951 Query: 181 LQRLRTKS 188 L K Sbjct: 952 LALQEEKR 959 >gi|261333966|emb|CBH16960.1| DNA repair protein, putative [Trypanosoma brucei gambiense DAL972] Length = 984 Score = 98.1 bits (243), Expect = 6e-19, Method: Composition-based stats. Identities = 28/156 (17%), Positives = 56/156 (35%), Gaps = 18/156 (11%) Query: 54 EKIKALEV-IIEKANAAPIIVAYHFNSDLARLQ----------KAFPQGRTLDKDPCTIQ 102 K+ A+ I +IV F L +Q L + ++ Sbjct: 816 TKLDAITEYICSIPEEEKVIVFSQFGDTLDLIQLWLQKVKVKTVKLVGSLMLSQRQAVLR 875 Query: 103 EW-NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGF 161 + ++ + + + G GLNLQ N +V WW+ Q +R + G Sbjct: 876 AFLHDKSVRAILISLKAGGEGLNLQI-ANHVVLVDPWWNPAVEMQAAQR-----AHRIGQ 929 Query: 162 KRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 R V V + + +++E +L+ K + + ++ Sbjct: 930 TRPVRVVRFVTERSVEERMLELQEKKMLVIEGTIDG 965 >gi|170115166|ref|XP_001888778.1| SWR1 complex protein, SNF2 family DNA-dependent ATPase [Laccaria bicolor S238N-H82] gi|164636254|gb|EDR00551.1| SWR1 complex protein, SNF2 family DNA-dependent ATPase [Laccaria bicolor S238N-H82] Length = 1767 Score = 98.1 bits (243), Expect = 6e-19, Method: Composition-based stats. Identities = 32/155 (20%), Positives = 71/155 (45%), Gaps = 19/155 (12%) Query: 55 KIKALEVII--EKANAAPIIVAYHFNSDLARLQ---------KAFPQGRTLDKDPCTI-Q 102 K++ L ++ +KA +++ L L+ G T +D I + Sbjct: 1501 KLQELANLLRDKKAGGHRVLIFTQMTKILDILEIFLNFHGYLYLRLDGATKIEDRQYITE 1560 Query: 103 EWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGF 161 +N + ++ A S G G+NL G + +VF+ ++ + ++R R + G Sbjct: 1561 RFNADPRVFCFIASSRSGGVGINLT-GADTVVFYDSDFNPQ-----MDRQCEDRAHRIGQ 1614 Query: 162 KRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 R V +Y ++Q+T++E +L++ K ++ D+++ Sbjct: 1615 IRDVHIYRFVSQHTVEEAMLRKANQKRSLDDIVIQ 1649 >gi|14090511|gb|AAK53539.1| DOMINO B [Drosophila melanogaster] Length = 2497 Score = 98.1 bits (243), Expect = 6e-19, Method: Composition-based stats. Identities = 29/156 (18%), Positives = 63/156 (40%), Gaps = 19/156 (12%) Query: 55 KIKALEVIIEKA--NAAPIIVAYHFNSDLARLQ---------KAFPQGRTLDKDPCTI-Q 102 K++ ++ ++ + N +++ L L+ G T + + + Sbjct: 1659 KLQTMDRLLRQLKVNGHRVLIFTQMTKMLDVLEAFLNYHGHIYLRLDGSTRVEQRQILME 1718 Query: 103 EWNEGK-IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGF 161 +N K I S G G+NL G + ++F+ W+ Q +R + G Sbjct: 1719 RFNGDKRIFCFILSTRSGGVGINLT-GADTVIFYDSDWNPTMDAQAQDRC-----HRIGQ 1772 Query: 162 KRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 R V +Y L+++ TI+ +L++ K + D+ + Sbjct: 1773 TRDVHIYRLVSERTIEVNILKKANQKRMLSDMAIEG 1808 >gi|6822074|emb|CAB71002.1| TATA box binding protein (TBP) associated factor (TAF)-like protein [Arabidopsis thaliana] Length = 2049 Score = 98.1 bits (243), Expect = 6e-19, Method: Composition-based stats. Identities = 40/201 (19%), Positives = 76/201 (37%), Gaps = 37/201 (18%) Query: 32 CLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEK---------ANA------APIIVAYH 76 + NG E H + H K+ AL+ I+E+ ++ +++ Sbjct: 1773 LAAMINGCSDIITELHKVQ-HSPKLVALQEILEECGIGSDASSSDGTLSVGQHRVLIFAQ 1831 Query: 77 FNSDLARLQK-------------AFPQGRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHG 122 + L ++K +K ++ +N + I +L G G Sbjct: 1832 HKALLDIIEKDLFQAHMKSVTYMRLDGSVVPEKRFEIVKAFNSDPTIDVLLLTTHVGGLG 1891 Query: 123 LNLQYGGNILVFFSLWWDLEEHQQ-MIERI-----GVTRQRQAGFKRAVFVYYLIAQNTI 176 LNL + LVF W+ Q + + R + G KR V V+ LI + T+ Sbjct: 1892 LNLT-SADTLVFMEHDWNPMRDHQFANIELNKLWQAMDRAHRLGQKRVVNVHRLIMRGTL 1950 Query: 177 DELVLQRLRTKSTIQDLLLNA 197 +E V+ + K ++ + ++NA Sbjct: 1951 EEKVMSLQKFKVSVANTVINA 1971 >gi|299116533|emb|CBN74721.1| SNF2-related domain-containing protein [Ectocarpus siliculosus] Length = 1075 Score = 98.1 bits (243), Expect = 6e-19, Method: Composition-based stats. Identities = 36/167 (21%), Positives = 68/167 (40%), Gaps = 23/167 (13%) Query: 48 WKEVHDEKIKALEVIIEKAN----AAPIIVAYHFNSDLARLQK----------AFPQGRT 93 ++ K+ LE +++ ++VA +F S L L+ G T Sbjct: 751 YETGASGKMTVLEALLKAVRREYPGDKVVVASNFTSALDVLETLAERNAWGFLRLDGGTT 810 Query: 94 LDKDPCTIQEWNEG---KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 + + +N + L + + G GLNL G N +V F W+ Q + R Sbjct: 811 TNARQNLVDRFNRASPEDLFLFYLSTKAGGVGLNL-VGANRIVLFDSDWNPATDDQAMAR 869 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + + G + V +Y L++ T++E + QR K + DL+ ++ Sbjct: 870 VW-----RLGQTKEVSMYRLLSTGTLEESIFQRQIFKGALYDLIHDS 911 >gi|330931645|ref|XP_003303483.1| hypothetical protein PTT_15707 [Pyrenophora teres f. teres 0-1] gi|311320499|gb|EFQ88422.1| hypothetical protein PTT_15707 [Pyrenophora teres f. teres 0-1] Length = 1731 Score = 98.1 bits (243), Expect = 6e-19, Method: Composition-based stats. Identities = 34/214 (15%), Positives = 78/214 (36%), Gaps = 34/214 (15%) Query: 16 QGENIEAFNSASKTVKCLQL----ANGAVYYDEEKHWKEVH----------DEKIKALEV 61 + ++ A+ + +QL + VY E + +V K+ LE+ Sbjct: 991 SDKQLKQQERANLSNILMQLRKCLCHPFVYSREIEERSDVAAVSHRNLVEASAKLSLLEM 1050 Query: 62 IIEKAN--AAPIIVAYHFNSDLARLQKAFPQGRTLDKD----------PCTIQEWNEGKI 109 ++ K + +++ F L ++ + + I ++N Sbjct: 1051 LLPKLHERGHRVLIFSQFLDMLNIIEDFLDGMQLSYQRLDGSMGSLEKQKRIDQFNAPDS 1110 Query: 110 PLL--FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFV 167 PL + G G+NL + ++ W+ + Q I R + G K+ V Sbjct: 1111 PLFAFLLSTRAGGVGINL-ATADTVIILDPDWNPHQDLQAIAR-----AHRIGQKKKVLC 1164 Query: 168 YYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 L + +++E ++Q + K + +++ L +E Sbjct: 1165 LQLATRASVEEKIMQMGKKKMALDKVVVQDLDRE 1198 >gi|302693046|ref|XP_003036202.1| hypothetical protein SCHCODRAFT_50771 [Schizophyllum commune H4-8] gi|300109898|gb|EFJ01300.1| hypothetical protein SCHCODRAFT_50771 [Schizophyllum commune H4-8] Length = 1898 Score = 98.1 bits (243), Expect = 6e-19, Method: Composition-based stats. Identities = 36/197 (18%), Positives = 67/197 (34%), Gaps = 20/197 (10%) Query: 13 CDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPII 72 D + ++ A K + QL + E I A + ++ Sbjct: 1633 VDRPADGLKDIQHAPKLLALKQLLTDCGIGVTASAAESGKSELIDAGPESAGAFSQHRVL 1692 Query: 73 VAYHFNSDLARLQK-------------AFPQGRTLDKDPCTIQEWN-EGKIPLLFAHPAS 118 + L ++ G K +Q +N + I L Sbjct: 1693 IFCQMKQMLDIIESDLFKQHMPSVTYMRLDGGTDASKRHAIVQTFNSDPSIDCLLLTTHV 1752 Query: 119 CGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDE 178 G GL L G + ++F W+ + Q ++R + G K+ V VY LI + T++E Sbjct: 1753 GGLGLTLT-GADTVIFVEHDWNPMKDLQAMDR-----AHRIGQKKVVNVYRLITKGTLEE 1806 Query: 179 LVLQRLRTKSTIQDLLL 195 ++ R K I + ++ Sbjct: 1807 KIMGLQRFKLNIANSVV 1823 >gi|124807036|ref|XP_001350892.1| DNA repair protein rhp16, putative [Plasmodium falciparum 3D7] gi|23497022|gb|AAN36572.1|AE014852_16 DNA repair protein rhp16, putative [Plasmodium falciparum 3D7] Length = 1647 Score = 98.1 bits (243), Expect = 6e-19, Method: Composition-based stats. Identities = 28/159 (17%), Positives = 60/159 (37%), Gaps = 22/159 (13%) Query: 52 HDEKIKAL----EVIIEKANAAPIIVAYHFNSDLARLQKAFPQ-----------GRTLDK 96 KI+A+ + +I + ++ + S L ++ + + + Sbjct: 1475 SSTKIEAVYEEVQNVINNTDDK-CLIFSQYCSMLDLIEYHLKKHNIVCSKLLGYMSMISR 1533 Query: 97 DPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 + + ++ +L + G GLNLQ N + WW+ Q I+R Sbjct: 1534 NNILYNFNQDKQLRVLLISLKAGGEGLNLQV-ANRIFIVDPWWNPAAELQAIQR-----A 1587 Query: 157 RQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 + G + V+ I +NT++E ++Q K + D + Sbjct: 1588 HRIGQTKTVYAIRFIIENTVEEKIIQLQNKKQLVFDSTI 1626 >gi|28573600|ref|NP_788424.1| domino, isoform E [Drosophila melanogaster] gi|28380650|gb|AAM70872.2| domino, isoform E [Drosophila melanogaster] Length = 2497 Score = 98.1 bits (243), Expect = 6e-19, Method: Composition-based stats. Identities = 29/156 (18%), Positives = 63/156 (40%), Gaps = 19/156 (12%) Query: 55 KIKALEVIIEKA--NAAPIIVAYHFNSDLARLQ---------KAFPQGRTLDKDPCTI-Q 102 K++ ++ ++ + N +++ L L+ G T + + + Sbjct: 1659 KLQTMDRLLRQLKVNGHRVLIFTQMTKMLDVLEAFLNYHGHIYLRLDGSTRVEQRQILME 1718 Query: 103 EWNEGK-IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGF 161 +N K I S G G+NL G + ++F+ W+ Q +R + G Sbjct: 1719 RFNGDKRIFCFILSTRSGGVGINLT-GADTVIFYDSDWNPTMDAQAQDRC-----HRIGQ 1772 Query: 162 KRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 R V +Y L+++ TI+ +L++ K + D+ + Sbjct: 1773 TRDVHIYRLVSERTIEVNILKKANQKRMLSDMAIEG 1808 >gi|302784062|ref|XP_002973803.1| hypothetical protein SELMODRAFT_414152 [Selaginella moellendorffii] gi|300158135|gb|EFJ24758.1| hypothetical protein SELMODRAFT_414152 [Selaginella moellendorffii] Length = 338 Score = 98.1 bits (243), Expect = 6e-19, Method: Composition-based stats. Identities = 34/160 (21%), Positives = 65/160 (40%), Gaps = 19/160 (11%) Query: 42 YDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARL-----QKAFPQGRT--- 93 + E+ WKE K++AL +E + +V + + L L +K F R Sbjct: 164 VNVEEQWKE--SSKVEALLQQLETLRESKSVVFSQWTAFLDLLEIPLKRKNFRFVRLDGT 221 Query: 94 --LDKDPCTIQEW-NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 K ++++ N + ++ + G GLNL N + WW+ +Q I R Sbjct: 222 LSQHKREQVLKDFSNIPDVAVMLISLKAGGVGLNLTAASNAFLM-DPWWNPAVEEQAIMR 280 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 I + G + V + I +++++E + Q K + Sbjct: 281 I-----HRIGQTQNVSIKRFIVKDSVEERMQQVQARKQRL 315 >gi|254582288|ref|XP_002497129.1| ZYRO0D16082p [Zygosaccharomyces rouxii] gi|238940021|emb|CAR28196.1| ZYRO0D16082p [Zygosaccharomyces rouxii] Length = 810 Score = 98.1 bits (243), Expect = 6e-19, Method: Composition-based stats. Identities = 27/159 (16%), Positives = 60/159 (37%), Gaps = 20/159 (12%) Query: 52 HDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQK----------AFPQGRTLDKDPC 99 K++ L+ ++ +++ F L L+ D Sbjct: 559 SSGKLQVLQKLVLPLVEKGHKVLIFSQFIQMLDLLEDWCELNSLNALRIDGSVNNDTRKE 618 Query: 100 TIQEWN--EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 +++++ K + + G G+NL + +V F W+ + Q ++R Sbjct: 619 QLEKFDKKSSKEQVFLLSTRAAGLGINL-AAADTVVLFDSDWNPQVDLQAMDRC-----H 672 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + G V VY L NT++ ++L R +K ++ L++ Sbjct: 673 RIGQTNPVIVYRLCCDNTVEHVILTRATSKRRLEKLVIQ 711 >gi|167519292|ref|XP_001743986.1| hypothetical protein [Monosiga brevicollis MX1] gi|163777948|gb|EDQ91564.1| predicted protein [Monosiga brevicollis MX1] Length = 1542 Score = 98.1 bits (243), Expect = 6e-19, Method: Composition-based stats. Identities = 34/119 (28%), Positives = 54/119 (45%), Gaps = 12/119 (10%) Query: 80 DLARLQKAFPQGRTLDKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSL 137 D RL+ R D ++N+ P L + GLN+ YGGN ++ F + Sbjct: 1065 DFFRLEGETSSARRKD----MCDQFNQPDEPCRLFLVSIRAGATGLNM-YGGNRVILFDV 1119 Query: 138 WWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 W+ Q I R + G ++ V+VY L+A TI+E +L R K TI +++ Sbjct: 1120 SWNPATDNQAISRC-----HRYGQQKTVYVYRLVAAGTIEEHILSRQINKMTIFQNVID 1173 >gi|15231009|ref|NP_188635.1| SNF2 domain-containing protein / helicase domain-containing protein / RING finger domain-containing protein [Arabidopsis thaliana] gi|11994776|dbj|BAB03166.1| transcription factor-like protein [Arabidopsis thaliana] Length = 1047 Score = 98.1 bits (243), Expect = 6e-19, Method: Composition-based stats. Identities = 29/168 (17%), Positives = 62/168 (36%), Gaps = 21/168 (12%) Query: 34 QLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLA----RLQKAFP 89 Q+ + + YD++ L A I+ + L R+ ++ Sbjct: 862 QMPSSSRPYDDDDVTIVEPMR----LHSSSPSQGAVKTIIFSQWTGMLDLVELRILESGI 917 Query: 90 QGRTLD-------KDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLE 142 + R LD +D + + + ++ + GLN+ ++ LWW+ Sbjct: 918 EFRRLDGTMSLAARDRAVKEFSKKPDVKVMLMSLKAGNLGLNM-VAACHVILLDLWWNPT 976 Query: 143 EHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 Q I+R + G R V V + ++T+++ +L+ K T+ Sbjct: 977 TEDQAIDR-----AHRIGQTRPVTVTRITIKDTVEDRILKLQEEKRTM 1019 >gi|325107086|ref|YP_004268154.1| SNF2-related protein [Planctomyces brasiliensis DSM 5305] gi|324967354|gb|ADY58132.1| SNF2-related protein [Planctomyces brasiliensis DSM 5305] Length = 610 Score = 98.1 bits (243), Expect = 6e-19, Method: Composition-based stats. Identities = 42/204 (20%), Positives = 73/204 (35%), Gaps = 23/204 (11%) Query: 3 QYHKFQRELYCDLQ--GENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 Y ++E L G+ I + ++ Q+ N D D + +E Sbjct: 378 AYDIAEKEGVVQLNDMGDEITIQHVFELVMRLKQITN----CDPLTGESAKKDRLVADME 433 Query: 61 VIIEKANAAPIIVAYHFNSDLARLQKAFPQ---------GRTLDKDPCTIQEWNEGKIPL 111 I A+ A I+ + + L + Q T ++P Q + L Sbjct: 434 EI--AASGAKAILFSQWTKTIDWLYEHTKQFGALVYHGGVPTKQREPILKQFKEDPNSHL 491 Query: 112 LFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLI 171 L + GLNLQ+ + + WW+ Q I R + G K V V I Sbjct: 492 LLMSYGTGAVGLNLQFS-QYVFLYDRWWNPAIEDQAINR-----AHRIGVKNPVIVTRFI 545 Query: 172 AQNTIDELVLQRLRTKSTIQDLLL 195 ++T++E + L+ K I + +L Sbjct: 546 CKDTVEERIDLVLQQKRAIFEKVL 569 >gi|207345463|gb|EDZ72281.1| YGL163Cp-like protein [Saccharomyces cerevisiae AWRI1631] Length = 405 Score = 98.1 bits (243), Expect = 6e-19, Method: Composition-based stats. Identities = 31/151 (20%), Positives = 61/151 (40%), Gaps = 21/151 (13%) Query: 46 KHWKEVHDEKIKALEVI---IEKANAAPIIVAYHFNSDLARLQK----------AFPQGR 92 + + + K LE I+ + I++ ++ L ++K Sbjct: 241 RDVQTKYSAKFSILERFLHKIKTESDDKIVLISNYTQTLDLIEKMCRYKHYSAVRLDGTM 300 Query: 93 TLDKDPCTIQEWN--EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 +++K + +N EG+ + + G G+NL G N L+ W+ QQ + R Sbjct: 301 SINKRQKLVDRFNDPEGQEFIFLLSSKAGGCGINL-IGANRLILMDPDWNPAADQQALAR 359 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVL 181 + + G K+ F+Y I+ TI+E +L Sbjct: 360 VW-----RDGQKKDCFIYRFISTGTIEEKIL 385 >gi|125589589|gb|EAZ29939.1| hypothetical protein OsJ_13993 [Oryza sativa Japonica Group] Length = 1132 Score = 98.1 bits (243), Expect = 6e-19, Method: Composition-based stats. Identities = 45/189 (23%), Positives = 67/189 (35%), Gaps = 27/189 (14%) Query: 13 CDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAA--P 70 C L I + +C D E +WK K+ L I+E Sbjct: 933 CPLCRSPITKSELITLPSQCR------FQVDPENNWK--DSCKVIKLIKILEGLQEKREK 984 Query: 71 IIVAYHFNSDLARLQKAFPQGRTL----------DKDPCTIQEWNEGKIP-LLFAHPASC 119 IV F S L+ F Q ++E++E K +L + Sbjct: 985 SIVFSQFTSFFDLLEVPFNQKGIKFLRFDGKLSQKHREKVLKEFSESKDKLVLLMSLKAG 1044 Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 G GLNL N + WW+ +Q I RI + G KRAV V I ++T++E Sbjct: 1045 GVGLNLTAASN-VFLMDPWWNPAVEEQAIMRIP-----RIGQKRAVQVRRFIVKDTVEER 1098 Query: 180 VLQRLRTKS 188 + + K Sbjct: 1099 MQKVQACKQ 1107 >gi|91081375|ref|XP_972116.1| PREDICTED: similar to helicase [Tribolium castaneum] gi|270005181|gb|EFA01629.1| hypothetical protein TcasGA2_TC007199 [Tribolium castaneum] Length = 1011 Score = 98.1 bits (243), Expect = 6e-19, Method: Composition-based stats. Identities = 43/222 (19%), Positives = 86/222 (38%), Gaps = 37/222 (16%) Query: 6 KFQRELYCDLQGENIEAFNSASKTVK------CLQL---ANGAVYYD--EEKHWKEVHDE 54 K QRE Y + ++I+ N A K K +QL +N +D E + Sbjct: 362 KMQREWYTKVLMKDIDVVNGAGKVEKMRLQNILMQLRKCSNHPYLFDGAEPGPPYTTDEH 421 Query: 55 KIKALEVIIEK--------ANAAPIIVAYHFNSDLARLQ---------KAFPQGRTLDKD 97 + ++ + +++ L L+ G+T +D Sbjct: 422 LVYNCGKMVLLDKLLPKLKEQDSRVLIFSQMTRMLDILEDYCHWRQYNYCRLDGQTPHED 481 Query: 98 PC-TIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 I E+NE + + G G+NL ++++ + W+ + Q ++R Sbjct: 482 RQRQINEYNEPNSSKFIFMLSTRAGGLGINL-ATADVVIIYDSDWNPQMDLQAMDR---- 536 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + G K+ V V+ LI +NT++E +++R K + L++ Sbjct: 537 -AHRIGQKKQVRVFRLITENTVEEKIVERAEVKLRLDKLVIQ 577 >gi|37699520|gb|AAB95091.3| 89B helicase [Drosophila melanogaster] Length = 1924 Score = 98.1 bits (243), Expect = 6e-19, Method: Composition-based stats. Identities = 34/188 (18%), Positives = 72/188 (38%), Gaps = 34/188 (18%) Query: 33 LQLANGAVYYDEEKHWKEVHDEKIKALEVII---------EKANAAPIIVAYHFNSDLAR 83 QLA D+ +H K+ AL+ ++ E + ++ + L Sbjct: 1675 SQLALSNSSLDDIEH-----SAKLPALKQLLLDCGIGVQTESVSQHRALIFCQLKAMLDI 1729 Query: 84 LQK-------------AFPQGRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGG 129 +++ + + +N + I +L G GLNL G Sbjct: 1730 VEQDLLRRHLPSVTYLRLDGSVPASQRQDIVNNFNSDPSIDVLLLTTMVGGLGLNLT-GA 1788 Query: 130 NILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKST 189 + ++F W+ + Q ++R + G K+ V VY LI +N+++E ++ + K Sbjct: 1789 DTVIFVEHDWNPMKDLQAMDR-----AHRIGQKKVVNVYRLITRNSLEEKIMGLQKFKIL 1843 Query: 190 IQDLLLNA 197 + +++A Sbjct: 1844 TANTVVSA 1851 >gi|297836766|ref|XP_002886265.1| predicted protein [Arabidopsis lyrata subsp. lyrata] gi|297332105|gb|EFH62524.1| predicted protein [Arabidopsis lyrata subsp. lyrata] Length = 1181 Score = 98.1 bits (243), Expect = 6e-19, Method: Composition-based stats. Identities = 33/156 (21%), Positives = 58/156 (37%), Gaps = 19/156 (12%) Query: 53 DEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQ----------KAFPQGRTLDKDPCT 100 K+K + +++ K +++ L L+ + + + Sbjct: 724 SGKMKVVAEVLKVWKQQGHRVLLFSQTQQMLDILESFLVANEYSYRRMDGLTPVKQRMAL 783 Query: 101 IQEWNE-GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQA 159 I E+N + + G G NL G N ++ F W+ Q ER + Sbjct: 784 IDEFNNSDDVFVFVLTTKVGGLGTNLT-GANRVIIFDPDWNPSNDMQARERAW-----RI 837 Query: 160 GFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 G K+ V VY LI + TI+E V R K + + +L Sbjct: 838 GQKKDVTVYRLITRGTIEEKVYHRQIYKHFLTNKIL 873 >gi|295673658|ref|XP_002797375.1| DNA repair protein RAD16 [Paracoccidioides brasiliensis Pb01] gi|226282747|gb|EEH38313.1| DNA repair protein RAD16 [Paracoccidioides brasiliensis Pb01] Length = 1084 Score = 98.1 bits (243), Expect = 6e-19, Method: Composition-based stats. Identities = 33/168 (19%), Positives = 63/168 (37%), Gaps = 18/168 (10%) Query: 42 YDEEKHWKEVHDEKIKALEVIIEKANAA-PIIVAYHFNSDLARLQKAFP-----QGRTLD 95 DE + + KI+ L I++K + IV F S L +++ R Sbjct: 826 DDEPETPDHLASTKIRHLMKILKKESGDYKFIVFSFFTSMLTKIEPFLKSANIGYARYDG 885 Query: 96 KDPCTIQEW------NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIE 149 ++E N K +L + GLNL + +V +W+ +Q I+ Sbjct: 886 AMRNDLRENSLDRLRNSPKTRVLLCSLRAGSLGLNLT-AASRVVILEPFWNPFVEEQAID 944 Query: 150 RIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 R+ + V +Y L +NT++E ++ K + + + Sbjct: 945 RV-----HRLNQTIDVKIYKLTVRNTVEERIVDLQERKRELANATIEG 987 >gi|168048890|ref|XP_001776898.1| SNF2 family DNA-dependent ATPase [Physcomitrella patens subsp. patens] gi|162671754|gb|EDQ58301.1| SNF2 family DNA-dependent ATPase [Physcomitrella patens subsp. patens] Length = 1122 Score = 98.1 bits (243), Expect = 6e-19, Method: Composition-based stats. Identities = 43/207 (20%), Positives = 74/207 (35%), Gaps = 31/207 (14%) Query: 7 FQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVII--- 63 EL + + F+ ++ ++ LQ + A DE WK K+ L ++ Sbjct: 839 LDAELKSQIIAAGLSRFSDSTDNIEVLQ--SRASLSDEG--WK--FSGKLACLYWLLRTV 892 Query: 64 ----EKANAAPIIVAYHFNSDLARLQK----------AFPQGRTLDKDPCTIQEWNEG-- 107 ++V +F L +Q K + + N G Sbjct: 893 YTSRTARQKDRVVVVSNFTRTLDLIQDMCTSQGWNWLRLDGSTEASKRQLLVDQLNSGVG 952 Query: 108 KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFV 167 + + + G GLNL G N LV F W+ Q I RI + G + V + Sbjct: 953 DVFVFLLSSKAGGTGLNL-IGANRLVLFDPDWNPATDSQAIARIW-----REGQLKPVLI 1006 Query: 168 YYLIAQNTIDELVLQRLRTKSTIQDLL 194 Y L++ +I+E + QR K + + Sbjct: 1007 YRLLSTGSIEEKIYQRQIMKGGMSAAV 1033 >gi|290999423|ref|XP_002682279.1| predicted protein [Naegleria gruberi] gi|284095906|gb|EFC49535.1| predicted protein [Naegleria gruberi] Length = 1635 Score = 98.1 bits (243), Expect = 6e-19, Method: Composition-based stats. Identities = 32/165 (19%), Positives = 70/165 (42%), Gaps = 19/165 (11%) Query: 44 EEKHWKEVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQKAF---------PQGR 92 +K + K++ L +++ I++ + L L+ G+ Sbjct: 1317 PDKRLLQFDCGKLQKLSNLLKDLKRGGHRILIFTQMSKMLDVLESFMSMNGHSYFRLDGQ 1376 Query: 93 TLDKDPC-TIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 T ++ ++ +N + KI S G G+NL G + ++F+ W+ Q +R Sbjct: 1377 TKLEERQYMMERFNTDPKIFAFILSTRSGGVGINLT-GADTVIFYDSDWNPAMDAQAQDR 1435 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 + G R V +Y LI+++TI+E +L + K + ++++ Sbjct: 1436 C-----HRIGQTRNVNIYRLISESTIEERILLKANQKRHMNEIVI 1475 >gi|255076739|ref|XP_002502040.1| predicted protein [Micromonas sp. RCC299] gi|226517305|gb|ACO63298.1| predicted protein [Micromonas sp. RCC299] Length = 1481 Score = 98.1 bits (243), Expect = 6e-19, Method: Composition-based stats. Identities = 37/172 (21%), Positives = 63/172 (36%), Gaps = 21/172 (12%) Query: 41 YYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQG----RTLDK 96 Y + E+ K + EK+ L + ++ L L+ A + R +D Sbjct: 940 YGEAERSGKLLVTEKVLGLW----REQGHRCLLFSQTQQMLDILEAAIARAGYTYRRMDG 995 Query: 97 DP------CTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIE 149 I E+N + + + G G+NL G + ++ + W+ Q E Sbjct: 996 TTPVSHRMRLIDEFNGDDDVFVFLLTTKVGGLGVNLT-GADRVLLYDPDWNPSTDAQARE 1054 Query: 150 RIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 R + G + V VY LI TI+E V R K + +L K+ Sbjct: 1055 RAW-----RIGQTKEVTVYRLITAGTIEEKVYHRQIYKEFLTSKVLKDPKQR 1101 >gi|195486513|ref|XP_002091544.1| domino [Drosophila yakuba] gi|194177645|gb|EDW91256.1| domino [Drosophila yakuba] Length = 3195 Score = 98.1 bits (243), Expect = 6e-19, Method: Composition-based stats. Identities = 30/156 (19%), Positives = 63/156 (40%), Gaps = 19/156 (12%) Query: 55 KIKALEVIIEKA--NAAPIIVAYHFNSDLARLQ---------KAFPQGRTLDKDPCTI-Q 102 K++ ++ ++ + N ++V L L+ G T + + + Sbjct: 1665 KLQTMDRLLRQLKVNGHRVLVFTQMTKMLDVLESFLNYHGHIYLRLDGSTRVEQRQILME 1724 Query: 103 EWNEGK-IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGF 161 +N K I S G G+NL G + ++F+ W+ Q +R + G Sbjct: 1725 RFNGDKRIFCFILSTRSGGVGINLT-GADTVIFYDSDWNPTMDAQAQDRC-----HRIGQ 1778 Query: 162 KRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 R V +Y L+++ TI+ +L++ K + D+ + Sbjct: 1779 TRDVHIYRLVSERTIEVNILKKANQKRMLTDMAIEG 1814 >gi|190347724|gb|EDK40055.2| hypothetical protein PGUG_04153 [Meyerozyma guilliermondii ATCC 6260] Length = 990 Score = 98.1 bits (243), Expect = 6e-19, Method: Composition-based stats. Identities = 44/231 (19%), Positives = 91/231 (39%), Gaps = 38/231 (16%) Query: 6 KFQRELYCDLQGENIEAFNSASK----------TVKCLQLANGAVYYD--EEKHWKEVHD 53 QR Y + ++I+A N A+K ++ + N ++ E + Sbjct: 373 DMQRSWYQKILEKDIDAVNGANKKESKTRLLNIVMQLRKCCNHPYLFEGAEPGPPFTTDE 432 Query: 54 E------KIKALEVIIE--KANAAPIIVAYHFNSDLARL---------QKAFPQGRTLDK 96 K+K L+ +++ ++ + +++ + L L Q G+T Sbjct: 433 HLVYNAEKMKILDQLLKKFQSEGSRVLIFSQMSRMLDILEDYCAFREFQYCRIDGQTDHA 492 Query: 97 DP-CTIQEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGV 153 D I E+N+ + + + G G+NL +I++ F W+ + Q ++R Sbjct: 493 DRVNAIDEYNKPGSEKFVFLLTTRAGGLGINLT-SADIVILFDSDWNPQADLQAMDR--- 548 Query: 154 TRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIH 204 + G + V V+ I +N I+E VL+R K + L++ + I Sbjct: 549 --AHRIGQTKQVKVFRFITENAIEEKVLERAAQKLRLDQLVIQQGRNSNIG 597 >gi|25013136|gb|AAN71681.1| SD16865p [Drosophila melanogaster] Length = 673 Score = 98.1 bits (243), Expect = 6e-19, Method: Composition-based stats. Identities = 34/188 (18%), Positives = 72/188 (38%), Gaps = 34/188 (18%) Query: 33 LQLANGAVYYDEEKHWKEVHDEKIKALEVII---------EKANAAPIIVAYHFNSDLAR 83 QLA D+ +H K+ AL+ ++ E + ++ + L Sbjct: 424 SQLALSNSSLDDIEH-----SAKLPALKQLLLDCGIGVQTESVSQHRALIFCQLKAMLDI 478 Query: 84 LQK-------------AFPQGRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGG 129 +++ + + +N + I +L G GLNL G Sbjct: 479 VEQDLLRRHLPSVTYLRLDGSVPASQRQDIVNNFNSDPSIDVLLLTTMVGGLGLNLT-GA 537 Query: 130 NILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKST 189 + ++F W+ + Q ++R + G K+ V VY LI +N+++E ++ + K Sbjct: 538 DTVIFVEHDWNPMKDLQAMDR-----AHRIGQKKVVNVYRLITRNSLEEKIMGLQKFKIL 592 Query: 190 IQDLLLNA 197 + +++A Sbjct: 593 TANTVVSA 600 >gi|297812401|ref|XP_002874084.1| hypothetical protein ARALYDRAFT_489124 [Arabidopsis lyrata subsp. lyrata] gi|297319921|gb|EFH50343.1| hypothetical protein ARALYDRAFT_489124 [Arabidopsis lyrata subsp. lyrata] Length = 1029 Score = 98.1 bits (243), Expect = 6e-19, Method: Composition-based stats. Identities = 39/160 (24%), Positives = 68/160 (42%), Gaps = 21/160 (13%) Query: 42 YDEEKHWKEVHDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQ-----KAFPQGR-- 92 D EK+W E KI AL +E +++ + I+ + + L LQ F R Sbjct: 853 VDVEKNWVE--SSKITALLEELEGLRSSGSKSILFSQWTAFLDLLQIPLSRNNFSFVRLD 910 Query: 93 -TLDK--DPCTIQEW-NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMI 148 TL++ ++E+ +G I +L + G G+NL N V WW+ +Q + Sbjct: 911 GTLNQQQREKVLKEFSEDGSILVLLMSLKAGGVGINLTAASNAFVM-DPWWNPAVEEQAV 969 Query: 149 ERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKS 188 RI + G ++V + I + T++E + K Sbjct: 970 MRI-----HRIGQTKSVKIRRFIVKGTVEERMEAVQARKQ 1004 >gi|66356826|ref|XP_625591.1| Swi/SNf2 RAD26 [Cryptosporidium parvum Iowa II] gi|46226589|gb|EAK87577.1| Swi/SNf2 RAD26 [Cryptosporidium parvum Iowa II] Length = 1181 Score = 98.1 bits (243), Expect = 6e-19, Method: Composition-based stats. Identities = 37/174 (21%), Positives = 63/174 (36%), Gaps = 25/174 (14%) Query: 47 HWKEVHDEKIKALEVIIE---KANAAPIIVAYHFNSDLARLQKAFPQ------------- 90 + K +AL I++ +++ L L + Sbjct: 711 NVNGRDSGKYQALMSILKLWRDKKEHRVLIFTQGVRTLKLLSALLEKDLGLIPNKDVLTL 770 Query: 91 --GRTLDKDPCTIQEWNEGK-IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQM 147 L ++ +N+ + I L G GLN+ G N ++ + WW+ Q Sbjct: 771 DGSTPLSTRFSLVKRFNQNQSIFLFILTSRVGGVGLNIT-GANRVILYDPWWNPMTDVQA 829 Query: 148 IERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 ER + G K+ V VY LI ++TI+E + QR K I +L K + Sbjct: 830 KERCW-----RIGQKKEVIVYRLITRDTIEEKIFQRQLFKEFIAKQILKDPKSQ 878 >gi|20988306|gb|AAH29930.1| BTAF1 protein [Homo sapiens] Length = 680 Score = 98.1 bits (243), Expect = 7e-19, Method: Composition-based stats. Identities = 33/145 (22%), Positives = 57/145 (39%), Gaps = 26/145 (17%) Query: 69 APIIVAYHFNSDLA-----------------RLQKAFPQGRTLDKDPCTIQEWNEGKIPL 111 I++ S L RL + P G+ + + N+ I + Sbjct: 476 HRILIFCQLKSMLDIVEHDLLKPHLPSVTYLRLDGSIPPGQ---RHSIVSRFNNDPSIDV 532 Query: 112 LFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLI 171 L G GLNL G + +VF W+ Q ++R + G KR V VY LI Sbjct: 533 LLLTTHVGGLGLNLT-GADTVVFVEHDWNPMRDLQAMDR-----AHRIGQKRVVNVYRLI 586 Query: 172 AQNTIDELVLQRLRTKSTIQDLLLN 196 + T++E ++ + K I + +++ Sbjct: 587 TRGTLEEKIMGLQKFKMNIANTVIS 611 >gi|307180236|gb|EFN68269.1| Helicase domino [Camponotus floridanus] Length = 2882 Score = 98.1 bits (243), Expect = 7e-19, Method: Composition-based stats. Identities = 30/156 (19%), Positives = 65/156 (41%), Gaps = 19/156 (12%) Query: 55 KIKALEVIIEK--ANAAPIIVAYHFNSDLARLQK----------AFPQGRTLDKDPCTIQ 102 K+++L+ ++ K + +++ L L+ +D+ ++ Sbjct: 1674 KLQSLDRLLRKLKSENHRVLIFTQMTRMLDVLEAFLNFHGHIYLRLDGTTRVDQRQILME 1733 Query: 103 EWNEGK-IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGF 161 +N K I S G G+NL G + ++F+ W+ Q +R + G Sbjct: 1734 RFNGDKRIFCFILSTRSGGVGVNLT-GADTVIFYDSDWNPTMDAQAQDRC-----HRIGQ 1787 Query: 162 KRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 R V +Y L+++ T++E +L++ K + DL + Sbjct: 1788 TRDVHIYRLVSEKTVEENILKKANQKRLLGDLAIEG 1823 >gi|238883925|gb|EEQ47563.1| conserved hypothetical protein [Candida albicans WO-1] Length = 785 Score = 98.1 bits (243), Expect = 7e-19, Method: Composition-based stats. Identities = 35/166 (21%), Positives = 64/166 (38%), Gaps = 19/166 (11%) Query: 44 EEKHWKEVHDEKIKAL-EVIIE-KANAAPIIVAYHFNSDLARLQKAFPQGRTL------- 94 EEK + KI L +++E + I++ ++ L L++ + Sbjct: 496 EEKFNLGMASGKINILVPLLLEIASLGEKIVLISNYTKTLDLLEQVLRKVSLTFSRLDGS 555 Query: 95 ---DKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 + + ++N I + S G G+NL G + L+ F W+ Q + R Sbjct: 556 TPNNVRNKLVNQFNTNPDINVFLLSSKSGGMGINL-VGASRLILFDNDWNPATDLQSMSR 614 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 I + G + F+Y L IDE + QR K+ + L+ Sbjct: 615 I-----HRDGQLKPCFIYRLFTTGCIDEKIFQRQLVKNKLSSKFLD 655 >gi|202029075|gb|ACH95308.1| LP03212p [Drosophila melanogaster] Length = 2642 Score = 98.1 bits (243), Expect = 7e-19, Method: Composition-based stats. Identities = 29/156 (18%), Positives = 63/156 (40%), Gaps = 19/156 (12%) Query: 55 KIKALEVIIEKA--NAAPIIVAYHFNSDLARLQ---------KAFPQGRTLDKDPCTI-Q 102 K++ ++ ++ + N +++ L L+ G T + + + Sbjct: 1118 KLQTMDRLLRQLKVNGHRVLIFTQMTKMLDVLEAFLNYHGHIYLRLDGSTRVEQRQILME 1177 Query: 103 EWNEGK-IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGF 161 +N K I S G G+NL G + ++F+ W+ Q +R + G Sbjct: 1178 RFNGDKRIFCFILSTRSGGVGINLT-GADTVIFYDSDWNPTMDAQAQDRC-----HRIGQ 1231 Query: 162 KRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 R V +Y L+++ TI+ +L++ K + D+ + Sbjct: 1232 TRDVHIYRLVSERTIEVNILKKANQKRMLSDMAIEG 1267 >gi|193204424|ref|NP_496802.2| BTAF (TBP-associated factor) homolog family member (btf-1) [Caenorhabditis elegans] gi|169402775|emb|CAB02491.2| C. elegans protein F15D4.1, partially confirmed by transcript evidence [Caenorhabditis elegans] gi|169402879|emb|CAB04949.2| C. elegans protein F15D4.1, partially confirmed by transcript evidence [Caenorhabditis elegans] gi|169402880|emb|CAQ16159.1| C. elegans protein F15D4.1, partially confirmed by transcript evidence [Caenorhabditis elegans] Length = 1649 Score = 98.1 bits (243), Expect = 7e-19, Method: Composition-based stats. Identities = 40/191 (20%), Positives = 71/191 (37%), Gaps = 32/191 (16%) Query: 26 ASKTVK---CLQLANGA-VYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDL 81 A+K+ K QL + + ++ ++ D L ++ A+ ++ + + Sbjct: 1401 AAKSGKMEALKQLLIECEICKNPDEEVEQPED-----LGGLV--ASGHRALIFCQWKTSA 1453 Query: 82 ARLQKAFPQGR--------------TLDKDPCTIQEWNEGK-IPLLFAHPASCGHGLNLQ 126 + A G + +NE K I +L G GLNL Sbjct: 1454 KLVSDALKSGEFGSVVSHLVLDGSVPAGDRMKMVNRFNEDKTIDVLILTTHVGGVGLNLT 1513 Query: 127 YGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRT 186 G + ++F W+ + Q I+R + G R V VY LI Q T++E V+ + Sbjct: 1514 -GADTVIFLDHDWNPMKDLQAIDR-----AHRLGQTRNVNVYRLITQGTVEEKVMSLAKF 1567 Query: 187 KSTIQDLLLNA 197 K L+ A Sbjct: 1568 KLNTAQALIGA 1578 >gi|302406510|ref|XP_003001091.1| SNF2 family ATP-dependent chromatin-remodeling factor snf21 [Verticillium albo-atrum VaMs.102] gi|261360349|gb|EEY22777.1| SNF2 family ATP-dependent chromatin-remodeling factor snf21 [Verticillium albo-atrum VaMs.102] Length = 1392 Score = 98.1 bits (243), Expect = 7e-19, Method: Composition-based stats. Identities = 42/227 (18%), Positives = 89/227 (39%), Gaps = 37/227 (16%) Query: 2 KQYHKF---QRELYCDLQGENIEAFNSASKTVKCLQLANGA------------VYYDEEK 46 K Y + + + D QG A ++ ++ +L N + ++K Sbjct: 755 KLYKQMVTHNKIVVSDGQGGKTGARGLSNMIMQLRKLCNHPFVFGEVENVMNPLNISDDK 814 Query: 47 HWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARL---------QKAFPQGRTL- 94 W+ K + L+ I+ K A +++ + + + + Q G T Sbjct: 815 LWR--TAGKFELLDRILPKYKATGHRVLMFFQMTAIMDIMEDYLRYRNYQYMRLDGTTKS 872 Query: 95 DKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIG 152 D+ ++++N P + + G GLNLQ + ++ + W+ + Q Sbjct: 873 DERSDLLKDFNAPDSPYFMFLLSTRAGGLGLNLQT-ADTVIIYDSDWNPHQDLQA----- 926 Query: 153 VTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 R + G K V + LI+ N+++E +L+R R K + ++ A + Sbjct: 927 QDRAHRIGQKNEVRILRLISSNSVEEKILERARFKLDMDGKVIQAGR 973 >gi|327280078|ref|XP_003224781.1| PREDICTED: TATA-binding protein-associated factor 172-like [Anolis carolinensis] Length = 2315 Score = 98.1 bits (243), Expect = 7e-19, Method: Composition-based stats. Identities = 43/204 (21%), Positives = 82/204 (40%), Gaps = 25/204 (12%) Query: 3 QYHKFQRELYCDLQGENIEAFNSASKTVKCLQL------ANGAVYYDEEKHWKEVHD--- 53 +Y + +L + ++ A K QL NG + + H Sbjct: 2056 EYKRITEKLAAE--NSSLRDIQHAPKLSALKQLLLDCGLGNGGSSENGTETVVAQHRILI 2113 Query: 54 -EKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLL 112 ++K++ I+E P + + + RL + P G+ + + N+ I +L Sbjct: 2114 FCQLKSMLDIVEHDLLKPHLPSITYL----RLDGSIPAGQ---RHSIVSRFNNDPSIDVL 2166 Query: 113 FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIA 172 G GLNL G + +VF W+ + Q ++R + G KR V VY LI Sbjct: 2167 LLTTHVGGLGLNLT-GADTVVFVEHDWNPMKDLQAMDR-----AHRIGQKRVVNVYRLIT 2220 Query: 173 QNTIDELVLQRLRTKSTIQDLLLN 196 + T++E ++ + K I + +++ Sbjct: 2221 RGTLEEKIMGLQKFKMNIANTVIS 2244 >gi|312211525|emb|CBX91610.1| hypothetical protein [Leptosphaeria maculans] Length = 1473 Score = 98.1 bits (243), Expect = 7e-19, Method: Composition-based stats. Identities = 32/162 (19%), Positives = 61/162 (37%), Gaps = 18/162 (11%) Query: 51 VHDEKIKALEVIIEKAN-AAPIIVAYHFNSDLARLQKAFPQG-----------RTLDKDP 98 V KI+ L I+EK +IV F S L ++ + R ++ Sbjct: 1245 VPSTKIRQLLSILEKETPEHKVIVFSQFTSMLDLIEPFLKRADYNFTRYDGSMRNDLREA 1304 Query: 99 CTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQ 158 + N+ + +L GLNL + +V +W+ +Q I+R+ + Sbjct: 1305 SLAKLRNDKRTRVLLCSLKCGSLGLNLT-AASRVVIMEPFWNPFVEEQAIDRV-----HR 1358 Query: 159 AGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKK 200 V VY L+ N+++E + + K + + + K Sbjct: 1359 LNQTVDVTVYRLLINNSVEERIQELQEAKRKLANAAIEGGKA 1400 >gi|170111204|ref|XP_001886806.1| SNF2 family DNA-dependent ATPase [Laccaria bicolor S238N-H82] gi|164638164|gb|EDR02443.1| SNF2 family DNA-dependent ATPase [Laccaria bicolor S238N-H82] Length = 928 Score = 98.1 bits (243), Expect = 7e-19, Method: Composition-based stats. Identities = 27/166 (16%), Positives = 65/166 (39%), Gaps = 24/166 (14%) Query: 52 HDEKIKALEVIIEKANAAP--IIVAYHFNSDLARLQK----------AFPQG--RTLDKD 97 K+ L+ ++ + +++ F + L ++ G + +++ Sbjct: 652 ASGKMMVLDRLLRELFRRKHKVLLFSQFTTMLNIIEDWATDYMGWNICRIDGSSKPMERR 711 Query: 98 PCTIQEWNEGKIP----LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGV 153 + N G P L + G G+NL + ++F+ W+ + Q Sbjct: 712 EAMNRFQNGGDDPDAPSLFLLSTRAGGLGINL-VAADTVIFYDQDWNPQMDAQA-----Q 765 Query: 154 TRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 R + G + V ++ L++ +TI+ ++QR K ++ L++ K Sbjct: 766 DRAHRIGQTKPVLIFRLVSAHTIETKIMQRATEKRKLEALVIAKGK 811 >gi|225848989|ref|YP_002729153.1| helicase, Snf2 family [Sulfurihydrogenibium azorense Az-Fu1] gi|225644628|gb|ACN99678.1| helicase, Snf2 family [Sulfurihydrogenibium azorense Az-Fu1] Length = 561 Score = 98.1 bits (243), Expect = 7e-19, Method: Composition-based stats. Identities = 40/212 (18%), Positives = 81/212 (38%), Gaps = 34/212 (16%) Query: 1 MKQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 + Y +F+ E + + N K Q+ N H K L+ Sbjct: 342 IDIYKRFRNEKNFQIMFKQ----NIIFSLQKLRQICNFP--------PNSYHSPKANRLK 389 Query: 61 VIIEKA--NAAPIIVAYHFNSD-----LARLQKAFPQGRT---------LDKDPCTIQEW 104 I+++ + +IV +F + L + PQ +K + Sbjct: 390 EIVKELTEDGEKVIVFSNFIQEGIGKIYKNLIEVLPQSSIVLYHGSLNQKEKQEAVKRFM 449 Query: 105 NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA 164 + + + G GL L + ++FF L W+ + Q +R+ + G +A Sbjct: 450 KDKNCMVFLGSITAAGEGLTLT-SSSYIIFFDLHWNPAKVWQAEDRV-----HRIGQTKA 503 Query: 165 VFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 V +Y + +NT++E ++Q+L K +I + L++ Sbjct: 504 VNIYNFVTKNTVEEKIIQKLEEKKSIINNLID 535 >gi|26353950|dbj|BAC40605.1| unnamed protein product [Mus musculus] Length = 594 Score = 98.1 bits (243), Expect = 7e-19, Method: Composition-based stats. Identities = 33/145 (22%), Positives = 57/145 (39%), Gaps = 26/145 (17%) Query: 69 APIIVAYHFNSDLA-----------------RLQKAFPQGRTLDKDPCTIQEWNEGKIPL 111 I++ S L RL + P G+ + + N+ I + Sbjct: 390 HRILIFCQLKSMLDIVEHDLLKPHLPSVTYLRLDGSIPPGQ---RHSIVSRFNNDPSIDV 446 Query: 112 LFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLI 171 L G GLNL G + +VF W+ Q ++R + G KR V VY LI Sbjct: 447 LLLTTHVGGLGLNLT-GADTVVFVEHDWNPMRDLQAMDR-----AHRIGQKRVVNVYRLI 500 Query: 172 AQNTIDELVLQRLRTKSTIQDLLLN 196 + T++E ++ + K I + +++ Sbjct: 501 TRGTLEEKIMGLQKFKMNIANTVIS 525 >gi|71034023|ref|XP_766653.1| ATP-dependent helicase [Theileria parva strain Muguga] gi|68353610|gb|EAN34370.1| ATP-dependent helicase, putative [Theileria parva] Length = 1632 Score = 98.1 bits (243), Expect = 7e-19, Method: Composition-based stats. Identities = 32/151 (21%), Positives = 64/151 (42%), Gaps = 17/151 (11%) Query: 65 KANAAPIIVAYHFNSDLARLQK----------AFPQGRTLDKDPCTIQEWNEG-KIPLLF 113 K+ I+ F+ L L+ +D I +NE KI L Sbjct: 1327 KSEEHRCIIYTQFSKMLDILENWINFMGFTYIRLDGSTKIDMRQKIINRFNENTKIFLFI 1386 Query: 114 AHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQ 173 + + G G+ L G + ++F+ W+ +Q ++R + G + V VY LI + Sbjct: 1387 SSTRTGGVGITLT-GADTVIFYDTDWNPAIDRQAMDRC-----HRIGQTKDVNVYRLITE 1440 Query: 174 NTIDELVLQRLRTKSTIQDLLLNALKKETIH 204 +T++E + ++ K + DL+++ + + H Sbjct: 1441 HTVEENIWRKQLQKRKLDDLIVDQGQFDIQH 1471 >gi|67541879|ref|XP_664707.1| hypothetical protein AN7103.2 [Aspergillus nidulans FGSC A4] gi|40742118|gb|EAA61308.1| hypothetical protein AN7103.2 [Aspergillus nidulans FGSC A4] gi|259483574|tpe|CBF79076.1| TPA: DNA repair protein Rhp26/Rad26, putative (AFU_orthologue; AFUA_4G03840) [Aspergillus nidulans FGSC A4] Length = 1193 Score = 98.1 bits (243), Expect = 7e-19, Method: Composition-based stats. Identities = 30/163 (18%), Positives = 59/163 (36%), Gaps = 20/163 (12%) Query: 53 DEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQK-----------AFPQGRTLDKDPC 99 K++ + ++E K ++ L L+K + Sbjct: 735 SGKMQVVRSLLELWKETGHKTLLFAQHRIMLDILEKFVKSLSGFNYRRMDGTTPIQHRQT 794 Query: 100 TIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQ 158 + E+N + + + G G+NL G + ++ + W+ Q ER + Sbjct: 795 MVDEFNKDPDLHVFLLTTKVGGLGVNLT-GADRVIIYDPDWNPSTDVQARERAW-----R 848 Query: 159 AGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 G KR V +Y L+ TI+E + R K + + +L K+ Sbjct: 849 LGQKRDVTIYRLMTAGTIEEKIYHRQIFKQFLTNKILKDPKQR 891 >gi|308808065|ref|XP_003081343.1| RA54B_CHICK DNA repair and recombination protein RAD54B (ISS) [Ostreococcus tauri] gi|116059805|emb|CAL55512.1| RA54B_CHICK DNA repair and recombination protein RAD54B (ISS) [Ostreococcus tauri] Length = 792 Score = 98.1 bits (243), Expect = 7e-19, Method: Composition-based stats. Identities = 45/191 (23%), Positives = 73/191 (38%), Gaps = 21/191 (10%) Query: 17 GENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEV-HDEKIKALEVIIEKA-NAAPIIVA 74 G+ +A + S +L N A E + K+ L + + I++ Sbjct: 501 GKTDDAISPLSAIQTLQKLCNAAALASEAHRDDPIETSSKLCVLRSMFRALPSDERIVIV 560 Query: 75 YHFNSDLARL---------QKAFPQGRTLDKDPCTI-QEWNE-GKIPLLFAHPASCGHGL 123 F + L + + QG T KD I +++N G+I L + G GL Sbjct: 561 SGFTTTLDLIALLCEGEKLKYDRLQGSTPPKDRTAIVRKFNTTGRI--LLLSTKAGGVGL 618 Query: 124 NLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQR 183 NL G N LV W+ Q RI + G + +Y L++ TI+E + QR Sbjct: 619 NL-VGANRLVLVDSSWNPAHDLQAQARIW-----REGQTKKCTIYRLLSTGTIEERMFQR 672 Query: 184 LRTKSTIQDLL 194 K ++ L Sbjct: 673 QELKGSLARTL 683 >gi|16198155|gb|AAL13882.1| LD35434p [Drosophila melanogaster] Length = 1207 Score = 98.1 bits (243), Expect = 7e-19, Method: Composition-based stats. Identities = 29/156 (18%), Positives = 63/156 (40%), Gaps = 19/156 (12%) Query: 55 KIKALEVIIEKA--NAAPIIVAYHFNSDLARLQ---------KAFPQGRTLDKDPCTI-Q 102 K++ ++ ++ + N +++ L L+ G T + + + Sbjct: 820 KLQTMDRLLRQLKVNGHRVLIFTQMTKMLDVLEAFLNYHGHIYLRLDGSTRVEQRQILME 879 Query: 103 EWNEGK-IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGF 161 +N K I S G G+NL G + ++F+ W+ Q +R + G Sbjct: 880 RFNGDKRIFCFILSTRSGGVGINLT-GADTVIFYDSDWNPTMDAQAQDRC-----HRIGQ 933 Query: 162 KRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 R V +Y L+++ TI+ +L++ K + D+ + Sbjct: 934 TRDVHIYRLVSERTIEVNILKKANQKRMLSDMAIEG 969 >gi|302767836|ref|XP_002967338.1| hypothetical protein SELMODRAFT_87168 [Selaginella moellendorffii] gi|300165329|gb|EFJ31937.1| hypothetical protein SELMODRAFT_87168 [Selaginella moellendorffii] Length = 545 Score = 98.1 bits (243), Expect = 7e-19, Method: Composition-based stats. Identities = 36/202 (17%), Positives = 76/202 (37%), Gaps = 19/202 (9%) Query: 7 FQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEV-HDEKIKALEVIIEK 65 F+ + DL E+ + V+ LQL D ++ +E+ K+KA +++ Sbjct: 325 FRVDEEDDLITEDGSGLKEMREAVRKLQLEAREKQEDFDRSVQEIGQSAKLKAALRVLDM 384 Query: 66 A-NAAPIIVAYHFNSDLARLQKAFPQGRT----------LDKDPCTIQEW-NEGKIPLLF 113 ++ + S L ++ K I+ + + + ++ Sbjct: 385 TPRGEKSLIFSQWTSMLNLIEPELEGAGIQFSRIDGSMSAGKRVAAIKRFSEDPDVVVML 444 Query: 114 AHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQ 173 + G GLNL + ++ +WW+ Q I+R + G R V V + + Sbjct: 445 ISLRAGGCGLNL-VAASRVLLMDMWWNPTTEDQAIDR-----THRIGQTRPVHVTRFVVK 498 Query: 174 NTIDELVLQRLRTKSTIQDLLL 195 T++E VL+ K + + + Sbjct: 499 QTVEEHVLEIQEKKKKLVEFVF 520 >gi|255724926|ref|XP_002547392.1| hypothetical protein CTRG_01699 [Candida tropicalis MYA-3404] gi|240135283|gb|EER34837.1| hypothetical protein CTRG_01699 [Candida tropicalis MYA-3404] Length = 1695 Score = 98.1 bits (243), Expect = 7e-19, Method: Composition-based stats. Identities = 30/166 (18%), Positives = 72/166 (43%), Gaps = 19/166 (11%) Query: 44 EEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAF---------PQGR 92 +K + K++ L +++ A+ ++ L L++ G Sbjct: 1408 PDKSLLQYDCGKLQRLATLLQDLTAHGHRALIFTQMTKVLDILEQFLNIHGYRYMRLDGA 1467 Query: 93 TLDKDPCTI-QEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 T +D + +++N + KIP+ S G G+NL G + ++F+ W+ +Q +R Sbjct: 1468 TKIEDRQLLTEKFNRDPKIPVFILSTRSGGLGINLT-GADTVIFYDSDWNPAMDKQCQDR 1526 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + G R V +Y +++ TI+ ++++ K + ++++ Sbjct: 1527 C-----HRIGQVRDVHIYRFVSEYTIESNIIKKANQKRQLDNVVIQ 1567 >gi|195570490|ref|XP_002103240.1| GD19063 [Drosophila simulans] gi|194199167|gb|EDX12743.1| GD19063 [Drosophila simulans] Length = 1403 Score = 98.1 bits (243), Expect = 7e-19, Method: Composition-based stats. Identities = 30/169 (17%), Positives = 66/169 (39%), Gaps = 29/169 (17%) Query: 52 HDEKIKALEVII---------EKANAAPIIVAYHFNSDLARLQK-------------AFP 89 H K+ AL+ ++ E + ++ + L +++ Sbjct: 1168 HSAKLPALKQLLLDCGIGVQTESVSQHRALIFCQLKAMLDIVEQDLLRRHLPSVTYLRLD 1227 Query: 90 QGRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMI 148 + + +N + I +L G GLNL G + ++F W+ + Q + Sbjct: 1228 GSVPASQRQDIVNNFNSDPSIDVLLLTTMVGGLGLNLT-GADTVIFVEHDWNPMKDLQAM 1286 Query: 149 ERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 +R + G K+ V VY LI +N+++E ++ + K + +++A Sbjct: 1287 DR-----AHRIGQKKVVNVYRLITRNSLEEKIMGLQKFKILTANTVVSA 1330 >gi|328703392|ref|XP_001951508.2| PREDICTED: helicase domino-like [Acyrthosiphon pisum] Length = 2483 Score = 98.1 bits (243), Expect = 7e-19, Method: Composition-based stats. Identities = 31/167 (18%), Positives = 66/167 (39%), Gaps = 19/167 (11%) Query: 44 EEKHWKEVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQ---------KAFPQGR 92 ++ + K+++L+ ++ + +++ L L+ G Sbjct: 1330 PDQRLIQYDCGKLQSLDYLLRELKTGHHRVLIFTQMTKMLDILEAFLNFHGYIYLRLDGT 1389 Query: 93 TLDKDPCTI-QEWNEGK-IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 T + + + +N K S G G+NL G + ++F+ W+ Q +R Sbjct: 1390 TKVETRQLLMERFNADKRYFCFILSTRSGGVGINLT-GADTVIFYDSDWNPTMDAQAQDR 1448 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + G R V +Y LI++ TI+E +L++ K + DL + Sbjct: 1449 C-----HRIGQTRDVHIYRLISEKTIEENILKKANQKRLLGDLAIEG 1490 >gi|326334483|ref|ZP_08200694.1| Snf2 family helicase [Capnocytophaga sp. oral taxon 338 str. F0234] gi|325693252|gb|EGD35180.1| Snf2 family helicase [Capnocytophaga sp. oral taxon 338 str. F0234] Length = 950 Score = 98.1 bits (243), Expect = 7e-19, Method: Composition-based stats. Identities = 33/211 (15%), Positives = 78/211 (36%), Gaps = 26/211 (12%) Query: 2 KQYHKFQ---RELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKA 58 K Y + + R + + N + Q++N D++ + K + Sbjct: 733 KWYEREKSKVRNKLLHIDNHSQT-LNILNMLTLLRQISNHPKLLDKQ---SSIPSGKYEE 788 Query: 59 LEVIIEKA--NAAPIIVAYHFNSDLAR---------LQKAFPQGRT-LDKDPCTIQEWNE 106 + ++E+ + ++ F S L ++ G T + + ++ + + Sbjct: 789 VINLLEQLLLSQHKALIFSSFISHLEIYEDWCKTNNIKFTTLTGDTPIPERKIQVESFQK 848 Query: 107 GK-IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 K I F + GLNL + ++ WW+ +Q I R + G + V Sbjct: 849 DKDIMFFFISLKAGEVGLNLTT-ASYVLLLDPWWNPFAERQAIAR-----AHRLGQQHKV 902 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 V + Q+T++E ++ + K + + ++ Sbjct: 903 TVIRFVTQDTLEEKIIHLQQNKKELSENIIE 933 >gi|209875623|ref|XP_002139254.1| SNF2 family N-terminal domain-containing protein [Cryptosporidium muris RN66] gi|209554860|gb|EEA04905.1| SNF2 family N-terminal domain-containing protein [Cryptosporidium muris RN66] Length = 1071 Score = 98.1 bits (243), Expect = 7e-19, Method: Composition-based stats. Identities = 38/214 (17%), Positives = 85/214 (39%), Gaps = 30/214 (14%) Query: 6 KFQRELYCDLQGENIEA----FNSASKTVKCLQLANGAVYYDE-------EKHWK-EVHD 53 + + ++ + + ++ + Q A G +Y E +WK ++ Sbjct: 843 EMEMHQIKEINKGEVNKNLLQISKTTQLPEQSQQAKGVIYEREYSLIDTSGTYWKPTIYS 902 Query: 54 EKIKALEVII--EKANAAPIIVAYHFNSDLARLQ----------KAFPQGRTLDKDPCTI 101 KI+ L + + + +++ + S L ++ + ++ K I Sbjct: 903 TKIRTLLEYLHKDINDNQKVVIFSQWTSFLDIIEMALNCHSFNFRRLDGSISMSKRGSII 962 Query: 102 QEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGF 161 ++E K +L + G GLNL + LWW+ +Q ++RI + G Sbjct: 963 SWFSESKQKILLVSIKAGGVGLNL-VAATRVYLTDLWWNPAVEEQALQRI-----YRLGQ 1016 Query: 162 KRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 + V +Y ++ + +++E +LQ + KS I +L Sbjct: 1017 TKTVHMYRIVCRKSVEERILQLHQLKSDISSKIL 1050 >gi|303275450|ref|XP_003057019.1| SNF2 super family [Micromonas pusilla CCMP1545] gi|226461371|gb|EEH58664.1| SNF2 super family [Micromonas pusilla CCMP1545] Length = 665 Score = 98.1 bits (243), Expect = 7e-19, Method: Composition-based stats. Identities = 32/148 (21%), Positives = 59/148 (39%), Gaps = 18/148 (12%) Query: 65 KANAAPIIVAYHFNSDLARLQK----------AFPQGRTLDKDPCTIQEWNEGK-IPLLF 113 +AN +++ L L+K G + + ++N + + Sbjct: 496 RANDK-VLLFSKSTRLLDILEKFLSRRGYVYCRLDGGTAQNARQPLVDDFNNSSSMFVFL 554 Query: 114 AHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQ 173 + G GLN+ N +V F W+ Q R + G +R V VY IA Sbjct: 555 LSTKAGGVGLNIT-SANRVVVFDPDWNPALDLQA-----QDRAYRIGQRRDVNVYRFIAA 608 Query: 174 NTIDELVLQRLRTKSTIQDLLLNALKKE 201 +TI+E+V QR K ++ ++A+++ Sbjct: 609 DTIEEIVYQRQVYKQQQSNVAVDAVRER 636 >gi|190345483|gb|EDK37379.2| hypothetical protein PGUG_01477 [Meyerozyma guilliermondii ATCC 6260] Length = 1895 Score = 98.1 bits (243), Expect = 7e-19, Method: Composition-based stats. Identities = 39/200 (19%), Positives = 79/200 (39%), Gaps = 21/200 (10%) Query: 12 YCDLQGENIEAFNSASKTVKCLQLANGA-VYYDEEKHWKEVHDEKIKALEVIIEKANAAP 70 Y + +I + N A K + L + D+ + + ++K + + Sbjct: 1620 YLRINKSDIRSINHAPKLLSLRTLLLECGIGVDDSDYIGKGKNKKSQQQITAEGVISDHR 1679 Query: 71 IIVAYHFNSDLARLQKAFPQ------------GRTLDKDPCTI-QEWNE-GKIPLLFAHP 116 ++ L ++ + G T +D +I +++NE I +L Sbjct: 1680 ALIFCQLKDMLDIVENELLKKHLPSVTYMRLDGSTDPRDRQSIVRKFNEDPSIDVLLLTT 1739 Query: 117 ASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTI 176 G GLNL G + ++F W+ Q ++R + G K+ V VY LI ++T+ Sbjct: 1740 KVGGLGLNLT-GADTVIFVEHDWNPMNDLQAMDR-----AHRLGQKKVVNVYRLITKHTL 1793 Query: 177 DELVLQRLRTKSTIQDLLLN 196 +E ++ + K I ++N Sbjct: 1794 EEKIMGLQKFKMNIASTVVN 1813 >gi|110738692|dbj|BAF01271.1| putative chromodomain-helicase-DNA-binding protein [Arabidopsis thaliana] Length = 966 Score = 98.1 bits (243), Expect = 7e-19, Method: Composition-based stats. Identities = 34/181 (18%), Positives = 71/181 (39%), Gaps = 22/181 (12%) Query: 39 AVYYDEEKHWKEVHDE--KIKALEVIIEKA--NAAPIIVAYHFNSDLARL---------Q 85 V +D + +K++ + K++ L+ ++ K +++ F L L Q Sbjct: 160 PVIHDANEAFKQLLESCGKLQLLDKMMVKLKEQGHRVLIYTQFQHMLDLLEDYCTHKKWQ 219 Query: 86 KAFPQGRTLDKDPCT-IQEWN--EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLE 142 G+ + I +N + G G+NL + ++ + W+ Sbjct: 220 YERIDGKVGGAERQIRIDRFNAKNSNKFCFLLSTRAGGLGINL-ATADTVIIYDSDWNPH 278 Query: 143 EHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKET 202 Q + R + G V +Y LI + TI+E ++Q + K ++ L++ LK + Sbjct: 279 ADLQAMAR-----AHRLGQTNKVMIYRLINRGTIEERMMQLTKKKMVLEHLVVGKLKTQN 333 Query: 203 I 203 I Sbjct: 334 I 334 >gi|149248584|ref|XP_001528679.1| DNA repair protein RAD5 [Lodderomyces elongisporus NRRL YB-4239] gi|146448633|gb|EDK43021.1| DNA repair protein RAD5 [Lodderomyces elongisporus NRRL YB-4239] Length = 1241 Score = 98.1 bits (243), Expect = 7e-19, Method: Composition-based stats. Identities = 35/167 (20%), Positives = 61/167 (36%), Gaps = 22/167 (13%) Query: 40 VYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQ------------KA 87 +Y + I+ L+++ E++ +IV F+S L ++ Sbjct: 1056 IYLYDPNRSSSKIQALIRHLKLLQEQSPNLKVIVFSQFSSYLDIMETELKLTSDEFHVYK 1115 Query: 88 FPQGRTLDKDPCTIQEWN----EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEE 143 F ++ + +N GKI +L + G GLNL + WW Sbjct: 1116 FDGRLNMNDRSKLLAAFNAPVTSGKISILLLSLKAGGVGLNLTT-ASRAFMMDPWWSPSI 1174 Query: 144 HQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 Q I+RI + G V V I +N+I+ +L+ K I Sbjct: 1175 EDQAIDRI-----HRIGQNDTVKVVRFIMENSIETKMLKIQERKKQI 1216 >gi|323455077|gb|EGB10946.1| hypothetical protein AURANDRAFT_62321 [Aureococcus anophagefferens] Length = 1218 Score = 98.1 bits (243), Expect = 7e-19, Method: Composition-based stats. Identities = 30/163 (18%), Positives = 66/163 (40%), Gaps = 24/163 (14%) Query: 55 KIKALEVIIEKAN--AAPIIVAYHFNSDLARLQKAF---------PQGRTLDK-DPCTIQ 102 K+ L+ ++ + +++ L L+ G+T + I Sbjct: 442 KLVLLDKLLTRLKDKGHRVLIFSQMTRMLDILEDFMVMRAYDYCRIDGKTAHELREEYID 501 Query: 103 EWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 +N + + G G+NLQ + V + W+ + Q ++R + G Sbjct: 502 AYNAPNSEKFAFLLSTRAGGLGINLQT-ADTCVLYDSDWNPQADLQAMDRC-----HRIG 555 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTIQ----DLLLNALK 199 + V VY L+ +++++E V++R + K + D LL+A++ Sbjct: 556 QTKPVHVYRLVTEHSVEEKVVERAQQKLKLDAVVTDELLHAVR 598 >gi|213406021|ref|XP_002173782.1| ATP-dependent helicase RIS1 [Schizosaccharomyces japonicus yFS275] gi|212001829|gb|EEB07489.1| ATP-dependent helicase RIS1 [Schizosaccharomyces japonicus yFS275] Length = 867 Score = 98.1 bits (243), Expect = 7e-19, Method: Composition-based stats. Identities = 29/160 (18%), Positives = 60/160 (37%), Gaps = 21/160 (13%) Query: 51 VHDEKIKALEVII----EKANAAPIIVAYHFNSDLARL----QKAFPQGRTLD------- 95 V KI++ ++ + I++ F L L Q+ + D Sbjct: 692 VPSSKIQSAIELVRRIRTEQPGEKILIFSQFTQFLELLSVPLQREGIRFVVYDGSMSASQ 751 Query: 96 KDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTR 155 +D + ++ + ++ + GLNL N +V +++ +Q I+R Sbjct: 752 RDEAIHRFQHKESVQVMLVSLKAGSTGLNLT-AANHVVLLDPFYNPSVEEQAIDR----- 805 Query: 156 QRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 + G KR V VY +I ++I+E + K + + Sbjct: 806 AYRIGQKREVHVYRMITADSIEERIAALQEKKRGLVRSAM 845 >gi|15242960|ref|NP_197667.1| RAD5; ATP binding / ATP-dependent helicase/ DNA binding / helicase/ hydrolase, acting on acid anhydrides, in phosphorus-containing anhydrides / nucleic acid binding / protein binding / zinc ion binding [Arabidopsis thaliana] gi|60390961|sp|Q9FNI6|SM3L2_ARATH RecName: Full=Putative SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 3-like 2; Short=SMARCA3-like protein 2 gi|10178249|dbj|BAB11681.1| DNA repair protein RAD5 protein [Arabidopsis thaliana] gi|110737306|dbj|BAF00599.1| hypothetical protein [Arabidopsis thaliana] gi|332005687|gb|AED93070.1| DNA/RNA helicase protein RAD5 [Arabidopsis thaliana] Length = 1029 Score = 98.1 bits (243), Expect = 7e-19, Method: Composition-based stats. Identities = 37/160 (23%), Positives = 64/160 (40%), Gaps = 21/160 (13%) Query: 42 YDEEKHWKEVHDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQ-----KAFPQGRT- 93 D EK+W E KI AL +E +++ + I+ + + L LQ F R Sbjct: 853 VDVEKNWVE--SSKITALLEELEGLRSSGSKSILFSQWTAFLDLLQIPLSRNNFSFVRLD 910 Query: 94 ----LDKDPCTIQEW-NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMI 148 + ++E+ +G I +L + G G+NL N V WW+ +Q + Sbjct: 911 GTLSQQQREKVLKEFSEDGSILVLLMSLKAGGVGINLTAASNAFVM-DPWWNPAVEEQAV 969 Query: 149 ERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKS 188 RI + G + V + I + T++E + K Sbjct: 970 MRI-----HRIGQTKEVKIRRFIVKGTVEERMEAVQARKQ 1004 >gi|322707430|gb|EFY99008.1| DNA repair and recombination protein RAD5B [Metarhizium anisopliae ARSEF 23] Length = 769 Score = 97.7 bits (242), Expect = 7e-19, Method: Composition-based stats. Identities = 31/167 (18%), Positives = 62/167 (37%), Gaps = 20/167 (11%) Query: 53 DEKIKALEVIIEKA---NAAPIIVAYHFNSDLARLQKAFPQGRTL-----------DKDP 98 K +A+ I++ + + +++ + S L +Q +D Sbjct: 596 SSKTEAMMQILQATLKKDGSKVVIFSQWTSFLNIIQNQLDIAGIKYSRIDGSMNTEKRDR 655 Query: 99 CTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQ 158 N+ + ++ A A C GLNL + ++ WW Q I+R+ + Sbjct: 656 AVRALDNDAETRVMLASLAVCSVGLNL-VSADTVILSDSWWAPAIEDQAIDRV-----HR 709 Query: 159 AGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIHV 205 G R V+ LI + T++E VL + K + +++ H Sbjct: 710 LGQTRKTTVWRLIVEGTVEERVLDVQKEKRDLVTKAFQEKERKGKHT 756 >gi|307211542|gb|EFN87620.1| Chromatin-remodeling complex ATPase chain Iswi [Harpegnathos saltator] Length = 1008 Score = 97.7 bits (242), Expect = 7e-19, Method: Composition-based stats. Identities = 47/230 (20%), Positives = 90/230 (39%), Gaps = 40/230 (17%) Query: 1 MKQY---HKFQRELYCDLQGENIEAFNSASKTVK------CLQL---ANGAVYYD--EEK 46 +K Y K QRE Y + ++I+ N A K K +QL N +D E Sbjct: 360 IKVYIGLSKMQREWYTKVLMKDIDIVNGAGKIEKMRLQNILMQLRKCCNHPYLFDGAEPG 419 Query: 47 HWKEVHDE------KIKALEVIIEKAN--AAPIIVAYHFNSDLARL---------QKAFP 89 + K+ L+ ++ K + ++V L L Q Sbjct: 420 PPYTTDEHLVYNCGKMVILDKLLPKLQQQESRVLVFSQMTRMLDILEDYCHWRCFQYCRL 479 Query: 90 QGRTLDKDPC-TIQEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 G T +D I E+N + + + G G+NL ++++ + W+ + Q Sbjct: 480 DGNTAHEDRQRQINEYNAPGSEKFIFMLSTRAGGLGINL-ATADVVIIYDSDWNPQMDLQ 538 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 ++R + G ++ V V+ I +NT++E +++R K + L++ Sbjct: 539 AMDR-----AHRIGQQKQVRVFRFITENTVEEKIVERAEVKLRLDKLVIQ 583 >gi|220907028|ref|YP_002482339.1| Non-specific serine/threonine protein kinase [Cyanothece sp. PCC 7425] gi|219863639|gb|ACL43978.1| Non-specific serine/threonine protein kinase [Cyanothece sp. PCC 7425] Length = 1112 Score = 97.7 bits (242), Expect = 7e-19, Method: Composition-based stats. Identities = 34/215 (15%), Positives = 70/215 (32%), Gaps = 25/215 (11%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASK--TVKCLQLANGAVYYDEEKHWKEVH--DEKIK 57 Y ++ + K Q+ N + +++ K+K Sbjct: 875 ALYEATVQDSLAAISAAAGIQRRGLILATLTKLKQICNHPAQLLRQTSLQDLPHRSGKLK 934 Query: 58 --ALEVIIEKANAAPIIVAYHFNSDLARLQ----------KAFPQGRT-LDKDPCTIQEW 104 + A ++ F LQ F G T + + + Sbjct: 935 RLEEMLEEALAEGDRALIFSQFAEMGKLLQLYLREQLGWETLFLSGSTPKPQREAMVDRF 994 Query: 105 NEGKI--PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFK 162 + + + G GLNL N + F WW+ Q +R+ + G K Sbjct: 995 QQDPQGPRIFILSLKAGGVGLNLTR-ANHVFHFDRWWNPAVENQATDRVF-----RIGQK 1048 Query: 163 RAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 R V V+ ++ T++E + ++L +K + + ++ A Sbjct: 1049 RNVQVHKFVSTGTLEEKIHEQLESKKALAEQVVGA 1083 >gi|146414908|ref|XP_001483424.1| hypothetical protein PGUG_04153 [Meyerozyma guilliermondii ATCC 6260] Length = 990 Score = 97.7 bits (242), Expect = 7e-19, Method: Composition-based stats. Identities = 44/231 (19%), Positives = 91/231 (39%), Gaps = 38/231 (16%) Query: 6 KFQRELYCDLQGENIEAFNSASK----------TVKCLQLANGAVYYD--EEKHWKEVHD 53 QR Y + ++I+A N A+K ++ + N ++ E + Sbjct: 373 DMQRSWYQKILEKDIDAVNGANKKESKTRLLNIVMQLRKCCNHPYLFEGAEPGPPFTTDE 432 Query: 54 E------KIKALEVIIE--KANAAPIIVAYHFNSDLARL---------QKAFPQGRTLDK 96 K+K L+ +++ ++ + +++ + L L Q G+T Sbjct: 433 HLVYNAEKMKILDQLLKKFQSEGSRVLIFSQMSRMLDILEDYCAFREFQYCRIDGQTDHA 492 Query: 97 DP-CTIQEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGV 153 D I E+N+ + + + G G+NL +I++ F W+ + Q ++R Sbjct: 493 DRVNAIDEYNKPGSEKFVFLLTTRAGGLGINLT-SADIVILFDSDWNPQADLQAMDR--- 548 Query: 154 TRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIH 204 + G + V V+ I +N I+E VL+R K + L++ + I Sbjct: 549 --AHRIGQTKQVKVFRFITENAIEEKVLERAAQKLRLDQLVIQQGRNSNIG 597 >gi|24583161|ref|NP_609320.2| CG5899, isoform A [Drosophila melanogaster] gi|7297570|gb|AAF52824.1| CG5899, isoform A [Drosophila melanogaster] Length = 844 Score = 97.7 bits (242), Expect = 7e-19, Method: Composition-based stats. Identities = 28/149 (18%), Positives = 59/149 (39%), Gaps = 17/149 (11%) Query: 65 KANAAPIIVAYHFNSDLA------RLQK----AFPQGRTLDKDPCTIQEWNEGK-IPLLF 113 KA +++ F L R++K ++ I ++N I + Sbjct: 665 KAEGHRVLLFSQFTMMLDIVEEYLRIRKFGFCRLDGATAVNVRQDLITDFNGDDSIFVFL 724 Query: 114 AHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQ 173 + G G+NL ++ + ++ +Q +R + G +R V +Y LI++ Sbjct: 725 LSTKAGGVGINLTAADTCVIH-DIDFNPYNDKQAEDRC-----HRMGQQRPVTIYRLISE 778 Query: 174 NTIDELVLQRLRTKSTIQDLLLNALKKET 202 +TI+E +L K ++ + + K E Sbjct: 779 STIEEGILMAAEEKLKLEKDITSNEKGEV 807 >gi|194382816|dbj|BAG64578.1| unnamed protein product [Homo sapiens] Length = 677 Score = 97.7 bits (242), Expect = 7e-19, Method: Composition-based stats. Identities = 33/145 (22%), Positives = 57/145 (39%), Gaps = 26/145 (17%) Query: 69 APIIVAYHFNSDLA-----------------RLQKAFPQGRTLDKDPCTIQEWNEGKIPL 111 I++ S L RL + P G+ + + N+ I + Sbjct: 473 HRILIFCQLKSMLDIVEHDLLKPHLPSVTYLRLDGSIPPGQ---RHSIVSRFNNDPSIDV 529 Query: 112 LFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLI 171 L G GLNL G + +VF W+ Q ++R + G KR V VY LI Sbjct: 530 LLLTTHVGGLGLNLT-GADTVVFVEHDWNPMRDLQAMDR-----AHRIGQKRVVNVYRLI 583 Query: 172 AQNTIDELVLQRLRTKSTIQDLLLN 196 + T++E ++ + K I + +++ Sbjct: 584 TRGTLEEKIMGLQKFKMNIANTVIS 608 >gi|290998113|ref|XP_002681625.1| predicted protein [Naegleria gruberi] gi|284095250|gb|EFC48881.1| predicted protein [Naegleria gruberi] Length = 489 Score = 97.7 bits (242), Expect = 8e-19, Method: Composition-based stats. Identities = 30/157 (19%), Positives = 62/157 (39%), Gaps = 18/157 (11%) Query: 52 HDEKIKALEVIIEKAN-AAPIIVAYHFNSDLARLQKAFPQG-----------RTLDKDPC 99 KI AL + +V + S L ++ A + + D+D Sbjct: 251 SSSKIGALIEKLRVLELGTKSVVFSQWTSMLDLVEVALEKSNIKFVRLDGKMQRKDRDDA 310 Query: 100 TIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQA 159 + + I + G GLNL + + + WW+ +Q I+R+ + Sbjct: 311 VQKFKFDPHIQVCLISLKVGGTGLNLVWATH-VFLLDPWWNPAIEEQAIDRV-----HRI 364 Query: 160 GFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 G + V V+ + +++++E +L ++K+ I + LN Sbjct: 365 GQDKPVTVFRFVVKDSVEERILSLQKSKTKIANEALN 401 >gi|145610651|ref|XP_368232.2| hypothetical protein MGG_01012 [Magnaporthe oryzae 70-15] gi|145018030|gb|EDK02309.1| hypothetical protein MGG_01012 [Magnaporthe oryzae 70-15] Length = 1111 Score = 97.7 bits (242), Expect = 8e-19, Method: Composition-based stats. Identities = 43/226 (19%), Positives = 87/226 (38%), Gaps = 43/226 (19%) Query: 6 KFQRELYCDLQGENIEAFNSAS--------KTVKCLQLAN-------------GAVYYDE 44 + QR Y + ++I+A N A+ +QL G Y + Sbjct: 423 EMQRTWYQKILEKDIDAVNGANGKRESKTRLLNIVMQLRKCCNHPYLFEGAEPGPPYTTD 482 Query: 45 EKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQK----------AFPQGR 92 E + K+ L+ ++++ A + +++ + L L+ G Sbjct: 483 EHLV--YNSGKMVVLDKLLKRLKAQGSRVLIFSQMSRVLDILEDYCVFREYKYSRIDGGT 540 Query: 93 TLDKDPCTIQEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 + I E+N+ + + + G G+NL +I++ F W+ + Q ++R Sbjct: 541 AHEDRIAAIDEYNKPGSEKFVFLLTTRAGGLGINLTT-ADIVILFDSDWNPQADLQAMDR 599 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + G + V+VY + NTI+E VL+R K + L++ Sbjct: 600 -----AHRIGQTKQVYVYRFLVDNTIEEKVLERAAQKLHLDRLVIQ 640 >gi|169607597|ref|XP_001797218.1| hypothetical protein SNOG_06857 [Phaeosphaeria nodorum SN15] gi|160701447|gb|EAT85508.2| hypothetical protein SNOG_06857 [Phaeosphaeria nodorum SN15] Length = 1249 Score = 97.7 bits (242), Expect = 8e-19, Method: Composition-based stats. Identities = 31/162 (19%), Positives = 59/162 (36%), Gaps = 20/162 (12%) Query: 43 DEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQ----------KAFPQ 90 DE K+ L+ ++ K A+ +++ L L + Sbjct: 420 DETLKALITTSGKMMLLDRLLTKLKADGHRVLIFSQMVHMLDILTDYLKLRNYTYQRLDG 479 Query: 91 GRTLDKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMI 148 I +N + G G+NL + +V F W+ + Q + Sbjct: 480 TVPASDRKIAIDHFNAPGSDDYCFLLSTRAGGLGINLMT-ADTVVIFDSDWNPQADLQAM 538 Query: 149 ERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 R + G ++ V VY L++++TI+E +L+R R K + Sbjct: 539 AR-----AHRIGQQKPVSVYRLVSKDTIEEEILERARNKRML 575 >gi|62087266|dbj|BAD92080.1| BTAF1 RNA polymerase II, B-TFIID transcription factor-associated, 170kDa variant [Homo sapiens] Length = 699 Score = 97.7 bits (242), Expect = 8e-19, Method: Composition-based stats. Identities = 33/145 (22%), Positives = 57/145 (39%), Gaps = 26/145 (17%) Query: 69 APIIVAYHFNSDLA-----------------RLQKAFPQGRTLDKDPCTIQEWNEGKIPL 111 I++ S L RL + P G+ + + N+ I + Sbjct: 495 HRILIFCQLKSMLDIVEHDLLKPHLPSVTYLRLDGSIPPGQ---RHSIVSRFNNDPSIDV 551 Query: 112 LFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLI 171 L G GLNL G + +VF W+ Q ++R + G KR V VY LI Sbjct: 552 LLLTTHVGGLGLNLT-GADTVVFVEHDWNPMRDLQAMDR-----AHRIGQKRVVNVYRLI 605 Query: 172 AQNTIDELVLQRLRTKSTIQDLLLN 196 + T++E ++ + K I + +++ Sbjct: 606 TRGTLEEKIMGLQKFKMNIANTVIS 630 >gi|145355576|ref|XP_001422035.1| predicted protein [Ostreococcus lucimarinus CCE9901] gi|144582274|gb|ABP00329.1| predicted protein [Ostreococcus lucimarinus CCE9901] Length = 589 Score = 97.7 bits (242), Expect = 8e-19, Method: Composition-based stats. Identities = 29/154 (18%), Positives = 65/154 (42%), Gaps = 19/154 (12%) Query: 55 KIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRT----------LDKDPCTIQ 102 K++ L+ ++ + A +++ L L+ F Q D I Sbjct: 354 KMQLLDRLMTRLRARGHKVLIFSQMTRMLDLLESFFQQRGEPVCRIDGSVKQDDRREFIA 413 Query: 103 EWNE-GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGF 161 +NE K + + G G+NL GG+ ++ + W+ + Q ++R+ + G Sbjct: 414 RFNEDPKYGIFLLSTRAGGLGINLT-GGDTVIIYDSDWNPHQDLQAMDRV-----HRIGQ 467 Query: 162 KRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 + V VY L +++ +L++ +K ++ L++ Sbjct: 468 TKPVHVYRLATAKSVEGKMLKKAASKLALEKLVV 501 >gi|212533393|ref|XP_002146853.1| dsDNA-dependent ATPase (Rad54b), putative [Penicillium marneffei ATCC 18224] gi|210072217|gb|EEA26306.1| dsDNA-dependent ATPase (Rad54b), putative [Penicillium marneffei ATCC 18224] Length = 1054 Score = 97.7 bits (242), Expect = 8e-19, Method: Composition-based stats. Identities = 33/161 (20%), Positives = 63/161 (39%), Gaps = 27/161 (16%) Query: 54 EKIKALEVIIEKANAAPIIVAYHFNSDLA--------------RLQKAFPQGRTLDKDPC 99 + L ++ + I++ ++ S L RL + P K Sbjct: 651 RVLDQLLHNLQTTTSEKIVLVSNYTSTLNLLGILLTSLSLPFLRLDGSTPSA----KRQS 706 Query: 100 TIQEWNEG---KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 + ++N K + G GLNL G + LV F + W+ Q + RI Sbjct: 707 LVDDFNRAPASKCFAFLLSAKAGGTGLNLT-GASRLVLFDVDWNPATDLQAMARI----- 760 Query: 157 RQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + G KR ++Y ++ + ++E + QR TK + D ++ + Sbjct: 761 HRDGQKRHCYIYRIMLKGALEEKIWQRQVTKIGLADSVMES 801 >gi|50310019|ref|XP_455023.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140] gi|49644158|emb|CAH00110.1| KLLA0E23717p [Kluyveromyces lactis] Length = 1873 Score = 97.7 bits (242), Expect = 8e-19, Method: Composition-based stats. Identities = 39/183 (21%), Positives = 72/183 (39%), Gaps = 28/183 (15%) Query: 28 KTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLA----- 82 + +K L L G D EK + ++ +I + +++ L Sbjct: 1627 EALKTLLLECGIGIQDVEKKSNKNPS-----IDNVISQ---HRVLIFCQLKDMLDMVEND 1678 Query: 83 RLQKAFP-------QGRTLDKDPC-TIQEWNE-GKIPLLFAHPASCGHGLNLQYGGNILV 133 L+K P G +D ++++NE I L G GLNL G + ++ Sbjct: 1679 LLKKHLPSVTFMRLDGSVDSRDRQKVVRKFNEDPSIDCLLLTTKVGGLGLNLT-GADTVI 1737 Query: 134 FFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDL 193 F W+ Q ++R + G K+ V VY +I + T++E ++ + K I Sbjct: 1738 FVEHDWNPMNDLQAMDR-----AHRLGQKKVVNVYRIITKGTLEEKIMGLQKFKMNIAST 1792 Query: 194 LLN 196 ++N Sbjct: 1793 IVN 1795 >gi|323454081|gb|EGB09951.1| hypothetical protein AURANDRAFT_36628 [Aureococcus anophagefferens] Length = 712 Score = 97.7 bits (242), Expect = 8e-19, Method: Composition-based stats. Identities = 39/186 (20%), Positives = 71/186 (38%), Gaps = 31/186 (16%) Query: 27 SKTVKCLQL----ANGAVYYDEEKHWKEVH-------DEKIKALEVIIEKA--NAAPIIV 73 S +QL + ++ D E E K++ L+ ++ K N ++V Sbjct: 497 SLLNLLMQLRKTCCHPFLFPDAEGDPDETTLEELVAASGKLRVLDRLLLKLHRNGHRVVV 556 Query: 74 AYHFNSDLA------RLQK----AFPQGRTLDKDPCTIQEWNEGKIP--LLFAHPASCGH 121 F+S + RL+ + ++ +NE P + + G Sbjct: 557 FSQFSSMVDILDDYCRLRGWSFCRLTGATNRVRRVVNVRAFNEPSSPLFIFLMTTRAGGL 616 Query: 122 GLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVL 181 G+NLQ + V + W+ + Q + R+ + G + V +Y L A T +E VL Sbjct: 617 GINLQ-SADTCVLYDSDWNPQADLQAMARV-----HRLGQTKTVHIYRLCAAGTAEERVL 670 Query: 182 QRLRTK 187 QR + K Sbjct: 671 QRSQKK 676 >gi|317127485|ref|YP_004093767.1| SNF2-related protein [Bacillus cellulosilyticus DSM 2522] gi|315472433|gb|ADU29036.1| SNF2-related protein [Bacillus cellulosilyticus DSM 2522] Length = 1093 Score = 97.7 bits (242), Expect = 8e-19, Method: Composition-based stats. Identities = 33/183 (18%), Positives = 69/183 (37%), Gaps = 21/183 (11%) Query: 26 ASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLAR 83 + + Q+ + + K++ L +E+A + +++ F L+ Sbjct: 900 LAGLTRLRQICCHPALFMTN---YKGQSGKMERLFEYLEEAIASGRRVVLFSQFTQMLSI 956 Query: 84 LQKAFP---------QGRTLDKDPCTI-QEWNEGKIPLLFAHPASCGHGLNLQYGGNILV 133 +Q G T K+ + ++N G+ L + G GG+ ++ Sbjct: 957 IQDRLKGYGWQYHYLDGSTPSKERVELANQFNNGEKELFLVSLKAGGT-GLNLTGGDTVI 1015 Query: 134 FFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDL 193 F WW+ +Q +R+ + G K+ V V LI TI+E + + K + D Sbjct: 1016 LFDSWWNPAVEEQAADRV-----YRFGQKKVVQVTKLITTGTIEEKIHKLQGQKRELLDK 1070 Query: 194 LLN 196 ++ Sbjct: 1071 VIQ 1073 >gi|260941370|ref|XP_002614851.1| hypothetical protein CLUG_04866 [Clavispora lusitaniae ATCC 42720] gi|238851274|gb|EEQ40738.1| hypothetical protein CLUG_04866 [Clavispora lusitaniae ATCC 42720] Length = 885 Score = 97.7 bits (242), Expect = 8e-19, Method: Composition-based stats. Identities = 39/185 (21%), Positives = 69/185 (37%), Gaps = 24/185 (12%) Query: 14 DLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIV 73 +L + + + SK + L E+ + + + LE ++ K N Sbjct: 617 ELSSSPLSSRTTGSKVNVLVPLLLEFRTVGEKVVLVSNYAQTLDFLETVLSKLN------ 670 Query: 74 AYHFNSDLARLQKAFPQGRTLDK-DPCTIQEWNE-GKIPLLFAHPASCGHGLNLQYGGNI 131 LQ G T K + ++N+ + + G GLNL G + Sbjct: 671 ----------LQYCRLDGSTPAKVRDKLVLDFNKCPTHKIFLLSAKAGGVGLNL-VGASR 719 Query: 132 LVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQ 191 L+ F W+ Q + R+ + G + VF+Y L IDE + QR K+ + Sbjct: 720 LILFDNDWNPSVDLQAMARV-----HRYGQTKPVFIYRLFTTGAIDEKIFQRQLMKNNLS 774 Query: 192 DLLLN 196 D+ L+ Sbjct: 775 DMFLD 779 >gi|171687146|ref|XP_001908514.1| hypothetical protein [Podospora anserina S mat+] gi|170943534|emb|CAP69187.1| unnamed protein product [Podospora anserina S mat+] Length = 1197 Score = 97.7 bits (242), Expect = 8e-19, Method: Composition-based stats. Identities = 38/159 (23%), Positives = 62/159 (38%), Gaps = 20/159 (12%) Query: 46 KHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTI--QE 103 H + + + L IIE F L ++ G+T K T+ Q Sbjct: 768 GHKTLLFSQGTQML-DIIEA-----------FVQRLDDVRYLRMDGKTPIKQRQTLVDQF 815 Query: 104 WNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKR 163 N+ + + G G+NL G N ++ F W+ Q ER + G KR Sbjct: 816 NNDPSLDVFLLTTKVGGLGVNLT-GANRVIIFDPDWNPSTDVQARERAW-----RLGQKR 869 Query: 164 AVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKET 202 V +Y L+ TI+E + R K + + +L K++T Sbjct: 870 EVTIYRLMTAGTIEEKIYHRQIFKQFLSNKVLKDPKQQT 908 >gi|317159396|ref|XP_001827279.2| hypothetical protein AOR_1_1414024 [Aspergillus oryzae RIB40] Length = 1090 Score = 97.7 bits (242), Expect = 8e-19, Method: Composition-based stats. Identities = 27/165 (16%), Positives = 63/165 (38%), Gaps = 25/165 (15%) Query: 51 VHDEKIK-ALE---VIIEKAN----AAPIIVAYHFNSDLARL-----------QKAFPQG 91 + KI ALE I+ + +++ F S L + ++ Sbjct: 873 ISSSKIDRALEIVRDIVARGEPGGEREKVVIFSQFTSMLDLIEVPLARHGWAFRRYDGTM 932 Query: 92 RTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERI 151 + D+ T+ + +L + GLNL +++ +W+ Q + R+ Sbjct: 933 KPADRHAATVHFATDPDCLILLVSMKAGNSGLNLTAASQVIIL-DPFWNPYVEDQAVGRV 991 Query: 152 GVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + G +R V V+ ++ NT+++ +L K + + +++ Sbjct: 992 -----HRIGQRRPVHVHRILVSNTVEDRILDFQDRKRQLIEGIVD 1031 >gi|302803682|ref|XP_002983594.1| hypothetical protein SELMODRAFT_180307 [Selaginella moellendorffii] gi|300148837|gb|EFJ15495.1| hypothetical protein SELMODRAFT_180307 [Selaginella moellendorffii] Length = 364 Score = 97.7 bits (242), Expect = 8e-19, Method: Composition-based stats. Identities = 31/160 (19%), Positives = 63/160 (39%), Gaps = 19/160 (11%) Query: 42 YDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTL------- 94 + E+ WKE K++AL +E + +V + + L L+ + Sbjct: 190 VNVEEQWKE--SSKVEALLQQLETLRESKSVVFSQWTAFLDLLEIPLKRKNVRFVRLDGT 247 Query: 95 ---DKDPCTIQEW-NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 K ++++ N + ++ + G GLNL N + WW+ +Q I R Sbjct: 248 LSQHKREQVLKDFSNIPDVAVMLISLKAGGVGLNLTAASNAFLM-DPWWNPAVEEQAIMR 306 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 I + G + V + I +++++E + Q K + Sbjct: 307 I-----HRIGQTQNVSIKRFIVKDSVEERMQQVQARKQRL 341 >gi|301092959|ref|XP_002997329.1| DNA repair protein, putative [Phytophthora infestans T30-4] gi|262110818|gb|EEY68870.1| DNA repair protein, putative [Phytophthora infestans T30-4] Length = 736 Score = 97.7 bits (242), Expect = 8e-19, Method: Composition-based stats. Identities = 30/163 (18%), Positives = 54/163 (33%), Gaps = 25/163 (15%) Query: 52 HDEKIKALEVIIEKANAA----PIIVAYHFNSDLARLQKAFPQG-------------RTL 94 KI+AL +E A I+ F + L +Q G Sbjct: 563 SSTKIEALMQELELMRARDPSGKAIIFSQFVNMLDIIQHRLQLGGVKCVKLSGNMSMSVR 622 Query: 95 DKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 D+ ++ + + + G LNL +I + WW+ Q I+R Sbjct: 623 DRTIKAFRD--DPTVTAFLISLKAGGVALNLTVASHIFLM-DPWWNPAAENQAIDR---- 675 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + G + + I T++E +L+ K I + + A Sbjct: 676 -THRLGQFKPIQATRFIIAGTVEERILKLQEKKRLIFEGTVGA 717 >gi|195328571|ref|XP_002030988.1| GM24274 [Drosophila sechellia] gi|194119931|gb|EDW41974.1| GM24274 [Drosophila sechellia] Length = 1923 Score = 97.7 bits (242), Expect = 8e-19, Method: Composition-based stats. Identities = 34/188 (18%), Positives = 72/188 (38%), Gaps = 34/188 (18%) Query: 33 LQLANGAVYYDEEKHWKEVHDEKIKALEVII---------EKANAAPIIVAYHFNSDLAR 83 QLA D+ +H K+ AL+ ++ E + ++ + L Sbjct: 1674 SQLALSNSSLDDIEH-----SAKLPALKQLLLDCGIGVQTESVSQHRALIFCQLKAMLDI 1728 Query: 84 LQK-------------AFPQGRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGG 129 +++ + + +N + I +L G GLNL G Sbjct: 1729 VEQDLLRRHLPSVTYLRLDGSVPASQRQDIVNNFNSDPSIDVLLLTTMVGGLGLNLT-GA 1787 Query: 130 NILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKST 189 + ++F W+ + Q ++R + G K+ V VY LI +N+++E ++ + K Sbjct: 1788 DTVIFVEHDWNPMKDLQAMDR-----AHRIGQKKVVNVYRLITRNSLEEKIMGLQKFKIL 1842 Query: 190 IQDLLLNA 197 + +++A Sbjct: 1843 TANTVVSA 1850 >gi|83776027|dbj|BAE66146.1| unnamed protein product [Aspergillus oryzae] Length = 966 Score = 97.7 bits (242), Expect = 8e-19, Method: Composition-based stats. Identities = 27/165 (16%), Positives = 63/165 (38%), Gaps = 25/165 (15%) Query: 51 VHDEKIK-ALE---VIIEKAN----AAPIIVAYHFNSDLARL-----------QKAFPQG 91 + KI ALE I+ + +++ F S L + ++ Sbjct: 786 ISSSKIDRALEIVRDIVARGEPGGEREKVVIFSQFTSMLDLIEVPLARHGWAFRRYDGTM 845 Query: 92 RTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERI 151 + D+ T+ + +L + GLNL +++ +W+ Q + R+ Sbjct: 846 KPADRHAATVHFATDPDCLILLVSMKAGNSGLNLTAASQVIIL-DPFWNPYVEDQAVGRV 904 Query: 152 GVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + G +R V V+ ++ NT+++ +L K + + +++ Sbjct: 905 -----HRIGQRRPVHVHRILVSNTVEDRILDFQDRKRQLIEGIVD 944 >gi|67594179|ref|XP_665781.1| RAD26-like dna repair and recombination protein [Cryptosporidium hominis TU502] gi|54656607|gb|EAL35548.1| RAD26-like dna repair and recombination protein [Cryptosporidium hominis] Length = 822 Score = 97.7 bits (242), Expect = 8e-19, Method: Composition-based stats. Identities = 37/174 (21%), Positives = 63/174 (36%), Gaps = 25/174 (14%) Query: 47 HWKEVHDEKIKALEVIIE---KANAAPIIVAYHFNSDLARLQKAFPQ------------- 90 + K +AL I++ +++ L L + Sbjct: 352 NVNGRDSGKYQALMSILKLWRDKKEHRVLIFTQGVRTLKLLSALLEKDLGLIPNKDVLTL 411 Query: 91 --GRTLDKDPCTIQEWNEGK-IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQM 147 L ++ +N+ + I L G GLN+ G N ++ + WW+ Q Sbjct: 412 DGSTPLSTRFSLVKRFNQNQSIFLFILTSRVGGVGLNIT-GANRVILYDPWWNPMTDVQA 470 Query: 148 IERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 ER + G K+ V VY LI ++TI+E + QR K I +L K + Sbjct: 471 KERCW-----RIGQKKEVIVYRLITRDTIEEKIFQRQLFKEFIAKQILKDPKSQ 519 >gi|154296983|ref|XP_001548920.1| hypothetical protein BC1G_12580 [Botryotinia fuckeliana B05.10] gi|150843107|gb|EDN18300.1| hypothetical protein BC1G_12580 [Botryotinia fuckeliana B05.10] Length = 817 Score = 97.7 bits (242), Expect = 8e-19, Method: Composition-based stats. Identities = 26/140 (18%), Positives = 53/140 (37%), Gaps = 18/140 (12%) Query: 68 AAPIIVAYHFNSDLARLQK-----------AFPQGRTLDKDPCTIQEWNE-GKIPLLFAH 115 +++ F + L L+ D I+E+NE + L Sbjct: 595 GHKVLIFSQFKTQLDILEDYARELRNWKVCRIDGSVAQDFRRQQIKEFNEDPEFKLFLLS 654 Query: 116 PASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNT 175 + G G+NL + ++ F W+ ++ Q R + G + V V+ L + T Sbjct: 655 TRAGGQGINL-ASADTVILFDSDWNPQQDLQA-----QDRAHRIGQTKPVVVFRLATKGT 708 Query: 176 IDELVLQRLRTKSTIQDLLL 195 ++E +L K ++ L++ Sbjct: 709 VEEDLLMSADAKRRLEKLVI 728 >gi|85724914|ref|NP_001033890.1| CG5899, isoform C [Drosophila melanogaster] gi|84795289|gb|ABC65886.1| CG5899, isoform C [Drosophila melanogaster] Length = 831 Score = 97.7 bits (242), Expect = 8e-19, Method: Composition-based stats. Identities = 28/149 (18%), Positives = 59/149 (39%), Gaps = 17/149 (11%) Query: 65 KANAAPIIVAYHFNSDLA------RLQK----AFPQGRTLDKDPCTIQEWNEGK-IPLLF 113 KA +++ F L R++K ++ I ++N I + Sbjct: 652 KAEGHRVLLFSQFTMMLDIVEEYLRIRKFGFCRLDGATAVNVRQDLITDFNGDDSIFVFL 711 Query: 114 AHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQ 173 + G G+NL ++ + ++ +Q +R + G +R V +Y LI++ Sbjct: 712 LSTKAGGVGINLTAADTCVIH-DIDFNPYNDKQAEDRC-----HRMGQQRPVTIYRLISE 765 Query: 174 NTIDELVLQRLRTKSTIQDLLLNALKKET 202 +TI+E +L K ++ + + K E Sbjct: 766 STIEEGILMAAEEKLKLEKDITSNEKGEV 794 >gi|281361889|ref|NP_732097.2| helicase 89B [Drosophila melanogaster] gi|272477008|gb|AAF55260.3| helicase 89B [Drosophila melanogaster] Length = 1923 Score = 97.7 bits (242), Expect = 8e-19, Method: Composition-based stats. Identities = 34/188 (18%), Positives = 72/188 (38%), Gaps = 34/188 (18%) Query: 33 LQLANGAVYYDEEKHWKEVHDEKIKALEVII---------EKANAAPIIVAYHFNSDLAR 83 QLA D+ +H K+ AL+ ++ E + ++ + L Sbjct: 1674 SQLALSNSSLDDIEH-----SAKLPALKQLLLDCGIGVQTESVSQHRALIFCQLKAMLDI 1728 Query: 84 LQK-------------AFPQGRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGG 129 +++ + + +N + I +L G GLNL G Sbjct: 1729 VEQDLLRRHLPSVTYLRLDGSVPASQRQDIVNNFNSDPSIDVLLLTTMVGGLGLNLT-GA 1787 Query: 130 NILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKST 189 + ++F W+ + Q ++R + G K+ V VY LI +N+++E ++ + K Sbjct: 1788 DTVIFVEHDWNPMKDLQAMDR-----AHRIGQKKVVNVYRLITRNSLEEKIMGLQKFKIL 1842 Query: 190 IQDLLLNA 197 + +++A Sbjct: 1843 TANTVVSA 1850 >gi|331244822|ref|XP_003335050.1| ISWI chromatin-remodeling complex ATPase ISW2 [Puccinia graminis f. sp. tritici CRL 75-36-700-3] gi|309314040|gb|EFP90631.1| ISWI chromatin-remodeling complex ATPase ISW2 [Puccinia graminis f. sp. tritici CRL 75-36-700-3] Length = 958 Score = 97.7 bits (242), Expect = 8e-19, Method: Composition-based stats. Identities = 28/143 (19%), Positives = 59/143 (41%), Gaps = 21/143 (14%) Query: 68 AAPIIVAYHFNSDLARLQK-----------AFPQGRTLDKDPCTIQEWNEGKIP----LL 112 ++V F S L +Q + ++E+NEG+ P L Sbjct: 716 GHKVLVFSQFTSMLDIIQDWATELKGWRVSRIDGVTRQESRREQMKEFNEGEGPDACRLF 775 Query: 113 FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIA 172 + G G+NL + ++ F W+ ++ Q +R+ + G + V V+ ++ Sbjct: 776 LLSTRAGGVGINL-VAADTVILFDSDWNPQQDLQAQDRV-----HRIGQTKPVLVFRFVS 829 Query: 173 QNTIDELVLQRLRTKSTIQDLLL 195 NTI+ +L++ K ++ L++ Sbjct: 830 GNTIESKMLEKAGQKRKLETLVI 852 >gi|224052611|ref|XP_002191629.1| PREDICTED: BTAF1 RNA polymerase II, B-TFIID transcription factor-associated, 170kDa (Mot1 homolog, S. cerevisiae) [Taeniopygia guttata] Length = 1844 Score = 97.7 bits (242), Expect = 8e-19, Method: Composition-based stats. Identities = 32/145 (22%), Positives = 57/145 (39%), Gaps = 26/145 (17%) Query: 69 APIIVAYHFNSDLA-----------------RLQKAFPQGRTLDKDPCTIQEWNEGKIPL 111 +++ S L RL + P G+ + + N+ I + Sbjct: 1639 HRVLIFCQLKSMLDIVEHDLLRPQLPSVTYLRLDGSIPAGQ---RHSIVSRFNNDPSIDV 1695 Query: 112 LFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLI 171 L G GLNL G + +VF W+ Q ++R + G KR V VY LI Sbjct: 1696 LLLTTHVGGLGLNLT-GADTVVFVEHDWNPMRDLQAMDR-----AHRIGQKRVVNVYRLI 1749 Query: 172 AQNTIDELVLQRLRTKSTIQDLLLN 196 + T++E ++ + K I + +++ Sbjct: 1750 TRGTLEEKIMGLQKFKMNIANTVIS 1774 >gi|194901180|ref|XP_001980130.1| GG16968 [Drosophila erecta] gi|190651833|gb|EDV49088.1| GG16968 [Drosophila erecta] Length = 1925 Score = 97.7 bits (242), Expect = 8e-19, Method: Composition-based stats. Identities = 34/188 (18%), Positives = 72/188 (38%), Gaps = 34/188 (18%) Query: 33 LQLANGAVYYDEEKHWKEVHDEKIKALEVII---------EKANAAPIIVAYHFNSDLAR 83 QLA D+ +H K+ AL+ ++ E + ++ + L Sbjct: 1676 SQLALSNSSLDDIEH-----SAKLPALKQLLLDCGIGVQTESVSQHRALIFCQLKAMLDI 1730 Query: 84 LQK-------------AFPQGRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGG 129 +++ + + +N + I +L G GLNL G Sbjct: 1731 VEQDLLRRHLPSVTYLRLDGSVPASQRQDIVNNFNSDPSIDVLLLTTMVGGLGLNLT-GA 1789 Query: 130 NILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKST 189 + ++F W+ + Q ++R + G K+ V VY LI +N+++E ++ + K Sbjct: 1790 DTVIFVEHDWNPMKDLQAMDR-----AHRIGQKKVVNVYRLITRNSLEEKIMGLQKFKIL 1844 Query: 190 IQDLLLNA 197 + +++A Sbjct: 1845 TANTVVSA 1852 >gi|195384048|ref|XP_002050736.1| GJ20044 [Drosophila virilis] gi|194145533|gb|EDW61929.1| GJ20044 [Drosophila virilis] Length = 3256 Score = 97.7 bits (242), Expect = 8e-19, Method: Composition-based stats. Identities = 33/198 (16%), Positives = 74/198 (37%), Gaps = 22/198 (11%) Query: 16 QGENIEAFNSASKTVKCLQL---ANGAVYYDEEKHWKEVHDEKIKALEVIIEKA--NAAP 70 + IE + + + K L + + + K++ L+ ++ + + Sbjct: 1621 KERQIETTVAQTLSPKLTLLHPIISAMTTQFPDPRLIQYDCGKLQTLDRLLRQLKVDGHR 1680 Query: 71 IIVAYHFNSDLARLQ---------KAFPQGRTLDKDPCTI-QEWNEGK-IPLLFAHPASC 119 +++ L L+ G T + + + +N K I S Sbjct: 1681 VLIFTQMTKMLDVLEAFLNYHGHIYLRLDGSTRVEQRQILMERFNGDKRIFCFILSTRSG 1740 Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 G G+NL G + ++F+ W+ Q +R + G R V +Y L+++ TI+ Sbjct: 1741 GVGINLT-GADTVIFYDSDWNPTMDAQAQDRC-----HRIGQTRDVHIYRLVSEKTIEVN 1794 Query: 180 VLQRLRTKSTIQDLLLNA 197 +L++ K + D+ + Sbjct: 1795 ILKKANQKRMLSDIAIEG 1812 >gi|118092869|ref|XP_421689.2| PREDICTED: similar to TBP-associated factor 172 [Gallus gallus] Length = 1865 Score = 97.7 bits (242), Expect = 8e-19, Method: Composition-based stats. Identities = 33/145 (22%), Positives = 57/145 (39%), Gaps = 26/145 (17%) Query: 69 APIIVAYHFNSDLA-----------------RLQKAFPQGRTLDKDPCTIQEWNEGKIPL 111 I++ S L RL + P G+ + + N+ I + Sbjct: 1660 HRILIFCQLKSMLDIVEHDLLRPQLPSVTYLRLDGSIPAGQ---RHSIVSRFNNDPSIDV 1716 Query: 112 LFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLI 171 L G GLNL G + +VF W+ Q ++R + G KR V VY LI Sbjct: 1717 LLLTTHVGGLGLNLT-GADTVVFVEHDWNPMRDLQAMDR-----AHRIGQKRVVNVYRLI 1770 Query: 172 AQNTIDELVLQRLRTKSTIQDLLLN 196 + T++E ++ + K I + +++ Sbjct: 1771 TRGTLEEKIMGLQKFKMNIANTVIS 1795 >gi|50312039|ref|XP_456051.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140] gi|74689973|sp|Q6CJ38|SWR1_KLULA RecName: Full=Helicase SWR1 gi|49645187|emb|CAG98759.1| KLLA0F21758p [Kluyveromyces lactis] Length = 1572 Score = 97.7 bits (242), Expect = 8e-19, Method: Composition-based stats. Identities = 30/166 (18%), Positives = 70/166 (42%), Gaps = 19/166 (11%) Query: 44 EEKHWKEVHDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAF---------PQGR 92 +K + K++ L +++ K N ++ L L++ G Sbjct: 1300 PDKSLLQYDCGKLQKLAQLLQNLKDNGHRALIFTQMTKVLDILEQFLNFHGYLYMRLDGA 1359 Query: 93 TLDKDPCTI-QEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 T +D + + +N + +I + S G G+NL G + ++F+ W+ +Q +R Sbjct: 1360 TKIEDRQILTERFNSDPRITVFILSSRSGGLGINLT-GADTVIFYDSDWNPAMDKQCQDR 1418 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + G R V +Y ++ +TI+ +L++ K + ++++ Sbjct: 1419 C-----HRIGQTRDVHIYRFVSDHTIESNILKKANQKRHLDNVVIQ 1459 >gi|209876524|ref|XP_002139704.1| helicase SWR1 protein [Cryptosporidium muris RN66] gi|209555310|gb|EEA05355.1| helicase SWR1 protein, putative [Cryptosporidium muris RN66] Length = 1446 Score = 97.7 bits (242), Expect = 8e-19, Method: Composition-based stats. Identities = 31/164 (18%), Positives = 67/164 (40%), Gaps = 19/164 (11%) Query: 46 KHWKEVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQK----------AFPQGRT 93 + E K + L ++ I+ + L L+ G Sbjct: 1100 RRTIEDDCGKFQILSTLLHNLKKGDHRCIIFTQMSKMLDILEAFINFHGYTYLRLDGGTK 1159 Query: 94 LDKDPCTIQEWNEGK-IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIG 152 +D + +N+ + + L + S G GLNL G + ++F+ W+ +Q ++R Sbjct: 1160 VDARQKLVDRFNKDRRLFLFISSTRSGGVGLNLT-GADTVIFYDSDWNPAMDRQAMDRC- 1217 Query: 153 VTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + G R V +Y L+++ TI+E + ++ K + D++++ Sbjct: 1218 ----HRIGQTRDVHIYRLLSEWTIEENIFRKQLQKRLLDDVVVD 1257 >gi|323454254|gb|EGB10124.1| hypothetical protein AURANDRAFT_1751 [Aureococcus anophagefferens] Length = 421 Score = 97.7 bits (242), Expect = 9e-19, Method: Composition-based stats. Identities = 25/154 (16%), Positives = 60/154 (38%), Gaps = 20/154 (12%) Query: 51 VHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQK----------AFPQGRTLDKDP 98 + + K + L ++ K +++ + L L + + Sbjct: 274 LDNAKCERLRELLPKLKKEGHKVLLFSQWVRLLDLLGLLCDDLDLNWSRLDGSTPITERQ 333 Query: 99 CTIQEWNE--GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 + ++N+ G + + + G G+NL G + ++ + ++ E I+R R Sbjct: 334 QLVADFNDPAGDLDVFLLSTRAGGLGINLT-GADTVIIHDVDFNPE-----IDRQAEDRA 387 Query: 157 RQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 + G + V VY L+A++T+D ++ K + Sbjct: 388 HRIGQTKPVTVYRLVAEDTVDRDIIDLANRKRAV 421 >gi|315053759|ref|XP_003176254.1| ATP-dependent helicase RIS1 [Arthroderma gypseum CBS 118893] gi|311338100|gb|EFQ97302.1| ATP-dependent helicase RIS1 [Arthroderma gypseum CBS 118893] Length = 1178 Score = 97.7 bits (242), Expect = 9e-19, Method: Composition-based stats. Identities = 27/166 (16%), Positives = 63/166 (37%), Gaps = 22/166 (13%) Query: 45 EKHWKEVHDEKIKALEVIIEK---ANAAPIIVAYHFNSDLARLQ----------KAFPQG 91 +K W+ K+ I++ + I+ F S L ++ + + Sbjct: 999 DKRWE--TSAKVDKTIEILQSLRDSGDEKTIIFSQFTSLLDLIEVPINRRGWNYRRYDGS 1056 Query: 92 -RTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 + D++ + + ++ + GLNL + ++ +W+ Q I+R Sbjct: 1057 MKPGDRNASVLDFTDNSDCRIMLVSLKAGNSGLNL-VAASQVIILDPFWNPYIEDQAIDR 1115 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + G R V V+ L+ +NT+++ ++ K I + L+ Sbjct: 1116 -----AHRIGQLRPVMVHRLLVENTVEDRIVALQDKKRQIIEGALD 1156 >gi|255577952|ref|XP_002529848.1| DNA repair and recombination protein RAD26, putative [Ricinus communis] gi|223530676|gb|EEF32549.1| DNA repair and recombination protein RAD26, putative [Ricinus communis] Length = 1230 Score = 97.7 bits (242), Expect = 9e-19, Method: Composition-based stats. Identities = 31/142 (21%), Positives = 51/142 (35%), Gaps = 17/142 (11%) Query: 65 KANAAPIIVAYHFNSDLARLQ----------KAFPQGRTLDKDPCTIQEWNE-GKIPLLF 113 + +++ L L+ + + + I E+N + + Sbjct: 756 REQGHRVLLFAQTQQMLDILEIFLNSGGYSYRRMDGLTPIKQRMALIDEFNNSNDVFIFI 815 Query: 114 AHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQ 173 G G NL G N ++ F W+ Q ER + G KR V VY LI + Sbjct: 816 LTTKVGGLGTNLT-GANRVIIFDPDWNPSTDMQARERAW-----RIGQKRDVTVYRLITR 869 Query: 174 NTIDELVLQRLRTKSTIQDLLL 195 TI+E V R K + + +L Sbjct: 870 GTIEEKVYHRQIYKHFLTNKIL 891 >gi|145491053|ref|XP_001431526.1| hypothetical protein [Paramecium tetraurelia strain d4-2] gi|124398631|emb|CAK64128.1| unnamed protein product [Paramecium tetraurelia] Length = 1668 Score = 97.7 bits (242), Expect = 9e-19, Method: Composition-based stats. Identities = 32/205 (15%), Positives = 70/205 (34%), Gaps = 37/205 (18%) Query: 22 AFNSASKTV---KCLQLANG-AVYYDEEKHWKEVHDEKIKALEVIIEKA----------- 66 A N+AS + + N + + + + K + ++E + Sbjct: 825 AANAASLNNLEIQLRKCCNHPFLIQEMQNDLTKGCSNKNDYILKLVECSGKMILLDKLLN 884 Query: 67 ----NAAPIIVAYHFNSDLARLQKAFP---------QGRTLDKDPC-TIQEWNEG--KIP 110 +++ F L+ L++ G+ ++ I +N+ K Sbjct: 885 KFRNEGKKMLIFSQFTMMLSILEEYLKFRQVKYEKIDGQIKARERQNAIDRFNDPQKKRE 944 Query: 111 LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYL 170 + + G G+NL I+V + W+ + Q R + G + V VY L Sbjct: 945 VFLLSTKAGGQGINLT-AAEIVVIYDSDWNPQNDVQATAR-----AHRIGQSKEVTVYRL 998 Query: 171 IAQNTIDELVLQRLRTKSTIQDLLL 195 I ++T + + +R K + + Sbjct: 999 ITKDTYEAEMFERAIKKLGLDQAIF 1023 >gi|145475071|ref|XP_001423558.1| hypothetical protein [Paramecium tetraurelia strain d4-2] gi|124390619|emb|CAK56160.1| unnamed protein product [Paramecium tetraurelia] Length = 1127 Score = 97.7 bits (242), Expect = 9e-19, Method: Composition-based stats. Identities = 25/138 (18%), Positives = 53/138 (38%), Gaps = 17/138 (12%) Query: 71 IIVAYHFNSDLARLQKAFP-----------QGRTLDKDPCTIQEWNEGKIPLLFAHPASC 119 +++ L L++ Q + D+ + KI + Sbjct: 911 VLIFCQMTRMLDILEEYMLHKGYTYFRMDGQCQINDRRDMVNEFQQNDKIFAFLLSTRAG 970 Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 G G+ L + ++F+ W+ Q +R + G + V+VY LI + TI+E Sbjct: 971 GLGITLTQ-ADAVIFYDNDWNPTMDAQATDR-----AHRIGRTKDVYVYRLITKGTIEER 1024 Query: 180 VLQRLRTKSTIQDLLLNA 197 +++R + K +Q + + Sbjct: 1025 IVKRAQQKQNVQSTVYSG 1042 >gi|322817843|gb|EFZ25436.1| helicase-like protein, putative [Trypanosoma cruzi] Length = 929 Score = 97.7 bits (242), Expect = 9e-19, Method: Composition-based stats. Identities = 37/201 (18%), Positives = 74/201 (36%), Gaps = 25/201 (12%) Query: 11 LYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEK--ANA 68 L + G + A A + A+ + DE K+ L+ ++ + AN Sbjct: 483 LALRILGVEVRASAQAGWEERL---ASAGIELDEASIIA--PSAKMIELDRMLREFKANG 537 Query: 69 APIIVAYHFNSDLARLQ----------KAFPQGRTLDKDPCTIQEWNEG--KIPLLFAHP 116 ++ +F S L LQ + + + ++ +N + Sbjct: 538 HRCLIFSNFTSILDLLQALCVLRGYGFERIDGSTSRVERELSMIRFNAPGSACFVFLLTT 597 Query: 117 ASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTI 176 + G G+ L G + ++ F + I+R R + G R V VY L +NTI Sbjct: 598 TAGGVGVTLT-GADTVILFD-----AHYNPQIDRQAADRAHRIGQTRVVRVYRLCLKNTI 651 Query: 177 DELVLQRLRTKSTIQDLLLNA 197 +E + K+++ D +++ Sbjct: 652 EERIHNVALRKASLGDFIVDG 672 >gi|326923770|ref|XP_003208107.1| PREDICTED: TATA-binding protein-associated factor 172-like [Meleagris gallopavo] Length = 2308 Score = 97.7 bits (242), Expect = 9e-19, Method: Composition-based stats. Identities = 34/145 (23%), Positives = 57/145 (39%), Gaps = 26/145 (17%) Query: 69 APIIVAYHFNSDLA-----------------RLQKAFPQGRTLDKDPCTIQEWNEGKIPL 111 I++ S L RL + P G+ + Q N+ I + Sbjct: 2103 HRILIFCQLKSMLDIVEHDLLRPQLPSVTYLRLDGSIPAGQ---RHSIVSQFNNDPSIDV 2159 Query: 112 LFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLI 171 L G GLNL G + +VF W+ Q ++R + G KR V VY LI Sbjct: 2160 LLLTTHVGGLGLNLT-GADTVVFVEHDWNPMRDLQAMDR-----AHRIGQKRVVNVYRLI 2213 Query: 172 AQNTIDELVLQRLRTKSTIQDLLLN 196 + T++E ++ + K I + +++ Sbjct: 2214 TRGTLEEKIMGLQKFKMNIANTVIS 2238 >gi|323449740|gb|EGB05626.1| hypothetical protein AURANDRAFT_959 [Aureococcus anophagefferens] Length = 472 Score = 97.7 bits (242), Expect = 9e-19, Method: Composition-based stats. Identities = 42/208 (20%), Positives = 78/208 (37%), Gaps = 32/208 (15%) Query: 13 CDLQGENIEAFNSASKTVKCLQLANGAVYY---------DEEKHWKE---VHDEKIKALE 60 L A S +QL + D + E K++ L+ Sbjct: 271 LKLDDRGPAAGGYKSLVNLLMQLRKTCCHPFLFADAEGCDPGETTLEELVAASGKLRVLD 330 Query: 61 VIIEKANAAP--IIVAYHFNSDLARL-----QKAFPQGRTLDKDPCT-----IQEWNEGK 108 ++ K +A ++V F S + L + +P R ++ +NE Sbjct: 331 RLLVKLHARKHRVVVFSQFASMVDVLDDYCALRGWPFCRLTGSTNRVQRVVNVRAFNEPS 390 Query: 109 IPLLF--AHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVF 166 PL + G G+NLQ + +V + W+ + Q + R+ + G + V Sbjct: 391 SPLFLFLMTTRAGGLGINLQ-SADTVVLYDSDWNPQADLQAMARV-----HRLGQTKTVH 444 Query: 167 VYYLIAQNTIDELVLQRLRTKSTIQDLL 194 +Y L +Q T +E VLQR + K + +++ Sbjct: 445 IYRLCSQGTAEERVLQRSQKKLFLSNMV 472 >gi|321261786|ref|XP_003195612.1| chromodomain helicase [Cryptococcus gattii WM276] gi|317462086|gb|ADV23825.1| Chromodomain helicase, putative [Cryptococcus gattii WM276] Length = 1502 Score = 97.7 bits (242), Expect = 9e-19, Method: Composition-based stats. Identities = 26/170 (15%), Positives = 69/170 (40%), Gaps = 20/170 (11%) Query: 50 EVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQ----------KAFPQGRTLDKD 97 ++ K+ L++++ + ++ +++ L + + D Sbjct: 740 VMNSGKMVCLDMLLSRLKSDGHRVLIFSQMVRLLDIISDYMTARGYVHQRLDGTVPSDVR 799 Query: 98 PCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTR 155 +I+ +N P + G G+NL + ++ F ++ + Q + R Sbjct: 800 KKSIEHFNAPGSPDFAFLLSTRAGGLGINL-ETADTVIIFDSDYNPQNDLQAMAR----- 853 Query: 156 QRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIHV 205 + G +R V ++ L+++ TI+E +L+R K ++ ++N + H+ Sbjct: 854 AHRIGQQRHVSIFRLVSKGTIEEDILERAMRKMLLEYAIINKMDTTGAHI 903 >gi|195025748|ref|XP_001986118.1| GH20710 [Drosophila grimshawi] gi|193902118|gb|EDW00985.1| GH20710 [Drosophila grimshawi] Length = 3285 Score = 97.7 bits (242), Expect = 9e-19, Method: Composition-based stats. Identities = 31/193 (16%), Positives = 71/193 (36%), Gaps = 19/193 (9%) Query: 18 ENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKA--NAAPIIVAY 75 E A + K + + + + K++ ++ ++ + + +++ Sbjct: 1673 EETIAQTVSPKLTLLHPIISAMTTQFPDPRLIQYDCGKLQTMDRLLRQLKVDGHRVLIFT 1732 Query: 76 HFNSDLARLQ---------KAFPQGRTLDKDPCTI-QEWNEGK-IPLLFAHPASCGHGLN 124 L L+ G T + + + +N K I S G G+N Sbjct: 1733 QMTKMLDVLEAFLNYHGHIYLRLDGSTRVEQRQILMERFNGDKRIFCFILSTRSGGVGIN 1792 Query: 125 LQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRL 184 L G + ++F+ W+ Q +R + G R V +Y L+++ TI+ +L++ Sbjct: 1793 LT-GADTVIFYDSDWNPTMDAQAQDRC-----HRIGQTRDVHIYRLVSEKTIEVNILKKA 1846 Query: 185 RTKSTIQDLLLNA 197 K + D+ + Sbjct: 1847 NQKRMLSDMAIEG 1859 >gi|238882230|gb|EEQ45868.1| TATA-binding protein associated factor MOT1 [Candida albicans WO-1] Length = 1917 Score = 97.7 bits (242), Expect = 9e-19, Method: Composition-based stats. Identities = 34/143 (23%), Positives = 60/143 (41%), Gaps = 20/143 (13%) Query: 68 AAPIIVAYHFNSDL-----ARLQKAFP-------QGRTLDKDPCTI-QEWNE-GKIPLLF 113 ++ L L+K P G T +D +I +++NE I +L Sbjct: 1686 EHRALIFCQLKDMLDIVENELLRKYLPSVTFMRLDGSTDPRDRQSIVRKFNEDPSIDVLL 1745 Query: 114 AHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQ 173 G GLNL G + ++F W+ Q ++R + G K+ V VY LI + Sbjct: 1746 LTTKVGGLGLNLT-GADTVIFVEHDWNPMNDLQAMDR-----AHRLGQKKVVNVYRLITK 1799 Query: 174 NTIDELVLQRLRTKSTIQDLLLN 196 +T++E ++ + K I ++N Sbjct: 1800 DTLEEKIMGLQKFKMNIASTIVN 1822 >gi|222622979|gb|EEE57111.1| hypothetical protein OsJ_06974 [Oryza sativa Japonica Group] Length = 1028 Score = 97.7 bits (242), Expect = 9e-19, Method: Composition-based stats. Identities = 41/160 (25%), Positives = 65/160 (40%), Gaps = 21/160 (13%) Query: 42 YDEEKHWKEVHDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQ-----KAFPQGRT- 93 D EK+W E KI L +E + + A I+ + + L LQ F R Sbjct: 852 IDVEKNWVE--SSKISFLLQELEVLRTSGAKSIIFSQWTAFLDLLQIPLSRHNFSFARLD 909 Query: 94 ----LDKDPCTIQEWNEGK-IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMI 148 L + I+E++E K I +L + G G+NL N V WW+ +Q I Sbjct: 910 GTLNLQQREKVIKEFSEDKSILVLLMSLKAGGVGINLTAASNAFVM-DPWWNPAVEEQAI 968 Query: 149 ERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKS 188 RI + G ++V + I + T++E + K Sbjct: 969 MRI-----HRIGQTKSVSIKRFIVKGTVEERMEAVQARKQ 1003 >gi|218190874|gb|EEC73301.1| hypothetical protein OsI_07472 [Oryza sativa Indica Group] Length = 1031 Score = 97.7 bits (242), Expect = 9e-19, Method: Composition-based stats. Identities = 41/160 (25%), Positives = 65/160 (40%), Gaps = 21/160 (13%) Query: 42 YDEEKHWKEVHDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQ-----KAFPQGRT- 93 D EK+W E KI L +E + + A I+ + + L LQ F R Sbjct: 855 IDVEKNWVE--SSKISFLLQELEVLRTSGAKSIIFSQWTAFLDLLQIPLSRHNFSFARLD 912 Query: 94 ----LDKDPCTIQEWNEGK-IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMI 148 L + I+E++E K I +L + G G+NL N V WW+ +Q I Sbjct: 913 GTLNLQQREKVIKEFSEDKSILVLLMSLKAGGVGINLTAASNAFVM-DPWWNPAVEEQAI 971 Query: 149 ERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKS 188 RI + G ++V + I + T++E + K Sbjct: 972 MRI-----HRIGQTKSVSIKRFIVKGTVEERMEAVQARKQ 1006 >gi|18403061|ref|NP_564568.1| SNF2 domain-containing protein / helicase domain-containing protein / RING finger domain-containing protein [Arabidopsis thaliana] gi|14532630|gb|AAK64043.1| putative DNA-binding protein [Arabidopsis thaliana] gi|23296945|gb|AAN13207.1| putative DNA-binding protein [Arabidopsis thaliana] gi|332194424|gb|AEE32545.1| SNF2 and helicase domain-containing protein [Arabidopsis thaliana] Length = 981 Score = 97.7 bits (242), Expect = 9e-19, Method: Composition-based stats. Identities = 26/170 (15%), Positives = 64/170 (37%), Gaps = 19/170 (11%) Query: 34 QLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPI--IVAYHFNSDLARLQKAFPQ- 90 Q+A+ + +++ + ++ + +N PI I+ + L ++ + + Sbjct: 790 QMASSSQQPNDDDDDDDDDVTIVEKTSLKSTPSNGGPIKTIIFSQWTGMLDLVELSLIEN 849 Query: 91 ----------GRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWD 140 + +D + N+ + ++ + GLN+ ++ LWW+ Sbjct: 850 SIEFRRLDGTMSLIARDRAVKEFSNDPDVKVMIMSLKAGNLGLNM-IAACHVILLDLWWN 908 Query: 141 LEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 Q I+R + G R V V + +NT+++ +L K + Sbjct: 909 PTTEDQAIDR-----AHRIGQTRPVTVTRITIKNTVEDRILALQEEKRKM 953 >gi|164660806|ref|XP_001731526.1| hypothetical protein MGL_1709 [Malassezia globosa CBS 7966] gi|159105426|gb|EDP44312.1| hypothetical protein MGL_1709 [Malassezia globosa CBS 7966] Length = 872 Score = 97.7 bits (242), Expect = 9e-19, Method: Composition-based stats. Identities = 35/156 (22%), Positives = 63/156 (40%), Gaps = 19/156 (12%) Query: 52 HDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFP---------QGRTLDKDPCT 100 + KI+ L II++ +++ F S L L G+T D Sbjct: 687 NSGKIQQLRKIIDEVVERRDRMLIFSQFTSVLDILCVCLEHMGVKYVGFTGQTNVGDRQV 746 Query: 101 -IQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQ 158 + ++ + IP+ + G G+NL N +V F ++ + +Q +R + Sbjct: 747 LVDKFTSDPTIPVFLLSTRAGGLGINL-VAANWVVLFDQDFNPQNDKQATDRC-----YR 800 Query: 159 AGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 G + V V LI++ TIDE +L K + D + Sbjct: 801 IGQTKPVTVVRLISRGTIDEDILALAHRKLELADRV 836 >gi|50294037|ref|XP_449430.1| hypothetical protein [Candida glabrata CBS 138] gi|49528744|emb|CAG62406.1| unnamed protein product [Candida glabrata] Length = 920 Score = 97.7 bits (242), Expect = 9e-19, Method: Composition-based stats. Identities = 35/145 (24%), Positives = 54/145 (37%), Gaps = 17/145 (11%) Query: 69 APIIVAYHFNSDLARLQKAF---------PQGRT--LDKDPCTIQEWNEGKIPLLFAHPA 117 +++ ++ L +Q G T +D N I Sbjct: 650 EKVVIVSNYTQSLDIIQGLMNSNQLSNCRLDGATPAKQRDMLVNTFNNNPNIFGFLLSAK 709 Query: 118 SCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 + G GLNL G + LV F W+ Q + RI + G KR ++Y LI ID Sbjct: 710 AGGVGLNL-IGASRLVLFDNDWNPAVDLQAMSRI-----HREGQKRPCYIYRLITTGCID 763 Query: 178 ELVLQRLRTKSTIQDLLLNALKKET 202 E +LQR K + L++ +T Sbjct: 764 EKILQRQLMKHNLTRKFLSSNTSDT 788 >gi|58260538|ref|XP_567679.1| hypothetical protein CNK02030 [Cryptococcus neoformans var. neoformans JEC21] gi|57229760|gb|AAW46162.1| hypothetical protein CNK02030 [Cryptococcus neoformans var. neoformans JEC21] Length = 1558 Score = 97.7 bits (242), Expect = 9e-19, Method: Composition-based stats. Identities = 46/231 (19%), Positives = 80/231 (34%), Gaps = 33/231 (14%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQL--ANGAVYY----DEEKHWKEVHDE- 54 K Y Q+ + + +QL Y DE+ DE Sbjct: 947 KLYESVQKYKTLPTDMSVAKPQKRQNLQNALMQLRKICNHPYVFREVDEDFTVGNTTDEQ 1006 Query: 55 ------KIKALEVIIEKA--NAAPIIVAYHFN---------SDLARLQKAFPQGRTLDKD 97 K + L+ I+ K +++ + D + G T +D Sbjct: 1007 IIRVAGKFELLDRILPKLFKTGHKVLIFFQMTEIMTIVSDFFDFRGWKYCRLDGSTKAED 1066 Query: 98 PCTI-QEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 T+ +N+ P + + G GLNLQ + ++ + W+ Q Sbjct: 1067 RQTLLSTFNDPNSPYQVFILSTRAGGLGLNLQ-SADTVIIYDTDWNPHADLQA-----QD 1120 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIHV 205 R + G K+ V V LI+ T++ELVL R + K I ++ A K + + Sbjct: 1121 RAHRIGQKKEVRVLRLISSGTVEELVLARAQRKLEIDGKVIQAGKFDEVTT 1171 >gi|123416804|ref|XP_001304972.1| SNF2 family N-terminal domain containing protein [Trichomonas vaginalis G3] gi|121886460|gb|EAX92042.1| SNF2 family N-terminal domain containing protein [Trichomonas vaginalis G3] Length = 1107 Score = 97.7 bits (242), Expect = 9e-19, Method: Composition-based stats. Identities = 34/159 (21%), Positives = 65/159 (40%), Gaps = 20/159 (12%) Query: 52 HDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAF---------PQGRTL-DKDPC 99 K + L+ I+ K A I++ L LQ G T D+ Sbjct: 695 TSGKCEVLDRILPKLKATGHRILIFSQMTEVLTLLQDLLTWRDYKYLRLDGNTKSDQRQQ 754 Query: 100 TIQEWN--EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 I ++N + + + + G GLNLQ + ++ + W+ QQ R+ Sbjct: 755 LIADFNKEDSEYFIFLLSTRAGGLGLNLQT-ADTVILYDNDWNPFADQQARSRV-----H 808 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + G ++ V V L+ +I+E V++R K T+++ ++ Sbjct: 809 RIGQEKPVLVISLVTAGSIEERVVERADDKKTVENKIIE 847 >gi|315041194|ref|XP_003169974.1| DNA repair and recombination protein RAD26 [Arthroderma gypseum CBS 118893] gi|311345936|gb|EFR05139.1| DNA repair and recombination protein RAD26 [Arthroderma gypseum CBS 118893] Length = 1226 Score = 97.7 bits (242), Expect = 9e-19, Method: Composition-based stats. Identities = 29/163 (17%), Positives = 59/163 (36%), Gaps = 20/163 (12%) Query: 53 DEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQK-----------AFPQGRTLDKDPC 99 K++ ++ ++E K ++ L L++ + Sbjct: 738 SGKMQVVKSLLELWKETGHKTLLFAQHRIMLDILERFIRGFDGFNYRRMDGNTPIKARQS 797 Query: 100 TIQEWNE-GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQ 158 + E+N + + G G+NL G + ++ + W+ Q ER + Sbjct: 798 MVDEFNNDPDLHVFLLTTKVGGLGVNLT-GADRVIIYDPDWNPSTDMQARERAW-----R 851 Query: 159 AGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 G KR V +Y L+ TI+E + R K + + +L K+ Sbjct: 852 LGQKREVTIYRLMTAGTIEEKIYHRQIFKQFLTNKILRDPKQR 894 >gi|225682364|gb|EEH20648.1| DNA repair and recombination protein RAD26 [Paracoccidioides brasiliensis Pb03] Length = 1236 Score = 97.7 bits (242), Expect = 9e-19, Method: Composition-based stats. Identities = 30/163 (18%), Positives = 60/163 (36%), Gaps = 20/163 (12%) Query: 53 DEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQ-----------KAFPQGRTLDKDPC 99 K++ ++ ++E K ++ L L+ + + Sbjct: 765 SGKMQVVKALLELWKETGHKSLLFAQHRIMLDILERFIKSMTGFKYQRMDGNTPIKLRQS 824 Query: 100 TIQEWNE-GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQ 158 + E+N +I + G G+NL G + ++ + W+ Q ER + Sbjct: 825 LVDEFNNNPEIHIFLLTTKVGGLGVNLT-GADRVIIYDPDWNPSTDVQARERAW-----R 878 Query: 159 AGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 G KR V +Y L+ TI+E + R K + + +L K+ Sbjct: 879 LGQKREVTIYRLMTAGTIEEKIYHRQIFKQFLTNKILRDPKQR 921 >gi|126273285|ref|XP_001375597.1| PREDICTED: similar to high-mobility group protein 2-like 1, [Monodelphis domestica] Length = 1878 Score = 97.7 bits (242), Expect = 9e-19, Method: Composition-based stats. Identities = 33/145 (22%), Positives = 57/145 (39%), Gaps = 26/145 (17%) Query: 69 APIIVAYHFNSDLA-----------------RLQKAFPQGRTLDKDPCTIQEWNEGKIPL 111 I++ S L RL + P G+ + + N+ I + Sbjct: 1673 HRILIFCQLKSMLDIVEHDLLKPHLPSVTYLRLDGSIPAGQ---RHSIVSRFNNDPSIDV 1729 Query: 112 LFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLI 171 L G GLNL G + +VF W+ Q ++R + G KR V VY LI Sbjct: 1730 LLLTTHVGGLGLNLT-GADTVVFVEHDWNPMRDLQAMDR-----AHRIGQKRVVNVYRLI 1783 Query: 172 AQNTIDELVLQRLRTKSTIQDLLLN 196 + T++E ++ + K I + +++ Sbjct: 1784 TRGTLEEKIMGLQKFKMNIANTVIS 1808 >gi|322697599|gb|EFY89377.1| helicase SWR1 [Metarhizium acridum CQMa 102] Length = 1732 Score = 97.3 bits (241), Expect = 1e-18, Method: Composition-based stats. Identities = 30/166 (18%), Positives = 70/166 (42%), Gaps = 19/166 (11%) Query: 44 EEKHWKEVHDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAF---------PQGR 92 +K + K++ L+ ++ +A + ++ L L++ G Sbjct: 1401 PDKRLLQYDCGKLQVLDKLLRKLQAGSHRALIFTQMTKVLDILEQFLNIHGHKYLRLDGA 1460 Query: 93 TLDKDPCTI--QEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 T + + + N+ +I S G G+NL G + ++F+ W+ +Q +R Sbjct: 1461 TKVEQRQILTDRFNNDPRILCFILSTRSGGLGINLT-GADTVIFYDQDWNPAMDKQCQDR 1519 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + G R V +Y L++++TI+ +L++ K + D+++ Sbjct: 1520 C-----HRIGQTRDVHIYRLVSEHTIEANILRKASQKQMLDDVVIQ 1560 >gi|46125857|ref|XP_387482.1| hypothetical protein FG07306.1 [Gibberella zeae PH-1] Length = 1427 Score = 97.3 bits (241), Expect = 1e-18, Method: Composition-based stats. Identities = 40/225 (17%), Positives = 88/225 (39%), Gaps = 33/225 (14%) Query: 2 KQYHKF---QRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKE-------- 50 K Y + + + D +G A ++ ++ +L N +D ++ Sbjct: 802 KLYKQMVTHNKLVVSDGKGGKTGARGLSNMIMQLRKLCNHPFVFDVVENVMNPLNISNDL 861 Query: 51 --VHDEKIKALEVIIE--KANAAPIIVAYHFNSDLA---------RLQKAFPQGRTL-DK 96 K + L+ I+ +A +++ + + + R++ G T D+ Sbjct: 862 LWRTSGKFELLDRILPKYQATGHRVLMFFQMTAIMDIMEDYLRYRRVEYLRLDGTTKSDE 921 Query: 97 DPCTIQEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 ++E+N K + + G GLNLQ + ++ + W+ + Q Sbjct: 922 RSDLLREFNAPDSKYFMFLLSTRAGGLGLNLQT-ADTVIIYDSDWNPHQDLQA-----QD 975 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 R + G K V + LI+ N+++E +L+R R K + ++ A + Sbjct: 976 RAHRIGQKNEVRILRLISSNSVEEKILERARFKLDMDGKVIQAGR 1020 >gi|332021363|gb|EGI61737.1| Chromatin-remodeling complex ATPase chain Iswi [Acromyrmex echinatior] Length = 1007 Score = 97.3 bits (241), Expect = 1e-18, Method: Composition-based stats. Identities = 46/230 (20%), Positives = 90/230 (39%), Gaps = 40/230 (17%) Query: 1 MKQY---HKFQRELYCDLQGENIEAFNSASKTVK------CLQL---ANGAVYYD--EEK 46 +K Y K QRE Y + ++I+ N A K K +QL N +D E Sbjct: 360 IKVYIGLSKMQREWYTKVLMKDIDIVNGAGKIEKMRLQNILMQLRKCCNHPYLFDGAEPG 419 Query: 47 HWKEVHDE------KIKALEVIIEKAN--AAPIIVAYHFNSDLARL---------QKAFP 89 + K+ L+ ++ K + +++ L L Q Sbjct: 420 PPYTTDEHLVYNCGKMVILDKLLPKLQQQESRVLIFSQMTRMLDILEDYCHWRCFQYCRL 479 Query: 90 QGRTLDKDPC-TIQEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 G T +D I E+N + + + G G+NL ++++ + W+ + Q Sbjct: 480 DGNTAHEDRQRQINEYNAPGSEKFIFMLSTRAGGLGINL-ATADVVIIYDSDWNPQMDLQ 538 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 ++R + G ++ V V+ I +NT++E +++R K + L++ Sbjct: 539 AMDR-----AHRIGQQKQVRVFRFITENTVEEKIVERAEVKLRLDKLVIQ 583 >gi|291404432|ref|XP_002718428.1| PREDICTED: BTAF1 RNA polymerase II, B-TFIID transcription factor-associated, 170kDa [Oryctolagus cuniculus] Length = 1858 Score = 97.3 bits (241), Expect = 1e-18, Method: Composition-based stats. Identities = 33/145 (22%), Positives = 57/145 (39%), Gaps = 26/145 (17%) Query: 69 APIIVAYHFNSDLA-----------------RLQKAFPQGRTLDKDPCTIQEWNEGKIPL 111 I++ S L RL + P G+ + + N+ I + Sbjct: 1654 HRILIFCQLKSMLDIVEHDLLKPHLPSVTYLRLDGSIPPGQ---RHSIVSRFNNDPSIDV 1710 Query: 112 LFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLI 171 L G GLNL G + +VF W+ Q ++R + G KR V VY LI Sbjct: 1711 LLLTTHVGGLGLNLT-GADTVVFVEHDWNPMRDLQAMDR-----AHRIGQKRVVNVYRLI 1764 Query: 172 AQNTIDELVLQRLRTKSTIQDLLLN 196 + T++E ++ + K I + +++ Sbjct: 1765 TRGTLEEKIMGLQKFKMNIANTVIS 1789 >gi|156551567|ref|XP_001601734.1| PREDICTED: similar to helicase [Nasonia vitripennis] Length = 879 Score = 97.3 bits (241), Expect = 1e-18, Method: Composition-based stats. Identities = 46/230 (20%), Positives = 89/230 (38%), Gaps = 40/230 (17%) Query: 1 MKQY---HKFQRELYCDLQGENIEAFNSASKTVK------CLQL---ANGAVYYD--EEK 46 +K Y K QRE Y + ++I+ N A K K +QL N +D E Sbjct: 232 IKVYIGLSKMQREWYTKVLMKDIDIVNGAGKIEKMRLQNILMQLRKCCNHPYLFDGAEPG 291 Query: 47 HWKEVHDE------KIKALEVIIEKANAA--PIIVAYHFNSDLARL---------QKAFP 89 + K+ L+ ++ K +++ L L Q Sbjct: 292 PPYTTDEHLVYNCGKLVILDKLLPKLQQQQSRVLIFSQMTRMLDILEDYCHWRCYQYCRL 351 Query: 90 QGRTLDKDPC-TIQEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 G T +D I E+N + + + G G+NL ++++ + W+ + Q Sbjct: 352 DGNTAHEDRQRQINEYNAPGSEKFIFMLSTRAGGLGINL-ATADVVIIYDSDWNPQMDLQ 410 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 ++R + G ++ V V+ I +NT++E +++R K + L++ Sbjct: 411 AMDR-----AHRIGQQKQVRVFRFITENTVEEKIVERAEVKLRLDKLVIQ 455 >gi|9454567|gb|AAF87890.1|AC012561_23 Similar tp transcription factors [Arabidopsis thaliana] Length = 1062 Score = 97.3 bits (241), Expect = 1e-18, Method: Composition-based stats. Identities = 26/170 (15%), Positives = 64/170 (37%), Gaps = 19/170 (11%) Query: 34 QLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPI--IVAYHFNSDLARLQKAFPQ- 90 Q+A+ + +++ + ++ + +N PI I+ + L ++ + + Sbjct: 871 QMASSSQQPNDDDDDDDDDVTIVEKTSLKSTPSNGGPIKTIIFSQWTGMLDLVELSLIEN 930 Query: 91 ----------GRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWD 140 + +D + N+ + ++ + GLN+ ++ LWW+ Sbjct: 931 SIEFRRLDGTMSLIARDRAVKEFSNDPDVKVMIMSLKAGNLGLNM-IAACHVILLDLWWN 989 Query: 141 LEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 Q I+R + G R V V + +NT+++ +L K + Sbjct: 990 PTTEDQAIDR-----AHRIGQTRPVTVTRITIKNTVEDRILALQEEKRKM 1034 >gi|66809969|ref|XP_638708.1| chromo domain-containing protein [Dictyostelium discoideum AX4] gi|60467321|gb|EAL65353.1| chromo domain-containing protein [Dictyostelium discoideum AX4] Length = 1917 Score = 97.3 bits (241), Expect = 1e-18, Method: Composition-based stats. Identities = 36/203 (17%), Positives = 75/203 (36%), Gaps = 29/203 (14%) Query: 3 QYHKFQRELYC---DLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKAL 59 Y + E DL I A K L + E H + + ++ L Sbjct: 1041 LYQNARDECELGAKDLLDSMIRASGKLVLLDKLL------IRLKETGHRVLIFSQMVRML 1094 Query: 60 EVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIP--LLFAHPA 117 +++ + + F RL + +K + +N P Sbjct: 1095 DILADYLKGRS----FQF----QRLDGSMS----REKRSQAMDRFNAVDSPDFCFLLSTK 1142 Query: 118 SCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 + G G+NL + ++ F W+ + Q R + G K V +Y L+++++++ Sbjct: 1143 AGGLGINLST-ADTVIIFDSDWNPQNDLQAEAR-----AHRIGQKNHVNIYRLVSKSSVE 1196 Query: 178 ELVLQRLRTKSTIQDLLLNALKK 200 E +L+R + K + L++ ++K Sbjct: 1197 EDILERAKQKMVLDHLVIQTMEK 1219 >gi|225463768|ref|XP_002267403.1| PREDICTED: hypothetical protein [Vitis vinifera] Length = 1036 Score = 97.3 bits (241), Expect = 1e-18, Method: Composition-based stats. Identities = 25/138 (18%), Positives = 56/138 (40%), Gaps = 17/138 (12%) Query: 64 EKANAAPIIVAYHFNSDLARLQKAF----PQGRTLDKD------PCTIQEWN-EGKIPLL 112 E IV + S L ++ + Q R LD ++++N + ++ ++ Sbjct: 877 ETEGPIKAIVFSQWTSMLDLVEMSMNHSCIQYRRLDGTMSLASRDRAVKDFNTDPEVTVM 936 Query: 113 FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIA 172 + GLN+ ++++ LWW+ Q ++R + G R V V + Sbjct: 937 LMSLKAGNLGLNM-VAASLVILLDLWWNPTTEDQAVDR-----AHRIGQTRPVTVSRITI 990 Query: 173 QNTIDELVLQRLRTKSTI 190 ++T+++ +L K + Sbjct: 991 KDTVEDRILALQEDKRKM 1008 >gi|154276746|ref|XP_001539218.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1] gi|150414291|gb|EDN09656.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1] Length = 959 Score = 97.3 bits (241), Expect = 1e-18, Method: Composition-based stats. Identities = 31/156 (19%), Positives = 58/156 (37%), Gaps = 19/156 (12%) Query: 54 EKIKALEVIIEKANAAPIIVAYHFNSDLARLQK----------AFPQGRTLDKDPCTIQE 103 + L I + +++ ++ S L L K + + Sbjct: 640 RVLDQLLHNIRHTTSEKVVLISNYTSTLDLLATFLTSLSLPFLRLDGSTPPSKRQGLVDD 699 Query: 104 WN---EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 +N + + G GLNL G + L+ F + W+ Q + RI + G Sbjct: 700 FNRSSSSSVFAFLLSAKAGGTGLNL-IGASRLILFDVDWNPATDIQAMARI-----HRDG 753 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 KR VY L+ + ++E + QR TK + D +++ Sbjct: 754 QKRHCRVYRLVLKGALEEKIWQRQVTKIGLADSVMD 789 >gi|145496081|ref|XP_001434032.1| hypothetical protein [Paramecium tetraurelia strain d4-2] gi|124401154|emb|CAK66635.1| unnamed protein product [Paramecium tetraurelia] Length = 1103 Score = 97.3 bits (241), Expect = 1e-18, Method: Composition-based stats. Identities = 25/138 (18%), Positives = 53/138 (38%), Gaps = 17/138 (12%) Query: 71 IIVAYHFNSDLARLQKAFP-----------QGRTLDKDPCTIQEWNEGKIPLLFAHPASC 119 +++ L L++ Q + D+ + KI + Sbjct: 883 VLIFCQMTRMLDILEEYMLHKGYTYFRMDGQCQINDRRDMVNEFQQNDKIFAFLLSTRAG 942 Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 G G+ L + ++F+ W+ Q +R + G + V+VY LI + TI+E Sbjct: 943 GLGITLTQ-ADAVIFYDNDWNPTMDAQATDR-----AHRIGRTKDVYVYRLITKGTIEER 996 Query: 180 VLQRLRTKSTIQDLLLNA 197 +++R + K +Q + + Sbjct: 997 IVKRAQQKQNVQSTVYSG 1014 >gi|67466735|ref|XP_649509.1| helicase [Entamoeba histolytica HM-1:IMSS] gi|56465969|gb|EAL44123.1| helicase domain-containing protein [Entamoeba histolytica HM-1:IMSS] Length = 759 Score = 97.3 bits (241), Expect = 1e-18, Method: Composition-based stats. Identities = 31/187 (16%), Positives = 63/187 (33%), Gaps = 23/187 (12%) Query: 26 ASKTVKCLQLANGAVYY----DEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNS 79 + ++ N D K+K + ++++ ++ Sbjct: 393 LAAIDTLRKICNHPHLINKTEDLTPETIYKESSKLKYVCDLLKQFKKEGHKALIFCQTRQ 452 Query: 80 DLARLQKAFPQGRTL----------DKDPCTIQEWNE-GKIPLLFAHPASCGHGLNLQYG 128 L +++ +K P I ++N + + G G+NL G Sbjct: 453 MLNIIEQMMLNENFKYLRMDGLVSSNKRPEYISQFNNDPTVLVFILTTRVGGLGINLT-G 511 Query: 129 GNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKS 188 + ++ + W+ Q ER + G R V +Y LI TI+E + Q+ K Sbjct: 512 ADRVIMYDPDWNPTVDSQAKERTL-----RIGQDRDVIIYRLICSGTIEEHIYQKQMAKE 566 Query: 189 TIQDLLL 195 + D +L Sbjct: 567 ILSDKIL 573 >gi|302893793|ref|XP_003045777.1| hypothetical protein NECHADRAFT_34187 [Nectria haematococca mpVI 77-13-4] gi|256726704|gb|EEU40064.1| hypothetical protein NECHADRAFT_34187 [Nectria haematococca mpVI 77-13-4] Length = 1722 Score = 97.3 bits (241), Expect = 1e-18, Method: Composition-based stats. Identities = 30/166 (18%), Positives = 69/166 (41%), Gaps = 19/166 (11%) Query: 44 EEKHWKEVHDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAF---------PQGR 92 +K + K++ L+ ++ +A ++ L L++ G Sbjct: 1392 PDKRLLQYDCGKLQILDKLLRKLQAGGHRALIFTQMTKVLDILEQFLNIHGHKYLRLDGA 1451 Query: 93 TLDKDPCTI-QEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 T + + +N + +I S G G+NL G + ++F+ W+ +Q +R Sbjct: 1452 TKVEQRQILTDRFNHDPRILCFILSTRSGGLGINLT-GADTVIFYDQDWNPAMDKQCQDR 1510 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + G R V +Y L++++TI+ +L++ K + D+++ Sbjct: 1511 C-----HRIGQTRDVHIYRLVSEHTIEANILRKASQKQMLDDVVIQ 1551 >gi|242062862|ref|XP_002452720.1| hypothetical protein SORBIDRAFT_04g031330 [Sorghum bicolor] gi|241932551|gb|EES05696.1| hypothetical protein SORBIDRAFT_04g031330 [Sorghum bicolor] Length = 901 Score = 97.3 bits (241), Expect = 1e-18, Method: Composition-based stats. Identities = 28/103 (27%), Positives = 51/103 (49%), Gaps = 7/103 (6%) Query: 95 DKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGV 153 ++ +Q +N K L S G G+NL G + ++F+ W+ QQ +R Sbjct: 29 EERQTLMQRFNTNPKFFLFILSTRSGGVGINL-VGADTVIFYDSDWNPAMDQQAQDRC-- 85 Query: 154 TRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + G R V +Y LI+++TI+E +L++ K + DL++ Sbjct: 86 ---HRIGQTREVHIYRLISESTIEENILKKANQKRALDDLVIQ 125 >gi|148673695|gb|EDL05642.1| mCG142038, isoform CRA_b [Mus musculus] Length = 886 Score = 97.3 bits (241), Expect = 1e-18, Method: Composition-based stats. Identities = 32/167 (19%), Positives = 68/167 (40%), Gaps = 22/167 (13%) Query: 50 EVHDEKIKALEVIIEKANA----APIIVAYHFNSDLARLQK---------AFPQGRT-LD 95 E K++ L ++ + +I+ ++ L L++ A G+T + Sbjct: 616 EEESGKLQVLVKLLAVIHELRPTEKVILVSNYRQTLNVLEEVCKRHGYACARLDGQTPVS 675 Query: 96 KDPCTIQEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGV 153 + + +N + + G GLNL GG+ L+ + + W+ Q + R+ Sbjct: 676 QRQHIVDSFNSKYSTDFIFLLSSKAGGVGLNL-IGGSHLILYDIDWNPATDIQAMSRVW- 733 Query: 154 TRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKK 200 + G K V +Y L+ TI+E + QR +K + +++ + Sbjct: 734 ----RDGQKHPVHIYRLLTTGTIEEKIYQRQISKQGLSGAVVDLTRS 776 >gi|84997840|ref|XP_953641.1| DEAD-box family helicase [Theileria annulata] gi|65304638|emb|CAI72963.1| DEAD-box family helicase, putative [Theileria annulata] Length = 1724 Score = 97.3 bits (241), Expect = 1e-18, Method: Composition-based stats. Identities = 32/151 (21%), Positives = 64/151 (42%), Gaps = 17/151 (11%) Query: 65 KANAAPIIVAYHFNSDLARLQK----------AFPQGRTLDKDPCTIQEWNEG-KIPLLF 113 K+ I+ F+ L L+ +D I +NE KI L Sbjct: 1419 KSEDHRCIIYTQFSKMLDILENWINFMGFTYIRLDGSTKIDMRQKIINRFNENTKIFLFI 1478 Query: 114 AHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQ 173 + + G G+ L G + ++F+ W+ +Q ++R + G + V VY LI + Sbjct: 1479 SSTRTGGVGITLT-GADTVIFYDTDWNPAIDRQAMDRC-----HRIGQTKDVNVYRLITE 1532 Query: 174 NTIDELVLQRLRTKSTIQDLLLNALKKETIH 204 +T++E + ++ K + DL+++ + + H Sbjct: 1533 HTVEENIWRKQLQKRKLDDLIVDQGQFDVQH 1563 >gi|88319960|ref|NP_001034645.1| fibrinogen silencer-binding protein [Mus musculus] gi|51316246|sp|Q6PFE3|RA54B_MOUSE RecName: Full=DNA repair and recombination protein RAD54B; AltName: Full=RAD54 homolog B gi|34785459|gb|AAH57604.1| RIKEN cDNA E130016E03 gene [Mus musculus] gi|123227625|emb|CAM18403.1| RAD54 homolog B (S. cerevisiae) [Mus musculus] Length = 886 Score = 97.3 bits (241), Expect = 1e-18, Method: Composition-based stats. Identities = 32/167 (19%), Positives = 68/167 (40%), Gaps = 22/167 (13%) Query: 50 EVHDEKIKALEVIIEKANA----APIIVAYHFNSDLARLQK---------AFPQGRT-LD 95 E K++ L ++ + +I+ ++ L L++ A G+T + Sbjct: 616 EEESGKLQVLVKLLAVIHELRPTEKVILVSNYRQTLNVLEEVCKRHGYACARLDGQTPVS 675 Query: 96 KDPCTIQEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGV 153 + + +N + + G GLNL GG+ L+ + + W+ Q + R+ Sbjct: 676 QRQHIVDSFNSKYSTDFIFLLSSKAGGVGLNL-IGGSHLILYDIDWNPATDIQAMSRVW- 733 Query: 154 TRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKK 200 + G K V +Y L+ TI+E + QR +K + +++ + Sbjct: 734 ----RDGQKHPVHIYRLLTTGTIEEKIYQRQISKQGLSGAVVDLTRS 776 >gi|328768005|gb|EGF78053.1| hypothetical protein BATDEDRAFT_20594 [Batrachochytrium dendrobatidis JAM81] Length = 729 Score = 97.3 bits (241), Expect = 1e-18, Method: Composition-based stats. Identities = 31/156 (19%), Positives = 60/156 (38%), Gaps = 19/156 (12%) Query: 52 HDEKIKALEV-IIE-KANAAPIIVAYHFNSDLARLQKAFPQGRTLD-----------KDP 98 K+ L+ ++E +A I+V F L L+ + Sbjct: 518 DSCKLVKLKSMLLEMRAQGDKILVFSQFVIMLDILEPVMEHLGIKYLRLDGTTPVGIRQS 577 Query: 99 CTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQ 158 + N+ +I + S G G+NL N+++ + + ++ Q +R + Sbjct: 578 MMDEFNNDPEITVFLLTTKSGGVGINLT-SANVVIMYDIDYNPHNDAQAEDR-----AHR 631 Query: 159 AGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 G RAV V+ LI N+I++ +L+ K + L Sbjct: 632 VGQTRAVTVHRLIMDNSIEQHILRLAEHKLELDAKL 667 >gi|294783586|ref|ZP_06748910.1| type III restriction enzyme, res subunit superfamily [Fusobacterium sp. 1_1_41FAA] gi|294480464|gb|EFG28241.1| type III restriction enzyme, res subunit superfamily [Fusobacterium sp. 1_1_41FAA] Length = 400 Score = 97.3 bits (241), Expect = 1e-18, Method: Composition-based stats. Identities = 39/167 (23%), Positives = 68/167 (40%), Gaps = 15/167 (8%) Query: 37 NGAVYYDEEKHWKEVH-----DEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQG 91 NG +Y + K + +K++ L+ A I++ Y+FN + ++K Sbjct: 229 NGILYDNTSKVIAGLRQSAGIKDKLEYLKE-FRANTDANILIFYNFNREAKEIKKIMKVD 287 Query: 92 RTLDKDPCTIQEWNEGKI---PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMI 148 + I ++++ + G G+ LQY ++FFS W +++ Q + Sbjct: 288 YEVSGAVSNIPKFDDYDTLKGKTTLVQIQAGGAGIELQY-NTEVIFFSPTWSYQDYSQAL 346 Query: 149 ERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 R + G K V VY I TI+E V RL K + LL Sbjct: 347 GR-----AYRIGQKNKVTVYKYIGNRTIEECVYARLDEKKDFAEKLL 388 >gi|328767223|gb|EGF77273.1| hypothetical protein BATDEDRAFT_91624 [Batrachochytrium dendrobatidis JAM81] Length = 641 Score = 97.3 bits (241), Expect = 1e-18, Method: Composition-based stats. Identities = 25/139 (17%), Positives = 54/139 (38%), Gaps = 17/139 (12%) Query: 68 AAPIIVAYHFNSDLARLQK----------AFPQGRTLDKDPCTIQEW-NEGKIPLLFAHP 116 IV F L ++ + + +I+ + ++ I ++ Sbjct: 483 GEKTIVFSQFTKMLDLIETPLGQNNIKFTRYDGSMHAKQRDDSIRRFRDDPDILVILVSL 542 Query: 117 ASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTI 176 GLNL N ++ LWW+ Q I+R + G + V V+ ++ +N++ Sbjct: 543 KCGSLGLNLTC-ANRVILTDLWWNPAVENQAIDR-----AHRFGQTKDVIVHRIMIKNSV 596 Query: 177 DELVLQRLRTKSTIQDLLL 195 ++ +L+ + K I + L Sbjct: 597 EDRILELQQRKQDIANQAL 615 >gi|255932145|ref|XP_002557629.1| Pc12g07960 [Penicillium chrysogenum Wisconsin 54-1255] gi|211582248|emb|CAP80423.1| Pc12g07960 [Penicillium chrysogenum Wisconsin 54-1255] Length = 937 Score = 97.3 bits (241), Expect = 1e-18, Method: Composition-based stats. Identities = 31/170 (18%), Positives = 68/170 (40%), Gaps = 19/170 (11%) Query: 40 VYYDEEKHWKEVHDEKIKALEVIIE-KANAAPIIVAYHFNSDLARLQ----------KAF 88 +Y DE ++ E+ KI+ L I+ +A IV F S L +++ + Sbjct: 691 IYNDEGENG-ELPSTKIRHLMRILNREAPDFKFIVFSVFTSMLDKIEPFLKTANIGFARY 749 Query: 89 PQGRTLDKDPCTIQEW-NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQM 147 G + ++++ N +L + GLNL + +V +W+ +Q Sbjct: 750 DGGMANNHREASLEKLRNNSGTRVLLCSLRAGALGLNLT-AASRVVILEPFWNPFVEEQA 808 Query: 148 IERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 I+R+ + V +Y ++ + T++E ++ K + + + Sbjct: 809 IDRV-----HRLNQTIDVKIYKMVIKGTVEERIVALQDRKRELANATIEG 853 >gi|83318941|emb|CAJ38808.1| Lodestar protein [Platynereis dumerilii] Length = 1244 Score = 97.3 bits (241), Expect = 1e-18, Method: Composition-based stats. Identities = 28/157 (17%), Positives = 64/157 (40%), Gaps = 21/157 (13%) Query: 56 IKALEVIIEKA---NAAPIIVAYHFNSDLARLQKAFPQGRTL----------DKDPCTIQ 102 ++ ++ I +++ N + ++ + L ++ K + Sbjct: 1041 LEKIKEIKKESPPGNPSKCVIVSQWTKMLDVIEYHLKSEGVQCCSIRGDMPPKKRSEIVD 1100 Query: 103 EWNEGKI--PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 +N ++ + G GLNL GGN L+ L W+ Q +RI + G Sbjct: 1101 LFNTPSSGPEVMLLSLRAGGVGLNL-IGGNHLIMVDLHWNPALEAQACDRI-----YRVG 1154 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 K+ VF++ + +NT++E + ++K + + +L+ Sbjct: 1155 QKKDVFIHRFVCKNTVEEKIQMLQKSKMALAENILSG 1191 >gi|311271626|ref|XP_001925252.2| PREDICTED: TATA-binding protein-associated factor 172 [Sus scrofa] Length = 1877 Score = 97.3 bits (241), Expect = 1e-18, Method: Composition-based stats. Identities = 33/145 (22%), Positives = 57/145 (39%), Gaps = 26/145 (17%) Query: 69 APIIVAYHFNSDLA-----------------RLQKAFPQGRTLDKDPCTIQEWNEGKIPL 111 I++ S L RL + P G+ + + N+ I + Sbjct: 1673 HRILIFCQLKSMLDIVEHDLLKPHLPSVTYLRLDGSIPPGQ---RHSIVSRFNNDPSIDV 1729 Query: 112 LFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLI 171 L G GLNL G + +VF W+ Q ++R + G KR V VY LI Sbjct: 1730 LLLTTHVGGLGLNLT-GADTVVFVEHDWNPMRDLQAMDR-----AHRIGQKRVVNVYRLI 1783 Query: 172 AQNTIDELVLQRLRTKSTIQDLLLN 196 + T++E ++ + K I + +++ Sbjct: 1784 TRGTLEEKIMGLQKFKMNIANTVIS 1808 >gi|145522682|ref|XP_001447185.1| hypothetical protein [Paramecium tetraurelia strain d4-2] gi|124414685|emb|CAK79788.1| unnamed protein product [Paramecium tetraurelia] Length = 1508 Score = 97.3 bits (241), Expect = 1e-18, Method: Composition-based stats. Identities = 33/205 (16%), Positives = 70/205 (34%), Gaps = 37/205 (18%) Query: 22 AFNSASKTV------------KCLQ-----LANGAVYYDEEKHWKEVHDEKIKALEVIIE 64 A N+AS +Q L ++ + K+ L+ ++ Sbjct: 684 AANAASLNNLEIQLRKCCNHPYLIQEMQNDLTKECQNKNDYINKLVESSGKMILLDKLLN 743 Query: 65 --KANAAPIIVAYHFNSDLARLQKAFP---------QGRTLDKDPC-TIQEWNEG--KIP 110 + +++ F L+ L++ G+ ++ I +N+ K Sbjct: 744 KFRNEGKKMLIFSQFTMMLSILEEYLKFRQVKYEKIDGQIKARERQNAIDRFNDPSKKRE 803 Query: 111 LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYL 170 + + G G+NL I+V + W+ + Q R + G + V VY L Sbjct: 804 VFLLSTKAGGQGINLT-AAEIVVIYDSDWNPQNDVQATAR-----AHRIGQSKEVTVYRL 857 Query: 171 IAQNTIDELVLQRLRTKSTIQDLLL 195 I ++T + + +R K + + Sbjct: 858 ITKDTYEAEMFERAIKKLGLDQAIF 882 >gi|238881849|gb|EEQ45487.1| DNA repair protein RAD5 [Candida albicans WO-1] Length = 1084 Score = 97.3 bits (241), Expect = 1e-18, Method: Composition-based stats. Identities = 34/159 (21%), Positives = 60/159 (37%), Gaps = 26/159 (16%) Query: 52 HDEKIKAL----EVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRT------------LD 95 KI+AL + + ++ + +IV F+S L +Q ++ Sbjct: 907 SSSKIQALVRHLKALHSQSPNSKVIVFSQFSSYLDIIQSELKLASEEFIVFKFDGRLNMN 966 Query: 96 KDPCTIQEWN----EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERI 151 ++ +N +GK+ +L + G GLNL + WW Q I+RI Sbjct: 967 DRTKLLESFNQPLEDGKVAILLLSLKAGGVGLNLTT-ASRAYMMDPWWSPSIEDQAIDRI 1025 Query: 152 GVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 + G V V I +N+I+ +L+ K I Sbjct: 1026 -----HRIGQNETVKVVRFIMENSIETKMLKIQERKKQI 1059 >gi|327356510|gb|EGE85367.1| SWI/SNF family DNA-dependent ATPase Ris1 [Ajellomyces dermatitidis ATCC 18188] Length = 1150 Score = 97.3 bits (241), Expect = 1e-18, Method: Composition-based stats. Identities = 29/213 (13%), Positives = 80/213 (37%), Gaps = 31/213 (14%) Query: 8 QRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVI---IE 64 +++ L+ + + + + ++ Y ++ ++ ++ L I I Sbjct: 936 EKKSLSQLKKQAVRNAEAKKEYIR---------YLNDNWVTSAKIEKTMETLRSIQSRIP 986 Query: 65 KANAAPI--IVAYHFNSDLARLQKAFPQ-----------GRTLDKDPCTIQEWNEGKIPL 111 + + P I+ F + L LQ + + +++ ++ + + Sbjct: 987 EGDDQPEKTIIFSQFTTLLDLLQVPIEREGWGYCRYDGSMQPSERNEAVLEFSDSKDRTI 1046 Query: 112 LFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLI 171 + + GLNL +++ +W+ +Q I+R + G R V V+ + Sbjct: 1047 MLISLKAGNSGLNLTVASQVIIL-DPFWNPYIEEQAIDR-----AHRIGQLRPVMVHRIF 1100 Query: 172 AQNTIDELVLQRLRTKSTIQDLLLNALKKETIH 204 + T+++ +L+ K + + L+ +TI Sbjct: 1101 VKGTVEDRILELQDRKRALVEGALDEKASQTIG 1133 >gi|239608047|gb|EEQ85034.1| SWI/SNF family DNA-dependent ATPase Ris1 [Ajellomyces dermatitidis ER-3] Length = 1150 Score = 97.3 bits (241), Expect = 1e-18, Method: Composition-based stats. Identities = 29/213 (13%), Positives = 80/213 (37%), Gaps = 31/213 (14%) Query: 8 QRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVI---IE 64 +++ L+ + + + + ++ Y ++ ++ ++ L I I Sbjct: 936 EKKSLSQLKKQAVRNAEAKKEYIR---------YLNDNWVTSAKIEKTMETLRSIQSRIP 986 Query: 65 KANAAPI--IVAYHFNSDLARLQKAFPQ-----------GRTLDKDPCTIQEWNEGKIPL 111 + + P I+ F + L LQ + + +++ ++ + + Sbjct: 987 EGDDQPEKTIIFSQFTTLLDLLQVPIEREGWGYCRYDGSMQPSERNEAVLEFSDSKDRTI 1046 Query: 112 LFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLI 171 + + GLNL +++ +W+ +Q I+R + G R V V+ + Sbjct: 1047 MLISLKAGNSGLNLTVASQVIIL-DPFWNPYIEEQAIDR-----AHRIGQLRPVMVHRIF 1100 Query: 172 AQNTIDELVLQRLRTKSTIQDLLLNALKKETIH 204 + T+++ +L+ K + + L+ +TI Sbjct: 1101 VKGTVEDRILELQDRKRALVEGALDEKASQTIG 1133 >gi|261200100|ref|XP_002626451.1| SWI/SNF family DNA-dependent ATPase Ris1 [Ajellomyces dermatitidis SLH14081] gi|239594659|gb|EEQ77240.1| SWI/SNF family DNA-dependent ATPase Ris1 [Ajellomyces dermatitidis SLH14081] Length = 1150 Score = 97.3 bits (241), Expect = 1e-18, Method: Composition-based stats. Identities = 29/213 (13%), Positives = 80/213 (37%), Gaps = 31/213 (14%) Query: 8 QRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVI---IE 64 +++ L+ + + + + ++ Y ++ ++ ++ L I I Sbjct: 936 EKKSLSQLKKQAVRNAEAKKEYIR---------YLNDNWVTSAKIEKTMETLRSIQSRIP 986 Query: 65 KANAAPI--IVAYHFNSDLARLQKAFPQ-----------GRTLDKDPCTIQEWNEGKIPL 111 + + P I+ F + L LQ + + +++ ++ + + Sbjct: 987 EGDDQPEKTIIFSQFTTLLDLLQVPIEREGWGYCRYDGSMQPSERNEAVLEFSDSKDRTI 1046 Query: 112 LFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLI 171 + + GLNL +++ +W+ +Q I+R + G R V V+ + Sbjct: 1047 MLISLKAGNSGLNLTVASQVIIL-DPFWNPYIEEQAIDR-----AHRIGQLRPVMVHRIF 1100 Query: 172 AQNTIDELVLQRLRTKSTIQDLLLNALKKETIH 204 + T+++ +L+ K + + L+ +TI Sbjct: 1101 VKGTVEDRILELQDRKRALVEGALDEKASQTIG 1133 >gi|254570084|ref|XP_002492152.1| Essential abundant protein involved in regulation of transcription [Pichia pastoris GS115] gi|238031949|emb|CAY69872.1| Essential abundant protein involved in regulation of transcription [Pichia pastoris GS115] gi|328351362|emb|CCA37761.1| TATA-binding protein-associated factor MOT1 [Pichia pastoris CBS 7435] Length = 1937 Score = 97.3 bits (241), Expect = 1e-18, Method: Composition-based stats. Identities = 42/186 (22%), Positives = 72/186 (38%), Gaps = 25/186 (13%) Query: 29 TVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANA----APIIVAYHFNSDLA-- 82 ++K L L G DE + + + ++ + ++ L Sbjct: 1670 SLKTLLLECGIGSSDENSEEGLGSSLRRQQ-QQLVTGSEGVISQHRALIFCQLKDMLDMV 1728 Query: 83 ---RLQKAFP-------QGRTLDKDPCTI-QEWNE-GKIPLLFAHPASCGHGLNLQYGGN 130 L+K P G T +I +++NE I LL G GLNL G + Sbjct: 1729 ENDLLRKHMPSVTYMRLDGSTDPHSRQSIVRKFNEDPSIDLLLLTTKVGGLGLNLT-GAD 1787 Query: 131 ILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 ++F W+ Q ++R + G K+ V VY LI QNT++E ++ + K I Sbjct: 1788 TVIFVEHDWNPMNDLQAMDR-----AHRLGQKKVVNVYRLITQNTLEERIMGLQKFKMNI 1842 Query: 191 QDLLLN 196 ++N Sbjct: 1843 ASSVVN 1848 >gi|149642515|ref|XP_001505934.1| PREDICTED: similar to helicase, lymphoid-specific [Ornithorhynchus anatinus] Length = 823 Score = 97.3 bits (241), Expect = 1e-18, Method: Composition-based stats. Identities = 23/159 (14%), Positives = 60/159 (37%), Gaps = 19/159 (11%) Query: 50 EVHDEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQK----------AFPQGRTLDKD 97 + K L+ ++ + +++ L L + Sbjct: 580 VTNSGKFLILDRMLPELKKRGHKVLLFSQMTMMLDILMDYCYLRSFSFSRLDGSMSYAAR 639 Query: 98 PCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 + ++N + ++ + + G G+NL + ++ + W+ + Q +R Sbjct: 640 EENMHKFNTDPEVFIFLVSTRAGGLGINLT-AADTVIIYDSDWNPQSDLQAQDRC----- 693 Query: 157 RQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 + G + V VY L+ NT+D+ +++R K ++ L++ Sbjct: 694 HRIGQTKPVVVYRLVTANTVDQKIVERAAAKRKLEKLII 732 >gi|121714457|ref|XP_001274839.1| DNA repair protein Rhp26/Rad26, putative [Aspergillus clavatus NRRL 1] gi|119402993|gb|EAW13413.1| DNA repair protein Rhp26/Rad26, putative [Aspergillus clavatus NRRL 1] Length = 1221 Score = 97.3 bits (241), Expect = 1e-18, Method: Composition-based stats. Identities = 30/163 (18%), Positives = 59/163 (36%), Gaps = 20/163 (12%) Query: 53 DEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQK-----------AFPQGRTLDKDPC 99 K++ ++ ++E + ++ L L+K + Sbjct: 759 SGKMQVVKSLLELWRDTGHKTLLFAQHRIMLDILEKFVNSLSGFNHRRMDGTTPIQHRQA 818 Query: 100 TIQEWNE-GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQ 158 + E+N + + G G+NL G + ++ + W+ Q ER + Sbjct: 819 MVDEFNNDPNLHVFLLTTKVGGLGVNLT-GADRVIIYDPDWNPSTDVQARERAW-----R 872 Query: 159 AGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 G KR V VY L+ TI+E + R K + + +L K+ Sbjct: 873 LGQKREVSVYRLMTAGTIEEKIYHRQIFKQFLTNKILKDPKQR 915 >gi|50557192|ref|XP_506004.1| YALI0F28831p [Yarrowia lipolytica] gi|49651874|emb|CAG78816.1| YALI0F28831p [Yarrowia lipolytica] Length = 920 Score = 97.3 bits (241), Expect = 1e-18, Method: Composition-based stats. Identities = 38/181 (20%), Positives = 73/181 (40%), Gaps = 22/181 (12%) Query: 28 KTVKC-LQLANGAVYYDEEKHWKEVHDEKIKALEVI--IEKANAAPIIVAYHFNSDLARL 84 + + LQ + Y EE+ W + K+K L + I K N +++ F L L Sbjct: 723 ELNRLALQFPSIEKYALEEEPW--MDAAKVKKLAEMLPIMKENNDRVLIFSQFTQCLDIL 780 Query: 85 QKAF---------PQGRTLDKDPCTIQE--WNEGKIPLLFAHPASCGHGLNLQYGGNILV 133 + G+T + + + + E I + + G G+NL N ++ Sbjct: 781 ESVLNTLGIAFLRLDGQTPVEARQDMIDKYYEETDITVFLLSTKAGGFGINL-ACANTVI 839 Query: 134 FFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDL 193 F L ++ + +Q +R + G R V V L+ + T++E +L+ TK + Sbjct: 840 IFDLSFNPHDDKQAEDR-----AHRVGQTRDVRVIRLVCKGTVEEKILELNNTKLALDKS 894 Query: 194 L 194 + Sbjct: 895 V 895 >gi|312214448|emb|CBX94440.1| hypothetical protein [Leptosphaeria maculans] Length = 1719 Score = 97.3 bits (241), Expect = 1e-18, Method: Composition-based stats. Identities = 28/166 (16%), Positives = 61/166 (36%), Gaps = 20/166 (12%) Query: 52 HDEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQKAFPQGRTLDKD----------PC 99 K+ LE+++ K +++ F L ++ + + Sbjct: 1042 ASAKLSLLEILLPKLQERGHRVLIFSQFLDMLNIIEDFLDGMQLSYQRLDGTMGSLEKQK 1101 Query: 100 TIQEWNEGKIPLL--FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 I ++N PL + G G+NL + ++ W+ + Q I R Sbjct: 1102 RIDQFNAPDSPLFAFLLSTRAGGVGINL-ATADTVIILDPDWNPHQDLQAIAR-----AH 1155 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETI 203 + G K+ V L + +++E ++Q R K + +++ L + I Sbjct: 1156 RIGQKKKVLCLQLTTRASVEEKIMQMGRKKMALDHVVVEQLDTDDI 1201 >gi|308499699|ref|XP_003112035.1| CRE-RAD-54 protein [Caenorhabditis remanei] gi|308268516|gb|EFP12469.1| CRE-RAD-54 protein [Caenorhabditis remanei] Length = 1096 Score = 97.3 bits (241), Expect = 1e-18, Method: Composition-based stats. Identities = 29/119 (24%), Positives = 50/119 (42%), Gaps = 12/119 (10%) Query: 80 DLARLQKAFPQGRTLDKDPCTIQEWNEGK--IPLLFAHPASCGHGLNLQYGGNILVFFSL 137 D RL + + + + +N+ I + G GLNL G N LV F Sbjct: 865 DFVRLDGSMS----IKQRSKIVDTFNDPSSTIFCFLLSSKAGGCGLNL-IGANRLVMFDP 919 Query: 138 WWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 W+ Q + R+ + G K+ F+Y L+A +I+E + QR K + +++ Sbjct: 920 DWNPANDDQAMARVW-----RDGQKKTCFIYRLLATGSIEEKMFQRQTHKKALSSCVVS 973 >gi|240281984|gb|EER45487.1| chromatin remodeling complex ATPase chain ISW1 [Ajellomyces capsulatus H143] Length = 1051 Score = 97.3 bits (241), Expect = 1e-18, Method: Composition-based stats. Identities = 44/239 (18%), Positives = 88/239 (36%), Gaps = 46/239 (19%) Query: 1 MKQY---HKFQRELYCDLQGENIEAFNSAS--------KTVKCLQLAN------------ 37 M Y Q + Y + ++I+A N A +QL Sbjct: 438 MNLYVGMSDMQVKWYQKILEKDIDAVNGAQGKRESKTRLLNIVMQLRKCCNHPYLFEGAE 497 Query: 38 -GAVYYDEEKHWKEVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARL---------Q 85 G Y +E + K+ L+ I+++ + +++ + L L Q Sbjct: 498 PGPPYTTDEHLI--DNAGKMVILDKILKRMKNQGSRVLIFSQMSRVLDILEDYCVFREHQ 555 Query: 86 KAFPQGRTLDKDP-CTIQEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLE 142 G T +D I E+N + + + G G+NL +I++ + W+ + Sbjct: 556 YCRIDGSTAHEDRIAAIDEYNRPGSEKFIFLLTTRAGGLGINLT-SADIVILYDSDWNPQ 614 Query: 143 EHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 Q ++R + G + V V+ + +N I+E VL+R K + L++ + + Sbjct: 615 ADLQAMDR-----AHRIGQTKQVVVFRFVTENAIEEKVLERAAQKLRLDQLVIQQGRAQ 668 >gi|190344615|gb|EDK36323.2| hypothetical protein PGUG_00421 [Meyerozyma guilliermondii ATCC 6260] Length = 497 Score = 97.3 bits (241), Expect = 1e-18, Method: Composition-based stats. Identities = 28/166 (16%), Positives = 69/166 (41%), Gaps = 19/166 (11%) Query: 44 EEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQK----------AFPQG 91 +K + K++ L +++K + ++ L L++ Sbjct: 210 PDKSLLQFDCGKLQKLAQLLQKLTSEGHRALIFTQMTKVLDILEQFLNIHGYRYMRLDGA 269 Query: 92 RTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 +++ + +N + KIP+ S G G+NL G + ++F+ W+ +Q +R Sbjct: 270 TKIEERQVLTETFNRDPKIPVFILSTRSGGLGINLT-GADTVIFYDSDWNPAMDKQCQDR 328 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + G R V +Y +++ TI+ +L++ K + ++++ Sbjct: 329 C-----HRIGQSRDVHIYRFVSEYTIESNILKKANQKRHLDNVVIQ 369 >gi|170593189|ref|XP_001901347.1| DNA excision repair protein ERCC-6 [Brugia malayi] gi|158591414|gb|EDP30027.1| DNA excision repair protein ERCC-6, putative [Brugia malayi] Length = 1103 Score = 97.3 bits (241), Expect = 1e-18, Method: Composition-based stats. Identities = 44/220 (20%), Positives = 81/220 (36%), Gaps = 32/220 (14%) Query: 2 KQYHKFQRELYCD-LQGENIEAFNSASKTVKCLQ----LANGAVYYDEEKHWKEVH---- 52 K Y ++ CD + ++AF K + G +++ + Sbjct: 499 KLYEEYLSSRECDRILSGKMDAFVGLITLRKLCNHPDLVTGGPNKFNDYDVTADEEMGFG 558 Query: 53 ----DEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAFPQGR----------TLDK 96 K++ L+ +++ K +++ L L+K Q R + Sbjct: 559 APCRSGKMQVLKALLKLWKRQGQKVLLFSQSRQMLTILEKFVIQERYEYLRMDGTTVVRS 618 Query: 97 DPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTR 155 ++E+N KI + G G+NL G N +V F W+ Q ER Sbjct: 619 RQLLVEEFNKNNKIFIFLLTTRVGGLGINLT-GANRVVIFDPDWNPSTDIQARERAW--- 674 Query: 156 QRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 + G +RAV +Y L+ TI+E + R K + + +L Sbjct: 675 --RIGQERAVTIYRLLTGGTIEEKIYHRQIFKVFLSNRIL 712 >gi|134114696|ref|XP_774056.1| hypothetical protein CNBH1020 [Cryptococcus neoformans var. neoformans B-3501A] gi|50256686|gb|EAL19409.1| hypothetical protein CNBH1020 [Cryptococcus neoformans var. neoformans B-3501A] Length = 1514 Score = 97.3 bits (241), Expect = 1e-18, Method: Composition-based stats. Identities = 26/170 (15%), Positives = 69/170 (40%), Gaps = 20/170 (11%) Query: 50 EVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQ----------KAFPQGRTLDKD 97 ++ K+ L++++ + ++ +++ L + + D Sbjct: 752 VMNSGKMVCLDMLLSRLKSDGHRVLIFSQMVRLLDIISDYMTARGYVHQRLDGTVPSDVR 811 Query: 98 PCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTR 155 +I+ +N P + G G+NL + ++ F ++ + Q + R Sbjct: 812 KKSIEHFNAPGSPDFAFLLSTRAGGLGINL-ETADTVIIFDSDYNPQNDLQAMAR----- 865 Query: 156 QRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIHV 205 + G +R V ++ L+++ TI+E +L+R K ++ ++N + H+ Sbjct: 866 AHRIGQQRHVSIFRLVSKGTIEEDILERAMRKMLLEYAIINKMDTTGAHI 915 >gi|68486386|ref|XP_712928.1| hypothetical protein CaO19.4502 [Candida albicans SC5314] gi|68486451|ref|XP_712896.1| hypothetical protein CaO19.11978 [Candida albicans SC5314] gi|46434315|gb|EAK93728.1| hypothetical protein CaO19.11978 [Candida albicans SC5314] gi|46434350|gb|EAK93762.1| hypothetical protein CaO19.4502 [Candida albicans SC5314] Length = 1915 Score = 97.3 bits (241), Expect = 1e-18, Method: Composition-based stats. Identities = 34/143 (23%), Positives = 60/143 (41%), Gaps = 20/143 (13%) Query: 68 AAPIIVAYHFNSDL-----ARLQKAFP-------QGRTLDKDPCTI-QEWNE-GKIPLLF 113 ++ L L+K P G T +D +I +++NE I +L Sbjct: 1686 EHRALIFCQLKDMLDIVENELLRKYLPSVTFMRLDGSTDPRDRQSIVRKFNEDPSIDVLL 1745 Query: 114 AHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQ 173 G GLNL G + ++F W+ Q ++R + G K+ V VY LI + Sbjct: 1746 LTTKVGGLGLNLT-GADTVIFVEHDWNPMNDLQAMDR-----AHRLGQKKVVNVYRLITK 1799 Query: 174 NTIDELVLQRLRTKSTIQDLLLN 196 +T++E ++ + K I ++N Sbjct: 1800 DTLEEKIMGLQKFKMNIASTIVN 1822 >gi|121699521|ref|XP_001268048.1| SNF2 family helicase/ATPase, putative [Aspergillus clavatus NRRL 1] gi|119396190|gb|EAW06622.1| SNF2 family helicase/ATPase, putative [Aspergillus clavatus NRRL 1] Length = 1147 Score = 97.3 bits (241), Expect = 1e-18, Method: Composition-based stats. Identities = 32/171 (18%), Positives = 66/171 (38%), Gaps = 19/171 (11%) Query: 40 VYYDEEKHWKEV-HDEKIKALEVIIE-KANAAPIIVAYHFNSDLARLQKAFPQG------ 91 +Y + +V KI+ L I+ +A+ IV F S L +++ + Sbjct: 894 IYLNPGDEDDQVLPSTKIRHLMKILRGEADEHKFIVFSVFTSMLDKIEPFLKRAGIGFAR 953 Query: 92 -----RTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 R ++ + N +L + GLNL + +V +W+ +Q Sbjct: 954 YDGSMRNDHREASLNKLRNNSATRVLLCSLRAGALGLNLT-AASRVVILEPFWNPFVEEQ 1012 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 I+R+ + V +Y +I + T++E +L+ K + +L + Sbjct: 1013 AIDRV-----HRLNQTVDVKIYKMIIKETVEERILELQDRKRELANLTIEG 1058 >gi|68472697|ref|XP_719667.1| hypothetical protein CaO19.9644 [Candida albicans SC5314] gi|68472956|ref|XP_719543.1| hypothetical protein CaO19.2097 [Candida albicans SC5314] gi|74680157|sp|Q5ACX1|RAD5_CANAL RecName: Full=DNA repair protein RAD5 gi|46441365|gb|EAL00663.1| hypothetical protein CaO19.2097 [Candida albicans SC5314] gi|46441494|gb|EAL00791.1| hypothetical protein CaO19.9644 [Candida albicans SC5314] Length = 1084 Score = 97.3 bits (241), Expect = 1e-18, Method: Composition-based stats. Identities = 34/159 (21%), Positives = 60/159 (37%), Gaps = 26/159 (16%) Query: 52 HDEKIKAL----EVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRT------------LD 95 KI+AL + + ++ + +IV F+S L +Q ++ Sbjct: 907 SSSKIQALVRHLKALHSQSPNSKVIVFSQFSSYLDIIQSELKLASEEFIVFKFDGRLNMN 966 Query: 96 KDPCTIQEWN----EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERI 151 ++ +N +GK+ +L + G GLNL + WW Q I+RI Sbjct: 967 DRTKLLESFNQPLEDGKVAILLLSLKAGGVGLNLTT-ASRAYMMDPWWSPSIEDQAIDRI 1025 Query: 152 GVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 + G V V I +N+I+ +L+ K I Sbjct: 1026 -----HRIGQNETVKVVRFIMENSIETKMLKIQERKKQI 1059 >gi|301619518|ref|XP_002939139.1| PREDICTED: TATA-binding protein-associated factor 172 [Xenopus (Silurana) tropicalis] Length = 1693 Score = 97.3 bits (241), Expect = 1e-18, Method: Composition-based stats. Identities = 34/141 (24%), Positives = 64/141 (45%), Gaps = 13/141 (9%) Query: 56 IKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAH 115 +K++ I+E+ P + + + RL P G+ + + N+ I +L Sbjct: 1496 LKSMLDIVEQDLLKPHLPSVTYL----RLDGTIPAGQ---RHSIVSRFNNDPSIDVLLLT 1548 Query: 116 PASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNT 175 G GLNL G + +VF W+ Q ++R + G KR V VY LI + T Sbjct: 1549 THVGGLGLNLT-GADTVVFVEHDWNPMRDLQAMDR-----AHRIGQKRVVNVYRLITRGT 1602 Query: 176 IDELVLQRLRTKSTIQDLLLN 196 ++E ++ + K +I + +++ Sbjct: 1603 LEEKIMGLQKFKMSIANTVIS 1623 >gi|159472859|ref|XP_001694562.1| predicted protein [Chlamydomonas reinhardtii] gi|158276786|gb|EDP02557.1| predicted protein [Chlamydomonas reinhardtii] Length = 856 Score = 97.3 bits (241), Expect = 1e-18, Method: Composition-based stats. Identities = 33/156 (21%), Positives = 66/156 (42%), Gaps = 20/156 (12%) Query: 53 DEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFP----QGRTLD------KDPCT 100 K+ L+ ++ K A +++ FN L ++ + R LD K Sbjct: 642 SGKMLVLDRLLSKLKARGHRVVLFSQFNIMLDIIEDYLVARGHKYRRLDGSTNRIKRMID 701 Query: 101 IQEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQ 158 I+++N+ I + + G G+NLQ + V F W+ + Q + R+ + Sbjct: 702 IEQFNKPNSDIFIYILCTRAGGLGVNLQT-ADTCVLFDSDWNPQWDLQAMARV-----HR 755 Query: 159 AGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 G R V VY L+++ T+++ + R K + ++ Sbjct: 756 IGQTRPVHVYRLVSEGTVEDRIQARAEGKLYLDQMV 791 >gi|126273212|ref|XP_001374884.1| PREDICTED: similar to helicase, lymphoid-specific, [Monodelphis domestica] Length = 824 Score = 97.3 bits (241), Expect = 1e-18, Method: Composition-based stats. Identities = 24/149 (16%), Positives = 57/149 (38%), Gaps = 19/149 (12%) Query: 58 ALEVIIEKANAAPIIVAYHFNSDLARLQK----------AFPQGRTLDKDPCTIQEWN-E 106 L + K +++ L L + + + ++N + Sbjct: 593 MLPEL--KNRGHKVLLFSQMTMMLDILMDYCYLRNYSFSRLDGSMSYVEREENMHKFNTD 650 Query: 107 GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVF 166 ++ L + G G+NL + ++ + W+ + Q +R + G + V Sbjct: 651 PEVFLFLVSTRAGGLGINLT-AADTVIIYDSDWNPQSDLQAQDRC-----HRIGQTKPVV 704 Query: 167 VYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 VY L+ NT+D+ +++R K ++ L++ Sbjct: 705 VYRLVTANTVDQKIVERAAAKRRLEKLII 733 >gi|325180152|emb|CCA14554.1| ATPdependent helicase putative [Albugo laibachii Nc14] Length = 945 Score = 97.3 bits (241), Expect = 1e-18, Method: Composition-based stats. Identities = 39/201 (19%), Positives = 78/201 (38%), Gaps = 25/201 (12%) Query: 6 KFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEK 65 + + E Y D Q ++ A+K ++ LQL A+ + H+ + K+K Sbjct: 709 RKELETYSDFQIHDLCVHYGANKELRNLQLPIEALLDSAKFHYLDTQLPKLKQ------- 761 Query: 66 ANAAPIIVAYHFNSDLARLQKAFP---------QGRTL-DKDPCTIQEWNEG-KIPLLFA 114 +++ + L L+ G T+ + I E+N I + Sbjct: 762 -EGHRVLIFSQWTKLLDLLEVLMKHKQYRFLRLDGSTMVETRQQLIDEYNSDQDIFVFLL 820 Query: 115 HPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQN 174 + G G+NL + ++ L ++ +Q +R + G R V +Y L+A+N Sbjct: 821 STRAGGLGINLT-AADTVILHDLDFNPTNDEQACDRC-----HRIGQTRPVSIYKLVAEN 874 Query: 175 TIDELVLQRLRTKSTIQDLLL 195 T+D + + K + +L Sbjct: 875 TVDHDIYKLGEVKRQLNHAVL 895 >gi|317034915|ref|XP_001400735.2| DNA repair protein Rhp26/Rad26 [Aspergillus niger CBS 513.88] Length = 1214 Score = 97.3 bits (241), Expect = 1e-18, Method: Composition-based stats. Identities = 33/186 (17%), Positives = 67/186 (36%), Gaps = 21/186 (11%) Query: 35 LANGAVYYDEEKHWKEVHDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQK------ 86 L N + + K++ ++ ++E K ++ L L+K Sbjct: 739 LQNHKLMSSTTGYGSGSKSGKMQVVKSLLELWKDTGHKTLLFTQHRIMLDILEKFVNSLS 798 Query: 87 -----AFPQGRTLDKDPCTIQEWNE-GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWD 140 + + E+N + + G G+NL G + ++ + W+ Sbjct: 799 GFSYRRMDGTTPIQHRQAMVDEFNNDPSLHVFLLTTKVGGLGVNLT-GADRVIIYDPDWN 857 Query: 141 LEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL-NALK 199 Q ER + G KR V VY L+ TI+E + R K + + +L + + Sbjct: 858 PSTDVQARERAW-----RLGQKRDVTVYRLMTAGTIEEKIYHRQIFKQFLTNKILRDPKQ 912 Query: 200 KETIHV 205 ++T + Sbjct: 913 RQTFQL 918 >gi|294955606|ref|XP_002788589.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983] gi|239904130|gb|EER20385.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983] Length = 1363 Score = 97.3 bits (241), Expect = 1e-18, Method: Composition-based stats. Identities = 34/171 (19%), Positives = 61/171 (35%), Gaps = 27/171 (15%) Query: 52 HDEKIKALEV----IIEKANAAPIIVAYHFNSDLAR--------------LQKAFPQGRT 93 KI AL + E+ +A +V F+ L L P + Sbjct: 1189 SSAKIDALLDEVRKMKERDPSAKGLVFSQFSRMLELVDFKLRREGISCLVLHGGIPMAQ- 1247 Query: 94 LDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGV 153 + + + + LL + G GLNLQ + + WW+ QQ I+R Sbjct: 1248 --RSNILLSFRQDPEFTLLLISLKAGGEGLNLQ-AASCVFLLDPWWNPAYEQQAIQR--- 1301 Query: 154 TRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIH 204 + G +AV I ++T++E +L K + D + ++ + Sbjct: 1302 --AHRLGQTKAVNAVRFITKDTVEERILALQEKKQLVFDGTVGGNEQGALQ 1350 >gi|322787688|gb|EFZ13700.1| hypothetical protein SINV_08345 [Solenopsis invicta] Length = 1008 Score = 97.3 bits (241), Expect = 1e-18, Method: Composition-based stats. Identities = 46/230 (20%), Positives = 90/230 (39%), Gaps = 40/230 (17%) Query: 1 MKQY---HKFQRELYCDLQGENIEAFNSASKTVK------CLQL---ANGAVYYD--EEK 46 +K Y K QRE Y + ++I+ N A K K +QL N +D E Sbjct: 361 IKVYIGLSKMQREWYTKVLMKDIDIVNGAGKIEKMRLQNILMQLRKCCNHPYLFDGAEPG 420 Query: 47 HWKEVHDE------KIKALEVIIEKAN--AAPIIVAYHFNSDLARL---------QKAFP 89 + K+ L+ ++ K + +++ L L Q Sbjct: 421 PPYTTDEHLVYNCGKMVILDKLLPKLQQQESRVLIFSQMTRMLDILEDYCHWRCFQYCRL 480 Query: 90 QGRTLDKDPC-TIQEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 G T +D I E+N + + + G G+NL ++++ + W+ + Q Sbjct: 481 DGNTAHEDRQRQINEYNAPGSEKFIFMLSTRAGGLGINL-ATADVVIIYDSDWNPQMDLQ 539 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 ++R + G ++ V V+ I +NT++E +++R K + L++ Sbjct: 540 AMDR-----AHRIGQQKQVRVFRFITENTVEEKIVERAEVKLRLDKLVIQ 584 >gi|224015246|ref|XP_002297281.1| helicase-like protein [Thalassiosira pseudonana CCMP1335] gi|220968075|gb|EED86431.1| helicase-like protein [Thalassiosira pseudonana CCMP1335] Length = 592 Score = 97.3 bits (241), Expect = 1e-18, Method: Composition-based stats. Identities = 22/149 (14%), Positives = 53/149 (35%), Gaps = 19/149 (12%) Query: 59 LEVIIEKANAAPIIVAYHFNSDLARLQK----------AFPQGRTLDKDPCTIQEWNEGK 108 L ++ I++ + L + +++ I + E Sbjct: 404 LPELV--GKGHRILLFSQWTRVLDLMHNLLESLDMKFMRLDGSTAVNERQEMIDTFTEDS 461 Query: 109 -IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFV 167 IP+ + G GLNL ++ + L ++ +R R + G K+ V + Sbjct: 462 SIPIFLLSTRAGGMGLNLT-AADVCILHDLDFN-----PFNDRQAEDRCHRIGQKKPVTI 515 Query: 168 YYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 ++ + T+DE + K + + +++ Sbjct: 516 LKMVTRGTVDEAIYSLQERKERMNEAIMD 544 >gi|189189128|ref|XP_001930903.1| chromo domain-containing protein 1 [Pyrenophora tritici-repentis Pt-1C-BFP] gi|187972509|gb|EDU40008.1| chromo domain-containing protein 1 [Pyrenophora tritici-repentis Pt-1C-BFP] Length = 1570 Score = 97.3 bits (241), Expect = 1e-18, Method: Composition-based stats. Identities = 30/178 (16%), Positives = 62/178 (34%), Gaps = 33/178 (18%) Query: 40 VYYDEEKHWKEVHDEKIKALEVIIEK---------------ANAAPIIVAYHFNSDLARL 84 ++ + E + K + L+ +I A+ +++ L L Sbjct: 726 LFPNAENKLVKPGSSKEETLKALITSSGKMMLLDRLLGKLKADGHRVLIFSQMVHMLDIL 785 Query: 85 Q----------KAFPQGRTLDKDPCTIQEWNEG--KIPLLFAHPASCGHGLNLQYGGNIL 132 + I +N + + G G+NL + + Sbjct: 786 TDYLKLRNYSFQRLDGTVPAADRKIAIDHFNAPGSEDYCFLLSTRAGGLGINLMT-ADTV 844 Query: 133 VFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 V F W+ + Q + R + G ++ V VY L++++TI+E +L+R R K + Sbjct: 845 VIFDSDWNPQADLQAMAR-----AHRIGQQKPVSVYRLVSKDTIEEEILERARNKRML 897 >gi|164655795|ref|XP_001729026.1| hypothetical protein MGL_3814 [Malassezia globosa CBS 7966] gi|159102915|gb|EDP41812.1| hypothetical protein MGL_3814 [Malassezia globosa CBS 7966] Length = 1053 Score = 97.3 bits (241), Expect = 1e-18, Method: Composition-based stats. Identities = 43/232 (18%), Positives = 83/232 (35%), Gaps = 39/232 (16%) Query: 6 KFQRELYCDLQGENIEAFNSAS--------KTVKCLQL---ANGAVYYD--------EEK 46 QR+ Y L ++IEA N A +QL N +D Sbjct: 417 DMQRKWYKSLLEKDIEAVNGALSKKEGKTRLLNIVMQLRKCCNHPYLFDGAEPGPPYTTD 476 Query: 47 HWKEVHDEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQK----------AFPQGRTL 94 + K+ L+ ++ K + +++ + L L+ Sbjct: 477 EHLVYNSGKMDILDKLLRKMKERGSRVLIFCQMSRMLDILEDYCLFREYTYCRIDGSSVH 536 Query: 95 DKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIG 152 + I E+N L + G G+NL +++V F W+ + Q ++R Sbjct: 537 EDRIAAIDEYNRPDSDKFLFLLTTRAGGLGINLT-SADVVVLFDSDWNPQADLQAMDR-- 593 Query: 153 VTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIH 204 + G K+ VFVY + ++I+E +L+R K + L++ + + Sbjct: 594 ---AHRIGQKKQVFVYRFVTDHSIEERILERAAQKLRLDQLVIQQGRSSSAQ 642 >gi|146422206|ref|XP_001487044.1| hypothetical protein PGUG_00421 [Meyerozyma guilliermondii ATCC 6260] Length = 497 Score = 97.3 bits (241), Expect = 1e-18, Method: Composition-based stats. Identities = 28/166 (16%), Positives = 69/166 (41%), Gaps = 19/166 (11%) Query: 44 EEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQK----------AFPQG 91 +K + K++ L +++K + ++ L L++ Sbjct: 210 PDKSLLQFDCGKLQKLAQLLQKLTSEGHRALIFTQMTKVLDILEQFLNIHGYRYMRLDGA 269 Query: 92 RTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 +++ + +N + KIP+ S G G+NL G + ++F+ W+ +Q +R Sbjct: 270 TKIEERQVLTETFNRDPKIPVFILSTRSGGLGINLT-GADTVIFYDSDWNPAMDKQCQDR 328 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + G R V +Y +++ TI+ +L++ K + ++++ Sbjct: 329 C-----HRIGQSRDVHIYRFVSEYTIESNILKKANQKRHLDNVVIQ 369 >gi|297687009|ref|XP_002821019.1| PREDICTED: TATA-binding protein-associated factor 172-like [Pongo abelii] Length = 1849 Score = 97.3 bits (241), Expect = 1e-18, Method: Composition-based stats. Identities = 33/145 (22%), Positives = 57/145 (39%), Gaps = 26/145 (17%) Query: 69 APIIVAYHFNSDLA-----------------RLQKAFPQGRTLDKDPCTIQEWNEGKIPL 111 I++ S L RL + P G+ + + N+ I + Sbjct: 1645 HRILIFCQLKSMLDIVEHDLLKPHLPSVTYLRLDGSIPPGQ---RHSIVSRFNNDPSIDV 1701 Query: 112 LFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLI 171 L G GLNL G + +VF W+ Q ++R + G KR V VY LI Sbjct: 1702 LLLTTHVGGLGLNLT-GADTVVFVEHDWNPMRDLQAMDR-----AHRIGQKRVVNVYRLI 1755 Query: 172 AQNTIDELVLQRLRTKSTIQDLLLN 196 + T++E ++ + K I + +++ Sbjct: 1756 TRGTLEEKIMGLQKFKMNIANTVIS 1780 >gi|302509748|ref|XP_003016834.1| hypothetical protein ARB_05127 [Arthroderma benhamiae CBS 112371] gi|291180404|gb|EFE36189.1| hypothetical protein ARB_05127 [Arthroderma benhamiae CBS 112371] Length = 1220 Score = 97.3 bits (241), Expect = 1e-18, Method: Composition-based stats. Identities = 29/163 (17%), Positives = 59/163 (36%), Gaps = 20/163 (12%) Query: 53 DEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQK-----------AFPQGRTLDKDPC 99 K++ ++ ++E K ++ L L++ + Sbjct: 731 SGKMQVVKSLLELWKDTGHKTLLFAQHRIMLDILERFIRGFDGFNYRRMDGNTPIKVRQS 790 Query: 100 TIQEWNE-GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQ 158 + E+N + + G G+NL G + ++ + W+ Q ER + Sbjct: 791 MVDEFNNNPDLHVFLLTTKVGGLGVNLT-GADRVIIYDPDWNPSTDVQARERAW-----R 844 Query: 159 AGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 G KR V +Y L+ TI+E + R K + + +L K+ Sbjct: 845 LGQKREVTIYRLMTAGTIEEKIYHRQIFKQFLTNKILRDPKQR 887 >gi|195501119|ref|XP_002097666.1| GE24355 [Drosophila yakuba] gi|194183767|gb|EDW97378.1| GE24355 [Drosophila yakuba] Length = 1925 Score = 97.3 bits (241), Expect = 1e-18, Method: Composition-based stats. Identities = 38/188 (20%), Positives = 73/188 (38%), Gaps = 34/188 (18%) Query: 33 LQLANGAVYYDEEKHWKEVHDEKIKALEVII---------EKANAAPIIVAYHFNSDLAR 83 QLA D+ +H K+ AL+ ++ E + ++ + L Sbjct: 1676 SQLALSNSSLDDIEH-----SAKLPALKQLLLDCGIGVQTESVSQHRALIFCQLKAMLDI 1730 Query: 84 -----LQKAFP-------QGRTLDKDPCTI-QEWN-EGKIPLLFAHPASCGHGLNLQYGG 129 L++ P G I +N + I +L G GLNL G Sbjct: 1731 VEHDLLRRHLPSVTYLRLDGSVPASQRQDIVNNFNSDPSIDVLLLTTMVGGLGLNLT-GA 1789 Query: 130 NILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKST 189 + ++F W+ + Q ++R + G K+ V VY LI +N+++E ++ + K Sbjct: 1790 DTVIFVEHDWNPMKDLQAMDR-----AHRIGQKKVVNVYRLITRNSLEEKIMGLQKFKIL 1844 Query: 190 IQDLLLNA 197 + +++A Sbjct: 1845 TANTVVSA 1852 >gi|150866161|ref|XP_001385659.2| snf family helicase [Scheffersomyces stipitis CBS 6054] gi|149387417|gb|ABN67630.2| snf family helicase [Scheffersomyces stipitis CBS 6054] Length = 1557 Score = 97.3 bits (241), Expect = 1e-18, Method: Composition-based stats. Identities = 30/166 (18%), Positives = 70/166 (42%), Gaps = 19/166 (11%) Query: 44 EEKHWKEVHDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAF---------PQGR 92 +K + K++ L +++ A ++ L L++ G Sbjct: 1273 PDKSLLQYDCGKLQKLAKLLQNLTAGGHRALIFTQMTKVLDILEQFLNIHGYRYSRLDGA 1332 Query: 93 TLDKDPCTI-QEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 T +D + +++N + KI + S G G+NL G + ++F+ W+ +Q +R Sbjct: 1333 TKIEDRQLLTEKFNRDPKISVFILSTRSGGLGINLT-GADTVIFYDSDWNPAMDKQCQDR 1391 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + G R V +Y +++ TI+ +L++ K + ++++ Sbjct: 1392 C-----HRIGQSRDVHIYRFVSEYTIESNILKKANQKRQLDNVVIQ 1432 >gi|58271342|ref|XP_572827.1| transcription regulator [Cryptococcus neoformans var. neoformans JEC21] gi|57229086|gb|AAW45520.1| transcription regulator, putative [Cryptococcus neoformans var. neoformans JEC21] Length = 1519 Score = 97.3 bits (241), Expect = 1e-18, Method: Composition-based stats. Identities = 26/170 (15%), Positives = 69/170 (40%), Gaps = 20/170 (11%) Query: 50 EVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQ----------KAFPQGRTLDKD 97 ++ K+ L++++ + ++ +++ L + + D Sbjct: 757 VMNSGKMVCLDMLLSRLKSDGHRVLIFSQMVRLLDIISDYMTARGYVHQRLDGTVPSDVR 816 Query: 98 PCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTR 155 +I+ +N P + G G+NL + ++ F ++ + Q + R Sbjct: 817 KKSIEHFNAPGSPDFAFLLSTRAGGLGINL-ETADTVIIFDSDYNPQNDLQAMAR----- 870 Query: 156 QRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIHV 205 + G +R V ++ L+++ TI+E +L+R K ++ ++N + H+ Sbjct: 871 AHRIGQQRHVSIFRLVSKGTIEEDILERAMRKMLLEYAIINKMDTTGAHI 920 >gi|56118945|ref|NP_001007993.1| SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5 [Xenopus (Silurana) tropicalis] gi|51704071|gb|AAH80870.1| SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5 [Xenopus (Silurana) tropicalis] Length = 1049 Score = 97.3 bits (241), Expect = 1e-18, Method: Composition-based stats. Identities = 40/230 (17%), Positives = 87/230 (37%), Gaps = 40/230 (17%) Query: 1 MKQY---HKFQRELYCDLQGENIEAFNSASKTVK------CLQL--ANGAVYYDEEKHW- 48 +K Y K QRE Y + ++I+ NS+ KT K +QL Y + Sbjct: 406 IKIYVGLSKMQREWYTKILMKDIDILNSSGKTDKMRLLNILMQLRKCCNHPYLFDGAEPG 465 Query: 49 --------KEVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQ---------KAFP 89 + K+ L+ ++ + + +++ L L+ Sbjct: 466 PPYTTDMHLVTNSGKMVVLDKLLPRLKEQGSRVLIFSQMTRVLDILEDYCMWRNYEYCRL 525 Query: 90 QGRTLDKDPCT-IQEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 G+T ++ I +N + + G G+NL ++++ + W+ + Q Sbjct: 526 DGQTPHEERQDSIIAYNAPGSSKFIFMLSTRAGGLGINL-ATADVVIIYDSDWNPQVDLQ 584 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 ++R + G + V V+ I NT++E +++R K + +++ Sbjct: 585 AMDR-----AHRIGQTKTVRVFRYITDNTVEERIVERAEMKLRLDSIVIQ 629 >gi|302652597|ref|XP_003018145.1| hypothetical protein TRV_07841 [Trichophyton verrucosum HKI 0517] gi|291181757|gb|EFE37500.1| hypothetical protein TRV_07841 [Trichophyton verrucosum HKI 0517] Length = 1240 Score = 97.3 bits (241), Expect = 1e-18, Method: Composition-based stats. Identities = 29/163 (17%), Positives = 59/163 (36%), Gaps = 20/163 (12%) Query: 53 DEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQK-----------AFPQGRTLDKDPC 99 K++ ++ ++E K ++ L L++ + Sbjct: 751 SGKMQVVKSLLELWKDTGHKTLLFAQHRIMLDILERFIRGFDGFNYRRMDGNTPIKVRQS 810 Query: 100 TIQEWNE-GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQ 158 + E+N + + G G+NL G + ++ + W+ Q ER + Sbjct: 811 MVDEFNNDPDLHVFLLTTKVGGLGVNLT-GADRVIIYDPDWNPSTDVQARERAW-----R 864 Query: 159 AGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 G KR V +Y L+ TI+E + R K + + +L K+ Sbjct: 865 LGQKREVTIYRLMTAGTIEEKIYHRQIFKQFLTNKILRDPKQR 907 >gi|226289757|gb|EEH45241.1| DNA repair and recombination protein RAD26 [Paracoccidioides brasiliensis Pb18] Length = 1236 Score = 97.3 bits (241), Expect = 1e-18, Method: Composition-based stats. Identities = 30/163 (18%), Positives = 60/163 (36%), Gaps = 20/163 (12%) Query: 53 DEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQ-----------KAFPQGRTLDKDPC 99 K++ ++ ++E K ++ L L+ + + Sbjct: 765 SGKMQVVKALLELWKETGHKSLLFAQHRIMLDILERFIKSMTGFKYQRMDGNTPIKLRQS 824 Query: 100 TIQEWNE-GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQ 158 + E+N +I + G G+NL G + ++ + W+ Q ER + Sbjct: 825 LVDEFNNNPEIHIFLLTTKVGGLGVNLT-GADRVIIYDPDWNPSTDVQARERAW-----R 878 Query: 159 AGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 G KR V +Y L+ TI+E + R K + + +L K+ Sbjct: 879 LGQKREVTIYRLMTAGTIEEKIYHRQIFKQFLTNKILRDPKQR 921 >gi|213408777|ref|XP_002175159.1| chromodomain helicase hrp1 [Schizosaccharomyces japonicus yFS275] gi|212003206|gb|EEB08866.1| chromodomain helicase hrp1 [Schizosaccharomyces japonicus yFS275] Length = 1354 Score = 97.3 bits (241), Expect = 1e-18, Method: Composition-based stats. Identities = 35/172 (20%), Positives = 68/172 (39%), Gaps = 26/172 (15%) Query: 27 SKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQK 86 K LQ ++ H + + +K L ++ E N + Y+F RL Sbjct: 651 VLLDKLLQ------RLKQDGHRVLIFTQMVKVLNILAEYMN----LRGYNF----QRLDG 696 Query: 87 AFPQGRTLDKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEH 144 P I +N P + + G G+NL + ++ F W+ + Sbjct: 697 TIPAPV----RRLAIDHFNSPDSPDFVFLLSTRAGGLGINLST-ADTVIIFDSDWNPQAD 751 Query: 145 QQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 Q + R + G K V VY ++++T++E +L+R R K ++ +++ Sbjct: 752 LQAMAR-----AHRIGQKNHVSVYRFLSKDTVEEDILERARRKMILEYAIIS 798 >gi|241951336|ref|XP_002418390.1| TATA-binding protein-associated factor, putative; TBP-associated factor, putative; helicase, putative; modifier of transcription, putative [Candida dubliniensis CD36] gi|223641729|emb|CAX43690.1| TATA-binding protein-associated factor, putative [Candida dubliniensis CD36] Length = 1918 Score = 97.3 bits (241), Expect = 1e-18, Method: Composition-based stats. Identities = 34/143 (23%), Positives = 60/143 (41%), Gaps = 20/143 (13%) Query: 68 AAPIIVAYHFNSDL-----ARLQKAFP-------QGRTLDKDPCTI-QEWNE-GKIPLLF 113 ++ L L+K P G T +D +I +++NE I +L Sbjct: 1686 EHRALIFCQLKDMLDIVENELLRKYLPSVTFMRLDGSTDPRDRQSIVRKFNEDPSIDVLL 1745 Query: 114 AHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQ 173 G GLNL G + ++F W+ Q ++R + G K+ V VY LI + Sbjct: 1746 LTTKVGGLGLNLT-GADTVIFVEHDWNPMNDLQAMDR-----AHRLGQKKVVNVYRLITK 1799 Query: 174 NTIDELVLQRLRTKSTIQDLLLN 196 +T++E ++ + K I ++N Sbjct: 1800 DTLEEKIMGLQKFKMNIASTIVN 1822 >gi|255935291|ref|XP_002558672.1| Pc13g02310 [Penicillium chrysogenum Wisconsin 54-1255] gi|211583292|emb|CAP91300.1| Pc13g02310 [Penicillium chrysogenum Wisconsin 54-1255] Length = 1908 Score = 97.3 bits (241), Expect = 1e-18, Method: Composition-based stats. Identities = 39/209 (18%), Positives = 73/209 (34%), Gaps = 30/209 (14%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEV 61 KQY++ + + + NI + A K L D + ++ Sbjct: 1633 KQYNEV--QSFLSAKRSNIRDVSHAPKLNALKDL-----LVDCGIGLDHTAEGELDTGAS 1685 Query: 62 IIEKANAAPIIVAYHFNSDLARLQK-------------AFPQGRTLDKDPCTIQEWN-EG 107 + +V L +Q G K + +N + Sbjct: 1686 YVSP---HRALVFCQMKEMLDIVQNDVLKKLLPSVQYLRLDGGVEATKRQDIVNRFNTDP 1742 Query: 108 KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFV 167 +L + G GLNL G + ++F W+ ++ Q ++R + G K+ V V Sbjct: 1743 SYDVLLLTTSVGGLGLNLT-GADTVIFVEHDWNPQKDIQAMDR-----AHRIGQKKVVNV 1796 Query: 168 YYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 Y LI + T++E +L R K + ++N Sbjct: 1797 YRLITRGTLEEKILNLQRFKIDVASTVVN 1825 >gi|301105731|ref|XP_002901949.1| conserved hypothetical protein [Phytophthora infestans T30-4] gi|262099287|gb|EEY57339.1| conserved hypothetical protein [Phytophthora infestans T30-4] Length = 744 Score = 97.3 bits (241), Expect = 1e-18, Method: Composition-based stats. Identities = 39/240 (16%), Positives = 89/240 (37%), Gaps = 54/240 (22%) Query: 2 KQYHKFQRELYCDLQGEN-------IEAFNSASKTVKCLQL---------------ANGA 39 ++Y++ R+ E +AFN+ + K +QL A G Sbjct: 420 REYYQMIRDGTLAKAMEEKYGKFQAQKAFNTTTLRNKMMQLRKCCLHPYLFDEPLTAGGD 479 Query: 40 VYYDEEKHWKEVHDEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQKAF--------- 88 V DE K+ L+ ++ + +++ + L+ F Sbjct: 480 VVTDE---RMIETSGKLSILDRMLRQLKRKGHKVLIFSQMTRMMDILEDYFRMREYSYCR 536 Query: 89 PQGRTLDKDPCT-IQEWN-----------EGKIPLLFAHPASCGHGLNLQYGGNILVFFS 136 G T D ++++N + + + + G G+NL + ++F+ Sbjct: 537 LDGSTKLMDRVDQMEKFNKVSAGSGSANDDDNVFVFMLSTRAGGLGINL-IAADTVIFYD 595 Query: 137 LWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 W+ ++ Q ++R + G K + VY L+ +N+ ++ + QR K ++ +++ Sbjct: 596 SDWNPQQDNQAMDRC-----HRIGQKNEIIVYRLVTENSFEDRMTQRAFEKRKLERVVIQ 650 >gi|27477070|ref|NP_003963.1| TATA-binding protein-associated factor 172 [Homo sapiens] gi|12643543|sp|O14981|BTAF1_HUMAN RecName: Full=TATA-binding protein-associated factor 172; AltName: Full=ATP-dependent helicase BTAF1; AltName: Full=B-TFIID transcription factor-associated 170 kDa subunit; AltName: Full=TAF(II)170; AltName: Full=TBP-associated factor 172; Short=TAF-172 gi|2920587|gb|AAC04573.1| TBP-associated factor 172 [Homo sapiens] gi|2995136|emb|CAA04475.1| TBP associated factor [Homo sapiens] gi|55959634|emb|CAI14103.1| BTAF1 RNA polymerase II, B-TFIID transcription factor-associated, 170kDa (Mot1 homolog, S. cerevisiae) [Homo sapiens] gi|85567637|gb|AAI12202.1| BTAF1 RNA polymerase II, B-TFIID transcription factor-associated, 170kDa [Homo sapiens] gi|119570487|gb|EAW50102.1| BTAF1 RNA polymerase II, B-TFIID transcription factor-associated, 170kDa (Mot1 homolog, S. cerevisiae), isoform CRA_a [Homo sapiens] gi|119570488|gb|EAW50103.1| BTAF1 RNA polymerase II, B-TFIID transcription factor-associated, 170kDa (Mot1 homolog, S. cerevisiae), isoform CRA_a [Homo sapiens] Length = 1849 Score = 97.3 bits (241), Expect = 1e-18, Method: Composition-based stats. Identities = 33/145 (22%), Positives = 57/145 (39%), Gaps = 26/145 (17%) Query: 69 APIIVAYHFNSDLA-----------------RLQKAFPQGRTLDKDPCTIQEWNEGKIPL 111 I++ S L RL + P G+ + + N+ I + Sbjct: 1645 HRILIFCQLKSMLDIVEHDLLKPHLPSVTYLRLDGSIPPGQ---RHSIVSRFNNDPSIDV 1701 Query: 112 LFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLI 171 L G GLNL G + +VF W+ Q ++R + G KR V VY LI Sbjct: 1702 LLLTTHVGGLGLNLT-GADTVVFVEHDWNPMRDLQAMDR-----AHRIGQKRVVNVYRLI 1755 Query: 172 AQNTIDELVLQRLRTKSTIQDLLLN 196 + T++E ++ + K I + +++ Sbjct: 1756 TRGTLEEKIMGLQKFKMNIANTVIS 1780 >gi|303279062|ref|XP_003058824.1| SNF2 super family [Micromonas pusilla CCMP1545] gi|226459984|gb|EEH57279.1| SNF2 super family [Micromonas pusilla CCMP1545] Length = 828 Score = 97.3 bits (241), Expect = 1e-18, Method: Composition-based stats. Identities = 32/166 (19%), Positives = 57/166 (34%), Gaps = 31/166 (18%) Query: 52 HDEKIKALEVIIEKA----NAAPIIVAYHFNSDLA--------------RLQKAFPQGRT 93 K+ AL + A +V F + L R+ A P Sbjct: 668 PSAKVTALVDRLRADLGGEPGAKAVVFSQFVAFLDIARDACAAAGFKTCRITGAVPVAE- 726 Query: 94 LDKDPCTIQEW--NEGKIP-LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 I+ + N P ++F + G G+NL + + WW+ +Q ++R Sbjct: 727 ---RERVIRSFQSNASDAPDVVFVSLKAGGVGINLT-AASKVYMLDPWWNPAVEEQAMDR 782 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + + G + V V A +TI+E +L+ R K + Sbjct: 783 V-----HRLGQTKDVTVVRFAATDTIEEKMLELQRRKRELARAAFE 823 >gi|147765952|emb|CAN67815.1| hypothetical protein VITISV_002502 [Vitis vinifera] Length = 1249 Score = 97.3 bits (241), Expect = 1e-18, Method: Composition-based stats. Identities = 31/142 (21%), Positives = 51/142 (35%), Gaps = 17/142 (11%) Query: 65 KANAAPIIVAYHFNSDLARLQ----------KAFPQGRTLDKDPCTIQEWNE-GKIPLLF 113 K +++ L L+ + + I E+N+ + + Sbjct: 776 KEQGHRVLLFAQTQQMLDILENFLIAGGYVYRRMDGFTPIKHRMALIDEFNDSDDVFIFI 835 Query: 114 AHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQ 173 G G NL G N ++ + W+ Q ER + G R V VY LI + Sbjct: 836 LTTKVGGLGTNLT-GANRVIIYDPDWNPSTDMQARERAW-----RIGQTRDVTVYRLITR 889 Query: 174 NTIDELVLQRLRTKSTIQDLLL 195 TI+E V QR K + + +L Sbjct: 890 GTIEEKVYQRQIYKHFLTNKIL 911 >gi|15224228|ref|NP_179466.1| CHR8 (chromatin remodeling 8); ATP binding / DNA binding / helicase/ nucleic acid binding [Arabidopsis thaliana] gi|4185142|gb|AAD08945.1| putative SNF2/RAD54 family DNA repair and recombination protein [Arabidopsis thaliana] gi|330251711|gb|AEC06805.1| DNA excision repair protein E [Arabidopsis thaliana] Length = 1187 Score = 97.3 bits (241), Expect = 1e-18, Method: Composition-based stats. Identities = 33/156 (21%), Positives = 58/156 (37%), Gaps = 19/156 (12%) Query: 53 DEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQ----------KAFPQGRTLDKDPCT 100 K+K + +++ K +++ L L+ + + + Sbjct: 726 SGKMKVVAEVLKVWKQQGHRVLLFSQTQQMLDILESFLVANEYSYRRMDGLTPVKQRMAL 785 Query: 101 IQEWNEG-KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQA 159 I E+N + + G G NL G N ++ F W+ Q ER + Sbjct: 786 IDEFNNSEDMFVFVLTTKVGGLGTNLT-GANRVIIFDPDWNPSNDMQARERAW-----RI 839 Query: 160 GFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 G K+ V VY LI + TI+E V R K + + +L Sbjct: 840 GQKKDVTVYRLITRGTIEEKVYHRQIYKHFLTNKIL 875 >gi|327351572|gb|EGE80429.1| chromatin remodeling complex subunit [Ajellomyces dermatitidis ATCC 18188] Length = 1542 Score = 97.3 bits (241), Expect = 1e-18, Method: Composition-based stats. Identities = 26/164 (15%), Positives = 63/164 (38%), Gaps = 20/164 (12%) Query: 52 HDEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQKAFPQGRTLDKD----------PC 99 K++ LE+++ K +++ F +L ++ L + Sbjct: 1006 ASSKLQLLEMLLPKLQERGHRVLIFSQFLDNLDVVEDFLDGLGLLHRRLDGSMSSLQKQK 1065 Query: 100 TIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 I ++N P S G G+NL + ++ ++ + Q + R Sbjct: 1066 QIDDFNAPDSPYFAFLLSTRSGGVGINL-ATADTVIIMDPDFNPHQDIQALSR-----AH 1119 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 + G ++ V V+ L+ + + +E ++Q + K + +L+ + E Sbjct: 1120 RIGQRKKVLVFQLVTKGSAEEKIMQIGKKKMALDQVLIEHMDAE 1163 >gi|261197277|ref|XP_002625041.1| chromatin remodeling complex subunit [Ajellomyces dermatitidis SLH14081] gi|239595671|gb|EEQ78252.1| chromatin remodeling complex subunit [Ajellomyces dermatitidis SLH14081] Length = 1542 Score = 97.3 bits (241), Expect = 1e-18, Method: Composition-based stats. Identities = 26/164 (15%), Positives = 63/164 (38%), Gaps = 20/164 (12%) Query: 52 HDEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQKAFPQGRTLDKD----------PC 99 K++ LE+++ K +++ F +L ++ L + Sbjct: 1006 ASSKLQLLEMLLPKLQERGHRVLIFSQFLDNLDVVEDFLDGLGLLHRRLDGSMSSLQKQK 1065 Query: 100 TIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 I ++N P S G G+NL + ++ ++ + Q + R Sbjct: 1066 QIDDFNAPDSPYFAFLLSTRSGGVGINL-ATADTVIIMDPDFNPHQDIQALSR-----AH 1119 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 + G ++ V V+ L+ + + +E ++Q + K + +L+ + E Sbjct: 1120 RIGQRKKVLVFQLVTKGSAEEKIMQIGKKKMALDQVLIEHMDAE 1163 >gi|115446443|ref|NP_001047001.1| Os02g0527100 [Oryza sativa Japonica Group] gi|49388292|dbj|BAD25407.1| putative DNA repair protein rad8 [Oryza sativa Japonica Group] gi|113536532|dbj|BAF08915.1| Os02g0527100 [Oryza sativa Japonica Group] Length = 810 Score = 96.9 bits (240), Expect = 1e-18, Method: Composition-based stats. Identities = 41/160 (25%), Positives = 65/160 (40%), Gaps = 21/160 (13%) Query: 42 YDEEKHWKEVHDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQ-----KAFPQGRT- 93 D EK+W E KI L +E + + A I+ + + L LQ F R Sbjct: 634 IDVEKNWVE--SSKISFLLQELEVLRTSGAKSIIFSQWTAFLDLLQIPLSRHNFSFARLD 691 Query: 94 ----LDKDPCTIQEWNEGK-IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMI 148 L + I+E++E K I +L + G G+NL N V WW+ +Q I Sbjct: 692 GTLNLQQREKVIKEFSEDKSILVLLMSLKAGGVGINLTAASNAFVM-DPWWNPAVEEQAI 750 Query: 149 ERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKS 188 RI + G ++V + I + T++E + K Sbjct: 751 MRI-----HRIGQTKSVSIKRFIVKGTVEERMEAVQARKQ 785 >gi|322790023|gb|EFZ15099.1| hypothetical protein SINV_15320 [Solenopsis invicta] Length = 3700 Score = 96.9 bits (240), Expect = 1e-18, Method: Composition-based stats. Identities = 30/156 (19%), Positives = 65/156 (41%), Gaps = 19/156 (12%) Query: 55 KIKALEVIIEK--ANAAPIIVAYHFNSDLARLQK----------AFPQGRTLDKDPCTIQ 102 K+++L+ ++ K + +++ L L+ +D+ ++ Sbjct: 1554 KLQSLDCLLRKLKSGNHRVLIFTQMTRMLDVLEAFLNFHGHIYLRLDGTTRVDQRQILME 1613 Query: 103 EWNEGK-IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGF 161 +N K I S G G+NL G + ++F+ W+ Q +R + G Sbjct: 1614 RFNGDKRIFCFILSTRSGGVGVNLT-GADTVIFYDSDWNPTMDAQAQDRC-----HRIGQ 1667 Query: 162 KRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 R V +Y L+++ T++E +L++ K + DL + Sbjct: 1668 TRDVHIYRLVSEKTVEENILKKANQKRLLGDLAIEG 1703 >gi|330916188|ref|XP_003297327.1| hypothetical protein PTT_07688 [Pyrenophora teres f. teres 0-1] gi|311330071|gb|EFQ94584.1| hypothetical protein PTT_07688 [Pyrenophora teres f. teres 0-1] Length = 1580 Score = 96.9 bits (240), Expect = 1e-18, Method: Composition-based stats. Identities = 30/178 (16%), Positives = 62/178 (34%), Gaps = 33/178 (18%) Query: 40 VYYDEEKHWKEVHDEKIKALEVIIEK---------------ANAAPIIVAYHFNSDLARL 84 ++ + E + K + L+ +I A+ +++ L L Sbjct: 736 LFPNAENKLVKPGSSKEETLKALITSSGKMMLLDRLLGKLKADGHRVLIFSQMVHMLDIL 795 Query: 85 Q----------KAFPQGRTLDKDPCTIQEWNEG--KIPLLFAHPASCGHGLNLQYGGNIL 132 + I +N + + G G+NL + + Sbjct: 796 TDYLKLRNYSFQRLDGTVPAADRKIAIDHFNAPGSEDYCFLLSTRAGGLGINLMT-ADTV 854 Query: 133 VFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 V F W+ + Q + R + G ++ V VY L++++TI+E +L+R R K + Sbjct: 855 VIFDSDWNPQADLQAMAR-----AHRIGQQKPVSVYRLVSKDTIEEEILERARNKRML 907 >gi|291235335|ref|XP_002737602.1| PREDICTED: DNA excision repair protein ERCC-6-like [Saccoglossus kowalevskii] Length = 2298 Score = 96.9 bits (240), Expect = 1e-18, Method: Composition-based stats. Identities = 36/197 (18%), Positives = 69/197 (35%), Gaps = 26/197 (13%) Query: 12 YCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWK----EVHDEKIKALEVIIE--K 65 +L+GE + + S T Q+++ D + K+ L ++E + Sbjct: 433 MLNLEGEECDPYGDYSDTA--SQISSSECAADNIDNVSISALVEESGKLVVLISLLENLR 490 Query: 66 ANAAPIIVAYHFNSDLARLQKAFPQ-----------GRTLDKDPCTIQEWN-EGKIPLLF 113 +V L +QK + R L+ I ++ + Sbjct: 491 DEGHRTLVFSQSKKMLDIMQKVLEEKNFKLIRIDGSIRKLEDREKLINKFQRNSSYSVFL 550 Query: 114 AHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQ 173 G GL L + +V F W+ Q ++R + G K+ V +Y LI Sbjct: 551 LTTGVGGIGLTLT-AADRVVIFDPSWNPATDSQAVDR-----AYRLGQKKTVVIYRLITC 604 Query: 174 NTIDELVLQRLRTKSTI 190 +++E + +R K +I Sbjct: 605 GSVEEKIYRRQIFKDSI 621 >gi|19114237|ref|NP_593325.1| fun thirty related protein Fft1 [Schizosaccharomyces pombe 972h-] gi|74676241|sp|P87114|FFT1_SCHPO RecName: Full=Uncharacterized ATP-dependent helicase fft1; AltName: Full=Fun thirty-related protein 1 gi|2094863|emb|CAB08602.1| fun thirty related protein Fft1 [Schizosaccharomyces pombe] Length = 944 Score = 96.9 bits (240), Expect = 1e-18, Method: Composition-based stats. Identities = 36/162 (22%), Positives = 66/162 (40%), Gaps = 20/162 (12%) Query: 45 EKHWKEVHDEKIKALEVIIEKAN-AAPIIVAYHFNSDLARLQK----------AFPQGRT 93 K W + K+K L +++K+ I++ F L L+ Sbjct: 758 GKPW--MDSAKVKKLCSLLKKSRPNERILIFSQFTQVLDILEYVLNTLDLEFLRLDGSTP 815 Query: 94 LDKDPCTIQEWNEGKI-PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIG 152 ++ I +++ + + S G G+NL NI++ F ++ + Q +R Sbjct: 816 VETRQQLIDDFHTNENYKVFLLSTKSGGFGINLTC-ANIVILFDCSFNPFDDMQAEDR-- 872 Query: 153 VTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 + G R V VY LI +NTI+E + + TK T++ L Sbjct: 873 ---AHRVGQTRPVHVYRLITKNTIEENIRRLANTKLTLESSL 911 >gi|297301486|ref|XP_002805795.1| PREDICTED: TATA-binding protein-associated factor 172-like [Macaca mulatta] Length = 1811 Score = 96.9 bits (240), Expect = 1e-18, Method: Composition-based stats. Identities = 33/145 (22%), Positives = 57/145 (39%), Gaps = 26/145 (17%) Query: 69 APIIVAYHFNSDLA-----------------RLQKAFPQGRTLDKDPCTIQEWNEGKIPL 111 I++ S L RL + P G+ + + N+ I + Sbjct: 1607 HRILIFCQLKSMLDIVEHDLLKPHLPSVTYLRLDGSIPPGQ---RHSIVSRFNNDPSIDV 1663 Query: 112 LFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLI 171 L G GLNL G + +VF W+ Q ++R + G KR V VY LI Sbjct: 1664 LLLTTHVGGLGLNLT-GADTVVFVEHDWNPMRDLQAMDR-----AHRIGQKRVVNVYRLI 1717 Query: 172 AQNTIDELVLQRLRTKSTIQDLLLN 196 + T++E ++ + K I + +++ Sbjct: 1718 TRGTLEEKIMGLQKFKMNIANTVIS 1742 >gi|296414553|ref|XP_002836963.1| hypothetical protein [Tuber melanosporum Mel28] gi|295632810|emb|CAZ81154.1| unnamed protein product [Tuber melanosporum] Length = 1645 Score = 96.9 bits (240), Expect = 1e-18, Method: Composition-based stats. Identities = 27/142 (19%), Positives = 55/142 (38%), Gaps = 20/142 (14%) Query: 69 APIIVAYHFNSDLARLQK-------------AFPQGRTLDKDPCTIQEWN-EGKIPLLFA 114 ++ L ++ G K + ++N + I +L Sbjct: 1431 HRALIFCQLKEMLDIVENDVLKKLLPSVSYLRMDGGTEARKRQDIVTKFNGDPSIDVLLL 1490 Query: 115 HPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQN 174 G GLNL G + ++F W+ ++ Q ++R + G K+ V VY L+ + Sbjct: 1491 TTHVGGLGLNLT-GADTVIFVEHDWNPQKDMQAMDR-----AHRIGQKKVVNVYRLVTRG 1544 Query: 175 TIDELVLQRLRTKSTIQDLLLN 196 T++E ++ R K + ++N Sbjct: 1545 TLEEKIMSLQRFKLDVASTVVN 1566 >gi|296414511|ref|XP_002836943.1| hypothetical protein [Tuber melanosporum Mel28] gi|295632788|emb|CAZ81134.1| unnamed protein product [Tuber melanosporum] Length = 1444 Score = 96.9 bits (240), Expect = 1e-18, Method: Composition-based stats. Identities = 33/159 (20%), Positives = 63/159 (39%), Gaps = 20/159 (12%) Query: 52 HDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQ----------KAFPQGRTLDKDPC 99 K+ L+ ++ K A+ ++V L L + Sbjct: 736 SSGKMVLLDQLLTKLKADNHRVLVFSQMVHMLDILADYLNLKGFSFQRLDGTIAAGPRRI 795 Query: 100 TIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 I +N + P + G G+NL + ++ F W+ + Q + R Sbjct: 796 AIDHFNAPESPDFCFLLSTRAGGLGINLMT-ADTVILFDSDWNPQADLQAMAR-----AH 849 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + G K V VY L++++TI+E VL+R R K ++ L+++ Sbjct: 850 RIGQKAHVMVYRLVSKDTIEEEVLERARNKMILEHLVIS 888 >gi|225681199|gb|EEH19483.1| DNA repair protein RAD5 [Paracoccidioides brasiliensis Pb03] Length = 1083 Score = 96.9 bits (240), Expect = 1e-18, Method: Composition-based stats. Identities = 34/167 (20%), Positives = 63/167 (37%), Gaps = 18/167 (10%) Query: 43 DEEKHWKEVHDEKIKALEVIIEKANAA-PIIVAYHFNSDLARLQKAFP-----QGRTLDK 96 DE + + KI+ L I++K + IV F S L +++ R Sbjct: 825 DEPETPDHLASTKIRHLMKILKKESGDYKFIVFSFFTSMLTKIEPFLKGANIGYARYDGA 884 Query: 97 DPCTIQEW------NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 ++E N K +L + GLNL + +V +W+ +Q I+R Sbjct: 885 MRNDMRENSLDRLRNSPKTRVLLCSLRAGSLGLNLT-AASRVVILEPFWNPFVEEQAIDR 943 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + + V VY L +NT++E ++ K + + + Sbjct: 944 V-----HRLNQTIDVKVYKLTIRNTVEERIVDLQEHKRELANATIEG 985 >gi|322710752|gb|EFZ02326.1| DNA repair protein Rhp26/Rad26, putative [Metarhizium anisopliae ARSEF 23] Length = 1162 Score = 96.9 bits (240), Expect = 1e-18, Method: Composition-based stats. Identities = 32/163 (19%), Positives = 62/163 (38%), Gaps = 20/163 (12%) Query: 53 DEKIKALEVIIEKA---NAAPIIVAYHFNSDLARLQKAF---------PQGRT-LDKDPC 99 K++ + +++K N ++ L ++K G T +D+ Sbjct: 728 SAKLELTKDLLQKVMIPNGHKTLLFSQGKLMLNIIEKCMRECNISYLRLDGETPVDQRQP 787 Query: 100 TIQEWNEG-KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQ 158 I +N I + + G G NL G + ++ F W+ Q ER + Sbjct: 788 MIDRFNTDLSIHVFLMTTRTGGLGTNLT-GADRIIIFDPDWNPSTDLQARERAW-----R 841 Query: 159 AGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 G + V +Y L+ + TI+E + R K + + +L K+ Sbjct: 842 LGQNKPVKIYRLMTEGTIEEKIYHRQIFKQFMTNKVLKDPKQR 884 >gi|296220759|ref|XP_002756460.1| PREDICTED: TATA-binding protein-associated factor 172 [Callithrix jacchus] Length = 1849 Score = 96.9 bits (240), Expect = 1e-18, Method: Composition-based stats. Identities = 33/145 (22%), Positives = 57/145 (39%), Gaps = 26/145 (17%) Query: 69 APIIVAYHFNSDLA-----------------RLQKAFPQGRTLDKDPCTIQEWNEGKIPL 111 I++ S L RL + P G+ + + N+ I + Sbjct: 1645 HRILIFCQLKSMLDIVEHDLLKPHLPSVTYLRLDGSIPPGQ---RHSIVSRFNNDPSIDV 1701 Query: 112 LFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLI 171 L G GLNL G + +VF W+ Q ++R + G KR V VY LI Sbjct: 1702 LLLTTHVGGLGLNLT-GADTVVFVEHDWNPMRDLQAMDR-----AHRIGQKRVVNVYRLI 1755 Query: 172 AQNTIDELVLQRLRTKSTIQDLLLN 196 + T++E ++ + K I + +++ Sbjct: 1756 TRGTLEEKIMGLQKFKMNIANTVIS 1780 >gi|300793896|ref|NP_001178846.1| TATA-binding protein-associated factor 172 [Rattus norvegicus] gi|293344714|ref|XP_001080159.2| PREDICTED: BTAF1 RNA polymerase II, B-TFIID transcription factor-associated, (Mot1 homolog, S. cerevisiae) [Rattus norvegicus] Length = 1855 Score = 96.9 bits (240), Expect = 1e-18, Method: Composition-based stats. Identities = 33/145 (22%), Positives = 57/145 (39%), Gaps = 26/145 (17%) Query: 69 APIIVAYHFNSDLA-----------------RLQKAFPQGRTLDKDPCTIQEWNEGKIPL 111 I++ S L RL + P G+ + + N+ I + Sbjct: 1651 HRILIFCQLKSMLDIVEHDLLKPHLPSVTYLRLDGSIPPGQ---RHSIVSRFNNDPSIDV 1707 Query: 112 LFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLI 171 L G GLNL G + +VF W+ Q ++R + G KR V VY LI Sbjct: 1708 LLLTTHVGGLGLNLT-GADTVVFVEHDWNPMRDLQAMDR-----AHRIGQKRVVNVYRLI 1761 Query: 172 AQNTIDELVLQRLRTKSTIQDLLLN 196 + T++E ++ + K I + +++ Sbjct: 1762 TRGTLEEKIMGLQKFKMNIANTVIS 1786 >gi|281345313|gb|EFB20897.1| hypothetical protein PANDA_004205 [Ailuropoda melanoleuca] Length = 1845 Score = 96.9 bits (240), Expect = 1e-18, Method: Composition-based stats. Identities = 33/145 (22%), Positives = 57/145 (39%), Gaps = 26/145 (17%) Query: 69 APIIVAYHFNSDLA-----------------RLQKAFPQGRTLDKDPCTIQEWNEGKIPL 111 I++ S L RL + P G+ + + N+ I + Sbjct: 1641 HRILIFCQLKSMLDIVEHDLLKPHLPSVTYLRLDGSIPPGQ---RHSIVSRFNNDPSIDV 1697 Query: 112 LFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLI 171 L G GLNL G + +VF W+ Q ++R + G KR V VY LI Sbjct: 1698 LLLTTHVGGLGLNLT-GADTVVFVEHDWNPMRDLQAMDR-----AHRIGQKRVVNVYRLI 1751 Query: 172 AQNTIDELVLQRLRTKSTIQDLLLN 196 + T++E ++ + K I + +++ Sbjct: 1752 TRGTLEEKIMGLQKFKMNIANTVIS 1776 >gi|215693288|dbj|BAG88670.1| unnamed protein product [Oryza sativa Japonica Group] Length = 607 Score = 96.9 bits (240), Expect = 1e-18, Method: Composition-based stats. Identities = 41/160 (25%), Positives = 65/160 (40%), Gaps = 21/160 (13%) Query: 42 YDEEKHWKEVHDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQ-----KAFPQGRT- 93 D EK+W E KI L +E + + A I+ + + L LQ F R Sbjct: 431 IDVEKNWVE--SSKISFLLQELEVLRTSGAKSIIFSQWTAFLDLLQIPLSRHNFSFARLD 488 Query: 94 ----LDKDPCTIQEWNEGK-IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMI 148 L + I+E++E K I +L + G G+NL N V WW+ +Q I Sbjct: 489 GTLNLQQREKVIKEFSEDKSILVLLMSLKAGGVGINLTAASNAFVM-DPWWNPAVEEQAI 547 Query: 149 ERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKS 188 RI + G ++V + I + T++E + K Sbjct: 548 MRI-----HRIGQTKSVSIKRFIVKGTVEERMEAVQARKQ 582 >gi|149062768|gb|EDM13191.1| similar to TBP-associated factor 172 (TAF-172) (TAF(II)170) (predicted) [Rattus norvegicus] Length = 1372 Score = 96.9 bits (240), Expect = 1e-18, Method: Composition-based stats. Identities = 33/145 (22%), Positives = 57/145 (39%), Gaps = 26/145 (17%) Query: 69 APIIVAYHFNSDLA-----------------RLQKAFPQGRTLDKDPCTIQEWNEGKIPL 111 I++ S L RL + P G+ + + N+ I + Sbjct: 1168 HRILIFCQLKSMLDIVEHDLLKPHLPSVTYLRLDGSIPPGQ---RHSIVSRFNNDPSIDV 1224 Query: 112 LFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLI 171 L G GLNL G + +VF W+ Q ++R + G KR V VY LI Sbjct: 1225 LLLTTHVGGLGLNLT-GADTVVFVEHDWNPMRDLQAMDR-----AHRIGQKRVVNVYRLI 1278 Query: 172 AQNTIDELVLQRLRTKSTIQDLLLN 196 + T++E ++ + K I + +++ Sbjct: 1279 TRGTLEEKIMGLQKFKMNIANTVIS 1303 >gi|73998226|ref|XP_543929.2| PREDICTED: similar to TATA-binding-protein-associated factor 172 (TBP-associated factor 172) (TAF-172) (TAF(II)170) (B-TFIID transcription factor-associated 170 kDa subunit) [Canis familiaris] Length = 1849 Score = 96.9 bits (240), Expect = 1e-18, Method: Composition-based stats. Identities = 33/145 (22%), Positives = 57/145 (39%), Gaps = 26/145 (17%) Query: 69 APIIVAYHFNSDLA-----------------RLQKAFPQGRTLDKDPCTIQEWNEGKIPL 111 I++ S L RL + P G+ + + N+ I + Sbjct: 1645 HRILIFCQLKSMLDIVEHDLLKPHLPSVTYLRLDGSIPPGQ---RHSIVSRFNNDPSIDV 1701 Query: 112 LFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLI 171 L G GLNL G + +VF W+ Q ++R + G KR V VY LI Sbjct: 1702 LLLTTHVGGLGLNLT-GADTVVFVEHDWNPMRDLQAMDR-----AHRIGQKRVVNVYRLI 1755 Query: 172 AQNTIDELVLQRLRTKSTIQDLLLN 196 + T++E ++ + K I + +++ Sbjct: 1756 TRGTLEEKIMGLQKFKMNIANTVIS 1780 >gi|83286649|ref|XP_730253.1| hypothetical protein [Plasmodium yoelii yoelii str. 17XNL] gi|23489925|gb|EAA21818.1| SNF2 family N-terminal domain, putative [Plasmodium yoelii yoelii] Length = 1350 Score = 96.9 bits (240), Expect = 1e-18, Method: Composition-based stats. Identities = 43/221 (19%), Positives = 90/221 (40%), Gaps = 37/221 (16%) Query: 6 KFQRELYCDLQGENIEAFNSAS-----KTVKCLQL---ANGAVYYD--------EEKHWK 49 K Q++LY D+ +NI+ N+ + +QL N +D E H Sbjct: 485 KLQKKLYSDILSKNIDVINAMTGSKNQMLNILMQLRKCCNHPYLFDGIEEPPYIEGNHLI 544 Query: 50 EVHDEKIKALEVIIEKANA--APIIVAYHFNSDLARL---------QKAFPQGRTLDKDP 98 E K+ L+ ++ + + +++ L + + G T+ + Sbjct: 545 E-TSGKMSLLDKLLPRLKKENSRVLLFSQMTRLLDIIDDYCRWKKYEYLRIDGSTVGDER 603 Query: 99 CT-IQEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTR 155 I ++NE K + + G G+NL +I++ F ++ + Q ++R Sbjct: 604 QIRINKFNEPNSKYFIFLLSTRAGGIGINLTT-ADIVILFDSDYNPQMDIQAMDR----- 657 Query: 156 QRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + G K+ V VY + QN+++E +++R K + L++ Sbjct: 658 AHRIGQKKRVIVYRFVTQNSVEEKIVERAAKKLKLDSLIIQ 698 >gi|225681829|gb|EEH20113.1| DNA repair and recombination protein RAD26 [Paracoccidioides brasiliensis Pb03] Length = 1000 Score = 96.9 bits (240), Expect = 1e-18, Method: Composition-based stats. Identities = 31/156 (19%), Positives = 58/156 (37%), Gaps = 19/156 (12%) Query: 54 EKIKALEVIIEKANAAPIIVAYHFNSDLARLQK----------AFPQGRTLDKDPCTIQE 103 + L I + +++ ++ S L L K K + + Sbjct: 670 RVLDQLLHNIRHTTSEKVVLISNYTSTLDLLGKLLTSLSLPFLRLDGSTPAAKRQALVDD 729 Query: 104 WNEGK---IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 +N + + G GLNL G + LV F + W+ Q + RI + G Sbjct: 730 FNRSSPTSVFAFLLSAKAGGTGLNL-IGASRLVLFDVDWNPATDMQAMARI-----HRDG 783 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 KR +Y + + ++E + QR TK + D +++ Sbjct: 784 QKRHCRIYRFLLKGALEEKIWQRQVTKIGLADSVMD 819 >gi|121701385|ref|XP_001268957.1| SNF2 family helicase/ATPase PasG, putative [Aspergillus clavatus NRRL 1] gi|119397100|gb|EAW07531.1| SNF2 family helicase/ATPase PasG, putative [Aspergillus clavatus NRRL 1] Length = 892 Score = 96.9 bits (240), Expect = 1e-18, Method: Composition-based stats. Identities = 30/168 (17%), Positives = 61/168 (36%), Gaps = 20/168 (11%) Query: 46 KHWKEVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQK----------AFPQGRT 93 K+ L+ ++ I++ F + L LQ G Sbjct: 642 DETLVTASGKMLLLDRLVPCLLKKGHKILIFSQFKTQLDILQDWATQLRGWNCCRIDGAI 701 Query: 94 LDKDPCT-IQEWNEGK-IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERI 151 D I+ +N + + G G+NL + ++ F W+ ++ Q Sbjct: 702 SQTDRQAQIKAFNSDSHFKIFLLSTRAGGQGINL-VAADTVILFDSDWNPQQDLQA---- 756 Query: 152 GVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 R + G R V VY L + T+++ +L++ +K ++ L++ K Sbjct: 757 -QDRAHRIGQTRPVIVYRLATKGTVEQTLLEKADSKRRLERLVIQKGK 803 >gi|321445102|gb|EFX60594.1| hypothetical protein DAPPUDRAFT_308061 [Daphnia pulex] Length = 190 Score = 96.9 bits (240), Expect = 1e-18, Method: Composition-based stats. Identities = 30/147 (20%), Positives = 60/147 (40%), Gaps = 18/147 (12%) Query: 66 ANAAPIIVAYHFNSDLARLQKAFPQGRT----------LDKDPCTIQEWNE--GKIPLLF 113 + +V + S L + F + R + ++++N P++ Sbjct: 17 SQNQKAVVVSQWTSMLDLFAQHFRRMRIRCHLIAGSVAIKHRTEIVEDFNGNPDGAPVIL 76 Query: 114 AHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQ 173 + G GLNL GGN + + W+ + Q +R+ + G + V V+ +I Q Sbjct: 77 LSLGAGGVGLNL-IGGNHIFIADMHWNPQLEAQACDRV-----YRVGQTKDVHVHRMITQ 130 Query: 174 NTIDELVLQRLRTKSTIQDLLLNALKK 200 T++E +LQ + K + + +L K Sbjct: 131 GTVEERILQLQQEKLAMANGILTGAAK 157 >gi|307191525|gb|EFN75028.1| Chromatin-remodeling complex ATPase chain Iswi [Camponotus floridanus] Length = 1010 Score = 96.9 bits (240), Expect = 1e-18, Method: Composition-based stats. Identities = 46/230 (20%), Positives = 90/230 (39%), Gaps = 40/230 (17%) Query: 1 MKQY---HKFQRELYCDLQGENIEAFNSASKTVK------CLQL---ANGAVYYD--EEK 46 +K Y K QRE Y + ++I+ N A K K +QL N +D E Sbjct: 362 IKVYIGLSKMQREWYTKVLMKDIDIVNGAGKIEKMRLQNILMQLRKCCNHPYLFDGAEPG 421 Query: 47 HWKEVHDE------KIKALEVIIEKAN--AAPIIVAYHFNSDLARL---------QKAFP 89 + K+ L+ ++ K + +++ L L Q Sbjct: 422 PPYTTDEHLVYNCGKMVILDKLLPKLQQQESRVLIFSQMTRMLDILEDYCHWRCFQYCRL 481 Query: 90 QGRTLDKDPC-TIQEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 G T +D I E+N + + + G G+NL ++++ + W+ + Q Sbjct: 482 DGNTAHEDRQRQINEYNAPGSEKFIFMLSTRAGGLGINL-ATADVVIIYDSDWNPQMDLQ 540 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 ++R + G ++ V V+ I +NT++E +++R K + L++ Sbjct: 541 AMDR-----AHRIGQQKQVRVFRFITENTVEEKIVERAEVKLRLDKLVIQ 585 >gi|301761472|ref|XP_002916159.1| PREDICTED: TATA-binding protein-associated factor 172-like [Ailuropoda melanoleuca] Length = 1865 Score = 96.9 bits (240), Expect = 1e-18, Method: Composition-based stats. Identities = 33/145 (22%), Positives = 57/145 (39%), Gaps = 26/145 (17%) Query: 69 APIIVAYHFNSDLA-----------------RLQKAFPQGRTLDKDPCTIQEWNEGKIPL 111 I++ S L RL + P G+ + + N+ I + Sbjct: 1661 HRILIFCQLKSMLDIVEHDLLKPHLPSVTYLRLDGSIPPGQ---RHSIVSRFNNDPSIDV 1717 Query: 112 LFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLI 171 L G GLNL G + +VF W+ Q ++R + G KR V VY LI Sbjct: 1718 LLLTTHVGGLGLNLT-GADTVVFVEHDWNPMRDLQAMDR-----AHRIGQKRVVNVYRLI 1771 Query: 172 AQNTIDELVLQRLRTKSTIQDLLLN 196 + T++E ++ + K I + +++ Sbjct: 1772 TRGTLEEKIMGLQKFKMNIANTVIS 1796 >gi|239606660|gb|EEQ83647.1| chromatin remodeling complex subunit [Ajellomyces dermatitidis ER-3] Length = 1542 Score = 96.9 bits (240), Expect = 1e-18, Method: Composition-based stats. Identities = 26/164 (15%), Positives = 63/164 (38%), Gaps = 20/164 (12%) Query: 52 HDEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQKAFPQGRTLDKD----------PC 99 K++ LE+++ K +++ F +L ++ L + Sbjct: 1006 ASSKLQLLEMLLPKLQERGHRVLIFSQFLDNLDVVEDFLDGLGLLHRRLDGSMSSLQKQK 1065 Query: 100 TIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 I ++N P S G G+NL + ++ ++ + Q + R Sbjct: 1066 QIDDFNAPDSPYFAFLLSTRSGGVGINL-ATADTVIIMDPDFNPHQDIQALSR-----AH 1119 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 + G ++ V V+ L+ + + +E ++Q + K + +L+ + E Sbjct: 1120 RIGQRKKVLVFQLVTKGSAEEKIMQIGKKKMALDQVLIEHMDAE 1163 >gi|195339573|ref|XP_002036392.1| GM12170 [Drosophila sechellia] gi|194130272|gb|EDW52315.1| GM12170 [Drosophila sechellia] Length = 611 Score = 96.9 bits (240), Expect = 1e-18, Method: Composition-based stats. Identities = 29/164 (17%), Positives = 64/164 (39%), Gaps = 19/164 (11%) Query: 52 HDEKIKALEVIIEKA--NAAPIIVAYHFNSDLA------RLQK----AFPQGRTLDKDPC 99 K + L+ ++ K +++ F L R++K ++ Sbjct: 417 DSGKFRYLDTLLPKLKEEGHRVLLFSQFTMMLDIVEEYLRIRKFGFCRLDGATAVNVRQD 476 Query: 100 TIQEWNEGK-IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQ 158 I ++N I + + G G+NL ++ + ++ +Q +R + Sbjct: 477 LITDFNGDDSIFVFLLSTKAGGVGINLTAADTCVIH-DIDFNPYNDKQAEDRC-----HR 530 Query: 159 AGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKET 202 G +R V +Y LI+++TI+E +L K ++ + + K E Sbjct: 531 MGQQRPVTIYRLISESTIEEGILMAAEEKLKLEKDITSNEKGEV 574 >gi|134081405|emb|CAK46446.1| unnamed protein product [Aspergillus niger] Length = 1223 Score = 96.9 bits (240), Expect = 1e-18, Method: Composition-based stats. Identities = 33/186 (17%), Positives = 67/186 (36%), Gaps = 21/186 (11%) Query: 35 LANGAVYYDEEKHWKEVHDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQK------ 86 L N + + K++ ++ ++E K ++ L L+K Sbjct: 748 LQNHKLMSSTTGYGSGSKSGKMQVVKSLLELWKDTGHKTLLFTQHRIMLDILEKFVNSLS 807 Query: 87 -----AFPQGRTLDKDPCTIQEWNE-GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWD 140 + + E+N + + G G+NL G + ++ + W+ Sbjct: 808 GFSYRRMDGTTPIQHRQAMVDEFNNDPSLHVFLLTTKVGGLGVNLT-GADRVIIYDPDWN 866 Query: 141 LEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL-NALK 199 Q ER + G KR V VY L+ TI+E + R K + + +L + + Sbjct: 867 PSTDVQARERAW-----RLGQKRDVTVYRLMTAGTIEEKIYHRQIFKQFLTNKILRDPKQ 921 Query: 200 KETIHV 205 ++T + Sbjct: 922 RQTFQL 927 >gi|328773251|gb|EGF83288.1| hypothetical protein BATDEDRAFT_84829 [Batrachochytrium dendrobatidis JAM81] Length = 825 Score = 96.9 bits (240), Expect = 1e-18, Method: Composition-based stats. Identities = 31/146 (21%), Positives = 61/146 (41%), Gaps = 17/146 (11%) Query: 53 DEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQG-----------RTLDKDPCTI 101 DE ++ L + +N + IV F S L +Q A + + +++ Sbjct: 656 DEVVRILAENQKNSNVSKTIVFSQFTSMLNVIQNALDETDILYCRYDGGMKRKEREQTLF 715 Query: 102 QEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGF 161 + KI ++ G+NL N ++ WW+ +Q I R+ + G Sbjct: 716 HFKSSEKINVMLISTKCGAAGINLTC-ANFVILVDPWWNPMMEEQAIGRV-----HRIGQ 769 Query: 162 KRAVFVYYLIAQNTIDELVLQRLRTK 187 + V V L+ ++TI+E V+++ + K Sbjct: 770 RNPVHVVRLVMKDTIEEKVMEKQKQK 795 >gi|322695761|gb|EFY87564.1| DNA repair and recombination protein RAD5B [Metarhizium acridum CQMa 102] Length = 1030 Score = 96.9 bits (240), Expect = 1e-18, Method: Composition-based stats. Identities = 30/171 (17%), Positives = 62/171 (36%), Gaps = 20/171 (11%) Query: 49 KEVHDEKIKALEVIIEKA---NAAPIIVAYHFNSDLARLQKAFPQGRTL----------- 94 K +A+ I++ + + +++ + S L +Q Sbjct: 853 ITTQSSKTEAMMQILQATLNKHGSKVVIFSQWTSFLNIVQNQLDGAGIKYSRIDGSMNTE 912 Query: 95 DKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 +D N+ + ++ A A C GLNL + ++ WW Q I+R+ Sbjct: 913 KRDRAVQALDNDAETRVMLASLAVCSVGLNL-VSADTVILSDSWWAPAIEDQAIDRV--- 968 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIHV 205 + G R V+ LI + +++E VL + K + +++ H Sbjct: 969 --HRLGQTRKTTVWRLIVEGSVEERVLDIQKEKRDLVTKAFQEKERKGKHT 1017 >gi|190348672|gb|EDK41171.2| hypothetical protein PGUG_05269 [Meyerozyma guilliermondii ATCC 6260] Length = 593 Score = 96.9 bits (240), Expect = 1e-18, Method: Composition-based stats. Identities = 46/227 (20%), Positives = 86/227 (37%), Gaps = 35/227 (15%) Query: 2 KQYHKFQRELYC-----DLQGENIEAFNSASKTVKCLQLANG-AVYYDEEKHWKEVHDE- 54 K Y + + D G+ I N+ ++ ++ ++ N VY + E D Sbjct: 244 KLYQQMLKYNLLFSSNPDGDGKPIAIKNTNNQIMQLRKICNHPFVYEEVENMINPTADTN 303 Query: 55 --------KIKALEVIIEK--ANAAPIIVAYHFNSD---------LARLQKAFPQGRTL- 94 K + L+ I+ K A +++ + S L L+ G T Sbjct: 304 DEIWRVAGKFELLDRILPKLKATGHRVLIFFQMTSIMNIMEDFLRLRDLKYMRLDGATKA 363 Query: 95 DKDPCTIQEWNE--GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIG 152 D ++ +NE + G GLNLQ + ++ F W+ + Q Sbjct: 364 DDRTGLLKLFNEENSDYFCFLLSTRAGGLGLNLQT-ADTVIIFDSDWNPHQDLQA----- 417 Query: 153 VTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 R + G K V + LI +++++E++L+R K I ++ A K Sbjct: 418 QDRAHRIGQKNEVRIIRLITEDSVEEMILERAHAKLEIDGKVIQAGK 464 >gi|302845062|ref|XP_002954070.1| hypothetical protein VOLCADRAFT_40456 [Volvox carteri f. nagariensis] gi|300260569|gb|EFJ44787.1| hypothetical protein VOLCADRAFT_40456 [Volvox carteri f. nagariensis] Length = 520 Score = 96.9 bits (240), Expect = 1e-18, Method: Composition-based stats. Identities = 34/149 (22%), Positives = 63/149 (42%), Gaps = 19/149 (12%) Query: 58 ALEVIIEKANAAPIIVAYHFNSDLARLQK----------AFPQGRTLDKDPCTIQEWNEG 107 L V+ + + ++V ++ S L + T++K ++ +N+ Sbjct: 379 MLHVLYTETHDRIVLV-SNYTSSLDLFAQLCRERGYPFVRLDGTTTINKRQKLVKVFNDP 437 Query: 108 --KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 + + G GLNL G N LV F W+ QQ R+ + G ++ V Sbjct: 438 AERQFAFLLSSKAGGCGLNL-IGANRLVLFDPDWNPANDQQAAARVW-----RDGQRKRV 491 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 FVY ++ +I+E V QR +K ++ L+ Sbjct: 492 FVYRFLSTGSIEEKVYQRQLSKEGLKQLV 520 >gi|209875245|ref|XP_002139065.1| SNF2 family N-terminal domain-containing protein [Cryptosporidium muris RN66] gi|209554671|gb|EEA04716.1| SNF2 family N-terminal domain-containing protein [Cryptosporidium muris RN66] Length = 1085 Score = 96.9 bits (240), Expect = 1e-18, Method: Composition-based stats. Identities = 44/203 (21%), Positives = 72/203 (35%), Gaps = 35/203 (17%) Query: 16 QGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIE---KANAAPII 72 + E S+ K +Q++N H K K L I++ + ++ Sbjct: 638 DEDEDENEYSSELYFKKIQISN----------VNPSHSGKYKTLLSILKLWREKKKNRVL 687 Query: 73 VAYHFNSDLARLQKAF---------PQGRTLDKDPCTIQEW-------NEGKIPLLFAHP 116 + L L K TLD + + N+ I L Sbjct: 688 IFTQGVRILNLLVKMLQRDLNLILDKDILTLDGSTPVVSRFSLVERFNNDSSIFLFILTS 747 Query: 117 ASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTI 176 G GLN+ G N ++ + WW+ Q ER + G + V VY LI ++T+ Sbjct: 748 RVGGVGLNI-MGANRIILYDPWWNPMTDAQAKERCW-----RIGQDKEVIVYRLITKDTV 801 Query: 177 DELVLQRLRTKSTIQDLLLNALK 199 +E + QR K I + +L K Sbjct: 802 EEKIYQRQLFKQFIANQILQDAK 824 >gi|328856433|gb|EGG05554.1| hypothetical protein MELLADRAFT_87820 [Melampsora larici-populina 98AG31] Length = 593 Score = 96.9 bits (240), Expect = 1e-18, Method: Composition-based stats. Identities = 44/178 (24%), Positives = 69/178 (38%), Gaps = 28/178 (15%) Query: 48 WKEVHDEKIK----ALEV---IIEKANAAPIIVAYHFNSDLARLQKA---------FPQG 91 W +D K+ AL I+ II+ +F S L ++ G Sbjct: 260 WVTRNDIKLSGKMIALASFLKILHAKTDEKIILVSNFTSTLDVIEAHCRSQNYSLCRLDG 319 Query: 92 RTLDKDPCTI-QEWN---EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQM 147 +T I Q +N + S G GLNL G + L+ F W+ Q Sbjct: 320 KTPQTKRDDIVQTFNRMTARSQFVFLLSSKSGGVGLNL-IGASRLILFDSDWNPATDLQA 378 Query: 148 IERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN--ALKKETI 203 + RI + G K+A +Y +A TIDE + QR TK+ + L+ + +E + Sbjct: 379 MARIW-----RQGQKKACHIYRFLATGTIDECIFQRQVTKTGLATDLIKDAGVSREVL 431 >gi|316974135|gb|EFV57661.1| chromatin-remodeling complex ATPase chain Iswi [Trichinella spiralis] Length = 1075 Score = 96.9 bits (240), Expect = 1e-18, Method: Composition-based stats. Identities = 38/217 (17%), Positives = 84/217 (38%), Gaps = 37/217 (17%) Query: 11 LYCDLQGENIEAFNSASKTVK------CLQL---ANGAVYYD--EEKHWKEVHDEKIKAL 59 +Y + ++I+ N A K K +QL N +D E + Sbjct: 432 MYTKILMKDIDIVNGAGKLEKARLLNILMQLRKCCNHPYLFDGAEPGPPFTTDQHLVDNC 491 Query: 60 --EVIIEKA------NAAPIIVAYHFNSDLARLQ---------KAFPQGRTLDKDPCT-I 101 V+++K + +++ + L L+ G+T ++ I Sbjct: 492 GKMVLVDKLLPKLKEQGSRVLIFSQMSRMLDILEDYCLWKQYPYCRLDGQTPHQERQASI 551 Query: 102 QEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQA 159 +N + + + G G+NL +I++ + W+ + Q ++R + Sbjct: 552 DAFNAPNSEKFIFMLTTRAGGLGINL-ATADIVILYDSDWNPQMDLQAMDR-----AHRI 605 Query: 160 GFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 G K+ V V+ LI +NT++E +++R K + +++ Sbjct: 606 GQKKTVRVFRLITENTVEERIVERAEIKLRLDTVVIQ 642 >gi|119391227|dbj|BAF41982.1| TBP-associated factor 170 [Mus musculus] Length = 1848 Score = 96.9 bits (240), Expect = 1e-18, Method: Composition-based stats. Identities = 33/145 (22%), Positives = 57/145 (39%), Gaps = 26/145 (17%) Query: 69 APIIVAYHFNSDLA-----------------RLQKAFPQGRTLDKDPCTIQEWNEGKIPL 111 I++ S L RL + P G+ + + N+ I + Sbjct: 1644 HRILIFCQLKSMLDIVEHDLLKPHLPSVTYLRLDGSIPPGQ---RHSIVSRFNNDPSIDV 1700 Query: 112 LFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLI 171 L G GLNL G + +VF W+ Q ++R + G KR V VY LI Sbjct: 1701 LLLTTHVGGLGLNLT-GADTVVFVEHDWNPMRDLQAMDR-----AHRIGQKRVVNVYRLI 1754 Query: 172 AQNTIDELVLQRLRTKSTIQDLLLN 196 + T++E ++ + K I + +++ Sbjct: 1755 TRGTLEEKIMGLQKFKMNIANTVIS 1779 >gi|123858774|ref|NP_001074175.1| TATA-binding protein-associated factor 172 [Mus musculus] Length = 1848 Score = 96.9 bits (240), Expect = 1e-18, Method: Composition-based stats. Identities = 33/145 (22%), Positives = 57/145 (39%), Gaps = 26/145 (17%) Query: 69 APIIVAYHFNSDLA-----------------RLQKAFPQGRTLDKDPCTIQEWNEGKIPL 111 I++ S L RL + P G+ + + N+ I + Sbjct: 1644 HRILIFCQLKSMLDIVEHDLLKPHLPSVTYLRLDGSIPPGQ---RHSIVSRFNNDPSIDV 1700 Query: 112 LFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLI 171 L G GLNL G + +VF W+ Q ++R + G KR V VY LI Sbjct: 1701 LLLTTHVGGLGLNLT-GADTVVFVEHDWNPMRDLQAMDR-----AHRIGQKRVVNVYRLI 1754 Query: 172 AQNTIDELVLQRLRTKSTIQDLLLN 196 + T++E ++ + K I + +++ Sbjct: 1755 TRGTLEEKIMGLQKFKMNIANTVIS 1779 >gi|281212152|gb|EFA86312.1| hypothetical protein PPL_00102 [Polysphondylium pallidum PN500] Length = 2033 Score = 96.9 bits (240), Expect = 1e-18, Method: Composition-based stats. Identities = 31/157 (19%), Positives = 62/157 (39%), Gaps = 20/157 (12%) Query: 55 KIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAF---------PQGRTL-DKDPCTIQ 102 K L+ I+ K A+ +++ + L++ F G T D+ + Sbjct: 1343 KFDLLDKILPKLKASGHRVLIFSQMTHLIDILEQFFYYKGYKYLRLDGSTKSDERGPLLN 1402 Query: 103 EWN--EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 +N + + + G GLNLQ + ++ F W+ + Q R + G Sbjct: 1403 LFNAENSEYFIFVLSTRAGGLGLNLQT-ADTVIIFDSDWNPQMDLQA-----QDRAHRIG 1456 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 K+ V V L+ N+++E ++ R K + ++ A Sbjct: 1457 QKQTVKVLRLVTANSVEERIIARANFKKELDRKIIQA 1493 >gi|255715511|ref|XP_002554037.1| KLTH0E12870p [Lachancea thermotolerans] gi|238935419|emb|CAR23600.1| KLTH0E12870p [Lachancea thermotolerans] Length = 1880 Score = 96.9 bits (240), Expect = 1e-18, Method: Composition-based stats. Identities = 37/181 (20%), Positives = 69/181 (38%), Gaps = 27/181 (14%) Query: 30 VKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQ---- 85 +K L L G D +K K + + E +I + ++ L ++ Sbjct: 1632 LKNLLLECGIGIQDVDKKSKTY----LPSTESVISQ---HRALIFCQLKDMLDMVENDLF 1684 Query: 86 --------KAFPQGRTLDKDPC-TIQEWNE-GKIPLLFAHPASCGHGLNLQYGGNILVFF 135 G +D ++++NE I L G GLNL G + ++F Sbjct: 1685 KKYMPSVTYMRLDGSVESRDRQAVVRKFNEDPSIDCLLLTTKVGGLGLNLT-GADTVIFI 1743 Query: 136 SLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 W+ Q ++R + G K+ V VY +I + T++E ++ + K I ++ Sbjct: 1744 EHDWNPMNDLQAMDR-----AHRLGQKKVVNVYRIITRGTLEEKIMGLQKFKMNIASTVI 1798 Query: 196 N 196 N Sbjct: 1799 N 1799 >gi|260945000|ref|XP_002616798.1| hypothetical protein CLUG_04039 [Clavispora lusitaniae ATCC 42720] gi|238850447|gb|EEQ39911.1| hypothetical protein CLUG_04039 [Clavispora lusitaniae ATCC 42720] Length = 1259 Score = 96.9 bits (240), Expect = 1e-18, Method: Composition-based stats. Identities = 29/174 (16%), Positives = 66/174 (37%), Gaps = 20/174 (11%) Query: 37 NGAVYYDEEKHWKEVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARL---------- 84 G+ D + K+ LE ++ + +++ L L Sbjct: 502 GGSTSRDNVLKGLVMSSGKMVLLEQLLTRLKKEGHRVLIFSQMVRILDILGDYLSIKGYQ 561 Query: 85 QKAFPQGRTLDKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLE 142 + G + +I +N + + G G+NL + ++ F W+ + Sbjct: 562 FQRLDGGVPSAQRKISIDHFNSPDSKDFVFLLSTRAGGLGINLMT-ADTVIIFDSDWNPQ 620 Query: 143 EHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 Q + R + G K+ V VY ++++T++E +L+R R K ++ +++ Sbjct: 621 ADLQAMAR-----AHRIGQKKHVSVYRFVSKDTVEEEILERARKKMILEYAIIS 669 >gi|224008985|ref|XP_002293451.1| predicted protein [Thalassiosira pseudonana CCMP1335] gi|220970851|gb|EED89187.1| predicted protein [Thalassiosira pseudonana CCMP1335] Length = 543 Score = 96.9 bits (240), Expect = 1e-18, Method: Composition-based stats. Identities = 35/173 (20%), Positives = 63/173 (36%), Gaps = 23/173 (13%) Query: 39 AVYYDEEKHWKEVHDEKIKALEVIIEKA-----NAAPIIVAYHFNSDLARLQK------- 86 A+ D K+ L ++ + I++ ++ L + + Sbjct: 340 AIRGDRNAPVMPELSGKMFVLFRLMREMRRPGNGNDKIVIVSNYTQTLDLIGRMCRENNW 399 Query: 87 ---AFPQGRTLDKDPCTIQEWNEGKIPL--LFAHPASCGHGLNLQYGGNILVFFSLWWDL 141 ++ K E+N+ L + G GLNL GGN LV F W+ Sbjct: 400 GFCRLDGSISMKKRQKMCDEFNDPSSSLVAFLLSSKAGGCGLNL-IGGNRLVLFDPDWNP 458 Query: 142 EEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 +Q R + G K+ F Y +A T++E + QR +K +Q ++ Sbjct: 459 AVDKQAAARCW-----RDGQKKRCFTYRFLATGTVEEKIFQRQLSKEGLQSVV 506 >gi|260811612|ref|XP_002600516.1| hypothetical protein BRAFLDRAFT_205490 [Branchiostoma floridae] gi|229285803|gb|EEN56528.1| hypothetical protein BRAFLDRAFT_205490 [Branchiostoma floridae] Length = 606 Score = 96.9 bits (240), Expect = 1e-18, Method: Composition-based stats. Identities = 31/151 (20%), Positives = 61/151 (40%), Gaps = 19/151 (12%) Query: 55 KIKALEVIIEKANA--APIIVAYHFNSDLARLQKAF---------PQGRTLDKDP-CTIQ 102 K++ L+ +++ N ++V + L +++ G T D ++ Sbjct: 398 KMQVLQQLLDVFNKQRRKVLVFSFYTKLLDIIEQYLMSTGEVYSRLDGTTRTSDRLRIVK 457 Query: 103 EWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGF 161 ++N I L + G GLN G ++++ F W+ QQ R + G Sbjct: 458 DFNTNPNILLCLVSTTAGGLGLNFT-GASVVILFEPTWNPANDQQA-----QDRAYRIGQ 511 Query: 162 KRAVFVYYLIAQNTIDELVLQRLRTKSTIQD 192 ++ V VY L+ TI+E + R K + + Sbjct: 512 RQDVRVYRLVTMGTIEENMYLRQVYKQQLSE 542 >gi|148709831|gb|EDL41777.1| mCG13925 [Mus musculus] Length = 1372 Score = 96.9 bits (240), Expect = 1e-18, Method: Composition-based stats. Identities = 33/145 (22%), Positives = 57/145 (39%), Gaps = 26/145 (17%) Query: 69 APIIVAYHFNSDLA-----------------RLQKAFPQGRTLDKDPCTIQEWNEGKIPL 111 I++ S L RL + P G+ + + N+ I + Sbjct: 1168 HRILIFCQLKSMLDIVEHDLLKPHLPSVTYLRLDGSIPPGQ---RHSIVSRFNNDPSIDV 1224 Query: 112 LFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLI 171 L G GLNL G + +VF W+ Q ++R + G KR V VY LI Sbjct: 1225 LLLTTHVGGLGLNLT-GADTVVFVEHDWNPMRDLQAMDR-----AHRIGQKRVVNVYRLI 1278 Query: 172 AQNTIDELVLQRLRTKSTIQDLLLN 196 + T++E ++ + K I + +++ Sbjct: 1279 TRGTLEEKIMGLQKFKMNIANTVIS 1303 >gi|159490586|ref|XP_001703254.1| chromodomain-helicase-DNA-binding protein [Chlamydomonas reinhardtii] gi|158280178|gb|EDP05936.1| chromodomain-helicase-DNA-binding protein [Chlamydomonas reinhardtii] Length = 1219 Score = 96.9 bits (240), Expect = 1e-18, Method: Composition-based stats. Identities = 27/146 (18%), Positives = 55/146 (37%), Gaps = 20/146 (13%) Query: 66 ANAAPIIVAYH------FNSDLARLQKAFPQGRTLDKDPCT-----IQEWNEGKIP--LL 112 A +++ SD RL+ FP R P ++ +N P Sbjct: 559 ATGHRVLIFSQMVRVLDIISDYMRLRG-FPHQRLDGSTPAAARHAAMEHFNRPDSPDFAF 617 Query: 113 FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIA 172 + G G+NL + ++ F W+ + Q + R + G V +Y + Sbjct: 618 LLSTRAGGLGINL-ATADTVIIFDSDWNPQNDLQAMSR-----AHRIGQTETVNIYRFVT 671 Query: 173 QNTIDELVLQRLRTKSTIQDLLLNAL 198 +++E +L+R + K + L++ + Sbjct: 672 SGSVEEDILERAKRKMVLDHLVIQRM 697 >gi|320170047|gb|EFW46946.1| helicase [Capsaspora owczarzaki ATCC 30864] Length = 1078 Score = 96.9 bits (240), Expect = 1e-18, Method: Composition-based stats. Identities = 38/219 (17%), Positives = 84/219 (38%), Gaps = 36/219 (16%) Query: 8 QRELYCDLQGENIEAFNSAS-----KTVKCLQL---ANGAVYYD--EEKHWKEVHDEKIK 57 QRE+Y + ++++ NS + + +QL N +D E + Sbjct: 418 QREVYQGILLKDLDVVNSGNANKVRLSNILMQLRKCCNHPYLFDGTEPGPPYTTDKHLLD 477 Query: 58 AL--EVIIE------KANAAPIIVAYHFNSDLARLQ---------KAFPQGRTLDKDPC- 99 A +++ +A + +++ L L+ G+T +D Sbjct: 478 ACGKMSVLDKLLPKLQAQGSRVLIFSQMTRMLDILEDYCMWRGHTYCRLDGQTDHEDRAR 537 Query: 100 TIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 I E+N L + G G+NL Y + ++ + W+ + Q R Sbjct: 538 MIDEYNAPNSSKFLFLLSTRAGGLGINL-YTADTVILYDSDWNPQMDLQA-----QDRAH 591 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + G K+ V ++ + +NT++E +++R K + +++ Sbjct: 592 RIGQKKQVRIFRFVTENTVEERIIERAEMKLRLDAMVIQ 630 >gi|328780249|ref|XP_396786.4| PREDICTED: hypothetical protein LOC413341 [Apis mellifera] Length = 2846 Score = 96.9 bits (240), Expect = 1e-18, Method: Composition-based stats. Identities = 30/156 (19%), Positives = 64/156 (41%), Gaps = 19/156 (12%) Query: 55 KIKALEVIIEK--ANAAPIIVAYHFNSDLARLQK----------AFPQGRTLDKDPCTIQ 102 K+++L ++ K + +++ L L+ +D+ ++ Sbjct: 1691 KLQSLHQLLRKLKSENHRVLIFTQMTRMLDVLEAFLNFHGHIYLRLDGTTKVDQRQVLME 1750 Query: 103 EWNEGK-IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGF 161 +N K I S G G+NL G + ++F+ W+ Q +R + G Sbjct: 1751 RFNGDKRIFCFILSTRSGGVGVNLT-GADTVIFYDSDWNPTMDAQAQDRC-----HRIGQ 1804 Query: 162 KRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 R V +Y L+++ T++E +L++ K + DL + Sbjct: 1805 TRDVHIYRLVSEKTVEENILKKANQKRLLGDLAIEG 1840 >gi|223997284|ref|XP_002288315.1| predicted protein [Thalassiosira pseudonana CCMP1335] gi|220975423|gb|EED93751.1| predicted protein [Thalassiosira pseudonana CCMP1335] Length = 692 Score = 96.9 bits (240), Expect = 1e-18, Method: Composition-based stats. Identities = 38/223 (17%), Positives = 84/223 (37%), Gaps = 38/223 (17%) Query: 6 KFQRELYCDLQGENIEAFNS-------ASKTVKCLQL--ANGAVYYDEEKHWKEVHD--- 53 K Q++LY L +IEA + +QL Y E + + Sbjct: 267 KMQKQLYKKLLLRDIEAITGKNTSSGKTAILNIVMQLRKCCNHPYLFEGVEDRTLDPLGE 326 Query: 54 ------EKIKALEVIIEKAN--AAPIIVAYHFNSDLARL---------QKAFPQGRT-LD 95 K+ ++ ++++ + +++ L L + G T + Sbjct: 327 HLVENCGKLNMVDKLLKRLKERGSRVLIFTQMTRILDILEDYMVMRGYKYCRIDGNTDYE 386 Query: 96 KDPCTIQEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGV 153 I E+N + + G G+NLQ + + + W+ + Q +R Sbjct: 387 DRERGIDEFNAPNSEKFCFILSTRAGGLGINLQT-ADTCILYDSDWNPQADLQAQDRC-- 443 Query: 154 TRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + G K+ V +Y L+++NT++E +++R + K + +++ Sbjct: 444 ---HRLGQKKPVSIYRLVSENTVEEKIVERAQQKLKLDAMVVQ 483 >gi|212536498|ref|XP_002148405.1| DNA repair protein Rhp26/Rad26, putative [Penicillium marneffei ATCC 18224] gi|210070804|gb|EEA24894.1| DNA repair protein Rhp26/Rad26, putative [Penicillium marneffei ATCC 18224] Length = 1157 Score = 96.9 bits (240), Expect = 1e-18, Method: Composition-based stats. Identities = 32/181 (17%), Positives = 65/181 (35%), Gaps = 20/181 (11%) Query: 35 LANGAVYYDEEKHWKEVHDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQK------ 86 L ++ + + K+K ++ ++E + ++ L L+K Sbjct: 691 LVTHKLFSATTGYGEPSKSGKMKVVKALLELWRDTGHKTLLFAQHRIMLNILEKFVNTLS 750 Query: 87 -----AFPQGRTLDKDPCTIQEWNE-GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWD 140 + + + E+N I + G G+NL G + ++ + W+ Sbjct: 751 GFNYRRMDGETPIHRRQLLVDEFNNSPDIHVFLLTTKVGGLGVNLT-GADRVIIYDPDWN 809 Query: 141 LEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKK 200 Q ER + G KR V +Y L+ TI+E + R K + + +L K+ Sbjct: 810 PSTDMQARERAW-----RLGQKREVAIYRLMTAGTIEEKIYHRQIFKQFLTNKVLKDPKQ 864 Query: 201 E 201 Sbjct: 865 R 865 >gi|242220532|ref|XP_002476031.1| predicted protein [Postia placenta Mad-698-R] gi|220724754|gb|EED78776.1| predicted protein [Postia placenta Mad-698-R] Length = 808 Score = 96.9 bits (240), Expect = 1e-18, Method: Composition-based stats. Identities = 31/153 (20%), Positives = 64/153 (41%), Gaps = 19/153 (12%) Query: 55 KIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQ----------GRTLDKDPCTIQ 102 K+K L ++E+ A +++ F L LQK + +D + Sbjct: 631 KVKVLLQLLERYHAEGRRVLIFSQFTQILDILQKVLEKEGIRFSLLTGATPVDARQSLVD 690 Query: 103 EWNEGK-IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGF 161 E+ + + I + + G G+NL ++++ F ++ +Q R + G Sbjct: 691 EFTDDESISVFLLSTKAGGMGINLT-AASVVIMFDQDFNPHNDKQA-----QDRAYRIGQ 744 Query: 162 KRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 K+ V V LI + +I+E +L +TK + + + Sbjct: 745 KQNVDVVKLITKGSIEEDMLALGQTKLALDEAV 777 >gi|225438089|ref|XP_002272543.1| PREDICTED: hypothetical protein [Vitis vinifera] Length = 1227 Score = 96.9 bits (240), Expect = 1e-18, Method: Composition-based stats. Identities = 31/142 (21%), Positives = 51/142 (35%), Gaps = 17/142 (11%) Query: 65 KANAAPIIVAYHFNSDLARLQ----------KAFPQGRTLDKDPCTIQEWNE-GKIPLLF 113 K +++ L L+ + + I E+N+ + + Sbjct: 754 KEQGHRVLLFAQTQQMLDILENFLIAGGYVYRRMDGFTPIKHRMALIDEFNDSDDVFIFI 813 Query: 114 AHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQ 173 G G NL G N ++ + W+ Q ER + G R V VY LI + Sbjct: 814 LTTKVGGLGTNLT-GANRVIIYDPDWNPSTDMQARERAW-----RIGQTRDVTVYRLITR 867 Query: 174 NTIDELVLQRLRTKSTIQDLLL 195 TI+E V QR K + + +L Sbjct: 868 GTIEEKVYQRQIYKHFLTNKIL 889 >gi|321475222|gb|EFX86185.1| hypothetical protein DAPPUDRAFT_313238 [Daphnia pulex] Length = 1791 Score = 96.9 bits (240), Expect = 2e-18, Method: Composition-based stats. Identities = 35/167 (20%), Positives = 70/167 (41%), Gaps = 20/167 (11%) Query: 36 ANGAV-YYDEEKHWKEVHDE----KIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQ 90 ANG++ D +H +++++ IIE ++ + RL + Sbjct: 1559 ANGSIDSPDTGGSVVSIHRALIFCQLRSMIDIIEND----LLKTHMKTVSYLRLDGSIAA 1614 Query: 91 GRTLDKDPCTIQEWNE-GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIE 149 G ++ +NE I +L G GLNL G + ++F W+ + Q ++ Sbjct: 1615 GS----RQGVVKRFNEDPSIDVLLLTTQVGGLGLNLT-GADTVIFVEHDWNPMKDLQAMD 1669 Query: 150 RIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 R + G K+ V VY LI + T++E ++ + K + +++ Sbjct: 1670 R-----AHRIGQKKVVNVYRLITRGTLEEKIMGLQKFKLQTANTIIS 1711 >gi|67517684|ref|XP_658628.1| hypothetical protein AN1024.2 [Aspergillus nidulans FGSC A4] gi|40746436|gb|EAA65592.1| hypothetical protein AN1024.2 [Aspergillus nidulans FGSC A4] Length = 866 Score = 96.9 bits (240), Expect = 2e-18, Method: Composition-based stats. Identities = 28/168 (16%), Positives = 61/168 (36%), Gaps = 20/168 (11%) Query: 46 KHWKEVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQK-----------AFPQGR 92 K+ L+ +I I++ F + L LQ Sbjct: 616 DETLVTASGKMLLLDRLIPCLLNKGHKILIFSQFKTQLDILQDWATHLRSWNCCRIDGAI 675 Query: 93 TLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERI 151 + I+ +N + + + G G+NL + ++ F W+ ++ Q Sbjct: 676 SQADRQAQIKAFNTDKDYKIFLLSTRAGGQGINL-VAADTVILFDSDWNPQQDLQA---- 730 Query: 152 GVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 R + G + V VY L + T+++ +L++ +K ++ L++ K Sbjct: 731 -QDRAHRIGQTKPVIVYRLATKGTVEQTLLEKADSKRRLERLVIQKGK 777 >gi|323454552|gb|EGB10422.1| hypothetical protein AURANDRAFT_10276 [Aureococcus anophagefferens] Length = 505 Score = 96.9 bits (240), Expect = 2e-18, Method: Composition-based stats. Identities = 33/164 (20%), Positives = 63/164 (38%), Gaps = 19/164 (11%) Query: 53 DEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQ----------KAFPQGRTLDKDPCT 100 K+ AL+ ++ + A ++V + L L+ G T Sbjct: 334 SSKLAALDAVLVRWKAQGHRVLVFSQTIAMLDVLEALVVARGWRYGRMDGGTAPAARQAT 393 Query: 101 IQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQA 159 +N K L+ + G GL+L G + +V + W+ + Q ER + Sbjct: 394 ADAFNASSKTFLMLLTTRTGGVGLSL-VGADRVVLYDPDWNPQTDAQARERSW-----RL 447 Query: 160 GFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETI 203 G + V +Y L+ TI+E + R K + + +L+ K+ + Sbjct: 448 GQTKPVTIYRLVCAGTIEEKIYHRQIFKQALTNKVLSDAKQRRL 491 >gi|297830680|ref|XP_002883222.1| SNF2 domain-containing protein [Arabidopsis lyrata subsp. lyrata] gi|297329062|gb|EFH59481.1| SNF2 domain-containing protein [Arabidopsis lyrata subsp. lyrata] Length = 1046 Score = 96.9 bits (240), Expect = 2e-18, Method: Composition-based stats. Identities = 30/169 (17%), Positives = 61/169 (36%), Gaps = 23/169 (13%) Query: 34 QL-ANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLA----RLQKAF 88 Q+ ++ Y D++ E L A I+ + L R+ ++ Sbjct: 861 QMPSSSGPYDDDDVTIVEPMR-----LHSSSPSQGAVKTIIFSQWTGMLDLVELRILESG 915 Query: 89 PQGRTLD-------KDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDL 141 + R LD +D + + ++ + GLN+ ++ LWW+ Sbjct: 916 IEFRRLDGTMSLAARDRAVKEFSKNPDVKVMLMSLKAGNLGLNM-VAACHVILLDLWWNP 974 Query: 142 EEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 Q I+R + G R V V + ++T+++ +L K T+ Sbjct: 975 TTEDQAIDR-----AHRIGQTRPVTVTRITIKDTVEDRILTLQEDKRTM 1018 >gi|256074706|ref|XP_002573664.1| helicase [Schistosoma mansoni] gi|238658849|emb|CAZ29896.1| helicase swr1, putative [Schistosoma mansoni] Length = 1156 Score = 96.9 bits (240), Expect = 2e-18, Method: Composition-based stats. Identities = 31/169 (18%), Positives = 58/169 (34%), Gaps = 18/169 (10%) Query: 31 KCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQK-- 86 K Q Y KI+ L + K + I++ F L L++ Sbjct: 897 KLCQFYETLSSYTLSPESIISGSGKIQWLNDNLPKLVSEGHRILIFSQFVIMLDILEEFL 956 Query: 87 --------AFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLW 138 + + I +N I + + G G+NL G + ++ + Sbjct: 957 RITNRRYIRMDGSTPVSERQTLIDRFNSSSIEVFLLSTRAGGLGINLT-GADTVIIHDID 1015 Query: 139 WDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTK 187 ++ +R R + G K V V LI++ T++E +L+ K Sbjct: 1016 FN-----PYNDRQAEDRCHRLGQKNPVHVIRLISEGTLEEGMLRIASEK 1059 >gi|299751215|ref|XP_001830131.2| Fun30p [Coprinopsis cinerea okayama7#130] gi|298409272|gb|EAU91796.2| Fun30p [Coprinopsis cinerea okayama7#130] Length = 1123 Score = 96.9 bits (240), Expect = 2e-18, Method: Composition-based stats. Identities = 34/153 (22%), Positives = 60/153 (39%), Gaps = 19/153 (12%) Query: 55 KIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAFPQGRTL----------DKDPCTIQ 102 K+ L +IE + +++ F L LQ D + Sbjct: 934 KVTTLLKLIEGYRKEDRKMLIFSQFTQILDILQVILKNKGIKFLVLTGSTPVDVRQSLVD 993 Query: 103 EWNEG-KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGF 161 E+ E IP+ + G G+NL +++V F ++ +Q R + G Sbjct: 994 EFTEDEDIPIFLLSTKAGGMGINLT-AASVVVMFDQDFNPHNDKQA-----QDRAYRIGQ 1047 Query: 162 KRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 KR V V LI++ TI+E +L+ TK + + + Sbjct: 1048 KRDVDVVKLISRGTIEEDMLKLGETKLALDEAV 1080 >gi|261205500|ref|XP_002627487.1| SNF2 family helicase/ATPase [Ajellomyces dermatitidis SLH14081] gi|239592546|gb|EEQ75127.1| SNF2 family helicase/ATPase [Ajellomyces dermatitidis SLH14081] Length = 1072 Score = 96.9 bits (240), Expect = 2e-18, Method: Composition-based stats. Identities = 32/168 (19%), Positives = 62/168 (36%), Gaps = 18/168 (10%) Query: 42 YDEEKHWKEVHDEKIKALEVIIEKANAA-PIIVAYHFNSDLARLQKAFPQ-----GRTLD 95 DE + + KI+ L I++K + IV F S L +++ R Sbjct: 823 DDEPETPDHLASTKIRHLMKILKKESGDYKFIVFSFFTSMLNKIEPFLKDSHIGYARYDG 882 Query: 96 KDPCTIQEW------NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIE 149 ++E N K +L + GLNL + +V +W+ +Q I+ Sbjct: 883 AMRNDLREHSLDRLRNSPKTRVLLCSLRAGSLGLNLT-AASRVVILEPFWNPFVEEQAID 941 Query: 150 RIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 R+ + V +Y L + T++E ++ K + + + Sbjct: 942 RV-----HRLNQTVDVKIYKLTIKGTVEERIVDLQERKRELANATIEG 984 >gi|213404262|ref|XP_002172903.1| ATP-dependent DNA helicase Hrp3 [Schizosaccharomyces japonicus yFS275] gi|212000950|gb|EEB06610.1| ATP-dependent DNA helicase Hrp3 [Schizosaccharomyces japonicus yFS275] Length = 1356 Score = 96.9 bits (240), Expect = 2e-18, Method: Composition-based stats. Identities = 28/159 (17%), Positives = 62/159 (38%), Gaps = 20/159 (12%) Query: 52 HDEKIKALEVIIEKAN--AAPIIVAYHFNSDLARL----------QKAFPQGRTLDKDPC 99 + K+ L+ ++ + + +++ L L + Sbjct: 685 NSGKMVLLDKLLTRLHRDGHRVLIFSQMVRMLDILGDYMSLRGYPFQRLDGTVPAATRRI 744 Query: 100 TIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 +I +N P + + G G+NL + ++ F W+ + Q + R Sbjct: 745 SIDHFNAPNSPDFVFLLSTRAGGLGINLMT-ADTVIIFDSDWNPQADLQAMAR-----AH 798 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + G K V VY ++++TI+E VL+R R K ++ +++ Sbjct: 799 RIGQKNHVMVYRFLSKDTIEEDVLERARRKMILEYAIIS 837 >gi|221488620|gb|EEE26834.1| DNA repair and recombination protein RAD54, putative [Toxoplasma gondii GT1] Length = 872 Score = 96.9 bits (240), Expect = 2e-18, Method: Composition-based stats. Identities = 32/149 (21%), Positives = 63/149 (42%), Gaps = 19/149 (12%) Query: 61 VIIEKANAAPIIVAYHFNSDLA---RLQK------AFPQGRT-LDKDPCTIQEWNEGKIP 110 +I I++ ++ L R+ + G+T + K I ++N+ P Sbjct: 522 DVIRTTTNDKIVLISNYTQTLDLFDRMCRDCGYPVMRLDGQTSIKKRHAMITKFNDPMNP 581 Query: 111 ---LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFV 167 + + G G+NL G N LV F W+ +Q + R+ + G K++ ++ Sbjct: 582 HSFVFLLSSKAGGCGVNL-IGANRLVLFDPDWNPANDKQALARVW-----RDGQKKSCYI 635 Query: 168 YYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 Y + TI+E + QR K + +L++ Sbjct: 636 YRFFSTGTIEEKIYQRQICKDGLSAMLVS 664 >gi|237837635|ref|XP_002368115.1| DNA repair protein RAD54, putative [Toxoplasma gondii ME49] gi|211965779|gb|EEB00975.1| DNA repair protein RAD54, putative [Toxoplasma gondii ME49] gi|221509119|gb|EEE34688.1| transcriptional regulator atrx, putative [Toxoplasma gondii VEG] Length = 873 Score = 96.9 bits (240), Expect = 2e-18, Method: Composition-based stats. Identities = 32/149 (21%), Positives = 63/149 (42%), Gaps = 19/149 (12%) Query: 61 VIIEKANAAPIIVAYHFNSDLA---RLQK------AFPQGRT-LDKDPCTIQEWNEGKIP 110 +I I++ ++ L R+ + G+T + K I ++N+ P Sbjct: 522 DVIRTTTNDKIVLISNYTQTLDLFDRMCRDCGYPVMRLDGQTSIKKRHAMITKFNDPMNP 581 Query: 111 ---LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFV 167 + + G G+NL G N LV F W+ +Q + R+ + G K++ ++ Sbjct: 582 HSFVFLLSSKAGGCGVNL-IGANRLVLFDPDWNPANDKQALARVW-----RDGQKKSCYI 635 Query: 168 YYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 Y + TI+E + QR K + +L++ Sbjct: 636 YRFFSTGTIEEKIYQRQICKDGLSAMLVS 664 >gi|156550287|ref|XP_001603076.1| PREDICTED: similar to CG2684-PA [Nasonia vitripennis] Length = 1032 Score = 96.9 bits (240), Expect = 2e-18, Method: Composition-based stats. Identities = 47/209 (22%), Positives = 79/209 (37%), Gaps = 31/209 (14%) Query: 5 HKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIE 64 + + D + +N A N +K V+ DE + K K +E I+E Sbjct: 827 DEEVEDYVADYKIDNRVAANLLTKKN--------PVFDDERRSSKVRAIVKT--IEEILE 876 Query: 65 KANAAPIIVAYHFNSDLARLQKAFPQGR-----------TLDKDPCTIQEWNEG--KIPL 111 K IIV + S L + K + + ++N+ + Sbjct: 877 K--GDKIIVVSQWTSFLGIVAKNLDDIEDAKYAMFTGNVAVKNRQAIVDKFNDPNEDTNI 934 Query: 112 LFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLI 171 L + G GLNL G N L+ + W+ + Q +RI + G K+ V+VY I Sbjct: 935 LLLSLTAGGVGLNL-VGANHLLLIDIHWNPQLESQAQDRI-----YRFGQKKNVYVYKFI 988 Query: 172 AQNTIDELVLQRLRTKSTIQDLLLNALKK 200 ++TI+E V K I + +L + Sbjct: 989 CKDTIEERVKNLQDKKLEIANHVLTGSRA 1017 >gi|134117101|ref|XP_772777.1| hypothetical protein CNBK1510 [Cryptococcus neoformans var. neoformans B-3501A] gi|50255395|gb|EAL18130.1| hypothetical protein CNBK1510 [Cryptococcus neoformans var. neoformans B-3501A] Length = 1409 Score = 96.9 bits (240), Expect = 2e-18, Method: Composition-based stats. Identities = 46/231 (19%), Positives = 80/231 (34%), Gaps = 33/231 (14%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQL--ANGAVYY----DEEKHWKEVHDE- 54 K Y Q+ + + +QL Y DE+ DE Sbjct: 798 KLYESVQKYKTLPTDMSVAKPQKRQNLQNALMQLRKICNHPYVFREVDEDFTVGNTTDEQ 857 Query: 55 ------KIKALEVIIEKA--NAAPIIVAYHFN---------SDLARLQKAFPQGRTLDKD 97 K + L+ I+ K +++ + D + G T +D Sbjct: 858 IIRVAGKFELLDRILPKLFKTGHKVLIFFQMTEIMTIVSDFFDFRGWKYCRLDGSTKAED 917 Query: 98 PCTI-QEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 T+ +N+ P + + G GLNLQ + ++ + W+ Q Sbjct: 918 RQTLLSTFNDPNSPYQVFILSTRAGGLGLNLQ-SADTVIIYDTDWNPHADLQA-----QD 971 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIHV 205 R + G K+ V V LI+ T++ELVL R + K I ++ A K + + Sbjct: 972 RAHRIGQKKEVRVLRLISSGTVEELVLARAQRKLEIDGKVIQAGKFDEVTT 1022 >gi|302406532|ref|XP_003001102.1| TATA-binding protein-associated factor MOT1 [Verticillium albo-atrum VaMs.102] gi|261360360|gb|EEY22788.1| TATA-binding protein-associated factor MOT1 [Verticillium albo-atrum VaMs.102] Length = 1876 Score = 96.9 bits (240), Expect = 2e-18, Method: Composition-based stats. Identities = 30/142 (21%), Positives = 56/142 (39%), Gaps = 20/142 (14%) Query: 69 APIIVAYHFNSDLARLQK-------------AFPQGRTLDKDPCTIQEWN-EGKIPLLFA 114 +V L +Q G +K + ++N + +L Sbjct: 1653 HRALVFCQMKEMLDMVQNTVLKSMLPSVSFLRLDGGVEANKRQAIVNKFNQDPSYDVLLL 1712 Query: 115 HPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQN 174 + G GLNL G + ++F W+ ++ Q ++R + G K+ V VY LI + Sbjct: 1713 TTSVGGLGLNLT-GADTVIFVEHDWNPQKDLQAMDR-----AHRIGQKKVVNVYRLITRG 1766 Query: 175 TIDELVLQRLRTKSTIQDLLLN 196 T++E +L R K + ++N Sbjct: 1767 TLEEKILSLQRFKIDVASTVVN 1788 >gi|294462184|gb|ADE76644.1| unknown [Picea sitchensis] Length = 407 Score = 96.9 bits (240), Expect = 2e-18, Method: Composition-based stats. Identities = 33/148 (22%), Positives = 59/148 (39%), Gaps = 19/148 (12%) Query: 59 LEVIIEKANAAPIIVAYHFNSDLARLQK----------AFPQGRTLDKDPCTIQEWNEGK 108 L + K + ++V ++ L + ++ K +Q +N+ Sbjct: 8 LAHLFTKTDDRIVLV-SNYTQTLDLFAQICRERNYPFLRLDGTTSIGKRRKLVQRFNDPS 66 Query: 109 IP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVF 166 + G GLNL GGN LV F W+ +Q R+ + G K+ V+ Sbjct: 67 QNEFAFLLSSKAGGCGLNL-IGGNRLVLFDPDWNPANDKQAAARVW-----RDGQKKRVY 120 Query: 167 VYYLIAQNTIDELVLQRLRTKSTIQDLL 194 +Y + TI+E V QR +K +Q ++ Sbjct: 121 IYRFLTTGTIEEKVYQRQMSKEGLQKVV 148 >gi|328785433|ref|XP_396195.3| PREDICTED: chromatin-remodeling complex ATPase chain Iswi isoform 1 [Apis mellifera] Length = 959 Score = 96.9 bits (240), Expect = 2e-18, Method: Composition-based stats. Identities = 46/230 (20%), Positives = 90/230 (39%), Gaps = 40/230 (17%) Query: 1 MKQY---HKFQRELYCDLQGENIEAFNSASKTVK------CLQL---ANGAVYYD--EEK 46 +K Y K QRE Y + ++I+ N A K K +QL N +D E Sbjct: 361 IKVYIGLSKMQREWYTKVLMKDIDIVNGAGKIEKMRLQNILMQLRKCCNHPYLFDGAEPG 420 Query: 47 HWKEVHDE------KIKALEVIIEKAN--AAPIIVAYHFNSDLARL---------QKAFP 89 + K+ L+ ++ K + +++ L L Q Sbjct: 421 PPYTTDEHLVYNCGKMVILDKLLPKLQQQESRVLIFSQMTRMLDILEDYCHWRGFQYCRL 480 Query: 90 QGRTLDKDPC-TIQEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 G T +D I E+N + + + G G+NL ++++ + W+ + Q Sbjct: 481 DGNTAHEDRQRQINEYNAPGSEKFIFMLSTRAGGLGINL-ATADVVIIYDSDWNPQMDLQ 539 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 ++R + G ++ V V+ I +NT++E +++R K + L++ Sbjct: 540 AMDR-----AHRIGQQKQVRVFRFITENTVEEKIVERAEVKLRLDKLVIQ 584 >gi|195999278|ref|XP_002109507.1| hypothetical protein TRIADDRAFT_53614 [Trichoplax adhaerens] gi|190587631|gb|EDV27673.1| hypothetical protein TRIADDRAFT_53614 [Trichoplax adhaerens] Length = 619 Score = 96.5 bits (239), Expect = 2e-18, Method: Composition-based stats. Identities = 45/255 (17%), Positives = 89/255 (34%), Gaps = 65/255 (25%) Query: 1 MKQYHKFQR-----ELYCDLQG-----ENIEAFNSASKTVKCLQLANGAVYYDEEKHWKE 50 M+ Y F + EL DL + ++ + N V EKH + Sbjct: 294 MELYANFTKSRATDELDLDLSSLEESKKEPSKMHAFQALQYLRLICNHPVLVLNEKHPQY 353 Query: 51 V-----------------HDEKIKALEVII-EKANAAP-----------------IIVAY 75 H K+ AL+ ++ E P +V + Sbjct: 354 YEITSRLSRENLELSSIQHSAKLMALKQLLLECGIGIPTTNVASVSVMPVVAQHRALVFF 413 Query: 76 HFNSDLARLQKAFPQGR-------------TLDKDPCTIQEWN-EGKIPLLFAHPASCGH 121 + + +++ + + ++ + + +N + I ++ G Sbjct: 414 QSKAMMKLVEEKLFKDKDSTVAYVKLSGDVSIKERAEIVSRFNKDPSIDVMLLTTKVGGV 473 Query: 122 GLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVL 181 GLNL G + ++F W+ Q ++R + G K+ V VY LI +NT++E +L Sbjct: 474 GLNLT-GADTVIFVEHDWNPMADAQAMDR-----AHRIGQKKVVNVYRLITRNTLEEKIL 527 Query: 182 QRLRTKSTIQDLLLN 196 KS I + +++ Sbjct: 528 GLQNFKSKIANTVIS 542 >gi|189188400|ref|XP_001930539.1| helicase SWR1 [Pyrenophora tritici-repentis Pt-1C-BFP] gi|187972145|gb|EDU39644.1| helicase SWR1 [Pyrenophora tritici-repentis Pt-1C-BFP] Length = 1794 Score = 96.5 bits (239), Expect = 2e-18, Method: Composition-based stats. Identities = 33/165 (20%), Positives = 62/165 (37%), Gaps = 20/165 (12%) Query: 46 KHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQK-------------AFPQGR 92 V D+ A + E + +V L +Q G Sbjct: 1544 GASDVVSDKSANANGDLPEAVSQHRALVFCQMKEMLDMVQHNVLEKLLPSVQFMRLDGGV 1603 Query: 93 TLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERI 151 K + ++N + +L + G GLNL G + ++F W+ ++ Q ++R Sbjct: 1604 EATKRQEIVNKFNTDPSYDVLLLTTSVGGLGLNLT-GADTVIFVEHDWNPQKDIQAMDR- 1661 Query: 152 GVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + G K+ V VY ++ + T++E +L R K I ++N Sbjct: 1662 ----AHRIGQKKVVNVYRIVTRGTLEEKILNLQRFKIDIASTVVN 1702 >gi|255947266|ref|XP_002564400.1| Pc22g03590 [Penicillium chrysogenum Wisconsin 54-1255] gi|211591417|emb|CAP97647.1| Pc22g03590 [Penicillium chrysogenum Wisconsin 54-1255] Length = 1100 Score = 96.5 bits (239), Expect = 2e-18, Method: Composition-based stats. Identities = 43/230 (18%), Positives = 88/230 (38%), Gaps = 43/230 (18%) Query: 6 KFQRELYCDLQGENIEAFNSAS--------KTVKCLQLAN-------------GAVYYDE 44 + QR Y + ++I+A N A+ +QL G Y + Sbjct: 429 EMQRRWYQKILEKDIDAVNGAAGKRESKTRLLNIVMQLRKCCNHPYLFEGAEPGPPYTTD 488 Query: 45 EKHWKEVHDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQ---------KAFPQGRT 93 E + K+ L+ +++ +A+ + +++ + L L+ G T Sbjct: 489 EHLV--FNSGKMVILDKLLKRMQADGSRVLIFSQMSRVLDILEDYCCFRDYNYCRIDGTT 546 Query: 94 LDKDP-CTIQEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 +D I ++N+ + + G G+NL +I+V F W+ + Q ++R Sbjct: 547 AHEDRIAAIDDYNKPGSDKFVFLLTTRAGGLGINLT-SADIVVLFDSDWNPQADLQAMDR 605 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKK 200 + G + V V+ I + I+E VL+R K + L++ + Sbjct: 606 -----AHRIGQTKQVKVFRFITEKAIEEKVLERAAQKLRLDQLVIQQGRS 650 >gi|20809475|gb|AAH29381.1| HELLS protein [Homo sapiens] Length = 348 Score = 96.5 bits (239), Expect = 2e-18, Method: Composition-based stats. Identities = 24/159 (15%), Positives = 60/159 (37%), Gaps = 19/159 (11%) Query: 50 EVHDEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQK----------AFPQGRTLDKD 97 + K L+ ++ + +++ S L L + + Sbjct: 105 VTNSGKFLILDRMLPELKKRGHKVLLFSQMTSMLDILMDYCHLRDFNFSRLDGSMSYSER 164 Query: 98 PCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 + +N + ++ + + G G+NL + ++ + + + Q +R Sbjct: 165 EKNMHSFNTDPEVFIFLVSTRAGGLGINLT-AADTVIIYDSDCNPQSDLQAQDRC----- 218 Query: 157 RQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 + G + V VY L+ NTID+ +++R K ++ L++ Sbjct: 219 HRIGQTKPVVVYRLVTANTIDQKIVERAAAKRKLEKLII 257 >gi|242778005|ref|XP_002479148.1| dsDNA-dependent ATPase (Rad54b), putative [Talaromyces stipitatus ATCC 10500] gi|218722767|gb|EED22185.1| dsDNA-dependent ATPase (Rad54b), putative [Talaromyces stipitatus ATCC 10500] Length = 1037 Score = 96.5 bits (239), Expect = 2e-18, Method: Composition-based stats. Identities = 29/157 (18%), Positives = 59/157 (37%), Gaps = 19/157 (12%) Query: 54 EKIKALEVIIEKANAAPIIVAYHFNSDLARL----------QKAFPQGRTLDKDPCTIQE 103 + L + + + I++ ++ S L L K + + Sbjct: 652 RVLDQLLHNLRTSTSEKIVIVSNYTSTLNLLGVLLTSLSLPFLRLDGSTPSSKRQSLVDD 711 Query: 104 WNEG---KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 +N + G GLNL G + LV + + W+ Q + RI + G Sbjct: 712 FNRAPASTCFAFLLSAKAGGTGLNLT-GASRLVLYDVDWNPATDLQAMARI-----HRDG 765 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 KR ++Y ++ + ++E + QR TK + D ++ + Sbjct: 766 QKRHCYIYRIMLKGALEEKIWQRQVTKIGLADSVMES 802 >gi|239611302|gb|EEQ88289.1| SNF2 family helicase/ATPase [Ajellomyces dermatitidis ER-3] Length = 1072 Score = 96.5 bits (239), Expect = 2e-18, Method: Composition-based stats. Identities = 32/168 (19%), Positives = 62/168 (36%), Gaps = 18/168 (10%) Query: 42 YDEEKHWKEVHDEKIKALEVIIEKANAA-PIIVAYHFNSDLARLQKAFPQ-----GRTLD 95 DE + + KI+ L I++K + IV F S L +++ R Sbjct: 823 DDEPETPDHLASTKIRHLMKILKKESGDYKFIVFSFFTSMLNKIEPFLKDSHIGYARYDG 882 Query: 96 KDPCTIQEW------NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIE 149 ++E N K +L + GLNL + +V +W+ +Q I+ Sbjct: 883 AMRNDLREHSLDRLRNSPKTRVLLCSLRAGSLGLNLT-AASRVVILEPFWNPFVEEQAID 941 Query: 150 RIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 R+ + V +Y L + T++E ++ K + + + Sbjct: 942 RV-----HRLNQTVDVKIYKLTIKGTVEERIVDLQERKRELANATIEG 984 >gi|255936215|ref|XP_002559134.1| Pc13g07020 [Penicillium chrysogenum Wisconsin 54-1255] gi|211583754|emb|CAP91771.1| Pc13g07020 [Penicillium chrysogenum Wisconsin 54-1255] Length = 1116 Score = 96.5 bits (239), Expect = 2e-18, Method: Composition-based stats. Identities = 31/170 (18%), Positives = 63/170 (37%), Gaps = 26/170 (15%) Query: 39 AVYYDEEKHWKEVHDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQK---------- 86 A Y D E+ K+K L+ ++E + ++ L ++K Sbjct: 664 ADYGDAER------SGKMKVLKGLLEVWRDTGHKTLLFTQGRLMLDIIEKFLGVLGGFNC 717 Query: 87 -AFPQGRTLDKDPCTIQEWNE-GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEH 144 + + + ++N I + G G+NL G + ++ + W+ Sbjct: 718 RRMDGTTPIKERQSLVNDFNNDPNIHVFLLTTRVGGIGVNLT-GADRVIIYDPDWNPSTD 776 Query: 145 QQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 Q ER + G KR V ++ L+ + TI+E + R K + + + Sbjct: 777 LQARERAW-----RLGQKRDVTIFRLMTKGTIEEKIYHRQIFKQFLTNKI 821 >gi|157128256|ref|XP_001661368.1| hypothetical protein AaeL_AAEL002341 [Aedes aegypti] gi|108882255|gb|EAT46480.1| conserved hypothetical protein [Aedes aegypti] Length = 851 Score = 96.5 bits (239), Expect = 2e-18, Method: Composition-based stats. Identities = 34/161 (21%), Positives = 65/161 (40%), Gaps = 22/161 (13%) Query: 51 VHDEKIKALEVIIEKA---NAAPIIVAYHFNSDLARL---------QKAFPQGRTLDKDP 98 K+ L+ ++E +IV+Y+ L + + G T +D Sbjct: 572 TDSGKLAVLDSLLETLIQRQEKAVIVSYYGK-TLDMIMGLCEHYNYKYCRLDGSTPSQDR 630 Query: 99 -CTIQEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTR 155 + +N + + G GLNL G + L+ + W+ Q + RI Sbjct: 631 CKIVSSFNSPSSDTFIFLLSAKAGGIGLNLT-GASRLILYDNDWNPASDLQAMSRIW--- 686 Query: 156 QRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + G R VF+Y LI +I+E + QR +K+++ +++ Sbjct: 687 --RDGQTRNVFIYRLITAFSIEEKIYQRQISKTSLSGTVVD 725 >gi|66813000|ref|XP_640679.1| SNF2-related domain-containing protein [Dictyostelium discoideum AX4] gi|60468700|gb|EAL66702.1| SNF2-related domain-containing protein [Dictyostelium discoideum AX4] Length = 1655 Score = 96.5 bits (239), Expect = 2e-18, Method: Composition-based stats. Identities = 32/157 (20%), Positives = 63/157 (40%), Gaps = 20/157 (12%) Query: 53 DEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQK-----------AFPQGRTLDKDPC 99 K+K +E I+ +++ L +++ ++ + C Sbjct: 1112 SAKLKVVETILPLWFKQGDKVLLFCQTRQMLDIVEQYIRDSTQFNYLRMDGTTSIRQRQC 1171 Query: 100 TIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQ 158 ++++N + + + G GLNL G N ++ F W+ Q ER+ + Sbjct: 1172 LVEQFNIDPSLFIFLLTTKVGGLGLNLT-GANRVILFDPDWNPSTDMQARERV-----YR 1225 Query: 159 AGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 G K+AV +Y LI TI+E + R K + + +L Sbjct: 1226 IGQKKAVTIYRLITLGTIEEKIYHRQIYKQFLTNKIL 1262 >gi|115891453|ref|XP_781410.2| PREDICTED: similar to Chromodomain helicase DNA binding protein 1 [Strongylocentrotus purpuratus] gi|115930718|ref|XP_001181304.1| PREDICTED: similar to Chromodomain helicase DNA binding protein 1 [Strongylocentrotus purpuratus] Length = 1335 Score = 96.5 bits (239), Expect = 2e-18, Method: Composition-based stats. Identities = 44/223 (19%), Positives = 85/223 (38%), Gaps = 35/223 (15%) Query: 2 KQYHKFQ-----RELYCDLQGENIEAFNSASKTVKCLQLANGAVY-------YDEEKHWK 49 KQY+KF + L L+G N + KC N ++ D + + Sbjct: 731 KQYYKFILTRNFKALCKGLKGNTSSFINIMMELKKC---CNHSLLIRPPEDESDPDLKYI 787 Query: 50 EVHDEKIKALEVIIEKAN--AAPIIVAYHFNSDL----ARLQKAFPQGRTLDK------D 97 K+ L+ ++ + +++ L LQ Q + LD Sbjct: 788 IRGSGKLVLLDKLLTRLQERGHRVLIFSQMVRMLDILSEYLQYRHFQHQRLDGSIRGEIR 847 Query: 98 PCTIQEWN-EGKIPL-LFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTR 155 + +N EG + G GLNL + ++ F W+ + Q + R Sbjct: 848 KQALDHFNAEGSQDFCFLLSTRAGGLGLNL-ASADTVIIFDSDWNPQNDIQAMAR----- 901 Query: 156 QRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNAL 198 + G +R V +Y L+ ++TI+E +++R + K + L++ + Sbjct: 902 AHRIGQRRQVNIYRLVTKDTIEEEIIERAKRKMVLDHLVIQRM 944 >gi|168058055|ref|XP_001781026.1| SNF2 family DNA-dependent ATPase [Physcomitrella patens subsp. patens] gi|162667507|gb|EDQ54135.1| SNF2 family DNA-dependent ATPase [Physcomitrella patens subsp. patens] Length = 808 Score = 96.5 bits (239), Expect = 2e-18, Method: Composition-based stats. Identities = 39/215 (18%), Positives = 80/215 (37%), Gaps = 38/215 (17%) Query: 7 FQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYD--------EEKHWKEVHDEKIKA 58 ++E + A + + ++ + + +D E +H E K+K Sbjct: 293 LKKESPKIIGDSPGTATSLQNIVIQLRKACSHPYLFDGIEPEPFQEGEHIVE-ASGKLKM 351 Query: 59 LEVIIEKAN--AAPIIVAYHFNSDLARLQKAFPQG----RTLDKDPCTIQEWN------- 105 L+VI++K + +++ L LQ LD + +N Sbjct: 352 LDVILKKLHASGHRVLIFAQMTRTLDILQDYLEYRSYSYERLDGSVRAEERFNAVHSFSA 411 Query: 106 ----------EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTR 155 G + + G GLNL G + ++F+ W+ + +Q ++R Sbjct: 412 GHSKCGGDAKSGSAFVFLLTTRAGGVGLNL-IGADTVIFYEQDWNPQADKQALQR----- 465 Query: 156 QRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 + G V LI ++TIDE++++R + K + Sbjct: 466 AHRIGQISPVLAINLITRHTIDEVIMRRAKKKLEL 500 >gi|156383405|ref|XP_001632824.1| predicted protein [Nematostella vectensis] gi|156219886|gb|EDO40761.1| predicted protein [Nematostella vectensis] Length = 1022 Score = 96.5 bits (239), Expect = 2e-18, Method: Composition-based stats. Identities = 43/230 (18%), Positives = 92/230 (40%), Gaps = 42/230 (18%) Query: 2 KQYH---KFQRELYCDLQGENIEAFNSASKTVK------CLQL---ANGAVYYD------ 43 K Y K QR Y + ++I+ N A KT K +QL N +D Sbjct: 375 KVYTGLTKMQRSWYTKILMKDIDVVNGAGKTDKMRLLNILMQLRKCCNHPYLFDGAEPGP 434 Query: 44 ---EEKHWKEVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQ---------KAFP 89 + H E + K++ L+ ++ + + +++ L L+ Sbjct: 435 PYTTDVHLIE-NSGKMRVLDKLLARLKQEGSRVLIFSQMTRLLDILEDYCLWRQYDYCRL 493 Query: 90 QGRTLDKDPCT-IQEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 G+T ++ I +N + + G G+NL +I++ + W+ + Q Sbjct: 494 DGQTPHEERQAYINSFNMPGSTKFIFMLSTRAGGLGINL-ATADIVILYDSDWNPQVDLQ 552 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 ++R + G K+ V V+ I+++T++E +++R K + +++ Sbjct: 553 AMDR-----AHRIGQKKQVKVFRFISESTVEERIIERAEMKLRLDAVVIQ 597 >gi|156062402|ref|XP_001597123.1| hypothetical protein SS1G_01317 [Sclerotinia sclerotiorum 1980] gi|154696653|gb|EDN96391.1| hypothetical protein SS1G_01317 [Sclerotinia sclerotiorum 1980 UF-70] Length = 892 Score = 96.5 bits (239), Expect = 2e-18, Method: Composition-based stats. Identities = 26/140 (18%), Positives = 52/140 (37%), Gaps = 18/140 (12%) Query: 68 AAPIIVAYHFNSDLARLQK-----------AFPQGRTLDKDPCTIQEWNE-GKIPLLFAH 115 +++ F + L L+ D I+E+NE L Sbjct: 670 GHKVLIFSQFKTQLDILEDYARELRGWKVCRIDGSVAQDFRRQQIKEFNEDPDFKLFLLS 729 Query: 116 PASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNT 175 + G G+NL + ++ F W+ ++ Q R + G + V V+ L + T Sbjct: 730 TRAGGQGINL-ASADTVILFDSDWNPQQDLQA-----QDRAHRIGQTKPVVVFRLATKGT 783 Query: 176 IDELVLQRLRTKSTIQDLLL 195 ++E +L K ++ L++ Sbjct: 784 VEESLLMSADAKRRLEKLVI 803 >gi|67527878|ref|XP_661791.1| hypothetical protein AN4187.2 [Aspergillus nidulans FGSC A4] gi|40740096|gb|EAA59286.1| hypothetical protein AN4187.2 [Aspergillus nidulans FGSC A4] gi|259481212|tpe|CBF74527.1| TPA: TBP associated factor (Mot1), putative (AFU_orthologue; AFUA_1G05830) [Aspergillus nidulans FGSC A4] Length = 1904 Score = 96.5 bits (239), Expect = 2e-18, Method: Composition-based stats. Identities = 39/190 (20%), Positives = 70/190 (36%), Gaps = 40/190 (21%) Query: 41 YYDEEKHWKEVHDE--KIKALEVI-------IEKANA-----------APIIVAYHFNSD 80 Y E+K + K+ AL+ + +E +V Sbjct: 1638 YLQEKKSYLRDVSHAPKLSALKDLLLDCGIGVEPTEGNLGAGASYVSPHRALVFCQMKEM 1697 Query: 81 LAR-----LQKAFPQGRTLD--------KDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQ 126 L LQK P + L + + +N + +L + G GLNL Sbjct: 1698 LDIVQSEVLQKLLPSVQFLRLDGAVEATRRQDIVNRFNSDPSYDVLLLTTSVGGLGLNLT 1757 Query: 127 YGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRT 186 G + ++F W+ ++ Q ++R + G K+ V VY LI + T++E +L R Sbjct: 1758 -GADTVIFVEHDWNPQKDIQAMDR-----AHRIGQKKVVNVYRLITRGTLEEKILNLQRF 1811 Query: 187 KSTIQDLLLN 196 K + ++N Sbjct: 1812 KIDVASTVVN 1821 >gi|330925332|ref|XP_003301007.1| hypothetical protein PTT_12406 [Pyrenophora teres f. teres 0-1] gi|311324570|gb|EFQ90879.1| hypothetical protein PTT_12406 [Pyrenophora teres f. teres 0-1] Length = 1935 Score = 96.5 bits (239), Expect = 2e-18, Method: Composition-based stats. Identities = 33/165 (20%), Positives = 62/165 (37%), Gaps = 20/165 (12%) Query: 46 KHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQK-------------AFPQGR 92 V D+ A + E + +V L +Q G Sbjct: 1685 GASDVVSDKSANANGDLPEAVSQHRALVFCQMKEMLDMVQHNVLEKLLPSVQFMRLDGGV 1744 Query: 93 TLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERI 151 K + ++N + +L + G GLNL G + ++F W+ ++ Q ++R Sbjct: 1745 EATKRQEIVNKFNTDPSYDVLLLTTSVGGLGLNLT-GADTVIFVEHDWNPQKDIQAMDR- 1802 Query: 152 GVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + G K+ V VY ++ + T++E +L R K I ++N Sbjct: 1803 ----AHRIGQKKVVNVYRIVTRGTLEEKILNLQRFKIDIASTVVN 1843 >gi|195577949|ref|XP_002078829.1| GD22327 [Drosophila simulans] gi|194190838|gb|EDX04414.1| GD22327 [Drosophila simulans] Length = 847 Score = 96.5 bits (239), Expect = 2e-18, Method: Composition-based stats. Identities = 29/164 (17%), Positives = 64/164 (39%), Gaps = 19/164 (11%) Query: 52 HDEKIKALEVIIEKA--NAAPIIVAYHFNSDLA------RLQK----AFPQGRTLDKDPC 99 K + L+ ++ K +++ F L R++K ++ Sbjct: 653 DSGKFRYLDTLLPKLKEEGHRVLLFSQFTMMLDIVEEYLRIRKFGFCRLDGATAVNVRQD 712 Query: 100 TIQEWNEGK-IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQ 158 I ++N I + + G G+NL ++ + ++ +Q +R + Sbjct: 713 LITDFNGDDSIFVFLLSTKAGGVGINLTAADTCVIH-DIDFNPYNDKQAEDRC-----HR 766 Query: 159 AGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKET 202 G +R V +Y LI+++TI+E +L K ++ + + K E Sbjct: 767 MGQQRPVTIYRLISESTIEEGILMAAEEKLKLEKDITSNEKGEV 810 >gi|313237190|emb|CBY12409.1| unnamed protein product [Oikopleura dioica] Length = 1294 Score = 96.5 bits (239), Expect = 2e-18, Method: Composition-based stats. Identities = 29/169 (17%), Positives = 60/169 (35%), Gaps = 18/169 (10%) Query: 33 LQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFP--- 89 ++AN A+ D + K++ L +++ I++ L + K Sbjct: 420 RRMANNAI-KDIDLDLLLSESGKMQVLADLVDAIIPEKILIFSQSIKILDIIAKILDDKT 478 Query: 90 --------QGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDL 141 + + +D + ++ +I + GL L ++ + W+ Sbjct: 479 VNFIRMDGKDKLPIRDEKVKRFQSDKRIKVFMLTTGVGAVGLTLT-AATRVIVYDPDWNP 537 Query: 142 EEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 Q ++R + G R V V+ LI TI+E + R K +I Sbjct: 538 GRDDQAVDR-----AYRIGQTRPVVVFRLITCETIEEKIYSRQLFKKSI 581 >gi|16332119|ref|NP_442847.1| Snf2/Rad54 family helicase [Synechocystis sp. PCC 6803] gi|1653748|dbj|BAA18659.1| helicase of the snf2/rad54 family [Synechocystis sp. PCC 6803] Length = 1039 Score = 96.5 bits (239), Expect = 2e-18, Method: Composition-based stats. Identities = 27/154 (17%), Positives = 55/154 (35%), Gaps = 21/154 (13%) Query: 57 KALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQ-----------GRTLDKDPCTIQEWN 105 + LE II + +++ F S L+ + G ++ ++ + Sbjct: 862 EMLEEII--SEGDRVLIFTQFASWGHLLKPYLEKYFNQEVLYLHGGTPAEQRQALVERFQ 919 Query: 106 EGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKR 163 + L + G GLNL N + WW+ Q +R + G R Sbjct: 920 QDPNSPYLFILSLKAGGTGLNLTR-ANHVFHVDRWWNPAVENQATDR-----AFRIGQTR 973 Query: 164 AVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 V V+ + T++E + + K + + ++A Sbjct: 974 NVQVHKFVCTGTLEEKINAMMADKQQLAEQTVDA 1007 >gi|15291937|gb|AAK93237.1| LD32234p [Drosophila melanogaster] Length = 1095 Score = 96.5 bits (239), Expect = 2e-18, Method: Composition-based stats. Identities = 29/156 (18%), Positives = 63/156 (40%), Gaps = 19/156 (12%) Query: 55 KIKALEVIIEKA--NAAPIIVAYHFNSDLARLQ---------KAFPQGRTLDKDPCTI-Q 102 K++ ++ ++ + N +++ L L+ G T + + + Sbjct: 257 KLQTMDRLLRQLKVNGHRVLIFTQMTKMLDVLEAFLNYHGHIYLRLDGSTRVEQRQILME 316 Query: 103 EWNEGK-IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGF 161 +N K I S G G+NL G + ++F+ W+ Q +R + G Sbjct: 317 RFNGDKRIFCFILSTRSGGVGINLT-GADTVIFYDSDWNPTMDAQAQDRC-----HRIGQ 370 Query: 162 KRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 R V +Y L+++ TI+ +L++ K + D+ + Sbjct: 371 TRDVHIYRLVSERTIEVNILKKANQKRMLSDMAIEG 406 >gi|322701620|gb|EFY93369.1| SNF2 family helicase/ATPase [Metarhizium acridum CQMa 102] Length = 1677 Score = 96.5 bits (239), Expect = 2e-18, Method: Composition-based stats. Identities = 37/156 (23%), Positives = 63/156 (40%), Gaps = 18/156 (11%) Query: 53 DEKIKALEVIIEKANAAP--IIVAYHFNSDLARLQKAF----------PQGRTLDKDPCT 100 KI+ L I++ A + ++V H L L K F G + K Sbjct: 1164 STKIELLIQILDDAKRSKDKVLVFSHSIPTLNYLSKLFQEQKRCFSRLDGGTPIAKRQDE 1223 Query: 101 IQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 I+++N + L + G GLN+Q G N +V W+ QQ I R + G Sbjct: 1224 IKKFNANQTELYLISTRAGGVGLNIQ-GANKVVILDSKWNPVHEQQAIGR-----SYRIG 1277 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + V VYY + T ++ + R K+ + +++ Sbjct: 1278 QSKPVSVYYFVTAGTFEQDLHGRAIFKTQLATRVVD 1313 >gi|58260984|ref|XP_567902.1| helicase [Cryptococcus neoformans var. neoformans JEC21] gi|57229983|gb|AAW46385.1| helicase, putative [Cryptococcus neoformans var. neoformans JEC21] Length = 926 Score = 96.5 bits (239), Expect = 2e-18, Method: Composition-based stats. Identities = 29/149 (19%), Positives = 59/149 (39%), Gaps = 22/149 (14%) Query: 67 NAAPIIVAYHFNSDLARLQ------KAFPQGRTLDKDPC-----TIQEWNEGK-----IP 110 +++ F + L ++ K + R P + E+N GK Sbjct: 662 KGHRVLLFSQFTTMLDVIEDWATVYKGWKVCRIDGSTPQESRREQMDEFNGGKDDPNACK 721 Query: 111 LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYL 170 L + G G+NL + ++FF W+ + Q R + G + V V+ L Sbjct: 722 LFLLSTRAGGLGINL-VSADTVIFFDQDWNPQMDLQA-----QDRAHRIGQTKPVLVFRL 775 Query: 171 IAQNTIDELVLQRLRTKSTIQDLLLNALK 199 ++ +TI+ +L + K ++ L+++ K Sbjct: 776 VSAHTIESKILAKAGNKRKLEALVISQGK 804 >gi|315053040|ref|XP_003175894.1| chromodomain helicase hrp3 [Arthroderma gypseum CBS 118893] gi|311341209|gb|EFR00412.1| chromodomain helicase hrp3 [Arthroderma gypseum CBS 118893] Length = 1559 Score = 96.5 bits (239), Expect = 2e-18, Method: Composition-based stats. Identities = 31/167 (18%), Positives = 63/167 (37%), Gaps = 22/167 (13%) Query: 36 ANGAVYYDEEKHWKEVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQKAFPQGRT 93 A G+ +++ K+ L+ ++ K + +++ L L R Sbjct: 792 AGGSTRREDQLKALVTSSGKMMVLDQLLTKLKNDGHRVLIFSQMVRMLNILANYM-DARG 850 Query: 94 LDKDPCT-----------IQEWNE-GKIPL-LFAHPASCGHGLNLQYGGNILVFFSLWWD 140 + I+ +N G + G G+NL + ++ F W+ Sbjct: 851 FNYQRLDGTIAAGPRRLAIEHYNAPGSTDFTFLLSTRAGGLGINLMT-ADTVILFDSDWN 909 Query: 141 LEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTK 187 + Q + R + G + V VY L++++T++E VL+R R K Sbjct: 910 PQADLQAMAR-----AHRIGQTKPVSVYRLVSKDTVEEEVLERARNK 951 >gi|297744167|emb|CBI37137.3| unnamed protein product [Vitis vinifera] Length = 1116 Score = 96.5 bits (239), Expect = 2e-18, Method: Composition-based stats. Identities = 31/142 (21%), Positives = 51/142 (35%), Gaps = 17/142 (11%) Query: 65 KANAAPIIVAYHFNSDLARLQ----------KAFPQGRTLDKDPCTIQEWNE-GKIPLLF 113 K +++ L L+ + + I E+N+ + + Sbjct: 727 KEQGHRVLLFAQTQQMLDILENFLIAGGYVYRRMDGFTPIKHRMALIDEFNDSDDVFIFI 786 Query: 114 AHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQ 173 G G NL G N ++ + W+ Q ER + G R V VY LI + Sbjct: 787 LTTKVGGLGTNLT-GANRVIIYDPDWNPSTDMQARERAW-----RIGQTRDVTVYRLITR 840 Query: 174 NTIDELVLQRLRTKSTIQDLLL 195 TI+E V QR K + + +L Sbjct: 841 GTIEEKVYQRQIYKHFLTNKIL 862 >gi|223992919|ref|XP_002286143.1| rad54-like protein [Thalassiosira pseudonana CCMP1335] gi|220977458|gb|EED95784.1| rad54-like protein [Thalassiosira pseudonana CCMP1335] Length = 549 Score = 96.5 bits (239), Expect = 2e-18, Method: Composition-based stats. Identities = 39/179 (21%), Positives = 68/179 (37%), Gaps = 22/179 (12%) Query: 38 GAVYYDEEKHWKEVHDEKIKALEVIIE--KANAAPIIVAYHFNSDLARL-----QKAFPQ 90 G Y DE K++ L I+ I+ + L + ++ + Sbjct: 350 GCFYGDE---RFVEVSGKLQVLAKILPLWHKQGHRFILFCQWRKTLNIIEQFTRKQNWKF 406 Query: 91 GRT-----LDKDPCTIQEWNEGK-IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEH 144 R + + ++N + + + G GLN+ G N +V F W+ + Sbjct: 407 ARLDGNTNVASRQKLVDKFNNDESYFCMLMTTRTGGVGLNVT-GANRVVIFDPDWNPQTD 465 Query: 145 QQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETI 203 Q ER + G K+ V VY LI TI+E + QR K+ I + +L K+ + Sbjct: 466 AQARERAW-----RFGQKKDVTVYRLITAGTIEEKIYQRQIFKTAITNQVLQDPKQRRL 519 >gi|194859366|ref|XP_001969360.1| GG23998 [Drosophila erecta] gi|190661227|gb|EDV58419.1| GG23998 [Drosophila erecta] Length = 847 Score = 96.5 bits (239), Expect = 2e-18, Method: Composition-based stats. Identities = 29/164 (17%), Positives = 64/164 (39%), Gaps = 19/164 (11%) Query: 52 HDEKIKALEVIIEKA--NAAPIIVAYHFNSDLA------RLQK----AFPQGRTLDKDPC 99 K + L+ ++ K +++ F L R++K ++ Sbjct: 653 DSGKFRYLDTLLPKLKEEGHRVLLFSQFTMMLDIVEEYLRIRKFGFCRLDGATAVNVRQD 712 Query: 100 TIQEWNEGK-IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQ 158 I ++N I + + G G+NL ++ + ++ +Q +R + Sbjct: 713 LITDFNGDDSIFVFLLSTKAGGVGINLTAADTCVIH-DIDFNPYNDKQAEDRC-----HR 766 Query: 159 AGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKET 202 G +R V +Y LI+++TI+E +L K ++ + + K E Sbjct: 767 MGQQRPVTIYRLISESTIEEGILMAAEEKLKLEKDITSNEKGEV 810 >gi|149239807|ref|XP_001525779.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL YB-4239] gi|146449902|gb|EDK44158.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL YB-4239] Length = 1139 Score = 96.5 bits (239), Expect = 2e-18, Method: Composition-based stats. Identities = 42/197 (21%), Positives = 65/197 (32%), Gaps = 28/197 (14%) Query: 22 AFNSASKTVKCLQLANGAVY--YDEEKHWKEVHDEKIKA-----------LEVIIEKANA 68 S + ++ N DE + K+ L I E Sbjct: 789 GLTSLALINVFRKICNSPSLLATDEFYQKIATNTFKLSTSSGKIHVLIPLLLEITECKER 848 Query: 69 APIIVAYHFNSDLAR-------LQKAFPQGRTLDK-DPCTIQEWNEGK-IPLLFAHPASC 119 +I Y DL L+ G T + + E+N + I + S Sbjct: 849 TVLISNYTKTLDLLEHVLRKLNLRYTRLDGSTPNNMRNKLVNEFNRNEEIHVFLLSSKSG 908 Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 G G+NL G + L+ F W+ Q + RI + G + F+Y L IDE Sbjct: 909 GMGINL-VGASRLILFDNDWNPSTDLQSLSRI-----HRDGQTKPCFIYRLFTAGCIDEK 962 Query: 180 VLQRLRTKSTIQDLLLN 196 + QR KS + L+ Sbjct: 963 IFQRQLMKSKLSSKFLD 979 >gi|259488679|tpe|CBF88314.1| TPA: SNF2 family helicase/ATPase PasG, putative (AFU_orthologue; AFUA_1G13010) [Aspergillus nidulans FGSC A4] Length = 868 Score = 96.5 bits (239), Expect = 2e-18, Method: Composition-based stats. Identities = 28/168 (16%), Positives = 61/168 (36%), Gaps = 20/168 (11%) Query: 46 KHWKEVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQK-----------AFPQGR 92 K+ L+ +I I++ F + L LQ Sbjct: 618 DETLVTASGKMLLLDRLIPCLLNKGHKILIFSQFKTQLDILQDWATHLRSWNCCRIDGAI 677 Query: 93 TLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERI 151 + I+ +N + + + G G+NL + ++ F W+ ++ Q Sbjct: 678 SQADRQAQIKAFNTDKDYKIFLLSTRAGGQGINL-VAADTVILFDSDWNPQQDLQA---- 732 Query: 152 GVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 R + G + V VY L + T+++ +L++ +K ++ L++ K Sbjct: 733 -QDRAHRIGQTKPVIVYRLATKGTVEQTLLEKADSKRRLERLVIQKGK 779 >gi|327302918|ref|XP_003236151.1| DNA repair protein Rhp26/Rad26 [Trichophyton rubrum CBS 118892] gi|326461493|gb|EGD86946.1| DNA repair protein Rhp26/Rad26 [Trichophyton rubrum CBS 118892] Length = 1225 Score = 96.5 bits (239), Expect = 2e-18, Method: Composition-based stats. Identities = 29/163 (17%), Positives = 59/163 (36%), Gaps = 20/163 (12%) Query: 53 DEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQK-----------AFPQGRTLDKDPC 99 K++ ++ ++E K ++ L L++ + Sbjct: 736 SGKMQVVKSLLELWKDTGHKTLLFAQHRIMLDILERFIGGFNGFNYRRMDGNTPIKVRQS 795 Query: 100 TIQEWNE-GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQ 158 + E+N + + G G+NL G + ++ + W+ Q ER + Sbjct: 796 MVDEFNNDPDLHVFLLTTKVGGLGVNLT-GADRVIIYDPDWNPSTDVQARERAW-----R 849 Query: 159 AGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 G KR V +Y L+ TI+E + R K + + +L K+ Sbjct: 850 LGQKREVTIYRLMTAGTIEEKIYHRQIFKQFLTNKILRDPKQR 892 >gi|52076609|dbj|BAD45511.1| putative RAD26 [Oryza sativa Japonica Group] Length = 789 Score = 96.5 bits (239), Expect = 2e-18, Method: Composition-based stats. Identities = 33/156 (21%), Positives = 58/156 (37%), Gaps = 19/156 (12%) Query: 53 DEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQ----------KAFPQGRTLDKDPCT 100 K+K +E +++ K +++ L ++ + + Sbjct: 314 SGKMKVVEQVLKVWKEQGHRVLLFTQTQQMLDIMENFLTACEYQYRRMDGLTPAKQRMAL 373 Query: 101 IQEWNE-GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQA 159 I E+N +I + G G NL G N ++ + W+ Q ER + Sbjct: 374 IDEFNNTDEIFIFILTTKVGGLGTNLT-GANRIIIYDPDWNPSTDMQARERAW-----RI 427 Query: 160 GFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 G R V VY LI + TI+E V R K + + +L Sbjct: 428 GQTRDVTVYRLITRGTIEEKVYHRQIYKHFLTNKVL 463 >gi|304360695|ref|YP_003856826.1| putative helicase [Clostridium phage phiCTP1] gi|302495554|gb|ADL40334.1| putative helicase [Clostridium phage phiCTP1] Length = 570 Score = 96.5 bits (239), Expect = 2e-18, Method: Composition-based stats. Identities = 39/205 (19%), Positives = 77/205 (37%), Gaps = 20/205 (9%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEV 61 K Y+ + DL + N ++ + Q+ + E + + K+ LE Sbjct: 361 KIYNSVLNSVKDDLDKIT-TSNNPLAQLTRLRQVTDYTGLVSE----RVLESAKLDRLEE 415 Query: 62 IIEK--ANAAPIIVAYHF-------NSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLL 112 +I+ AN I+ ++ L R A+ G+ + D + N+ ++ Sbjct: 416 LIDTINANGKKTIIFSNWEKVTQEVKKRLIRFNPAYITGKVKNIDDEVQKFQNDDSCKII 475 Query: 113 FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIA 172 + G GL L + ++F W+ Q +R + G V + L+ Sbjct: 476 IGTIGAMGTGLTLT-AASYVIFLDEPWNRALKDQAEDR-----AYRIGTNSTVSIITLLC 529 Query: 173 QNTIDELVLQRLRTKSTIQDLLLNA 197 NTID V + ++ K D+L++ Sbjct: 530 NNTIDVKVHELVKQKGQYSDVLVDG 554 >gi|17551114|ref|NP_508736.1| hypothetical protein C52B9.8 [Caenorhabditis elegans] gi|13775404|gb|AAK39219.1| Hypothetical protein C52B9.8 [Caenorhabditis elegans] Length = 1336 Score = 96.5 bits (239), Expect = 2e-18, Method: Composition-based stats. Identities = 44/230 (19%), Positives = 85/230 (36%), Gaps = 45/230 (19%) Query: 3 QYHKFQRELYCDLQGENIEAFNSASKTVK-----CLQLANGAVYYD----------EEKH 47 Y Q+ L D N+ SK+++ +L N ++ + + Sbjct: 619 LYKHMQKGLLLD------GKTNTGSKSLRNTMIHLRKLCNHPFLFENVEESCRNFWDARF 672 Query: 48 WKEVH----DEKIKALEVIIE--KANAAPIIVAYHFNSDLAR---------LQKAFPQGR 92 V K++ L I+ +A +++ + S + +Q G Sbjct: 673 ISAVDLYRVSGKLELLSRILPKLQATGHRVLMFFQMTSMMTIVEDFLAGGTIQYLRLDGS 732 Query: 93 TL-DKDPCTIQEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIE 149 T D+ + ++N + L + G GLNLQ + ++ F W+ + Q Sbjct: 733 TKPDERGALLDKFNAPNSEYFLFMLSTRAGGLGLNLQT-ADTVIIFDSDWNPHQDMQA-- 789 Query: 150 RIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 R + G K V V+ LI N+++E +L R K + + ++ A K Sbjct: 790 ---QDRAHRIGQKAEVRVFRLITANSVEEKILAAARYKLNVDEKVIQAGK 836 >gi|134116877|ref|XP_772665.1| hypothetical protein CNBK0390 [Cryptococcus neoformans var. neoformans B-3501A] gi|50255283|gb|EAL18018.1| hypothetical protein CNBK0390 [Cryptococcus neoformans var. neoformans B-3501A] Length = 926 Score = 96.5 bits (239), Expect = 2e-18, Method: Composition-based stats. Identities = 29/149 (19%), Positives = 59/149 (39%), Gaps = 22/149 (14%) Query: 67 NAAPIIVAYHFNSDLARLQ------KAFPQGRTLDKDPC-----TIQEWNEGK-----IP 110 +++ F + L ++ K + R P + E+N GK Sbjct: 662 KGHRVLLFSQFTTMLDVIEDWATVYKGWKVCRIDGSTPQESRRDQMDEFNGGKDDPNACK 721 Query: 111 LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYL 170 L + G G+NL + ++FF W+ + Q R + G + V V+ L Sbjct: 722 LFLLSTRAGGLGINL-VSADTVIFFDQDWNPQMDLQA-----QDRAHRIGQTKPVLVFRL 775 Query: 171 IAQNTIDELVLQRLRTKSTIQDLLLNALK 199 ++ +TI+ +L + K ++ L+++ K Sbjct: 776 VSAHTIESKILAKAGNKRKLEALVISQGK 804 >gi|58270438|ref|XP_572375.1| transcription activator snf2l1 [Cryptococcus neoformans var. neoformans JEC21] gi|57228633|gb|AAW45068.1| transcription activator snf2l1, putative [Cryptococcus neoformans var. neoformans JEC21] Length = 1096 Score = 96.5 bits (239), Expect = 2e-18, Method: Composition-based stats. Identities = 43/229 (18%), Positives = 88/229 (38%), Gaps = 39/229 (17%) Query: 6 KFQRELYCDLQGENIEAFNSAS--------KTVKCLQL---ANGAVYYD--------EEK 46 + QR+ Y L ++I+A N + +QL N +D Sbjct: 451 EMQRKWYKSLLEKDIDAVNGMTGKKEGKTRLLNIVMQLRKCCNHPYLFDGAEPGPPFTTD 510 Query: 47 HWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARL---------QKAFPQGRTLD 95 + K+ L+ +++ A + +++ + L L Q G T Sbjct: 511 QHLVDNAGKMVILDKLLKSMKAKGSRVLIFSQMSRMLDILEDYCQFRGHQYCRIDGSTAH 570 Query: 96 KDP-CTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIG 152 +D I E+N + + + G G+NL +I+V F W+ + Q ++R Sbjct: 571 EDRIAAIDEYNAPESEKFVFLLTTRAGGLGINL-VTADIVVLFDSDWNPQADLQAMDR-- 627 Query: 153 VTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 + G + V+V+ I Q+ ++E +L+R K + L++ + + Sbjct: 628 ---AHRIGQTKQVYVFRFITQDAVEERILERATQKLKLDQLVIQEGRAQ 673 >gi|327348692|gb|EGE77549.1| SNF2 family helicase/ATPase [Ajellomyces dermatitidis ATCC 18188] Length = 1072 Score = 96.5 bits (239), Expect = 2e-18, Method: Composition-based stats. Identities = 32/168 (19%), Positives = 62/168 (36%), Gaps = 18/168 (10%) Query: 42 YDEEKHWKEVHDEKIKALEVIIEKANAA-PIIVAYHFNSDLARLQKAFPQ-----GRTLD 95 DE + + KI+ L I++K + IV F S L +++ R Sbjct: 823 DDEPETPDHLASTKIRHLMKILKKESGDYKFIVFSFFTSMLNKIEPFLKDSHIGYARYDG 882 Query: 96 KDPCTIQEW------NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIE 149 ++E N K +L + GLNL + +V +W+ +Q I+ Sbjct: 883 AMRNDLREHSLDRLRNSPKTRVLLCSLRAGSLGLNLT-AASRVVILEPFWNPFVEEQAID 941 Query: 150 RIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 R+ + V +Y L + T++E ++ K + + + Sbjct: 942 RV-----HRLNQTVDVKIYKLTIKGTVEERIVDLQERKRELANATIEG 984 >gi|242091593|ref|XP_002441629.1| hypothetical protein SORBIDRAFT_09g030646 [Sorghum bicolor] gi|241946914|gb|EES20059.1| hypothetical protein SORBIDRAFT_09g030646 [Sorghum bicolor] Length = 373 Score = 96.5 bits (239), Expect = 2e-18, Method: Composition-based stats. Identities = 34/175 (19%), Positives = 67/175 (38%), Gaps = 35/175 (20%) Query: 52 HDEKIKALEVII---------------EKANAAPIIVAYHFNSDLARLQK---------- 86 H K+ AL+ I+ +++ + L ++K Sbjct: 124 HSPKLVALQEILHECGIGSEVSSPDASTAVGQHRVLIFAQHKAFLDIIEKDLFQSHMRSV 183 Query: 87 ---AFPQGRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLE 142 +K ++ +N + I +L G GLNL + LVF W+ Sbjct: 184 TYLRLDGSVDPEKRFEIVKAFNSDPTIDVLLLTTHVGGLGLNLT-SADTLVFMEHDWNPM 242 Query: 143 EHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + Q ++R + G ++ V V+ LI + T++E V+ R K ++ + ++NA Sbjct: 243 KDLQAMDR-----AHRLGQRKVVNVHRLIMRGTLEEKVMSLQRFKVSVANAVINA 292 >gi|149633136|ref|XP_001511990.1| PREDICTED: similar to chromodomain helicase DNA binding protein 1-like [Ornithorhynchus anatinus] Length = 819 Score = 96.5 bits (239), Expect = 2e-18, Method: Composition-based stats. Identities = 35/217 (16%), Positives = 81/217 (37%), Gaps = 35/217 (16%) Query: 1 MKQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVH-------- 52 MK F+RE+ G+ ++ N S+ KC+ G Y E + Sbjct: 264 MKDLDAFEREM-----GKKVKLQNILSQLRKCV----GHPYLFEGVEPEPFAIGDHLVEA 314 Query: 53 DEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAFP---------QGRTLDKDPC-T 100 K+ L+ ++ A +++ L LQ G ++ Sbjct: 315 SGKLHLLDKLLAFLYAGGHRVLLFSQMTRMLDVLQDYMDYRGYSYERLDGSVRGEERHLA 374 Query: 101 IQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 I+ + + + + + G G+NL + ++F ++ + Q R+ + G Sbjct: 375 IKNFGQQPVFVFLLSTRAGGVGMNLT-AADTVIFVDSDFNPQNDLQATARV-----HRIG 428 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + V + LI ++T++E++ + +K + + ++ Sbjct: 429 QSKPVKIIRLIGRDTVEEIIYRTAVSKLRLTNAIMEG 465 >gi|308802858|ref|XP_003078742.1| DNA repair protein, SNF2 family (ISS) [Ostreococcus tauri] gi|116057195|emb|CAL51622.1| DNA repair protein, SNF2 family (ISS) [Ostreococcus tauri] Length = 851 Score = 96.5 bits (239), Expect = 2e-18, Method: Composition-based stats. Identities = 27/159 (16%), Positives = 58/159 (36%), Gaps = 19/159 (11%) Query: 53 DEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRT----------LDKDPCT 100 K K L ++E+ +V + L ++ + +D+ Sbjct: 449 SAKSKFLMSMLERFRIEGHRTLVFSQSQATLDIIEANIREANIDFVRIDGKVNVDERDRR 508 Query: 101 IQEWNE-GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQA 159 + ++ IP++ G GL L +++ F W+ Q ++R + Sbjct: 509 VTKFRSQDDIPVMLLTARVGGLGLTLTEATRVII-FDPAWNPTTDNQSVDR-----AYRI 562 Query: 160 GFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNAL 198 G + V VY ++ TI+E V +R K ++ + + Sbjct: 563 GQTKDVVVYRMVTCGTIEEKVYRRQVFKGSLSKACTDGV 601 >gi|327299934|ref|XP_003234660.1| chromodomain helicase [Trichophyton rubrum CBS 118892] gi|326463554|gb|EGD89007.1| chromodomain helicase [Trichophyton rubrum CBS 118892] Length = 1558 Score = 96.5 bits (239), Expect = 2e-18, Method: Composition-based stats. Identities = 31/167 (18%), Positives = 63/167 (37%), Gaps = 22/167 (13%) Query: 36 ANGAVYYDEEKHWKEVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQKAFPQGRT 93 A G+ +++ K+ L+ ++ K + +++ L L R Sbjct: 792 AGGSTRREDQLKALVTSSGKMMVLDQLLTKLKNDGHRVLIFSQMVRMLNILANYM-DARG 850 Query: 94 LDKDPCT-----------IQEWNE-GKIPL-LFAHPASCGHGLNLQYGGNILVFFSLWWD 140 + I+ +N G + G G+NL + ++ F W+ Sbjct: 851 FNYQRLDGTIAAGPRRLAIEHYNAPGSTDFTFLLSTRAGGLGINLMT-ADTVILFDSDWN 909 Query: 141 LEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTK 187 + Q + R + G + V VY L++++T++E VL+R R K Sbjct: 910 PQADLQAMAR-----AHRIGQTKPVSVYRLVSKDTVEEEVLERARNK 951 >gi|134117902|ref|XP_772332.1| hypothetical protein CNBL2000 [Cryptococcus neoformans var. neoformans B-3501A] gi|50254945|gb|EAL17685.1| hypothetical protein CNBL2000 [Cryptococcus neoformans var. neoformans B-3501A] Length = 1096 Score = 96.5 bits (239), Expect = 2e-18, Method: Composition-based stats. Identities = 43/229 (18%), Positives = 88/229 (38%), Gaps = 39/229 (17%) Query: 6 KFQRELYCDLQGENIEAFNSAS--------KTVKCLQL---ANGAVYYD--------EEK 46 + QR+ Y L ++I+A N + +QL N +D Sbjct: 451 EMQRKWYKSLLEKDIDAVNGMTGKKEGKTRLLNIVMQLRKCCNHPYLFDGAEPGPPFTTD 510 Query: 47 HWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARL---------QKAFPQGRTLD 95 + K+ L+ +++ A + +++ + L L Q G T Sbjct: 511 QHLVDNAGKMVILDKLLKSMKAKGSRVLIFSQMSRMLDILEDYCQFRGHQYCRIDGSTAH 570 Query: 96 KDP-CTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIG 152 +D I E+N + + + G G+NL +I+V F W+ + Q ++R Sbjct: 571 EDRIAAIDEYNAPESEKFVFLLTTRAGGLGINL-VTADIVVLFDSDWNPQADLQAMDR-- 627 Query: 153 VTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 + G + V+V+ I Q+ ++E +L+R K + L++ + + Sbjct: 628 ---AHRIGQTKQVYVFRFITQDAVEERILERATQKLKLDQLVIQEGRAQ 673 >gi|225440123|ref|XP_002277489.1| PREDICTED: similar to SNF2 domain-containing protein / helicase domain-containing protein / RING finger domain-containing protein [Vitis vinifera] Length = 874 Score = 96.5 bits (239), Expect = 2e-18, Method: Composition-based stats. Identities = 32/180 (17%), Positives = 62/180 (34%), Gaps = 26/180 (14%) Query: 42 YDEEKHWKEVHDEKIKALEVIIEKANAA----PIIVAYHFNSDLARLQKAFPQGRTL--- 94 + E E K+ L + + +V F L L++ Sbjct: 688 DNSEIPSSECTSSKVLTLLKFLSASRDQNPSTKSVVFSQFRKMLLLLEQPLKAAGFKTLR 747 Query: 95 -------DKDPCTIQEWNEGKI---PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEH 144 + I+E+ +L A + G G+NL + + WW+ Sbjct: 748 LDGSMNAKRRAQVIEEFGAPGPNGPTVLLASLKASGAGINLT-AASRVYLLEPWWNPAVE 806 Query: 145 QQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIH 204 +Q ++R+ + G K V + LIA+N+I+E +L+ K + A + + Sbjct: 807 EQAMDRV-----HRIGQKEDVKIVRLIARNSIEERILELQERKKKLAK---EAFGRRGLK 858 >gi|326471229|gb|EGD95238.1| DNA repair and recombination protein RAD26 [Trichophyton tonsurans CBS 112818] Length = 1225 Score = 96.5 bits (239), Expect = 2e-18, Method: Composition-based stats. Identities = 29/163 (17%), Positives = 59/163 (36%), Gaps = 20/163 (12%) Query: 53 DEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQK-----------AFPQGRTLDKDPC 99 K++ ++ ++E K ++ L L++ + Sbjct: 736 SGKMQVVKSLLELWKDTGHKTLLFAQHRIMLDILERFIRGFDGFNYRRMDGNTPIKVRQS 795 Query: 100 TIQEWNE-GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQ 158 + E+N + + G G+NL G + ++ + W+ Q ER + Sbjct: 796 MVDEFNNDPDLHVFLLTTKVGGLGVNLT-GADRVIIYDPDWNPSTDVQARERAW-----R 849 Query: 159 AGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 G KR V +Y L+ TI+E + R K + + +L K+ Sbjct: 850 LGQKREVTIYRLMTAGTIEEKIYHRQIFKQFLTNKILRDPKQR 892 >gi|302307844|ref|NP_984605.2| AEL256Cp [Ashbya gossypii ATCC 10895] gi|299789196|gb|AAS52429.2| AEL256Cp [Ashbya gossypii ATCC 10895] Length = 1866 Score = 96.5 bits (239), Expect = 2e-18, Method: Composition-based stats. Identities = 33/181 (18%), Positives = 68/181 (37%), Gaps = 28/181 (15%) Query: 30 VKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQ---- 85 ++ L L G D +++ + E +I + ++ L ++ Sbjct: 1621 LRNLLLECGIGVQDVDQNSISLPSS-----ENVISQ---HRALIFCQLKDMLDMIENDLF 1672 Query: 86 --------KAFPQGRTLDKDPC-TIQEWNE-GKIPLLFAHPASCGHGLNLQYGGNILVFF 135 G +D ++++NE I L G GLNL G + ++F Sbjct: 1673 KKYLPSVTYMRLDGSVESRDRQKVVRKFNEDPSIDCLLLTTKVGGLGLNLT-GADTVIFI 1731 Query: 136 SLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 W+ Q ++R + G K+ V VY +I + +++E ++ + K I ++ Sbjct: 1732 EHDWNPMNDLQAMDR-----AHRLGQKKVVNVYRIITKGSLEEKIMGLQKFKMNIASTVV 1786 Query: 196 N 196 N Sbjct: 1787 N 1787 >gi|321264716|ref|XP_003197075.1| chromatin remodelling complex ATPase chain [Cryptococcus gattii WM276] gi|317463553|gb|ADV25288.1| Chromatin remodelling complex ATPase chain, putative [Cryptococcus gattii WM276] Length = 1096 Score = 96.5 bits (239), Expect = 2e-18, Method: Composition-based stats. Identities = 43/229 (18%), Positives = 88/229 (38%), Gaps = 39/229 (17%) Query: 6 KFQRELYCDLQGENIEAFNSAS--------KTVKCLQL---ANGAVYYD--------EEK 46 + QR+ Y L ++I+A N + +QL N +D Sbjct: 451 EMQRKWYKSLLEKDIDAVNGMTGKKEGKTRLLNIVMQLRKCCNHPYLFDGAEPGPPFTTD 510 Query: 47 HWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARL---------QKAFPQGRTLD 95 + K+ L+ +++ A + +++ + L L Q G T Sbjct: 511 QHLVDNAGKMLILDKLLKSMKAKGSRVLIFSQMSRMLDILEDYCQFRGHQYCRIDGSTAH 570 Query: 96 KDP-CTIQEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIG 152 +D I E+N + + + G G+NL +I+V F W+ + Q ++R Sbjct: 571 EDRIAAIDEYNAPGSEKFVFLLTTRAGGLGINL-VTADIVVLFDSDWNPQADLQAMDR-- 627 Query: 153 VTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 + G + V+V+ I Q+ ++E +L+R K + L++ + + Sbjct: 628 ---AHRIGQTKQVYVFRFITQDAVEERILERATQKLKLDQLVIQEGRAQ 673 >gi|241950577|ref|XP_002418011.1| DNA repair protein, putative [Candida dubliniensis CD36] gi|223641350|emb|CAX43310.1| DNA repair protein, putative [Candida dubliniensis CD36] Length = 1088 Score = 96.5 bits (239), Expect = 2e-18, Method: Composition-based stats. Identities = 35/159 (22%), Positives = 58/159 (36%), Gaps = 26/159 (16%) Query: 52 HDEKIKALEVIIEKAN----AAPIIVAYHFNSDLARLQKAFPQGRT------------LD 95 KI+AL ++ + + +IV F+S L + ++ Sbjct: 911 SSSKIQALIRHLKALHSQSPNSKVIVFSQFSSYLDIIHSELKLASEDFIVFKFDGRLNMN 970 Query: 96 KDPCTIQEWN----EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERI 151 ++ +N GKI +L +CG GLNL + WW Q I+RI Sbjct: 971 DRTKLLESFNQPLDNGKIAILLLSLKACGVGLNLTT-ASRAYMMDPWWSPSIEDQAIDRI 1029 Query: 152 GVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 + G V V I +N+I+ +L+ K I Sbjct: 1030 -----HRIGQNETVKVVRFIMENSIETKMLKIQERKKQI 1063 >gi|74197316|dbj|BAC37509.2| unnamed protein product [Mus musculus] Length = 378 Score = 96.5 bits (239), Expect = 2e-18, Method: Composition-based stats. Identities = 40/229 (17%), Positives = 86/229 (37%), Gaps = 39/229 (17%) Query: 1 MKQY---HKFQRELYCDLQGENIEAFNSASKTVK------CLQL--ANGAVYYDEEKHW- 48 +K Y K QRE Y + ++I+ NSA K K +QL Y + Sbjct: 55 VKIYVGLSKMQREWYTRILIKDIDILNSAGKMDKMRLLNILMQLRKCCNHPYLFDGAEPG 114 Query: 49 --------KEVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQ---------KAFP 89 + K+ L+ ++ K + +++ L L+ Sbjct: 115 PLFTTDMHLVTNSGKMVVLDKLLPKLKEQGSRVLIFSQMTRVLDILEDYCMWRNYEYCRL 174 Query: 90 QGRTLDKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQM 147 +T + +I +NE + + G G+NL ++++ + W+ + Q Sbjct: 175 DEQTPHERQDSINAYNEPNSTKFVFMLSTRAGGLGINL-ATADVVILYDSDWNPQVDLQA 233 Query: 148 IERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 ++ + G ++ V V+ I NT++E +++R K + +++ Sbjct: 234 MD-----YAHRIGQRKTVRVFRFITDNTVEERIVERAEMKLRLDSIVIQ 277 >gi|209945960|gb|ACI97211.1| okra [Drosophila melanogaster] Length = 168 Score = 96.5 bits (239), Expect = 2e-18, Method: Composition-based stats. Identities = 29/143 (20%), Positives = 57/143 (39%), Gaps = 19/143 (13%) Query: 58 ALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGR----------TLDKDPCTIQEWNEG 107 L I + N +++ ++ L ++ + + ++ K + +N+ Sbjct: 33 MLAAIRAEGNDKVVLI-SNYTQTLDLFEQLARKRKYGFVRLDGTMSIKKRSKVVDRFNDP 91 Query: 108 KIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 + L + G GLNL G N L F W+ +Q + R+ + G K+ Sbjct: 92 ESDSFLFMLSSKAGGCGLNL-IGANRLFMFDPDWNPANDEQAMARVW-----RDGQKKPC 145 Query: 166 FVYYLIAQNTIDELVLQRLRTKS 188 ++Y L+A +I+E QR K Sbjct: 146 YIYRLVASGSIEEKXXQRQTHKK 168 >gi|323449633|gb|EGB05519.1| hypothetical protein AURANDRAFT_30762 [Aureococcus anophagefferens] Length = 603 Score = 96.5 bits (239), Expect = 2e-18, Method: Composition-based stats. Identities = 31/148 (20%), Positives = 60/148 (40%), Gaps = 22/148 (14%) Query: 64 EKANAAPIIVAYHFNSDLARLQK--------------AFPQGRTLDKDPCTIQEWN--EG 107 +KA + +++ F L L++ + ++ +N E Sbjct: 462 KKAAGSRVLLFSQFTLTLDVLEEYCAAHHGDRGVGYLRLDGATGRIQREMDMRSFNASES 521 Query: 108 KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFV 167 KI L + G G+NL + +V + W+ + Q ++R + G + V V Sbjct: 522 KIFLYLISTRAGGQGINL-ATADTVVLYDTCWNPQVDLQAMDR-----AHRIGQRGQVTV 575 Query: 168 YYLIAQNTIDELVLQRLRTKSTIQDLLL 195 Y LIA++T++E V R K + L++ Sbjct: 576 YRLIARDTVEEKVHARAHQKLLLDALVM 603 >gi|254577371|ref|XP_002494672.1| ZYRO0A06996p [Zygosaccharomyces rouxii] gi|238937561|emb|CAR25739.1| ZYRO0A06996p [Zygosaccharomyces rouxii] Length = 1529 Score = 96.2 bits (238), Expect = 2e-18, Method: Composition-based stats. Identities = 37/210 (17%), Positives = 88/210 (41%), Gaps = 29/210 (13%) Query: 9 RELYCDLQGEN-IEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDE--------KIKAL 59 REL L N +++++ A + + N +++ + K D+ K++ L Sbjct: 1199 RELSLGLNETNSVDSYSQAQLLSQFQSMTN-PLHHLQTKLAIAFPDKSLLQYDCGKLQKL 1257 Query: 60 EVIIE--KANAAPIIVAYHFNSDLARLQKAF---------PQGRTLDKDPCTI-QEWN-E 106 ++++ K + ++ L L++ G T +D + + +N + Sbjct: 1258 AILLQNLKDHGHRALIFTQMTKVLDVLEQFLNYHGYLYMRLDGATKIEDRQVLTERFNTD 1317 Query: 107 GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVF 166 +I S G G+NL G + ++F+ W+ +Q +R + G R V Sbjct: 1318 PRITAFILSSRSGGLGINLT-GADTVIFYDSDWNPAMDKQCQDRC-----HRIGQTRDVH 1371 Query: 167 VYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 +Y ++ +TI+ +L++ K + ++++ Sbjct: 1372 IYRFVSDHTIESNILKKANQKRQLDNVVIQ 1401 >gi|219362507|ref|NP_001136611.1| hypothetical protein LOC100216734 [Zea mays] gi|194696362|gb|ACF82265.1| unknown [Zea mays] Length = 356 Score = 96.2 bits (238), Expect = 2e-18, Method: Composition-based stats. Identities = 23/135 (17%), Positives = 54/135 (40%), Gaps = 17/135 (12%) Query: 70 PIIVAYHFNSDLARLQ----------KAFPQGRTLDKDPCTIQEWN-EGKIPLLFAHPAS 118 IV + L L+ + +L+ ++++N + ++ ++ + Sbjct: 203 KAIVFSQWTGMLDLLELSLNINCIQYRRLDGTMSLNLREKNVKDFNTDPEVRVMIMSLKA 262 Query: 119 CGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDE 178 GLN+ + ++ LWW+ Q ++R + G R V V L ++T+++ Sbjct: 263 GNLGLNMVSACH-VILLDLWWNPYAEDQAVDR-----AHRIGQTRPVTVSRLTVKDTVED 316 Query: 179 LVLQRLRTKSTIQDL 193 +L K T+ + Sbjct: 317 RILALQEEKRTMVNS 331 >gi|115389418|ref|XP_001212214.1| hypothetical protein ATEG_03036 [Aspergillus terreus NIH2624] gi|114194610|gb|EAU36310.1| hypothetical protein ATEG_03036 [Aspergillus terreus NIH2624] Length = 1896 Score = 96.2 bits (238), Expect = 2e-18, Method: Composition-based stats. Identities = 33/163 (20%), Positives = 65/163 (39%), Gaps = 18/163 (11%) Query: 35 LANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTL 94 L GA Y + ++K + I++ ++ + F G Sbjct: 1667 LGTGASYVSPHRALVF---CQMKEMLDIVQSEVLKKLLPSVQFL--------RLDGGVEA 1715 Query: 95 DKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGV 153 + + +N + +L + G GLNL G + ++F W+ ++ Q ++R Sbjct: 1716 TRRQDIVNRFNTDPSYDVLLLTTSVGGLGLNLT-GADTVIFVEHDWNPQKDIQAMDR--- 1771 Query: 154 TRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + G K+ V VY LI + T++E +L R K + ++N Sbjct: 1772 --AHRIGQKKVVNVYRLITRGTLEEKILNLQRFKIDVASTVVN 1812 >gi|68072323|ref|XP_678075.1| DNA repair protein rad54 [Plasmodium berghei strain ANKA] gi|56498427|emb|CAH96805.1| DNA repair protein rad54, putative [Plasmodium berghei] Length = 860 Score = 96.2 bits (238), Expect = 2e-18, Method: Composition-based stats. Identities = 36/195 (18%), Positives = 76/195 (38%), Gaps = 24/195 (12%) Query: 4 YHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHD--EKIKALEV 61 Y K ++L + + + + + S + L + ++ V + + + +E+ Sbjct: 516 YDKSVKKLIEECKRDVYRCYYNLSSKFQLLHFLLKTIKHETNDKVVIVSNYTQTLDYMEI 575 Query: 62 IIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEW-NEGKIPLLFAHPASCG 120 + ++ + Y F G ++ K I ++ N I + S G Sbjct: 576 LCKENH-------YKFV--------RLDGGISIKKRHKVISDFTNTDDIFIFLLSSKSGG 620 Query: 121 HGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELV 180 G+NL N L+ W+ +Q + R+ + G K+ ++Y L TIDE V Sbjct: 621 CGINL-ISSNRLILLDPDWNPANDKQALARVW-----REGQKKICYIYRLFCTGTIDEKV 674 Query: 181 LQRLRTKSTIQDLLL 195 QR +K + +++ Sbjct: 675 YQRQISKDGLSSMIV 689 >gi|328862898|gb|EGG11998.1| hypothetical protein MELLADRAFT_76519 [Melampsora larici-populina 98AG31] Length = 779 Score = 96.2 bits (238), Expect = 2e-18, Method: Composition-based stats. Identities = 34/172 (19%), Positives = 64/172 (37%), Gaps = 21/172 (12%) Query: 44 EEKHWKEVHDEKIKALEVIIEKANAAP--IIVAYHFNSDLARLQ----------KAFPQG 91 E + ++ L+ I +++ P IV F S L ++ + Sbjct: 599 EGMNASTKISRLLELLDEIASESSEKPKKTIVFSQFTSFLDLIEPFIKKAKHGYARYDGA 658 Query: 92 RTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 +T D+ + + + K +L GLNL + +V WW+ Q +R Sbjct: 659 KTADEKAEALNKIKHDPKCTVLLISLRCGSVGLNL-ICCSRVVLMDPWWNPSIESQAFDR 717 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL--NALKK 200 + G + V Y + +TI++ +L+ K +I + L A KK Sbjct: 718 -----AHRFGQRDDVKCYKITIADTIEDRILKLQEDKQSIANQALGTEAAKK 764 >gi|326476226|gb|EGE00236.1| chromodomain helicase [Trichophyton tonsurans CBS 112818] Length = 1558 Score = 96.2 bits (238), Expect = 2e-18, Method: Composition-based stats. Identities = 31/167 (18%), Positives = 63/167 (37%), Gaps = 22/167 (13%) Query: 36 ANGAVYYDEEKHWKEVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQKAFPQGRT 93 A G+ +++ K+ L+ ++ K + +++ L L R Sbjct: 792 AGGSTRREDQLKALVTSSGKMMVLDQLLTKLKNDGHRVLIFSQMVRMLNILANYM-DARG 850 Query: 94 LDKDPCT-----------IQEWNE-GKIPL-LFAHPASCGHGLNLQYGGNILVFFSLWWD 140 + I+ +N G + G G+NL + ++ F W+ Sbjct: 851 FNYQRLDGTIAAGPRRLAIEHYNAPGSTDFTFLLSTRAGGLGINLMT-ADTVILFDSDWN 909 Query: 141 LEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTK 187 + Q + R + G + V VY L++++T++E VL+R R K Sbjct: 910 PQADLQAMAR-----AHRIGQTKPVSVYRLVSKDTVEEEVLERARNK 951 >gi|322701606|gb|EFY93355.1| SNF2-family ATP dependent chromatin remodeling factor snf21 [Metarhizium acridum CQMa 102] Length = 1416 Score = 96.2 bits (238), Expect = 2e-18, Method: Composition-based stats. Identities = 39/225 (17%), Positives = 83/225 (36%), Gaps = 33/225 (14%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQL---ANGAVYYDEEKHWKEVHD----- 53 K Y + + N+ + +QL N +DE ++ Sbjct: 783 KLYKQMVTHNKLVVSDGKGGKTNARGLSNMIMQLRKLCNHPFVFDEVENVMNPMSISNDL 842 Query: 54 -----EKIKALEVIIE--KANAAPIIVAYHFNSDLARLQ---------KAFPQGRTL-DK 96 K + L+ I+ +A +++ + + + ++ G T D+ Sbjct: 843 LWRTAGKFELLDRILPKYQATGHRVLMFFQMTAIMDIMEDYLRYRKFEYLRLDGTTKSDE 902 Query: 97 DPCTIQEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 ++E+N K + + G GLNLQ + ++ + W+ + Q Sbjct: 903 RSDLLKEFNAPDSKYFMFLLSTRAGGLGLNLQT-ADTVIIYDSDWNPHQDLQA-----QD 956 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 R + G K V + LI+ N+++E +L+R R K + ++ A + Sbjct: 957 RAHRIGQKNEVRILRLISSNSVEEKILERARFKLDMDGKVIQAGR 1001 >gi|298710164|emb|CBJ31874.1| Probable chromatin remodelling complex ATPase chain [Ectocarpus siliculosus] Length = 1485 Score = 96.2 bits (238), Expect = 2e-18, Method: Composition-based stats. Identities = 27/141 (19%), Positives = 57/141 (40%), Gaps = 18/141 (12%) Query: 68 AAPIIVAYHFNSDLA---------RLQKAFPQGRTLDKDPCT-IQEWNEGKIP--LLFAH 115 +++ L R + G T + I +N+ + Sbjct: 585 GHRVLIFTQMTKMLDIFEDFCVMRRYEYCRIDGNTSYESREDCIDAYNKPDSTKFVFMLS 644 Query: 116 PASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNT 175 + G G+NLQ + ++ + W+ + Q ++R + G KR V VY L+ +NT Sbjct: 645 TRAGGLGINLQT-ADTVILYDSDWNPQADLQAMDR-----AHRIGQKRPVSVYRLVTENT 698 Query: 176 IDELVLQRLRTKSTIQDLLLN 196 ++E V++R + K + +++ Sbjct: 699 VEEKVVERAQQKLKLDAMIVQ 719 >gi|146161298|ref|XP_977122.2| SNF2 family N-terminal domain containing protein [Tetrahymena thermophila] gi|146146801|gb|EAR86636.2| SNF2 family N-terminal domain containing protein [Tetrahymena thermophila SB210] Length = 1540 Score = 96.2 bits (238), Expect = 2e-18, Method: Composition-based stats. Identities = 37/166 (22%), Positives = 65/166 (39%), Gaps = 19/166 (11%) Query: 49 KEVHDEKIKALEVIIEKANAA--PIIVAYHF--NSDLARL---QKAFPQGRT-----LDK 96 K + KI A+ I+ +V F DL + + P R + Sbjct: 1365 KYIRSSKINAVMNYIQNLQKTDDKCLVFTQFLGMMDLFEIDFQKNKIPYLRLDGSVNQKQ 1424 Query: 97 DPCTIQEWNEG-KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTR 155 I+ +NE + + + G GLNL N ++ WW+ +Q IER Sbjct: 1425 RAEIIKRFNEDSQYKVFMISLKAGGVGLNL-VKANHVLMVDPWWNPAVEEQAIERC---- 1479 Query: 156 QRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 + G K+ VFV I ++I+ +++ K + + + A KK+ Sbjct: 1480 -HRIGQKKEVFVTRFICDDSIESRMIKLHEEKRDLFENTIQATKKD 1524 >gi|326480845|gb|EGE04855.1| chromodomain helicase hrp3 [Trichophyton equinum CBS 127.97] Length = 1558 Score = 96.2 bits (238), Expect = 2e-18, Method: Composition-based stats. Identities = 31/167 (18%), Positives = 63/167 (37%), Gaps = 22/167 (13%) Query: 36 ANGAVYYDEEKHWKEVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQKAFPQGRT 93 A G+ +++ K+ L+ ++ K + +++ L L R Sbjct: 792 AGGSTRREDQLKALVTSSGKMMVLDQLLTKLKNDGHRVLIFSQMVRMLNILANYM-DARG 850 Query: 94 LDKDPCT-----------IQEWNE-GKIPL-LFAHPASCGHGLNLQYGGNILVFFSLWWD 140 + I+ +N G + G G+NL + ++ F W+ Sbjct: 851 FNYQRLDGTIAAGPRRLAIEHYNAPGSTDFTFLLSTRAGGLGINLMT-ADTVILFDSDWN 909 Query: 141 LEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTK 187 + Q + R + G + V VY L++++T++E VL+R R K Sbjct: 910 PQADLQAMAR-----AHRIGQTKPVSVYRLVSKDTVEEEVLERARNK 951 >gi|330936688|ref|XP_003305493.1| hypothetical protein PTT_18347 [Pyrenophora teres f. teres 0-1] gi|311317475|gb|EFQ86421.1| hypothetical protein PTT_18347 [Pyrenophora teres f. teres 0-1] Length = 890 Score = 96.2 bits (238), Expect = 2e-18, Method: Composition-based stats. Identities = 31/163 (19%), Positives = 63/163 (38%), Gaps = 26/163 (15%) Query: 52 HDEKIKALEVIIEK---ANAAPIIVAYHFNSDLARLQK----------AFPQGRTLDKDP 98 K++ L+ ++ + I++ ++ + L +++ K Sbjct: 579 SSAKLRLLDSLVHRIYTTTEEKIVIVSNYTTTLDMIERLLVSLSYTYLRLDGSTPASKRQ 638 Query: 99 CTIQEWNEGKIP-----LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGV 153 ++++N K P S G GLNL G + +V F + W+ Q + RI Sbjct: 639 ALVEKFN--KTPKTTSFAFLLSAKSGGVGLNL-IGASRIVLFDIDWNPATDLQAMARI-- 693 Query: 154 TRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + G K VY + Q +DE + QR K + + +++ Sbjct: 694 ---HRDGQKLPCKVYRFLVQGGLDEKIYQRQIMKMGLANAVVD 733 >gi|189209013|ref|XP_001940839.1| DNA repair and recombination protein RAD26 [Pyrenophora tritici-repentis Pt-1C-BFP] gi|187976932|gb|EDU43558.1| DNA repair and recombination protein RAD26 [Pyrenophora tritici-repentis Pt-1C-BFP] Length = 893 Score = 96.2 bits (238), Expect = 2e-18, Method: Composition-based stats. Identities = 31/163 (19%), Positives = 63/163 (38%), Gaps = 26/163 (15%) Query: 52 HDEKIKALEVIIEK---ANAAPIIVAYHFNSDLARLQK----------AFPQGRTLDKDP 98 K++ L+ ++ + I++ ++ + L +++ K Sbjct: 582 SSAKLRLLDSLVHRIYTTTEEKIVIVSNYTTTLDMIERLLVSLSYTYLRLDGSTPASKRQ 641 Query: 99 CTIQEWNEGKIP-----LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGV 153 ++++N K P S G GLNL G + +V F + W+ Q + RI Sbjct: 642 ALVEKFN--KTPKTTSFAFLLSAKSGGVGLNL-IGASRIVLFDIDWNPATDLQAMARI-- 696 Query: 154 TRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + G K VY + Q +DE + QR K + + +++ Sbjct: 697 ---HRDGQKLPCKVYRFLVQGGLDEKIYQRQIMKMGLANAVVD 736 >gi|119173796|ref|XP_001239291.1| hypothetical protein CIMG_10313 [Coccidioides immitis RS] Length = 1520 Score = 96.2 bits (238), Expect = 2e-18, Method: Composition-based stats. Identities = 27/176 (15%), Positives = 60/176 (34%), Gaps = 33/176 (18%) Query: 39 AVYYDEEKHWKEVHDEKIKALEVIIEKA---------------NAAPIIVAYHFNSDLAR 83 ++ + E + + AL +I + + +++ L Sbjct: 748 FMFANAEDRILQGSTRREDALRALITSSGKMMLLDQLLAKLKNDGHRVLIFSQMVRMLDI 807 Query: 84 LQKAFPQGRTLDKD----------PCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNI 131 L + +I+ +N + G G+NL + Sbjct: 808 LADYMDARGFAYQRLDGTIAAGPRRLSIEHFNAPDSTDFAFLLSTRAGGLGINLMT-ADT 866 Query: 132 LVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTK 187 ++ F W+ + Q + R + G + V VY L++++T++E V++R R K Sbjct: 867 VILFDSDWNPQADLQAMAR-----AHRIGQTKPVSVYRLVSKDTVEEEVIERARNK 917 >gi|190347873|gb|EDK40225.2| hypothetical protein PGUG_04323 [Meyerozyma guilliermondii ATCC 6260] Length = 1367 Score = 96.2 bits (238), Expect = 2e-18, Method: Composition-based stats. Identities = 28/159 (17%), Positives = 61/159 (38%), Gaps = 20/159 (12%) Query: 52 HDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARL----------QKAFPQGRTLDKDPC 99 K+ LE ++ + +++ L L + G + Sbjct: 641 SSGKMVLLEQLLTRLRKEGHRVLIFSQMVRMLDILGDYLSIKGYAFQRLDGGIPSSQRRI 700 Query: 100 TIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 +I +N + + G G+NL + ++ F W+ + Q + R Sbjct: 701 SIDHFNAPDSRDFVFLLSTRAGGLGINLMT-ADTVIIFDSDWNPQADLQAMAR-----AH 754 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + G K V VY ++++TI+E +L+R R K ++ +++ Sbjct: 755 RIGQKNHVSVYRFVSKDTIEEEILERARKKMILEYAIIS 793 >gi|115744408|ref|XP_793154.2| PREDICTED: similar to Chromodomain helicase DNA binding protein 1-like, partial [Strongylocentrotus purpuratus] gi|115954708|ref|XP_001193945.1| PREDICTED: similar to Chromodomain helicase DNA binding protein 1-like, partial [Strongylocentrotus purpuratus] Length = 852 Score = 96.2 bits (238), Expect = 2e-18, Method: Composition-based stats. Identities = 34/196 (17%), Positives = 68/196 (34%), Gaps = 29/196 (14%) Query: 27 SKTVKCLQL---ANGAVYYD-------EEKHWKEVHDEKIKALEVIIEKA--NAAPIIVA 74 S +QL N +D E K+ L+ ++ +++ Sbjct: 272 SLMNTLMQLRKCVNHPYIFDGVEPEPFELGEHLVDCSGKLHLLDKLLMSLWQQGHKVLLF 331 Query: 75 YHFNSDLARLQKAF---------PQGRTLDKDP-CTIQEWN-EGKIPLLFAHPASCGHGL 123 L LQ G ++ ++ +N + + G GL Sbjct: 332 SQMTRMLDILQDYLGFRGYEYERLDGSVRGEERYLAVKNFNQRDDTFVFLLSTKAGGQGL 391 Query: 124 NLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQR 183 NL G + ++F ++ + Q R + G R V + LI +++++EL+LQR Sbjct: 392 NL-VGADTVIFVDSDYNPQNDLQAAAR-----AHRIGQTRPVKIIRLIGRDSVEELILQR 445 Query: 184 LRTKSTIQDLLLNALK 199 K + + ++ K Sbjct: 446 ADEKLKLTNDVIEGGK 461 >gi|312383001|gb|EFR28245.1| hypothetical protein AND_04056 [Anopheles darlingi] Length = 1726 Score = 96.2 bits (238), Expect = 2e-18, Method: Composition-based stats. Identities = 21/159 (13%), Positives = 60/159 (37%), Gaps = 19/159 (11%) Query: 51 VHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFP---------QGRTLDKDPC 99 K + L+ ++ + A+ +++ F L +++ G T D Sbjct: 577 TSSGKFRKLDELLPQLKADGHRVLIFSQFTMMLDIMERYLKIRKHGYLRLDGSTAVTDRQ 636 Query: 100 TIQEWN--EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 + + + + + + G G+NL +++ + ++ R Sbjct: 637 ELIDQYTSDPNLFVFLLSTKAGGLGINLTAADTVIIHD------IDFNPYNDKQAEDRAH 690 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + G K+ V +Y I++ +I+E +++ + K ++ + Sbjct: 691 RMGQKKPVTIYKFISEGSIEEGMMEIAQQKLQLEKDVTE 729 >gi|303324465|ref|XP_003072220.1| SNF2 family N-terminal domain containing protein [Coccidioides posadasii C735 delta SOWgp] gi|240111930|gb|EER30075.1| SNF2 family N-terminal domain containing protein [Coccidioides posadasii C735 delta SOWgp] gi|320037260|gb|EFW19198.1| chromodomain helicase hrp1 [Coccidioides posadasii str. Silveira] Length = 1520 Score = 96.2 bits (238), Expect = 2e-18, Method: Composition-based stats. Identities = 27/176 (15%), Positives = 60/176 (34%), Gaps = 33/176 (18%) Query: 39 AVYYDEEKHWKEVHDEKIKALEVIIEKA---------------NAAPIIVAYHFNSDLAR 83 ++ + E + + AL +I + + +++ L Sbjct: 748 FMFANAEDRILQGSTRREDALRALITSSGKMMLLDQLLAKLKNDGHRVLIFSQMVRMLDI 807 Query: 84 LQKAFPQGRTLDKD----------PCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNI 131 L + +I+ +N + G G+NL + Sbjct: 808 LADYMDARGFAYQRLDGTIAAGPRRLSIEHFNAPDSTDFAFLLSTRAGGLGINLMT-ADT 866 Query: 132 LVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTK 187 ++ F W+ + Q + R + G + V VY L++++T++E V++R R K Sbjct: 867 VILFDSDWNPQADLQAMAR-----AHRIGQTKPVSVYRLVSKDTVEEEVIERARNK 917 >gi|255719682|ref|XP_002556121.1| KLTH0H05566p [Lachancea thermotolerans] gi|238942087|emb|CAR30259.1| KLTH0H05566p [Lachancea thermotolerans] Length = 1106 Score = 96.2 bits (238), Expect = 2e-18, Method: Composition-based stats. Identities = 40/223 (17%), Positives = 85/223 (38%), Gaps = 39/223 (17%) Query: 7 FQRELYCDLQGENIEAFNSAS--------KTVKCLQL---ANGAVYYD--------EEKH 47 Q+ Y + ++++A N A+ +QL N +D Sbjct: 376 MQKRWYKQILEKDLDAVNGANGSKESKTRLLNIMMQLRKCCNHPYLFDGAEPGPPYTTDE 435 Query: 48 WKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQ---------KAFPQGRTLDK 96 + K+K L+ ++ K + +++ + L L+ G T + Sbjct: 436 HLVYNSAKLKVLDKLLRKFKEEGSRVLIFSQMSRLLDILEDYCFFRNYEYCRIDGSTAHE 495 Query: 97 DP-CTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGV 153 D I E+N + + G G+NL +++V + W+ + Q ++R Sbjct: 496 DRIEAIDEYNAPDSKKFVFLLTTRAGGLGINLTT-ADVVVLYDSDWNPQADLQAMDR--- 551 Query: 154 TRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + G K+ V V+ L+ N+++E +L+R K + L++ Sbjct: 552 --AHRIGQKKQVKVFRLVTDNSVEEKILERATQKLRLDQLVIQ 592 >gi|222619629|gb|EEE55761.1| hypothetical protein OsJ_04298 [Oryza sativa Japonica Group] Length = 1129 Score = 96.2 bits (238), Expect = 2e-18, Method: Composition-based stats. Identities = 43/207 (20%), Positives = 86/207 (41%), Gaps = 24/207 (11%) Query: 8 QRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKAN 67 QRELY ++ N NSA + L G ++ K++ L ++ + Sbjct: 781 QRELYINILERNYSKLNSAIRNG----LEVGQQATEDVFLSLIASSGKLQLLHKLLPRLK 836 Query: 68 --AAPIIVAYHFNSDLARL---------QKAFPQGRT-LDKDPCTIQEWNE--GKIPLLF 113 +++ L L + A G+T L +I+E+ + + Sbjct: 837 ERGNRVLIFSQMTRMLDILEDFLCSLGYKYARIDGQTSLSARQESIEEYKNIDSETFIFL 896 Query: 114 AHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQ 173 + G G++L G + ++ + ++ Q +R + G R V VY LI + Sbjct: 897 MSTRAGGMGVDL-PGADRVIIYDPDFNPFMDLQA-----QSRAHRIGQTRPVVVYQLITK 950 Query: 174 NTIDELVLQRLRTKSTIQDLLLNALKK 200 +++E +LQ+ + K I+++L+N+ KK Sbjct: 951 CSVEEKILQKSKQKLAIENMLMNSSKK 977 >gi|320587466|gb|EFW99946.1| DNA repair protein rhp26 [Grosmannia clavigera kw1407] Length = 1202 Score = 96.2 bits (238), Expect = 2e-18, Method: Composition-based stats. Identities = 32/128 (25%), Positives = 54/128 (42%), Gaps = 8/128 (6%) Query: 77 FNSDLARLQKAFPQGRTLDKDPCTI--QEWNEGKIPLLFAHPASCGHGLNLQYGGNILVF 134 F L +Q G+T KD T+ + N+ ++ + G G+NL G + ++ Sbjct: 779 FTQSLGDIQYLRMDGKTPIKDRQTLVDRFNNDPQLNVFLLTTKVGGLGVNLT-GADRVII 837 Query: 135 FSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 F W+ Q ER + G KR V +Y L+ TI+E + R K + + + Sbjct: 838 FDPDWNPSTDVQARERAW-----RLGQKRQVTIYRLMTAGTIEEKIYHRQIFKQFLTNKV 892 Query: 195 LNALKKET 202 L K+ Sbjct: 893 LKDPKQRA 900 >gi|170034779|ref|XP_001845250.1| TATA-binding protein-associated factor 172 [Culex quinquefasciatus] gi|167876380|gb|EDS39763.1| TATA-binding protein-associated factor 172 [Culex quinquefasciatus] Length = 1899 Score = 96.2 bits (238), Expect = 2e-18, Method: Composition-based stats. Identities = 30/169 (17%), Positives = 64/169 (37%), Gaps = 30/169 (17%) Query: 52 HDEKIKALEVII--------EKA--NAAPIIVAYHFNSDLARLQK-------------AF 88 H K+ AL+ ++ E N ++ + L ++ Sbjct: 1651 HSAKLPALKQLLLDCGIGTNEDMSVNQHRALIFCQLKAMLDIIENDLLKKHLPAVSYLRL 1710 Query: 89 PQGRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQM 147 G + ++N + I +L G GLNL G + ++F W+ + Q Sbjct: 1711 DGGVPPSSRHQIVTKFNGDPSIDVLLLTTQVGGLGLNLT-GADTVIFVEHDWNPMKDLQA 1769 Query: 148 IERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 ++R + G K+ V VY LI + +++E ++ + K + +++ Sbjct: 1770 MDR-----AHRIGQKKVVNVYRLITRKSLEEKIMGLQKFKLLTANTIVS 1813 >gi|71014727|ref|XP_758754.1| hypothetical protein UM02607.1 [Ustilago maydis 521] gi|46098544|gb|EAK83777.1| hypothetical protein UM02607.1 [Ustilago maydis 521] Length = 1108 Score = 96.2 bits (238), Expect = 2e-18, Method: Composition-based stats. Identities = 39/223 (17%), Positives = 82/223 (36%), Gaps = 39/223 (17%) Query: 6 KFQRELYCDLQGENIEAFNSAS--------KTVKCLQL---ANGAVYYD--------EEK 46 + QR+ Y + ++I+A N +QL N +D Sbjct: 461 EMQRKWYKSILEKDIDAVNGGVGKKEGKTRLLNIVMQLRKCCNHPYLFDGAEPGPPFTTD 520 Query: 47 HWKEVHDEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQK----------AFPQGRTL 94 + K+ L+ ++ K + +++ + L L+ G Sbjct: 521 EHLVDNSGKMVILDRLLHKMKQKGSRVLIFSQMSRMLDILEDYCLFREYKYCRIDGGTAH 580 Query: 95 DKDPCTIQEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIG 152 D I E+N+ + + + G G+NL +I+V F W+ + Q ++R Sbjct: 581 DDRIAAIDEYNKPGSEKFVFLLTTRAGGLGINLTT-ADIVVLFDSDWNPQADLQAMDR-- 637 Query: 153 VTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 + G + V+V+ + ++ I+E +L R K + L++ Sbjct: 638 ---AHRIGQTKQVYVFRFVTEHAIEERILDRAAQKLRLDQLVI 677 >gi|322694140|gb|EFY85978.1| DNA repair protein Rhp26/Rad26, putative [Metarhizium acridum CQMa 102] Length = 1162 Score = 96.2 bits (238), Expect = 2e-18, Method: Composition-based stats. Identities = 31/163 (19%), Positives = 61/163 (37%), Gaps = 20/163 (12%) Query: 53 DEKIKALEVIIEKA---NAAPIIVAYHFNSDLARLQKAF---------PQGRT-LDKDPC 99 K++ + +++K ++ L ++K G T +D+ Sbjct: 728 SAKLELTKDLLQKVMIPKGHKTLLFSQGKLMLNIIEKCMRECNISYLRLDGETPVDQRQP 787 Query: 100 TIQEWNEG-KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQ 158 I +N I + + G G NL G + ++ F W+ Q ER + Sbjct: 788 MIDRFNADLSIHVFLMTTRTGGLGTNLT-GADRIIIFDPDWNPSTDLQARERAW-----R 841 Query: 159 AGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 G + V +Y L+ + TI+E + R K + + +L K+ Sbjct: 842 LGQNKPVKIYRLMTEGTIEEKIYHRQIFKQFMTNKVLKDPKQR 884 >gi|189190262|ref|XP_001931470.1| SNF2 family ATP-dependent chromatin-remodeling factor snf21 [Pyrenophora tritici-repentis Pt-1C-BFP] gi|187973076|gb|EDU40575.1| SNF2 family ATP-dependent chromatin-remodeling factor snf21 [Pyrenophora tritici-repentis Pt-1C-BFP] Length = 1273 Score = 96.2 bits (238), Expect = 2e-18, Method: Composition-based stats. Identities = 41/225 (18%), Positives = 82/225 (36%), Gaps = 33/225 (14%) Query: 2 KQYHKF---QRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHW----KEVHD- 53 K Y + R + D +G ++ ++ +L N ++E + K +D Sbjct: 693 KLYKQLVTHNRLMVSDGKGGKTGMRGLSNMLMQLRKLCNHPFVFEEVEDVMNPTKGTNDL 752 Query: 54 -----EKIKALEVIIE--KANAAPIIVAYH------FNSDLARLQKAF----PQGRTLDK 96 K + L+ I+ +A +++ + D RL+ D Sbjct: 753 LWRAAGKFELLDRILPKFQATGHRVLMFFQMTQIMNIMEDYLRLRGMMYLRLDGATKADD 812 Query: 97 DPCTIQEWNEGKIPLL--FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 ++ +N P + G GLNLQ + ++ + W+ + Q Sbjct: 813 RSDLLRLFNAPDSPYFCFLLSTRAGGLGLNLQT-ADTVIIYDSDWNPHQDLQA-----QD 866 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 R + G K V + LI N+++E +L+R K + ++ A K Sbjct: 867 RAHRIGQKNEVRILRLITSNSVEEKILERANYKLDMDGKVIQAGK 911 >gi|218440726|ref|YP_002379055.1| non-specific serine/threonine protein kinase [Cyanothece sp. PCC 7424] gi|218173454|gb|ACK72187.1| Non-specific serine/threonine protein kinase [Cyanothece sp. PCC 7424] Length = 1048 Score = 96.2 bits (238), Expect = 2e-18, Method: Composition-based stats. Identities = 36/213 (16%), Positives = 69/213 (32%), Gaps = 24/213 (11%) Query: 3 QYHKFQRELYCDLQGENIEAFNSA--SKTVKCLQLANG-AVYYDEEKHWKEVHDEKIKAL 59 Y K + ++ + ++ Q+ N A YY E K+ L Sbjct: 815 LYQKLVDDSLAKIEETTGIQRRGLILTLLMQLKQVCNHPAQYYKENSLDSAQRSGKLLRL 874 Query: 60 EVIIEKAN--AAPIIVAYHFNSDLARLQKAFPQ-----------GRTLDKDPCTIQEWNE 106 E ++E+ ++ F LQ + + I + Sbjct: 875 EEMLEELVDEGDRALIFTQFAEWGKLLQPYLTKKLGRQVLFLYGATPRQQRQEMIDRFQN 934 Query: 107 GKI--PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA 164 P+ + G GLNL N + WW+ Q +R + G K+ Sbjct: 935 DPAAPPIFILSLKAGGTGLNLTR-ANHVFHIDRWWNPAVENQATDR-----AFRIGQKQN 988 Query: 165 VFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 V V+ I T++E + + +K + + ++A Sbjct: 989 VQVHKFICTGTLEEKINDMIESKKQLAEQTVDA 1021 >gi|170089013|ref|XP_001875729.1| SNF2 family DNA-dependent ATPase [Laccaria bicolor S238N-H82] gi|164648989|gb|EDR13231.1| SNF2 family DNA-dependent ATPase [Laccaria bicolor S238N-H82] Length = 1011 Score = 96.2 bits (238), Expect = 2e-18, Method: Composition-based stats. Identities = 39/233 (16%), Positives = 89/233 (38%), Gaps = 45/233 (19%) Query: 6 KFQRELYCDLQGENIEAFNSASKTVK-------------CLQLAN----------GAVYY 42 + QR+ Y + ++I+A N T K ++ G Y Sbjct: 372 EMQRKWYRSVLEKDIDAVNGGCLTGKKEGKTRLMNMVMQLRKVTCHPYLFDGAEPGPPYT 431 Query: 43 DEEKHWKEVHDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQK----------AFPQ 90 +E + + K+ L+ ++ KA + +++ + L L+ Sbjct: 432 TDEHLIQ--NSGKMVILDKLLANMKAKGSRVLIFSQMSRVLDILEDYCLFRQYKYCRIDG 489 Query: 91 GRTLDKDPCTIQEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMI 148 G + I E+N+ + + + G G+NL +I+V + W+ + Q + Sbjct: 490 GTAHEDRIAAIDEYNKPGSERFIFLLTTRAGGLGINLTT-ADIVVLYDSDWNPQADLQAM 548 Query: 149 ERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 +R + G + V+V+ I + +++E +L+R K + L++ + + Sbjct: 549 DR-----AHRIGQTKQVYVFRFITEGSVEERMLERAAQKLRLDQLVIQQGRTQ 596 >gi|115387749|ref|XP_001211380.1| hypothetical protein ATEG_02202 [Aspergillus terreus NIH2624] gi|114195464|gb|EAU37164.1| hypothetical protein ATEG_02202 [Aspergillus terreus NIH2624] Length = 1192 Score = 96.2 bits (238), Expect = 2e-18, Method: Composition-based stats. Identities = 30/163 (18%), Positives = 60/163 (36%), Gaps = 20/163 (12%) Query: 53 DEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQK-----------AFPQGRTLDKDPC 99 K++ + ++E + ++ L L+K + + Sbjct: 730 SGKMQVVRSLLELWRDTGHKTLLFAQHRIMLDILEKFVNSLSGINYRRMDGTTPIAQRQS 789 Query: 100 TIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQ 158 + E+N + + L G G+NL G + ++ + W+ Q ER + Sbjct: 790 MVDEFNKDPSLHLFLLTTKVGGLGVNLT-GADRVIIYDPDWNPSTDMQARERAW-----R 843 Query: 159 AGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 G KR V +Y L+ TI+E + R K + + +L K+ Sbjct: 844 LGQKREVTIYRLMTAGTIEEKIYHRQVFKQFLTNKILRDPKQR 886 >gi|303391164|ref|XP_003073812.1| SNF2 DNA/RNA helicase [Encephalitozoon intestinalis ATCC 50506] gi|303302960|gb|ADM12452.1| SNF2 DNA/RNA helicase [Encephalitozoon intestinalis ATCC 50506] Length = 823 Score = 96.2 bits (238), Expect = 2e-18, Method: Composition-based stats. Identities = 38/171 (22%), Positives = 72/171 (42%), Gaps = 22/171 (12%) Query: 41 YYDEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQ---------KAFP 89 Y ++ KH E + K+ L+ ++E A + +++ + L L+ Sbjct: 341 YTND-KHIIE-NSGKMIVLDKLLESLRARGSRVLIFSQMSMMLDILEDYAMFKEYEYCRI 398 Query: 90 QGRTLDKDPC-TIQEWNE--GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 G T KD I +N + + + G G+NL + ++ F W+ + Q Sbjct: 399 DGSTSYKDRTEAIDAFNAEGSEKFIFLLTTRAGGLGINLST-ADTVILFDSDWNPQMDLQ 457 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 R + G K+ V V+ LI++NT++E ++ R K + D+LL Sbjct: 458 A-----QDRAHRIGQKKQVVVFRLISENTVEERIVYRSLQKLKLDDILLQG 503 >gi|56757896|gb|AAW27088.1| SJCHGC06070 protein [Schistosoma japonicum] Length = 319 Score = 96.2 bits (238), Expect = 2e-18, Method: Composition-based stats. Identities = 24/132 (18%), Positives = 49/132 (37%), Gaps = 16/132 (12%) Query: 66 ANAAPIIVAYHFNSDLARLQK----------AFPQGRTLDKDPCTIQEWNEGKIPLLFAH 115 + I++ F L L++ + + I +N I + Sbjct: 97 SEGHRILIFSQFVIMLDILEEFLRITNRRYIRMDGSTPVSERQTLIDRFNSSSIEVFLLS 156 Query: 116 PASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNT 175 + G G+NL G + ++ + ++ +R R + G K V V LI++ T Sbjct: 157 TRAGGLGINLT-GADTVIIHDIDFN-----PYNDRQAEDRCHRLGQKNPVHVIRLISEGT 210 Query: 176 IDELVLQRLRTK 187 ++E +L+ K Sbjct: 211 LEEGMLRIASEK 222 >gi|167516624|ref|XP_001742653.1| hypothetical protein [Monosiga brevicollis MX1] gi|163779277|gb|EDQ92891.1| predicted protein [Monosiga brevicollis MX1] Length = 649 Score = 96.2 bits (238), Expect = 2e-18, Method: Composition-based stats. Identities = 36/159 (22%), Positives = 62/159 (38%), Gaps = 21/159 (13%) Query: 52 HDEKIKA-LEVI---IEKANAAPIIVAYHFNSDLA----RLQKAFPQGRTLDKD------ 97 KI+A LE + +++ IV F + L RLQ+A + LD Sbjct: 478 SSTKIEAILEELRSGQSASSSIKTIVFSQFTTFLDLLEWRLQRAGIRCVKLDGRMSPQHR 537 Query: 98 PCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 I+ +N + + + G LNL + + WW+ Q ++RI Sbjct: 538 ADVIEAFNTQPHLTAFLISLKAGGLALNL-VSASRCIICDPWWNPATESQAMDRI----- 591 Query: 157 RQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 + G R V V LI +N+I+ + Q K + + + Sbjct: 592 HRLGQNRPVEVIRLIVENSIESRIDQLQEKKRLLFESTV 630 >gi|82705590|ref|XP_727033.1| DNA repair protein RAD54 [Plasmodium yoelii yoelii str. 17XNL] gi|23482686|gb|EAA18598.1| DNA repair protein RAD54-like-related [Plasmodium yoelii yoelii] Length = 1163 Score = 96.2 bits (238), Expect = 2e-18, Method: Composition-based stats. Identities = 31/157 (19%), Positives = 62/157 (39%), Gaps = 20/157 (12%) Query: 53 DEKIKALEVI---IEKANAAPIIVAYHFNSDLARLQ----------KAFPQGRTLDKDPC 99 K + L + I++ +++ ++ L ++ G ++ K Sbjct: 659 SSKFQLLHFLLKTIKQETNDKVVIVSNYTQTLDYMEILCRENYYKFVRLDGGISIKKRHK 718 Query: 100 TIQEW-NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQ 158 I ++ N I + S G G+NL N L+ W+ +Q + R+ + Sbjct: 719 VISDFTNTDDIFIFLLSSKSGGCGINL-ISSNRLILLDPDWNPANDKQALARVW-----R 772 Query: 159 AGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 G K+ ++Y L TIDE V QR +K + +++ Sbjct: 773 EGQKKICYIYRLFCTGTIDEKVYQRQISKDGLSSMIV 809 >gi|312220152|emb|CBY00094.1| similar to DNA repair protein Rhp26/Rad26 [Leptosphaeria maculans] Length = 1224 Score = 96.2 bits (238), Expect = 2e-18, Method: Composition-based stats. Identities = 31/163 (19%), Positives = 60/163 (36%), Gaps = 20/163 (12%) Query: 53 DEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQK-----------AFPQGRTLDKDPC 99 K++ ++ ++ K ++ L LQK + + Sbjct: 756 SGKMQVVKELLSLWKKGGHKTLLFAQHRIMLDILQKFVSHLPGINWRRMDGETPIKERQN 815 Query: 100 TIQEWNE-GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQ 158 + E+N + + G G+NL G N ++ + W+ Q ER + Sbjct: 816 LVDEFNNNPDLDVFLLTTKVGGLGVNLT-GANRVIIYDPDWNPSTDIQARERSW-----R 869 Query: 159 AGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 G KR V +Y L++ TI+E + R K + + +L K+ Sbjct: 870 LGQKREVEIYRLMSAGTIEEKIYHRQIFKQFLTNKVLKDPKQR 912 >gi|294925765|ref|XP_002778999.1| Chromodomain helicase-DNA-binding protein, putative [Perkinsus marinus ATCC 50983] gi|239887845|gb|EER10794.1| Chromodomain helicase-DNA-binding protein, putative [Perkinsus marinus ATCC 50983] Length = 1105 Score = 96.2 bits (238), Expect = 2e-18, Method: Composition-based stats. Identities = 31/172 (18%), Positives = 61/172 (35%), Gaps = 20/172 (11%) Query: 39 AVYYDEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQK---------- 86 D+E + + K+ L+ ++ K A +++ F S L +Q+ Sbjct: 582 CQNKDQEFNRMIMASGKMVLLDKLLPKLHAEGHKVLLFSQFLSMLDLIQRYALYRGYSVE 641 Query: 87 AFPQGRTLDKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEH 144 T I +N + L + G G+NL ++++ F W+ + Sbjct: 642 RLDGSATAKAREEAIDRFNTPESSAFLFLLSTRAGGIGINLT-AADVVIIFDSDWNPQMD 700 Query: 145 QQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 Q R + G + V VY L+ T + + +R K I + + Sbjct: 701 IQATAR-----AHRIGQTKDVKVYRLVTNRTYEAQMFERASQKLGINEAVFQ 747 >gi|70943600|ref|XP_741826.1| hypothetical protein [Plasmodium chabaudi chabaudi] gi|56520453|emb|CAH80960.1| hypothetical protein PC000341.04.0 [Plasmodium chabaudi chabaudi] Length = 154 Score = 96.2 bits (238), Expect = 2e-18, Method: Composition-based stats. Identities = 25/135 (18%), Positives = 52/135 (38%), Gaps = 17/135 (12%) Query: 72 IVAYHFNSDLARLQKAFPQGRTL-----------DKDPCTIQEWNEGKIPLLFAHPASCG 120 ++ + S L ++ + + ++ N+ ++ +L + G Sbjct: 5 LIFSQYCSMLDLIEYHLKKNNIICSKLLGYMSMVSRNNILYNFNNDKQLRVLLISLKAGG 64 Query: 121 HGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELV 180 GLNLQ N + WW+ Q I+R + G + V+ I +NT++E + Sbjct: 65 EGLNLQV-ANRIFIVDPWWNPAAELQAIQR-----AHRIGQTKTVYAIRFIIENTVEEKI 118 Query: 181 LQRLRTKSTIQDLLL 195 +Q K + D + Sbjct: 119 IQLQNKKQLVFDCTI 133 >gi|296813433|ref|XP_002847054.1| DNA repair and recombination protein RAD26 [Arthroderma otae CBS 113480] gi|238842310|gb|EEQ31972.1| DNA repair and recombination protein RAD26 [Arthroderma otae CBS 113480] Length = 1233 Score = 96.2 bits (238), Expect = 2e-18, Method: Composition-based stats. Identities = 28/163 (17%), Positives = 59/163 (36%), Gaps = 20/163 (12%) Query: 53 DEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQK-----------AFPQGRTLDKDPC 99 K++ ++ ++E + ++ L L++ + Sbjct: 736 SGKMQVVKSLLELWRDTGHKTLLFAQHRIMLDILERFIRGFDRFNYRRMDGNTPIKVRQT 795 Query: 100 TIQEWNE-GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQ 158 + E+N + + G G+NL G + ++ + W+ Q ER + Sbjct: 796 MVDEFNNDPSLHVFLLTTKVGGLGVNLT-GADRVIIYDPDWNPSTDVQARERAW-----R 849 Query: 159 AGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 G KR V +Y L+ TI+E + R K + + +L K+ Sbjct: 850 LGQKREVTIYRLMTAGTIEEKIYHRQIFKQFLTNKILRDPKQR 892 >gi|224001126|ref|XP_002290235.1| hypothetical protein THAPSDRAFT_268889 [Thalassiosira pseudonana CCMP1335] gi|220973657|gb|EED91987.1| hypothetical protein THAPSDRAFT_268889 [Thalassiosira pseudonana CCMP1335] Length = 716 Score = 96.2 bits (238), Expect = 2e-18, Method: Composition-based stats. Identities = 33/165 (20%), Positives = 63/165 (38%), Gaps = 27/165 (16%) Query: 52 HDEKIKAL-EVII---EKANAAPIIVAYHFNSDLARLQ----------------KAFPQG 91 KI+AL + ++ + + + IV F + L ++ +A G Sbjct: 538 TSSKIEALTQELVMMRQMSPGSKAIVFSQFTNMLDLIRWRLHSDPYLEDIGLGCRALHGG 597 Query: 92 RTLDKDPCTIQEW-NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 + ++E+ + + +L + G LNL N + WW+ Q I+R Sbjct: 598 MNVKARDICLKEFREDNNVRVLLMSLKAGGVALNLTC-ANYIYLIDPWWNPAAEMQAIDR 656 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 + G R + IA+NT++E +LQ K + D + Sbjct: 657 -----THRLGQYRPIRAIRFIAENTVEERILQLQEKKRLVFDGTI 696 >gi|171915261|ref|ZP_02930731.1| helicase, Snf2 family protein [Verrucomicrobium spinosum DSM 4136] Length = 914 Score = 96.2 bits (238), Expect = 2e-18, Method: Composition-based stats. Identities = 34/176 (19%), Positives = 67/176 (38%), Gaps = 23/176 (13%) Query: 35 LANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAP---IIVAYHFNSDLARLQKAFP-- 89 ++ + Y +++ K+ L ++E +A P II+ + + L ++ Sbjct: 605 MSANSTYLVDKQSP--GFSSKLDRLAELLEALSAEPERKIILFTEWTTMLNLIEPILERL 662 Query: 90 ---------QGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWD 140 Q + + K + + GLNLQ + ++ L W+ Sbjct: 663 KMDFVRLDGQVAQKKRQALVSEFQGNPKCRVFLT-TNAGSTGLNLQ-AADTVINVDLPWN 720 Query: 141 LEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 +Q I R + G KR V V+ L+ + TI+E +L L K + +L+ Sbjct: 721 PALLEQRIAR-----AHRMGQKRKVQVHLLVTEGTIEENLLATLGAKHELASAVLD 771 >gi|313238906|emb|CBY13901.1| unnamed protein product [Oikopleura dioica] Length = 769 Score = 96.2 bits (238), Expect = 2e-18, Method: Composition-based stats. Identities = 35/215 (16%), Positives = 73/215 (33%), Gaps = 23/215 (10%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQL---ANGAVYYDEEKHWKEVHDEKIKA 58 + Y ++ + + + +QL N E K + Sbjct: 226 QLYKHMKQGYMLMDTNDKKNKSGNKALMNTIMQLRKICNHPFITTCEGVPLVRAAGKFEL 285 Query: 59 LEVIIEK--ANAAPIIVAYHFNSDLARLQKAF---------PQGRTL-DKDPCTIQEWN- 105 ++ I+ K A +++ + ++ F G T D ++++N Sbjct: 286 MQRILPKMKATGHKVLIFTQMTQAILLMEDYFNFYGYKYLRLDGSTKADDRGELLKKFNA 345 Query: 106 -EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA 164 + + G GLNLQ + ++ F W+ + Q R + G K Sbjct: 346 VNSDYDVFVLSTRAGGLGLNLQT-ADTVIIFDSDWNPHQDMQA-----QDRAHRIGQKNE 399 Query: 165 VFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 V V + +++E +L R K T+ + ++ A K Sbjct: 400 VRVLRFVTSQSVEERILAAARYKLTVDEKVIQAGK 434 >gi|330840974|ref|XP_003292481.1| hypothetical protein DICPUDRAFT_50468 [Dictyostelium purpureum] gi|325077256|gb|EGC30980.1| hypothetical protein DICPUDRAFT_50468 [Dictyostelium purpureum] Length = 928 Score = 96.2 bits (238), Expect = 2e-18, Method: Composition-based stats. Identities = 35/151 (23%), Positives = 57/151 (37%), Gaps = 18/151 (11%) Query: 59 LEVIIEKANAAPIIVAYHFNSDLARLQ---------KAFPQGRTLD-KDPCTIQEWNEGK 108 L I + + +++ ++ L L G T + K + +N+ K Sbjct: 620 LTKIRDSKSGDKVVIISNYTQTLEVLAIMCKTRGYAYFQLDGSTPNAKRQQLVDLYNDPK 679 Query: 109 IP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVF 166 P + G GLNL GGN LV F W+ Q + R+ + G K+ V Sbjct: 680 RPEFAFLLSSKAGGVGLNL-IGGNHLVLFDADWNPANDAQSMARVW-----REGQKKVVS 733 Query: 167 VYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 +Y TI+E + QR TK + + Sbjct: 734 IYRTFTTGTIEEKIFQRQLTKQALSTSITEG 764 >gi|189235501|ref|XP_969437.2| PREDICTED: similar to lodestar CG2684-PA [Tribolium castaneum] Length = 1103 Score = 96.2 bits (238), Expect = 3e-18, Method: Composition-based stats. Identities = 44/201 (21%), Positives = 77/201 (38%), Gaps = 20/201 (9%) Query: 16 QGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEK--ANAAPIIV 73 + E A N A++ V + + G + E KI+AL +++ + IV Sbjct: 653 EEEPRVAANLANEGVGLKEASKGYLNPTNPVFMTERPSSKIRALINLLKNKISGEDKAIV 712 Query: 74 AYHFNSDLARLQ----------KAFPQGRTLDKDPCTIQEWNEGK--IPLLFAHPASCGH 121 + S L + + + K + +N+ +L + G Sbjct: 713 VSQWTSLLHLVAIHLENEGIPYASLDGSVVVQKRMPIVDNFNDPNSATKVLLLSLTAGGV 772 Query: 122 GLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVL 181 GLNL G N L L W+ + Q +RI + G K+ ++VY +A TI+E + Sbjct: 773 GLNL-VGANHLFLLDLHWNPQLENQAQDRI-----YRMGQKKDIYVYKFMALETIEERIK 826 Query: 182 QRLRTKSTIQDLLLNALKKET 202 K I + +L K+ T Sbjct: 827 ALQERKLEIANAMLTGSKQVT 847 >gi|156847675|ref|XP_001646721.1| hypothetical protein Kpol_1023p32 [Vanderwaltozyma polyspora DSM 70294] gi|156117401|gb|EDO18863.1| hypothetical protein Kpol_1023p32 [Vanderwaltozyma polyspora DSM 70294] Length = 1178 Score = 96.2 bits (238), Expect = 3e-18, Method: Composition-based stats. Identities = 38/163 (23%), Positives = 65/163 (39%), Gaps = 27/163 (16%) Query: 53 DEKIKAL----EVIIEKANAAPIIVAYHFNSDLARLQK--------------AFPQGRTL 94 KI+AL +VI +++ I++ F+S L L++ F +L Sbjct: 1002 SAKIEALLKHLKVIQDQSAGEQIVIFSQFSSYLDILEQDLNEALSTKETIIYKFDGRLSL 1061 Query: 95 DKDPCTIQEWNEG---KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERI 151 + ++E+ K +L + G GLNL + + WW Q I+RI Sbjct: 1062 KERSTVLKEFTTKDLTKQKILLLSLKAGGVGLNLTCSSHAFMM-DPWWSPSMEDQAIDRI 1120 Query: 152 GVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 + G V V I Q +I+E +L+ K TI + + Sbjct: 1121 -----HRIGQSSNVKVVRFIVQGSIEEKMLKIQERKRTIGEAM 1158 >gi|145539209|ref|XP_001455299.1| hypothetical protein [Paramecium tetraurelia strain d4-2] gi|124423098|emb|CAK87902.1| unnamed protein product [Paramecium tetraurelia] Length = 1741 Score = 96.2 bits (238), Expect = 3e-18, Method: Composition-based stats. Identities = 31/141 (21%), Positives = 60/141 (42%), Gaps = 20/141 (14%) Query: 70 PIIVAYHFNSDLARLQKAFPQGR-------------TLDKDPCTIQEWNE-GKIPLLFAH 115 ++V F + L + + + + ++ + ++NE I +L Sbjct: 1543 KVLVFSRFRAALQLIAEQLLKAQFPGLQYLILDGSVPQNQRYPLVTKFNEDPDIRVLLLT 1602 Query: 116 PASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNT 175 G GLNL NI++ F ++ QQ ++R + G K V V+ LI ++T Sbjct: 1603 TQVGGLGLNL-SSANIVIMFDHDYNPVNDQQAMDR-----AHRIGQKNVVQVFRLIVKDT 1656 Query: 176 IDELVLQRLRTKSTIQDLLLN 196 ++E ++ R KS I ++N Sbjct: 1657 LEEKIMGIQRFKSAISKAIVN 1677 >gi|326485451|gb|EGE09461.1| DNA repair and recombination protein RAD26 [Trichophyton equinum CBS 127.97] Length = 1035 Score = 96.2 bits (238), Expect = 3e-18, Method: Composition-based stats. Identities = 29/163 (17%), Positives = 59/163 (36%), Gaps = 20/163 (12%) Query: 53 DEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQK-----------AFPQGRTLDKDPC 99 K++ ++ ++E K ++ L L++ + Sbjct: 546 SGKMQVVKSLLELWKDTGHKTLLFAQHRIMLDILERFIRGFDGFNYRRMDGNTPIKVRQS 605 Query: 100 TIQEWNE-GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQ 158 + E+N + + G G+NL G + ++ + W+ Q ER + Sbjct: 606 MVDEFNNDPDLHVFLLTTKVGGLGVNLT-GADRVIIYDPDWNPSTDVQARERAW-----R 659 Query: 159 AGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 G KR V +Y L+ TI+E + R K + + +L K+ Sbjct: 660 LGQKREVTIYRLMTAGTIEEKIYHRQIFKQFLTNKILRDPKQR 702 >gi|313221625|emb|CBY36111.1| unnamed protein product [Oikopleura dioica] Length = 1267 Score = 96.2 bits (238), Expect = 3e-18, Method: Composition-based stats. Identities = 29/169 (17%), Positives = 60/169 (35%), Gaps = 18/169 (10%) Query: 33 LQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFP--- 89 ++AN A+ D + K++ L +++ I++ L + K Sbjct: 391 RRMANNAI-KDIDLDLLLSESGKMQVLADLVDAIIPEKILIFSQSIKILDIIAKILDDKT 449 Query: 90 --------QGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDL 141 + + +D + ++ +I + GL L ++ + W+ Sbjct: 450 VNFIRMDGKDKLPIRDEKVKRFQSDKRIKVFMLTTGVGAVGLTLT-AATRVIVYDPDWNP 508 Query: 142 EEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 Q ++R + G R V V+ LI TI+E + R K +I Sbjct: 509 GRDDQAVDR-----AYRIGQTRPVVVFRLITCETIEEKIYSRQLFKKSI 552 >gi|242056785|ref|XP_002457538.1| hypothetical protein SORBIDRAFT_03g009030 [Sorghum bicolor] gi|241929513|gb|EES02658.1| hypothetical protein SORBIDRAFT_03g009030 [Sorghum bicolor] Length = 1208 Score = 96.2 bits (238), Expect = 3e-18, Method: Composition-based stats. Identities = 34/156 (21%), Positives = 58/156 (37%), Gaps = 19/156 (12%) Query: 53 DEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQ----------KAFPQGRTLDKDPCT 100 K+K +E +++ K +++ L L+ + + Sbjct: 734 SGKMKVVEQVLKVWKDQGHRVLLFTQTQQMLDILENFLTACDYQYRRMDGLTPAKQRMAL 793 Query: 101 IQEWNE-GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQA 159 I E+N +I + G G NL G N ++ + W+ Q ER + Sbjct: 794 IDEFNNTDEIFVFILTTKVGGLGTNLT-GANRIIIYDPDWNPSTDMQARERAW-----RI 847 Query: 160 GFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 G R V VY LI + TI+E V R K + + +L Sbjct: 848 GQTRDVTVYRLITRGTIEEKVYHRQIYKHFLTNKVL 883 >gi|255947258|ref|XP_002564396.1| Pc22g03550 [Penicillium chrysogenum Wisconsin 54-1255] gi|211591413|emb|CAP97643.1| Pc22g03550 [Penicillium chrysogenum Wisconsin 54-1255] Length = 1454 Score = 96.2 bits (238), Expect = 3e-18, Method: Composition-based stats. Identities = 29/171 (16%), Positives = 73/171 (42%), Gaps = 20/171 (11%) Query: 45 EKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLA---------RLQKAFPQGRT 93 H K++ L +++ + A +++ F +L L+ GR Sbjct: 947 SHHRLVEASGKLRLLNLMLPQLRARGHRVLIFSQFLENLDIVEDFLAGLELKYRRLDGRM 1006 Query: 94 LDKDPC-TIQEWNEGKIPLL--FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 ++ +I E+N P S G G+NL + ++ ++ ++ Q + R Sbjct: 1007 SSREKQKSIDEFNAPDSPFFAFLLSTRSGGVGINL-ATADTVIIMDPDFNPKQDMQALSR 1065 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 + G K V V++L+ + +++E ++Q+ ++K + +L++ ++ + Sbjct: 1066 -----AHRIGQKNTVLVFHLVVRASVEEKIMQKGKSKMALDHVLIDRIEAD 1111 >gi|253742393|gb|EES99228.1| Chromodomain helicase-DNA-binding protein, putative [Giardia intestinalis ATCC 50581] Length = 2636 Score = 96.2 bits (238), Expect = 3e-18, Method: Composition-based stats. Identities = 34/201 (16%), Positives = 77/201 (38%), Gaps = 29/201 (14%) Query: 19 NIEAFNSASKTVKCLQL---ANGA-VYYDEEKHWKEVHD-----EKIKALEVIIEKAN-- 67 +++NS +QL N + +D + H + D K + L+ +++K N Sbjct: 1536 TAKSYNSVKLQNLLMQLRKVCNHPYIIHDLKLHTASLKDMVDGSGKFQVLDKLLDKLNSE 1595 Query: 68 AAPIIVAYHFNSDLARLQ----------KAFPQGRTLDKDPCTIQEWNEG--KIPLLFAH 115 +++ L L+ + T ++ I +NE K + Sbjct: 1596 GHRVLIFSQLIKTLDILERYCFYKKYKFQRLQGSMTSEQRRRAINNFNEKNSKDFIFLLS 1655 Query: 116 PASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNT 175 S G G+NL + ++ F ++ + Q R+ + G + V +Y L+ +++ Sbjct: 1656 TRSGGQGINL-ATADTVIIFDADYNPQNDLQAAGRV-----HRIGQSKPVTIYRLVTRDS 1709 Query: 176 IDELVLQRLRTKSTIQDLLLN 196 ++E +L K + ++ Sbjct: 1710 VEERILDIGHRKLMLDYAIIQ 1730 >gi|322707206|gb|EFY98785.1| SNF2-family ATP dependent chromatin remodeling factor snf21 [Metarhizium anisopliae ARSEF 23] Length = 1416 Score = 96.2 bits (238), Expect = 3e-18, Method: Composition-based stats. Identities = 39/225 (17%), Positives = 83/225 (36%), Gaps = 33/225 (14%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQL---ANGAVYYDEEKHWKEVHD----- 53 K Y + + N+ + +QL N +DE ++ Sbjct: 783 KLYKQMVTHNKLVVSDGKGGKTNARGLSNMIMQLRKLCNHPFVFDEVENVMNPMSISNDL 842 Query: 54 -----EKIKALEVIIE--KANAAPIIVAYHFNSDLARLQ---------KAFPQGRTL-DK 96 K + L+ I+ +A +++ + + + ++ G T D+ Sbjct: 843 LWRTAGKFELLDRILPKYQATGHRVLMFFQMTAIMDIMEDYLRYRKFEYLRLDGTTKSDE 902 Query: 97 DPCTIQEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 ++E+N K + + G GLNLQ + ++ + W+ + Q Sbjct: 903 RSDLLKEFNAPDSKYFMFLLSTRAGGLGLNLQT-ADTVIIYDSDWNPHQDLQA-----QD 956 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 R + G K V + LI+ N+++E +L+R R K + ++ A + Sbjct: 957 RAHRIGQKNEVRILRLISSNSVEEKILERARFKLDMDGKVIQAGR 1001 >gi|296415159|ref|XP_002837259.1| hypothetical protein [Tuber melanosporum Mel28] gi|295633120|emb|CAZ81450.1| unnamed protein product [Tuber melanosporum] Length = 1362 Score = 96.2 bits (238), Expect = 3e-18, Method: Composition-based stats. Identities = 37/226 (16%), Positives = 81/226 (35%), Gaps = 34/226 (15%) Query: 2 KQYHKFQRELYCDL----QGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIK 57 K Y + + +G + ++ ++ +L N ++E + Sbjct: 732 KLYQQMMNNGILYVNEPDKGGKLGVRGLSNMIMQLRKLCNHPFVFEEVESAINPTKVNND 791 Query: 58 ALE------VIIEK------ANAAPIIVAYHFNSDLARL---------QKAFPQGRTL-D 95 AL ++++ A +++ + + + + G T D Sbjct: 792 ALWRTAGKFELLDRLLPKFFATRHRVLMFFQMTQIMNIMEDFLHLRGFRYLRLDGSTKAD 851 Query: 96 KDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGV 153 ++E+N P + + G GLNLQ + ++ + W+ + Q Sbjct: 852 DRSALLKEFNAPDSPYFIFLLSTRAGGLGLNLQT-ADTVIIYDSDWNPHQDLQA-----Q 905 Query: 154 TRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 R + G K V + LI N+++E +L+R + K I ++ A K Sbjct: 906 DRAHRIGQKNEVRILRLITSNSVEERILERAQYKLDIDGKVIQAGK 951 >gi|326670150|ref|XP_689596.5| PREDICTED: hypothetical protein LOC553504 [Danio rerio] Length = 1269 Score = 96.2 bits (238), Expect = 3e-18, Method: Composition-based stats. Identities = 37/169 (21%), Positives = 66/169 (39%), Gaps = 25/169 (14%) Query: 30 VKCLQ-LANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAF 88 +K +Q L N + ++ + + + LE L+ Sbjct: 444 MKVMQKLLNHFIAKKDKVLLFSLSTKLLDVLESYC----------------MAEGLEYHR 487 Query: 89 PQGRTLDKDP-CTIQEWNE-GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 G T KD ++E+N + L + G GLN G N++V F W+ Q Sbjct: 488 LDGNTKSKDRVKIVKEFNSSRDVNLCLVSTLAGGLGLNF-IGANVVVLFDPTWNPANDLQ 546 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 I+R+ + G R V V+ LI+ T++E++ R K +Q ++ Sbjct: 547 AIDRV-----YRIGQCRDVTVFRLISLGTVEEIIYLRQVYKQQLQSSVI 590 >gi|212534786|ref|XP_002147549.1| SNF2 family helicase/ATPase, putative [Penicillium marneffei ATCC 18224] gi|210069948|gb|EEA24038.1| SNF2 family helicase/ATPase, putative [Penicillium marneffei ATCC 18224] Length = 1115 Score = 96.2 bits (238), Expect = 3e-18, Method: Composition-based stats. Identities = 43/231 (18%), Positives = 87/231 (37%), Gaps = 43/231 (18%) Query: 6 KFQRELYCDLQGENIEAFNSAS--------KTVKCLQLAN-------------GAVYYDE 44 Q + Y + ++I+A N A+ +QL G Y + Sbjct: 423 DMQVKWYQKILEKDIDAVNGAAGKRESKTRLLNIVMQLRKCCNHPYLFEGAEPGPPYTTD 482 Query: 45 EKHWKEVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARL---------QKAFPQGRT 93 E + K+ L+ I+ + + +++ + L L + G T Sbjct: 483 EHLV--DNSGKMVVLDKILNRMKKQGSRVLIFSQMSRVLDILEDYCVFREHKYCRIDGST 540 Query: 94 LDKDP-CTIQEWNE--GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 +D I E+N+ + + G G+NL +I+V F W+ + Q ++R Sbjct: 541 AHEDRIAAIDEYNKEGSDKFIFLLTTRAGGLGINLTT-ADIVVLFDSDWNPQADLQAMDR 599 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 + G K+ V V+ + ++ I+E VL+R K + L++ + + Sbjct: 600 -----AHRIGQKKQVVVFRFVTEHAIEEKVLERAAQKLRLDQLVIQQGRAQ 645 >gi|254572878|ref|XP_002493548.1| Swi2/Snf2-related ATPase that is the structural component of the SWR1 complex [Pichia pastoris GS115] gi|238033347|emb|CAY71369.1| Swi2/Snf2-related ATPase that is the structural component of the SWR1 complex [Pichia pastoris GS115] gi|328354627|emb|CCA41024.1| helicase SWR1 [Pichia pastoris CBS 7435] Length = 1583 Score = 96.2 bits (238), Expect = 3e-18, Method: Composition-based stats. Identities = 31/176 (17%), Positives = 70/176 (39%), Gaps = 19/176 (10%) Query: 34 QLANGAVYYDEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAF--- 88 QL +K + K++ L ++ + +N ++ L L++ Sbjct: 1282 QLQTKLSIAFPDKSLLQYDCGKLQKLASLLLELKSNGHRALIFTQMTKVLDILEQFLNIQ 1341 Query: 89 ------PQGRTLDKDPCTI-QEWNEGK-IPLLFAHPASCGHGLNLQYGGNILVFFSLWWD 140 G T +D + + +N+ I S G G+NL G + ++F+ W+ Sbjct: 1342 GYRYMRLDGATKIEDRQVLTERFNKDDRITCFILSTRSGGLGINLT-GADTVIFYDSDWN 1400 Query: 141 LEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 +Q +R + G R V +Y +++ TI+ +L++ K + ++++ Sbjct: 1401 PAMDKQCQDRC-----HRIGQTRDVHIYRFVSEYTIESNILKKANQKRQLDNVIIQ 1451 >gi|218187342|gb|EEC69769.1| hypothetical protein OsI_00025 [Oryza sativa Indica Group] gi|222617568|gb|EEE53700.1| hypothetical protein OsJ_00022 [Oryza sativa Japonica Group] Length = 1355 Score = 96.2 bits (238), Expect = 3e-18, Method: Composition-based stats. Identities = 33/156 (21%), Positives = 58/156 (37%), Gaps = 19/156 (12%) Query: 53 DEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQ----------KAFPQGRTLDKDPCT 100 K+K +E +++ K +++ L ++ + + Sbjct: 880 SGKMKVVEQVLKVWKEQGHRVLLFTQTQQMLDIMENFLTACEYQYRRMDGLTPAKQRMAL 939 Query: 101 IQEWNE-GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQA 159 I E+N +I + G G NL G N ++ + W+ Q ER + Sbjct: 940 IDEFNNTDEIFIFILTTKVGGLGTNLT-GANRIIIYDPDWNPSTDMQARERAW-----RI 993 Query: 160 GFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 G R V VY LI + TI+E V R K + + +L Sbjct: 994 GQTRDVTVYRLITRGTIEEKVYHRQIYKHFLTNKVL 1029 >gi|297202132|ref|ZP_06919529.1| conserved hypothetical protein [Streptomyces sviceus ATCC 29083] gi|297148045|gb|EDY57603.2| conserved hypothetical protein [Streptomyces sviceus ATCC 29083] Length = 747 Score = 96.2 bits (238), Expect = 3e-18, Method: Composition-based stats. Identities = 43/199 (21%), Positives = 76/199 (38%), Gaps = 34/199 (17%) Query: 14 DLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKA--NAAPI 71 +L + EA+ A + + + A Y EK K+ L I+ +A N Sbjct: 519 ELSASDEEAYREAVRAGNFMAMRRAA-YLRPEK------SAKLDRLLEIVREAGENGQKT 571 Query: 72 IVAYHFNSDLARLQKAFPQGRT--------------LDKDPCTIQEWNEGKIP---LLFA 114 +V HF L +++A T + + ++ +P +L A Sbjct: 572 VVFSHFKDVLNVVREALATAHTDGTALFGPLTGSVPAGRRQQMVDDF--ADVPGPAVLVA 629 Query: 115 HPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQN 174 + G GLN+Q +++V Q + R + G R V VY L+A Sbjct: 630 QIQAAGVGLNMQ-AASVVVICEPQIKPTIEHQAVAR-----AHRMGQVRPVRVYRLLATG 683 Query: 175 TIDELVLQRLRTKSTIQDL 193 +DE +++ L TK+ + D Sbjct: 684 GVDERLVKLLETKTRLFDA 702 >gi|156049585|ref|XP_001590759.1| hypothetical protein SS1G_08499 [Sclerotinia sclerotiorum 1980] gi|154692898|gb|EDN92636.1| hypothetical protein SS1G_08499 [Sclerotinia sclerotiorum 1980 UF-70] Length = 915 Score = 96.2 bits (238), Expect = 3e-18, Method: Composition-based stats. Identities = 35/155 (22%), Positives = 63/155 (40%), Gaps = 24/155 (15%) Query: 53 DEKIKALEVIIEKANAAP---IIVAYHFNSDLARLQKAFPQGRTL-------------DK 96 K +AL II+ + P +++ + S L +QK Q DK Sbjct: 741 SSKTEALMQIIKVTHNDPLSKVVIFSQWTSFLNIIQKQLEQSGIKFARIDGSMTAPQRDK 800 Query: 97 DPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 +++ + + +L A A C GLNL + ++ WW Q ++R+ Sbjct: 801 GMQSLES--DPECRVLLASLAVCSVGLNL-VSADTVILADSWWAPAIEDQAVDRV----- 852 Query: 157 RQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQ 191 + G KR V+ L+ + +I+E VL+ K + Sbjct: 853 YRLGQKRDCKVWRLVMEGSIEERVLEIQGEKRKLA 887 >gi|115944263|ref|XP_001189861.1| PREDICTED: similar to LD32234p, partial [Strongylocentrotus purpuratus] Length = 2083 Score = 96.2 bits (238), Expect = 3e-18, Method: Composition-based stats. Identities = 30/156 (19%), Positives = 66/156 (42%), Gaps = 19/156 (12%) Query: 55 KIKALEVIIEKA--NAAPIIVAYHFNSDLARLQKAF---------PQGRTLDKDPC-TIQ 102 K++ ++ ++ K + +++ L L++ G T + ++ Sbjct: 758 KLQTMDGLLRKLKTEGSRVLIFTQMTKMLDILERFLNFHGHIYLRLDGTTKVEQRQIMME 817 Query: 103 EWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGF 161 +N + +I S G G+NL G N ++F+ W+ Q +R + G Sbjct: 818 RFNKDPRIFCFILSTRSGGMGVNLT-GANAVIFYDSDWNPTMDAQAQDRC-----HRIGQ 871 Query: 162 KRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 R V +Y LI++ +I+E +L++ K + D+ + Sbjct: 872 TRDVHIYRLISEMSIEENILKKSNQKRLLIDVSIEG 907 >gi|115678452|ref|XP_788939.2| PREDICTED: similar to LD32234p, partial [Strongylocentrotus purpuratus] Length = 2021 Score = 96.2 bits (238), Expect = 3e-18, Method: Composition-based stats. Identities = 30/156 (19%), Positives = 66/156 (42%), Gaps = 19/156 (12%) Query: 55 KIKALEVIIEKA--NAAPIIVAYHFNSDLARLQKAF---------PQGRTLDKDPC-TIQ 102 K++ ++ ++ K + +++ L L++ G T + ++ Sbjct: 696 KLQTMDGLLRKLKTEGSRVLIFTQMTKMLDILERFLNFHGHIYLRLDGTTKVEQRQIMME 755 Query: 103 EWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGF 161 +N + +I S G G+NL G N ++F+ W+ Q +R + G Sbjct: 756 RFNKDPRIFCFILSTRSGGMGVNLT-GANAVIFYDSDWNPTMDAQAQDRC-----HRIGQ 809 Query: 162 KRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 R V +Y LI++ +I+E +L++ K + D+ + Sbjct: 810 TRDVHIYRLISEMSIEENILKKSNQKRLLIDVSIEG 845 >gi|325087704|gb|EGC41014.1| TBP associated factor [Ajellomyces capsulatus H88] Length = 1756 Score = 96.2 bits (238), Expect = 3e-18, Method: Composition-based stats. Identities = 42/209 (20%), Positives = 76/209 (36%), Gaps = 30/209 (14%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEV 61 KQY + Q+ L +I A K + L D + ++ Sbjct: 1478 KQYDEIQKSLAAK--NSHIRDVAHAPKLIALRDL-----LVDCGIGVDPSTEGELDTGAS 1530 Query: 62 IIEKANAAPIIVAYHFNSDLAR-----LQKAFPQGRTLD--------KDPCTIQEWN-EG 107 + +V L L+K P + L K + ++N + Sbjct: 1531 YVSP---HRALVFCQMKEMLDIVQNDVLKKLLPSVQFLRLDGSVEATKRQSIVNQFNTDP 1587 Query: 108 KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFV 167 +L + G GLNL G + ++F W+ ++ Q ++R + G K+ V V Sbjct: 1588 SYDVLLLTTSVGGLGLNLT-GADTVIFVEHDWNPQKDIQAMDR-----AHRIGQKKVVNV 1641 Query: 168 YYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 Y LI + T++E +L R K + ++N Sbjct: 1642 YRLITRGTLEEKILNLQRFKIDVASTVVN 1670 >gi|254574520|ref|XP_002494369.1| Catalytic subunit of the SWI/SNF chromatin remodeling complex involved in transcriptional regulation [Pichia pastoris GS115] gi|238034168|emb|CAY72190.1| Catalytic subunit of the SWI/SNF chromatin remodeling complex involved in transcriptional regulation [Pichia pastoris GS115] gi|328353801|emb|CCA40198.1| SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4 [Pichia pastoris CBS 7435] Length = 1649 Score = 96.2 bits (238), Expect = 3e-18, Method: Composition-based stats. Identities = 41/226 (18%), Positives = 81/226 (35%), Gaps = 33/226 (14%) Query: 1 MKQYHKFQRELYCDLQGENIEAFNSASKTVKCLQL---ANGAVYYDEEKHWKEVH----- 52 +K Y + + + E+ + K +QL N ++E ++ Sbjct: 998 IKLYEQMLKYNQLFVGDESKKPIGVKGLNNKLMQLRKICNHPFVFEEVENLINPTRETNN 1057 Query: 53 -----DEKIKALEVIIEK--ANAAPIIVAYH------FNSDLARLQ---KAFPQGRTLDK 96 K + L+ I+ K A +++ + D RL+ G T Sbjct: 1058 NIWRVSGKFELLDRILPKFKATGHRVLIFFQMTQIMDIMEDFLRLRDMKYLRLDGATKSD 1117 Query: 97 DPCT-IQEWNE--GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGV 153 D ++ +N + G GLNLQ + ++ F W+ + Q Sbjct: 1118 DRQDMLRLFNAEGSDYFAFLLSTRAGGLGLNLQT-ADTVIIFDSDWNPHQDLQA-----Q 1171 Query: 154 TRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 R + G K V + LI +++I+E++L + K I ++ A + Sbjct: 1172 DRAHRIGQKNEVRILRLITEDSIEEVILSKAYEKLDIDGKVIQAGR 1217 >gi|308800854|ref|XP_003075208.1| Cockayne syndrome group B (ISS) [Ostreococcus tauri] gi|116061762|emb|CAL52480.1| Cockayne syndrome group B (ISS) [Ostreococcus tauri] Length = 1134 Score = 96.2 bits (238), Expect = 3e-18, Method: Composition-based stats. Identities = 43/191 (22%), Positives = 68/191 (35%), Gaps = 23/191 (12%) Query: 23 FNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLA 82 N + Q A+ Y D + K K+ +L + +V L Sbjct: 633 VNHPDLLERRTQAASEE-YGDASRSGKLQVTLKVLSLW----REQGHRCLVFSQTQQMLD 687 Query: 83 RLQKAFPQG----RTLDKDPCT------IQEWNEGK--IPLLFAHPASCGHGLNLQYGGN 130 L+ A + R +D + I E+N+ I + G G+NL G N Sbjct: 688 ILEAAVARAGYSYRRMDGNTSIGMRMSLIDEFNDNDKGIFVFLLTTKVGGLGVNLT-GAN 746 Query: 131 ILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 ++ F W+ Q ER + G ++ V VY LI TI+E V R K + Sbjct: 747 RVMLFDPDWNPSTDAQARERAW-----RIGQQKEVTVYRLITAGTIEEKVYHRQIYKEFL 801 Query: 191 QDLLLNALKKE 201 +L K+ Sbjct: 802 TSKVLKDPKQR 812 >gi|322494672|emb|CBZ29974.1| putative DNA-dependent ATPase [Leishmania mexicana MHOM/GT/2001/U1103] Length = 1098 Score = 95.8 bits (237), Expect = 3e-18, Method: Composition-based stats. Identities = 46/225 (20%), Positives = 81/225 (36%), Gaps = 41/225 (18%) Query: 6 KFQRELYCDLQGENIEAFN-----SASKTVK---CLQLANGAVYYDEEKH-WKEVHDEKI 56 K QRE Y ++ ++ E N AS T ++ N D + V DEK+ Sbjct: 407 KKQREWYMNVLAKDAEVLNKAGGSVASLTNAMMSLRKVINHPYLMDGGEEGPPFVTDEKL 466 Query: 57 -----------KALEVIIEKANAA-PIIVAYHFNSDLARLQ---------KAFPQGRT-- 93 K L + +++ F S L L+ G T Sbjct: 467 VRTSGKMIILDKLLHRLRADVQGKHKVLIFSQFTSMLNILEDYCNMRGFMYCRIDGNTSG 526 Query: 94 LDKDPCTIQEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERI 151 D+D + +N + + G G+NLQ N ++ + W+ + Q Sbjct: 527 YDRDSQ-MASFNSPSSDYFIFLLSTRAGGLGINLQ-AANHVILYDSDWNPQMDLQA---- 580 Query: 152 GVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 R + G KR+V VY + T++E + +R K + +++ Sbjct: 581 -QDRAHRIGQKRSVRVYRFVTDGTLEEKMYRRALKKLYLDAVVVQ 624 >gi|315055153|ref|XP_003176951.1| TATA-binding protein-associated factor MOT1 [Arthroderma gypseum CBS 118893] gi|311338797|gb|EFQ97999.1| TATA-binding protein-associated factor MOT1 [Arthroderma gypseum CBS 118893] Length = 1906 Score = 95.8 bits (237), Expect = 3e-18, Method: Composition-based stats. Identities = 34/164 (20%), Positives = 67/164 (40%), Gaps = 18/164 (10%) Query: 34 QLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRT 93 +LA GA Y + ++K + I++ ++ + F Sbjct: 1676 ELATGASYVSPHRALIF---CQMKEMLDIVQNDVLRKLLPSVQFL--------RLDGSVE 1724 Query: 94 LDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIG 152 K + ++N + +L + G GLNL G + ++F W+ ++ Q ++R Sbjct: 1725 ATKRQNIVNQFNTDPSYDVLLLTTSVGGLGLNLT-GADTVIFVEHDWNPQKDIQAMDR-- 1781 Query: 153 VTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + G K+ V VY LI + T++E +L R K + ++N Sbjct: 1782 ---AHRIGQKKVVNVYRLITRGTLEEKILNLQRFKIDVASTVVN 1822 >gi|304406559|ref|ZP_07388215.1| SNF2-related protein [Paenibacillus curdlanolyticus YK9] gi|304344617|gb|EFM10455.1| SNF2-related protein [Paenibacillus curdlanolyticus YK9] Length = 1044 Score = 95.8 bits (237), Expect = 3e-18, Method: Composition-based stats. Identities = 29/164 (17%), Positives = 60/164 (36%), Gaps = 25/164 (15%) Query: 53 DEKIKALEVIIEKA--NAAPIIVAYHFNSD----------LARLQKAFPQGRTLDK-DPC 99 K++ L ++++ ++ + + Q + G T Sbjct: 862 SSKLERLLAMVKELREEGDRCLIFTQYIGMGNMLQQVLQNQLQEQVLYLNGSTSKTARDR 921 Query: 100 TIQEWNEGKIP------LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGV 153 I+++ +P + + G GLNL N + F WW+ Q +R Sbjct: 922 MIEQFQSQTLPADEQPNVFILSIKAGGVGLNLT-AANHVFHFDRWWNPAVENQATDR--- 977 Query: 154 TRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + G R V V+ IA T++E + + L +K + D ++ + Sbjct: 978 --AYRMGQTRDVQVHKFIALGTLEEKIDEMLESKQRLSDDVITS 1019 >gi|291236092|ref|XP_002737975.1| PREDICTED: predicted protein-like, partial [Saccoglossus kowalevskii] Length = 759 Score = 95.8 bits (237), Expect = 3e-18, Method: Composition-based stats. Identities = 31/119 (26%), Positives = 53/119 (44%), Gaps = 11/119 (9%) Query: 80 DLARLQKAFPQGRTLDKDPCTIQEWNEGK-IPLLFAHPASCGHGLNLQYGGNILVFFSLW 138 + R+ P ++ + E+N+ K + + + G GLN+ G NI++ F Sbjct: 15 EYRRIDGKTPGPVRMN----YVHEFNQDKSVSVCLISTKAGGLGLNMT-GANIVIIFDPN 69 Query: 139 WDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 W+ QQ R + G +R V VY LI+ TI+E + R K I L+++ Sbjct: 70 WNPAHDQQA-----QDRAYRIGQQRDVKVYRLISSGTIEENMYLRQIYKQQIASTLVSS 123 >gi|218189474|gb|EEC71901.1| hypothetical protein OsI_04668 [Oryza sativa Indica Group] Length = 1105 Score = 95.8 bits (237), Expect = 3e-18, Method: Composition-based stats. Identities = 43/207 (20%), Positives = 86/207 (41%), Gaps = 24/207 (11%) Query: 8 QRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKAN 67 QRELY ++ N NSA + L G ++ K++ L ++ + Sbjct: 786 QRELYINILERNYSKLNSAIRNG----LEVGQQATEDVFLSLIASSGKLQLLHKLLPRLK 841 Query: 68 --AAPIIVAYHFNSDLARL---------QKAFPQGRT-LDKDPCTIQEWNE--GKIPLLF 113 +++ L L + A G+T L +I+E+ + + Sbjct: 842 ERGNRVLIFSQMTRMLDILEDFLCSLGYKYARIDGQTSLSARQESIKEYKNIDSETFIFL 901 Query: 114 AHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQ 173 + G G++L G + ++ + ++ Q +R + G R V VY LI + Sbjct: 902 MSTRAGGMGVDL-PGADRVIIYDPDFNPFMDLQA-----QSRAHRIGQTRPVVVYQLITK 955 Query: 174 NTIDELVLQRLRTKSTIQDLLLNALKK 200 +++E +LQ+ + K I+++L+N+ KK Sbjct: 956 CSVEEKILQKSKQKLAIENMLMNSSKK 982 >gi|197261380|ref|YP_002154196.1| putative helicase [Pseudomonas phage LBL3] gi|197244470|emb|CAR31205.1| putative helicase [Pseudomonas phage LBL3] Length = 519 Score = 95.8 bits (237), Expect = 3e-18, Method: Composition-based stats. Identities = 39/215 (18%), Positives = 87/215 (40%), Gaps = 24/215 (11%) Query: 2 KQYHKFQRELYCDLQGEN---IEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDE---- 54 K Y + + + + LQ E+ +F++A+ K Q+A+G + E D Sbjct: 300 KVYQRVEEDYHFVLQNEDFMLDVSFDAAAARSKLKQVASGYINVYGEPVILPPEDNPRFA 359 Query: 55 -KIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFP---------QGRTLD-KDPCTIQE 103 LE ++E+ II+ ++ +++ G T + + I + Sbjct: 360 VFTDLLEGLLEEDQERSIIIWAMRIQEIDQIKAYLEAQGISFGTYYGETKEAEREKLIDD 419 Query: 104 WNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKR 163 + ++ + +PA+ G G+ L ++ ++++ D E Q R + G Sbjct: 420 FQAKRVQVFLGNPAAAGIGITLT-AADVAIYYTTDEDNELRMQ-----SEDRNHRIGTVN 473 Query: 164 AVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNAL 198 +V + LI ++IDE + L K + +++ + Sbjct: 474 SVLYFDLICLDSIDEKIQTSLEWKRNLASYVVDGV 508 >gi|171683845|ref|XP_001906864.1| hypothetical protein [Podospora anserina S mat+] gi|170941883|emb|CAP67535.1| unnamed protein product [Podospora anserina S mat+] Length = 1062 Score = 95.8 bits (237), Expect = 3e-18, Method: Composition-based stats. Identities = 23/176 (13%), Positives = 61/176 (34%), Gaps = 20/176 (11%) Query: 41 YYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQ------------KAF 88 Y + + I+ L+ I E I+ + S L ++ + Sbjct: 876 YLRDNWEDSAKVTQVIELLKTIQETNEKT--IIFSQWTSLLDLIECQIKYSLKLRHCRYT 933 Query: 89 PQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMI 148 +D + ++ + GLNL + ++ +W+ Q + Sbjct: 934 GDMSRTHRDEAVQDFVENPENKVMLVSLRAGNAGLNLTC-ASRVIICDPFWNPFIEMQAV 992 Query: 149 ERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIH 204 +R + G ++ V V+ ++ + T+++ ++ K + + L+ K + + Sbjct: 993 DR-----AHRIGQQKEVQVHRILVKETVEDRIMDLQEKKRELVESALDEDKSKQLG 1043 >gi|254578924|ref|XP_002495448.1| ZYRO0B11638p [Zygosaccharomyces rouxii] gi|238938338|emb|CAR26515.1| ZYRO0B11638p [Zygosaccharomyces rouxii] Length = 1478 Score = 95.8 bits (237), Expect = 3e-18, Method: Composition-based stats. Identities = 27/159 (16%), Positives = 63/159 (39%), Gaps = 20/159 (12%) Query: 52 HDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARL----------QKAFPQGRTLDKDPC 99 K+ L+ ++ + + +++ L L + ++ Sbjct: 700 SSGKMVLLDKLLTRLKKDGHRVLIFSQMVRMLDILGDYLSIKGINFQRLDGTVPSNQRRI 759 Query: 100 TIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 +I +N + + G G+NL + ++ F W+ + Q + R Sbjct: 760 SIDHFNAPDSNDFVFLLSTRAGGLGINLMT-ADTVIIFDSDWNPQADLQAMAR-----AH 813 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + G K V VY L++++T++E VL+R R K ++ +++ Sbjct: 814 RIGQKNHVMVYRLVSKDTVEEEVLERARKKMILEYAIIS 852 >gi|296815930|ref|XP_002848302.1| chromodomain helicase hrp3 [Arthroderma otae CBS 113480] gi|238841327|gb|EEQ30989.1| chromodomain helicase hrp3 [Arthroderma otae CBS 113480] Length = 1524 Score = 95.8 bits (237), Expect = 3e-18, Method: Composition-based stats. Identities = 31/167 (18%), Positives = 63/167 (37%), Gaps = 22/167 (13%) Query: 36 ANGAVYYDEEKHWKEVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQKAFPQGRT 93 A G+ +++ K+ L+ ++ K + +++ L L R Sbjct: 764 AGGSTRREDQLKALVTSSGKMMVLDQLLTKLKNDGHRVLIFSQMVRMLNILANYM-DARG 822 Query: 94 LDKDPCT-----------IQEWNE-GKIPL-LFAHPASCGHGLNLQYGGNILVFFSLWWD 140 + I+ +N G + G G+NL + ++ F W+ Sbjct: 823 FNYQRLDGTIAAGPRRLAIEHYNAPGSTDFTFLLSTRAGGLGINLMT-ADTVILFDSDWN 881 Query: 141 LEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTK 187 + Q + R + G + V VY L++++T++E VL+R R K Sbjct: 882 PQADLQAMAR-----AHRIGQTKPVSVYRLVSKDTVEEEVLERARNK 923 >gi|219120392|ref|XP_002180935.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1] gi|217407651|gb|EEC47587.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1] Length = 970 Score = 95.8 bits (237), Expect = 3e-18, Method: Composition-based stats. Identities = 39/222 (17%), Positives = 83/222 (37%), Gaps = 36/222 (16%) Query: 2 KQYHKFQRELYCDLQG--ENIEAFNSASKTVKCLQL--ANGAVYYDEEKHWKEVHD---- 53 + Y K L DL + N + +QL G Y E + + Sbjct: 392 QLYKKL---LLRDLDSITGKVSGKNRTAVLNIVMQLRKCCGHPYLFEGVEDRTLDPLGEH 448 Query: 54 -----EKIKALEVIIEKAN--AAPIIVAYHFNSDLARL---------QKAFPQGRT-LDK 96 K+ ++ ++++ + +++ L L Q G T D Sbjct: 449 LVENCGKLSMVDKLLKRLKSRGSRVLIFTQMTRVLDILEDFMVMRGYQYCRIDGNTNYDD 508 Query: 97 DPCTIQEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 +I E+N + G G+NLQ + + + W+ ++ Q +R Sbjct: 509 RESSIDEFNREGTDKFCFLLSTRAGGLGINLQT-ADTCILYDSDWNPQQDLQAQDRC--- 564 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + G K+ V V+ L+++NT++E +++R + K + +++ Sbjct: 565 --HRLGQKKPVNVFRLVSENTVEEKIVERAQQKLKLDAMVVQ 604 >gi|195436975|ref|XP_002066420.1| GK18104 [Drosophila willistoni] gi|194162505|gb|EDW77406.1| GK18104 [Drosophila willistoni] Length = 842 Score = 95.8 bits (237), Expect = 3e-18, Method: Composition-based stats. Identities = 35/175 (20%), Positives = 69/175 (39%), Gaps = 20/175 (11%) Query: 34 QLANGAVYYDEEKHWKEVHDE-KIKALEVIIEKA--NAAPIIVAYHFNSDLA------RL 84 QL N YD + + D K L+ I+ K +++ F L R+ Sbjct: 627 QLCNKYQLYDVKIPDHLIVDSGKFSYLDKILPKLREEGHRVLLFSQFTMMLDIVEEYLRI 686 Query: 85 QKA----FPQGRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWW 139 +K G + + I ++N + I + + G G+NL ++ + + Sbjct: 687 RKHGFCRLDGGTAVKERQDLITDFNVDDNIFVFLLSTKAGGVGINLTAADTCIIH-DIDF 745 Query: 140 DLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 + +Q +R + G R V +Y LI+++TI+E +L K ++ + Sbjct: 746 NPYNDKQAEDRC-----HRMGQMRPVSIYRLISESTIEEGILMAAEEKLKLEKDI 795 >gi|281211860|gb|EFA86022.1| SNF2-related domain-containing protein [Polysphondylium pallidum PN500] Length = 1897 Score = 95.8 bits (237), Expect = 3e-18, Method: Composition-based stats. Identities = 34/142 (23%), Positives = 58/142 (40%), Gaps = 20/142 (14%) Query: 69 APIIVAYHFNSDLA-----RLQKAFPQGRTLDKDPCT--------IQEWN-EGKIPLLFA 114 +++ S L L+ P L D T + ++N + I LL Sbjct: 1682 HRVLIFAQMKSMLDVVETDLLKHHMPSVTYLRMDGSTDPMKRHSIVNQFNSDPSIDLLLL 1741 Query: 115 HPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQN 174 G GLNL G + ++F W+ + Q ++R + G K+ V VY LI Sbjct: 1742 TTHVGGLGLNLT-GADTVIFLEHDWNPMKDLQAMDR-----AHRIGQKKVVNVYRLITAG 1795 Query: 175 TIDELVLQRLRTKSTIQDLLLN 196 T++E ++ R K I + ++N Sbjct: 1796 TLEEKIMGLQRFKLNIANTIVN 1817 >gi|150864093|ref|XP_001382790.2| ATPase/DNA helicase [Scheffersomyces stipitis CBS 6054] gi|149385349|gb|ABN64761.2| ATPase/DNA helicase [Scheffersomyces stipitis CBS 6054] Length = 1127 Score = 95.8 bits (237), Expect = 3e-18, Method: Composition-based stats. Identities = 35/172 (20%), Positives = 59/172 (34%), Gaps = 23/172 (13%) Query: 40 VYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFP---------- 89 +Y + I L I + +IV F+S L L+ Sbjct: 941 IYLYDPDKSSSKIQALITHLRTIRDSNPGEKVIVFSQFSSYLDILENELKIQGGRDFVIH 1000 Query: 90 --QGRT-LDKDPCTIQEWNEGK----IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLE 142 GR L + + ++N+ + +L + G GLNL + WW Sbjct: 1001 KFDGRLQLSERQKVLDKFNDNTGHDGVTILLLSLKAGGVGLNLTT-ASRAFMMDPWWSPS 1059 Query: 143 EHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 Q I+RI + G V V I N+I+ +L+ K I +++ Sbjct: 1060 VEDQAIDRI-----HRIGQNETVKVVRFIMSNSIETKMLKIQERKKQIGEIV 1106 >gi|310791634|gb|EFQ27161.1| SNF2 family domain-containing protein [Glomerella graminicola M1.001] Length = 1893 Score = 95.8 bits (237), Expect = 3e-18, Method: Composition-based stats. Identities = 36/177 (20%), Positives = 68/177 (38%), Gaps = 37/177 (20%) Query: 51 VHDEKIKALEVII--------EKANAAPI---------IVAYHFNSDLARLQK------- 86 VH K+ AL ++ E + P+ +V L +Q Sbjct: 1634 VHAPKLTALRDLLVDCGIGVEEAESNDPLYQPIKPHRALVFCQMKEMLDMVQNTVLKSML 1693 Query: 87 ------AFPQGRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWW 139 G +K + ++N + +L + G GLNL G + ++F W Sbjct: 1694 PGVTYLRLDGGVEANKRQDIVNKFNSDPSYDVLLLTTSVGGLGLNLT-GADTVIFVEHDW 1752 Query: 140 DLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + ++ Q ++R + G K+ V VY L+ + T++E +L R K + ++N Sbjct: 1753 NPQKDMQAMDR-----AHRIGQKKVVNVYRLVTRGTLEEKILSLQRFKIDVASTVVN 1804 >gi|326478381|gb|EGE02391.1| TATA-binding protein-associated factor MOT1 [Trichophyton equinum CBS 127.97] Length = 1912 Score = 95.8 bits (237), Expect = 3e-18, Method: Composition-based stats. Identities = 34/164 (20%), Positives = 67/164 (40%), Gaps = 18/164 (10%) Query: 34 QLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRT 93 +LA GA Y + ++K + I++ ++ + F Sbjct: 1682 ELATGASYVSPHRALIF---CQMKEMLDIVQNDVLRKLLPSVQFL--------RLDGSVE 1730 Query: 94 LDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIG 152 K + ++N + +L + G GLNL G + ++F W+ ++ Q ++R Sbjct: 1731 ATKRQNIVNQFNTDPSYDVLLLTTSVGGLGLNLT-GADTVIFVEHDWNPQKDIQAMDR-- 1787 Query: 153 VTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + G K+ V VY LI + T++E +L R K + ++N Sbjct: 1788 ---AHRIGQKKVVNVYRLITRGTLEEKILNLQRFKIDVASTVVN 1828 >gi|302307681|ref|NP_984405.2| ADR309Wp [Ashbya gossypii ATCC 10895] gi|299789116|gb|AAS52229.2| ADR309Wp [Ashbya gossypii ATCC 10895] Length = 1486 Score = 95.8 bits (237), Expect = 3e-18, Method: Composition-based stats. Identities = 29/166 (17%), Positives = 71/166 (42%), Gaps = 19/166 (11%) Query: 44 EEKHWKEVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQKAF---------PQGR 92 +K + K+++L V++ + ++ L L++ G Sbjct: 1207 PDKSLLQYDCGKLQSLAVLLRRLKEEGHRALIFTQMTKVLDILEQFLNYHGYLYMRLDGA 1266 Query: 93 TLDKDPCTI-QEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 T +D + + +N + +I + S G G+NL G + ++F+ W+ +Q +R Sbjct: 1267 TKIEDRQILTERFNTDPRITVFILSSRSGGLGINLT-GADTVIFYDSDWNPAMDKQCQDR 1325 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + G R V +Y ++++TI+ +L++ K + ++++ Sbjct: 1326 C-----HRIGQTRDVHIYRFVSEHTIESNILKKANQKRQLDNIVIQ 1366 >gi|190345850|gb|EDK37807.2| hypothetical protein PGUG_01905 [Meyerozyma guilliermondii ATCC 6260] Length = 761 Score = 95.8 bits (237), Expect = 3e-18, Method: Composition-based stats. Identities = 33/162 (20%), Positives = 69/162 (42%), Gaps = 18/162 (11%) Query: 47 HWKEVHDEKIKALEVII-EKANAAPIIVAYHFNSDLARLQK---------AFPQGRTLDK 96 + KI+ L+ +I E +++ F L L G T + Sbjct: 502 EVFYKNSAKIQVLDQLINELLPDHKLLIFSQFTKMLDLLHDWLDFKNIGFCRLDGSTSHE 561 Query: 97 DPCT-IQEWNEGK-IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 D T I ++N K + + G G+NL + +V F W+ + Q I+R+ Sbjct: 562 DRDTQIDQFNTDKSKKVFLLSTRAGGLGINLT-AADTVVIFDNDWNPQVDLQAIDRV--- 617 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + G K+ V +Y + +N+++E+++ + +K ++ L++ Sbjct: 618 --HRIGQKKPVKIYRFLIKNSVEEILISKSYSKRFLEKLVIQ 657 >gi|326473865|gb|EGD97874.1| TBP associated factor Mot1 [Trichophyton tonsurans CBS 112818] Length = 1905 Score = 95.8 bits (237), Expect = 3e-18, Method: Composition-based stats. Identities = 34/164 (20%), Positives = 67/164 (40%), Gaps = 18/164 (10%) Query: 34 QLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRT 93 +LA GA Y + ++K + I++ ++ + F Sbjct: 1675 ELATGASYVSPHRALIF---CQMKEMLDIVQNDVLRKLLPSVQFL--------RLDGSVE 1723 Query: 94 LDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIG 152 K + ++N + +L + G GLNL G + ++F W+ ++ Q ++R Sbjct: 1724 ATKRQNIVNQFNTDPSYDVLLLTTSVGGLGLNLT-GADTVIFVEHDWNPQKDIQAMDR-- 1780 Query: 153 VTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + G K+ V VY LI + T++E +L R K + ++N Sbjct: 1781 ---AHRIGQKKVVNVYRLITRGTLEEKILNLQRFKIDVASTVVN 1821 >gi|55959598|emb|CAI12731.1| transcription termination factor, RNA polymerase II [Homo sapiens] Length = 143 Score = 95.8 bits (237), Expect = 3e-18, Method: Composition-based stats. Identities = 27/116 (23%), Positives = 50/116 (43%), Gaps = 8/116 (6%) Query: 84 LQKAFPQGRTLDKDPCT-IQEWNEGKIP-LLFAHPASCGHGLNLQYGGNILVFFSLWWDL 141 L A G K ++ +N + P ++ + G GLNL GGN L + W+ Sbjct: 15 LTYATIDGSVNPKQRMDLVEAFNHSRGPQVMLISLLAGGVGLNLT-GGNHLFLLDMHWNP 73 Query: 142 EEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 Q +RI + G ++ V ++ + + T++E +LQ K + +L+ Sbjct: 74 SLEDQACDRI-----YRVGQQKDVVIHRFVCEGTVEEKILQLQEKKKDLAKQVLSG 124 >gi|302666050|ref|XP_003024628.1| hypothetical protein TRV_01197 [Trichophyton verrucosum HKI 0517] gi|291188693|gb|EFE44017.1| hypothetical protein TRV_01197 [Trichophyton verrucosum HKI 0517] Length = 1911 Score = 95.8 bits (237), Expect = 3e-18, Method: Composition-based stats. Identities = 34/164 (20%), Positives = 67/164 (40%), Gaps = 18/164 (10%) Query: 34 QLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRT 93 +LA GA Y + ++K + I++ ++ + F Sbjct: 1681 ELATGASYVSPHRALIF---CQMKEMLDIVQNDVLRKLLPSVQFL--------RLDGSVE 1729 Query: 94 LDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIG 152 K + ++N + +L + G GLNL G + ++F W+ ++ Q ++R Sbjct: 1730 ATKRQNIVNQFNTDPSYDVLLLTTSVGGLGLNLT-GADTVIFVEHDWNPQKDIQAMDR-- 1786 Query: 153 VTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + G K+ V VY LI + T++E +L R K + ++N Sbjct: 1787 ---AHRIGQKKVVNVYRLITRGTLEEKILNLQRFKIDVASTVVN 1827 >gi|237831501|ref|XP_002365048.1| chromodomain helicase DNA binding protein, putative [Toxoplasma gondii ME49] gi|211962712|gb|EEA97907.1| chromodomain helicase DNA binding protein, putative [Toxoplasma gondii ME49] gi|221506789|gb|EEE32406.1| chromodomain helicase DNA binding protein, putative [Toxoplasma gondii VEG] Length = 2279 Score = 95.8 bits (237), Expect = 3e-18, Method: Composition-based stats. Identities = 22/148 (14%), Positives = 53/148 (35%), Gaps = 18/148 (12%) Query: 68 AAPIIVAYHFNSDLARLQKAFPQGR----------TLDKDPCTIQEWNEGKIP--LLFAH 115 +++ L L + + ++ +N Sbjct: 1297 GHRVLIFSQMVKMLNLLAEFLKMRGYKHQRLDGTMAKEVRRKAMEHFNAKNSEDFCFLLS 1356 Query: 116 PASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNT 175 + G G+NL + ++ F W+ + Q R + G R V +Y L+ +++ Sbjct: 1357 TKAGGLGINLT-SADTVIIFDSDWNPQNDLQAEAR-----AHRIGQTRTVQIYRLVTKDS 1410 Query: 176 IDELVLQRLRTKSTIQDLLLNALKKETI 203 I++ +L+R + K + L++ L + + Sbjct: 1411 IEQTILERAKAKMVLDTLVVQGLNQRNV 1438 >gi|171680898|ref|XP_001905393.1| hypothetical protein [Podospora anserina S mat+] gi|170940407|emb|CAP65633.1| unnamed protein product [Podospora anserina S mat+] Length = 1112 Score = 95.8 bits (237), Expect = 3e-18, Method: Composition-based stats. Identities = 32/150 (21%), Positives = 56/150 (37%), Gaps = 17/150 (11%) Query: 56 IKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGR----------TLDKDPCTIQEWN 105 IK L + + +V F S L+ ++ A Q + ++E+ Sbjct: 948 IKKLRELRKGHPTIKSVVFSQFTSFLSLIEPALTQANMHFVRLDGSMSQKARAAVLEEFK 1007 Query: 106 EGK-IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA 164 E K +L + G GLNL + WW Q I+R+ + G + Sbjct: 1008 ESKRFTVLLLSLKAGGVGLNLTM-AKRVFMMDPWWSFAIEAQAIDRV-----HRMGQEDE 1061 Query: 165 VFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 V +Y I + +++E +L+ K I L Sbjct: 1062 VKIYRFIVKGSVEERMLKIQERKKLIASSL 1091 >gi|322707181|gb|EFY98760.1| TBP associated factor (Mot1), putative [Metarhizium anisopliae ARSEF 23] Length = 1895 Score = 95.8 bits (237), Expect = 3e-18, Method: Composition-based stats. Identities = 36/199 (18%), Positives = 72/199 (36%), Gaps = 45/199 (22%) Query: 37 NGAVYYDEEKHWKE--------VHDEKIKALEVII-----------------EKANAAPI 71 VY D +K + +H K+ AL+ ++ + Sbjct: 1616 GTPVYDDTQKILQRQGTSIEDTIHAPKLTALKDLLVDCGIGGDDGDTNDPLYQPIKPHRA 1675 Query: 72 IVAYHFNSDLARLQK-------------AFPQGRTLDKDPCTIQEWN-EGKIPLLFAHPA 117 ++ L ++K +K + ++N + +L + Sbjct: 1676 LIFCQMKEMLDMVEKKVLKELLPSVSHLRLDGSVEANKRQDIVNKFNSDPSYDVLLLTTS 1735 Query: 118 SCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 G GLNL G + ++F W+ ++ Q ++R + G K+ V VY LI + T++ Sbjct: 1736 VGGLGLNLT-GADTVIFVEHDWNPQKDLQAMDR-----AHRIGQKKVVNVYRLITRGTLE 1789 Query: 178 ELVLQRLRTKSTIQDLLLN 196 E +L R K + ++N Sbjct: 1790 EKILSLQRFKIDVASTVVN 1808 >gi|322698448|gb|EFY90218.1| TBP associated factor (Mot1), putative [Metarhizium acridum CQMa 102] Length = 1893 Score = 95.8 bits (237), Expect = 3e-18, Method: Composition-based stats. Identities = 36/199 (18%), Positives = 72/199 (36%), Gaps = 45/199 (22%) Query: 37 NGAVYYDEEKHWKE--------VHDEKIKALEVII-----------------EKANAAPI 71 VY D +K + +H K+ AL+ ++ + Sbjct: 1614 GTPVYDDTQKILQRQGTSIEDTIHAPKLTALKDLLVDCGIGGDDGDTNDPLYQPIKPHRA 1673 Query: 72 IVAYHFNSDLARLQK-------------AFPQGRTLDKDPCTIQEWN-EGKIPLLFAHPA 117 ++ L ++K +K + ++N + +L + Sbjct: 1674 LIFCQMKEMLDMVEKKVLKELLPSVSHLRLDGSVEANKRQDIVNKFNSDPSYDVLLLTTS 1733 Query: 118 SCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 G GLNL G + ++F W+ ++ Q ++R + G K+ V VY LI + T++ Sbjct: 1734 VGGLGLNLT-GADTVIFVEHDWNPQKDLQAMDR-----AHRIGQKKVVNVYRLITRGTLE 1787 Query: 178 ELVLQRLRTKSTIQDLLLN 196 E +L R K + ++N Sbjct: 1788 EKILSLQRFKIDVASTVVN 1806 >gi|134079366|emb|CAK96995.1| unnamed protein product [Aspergillus niger] Length = 910 Score = 95.8 bits (237), Expect = 3e-18, Method: Composition-based stats. Identities = 30/171 (17%), Positives = 66/171 (38%), Gaps = 19/171 (11%) Query: 40 VYYDEEKHW-KEVHDEKIKALEVIIE-KANAAPIIVAYHFNSDLARLQ----------KA 87 +Y + K + KI+ L I+ +++ IV F S L +++ Sbjct: 659 IYLNAGDDDNKILPSTKIRRLMKILRRESSDHKFIVFSVFTSMLDKIEPFLKRTGIGYAR 718 Query: 88 FPQGRTLDKDPCTIQEW-NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 + G D ++ + N +L + GLNL + +V +W+ +Q Sbjct: 719 YDGGMRNDHREASLNKLRNNSGTRVLLCSLRAGALGLNLT-AASRVVILEPFWNPFVEEQ 777 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 I+R+ + V +Y +I + T++E ++ K + ++ + Sbjct: 778 AIDRV-----HRLNQTVDVKIYKMIIKGTVEERIIDLQDRKRELANVTIEG 823 >gi|212527854|ref|XP_002144084.1| TBP associated factor (Mot1), putative [Penicillium marneffei ATCC 18224] gi|210073482|gb|EEA27569.1| TBP associated factor (Mot1), putative [Penicillium marneffei ATCC 18224] Length = 1894 Score = 95.8 bits (237), Expect = 3e-18, Method: Composition-based stats. Identities = 39/209 (18%), Positives = 73/209 (34%), Gaps = 30/209 (14%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEV 61 KQY Q+ Y + +I + A K L D + ++ Sbjct: 1617 KQYDDVQK--YLSAKNSHIRDISHAPKLTALRDL-----LIDCGIGVDPNTEGELDTGAS 1669 Query: 62 IIEKANAAPIIVAYHFNSDLARLQK-------------AFPQGRTLDKDPCTIQEWN-EG 107 + +V L +Q+ K + ++N + Sbjct: 1670 YVSP---HRALVFCQMKEMLDIVQEDVLKKMLPSVQYLRLDGSVEATKRQNIVNQFNTDP 1726 Query: 108 KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFV 167 +L + G GLNL G + ++F W+ ++ Q ++R + G K+ V V Sbjct: 1727 SYDVLLLTTSVGGLGLNLT-GADTVIFVEHDWNPQKDIQAMDR-----AHRIGQKKVVNV 1780 Query: 168 YYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 Y LI + T++E +L R K + ++N Sbjct: 1781 YRLITRGTLEEKILSLQRFKIDVASTVVN 1809 >gi|302508605|ref|XP_003016263.1| hypothetical protein ARB_05661 [Arthroderma benhamiae CBS 112371] gi|291179832|gb|EFE35618.1| hypothetical protein ARB_05661 [Arthroderma benhamiae CBS 112371] Length = 1904 Score = 95.8 bits (237), Expect = 3e-18, Method: Composition-based stats. Identities = 34/164 (20%), Positives = 67/164 (40%), Gaps = 18/164 (10%) Query: 34 QLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRT 93 +LA GA Y + ++K + I++ ++ + F Sbjct: 1674 ELATGASYVSPHRALIF---CQMKEMLDIVQNDVLRKLLPSVQFL--------RLDGSVE 1722 Query: 94 LDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIG 152 K + ++N + +L + G GLNL G + ++F W+ ++ Q ++R Sbjct: 1723 ATKRQNIVNQFNTDPSYDVLLLTTSVGGLGLNLT-GADTVIFVEHDWNPQKDIQAMDR-- 1779 Query: 153 VTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + G K+ V VY LI + T++E +L R K + ++N Sbjct: 1780 ---AHRIGQKKVVNVYRLITRGTLEEKILNLQRFKIDVASTVVN 1820 >gi|301100782|ref|XP_002899480.1| ATP-dependent helicase, putative [Phytophthora infestans T30-4] gi|262103788|gb|EEY61840.1| ATP-dependent helicase, putative [Phytophthora infestans T30-4] Length = 878 Score = 95.8 bits (237), Expect = 3e-18, Method: Composition-based stats. Identities = 28/161 (17%), Positives = 65/161 (40%), Gaps = 19/161 (11%) Query: 51 VHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARL---------QKAFPQGRT-LDKDP 98 + K L ++ + +++ + L L + G T + + Sbjct: 688 LASAKFDYLRTLLPNLQKDGHRVLIFSQWTKLLDLLEVLMSHMEYRYLRLDGSTDVQERQ 747 Query: 99 CTIQEWNEGK-IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 I +NE K I + + G G+NL + ++ L ++ +Q +R Sbjct: 748 GLIDTYNEDKNIFVFLLSTRAGGLGINLT-AADTVILHDLDFNPTADEQACDRC-----H 801 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNAL 198 + G + V +Y L+++NT+D+ + + +K+ + +L+ L Sbjct: 802 RIGQTKPVSIYKLVSENTVDQDIYKLGESKTELNHKILDKL 842 >gi|312217656|emb|CBX97603.1| similar to helicase swr1 [Leptosphaeria maculans] Length = 1692 Score = 95.8 bits (237), Expect = 3e-18, Method: Composition-based stats. Identities = 30/166 (18%), Positives = 67/166 (40%), Gaps = 19/166 (11%) Query: 44 EEKHWKEVHDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAF---------PQGR 92 +K + K++ L ++ +A ++ L L++ G Sbjct: 1372 PDKRLLQYDCGKLQRLATLLRDLEAGGHRALIFTQMTKVLDILEQFLNIHGHRYLRLDGS 1431 Query: 93 TLDKDPCTI-QEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 T + + +N + KI S G G+NL G + ++F+ L W+ +++ Sbjct: 1432 TKIEQRQILTDRFNSDPKILAFILSSRSGGLGINLT-GADTVIFYDLDWN-----PAMDK 1485 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 R + G R V +Y +++ TI+ +L++ K + D+++ Sbjct: 1486 QCQDRAHRIGQTRDVHIYKFVSEYTIEANILRKSNQKRLLDDVIIQ 1531 >gi|221487102|gb|EEE25348.1| chromodomain helicase DNA binding protein, putative [Toxoplasma gondii GT1] Length = 2325 Score = 95.8 bits (237), Expect = 3e-18, Method: Composition-based stats. Identities = 22/148 (14%), Positives = 53/148 (35%), Gaps = 18/148 (12%) Query: 68 AAPIIVAYHFNSDLARLQKAFPQGR----------TLDKDPCTIQEWNEGKIP--LLFAH 115 +++ L L + + ++ +N Sbjct: 1297 GHRVLIFSQMVKMLNLLAEFLKMRGYKHQRLDGTMAKEVRRKAMEHFNAKNSEDFCFLLS 1356 Query: 116 PASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNT 175 + G G+NL + ++ F W+ + Q R + G R V +Y L+ +++ Sbjct: 1357 TKAGGLGINLT-SADTVIIFDSDWNPQNDLQAEAR-----AHRIGQTRTVQIYRLVTKDS 1410 Query: 176 IDELVLQRLRTKSTIQDLLLNALKKETI 203 I++ +L+R + K + L++ L + + Sbjct: 1411 IEQTILERAKAKMVLDTLVVQGLNQRNV 1438 >gi|296813699|ref|XP_002847187.1| ATP-dependent helicase RIS1 [Arthroderma otae CBS 113480] gi|238842443|gb|EEQ32105.1| ATP-dependent helicase RIS1 [Arthroderma otae CBS 113480] Length = 1044 Score = 95.8 bits (237), Expect = 3e-18, Method: Composition-based stats. Identities = 37/207 (17%), Positives = 72/207 (34%), Gaps = 33/207 (15%) Query: 3 QYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVI 62 +Y + E+ D +G EA + A++ KI+ L I Sbjct: 775 EYEEDATEIVTDEEGGEDEAD--------LSESMPSAIHD-------VQTSAKIRHLMRI 819 Query: 63 IEKANAA-PIIVAYHFNSDLARLQKAFPQG-----------RTLDKDPCTIQEWNEGKIP 110 +++ + IV F S L +++ G R ++ + N Sbjct: 820 LKRESGEFKFIVFSVFTSMLDKIEPFLKNGGIGYARYDGGMRNDLREASLNRLRNSSGTR 879 Query: 111 LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYL 170 +L + GLNL + +V +W+ +Q I+R+ + V VY L Sbjct: 880 VLLCSLRAGSLGLNLT-AASRVVILEPFWNPFVEEQAIDRV-----HRLNQTVDVKVYKL 933 Query: 171 IAQNTIDELVLQRLRTKSTIQDLLLNA 197 + T++E +L+ K + + Sbjct: 934 TIKGTVEERILELQERKRELAKSTIEG 960 >gi|225556696|gb|EEH04984.1| transcriptional accessory protein [Ajellomyces capsulatus G186AR] Length = 1984 Score = 95.8 bits (237), Expect = 3e-18, Method: Composition-based stats. Identities = 42/209 (20%), Positives = 76/209 (36%), Gaps = 30/209 (14%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEV 61 KQY + Q+ L +I A K + L D + ++ Sbjct: 1706 KQYDEIQKSLAAK--NSHIRDVAHAPKLIALRDL-----LVDCGIGVDPSTEGELDTGAS 1758 Query: 62 IIEKANAAPIIVAYHFNSDLAR-----LQKAFPQGRTLD--------KDPCTIQEWN-EG 107 + +V L L+K P + L K + ++N + Sbjct: 1759 YVSP---HRALVFCQMKEMLDIVQNDVLKKLLPSVQFLRLDGSVEATKRQSIVNQFNTDP 1815 Query: 108 KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFV 167 +L + G GLNL G + ++F W+ ++ Q ++R + G K+ V V Sbjct: 1816 SYDVLLLTTSVGGLGLNLT-GADTVIFVEHDWNPQKDIQAMDR-----AHRIGQKKVVNV 1869 Query: 168 YYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 Y LI + T++E +L R K + ++N Sbjct: 1870 YRLITRGTLEEKILNLQRFKIDVASTVVN 1898 >gi|321263831|ref|XP_003196633.1| chromatin structure remodeling complex protein STH1 [Cryptococcus gattii WM276] gi|317463110|gb|ADV24846.1| Chromatin structure remodeling complex protein STH1, putative [Cryptococcus gattii WM276] Length = 1430 Score = 95.8 bits (237), Expect = 3e-18, Method: Composition-based stats. Identities = 46/231 (19%), Positives = 80/231 (34%), Gaps = 33/231 (14%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQL--ANGAVYY----DEEKHWKEVHDE- 54 K Y Q+ + + +QL Y DE+ DE Sbjct: 819 KLYESVQKYKTLPTDMSVAKPQKRQNLQNALMQLRKICNHPYVFREVDEDFTVGNTTDEQ 878 Query: 55 ------KIKALEVIIEKA--NAAPIIVAYHFN---------SDLARLQKAFPQGRTLDKD 97 K + L+ I+ K +++ + D + G T +D Sbjct: 879 IIRVAGKFELLDRILPKLFKTGHKVLIFFQMTEIMTIVSDFFDYRGWKYCRLDGSTKAED 938 Query: 98 PCTI-QEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 T+ +N+ P + + G GLNLQ + ++ + W+ Q Sbjct: 939 RQTLLSTFNDPNSPYQVFILSTRAGGLGLNLQ-SADTVIIYDTDWNPHADLQA-----QD 992 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIHV 205 R + G K+ V V LI+ T++ELVL R + K I ++ A K + + Sbjct: 993 RAHRIGQKKEVRVLRLISSGTVEELVLARAQRKLEIDGKVIQAGKFDEVTT 1043 >gi|294925769|ref|XP_002779000.1| Chromodomain helicase-DNA-binding protein, putative [Perkinsus marinus ATCC 50983] gi|239887846|gb|EER10795.1| Chromodomain helicase-DNA-binding protein, putative [Perkinsus marinus ATCC 50983] Length = 1042 Score = 95.8 bits (237), Expect = 3e-18, Method: Composition-based stats. Identities = 31/172 (18%), Positives = 61/172 (35%), Gaps = 20/172 (11%) Query: 39 AVYYDEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQK---------- 86 D+E + + K+ L+ ++ K A +++ F S L +Q+ Sbjct: 582 CQNKDQEFNRMIMASGKMVLLDKLLPKLHAEGHKVLLFSQFLSMLDLIQRYALYRGYSVE 641 Query: 87 AFPQGRTLDKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEH 144 T I +N + L + G G+NL ++++ F W+ + Sbjct: 642 RLDGSATAKAREEAIDRFNTPESSAFLFLLSTRAGGIGINLT-AADVVIIFDSDWNPQMD 700 Query: 145 QQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 Q R + G + V VY L+ T + + +R K I + + Sbjct: 701 IQATAR-----AHRIGQTKDVKVYRLVTNRTYEAQMFERASQKLGINEAVFQ 747 >gi|70951871|ref|XP_745142.1| DNA repair protein rad54 [Plasmodium chabaudi chabaudi] gi|56525372|emb|CAH78699.1| DNA repair protein rad54, putative [Plasmodium chabaudi chabaudi] Length = 1032 Score = 95.8 bits (237), Expect = 3e-18, Method: Composition-based stats. Identities = 31/157 (19%), Positives = 62/157 (39%), Gaps = 20/157 (12%) Query: 53 DEKIKALEVI---IEKANAAPIIVAYHFNSDLARLQ----------KAFPQGRTLDKDPC 99 K + L + I++ +++ ++ L ++ G ++ K Sbjct: 537 SSKFQLLHFLLKTIKQDTNDKVVIVSNYTQTLDYMEILCKENHYKFVRLDGGISIKKRHK 596 Query: 100 TIQEW-NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQ 158 I ++ N I + S G G+NL N L+ W+ +Q + R+ + Sbjct: 597 VISDFTNTDDIFIFLLSSKSGGCGINL-ISSNRLILLDPDWNPANDKQALARVW-----R 650 Query: 159 AGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 G K+ ++Y L TIDE V QR +K + +++ Sbjct: 651 EGQKKICYIYRLFCTGTIDEKVYQRQISKDGLSSMIV 687 >gi|240281557|gb|EER45060.1| transcriptional accessory protein [Ajellomyces capsulatus H143] Length = 1913 Score = 95.8 bits (237), Expect = 3e-18, Method: Composition-based stats. Identities = 42/209 (20%), Positives = 76/209 (36%), Gaps = 30/209 (14%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEV 61 KQY + Q+ L +I A K + L D + ++ Sbjct: 1635 KQYDEIQKSLAAK--NSHIRDVAHAPKLIALRDL-----LVDCGIGVDPSTEGELDTGAS 1687 Query: 62 IIEKANAAPIIVAYHFNSDLAR-----LQKAFPQGRTLD--------KDPCTIQEWN-EG 107 + +V L L+K P + L K + ++N + Sbjct: 1688 YVSP---HRALVFCQMKEMLDIVQNDVLKKLLPSVQFLRLDGSVEATKRQSIVNQFNTDP 1744 Query: 108 KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFV 167 +L + G GLNL G + ++F W+ ++ Q ++R + G K+ V V Sbjct: 1745 SYDVLLLTTSVGGLGLNLT-GADTVIFVEHDWNPQKDIQAMDR-----AHRIGQKKVVNV 1798 Query: 168 YYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 Y LI + T++E +L R K + ++N Sbjct: 1799 YRLITRGTLEEKILNLQRFKIDVASTVVN 1827 >gi|302496981|ref|XP_003010491.1| hypothetical protein ARB_03192 [Arthroderma benhamiae CBS 112371] gi|291174034|gb|EFE29851.1| hypothetical protein ARB_03192 [Arthroderma benhamiae CBS 112371] Length = 1504 Score = 95.8 bits (237), Expect = 3e-18, Method: Composition-based stats. Identities = 31/167 (18%), Positives = 63/167 (37%), Gaps = 22/167 (13%) Query: 36 ANGAVYYDEEKHWKEVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQKAFPQGRT 93 A G+ +++ K+ L+ ++ K + +++ L L R Sbjct: 730 AGGSTRREDQLKALVTSSGKMMVLDQLLTKLKNDGHRVLIFSQMVRMLNILANYM-DARG 788 Query: 94 LDKDPCT-----------IQEWNE-GKIPL-LFAHPASCGHGLNLQYGGNILVFFSLWWD 140 + I+ +N G + G G+NL + ++ F W+ Sbjct: 789 FNYQRLDGTIAAGPRRLAIEHYNAPGSTDFTFLLSTRAGGLGINLMT-ADTVILFDSDWN 847 Query: 141 LEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTK 187 + Q + R + G + V VY L++++T++E VL+R R K Sbjct: 848 PQADLQAMAR-----AHRIGQTKPVSVYRLVSKDTVEEEVLERARNK 889 >gi|327307624|ref|XP_003238503.1| TBP associated factor Mot1 [Trichophyton rubrum CBS 118892] gi|326458759|gb|EGD84212.1| TBP associated factor Mot1 [Trichophyton rubrum CBS 118892] Length = 1903 Score = 95.8 bits (237), Expect = 3e-18, Method: Composition-based stats. Identities = 34/164 (20%), Positives = 67/164 (40%), Gaps = 18/164 (10%) Query: 34 QLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRT 93 +LA GA Y + ++K + I++ ++ + F Sbjct: 1673 ELATGASYVSPHRALIF---CQMKEMLDIVQNDVLRKLLPSVQFL--------RLDGSVE 1721 Query: 94 LDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIG 152 K + ++N + +L + G GLNL G + ++F W+ ++ Q ++R Sbjct: 1722 ATKRQNIVNQFNTDPSYDVLLLTTSVGGLGLNLT-GADTVIFVEHDWNPQKDIQAMDR-- 1778 Query: 153 VTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + G K+ V VY LI + T++E +L R K + ++N Sbjct: 1779 ---AHRIGQKKVVNVYRLITRGTLEEKILNLQRFKIDVASTVVN 1819 >gi|121708636|ref|XP_001272197.1| SNF2 family helicase/ATPase, putative [Aspergillus clavatus NRRL 1] gi|119400345|gb|EAW10771.1| SNF2 family helicase/ATPase, putative [Aspergillus clavatus NRRL 1] Length = 1121 Score = 95.8 bits (237), Expect = 3e-18, Method: Composition-based stats. Identities = 40/231 (17%), Positives = 88/231 (38%), Gaps = 43/231 (18%) Query: 6 KFQRELYCDLQGENIEAFNSAS--------KTVKCLQLAN-------------GAVYYDE 44 + Q + Y + ++I+A N A+ +QL G Y + Sbjct: 434 EMQIKWYQKILEKDIDAVNGAAGKRESKTRLLNIVMQLRKCCNHPYLFEGAEPGPPYTTD 493 Query: 45 EKHWKEVHDEKIKALEVIIEKAN--AAPIIVAYHFNSDLARL---------QKAFPQGRT 93 E + K+ L+ ++ + + +++ + L L + G T Sbjct: 494 EHLV--FNSGKMVILDKLLARMQRQGSRVLIFSQMSRVLDILEDYCVFRDYKYCRIDGTT 551 Query: 94 LDKDP-CTIQEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 +D I ++N+ + + + G G+NL +I+V + W+ + Q ++R Sbjct: 552 AHEDRIAAIDDYNKPGSEKFIFLLTTRAGGLGINLTT-ADIVVLYDSDWNPQADLQAMDR 610 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 + G + V V+ I ++ I+E VL+R K + L++ + + Sbjct: 611 -----AHRIGQTKQVVVFRFITEDAIEEKVLERAAQKLRLDQLVIQQGRAQ 656 >gi|146415248|ref|XP_001483594.1| hypothetical protein PGUG_04323 [Meyerozyma guilliermondii ATCC 6260] Length = 1367 Score = 95.8 bits (237), Expect = 3e-18, Method: Composition-based stats. Identities = 28/159 (17%), Positives = 61/159 (38%), Gaps = 20/159 (12%) Query: 52 HDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARL----------QKAFPQGRTLDKDPC 99 K+ LE ++ + +++ L L + G + Sbjct: 641 SSGKMVLLEQLLTRLRKEGHRVLIFSQMVRMLDILGDYLSIKGYAFQRLDGGIPSSQRRI 700 Query: 100 TIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 +I +N + + G G+NL + ++ F W+ + Q + R Sbjct: 701 SIDHFNAPDSRDFVFLLSTRAGGLGINLMT-ADTVIIFDSDWNPQADLQAMAR-----AH 754 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + G K V VY ++++TI+E +L+R R K ++ +++ Sbjct: 755 RIGQKNHVSVYRFVSKDTIEEEILERARKKMILEYAIIS 793 >gi|255930267|ref|XP_002556693.1| Pc06g00840 [Penicillium chrysogenum Wisconsin 54-1255] gi|211581306|emb|CAP79077.1| Pc06g00840 [Penicillium chrysogenum Wisconsin 54-1255] Length = 978 Score = 95.8 bits (237), Expect = 3e-18, Method: Composition-based stats. Identities = 32/168 (19%), Positives = 64/168 (38%), Gaps = 22/168 (13%) Query: 45 EKHWKEVHDEKIKALEVIIEKA---NAAPIIVAYHFNSDLARLQK----------AFPQG 91 +H KI+ L+ +++ I++ ++ S L+ L Sbjct: 610 HRHLSPSSSAKIRVLDQLLDTMRSKTDEKIVLVSNYTSTLSLLATLLTSLGLPYLRLDGS 669 Query: 92 RTLDKDPCTIQEWN---EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMI 148 K + ++N + G GLNL G + L+ F + W+ Q + Sbjct: 670 TPAQKRQGLVDDFNRLPASSCFAFLLSAKAGGTGLNL-IGASRLILFDVDWNPATDIQAM 728 Query: 149 ERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 RI + G KR +Y ++ + +++E + QR TK + D ++ Sbjct: 729 ARI-----HRDGQKRPCRIYRILLKGSLEEKIWQRQVTKLGLADSVMQ 771 >gi|294891224|ref|XP_002773482.1| chromodomain helicase dna binding protein, putative [Perkinsus marinus ATCC 50983] gi|239878635|gb|EER05298.1| chromodomain helicase dna binding protein, putative [Perkinsus marinus ATCC 50983] Length = 994 Score = 95.8 bits (237), Expect = 4e-18, Method: Composition-based stats. Identities = 31/172 (18%), Positives = 61/172 (35%), Gaps = 20/172 (11%) Query: 39 AVYYDEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQK---------- 86 D+E + + K+ L+ ++ K A +++ F S L +Q+ Sbjct: 583 CQNKDQEFNRMIMASGKMVLLDKLLPKLHAEGHKVLLFSQFLSMLDLIQRYALYRGYSVE 642 Query: 87 AFPQGRTLDKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEH 144 T I +N + L + G G+NL ++++ F W+ + Sbjct: 643 RLDGSATAKAREEAIDRFNTPESSAFLFLLSTRAGGIGINLT-AADVVIIFDSDWNPQMD 701 Query: 145 QQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 Q R + G + V VY L+ T + + +R K I + + Sbjct: 702 IQATAR-----AHRIGQTKDVKVYRLVTNRTYEAQMFERASQKLGINEAVFQ 748 >gi|67609421|ref|XP_666977.1| chromodomain-helicase-DNA-binding protein, CHD-1-related [Cryptosporidium hominis TU502] gi|54658055|gb|EAL36743.1| chromodomain-helicase-DNA-binding protein, CHD-1-related [Cryptosporidium hominis] Length = 2025 Score = 95.8 bits (237), Expect = 4e-18, Method: Composition-based stats. Identities = 24/158 (15%), Positives = 60/158 (37%), Gaps = 20/158 (12%) Query: 55 KIKALEVIIEKA--NAAPIIVAYHFNSDLARLQ----------KAFPQGRTLDKDPCTIQ 102 K+ L+ ++ + + +++ L + + + + Sbjct: 871 KLCLLDKLLSRLREKGSRVLIFSQMVRMLNIISEFLVLRGFRHQRLDGTMGKELRKKAMD 930 Query: 103 EWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 +N + G G+NL + ++ + W+ + Q R + G Sbjct: 931 HFNSPNSDDFCFLLSTKAGGLGINLTT-ADTVIIYDSDWNPQNDLQAEAR-----AHRIG 984 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNAL 198 K+ V +Y L+ +++I+E +L+R +TK + L++ L Sbjct: 985 QKKQVQIYRLVTKDSIEENILERAKTKMVLDTLVVQGL 1022 >gi|302660586|ref|XP_003021971.1| hypothetical protein TRV_03919 [Trichophyton verrucosum HKI 0517] gi|291185893|gb|EFE41353.1| hypothetical protein TRV_03919 [Trichophyton verrucosum HKI 0517] Length = 1500 Score = 95.8 bits (237), Expect = 4e-18, Method: Composition-based stats. Identities = 31/167 (18%), Positives = 63/167 (37%), Gaps = 22/167 (13%) Query: 36 ANGAVYYDEEKHWKEVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQKAFPQGRT 93 A G+ +++ K+ L+ ++ K + +++ L L R Sbjct: 730 AGGSTRREDQLKALVTSSGKMMVLDQLLTKLKNDGHRVLIFSQMVRMLNILANYM-DARG 788 Query: 94 LDKDPCT-----------IQEWNE-GKIPL-LFAHPASCGHGLNLQYGGNILVFFSLWWD 140 + I+ +N G + G G+NL + ++ F W+ Sbjct: 789 FNYQRLDGTIAAGPRRLAIEHYNAPGSTDFTFLLSTRAGGLGINLMT-ADTVILFDSDWN 847 Query: 141 LEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTK 187 + Q + R + G + V VY L++++T++E VL+R R K Sbjct: 848 PQADLQAMAR-----AHRIGQTKPVSVYRLVSKDTVEEEVLERARNK 889 >gi|123977054|ref|XP_001330700.1| Type III restriction enzyme, res subunit family protein [Trichomonas vaginalis G3] gi|121897443|gb|EAY02564.1| Type III restriction enzyme, res subunit family protein [Trichomonas vaginalis G3] Length = 822 Score = 95.8 bits (237), Expect = 4e-18, Method: Composition-based stats. Identities = 31/185 (16%), Positives = 69/185 (37%), Gaps = 19/185 (10%) Query: 32 CLQLANGAVYYDEEK-HWKEVHDEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQK-- 86 ++ N +DE+K K K L I+ + + ++ L+ L++ Sbjct: 460 LQEICNHPNIFDEQKYSTNPKMSCKTKLLMKILPQWHKEGHRCLLFAQSLKMLSILEEIM 519 Query: 87 --------AFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLW 138 ++ + +N G G G+NL G + ++ Sbjct: 520 TNLNLEFFRMDGDTPPERRIVIMDRFNHGDKFACLLSKKVGGLGINLT-GADRVIIIEPD 578 Query: 139 WDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNAL 198 W+ +Q +ER + G ++V VY LI TI+E + ++ K + + ++ Sbjct: 579 WNPSTDEQALER-----AYRIGQTKSVSVYRLICVGTIEEKIYKKQIFKQILSNTIMQDA 633 Query: 199 KKETI 203 +++ + Sbjct: 634 RQKRL 638 >gi|308486424|ref|XP_003105409.1| CRE-ROM-4 protein [Caenorhabditis remanei] gi|308256514|gb|EFP00467.1| CRE-ROM-4 protein [Caenorhabditis remanei] Length = 1512 Score = 95.8 bits (237), Expect = 4e-18, Method: Composition-based stats. Identities = 26/106 (24%), Positives = 49/106 (46%), Gaps = 9/106 (8%) Query: 96 KDPCTIQEWNEGK--IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGV 153 ++ +N+ + + + G GLNL G + L+ + W+ QQ + RI Sbjct: 37 DRQKLVRHFNDNRDASNVFLLSTKAGGVGLNL-IGASRLILYDSDWNPANDQQAMARIW- 94 Query: 154 TRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 + G R +Y LI TI+E +LQR K+ + +++A++ Sbjct: 95 ----RDGQVRPCHIYRLITTGTIEEKMLQRQIKKTGL-GCVIDAIE 135 >gi|302916021|ref|XP_003051821.1| chromatin remodeling complex SWI/SNF, component SWI2 and related ATPase [Nectria haematococca mpVI 77-13-4] gi|256732760|gb|EEU46108.1| chromatin remodeling complex SWI/SNF, component SWI2 and related ATPase [Nectria haematococca mpVI 77-13-4] Length = 1427 Score = 95.4 bits (236), Expect = 4e-18, Method: Composition-based stats. Identities = 40/225 (17%), Positives = 89/225 (39%), Gaps = 33/225 (14%) Query: 2 KQYHKF---QRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHD----- 53 K Y + + + D +G A ++ ++ +L N +D ++ Sbjct: 808 KLYKQMVTHNKLVVSDGKGGKTGARGLSNMIMQLRKLCNHPFVFDVVENVMNPLSISNDL 867 Query: 54 -----EKIKALEVIIE--KANAAPIIVAYHFNSDLA---------RLQKAFPQGRTL-DK 96 K + L+ I+ +A+ +++ + + + R++ G T D+ Sbjct: 868 LWRTAGKFELLDRILPKYQASGHRVLMFFQMTAIMDIMEDYLRYKRVEYLRLDGTTKSDE 927 Query: 97 DPCTIQEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 ++E+N K + + G GLNLQ + ++ + W+ + Q Sbjct: 928 RSDLLREFNAPDSKYFMFLLSTRAGGLGLNLQT-ADTVIIYDSDWNPHQDLQA-----QD 981 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 R + G K V + LI+ N+++E +L+R R K + ++ A + Sbjct: 982 RAHRIGQKNEVRILRLISSNSVEEKILERARFKLDMDGKVIQAGR 1026 >gi|219110183|ref|XP_002176843.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1] gi|217411378|gb|EEC51306.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1] Length = 509 Score = 95.4 bits (236), Expect = 4e-18, Method: Composition-based stats. Identities = 30/164 (18%), Positives = 62/164 (37%), Gaps = 19/164 (11%) Query: 51 VHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQKAFPQ----------GRTLDKDP 98 K K L I+ I++ + S L L Q +++ Sbjct: 305 FSSAKCKRLRAILPDLVGKGHRILIFSVWTSCLDLLSCLMEQMGLGYLRMEGSTPVNERQ 364 Query: 99 CTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 I + E IP+ +CG G+NL + + L ++ Q +R Sbjct: 365 ALIDRFTSETSIPVFLLSTKACGLGINLTC-ADTCIMHDLDFNPFNDLQAEDRC-----H 418 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 + G K+ V + +I ++T+DE + + + K+ + +++ +E Sbjct: 419 RIGQKKPVKIIKMITEDTVDEDIYKMQQRKARMNAAIMDTDSRE 462 >gi|68468949|ref|XP_721533.1| hypothetical protein CaO19.3035 [Candida albicans SC5314] gi|68469498|ref|XP_721262.1| hypothetical protein CaO19.10553 [Candida albicans SC5314] gi|46443171|gb|EAL02455.1| hypothetical protein CaO19.10553 [Candida albicans SC5314] gi|46443453|gb|EAL02735.1| hypothetical protein CaO19.3035 [Candida albicans SC5314] Length = 1410 Score = 95.4 bits (236), Expect = 4e-18, Method: Composition-based stats. Identities = 28/162 (17%), Positives = 60/162 (37%), Gaps = 20/162 (12%) Query: 49 KEVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARL----------QKAFPQGRTLDK 96 + K+ LE ++ + +++ L L + K Sbjct: 669 IVMSSGKMVLLEQLLSRLRKEGHRVLIFSQMVRMLDILGDYMFIKGYQFQRLDGTVPSSK 728 Query: 97 DPCTIQEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 I +N K + G G+NL + ++ F W+ + Q + R Sbjct: 729 RKIAIDHFNAPGSKDFAFLLSTRAGGLGINLMT-ADTVIIFDSDWNPQADLQAMAR---- 783 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + G K V VY ++++T++E +L+R R K ++ +++ Sbjct: 784 -AHRIGQKNHVSVYRFVSKDTVEEQILERARKKMVLEYAIIS 824 >gi|255729544|ref|XP_002549697.1| chromatin remodelling complex ATPase chain ISW1 [Candida tropicalis MYA-3404] gi|240132766|gb|EER32323.1| chromatin remodelling complex ATPase chain ISW1 [Candida tropicalis MYA-3404] Length = 1024 Score = 95.4 bits (236), Expect = 4e-18, Method: Composition-based stats. Identities = 42/225 (18%), Positives = 88/225 (39%), Gaps = 43/225 (19%) Query: 7 FQRELYCDLQGENIEAFNSAS--------KTVKCLQ-------------LANGAVYYDEE 45 Q+ LY + ++I+A N ++ +Q + G Y +E Sbjct: 374 MQKNLYKKILEKDIDAVNGSNGKKESKTRLLNIVMQLRKCCNHPYLFEGMEPGPPYTTDE 433 Query: 46 KHWKEVHDEKIKALEVIIE--KANAAPIIVAYHFNSDLARL---------QKAFPQGRTL 94 + +K+ L+ +++ + + +++ + L L Q G+T Sbjct: 434 HLV--FNSQKMLILDQMLKKFQQEGSRVLIFSQMSRMLDILEDYCYFREYQYCRIDGQTE 491 Query: 95 DKDP-CTIQEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERI 151 D I E+N+ + + + G G+NL +I++ F W+ + Q ++R Sbjct: 492 HSDRINAIDEYNKPGSEKFVFLLTTRAGGLGINLTT-ADIVILFDSDWNPQADLQAMDR- 549 Query: 152 GVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + G + V V+ I +N I+E VL+R K + L++ Sbjct: 550 ----AHRIGQTKQVKVFRFITENAIEEKVLERATQKLRLDQLVIQ 590 >gi|294933057|ref|XP_002780576.1| Chromatin remodelling complex ATPase chain Iswi, putative [Perkinsus marinus ATCC 50983] gi|239890510|gb|EER12371.1| Chromatin remodelling complex ATPase chain Iswi, putative [Perkinsus marinus ATCC 50983] Length = 1003 Score = 95.4 bits (236), Expect = 4e-18, Method: Composition-based stats. Identities = 38/211 (18%), Positives = 80/211 (37%), Gaps = 33/211 (15%) Query: 14 DLQGENIEAFNSASKTVKCLQ-------LANGAVYYDEEKHWKEVHDEKIKALEVIIEKA 66 L G + N+ + KC + G Y+D W+ + K++ ++ ++E+ Sbjct: 264 SLSGHKMRLLNTLMQLRKCCNHPYLFEGMEPGPPYFDGPHLWE--NSGKLRVVDKLLERL 321 Query: 67 ------NAAPIIVAYHFNSDLA------RLQK----AFPQGRTLDKDPCTIQEWNEGKIP 110 +++ L RL+ + I ++ Sbjct: 322 AVPGPQGKNQVLIFTQMTRMLDIMDDYLRLKGYGYCRIDGDTAMSDRQAMIDDFTRPDSD 381 Query: 111 --LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVY 168 + + G G+NL N ++ + ++ + Q I+R + G KR V VY Sbjct: 382 KFVFILSTRAGGLGINLNT-ANYVIIYDSDFNPQMDLQAIDR-----AHRIGQKRQVTVY 435 Query: 169 YLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 L+ Q+T++E +++R K I +L++ K Sbjct: 436 RLVTQDTVEEKIVERAAKKMQIDNLVIQKGK 466 >gi|238879188|gb|EEQ42826.1| chromo domain protein 1 [Candida albicans WO-1] Length = 1410 Score = 95.4 bits (236), Expect = 4e-18, Method: Composition-based stats. Identities = 28/162 (17%), Positives = 60/162 (37%), Gaps = 20/162 (12%) Query: 49 KEVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARL----------QKAFPQGRTLDK 96 + K+ LE ++ + +++ L L + K Sbjct: 669 IVMSSGKMVLLEQLLSRLRKEGHRVLIFSQMVRMLDILGDYMFIKGYQFQRLDGTVPSSK 728 Query: 97 DPCTIQEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 I +N K + G G+NL + ++ F W+ + Q + R Sbjct: 729 RKIAIDHFNAPGSKDFAFLLSTRAGGLGINLMT-ADTVIIFDSDWNPQADLQAMAR---- 783 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + G K V VY ++++T++E +L+R R K ++ +++ Sbjct: 784 -AHRIGQKNHVSVYRFVSKDTVEEQILERARKKMVLEYAIIS 824 >gi|218200575|gb|EEC83002.1| hypothetical protein OsI_28047 [Oryza sativa Indica Group] Length = 1235 Score = 95.4 bits (236), Expect = 4e-18, Method: Composition-based stats. Identities = 24/132 (18%), Positives = 51/132 (38%), Gaps = 17/132 (12%) Query: 70 PIIVAYHFNSDLAR---------LQKAFPQGR-TLDKDPCTIQEWN-EGKIPLLFAHPAS 118 IV + L +Q G +L+ ++++N + ++ ++ + Sbjct: 1082 KAIVFSQWTGMLDLLELSLNSNLIQYRRLDGTMSLNSRDKAVKDFNTDPEVRVMIMSLKA 1141 Query: 119 CGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDE 178 GLN+ ++ LWW+ Q I+R + G R V V L ++T+++ Sbjct: 1142 GNLGLNM-VAACHVILLDLWWNPYAEDQAIDR-----AHRIGQTRPVTVSRLTIKDTVED 1195 Query: 179 LVLQRLRTKSTI 190 +L K + Sbjct: 1196 RILALQEEKRAM 1207 >gi|297837353|ref|XP_002886558.1| hypothetical protein ARALYDRAFT_475211 [Arabidopsis lyrata subsp. lyrata] gi|297332399|gb|EFH62817.1| hypothetical protein ARALYDRAFT_475211 [Arabidopsis lyrata subsp. lyrata] Length = 1281 Score = 95.4 bits (236), Expect = 4e-18, Method: Composition-based stats. Identities = 27/134 (20%), Positives = 53/134 (39%), Gaps = 17/134 (12%) Query: 68 AAPIIVAYHFNSDLARLQKA----FPQGRTLDKD------PCTIQEWNE-GKIPLLFAHP 116 IV + L L+ + Q R LD +Q++N ++ ++ Sbjct: 1124 GEKAIVFSQWTKMLDLLEASLVSSHIQYRRLDGTMSVAARDKAVQDFNTLPEVTVMIMSL 1183 Query: 117 ASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTI 176 + GLN+ ++L+ LWW+ Q I+R + G R V V ++T+ Sbjct: 1184 KAASLGLNMVAACHVLML-DLWWNPTTEDQAIDR-----AHRIGQTRPVTVVRFTVKDTV 1237 Query: 177 DELVLQRLRTKSTI 190 ++ +L + K + Sbjct: 1238 EDRILALQQKKRMM 1251 >gi|156375431|ref|XP_001630084.1| predicted protein [Nematostella vectensis] gi|156217098|gb|EDO38021.1| predicted protein [Nematostella vectensis] Length = 1872 Score = 95.4 bits (236), Expect = 4e-18, Method: Composition-based stats. Identities = 29/142 (20%), Positives = 58/142 (40%), Gaps = 20/142 (14%) Query: 69 APIIVAYHFNSDLARLQ------------KAFPQGRTLDKDPCTI--QEWNEGKIPLLFA 114 +++ S L ++ G T +I + N+ I +L Sbjct: 1665 HRVLLFCQLKSMLDIVENDLFKTNMPSVTYLRLDGSTPAGSRHSIVHRFNNDPSIDVLLL 1724 Query: 115 HPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQN 174 G GLNL G + ++F W+ + Q ++R + G K+ V VY L+ + Sbjct: 1725 TTHVGGLGLNLT-GADTVIFVEHDWNPMKDLQAMDR-----AHRIGQKKVVNVYRLVTKG 1778 Query: 175 TIDELVLQRLRTKSTIQDLLLN 196 T++E ++ + K TI + +++ Sbjct: 1779 TLEEKIMGLQKFKMTIANTVIS 1800 >gi|260940993|ref|XP_002615336.1| hypothetical protein CLUG_04218 [Clavispora lusitaniae ATCC 42720] gi|238850626|gb|EEQ40090.1| hypothetical protein CLUG_04218 [Clavispora lusitaniae ATCC 42720] Length = 1269 Score = 95.4 bits (236), Expect = 4e-18, Method: Composition-based stats. Identities = 35/162 (21%), Positives = 68/162 (41%), Gaps = 20/162 (12%) Query: 52 HDEKIKALEVIIEK--ANAAPIIVAYHFNS------DLARLQ---KAFPQGRTLDKDPCT 100 K + L+ I+ K A+ +++ + S D RL+ G T +D Sbjct: 817 TSGKFELLDRILPKFKASGHKVLIFFQMTSVMNIFEDFLRLRDMNYLRLDGSTKAEDRQD 876 Query: 101 -IQEWNEGKIPLL--FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 ++ +N+ + + + G GLNLQ + ++ F W+ + Q R Sbjct: 877 MLKSFNKPESDIFCFLLSTRAGGLGLNLQ-SADTVIIFDTDWNPHQDLQA-----QDRAH 930 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 + G K V + LI ++++E++L+R K I ++ A K Sbjct: 931 RIGQKNEVRILRLITNDSVEEVILERAHQKLDIDGKVIQAGK 972 >gi|115475083|ref|NP_001061138.1| Os08g0180300 [Oryza sativa Japonica Group] gi|46805057|dbj|BAD17038.1| putative SNF2 domain-containing protein [Oryza sativa Japonica Group] gi|113623107|dbj|BAF23052.1| Os08g0180300 [Oryza sativa Japonica Group] gi|215712333|dbj|BAG94460.1| unnamed protein product [Oryza sativa Japonica Group] gi|222640021|gb|EEE68153.1| hypothetical protein OsJ_26263 [Oryza sativa Japonica Group] Length = 1030 Score = 95.4 bits (236), Expect = 4e-18, Method: Composition-based stats. Identities = 24/132 (18%), Positives = 51/132 (38%), Gaps = 17/132 (12%) Query: 70 PIIVAYHFNSDLAR---------LQKAFPQGR-TLDKDPCTIQEWN-EGKIPLLFAHPAS 118 IV + L +Q G +L+ ++++N + ++ ++ + Sbjct: 877 KAIVFSQWTGMLDLLELSLNSNLIQYRRLDGTMSLNSRDKAVKDFNTDPEVRVMIMSLKA 936 Query: 119 CGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDE 178 GLN+ ++ LWW+ Q I+R + G R V V L ++T+++ Sbjct: 937 GNLGLNM-VAACHVILLDLWWNPYAEDQAIDR-----AHRIGQTRPVTVSRLTIKDTVED 990 Query: 179 LVLQRLRTKSTI 190 +L K + Sbjct: 991 RILALQEEKRAM 1002 >gi|297834836|ref|XP_002885300.1| hypothetical protein ARALYDRAFT_479436 [Arabidopsis lyrata subsp. lyrata] gi|297331140|gb|EFH61559.1| hypothetical protein ARALYDRAFT_479436 [Arabidopsis lyrata subsp. lyrata] Length = 910 Score = 95.4 bits (236), Expect = 4e-18, Method: Composition-based stats. Identities = 35/165 (21%), Positives = 62/165 (37%), Gaps = 22/165 (13%) Query: 45 EKHWKEVHDEKIKALEVIIEKANAA---PIIVAYHFNSDLARLQK----------AFPQG 91 + W E+ K+ L ++ I++ ++ L + Sbjct: 526 DGAWVEL-SGKMHVLSRLLANLRRKTNDRIVLVSNYTQTLDLFAQLCRERRYPFLRLDGS 584 Query: 92 RTLDKDPCTIQEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIE 149 T+ K + N+ + G GLNL G N LV F W+ +Q Sbjct: 585 TTISKRQKLVNRLNDPTKDEFAFLLSSKAGGCGLNL-IGANRLVLFDPDWNPANDKQAAA 643 Query: 150 RIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 R+ + G K+ V+VY ++ TI+E V QR +K +Q ++ Sbjct: 644 RVW-----RDGQKKRVYVYRFLSTGTIEEKVYQRQMSKEGLQKVI 683 >gi|190405721|gb|EDV08988.1| chromo domain protein 1 [Saccharomyces cerevisiae RM11-1a] Length = 1436 Score = 95.4 bits (236), Expect = 4e-18, Method: Composition-based stats. Identities = 28/159 (17%), Positives = 62/159 (38%), Gaps = 20/159 (12%) Query: 52 HDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARL----------QKAFPQGRTLDKDPC 99 K+ L+ ++ + + +++ L L + + Sbjct: 661 SSGKMVLLDQLLTRLKKDGHRVLIFSQMVRMLDILGDYLSIKGINFQRLDGTVPSAQRRI 720 Query: 100 TIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 +I +N + + G G+NL + +V F W+ + Q + R Sbjct: 721 SIDHFNSPDSNDFVFLLSTRAGGLGINLMT-ADTVVIFDSDWNPQADLQAMAR-----AH 774 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + G K V VY L++++T++E VL+R R K ++ +++ Sbjct: 775 RIGQKNHVMVYRLVSKDTVEEEVLERARKKMILEYAIIS 813 >gi|145338703|ref|NP_188552.3| ATRAD54 (ARABIDOPSIS HOMOLOG OF RAD54); ATP binding / DNA binding / helicase/ nucleic acid binding [Arabidopsis thaliana] gi|112419506|dbj|BAF03042.1| Rad54 [Arabidopsis thaliana] gi|116518260|gb|ABJ99465.1| RAD54-like protein [Arabidopsis thaliana] Length = 910 Score = 95.4 bits (236), Expect = 4e-18, Method: Composition-based stats. Identities = 35/165 (21%), Positives = 62/165 (37%), Gaps = 22/165 (13%) Query: 45 EKHWKEVHDEKIKALEVIIEKANAA---PIIVAYHFNSDLARLQK----------AFPQG 91 + W E+ K+ L ++ I++ ++ L + Sbjct: 526 DGAWVEL-SGKMHVLSRLLANLRRKTDDRIVLVSNYTQTLDLFAQLCRERRYPFLRLDGS 584 Query: 92 RTLDKDPCTIQEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIE 149 T+ K + N+ + G GLNL G N LV F W+ +Q Sbjct: 585 TTISKRQKLVNRLNDPTKDEFAFLLSSKAGGCGLNL-IGANRLVLFDPDWNPANDKQAAA 643 Query: 150 RIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 R+ + G K+ V+VY ++ TI+E V QR +K +Q ++ Sbjct: 644 RVW-----RDGQKKRVYVYRFLSTGTIEEKVYQRQMSKEGLQKVI 683 >gi|9294624|dbj|BAB02963.1| DNA repair protein RAD54-like [Arabidopsis thaliana] Length = 959 Score = 95.4 bits (236), Expect = 4e-18, Method: Composition-based stats. Identities = 35/165 (21%), Positives = 62/165 (37%), Gaps = 22/165 (13%) Query: 45 EKHWKEVHDEKIKALEVIIEKANAA---PIIVAYHFNSDLARLQK----------AFPQG 91 + W E+ K+ L ++ I++ ++ L + Sbjct: 526 DGAWVEL-SGKMHVLSRLLANLRRKTDDRIVLVSNYTQTLDLFAQLCRERRYPFLRLDGS 584 Query: 92 RTLDKDPCTIQEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIE 149 T+ K + N+ + G GLNL G N LV F W+ +Q Sbjct: 585 TTISKRQKLVNRLNDPTKDEFAFLLSSKAGGCGLNL-IGANRLVLFDPDWNPANDKQAAA 643 Query: 150 RIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 R+ + G K+ V+VY ++ TI+E V QR +K +Q ++ Sbjct: 644 RVW-----RDGQKKRVYVYRFLSTGTIEEKVYQRQMSKEGLQKVI 683 >gi|146412556|ref|XP_001482249.1| hypothetical protein PGUG_05269 [Meyerozyma guilliermondii ATCC 6260] Length = 593 Score = 95.4 bits (236), Expect = 4e-18, Method: Composition-based stats. Identities = 44/227 (19%), Positives = 84/227 (37%), Gaps = 35/227 (15%) Query: 2 KQYHKFQRELYC-----DLQGENIEAFNSASKTVKCLQLANG-AVYYDEEKHWKEVHDE- 54 K Y + + D G+ I N+ ++ ++ ++ N VY + E D Sbjct: 244 KLYQQMLKYNLLFSSNPDGDGKPIAIKNTNNQIMQLRKICNHPFVYEEVENMINPTADTN 303 Query: 55 --------KIKALEVIIEK--ANAAPIIVAYH------FNSDLARLQK----AFPQGRTL 94 K + L+ I+ K A +++ + D RL+ Sbjct: 304 DEIWRVAGKFELLDRILPKLKATGHRVLIFFQMTLIMNIMEDFLRLRDLKYMRLDGATKA 363 Query: 95 DKDPCTIQEWNE--GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIG 152 D ++ +NE + G GLNLQ + ++ F W+ + Q Sbjct: 364 DDRTGLLKLFNEENSDYFCFLLSTRAGGLGLNLQT-ADTVIIFDSDWNPHQDLQA----- 417 Query: 153 VTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 R + G K V + LI +++++E++L+R K I ++ A K Sbjct: 418 QDRAHRIGQKNEVRIIRLITEDSVEEMILERAHAKLEIDGKVIQAGK 464 >gi|119470473|ref|XP_001258040.1| SNF2 family helicase/ATPase, putative [Neosartorya fischeri NRRL 181] gi|119406192|gb|EAW16143.1| SNF2 family helicase/ATPase, putative [Neosartorya fischeri NRRL 181] Length = 1148 Score = 95.4 bits (236), Expect = 4e-18, Method: Composition-based stats. Identities = 31/172 (18%), Positives = 65/172 (37%), Gaps = 21/172 (12%) Query: 40 VYYDEEKH-WKEVHDEKIKALEVIIE-KANAAPIIVAYHFNSDLARLQKAFPQGRT---- 93 +Y + + + + KI+ L I+ +A IV F S L +++ + Sbjct: 896 IYLNPGDNETQVLPSTKIRHLMKILRREAGDYKFIVFSVFTSMLDKIEPFLKRAGIGFAR 955 Query: 94 --------LDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQ 145 L + N +L + GLNL + +V +W+ + Sbjct: 956 YDGSMRNDLREASLDRLRHNSA-TRVLLCSLRAGALGLNLT-AASRVVILEPFWNPFVEE 1013 Query: 146 QMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 Q I+R+ + V +Y +I ++T++E +L+ K + +L + Sbjct: 1014 QAIDRV-----HRLNQTVDVKIYKMIIKDTVEERILELQDRKRELANLTIEG 1060 >gi|70986552|ref|XP_748767.1| SWI/SNF family DNA-dependent ATPase [Aspergillus fumigatus Af293] gi|66846397|gb|EAL86729.1| SWI/SNF family DNA-dependent ATPase, putative [Aspergillus fumigatus Af293] Length = 707 Score = 95.4 bits (236), Expect = 4e-18, Method: Composition-based stats. Identities = 32/155 (20%), Positives = 60/155 (38%), Gaps = 21/155 (13%) Query: 51 VHDEKIKALEVII----EKANAAPIIVAYHFNSDLARLQ----------KAFPQGRTLDK 96 V+ KI+ II ++ +IV HF + L ++ + + T + Sbjct: 530 VNSSKIEKAAEIIKAIRDQGTGDKVIVFSHFTALLDLIEVPIARSGWKYRRYDGRMTPAE 589 Query: 97 DPCTIQEWNE-GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTR 155 I + +L + GLNL N+++ W+ +Q I R+ Sbjct: 590 RGSAISSFASQPDCLVLLVSLKAGNAGLNLTCASNVIIM-EPSWNPYIEEQAIGRV---- 644 Query: 156 QRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 + G +R V VY L+ +TI+ +L+ K + Sbjct: 645 -HRIGQERHVRVYRLLVADTIEIRILELQEKKRKL 678 >gi|255552483|ref|XP_002517285.1| helicase, putative [Ricinus communis] gi|223543548|gb|EEF45078.1| helicase, putative [Ricinus communis] Length = 363 Score = 95.4 bits (236), Expect = 4e-18, Method: Composition-based stats. Identities = 33/166 (19%), Positives = 59/166 (35%), Gaps = 29/166 (17%) Query: 48 WKEVHDEKIKALEVIIEKANAA----PIIVAYHFNSDLARLQKAFPQGRTL--------- 94 K K+ AL ++ A ++ F L L++ Sbjct: 184 SKRNTSSKVSALLNLLMAARDKNPTAKSVIFSQFQKMLVLLEEPLKAAGFKILRLDGTMN 243 Query: 95 -DKDPCTIQEWNEGKIP------LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQM 147 K I+E+ IP +L A + G+NL + + WW+ +Q Sbjct: 244 AKKKAQVIKEF---GIPGPNGPTVLLASLKASCAGINL-AAASKVYLLEPWWNPAVEEQA 299 Query: 148 IERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDL 193 ++R+ + G K V V LI +N+I+E +L+ K + Sbjct: 300 MDRV-----HRIGQKEDVTVVRLITRNSIEERILEMQERKKKLAKE 340 >gi|190407873|gb|EDV11138.1| helicase [Saccharomyces cerevisiae RM11-1a] Length = 1867 Score = 95.4 bits (236), Expect = 4e-18, Method: Composition-based stats. Identities = 28/122 (22%), Positives = 52/122 (42%), Gaps = 8/122 (6%) Query: 77 FNSDLARLQKAFPQGRTLDKDPC-TIQEWNE-GKIPLLFAHPASCGHGLNLQYGGNILVF 134 F + + G +D ++++NE I L G GLNL G + ++F Sbjct: 1667 FKKYMPSVTYMRLDGSIDPRDRQKVVRKFNEDPSIDCLLLTTKVGGLGLNLT-GADTVIF 1725 Query: 135 FSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 W+ Q ++R + G K+ V VY +I + T++E ++ + K I + Sbjct: 1726 VEHDWNPMNDLQAMDR-----AHRIGQKKVVNVYRIITKGTLEEKIMGLQKFKMNIASTV 1780 Query: 195 LN 196 +N Sbjct: 1781 VN 1782 >gi|188996818|ref|YP_001931069.1| Non-specific serine/threonine protein kinase [Sulfurihydrogenibium sp. YO3AOP1] gi|188931885|gb|ACD66515.1| Non-specific serine/threonine protein kinase [Sulfurihydrogenibium sp. YO3AOP1] Length = 559 Score = 95.4 bits (236), Expect = 4e-18, Method: Composition-based stats. Identities = 33/190 (17%), Positives = 80/190 (42%), Gaps = 30/190 (15%) Query: 29 TVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKA--NAAPIIVAYHFNSD-LARLQ 85 K Q+ N + +H K++ L+ I+++ +++ +F ++ + ++ Sbjct: 365 LQKLRQICNFP--------PESIHSPKVERLKEIVKELADQKEKVVIFTNFVNEGVDKII 416 Query: 86 KAFPQ-------------GRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNIL 132 K + +K+ + + K + + G GL L + + Sbjct: 417 KNIKTILQPQQIVSYHGSLKPDEKNLAVKKFVEDEKCLVFVGTINAAGEGLTLT-SSSYV 475 Query: 133 VFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQD 192 +FF L W+ + Q +R+ + G K V +Y I QNT++E ++Q+L K ++ + Sbjct: 476 IFFDLHWNPAKMWQAEDRV-----HRIGQKNKVNIYTFITQNTVEEKIMQKLEEKRSMIN 530 Query: 193 LLLNALKKET 202 +++ + + Sbjct: 531 NVIDDVSSDI 540 >gi|149244356|ref|XP_001526721.1| chromo domain protein 1 [Lodderomyces elongisporus NRRL YB-4239] gi|146449115|gb|EDK43371.1| chromo domain protein 1 [Lodderomyces elongisporus NRRL YB-4239] Length = 1500 Score = 95.4 bits (236), Expect = 4e-18, Method: Composition-based stats. Identities = 27/161 (16%), Positives = 61/161 (37%), Gaps = 20/161 (12%) Query: 50 EVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARL----------QKAFPQGRTLDKD 97 + K+ LE ++ + +++ L L + G + Sbjct: 724 VMSSGKMVLLEQLLTRLKKEGHRVLIFSQMVRMLDILGDYMSIKGYAFQRLDGGIPSSQR 783 Query: 98 PCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTR 155 +I +N + G G+NL + ++ F W+ + Q + R Sbjct: 784 RISIDHFNAPDSKDFAFLLSTRAGGLGINLMT-ADTVIIFDSDWNPQADLQAMAR----- 837 Query: 156 QRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + G K V VY ++++T++E +L+R R K ++ +++ Sbjct: 838 AHRIGQKNQVLVYRFVSKDTVEEQILERARKKMILEYAIIS 878 >gi|124481796|gb|AAI33116.1| LOC553504 protein [Danio rerio] Length = 1105 Score = 95.4 bits (236), Expect = 4e-18, Method: Composition-based stats. Identities = 37/169 (21%), Positives = 66/169 (39%), Gaps = 25/169 (14%) Query: 30 VKCLQ-LANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAF 88 +K +Q L N + ++ + + + LE L+ Sbjct: 442 MKVMQKLLNHFIAKKDKVLLFSLSTKLLDVLESYC----------------MAEGLEYHR 485 Query: 89 PQGRTLDKDP-CTIQEWNE-GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 G T KD ++E+N + L + G GLN G N++V F W+ Q Sbjct: 486 LDGNTKSKDRVKIVKEFNSSRDVNLCLVSTLAGGLGLNF-IGANVVVLFDPTWNPANDLQ 544 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 I+R+ + G R V V+ LI+ T++E++ R K +Q ++ Sbjct: 545 AIDRV-----YRIGQCRDVTVFRLISLGTVEEIIYLRQVYKQQLQSSVI 588 >gi|115433988|ref|NP_001041752.1| Os01g0102800 [Oryza sativa Japonica Group] gi|15128457|dbj|BAB62641.1| putative DNA repair and recombination protein [Oryza sativa Japonica Group] gi|20804446|dbj|BAB92143.1| putative DNA repair and recombination protein [Oryza sativa Japonica Group] gi|39652280|dbj|BAD04853.1| Cockayne syndrome group B [Oryza sativa Japonica Group] gi|113531283|dbj|BAF03666.1| Os01g0102800 [Oryza sativa Japonica Group] Length = 1187 Score = 95.4 bits (236), Expect = 4e-18, Method: Composition-based stats. Identities = 33/156 (21%), Positives = 58/156 (37%), Gaps = 19/156 (12%) Query: 53 DEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQ----------KAFPQGRTLDKDPCT 100 K+K +E +++ K +++ L ++ + + Sbjct: 712 SGKMKVVEQVLKVWKEQGHRVLLFTQTQQMLDIMENFLTACEYQYRRMDGLTPAKQRMAL 771 Query: 101 IQEWNE-GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQA 159 I E+N +I + G G NL G N ++ + W+ Q ER + Sbjct: 772 IDEFNNTDEIFIFILTTKVGGLGTNLT-GANRIIIYDPDWNPSTDMQARERAW-----RI 825 Query: 160 GFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 G R V VY LI + TI+E V R K + + +L Sbjct: 826 GQTRDVTVYRLITRGTIEEKVYHRQIYKHFLTNKVL 861 >gi|6325175|ref|NP_015243.1| Mot1p [Saccharomyces cerevisiae S288c] gi|417308|sp|P32333|MOT1_YEAST RecName: Full=TATA-binding protein-associated factor MOT1; Short=TBP-associated factor MOT1; AltName: Full=Modifier of transcription 1 gi|171965|gb|AAA34786.1| Mot1 [Saccharomyces cerevisiae] gi|1147612|gb|AAB68257.1| Mot1p: a putative helicase [Saccharomyces cerevisiae] gi|151942715|gb|EDN61061.1| modifier of transcription [Saccharomyces cerevisiae YJM789] gi|285815459|tpg|DAA11351.1| TPA: Mot1p [Saccharomyces cerevisiae S288c] Length = 1867 Score = 95.4 bits (236), Expect = 4e-18, Method: Composition-based stats. Identities = 28/122 (22%), Positives = 52/122 (42%), Gaps = 8/122 (6%) Query: 77 FNSDLARLQKAFPQGRTLDKDPC-TIQEWNE-GKIPLLFAHPASCGHGLNLQYGGNILVF 134 F + + G +D ++++NE I L G GLNL G + ++F Sbjct: 1667 FKKYMPSVTYMRLDGSIDPRDRQKVVRKFNEDPSIDCLLLTTKVGGLGLNLT-GADTVIF 1725 Query: 135 FSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 W+ Q ++R + G K+ V VY +I + T++E ++ + K I + Sbjct: 1726 VEHDWNPMNDLQAMDR-----AHRIGQKKVVNVYRIITKGTLEEKIMGLQKFKMNIASTV 1780 Query: 195 LN 196 +N Sbjct: 1781 VN 1782 >gi|63054463|ref|NP_588472.2| ATP-dependent DNA helicase Snf22 [Schizosaccharomyces pombe 972h-] gi|46397098|sp|O94421|SNF22_SCHPO RecName: Full=SWI/SNF chromatin-remodeling complex subunit snf22; AltName: Full=ATP-dependent helicase snf22; AltName: Full=SWI/SNF complex subunit snf22 gi|42558222|dbj|BAD11104.1| SNF2-family ATP dependent chromatin remodeling factor Snf22 [Schizosaccharomyces pombe] gi|157310533|emb|CAA22498.2| ATP-dependent DNA helicase Snf22 [Schizosaccharomyces pombe] Length = 1680 Score = 95.4 bits (236), Expect = 4e-18, Method: Composition-based stats. Identities = 34/226 (15%), Positives = 79/226 (34%), Gaps = 34/226 (15%) Query: 1 MKQYHKFQRELYCDLQGENIEAFNSASKTVKCLQL---ANGAVYYDEEKHWKEVHDEKIK 57 +K Y + ++ + GE +QL N +++ + + + Sbjct: 1122 LKLYQQMKKHGMLFVDGEK-GKTGIKGLQNTVMQLKKICNHPFIFEDVERAIDPSGTNVD 1180 Query: 58 ALE------VIIEK------ANAAPIIVAYHFNSDLARL---------QKAFPQGRTLDK 96 L ++++ ++ + + + + G T Sbjct: 1181 LLWRAAGKFELLDRILPKLFLTGHKTLMFFQMTQIMTIMEDYLRSKNWKYLRLDGSTKSD 1240 Query: 97 DP-CTIQEWNEGK--IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGV 153 D + ++N+ K + + + G GLNLQ + ++ F W+ + Q Sbjct: 1241 DRCSLLAQFNDPKSDVYIFMLSTRAGGLGLNLQT-ADTVIIFDTDWNPHQDLQA-----Q 1294 Query: 154 TRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 R + G + V + LI + +I+E +L R + K + ++ A K Sbjct: 1295 DRAHRIGQTKEVRILRLITEKSIEENILSRAQYKLDLDGKVIQAGK 1340 >gi|289615950|emb|CBI57301.1| putative STH1 protein [Sordaria macrospora] Length = 1486 Score = 95.4 bits (236), Expect = 4e-18, Method: Composition-based stats. Identities = 38/225 (16%), Positives = 86/225 (38%), Gaps = 33/225 (14%) Query: 2 KQYHKF---QRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKA 58 + Y + Q+ L D +G A ++ ++ +L N +DE ++ + Sbjct: 794 RLYKQMVTHQKILVSDGKGGKTGARGLSNMIMQLRKLCNHPFVFDEVENQMNPTNTSNDL 853 Query: 59 LE------VIIEK------ANAAPIIVAYHFNSDLAR---------LQKAFPQGRTLDKD 97 L ++++ A +++ + + + +Q G T +D Sbjct: 854 LWRTAGKFELLDRVLPKYKATGHRVLMFFQMTAIMDIMEDFLRFRGIQYLRLDGTTKSED 913 Query: 98 -PCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 ++ +N P + + G GLNLQ + ++ + W+ + Q Sbjct: 914 RSELLRLFNAPDSPYFMFLLSTRAGGLGLNLQT-ADTVIIYDSDWNPHQDLQA-----QD 967 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 R + G K V + LI+ +++E +L+R R K + ++ A + Sbjct: 968 RAHRIGQKNEVRILRLISSASVEEKILERARFKLDMDGKVIQAGR 1012 >gi|256269976|gb|EEU05227.1| Mot1p [Saccharomyces cerevisiae JAY291] Length = 1867 Score = 95.4 bits (236), Expect = 4e-18, Method: Composition-based stats. Identities = 28/122 (22%), Positives = 52/122 (42%), Gaps = 8/122 (6%) Query: 77 FNSDLARLQKAFPQGRTLDKDPC-TIQEWNE-GKIPLLFAHPASCGHGLNLQYGGNILVF 134 F + + G +D ++++NE I L G GLNL G + ++F Sbjct: 1667 FKKYMPSVTYMRLDGSIDPRDRQKVVRKFNEDPSIDCLLLTTKVGGLGLNLT-GADTVIF 1725 Query: 135 FSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 W+ Q ++R + G K+ V VY +I + T++E ++ + K I + Sbjct: 1726 VEHDWNPMNDLQAMDR-----AHRIGQKKVVNVYRIITKGTLEEKIMGLQKFKMNIASTV 1780 Query: 195 LN 196 +N Sbjct: 1781 VN 1782 >gi|255944965|ref|XP_002563250.1| Pc20g07250 [Penicillium chrysogenum Wisconsin 54-1255] gi|211587985|emb|CAP86054.1| Pc20g07250 [Penicillium chrysogenum Wisconsin 54-1255] Length = 1119 Score = 95.4 bits (236), Expect = 4e-18, Method: Composition-based stats. Identities = 38/162 (23%), Positives = 71/162 (43%), Gaps = 19/162 (11%) Query: 46 KHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFN-------SDLARLQKAF--PQGRTL 94 K+ + + K++ L+ ++ + AN ++ F L L+ F GRT Sbjct: 932 KNDEWMDSGKVEQLKELLTRFIANGDRTLIFSQFTMVMDILEHVLETLKIEFVRLDGRTN 991 Query: 95 DKDPCTI-QEWNEG-KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIG 152 +D +I ++E +IP+ + G G+NL N +V F ++ +E Q Sbjct: 992 VEDRQSILDAFHERTEIPVFLLSTKAGGAGINL-ACANRVVIFDSSFNPQEDVQA----- 1045 Query: 153 VTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 R + G R V VY L+ ++TI+E + +TK + + Sbjct: 1046 ENRAHRVGQTREVEVYRLVTRHTIEEQIYGLGQTKLALDQAV 1087 >gi|87307136|ref|ZP_01089281.1| swi/snf family protein [Blastopirellula marina DSM 3645] gi|87289876|gb|EAQ81765.1| swi/snf family protein [Blastopirellula marina DSM 3645] Length = 589 Score = 95.4 bits (236), Expect = 4e-18, Method: Composition-based stats. Identities = 39/205 (19%), Positives = 75/205 (36%), Gaps = 27/205 (13%) Query: 4 YHKFQRELYCDLQ--GENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEV 61 Y + E L+ GE + + ++ Q+ N + K+ L Sbjct: 366 YELAENEGIVRLEKMGEELTVQHVFELVLRLKQICNF--------DPRTGDSTKMDQLRA 417 Query: 62 IIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTL--------DKDPCTIQEWN-EGKIP 110 +E+ A+ IV + + ++++ L K I+++ + Sbjct: 418 DMEEVVASGKKAIVFSQWTQTIEQIRRQLEPFGPLEYHGKIPSKKRDGVIEQFKHDPSKS 477 Query: 111 LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYL 170 ++ + GLNLQ+ + F WW+ Q I R + G K AV + Sbjct: 478 VILMSYGAGSVGLNLQF-CEYVFLFDRWWNPAIEDQAINR-----AHRIGAKGAVTISRY 531 Query: 171 IAQNTIDELVLQRLRTKSTIQDLLL 195 +A NTI++ + Q L K + + L Sbjct: 532 LAMNTIEDRIDQVLSEKRELFNTLF 556 >gi|302682057|ref|XP_003030710.1| hypothetical protein SCHCODRAFT_57400 [Schizophyllum commune H4-8] gi|300104401|gb|EFI95807.1| hypothetical protein SCHCODRAFT_57400 [Schizophyllum commune H4-8] Length = 700 Score = 95.4 bits (236), Expect = 4e-18, Method: Composition-based stats. Identities = 31/160 (19%), Positives = 69/160 (43%), Gaps = 19/160 (11%) Query: 50 EVHDEKIKALEVII--EKANAAPIIVAYHFNSDLARLQ---------KAFPQGRTLDKDP 98 + K++ L ++ +KA +++ L L+ G T +D Sbjct: 450 QFDCGKLQYLADLLREKKAGGHRVLIFTQMTRILDILEVFLNFHGYLYLRLDGATKIEDR 509 Query: 99 CTI-QEWNEGK-IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 + + +N + A S G G+NL G + +VF+ ++ + ++R R Sbjct: 510 QYVTERFNADDRVFCFIASSRSGGVGINLT-GADTVVFYDSDFNPQ-----MDRQCEDRA 563 Query: 157 RQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + G R V +Y ++Q+T++E +L++ K ++ L++ Sbjct: 564 HRIGQIRDVHIYRFVSQHTVEEAMLRKANQKRSLDSLVIQ 603 >gi|198416532|ref|XP_002119473.1| PREDICTED: similar to TATA-binding protein-associated factor 172 (ATP-dependent helicase BTAF1) (TBP-associated factor 172) (TAF-172) (TAF(II)170) (B-TFIID transcription factor-associated 170 kDa subunit), partial [Ciona intestinalis] Length = 1335 Score = 95.4 bits (236), Expect = 4e-18, Method: Composition-based stats. Identities = 29/144 (20%), Positives = 55/144 (38%), Gaps = 20/144 (13%) Query: 66 ANAAPIIVAYHFNSDLARLQK-------------AFPQGRTLDKDPCTIQEWNE-GKIPL 111 AN +V + L ++ G ++ + ++N I L Sbjct: 1125 ANQHRALVFCQHRNLLNIIENDLLRQLMPGVTYLRLDGGVPSNQRYSIVSKFNNDPSIDL 1184 Query: 112 LFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLI 171 L G GLNL G + ++F W+ Q ++R + G K+ V VY +I Sbjct: 1185 LLLTTKVGGLGLNLT-GADTVIFVEHDWNPMVDLQAMDR-----AHRIGQKKVVNVYRII 1238 Query: 172 AQNTIDELVLQRLRTKSTIQDLLL 195 + T++E +L K + + ++ Sbjct: 1239 TRGTMEEKILGLQEFKLNVANTIV 1262 >gi|124360542|gb|ABN08552.1| SNF2-related; Zinc finger, RING-type; ATP-requiring DNA helicase RecQ [Medicago truncatula] Length = 844 Score = 95.4 bits (236), Expect = 4e-18, Method: Composition-based stats. Identities = 27/161 (16%), Positives = 58/161 (36%), Gaps = 23/161 (14%) Query: 47 HWKEVHDEKIKALEVIIEKANAA----PIIVAYHFNSDLARLQKAFPQGRTL-------- 94 + K+ L ++ ++ +V F L L++ Sbjct: 663 TAEVRSSTKVSTLIKLLTESRDQNPATKSVVFSQFRKMLLLLEEPLKAAGFKTLRLDGTM 722 Query: 95 --DKDPCTIQEWNEGKIP---LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIE 149 + I+++ ++ +L A + G+NL + + WW+ +Q ++ Sbjct: 723 NAKQRAQVIEQFQLSEVDEPMILLASLRASSTGINLT-AASRVYLMEPWWNPAVEEQAMD 781 Query: 150 RIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 R+ + G K V + LIA+N+I+E +L K Sbjct: 782 RV-----HRIGQKEEVKIVRLIAKNSIEEKILMLQEKKKKT 817 >gi|255720811|ref|XP_002545340.1| hypothetical protein CTRG_00121 [Candida tropicalis MYA-3404] gi|240135829|gb|EER35382.1| hypothetical protein CTRG_00121 [Candida tropicalis MYA-3404] Length = 1162 Score = 95.4 bits (236), Expect = 4e-18, Method: Composition-based stats. Identities = 32/179 (17%), Positives = 69/179 (38%), Gaps = 16/179 (8%) Query: 35 LANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQ-----KAFP 89 L + V D + I+ ++ I + + IIV F + L+ + P Sbjct: 964 LISEFVKRDNGFEPSAKIQKCIEIIQEITQANSNEKIIVFSQFTTLFDLLKLVLHYQKIP 1023 Query: 90 QGR-----TLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEH 144 R ++ I+E+ + +L S GL L +I++ +W+ Sbjct: 1024 FLRYDGTMNMESKNTVIKEFYKSDTRVLLLSLRSGNAGLTLTCANHIIIM-DPFWNPYVE 1082 Query: 145 QQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETI 203 Q + R + G +R V V+ ++ + T++ +++ K + L+ K ++I Sbjct: 1083 DQAMGR-----AHRIGQEREVHVHRVLIEGTVESRIMELQEHKKELIGEALDESKMKSI 1136 >gi|168057891|ref|XP_001780945.1| SNF2 family chromodomain-helicase [Physcomitrella patens subsp. patens] gi|162667579|gb|EDQ54205.1| SNF2 family chromodomain-helicase [Physcomitrella patens subsp. patens] Length = 1677 Score = 95.4 bits (236), Expect = 4e-18, Method: Composition-based stats. Identities = 22/140 (15%), Positives = 49/140 (35%), Gaps = 18/140 (12%) Query: 68 AAPIIVAYHFNSDLARLQKAFP---------QGRTLDKDPCT-IQEWNEGK--IPLLFAH 115 +++ F L L+ G+ D I ++ I + Sbjct: 880 GRRVLIFSQFTMMLDLLEDYLLSKGYSYERIDGKIRGSDRQAAIDRYSAKDSSIFVFLLS 939 Query: 116 PASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNT 175 + G G+ L + + + W+ + Q + R + G + V +Y LI +NT Sbjct: 940 TRAGGLGITLT-AADTCIIYDSDWNPQNDLQAMARC-----HRIGQTKDVKIYRLITRNT 993 Query: 176 IDELVLQRLRTKSTIQDLLL 195 ++ + + K + + +L Sbjct: 994 YEQRLFECSSRKYGLDEAIL 1013 >gi|259150076|emb|CAY86879.1| Mot1p [Saccharomyces cerevisiae EC1118] Length = 1842 Score = 95.4 bits (236), Expect = 4e-18, Method: Composition-based stats. Identities = 28/122 (22%), Positives = 52/122 (42%), Gaps = 8/122 (6%) Query: 77 FNSDLARLQKAFPQGRTLDKDPC-TIQEWNE-GKIPLLFAHPASCGHGLNLQYGGNILVF 134 F + + G +D ++++NE I L G GLNL G + ++F Sbjct: 1642 FKKYMPSVTYMRLDGSIDPRDRQKVVRKFNEDPSIDCLLLTTKVGGLGLNLT-GADTVIF 1700 Query: 135 FSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 W+ Q ++R + G K+ V VY +I + T++E ++ + K I + Sbjct: 1701 VEHDWNPMNDLQAMDR-----AHRIGQKKVVNVYRIITKGTLEEKIMGLQKFKMNIASTV 1755 Query: 195 LN 196 +N Sbjct: 1756 VN 1757 >gi|146420558|ref|XP_001486234.1| hypothetical protein PGUG_01905 [Meyerozyma guilliermondii ATCC 6260] Length = 761 Score = 95.4 bits (236), Expect = 4e-18, Method: Composition-based stats. Identities = 33/162 (20%), Positives = 69/162 (42%), Gaps = 18/162 (11%) Query: 47 HWKEVHDEKIKALEVII-EKANAAPIIVAYHFNSDLARLQK---------AFPQGRTLDK 96 + KI+ L+ +I E +++ F L L G T + Sbjct: 502 EVFYKNSAKIQVLDQLINELLPDHKLLIFSQFTKMLDLLHDWLDFKNIGFCRLDGSTSHE 561 Query: 97 DPCT-IQEWNEGK-IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 D T I ++N K + + G G+NL + +V F W+ + Q I+R+ Sbjct: 562 DRDTQIDQFNTDKSKKVFLLSTRAGGLGINLT-AADTVVIFDNDWNPQVDLQAIDRV--- 617 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + G K+ V +Y + +N+++E+++ + +K ++ L++ Sbjct: 618 --HRIGQKKPVKIYRFLIKNSVEEILISKSYSKRFLEKLVIQ 657 >gi|150951142|ref|XP_001387415.2| ATPase component of a four subunit chromatin remodeling complex [Scheffersomyces stipitis CBS 6054] gi|149388353|gb|EAZ63392.2| ATPase component of a four subunit chromatin remodeling complex [Pichia stipitis CBS 6054] Length = 860 Score = 95.4 bits (236), Expect = 4e-18, Method: Composition-based stats. Identities = 43/225 (19%), Positives = 89/225 (39%), Gaps = 42/225 (18%) Query: 6 KFQRELYCDLQGENIEAFNSASK----------TVKCLQLAN----------GAVYYDEE 45 + QR+ Y + ++I+A N A+K ++ + N G Y +E Sbjct: 214 EMQRKWYQKILEKDIDAVNGANKKESKTRLLNIVMQLRKCCNHPYLFEGAEPGPPYTTDE 273 Query: 46 KHWKEVHDEKIKALEVIIE--KANAAPIIVAYHFNSDLARL---------QKAFPQGRTL 94 + +K+ L+ ++ + + +++ + L L + G+T Sbjct: 274 HLV--YNSQKMIILDQLLRKFQKEGSRVLIFSQMSRMLDILEDYCFFREFKYCRIDGQTE 331 Query: 95 DKDP-CTIQEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERI 151 D I E+N+ + + G G+NL +I+V F W+ + Q ++R Sbjct: 332 HADRINAIDEYNKPGSDRFVFLLTTRAGGLGINLT-SADIVVLFDSDWNPQADLQAMDR- 389 Query: 152 GVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + G + V V+ + +N I+E VL+R K + L++ Sbjct: 390 ----AHRIGQTKQVKVFRFVTENAIEEKVLERATQKLRLDQLVIQ 430 >gi|61402625|gb|AAH91795.1| LOC553504 protein [Danio rerio] Length = 1069 Score = 95.4 bits (236), Expect = 4e-18, Method: Composition-based stats. Identities = 37/169 (21%), Positives = 66/169 (39%), Gaps = 25/169 (14%) Query: 30 VKCLQ-LANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAF 88 +K +Q L N + ++ + + + LE L+ Sbjct: 442 MKVMQKLLNHFIAKKDKVLLFSLSTKLLDVLESFC----------------MAEGLEYHR 485 Query: 89 PQGRTLDKDP-CTIQEWNE-GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 G T KD ++E+N + L + G GLN G N++V F W+ Q Sbjct: 486 LDGNTKSKDRVKIVKEFNSSRDVNLCLVSTLAGGLGLNF-IGANVVVLFDPTWNPANDLQ 544 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 I+R+ + G R V V+ LI+ T++E++ R K +Q ++ Sbjct: 545 AIDRV-----YRIGQCRDVTVFRLISLGTVEEIIYLRQVYKQQLQSSVI 588 >gi|71033631|ref|XP_766457.1| DNA-dependent ATPase [Theileria parva strain Muguga] gi|68353414|gb|EAN34174.1| DNA-dependent ATPase, putative [Theileria parva] Length = 1253 Score = 95.4 bits (236), Expect = 4e-18, Method: Composition-based stats. Identities = 40/221 (18%), Positives = 84/221 (38%), Gaps = 32/221 (14%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKC-LQL--ANGAVY---------YDEEKHWK 49 + Y R+ +L ++ + + +QL A Y D Sbjct: 452 QLYRDLLRKNVPELGTDDSTKSGIHVQLLNLAMQLRKACNHPYLFEGYEDRNEDPFGEHV 511 Query: 50 EVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQ---------KAFPQGRTLDKDP 98 + K+ ++ +I + N++ I++ L L+ G T +D Sbjct: 512 VQNSGKLCLVDKLIPRLLGNSSRILIFSQMARMLDILEDYCRMRNYLYFRIDGNTSGEDR 571 Query: 99 C-TIQEWN--EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTR 155 I +N E K+ + + G G+NL ++++ + W+ + Q I+R Sbjct: 572 DYQISSFNHPESKVNIFLLSTRAGGLGINL-ATADVVILYDSDWNPQVDLQAIDR----- 625 Query: 156 QRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + G + V+VY L+ Q TI+E +++R K + ++ Sbjct: 626 AHRIGQLKPVYVYRLVHQYTIEEKIIERATLKLQLDTAVIQ 666 >gi|330842982|ref|XP_003293445.1| hypothetical protein DICPUDRAFT_158303 [Dictyostelium purpureum] gi|325076230|gb|EGC30034.1| hypothetical protein DICPUDRAFT_158303 [Dictyostelium purpureum] Length = 1044 Score = 95.4 bits (236), Expect = 4e-18, Method: Composition-based stats. Identities = 32/159 (20%), Positives = 64/159 (40%), Gaps = 20/159 (12%) Query: 52 HDEKIKALEVIIEKA---NAAPIIVAYHFNSDLARLQK----------AFPQGRTLDKDP 98 K L+ I++K N + +++ L L+ +++ Sbjct: 867 TSAKCIKLKEILQKEIHENKSKVLIFSQMTKVLDILEDVLSIFGESFTRLDGQTPVNERQ 926 Query: 99 CTIQEW-NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 I + N IP+ + G G+NL N+++F+ L ++ + ++R R Sbjct: 927 DIIDHFTNSKDIPVFLLSTNAGGLGINLTC-ANVVIFYDLSFNPQ-----VDRQAEDRAH 980 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + G +R V VY L+ +NT+D + K + D +L Sbjct: 981 RLGQEREVIVYKLLTENTVDIDIFNSANEKKKLNDNILE 1019 >gi|317032364|ref|XP_001394676.2| SNF2 family helicase/ATPase [Aspergillus niger CBS 513.88] Length = 1137 Score = 95.4 bits (236), Expect = 4e-18, Method: Composition-based stats. Identities = 30/171 (17%), Positives = 66/171 (38%), Gaps = 19/171 (11%) Query: 40 VYYDEEKHW-KEVHDEKIKALEVIIE-KANAAPIIVAYHFNSDLARLQ----------KA 87 +Y + K + KI+ L I+ +++ IV F S L +++ Sbjct: 890 IYLNAGDDDNKILPSTKIRRLMKILRRESSDHKFIVFSVFTSMLDKIEPFLKRTGIGYAR 949 Query: 88 FPQGRTLDKDPCTIQEW-NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 + G D ++ + N +L + GLNL + +V +W+ +Q Sbjct: 950 YDGGMRNDHREASLNKLRNNSGTRVLLCSLRAGALGLNLT-AASRVVILEPFWNPFVEEQ 1008 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 I+R+ + V +Y +I + T++E ++ K + ++ + Sbjct: 1009 AIDRV-----HRLNQTVDVKIYKMIIKGTVEERIIDLQDRKRELANVTIEG 1054 >gi|254577539|ref|XP_002494756.1| ZYRO0A08932p [Zygosaccharomyces rouxii] gi|238937645|emb|CAR25823.1| ZYRO0A08932p [Zygosaccharomyces rouxii] Length = 1188 Score = 95.4 bits (236), Expect = 4e-18, Method: Composition-based stats. Identities = 47/232 (20%), Positives = 84/232 (36%), Gaps = 50/232 (21%) Query: 1 MKQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANG----AVYYDEEKHWKEVH---- 52 +K+Y +FQ++ +L K C + N + + + + V Sbjct: 962 LKEYLEFQKQKELEL------------KCPNCREPVNKNYFFTLMLKDGESPQVVPLREV 1009 Query: 53 --DEKIKAL----EVIIEKANAAPIIVAYHFNSDLARLQ--------------KAFPQGR 92 KI+AL ++ E + I+V F+S L L+ F Sbjct: 1010 AKSAKIEALLKHCSILQETSPGEQIVVFSQFSSFLDILETELANTFLGNGVKVYKFDGRL 1069 Query: 93 TLDKDPCTIQEWNEGK---IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIE 149 L + ++ ++ +L + G GLNL + WW Q I+ Sbjct: 1070 NLKERAAVLENFSTKDFDNQKVLLMSLKTGGVGLNLTC-ASYAFMMDPWWSPSMEDQAID 1128 Query: 150 RIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 RI + G V V I +N+I+E +L+ K TI + ++A + E Sbjct: 1129 RI-----HRIGQINQVKVTRFIVENSIEEKMLKIQERKRTIGEA-MDADEDE 1174 >gi|71033491|ref|XP_766387.1| hypothetical protein [Theileria parva strain Muguga] gi|68353344|gb|EAN34104.1| hypothetical protein TP01_0866 [Theileria parva] Length = 1816 Score = 95.4 bits (236), Expect = 4e-18, Method: Composition-based stats. Identities = 35/224 (15%), Positives = 82/224 (36%), Gaps = 39/224 (17%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQL---ANGA--VYYDEEKH-WKEV---H 52 + Y + R + +S C++L N Y E++ W + Sbjct: 1065 RNYEELARN----------SGGSRSSLQNICMELKKVCNHPFLCYEPEDRQVWLQGLIYG 1114 Query: 53 DEKIKALEVIIEKAN--AAPIIVAYHFNSDLARL-----QKAFPQGRT-----LDKDPCT 100 KI L+ ++++ +++ L + + F R + Sbjct: 1115 SGKICLLDKLLQRLKEKGHRVLIFSQMVRMLNIISEYLTLRGFKHQRLDGTMGKEVRKKA 1174 Query: 101 IQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQ 158 + +N+ + + G G+NL + ++ + W+ + Q R + Sbjct: 1175 MDHFNDPQSDDFCFLLSTKAGGLGINLT-SADTVIIYDSDWNPQNDLQAEAR-----AHR 1228 Query: 159 AGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKET 202 G + V +Y L+ +++I++ +L+R +TK + L++ L K Sbjct: 1229 IGQTKTVQIYRLVTKDSIEQTILERAKTKMVLDALVVQGLNKRG 1272 >gi|169863208|ref|XP_001838226.1| SNF2-family ATP dependent chromatin remodeling factor snf21 [Coprinopsis cinerea okayama7#130] gi|116500699|gb|EAU83594.1| SNF2-family ATP dependent chromatin remodeling factor snf21 [Coprinopsis cinerea okayama7#130] Length = 904 Score = 95.4 bits (236), Expect = 4e-18, Method: Composition-based stats. Identities = 27/166 (16%), Positives = 63/166 (37%), Gaps = 24/166 (14%) Query: 52 HDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQKAFPQ------------GRTLDKD 97 K+ L+ ++ + +++ F + L ++ + LD+ Sbjct: 624 ASGKMMVLDRLLRELFRRGHKVLLFSQFTTMLDIIEDWAVENMGWSICRIDGSSSPLDRK 683 Query: 98 PCTIQEWNEGKIP----LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGV 153 + G P L + G G+NL + ++F+ W+ + Q Sbjct: 684 AEMERFQTGGDDPDAPRLFLLSTRAGGLGINL-VAADTVIFYDQDWNPQMDAQA-----Q 737 Query: 154 TRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 R + G + V ++ L++ +TI+ ++QR K ++ L++ K Sbjct: 738 DRAHRIGQTKPVLIFRLVSAHTIETNIMQRAAEKRKLEALVIAKGK 783 >gi|156843751|ref|XP_001644941.1| hypothetical protein Kpol_1025p2 [Vanderwaltozyma polyspora DSM 70294] gi|156115595|gb|EDO17083.1| hypothetical protein Kpol_1025p2 [Vanderwaltozyma polyspora DSM 70294] Length = 1507 Score = 95.4 bits (236), Expect = 4e-18, Method: Composition-based stats. Identities = 26/159 (16%), Positives = 61/159 (38%), Gaps = 20/159 (12%) Query: 52 HDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARL----------QKAFPQGRTLDKDPC 99 K+ L+ ++ + + +++ L + + + Sbjct: 720 SSGKMVLLDQLLTRLKRDGHRVLIFSQMVRMLDIMGDYLSIKGINFQRLDGTVPSAQRRI 779 Query: 100 TIQEWNEGKI--PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 I +N + + G G+NL + ++ F W+ + Q + R Sbjct: 780 AIDHFNAPDSNDDVFLLSTRAGGLGINLMT-ADTVIIFDSDWNPQADLQAMAR-----AH 833 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + G K V VY L++++T++E VL+R R K ++ +++ Sbjct: 834 RIGQKNHVMVYRLVSKDTVEEEVLERARKKMILEYAIIS 872 >gi|66362430|ref|XP_628179.1| CHD3 ortholog with 2x chromodomains plus SNF2 ATpase (2chromo+helicase+Znf_NFX) [Cryptosporidium parvum Iowa II] gi|46227356|gb|EAK88291.1| CHD3 ortholog with 2x chromodomains plus SNF2 ATpase (2chromo+helicase+Znf_NFX) [Cryptosporidium parvum Iowa II] Length = 2055 Score = 95.4 bits (236), Expect = 4e-18, Method: Composition-based stats. Identities = 24/158 (15%), Positives = 60/158 (37%), Gaps = 20/158 (12%) Query: 55 KIKALEVIIEKA--NAAPIIVAYHFNSDLARLQ----------KAFPQGRTLDKDPCTIQ 102 K+ L+ ++ + + +++ L + + + + Sbjct: 873 KLCLLDKLLSRLREKGSRVLIFSQMVRMLNIISEFLVLRGFRHQRLDGTMGKELRKKAMD 932 Query: 103 EWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 +N + G G+NL + ++ + W+ + Q R + G Sbjct: 933 HFNSPNSDDFCFLLSTKAGGLGINLTT-ADTVIIYDSDWNPQNDLQAEAR-----AHRIG 986 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNAL 198 K+ V +Y L+ +++I+E +L+R +TK + L++ L Sbjct: 987 QKKQVQIYRLVTKDSIEENILERAKTKMVLDTLVVQGL 1024 >gi|323309655|gb|EGA62863.1| Swr1p [Saccharomyces cerevisiae FostersO] Length = 1390 Score = 95.4 bits (236), Expect = 4e-18, Method: Composition-based stats. Identities = 33/175 (18%), Positives = 73/175 (41%), Gaps = 19/175 (10%) Query: 29 TVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQK 86 + QL +K + K++ L +++++ N ++ L L++ Sbjct: 1221 SNPLHQLQTKLTIAFPDKSLLQYDCGKLQKLAILLQQLKDNGHRALIFTQMTKVLDVLEQ 1280 Query: 87 AF---------PQGRTLDKDPCTI-QEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFF 135 G T +D + + +N + +I + S G G+NL G + ++F+ Sbjct: 1281 FLNYHGYLYMRLDGATKIEDRQILTERFNTDSRITVFILSSRSGGLGINLT-GADTVIFY 1339 Query: 136 SLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 W+ +Q +R + G R V +Y ++++TI+ +L++ + K TI Sbjct: 1340 DSDWNPAMDKQCQDRC-----HRIGQTRDVHIYRFVSEHTIESNILKKSQPKKTI 1389 >gi|156051590|ref|XP_001591756.1| hypothetical protein SS1G_07202 [Sclerotinia sclerotiorum 1980] gi|154704980|gb|EDO04719.1| hypothetical protein SS1G_07202 [Sclerotinia sclerotiorum 1980 UF-70] Length = 1805 Score = 95.4 bits (236), Expect = 4e-18, Method: Composition-based stats. Identities = 32/142 (22%), Positives = 59/142 (41%), Gaps = 20/142 (14%) Query: 69 APIIVAYHFNSDLAR-----LQKAFPQGRTL--------DKDPCTIQEWN-EGKIPLLFA 114 +V L L+K P + L +K + ++N + +L Sbjct: 1586 HRALVFCQMKEMLDMVQNDVLKKMLPSVQFLRMDGSVDANKRQDIVNKFNSDPSYDVLLL 1645 Query: 115 HPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQN 174 + G GLNL G + ++F W+ ++ Q ++R + G K+ V VY LI + Sbjct: 1646 TTSVGGLGLNLT-GADTVIFVEHDWNPQKDLQAMDR-----AHRIGQKKVVNVYRLITRG 1699 Query: 175 TIDELVLQRLRTKSTIQDLLLN 196 T++E +L R K + ++N Sbjct: 1700 TLEEKILSLQRFKIDVASTVVN 1721 >gi|298710909|emb|CBJ49262.1| conserved unknown protein [Ectocarpus siliculosus] Length = 1332 Score = 95.4 bits (236), Expect = 4e-18, Method: Composition-based stats. Identities = 36/155 (23%), Positives = 64/155 (41%), Gaps = 20/155 (12%) Query: 55 KIKALEVIIEKANAA--PIIVAYHFNSDLARLQ---------KAFPQGRTLDKDPCT-IQ 102 K+K+LE ++ K + ++V + L L+ G T K+ I Sbjct: 876 KMKSLETLLAKFHETRDKVLVFSWSTAMLDVLESFVGAKGYVYRRLDGTTSSKERQARIN 935 Query: 103 EWNEGK--IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 E+N + + + + G GLNL + + +V + + W+ Q R + G Sbjct: 936 EFNSDRAGVFVFLISTRAGGQGLNL-HTASRVVLYDVNWNPALGLQA-----QDRAYRIG 989 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 KR V V+ LI++ TI+E+ R K I + Sbjct: 990 QKRKVAVFRLISKGTIEEMCYMRQIYKLQITSAAM 1024 >gi|260801499|ref|XP_002595633.1| hypothetical protein BRAFLDRAFT_200949 [Branchiostoma floridae] gi|229280880|gb|EEN51645.1| hypothetical protein BRAFLDRAFT_200949 [Branchiostoma floridae] Length = 1464 Score = 95.4 bits (236), Expect = 4e-18, Method: Composition-based stats. Identities = 26/140 (18%), Positives = 50/140 (35%), Gaps = 17/140 (12%) Query: 67 NAAPIIVAYHFNSDLARLQK----------AFPQGRTLDKDPCTIQEWNEG-KIPLLFAH 115 +++ L +++ T+ I ++N+ I + Sbjct: 863 QGHRVLLFSQSKQMLDLMEEFVQDQSYTYMRMDGTTTISSRQPKITKFNKDTSIFVFLLT 922 Query: 116 PASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNT 175 G G+NL G N ++ F W+ Q ER + G + V +Y L+ T Sbjct: 923 TRVGGLGVNLT-GANRVIIFDPDWNPSTDMQARERAW-----RIGQSKDVTIYRLLTTGT 976 Query: 176 IDELVLQRLRTKSTIQDLLL 195 I+E + R K + + +L Sbjct: 977 IEEKIYHRQIFKQFLTNRVL 996 >gi|321263641|ref|XP_003196538.1| helicase [Cryptococcus gattii WM276] gi|317463015|gb|ADV24751.1| Helicase, putative [Cryptococcus gattii WM276] Length = 926 Score = 95.4 bits (236), Expect = 4e-18, Method: Composition-based stats. Identities = 28/149 (18%), Positives = 58/149 (38%), Gaps = 22/149 (14%) Query: 67 NAAPIIVAYHFNSDLARLQ------KAFPQGRTLDKDPC-----TIQEWNEGK-----IP 110 +++ F + L ++ K + R + E+N GK Sbjct: 662 KGHRVLLFSQFTTMLDVIEDWATVYKGWKVCRIDGSTSQESRREQMDEFNGGKDDPDACK 721 Query: 111 LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYL 170 L + G G+NL + ++FF W+ + Q R + G + V V+ L Sbjct: 722 LFLLSTRAGGLGINL-VSADTVIFFDQDWNPQMDLQA-----QDRAHRIGQTKPVLVFRL 775 Query: 171 IAQNTIDELVLQRLRTKSTIQDLLLNALK 199 ++ +TI+ +L + K ++ L+++ K Sbjct: 776 VSAHTIESKILAKAGNKRKLEALVISQGK 804 >gi|260785484|ref|XP_002587791.1| hypothetical protein BRAFLDRAFT_92236 [Branchiostoma floridae] gi|229272944|gb|EEN43802.1| hypothetical protein BRAFLDRAFT_92236 [Branchiostoma floridae] Length = 206 Score = 95.4 bits (236), Expect = 4e-18, Method: Composition-based stats. Identities = 38/210 (18%), Positives = 85/210 (40%), Gaps = 37/210 (17%) Query: 18 ENIEAFNSASKTVK------CLQL---ANGAVYYD--------EEKHWKEVHDEKIKALE 60 ++I+ N A K+ K +QL AN +D + K+ L+ Sbjct: 2 KDIDVVNGAGKSDKMRLLNILMQLRKCANHPYLFDGAEPGPPYTTDTHLVQNSGKMCILD 61 Query: 61 VIIE--KANAAPIIVAYHFNSDLARL---------QKAFPQGRTLDKDPCT-IQEWNEG- 107 ++ +A + +++ L L Q G+T ++ I ++N Sbjct: 62 KLLPRLQAEGSRVLIFSQMTRMLDILEDYCIWKGWQYCRLDGQTPHEERQAQINDYNRPG 121 Query: 108 -KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVF 166 + + G G+NL ++++ + W+ + Q ++R + G K+ V Sbjct: 122 SDKFIFMLSTRAGGLGINL-ATADVVLLYDSDWNPQVDLQAMDR-----AHRIGQKKQVR 175 Query: 167 VYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 V+ +IA NT+++ +++R TK + +++ Sbjct: 176 VFRMIADNTVEDRIVERAETKLKLDTIVIQ 205 >gi|312220751|emb|CBY00692.1| hypothetical protein [Leptosphaeria maculans] Length = 1566 Score = 95.4 bits (236), Expect = 4e-18, Method: Composition-based stats. Identities = 29/150 (19%), Positives = 58/150 (38%), Gaps = 20/150 (13%) Query: 61 VIIEKANAAPIIVAYHFNSDLARLQK-------------AFPQGRTLDKDPCTIQEWN-E 106 + E + +V L +Q G K + ++N + Sbjct: 1331 DLPEAVSQHRALVFCQMKEMLDMVQHNVLEKLLPSVQFMRLDGGVEATKRQEIVNKFNSD 1390 Query: 107 GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVF 166 +L + G GLNL G + ++F W+ ++ Q ++R + G K+ V Sbjct: 1391 PSYDVLLLTTSVGGLGLNLT-GADTVIFVEHDWNPQKDIQAMDR-----AHRIGQKKVVN 1444 Query: 167 VYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 VY ++ + T++E +L R K + ++N Sbjct: 1445 VYRIVTRGTLEEKILNLQRFKIDVASTVVN 1474 >gi|241949239|ref|XP_002417342.1| chromatin remodelling complex ATPase chain ISW1, pseudogene, putative [Candida dubliniensis CD36] gi|223640680|emb|CAX44987.1| chromatin remodelling complex ATPase chain ISW1, pseudogene, putative [Candida dubliniensis CD36] Length = 1017 Score = 95.4 bits (236), Expect = 4e-18, Method: Composition-based stats. Identities = 43/225 (19%), Positives = 87/225 (38%), Gaps = 43/225 (19%) Query: 7 FQRELYCDLQGENIEAFNSAS--------KTVKCLQLAN-------------GAVYYDEE 45 Q+ LY + ++I+A N A+ +QL G Y +E Sbjct: 374 MQKNLYQKILEKDIDAVNGANGKKESKTRLLNIVMQLRKCCNHPYLFEGVEPGPPYTTDE 433 Query: 46 KHWKEVHDEKIKALEVIIE--KANAAPIIVAYHFNSDLARL---------QKAFPQGRTL 94 + +K+ L+ +++ + + +++ + L L Q G+T Sbjct: 434 HLV--FNSQKMLILDQLLKKFQQEGSRVLIFSQMSRMLDILEDYCYFREYQYCRIDGQTE 491 Query: 95 DKDP-CTIQEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERI 151 D I E+N+ + + + G G+NL +I++ F W+ + Q ++R Sbjct: 492 HSDRINAIDEYNKPGSEKFIFLLTTRAGGLGINLT-SADIVILFDSDWNPQADLQAMDR- 549 Query: 152 GVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + G + V V+ I + I+E VL+R K + L++ Sbjct: 550 ----AHRIGQTKQVKVFRFITERAIEEKVLERAAQKLRLDQLVIQ 590 >gi|213408989|ref|XP_002175265.1| DNA repair protein rad5 [Schizosaccharomyces japonicus yFS275] gi|212003312|gb|EEB08972.1| DNA repair protein rad5 [Schizosaccharomyces japonicus yFS275] Length = 850 Score = 95.4 bits (236), Expect = 4e-18, Method: Composition-based stats. Identities = 26/138 (18%), Positives = 53/138 (38%), Gaps = 17/138 (12%) Query: 69 APIIVAYHFNSDLARLQKAFP-----------QGRTLDKDPCTIQEWNEGKIPLLFAHPA 117 I+ F S L L+ Q + D++ + + ++ +L Sbjct: 690 RKTIIFSQFTSMLDLLEPHLRNAGIGFVRYDGQMKNKDREDALNKLRTKSEVQVLLCSLK 749 Query: 118 SCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 GLNL + ++ +WW+ +Q I+R+ + G K V VY + +T++ Sbjct: 750 CGALGLNLTC-ASRVILLDVWWNPAVEEQAIDRV-----HRIGQKHDVDVYKITIADTVE 803 Query: 178 ELVLQRLRTKSTIQDLLL 195 E ++ K + D + Sbjct: 804 ERIVALQDKKRELADGAI 821 >gi|138894942|ref|YP_001125395.1| Patative DNA/RNA helicase [Geobacillus thermodenitrificans NG80-2] gi|196248491|ref|ZP_03147192.1| Non-specific serine/threonine protein kinase [Geobacillus sp. G11MC16] gi|134266455|gb|ABO66650.1| Patative DNA/RNA helicase SNF2 family [Geobacillus thermodenitrificans NG80-2] gi|196212216|gb|EDY06974.1| Non-specific serine/threonine protein kinase [Geobacillus sp. G11MC16] Length = 874 Score = 95.4 bits (236), Expect = 4e-18, Method: Composition-based stats. Identities = 43/214 (20%), Positives = 86/214 (40%), Gaps = 35/214 (16%) Query: 5 HKFQRELYCDLQGENIEAFNSASKTVKCLQLAN--GAVYYD-EEKHWKEVHDEKIKALEV 61 + R + + + N + QL GA+ E+ +KEV K+K Sbjct: 650 KEIARSMLATKESGQVAILN---MITRLRQLYGHPGAIIPKYEQLSYKEVP--KLKETMH 704 Query: 62 IIEK--ANAAPIIVAYHFNSDLARLQKAF----------PQGRTLDKDPCTIQEWNEGK- 108 IIE ++ F L++ F G T ++ +Q +NE + Sbjct: 705 IIEAIRQKGEKALIFTEFRKLHFLLKRIFMETYGISVPVIDGDTKNRQ-LIVQHFNETQG 763 Query: 109 IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVY 168 ++ P + G GL + N ++ ++ WW+ Q +R + G ++ V+VY Sbjct: 764 FGIMILSPKAAGVGLTIT-SANHVIHYTRWWNPAVENQATDR-----AYRIGQQKDVYVY 817 Query: 169 YLIA-------QNTIDELVLQRLRTKSTIQDLLL 195 ++I Q T++EL+ + L +K + + ++ Sbjct: 818 HIITRDSSHFPQGTVEELMHELLESKRHLAENVI 851 >gi|167535306|ref|XP_001749327.1| hypothetical protein [Monosiga brevicollis MX1] gi|163772193|gb|EDQ85848.1| predicted protein [Monosiga brevicollis MX1] Length = 1151 Score = 95.4 bits (236), Expect = 4e-18, Method: Composition-based stats. Identities = 27/160 (16%), Positives = 58/160 (36%), Gaps = 22/160 (13%) Query: 52 HDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQKAFPQ-----------GRTLDKDP 98 H K+ L ++ + +++ L + +T D+ Sbjct: 556 HSGKLACLNDLLPRLRRGGHRVLIFSQSRKFLQAVASVLDHHGLTFQQLDGSVKTADERQ 615 Query: 99 CTIQEWNE---GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTR 155 + ++N+ ++ + G GL L G N ++ W+ Q ++R Sbjct: 616 ALVDKFNKATTDELFAMLLTTQVGGVGLTLT-GANRVIICDPSWNPSVDAQAVDR----- 669 Query: 156 QRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 + G R V VY L+ TI+E + ++ K ++Q + Sbjct: 670 AYRIGQTREVLVYRLVTCGTIEEKMYRKQIFKGSLQRSAM 709 >gi|327281454|ref|XP_003225463.1| PREDICTED: lymphoid-specific helicase-like [Anolis carolinensis] Length = 811 Score = 95.4 bits (236), Expect = 4e-18, Method: Composition-based stats. Identities = 20/139 (14%), Positives = 52/139 (37%), Gaps = 17/139 (12%) Query: 68 AAPIIVAYHFNSDLARLQK----------AFPQGRTLDKDPCTIQEWNEG-KIPLLFAHP 116 +++ L L + + + ++N+ ++ + Sbjct: 589 GHKVLLFSQMTQMLDILMDYCYLRNYQFSRLDGSMSYTERDENMSKFNKDQEVFIFLLST 648 Query: 117 ASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTI 176 + G G+NL + ++ + W+ + Q +R + G + V VY + NTI Sbjct: 649 RAGGLGINLT-AADTVIIYDSDWNPQCDLQAQDRC-----HRIGQTKPVVVYRFVTANTI 702 Query: 177 DELVLQRLRTKSTIQDLLL 195 D+ +++ K ++ L++ Sbjct: 703 DQKIVETAAAKRKLEKLVI 721 >gi|302411025|ref|XP_003003346.1| DNA repair and recombination protein RAD26 [Verticillium albo-atrum VaMs.102] gi|261358370|gb|EEY20798.1| DNA repair and recombination protein RAD26 [Verticillium albo-atrum VaMs.102] Length = 1117 Score = 95.4 bits (236), Expect = 4e-18, Method: Composition-based stats. Identities = 30/147 (20%), Positives = 56/147 (38%), Gaps = 18/147 (12%) Query: 68 AAPIIVAYHFNSDLARLQKAFPQGRT-----------LDKDPCTIQEWN-EGKIPLLFAH 115 ++ L ++K T ++K I ++N + +I + Sbjct: 698 GHKTLLFSQSKMMLNVIEKFLGGLETVKYVRMDGETSIEKRQSLIDQFNTDPEIDIFLLT 757 Query: 116 PASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNT 175 + G G+NL G N ++ F W+ Q ER + G R+V +Y L+ T Sbjct: 758 TRTGGLGVNLT-GANRIIIFDPDWNPSTDMQARERAW-----RLGQTRSVEIYRLMTAGT 811 Query: 176 IDELVLQRLRTKSTIQDLLLNALKKET 202 I+E + R K + + +L K+ Sbjct: 812 IEEKIYHRQIFKQFMTNKVLKDPKQRA 838 >gi|189204870|ref|XP_001938770.1| DNA repair and recombination protein RAD26 [Pyrenophora tritici-repentis Pt-1C-BFP] gi|187985869|gb|EDU51357.1| DNA repair and recombination protein RAD26 [Pyrenophora tritici-repentis Pt-1C-BFP] Length = 1246 Score = 95.4 bits (236), Expect = 4e-18, Method: Composition-based stats. Identities = 32/163 (19%), Positives = 59/163 (36%), Gaps = 20/163 (12%) Query: 53 DEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAFPQ------------GRTLDKDP 98 K++ ++ ++ K ++ L LQK Q D+ Sbjct: 757 SGKMQVVKELLSLWKKGGHKTLLFAQHRIMLDILQKFISQLPDINWRRMDGDTPIKDRQN 816 Query: 99 CTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQ 158 + N + + G G+NL G N ++ + W+ Q ER + Sbjct: 817 LVDEFNNNPDLHVFLLTTKVGGLGVNLT-GANRVIIYDPDWNPSTDIQARERSW-----R 870 Query: 159 AGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 G KR V +Y L++ TI+E + R K + + +L K+ Sbjct: 871 LGQKREVEIYRLMSAGTIEEKIYHRQIFKQFLTNKVLKDPKQR 913 >gi|194899384|ref|XP_001979240.1| GG14296 [Drosophila erecta] gi|190650943|gb|EDV48198.1| GG14296 [Drosophila erecta] Length = 1077 Score = 95.4 bits (236), Expect = 5e-18, Method: Composition-based stats. Identities = 37/168 (22%), Positives = 67/168 (39%), Gaps = 22/168 (13%) Query: 49 KEVHDEKIKALEVIIE----KANAAPIIVAYHFNSDLARLQKAFPQ---------GRTLD 95 KI + I++ K++ IV + S L L++ + G Sbjct: 878 IHRPSSKINMVMQILKTSILKSSDDKAIVVSQWTSVLDILREHLSKDGVPTLSLNGSIPV 937 Query: 96 KDPCTI-QEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIG 152 K+ I ++NE +L + G GLNL G N L+ L W+ + Q +RI Sbjct: 938 KNRQDIVNQFNERNNQKRVLLLSLTAGGVGLNL-IGANHLLLLDLHWNPQLEAQAQDRI- 995 Query: 153 VTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKK 200 + G K+ V +Y + +T+++ + K + D +L K+ Sbjct: 996 ----YRVGQKKNVIIYKFMCVDTVEQRIKALQDKKLDLADGVLTGAKR 1039 >gi|159110197|ref|XP_001705360.1| Chromodomain helicase-DNA-binding protein, putative [Giardia lamblia ATCC 50803] gi|157433443|gb|EDO77686.1| Chromodomain helicase-DNA-binding protein, putative [Giardia lamblia ATCC 50803] Length = 2645 Score = 95.4 bits (236), Expect = 5e-18, Method: Composition-based stats. Identities = 32/201 (15%), Positives = 71/201 (35%), Gaps = 29/201 (14%) Query: 19 NIEAFNSASKTVKCLQL---ANGAVYYDEEK------HWKEVHDEKIKALEVIIEKAN-- 67 +++NS +QL N + K K + L+ +++K N Sbjct: 1545 TAKSYNSVKLQNLLMQLRKVCNHPYIIHDLKLHTANLKDIVDGSGKFQVLDKLLDKLNSE 1604 Query: 68 AAPIIVAYHFNSDLARLQ----------KAFPQGRTLDKDPCTIQEWNEG--KIPLLFAH 115 +++ L L+ + T ++ I +NE K + Sbjct: 1605 GHRVLIFSQLIKTLDILERYCFYKKYKFQRLQGSMTSEQRRRAINNFNEKNSKDFIFLLS 1664 Query: 116 PASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNT 175 S G G+NL + ++ F ++ Q R+ + G + V +Y L+ +++ Sbjct: 1665 TRSGGQGINL-ATADTVIIFDADYNPHNDLQAAGRV-----HRIGQSKPVTIYRLVTRDS 1718 Query: 176 IDELVLQRLRTKSTIQDLLLN 196 ++E +L K + ++ Sbjct: 1719 VEERILDIGHRKLMLDYAIIQ 1739 >gi|302829332|ref|XP_002946233.1| hypothetical protein VOLCADRAFT_120230 [Volvox carteri f. nagariensis] gi|300269048|gb|EFJ53228.1| hypothetical protein VOLCADRAFT_120230 [Volvox carteri f. nagariensis] Length = 1596 Score = 95.4 bits (236), Expect = 5e-18, Method: Composition-based stats. Identities = 41/226 (18%), Positives = 80/226 (35%), Gaps = 42/226 (18%) Query: 6 KFQRELYCDLQGENIE---AFNSASKTVKCLQ--------------LANGA------VYY 42 K ++ L+C L E +E A+ ++++ + L+ + N Sbjct: 701 KMEQVLFCTLVSEQLELYRAYLASTEVGEILEGSRRALCGIDILRKICNHPDLLERVTAQ 760 Query: 43 DEEKHWKEVHDEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQK----------AFPQ 90 D E + K++ E ++ + ++ L L+K Sbjct: 761 DAEDYGNPARSGKLRVAERVLTSWHTARQKALLFCQTQQMLDILEKLVAGRGWSYHRMDG 820 Query: 91 GRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIE 149 G + P I ++N + + G G+NL G ++ + W+ Q E Sbjct: 821 GTPVAVRPRLIDDFNTNPDVFVFLLTTKVGGLGVNLT-GATRVMLYDPDWNPSTDIQARE 879 Query: 150 RIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 R + G +V +Y LI TI+E + R KS + + +L Sbjct: 880 RAW-----RIGQSHSVTIYRLITAGTIEEKIYHRQIYKSFLTNKVL 920 >gi|302814766|ref|XP_002989066.1| hypothetical protein SELMODRAFT_450679 [Selaginella moellendorffii] gi|300143167|gb|EFJ09860.1| hypothetical protein SELMODRAFT_450679 [Selaginella moellendorffii] Length = 1043 Score = 95.4 bits (236), Expect = 5e-18, Method: Composition-based stats. Identities = 32/142 (22%), Positives = 53/142 (37%), Gaps = 17/142 (11%) Query: 65 KANAAPIIVAYHFNSDLARLQ----------KAFPQGRTLDKDPCTIQEWNEGK-IPLLF 113 K ++V L ++ + ++ + P I E+NE + + Sbjct: 645 KDQGHRVLVFCQTQQMLDIVEIFVESQGYTYRRMDGSTSVKQRPALIDEFNESSHVFVFL 704 Query: 114 AHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQ 173 G G NL G N ++ F W+ Q ER + G + V VY LI + Sbjct: 705 LTTKVGGLGTNLT-GANRVIIFDPDWNPSTDMQARERAW-----RIGQTKDVIVYRLITR 758 Query: 174 NTIDELVLQRLRTKSTIQDLLL 195 TI+E V R K + + +L Sbjct: 759 GTIEEKVYHRQIYKQFLTNKIL 780 >gi|159467545|ref|XP_001691952.1| SNF2 superfamily protein [Chlamydomonas reinhardtii] gi|158278679|gb|EDP04442.1| SNF2 superfamily protein [Chlamydomonas reinhardtii] Length = 1254 Score = 95.4 bits (236), Expect = 5e-18, Method: Composition-based stats. Identities = 33/138 (23%), Positives = 57/138 (41%), Gaps = 17/138 (12%) Query: 57 KALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWN-EGKIPLLFAH 115 KAL ++E+ AP V+Y G +Q +N + I +L Sbjct: 1128 KALLDLVERDLLAPYGVSYL----------RLDGGVEAGARFAVVQRFNADPTIDVLLLT 1177 Query: 116 PASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNT 175 G GLNL + +VF W+ + Q ++R + G +R V VY ++ + T Sbjct: 1178 TGVGGVGLNLT-AADTVVFLEHDWNPMKDMQAMDR-----AHRLGQRRTVNVYRILTRGT 1231 Query: 176 IDELVLQRLRTKSTIQDL 193 ++E VL + K + + Sbjct: 1232 LEERVLGLQQFKKDVAEA 1249 >gi|308160430|gb|EFO62921.1| Chromodomain helicase-DNA-binding protein, putative [Giardia lamblia P15] Length = 2647 Score = 95.4 bits (236), Expect = 5e-18, Method: Composition-based stats. Identities = 32/201 (15%), Positives = 71/201 (35%), Gaps = 29/201 (14%) Query: 19 NIEAFNSASKTVKCLQL---ANGAVYYDEEK------HWKEVHDEKIKALEVIIEKAN-- 67 +++NS +QL N + K K + L+ +++K N Sbjct: 1547 TAKSYNSVKLQNLLMQLRKVCNHPYIIHDLKLHTASLRDIVDGSGKFQVLDKLLDKLNSE 1606 Query: 68 AAPIIVAYHFNSDLARLQ----------KAFPQGRTLDKDPCTIQEWNEG--KIPLLFAH 115 +++ L L+ + T ++ I +NE K + Sbjct: 1607 GHRVLIFSQLIKTLDILERYCFYKKYKFQRLQGSMTSEQRRRAINNFNEKNSKDFIFLLS 1666 Query: 116 PASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNT 175 S G G+NL + ++ F ++ Q R+ + G + V +Y L+ +++ Sbjct: 1667 TRSGGQGINL-ATADTVIIFDADYNPHNDLQAAGRV-----HRIGQSKPVTIYRLVTRDS 1720 Query: 176 IDELVLQRLRTKSTIQDLLLN 196 ++E +L K + ++ Sbjct: 1721 VEERILDIGHRKLMLDYAIIQ 1741 >gi|156847192|ref|XP_001646481.1| hypothetical protein Kpol_1048p54 [Vanderwaltozyma polyspora DSM 70294] gi|156117158|gb|EDO18623.1| hypothetical protein Kpol_1048p54 [Vanderwaltozyma polyspora DSM 70294] Length = 1902 Score = 95.4 bits (236), Expect = 5e-18, Method: Composition-based stats. Identities = 28/122 (22%), Positives = 52/122 (42%), Gaps = 8/122 (6%) Query: 77 FNSDLARLQKAFPQGRTLDKDPC-TIQEWNE-GKIPLLFAHPASCGHGLNLQYGGNILVF 134 F + + G +D ++++NE I L G GLNL G + ++F Sbjct: 1706 FKKYMPSVTYMRLDGSVDPRDRQKVVRKFNEDPSIDCLLLTTKVGGLGLNLT-GADTVIF 1764 Query: 135 FSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 W+ Q ++R + G K+ V VY +I + T++E ++ + K I + Sbjct: 1765 IEHDWNPMNDLQAMDR-----AHRLGQKKVVNVYRIITKGTLEEKIMGLQKFKMNIASTV 1819 Query: 195 LN 196 +N Sbjct: 1820 VN 1821 >gi|47206405|emb|CAG01534.1| unnamed protein product [Tetraodon nigroviridis] Length = 1491 Score = 95.4 bits (236), Expect = 5e-18, Method: Composition-based stats. Identities = 31/171 (18%), Positives = 66/171 (38%), Gaps = 20/171 (11%) Query: 42 YDEEKHWKEVHDEKIKALEVIIEKAN--AAPIIVAYHFNSDLARL-----QKAFPQGRTL 94 Y+E+ K+ L+ ++ + +++ L L +K +P R Sbjct: 810 YEEQLQAVVRGSGKLVLLDKLLTRLRERGNRVLIFSQMVRMLDILAEYLTRKRYPFQRLD 869 Query: 95 DK-----DPCTIQEWN-EGKIPL-LFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQM 147 + +N EG + G G+NL + +V F W+ + Q Sbjct: 870 GSIKGEIRKQALDHFNAEGSEDFCFLLSTRAGGLGINL-ASADTVVIFDSDWNPQNDLQA 928 Query: 148 IERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNAL 198 R + G K+ V +Y L+ + T++E +++R + K + L++ + Sbjct: 929 QAR-----AHRIGQKKQVNIYRLVTKGTVEEDIIERAKKKMVLDHLVIQRM 974 >gi|330922223|ref|XP_003299753.1| hypothetical protein PTT_10809 [Pyrenophora teres f. teres 0-1] gi|311326467|gb|EFQ92163.1| hypothetical protein PTT_10809 [Pyrenophora teres f. teres 0-1] Length = 1302 Score = 95.4 bits (236), Expect = 5e-18, Method: Composition-based stats. Identities = 30/169 (17%), Positives = 62/169 (36%), Gaps = 26/169 (15%) Query: 52 HDEKIKALEVIIEK---ANAAPIIVAYHFNSDL--------------ARLQKAFPQGRT- 93 K LE +++ A I++ F L R + G T Sbjct: 657 ASGKFILLEKLLKHTVFAQGKKILIFSSFTRTLDHCEDLLSLISNHGERFKSLRLDGSTS 716 Query: 94 LDKDPCTIQEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERI 151 + I+ +N+ ++ + G G+NL + ++F W+ + Q R Sbjct: 717 RARRNLDIRLFNQKGSDYKVMLLSTRAGGLGINLTSAED-VIFLDEDWNPQITLQAEAR- 774 Query: 152 GVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKK 200 + G + V +Y L Q T++E ++ R+R K + + +++ Sbjct: 775 ----AHRIGQTKKVTIYKLCTQGTVEEQMMGRIRKKLYLSAKITESMQS 819 >gi|301622634|ref|XP_002940630.1| PREDICTED: hypothetical protein LOC100494134 [Xenopus (Silurana) tropicalis] Length = 914 Score = 95.4 bits (236), Expect = 5e-18, Method: Composition-based stats. Identities = 24/114 (21%), Positives = 51/114 (44%), Gaps = 8/114 (7%) Query: 86 KAFPQGRTLDKDPCTI-QEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEE 143 G T + + + +N + +I S G G+NL G + ++F+ W+ Sbjct: 19 YLRLDGSTRVEQRQVLMERFNMDRRIFCFILSTRSGGVGINLT-GADTVIFYDSDWNPTM 77 Query: 144 HQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 Q +R + G R V +Y L+++ T++E +L++ + K + D+ + Sbjct: 78 DAQAQDRC-----HRIGQTRDVHIYRLVSERTVEENILKKAQQKRMLGDMAIEG 126 >gi|296123773|ref|YP_003631551.1| SNF2-related protein [Planctomyces limnophilus DSM 3776] gi|296016113|gb|ADG69352.1| SNF2-related protein [Planctomyces limnophilus DSM 3776] Length = 872 Score = 95.4 bits (236), Expect = 5e-18, Method: Composition-based stats. Identities = 36/184 (19%), Positives = 69/184 (37%), Gaps = 24/184 (13%) Query: 27 SKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANA---APIIVAYHFNSDLAR 83 + + C AN D++ K+ L + ++ IV + L Sbjct: 598 KELLYCRLAANSPELVDDQ---IVGESSKLDRLSEMFDEMFEGHFEKAIVFSEWTRMLDL 654 Query: 84 LQKAFP-----------QGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNIL 132 ++ Q ++ Q ++ +L A A+ GLNLQ +I+ Sbjct: 655 IEPLLDSRNLPYVRIDGQVSQRERAASVSQFEDDPGTRVLLASNAAA-TGLNLQ-AASIV 712 Query: 133 VFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQD 192 + L W+ +Q I R + G ++ V VY L+ + T +E +L+ L K + Sbjct: 713 INVDLPWNPAILEQRIAR-----AHRMGQEKPVQVYVLVTEETFEERLLKTLEGKEQLAR 767 Query: 193 LLLN 196 +L+ Sbjct: 768 AVLD 771 >gi|294631185|ref|ZP_06709745.1| SNF2 domain-containing protein [Streptomyces sp. e14] gi|292834518|gb|EFF92867.1| SNF2 domain-containing protein [Streptomyces sp. e14] Length = 730 Score = 95.4 bits (236), Expect = 5e-18, Method: Composition-based stats. Identities = 43/197 (21%), Positives = 74/197 (37%), Gaps = 30/197 (15%) Query: 14 DLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKA--NAAPI 71 +L + EA+ A + + + A Y EK K+ L I+ +A N Sbjct: 496 ELSASDEEAYREAVRAGNFMAMRRAA-YARPEK------SAKLDRLREIVREAAENGRKT 548 Query: 72 IVAYHFNSDLARLQKAFP--------------QGRTLDKDPCTIQEWNEGKIP-LLFAHP 116 +V HF L + +A + + ++ + P +L A Sbjct: 549 VVFSHFKDVLGVVGEALAPAPGGSVPVFGPLTGAVPAARRQRIVDDFGGVRGPAVLLAQI 608 Query: 117 ASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTI 176 + G GLNLQ +++V QQ + R + G R V V+ L+A + Sbjct: 609 QAAGVGLNLQ-AASVVVLCEPQVKPTAEQQAVAR-----AHRMGQIRPVRVHRLLATGGV 662 Query: 177 DELVLQRLRTKSTIQDL 193 DE +++ L KS + D Sbjct: 663 DERLVRLLERKSRLFDA 679 >gi|254577895|ref|XP_002494934.1| ZYRO0A13244p [Zygosaccharomyces rouxii] gi|238937823|emb|CAR26001.1| ZYRO0A13244p [Zygosaccharomyces rouxii] Length = 1883 Score = 95.4 bits (236), Expect = 5e-18, Method: Composition-based stats. Identities = 35/212 (16%), Positives = 74/212 (34%), Gaps = 33/212 (15%) Query: 1 MKQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEK--IKA 58 +KQ + ++ + DL ++A K + L ++ D K + Sbjct: 1604 LKQVESYLKQTHMDLHD-----ISNAPKLLALRNLLFEC------GIGEQDIDRKSPVNQ 1652 Query: 59 LEVIIEKANAAPIIVAYHFNSDLARLQK-------------AFPQGRTLDKDPCTIQEWN 105 L + + ++ L ++ ++++N Sbjct: 1653 LPSTVNVISQHRALIFCQLKDMLDMVENDLFKRYMPSVTYMRLDGSVEARDRQKVVRKFN 1712 Query: 106 E-GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA 164 E I L G GLNL G + ++F W+ Q ++R + G K+ Sbjct: 1713 EDPSIDCLLLTTKVGGLGLNLT-GADTVIFVEHDWNPMNDLQAMDR-----AHRLGQKKV 1766 Query: 165 VFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 V VY ++ + T++E ++ + K I ++N Sbjct: 1767 VNVYRIVTKGTLEEKIMGLQKFKMNIASTVVN 1798 >gi|198437252|ref|XP_002124935.1| PREDICTED: similar to transcription termination factor, RNA polymerase II [Ciona intestinalis] Length = 1071 Score = 95.4 bits (236), Expect = 5e-18, Method: Composition-based stats. Identities = 32/154 (20%), Positives = 60/154 (38%), Gaps = 18/154 (11%) Query: 56 IKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRT----------LDKDPCTIQEWN 105 + L+ + + ++ + S L L + K + +N Sbjct: 904 MDTLKKLSVEKPDDKCVIISQWTSMLNILAHHLAAAKFSYAVIDGSVNARKRMELVDNFN 963 Query: 106 EG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKR 163 + K ++ + G GLNL GGN L + W+ +Q +RI + G K+ Sbjct: 964 KNPVKPKIMLISLQAGGVGLNL-IGGNHLFLLDMHWNPALEKQAFDRI-----YRVGQKK 1017 Query: 164 AVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 VFV+ I + T++E +LQ K +I ++ Sbjct: 1018 EVFVHKFIMEETVEEQILQLQERKLSIAKAVMEG 1051 >gi|312376441|gb|EFR23522.1| hypothetical protein AND_12719 [Anopheles darlingi] Length = 875 Score = 95.4 bits (236), Expect = 5e-18, Method: Composition-based stats. Identities = 37/148 (25%), Positives = 66/148 (44%), Gaps = 16/148 (10%) Query: 59 LEVIIEKANAAPIIVAYHFNSD-LARLQKAF------PQGRTLDKD-PCTIQEWNEG--K 108 LE +I K I+ Y+ D +A L + + G T+ D + +N Sbjct: 594 LEDLIVKQEKVVIVSYYNKTLDMIAGLCEHYNYKHSRLDGSTVASDRSKIVATFNNAASD 653 Query: 109 IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVY 168 I +L + G GLNL G + LV + W+ Q + R+ + G R VF+Y Sbjct: 654 IFILLLSAKAGGAGLNL-IGASRLVLYDNDWNPANDLQAMSRVW-----RDGQTRTVFIY 707 Query: 169 YLIAQNTIDELVLQRLRTKSTIQDLLLN 196 L+ +I+E + QR +K+++ +++ Sbjct: 708 RLLTAFSIEERIFQRQISKTSLSGTVVD 735 >gi|313870791|gb|ADR82283.1| DNA repair protein [Blumeria graminis f. sp. tritici] Length = 883 Score = 95.0 bits (235), Expect = 5e-18, Method: Composition-based stats. Identities = 37/189 (19%), Positives = 68/189 (35%), Gaps = 30/189 (15%) Query: 27 SKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVII-EKANAAPIIVAYHFNSDLARLQ 85 +K+ K QL N A KI L I+ E+ + IV F S L ++ Sbjct: 654 TKSSKVPQLTNVA------------TSTKITQLIKILKEEVHEHKFIVFSQFTSMLNLIE 701 Query: 86 KAF-----------PQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVF 134 F R ++ + N+ K +L GLNL +++ Sbjct: 702 PFFHANDLVFSRYDGSMRNDSREASLAKLRNDKKCRILLCSLKCGSLGLNLTAATRVVIL 761 Query: 135 FSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 +W+ +Q I+R+ + K V +Y + T++E +L+ K + + Sbjct: 762 -EPFWNPFVEEQAIDRV-----HRLTQKTDVIIYKITISKTVEERILELQDKKRALANET 815 Query: 195 LNALKKETI 203 + K + Sbjct: 816 IEGGKNGGV 824 >gi|312220846|emb|CBY00787.1| similar to SNF2 family ATP-dependent chromatin-remodeling factor snf21 [Leptosphaeria maculans] Length = 1416 Score = 95.0 bits (235), Expect = 5e-18, Method: Composition-based stats. Identities = 41/225 (18%), Positives = 82/225 (36%), Gaps = 33/225 (14%) Query: 2 KQYHKF---QRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHW----KEVHD- 53 K Y + R + D +G ++ ++ +L N ++E + K +D Sbjct: 807 KLYKQLVTHNRFMVSDGKGGKTGMRGLSNMLMQLRKLCNHPFVFEEVEEVMNPTKSTNDL 866 Query: 54 -----EKIKALEVIIE--KANAAPIIVAYH------FNSDLARLQK----AFPQGRTLDK 96 K + L+ I+ +A +++ + D RL+ D Sbjct: 867 LWRSAGKFELLDRILPKFQATGHRVLMFFQMTQIMNIMEDYLRLRGMQYLRLDGATKADD 926 Query: 97 DPCTIQEWNEGKIPLL--FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 ++ +N P + G GLNLQ + ++ + W+ + Q Sbjct: 927 RSELLKLFNAPDSPYFCFLLSTRAGGLGLNLQT-ADTVIIYDSDWNPHQDLQA-----QD 980 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 R + G K V + LI N+++E +L+R K + ++ A K Sbjct: 981 RAHRIGQKNEVRILRLITSNSVEEKILERANYKLDMDGKVIQAGK 1025 >gi|255712323|ref|XP_002552444.1| KLTH0C05038p [Lachancea thermotolerans] gi|238933823|emb|CAR22006.1| KLTH0C05038p [Lachancea thermotolerans] Length = 894 Score = 95.0 bits (235), Expect = 5e-18, Method: Composition-based stats. Identities = 37/211 (17%), Positives = 68/211 (32%), Gaps = 34/211 (16%) Query: 13 CDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKA-------------- 58 L +I +S + ++ N ++ ++ E K Sbjct: 558 AQLDLSSITPSSSLALITLFKKICNSPSLISQDSYYLENIKSKSDLTGCLGLDSGKLRVL 617 Query: 59 ---LEVIIEKANAAPIIVAYHFNSDLARLQK----------AFPQGRTLDKDPCTIQEWN 105 LE I +++ ++ L +Q + ++ +N Sbjct: 618 LALLENIRSSYPQEKVVIVSNYTQTLDIIQNILTSNRFAFTRLDGNTPTKERDRIVRAFN 677 Query: 106 E-GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA 164 + S G GLNL G + LV F W+ Q + RI + G +R Sbjct: 678 TVPSLFAFLLSAKSGGVGLNL-IGASRLVLFDNDWNPAIDLQAMSRI-----HRDGQRRP 731 Query: 165 VFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 F+Y L+ IDE + QR K ++ + Sbjct: 732 CFIYRLLTTGCIDEKIFQRQLMKISLSFRFM 762 >gi|150865383|ref|XP_001384576.2| transcriptional accessory protein involved in TBP (TATA-binding protein) regulation helicase MOT1 [Scheffersomyces stipitis CBS 6054] gi|149386639|gb|ABN66547.2| transcriptional accessory protein involved in TBP (TATA-binding protein) regulation helicase MOT1 [Scheffersomyces stipitis CBS 6054] Length = 1901 Score = 95.0 bits (235), Expect = 5e-18, Method: Composition-based stats. Identities = 32/169 (18%), Positives = 64/169 (37%), Gaps = 23/169 (13%) Query: 45 EKHWKEVHDEKIKALEVIIEKAN---AAPIIVAYHFNSDLARLQKAFPQ----------- 90 + + K K + +I ++ L ++ + Sbjct: 1653 GVNDSDYSKSKRKQQQSLISSEGVISEHRALIFCQLKDMLDIVENELLKKYMPSVTYMRM 1712 Query: 91 -GRTLDKDPC-TIQEWNE-GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQM 147 G T +D ++++NE I +L G GLNL G + ++F W+ Q Sbjct: 1713 DGSTDPRDRQGIVRKFNEDPSIDVLLLTTKVGGLGLNLT-GADTVIFVEHDWNPMSDLQA 1771 Query: 148 IERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 ++R + G + V VY LI ++T++E ++ + K I ++N Sbjct: 1772 MDR-----AHRLGQTKVVNVYRLITKDTLEEKIMGLQKFKINIASTIVN 1815 >gi|299751086|ref|XP_001830045.2| transcription regulator [Coprinopsis cinerea okayama7#130] gi|298409213|gb|EAU91710.2| transcription regulator [Coprinopsis cinerea okayama7#130] Length = 1441 Score = 95.0 bits (235), Expect = 5e-18, Method: Composition-based stats. Identities = 29/170 (17%), Positives = 64/170 (37%), Gaps = 20/170 (11%) Query: 50 EVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQ----------KAFPQGRTLDKD 97 + K+ L+ ++ + + +++ L L + D Sbjct: 686 VMSSGKMVLLDKLLARLRQDGHRVLIFSQMVRMLDILSDYMTLRGYQHQRLDGMVGSDLR 745 Query: 98 PCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTR 155 I +N P + G G+NL + ++ F W+ + Q + R Sbjct: 746 KKAIAHFNAENSPDFAFLLSTRAGGLGINL-ETADTVIIFDSDWNPQNDLQAMAR----- 799 Query: 156 QRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIHV 205 + G K V VY ++++T++E VL+R + K ++ ++N + H+ Sbjct: 800 AHRIGQKSHVSVYRFVSKDTMEEDVLERAKRKMVLEYAIINQMDTTQAHL 849 >gi|238882009|gb|EEQ45647.1| SNF2-family ATP dependent chromatin remodeling factor snf21 [Candida albicans WO-1] Length = 1680 Score = 95.0 bits (235), Expect = 5e-18, Method: Composition-based stats. Identities = 43/227 (18%), Positives = 85/227 (37%), Gaps = 35/227 (15%) Query: 2 KQYHKFQRELYCDLQGEN-----IEAFNSASKTVKCLQLANG-AVYYDEEKHW---KEVH 52 K Y + R + N+ ++ ++ ++ N VY + E E + Sbjct: 1027 KLYQQMLRYNMLYAGDPANGSVPVTIKNANNQIMQLKKICNHPFVYEEVENLINPNIETN 1086 Query: 53 DE------KIKALEVIIEK--ANAAPIIVAYH------FNSDLAR---LQKAFPQGRTLD 95 D+ K + L+ ++ K A +++ + D R ++ G T Sbjct: 1087 DQIWRVAGKFELLDKVLPKFKATGHKVLIFFQMTQIMNIMEDFLRFRGMKYMRLDGGTKA 1146 Query: 96 KDPCTI-QEWNEGKIPLL--FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIG 152 D + + +N + G GLNLQ + ++ F W+ + Q Sbjct: 1147 DDRTDLLKSFNAPDSDYFCFLLSTRAGGLGLNLQT-ADTVIIFDTDWNPHQDLQA----- 1200 Query: 153 VTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 R + G K V + LI +N+++E++L+R K I ++ A K Sbjct: 1201 QDRAHRIGQKNEVRILRLITENSVEEMILERAHKKLEIDGKVIQAGK 1247 >gi|171686228|ref|XP_001908055.1| hypothetical protein [Podospora anserina S mat+] gi|170943075|emb|CAP68728.1| unnamed protein product [Podospora anserina S mat+] Length = 1895 Score = 95.0 bits (235), Expect = 5e-18, Method: Composition-based stats. Identities = 37/209 (17%), Positives = 74/209 (35%), Gaps = 32/209 (15%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEV 61 + Y Q+ + QG ++E A K L E + + Sbjct: 1618 RAYDDTQK--FLARQGTSLEDPAHAPKLTALRDLLVECGIGVEGQESS----------DP 1665 Query: 62 IIEKANAAPIIVAYHFNSDLARLQKAFPQG-------------RTLDKDPCTIQEWN-EG 107 + ++ L +Q +G ++ + ++N + Sbjct: 1666 LYTPIKPHRALIFCQMKEMLDMVQNTVLKGMLPSTQYLRLDGSVEANRRQDIVNKFNSDP 1725 Query: 108 KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFV 167 +L + G GLNL G + ++F W+ ++ Q ++R + G K+ V V Sbjct: 1726 SYDVLLLTTSVGGLGLNLT-GADTVIFVEHDWNPQKDLQAMDR-----AHRIGQKKVVNV 1779 Query: 168 YYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 Y LI + T++E +L R K + ++N Sbjct: 1780 YRLITRGTLEEKILSLQRFKIDVASTVVN 1808 >gi|170581274|ref|XP_001895612.1| SNF2 family N-terminal domain containing protein [Brugia malayi] gi|158597372|gb|EDP35538.1| SNF2 family N-terminal domain containing protein [Brugia malayi] Length = 1965 Score = 95.0 bits (235), Expect = 5e-18, Method: Composition-based stats. Identities = 28/155 (18%), Positives = 61/155 (39%), Gaps = 19/155 (12%) Query: 55 KIKALEVIIEKAN--AAPIIVAYHFNSDLARLQK----------AFPQGRTLDKDPCTIQ 102 K++ L ++ ++ L LQ +++ + Sbjct: 1336 KLQVLNSLLHDLFLYKHRCLIFTQMARVLDILQAFLSFHGYQYFRLDGTTGIEQRQAMTE 1395 Query: 103 EWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGF 161 +N + KI S G G+NL G + ++F+ W+ Q +R + G Sbjct: 1396 RFNADPKIFCFILSTRSGGIGVNLT-GADTVIFYDSDWNPTMDAQAQDRC-----HRIGQ 1449 Query: 162 KRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 R V +Y L+++ TI+E +L++ K + ++ ++ Sbjct: 1450 TRNVTIYRLVSERTIEENILRKAMQKRRLGEMAID 1484 >gi|156088007|ref|XP_001611410.1| SNF2 family N-terminal domain containing protein [Babesia bovis] gi|154798664|gb|EDO07842.1| SNF2 family N-terminal domain containing protein [Babesia bovis] Length = 860 Score = 95.0 bits (235), Expect = 5e-18, Method: Composition-based stats. Identities = 31/158 (19%), Positives = 58/158 (36%), Gaps = 21/158 (13%) Query: 51 VHDEKIKALEVIIEKAN--AAPIIVAYHFNSDLA-----------RLQKAFPQGRTLDKD 97 + K++ + II++ ++ F L +L+ G Sbjct: 696 LESAKVQEMFKIIDRVEQAGKKALIFSQFTMYLDLLETCLGLHKPQLEYLRLDGGHNPST 755 Query: 98 PCTI-QEW-NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTR 155 I + + N+ I LL + G GLNL + ++ L W+ Q R Sbjct: 756 RTDIVERFTNDPNITLLLISTKAGGTGLNLTV-ASTVILMDLDWNPHNDAQA-----ENR 809 Query: 156 QRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDL 193 + G V VY L+ ++TI+E + + + K + D Sbjct: 810 SHRIGQTEPVDVYKLMCEDTIEEYIWECCQRKLLLDDA 847 >gi|330940925|ref|XP_003306005.1| hypothetical protein PTT_19012 [Pyrenophora teres f. teres 0-1] gi|311316706|gb|EFQ85893.1| hypothetical protein PTT_19012 [Pyrenophora teres f. teres 0-1] Length = 1393 Score = 95.0 bits (235), Expect = 5e-18, Method: Composition-based stats. Identities = 39/225 (17%), Positives = 79/225 (35%), Gaps = 33/225 (14%) Query: 2 KQYHKF---QRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVH------ 52 K Y + R + D +G ++ ++ +L N ++E + Sbjct: 813 KLYKQLVTHNRLMVSDGKGGKTGMRGLSNMLMQLRKLCNHPFVFEEVEDVMNPTKSTNDL 872 Query: 53 ----DEKIKALEVIIE--KANAAPIIVAYH------FNSDLARLQKAF----PQGRTLDK 96 K + L+ I+ +A +++ + D RL+ D Sbjct: 873 LWRASGKFELLDRILPKFQATGHRVLMFFQMTQIMNIMEDYLRLRGMMYLRLDGATKADD 932 Query: 97 DPCTIQEWNEGKIPLL--FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 ++ +N P + G GLNLQ + ++ + W+ + Q Sbjct: 933 RSDLLRLFNAPDSPYFCFLLSTRAGGLGLNLQT-ADTVIIYDSDWNPHQDLQA-----QD 986 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 R + G K V + LI N+++E +L+R K + ++ A K Sbjct: 987 RAHRIGQKNEVRILRLITSNSVEEKILERANYKLDMDGKVIQAGK 1031 >gi|257058201|ref|YP_003136089.1| SNF2-related protein [Cyanothece sp. PCC 8802] gi|256588367|gb|ACU99253.1| SNF2-related protein [Cyanothece sp. PCC 8802] Length = 1047 Score = 95.0 bits (235), Expect = 5e-18, Method: Composition-based stats. Identities = 39/214 (18%), Positives = 70/214 (32%), Gaps = 26/214 (12%) Query: 3 QYHKFQRELYCDLQGENIEAFNSA--SKTVKCLQLANGAVYYDEEKH---WKEVHDEKIK 57 Y K +L+ + S VK Q+ N + +EK Sbjct: 814 LYQKLVDSSLEELEDKTGIQRQGLILSLLVKLKQICNHPAQFLKEKQLNFPHRSGKLMRL 873 Query: 58 ALEVIIEKANAAPIIVAYHFNSDLARLQK-----------AFPQGRTLDKDPCTI--QEW 104 + ++ F S+ +L + F G T + + + Sbjct: 874 EEMLEELIEEGDRALIFTQF-SEWGKLLQPYLMAKFSQEVLFLHGGTRREQRQVMIDRFQ 932 Query: 105 NEGKIP-LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKR 163 N P L + G GLNL N + WW+ Q +R + G KR Sbjct: 933 NAPDGPQLFILSLKAGGTGLNLTR-ANHVFHIDRWWNPAVENQATDR-----AFRIGQKR 986 Query: 164 AVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 V V+ + T+++ + + L TK + + ++A Sbjct: 987 NVQVHKFVCTGTLEDKINEMLETKKQLAEQTVDA 1020 >gi|68466749|ref|XP_722570.1| hypothetical protein CaO19.1526 [Candida albicans SC5314] gi|46444555|gb|EAL03829.1| hypothetical protein CaO19.1526 [Candida albicans SC5314] gi|74099650|gb|AAZ99066.1| Swi/Snf core member protein [Candida albicans] Length = 1690 Score = 95.0 bits (235), Expect = 5e-18, Method: Composition-based stats. Identities = 43/227 (18%), Positives = 85/227 (37%), Gaps = 35/227 (15%) Query: 2 KQYHKFQRELYCDLQGEN-----IEAFNSASKTVKCLQLANG-AVYYDEEKHW---KEVH 52 K Y + R + N+ ++ ++ ++ N VY + E E + Sbjct: 1035 KLYQQMLRYNMLYAGDPANGSVPVTIKNANNQIMQLKKICNHPFVYEEVENLINPNIETN 1094 Query: 53 DE------KIKALEVIIEK--ANAAPIIVAYH------FNSDLAR---LQKAFPQGRTLD 95 D+ K + L+ ++ K A +++ + D R ++ G T Sbjct: 1095 DQIWRVAGKFELLDKVLPKFKATGHKVLIFFQMTQIMNIMEDFLRFRGMKYMRLDGGTKA 1154 Query: 96 KDPCTI-QEWNEGKIPLL--FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIG 152 D + + +N + G GLNLQ + ++ F W+ + Q Sbjct: 1155 DDRTDLLKSFNAPDSDYFCFLLSTRAGGLGLNLQT-ADTVIIFDTDWNPHQDLQA----- 1208 Query: 153 VTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 R + G K V + LI +N+++E++L+R K I ++ A K Sbjct: 1209 QDRAHRIGQKNEVRILRLITENSVEEMILERAHKKLEIDGKVIQAGK 1255 >gi|328698504|ref|XP_001947753.2| PREDICTED: transcription termination factor 2-like [Acyrthosiphon pisum] Length = 807 Score = 95.0 bits (235), Expect = 5e-18, Method: Composition-based stats. Identities = 43/195 (22%), Positives = 67/195 (34%), Gaps = 33/195 (16%) Query: 30 VKCLQLANGAVYYDEEKHWKEVHDE----------KIKALEVIIEK-----ANAAPIIVA 74 L + DE K V+D KIK + ++ + N I+ Sbjct: 599 NDLSDLMSCLTLEDEPVKKKHVNDSNIFQKSWISTKIKKICDLVNQKVLNGGNREKAIIV 658 Query: 75 YHFNSDLARLQKA----------FPQGRTLDKDPCTIQEWN--EGKIPLLFAHPASCGHG 122 + S L + K F + K I+E+N G +L S G Sbjct: 659 SQWTSFLYLIHKHLVYYNAKMEMFSGAIPIPKRNKIIREFNDPNGGPQILLLSLKSGCVG 718 Query: 123 LNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQ 182 LNL N + W+ + Q +RI + G + V++Y I NTI+ +L Sbjct: 719 LNL-MAANHMFLVDNHWNPQLEAQACDRI-----YRIGQTKPVYIYKFICSNTIETRILN 772 Query: 183 RLRTKSTIQDLLLNA 197 + K I D L Sbjct: 773 IQKHKLKIADNLFKG 787 >gi|302824854|ref|XP_002994066.1| hypothetical protein SELMODRAFT_236903 [Selaginella moellendorffii] gi|300138072|gb|EFJ04853.1| hypothetical protein SELMODRAFT_236903 [Selaginella moellendorffii] Length = 1046 Score = 95.0 bits (235), Expect = 5e-18, Method: Composition-based stats. Identities = 32/142 (22%), Positives = 53/142 (37%), Gaps = 17/142 (11%) Query: 65 KANAAPIIVAYHFNSDLARLQ----------KAFPQGRTLDKDPCTIQEWNEGK-IPLLF 113 K ++V L ++ + ++ + P I E+NE + + Sbjct: 648 KDQGHRVLVFCQTQQMLDIVEIFVESQGYTYRRMDGSTSVKQRPALIDEFNESSHVFVFL 707 Query: 114 AHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQ 173 G G NL G N ++ F W+ Q ER + G + V VY LI + Sbjct: 708 LTTKVGGLGTNLT-GANRVIIFDPDWNPSTDMQARERAW-----RIGQTKDVIVYRLITR 761 Query: 174 NTIDELVLQRLRTKSTIQDLLL 195 TI+E V R K + + +L Sbjct: 762 GTIEEKVYHRQIYKQFLTNKIL 783 >gi|308803887|ref|XP_003079256.1| putative helicase (ISS) [Ostreococcus tauri] gi|116057711|emb|CAL53914.1| putative helicase (ISS) [Ostreococcus tauri] Length = 869 Score = 95.0 bits (235), Expect = 5e-18, Method: Composition-based stats. Identities = 23/159 (14%), Positives = 60/159 (37%), Gaps = 20/159 (12%) Query: 51 VHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQ----------KAFPQGRTLDKDP 98 + K++ L ++ + A + ++ + L L+ +++ Sbjct: 689 LESAKVQRLRELLVELKAKGSRALIFSQWKIMLDILEWVLCHVGFSYARLDGDTAVEERQ 748 Query: 99 CTIQEWNEGK--IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 + ++N + + G GLNL G + ++ ++ + +Q +R Sbjct: 749 ELVDKFNAKDSSLDTFLLSTRAGGQGLNLT-GADTVILHDCDFNPQIDRQAEDRC----- 802 Query: 157 RQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 + G ++ V VY + + T+DE ++ K + +L Sbjct: 803 HRLGQEKQVTVYRFVTEGTVDEKIVAIAEHKMNLGSTIL 841 >gi|166240364|ref|XP_638342.2| SNF2-related domain-containing protein [Dictyostelium discoideum AX4] gi|165988561|gb|EAL64859.2| SNF2-related domain-containing protein [Dictyostelium discoideum AX4] Length = 1604 Score = 95.0 bits (235), Expect = 5e-18, Method: Composition-based stats. Identities = 39/221 (17%), Positives = 82/221 (37%), Gaps = 30/221 (13%) Query: 1 MKQYHKFQRELYCDLQGENIEAFNSASKTV-------KCLQLANGAVYYDEEKHWKEV-- 51 + Y + ++ E + K + ++ N + +E E Sbjct: 875 IAMYRSLVEYGVLPIDPDSKEGRSGRLKMKGFNNIVKQLQKICNHPYLFKDEWDINEDLI 934 Query: 52 -HDEKIKALEVIIEKANAAP--IIVAYHFNSDLARLQKAF---------PQGRTL-DKDP 98 K ++ I+ K +A+ +++ + +++ F G T ++ Sbjct: 935 RTSGKFDTMDQILTKMHASKHRVLIFTQMTEVINLMEEYFSLKEWTFLRLDGSTKPEERA 994 Query: 99 CTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 + EWN P + + G G+NLQ + ++ F W+ + Q +R Sbjct: 995 HLVVEWNRPDSPFWIFVLSTHAGGLGMNLQT-ADTVIIFDSDWNPQMDLQAQDRC----- 1048 Query: 157 RQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + G +V V+ LI+ N+I+E +L R K I ++ A Sbjct: 1049 HRIGQTNSVSVFRLISANSIEEKILGRATDKLEIDAKIIQA 1089 >gi|123454531|ref|XP_001315018.1| F/Y-rich N-terminus family protein [Trichomonas vaginalis G3] gi|121897682|gb|EAY02795.1| F/Y-rich N-terminus family protein [Trichomonas vaginalis G3] Length = 1656 Score = 95.0 bits (235), Expect = 5e-18, Method: Composition-based stats. Identities = 27/153 (17%), Positives = 56/153 (36%), Gaps = 18/153 (11%) Query: 65 KANAAPIIVAYHFNSDLARLQKAF---------PQGRTLDKDPCT-IQEWNEGKIP--LL 112 KA+ +++ + L LQ G+ + I +N + Sbjct: 530 KADGHRVLIFSQMTNLLDILQDYLAATGYKFLRLDGQVKPSVRQSLIDHFNAPDSDDFIF 589 Query: 113 FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIA 172 + G G+NL + ++ F W+ + Q R + G ++ V VY LI Sbjct: 590 LLSTRAGGLGINL-NAADTVIIFDSDWNPQNDLQAQARC-----HRIGQQKTVKVYRLIT 643 Query: 173 QNTIDELVLQRLRTKSTIQDLLLNALKKETIHV 205 + T ++ + + K + +L+ KK+ + Sbjct: 644 KGTYEQNMFEISSKKLGLGHAILDKTKKKELDT 676 >gi|218245175|ref|YP_002370546.1| Non-specific serine/threonine protein kinase [Cyanothece sp. PCC 8801] gi|218165653|gb|ACK64390.1| Non-specific serine/threonine protein kinase [Cyanothece sp. PCC 8801] Length = 1047 Score = 95.0 bits (235), Expect = 5e-18, Method: Composition-based stats. Identities = 39/214 (18%), Positives = 70/214 (32%), Gaps = 26/214 (12%) Query: 3 QYHKFQRELYCDLQGENIEAFNSA--SKTVKCLQLANGAVYYDEEKH---WKEVHDEKIK 57 Y K +L+ + S VK Q+ N + +EK Sbjct: 814 LYQKLVDSSLEELEDKTGIQRQGLILSLLVKLKQICNHPAQFLKEKQLNFPHRSGKLMRL 873 Query: 58 ALEVIIEKANAAPIIVAYHFNSDLARLQK-----------AFPQGRTLDKDPCTI--QEW 104 + ++ F S+ +L + F G T + + + Sbjct: 874 EEMLEELIEEGDRALIFTQF-SEWGKLLQPYLMAKFSQEVLFLHGGTRREQRQVMIDRFQ 932 Query: 105 NEGKIP-LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKR 163 N P L + G GLNL N + WW+ Q +R + G KR Sbjct: 933 NAPDGPQLFILSLKAGGTGLNLTR-ANHVFHIDRWWNPAVENQATDR-----AFRIGQKR 986 Query: 164 AVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 V V+ + T+++ + + L TK + + ++A Sbjct: 987 NVQVHKFVCTGTLEDKINEMLETKKQLAEQTVDA 1020 >gi|242077288|ref|XP_002448580.1| hypothetical protein SORBIDRAFT_06g029476 [Sorghum bicolor] gi|241939763|gb|EES12908.1| hypothetical protein SORBIDRAFT_06g029476 [Sorghum bicolor] Length = 864 Score = 95.0 bits (235), Expect = 5e-18, Method: Composition-based stats. Identities = 25/148 (16%), Positives = 51/148 (34%), Gaps = 17/148 (11%) Query: 57 KALEVIIEKANAAPIIVAYHFNSDLARLQ----------KAFPQGRTLDKDPCTIQEWN- 105 E I A IV + L LQ + L+ + E+ Sbjct: 700 DTTESIPSMALPVKAIVFSQWTGMLDLLQLSLNRNDIQFRRLDGSMCLNLRERQVNEFKT 759 Query: 106 EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 + K+ ++ + GLN+ + ++ WW+ Q ++R + G R V Sbjct: 760 DPKVRVMLMSLKAGNLGLNMVDACH-VIMLDPWWNPYAEDQAVDR-----AHRIGQTRPV 813 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDL 193 V ++T+++ +L K + + Sbjct: 814 TVSRFTVKDTVEDRILALQEKKRKMVES 841 >gi|150866039|ref|XP_001385507.2| transcriptional regulator [Scheffersomyces stipitis CBS 6054] gi|149387295|gb|ABN67478.2| transcriptional regulator [Scheffersomyces stipitis CBS 6054] Length = 1414 Score = 95.0 bits (235), Expect = 5e-18, Method: Composition-based stats. Identities = 27/159 (16%), Positives = 62/159 (38%), Gaps = 20/159 (12%) Query: 52 HDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARL----------QKAFPQGRTLDKDPC 99 K+ LE ++ + +++ L L + G + Sbjct: 660 SSGKMVLLEQLLTRLKKEGHRVLIFSQMVRILDILGDYLSIKGYQFQRLDGGIPSAQRRI 719 Query: 100 TIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 +I +N + + + G G+NL + ++ F W+ + Q + R Sbjct: 720 SIDHFNAPESKDFIFLLSTRAGGLGINLMT-ADTVIIFDSDWNPQADLQAMAR-----AH 773 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + G K V VY ++++T++E +L+R R K ++ +++ Sbjct: 774 RIGQKNHVSVYRFVSKDTVEEQILERARKKMILEYAIIS 812 >gi|85083489|ref|XP_957128.1| SNF2-family ATP dependent chromatin remodeling factor snf21 [Neurospora crassa OR74A] gi|28918214|gb|EAA27892.1| SNF2-family ATP dependent chromatin remodeling factor snf21 [Neurospora crassa OR74A] Length = 1455 Score = 95.0 bits (235), Expect = 5e-18, Method: Composition-based stats. Identities = 38/225 (16%), Positives = 86/225 (38%), Gaps = 33/225 (14%) Query: 2 KQYHKF---QRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKA 58 + Y + Q+ L D +G A ++ ++ +L N +DE ++ + Sbjct: 766 RLYKQMVTHQKILVSDGKGGKTGARGLSNMIMQLRKLCNHPFVFDEVENQMNPTNTSNDL 825 Query: 59 LE------VIIEK------ANAAPIIVAYHFNSDLAR---------LQKAFPQGRTLDKD 97 L ++++ A +++ + + + +Q G T +D Sbjct: 826 LWRTAGKFELLDRVLPKYKATGHRVLMFFQMTAIMDIMEDFLRFRGIQYLRLDGTTKAED 885 Query: 98 -PCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 ++ +N P + + G GLNLQ + ++ + W+ + Q Sbjct: 886 RSELLRLFNAPDSPYFMFLLSTRAGGLGLNLQT-ADTVIIYDSDWNPHQDLQA-----QD 939 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 R + G K V + LI+ +++E +L+R R K + ++ A + Sbjct: 940 RAHRIGQKNEVRILRLISSASVEEKILERARFKLDMDGKVIQAGR 984 >gi|189206215|ref|XP_001939442.1| ISWI chromatin-remodeling complex ATPase ISW2 [Pyrenophora tritici-repentis Pt-1C-BFP] gi|187975535|gb|EDU42161.1| ISWI chromatin-remodeling complex ATPase ISW2 [Pyrenophora tritici-repentis Pt-1C-BFP] Length = 1271 Score = 95.0 bits (235), Expect = 5e-18, Method: Composition-based stats. Identities = 29/169 (17%), Positives = 62/169 (36%), Gaps = 26/169 (15%) Query: 52 HDEKIKALEVIIEK---ANAAPIIVAYHFNSDL--------------ARLQKAFPQGRT- 93 K LE +++ A +++ F L R + G T Sbjct: 655 ASGKFILLEKLLKHTVFAQGKKVLIFSSFTRTLDHCEDLLSLISNHGERFKSLRLDGSTS 714 Query: 94 LDKDPCTIQEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERI 151 + I+ +N+ ++ + G G+NL + ++F W+ + Q R Sbjct: 715 RARRNLDIRLFNQKGSDYKVMLLSTRAGGLGINLTSAED-VIFLDEDWNPQITLQAEAR- 772 Query: 152 GVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKK 200 + G + V +Y L Q T++E ++ R+R K + + +++ Sbjct: 773 ----AHRIGQTKKVTIYKLCTQGTVEEQMMGRIRKKLYLSAKITESMQS 817 >gi|328862983|gb|EGG12083.1| hypothetical protein MELLADRAFT_32790 [Melampsora larici-populina 98AG31] Length = 830 Score = 95.0 bits (235), Expect = 5e-18, Method: Composition-based stats. Identities = 26/143 (18%), Positives = 58/143 (40%), Gaps = 21/143 (14%) Query: 68 AAPIIVAYHFNSDLARL------QKAFPQGRTLDKDPCT-----IQEWNE----GKIPLL 112 +++ F S L + K + R ++++N+ L Sbjct: 608 GHKVLIFSQFTSMLDIIHDWANDLKGWKVCRIDGSTSQDERRAQMKDFNQNHGPDGCSLF 667 Query: 113 FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIA 172 + G G+NL + ++ F W+ ++ Q +R+ + G + V V+ L++ Sbjct: 668 LLSTRAGGVGINL-VAADTVILFDSDWNPQQDLQAQDRV-----HRIGQTKPVLVFRLVS 721 Query: 173 QNTIDELVLQRLRTKSTIQDLLL 195 NTI+ +LQ+ K ++ L++ Sbjct: 722 GNTIETKMLQKASQKRKLETLVI 744 >gi|302916069|ref|XP_003051845.1| hypothetical protein NECHADRAFT_106058 [Nectria haematococca mpVI 77-13-4] gi|256732784|gb|EEU46132.1| hypothetical protein NECHADRAFT_106058 [Nectria haematococca mpVI 77-13-4] Length = 1919 Score = 95.0 bits (235), Expect = 5e-18, Method: Composition-based stats. Identities = 37/156 (23%), Positives = 68/156 (43%), Gaps = 18/156 (11%) Query: 53 DEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQKAFP-QGRTLDK---------DPCT 100 K + L VI+++A ++V L L+ Q RT+ + Sbjct: 1280 SRKTELLTVILDEARKVGDKVLVFSQSLDSLNYLEAMCKMQLRTISRLDGSTAVESRQEE 1339 Query: 101 IQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 I+ +NEG + + G GLN+ +G N +V F + W+ QQ G+ R + G Sbjct: 1340 IKRFNEGSKEVYLISTTAGGVGLNI-HGANRVVIFDIKWNPTVEQQ-----GIGRAYRLG 1393 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 K+ VFVY+L T ++++ + K + +++ Sbjct: 1394 QKKPVFVYWLTTAGTFEQIIHNQHVFKQQLAARVVD 1429 >gi|46128445|ref|XP_388776.1| hypothetical protein FG08600.1 [Gibberella zeae PH-1] Length = 2462 Score = 95.0 bits (235), Expect = 5e-18, Method: Composition-based stats. Identities = 31/175 (17%), Positives = 68/175 (38%), Gaps = 19/175 (10%) Query: 44 EEKHWKEVHDEKIKALEVII-EKANAAPIIVAYHFNSDLARLQKAFPQGRTL-------- 94 + + + KI+ L I+ + IV F S L ++ F + R Sbjct: 2235 DPNSPQVLASSKIRELIKILQNEVKEHKFIVFSQFTSMLNLVEPFFRKERFRFVRYDGSM 2294 Query: 95 --DKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERI 151 D+ +++ + + +L GLNL +++ +W+ +Q I+R+ Sbjct: 2295 KNDEREESLRSLRSDPETRILLCSLKCGSLGLNLTAATRVVIL-EPFWNPFVEEQAIDRV 2353 Query: 152 GVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN-ALKKETIHV 205 + V +Y L NT++E +L+ K + + + ++KE + + Sbjct: 2354 -----HRLTQTVDVIIYKLTVSNTVEERILELQDKKRELAEQAIEGGMRKEALKL 2403 >gi|259146092|emb|CAY79352.1| Chd1p [Saccharomyces cerevisiae EC1118] gi|323348857|gb|EGA83095.1| Chd1p [Saccharomyces cerevisiae Lalvin QA23] Length = 1468 Score = 95.0 bits (235), Expect = 5e-18, Method: Composition-based stats. Identities = 28/159 (17%), Positives = 62/159 (38%), Gaps = 20/159 (12%) Query: 52 HDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARL----------QKAFPQGRTLDKDPC 99 K+ L+ ++ + + +++ L L + + Sbjct: 693 SSGKMVLLDQLLTRLKKDGHRVLIFSQMVRMLDILGDYLSIKGINFQRLDGTVPSAQRRI 752 Query: 100 TIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 +I +N + + G G+NL + +V F W+ + Q + R Sbjct: 753 SIDHFNSPDSNDFVFLLSTRAGGLGINLMT-ADTVVIFDSDWNPQADLQAMAR-----AH 806 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + G K V VY L++++T++E VL+R R K ++ +++ Sbjct: 807 RIGQKNHVMVYRLVSKDTVEEEVLERARKKMILEYAIIS 845 >gi|256271313|gb|EEU06383.1| Chd1p [Saccharomyces cerevisiae JAY291] Length = 1468 Score = 95.0 bits (235), Expect = 5e-18, Method: Composition-based stats. Identities = 28/159 (17%), Positives = 62/159 (38%), Gaps = 20/159 (12%) Query: 52 HDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARL----------QKAFPQGRTLDKDPC 99 K+ L+ ++ + + +++ L L + + Sbjct: 693 SSGKMVLLDQLLTRLKKDGHRVLIFSQMVRMLDILGDYLSIKGINFQRLDGTVPSAQRRI 752 Query: 100 TIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 +I +N + + G G+NL + +V F W+ + Q + R Sbjct: 753 SIDHFNSPDSNDFVFLLSTRAGGLGINLMT-ADTVVIFDSDWNPQADLQAMAR-----AH 806 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + G K V VY L++++T++E VL+R R K ++ +++ Sbjct: 807 RIGQKNHVMVYRLVSKDTVEEEVLERARKKMILEYAIIS 845 >gi|6321012|ref|NP_011091.1| Chd1p [Saccharomyces cerevisiae S288c] gi|418395|sp|P32657|CHD1_YEAST RecName: Full=Chromo domain-containing protein 1; AltName: Full=ATP-dependent helicase CHD1 gi|603404|gb|AAB64691.1| Chd1p: transcriptional regulator [Saccharomyces cerevisiae] gi|285811798|tpg|DAA07826.1| TPA: Chd1p [Saccharomyces cerevisiae S288c] Length = 1468 Score = 95.0 bits (235), Expect = 5e-18, Method: Composition-based stats. Identities = 28/159 (17%), Positives = 62/159 (38%), Gaps = 20/159 (12%) Query: 52 HDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARL----------QKAFPQGRTLDKDPC 99 K+ L+ ++ + + +++ L L + + Sbjct: 693 SSGKMVLLDQLLTRLKKDGHRVLIFSQMVRMLDILGDYLSIKGINFQRLDGTVPSAQRRI 752 Query: 100 TIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 +I +N + + G G+NL + +V F W+ + Q + R Sbjct: 753 SIDHFNSPDSNDFVFLLSTRAGGLGINLMT-ADTVVIFDSDWNPQADLQAMAR-----AH 806 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + G K V VY L++++T++E VL+R R K ++ +++ Sbjct: 807 RIGQKNHVMVYRLVSKDTVEEEVLERARKKMILEYAIIS 845 >gi|321471114|gb|EFX82087.1| hypothetical protein DAPPUDRAFT_101480 [Daphnia pulex] Length = 821 Score = 95.0 bits (235), Expect = 5e-18, Method: Composition-based stats. Identities = 43/228 (18%), Positives = 84/228 (36%), Gaps = 47/228 (20%) Query: 3 QYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVI 62 +Y +++ DL+ + E+ N AS ++ +L D+E + E H KI L I Sbjct: 509 EYQAMKKQS--DLEDDLEESANPASSSLWWSKL-----IPDDEINNIE-HSGKILLLMEI 560 Query: 63 IEKAN--AAPIIVAYHFNSDLARLQKAF---------------------------PQGRT 93 + ++V + L +++ G T Sbjct: 561 LRHCEVIGDKLLVFSQSLTSLDLIEEFLAAEHLKSSAGNASAVSGTWILDTDYFRLDGST 620 Query: 94 LDKDPCTI-QEWNEGK---IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIE 149 + +N+ K + L + G G+NL G N ++ F W+ +Q + Sbjct: 621 KSAERLKFCTAFNDPKNVRVRLFLISTKAGGIGINLT-GANRVIIFDSSWNPSFDEQSVF 679 Query: 150 RIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 R+ + G + F+Y +AQ T++E V R K + +++ Sbjct: 680 RV-----YRLGQTKPCFIYRFVAQGTMEEKVYYRQVEKLALSRRIVDG 722 >gi|226288690|gb|EEH44202.1| TATA-binding protein-associated factor MOT1 [Paracoccidioides brasiliensis Pb18] Length = 1912 Score = 95.0 bits (235), Expect = 5e-18, Method: Composition-based stats. Identities = 37/209 (17%), Positives = 73/209 (34%), Gaps = 30/209 (14%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEV 61 K+Y++ Q+ + + +I A K L D + ++ Sbjct: 1634 KRYNEIQK--LLEAKNSHIRDVAHAPKLSALRDL-----LVDCGIGVDPSTEGELDTGAN 1686 Query: 62 IIEKANAAPIIVAYHFNSDLARLQK-------------AFPQGRTLDKDPCTIQEWN-EG 107 + +V L +Q K + ++N + Sbjct: 1687 YVSP---HRALVFCQMKEMLDIVQNDVFKKLLPSVQYLRLDGSVEAAKRQNIVNQFNTDP 1743 Query: 108 KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFV 167 +L + G GLNL G + ++F W+ ++ Q ++R + G K+ V V Sbjct: 1744 SYDVLLLTTSVGGLGLNLT-GADTVIFVEHDWNPQKDIQAMDR-----AHRIGQKKVVNV 1797 Query: 168 YYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 Y LI + T++E +L R K + ++N Sbjct: 1798 YRLITRGTLEEKILNLQRFKIDVASTVVN 1826 >gi|225681546|gb|EEH19830.1| modifier of transcription [Paracoccidioides brasiliensis Pb03] Length = 1912 Score = 95.0 bits (235), Expect = 5e-18, Method: Composition-based stats. Identities = 37/209 (17%), Positives = 73/209 (34%), Gaps = 30/209 (14%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEV 61 K+Y++ Q+ + + +I A K L D + ++ Sbjct: 1634 KRYNEIQK--LLEAKNSHIRDVAHAPKLSALRDL-----LVDCGIGVDPSTEGELDTGAN 1686 Query: 62 IIEKANAAPIIVAYHFNSDLARLQK-------------AFPQGRTLDKDPCTIQEWN-EG 107 + +V L +Q K + ++N + Sbjct: 1687 YVSP---HRALVFCQMKEMLDIVQNDVFKRLLPSVQYLRLDGSVEAAKRQNIVNQFNTDP 1743 Query: 108 KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFV 167 +L + G GLNL G + ++F W+ ++ Q ++R + G K+ V V Sbjct: 1744 SYDVLLLTTSVGGLGLNLT-GADTVIFVEHDWNPQKDIQAMDR-----AHRIGQKKVVNV 1797 Query: 168 YYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 Y LI + T++E +L R K + ++N Sbjct: 1798 YRLITRGTLEEKILNLQRFKIDVASTVVN 1826 >gi|151944881|gb|EDN63140.1| RNA polymerase II elongation factor [Saccharomyces cerevisiae YJM789] Length = 1468 Score = 95.0 bits (235), Expect = 5e-18, Method: Composition-based stats. Identities = 28/159 (17%), Positives = 62/159 (38%), Gaps = 20/159 (12%) Query: 52 HDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARL----------QKAFPQGRTLDKDPC 99 K+ L+ ++ + + +++ L L + + Sbjct: 693 SSGKMVLLDQLLTRLKKDGHRVLIFSQMVRMLDILGDYLSIKGINFQRLDGTVPSAQRRI 752 Query: 100 TIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 +I +N + + G G+NL + +V F W+ + Q + R Sbjct: 753 SIDHFNSPDSNDFVFLLSTRAGGLGINLMT-ADTVVIFDSDWNPQADLQAMAR-----AH 806 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + G K V VY L++++T++E VL+R R K ++ +++ Sbjct: 807 RIGQKNHVMVYRLVSKDTVEEEVLERARKKMILEYAIIS 845 >gi|330932428|ref|XP_003303771.1| hypothetical protein PTT_16121 [Pyrenophora teres f. teres 0-1] gi|311319996|gb|EFQ88126.1| hypothetical protein PTT_16121 [Pyrenophora teres f. teres 0-1] Length = 1250 Score = 95.0 bits (235), Expect = 5e-18, Method: Composition-based stats. Identities = 32/163 (19%), Positives = 59/163 (36%), Gaps = 20/163 (12%) Query: 53 DEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAFPQ------------GRTLDKDP 98 K++ ++ ++ K ++ L LQK Q D+ Sbjct: 757 SGKMQVVKELLSLWKKGGHKTLLFAQHRIMLDILQKFVSQLPDINWRRMDGETPIKDRQN 816 Query: 99 CTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQ 158 + N + + G G+NL G N ++ + W+ Q ER + Sbjct: 817 LVDEFNNSPDLHVFLLTTKVGGLGVNLT-GANRVIIYDPDWNPSTDIQARERSW-----R 870 Query: 159 AGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 G KR V +Y L++ TI+E + R K + + +L K+ Sbjct: 871 LGQKREVEIYRLMSAGTIEEKIYHRQIFKQFLTNKVLKDPKQR 913 >gi|312071855|ref|XP_003138800.1| hypothetical protein LOAG_03215 [Loa loa] gi|307766034|gb|EFO25268.1| hypothetical protein LOAG_03215 [Loa loa] Length = 1112 Score = 95.0 bits (235), Expect = 5e-18, Method: Composition-based stats. Identities = 32/156 (20%), Positives = 62/156 (39%), Gaps = 19/156 (12%) Query: 53 DEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQK----------AFPQGRTLDKDPCT 100 K++ L+ +++ K +++ L L+K + Sbjct: 582 SGKMQVLKALLKLWKQQDQKVLLFSQSRQMLTILEKFVIQEGYEYLRMDGTTPVRSRQLL 641 Query: 101 IQEWNE-GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQA 159 ++++N+ +I + G G+NL G N +V F W+ Q ER + Sbjct: 642 VEKFNKVDEIFIFLLTTRVGGLGINLT-GANRVVIFDPDWNPSTDIQARERAW-----RI 695 Query: 160 GFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 G +RAV +Y L+ TI+E + R K + + +L Sbjct: 696 GQERAVTIYRLLTGGTIEEKIYHRQIFKVFLSNRIL 731 >gi|320169070|gb|EFW45969.1| TBP-associated factor 172 [Capsaspora owczarzaki ATCC 30864] Length = 2065 Score = 95.0 bits (235), Expect = 5e-18, Method: Composition-based stats. Identities = 31/141 (21%), Positives = 54/141 (38%), Gaps = 20/141 (14%) Query: 69 APIIVAYHFNSDLARLQK-----AFPQGRTLDKDP--------CTIQEWNE-GKIPLLFA 114 +V L + K P L D + ++NE I LL Sbjct: 1833 HRALVFCQTKGMLDLITKQLLDAHMPTVSYLRLDGSIPPLERFAIVTKFNEDPSIDLLLL 1892 Query: 115 HPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQN 174 G GLNL G + ++F W+ Q ++R + G ++ V VY LI + Sbjct: 1893 TTHVGGLGLNLT-GADTVIFIDHDWNPSRDLQAMDR-----AHRIGQRKVVNVYRLITRG 1946 Query: 175 TIDELVLQRLRTKSTIQDLLL 195 T++E ++ + K I + ++ Sbjct: 1947 TLEEKIMSLQQFKLNIANTVI 1967 >gi|325190695|emb|CCA25191.1| DNA repair and recombination protein RAD54 putative [Albugo laibachii Nc14] Length = 910 Score = 95.0 bits (235), Expect = 6e-18, Method: Composition-based stats. Identities = 32/151 (21%), Positives = 61/151 (40%), Gaps = 18/151 (11%) Query: 56 IKALEVIIEKANAAPIIVAYHFNSDLARL-----QKAFPQGRT-----LDKDPCTIQEWN 105 + L ++ K I+V ++ L + ++ +P R K + +N Sbjct: 537 LDHLMQMMRKETKERIVVVSNYTQTLDLVSLLCSERNWPFVRLDGTISPKKRQQMVDVFN 596 Query: 106 EGKI--PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKR 163 + + G GLNL G N LV F W+ +Q R+ + G K+ Sbjct: 597 DPTTHSFAFLLSSKAGGCGLNL-IGANRLVLFDPDWNPATDKQAAARVW-----REGQKQ 650 Query: 164 AVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 +VY +A +++E + QR +K +Q ++ Sbjct: 651 MCYVYRFLATGSLEEKIFQRQLSKEGLQSIV 681 >gi|242072472|ref|XP_002446172.1| hypothetical protein SORBIDRAFT_06g003030 [Sorghum bicolor] gi|241937355|gb|EES10500.1| hypothetical protein SORBIDRAFT_06g003030 [Sorghum bicolor] Length = 1174 Score = 95.0 bits (235), Expect = 6e-18, Method: Composition-based stats. Identities = 37/160 (23%), Positives = 60/160 (37%), Gaps = 21/160 (13%) Query: 42 YDEEKHWKEVHDEKIKALEVIIEKANAAPI--IVAYHFNSDLARLQKAFPQGRTL----- 94 D + +WK K+ L ++++ IV F S L+ F Q Sbjct: 998 VDAKNNWK--DSCKVSKLIMMLQSLQKKKEKSIVFSQFTSFFDLLEIPFNQKGIKFLRFD 1055 Query: 95 -----DKDPCTIQEWNE-GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMI 148 ++E++E +L + G GLNL N + WW+ +Q I Sbjct: 1056 GKLSQKHKEKILKEFSETQDKLVLMMSLKTGGVGLNLTAASN-VFLMDPWWNPAVEEQAI 1114 Query: 149 ERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKS 188 RI + G KR V V I ++T++E + Q K Sbjct: 1115 MRI-----HRIGQKREVRVKRFIVKDTVEERLQQVQMRKQ 1149 >gi|116193103|ref|XP_001222364.1| hypothetical protein CHGG_06269 [Chaetomium globosum CBS 148.51] gi|88182182|gb|EAQ89650.1| hypothetical protein CHGG_06269 [Chaetomium globosum CBS 148.51] Length = 1203 Score = 95.0 bits (235), Expect = 6e-18, Method: Composition-based stats. Identities = 24/176 (13%), Positives = 60/176 (34%), Gaps = 20/176 (11%) Query: 41 YYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQ------------KAF 88 Y + I L+ I E I+ + + L ++ + Sbjct: 1018 YLRDNWEDSAKVTRVIDLLKEIQE--TGEKTIIFSQWTTLLDMIECQIKDKLNLRYCRYT 1075 Query: 89 PQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMI 148 + +D + ++ + GLNL I++ +W+ Q + Sbjct: 1076 GKMSRNQRDEAVQDFIENPRNTVMLVSLRAGNAGLNLTVASRIII-CDPFWNPFIEAQAV 1134 Query: 149 ERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIH 204 +R + G +R V V+ ++ + T+++ +L K + + L+ + + + Sbjct: 1135 DR-----AHRIGQQREVKVHRILVKETVEDRILALQNNKRKLVEAALDEGQSKNVG 1185 >gi|324500193|gb|ADY40099.1| Helicase mot1 [Ascaris suum] Length = 1698 Score = 95.0 bits (235), Expect = 6e-18, Method: Composition-based stats. Identities = 30/150 (20%), Positives = 62/150 (41%), Gaps = 21/150 (14%) Query: 63 IEKANAAPIIVAYHFNSDLARLQKAFPQGR---------------TLDKDPCTIQEWNEG 107 + NA ++ S + + + F G+ ++ N+ Sbjct: 1443 VSALNAHRALIFCQRISTVQVIAEFFNSGQLGLDIRYSVLDGTVPVSERHAIAENFNNDP 1502 Query: 108 KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFV 167 I +L + G GLNL G ++++F W+ + Q ++R + G KR V V Sbjct: 1503 GIDVLLLTTSVGGEGLNLT-GADVVIFVEHDWNPVKDLQAMDR-----AHRIGQKRTVNV 1556 Query: 168 YYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 Y LI + +I++ +++ + K+ + L+ A Sbjct: 1557 YRLITEASIEQKIMRYQKFKTDTANALVGA 1586 >gi|302841324|ref|XP_002952207.1| hypothetical protein VOLCADRAFT_81789 [Volvox carteri f. nagariensis] gi|300262472|gb|EFJ46678.1| hypothetical protein VOLCADRAFT_81789 [Volvox carteri f. nagariensis] Length = 755 Score = 95.0 bits (235), Expect = 6e-18, Method: Composition-based stats. Identities = 20/155 (12%), Positives = 59/155 (38%), Gaps = 20/155 (12%) Query: 55 KIKALEVIIEKA--NAAPIIVAYHFNSDLARLQK----------AFPQGRTLDKDPCTIQ 102 K+ L+ ++++ +++ L ++ + I Sbjct: 485 KLALLDRLLKELRKGGHRVLIFSQMTEMLNVIEAYLQDLGIQPLRIDGSVHWQQRRNDIA 544 Query: 103 EWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 E+ G + + G G+NL + ++ + W+ + Q ++R + G Sbjct: 545 EFQSGNSDKWVFLLSTRAGGLGINLT-AADTVIIYDSDWNPHQDAQAMDRC-----HRIG 598 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 + V V+ L+ N+++ +L + +K ++ +++ Sbjct: 599 QTKPVLVFRLVTSNSVENRMLAKAESKKALERIVI 633 >gi|310791236|gb|EFQ26765.1| SNF2 family domain-containing protein [Glomerella graminicola M1.001] Length = 1012 Score = 95.0 bits (235), Expect = 6e-18, Method: Composition-based stats. Identities = 24/161 (14%), Positives = 57/161 (35%), Gaps = 21/161 (13%) Query: 51 VHDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAFPQ-------------GRTLD 95 + K +A ++ + I+ + L LQ A + Sbjct: 837 LASSKTRACMDLLRKIQETGEKTIIFSQWTMLLDLLQVAIKKEGLGIKHCRYTGEMSMAQ 896 Query: 96 KDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTR 155 +D + + ++ + GLNL + ++ +W+ Q ++R Sbjct: 897 RDDTAFTFSTDADMKVMMVSLRAGNAGLNL-VSASRVIIMDPFWNPYIEMQAVDR----- 950 Query: 156 QRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + G ++ V V+ ++ Q T+++ ++Q K D L+ Sbjct: 951 AHRIGQQKPVKVHRILTQETVEDRIVQLQEKKRATVDAALD 991 >gi|255731139|ref|XP_002550494.1| chromo domain protein 1 [Candida tropicalis MYA-3404] gi|240132451|gb|EER32009.1| chromo domain protein 1 [Candida tropicalis MYA-3404] Length = 1423 Score = 95.0 bits (235), Expect = 6e-18, Method: Composition-based stats. Identities = 28/159 (17%), Positives = 61/159 (38%), Gaps = 20/159 (12%) Query: 52 HDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARL-QKAFPQGRTLDK---------DPC 99 K+ LE ++ + +++ L L F +G + Sbjct: 669 SSGKMVLLEQLLTRLKKEGHRVLIFSQMVRMLDILGDYMFIKGYQFQRLDGTIPSSQRKI 728 Query: 100 TIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 +I +N + G G+NL + ++ F W+ + Q + R Sbjct: 729 SIDHFNAPDSKDFAFLLSTRAGGLGINLMT-ADTVIIFDSDWNPQADLQAMAR-----AH 782 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + G K V VY ++++T++E +L+R R K ++ +++ Sbjct: 783 RIGQKNHVSVYRFVSKDTVEEQILERARKKMVLEYAIIS 821 >gi|21223436|ref|NP_629215.1| bifunctional protein [Streptomyces coelicolor A3(2)] gi|13810424|emb|CAC37452.1| putative bifunctional protein [Streptomyces coelicolor A3(2)] Length = 800 Score = 95.0 bits (235), Expect = 6e-18, Method: Composition-based stats. Identities = 37/197 (18%), Positives = 75/197 (38%), Gaps = 30/197 (15%) Query: 14 DLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKA--NAAPI 71 +L + EA+ A + + + A + K++ L I+++A N Sbjct: 547 ELSASDEEAYREAVRAGNFMAMRRAAYMS-------SGNSAKLERLREIVQEAGENGQKT 599 Query: 72 IVAYHFNSDLARLQKAFP--------------QGRTLDKDPCTIQEWNEGKIP-LLFAHP 116 +V +F LA +++A G + + ++ + P +L Sbjct: 600 VVFSNFKDVLAVVKEALAVETTRVTPVFGPLTGGVPAQRRQEIVDDFAGVQGPAVLLGQI 659 Query: 117 ASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTI 176 + G GLN+Q +++V Q + R + G R V V+ L+A + Sbjct: 660 QAAGVGLNMQ-AASVVVICEPQIKPTIEHQAVAR-----AHRMGQVRPVRVHRLLATGGV 713 Query: 177 DELVLQRLRTKSTIQDL 193 DE +++ L K+ + D Sbjct: 714 DERMVKMLEAKTRLFDA 730 >gi|115644354|ref|XP_001201170.1| PREDICTED: similar to E1a binding protein P400 [Strongylocentrotus purpuratus] gi|115956564|ref|XP_001178919.1| PREDICTED: similar to E1a binding protein P400 [Strongylocentrotus purpuratus] Length = 3330 Score = 95.0 bits (235), Expect = 6e-18, Method: Composition-based stats. Identities = 30/156 (19%), Positives = 66/156 (42%), Gaps = 19/156 (12%) Query: 55 KIKALEVIIEKA--NAAPIIVAYHFNSDLARLQKAF---------PQGRTLDKDPC-TIQ 102 K++ ++ ++ K + +++ L L++ G T + ++ Sbjct: 1996 KLQTMDGLLRKLKTEGSRVLIFTQMTKMLDILERFLNFHGHIYLRLDGTTKVEQRQIMME 2055 Query: 103 EWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGF 161 +N + +I S G G+NL G N ++F+ W+ Q +R + G Sbjct: 2056 RFNKDPRIFCFILSTRSGGMGVNLT-GANAVIFYDSDWNPTMDAQAQDRC-----HRIGQ 2109 Query: 162 KRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 R V +Y LI++ +I+E +L++ K + D+ + Sbjct: 2110 TRDVHIYRLISEMSIEENILKKSNQKRLLIDVSIEG 2145 >gi|84998372|ref|XP_953907.1| SNF2-family protein (chromodomain-helicase-DNA-binding protein 1 ) [Theileria annulata] gi|65304905|emb|CAI73230.1| SNF2-family protein (chromodomain-helicase-DNA-binding protein 1 homologue), putative [Theileria annulata] Length = 1816 Score = 95.0 bits (235), Expect = 6e-18, Method: Composition-based stats. Identities = 35/224 (15%), Positives = 82/224 (36%), Gaps = 39/224 (17%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQL---ANGA--VYYDEEKH-WKEV---H 52 + Y + R + +S C++L N Y E++ W + Sbjct: 1064 RNYEELARN----------SGGSRSSLQNICMELKKVCNHPFLCYEPEDRQVWLQGLIYG 1113 Query: 53 DEKIKALEVIIEKAN--AAPIIVAYHFNSDLARL-----QKAFPQGRT-----LDKDPCT 100 KI L+ ++++ +++ L + + F R + Sbjct: 1114 SGKICLLDKLLQRLKEKGHRVLIFSQMVRMLNIISEYLTLRGFKHQRLDGTMGKEVRKKA 1173 Query: 101 IQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQ 158 + +N+ + + G G+NL + ++ + W+ + Q R + Sbjct: 1174 MDHFNDPQSDDFCFLLSTKAGGLGINLT-SADTVIIYDSDWNPQNDLQAEAR-----AHR 1227 Query: 159 AGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKET 202 G + V +Y L+ +++I++ +L+R +TK + L++ L K Sbjct: 1228 IGQTKTVQIYRLVTKDSIEQTILERAKTKMVLDALVVQGLNKRG 1271 >gi|290994049|ref|XP_002679645.1| predicted protein [Naegleria gruberi] gi|284093262|gb|EFC46901.1| predicted protein [Naegleria gruberi] Length = 1001 Score = 95.0 bits (235), Expect = 6e-18, Method: Composition-based stats. Identities = 23/140 (16%), Positives = 54/140 (38%), Gaps = 16/140 (11%) Query: 67 NAAPIIVAYHFNSDLARLQKAF---------PQGRTLDKDP-CTIQEWNEGKIPLLFAHP 116 +++ L LQ F G ++ I+ + + + + Sbjct: 477 EGHKVLIFSQMTQMLDILQDYFSFRKWNYERLDGSVRGEERFEAIKSFTDKDVFVFLLST 536 Query: 117 ASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTI 176 + G GLNL + ++F + + + Q R + G + V VY L+ ++++ Sbjct: 537 RAGGVGLNLT-SADTVIFMDMDMNPQMDLQAQARC-----HRIGQDKPVTVYRLVTESSV 590 Query: 177 DELVLQRLRTKSTIQDLLLN 196 +E++L+R K + ++ Sbjct: 591 EEVILKRSMKKIALSINTID 610 >gi|241950892|ref|XP_002418168.1| ATP-dependent helicase, putative; SWI/SNF chromatin remodelling complex protein, putative; SWI/SNF complex component, putative; transcription regulatory protein, putative [Candida dubliniensis CD36] gi|223641507|emb|CAX43468.1| ATP-dependent helicase, putative [Candida dubliniensis CD36] Length = 1663 Score = 95.0 bits (235), Expect = 6e-18, Method: Composition-based stats. Identities = 43/227 (18%), Positives = 84/227 (37%), Gaps = 35/227 (15%) Query: 2 KQYHKFQRELYC---DLQGENI--EAFNSASKTVKCLQLANG-AVYYDEEKHWKEVHDE- 54 K Y + R D ++ N+ ++ ++ ++ N VY + E D Sbjct: 1008 KLYQQMLRYNMLYAGDPSNGSVPVTIKNANNQIMQLKKICNHPFVYEEVEHLINPTIDTN 1067 Query: 55 --------KIKALEVIIEK--ANAAPIIVAYH------FNSDLAR---LQKAFPQGRTLD 95 K + L+ ++ K A +++ + D R ++ G T Sbjct: 1068 DQIWRVAGKFELLDKVLPKFKATGHKVLIFFQMTQIMNIMEDFLRFRDMKYMRLDGGTKA 1127 Query: 96 KDPCTI-QEWNEGKIPLL--FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIG 152 D + + +N + G GLNLQ + ++ F W+ + Q Sbjct: 1128 DDRTDLLKSFNAPDSDYFCFLLSTRAGGLGLNLQT-ADTVIIFDTDWNPHQDLQA----- 1181 Query: 153 VTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 R + G K V + LI +N+++E++L+R K I ++ A K Sbjct: 1182 QDRAHRIGQKNEVRILRLITENSVEEMILERAHKKLEIDGKVIQAGK 1228 >gi|218148594|ref|YP_002364362.1| hypothetical protein PP141_gp54 [Pseudomonas phage 14-1] gi|218059790|emb|CAU13906.1| hypothetical protein [Pseudomonas phage 14-1] Length = 519 Score = 95.0 bits (235), Expect = 6e-18, Method: Composition-based stats. Identities = 39/215 (18%), Positives = 87/215 (40%), Gaps = 24/215 (11%) Query: 2 KQYHKFQRELYCDLQGEN---IEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDE---- 54 K Y + + + + LQ E+ +F++A+ K Q+A+G + E D Sbjct: 300 KVYQRVEEDYHFVLQNEDFMLDVSFDAAAARSKLKQVASGYINVYGEPVILPPEDNPRFA 359 Query: 55 -KIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFP---------QGRTLD-KDPCTIQE 103 LE ++E+ II+ ++ +++ G T + + I + Sbjct: 360 VFTDLLEGLLEEDQERSIIIWAMRIQEIDQIKAYLEAQGISFGTYYGETKEAEREKLIDD 419 Query: 104 WNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKR 163 + ++ + +PA+ G G+ L ++ ++++ D E Q R + G Sbjct: 420 FQAKRVQVFLGNPAAAGIGITLT-AADVAIYYTTDEDNELRMQ-----SEDRNHRIGTVN 473 Query: 164 AVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNAL 198 +V + LI ++IDE + L K + +++ + Sbjct: 474 SVLYFDLICLDSIDEKIQVSLEWKRNLASYVVDGV 508 >gi|169606908|ref|XP_001796874.1| hypothetical protein SNOG_06505 [Phaeosphaeria nodorum SN15] gi|160707107|gb|EAT86336.2| hypothetical protein SNOG_06505 [Phaeosphaeria nodorum SN15] Length = 1108 Score = 95.0 bits (235), Expect = 6e-18, Method: Composition-based stats. Identities = 41/231 (17%), Positives = 87/231 (37%), Gaps = 43/231 (18%) Query: 6 KFQRELYCDLQGENIEAFNSAS--------KTVKCLQLAN-------------GAVYYDE 44 Q + Y + ++I+A N + +QL G Y + Sbjct: 430 DMQVDWYKKILEKDIDAVNGGAGNKESKTRLLNIVMQLRKCCNHPYLFEGAEPGPPYTTD 489 Query: 45 EKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARL---------QKAFPQGRT 93 E + K+ L+ ++++ A + +++ + L + Q G T Sbjct: 490 EHLVN--NAAKMVMLDRLLKRMKAQGSRVLIFSQMSRVLDIMEDYSVMRGYQYCRIDGST 547 Query: 94 LDKDP-CTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 +D I ++N+ L + G G+NL +I+V F W+ + Q ++R Sbjct: 548 AHEDRIAAIDDYNKPDSEKFLFLLTTRAGGLGINLTT-ADIVVLFDSDWNPQADLQAMDR 606 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 + G + V+V+ + + I+E VL+R K + L++ + + Sbjct: 607 -----AHRIGQTKQVYVFRFVTEGAIEEKVLERAAQKLRLDQLVIQQGRSQ 652 >gi|302695141|ref|XP_003037249.1| hypothetical protein SCHCODRAFT_73063 [Schizophyllum commune H4-8] gi|300110946|gb|EFJ02347.1| hypothetical protein SCHCODRAFT_73063 [Schizophyllum commune H4-8] Length = 1205 Score = 95.0 bits (235), Expect = 6e-18, Method: Composition-based stats. Identities = 25/139 (17%), Positives = 53/139 (38%), Gaps = 17/139 (12%) Query: 69 APIIVAYHFNSDLARLQKAFPQGRTL-----------DKDPCTIQEWNEGKIPLLFAHPA 117 +V + + L ++++A D+ + +L Sbjct: 1051 TKTVVFSQWTTMLDKIEEALDVAGIRYDRLDGTMKRDDRTRAMDALKYDPGCEVLLVSLK 1110 Query: 118 SCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 + G GLNL + + +W+ Q ++RI + G R V LI +NTI+ Sbjct: 1111 AGGVGLNLT-AASRVYLMDPYWNPAVENQAVDRI-----HRLGQTRPVTTVKLIIENTIE 1164 Query: 178 ELVLQRLRTKSTIQDLLLN 196 +L+ + K+ + ++ L+ Sbjct: 1165 ARLLEVQKKKTALANMTLD 1183 >gi|145346994|ref|XP_001417965.1| predicted protein [Ostreococcus lucimarinus CCE9901] gi|144578193|gb|ABO96258.1| predicted protein [Ostreococcus lucimarinus CCE9901] Length = 609 Score = 95.0 bits (235), Expect = 6e-18, Method: Composition-based stats. Identities = 26/175 (14%), Positives = 64/175 (36%), Gaps = 20/175 (11%) Query: 35 LANGAVYYDEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQ------- 85 + +GA+ + K++ L+ ++ + A + ++ + L L+ Sbjct: 412 MLDGALKDKMLDPEIGLQSAKVQRLQELLVELKAKGSRPLIFSQWKIMLDILEWVLHHMG 471 Query: 86 ---KAFPQGRTLDKDPCTIQEWNEGK--IPLLFAHPASCGHGLNLQYGGNILVFFSLWWD 140 +D + +N + + G GLNL G + ++ ++ Sbjct: 472 WKYARLDGDTAVDNRQELVDRFNAKDSYLDTFILSTRAGGQGLNLT-GADTVILHDCDFN 530 Query: 141 LEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 + +Q +R + G + V VY L+ + ++DE ++ K + +L Sbjct: 531 PQIDRQAEDRC-----HRLGQTKTVTVYRLVTEGSVDEKIVAIAEQKLNLGSTIL 580 >gi|19075231|ref|NP_587731.1| fun thirty related protein Fft2 [Schizosaccharomyces pombe 972h-] gi|74676118|sp|O74842|FFT2_SCHPO RecName: Full=Uncharacterized ATP-dependent helicase fft2; AltName: Full=Fun thirty-related protein 2 gi|3668152|emb|CAA21109.1| fun thirty related protein Fft2 [Schizosaccharomyces pombe] Length = 1284 Score = 95.0 bits (235), Expect = 6e-18, Method: Composition-based stats. Identities = 35/174 (20%), Positives = 67/174 (38%), Gaps = 21/174 (12%) Query: 41 YYDEEKHWKEVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQKAFP--------- 89 Y ++ W + KI+ L+ ++ K + I++ F L L++ Sbjct: 913 YTLKDDPW--MDSGKIRVLKELLPKMKEEGSRILLFSQFTQMLDILEQVLDTLKISYVRL 970 Query: 90 QGRTLDKDPCTIQEW--NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQM 147 G T + I + E + + + G G+NL N+++ + ++ + Q Sbjct: 971 DGSTQVEVRQDIIDQFHKEEDVTVFLLSTKAGGFGINL-ACANVVILYDCSYNPFDDLQA 1029 Query: 148 IERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 +R + G R V V LI NTI+E + + TK + L + K Sbjct: 1030 EDR-----AHRVGQVREVTVIRLITDNTIEEYIQKLANTKLALDMSLSSDGKDR 1078 >gi|116181940|ref|XP_001220819.1| hypothetical protein CHGG_01598 [Chaetomium globosum CBS 148.51] gi|88185895|gb|EAQ93363.1| hypothetical protein CHGG_01598 [Chaetomium globosum CBS 148.51] Length = 843 Score = 95.0 bits (235), Expect = 6e-18, Method: Composition-based stats. Identities = 42/209 (20%), Positives = 81/209 (38%), Gaps = 22/209 (10%) Query: 1 MKQYHKFQ-RELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKAL 59 MK+ + + ++ D ++A + + C Y + W K+KAL Sbjct: 611 MKRVSQAELKQPKLDHLTNELKALSDFELHLWCRDYKCIKGYDLPDDSW--TDCAKVKAL 668 Query: 60 EVIIE--KANAAPIIVAYHFNSDLAR---------LQKAFPQGRT-LDKDPCTIQEWNEG 107 ++ +AN +V F + ++ QG T + I E+N Sbjct: 669 LELVRKYQANGDRALVFTRFAKVIEILGECLASEGIEYLSLQGNTDVSARQELINEFNAD 728 Query: 108 K-IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVF 166 + IP+ S G G+NL N ++ F + ++ Q R + G R V Sbjct: 729 ESIPVFLLTTGSGGTGINLT-AANKVIIFDQSDNPQDDIQA-----ENRAHRLGQTRPVE 782 Query: 167 VYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 + LI++ T++ELV + K + + ++ Sbjct: 783 IIRLISEGTVEELVYKACEKKLELANKVV 811 >gi|68467034|ref|XP_722432.1| hypothetical protein CaO19.9102 [Candida albicans SC5314] gi|46444408|gb|EAL03683.1| hypothetical protein CaO19.9102 [Candida albicans SC5314] Length = 1690 Score = 95.0 bits (235), Expect = 6e-18, Method: Composition-based stats. Identities = 43/227 (18%), Positives = 85/227 (37%), Gaps = 35/227 (15%) Query: 2 KQYHKFQRELYCDLQGEN-----IEAFNSASKTVKCLQLANG-AVYYDEEKHW---KEVH 52 K Y + R + N+ ++ ++ ++ N VY + E E + Sbjct: 1035 KLYQQMLRYNMLYAGDPANGSVPVTIKNANNQIMQLKKICNHPFVYEEVENLINPNIETN 1094 Query: 53 DE------KIKALEVIIEK--ANAAPIIVAYH------FNSDLAR---LQKAFPQGRTLD 95 D+ K + L+ ++ K A +++ + D R ++ G T Sbjct: 1095 DQIWRVAGKFELLDKVLPKFKATGHKVLIFFQMTQIMNIMEDFLRFRGMKYMRLDGGTKA 1154 Query: 96 KDPCTI-QEWNEGKIPLL--FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIG 152 D + + +N + G GLNLQ + ++ F W+ + Q Sbjct: 1155 DDRTDLLKSFNAPDSDYFCFLLSTRAGGLGLNLQT-ADTVIIFDTDWNPHQDLQA----- 1208 Query: 153 VTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 R + G K V + LI +N+++E++L+R K I ++ A K Sbjct: 1209 QDRAHRIGQKNEVRILRLITENSVEEMILERAHKKLEIDGKVIQAGK 1255 >gi|326431158|gb|EGD76728.1| SNF2 family DNA-dependent ATPase [Salpingoeca sp. ATCC 50818] Length = 1797 Score = 95.0 bits (235), Expect = 6e-18, Method: Composition-based stats. Identities = 29/147 (19%), Positives = 56/147 (38%), Gaps = 18/147 (12%) Query: 65 KANAAPIIVAYHFNSDLARLQKAFPQGRTL----------DKDPCTIQEWNEGK--IPLL 112 +A ++ F S L L+ F D ++ +N + Sbjct: 1132 RAGRHRTLIFSQFTSLLTVLEDYFAAKGIKYLRMDGSTSADDRAELLRLFNAPDSEYEIF 1191 Query: 113 FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIA 172 + G GLNLQ + ++ + W+ + Q R + G R V V+ L+ Sbjct: 1192 ILSTRAGGLGLNLQT-ADTVIIYDSDWNPHQDLQA-----QDRAHRIGQTREVRVFRLVT 1245 Query: 173 QNTIDELVLQRLRTKSTIQDLLLNALK 199 N+++E +L+R + K + ++ A K Sbjct: 1246 VNSVEERILERAKYKLDVDQKVIQAGK 1272 >gi|323337858|gb|EGA79098.1| Chd1p [Saccharomyces cerevisiae Vin13] Length = 1329 Score = 95.0 bits (235), Expect = 6e-18, Method: Composition-based stats. Identities = 28/159 (17%), Positives = 62/159 (38%), Gaps = 20/159 (12%) Query: 52 HDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARL----------QKAFPQGRTLDKDPC 99 K+ L+ ++ + + +++ L L + + Sbjct: 693 SSGKMVLLDQLLTRLKKDGHRVLIFSQMVRMLDILGDYLSIKGINFQRLDGTVPSAQRRI 752 Query: 100 TIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 +I +N + + G G+NL + +V F W+ + Q + R Sbjct: 753 SIDHFNSPDSNDFVFLLSTRAGGLGINLMT-ADTVVIFDSDWNPQADLQAMAR-----AH 806 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + G K V VY L++++T++E VL+R R K ++ +++ Sbjct: 807 RIGQKNHVMVYRLVSKDTVEEEVLERARKKMILEYAIIS 845 >gi|242058897|ref|XP_002458594.1| hypothetical protein SORBIDRAFT_03g036380 [Sorghum bicolor] gi|241930569|gb|EES03714.1| hypothetical protein SORBIDRAFT_03g036380 [Sorghum bicolor] Length = 1255 Score = 95.0 bits (235), Expect = 6e-18, Method: Composition-based stats. Identities = 29/160 (18%), Positives = 59/160 (36%), Gaps = 19/160 (11%) Query: 44 EEKHWKEVHDEKIKA--LEVIIEKANAAPIIVAYHFNSDLA----RLQKAFPQGRTLDKD 97 + K + EK I+ IV + L L+ + R LD Sbjct: 1074 DSKCSIGLESEKFDGRGTSEQIDTKLTEKAIVFSQWTRMLDLLEVHLKASHVTYRRLDGT 1133 Query: 98 ------PCTIQEWNE-GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 ++++N ++ ++ + GLN+ ++L+ LWW+ Q ++R Sbjct: 1134 MSVAARDKAVKDFNTVPEVTVMIMSLKAASLGLNMVAACHVLML-DLWWNPTTEDQAVDR 1192 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 + G R V V L ++T+++ +L K + Sbjct: 1193 -----AHRIGQTRPVTVSRLTIKDTVEDRILALQEKKREM 1227 >gi|312066349|ref|XP_003136228.1| SNF2 family domain-containing protein [Loa loa] gi|307768614|gb|EFO27848.1| SNF2 family domain-containing protein [Loa loa] Length = 1965 Score = 95.0 bits (235), Expect = 6e-18, Method: Composition-based stats. Identities = 28/155 (18%), Positives = 61/155 (39%), Gaps = 19/155 (12%) Query: 55 KIKALEVIIEKAN--AAPIIVAYHFNSDLARLQK----------AFPQGRTLDKDPCTIQ 102 K++ L ++ ++ L LQ +++ + Sbjct: 1339 KLQVLNSLLRDLFLYKHRCLIFTQMARVLDILQAFLSFHGYQYFRLDGTTGIEQRQAMTE 1398 Query: 103 EWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGF 161 +N + KI S G G+NL G + ++F+ W+ Q +R + G Sbjct: 1399 RFNADPKIFCFILSTRSGGIGVNLT-GADTVIFYDSDWNPTMDAQAQDRC-----HRIGQ 1452 Query: 162 KRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 R V +Y L+++ TI+E +L++ K + ++ ++ Sbjct: 1453 TRNVTIYRLVSERTIEENILRKAMQKRRLGEMAID 1487 >gi|241948531|ref|XP_002416988.1| ATP-dependent chromodomain helicase, putative; chromodomain protein 1, putative [Candida dubliniensis CD36] gi|223640326|emb|CAX44576.1| ATP-dependent chromodomain helicase, putative [Candida dubliniensis CD36] Length = 1406 Score = 95.0 bits (235), Expect = 6e-18, Method: Composition-based stats. Identities = 28/162 (17%), Positives = 60/162 (37%), Gaps = 20/162 (12%) Query: 49 KEVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARL----------QKAFPQGRTLDK 96 + K+ LE ++ + +++ L L + K Sbjct: 665 IVMSSGKMVLLEQLLSRLKKEGHRVLIFSQMVRMLDILGDYMFIKGYQFQRLDGTVPSSK 724 Query: 97 DPCTIQEWNE--GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 I +N K + G G+NL + ++ F W+ + Q + R Sbjct: 725 RKIAIDHFNALGSKDFAFLLSTRAGGLGINLMT-ADTVIIFDSDWNPQADLQAMAR---- 779 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + G K V VY ++++T++E +L+R R K ++ +++ Sbjct: 780 -AHRIGQKNHVSVYRFVSKDTVEEQILERARKKMVLEYAIIS 820 >gi|224085664|ref|XP_002307656.1| chromatin remodeling complex subunit [Populus trichocarpa] gi|222857105|gb|EEE94652.1| chromatin remodeling complex subunit [Populus trichocarpa] Length = 1206 Score = 95.0 bits (235), Expect = 6e-18, Method: Composition-based stats. Identities = 33/156 (21%), Positives = 56/156 (35%), Gaps = 19/156 (12%) Query: 53 DEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQ----------KAFPQGRTLDKDPCT 100 K+K + +++ + +++ L + + + Sbjct: 738 SGKMKVVAQVLKVWQEQGHRVLLFTQTQQMLDIFENFLNSGGYNYRRMDGSTPIKLRMSI 797 Query: 101 IQEWNE-GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQA 159 I E+N G I + G G NL G N ++ F W+ Q ER + Sbjct: 798 IDEFNNSGDIFIFILTTKVGGLGTNLT-GANRVIIFDPDWNPSTDMQARERAW-----RI 851 Query: 160 GFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 G K+ V VY LI TI+E V R K + + +L Sbjct: 852 GQKKDVTVYRLITGGTIEEKVYHRQIYKHFLTNKIL 887 >gi|145482121|ref|XP_001427083.1| hypothetical protein [Paramecium tetraurelia strain d4-2] gi|124394162|emb|CAK59685.1| unnamed protein product [Paramecium tetraurelia] Length = 761 Score = 95.0 bits (235), Expect = 6e-18, Method: Composition-based stats. Identities = 33/162 (20%), Positives = 73/162 (45%), Gaps = 19/162 (11%) Query: 48 WKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQ---------GRTLDK 96 ++ K L++++++ +++ ++ L +++ Q G+ + K Sbjct: 450 VQDYQSVKFNCLKILVDQCKEQNEKVVINSYYRQTLDQIEHNLIQWNLKFLRLDGKVVQK 509 Query: 97 DP-CTIQEWNEGK-IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 + E+N+ K I + + S G GLNL G N ++ + W+ Q++ RI Sbjct: 510 QRLTLVDEFNKDKDITVFLLNGKSGGTGLNL-VGANKMICVEVDWNPANDSQVMGRIW-- 566 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + G ++ V +Y LI T +E ++QR TK + +++ Sbjct: 567 ---RDGQQKQVHIYRLITCGTYEEKIMQRQLTKENLSQNIVD 605 >gi|72391474|ref|XP_846031.1| DNA excision repair protein [Trypanosoma brucei TREU927] gi|62176576|gb|AAX70681.1| DNA excision repair protein, putative [Trypanosoma brucei] gi|70802567|gb|AAZ12472.1| DNA excision repair protein, putative [Trypanosoma brucei brucei strain 927/4 GUTat10.1] Length = 1126 Score = 95.0 bits (235), Expect = 6e-18, Method: Composition-based stats. Identities = 33/165 (20%), Positives = 62/165 (37%), Gaps = 19/165 (11%) Query: 44 EEKHWKEVHDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAFPQGRTLD------ 95 + K++ L +++ + +V + L ++ Q Sbjct: 788 SNRPVNYEGSSKLQTLRQLLKLWQRGGQRALVFSQTRAMLDIIENMCEQESLTYIRMDGT 847 Query: 96 ----KDPCTIQEWNEGK-IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 + + +NE I + G G+NL G + +V F W+ +Q ER Sbjct: 848 TNSLRRQELMDRFNEDDRIVVALLTTRVGGVGVNL-IGADRVVIFDPDWNPVTDEQARER 906 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 + G R V VY LI+ T++E VL+R K+ + + +L Sbjct: 907 AW-----RIGQTRDVGVYRLISSGTVEEAVLRRQLAKTYVTEKVL 946 >gi|148230804|ref|NP_001085120.1| RAD54 homolog B [Xenopus laevis] gi|47939775|gb|AAH72215.1| MGC81308 protein [Xenopus laevis] Length = 895 Score = 95.0 bits (235), Expect = 6e-18, Method: Composition-based stats. Identities = 28/151 (18%), Positives = 60/151 (39%), Gaps = 18/151 (11%) Query: 62 IIEKANAAPIIVAYHFNSDLARLQK----------AFPQGRTLDKDPCTIQEWNEG--KI 109 I E + + +++ H+ L LQ + + + +N Sbjct: 634 IRELSPSERVVLVSHYTQTLNILQALCVQHGYSCTRLDGQTPVTQRQHIVDGFNSKYSSD 693 Query: 110 PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYY 169 + + G GLNL G + L+ + + W+ Q + R+ + G +R V +Y Sbjct: 694 FIFLLSSKAGGVGLNL-IGASHLILYDIDWNPANDIQAMARVW-----RDGQRRTVHIYR 747 Query: 170 LIAQNTIDELVLQRLRTKSTIQDLLLNALKK 200 L+ +++E + QR +K + +++ KK Sbjct: 748 LLTTGSLEEKIYQRQISKQGLSGAVVDLTKK 778 >gi|11035016|gb|AAG01537.2|AF292095_1 imitation switch ISWI [Xenopus laevis] Length = 1046 Score = 95.0 bits (235), Expect = 6e-18, Method: Composition-based stats. Identities = 42/230 (18%), Positives = 88/230 (38%), Gaps = 40/230 (17%) Query: 1 MKQY---HKFQRELYCDLQGENIEAFNSASKTVK------CLQL--ANGAVYYDEEKHW- 48 +K Y K QRE Y + ++I+ NS+ KT K +QL Y + Sbjct: 403 IKIYVGLSKMQREWYTKILMKDIDILNSSGKTDKMRLLNILMQLRKCCNHPYLFDGAEPG 462 Query: 49 --------KEVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQ---------KAFP 89 + K+ L+ ++ K + I++ L L+ Sbjct: 463 PPYTTDLHLATNSGKMMVLDKLLPKLKEQDSRILIFSQMTRVLDILEDYCMWRNYEYCRL 522 Query: 90 QGRTLDKDPC-TIQEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 G+T ++ +I +N + + G G+NL ++++ + W+ + Q Sbjct: 523 DGQTPHEERQESIIAYNAPGSTKFIFMLSTRAGGLGINL-ATADVVIIYDSDWNPQVDLQ 581 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 ++R + G + V V+ I NT++E +++R K + +++ Sbjct: 582 AMDR-----AHRIGQTKTVRVFRFITDNTVEERIVERAEMKLRLDSIVIQ 626 >gi|256544992|ref|ZP_05472360.1| SNF2 family prophage LambdaSa04, helicase [Anaerococcus vaginalis ATCC 51170] gi|256399288|gb|EEU12897.1| SNF2 family prophage LambdaSa04, helicase [Anaerococcus vaginalis ATCC 51170] Length = 78 Score = 94.6 bits (234), Expect = 6e-18, Method: Composition-based stats. Identities = 33/75 (44%), Positives = 53/75 (70%), Gaps = 1/75 (1%) Query: 11 LYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAP 70 + ++ ++I+A NSA+ + K LQ+A+G+VY DE+K+ +HD KI ALE +IE AN P Sbjct: 1 MVVSIKEKDIDAVNSAALSNKLLQMASGSVY-DEDKNMIRIHDRKIDALENLIEGANGKP 59 Query: 71 IIVAYHFNSDLARLQ 85 + +AY + SDL R++ Sbjct: 60 VPIAYWYKSDLKRIK 74 >gi|149408367|ref|YP_001294470.1| hypothetical protein ORF053 [Pseudomonas phage F8] gi|219523924|ref|YP_002455985.1| helicase [Pseudomonas phage PB1] gi|190333520|gb|ACE73775.1| helicase [Pseudomonas phage PB1] Length = 519 Score = 94.6 bits (234), Expect = 6e-18, Method: Composition-based stats. Identities = 38/215 (17%), Positives = 86/215 (40%), Gaps = 24/215 (11%) Query: 2 KQYHKFQRELYCDLQGEN---IEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDE---- 54 K Y + + + + L+ E+ +F++A+ K Q+A+G + E D Sbjct: 300 KIYQRVEEDYHFVLKNEDFMLDVSFDAAAARSKLKQVASGYINVYGEPVILPPEDNPRFA 359 Query: 55 -KIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFP---------QGRTLD-KDPCTIQE 103 LE ++E+ II+ ++ ++ G T + + I + Sbjct: 360 VFTDLLEGLLEEDPERSIIIWAMRIHEIGQIAAYLEAQGISFGAYYGETKEAEREKLIDD 419 Query: 104 WNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKR 163 + ++ + +PA+ G G+ L ++ ++++ D E Q R + G Sbjct: 420 FQAKRVQVFLGNPAAAGIGITLT-AADVAIYYTTDEDNELRMQ-----SEDRNHRIGTIN 473 Query: 164 AVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNAL 198 +V + LI ++IDE + L K + +++ + Sbjct: 474 SVLYFDLICLDSIDEKIQVSLEWKRNLASYVVDGV 508 >gi|325117475|emb|CBZ53027.1| hypothetical protein NCLIV_028160 [Neospora caninum Liverpool] Length = 2544 Score = 94.6 bits (234), Expect = 6e-18, Method: Composition-based stats. Identities = 22/138 (15%), Positives = 54/138 (39%), Gaps = 17/138 (12%) Query: 68 AAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIP--LLFAHPASCGHGLNL 125 +++ RL + + ++ +N + G G+NL Sbjct: 1321 GHRVLIFSQ-----MRLDGTMAK----EVRRKAMEHFNAKNSEDFCFLLSTKAGGLGINL 1371 Query: 126 QYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLR 185 + ++ F W+ + Q R + G R V +Y L+ +++I++ +L+R + Sbjct: 1372 T-SADTVIIFDSDWNPQNDLQAEAR-----AHRIGQTRTVQIYRLVTKDSIEQTILERAK 1425 Query: 186 TKSTIQDLLLNALKKETI 203 K + L++ L + ++ Sbjct: 1426 AKMVLDTLVVQGLNQRSL 1443 >gi|261329556|emb|CBH12538.1| DNA excision repair protein, putative [Trypanosoma brucei gambiense DAL972] Length = 1126 Score = 94.6 bits (234), Expect = 6e-18, Method: Composition-based stats. Identities = 33/165 (20%), Positives = 62/165 (37%), Gaps = 19/165 (11%) Query: 44 EEKHWKEVHDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAFPQGRTLD------ 95 + K++ L +++ + +V + L ++ Q Sbjct: 788 SNRPVNYEGSSKLQTLRQLLKLWQRGGQRALVFSQTRAMLDIIENMCEQESLTYIRMDGT 847 Query: 96 ----KDPCTIQEWNEGK-IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 + + +NE I + G G+NL G + +V F W+ +Q ER Sbjct: 848 TNSLRRQELMDRFNEDDRIVVALLTTRVGGVGVNL-IGADRVVIFDPDWNPVTDEQARER 906 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 + G R V VY LI+ T++E VL+R K+ + + +L Sbjct: 907 AW-----RIGQTRDVGVYRLISSGTVEEAVLRRQLAKTYVTEKVL 946 >gi|222619356|gb|EEE55488.1| hypothetical protein OsJ_03673 [Oryza sativa Japonica Group] Length = 1270 Score = 94.6 bits (234), Expect = 6e-18, Method: Composition-based stats. Identities = 25/133 (18%), Positives = 52/133 (39%), Gaps = 17/133 (12%) Query: 69 APIIVAYHFNSDLA----RLQKAFPQGRTLDKD------PCTIQEWN-EGKIPLLFAHPA 117 IV + L L+ + R LD ++++N ++ ++ Sbjct: 1116 EKAIVFSQWTRMLDLVEVHLKSSHLSYRRLDGTMSVAARDRAVKDFNTNPEVSVMIMSLK 1175 Query: 118 SCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 + GLN+ ++L+ LWW+ Q ++R + G R V V L ++T++ Sbjct: 1176 AASLGLNMVAACHVLLL-DLWWNPTTEDQAVDR-----AHRIGQTRPVTVSRLTIKDTVE 1229 Query: 178 ELVLQRLRTKSTI 190 + +L K + Sbjct: 1230 DRILALQEKKREM 1242 >gi|218189165|gb|EEC71592.1| hypothetical protein OsI_03975 [Oryza sativa Indica Group] Length = 1270 Score = 94.6 bits (234), Expect = 6e-18, Method: Composition-based stats. Identities = 25/133 (18%), Positives = 52/133 (39%), Gaps = 17/133 (12%) Query: 69 APIIVAYHFNSDLA----RLQKAFPQGRTLDKD------PCTIQEWN-EGKIPLLFAHPA 117 IV + L L+ + R LD ++++N ++ ++ Sbjct: 1116 EKAIVFSQWTRMLDLVEVHLKSSHLSYRRLDGTMSVAARDRAVKDFNTNPEVSVMIMSLK 1175 Query: 118 SCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 + GLN+ ++L+ LWW+ Q ++R + G R V V L ++T++ Sbjct: 1176 AASLGLNMVAACHVLLL-DLWWNPTTEDQAVDR-----AHRIGQTRPVTVSRLTIKDTVE 1229 Query: 178 ELVLQRLRTKSTI 190 + +L K + Sbjct: 1230 DRILALQEKKREM 1242 >gi|115440307|ref|NP_001044433.1| Os01g0779400 [Oryza sativa Japonica Group] gi|53792212|dbj|BAD52845.1| putative ATPase [Oryza sativa Japonica Group] gi|113533964|dbj|BAF06347.1| Os01g0779400 [Oryza sativa Japonica Group] gi|215701396|dbj|BAG92820.1| unnamed protein product [Oryza sativa Japonica Group] Length = 1213 Score = 94.6 bits (234), Expect = 6e-18, Method: Composition-based stats. Identities = 25/133 (18%), Positives = 52/133 (39%), Gaps = 17/133 (12%) Query: 69 APIIVAYHFNSDLA----RLQKAFPQGRTLDKD------PCTIQEWN-EGKIPLLFAHPA 117 IV + L L+ + R LD ++++N ++ ++ Sbjct: 1059 EKAIVFSQWTRMLDLVEVHLKSSHLSYRRLDGTMSVAARDRAVKDFNTNPEVSVMIMSLK 1118 Query: 118 SCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 + GLN+ ++L+ LWW+ Q ++R + G R V V L ++T++ Sbjct: 1119 AASLGLNMVAACHVLLL-DLWWNPTTEDQAVDR-----AHRIGQTRPVTVSRLTIKDTVE 1172 Query: 178 ELVLQRLRTKSTI 190 + +L K + Sbjct: 1173 DRILALQEKKREM 1185 >gi|53792213|dbj|BAD52846.1| putative ATPase [Oryza sativa Japonica Group] Length = 1228 Score = 94.6 bits (234), Expect = 6e-18, Method: Composition-based stats. Identities = 25/133 (18%), Positives = 52/133 (39%), Gaps = 17/133 (12%) Query: 69 APIIVAYHFNSDLA----RLQKAFPQGRTLDKD------PCTIQEWN-EGKIPLLFAHPA 117 IV + L L+ + R LD ++++N ++ ++ Sbjct: 1074 EKAIVFSQWTRMLDLVEVHLKSSHLSYRRLDGTMSVAARDRAVKDFNTNPEVSVMIMSLK 1133 Query: 118 SCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 + GLN+ ++L+ LWW+ Q ++R + G R V V L ++T++ Sbjct: 1134 AASLGLNMVAACHVLLL-DLWWNPTTEDQAVDR-----AHRIGQTRPVTVSRLTIKDTVE 1187 Query: 178 ELVLQRLRTKSTI 190 + +L K + Sbjct: 1188 DRILALQEKKREM 1200 >gi|198435106|ref|XP_002121833.1| PREDICTED: similar to Helicase domino [Ciona intestinalis] Length = 2659 Score = 94.6 bits (234), Expect = 6e-18, Method: Composition-based stats. Identities = 31/167 (18%), Positives = 65/167 (38%), Gaps = 19/167 (11%) Query: 44 EEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQK----------AFPQG 91 E E K++ L V++ + I++ L L+ Sbjct: 1395 PEVRLIEYDCGKLQVLNVLLRRFWVEKHRILIFTQMTRVLDILEAFLSYHGYRYLRLDGS 1454 Query: 92 RTLDKDPCTIQEWNE-GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 +++ ++ +N +I S G G+NL G + +VF+ W+ Q +R Sbjct: 1455 TPIEQRMARMERFNNDPRIFCFILSTRSGGIGVNLT-GADTVVFYDSDWNPTMDAQAQDR 1513 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + G R V +Y LI++ T++E +L++ K + ++ + Sbjct: 1514 C-----HRIGQTRDVHIYRLISERTVEENILKKANQKRLLGEMAIEG 1555 >gi|39978121|ref|XP_370448.1| hypothetical protein MGG_06945 [Magnaporthe oryzae 70-15] gi|145013481|gb|EDJ98122.1| hypothetical protein MGG_06945 [Magnaporthe oryzae 70-15] Length = 1103 Score = 94.6 bits (234), Expect = 6e-18, Method: Composition-based stats. Identities = 31/151 (20%), Positives = 60/151 (39%), Gaps = 19/151 (12%) Query: 55 KIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAF----------PQGRTLDKDPCTIQ 102 K + L+ +++ + N ++V H L L+ F +++ + Sbjct: 572 KWRVLKDLLKFWEGNGDKVLVFSHSVKLLQVLRALFQTTHYSYSYLDGSLAIEERQQIVD 631 Query: 103 EWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGF 161 ++N + + + + G GLN+ N +V F W+ Q R + G Sbjct: 632 DFNSDPQQFVFLISTKAGGVGLNIT-SANKVVIFDPHWNPSWDLQA-----QDRAYRIGQ 685 Query: 162 KRAVFVYYLIAQNTIDELVLQRLRTKSTIQD 192 R V V+ L++Q TI+E+V R K + Sbjct: 686 TRDVDVFRLVSQGTIEEIVYARQIYKQQQAN 716 >gi|145493367|ref|XP_001432679.1| hypothetical protein [Paramecium tetraurelia strain d4-2] gi|124399793|emb|CAK65282.1| unnamed protein product [Paramecium tetraurelia] Length = 1021 Score = 94.6 bits (234), Expect = 6e-18, Method: Composition-based stats. Identities = 30/168 (17%), Positives = 75/168 (44%), Gaps = 20/168 (11%) Query: 52 HDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQ-----KAFPQGRTLDKDPCTIQEW 104 + K+K L++ ++K +I+ F S L L+ + + R P +++ Sbjct: 430 NSGKLKVLDMFLKKLYNENHKVILFSQFTSLLDILEDYLNYRKYKYCRLDGSTPIEVRDE 489 Query: 105 N-------EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 N + + + + G G+ L + ++ + ++ + QQ ++R Sbjct: 490 NIRNFQNPDSDLFIFLLSTRAGGLGITLT-AADTVIIYDSDFNPQLDQQAMDR-----AH 543 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIHV 205 + G K+ V VY LI Q+T++E +++R + K + ++++ + + + Sbjct: 544 RIGQKKNVMVYRLICQSTVEEKIIERQQIKLRWEQMIIDKGHSQMVGM 591 >gi|50289211|ref|XP_447036.1| hypothetical protein [Candida glabrata CBS 138] gi|49526345|emb|CAG59969.1| unnamed protein product [Candida glabrata] Length = 1904 Score = 94.6 bits (234), Expect = 6e-18, Method: Composition-based stats. Identities = 27/122 (22%), Positives = 52/122 (42%), Gaps = 8/122 (6%) Query: 77 FNSDLARLQKAFPQGRTLDKDPC-TIQEWNE-GKIPLLFAHPASCGHGLNLQYGGNILVF 134 F + + G +D ++++NE I L G GLNL G + ++F Sbjct: 1707 FKRYMPSVSYMRLDGSVDPRDRQKVVRKFNEDPSIDCLLLTTKVGGLGLNLT-GADTVIF 1765 Query: 135 FSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 W+ Q ++R + G K+ V VY ++ + T++E ++ + K I + Sbjct: 1766 VEHDWNPMNDLQAMDR-----AHRLGQKKVVNVYRIVTKGTLEEKIMGLQKFKMNIASTV 1820 Query: 195 LN 196 +N Sbjct: 1821 VN 1822 >gi|322824424|gb|EFZ29833.1| DNA repair protein, putative [Trypanosoma cruzi] Length = 748 Score = 94.6 bits (234), Expect = 7e-18, Method: Composition-based stats. Identities = 34/163 (20%), Positives = 64/163 (39%), Gaps = 21/163 (12%) Query: 53 DEKIKALEVIIEKANAA----PIIVAYHFNSDLARLQKAFPQGR----------TLDKDP 98 K++ + I+ +I+ HF S + + A + TL Sbjct: 553 STKLRMILDSIDTMKKEYPDDKMIIFSHFTSFMDVISVALDKLEISHLRLDGTMTLTNRN 612 Query: 99 CTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 I+ + + ++ A + G GLNL ++LV WW+ +Q + R Sbjct: 613 TVIRRFQASDDVRVILASKTATGVGLNLTAANHVLV-VDPWWNPAIEEQAVHRC-----Y 666 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKK 200 + G K+ V V +I ++TI++ + + K D +L A K Sbjct: 667 RIGQKKHVHVTRIIIEDTIEQYCHEICQRKKEFGDAILRAATK 709 >gi|148228303|ref|NP_001083868.1| SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5 [Xenopus laevis] gi|49899007|gb|AAH76715.1| ISWI protein [Xenopus laevis] Length = 1046 Score = 94.6 bits (234), Expect = 7e-18, Method: Composition-based stats. Identities = 41/230 (17%), Positives = 88/230 (38%), Gaps = 40/230 (17%) Query: 1 MKQY---HKFQRELYCDLQGENIEAFNSASKTVK------CLQL--ANGAVYYDEEKHW- 48 +K Y K QRE Y + ++I+ NS+ KT K +QL Y + Sbjct: 403 IKIYVGLSKMQREWYTKILMKDIDILNSSGKTDKMRLLNILMQLRKCCNHPYLFDGAEPG 462 Query: 49 --------KEVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQ---------KAFP 89 + K+ L+ ++ K + +++ L L+ Sbjct: 463 PPYTTDLHLATNSGKMMVLDKLLPKLKEQDSRVLIFSQMTRVLDILEDYCMWRNYEYCRL 522 Query: 90 QGRTLDKDPC-TIQEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 G+T ++ +I +N + + G G+NL ++++ + W+ + Q Sbjct: 523 DGQTPHEERQESIIAYNAPGSTKFIFMLSTRAGGLGINL-ATADVVIIYDSDWNPQVDLQ 581 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 ++R + G + V V+ I NT++E +++R K + +++ Sbjct: 582 AMDR-----AHRIGQTKTVRVFRFITDNTVEERIVERAEMKLRLDSIVIQ 626 >gi|71653924|ref|XP_815591.1| DNA repair protein [Trypanosoma cruzi strain CL Brener] gi|70880657|gb|EAN93740.1| DNA repair protein, putative [Trypanosoma cruzi] Length = 748 Score = 94.6 bits (234), Expect = 7e-18, Method: Composition-based stats. Identities = 34/163 (20%), Positives = 64/163 (39%), Gaps = 21/163 (12%) Query: 53 DEKIKALEVIIEKANAA----PIIVAYHFNSDLARLQKAFPQGR----------TLDKDP 98 K++ + I+ +I+ HF S + + A + TL Sbjct: 553 STKLRMILDSIDTMKKEYPDDKMIIFSHFTSFMDVISVALDKLEISHLRLDGTMTLTNRN 612 Query: 99 CTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 I+ + + ++ A + G GLNL ++LV WW+ +Q + R Sbjct: 613 TVIRRFQASDDVRVILASKTATGVGLNLTAANHVLV-VDPWWNPAIEEQAVHRC-----Y 666 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKK 200 + G K+ V V +I ++TI++ + + K D +L A K Sbjct: 667 RIGQKKHVHVTRIIIEDTIEQYCHEICQRKKEFGDAILRAATK 709 >gi|298715287|emb|CBJ27936.1| Chromodomain-helicase-DNA-binding protein 8 [Ectocarpus siliculosus] Length = 3661 Score = 94.6 bits (234), Expect = 7e-18, Method: Composition-based stats. Identities = 24/142 (16%), Positives = 55/142 (38%), Gaps = 17/142 (11%) Query: 65 KANAAPIIVAYHFNSDLARLQKAF---------PQGRTL-DKDPCTIQEWN-EGKIPLLF 113 ++ +++ F L +Q+ GRT ++ +I +N + + Sbjct: 2340 RSEGHKVLIFSQFIGMLDMVQEFLSLRGHKHERLDGRTTGNERQKSIDRFNRDPNSFVFL 2399 Query: 114 AHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQ 173 + G G+NL + + + W+ + Q + R + G ++V VY LI + Sbjct: 2400 LSTRAGGVGINLT-AADTCIIYDSDWNPQNDVQAMARC-----HRIGQTKSVMVYRLITR 2453 Query: 174 NTIDELVLQRLRTKSTIQDLLL 195 + + + R K ++ +L Sbjct: 2454 DCFESEMFNRASMKLGLEQAVL 2475 >gi|241157063|ref|XP_002407938.1| helicase, putative [Ixodes scapularis] gi|215494252|gb|EEC03893.1| helicase, putative [Ixodes scapularis] Length = 546 Score = 94.6 bits (234), Expect = 7e-18, Method: Composition-based stats. Identities = 34/200 (17%), Positives = 69/200 (34%), Gaps = 31/200 (15%) Query: 13 CDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAA-PI 71 L + + K +C ++ + K+ L ++E+ Sbjct: 350 LSLNKTADQGLDVLDKYSRCSEME------------RSFASCKLATLLQLLEEVPPKDKS 397 Query: 72 IVAYHFNSDLARLQKAF---------PQGRTLD-KDPCTIQEWNEG--KIPLLFAHPASC 119 +V + S LA +++ QG + + +N +L + Sbjct: 398 VVLSKWTSLLALVEEHLGRRAIPCATIQGSVPGQRRAEIVHSFNRDPRGPKVLLLSLEAG 457 Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 G GLNL G N + + W+ Q +RI + G + V + LI T++E Sbjct: 458 GVGLNL-IGANHMFALDVHWNPAMEAQAFDRI-----HRVGQTKPVVINRLICAGTVEER 511 Query: 180 VLQRLRTKSTIQDLLLNALK 199 +L+ K + D ++ + Sbjct: 512 ILELQAQKQRLADSVVAGRR 531 >gi|154316737|ref|XP_001557689.1| hypothetical protein BC1G_03786 [Botryotinia fuckeliana B05.10] gi|150845398|gb|EDN20591.1| hypothetical protein BC1G_03786 [Botryotinia fuckeliana B05.10] Length = 1130 Score = 94.6 bits (234), Expect = 7e-18, Method: Composition-based stats. Identities = 39/226 (17%), Positives = 81/226 (35%), Gaps = 43/226 (19%) Query: 6 KFQRELYCDLQGENIEAFNSAS--------KTVKCLQLAN-------------GAVYYDE 44 Q + Y + ++I+A N A +QL G Y + Sbjct: 423 DMQVKWYKKILEKDIDAVNGAGGKRESKTRLLNIVMQLRKCCNHPYLFEGAEPGPPYTTD 482 Query: 45 EKHWKEVHDEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQK----------AFPQGR 92 E + K+ L+ ++ + + +++ + L L+ G Sbjct: 483 EHLV--FNAGKMVMLDKLLTRMKKAGSRVLIFSQMSRLLDILEDYCVFREYKYCRIDGGT 540 Query: 93 TLDKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 + I ++N+ + + G G+NL +I+V + W+ + Q ++R Sbjct: 541 AHEDRIQAIDDYNKPDSEKFVFLLTTRAGGLGINLT-SADIVVLYDSDWNPQADLQAMDR 599 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + G + V VY + +N I+E VL+R K + L++ Sbjct: 600 -----AHRIGQTKQVVVYRFVTENAIEEKVLERAAQKLRLDQLVIQ 640 >gi|299746164|ref|XP_002911013.1| hypothetical protein CC1G_15553 [Coprinopsis cinerea okayama7#130] gi|298406931|gb|EFI27519.1| hypothetical protein CC1G_15553 [Coprinopsis cinerea okayama7#130] Length = 828 Score = 94.6 bits (234), Expect = 7e-18, Method: Composition-based stats. Identities = 37/169 (21%), Positives = 61/169 (36%), Gaps = 18/169 (10%) Query: 32 CLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAA-PIIVAYHFNSDLARLQ----- 85 C+ LA A + E+ +K L I +N I+ F S L +Q Sbjct: 627 CVDLAKQARQAELERPTSAKIRMVLKLLAKIDRDSNGEEKTIIFSQFTSMLDLIQPFLEE 686 Query: 86 KAFPQGR------TLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWW 139 K R D++ + N ++ + GLNL N ++ LWW Sbjct: 687 KGIKYTRYDGSMAPKDREAALEKIRNSKSTRVILISFKAGSTGLNLT-ACNNVILVDLWW 745 Query: 140 DLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKS 188 + Q +R + G KR V++Y L T+++ +L K Sbjct: 746 NPALEDQAFDR-----AHRYGQKRDVYIYKLKVDATVEDRILALQDKKR 789 >gi|256083470|ref|XP_002577966.1| helicase [Schistosoma mansoni] gi|238663311|emb|CAZ34204.1| helicase mot1, putative [Schistosoma mansoni] Length = 2340 Score = 94.6 bits (234), Expect = 7e-18, Method: Composition-based stats. Identities = 30/142 (21%), Positives = 58/142 (40%), Gaps = 19/142 (13%) Query: 69 APIIVAYHFNSDLAR----LQKAFP---------QGRTLDKDPCTIQEWNEGKIPLLFAH 115 ++ + L L+K FP ++ ++ + I L+ Sbjct: 2144 HRALIFFQTREMLQLTGEMLKKQFPWITATRLDGTVPVNERHNRVVKFNQDPSIDLMLLT 2203 Query: 116 PASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNT 175 A G GLNL G + ++F W+ + Q ++R + G +R V VY LI +++ Sbjct: 2204 TAVGGLGLNLT-GADTVIFVEHDWNPSKDLQAMDR-----AHRIGQRRTVNVYRLITEDS 2257 Query: 176 IDELVLQRLRTKSTIQDLLLNA 197 I+E ++ K + + +L A Sbjct: 2258 IEEQIMNLQAFKLHLANTVLTA 2279 >gi|157134957|ref|XP_001663375.1| hypothetical protein AaeL_AAEL013189 [Aedes aegypti] gi|108870352|gb|EAT34577.1| conserved hypothetical protein [Aedes aegypti] Length = 1904 Score = 94.6 bits (234), Expect = 7e-18, Method: Composition-based stats. Identities = 33/169 (19%), Positives = 67/169 (39%), Gaps = 30/169 (17%) Query: 52 HDEKIKALEVII--------EKA--NAAPIIVAYHFNSDLARL-----QKAFPQGRTLDK 96 H K+ AL+ ++ E N ++ + L + +K P L Sbjct: 1649 HSAKLPALKQLLLDCGIGTNEDMSVNQHRALIFCQLKAMLDIIENDLLKKHLPAVSYLRL 1708 Query: 97 DP--------CTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQM 147 D + ++N + I +L G GLNL G + ++F W+ + Q Sbjct: 1709 DGSVPPSSRHQIVTKFNGDPSIDVLLLTTQVGGLGLNLT-GADTVIFVEHDWNPMKDLQA 1767 Query: 148 IERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 ++R + G K+ V VY LI + +++E ++ + K + +++ Sbjct: 1768 MDR-----AHRIGQKKVVNVYRLITRKSLEEKIMGLQKFKLLTANTVVS 1811 >gi|70995832|ref|XP_752671.1| SNF2 family helicase/ATPase PasG [Aspergillus fumigatus Af293] gi|42820703|emb|CAF32016.1| possible swi2/snf2-like protein [Aspergillus fumigatus] gi|66850306|gb|EAL90633.1| SNF2 family helicase/ATPase PasG, putative [Aspergillus fumigatus Af293] gi|159131425|gb|EDP56538.1| SNF2 family helicase/ATPase PasG, putative [Aspergillus fumigatus A1163] Length = 867 Score = 94.6 bits (234), Expect = 7e-18, Method: Composition-based stats. Identities = 26/149 (17%), Positives = 58/149 (38%), Gaps = 18/149 (12%) Query: 67 NAAPIIVAYHFNSDLARLQK----------AFPQGRTLDKDPCT-IQEWN-EGKIPLLFA 114 I++ F + L LQ G D I+ +N + + Sbjct: 640 KGHKILIFSQFKTQLDILQDWATQLRGWNCCRIDGAISQTDRQAQIKAFNSDPGYKIFLL 699 Query: 115 HPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQN 174 + G G+NL + ++ + W+ ++ Q R + G + V VY L + Sbjct: 700 STRAGGQGINL-VAADTVILYDSDWNPQQDLQA-----QDRAHRIGQTKPVIVYRLATKG 753 Query: 175 TIDELVLQRLRTKSTIQDLLLNALKKETI 203 T+++ +L++ +K ++ L++ K ++ Sbjct: 754 TVEQTLLEKADSKRRLERLVIQKGKFRSL 782 >gi|312213639|emb|CBX93641.1| similar to ISWI chromatin-remodeling complex ATPase ISW2 [Leptosphaeria maculans] Length = 1310 Score = 94.6 bits (234), Expect = 7e-18, Method: Composition-based stats. Identities = 27/168 (16%), Positives = 61/168 (36%), Gaps = 26/168 (15%) Query: 53 DEKIKALEVIIEKA---NAAPIIVAYHFNSDLAR-------LQKAFPQGRTLD------- 95 K LE +++ +++ F L + + R L Sbjct: 696 SGKFILLEKLLKHTVFEQGKKVLIFSGFTRTLDYCEDLLSLISNRGEKFRHLRLDGSSAR 755 Query: 96 -KDPCTIQEWNE--GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIG 152 + I+ +N+ ++ + G G+NL + ++F W+ + Q R Sbjct: 756 ARRNLDIRLFNQEGSDYKVMLLSTRAGGLGINLTSAQD-VIFLDEDWNPQITLQAEAR-- 812 Query: 153 VTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKK 200 + G + V +Y L Q T++E ++ R+R K + + +++ Sbjct: 813 ---AHRIGQTKPVTIYKLCTQGTVEEQMMGRIRKKLYLSAKITESMQS 857 >gi|84998236|ref|XP_953839.1| SWI/SNF family trascriptional activator protein [Theileria annulata] gi|65304836|emb|CAI73161.1| SWI/SNF family trascriptional activator protein, putative [Theileria annulata] Length = 1012 Score = 94.6 bits (234), Expect = 7e-18, Method: Composition-based stats. Identities = 38/221 (17%), Positives = 83/221 (37%), Gaps = 32/221 (14%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKC-LQL--ANGAVY---------YDEEKHWK 49 + Y R+ +L ++ + + +QL A Y D Sbjct: 429 QLYRDLLRKNVPELGVDDNTKSGIHVQLLNLAMQLRKACNHPYLFEGYEDRNEDPFGEHV 488 Query: 50 EVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQ---------KAFPQGRTLDKDP 98 + K+ ++ +I + N++ I++ L L+ G T +D Sbjct: 489 VQNSGKLSLVDKLIPRLLGNSSRILIFSQMARMLDILEDYCRMRNYLYFRIDGNTSSEDR 548 Query: 99 C-TIQEWNEGK--IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTR 155 I +N+ + + + G G+NL ++++ + W+ + Q I+R Sbjct: 549 DYQISSFNQPDSMVNIFLLSTRAGGLGINL-ATADVVILYDSDWNPQVDLQAIDR----- 602 Query: 156 QRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + G + V+VY L+ Q TI+E +++R K + ++ Sbjct: 603 AHRIGQLKPVYVYRLVHQYTIEEKIIERATMKLQLDTAVIQ 643 >gi|19114572|ref|NP_593660.1| ATP-dependent DNA helicase Hrp1 [Schizosaccharomyces pombe 972h-] gi|15214054|sp|Q9US25|HRP1_SCHPO RecName: Full=Chromodomain helicase hrp1; AltName: Full=ATP-dependent helicase hrp1 gi|6714825|emb|CAB66168.1| ATP-dependent DNA helicase Hrp1 [Schizosaccharomyces pombe] Length = 1373 Score = 94.6 bits (234), Expect = 7e-18, Method: Composition-based stats. Identities = 27/159 (16%), Positives = 67/159 (42%), Gaps = 20/159 (12%) Query: 52 HDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARL-----QKAFPQGRTLDKDPCTIQE- 103 + K+ L+ ++++ + +++ L L + + R P +++ Sbjct: 702 NSGKMVLLDKLLQRLKHDGHRVLIFSQMVRMLNILGEYMSLRGYNYQRLDGTIPASVRRV 761 Query: 104 ----WNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 +N P + + G G+NL + ++ F W+ + Q + R Sbjct: 762 SIDHFNAPDSPDFVFLLSTRAGGLGINLNT-ADTVIIFDSDWNPQADLQAMAR-----AH 815 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + G K V VY ++++T++E +L+R R K ++ +++ Sbjct: 816 RIGQKNHVNVYRFLSKDTVEEDILERARRKMILEYAIIS 854 >gi|71028038|ref|XP_763662.1| ATP-dependant helicase [Theileria parva strain Muguga] gi|68350616|gb|EAN31379.1| ATP-dependant helicase, putative [Theileria parva] Length = 969 Score = 94.6 bits (234), Expect = 7e-18, Method: Composition-based stats. Identities = 39/169 (23%), Positives = 65/169 (38%), Gaps = 22/169 (13%) Query: 44 EEKHWKE-VHDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAFPQGRTLDK---- 96 K W E V K+ IIE K I++ + L + + + D+ Sbjct: 636 PSKRWTESVGSSKLNVSLKIIEMWKKENKKILLFTQTITMLNIIYEHLLETYEKDEILVL 695 Query: 97 --------DPCTIQEW-NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQM 147 I+++ N+ K+ L+ G GLNL I++ + W+ Q Sbjct: 696 YGKHTVKNRNKIIEQFSNDDKVFLMILTTKVGGIGLNLTAATRIII-YDPDWNPMTDMQA 754 Query: 148 IERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 ER + G K V +Y LI +TI+E + QR K + +L+ Sbjct: 755 KERC-----YRIGQKNEVIIYRLITASTIEEKIYQRQLYKYYLSQQILS 798 >gi|1597721|emb|CAA67494.1| putative helicase [Schizosaccharomyces pombe] Length = 1367 Score = 94.6 bits (234), Expect = 7e-18, Method: Composition-based stats. Identities = 27/159 (16%), Positives = 67/159 (42%), Gaps = 20/159 (12%) Query: 52 HDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARL-----QKAFPQGRTLDKDPCTIQE- 103 + K+ L+ ++++ + +++ L L + + R P +++ Sbjct: 696 NSGKMVLLDKLLQRLKHDGHRVLIFSQMVRMLNILGEYMSLRGYNYQRLDGTIPASVRRV 755 Query: 104 ----WNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 +N P + + G G+NL + ++ F W+ + Q + R Sbjct: 756 SIDHFNAPDSPDFVFLLSTRAGGLGINLNT-ADTVIIFDSDWNPQADLQAMAR-----AH 809 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + G K V VY ++++T++E +L+R R K ++ +++ Sbjct: 810 RIGQKNHVNVYRFLSKDTVEEDILERARRKMILEYAIIS 848 >gi|332025493|gb|EGI65656.1| DNA excision repair protein ERCC-6 [Acromyrmex echinatior] Length = 1020 Score = 94.6 bits (234), Expect = 7e-18, Method: Composition-based stats. Identities = 29/148 (19%), Positives = 53/148 (35%), Gaps = 17/148 (11%) Query: 67 NAAPIIVA---YHFNSDLARLQKA-------FPQGRTLDKDPCTIQEWNEGK-IPLLFAH 115 +++ L L + + + TIQ++N + Sbjct: 592 QGHRVLLFTQGRQMMHILESLLQREKYIYLRMDGTTAMSQRQQTIQKFNNDSSYFVFLLT 651 Query: 116 PASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNT 175 G G+NL G N +V + W+ Q ER + G + V VY LI T Sbjct: 652 TRVGGLGINLT-GANRVVIYDPDWNPATDAQARERAW-----RIGQNKQVTVYRLITAGT 705 Query: 176 IDELVLQRLRTKSTIQDLLLNALKKETI 203 I+E + R K + + +L+ ++ + Sbjct: 706 IEEKIYHRQIFKLLLSNKVLDEPRQRQL 733 >gi|258570209|ref|XP_002543908.1| CHD1 protein [Uncinocarpus reesii 1704] gi|237904178|gb|EEP78579.1| CHD1 protein [Uncinocarpus reesii 1704] Length = 1358 Score = 94.6 bits (234), Expect = 7e-18, Method: Composition-based stats. Identities = 29/176 (16%), Positives = 63/176 (35%), Gaps = 33/176 (18%) Query: 39 AVYYDEEKHWKEVHDEKIKALEVIIEKA---------------NAAPIIVAYHFNSDLAR 83 ++ + E+ + + AL +I + + +++ L Sbjct: 742 FMFANAEERILQGSTRREDALRALITSSGKMMLLDQLLAKLKNDGHRVLIFSQMVRMLDI 801 Query: 84 LQKAFPQG----RTLDKD------PCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNI 131 L + LD +I+ +N + G G+NL + Sbjct: 802 LADYMEARNFAYQRLDGTIAAGPRRLSIEHFNSPDSTDFAFLLSTRAGGLGINLMT-ADT 860 Query: 132 LVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTK 187 ++ F W+ + Q + R + G + V VY L++++T++E V++R R K Sbjct: 861 VILFDSDWNPQADLQAMAR-----AHRIGQTKPVSVYRLVSKDTVEEEVIERARNK 911 >gi|225446400|ref|XP_002274640.1| PREDICTED: hypothetical protein [Vitis vinifera] gi|302143309|emb|CBI21870.3| unnamed protein product [Vitis vinifera] Length = 874 Score = 94.6 bits (234), Expect = 7e-18, Method: Composition-based stats. Identities = 37/198 (18%), Positives = 74/198 (37%), Gaps = 20/198 (10%) Query: 14 DLQGENIEAFNSASKTVKCLQLANGAVYYDEE-KHWKEVHDEKIKALEVIIEK--ANAAP 70 D + +A +++ + L G + H K++ALE ++ ++ Sbjct: 477 DPDKQRKDAEFASAVFGTDIDLVGGNTQSESFMGLSDVKHCGKMRALEKLMLSWVSHGDK 536 Query: 71 IIVAYHFNSDLARLQK----------AFPQGRTLDKDPCTIQEWNE-GKIPLLFAHPASC 119 I++ + L L+K + + ++N + + Sbjct: 537 ILLFSYSVRMLDILEKFLIRKGYCFSRLDGSTPTNLRQSLVDDFNSSPSKQVFLISTRAG 596 Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 G GLNL N +V F W+ + Q R + G KR V V+ L+A +++EL Sbjct: 597 GLGLNL-VSANRVVIFDPNWNPAQDLQA-----QDRSFRYGQKRHVVVFRLLAAGSLEEL 650 Query: 180 VLQRLRTKSTIQDLLLNA 197 V R K + ++ ++ Sbjct: 651 VYSRQVYKQQLSNIAISG 668 >gi|242791140|ref|XP_002481699.1| SNF2 family helicase/ATPase, putative [Talaromyces stipitatus ATCC 10500] gi|242791145|ref|XP_002481700.1| SNF2 family helicase/ATPase, putative [Talaromyces stipitatus ATCC 10500] gi|218718287|gb|EED17707.1| SNF2 family helicase/ATPase, putative [Talaromyces stipitatus ATCC 10500] gi|218718288|gb|EED17708.1| SNF2 family helicase/ATPase, putative [Talaromyces stipitatus ATCC 10500] Length = 1118 Score = 94.6 bits (234), Expect = 7e-18, Method: Composition-based stats. Identities = 43/231 (18%), Positives = 86/231 (37%), Gaps = 43/231 (18%) Query: 6 KFQRELYCDLQGENIEAFNSAS--------KTVKCLQLAN-------------GAVYYDE 44 Q + Y + ++I+A N A+ +QL G Y + Sbjct: 423 DMQVKWYQKILEKDIDAVNGAAGKRESKTRLLNIVMQLRKCCNHPYLFEGAEPGPPYTTD 482 Query: 45 EKHWKEVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARL---------QKAFPQGRT 93 E + K+ L+ I+ + + +++ + L L + G T Sbjct: 483 EHLI--DNSGKMVVLDKILNRMKKQGSRVLIFSQMSRVLDILEDYCVFREHKYCRIDGST 540 Query: 94 LDKDP-CTIQEWNE--GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 +D I E+N + + G G+NL +I+V F W+ + Q ++R Sbjct: 541 AHEDRIAAIDEYNREGSDKFIFLLTTRAGGLGINLTT-ADIVVLFDSDWNPQADLQAMDR 599 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 + G K+ V V+ + ++ I+E VL+R K + L++ + + Sbjct: 600 -----AHRIGQKKQVVVFRFVTEHAIEEKVLERAAQKLRLDQLVIQQGRTQ 645 >gi|147857221|emb|CAN79218.1| hypothetical protein VITISV_012795 [Vitis vinifera] Length = 874 Score = 94.6 bits (234), Expect = 7e-18, Method: Composition-based stats. Identities = 37/198 (18%), Positives = 74/198 (37%), Gaps = 20/198 (10%) Query: 14 DLQGENIEAFNSASKTVKCLQLANGAVYYDEE-KHWKEVHDEKIKALEVIIEK--ANAAP 70 D + +A +++ + L G + H K++ALE ++ ++ Sbjct: 477 DPDKQRKDAEFASAVFGTDIDLVGGNTQSESFMGLSDVKHCGKMRALEKLMLSWVSHGDK 536 Query: 71 IIVAYHFNSDLARLQK----------AFPQGRTLDKDPCTIQEWNE-GKIPLLFAHPASC 119 I++ + L L+K + + ++N + + Sbjct: 537 ILLFSYSVRMLDILEKFLIRKGYCFSRLDGSTPTNLRQSLVDDFNSSPSKQVFLISTRAG 596 Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 G GLNL N +V F W+ + Q R + G KR V V+ L+A +++EL Sbjct: 597 GLGLNL-VSANRVVIFDPNWNPAQDLQA-----QDRSFRYGQKRHVVVFRLLAAGSLEEL 650 Query: 180 VLQRLRTKSTIQDLLLNA 197 V R K + ++ ++ Sbjct: 651 VYSRQVYKQQLSNIAISG 668 >gi|154420998|ref|XP_001583513.1| Type III restriction enzyme, res subunit family protein [Trichomonas vaginalis G3] gi|121917755|gb|EAY22527.1| Type III restriction enzyme, res subunit family protein [Trichomonas vaginalis G3] Length = 1468 Score = 94.6 bits (234), Expect = 7e-18, Method: Composition-based stats. Identities = 25/143 (17%), Positives = 50/143 (34%), Gaps = 18/143 (12%) Query: 67 NAAPIIVAYHFNSDLARLQK----------AFPQGRTLDKDPCTIQEWNEG--KIPLLFA 114 +++ L L++ D +I ++N+ I + Sbjct: 638 KGDKVLIFSQMVHVLDILEEYLHYRNYPYVRLDGSVVGDVRQESIDKFNDPEKDIFVFLL 697 Query: 115 HPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQN 174 + G GLNL N+++ + W+ + Q R + G V VY LI + Sbjct: 698 CTRAGGVGLNLTAATNVII-YDSDWNPQNDLQAQARC-----HRIGQTHDVKVYRLITRG 751 Query: 175 TIDELVLQRLRTKSTIQDLLLNA 197 T + + R K + +L++ Sbjct: 752 TYESDMFTRASMKLGLDQAILDS 774 >gi|19577362|emb|CAD28443.1| possible swi2/snf2-like protein [Aspergillus fumigatus] Length = 858 Score = 94.6 bits (234), Expect = 7e-18, Method: Composition-based stats. Identities = 26/149 (17%), Positives = 58/149 (38%), Gaps = 18/149 (12%) Query: 67 NAAPIIVAYHFNSDLARLQK----------AFPQGRTLDKDPCT-IQEWN-EGKIPLLFA 114 I++ F + L LQ G D I+ +N + + Sbjct: 631 KGHKILIFSQFKTQLDILQDWATQLRGWNCCRIDGAISQTDRQAQIKAFNSDPGYKIFLL 690 Query: 115 HPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQN 174 + G G+NL + ++ + W+ ++ Q R + G + V VY L + Sbjct: 691 STRAGGQGINL-VAADTVILYDSDWNPQQDLQA-----QDRAHRIGQTKPVIVYRLATKG 744 Query: 175 TIDELVLQRLRTKSTIQDLLLNALKKETI 203 T+++ +L++ +K ++ L++ K ++ Sbjct: 745 TVEQTLLEKADSKRRLERLVIQKGKFRSL 773 >gi|186492175|ref|NP_001117525.1| EDA16 (embryo sac development arrest 16); ATP binding / DNA binding / helicase/ nucleic acid binding / protein binding / zinc ion binding [Arabidopsis thaliana] gi|332195667|gb|AEE33788.1| SNF2, helicase and zinc finger domain-containing protein [Arabidopsis thaliana] Length = 1122 Score = 94.6 bits (234), Expect = 7e-18, Method: Composition-based stats. Identities = 27/134 (20%), Positives = 53/134 (39%), Gaps = 17/134 (12%) Query: 68 AAPIIVAYHFNSDLARLQKA----FPQGRTLDKD------PCTIQEWNE-GKIPLLFAHP 116 IV + L L+ + Q R LD +Q++N ++ ++ Sbjct: 965 GEKAIVFSQWTKMLNLLEASLVSSHIQYRRLDGTMSVAARDKAVQDFNTLPEVTVMIMSL 1024 Query: 117 ASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTI 176 + GLN+ ++L+ LWW+ Q I+R + G R V V ++T+ Sbjct: 1025 KAASLGLNMVAACHVLML-DLWWNPTTEDQAIDR-----AHRIGQTRPVTVVRFTVKDTV 1078 Query: 177 DELVLQRLRTKSTI 190 ++ +L + K + Sbjct: 1079 EDRILALQQKKRMM 1092 >gi|186492170|ref|NP_176309.2| EDA16 (embryo sac development arrest 16); ATP binding / DNA binding / helicase/ nucleic acid binding / protein binding / zinc ion binding [Arabidopsis thaliana] gi|332195665|gb|AEE33786.1| SNF2, helicase and zinc finger domain-containing protein [Arabidopsis thaliana] Length = 1280 Score = 94.6 bits (234), Expect = 7e-18, Method: Composition-based stats. Identities = 27/134 (20%), Positives = 53/134 (39%), Gaps = 17/134 (12%) Query: 68 AAPIIVAYHFNSDLARLQKA----FPQGRTLDKD------PCTIQEWNE-GKIPLLFAHP 116 IV + L L+ + Q R LD +Q++N ++ ++ Sbjct: 1123 GEKAIVFSQWTKMLNLLEASLVSSHIQYRRLDGTMSVAARDKAVQDFNTLPEVTVMIMSL 1182 Query: 117 ASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTI 176 + GLN+ ++L+ LWW+ Q I+R + G R V V ++T+ Sbjct: 1183 KAASLGLNMVAACHVLML-DLWWNPTTEDQAIDR-----AHRIGQTRPVTVVRFTVKDTV 1236 Query: 177 DELVLQRLRTKSTI 190 ++ +L + K + Sbjct: 1237 EDRILALQQKKRMM 1250 >gi|315040818|ref|XP_003169786.1| ATP-dependent helicase RIS1 [Arthroderma gypseum CBS 118893] gi|311345748|gb|EFR04951.1| ATP-dependent helicase RIS1 [Arthroderma gypseum CBS 118893] Length = 1050 Score = 94.6 bits (234), Expect = 7e-18, Method: Composition-based stats. Identities = 30/158 (18%), Positives = 58/158 (36%), Gaps = 18/158 (11%) Query: 52 HDEKIKALEVIIEKANAA-PIIVAYHFNSDLARLQKAFPQG-----------RTLDKDPC 99 KI+ L I+++ + IV F S L +++ G R ++ Sbjct: 808 TSAKIRHLMRILKRESGQSKFIVFSVFTSMLDKIEPFLKNGGIGYARYDGGMRNDLREAS 867 Query: 100 TIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQA 159 + N +L + GLNL + +V +W+ +Q I+R+ + Sbjct: 868 LNRLRNSSSTRVLLCSLRAGSLGLNLT-AASRVVILEPFWNPFVEEQAIDRV-----HRL 921 Query: 160 GFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 V VY L + T++E +L+ K + + Sbjct: 922 NQTVDVKVYKLTIKGTVEERILELQERKRELAKSTIEG 959 >gi|169612371|ref|XP_001799603.1| hypothetical protein SNOG_09308 [Phaeosphaeria nodorum SN15] gi|160702496|gb|EAT83500.2| hypothetical protein SNOG_09308 [Phaeosphaeria nodorum SN15] Length = 1333 Score = 94.6 bits (234), Expect = 7e-18, Method: Composition-based stats. Identities = 37/219 (16%), Positives = 81/219 (36%), Gaps = 35/219 (15%) Query: 5 HKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVH----------DE 54 + ++++ DL ++ +A +S+ +L N +++ + Sbjct: 774 RRLKKDVEKDLPDKDPKAASSS-----LRKLCNHPFVFEQVEEVMNPTKSTNDLLWRASG 828 Query: 55 KIKALEVIIE--KANAAPIIVAYH------FNSDLARLQK----AFPQGRTLDKDPCTIQ 102 K + L+ I+ + +++ + D RL+ D ++ Sbjct: 829 KFELLDRILPKFEKTGHRVLMFFQMTQIMNIMEDYLRLRGMKYMRLDGATKADDRSELLK 888 Query: 103 EWNEGKIPLL--FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 E+N P + G GLNLQ + ++ + W+ + Q R + G Sbjct: 889 EFNAPNSPYFCFLLSTRAGGLGLNLQT-ADTVIIYDSDWNPHQDLQA-----QDRAHRIG 942 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 K V + LI N+++E +L+R K + ++ A K Sbjct: 943 QKNEVRILRLITSNSVEEKILERANYKLDMDGKVIQAGK 981 >gi|326437899|gb|EGD83469.1| hypothetical protein PTSG_04077 [Salpingoeca sp. ATCC 50818] Length = 1562 Score = 94.6 bits (234), Expect = 7e-18, Method: Composition-based stats. Identities = 32/161 (19%), Positives = 59/161 (36%), Gaps = 22/161 (13%) Query: 53 DEKIKALEVIIEKA----NAAPIIVAYHFNSDLARLQKAFPQG-----------RTLDKD 97 KI+AL I+ + IV + S L +Q+A G ++ Sbjct: 1377 STKIRALLSEIKAMRQEDESNKCIVFSQWTSMLDLIQRAVESGGYTTARLDGSMSQQERS 1436 Query: 98 PCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 ++ + S G GLNL ++++ WW+ +Q I+R+ Sbjct: 1437 RALATFKSDPTCTVFLITLRSGGVGLNLTAASHVMLM-DPWWNPSVEEQAIDRV-----H 1490 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTK-STIQDLLLNA 197 + G + V V I T++E + K +Q L ++ Sbjct: 1491 RIGQDKPVCVKRFIMLGTVEERIRVLQAKKCQLVQSALASS 1531 >gi|242094948|ref|XP_002437964.1| hypothetical protein SORBIDRAFT_10g005630 [Sorghum bicolor] gi|241916187|gb|EER89331.1| hypothetical protein SORBIDRAFT_10g005630 [Sorghum bicolor] Length = 1147 Score = 94.6 bits (234), Expect = 7e-18, Method: Composition-based stats. Identities = 31/193 (16%), Positives = 65/193 (33%), Gaps = 30/193 (15%) Query: 32 CLQLANGAVYYDEEK----------HWKEVHDEKIKALEVIIEKA--NAAPIIVAYHFNS 79 +L DE K++ L+ ++ K +++ F Sbjct: 394 LRKLCCHGFMIDEPDFEPANPEEGLRRLLDSSGKMQLLDKMMVKLKEQGHRVLIYSQFQH 453 Query: 80 DLARLQKAF---------PQGRTLDKDPCT-IQEWNEGKIP--LLFAHPASCGHGLNLQY 127 L L+ G+ + I +N + G G+NL Sbjct: 454 MLDLLEDYLSYRKWSYERIDGKISGAERQIRIDRFNAKNSTRFCFLLSTRAGGLGINL-A 512 Query: 128 GGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTK 187 + ++ + W+ Q + R + G V +Y L+++ TI+E ++Q + K Sbjct: 513 TADTVIIYDSDWNPHADLQAMAR-----AHRLGQTSKVMIYRLVSRGTIEERMMQLTKKK 567 Query: 188 STIQDLLLNALKK 200 ++ L++ L K Sbjct: 568 ILLEHLVVGRLTK 580 >gi|294867966|ref|XP_002765317.1| DNA repair helicase, putative [Perkinsus marinus ATCC 50983] gi|239865330|gb|EEQ98034.1| DNA repair helicase, putative [Perkinsus marinus ATCC 50983] Length = 1182 Score = 94.6 bits (234), Expect = 7e-18, Method: Composition-based stats. Identities = 35/164 (21%), Positives = 61/164 (37%), Gaps = 25/164 (15%) Query: 52 HDEKIKALE----VIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDK----------- 96 KI AL + + A +V F L L + + R + Sbjct: 1006 SSSKIDALITRVLEMRRQDPNAKGLVFSCFVKLLE-LSQYHLKARGISTFIIHGSIPLAV 1064 Query: 97 DPCTIQEW---NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGV 153 I+ + LL ++ G GLNLQ ++ + WW+ +Q I+R Sbjct: 1065 RTRIIRAFIESPASDCSLLLVSISAGGEGLNLQRASHVFIL-DPWWNPAVEKQAIQRC-- 1121 Query: 154 TRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + G ++ V ++LI++NTI+E + K I D + Sbjct: 1122 ---HRLGQQQIVRSHHLISENTIEERIKALQEKKQLIFDGTIGG 1162 >gi|255082205|ref|XP_002508321.1| SNF2 super family [Micromonas sp. RCC299] gi|226523597|gb|ACO69579.1| SNF2 super family [Micromonas sp. RCC299] Length = 776 Score = 94.6 bits (234), Expect = 7e-18, Method: Composition-based stats. Identities = 28/157 (17%), Positives = 58/157 (36%), Gaps = 20/157 (12%) Query: 56 IKALEVIIEKANAAPIIVAYHFNSDLARLQ----------KAFPQGRTLDKDPCTIQEWN 105 +K L+ I K+ + ++ + L L+ + + +N Sbjct: 610 VKLLDEI--KSKGSRPLIFSQWKIVLDILEWVLRSRGHVFVRLDGSTDVHERQQICDAFN 667 Query: 106 EG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKR 163 +I + G GLNL G + ++ ++ + +Q +R + G R Sbjct: 668 RPGSEIFAFLLSTRAGGQGLNLT-GADTVIIHDCDFNPQIDRQAEDRC-----HRLGQTR 721 Query: 164 AVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKK 200 V V+ L+ T+DE ++Q K + +L+ K Sbjct: 722 PVTVHRLVTAGTVDERIVQIAERKLDLDAAVLSDTKA 758 >gi|158298992|ref|XP_319118.4| AGAP009980-PA [Anopheles gambiae str. PEST] gi|157014154|gb|EAA13923.4| AGAP009980-PA [Anopheles gambiae str. PEST] Length = 881 Score = 94.6 bits (234), Expect = 7e-18, Method: Composition-based stats. Identities = 23/159 (14%), Positives = 58/159 (36%), Gaps = 19/159 (11%) Query: 51 VHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQKAFP---------QGRTLDKDPC 99 K + L+ ++ K +++ F L +++ G T + Sbjct: 681 TSSGKFRQLDELLPKMKEEGHRVLIFSQFTMMLDIMERYLKIRKHGFLRLDGSTAVTERQ 740 Query: 100 TIQEW--NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 + + + + + + G G+NL +++ + ++ R Sbjct: 741 ELIDQYTQDPDLFIFLLSTKAGGLGINLTAADTVIIHD------IDFNPYNDKQAEDRAH 794 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + G K+ V +Y LI++ TI+E +L + K ++ + Sbjct: 795 RMGQKKPVTIYKLISEGTIEEGMLMIAQQKLQLEKDVTE 833 >gi|156086702|ref|XP_001610760.1| SNF2 helicase [Babesia bovis T2Bo] gi|154798013|gb|EDO07192.1| SNF2 helicase, putative [Babesia bovis] Length = 894 Score = 94.6 bits (234), Expect = 7e-18, Method: Composition-based stats. Identities = 33/224 (14%), Positives = 82/224 (36%), Gaps = 32/224 (14%) Query: 2 KQYHKFQRELYCDLQGEN----IEAFNSASKTVKCLQLANGAVYY--------DEEKHWK 49 + Y R DL E+ + + ++ + N + D Sbjct: 337 RLYKDLLRRTVPDLGAEDSHSSVVKVQLLNLAMQLRKACNHPYLFEGWEDRDADPFGEHL 396 Query: 50 EVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQ---------KAFPQGRTLDKDP 98 + K+ ++ ++ + + I++ L L+ G T ++ Sbjct: 397 VENAGKLNVVDKLLRRLLKANSRILIFSQMARMLDILEDYCRMRGYSYFRIDGNTSGEER 456 Query: 99 CT-IQEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTR 155 I +N+ ++ + + G G+NL ++++ + W+ + Q I+R Sbjct: 457 DDQISSFNDPNSEVSIFLLSTRAGGLGINL-ATADVVILYDSDWNPQVDLQAIDR----- 510 Query: 156 QRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 + G + V VY L+ + TI+E +++R K + ++ + + Sbjct: 511 AHRIGQSKTVHVYRLVHEYTIEEKIIERATIKLQLDSAVIQSGR 554 >gi|145608774|ref|XP_369873.2| hypothetical protein MGG_06388 [Magnaporthe oryzae 70-15] gi|145016204|gb|EDK00694.1| hypothetical protein MGG_06388 [Magnaporthe oryzae 70-15] Length = 1435 Score = 94.6 bits (234), Expect = 7e-18, Method: Composition-based stats. Identities = 34/225 (15%), Positives = 82/225 (36%), Gaps = 33/225 (14%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQL---ANGAVYYDEEKHWKEVHDEKIKA 58 + Y++ + + + + +QL N +DE ++ + Sbjct: 805 RLYNQMVKHQKLVVSDGKGGKTGARGLSNMIMQLRKLCNHPFVFDEVENQMNPTNTSNDL 864 Query: 59 LE------VIIEK------ANAAPIIVAYHFNSDLAR---------LQKAFPQGRTLDKD 97 L ++++ A+ +++ + + + +Q G T +D Sbjct: 865 LWRTAGKFELLDRVLPKYKASGHRVLMFFQMTAIMDIMEDFLRFRGIQYLRLDGTTKSED 924 Query: 98 PCTI-QEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 + ++N P + + G GLNLQ + ++ + W+ + Q Sbjct: 925 RSDLLYQFNRPDSPYFMFLLSTRAGGLGLNLQT-ADTVIIYDSDWNPHQDLQA-----QD 978 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 R + G K V + LI+ ++++E +L R R K + ++ A + Sbjct: 979 RAHRIGQKNEVRILRLISSSSVEEKILDRARFKLDMDGKIIQAGR 1023 >gi|30687235|ref|NP_197432.2| homeotic gene regulator, putative [Arabidopsis thaliana] gi|332005300|gb|AED92683.1| Homeotic gene regulator [Arabidopsis thaliana] Length = 1064 Score = 94.6 bits (234), Expect = 7e-18, Method: Composition-based stats. Identities = 40/190 (21%), Positives = 78/190 (41%), Gaps = 26/190 (13%) Query: 28 KTVKCLQLAN------GAVYYDEEKHWKEVHDEKIKALEVIIEKAN--AAPIIVAYHFNS 79 T++ + N GA Y +K K + L+ ++ K I++ Sbjct: 663 LTMQLRKCCNHPYLFVGADYNMCKKPEIVRASGKFELLDRLLPKLKKAGHRILLFSQMTR 722 Query: 80 DLARLQ---------KAFPQGRTL-DKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQY 127 + L+ G T D+ ++++NE P + + G GLNLQ Sbjct: 723 LIDLLEIYLSLNDYMYLRLDGSTKTDQRGILLKQFNEPDSPYFMFLLSTRAGGLGLNLQT 782 Query: 128 GGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTK 187 + ++ F W+ + QQ +R + G K+ V V+ L++ +I+E++L+R + K Sbjct: 783 -ADTIIIFDSDWNPQMDQQAEDR-----AHRIGQKKEVRVFVLVSIGSIEEVILERAKQK 836 Query: 188 STIQDLLLNA 197 I ++ A Sbjct: 837 MGIDAKVIQA 846 >gi|149639471|ref|XP_001508174.1| PREDICTED: similar to hCG32740 [Ornithorhynchus anatinus] Length = 968 Score = 94.6 bits (234), Expect = 7e-18, Method: Composition-based stats. Identities = 37/173 (21%), Positives = 67/173 (38%), Gaps = 23/173 (13%) Query: 43 DEEKHWKEVHDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAFPQGR-------- 92 D+ +WK K+ +E +++ +++ L + + F +G+ Sbjct: 467 DQFGYWKR--SGKMIVVESLLKIWHKQGHRVLLFSQSRQMLH-ILEVFLRGQKYSYLKMD 523 Query: 93 ---TLDKDPCTIQEWNEG-KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMI 148 T+ I +NE I + G G+NL G N ++ + W+ Q Sbjct: 524 GTTTIASRQPLITRYNEDTSIFVFLLTTRVGGIGVNLT-GANRVIIYDPDWNPSTDTQAR 582 Query: 149 ERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 ER + G KR V VY L+ TI+E + R K + + +L K+ Sbjct: 583 ERAW-----RIGQKRQVTVYRLLTAGTIEEKIYHRQIFKQFLTNRVLKDPKQR 630 >gi|84998504|ref|XP_953973.1| recombinational repair (RAD54 ) protein [Theileria annulata] gi|65304971|emb|CAI73296.1| recombinational repair (RAD54 homologue) protein [Theileria annulata] Length = 806 Score = 94.6 bits (234), Expect = 7e-18, Method: Composition-based stats. Identities = 30/145 (20%), Positives = 58/145 (40%), Gaps = 18/145 (12%) Query: 63 IEKANAAPIIVAYHFNSDL---ARLQK-------AFPQGRTLDKDPCTIQEWNEGKIP-- 110 I K + +++ ++ L RL K G ++ K + +N+ Sbjct: 501 IRKNSNDRVVIISNYTQTLDLFERLCKECSYPFERLDGGTSIKKRHKLVTTFNDPNSNSF 560 Query: 111 LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYL 170 + + G G+NL G N LV F W+ +Q + R+ + G + ++Y Sbjct: 561 VFLLSSKAGGCGINL-IGANRLVLFDPDWNPANDKQALARVW-----RDGQTKVCYIYRF 614 Query: 171 IAQNTIDELVLQRLRTKSTIQDLLL 195 + TI+E + QR K + +L+ Sbjct: 615 FSTGTIEEKIYQRQICKDGLSSMLV 639 >gi|330797032|ref|XP_003286567.1| hypothetical protein DICPUDRAFT_97424 [Dictyostelium purpureum] gi|325083472|gb|EGC36924.1| hypothetical protein DICPUDRAFT_97424 [Dictyostelium purpureum] Length = 1281 Score = 94.6 bits (234), Expect = 7e-18, Method: Composition-based stats. Identities = 35/160 (21%), Positives = 67/160 (41%), Gaps = 20/160 (12%) Query: 52 HDEKIKALEVIIEKANAAP--IIVAYHFNSDLARLQKAF---------PQGRTL-DKDPC 99 K ++ I+ K +A+ +++ + +++ F G T ++ Sbjct: 790 SSGKFDTMDQILTKMHASKHRVLIFTQMTEVINLMEEYFSLKEWTYLRLDGSTKPEERAH 849 Query: 100 TIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 + EWN P + + G G+NLQ + ++ F W+ + Q +R Sbjct: 850 LVVEWNRPDSPFWIFVLSTHAGGLGMNLQT-ADTVIIFDSDWNPQMDLQAQDRC-----H 903 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + G AV VY LI+ N+I+E +L+R K I ++ A Sbjct: 904 RIGQTNAVNVYRLISANSIEEKILERATDKLEIDAKIIQA 943 >gi|289619967|emb|CBI53411.1| unnamed protein product [Sordaria macrospora] Length = 1172 Score = 94.6 bits (234), Expect = 7e-18, Method: Composition-based stats. Identities = 35/144 (24%), Positives = 54/144 (37%), Gaps = 19/144 (13%) Query: 61 VIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTI--QEWNEGKIPLLFAHPAS 118 IIE F + G+T KD T+ Q N + + Sbjct: 760 DIIEA-----------FVRRQDGINYLRMDGKTPVKDRQTLVDQFNNNPDLHIFLLTTKV 808 Query: 119 CGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDE 178 G G NL G N ++ F W+ Q ER + G K+ V +Y L+ TI+E Sbjct: 809 GGLGTNLT-GANRVIIFDPDWNPSTDVQARERAW-----RLGQKKEVTIYRLMTAGTIEE 862 Query: 179 LVLQRLRTKSTIQDLLLNALKKET 202 + R K + + +L K++T Sbjct: 863 KIYHRQIFKQFLSNKVLKDPKQQT 886 >gi|169610587|ref|XP_001798712.1| hypothetical protein SNOG_08399 [Phaeosphaeria nodorum SN15] gi|160702104|gb|EAT84675.2| hypothetical protein SNOG_08399 [Phaeosphaeria nodorum SN15] Length = 1203 Score = 94.6 bits (234), Expect = 7e-18, Method: Composition-based stats. Identities = 33/163 (20%), Positives = 62/163 (38%), Gaps = 20/163 (12%) Query: 53 DEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAFP----------QGRTLDKDPCT 100 K++ ++ ++ K ++ L LQK G T K+ Sbjct: 723 SGKMQVVKELLSLWKKGGHKTLLFAQHRIMLDILQKFLDHIPEINYRRMDGETAIKNRQD 782 Query: 101 I--QEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQ 158 + + N+ + + G G+NL G N ++ + W+ Q ER + Sbjct: 783 LVDEFNNDPNLHVFLLTTKVGGLGVNLT-GANRVIIYDPDWNPSTDIQARERSW-----R 836 Query: 159 AGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 G KR V +Y L++ TI+E + R K + + +L K+ Sbjct: 837 LGQKREVEIYRLMSAGTIEEKIYHRQIFKQFLTNKVLKDPKQR 879 >gi|145503894|ref|XP_001437919.1| hypothetical protein [Paramecium tetraurelia strain d4-2] gi|124405080|emb|CAK70522.1| unnamed protein product [Paramecium tetraurelia] Length = 1741 Score = 94.6 bits (234), Expect = 7e-18, Method: Composition-based stats. Identities = 38/188 (20%), Positives = 70/188 (37%), Gaps = 42/188 (22%) Query: 45 EKHWKEVHDEKIKALEVIIEKA----------------------NAAPIIVAYHFNSDLA 82 EK H K+ AL+ I+++ N ++V F + L Sbjct: 1496 EKPDSYSHSGKMIALKDILQQLGFQSTDDAPQQQTQGDQITIYTNFNKVLVFSRFRAALQ 1555 Query: 83 RLQKAFPQGRT--------------LDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYG 128 + + + + + P + + I +L G GLNL Sbjct: 1556 LIAEQLLKTQFPGLQYLILDGSVPQTQRYPLVTKFNEDPDIRVLLLTTQVGGLGLNL-SS 1614 Query: 129 GNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKS 188 NI++ F ++ QQ ++R + G K V V+ LI ++T++E ++ R KS Sbjct: 1615 ANIVIMFDHDYNPVNDQQAMDR-----AHRIGQKNVVQVFRLIVKDTLEEKIMGIQRFKS 1669 Query: 189 TIQDLLLN 196 I ++N Sbjct: 1670 AISKAIVN 1677 >gi|115400547|ref|XP_001215862.1| conserved hypothetical protein [Aspergillus terreus NIH2624] gi|114191528|gb|EAU33228.1| conserved hypothetical protein [Aspergillus terreus NIH2624] Length = 1087 Score = 94.6 bits (234), Expect = 7e-18, Method: Composition-based stats. Identities = 30/171 (17%), Positives = 64/171 (37%), Gaps = 19/171 (11%) Query: 40 VYYDEE-KHWKEVHDEKIKALEVIIE-KANAAPIIVAYHFNSDLARLQKAFPQG------ 91 +Y + + KI+ L I+ ++ IV F S L +++ + Sbjct: 833 IYLNPGEGENDILPSTKIRHLMKILRRESADHKFIVFSVFTSMLDKIEPFLKRAGIGFAR 892 Query: 92 -----RTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 R ++ + N +L + GLNL + +V +W+ +Q Sbjct: 893 YDGGMRNDLREASLNKLRNNSGTRVLLCSLRAGALGLNLT-AASRVVILEPFWNPFVEEQ 951 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 I+R+ + V +Y LI ++T++E +L K + ++ + Sbjct: 952 AIDRV-----HRLNQTLDVKIYKLIIKDTVEERILDLQDRKRELANVTIEG 997 >gi|198428806|ref|XP_002129178.1| PREDICTED: similar to helicase, lymphoid-specific [Ciona intestinalis] Length = 936 Score = 94.6 bits (234), Expect = 8e-18, Method: Composition-based stats. Identities = 37/215 (17%), Positives = 85/215 (39%), Gaps = 29/215 (13%) Query: 8 QRELYCDLQGENIEAFNSASKTVKCLQLANGAVY--------YDEEKHWKEV--HDEKIK 57 +RE E++ + ++ ++ + N D + +E+ K++ Sbjct: 658 EREDRMTYDDESVVNVSLSNLMMQLRKCCNHPYLIKYPLIPGTDIFRVDEELISSSGKLQ 717 Query: 58 ALEVIIE--KANAAPIIVAYHFNSDLARLQ---------KAFPQGRTLDKDPCT-IQEWN 105 L+ ++ K I++ S L L+ G T + I E+N Sbjct: 718 LLDRMLPVLKKKGHKILLFSQMTSLLDILEDFCNFRNHSYVRLDGSTKCEVRQERIDEYN 777 Query: 106 -EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA 164 + + + + G G+NL + +V + W+ + Q +R + G R+ Sbjct: 778 RDPDLFIFLLSTRAGGLGINLT-SADTVVIYDSDWNPQNDLQAQDRC-----HRIGQTRS 831 Query: 165 VFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 V +Y ++ NT+D+ +++R K ++ +++N K Sbjct: 832 VLIYRFVSSNTVDQFMVERAEAKRVLERMIINRNK 866 >gi|300121668|emb|CBK22243.2| unnamed protein product [Blastocystis hominis] Length = 912 Score = 94.6 bits (234), Expect = 8e-18, Method: Composition-based stats. Identities = 28/166 (16%), Positives = 63/166 (37%), Gaps = 19/166 (11%) Query: 44 EEKHWKEVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQK----------AFPQG 91 EK + K++ L ++ + ++ + L + Sbjct: 512 PEKRLLQYDCGKLEVLSAMLPRLRQEGHRCLLFTQMSRMLDIFETFLNMHHFTYLRMDGS 571 Query: 92 RTLDKDPCTIQEWNEGK-IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 L + ++++N + + S G G+NL G + ++F+ W+ Q Sbjct: 572 TPLPQRQKMMEKFNNDNQVFVFILSTRSGGLGINL-VGADTVIFYDSDWNPAMDAQA--- 627 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 R + G R V +Y L++++T++E +L++ K + L L Sbjct: 628 --QDRAHRIGQTRDVHIYRLVSESTVEENILKKANQKRHLSQLSLE 671 >gi|50557340|ref|XP_506078.1| YALI0F31053p [Yarrowia lipolytica] gi|49651948|emb|CAG78891.1| YALI0F31053p [Yarrowia lipolytica] Length = 1869 Score = 94.6 bits (234), Expect = 8e-18, Method: Composition-based stats. Identities = 38/195 (19%), Positives = 75/195 (38%), Gaps = 20/195 (10%) Query: 16 QGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAY 75 +++ N+A K +L + + + K + E + + ++ Sbjct: 1600 GATGVKSINNAPKLQALQRLLLDCGIGETKGAEAKNGTSKKQHSEGDVPVISQHRALIFC 1659 Query: 76 HFNSDLARL-----QKAFPQGRTLDKDPCT--------IQEWN-EGKIPLLFAHPASCGH 121 L + +K P + D T +Q++N + I +L G Sbjct: 1660 QLKDMLDIVENELFKKYMPTVTFMRLDGSTEARHRHDIVQKFNADPSIDVLLLTTHVGGL 1719 Query: 122 GLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVL 181 GLNL G + ++F W+ Q ++R + G K+ V VY LI +NT++E ++ Sbjct: 1720 GLNLT-GADTVIFVEHDWNPMNDLQAMDR-----AHRIGQKKVVNVYRLITRNTLEEKIM 1773 Query: 182 QRLRTKSTIQDLLLN 196 + K I ++N Sbjct: 1774 GLQKFKLNIASTVIN 1788 >gi|300122089|emb|CBK22663.2| unnamed protein product [Blastocystis hominis] Length = 924 Score = 94.6 bits (234), Expect = 8e-18, Method: Composition-based stats. Identities = 28/166 (16%), Positives = 63/166 (37%), Gaps = 19/166 (11%) Query: 44 EEKHWKEVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQK----------AFPQG 91 EK + K++ L ++ + ++ + L + Sbjct: 512 PEKRLLQYDCGKLEVLSAMLPRLRQEGHRCLLFTQMSRMLDIFETFLNMHHFTYLRMDGS 571 Query: 92 RTLDKDPCTIQEWNEGK-IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 L + ++++N + + S G G+NL G + ++F+ W+ Q Sbjct: 572 TPLPQRQKMMEKFNNDNQVFVFILSTRSGGLGINL-VGADTVIFYDSDWNPAMDAQA--- 627 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 R + G R V +Y L++++T++E +L++ K + L L Sbjct: 628 --QDRAHRIGQTRDVHIYRLVSESTVEENILKKANQKRHLSQLSLE 671 >gi|255573018|ref|XP_002527439.1| DNA repair helicase rad5,16, putative [Ricinus communis] gi|223533174|gb|EEF34931.1| DNA repair helicase rad5,16, putative [Ricinus communis] Length = 1028 Score = 94.6 bits (234), Expect = 8e-18, Method: Composition-based stats. Identities = 34/160 (21%), Positives = 65/160 (40%), Gaps = 21/160 (13%) Query: 42 YDEEKHWKEVHDE--KIKALEVIIEKANAAPIIVAYHFNSDLARLQ----KAFPQGRTLD 95 D EK+W E ++ LE + +++ + I+ + + L LQ ++ LD Sbjct: 852 IDIEKNWVESSKVIVLLQELENL--RSSGSKSILFSQWTAFLDLLQIPLSRSGISYVRLD 909 Query: 96 ------KDPCTIQEWNEGK-IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMI 148 + I++++E I +L + G G+NL N V WW+ +Q + Sbjct: 910 GTLNQQQRERVIKQFSEDDSILVLLMSLKAGGVGINLTAASNAFVM-DPWWNPAVEEQAV 968 Query: 149 ERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKS 188 RI + G + V + I + T++E + K Sbjct: 969 MRI-----HRIGQTKPVMIKRFIVKGTVEERMEAVQARKQ 1003 >gi|146097991|ref|XP_001468285.1| DNA-dependent ATPase; transcription activator [Leishmania infantum] gi|134072652|emb|CAM71368.1| putative DNA-dependent ATPase [Leishmania infantum JPCM5] Length = 1103 Score = 94.6 bits (234), Expect = 8e-18, Method: Composition-based stats. Identities = 46/225 (20%), Positives = 81/225 (36%), Gaps = 41/225 (18%) Query: 6 KFQRELYCDLQGENIEAFN-----SASKTV---KCLQLANGAVYYDEEKH-WKEVHDEKI 56 K QRE Y ++ ++ E N AS T ++ N D + V DEK+ Sbjct: 407 KKQREWYMNVLAKDAEVLNKAGGSVASLTNVMMSLRKVINHPYLMDGGEEGPPFVTDEKL 466 Query: 57 -----------KALEVIIEKANAA-PIIVAYHFNSDLARLQ---------KAFPQGRT-- 93 K L + +++ F S L L+ G T Sbjct: 467 VRTSGKMIILDKLLHRLRADVQGKHKVLIFSQFTSMLNILEDYCNMRGFMYCRIDGNTSG 526 Query: 94 LDKDPCTIQEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERI 151 D+D + +N + + G G+NLQ N ++ + W+ + Q Sbjct: 527 YDRDSQ-MASFNSPSSDYFIFLLSTRAGGLGINLQ-AANHVILYDSDWNPQMDLQA---- 580 Query: 152 GVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 R + G KR+V VY + T++E + +R K + +++ Sbjct: 581 -QDRAHRIGQKRSVRVYRFVTDGTLEEKMYRRALKKLYLDAVVVQ 624 >gi|322502240|emb|CBZ37323.1| unnamed protein product [Leishmania donovani BPK282A1] Length = 1103 Score = 94.6 bits (234), Expect = 8e-18, Method: Composition-based stats. Identities = 46/225 (20%), Positives = 81/225 (36%), Gaps = 41/225 (18%) Query: 6 KFQRELYCDLQGENIEAFN-----SASKTV---KCLQLANGAVYYDEEKH-WKEVHDEKI 56 K QRE Y ++ ++ E N AS T ++ N D + V DEK+ Sbjct: 407 KKQREWYMNVLAKDAEVLNKAGGSVASLTNVMMSLRKVINHPYLMDGGEEGPPFVTDEKL 466 Query: 57 -----------KALEVIIEKANAA-PIIVAYHFNSDLARLQ---------KAFPQGRT-- 93 K L + +++ F S L L+ G T Sbjct: 467 VRTSGKMIILDKLLHRLRADVQGKHKVLIFSQFTSMLNILEDYCNMRGFMYCRIDGNTSG 526 Query: 94 LDKDPCTIQEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERI 151 D+D + +N + + G G+NLQ N ++ + W+ + Q Sbjct: 527 YDRDSQ-MASFNSPSSDYFIFLLSTRAGGLGINLQ-AANHVILYDSDWNPQMDLQA---- 580 Query: 152 GVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 R + G KR+V VY + T++E + +R K + +++ Sbjct: 581 -QDRAHRIGQKRSVRVYRFVTDGTLEEKMYRRALKKLYLDAVVVQ 624 >gi|307776522|pdb|3MWY|W Chain W, Crystal Structure Of The Chromodomain-Atpase Portion Of The Yeast Chd1 Chromatin Remodeler Length = 800 Score = 94.6 bits (234), Expect = 8e-18, Method: Composition-based stats. Identities = 28/159 (17%), Positives = 62/159 (38%), Gaps = 20/159 (12%) Query: 52 HDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARL----------QKAFPQGRTLDKDPC 99 K+ L+ ++ + + +++ L L + + Sbjct: 554 SSGKMVLLDQLLTRLKKDGHRVLIFSQMVRMLDILGDYLSIKGINFQRLDGTVPSAQRRI 613 Query: 100 TIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 +I +N + + G G+NL + +V F W+ + Q + R Sbjct: 614 SIDHFNSPDSNDFVFLLSTRAGGLGINLMT-ADTVVIFDSDWNPQADLQAMAR-----AH 667 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + G K V VY L++++T++E VL+R R K ++ +++ Sbjct: 668 RIGQKNHVMVYRLVSKDTVEEEVLERARKKMILEYAIIS 706 >gi|71022165|ref|XP_761313.1| hypothetical protein UM05166.1 [Ustilago maydis 521] gi|46097807|gb|EAK83040.1| hypothetical protein UM05166.1 [Ustilago maydis 521] Length = 1106 Score = 94.6 bits (234), Expect = 8e-18, Method: Composition-based stats. Identities = 33/155 (21%), Positives = 60/155 (38%), Gaps = 19/155 (12%) Query: 53 DEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFP---------QGRTLDKDPCTI 101 KI+AL+ +I + A I++ F L L G T +D + Sbjct: 916 SGKIQALQRLIPEIQAKGDRILIFSQFTMVLDILCVCLQHMGVKYVGFTGSTQVQDRQVL 975 Query: 102 QEW--NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQA 159 + N+ I + + G G+NL N ++ F ++ +Q +R + Sbjct: 976 VDQFTNDASITVFLLSTKAGGLGINL-IAANWVILFDQDFNPHNDKQAADR-----SYRM 1029 Query: 160 GFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 G + V V L+++ TIDE + K + D + Sbjct: 1030 GQTKPVTVVKLLSRGTIDEDIHALGERKLQLADRV 1064 >gi|241809906|ref|XP_002414557.1| helicase, putative [Ixodes scapularis] gi|215508768|gb|EEC18222.1| helicase, putative [Ixodes scapularis] Length = 790 Score = 94.2 bits (233), Expect = 8e-18, Method: Composition-based stats. Identities = 30/144 (20%), Positives = 63/144 (43%), Gaps = 18/144 (12%) Query: 65 KANAAPIIVAYHFNSDLARLQ---------KAFPQGRTLDKDPC-TIQEWNEG--KIPLL 112 KA + ++V L L+ G+T ++ +I E+N + L Sbjct: 224 KAQGSRVLVFSQMTRMLDILEDYCLWRRYGYCRLDGQTPHEERTLSINEFNRPGSEKFLF 283 Query: 113 FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIA 172 + G G+NL ++++ F W+ + Q ++R + G +AV V+ LI Sbjct: 284 MLSTRAGGLGINL-ATADVVILFDSDWNPQVDLQAMDR-----AHRIGQTKAVRVFRLIT 337 Query: 173 QNTIDELVLQRLRTKSTIQDLLLN 196 +NT++E +++R K + +++ Sbjct: 338 ENTVEERIVERAEVKLRLDTVVIQ 361 >gi|170587941|ref|XP_001898732.1| SNF2 family N-terminal domain containing protein [Brugia malayi] gi|158592945|gb|EDP31540.1| SNF2 family N-terminal domain containing protein [Brugia malayi] Length = 798 Score = 94.2 bits (233), Expect = 8e-18, Method: Composition-based stats. Identities = 32/152 (21%), Positives = 63/152 (41%), Gaps = 21/152 (13%) Query: 61 VIIEKANAAPIIVAYHFNSDLARLQKAFPQGRT--------------LDKDPCTIQEWN- 105 I + N ++ S + L F G +++ +++N Sbjct: 536 EISQTGNGHRALIFCQRLSAVQLLVNLFSSGELGSDIRFAVLDGTVPVNERHAVAEKFNV 595 Query: 106 EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 + I +L G GLNL G +I++F W+ + Q ++R + G K AV Sbjct: 596 DPSIHVLILTTNIGGEGLNLT-GADIVIFLEHDWNPVKDLQAMDR-----AHRIGQKCAV 649 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 VY LI + +I++ +++ + K+ + L+ A Sbjct: 650 NVYRLITEGSIEQKIMRLQKFKTDTANALVGA 681 >gi|308813301|ref|XP_003083957.1| Swi2/Snf2-related protein DDM1; decrease in DNA methylation 1; CHR1 (ISS) [Ostreococcus tauri] gi|116055839|emb|CAL57924.1| Swi2/Snf2-related protein DDM1; decrease in DNA methylation 1; CHR1 (ISS) [Ostreococcus tauri] Length = 708 Score = 94.2 bits (233), Expect = 8e-18, Method: Composition-based stats. Identities = 27/156 (17%), Positives = 65/156 (41%), Gaps = 19/156 (12%) Query: 55 KIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAFPQGRT----------LDKDPCTIQ 102 K++ L+ +++ +A ++V L L+ F Q D I Sbjct: 473 KMQLLDRLMKKLRARGHKVLVFSQMTRMLDLLESYFQQRGENVCRIDGSVKQDDRREFIA 532 Query: 103 EWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGF 161 ++N + + + G G+NL G+ ++ + W+ + Q ++R+ + G Sbjct: 533 KFNTDPDYGIFLLSTRAGGLGINLT-AGDTVIIYDSDWNPHQDLQAMDRV-----HRIGQ 586 Query: 162 KRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + V VY L +++ +L++ +K ++ L++ Sbjct: 587 TKPVHVYRLATAKSVEGKMLKKAASKLALEKLVVTG 622 >gi|149209815|ref|XP_001522282.1| hypothetical protein MGCH7_ch7g389 [Magnaporthe oryzae 70-15] gi|86196344|gb|EAQ70982.1| hypothetical protein MGCH7_ch7g389 [Magnaporthe oryzae 70-15] Length = 2047 Score = 94.2 bits (233), Expect = 8e-18, Method: Composition-based stats. Identities = 36/196 (18%), Positives = 73/196 (37%), Gaps = 24/196 (12%) Query: 9 RELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANA 68 R+ Y D +N +++K KC QL + E+ V + LEV I Sbjct: 1852 RKRYFDYLDDNWI---TSAKISKCTQLLSEIRQKGEKTLIFSVFTSLLDLLEVGI----- 1903 Query: 69 APIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQY 127 DL + D +Q++ ++ + GLNL Sbjct: 1904 ---------RHDLGLRVCRYDGSLGRDARDKAVQDFQFNPNATIMLVSLRAGNAGLNLTA 1954 Query: 128 GGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTK 187 +++ +W+ Q ++R + G R+V V L+ + T+++ +++ K Sbjct: 1955 ASQVIIM-DPFWNPYIEMQAVDR-----AHRMGQLRSVHVQRLVVKETVEDRIIKLQEQK 2008 Query: 188 STIQDLLLNALKKETI 203 T+ + LN + + + Sbjct: 2009 RTLVEAALNGDEAKNL 2024 >gi|242078375|ref|XP_002443956.1| hypothetical protein SORBIDRAFT_07g005035 [Sorghum bicolor] gi|241940306|gb|EES13451.1| hypothetical protein SORBIDRAFT_07g005035 [Sorghum bicolor] Length = 166 Score = 94.2 bits (233), Expect = 8e-18, Method: Composition-based stats. Identities = 26/130 (20%), Positives = 52/130 (40%), Gaps = 17/130 (13%) Query: 72 IVAYHFNSDLARLQKAF----PQGRTLDKD------PCTIQEWN-EGKIPLLFAHPASCG 120 IV + L L+ + Q R LD ++++N + ++ ++ + Sbjct: 15 IVFSQWTGMLDLLENSLNTNLIQYRRLDGTMSLNLRDKAVKDFNTDPEVRVMIMSLKAGN 74 Query: 121 HGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELV 180 GLN+ ++ LWW+ Q I+R + G R V V L ++T+++ + Sbjct: 75 LGLNM-VAACHVILLDLWWNPYAEDQAIDR-----AHRIGQTRPVTVSRLTVKDTVEDRI 128 Query: 181 LQRLRTKSTI 190 L K + Sbjct: 129 LALQEEKRAM 138 >gi|317142811|ref|XP_001819108.2| SNF2 family helicase/ATPase [Aspergillus oryzae RIB40] Length = 1137 Score = 94.2 bits (233), Expect = 8e-18, Method: Composition-based stats. Identities = 31/171 (18%), Positives = 67/171 (39%), Gaps = 19/171 (11%) Query: 40 VYYDEEKHWKEV-HDEKIKALEVIIE-KANAAPIIVAYHFNSDLARLQ----------KA 87 +Y + +V KI+ L I+ +++ IV F S L +++ Sbjct: 883 IYLNPGDEDNQVLPSTKIRHLMKILRRESSDYKFIVFSVFTSMLDKIEPFLQRAGIGFAR 942 Query: 88 FPQGRTLDKDPCTIQEW-NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 + G D ++ + N +L + GLNL + +V +W+ +Q Sbjct: 943 YDGGMRNDLREASLNKLRNNSGTRVLLCSLRAGALGLNLT-AASRVVILEPFWNPFVEEQ 1001 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 I+R+ + V +Y LI ++T++E ++ K + ++ + Sbjct: 1002 AIDRV-----HRLNQTVDVKIYKLIIKDTVEERIIDLQERKRELANVTIEG 1047 >gi|296825556|ref|XP_002850834.1| transcriptional accessory protein [Arthroderma otae CBS 113480] gi|238838388|gb|EEQ28050.1| transcriptional accessory protein [Arthroderma otae CBS 113480] Length = 1905 Score = 94.2 bits (233), Expect = 8e-18, Method: Composition-based stats. Identities = 34/164 (20%), Positives = 67/164 (40%), Gaps = 18/164 (10%) Query: 34 QLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRT 93 +LA GA Y + ++K + I++ ++ + F Sbjct: 1675 ELATGASYVSPHRALIF---CQMKEMLDIVQNDVLRKLLPSVQFL--------RLDGSVE 1723 Query: 94 LDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIG 152 K + ++N + +L + G GLNL G + ++F W+ ++ Q ++R Sbjct: 1724 ATKRQNIVNQFNTDPSYDVLLLTTSVGGLGLNLT-GADTVIFVEHDWNPQKDIQAMDR-- 1780 Query: 153 VTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + G K+ V VY LI + T++E +L R K + ++N Sbjct: 1781 ---AHRIGQKKVVNVYRLITRGTLEEKILNLQRFKIDVTSTVVN 1821 >gi|169616788|ref|XP_001801809.1| hypothetical protein SNOG_11569 [Phaeosphaeria nodorum SN15] gi|160703265|gb|EAT81277.2| hypothetical protein SNOG_11569 [Phaeosphaeria nodorum SN15] Length = 1535 Score = 94.2 bits (233), Expect = 8e-18, Method: Composition-based stats. Identities = 29/166 (17%), Positives = 65/166 (39%), Gaps = 19/166 (11%) Query: 44 EEKHWKEVHDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAF---------PQGR 92 +K + K++ L ++ +A ++ L L++ G Sbjct: 1220 PDKRLLQYDCGKLQRLATLLRDLQAGGHRALIFTQMTKVLDVLEQFLNIHGHRYLRLDGS 1279 Query: 93 TLDKDPCTI-QEWNEGK-IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 T + + +N I S G G+NL G + ++F+ L W+ +++ Sbjct: 1280 TKVEQRQILTDRFNSDDRILCFILSSRSGGLGINLT-GADTVIFYDLDWN-----PAMDK 1333 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 R + G R V +Y +++ TI+ +L++ K + D+++ Sbjct: 1334 QCQDRAHRIGQTRDVHIYKFVSEYTIEANILRKSNQKRLLDDVIIQ 1379 >gi|90399293|emb|CAH68165.1| H0323C08.5 [Oryza sativa Indica Group] gi|116312065|emb|CAJ86429.1| H0303G06.18 [Oryza sativa Indica Group] Length = 1051 Score = 94.2 bits (233), Expect = 8e-18, Method: Composition-based stats. Identities = 24/149 (16%), Positives = 57/149 (38%), Gaps = 18/149 (12%) Query: 57 KALEVIIEKANAAPIIVAYHFN---------SDLARLQ-KAFPQGRTLDKDPCTIQEWN- 105 +E + + IV + D +R++ + +L+ ++E+N Sbjct: 885 DTMESSPSEVAPSKAIVFSQWTGLLDLLELSLDSSRIKFRRLDGAMSLNLREAAVREFNT 944 Query: 106 EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 + ++ ++ + GLN+ ++ WW+ Q ++R + G R V Sbjct: 945 DPEVRVMLMSLKAGNLGLNM-VAACHVIMIDPWWNPYAEDQAVDR-----AHRIGQTRPV 998 Query: 166 FVYYLIAQNTIDELVLQRLRTKST-IQDL 193 V L ++T+++ +L K +Q Sbjct: 999 TVSRLTIKDTVEDRILALQEKKRKMVQSA 1027 >gi|119495345|ref|XP_001264459.1| SNF2 family helicase/ATPase PasG, putative [Neosartorya fischeri NRRL 181] gi|119412621|gb|EAW22562.1| SNF2 family helicase/ATPase PasG, putative [Neosartorya fischeri NRRL 181] Length = 867 Score = 94.2 bits (233), Expect = 9e-18, Method: Composition-based stats. Identities = 26/145 (17%), Positives = 55/145 (37%), Gaps = 18/145 (12%) Query: 67 NAAPIIVAYHFNSDLARLQK----------AFPQGRTLDKDPCT-IQEWNEGK-IPLLFA 114 I++ F + L LQ G D I+ +N + Sbjct: 640 KGHKILIFSQFKTQLDILQDWATQLRGWNCCRIDGAISQTDRQAQIKAFNSDTGYKIFLL 699 Query: 115 HPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQN 174 + G G+NL + ++ + W+ ++ Q R + G + V VY L + Sbjct: 700 STRAGGQGINL-VAADTVILYDSDWNPQQDLQA-----QDRAHRIGQTKPVIVYRLATKG 753 Query: 175 TIDELVLQRLRTKSTIQDLLLNALK 199 T+++ +L++ +K ++ L++ K Sbjct: 754 TVEQTLLEKADSKRRLERLVIQKGK 778 >gi|115460732|ref|NP_001053966.1| Os04g0629300 [Oryza sativa Japonica Group] gi|39546244|emb|CAE04253.3| OSJNBa0089N06.14 [Oryza sativa Japonica Group] gi|113565537|dbj|BAF15880.1| Os04g0629300 [Oryza sativa Japonica Group] gi|125549851|gb|EAY95673.1| hypothetical protein OsI_17539 [Oryza sativa Indica Group] gi|125591732|gb|EAZ32082.1| hypothetical protein OsJ_16271 [Oryza sativa Japonica Group] gi|215717116|dbj|BAG95479.1| unnamed protein product [Oryza sativa Japonica Group] Length = 1051 Score = 94.2 bits (233), Expect = 9e-18, Method: Composition-based stats. Identities = 24/149 (16%), Positives = 57/149 (38%), Gaps = 18/149 (12%) Query: 57 KALEVIIEKANAAPIIVAYHFN---------SDLARLQ-KAFPQGRTLDKDPCTIQEWN- 105 +E + + IV + D +R++ + +L+ ++E+N Sbjct: 885 DTMESSPSEVAPSKAIVFSQWTGLLDLLELSLDSSRIKFRRLDGAMSLNLREAAVREFNT 944 Query: 106 EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 + ++ ++ + GLN+ ++ WW+ Q ++R + G R V Sbjct: 945 DPEVRVMLMSLKAGNLGLNM-VAACHVIMIDPWWNPYAEDQAVDR-----AHRIGQTRPV 998 Query: 166 FVYYLIAQNTIDELVLQRLRTKST-IQDL 193 V L ++T+++ +L K +Q Sbjct: 999 TVSRLTIKDTVEDRILALQEKKRKMVQSA 1027 >gi|289769357|ref|ZP_06528735.1| conserved hypothetical protein [Streptomyces lividans TK24] gi|289699556|gb|EFD66985.1| conserved hypothetical protein [Streptomyces lividans TK24] Length = 767 Score = 94.2 bits (233), Expect = 9e-18, Method: Composition-based stats. Identities = 39/197 (19%), Positives = 78/197 (39%), Gaps = 30/197 (15%) Query: 14 DLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKA--NAAPI 71 +L + EA+ A + + + A + K++ L I+++A N Sbjct: 514 ELSASDEEAYREAVRAGNFMAMRRAAYMS-------SGNSAKLERLREIVQEAGENGQKT 566 Query: 72 IVAYHFNSDLARLQKAFP--------------QGRTLDKDPCTIQEWNEGKIP-LLFAHP 116 +V +F LA +++A G + + ++ + P +L Sbjct: 567 VVFSNFKDVLAVVKEALAVETTRVTPVFGPLTGGVPAQRRQEIVDDFAGVQGPAVLLGQI 626 Query: 117 ASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTI 176 + G GLN+Q +++V + + IE V R + G R V V+ L+A + Sbjct: 627 QAAGVGLNMQ-AASVVVICEP-----QIKPTIEHQAVARAHRMGQVRPVRVHRLLATGGV 680 Query: 177 DELVLQRLRTKSTIQDL 193 DE +++ L K+ + D Sbjct: 681 DERMVKMLEAKTRLFDA 697 >gi|50293735|ref|XP_449279.1| hypothetical protein [Candida glabrata CBS 138] gi|49528592|emb|CAG62253.1| unnamed protein product [Candida glabrata] Length = 1476 Score = 94.2 bits (233), Expect = 9e-18, Method: Composition-based stats. Identities = 27/159 (16%), Positives = 62/159 (38%), Gaps = 20/159 (12%) Query: 52 HDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARL----------QKAFPQGRTLDKDPC 99 K+ L+ ++ + + +++ L L + ++ Sbjct: 708 SSGKMVLLDKLLTRLKKDGHRVLIFSQMVRILDILGDYLSIKGINFQRLDGTVPSNQRRI 767 Query: 100 TIQEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 I +N + + G G+NL + ++ F W+ + Q + R Sbjct: 768 AIDHFNAPGSDDFVFLLSTRAGGLGINLMT-ADTVIIFDSDWNPQADLQAMAR-----AH 821 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + G K V VY L++++T++E VL+R R K ++ +++ Sbjct: 822 RIGQKNHVMVYRLVSKDTVEEEVLERARKKMILEYAIIS 860 >gi|145610193|ref|XP_001410153.1| hypothetical protein MGG_12631 [Magnaporthe oryzae 70-15] gi|145017551|gb|EDK01914.1| hypothetical protein MGG_12631 [Magnaporthe oryzae 70-15] Length = 1334 Score = 94.2 bits (233), Expect = 9e-18, Method: Composition-based stats. Identities = 36/196 (18%), Positives = 73/196 (37%), Gaps = 24/196 (12%) Query: 9 RELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANA 68 R+ Y D +N +++K KC QL + E+ V + LEV I Sbjct: 1139 RKRYFDYLDDNWI---TSAKISKCTQLLSEIRQKGEKTLIFSVFTSLLDLLEVGI----- 1190 Query: 69 APIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQY 127 DL + D +Q++ ++ + GLNL Sbjct: 1191 ---------RHDLGLRVCRYDGSLGRDARDKAVQDFQFNPNATIMLVSLRAGNAGLNLTA 1241 Query: 128 GGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTK 187 +++ +W+ Q ++R + G R+V V L+ + T+++ +++ K Sbjct: 1242 ASQVIIM-DPFWNPYIEMQAVDR-----AHRMGQLRSVHVQRLVVKETVEDRIIKLQEQK 1295 Query: 188 STIQDLLLNALKKETI 203 T+ + LN + + + Sbjct: 1296 RTLVEAALNGDEAKNL 1311 >gi|68483984|ref|XP_714082.1| hypothetical protein CaO19.11916 [Candida albicans SC5314] gi|68484390|ref|XP_713881.1| hypothetical protein CaO19.4437 [Candida albicans SC5314] gi|46435400|gb|EAK94782.1| hypothetical protein CaO19.4437 [Candida albicans SC5314] gi|46435612|gb|EAK94990.1| hypothetical protein CaO19.11916 [Candida albicans SC5314] Length = 859 Score = 94.2 bits (233), Expect = 9e-18, Method: Composition-based stats. Identities = 43/225 (19%), Positives = 87/225 (38%), Gaps = 43/225 (19%) Query: 7 FQRELYCDLQGENIEAFNSAS--------KTVKCLQLAN-------------GAVYYDEE 45 Q+ LY + ++I+A N A+ +QL G Y +E Sbjct: 216 MQKNLYQKILEKDIDAVNGANGKKESKTRLLNIVMQLRKCCNHPYLFEGVEPGPPYTTDE 275 Query: 46 KHWKEVHDEKIKALEVIIE--KANAAPIIVAYHFNSDLARL---------QKAFPQGRTL 94 + +K+ L+ +++ + + +++ + L L Q G+T Sbjct: 276 HLV--YNSQKMLILDQLLKKFQQEGSRVLIFSQMSRMLDILEDYCYFREYQYCRIDGQTE 333 Query: 95 DKDP-CTIQEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERI 151 D I E+N+ + + + G G+NL +I++ F W+ + Q ++R Sbjct: 334 HSDRINAIDEYNKPGSEKFIFLLTTRAGGLGINLT-SADIVILFDSDWNPQADLQAMDR- 391 Query: 152 GVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + G + V V+ I + I+E VL+R K + L++ Sbjct: 392 ----AHRIGQTKQVKVFRFITERAIEEKVLERAAQKLRLDQLVIQ 432 >gi|320588259|gb|EFX00734.1| snf2 family helicase [Grosmannia clavigera kw1407] Length = 1741 Score = 94.2 bits (233), Expect = 9e-18, Method: Composition-based stats. Identities = 37/203 (18%), Positives = 75/203 (36%), Gaps = 24/203 (11%) Query: 6 KFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEK 65 + +R+ + A + K L + D H K+ L I+++ Sbjct: 1189 QRERDAHHPSSASPYSATLPLAVVQKLLSIGQKRNIDDLH------HSSKVMVLMGILDE 1242 Query: 66 A--NAAPIIVAYHFNSDLARLQKAFPQGRTLDKD----------PCTIQEWNEGKIPLLF 113 A +++ L L+ F + + ++ +N G+ + Sbjct: 1243 AREAGDKVLIFSQSKLVLDYLEDVFQRKKRRYSRLDGDTVVRWRQGMVKSFNAGRDEIYL 1302 Query: 114 AHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQ 173 + G GLN+ +G N +V F W+ QQ I R + G + VFVY+LI Sbjct: 1303 ISTTAGGVGLNI-HGANRVVIFDFKWNPMHEQQAIGR-----AYRIGQTKPVFVYWLITG 1356 Query: 174 NTIDELVLQRLRTKSTIQDLLLN 196 T + ++ + K+ + +++ Sbjct: 1357 GTFETVLHDQAVFKTQLASRVVD 1379 >gi|213408333|ref|XP_002174937.1| ATP-dependent DNA helicase Snf22 [Schizosaccharomyces japonicus yFS275] gi|212002984|gb|EEB08644.1| ATP-dependent DNA helicase Snf22 [Schizosaccharomyces japonicus yFS275] Length = 1489 Score = 94.2 bits (233), Expect = 9e-18, Method: Composition-based stats. Identities = 32/226 (14%), Positives = 76/226 (33%), Gaps = 33/226 (14%) Query: 1 MKQYHKFQRELYCDLQGENIEAFNSASKTVKCLQL---ANGAVYYDEEKHWKEVHDEKIK 57 ++ Y + ++ + +QL N ++E + + Sbjct: 923 LRLYQQMKKHGILFVADGEKGRTGMKGLQNTVMQLKKICNHPFVFEEVEQAIDPEGTNYD 982 Query: 58 ALE------VIIEKA------NAAPIIVAYHFNSDLARL---------QKAFPQGRTLDK 96 L ++++ ++ + ++ + + G T + Sbjct: 983 LLWRAAGKFELLDRVLPKLFRTGHRTLIFFQMTQIMSIMEDYLRYRNWKYLRLDGSTKAE 1042 Query: 97 DPCTI-QEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGV 153 D + ++N+ I + + G GLNLQ + ++ F W+ + Q Sbjct: 1043 DRSALLADFNDRNSDIYVFLLSTRAGGLGLNLQT-ADTVIIFDTDWNPHQDLQA-----Q 1096 Query: 154 TRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 R + G + V + LI +I+E +L R + K + ++ A K Sbjct: 1097 DRAHRIGQTKEVRILRLITDKSIEENILARAQYKLDLDGKVIQAGK 1142 >gi|294656125|ref|XP_002770225.1| DEHA2C15774p [Debaryomyces hansenii CBS767] gi|199430877|emb|CAR65588.1| DEHA2C15774p [Debaryomyces hansenii] Length = 1100 Score = 94.2 bits (233), Expect = 9e-18, Method: Composition-based stats. Identities = 36/157 (22%), Positives = 66/157 (42%), Gaps = 19/157 (12%) Query: 51 VHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAF---------PQGRT-LDKDP 98 ++ KI L I++K +++ F L L+K G+T +D Sbjct: 925 LNGGKISKLIEILDKIINKKEKVLIFSLFTQMLDILEKVLTISNMKFLRLDGQTSVDTRQ 984 Query: 99 CTIQEWNEGK-IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 I ++ + + IP+ + G G+NL N ++ F ++ + +Q +R Sbjct: 985 DLIDKFYDDETIPVFLLSTKAGGFGINL-VAANHVIIFDQSFNPHDDKQAEDR-----AH 1038 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 + G V V LIA+NTI+E +LQ K + + Sbjct: 1039 RVGQTSEVVVTKLIAKNTIEENMLQLAENKLQLDQSI 1075 >gi|126522468|gb|AAI32448.1| Ercc6 protein [Mus musculus] Length = 1157 Score = 94.2 bits (233), Expect = 9e-18, Method: Composition-based stats. Identities = 34/169 (20%), Positives = 62/169 (36%), Gaps = 21/169 (12%) Query: 46 KHWKEVHDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQK----------AFPQGRT 93 HW+ K+ +E +++ +++ L L+ T Sbjct: 505 GHWRR--SGKMIVVESLLKIWHRQGQRVLLFSQSRQMLHILEVFLRAHKYSYLKMDGTTT 562 Query: 94 LDKDPCTIQEWNEG-KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIG 152 + I ++NE I + G G+NL G N ++ + W+ Q ER Sbjct: 563 IASRQPLITKYNEDTSIFVFLLTTRVGGLGVNLT-GANRVIIYDPDWNPSTDTQARERAW 621 Query: 153 VTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 + G K+ V VY L+ TI+E + R K + + +L K+ Sbjct: 622 -----RIGQKKQVTVYRLLTAGTIEEKIYHRQIFKQFLTNRVLKDPKQR 665 >gi|251773066|gb|EES53622.1| DNA/RNA helicase, SNF2 family [Leptospirillum ferrodiazotrophum] Length = 824 Score = 94.2 bits (233), Expect = 9e-18, Method: Composition-based stats. Identities = 36/183 (19%), Positives = 76/183 (41%), Gaps = 18/183 (9%) Query: 26 ASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFN--SDL-- 81 + +++ +++ + Y + + V +++ AL + +V + D+ Sbjct: 498 LTCSLQNMRMVCNSTYLIDPETDHGVKADELVALLDGLFSDPGTKAVVFSQWTRTHDIVI 557 Query: 82 ARLQKA------FPQGRTLDKDPCTIQEW-NEGKIPLLFAHPASCGHGLNLQYGGNILVF 134 RL F G D+ P ++ + + + + GLNLQ+ ++LV Sbjct: 558 RRLDARGIGSVSFHGGIPSDRRPALVERFREDPDCRVFL-STDAGSTGLNLQH-ASVLVN 615 Query: 135 FSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 L W+ +Q I RI + G KR V + +A+ I+E +L L K ++ + + Sbjct: 616 MDLPWNPAILEQRIARI-----HRMGQKRPVQIVNFVAKGGIEEGMLGLLSFKQSLSEGI 670 Query: 195 LNA 197 L+ Sbjct: 671 LDG 673 >gi|255541128|ref|XP_002511628.1| helicase, putative [Ricinus communis] gi|223548808|gb|EEF50297.1| helicase, putative [Ricinus communis] Length = 860 Score = 94.2 bits (233), Expect = 9e-18, Method: Composition-based stats. Identities = 42/234 (17%), Positives = 85/234 (36%), Gaps = 37/234 (15%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQL--ANGAVY---------YDEEKHWKE 50 + Y R+ L + A N S +QL A Y Y+E +H + Sbjct: 303 RVYMSILRKELPKLLALSSAASNHQSLQNIVIQLRKACSHPYLFPGIEPEPYEEGEHLVQ 362 Query: 51 VHDEKIKALEVIIEKANA--APIIVAYHFNSDLARLQKAFPQGR----TLDKDPCTIQEW 104 K+ L+ +++K + +I+ L LQ + LD + + Sbjct: 363 -ASGKLIILDQLLKKLHGSGHRVIIFAQMTHTLDILQDFLELRKYSYERLDGSIRAEERF 421 Query: 105 --------NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 + + G GLNL + ++F+ W+ + +Q ++R Sbjct: 422 AAIRSFSGQAMNAFVFMISTRAGGVGLNL-VAADTVIFYEQDWNPQVDKQAVQR-----A 475 Query: 157 RQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQ-----DLLLNALKKETIHV 205 + G V L+ ++T++E++++R K + D ++ KE + V Sbjct: 476 HRIGQMNHVLSINLVTRHTVEEVIMRRAEKKLQLSNNVLGDDVMEQKGKEPVGV 529 >gi|242207274|ref|XP_002469491.1| predicted protein [Postia placenta Mad-698-R] gi|220731520|gb|EED85364.1| predicted protein [Postia placenta Mad-698-R] Length = 1300 Score = 94.2 bits (233), Expect = 9e-18, Method: Composition-based stats. Identities = 30/155 (19%), Positives = 69/155 (44%), Gaps = 19/155 (12%) Query: 55 KIKALEVIIEK--ANAAPIIVAYHFNSDLARLQ---------KAFPQGRTLDKDPCTI-Q 102 K++ L ++ + A I++ L L+ G T +D I + Sbjct: 1097 KLQELARLLRERKAGGHRILIFTQMTKILDILEIFLNLHGYLYLRLDGATKIEDRQYITE 1156 Query: 103 EWNEG-KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGF 161 +N +I + S G G+NL G + ++F+ ++ + ++R R + G Sbjct: 1157 RFNSDSRIFCFISSSRSGGVGINLT-GADTVIFYDSDFNPQ-----MDRQCEDRAHRIGQ 1210 Query: 162 KRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 R V +Y I+++T++E +L++ K ++ ++++ Sbjct: 1211 IRDVHIYRFISEHTVEEALLRKANQKRSLDNIVIQ 1245 >gi|225432582|ref|XP_002281240.1| PREDICTED: hypothetical protein [Vitis vinifera] Length = 1103 Score = 94.2 bits (233), Expect = 9e-18, Method: Composition-based stats. Identities = 33/190 (17%), Positives = 79/190 (41%), Gaps = 26/190 (13%) Query: 28 KTVKCLQLANGA-VYYDEEKHWKEV-----HDEKIKALEVIIEKAN--AAPIIVAYHFNS 79 +++ + N ++ + W++ K + L+ ++ K +++ Sbjct: 678 LSMQLRKCCNHPYLFVGDYNIWQKKEEMVRASGKFELLDRLLPKLQKAGHRVLLFSQMTR 737 Query: 80 DLA---------RLQKAFPQGRTLDKDPCT-IQEWNEGKIP--LLFAHPASCGHGLNLQY 127 + ++ G T ++ T ++++N P + + G GLNLQ Sbjct: 738 LMDILEIYLQMNEIKYLRLDGSTKTEERGTKLKQFNAPDSPYFMFLLSTRAGGLGLNLQT 797 Query: 128 GGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTK 187 + ++ F W+ + QQ +R + G K+ V V+ L++ +I+E++L+R + K Sbjct: 798 -ADTVIIFDSDWNPQMDQQAEDR-----AHRIGQKKEVRVFVLVSVGSIEEVILERAKQK 851 Query: 188 STIQDLLLNA 197 I ++ A Sbjct: 852 MGIDAKVIQA 861 >gi|289618348|emb|CBI55072.1| unnamed protein product [Sordaria macrospora] Length = 972 Score = 94.2 bits (233), Expect = 9e-18, Method: Composition-based stats. Identities = 36/163 (22%), Positives = 61/163 (37%), Gaps = 21/163 (12%) Query: 43 DEEKHWKEVHDEKIKALEVIIEKANAA----PIIVAYHFNSDLARLQKAFPQGR------ 92 DEE+ E K A+ +++ + +I+ + S L +Q + Sbjct: 788 DEEELESETKSSKTDAVLRLVKDSLGKDAGNKVIIFSQWTSFLTIIQHQLDEAGYTYTRI 847 Query: 93 -----TLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQM 147 T +D + +L A C GLNL N ++ WW Q Sbjct: 848 DGSMNTAQRDAAIRALDYDPNTRILLASLGVCSVGLNL-VSANTVILADSWWAPAIEDQA 906 Query: 148 IERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 ++R+ + G R VY L+ +NTI+E VL + K + Sbjct: 907 VDRV-----HRLGQTRETNVYRLVMENTIEERVLDIQKEKREL 944 >gi|169621462|ref|XP_001804141.1| hypothetical protein SNOG_13941 [Phaeosphaeria nodorum SN15] gi|160704260|gb|EAT78566.2| hypothetical protein SNOG_13941 [Phaeosphaeria nodorum SN15] Length = 1274 Score = 94.2 bits (233), Expect = 9e-18, Method: Composition-based stats. Identities = 27/168 (16%), Positives = 58/168 (34%), Gaps = 26/168 (15%) Query: 52 HDEKIKALEVIIE---KANAAPIIVAYHFNSDLARLQK---------------AFPQGRT 93 K LE +I+ +++ F L + F Sbjct: 666 ASGKFILLEKLIKHTVMNQGKKVLIFSGFTRTLDYTEDLLSLISNHGRDFKHLRFDGSTA 725 Query: 94 LDKDPCTIQEWN--EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERI 151 K I+ +N ++ + G G+NL + ++F W+ + Q R Sbjct: 726 RAKRNLDIRLFNQESSDYKVMLLSTRAGGLGINLTSAQD-VIFLDEDWNPQITLQAEAR- 783 Query: 152 GVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 + G + V +Y + Q T++E ++ R+R K + + +++ Sbjct: 784 ----AHRIGQTKKVTIYKICTQGTVEEQMMGRIRKKLYLSAKITESMR 827 >gi|115623606|ref|XP_786706.2| PREDICTED: hypothetical protein [Strongylocentrotus purpuratus] gi|115939608|ref|XP_001193343.1| PREDICTED: hypothetical protein [Strongylocentrotus purpuratus] Length = 1093 Score = 94.2 bits (233), Expect = 9e-18, Method: Composition-based stats. Identities = 33/166 (19%), Positives = 61/166 (36%), Gaps = 25/166 (15%) Query: 42 YDEEKHWKEVHDEKIKALEV--IIEKANAA--PIIVAYHFNSDLARLQK----------A 87 D ++ W K+ AL + E+A IV F S L L+K Sbjct: 902 DDTDREWH--SSAKVDALMECLLTERAADKTTKSIVVSQFTSFLDLLKKPLTEKGFKFCR 959 Query: 88 FPQGRTLDKDPCTIQEW--NEGKIP-LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEH 144 + I+E+ N+ P + + G GLNL + L W+ Sbjct: 960 LDGSMSRIARTAAIREFSSNDPDSPQIFLLSLKAGGVGLNLT-AASRLYLLDPAWNPACE 1018 Query: 145 QQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 +Q +R + G + V + + +++++E +L+ TK + Sbjct: 1019 EQCFDRC-----HRLGQTKDVTITKFLVRDSVEEAMLELQETKRQL 1059 >gi|118367847|ref|XP_001017133.1| Type III restriction enzyme, res subunit family protein [Tetrahymena thermophila] gi|89298900|gb|EAR96888.1| Type III restriction enzyme, res subunit family protein [Tetrahymena thermophila SB210] Length = 2184 Score = 94.2 bits (233), Expect = 9e-18, Method: Composition-based stats. Identities = 30/160 (18%), Positives = 57/160 (35%), Gaps = 20/160 (12%) Query: 50 EVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAF---------PQGRTLDKDP 98 K+ L+ +++K I++ F L L++ G K+ Sbjct: 1137 VDTSGKMILLDKLVQKYKIEGKKILIFSQFVYMLNLLEEYLRYRQLKYEKIDGSVKSKER 1196 Query: 99 C-TIQEWNEGKI--PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTR 155 I +N+ + + G G+NL NI++ F W+ + Q R Sbjct: 1197 QNAIDRFNDPDKKRDVFLLSTKAGGLGINLT-SANIVIIFDSDWNPQNDVQATAR----- 1250 Query: 156 QRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 + G K+ V VY I + T + + +R K + + Sbjct: 1251 AHRIGQKQEVMVYRFITKKTYEAEMFERATKKLGLDQAIF 1290 >gi|50551421|ref|XP_503184.1| YALI0D23287p [Yarrowia lipolytica] gi|49649052|emb|CAG81384.1| YALI0D23287p [Yarrowia lipolytica] Length = 1660 Score = 94.2 bits (233), Expect = 9e-18, Method: Composition-based stats. Identities = 38/227 (16%), Positives = 80/227 (35%), Gaps = 35/227 (15%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASK-----TVKCLQLANGAVYYDEEKHWKEVHD--- 53 K Y + + + A + K ++ ++ N ++E + + Sbjct: 943 KLYQQMIKHNVLFIGEGVQGATKTGLKGLNNQVMQLRKICNHPFVFEEVEDLVNPNRLTN 1002 Query: 54 -------EKIKALEVIIEK--ANAAPIIVAYH------FNSDLARLQK----AFPQGRTL 94 K + L+ I+ K A I++ + D RL+ G Sbjct: 1003 DNLWRTAGKFELLDRILPKFKAAGHRILMFFQMTQIMDIMEDFMRLKGWQYLRLDGGTKS 1062 Query: 95 DKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIG 152 + + ++N P + G GLNLQ + ++ + W+ + Q Sbjct: 1063 EDRSGLLGKFNAPDSPYFAFLLSTRAGGLGLNLQT-ADTVIIYDTDWNPHQDLQA----- 1116 Query: 153 VTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 R + G + V + LI +++++E +L+R K I ++ A K Sbjct: 1117 QDRAHRIGQTKEVRILRLITEDSVEENILERAHKKLDIDGKVIQAGK 1163 >gi|332190563|gb|AEE28684.1| SNF2 , helicase and zinc-finger domain-containing protein [Arabidopsis thaliana] Length = 1269 Score = 94.2 bits (233), Expect = 9e-18, Method: Composition-based stats. Identities = 24/134 (17%), Positives = 49/134 (36%), Gaps = 17/134 (12%) Query: 68 AAPIIVAYHFNSDLARLQ----------KAFPQGRTLDKDPCTIQEWNE-GKIPLLFAHP 116 IV + L L+ + F T+ +Q++N + ++ Sbjct: 1114 GEKAIVFTQWTKMLDLLEAGLKSSGIQYRRFDGKMTVPARDAAVQDFNTLPDVSVMIMSL 1173 Query: 117 ASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTI 176 + GLN+ ++ LWW+ Q I+R + G R V V ++T+ Sbjct: 1174 KAASLGLNM-VAACHVIMLDLWWNPTTEDQAIDR-----AHRIGQTRPVKVVRFTVKDTV 1227 Query: 177 DELVLQRLRTKSTI 190 ++ +L + K + Sbjct: 1228 EDRILALQQKKRKM 1241 >gi|256785459|ref|ZP_05523890.1| bifunctional protein [Streptomyces lividans TK24] Length = 722 Score = 94.2 bits (233), Expect = 9e-18, Method: Composition-based stats. Identities = 39/197 (19%), Positives = 78/197 (39%), Gaps = 30/197 (15%) Query: 14 DLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKA--NAAPI 71 +L + EA+ A + + + A + K++ L I+++A N Sbjct: 469 ELSASDEEAYREAVRAGNFMAMRRAAYMS-------SGNSAKLERLREIVQEAGENGQKT 521 Query: 72 IVAYHFNSDLARLQKAFP--------------QGRTLDKDPCTIQEWNEGKIP-LLFAHP 116 +V +F LA +++A G + + ++ + P +L Sbjct: 522 VVFSNFKDVLAVVKEALAVETTRVTPVFGPLTGGVPAQRRQEIVDDFAGVQGPAVLLGQI 581 Query: 117 ASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTI 176 + G GLN+Q +++V + + IE V R + G R V V+ L+A + Sbjct: 582 QAAGVGLNMQ-AASVVVICEP-----QIKPTIEHQAVARAHRMGQVRPVRVHRLLATGGV 635 Query: 177 DELVLQRLRTKSTIQDL 193 DE +++ L K+ + D Sbjct: 636 DERMVKMLEAKTRLFDA 652 >gi|255084682|ref|XP_002504772.1| SNF2 super family [Micromonas sp. RCC299] gi|226520041|gb|ACO66030.1| SNF2 super family [Micromonas sp. RCC299] Length = 1710 Score = 94.2 bits (233), Expect = 9e-18, Method: Composition-based stats. Identities = 33/186 (17%), Positives = 65/186 (34%), Gaps = 36/186 (19%) Query: 27 SKTVKCLQL-------------ANGAVYYDEEKHWKEV---HDEKIKALEVIIEK--ANA 68 + +QL A A+ + E K+KAL+ ++ + A Sbjct: 1062 KLSNLLMQLRKVCCHPFIFGDDAAKAIIGASGGNRVEALIEASGKLKALDEMLPRMRAGG 1121 Query: 69 APIIVAYHFNSDLARLQK----------AFPQGRTLDKDPCTIQEWN--EGKIPLLFAHP 116 +++ F L L++ +L + +N +G+ + Sbjct: 1122 HKVLIFSQFTMMLDMLEEFCEARGHAHLRLDGSTSLARRRYETALFNKPDGRHFVYLCST 1181 Query: 117 ASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTI 176 + G G+NLQ + ++ W+ QQ R + G KR V V + N++ Sbjct: 1182 RAGGLGINLQ-SADTVILADPDWNPTYDQQA-----QDRAHRLGQKRPVTVIRMCHANSV 1235 Query: 177 DELVLQ 182 +E +L Sbjct: 1236 EEGILA 1241 >gi|225897906|dbj|BAH30285.1| hypothetical protein [Arabidopsis thaliana] Length = 1270 Score = 94.2 bits (233), Expect = 9e-18, Method: Composition-based stats. Identities = 24/134 (17%), Positives = 49/134 (36%), Gaps = 17/134 (12%) Query: 68 AAPIIVAYHFNSDLARLQ----------KAFPQGRTLDKDPCTIQEWNE-GKIPLLFAHP 116 IV + L L+ + F T+ +Q++N + ++ Sbjct: 1115 GEKAIVFTQWTKMLDLLEAGLKSSGIQYRRFDGKMTVPARDAAVQDFNTLPDVSVMIMSL 1174 Query: 117 ASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTI 176 + GLN+ ++ LWW+ Q I+R + G R V V ++T+ Sbjct: 1175 KAASLGLNM-VAACHVIMLDLWWNPTTEDQAIDR-----AHRIGQTRPVKVVRFTVKDTV 1228 Query: 177 DELVLQRLRTKSTI 190 ++ +L + K + Sbjct: 1229 EDRILALQQKKRKM 1242 >gi|241952408|ref|XP_002418926.1| dna repair and recombination protein rdh54, putative [Candida dubliniensis CD36] gi|223642265|emb|CAX44234.1| dna repair and recombination protein rdh54, putative [Candida dubliniensis CD36] Length = 882 Score = 94.2 bits (233), Expect = 9e-18, Method: Composition-based stats. Identities = 28/140 (20%), Positives = 50/140 (35%), Gaps = 17/140 (12%) Query: 68 AAPIIVAYHFNSDLARLQ----------KAFPQGRTLDKDPCTIQEWN-EGKIPLLFAHP 116 I++ ++ L L+ + + ++N I + Sbjct: 609 KEKIVLISNYTKTLDLLETVLRKINLTFSRLDGSTPNNVRSKLVNQFNTNPDINVFLLSS 668 Query: 117 ASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTI 176 S G G+NL G + L+ F W+ Q + RI + G + F+Y L I Sbjct: 669 KSGGMGINL-VGASRLILFDNDWNPATDLQSMSRI-----HRDGQVKPCFIYRLFTTGCI 722 Query: 177 DELVLQRLRTKSTIQDLLLN 196 DE + QR K+ + L+ Sbjct: 723 DEKIFQRQLVKNKLSSKFLD 742 >gi|156375433|ref|XP_001630085.1| predicted protein [Nematostella vectensis] gi|156217099|gb|EDO38022.1| predicted protein [Nematostella vectensis] Length = 221 Score = 94.2 bits (233), Expect = 9e-18, Method: Composition-based stats. Identities = 29/142 (20%), Positives = 58/142 (40%), Gaps = 20/142 (14%) Query: 69 APIIVAYHFNSDLARLQ------------KAFPQGRTLDKDPCTI--QEWNEGKIPLLFA 114 +++ S L ++ G T +I + N+ I +L Sbjct: 28 HRVLLFCQLKSMLDIVENDLFKTNMPSVTYLRLDGSTPAGSRHSIVHRFNNDPSIDVLLL 87 Query: 115 HPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQN 174 G GLNL G + ++F W+ + Q ++R + G K+ V VY L+ + Sbjct: 88 TTHVGGLGLNLT-GADTVIFVEHDWNPMKDLQAMDR-----AHRIGQKKVVNVYRLVTKG 141 Query: 175 TIDELVLQRLRTKSTIQDLLLN 196 T++E ++ + K TI + +++ Sbjct: 142 TLEEKIMGLQKFKLTIANTVIS 163 >gi|1931638|gb|AAB65473.1| transcription factor RUSH-1alpha isolog; 18684-24052 [Arabidopsis thaliana] Length = 1227 Score = 94.2 bits (233), Expect = 9e-18, Method: Composition-based stats. Identities = 24/134 (17%), Positives = 49/134 (36%), Gaps = 17/134 (12%) Query: 68 AAPIIVAYHFNSDLARLQ----------KAFPQGRTLDKDPCTIQEWNE-GKIPLLFAHP 116 IV + L L+ + F T+ +Q++N + ++ Sbjct: 1072 GEKAIVFTQWTKMLDLLEAGLKSSGIQYRRFDGKMTVPARDAAVQDFNTLPDVSVMIMSL 1131 Query: 117 ASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTI 176 + GLN+ ++ LWW+ Q I+R + G R V V ++T+ Sbjct: 1132 KAASLGLNM-VAACHVIMLDLWWNPTTEDQAIDR-----AHRIGQTRPVKVVRFTVKDTV 1185 Query: 177 DELVLQRLRTKSTI 190 ++ +L + K + Sbjct: 1186 EDRILALQQKKRKM 1199 >gi|42561912|ref|NP_172577.2| SNF2 domain-containing protein / helicase domain-containing protein / zinc finger protein-related [Arabidopsis thaliana] gi|332190562|gb|AEE28683.1| SNF2 , helicase and zinc-finger domain-containing protein [Arabidopsis thaliana] Length = 1226 Score = 94.2 bits (233), Expect = 9e-18, Method: Composition-based stats. Identities = 24/134 (17%), Positives = 49/134 (36%), Gaps = 17/134 (12%) Query: 68 AAPIIVAYHFNSDLARLQ----------KAFPQGRTLDKDPCTIQEWNE-GKIPLLFAHP 116 IV + L L+ + F T+ +Q++N + ++ Sbjct: 1071 GEKAIVFTQWTKMLDLLEAGLKSSGIQYRRFDGKMTVPARDAAVQDFNTLPDVSVMIMSL 1130 Query: 117 ASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTI 176 + GLN+ ++ LWW+ Q I+R + G R V V ++T+ Sbjct: 1131 KAASLGLNM-VAACHVIMLDLWWNPTTEDQAIDR-----AHRIGQTRPVKVVRFTVKDTV 1184 Query: 177 DELVLQRLRTKSTI 190 ++ +L + K + Sbjct: 1185 EDRILALQQKKRKM 1198 >gi|66827541|ref|XP_647125.1| SNF2-related domain-containing protein [Dictyostelium discoideum AX4] gi|60475296|gb|EAL73231.1| SNF2-related domain-containing protein [Dictyostelium discoideum AX4] Length = 1159 Score = 94.2 bits (233), Expect = 9e-18, Method: Composition-based stats. Identities = 32/159 (20%), Positives = 66/159 (41%), Gaps = 20/159 (12%) Query: 52 HDEKIKALEVIIEKA---NAAPIIVAYHFNSDLARLQK----------AFPQGRTLDKDP 98 K L+ I+ K N + +++ L L+ +++ Sbjct: 982 TSTKCLKLKEILAKEIGVNKSKVLIFSQMTRVLDILEDVLDIFGYNFTRLDGSTPVNERQ 1041 Query: 99 CTIQEWNEGK-IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 I ++ + IP+ S G G+NL N+++F+ L ++ + ++R R Sbjct: 1042 SIIDHFSSKETIPVFLLSTNSGGLGINLTC-ANVVIFYDLSFNPQ-----VDRQAEDRAH 1095 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + G +R V +Y L+A+NT+D + + K + D +L Sbjct: 1096 RLGQEREVIIYKLLAENTVDINIHESANQKKKLNDNVLE 1134 >gi|328868273|gb|EGG16651.1| SNF2-related domain-containing protein [Dictyostelium fasciculatum] Length = 1147 Score = 94.2 bits (233), Expect = 9e-18, Method: Composition-based stats. Identities = 33/157 (21%), Positives = 60/157 (38%), Gaps = 18/157 (11%) Query: 52 HDEKIKALEVIIEKANAA-PIIVAYHFNSDLARLQKAFP---------QGRTLDKDPCTI 101 K + L +I + I+V L L+ F G T + I Sbjct: 953 SSAKCQKLVELINQHKDKSKILVFSQMTRVLDILEDVFDHVGLEFTRLDGSTPVTERQDI 1012 Query: 102 QEW--NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQA 159 + N I + + G G+NL NI++F+ + ++ + ++R R + Sbjct: 1013 IDHFTNTDDIRVFLLSTLAGGLGINL-ISANIVIFYDMSFNPQ-----VDRQAEDRAHRL 1066 Query: 160 GFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 G + V VY LI ++D +L +K + D +L Sbjct: 1067 GQTKEVTVYKLITNGSVDNYMLDLSNSKKRLNDSMLE 1103 >gi|297737012|emb|CBI26213.3| unnamed protein product [Vitis vinifera] Length = 1110 Score = 94.2 bits (233), Expect = 9e-18, Method: Composition-based stats. Identities = 33/190 (17%), Positives = 79/190 (41%), Gaps = 26/190 (13%) Query: 28 KTVKCLQLANGA-VYYDEEKHWKEV-----HDEKIKALEVIIEKAN--AAPIIVAYHFNS 79 +++ + N ++ + W++ K + L+ ++ K +++ Sbjct: 678 LSMQLRKCCNHPYLFVGDYNIWQKKEEMVRASGKFELLDRLLPKLQKAGHRVLLFSQMTR 737 Query: 80 DLA---------RLQKAFPQGRTLDKDPCT-IQEWNEGKIP--LLFAHPASCGHGLNLQY 127 + ++ G T ++ T ++++N P + + G GLNLQ Sbjct: 738 LMDILEIYLQMNEIKYLRLDGSTKTEERGTKLKQFNAPDSPYFMFLLSTRAGGLGLNLQT 797 Query: 128 GGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTK 187 + ++ F W+ + QQ +R + G K+ V V+ L++ +I+E++L+R + K Sbjct: 798 -ADTVIIFDSDWNPQMDQQAEDR-----AHRIGQKKEVRVFVLVSVGSIEEVILERAKQK 851 Query: 188 STIQDLLLNA 197 I ++ A Sbjct: 852 MGIDAKVIQA 861 >gi|238878835|gb|EEQ42473.1| chromatin remodelling complex ATPase chain ISW1 [Candida albicans WO-1] Length = 1017 Score = 94.2 bits (233), Expect = 9e-18, Method: Composition-based stats. Identities = 43/225 (19%), Positives = 87/225 (38%), Gaps = 43/225 (19%) Query: 7 FQRELYCDLQGENIEAFNSAS--------KTVKCLQLAN-------------GAVYYDEE 45 Q+ LY + ++I+A N A+ +QL G Y +E Sbjct: 374 MQKNLYQKILEKDIDAVNGANGKKESKTRLLNIVMQLRKCCNHPYLFEGVEPGPPYTTDE 433 Query: 46 KHWKEVHDEKIKALEVIIE--KANAAPIIVAYHFNSDLARL---------QKAFPQGRTL 94 + +K+ L+ +++ + + +++ + L L Q G+T Sbjct: 434 HLV--YNSQKMLILDQLLKKFQQEGSRVLIFSQMSRMLDILEDYCYFREYQYCRIDGQTE 491 Query: 95 DKDP-CTIQEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERI 151 D I E+N+ + + + G G+NL +I++ F W+ + Q ++R Sbjct: 492 HSDRINAIDEYNKPGSEKFIFLLTTRAGGLGINLT-SADIVILFDSDWNPQADLQAMDR- 549 Query: 152 GVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + G + V V+ I + I+E VL+R K + L++ Sbjct: 550 ----AHRIGQTKQVKVFRFITERAIEEKVLERAAQKLRLDQLVIQ 590 >gi|219115127|ref|XP_002178359.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1] gi|217410094|gb|EEC50024.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1] Length = 535 Score = 94.2 bits (233), Expect = 9e-18, Method: Composition-based stats. Identities = 35/163 (21%), Positives = 74/163 (45%), Gaps = 18/163 (11%) Query: 37 NGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDK 96 + +Y +++ + + I++L ++EK F + L+ GR + Sbjct: 365 SSLLYCEDDHTKCLIFAQFIQSL-DVVEKLL---------FKPHIPSLKYLRLDGRVPAR 414 Query: 97 DPCTI-QEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 I +E+N +I +L G GLNL G + ++F ++ Q ++R+ Sbjct: 415 RRYAIAEEFNRNDEIKVLLLTTRVGGLGLNLT-GADTVIFLEHDFNPFADLQAMDRV--- 470 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + G K+AV VY L+ ++ID+ +++ K + + ++NA Sbjct: 471 --HRIGQKKAVCVYRLVLVDSIDQRIMKLQEKKLAMSEAIVNA 511 >gi|325117702|emb|CBZ53253.1| putative SNF2 family helicase [Neospora caninum Liverpool] Length = 1545 Score = 94.2 bits (233), Expect = 9e-18, Method: Composition-based stats. Identities = 26/156 (16%), Positives = 58/156 (37%), Gaps = 21/156 (13%) Query: 50 EVHDEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQ-----------KAFPQGRTLDK 96 + KI+ + I+ + ++ + + L ++ K G T + Sbjct: 1360 VMDSAKIRKMIEIVSEIKKKGEKALIFSQYTTYLDVVEECLTTFCGDIGKCRLDGSTAVE 1419 Query: 97 DPCT-IQEW-NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 D + E+ ++ L + G GLNL ++ W+ + +R Sbjct: 1420 DRQALVDEFSTNPELTLFLLSTKAGGQGLNLT-AARTVILMDQDWNPQ-----NDRQAED 1473 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 R + G + V +Y L + T++E +L+ + K + Sbjct: 1474 RVHRLGQTQDVTIYRLCCRGTVEESILKCCQAKLDL 1509 >gi|170095703|ref|XP_001879072.1| SNF2 family DNA-dependent ATPase [Laccaria bicolor S238N-H82] gi|164646376|gb|EDR10622.1| SNF2 family DNA-dependent ATPase [Laccaria bicolor S238N-H82] Length = 830 Score = 94.2 bits (233), Expect = 1e-17, Method: Composition-based stats. Identities = 35/180 (19%), Positives = 66/180 (36%), Gaps = 18/180 (10%) Query: 32 CLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKAN-AAPIIVAYHFNSDLARLQKAFPQ 90 C+ LA A +EE+ +K L I E+++ I+ F S L ++ + Sbjct: 629 CVPLAIQAKEAEEERPSSAKTRMILKLLNDIDERSDCEEKTIIFSQFTSMLDLIEPFLSE 688 Query: 91 GRTL----------DKDPCTIQEWNEGK-IPLLFAHPASCGHGLNLQYGGNILVFFSLWW 139 + ++ + K ++ + GLNL N ++ LWW Sbjct: 689 EGVKYVRYDGSMSAKEREVSLAKIKSSKSTRVILISFKAGSTGLNLT-ACNNVILVDLWW 747 Query: 140 DLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 + Q +R + G R V ++ L NT+++ +L K + L+ K Sbjct: 748 NPALEDQAFDR-----AHRFGQTRDVNIFKLKIDNTVEDRILALQDKKRQLAQAALSGDK 802 >gi|83766966|dbj|BAE57106.1| unnamed protein product [Aspergillus oryzae] Length = 1157 Score = 94.2 bits (233), Expect = 1e-17, Method: Composition-based stats. Identities = 31/171 (18%), Positives = 67/171 (39%), Gaps = 19/171 (11%) Query: 40 VYYDEEKHWKEV-HDEKIKALEVIIE-KANAAPIIVAYHFNSDLARLQ----------KA 87 +Y + +V KI+ L I+ +++ IV F S L +++ Sbjct: 903 IYLNPGDEDNQVLPSTKIRHLMKILRRESSDYKFIVFSVFTSMLDKIEPFLQRAGIGFAR 962 Query: 88 FPQGRTLDKDPCTIQEW-NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 + G D ++ + N +L + GLNL + +V +W+ +Q Sbjct: 963 YDGGMRNDLREASLNKLRNNSGTRVLLCSLRAGALGLNLT-AASRVVILEPFWNPFVEEQ 1021 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 I+R+ + V +Y LI ++T++E ++ K + ++ + Sbjct: 1022 AIDRV-----HRLNQTVDVKIYKLIIKDTVEERIIDLQERKRELANVTIEG 1067 >gi|317138160|ref|XP_001816716.2| ISWI chromatin-remodeling complex ATPase ISW2 [Aspergillus oryzae RIB40] Length = 1122 Score = 94.2 bits (233), Expect = 1e-17, Method: Composition-based stats. Identities = 41/231 (17%), Positives = 87/231 (37%), Gaps = 43/231 (18%) Query: 6 KFQRELYCDLQGENIEAFNSAS--------KTVKCLQLAN-------------GAVYYDE 44 + Q + Y + ++I+A N A+ +QL G Y + Sbjct: 432 EMQVKWYQKILEKDIDAVNGAAGKRESKTRLLNIVMQLRKCCNHPYLFEGAEPGPPYTTD 491 Query: 45 EKHWKEVHDEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQ---------KAFPQGRT 93 E + K+ L+ ++ + + +++ + L L+ G T Sbjct: 492 EHLV--YNAGKMSILDKLLARMQKQGSRVLIFSQMSRVLDILEDYCVFREYNYCRIDGTT 549 Query: 94 LDKDP-CTIQEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 +D I E+N+ + + G G+NL +I+V + W+ + Q ++R Sbjct: 550 AHEDRIAAIDEYNKPGSDKFVFLLTTRAGGLGINLTT-ADIVVLYDSDWNPQADLQAMDR 608 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 + G + V V+ + +N I+E VL+R K + L++ + + Sbjct: 609 -----AHRIGQTKQVVVFRFVTENAIEEKVLERAAQKLRLDQLVIQQGRAQ 654 >gi|310800518|gb|EFQ35411.1| SNF2 family domain-containing protein [Glomerella graminicola M1.001] Length = 1150 Score = 94.2 bits (233), Expect = 1e-17, Method: Composition-based stats. Identities = 33/152 (21%), Positives = 55/152 (36%), Gaps = 17/152 (11%) Query: 54 EKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTL----------DKDPCTIQE 103 IKAL + ++ +V F S L+ ++ A + + E Sbjct: 984 ALIKALRGLRKEQPRVKSVVFSQFTSFLSLIEPALTRANIKFLRLDGSMAQKARAAVLNE 1043 Query: 104 WNEGKI-PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFK 162 + E K +L + G GLNL + WW Q I+R+ + G Sbjct: 1044 FQESKTFTVLLLSLRAGGVGLNLT-SAKRVFMMDPWWSFAVEAQAIDRV-----HRMGQD 1097 Query: 163 RAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 V VY I + +++E +L+ K I L Sbjct: 1098 EEVKVYRFIVKESVEERMLRVQDRKKFIATSL 1129 >gi|302915977|ref|XP_003051799.1| SNF2 family DNA-dependent ATPase domain-containing protein [Nectria haematococca mpVI 77-13-4] gi|256732738|gb|EEU46086.1| SNF2 family DNA-dependent ATPase domain-containing protein [Nectria haematococca mpVI 77-13-4] Length = 1890 Score = 94.2 bits (233), Expect = 1e-17, Method: Composition-based stats. Identities = 38/207 (18%), Positives = 71/207 (34%), Gaps = 32/207 (15%) Query: 4 YHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVII 63 Y QR + +G +IE A K L E + + Sbjct: 1616 YDDTQR--ILNKKGTSIEDTQHAPKLTALRDLLVDCGIGVEGNESN----------DPLY 1663 Query: 64 EKANAAPIIVAYHFNSDLARLQK-------------AFPQGRTLDKDPCTIQEWN-EGKI 109 + ++ L +Q +K + ++N + Sbjct: 1664 QPIKPHRALIFCQMKEMLDMVQNKVLKELLPSVSHLRLDGSVEANKRQDIVNKFNSDPSY 1723 Query: 110 PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYY 169 +L + G GLNL G + ++F W+ ++ Q ++R + G K+ V VY Sbjct: 1724 DVLLLTTSVGGLGLNLT-GADTVIFVEHDWNPQKDLQAMDR-----AHRIGQKKVVNVYR 1777 Query: 170 LIAQNTIDELVLQRLRTKSTIQDLLLN 196 LI + T++E +L R K + ++N Sbjct: 1778 LITRGTLEEKILNLQRFKIDVASTVVN 1804 >gi|218457856|ref|YP_002418861.1| hypothetical protein PPSN_gp55 [Pseudomonas phage SN] gi|218379124|emb|CAT99710.1| hypothetical protein [Pseudomonas phage SN] gi|294663794|gb|ADF29348.1| putative helicase [Pseudomonas phage JG024] Length = 519 Score = 94.2 bits (233), Expect = 1e-17, Method: Composition-based stats. Identities = 40/215 (18%), Positives = 87/215 (40%), Gaps = 24/215 (11%) Query: 2 KQYHKFQRELYCDLQGEN---IEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDE---- 54 K Y + + + + LQ E+ +F++A+ K Q+A+G + E D Sbjct: 300 KVYQRVEEDYHFVLQNEDFMLDVSFDAAAARSKLKQVASGYINVYGEPVILPPEDNPRFA 359 Query: 55 -KIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFP---------QGRTLD-KDPCTIQE 103 LE ++E+ IIV ++ +++ G T + + I + Sbjct: 360 VFTDLLEGLLEEDPERSIIVWAMRIQEIDQIKAYLEAQGISFGTYYGETKEAEREKLIDD 419 Query: 104 WNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKR 163 + ++ + +PA+ G G+ L ++ ++++ D E Q R + G Sbjct: 420 FQAKRVQVFLGNPAAAGIGITLT-AADVAIYYTTDEDNELRMQ-----SEDRNHRIGTVN 473 Query: 164 AVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNAL 198 +V + LI ++IDE + L K + +++ + Sbjct: 474 SVLYFDLICLDSIDEKIQVSLEWKRNLASYVVDGV 508 >gi|159489044|ref|XP_001702507.1| predicted protein [Chlamydomonas reinhardtii] gi|158280529|gb|EDP06286.1| predicted protein [Chlamydomonas reinhardtii] Length = 533 Score = 94.2 bits (233), Expect = 1e-17, Method: Composition-based stats. Identities = 36/149 (24%), Positives = 65/149 (43%), Gaps = 19/149 (12%) Query: 58 ALEVIIEKANAAPIIVAYHFNSDLARL-----QKAFPQGR-----TLDKDPCTIQEWNEG 107 L V+ + ++V ++ S L ++ +P R T++K ++ +N+ Sbjct: 360 MLHVLYTETTDRIVLV-SNYTSTLDLFVALCRERGYPFVRLDGTTTINKRQKLVKVFNDP 418 Query: 108 --KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 K + G GLNL G N LV F W+ Q R+ + G ++ V Sbjct: 419 VEKQFAFLLSSKAGGCGLNL-IGANRLVLFDPDWNPANDAQAAARVW-----RDGQRKRV 472 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 FVY ++ +I+E V QR +K ++ L+ Sbjct: 473 FVYRFLSTGSIEEKVFQRQMSKEGLKQLV 501 >gi|291437491|ref|ZP_06576881.1| conserved hypothetical protein [Streptomyces ghanaensis ATCC 14672] gi|291340386|gb|EFE67342.1| conserved hypothetical protein [Streptomyces ghanaensis ATCC 14672] Length = 732 Score = 94.2 bits (233), Expect = 1e-17, Method: Composition-based stats. Identities = 40/193 (20%), Positives = 71/193 (36%), Gaps = 26/193 (13%) Query: 14 DLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKA--NAAPI 71 +L + EA+ A + + + A Y K K+ L I+++A N Sbjct: 508 ELSASDEEAYREAVRAGNFMAMRRAA-YLRPGK------SAKLGRLREIVQEAGENGRKT 560 Query: 72 IVAYHFNSDL----------ARLQKAFPQGRTLDKDPCTIQEWNEGKIP-LLFAHPASCG 120 +V HF L R+ + + ++ P +L A + G Sbjct: 561 VVFSHFRDVLGVVEEALAADTRVFGPLTGSVPAGRRQRLVDDFAGAPGPAVLLAQIQAAG 620 Query: 121 HGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELV 180 GLNLQ +++V Q + R + G R V V+ L+A +DE + Sbjct: 621 VGLNLQ-AASVVVLCEPQIKPTLEHQAVAR-----AHRMGQVRPVRVHRLLATGGVDERL 674 Query: 181 LQRLRTKSTIQDL 193 ++ L K+ + D Sbjct: 675 VRMLEDKTRLFDA 687 >gi|224089945|ref|XP_002308876.1| chromatin remodeling complex subunit [Populus trichocarpa] gi|222854852|gb|EEE92399.1| chromatin remodeling complex subunit [Populus trichocarpa] Length = 799 Score = 94.2 bits (233), Expect = 1e-17, Method: Composition-based stats. Identities = 32/169 (18%), Positives = 63/169 (37%), Gaps = 23/169 (13%) Query: 42 YDEEKHWKEVHDEKIKALEVIIEKAN----AAPIIVAYHFNSDLARLQKAFPQGRTL--- 94 + + K+ AL ++ + A +V F L L++ + Sbjct: 613 DNANTSSRTTTSSKVSALIKLLIASRVENPARKSVVFSQFQKMLVLLEEPLKEAGFKILR 672 Query: 95 -------DKDPCTIQEW--NEGKIP-LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEH 144 K I+++ P +L A + G G+NL + + WW+ Sbjct: 673 LDGSMNAKKRAQVIKQFGVPGPDGPTVLLASLKASGAGINLAV-ASRVYLLEPWWNPAVE 731 Query: 145 QQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDL 193 +Q ++R+ + G + V V LIAQ++I+E +L+ K + Sbjct: 732 EQAMDRV-----HRIGQEEDVTVVRLIAQSSIEERILEMQERKKKLAKE 775 >gi|294659674|ref|XP_462077.2| DEHA2G12496p [Debaryomyces hansenii CBS767] gi|199434146|emb|CAG90563.2| DEHA2G12496p [Debaryomyces hansenii] Length = 1405 Score = 94.2 bits (233), Expect = 1e-17, Method: Composition-based stats. Identities = 28/159 (17%), Positives = 60/159 (37%), Gaps = 20/159 (12%) Query: 52 HDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARL----------QKAFPQGRTLDKDPC 99 K+ LE ++ + +++ L L + G + Sbjct: 666 SSGKMVLLEQLLTRLKKEGHRVLIFSQMVRMLDILGDYLSIKGYQFQRLDGGIPSSQRRI 725 Query: 100 TIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 +I +N + G G+NL + +V F W+ + Q + R Sbjct: 726 SIDHFNAPDSKDFAFLLSTRAGGLGINLMT-ADTVVIFDSDWNPQADLQAMAR-----AH 779 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + G K V VY ++++T++E +L+R R K ++ +++ Sbjct: 780 RIGQKNHVSVYRFVSKDTVEEEILERARKKMILEYAIIS 818 >gi|116207742|ref|XP_001229680.1| hypothetical protein CHGG_03164 [Chaetomium globosum CBS 148.51] gi|88183761|gb|EAQ91229.1| hypothetical protein CHGG_03164 [Chaetomium globosum CBS 148.51] Length = 1852 Score = 94.2 bits (233), Expect = 1e-17, Method: Composition-based stats. Identities = 25/111 (22%), Positives = 50/111 (45%), Gaps = 7/111 (6%) Query: 87 AFPQGRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQ 145 ++ + ++N + +L + G GLNL G + ++F W+ ++ Sbjct: 1661 RLDGSVEANRRQDIVNKFNSDPSYDVLLLTTSVGGLGLNLT-GADTVIFVEHDWNPQKDL 1719 Query: 146 QMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 Q ++R + G K+ V VY LI + T++E +L R K + ++N Sbjct: 1720 QAMDR-----AHRIGQKKVVNVYRLITRGTLEEKILSLQRFKIDVASTVVN 1765 >gi|255724370|ref|XP_002547114.1| SNF2-family ATP dependent chromatin remodeling factor snf21 [Candida tropicalis MYA-3404] gi|240135005|gb|EER34559.1| SNF2-family ATP dependent chromatin remodeling factor snf21 [Candida tropicalis MYA-3404] Length = 1680 Score = 94.2 bits (233), Expect = 1e-17, Method: Composition-based stats. Identities = 45/227 (19%), Positives = 87/227 (38%), Gaps = 35/227 (15%) Query: 2 KQYHKFQRELYC-----DLQGENIEAFNSASKTVKCLQLANGAVYYDEEKH----WKEVH 52 K Y + R + E + N+ ++ ++ ++ N Y+E +H E Sbjct: 1035 KLYQQMLRYNKLYTGDPENGAEPLTIKNANNQIMQLKKICNHPFVYEEVEHFINPSIETD 1094 Query: 53 DE------KIKALEVIIEK--ANAAPIIVAYH------FNSDLAR---LQKAFPQGRTL- 94 D+ K + L+ ++ K A +++ + D R L+ G T Sbjct: 1095 DQIWRVAGKFELLDKVLPKFKATGHKVLMFFQMTQIMNIMEDFLRFRGLKYMRLDGGTKA 1154 Query: 95 DKDPCTIQEWNEGKIPLL--FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIG 152 D ++ +N + G GLNLQ + ++ F W+ + Q Sbjct: 1155 DDRTELLKLFNAPDSDYFCFLLSTRAGGLGLNLQT-ADTVIIFDTDWNPHQDLQA----- 1208 Query: 153 VTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 R + G K V + LI +N+++E++L+R K I ++ A K Sbjct: 1209 QDRAHRIGQKNEVRILRLITENSVEEMILERAHAKLEIDGKVIQAGK 1255 >gi|301107330|ref|XP_002902747.1| DNA repair protein RAD5, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin, putative [Phytophthora infestans T30-4] gi|262097865|gb|EEY55917.1| DNA repair protein RAD5, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin, putative [Phytophthora infestans T30-4] Length = 1036 Score = 94.2 bits (233), Expect = 1e-17, Method: Composition-based stats. Identities = 28/179 (15%), Positives = 67/179 (37%), Gaps = 28/179 (15%) Query: 44 EEKHWKEVHDEKIKAL-----------EVIIEKANAAPIIVAYHFNSDLARLQK------ 86 ++ + K++ L E ++V + S L + + Sbjct: 845 DDDDGTGLESTKLQQLLRDVQAIKLENENADSPDQKRKVVVFSQWTSMLGMVSQLLTRHG 904 Query: 87 ----AFPQGRTLDKDPCTIQEW-NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDL 141 +F G + + ++ + + +L + G GLNL ++++ WW+ Sbjct: 905 FSHCSFNGGLNQEARERVLTKFAKDPDVEVLVISLKAGGVGLNLTC-ASVVILLDPWWNP 963 Query: 142 EEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKK 200 +Q ++R+ + G + V V + NT+++++LQ + K + +L K Sbjct: 964 GVEEQAVDRV-----HRLGQTQDVIVKRYVVNNTVEDMILQLQQRKEKLAKHVLVVAKA 1017 >gi|134055454|emb|CAK43969.1| unnamed protein product [Aspergillus niger] Length = 1163 Score = 94.2 bits (233), Expect = 1e-17, Method: Composition-based stats. Identities = 42/231 (18%), Positives = 88/231 (38%), Gaps = 43/231 (18%) Query: 6 KFQRELYCDLQGENIEAFNSAS--------KTVKCLQLAN-------------GAVYYDE 44 + Q + Y + ++I+A N A+ +QL G Y + Sbjct: 434 EMQVKWYQKILEKDIDAVNGAAGKRESKTRLLNIVMQLRKCCNHPYLFEGAEPGPPYTTD 493 Query: 45 EKHWKEVHDEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQ---------KAFPQGRT 93 E + K+ L+ ++ + + +++ + L L+ G T Sbjct: 494 EHLV--YNAGKMTILDKLLARMQKQGSRVLIFSQMSRVLDILEDYCVFREYNYCRIDGTT 551 Query: 94 LDKDP-CTIQEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 +D I E+N+ + + + G G+NL +I+V F W+ + Q ++R Sbjct: 552 AHEDRIAAIDEYNKPGSEKFIFLLTTRAGGLGINLTT-ADIVVLFDSDWNPQADLQAMDR 610 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 + G + V V+ + +N I+E VL+R K + L++ + + Sbjct: 611 -----AHRIGQTKQVVVFRFVTENAIEEKVLERAAQKLRLDQLVIQQGRAQ 656 >gi|115389802|ref|XP_001212406.1| chromatin remodelling complex ATPase chain ISW1 [Aspergillus terreus NIH2624] gi|114194802|gb|EAU36502.1| chromatin remodelling complex ATPase chain ISW1 [Aspergillus terreus NIH2624] Length = 1119 Score = 94.2 bits (233), Expect = 1e-17, Method: Composition-based stats. Identities = 40/231 (17%), Positives = 86/231 (37%), Gaps = 43/231 (18%) Query: 6 KFQRELYCDLQGENIEAFNSAS--------KTVKCLQLAN-------------GAVYYDE 44 + Q + Y + ++I+A N A+ +QL G Y + Sbjct: 429 EMQVKWYQKILEKDIDAVNGAAGKRESKTRLLNIVMQLRKCCNHPYLFEGAEPGPPYTTD 488 Query: 45 EKHWKEVHDEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQ---------KAFPQGRT 93 E + K+ L+ ++ + + +++ + L L+ G T Sbjct: 489 EHLV--YNAGKMVILDKLLSRMQKQGSRVLIFSQMSRVLDILEDYCVFREYNYCRIDGTT 546 Query: 94 LDKDP-CTIQEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 +D I ++N + + G G+NL +I+V + W+ + Q ++R Sbjct: 547 AHEDRIAAIDDYNRPGSDKFIFLLTTRAGGLGINLTT-ADIVVLYDSDWNPQADLQAMDR 605 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 + G + V V+ + +N I+E VL+R K + L++ + + Sbjct: 606 -----AHRIGQTKQVVVFRFVTENAIEEKVLERAAQKLRLDQLVIQQGRAQ 651 >gi|115690971|ref|XP_001203541.1| PREDICTED: hypothetical protein, partial [Strongylocentrotus purpuratus] gi|115733996|ref|XP_001199700.1| PREDICTED: hypothetical protein, partial [Strongylocentrotus purpuratus] Length = 221 Score = 94.2 bits (233), Expect = 1e-17, Method: Composition-based stats. Identities = 34/165 (20%), Positives = 61/165 (36%), Gaps = 25/165 (15%) Query: 43 DEEKHWKEVHDEKIKALEV--IIEKANAA--PIIVAYHFNSDLARLQK----------AF 88 D E+ W K+ AL + E+A IV F S L L+K Sbjct: 31 DTEREWH--SSAKVDALMECLLTERAADKTTKSIVVSQFTSFLDLLKKPLTEKGFKFCRL 88 Query: 89 PQGRTLDKDPCTIQEW--NEGKIP-LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQ 145 + I+E+ N+ P + + G GLNL + L W+ + Sbjct: 89 DGSMSRIARTAAIREFSSNDPDSPQIFLLSLKAGGVGLNLT-AASRLYLLDPAWNPACEE 147 Query: 146 QMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 Q +R + G + V + + +++++E +L+ TK + Sbjct: 148 QCFDRC-----HRLGQTKDVTITKFLVRDSVEEAMLELQETKRQL 187 >gi|308498978|ref|XP_003111675.1| CRE-SSL-1 protein [Caenorhabditis remanei] gi|308239584|gb|EFO83536.1| CRE-SSL-1 protein [Caenorhabditis remanei] Length = 1986 Score = 94.2 bits (233), Expect = 1e-17, Method: Composition-based stats. Identities = 31/155 (20%), Positives = 66/155 (42%), Gaps = 19/155 (12%) Query: 55 KIKALEVIIEKAN--AAPIIVAYHFNSDLARLQ---------KAFPQGRT-LDKDPCTIQ 102 K++ L +++ + ++ + L LQ G T +++ ++ Sbjct: 1254 KLQTLALLLRQLYIYKHRCLIFTQMSKMLDVLQTFLSHHGYQYFRLDGTTGVEQRQAMME 1313 Query: 103 EWNEG-KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGF 161 +N K+ S G G+NL G + ++F+ W+ Q +R + G Sbjct: 1314 RFNADSKVFCFILSTRSGGVGVNLT-GADTVIFYDSDWNPTMDAQAQDRC-----HRIGQ 1367 Query: 162 KRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 R V +Y LI++ TI+E +L++ K + +L ++ Sbjct: 1368 TRNVSIYRLISERTIEENILKKATQKRRLGELAID 1402 >gi|302839537|ref|XP_002951325.1| hypothetical protein VOLCADRAFT_61396 [Volvox carteri f. nagariensis] gi|300263300|gb|EFJ47501.1| hypothetical protein VOLCADRAFT_61396 [Volvox carteri f. nagariensis] Length = 192 Score = 94.2 bits (233), Expect = 1e-17, Method: Composition-based stats. Identities = 29/137 (21%), Positives = 55/137 (40%), Gaps = 19/137 (13%) Query: 67 NAAPIIVAYHFNSDLARLQKAF---------PQGRTLDKDPCTI-QEWN-EGKIPLLFAH 115 ++ L L++ G T + + Q +N + KI + Sbjct: 52 GGHRALIFTQMAKMLDVLEEFLNLHGHTYMRLDGSTRPEQRQVLMQRFNTDPKIFVFILS 111 Query: 116 PASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA--VFVYYLIAQ 173 S G G+NL G + ++F+ W+ Q +R + G R V +Y L+++ Sbjct: 112 TRSGGVGINLT-GADTVIFYDSDWNPAMDAQAQDRC-----HRIGQTREVCVHIYRLVSE 165 Query: 174 NTIDELVLQRLRTKSTI 190 NTI+E +L++ K + Sbjct: 166 NTIEENILRKSDQKRQL 182 >gi|239929154|ref|ZP_04686107.1| bifunctional protein [Streptomyces ghanaensis ATCC 14672] Length = 722 Score = 94.2 bits (233), Expect = 1e-17, Method: Composition-based stats. Identities = 40/193 (20%), Positives = 71/193 (36%), Gaps = 26/193 (13%) Query: 14 DLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKA--NAAPI 71 +L + EA+ A + + + A Y K K+ L I+++A N Sbjct: 498 ELSASDEEAYREAVRAGNFMAMRRAA-YLRPGK------SAKLGRLREIVQEAGENGRKT 550 Query: 72 IVAYHFNSDL----------ARLQKAFPQGRTLDKDPCTIQEWNEGKIP-LLFAHPASCG 120 +V HF L R+ + + ++ P +L A + G Sbjct: 551 VVFSHFRDVLGVVEEALAADTRVFGPLTGSVPAGRRQRLVDDFAGAPGPAVLLAQIQAAG 610 Query: 121 HGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELV 180 GLNLQ +++V Q + R + G R V V+ L+A +DE + Sbjct: 611 VGLNLQ-AASVVVLCEPQIKPTLEHQAVAR-----AHRMGQVRPVRVHRLLATGGVDERL 664 Query: 181 LQRLRTKSTIQDL 193 ++ L K+ + D Sbjct: 665 VRMLEDKTRLFDA 677 >gi|323453618|gb|EGB09489.1| hypothetical protein AURANDRAFT_71326 [Aureococcus anophagefferens] Length = 1707 Score = 94.2 bits (233), Expect = 1e-17, Method: Composition-based stats. Identities = 31/147 (21%), Positives = 57/147 (38%), Gaps = 18/147 (12%) Query: 65 KANAAPIIVAYHFNSDLARLQKAF----------PQGRTLDKDPCTIQEWNEGKIP--LL 112 KA +++ + + L+ F D+ + +N+ P + Sbjct: 721 KAAGHRVLLFSQMTALMDLLEDFFALRDYDYLRLDGSTAADERERRMARFNDPSSPAFVF 780 Query: 113 FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIA 172 + G GLNL + +V F W+ Q R + G K V V+ LI+ Sbjct: 781 LLSTRAGGLGLNL-ASADTVVIFDSDWNPMMDAQA-----QDRAHRIGQKNDVRVFRLIS 834 Query: 173 QNTIDELVLQRLRTKSTIQDLLLNALK 199 + ++E +LQR K + +L++ A K Sbjct: 835 TSPVEERILQRATDKLNMNNLIVEAGK 861 >gi|221488861|gb|EEE27075.1| helicase, putative [Toxoplasma gondii GT1] Length = 1168 Score = 94.2 bits (233), Expect = 1e-17, Method: Composition-based stats. Identities = 23/154 (14%), Positives = 56/154 (36%), Gaps = 21/154 (13%) Query: 52 HDEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQ-----------KAFPQGRTLDKDP 98 KI+ + ++ + ++ + + L ++ K G T +D Sbjct: 987 DSAKIRKMIELVSEIKKKGEKALIFSQYTTYLDVVEESLTTFCGDIGKCRLDGSTAVEDR 1046 Query: 99 CT-IQEW-NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 + ++ + + + G GLNL ++ W+ + +R R Sbjct: 1047 QALVDDFSTNPDLTIFLLSTKAGGQGLNLT-AARTVILMDQDWNPQ-----NDRQAEDRV 1100 Query: 157 RQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 + G + V +Y L + T++E +L+ + K + Sbjct: 1101 HRLGQTQDVTIYRLCCRGTVEESILKCCQAKLDL 1134 >gi|218195896|gb|EEC78323.1| hypothetical protein OsI_18057 [Oryza sativa Indica Group] Length = 987 Score = 94.2 bits (233), Expect = 1e-17, Method: Composition-based stats. Identities = 26/162 (16%), Positives = 57/162 (35%), Gaps = 19/162 (11%) Query: 42 YDEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAF----------P 89 D E + K+ + +++ + +++ L +Q+A Sbjct: 625 DDVELQVGQDVSCKLSFMMSLLQNLVSEGHNVLIFSQTRKMLNIIQEAIILEGYKFLRID 684 Query: 90 QGRTLDKDPCTIQEWNEG-KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMI 148 + + ++++ EG P+ G GL L ++V W+ Q + Sbjct: 685 GTTKISERERIVKDFQEGPGAPIFLLTTQVGGLGLTLTKAARVIV-VDPAWNPSTDNQSV 743 Query: 149 ERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 +R + G + V VY L+ TI+E + + K + Sbjct: 744 DR-----AYRIGQMKDVIVYRLMTSGTIEEKIYKLQVFKGAL 780 >gi|209882325|ref|XP_002142599.1| SNF2 family N-terminal domain-containing protein [Cryptosporidium muris RN66] gi|209558205|gb|EEA08250.1| SNF2 family N-terminal domain-containing protein [Cryptosporidium muris RN66] Length = 1866 Score = 94.2 bits (233), Expect = 1e-17, Method: Composition-based stats. Identities = 26/160 (16%), Positives = 61/160 (38%), Gaps = 24/160 (15%) Query: 55 KIKALEVIIEKAN--AAPIIVAYHFNSDLARLQKAFP------------QGRTLDKDPCT 100 K+ L+ ++ + +++ L + + G+ L K Sbjct: 865 KLCLLDKLLSRLKEKGNRVLIFSQMVRMLNIISEFLILRGFRHQRLDGTMGKELRK--KA 922 Query: 101 IQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQ 158 + +N + G G+NL + ++ + W+ + Q R + Sbjct: 923 MDHFNSPNSDDFCFLLSTKAGGLGINLTT-ADTVIIYDSDWNPQNDLQAEAR-----AHR 976 Query: 159 AGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNAL 198 G + V +Y L+ +++I+E +L+R +TK + L++ L Sbjct: 977 IGQTKQVQIYRLVTKDSIEENILERAKTKMVLDTLVVQGL 1016 >gi|123424079|ref|XP_001306506.1| SNF2 family N-terminal domain containing protein [Trichomonas vaginalis G3] gi|121888084|gb|EAX93576.1| SNF2 family N-terminal domain containing protein [Trichomonas vaginalis G3] Length = 1366 Score = 94.2 bits (233), Expect = 1e-17, Method: Composition-based stats. Identities = 26/154 (16%), Positives = 57/154 (37%), Gaps = 18/154 (11%) Query: 56 IKALEVIIEKANAAPIIVAYHFNSDLARLQKAF---------PQGRTLDKDPCT-IQEWN 105 I L +++ N +++ + L L+ G D T I + Sbjct: 579 IDKLLPKLKQKNEK-VLIFSQWTHILDILEDYLRYISFNYERLDGSVKPSDRQTAIDRFK 637 Query: 106 EGKIP-LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA 164 + + + G G+NL + ++ F W+ + Q R + G + Sbjct: 638 DNANSFVFLISTKAGGVGINLTT-ASTVILFDSDWNPQNDLQAEARC-----HRIGQTKE 691 Query: 165 VFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNAL 198 V VY L+ +NT + +++ K ++ ++ + L Sbjct: 692 VKVYRLVTRNTYESKMVEVSCKKMFLEHVIFDGL 725 >gi|157875048|ref|XP_001685931.1| DNA-dependent ATPase; transcription activator [Leishmania major strain Friedlin] gi|68129004|emb|CAJ06440.1| putative DNA-dependent ATPase [Leishmania major strain Friedlin] Length = 1103 Score = 94.2 bits (233), Expect = 1e-17, Method: Composition-based stats. Identities = 46/225 (20%), Positives = 81/225 (36%), Gaps = 41/225 (18%) Query: 6 KFQRELYCDLQGENIEAFN-----SASKTV---KCLQLANGAVYYDEEKH-WKEVHDEKI 56 K QRE Y ++ ++ E N AS T ++ N D + V DEK+ Sbjct: 407 KKQREWYMNVLAKDAEVLNKAGGSVASLTNVMMSLRKVINHPYLMDGGEEGPPFVTDEKL 466 Query: 57 -----------KALEVIIEKANAA-PIIVAYHFNSDLARLQ---------KAFPQGRT-- 93 K L + +++ F S L L+ G T Sbjct: 467 VRTSGKMVILDKLLHRLRADVQGRHKVLIFSQFTSMLNILEDYCNMRGFMYCRIDGNTSG 526 Query: 94 LDKDPCTIQEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERI 151 D+D + +N + + G G+NLQ N ++ + W+ + Q Sbjct: 527 YDRDSQ-MASFNSPSSDYFIFLLSTRAGGLGINLQ-AANHVILYDSDWNPQMDLQA---- 580 Query: 152 GVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 R + G KR+V VY + T++E + +R K + +++ Sbjct: 581 -QDRAHRIGQKRSVRVYRFVTDGTLEEKMYRRALKKLYLDAVVVQ 624 >gi|83764570|dbj|BAE54714.1| unnamed protein product [Aspergillus oryzae] Length = 1113 Score = 94.2 bits (233), Expect = 1e-17, Method: Composition-based stats. Identities = 41/231 (17%), Positives = 87/231 (37%), Gaps = 43/231 (18%) Query: 6 KFQRELYCDLQGENIEAFNSAS--------KTVKCLQLAN-------------GAVYYDE 44 + Q + Y + ++I+A N A+ +QL G Y + Sbjct: 423 EMQVKWYQKILEKDIDAVNGAAGKRESKTRLLNIVMQLRKCCNHPYLFEGAEPGPPYTTD 482 Query: 45 EKHWKEVHDEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQ---------KAFPQGRT 93 E + K+ L+ ++ + + +++ + L L+ G T Sbjct: 483 EHLV--YNAGKMSILDKLLARMQKQGSRVLIFSQMSRVLDILEDYCVFREYNYCRIDGTT 540 Query: 94 LDKDP-CTIQEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 +D I E+N+ + + G G+NL +I+V + W+ + Q ++R Sbjct: 541 AHEDRIAAIDEYNKPGSDKFVFLLTTRAGGLGINLTT-ADIVVLYDSDWNPQADLQAMDR 599 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 + G + V V+ + +N I+E VL+R K + L++ + + Sbjct: 600 -----AHRIGQTKQVVVFRFVTENAIEEKVLERAAQKLRLDQLVIQQGRAQ 645 >gi|312219184|emb|CBX99128.1| similar to SNF2 family helicase/ATPase PasG [Leptosphaeria maculans] Length = 907 Score = 94.2 bits (233), Expect = 1e-17, Method: Composition-based stats. Identities = 26/143 (18%), Positives = 55/143 (38%), Gaps = 21/143 (14%) Query: 68 AAPIIVAYHFNSDLARL---------QKAFPQGRTLDKDPC-TIQEWNEGK-----IPLL 112 +++ F + L L + A G D I +N+ + Sbjct: 674 GHKVLIFSQFTTTLDLLGQYLDLRSWKYARIDGSVAQSDRQEQILAFNKPNKSKDATDIF 733 Query: 113 FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIA 172 + G G+NL + ++ F W+ ++ Q ++R + G R V VY Sbjct: 734 ILSTRAGGQGINL-AAADTVILFDSDWNPQQDLQAMDR-----AHRIGQTRNVIVYRFAT 787 Query: 173 QNTIDELVLQRLRTKSTIQDLLL 195 +NT+++ +L+ K ++ L++ Sbjct: 788 RNTVEQKLLESAEGKRRLEKLVI 810 >gi|296421483|ref|XP_002840294.1| hypothetical protein [Tuber melanosporum Mel28] gi|295636509|emb|CAZ84485.1| unnamed protein product [Tuber melanosporum] Length = 1154 Score = 94.2 bits (233), Expect = 1e-17, Method: Composition-based stats. Identities = 37/177 (20%), Positives = 70/177 (39%), Gaps = 24/177 (13%) Query: 31 KCLQLANGAVYYDEEKHWKEVHDEKIKAL-EVIIE-KANAAPIIVAYHFNSDLARLQKAF 88 K LQ+ + A+ ++E W + K++AL +++IE + +++ F L L+ Sbjct: 942 KILQM-SHAILGEDE--W--MASGKVEALSKLLIEMREKGDRVLIFSQFTQVLDLLELVM 996 Query: 89 ---------PQGRTLDKDPCTIQEW--NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSL 137 G T + + E I + G G+NL N ++ F Sbjct: 997 TTHGFGFLRIDGSTPVDMRQDMIDQYHEEEDIMTFLLSTKAGGFGINL-ACANKVIIFDS 1055 Query: 138 WWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 ++ + Q +R + G R V V L+ + TI+E +L TK + + Sbjct: 1056 SFNPHDDAQASDR-----AHRVGQTREVEVIRLVTKGTIEEQILALANTKLALDQSI 1107 >gi|309366266|emb|CAP21787.2| CBR-SSL-1 protein [Caenorhabditis briggsae AF16] Length = 1964 Score = 93.8 bits (232), Expect = 1e-17, Method: Composition-based stats. Identities = 24/104 (23%), Positives = 50/104 (48%), Gaps = 7/104 (6%) Query: 94 LDKDPCTIQEWNEG-KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIG 152 +++ ++ +N K+ S G G+NL G + ++F+ W+ Q +R Sbjct: 1329 VEQRQAMMERFNADSKVFCFILSTRSGGVGVNLT-GADTVIFYDSDWNPTMDAQAQDRC- 1386 Query: 153 VTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + G R V +Y LI++ TI+E +L++ K + +L ++ Sbjct: 1387 ----HRIGQTRNVSIYRLISERTIEENILKKATQKRRLGELAID 1426 >gi|154312352|ref|XP_001555504.1| hypothetical protein BC1G_06209 [Botryotinia fuckeliana B05.10] gi|150850172|gb|EDN25365.1| hypothetical protein BC1G_06209 [Botryotinia fuckeliana B05.10] Length = 1096 Score = 93.8 bits (232), Expect = 1e-17, Method: Composition-based stats. Identities = 34/163 (20%), Positives = 65/163 (39%), Gaps = 20/163 (12%) Query: 53 DEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAFPQ----------GRTLDKDPCT 100 K++ ++ +++ K ++ L L++ + G T KD T Sbjct: 663 SGKMQVVKALLQMWKGYGHKTLLFSQGVQMLDILEEFVKKLGGFNYLRMDGGTAVKDRQT 722 Query: 101 I--QEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQ 158 + Q N+ ++ + G G+NL G N ++ F W+ Q ER + Sbjct: 723 LVDQFNNDPEMHVFLLTTKVGGLGVNLT-GANRVIIFDPDWNPSTDVQARERAW-----R 776 Query: 159 AGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 G K+ V +Y L+ TI+E + R K + + +L K+ Sbjct: 777 LGQKKEVTIYRLMTAGTIEEKIYHRQIFKQFLTNKILKDPKQR 819 >gi|50285639|ref|XP_445248.1| hypothetical protein [Candida glabrata CBS 138] gi|49524552|emb|CAG58154.1| unnamed protein product [Candida glabrata] Length = 1115 Score = 93.8 bits (232), Expect = 1e-17, Method: Composition-based stats. Identities = 43/223 (19%), Positives = 86/223 (38%), Gaps = 39/223 (17%) Query: 7 FQRELYCDLQGENIEAFNSAS--------KTVKCLQL---ANGAVYYD--------EEKH 47 Q++ Y + ++I+A N+ S +QL N +D Sbjct: 415 MQKKWYRQILEKDIDAVNADSGSKESKTRLLNIVMQLRKCCNHPYLFDGAEPGPPYTTDE 474 Query: 48 WKEVHDEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQ---------KAFPQGRTLDK 96 + EK+K L+ ++ K + +++ + L L+ G T + Sbjct: 475 HLVYNSEKLKVLDKLLRKLKEAGSRVLIFSQMSRVLDILEDYCYFREYEYCRIDGSTAHE 534 Query: 97 DP-CTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGV 153 D I E+N L + G G+NL +++V F W+ + Q ++R Sbjct: 535 DRIEAIDEYNAPDSKKFLFLLTTRAGGLGINLTT-ADVVVLFDSDWNPQADLQAMDR--- 590 Query: 154 TRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + G K+ V V+ + N+++E +L+R K + L++ Sbjct: 591 --AHRIGQKKQVRVFRFVTDNSVEEKILERATQKLRLDQLVIQ 631 >gi|268571107|ref|XP_002640935.1| C. briggsae CBR-SSL-1 protein [Caenorhabditis briggsae] Length = 1874 Score = 93.8 bits (232), Expect = 1e-17, Method: Composition-based stats. Identities = 24/104 (23%), Positives = 50/104 (48%), Gaps = 7/104 (6%) Query: 94 LDKDPCTIQEWNEG-KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIG 152 +++ ++ +N K+ S G G+NL G + ++F+ W+ Q +R Sbjct: 1268 VEQRQAMMERFNADSKVFCFILSTRSGGVGVNLT-GADTVIFYDSDWNPTMDAQAQDRC- 1325 Query: 153 VTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + G R V +Y LI++ TI+E +L++ K + +L ++ Sbjct: 1326 ----HRIGQTRNVSIYRLISERTIEENILKKATQKRRLGELAID 1365 >gi|46121269|ref|XP_385189.1| hypothetical protein FG05013.1 [Gibberella zeae PH-1] Length = 874 Score = 93.8 bits (232), Expect = 1e-17, Method: Composition-based stats. Identities = 23/141 (16%), Positives = 54/141 (38%), Gaps = 18/141 (12%) Query: 67 NAAPIIVAYHFNSDLARLQK-----------AFPQGRTLDKDPCTIQEWN-EGKIPLLFA 114 +++ F + L L+ D I ++N + + + Sbjct: 652 GGHKVLIFSQFTTQLDILEDYCAELRGWKVCRIDGSVAQDSRRTQIADFNSDPEYKIFLL 711 Query: 115 HPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQN 174 + G G+NL + ++ F ++ ++ Q +R + G R V V+ L ++ Sbjct: 712 STRAGGQGINL-ASADTVILFDSDFNPQQDLQAQDRC-----HRIGQTRPVVVFRLATKD 765 Query: 175 TIDELVLQRLRTKSTIQDLLL 195 T++E +L K ++ L++ Sbjct: 766 TVEESLLNSADAKRRLEKLVI 786 >gi|238501732|ref|XP_002382100.1| SNF2 family helicase/ATPase, putative [Aspergillus flavus NRRL3357] gi|220692337|gb|EED48684.1| SNF2 family helicase/ATPase, putative [Aspergillus flavus NRRL3357] Length = 1158 Score = 93.8 bits (232), Expect = 1e-17, Method: Composition-based stats. Identities = 31/171 (18%), Positives = 67/171 (39%), Gaps = 19/171 (11%) Query: 40 VYYDEEKHWKEV-HDEKIKALEVIIE-KANAAPIIVAYHFNSDLARLQ----------KA 87 +Y + +V KI+ L I+ +++ IV F S L +++ Sbjct: 904 IYLNPGDEDNQVLPSTKIRHLMKILRRESSDYKFIVFSVFTSMLDKIEPFLQRAGIGFAR 963 Query: 88 FPQGRTLDKDPCTIQEW-NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 + G D ++ + N +L + GLNL + +V +W+ +Q Sbjct: 964 YDGGMRNDLREASLNKLRNNSGTRVLLCSLRAGALGLNLT-AASRVVILEPFWNPFVEEQ 1022 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 I+R+ + V +Y LI ++T++E ++ K + ++ + Sbjct: 1023 AIDRV-----HRLNQTVDVKIYKLIIKDTVEERIIDLQERKRELANVTIEG 1068 >gi|189529831|ref|XP_688979.3| PREDICTED: DNA repair and recombination protein RAD54B [Danio rerio] Length = 1174 Score = 93.8 bits (232), Expect = 1e-17, Method: Composition-based stats. Identities = 41/205 (20%), Positives = 79/205 (38%), Gaps = 31/205 (15%) Query: 3 QYHKFQRELYCDLQGENIEAFNSASKTVKCLQLAN--GAVYY---DEEKHWKEVHDEKIK 57 Y +EL+ E S + + K L L + A+ + + H + + Sbjct: 880 MYEGEVKELF---PEEYSTGAFSTADSGKLLVLTDLLSAIQHVNRTDRVVLVSNHTQTLD 936 Query: 58 ALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEG--KIPLLFAH 115 L+ + ++ + Y + RL P G+ + +N LL Sbjct: 937 LLQDVCDQ-------IGYKW----CRLDGQTPVGQ----RQKIVDSFNSPHSSSFLLLLS 981 Query: 116 PASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNT 175 + G GLNL G + LV + + W+ Q + R+ + G K+ V +Y + + Sbjct: 982 SKAGGVGLNL-IGASHLVLYDIDWNPANDIQAMARVW-----RDGQKKTVHIYRFLTTGS 1035 Query: 176 IDELVLQRLRTKSTIQDLLLNALKK 200 I+E + QR +K + +++ KK Sbjct: 1036 IEEKIYQRQVSKQGLSGTVVDLTKK 1060 >gi|295670740|ref|XP_002795917.1| TATA-binding protein-associated factor MOT1 [Paracoccidioides brasiliensis Pb01] gi|226284050|gb|EEH39616.1| TATA-binding protein-associated factor MOT1 [Paracoccidioides brasiliensis Pb01] Length = 1906 Score = 93.8 bits (232), Expect = 1e-17, Method: Composition-based stats. Identities = 37/209 (17%), Positives = 73/209 (34%), Gaps = 30/209 (14%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEV 61 K+Y++ Q+ + + +I A K L D + ++ Sbjct: 1628 KRYNEIQKS--LEAKNSHIRDVAHAPKLSALRDL-----LVDCGIGVDPSTEGELDTGVN 1680 Query: 62 IIEKANAAPIIVAYHFNSDLARLQK-------------AFPQGRTLDKDPCTIQEWN-EG 107 + +V L +Q K + ++N + Sbjct: 1681 YVSP---HRALVFCQMKEMLDIVQNDVFKKLLPSVQYLRLDGSVEATKRQNIVNQFNTDP 1737 Query: 108 KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFV 167 +L + G GLNL G + ++F W+ ++ Q ++R + G K+ V V Sbjct: 1738 SYDVLLLTTSVGGLGLNLT-GADTVIFVEHDWNPQKDIQAMDR-----AHRIGQKKVVNV 1791 Query: 168 YYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 Y LI + T++E +L R K + ++N Sbjct: 1792 YRLITRGTLEEKILNLQRFKIDVASTVVN 1820 >gi|291548670|emb|CBL24932.1| Superfamily II DNA/RNA helicases, SNF2 family [Ruminococcus torques L2-14] Length = 451 Score = 93.8 bits (232), Expect = 1e-17, Method: Composition-based stats. Identities = 37/184 (20%), Positives = 74/184 (40%), Gaps = 26/184 (14%) Query: 19 NIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFN 78 + NS +K + QL + H EK++ L ++E +I+ Y+F Sbjct: 284 ELVGDNSLTKMLYARQLCG------------QWHKEKLEGLRDLVESTEDR-LIIFYNFT 330 Query: 79 SDLARLQKAFPQ----GRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVF 134 ++L +QK ++ + +++ + F + G N Q N +++ Sbjct: 331 AELEAMQKKLADLNRPYSVVNGSKKDLTAYDQADDSITFIQYQAGAMGGNYQK-ANKIIY 389 Query: 135 FSLW---WDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQ 191 F+L + +Q +RI + G + F YYL+ + T++E L L+ + Sbjct: 390 FTLPLGKGSCDMWEQSKKRI-----HRIGQAKPCFYYYLLVKGTVEERNLAALKEGKELT 444 Query: 192 DLLL 195 D L Sbjct: 445 DELF 448 >gi|145602348|ref|XP_359788.2| hypothetical protein MGG_04989 [Magnaporthe oryzae 70-15] gi|145010771|gb|EDJ95427.1| hypothetical protein MGG_04989 [Magnaporthe oryzae 70-15] Length = 1887 Score = 93.8 bits (232), Expect = 1e-17, Method: Composition-based stats. Identities = 27/111 (24%), Positives = 50/111 (45%), Gaps = 7/111 (6%) Query: 87 AFPQGRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQ 145 G +K + ++N + +L + G GLNL G + ++F W+ + Sbjct: 1695 RLDGGVEANKRQDIVNKFNSDPSFDVLLLTTSVGGLGLNLT-GADTVIFVEHDWNPQRDL 1753 Query: 146 QMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 Q ++R + G K+ V VY LI + T++E +L R K + ++N Sbjct: 1754 QAMDR-----AHRIGQKKVVNVYRLITRATLEEKILSLQRFKIDVASTVVN 1799 >gi|312371646|gb|EFR19778.1| hypothetical protein AND_21824 [Anopheles darlingi] Length = 2134 Score = 93.8 bits (232), Expect = 1e-17, Method: Composition-based stats. Identities = 37/184 (20%), Positives = 70/184 (38%), Gaps = 36/184 (19%) Query: 37 NGAVYYDEEKHWKEVHDEKIKALEVII----------EKANAAPIIVAYHFNSDLARL-- 84 NGA D E H K+ L+ ++ N ++ + L L Sbjct: 1840 NGASMDDIE------HSAKLPVLKQLLLDCGIGTNEDVSVNQHRALIFCQLKAMLDILEN 1893 Query: 85 ---QKAFPQGRTLDKDPCT--------IQEWN-EGKIPLLFAHPASCGHGLNLQYGGNIL 132 +K P L D + ++N + I +L G GLNL G + + Sbjct: 1894 DLLKKHLPAVSYLRLDGSVPPSTRHHIVTKFNGDPSIDVLLLTTQVGGLGLNLT-GADTV 1952 Query: 133 VFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQD 192 +F W+ + Q ++R + G K+ V VY LI + +++E ++ + K + Sbjct: 1953 IFVEHDWNPMKDLQAMDR-----AHRIGQKKVVNVYRLITRKSLEEKIMGLQKFKLQTAN 2007 Query: 193 LLLN 196 +++ Sbjct: 2008 TVVS 2011 >gi|297849474|ref|XP_002892618.1| hypothetical protein ARALYDRAFT_471244 [Arabidopsis lyrata subsp. lyrata] gi|297338460|gb|EFH68877.1| hypothetical protein ARALYDRAFT_471244 [Arabidopsis lyrata subsp. lyrata] Length = 1227 Score = 93.8 bits (232), Expect = 1e-17, Method: Composition-based stats. Identities = 23/134 (17%), Positives = 50/134 (37%), Gaps = 17/134 (12%) Query: 68 AAPIIVAYHFNSDLARLQ----------KAFPQGRTLDKDPCTIQEWNE-GKIPLLFAHP 116 IV + L L+ + F T+ ++++N ++ ++ Sbjct: 1072 GEKAIVFTQWTKMLDLLEAGLKSSGIQYRRFDGKMTVPARDAAVRDFNTLPEVSVMIMSL 1131 Query: 117 ASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTI 176 + GLN+ ++ LWW+ Q I+R + G R V V ++T+ Sbjct: 1132 KAASLGLNM-VAACHVIMLDLWWNPTTEDQAIDR-----AHRIGQTRPVKVVRFTVKDTV 1185 Query: 177 DELVLQRLRTKSTI 190 ++ +L + K + Sbjct: 1186 EDRILALQQRKRMM 1199 >gi|307149973|ref|YP_003885357.1| SNF2-like protein [Cyanothece sp. PCC 7822] gi|306980201|gb|ADN12082.1| SNF2-related protein [Cyanothece sp. PCC 7822] Length = 1047 Score = 93.8 bits (232), Expect = 1e-17, Method: Composition-based stats. Identities = 21/109 (19%), Positives = 40/109 (36%), Gaps = 8/109 (7%) Query: 91 GRTLDKDPCTIQEWNEGKI--PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMI 148 + I + P+ + G GLNL N + WW+ Q Sbjct: 918 ATPRQQRQEMIDRFQNDPAGPPIFILSLKAGGTGLNLTR-ANHVFHIDRWWNPAVENQAT 976 Query: 149 ERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 +R + G K+ V V+ I T++E + + +K + + ++A Sbjct: 977 DR-----AFRIGQKQNVQVHKFICTGTLEEKINDMIESKKQLAEQTVDA 1020 >gi|71004894|ref|XP_757113.1| hypothetical protein UM00966.1 [Ustilago maydis 521] gi|46096494|gb|EAK81727.1| hypothetical protein UM00966.1 [Ustilago maydis 521] Length = 1124 Score = 93.8 bits (232), Expect = 1e-17, Method: Composition-based stats. Identities = 34/151 (22%), Positives = 58/151 (38%), Gaps = 25/151 (16%) Query: 66 ANAAPIIVAY------HFN--------SDLARLQKAFPQGRTLDKDPCTIQEWN-EGKIP 110 AN +++ F + RL PQ R + ++N + I Sbjct: 700 ANGDKVLLFSTNLRLLQFIEFFLSREGHNFLRLDGTTPQPR----RQQLVNQFNRDASIF 755 Query: 111 LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYL 170 + + G GLNL N +V F W+ Q ++R + G R V+VY L Sbjct: 756 VFLISTTAGGTGLNLT-SANRVVVFDPHWNPSHDLQAMDR-----AYRFGQSRDVYVYRL 809 Query: 171 IAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 I +++E++ R K ++ NA K+ Sbjct: 810 IGAGSLEEVIYGRQIYKQQQMEIGYNATKER 840 >gi|254582697|ref|XP_002499080.1| ZYRO0E03190p [Zygosaccharomyces rouxii] gi|238942654|emb|CAR30825.1| ZYRO0E03190p [Zygosaccharomyces rouxii] Length = 1052 Score = 93.8 bits (232), Expect = 1e-17, Method: Composition-based stats. Identities = 35/193 (18%), Positives = 69/193 (35%), Gaps = 29/193 (15%) Query: 32 CLQLANGAVYYDEEKHWKEVH------DEKIKALEVIIE--KANAAPIIVAYHFNSDLAR 83 ++ N D ++ KE K++ ++ ++ + ++ L Sbjct: 604 LRKICNHPDLLDRDERSKEASYGDPKRSGKMQVVKQLLLLWRKEGHKALLFTQSRQMLDI 663 Query: 84 LQK---------------AFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYG 128 LQ+ T+ + E+N G + G G+NL G Sbjct: 664 LQEFIAFKDQELTGLKFLRMDGTTTISIRQSLVDEFNRGDYNVFLLTTRVGGIGVNLT-G 722 Query: 129 GNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKS 188 N ++ F W+ Q ER + G KR V +Y L+ +I+E + R K Sbjct: 723 ANRIIIFDPDWNPSTDMQARERAW-----RIGQKREVSIYRLMVTGSIEEKIYHRQIFKQ 777 Query: 189 TIQDLLLNALKKE 201 + + +L+ K++ Sbjct: 778 FLTNKILSDPKQK 790 >gi|221117281|ref|XP_002154909.1| PREDICTED: similar to predicted protein, partial [Hydra magnipapillata] Length = 765 Score = 93.8 bits (232), Expect = 1e-17, Method: Composition-based stats. Identities = 26/157 (16%), Positives = 63/157 (40%), Gaps = 19/157 (12%) Query: 52 HDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQ-KAFPQG----------RTLDKDP 98 K+ L+ I+ +N +++ + LQ + +G LD+ Sbjct: 538 TSGKMLLLDKILPALKSNGHKVLIFSQMTQMMDILQDYCYLRGYGYCRIDGTMSVLDRQE 597 Query: 99 CTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQ 158 + ++ ++ + + G GLNL + + + W+ + Q +R + Sbjct: 598 NIKKFTDDKELFIFLLSTRAGGLGLNLMM-ADTCIIYDSDWNPQVDLQAQDRC-----HR 651 Query: 159 AGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 G + V +Y + NTID+ +++R K ++ +++ Sbjct: 652 IGQTKPVVIYRFVTANTIDQKIIERAACKRKLEKMVI 688 >gi|123493351|ref|XP_001326267.1| SNF2 family N-terminal domain containing protein [Trichomonas vaginalis G3] gi|121909179|gb|EAY14044.1| SNF2 family N-terminal domain containing protein [Trichomonas vaginalis G3] Length = 1325 Score = 93.8 bits (232), Expect = 1e-17, Method: Composition-based stats. Identities = 20/142 (14%), Positives = 53/142 (37%), Gaps = 17/142 (11%) Query: 67 NAAPIIVAYHFNSDLARLQK----------AFPQGRTLDKDPCTIQEWNE-GKIPLLFAH 115 +++ L +Q+ ++++ +I+ + + Sbjct: 523 GGHKVLIFSQMTKVLDIIQRFLDWRNFHYERLDGSVSVERRSESIERFTTFDDSFVFLLS 582 Query: 116 PASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNT 175 + G G+NL + ++ + W+ + Q + R + G + V VY LI +N+ Sbjct: 583 TRAGGQGINLTV-ADTVIIYDSDWNPQNDIQAMARC-----HRIGQDKEVKVYRLITKNS 636 Query: 176 IDELVLQRLRTKSTIQDLLLNA 197 +E + +R K + ++ + Sbjct: 637 YEEEMFERASMKLGLDKVITDG 658 >gi|156043545|ref|XP_001588329.1| hypothetical protein SS1G_10776 [Sclerotinia sclerotiorum 1980] gi|154695163|gb|EDN94901.1| hypothetical protein SS1G_10776 [Sclerotinia sclerotiorum 1980 UF-70] Length = 1086 Score = 93.8 bits (232), Expect = 1e-17, Method: Composition-based stats. Identities = 39/226 (17%), Positives = 82/226 (36%), Gaps = 43/226 (19%) Query: 6 KFQRELYCDLQGENIEAFNSAS--------KTVKCLQLAN-------------GAVYYDE 44 Q + Y + ++I+A N A +QL G Y + Sbjct: 427 DMQVKWYKKILEKDIDAVNGAGGKRESKTRLLNIVMQLRKCCNHPYLFEGAEPGPPYTTD 486 Query: 45 EKHWKEVHDEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQK----------AFPQGR 92 E + K+ L+ ++ + + +++ + L L+ G Sbjct: 487 EHLI--FNAGKMVMLDKLLTRMKKAGSRVLIFSQMSRLLDILEDYCVFREFKYCRIDGGT 544 Query: 93 TLDKDPCTIQEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 + I ++N+ + + + G G+NL +I+V + W+ + Q ++R Sbjct: 545 AHEDRIQAIDDYNKPGSEKFVFLLTTRAGGLGINLT-SADIVVLYDSDWNPQADLQAMDR 603 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + G + V VY + +N I+E VL+R K + L++ Sbjct: 604 -----AHRIGQTKQVVVYRFVTENAIEEKVLERAAQKLRLDQLVIQ 644 >gi|74694070|sp|Q759G7|SWR1_ASHGO RecName: Full=Helicase SWR1 Length = 1486 Score = 93.8 bits (232), Expect = 1e-17, Method: Composition-based stats. Identities = 29/166 (17%), Positives = 70/166 (42%), Gaps = 19/166 (11%) Query: 44 EEKHWKEVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQKAF---------PQGR 92 +K + K+++L V++ + ++ L L++ G Sbjct: 1207 PDKSLLQYDCGKLQSLAVLLRRLKEEGHRALIFTQMTKVLDILEQFLNYHGYLYMRLDGA 1266 Query: 93 TLDKDPCTI-QEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 T +D + + +N + +I + S G G+NL G + ++F+ W+ +Q +R Sbjct: 1267 TKIEDRQILTERFNTDPRITVFILSSRSGGLGINLT-GADTVIFYDSDWNPAMDKQCQDR 1325 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + G R V +Y +++TI+ +L++ K + ++++ Sbjct: 1326 C-----HRIGQTRDVHIYRFASEHTIESNILKKANQKRQLDNIVIQ 1366 >gi|237837185|ref|XP_002367890.1| SNF2 family helicase, putative [Toxoplasma gondii ME49] gi|211965554|gb|EEB00750.1| SNF2 family helicase, putative [Toxoplasma gondii ME49] gi|221509350|gb|EEE34919.1| helicase, putative [Toxoplasma gondii VEG] Length = 1167 Score = 93.8 bits (232), Expect = 1e-17, Method: Composition-based stats. Identities = 23/154 (14%), Positives = 56/154 (36%), Gaps = 21/154 (13%) Query: 52 HDEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQ-----------KAFPQGRTLDKDP 98 KI+ + ++ + ++ + + L ++ K G T +D Sbjct: 986 DSAKIRKMIELVSEIKKKGEKALIFSQYTTYLDVVEESLTTFCGDIGKCRLDGSTAVEDR 1045 Query: 99 CT-IQEW-NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 + ++ + + + G GLNL ++ W+ + +R R Sbjct: 1046 QALVDDFSTNPDLTIFLLSTKAGGQGLNLT-AARTVILMDQDWNPQ-----NDRQAEDRV 1099 Query: 157 RQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 + G + V +Y L + T++E +L+ + K + Sbjct: 1100 HRLGQTQDVTIYRLCCRGTVEESILKCCQAKLDL 1133 >gi|119499890|ref|XP_001266702.1| SNF2 family helicase/ATPase, putative [Neosartorya fischeri NRRL 181] gi|119414867|gb|EAW24805.1| SNF2 family helicase/ATPase, putative [Neosartorya fischeri NRRL 181] Length = 1141 Score = 93.8 bits (232), Expect = 1e-17, Method: Composition-based stats. Identities = 41/231 (17%), Positives = 87/231 (37%), Gaps = 43/231 (18%) Query: 6 KFQRELYCDLQGENIEAFNSAS--------KTVKCLQLAN-------------GAVYYDE 44 + Q + Y + ++I+A N A+ +QL G Y + Sbjct: 454 EMQVKWYQKILEKDIDAVNGAAGKRESKTRLLNIVMQLRKCCNHPYLFEGAEPGPPYTTD 513 Query: 45 EKHWKEVHDEKIKALEVIIEKAN--AAPIIVAYHFNSDLARL---------QKAFPQGRT 93 E + K+ L+ ++ + + +++ + L L + G T Sbjct: 514 EHLV--YNSGKMVILDKLLARMQQQGSRVLIFSQMSRVLDILEDYCVFRDYKYCRIDGTT 571 Query: 94 LDKDP-CTIQEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 +D I E+N+ + + G G+NL +I+V + W+ + Q ++R Sbjct: 572 AHEDRIAAIDEYNKPGSDKFIFLLTTRAGGLGINLTT-ADIVVLYDSDWNPQADLQAMDR 630 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 + G + V V+ + +N I+E VL+R K + L++ + + Sbjct: 631 -----AHRIGQTKQVVVFRFVTENAIEEKVLERAAQKLRLDQLVIQQGRAQ 676 >gi|294953115|ref|XP_002787602.1| chromodomain helicase dna binding protein, putative [Perkinsus marinus ATCC 50983] gi|239902626|gb|EER19398.1| chromodomain helicase dna binding protein, putative [Perkinsus marinus ATCC 50983] Length = 1191 Score = 93.8 bits (232), Expect = 1e-17, Method: Composition-based stats. Identities = 31/199 (15%), Positives = 58/199 (29%), Gaps = 46/199 (23%) Query: 43 DEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTL------ 94 D K+ LE +I+K A ++V F L + Sbjct: 816 DAINQLLVSASGKMVFLEKLIDKLLAEGEKVLVFSQFTMQLDIIDDYLRARGVRFERLDG 875 Query: 95 ----DKDPCTIQEWNEGKIP----------------------------LLFAHPASCGHG 122 + +N + + G G Sbjct: 876 NVSAGDRQEAVDRFNRSTPSPSPSPSVSPSPEDEANDGVVGVDDFSSMVFLLSTKAGGVG 935 Query: 123 LNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQ 182 LNL ++ V F W+ + Q + R + G + V VY L+ +NT +E + Sbjct: 936 LNL-CAASVAVIFDSDWNPQNDLQAMARC-----HRIGQVKNVQVYRLLTRNTYEERMFA 989 Query: 183 RLRTKSTIQDLLLNALKKE 201 K ++ +++ L+ Sbjct: 990 VASHKLALERAVMSGLEAR 1008 >gi|254571325|ref|XP_002492772.1| Putative ATPase containing the DEAD/H helicase-related sequence motif [Pichia pastoris GS115] gi|238032570|emb|CAY70593.1| Putative ATPase containing the DEAD/H helicase-related sequence motif [Pichia pastoris GS115] gi|328353220|emb|CCA39618.1| hypothetical protein PP7435_Chr3-0661 [Pichia pastoris CBS 7435] Length = 805 Score = 93.8 bits (232), Expect = 1e-17, Method: Composition-based stats. Identities = 27/170 (15%), Positives = 67/170 (39%), Gaps = 25/170 (14%) Query: 53 DEKIKALEVIIEKA---------NAAPIIVAYHFNSDLARLQ----------KAFPQGRT 93 K++ L ++ + +++ F + ++ + Sbjct: 555 SSKMQMLAQLLPRLLDSKKSPDGKKHKVLIFCQFTKMMDLVEMWCQEENYSTYRIDGTTS 614 Query: 94 LDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGV 153 ++ ++ + I + S G G+NL + ++ F W+ + Q I+R+ Sbjct: 615 QEERAGMVKGFATKDIDIFLLSTRSGGLGINLT-ASDTVILFDSDWNPQVDLQAIDRV-- 671 Query: 154 TRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETI 203 + G + V +Y L NTI++++L R +K ++ L+++ K T+ Sbjct: 672 ---HRIGQTQPVIIYRLCNINTIEQVLLARADSKRRLERLVISMGKFSTL 718 >gi|47213833|emb|CAG00637.1| unnamed protein product [Tetraodon nigroviridis] Length = 4522 Score = 93.8 bits (232), Expect = 1e-17, Method: Composition-based stats. Identities = 23/101 (22%), Positives = 46/101 (45%), Gaps = 7/101 (6%) Query: 98 PCTIQEWNEG-KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 ++ +N +I S G G+NL G + ++F+ W+ Q +R Sbjct: 2942 QALMERFNADQRIFCFILSTRSGGVGVNLT-GADTVIFYDSDWNPTMDAQAQDRC----- 2995 Query: 157 RQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + G R V +Y LI++ T++E +L++ K + D+ + Sbjct: 2996 HRIGQTRDVHIYRLISERTVEENILKKANQKRMLGDMAIEG 3036 >gi|145255017|ref|XP_001398836.1| TBP associated factor (Mot1) [Aspergillus niger CBS 513.88] gi|134084423|emb|CAK97415.1| unnamed protein product [Aspergillus niger] Length = 1895 Score = 93.8 bits (232), Expect = 1e-17, Method: Composition-based stats. Identities = 33/163 (20%), Positives = 65/163 (39%), Gaps = 18/163 (11%) Query: 35 LANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTL 94 L GA Y + ++K + I++ ++ + + G Sbjct: 1667 LGTGASYVSPHRALVF---CQMKEMLDIVQSEVLRKLLPSVQYL--------RLDGGVEA 1715 Query: 95 DKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGV 153 K + +N + +L + G GLNL G + ++F W+ ++ Q ++R Sbjct: 1716 TKRQDIVNRFNSDPSYDVLLLTTSVGGLGLNLT-GADTVIFVEHDWNPQKDIQAMDR--- 1771 Query: 154 TRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + G K+ V VY LI + T++E +L R K + ++N Sbjct: 1772 --AHRIGQKKVVNVYRLITRGTLEEKILNLQRFKIDVASTVVN 1812 >gi|195395955|ref|XP_002056599.1| GJ10137 [Drosophila virilis] gi|194143308|gb|EDW59711.1| GJ10137 [Drosophila virilis] Length = 1061 Score = 93.8 bits (232), Expect = 1e-17, Method: Composition-based stats. Identities = 34/161 (21%), Positives = 64/161 (39%), Gaps = 21/161 (13%) Query: 52 HDEKIKALEVIIEKA---NAAPIIVAYHFNSDLARLQKAFPQGRT----------LDKDP 98 K+ + I++ + IV + S L L + R + Sbjct: 890 PSSKMLKVLEILKTNVLKSKDKAIVVSQWTSVLDILGDLLEKERLQTLSLNGAIPVKNRQ 949 Query: 99 CTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 + E+N+ + P +L + G GLNL G N L+ F L W+ + Q +RI Sbjct: 950 DIVNEFNDERNPKRILLLSLTAGGVGLNL-IGANHLILFDLHWNPQLEAQAQDRI----- 1003 Query: 157 RQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + G K+ V +Y ++ +T+++ + K + D +L Sbjct: 1004 YRVGQKKDVIIYKIVCLDTVEQRIKALQDRKLELADGVLTG 1044 >gi|164659175|ref|XP_001730712.1| hypothetical protein MGL_2166 [Malassezia globosa CBS 7966] gi|159104609|gb|EDP43498.1| hypothetical protein MGL_2166 [Malassezia globosa CBS 7966] Length = 838 Score = 93.8 bits (232), Expect = 1e-17, Method: Composition-based stats. Identities = 32/160 (20%), Positives = 57/160 (35%), Gaps = 22/160 (13%) Query: 52 HDEKIKALEVIIEKANAAP-----IIVAYHFNSDLARLQKAFPQGR----------TLDK 96 KI+AL + P +V F + L + + T D Sbjct: 664 SSTKIEALVEELTHLREQPDRTIKSLVFSQFVNFLDLIAFRLQRAGFRICRLEGNMTPDA 723 Query: 97 DPCTIQEW-NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTR 155 TI+ + I + + G LNL + + WW+ Q ++RI Sbjct: 724 RDRTIRLFMENPGITVFLVSLKAGGVALNLTE-ASRVYLMDPWWNPAVEVQAMDRI---- 778 Query: 156 QRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 + G R + V +I +N+I+ +++ KS + D L Sbjct: 779 -HRLGQHRPIVVKRMIIENSIESRIIELQNKKSAMVDAAL 817 >gi|156097857|ref|XP_001614961.1| helicase [Plasmodium vivax SaI-1] gi|148803835|gb|EDL45234.1| helicase, putative [Plasmodium vivax] Length = 1795 Score = 93.8 bits (232), Expect = 1e-17, Method: Composition-based stats. Identities = 27/163 (16%), Positives = 64/163 (39%), Gaps = 19/163 (11%) Query: 47 HWKEVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQK----------AFPQGRTL 94 + K+ ALE ++ K ++ F L L+ + Sbjct: 1392 KDITLGSGKLFALEKLLNKCKREGNKCLLFTQFIKMLDILEVFLNHLNYTFIRLDGSTKV 1451 Query: 95 DKDPCTIQEWNEGK-IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGV 153 ++ + ++N K I L + S G+NL N+++F+ W+ +Q ++R Sbjct: 1452 EQRQKIVTKFNNDKSIFLFISSTRSGSIGINLT-AANVVIFYDTDWNPSIDKQAMDRC-- 1508 Query: 154 TRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + G + V V+ + + T++E + ++ K + + ++ Sbjct: 1509 ---HRIGQTKDVHVFRFVCEYTVEENIWKKQLQKRKLDTICIS 1548 >gi|62088588|dbj|BAD92741.1| excision repair cross-complementing rodent repair deficiency, complementation group 6 variant [Homo sapiens] Length = 870 Score = 93.8 bits (232), Expect = 1e-17, Method: Composition-based stats. Identities = 36/172 (20%), Positives = 63/172 (36%), Gaps = 21/172 (12%) Query: 43 DEEKHWKEVHDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQK----------AFPQ 90 D+ +WK K+ +E +++ +++ L L+ Sbjct: 207 DQFGYWKR--SGKMIVVESLLKIWHKQGQRVLLFSQSRQMLDILEVFLRAQKYTYLKMDG 264 Query: 91 GRTLDKDPCTIQEWNEG-KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIE 149 T+ I +NE I + G G+NL G N +V + W+ Q E Sbjct: 265 TTTIASRQPLITRYNEDTSIFVFLLTTRVGGLGVNLT-GANRVVIYDPDWNPSTDTQARE 323 Query: 150 RIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 R + G K+ V VY L+ TI+E + R K + + +L K+ Sbjct: 324 RAW-----RIGQKKQVTVYRLLTAGTIEEKIYHRQIFKQFLTNRVLKDPKQR 370 >gi|145488703|ref|XP_001430355.1| hypothetical protein [Paramecium tetraurelia strain d4-2] gi|124397452|emb|CAK62957.1| unnamed protein product [Paramecium tetraurelia] Length = 1100 Score = 93.8 bits (232), Expect = 1e-17, Method: Composition-based stats. Identities = 33/155 (21%), Positives = 63/155 (40%), Gaps = 18/155 (11%) Query: 55 KIKALEVIIEK--ANAAPIIVAYHFNSDLA---------RLQKAFPQGRT-LDKDPCTIQ 102 K+ L +I K + II+ L ++ G T ++ ++ Sbjct: 770 KMNTLVSLIYKLKSQNHKIIIFTQMTKMLDLFEAVLSLSKISYLRLDGSTPVEMRQKIVE 829 Query: 103 EWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFK 162 +N+ I + S G GLNL G + ++F+ W+ +Q +R + G Sbjct: 830 SFNQLNITCFISSTRSGGIGLNLT-GADTVIFYDTDWNPAMDKQAQDRC-----HRIGQV 883 Query: 163 RAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 R V +Y LI +TI+E + + K + D ++ + Sbjct: 884 RPVTIYRLITNSTIEENIFLKSLQKRQLDDFVMQS 918 >gi|189198415|ref|XP_001935545.1| ISWI chromatin-remodeling complex ATPase ISW2 [Pyrenophora tritici-repentis Pt-1C-BFP] gi|187981493|gb|EDU48119.1| ISWI chromatin-remodeling complex ATPase ISW2 [Pyrenophora tritici-repentis Pt-1C-BFP] Length = 916 Score = 93.8 bits (232), Expect = 1e-17, Method: Composition-based stats. Identities = 26/143 (18%), Positives = 54/143 (37%), Gaps = 21/143 (14%) Query: 68 AAPIIVAYHFNSDLARL---------QKAFPQGRTLDKDPC-TIQEWNEGKI-----PLL 112 +++ F + L L A G D I +N+ + Sbjct: 684 GHKVLIFSQFTTTLDLLGHYLDLRSWNYARIDGSVAQTDRQEQILAFNKPSTTKEAADIF 743 Query: 113 FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIA 172 + G G+NL + ++ F W+ ++ Q ++R + G R V VY Sbjct: 744 ILSTRAGGQGINL-AAADTVILFDSDWNPQQDLQAMDR-----AHRIGQTRNVIVYRFAT 797 Query: 173 QNTIDELVLQRLRTKSTIQDLLL 195 +NT+++ +L+ K ++ L++ Sbjct: 798 RNTVEQKLLESAEAKRRLEKLVI 820 >gi|270003081|gb|EEZ99528.1| hypothetical protein TcasGA2_TC000110 [Tribolium castaneum] Length = 863 Score = 93.8 bits (232), Expect = 1e-17, Method: Composition-based stats. Identities = 44/201 (21%), Positives = 77/201 (38%), Gaps = 20/201 (9%) Query: 16 QGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEK--ANAAPIIV 73 + E A N A++ V + + G + E KI+AL +++ + IV Sbjct: 653 EEEPRVAANLANEGVGLKEASKGYLNPTNPVFMTERPSSKIRALINLLKNKISGEDKAIV 712 Query: 74 AYHFNSDLARLQ----------KAFPQGRTLDKDPCTIQEWNEGK--IPLLFAHPASCGH 121 + S L + + + K + +N+ +L + G Sbjct: 713 VSQWTSLLHLVAIHLENEGIPYASLDGSVVVQKRMPIVDNFNDPNSATKVLLLSLTAGGV 772 Query: 122 GLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVL 181 GLNL G N L L W+ + Q +RI + G K+ ++VY +A TI+E + Sbjct: 773 GLNL-VGANHLFLLDLHWNPQLENQAQDRI-----YRMGQKKDIYVYKFMALETIEERIK 826 Query: 182 QRLRTKSTIQDLLLNALKKET 202 K I + +L K+ T Sbjct: 827 ALQERKLEIANAMLTGSKQVT 847 >gi|145233919|ref|XP_001400332.1| SNF2 family helicase/ATPase [Aspergillus niger CBS 513.88] gi|134057271|emb|CAK37885.1| unnamed protein product [Aspergillus niger] Length = 1123 Score = 93.8 bits (232), Expect = 1e-17, Method: Composition-based stats. Identities = 34/162 (20%), Positives = 65/162 (40%), Gaps = 19/162 (11%) Query: 46 KHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFP---------QGRTL 94 K+ + + K+ L ++++ N +V F + L+ GRT Sbjct: 933 KNNEWMDSGKVDKLCDLLKRFKENGDRALVFSQFTLVMDILEHVLENQHIGFVRLDGRTN 992 Query: 95 DKDPCTI-QEWNEG-KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIG 152 +D +I ++E IP+ + G G+NL N ++ F ++ +E Q Sbjct: 993 VEDRQSILDAFHERTDIPVFLLSTKAGGAGINL-ACANKVIIFDSSFNPQEDVQA----- 1046 Query: 153 VTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 R + G R V V L+ + TI+E + +TK + + Sbjct: 1047 ENRAHRVGQTRDVEVIRLVTKGTIEEQIYALGQTKLALDQAV 1088 >gi|310789538|gb|EFQ25071.1| SNF2 family domain-containing protein [Glomerella graminicola M1.001] Length = 1153 Score = 93.8 bits (232), Expect = 1e-17, Method: Composition-based stats. Identities = 28/147 (19%), Positives = 52/147 (35%), Gaps = 18/147 (12%) Query: 68 AAPIIVAYHFNSDLARLQKAFPQGRTLD-----------KDPCTIQEWN-EGKIPLLFAH 115 ++ L LQ+ + ++ K I +N + I + Sbjct: 734 GHKTLLFSQTKIMLDILQEFIGKMEGMNYLRMDGEVAVEKRQALIDRFNHDPSIHVFLLT 793 Query: 116 PASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNT 175 + G G+NL G +V + W+ Q ER + G + V +Y L+ T Sbjct: 794 TKTGGLGVNLT-GATRIVIYDPDWNPSTDLQARERAW-----RLGQTKPVAIYRLMTSGT 847 Query: 176 IDELVLQRLRTKSTIQDLLLNALKKET 202 I+E + R K + + +L K+ Sbjct: 848 IEEKIYHRQIFKQFMTNKVLKDPKQRA 874 >gi|194381160|dbj|BAG64148.1| unnamed protein product [Homo sapiens] Length = 863 Score = 93.8 bits (232), Expect = 1e-17, Method: Composition-based stats. Identities = 36/172 (20%), Positives = 63/172 (36%), Gaps = 21/172 (12%) Query: 43 DEEKHWKEVHDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQK----------AFPQ 90 D+ +WK K+ +E +++ +++ L L+ Sbjct: 200 DQFGYWKR--SGKMIVVESLLKIWHKQGQRVLLFSQSRQMLDILEVFLRAQKYTYLKMDG 257 Query: 91 GRTLDKDPCTIQEWNEG-KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIE 149 T+ I +NE I + G G+NL G N +V + W+ Q E Sbjct: 258 TTTIASRQPLITRYNEDTSIFVFLLTTRVGGLGVNLT-GANRVVIYDPDWNPSTDTQARE 316 Query: 150 RIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 R + G K+ V VY L+ TI+E + R K + + +L K+ Sbjct: 317 RAW-----RIGQKKQVTVYRLLTAGTIEEKIYHRQIFKQFLTNRVLKDPKQR 363 >gi|297847386|ref|XP_002891574.1| SNF2 domain-containing protein [Arabidopsis lyrata subsp. lyrata] gi|297337416|gb|EFH67833.1| SNF2 domain-containing protein [Arabidopsis lyrata subsp. lyrata] Length = 980 Score = 93.8 bits (232), Expect = 1e-17, Method: Composition-based stats. Identities = 22/139 (15%), Positives = 52/139 (37%), Gaps = 19/139 (13%) Query: 65 KANAAPI--IVAYHFNSDLARLQKAFPQ-----------GRTLDKDPCTIQEWNEGKIPL 111 +N P+ I+ + L ++ + + + +D + N+ + + Sbjct: 820 PSNQGPVKTIIFSQWTGMLDLVELSLIENSIEFRRLDGTMSLIARDRAVKEFSNDPDVKV 879 Query: 112 LFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLI 171 + + GLN+ ++ LWW+ Q I+R + G R V V + Sbjct: 880 MIMSLKAGNLGLNM-IAACHVILLDLWWNPTTEDQAIDR-----AHRIGQTRPVTVTRIT 933 Query: 172 AQNTIDELVLQRLRTKSTI 190 ++T+++ +L K + Sbjct: 934 IKDTVEDRILSLQEEKRKM 952 >gi|326429518|gb|EGD75088.1| Rad54b protein [Salpingoeca sp. ATCC 50818] Length = 1070 Score = 93.8 bits (232), Expect = 1e-17, Method: Composition-based stats. Identities = 40/202 (19%), Positives = 75/202 (37%), Gaps = 34/202 (16%) Query: 7 FQRELYCDLQG----ENIEAFNSASKTVKCLQLANGAVYY------DEEKHWKEVHDEKI 56 F R+L + G ++ S K +QL + + + +E + + Sbjct: 676 FVRDLMVEELGRPALSTLDDVEDVSLCGK-MQLLSHMLQHWRAHPANERVLIVSNSTKVL 734 Query: 57 KALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEG--KIPLLFA 114 ++ + E+ AY F RLQ P K + +N + Sbjct: 735 SRVQALCEQ-------CAYPFL----RLQGNTPT----HKRLELVNRFNSRVRDDFVFLM 779 Query: 115 HPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQN 174 + G GLN+ G + L+ + W+ Q + R+ + G KR V+VY + Sbjct: 780 SSKAGGVGLNI-VGASRLILYDTDWNPANDLQAMARVW-----RDGQKRHVYVYRFLTTG 833 Query: 175 TIDELVLQRLRTKSTIQDLLLN 196 TI+E + QR K + +++ Sbjct: 834 TIEEKIYQRQVHKQGLSGSVVD 855 >gi|330935743|ref|XP_003305110.1| hypothetical protein PTT_17857 [Pyrenophora teres f. teres 0-1] gi|311318056|gb|EFQ86823.1| hypothetical protein PTT_17857 [Pyrenophora teres f. teres 0-1] Length = 2332 Score = 93.8 bits (232), Expect = 1e-17, Method: Composition-based stats. Identities = 29/166 (17%), Positives = 67/166 (40%), Gaps = 19/166 (11%) Query: 44 EEKHWKEVHDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAF---------PQGR 92 +K + K++ L ++ +A ++ L L++ G Sbjct: 1360 PDKRLLQYDCGKLQRLATLLRDLQAGGHRALIFTQMTKVLDILEQFLNIHGYRYLRLDGS 1419 Query: 93 TLDKDPCTI-QEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 T + + +N + +I S G G+NL G + ++F+ L W+ +++ Sbjct: 1420 TKIEQRQILTDRFNTDPRILCFILSSRSGGLGINLT-GADSVIFYDLDWN-----PAMDK 1473 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 R + G R V +Y +++ TI+ +L++ K + D+++ Sbjct: 1474 QCQDRAHRIGQTRDVHIYKFVSEYTIEANILRKSNQKRLLDDVIIQ 1519 >gi|67538946|ref|XP_663247.1| hypothetical protein AN5643.2 [Aspergillus nidulans FGSC A4] gi|40743546|gb|EAA62736.1| hypothetical protein AN5643.2 [Aspergillus nidulans FGSC A4] gi|259484887|tpe|CBF81492.1| TPA: SNF2 family helicase/ATPase, putative (AFU_orthologue; AFUA_4G13460) [Aspergillus nidulans FGSC A4] Length = 1111 Score = 93.8 bits (232), Expect = 1e-17, Method: Composition-based stats. Identities = 43/230 (18%), Positives = 86/230 (37%), Gaps = 43/230 (18%) Query: 7 FQRELYCDLQGENIEAFNSAS--------KTVKCLQL-------------ANGAVYYDEE 45 Q + Y + ++I+A N A +QL G Y ++ Sbjct: 431 MQVKWYQKILEKDIDAVNGAGGKKESKTRLLNIVMQLRKCCNHPYLFEGAEEGPPYTNDV 490 Query: 46 KHWKEVHDEKIKALEVIIE--KANAAPIIVAYHFNSDLARL---------QKAFPQGRTL 94 + K+ L+ ++ +A + +++ + L L Q G T Sbjct: 491 HIIN--NSGKMVILDKLLARMQAQGSRVLIFSQMSRVLDILEDYCALRKYQYCRIDGTTA 548 Query: 95 DKDP-CTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERI 151 +D I E+N+ + + G G+NL +I+V + W+ + Q ++R Sbjct: 549 HEDRIAAIDEYNKPDSDKFIFLLTTRAGGLGINLTT-ADIVVLYDSDWNPQADLQAMDR- 606 Query: 152 GVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 + G + V VY I ++ I+E VL+R K + L++ + + Sbjct: 607 ----AHRIGQTKQVVVYRFITESAIEERVLERAAQKLRLDQLVIQQGRAQ 652 >gi|320170477|gb|EFW47376.1| conserved hypothetical protein [Capsaspora owczarzaki ATCC 30864] Length = 1345 Score = 93.8 bits (232), Expect = 1e-17, Method: Composition-based stats. Identities = 27/158 (17%), Positives = 53/158 (33%), Gaps = 19/158 (12%) Query: 52 HDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQK----------AFPQGRTLDKDPC 99 K+ L + E + +++ L +Q+ T + Sbjct: 632 ASVKLSFLTTLCENLKQDGHRVLIFSQSTRMLDLIQEVLTYQKYSLIRIDGSVTGHERQH 691 Query: 100 TIQEWNEGK-IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQ 158 I ++N I G G+ L + ++ W+ Q ++R + Sbjct: 692 RIDKFNTDDSIFGFLLTTQVGGVGITLT-SADRVIIVDPSWNPAIDTQAVDR-----AYR 745 Query: 159 AGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 G R V +Y LI TI+E + R KS ++++ Sbjct: 746 IGQTRNVVIYRLITCGTIEEKIYCRQVYKSDFSHVMID 783 >gi|297821893|ref|XP_002878829.1| PKL/SSL2 [Arabidopsis lyrata subsp. lyrata] gi|297324668|gb|EFH55088.1| PKL/SSL2 [Arabidopsis lyrata subsp. lyrata] Length = 1399 Score = 93.8 bits (232), Expect = 1e-17, Method: Composition-based stats. Identities = 37/189 (19%), Positives = 65/189 (34%), Gaps = 31/189 (16%) Query: 30 VKCLQLANGAVYYDEEKHWKEVHDEK---IKALEVIIEKANAAPIIVAYHFNSDLARLQ- 85 K L V E+ H ++ + + LE Y F L L+ Sbjct: 595 GKLQLLDKMMVKLKEQGHRVLIYTQFQHMLDLLEDYCS----------YKFQHMLDLLED 644 Query: 86 ----KAFPQGRTLDKDPCT-----IQEWN--EGKIPLLFAHPASCGHGLNLQYGGNILVF 134 K + R K I +N + G G+NL + ++ Sbjct: 645 YCSYKKWNYERIDGKVGGAERQIRIDRFNAKNSNKFCFLLSTRAGGLGINL-ATADTVII 703 Query: 135 FSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 + W+ Q + R + G V +Y LI + TI+E ++Q + K ++ L+ Sbjct: 704 YDSDWNPHADLQAMAR-----AHRLGQTNKVMIYRLINRGTIEERMMQLTKKKMVLEHLV 758 Query: 195 LNALKKETI 203 + LK + I Sbjct: 759 VGKLKTQNI 767 >gi|320038286|gb|EFW20222.1| helicase SWR1 [Coccidioides posadasii str. Silveira] Length = 1905 Score = 93.8 bits (232), Expect = 1e-17, Method: Composition-based stats. Identities = 39/209 (18%), Positives = 73/209 (34%), Gaps = 30/209 (14%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEV 61 +QY + QR Y + NI + A K L D + ++ Sbjct: 1627 RQYQEVQR--YLANKNSNIRDISHAPKLTALRDL-----LIDCGIGVDPSAEGELNTAAS 1679 Query: 62 IIEKANAAPIIVAYHFNSDLARLQK-------------AFPQGRTLDKDPCTIQEWN-EG 107 + ++ L +Q K + ++N + Sbjct: 1680 YVSP---HRALIFCQMKEMLDIVQNDVLKKLLPSIQYLRLDGSVEATKRQNIVNQFNTDP 1736 Query: 108 KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFV 167 +L + G GLNL G + ++F W+ ++ Q ++R + G K+ V V Sbjct: 1737 SYDVLLLTTSVGGLGLNLT-GADTVIFVEHDWNPQKDIQAMDR-----AHRIGQKKVVNV 1790 Query: 168 YYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 Y LI + T++E +L R K + ++N Sbjct: 1791 YRLITRGTLEEKILNLQRFKIDVASTVVN 1819 >gi|170114883|ref|XP_001888637.1| predicted protein [Laccaria bicolor S238N-H82] gi|164636332|gb|EDR00628.1| predicted protein [Laccaria bicolor S238N-H82] Length = 163 Score = 93.8 bits (232), Expect = 1e-17, Method: Composition-based stats. Identities = 28/143 (19%), Positives = 56/143 (39%), Gaps = 17/143 (11%) Query: 65 KANAAPIIVAYHFNSDLARLQKAFPQGRT-----------LDKDPCTIQEWNEGKIPLLF 113 +A I+ F S L+ + A + T + + + + ++ Sbjct: 12 RARGEKTIIFSSFVSLLSLIGDALAERHTGFTSYTGALSSAQRQMALKRISQDTQCQVIL 71 Query: 114 AHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQ 173 + G GLN+ N ++ WW+ +Q I R + G + V VY ++A+ Sbjct: 72 ISIKAGGTGLNIT-ACNHVIIMDPWWNPYVEEQAISR-----AHRIGQSKDVHVYRILAR 125 Query: 174 NTIDELVLQRLRTKSTIQDLLLN 196 NTI+E +++ K + L+ Sbjct: 126 NTIEERIVEIQNKKRETIEAFLD 148 >gi|327351086|gb|EGE79943.1| DsDNA-dependent ATPase [Ajellomyces dermatitidis ATCC 18188] Length = 1011 Score = 93.8 bits (232), Expect = 1e-17, Method: Composition-based stats. Identities = 27/107 (25%), Positives = 47/107 (43%), Gaps = 9/107 (8%) Query: 96 KDPCTIQEWN---EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIG 152 K + ++N + + G GLNL G + LV F + W+ Q + RI Sbjct: 720 KRQGLVDDFNRSSSSSVFAFLLSAKAGGTGLNL-IGASRLVLFDVDWNPATDMQAMARI- 777 Query: 153 VTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 + G KR +Y L+ + ++E + QR TK + D +++ K Sbjct: 778 ----HRDGQKRHCRIYRLLLKGALEEKIWQRQVTKIGLADSVMDQKK 820 >gi|303316872|ref|XP_003068438.1| SNF2 family N-terminal domain containing protein [Coccidioides posadasii C735 delta SOWgp] gi|240108119|gb|EER26293.1| SNF2 family N-terminal domain containing protein [Coccidioides posadasii C735 delta SOWgp] Length = 1905 Score = 93.8 bits (232), Expect = 1e-17, Method: Composition-based stats. Identities = 39/209 (18%), Positives = 73/209 (34%), Gaps = 30/209 (14%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEV 61 +QY + QR Y + NI + A K L D + ++ Sbjct: 1627 RQYQEVQR--YLANKNSNIRDISHAPKLTALRDL-----LIDCGIGVDPSAEGELNTAAS 1679 Query: 62 IIEKANAAPIIVAYHFNSDLARLQK-------------AFPQGRTLDKDPCTIQEWN-EG 107 + ++ L +Q K + ++N + Sbjct: 1680 YVSP---HRALIFCQMKEMLDIVQNDVLKKLLPSIQYLRLDGSVEATKRQNIVNQFNTDP 1736 Query: 108 KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFV 167 +L + G GLNL G + ++F W+ ++ Q ++R + G K+ V V Sbjct: 1737 SYDVLLLTTSVGGLGLNLT-GADTVIFVEHDWNPQKDIQAMDR-----AHRIGQKKVVNV 1790 Query: 168 YYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 Y LI + T++E +L R K + ++N Sbjct: 1791 YRLITRGTLEEKILNLQRFKIDVASTVVN 1819 >gi|239607133|gb|EEQ84120.1| dsDNA-dependent ATPase [Ajellomyces dermatitidis ER-3] Length = 989 Score = 93.8 bits (232), Expect = 1e-17, Method: Composition-based stats. Identities = 27/107 (25%), Positives = 47/107 (43%), Gaps = 9/107 (8%) Query: 96 KDPCTIQEWN---EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIG 152 K + ++N + + G GLNL G + LV F + W+ Q + RI Sbjct: 699 KRQGLVDDFNRSSSSSVFAFLLSAKAGGTGLNL-IGASRLVLFDVDWNPATDMQAMARI- 756 Query: 153 VTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 + G KR +Y L+ + ++E + QR TK + D +++ K Sbjct: 757 ----HRDGQKRHCRIYRLLLKGALEEKIWQRQVTKIGLADSVMDQKK 799 >gi|261201037|ref|XP_002626919.1| dsDNA-dependent ATPase [Ajellomyces dermatitidis SLH14081] gi|239593991|gb|EEQ76572.1| dsDNA-dependent ATPase [Ajellomyces dermatitidis SLH14081] Length = 999 Score = 93.8 bits (232), Expect = 1e-17, Method: Composition-based stats. Identities = 27/107 (25%), Positives = 47/107 (43%), Gaps = 9/107 (8%) Query: 96 KDPCTIQEWN---EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIG 152 K + ++N + + G GLNL G + LV F + W+ Q + RI Sbjct: 699 KRQGLVDDFNRSSSSSVFAFLLSAKAGGTGLNL-IGASRLVLFDVDWNPATDMQAMARI- 756 Query: 153 VTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 + G KR +Y L+ + ++E + QR TK + D +++ K Sbjct: 757 ----HRDGQKRHCRIYRLLLKGALEEKIWQRQVTKIGLADSVMDQKK 799 >gi|323485276|ref|ZP_08090626.1| SNF2 family Superfamily II DNA/RNA helicase [Clostridium symbiosum WAL-14163] gi|323401454|gb|EGA93802.1| SNF2 family Superfamily II DNA/RNA helicase [Clostridium symbiosum WAL-14163] Length = 451 Score = 93.8 bits (232), Expect = 1e-17, Method: Composition-based stats. Identities = 37/184 (20%), Positives = 74/184 (40%), Gaps = 26/184 (14%) Query: 19 NIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFN 78 + NS +K + QL + H EK++ L ++E +I+ Y+F Sbjct: 284 ELVGDNSLTKMLYARQLCG------------QWHKEKLEGLRDLVESTEDR-LIIFYNFT 330 Query: 79 SDLARLQKAFPQ----GRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVF 134 ++L +QK ++ + +++ + F + G N Q N +++ Sbjct: 331 AELEAMQKKLADLNRPYSVVNGSKKDLTAYDQADDSITFIQYQAGAMGGNYQK-ANKVIY 389 Query: 135 FSLW---WDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQ 191 F+L + +Q +RI + G + F YYL+ + T++E L L+ + Sbjct: 390 FTLPLGKGSCDIWEQSKKRI-----HRIGQAKPCFYYYLLVKGTVEEKNLAALKEGKELT 444 Query: 192 DLLL 195 D L Sbjct: 445 DELF 448 >gi|330922513|ref|XP_003299868.1| hypothetical protein PTT_10956 [Pyrenophora teres f. teres 0-1] gi|311326280|gb|EFQ92036.1| hypothetical protein PTT_10956 [Pyrenophora teres f. teres 0-1] Length = 916 Score = 93.8 bits (232), Expect = 1e-17, Method: Composition-based stats. Identities = 26/143 (18%), Positives = 54/143 (37%), Gaps = 21/143 (14%) Query: 68 AAPIIVAYHFNSDLARL---------QKAFPQGRTLDKDPC-TIQEWNEGKI-----PLL 112 +++ F + L L A G D I +N+ + Sbjct: 684 GHKVLIFSQFTTTLDLLGHYLDLRSWNYARIDGSVAQTDRQEQILAFNKPSTTKEAADIF 743 Query: 113 FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIA 172 + G G+NL + ++ F W+ ++ Q ++R + G R V VY Sbjct: 744 ILSTRAGGQGINL-AAADTVILFDSDWNPQQDLQAMDR-----AHRIGQTRNVIVYRFAT 797 Query: 173 QNTIDELVLQRLRTKSTIQDLLL 195 +NT+++ +L+ K ++ L++ Sbjct: 798 RNTVEQKLLESAEAKRRLEKLVI 820 >gi|154280933|ref|XP_001541279.1| hypothetical protein HCAG_03376 [Ajellomyces capsulatus NAm1] gi|150411458|gb|EDN06846.1| hypothetical protein HCAG_03376 [Ajellomyces capsulatus NAm1] Length = 1552 Score = 93.8 bits (232), Expect = 1e-17, Method: Composition-based stats. Identities = 31/151 (20%), Positives = 59/151 (39%), Gaps = 20/151 (13%) Query: 51 VHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQKAFPQG----RTLDKD------P 98 K+ L+ ++ K + +++ L L + LD Sbjct: 782 TSSGKMMLLDQLLAKLKKDGHRVLIFSQMVRMLDILADYMDVRGYAYQRLDGTIAAGPRR 841 Query: 99 CTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 +I+ +N + + G G+NL + +V F W+ + Q + R Sbjct: 842 LSIEHFNAPESSDFAFLLSTRAGGLGINLMT-ADTVVLFDSDWNPQADLQAMAR-----A 895 Query: 157 RQAGFKRAVFVYYLIAQNTIDELVLQRLRTK 187 + G R V VY L++++T++E VL+R R K Sbjct: 896 HRIGQTRPVSVYRLVSKDTVEEEVLERARNK 926 >gi|226292087|gb|EEH47507.1| conserved hypothetical protein [Paracoccidioides brasiliensis Pb18] Length = 1083 Score = 93.8 bits (232), Expect = 1e-17, Method: Composition-based stats. Identities = 33/168 (19%), Positives = 62/168 (36%), Gaps = 18/168 (10%) Query: 42 YDEEKHWKEVHDEKIKALEVIIEKANAA-PIIVAYHFNSDLARLQKAFP-----QGRTLD 95 DE + + KI+ L I++K + IV F S L +++ R Sbjct: 824 DDEPETPDHLASTKIRHLMKILKKESGDYKFIVFSFFTSMLTKIEPFLKGANIGYARYDG 883 Query: 96 KDPCTIQEW------NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIE 149 ++E K +L + GLNL + +V +W+ +Q I+ Sbjct: 884 AMRNDMRENSLDRLRTSPKTRVLLCSLRAGSLGLNLT-AASRVVILEPFWNPFVEEQAID 942 Query: 150 RIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 R+ + V VY L +NT++E ++ K + + + Sbjct: 943 RV-----HRLNQTIDVKVYKLTIRNTVEERIVDLQEHKRELANATIEG 985 >gi|225559061|gb|EEH07344.1| chromatin remodelling complex ATPase chain ISW1 [Ajellomyces capsulatus G186AR] Length = 1142 Score = 93.8 bits (232), Expect = 1e-17, Method: Composition-based stats. Identities = 44/239 (18%), Positives = 88/239 (36%), Gaps = 46/239 (19%) Query: 1 MKQY---HKFQRELYCDLQGENIEAFNSAS--------KTVKCLQLAN------------ 37 M Y Q + Y + ++I+A N A +QL Sbjct: 438 MNLYVGMSDMQVKWYQKILEKDIDAVNGAQGKRESKTRLLNIVMQLRKCCNHPYLFEGAE 497 Query: 38 -GAVYYDEEKHWKEVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARL---------Q 85 G Y +E + K+ L+ I+++ + +++ + L L Q Sbjct: 498 PGPPYTTDEHLI--DNAGKMVILDKILKRMKNQGSRVLIFSQMSRVLDILEDYCVFREHQ 555 Query: 86 KAFPQGRTLDKDP-CTIQEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLE 142 G T +D I E+N + + + G G+NL +I++ + W+ + Sbjct: 556 YCRIDGSTAHEDRIAAIDEYNRPGSEKFIFLLTTRAGGLGINLT-SADIVILYDSDWNPQ 614 Query: 143 EHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 Q ++R + G + V V+ + +N I+E VL+R K + L++ + + Sbjct: 615 ADLQAMDR-----AHRIGQTKQVVVFRFVTENAIEEKVLERAAQKLRLDQLVIQQGRAQ 668 >gi|95007492|emb|CAJ20716.1| SWI/SNF family transcriptional activator protein, putative [Toxoplasma gondii RH] Length = 1383 Score = 93.8 bits (232), Expect = 1e-17, Method: Composition-based stats. Identities = 35/219 (15%), Positives = 82/219 (37%), Gaps = 31/219 (14%) Query: 2 KQYHKFQRELYCDLQGENIEA-FNSASKTVKCLQLANGAVYYDE---------EKHWKEV 51 + Y + LQG + ++ + N +D +H E Sbjct: 709 QLYKDLLTKNVAALQGAEGAGRTQLLNLAMQLRKACNHPYLFDGYESEHADPFGEHVIE- 767 Query: 52 HDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQ-----KAFPQGRTL-----DKDPC 99 + K++ + ++ + ++ + L+ + F R D+ Sbjct: 768 NAGKLRFCDRLLRRLIQENRRCLIFTQMTKMIDILEDYCRIRLFKYCRIDGNTSGDERDR 827 Query: 100 TIQEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 I+ +N IP+ + G G+NL + ++ + W+ + Q ++R+ Sbjct: 828 QIEAFNAPGSDIPIFLLSTRAGGLGINL-ATADTVILYDSDWNPQVDLQAMDRV-----H 881 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + G K AV VY L+ ++TI++ +++R K + ++ Sbjct: 882 RIGQKSAVNVYRLVHEHTIEQKIIERAMLKLQLDTAIIQ 920 >gi|119496623|ref|XP_001265085.1| TBP associated factor (Mot1), putative [Neosartorya fischeri NRRL 181] gi|119413247|gb|EAW23188.1| TBP associated factor (Mot1), putative [Neosartorya fischeri NRRL 181] Length = 1920 Score = 93.8 bits (232), Expect = 1e-17, Method: Composition-based stats. Identities = 32/161 (19%), Positives = 64/161 (39%), Gaps = 18/161 (11%) Query: 37 NGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDK 96 +GA Y + ++K + I++ ++ + F K Sbjct: 1694 SGASYVSPHRALIF---CQMKEMLDIVQSEVLKKLLPSVQFL--------RLDGSVEATK 1742 Query: 97 DPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTR 155 + +N + +L + G GLNL G + ++F W+ ++ Q ++R Sbjct: 1743 RQDIVNRFNTDPSYDVLLLTTSVGGLGLNLT-GADTVIFVEHDWNPQKDIQAMDR----- 1796 Query: 156 QRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + G K+ V VY LI + T++E +L R K + ++N Sbjct: 1797 AHRIGQKKVVNVYRLITRGTLEEKILNLQRFKIDVASTVVN 1837 >gi|116201585|ref|XP_001226604.1| conserved hypothetical protein [Chaetomium globosum CBS 148.51] gi|88177195|gb|EAQ84663.1| conserved hypothetical protein [Chaetomium globosum CBS 148.51] Length = 1125 Score = 93.8 bits (232), Expect = 1e-17, Method: Composition-based stats. Identities = 41/226 (18%), Positives = 84/226 (37%), Gaps = 43/226 (19%) Query: 6 KFQRELYCDLQGENIEAFNSAS--------KTVKCLQLAN-------------GAVYYDE 44 + Q + Y + ++I+A N A +QL G Y + Sbjct: 423 EMQVKWYQKILEKDIDAVNGAGGKRESKTRLLNIVMQLRKCCNHPYLFEGAEPGPPYTTD 482 Query: 45 EKHWKEVHDEKIKALEVIIEKAN--AAPIIVAYHFNSDLARL---------QKAFPQGRT 93 E + K+ L+ ++++ + +++ + L L + G T Sbjct: 483 EHLV--YNAGKMIVLDKLLKRMQKQGSRVLIFSQMSRLLDILEDYCVFRQYKYCRIDGST 540 Query: 94 LDKDP-CTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 +D I ++N+ + + G G+NL +I+V + W+ + Q ++R Sbjct: 541 AHEDRIAAIDDYNKPDSEKFVFLLTTRAGGLGINLTT-ADIVVLYDSDWNPQADLQAMDR 599 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + G + V VY + N I+E VL+R K + L++ Sbjct: 600 -----AHRIGQTKQVVVYRFVTDNAIEEKVLERAAQKLRLDQLVIQ 640 >gi|255714703|ref|XP_002553633.1| KLTH0E03476p [Lachancea thermotolerans] gi|238935015|emb|CAR23196.1| KLTH0E03476p [Lachancea thermotolerans] Length = 1474 Score = 93.8 bits (232), Expect = 1e-17, Method: Composition-based stats. Identities = 28/166 (16%), Positives = 67/166 (40%), Gaps = 19/166 (11%) Query: 44 EEKHWKEVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQKAF---------PQGR 92 +K + K++ L ++ ++ L L++ G Sbjct: 1193 PDKSLLQYDCGKLQKLATLLRDLKDGGHRALIFTQMTKVLDVLEQFLNYHGYLYMRLDGA 1252 Query: 93 TLDKDPCTI-QEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 T +D + + +N + +I S G G+NL G + ++F+ W+ +Q +R Sbjct: 1253 TKIEDRQILTERFNTDNRITAFILSSRSGGLGINLT-GADTVIFYDSDWNPAMDKQCQDR 1311 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + G R V +Y ++++TI+ +L++ K + ++++ Sbjct: 1312 C-----HRIGQTRDVHIYRFVSEHTIESNILKKANQKRQLDNVVIQ 1352 >gi|45201219|ref|NP_986789.1| AGR123Cp [Ashbya gossypii ATCC 10895] gi|44986073|gb|AAS54613.1| AGR123Cp [Ashbya gossypii ATCC 10895] Length = 1422 Score = 93.8 bits (232), Expect = 1e-17, Method: Composition-based stats. Identities = 26/159 (16%), Positives = 61/159 (38%), Gaps = 20/159 (12%) Query: 52 HDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARL----------QKAFPQGRTLDKDPC 99 K+ L+ ++ + + +++ L L + + Sbjct: 673 SSGKMVLLDKLLTRLKKDGHRVLIFSQMVRMLDILGDYLSIKGINFQRLDGTVPSSQRRI 732 Query: 100 TIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 +I +N + + G G+NL + ++ F W+ + Q + R Sbjct: 733 SIDHFNAPDSNDFVFLLSTRAGGLGINLMT-ADTVIIFDSDWNPQADLQAMAR-----AH 786 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + G K V VY ++++T++E VL+R R K ++ +++ Sbjct: 787 RIGQKNHVMVYRFVSKDTVEEEVLERARKKMILEYAIIS 825 >gi|225559675|gb|EEH07957.1| chromodomain helicase hrp3 [Ajellomyces capsulatus G186AR] Length = 1552 Score = 93.8 bits (232), Expect = 1e-17, Method: Composition-based stats. Identities = 31/151 (20%), Positives = 59/151 (39%), Gaps = 20/151 (13%) Query: 51 VHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQKAFPQG----RTLDKD------P 98 K+ L+ ++ K + +++ L L + LD Sbjct: 782 TSSGKMMLLDQLLAKLKKDGHRVLIFSQMVRMLDILADYMDVRGYAYQRLDGTIAAGPRR 841 Query: 99 CTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 +I+ +N + + G G+NL + +V F W+ + Q + R Sbjct: 842 LSIEHFNAPESSDFAFLLSTRAGGLGINLMT-ADTVVLFDSDWNPQADLQAMAR-----A 895 Query: 157 RQAGFKRAVFVYYLIAQNTIDELVLQRLRTK 187 + G R V VY L++++T++E VL+R R K Sbjct: 896 HRIGQTRPVSVYRLVSKDTVEEEVLERARNK 926 >gi|45187775|ref|NP_983998.1| ADL098Cp [Ashbya gossypii ATCC 10895] gi|44982536|gb|AAS51822.1| ADL098Cp [Ashbya gossypii ATCC 10895] Length = 804 Score = 93.8 bits (232), Expect = 1e-17, Method: Composition-based stats. Identities = 30/167 (17%), Positives = 64/167 (38%), Gaps = 20/167 (11%) Query: 52 HDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQK----------AFPQGRTLDKDPC 99 K++ L+ ++ + A +++ F S L ++ + Sbjct: 559 TSGKLQILQQLLPRLLAAKHKVLIFSQFVSMLDLIEDWCELNNYSACRIDGSMDNETRRE 618 Query: 100 TIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 I ++E P L + G G+NL + ++ F W+ + Q ++R Sbjct: 619 QINSFSEKGSPHSLFLLSTRAGGLGINLT-AADSVILFDNDWNPQVDLQAMDR-----SH 672 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIH 204 + G + V VY L T++ ++L R K ++ L++ K T+ Sbjct: 673 RIGQQHPVIVYRLYCDKTVESVILARATNKRKLEQLVIQMGKFSTLK 719 >gi|159125579|gb|EDP50696.1| chromatin remodeling complex subunit (Chd3), putative [Aspergillus fumigatus A1163] Length = 1509 Score = 93.5 bits (231), Expect = 1e-17, Method: Composition-based stats. Identities = 29/164 (17%), Positives = 64/164 (39%), Gaps = 20/164 (12%) Query: 52 HDEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQKAFPQGRTLDKD----------PC 99 K+K LE+++ K +++ F +L ++ L + Sbjct: 987 ASGKLKLLEIMLPKLKQRGHRVLIFSQFLDNLDIVEDFLDGLGLLHRRLDGRMTSLEKQK 1046 Query: 100 TIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 I E+N P S G G+NL + ++ ++ + Q + R Sbjct: 1047 RIDEYNADNSPYFAFLLSTRSGGVGINL-ATADTVIIMDPDFNPHQDMQALSR-----AH 1100 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 + G K V V+ L+ + +++E ++Q + K + +L++ + E Sbjct: 1101 RIGQKNKVLVFQLMTRGSVEEKIMQIGKKKMVLDHVLIDRMVAE 1144 >gi|70993280|ref|XP_751487.1| chromatin remodeling complex subunit (Chd3) [Aspergillus fumigatus Af293] gi|66849121|gb|EAL89449.1| chromatin remodeling complex subunit (Chd3), putative [Aspergillus fumigatus Af293] Length = 1509 Score = 93.5 bits (231), Expect = 1e-17, Method: Composition-based stats. Identities = 29/164 (17%), Positives = 64/164 (39%), Gaps = 20/164 (12%) Query: 52 HDEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQKAFPQGRTLDKD----------PC 99 K+K LE+++ K +++ F +L ++ L + Sbjct: 987 ASGKLKLLEIMLPKLKQRGHRVLIFSQFLDNLDIVEDFLDGLGLLHRRLDGRMTSLEKQK 1046 Query: 100 TIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 I E+N P S G G+NL + ++ ++ + Q + R Sbjct: 1047 RIDEYNADNSPYFAFLLSTRSGGVGINL-ATADTVIIMDPDFNPHQDMQALSR-----AH 1100 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 + G K V V+ L+ + +++E ++Q + K + +L++ + E Sbjct: 1101 RIGQKNKVLVFQLMTRGSVEEKIMQIGKKKMVLDHVLIDRMVAE 1144 >gi|183234185|ref|XP_650328.2| DNA repair protein [Entamoeba histolytica HM-1:IMSS] gi|169801218|gb|EAL44942.2| DNA repair protein, putative [Entamoeba histolytica HM-1:IMSS] Length = 764 Score = 93.5 bits (231), Expect = 1e-17, Method: Composition-based stats. Identities = 47/236 (19%), Positives = 91/236 (38%), Gaps = 50/236 (21%) Query: 1 MKQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAV----YYDEEKHWKEVHDEK- 55 +K Y +E L+ + ++ ++ +L N Y EEK +DEK Sbjct: 449 IKLYKIMLKE----LEKKKLDQCSALKYIQLFTKLCNHPSLISKYLTEEKISLNENDEKC 504 Query: 56 -----------------IKALEVIIEKANAAPIIVA-YHFNSDLARL----------QKA 87 I+ ++ I+ K+ ++V+ Y DL + +K Sbjct: 505 IKGISLNEESSNKFNITIQFIKEILIKSKEKVVLVSNYTKTLDLFEIYFKQEEEYKQKKI 564 Query: 88 FPQGRTLDKDPC-----TIQEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWD 140 F R K +++ N+ +L + G GLNL G + L+ F W+ Sbjct: 565 FNYLRLDGKTSQKQRDIIVEKINDKSSNYNILLLSSKAGGVGLNL-IGCSRLILFDPDWN 623 Query: 141 LEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + +Q + RI + G ++ +Y ++ TI+E + QR K+ I + ++ Sbjct: 624 PAKDKQAMARIW-----RDGQQKKAMIYRMLCTGTIEEKIYQRQLQKNQISESIIE 674 >gi|17539642|ref|NP_502082.1| Phasmid Socket Absent family member (psa-4) [Caenorhabditis elegans] gi|10312098|gb|AAG16655.1|AF230280_1 SWI2/SNF2-like protein [Caenorhabditis elegans] gi|3875463|emb|CAA92768.1| C. elegans protein F01G4.1, confirmed by transcript evidence [Caenorhabditis elegans] gi|3879468|emb|CAA92978.1| C. elegans protein F01G4.1, confirmed by transcript evidence [Caenorhabditis elegans] Length = 1474 Score = 93.5 bits (231), Expect = 1e-17, Method: Composition-based stats. Identities = 36/159 (22%), Positives = 63/159 (39%), Gaps = 20/159 (12%) Query: 55 KIKALEVIIEK--ANAAPIIVAYHFNSD---------LARLQKAFPQGRTL-DKDPCTIQ 102 K++ L+ I+ K A I++ + S R G T D+ + Sbjct: 851 KLELLDRILPKLKATGHRILMFFQMTSMMNIFEDFLNFRRYTYLRLDGSTKPDERGDLLT 910 Query: 103 EWNEGKIPLLF--AHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 ++N L + G GLNLQ + ++ F W+ + Q R + G Sbjct: 911 QFNAPNSDLFLFMLSTRAGGLGLNLQT-ADTVIIFDSDWNPHQDMQA-----QDRAHRIG 964 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 K+ V V LI N+++E +L R K + + ++ A K Sbjct: 965 QKKEVRVLRLITANSVEEKILAAARYKLNVDEKVIQAGK 1003 >gi|325096446|gb|EGC49756.1| RING-13 protein [Ajellomyces capsulatus H88] Length = 1188 Score = 93.5 bits (231), Expect = 1e-17, Method: Composition-based stats. Identities = 36/220 (16%), Positives = 77/220 (35%), Gaps = 39/220 (17%) Query: 5 HKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVI-- 62 +R+ L+ A ++ +K L +W V KI+ I Sbjct: 971 KAVERKSLPQLKKNA--ARSAEAKREYMRYLT---------DNW--VTSAKIEKTMEILR 1017 Query: 63 -----IEKANAAPI--IVAYHFNSDLARLQKAFPQ-----------GRTLDKDPCTIQEW 104 I + + P IV F S L LQ + + ++ ++ Sbjct: 1018 DIQSRIPEGDDKPEKTIVFSQFTSLLDLLQVPIEREGWGYCRYDGSMQPSHRNEAVLRFS 1077 Query: 105 NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA 164 + ++ + GLNL + ++ +W+ +Q I+R + G R Sbjct: 1078 DSQNHTIMLISLKAGNSGLNL-VAASQVIILDPFWNPYLEEQAIDR-----AHRIGQMRP 1131 Query: 165 VFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIH 204 V V+ ++ T+++ +L+ K + + L+ ++I Sbjct: 1132 VMVHRILVHKTVEDRILELQDRKRALIEGALDETASKSIG 1171 >gi|317025573|ref|XP_001389339.2| ISWI chromatin-remodeling complex ATPase ISW2 [Aspergillus niger CBS 513.88] Length = 1121 Score = 93.5 bits (231), Expect = 1e-17, Method: Composition-based stats. Identities = 42/231 (18%), Positives = 88/231 (38%), Gaps = 43/231 (18%) Query: 6 KFQRELYCDLQGENIEAFNSAS--------KTVKCLQLAN-------------GAVYYDE 44 + Q + Y + ++I+A N A+ +QL G Y + Sbjct: 434 EMQVKWYQKILEKDIDAVNGAAGKRESKTRLLNIVMQLRKCCNHPYLFEGAEPGPPYTTD 493 Query: 45 EKHWKEVHDEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQ---------KAFPQGRT 93 E + K+ L+ ++ + + +++ + L L+ G T Sbjct: 494 EHLV--YNAGKMTILDKLLARMQKQGSRVLIFSQMSRVLDILEDYCVFREYNYCRIDGTT 551 Query: 94 LDKDP-CTIQEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 +D I E+N+ + + + G G+NL +I+V F W+ + Q ++R Sbjct: 552 AHEDRIAAIDEYNKPGSEKFIFLLTTRAGGLGINLTT-ADIVVLFDSDWNPQADLQAMDR 610 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 + G + V V+ + +N I+E VL+R K + L++ + + Sbjct: 611 -----AHRIGQTKQVVVFRFVTENAIEEKVLERAAQKLRLDQLVIQQGRAQ 656 >gi|307183105|gb|EFN70022.1| TATA-binding protein-associated factor 172 [Camponotus floridanus] Length = 1883 Score = 93.5 bits (231), Expect = 1e-17, Method: Composition-based stats. Identities = 25/142 (17%), Positives = 55/142 (38%), Gaps = 20/142 (14%) Query: 69 APIIVAYHFNSDLARLQK-------------AFPQGRTLDKDPCTIQEWN-EGKIPLLFA 114 ++ + L ++K + + +N + I +L Sbjct: 1668 HRALIFCQLKAMLDIVEKDLLRTHLPTVTYLRLDGSVPAAQRHSVVARFNADPSIDVLLL 1727 Query: 115 HPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQN 174 G GLNL G + ++F W+ + Q ++R + G K+ V VY LI ++ Sbjct: 1728 TTQVGGLGLNLT-GADTVIFVEHDWNPMKDLQAMDR-----AHRIGQKKVVNVYRLITRS 1781 Query: 175 TIDELVLQRLRTKSTIQDLLLN 196 T++E ++ + K + +++ Sbjct: 1782 TVEEKIMGLQKFKLLTANTIIS 1803 >gi|302912567|ref|XP_003050729.1| SWI/SNF family of DNA-dependent ATPase [Nectria haematococca mpVI 77-13-4] gi|256731667|gb|EEU45016.1| SWI/SNF family of DNA-dependent ATPase [Nectria haematococca mpVI 77-13-4] Length = 1117 Score = 93.5 bits (231), Expect = 1e-17, Method: Composition-based stats. Identities = 41/225 (18%), Positives = 80/225 (35%), Gaps = 41/225 (18%) Query: 6 KFQRELYCDLQGENIEAFNSAS--------KTVKCLQLAN-------------GAVYY-D 43 + Q + Y + ++I+A N A +QL G Y D Sbjct: 418 EMQVKWYQKILEKDIDAVNGAGGKRESKTRLLNIVMQLRKCCNHPYLFEGAEPGPPYTTD 477 Query: 44 EEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQK----------AFPQGRT 93 E + + L +EK + +++ + L L+ G Sbjct: 478 EHLVYNAGKMAVLDKLLNRLEK-QGSRVLIFSQMSRLLDILEDYCVFREYKYCRIDGGTA 536 Query: 94 LDKDPCTIQEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERI 151 + I E+N+ + + + G G+NL +I++ + W+ + Q ++R Sbjct: 537 HEDRIAAIDEYNKPGSEKFIFLLTTRAGGLGINLTT-ADIVILYDSDWNPQADLQAMDR- 594 Query: 152 GVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + G + V VY + N I+E VL+R K + L++ Sbjct: 595 ----AHRIGQTKQVVVYRFVTDNAIEEKVLERAAQKLRLDQLVIQ 635 >gi|240280484|gb|EER43988.1| RING-13 protein [Ajellomyces capsulatus H143] Length = 1188 Score = 93.5 bits (231), Expect = 1e-17, Method: Composition-based stats. Identities = 36/220 (16%), Positives = 77/220 (35%), Gaps = 39/220 (17%) Query: 5 HKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVI-- 62 +R+ L+ A ++ +K L +W V KI+ I Sbjct: 971 KAVERKSLPQLKKNA--ARSAEAKREYMRYLT---------DNW--VTSAKIEKTMEILR 1017 Query: 63 -----IEKANAAPI--IVAYHFNSDLARLQKAFPQ-----------GRTLDKDPCTIQEW 104 I + + P IV F S L LQ + + ++ ++ Sbjct: 1018 DIQSRIPEGDDKPEKTIVFSQFTSLLDLLQVPIEREGWGYCRYDGSMQPSHRNEAVLRFS 1077 Query: 105 NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA 164 + ++ + GLNL + ++ +W+ +Q I+R + G R Sbjct: 1078 DSQNHTIMLISLKAGNSGLNL-VAASQVIILDPFWNPYLEEQAIDR-----AHRIGQMRP 1131 Query: 165 VFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIH 204 V V+ ++ T+++ +L+ K + + L+ ++I Sbjct: 1132 VMVHRILVHKTVEDRILELQDRKRALIEGALDETASKSIG 1171 >gi|126313652|ref|XP_001368284.1| PREDICTED: hypothetical protein [Monodelphis domestica] Length = 982 Score = 93.5 bits (231), Expect = 1e-17, Method: Composition-based stats. Identities = 35/218 (16%), Positives = 73/218 (33%), Gaps = 31/218 (14%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQL--ANGAVYYDEEKHWKEV-------- 51 K Y L DL E QL G Y + + Sbjct: 373 KYYKAL---LMKDLDAFENETAKKVKLQNILSQLRKCVGHPYLFDGVEPEPFEIGDHLIE 429 Query: 52 HDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAFP---------QGRTLDKDPC- 99 K+ L+ ++ +++ L LQ G ++ Sbjct: 430 ASGKLHLLDKLLSFLYTRHHRVLLFSQMTHMLDILQDYMDYRGYSYERLDGSVRGEERHL 489 Query: 100 TIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQA 159 I+ + + I + + G G+NL + ++F ++ + Q I R + Sbjct: 490 AIKNFGQQPIFVFLLSTKAGGVGMNLT-AADTVIFVDSDFNPQNDLQAIAR-----AHRI 543 Query: 160 GFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 G K++V + LI ++T++E++ +R +K + ++ Sbjct: 544 GQKKSVKIIRLIGRDTVEEVIYRRAASKLRLTSAIIEG 581 >gi|119499894|ref|XP_001266704.1| chromatin remodeling complex subunit (Chd3), putative [Neosartorya fischeri NRRL 181] gi|119414869|gb|EAW24807.1| chromatin remodeling complex subunit (Chd3), putative [Neosartorya fischeri NRRL 181] Length = 1509 Score = 93.5 bits (231), Expect = 1e-17, Method: Composition-based stats. Identities = 29/164 (17%), Positives = 64/164 (39%), Gaps = 20/164 (12%) Query: 52 HDEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQKAFPQGRTLDKD----------PC 99 K+K LE+++ K +++ F +L ++ L + Sbjct: 986 ASGKLKLLEIMLPKLKQRGHRVLIFSQFLDNLDIVEDFLDGLGLLHRRLDGRMTSLEKQK 1045 Query: 100 TIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 I E+N P S G G+NL + ++ ++ + Q + R Sbjct: 1046 RIDEYNADNSPYFAFLLSTRSGGVGINL-ATADTVIIMDPDFNPHQDMQALSR-----AH 1099 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 + G K V V+ L+ + +++E ++Q + K + +L++ + E Sbjct: 1100 RIGQKNKVLVFQLMTRGSVEEKIMQIGKKKMVLDHVLIDRMVAE 1143 >gi|226289865|gb|EEH45349.1| ISWI chromatin-remodeling complex ATPase ISW1 [Paracoccidioides brasiliensis Pb18] Length = 1146 Score = 93.5 bits (231), Expect = 1e-17, Method: Composition-based stats. Identities = 44/239 (18%), Positives = 88/239 (36%), Gaps = 46/239 (19%) Query: 1 MKQY---HKFQRELYCDLQGENIEAFNSAS--------KTVKCLQLAN------------ 37 M Y Q + Y + ++I+A N A +QL Sbjct: 435 MNLYVGMSDMQVKWYQKILEKDIDAVNGAQGKRESKTRLLNIVMQLRKCCNHPYLFEGAE 494 Query: 38 -GAVYYDEEKHWKEVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARL---------Q 85 G Y +E + K+ L+ I+++ + +++ + L L Q Sbjct: 495 PGPPYTTDEHLI--DNAGKMVILDKILKRMKNQGSRVLIFSQMSRVLDILEDYCVFREHQ 552 Query: 86 KAFPQGRTLDKDP-CTIQEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLE 142 G T +D I E+N + + + G G+NL +I++ + W+ + Sbjct: 553 YCRIDGSTAHEDRIAAIDEYNRPGSEKFIFLLTTRAGGLGINLT-SADIVILYDSDWNPQ 611 Query: 143 EHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 Q ++R + G + V V+ + +N I+E VL+R K + L++ + + Sbjct: 612 ADLQAMDR-----AHRIGQTKQVVVFRFVTENAIEEKVLKRAAQKLRLDQLVIQQGRAQ 665 >gi|150864381|ref|XP_001383167.2| chromatin remodeling complex Adenosinetriphosphatase [Scheffersomyces stipitis CBS 6054] gi|149385637|gb|ABN65138.2| chromatin remodeling complex Adenosinetriphosphatase [Scheffersomyces stipitis CBS 6054] Length = 1222 Score = 93.5 bits (231), Expect = 1e-17, Method: Composition-based stats. Identities = 42/226 (18%), Positives = 87/226 (38%), Gaps = 43/226 (19%) Query: 6 KFQRELYCDLQGENIEAFNSAS--------KTVKCLQLAN-------------GAVYYDE 44 + Q + Y L ++I+A N +QL G Y ++ Sbjct: 541 EMQIQWYKKLLEKDIDAVNGVVGKREGKTRLLNIVMQLRKCCNHPYLFDGAEPGPPYTND 600 Query: 45 EKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQ---------KAFPQGRT 93 E + K+ L+ +++K + + +++ + L L+ G T Sbjct: 601 EHLV--FNSGKMVILDKMLQKFKSEGSRVLIFSQMSRLLDILEDYCYLRDYSYCRIDGST 658 Query: 94 LDKDP-CTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 +D I ++N+ + + + G G+NL +I++ + W+ + Q ++R Sbjct: 659 SHEDRIEAIDQYNDPESDKFIFLLTTRAGGLGINLT-SADIVILYDSDWNPQADLQAMDR 717 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + G K+ V VY + +N I+E VL R K + L++ Sbjct: 718 -----AHRIGQKKQVKVYRFVTENAIEEKVLDRAAQKLRLDQLVIQ 758 >gi|145475913|ref|XP_001423979.1| hypothetical protein [Paramecium tetraurelia strain d4-2] gi|124391041|emb|CAK56581.1| unnamed protein product [Paramecium tetraurelia] Length = 1079 Score = 93.5 bits (231), Expect = 1e-17, Method: Composition-based stats. Identities = 33/155 (21%), Positives = 63/155 (40%), Gaps = 18/155 (11%) Query: 55 KIKALEVIIEK--ANAAPIIVAYHFNSDLA---------RLQKAFPQGRT-LDKDPCTIQ 102 K+ L +I K + II+ L ++ G T ++ ++ Sbjct: 770 KMNTLVSLIYKLKSQNHKIIIFTQMTKMLDIFEAVLSLSKISYLRLDGSTPVEMRQKIVE 829 Query: 103 EWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFK 162 +N+ I + S G GLNL G + ++F+ W+ +Q +R + G Sbjct: 830 SFNQLNITCFISSTRSGGIGLNLT-GADTVIFYDTDWNPAMDKQAQDRC-----HRIGQV 883 Query: 163 RAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 R V +Y LI +TI+E + + K + D ++ + Sbjct: 884 RPVTIYRLITNSTIEENIFLKSLQKRQLDDFVMQS 918 >gi|85109522|ref|XP_962958.1| hypothetical protein NCU07837 [Neurospora crassa OR74A] gi|28924603|gb|EAA33722.1| hypothetical protein NCU07837 [Neurospora crassa OR74A] Length = 1150 Score = 93.5 bits (231), Expect = 1e-17, Method: Composition-based stats. Identities = 36/144 (25%), Positives = 55/144 (38%), Gaps = 19/144 (13%) Query: 61 VIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTI--QEWNEGKIPLLFAHPAS 118 IIE F + G+T KD T+ Q N+ + L Sbjct: 738 DIIEA-----------FVRRQDGINYLRMDGKTPVKDRQTLVDQFNNDPDLHLFLLTTKV 786 Query: 119 CGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDE 178 G G NL G N ++ F W+ Q ER + G K+ V +Y L+ TI+E Sbjct: 787 GGLGTNLT-GANRVIIFDPDWNPSTDVQARERAW-----RLGQKKEVTIYRLMTAGTIEE 840 Query: 179 LVLQRLRTKSTIQDLLLNALKKET 202 + R K + + +L K++T Sbjct: 841 KIYHRQIFKQFLSNKVLKDPKQQT 864 >gi|302894367|ref|XP_003046064.1| hypothetical protein NECHADRAFT_91099 [Nectria haematococca mpVI 77-13-4] gi|256726991|gb|EEU40351.1| hypothetical protein NECHADRAFT_91099 [Nectria haematococca mpVI 77-13-4] Length = 884 Score = 93.5 bits (231), Expect = 2e-17, Method: Composition-based stats. Identities = 34/173 (19%), Positives = 63/173 (36%), Gaps = 20/173 (11%) Query: 32 CLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAP---IIVAYHFNSDLARLQKAF 88 L+ A D E K +A+ I++ P ++V + S L ++ Sbjct: 690 LLEPAPEDAGDDASSFDAETQSSKTEAMLQILKATVRKPGSKVVVFSQWTSFLNIIEVQL 749 Query: 89 P-----------QGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSL 137 +T +D N+ ++ A A C GLNL + ++ Sbjct: 750 KAEGIGFTRIDGSMKTDKRDSAIEALDNDPDTRVMLASLAVCSVGLNL-VAADTVILSDS 808 Query: 138 WWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 WW Q I+R+ + G R V+ L+ + +++E VL + K + Sbjct: 809 WWAPAIEDQAIDRV-----HRLGQTRETTVFRLVMEGSVEERVLNIQKEKREL 856 >gi|240279419|gb|EER42924.1| chromodomain helicase hrp3 [Ajellomyces capsulatus H143] Length = 1540 Score = 93.5 bits (231), Expect = 2e-17, Method: Composition-based stats. Identities = 31/151 (20%), Positives = 59/151 (39%), Gaps = 20/151 (13%) Query: 51 VHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQKAFPQG----RTLDKD------P 98 K+ L+ ++ K + +++ L L + LD Sbjct: 770 TSSGKMMLLDQLLAKLKKDGHRVLIFSQMVRMLDILADYMDVRGYAYQRLDGTIAAGPRR 829 Query: 99 CTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 +I+ +N + + G G+NL + +V F W+ + Q + R Sbjct: 830 LSIEHFNAPESSDFAFLLSTRAGGLGINLMT-ADTVVLFDSDWNPQADLQAMAR-----A 883 Query: 157 RQAGFKRAVFVYYLIAQNTIDELVLQRLRTK 187 + G R V VY L++++T++E VL+R R K Sbjct: 884 HRIGQTRPVSVYRLVSKDTVEEEVLERARNK 914 >gi|227543556|ref|ZP_03973605.1| conserved hypothetical protein [Lactobacillus reuteri CF48-3A] gi|227186396|gb|EEI66467.1| conserved hypothetical protein [Lactobacillus reuteri CF48-3A] Length = 73 Score = 93.5 bits (231), Expect = 2e-17, Method: Composition-based stats. Identities = 23/70 (32%), Positives = 40/70 (57%), Gaps = 5/70 (7%) Query: 131 ILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 L+++ L W LE +QQ R+ + G ++ V ++++I + TIDE +L L+ K Sbjct: 1 TLIWYGLTWSLELYQQTNARLW-----RQGQRQPVVIHHIITEGTIDENILAALKRKDKT 55 Query: 191 QDLLLNALKK 200 Q L+NA+K Sbjct: 56 QLALINAVKA 65 >gi|295660997|ref|XP_002791054.1| ISWI chromatin-remodeling complex ATPase ISW1 [Paracoccidioides brasiliensis Pb01] gi|226280981|gb|EEH36547.1| ISWI chromatin-remodeling complex ATPase ISW1 [Paracoccidioides brasiliensis Pb01] Length = 1154 Score = 93.5 bits (231), Expect = 2e-17, Method: Composition-based stats. Identities = 44/239 (18%), Positives = 88/239 (36%), Gaps = 46/239 (19%) Query: 1 MKQY---HKFQRELYCDLQGENIEAFNSAS--------KTVKCLQLAN------------ 37 M Y Q + Y + ++I+A N A +QL Sbjct: 452 MNLYVGMSDMQVKWYQKILEKDIDAVNGAQGKRESKTRLLNIVMQLRKCCNHPYLFEGAE 511 Query: 38 -GAVYYDEEKHWKEVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARL---------Q 85 G Y +E + K+ L+ I+++ + +++ + L L Q Sbjct: 512 PGPPYTTDEHLI--DNAGKMVILDKILKRMKNQGSRVLIFSQMSRVLDILEDYCVFREHQ 569 Query: 86 KAFPQGRTLDKDP-CTIQEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLE 142 G T +D I E+N + + + G G+NL +I++ + W+ + Sbjct: 570 YCRIDGSTAHEDRIAAIDEYNRPGSEKFIFLLTTRAGGLGINLT-SADIVILYDSDWNPQ 628 Query: 143 EHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 Q ++R + G + V V+ + +N I+E VL+R K + L++ + + Sbjct: 629 ADLQAMDR-----AHRIGQTKQVVVFRFVTENAIEEKVLKRAAQKLRLDQLVIQQGRAQ 682 >gi|261197291|ref|XP_002625048.1| chromatin remodelling complex ATPase chain ISW1 [Ajellomyces dermatitidis SLH14081] gi|239595678|gb|EEQ78259.1| chromatin remodelling complex ATPase chain ISW1 [Ajellomyces dermatitidis SLH14081] Length = 1129 Score = 93.5 bits (231), Expect = 2e-17, Method: Composition-based stats. Identities = 44/239 (18%), Positives = 88/239 (36%), Gaps = 46/239 (19%) Query: 1 MKQY---HKFQRELYCDLQGENIEAFNSAS--------KTVKCLQLAN------------ 37 M Y Q + Y + ++I+A N A +QL Sbjct: 425 MNLYVGMSDMQVKWYQKILEKDIDAVNGAQGKRESKTRLLNIVMQLRKCCNHPYLFEGAE 484 Query: 38 -GAVYYDEEKHWKEVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARL---------Q 85 G Y +E + K+ L+ I+++ + +++ + L L Q Sbjct: 485 PGPPYTTDEHLI--DNAGKMVILDKILKRMKNQGSRVLIFSQMSRVLDILEDYCVFREHQ 542 Query: 86 KAFPQGRTLDKDP-CTIQEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLE 142 G T +D I E+N + + + G G+NL +I++ + W+ + Sbjct: 543 YCRIDGSTAHEDRIAAIDEYNRPGSEKFIFLLTTRAGGLGINLT-SADIVILYDSDWNPQ 601 Query: 143 EHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 Q ++R + G + V V+ + +N I+E VL+R K + L++ + + Sbjct: 602 ADLQAMDR-----AHRIGQTKQVIVFRFVTENAIEEKVLERAAQKLRLDQLVIQQGRAQ 655 >gi|159124373|gb|EDP49491.1| SNF2 family helicase/ATPase, putative [Aspergillus fumigatus A1163] Length = 1141 Score = 93.5 bits (231), Expect = 2e-17, Method: Composition-based stats. Identities = 31/172 (18%), Positives = 64/172 (37%), Gaps = 21/172 (12%) Query: 40 VYYDEEKH-WKEVHDEKIKALEVIIE-KANAAPIIVAYHFNSDLARLQKAFPQGRT---- 93 +Y + + + + KI+ L I+ +A IV F S L +++ + Sbjct: 889 IYLNPGDNETQVLPSTKIRHLMKILRREAADYKFIVFSVFTSMLDKIEPFLKRAGIGFAR 948 Query: 94 --------LDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQ 145 L + N +L + GLNL + +V +W+ + Sbjct: 949 YDGSMRNDLREASLDKLRHNSA-TRVLLCSLRAGALGLNLT-AASRVVILEPFWNPFVEE 1006 Query: 146 QMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 Q I+R+ + V +Y +I + T++E +L+ K + +L + Sbjct: 1007 QAIDRV-----HRLNQTVDVKIYKMIIKETVEERILELQDRKRELANLTIEG 1053 >gi|391640|dbj|BAA03262.1| ORF2 [Gallus gallus] Length = 560 Score = 93.5 bits (231), Expect = 2e-17, Method: Composition-based stats. Identities = 27/153 (17%), Positives = 56/153 (36%), Gaps = 21/153 (13%) Query: 68 AAPIIVAYHFNSDLARLQKAFP---------QGRTLDK-DPCTIQEWN-EGKIPL-LFAH 115 +++ L L + G + + +N EG Sbjct: 52 GNRVLIFSQMVRMLDILAEYLKYRQFPFQRLDGSIKGELRKQALDHFNAEGSEDFCFLLS 111 Query: 116 PASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNT 175 + G G+NL + +V F W+ + Q R + G K+ V +Y L+ + + Sbjct: 112 TRAGGLGINL-ASADTVVIFDSDWNPQNDLQAQAR-----AHRIGQKKQVNIYRLVTKGS 165 Query: 176 IDELVLQRLRTKSTIQDLL---LNALKKETIHV 205 ++E +L+R + K + L+ ++ K +H Sbjct: 166 VEEDILERAKKKMVLDHLVIQRMDTTGKTVLHT 198 >gi|70991923|ref|XP_750810.1| SNF2 family helicase/ATPase [Aspergillus fumigatus Af293] gi|66848443|gb|EAL88772.1| SNF2 family helicase/ATPase, putative [Aspergillus fumigatus Af293] Length = 1141 Score = 93.5 bits (231), Expect = 2e-17, Method: Composition-based stats. Identities = 31/172 (18%), Positives = 64/172 (37%), Gaps = 21/172 (12%) Query: 40 VYYDEEKH-WKEVHDEKIKALEVIIE-KANAAPIIVAYHFNSDLARLQKAFPQGRT---- 93 +Y + + + + KI+ L I+ +A IV F S L +++ + Sbjct: 889 IYLNPGDNETQVLPSTKIRHLMKILRREAADYKFIVFSVFTSMLDKIEPFLKRAGIGFAR 948 Query: 94 --------LDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQ 145 L + N +L + GLNL + +V +W+ + Sbjct: 949 YDGSMRNDLREASLDKLRHNSA-TRVLLCSLRAGALGLNLT-AASRVVILEPFWNPFVEE 1006 Query: 146 QMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 Q I+R+ + V +Y +I + T++E +L+ K + +L + Sbjct: 1007 QAIDRV-----HRLNQTVDVKIYKMIIKETVEERILELQDRKRELANLTIEG 1053 >gi|67609493|ref|XP_667013.1| hypothetical protein [Cryptosporidium hominis TU502] gi|54658094|gb|EAL36778.1| hypothetical protein Chro.60441 [Cryptosporidium hominis] Length = 1102 Score = 93.5 bits (231), Expect = 2e-17, Method: Composition-based stats. Identities = 45/221 (20%), Positives = 86/221 (38%), Gaps = 37/221 (16%) Query: 7 FQRELYCDLQGENIEAFNSASKTVKC------LQL--ANGAVY---------YDEEKHWK 49 QR LY DL +N++A K +QL A Y D Sbjct: 432 MQRRLYKDLLSKNVDALQEKEGGGKLRLINLAMQLRKACNHPYLFDGYEDKSVDPFGEHV 491 Query: 50 EVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQ-----KAFPQGRTLDKDPCT-- 100 + K+ ++ +I+K + + I++ L L+ + FP R Sbjct: 492 VENSGKMVLMDRLIKKLVSGGSRILIFSQMARVLDILEDYCHMRGFPYCRIDGNTSGDDR 551 Query: 101 ---IQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTR 155 I E+N+ + + G G+NL +I++ + W+ + Q ++R Sbjct: 552 DRQISEFNKPNSEKLVFLLSTRAGGLGINL-ATADIVILYDSDWNPQADLQAMDR----- 605 Query: 156 QRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + G K+ VFV+ L ++TI+E +++R K + ++ Sbjct: 606 AHRIGQKKPVFVFRLCHEHTIEEKIIERANLKLQLDFAIIQ 646 >gi|322711493|gb|EFZ03066.1| SNF2 family helicase/ATPase, putative [Metarhizium anisopliae ARSEF 23] Length = 1025 Score = 93.5 bits (231), Expect = 2e-17, Method: Composition-based stats. Identities = 40/163 (24%), Positives = 67/163 (41%), Gaps = 19/163 (11%) Query: 50 EVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQK---------AFPQGRTLDKDP 98 E+ K+ L +I + N ++V F+ + LQ+ G T + Sbjct: 844 ELDSGKVTKLLELIRQYQENGDRVLVFSKFSRLIDLLQEVLALQGIDHRVLMGSTDVSER 903 Query: 99 CT-IQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 I E+N IP+ + G G+NL N ++ F + ++ Q R Sbjct: 904 QVLIDEFNGNANIPVFLLTTGAGGTGINLT-AANKVIIFDQSDNPQDDIQA-----ENRA 957 Query: 157 RQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 + G KR V V LIA TI+ELV + + K + + + AL+ Sbjct: 958 HRLGQKRDVEVVRLIASQTIEELVYKACQKKIELANKVTGALE 1000 >gi|296422807|ref|XP_002840950.1| hypothetical protein [Tuber melanosporum Mel28] gi|295637177|emb|CAZ85141.1| unnamed protein product [Tuber melanosporum] Length = 1046 Score = 93.5 bits (231), Expect = 2e-17, Method: Composition-based stats. Identities = 27/142 (19%), Positives = 58/142 (40%), Gaps = 17/142 (11%) Query: 66 ANAAPIIVAYHFNSDLARLQKAF---------PQGRTLDKDPCTI--QEWNEGKIPLLFA 114 A ++ L L++ G T + + + N+ +I + Sbjct: 734 AGGHRALIFTQMTKVLDILEQFLNIHGHRYLRLDGATKVEQRQILTDRFNNDTRILVFIL 793 Query: 115 HPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQN 174 S G G+NL G + ++F+ L W+ +Q +R + G R V +Y +++ Sbjct: 794 STRSGGLGINLT-GADTVIFYDLDWNPAMDKQCQDRC-----HRIGQTRDVHIYRFVSEY 847 Query: 175 TIDELVLQRLRTKSTIQDLLLN 196 TI+ +L++ K + D+++ Sbjct: 848 TIESNILRKSNQKRMLDDVVIQ 869 >gi|227544624|ref|ZP_03974673.1| conserved hypothetical protein [Lactobacillus reuteri CF48-3A] gi|227185390|gb|EEI65461.1| conserved hypothetical protein [Lactobacillus reuteri CF48-3A] Length = 73 Score = 93.5 bits (231), Expect = 2e-17, Method: Composition-based stats. Identities = 23/70 (32%), Positives = 40/70 (57%), Gaps = 5/70 (7%) Query: 131 ILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 L+++ L W LE +QQ R+ + G ++ V ++++I + TIDE +L L+ K Sbjct: 1 TLIWYGLTWSLELYQQTNARLW-----RQGQRQPVVIHHIITEGTIDENILAALKRKDKT 55 Query: 191 QDLLLNALKK 200 Q L+NA+K Sbjct: 56 QLALINAVKA 65 >gi|168019640|ref|XP_001762352.1| chromatin remodeling complex SWI/SNF protein [Physcomitrella patens subsp. patens] gi|162686430|gb|EDQ72819.1| chromatin remodeling complex SWI/SNF protein [Physcomitrella patens subsp. patens] Length = 1289 Score = 93.5 bits (231), Expect = 2e-17, Method: Composition-based stats. Identities = 34/171 (19%), Positives = 70/171 (40%), Gaps = 20/171 (11%) Query: 41 YYDEEKHWKEVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQKAFP--------- 89 Y E + K + L+ ++ K +++ + L+ Sbjct: 844 YEPENRDELIRSSGKFELLDRLLPKLAKTGHRVLLFSQMTRLMDILEDYLEWHGFKFLRL 903 Query: 90 QGRTL-DKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 G T ++ +Q++N P + + G GLNLQ + ++ F W+ + QQ Sbjct: 904 DGTTKTEERGTLLQKFNAPDSPYFMFLLSTRAGGLGLNLQT-ADTVILFDSDWNPQMDQQ 962 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 +R + G K+ V V+ L++ +I+E +L+R ++K I ++ A Sbjct: 963 AEDR-----AHRIGQKKEVRVFVLVSVGSIEEEILERAKSKMGIDAKVIQA 1008 >gi|169767388|ref|XP_001818165.1| DNA-dependent ATPase [Aspergillus oryzae RIB40] gi|83766020|dbj|BAE56163.1| unnamed protein product [Aspergillus oryzae] Length = 957 Score = 93.5 bits (231), Expect = 2e-17, Method: Composition-based stats. Identities = 31/167 (18%), Positives = 65/167 (38%), Gaps = 22/167 (13%) Query: 46 KHWKEVHDEK---IKALEVIIEKANAAPIIVAYHFNSDLARLQK----------AFPQGR 92 +H+ K + L I+ + + +++ ++ S L L Sbjct: 606 RHFSPSSSAKIRVLDQLLHILHTSTSEKVVLVSNYTSTLNLLATLLTSLSLPFLRLDGST 665 Query: 93 TLDKDPCTIQEWNE---GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIE 149 K ++++N + + G GLNL G + L+ F + W+ Q + Sbjct: 666 PAQKRQSLVEDFNRFPTNRCFAFLLSAKAGGTGLNL-IGASRLILFDVDWNPATDIQAMA 724 Query: 150 RIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 RI + G KR +Y ++ + +++E + QR TK + D ++ Sbjct: 725 RI-----HRDGQKRHCRIYRILLKGSLEEKIWQRQVTKLGLADSVME 766 >gi|170092399|ref|XP_001877421.1| chromodomain-helicase DNA-binding protein [Laccaria bicolor S238N-H82] gi|164647280|gb|EDR11524.1| chromodomain-helicase DNA-binding protein [Laccaria bicolor S238N-H82] Length = 1291 Score = 93.5 bits (231), Expect = 2e-17, Method: Composition-based stats. Identities = 28/170 (16%), Positives = 66/170 (38%), Gaps = 20/170 (11%) Query: 50 EVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQ----------KAFPQGRTLDKD 97 ++ K+ L+ ++ + + +++ L L + + Sbjct: 584 VMNSGKMVLLDKLLARLRQDGHRVLIFSQMVRMLDILSDYMSLRGYLHQRLDGMVASEAR 643 Query: 98 PCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTR 155 +I +N P + G G+NL + ++ F W+ + Q + R Sbjct: 644 KKSIAHFNTPGSPDFAFLLSTRAGGLGINL-ETADTVIIFDSDWNPQNDLQAMAR----- 697 Query: 156 QRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIHV 205 + G K V VY ++++T++E VL+R + K ++ ++N + H+ Sbjct: 698 AHRIGQKSHVSVYRFVSKDTMEEDVLERAKKKMVLEYAIINQMDTSQAHL 747 >gi|320592804|gb|EFX05213.1| snf2 family helicase ATPase [Grosmannia clavigera kw1407] Length = 901 Score = 93.5 bits (231), Expect = 2e-17, Method: Composition-based stats. Identities = 27/140 (19%), Positives = 52/140 (37%), Gaps = 18/140 (12%) Query: 68 AAPIIVAYHFNSDLARLQK----------AFPQGRTLDKDPCT-IQEWNEGKI-PLLFAH 115 +++ F + L L+ G D + I+ +N L Sbjct: 673 GHKVLIFSQFKTQLDLLEAYCAELRGWAVCRIDGSVAHADRQSQIELFNADAAHRLFLLS 732 Query: 116 PASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNT 175 + G G+NL + ++ F W+ ++ Q R + G R V VY L + T Sbjct: 733 TRAGGQGINL-ASADTVILFDSDWNPQQDLQA-----QDRAHRIGQTRPVVVYRLATKGT 786 Query: 176 IDELVLQRLRTKSTIQDLLL 195 ++E +L K ++ L++ Sbjct: 787 VEEELLLSADAKRRLEKLVI 806 >gi|70953850|ref|XP_746001.1| PfSNF2L [Plasmodium chabaudi chabaudi] gi|56526492|emb|CAH76599.1| PfSNF2L, putative [Plasmodium chabaudi chabaudi] Length = 879 Score = 93.5 bits (231), Expect = 2e-17, Method: Composition-based stats. Identities = 41/221 (18%), Positives = 89/221 (40%), Gaps = 38/221 (17%) Query: 6 KFQRELYCDLQGENIEAFNSAS-----KTVKCLQL---ANGAVYYD--------EEKHWK 49 K Q++LY D+ +NI+ N+ + +QL N +D E H + Sbjct: 29 KLQKKLYSDILSKNIDVINAMTGSKNQMLNILMQLRKCCNHPYLFDGIEEPPYIEGNHIE 88 Query: 50 EVHDEKIKALEVIIEKANA--APIIVAYHFNSDLARL---------QKAFPQGRTLDKDP 98 K+ L+ ++ + + +++ L + + G T+ + Sbjct: 89 --TSGKMSLLDKLLPRLKKENSRVLLFSQMTRLLDIIDDYCRWKKYEYLRIDGSTVGDER 146 Query: 99 CT-IQEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTR 155 I ++NE K + + G G+NL +I++ F ++ + Q ++R Sbjct: 147 QIRINKFNEPNSKYFIFLLSTTAGGIGINLTT-ADIVILFDSDYNPQMDIQAMDR----- 200 Query: 156 QRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + G K+ V VY + N+++E +++R K + L++ Sbjct: 201 AHRIGQKKRVIVYRFVTHNSVEEKIVERAPKKLKLDSLIIQ 241 >gi|239606662|gb|EEQ83649.1| chromatin remodelling complex ATPase chain ISW1 [Ajellomyces dermatitidis ER-3] gi|327351568|gb|EGE80425.1| ISWI chromatin-remodeling complex ATPase ISW1 [Ajellomyces dermatitidis ATCC 18188] Length = 1132 Score = 93.5 bits (231), Expect = 2e-17, Method: Composition-based stats. Identities = 44/239 (18%), Positives = 88/239 (36%), Gaps = 46/239 (19%) Query: 1 MKQY---HKFQRELYCDLQGENIEAFNSAS--------KTVKCLQLAN------------ 37 M Y Q + Y + ++I+A N A +QL Sbjct: 428 MNLYVGMSDMQVKWYQKILEKDIDAVNGAQGKRESKTRLLNIVMQLRKCCNHPYLFEGAE 487 Query: 38 -GAVYYDEEKHWKEVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARL---------Q 85 G Y +E + K+ L+ I+++ + +++ + L L Q Sbjct: 488 PGPPYTTDEHLI--DNAGKMVILDKILKRMKNQGSRVLIFSQMSRVLDILEDYCVFREHQ 545 Query: 86 KAFPQGRTLDKDP-CTIQEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLE 142 G T +D I E+N + + + G G+NL +I++ + W+ + Sbjct: 546 YCRIDGSTAHEDRIAAIDEYNRPGSEKFIFLLTTRAGGLGINLT-SADIVILYDSDWNPQ 604 Query: 143 EHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 Q ++R + G + V V+ + +N I+E VL+R K + L++ + + Sbjct: 605 ADLQAMDR-----AHRIGQTKQVIVFRFVTENAIEEKVLERAAQKLRLDQLVIQQGRAQ 658 >gi|156086846|ref|XP_001610830.1| chromo-helicase DNA-binding protein [Babesia bovis T2Bo] gi|154798083|gb|EDO07262.1| chromo-helicase DNA-binding protein, putative [Babesia bovis] Length = 1729 Score = 93.5 bits (231), Expect = 2e-17, Method: Composition-based stats. Identities = 24/164 (14%), Positives = 61/164 (37%), Gaps = 20/164 (12%) Query: 53 DEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQKAFPQGRTLDKD----------PCT 100 KI L+ ++ + +++ L + + + Sbjct: 1039 SGKICLLDKLLARLKERGHRVLIFSQMVRMLNIISEYLTMRGFKHQRLDGTMGREVRKKA 1098 Query: 101 IQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQ 158 + +N+ + G G+NL + ++ + W+ + Q R + Sbjct: 1099 MDHFNDPNSDDFCFLLSTKAGGLGINLTT-ADTVIIYDSDWNPQNDLQAEAR-----AHR 1152 Query: 159 AGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKET 202 G + V +Y L+ +++I++ +L+R +TK + L++ L K+ Sbjct: 1153 IGQTKTVQIYRLVTKDSIEQTILERAKTKMVLDALVVQGLNKKG 1196 >gi|119479095|ref|XP_001259576.1| nucleosome remodeling complex ATPase subunit (Snf2h), putative [Neosartorya fischeri NRRL 181] gi|119407730|gb|EAW17679.1| nucleosome remodeling complex ATPase subunit (Snf2h), putative [Neosartorya fischeri NRRL 181] Length = 967 Score = 93.5 bits (231), Expect = 2e-17, Method: Composition-based stats. Identities = 36/185 (19%), Positives = 66/185 (35%), Gaps = 22/185 (11%) Query: 14 DLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIV 73 +L I K LQ V + + D+ + E ++ + + Sbjct: 483 ELGEHLINQSGKFLVLKKLLQ---HYVTTETKVIVFSNFDQCLNLCEDLVMMLQGSNRVF 539 Query: 74 AYHFNSDLARLQKAFPQGRTLDKDPCTIQ--EWNEGKIPLLFAHPASCGHGLNLQYGGNI 131 Y A GRT + N+ + + + G GLNL ++ Sbjct: 540 EY-----------ARLDGRTTGPWRKVMVHLFQNDPRYKVFLISIRAGGEGLNLT-SSSV 587 Query: 132 LVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQ 191 +VF W+ + +Q R+ + G R V +Y L + T++E + +RL K+ I Sbjct: 588 VVFLDEDWNPQVMRQAEARV-----HRIGQTRPVVIYKLRSTGTVEEQMSRRLVKKAYIA 642 Query: 192 DLLLN 196 D + Sbjct: 643 DRVTE 647 >gi|325089685|gb|EGC42995.1| chromodomain helicase [Ajellomyces capsulatus H88] Length = 1552 Score = 93.5 bits (231), Expect = 2e-17, Method: Composition-based stats. Identities = 31/151 (20%), Positives = 59/151 (39%), Gaps = 20/151 (13%) Query: 51 VHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQKAFPQG----RTLDKD------P 98 K+ L+ ++ K + +++ L L + LD Sbjct: 782 TSSGKMMLLDQLLAKLKKDGHRVLIFSQMVRMLDILADYMDIRGYAYQRLDGTIAAGPRR 841 Query: 99 CTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 +I+ +N + + G G+NL + +V F W+ + Q + R Sbjct: 842 LSIEHFNAPESSDFAFLLSTRAGGLGINLMT-ADTVVLFDSDWNPQADLQAMAR-----A 895 Query: 157 RQAGFKRAVFVYYLIAQNTIDELVLQRLRTK 187 + G R V VY L++++T++E VL+R R K Sbjct: 896 HRIGQTRPVSVYRLVSKDTVEEEVLERARNK 926 >gi|296808475|ref|XP_002844576.1| RAD54B protein [Arthroderma otae CBS 113480] gi|238844059|gb|EEQ33721.1| RAD54B protein [Arthroderma otae CBS 113480] Length = 960 Score = 93.5 bits (231), Expect = 2e-17, Method: Composition-based stats. Identities = 27/104 (25%), Positives = 45/104 (43%), Gaps = 9/104 (8%) Query: 96 KDPCTIQEWNEGK---IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIG 152 K + ++N + G GLNL G + LV F + W+ Q + RI Sbjct: 691 KRQALVDDFNRSSPSACFAFLLSAKAGGTGLNL-IGASRLVLFDVDWNPATDLQAMARI- 748 Query: 153 VTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + G KR +Y L+ + I+E + QR TK + D +++ Sbjct: 749 ----HRDGQKRHCHIYRLLLKGGIEEKIWQRQVTKLGLADSVMD 788 >gi|320031640|gb|EFW13600.1| SNF2 family helicase/ATPase [Coccidioides posadasii str. Silveira] Length = 1123 Score = 93.5 bits (231), Expect = 2e-17, Method: Composition-based stats. Identities = 39/231 (16%), Positives = 87/231 (37%), Gaps = 43/231 (18%) Query: 6 KFQRELYCDLQGENIEAFNSAS--------KTVKCLQLAN-------------GAVYYDE 44 + Q + Y + ++I+A N A +QL G Y + Sbjct: 431 EMQVKWYQKILEKDIDAVNGAQGKRESKTRLLNIVMQLRKCCNHPYLFEGAEPGPPYTTD 490 Query: 45 EKHWKEVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQ---------KAFPQGRT 93 E + K+ L+ ++++ + +++ + L L+ G T Sbjct: 491 EHLV--DNAGKMVILDKLLKRLKNQGSRVLIFSQMSRVLDILEDYCVFREHAYCRIDGST 548 Query: 94 LDKDP-CTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 +D I ++N + + + G G+NL +I++ + W+ + Q ++R Sbjct: 549 AHEDRIAAIDDYNRPESDKFIFLLTTRAGGLGINLT-SADIVILYDSDWNPQADLQAMDR 607 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 + G + V V+ + +N I+E VL+R K + L++ + + Sbjct: 608 -----AHRIGQTKQVVVFRFVTENAIEEKVLERAAQKLRLDQLVIQQGRAQ 653 >gi|119192338|ref|XP_001246775.1| conserved hypothetical protein [Coccidioides immitis RS] Length = 1075 Score = 93.5 bits (231), Expect = 2e-17, Method: Composition-based stats. Identities = 39/231 (16%), Positives = 87/231 (37%), Gaps = 43/231 (18%) Query: 6 KFQRELYCDLQGENIEAFNSAS--------KTVKCLQLAN-------------GAVYYDE 44 + Q + Y + ++I+A N A +QL G Y + Sbjct: 383 EMQVKWYQKILEKDIDAVNGAQGKRESKTRLLNIVMQLRKCCNHPYLFEGAEPGPPYTTD 442 Query: 45 EKHWKEVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQ---------KAFPQGRT 93 E + K+ L+ ++++ + +++ + L L+ G T Sbjct: 443 EHLV--DNAGKMVILDKLLKRLKNQGSRVLIFSQMSRVLDILEDYCVFREHAYCRIDGST 500 Query: 94 LDKDP-CTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 +D I ++N + + + G G+NL +I++ + W+ + Q ++R Sbjct: 501 AHEDRIAAIDDYNRPESDKFIFLLTTRAGGLGINLT-SADIVILYDSDWNPQADLQAMDR 559 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 + G + V V+ + +N I+E VL+R K + L++ + + Sbjct: 560 -----AHRIGQTKQVVVFRFVTENAIEEKVLERAAQKLRLDQLVIQQGRAQ 605 >gi|323452051|gb|EGB07926.1| hypothetical protein AURANDRAFT_26999 [Aureococcus anophagefferens] Length = 639 Score = 93.5 bits (231), Expect = 2e-17, Method: Composition-based stats. Identities = 23/143 (16%), Positives = 54/143 (37%), Gaps = 18/143 (12%) Query: 66 ANAAPIIVAYHFNSDLARL---------QKAFPQGRTLDKDPCTIQE-WNEG--KIPLLF 113 A + +++ L L + G T D + + +N + Sbjct: 444 AQDSRVLIFSQMTRMLDILEDYMRLNQYKYCRIDGSTSGDDRDSQMDVFNAPGSEKFAFL 503 Query: 114 AHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQ 173 + G G+NL +I+V + W+ + Q ++R + G + V V+ + + Sbjct: 504 LSTRAGGLGINL-ATADIVVLYDSDWNPQVDLQAMDR-----AHRIGQTKPVTVFRFVTE 557 Query: 174 NTIDELVLQRLRTKSTIQDLLLN 196 T++E +++R K + ++ Sbjct: 558 GTVEEKIIERADRKLFLDAAVIQ 580 >gi|310791654|gb|EFQ27181.1| SNF2 family domain-containing protein [Glomerella graminicola M1.001] Length = 1458 Score = 93.5 bits (231), Expect = 2e-17, Method: Composition-based stats. Identities = 38/225 (16%), Positives = 85/225 (37%), Gaps = 33/225 (14%) Query: 2 KQYHKF---QRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKA 58 K Y + + + D QG A ++ ++ +L N + E ++ + Sbjct: 820 KLYKQMVTHNKIVVSDGQGGKAGARGLSNMIMQLRKLCNHPFVFGEVENTMNPLNISNDM 879 Query: 59 LE------VIIEK------ANAAPIIVAYHFNSDLAR---------LQKAFPQGRTL-DK 96 L ++++ A +++ + + + L+ G T D+ Sbjct: 880 LWRTAGKFELLDRVLPKYKATGHRVLMFFQMTAIMDIMEDYLRYRNLKYLRLDGTTKSDE 939 Query: 97 DPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 ++E+N + + G GLNLQ + ++ + W+ + Q Sbjct: 940 RSDLLREFNAPDSEYFMFLLSTRAGGLGLNLQT-ADTVIIYDSDWNPHQDLQA-----QD 993 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 R + G K V + LI+ N+++E +L+R R K + ++ A + Sbjct: 994 RAHRIGQKNEVRILRLISSNSVEEKILERARFKLDMDGKVIQAGR 1038 >gi|302819164|ref|XP_002991253.1| hypothetical protein SELMODRAFT_429604 [Selaginella moellendorffii] gi|300140964|gb|EFJ07681.1| hypothetical protein SELMODRAFT_429604 [Selaginella moellendorffii] Length = 959 Score = 93.5 bits (231), Expect = 2e-17, Method: Composition-based stats. Identities = 25/137 (18%), Positives = 51/137 (37%), Gaps = 17/137 (12%) Query: 65 KANAAPIIVAYHFNSDLARLQKAFPQG-----------RTLDKDPCTIQEWNEGKIPLLF 113 +A IV + S L L+ + +++D + ++ ++ Sbjct: 801 RAETEKAIVFSQWTSMLDLLEPQLRKADLRFSRLDGTMTVVERDSAVTEFNTNPEVSVMI 860 Query: 114 AHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQ 173 + GLN+ ++L+ +WW+ Q I+R + G R V V + Sbjct: 861 MSLKAASLGLNMVAACHVLLL-DVWWNPTTEDQAIDR-----AHRIGQTRPVHVSRFTVK 914 Query: 174 NTIDELVLQRLRTKSTI 190 NTI++ +L K + Sbjct: 915 NTIEDRILALQERKKQM 931 >gi|255077555|ref|XP_002502414.1| SNF2 super family [Micromonas sp. RCC299] gi|226517679|gb|ACO63672.1| SNF2 super family [Micromonas sp. RCC299] Length = 1050 Score = 93.5 bits (231), Expect = 2e-17, Method: Composition-based stats. Identities = 32/118 (27%), Positives = 53/118 (44%), Gaps = 8/118 (6%) Query: 86 KAFPQGRTLDKDPC-TIQEWNEGK-IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEE 143 A G T KD + ++N + + + + G GLN+ N +V F W+ + Sbjct: 659 YARLDGSTAGKDRQKLVDDFNASESLFVFLLSTGAGGVGLNIT-SANRVVIFDPNWNPAK 717 Query: 144 HQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 Q R + G +R V VY L+A TI+E+V QR K ++ ++A K+ Sbjct: 718 DAQA-----QDRAYRIGQRRDVDVYRLLAAGTIEEMVYQRQVYKQQQSNVAVDASKER 770 >gi|159476244|ref|XP_001696221.1| SNF2/RAD54 family protein [Chlamydomonas reinhardtii] gi|158282446|gb|EDP08198.1| SNF2/RAD54 family protein [Chlamydomonas reinhardtii] Length = 1877 Score = 93.5 bits (231), Expect = 2e-17, Method: Composition-based stats. Identities = 32/169 (18%), Positives = 58/169 (34%), Gaps = 22/169 (13%) Query: 43 DEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQK-------------A 87 D E + K++ E +++ A ++ L +K Sbjct: 1185 DAEDYGNPARSGKLRVAERVLDSWRAAGHKALLFCQTQQMLDIFEKLARSKKSPAWSYHR 1244 Query: 88 FPQGRTLDKDPCTIQEWNE-GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 G + I ++N + L G G+NL G ++ + W+ Q Sbjct: 1245 MDGGTPVASRSRLIDDFNNNPDVFLFLLTTKVGGLGVNLT-GATRVMLYDPDWNPSTDIQ 1303 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 ER + G + V +Y LI TI+E V R K+ + + +L Sbjct: 1304 ARERAW-----RIGQSQPVTIYRLITAGTIEEKVYHRQIYKNFLTNKVL 1347 >gi|156064177|ref|XP_001598010.1| hypothetical protein SS1G_00096 [Sclerotinia sclerotiorum 1980] gi|154690958|gb|EDN90696.1| hypothetical protein SS1G_00096 [Sclerotinia sclerotiorum 1980 UF-70] Length = 1103 Score = 93.5 bits (231), Expect = 2e-17, Method: Composition-based stats. Identities = 29/163 (17%), Positives = 61/163 (37%), Gaps = 20/163 (12%) Query: 53 DEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAFPQ-----------GRTLDKDPC 99 K++ ++ +++ K ++ L L++ + G + Sbjct: 756 SGKMQVVKALLQMWKGYGHKTLLFSQGVQMLDILEEFVKKLGGFNYLRMDGGTAIKDRQT 815 Query: 100 TIQEWNE-GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQ 158 + ++N + + G G+NL G N ++ F W+ Q ER + Sbjct: 816 LVDQFNNDPNMHVFLLTTKVGGLGVNLT-GANRVIIFDPDWNPSTDVQARERAW-----R 869 Query: 159 AGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 G K+ V +Y L+ TI+E + R K + + +L K+ Sbjct: 870 LGQKKEVTIYRLMTAGTIEEKIYHRQIFKQFLTNKILKDPKQR 912 >gi|134055853|emb|CAK96198.1| unnamed protein product [Aspergillus niger] Length = 1007 Score = 93.5 bits (231), Expect = 2e-17, Method: Composition-based stats. Identities = 34/174 (19%), Positives = 70/174 (40%), Gaps = 24/174 (13%) Query: 46 KHWKEVHDEKIKALEVIIEKANAA---PIIVAYHFNSDLARLQK----------AFPQGR 92 +H+ K++ L+ +++ I++ ++ S L L Sbjct: 624 RHFTPSSSAKLRVLDQLLDGLRTKTSEKIVLVSNYTSTLNLLANLLTSLSLPFLRLDGST 683 Query: 93 TLDKDPCTIQEWN---EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIE 149 K ++++N + G GLNL G + LV F + W+ Q + Sbjct: 684 PAQKRQSLVEDFNRLPSNLCFAFLLSAKAGGTGLNL-IGASRLVLFDVDWNPATDIQAMA 742 Query: 150 RIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETI 203 RI + G KR +Y ++ + +++E + QR TK + D ++ KK+++ Sbjct: 743 RI-----HRDGQKRHCRIYRILLKGSLEEKIWQRQVTKIGLADSVME--KKDSV 789 >gi|50555271|ref|XP_505044.1| YALI0F05698p [Yarrowia lipolytica] gi|74632870|sp|Q6C2R8|RAD5_YARLI RecName: Full=DNA repair protein RAD5 gi|49650914|emb|CAG77851.1| YALI0F05698p [Yarrowia lipolytica] Length = 1025 Score = 93.5 bits (231), Expect = 2e-17, Method: Composition-based stats. Identities = 36/153 (23%), Positives = 63/153 (41%), Gaps = 17/153 (11%) Query: 53 DEKIKALEVIIEKA-NAAPIIVAYHFNSDLARLQ--------KAFPQGRTLDKDPCT--I 101 K+ AL +++ A +V F S L +Q +AF TL + T + Sbjct: 858 SSKLVALVSKLKQLPKDAKSVVFSQFTSYLDIIQTELRREKIQAFRFDGTLSRQQRTDVL 917 Query: 102 QEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGF 161 + + K +L + G GLNL + + WW + Q I+RI + G Sbjct: 918 KAFGLSKGSVLLISLKTGGVGLNLVTANHAFIM-DPWWTFAQEAQAIDRI-----HRMGQ 971 Query: 162 KRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 + V V I +N+++E +L+ + K + L Sbjct: 972 TKDVHVTRFIVENSVEEKMLKIQQQKMVLAGTL 1004 >gi|50311677|ref|XP_455865.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140] gi|74689997|sp|Q6CJM4|RAD5_KLULA RecName: Full=DNA repair protein RAD5 gi|49645001|emb|CAG98573.1| KLLA0F17479p [Kluyveromyces lactis] Length = 1114 Score = 93.5 bits (231), Expect = 2e-17, Method: Composition-based stats. Identities = 38/166 (22%), Positives = 66/166 (39%), Gaps = 27/166 (16%) Query: 50 EVHDEKIKAL----EVIIEKANAAPIIVAYHFNSDLA----RLQKAFPQGRTL------- 94 KIKAL + I E + IIV F+S L L+ P+ + + Sbjct: 935 HFQSTKIKALLRHLKQIQETSPGEQIIVFSQFSSFLDILEIELRSHLPRDQVIIYKFDGR 994 Query: 95 ---DKDPCTIQEWNEGK---IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMI 148 + ++++++ I LL + G GLNL + WW Q I Sbjct: 995 LDMKERTRILEQFHDKDLSCIKLLLLSLKTGGVGLNLTC-ASRAFMMDPWWSPGMEDQAI 1053 Query: 149 ERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 +RI + G ++ V V I N+++E +L+ K + D++ Sbjct: 1054 DRI-----HRIGQQQTVKVVRFIIDNSVEEKMLRIQERKRMLGDIV 1094 >gi|328771180|gb|EGF81220.1| hypothetical protein BATDEDRAFT_16302 [Batrachochytrium dendrobatidis JAM81] Length = 704 Score = 93.5 bits (231), Expect = 2e-17, Method: Composition-based stats. Identities = 35/176 (19%), Positives = 63/176 (35%), Gaps = 23/176 (13%) Query: 37 NGAVYYDEEKHWKEVHDEKIKALEV---IIEKANAA-PIIVAYHFNSDLARLQKAFPQGR 92 N V Y + +W+ KI+AL ++++ +A IV F S L +Q + Sbjct: 518 NSIVNYIDLANWR--SSTKIEALVEELTLLQRDDATSKSIVFSQFVSFLDLVQWRLIRAG 575 Query: 93 -----------TLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDL 141 +D + I + + G LNL + V WW+ Sbjct: 576 FNVVKLDGRMAPFQRDDVINSFMTDPSITVFLVSLKAGGVALNLTEASRVFVL-DPWWNP 634 Query: 142 EEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 Q +RI + G R + + +I +N+I+ +L K + D + Sbjct: 635 AAEDQAFDRI-----HRLGQYRPIKITRIIVENSIESRILMLQEKKKALFDSTVGG 685 >gi|317026496|ref|XP_001389729.2| DNA-dependent ATPase [Aspergillus niger CBS 513.88] Length = 993 Score = 93.5 bits (231), Expect = 2e-17, Method: Composition-based stats. Identities = 34/174 (19%), Positives = 70/174 (40%), Gaps = 24/174 (13%) Query: 46 KHWKEVHDEKIKALEVIIEKANAA---PIIVAYHFNSDLARLQK----------AFPQGR 92 +H+ K++ L+ +++ I++ ++ S L L Sbjct: 610 RHFTPSSSAKLRVLDQLLDGLRTKTSEKIVLVSNYTSTLNLLANLLTSLSLPFLRLDGST 669 Query: 93 TLDKDPCTIQEWN---EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIE 149 K ++++N + G GLNL G + LV F + W+ Q + Sbjct: 670 PAQKRQSLVEDFNRLPSNLCFAFLLSAKAGGTGLNL-IGASRLVLFDVDWNPATDIQAMA 728 Query: 150 RIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETI 203 RI + G KR +Y ++ + +++E + QR TK + D ++ KK+++ Sbjct: 729 RI-----HRDGQKRHCRIYRILLKGSLEEKIWQRQVTKIGLADSVME--KKDSV 775 >gi|307105234|gb|EFN53484.1| hypothetical protein CHLNCDRAFT_136777 [Chlorella variabilis] Length = 1320 Score = 93.5 bits (231), Expect = 2e-17, Method: Composition-based stats. Identities = 33/153 (21%), Positives = 57/153 (37%), Gaps = 17/153 (11%) Query: 56 IKALEVIIEKANAAPIIVAYHFNSDLARLQKA---------FPQGRTLDKDPCTI-QEWN 105 + AL A + +++ + L L+ G + T+ ++N Sbjct: 861 LDALLKTWRDAGSNKVLLFSNSVQTLNILKAMVTASGYDYIMLDGSVPQAERQTLCDKFN 920 Query: 106 -EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA 164 + + + G GLNL N +V F W+ Q R + G KR Sbjct: 921 TQPSTFIFLISTLAGGVGLNLT-AANKVVIFDPSWNPAMDLQA-----QDRAFRIGQKRD 974 Query: 165 VFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 V VY LIA T++E++ R K +++L Sbjct: 975 VSVYRLIAAGTMEEIIYDRQLYKQMHSEIVLEG 1007 >gi|306419500|emb|CBW48563.1| C. elegans protein Y111B2A.22b, partially confirmed by transcript evidence [Caenorhabditis elegans] Length = 1882 Score = 93.5 bits (231), Expect = 2e-17, Method: Composition-based stats. Identities = 24/104 (23%), Positives = 51/104 (49%), Gaps = 7/104 (6%) Query: 94 LDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIG 152 +++ ++ +N + K+ S G G+NL G + ++F+ W+ Q +R Sbjct: 1240 VEQRQAMMERFNADPKVFCFILSTRSGGVGVNLT-GADTVIFYDSDWNPTMDAQAQDRC- 1297 Query: 153 VTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + G R V +Y LI++ TI+E +L++ K + +L ++ Sbjct: 1298 ----HRIGQTRNVSIYRLISERTIEENILRKATQKRRLGELAID 1337 >gi|303312905|ref|XP_003066464.1| Chromatin remodeling complex ATPase chain Iswi, putative [Coccidioides posadasii C735 delta SOWgp] gi|240106126|gb|EER24319.1| Chromatin remodeling complex ATPase chain Iswi, putative [Coccidioides posadasii C735 delta SOWgp] Length = 1123 Score = 93.5 bits (231), Expect = 2e-17, Method: Composition-based stats. Identities = 39/231 (16%), Positives = 87/231 (37%), Gaps = 43/231 (18%) Query: 6 KFQRELYCDLQGENIEAFNSAS--------KTVKCLQLAN-------------GAVYYDE 44 + Q + Y + ++I+A N A +QL G Y + Sbjct: 431 EMQVKWYQKILEKDIDAVNGAQGKRESKTRLLNIVMQLRKCCNHPYLFEGAEPGPPYTTD 490 Query: 45 EKHWKEVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQ---------KAFPQGRT 93 E + K+ L+ ++++ + +++ + L L+ G T Sbjct: 491 EHLV--DNAGKMVILDKLLKRLKNQGSRVLIFSQMSRVLDILEDYCVFREHAYCRIDGST 548 Query: 94 LDKDP-CTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 +D I ++N + + + G G+NL +I++ + W+ + Q ++R Sbjct: 549 AHEDRIAAIDDYNRPESDKFIFLLTTRAGGLGINLT-SADIVILYDSDWNPQADLQAMDR 607 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 + G + V V+ + +N I+E VL+R K + L++ + + Sbjct: 608 -----AHRIGQTKQVVVFRFVTENAIEEKVLERAAQKLRLDQLVIQQGRAQ 653 >gi|328707730|ref|XP_001950458.2| PREDICTED: hypothetical protein LOC100159378 [Acyrthosiphon pisum] Length = 1320 Score = 93.5 bits (231), Expect = 2e-17, Method: Composition-based stats. Identities = 34/163 (20%), Positives = 61/163 (37%), Gaps = 24/163 (14%) Query: 53 DEKIKALEVIIE-----KANAAPIIVAYHFNSDLARLQKA-----------FPQGRTLDK 96 KIK + ++ + N I+ + S L ++K F + K Sbjct: 1145 STKIKTICDLVNQKVLIEGNKEKAIIVSQWPSFLYLIRKHLETTGNAKMEMFSGAIPIPK 1204 Query: 97 DPCTIQEWNEGKI--PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 I+E+N+ +L + G GLNL N + + W+ + Q +R+ Sbjct: 1205 RNKIIREFNQPNSGPQILLLSLKAGGVGLNL-MAANHMFLVDIHWNPQLEAQACDRV--- 1260 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + G + V+VY I NTI+ ++ K + D L Sbjct: 1261 --YRVGQTKPVYVYKFICSNTIETRIMNIQTHKLQMADNLFKG 1301 >gi|327286256|ref|XP_003227847.1| PREDICTED: DNA excision repair protein ERCC-6-like [Anolis carolinensis] Length = 1310 Score = 93.5 bits (231), Expect = 2e-17, Method: Composition-based stats. Identities = 42/197 (21%), Positives = 67/197 (34%), Gaps = 29/197 (14%) Query: 7 FQRELYCDLQGENIEAFNSA-------------SKTVKCLQLANGAVYYDEEKHWKEVHD 53 + DL G+ EA + ++ K L L EE H V Sbjct: 415 LETSSCYDLDGDENEANDVLHQNIEHLSDQVLIEESGKLLFLVALLDRLQEEGHRTLVFS 474 Query: 54 EKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLF 113 + K L IIE+ I+ F L R+ +K Q+ + + Sbjct: 475 QSRKML-DIIER-----ILTRRRFK--LMRIDGTVTHLTEREKRIGMFQK--NSEYSVFL 524 Query: 114 AHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQ 173 G GL L +V F W+ Q ++R + G K V +Y LI Sbjct: 525 LTTQVGGVGLTLT-AATRVVIFDPSWNPATDAQAVDR-----AYRIGQKANVVIYRLITC 578 Query: 174 NTIDELVLQRLRTKSTI 190 T++E + +R K ++ Sbjct: 579 GTVEEKIYRRQVFKDSL 595 >gi|159131635|gb|EDP56748.1| dsDNA-dependent ATPase (Rad54b), putative [Aspergillus fumigatus A1163] Length = 969 Score = 93.5 bits (231), Expect = 2e-17, Method: Composition-based stats. Identities = 25/113 (22%), Positives = 47/113 (41%), Gaps = 9/113 (7%) Query: 87 AFPQGRTLDKDPCTIQEWNE---GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEE 143 K ++++N + + G GLNL G + LV F + W+ Sbjct: 668 RLDGSTPAQKRQALVEDFNRLPPNRCFAFLLSAKAGGTGLNL-IGASRLVLFDVDWNPAT 726 Query: 144 HQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 Q + RI + G KR +Y ++ + +++E + QR TK + D ++ Sbjct: 727 DVQAMARI-----HRDGQKRHCRIYRILLKGSLEEKIWQRQVTKIGLADSVME 774 >gi|167378232|ref|XP_001734726.1| DNA repair and recombination protein RAD54B [Entamoeba dispar SAW760] gi|165903652|gb|EDR29108.1| DNA repair and recombination protein RAD54B, putative [Entamoeba dispar SAW760] Length = 884 Score = 93.5 bits (231), Expect = 2e-17, Method: Composition-based stats. Identities = 32/175 (18%), Positives = 63/175 (36%), Gaps = 22/175 (12%) Query: 35 LANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQ---- 90 L G +D E K K+ A + + I++ ++ L + + Sbjct: 593 LPKGEALWDMELSGKTAFLAKLLAFL----RKHKEKIVIVSNYTETLNFIAHHCKKCGYP 648 Query: 91 ------GRTLDKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLE 142 K + +N ++ + + G GLNL G N LV F W+ Sbjct: 649 YIQLDGSVAATKRTQMVNRFNNPELDEFIFLLSSKAGGCGLNLVGGAN-LVMFDPDWNPA 707 Query: 143 EHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 +Q + R+ + G K+ +Y ++ T++E + QR K + ++ Sbjct: 708 NDEQAMGRVW-----RDGQKKKCHIYRTLSAGTVEEKMYQRQIKKLELAGKVVEG 757 >gi|70996252|ref|XP_752881.1| dsDNA-dependent ATPase (Rad54b) [Aspergillus fumigatus Af293] gi|66850516|gb|EAL90843.1| dsDNA-dependent ATPase (Rad54b), putative [Aspergillus fumigatus Af293] Length = 969 Score = 93.5 bits (231), Expect = 2e-17, Method: Composition-based stats. Identities = 25/113 (22%), Positives = 47/113 (41%), Gaps = 9/113 (7%) Query: 87 AFPQGRTLDKDPCTIQEWNE---GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEE 143 K ++++N + + G GLNL G + LV F + W+ Sbjct: 668 RLDGSTPAQKRQALVEDFNRLPPNRCFAFLLSAKAGGTGLNL-IGASRLVLFDVDWNPAT 726 Query: 144 HQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 Q + RI + G KR +Y ++ + +++E + QR TK + D ++ Sbjct: 727 DVQAMARI-----HRDGQKRHCRIYRILLKGSLEEKIWQRQVTKIGLADSVME 774 >gi|238504258|ref|XP_002383360.1| SNF2 family helicase/ATPase, putative [Aspergillus flavus NRRL3357] gi|220690831|gb|EED47180.1| SNF2 family helicase/ATPase, putative [Aspergillus flavus NRRL3357] Length = 974 Score = 93.5 bits (231), Expect = 2e-17, Method: Composition-based stats. Identities = 41/231 (17%), Positives = 87/231 (37%), Gaps = 43/231 (18%) Query: 6 KFQRELYCDLQGENIEAFNSAS--------KTVKCLQLAN-------------GAVYYDE 44 + Q + Y + ++I+A N A+ +QL G Y + Sbjct: 295 EMQVKWYQKILEKDIDAVNGAAGKRESKTRLLNIVMQLRKCCNHPYLFEGAEPGPPYTTD 354 Query: 45 EKHWKEVHDEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQ---------KAFPQGRT 93 E + K+ L+ ++ + + +++ + L L+ G T Sbjct: 355 EHLV--YNAGKMSILDKLLARMQKQGSRVLIFSQMSRVLDILEDYCVFREYNYCRIDGTT 412 Query: 94 LDKDP-CTIQEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 +D I E+N+ + + G G+NL +I+V + W+ + Q ++R Sbjct: 413 AHEDRIAAIDEYNKPGSDKFVFLLTTRAGGLGINLTT-ADIVVLYDSDWNPQADLQAMDR 471 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 + G + V V+ + +N I+E VL+R K + L++ + + Sbjct: 472 -----AHRIGQTKQVVVFRFVTENAIEEKVLERAAQKLRLDQLVIQQGRAQ 517 >gi|126649341|ref|XP_001388342.1| SNF2 helicase [Cryptosporidium parvum Iowa II] gi|32398963|emb|CAD98428.1| SNF2 helicase, possible [Cryptosporidium parvum] gi|126117436|gb|EAZ51536.1| SNF2 helicase, putative [Cryptosporidium parvum Iowa II] Length = 1102 Score = 93.5 bits (231), Expect = 2e-17, Method: Composition-based stats. Identities = 45/221 (20%), Positives = 86/221 (38%), Gaps = 37/221 (16%) Query: 7 FQRELYCDLQGENIEAFNSASKTVKC------LQL--ANGAVY---------YDEEKHWK 49 QR LY DL +N++A K +QL A Y D Sbjct: 432 MQRRLYKDLLSKNVDALQEKEGGGKLRLINLAMQLRKACNHPYLFDGYEDKSVDPFGEHV 491 Query: 50 EVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQ-----KAFPQGRTLDKDPCT-- 100 + K+ ++ +I+K + + I++ L L+ + FP R Sbjct: 492 VENSGKMVLMDRLIKKLVSGGSRILIFSQMARVLDILEDYCHMRGFPYCRIDGNTSGDDR 551 Query: 101 ---IQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTR 155 I E+N+ + + G G+NL +I++ + W+ + Q ++R Sbjct: 552 DRQISEFNKPNSEKLVFLLSTRAGGLGINL-ATADIVILYDSDWNPQADLQAMDR----- 605 Query: 156 QRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + G K+ VFV+ L ++TI+E +++R K + ++ Sbjct: 606 AHRIGQKKPVFVFRLCHEHTIEEKIIERANLKLQLDFAIIQ 646 >gi|326428818|gb|EGD74388.1| hypothetical protein PTSG_12442 [Salpingoeca sp. ATCC 50818] Length = 1313 Score = 93.5 bits (231), Expect = 2e-17, Method: Composition-based stats. Identities = 31/195 (15%), Positives = 62/195 (31%), Gaps = 32/195 (16%) Query: 23 FNSASKTVKCLQLANGAVYYDEEKHWKEVH------------DEKIKALEVIIEKA--NA 68 +A+ QL G +E+ + K++ ++E+ Sbjct: 555 TTAAALNGADSQLHAGMSTVLDEETVNAIFNPHVSLHDVVKQSGKLRFCVHLLEQLRQEG 614 Query: 69 APIIVAYHFNSDLARLQKAFPQGRTL-----------DKDPCTIQEWNEG-KIPLLFAHP 116 ++ L + + D+ + ++N I + Sbjct: 615 HRALLFSQSLKMLDIISAVLNEQGVKHSRLHGAISDTDERQKIVDDFNSDASIFCMLLTT 674 Query: 117 ASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTI 176 G GL L G + ++ F W+ Q ++R + G R V VY LI TI Sbjct: 675 QVGGVGLTLT-GADRVIIFDPSWNPSTDAQAVDR-----AYRIGQTRRVVVYRLITCGTI 728 Query: 177 DELVLQRLRTKSTIQ 191 +E + ++ K + Sbjct: 729 EEKIYRKQVFKDGLS 743 >gi|320581684|gb|EFW95903.1| Nucleosome remodeling factor [Pichia angusta DL-1] Length = 1384 Score = 93.5 bits (231), Expect = 2e-17, Method: Composition-based stats. Identities = 28/159 (17%), Positives = 62/159 (38%), Gaps = 20/159 (12%) Query: 52 HDEKIKALEVIIEKAN--AAPIIVAYHFNSDLARL----------QKAFPQGRTLDKDPC 99 K+ L+ ++ K + +++ L + + + K Sbjct: 673 SSGKMVLLDQLLNKLHRDGHRVLIFSQMVRILDIIGDYLQLKGHSFQRLDGTISSHKRRL 732 Query: 100 TIQEWNE--GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 I +N K + + G G+NL + ++ F W+ + Q + R Sbjct: 733 AIDHFNAEGSKDFVFLLSTRAGGLGINLMT-ADTVIIFDSDWNPQADLQAMAR-----AH 786 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + G K V VY ++++T++E VL+R R K ++ +++ Sbjct: 787 RIGQKNHVMVYRFVSKDTVEEQVLERARRKMILEYAIIS 825 >gi|19074741|ref|NP_586247.1| similarity to THE ATPase COMPONENT OF THE TWO-SUBUNIT CHROMATIN REMODELING FACTOR [Encephalitozoon cuniculi GB-M1] gi|19069383|emb|CAD25851.1| similarity to THE ATPase COMPONENT OF THE TWO-SUBUNIT CHROMATIN REMODELING FACTOR [Encephalitozoon cuniculi GB-M1] Length = 823 Score = 93.5 bits (231), Expect = 2e-17, Method: Composition-based stats. Identities = 37/171 (21%), Positives = 71/171 (41%), Gaps = 22/171 (12%) Query: 41 YYDEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQ---------KAFP 89 Y ++ KH E + K+ L+ ++ A + +++ + L L+ Sbjct: 341 YTND-KHIIE-NSGKMIVLDKLLASLKAKGSRVLIFSQMSMMLDILEDYAMFREYEYCRI 398 Query: 90 QGRTLDKDPC-TIQEWNE--GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 G T +D I +N + L + G G+NL + ++ F W+ + Q Sbjct: 399 DGSTSYRDRTEAIDGFNAEGSEKFLFLLTTRAGGLGINLST-ADTVILFDSDWNPQMDLQ 457 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 R + G K+ V V+ LI++NT++E ++ R K + D+LL Sbjct: 458 A-----QDRAHRIGQKKQVVVFRLISENTVEERIVYRSLQKLKLDDILLQG 503 >gi|326473172|gb|EGD97181.1| SNF2 family helicase/ATPase [Trichophyton tonsurans CBS 112818] Length = 1113 Score = 93.5 bits (231), Expect = 2e-17, Method: Composition-based stats. Identities = 42/231 (18%), Positives = 85/231 (36%), Gaps = 43/231 (18%) Query: 6 KFQRELYCDLQGENIEAFNSAS--------KTVKCLQLAN-------------GAVYYDE 44 + Q + Y + ++I+A N A +QL G Y + Sbjct: 428 EMQVKWYQKILEKDIDAVNGAQGNRESKTRLLNIVMQLRKCCNHPYLFEGAEPGPPYTTD 487 Query: 45 EKHWKEVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQ---------KAFPQGRT 93 E + K+ L+ ++ + + +++ + L L+ G T Sbjct: 488 EHLI--DNSGKMVILDKLLNRLFKQGSRVLIFSQMSRVLDILEDYCVFRGHEYCRIDGST 545 Query: 94 LDKDP-CTIQEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 +D I E+N K + + G G+NL +I++ F W+ + Q ++R Sbjct: 546 AHEDRIQAIDEYNRPGSKKFVFLLTTRAGGLGINLTT-ADIVILFDSDWNPQADLQAMDR 604 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 + G + V V+ I + I+E VL+R K + L++ + + Sbjct: 605 -----AHRIGQTKQVVVFRFITEKAIEEKVLERAAQKLRLDQLVIQQGRAQ 650 >gi|302819037|ref|XP_002991190.1| hypothetical protein SELMODRAFT_429547 [Selaginella moellendorffii] gi|300141018|gb|EFJ07734.1| hypothetical protein SELMODRAFT_429547 [Selaginella moellendorffii] Length = 959 Score = 93.5 bits (231), Expect = 2e-17, Method: Composition-based stats. Identities = 25/137 (18%), Positives = 51/137 (37%), Gaps = 17/137 (12%) Query: 65 KANAAPIIVAYHFNSDLARLQKAFPQG-----------RTLDKDPCTIQEWNEGKIPLLF 113 +A IV + S L L+ + +++D + ++ ++ Sbjct: 801 RAETEKAIVFSQWTSMLDLLEPQLRKADLRFSRLDGTMTVVERDSAVTEFNTNPEVSVMI 860 Query: 114 AHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQ 173 + GLN+ ++L+ +WW+ Q I+R + G R V V + Sbjct: 861 MSLKAASLGLNMVAACHVLLL-DVWWNPTTEDQAIDR-----AHRIGQTRPVHVSRFTVK 914 Query: 174 NTIDELVLQRLRTKSTI 190 NTI++ +L K + Sbjct: 915 NTIEDRILALQERKKQM 931 >gi|156384005|ref|XP_001633122.1| predicted protein [Nematostella vectensis] gi|156220188|gb|EDO41059.1| predicted protein [Nematostella vectensis] Length = 627 Score = 93.5 bits (231), Expect = 2e-17, Method: Composition-based stats. Identities = 29/159 (18%), Positives = 68/159 (42%), Gaps = 19/159 (11%) Query: 52 HDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARL---------QKAFPQGRT-LDKDPC 99 K + L ++ + N +++ F + + + G+T + + Sbjct: 468 DSGKFERLNAMLPEMKDNGDRVLLFSQFTLVMDIIEVYLQHCGYRYFRLDGQTPVVERQP 527 Query: 100 TIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQ 158 I +N + I L + G G+NL N+++ + ++ +Q +R + Sbjct: 528 MIDNFNSDPDIFLFLLSTKAGGLGINLT-SANVVILHDIDFNPYNDKQAEDRC-----HR 581 Query: 159 AGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 G R V VY LIA++T+++ +L+ +K ++ +++A Sbjct: 582 VGQTRDVHVYRLIAKDTVEDNMLKCANSKLKLEKDVVSA 620 >gi|14195095|sp|P79051|RHP16_SCHPO RecName: Full=ATP-dependent helicase rhp16; AltName: Full=DNA repair protein rhp16; AltName: Full=RAD16 homolog Length = 861 Score = 93.5 bits (231), Expect = 2e-17, Method: Composition-based stats. Identities = 37/160 (23%), Positives = 63/160 (39%), Gaps = 21/160 (13%) Query: 52 HDEKIKALEV----IIEKANAAPIIVAYHFNSDLA----RLQKA------FPQGRTLDKD 97 KI+AL + +K IV F S L RL+KA G T Sbjct: 688 SSTKIEALVEELYLLRKKDRTLKSIVFSQFTSMLDLIHWRLRKAGFNCVKLDGGMTPKAR 747 Query: 98 PCTIQEW-NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 TI+ + N+ I + + G LNL + + WW+ Q ++RI Sbjct: 748 AATIEAFSNDINITIFLVSLKAGGVALNLTE-ASQVFMMDPWWNGAVQWQAMDRI----- 801 Query: 157 RQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + G KR + V L +N+I+ +++ K+ + ++ Sbjct: 802 HRIGQKRPIKVITLCIENSIESKIIELQEKKAQMIHATID 841 >gi|327351256|gb|EGE80113.1| transcriptional accessory protein [Ajellomyces dermatitidis ATCC 18188] Length = 1913 Score = 93.5 bits (231), Expect = 2e-17, Method: Composition-based stats. Identities = 37/209 (17%), Positives = 71/209 (33%), Gaps = 30/209 (14%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEV 61 K+Y + Q+ + +I A K L D + ++ Sbjct: 1635 KRYDEIQKS--LAGKNSHIRDVAHAPKLTALRDL-----LVDCGIGVDPSTEGELDTGAS 1687 Query: 62 IIEKANAAPIIVAYHFNSDLARLQK-------------AFPQGRTLDKDPCTIQEWN-EG 107 + +V L +Q K + ++N + Sbjct: 1688 YVSP---HRALVFCQMKEMLDIVQNDVLKKLLPSVQYLRLDGSVEATKRQNIVNQFNTDP 1744 Query: 108 KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFV 167 +L + G GLNL G + ++F W+ ++ Q ++R + G K+ V V Sbjct: 1745 SYDVLLLTTSVGGLGLNLT-GADTVIFVEHDWNPQKDIQAMDR-----AHRIGQKKVVNV 1798 Query: 168 YYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 Y LI + T++E +L R K + ++N Sbjct: 1799 YRLITRGTLEEKILNLQRFKIDVASTVVN 1827 >gi|325179864|emb|CCA14266.1| hypothetical protein SORBIDRAFT_03g009030 [Albugo laibachii Nc14] Length = 938 Score = 93.5 bits (231), Expect = 2e-17, Method: Composition-based stats. Identities = 32/149 (21%), Positives = 58/149 (38%), Gaps = 18/149 (12%) Query: 65 KANAAPIIVAYHFNSDLARLQKAFP---------QGRTLDKDPC-TIQEWNEGK--IPLL 112 K +++ L L++ G T K+ + ++N+ + I + Sbjct: 499 KDQGHRVLLFTQTRMMLDILERLMEHLGYNHCRLDGSTPVKERQRLLDKFNDAESGIFIF 558 Query: 113 FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIA 172 + G G+NL G N +V F W+ Q ER + G + V +Y LI Sbjct: 559 LLTTRAGGIGINL-AGANRVVIFDPDWNPSTDMQARERSW-----RIGQIKQVTIYRLIT 612 Query: 173 QNTIDELVLQRLRTKSTIQDLLLNALKKE 201 TI+E + R K + +L+ K++ Sbjct: 613 SGTIEEKIYHRQIFKQYLTTKVLHDPKRK 641 >gi|295669680|ref|XP_002795388.1| chromodomain helicase hrp3 [Paracoccidioides brasiliensis Pb01] gi|226285322|gb|EEH40888.1| chromodomain helicase hrp3 [Paracoccidioides brasiliensis Pb01] Length = 1520 Score = 93.5 bits (231), Expect = 2e-17, Method: Composition-based stats. Identities = 32/164 (19%), Positives = 61/164 (37%), Gaps = 20/164 (12%) Query: 38 GAVYYDEEKHWKEVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQKAFPQG---- 91 G +E K+ L+ ++ K + +++ L L Sbjct: 758 GKTGREEMMRAIITSSGKMMLLDQLLAKLRKDGHRVLIFSQMVRMLDILADYMDVRGYAY 817 Query: 92 RTLDKD------PCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEE 143 + LD +I+ +N + G G+NL + +V F W+ + Sbjct: 818 QRLDGTIAAGPRRLSIEHFNAPDSNDFAFLLSTRAGGLGINLMT-ADTVVLFDSDWNPQA 876 Query: 144 HQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTK 187 Q + R + G + V VY L++++T++E VL+R R K Sbjct: 877 DLQAMAR-----AHRIGQTKPVSVYRLVSKDTVEEEVLERARNK 915 >gi|190345081|gb|EDK36901.2| hypothetical protein PGUG_00999 [Meyerozyma guilliermondii ATCC 6260] Length = 542 Score = 93.5 bits (231), Expect = 2e-17, Method: Composition-based stats. Identities = 41/213 (19%), Positives = 77/213 (36%), Gaps = 35/213 (16%) Query: 2 KQYHK-----FQRELYCDLQG---------ENIEAFNSASKTVKCLQLANGAVYYDEEKH 47 K Y + +++ + + E++E + C++ + Y E+K Sbjct: 314 KLYDEEKLKQMAKDIMKEPEYVEANEQYIYEDMEVMSDYELNNLCVKFPTLSKYVLEDKE 373 Query: 48 WKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTL----------D 95 W ++ K+ L I++ A ++V F L L+K G D Sbjct: 374 W--LNSGKVGLLMDHIKEIMARKERVLVFSLFTQMLDILEKVLTIGNIKFLRLDGQTSVD 431 Query: 96 KDPCTIQEWNEGK-IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 I + + IP+ + G G+NL N+++F + +R Sbjct: 432 TRQDLIDTFYDDDTIPVFLLSTKAGGFGINLVAANNVVIFD------QSFNPHDDRQAED 485 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTK 187 R + G V V I++ TI+E +LQ K Sbjct: 486 RAHRVGQTSEVLVTRFISKGTIEENMLQLAENK 518 >gi|171687152|ref|XP_001908517.1| hypothetical protein [Podospora anserina S mat+] gi|170943537|emb|CAP69190.1| unnamed protein product [Podospora anserina S mat+] Length = 974 Score = 93.5 bits (231), Expect = 2e-17, Method: Composition-based stats. Identities = 33/170 (19%), Positives = 67/170 (39%), Gaps = 24/170 (14%) Query: 52 HDEKIKALEVIIE----KANAAPIIVAYHFNSDLARLQKAFPQGRTL----------DKD 97 H K KA +I+ +A II+ + L+ L + Q + Sbjct: 732 HSTKTKATLDLIDGWQSEAPEDKIIIFVQWIPMLSILGRMLTQSGYRFVYFWGDLDQNDQ 791 Query: 98 PCTIQEWNE-GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 +++ + + + ++ A HGLNL N + + WW++ QQ R+ Sbjct: 792 EQSLKTFRKVPAVKIMLASITCTAHGLNLTV-ANRAIMYDHWWNVCRQQQAFGRV----- 845 Query: 157 RQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNAL---KKETI 203 + G + V ++ ++DE ++Q + K T +++ + KK I Sbjct: 846 HRIGQTKEVHTAKIVVGGSVDERIIQIQQDKETAISGVMDGMDEIKKRPI 895 >gi|312374254|gb|EFR21844.1| hypothetical protein AND_16270 [Anopheles darlingi] Length = 476 Score = 93.5 bits (231), Expect = 2e-17, Method: Composition-based stats. Identities = 25/153 (16%), Positives = 57/153 (37%), Gaps = 21/153 (13%) Query: 56 IKAL-EVIIEKANAAPIIVAYHFNSDLARLQK----------AFPQGRTLDKDPCTIQEW 104 + AL + E+ + +++ F + L L I ++ Sbjct: 224 LDALLAKLFER--GSRVLIFSQFVTMLQILADYLDWRGYNYCMLDGSSDFADRKEQIDDF 281 Query: 105 NEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFK 162 N K + + G G+NL + + ++F+ + ++ + Q +R + G K Sbjct: 282 NRPKSDRFVFLLSTRAGGLGINL-FTADTVIFYDMDYNPQMDYQAEDR-----AHRIGQK 335 Query: 163 RAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 V + +I + TIDE + K + + ++ Sbjct: 336 HQVHIIRMIVRGTIDESLHAITEQKKQLDESII 368 >gi|295661001|ref|XP_002791056.1| chromodomain-helicase-DNA-binding protein [Paracoccidioides brasiliensis Pb01] gi|226280983|gb|EEH36549.1| chromodomain-helicase-DNA-binding protein [Paracoccidioides brasiliensis Pb01] Length = 1481 Score = 93.5 bits (231), Expect = 2e-17, Method: Composition-based stats. Identities = 26/164 (15%), Positives = 63/164 (38%), Gaps = 20/164 (12%) Query: 52 HDEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQKAFPQGRTLDKD----------PC 99 K++ LE+++ K +++ F +L ++ L + Sbjct: 992 ASSKLQLLEMLVPKLQERGHRVLIFSQFLDNLDVIEDFLDGLGLLHRRLDGSMTSLQKQK 1051 Query: 100 TIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 I ++N P S G G+NL + ++ ++ + Q + R Sbjct: 1052 QIDDYNAPDSPYFAFLLSTRSGGVGINL-ATADTVIIMDPDFNPHQDIQALSR-----AH 1105 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 + G ++ V V+ L+ + + +E ++Q + K + +L+ + E Sbjct: 1106 RIGQQKKVLVFQLVTKASAEEKIMQIGKKKLALDQVLIEHMDAE 1149 >gi|168036988|ref|XP_001770987.1| SNF2 family DNA-dependent ATPase [Physcomitrella patens subsp. patens] gi|162677675|gb|EDQ64142.1| SNF2 family DNA-dependent ATPase [Physcomitrella patens subsp. patens] Length = 1385 Score = 93.5 bits (231), Expect = 2e-17, Method: Composition-based stats. Identities = 39/208 (18%), Positives = 71/208 (34%), Gaps = 36/208 (17%) Query: 1 MKQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKH-------WKEVHD 53 M + + G+ ++ + + L AV D+ + E Sbjct: 1168 MNTLQALPKVIVLVEDGKIVKGPKAETL------LKAEAVEIDQGETLSSGLPVVSETTV 1221 Query: 54 EKIKALEVIIEKANAAPIIVAYHFNSDLARL----QKAFPQGRTLDKD------PCTIQE 103 KI +E IV + S L L +K+ R LD + + Sbjct: 1222 SKIDKVEST------EKAIVFSQWTSMLDLLETPLKKSGLCYRRLDGTMSVVARDRAVSD 1275 Query: 104 WNE-GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFK 162 +N ++ ++ + GLN+ N ++ +WW+ Q I+R + G Sbjct: 1276 FNTLPEVTVMIMSLKAASLGLNM-VAANHVLLLDVWWNPTTEDQAIDR-----AHRIGQT 1329 Query: 163 RAVFVYYLIAQNTIDELVLQRLRTKSTI 190 R V V +NTI++ +L K I Sbjct: 1330 RTVNVSRFTIKNTIEDRILALQERKRQI 1357 >gi|299753600|ref|XP_002911886.1| Mot1 [Coprinopsis cinerea okayama7#130] gi|298410374|gb|EFI28392.1| Mot1 [Coprinopsis cinerea okayama7#130] Length = 1929 Score = 93.1 bits (230), Expect = 2e-17, Method: Composition-based stats. Identities = 38/199 (19%), Positives = 71/199 (35%), Gaps = 21/199 (10%) Query: 13 CDLQGENIEAFNSASKTVKCLQLANGA-VYYDEEKHWKEVHDEKIKALEVIIEKANAAPI 71 L +++ +A K + QL + E I A + + Sbjct: 1665 AKLTKDSLRDIQNAPKLLALKQLLMDCGIGSPPALAADSQKSELIDAPTDTSGTFSQHRV 1724 Query: 72 IVAYHFNSDLARLQ------------KAFPQGRT-LDKDPCTIQEWN-EGKIPLLFAHPA 117 ++ L ++ G T +K +Q +N + I L Sbjct: 1725 LIFCQMKQMLDIIETDLFKPHMPSVTYMRLDGSTDANKRHAIVQTFNSDPSIDCLLLTTH 1784 Query: 118 SCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 G GL L G + ++F W+ + Q ++R + G K+ V VY LI + T++ Sbjct: 1785 VGGLGLTLT-GADTVIFVEHDWNPMKDLQAMDR-----AHRIGQKKVVNVYRLITKGTLE 1838 Query: 178 ELVLQRLRTKSTIQDLLLN 196 E ++ R K I + ++N Sbjct: 1839 EKIMGLQRFKLNIANSIVN 1857 >gi|296220127|ref|XP_002756186.1| PREDICTED: DNA excision repair protein ERCC-6 [Callithrix jacchus] Length = 1490 Score = 93.1 bits (230), Expect = 2e-17, Method: Composition-based stats. Identities = 37/172 (21%), Positives = 64/172 (37%), Gaps = 21/172 (12%) Query: 43 DEEKHWKEVHDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQK----------AFPQ 90 D+ +WK K+ +E +++ +++ L L+ Sbjct: 828 DQFGYWKR--SGKMIVVESLLKIWHKQGQRVLLFSQSRQMLDILEVFLRAQKYTYLKMDG 885 Query: 91 GRTLDKDPCTIQEWNEGK-IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIE 149 T+ I +NE K I + G G+NL G N +V + W+ Q E Sbjct: 886 TTTIASRQPLITRYNEDKSIFVFLLTTRVGGLGVNLT-GANRVVIYDPDWNPSTDTQARE 944 Query: 150 RIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 R + G K+ V VY L+ TI+E + R K + + +L K+ Sbjct: 945 RAW-----RIGQKKQVTVYRLLTAGTIEEKIYHRQIFKQFLTNRVLKDPKQR 991 >gi|219121827|ref|XP_002181260.1| imitation switch isoform 1, alias nucleosome remodeling factor 140 kDa subunit [Phaeodactylum tricornutum CCAP 1055/1] gi|217407246|gb|EEC47183.1| imitation switch isoform 1, alias nucleosome remodeling factor 140 kDa subunit [Phaeodactylum tricornutum CCAP 1055/1] Length = 1023 Score = 93.1 bits (230), Expect = 2e-17, Method: Composition-based stats. Identities = 26/173 (15%), Positives = 67/173 (38%), Gaps = 22/173 (12%) Query: 38 GAVYYDEEKHWKEVHDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAFPQGRTL- 94 G Y D W+ + K++ + ++ +A + +++ L L+ F + Sbjct: 444 GPPYIDGPHLWE--NSGKMQLMHKLLPKLQAKGSRVLIFCQMTRVLDILEDYFRLTKLEY 501 Query: 95 ---------DKDPCTIQEWNE--GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEE 143 ++ + E+N + G G+NL +I++ + W+ + Sbjct: 502 CRIDGNTDGERRDSQMDEFNAEGSSKFAFLLSTRAGGLGINL-ATADIVILYDSDWNPQV 560 Query: 144 HQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 Q ++R + G + V V+ + + T++E +++R K + ++ Sbjct: 561 DLQAMDR-----AHRIGQTKPVQVFRFVTEGTVEEKIIERADRKLFLDAAVIQ 608 >gi|328777395|ref|XP_003249333.1| PREDICTED: TATA-binding protein-associated factor 172-like [Apis mellifera] Length = 1870 Score = 93.1 bits (230), Expect = 2e-17, Method: Composition-based stats. Identities = 25/142 (17%), Positives = 55/142 (38%), Gaps = 20/142 (14%) Query: 69 APIIVAYHFNSDLARLQK-------------AFPQGRTLDKDPCTIQEWN-EGKIPLLFA 114 ++ + L ++K + + +N + I +L Sbjct: 1657 HRALIFCQLKAMLDIVEKDLLRIHLPTVTYLRLDGSVPAAQRHSVVARFNADPSIDVLLL 1716 Query: 115 HPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQN 174 G GLNL G + ++F W+ + Q ++R + G K+ V VY LI ++ Sbjct: 1717 TTQVGGLGLNLT-GADTVIFVEHDWNPMKDLQAMDR-----AHRIGQKKVVNVYRLITRS 1770 Query: 175 TIDELVLQRLRTKSTIQDLLLN 196 T++E ++ + K + +++ Sbjct: 1771 TVEEKIMGLQKFKLLTANTVIS 1792 >gi|326478017|gb|EGE02027.1| SNF2 family helicase/ATPase [Trichophyton equinum CBS 127.97] Length = 1113 Score = 93.1 bits (230), Expect = 2e-17, Method: Composition-based stats. Identities = 42/231 (18%), Positives = 85/231 (36%), Gaps = 43/231 (18%) Query: 6 KFQRELYCDLQGENIEAFNSAS--------KTVKCLQLAN-------------GAVYYDE 44 + Q + Y + ++I+A N A +QL G Y + Sbjct: 428 EMQVKWYQKILEKDIDAVNGAQGNRESKTRLLNIVMQLRKCCNHPYLFEGAEPGPPYTTD 487 Query: 45 EKHWKEVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQ---------KAFPQGRT 93 E + K+ L+ ++ + + +++ + L L+ G T Sbjct: 488 EHLI--DNSGKMVILDKLLNRLFKQGSRVLIFSQMSRVLDILEDYCVFRGHEYCRIDGST 545 Query: 94 LDKDP-CTIQEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 +D I E+N K + + G G+NL +I++ F W+ + Q ++R Sbjct: 546 AHEDRIQAIDEYNRPGSKKFVFLLTTRAGGLGINLTT-ADIVILFDSDWNPQADLQAMDR 604 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 + G + V V+ I + I+E VL+R K + L++ + + Sbjct: 605 -----AHRIGQTKQVVVFRFITEKAIEEKVLERAAQKLRLDQLVIQQGRAQ 650 >gi|320590071|gb|EFX02516.1| chromatin remodeling complex subunit [Grosmannia clavigera kw1407] Length = 1931 Score = 93.1 bits (230), Expect = 2e-17, Method: Composition-based stats. Identities = 37/207 (17%), Positives = 75/207 (36%), Gaps = 34/207 (16%) Query: 23 FNSASKTVKCLQL----ANGAVYYD--EEKHWKEVH--------DEKIKALEVIIEK--A 66 +S +QL + +Y D EEK + K+ L +++ K A Sbjct: 1189 AERSSLNNILMQLRKCLCHPFIYNDAIEEKTVDQATMVQNLVEASSKLVLLRIMLPKLKA 1248 Query: 67 NAAPIIVAYHFNSDLARLQKAF-----PQGRTLDKDPCT-----IQEWNEGKIPLL--FA 114 +++ F L ++ P GR I +N PL Sbjct: 1249 RGRRVLLFSQFLHQLDIVEDFLTILGLPYGRLDGSMSSMEKQKRIDAFNAPDSPLFAFLL 1308 Query: 115 HPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQN 174 + G G+NL + ++ ++ + Q +R + G K V + L+ ++ Sbjct: 1309 STRAGGVGINL-ATADTVIVMDPDFNPHQDMQA-----FSRAHRIGQKNHVLCFQLVTKD 1362 Query: 175 TIDELVLQRLRTKSTIQDLLLNALKKE 201 +++E ++Q R K + L+ ++ E Sbjct: 1363 SVEEKIMQVGRKKMALDHALIESMDAE 1389 >gi|298710085|emb|CBJ31801.1| conserved unknown protein [Ectocarpus siliculosus] Length = 1032 Score = 93.1 bits (230), Expect = 2e-17, Method: Composition-based stats. Identities = 24/108 (22%), Positives = 50/108 (46%), Gaps = 8/108 (7%) Query: 96 KDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 + TI +N KI + + G G+ L G + ++ W+ + Q ++R Sbjct: 33 ERQHTIARFNANNKISVCLVSTGAGGTGITLT-GADRVILSDPSWNPADDMQAVDR---- 87 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA-LKKE 201 + G KR V VY +IA T++E + ++ K ++ ++ +K++ Sbjct: 88 -AYRIGQKRDVIVYRMIAAGTVEEKMYEKQIFKDGLRRTVMGGTVKRK 134 >gi|241954006|ref|XP_002419724.1| ATP-dependent helicase, putative [Candida dubliniensis CD36] gi|223643065|emb|CAX41939.1| ATP-dependent helicase, putative [Candida dubliniensis CD36] Length = 1102 Score = 93.1 bits (230), Expect = 2e-17, Method: Composition-based stats. Identities = 26/151 (17%), Positives = 60/151 (39%), Gaps = 16/151 (10%) Query: 56 IKALEVIIEKANAAPIIVAYHFNS--DLARLQK--------AFPQGRTLDKDPCTIQEWN 105 ++ + + K +IV F S DL L + ++D I+E+ Sbjct: 932 VEMILDLFSKNPGEKVIVFSQFTSLFDLMALVLQNQHIEFLRYDGTMSMDVKNNVIKEFY 991 Query: 106 EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 + +L + GL L ++++ +W+ +Q + R + G R V Sbjct: 992 QSNKNVLLLSLRAGNAGLTLTCANHVIIM-DPFWNPFVEEQAMGR-----AHRIGQTREV 1045 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 FV+ ++ T++ +++ +K + + L+ Sbjct: 1046 FVHRVLIAGTVENRIMELQESKKHLINSALD 1076 >gi|146423386|ref|XP_001487622.1| hypothetical protein PGUG_00999 [Meyerozyma guilliermondii ATCC 6260] Length = 542 Score = 93.1 bits (230), Expect = 2e-17, Method: Composition-based stats. Identities = 41/213 (19%), Positives = 77/213 (36%), Gaps = 35/213 (16%) Query: 2 KQYHK-----FQRELYCDLQG---------ENIEAFNSASKTVKCLQLANGAVYYDEEKH 47 K Y + +++ + + E++E + C++ + Y E+K Sbjct: 314 KLYDEEKLKQMAKDIMKEPEYVEANEQYIYEDMEVMSDYELNNLCVKFPTLSKYVLEDKE 373 Query: 48 WKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTL----------D 95 W ++ K+ L I++ A ++V F L L+K G D Sbjct: 374 W--LNSGKVGLLMDHIKEIMARKERVLVFSLFTQMLDILEKVLTIGNIKFLRLDGQTSVD 431 Query: 96 KDPCTIQEWNEGK-IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 I + + IP+ + G G+NL N+++F + +R Sbjct: 432 TRQDLIDTFYDDDTIPVFLLSTKAGGFGINLVAANNVVIFD------QSFNPHDDRQAED 485 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTK 187 R + G V V I++ TI+E +LQ K Sbjct: 486 RAHRVGQTSEVLVTRFISKGTIEENMLQLAENK 518 >gi|70993276|ref|XP_751485.1| SNF2 family helicase/ATPase [Aspergillus fumigatus Af293] gi|66849119|gb|EAL89447.1| SNF2 family helicase/ATPase, putative [Aspergillus fumigatus Af293] gi|159125581|gb|EDP50698.1| SNF2 family helicase/ATPase, putative [Aspergillus fumigatus A1163] Length = 1111 Score = 93.1 bits (230), Expect = 2e-17, Method: Composition-based stats. Identities = 41/231 (17%), Positives = 87/231 (37%), Gaps = 43/231 (18%) Query: 6 KFQRELYCDLQGENIEAFNSAS--------KTVKCLQLAN-------------GAVYYDE 44 + Q + Y + ++I+A N A+ +QL G Y + Sbjct: 425 EMQVKWYQKILEKDIDAVNGAAGKRESKTRLLNIVMQLRKCCNHPYLFEGAEPGPPYTTD 484 Query: 45 EKHWKEVHDEKIKALEVIIEKAN--AAPIIVAYHFNSDLARL---------QKAFPQGRT 93 E + K+ L+ ++ + + +++ + L L + G T Sbjct: 485 EHLV--YNSGKMVILDKLLARMQKQGSRVLIFSQMSRVLDILEDYCVFRDYKYCRIDGTT 542 Query: 94 LDKDP-CTIQEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 +D I E+N+ + + G G+NL +I+V + W+ + Q ++R Sbjct: 543 AHEDRIAAIDEYNKPGSDKFIFLLTTRAGGLGINLTT-ADIVVLYDSDWNPQADLQAMDR 601 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 + G + V V+ + +N I+E VL+R K + L++ + + Sbjct: 602 -----AHRIGQTKQVVVFRFVTENAIEEKVLERAAQKLRLDQLVIQQGRAQ 647 >gi|169617355|ref|XP_001802092.1| hypothetical protein SNOG_11855 [Phaeosphaeria nodorum SN15] gi|160703388|gb|EAT80899.2| hypothetical protein SNOG_11855 [Phaeosphaeria nodorum SN15] Length = 1950 Score = 93.1 bits (230), Expect = 2e-17, Method: Composition-based stats. Identities = 30/150 (20%), Positives = 61/150 (40%), Gaps = 20/150 (13%) Query: 61 VIIEKANAAPIIVAYHFNSDLAR-----LQKAFPQGRTLD--------KDPCTIQEWN-E 106 + E + ++ L LQK P + + K + ++N + Sbjct: 1715 DLPEAVSQHRALIFCQMKEMLDMVQNTVLQKMLPSVQFMRLDGTVEATKRQEIVNKFNSD 1774 Query: 107 GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVF 166 +L + G GLNL G + ++F W+ ++ Q ++R + G K+ V Sbjct: 1775 PSYDVLLLTTSVGGLGLNLT-GADTVIFVEHDWNPQKDIQAMDR-----AHRIGQKKVVN 1828 Query: 167 VYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 VY ++ + T++E +L R K + ++N Sbjct: 1829 VYRIVTRGTLEEKILSLQRFKIDVASTVVN 1858 >gi|226290256|gb|EEH45740.1| chromodomain helicase hrp3 [Paracoccidioides brasiliensis Pb18] Length = 1521 Score = 93.1 bits (230), Expect = 2e-17, Method: Composition-based stats. Identities = 32/164 (19%), Positives = 61/164 (37%), Gaps = 20/164 (12%) Query: 38 GAVYYDEEKHWKEVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQKAFPQG---- 91 G +E K+ L+ ++ K + +++ L L Sbjct: 759 GKTGREEMMRAIITSSGKMMLLDQLLAKLRKDGHRVLIFSQMVRMLDILADYMDVRGYAY 818 Query: 92 RTLDKD------PCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEE 143 + LD +I+ +N + G G+NL + +V F W+ + Sbjct: 819 QRLDGTIAAGPRRLSIEHFNAPDSNDFAFLLSTRAGGLGINLMT-ADTVVLFDSDWNPQA 877 Query: 144 HQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTK 187 Q + R + G + V VY L++++T++E VL+R R K Sbjct: 878 DLQAMAR-----AHRIGQTKPVSVYRLVSKDTVEEEVLERARNK 916 >gi|71033369|ref|XP_766326.1| DNA repair protein Rad54 [Theileria parva strain Muguga] gi|68353283|gb|EAN34043.1| DNA repair protein rad54, putative [Theileria parva] Length = 786 Score = 93.1 bits (230), Expect = 2e-17, Method: Composition-based stats. Identities = 28/145 (19%), Positives = 56/145 (38%), Gaps = 18/145 (12%) Query: 63 IEKANAAPIIVAYHFNSDL---ARLQK-------AFPQGRTLDKDPCTIQEWNEGKIP-- 110 I + +++ ++ L RL K ++ K + +N+ Sbjct: 481 IRRHGNDRVVIISNYTQTLDLFERLCKECNYPFERLDGTTSIKKRHKLVTTFNDPNSNSF 540 Query: 111 LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYL 170 + + G G+NL G N LV F W+ +Q + R+ + G + ++Y Sbjct: 541 IFLLSSKAGGCGINL-IGANRLVLFDPDWNPANDKQALARVW-----RDGQTKVCYIYRF 594 Query: 171 IAQNTIDELVLQRLRTKSTIQDLLL 195 + TI+E + QR K + +L+ Sbjct: 595 FSTGTIEEKIYQRQICKDGLSSMLV 619 >gi|326481938|gb|EGE05948.1| dsDNA-dependent ATPase [Trichophyton equinum CBS 127.97] Length = 1004 Score = 93.1 bits (230), Expect = 2e-17, Method: Composition-based stats. Identities = 27/104 (25%), Positives = 46/104 (44%), Gaps = 9/104 (8%) Query: 96 KDPCTIQEWN---EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIG 152 K ++++N + G GLNL G + LV F + W+ Q + RI Sbjct: 645 KRQALVEDFNRSPSSSCFAFLLSAKAGGTGLNL-IGASRLVLFDVDWNPATDIQAMARI- 702 Query: 153 VTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + G KR +Y L+ + I+E + QR TK + D +++ Sbjct: 703 ----HRDGQKRHCHIYRLLLKGGIEEKIWQRQVTKLGLADSVMD 742 >gi|326473366|gb|EGD97375.1| dsDNA-dependent ATPase [Trichophyton tonsurans CBS 112818] Length = 922 Score = 93.1 bits (230), Expect = 2e-17, Method: Composition-based stats. Identities = 27/104 (25%), Positives = 46/104 (44%), Gaps = 9/104 (8%) Query: 96 KDPCTIQEWN---EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIG 152 K ++++N + G GLNL G + LV F + W+ Q + RI Sbjct: 645 KRQALVEDFNRSPSSSCFAFLLSAKAGGTGLNL-IGASRLVLFDVDWNPATDIQAMARI- 702 Query: 153 VTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + G KR +Y L+ + I+E + QR TK + D +++ Sbjct: 703 ----HRDGQKRHCHIYRLLLKGGIEEKIWQRQVTKLGLADSVMD 742 >gi|302499754|ref|XP_003011872.1| hypothetical protein ARB_01851 [Arthroderma benhamiae CBS 112371] gi|291175426|gb|EFE31232.1| hypothetical protein ARB_01851 [Arthroderma benhamiae CBS 112371] Length = 921 Score = 93.1 bits (230), Expect = 2e-17, Method: Composition-based stats. Identities = 27/104 (25%), Positives = 46/104 (44%), Gaps = 9/104 (8%) Query: 96 KDPCTIQEWN---EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIG 152 K ++++N + G GLNL G + LV F + W+ Q + RI Sbjct: 645 KRQALVEDFNRSPSSSCFAFLLSAKAGGTGLNL-IGASRLVLFDVDWNPATDIQAMARI- 702 Query: 153 VTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + G KR +Y L+ + I+E + QR TK + D +++ Sbjct: 703 ----HRDGQKRHCHIYRLLLKGGIEEKIWQRQVTKLGLADSVMD 742 >gi|225682812|gb|EEH21096.1| chromodomain helicase hrp1 [Paracoccidioides brasiliensis Pb03] Length = 1521 Score = 93.1 bits (230), Expect = 2e-17, Method: Composition-based stats. Identities = 32/164 (19%), Positives = 61/164 (37%), Gaps = 20/164 (12%) Query: 38 GAVYYDEEKHWKEVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQKAFPQG---- 91 G +E K+ L+ ++ K + +++ L L Sbjct: 759 GKTGREEMMRAIITSSGKMMLLDQLLAKLRKDGHRVLIFSQMVRMLDILADYMDVRGYAY 818 Query: 92 RTLDKD------PCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEE 143 + LD +I+ +N + G G+NL + +V F W+ + Sbjct: 819 QRLDGTIAAGPRRLSIEHFNAPDSNDFAFLLSTRAGGLGINLMT-ADTVVLFDSDWNPQA 877 Query: 144 HQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTK 187 Q + R + G + V VY L++++T++E VL+R R K Sbjct: 878 DLQAMAR-----AHRIGQTKPVSVYRLVSKDTVEEEVLERARNK 916 >gi|151941201|gb|EDN59579.1| hypothetical protein SCY_3612 [Saccharomyces cerevisiae YJM789] Length = 722 Score = 93.1 bits (230), Expect = 2e-17, Method: Composition-based stats. Identities = 30/159 (18%), Positives = 62/159 (38%), Gaps = 23/159 (14%) Query: 53 DEKIKALEVIIEKANAAPIIVAYHFNSDLARLQK--------------AFPQGRTLDKDP 98 +K L+++ + + +++ F++ L L+K F +L + Sbjct: 550 TALLKELQLLQDSSAGEQVVIFSQFSTYLDILEKELTHTFSKDVAKIYKFDGRLSLKERT 609 Query: 99 CTIQEWNEGK---IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTR 155 + ++ +L + G GLNL + + WW Q I+R+ Sbjct: 610 SVLADFAVKDYSRQKILLLSLKAGGVGLNLTCASHAYMM-DPWWSPSMEDQAIDRL---- 664 Query: 156 QRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 + G +V V I Q++I+E +L+ K TI + + Sbjct: 665 -HRIGQTNSVKVMRFIIQDSIEEKMLRIQEKKRTIGEAM 702 >gi|189197581|ref|XP_001935128.1| helicase swr1 [Pyrenophora tritici-repentis Pt-1C-BFP] gi|187981076|gb|EDU47702.1| helicase swr1 [Pyrenophora tritici-repentis Pt-1C-BFP] Length = 1676 Score = 93.1 bits (230), Expect = 2e-17, Method: Composition-based stats. Identities = 29/166 (17%), Positives = 67/166 (40%), Gaps = 19/166 (11%) Query: 44 EEKHWKEVHDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAF---------PQGR 92 +K + K++ L ++ +A ++ L L++ G Sbjct: 1359 PDKRLLQYDCGKLQRLATLLRDLQAGGHRALIFTQMTKVLDILEQFLNIHGYRYLRLDGS 1418 Query: 93 TLDKDPCTI-QEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 T + + +N + +I S G G+NL G + ++F+ L W+ +++ Sbjct: 1419 TKIEQRQILTDRFNTDPRILCFILSSRSGGLGINLT-GADSVIFYDLDWN-----PAMDK 1472 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 R + G R V +Y +++ TI+ +L++ K + D+++ Sbjct: 1473 QCQDRAHRIGQTRDVHIYKFVSEYTIEANILRKSNQKRLLDDVIIQ 1518 >gi|15898473|ref|NP_343078.1| hypothetical protein SSO1655 [Sulfolobus solfataricus P2] gi|13814902|gb|AAK41868.1| Helicase of the snf2/rad54 family (carboxy end fragment), hypothetical [Sulfolobus solfataricus P2] Length = 124 Score = 93.1 bits (230), Expect = 2e-17, Method: Composition-based stats. Identities = 22/96 (22%), Positives = 44/96 (45%), Gaps = 6/96 (6%) Query: 102 QEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGF 161 + N + + + G G+NL N ++ F WW+ Q +R+ + G Sbjct: 11 KFQNNPSVKFIVLSVKAGGFGINLT-SANRVIHFDRWWNPAVEDQATDRV-----YRIGQ 64 Query: 162 KRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 R V V+ LI+ T++E + Q L K ++ ++++ Sbjct: 65 TRNVIVHKLISVGTLEEKIDQLLAFKRSLFKDIISS 100 >gi|261197521|ref|XP_002625163.1| TBP associated factor [Ajellomyces dermatitidis SLH14081] gi|239595793|gb|EEQ78374.1| TBP associated factor [Ajellomyces dermatitidis SLH14081] gi|239606789|gb|EEQ83776.1| TBP associated factor [Ajellomyces dermatitidis ER-3] Length = 1902 Score = 93.1 bits (230), Expect = 2e-17, Method: Composition-based stats. Identities = 37/209 (17%), Positives = 71/209 (33%), Gaps = 30/209 (14%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEV 61 K+Y + Q+ + +I A K L D + ++ Sbjct: 1624 KRYDEIQKS--LAGKNSHIRDVAHAPKLTALRDL-----LVDCGIGVDPSTEGELDTGAS 1676 Query: 62 IIEKANAAPIIVAYHFNSDLARLQK-------------AFPQGRTLDKDPCTIQEWN-EG 107 + +V L +Q K + ++N + Sbjct: 1677 YVSP---HRALVFCQMKEMLDIVQNDVLKKLLPSVQYLRLDGSVEATKRQNIVNQFNTDP 1733 Query: 108 KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFV 167 +L + G GLNL G + ++F W+ ++ Q ++R + G K+ V V Sbjct: 1734 SYDVLLLTTSVGGLGLNLT-GADTVIFVEHDWNPQKDIQAMDR-----AHRIGQKKVVNV 1787 Query: 168 YYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 Y LI + T++E +L R K + ++N Sbjct: 1788 YRLITRGTLEEKILNLQRFKIDVASTVVN 1816 >gi|327295002|ref|XP_003232196.1| dsDNA-dependent ATPase [Trichophyton rubrum CBS 118892] gi|326465368|gb|EGD90821.1| dsDNA-dependent ATPase [Trichophyton rubrum CBS 118892] Length = 923 Score = 93.1 bits (230), Expect = 2e-17, Method: Composition-based stats. Identities = 26/104 (25%), Positives = 46/104 (44%), Gaps = 9/104 (8%) Query: 96 KDPCTIQEWN---EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIG 152 + ++++N + G GLNL G + LV F + W+ Q + RI Sbjct: 646 RRQALVEDFNRSPSSSCFAFLLSAKAGGTGLNL-IGASRLVLFDVDWNPATDIQAMARI- 703 Query: 153 VTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + G KR +Y L+ + I+E + QR TK + D +++ Sbjct: 704 ----HRDGQKRHCHIYRLLLKGGIEEKIWQRQVTKLGLADSVMD 743 >gi|302653548|ref|XP_003018598.1| hypothetical protein TRV_07389 [Trichophyton verrucosum HKI 0517] gi|291182255|gb|EFE37953.1| hypothetical protein TRV_07389 [Trichophyton verrucosum HKI 0517] Length = 1104 Score = 93.1 bits (230), Expect = 2e-17, Method: Composition-based stats. Identities = 41/231 (17%), Positives = 85/231 (36%), Gaps = 43/231 (18%) Query: 6 KFQRELYCDLQGENIEAFNSAS--------KTVKCLQLAN-------------GAVYYDE 44 + Q + Y + ++I+A N A +QL G Y + Sbjct: 419 EMQVKWYQKILEKDIDAVNGAQGNRESKTRLLNVVMQLRKCCNHPYLFEGAEPGPPYTTD 478 Query: 45 EKHWKEVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQ---------KAFPQGRT 93 E + K+ L+ ++ + + +++ + L L+ G T Sbjct: 479 EHLI--DNSGKMVILDKLLNRLFKQGSRVLIFSQMSRVLDILEDYCVFRGHEYCRIDGST 536 Query: 94 LDKDP-CTIQEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 +D I E+N + + + G G+NL +I++ F W+ + Q ++R Sbjct: 537 AHEDRIQAIDEYNRPGSEKFVFLLTTRAGGLGINLTT-ADIVILFDSDWNPQADLQAMDR 595 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 + G + V V+ I + I+E VL+R K + L++ + + Sbjct: 596 -----AHRIGQTKQVVVFRFITEKAIEEKVLERAAQKLRLDQLVIQQGRAQ 641 >gi|66812364|ref|XP_640361.1| SNF2-related domain-containing protein [Dictyostelium discoideum AX4] gi|60468377|gb|EAL66383.1| SNF2-related domain-containing protein [Dictyostelium discoideum AX4] Length = 1640 Score = 93.1 bits (230), Expect = 2e-17, Method: Composition-based stats. Identities = 35/172 (20%), Positives = 61/172 (35%), Gaps = 28/172 (16%) Query: 47 HWKEVHDEKIKALE-----VII--EKANAAPIIVAYHFNSDLARLQKAFPQG-------- 91 + K+K L +I E ++ + S L ++++ Q Sbjct: 1447 KIDSLFSTKVKTLLGDIQNDLIDNEDNADEKCLIVSQWTSMLDLIEESLKQNHWVKNTHY 1506 Query: 92 -------RTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEH 144 KD Q + + ++ S G GLNL N + WW+ Sbjct: 1507 VRYDGRCSHQQKDKAIKQLNEDDDVRVMLVSLKSGGVGLNLTR-ANRVYMVDPWWNEASE 1565 Query: 145 QQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 Q R+ + G R VFV I N+I+ +L+ +K+ I + LL+ Sbjct: 1566 VQAEGRV-----HRIGQTREVFVKRYIMNNSIEIRILELQESKNEIANALLS 1612 >gi|301122241|ref|XP_002908847.1| DNA repair and recombination protein RAD54 [Phytophthora infestans T30-4] gi|262099609|gb|EEY57661.1| DNA repair and recombination protein RAD54 [Phytophthora infestans T30-4] Length = 1076 Score = 93.1 bits (230), Expect = 2e-17, Method: Composition-based stats. Identities = 34/151 (22%), Positives = 61/151 (40%), Gaps = 18/151 (11%) Query: 56 IKALEVIIEKANAAPIIVAYHFNSDLARL-----QKAFPQGRT-----LDKDPCTIQEWN 105 + L + K I++ ++ L + ++ P R K + +N Sbjct: 552 LDRLMFSMRKTTTDRIVIVSNYTQTLDVVSTLCQERHLPFVRLDGTTSAKKRKKLVDTFN 611 Query: 106 EGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKR 163 E L + G GLNL G N LV F W+ +Q R+ + G K+ Sbjct: 612 EPTTNSFALLLSSKAGGCGLNL-IGANRLVLFDPDWNPATDKQAAARVW-----REGQKK 665 Query: 164 AVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 +VY +A T++E + QR +K +Q+++ Sbjct: 666 MCYVYRFLATGTLEEKIFQRQLSKEGLQNIV 696 >gi|221120739|ref|XP_002163131.1| PREDICTED: similar to predicted protein [Hydra magnipapillata] Length = 1024 Score = 93.1 bits (230), Expect = 2e-17, Method: Composition-based stats. Identities = 43/229 (18%), Positives = 84/229 (36%), Gaps = 40/229 (17%) Query: 2 KQY---HKFQRELYCDLQGENIEAFNSASKTVK------CLQL---ANGAVYYD--EEKH 47 K Y QR+ Y L ++I+ N A K + +QL N +D E Sbjct: 378 KIYVGLSVMQRQWYTKLLMKDIDIVNGAGKVDRMRLLNILMQLRKCCNHPYLFDGAEPGP 437 Query: 48 WKEVHDEKIK------ALEVIIEKAN--AAPIIVAYHFNSDLARL---------QKAFPQ 90 + L+++++K + +++ L L Q Sbjct: 438 PYTTDQHLVDNCGKMIVLDMLLKKLKDSGSRVLIFSQMTRVLDILEDYAMWRGYQYCRLD 497 Query: 91 GRTLDK-DPCTIQEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQM 147 G+T + I E+N L + G G+NL ++++ + W+ + Q Sbjct: 498 GQTPHELRTAQINEFNAPGSDKFLFMLSTRAGGLGINL-ATADVVIMYDNDWNPQVDLQA 556 Query: 148 IERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 R + G + V V+ I +NTI+E +++R K + +++ Sbjct: 557 -----QDRAHRIGQTKQVHVFKFITENTIEERIIERAEIKLRLDAVVIQ 600 >gi|325088122|gb|EGC41432.1| chromatin remodelling complex ATPase chain ISW1 [Ajellomyces capsulatus H88] Length = 1112 Score = 93.1 bits (230), Expect = 2e-17, Method: Composition-based stats. Identities = 44/239 (18%), Positives = 88/239 (36%), Gaps = 46/239 (19%) Query: 1 MKQY---HKFQRELYCDLQGENIEAFNSAS--------KTVKCLQLAN------------ 37 M Y Q + Y + ++I+A N A +QL Sbjct: 408 MNLYVGMSDMQVKWYQKILEKDIDAVNGAQGKRESKTRLLNIVMQLRKCCNHPYLFEGAE 467 Query: 38 -GAVYYDEEKHWKEVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARL---------Q 85 G Y +E + K+ L+ I+++ + +++ + L L Q Sbjct: 468 PGPPYTTDEHLI--DNAGKMVILDKILKRMKNQGSRVLIFSQMSRVLDILEDYCVFREHQ 525 Query: 86 KAFPQGRTLDKDP-CTIQEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLE 142 G T +D I E+N + + + G G+NL +I++ + W+ + Sbjct: 526 YCRIDGSTAHEDRIAAIDEYNRPGSEKFIFLLTTRAGGLGINLT-SADIVILYDSDWNPQ 584 Query: 143 EHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 Q ++R + G + V V+ + +N I+E VL+R K + L++ + + Sbjct: 585 ADLQAMDR-----AHRIGQTKQVVVFRFVTENAIEEKVLERAAQKLRLDQLVIQQGRAQ 638 >gi|123477045|ref|XP_001321692.1| SNF2 family N-terminal domain containing protein [Trichomonas vaginalis G3] gi|121904523|gb|EAY09469.1| SNF2 family N-terminal domain containing protein [Trichomonas vaginalis G3] Length = 1425 Score = 93.1 bits (230), Expect = 2e-17, Method: Composition-based stats. Identities = 24/146 (16%), Positives = 54/146 (36%), Gaps = 17/146 (11%) Query: 65 KANAAPIIVAYHFNSDLARLQ----------KAFPQGRTLDKDPCTIQEW-NEGKIPLLF 113 KA+ +++ L L+ + + I+ + N+ + Sbjct: 586 KADGHKVLIFSQMVKVLDILEDYIAIKGYKCERIDGSVAENDRQAAIERFGNDPDAFIFL 645 Query: 114 AHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQ 173 + G G+NL + ++ + W+ + Q R + G + V VY L+ + Sbjct: 646 LCTKAGGVGINLT-AADTVIIYDSDWNPQNDIQAQSRC-----HRIGQTQKVKVYRLVTR 699 Query: 174 NTIDELVLQRLRTKSTIQDLLLNALK 199 T + +L R K + LL++++ Sbjct: 700 GTYELDMLDRASKKLGLDHALLDSVE 725 >gi|323508354|emb|CBQ68225.1| related to RAD5-DNA helicase [Sporisorium reilianum] Length = 1377 Score = 93.1 bits (230), Expect = 2e-17, Method: Composition-based stats. Identities = 29/167 (17%), Positives = 54/167 (32%), Gaps = 20/167 (11%) Query: 38 GAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARL-----QKAFPQGR 92 +Y + L + ++ F S L + + F R Sbjct: 1188 STIYVRNNVRSSTKVTALLDHLNALRAAEGPFKGVIFSQFTSFLDLIEPVLTRYRFRFLR 1247 Query: 93 TLDKDPCTIQE-----WNEG----KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEE 143 P ++E + + L + G GLNL N + WW+ Sbjct: 1248 LDGSTPQKVREKLLVEFQSASSATETLLFLISLKAGGVGLNLT-AANKIWLLDFWWNSSI 1306 Query: 144 HQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 Q I+RI + G R V V+ + +++I+ +L + K + Sbjct: 1307 ENQAIDRI-----HRLGQTRPVSVFRYLVKDSIENRILLIQKRKDML 1348 >gi|297491621|ref|XP_002698997.1| PREDICTED: excision repair cross-complementing rodent repair deficiency, complementation group 6-like [Bos taurus] gi|296472015|gb|DAA14130.1| excision repair cross-complementing rodent repair deficiency, complementation group 6-like [Bos taurus] Length = 1006 Score = 93.1 bits (230), Expect = 2e-17, Method: Composition-based stats. Identities = 34/172 (19%), Positives = 62/172 (36%), Gaps = 21/172 (12%) Query: 43 DEEKHWKEVHDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQK----------AFPQ 90 D+ +WK K+ +E +++ +++ L L+ Sbjct: 298 DQFGYWKR--SGKMIVVESLLKIWHKQGQRVLLFSQSRQMLDILEVFLRAQKYSYLKMDG 355 Query: 91 GRTLDKDPCTIQEWNEG-KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIE 149 + I +NE I + G G+NL G N ++ + W+ Q E Sbjct: 356 TTAIASRQPLITRYNEDTSIFVFLLTTRVGGLGVNLT-GANRVIIYDPDWNPSTDTQARE 414 Query: 150 RIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 R + G K+ V VY L+ TI+E + R K + + +L K+ Sbjct: 415 RAW-----RIGQKKQVTVYRLLTAGTIEEKIYHRQIFKQFLTNRVLKDPKQR 461 >gi|224099763|ref|XP_002311608.1| chromatin remodeling complex subunit [Populus trichocarpa] gi|222851428|gb|EEE88975.1| chromatin remodeling complex subunit [Populus trichocarpa] Length = 1131 Score = 93.1 bits (230), Expect = 2e-17, Method: Composition-based stats. Identities = 38/216 (17%), Positives = 92/216 (42%), Gaps = 26/216 (12%) Query: 2 KQYHKFQREL-YCDLQGENIEAFNSASKTVKCLQLANGA-VYYDEEKHWKEV----HDEK 55 K Y++ E+ LQ + ++ + + T++ + N ++ + W++ K Sbjct: 669 KVYYQQVTEMGRVGLQNGSGKSKSLQNLTMQLRKCCNHPYLFVGDYNMWRKDEIMRASGK 728 Query: 56 IKALEVIIEKAN--AAPIIVAYHFNSDLARL---------QKAFPQGRTL-DKDPCTIQE 103 + L+ ++ K + +++ + L + G T ++ +++ Sbjct: 729 FELLDRLLPKLHATDHRVLLFSQMTRLMDILEIYLQLHDYKYLRLDGSTKTEERGTLLKK 788 Query: 104 WNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGF 161 +N P + + G GLNLQ + ++ F W+ + QQ +R + G Sbjct: 789 FNAPDSPYFMFLLSTRAGGLGLNLQT-ADTVIIFDSDWNPQMDQQAEDR-----AHRIGQ 842 Query: 162 KRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 K+ V V+ L++ +++E++L+R + K I ++ A Sbjct: 843 KKEVRVFVLVSVGSVEEVILERAKQKKGIDAKVIQA 878 >gi|209882027|ref|XP_002142451.1| SNF2/RAD54 helicase family protein [Cryptosporidium muris RN66] gi|209558057|gb|EEA08102.1| SNF2/RAD54 helicase family protein [Cryptosporidium muris RN66] Length = 1877 Score = 93.1 bits (230), Expect = 2e-17, Method: Composition-based stats. Identities = 28/143 (19%), Positives = 48/143 (33%), Gaps = 18/143 (12%) Query: 65 KANAAPIIVAYHFNSDLARLQKAFP---------QGRTLDKD-PCTIQEWNEGKIP--LL 112 KA ++V F L L++ G D I +N + + Sbjct: 1371 KAEGHKVLVFSQFIQTLTLLEELVEHHKWGYERLDGSIRGSDRSAAITRFNADESDKFIF 1430 Query: 113 FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIA 172 + G G+NL + ++ F W+ + Q R + G R V VY LI Sbjct: 1431 LLSTRAGGLGINLT-SADTVIIFDSDWNPQNDVQACAR-----AHRIGQTRDVKVYRLIT 1484 Query: 173 QNTIDELVLQRLRTKSTIQDLLL 195 T + + +R K + + Sbjct: 1485 ARTYEAEMFERASRKLGLNTAVF 1507 >gi|124487019|ref|NP_001074690.1| DNA excision repair protein ERCC-6 [Mus musculus] gi|189442813|gb|AAI67234.1| Excision repair cross-complementing rodent repair deficiency, complementation group 6 [synthetic construct] Length = 1481 Score = 93.1 bits (230), Expect = 2e-17, Method: Composition-based stats. Identities = 34/169 (20%), Positives = 62/169 (36%), Gaps = 21/169 (12%) Query: 46 KHWKEVHDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQK----------AFPQGRT 93 HW+ K+ +E +++ +++ L L+ T Sbjct: 829 GHWRR--SGKMIVVESLLKIWHRQGQRVLLFSQSRQMLHILEVFLRAHKYSYLKMDGTTT 886 Query: 94 LDKDPCTIQEWNEG-KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIG 152 + I ++NE I + G G+NL G N ++ + W+ Q ER Sbjct: 887 IASRQPLITKYNEDTSIFVFLLTTRVGGLGVNLT-GANRVIIYDPDWNPSTDTQARERAW 945 Query: 153 VTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 + G K+ V VY L+ TI+E + R K + + +L K+ Sbjct: 946 -----RIGQKKQVTVYRLLTAGTIEEKIYHRQIFKQFLTNRVLKDPKQR 989 >gi|297192312|ref|ZP_06909710.1| conserved hypothetical protein [Streptomyces pristinaespiralis ATCC 25486] gi|197719707|gb|EDY63615.1| conserved hypothetical protein [Streptomyces pristinaespiralis ATCC 25486] Length = 775 Score = 93.1 bits (230), Expect = 2e-17, Method: Composition-based stats. Identities = 43/191 (22%), Positives = 81/191 (42%), Gaps = 24/191 (12%) Query: 14 DLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIE--KANAAPI 71 + + EA+ A + + + A Y EK K++ L +++ AN + Sbjct: 484 EFSAADAEAYREAVASGNFMAMRRAA-YARPEK------SAKLERLRELVDDAAANGLKV 536 Query: 72 IVAYHFNSDLARLQKAFPQGR--------TLDKDPCTIQEWNE-GKIPLLFAHPASCGHG 122 +V +F LA + +A +G + + E+ +L A + G G Sbjct: 537 VVFSYFRDVLAAVGEALDEGVFGPVSGSVPAARRQQLVDEFTAAPGHAVLLAQIEAGGVG 596 Query: 123 LNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQ 182 LNLQ ++++ + + +E V R + G RAV V+ L+A N++D+ +L Sbjct: 597 LNLQ-AASVVIICEP-----QVKPTMEHQAVARAHRMGQVRAVQVHRLLATNSVDQRMLD 650 Query: 183 RLRTKSTIQDL 193 L +KS + D Sbjct: 651 ILESKSRLFDA 661 >gi|145602035|ref|XP_359538.2| hypothetical protein MGG_05239 [Magnaporthe oryzae 70-15] gi|145010485|gb|EDJ95141.1| hypothetical protein MGG_05239 [Magnaporthe oryzae 70-15] Length = 1163 Score = 93.1 bits (230), Expect = 2e-17, Method: Composition-based stats. Identities = 33/157 (21%), Positives = 60/157 (38%), Gaps = 20/157 (12%) Query: 53 DEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAFPQ----------GRTLDKDPCT 100 K++ ++ +++ K ++ L L+ + G+T KD Sbjct: 698 SGKMQVVKALLQMWKKFGHKTLLFSQGTQMLDILEDFVRKQDDITYLRMDGKTAIKDRQA 757 Query: 101 I--QEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQ 158 + Q N I L G G NL G + ++ + W+ Q ER + Sbjct: 758 MVDQFNNSPGIDLFLLTTKVGGLGTNLT-GADRVIIYDPDWNPSTDVQARERAW-----R 811 Query: 159 AGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 G K+ V +Y L+ TI+E + QR K + + +L Sbjct: 812 LGQKKEVTIYRLMTAGTIEEKIYQRQIFKQFLTNKVL 848 >gi|198430685|ref|XP_002130660.1| PREDICTED: hypothetical protein [Ciona intestinalis] Length = 1867 Score = 93.1 bits (230), Expect = 2e-17, Method: Composition-based stats. Identities = 26/146 (17%), Positives = 53/146 (36%), Gaps = 18/146 (12%) Query: 65 KANAAPIIVAYHFNSDLARLQKAFPQGRTL----------DKDPCTIQEWN-EGKIPL-L 112 K N +++ L +Q+ R D + +N EG Sbjct: 824 KENGHRVLIFSQMVRMLDIIQEYLVVRRLQFQRLDGSVSSDLRRRALDHFNAEGSEDFCF 883 Query: 113 FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIA 172 + G G+NL + ++ F W+ Q R + G K V +Y L+ Sbjct: 884 LLSTRAGGLGINL-ATADTVIIFDSDWNPMNDLQAQAR-----AHRIGQKNQVNIYRLVC 937 Query: 173 QNTIDELVLQRLRTKSTIQDLLLNAL 198 +++E +++R + K + L++ + Sbjct: 938 AGSVEEDIIERAKKKMVLDHLVIQRM 963 >gi|316972508|gb|EFV56185.1| domain protein, SNF2 family [Trichinella spiralis] Length = 1052 Score = 93.1 bits (230), Expect = 2e-17, Method: Composition-based stats. Identities = 26/109 (23%), Positives = 50/109 (45%), Gaps = 8/109 (7%) Query: 95 DKDPCTIQEWN--EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIG 152 ++ + ++N + ++ + G GLNL GGN L L W+ + Q +RI Sbjct: 913 EERGERMAKFNRIDSDPEVMLLSLTAGGVGLNLT-GGNHLFLMDLHWNPAQELQASDRIN 971 Query: 153 VTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 + G R V +Y + TI+E VL+ K + + +L+ + ++ Sbjct: 972 -----RIGQTRDVVIYKTVCSGTIEEKVLKLQEEKLALAESVLSGVARQ 1015 >gi|67901102|ref|XP_680807.1| hypothetical protein AN7538.2 [Aspergillus nidulans FGSC A4] gi|40742928|gb|EAA62118.1| hypothetical protein AN7538.2 [Aspergillus nidulans FGSC A4] gi|259483857|tpe|CBF79592.1| TPA: ATP-dependent DNA helicase (Eurofung) [Aspergillus nidulans FGSC A4] Length = 1132 Score = 93.1 bits (230), Expect = 2e-17, Method: Composition-based stats. Identities = 31/171 (18%), Positives = 65/171 (38%), Gaps = 19/171 (11%) Query: 40 VYYDEEKHWKEV-HDEKIKALEVIIE-KANAAPIIVAYHFNSDLARLQKAFPQG------ 91 +Y + +V KI+ L I+ +A IV F S L +++ + Sbjct: 885 IYLNPGDDENQVLPSTKIRQLMKILRREAPDFKFIVFSVFTSMLDKIEPFLSRAGIGYAR 944 Query: 92 -----RTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 R ++ + N +L + GLNL + +V +W+ +Q Sbjct: 945 YDGSMRNDLREASLEKLRNHRGTRVLLCSLRAGALGLNLT-AASRVVILEPFWNPFVEEQ 1003 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 I+R+ + V +Y +I ++T++E +L K + ++ + Sbjct: 1004 AIDRV-----HRLNQTVDVKIYKMIIKDTVEERILDLQERKRELANVTIEG 1049 >gi|195054315|ref|XP_001994071.1| GH17632 [Drosophila grimshawi] gi|193895941|gb|EDV94807.1| GH17632 [Drosophila grimshawi] Length = 1050 Score = 93.1 bits (230), Expect = 2e-17, Method: Composition-based stats. Identities = 31/161 (19%), Positives = 64/161 (39%), Gaps = 21/161 (13%) Query: 52 HDEKIKALEVIIEKA---NAAPIIVAYHFNSDLARLQKAFPQGRT----------LDKDP 98 K+ + I++ + +I+ + S L L+ Q + + Sbjct: 879 PSTKMLKVLEILKTNILKSDDKVIIVSQWTSMLDILRDLLQQEKLAALSLNGSIPVKNRQ 938 Query: 99 CTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 + E+N+ + +L + G GLNL G N L+ L W+ + Q +RI Sbjct: 939 NIVNEFNDARNSKRILLLSLTAGGVGLNL-IGANHLILLDLHWNPQLEAQAQDRI----- 992 Query: 157 RQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + G K+ VF+Y ++ T+++ + K + + +L Sbjct: 993 YRVGQKKDVFIYKIVCLETVEQRIKALQDRKMALAEGVLTG 1033 >gi|327281442|ref|XP_003225457.1| PREDICTED: DNA excision repair protein ERCC-6-like [Anolis carolinensis] Length = 1441 Score = 93.1 bits (230), Expect = 2e-17, Method: Composition-based stats. Identities = 28/146 (19%), Positives = 51/146 (34%), Gaps = 17/146 (11%) Query: 67 NAAPIIVAYHFNSDLARLQKAFPQGR----------TLDKDPCTIQEWNEG-KIPLLFAH 115 +++ L ++ Q T+ I +NE I + Sbjct: 834 QGHRVLLFTQSRQMLHIIEAFLKQRSYSYVKMDGTTTVASRQPLISRFNEDTSIFIFLLT 893 Query: 116 PASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNT 175 G G+NL G + ++ + W+ Q ER + G + V VY L+ T Sbjct: 894 TRVGGLGVNLT-GADRVIIYDPDWNPSTDTQARERAW-----RIGQTKEVTVYRLLTAGT 947 Query: 176 IDELVLQRLRTKSTIQDLLLNALKKE 201 I+E + R K + + +L K+ Sbjct: 948 IEEKIYHRQIFKQFLTNRILKDPKQR 973 >gi|322707220|gb|EFY98799.1| chromatin-remodeling complex ATPase chain isw-1 [Metarhizium anisopliae ARSEF 23] Length = 1679 Score = 93.1 bits (230), Expect = 2e-17, Method: Composition-based stats. Identities = 33/156 (21%), Positives = 62/156 (39%), Gaps = 18/156 (11%) Query: 53 DEKIKALEVIIEKANAAP--IIVAYHFNSDLARLQKAFPQGR----------TLDKDPCT 100 K++ L I++ A + ++V H L L F + + + K Sbjct: 1163 STKVELLIQILDDAKRSKDKVLVFSHSIPTLNYLSGLFQEQKRLFSRLDGKTPIAKRQEE 1222 Query: 101 IQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 I+++N + + G GLN+Q G N +V W+ QQ I R + G Sbjct: 1223 IKKFNANHTEVYLISTRAGGVGLNIQ-GANKVVILDSKWNPVHEQQAIGR-----SYRIG 1276 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + V VYY + T ++ + R K+ + +++ Sbjct: 1277 QSKPVSVYYFVTAGTFEQDLHGRAIFKTQLATRVVD 1312 >gi|134115669|ref|XP_773548.1| hypothetical protein CNBI1620 [Cryptococcus neoformans var. neoformans B-3501A] gi|50256174|gb|EAL18901.1| hypothetical protein CNBI1620 [Cryptococcus neoformans var. neoformans B-3501A] Length = 899 Score = 93.1 bits (230), Expect = 2e-17, Method: Composition-based stats. Identities = 40/180 (22%), Positives = 66/180 (36%), Gaps = 25/180 (13%) Query: 30 VKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEK-ANAAPIIVAYHFNSDLA----RL 84 L+L + Y + ++ KI L + +V F S L RL Sbjct: 695 GSILRLPSDESLYLPSSQARSINSAKIDELVKYLRIFPRDDKTLVFSQFTSFLDCVGVRL 754 Query: 85 QKAFPQGRTLD------KDPCTIQEWNEG-------KIP-LLFAHPASCGHGLNLQYGGN 130 ++ + D + I+ + E + P ++ S GLNL N Sbjct: 755 EQEGVKFVRFDGRMPGKQRTEVIKAFQEPVKGDDDEEAPTVMLISLKSGAVGLNLTAASN 814 Query: 131 ILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 + WW Q IE + R + G K+ V V+ LIA++TI+ VL + K + Sbjct: 815 -VFLCDPWW-----QSAIEAQAIDRAHRMGQKKVVRVFQLIAEDTIESRVLDIQKRKDAM 868 >gi|322694287|gb|EFY86121.1| ISWI chromatin-remodeling complex ATPase ISW2 [Metarhizium acridum CQMa 102] Length = 870 Score = 93.1 bits (230), Expect = 2e-17, Method: Composition-based stats. Identities = 25/140 (17%), Positives = 52/140 (37%), Gaps = 18/140 (12%) Query: 68 AAPIIVAYHFNSDLARLQK-----------AFPQGRTLDKDPCTIQEWNEG-KIPLLFAH 115 +++ F + L L+ D I ++N L Sbjct: 649 GHKVLLFSQFKTQLDILEDYSRELRGWNVCRIDGSVPQDSRRQQIHDFNNDADYNLFLLS 708 Query: 116 PASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNT 175 + G G+NL + ++ F ++ ++ Q +R + G R V VY L ++T Sbjct: 709 TRAGGQGINL-ASADTVILFDSDFNPQQDLQAQDRC-----HRIGQTRPVIVYRLATKDT 762 Query: 176 IDELVLQRLRTKSTIQDLLL 195 ++E +L K ++ L++ Sbjct: 763 VEESLLMSADAKRRLEKLVI 782 >gi|225682466|gb|EEH20750.1| chromodomain-helicase-DNA-binding protein [Paracoccidioides brasiliensis Pb03] Length = 1605 Score = 93.1 bits (230), Expect = 2e-17, Method: Composition-based stats. Identities = 26/164 (15%), Positives = 63/164 (38%), Gaps = 20/164 (12%) Query: 52 HDEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQKAFPQGRTLDKD----------PC 99 K++ LE+++ K +++ F +L ++ L + Sbjct: 998 ASSKLQLLEMLVPKLQERGHRVLIFSQFLDNLDVIEDFLDGLGLLHRRLDGSMTSLQKQK 1057 Query: 100 TIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 I ++N P S G G+NL + ++ ++ + Q + R Sbjct: 1058 QIDDYNAPDSPYFAFLLSTRSGGVGINL-ATADTVIIMDPDFNPHQDIQALSR-----AH 1111 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 + G ++ V V+ L+ + + +E ++Q + K + +L+ + E Sbjct: 1112 RIGQQKKVLVFQLVTKASAEEKIMQIGKKKLALDQVLIEHMDAE 1155 >gi|225557819|gb|EEH06104.1| SNF2-family ATP dependent chromatin remodeling factor snf21 [Ajellomyces capsulatus G186AR] Length = 1423 Score = 93.1 bits (230), Expect = 2e-17, Method: Composition-based stats. Identities = 39/225 (17%), Positives = 82/225 (36%), Gaps = 33/225 (14%) Query: 2 KQYHKF---QRELYCDLQGENIEAFNSASKTVKCLQLANGA----VYYDEEKHWKEVHD- 53 K Y + + + D +G ++ ++ +L N DE + +D Sbjct: 782 KLYKQLATHNKLIVSDGKGGKTGVRGLSNMLMQLRKLCNHPFVFESVEDEMNPGRATNDL 841 Query: 54 -----EKIKALEVIIE--KANAAPIIVAYHFNSD---------LARLQKAFPQGRTLDKD 97 K + L+ I+ +A+ +++ + L ++ G T D Sbjct: 842 IWRTAGKFELLDRILPKFQASGHRVLMFFQMTQIMNIMEDFLRLRGMKYLRLDGSTKSDD 901 Query: 98 PCTI-QEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 + +E+N + G GLNLQ + ++ + W+ + Q Sbjct: 902 RSDLLKEFNAPGSDYFCFLLSTRAGGLGLNLQT-ADTVIIYDSDWNPHQDLQA-----QD 955 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 R + G K V + LI N+++E +L+ + K + ++ A K Sbjct: 956 RAHRIGQKNEVRILRLITSNSVEERILEAAQFKLDMDGKVIQAGK 1000 >gi|155371796|ref|YP_001427330.1| hypothetical protein ATCV1_Z849R [Acanthocystis turfacea Chlorella virus 1] gi|155125116|gb|ABT16983.1| hypothetical protein ATCV1_Z849R [Acanthocystis turfacea Chlorella virus 1] Length = 456 Score = 93.1 bits (230), Expect = 2e-17, Method: Composition-based stats. Identities = 38/194 (19%), Positives = 67/194 (34%), Gaps = 20/194 (10%) Query: 17 GENIEAFNSASKTVKCLQLA---NGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIV 73 G++ ++ Q N YYD+ + E K+K +E I + I+ Sbjct: 243 GDSQARMEVLKIILRLRQCTGNINMVPYYDDPDTFYEGESTKLKMMEEDILNSPMQKTII 302 Query: 74 AYHFNSDLARLQKAFP-----------QGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHG 122 HF+ ++ + + + N+ + L + G G Sbjct: 303 FTHFHKEMDYIAAMLKSHGFASVRLDGRVSAKGRISSVESFNNDPECNFLLVQIDAGGVG 362 Query: 123 LNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQ 182 LNLQ I + S+ W+ Q I R + G V V LI +T+D+ ++ Sbjct: 363 LNLQVAKRIYI-TSVHWNGTAEIQAIAR-----SYRIGQDSQVTVKRLIINDTVDDAIVG 416 Query: 183 RLRTKSTIQDLLLN 196 + K LL Sbjct: 417 IQQQKLECAAELLE 430 >gi|115534248|ref|NP_499654.3| yeast Swi2/Snf2-Like family member (ssl-1) [Caenorhabditis elegans] gi|122064843|sp|Q9NEL2|SSL1_CAEEL RecName: Full=Helicase ssl-1; AltName: Full=Swi/snf2-like protein 1 gi|45451721|gb|AAS65429.1| Swi/Snf family ATPase [Caenorhabditis elegans] gi|95101929|emb|CAC35851.3| C. elegans protein Y111B2A.22a, confirmed by transcript evidence [Caenorhabditis elegans] Length = 2395 Score = 93.1 bits (230), Expect = 2e-17, Method: Composition-based stats. Identities = 24/104 (23%), Positives = 51/104 (49%), Gaps = 7/104 (6%) Query: 94 LDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIG 152 +++ ++ +N + K+ S G G+NL G + ++F+ W+ Q +R Sbjct: 1240 VEQRQAMMERFNADPKVFCFILSTRSGGVGVNLT-GADTVIFYDSDWNPTMDAQAQDRC- 1297 Query: 153 VTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + G R V +Y LI++ TI+E +L++ K + +L ++ Sbjct: 1298 ----HRIGQTRNVSIYRLISERTIEENILRKATQKRRLGELAID 1337 >gi|19115158|ref|NP_594246.1| ATP-dependent DNA helicase (predicted) [Schizosaccharomyces pombe 972h-] gi|74675924|sp|O13762|YF2C_SCHPO RecName: Full=Uncharacterized ATP-dependent helicase C17A2.12 gi|2414584|emb|CAB16565.1| ATP-dependent DNA helicase (predicted) [Schizosaccharomyces pombe] Length = 897 Score = 93.1 bits (230), Expect = 2e-17, Method: Composition-based stats. Identities = 27/148 (18%), Positives = 57/148 (38%), Gaps = 17/148 (11%) Query: 61 VIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTL----------DKDPCTIQEWNEGK-I 109 II I+V F+ L + ++ ++ +N K + Sbjct: 734 DIIGSKRNEKILVYSQFSQYLCLVSHMLKLENIRHVRYDGTMSANQRQKSLHSFNNDKDV 793 Query: 110 PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYY 169 ++ + GLNL N ++ +++ Q I+R+ + G ++ V VY Sbjct: 794 LVMLVSLKAGSVGLNLTI-ANHVILQEPFYNPSIEDQAIDRV-----HRLGQQKPVTVYR 847 Query: 170 LIAQNTIDELVLQRLRTKSTIQDLLLNA 197 I ++TI+E ++ R K + L++ Sbjct: 848 FITKDTIEERIVSVQRKKRQLVKEALDS 875 >gi|58261298|ref|XP_568059.1| SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 3 [Cryptococcus neoformans var. neoformans JEC21] gi|57230141|gb|AAW46542.1| SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 3, putative [Cryptococcus neoformans var. neoformans JEC21] Length = 900 Score = 93.1 bits (230), Expect = 2e-17, Method: Composition-based stats. Identities = 40/180 (22%), Positives = 66/180 (36%), Gaps = 25/180 (13%) Query: 30 VKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEK-ANAAPIIVAYHFNSDLA----RL 84 L+L + Y + ++ KI L + +V F S L RL Sbjct: 696 GSILRLPSDESLYLPSSQARSINSAKIDELVKYLRIFPRDDKTLVFSQFTSFLDCVGVRL 755 Query: 85 QKAFPQGRTLD------KDPCTIQEWNEG-------KIP-LLFAHPASCGHGLNLQYGGN 130 ++ + D + I+ + E + P ++ S GLNL N Sbjct: 756 EQEGVKFVRFDGRMPGKQRTEVIKAFQEPVKGDDDEEAPTVMLISLKSGAVGLNLTAASN 815 Query: 131 ILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 + WW Q IE + R + G K+ V V+ LIA++TI+ VL + K + Sbjct: 816 -VFLCDPWW-----QSAIEAQAIDRAHRMGQKKVVRVFQLIAEDTIESRVLDIQKRKDAM 869 >gi|328352490|emb|CCA38889.1| chromodomain-helicase-DNA-binding protein 1 [Pichia pastoris CBS 7435] Length = 1387 Score = 93.1 bits (230), Expect = 2e-17, Method: Composition-based stats. Identities = 26/159 (16%), Positives = 60/159 (37%), Gaps = 20/159 (12%) Query: 52 HDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARL----------QKAFPQGRTLDKDPC 99 K+ L+ ++ + + +++ L L + + Sbjct: 665 SSGKMVLLDKLLTRLKKDGHRVLIFSQMVRMLDILGDYLTFKGYSFQRLDGTVPSARRRV 724 Query: 100 TIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 I +N + + G G+NL + ++ F W+ + Q + R Sbjct: 725 AIDHFNADGSQDFVFLLSTRAGGLGINLMT-ADTVIIFDSDWNPQADLQAMAR-----AH 778 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + G K V VY ++++T++E VL+R R K ++ +++ Sbjct: 779 RIGQKNHVMVYRFVSKDTVEEEVLERARKKMILEYAIIS 817 >gi|254567734|ref|XP_002490977.1| Nucleosome remodeling factor that functions in regulation of transcription elongation [Pichia pastoris GS115] gi|238030774|emb|CAY68697.1| Nucleosome remodeling factor that functions in regulation of transcription elongation [Pichia pastoris GS115] Length = 1387 Score = 93.1 bits (230), Expect = 2e-17, Method: Composition-based stats. Identities = 26/159 (16%), Positives = 60/159 (37%), Gaps = 20/159 (12%) Query: 52 HDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARL----------QKAFPQGRTLDKDPC 99 K+ L+ ++ + + +++ L L + + Sbjct: 665 SSGKMVLLDKLLTRLKKDGHRVLIFSQMVRMLDILGDYLTFKGYSFQRLDGTVPSARRRV 724 Query: 100 TIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 I +N + + G G+NL + ++ F W+ + Q + R Sbjct: 725 AIDHFNADGSQDFVFLLSTRAGGLGINLMT-ADTVIIFDSDWNPQADLQAMAR-----AH 778 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + G K V VY ++++T++E VL+R R K ++ +++ Sbjct: 779 RIGQKNHVMVYRFVSKDTVEEEVLERARKKMILEYAIIS 817 >gi|300121090|emb|CBK21472.2| unnamed protein product [Blastocystis hominis] Length = 1183 Score = 93.1 bits (230), Expect = 2e-17, Method: Composition-based stats. Identities = 25/142 (17%), Positives = 52/142 (36%), Gaps = 18/142 (12%) Query: 66 ANAAPIIVAYHFNSDLARLQKAF---------PQGRTL-DKDPCTIQEWNEGKIPLL--F 113 A +++ F + L L++ G + I+ +N+ + Sbjct: 498 AEGHRVLIFSQFTTMLDILERYLRLAGLSYTRIDGSVRGNAREEAIRTFNDENSNMFCFL 557 Query: 114 AHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQ 173 + G G+ L + ++ F W+ + Q R + G +AV VY LI + Sbjct: 558 LSTRAGGVGITLTT-ADTVIIFDSDWNPQNDVQAQARC-----HRIGQTKAVRVYRLITR 611 Query: 174 NTIDELVLQRLRTKSTIQDLLL 195 T + + QR K ++ ++ Sbjct: 612 GTYEAAMFQRASLKLGLEQAVM 633 >gi|224133490|ref|XP_002328055.1| chromatin remodeling complex subunit [Populus trichocarpa] gi|222837464|gb|EEE75843.1| chromatin remodeling complex subunit [Populus trichocarpa] Length = 843 Score = 93.1 bits (230), Expect = 2e-17, Method: Composition-based stats. Identities = 36/198 (18%), Positives = 72/198 (36%), Gaps = 20/198 (10%) Query: 14 DLQGENIEAFNSASKTVKCLQLANGAVYYDEE-KHWKEVHDEKIKALEVIIEK--ANAAP 70 + + +A +++ + L G + H K++ALE ++ + Sbjct: 474 EPDKQKKDAEFASAVFGADVDLVGGNAQSENFMGLSDVKHCGKMQALEKLMFSWASRGDK 533 Query: 71 IIVAYHFNSDLARLQK----------AFPQGRTLDKDPCTIQEWNE-GKIPLLFAHPASC 119 I++ + L L+K + + ++N + + Sbjct: 534 ILLFSYSVRMLDILEKFLIRKGHSFSRLDGSTPTNLRQSLVDDFNSSPSKQVFLISTRAG 593 Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 G GLNL N +V F W+ + Q R + G KR V V+ L+A + +EL Sbjct: 594 GLGLNL-VSANRVVIFDPNWNPAQDLQA-----QDRSFRFGQKRHVVVFRLLAAGSFEEL 647 Query: 180 VLQRLRTKSTIQDLLLNA 197 V R K + ++ ++ Sbjct: 648 VYSRQVYKQQLSNIAVSG 665 >gi|71988744|ref|NP_499301.2| hypothetical protein M03C11.8 [Caenorhabditis elegans] gi|31043816|emb|CAA88960.2| C. elegans protein M03C11.8, partially confirmed by transcript evidence [Caenorhabditis elegans] gi|31043823|emb|CAA15960.2| C. elegans protein M03C11.8, partially confirmed by transcript evidence [Caenorhabditis elegans] Length = 989 Score = 93.1 bits (230), Expect = 2e-17, Method: Composition-based stats. Identities = 25/155 (16%), Positives = 60/155 (38%), Gaps = 19/155 (12%) Query: 58 ALEVIIEKANAAPIIVAYHFNSDLARLQ----------KAFPQGRTLDKDPCTIQEWN-E 106 L I + +++ F S L L+ K + I E+N Sbjct: 761 MLPEI--QKKGDKVLIFSQFTSMLDILEVYLNIRGYSYKRLDGQTPVLDRQEMINEFNLS 818 Query: 107 GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVF 166 + + + G G+NL +I++ + ++ +Q +R + G ++ V Sbjct: 819 KDLFVFLLSTRAGGLGINLTSANHIIIH-DIDFNPYNDKQAEDRC-----HRMGQEKPVH 872 Query: 167 VYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 V L+++ T++ +L + K ++ + + +K + Sbjct: 873 VTRLVSKGTVEVGMLALAKKKLQLEKQVTDGVKGQ 907 >gi|38567839|emb|CAE05788.2| OSJNBb0020J19.17 [Oryza sativa Japonica Group] Length = 1634 Score = 93.1 bits (230), Expect = 2e-17, Method: Composition-based stats. Identities = 26/162 (16%), Positives = 57/162 (35%), Gaps = 19/162 (11%) Query: 42 YDEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAF----------P 89 D E + K+ + +++ + +++ L +Q+A Sbjct: 581 DDVELQVGQDVSCKLSFMMSLLQNLVSEGHNVLIFSQTRKMLNIIQEAIILEGYKFLRID 640 Query: 90 QGRTLDKDPCTIQEWNEG-KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMI 148 + + ++++ EG P+ G GL L ++V W+ Q + Sbjct: 641 GTTKISERERIVKDFQEGPGAPIFLLTTQVGGLGLTLTKAARVIV-VDPAWNPSTDNQSV 699 Query: 149 ERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 +R + G + V VY L+ TI+E + + K + Sbjct: 700 DR-----AYRIGQMKDVIVYRLMTSGTIEEKIYKLQVFKGAL 736 Score = 85.8 bits (211), Expect = 3e-15, Method: Composition-based stats. Identities = 27/166 (16%), Positives = 59/166 (35%), Gaps = 23/166 (13%) Query: 40 VYYDEEKHWKEVHDEK----IKALEVIIEKANAAPIIVAYHFNSDLARLQKA-------- 87 +Y D+ + K + L ++E+ +++ L +Q A Sbjct: 1242 LYADKRLQIVQGASCKIAFILPLLRNLVEE--GHYVLIFSQTRVMLNLIQDAVSIEGHKF 1299 Query: 88 --FPQGRTLDKDPCTIQEWNEG-KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEH 144 + + ++++ EG P+L G G L + ++ W+ Sbjct: 1300 LRIDGTTKISERKKILKDFQEGLDSPILLLTSHVGGLGNTLTK-ADRVIVVDPAWNPSID 1358 Query: 145 QQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 Q ++R + G + V VY L+ TI+E + ++ K + Sbjct: 1359 NQSVDR-----AYRIGQTKDVIVYRLVTCGTIEEKIYKQQIFKGGL 1399 >gi|315054985|ref|XP_003176867.1| ISWI chromatin-remodeling complex ATPase ISW2 [Arthroderma gypseum CBS 118893] gi|311338713|gb|EFQ97915.1| ISWI chromatin-remodeling complex ATPase ISW2 [Arthroderma gypseum CBS 118893] Length = 1114 Score = 93.1 bits (230), Expect = 2e-17, Method: Composition-based stats. Identities = 41/231 (17%), Positives = 85/231 (36%), Gaps = 43/231 (18%) Query: 6 KFQRELYCDLQGENIEAFNSAS--------KTVKCLQLAN-------------GAVYYDE 44 + Q + Y + ++I+A N A +QL G Y + Sbjct: 428 EMQVKWYQKILEKDIDAVNGAQGNRESKTRLLNIVMQLRKCCNHPYLFEGAEPGPPYTTD 487 Query: 45 EKHWKEVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQ---------KAFPQGRT 93 E + K+ L+ ++ + + +++ + L L+ G T Sbjct: 488 EHLI--DNSGKMVILDKLLTRLFKQGSRVLIFSQMSRVLDILEDYCVFRGHEYCRIDGST 545 Query: 94 LDKDP-CTIQEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 +D I E+N + + + G G+NL +I++ F W+ + Q ++R Sbjct: 546 AHEDRIQAIDEYNRPGSEKFVFLLTTRAGGLGINLTT-ADIVILFDSDWNPQADLQAMDR 604 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 + G + V V+ I + I+E VL+R K + L++ + + Sbjct: 605 -----AHRIGQTKQVVVFRFITEKAIEEKVLERAAQKLRLDQLVIQQGRAQ 650 >gi|260584382|ref|ZP_05852129.1| SNF2 family DNA/RNA helicase [Granulicatella elegans ATCC 700633] gi|260157900|gb|EEW92969.1| SNF2 family DNA/RNA helicase [Granulicatella elegans ATCC 700633] Length = 790 Score = 93.1 bits (230), Expect = 2e-17, Method: Composition-based stats. Identities = 46/191 (24%), Positives = 80/191 (41%), Gaps = 29/191 (15%) Query: 14 DLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKA--NAAPI 71 ++ EAF+ +K ++A + EKIK + I ++A N + Sbjct: 573 QIELYESEAFSEKCSVMKLRRMA-----------FLGEDSEKIKQIIDICKEARENGMKV 621 Query: 72 IVAYHFNSD-LARLQKAFPQGRT--------LDKDPCTIQEWNEGKIP-LLFAHPASCGH 121 +V F +D L RL++ P + + I E+++ +L A + G Sbjct: 622 LVFSFFKTDVLYRLRELVPNTASDILSGDISPARRQEVIDEFSKDSNQTVLLAQIEAGGV 681 Query: 122 GLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVL 181 GLN+Q NI++ W QQ I R+ + G R V VY L+ +++IDE ++ Sbjct: 682 GLNIQ-SANIVILCEPQWKPSTEQQAISRV-----YRMGQTRDVLVYRLLTKDSIDEPIM 735 Query: 182 QRLRTKSTIQD 192 + K D Sbjct: 736 ALIHKKEVEFD 746 >gi|225682464|gb|EEH20748.1| SNF2 family ATP-dependent chromatin-remodeling factor snf21 [Paracoccidioides brasiliensis Pb03] Length = 1120 Score = 93.1 bits (230), Expect = 2e-17, Method: Composition-based stats. Identities = 44/239 (18%), Positives = 88/239 (36%), Gaps = 46/239 (19%) Query: 1 MKQY---HKFQRELYCDLQGENIEAFNSAS--------KTVKCLQLAN------------ 37 M Y Q + Y + ++I+A N A +QL Sbjct: 418 MNLYVGMSDMQVKWYQKILEKDIDAVNGAQGKRESKTRLLNIVMQLRKCCNHPYLFEGAE 477 Query: 38 -GAVYYDEEKHWKEVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARL---------Q 85 G Y +E + K+ L+ I+++ + +++ + L L Q Sbjct: 478 PGPPYTTDEHLI--DNAGKMVILDKILKRMKNQGSRVLIFSQMSRVLDILEDYCVFREHQ 535 Query: 86 KAFPQGRTLDKDP-CTIQEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLE 142 G T +D I E+N + + + G G+NL +I++ + W+ + Sbjct: 536 YCRIDGSTAHEDRIAAIDEYNRPGSEKFIFLLTTRAGGLGINLT-SADIVILYDSDWNPQ 594 Query: 143 EHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 Q ++R + G + V V+ + +N I+E VL+R K + L++ + + Sbjct: 595 ADLQAMDR-----AHRIGQTKQVVVFRFVTENAIEEKVLKRAAQKLRLDQLVIQQGRAQ 648 >gi|5917753|gb|AAD56021.1|AF181824_1 chromodomain helicase DNA binding protein 1 [Aegolius funereus] Length = 918 Score = 93.1 bits (230), Expect = 2e-17, Method: Composition-based stats. Identities = 29/153 (18%), Positives = 57/153 (37%), Gaps = 21/153 (13%) Query: 68 AAPIIVAYHFNSDLARLQKAFPQG----RTLDK------DPCTIQEWN-EGKIPL-LFAH 115 +++ L L + R LD + +N EG Sbjct: 426 GNRVLIFSQMVRMLDILAEYLKYRQFPFRRLDGSIKGELRKQALDHFNAEGSEDFCFLLS 485 Query: 116 PASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNT 175 + G G+NL + +V F W+ + Q R + G K+ V +Y L+ + + Sbjct: 486 TRAGGLGINL-ASADTVVIFDSDWNPQNDLQAQAR-----AHRIGQKKQVNIYRLVTKGS 539 Query: 176 IDELVLQRLRTKSTIQDLL---LNALKKETIHV 205 ++E +L+R + K + L+ ++ K +H Sbjct: 540 VEEDILERAKKKMVLDHLVIQRMDTTGKTVLHT 572 >gi|115389796|ref|XP_001212403.1| conserved hypothetical protein [Aspergillus terreus NIH2624] gi|114194799|gb|EAU36499.1| conserved hypothetical protein [Aspergillus terreus NIH2624] Length = 1503 Score = 93.1 bits (230), Expect = 2e-17, Method: Composition-based stats. Identities = 27/158 (17%), Positives = 62/158 (39%), Gaps = 20/158 (12%) Query: 55 KIKALEVIIEKAN--AAPIIVAYHFNSDLARLQKAFPQGRTLDKD----------PCTIQ 102 K+K LE+++ K + +++ F +L ++ + I Sbjct: 912 KLKLLELMLPKLHQRGNRVLIFSQFLDNLNIIEDFLDGLGLRHRRLDGRMTSLEKQKMID 971 Query: 103 EWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 E+N P S G G+NL + ++ ++ + Q + R + G Sbjct: 972 EYNAEDSPYFAFLLSTRSGGVGINL-ATADTVIIMDPDFNPHQDMQALSR-----AHRIG 1025 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNAL 198 K V V+ L+ + + +E ++Q + K + +L++ + Sbjct: 1026 QKNKVLVFQLMTRGSAEEKIMQIGKKKMVLDHVLIDRM 1063 >gi|115438260|ref|XP_001218021.1| SNF2-family ATP dependent chromatin remodeling factor snf21 [Aspergillus terreus NIH2624] gi|114188836|gb|EAU30536.1| SNF2-family ATP dependent chromatin remodeling factor snf21 [Aspergillus terreus NIH2624] Length = 1418 Score = 93.1 bits (230), Expect = 2e-17, Method: Composition-based stats. Identities = 33/159 (20%), Positives = 62/159 (38%), Gaps = 20/159 (12%) Query: 55 KIKALEVIIE--KANAAPIIVAYHFNSD---------LARLQKAFPQGRTLDKDPCTI-Q 102 K + L+ I+ +A +++ + L L+ G T D + + Sbjct: 862 KFELLDRILPKFRATGHRVLMFFQMTQIMNIMEDFLRLRGLKYLRLDGSTKSDDRSDLLK 921 Query: 103 EWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 +N + + G GLNLQ + ++ F W+ + Q R + G Sbjct: 922 LFNAPGSEYFCFLLSTRAGGLGLNLQ-SADTVIIFDSDWNPHQDLQA-----QDRAHRIG 975 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 K V + LI N+I+E +L+R + K + ++ A K Sbjct: 976 QKNEVRILRLITSNSIEEKILERAQFKLDMDGKVIQAGK 1014 >gi|326531768|dbj|BAJ97888.1| predicted protein [Hordeum vulgare subsp. vulgare] Length = 1270 Score = 93.1 bits (230), Expect = 2e-17, Method: Composition-based stats. Identities = 25/133 (18%), Positives = 50/133 (37%), Gaps = 17/133 (12%) Query: 69 APIIVAYHFNSDLA----RLQKAFPQGRTLDKD------PCTIQEWNE-GKIPLLFAHPA 117 IV + L LQ + R LD + ++ ++ ++ Sbjct: 1116 EKAIVFSQWTRMLDLLEVHLQASHVTYRRLDGTMSVAAREKAVNDFKTVPEVSVMIMSLK 1175 Query: 118 SCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 + GLN+ ++L+ LWW+ Q ++R + G R V V L ++T++ Sbjct: 1176 AASLGLNMVAACHVLML-DLWWNPTTEDQAVDR-----AHRIGQTRPVTVSRLTVKDTVE 1229 Query: 178 ELVLQRLRTKSTI 190 + +L K + Sbjct: 1230 DRILALQEKKREM 1242 >gi|326426853|gb|EGD72423.1| transcription activator [Salpingoeca sp. ATCC 50818] Length = 1106 Score = 93.1 bits (230), Expect = 2e-17, Method: Composition-based stats. Identities = 39/230 (16%), Positives = 86/230 (37%), Gaps = 40/230 (17%) Query: 1 MKQY---HKFQRELYCDLQGENIEAFNSASKTVK------CLQL---ANGAVYYD----- 43 +K Y K QR+ Y ++ ++I+ N A + K +QL N +D Sbjct: 464 IKVYVGMSKMQRDWYKNILMKDIDTINGAGRVEKMRLLNILMQLRKCCNHPYLFDGAEPG 523 Query: 44 ---EEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARL---------QKAFP 89 + K+ L+ ++ K A + +++ L L + Sbjct: 524 PPFTTDQHLVDNSGKLVVLDKLLTKLKAQGSRVLIFSQMTRMLDILEDYSWWRGHKYCRL 583 Query: 90 QGRTLDK-DPCTIQEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 G T + I ++N + + G G+NL Y ++++ + ++ + Q Sbjct: 584 DGSTAHEIRGEMIDDFNRPNSDKFMFLLSTRAGGLGINL-YTADVVIIYDSDFNPQMDLQ 642 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 R + G + V V+ I + T++E +++R K + +++ Sbjct: 643 A-----QDRAHRIGQTKEVRVFRFITEKTVEERIVERAEMKLRLDAVVIQ 687 >gi|322708300|gb|EFY99877.1| ISWI chromatin-remodeling complex ATPase ISW2 [Metarhizium anisopliae ARSEF 23] Length = 869 Score = 93.1 bits (230), Expect = 2e-17, Method: Composition-based stats. Identities = 25/140 (17%), Positives = 52/140 (37%), Gaps = 18/140 (12%) Query: 68 AAPIIVAYHFNSDLARLQK-----------AFPQGRTLDKDPCTIQEWNEG-KIPLLFAH 115 +++ F + L L+ D I ++N L Sbjct: 648 GHKVLLFSQFKTQLDILEDYSRELRGWNVCRIDGSVPQDSRRQQIHDFNNDADYNLFLLS 707 Query: 116 PASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNT 175 + G G+NL + ++ F ++ ++ Q +R + G R V VY L ++T Sbjct: 708 TRAGGQGINL-ASADTVILFDSDFNPQQDLQAQDRC-----HRIGQTRPVIVYRLATKDT 761 Query: 176 IDELVLQRLRTKSTIQDLLL 195 ++E +L K ++ L++ Sbjct: 762 VEESLLMSADAKRRLEKLVI 781 >gi|222629845|gb|EEE61977.1| hypothetical protein OsJ_16754 [Oryza sativa Japonica Group] Length = 1678 Score = 93.1 bits (230), Expect = 2e-17, Method: Composition-based stats. Identities = 26/162 (16%), Positives = 57/162 (35%), Gaps = 19/162 (11%) Query: 42 YDEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAF----------P 89 D E + K+ + +++ + +++ L +Q+A Sbjct: 626 DDVELQVGQDVSCKLSFMMSLLQNLVSEGHNVLIFSQTRKMLNIIQEAIILEGYKFLRID 685 Query: 90 QGRTLDKDPCTIQEWNEG-KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMI 148 + + ++++ EG P+ G GL L ++V W+ Q + Sbjct: 686 GTTKISERERIVKDFQEGPGAPIFLLTTQVGGLGLTLTKAARVIV-VDPAWNPSTDNQSV 744 Query: 149 ERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 +R + G + V VY L+ TI+E + + K + Sbjct: 745 DR-----AYRIGQMKDVIVYRLMTSGTIEEKIYKLQVFKGAL 781 Score = 85.8 bits (211), Expect = 3e-15, Method: Composition-based stats. Identities = 27/166 (16%), Positives = 59/166 (35%), Gaps = 23/166 (13%) Query: 40 VYYDEEKHWKEVHDEK----IKALEVIIEKANAAPIIVAYHFNSDLARLQKA-------- 87 +Y D+ + K + L ++E+ +++ L +Q A Sbjct: 1286 LYADKRLQIVQGASCKIAFILPLLRNLVEE--GHYVLIFSQTRVMLNLIQDAVSIEGHKF 1343 Query: 88 --FPQGRTLDKDPCTIQEWNEG-KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEH 144 + + ++++ EG P+L G G L + ++ W+ Sbjct: 1344 LRIDGTTKISERKKILKDFQEGLDSPILLLTSHVGGLGNTLTK-ADRVIVVDPAWNPSID 1402 Query: 145 QQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 Q ++R + G + V VY L+ TI+E + ++ K + Sbjct: 1403 NQSVDR-----AYRIGQTKDVIVYRLVTCGTIEEKIYKQQIFKGGL 1443 >gi|306419502|emb|CBW48565.1| C. elegans protein Y111B2A.22d, confirmed by transcript evidence [Caenorhabditis elegans] Length = 2249 Score = 93.1 bits (230), Expect = 2e-17, Method: Composition-based stats. Identities = 24/104 (23%), Positives = 51/104 (49%), Gaps = 7/104 (6%) Query: 94 LDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIG 152 +++ ++ +N + K+ S G G+NL G + ++F+ W+ Q +R Sbjct: 1094 VEQRQAMMERFNADPKVFCFILSTRSGGVGVNLT-GADTVIFYDSDWNPTMDAQAQDRC- 1151 Query: 153 VTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + G R V +Y LI++ TI+E +L++ K + +L ++ Sbjct: 1152 ----HRIGQTRNVSIYRLISERTIEENILRKATQKRRLGELAID 1191 >gi|323448072|gb|EGB03975.1| hypothetical protein AURANDRAFT_55360 [Aureococcus anophagefferens] Length = 1291 Score = 93.1 bits (230), Expect = 2e-17, Method: Composition-based stats. Identities = 27/116 (23%), Positives = 44/116 (37%), Gaps = 11/116 (9%) Query: 76 HFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGK-IPLLFAHPASCGHGLNLQYGGNILVF 134 RL P G + +N I S G G+NL G + ++F Sbjct: 544 WHGHSYLRLDGGTPPGE----RQRLMDRFNSDAFIFCFVLSTRSGGLGINLT-GADTVIF 598 Query: 135 FSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 + W+ Q ++R + G R V +Y LI T++E +L + R K + Sbjct: 599 YDSDWNPAMDAQAMDR-----AHRIGQTRDVHIYRLICIATVEENILLKARQKQKL 649 >gi|242784804|ref|XP_002480466.1| TBP associated factor (Mot1), putative [Talaromyces stipitatus ATCC 10500] gi|218720613|gb|EED20032.1| TBP associated factor (Mot1), putative [Talaromyces stipitatus ATCC 10500] Length = 1894 Score = 93.1 bits (230), Expect = 2e-17, Method: Composition-based stats. Identities = 32/164 (19%), Positives = 67/164 (40%), Gaps = 18/164 (10%) Query: 34 QLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRT 93 +L GA Y + ++K + I+++ ++ + + Sbjct: 1660 ELDTGASYVSPHRALVF---CQMKEMLDIVQEDVLKKMLPSVQYL--------RLDGSVE 1708 Query: 94 LDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIG 152 K + ++N + +L + G GLNL G + ++F W+ ++ Q ++R Sbjct: 1709 ATKRQNIVNQFNTDPSYDVLLLTTSVGGLGLNLT-GADTVIFVEHDWNPQKDIQAMDR-- 1765 Query: 153 VTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + G K+ V VY LI + T++E +L R K + ++N Sbjct: 1766 ---AHRIGQKKVVNVYRLITRGTLEEKILSLQRFKIDVASTVVN 1806 >gi|325095549|gb|EGC48859.1| SNF2-family ATP dependent chromatin remodeling factor [Ajellomyces capsulatus H88] Length = 1423 Score = 93.1 bits (230), Expect = 2e-17, Method: Composition-based stats. Identities = 38/225 (16%), Positives = 76/225 (33%), Gaps = 33/225 (14%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQL---ANGA----VYYDEEKHWKEVHD- 53 K Y + + + +QL N DE + +D Sbjct: 782 KLYKQLATHNKLVVSDGKGGKTGVRGLSNMLMQLRKLCNHPFVFESVEDEMNPGRATNDL 841 Query: 54 -----EKIKALEVIIE--KANAAPIIVAYHFNSD---------LARLQKAFPQGRTLDKD 97 K + L+ I+ +A+ +++ + L ++ G T D Sbjct: 842 IWRTAGKFELLDRILPKFQASGHRVLMFFQMTQIMNIMEDFLRLRGMKYLRLDGSTKSDD 901 Query: 98 PCTI-QEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 + +E+N + G GLNLQ + ++ + W+ + Q Sbjct: 902 RSDLLKEFNAPGSDYFCFLLSTRAGGLGLNLQT-ADTVIIYDSDWNPHQDLQA-----QD 955 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 R + G K V + LI N+++E +L+ + K + ++ A K Sbjct: 956 RAHRIGQKNEVRILRLITSNSVEERILEAAQFKLDMDGKVIQAGK 1000 >gi|331224559|ref|XP_003324951.1| RAD5 [Puccinia graminis f. sp. tritici CRL 75-36-700-3] gi|309303941|gb|EFP80532.1| RAD5 [Puccinia graminis f. sp. tritici CRL 75-36-700-3] Length = 789 Score = 92.7 bits (229), Expect = 2e-17, Method: Composition-based stats. Identities = 32/172 (18%), Positives = 59/172 (34%), Gaps = 21/172 (12%) Query: 44 EEKHWKEVHDEKIKALEVIIEKANAAP--IIVAYHFNSDLARLQKAFPQG---------- 91 E ++ L+ I + P IV F S L ++ + Sbjct: 549 EGMQSSTKVSRLLELLDEIKAEDTKTPKKTIVFSQFTSFLNLIEPFIKKAGYGYTRYDGA 608 Query: 92 -RTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 +K + ++ K +L GLNL + ++ WW+ Q +R Sbjct: 609 KSPDEKTRALEKIKSDPKCTVLLISLKCGSVGLNLTC-CSRVILMDPWWNPSIETQAFDR 667 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL--NALKK 200 + G + V Y + +TI++ +LQ K ++ + L A KK Sbjct: 668 -----AHRFGQRDDVKCYKITIADTIEDRILQLQEDKQSLANQALGTEAAKK 714 >gi|302423562|ref|XP_003009611.1| ISWI chromatin-remodeling complex ATPase ISW2 [Verticillium albo-atrum VaMs.102] gi|261352757|gb|EEY15185.1| ISWI chromatin-remodeling complex ATPase ISW2 [Verticillium albo-atrum VaMs.102] Length = 846 Score = 92.7 bits (229), Expect = 2e-17, Method: Composition-based stats. Identities = 21/148 (14%), Positives = 55/148 (37%), Gaps = 17/148 (11%) Query: 68 AAPIIVAYHFNSDLARLQK----------AFPQGRTLDKDPCTIQEWNEG-KIPLLFAHP 116 +++ F + L L + + I +N + Sbjct: 629 GHKVLIFSQFKTQLDILHDYCTFRKLKICRIDGSVSQAERQEHIDAFNSDSDFKVFLLST 688 Query: 117 ASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTI 176 + G G+NL + ++ F W+ ++ Q +R+ + G + V ++ L + T+ Sbjct: 689 RAGGQGINLT-AADTVILFDSDWNPQQDLQAQDRV-----HRLGQTKPVVIFRLATKGTV 742 Query: 177 DELVLQRLRTKSTIQDLLLNALKKETIH 204 ++ +L + K ++ L++ + T+ Sbjct: 743 EDSLLLSVEAKRRLEKLVIKGGQFRTMG 770 >gi|242243119|ref|ZP_04797564.1| phage helicase [Staphylococcus epidermidis W23144] gi|242233467|gb|EES35779.1| phage helicase [Staphylococcus epidermidis W23144] Length = 413 Score = 92.7 bits (229), Expect = 2e-17, Method: Composition-based stats. Identities = 38/198 (19%), Positives = 71/198 (35%), Gaps = 23/198 (11%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEV 61 K+Y +F RE L+ + A ++ T+ L + K+ L+ Sbjct: 232 KEYDEFIREGIVQLKDRKLIAETASVGTMNARLLCTAF------------NQNKLSMLKD 279 Query: 62 IIEKANAAPIIVAYHFNSDLARLQKAFPQG----RTLDKDPCTIQEWNEGKIPLLFAHPA 117 ++E +I+ Y +N + ++ + ++ D + K + Sbjct: 280 LLESTEDR-LIIFYQYNLEKEAIENVVKELNKPISYINGDLVDKNAYENKKSSITLVQYQ 338 Query: 118 SCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 S G NLQ N ++FF L + +Q +R + G +R F YY++ T + Sbjct: 339 SGSFGHNLQK-ANKIIFFGLPNRVSFFEQSRKR-----THRIGQERPCFYYYMLTLGTYE 392 Query: 178 ELVLQRLRTKSTIQDLLL 195 Q L D L Sbjct: 393 WKNYQTLVDGKDYNDELF 410 >gi|189191218|ref|XP_001931948.1| DNA repair protein rad5 [Pyrenophora tritici-repentis Pt-1C-BFP] gi|187973554|gb|EDU41053.1| DNA repair protein rad5 [Pyrenophora tritici-repentis Pt-1C-BFP] Length = 1242 Score = 92.7 bits (229), Expect = 2e-17, Method: Composition-based stats. Identities = 29/168 (17%), Positives = 60/168 (35%), Gaps = 18/168 (10%) Query: 45 EKHWKEVHDEKIKALEVIIEKANA-APIIVAYHFNSDLARLQKAFPQG-----------R 92 KI+ L I+ + +IV F S L ++ + R Sbjct: 1005 NDTPSLTPSTKIRQLLAILSQETPSHKVIVFSQFTSMLDLIEPFLRRAHYTYTRYDGSMR 1064 Query: 93 TLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIG 152 ++ + ++ K +L GLNL + +V +W+ +Q I+R+ Sbjct: 1065 NDHREASLHKLRSDPKTRVLLCSLKCGSLGLNLT-AASRVVIMEPFWNPFVEEQAIDRV- 1122 Query: 153 VTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKK 200 + V VY L +++++E +L+ K + + + K Sbjct: 1123 ----HRLNQTVDVTVYRLSIRDSVEERILELQEAKRKLANAAIEGGKA 1166 >gi|67475316|ref|XP_653352.1| DNA repair protein [Entamoeba histolytica HM-1:IMSS] gi|56470295|gb|EAL47966.1| DNA repair protein, putative [Entamoeba histolytica HM-1:IMSS] Length = 884 Score = 92.7 bits (229), Expect = 2e-17, Method: Composition-based stats. Identities = 32/175 (18%), Positives = 63/175 (36%), Gaps = 22/175 (12%) Query: 35 LANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQ---- 90 L G +D E K K+ A + + I++ ++ L + + Sbjct: 593 LPKGDALWDMELSGKTAFLAKLLAFL----RKHKEKIVIVSNYTETLNFIAHHCKKCGYP 648 Query: 91 ------GRTLDKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLE 142 K + +N ++ + + G GLNL G N LV F W+ Sbjct: 649 YIQLDGSVAATKRTQMVNRFNNPELDEFIFLLSSKAGGCGLNLVGGAN-LVMFDPDWNPA 707 Query: 143 EHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 +Q + R+ + G K+ +Y ++ T++E + QR K + ++ Sbjct: 708 NDEQAMGRVW-----RDGQKKKCHIYRTLSAGTVEEKMYQRQIKKLELAGKVVEG 757 >gi|327308272|ref|XP_003238827.1| SNF2 family helicase/ATPase [Trichophyton rubrum CBS 118892] gi|326459083|gb|EGD84536.1| SNF2 family helicase/ATPase [Trichophyton rubrum CBS 118892] Length = 1113 Score = 92.7 bits (229), Expect = 2e-17, Method: Composition-based stats. Identities = 41/231 (17%), Positives = 85/231 (36%), Gaps = 43/231 (18%) Query: 6 KFQRELYCDLQGENIEAFNSAS--------KTVKCLQLAN-------------GAVYYDE 44 + Q + Y + ++I+A N A +QL G Y + Sbjct: 428 EMQVKWYQKILEKDIDAVNGAQGNRESKTRLLNIVMQLRKCCNHPYLFEGAEPGPPYTTD 487 Query: 45 EKHWKEVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQ---------KAFPQGRT 93 E + K+ L+ ++ + + +++ + L L+ G T Sbjct: 488 EHLI--DNSGKMVILDKLLNRLFKQGSRVLIFSQMSRVLDILEDYCVFRGHEYCRIDGST 545 Query: 94 LDKDP-CTIQEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 +D I E+N + + + G G+NL +I++ F W+ + Q ++R Sbjct: 546 AHEDRIQAIDEYNRPGSEKFVFLLTTRAGGLGINLTT-ADIVILFDSDWNPQADLQAMDR 604 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 + G + V V+ I + I+E VL+R K + L++ + + Sbjct: 605 -----AHRIGQTKQVVVFRFITEKAIEEKVLERAAQKLRLDQLVIQQGRAQ 650 >gi|302504248|ref|XP_003014083.1| hypothetical protein ARB_07803 [Arthroderma benhamiae CBS 112371] gi|291177650|gb|EFE33443.1| hypothetical protein ARB_07803 [Arthroderma benhamiae CBS 112371] Length = 1128 Score = 92.7 bits (229), Expect = 2e-17, Method: Composition-based stats. Identities = 41/231 (17%), Positives = 85/231 (36%), Gaps = 43/231 (18%) Query: 6 KFQRELYCDLQGENIEAFNSAS--------KTVKCLQLAN-------------GAVYYDE 44 + Q + Y + ++I+A N A +QL G Y + Sbjct: 419 EMQVKWYQKILEKDIDAVNGAQGNRESKTRLLNIVMQLRKCCNHPYLFEGAEPGPPYTTD 478 Query: 45 EKHWKEVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQ---------KAFPQGRT 93 E + K+ L+ ++ + + +++ + L L+ G T Sbjct: 479 EHLI--DNSGKMVILDKLLNRLFKQGSRVLIFSQMSRVLDILEDYCVFRGHEYCRIDGST 536 Query: 94 LDKDP-CTIQEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 +D I E+N + + + G G+NL +I++ F W+ + Q ++R Sbjct: 537 AHEDRIQAIDEYNRPGSEKFVFLLTTRAGGLGINLTT-ADIVILFDSDWNPQADLQAMDR 595 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 + G + V V+ I + I+E VL+R K + L++ + + Sbjct: 596 -----AHRIGQTKQVVVFRFITEKAIEEKVLERAAQKLRLDQLVIQQGRAQ 641 >gi|242767903|ref|XP_002341462.1| chromodomain helicase (Chd1), putative [Talaromyces stipitatus ATCC 10500] gi|218724658|gb|EED24075.1| chromodomain helicase (Chd1), putative [Talaromyces stipitatus ATCC 10500] Length = 1499 Score = 92.7 bits (229), Expect = 2e-17, Method: Composition-based stats. Identities = 30/151 (19%), Positives = 58/151 (38%), Gaps = 20/151 (13%) Query: 51 VHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQKAFP----QGRTLDKD------P 98 K+ L+ ++ K + +++ L L Q + LD Sbjct: 751 TSSGKMMLLDQLLAKLKRDGHRVLIFSQMVKMLDILGDYMRFRGYQYQRLDGTISATNRR 810 Query: 99 CTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 ++ +N + G G+NL + ++ F W+ + Q + R Sbjct: 811 VAMEHFNAPDSSDFAFLLSTRAGGLGINLMT-ADTVILFDSDWNPQADLQAMAR-----A 864 Query: 157 RQAGFKRAVFVYYLIAQNTIDELVLQRLRTK 187 + G + V VY L++++TI+E VL+R R K Sbjct: 865 HRIGQTKPVSVYRLVSKDTIEEEVLERARNK 895 >gi|156398438|ref|XP_001638195.1| predicted protein [Nematostella vectensis] gi|156225314|gb|EDO46132.1| predicted protein [Nematostella vectensis] Length = 614 Score = 92.7 bits (229), Expect = 2e-17, Method: Composition-based stats. Identities = 31/154 (20%), Positives = 64/154 (41%), Gaps = 20/154 (12%) Query: 56 IKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLD-----------KDPCTIQEW 104 + L + EK + +++ ++++L + + + GR L + ++E+ Sbjct: 396 LDKLLRMFEK-DKCKVLLFS-YSTELLNILENYVIGRGLVFSRLDGQTSPAQRMRVVREF 453 Query: 105 N-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKR 163 N I + + G GLN G N+++ F W+ Q R + G +R Sbjct: 454 NGNRDIFICLVSTKAGGLGLNFT-GANVVIIFDPTWNPSNDLQA-----QDRAYRIGQRR 507 Query: 164 AVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 V V LI+ TI+E++ R K + + ++ Sbjct: 508 DVQVLRLISSGTIEEMMYLRQIYKQQMANTAISG 541 >gi|154344042|ref|XP_001567965.1| DNA-dependent ATPase [Leishmania braziliensis MHOM/BR/75/M2904] gi|134065299|emb|CAM40727.1| putative DNA-dependent ATPase [Leishmania braziliensis MHOM/BR/75/M2904] Length = 1103 Score = 92.7 bits (229), Expect = 2e-17, Method: Composition-based stats. Identities = 26/142 (18%), Positives = 53/142 (37%), Gaps = 18/142 (12%) Query: 67 NAAPIIVAYHFNSDLARLQ-----KAFPQGRTLDKDPCTIQE-----WNEG--KIPLLFA 114 +++ F S L L+ + F R ++ +N + Sbjct: 489 GKHKVLIFSQFTSMLNILEDYCNMRGFMYCRIDGNTSGYERDSQMASFNSPTSDYFIFLL 548 Query: 115 HPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQN 174 + G G+NLQ N ++ + W+ + Q R + G KR+V VY + Sbjct: 549 STRAGGLGINLQ-AANHVILYDSDWNPQMDLQA-----QDRAHRIGQKRSVRVYRFVTDG 602 Query: 175 TIDELVLQRLRTKSTIQDLLLN 196 T++E + +R K + +++ Sbjct: 603 TLEEKMYRRALKKLYLDAVVVQ 624 >gi|19075201|ref|NP_587701.1| Rad16 homolog Rhp16 [Schizosaccharomyces pombe 972h-] gi|3647341|emb|CAA21065.1| Rad16 homolog Rhp16 [Schizosaccharomyces pombe] Length = 963 Score = 92.7 bits (229), Expect = 2e-17, Method: Composition-based stats. Identities = 37/160 (23%), Positives = 63/160 (39%), Gaps = 21/160 (13%) Query: 52 HDEKIKALEV----IIEKANAAPIIVAYHFNSDLA----RLQKA------FPQGRTLDKD 97 KI+AL + +K IV F S L RL+KA G T Sbjct: 790 SSTKIEALVEELYLLRKKDRTLKSIVFSQFTSMLDLIHWRLRKAGFNCVKLDGGMTPKAR 849 Query: 98 PCTIQEW-NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 TI+ + N+ I + + G LNL + + WW+ Q ++RI Sbjct: 850 AATIEAFSNDINITIFLVSLKAGGVALNLTE-ASQVFMMDPWWNGAVQWQAMDRI----- 903 Query: 157 RQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + G KR + V L +N+I+ +++ K+ + ++ Sbjct: 904 HRIGQKRPIKVITLCIENSIESKIIELQEKKAQMIHATID 943 >gi|170094100|ref|XP_001878271.1| SNF2 superfamily chromatin remodeling protein [Laccaria bicolor S238N-H82] gi|164646725|gb|EDR10970.1| SNF2 superfamily chromatin remodeling protein [Laccaria bicolor S238N-H82] Length = 1936 Score = 92.7 bits (229), Expect = 2e-17, Method: Composition-based stats. Identities = 30/169 (17%), Positives = 58/169 (34%), Gaps = 24/169 (14%) Query: 45 EKHWKEVHDEKIKALEVIIEKANA----APIIVAYHFNSDLARLQK-------------A 87 D + L +E+ + +++ L ++ Sbjct: 1701 GGSAIASADSQKSELIDTVEEPGSSFSQHRVLIFCQMKQMLDIIESDLFKVHMPSVTYMR 1760 Query: 88 FPQGRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 K +Q +N + I L G GL L G + ++F W+ + Q Sbjct: 1761 LDGATDAGKRHAIVQTFNSDPSIDCLLLTTHVGGLGLTLT-GADTVIFVEHDWNPMKDLQ 1819 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 ++R + G K+ V VY LI + T++E ++ R K I ++ Sbjct: 1820 AMDR-----AHRIGQKKVVNVYRLITKGTLEEKIMGLQRFKLNIAHSVV 1863 >gi|327302542|ref|XP_003235963.1| SNF2 family helicase/ATPase [Trichophyton rubrum CBS 118892] gi|326461305|gb|EGD86758.1| SNF2 family helicase/ATPase [Trichophyton rubrum CBS 118892] Length = 1053 Score = 92.7 bits (229), Expect = 2e-17, Method: Composition-based stats. Identities = 29/158 (18%), Positives = 58/158 (36%), Gaps = 18/158 (11%) Query: 52 HDEKIKALEVIIEKANAA-PIIVAYHFNSDLARLQKAFPQG-----------RTLDKDPC 99 KI+ L ++++ + IV F S L +++ G R ++ Sbjct: 812 TSAKIRHLMRVLKRESGQFKFIVFSVFTSMLDKIEPFLKNGGIGYARYDGGMRNDLREAS 871 Query: 100 TIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQA 159 + N +L + GLNL + +V +W+ +Q I+R+ + Sbjct: 872 LNRLRNSSGTRVLLCSLRAGSLGLNLT-AASRVVILEPFWNPFVEEQAIDRV-----HRL 925 Query: 160 GFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 V VY L + T++E +L+ K + + Sbjct: 926 NQTVDVKVYKLTIKGTVEERILELQERKRELAKSTIEG 963 >gi|312190395|gb|ADQ43195.1| unknown [Eutrema parvulum] Length = 763 Score = 92.7 bits (229), Expect = 2e-17, Method: Composition-based stats. Identities = 25/161 (15%), Positives = 61/161 (37%), Gaps = 19/161 (11%) Query: 49 KEVHDEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQ---------KAFPQGRTLDKD 97 + K + L ++ +++ + S L L+ G + Sbjct: 585 HVMLSAKCRTLAELLPSMKKSGHRVLIFSQWTSMLDILEWTLDVIGVTYRRLDGTQVTDR 644 Query: 98 PCTIQEWNEGK-IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 + +N K I + G GLNL G + ++ + ++ + +Q +R Sbjct: 645 QTIVDTFNNDKSIFACLLSTRAGGQGLNLT-GADTVIIHDMDFNPQIDRQAEDRC----- 698 Query: 157 RQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + G + V ++ L+ ++T+DE + + + K + +L + Sbjct: 699 HRIGQTKPVTIF-LVTKSTVDENIYEIAKRKLVLDAAVLES 738 >gi|255077082|ref|XP_002502193.1| SNF2 super family [Micromonas sp. RCC299] gi|226517458|gb|ACO63451.1| SNF2 super family [Micromonas sp. RCC299] Length = 786 Score = 92.7 bits (229), Expect = 2e-17, Method: Composition-based stats. Identities = 33/163 (20%), Positives = 56/163 (34%), Gaps = 22/163 (13%) Query: 26 ASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQ 85 A+ ++A+ + E + + + RL Sbjct: 521 ATLRTLLREMASNSSGDGERMVVVSGFSAALDLAAGLCAELG-----------LATDRLD 569 Query: 86 KAFPQGRTLDKDPCTIQEWNEGKI-PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEH 144 P D ++ +N G+ ++ + G GLNL G LV F W+ Sbjct: 570 GRVP----PDARSGLVRNFNAGRGGRVMLLSCVAGGAGLNL-VGACRLVLFDTSWNPAHD 624 Query: 145 QQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTK 187 Q + R+ + G R V +Y L+A T++E V QR K Sbjct: 625 NQAMARVW-----RDGQTRPVTIYRLLAAGTVEEKVFQRQLLK 662 >gi|212542839|ref|XP_002151574.1| chromodomain helicase (Chd1), putative [Penicillium marneffei ATCC 18224] gi|210066481|gb|EEA20574.1| chromodomain helicase (Chd1), putative [Penicillium marneffei ATCC 18224] Length = 1497 Score = 92.7 bits (229), Expect = 2e-17, Method: Composition-based stats. Identities = 31/151 (20%), Positives = 59/151 (39%), Gaps = 20/151 (13%) Query: 51 VHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQKAFP----QGRTLDKD------P 98 K+ L+ ++ K + +++ L L Q + LD Sbjct: 751 TSSGKMMLLDQLLAKLKRDGHRVLIFSQMVKMLDLLGDYMRFRGYQYQRLDGTISAANRR 810 Query: 99 CTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 ++ +N + + G G+NL + ++ F W+ + Q + R Sbjct: 811 VAMEHFNAPESSDFAFLLSTRAGGLGINLMT-ADTVILFDSDWNPQADLQAMAR-----A 864 Query: 157 RQAGFKRAVFVYYLIAQNTIDELVLQRLRTK 187 + G R V VY L++++TI+E VL+R R K Sbjct: 865 HRIGQTRPVSVYRLVSKDTIEEEVLERARNK 895 >gi|124512694|ref|XP_001349480.1| DNA repair protein rad54, putative [Plasmodium falciparum 3D7] gi|23499249|emb|CAD51329.1| DNA repair protein rad54, putative [Plasmodium falciparum 3D7] Length = 1239 Score = 92.7 bits (229), Expect = 2e-17, Method: Composition-based stats. Identities = 28/144 (19%), Positives = 57/144 (39%), Gaps = 17/144 (11%) Query: 63 IEKANAAPIIVAYHFNSDLARLQ----------KAFPQGRTLDKDPCTIQEWN-EGKIPL 111 I++ +++ ++ L ++ G + K I ++ I + Sbjct: 622 IKQNTNDKVVIVSNYTQTLDYMEILCKENMYKFVRLDGGINIKKRHKVINDFTHSADIFI 681 Query: 112 LFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLI 171 S G G+NL N L+ W+ +Q + R+ + G K+ ++Y L Sbjct: 682 FLLSSKSGGCGINL-ISSNRLILLDPDWNPANDKQALARVW-----REGQKKICYIYRLF 735 Query: 172 AQNTIDELVLQRLRTKSTIQDLLL 195 TIDE V QR +K + ++++ Sbjct: 736 CTGTIDEKVYQRQISKDGLSNMIV 759 >gi|50288685|ref|XP_446772.1| hypothetical protein [Candida glabrata CBS 138] gi|49526080|emb|CAG59699.1| unnamed protein product [Candida glabrata] Length = 1408 Score = 92.7 bits (229), Expect = 2e-17, Method: Composition-based stats. Identities = 28/164 (17%), Positives = 63/164 (38%), Gaps = 22/164 (13%) Query: 52 HDEKIKALEVII----EKANAAPIIVAYHFNSDLARLQ------------KAFPQGRTLD 95 K+ +I EK+++ II+ F + L L+ K Sbjct: 1230 PSTKMNQCMDVINKVFEKSDSEKIIIFSQFTTFLDLLEHILATRLKISCLKYTGDMNAKV 1289 Query: 96 KDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTR 155 + + ++E +L + GL L ++++ +W+ +Q +R Sbjct: 1290 RSEIISRFYSEEDKRVLLISMKAGNSGLTLTCANHVVI-VDPFWNPYVEEQAQDRC---- 1344 Query: 156 QRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 + R V V+ L +N++++ +L+ + K + D ++A K Sbjct: 1345 -YRISQTREVTVHRLFIKNSVEDRILELQKLKRDMVDAAMDAKK 1387 >gi|326926799|ref|XP_003209584.1| PREDICTED: chromodomain-helicase-DNA-binding protein 2-like [Meleagris gallopavo] Length = 1837 Score = 92.7 bits (229), Expect = 2e-17, Method: Composition-based stats. Identities = 25/161 (15%), Positives = 59/161 (36%), Gaps = 20/161 (12%) Query: 52 HDEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQKAF---------PQGRTLDK-DPC 99 K+ L+ ++ + +++ L L + G + Sbjct: 792 SSGKLILLDKLLTRLRDRGNRVLIFSQMVRMLDILAEYLTIKHYPFQRLDGSIKGEIRKQ 851 Query: 100 TIQEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 + +N + + G G+NL + +V F W+ + Q R Sbjct: 852 ALDHFNADGSEDFCFLLSTRAGGLGINL-ASADTVVIFDSDWNPQNDLQAQAR-----AH 905 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNAL 198 + G K+ V +Y L+ + T++E +++R + K + L++ + Sbjct: 906 RIGQKKQVNIYRLVTKGTVEEEIIERAKKKMVLDHLVIQRM 946 >gi|239613379|gb|EEQ90366.1| chromodomain helicase [Ajellomyces dermatitidis ER-3] Length = 1513 Score = 92.7 bits (229), Expect = 2e-17, Method: Composition-based stats. Identities = 31/151 (20%), Positives = 59/151 (39%), Gaps = 20/151 (13%) Query: 51 VHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQKAFPQG----RTLDKD------P 98 K+ L+ ++ K + +++ L L + LD Sbjct: 778 TSSGKMMLLDQLLAKLKKDGHRVLIFSQMVRMLDILADYMDVRGYAYQRLDGTIAAGPRR 837 Query: 99 CTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 +I+ +N + + G G+NL + +V F W+ + Q + R Sbjct: 838 LSIEHFNAPESNDFAFLLSTRAGGLGINLMT-ADTVVLFDSDWNPQADLQAMAR-----A 891 Query: 157 RQAGFKRAVFVYYLIAQNTIDELVLQRLRTK 187 + G R V VY L++++T++E VL+R R K Sbjct: 892 HRIGQTRPVSVYRLVSKDTVEEEVLERARNK 922 >gi|261194801|ref|XP_002623805.1| chromodomain helicase [Ajellomyces dermatitidis SLH14081] gi|239588343|gb|EEQ70986.1| chromodomain helicase [Ajellomyces dermatitidis SLH14081] Length = 1513 Score = 92.7 bits (229), Expect = 2e-17, Method: Composition-based stats. Identities = 31/151 (20%), Positives = 59/151 (39%), Gaps = 20/151 (13%) Query: 51 VHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQKAFPQG----RTLDKD------P 98 K+ L+ ++ K + +++ L L + LD Sbjct: 778 TSSGKMMLLDQLLAKLKKDGHRVLIFSQMVRMLDILADYMDVRGYAYQRLDGTIAAGPRR 837 Query: 99 CTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 +I+ +N + + G G+NL + +V F W+ + Q + R Sbjct: 838 LSIEHFNAPESNDFAFLLSTRAGGLGINLMT-ADTVVLFDSDWNPQADLQAMAR-----A 891 Query: 157 RQAGFKRAVFVYYLIAQNTIDELVLQRLRTK 187 + G R V VY L++++T++E VL+R R K Sbjct: 892 HRIGQTRPVSVYRLVSKDTVEEEVLERARNK 922 >gi|303279448|ref|XP_003059017.1| SNF2 super family [Micromonas pusilla CCMP1545] gi|226460177|gb|EEH57472.1| SNF2 super family [Micromonas pusilla CCMP1545] Length = 811 Score = 92.7 bits (229), Expect = 2e-17, Method: Composition-based stats. Identities = 32/164 (19%), Positives = 62/164 (37%), Gaps = 20/164 (12%) Query: 51 VHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAF---------PQGRTLDKDPC 99 K + LE ++ + + ++ + L L+ A G T ++ Sbjct: 636 FDASKTRKLETLLADLKSKGSRPLIFSQWKIVLDILEWALRERGHKFVRLDGSTAVEERQ 695 Query: 100 TI-QEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 I +N I + G GLNL G +++V ++ + I+R R Sbjct: 696 RICDAFNRDGSDIFAFLLSTRAGGQGLNLT-GADVVVIHDCDFNPQ-----IDRQAEDRS 749 Query: 157 RQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKK 200 + G + V VY L+ T+DE +++ K + +L+ K Sbjct: 750 HRLGQTKPVTVYRLVTSGTVDERIVEIAEGKLALDAAILSDPKA 793 >gi|148692894|gb|EDL24841.1| mCG6355 [Mus musculus] Length = 1330 Score = 92.7 bits (229), Expect = 2e-17, Method: Composition-based stats. Identities = 34/169 (20%), Positives = 62/169 (36%), Gaps = 21/169 (12%) Query: 46 KHWKEVHDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQK----------AFPQGRT 93 HW+ K+ +E +++ +++ L L+ T Sbjct: 738 GHWRR--SGKMIVVESLLKIWHRQGQRVLLFSQSRQMLHILEVFLRAHKYSYLKMDGTTT 795 Query: 94 LDKDPCTIQEWNEG-KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIG 152 + I ++NE I + G G+NL G N ++ + W+ Q ER Sbjct: 796 IASRQPLITKYNEDTSIFVFLLTTRVGGLGVNLT-GANRVIIYDPDWNPSTDTQARERAW 854 Query: 153 VTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 + G K+ V VY L+ TI+E + R K + + +L K+ Sbjct: 855 -----RIGQKKQVTVYRLLTAGTIEEKIYHRQIFKQFLTNRVLKDPKQR 898 >gi|147790062|emb|CAN75984.1| hypothetical protein VITISV_012188 [Vitis vinifera] Length = 399 Score = 92.7 bits (229), Expect = 2e-17, Method: Composition-based stats. Identities = 31/160 (19%), Positives = 68/160 (42%), Gaps = 20/160 (12%) Query: 52 HDEKIKALEVIIEKAN--AAPIIVAYHFNSDLA---------RLQKAFPQGRTLDKDPCT 100 K + L+ ++ K +++ + ++ G T ++ T Sbjct: 4 ASGKFELLDRLLPKLQKAGHRVLLFSQMTRLMDILEIYLQMNEIKYLRLDGSTKTEERGT 63 Query: 101 -IQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 ++++N P + + G GLNLQ + ++ F W+ + QQ +R Sbjct: 64 KLKQFNAPDSPYFMFLLSTRAGGLGLNLQT-ADTVIIFDSDWNPQMDQQAEDR-----AH 117 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + G K+ V V+ L++ +I+E++L+R + K I ++ A Sbjct: 118 RIGQKKEVRVFVLVSVGSIEEVILERAKQKMGIDAKVIQA 157 >gi|66826589|ref|XP_646649.1| SNF2-related domain-containing protein [Dictyostelium discoideum AX4] gi|60474939|gb|EAL72876.1| SNF2-related domain-containing protein [Dictyostelium discoideum AX4] Length = 3247 Score = 92.7 bits (229), Expect = 2e-17, Method: Composition-based stats. Identities = 39/220 (17%), Positives = 83/220 (37%), Gaps = 30/220 (13%) Query: 2 KQYHKFQRELYCDL-QGENIEAFNSASKTVK-----CLQLANGA-VYYDEEKHWKEV--- 51 K Y + + L + +K +K ++ N ++YD+E + + Sbjct: 1964 KMYDLIKTKGVSKLASSGGADGNPKLAKGLKNTYVQLRKICNHPYLFYDDEYNIDDNLIR 2023 Query: 52 HDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAF---------PQGRTL-DKDPC 99 + K L+ ++ K A +++ + L+ F G T D+ Sbjct: 2024 YAGKFDLLDRLLPKLKAAGHRVLIFSQMTQLINILEVFFAYKDYKFLRLDGSTKSDERGH 2083 Query: 100 TIQEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 ++ +N + + + G GLNLQ + ++ F W+ + Q R Sbjct: 2084 LLELFNAPNSEYFIFVLSTRAGGLGLNLQT-ADTVIIFDSDWNPQMDLQA-----QDRAH 2137 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + G K+ V V L+ ++++E +L R K + ++ A Sbjct: 2138 RIGQKQTVRVLRLVTAHSVEESILARANFKKELDKKIIQA 2177 >gi|327356382|gb|EGE85239.1| RSC complex subunit [Ajellomyces dermatitidis ATCC 18188] Length = 1487 Score = 92.7 bits (229), Expect = 2e-17, Method: Composition-based stats. Identities = 39/225 (17%), Positives = 76/225 (33%), Gaps = 33/225 (14%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQL---ANGA----VYYDEEKHWKEVHD- 53 K Y + + + +QL N DE + +D Sbjct: 844 KLYKQLATHNKLVVSDGKGGKTGVRGLSNMLMQLRKLCNHPFVFESVEDEMNPGRATNDL 903 Query: 54 -----EKIKALEVIIEK--ANAAPIIVAYHFNSD---------LARLQKAFPQGRTLDKD 97 K + L+ I+ K A+ +++ + L ++ G T D Sbjct: 904 IWRTAGKFELLDRILPKFKASGHRVLMFFQMTQIMNIMEDFLRLRGMKYLRLDGSTKSDD 963 Query: 98 PCTI-QEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 + +E+N + G GLNLQ + ++ + W+ + Q Sbjct: 964 RSDLLKEFNAPGSDYFCFLLSTRAGGLGLNLQT-ADTVIIYDSDWNPHQDLQA-----QD 1017 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 R + G K V + LI N+++E +L+ + K + ++ A K Sbjct: 1018 RAHRIGQKNEVRILRLITSNSVEERILEAAQFKLDMDGKVIQAGK 1062 >gi|299117330|emb|CBN75290.1| similar to helicase, lymphoid-specific isoform 9 [Ectocarpus siliculosus] Length = 944 Score = 92.7 bits (229), Expect = 2e-17, Method: Composition-based stats. Identities = 32/189 (16%), Positives = 69/189 (36%), Gaps = 29/189 (15%) Query: 32 CLQLANGAVYYDEEKHW-----KEVHDEKIKALEVIIEK--ANAAPIIVAYHFNS----- 79 Q+ +G D KH K++ L ++ + + I++ + Sbjct: 740 LHQVCSGF---DSLKHLCLSEETLFTSAKMERLRALLPQLVSEGHRILLFSQWTRLLDLL 796 Query: 80 -----DLARLQKAFPQGRT-LDKDPCTIQEWNEG-KIPLLFAHPASCGHGLNLQYGGNIL 132 + + G T + + I ++ IP+ + G G+NL + + Sbjct: 797 EVLLGESMGMTFCRLDGSTPVSERKALIDKFGADTSIPVFLLSTRAGGLGINLT-AADTV 855 Query: 133 VFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTI-Q 191 + + ++ E +R R + G + V V ++A T+DE + K + Q Sbjct: 856 ILHDVDFNPE-----NDRQAEDRCHRIGQTKPVTVIRMVAAGTVDEDIYLMGERKKEVNQ 910 Query: 192 DLLLNALKK 200 +L ++ KK Sbjct: 911 RVLNDSGKK 919 >gi|164426583|ref|XP_956548.2| chromatin remodelling complex ATPase chain ISW1 [Neurospora crassa OR74A] gi|157071396|gb|EAA27312.2| chromatin remodelling complex ATPase chain ISW1 [Neurospora crassa OR74A] Length = 1126 Score = 92.7 bits (229), Expect = 2e-17, Method: Composition-based stats. Identities = 39/226 (17%), Positives = 82/226 (36%), Gaps = 43/226 (19%) Query: 6 KFQRELYCDLQGENIEAFNSAS--------KTVKCLQLAN-------------GAVYYDE 44 + Q + Y + ++I+A N A +QL G Y + Sbjct: 420 EMQVKWYQKILEKDIDAVNGAGGKRESKTRLLNIVMQLRKCCNHPYLFEGAEPGPPYTTD 479 Query: 45 EKHWKEVHDEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQK----------AFPQGR 92 E + K+ L+ ++++ + +++ + L L+ G Sbjct: 480 EHLV--YNAGKMLVLDKLLKRLQKQGSRVLIFSQMSRLLDILEDYCVFRQYKYCRIDGGT 537 Query: 93 TLDKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 + I E+N+ + + G G+NL +I++ + W+ + Q ++R Sbjct: 538 AHEDRIAAIDEYNKPDSDKFVFLLTTRAGGLGINLT-SADIVILYDSDWNPQADLQAMDR 596 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + G + V VY + N I+E VL+R K + L++ Sbjct: 597 -----AHRIGQTKQVVVYRFVTDNAIEEKVLERAAQKLRLDQLVIQ 637 >gi|154273573|ref|XP_001537638.1| chromatin remodelling complex ATPase chain ISW1 [Ajellomyces capsulatus NAm1] gi|150415246|gb|EDN10599.1| chromatin remodelling complex ATPase chain ISW1 [Ajellomyces capsulatus NAm1] Length = 974 Score = 92.7 bits (229), Expect = 2e-17, Method: Composition-based stats. Identities = 44/239 (18%), Positives = 88/239 (36%), Gaps = 46/239 (19%) Query: 1 MKQY---HKFQRELYCDLQGENIEAFNSAS--------KTVKCLQLAN------------ 37 M Y Q + Y + ++I+A N A +QL Sbjct: 413 MNLYVGMSDMQVKWYQKILEKDIDAVNGAQGKRESKTRLLNIVMQLRKCCNHPYLFEGAE 472 Query: 38 -GAVYYDEEKHWKEVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARL---------Q 85 G Y +E + K+ L+ I+++ + +++ + L L Q Sbjct: 473 PGPPYTTDEHLI--DNAGKMVILDKILKRMKNQGSRVLIFSQMSRVLDILEDYCVFREHQ 530 Query: 86 KAFPQGRTLDKDP-CTIQEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLE 142 G T +D I E+N + + + G G+NL +I++ + W+ + Sbjct: 531 YCRIDGSTAHEDRIAAIDEYNRPGSEKFIFLLTTRAGGLGINLT-SADIVILYDSDWNPQ 589 Query: 143 EHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 Q ++R + G + V V+ + +N I+E VL+R K + L++ + + Sbjct: 590 ADLQAMDR-----AHRIGQTKQVVVFRFVTENAIEEKVLERAAQKLRLDQLVIQQGRAQ 643 >gi|156082193|ref|XP_001608585.1| DNA repair protein rhp54 [Plasmodium vivax SaI-1] gi|148801524|gb|EDL42923.1| DNA repair protein rhp54, putative [Plasmodium vivax] Length = 1064 Score = 92.7 bits (229), Expect = 2e-17, Method: Composition-based stats. Identities = 30/157 (19%), Positives = 61/157 (38%), Gaps = 20/157 (12%) Query: 53 DEKIKALEVI---IEKANAAPIIVAYHFNSDLARLQ----------KAFPQGRTLDKDPC 99 K + L + I++ +++ ++ L ++ G ++ K Sbjct: 526 SCKFQLLHFLLKTIKQNTTDKVVIVSNYTQTLDYMEILCKENFYKFVRLDGGISIKKRHK 585 Query: 100 TIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQ 158 I ++ I + S G G+NL N L+ W+ +Q + R+ + Sbjct: 586 VISDFTHSSDIFIFLLSSKSGGCGINL-ISSNRLILLDPDWNPANDKQALARVW-----R 639 Query: 159 AGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 G K+ ++Y L TIDE V QR +K + +++ Sbjct: 640 EGQKKICYIYRLFCTGTIDEKVYQRQISKDGLSSMIV 676 >gi|169620543|ref|XP_001803683.1| hypothetical protein SNOG_13471 [Phaeosphaeria nodorum SN15] gi|160704055|gb|EAT79355.2| hypothetical protein SNOG_13471 [Phaeosphaeria nodorum SN15] Length = 900 Score = 92.7 bits (229), Expect = 3e-17, Method: Composition-based stats. Identities = 26/142 (18%), Positives = 57/142 (40%), Gaps = 20/142 (14%) Query: 68 AAPIIVAYHFNSDLARL-----QKAFPQGRTLDKDPCT-----IQEWNEGK----IPLLF 113 +++ F + L L +++P R T I +N+ + Sbjct: 669 GHKVLIFSQFTTTLDLLGQYLDLRSWPHARIDGSVAQTDRQSQILAFNKTDKKNATNIFI 728 Query: 114 AHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQ 173 + G G+NL + ++ F W+ ++ Q ++R + G R V VY + Sbjct: 729 LSTRAGGQGINL-AAADTVILFDSDWNPQQDLQAMDR-----AHRIGQTRNVIVYRFATR 782 Query: 174 NTIDELVLQRLRTKSTIQDLLL 195 NT+++ +L+ K ++ L++ Sbjct: 783 NTVEQKLLESAEAKRRLEKLVI 804 >gi|119187661|ref|XP_001244437.1| hypothetical protein CIMG_03878 [Coccidioides immitis RS] Length = 1905 Score = 92.7 bits (229), Expect = 3e-17, Method: Composition-based stats. Identities = 39/209 (18%), Positives = 73/209 (34%), Gaps = 30/209 (14%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEV 61 +QY + QR Y + NI + A K L D + ++ Sbjct: 1627 RQYQEVQR--YLANKNSNIRDISHAPKLTALRDL-----LIDCGIGVDLSVEGELNTAAS 1679 Query: 62 IIEKANAAPIIVAYHFNSDLARLQK-------------AFPQGRTLDKDPCTIQEWN-EG 107 + ++ L +Q K + ++N + Sbjct: 1680 YVSP---HRALIFCQMKEMLDIVQNDVLKKLLPSIQYLRLDGSVEATKRQNIVNQFNTDP 1736 Query: 108 KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFV 167 +L + G GLNL G + ++F W+ ++ Q ++R + G K+ V V Sbjct: 1737 SYDVLLLTTSVGGLGLNLT-GADTVIFVEHDWNPQKDIQAMDR-----AHRIGQKKVVNV 1790 Query: 168 YYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 Y LI + T++E +L R K + ++N Sbjct: 1791 YRLITRGTLEEKILNLQRFKIDVASTVVN 1819 >gi|327351880|gb|EGE80737.1| chromodomain helicase hrp3 [Ajellomyces dermatitidis ATCC 18188] Length = 1549 Score = 92.7 bits (229), Expect = 3e-17, Method: Composition-based stats. Identities = 31/151 (20%), Positives = 59/151 (39%), Gaps = 20/151 (13%) Query: 51 VHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQKAFPQG----RTLDKD------P 98 K+ L+ ++ K + +++ L L + LD Sbjct: 778 TSSGKMMLLDQLLAKLKKDGHRVLIFSQMVRMLDILADYMDVRGYAYQRLDGTIAAGPRR 837 Query: 99 CTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 +I+ +N + + G G+NL + +V F W+ + Q + R Sbjct: 838 LSIEHFNAPESNDFAFLLSTRAGGLGINLMT-ADTVVLFDSDWNPQADLQAMAR-----A 891 Query: 157 RQAGFKRAVFVYYLIAQNTIDELVLQRLRTK 187 + G R V VY L++++T++E VL+R R K Sbjct: 892 HRIGQTRPVSVYRLVSKDTVEEEVLERARNK 922 >gi|221053502|ref|XP_002258125.1| atp-dependant helicase [Plasmodium knowlesi strain H] gi|193807958|emb|CAQ38662.1| atp-dependant helicase, putative [Plasmodium knowlesi strain H] Length = 1759 Score = 92.7 bits (229), Expect = 3e-17, Method: Composition-based stats. Identities = 27/163 (16%), Positives = 64/163 (39%), Gaps = 19/163 (11%) Query: 47 HWKEVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQK----------AFPQGRTL 94 + K+ ALE ++ K ++ F L L+ + Sbjct: 1325 KDITLGSGKLFALEKLLNKCKREGNKCLLFTQFIKMLDILEIFLNHLNYTFIRLDGSTKV 1384 Query: 95 DKDPCTIQEWNEGK-IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGV 153 ++ + ++N K I L + S G+NL N+++F+ W+ +Q ++R Sbjct: 1385 EQRQKIVTKFNNDKSIFLFISSTRSGSIGINLT-AANVVIFYDTDWNPSIDKQAMDRC-- 1441 Query: 154 TRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + G + V V+ + + T++E + ++ K + + ++ Sbjct: 1442 ---HRIGQTKDVHVFRFVCEYTVEENIWKKQLQKRKLDTICIS 1481 >gi|118095916|ref|XP_413879.2| PREDICTED: similar to chromodomain helicase DNA binding protein 2 [Gallus gallus] Length = 1837 Score = 92.7 bits (229), Expect = 3e-17, Method: Composition-based stats. Identities = 25/161 (15%), Positives = 59/161 (36%), Gaps = 20/161 (12%) Query: 52 HDEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQKAF---------PQGRTLDK-DPC 99 K+ L+ ++ + +++ L L + G + Sbjct: 792 SSGKLILLDKLLTRLRDRGNRVLIFSQMVRMLDILAEYLTIKHYPFQRLDGSIKGEIRKQ 851 Query: 100 TIQEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 + +N + + G G+NL + +V F W+ + Q R Sbjct: 852 ALDHFNADGSEDFCFLLSTRAGGLGINL-ASADTVVIFDSDWNPQNDLQAQAR-----AH 905 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNAL 198 + G K+ V +Y L+ + T++E +++R + K + L++ + Sbjct: 906 RIGQKKQVNIYRLVTKGTVEEEIIERAKKKMVLDHLVIQRM 946 >gi|310800555|gb|EFQ35448.1| SNF2 family domain-containing protein [Glomerella graminicola M1.001] Length = 1107 Score = 92.7 bits (229), Expect = 3e-17, Method: Composition-based stats. Identities = 30/178 (16%), Positives = 66/178 (37%), Gaps = 19/178 (10%) Query: 41 YYDEEKHWKEVHDEKIKALEVII-EKANAAPIIVAYHFNSDLARLQKAFPQGRTL----- 94 Y + + + KI+ + I+ ++ + IV F S + ++ F + Sbjct: 869 YNPDGQVSHILASAKIRQMMQILHKEVDQHKFIVFSQFTSMMDLVEPFFRKEGFKFTRYD 928 Query: 95 -----DKDPCTIQEW-NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMI 148 D+ ++ N+ +L GLNL ++ +W+ +Q I Sbjct: 929 GSMKNDEREASLHRLRNDKNTRILLCSLKCGSLGLNLT-AATRVIILEPFWNPFVEEQAI 987 Query: 149 ERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN-ALKKETIHV 205 +R+ + V VY L + T++E +L K + + + +KK+ + Sbjct: 988 DRV-----HRLTQTVDVIVYKLTVEKTVEERILALQEKKRLLAETAIEGGMKKDAFKL 1040 >gi|85090821|ref|XP_958601.1| hypothetical protein NCU07556 [Neurospora crassa OR74A] gi|28919976|gb|EAA29365.1| hypothetical protein NCU07556 [Neurospora crassa OR74A] Length = 1893 Score = 92.7 bits (229), Expect = 3e-17, Method: Composition-based stats. Identities = 28/121 (23%), Positives = 52/121 (42%), Gaps = 8/121 (6%) Query: 78 NSDLARLQKAFPQGRTLDKDPCTI-QEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFF 135 + L + G I ++N + +L + G GLNL G + ++F Sbjct: 1691 KTMLPSVSHLRLDGSVDPTRRQDIVNKFNSDPSYDVLLLTTSVGGLGLNLT-GADTVIFV 1749 Query: 136 SLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 W+ ++ Q ++R + G K+ V VY LI + T++E +L R K + ++ Sbjct: 1750 EHDWNPQKDLQAMDR-----AHRIGQKKVVNVYRLITRGTLEEKILSLQRFKIDVASTVV 1804 Query: 196 N 196 N Sbjct: 1805 N 1805 >gi|326471073|gb|EGD95082.1| SNF2 family helicase/ATPase [Trichophyton tonsurans CBS 112818] Length = 1050 Score = 92.7 bits (229), Expect = 3e-17, Method: Composition-based stats. Identities = 29/158 (18%), Positives = 58/158 (36%), Gaps = 18/158 (11%) Query: 52 HDEKIKALEVIIEKANAA-PIIVAYHFNSDLARLQKAFPQG-----------RTLDKDPC 99 KI+ L ++++ + IV F S L +++ G R ++ Sbjct: 808 TSAKIRHLMRVLKRESGQFKFIVFSVFTSMLDKIEPFLKNGGIGYARYDGGMRNDLREAS 867 Query: 100 TIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQA 159 + N +L + GLNL + +V +W+ +Q I+R+ + Sbjct: 868 LNRLRNSSGTRVLLCSLRAGSLGLNLT-AASRVVILEPFWNPFVEEQAIDRV-----HRL 921 Query: 160 GFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 V VY L + T++E +L+ K + + Sbjct: 922 NQTIDVKVYKLTIKGTVEERILELQERKRELAKSTIEG 959 >gi|323138387|ref|ZP_08073457.1| SNF2-related protein [Methylocystis sp. ATCC 49242] gi|322396334|gb|EFX98865.1| SNF2-related protein [Methylocystis sp. ATCC 49242] Length = 828 Score = 92.7 bits (229), Expect = 3e-17, Method: Composition-based stats. Identities = 37/183 (20%), Positives = 76/183 (41%), Gaps = 18/183 (9%) Query: 26 ASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKAL-EVIIEKANAAPIIVAYHFNSDLARL 84 + ++ ++++ + Y +++ V +++ AL E + + A + V + + Sbjct: 503 LTCALQNMRMSCNSTYLLDQQTDHGVKADELAALFEDLFAEPEAKAV-VFSQWTRTHDII 561 Query: 85 QKAFP----------QGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVF 134 + G DK P ++ + + +F + GLNLQ+ + LV Sbjct: 562 IRRLEMRKLGYVSFHGGVPSDKRPELVERFRDDPACRVFLSTDAGSTGLNLQH-ASTLVN 620 Query: 135 FSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 L W+ +Q I RI + G R V V +A+ TI+E +L L K ++ + Sbjct: 621 MDLPWNPAILEQRIARI-----HRMGQIRPVRVINFVAKGTIEEGMLSVLAFKRSLSAGI 675 Query: 195 LNA 197 L+ Sbjct: 676 LDG 678 >gi|289618531|emb|CBI55255.1| unnamed protein product [Sordaria macrospora] Length = 1872 Score = 92.7 bits (229), Expect = 3e-17, Method: Composition-based stats. Identities = 28/121 (23%), Positives = 51/121 (42%), Gaps = 8/121 (6%) Query: 78 NSDLARLQKAFPQGRTLDKDPCTI-QEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFF 135 L + G I ++N + +L + G GLNL G + ++F Sbjct: 1670 KKMLPSVSHLRLDGSVDPTRRQDIVNKFNSDPSYDVLLLTTSVGGLGLNLT-GADTVIFV 1728 Query: 136 SLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 W+ ++ Q ++R + G K+ V VY LI + T++E +L R K + ++ Sbjct: 1729 EHDWNPQKDLQAMDR-----AHRIGQKKVVNVYRLITRGTLEEKILSLQRFKIDVASTVV 1783 Query: 196 N 196 N Sbjct: 1784 N 1784 >gi|58270542|ref|XP_572427.1| chromosome organization and biogenesis -related protein [Cryptococcus neoformans var. neoformans JEC21] gi|134118014|ref|XP_772388.1| hypothetical protein CNBL2540 [Cryptococcus neoformans var. neoformans B-3501A] gi|50255001|gb|EAL17741.1| hypothetical protein CNBL2540 [Cryptococcus neoformans var. neoformans B-3501A] gi|57228685|gb|AAW45120.1| chromosome organization and biogenesis -related protein, putative [Cryptococcus neoformans var. neoformans JEC21] Length = 939 Score = 92.7 bits (229), Expect = 3e-17, Method: Composition-based stats. Identities = 33/141 (23%), Positives = 61/141 (43%), Gaps = 17/141 (12%) Query: 65 KANAAPIIVAYHFNSDLARLQKAF---------PQGRTL-DKDPCTIQEWNEG-KIPLLF 113 KA +++ F L L+ A G+T D+ + E+N+ I + Sbjct: 765 KAEGKRMLLFSQFVMILDILEGALNHLGIRYTRLDGQTKTDERQGLVDEFNDDTDITVFL 824 Query: 114 AHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQ 173 + G G+NL +++V + ++ +R R + G +R V V LI + Sbjct: 825 LSTKAGGVGINLT-AASVVVIYDQDFNPH-----NDRQAADRAYRIGQERKVEVIKLITK 878 Query: 174 NTIDELVLQRLRTKSTIQDLL 194 N+IDE +L+ TK + D++ Sbjct: 879 NSIDEDMLEIGLTKLQLDDMV 899 >gi|255720394|ref|XP_002556477.1| KLTH0H14300p [Lachancea thermotolerans] gi|238942443|emb|CAR30615.1| KLTH0H14300p [Lachancea thermotolerans] Length = 1037 Score = 92.7 bits (229), Expect = 3e-17, Method: Composition-based stats. Identities = 31/185 (16%), Positives = 66/185 (35%), Gaps = 29/185 (15%) Query: 34 QLANGAVYYDEEKHWKEVHDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQK----- 86 Q N Y D ++ K++ ++ +++ + ++ L L++ Sbjct: 607 QRQNEDSYGDPKR------SGKMQVVKQLLKLWHSQGHKTLLFTQSRQMLDILERFISYK 660 Query: 87 ----------AFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFS 136 ++ + +N G + G G+NL G N ++ F Sbjct: 661 DPELEELTYLRMDGTTSIGARQALVDSFNNGSYDVFLLTTRVGGLGVNLT-GANRIIIFD 719 Query: 137 LWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 W+ Q ER + G +R V +Y L+ +I+E + R K + + +L Sbjct: 720 PDWNPSTDMQARERAW-----RIGQRREVTIYRLMIAGSIEEKIYHRQIFKQFLTNKILT 774 Query: 197 ALKKE 201 K++ Sbjct: 775 DPKQK 779 >gi|42523166|ref|NP_968546.1| helicase/SNF2 family protein [Bdellovibrio bacteriovorus HD100] gi|39575371|emb|CAE79539.1| putative helicase/SNF2 family domain protein [Bdellovibrio bacteriovorus HD100] Length = 1330 Score = 92.7 bits (229), Expect = 3e-17, Method: Composition-based stats. Identities = 37/213 (17%), Positives = 78/213 (36%), Gaps = 22/213 (10%) Query: 3 QYHKFQRELYCDLQGENIEAFNSASKTVKCLQLAN--GAVYYDEEKHWKEVHDEKIKALE 60 Y++ ++ + GE+ + ++ Q + GA+ + + + + +L+ Sbjct: 1106 AYNQRIQDTIRE-AGESQSQLQMLTALLRLRQACSDPGALPEVKYEKTPPKLEALMDSLQ 1164 Query: 61 VIIEKANAAPIIVAYHFNSDLARLQKAFPQGRT----------LDKDPCTIQEWNEGKI- 109 IIE +V F L R +K + ++++NE K Sbjct: 1165 EIIES--GESALVFTQFLQTLERTEKLLKAVGIPVFVLHGAIPTKQRQKILKDFNETKGG 1222 Query: 110 PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYY 169 +L + G GLNL + + WW+ Q +R + G ++AV V+ Sbjct: 1223 AVLVMTLKTGGVGLNLTK-ASYVFHLEPWWNPSVENQATDR-----AHRLGQRKAVQVFR 1276 Query: 170 LIAQNTIDELVLQRLRTKSTIQDLLLNALKKET 202 I +++E + K+ L + + T Sbjct: 1277 YIMHESLEEKMELLKERKNRKFQSLFSETEAST 1309 >gi|302663877|ref|XP_003023576.1| hypothetical protein TRV_02323 [Trichophyton verrucosum HKI 0517] gi|291187579|gb|EFE42958.1| hypothetical protein TRV_02323 [Trichophyton verrucosum HKI 0517] Length = 1054 Score = 92.7 bits (229), Expect = 3e-17, Method: Composition-based stats. Identities = 29/158 (18%), Positives = 58/158 (36%), Gaps = 18/158 (11%) Query: 52 HDEKIKALEVIIEKANAA-PIIVAYHFNSDLARLQKAFPQG-----------RTLDKDPC 99 KI+ L ++++ + IV F S L +++ G R ++ Sbjct: 812 TSAKIRHLMRVLKRESGQFKFIVFSVFTSMLDKIEPFLKNGGIGYARYDGGMRNDLREAS 871 Query: 100 TIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQA 159 + N +L + GLNL + +V +W+ +Q I+R+ + Sbjct: 872 LNRLRNSSGTRVLLCSLRAGSLGLNLT-AASRVVILEPFWNPFVEEQAIDRV-----HRL 925 Query: 160 GFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 V VY L + T++E +L+ K + + Sbjct: 926 NQTVDVKVYKLTIKGTVEERILELQERKRELAKSTIEG 963 >gi|225560949|gb|EEH09230.1| RING-13 finger domain-containing protein [Ajellomyces capsulatus G186AR] Length = 1205 Score = 92.7 bits (229), Expect = 3e-17, Method: Composition-based stats. Identities = 34/220 (15%), Positives = 77/220 (35%), Gaps = 39/220 (17%) Query: 5 HKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVI-- 62 +R+ L+ + + + ++ L +W V KI+ I Sbjct: 970 KAVERKSLPQLKKNAARSVEAKREYMRYL-----------TDNW--VTSAKIEKTMEILR 1016 Query: 63 -----IEKANAAPI--IVAYHFNSDLARLQKAFPQ-----------GRTLDKDPCTIQEW 104 I + + P IV F S L LQ + + ++ ++ Sbjct: 1017 DIQSRIPEGDDKPEKTIVFSQFTSLLDLLQVPIEREGWGYCRYDGSMQPSHRNEAVLRFS 1076 Query: 105 NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA 164 + ++ + GLNL + ++ +W+ +Q I+R + G R Sbjct: 1077 DSQNHTIMLISLKAGNSGLNL-VAASQVIILDPFWNPYLEEQAIDR-----AHRIGQMRP 1130 Query: 165 VFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIH 204 V V+ ++ T+++ +L+ K + + L+ ++I Sbjct: 1131 VMVHRILVHKTVEDRILELQDRKRALIEGALDETASKSIG 1170 >gi|156085062|ref|XP_001610014.1| SNF2 domain-containing protein / helicase domain-containing protein [Babesia bovis] gi|154797266|gb|EDO06446.1| SNF2 domain-containing protein / helicase domain-containing protein [Babesia bovis] Length = 829 Score = 92.7 bits (229), Expect = 3e-17, Method: Composition-based stats. Identities = 33/159 (20%), Positives = 61/159 (38%), Gaps = 21/159 (13%) Query: 53 DEKIKALEVIIE--KANAAPIIVAYHFNSDLARL------------QKAFPQGRTLDKDP 98 K+K IIE +AN +++ L + ++ K Sbjct: 474 STKLKVAMDIIEKWEANGDKVLIFTQTIQMLDIIHDTLAKHYGQCRMARIDGEVSIKKRA 533 Query: 99 CTIQEWNEGK-IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 ++ ++ + + LL G GLNL +L+ F W+ Q ER Sbjct: 534 KLLESFHSDENMFLLLLTTRVGGVGLNLTCANRVLI-FDPDWNPMTDSQARER-----SY 587 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + G R V +Y LI+ +T++E + R K + + +L+ Sbjct: 588 RIGQNRDVVIYRLISAHTVEEKIYHRQIYKFYMSEKILS 626 >gi|46137507|ref|XP_390445.1| hypothetical protein FG10269.1 [Gibberella zeae PH-1] Length = 1114 Score = 92.7 bits (229), Expect = 3e-17, Method: Composition-based stats. Identities = 40/225 (17%), Positives = 84/225 (37%), Gaps = 43/225 (19%) Query: 6 KFQRELYCDLQGENIEAFNSAS--------KTVKCLQLAN-------------GAVYYDE 44 + Q + Y + ++I+A N A +QL G Y + Sbjct: 418 EMQVKWYQKILEKDIDAVNGAGGKRESKTRLLNIVMQLRKCCNHPYLFEGAEPGPPYTTD 477 Query: 45 EKHWKEVHDEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQK----------AFPQGR 92 E + K+ L+ ++++ + +++ + L L+ G Sbjct: 478 EHLV--YNAGKMAVLDKLLKRLQKQGSRVLIFSQMSRLLDILEDYCVFREYKYCRIDGGT 535 Query: 93 TLDKDPCTIQEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 + I E+N+ + + + G G+NL +I+V + W+ + Q ++R Sbjct: 536 AHEDRIAAIDEYNKPGSEKFVFLLTTRAGGLGINLTT-ADIVVLYDSDWNPQADLQAMDR 594 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 + G + V VY + +N I+E VL+R K + L++ Sbjct: 595 -----AHRIGQTKQVVVYRFVTENAIEEKVLERAAQKLRLDQLVI 634 >gi|328779113|ref|XP_392959.4| PREDICTED: Rad54 protein isoform 1 [Apis mellifera] Length = 741 Score = 92.7 bits (229), Expect = 3e-17, Method: Composition-based stats. Identities = 31/161 (19%), Positives = 57/161 (35%), Gaps = 24/161 (14%) Query: 56 IKALEVIIEKANAAPIIVAYHFNSDLARLQK----------AFPQGRTLDKDPCTIQEWN 105 + L I+ I++ ++ L +K T+ K ++ +N Sbjct: 507 LDCLLASIKTTTNDKIVLVSNYTQTLDLFEKLCYKRCYNYVRLDGTMTIKKRSKVVERFN 566 Query: 106 EGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKR 163 + + + G GLNL G N LV F W+ Q + R+ + G K+ Sbjct: 567 DSNSNDFIFMLSSKAGGCGLNL-IGANRLVMFDPDWNPANDDQAMARVW-----RDGQKK 620 Query: 164 AVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIH 204 F TI+E + QR K + +++ + H Sbjct: 621 PCFT------GTIEEKIFQRQAHKKALSSTVVDQEEDVARH 655 >gi|210075373|ref|XP_501321.2| YALI0C01243p [Yarrowia lipolytica] gi|199425214|emb|CAG81616.2| YALI0C01243p [Yarrowia lipolytica] Length = 1235 Score = 92.7 bits (229), Expect = 3e-17, Method: Composition-based stats. Identities = 43/230 (18%), Positives = 85/230 (36%), Gaps = 37/230 (16%) Query: 1 MKQYHKFQRELYCDLQGEN----IEAFNSASKTVKCLQL---ANGA-VYYDEEK--HWKE 50 +K Y + + + ++ + K +QL N VY + E + Sbjct: 696 LKMYQQMLKYNALYVGDDSGAAGVNKSGVKGLNNKIMQLRKICNHPYVYEEVETLLNPSH 755 Query: 51 VHDE-------KIKALEVIIEK--ANAAPIIVAYHFNSD---------LARLQKAFPQGR 92 +++ K + L+ I+ K A +++ + L LQ G Sbjct: 756 GNNDLLWRSAGKFELLDRILPKFKARDHRVLMFFQMTQIMDIMEDYLRLRGLQYLRLDGN 815 Query: 93 TL-DKDPCTIQEWNEGKIPLL--FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIE 149 T D ++ +N P + G GLNLQ + ++ + W+ + Q Sbjct: 816 TKADDRSEMLKLFNAPDSPYFCFLLSTRAGGLGLNLQT-ADTVIIYDTDWNPHQDLQA-- 872 Query: 150 RIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 R + G + V + LI +++++E++LQR K I ++ A K Sbjct: 873 ---QDRAHRIGQTKEVRILRLITEDSVEEVILQRAHAKLEIDGKVIQAGK 919 >gi|315043318|ref|XP_003171035.1| DNA repair and recombination protein RAD54 [Arthroderma gypseum CBS 118893] gi|311344824|gb|EFR04027.1| DNA repair and recombination protein RAD54 [Arthroderma gypseum CBS 118893] Length = 922 Score = 92.7 bits (229), Expect = 3e-17, Method: Composition-based stats. Identities = 27/104 (25%), Positives = 45/104 (43%), Gaps = 9/104 (8%) Query: 96 KDPCTIQEWNEG---KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIG 152 K + ++N + G GLNL G + LV F + W+ Q + RI Sbjct: 647 KRQALVDDFNRSPPSSCFAFLLSAKAGGTGLNL-IGASRLVLFDVDWNPATDIQAMARI- 704 Query: 153 VTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + G KR +Y L+ + I+E + QR TK + D +++ Sbjct: 705 ----HRDGQKRHCHIYRLLLKGGIEEKIWQRQVTKLGLADSVMD 744 >gi|308807621|ref|XP_003081121.1| DNA-dependent ATPase, stimulates strand exchange by modifying the topology of double-stranded DNA; i (ISS) [Ostreococcus tauri] gi|116059583|emb|CAL55290.1| DNA-dependent ATPase, stimulates strand exchange by modifying the topology of double-stranded DNA; i (ISS) [Ostreococcus tauri] Length = 730 Score = 92.7 bits (229), Expect = 3e-17, Method: Composition-based stats. Identities = 35/207 (16%), Positives = 81/207 (39%), Gaps = 31/207 (14%) Query: 8 QRELYCDLQGENIE-AFNSASKTVKCLQLANGAVYYD---EEKHWKEVHDEKIKALEVII 63 ++EL +++ + I A + + + AV D K L+ ++ Sbjct: 429 EKELDVEVESDAIARATTTETSVDELK-----AVMADALPSGYGGGIDGSGKFTVLQRML 483 Query: 64 EKANAAP-----IIVAYHFNSDL---ARLQK-------AFPQGRTLDKDPCTIQEWNEGK 108 E +++ +++ L ++ K +D ++++N G Sbjct: 484 EALKDRGDCLERVVIVSGYSASLASADKICKKLDLPTSRLDGTVPVDLRTSIVKDFNNGD 543 Query: 109 I-PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFV 167 ++ + G GLNL G N L+ + W+ +Q + R+ + G ++ V + Sbjct: 544 GGQVMLLSVVAGGAGLNL-VGANRLILMDVSWNPAHDRQAMGRVW-----RDGQRKPVTI 597 Query: 168 YYLIAQNTIDELVLQRLRTKSTIQDLL 194 Y LI T+++ V +R K +++ + Sbjct: 598 YRLITSGTVEQKVFERQLGKEVLKNTV 624 >gi|47221989|emb|CAG08244.1| unnamed protein product [Tetraodon nigroviridis] Length = 965 Score = 92.7 bits (229), Expect = 3e-17, Method: Composition-based stats. Identities = 31/160 (19%), Positives = 59/160 (36%), Gaps = 18/160 (11%) Query: 53 DEKIKALEVIIEKANAAPIIVAYHFNSDLAR---------LQKAFPQGRTLDKDPCT-IQ 102 + L++I EK + ++ + S L L+ G K ++ Sbjct: 796 SAIVSELKMIREKYSDQKSVIVSQWTSMLRIVAVHLRRIGLRYGIIDGTVNPKQRMDLVE 855 Query: 103 EWNEGKI--PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 E+N ++ + G GLNL GGN L + W+ Q +RI + G Sbjct: 856 EFNTNAKGPQVMLVSLCAGGVGLNL-IGGNHLFLIDMHWNPALEDQACDRI-----YRVG 909 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKK 200 + V ++ + T++E + K + +L+ K Sbjct: 910 QTKDVTIHRFECEGTVEEKISTLQVKKKELAQNVLSGTGK 949 >gi|320591351|gb|EFX03790.1| snf2 family helicase [Grosmannia clavigera kw1407] Length = 1138 Score = 92.7 bits (229), Expect = 3e-17, Method: Composition-based stats. Identities = 45/234 (19%), Positives = 86/234 (36%), Gaps = 46/234 (19%) Query: 1 MKQY---HKFQRELYCDLQGENIEAFNSAS--------KTVKCLQLAN------------ 37 M Y Q + Y + ++I+A N A +QL Sbjct: 410 MNVYVGMSDMQVKWYQKILEKDIDAVNGAGGKRESKTRLLNIVMQLRKCCNHPYLFEGAE 469 Query: 38 -GAVYYDEEKHWKEVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARL---------Q 85 G Y +E + K+ L+ ++++ + +++ + L L Q Sbjct: 470 PGPPYTTDEHLV--YNAGKMAVLDRLLKRMSEQGSRVLIFSQMSRLLDILEDYCVFRGYQ 527 Query: 86 KAFPQGRTLDKDP-CTIQEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLE 142 G T +D I E+N+ + + + G G+NL +I+V + W+ + Sbjct: 528 YCRIDGSTAHEDRIAAIDEYNKPGSEKFVFLLTTRAGGLGINLTT-ADIVVLYDSDWNPQ 586 Query: 143 EHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 Q ++R + G + V VY + N I+E VL+R K + L++ Sbjct: 587 ADLQAMDR-----AHRIGQTKQVVVYRFVTDNAIEEKVLERAAQKLRLDQLVIQ 635 >gi|261198361|ref|XP_002625582.1| RSC complex subunit [Ajellomyces dermatitidis SLH14081] gi|239594734|gb|EEQ77315.1| RSC complex subunit [Ajellomyces dermatitidis SLH14081] Length = 1468 Score = 92.7 bits (229), Expect = 3e-17, Method: Composition-based stats. Identities = 39/225 (17%), Positives = 76/225 (33%), Gaps = 33/225 (14%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQL---ANGA----VYYDEEKHWKEVHD- 53 K Y + + + +QL N DE + +D Sbjct: 825 KLYKQLATHNKLVVSDGKGGKTGVRGLSNMLMQLRKLCNHPFVFESVEDEMNPGRATNDL 884 Query: 54 -----EKIKALEVIIEK--ANAAPIIVAYHFNSD---------LARLQKAFPQGRTLDKD 97 K + L+ I+ K A+ +++ + L ++ G T D Sbjct: 885 IWRTAGKFELLDRILPKFKASGHRVLMFFQMTQIMNIMEDFLRLRGMKYLRLDGSTKSDD 944 Query: 98 PCTI-QEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 + +E+N + G GLNLQ + ++ + W+ + Q Sbjct: 945 RSDLLKEFNAPGSDYFCFLLSTRAGGLGLNLQT-ADTVIIYDSDWNPHQDLQA-----QD 998 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 R + G K V + LI N+++E +L+ + K + ++ A K Sbjct: 999 RAHRIGQKNEVRILRLITSNSVEERILEAAQFKLDMDGKVIQAGK 1043 >gi|323347520|gb|EGA81788.1| Rad5p [Saccharomyces cerevisiae Lalvin QA23] Length = 1169 Score = 92.7 bits (229), Expect = 3e-17, Method: Composition-based stats. Identities = 30/159 (18%), Positives = 62/159 (38%), Gaps = 23/159 (14%) Query: 53 DEKIKALEVIIEKANAAPIIVAYHFNSDLARLQK--------------AFPQGRTLDKDP 98 +K L+++ + + +++ F++ L L+K F +L + Sbjct: 997 TALLKELQLLQDSSAGEQVVIFSQFSTYLDILEKELTHTFSKDVAKIYKFDGRLSLKERT 1056 Query: 99 CTIQEWNEGK---IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTR 155 + ++ +L + G GLNL + + WW Q I+R+ Sbjct: 1057 SVLADFAVKDYSRQKILLLSLKAGGVGLNLTCASHAYMM-DPWWSPSMEDQAIDRL---- 1111 Query: 156 QRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 + G +V V I Q++I+E +L+ K TI + + Sbjct: 1112 -HRIGQTNSVKVMRFIIQDSIEEKMLRIQEKKRTIGEAM 1149 >gi|299115201|emb|CBN74032.1| Putative ATP-dependent helicase YFR038W [Ectocarpus siliculosus] Length = 896 Score = 92.7 bits (229), Expect = 3e-17, Method: Composition-based stats. Identities = 23/143 (16%), Positives = 53/143 (37%), Gaps = 17/143 (11%) Query: 66 ANAAPIIVAYHFNSDLARLQKAF---------PQGRT--LDKDPCTIQEWNEGKIPLLFA 114 A +++ S L L+ G T LD+ + + K + Sbjct: 593 AGGHKVLIFSQMTSLLDVLEDYLRHRGWEFHRIDGSTDVLDRQRQIEEFNSNPKFFVFLL 652 Query: 115 HPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQN 174 + G G+NL + + F W+ + Q + R + G ++ V VY L+ Sbjct: 653 STRAGGLGINL-CAADTCILFDSDWNPHQDSQAMARC-----HRIGQQKPVMVYRLLTTG 706 Query: 175 TIDELVLQRLRTKSTIQDLLLNA 197 +++ ++ + +K ++ + + Sbjct: 707 SVEIEMMAKQISKKKLERVAVQG 729 >gi|259148021|emb|CAY81270.1| Rad5p [Saccharomyces cerevisiae EC1118] Length = 1169 Score = 92.7 bits (229), Expect = 3e-17, Method: Composition-based stats. Identities = 30/159 (18%), Positives = 62/159 (38%), Gaps = 23/159 (14%) Query: 53 DEKIKALEVIIEKANAAPIIVAYHFNSDLARLQK--------------AFPQGRTLDKDP 98 +K L+++ + + +++ F++ L L+K F +L + Sbjct: 997 TALLKELQLLQDSSAGEQVVIFSQFSTYLDILEKELTHTFSKDVAKIYKFDGRLSLKERT 1056 Query: 99 CTIQEWNEGK---IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTR 155 + ++ +L + G GLNL + + WW Q I+R+ Sbjct: 1057 SVLADFAVKDYSRQKILLLSLKAGGVGLNLTCASHAYMM-DPWWSPSMEDQAIDRL---- 1111 Query: 156 QRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 + G +V V I Q++I+E +L+ K TI + + Sbjct: 1112 -HRIGQTNSVKVMRFIIQDSIEEKMLRIQEKKRTIGEAM 1149 >gi|256269159|gb|EEU04491.1| Rad5p [Saccharomyces cerevisiae JAY291] Length = 1170 Score = 92.7 bits (229), Expect = 3e-17, Method: Composition-based stats. Identities = 30/159 (18%), Positives = 62/159 (38%), Gaps = 23/159 (14%) Query: 53 DEKIKALEVIIEKANAAPIIVAYHFNSDLARLQK--------------AFPQGRTLDKDP 98 +K L+++ + + +++ F++ L L+K F +L + Sbjct: 998 TALLKELQLLQDSSAGEQVVIFSQFSTYLDILEKELTHTFSKDVAKIYKFDGRLSLKERT 1057 Query: 99 CTIQEWNEGK---IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTR 155 + ++ +L + G GLNL + + WW Q I+R+ Sbjct: 1058 SVLADFAVKDYSRQKILLLSLKAGGVGLNLTCASHAYMM-DPWWSPSMEDQAIDRL---- 1112 Query: 156 QRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 + G +V V I Q++I+E +L+ K TI + + Sbjct: 1113 -HRIGQTNSVKVMRFIIQDSIEEKMLRIQEKKRTIGEAM 1150 >gi|238484253|ref|XP_002373365.1| dsDNA-dependent ATPase (Rad54b), putative [Aspergillus flavus NRRL3357] gi|220701415|gb|EED57753.1| dsDNA-dependent ATPase (Rad54b), putative [Aspergillus flavus NRRL3357] Length = 885 Score = 92.7 bits (229), Expect = 3e-17, Method: Composition-based stats. Identities = 31/167 (18%), Positives = 65/167 (38%), Gaps = 22/167 (13%) Query: 46 KHWKEVHDEK---IKALEVIIEKANAAPIIVAYHFNSDLARLQK----------AFPQGR 92 +H+ K + L I+ + + +++ ++ S L L Sbjct: 534 RHFSPSSSAKIRVLDQLLHILHTSTSEKVVLVSNYTSTLNLLATLLTSLSLPFLRLDGST 593 Query: 93 TLDKDPCTIQEWNE---GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIE 149 K ++++N + + G GLNL G + L+ F + W+ Q + Sbjct: 594 PAQKRQSLVEDFNRFPTNRCFAFLLSAKAGGTGLNL-IGASRLILFDVDWNPATDIQAMA 652 Query: 150 RIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 RI + G KR +Y ++ + +++E + QR TK + D ++ Sbjct: 653 RI-----HRDGQKRHCRIYRILLKGSLEEKIWQRQVTKLGLADSVME 694 >gi|332025027|gb|EGI65214.1| Transcription termination factor 2 [Acromyrmex echinatior] Length = 916 Score = 92.7 bits (229), Expect = 3e-17, Method: Composition-based stats. Identities = 40/174 (22%), Positives = 68/174 (39%), Gaps = 20/174 (11%) Query: 44 EEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFP--QGRTLDK----- 96 ++ + ++ I++K N IIV + S L + P +G T K Sbjct: 737 DDDRISSKMKVLLNIVKQILQKGNDKLIIV-SQWTSLLEVIASHLPSIKGATFSKFTGNV 795 Query: 97 ----DPCTIQEWNEGKI--PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 ++ +N +L + G GLNL GGN L+ F + W+ + Q +R Sbjct: 796 PIKDRQGIMESFNSRNFGPRILLLSLTAGGVGLNL-IGGNHLLLFDIHWNPQLETQAQDR 854 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIH 204 I + G + V+VY I NTI+E + K I +L+ + Sbjct: 855 I-----YRFGQTKNVYVYKFICVNTIEERIKALQERKLQIAKNVLSGTTSRVVG 903 >gi|310795289|gb|EFQ30750.1| SNF2 family domain-containing protein [Glomerella graminicola M1.001] Length = 903 Score = 92.7 bits (229), Expect = 3e-17, Method: Composition-based stats. Identities = 34/152 (22%), Positives = 59/152 (38%), Gaps = 20/152 (13%) Query: 53 DEKIKALEVIIEKANAAP---IIVAYHFNSDLARLQKAFPQGR----------TLDKDPC 99 K +AL I++ P +I+ + S L +Q + T K Sbjct: 731 SSKTEALLKILQATTKDPKSKVIIFSQWTSFLTIIQNQLVEAGYKFARIDGSMTASKRDA 790 Query: 100 TIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQ 158 I + + ++ A A C GLNL + ++ WW Q ++R+ + Sbjct: 791 AIHALDHDPDTRVMLASLAVCSVGLNL-VAADTVILADSWWAPAIEDQAVDRV-----HR 844 Query: 159 AGFKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 G KR V+ L+ + T++E VL K T+ Sbjct: 845 LGQKRPTTVWRLVMEGTVEERVLDIQHEKRTL 876 >gi|26333481|dbj|BAC30458.1| unnamed protein product [Mus musculus] Length = 278 Score = 92.7 bits (229), Expect = 3e-17, Method: Composition-based stats. Identities = 26/161 (16%), Positives = 63/161 (39%), Gaps = 20/161 (12%) Query: 50 EVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQ---------KAFPQGRTLDKDP 98 + K+ L+ ++ K + +++ L L+ G+T + Sbjct: 39 VTNSGKMVVLDKLLPKLKEQGSRVLIFSQMTRVLDILEDYCMWRNYEYCRLDGQTPHDER 98 Query: 99 CT-IQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTR 155 I +NE + + G G+NL ++++ + W+ + Q ++R Sbjct: 99 QDSINAYNEPNSTKFVFMLSTRAGGLGINL-ATADVVILYDSDWNPQVDLQAMDR----- 152 Query: 156 QRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + G + V V+ I NT++E +++R K + +++ Sbjct: 153 AHRIGQTKTVRVFRFITDNTVEERIVERAEMKLRLDSIVIQ 193 >gi|219121950|ref|XP_002181319.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1] gi|217407305|gb|EEC47242.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1] Length = 1431 Score = 92.7 bits (229), Expect = 3e-17, Method: Composition-based stats. Identities = 35/220 (15%), Positives = 84/220 (38%), Gaps = 34/220 (15%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQL--ANGAVYYDEEKHWKEVHD------ 53 K Y L D+ + + + +QL G Y + + Sbjct: 571 KLYRDI---LIRDIDAVQGTSGSRTAILNIVMQLRKCAGHPYLFPGTEDRSLPPLGEHLV 627 Query: 54 ---EKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQ-----KAFPQGRT-----LDKDP 98 K+ L+ ++++ + +++ L ++ + FP R ++ Sbjct: 628 ENCGKMVVLDKLLKRLHERGHRVLLFTQMTRVLDIMEDYLVMRRFPYCRIDGNTSYEQRE 687 Query: 99 CTIQEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 I +N + + + G G+NLQ ++++ + W+ + Q R Sbjct: 688 EYIDAYNAPNSEKFIFLLSTRAGGLGINLQT-ADVVILYDSDWNPQADLQA-----QDRA 741 Query: 157 RQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + G KRAV V+ L+ ++T++E +++R + K + +++ Sbjct: 742 HRIGQKRAVQVFRLVTEHTVEEKIVERAQQKLKLDAMVVQ 781 >gi|330803796|ref|XP_003289888.1| hypothetical protein DICPUDRAFT_154353 [Dictyostelium purpureum] gi|325079999|gb|EGC33573.1| hypothetical protein DICPUDRAFT_154353 [Dictyostelium purpureum] Length = 1851 Score = 92.7 bits (229), Expect = 3e-17, Method: Composition-based stats. Identities = 24/145 (16%), Positives = 53/145 (36%), Gaps = 18/145 (12%) Query: 68 AAPIIVAYHFNSDLARLQKAFPQGRT----------LDKDPCTIQEWNEGKIP--LLFAH 115 +++ L L + + + +N P Sbjct: 1045 GHRVLIFSQMVRMLDILAEYLKGRSFCFQRLDGSMSRENRSKAMDRFNAVDSPDFCFLLS 1104 Query: 116 PASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNT 175 + G G+NL + +V F W+ + Q R + G K V +Y L+++ + Sbjct: 1105 TKAGGLGINLST-ADTVVIFDSDWNPQNDLQAEAR-----AHRIGQKNHVNIYRLVSKKS 1158 Query: 176 IDELVLQRLRTKSTIQDLLLNALKK 200 ++E +L+R + K + L++ ++K Sbjct: 1159 VEEDILERAKQKMVLDHLVIQTMEK 1183 >gi|220679201|emb|CAX12774.1| novel protein similar to H.sapiens ERCC6, excision repair cross-complementing rodent repair deficiency, complementation group 6 (ERCC6) [Danio rerio] Length = 559 Score = 92.7 bits (229), Expect = 3e-17, Method: Composition-based stats. Identities = 30/146 (20%), Positives = 52/146 (35%), Gaps = 17/146 (11%) Query: 67 NAAPIIVAYHFNSDLARLQKAFPQ----------GRTLDKDPCTIQEWN-EGKIPLLFAH 115 +++ L L+ + T+ I ++N I + Sbjct: 390 QGHRVLLFTQSRQMLEILEVFVKENGFSYLKMDGTTTIASRQPLIAQFNQNKDIFVFILT 449 Query: 116 PASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNT 175 G G+NL G N +V + W+ Q ER + G K+ V VY L+ T Sbjct: 450 TRVGGLGVNLT-GANRVVIYDPDWNPSTDTQARERAW-----RIGQKQQVTVYRLLTAGT 503 Query: 176 IDELVLQRLRTKSTIQDLLLNALKKE 201 I+E + R K + + +L K+ Sbjct: 504 IEEKIYHRQIFKQFLTNRVLKDPKQR 529 >gi|190406072|gb|EDV09339.1| DNA repair protein RAD5 [Saccharomyces cerevisiae RM11-1a] Length = 1169 Score = 92.7 bits (229), Expect = 3e-17, Method: Composition-based stats. Identities = 30/159 (18%), Positives = 62/159 (38%), Gaps = 23/159 (14%) Query: 53 DEKIKALEVIIEKANAAPIIVAYHFNSDLARLQK--------------AFPQGRTLDKDP 98 +K L+++ + + +++ F++ L L+K F +L + Sbjct: 997 TALLKELQLLQDSSAGEQVVIFSQFSTYLDILEKELTHTFSKDVAKIYKFDGRLSLKERT 1056 Query: 99 CTIQEWNEGK---IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTR 155 + ++ +L + G GLNL + + WW Q I+R+ Sbjct: 1057 SVLADFAVKDYSRQKILLLSLKAGGVGLNLTCASHAYMM-DPWWSPSMEDQAIDRL---- 1111 Query: 156 QRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 + G +V V I Q++I+E +L+ K TI + + Sbjct: 1112 -HRIGQTNSVKVMRFIIQDSIEEKMLRIQEKKRTIGEAM 1149 >gi|50284977|ref|XP_444917.1| hypothetical protein [Candida glabrata CBS 138] gi|74691178|sp|Q6FY76|RAD5_CANGA RecName: Full=DNA repair protein RAD5 gi|49524219|emb|CAG57810.1| unnamed protein product [Candida glabrata] Length = 1151 Score = 92.7 bits (229), Expect = 3e-17, Method: Composition-based stats. Identities = 30/162 (18%), Positives = 59/162 (36%), Gaps = 27/162 (16%) Query: 54 EKIKAL----EVIIEKANAAPIIVAYHFNSDLARLQ--------------KAFPQGRTLD 95 K+ AL + + + + ++V F+S L L+ F +L Sbjct: 975 AKLNALIRHLQQLQDSSAGEQVVVFSQFSSYLDILESQLNEVYSSNKLKVYKFDGRLSLK 1034 Query: 96 KDPCTIQEWNEGK---IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIG 152 + ++++ +L + G GLNL + WW Q I+RI Sbjct: 1035 ERTAVLEDFKVKDYAVQKVLLLSLKAGGVGLNLTC-ASYAFMMDPWWSPSMEDQAIDRI- 1092 Query: 153 VTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 + G +V V + +I+E +L+ K T+ + + Sbjct: 1093 ----HRIGQTNSVKVIRFVIDGSIEEKMLRIQDRKRTLGEAM 1130 >gi|159464126|ref|XP_001690293.1| predicted protein [Chlamydomonas reinhardtii] gi|158284281|gb|EDP10031.1| predicted protein [Chlamydomonas reinhardtii] Length = 116 Score = 92.7 bits (229), Expect = 3e-17, Method: Composition-based stats. Identities = 28/113 (24%), Positives = 50/113 (44%), Gaps = 11/113 (9%) Query: 79 SDLARLQKAFPQGRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSL 137 RL A ++ +Q +N + KI + S G G+NL G + ++F+ Sbjct: 14 HTYMRLDGATK----PEQRQILMQRFNTDPKIFVFILSTRSGGVGINLT-GADTVIFYDS 68 Query: 138 WWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 W+ Q +R + G R V +Y L++ NTI+E +L++ K + Sbjct: 69 DWNPAMDAQAQDRC-----HRIGQTREVHIYRLVSTNTIEENILRKFNQKRQL 116 >gi|323332493|gb|EGA73901.1| Rad5p [Saccharomyces cerevisiae AWRI796] Length = 1169 Score = 92.7 bits (229), Expect = 3e-17, Method: Composition-based stats. Identities = 30/159 (18%), Positives = 62/159 (38%), Gaps = 23/159 (14%) Query: 53 DEKIKALEVIIEKANAAPIIVAYHFNSDLARLQK--------------AFPQGRTLDKDP 98 +K L+++ + + +++ F++ L L+K F +L + Sbjct: 997 TALLKELQLLQDSSAGEQVVIFSQFSTYLDILEKELTHTFSKDVAKIYKFDGRLSLKERT 1056 Query: 99 CTIQEWNEGK---IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTR 155 + ++ +L + G GLNL + + WW Q I+R+ Sbjct: 1057 SVLADFAVKDYSRQKILLLSLKAGGVGLNLTCASHAYMM-DPWWSPSMEDQAIDRL---- 1111 Query: 156 QRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 + G +V V I Q++I+E +L+ K TI + + Sbjct: 1112 -HRIGQTNSVKVMRFIIQDSIEEKMLRIQEKKRTIGEAM 1149 >gi|224132088|ref|XP_002328182.1| chromatin remodeling complex subunit [Populus trichocarpa] gi|222837697|gb|EEE76062.1| chromatin remodeling complex subunit [Populus trichocarpa] Length = 896 Score = 92.7 bits (229), Expect = 3e-17, Method: Composition-based stats. Identities = 35/160 (21%), Positives = 61/160 (38%), Gaps = 21/160 (13%) Query: 42 YDEEKHWKEVHDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQ----------KAFP 89 D EK+W E KI AL +E + + + I+ + + L LQ Sbjct: 720 IDIEKNWVE--SSKIVALLQELEILRLSGSKSILFSQWTAFLDLLQIPLSRSNISFVRLD 777 Query: 90 QGRTLDKDPCTIQEWNEGK-IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMI 148 + I++++E I +L + G G+NL N V WW+ +Q + Sbjct: 778 GTLNQQQRERVIKQFSEDDSILVLLMSLKAGGVGINLTAASNAFVM-DPWWNPAVEEQAV 836 Query: 149 ERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKS 188 RI + G + V + I + T++E + K Sbjct: 837 MRI-----HRIGQTKRVMIRRFIVKGTVEERMEAVQARKQ 871 >gi|242822858|ref|XP_002487973.1| SNF2 family helicase/ATPase, putative [Talaromyces stipitatus ATCC 10500] gi|218712894|gb|EED12319.1| SNF2 family helicase/ATPase, putative [Talaromyces stipitatus ATCC 10500] Length = 1086 Score = 92.7 bits (229), Expect = 3e-17, Method: Composition-based stats. Identities = 34/163 (20%), Positives = 65/163 (39%), Gaps = 19/163 (11%) Query: 46 KHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFP---------QGRTL 94 K+ + ++ KI L +++K N ++ F + L+ GRT Sbjct: 903 KNQEWMNSGKIDKLCELLKKFKENGDRTLIFSQFTLVMDILEYVLETVNMRFFRLDGRTN 962 Query: 95 DKDPCTI--QEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIG 152 +D I + + IP+ + G G+NL N ++ F ++ +E Q Sbjct: 963 VEDRQAILDAFYEQTDIPVFMLSTKAGGAGINL-ACANKVIIFDSSFNPQEDVQA----- 1016 Query: 153 VTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 R + G R V V L+ + TI+E + +TK + ++ Sbjct: 1017 ENRAHRVGQTREVEVIRLVTKGTIEEQIYALGQTKLALDQRVV 1059 >gi|170033270|ref|XP_001844501.1| chromo domain protein 1 [Culex quinquefasciatus] gi|167873908|gb|EDS37291.1| chromo domain protein 1 [Culex quinquefasciatus] Length = 881 Score = 92.7 bits (229), Expect = 3e-17, Method: Composition-based stats. Identities = 24/159 (15%), Positives = 59/159 (37%), Gaps = 19/159 (11%) Query: 51 VHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFP---------QGRTLDKDPC 99 V K + L+ ++ K + +++ F L ++ G+T D Sbjct: 683 VASGKFRQLDELLPKLKSEGHRVLIFSQFVMMLDIMEHYLKIRKHGFLRLDGQTAVTDRQ 742 Query: 100 TIQEW--NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 + + + I + + G G+NL +++ + ++ R Sbjct: 743 EMIDLYTQDPNIFVFLLSTKAGGLGINLTAADTVIIHD------IDFNPYNDKQAEDRAH 796 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + G + V +Y L+++ TI+E +L + K ++ + Sbjct: 797 RMGQTKPVTIYKLVSEGTIEEGMLMIAQEKLQLEKEVTE 835 >gi|6323060|ref|NP_013132.1| Rad5p [Saccharomyces cerevisiae S288c] gi|417587|sp|P32849|RAD5_YEAST RecName: Full=DNA repair protein RAD5; AltName: Full=Radiation sensitivity protein 5; AltName: Full=Revertibility protein 2 gi|172347|gb|AAA34951.1| RAD5 protein [Saccharomyces cerevisiae] gi|1360348|emb|CAA97556.1| RAD5 [Saccharomyces cerevisiae] gi|285813454|tpg|DAA09350.1| TPA: Rad5p [Saccharomyces cerevisiae S288c] Length = 1169 Score = 92.7 bits (229), Expect = 3e-17, Method: Composition-based stats. Identities = 30/159 (18%), Positives = 62/159 (38%), Gaps = 23/159 (14%) Query: 53 DEKIKALEVIIEKANAAPIIVAYHFNSDLARLQK--------------AFPQGRTLDKDP 98 +K L+++ + + +++ F++ L L+K F +L + Sbjct: 997 TALLKELQLLQDSSAGEQVVIFSQFSTYLDILEKELTHTFSKDVAKIYKFDGRLSLKERT 1056 Query: 99 CTIQEWNEGK---IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTR 155 + ++ +L + G GLNL + + WW Q I+R+ Sbjct: 1057 SVLADFAVKDYSRQKILLLSLKAGGVGLNLTCASHAYMM-DPWWSPSMEDQAIDRL---- 1111 Query: 156 QRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 + G +V V I Q++I+E +L+ K TI + + Sbjct: 1112 -HRIGQTNSVKVMRFIIQDSIEEKMLRIQEKKRTIGEAM 1149 >gi|224111230|ref|XP_002315787.1| chromatin remodeling complex subunit [Populus trichocarpa] gi|222864827|gb|EEF01958.1| chromatin remodeling complex subunit [Populus trichocarpa] Length = 1132 Score = 92.7 bits (229), Expect = 3e-17, Method: Composition-based stats. Identities = 33/189 (17%), Positives = 79/189 (41%), Gaps = 25/189 (13%) Query: 28 KTVKCLQLANGA-VYYDEEKHWKEV----HDEKIKALEVIIEKAN--AAPIIVAYHFNSD 80 T++ + N ++ + W++ K + L+ ++ K + +++ Sbjct: 697 LTMQLRKCCNHPYLFVGDYNMWRKDEIMRASGKFELLDRLLPKLHATDHRVLLFSQMTRL 756 Query: 81 LARL---------QKAFPQGRTL-DKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYG 128 + L + G T ++ ++++N P + + G GLNLQ Sbjct: 757 MDILEIYLQLHDYKYLRLDGSTKTEERGTLLKKFNAPDSPYFMFLLSTRAGGLGLNLQT- 815 Query: 129 GNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKS 188 + ++ F W+ + QQ +R + G K+ V V+ L++ +++E++L+R + K Sbjct: 816 ADTVIIFDSDWNPQMDQQAEDR-----AHRIGQKKEVRVFVLVSVGSVEEVILERAKQKK 870 Query: 189 TIQDLLLNA 197 I ++ A Sbjct: 871 GIDAKVIQA 879 >gi|119592220|gb|EAW71814.1| FLJ20105 protein, isoform CRA_b [Homo sapiens] Length = 1080 Score = 92.7 bits (229), Expect = 3e-17, Method: Composition-based stats. Identities = 36/210 (17%), Positives = 66/210 (31%), Gaps = 28/210 (13%) Query: 3 QYHKFQR-ELYCDLQGENIEAFNSASKTVKCL---QLANGAVYYDEEKHWKEVH----DE 54 Y KF + +L E K +L + Y D + Sbjct: 231 IYRKFVSLDHIKELLMETRSPLAELGVLKKLCDHPRLLSARAYVDHIDQVTDDTLMEESG 290 Query: 55 KIKALEVIIEKA--NAAPIIVAYHFNSDLARLQK-----AFPQGRT-------LDKDPCT 100 K+ L ++++ +V L +++ F R L+++ Sbjct: 291 KMIFLMDLLKRLRDEGHQTLVFSQSRQILNIIERLLKNRHFKTLRIDGTVTHLLEREKRI 350 Query: 101 IQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 + G GL L +V F W+ Q ++R+ + G Sbjct: 351 NLFQQNKDYSVFLLTTQVGGVGLTLT-AATRVVIFDPSWNPATDAQAVDRV-----YRIG 404 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 K V VY LI T++E + +R K ++ Sbjct: 405 QKENVVVYRLITCGTVEEKIYRRQVFKDSL 434 >gi|320164200|gb|EFW41099.1| chromodomain helicase DNA binding protein 2 [Capsaspora owczarzaki ATCC 30864] Length = 1939 Score = 92.3 bits (228), Expect = 3e-17, Method: Composition-based stats. Identities = 34/197 (17%), Positives = 72/197 (36%), Gaps = 24/197 (12%) Query: 16 QGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKA--NAAPIIV 73 G E+ +A+ QL G D+ K+ L+ ++ + +++ Sbjct: 926 SGATNESSGAAAAGG---QLTLGG-QTDDRLARLVKQSGKMVLLDKLLVRLRETGHRVLI 981 Query: 74 AYHFNSDLARLQKAF---------PQGRTL-DKDPCTIQEWN-EGKIPL-LFAHPASCGH 121 L L + G D ++ +N EG + G Sbjct: 982 FSQMVRMLDILAEYMQRRGFGFQRLDGNVRGDLRKQSLDHFNAEGSTDFAFLLSTRAGGL 1041 Query: 122 GLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVL 181 G+NL + ++ F W+ + Q R + G K V +Y +I +N+++E +L Sbjct: 1042 GINL-ATADTVIIFDSDWNPQNDLQAEAR-----AHRIGQKNVVNIYRIITKNSVEEDIL 1095 Query: 182 QRLRTKSTIQDLLLNAL 198 +R + K + +++ + Sbjct: 1096 ERAKKKMILDHVVIQRM 1112 >gi|297833338|ref|XP_002884551.1| predicted protein [Arabidopsis lyrata subsp. lyrata] gi|297330391|gb|EFH60810.1| predicted protein [Arabidopsis lyrata subsp. lyrata] Length = 1130 Score = 92.3 bits (228), Expect = 3e-17, Method: Composition-based stats. Identities = 44/217 (20%), Positives = 90/217 (41%), Gaps = 27/217 (12%) Query: 2 KQYHKFQREL-YCDLQGENIEAFNSASKTVKCLQLAN------GAVYYDEEKHWKEVHDE 54 K Y+K ++ LQ + ++ + + T++ + N G Y +K Sbjct: 683 KVYYKQVTDMGRVGLQTGSGKSKSLQNLTMQLRKCCNHPYLFVGGDYNMWKKPEIVRASG 742 Query: 55 KIKALEVIIEKA--NAAPIIVAYHFNSDLARL---------QKAFPQGRTL-DKDPCTIQ 102 K + L+ ++ K I++ + L + G T D+ ++ Sbjct: 743 KFELLDRLLPKLRKAGHRILLFSQMTRLIDVLEIYLTLNDYKYLRLDGTTKTDQRGLLLK 802 Query: 103 EWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 ++NE P + + G GLNLQ + ++ F W+ + QQ +R + G Sbjct: 803 QFNEPDSPYFMFLLSTRAGGLGLNLQT-ADTVIIFDSDWNPQMDQQAEDR-----AHRIG 856 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 K+ V V+ L++ +I+E++L+R + K I ++ A Sbjct: 857 QKKEVRVFVLVSVGSIEEVILERAKQKMGIDAKVIQA 893 >gi|159130807|gb|EDP55920.1| TBP associated factor (Mot1), putative [Aspergillus fumigatus A1163] Length = 1891 Score = 92.3 bits (228), Expect = 3e-17, Method: Composition-based stats. Identities = 31/161 (19%), Positives = 64/161 (39%), Gaps = 18/161 (11%) Query: 37 NGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDK 96 +GA Y + ++K + I++ ++ + F + Sbjct: 1665 SGASYVSPHRALIF---CQMKEMLDIVQSEVFNKLLPSVQFL--------RLDGSVEATR 1713 Query: 97 DPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTR 155 + +N + +L + G GLNL G + ++F W+ ++ Q ++R Sbjct: 1714 RQDIVNRFNTDPSYDVLLLTTSVGGLGLNLT-GADTVIFVEHDWNPQKDIQAMDR----- 1767 Query: 156 QRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + G K+ V VY LI + T++E +L R K + ++N Sbjct: 1768 AHRIGQKKVVNVYRLITRGTLEEKILNLQRFKIDVASTVVN 1808 >gi|73951133|ref|XP_859090.1| PREDICTED: similar to Chromodomain-helicase-DNA-binding protein 2 (CHD-2) isoform 5 [Canis familiaris] Length = 1822 Score = 92.3 bits (228), Expect = 3e-17, Method: Composition-based stats. Identities = 27/170 (15%), Positives = 62/170 (36%), Gaps = 20/170 (11%) Query: 43 DEEKHWKEVHDEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQKAF---------PQG 91 D K + K+ L+ ++ + +++ L L + G Sbjct: 775 DSFKGRLKYGSGKLILLDKLLTRLRERGNRVLIFSQMVRMLDILAEYLTIKHYPFQRLDG 834 Query: 92 RTLDK-DPCTIQEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMI 148 + + +N + + G G+NL + +V F W+ + Q Sbjct: 835 SIKGEIRKQALDHFNADGSEDFCFLLSTRAGGLGINL-ASADTVVIFDSDWNPQNDLQAQ 893 Query: 149 ERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNAL 198 R + G K+ V +Y L+ + T++E +++R + K + L++ + Sbjct: 894 AR-----AHRIGQKKQVNIYRLVTKGTVEEEIIERAKKKMVLDHLVIQRM 938 >gi|70990968|ref|XP_750333.1| TBP associated factor (Mot1) [Aspergillus fumigatus Af293] gi|66847965|gb|EAL88295.1| TBP associated factor (Mot1), putative [Aspergillus fumigatus Af293] Length = 1891 Score = 92.3 bits (228), Expect = 3e-17, Method: Composition-based stats. Identities = 31/161 (19%), Positives = 64/161 (39%), Gaps = 18/161 (11%) Query: 37 NGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDK 96 +GA Y + ++K + I++ ++ + F + Sbjct: 1665 SGASYVSPHRALIF---CQMKEMLDIVQSEVFNKLLPSVQFL--------RLDGSVEATR 1713 Query: 97 DPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTR 155 + +N + +L + G GLNL G + ++F W+ ++ Q ++R Sbjct: 1714 RQDIVNRFNTDPSYDVLLLTTSVGGLGLNLT-GADTVIFVEHDWNPQKDIQAMDR----- 1767 Query: 156 QRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + G K+ V VY LI + T++E +L R K + ++N Sbjct: 1768 AHRIGQKKVVNVYRLITRGTLEEKILNLQRFKIDVASTVVN 1808 >gi|328696868|ref|XP_001944720.2| PREDICTED: lymphocyte-specific helicase-like [Acyrthosiphon pisum] Length = 713 Score = 92.3 bits (228), Expect = 3e-17, Method: Composition-based stats. Identities = 26/138 (18%), Positives = 52/138 (37%), Gaps = 16/138 (11%) Query: 58 ALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPA 117 L +IE+ ++ + RL ++ N L+ Sbjct: 519 QLLDLIEE-----FLIFRSYK--YTRLDGTMDIA---NRVKAITTFTNHPDCFLMLISTR 568 Query: 118 SCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 + G GLNL + ++ F W+ + Q +R + G + V VY L ++T+D Sbjct: 569 AGGLGLNLT-AADTVIIFDSDWNPQCDLQAQDRC-----HRIGQVKPVVVYRLCTKSTVD 622 Query: 178 ELVLQRLRTKSTIQDLLL 195 E +L K ++ +++ Sbjct: 623 ENILAHAAAKRKLEKIVI 640 >gi|330801436|ref|XP_003288733.1| hypothetical protein DICPUDRAFT_153008 [Dictyostelium purpureum] gi|325081209|gb|EGC34733.1| hypothetical protein DICPUDRAFT_153008 [Dictyostelium purpureum] Length = 1544 Score = 92.3 bits (228), Expect = 3e-17, Method: Composition-based stats. Identities = 28/141 (19%), Positives = 54/141 (38%), Gaps = 18/141 (12%) Query: 67 NAAPIIVAYHFNSDLARLQKAFPQGRTLD-----------KDPCTIQEWN-EGKIPLLFA 114 +++ L ++ T + ++E+N + K+ + Sbjct: 1054 QGDKVLLFCQTRQMLDIVEAYIRNSTTFNYLRMDGTTSVKHRQSLVEEFNLDEKLFIFLL 1113 Query: 115 HPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQN 174 G GLNL G N ++ F W+ Q ER+ + G K++V +Y L+ Sbjct: 1114 TTKVGGLGLNLT-GANRVILFDPDWNPSTDTQARERV-----YRIGQKKSVTIYRLVTLG 1167 Query: 175 TIDELVLQRLRTKSTIQDLLL 195 TI+E + R K + + +L Sbjct: 1168 TIEEKIYHRQIYKQFLTNKIL 1188 >gi|294655844|ref|XP_002770188.1| DEHA2C08294p [Debaryomyces hansenii CBS767] gi|199430649|emb|CAG86104.4| DEHA2C08294p [Debaryomyces hansenii] Length = 1034 Score = 92.3 bits (228), Expect = 3e-17, Method: Composition-based stats. Identities = 43/223 (19%), Positives = 87/223 (39%), Gaps = 38/223 (17%) Query: 6 KFQRELYCDLQGENIEAFNSASK-------TVKCLQL--ANGAVYYDEEKHW-------- 48 QR+ Y + ++I+A N A+K +QL Y E Sbjct: 396 DMQRKWYQKILEKDIDAVNGANKKESKTRLLNIVMQLRKCCNHPYLFEGAEPGPPFTTDE 455 Query: 49 -KEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQ---------KAFPQGRTLDK 96 + +K+ L+ +++K + +++ + L ++ G+T Sbjct: 456 HLVYNSQKMIILDKLLKKFKQEGSRVLIFSQMSRMLDIMEDYCMFRDYEYCRIDGQTDHA 515 Query: 97 DP-CTIQEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGV 153 D I E+NE + + G G+NL +I++ F W+ + Q ++R Sbjct: 516 DRVNAIDEYNEPGSSKFVFLLTTRAGGLGINLTT-ADIVILFDSDWNPQADLQAMDR--- 571 Query: 154 TRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + G + V V+ +++N I+E VL+R K + L++ Sbjct: 572 --AHRIGQTKQVRVFRFVSENAIEEKVLERATQKLRLDQLVIQ 612 >gi|164662775|ref|XP_001732509.1| hypothetical protein MGL_0284 [Malassezia globosa CBS 7966] gi|159106412|gb|EDP45295.1| hypothetical protein MGL_0284 [Malassezia globosa CBS 7966] Length = 1129 Score = 92.3 bits (228), Expect = 3e-17, Method: Composition-based stats. Identities = 31/149 (20%), Positives = 59/149 (39%), Gaps = 17/149 (11%) Query: 67 NAAPIIVAYHFNSDLARLQKAFPQG----RTLD-------KDPCTIQEWNEGKIPLLFAH 115 N ++ + LA++++A R LD ++ + + KI + Sbjct: 972 NPIKSVIFSQWTRMLAKVKEALLHAGIGFRQLDGTMKREHREGAMSEFQQDPKIEVFLVS 1031 Query: 116 PASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNT 175 + G GLNL G +W+ QQ ++RI + G KR + + I Q + Sbjct: 1032 LRAGGFGLNL-VAGCRAYLLDPYWNPAVEQQGLDRI-----HRLGQKRPIVMTKFIMQRS 1085 Query: 176 IDELVLQRLRTKSTIQDLLLNALKKETIH 204 I+E +L+ + K + + + T H Sbjct: 1086 IEEKLLELQKRKLELASQVGRRTDRRTDH 1114 >gi|121702625|ref|XP_001269577.1| TBP associated factor (Mot1), putative [Aspergillus clavatus NRRL 1] gi|119397720|gb|EAW08151.1| TBP associated factor (Mot1), putative [Aspergillus clavatus NRRL 1] Length = 1901 Score = 92.3 bits (228), Expect = 3e-17, Method: Composition-based stats. Identities = 40/211 (18%), Positives = 76/211 (36%), Gaps = 35/211 (16%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLA---------------NGAVYYDEEK 46 KQY++ Q+ Y + I A K L + A Y + Sbjct: 1624 KQYNEVQQ--YLTAKHSQIRDVAHAPKLGALRDLLVDCGIGVDPPSEGDLSSASYVSPHR 1681 Query: 47 HWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWN- 105 ++K + I++ ++ + F K + +N Sbjct: 1682 ALIF---CQMKEMLDIVQSEVFKKLLPSVQFL--------RLDGSVEATKRQDIVNRFNT 1730 Query: 106 EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 + +L + G GLNL G + ++F W+ ++ Q ++R + G K+ V Sbjct: 1731 DPSYDVLLLTTSVGGLGLNLT-GADTVIFVEHDWNPQKDIQAMDR-----AHRIGQKKVV 1784 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 VY LI + T++E +L R K + ++N Sbjct: 1785 NVYRLITRGTLEEKILNLQRFKIDVASTVVN 1815 >gi|326435102|gb|EGD80672.1| acyl-CoA dehydrogenase domain-containing protein [Salpingoeca sp. ATCC 50818] Length = 832 Score = 92.3 bits (228), Expect = 3e-17, Method: Composition-based stats. Identities = 28/160 (17%), Positives = 63/160 (39%), Gaps = 24/160 (15%) Query: 53 DEKIKALEVII--EKANAAPIIVAYHFNSDLARLQKAF---------PQGRTLDKDPCT- 100 K L+ ++ +++ F + L L++ G T ++ Sbjct: 661 SGKFAVLKDLLHKRSEQGDRVLLFSQFTTMLNILERFLTSLGISFLRIDGSTPVEERQDL 720 Query: 101 IQEW-NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQA 159 I ++ N+ I + G G+NL N+++ + ++ +Q +R + Sbjct: 721 IDKFTNDKSIFCFLLSTKAGGLGINLT-AANVVILHDIDFNPYNDKQAEDRC-----HRV 774 Query: 160 GFKRAVFVYYLIAQNTIDELVLQR-----LRTKSTIQDLL 194 G + V V LI++++++E++L+R K Q L Sbjct: 775 GQTKPVHVIRLISKDSVEEVMLKRADLKLQLEKDMTQSTL 814 >gi|158286564|ref|XP_308811.4| AGAP006945-PA [Anopheles gambiae str. PEST] gi|157020528|gb|EAA04280.4| AGAP006945-PA [Anopheles gambiae str. PEST] Length = 871 Score = 92.3 bits (228), Expect = 3e-17, Method: Composition-based stats. Identities = 31/160 (19%), Positives = 66/160 (41%), Gaps = 20/160 (12%) Query: 51 VHDEKIKALEVIIEKANA--APIIVAYHFNSDLARL---------QKAFPQGRTLD-KDP 98 K+ +E ++E A I++ +++ L + + G T Sbjct: 581 TDSAKLGIVEALLEAMLAMQEKIVIVSYYSKTLDMIGGLCDHYNYKYCRLDGSTAGPDRS 640 Query: 99 CTIQEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 + +N +L + G GLNL G + LV + W+ Q + R+ Sbjct: 641 RIVAAFNNPANDSFILLLSAKAGGAGLNL-IGASRLVLYDNDWNPANDLQAMSRVW---- 695 Query: 157 RQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + G ++ VF+Y L+ +I+E + QR +K+++ +++ Sbjct: 696 -RDGQRKPVFIYRLLTAYSIEERIFQRQISKTSLSGTVVD 734 >gi|226289867|gb|EEH45351.1| chromodomain-helicase-DNA-binding protein [Paracoccidioides brasiliensis Pb18] Length = 1348 Score = 92.3 bits (228), Expect = 3e-17, Method: Composition-based stats. Identities = 26/164 (15%), Positives = 63/164 (38%), Gaps = 20/164 (12%) Query: 52 HDEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQKAFPQGRTLDKD----------PC 99 K++ LE+++ K +++ F +L ++ L + Sbjct: 998 ASSKLQLLEMLVPKLQERGHRVLIFSQFLDNLDVIEDFLDGLGLLHRRLDGSMTSLQKQK 1057 Query: 100 TIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 I ++N P S G G+NL + ++ ++ + Q + R Sbjct: 1058 QIDDYNAPDSPYFAFLLSTRSGGVGINL-ATADTVIIMDPDFNPHQDIQALSR-----AH 1111 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 + G ++ V V+ L+ + + +E ++Q + K + +L+ + E Sbjct: 1112 RIGQQKKVLVFQLVTKASAEEKIMQIGKKKLALDQVLIEHMDAE 1155 >gi|115401476|ref|XP_001216326.1| conserved hypothetical protein [Aspergillus terreus NIH2624] gi|114190267|gb|EAU31967.1| conserved hypothetical protein [Aspergillus terreus NIH2624] Length = 966 Score = 92.3 bits (228), Expect = 3e-17, Method: Composition-based stats. Identities = 28/167 (16%), Positives = 69/167 (41%), Gaps = 24/167 (14%) Query: 53 DEKIKALEVIIEK--ANAAPIIVAYHFN-------SDLARLQKAFP---QGRTLDKDPCT 100 K + L ++ + + +I+ F L+ LQ +F R + P Sbjct: 496 SGKFQVLSKLVRRFVSEQKKVIIFSGFEGALDLCEDMLSLLQTSFDPFRYVRLDGQTPSA 555 Query: 101 IQEW------NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 ++ N+ + + + G GLNL + ++F W+ ++ +Q R+ Sbjct: 556 VRNLSTYLFRNDERYLVFLISIRAGGEGLNLTCS-STIIFLDEDWNPQQMKQACSRV--- 611 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 + G + V ++ + ++ T++E + +RL K+ + D + ++ + Sbjct: 612 --HRIGQTKPVEIFRIQSRGTVEEQMARRLEKKAYMADRVTERVRSQ 656 >gi|332024392|gb|EGI64590.1| TATA-binding protein-associated factor 172 [Acromyrmex echinatior] Length = 1888 Score = 92.3 bits (228), Expect = 3e-17, Method: Composition-based stats. Identities = 24/142 (16%), Positives = 54/142 (38%), Gaps = 20/142 (14%) Query: 69 APIIVAYHFNSDLARLQK-------------AFPQGRTLDKDPCTIQEWN-EGKIPLLFA 114 ++ + L +++ + +N + I +L Sbjct: 1673 HRALIFCQLKAMLDIVEEDLLRTHLPTVTYLRLDGSVPAAHRHSVVTRFNADPSIDVLLL 1732 Query: 115 HPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQN 174 G GLNL G + ++F W+ + Q ++R + G K+ V VY LI ++ Sbjct: 1733 TTQVGGLGLNLT-GADTVIFVEHDWNPMKDLQAMDR-----AHRIGQKKVVNVYRLITRS 1786 Query: 175 TIDELVLQRLRTKSTIQDLLLN 196 T++E ++ + K + +++ Sbjct: 1787 TVEEKIMGLQKFKLLTANTIIS 1808 >gi|302308944|ref|NP_986109.2| AFR562Cp [Ashbya gossypii ATCC 10895] gi|299790868|gb|AAS53933.2| AFR562Cp [Ashbya gossypii ATCC 10895] Length = 1445 Score = 92.3 bits (228), Expect = 3e-17, Method: Composition-based stats. Identities = 33/159 (20%), Positives = 62/159 (38%), Gaps = 20/159 (12%) Query: 55 KIKALEVIIEK--ANAAPIIVAYHFNSDLARL---------QKAFPQGRTLDKDPCTI-Q 102 K + LE I+ K A+ +++ + + + + G T D + Sbjct: 884 KFELLEKILPKFKASGHRVLIFFQMTQIMDIMEDFLRFCDMKYLRLDGHTKSDDRTALLN 943 Query: 103 EWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 ++N + G GLNLQ + ++ F W+ + Q R + G Sbjct: 944 KFNAPGSDYFCFLLSTRAGGLGLNLQT-ADTVIIFDTDWNPHQDLQA-----QDRAHRIG 997 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 K V + LI N+++E++L+R K I ++ A K Sbjct: 998 QKNEVRILRLITDNSVEEVILERAHRKLDIDGKVIQAGK 1036 >gi|302920912|ref|XP_003053175.1| hypothetical protein NECHADRAFT_105989 [Nectria haematococca mpVI 77-13-4] gi|256734115|gb|EEU47462.1| hypothetical protein NECHADRAFT_105989 [Nectria haematococca mpVI 77-13-4] Length = 1144 Score = 92.3 bits (228), Expect = 3e-17, Method: Composition-based stats. Identities = 26/165 (15%), Positives = 60/165 (36%), Gaps = 22/165 (13%) Query: 46 KHWKEVHDEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQ-----KAFPQGRTLDKDP 98 K W+ K+ A ++++ N IV + L LQ + + D Sbjct: 966 KTWE--PAAKVTACMDLLKQINETGEKTIVFSQWTLLLDLLQVAMSHEKLEKPERYDGSM 1023 Query: 99 CTIQEW-------NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERI 151 + + ++ + GLNL + ++ +W+ Q ++R Sbjct: 1024 SATHRNIAARNFRDRKDVKVMLVSLRAGNAGLNLT-AASRVIIMDPFWNPYIEMQAVDR- 1081 Query: 152 GVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + G ++ V VY ++ + T+++ ++ K I + L+ Sbjct: 1082 ----AYRIGQQKEVKVYRILTKKTVEDRIVALQNQKKEIVEAALD 1122 >gi|301607520|ref|XP_002933353.1| PREDICTED: chromodomain-helicase-DNA-binding protein 2-like [Xenopus (Silurana) tropicalis] Length = 1809 Score = 92.3 bits (228), Expect = 3e-17, Method: Composition-based stats. Identities = 27/161 (16%), Positives = 60/161 (37%), Gaps = 20/161 (12%) Query: 52 HDEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQKAF---------PQGRTLDK-DPC 99 K+ L+ ++ + +++ L L + G + Sbjct: 791 SSGKLVLLDKLLTRLRERGNRVLIFSQMVRMLDILAEYLAIKHYPFQRLDGSIKGELRKQ 850 Query: 100 TIQEWN-EGKIPL-LFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 + +N EG + G G+NL + +V F W+ + Q R Sbjct: 851 ALDHFNAEGSEDFCFLLSTRAGGLGINL-ASADTVVIFDSDWNPQNDLQAQAR-----AH 904 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNAL 198 + G K+ V +Y L+ + T++E +++R + K + L++ + Sbjct: 905 RIGQKKQVNIYRLVTRGTVEEDIIERAKKKMVLDHLVIQRM 945 >gi|115492543|ref|XP_001210899.1| conserved hypothetical protein [Aspergillus terreus NIH2624] gi|114197759|gb|EAU39459.1| conserved hypothetical protein [Aspergillus terreus NIH2624] Length = 1329 Score = 92.3 bits (228), Expect = 3e-17, Method: Composition-based stats. Identities = 26/113 (23%), Positives = 48/113 (42%), Gaps = 9/113 (7%) Query: 87 AFPQGRTLDKDPCTIQEWN---EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEE 143 K ++++N + + G GLNL G + LV F + W+ Sbjct: 664 RLDGSTPAQKRQSLVEDFNRLPADRSFAFLLSAKAGGTGLNL-IGASRLVLFDVDWNPAT 722 Query: 144 HQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 Q + RI + G KRA +Y ++ + +++E + QR TK + D ++ Sbjct: 723 DIQAMARI-----HRDGQKRACRIYRILLKGSLEEKIWQRQVTKLGLADSVME 770 >gi|66811190|ref|XP_639303.1| SNF2-related domain-containing protein [Dictyostelium discoideum AX4] gi|60467929|gb|EAL65942.1| SNF2-related domain-containing protein [Dictyostelium discoideum AX4] Length = 931 Score = 92.3 bits (228), Expect = 3e-17, Method: Composition-based stats. Identities = 34/151 (22%), Positives = 55/151 (36%), Gaps = 18/151 (11%) Query: 59 LEVIIEKANAAPIIVAYHFNSDLARLQ---------KAFPQGRTLD-KDPCTIQEWNEGK 108 L I + ++ ++ L L G T + K + +N+ Sbjct: 626 LANIRNSKSGDKTVIISNYTQTLEVLATMCKTRGYAYFQLDGSTANAKRQQLVNLYNDPA 685 Query: 109 IP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVF 166 P + + G GLNL GGN LV F W+ Q + R+ + G K+ V Sbjct: 686 RPEFVFLLSSKAGGVGLNL-IGGNHLVLFDADWNPANDAQSMARVW-----REGQKKIVS 739 Query: 167 VYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 +Y TI+E + QR TK + + Sbjct: 740 IYRTFTTGTIEEKIFQRQLTKQALSTSITEG 770 >gi|297735171|emb|CBI17533.3| unnamed protein product [Vitis vinifera] Length = 800 Score = 92.3 bits (228), Expect = 3e-17, Method: Composition-based stats. Identities = 24/142 (16%), Positives = 56/142 (39%), Gaps = 18/142 (12%) Query: 66 ANAAPIIVAYHFNSDLARLQKAFPQ----------GRTLDKDPCTIQEWN--EGKIPLLF 113 A +++ + L ++ F + LD+ I+E+N + Sbjct: 568 ARKHKVLIFSQWTKILDIMEYYFSEKGLEVCRIDGSVRLDERKRQIEEFNDMNSNCRVFL 627 Query: 114 AHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQ 173 + G G+NL + + + W+ + Q ++R + G + V VY L Sbjct: 628 LSTRAGGLGINLT-AADTCILYDSDWNPQMDLQAMDRC-----HRIGQTKPVHVYRLATA 681 Query: 174 NTIDELVLQRLRTKSTIQDLLL 195 +I+ +L+R +K ++ +++ Sbjct: 682 QSIEGRMLKRAFSKLKLEHVVI 703 >gi|5917756|gb|AAD56024.1|AF181827_1 chromodomain helicase DNA binding protein 1 [Nymphicus hollandicus] Length = 918 Score = 92.3 bits (228), Expect = 3e-17, Method: Composition-based stats. Identities = 27/153 (17%), Positives = 56/153 (36%), Gaps = 21/153 (13%) Query: 68 AAPIIVAYHFNSDLARLQKAFP---------QGRTLDK-DPCTIQEWN-EGKIPL-LFAH 115 +++ L L + G + + +N EG Sbjct: 426 GNRVLIFSQMVRMLDILAEYLKYRQFPFQRLDGSIKGELRKQALDHFNAEGSEDFCFLLS 485 Query: 116 PASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNT 175 + G G+NL + +V F W+ + Q R + G K+ V +Y L+ + + Sbjct: 486 TRAGGLGINL-ASADTVVIFDSDWNPQNDLQAQAR-----AHRIGQKKQVNIYRLVTKGS 539 Query: 176 IDELVLQRLRTKSTIQDLL---LNALKKETIHV 205 ++E +L+R + K + L+ ++ K +H Sbjct: 540 VEEDILERAKKKMVLDHLVIQRMDTTGKTVLHT 572 >gi|5917754|gb|AAD56022.1|AF181825_1 chromodomain helicase DNA binding protein 1 [Aegolius funereus] Length = 918 Score = 92.3 bits (228), Expect = 3e-17, Method: Composition-based stats. Identities = 27/153 (17%), Positives = 56/153 (36%), Gaps = 21/153 (13%) Query: 68 AAPIIVAYHFNSDLARLQKAFP---------QGRTLDK-DPCTIQEWN-EGKIPL-LFAH 115 +++ L L + G + + +N EG Sbjct: 426 GNRVLIFSQMVRMLDILAEYLKYRQFPFQRLDGSIKGELRKQALDHFNAEGSEDFCFLLS 485 Query: 116 PASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNT 175 + G G+NL + +V F W+ + Q R + G K+ V +Y L+ + + Sbjct: 486 TRAGGLGINL-ASADTVVIFDSDWNPQNDLQAQAR-----AHRIGQKKQVNIYRLVTKGS 539 Query: 176 IDELVLQRLRTKSTIQDLL---LNALKKETIHV 205 ++E +L+R + K + L+ ++ K +H Sbjct: 540 VEEDILERAKKKMVLDHLVIQRMDTTGKTVLHT 572 >gi|313228968|emb|CBY18120.1| unnamed protein product [Oikopleura dioica] Length = 996 Score = 92.3 bits (228), Expect = 3e-17, Method: Composition-based stats. Identities = 38/227 (16%), Positives = 86/227 (37%), Gaps = 39/227 (17%) Query: 6 KFQRELYCDLQGENIEAFNSAS-----------KTVKCLQLANGAVYYD--------EEK 46 + Q+ Y + ++I+ N+ + + N +D Sbjct: 360 EMQKNWYKKILLKDIDILNTGGDKGGGKMRLMNILMHLRKCTNHPYLFDGAEPGPPYTTD 419 Query: 47 HWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARL---------QKAFPQGRTLD 95 + K+ L+ +++K AN +++ F S L + G T Sbjct: 420 QHIVDNCGKMVILDKLLKKCKANGDRVLLFTQFTSMLDIFEDYCLWRDYKYCRLDGGTDH 479 Query: 96 KDPC-TIQEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIG 152 D +I +N + L + G G+NL N+++ + W+ + Q ++R Sbjct: 480 ADRTESIDAYNAPNSEKFLFMLSTKAGGLGINLMT-ANVVIIYDSDWNPQNDLQAMDR-- 536 Query: 153 VTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 + G K+ V+VY +I ++DE +++R K + +++ + + Sbjct: 537 ---AHRIGQKKQVYVYRMITDESVDERIIERSELKMRLDSVVIQSGR 580 >gi|302510062|ref|XP_003016991.1| hypothetical protein ARB_05285 [Arthroderma benhamiae CBS 112371] gi|291180561|gb|EFE36346.1| hypothetical protein ARB_05285 [Arthroderma benhamiae CBS 112371] Length = 1055 Score = 92.3 bits (228), Expect = 3e-17, Method: Composition-based stats. Identities = 29/158 (18%), Positives = 58/158 (36%), Gaps = 18/158 (11%) Query: 52 HDEKIKALEVIIEKANAA-PIIVAYHFNSDLARLQKAFPQG-----------RTLDKDPC 99 KI+ L ++++ + IV F S L +++ G R ++ Sbjct: 814 TSAKIRHLMRVLKRESGQFKFIVFSVFTSMLDKIEPFLKNGGIGYARYDGGMRNDLREAS 873 Query: 100 TIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQA 159 + N +L + GLNL + +V +W+ +Q I+R+ + Sbjct: 874 LNRLRNSSGTRVLLCSLRAGSLGLNLT-AASRVVILEPFWNPFVEEQAIDRV-----HRL 927 Query: 160 GFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 V VY L + T++E +L+ K + + Sbjct: 928 NQTVDVKVYKLTIKGTVEERILELQERKRELAKSTIEG 965 >gi|254565555|ref|XP_002489888.1| Protein whose overexpression affects chromosome stability, potential Cdc28p substrate [Pichia pastoris GS115] gi|238029684|emb|CAY67607.1| Protein whose overexpression affects chromosome stability, potential Cdc28p substrate [Pichia pastoris GS115] gi|328350301|emb|CCA36701.1| putative SNF2 family helicase/ATPase [Pichia pastoris CBS 7435] Length = 1009 Score = 92.3 bits (228), Expect = 3e-17, Method: Composition-based stats. Identities = 30/158 (18%), Positives = 65/158 (41%), Gaps = 20/158 (12%) Query: 53 DEKIKALEVIIEK---ANAAPIIVAYHFNSDLARLQKAFPQGRTL----------DKDPC 99 K++ L+ +++K +++ F L ++ + D Sbjct: 822 SGKVQKLKELLDKIIFEREEKVLIFSLFTQVLDIIEVVLSVLKIKFLRLDGQTSVDIRQD 881 Query: 100 TIQEWNEGK-IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQ 158 I ++ E + IP+ + G G+NL N+++ F ++ + +Q +R + Sbjct: 882 IIDKFYEDETIPVFLLSTKAGGFGINLVCANNVII-FDQSFNPHDDKQAEDR-----AHR 935 Query: 159 AGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 G + V VY ++ +NTIDE +LQ K + + + Sbjct: 936 VGQTKEVNVYRMVTKNTIDESILQLALNKLQLDSTVSD 973 >gi|295671388|ref|XP_002796241.1| conserved hypothetical protein [Paracoccidioides brasiliensis Pb01] gi|226284374|gb|EEH39940.1| conserved hypothetical protein [Paracoccidioides brasiliensis Pb01] Length = 999 Score = 92.3 bits (228), Expect = 3e-17, Method: Composition-based stats. Identities = 31/156 (19%), Positives = 58/156 (37%), Gaps = 19/156 (12%) Query: 54 EKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLD----------KDPCTIQE 103 + L I + +++ ++ S L L K K + + Sbjct: 669 RVLDQLLHNIRHTTSEKVVLISNYTSTLDLLGKLLTSLSLSFLRLDGSTPAAKRQALVDD 728 Query: 104 WNEGK---IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 +N + + G GLNL G + LV F + W+ Q + RI + G Sbjct: 729 FNRSSSTSVFAFLLSAKAGGTGLNL-IGASRLVLFDVDWNPATDMQAMARI-----HRDG 782 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 KR +Y + + ++E + QR TK + D +++ Sbjct: 783 QKRHCRIYRFLLKGALEEKIWQRQVTKIGLADSVMD 818 >gi|302830326|ref|XP_002946729.1| hypothetical protein VOLCADRAFT_120362 [Volvox carteri f. nagariensis] gi|300267773|gb|EFJ51955.1| hypothetical protein VOLCADRAFT_120362 [Volvox carteri f. nagariensis] Length = 1229 Score = 92.3 bits (228), Expect = 3e-17, Method: Composition-based stats. Identities = 24/138 (17%), Positives = 46/138 (33%), Gaps = 17/138 (12%) Query: 66 ANAAPIIVAYHFNSDLARLQKAFPQGRT-----------LDKDPCTIQEWNEGKIPLLFA 114 A ++ L+ L+ + ++ +Q + IP+ Sbjct: 802 AEGHRTLIFSQSKVMLSILEAGVKAMKLSYCRIDGDVASAEERQAHVQRFQNSNIPVFLL 861 Query: 115 HPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQN 174 G GL L + ++ W+ Q ++R + G R V VY LI Sbjct: 862 TSQVGGLGLTLT-AADRVIIVDPAWNPSVDDQSVDR-----AYRMGQTRDVVVYRLITCG 915 Query: 175 TIDELVLQRLRTKSTIQD 192 T++E + +R K + Sbjct: 916 TVEEKIYRRQVFKGGLSK 933 >gi|145345466|ref|XP_001417230.1| predicted protein [Ostreococcus lucimarinus CCE9901] gi|144577457|gb|ABO95523.1| predicted protein [Ostreococcus lucimarinus CCE9901] Length = 898 Score = 92.3 bits (228), Expect = 3e-17, Method: Composition-based stats. Identities = 25/159 (15%), Positives = 57/159 (35%), Gaps = 19/159 (11%) Query: 53 DEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTL-----------DKDPC 99 K + L ++++ A +V + L ++ + ++D Sbjct: 498 SAKSRFLMAMLDRFRAEGRRTLVFSQSQATLNVVEACIREANIKFVRIDGKVNVDERDRR 557 Query: 100 TIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQA 159 Q + IP++ G GL L +++ + W+ Q ++R + Sbjct: 558 VTQFRSNADIPVMLLTARVGGLGLTLTEATRVII-YDPAWNPTTDNQSVDR-----AYRI 611 Query: 160 GFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNAL 198 G + V VY L+ T++E + +R K + + + Sbjct: 612 GQTKDVVVYRLVTCGTVEEKIYRRQVFKGGVSKSATDGV 650 >gi|323452052|gb|EGB07927.1| hypothetical protein AURANDRAFT_26802 [Aureococcus anophagefferens] Length = 1012 Score = 92.3 bits (228), Expect = 3e-17, Method: Composition-based stats. Identities = 23/143 (16%), Positives = 54/143 (37%), Gaps = 18/143 (12%) Query: 66 ANAAPIIVAYHFNSDLARL---------QKAFPQGRTLDKDPCTIQE-WNEG--KIPLLF 113 A + +++ L L + G T D + + +N + Sbjct: 444 AQDSRVLIFSQMTRMLDILEDYMRLNQYKYCRIDGSTSGDDRDSQMDVFNAPGSEKFAFL 503 Query: 114 AHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQ 173 + G G+NL +I+V + W+ + Q ++R + G + V V+ + + Sbjct: 504 LSTRAGGLGINL-ATADIVVLYDSDWNPQVDLQAMDR-----AHRIGQTKPVTVFRFVTE 557 Query: 174 NTIDELVLQRLRTKSTIQDLLLN 196 T++E +++R K + ++ Sbjct: 558 GTVEEKIIERADRKLFLDAAVIQ 580 >gi|320580465|gb|EFW94687.1| hypothetical protein HPODL_3059 [Pichia angusta DL-1] Length = 1575 Score = 92.3 bits (228), Expect = 3e-17, Method: Composition-based stats. Identities = 29/171 (16%), Positives = 60/171 (35%), Gaps = 24/171 (14%) Query: 42 YDEEKHWKEVHDEKIKAL-EVIIEKANAA---PIIVAYHFNSDLARLQKAFPQGR----- 92 D WK KI+AL E + + + IV F S L ++ + Sbjct: 1393 IDMGGEWK--SSTKIEALMEELYKSRSDRQTVKSIVFSQFTSMLDLVEWRLKRAGFSIAK 1450 Query: 93 ------TLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEH-Q 145 + +D + + + G LNL + + WW+ Sbjct: 1451 LQGSMTPIQRDSVIQHFMTNPSVEVFLVSLKAGGVALNLVEANQVFIL-DSWWNPALDTG 1509 Query: 146 QMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 Q +RI + G R + + L+ +++I+ +++ + K+ + L+ Sbjct: 1510 QAADRI-----HRIGQHRPIRIVKLVIEDSIESRIIELQQKKADMVKATLD 1555 >gi|237844775|ref|XP_002371685.1| SWI/SNF-related matrix-associated actin-dependent regulator of chromatin, putative [Toxoplasma gondii ME49] gi|211969349|gb|EEB04545.1| SWI/SNF-related matrix-associated actin-dependent regulator of chromatin, putative [Toxoplasma gondii ME49] Length = 1249 Score = 92.3 bits (228), Expect = 3e-17, Method: Composition-based stats. Identities = 35/219 (15%), Positives = 82/219 (37%), Gaps = 31/219 (14%) Query: 2 KQYHKFQRELYCDLQGENIEA-FNSASKTVKCLQLANGAVYYDE---------EKHWKEV 51 + Y + LQG + ++ + N +D +H E Sbjct: 575 QLYKDLLTKNVAALQGAEGAGRTQLLNLAMQLRKACNHPYLFDGYESEHADPFGEHVIE- 633 Query: 52 HDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQ-----KAFPQGRTL-----DKDPC 99 + K++ + ++ + ++ + L+ + F R D+ Sbjct: 634 NAGKLRFCDRLLRRLIQENRRCLIFTQMTKMIDILEDYCRIRLFKYCRIDGNTSGDERDR 693 Query: 100 TIQEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 I+ +N IP+ + G G+NL + ++ + W+ + Q ++R+ Sbjct: 694 QIEAFNAPGSDIPIFLLSTRAGGLGINL-ATADTVILYDSDWNPQVDLQAMDRV-----H 747 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + G K AV VY L+ ++TI++ +++R K + ++ Sbjct: 748 RIGQKSAVNVYRLVHEHTIEQKIIERAMLKLQLDTAIIQ 786 >gi|32563629|ref|NP_491994.2| hypothetical protein H06O01.2 [Caenorhabditis elegans] gi|25004979|emb|CAB07481.2| C. elegans protein H06O01.2, confirmed by transcript evidence [Caenorhabditis elegans] Length = 1461 Score = 92.3 bits (228), Expect = 3e-17, Method: Composition-based stats. Identities = 28/175 (16%), Positives = 68/175 (38%), Gaps = 22/175 (12%) Query: 40 VYYDEEKHWKEV--HDEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQ-----KAFPQ 90 +Y D + +++ K+ L+ ++ + +++ L LQ + FP Sbjct: 695 IYDDAQGRLQQLLKSSGKLILLDKLLCRLKDKGHRVLIFSQMVMMLDILQEYLQLRRFPS 754 Query: 91 GRT-----LDKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEE 143 R D + +N + G G+NL + ++ F W+ + Sbjct: 755 QRLDGSMRADLRKQALDHYNAPGSTDFAFLLSTRAGGLGINL-ATADTVIIFDSDWNPQN 813 Query: 144 HQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNAL 198 Q + R + G + V +Y L+ + +++E +++R + K + L++ + Sbjct: 814 DLQAMSR-----AHRIGQTKTVNIYRLVTKGSVEEEIVERAKRKLVLDHLVIQRM 863 >gi|327283794|ref|XP_003226625.1| PREDICTED: LOW QUALITY PROTEIN: chromodomain-helicase-DNA-binding protein 2-like [Anolis carolinensis] Length = 1863 Score = 92.3 bits (228), Expect = 3e-17, Method: Composition-based stats. Identities = 27/161 (16%), Positives = 60/161 (37%), Gaps = 20/161 (12%) Query: 52 HDEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQKAF---------PQGRTLDK-DPC 99 K+ L+ ++ + +++ L L + G + Sbjct: 822 SSGKLILLDKLLSRLRERGNRVLIFSQMVRMLDILAEYLTIKHYPFQRLDGSIKGEIRKQ 881 Query: 100 TIQEWN-EGKIPL-LFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 + +N EG + G G+NL + +V F W+ + Q R Sbjct: 882 ALDHFNAEGSEDFCFLLSTRAGGLGINL-ASADTVVIFDSDWNPQNDLQAQAR-----AH 935 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNAL 198 + G K+ V +Y L+ + T++E +++R + K + L++ + Sbjct: 936 RIGQKKQVNIYRLVTKGTVEEEIIERAKKKMVLDHLVIQRM 976 >gi|325096129|gb|EGC49439.1| ATP-dependent helicase RIS1 [Ajellomyces capsulatus H88] Length = 1052 Score = 92.3 bits (228), Expect = 3e-17, Method: Composition-based stats. Identities = 30/163 (18%), Positives = 60/163 (36%), Gaps = 18/163 (11%) Query: 47 HWKEVHDEKIKALEVIIEKANAA-PIIVAYHFNSDLARLQKAFPQ-----GRTLDKDPCT 100 + + KI+ L I++ + IV F S L +++ R Sbjct: 809 TPEHLASTKIRYLMKILKAESGDYKFIVFSFFTSMLNKIEPFLKDSHIGYVRYDGAMRND 868 Query: 101 IQEW------NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 ++E N K +L + GLNL + +V +W+ +Q I+R+ Sbjct: 869 LREISLDKLRNSPKTRVLLCSLRAGSLGLNLT-AASRVVILEPFWNPFVEEQAIDRV--- 924 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + V +Y L +NT++E ++ K + + + Sbjct: 925 --HRLNQTVDVKIYKLTIKNTVEERIVDLQERKRELANATIEG 965 >gi|294654788|ref|XP_456864.2| DEHA2A12276p [Debaryomyces hansenii CBS767] gi|199429151|emb|CAG84839.2| DEHA2A12276p [Debaryomyces hansenii] Length = 771 Score = 92.3 bits (228), Expect = 3e-17, Method: Composition-based stats. Identities = 25/159 (15%), Positives = 64/159 (40%), Gaps = 20/159 (12%) Query: 52 HDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQK----------AFPQGRTLDKDPC 99 + K K L+ ++++ + +++ F L + Sbjct: 526 NSSKFKVLQQLLDELLSKNHKVLIFSQFTKVLDLINDWLVYENVEICRLDGSMNQSDREE 585 Query: 100 TIQEWN--EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 I E+N K + + G G+NL + ++ F W+ + Q I+R+ Sbjct: 586 EITEFNAKNSKQQVFLLSTRAGGLGINLT-ASDTVIIFDNDWNPQIDLQAIDRV-----H 639 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + G + V +Y + +N+I+E+++ + +K ++ +++ Sbjct: 640 RIGQTKPVKIYRFLIKNSIEEILISKSYSKRFLEKIIIQ 678 >gi|68485451|ref|XP_713403.1| hypothetical protein CaO19.13120 [Candida albicans SC5314] gi|68485546|ref|XP_713356.1| hypothetical protein CaO19.5675 [Candida albicans SC5314] gi|46434839|gb|EAK94239.1| hypothetical protein CaO19.5675 [Candida albicans SC5314] gi|46434887|gb|EAK94286.1| hypothetical protein CaO19.13120 [Candida albicans SC5314] Length = 1102 Score = 92.3 bits (228), Expect = 3e-17, Method: Composition-based stats. Identities = 26/151 (17%), Positives = 59/151 (39%), Gaps = 16/151 (10%) Query: 56 IKALEVIIEKANAAPIIVAYHFNS--DLARLQK--------AFPQGRTLDKDPCTIQEWN 105 ++ + + K +IV F S DL L + ++D I+E+ Sbjct: 932 LEMILELFSKNPGEKVIVFSQFTSLFDLMALVLQNQHIEFLRYDGTMSMDVKNNVIKEFY 991 Query: 106 EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 + +L + GL L ++ + +W+ +Q + R + G R V Sbjct: 992 QSSKNVLLLSLRAGNAGLTLTCANHVFIM-DPFWNPFVEEQAMGR-----AHRIGQTREV 1045 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 FV+ ++ T++ +++ +K + + L+ Sbjct: 1046 FVHRVLIAGTVENRIMELQESKKHLIESALD 1076 >gi|296005052|ref|XP_002808863.1| ATP-dependent helicase, putative [Plasmodium falciparum 3D7] gi|263429743|sp|C0H4W3|HEPF1_PLAF7 RecName: Full=Probable ATP-dependent helicase PF08_0048 gi|225632260|emb|CAX64141.1| ATP-dependent helicase, putative [Plasmodium falciparum 3D7] Length = 2082 Score = 92.3 bits (228), Expect = 3e-17, Method: Composition-based stats. Identities = 33/188 (17%), Positives = 73/188 (38%), Gaps = 29/188 (15%) Query: 32 CLQLANGA-VYYDEE---------KHWKEVHDEKIKALEVIIEKA--NAAPIIVAYHFNS 79 LQ+ N VY+D + K+ ALE ++ K ++ F Sbjct: 1736 ILQIKNATRVYHDAFLKQSIIFPLNKDISLGSGKLCALEKLLSKCKREGNKCLLFTQFIK 1795 Query: 80 DLARLQK----------AFPQGRTLDKDPCTIQEWNEGK-IPLLFAHPASCGHGLNLQYG 128 L L+ +++ + ++N K I + + S G+NL Sbjct: 1796 MLDILEIFLNHLNYSFIRLDGSTKVEQRQKIVTKFNNDKSIFIFISSTRSGSIGINLT-A 1854 Query: 129 GNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKS 188 N+++F+ W+ +Q ++R + G + V V+ + + T++E + ++ K Sbjct: 1855 ANVVIFYDTDWNPSIDKQAMDRC-----HRIGQTKDVHVFRFVCEYTVEENIWKKQLQKR 1909 Query: 189 TIQDLLLN 196 + ++ +N Sbjct: 1910 KLDNICIN 1917 >gi|213404796|ref|XP_002173170.1| helicase SWR1 [Schizosaccharomyces japonicus yFS275] gi|212001217|gb|EEB06877.1| helicase SWR1 [Schizosaccharomyces japonicus yFS275] Length = 1246 Score = 92.3 bits (228), Expect = 3e-17, Method: Composition-based stats. Identities = 30/155 (19%), Positives = 59/155 (38%), Gaps = 19/155 (12%) Query: 53 DEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQKAFP---------QGRTLDKDPCTI 101 KI L+ ++ K I++ F + L++ G T + I Sbjct: 883 SGKIDVLKKLLPKMKEQGDRILIFSQFTQVIDILEQVLDTLKITYTRLDGSTQVETRQDI 942 Query: 102 QEW--NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQA 159 + E I + + G G+NL N+++ + ++ + Q +R + Sbjct: 943 IDQFHRETDITVFLLSTKAGGFGINL-ACANVVILYDCSYNPFDDLQAEDR-----AHRV 996 Query: 160 GFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 G + V V LI +NT++E + + TK + L Sbjct: 997 GQTKQVTVIRLITKNTVEEYIQRLANTKLALDMSL 1031 >gi|126276965|ref|XP_001365054.1| PREDICTED: similar to chromodomain helicase DNA binding protein 2 [Monodelphis domestica] Length = 1836 Score = 92.3 bits (228), Expect = 3e-17, Method: Composition-based stats. Identities = 25/161 (15%), Positives = 59/161 (36%), Gaps = 20/161 (12%) Query: 52 HDEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQKAF---------PQGRTLDK-DPC 99 K+ L+ ++ + +++ L L + G + Sbjct: 796 SSGKLILLDKLLTRLRERGNRVLIFSQMVRMLDILAEYLTIKHYPFQRLDGSIKGEIRKQ 855 Query: 100 TIQEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 + +N + + G G+NL + +V F W+ + Q R Sbjct: 856 ALDHFNADGSEDFCFLLSTRAGGLGINL-ASADTVVIFDSDWNPQNDLQAQAR-----AH 909 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNAL 198 + G K+ V +Y L+ + T++E +++R + K + L++ + Sbjct: 910 RIGQKKQVNIYRLVTKGTVEEEIIERAKKKMVLDHLVIQRM 950 >gi|238881773|gb|EEQ45411.1| conserved hypothetical protein [Candida albicans WO-1] Length = 1100 Score = 92.3 bits (228), Expect = 3e-17, Method: Composition-based stats. Identities = 26/151 (17%), Positives = 59/151 (39%), Gaps = 16/151 (10%) Query: 56 IKALEVIIEKANAAPIIVAYHFNS--DLARLQK--------AFPQGRTLDKDPCTIQEWN 105 ++ + + K +IV F S DL L + ++D I+E+ Sbjct: 930 LEMILELFSKNPGEKVIVFSQFTSLFDLMALVLQNQHIEFLRYDGTMSMDVKNNVIKEFY 989 Query: 106 EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 + +L + GL L ++ + +W+ +Q + R + G R V Sbjct: 990 QSSKNVLLLSLRAGNAGLTLTCANHVFIM-DPFWNPFVEEQAMGR-----AHRIGQTREV 1043 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 FV+ ++ T++ +++ +K + + L+ Sbjct: 1044 FVHRVLIAGTVENRIMELQESKKHLIESALD 1074 >gi|171687883|ref|XP_001908882.1| hypothetical protein [Podospora anserina S mat+] gi|170943903|emb|CAP69555.1| unnamed protein product [Podospora anserina S mat+] Length = 1700 Score = 92.3 bits (228), Expect = 3e-17, Method: Composition-based stats. Identities = 35/177 (19%), Positives = 68/177 (38%), Gaps = 20/177 (11%) Query: 35 LANGAVYYDEEKHWKEVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLA------RLQ- 85 LANG+ ++ K+ L+ ++ K + +++ L R++ Sbjct: 769 LANGSGRREDAVKGLITSSGKMMLLDQLLAKLKKDGHRVLIFSQMVKMLDILADYLRIRG 828 Query: 86 ---KAFPQGRTLDKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWD 140 + I +N + G G+NL + ++ + W+ Sbjct: 829 YQFQRLDGTIPAGPRRLAINHFNAEDSDDFCFLLSTRAGGLGINLMT-ADTVIIYDSDWN 887 Query: 141 LEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + Q + R + G KR V VY L+A+ TI+E V++R R K ++ L + A Sbjct: 888 PQADLQAMAR-----AHRIGQKRPVNVYRLVAKQTIEEEVVKRARNKLFLEYLTIQA 939 >gi|78185742|ref|YP_378176.1| DEAD/DEAH box helicase-like [Synechococcus sp. CC9902] gi|78170036|gb|ABB27133.1| DEAD/DEAH box helicase-like [Synechococcus sp. CC9902] Length = 1063 Score = 92.3 bits (228), Expect = 3e-17, Method: Composition-based stats. Identities = 34/216 (15%), Positives = 67/216 (31%), Gaps = 34/216 (15%) Query: 8 QRELYCDLQGENIEAFNSA----------SKTVKCLQLANGAVYYDEEKHWKEVHDEKIK 57 Q+ LY + ++A +A + + Q+ N E + Sbjct: 830 QKSLYNKTVEDTLDAIATAPRGQRHGQVLALLTRLKQICNHPALAQREGAVDSEFLGRSA 889 Query: 58 ALE-----VIIEKANAAPIIVAYHFNSDLARLQKAFPQ----------GRTLDKDPC-TI 101 L + ++ F LQ Q G T D + Sbjct: 890 KLMRLEEILEEVIEAGDRALLFTQFAEWGHLLQAWMQQRWKSEVPFLHGGTRKSDRQAMV 949 Query: 102 QEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQA 159 + E L + G GLNL + + WW+ Q +R + Sbjct: 950 DRFQEDPRGPQLFLLSLKAGGVGLNLTRASH-VFHVDRWWNPAVENQATDR-----AYRI 1003 Query: 160 GFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 G V V+ + + +++E + Q +R K+ + + ++ Sbjct: 1004 GQTNRVMVHKFVTRGSVEEKIDQMIREKARMAEDVI 1039 >gi|149248412|ref|XP_001528593.1| SNF2-family ATP dependent chromatin remodeling factor snf21 [Lodderomyces elongisporus NRRL YB-4239] gi|146448547|gb|EDK42935.1| SNF2-family ATP dependent chromatin remodeling factor snf21 [Lodderomyces elongisporus NRRL YB-4239] Length = 1926 Score = 92.3 bits (228), Expect = 4e-17, Method: Composition-based stats. Identities = 40/227 (17%), Positives = 83/227 (36%), Gaps = 35/227 (15%) Query: 2 KQYHKFQRELYC---DLQGENIEAF--NSASKTVKCLQLANG-AVYYDEEKHWKEVHDE- 54 + Y + + D Q ++ N+ ++ ++ ++ N VY D E + Sbjct: 1180 RLYQQMLKYNVLYSGDPQNPDVAKPIKNANNQIMQLKKICNHPFVYEDVENFINPTSENN 1239 Query: 55 --------KIKALEVIIEK--ANAAPIIVAYH------FNSDLARLQK----AFPQGRTL 94 K + L+ ++ K +++ + D RL+ G Sbjct: 1240 DLIWRVAGKFELLDKVLPKFKQTGHKVLIFFQMTQIMDIMEDFLRLRNLKYMRLDGGTKA 1299 Query: 95 DKDPCTIQEWNEGKIPLL--FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIG 152 D ++ +N + G GLNLQ + ++ F W+ + Q Sbjct: 1300 DDRTELLKLFNAPDSEYFCFLLSTRAGGLGLNLQT-ADTVIIFDTDWNPHQDLQA----- 1353 Query: 153 VTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 R + G K V + LI +++++E++L+R K I ++ A K Sbjct: 1354 QDRAHRIGQKNEVRILRLITEDSVEEMILERAHAKLEIDGKVIQAGK 1400 >gi|118089323|ref|XP_420137.2| PREDICTED: hypothetical protein [Gallus gallus] Length = 1204 Score = 92.3 bits (228), Expect = 4e-17, Method: Composition-based stats. Identities = 33/148 (22%), Positives = 56/148 (37%), Gaps = 18/148 (12%) Query: 44 EEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQE 103 EE H V + K L IIE+ ++ + F + R+ L + I Sbjct: 472 EEGHRTLVFSQSRKML-DIIER-----VLSSRQFK--IMRIDG---TVTHLTEREKRINA 520 Query: 104 WNEGK-IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFK 162 + K + G G+ L N +V F W+ Q ++R + G K Sbjct: 521 FQSNKDYSVFLLTTQVGGVGITLT-AANRVVIFDPSWNPATDAQAVDR-----AYRIGQK 574 Query: 163 RAVFVYYLIAQNTIDELVLQRLRTKSTI 190 V +Y LI T++E + +R K ++ Sbjct: 575 ENVVIYRLITCGTVEEKIYRRQVFKDSL 602 >gi|255718763|ref|XP_002555662.1| KLTH0G14498p [Lachancea thermotolerans] gi|238937046|emb|CAR25225.1| KLTH0G14498p [Lachancea thermotolerans] Length = 1436 Score = 92.3 bits (228), Expect = 4e-17, Method: Composition-based stats. Identities = 26/159 (16%), Positives = 61/159 (38%), Gaps = 20/159 (12%) Query: 52 HDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARL----------QKAFPQGRTLDKDPC 99 K+ L+ ++ + + +++ L L + + Sbjct: 674 SSGKMVLLDQLLTRLKKDGHRVLIFSQMVRMLDILGDYLNIKGVNYQRLDGTVPSAQRRI 733 Query: 100 TIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 +I +N + + G G+NL + ++ F W+ + Q + R Sbjct: 734 SIDHFNSPDSNDFVFLLSTRAGGLGINLMT-ADTVIIFDSDWNPQADLQAMAR-----AH 787 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + G K V VY ++++T++E VL+R R K ++ +++ Sbjct: 788 RIGQKNHVMVYRFVSKDTVEEEVLERARKKMILEYAIIS 826 >gi|258576739|ref|XP_002542551.1| hypothetical protein UREG_02067 [Uncinocarpus reesii 1704] gi|237902817|gb|EEP77218.1| hypothetical protein UREG_02067 [Uncinocarpus reesii 1704] Length = 1870 Score = 92.3 bits (228), Expect = 4e-17, Method: Composition-based stats. Identities = 28/142 (19%), Positives = 54/142 (38%), Gaps = 20/142 (14%) Query: 69 APIIVAYHFNSDLARLQK-------------AFPQGRTLDKDPCTIQEWN-EGKIPLLFA 114 ++ L +Q K + ++N + +L Sbjct: 1649 HRALIFCQMKEMLDIVQNDVLKKLLPSVQYLRLDGSVEATKRQNIVNQFNTDPSYDVLLL 1708 Query: 115 HPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQN 174 + G GLNL G + ++F W+ ++ Q ++R + G K+ V VY LI + Sbjct: 1709 TTSVGGLGLNLT-GADTVIFVEHDWNPQKDIQAMDR-----AHRIGQKKVVNVYRLITRG 1762 Query: 175 TIDELVLQRLRTKSTIQDLLLN 196 T++E +L R K + ++N Sbjct: 1763 TLEEKILNLQRFKIDVASTVVN 1784 >gi|218188726|gb|EEC71153.1| hypothetical protein OsI_02992 [Oryza sativa Indica Group] Length = 997 Score = 92.3 bits (228), Expect = 4e-17, Method: Composition-based stats. Identities = 25/140 (17%), Positives = 50/140 (35%), Gaps = 17/140 (12%) Query: 65 KANAAPIIVAYHFNSDLARLQKA----------FPQGRTLDKDPCTIQEWNEGK-IPLLF 113 K +++ L +++A T K I+ + P+ Sbjct: 481 KEEGHKVLIFSQTRLMLDEIEEALTNKGVHFARMDGTVTASKREAIIKGFQSKDGPPIFL 540 Query: 114 AHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQ 173 G GLNL + ++ W+ Q ++R+ + G ++ V +Y LI Sbjct: 541 MTTKVGGIGLNLTN-ASRVIIADPSWNPSLDNQCVDRV-----YRIGQEKNVIIYRLITS 594 Query: 174 NTIDELVLQRLRTKSTIQDL 193 TI+E + ++ +K I Sbjct: 595 CTIEERIYEKQVSKEGIFKA 614 >gi|221052138|ref|XP_002257645.1| DNA repair protein rad54 [Plasmodium knowlesi strain H] gi|193807475|emb|CAQ37981.1| DNA repair protein rad54, putative [Plasmodium knowlesi strain H] Length = 1052 Score = 92.3 bits (228), Expect = 4e-17, Method: Composition-based stats. Identities = 30/157 (19%), Positives = 59/157 (37%), Gaps = 20/157 (12%) Query: 53 DEKIKALEVI---IEKANAAPIIVAYHFNSDLARLQ----------KAFPQGRTLDKDPC 99 K + L + I++ +++ ++ L ++ G + K Sbjct: 543 SCKFQLLHFLLKTIKQNTTDKVVIVSNYTQTLDYMEILCRENSYKFVRLDGGINIKKRHK 602 Query: 100 TIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQ 158 I ++ I + S G G+NL N LV W+ +Q + R+ + Sbjct: 603 VINDFTHSNDIFIFLLSSKSGGCGINL-ISSNRLVLLDPDWNPANDKQALARVW-----R 656 Query: 159 AGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 G K+ ++Y TIDE V QR +K + +++ Sbjct: 657 EGQKKICYIYRFFCTGTIDEKVYQRQISKDGLSSMIV 693 >gi|71005328|ref|XP_757330.1| hypothetical protein UM01183.1 [Ustilago maydis 521] gi|46096734|gb|EAK81967.1| hypothetical protein UM01183.1 [Ustilago maydis 521] Length = 1692 Score = 92.3 bits (228), Expect = 4e-17, Method: Composition-based stats. Identities = 37/232 (15%), Positives = 80/232 (34%), Gaps = 39/232 (16%) Query: 1 MKQYHKFQRELYCDLQGENIEAFNSAS------KTVKCLQL---ANGAVYYD-------- 43 +K Y + ++ +N A A +QL N ++ Sbjct: 1041 LKLYQQMKKHKMILSGEDNSTAGKKAKPQGIRGLQNAIMQLRKICNHPYVFEQVELAINP 1100 Query: 44 --EEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARL---------QKAFPQ 90 E K + L+ ++ K A +++ + + + + + Sbjct: 1101 TKENGPDLYRVAGKFELLDRLLPKLFATKHRVLIFFQMTAIMDIMEDFLRYRGFKYLRLD 1160 Query: 91 GRTL-DKDPCTIQEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQM 147 G T D ++ +N + + G GLNLQ + ++ + W+ + Q Sbjct: 1161 GSTKPDDRSQLLKLFNAPGSDYFVFILSTRAGGLGLNLQ-SADTVIIYDSDWNPHQDLQA 1219 Query: 148 IERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 R + G K V + L+ + +++E +L R + K I+ ++ A K Sbjct: 1220 -----QDRAHRIGQKMEVRILRLVTEKSVEETILARAQDKLEIEGKVIQAGK 1266 >gi|156848828|ref|XP_001647295.1| hypothetical protein Kpol_1002p85 [Vanderwaltozyma polyspora DSM 70294] gi|156117980|gb|EDO19437.1| hypothetical protein Kpol_1002p85 [Vanderwaltozyma polyspora DSM 70294] Length = 1070 Score = 92.3 bits (228), Expect = 4e-17, Method: Composition-based stats. Identities = 40/223 (17%), Positives = 82/223 (36%), Gaps = 39/223 (17%) Query: 7 FQRELYCDLQGENIEAFNSAS--------KTVKCLQLAN-------------GAVYYDEE 45 QR+ Y + ++++A N A+ +QL G Y +E Sbjct: 380 MQRKWYKQILEKDLDAVNGANGNKESKTRLLNIVMQLRKCSNHPYLFDGAEPGPPYTTDE 439 Query: 46 KHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQ---------KAFPQGRTLDK 96 + + KA + +++ + L L+ G T + Sbjct: 440 HLVYNSEKLLVLDKLLKKLKAEGSRVLIFSQMSRILDILEDYCYFRGYEYCRIDGSTAHE 499 Query: 97 DP-CTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGV 153 D I ++N L + G G+NL +++V + W+ + Q ++R Sbjct: 500 DRIQAIDDYNAPDSNKFLFLLTTRAGGLGINLT-SADVVVLYDSDWNPQADLQAMDR--- 555 Query: 154 TRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + G K+ V V+ L+ N+++E +L+R K + L++ Sbjct: 556 --AHRIGQKKQVKVFRLVTDNSVEEKILERATQKLRLDQLVIQ 596 >gi|224062717|ref|XP_002197759.1| PREDICTED: chromodomain helicase DNA binding protein 2 [Taeniopygia guttata] Length = 1826 Score = 92.3 bits (228), Expect = 4e-17, Method: Composition-based stats. Identities = 25/161 (15%), Positives = 59/161 (36%), Gaps = 20/161 (12%) Query: 52 HDEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQKAF---------PQGRTLDK-DPC 99 K+ L+ ++ + +++ L L + G + Sbjct: 784 SSGKLILLDKLLTRLRERGNRVLIFSQMVRMLDILAEYLTIKHYPFQRLDGSIKGEIRKQ 843 Query: 100 TIQEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 + +N + + G G+NL + +V F W+ + Q R Sbjct: 844 ALDHFNADGSEDFCFLLSTRAGGLGINL-ASADTVVIFDSDWNPQNDLQAQAR-----AH 897 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNAL 198 + G K+ V +Y L+ + T++E +++R + K + L++ + Sbjct: 898 RIGQKKQVNIYRLVTKGTVEEEIIERAKKKMVLDHLVIQRM 938 >gi|268567385|ref|XP_002639966.1| Hypothetical protein CBG10790 [Caenorhabditis briggsae] Length = 1463 Score = 92.3 bits (228), Expect = 4e-17, Method: Composition-based stats. Identities = 35/218 (16%), Positives = 81/218 (37%), Gaps = 31/218 (14%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLAN-----GAVYYDEEKHWKEV--HDE 54 K Y + + + + G N + KC A+ +Y D + +++ Sbjct: 669 KNYRELSKGVKGSINGF----VNLVMELKKCCNHASLTRQYDYIYDDAQGRLQQLLKSSG 724 Query: 55 KIKALEVIIEKA--NAAPIIVAYHFNSDLARLQ-----KAFPQGRT-----LDKDPCTIQ 102 K+ L+ ++ + +++ L LQ + FP R D + Sbjct: 725 KLILLDKLLCRLRDKGHRVLIFSQMVMMLDILQEYLQLRRFPSQRLDGSMRADLRKQALD 784 Query: 103 EWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 +N + G G+NL + ++ F W+ + Q + R + G Sbjct: 785 HYNAPGSTDFAFLLSTRAGGLGINL-ATADTVIIFDSDWNPQNDLQAMSR-----AHRIG 838 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNAL 198 + V +Y L+ + +++E +++R + K + L++ + Sbjct: 839 QTKTVNIYRLVTKGSVEEEIVERAKRKLVLDHLVIQRM 876 >gi|297807991|ref|XP_002871879.1| hypothetical protein ARALYDRAFT_488814 [Arabidopsis lyrata subsp. lyrata] gi|297317716|gb|EFH48138.1| hypothetical protein ARALYDRAFT_488814 [Arabidopsis lyrata subsp. lyrata] Length = 1061 Score = 92.3 bits (228), Expect = 4e-17, Method: Composition-based stats. Identities = 39/190 (20%), Positives = 78/190 (41%), Gaps = 26/190 (13%) Query: 28 KTVKCLQLAN------GAVYYDEEKHWKEVHDEKIKALEVIIEKAN--AAPIIVAYHFNS 79 T++ + N G Y +K K + L+ ++ K I++ Sbjct: 662 LTMQLRKCCNHPYLFVGGDYNMWKKPEIVRASGKFELLDRLLPKLKKAGHRILLFSQMTR 721 Query: 80 DLARLQ---------KAFPQGRTL-DKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQY 127 + L+ G T D+ ++++NE + P + + G GLNLQ Sbjct: 722 LIDLLEIYLTLNDYMYLRLDGTTKTDQRGVLLKQFNEPESPYFMFLLSTRAGGLGLNLQT 781 Query: 128 GGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTK 187 + ++ F W+ + QQ +R + G K+ V V+ L++ +I+E++L+R + K Sbjct: 782 -ADTIIIFDSDWNPQMDQQAEDR-----AHRIGQKKEVRVFVLVSIGSIEEVILERAKQK 835 Query: 188 STIQDLLLNA 197 I ++ A Sbjct: 836 MGIDAKVIQA 845 >gi|301095371|ref|XP_002896786.1| conserved hypothetical protein [Phytophthora infestans T30-4] gi|262108669|gb|EEY66721.1| conserved hypothetical protein [Phytophthora infestans T30-4] Length = 1092 Score = 92.3 bits (228), Expect = 4e-17, Method: Composition-based stats. Identities = 40/231 (17%), Positives = 82/231 (35%), Gaps = 44/231 (19%) Query: 2 KQY---HKFQRELYCDLQGENIEAFNSAS------KTVKCLQLAN-------------GA 39 K Y + QRE Y + + N+ +QL G Sbjct: 383 KLYVGLSEMQREWYMRVLHRDATHLNAIGGSDRVRLLNILMQLRKVCNHPYLFEGAEPGP 442 Query: 40 VYYDEEKHWKEVHDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAF--------- 88 Y + W+ + K+ L ++ +A + +++ S + L+ Sbjct: 443 PYQEGPHLWE--NCGKMTLLHKLLPKLQAQGSRVLIFCQMTSMMDILEDYMRYFSHDYCR 500 Query: 89 PQGRTLDKDP-CTIQEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQ 145 G T +D ++E+NE + G G+NL +I++ F W+ + Sbjct: 501 LDGSTKGEDRDNMMEEFNEPGSSKFCFLLSTRAGGLGINL-ATADIVILFDSDWNPQVDL 559 Query: 146 QMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 Q ++R + G + V V+ I T++E +++R K + ++ Sbjct: 560 QAMDR-----AHRIGQTKIVRVFRFITDGTVEEKIVERAERKLYLDAAIIQ 605 >gi|67923123|ref|ZP_00516613.1| SNF2-related:Helicase, C-terminal [Crocosphaera watsonii WH 8501] gi|67855021|gb|EAM50290.1| SNF2-related:Helicase, C-terminal [Crocosphaera watsonii WH 8501] Length = 1046 Score = 92.3 bits (228), Expect = 4e-17, Method: Composition-based stats. Identities = 22/107 (20%), Positives = 43/107 (40%), Gaps = 7/107 (6%) Query: 92 RTLDKDPCTIQEWNEGKIP-LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 R + + + + P + + G GLNL N + WW+ Q +R Sbjct: 918 RRVQRQEMIDRFQQDPNGPRIFILSLKAGGTGLNLTR-ANHVFHIDRWWNPAVENQATDR 976 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + G KR V V+ + T++E + + L +K + + ++A Sbjct: 977 -----AFRLGQKRNVQVHKFVCTGTLEEKINEMLESKQKLAEQTVDA 1018 >gi|309361198|emb|CAP30097.2| hypothetical protein CBG_10790 [Caenorhabditis briggsae AF16] Length = 1465 Score = 92.3 bits (228), Expect = 4e-17, Method: Composition-based stats. Identities = 35/218 (16%), Positives = 81/218 (37%), Gaps = 31/218 (14%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLAN-----GAVYYDEEKHWKEV--HDE 54 K Y + + + + G N + KC A+ +Y D + +++ Sbjct: 671 KNYRELSKGVKGSINGF----VNLVMELKKCCNHASLTRQYDYIYDDAQGRLQQLLKSSG 726 Query: 55 KIKALEVIIEKA--NAAPIIVAYHFNSDLARLQ-----KAFPQGRT-----LDKDPCTIQ 102 K+ L+ ++ + +++ L LQ + FP R D + Sbjct: 727 KLILLDKLLCRLRDKGHRVLIFSQMVMMLDILQEYLQLRRFPSQRLDGSMRADLRKQALD 786 Query: 103 EWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 +N + G G+NL + ++ F W+ + Q + R + G Sbjct: 787 HYNAPGSTDFAFLLSTRAGGLGINL-ATADTVIIFDSDWNPQNDLQAMSR-----AHRIG 840 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNAL 198 + V +Y L+ + +++E +++R + K + L++ + Sbjct: 841 QTKTVNIYRLVTKGSVEEEIVERAKRKLVLDHLVIQRM 878 >gi|240278065|gb|EER41572.1| SNF2 family helicase/ATPase [Ajellomyces capsulatus H143] Length = 1028 Score = 92.3 bits (228), Expect = 4e-17, Method: Composition-based stats. Identities = 30/163 (18%), Positives = 60/163 (36%), Gaps = 18/163 (11%) Query: 47 HWKEVHDEKIKALEVIIEKANAA-PIIVAYHFNSDLARLQKAFPQ-----GRTLDKDPCT 100 + + KI+ L I++ + IV F S L +++ R Sbjct: 785 TPEHLASTKIRYLMKILKAESGDYKFIVFSFFTSMLNKIEPFLKDSHIGYVRYDGAMRND 844 Query: 101 IQEW------NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 ++E N K +L + GLNL + +V +W+ +Q I+R+ Sbjct: 845 LREISLDKLRNSPKTRVLLCSLRAGSLGLNLT-AASRVVILEPFWNPFVEEQAIDRV--- 900 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + V +Y L +NT++E ++ K + + + Sbjct: 901 --HRLNQTVDVKIYKLTIKNTVEERIVDLQERKRELANATIEG 941 >gi|149636761|ref|XP_001505482.1| PREDICTED: hypothetical protein [Ornithorhynchus anatinus] Length = 1393 Score = 92.3 bits (228), Expect = 4e-17, Method: Composition-based stats. Identities = 33/178 (18%), Positives = 63/178 (35%), Gaps = 27/178 (15%) Query: 34 QLANGAVYYDEEKHWKEVHDE-------KIKALEVIIEKA--NAAPIIVAYHFNSDLARL 84 Q NG +Y + ++ D+ K+ L ++++ +V L + Sbjct: 436 QDENGTDHYSDINRIGQLPDQTLMEESGKLMFLMALLKRLQREGHQTLVFSQSRKMLDII 495 Query: 85 QK-----AFPQGRT------LDKDPCTIQEWNEGK-IPLLFAHPASCGHGLNLQYGGNIL 132 ++ F R L + I + + K + G GL L + Sbjct: 496 ERLLTNTHFKILRVDGTIAQLGEREKRISLFQKNKDYSVFLLTTQVGGVGLTLT-AATRV 554 Query: 133 VFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 V F W+ Q ++R + G K V +Y LI T++E + +R K ++ Sbjct: 555 VIFDPSWNPATDAQAVDR-----AYRIGQKENVVIYRLITCGTVEEKIYRRQVFKDSL 607 >gi|5917757|gb|AAD56025.1|AF181828_1 chromodomain helicase DNA binding protein 1 [Nymphicus hollandicus] Length = 918 Score = 92.3 bits (228), Expect = 4e-17, Method: Composition-based stats. Identities = 27/153 (17%), Positives = 56/153 (36%), Gaps = 21/153 (13%) Query: 68 AAPIIVAYHFNSDLARLQKAFP---------QGRTLDK-DPCTIQEWN-EGKIPL-LFAH 115 +++ L L + G + + +N EG Sbjct: 426 GNRVLIFSQMVRMLDILAEYLKYRQFPFQRLDGSIKGELRKQALDHFNAEGSEDFCFLLS 485 Query: 116 PASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNT 175 + G G+NL + +V F W+ + Q R + G K+ V +Y L+ + + Sbjct: 486 TRAGGLGINL-ASADTVVIFDSDWNPQNDLQAQAR-----AHRIGQKKQVNIYRLVTKGS 539 Query: 176 IDELVLQRLRTKSTIQDLL---LNALKKETIHV 205 ++E +L+R + K + L+ ++ K +H Sbjct: 540 VEEDILERAKKKMVLDHLVIQRMDTTGKTVLHT 572 >gi|73951145|ref|XP_859323.1| PREDICTED: similar to Chromodomain-helicase-DNA-binding protein 2 (CHD-2) isoform 11 [Canis familiaris] Length = 1820 Score = 92.3 bits (228), Expect = 4e-17, Method: Composition-based stats. Identities = 25/161 (15%), Positives = 59/161 (36%), Gaps = 20/161 (12%) Query: 52 HDEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQKAF---------PQGRTLDK-DPC 99 K+ L+ ++ + +++ L L + G + Sbjct: 789 SSGKLILLDKLLTRLRERGNRVLIFSQMVRMLDILAEYLTIKHYPFQRLDGSIKGEIRKQ 848 Query: 100 TIQEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 + +N + + G G+NL + +V F W+ + Q R Sbjct: 849 ALDHFNADGSEDFCFLLSTRAGGLGINL-ASADTVVIFDSDWNPQNDLQAQAR-----AH 902 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNAL 198 + G K+ V +Y L+ + T++E +++R + K + L++ + Sbjct: 903 RIGQKKQVNIYRLVTKGTVEEEIIERAKKKMVLDHLVIQRM 943 >gi|241720419|ref|XP_002413614.1| E1A-binding protein p400, putative [Ixodes scapularis] gi|215507430|gb|EEC16922.1| E1A-binding protein p400, putative [Ixodes scapularis] Length = 2377 Score = 92.3 bits (228), Expect = 4e-17, Method: Composition-based stats. Identities = 27/156 (17%), Positives = 60/156 (38%), Gaps = 23/156 (14%) Query: 55 KIKALEVIIEKANA--APIIVAYHFNSDLARLQK----------AFPQGRTLDKDPCTIQ 102 K++ L+ ++ + +++ L L++ +D+ ++ Sbjct: 1166 KLQVLDRLLWQLRGGQHRVLIFTQMTRMLDILEQFLNYHGHTYLRLDGSTRVDQRQALME 1225 Query: 103 EWNEGK-IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGF 161 +N + I S G G+NL G + +VF+ W+ Q +R + G Sbjct: 1226 RFNADRRIFCFILSTRSGGIGVNLT-GADTVVFYDSDWNPTMDAQAQDRC-----HRIGQ 1279 Query: 162 KRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 R V +Y T++E +L++ K + D+ + Sbjct: 1280 TRDVHIYR----QTVEENILKKATQKRMLGDVAIEG 1311 >gi|219122221|ref|XP_002181449.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1] gi|217407435|gb|EEC47372.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1] Length = 707 Score = 92.3 bits (228), Expect = 4e-17, Method: Composition-based stats. Identities = 35/180 (19%), Positives = 62/180 (34%), Gaps = 35/180 (19%) Query: 52 HDEKIKAL-EVIIEKANAAP---IIVAYHFNSDLA-------------------RLQKAF 88 KI+ L + ++ P +V F + L R+ Sbjct: 529 TSSKIEVLVQELVAMRKGRPGSKALVFSQFVNMLDLTRWRIHSDPCLADLGLGVRILHGG 588 Query: 89 PQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMI 148 ++ D +E + + +L + G LNL + + WW+ Q I Sbjct: 589 MDVKSRDATLQAFRE--DPSVRVLLMSLKAGGVALNLTV-ASEVYLLDNWWNPAAEMQAI 645 Query: 149 ERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL----NALKKETIH 204 +R + G R + IA+ T++E VLQ K + D + +LK T+H Sbjct: 646 DR-----THRLGQYRPIRAVRFIAEGTVEERVLQLQEKKRLVFDGTVGRDAGSLKMLTVH 700 >gi|156552758|ref|XP_001599976.1| PREDICTED: similar to ENSANGP00000008413 [Nasonia vitripennis] Length = 1890 Score = 92.3 bits (228), Expect = 4e-17, Method: Composition-based stats. Identities = 33/150 (22%), Positives = 60/150 (40%), Gaps = 31/150 (20%) Query: 56 IKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCT--------IQEWN-E 106 +KA+ I+E DL R+ P L D + +N + Sbjct: 1682 LKAMLDIVE--------------HDLLRM--HLPTVTYLRLDGSVPAALRHSVVARFNAD 1725 Query: 107 GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVF 166 I +L G GLNL G + ++F W+ + Q ++R + G K+ V Sbjct: 1726 PSIDVLLLTTQVGGLGLNLT-GADTVIFVEHDWNPMKDLQAMDR-----AHRIGQKKVVN 1779 Query: 167 VYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 VY LI + T++E ++ + K + +++ Sbjct: 1780 VYRLITRQTVEEKIMGLQKFKLLTANTIIS 1809 >gi|327264196|ref|XP_003216901.1| PREDICTED: chromodomain-helicase-DNA-binding protein 1-like [Anolis carolinensis] Length = 887 Score = 92.3 bits (228), Expect = 4e-17, Method: Composition-based stats. Identities = 30/165 (18%), Positives = 65/165 (39%), Gaps = 19/165 (11%) Query: 45 EKHWKEVHDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAFP---------QGRT 93 H EV K+ L+ ++ A +++ + L LQ G Sbjct: 328 GDHLIEV-SGKLNLLDNLLAFLYAGGHRVLLFSQMTNMLDILQDYMDYRGYSYERLDGSV 386 Query: 94 LDKDPC-TIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIG 152 ++ I+ + + I + + G G+NL + +VF ++ + Q I R Sbjct: 387 RGEERHLAIKNFGQQPIFVFLLSTRAGGVGMNLT-SADTVVFVDNDFNPQNDLQAIAR-- 443 Query: 153 VTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + G + V + LI ++TI+E++ +R +K + + ++ Sbjct: 444 ---AHRIGQNKPVKIIRLIGRDTIEEIIYRRAASKLQLTNTIIEG 485 >gi|325181909|emb|CCA16363.1| ChromodomainhelicaseDNAbinding protein 8 putative [Albugo laibachii Nc14] Length = 2334 Score = 92.3 bits (228), Expect = 4e-17, Method: Composition-based stats. Identities = 20/144 (13%), Positives = 48/144 (33%), Gaps = 18/144 (12%) Query: 65 KANAAPIIVAYHFNSDLARLQ----------KAFPQGRTLDKDPCTIQEWNEGKIP--LL 112 +A I++ F L ++ + + I +N K Sbjct: 1549 RAEEKKILIFSQFKMMLDVIEDLCHLRGYQIERMDGSVRGNLRQAAIDRFNNPKSDTFAF 1608 Query: 113 FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIA 172 + G G+NL ++++ + W+ + Q + R + G ++V +Y L+ Sbjct: 1609 LLSTRAGGVGINL-IAASVVILYDSDWNPQNDLQAVARC-----HRIGQTKSVNIYRLVT 1662 Query: 173 QNTIDELVLQRLRTKSTIQDLLLN 196 + T + + K + + Sbjct: 1663 KKTYEAQMFDIASKKLGMHHAVFE 1686 >gi|319441078|ref|ZP_07990234.1| putative DNA/RNA helicase [Corynebacterium variabile DSM 44702] Length = 1050 Score = 92.3 bits (228), Expect = 4e-17, Method: Composition-based stats. Identities = 30/190 (15%), Positives = 67/190 (35%), Gaps = 24/190 (12%) Query: 26 ASKTVKCLQLANGAVYYDEEKHWKEVH----DEKIKALEVIIEKA--NAAPIIVAYHFNS 79 + ++ N ++ + K++ L I+ +A ++V F S Sbjct: 795 LTALTHFKEICNHPAHFSGDGSGIRKDGRHRSGKVERLYRIVAEALEQDRRVLVFTQFPS 854 Query: 80 ----------DLARLQKAFPQGRTLDKDPCT-IQEWNEGKIP-LLFAHPASCGHGLNLQY 127 ++ ++ G K + + P ++ + G G+ L Sbjct: 855 FGRMLAPDMEEVFGIEVPMLHGGLNRKARVDLVNRFQSENGPKVMILSTRAGGTGITLTR 914 Query: 128 GGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTK 187 ++++ WW+ Q +R + G + V V+ LIA T+DE + L K Sbjct: 915 -ASVVIHIDRWWNPAVEDQATDR-----AYRIGQGQDVRVHKLIAVGTLDERINDILGAK 968 Query: 188 STIQDLLLNA 197 + +++A Sbjct: 969 RDLAGDVVSA 978 >gi|145611352|ref|XP_368791.2| hypothetical protein MGG_00453 [Magnaporthe oryzae 70-15] gi|145018655|gb|EDK02934.1| hypothetical protein MGG_00453 [Magnaporthe oryzae 70-15] Length = 901 Score = 92.3 bits (228), Expect = 4e-17, Method: Composition-based stats. Identities = 34/175 (19%), Positives = 69/175 (39%), Gaps = 20/175 (11%) Query: 45 EKHWKEVHDEKIKALEVII-EKANAAPIIVAYHFNSDLARL-----QKAFPQGRTLDKDP 98 E++ + V KI+ L I+ ++ + IV F S L + ++ F R Sbjct: 682 EENGRVVPSAKIRQLLEILHKEVHEHKFIVFSQFTSMLDLVAPFFDREGFKYTRYEGSMK 741 Query: 99 CTIQEW------NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIG 152 ++E N+ K +L GLNL +++ +W+ +Q I+R+ Sbjct: 742 NDLREESLHSLRNDPKTRILLCSLKCGSLGLNLTAATRVVIL-EPFWNPFVEEQAIDRV- 799 Query: 153 VTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA--LKKETIHV 205 + V VY L +++E +L+ K + + + KK+ + + Sbjct: 800 ----HRLTQTVDVIVYKLTVGKSVEERILELQNKKRMLAEQAIEGGMKKKDALKL 850 >gi|157116391|ref|XP_001658454.1| helicase [Aedes aegypti] gi|108876505|gb|EAT40730.1| helicase [Aedes aegypti] Length = 814 Score = 92.3 bits (228), Expect = 4e-17, Method: Composition-based stats. Identities = 28/181 (15%), Positives = 67/181 (37%), Gaps = 21/181 (11%) Query: 31 KCLQLANGAVYYDEEKHWKE--VHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQK 86 K LQL + + + V K + L+ ++ K +++ F L ++K Sbjct: 595 KLLQLKEKYTSLYDLRIPDQLIVASGKFRQLDELLPKLKREGHRVLIFSQFVMMLDIMEK 654 Query: 87 AFP---------QGRTLDKDPCTIQE--WNEGKIPLLFAHPASCGHGLNLQYGGNILVFF 135 G+T + + + + I + + G G+NL +++ Sbjct: 655 YLDIRHYGFLRLDGQTAVTERQEMIDLYNQDPNIFIFLLSTKAGGLGINLTAADTVIIHD 714 Query: 136 SLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 + ++ R + G + V +Y L+++ TI+E +L + K ++ + Sbjct: 715 ------IDFNPYNDKQAEDRSHRMGQTKPVTIYKLVSEGTIEEGMLMIAQEKLQLEKDVT 768 Query: 196 N 196 + Sbjct: 769 D 769 >gi|12853471|dbj|BAB29753.1| unnamed protein product [Mus musculus] Length = 473 Score = 92.3 bits (228), Expect = 4e-17, Method: Composition-based stats. Identities = 27/153 (17%), Positives = 56/153 (36%), Gaps = 21/153 (13%) Query: 68 AAPIIVAYHFNSDLARLQKAFP---------QGRTLDK-DPCTIQEWN-EGKIPL-LFAH 115 +++ L L + G + + +N EG Sbjct: 144 GNRVLIFSQMVRMLDILAEYLKYRQFPFQRLDGSIKGELRKQALDHFNAEGSEDFCFLLS 203 Query: 116 PASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNT 175 + G G+NL + +V F W+ + Q R + G K+ V +Y L+ + + Sbjct: 204 TRAGGLGINL-ASADTVVIFDSDWNPQNDLQAQAR-----AHRIGQKKQVNIYRLVTKGS 257 Query: 176 IDELVLQRLRTKSTIQDLL---LNALKKETIHV 205 ++E +L+R + K + L+ ++ K +H Sbjct: 258 VEEDILERAKKKMVLDHLVIQRMDTTGKTVLHT 290 >gi|221480872|gb|EEE19293.1| transcription regulatory protein SNF2, putative [Toxoplasma gondii GT1] gi|221501605|gb|EEE27375.1| transcription regulatory protein SNF2, putative [Toxoplasma gondii VEG] Length = 1200 Score = 92.3 bits (228), Expect = 4e-17, Method: Composition-based stats. Identities = 35/219 (15%), Positives = 82/219 (37%), Gaps = 31/219 (14%) Query: 2 KQYHKFQRELYCDLQGENIEA-FNSASKTVKCLQLANGAVYYDE---------EKHWKEV 51 + Y + LQG + ++ + N +D +H E Sbjct: 526 QLYKDLLTKNVAALQGAEGAGRTQLLNLAMQLRKACNHPYLFDGYESEHADPFGEHVIE- 584 Query: 52 HDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQ-----KAFPQGRTL-----DKDPC 99 + K++ + ++ + ++ + L+ + F R D+ Sbjct: 585 NAGKLRFCDRLLRRLIQENRRCLIFTQMTKMIDILEDYCRIRLFKYCRIDGNTSGDERDR 644 Query: 100 TIQEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 I+ +N IP+ + G G+NL + ++ + W+ + Q ++R+ Sbjct: 645 QIEAFNAPGSDIPIFLLSTRAGGLGINL-ATADTVILYDSDWNPQVDLQAMDRV-----H 698 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + G K AV VY L+ ++TI++ +++R K + ++ Sbjct: 699 RIGQKSAVNVYRLVHEHTIEQKIIERAMLKLQLDTAIIQ 737 >gi|109088973|ref|XP_001107536.1| PREDICTED: DNA excision repair protein ERCC-6 [Macaca mulatta] Length = 1496 Score = 92.3 bits (228), Expect = 4e-17, Method: Composition-based stats. Identities = 36/172 (20%), Positives = 63/172 (36%), Gaps = 21/172 (12%) Query: 43 DEEKHWKEVHDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQK----------AFPQ 90 D+ +WK K+ +E +++ +++ L L+ Sbjct: 833 DQFGYWKR--SGKMIVVESLLKIWHKQGQRVLLFSQSRQMLDILEVFLRAQKYTYLKMDG 890 Query: 91 GRTLDKDPCTIQEWNEG-KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIE 149 T+ I +NE I + G G+NL G N +V + W+ Q E Sbjct: 891 TTTIASRQPLITRYNEDTSIFVFLLTTRVGGLGVNLT-GANRVVIYDPDWNPSTDTQARE 949 Query: 150 RIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 R + G K+ V VY L+ TI+E + R K + + +L K+ Sbjct: 950 RAW-----RIGQKKQVTVYRLLTAGTIEEKIYHRQIFKQFLTNRVLKDPKQR 996 >gi|73951139|ref|XP_859203.1| PREDICTED: similar to Chromodomain-helicase-DNA-binding protein 2 (CHD-2) isoform 8 [Canis familiaris] Length = 1839 Score = 92.3 bits (228), Expect = 4e-17, Method: Composition-based stats. Identities = 25/161 (15%), Positives = 59/161 (36%), Gaps = 20/161 (12%) Query: 52 HDEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQKAF---------PQGRTLDK-DPC 99 K+ L+ ++ + +++ L L + G + Sbjct: 774 SSGKLILLDKLLTRLRERGNRVLIFSQMVRMLDILAEYLTIKHYPFQRLDGSIKGEIRKQ 833 Query: 100 TIQEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 + +N + + G G+NL + +V F W+ + Q R Sbjct: 834 ALDHFNADGSEDFCFLLSTRAGGLGINL-ASADTVVIFDSDWNPQNDLQAQAR-----AH 887 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNAL 198 + G K+ V +Y L+ + T++E +++R + K + L++ + Sbjct: 888 RIGQKKQVNIYRLVTKGTVEEEIIERAKKKMVLDHLVIQRM 928 >gi|195591505|ref|XP_002085481.1| GD14801 [Drosophila simulans] gi|194197490|gb|EDX11066.1| GD14801 [Drosophila simulans] Length = 893 Score = 92.3 bits (228), Expect = 4e-17, Method: Composition-based stats. Identities = 24/154 (15%), Positives = 58/154 (37%), Gaps = 22/154 (14%) Query: 52 HDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQKAFPQGRTL-----------DKDP 98 K+ L ++++ + +++ L + + F +G D Sbjct: 585 ASGKLDLLSKMLKQLKKDNHRVLLFSQMTKMLN-ILEHFLEGEGYQYDRIDGAIRGDLRQ 643 Query: 99 CTIQEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 I +N+ + + + G G+NL + ++ F W+ Q +R Sbjct: 644 KAIDRFNDPGSEQFVFLLSTRAGGLGINL-ATADTVIIFDSDWNPHNDVQA-----FSRA 697 Query: 157 RQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 + G K+ V +Y + N+++E ++Q + K + Sbjct: 698 HRMGQKKKVMIYRFVTHNSVEERIMQVAKRKMML 731 >gi|171688350|ref|XP_001909115.1| hypothetical protein [Podospora anserina S mat+] gi|170944137|emb|CAP70247.1| unnamed protein product [Podospora anserina S mat+] Length = 961 Score = 92.3 bits (228), Expect = 4e-17, Method: Composition-based stats. Identities = 31/156 (19%), Positives = 58/156 (37%), Gaps = 20/156 (12%) Query: 49 KEVHDEKIKALEVIIEKA---NAAPIIVAYHFNSDLARLQKAFPQGR-----------TL 94 +E K +AL I++ + +I+ + S L +Q+ + Sbjct: 784 RETKSSKTEALLKILQATLKKEGSKVIIFSQWTSFLNVIQRQLDEAGYTYTRIDGSMNAT 843 Query: 95 DKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 +D + ++ A A C GLNL + +V WW Q ++R+ Sbjct: 844 KRDVAIKALDEDPNTRIMLASLAVCSVGLNL-VSADTVVLADSWWAPAIEDQAVDRV--- 899 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 + G R V+ L+ + T++E VL K + Sbjct: 900 --HRLGQTRETTVWRLVMEGTVEERVLDIQAEKREL 933 >gi|281211743|gb|EFA85905.1| SNF2-related domain-containing protein [Polysphondylium pallidum PN500] Length = 1675 Score = 92.3 bits (228), Expect = 4e-17, Method: Composition-based stats. Identities = 32/160 (20%), Positives = 64/160 (40%), Gaps = 20/160 (12%) Query: 52 HDEKIKALEVII--EKANAAPIIVAYHFNSDLARLQKAF---------PQGRTL-DKDPC 99 K ++ I+ KA+ +++ + + + F G T ++ Sbjct: 984 ASGKFDMMDQILIKMKASGHRVLIFTQMTEIINIMVEYFSIRDWGYLRLDGSTKPEERSR 1043 Query: 100 TIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 + EWN P + + G G+NLQ + ++ F W+ + Q +R Sbjct: 1044 LVVEWNRKDSPYFIFVLSTHAGGLGMNLQT-ADTVIIFDSDWNPQMDLQAQDRC-----H 1097 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + G V V+ LI+ +TI+E +L+R K + ++ A Sbjct: 1098 RVGQVNRVNVFRLISASTIEERILERATDKLDLDAKIIQA 1137 >gi|255076351|ref|XP_002501850.1| SNF2 super family [Micromonas sp. RCC299] gi|226517114|gb|ACO63108.1| SNF2 super family [Micromonas sp. RCC299] Length = 1989 Score = 92.3 bits (228), Expect = 4e-17, Method: Composition-based stats. Identities = 38/181 (20%), Positives = 63/181 (34%), Gaps = 26/181 (14%) Query: 14 DLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIV 73 DL G + A LA+ H V + +A+ ++E A A Sbjct: 777 DLGGAPDASGKCAFLMSLLRHLASS-------GHRTLVFSQS-RAMLDVLESAARAD--- 825 Query: 74 AYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNE-GKIPLLFAHPASCGHGLNLQYGGNIL 132 DL R+ P D+ ++ + IPL G GL L + + Sbjct: 826 ----GHDLVRIDGKVP----ADERHARVERFQSTPSIPLALLTSQVGGLGLTLT-AADRV 876 Query: 133 VFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQD 192 V + W+ Q ++R + G + V VY L+ T++E V +R K + Sbjct: 877 VIYDPAWNPAADSQSVDR-----AYRIGQTKDVVVYRLVTCGTVEEKVYRRQVFKGGLSR 931 Query: 193 L 193 Sbjct: 932 A 932 >gi|238504030|ref|XP_002383247.1| TBP associated factor (Mot1), putative [Aspergillus flavus NRRL3357] gi|220690718|gb|EED47067.1| TBP associated factor (Mot1), putative [Aspergillus flavus NRRL3357] Length = 1663 Score = 92.3 bits (228), Expect = 4e-17, Method: Composition-based stats. Identities = 32/163 (19%), Positives = 63/163 (38%), Gaps = 18/163 (11%) Query: 35 LANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTL 94 L GA Y + ++K + I++ ++ + + Sbjct: 1434 LGTGASYVSPHRALIF---CQMKEMLDIVQSEVLKKLLPSVQYL--------RLDGSVEA 1482 Query: 95 DKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGV 153 K + +N + L + G GLNL G + ++F W+ ++ Q ++R Sbjct: 1483 TKRQDIVNRFNTDPSYDALLLTTSVGGLGLNLT-GADTVIFVEHDWNPQKDIQAMDR--- 1538 Query: 154 TRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + G K+ V VY LI + T++E +L R K + ++N Sbjct: 1539 --AHRIGQKKVVNVYRLITRGTLEEKILNLQRFKIDVASTVVN 1579 >gi|268574810|ref|XP_002642384.1| Hypothetical protein CBG18388 [Caenorhabditis briggsae] Length = 1016 Score = 92.3 bits (228), Expect = 4e-17, Method: Composition-based stats. Identities = 26/156 (16%), Positives = 61/156 (39%), Gaps = 19/156 (12%) Query: 57 KALEVIIEKANAAPIIVAYHFNSDLARLQ----------KAFPQGRTLDKDPCTIQEWN- 105 K L I + +++ F S L L+ K + I E+N Sbjct: 798 KMLPEI--QNKGDKVLIFSQFTSMLDILEVYLNIRGYSYKRLDGQTPVLDRQEMINEFNL 855 Query: 106 EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 + + + G G+NL +I++ + ++ +Q +R + G ++ V Sbjct: 856 SKDLFVFLLSTKAGGLGINLTSANHIIIH-DIDFNPYNDKQAEDRC-----HRMGQEKPV 909 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 V L+++ T++ +L + K ++ + + +K + Sbjct: 910 HVTRLVSKCTVEIGMLALAKKKLQLEKQVTDGVKGQ 945 >gi|19111970|ref|NP_595178.1| ATP-dependent DNA helicase Rhp16b (predicted) [Schizosaccharomyces pombe 972h-] gi|1723497|sp|Q10332|YBMA_SCHPO RecName: Full=Uncharacterized ATP-dependent helicase C582.10c gi|5420446|emb|CAB46673.1| ATP-dependent DNA helicase Rhp16b (predicted) [Schizosaccharomyces pombe] Length = 830 Score = 92.3 bits (228), Expect = 4e-17, Method: Composition-based stats. Identities = 29/147 (19%), Positives = 55/147 (37%), Gaps = 21/147 (14%) Query: 69 APIIVAYHFNSDLARLQKAFPQG-------------RTLDKDPCTIQEWNEGKIPLLFAH 115 I+ F + L + + R +K ++ + +L Sbjct: 671 RKTIIFSQFTTFLDIIDLHLRKAGIGFVRYDGRMNNRAREKSLDLLRS--DSGTQVLLCS 728 Query: 116 PASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNT 175 GLNL + ++ +WW+ +Q I+R+ + G +R V VY L+ +NT Sbjct: 729 LKCGALGLNLTC-ASRVILCDVWWNPAIEEQAIDRV-----HRIGQRRDVLVYKLVVENT 782 Query: 176 IDELVLQRLRTKSTIQDLLLNALKKET 202 I+E +++ K + L KK Sbjct: 783 IEEKIVELQNLKRDLAKQALGDGKKSV 809 >gi|326479756|gb|EGE03766.1| SNF2 family helicase [Trichophyton equinum CBS 127.97] Length = 1050 Score = 92.3 bits (228), Expect = 4e-17, Method: Composition-based stats. Identities = 29/158 (18%), Positives = 58/158 (36%), Gaps = 18/158 (11%) Query: 52 HDEKIKALEVIIEKANAA-PIIVAYHFNSDLARLQKAFPQG-----------RTLDKDPC 99 KI+ L ++++ + IV F S L +++ G R ++ Sbjct: 808 TSAKIRHLMRVLKRESGQFKFIVFSVFTSMLDKIEPFLKNGGIGYARYDGGMRNDLREAS 867 Query: 100 TIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQA 159 + N +L + GLNL + +V +W+ +Q I+R+ + Sbjct: 868 LNRLRNSSGTRVLLCSLRAGSLGLNLT-AASRVVILEPFWNPFVEEQAIDRV-----HRL 921 Query: 160 GFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 V VY L + T++E +L+ K + + Sbjct: 922 NQTIDVKVYKLTIKGTVEERILELQERKRELAKSAIEG 959 >gi|255956043|ref|XP_002568774.1| Pc21g17780 [Penicillium chrysogenum Wisconsin 54-1255] gi|211590485|emb|CAP96675.1| Pc21g17780 [Penicillium chrysogenum Wisconsin 54-1255] Length = 1331 Score = 92.3 bits (228), Expect = 4e-17, Method: Composition-based stats. Identities = 35/154 (22%), Positives = 59/154 (38%), Gaps = 25/154 (16%) Query: 59 LEVIIEKA--NAAPIIVAYHFNSDLARLQKAFPQGR-----------TLDKDPCTIQEWN 105 L II +A I+V L L + + + T + N Sbjct: 1090 LNEIINQAIAVGDKILVFSSSIPTLNYLAQVMEKTQRKYALLEGTIPTTKRLELVRGFNN 1149 Query: 106 EGKIPLLFAHPASCGHGLNLQYGGNILVF---FSLWWDLEEHQQMIERIGVTRQRQAGFK 162 + + + G GLN+Q +++F F+ W +Q I R + G K Sbjct: 1150 DPSTYVFLISTKAGGVGLNIQTANRVVIFDFEFNPTW----EEQAIGR-----AYRIGQK 1200 Query: 163 RAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + VFVY L+A T++E + + KS + LL+ Sbjct: 1201 KKVFVYRLVAAGTVEEKIFCKATFKSQLAGRLLD 1234 >gi|189192520|ref|XP_001932599.1| ISWI chromatin-remodeling complex ATPase ISW2 [Pyrenophora tritici-repentis Pt-1C-BFP] gi|187974205|gb|EDU41704.1| ISWI chromatin-remodeling complex ATPase ISW2 [Pyrenophora tritici-repentis Pt-1C-BFP] Length = 1002 Score = 92.3 bits (228), Expect = 4e-17, Method: Composition-based stats. Identities = 41/231 (17%), Positives = 88/231 (38%), Gaps = 43/231 (18%) Query: 6 KFQRELYCDLQGENIEAFNSAS--------KTVKCLQLAN-------------GAVYYDE 44 Q + Y + ++I+A N + +QL G Y + Sbjct: 437 DMQVQWYKKILEKDIDAVNGGAGNKESKTRLLNIVMQLRKCCNHPYLFEGAEPGPPYTTD 496 Query: 45 EKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARL---------QKAFPQGRT 93 E + K+ L+ ++++ A + +++ + L + Q G T Sbjct: 497 EHLV--TNAAKMVMLDKLLKRMKAQGSRVLIFSQMSRVLDIMEDYSVMRGYQYCRIDGST 554 Query: 94 LDKDP-CTIQEWNE--GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 +D I ++N+ + L + G G+NL +I+V F W+ + Q ++R Sbjct: 555 AHEDRIQAIDDYNKEGSEKFLFLLTTRAGGLGINLT-SADIVVLFDSDWNPQADLQAMDR 613 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 + G + V+V+ + + I+E VL+R K + L++ + + Sbjct: 614 -----AHRIGQTKQVYVFRFVTEMAIEEKVLERAAQKLRLDQLVIQQGRTQ 659 >gi|156051220|ref|XP_001591571.1| hypothetical protein SS1G_07017 [Sclerotinia sclerotiorum 1980] gi|154704795|gb|EDO04534.1| hypothetical protein SS1G_07017 [Sclerotinia sclerotiorum 1980 UF-70] Length = 1410 Score = 92.3 bits (228), Expect = 4e-17, Method: Composition-based stats. Identities = 31/159 (19%), Positives = 65/159 (40%), Gaps = 20/159 (12%) Query: 55 KIKALEVIIE--KANAAPIIVAYHFNS---------DLARLQKAFPQGRTL-DKDPCTIQ 102 K + L+ I+ +A +++ + + D ++ G T D ++ Sbjct: 843 KFELLDRILPKYQATGHRVLMFFQMTAIMDIMGEFLDYRGIKFMRLDGTTKSDDRSLLLK 902 Query: 103 EWNEGKIPLL--FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 E+N P + G GLNLQ + ++ + W+ + Q R + G Sbjct: 903 EFNAPDSPYFCFLLSTRAGGLGLNLQT-ADTVIIYDSDWNPHQDLQA-----QDRAHRIG 956 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 K V + LI+ N+++E +L+R + K + ++ A + Sbjct: 957 QKNEVRILRLISSNSVEEKILERAKFKLDMDGKVIQAGR 995 >gi|119622570|gb|EAX02165.1| chromodomain helicase DNA binding protein 2, isoform CRA_d [Homo sapiens] Length = 1857 Score = 92.3 bits (228), Expect = 4e-17, Method: Composition-based stats. Identities = 25/161 (15%), Positives = 59/161 (36%), Gaps = 20/161 (12%) Query: 52 HDEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQKAF---------PQGRTLDK-DPC 99 K+ L+ ++ + +++ L L + G + Sbjct: 753 SSGKLILLDKLLTRLRERGNRVLIFSQMVRMLDILAEYLTIKHYPFQRLDGSIKGEIRKQ 812 Query: 100 TIQEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 + +N + + G G+NL + +V F W+ + Q R Sbjct: 813 ALDHFNADGSEDFCFLLSTRAGGLGINL-ASADTVVIFDSDWNPQNDLQAQAR-----AH 866 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNAL 198 + G K+ V +Y L+ + T++E +++R + K + L++ + Sbjct: 867 RIGQKKQVNIYRLVTKGTVEEEIIERAKKKMVLDHLVIQRM 907 >gi|73951147|ref|XP_859355.1| PREDICTED: similar to Chromodomain-helicase-DNA-binding protein 2 (CHD-2) isoform 12 [Canis familiaris] Length = 1851 Score = 92.3 bits (228), Expect = 4e-17, Method: Composition-based stats. Identities = 25/161 (15%), Positives = 59/161 (36%), Gaps = 20/161 (12%) Query: 52 HDEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQKAF---------PQGRTLDK-DPC 99 K+ L+ ++ + +++ L L + G + Sbjct: 789 SSGKLILLDKLLTRLRERGNRVLIFSQMVRMLDILAEYLTIKHYPFQRLDGSIKGEIRKQ 848 Query: 100 TIQEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 + +N + + G G+NL + +V F W+ + Q R Sbjct: 849 ALDHFNADGSEDFCFLLSTRAGGLGINL-ASADTVVIFDSDWNPQNDLQAQAR-----AH 902 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNAL 198 + G K+ V +Y L+ + T++E +++R + K + L++ + Sbjct: 903 RIGQKKQVNIYRLVTKGTVEEEIIERAKKKMVLDHLVIQRM 943 >gi|238624120|ref|NP_001121770.2| chromodomain helicase DNA binding protein 1 [Danio rerio] Length = 1693 Score = 92.3 bits (228), Expect = 4e-17, Method: Composition-based stats. Identities = 26/171 (15%), Positives = 63/171 (36%), Gaps = 23/171 (13%) Query: 52 HDEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQKAFPQGRTL----------DKDPC 99 K+ L+ ++ + +++ L L + + L + Sbjct: 773 SSGKLILLDKLLVRLKERGHRVLIFSQMVRMLDILAEYLKYRQFLFQRLDGSIKGEMRKQ 832 Query: 100 TIQEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 + +N + + G G+NL + +V F W+ + Q R Sbjct: 833 ALDHFNADGSEDFCFLLSTRAGGLGINL-ASADTVVIFDSDWNPQNDLQAQAR-----AH 886 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL---LNALKKETIHV 205 + G K+ V +Y L+ + +++E +++R + K + L+ ++ K +H Sbjct: 887 RIGQKKQVNIYRLVTKGSVEEEIIERAKKKMVLDHLVIQRMDTTGKTVLHT 937 >gi|67604075|ref|XP_666591.1| RIKEN cDNA A730019I05 gene [Cryptosporidium hominis TU502] gi|54657614|gb|EAL36361.1| RIKEN cDNA A730019I05 gene [Cryptosporidium hominis] Length = 2267 Score = 92.3 bits (228), Expect = 4e-17, Method: Composition-based stats. Identities = 27/143 (18%), Positives = 47/143 (32%), Gaps = 18/143 (12%) Query: 65 KANAAPIIVAYHFNSDLARLQKAFP---------QGRTLDKDP-CTIQEWNEGKIP--LL 112 KA +++ F L L++ G D I +N + Sbjct: 1710 KAEGHRVLIFSQFIQTLTLLEELVEHHGWGYERLDGSIRGTDRNAAITRFNAEDSDKFVF 1769 Query: 113 FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIA 172 + G G+NL + ++ F W+ + Q R + G R V VY LI Sbjct: 1770 LLSTRAGGLGINLT-SADTVIIFDSDWNPQNDVQACAR-----AHRIGQTRDVKVYRLIT 1823 Query: 173 QNTIDELVLQRLRTKSTIQDLLL 195 T + + +R K + + Sbjct: 1824 ARTYEAEMFERAGRKLGLNTAVF 1846 >gi|320034534|gb|EFW16478.1| helicase SWR1 [Coccidioides posadasii str. Silveira] Length = 957 Score = 91.9 bits (227), Expect = 4e-17, Method: Composition-based stats. Identities = 37/168 (22%), Positives = 66/168 (39%), Gaps = 22/168 (13%) Query: 39 AVYYDEEKHWK--EVHDEKIKALEVIIEK---ANAAPIIVAYHFNSDLARLQKAFPQ--- 90 A+ D+ K E KI+AL I+ A + +V + S L ++ + Sbjct: 768 ALGEDDSKVDVDPEESSSKIQALIKILTAQGQAPGSKTVVFSQWTSFLDLIEPQLVKHNI 827 Query: 91 --GRTLDKDPCTIQEW------NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLE 142 R K T ++ N+ ++ A C GLNL N ++ WW Sbjct: 828 TFTRIDGKRSSTKRDVAMATLTNDPNCTVMLASLNVCSVGLNL-VAANQVILTDSWWAPA 886 Query: 143 EHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 Q ++R+ + G KR V+ L+ + +I++ VL + K + Sbjct: 887 IEDQAVDRV-----YRLGQKRPTTVWRLVMEGSIEDRVLDIQKRKRDL 929 >gi|303318791|ref|XP_003069395.1| SNF2 family N-terminal domain containing protein [Coccidioides posadasii C735 delta SOWgp] gi|240109081|gb|EER27250.1| SNF2 family N-terminal domain containing protein [Coccidioides posadasii C735 delta SOWgp] Length = 956 Score = 91.9 bits (227), Expect = 4e-17, Method: Composition-based stats. Identities = 37/168 (22%), Positives = 66/168 (39%), Gaps = 22/168 (13%) Query: 39 AVYYDEEKHWK--EVHDEKIKALEVIIEK---ANAAPIIVAYHFNSDLARLQKAFPQ--- 90 A+ D+ K E KI+AL I+ A + +V + S L ++ + Sbjct: 767 ALGEDDSKVDVDPEESSSKIQALIKILTAQGQAPGSKTVVFSQWTSFLDLIEPQLVKHNI 826 Query: 91 --GRTLDKDPCTIQEW------NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLE 142 R K T ++ N+ ++ A C GLNL N ++ WW Sbjct: 827 TFTRIDGKRSSTKRDVAMATLTNDPNCTVMLASLNVCSVGLNL-VAANQVILTDSWWAPA 885 Query: 143 EHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 Q ++R+ + G KR V+ L+ + +I++ VL + K + Sbjct: 886 IEDQAVDRV-----YRLGQKRPTTVWRLVMEGSIEDRVLDIQKRKRDL 928 >gi|224013614|ref|XP_002296471.1| chromodomain-helicase [Thalassiosira pseudonana CCMP1335] gi|220968823|gb|EED87167.1| chromodomain-helicase [Thalassiosira pseudonana CCMP1335] Length = 690 Score = 91.9 bits (227), Expect = 4e-17, Method: Composition-based stats. Identities = 26/159 (16%), Positives = 56/159 (35%), Gaps = 19/159 (11%) Query: 50 EVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARL---------QKAFPQGRTL-DKD 97 + K+ L+ ++ K +++ F L + + GR ++ Sbjct: 418 VMSSGKMVLLDKLLPKLRQEGHKVLIFSQFVKMLDLISDYCDFREFRYERLDGRVRGNER 477 Query: 98 PCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 I + E + + G G+NL +I + F W+ + Q R Sbjct: 478 QKAIDRFETEKDSFVFLLSTRAGGVGINLT-AADICIIFDSDWNPQNDVQAQARC----- 531 Query: 157 RQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 + G + V +Y L+ T ++ + R K ++ +L Sbjct: 532 HRIGQTKDVMIYRLVTSRTFEQEMFDRASKKLGLEQAVL 570 >gi|123495365|ref|XP_001326721.1| F/Y-rich N-terminus family protein [Trichomonas vaginalis G3] gi|121909640|gb|EAY14498.1| F/Y-rich N-terminus family protein [Trichomonas vaginalis G3] Length = 1587 Score = 91.9 bits (227), Expect = 4e-17, Method: Composition-based stats. Identities = 26/146 (17%), Positives = 54/146 (36%), Gaps = 18/146 (12%) Query: 65 KANAAPIIVAYHFNSDLARLQKAF---------PQGRTL-DKDPCTIQEWNEGKIPLL-- 112 K++ I++ + L L+ G+ +K I ++NE L Sbjct: 544 KSDGHRILIFSQMTNLLDILEDYLAMKGYQSCRIDGKVKGEKRQGIIDKFNEPNSELFVC 603 Query: 113 FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIA 172 + G G+NL + ++ F W+ + Q R + G + V VY L+ Sbjct: 604 LLSTRAGGIGINL-NSADTVIIFDSDWNPQNDLQAQARC-----HRIGQTKTVQVYRLLT 657 Query: 173 QNTIDELVLQRLRTKSTIQDLLLNAL 198 + T ++ + K + +L+ + Sbjct: 658 KGTYEQTMFDSASRKLGLGHAILDKM 683 >gi|169607196|ref|XP_001797018.1| hypothetical protein SNOG_06654 [Phaeosphaeria nodorum SN15] gi|111065365|gb|EAT86485.1| hypothetical protein SNOG_06654 [Phaeosphaeria nodorum SN15] Length = 1201 Score = 91.9 bits (227), Expect = 4e-17, Method: Composition-based stats. Identities = 33/162 (20%), Positives = 60/162 (37%), Gaps = 18/162 (11%) Query: 51 VHDEKIKALEVIIEKAN-AAPIIVAYHFNSDLARL-----QKAFPQGRTLDKDPCTIQE- 103 KI+ L I+EK +IV F S L + ++ + R ++E Sbjct: 973 TPSTKIRQLLSILEKETPDHKVIVFSQFTSMLDLIEPFLRRQGYNFTRYDGSMRNDLREA 1032 Query: 104 -----WNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQ 158 + + +L GLNL + +V +W+ +Q I+R+ + Sbjct: 1033 SLHKLREDKRTRVLLCSLKCGSLGLNLT-AASRVVIMEPFWNPFVEEQAIDRV-----HR 1086 Query: 159 AGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKK 200 V VY L N+++E +L+ K + + L K Sbjct: 1087 LNQTVDVTVYRLSIHNSVEERILELQEAKRKLANAALEGGKA 1128 >gi|121701939|ref|XP_001269234.1| chromodomain helicase (Chd1), putative [Aspergillus clavatus NRRL 1] gi|119397377|gb|EAW07808.1| chromodomain helicase (Chd1), putative [Aspergillus clavatus NRRL 1] Length = 1506 Score = 91.9 bits (227), Expect = 4e-17, Method: Composition-based stats. Identities = 30/151 (19%), Positives = 58/151 (38%), Gaps = 20/151 (13%) Query: 51 VHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQKAFP-QGRTLDK---------DP 98 K+ L+ ++ K + +++ L L +G T + Sbjct: 743 TSSGKMMLLDQLLAKLKRDGHRVLIFSQMVKMLDLLGDYMESRGYTYQRLDGTIPAVSRR 802 Query: 99 CTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 I+ +N + G G+NL + +V F W+ + Q + R Sbjct: 803 LAIEHFNAPDSSDFCFLLSTRAGGLGINLMT-ADTVVLFDSDWNPQADLQAMAR-----A 856 Query: 157 RQAGFKRAVFVYYLIAQNTIDELVLQRLRTK 187 + G R V VY L++++T++E V++R R K Sbjct: 857 HRIGQTRPVSVYRLVSKDTVEEEVIERARNK 887 >gi|320586895|gb|EFW99558.1| snf2 family helicase [Grosmannia clavigera kw1407] Length = 1541 Score = 91.9 bits (227), Expect = 4e-17, Method: Composition-based stats. Identities = 33/157 (21%), Positives = 63/157 (40%), Gaps = 19/157 (12%) Query: 51 VHDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAF----------PQGRTLDKDP 98 + K++ L +++ + N +V F L L++ +++ Sbjct: 1009 LQSGKVQELLRLVQKFQKNGDRALVFTRFARVLNILRECMTTSGLDYVSLEGATRVEERQ 1068 Query: 99 CTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 I E+N IP+ S G G+NL N ++ F + ++ Q R Sbjct: 1069 AIIDEFNGNADIPVFLLTTGSGGTGINLT-AANKVIIFDQSDNPQDDVQA-----ENRAH 1122 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 + G R V V L+ + TI+ELV + +TK + + + Sbjct: 1123 RLGQTRDVEVIKLVTRGTIEELVYKACQTKLELAERV 1159 >gi|154303593|ref|XP_001552203.1| hypothetical protein BC1G_08681 [Botryotinia fuckeliana B05.10] gi|150854475|gb|EDN29667.1| hypothetical protein BC1G_08681 [Botryotinia fuckeliana B05.10] Length = 274 Score = 91.9 bits (227), Expect = 4e-17, Method: Composition-based stats. Identities = 33/152 (21%), Positives = 61/152 (40%), Gaps = 20/152 (13%) Query: 53 DEKIKALEVIIEKANAAP---IIVAYHFNSDLARLQKAFPQGRTL-----------DKDP 98 K +AL I++ + P +++ + S L +QK Q +D Sbjct: 100 SSKTEALMQIVKVTHNDPLSKVVIFSQWTSFLNIVQKQLEQAGIKFARIDGSMTAPQRDK 159 Query: 99 CTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQ 158 ++ + +L A A C GLNL + ++ WW Q ++R+ + Sbjct: 160 GMNSLESDPECRILLASLAVCSVGLNL-VAADTVILADSWWAPAIEDQAVDRV-----HR 213 Query: 159 AGFKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 G KR V+ L+ + +I+E VL+ K + Sbjct: 214 LGQKRECKVWRLVMEGSIEERVLEIQGEKRKL 245 >gi|50289791|ref|XP_447327.1| hypothetical protein [Candida glabrata CBS 138] gi|49526637|emb|CAG60264.1| unnamed protein product [Candida glabrata] Length = 1071 Score = 91.9 bits (227), Expect = 4e-17, Method: Composition-based stats. Identities = 33/160 (20%), Positives = 62/160 (38%), Gaps = 17/160 (10%) Query: 44 EEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFN-SDLARLQKAFPQGRT-LDKDPCTI 101 E H + + + L I+E+ F +L+ ++ G T + + Sbjct: 663 SEGHKTLLFTQSRQML-DILEE--------FIKFKEPELSDIRYLRMDGTTSIQVRQTLV 713 Query: 102 QEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGF 161 +N + G G+NL G N ++ + W+ Q ER + G Sbjct: 714 DRFNNESYDVFLLTTRVGGLGVNLT-GANRIIIYDPDWNPSTDLQARERAW-----RIGQ 767 Query: 162 KRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 KR V +Y L+ TI+E + R K + + +L+ K++ Sbjct: 768 KREVSIYRLMISGTIEEKIYHRQIFKQFLMNKVLSDPKQK 807 >gi|73951151|ref|XP_859429.1| PREDICTED: similar to Chromodomain-helicase-DNA-binding protein 2 (CHD-2) isoform 14 [Canis familiaris] Length = 1809 Score = 91.9 bits (227), Expect = 4e-17, Method: Composition-based stats. Identities = 25/161 (15%), Positives = 59/161 (36%), Gaps = 20/161 (12%) Query: 52 HDEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQKAF---------PQGRTLDK-DPC 99 K+ L+ ++ + +++ L L + G + Sbjct: 771 SSGKLILLDKLLTRLRERGNRVLIFSQMVRMLDILAEYLTIKHYPFQRLDGSIKGEIRKQ 830 Query: 100 TIQEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 + +N + + G G+NL + +V F W+ + Q R Sbjct: 831 ALDHFNADGSEDFCFLLSTRAGGLGINL-ASADTVVIFDSDWNPQNDLQAQAR-----AH 884 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNAL 198 + G K+ V +Y L+ + T++E +++R + K + L++ + Sbjct: 885 RIGQKKQVNIYRLVTKGTVEEEIIERAKKKMVLDHLVIQRM 925 >gi|325114415|emb|CBZ49972.1| hypothetical protein NCLIV_004490 [Neospora caninum Liverpool] Length = 1317 Score = 91.9 bits (227), Expect = 4e-17, Method: Composition-based stats. Identities = 40/223 (17%), Positives = 84/223 (37%), Gaps = 37/223 (16%) Query: 5 HKFQRELYCDLQGENIEAFNSA------SKTVKCLQL--ANGAVY---------YDEEKH 47 Q++LY DL +N+ A A +QL A Y D Sbjct: 633 RAMQKQLYKDLLTKNVAALQGAEGAGRTQLLNLAMQLRKACNHPYLFEGYESENADPFGE 692 Query: 48 WKEVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQ-----KAFPQGRTL-----D 95 + K++ + ++ + ++ + L+ + F R D Sbjct: 693 HVIENAGKLRFCDRLLRRLIQEHRRCLIFTQMTKMIDILEDYCRIRMFKYCRIDGNTSGD 752 Query: 96 KDPCTIQEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGV 153 + I+ +N IP+ + G G+NL + ++ + W+ + Q ++R+ Sbjct: 753 ERDRQIEAFNAPGSDIPIFLLSTRAGGLGINL-ATADTVILYDSDWNPQVDLQAMDRV-- 809 Query: 154 TRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + G K AV VY L+ ++TI++ +++R K + ++ Sbjct: 810 ---HRIGQKSAVNVYRLVHEHTIEQKIIERAMLKLQLDTAIIQ 849 >gi|322694613|gb|EFY86438.1| SNF2 family helicase/ATPase, putative [Metarhizium acridum CQMa 102] Length = 1027 Score = 91.9 bits (227), Expect = 4e-17, Method: Composition-based stats. Identities = 41/168 (24%), Positives = 70/168 (41%), Gaps = 19/168 (11%) Query: 50 EVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQK---------AFPQGRTLDKDP 98 E+ K+ L +I + N ++V ++ + LQ+ G T + Sbjct: 844 ELDSGKVTKLLELIRQYQENGDRVLVFSKYSRLIELLQEVLALQGVDHRVLMGNTNVSER 903 Query: 99 CT-IQEWNEG-KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 T I E+NE IP+ + G G+NL N ++ F L + ++ Q R Sbjct: 904 QTLIDEFNEDASIPVFLLTTGAGGTGINLT-AANKVIIFDLSDNPQDDIQA-----ENRA 957 Query: 157 RQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIH 204 + G KR V V LIA +I+EL+ + + K + + + A E H Sbjct: 958 HRLGQKRDVEVIRLIASQSIEELIYKACQKKIELANKVTGAGALEDTH 1005 >gi|320170019|gb|EFW46918.1| SNF2 superfamily RAD5 protein [Capsaspora owczarzaki ATCC 30864] Length = 1372 Score = 91.9 bits (227), Expect = 4e-17, Method: Composition-based stats. Identities = 31/170 (18%), Positives = 62/170 (36%), Gaps = 19/170 (11%) Query: 45 EKHWKEVHD--EKIKALEVIIEKANAAPIIVAYHFNSDLARLQ-----KAFPQGRTLD-- 95 + WK + AL+ + A +V + S + ++ + F R Sbjct: 1173 NRPWKASTKILALVAALKELWTVEQDAKAVVFSQWTSMMDLIEVEFRHQGFVYVRLDGSL 1232 Query: 96 ---KDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERI 151 + ++ + + + ++ S G GLNL N + WW++ Q + R+ Sbjct: 1233 SQPQRERVLEAFQRDPAVKIIIISLFSGGVGLNLTAAAN-VYLMDSWWNVAVENQALHRV 1291 Query: 152 GVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 + G + V V IA T++ +L+ K + + L K E Sbjct: 1292 -----HRIGQTKPVIVTRFIAARTVETRMLKIQARKQFLANHALATNKSE 1336 >gi|330913020|ref|XP_003296155.1| hypothetical protein PTT_05138 [Pyrenophora teres f. teres 0-1] gi|311331916|gb|EFQ95739.1| hypothetical protein PTT_05138 [Pyrenophora teres f. teres 0-1] Length = 1131 Score = 91.9 bits (227), Expect = 4e-17, Method: Composition-based stats. Identities = 41/231 (17%), Positives = 88/231 (38%), Gaps = 43/231 (18%) Query: 6 KFQRELYCDLQGENIEAFNSAS--------KTVKCLQLAN-------------GAVYYDE 44 Q + Y + ++I+A N + +QL G Y + Sbjct: 440 DMQVQWYKKILEKDIDAVNGGAGNKESKTRLLNIVMQLRKCCNHPYLFEGAEPGPPYTTD 499 Query: 45 EKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARL---------QKAFPQGRT 93 E + K+ L+ ++++ A + +++ + L + Q G T Sbjct: 500 EHLV--TNAAKMVMLDKLLKRMKAQGSRVLIFSQMSRVLDIMEDYSVMRGYQYCRIDGST 557 Query: 94 LDKDP-CTIQEWNE--GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 +D I ++N+ + L + G G+NL +I+V F W+ + Q ++R Sbjct: 558 AHEDRIQAIDDYNKEGSEKFLFLLTTRAGGLGINLT-SADIVVLFDSDWNPQADLQAMDR 616 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 + G + V+V+ + + I+E VL+R K + L++ + + Sbjct: 617 -----AHRIGQTKQVYVFRFVTEMAIEEKVLERAAQKLRLDQLVIQQGRTQ 662 >gi|301107063|ref|XP_002902614.1| chromodomain protein, putative [Phytophthora infestans T30-4] gi|262098488|gb|EEY56540.1| chromodomain protein, putative [Phytophthora infestans T30-4] Length = 1748 Score = 91.9 bits (227), Expect = 4e-17, Method: Composition-based stats. Identities = 24/174 (13%), Positives = 59/174 (33%), Gaps = 22/174 (12%) Query: 39 AVYYDEEKHWKEV--HDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQ--------- 85 V +DE+ K + K L+ ++ + +++ F L ++ Sbjct: 1031 CVGFDEQLRMKILIQASGKTVLLDKLLTKFRQENKKVLIFSQFKIMLDIIEDMCQLRGYS 1090 Query: 86 -KAFPQGRTLDKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLE 142 + + I +N + G G+NL ++++ F W+ + Sbjct: 1091 MERLDGSVRGNSRQAAIDRFNSPDSDTFAFLLSTRAGGVGINL-IAASVVILFDSDWNPQ 1149 Query: 143 EHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 Q + R + G ++V +Y L+ + T + + + K + + Sbjct: 1150 NDLQAVARC-----HRIGQTQSVNIYRLVTKKTYEAQMFEIASKKLGMHHAVFE 1198 >gi|296826190|ref|XP_002850934.1| chromatin remodelling complex ATPase chain ISW1 [Arthroderma otae CBS 113480] gi|238838488|gb|EEQ28150.1| chromatin remodelling complex ATPase chain ISW1 [Arthroderma otae CBS 113480] Length = 1113 Score = 91.9 bits (227), Expect = 4e-17, Method: Composition-based stats. Identities = 43/231 (18%), Positives = 89/231 (38%), Gaps = 43/231 (18%) Query: 6 KFQRELYCDLQGENIEAFNSA-----SKT------VKCLQLAN----------GAVYYDE 44 + Q + Y + ++I+A N A SKT ++ + N G Y + Sbjct: 428 EMQVKWYQKILEKDIDAVNGAQGNRESKTRLVNIVMQLRKCCNHPYLFEGAEPGPPYTTD 487 Query: 45 EKHWKEVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQ---------KAFPQGRT 93 E + K+ L+ ++ + + +++ + L L+ G T Sbjct: 488 EHLI--DNSGKMVILDKLLSRLFKQGSRVLIFSQMSRVLDILEDYCVFRGHEYCRIDGST 545 Query: 94 LDKDP-CTIQEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 +D I E+N + + + G G+NL +I++ F W+ + Q ++R Sbjct: 546 AHEDRIQAIDEYNRPGSEKFVFLLTTRAGGLGINLTT-ADIVILFDSDWNPQADLQAMDR 604 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 + G + V V+ I + I+E VL+R K + L++ + + Sbjct: 605 -----AHRIGQTKQVVVFRFITEKAIEEKVLERAAQKLRLDQLVIQQGRAQ 650 >gi|226290625|gb|EEH46109.1| SNF2 family ATP-dependent chromatin-remodeling factor snf21 [Paracoccidioides brasiliensis Pb18] Length = 1332 Score = 91.9 bits (227), Expect = 4e-17, Method: Composition-based stats. Identities = 40/225 (17%), Positives = 78/225 (34%), Gaps = 33/225 (14%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQL---ANGA----VYYDEEKHWKEVHD- 53 K Y + + + +QL N DE + +D Sbjct: 691 KLYKQLVTHNKLVVSDGKGGKTGMRGLSNMLMQLRKLCNHPFVFESVEDEMNPGRATNDL 750 Query: 54 -----EKIKALEVIIEK--ANAAPIIVAYHFNSD---------LARLQKAFPQGRTLDKD 97 K + L+ I+ K A+ +++ + L ++ G T D Sbjct: 751 IWRTAGKFELLDRILPKFKASGHRVLMFFQMTQIMNIMEDFLRLRGMKYLRLDGSTKSDD 810 Query: 98 PCTI-QEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 + +E+N + + G GLNLQ + ++ + W+ + Q Sbjct: 811 RSDLLKEFNAPGSEYFCFLLSTRAGGLGLNLQT-ADTVIIYDSDWNPHQDLQA-----QD 864 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 R + G K V + LI N+++E +L+R + K + ++ A K Sbjct: 865 RAHRIGQKNEVRILRLITSNSVEERILERAQFKLDMDGKVIQAGK 909 >gi|224003061|ref|XP_002291202.1| predicted protein [Thalassiosira pseudonana CCMP1335] gi|220972978|gb|EED91309.1| predicted protein [Thalassiosira pseudonana CCMP1335] Length = 1008 Score = 91.9 bits (227), Expect = 4e-17, Method: Composition-based stats. Identities = 26/141 (18%), Positives = 56/141 (39%), Gaps = 18/141 (12%) Query: 68 AAPIIVAYHFNSDLARLQKAF----------PQGRTLDKDPCTIQEWNEGKIP--LLFAH 115 +++ L L+ T + I E+N+ L Sbjct: 469 GHRVLLFTQMTRILDILEDYMHMRGFQYCRIDGNTTYEDREERIDEYNKPDSEKFLFLLS 528 Query: 116 PASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNT 175 + G G+NLQ ++++ F W+ + Q R + G KR V V+ ++ ++T Sbjct: 529 TRAGGLGINLQT-ADVVILFDSDWNPQADLQA-----QDRAHRIGQKRTVQVFRIVTEDT 582 Query: 176 IDELVLQRLRTKSTIQDLLLN 196 I++ V++R + K + +++ Sbjct: 583 IEQKVVERAQQKLKLDAMVVQ 603 >gi|156399887|ref|XP_001638732.1| predicted protein [Nematostella vectensis] gi|156225855|gb|EDO46669.1| predicted protein [Nematostella vectensis] Length = 911 Score = 91.9 bits (227), Expect = 4e-17, Method: Composition-based stats. Identities = 24/156 (15%), Positives = 60/156 (38%), Gaps = 19/156 (12%) Query: 53 DEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQK----------AFPQGRTLDKDPCT 100 K+ L+ ++ I++ L LQ ++ Sbjct: 681 SGKMLLLDQMVPALKRRGHKILIFSQMTKMLDILQDYCYLRGYQYSRLDGSMKVEDRREE 740 Query: 101 IQEW-NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQA 159 I + ++ + + + G GLNL + ++ + W+ + Q +R + Sbjct: 741 IDAFASDPEKFIFLLSTRAGGLGLNL-SAADTVIIYDSDWNPQSDLQAQDRC-----HRI 794 Query: 160 GFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 G + + VY L+ NT+D+ +++R +K ++ +++ Sbjct: 795 GQTKPILVYRLVTSNTVDQKIVERAASKRKLEKMVI 830 >gi|294874590|ref|XP_002767014.1| DNA repair helicase, putative [Perkinsus marinus ATCC 50983] gi|239868417|gb|EEQ99731.1| DNA repair helicase, putative [Perkinsus marinus ATCC 50983] Length = 417 Score = 91.9 bits (227), Expect = 4e-17, Method: Composition-based stats. Identities = 34/149 (22%), Positives = 55/149 (36%), Gaps = 21/149 (14%) Query: 52 HDEKIKAL----EVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRT----------LDKD 97 KI+AL E + + A +V F S L Q + L Sbjct: 275 SSSKIEALVAEVEAMRKADGEAKGLVFSSFVSLLELCQYRLHKAGITTLILHGELPLPLR 334 Query: 98 PCTIQEWNEGK-IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 ++ ++ PLL S G GLNLQ N + WW+ QQ +R Sbjct: 335 AKVMKTFSSADTCPLLLISLMSGGEGLNLQV-ANHVFLLDPWWNPAVEQQATQR-----A 388 Query: 157 RQAGFKRAVFVYYLIAQNTIDELVLQRLR 185 + G + V V ++ +TI++ ++ R Sbjct: 389 HRLGQSKRVQVLKMLTHDTIEDRIVALQR 417 >gi|158301559|ref|XP_321235.4| AGAP001820-PA [Anopheles gambiae str. PEST] gi|157012531|gb|EAA01172.5| AGAP001820-PA [Anopheles gambiae str. PEST] Length = 1987 Score = 91.9 bits (227), Expect = 4e-17, Method: Composition-based stats. Identities = 34/187 (18%), Positives = 69/187 (36%), Gaps = 30/187 (16%) Query: 34 QLANGAVYYDEEKHWKEVHDEKIKALEVII----------EKANAAPIIVAYHFNSDLAR 83 Q+ G + H K+ L+ ++ N ++ + L Sbjct: 1722 QMIVGEFTRNGSSMDDIEHSAKLPVLKQLLLDCGIGTNEDVSVNQHRALIFCQLKAMLDI 1781 Query: 84 -----LQKAFPQGRTLDKDPCT--------IQEWN-EGKIPLLFAHPASCGHGLNLQYGG 129 L+K P L D + ++N + I +L G GLNL G Sbjct: 1782 VENDLLKKHLPAVSYLRLDGSVPPSTRHHIVTKFNGDPSIDVLLLTTQVGGLGLNLT-GA 1840 Query: 130 NILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKST 189 + ++F W+ + Q ++R + G K+ V VY LI + +++E ++ + K Sbjct: 1841 DTVIFVEHDWNPMKDLQAMDR-----AHRIGQKKVVNVYRLITRKSLEEKIMGLQKFKLL 1895 Query: 190 IQDLLLN 196 + +++ Sbjct: 1896 TANTVVS 1902 >gi|302408887|ref|XP_003002278.1| DNA repair protein RAD5 [Verticillium albo-atrum VaMs.102] gi|261359199|gb|EEY21627.1| DNA repair protein RAD5 [Verticillium albo-atrum VaMs.102] Length = 1130 Score = 91.9 bits (227), Expect = 4e-17, Method: Composition-based stats. Identities = 30/152 (19%), Positives = 52/152 (34%), Gaps = 17/152 (11%) Query: 54 EKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTL----------DKDPCTIQE 103 I AL + + +V F S L ++ A + + E Sbjct: 617 ALISALRELRREHPRMKSVVFSQFTSFLTLIEPALAKSNIKFLRLDGTMAQKARAAVLNE 676 Query: 104 WNEGKI-PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFK 162 + E +L + G GLNL + WW Q I+R+ + G + Sbjct: 677 FQEANQFTILLLSLRAGGVGLNLTT-AKRVYMMDPWWSFAIEAQAIDRV-----HRMGQE 730 Query: 163 RAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 V VY I + +++E +L+ K + L Sbjct: 731 DEVKVYRFIVEQSVEERMLKVQERKKFLATSL 762 >gi|117558161|gb|AAI27105.1| Excision repair cross-complementing rodent repair deficiency, complementation group 6 [Homo sapiens] Length = 1493 Score = 91.9 bits (227), Expect = 4e-17, Method: Composition-based stats. Identities = 36/172 (20%), Positives = 63/172 (36%), Gaps = 21/172 (12%) Query: 43 DEEKHWKEVHDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQK----------AFPQ 90 D+ +WK K+ +E +++ +++ L L+ Sbjct: 830 DQFGYWKR--SGKMIVVESLLKIWHKQGQRVLLFSQSRQMLDILEVFLRAQKYTYLKMDG 887 Query: 91 GRTLDKDPCTIQEWNEG-KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIE 149 T+ I +NE I + G G+NL G N +V + W+ Q E Sbjct: 888 TTTIASRQPLITRYNEDTSIFVFLLTTRVGGLGVNLT-GANRVVIYDPDWNPSTDTQARE 946 Query: 150 RIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 R + G K+ V VY L+ TI+E + R K + + +L K+ Sbjct: 947 RAW-----RIGQKKQVTVYRLLTAGTIEEKIYHRQIFKQFLTNRVLKDPKQR 993 >gi|73951135|ref|XP_859122.1| PREDICTED: similar to Chromodomain-helicase-DNA-binding protein 2 (CHD-2) isoform 6 [Canis familiaris] Length = 1836 Score = 91.9 bits (227), Expect = 4e-17, Method: Composition-based stats. Identities = 25/161 (15%), Positives = 59/161 (36%), Gaps = 20/161 (12%) Query: 52 HDEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQKAF---------PQGRTLDK-DPC 99 K+ L+ ++ + +++ L L + G + Sbjct: 798 SSGKLILLDKLLTRLRERGNRVLIFSQMVRMLDILAEYLTIKHYPFQRLDGSIKGEIRKQ 857 Query: 100 TIQEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 + +N + + G G+NL + +V F W+ + Q R Sbjct: 858 ALDHFNADGSEDFCFLLSTRAGGLGINL-ASADTVVIFDSDWNPQNDLQAQAR-----AH 911 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNAL 198 + G K+ V +Y L+ + T++E +++R + K + L++ + Sbjct: 912 RIGQKKQVNIYRLVTKGTVEEEIIERAKKKMVLDHLVIQRM 952 >gi|119592219|gb|EAW71813.1| FLJ20105 protein, isoform CRA_a [Homo sapiens] Length = 1127 Score = 91.9 bits (227), Expect = 4e-17, Method: Composition-based stats. Identities = 27/152 (17%), Positives = 52/152 (34%), Gaps = 20/152 (13%) Query: 53 DEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQK-----AFPQGRT-------LDKDP 98 K+ L ++++ +V L +++ F R L+++ Sbjct: 336 SGKMIFLMDLLKRLRDEGHQTLVFSQSRQILNIIERLLKNRHFKTLRIDGTVTHLLEREK 395 Query: 99 CTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQ 158 + G GL L +V F W+ Q ++R+ + Sbjct: 396 RINLFQQNKDYSVFLLTTQVGGVGLTLT-AATRVVIFDPSWNPATDAQAVDRV-----YR 449 Query: 159 AGFKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 G K V VY LI T++E + +R K ++ Sbjct: 450 IGQKENVVVYRLITCGTVEEKIYRRQVFKDSL 481 >gi|66357154|ref|XP_625755.1| chromodomain-helicase-DNA-binding'multidomain chromatin protein with the following architecture: chromo-bromo-chromo-SNF2 ATpase' [Cryptosporidium parvum Iowa II] gi|46226948|gb|EAK87914.1| chromodomain-helicase-DNA-binding'multidomain chromatin protein with the following architecture: chromo-bromo-chromo-SNF2 ATpase' [Cryptosporidium parvum Iowa II] Length = 2270 Score = 91.9 bits (227), Expect = 4e-17, Method: Composition-based stats. Identities = 27/143 (18%), Positives = 47/143 (32%), Gaps = 18/143 (12%) Query: 65 KANAAPIIVAYHFNSDLARLQKAFP---------QGRTLDKDP-CTIQEWNEGKIP--LL 112 KA +++ F L L++ G D I +N + Sbjct: 1710 KAEGHRVLIFSQFIQTLTLLEELVEHHGWGYERLDGSIRGTDRNAAITRFNAEDSDKFVF 1769 Query: 113 FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIA 172 + G G+NL + ++ F W+ + Q R + G R V VY LI Sbjct: 1770 LLSTRAGGLGINLT-SADTVIIFDSDWNPQNDVQACAR-----AHRIGQTRDVKVYRLIT 1823 Query: 173 QNTIDELVLQRLRTKSTIQDLLL 195 T + + +R K + + Sbjct: 1824 ARTYEAEMFERAGRKLGLNTAVF 1846 >gi|294892047|ref|XP_002773868.1| chromodomain helicase dna binding protein, putative [Perkinsus marinus ATCC 50983] gi|239879072|gb|EER05684.1| chromodomain helicase dna binding protein, putative [Perkinsus marinus ATCC 50983] Length = 459 Score = 91.9 bits (227), Expect = 4e-17, Method: Composition-based stats. Identities = 37/212 (17%), Positives = 80/212 (37%), Gaps = 37/212 (17%) Query: 11 LYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAP 70 L D++ +I++ S++ T K L++ + + + K L ++E Sbjct: 131 LLDDVEEAHIQSNQSSNMTPKELEMKS---LVEMSGKMVFLD----KLLPRLMETQ--QK 181 Query: 71 IIVAYHFNSDLARLQKAFP----QGRTLD------KDPCTIQEWN-----------EGKI 109 ++V L ++ + LD + I +N ++ Sbjct: 182 VLVFSQMTRALDVIEDYLLWKGYKYERLDGNVSGTQRQEAIDRFNDTSSQSSHGASNKEM 241 Query: 110 P-LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVY 168 P + + G G+NL N++V + W+ + Q R + G K+ V VY Sbjct: 242 PWIFLLSTRAGGVGINLT-AANVVVIYDSDWNPQNDMQAQARC-----HRIGQKKEVKVY 295 Query: 169 YLIAQNTIDELVLQRLRTKSTIQDLLLNALKK 200 LI +++ +E + K ++ L++ + K Sbjct: 296 RLITRDSYEERMFDVASKKLGLEQALMSGVTK 327 >gi|242793561|ref|XP_002482189.1| SNF2 family helicase, putative [Talaromyces stipitatus ATCC 10500] gi|218718777|gb|EED18197.1| SNF2 family helicase, putative [Talaromyces stipitatus ATCC 10500] Length = 938 Score = 91.9 bits (227), Expect = 4e-17, Method: Composition-based stats. Identities = 44/207 (21%), Positives = 75/207 (36%), Gaps = 25/207 (12%) Query: 5 HKFQRELYCDLQGENIEAFNSASK-TVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVII 63 +R+ C L ++ + + + A DE + KIKAL I+ Sbjct: 710 QVIERQHKCPLCRAELKDTGALVSPATELGEDAG----VDEAETDASAPSSKIKALIQIL 765 Query: 64 EK---ANAAPIIVAYHFNSDLARLQKAF---------PQGRTL-DKDPCTIQEW-NEGKI 109 +V + S L ++ G+ +K I E+ N+ K Sbjct: 766 TAKGQVEQTKTVVFSQWTSFLDIIEPHLTANDICFTRIDGKLSSNKRDQAISEFTNDPKC 825 Query: 110 PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYY 169 +L A C GLNL N +V WW Q I+R+ + G KR V+ Sbjct: 826 TVLLASLNVCSVGLNL-VAANQVVLCDSWWAPAIEDQAIDRV-----YRLGQKRETTVWR 879 Query: 170 LIAQNTIDELVLQRLRTKSTIQDLLLN 196 L+ + ++++ VL K + L+ Sbjct: 880 LVMEGSVEDRVLDIQAAKRELSSTALS 906 >gi|241250526|ref|XP_002403274.1| chromodomain helicase DNA binding protein, putative [Ixodes scapularis] gi|215496466|gb|EEC06106.1| chromodomain helicase DNA binding protein, putative [Ixodes scapularis] Length = 1514 Score = 91.9 bits (227), Expect = 4e-17, Method: Composition-based stats. Identities = 32/197 (16%), Positives = 67/197 (34%), Gaps = 36/197 (18%) Query: 29 TVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKAN---------------AAPIIV 73 ++ + N AV + + + AL+ II + ++V Sbjct: 745 MMELKKCCNHAVLIRPPEQPAVNN---VDALQQIIRGSGKLLLLDKLLCRLKETGHRVLV 801 Query: 74 AYHFNSDLARL-----QKAFPQGRTLDK-----DPCTIQEWNEGKIP--LLFAHPASCGH 121 L + + FP R + +N + G Sbjct: 802 FSQMVRMLDIIADYLQLRRFPFQRLDGSIKGELRRQALDHFNADTSQDFCFLLSTRAGGL 861 Query: 122 GLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVL 181 G+NL + +V F W+ + Q R + G K V +Y L+ +N+++E ++ Sbjct: 862 GINL-ATADTVVIFDSDWNPQNDLQAQAR-----AHRIGQKNQVNIYRLVTKNSVEEDII 915 Query: 182 QRLRTKSTIQDLLLNAL 198 +R + K + L++ + Sbjct: 916 ERAKRKMVLDHLVIQRM 932 >gi|157822125|ref|NP_001100766.1| DNA excision repair protein ERCC-6 [Rattus norvegicus] gi|149034143|gb|EDL88913.1| excision repair cross-complementing rodent repair deficiency, complementation group 6 (predicted) [Rattus norvegicus] Length = 1325 Score = 91.9 bits (227), Expect = 4e-17, Method: Composition-based stats. Identities = 30/146 (20%), Positives = 52/146 (35%), Gaps = 17/146 (11%) Query: 67 NAAPIIVAYHFNSDLARLQK----------AFPQGRTLDKDPCTIQEWNEG-KIPLLFAH 115 +++ L L+ T+ I ++NE I + Sbjct: 758 QGQRVLLFSQSRQMLHILEVFLRAHKYSYLKMDGTTTIASRQPLITKYNEDTSIFVFLLT 817 Query: 116 PASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNT 175 G G+NL G N ++ + W+ Q ER + G K+ V VY L+ T Sbjct: 818 TRVGGLGVNLT-GANRVIIYDPDWNPSTDTQARERAW-----RIGQKKQVTVYRLLTAGT 871 Query: 176 IDELVLQRLRTKSTIQDLLLNALKKE 201 I+E + R K + + +L K+ Sbjct: 872 IEEKIYHRQIFKQFLTNRVLKDPKQR 897 >gi|147676741|ref|YP_001210956.1| hypothetical protein PTH_0406 [Pelotomaculum thermopropionicum SI] gi|146272838|dbj|BAF58587.1| hypothetical protein [Pelotomaculum thermopropionicum SI] Length = 140 Score = 91.9 bits (227), Expect = 4e-17, Method: Composition-based stats. Identities = 23/91 (25%), Positives = 40/91 (43%), Gaps = 6/91 (6%) Query: 107 GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVF 166 G P + + G GLNL + ++ + LWW+ Q +R + G R V Sbjct: 35 GAAPFMVVSLKAGGTGLNLTAATH-VIHYDLWWNPAVEDQATDR-----TYRIGQTRTVM 88 Query: 167 VYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 V+ LI+ T +E + + +K + L + A Sbjct: 89 VHRLISLGTFEEKINTMMASKRELAGLTVAA 119 >gi|71274979|ref|ZP_00651267.1| hypothetical protein XfasaDRAFT_2287 [Xylella fastidiosa Dixon] gi|71898395|ref|ZP_00680568.1| hypothetical protein XfasoDRAFT_3433 [Xylella fastidiosa Ann-1] gi|71164711|gb|EAO14425.1| hypothetical protein XfasaDRAFT_2287 [Xylella fastidiosa Dixon] gi|71731918|gb|EAO33976.1| hypothetical protein XfasoDRAFT_3433 [Xylella fastidiosa Ann-1] Length = 104 Score = 91.9 bits (227), Expect = 4e-17, Method: Composition-based stats. Identities = 34/62 (54%), Positives = 48/62 (77%) Query: 140 DLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 DLE +QQ++ERIG TRQ QAG KR VF+++++A T+DELV+ R +K +QDLLL A+K Sbjct: 29 DLEHYQQIVERIGPTRQAQAGHKRPVFIHHIVAAGTVDELVMARRESKREVQDLLLEAVK 88 Query: 200 KE 201 + Sbjct: 89 RR 90 >gi|22760345|dbj|BAC11160.1| unnamed protein product [Homo sapiens] Length = 1106 Score = 91.9 bits (227), Expect = 5e-17, Method: Composition-based stats. Identities = 27/152 (17%), Positives = 52/152 (34%), Gaps = 20/152 (13%) Query: 53 DEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQK-----AFPQGRT-------LDKDP 98 K+ L ++++ +V L +++ F R L+++ Sbjct: 315 SGKMIFLMDLLKRLRDEGHQTLVFSQSRQILNIIERLLKNRHFKTLRIDGTVTHLLEREK 374 Query: 99 CTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQ 158 + G GL L +V F W+ Q ++R+ + Sbjct: 375 RINLFQQNKDYSVFLLTTQVGGVGLTLT-AATRVVIFDPSWNPATDAQAVDRV-----YR 428 Query: 159 AGFKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 G K V VY LI T++E + +R K ++ Sbjct: 429 IGQKENVVVYRLITCGTVEEKIYRRQVFKDSL 460 >gi|254568488|ref|XP_002491354.1| RING finger protein involved in proteolytic control of sumoylated substrates [Pichia pastoris GS115] gi|238031151|emb|CAY69074.1| RING finger protein involved in proteolytic control of sumoylated substrates [Pichia pastoris GS115] gi|328352132|emb|CCA38531.1| Putative DNA helicase ino80 [Pichia pastoris CBS 7435] Length = 1140 Score = 91.9 bits (227), Expect = 5e-17, Method: Composition-based stats. Identities = 25/155 (16%), Positives = 61/155 (39%), Gaps = 17/155 (10%) Query: 53 DEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTL-----------DKDPCTI 101 D+ ++ ++ ++ IIV F + ++ + ++D Sbjct: 969 DKAVEMIQELLRDNPGEKIIVFSQFTTLFDVIEVILKENNIKFIRYDGSMSLSNRDAAIQ 1028 Query: 102 QEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGF 161 + + + ++ + GL L +++ +W+ Q ++R + G Sbjct: 1029 EFYESTEKNVMLLSLKAGNVGLTLTCASRVIIM-DPFWNPYVEDQAMDR-----AHRIGQ 1082 Query: 162 KRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 R VFVY ++ +NT+++ +L TK I + L+ Sbjct: 1083 LREVFVYRMLIKNTVEDRILTIQNTKREIVENALD 1117 >gi|71020293|ref|XP_760377.1| hypothetical protein UM04230.1 [Ustilago maydis 521] gi|46100046|gb|EAK85279.1| hypothetical protein UM04230.1 [Ustilago maydis 521] Length = 2115 Score = 91.9 bits (227), Expect = 5e-17, Method: Composition-based stats. Identities = 27/142 (19%), Positives = 57/142 (40%), Gaps = 20/142 (14%) Query: 69 APIIVAYHFNSDLARLQK-------------AFPQGRTLDKDPCTIQEWN-EGKIPLLFA 114 +++ + +Q+ + +K +Q +N + I +L Sbjct: 1906 HRVLIFCQLKQMIDIIQRDLFAALMPSVSYMRLDGSVSAEKRHSIVQTFNADPSIDVLLL 1965 Query: 115 HPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQN 174 G GL L G + ++F W+ + Q ++R + G K+ V VY LI +N Sbjct: 1966 TTQVGGLGLTLT-GADTVIFVEHDWNPMKDLQAMDR-----AHRLGQKKVVNVYRLITRN 2019 Query: 175 TIDELVLQRLRTKSTIQDLLLN 196 T++ ++ R K + + ++N Sbjct: 2020 TLEAKIMGLQRFKLNVANSVVN 2041 >gi|322489686|emb|CBZ24946.1| putative DNA excision repair protein [Leishmania mexicana MHOM/GT/2001/U1103] Length = 1280 Score = 91.9 bits (227), Expect = 5e-17, Method: Composition-based stats. Identities = 33/165 (20%), Positives = 60/165 (36%), Gaps = 19/165 (11%) Query: 44 EEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQK----------AFPQG 91 + K+ AL +++++ + ++V L ++ Sbjct: 875 SNNPVDLLGSGKLNALLMMLKEWKSFGHRVLVFSQTRMMLDIIENMCEQQAYSYIRMDGA 934 Query: 92 RTLDKDPCTIQEWNEGK-IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 + +NE I + G G+NL G + +V F W+ Q ER Sbjct: 935 TNGHYRQELMDRFNEDDSIFVALLTTRVGGIGVNL-IGADRVVIFDPDWNPITDVQARER 993 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 + G KR V VY LI +++E +L+R K + D +L Sbjct: 994 AW-----RIGQKREVCVYRLITSGSVEESILRRQLAKMYVTDKVL 1033 >gi|300120100|emb|CBK19654.2| unnamed protein product [Blastocystis hominis] Length = 1570 Score = 91.9 bits (227), Expect = 5e-17, Method: Composition-based stats. Identities = 24/144 (16%), Positives = 50/144 (34%), Gaps = 18/144 (12%) Query: 65 KANAAPIIVAYHFNSDLARLQ----------KAFPQGRTLDKDPCTIQEWNEG--KIPLL 112 ++ +++ L +Q + G + I+ ++ + Sbjct: 401 QSQGHRVLLFSQMTHMLDIIQDYLTLKGYLFERIDGGVKSNDRQAAIERFSAPGSDRFIF 460 Query: 113 FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIA 172 + G G+NL + ++ + W+ + Q R + G +AV VY LI Sbjct: 461 LICTRAGGVGINLT-AADTVIIYDSDWNPQNDIQAQARC-----HRIGQDKAVKVYRLIT 514 Query: 173 QNTIDELVLQRLRTKSTIQDLLLN 196 T + + QR K + +LN Sbjct: 515 NRTYEMEMFQRANLKLGLDKAVLN 538 >gi|297686445|ref|XP_002820759.1| PREDICTED: LOW QUALITY PROTEIN: DNA excision repair protein ERCC-6-like [Pongo abelii] Length = 1493 Score = 91.9 bits (227), Expect = 5e-17, Method: Composition-based stats. Identities = 36/172 (20%), Positives = 63/172 (36%), Gaps = 21/172 (12%) Query: 43 DEEKHWKEVHDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQK----------AFPQ 90 D+ +WK K+ +E +++ +++ L L+ Sbjct: 830 DQFGYWKR--SGKMIVVESLLKIWHKQGQRVLLFSQSRQMLDILEVFLRAQKYTYLKMDG 887 Query: 91 GRTLDKDPCTIQEWNEG-KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIE 149 T+ I +NE I + G G+NL G N +V + W+ Q E Sbjct: 888 TTTIASRQPLITRYNEDTSIFVFLLTTRVGGLGVNLT-GANRVVIYDPDWNPSTDTQARE 946 Query: 150 RIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 R + G K+ V VY L+ TI+E + R K + + +L K+ Sbjct: 947 RAW-----RIGQKKQVTVYRLLTAGTIEEKIYHRQIFKQFLTNRVLKDPKQR 993 >gi|237756840|ref|ZP_04585323.1| helicase SWR1 [Sulfurihydrogenibium yellowstonense SS-5] gi|237691004|gb|EEP60129.1| helicase SWR1 [Sulfurihydrogenibium yellowstonense SS-5] Length = 383 Score = 91.9 bits (227), Expect = 5e-17, Method: Composition-based stats. Identities = 34/190 (17%), Positives = 79/190 (41%), Gaps = 30/190 (15%) Query: 29 TVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKA--NAAPIIVAYHFNSD-LARLQ 85 K Q+ N + +H K + L+ I+++ +++ +F ++ + ++ Sbjct: 189 LQKLRQICNFP--------PESIHSPKAERLKEIVKELADQKEKVVIFTNFVNEGVDKII 240 Query: 86 KAFPQ-------------GRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNIL 132 K + +K+ + + K + + G GL L + + Sbjct: 241 KNLKTILQPQQIVSYHGSLKPEEKNLAVKKFVEDEKCLVFVGTINAAGEGLTLT-SSSYV 299 Query: 133 VFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQD 192 +FF L W+ + Q +R+ + G K V +Y I QNT++E +LQ+L K ++ + Sbjct: 300 IFFDLHWNPAKMWQAEDRV-----HRIGQKNKVNIYTFITQNTVEEKILQKLEEKRSMIN 354 Query: 193 LLLNALKKET 202 +++ + + Sbjct: 355 NVIDDVSSDI 364 >gi|255552319|ref|XP_002517204.1| ATP binding protein, putative [Ricinus communis] gi|223543839|gb|EEF45367.1| ATP binding protein, putative [Ricinus communis] Length = 1079 Score = 91.9 bits (227), Expect = 5e-17, Method: Composition-based stats. Identities = 31/157 (19%), Positives = 68/157 (43%), Gaps = 20/157 (12%) Query: 55 KIKALEVIIE--KANAAPIIVAYHFNSDLARL---------QKAFPQGRTL-DKDPCTIQ 102 K + L+ ++ +A +++ + L + G T ++ ++ Sbjct: 634 KFELLDRLLPKLRATGHRVLLFSQMTRLMDILEIYLQLHDFKYLRLDGSTKTEERGTLLK 693 Query: 103 EWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 ++N P + + G GLNLQ + ++ F W+ + QQ +R + G Sbjct: 694 QFNAPDSPYFMFLLSTRAGGLGLNLQT-ADTVIIFDSDWNPQMDQQAEDR-----AHRIG 747 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 K+ V V+ L++ +I+E++L+R + K I ++ A Sbjct: 748 QKKEVRVFVLVSVGSIEEVILERAKQKMGIDAKVIQA 784 >gi|312074579|ref|XP_003140033.1| hypothetical protein LOAG_04448 [Loa loa] gi|307764800|gb|EFO24034.1| hypothetical protein LOAG_04448 [Loa loa] Length = 1841 Score = 91.9 bits (227), Expect = 5e-17, Method: Composition-based stats. Identities = 35/221 (15%), Positives = 82/221 (37%), Gaps = 37/221 (16%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE- 60 K Y + + + + G N + KC N + +E D +++ L Sbjct: 755 KNYKELSKGVKGSINGF----VNLVMELKKC---CNHSSLVRSYDQPEEGADARLQQLLK 807 Query: 61 -----VIIEKA------NAAPIIVAYHFNSDLARLQ-----KAFPQGRTLDKDPCTIQE- 103 ++++K +++ L +Q + FP R +++ Sbjct: 808 SSGKLILLDKLLCRLQETGHRVLIFSQMVMMLDIMQEYLQLRRFPSQRLDGSMRSDLRKA 867 Query: 104 ----WNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 +N P + G G+NL + ++ F W+ + Q + R Sbjct: 868 ALDHFNAPNSPDFCFLLSTRAGGLGINL-ATADTVIIFDSDWNPQNDLQAMSR-----AH 921 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNAL 198 + G K+ V +Y L+ + +++E +++R + K + L++ + Sbjct: 922 RIGQKKQVNIYRLVTKASVEEEIVERAKRKLVLDHLIIQRM 962 >gi|259149765|emb|CAY86569.1| Snf2p [Saccharomyces cerevisiae EC1118] Length = 1706 Score = 91.9 bits (227), Expect = 5e-17, Method: Composition-based stats. Identities = 32/159 (20%), Positives = 62/159 (38%), Gaps = 20/159 (12%) Query: 55 KIKALEVIIEK--ANAAPIIVAYHFNSDLAR---------LQKAFPQGRTL-DKDPCTIQ 102 K + L+ I+ K A +++ + + ++ G T D+ ++ Sbjct: 1091 KFELLDRILPKLKATGHRVLIFFQMTQIMDIMEDFLRYINIKYLRLDGHTKSDERSELLR 1150 Query: 103 EWNEGKIPL--LFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 +N + G GLNLQ + ++ F W+ + Q R + G Sbjct: 1151 LFNAPDSEYLCFILSTRAGGLGLNLQT-ADTVIIFDTDWNPHQDLQA-----QDRAHRIG 1204 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 K V + LI N+++E++L+R K I ++ A K Sbjct: 1205 QKNEVRILRLITTNSVEEVILERAHKKLDIDGKVIQAGK 1243 >gi|146413953|ref|XP_001482947.1| hypothetical protein PGUG_04902 [Meyerozyma guilliermondii ATCC 6260] Length = 1034 Score = 91.9 bits (227), Expect = 5e-17, Method: Composition-based stats. Identities = 41/230 (17%), Positives = 85/230 (36%), Gaps = 39/230 (16%) Query: 6 KFQRELYCDLQGENIEAFNSAS--------KTVKCLQL---ANGAVYYD--------EEK 46 + Q Y L ++I+A N +QL N +D Sbjct: 363 EMQIRWYKKLLEKDIDAVNGVVGKREGKTRLLNIVMQLRKCCNHPYLFDGAEPGPPYTTD 422 Query: 47 HWKEVHDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQ---------KAFPQGRTLD 95 + K+ L+ +++ + + +++ + L L+ G T Sbjct: 423 EHLAYNSGKMIILDKMLKKFREQGSRVLIFSQMSRLLDILEDYCYLRDYEYCRIDGSTAH 482 Query: 96 KDP-CTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIG 152 +D I +N + + + G G+NL +I++ + W+ + Q ++R Sbjct: 483 EDRIEAIDLYNAPDLDKFIFLLTTRAGGLGINLT-SADIVILYDSDWNPQADLQAMDR-- 539 Query: 153 VTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKET 202 + G K+ V VY + +N I+E VL+R K + L++ ++ T Sbjct: 540 ---AHRIGQKKQVHVYRFVTENAIEEKVLERAAQKLRLDQLVIQQGRQVT 586 >gi|123474505|ref|XP_001320435.1| SNF2 family N-terminal domain containing protein [Trichomonas vaginalis G3] gi|121903240|gb|EAY08212.1| SNF2 family N-terminal domain containing protein [Trichomonas vaginalis G3] Length = 1497 Score = 91.9 bits (227), Expect = 5e-17, Method: Composition-based stats. Identities = 25/144 (17%), Positives = 52/144 (36%), Gaps = 17/144 (11%) Query: 65 KANAAPIIVAYHFNSDLARL---------QKAFPQGRTLDKDPCT-IQEWN-EGKIPLLF 113 K +++ L + + G D D I +N + + + Sbjct: 630 KEQGHKVLIFSQMVRVLGIISIFLEANQYKYERLDGSVNDNDRQAAIDRFNQDPEAFVFL 689 Query: 114 AHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQ 173 + G G+NL N ++ + W+ + Q R + G + V VY L+ + Sbjct: 690 LSTKAGGVGINLT-AANTVIIYDSDWNPQNDIQAEARC-----HRIGQTQKVKVYRLVTR 743 Query: 174 NTIDELVLQRLRTKSTIQDLLLNA 197 T +E + +R K + ++L+ Sbjct: 744 ATYEEKMYERASKKLGLDHVVLDG 767 >gi|46136625|ref|XP_390004.1| hypothetical protein FG09828.1 [Gibberella zeae PH-1] Length = 882 Score = 91.9 bits (227), Expect = 5e-17, Method: Composition-based stats. Identities = 31/164 (18%), Positives = 61/164 (37%), Gaps = 24/164 (14%) Query: 43 DEEKHWKEVHDEKIKALEVIIEKA---NAAPIIVAYHFNSDLARLQKAFP---------- 89 DEE E K +A+ I++ + ++V + S L ++ Sbjct: 699 DEEDFDAESQSSKTEAMMQILKATMRKEGSKVVVFSQWTSFLNIIEAQLKADGMGYTRID 758 Query: 90 ---QGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 + DK + + + ++ A A C GLNL + ++ WW Q Sbjct: 759 GSMKADKRDKAIEALDS--DPETRVMLASLAVCSVGLNL-VAADTVILSDSWWAPAIEDQ 815 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 I+R+ + G R ++ L+ + +++E VL K + Sbjct: 816 AIDRV-----HRLGQTRETTIFRLVMEGSVEERVLDVQSEKREL 854 >gi|73951143|ref|XP_859285.1| PREDICTED: similar to Chromodomain-helicase-DNA-binding protein 2 (CHD-2) isoform 10 [Canis familiaris] Length = 1806 Score = 91.9 bits (227), Expect = 5e-17, Method: Composition-based stats. Identities = 25/161 (15%), Positives = 59/161 (36%), Gaps = 20/161 (12%) Query: 52 HDEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQKAF---------PQGRTLDK-DPC 99 K+ L+ ++ + +++ L L + G + Sbjct: 774 SSGKLILLDKLLTRLRERGNRVLIFSQMVRMLDILAEYLTIKHYPFQRLDGSIKGEIRKQ 833 Query: 100 TIQEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 + +N + + G G+NL + +V F W+ + Q R Sbjct: 834 ALDHFNADGSEDFCFLLSTRAGGLGINL-ASADTVVIFDSDWNPQNDLQAQAR-----AH 887 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNAL 198 + G K+ V +Y L+ + T++E +++R + K + L++ + Sbjct: 888 RIGQKKQVNIYRLVTKGTVEEEIIERAKKKMVLDHLVIQRM 928 >gi|309357491|emb|CAP35854.2| hypothetical protein CBG_18388 [Caenorhabditis briggsae AF16] Length = 995 Score = 91.9 bits (227), Expect = 5e-17, Method: Composition-based stats. Identities = 26/156 (16%), Positives = 61/156 (39%), Gaps = 19/156 (12%) Query: 57 KALEVIIEKANAAPIIVAYHFNSDLARLQ----------KAFPQGRTLDKDPCTIQEWN- 105 K L I + +++ F S L L+ K + I E+N Sbjct: 777 KMLPEI--QNKGDKVLIFSQFTSMLDILEVYLNIRGYSYKRLDGQTPVLDRQEMINEFNL 834 Query: 106 EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 + + + G G+NL +I++ + ++ +Q +R + G ++ V Sbjct: 835 SKDLFVFLLSTKAGGLGINLTSANHIIIH-DIDFNPYNDKQAEDRC-----HRMGQEKPV 888 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 V L+++ T++ +L + K ++ + + +K + Sbjct: 889 HVTRLVSKCTVEIGMLALAKKKLQLEKQVTDGVKGQ 924 >gi|302419287|ref|XP_003007474.1| ATP-dependent helicase RIS1 [Verticillium albo-atrum VaMs.102] gi|261353125|gb|EEY15553.1| ATP-dependent helicase RIS1 [Verticillium albo-atrum VaMs.102] Length = 1131 Score = 91.9 bits (227), Expect = 5e-17, Method: Composition-based stats. Identities = 26/181 (14%), Positives = 67/181 (37%), Gaps = 28/181 (15%) Query: 45 EKHWKEVHDEKIKALEVII-----EKANAAPIIVAYHFNSDLARLQKAFPQGRTL----- 94 KHW + K++A +I E A ++ + + ++ A + L Sbjct: 948 SKHW--MTSAKVQACVDLIKQIRDESDGRAKTLIFSQWTMFIDLMEIALQKDEELKHVGH 1005 Query: 95 ---DKDPCTIQEW-------NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEH 144 D D + + L+ + GLNL +++ +W+ Sbjct: 1006 VRYDGDMNMKDRFKSAQRFRENPRTKLMLISLKAGNAGLNLVQASRVIIL-DPFWNPFVE 1064 Query: 145 QQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIH 204 Q ++R+ + G + V VY ++ ++++++ +++ K + L+ + + Sbjct: 1065 MQAVDRV-----HRIGQQNEVKVYRILVKDSVEDRIMEIQTKKREAIEAALDGKASKGMG 1119 Query: 205 V 205 + Sbjct: 1120 L 1120 >gi|9632111|ref|NP_048904.1| hypothetical protein PBCV1_A548L [Paramecium bursaria Chlorella virus 1] gi|2447053|gb|AAC96911.1| similar to Caenorhabditis transcription activator, corresponds to Swiss-Prot Accession Number P41877 [Paramecium bursaria Chlorella virus 1] Length = 458 Score = 91.9 bits (227), Expect = 5e-17, Method: Composition-based stats. Identities = 45/220 (20%), Positives = 81/220 (36%), Gaps = 32/220 (14%) Query: 8 QRELYCDLQGEN---IEAFNS----------ASKTVKCLQLANGA--VYYDEEKHWKEVH 52 +++LY +L + A+N+ + ++ Q +Y + E E + Sbjct: 223 EKDLYAELVENGKILLRAYNAYGDGEGRMRLLEQLMRMRQCVTNPQILYANSEDEKWEGN 282 Query: 53 DEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAF---------PQGRTLDKDPCT-IQ 102 K+ L I+ ++ ++ ++ +++ G+T + I+ Sbjct: 283 RTKLNMLRKEIQNNPVEKTLIFCNWICEMDAIREMLHSIGHKSVTLNGKTPNSQRDVNIK 342 Query: 103 EWNEG-KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGF 161 +NE I S G GLNLQ + + SL W+ Q I R + G Sbjct: 343 SFNEDNDINFFIIQIESGGIGLNLQVATRVFI-NSLSWNATTEIQAIAR-----AHRIGQ 396 Query: 162 KRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 V V LI NT DE VL + K I + + + E Sbjct: 397 TANVIVKRLIIDNTFDEHVLNLQQKKLEIASEIFDDKRIE 436 >gi|194206164|ref|XP_001500332.2| PREDICTED: similar to DNA excision repair protein ERCC-6 (ATP-dependent helicase ERCC6) (Cockayne syndrome protein CSB) [Equus caballus] Length = 1461 Score = 91.9 bits (227), Expect = 5e-17, Method: Composition-based stats. Identities = 45/215 (20%), Positives = 76/215 (35%), Gaps = 33/215 (15%) Query: 2 KQYHKF--QRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKAL 59 K Y F +E+Y L G+ S V ++ N Y WK K+ + Sbjct: 766 KVYQNFIDSKEVYGILNGD----MQVFSGLVALRKICNHPGY------WKR--SGKMIVV 813 Query: 60 EVIIE--KANAAPIIVAYHFNSDLARLQK----------AFPQGRTLDKDPCTIQEWNEG 107 E +++ +++ L L+ T+ I +NE Sbjct: 814 ESLLKIWHKQGQRVLLFSQSRQMLDILEVFLRAQKYSYLKMDGTTTVASRQPLITRYNED 873 Query: 108 -KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVF 166 I + G G+NL G N ++ + W+ Q ER + G K+ V Sbjct: 874 TSIFVFLLTTRVGGIGVNLT-GANRVIIYDPDWNPSTDTQARERAW-----RIGQKKQVT 927 Query: 167 VYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 VY L+ TI+E + R K + + +L K+ Sbjct: 928 VYRLLTAGTIEEKIYHRQIFKQFLTNRVLKDPKQR 962 >gi|194038394|ref|XP_001926393.1| PREDICTED: chromodomain-helicase-DNA-binding protein 2 [Sus scrofa] Length = 1828 Score = 91.9 bits (227), Expect = 5e-17, Method: Composition-based stats. Identities = 25/161 (15%), Positives = 59/161 (36%), Gaps = 20/161 (12%) Query: 52 HDEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQKAF---------PQGRTLDK-DPC 99 K+ L+ ++ + +++ L L + G + Sbjct: 789 SSGKLILLDKLLTRLRERGNRVLIFSQMVRMLDILAEYLTIKHYPFQRLDGSIKGEIRKQ 848 Query: 100 TIQEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 + +N + + G G+NL + +V F W+ + Q R Sbjct: 849 ALDHFNADGSEDFCFLLSTRAGGLGINL-ASADTVVIFDSDWNPQNDLQAQAR-----AH 902 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNAL 198 + G K+ V +Y L+ + T++E +++R + K + L++ + Sbjct: 903 RIGQKKQVNIYRLVTKGTVEEEIIERAKKKMVLDHLVIQRM 943 >gi|196000388|ref|XP_002110062.1| hypothetical protein TRIADDRAFT_53632 [Trichoplax adhaerens] gi|190588186|gb|EDV28228.1| hypothetical protein TRIADDRAFT_53632 [Trichoplax adhaerens] Length = 1207 Score = 91.9 bits (227), Expect = 5e-17, Method: Composition-based stats. Identities = 32/171 (18%), Positives = 61/171 (35%), Gaps = 21/171 (12%) Query: 44 EEKHWKEVHDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQK----------AFPQG 91 + HW + K+ AL+ ++ + N +++ L+K Sbjct: 732 SDGHW--LLSGKMIALKTLLSLWRENKHRVLLFTQTRQMANILEKFVKSENYPYMRMDGT 789 Query: 92 RTLDKDPCTIQEWNEGK-IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 + ++ +N I + G GLNL G + +V F W+ Q ER Sbjct: 790 TNISSRQSLVKLFNRNNAIFIFILTTRVGGLGLNLT-GADRVVIFDPDWNPSTDMQARER 848 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 + G + V +Y + TI+E + R K + + +L K+ Sbjct: 849 AW-----RVGQTKEVTIYRFLTSGTIEEKIYHRQVFKEFLTNRILKNPKQR 894 >gi|149691012|ref|XP_001488063.1| PREDICTED: chromodomain helicase DNA binding protein 2 isoform 1 [Equus caballus] Length = 1828 Score = 91.9 bits (227), Expect = 5e-17, Method: Composition-based stats. Identities = 25/161 (15%), Positives = 59/161 (36%), Gaps = 20/161 (12%) Query: 52 HDEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQKAF---------PQGRTLDK-DPC 99 K+ L+ ++ + +++ L L + G + Sbjct: 789 SSGKLILLDKLLTRLRERGNRVLIFSQMVRMLDILAEYLTIKHYPFQRLDGSIKGEIRKQ 848 Query: 100 TIQEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 + +N + + G G+NL + +V F W+ + Q R Sbjct: 849 ALDHFNADGSEDFCFLLSTRAGGLGINL-ASADTVVIFDSDWNPQNDLQAQAR-----AH 902 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNAL 198 + G K+ V +Y L+ + T++E +++R + K + L++ + Sbjct: 903 RIGQKKQVNIYRLVTKGTVEEEIIERAKKKMVLDHLVIQRM 943 >gi|73951141|ref|XP_859244.1| PREDICTED: similar to Chromodomain-helicase-DNA-binding protein 2 (CHD-2) isoform 9 [Canis familiaris] Length = 1807 Score = 91.9 bits (227), Expect = 5e-17, Method: Composition-based stats. Identities = 25/161 (15%), Positives = 59/161 (36%), Gaps = 20/161 (12%) Query: 52 HDEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQKAF---------PQGRTLDK-DPC 99 K+ L+ ++ + +++ L L + G + Sbjct: 774 SSGKLILLDKLLTRLRERGNRVLIFSQMVRMLDILAEYLTIKHYPFQRLDGSIKGEIRKQ 833 Query: 100 TIQEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 + +N + + G G+NL + +V F W+ + Q R Sbjct: 834 ALDHFNADGSEDFCFLLSTRAGGLGINL-ASADTVVIFDSDWNPQNDLQAQAR-----AH 887 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNAL 198 + G K+ V +Y L+ + T++E +++R + K + L++ + Sbjct: 888 RIGQKKQVNIYRLVTKGTVEEEIIERAKKKMVLDHLVIQRM 928 >gi|73951125|ref|XP_849509.1| PREDICTED: similar to Chromodomain-helicase-DNA-binding protein 2 (CHD-2) isoform 2 [Canis familiaris] gi|73951131|ref|XP_536179.2| PREDICTED: similar to Chromodomain-helicase-DNA-binding protein 2 (CHD-2) isoform 1 [Canis familiaris] Length = 1827 Score = 91.9 bits (227), Expect = 5e-17, Method: Composition-based stats. Identities = 25/161 (15%), Positives = 59/161 (36%), Gaps = 20/161 (12%) Query: 52 HDEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQKAF---------PQGRTLDK-DPC 99 K+ L+ ++ + +++ L L + G + Sbjct: 789 SSGKLILLDKLLTRLRERGNRVLIFSQMVRMLDILAEYLTIKHYPFQRLDGSIKGEIRKQ 848 Query: 100 TIQEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 + +N + + G G+NL + +V F W+ + Q R Sbjct: 849 ALDHFNADGSEDFCFLLSTRAGGLGINL-ASADTVVIFDSDWNPQNDLQAQAR-----AH 902 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNAL 198 + G K+ V +Y L+ + T++E +++R + K + L++ + Sbjct: 903 RIGQKKQVNIYRLVTKGTVEEEIIERAKKKMVLDHLVIQRM 943 >gi|58262478|ref|XP_568649.1| DNA dependent ATPase [Cryptococcus neoformans var. neoformans JEC21] gi|57230823|gb|AAW47132.1| DNA dependent ATPase, putative [Cryptococcus neoformans var. neoformans JEC21] Length = 1036 Score = 91.9 bits (227), Expect = 5e-17, Method: Composition-based stats. Identities = 29/101 (28%), Positives = 43/101 (42%), Gaps = 8/101 (7%) Query: 96 KDPCTIQEWN--EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGV 153 + I + E ++ + G GLNL N +V F W+ + Q ++R Sbjct: 686 ERQEMIDRFQDLERDHFIMLISTRAGGVGLNLT-AANKVVIFDPSWNPADDLQAMDR--- 741 Query: 154 TRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 + G KR V VY LI Q TI+EL+ +R K L Sbjct: 742 --AFRIGQKRTVEVYRLIGQGTIEELIYERQVQKQQSARQL 780 >gi|73951149|ref|XP_859392.1| PREDICTED: similar to Chromodomain-helicase-DNA-binding protein 2 (CHD-2) isoform 13 [Canis familiaris] Length = 1814 Score = 91.9 bits (227), Expect = 5e-17, Method: Composition-based stats. Identities = 25/161 (15%), Positives = 59/161 (36%), Gaps = 20/161 (12%) Query: 52 HDEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQKAF---------PQGRTLDK-DPC 99 K+ L+ ++ + +++ L L + G + Sbjct: 774 SSGKLILLDKLLTRLRERGNRVLIFSQMVRMLDILAEYLTIKHYPFQRLDGSIKGEIRKQ 833 Query: 100 TIQEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 + +N + + G G+NL + +V F W+ + Q R Sbjct: 834 ALDHFNADGSEDFCFLLSTRAGGLGINL-ASADTVVIFDSDWNPQNDLQAQAR-----AH 887 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNAL 198 + G K+ V +Y L+ + T++E +++R + K + L++ + Sbjct: 888 RIGQKKQVNIYRLVTKGTVEEEIIERAKKKMVLDHLVIQRM 928 >gi|73951129|ref|XP_859020.1| PREDICTED: similar to Chromodomain-helicase-DNA-binding protein 2 (CHD-2) isoform 4 [Canis familiaris] Length = 1714 Score = 91.9 bits (227), Expect = 5e-17, Method: Composition-based stats. Identities = 25/161 (15%), Positives = 59/161 (36%), Gaps = 20/161 (12%) Query: 52 HDEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQKAF---------PQGRTLDK-DPC 99 K+ L+ ++ + +++ L L + G + Sbjct: 676 SSGKLILLDKLLTRLRERGNRVLIFSQMVRMLDILAEYLTIKHYPFQRLDGSIKGEIRKQ 735 Query: 100 TIQEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 + +N + + G G+NL + +V F W+ + Q R Sbjct: 736 ALDHFNADGSEDFCFLLSTRAGGLGINL-ASADTVVIFDSDWNPQNDLQAQAR-----AH 789 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNAL 198 + G K+ V +Y L+ + T++E +++R + K + L++ + Sbjct: 790 RIGQKKQVNIYRLVTKGTVEEEIIERAKKKMVLDHLVIQRM 830 >gi|67474889|ref|XP_653178.1| chromodomain-helicase-DNA-binding protein [Entamoeba histolytica HM-1:IMSS] gi|56470108|gb|EAL47792.1| chromodomain-helicase-DNA-binding protein, putative [Entamoeba histolytica HM-1:IMSS] Length = 1641 Score = 91.9 bits (227), Expect = 5e-17, Method: Composition-based stats. Identities = 29/157 (18%), Positives = 60/157 (38%), Gaps = 18/157 (11%) Query: 52 HDEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQKAF---------PQGRTLDKDPC- 99 K+ L+ ++ K N +++ L L+K G D Sbjct: 964 SSGKMVLLDKLLPKLNADGHKVLIFSQLKGVLDILEKYLSYKKYTYERLDGSVRSNDRQN 1023 Query: 100 TIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQA 159 I + +G+ + + G G+NL + ++ + W+ + Q R + Sbjct: 1024 AIDRFMKGERFVFLLCTRAGGIGINLSE-ADTVIIYDSDWNPQNDLQAQARC-----HRI 1077 Query: 160 GFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 G K+ V VY L+++NT + + +R K + +L+ Sbjct: 1078 GQKKEVKVYRLVSKNTYERYMFERASMKLGLDQAILS 1114 >gi|322701089|gb|EFY92840.1| chromo domain-containing protein 1 [Metarhizium acridum CQMa 102] Length = 1663 Score = 91.9 bits (227), Expect = 5e-17, Method: Composition-based stats. Identities = 34/174 (19%), Positives = 68/174 (39%), Gaps = 20/174 (11%) Query: 38 GAVYYDEEKHWKEVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQKAFP----QG 91 G+V +++ K+ L+ ++ K + +++ L L + Sbjct: 774 GSVRREDQIKGLITSSGKMMLLDQLLSKLKKDGHRVLIFSQMVKMLDILGDYLSLRGYKF 833 Query: 92 RTLDKD------PCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEE 143 + LD I +N + G G+NL + ++ F W+ + Sbjct: 834 QRLDGTIAAGPRRMAINHFNADDSEDFCFLLSTRAGGLGINLMT-ADTVIIFDSDWNPQA 892 Query: 144 HQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 Q + R + G KR V +Y L+++ T++E VL+R R K ++ L + A Sbjct: 893 DLQAMAR-----AHRIGQKRPVNIYRLVSKETVEEEVLERARNKLLLEYLTIQA 941 >gi|295674669|ref|XP_002797880.1| SNF2 family ATP-dependent chromatin-remodeling factor snf21 [Paracoccidioides brasiliensis Pb01] gi|226280530|gb|EEH36096.1| SNF2 family ATP-dependent chromatin-remodeling factor snf21 [Paracoccidioides brasiliensis Pb01] Length = 1332 Score = 91.9 bits (227), Expect = 5e-17, Method: Composition-based stats. Identities = 40/225 (17%), Positives = 78/225 (34%), Gaps = 33/225 (14%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQL---ANGA----VYYDEEKHWKEVHD- 53 K Y + + + +QL N DE + +D Sbjct: 691 KLYKQLVTHNKLVVSDGKGGKTGMRGLSNMLMQLRKLCNHPFVFESVEDEMNPGRATNDL 750 Query: 54 -----EKIKALEVIIEK--ANAAPIIVAYHFNSD---------LARLQKAFPQGRTLDKD 97 K + L+ I+ K A+ +++ + L ++ G T D Sbjct: 751 IWRTAGKFELLDRILPKFKASGHRVLMFFQMTQIMNIMEDFLRLRGMKYLRLDGSTKSDD 810 Query: 98 PCTI-QEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 + +E+N + + G GLNLQ + ++ + W+ + Q Sbjct: 811 RSDLLKEFNAPGSEYFCFLLSTRAGGLGLNLQT-ADTVIIYDSDWNPHQDLQA-----QD 864 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 R + G K V + LI N+++E +L+R + K + ++ A K Sbjct: 865 RAHRIGQKNEVRILRLITSNSVEERILERAQFKLDMDGKVIQAGK 909 >gi|291233864|ref|XP_002736872.1| PREDICTED: excision repair cross-complementing rodent repair deficiency, complementation group 6-like [Saccoglossus kowalevskii] Length = 1503 Score = 91.9 bits (227), Expect = 5e-17, Method: Composition-based stats. Identities = 28/162 (17%), Positives = 57/162 (35%), Gaps = 19/162 (11%) Query: 53 DEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQK----------AFPQGRTLDKDPCT 100 K+ +E +++ K +++ L L + Sbjct: 865 SGKLIVIESLLKLWKKQGHRVLLFTQSKQMLDILDSFVTSRGYNYMRMDGSTPISSRQPA 924 Query: 101 IQEWNEGK-IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQA 159 + +N+ K + + G G+NL G + +V + W+ Q ER + Sbjct: 925 VNRFNQDKSVFVFLLTTRVGGLGVNL-IGADRVVIYDPDWNPSTDMQARERAW-----RI 978 Query: 160 GFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 G + V +Y L+ TI+E + R K + + +L K+ Sbjct: 979 GQNKQVTIYRLLTSGTIEEKIYHRQIFKQFLTNRVLKDPKQR 1020 >gi|303278366|ref|XP_003058476.1| SNF2 super family [Micromonas pusilla CCMP1545] gi|226459636|gb|EEH56931.1| SNF2 super family [Micromonas pusilla CCMP1545] Length = 1251 Score = 91.9 bits (227), Expect = 5e-17, Method: Composition-based stats. Identities = 37/175 (21%), Positives = 63/175 (36%), Gaps = 34/175 (19%) Query: 56 IKALEVIIEKANAA--PIIVAYHFNSDLA----RLQK-AFPQGRTLDKDPCTIQEWN--- 105 ++AL + A+ IV + S + RL+K F + L P T + N Sbjct: 1059 LRALREMRSGADGHLNKAIVFSQYTSMIDIAEWRLKKEKFVVAKLLGSMPVTQRAANLKA 1118 Query: 106 ---EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER------------ 150 + + ++ S G GLNLQ N + WW+ Q + Sbjct: 1119 FRDDPNVSVILMSLKSGGEGLNLQ-AANYVFVLEPWWNPAVEMQARDAPAGPRGFILYFT 1177 Query: 151 --------IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 V R + G +RAV +NTI+E ++Q K + + ++ Sbjct: 1178 HPSVSTFDRAVMRAHRIGQRRAVTAVRFSTKNTIEERMMQLQEKKRLVFEGCMDG 1232 >gi|242002592|ref|XP_002435939.1| DNA excision repair protein ERCC-6, putative [Ixodes scapularis] gi|215499275|gb|EEC08769.1| DNA excision repair protein ERCC-6, putative [Ixodes scapularis] Length = 982 Score = 91.9 bits (227), Expect = 5e-17, Method: Composition-based stats. Identities = 30/162 (18%), Positives = 58/162 (35%), Gaps = 19/162 (11%) Query: 53 DEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKA----------FPQGRTLDKDPCT 100 K+ +E +++ K +++ L L+K + Sbjct: 327 SGKMAVVESLLKLWKRQGHRVLLFTQSRQMLLILEKFVQDQGYKYMVMTGSTPIASRQPA 386 Query: 101 IQEWNEG-KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQA 159 I ++N + + G G+NL G + +V + W+ Q ER + Sbjct: 387 INKFNADTSVFVFLLTTRVGGLGVNLT-GADRVVIYDPDWNPSTDTQARERAW-----RI 440 Query: 160 GFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 G R V +Y L+ TI+E + R K + + +L K+ Sbjct: 441 GQLRDVTIYRLLTAGTIEEKIYHRQIFKQFLTNRVLKDPKQR 482 >gi|190348362|gb|EDK40804.2| hypothetical protein PGUG_04902 [Meyerozyma guilliermondii ATCC 6260] Length = 1034 Score = 91.9 bits (227), Expect = 5e-17, Method: Composition-based stats. Identities = 41/230 (17%), Positives = 84/230 (36%), Gaps = 39/230 (16%) Query: 6 KFQRELYCDLQGENIEAFNSAS--------KTVKCLQL---ANGAVYYD--------EEK 46 + Q Y L ++I+A N +QL N +D Sbjct: 363 EMQIRWYKKLLEKDIDAVNGVVGKREGKTRLLNIVMQLRKCCNHPYLFDGAEPGPPYTTD 422 Query: 47 HWKEVHDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQ---------KAFPQGRTLD 95 + K+ L+ +++ + + +++ + L L+ G T Sbjct: 423 EHLAYNSGKMIILDKMLKKFREQGSRVLIFSQMSRLLDILEDYCYLRDYEYCRIDGSTAH 482 Query: 96 KDP-CTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIG 152 +D I +N + + G G+NL +I++ + W+ + Q ++R Sbjct: 483 EDRIEAIDSYNAPDSDKFIFLLTTRAGGLGINLT-SADIVILYDSDWNPQADLQAMDR-- 539 Query: 153 VTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKET 202 + G K+ V VY + +N I+E VL+R K + L++ ++ T Sbjct: 540 ---AHRIGQKKQVHVYRFVTENAIEEKVLERAAQKLRLDQLVIQQGRQVT 586 >gi|114658991|ref|XP_001170635.1| PREDICTED: chromodomain helicase DNA binding protein 2 isoform 2 [Pan troglodytes] gi|114658993|ref|XP_001170689.1| PREDICTED: chromodomain helicase DNA binding protein 2 isoform 5 [Pan troglodytes] Length = 1730 Score = 91.9 bits (227), Expect = 5e-17, Method: Composition-based stats. Identities = 25/161 (15%), Positives = 59/161 (36%), Gaps = 20/161 (12%) Query: 52 HDEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQKAF---------PQGRTLDK-DPC 99 K+ L+ ++ + +++ L L + G + Sbjct: 691 SSGKLILLDKLLTRLRERGNRVLIFSQMVRMLDILAEYLTIKHYPFQRLDGSIKGEIRKQ 750 Query: 100 TIQEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 + +N + + G G+NL + +V F W+ + Q R Sbjct: 751 ALDHFNADGSEDFCFLLSTRAGGLGINL-ASADTVVIFDSDWNPQNDLQAQAR-----AH 804 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNAL 198 + G K+ V +Y L+ + T++E +++R + K + L++ + Sbjct: 805 RIGQKKQVNIYRLVTKGTVEEEIIERAKKKMVLDHLVIQRM 845 >gi|46125779|ref|XP_387443.1| hypothetical protein FG07267.1 [Gibberella zeae PH-1] Length = 1895 Score = 91.9 bits (227), Expect = 5e-17, Method: Composition-based stats. Identities = 32/154 (20%), Positives = 65/154 (42%), Gaps = 18/154 (11%) Query: 55 KIKALEVIIEKANAA--PIIVAYHFNSDLARLQKAFP-QGRTLDK---------DPCTIQ 102 K + L ++ +A ++V L L+ QGRT+ + ++ Sbjct: 1287 KTELLTTVLNEAREVNDKVLVFSQSLITLDYLEDMCKNQGRTVSRMDGKTPVAVRQQQVK 1346 Query: 103 EWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFK 162 ++N+G + A+ G GLN+ +G N +V F + + QQ + R + G + Sbjct: 1347 DFNQGSKEVFLISTAAGGVGLNI-HGANRVVIFDIRHNPSHEQQAVGR-----AYRIGQQ 1400 Query: 163 RAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + VFVY + T ++ + R K + +++ Sbjct: 1401 KKVFVYRFMVAGTFEDNLNNRQVFKMQLASRVVD 1434 >gi|42567315|ref|NP_194918.2| chromatin remodeling factor, putative [Arabidopsis thaliana] Length = 1202 Score = 91.9 bits (227), Expect = 5e-17, Method: Composition-based stats. Identities = 30/191 (15%), Positives = 70/191 (36%), Gaps = 30/191 (15%) Query: 29 TVKCLQLANGAVYYDEEKHWKEVHDE----------KIKALEVIIEKA--NAAPIIVAYH 76 +K Q+ + + + E +E K++ L+ ++ K +++ Sbjct: 489 LMKLRQVCSHPYLLPDFEPRFEDANEAFTKLLEASGKLQLLDKMMVKLKEQGHRVLIYTQ 548 Query: 77 FNSDLARLQKAF---------PQGRTLDKDPCT-IQEWN--EGKIPLLFAHPASCGHGLN 124 F L L+ F G+ + I +N + G G+N Sbjct: 549 FQHTLYLLEDYFTFKNWNYERIDGKISGPERQVRIDRFNAENSNRFCFLLSTRAGGIGIN 608 Query: 125 LQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRL 184 L + ++ + W+ Q + R+ + G V +Y LI + T++E +++ Sbjct: 609 L-ATADTVIIYDSDWNPHADLQAMARV-----HRLGQTNKVMIYRLIHKGTVEERMMEIT 662 Query: 185 RTKSTIQDLLL 195 + K ++ L++ Sbjct: 663 KNKMLLEHLVV 673 >gi|114658975|ref|XP_001170775.1| PREDICTED: chromodomain helicase DNA binding protein 2 isoform 9 [Pan troglodytes] Length = 1834 Score = 91.9 bits (227), Expect = 5e-17, Method: Composition-based stats. Identities = 25/161 (15%), Positives = 59/161 (36%), Gaps = 20/161 (12%) Query: 52 HDEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQKAF---------PQGRTLDK-DPC 99 K+ L+ ++ + +++ L L + G + Sbjct: 795 SSGKLILLDKLLTRLRERGNRVLIFSQMVRMLDILAEYLTIKHYPFQRLDGSIKGEIRKQ 854 Query: 100 TIQEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 + +N + + G G+NL + +V F W+ + Q R Sbjct: 855 ALDHFNADGSEDFCFLLSTRAGGLGINL-ASADTVVIFDSDWNPQNDLQAQAR-----AH 908 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNAL 198 + G K+ V +Y L+ + T++E +++R + K + L++ + Sbjct: 909 RIGQKKQVNIYRLVTKGTVEEEIIERAKKKMVLDHLVIQRM 949 >gi|189458810|ref|NP_001074814.2| chromodomain helicase DNA binding protein 2 [Mus musculus] Length = 1827 Score = 91.9 bits (227), Expect = 5e-17, Method: Composition-based stats. Identities = 25/161 (15%), Positives = 59/161 (36%), Gaps = 20/161 (12%) Query: 52 HDEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQKAF---------PQGRTLDK-DPC 99 K+ L+ ++ + +++ L L + G + Sbjct: 789 SSGKLILLDKLLTRLRERGNRVLIFSQMVRMLDILAEYLTIKHYPFQRLDGSIKGEIRKQ 848 Query: 100 TIQEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 + +N + + G G+NL + +V F W+ + Q R Sbjct: 849 ALDHFNADGSEDFCFLLSTRAGGLGINL-ASADTVVIFDSDWNPQNDLQAQAR-----AH 902 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNAL 198 + G K+ V +Y L+ + T++E +++R + K + L++ + Sbjct: 903 RIGQKKQVNIYRLVTKGTVEEEIIERAKKKMVLDHLVIQRM 943 >gi|73951153|ref|XP_859466.1| PREDICTED: similar to Chromodomain-helicase-DNA-binding protein 2 (CHD-2) isoform 15 [Canis familiaris] Length = 1812 Score = 91.9 bits (227), Expect = 5e-17, Method: Composition-based stats. Identities = 25/161 (15%), Positives = 59/161 (36%), Gaps = 20/161 (12%) Query: 52 HDEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQKAF---------PQGRTLDK-DPC 99 K+ L+ ++ + +++ L L + G + Sbjct: 774 SSGKLILLDKLLTRLRERGNRVLIFSQMVRMLDILAEYLTIKHYPFQRLDGSIKGEIRKQ 833 Query: 100 TIQEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 + +N + + G G+NL + +V F W+ + Q R Sbjct: 834 ALDHFNADGSEDFCFLLSTRAGGLGINL-ASADTVVIFDSDWNPQNDLQAQAR-----AH 887 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNAL 198 + G K+ V +Y L+ + T++E +++R + K + L++ + Sbjct: 888 RIGQKKQVNIYRLVTKGTVEEEIIERAKKKMVLDHLVIQRM 928 >gi|320164135|gb|EFW41034.1| smarca2 protein [Capsaspora owczarzaki ATCC 30864] Length = 1466 Score = 91.9 bits (227), Expect = 5e-17, Method: Composition-based stats. Identities = 31/177 (17%), Positives = 61/177 (34%), Gaps = 23/177 (12%) Query: 37 NGAVYYDEEKHWKEVHDEKIKALEVIIEKAN--AAPIIVAYHFNSDLAR---------LQ 85 GA+ K + + ++ K + +++ L + Sbjct: 893 GGAIIT---GSLVVRASGKFEMFDRLLTKLHRTGHRVLLFSQMTQCLTILEDYCNYNNIL 949 Query: 86 KAFPQGRTL-DKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLE 142 G T D+ + ++N P L + G GLNLQ + +V F W+ Sbjct: 950 YLRLDGNTKPDERAELLTKFNAPNSPYNLFLLSTRAGGLGLNLQT-ADTVVIFDSDWNPH 1008 Query: 143 EHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 + Q R + G K V V + ++++E +L + K + ++ A K Sbjct: 1009 QDLQA-----QDRAHRIGQKNEVRVIRFVTADSVEERMLAAAQFKLDMDKKVIQAGK 1060 >gi|118421089|ref|NP_001262.3| chromodomain-helicase-DNA-binding protein 2 isoform 1 [Homo sapiens] gi|119370320|sp|O14647|CHD2_HUMAN RecName: Full=Chromodomain-helicase-DNA-binding protein 2; Short=CHD-2; AltName: Full=ATP-dependent helicase CHD2 gi|225000176|gb|AAI72425.1| Chromodomain helicase DNA binding protein 2 [synthetic construct] Length = 1828 Score = 91.9 bits (227), Expect = 5e-17, Method: Composition-based stats. Identities = 25/161 (15%), Positives = 59/161 (36%), Gaps = 20/161 (12%) Query: 52 HDEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQKAF---------PQGRTLDK-DPC 99 K+ L+ ++ + +++ L L + G + Sbjct: 789 SSGKLILLDKLLTRLRERGNRVLIFSQMVRMLDILAEYLTIKHYPFQRLDGSIKGEIRKQ 848 Query: 100 TIQEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 + +N + + G G+NL + +V F W+ + Q R Sbjct: 849 ALDHFNADGSEDFCFLLSTRAGGLGINL-ASADTVVIFDSDWNPQNDLQAQAR-----AH 902 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNAL 198 + G K+ V +Y L+ + T++E +++R + K + L++ + Sbjct: 903 RIGQKKQVNIYRLVTKGTVEEEIIERAKKKMVLDHLVIQRM 943 >gi|114658977|ref|XP_001170676.1| PREDICTED: chromodomain helicase DNA binding protein 2 isoform 4 [Pan troglodytes] gi|114658979|ref|XP_001170719.1| PREDICTED: chromodomain helicase DNA binding protein 2 isoform 6 [Pan troglodytes] gi|114658981|ref|XP_001170756.1| PREDICTED: chromodomain helicase DNA binding protein 2 isoform 8 [Pan troglodytes] Length = 1828 Score = 91.9 bits (227), Expect = 5e-17, Method: Composition-based stats. Identities = 25/161 (15%), Positives = 59/161 (36%), Gaps = 20/161 (12%) Query: 52 HDEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQKAF---------PQGRTLDK-DPC 99 K+ L+ ++ + +++ L L + G + Sbjct: 789 SSGKLILLDKLLTRLRERGNRVLIFSQMVRMLDILAEYLTIKHYPFQRLDGSIKGEIRKQ 848 Query: 100 TIQEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 + +N + + G G+NL + +V F W+ + Q R Sbjct: 849 ALDHFNADGSEDFCFLLSTRAGGLGINL-ASADTVVIFDSDWNPQNDLQAQAR-----AH 902 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNAL 198 + G K+ V +Y L+ + T++E +++R + K + L++ + Sbjct: 903 RIGQKKQVNIYRLVTKGTVEEEIIERAKKKMVLDHLVIQRM 943 >gi|322706938|gb|EFY98517.1| chromo domain-containing protein 1 [Metarhizium anisopliae ARSEF 23] Length = 1668 Score = 91.9 bits (227), Expect = 5e-17, Method: Composition-based stats. Identities = 34/174 (19%), Positives = 68/174 (39%), Gaps = 20/174 (11%) Query: 38 GAVYYDEEKHWKEVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQKAFP----QG 91 G+V +++ K+ L+ ++ K + +++ L L + Sbjct: 762 GSVRREDQIKGLITSSGKMMLLDQLLSKLKKDGHRVLIFSQMVKMLDILGDYLSLRGYKF 821 Query: 92 RTLDKD------PCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEE 143 + LD I +N + G G+NL + ++ F W+ + Sbjct: 822 QRLDGTIAAGPRRMAINHFNADDSEDFCFLLSTRAGGLGINLMT-ADTVIIFDSDWNPQA 880 Query: 144 HQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 Q + R + G KR V +Y L+++ T++E VL+R R K ++ L + A Sbjct: 881 DLQAMAR-----AHRIGQKRPVNIYRLVSKETVEEEVLERARNKLLLEYLTIQA 929 >gi|119613505|gb|EAW93099.1| hCG32740, isoform CRA_e [Homo sapiens] Length = 1356 Score = 91.9 bits (227), Expect = 5e-17, Method: Composition-based stats. Identities = 36/172 (20%), Positives = 63/172 (36%), Gaps = 21/172 (12%) Query: 43 DEEKHWKEVHDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQK----------AFPQ 90 D+ +WK K+ +E +++ +++ L L+ Sbjct: 830 DQFGYWKR--SGKMIVVESLLKIWHKQGQRVLLFSQSRQMLDILEVFLRAQKYTYLKMDG 887 Query: 91 GRTLDKDPCTIQEWNEG-KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIE 149 T+ I +NE I + G G+NL G N +V + W+ Q E Sbjct: 888 TTTIASRQPLITRYNEDTSIFVFLLTTRVGGLGVNLT-GANRVVIYDPDWNPSTDTQARE 946 Query: 150 RIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 R + G K+ V VY L+ TI+E + R K + + +L K+ Sbjct: 947 RAW-----RIGQKKQVTVYRLLTAGTIEEKIYHRQIFKQFLTNRVLKDPKQR 993 >gi|114635114|ref|XP_507781.2| PREDICTED: excision repair cross-complementing rodent repair deficiency, complementation group 6 [Pan troglodytes] Length = 1491 Score = 91.5 bits (226), Expect = 5e-17, Method: Composition-based stats. Identities = 36/172 (20%), Positives = 63/172 (36%), Gaps = 21/172 (12%) Query: 43 DEEKHWKEVHDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQK----------AFPQ 90 D+ +WK K+ +E +++ +++ L L+ Sbjct: 828 DQFGYWKR--SGKMIVVESLLKIWHKQGQRVLLFSQSRQMLDILEVFLRAQKYTYLKMDG 885 Query: 91 GRTLDKDPCTIQEWNEG-KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIE 149 T+ I +NE I + G G+NL G N +V + W+ Q E Sbjct: 886 TTTIASRQPLITRYNEDTSIFVFLLTTRVGGLGVNLT-GANRVVIYDPDWNPSTDTQARE 944 Query: 150 RIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 R + G K+ V VY L+ TI+E + R K + + +L K+ Sbjct: 945 RAW-----RIGQKKQVTVYRLLTAGTIEEKIYHRQIFKQFLTNRVLKDPKQR 991 >gi|4557565|ref|NP_000115.1| DNA excision repair protein ERCC-6 [Homo sapiens] gi|416959|sp|Q03468|ERCC6_HUMAN RecName: Full=DNA excision repair protein ERCC-6; AltName: Full=ATP-dependent helicase ERCC6; AltName: Full=Cockayne syndrome protein CSB gi|182181|gb|AAA52397.1| excision repair protein [Homo sapiens] gi|27501924|gb|AAO13487.1| excision repair cross-complementing rodent repair deficiency, complementation group 6 [Homo sapiens] gi|55661841|emb|CAH70291.1| excision repair cross-complementing rodent repair deficiency, complementation group 6 [Homo sapiens] gi|119613500|gb|EAW93094.1| hCG32740, isoform CRA_a [Homo sapiens] gi|119613503|gb|EAW93097.1| hCG32740, isoform CRA_a [Homo sapiens] Length = 1493 Score = 91.5 bits (226), Expect = 5e-17, Method: Composition-based stats. Identities = 36/172 (20%), Positives = 63/172 (36%), Gaps = 21/172 (12%) Query: 43 DEEKHWKEVHDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQK----------AFPQ 90 D+ +WK K+ +E +++ +++ L L+ Sbjct: 830 DQFGYWKR--SGKMIVVESLLKIWHKQGQRVLLFSQSRQMLDILEVFLRAQKYTYLKMDG 887 Query: 91 GRTLDKDPCTIQEWNEG-KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIE 149 T+ I +NE I + G G+NL G N +V + W+ Q E Sbjct: 888 TTTIASRQPLITRYNEDTSIFVFLLTTRVGGLGVNLT-GANRVVIYDPDWNPSTDTQARE 946 Query: 150 RIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 R + G K+ V VY L+ TI+E + R K + + +L K+ Sbjct: 947 RAW-----RIGQKKQVTVYRLLTAGTIEEKIYHRQIFKQFLTNRVLKDPKQR 993 >gi|311271511|ref|XP_003133156.1| PREDICTED: DNA excision repair protein ERCC-6-like [Sus scrofa] Length = 1481 Score = 91.5 bits (226), Expect = 5e-17, Method: Composition-based stats. Identities = 35/172 (20%), Positives = 63/172 (36%), Gaps = 21/172 (12%) Query: 43 DEEKHWKEVHDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQK----------AFPQ 90 D+ +WK K+ +E +++ +++ L L+ Sbjct: 819 DQFGYWKR--SGKMIVVESLLKIWHKQGQRVLLFSQSRQMLDILEVFLRAQKYSYLKMDG 876 Query: 91 GRTLDKDPCTIQEWNEG-KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIE 149 T+ I +NE I + G G+NL G N ++ + W+ Q E Sbjct: 877 TTTIASRQPLITRYNEDASIFVFLLTTRVGGLGVNLT-GANRVIIYDPDWNPSTDTQARE 935 Query: 150 RIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 R + G K+ V VY L+ TI+E + R K + + +L K+ Sbjct: 936 RAW-----RIGQKKQVTVYRLLTAGTIEEKIYHRQIFKQFLTNRVLKDPKQR 982 >gi|240274068|gb|EER37586.1| RSC complex subunit [Ajellomyces capsulatus H143] Length = 518 Score = 91.5 bits (226), Expect = 5e-17, Method: Composition-based stats. Identities = 30/159 (18%), Positives = 62/159 (38%), Gaps = 20/159 (12%) Query: 55 KIKALEVIIE--KANAAPIIVAYHFNSD---------LARLQKAFPQGRTLDKDPCTI-Q 102 K + L+ I+ +A+ +++ + L ++ G T D + + Sbjct: 38 KFELLDRILPKFQASGHRVLMFFQMTQIMNIMEDFLRLRGMKYLRLDGSTKSDDRSDLLK 97 Query: 103 EWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 E+N + G GLNLQ + ++ + W+ + Q R + G Sbjct: 98 EFNAPGSDYFCFLLSTRAGGLGLNLQT-ADTVIIYDSDWNPHQDLQA-----QDRAHRIG 151 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 K V + LI N+++E +L+ + K + ++ A K Sbjct: 152 QKNEVRILRLITSNSVEERILEAAQFKLDMDGKVIQAGK 190 >gi|316975430|gb|EFV58874.1| domain protein, SNF2 family [Trichinella spiralis] Length = 1023 Score = 91.5 bits (226), Expect = 5e-17, Method: Composition-based stats. Identities = 32/159 (20%), Positives = 67/159 (42%), Gaps = 19/159 (11%) Query: 52 HDEKIKALEVIIEKA--NAAPIIVAYHFN---------SDLARLQKAFPQGRT-LDKDPC 99 K+ AL+ I+ +A +++ F +L +++ G+T + + Sbjct: 851 DSGKLIALDGILAEAKQQGNKVLLFSQFVIVLDVLEEFLNLKQIRYLRLDGQTPVVERQQ 910 Query: 100 TIQEWNEG-KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQ 158 I +N I + + G G+NL N++V + + ++ +R R + Sbjct: 911 LIDMFNSSEDIFIFLLSTRAGGLGINLT-SANVIVLYDIDYNPH-----NDRQAEDRCHR 964 Query: 159 AGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 G K+ V V LI+++T+DE +L K ++ + A Sbjct: 965 VGQKKDVHVIKLISKDTVDESMLACANKKLELERQITTA 1003 >gi|289615410|emb|CBI57811.1| unnamed protein product [Sordaria macrospora] Length = 1126 Score = 91.5 bits (226), Expect = 5e-17, Method: Composition-based stats. Identities = 40/226 (17%), Positives = 82/226 (36%), Gaps = 43/226 (19%) Query: 6 KFQRELYCDLQGENIEAFNSAS--------KTVKCLQLAN-------------GAVYYDE 44 + Q + Y + ++I+A N A +QL G Y + Sbjct: 420 EMQVKWYQKILEKDIDAVNGAGGKRESKTRLLNIVMQLRKCCNHPYLFEGAEPGPPYTTD 479 Query: 45 EKHWKEVHDEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQK----------AFPQGR 92 E + K+ L+ ++++ + +++ + L L+ G Sbjct: 480 EHLV--YNAGKMLVLDKLLKRLQKQGSRVLIFSQMSRLLDILEDYCVFRQYKYCRIDGGT 537 Query: 93 TLDKDPCTIQEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 + I E+N+ + + G G+NL +I+V + W+ + Q ++R Sbjct: 538 AHEDRIAAIDEYNKPGSDKFVFLLTTRAGGLGINLTT-ADIVVLYDSDWNPQADLQAMDR 596 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + G + V VY + N I+E VL+R K + L++ Sbjct: 597 -----AHRIGQTKQVVVYRFVTDNAIEEKVLERAAQKLRLDQLVIQ 637 >gi|115384896|ref|XP_001208995.1| conserved hypothetical protein [Aspergillus terreus NIH2624] gi|114196687|gb|EAU38387.1| conserved hypothetical protein [Aspergillus terreus NIH2624] Length = 1110 Score = 91.5 bits (226), Expect = 5e-17, Method: Composition-based stats. Identities = 34/162 (20%), Positives = 67/162 (41%), Gaps = 19/162 (11%) Query: 46 KHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFP---------QGRTL 94 K+ + + K+ L ++ + AN ++ F + L++ GRT Sbjct: 926 KNDEWMDSGKVNKLCELLRRFTANGDRCLIFSQFTLVMDILEQVLENQHLGFVRLDGRTN 985 Query: 95 DKDPCTI-QEWNEG-KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIG 152 +D +I ++E IP+ + G G+NL N ++ F ++ +E Q Sbjct: 986 VEDRQSILDAFHERTDIPVFLLSTKAGGAGINL-ACANKVIIFDSSFNPQEDVQA----- 1039 Query: 153 VTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 R + G R V V L+ ++TI+E + +TK + + Sbjct: 1040 ENRAHRVGQTREVEVIRLVTKDTIEEQIYALGQTKLALDQAV 1081 >gi|312901374|ref|ZP_07760654.1| protein, SNF2 family [Enterococcus faecalis TX0470] gi|311291537|gb|EFQ70093.1| protein, SNF2 family [Enterococcus faecalis TX0470] Length = 404 Score = 91.5 bits (226), Expect = 6e-17, Method: Composition-based stats. Identities = 41/198 (20%), Positives = 81/198 (40%), Gaps = 30/198 (15%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEV 61 K+Y ++ L E + + +LA+G YY +K +K+ ++ Sbjct: 217 KEYMTVAKDRV--LSDEEYDTPS---------KLAHGLRYYANQK-------DKLDYAQM 258 Query: 62 IIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPC-----TIQEWNEGKIPLLFAHP 116 + E + II+ Y++ ++ L++ + + Q W K + F Sbjct: 259 LCEGTE-SNIIIFYYYQKEIEALKEKIKNKTFFEVNGKHSNLPPKQSWKSLKNSVTFVQY 317 Query: 117 ASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTI 176 + G+ LQY N ++F++ + +++ Q + R + G + V VY I Q TI Sbjct: 318 MAGSAGIELQY-ANTVIFYTPTYSYQDYSQALGR-----AYRNGQTKKVTVYRFITQQTI 371 Query: 177 DELVLQRLRTKSTIQDLL 194 ++ V Q L K + L Sbjct: 372 EQAVYQALENKEDFSEEL 389 >gi|119492467|ref|XP_001263599.1| SNF2 family helicase/ATPase, putative [Neosartorya fischeri NRRL 181] gi|119411759|gb|EAW21702.1| SNF2 family helicase/ATPase, putative [Neosartorya fischeri NRRL 181] Length = 1133 Score = 91.5 bits (226), Expect = 6e-17, Method: Composition-based stats. Identities = 35/162 (21%), Positives = 67/162 (41%), Gaps = 19/162 (11%) Query: 46 KHWKEVHDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAFP---------QGRTL 94 K+ + ++ K+ L +++ + N +V F + L+ GRT Sbjct: 942 KNDEWMNSGKVDKLCELLKRFQENGDRTLVFSQFTLVMDILEHVLETLHLGFVRLDGRTN 1001 Query: 95 DKDPCTI-QEWNEG-KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIG 152 +D +I ++E IP+ + G G+NL N +V F ++ +E Q Sbjct: 1002 VEDRQSILDAFHERTDIPVFLLSTKAGGAGINL-ACANKVVIFDSSFNPQEDVQA----- 1055 Query: 153 VTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 R + G R V V L+ ++TI+E + +TK + + Sbjct: 1056 ENRAHRVGQTREVEVIRLVTKDTIEEQIYALGQTKLALDQAV 1097 >gi|326431585|gb|EGD77155.1| CHD1 protein [Salpingoeca sp. ATCC 50818] Length = 1497 Score = 91.5 bits (226), Expect = 6e-17, Method: Composition-based stats. Identities = 35/171 (20%), Positives = 71/171 (41%), Gaps = 22/171 (12%) Query: 41 YYDEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAF---------- 88 Y +E W+ K++ L ++ K A+ +++ L L+ F Sbjct: 785 YVHDEDLWR--ASGKLELLTRMLPKFKASKHKVLLFSQMTQLLTILEDFFTAIGLTYIRL 842 Query: 89 PQGRTLDKDPCTIQEWNEGK--IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 G + ++ ++E+N I + + G GLNLQ + ++ F W+ + Q Sbjct: 843 DGGTSDEERGRQVKEFNSPDSQIDVFVLSTRAGGLGLNLQT-ADTVIIFDSDWNPHQDLQ 901 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 R + G K V V+ L + N+++E +L+ R K + + ++ A Sbjct: 902 A-----QDRAHRIGQKNEVRVFRLCSINSVEETILEAARFKLNVDEKVIQA 947 >gi|157819999|ref|NP_001100993.1| chromodomain-helicase-DNA-binding protein 2 [Rattus norvegicus] gi|149057183|gb|EDM08506.1| chromodomain helicase DNA binding protein 2 (predicted) [Rattus norvegicus] Length = 1834 Score = 91.5 bits (226), Expect = 6e-17, Method: Composition-based stats. Identities = 25/161 (15%), Positives = 59/161 (36%), Gaps = 20/161 (12%) Query: 52 HDEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQKAF---------PQGRTLDK-DPC 99 K+ L+ ++ + +++ L L + G + Sbjct: 796 SSGKLILLDKLLTRLRERGNRVLIFSQMVRMLDILAEYLTIKHYPFQRLDGSIKGEIRKQ 855 Query: 100 TIQEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 + +N + + G G+NL + +V F W+ + Q R Sbjct: 856 ALDHFNADGSEDFCFLLSTRAGGLGINL-ASADTVVIFDSDWNPQNDLQAQAR-----AH 909 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNAL 198 + G K+ V +Y L+ + T++E +++R + K + L++ + Sbjct: 910 RIGQKKQVNIYRLVTKGTVEEEIIERAKKKMVLDHLVIQRM 950 >gi|148682181|gb|EDL14128.1| mCG2900 [Mus musculus] Length = 1217 Score = 91.5 bits (226), Expect = 6e-17, Method: Composition-based stats. Identities = 29/152 (19%), Positives = 52/152 (34%), Gaps = 20/152 (13%) Query: 53 DEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQKAFPQ--GRTLDKDPCTIQEW---- 104 K+ L ++E+ +V L +++ +TL D W Sbjct: 439 SGKMIFLMSLLERLQDEGHQTLVFSQSIKILNIIERLLKNKHFKTLRIDGTVTHLWEREK 498 Query: 105 ------NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQ 158 + + G GL L +V F W+ Q ++R+ + Sbjct: 499 RIQLFQQNKEYSVFLLTTQVGGVGLTLT-AATRVVIFDPSWNPATDAQAVDRV-----YR 552 Query: 159 AGFKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 G K V VY LI T++E + +R K ++ Sbjct: 553 IGQKENVVVYRLITCGTVEEKIYRRQVFKDSL 584 >gi|149236886|ref|XP_001524320.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL YB-4239] gi|146451855|gb|EDK46111.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL YB-4239] Length = 1082 Score = 91.5 bits (226), Expect = 6e-17, Method: Composition-based stats. Identities = 28/172 (16%), Positives = 69/172 (40%), Gaps = 21/172 (12%) Query: 34 QLANGAVYYDEEKHWKEV-HDEKIKALEVIIE---KANAA-PIIVAYHFN---------- 78 Q++N ++ + K + KI+ +I +AN + II+ F Sbjct: 885 QISNISIIKELTKRDQGFEASAKIEKAIELINNIQQANPSEKIIIFSQFTTLFDLMKLVL 944 Query: 79 SDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLW 138 L L + T++ I+++ + +L + GL L ++++ + Sbjct: 945 DHLKILHLRYDGSMTVEAKNNVIKQFYQSNCNVLLLSLRAGNVGLTLTCANHVIIM-DPF 1003 Query: 139 WDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 W+ +Q ++R + G ++ V V+ ++ NT++ +++ K + Sbjct: 1004 WNPFVEEQAMDR-----AHRIGQEKEVHVHRVLITNTVESRIMELQERKKEL 1050 >gi|118393979|ref|XP_001029383.1| SNF2 family N-terminal domain containing protein [Tetrahymena thermophila] gi|89283583|gb|EAR81720.1| SNF2 family N-terminal domain containing protein [Tetrahymena thermophila SB210] Length = 1811 Score = 91.5 bits (226), Expect = 6e-17, Method: Composition-based stats. Identities = 29/155 (18%), Positives = 64/155 (41%), Gaps = 19/155 (12%) Query: 55 KIKALEVIIEKAN--AAPIIVAYHFNSDLARLQK----------AFPQGRTLDKDPCTIQ 102 K+ + +++K +++ + L + ++ ++ Sbjct: 1294 KLNTMIQLLKKLKQRGDKVLIFTQMSRMLDIFENVLNLFNFTYVRLDGSTKIENRQKVVE 1353 Query: 103 EWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGF 161 +N + +I + S G GLNL G N++VF+ W+ ++R R + G Sbjct: 1354 RFNGDSRIFCFISSTRSGGIGLNLT-GANVVVFYDTDWN-----PAMDRQAQDRCHRIGQ 1407 Query: 162 KRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 R V +Y LI++ TI+E +L + K + + ++ Sbjct: 1408 TRNVSIYRLISEYTIEENILLKSIQKRKLDEYIME 1442 >gi|168027824|ref|XP_001766429.1| SNF2 family DNA-dependent ATPase [Physcomitrella patens subsp. patens] gi|162682338|gb|EDQ68757.1| SNF2 family DNA-dependent ATPase [Physcomitrella patens subsp. patens] Length = 1343 Score = 91.5 bits (226), Expect = 6e-17, Method: Composition-based stats. Identities = 40/213 (18%), Positives = 66/213 (30%), Gaps = 53/213 (24%) Query: 15 LQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKA--NAAPII 72 L GE+I+A + ++++ G V E KI L ++E + Sbjct: 647 LDGEDIQAAEAMTRSLA------GMV----EDDRVHGASCKIDFLMALLENLVTEGHRTL 696 Query: 73 VAYHFNSDLARLQKAFPQG----RTLDKDPCTIQE------------------------- 103 + L +Q R +D Sbjct: 697 IFAQTRKMLDIIQDEILDRGWIFRRIDGTIKAADREQCVQASGVHGAEIEARCELIVRPR 756 Query: 104 ---WN---EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 W + IPL G GL L G N +V W+ Q ++R Sbjct: 757 VAVWEFQSDNDIPLFLLTSQVGGLGLTLT-GANRVVIVDPAWNPSTDNQSVDR-----AY 810 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 + G K+ V VY L+ TI+E + ++ K + Sbjct: 811 RIGQKKNVVVYRLMTCGTIEEKIYRKQVFKGHL 843 >gi|302673648|ref|XP_003026510.1| hypothetical protein SCHCODRAFT_258840 [Schizophyllum commune H4-8] gi|300100193|gb|EFI91607.1| hypothetical protein SCHCODRAFT_258840 [Schizophyllum commune H4-8] Length = 1361 Score = 91.5 bits (226), Expect = 6e-17, Method: Composition-based stats. Identities = 36/226 (15%), Positives = 81/226 (35%), Gaps = 34/226 (15%) Query: 2 KQYHKFQR-ELYCDLQGENIEAFNSASKTVKCLQL---ANGAVYYDEEKHWKEVH----- 52 + Y + ++ ++ + +G+ + + +QL +DE + Sbjct: 739 QLYKQMKKYKMIANGKGKGQSTGGVKGLSNELMQLRKICQHPFLFDEVEDVVNTTQLIDE 798 Query: 53 -----DEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQK----------AFPQGRTLD 95 K++ L I+ K A +++ + + ++ G + Sbjct: 799 KIIRSSGKVELLSRILPKLFATDHRVLIFFQMTKVMDIMEDFLKMMGWKYLRLDGGTKTE 858 Query: 96 KDPCTIQEWNEGK--IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGV 153 + +Q +N I + + G GLNLQ + ++ F W+ Q Sbjct: 859 ERASYVQLFNAKDSDIRVFILSTRAGGLGLNLQT-ADTVIIFDSDWNPHADLQA-----Q 912 Query: 154 TRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 R + G +AV + I + +++E + QR R K I ++ A + Sbjct: 913 DRAHRIGQTKAVLILRFITEKSVEEAMYQRARYKLDIDGKVIQAGR 958 >gi|148886758|ref|NP_001092144.1| similar to SNF2/RAD54 family protein [Rattus norvegicus] gi|62667178|ref|XP_228546.3| PREDICTED: excision repair cross-complementing rodent repair deficiency complementation group 6 - like [Rattus norvegicus] gi|109512082|ref|XP_001070442.1| PREDICTED: excision repair cross-complementing rodent repair deficiency complementation group 6 - like [Rattus norvegicus] gi|149042163|gb|EDL95870.1| similar to SNF2/RAD54 family protein (predicted) [Rattus norvegicus] Length = 1230 Score = 91.5 bits (226), Expect = 6e-17, Method: Composition-based stats. Identities = 29/152 (19%), Positives = 53/152 (34%), Gaps = 20/152 (13%) Query: 53 DEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQKAFPQ--GRTLDKDPCTIQEW---- 104 K+ L ++E+ +V L +++ +TL D W Sbjct: 461 SGKMIFLMALLERLQDEGHQTLVFSQSRQILNIIERLLKNKHFKTLRIDGTVTHLWEREK 520 Query: 105 ------NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQ 158 + + G GL L + +V F W+ Q ++R+ + Sbjct: 521 RIQLFQQNKEYSVFLLTTQVGGVGLTLT-AASRVVIFDPSWNPATDAQAVDRV-----YR 574 Query: 159 AGFKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 G K V VY LI T++E + +R K ++ Sbjct: 575 IGQKENVVVYRLITCGTVEEKIYRRQVFKDSL 606 >gi|58267202|ref|XP_570757.1| DNA repair protein rad16 [Cryptococcus neoformans var. neoformans JEC21] gi|57226991|gb|AAW43450.1| DNA repair protein rad16, putative [Cryptococcus neoformans var. neoformans JEC21] Length = 1045 Score = 91.5 bits (226), Expect = 6e-17, Method: Composition-based stats. Identities = 34/162 (20%), Positives = 64/162 (39%), Gaps = 23/162 (14%) Query: 52 HDEKIKALEVIIEKANAA----PIIVAYHFNSDLARLQKAFPQGR----------TLDKD 97 K++AL +EK +V F S L + + T + Sbjct: 871 SSSKLEALVEELEKLRHKDCTIKSLVFSQFVSFLDLIAFRLQRAGFNICRLEGSMTPQQR 930 Query: 98 PCTIQEW--NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTR 155 TIQ + N G + + + G LNL +++ WW+ Q ++RI Sbjct: 931 DATIQHFMKNTG-VTVFLISLKAGGVALNLTE-ASMVFMMDSWWNPSVEYQAMDRI---- 984 Query: 156 QRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + G KR V V L+ +++I++ ++Q K + + L++ Sbjct: 985 -HRLGQKRPVKVVKLVIEDSIEDQIVQLQAKKLAMTEAALSS 1025 >gi|134111577|ref|XP_775325.1| hypothetical protein CNBE0430 [Cryptococcus neoformans var. neoformans B-3501A] gi|50257984|gb|EAL20678.1| hypothetical protein CNBE0430 [Cryptococcus neoformans var. neoformans B-3501A] Length = 1045 Score = 91.5 bits (226), Expect = 6e-17, Method: Composition-based stats. Identities = 34/162 (20%), Positives = 64/162 (39%), Gaps = 23/162 (14%) Query: 52 HDEKIKALEVIIEKANAA----PIIVAYHFNSDLARLQKAFPQGR----------TLDKD 97 K++AL +EK +V F S L + + T + Sbjct: 871 SSSKLEALVEELEKLRHKDCTIKSLVFSQFVSFLDLIAFRLQRAGFNICRLEGSMTPQQR 930 Query: 98 PCTIQEW--NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTR 155 TIQ + N G + + + G LNL +++ WW+ Q ++RI Sbjct: 931 DATIQHFMKNTG-VTVFLISLKAGGVALNLTE-ASMVFMMDSWWNPSVEYQAMDRI---- 984 Query: 156 QRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + G KR V V L+ +++I++ ++Q K + + L++ Sbjct: 985 -HRLGQKRPVKVVKLVIEDSIEDQIVQLQAKKLAMTEAALSS 1025 >gi|325191520|emb|CCA25894.1| PREDICTED: similar to SNF2 domaincontaining protein [Albugo laibachii Nc14] Length = 966 Score = 91.5 bits (226), Expect = 6e-17, Method: Composition-based stats. Identities = 30/161 (18%), Positives = 54/161 (33%), Gaps = 21/161 (13%) Query: 52 HDEKIKALEVIIEKANAA----PIIVAYHFNSDLARLQKAFPQGRT----------LDKD 97 KI+AL ++ IV F + L +Q G +D Sbjct: 793 TSTKIEALFQELDMMKTRDPSGKAIVFSQFVNMLDLIQFRLKLGGIPCVTLSGNMSMDAR 852 Query: 98 PCTIQEWNEG-KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 ++ + + L + G LNL +I + WW+ Q I+R Sbjct: 853 DRILESFRSDVNVTTLLISLKAGGVALNLTIASHIFLM-DPWWNPAAESQAIDR-----T 906 Query: 157 RQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + G + + + I +I++ +LQ K I D + Sbjct: 907 HRLGQFKPIQATHFIIAGSIEDRILQLQDKKRLIFDATVGG 947 >gi|297297256|ref|XP_002808499.1| PREDICTED: LOW QUALITY PROTEIN: chromodomain-helicase-DNA-binding protein 2-like [Macaca mulatta] Length = 1806 Score = 91.5 bits (226), Expect = 6e-17, Method: Composition-based stats. Identities = 25/161 (15%), Positives = 59/161 (36%), Gaps = 20/161 (12%) Query: 52 HDEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQKAF---------PQGRTLDK-DPC 99 K+ L+ ++ + +++ L L + G + Sbjct: 767 SSGKLILLDKLLTRLRERGNRVLIFSQMVRMLDILAEYLTIKHYPFQRLDGSIKGEIRKQ 826 Query: 100 TIQEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 + +N + + G G+NL + +V F W+ + Q R Sbjct: 827 ALDHFNADGSEDFCFLLSTRAGGLGINL-ASADTVVIFDSDWNPQNDLQAQAR-----AH 880 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNAL 198 + G K+ V +Y L+ + T++E +++R + K + L++ + Sbjct: 881 RIGQKKQVNIYRLVTKGTVEEEIIERAKKKMVLDHLVIQRM 921 >gi|221125834|ref|XP_002164775.1| PREDICTED: similar to TBP-associated factor 170, partial [Hydra magnipapillata] Length = 460 Score = 91.5 bits (226), Expect = 6e-17, Method: Composition-based stats. Identities = 28/141 (19%), Positives = 57/141 (40%), Gaps = 20/141 (14%) Query: 69 APIIVAYHFNSDLARLQK-------------AFPQGRTLDKDPCTIQEWNE-GKIPLLFA 114 ++ + S L ++ ++ +Q +N I +L Sbjct: 253 HRALIFFQLKSMLNIVENDLFKQHLPSITYLRLDGSVPANQRHNIVQMFNNDPSIDVLLL 312 Query: 115 HPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQN 174 G GLNL G + ++F W+ + Q ++R + G K+ V VY LIA++ Sbjct: 313 TTHVGGLGLNLT-GADTVIFVEHDWNPMKDLQAMDR-----AHRIGQKKVVNVYRLIARS 366 Query: 175 TIDELVLQRLRTKSTIQDLLL 195 T++E ++ + K I + ++ Sbjct: 367 TLEEKIMGLQKFKLNIANTVI 387 >gi|26324980|dbj|BAC26244.1| unnamed protein product [Mus musculus] Length = 1240 Score = 91.5 bits (226), Expect = 6e-17, Method: Composition-based stats. Identities = 29/152 (19%), Positives = 52/152 (34%), Gaps = 20/152 (13%) Query: 53 DEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQKAFPQ--GRTLDKDPCTIQEW---- 104 K+ L ++E+ +V L +++ +TL D W Sbjct: 462 SGKMIFLMSLLERLQDEGHQTLVFSQSIKILNIIERLLKNKHFKTLRIDGTVTHLWEREK 521 Query: 105 ------NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQ 158 + + G GL L +V F W+ Q ++R+ + Sbjct: 522 RIQLFQQNKEYSVFLLTTQVGGVGLTLT-AATRVVIFDPSWNPATDAQAVDRV-----YR 575 Query: 159 AGFKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 G K V VY LI T++E + +R K ++ Sbjct: 576 IGQKENVVVYRLITCGTVEEKIYRRQVFKDSL 607 >gi|219128189|ref|XP_002184301.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1] gi|217404102|gb|EEC44050.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1] Length = 975 Score = 91.5 bits (226), Expect = 6e-17, Method: Composition-based stats. Identities = 34/156 (21%), Positives = 61/156 (39%), Gaps = 20/156 (12%) Query: 59 LEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLD-----------KDPCTIQEWNEG 107 L+ I E A I+V ++ S L ++ R L + ++ +N Sbjct: 688 LQSIRENAPNDKIVVVSNYTSALTIVESLILGPRKLGFLRLDGGTESSQRQPLVESFNRS 747 Query: 108 ---KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA 164 K+ L + G GLNL G N L+ W+ Q + R+ + G + Sbjct: 748 HPEKVFCLLLSSKAGGCGLNL-VGANRLLLLDPDWNPASDVQAMGRV-----YRQGQTKP 801 Query: 165 VFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKK 200 ++Y L T++E++LQR K + ++ K Sbjct: 802 CWIYRLFTTGTVEEVILQRQLQKGNLTAWTVDGGKS 837 >gi|148706991|gb|EDL38938.1| chromodomain helicase DNA binding protein 1-like [Mus musculus] Length = 900 Score = 91.5 bits (226), Expect = 6e-17, Method: Composition-based stats. Identities = 33/216 (15%), Positives = 78/216 (36%), Gaps = 33/216 (15%) Query: 1 MKQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYD-------EEKHWKEVHD 53 MK F+ E + ++ N ++ KC + +D E Sbjct: 289 MKDLDAFENET-----AKKVKLQNILTQLRKC---VDHPYLFDGVEPEPFEVGEHLIEAS 340 Query: 54 EKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAFP---------QGRTLDKDPC-TI 101 K+ L+ ++ + +++ L LQ G ++ I Sbjct: 341 GKLHLLDRLLAFLYSGGHRVLLFSQMTHMLDILQDYMDYRGYSYERVDGSVRGEERHLAI 400 Query: 102 QEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGF 161 + + I + + G G+NL + ++F ++ + Q R + G Sbjct: 401 KNFGNQPIFVFLLSTRAGGVGMNLT-AADTVIFVDSDFNPQNDLQAAAR-----AHRIGQ 454 Query: 162 KRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 ++V V LI ++T++E+V ++ +K + ++++ Sbjct: 455 NKSVKVIRLIGRDTVEEIVYRKAASKLQLTNMVIEG 490 >gi|149240541|ref|XP_001526146.1| chromatin remodelling complex ATPase chain ISW1 [Lodderomyces elongisporus NRRL YB-4239] gi|146450269|gb|EDK44525.1| chromatin remodelling complex ATPase chain ISW1 [Lodderomyces elongisporus NRRL YB-4239] Length = 1088 Score = 91.5 bits (226), Expect = 6e-17, Method: Composition-based stats. Identities = 43/224 (19%), Positives = 82/224 (36%), Gaps = 39/224 (17%) Query: 6 KFQRELYCDLQGENIEAFNSAS--------KTVKCLQL---ANGAVYYD--EEKHWKEVH 52 Q E Y L ++I+A N +QL N +D E Sbjct: 406 DMQLEWYKKLLEKDIDAVNGVVGKREGKTRLLNIVMQLRKCCNHPYLFDGAEPGPPYTTD 465 Query: 53 DEKIK------ALEVIIE--KANAAPIIVAYHFNSDLARLQ---------KAFPQGRTLD 95 + I L+ +++ + + +++ + L L+ G T Sbjct: 466 EHLIDNSGKMIILDKMLKKFQKEGSRVLIFSQMSRVLDILEDYCYFRDYEYCRIDGSTSH 525 Query: 96 KDP-CTIQEWNEGK--IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIG 152 +D I E+N + + G G+NL +I++ + W+ + Q ++R Sbjct: 526 EDRIEAIDEYNAPDSAKFVFLLTTRAGGLGINLT-SADIVILYDSDWNPQADLQAMDR-- 582 Query: 153 VTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + G K+ V VY + +N I+E VL+R K + L++ Sbjct: 583 ---AHRIGQKKQVKVYRFVTENAIEEKVLERAAQKLRLDQLVIQ 623 >gi|27414501|ref|NP_666347.2| DNA excision repair protein ERCC-6-like [Mus musculus] gi|81873794|sp|Q8BHK9|ERC6L_MOUSE RecName: Full=DNA excision repair protein ERCC-6-like; AltName: Full=ATP-dependent helicase ERCC6-like gi|22902399|gb|AAH37660.1| Excision repair cross-complementing rodent repair deficiency complementation group 6 - like [Mus musculus] gi|27368137|gb|AAN87172.1| excision repair cross-complementing rodent repair deficiency complementation group 6 C-like [Mus musculus] gi|123229764|emb|CAM24634.1| excision repair cross-complementing rodent repair deficiency complementation group 6-like [Mus musculus] Length = 1240 Score = 91.5 bits (226), Expect = 6e-17, Method: Composition-based stats. Identities = 29/152 (19%), Positives = 52/152 (34%), Gaps = 20/152 (13%) Query: 53 DEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQKAFPQ--GRTLDKDPCTIQEW---- 104 K+ L ++E+ +V L +++ +TL D W Sbjct: 462 SGKMIFLMSLLERLQDEGHQTLVFSQSIKILNIIERLLKNKHFKTLRIDGTVTHLWEREK 521 Query: 105 ------NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQ 158 + + G GL L +V F W+ Q ++R+ + Sbjct: 522 RIQLFQQNKEYSVFLLTTQVGGVGLTLT-AATRVVIFDPSWNPATDAQAVDRV-----YR 575 Query: 159 AGFKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 G K V VY LI T++E + +R K ++ Sbjct: 576 IGQKENVVVYRLITCGTVEEKIYRRQVFKDSL 607 >gi|291001481|ref|XP_002683307.1| chromodomain helicase DNA binding protein [Naegleria gruberi] gi|284096936|gb|EFC50563.1| chromodomain helicase DNA binding protein [Naegleria gruberi] Length = 1800 Score = 91.5 bits (226), Expect = 6e-17, Method: Composition-based stats. Identities = 23/145 (15%), Positives = 53/145 (36%), Gaps = 18/145 (12%) Query: 65 KANAAPIIVAYHFNSDLARLQ-----KAFPQGRTLDK-----DPCTIQEWNEGKIP--LL 112 + +++ L L+ + F R I +N+ I + Sbjct: 690 REGGHKVLIFSQMVLVLNILEDYMRYRNFTYVRLDGTIKGSIRQQAIDRFNDPNIDTFVF 749 Query: 113 FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIA 172 + G G+NL + ++ + W+ + Q R + G + V +Y L+ Sbjct: 750 LVSTKAGGVGINLT-SADTVIIYDSDWNPQNDLQAQARC-----HRIGQTKEVKIYRLLT 803 Query: 173 QNTIDELVLQRLRTKSTIQDLLLNA 197 +NT ++ + +R K + +L++ Sbjct: 804 KNTKEKEIFERASMKLGLDRAVLSS 828 >gi|254572850|ref|XP_002493534.1| Member of the imitation-switch (ISWI) class of ATP-dependent chromatin remodeling complexes [Pichia pastoris GS115] gi|238033333|emb|CAY71355.1| Member of the imitation-switch (ISWI) class of ATP-dependent chromatin remodeling complexes [Pichia pastoris GS115] Length = 983 Score = 91.5 bits (226), Expect = 6e-17, Method: Composition-based stats. Identities = 32/163 (19%), Positives = 68/163 (41%), Gaps = 20/163 (12%) Query: 52 HDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQ---------KAFPQGRTLDKDP-C 99 + K+ L+ +++K + +++ + L L+ G T +D Sbjct: 400 NSAKMIVLDKLLKKMKEQGSRVLIFSQMSRLLDILEDYCFFREYEYCRIDGSTAHEDRIN 459 Query: 100 TIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 I E+N+ + + G G+NL +I+V + W+ + Q ++R Sbjct: 460 AIDEYNKPDSKKFIFLLTTRAGGLGINLT-SADIVVLYDSDWNPQADLQAMDR-----AH 513 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKK 200 + G K+ V V+ + +N I+E VL+R K + L++ + Sbjct: 514 RIGQKKQVQVFRFVTENAIEEKVLERAAQKLRLDQLVIQQGRA 556 >gi|50306047|ref|XP_452985.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140] gi|49642118|emb|CAH01836.1| KLLA0C17578p [Kluyveromyces lactis] Length = 1525 Score = 91.5 bits (226), Expect = 6e-17, Method: Composition-based stats. Identities = 26/159 (16%), Positives = 61/159 (38%), Gaps = 20/159 (12%) Query: 52 HDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARL----------QKAFPQGRTLDKDPC 99 K+ L+ ++ + + +++ L L + + Sbjct: 705 SSGKMVLLDKLLTRLKKDGHRVLIFSQMVRILDILGDYLSIKGINFQRLDGTVPSAQRRI 764 Query: 100 TIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 +I +N + + G G+NL + ++ F W+ + Q + R Sbjct: 765 SIDHFNAEDSNDFVFLLSTRAGGLGINLMT-ADTVIIFDSDWNPQADLQAMAR-----AH 818 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + G K V VY ++++T++E VL+R R K ++ +++ Sbjct: 819 RIGQKNHVMVYRFVSKDTVEEEVLERARKKMILEYAIIS 857 >gi|83764679|dbj|BAE54823.1| unnamed protein product [Aspergillus oryzae] Length = 1894 Score = 91.5 bits (226), Expect = 6e-17, Method: Composition-based stats. Identities = 32/163 (19%), Positives = 63/163 (38%), Gaps = 18/163 (11%) Query: 35 LANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTL 94 L GA Y + ++K + I++ ++ + + Sbjct: 1665 LGTGASYVSPHRALIF---CQMKEMLDIVQSEVLKKLLPSVQYL--------RLDGSVEA 1713 Query: 95 DKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGV 153 K + +N + L + G GLNL G + ++F W+ ++ Q ++R Sbjct: 1714 TKRQDIVNRFNTDPSYDALLLTTSVGGLGLNLT-GADTVIFVEHDWNPQKDIQAMDR--- 1769 Query: 154 TRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + G K+ V VY LI + T++E +L R K + ++N Sbjct: 1770 --AHRIGQKKVVNVYRLITRGTLEEKILNLQRFKIDVASTVVN 1810 >gi|291244998|ref|XP_002742381.1| PREDICTED: SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1-like [Saccoglossus kowalevskii] Length = 1082 Score = 91.5 bits (226), Expect = 6e-17, Method: Composition-based stats. Identities = 28/157 (17%), Positives = 63/157 (40%), Gaps = 19/157 (12%) Query: 51 VHDEKIKALEVIIEKAN--AAPIIVAYHFNSDLARL---------QKAFPQGRT-LDKDP 98 ++ K L+ ++ + +++ F L + + G+T + + Sbjct: 909 LNSGKFYKLDSLLPEMKQRGDRVLLFSQFTMMLDIIEVYMQYHKHKYLRLDGQTPVQERL 968 Query: 99 CTIQEWNEGK-IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 I ++N I + + G G+NL N+++ + ++ +Q +R Sbjct: 969 QLIDKYNNDNGIFVFLLSTKAGGLGINLT-SANVVIIHDIDFNPYNDKQAEDRC-----H 1022 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 + G R V V LI +NTI+E +L+ K ++ + Sbjct: 1023 RVGQTRDVTVIRLICENTIEEAMLKCAMGKLKLEADI 1059 >gi|323303978|gb|EGA57758.1| Rad5p [Saccharomyces cerevisiae FostersB] Length = 1169 Score = 91.5 bits (226), Expect = 6e-17, Method: Composition-based stats. Identities = 33/171 (19%), Positives = 64/171 (37%), Gaps = 25/171 (14%) Query: 41 YYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQK-------------- 86 Y K K K L+++ + + +++ F++ L L+K Sbjct: 987 YSPASKSSKITALXKE--LQLLQDSSAGEQVVIFSQFSTYLDILEKELTHTFSKDVAKIY 1044 Query: 87 AFPQGRTLDKDPCTIQEWNEGK---IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEE 143 F +L + + ++ +L + G GLNL + + WW Sbjct: 1045 KFDGRLSLKERTSVLADFAVKDYSRQKILLLSLKAGGVGLNLTCASHAYMM-DPWWSPSM 1103 Query: 144 HQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 Q I+R+ + G +V V I Q++I+E +L+ K TI + + Sbjct: 1104 EDQAIDRL-----HRIGQTNSVKVMRFIIQDSIEEKMLRIQEKKRTIGEAM 1149 >gi|225559059|gb|EEH07342.1| SHREC complex subunit Mit1 [Ajellomyces capsulatus G186AR] Length = 1530 Score = 91.5 bits (226), Expect = 6e-17, Method: Composition-based stats. Identities = 27/159 (16%), Positives = 61/159 (38%), Gaps = 20/159 (12%) Query: 52 HDEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQKAFPQGRTLDKD----------PC 99 K++ LE+++ K +++ F +L ++ L + Sbjct: 984 ASSKLQLLEMLLPKLQERGHRVLIFSQFLDNLDVMEDFLDGLGLLHRRLDGSMTSLQKQK 1043 Query: 100 TIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 I E+N P S G G+NL + +V ++ + Q + R Sbjct: 1044 QIDEFNVPGSPYFAFLLSTRSGGVGINL-ATADTVVIMDPDFNPHQDIQALSR-----AH 1097 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + G ++ V V+ L+ + + +E ++Q + K + +L+ Sbjct: 1098 RIGQRKKVLVFQLVTKGSAEEKIMQMGKKKMALDQVLIE 1136 >gi|317138849|ref|XP_001816825.2| TBP associated factor (Mot1) [Aspergillus oryzae RIB40] Length = 1900 Score = 91.5 bits (226), Expect = 6e-17, Method: Composition-based stats. Identities = 32/163 (19%), Positives = 63/163 (38%), Gaps = 18/163 (11%) Query: 35 LANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTL 94 L GA Y + ++K + I++ ++ + + Sbjct: 1671 LGTGASYVSPHRALIF---CQMKEMLDIVQSEVLKKLLPSVQYL--------RLDGSVEA 1719 Query: 95 DKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGV 153 K + +N + L + G GLNL G + ++F W+ ++ Q ++R Sbjct: 1720 TKRQDIVNRFNTDPSYDALLLTTSVGGLGLNLT-GADTVIFVEHDWNPQKDIQAMDR--- 1775 Query: 154 TRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + G K+ V VY LI + T++E +L R K + ++N Sbjct: 1776 --AHRIGQKKVVNVYRLITRGTLEEKILNLQRFKIDVASTVVN 1816 >gi|254569936|ref|XP_002492078.1| ATPase component of the RSC chromatin remodeling complex [Pichia pastoris GS115] gi|238031875|emb|CAY69798.1| ATPase component of the RSC chromatin remodeling complex [Pichia pastoris GS115] gi|328351432|emb|CCA37831.1| ATP-dependent helicase STH1/SNF2 [Pichia pastoris CBS 7435] Length = 1239 Score = 91.5 bits (226), Expect = 6e-17, Method: Composition-based stats. Identities = 37/228 (16%), Positives = 78/228 (34%), Gaps = 36/228 (15%) Query: 2 KQYHKFQRELYCDLQGEN---IEAFNSASKTVKCLQL---ANGAVYYDEEKHWKE----- 50 Y + + + + + K +QL N +DE ++ + Sbjct: 718 ALYQQMLKHNALFIGASSGPGVSKSGIKGLNNKIMQLRKICNHPFVFDEVENVVDPTRST 777 Query: 51 -----VHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLA---------RLQKAFPQGRTL 94 K + L+ ++ K A +++ + + ++ G T Sbjct: 778 ADLIWRTSAKFELLDRVLPKFCATGHRVLIFFQMTQVMDIMEDYLRYREMKYLRLDGSTN 837 Query: 95 DKDPCT-IQEWNEGKIPLL--FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERI 151 D ++ +N + G GLNLQ + ++ F W+ + Q Sbjct: 838 ADDRQDMLKAFNAPDSEYFCFLLSTRAGGLGLNLQT-ADTVIIFDTDWNPHQDLQA---- 892 Query: 152 GVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 R + G K V + LI ++++E++L+R K I ++ A K Sbjct: 893 -QDRAHRIGQKNEVRILRLITTDSVEEVILERAHQKLDIDGKVIQAGK 939 >gi|328354642|emb|CCA41039.1| SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5 [Pichia pastoris CBS 7435] Length = 1012 Score = 91.5 bits (226), Expect = 6e-17, Method: Composition-based stats. Identities = 32/163 (19%), Positives = 68/163 (41%), Gaps = 20/163 (12%) Query: 52 HDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQ---------KAFPQGRTLDKDP-C 99 + K+ L+ +++K + +++ + L L+ G T +D Sbjct: 429 NSAKMIVLDKLLKKMKEQGSRVLIFSQMSRLLDILEDYCFFREYEYCRIDGSTAHEDRIN 488 Query: 100 TIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 I E+N+ + + G G+NL +I+V + W+ + Q ++R Sbjct: 489 AIDEYNKPDSKKFIFLLTTRAGGLGINLT-SADIVVLYDSDWNPQADLQAMDR-----AH 542 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKK 200 + G K+ V V+ + +N I+E VL+R K + L++ + Sbjct: 543 RIGQKKQVQVFRFVTENAIEEKVLERAAQKLRLDQLVIQQGRA 585 >gi|302842935|ref|XP_002953010.1| hypothetical protein VOLCADRAFT_30242 [Volvox carteri f. nagariensis] gi|300261721|gb|EFJ45932.1| hypothetical protein VOLCADRAFT_30242 [Volvox carteri f. nagariensis] Length = 791 Score = 91.5 bits (226), Expect = 6e-17, Method: Composition-based stats. Identities = 30/161 (18%), Positives = 62/161 (38%), Gaps = 22/161 (13%) Query: 50 EVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQKAFPQGRTLD-----------K 96 H K++ ++ + + +I+ F L L++ + GR L + Sbjct: 603 VTHSGKLQLVDKMAMRLRDAGHRLIIFSQFTRTLDLLEE-WLVGRGLGYMRIDGTVAGSE 661 Query: 97 DPCTIQEWNE--GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 I +N+ + G G+NL + ++ F W+ Q R Sbjct: 662 RQKRIDRFNQHPDSYFCFLLSTRAGGLGINL-ATADTVIIFDSDWNPHNDLQAQAR---- 716 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 + G + V +Y L+ + TI+E ++Q R K ++ L++ Sbjct: 717 -AHRLGQDKPVMIYRLVTRQTIEERMMQVSRKKMMLEHLVV 756 >gi|213410130|ref|XP_002175835.1| SNF2 family ATP-dependent chromatin-remodeling factor snf21 [Schizosaccharomyces japonicus yFS275] gi|212003882|gb|EEB09542.1| SNF2 family ATP-dependent chromatin-remodeling factor snf21 [Schizosaccharomyces japonicus yFS275] Length = 1162 Score = 91.5 bits (226), Expect = 6e-17, Method: Composition-based stats. Identities = 33/226 (14%), Positives = 77/226 (34%), Gaps = 33/226 (14%) Query: 1 MKQYHKFQRELYCDLQGENIEAFNSASKTVKCLQL---ANGAVYYDEEKHWKEVHDEKIK 57 +K Y + ++ +Q +QL N ++E + + Sbjct: 583 LKLYTQMKKHGMLFVQNGTNGKTGIKGLQNTVMQLKKICNHPFVFEEVEKVVDPSGMSFD 642 Query: 58 ALE------VIIEKA------NAAPIIVAYHFNSDLARL---------QKAFPQGRTL-D 95 L ++++ + +++ + + + + G T D Sbjct: 643 MLWRVAGKFELLDRILPKLFKSGHRVLMFFQMTQIMNIMEDYLHYRAWKYLRLDGSTKSD 702 Query: 96 KDPCTIQEWNEGK--IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGV 153 + +N+ + + G GLNLQ + ++ F W+ + Q Sbjct: 703 DRSQLLHLFNDPASIYTIFLLSTRAGGLGLNLQT-ADTVIIFDSDWNPHQDLQA-----Q 756 Query: 154 TRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 R + G + V ++ LI + +++E +L R + K I ++ A K Sbjct: 757 DRAHRIGQTKEVRIFRLITEKSVEENILARAQYKLDIDGKVIQAGK 802 >gi|320162753|gb|EFW39652.1| conserved hypothetical protein [Capsaspora owczarzaki ATCC 30864] Length = 1169 Score = 91.5 bits (226), Expect = 6e-17, Method: Composition-based stats. Identities = 28/142 (19%), Positives = 58/142 (40%), Gaps = 20/142 (14%) Query: 70 PIIVAYHFNSDLARLQ----------KAFPQGRTLDKDPCTIQEWN--EGKIPLLFAHPA 117 I+V + S L L+ F ++ + I+E+ + ++ Sbjct: 1009 KILVFSQWTSMLDLLEPALQEAHIFFSRFDGSMSMREKDNVIREFGHLRSQTRVMLCSLK 1068 Query: 118 SCGHGLNLQYGGNILV---FFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQN 174 GLNL + + + + WW+ + +Q I+R+ + G R V V L+ + Sbjct: 1069 CTSMGLNLTMASRVFIVGTWTAPWWNPMQEEQAIDRV-----HRIGQMREVIVERLVIPD 1123 Query: 175 TIDELVLQRLRTKSTIQDLLLN 196 T++E VL + K + + +L+ Sbjct: 1124 TVEERVLLLQQNKQMLANAVLD 1145 >gi|13386044|ref|NP_080815.1| chromodomain-helicase-DNA-binding protein 1-like [Mus musculus] gi|81916841|sp|Q9CXF7|CHD1L_MOUSE RecName: Full=Chromodomain-helicase-DNA-binding protein 1-like gi|12852350|dbj|BAB29376.1| unnamed protein product [Mus musculus] gi|30931375|gb|AAH52385.1| Chromodomain helicase DNA binding protein 1-like [Mus musculus] Length = 900 Score = 91.5 bits (226), Expect = 6e-17, Method: Composition-based stats. Identities = 33/216 (15%), Positives = 78/216 (36%), Gaps = 33/216 (15%) Query: 1 MKQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYD-------EEKHWKEVHD 53 MK F+ E + ++ N ++ KC + +D E Sbjct: 289 MKDLDAFENET-----AKKVKLQNILTQLRKC---VDHPYLFDGVEPEPFEVGEHLIEAS 340 Query: 54 EKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAFP---------QGRTLDKDPC-TI 101 K+ L+ ++ + +++ L LQ G ++ I Sbjct: 341 GKLHLLDRLLAFLYSGGHRVLLFSQMTHMLDILQDYMDYRGYSYERVDGSVRGEERHLAI 400 Query: 102 QEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGF 161 + + I + + G G+NL + ++F ++ + Q R + G Sbjct: 401 KNFGNQPIFVFLLSTRAGGVGMNLT-AADTVIFVDSDFNPQNDLQAAAR-----AHRIGQ 454 Query: 162 KRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 ++V V LI ++T++E+V ++ +K + ++++ Sbjct: 455 NKSVKVIRLIGRDTVEEIVYRKAASKLQLTNMVIEG 490 >gi|302415028|ref|XP_003005346.1| helicase SWR1 [Verticillium albo-atrum VaMs.102] gi|261356415|gb|EEY18843.1| helicase SWR1 [Verticillium albo-atrum VaMs.102] Length = 969 Score = 91.5 bits (226), Expect = 6e-17, Method: Composition-based stats. Identities = 35/169 (20%), Positives = 66/169 (39%), Gaps = 21/169 (12%) Query: 44 EEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTL------- 94 E W E K+ + +I + AN ++V F + L++ Sbjct: 784 PEGSWME--SGKVTKMLELIHQYQANGDRVLVFSKFAKVIEILREVLHTDGIKHCVLYGA 841 Query: 95 ---DKDPCTIQEWNEG-KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 ++ I E+NE IP+ + G G+NL N ++ F + ++ Q Sbjct: 842 TSVEERQGLINEFNENTDIPVFLLTTGAGGTGINLT-SANKVIIFDQSDNPQDDIQA--- 897 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 R + G R V V L+ + TI+EL+ + K + + + A++ Sbjct: 898 --ENRAHRLGQTRDVEVIRLLTRRTIEELIFKACEKKIELANKVTGAVE 944 >gi|294659540|ref|XP_002770598.1| DEHA2G08800p [Debaryomyces hansenii CBS767] gi|199434043|emb|CAR65933.1| DEHA2G08800p [Debaryomyces hansenii] Length = 1225 Score = 91.5 bits (226), Expect = 6e-17, Method: Composition-based stats. Identities = 31/172 (18%), Positives = 64/172 (37%), Gaps = 23/172 (13%) Query: 40 VYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFP---------- 89 +Y + I L+++ E++ ++V F+S L ++ Sbjct: 1038 LYLYDPTKTSSKIQCLINHLKILKEQSPNEQVVVFSQFSSYLDIIENELKIQISNDFVVY 1097 Query: 90 --QGRT-LDKDPCTIQEW----NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLE 142 GR +++ ++ + +E K+ +L + G GLNL + WW Sbjct: 1098 KFDGRLNMNERQKILENFSSQKHENKVMILLLSLKAGGVGLNLTT-ASRAFMMDPWWSPS 1156 Query: 143 EHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 Q I+R+ + G V V I ++I+ +L+ K I + + Sbjct: 1157 VEDQAIDRL-----HRIGQNSNVKVTRFIMADSIETKMLKIQERKKQIGEAV 1203 >gi|70946126|ref|XP_742810.1| ATP-dependant helicase [Plasmodium chabaudi chabaudi] gi|56521995|emb|CAH89085.1| ATP-dependant helicase, putative [Plasmodium chabaudi chabaudi] Length = 631 Score = 91.5 bits (226), Expect = 6e-17, Method: Composition-based stats. Identities = 26/163 (15%), Positives = 64/163 (39%), Gaps = 19/163 (11%) Query: 47 HWKEVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQK----------AFPQGRTL 94 + K+ ALE ++ K ++ F L L+ + Sbjct: 254 KDISLGSGKLFALEKLLSKCKREGNKCLLFTQFIKMLDILEIFLNHLNYSFIRLDGSTKV 313 Query: 95 DKDPCTIQEWNEGK-IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGV 153 ++ + ++N K + + S G+NL N+++F+ W+ +Q ++R Sbjct: 314 EQRQKIVTKFNNDKSYFIFISSTRSGSIGINLT-AANVVIFYDTDWNPSIDKQAMDRC-- 370 Query: 154 TRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + G + V V+ + + T++E + ++ K + ++ +N Sbjct: 371 ---HRIGQTKDVHVFRFVCEYTVEENIWKKQLQKRKLDNICIN 410 >gi|296417472|ref|XP_002838381.1| hypothetical protein [Tuber melanosporum Mel28] gi|295634311|emb|CAZ82572.1| unnamed protein product [Tuber melanosporum] Length = 1069 Score = 91.5 bits (226), Expect = 6e-17, Method: Composition-based stats. Identities = 34/178 (19%), Positives = 74/178 (41%), Gaps = 22/178 (12%) Query: 38 GAVYYDEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQ---------K 86 G Y +E + K+ L+ ++++ A + +++ + L L+ Sbjct: 410 GPPYTTDEHII--DNSGKMVMLDKLLKRMKAQKSRVLIFSQMSRQLDILEDYCVFREYPY 467 Query: 87 AFPQGRTLDKDP-CTIQEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEE 143 G T +D I E+N+ + + + G G+NL +I+V + W+ + Sbjct: 468 CRIDGSTAHEDRITAIDEYNKPGSEKFIFLLTTRAGGLGINLTT-ADIVVLYDSDWNPQA 526 Query: 144 HQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 Q ++R + G + V V+ + +N I+E VL+R K + L++ + + Sbjct: 527 DLQAMDR-----AHRIGQTKQVMVFRFVTENAIEEKVLERAAQKLRLDQLVIQQGRSQ 579 >gi|171677949|ref|XP_001903925.1| hypothetical protein [Podospora anserina S mat+] gi|170937043|emb|CAP61702.1| unnamed protein product [Podospora anserina S mat+] Length = 1057 Score = 91.5 bits (226), Expect = 6e-17, Method: Composition-based stats. Identities = 40/226 (17%), Positives = 84/226 (37%), Gaps = 43/226 (19%) Query: 6 KFQRELYCDLQGENIEAFNSAS--------KTVKCLQLAN-------------GAVYYDE 44 + Q + Y + ++I+A N A +QL G Y + Sbjct: 391 EMQVKWYKRILEKDIDAVNGAGGKRESKTRLLNIVMQLRKCCNHPYLFEGAEPGPPYTTD 450 Query: 45 EKHWKEVHDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQK----------AFPQGR 92 E + K+ L+ +++ +A + +++ + L L+ G Sbjct: 451 EHLV--FNSGKMIILDKLLKRMQAQDSRVLIFSQMSRLLDILEDYCVFRGYKYCRIDGGT 508 Query: 93 TLDKDPCTIQEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 + I E+N+ + + + G G+NL +I++ + W+ + Q ++R Sbjct: 509 AHEDRIAAIDEYNKPGSEKFIFLLTTRAGGLGINLTT-ADIVILYDSDWNPQADLQAMDR 567 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + G + V VY + N I+E VL+R K + L++ Sbjct: 568 -----AHRIGQTKQVVVYRFVTDNAIEEKVLERAAQKLRLDQLVIQ 608 >gi|4584529|emb|CAB40760.1| putative protein [Arabidopsis thaliana] gi|7270094|emb|CAB79908.1| putative protein [Arabidopsis thaliana] Length = 1067 Score = 91.5 bits (226), Expect = 6e-17, Method: Composition-based stats. Identities = 30/191 (15%), Positives = 70/191 (36%), Gaps = 30/191 (15%) Query: 29 TVKCLQLANGAVYYDEEKHWKEVHDE----------KIKALEVIIEKA--NAAPIIVAYH 76 +K Q+ + + + E +E K++ L+ ++ K +++ Sbjct: 379 LMKLRQVCSHPYLLPDFEPRFEDANEAFTKLLEASGKLQLLDKMMVKLKEQGHRVLIYTQ 438 Query: 77 FNSDLARLQKAF---------PQGRTLDKDPCT-IQEWN--EGKIPLLFAHPASCGHGLN 124 F L L+ F G+ + I +N + G G+N Sbjct: 439 FQHTLYLLEDYFTFKNWNYERIDGKISGPERQVRIDRFNAENSNRFCFLLSTRAGGIGIN 498 Query: 125 LQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRL 184 L + ++ + W+ Q + R+ + G V +Y LI + T++E +++ Sbjct: 499 L-ATADTVIIYDSDWNPHADLQAMARV-----HRLGQTNKVMIYRLIHKGTVEERMMEIT 552 Query: 185 RTKSTIQDLLL 195 + K ++ L++ Sbjct: 553 KNKMLLEHLVV 563 >gi|325088120|gb|EGC41430.1| chromodomain helicase [Ajellomyces capsulatus H88] Length = 1530 Score = 91.5 bits (226), Expect = 6e-17, Method: Composition-based stats. Identities = 27/159 (16%), Positives = 61/159 (38%), Gaps = 20/159 (12%) Query: 52 HDEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQKAFPQGRTLDKD----------PC 99 K++ LE+++ K +++ F +L ++ L + Sbjct: 984 ASSKLQLLEMLLPKLQERGHRVLIFSQFLDNLDVMEDFLDGLGLLHRRLDGSMTSLQKQK 1043 Query: 100 TIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 I E+N P S G G+NL + +V ++ + Q + R Sbjct: 1044 QIDEFNVPGSPYFAFLLSTRSGGVGINL-ATADTVVIMDPDFNPHQDIQALSR-----AH 1097 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + G ++ V V+ L+ + + +E ++Q + K + +L+ Sbjct: 1098 RIGQRKKVLVFQLVTKGSAEEKIMQMGKKKMALDQVLIE 1136 >gi|58331268|ref|NP_060139.2| DNA excision repair protein ERCC-6-like [Homo sapiens] gi|121948339|sp|Q2NKX8|ERC6L_HUMAN RecName: Full=DNA excision repair protein ERCC-6-like; AltName: Full=ATP-dependent helicase ERCC6-like; AltName: Full=PLK1-interacting checkpoint helicase; AltName: Full=Tumor antigen BJ-HCC-15 gi|84798788|gb|AAI11487.1| Excision repair cross-complementing rodent repair deficiency, complementation group 6-like [Homo sapiens] gi|155675838|gb|ABU25227.1| Plk1-interacting checkpoint helicase [Homo sapiens] Length = 1250 Score = 91.5 bits (226), Expect = 6e-17, Method: Composition-based stats. Identities = 27/152 (17%), Positives = 52/152 (34%), Gaps = 20/152 (13%) Query: 53 DEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQK-----AFPQGRT-------LDKDP 98 K+ L ++++ +V L +++ F R L+++ Sbjct: 459 SGKMIFLMDLLKRLRDEGHQTLVFSQSRQILNIIERLLKNRHFKTLRIDGTVTHLLEREK 518 Query: 99 CTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQ 158 + G GL L +V F W+ Q ++R+ + Sbjct: 519 RINLFQQNKDYSVFLLTTQVGGVGLTLT-AATRVVIFDPSWNPATDAQAVDRV-----YR 572 Query: 159 AGFKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 G K V VY LI T++E + +R K ++ Sbjct: 573 IGQKENVVVYRLITCGTVEEKIYRRQVFKDSL 604 >gi|228213|prf||1718318A GAM1 gene Length = 1703 Score = 91.5 bits (226), Expect = 6e-17, Method: Composition-based stats. Identities = 32/159 (20%), Positives = 62/159 (38%), Gaps = 20/159 (12%) Query: 55 KIKALEVIIEK--ANAAPIIVAYHFNSDLAR---------LQKAFPQGRTL-DKDPCTIQ 102 K + L+ I+ K A +++ + + ++ G T D+ ++ Sbjct: 1088 KFELLDRILPKLKATGHRVLIFFQMTQIMDIMEDFLRYINIKYLRLDGHTKSDERSELLR 1147 Query: 103 EWNEGKIPL--LFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 +N + G GLNLQ + ++ F W+ + Q R + G Sbjct: 1148 LFNAPDSEYLCFILSTRAGGLGLNLQT-ADTVIIFDTDWNPHQDLQA-----QDRAHRIG 1201 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 K V + LI N+++E++L+R K I ++ A K Sbjct: 1202 QKNEVRILRLITTNSVEEVILERAYKKLDIDGKVIQAGK 1240 >gi|6324864|ref|NP_014933.1| Snf2p [Saccharomyces cerevisiae S288c] gi|134589|sp|P22082|SNF2_YEAST RecName: Full=Transcription regulatory protein SNF2; AltName: Full=ATP-dependent helicase SNF2; AltName: Full=Regulatory protein GAM1; AltName: Full=Regulatory protein SWI2; AltName: Full=SWI/SNF complex component SNF2; AltName: Full=Transcription factor TYE3 gi|4500|emb|CAA40969.1| GAM1/SNF2 protein [Saccharomyces cerevisiae] gi|172632|gb|AAA35059.1| SNF2protein [Saccharomyces cerevisiae] gi|806532|dbj|BAA14423.1| RIC1 [Saccharomyces cerevisiae] gi|1279713|emb|CAA61793.1| regulatory protein gam1 [Saccharomyces cerevisiae] gi|1420644|emb|CAA99517.1| SNF2 [Saccharomyces cerevisiae] gi|285815161|tpg|DAA11054.1| TPA: Snf2p [Saccharomyces cerevisiae S288c] Length = 1703 Score = 91.5 bits (226), Expect = 6e-17, Method: Composition-based stats. Identities = 32/159 (20%), Positives = 62/159 (38%), Gaps = 20/159 (12%) Query: 55 KIKALEVIIEK--ANAAPIIVAYHFNSDLAR---------LQKAFPQGRTL-DKDPCTIQ 102 K + L+ I+ K A +++ + + ++ G T D+ ++ Sbjct: 1088 KFELLDRILPKLKATGHRVLIFFQMTQIMDIMEDFLRYINIKYLRLDGHTKSDERSELLR 1147 Query: 103 EWNEGKIPL--LFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 +N + G GLNLQ + ++ F W+ + Q R + G Sbjct: 1148 LFNAPDSEYLCFILSTRAGGLGLNLQT-ADTVIIFDTDWNPHQDLQA-----QDRAHRIG 1201 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 K V + LI N+++E++L+R K I ++ A K Sbjct: 1202 QKNEVRILRLITTNSVEEVILERAYKKLDIDGKVIQAGK 1240 >gi|302659152|ref|XP_003021270.1| hypothetical protein TRV_04621 [Trichophyton verrucosum HKI 0517] gi|291185160|gb|EFE40652.1| hypothetical protein TRV_04621 [Trichophyton verrucosum HKI 0517] Length = 922 Score = 91.5 bits (226), Expect = 7e-17, Method: Composition-based stats. Identities = 27/103 (26%), Positives = 45/103 (43%), Gaps = 9/103 (8%) Query: 96 KDPCTIQEWN---EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIG 152 K ++++N + G GLNL G + LV F + W+ Q + RI Sbjct: 645 KRQALVEDFNRSPSSSCFAFLLSAKAGGTGLNL-IGASRLVLFDVDWNPATDIQAMARI- 702 Query: 153 VTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 + G KR +Y L+ + I+E + QR TK + D ++ Sbjct: 703 ----HRDGQKRHCHIYRLLLKGGIEEKIWQRQVTKLGLADSVM 741 >gi|213408929|ref|XP_002175235.1| SNF2 family helicase Rhp26 [Schizosaccharomyces japonicus yFS275] gi|212003282|gb|EEB08942.1| SNF2 family helicase Rhp26 [Schizosaccharomyces japonicus yFS275] Length = 983 Score = 91.5 bits (226), Expect = 7e-17, Method: Composition-based stats. Identities = 36/172 (20%), Positives = 67/172 (38%), Gaps = 26/172 (15%) Query: 38 GAVYYDEEKHWKEVHDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKA-------- 87 G Y D +K K+K ++ +++ K+ ++ L L+KA Sbjct: 618 GYEYGDPKK------SGKLKVVQALLKLWKSQNHRTLLFSQTRQMLDILEKAIGSMGDIS 671 Query: 88 ---FPQGRTLDKDPCTIQEWNE-GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEE 143 ++ + E+N+ + + G G+NL G + ++ F W+ Sbjct: 672 YCRMDGTTSIGLRQGLVDEFNKTSRYDVFLLTTRVGGLGINLT-GADRVIIFDPDWNPST 730 Query: 144 HQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 Q ER + G KR V VY L++ TI+E + R K + + +L Sbjct: 731 DAQARERAW-----RLGQKRDVVVYRLMSSGTIEEKIYHRQIFKQFLTNKIL 777 >gi|148675185|gb|EDL07132.1| mCG19747 [Mus musculus] Length = 1723 Score = 91.5 bits (226), Expect = 7e-17, Method: Composition-based stats. Identities = 25/161 (15%), Positives = 59/161 (36%), Gaps = 20/161 (12%) Query: 52 HDEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQKAF---------PQGRTLDK-DPC 99 K+ L+ ++ + +++ L L + G + Sbjct: 796 SSGKLILLDKLLTRLRERGNRVLIFSQMVRMLDILAEYLTIKHYPFQRLDGSIKGEIRKQ 855 Query: 100 TIQEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 + +N + + G G+NL + +V F W+ + Q R Sbjct: 856 ALDHFNADGSEDFCFLLSTRAGGLGINL-ASADTVVIFDSDWNPQNDLQAQAR-----AH 909 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNAL 198 + G K+ V +Y L+ + T++E +++R + K + L++ + Sbjct: 910 RIGQKKQVNIYRLVTKGTVEEEIIERAKKKMVLDHLVIQRM 950 >gi|26340418|dbj|BAC33872.1| unnamed protein product [Mus musculus] Length = 1081 Score = 91.5 bits (226), Expect = 7e-17, Method: Composition-based stats. Identities = 27/153 (17%), Positives = 56/153 (36%), Gaps = 21/153 (13%) Query: 68 AAPIIVAYHFNSDLARLQKAFP---------QGRTLDK-DPCTIQEWN-EGKIPL-LFAH 115 +++ L L + G + + +N EG Sbjct: 802 GNRVLIFSQMVRMLDILAEYLKYRQFPFQRLDGSIKGELRKQALDHFNAEGSEDFCFLLS 861 Query: 116 PASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNT 175 + G G+NL + +V F W+ + Q R + G K+ V +Y L+ + + Sbjct: 862 TRAGGLGINL-ASADTVVIFDSDWNPQNDLQAQAR-----AHRIGQKKQVNIYRLVTKGS 915 Query: 176 IDELVLQRLRTKSTIQDLL---LNALKKETIHV 205 ++E +L+R + K + L+ ++ K +H Sbjct: 916 VEEDILERAKKKMVLDHLVIQRMDTTGKTVLHT 948 >gi|74227041|dbj|BAE38319.1| unnamed protein product [Mus musculus] Length = 883 Score = 91.5 bits (226), Expect = 7e-17, Method: Composition-based stats. Identities = 33/216 (15%), Positives = 78/216 (36%), Gaps = 33/216 (15%) Query: 1 MKQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYD-------EEKHWKEVHD 53 MK F+ E + ++ N ++ KC + +D E Sbjct: 289 MKDLDAFENET-----AKKVKLQNILTQLRKC---VDHPYLFDGVEPEPFEVGEHLIEAS 340 Query: 54 EKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAFP---------QGRTLDKDPC-TI 101 K+ L+ ++ + +++ L LQ G ++ I Sbjct: 341 GKLHLLDRLLAFLYSGGHRVLLFSQMTHMLDILQDYMDYRGYSYERVDGSVRGEERHLAI 400 Query: 102 QEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGF 161 + + I + + G G+NL + ++F ++ + Q R + G Sbjct: 401 KNFGNQPIFVFLLSTRAGGVGMNLT-AADTVIFVDSDFNPQNDLQAAAR-----AHRIGQ 454 Query: 162 KRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 ++V V LI ++T++E+V ++ +K + ++++ Sbjct: 455 NKSVKVIRLIGRDTVEEIVYRKAASKLQLTNMVIEG 490 >gi|151945372|gb|EDN63615.1| transcriptional regulator [Saccharomyces cerevisiae YJM789] Length = 1706 Score = 91.5 bits (226), Expect = 7e-17, Method: Composition-based stats. Identities = 32/159 (20%), Positives = 62/159 (38%), Gaps = 20/159 (12%) Query: 55 KIKALEVIIEK--ANAAPIIVAYHFNSDLAR---------LQKAFPQGRTL-DKDPCTIQ 102 K + L+ I+ K A +++ + + ++ G T D+ ++ Sbjct: 1091 KFELLDRILPKLKATGHRVLIFFQMTQIMDIMEDFLRYINIKYLRLDGHTKSDERSELLR 1150 Query: 103 EWNEGKIPL--LFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 +N + G GLNLQ + ++ F W+ + Q R + G Sbjct: 1151 LFNAPDSEYLCFILSTRAGGLGLNLQT-ADTVIIFDTDWNPHQDLQA-----QDRAHRIG 1204 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 K V + LI N+++E++L+R K I ++ A K Sbjct: 1205 QKNEVRILRLITTNSVEEVILERAYKKLDIDGKVIQAGK 1243 >gi|50547625|ref|XP_501282.1| YALI0C00363p [Yarrowia lipolytica] gi|49647149|emb|CAG81577.1| YALI0C00363p [Yarrowia lipolytica] Length = 1320 Score = 91.5 bits (226), Expect = 7e-17, Method: Composition-based stats. Identities = 33/181 (18%), Positives = 69/181 (38%), Gaps = 22/181 (12%) Query: 31 KCLQLA-NGAVYYDEEKHWKEVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARL--- 84 K L LA NGA + + + K+ L+ ++ + + +++ L L Sbjct: 591 KFLSLAENGASRENVFRGMI-MTSGKMVLLDKLLTQLKKDGHRVLIFSQMVRMLDILGDY 649 Query: 85 -------QKAFPQGRTLDKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFF 135 + I +N + + G G+NL + ++ F Sbjct: 650 LQIKGYQFQRLDGTVPSATRRIAIDHYNAPDSNDFVFLLSTRAGGLGINLMT-ADTVIIF 708 Query: 136 SLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 W+ + Q + R + G K V VY ++++T++E VL+R R K ++ ++ Sbjct: 709 DSDWNPQADLQAMAR-----AHRIGQKNHVMVYRFVSKDTVEEQVLERARKKMILEYAII 763 Query: 196 N 196 + Sbjct: 764 S 764 >gi|190407590|gb|EDV10857.1| transcription regulatory protein SNF2 [Saccharomyces cerevisiae RM11-1a] Length = 1706 Score = 91.5 bits (226), Expect = 7e-17, Method: Composition-based stats. Identities = 32/159 (20%), Positives = 62/159 (38%), Gaps = 20/159 (12%) Query: 55 KIKALEVIIEK--ANAAPIIVAYHFNSDLAR---------LQKAFPQGRTL-DKDPCTIQ 102 K + L+ I+ K A +++ + + ++ G T D+ ++ Sbjct: 1091 KFELLDRILPKLKATGHRVLIFFQMTQIMDIMEDFLRYINIKYLRLDGHTKSDERSELLR 1150 Query: 103 EWNEGKIPL--LFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 +N + G GLNLQ + ++ F W+ + Q R + G Sbjct: 1151 LFNAPDSEYLCFILSTRAGGLGLNLQT-ADTVIIFDTDWNPHQDLQA-----QDRAHRIG 1204 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 K V + LI N+++E++L+R K I ++ A K Sbjct: 1205 QKNEVRILRLITTNSVEEVILERAYKKLDIDGKVIQAGK 1243 >gi|167392422|ref|XP_001740146.1| chromodomain helicase DNA binding protein [Entamoeba dispar SAW760] gi|165895824|gb|EDR23413.1| chromodomain helicase DNA binding protein, putative [Entamoeba dispar SAW760] Length = 1623 Score = 91.5 bits (226), Expect = 7e-17, Method: Composition-based stats. Identities = 29/157 (18%), Positives = 60/157 (38%), Gaps = 18/157 (11%) Query: 52 HDEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQKAF---------PQGRTLDKDPC- 99 K+ L+ ++ K N +++ L L+K G D Sbjct: 964 SSGKMVLLDKLLPKLNTDGHKVLIFSQLKGVLDILEKYLSYKKYTYERLDGSVRSNDRQN 1023 Query: 100 TIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQA 159 I + +G+ + + G G+NL + ++ + W+ + Q R + Sbjct: 1024 AIDRFMKGERFVFLLCTRAGGIGINLSE-ADTVIIYDSDWNPQNDLQAQARC-----HRI 1077 Query: 160 GFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 G K+ V VY L+++NT + + +R K + +L+ Sbjct: 1078 GQKKEVKVYRLVSKNTYERYMFERASMKLGLDQAILS 1114 >gi|123503388|ref|XP_001328501.1| F/Y-rich N-terminus family protein [Trichomonas vaginalis G3] gi|121911445|gb|EAY16278.1| F/Y-rich N-terminus family protein [Trichomonas vaginalis G3] Length = 1247 Score = 91.5 bits (226), Expect = 7e-17, Method: Composition-based stats. Identities = 24/147 (16%), Positives = 49/147 (33%), Gaps = 18/147 (12%) Query: 67 NAAPIIVAYHFNSDLARLQ-----KAFPQGRTLD-----KDPCTIQEWNEG--KIPLLFA 114 +++ F L +Q K R + I ++ IP+ Sbjct: 497 EGHRVLIFSQFTLILDIIQDYLNLKGIKYVRLDGNVRGPERQAAIDNFSRDGSDIPIFLL 556 Query: 115 HPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQN 174 + G G+NL + ++ + W+ + Q R + G ++V VY + N Sbjct: 557 TTRAGGQGINLT-AADTVIIYDSDWNPQNDIQATARC-----HRIGQTKSVKVYRFLTSN 610 Query: 175 TIDELVLQRLRTKSTIQDLLLNALKKE 201 + + + K + +L KE Sbjct: 611 SYERSMFDIASRKLGLDHAVLEGSSKE 637 >gi|119495934|ref|XP_001264742.1| chromodomain helicase (Chd1), putative [Neosartorya fischeri NRRL 181] gi|119412904|gb|EAW22845.1| chromodomain helicase (Chd1), putative [Neosartorya fischeri NRRL 181] Length = 1523 Score = 91.5 bits (226), Expect = 7e-17, Method: Composition-based stats. Identities = 33/216 (15%), Positives = 73/216 (33%), Gaps = 35/216 (16%) Query: 1 MKQYHKFQRELYCDL-QGENIEAFNSASKTVKCLQLANG-AVYYDEEKHWKEVHDEKIKA 58 ++ Y + Y L G + + + ++ + +N ++ + E E + Sbjct: 691 LEYYKNILTKNYAALNDGAQGQKQSLLNIMMELKKASNHPFMFPNAEAKILEGSTRREDV 750 Query: 59 LEVIIEKA---------------NAAPIIVAYHFNSDLARL----------QKAFPQGRT 93 L +I + + +++ L L + Sbjct: 751 LRALITSSGKMMLLDQLLAKLKRDGHRVLIFSQMVKMLDLLGDYMESRGYSYQRLDGTIP 810 Query: 94 LDKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERI 151 I+ +N + G G+NL + ++ F W+ + Q + R Sbjct: 811 AASRRLAIEHFNAPGSSDFCFLLSTRAGGLGINLMT-ADTVILFDSDWNPQADLQAMAR- 868 Query: 152 GVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTK 187 + G R V VY L++++T++E V++R R K Sbjct: 869 ----AHRIGQTRPVSVYRLVSKDTVEEEVIERARNK 900 >gi|66771903|gb|AAY55263.1| IP13006p [Drosophila melanogaster] Length = 726 Score = 91.5 bits (226), Expect = 7e-17, Method: Composition-based stats. Identities = 33/151 (21%), Positives = 64/151 (42%), Gaps = 18/151 (11%) Query: 56 IKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGR----------TLDKDPCTIQEWN 105 I LE ++ N IIV + S LA ++K T + ++++N Sbjct: 557 IDKLEELLTGTNDK-IIVTSQWVSYLAIVRKRLQDLSWETLDFNGQLTAKEREIVLRDFN 615 Query: 106 -EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA 164 + +L + G GLNL ++L+ L W+ + +Q +RI + G + Sbjct: 616 ANNEKRVLLLSLTAGGVGLNLNVANHMLI-VDLHWNPQLERQAQDRI-----YRYGQTKP 669 Query: 165 VFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 F+Y + Q+T+++ + K I ++L Sbjct: 670 TFIYRYMCQDTVEQRIKSLQDCKLEIAKVVL 700 >gi|19115773|ref|NP_594861.1| ATP-dependent DNA helicase Snf21 [Schizosaccharomyces pombe 972h-] gi|46397295|sp|Q9UTN6|SNF21_SCHPO RecName: Full=Chromatin structure-remodeling complex subunit snf21; AltName: Full=ATP-dependent helicase snf21; AltName: Full=RSC complex subunit snf21 gi|5830480|emb|CAB54824.1| ATP-dependent DNA helicase Snf21 [Schizosaccharomyces pombe] gi|42558224|dbj|BAD11105.1| SNF2-family ATP dependent chromatin remodeling factor snf21 [Schizosaccharomyces pombe] Length = 1199 Score = 91.5 bits (226), Expect = 7e-17, Method: Composition-based stats. Identities = 40/225 (17%), Positives = 81/225 (36%), Gaps = 33/225 (14%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQL---ANG-AVYYDEEKHWKEVH----- 52 K Y++ ++ ++ +QL N V+ D E+ Sbjct: 671 KLYYQMKKHGMLYVEDAKRGKTGIKGLQNTVMQLKKICNHPFVFEDVERSIDPTGFNYDM 730 Query: 53 ----DEKIKALEVIIEKA--NAAPIIVAYHFNSDLARL---------QKAFPQGRTL-DK 96 K + L+ I+ K + I++ + + + + G T D Sbjct: 731 LWRVSGKFELLDRILPKLFRSGHRILMFFQMTQIMNIMEDYLHYRQWRYLRLDGSTKADD 790 Query: 97 DPCTIQEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 + +N+ ++ L + G GLNLQ + ++ F W+ + Q Sbjct: 791 RSKLLGVFNDPTAEVNLFLLSTRAGGLGLNLQT-ADTVIIFDSDWNPHQDLQA-----QD 844 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 R + G + V +Y LI + +++E +L R + K I ++ A K Sbjct: 845 RAHRIGQTKEVRIYRLITEKSVEENILARAQYKLDIDGKVIQAGK 889 >gi|297741672|emb|CBI32804.3| unnamed protein product [Vitis vinifera] Length = 819 Score = 91.5 bits (226), Expect = 7e-17, Method: Composition-based stats. Identities = 31/167 (18%), Positives = 58/167 (34%), Gaps = 32/167 (19%) Query: 42 YDEEKHWKEVHDEKIKALEVIIEKANAA----PIIVAYHFNSDLARLQKAFPQGRTLDKD 97 Y+ E E K+ L + + +V F L L++ Sbjct: 659 YNSEIPSSECTSSKVLTLLKFLSASRDQNPSTKSVVFSQFRKMLLLLEQPLKAA------ 712 Query: 98 PCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 +L A + G G+NL + + WW+ +Q ++R+ Sbjct: 713 -------------VLLASLKASGAGINLT-AASRVYLLEPWWNPAVEEQAMDRV-----H 753 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIH 204 + G K V + LIA+N+I+E +L+ K + A + + Sbjct: 754 RIGQKEDVKIVRLIARNSIEERILELQERKKKLAK---EAFGRRGLK 797 >gi|119622565|gb|EAX02160.1| chromodomain helicase DNA binding protein 2, isoform CRA_a [Homo sapiens] gi|119622567|gb|EAX02162.1| chromodomain helicase DNA binding protein 2, isoform CRA_a [Homo sapiens] gi|119622569|gb|EAX02164.1| chromodomain helicase DNA binding protein 2, isoform CRA_a [Homo sapiens] gi|239740390|gb|ACS13730.1| chromodomain-helicase-dna-binding protein 2 [Homo sapiens] Length = 1739 Score = 91.5 bits (226), Expect = 7e-17, Method: Composition-based stats. Identities = 25/161 (15%), Positives = 59/161 (36%), Gaps = 20/161 (12%) Query: 52 HDEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQKAF---------PQGRTLDK-DPC 99 K+ L+ ++ + +++ L L + G + Sbjct: 789 SSGKLILLDKLLTRLRERGNRVLIFSQMVRMLDILAEYLTIKHYPFQRLDGSIKGEIRKQ 848 Query: 100 TIQEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 + +N + + G G+NL + +V F W+ + Q R Sbjct: 849 ALDHFNADGSEDFCFLLSTRAGGLGINL-ASADTVVIFDSDWNPQNDLQAQAR-----AH 902 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNAL 198 + G K+ V +Y L+ + T++E +++R + K + L++ + Sbjct: 903 RIGQKKQVNIYRLVTKGTVEEEIIERAKKKMVLDHLVIQRM 943 >gi|2645435|gb|AAB87384.1| CHD3 [Drosophila melanogaster] Length = 1518 Score = 91.5 bits (226), Expect = 7e-17, Method: Composition-based stats. Identities = 25/154 (16%), Positives = 59/154 (38%), Gaps = 22/154 (14%) Query: 52 HDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTL-----------DKDP 98 K+ L ++++ A+ +++ L + + F +G D Sbjct: 587 ASGKLDLLSKMLKQLKADNHRVLLFSQMTKMLN-ILEHFLEGEGYQYDRIDGSIKGDLRQ 645 Query: 99 CTIQEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 I +N+ + + + G G+NL + ++ F W+ Q +R Sbjct: 646 KAIDRFNDPVSEHFVFLLSTRAGGLGINL-ATADTVIIFDSDWNPHNDVQA-----FSRA 699 Query: 157 RQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 + G K+ V +Y + N+++E ++Q + K + Sbjct: 700 HRMGQKKKVMIYRFVTHNSVEERIMQVAKHKMML 733 >gi|2645431|gb|AAB87382.1| CHD2 [Homo sapiens] Length = 1739 Score = 91.5 bits (226), Expect = 7e-17, Method: Composition-based stats. Identities = 25/161 (15%), Positives = 59/161 (36%), Gaps = 20/161 (12%) Query: 52 HDEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQKAF---------PQGRTLDK-DPC 99 K+ L+ ++ + +++ L L + G + Sbjct: 789 SSGKLILLDKLLTRLRERGNRVLIFSQMVRMLDILAEYLTIKHYPFQRLDGSIKGEIRKQ 848 Query: 100 TIQEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 + +N + + G G+NL + +V F W+ + Q R Sbjct: 849 ALDHFNADGSEDFCFLLSTRAGGLGINL-ASADTVVIFDSDWNPQNDLQAQAR-----AH 902 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNAL 198 + G K+ V +Y L+ + T++E +++R + K + L++ + Sbjct: 903 RIGQKKQVNIYRLVTKGTVEEEIIERAKKKMVLDHLVIQRM 943 >gi|66359998|ref|XP_627177.1| SNF2L ortholog with a SWI/SNF2 like ATpase and a Myb domain [Cryptosporidium parvum Iowa II] gi|46228591|gb|EAK89461.1| SNF2L ortholog with a SWI/SNF2 like ATpase and a Myb domain [Cryptosporidium parvum Iowa II] Length = 1308 Score = 91.5 bits (226), Expect = 7e-17, Method: Composition-based stats. Identities = 40/222 (18%), Positives = 87/222 (39%), Gaps = 38/222 (17%) Query: 6 KFQRELYCDLQGENIEAFNSAS--------KTVKCLQLANGAVYYD---------EEKHW 48 K Q+++Y +L N++ NSAS ++ + N +D E H Sbjct: 451 KLQKKIYSELLTRNLDVLNSASSNKTQMLNLLMQLRKTCNHPYLFDGVEPGPPYVEGFHM 510 Query: 49 KEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKA-----FPQGRTLDKDPCT- 100 E K+ L ++ K + + +++ L + +P R P Sbjct: 511 VE-ASGKMVLLHKLLPKLFSQGSRVLLFSQMTRLLDIIDDYLRWCGYPYCRIDGSTPGIE 569 Query: 101 ----IQEWNE--GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 I +N+ + + + G G+NL ++++ F ++ + Q ++R Sbjct: 570 RQERIDIFNKEGSEKLIFLLSTRAGGIGINL-ATADVVILFDSDFNPQMDLQAMDR---- 624 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + G K+ V VY + + T++E +++R K + L++ Sbjct: 625 -AHRIGQKKPVTVYRFVTEKTVEERIVERAAKKLKLDSLIIQ 665 >gi|327263233|ref|XP_003216425.1| PREDICTED: chromodomain-helicase-DNA-binding protein 1-like [Anolis carolinensis] Length = 1803 Score = 91.5 bits (226), Expect = 7e-17, Method: Composition-based stats. Identities = 31/181 (17%), Positives = 65/181 (35%), Gaps = 36/181 (19%) Query: 55 KIKALEVIIEKAN---------------AAPIIVAYHFNSDLARLQKAFP---------Q 90 K +AL+ +I + + +++ L L + Sbjct: 776 KQEALQNLIRSSGKLILLDKLLIRLRERGSRVLIFSQMVRMLDILAEYLKYRQFPFQRLD 835 Query: 91 GRTLDK-DPCTIQEWN-EGKIPL-LFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQM 147 G + + +N EG + G G+NL + +V F W+ + Q Sbjct: 836 GSIKGELRKQALDHFNAEGSEDFCFLLSTRAGGLGINL-ASADTVVIFDSDWNPQNDLQA 894 Query: 148 IERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL---LNALKKETIH 204 R + G K+ V +Y L+ + +++E +L+R + K + L+ ++ K +H Sbjct: 895 QAR-----AHRIGQKKQVNIYRLVTKGSVEEDILERAKKKMVLDHLVIQRMDTTGKTVLH 949 Query: 205 V 205 Sbjct: 950 T 950 >gi|296204004|ref|XP_002806940.1| PREDICTED: LOW QUALITY PROTEIN: chromodomain-helicase-DNA-binding protein 2-like [Callithrix jacchus] Length = 1738 Score = 91.5 bits (226), Expect = 7e-17, Method: Composition-based stats. Identities = 25/161 (15%), Positives = 59/161 (36%), Gaps = 20/161 (12%) Query: 52 HDEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQKAF---------PQGRTLDK-DPC 99 K+ L+ ++ + +++ L L + G + Sbjct: 774 SSGKLILLDKLLTRLRERGNRVLIFSQMVRMLDILAEYLTIKHYPFQRLDGSIKGEIRKQ 833 Query: 100 TIQEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 + +N + + G G+NL + +V F W+ + Q R Sbjct: 834 ALDHFNADGSEDFCFLLSTRAGGLGINL-ASADTVVIFDSDWNPQNDLQAQAR-----AH 887 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNAL 198 + G K+ V +Y L+ + T++E +++R + K + L++ + Sbjct: 888 RIGQKKQVNIYRLVTKGTVEEEIIERAKKKMVLDHLVIQRM 928 >gi|302915751|ref|XP_003051686.1| SNF2 family chromodomain-helicase DNA-binding protein [Nectria haematococca mpVI 77-13-4] gi|256732625|gb|EEU45973.1| SNF2 family chromodomain-helicase DNA-binding protein [Nectria haematococca mpVI 77-13-4] Length = 1557 Score = 91.5 bits (226), Expect = 7e-17, Method: Composition-based stats. Identities = 35/174 (20%), Positives = 68/174 (39%), Gaps = 20/174 (11%) Query: 38 GAVYYDEEKHWKEVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQKAFP----QG 91 G+V +++ K+ L+ ++ K + +++ L L + Sbjct: 753 GSVRREDQIKGLIASSGKMMLLDQLLSKLKKDGHRVLIFSQMVKMLDILGDYLSLRGYKF 812 Query: 92 RTLDKD------PCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEE 143 + LD I +N + G G+NL + +V F W+ + Sbjct: 813 QRLDGTIAAGPRRMAINHFNADDSDDFCFLLSTRAGGLGINLMT-ADTVVIFDSDWNPQA 871 Query: 144 HQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 Q + R + G KR V +Y L+++ T++E VL+R R K ++ L + A Sbjct: 872 DLQAMAR-----AHRIGQKRPVNIYRLVSKETVEEEVLERARNKLLLEYLTIQA 920 >gi|255955967|ref|XP_002568736.1| Pc21g17380 [Penicillium chrysogenum Wisconsin 54-1255] gi|211590447|emb|CAP96635.1| Pc21g17380 [Penicillium chrysogenum Wisconsin 54-1255] Length = 1399 Score = 91.5 bits (226), Expect = 7e-17, Method: Composition-based stats. Identities = 30/159 (18%), Positives = 63/159 (39%), Gaps = 20/159 (12%) Query: 55 KIKALEVIIE--KANAAPIIVAYHFNSD---------LARLQKAFPQGRTLDKDPCTI-Q 102 K + L+ I+ +A +++ + L ++ G T D + + Sbjct: 853 KFELLDRILPKFRATGHRVLMFFQMTQIMNIMEDFLRLRGMKYLRLDGSTKSDDRSDLLR 912 Query: 103 EWNEGKIPLL--FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 ++N + G GLNLQ + ++ + W+ + Q R + G Sbjct: 913 QFNAPDSEYFCFLLSTRAGGLGLNLQT-ADTVIIYDSDWNPHQDLQA-----QDRAHRIG 966 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 K V + LI+ N+++E +L+R + K + ++ A K Sbjct: 967 QKNEVRILRLISSNSVEEKILERAQFKLDMDGKVIQAGK 1005 >gi|159131149|gb|EDP56262.1| chromodomain helicase (Chd1), putative [Aspergillus fumigatus A1163] Length = 1523 Score = 91.5 bits (226), Expect = 7e-17, Method: Composition-based stats. Identities = 33/216 (15%), Positives = 73/216 (33%), Gaps = 35/216 (16%) Query: 1 MKQYHKFQRELYCDL-QGENIEAFNSASKTVKCLQLANG-AVYYDEEKHWKEVHDEKIKA 58 ++ Y + Y L G + + + ++ + +N ++ + E E + Sbjct: 691 LEYYKNILTKNYAALNDGAQGQKQSLLNIMMELKKASNHPFMFPNAEAKILEGSTRREDV 750 Query: 59 LEVIIEKA---------------NAAPIIVAYHFNSDLARL----------QKAFPQGRT 93 L +I + + +++ L L + Sbjct: 751 LRALITSSGKMMLLDQLLAKLKRDGHRVLIFSQMVKMLDLLGDYMESRGYSYQRLDGTIP 810 Query: 94 LDKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERI 151 I+ +N + G G+NL + ++ F W+ + Q + R Sbjct: 811 AASRRLAIEHFNAPGSSDFCFLLSTRAGGLGINLMT-ADTVILFDSDWNPQADLQAMAR- 868 Query: 152 GVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTK 187 + G R V VY L++++T++E V++R R K Sbjct: 869 ----AHRIGQTRPVSVYRLVSKDTVEEEVIERARNK 900 >gi|114658985|ref|XP_510607.2| PREDICTED: chromodomain helicase DNA binding protein 2 isoform 10 [Pan troglodytes] Length = 1739 Score = 91.5 bits (226), Expect = 7e-17, Method: Composition-based stats. Identities = 25/161 (15%), Positives = 59/161 (36%), Gaps = 20/161 (12%) Query: 52 HDEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQKAF---------PQGRTLDK-DPC 99 K+ L+ ++ + +++ L L + G + Sbjct: 789 SSGKLILLDKLLTRLRERGNRVLIFSQMVRMLDILAEYLTIKHYPFQRLDGSIKGEIRKQ 848 Query: 100 TIQEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 + +N + + G G+NL + +V F W+ + Q R Sbjct: 849 ALDHFNADGSEDFCFLLSTRAGGLGINL-ASADTVVIFDSDWNPQNDLQAQAR-----AH 902 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNAL 198 + G K+ V +Y L+ + T++E +++R + K + L++ + Sbjct: 903 RIGQKKQVNIYRLVTKGTVEEEIIERAKKKMVLDHLVIQRM 943 >gi|326431300|gb|EGD76870.1| BTAF1 protein [Salpingoeca sp. ATCC 50818] Length = 1863 Score = 91.5 bits (226), Expect = 7e-17, Method: Composition-based stats. Identities = 26/120 (21%), Positives = 51/120 (42%), Gaps = 7/120 (5%) Query: 78 NSDLARLQKAFPQGRTLDKDPCTIQEWNE-GKIPLLFAHPASCGHGLNLQYGGNILVFFS 136 A + + E+N+ + +L + G GLNL G + ++F Sbjct: 1671 RHMPALTYRRLDGDTPTHMRAEVVAEFNDDPTVDVLLLTTSVGGLGLNLT-GADTVIFLE 1729 Query: 137 LWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 W+ + Q ++R + G R V VY LI +NT++E ++ R K + + +++ Sbjct: 1730 HDWNPMKDLQAMDR-----AHRIGQGRTVNVYRLITRNTLEEKIMNLQRFKLNMANTIVS 1784 >gi|321264770|ref|XP_003197102.1| swi2/Snf2-related ATPase, component of the SWR1 complex; Swr1p [Cryptococcus gattii WM276] gi|317463580|gb|ADV25315.1| Swi2/Snf2-related ATPase, component of the SWR1 complex, putative; Swr1p [Cryptococcus gattii WM276] Length = 932 Score = 91.5 bits (226), Expect = 7e-17, Method: Composition-based stats. Identities = 33/141 (23%), Positives = 61/141 (43%), Gaps = 17/141 (12%) Query: 65 KANAAPIIVAYHFNSDLARLQKAF---------PQGRTL-DKDPCTIQEWNEG-KIPLLF 113 KA +++ F L L+ A G+T D+ + E+N+ I + Sbjct: 759 KAEGKRMLLFSQFVMILDILEGALNHLGIRYTRLDGQTKTDERQSLVDEFNDDTSITVFL 818 Query: 114 AHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQ 173 + G G+NL +++V + ++ +R R + G +R V V LI + Sbjct: 819 LSTKAGGVGINLT-AASVVVIYDQDFNPH-----NDRQAADRAYRIGQEREVEVIKLITK 872 Query: 174 NTIDELVLQRLRTKSTIQDLL 194 N+IDE +L+ TK + D++ Sbjct: 873 NSIDEDMLEIGLTKLQLDDMV 893 >gi|258573753|ref|XP_002541058.1| hypothetical protein UREG_00572 [Uncinocarpus reesii 1704] gi|237901324|gb|EEP75725.1| hypothetical protein UREG_00572 [Uncinocarpus reesii 1704] Length = 1290 Score = 91.5 bits (226), Expect = 7e-17, Method: Composition-based stats. Identities = 24/146 (16%), Positives = 53/146 (36%), Gaps = 18/146 (12%) Query: 68 AAPIIVAYHFNSDLARLQKAFPQGRTLD----------KDPCTIQEWNEGKIP--LLFAH 115 +++ F L ++ L + I ++N P Sbjct: 806 GHRVLIFSQFLGFLDIIEDFLDGLGLLHLRLDGSLSSLQRQKRIDQFNAPNSPYFTFLLS 865 Query: 116 PASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNT 175 + G G+NL + ++ ++ + Q + R + G +R V V+ L+ + T Sbjct: 866 TRAGGVGINL-ATADTVIIMDPDFNPHQDIQALSR-----AHRIGQQRKVLVFQLMTKGT 919 Query: 176 IDELVLQRLRTKSTIQDLLLNALKKE 201 ++E ++Q R K + L+ + E Sbjct: 920 VEEKIIQIGRKKMALDQALIGFMDAE 945 >gi|94733808|emb|CAK04334.1| novel protein similar to human chromodomain helicase DNA binding protein 2 (CHD2) [Danio rerio] Length = 1694 Score = 91.5 bits (226), Expect = 7e-17, Method: Composition-based stats. Identities = 27/158 (17%), Positives = 59/158 (37%), Gaps = 20/158 (12%) Query: 55 KIKALEVIIEKAN--AAPIIVAYHFNSDLARLQKAF---------PQGRTLDK-DPCTIQ 102 K+ L+ ++ + +++ L L G + + Sbjct: 787 KLVLLDKLLTRLKDRGNRVLIFSQMVRMLDILADYLSMKRYQFQRLDGSIKGELRKQALD 846 Query: 103 EWN-EGKIPL-LFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 +N EG + G G+NL + +V F W+ + Q R + G Sbjct: 847 HFNAEGSEDFCFLLSTRAGGLGINL-ASADTVVIFDSDWNPQNDLQAQAR-----AHRIG 900 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNAL 198 K+ V +Y L+ + T++E +++R + K + L++ + Sbjct: 901 QKKQVNIYRLVTKGTVEEDIIERAKKKMVLDHLVIQRM 938 >gi|46125449|ref|XP_387278.1| hypothetical protein FG07102.1 [Gibberella zeae PH-1] Length = 1627 Score = 91.5 bits (226), Expect = 7e-17, Method: Composition-based stats. Identities = 33/174 (18%), Positives = 65/174 (37%), Gaps = 20/174 (11%) Query: 38 GAVYYDEEKHWKEVHDEKIKALEVIIEKAN--AAPIIVAYHFNSDLARL----------Q 85 G+V +++ K+ L+ ++ K N +++ L L Sbjct: 747 GSVRREDQIKGLIASSGKMMLLDQLLSKLNKDGHRVLIFSQMVKMLDILGDYCSLRGYKF 806 Query: 86 KAFPQGRTLDKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEE 143 + I +N + G G+NL + ++ F W+ + Sbjct: 807 QRLDGTIAAGPRRMAINHFNADDSDDFCFLLSTRAGGLGINLMT-ADTVIIFDSDWNPQA 865 Query: 144 HQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 Q + R + G KR V +Y L+++ T++E VL+R R K ++ L + A Sbjct: 866 DLQAMAR-----AHRIGQKRPVNIYRLVSKETVEEEVLERARNKLLLEYLTIQA 914 >gi|322694382|gb|EFY86213.1| chromatin remodelling complex ATPase chain ISW1 [Metarhizium acridum CQMa 102] Length = 1120 Score = 91.2 bits (225), Expect = 7e-17, Method: Composition-based stats. Identities = 41/226 (18%), Positives = 84/226 (37%), Gaps = 43/226 (19%) Query: 6 KFQRELYCDLQGENIEAFNSAS--------KTVKCLQLAN-------------GAVYYDE 44 + Q + Y + ++I+A N A +QL G Y + Sbjct: 427 EMQVKWYQKILEKDIDAVNGAGGKRESKTRLLNIVMQLRKCCNHPYLFEGAEPGPPYTTD 486 Query: 45 EKHWKEVHDEKIKALEVIIEKAN--AAPIIVAYHFNSDLARL---------QKAFPQGRT 93 E + K+ L+ ++ + + +++ + L L + G T Sbjct: 487 EHLV--YNAGKMAVLDKLLVRLQKQGSRVLIFSQMSRLLDILEDYCVFRDYKYCRIDGGT 544 Query: 94 LDKDP-CTIQEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 +D I E+N+ + + + G G+NL +I++ + W+ + Q ++R Sbjct: 545 AHEDRIAAIDEYNKPGSEKFVFLLTTRAGGLGINLTT-ADIVILYDSDWNPQADLQAMDR 603 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + G + V VY + N I+E VL+R K + L++ Sbjct: 604 -----AHRIGQTKQVVVYRFVTDNAIEEKVLERAAQKLRLDQLVIQ 644 >gi|242764399|ref|XP_002340764.1| SNF2 family helicase/ATPase, putative [Talaromyces stipitatus ATCC 10500] gi|218723960|gb|EED23377.1| SNF2 family helicase/ATPase, putative [Talaromyces stipitatus ATCC 10500] Length = 1045 Score = 91.2 bits (225), Expect = 7e-17, Method: Composition-based stats. Identities = 29/159 (18%), Positives = 62/159 (38%), Gaps = 18/159 (11%) Query: 51 VHDEKIKALEVII-EKANAAPIIVAYHFNSDLARLQKAFPQGRT----------LDKDPC 99 V K++AL I+ ++A IV F L +++ + + D Sbjct: 804 VPSTKVRALIRILRKEAPEYKFIVFSVFTQMLDKIEPFLKRAKLGYARYDGSMRNDLREA 863 Query: 100 TIQEW-NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQ 158 ++++ N +L + GLNL + +V +W+ +Q I+R+ + Sbjct: 864 SLEKLRNHSNTRILLCSLRAGALGLNLT-AASRVVILEPFWNPFVEEQAIDRV-----HR 917 Query: 159 AGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 V +Y + +NT++E +L K + + + Sbjct: 918 LNQTIDVKIYKITIKNTVEERILDLQERKRELANATIEG 956 >gi|154334239|ref|XP_001563371.1| DNA excision repair protein [Leishmania braziliensis MHOM/BR/75/M2904] gi|134060387|emb|CAM37551.1| putative DNA excision repair protein [Leishmania braziliensis MHOM/BR/75/M2904] Length = 1258 Score = 91.2 bits (225), Expect = 7e-17, Method: Composition-based stats. Identities = 35/165 (21%), Positives = 62/165 (37%), Gaps = 19/165 (11%) Query: 44 EEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQ---------GR 92 + K+ AL +++++ +++ L ++ Q G Sbjct: 851 SNNPVNLLGSGKLNALLMMLKEWQLFGHRVLIFSQTRMMLDIIENMCEQHAYRYIRMDGE 910 Query: 93 TLDKDPCTI-QEWNEGK-IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 T + +NE I + G G+NL G + +V F W+ Q ER Sbjct: 911 TNGHHRQELMDRFNEDDSIFVALLTTRVGGIGVNL-IGADRVVIFDPDWNPITDVQARER 969 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 + G KR V VY LI +++E +L+R K + D +L Sbjct: 970 AW-----RIGQKREVCVYRLITSGSVEEAILRRQLAKMYVTDKVL 1009 >gi|154421756|ref|XP_001583891.1| F/Y-rich N-terminus family protein [Trichomonas vaginalis G3] gi|121918135|gb|EAY22905.1| F/Y-rich N-terminus family protein [Trichomonas vaginalis G3] Length = 1924 Score = 91.2 bits (225), Expect = 7e-17, Method: Composition-based stats. Identities = 24/152 (15%), Positives = 50/152 (32%), Gaps = 18/152 (11%) Query: 66 ANAAPIIVAYHFNSDLARLQ----------KAFPQGRTLDKDPCTIQEWNEGKIP--LLF 113 + +++ L LQ + D+ I +N+ P + Sbjct: 853 NDGHRVLIFSQMTRMLDILQDYLYNRGYEYERIDGTIRGDERQKAIDRYNKPNSPIFVFL 912 Query: 114 AHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQ 173 + G G+NL + ++ + W+ + Q R + G + V VY I Sbjct: 913 LCTHAGGLGINLT-SADTVIIYDSDWNPQNDIQATARC-----HRIGQTKEVKVYRFITA 966 Query: 174 NTIDELVLQRLRTKSTIQDLLLNALKKETIHV 205 N+ + + R K + +L K+ + Sbjct: 967 NSYERKMFDRASYKLGLDHAVLEGTGKQQMKT 998 >gi|312211534|emb|CBX91619.1| similar to chromatin remodelling complex ATPase chain ISW1 [Leptosphaeria maculans] Length = 1189 Score = 91.2 bits (225), Expect = 7e-17, Method: Composition-based stats. Identities = 40/231 (17%), Positives = 89/231 (38%), Gaps = 43/231 (18%) Query: 6 KFQRELYCDLQGENIEAFNSAS--------KTVKCLQLAN-------------GAVYYDE 44 Q + Y + ++I+A N + +QL G Y + Sbjct: 504 DMQVQWYKKILEKDIDAVNGGAGTKESKTRLLNIVMQLRKCCNHPYLFEGAEPGPPYTTD 563 Query: 45 EKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARL---------QKAFPQGRT 93 E + K+ L+ ++++ A + +++ + L + Q G T Sbjct: 564 EHLV--TNAAKMVMLDKLLKRMKAKGSRVLIFSQMSRVLDIMEDYSVMRGYQYCRIDGST 621 Query: 94 LDKDP-CTIQEWNE--GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 +D I ++N+ + L + G G+NL +++V F W+ + Q ++R Sbjct: 622 AHEDRIQAIDDYNKEGSEKFLFLLTTRAGGLGINLTT-ADVVVLFDSDWNPQADLQAMDR 680 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 + G + V+V+ + ++ I+E VL+R K + L++ + + Sbjct: 681 -----AHRIGQTKQVYVFRFVTESAIEEKVLERAAQKLRLDQLVIQQGRTQ 726 >gi|302681469|ref|XP_003030416.1| hypothetical protein SCHCODRAFT_58011 [Schizophyllum commune H4-8] gi|300104107|gb|EFI95513.1| hypothetical protein SCHCODRAFT_58011 [Schizophyllum commune H4-8] Length = 1312 Score = 91.2 bits (225), Expect = 7e-17, Method: Composition-based stats. Identities = 25/170 (14%), Positives = 65/170 (38%), Gaps = 20/170 (11%) Query: 50 EVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLAR----------LQKAFPQGRTLDKD 97 ++ K+ L+ ++ + + +++ L + + D Sbjct: 548 VMNSGKMVLLDKLLARLRQDGHRVLIFSQMVRMLDILSDYMSLRGYIHQRLDGTIASDAR 607 Query: 98 PCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTR 155 + +N P + G G+NL + ++ F W+ + Q + R Sbjct: 608 KKAMAHFNMPGSPDFAFLLSTRAGGLGINL-ETADTVIIFDSDWNPQNDLQAMAR----- 661 Query: 156 QRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIHV 205 + G K V VY ++++T++E +L++ + K ++ ++N + H+ Sbjct: 662 AHRIGQKSHVSVYRFVSKDTVEEEILEKAKAKMVLEYAIINQMDTTQAHL 711 >gi|258563128|ref|XP_002582309.1| conserved hypothetical protein [Uncinocarpus reesii 1704] gi|237907816|gb|EEP82217.1| conserved hypothetical protein [Uncinocarpus reesii 1704] Length = 939 Score = 91.2 bits (225), Expect = 7e-17, Method: Composition-based stats. Identities = 25/113 (22%), Positives = 46/113 (40%), Gaps = 9/113 (7%) Query: 87 AFPQGRTLDKDPCTIQEWN---EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEE 143 +K + ++N + G GLNL G + LV F + W+ Sbjct: 667 RLDGSTPANKRQYLVDDFNRSSSSSCFAFLLSAKAGGIGLNLT-GASRLVLFDVDWNPAT 725 Query: 144 HQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 Q + RI + G KR +Y ++ + ++E + QR TK + D +++ Sbjct: 726 DIQAMARI-----HRDGQKRHCHIYRMLLRGGLEEKIWQRQVTKIGLADSVMD 773 >gi|195569079|ref|XP_002102539.1| GD19959 [Drosophila simulans] gi|194198466|gb|EDX12042.1| GD19959 [Drosophila simulans] Length = 1069 Score = 91.2 bits (225), Expect = 7e-17, Method: Composition-based stats. Identities = 34/166 (20%), Positives = 63/166 (37%), Gaps = 22/166 (13%) Query: 50 EVHDEKIKALEVIIE----KANAAPIIVAYHFNSDLARLQKAFPQGRT----------LD 95 KI + I++ K++ IV + S L L+ + + Sbjct: 894 HRPSSKINMVIQILKTTILKSSDDKAIVVSQWTSVLDILRDHLSKDGVATLSLNGTIPVK 953 Query: 96 KDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGV 153 + E+N+ +L + G GLNL G N L+ L W+ + Q +RI Sbjct: 954 NRQDIVNEFNDRNNQKRVLLLSLTAGGVGLNL-IGANHLLLLDLHWNPQLEAQAQDRI-- 1010 Query: 154 TRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 + G K+ V +Y + +T+++ + K + D +L K Sbjct: 1011 ---YRVGQKKNVIIYKFMCVDTVEQRIKALQDKKLDLADGVLTGAK 1053 >gi|119494890|ref|XP_001264246.1| dsDNA-dependent ATPase (Rad54b), putative [Neosartorya fischeri NRRL 181] gi|119412408|gb|EAW22349.1| dsDNA-dependent ATPase (Rad54b), putative [Neosartorya fischeri NRRL 181] Length = 969 Score = 91.2 bits (225), Expect = 7e-17, Method: Composition-based stats. Identities = 33/167 (19%), Positives = 67/167 (40%), Gaps = 22/167 (13%) Query: 46 KHWKEVHDEKIKALEVII---EKANAAPIIVAYHFNSDLARLQK----------AFPQGR 92 +H+ KI+ L+ ++ + + I++ ++ S L L Sbjct: 614 RHFSPSCSAKIRVLDQLLHNLRTSTSEKIVLVSNYTSTLNMLANLLNSLSLPFLRLDGST 673 Query: 93 TLDKDPCTIQEWNE---GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIE 149 K ++++N + G GLNL G + LV F + W+ Q + Sbjct: 674 PAQKRQALVEDFNRLPPNLCFAFLLSAKAGGTGLNL-IGASRLVLFDVDWNPATDVQAMA 732 Query: 150 RIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 RI + G KR ++Y ++ + +++E + QR TK + D ++ Sbjct: 733 RI-----HRDGQKRHCWIYRVLLKGSLEERIWQRQVTKIGLADSVME 774 >gi|317140694|ref|XP_001818358.2| SNF2 family helicase/ATPase [Aspergillus oryzae RIB40] Length = 1126 Score = 91.2 bits (225), Expect = 7e-17, Method: Composition-based stats. Identities = 35/162 (21%), Positives = 66/162 (40%), Gaps = 19/162 (11%) Query: 46 KHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFP---------QGRTL 94 K+ + + KI L ++++ N ++ F + L+ GRT Sbjct: 936 KNNEWMDSGKIDKLCELLKRFKENGDRTLIFSQFTMVMDILEHVLENQHLGFVRLDGRTN 995 Query: 95 DKDPCTI-QEWNEG-KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIG 152 +D +I ++E IP+ + G G+NL N +V F ++ +E Q Sbjct: 996 VEDRQSILDAFHERTDIPVFLLSTKAGGAGINL-ACANKVVIFDSSFNPQEDVQA----- 1049 Query: 153 VTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 R + G R V V L+ ++TI+E + +TK + + Sbjct: 1050 ENRAHRVGQTREVEVIRLVTKDTIEEQIYALGQTKLALDQAV 1091 >gi|315032634|gb|EFT44566.1| protein, SNF2 family [Enterococcus faecalis TX0017] Length = 1016 Score = 91.2 bits (225), Expect = 7e-17, Method: Composition-based stats. Identities = 30/152 (19%), Positives = 62/152 (40%), Gaps = 21/152 (13%) Query: 24 NSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDL 81 + + + Q+ + E+ K++ ++ + A N +++ F S L Sbjct: 868 SILAGLTRLRQICCDPRLFIEDYT---GGSGKVEQVKDFLVAAKENNRRVLLFSQFTSML 924 Query: 82 ARLQKA---------FPQGRTLDKDPCTIQE-WNEGKIPLLFAHPASCGHGLNLQYGGNI 131 + L+K + +G T +D T+ +NEG+ + + G GLNL G + Sbjct: 925 SILEKELNELGLETFYLRGSTKPQDRLTMANAFNEGEKDVFLISLKAGGTGLNLT-GADT 983 Query: 132 LVFFSLWWDLEEHQQMIERIGVTRQRQAGFKR 163 ++ + LWW+ +Q R + G K+ Sbjct: 984 VILYDLWWNPAVEEQAAGR-----AHRMGQKK 1010 >gi|289614871|emb|CBI58408.1| unnamed protein product [Sordaria macrospora] Length = 908 Score = 91.2 bits (225), Expect = 7e-17, Method: Composition-based stats. Identities = 41/209 (19%), Positives = 86/209 (41%), Gaps = 22/209 (10%) Query: 1 MKQYHKFQ-RELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKAL 59 MK+ + + R+ + ++A + + C + + W E K++AL Sbjct: 676 MKRVDQSELRQPKIEHLINELKALSDFELHLWCRDYKCIRSFDLPDGSWME--SAKVQAL 733 Query: 60 EVIIEK--ANAAPIIVAYHFNSDLA---------RLQKAFPQGRT-LDKDPCTIQEWN-E 106 +I++ N +V F + +++ QG T + + I E+N + Sbjct: 734 LKLIKQYQKNGDRALVFTRFAKVIEILGECLASEKIEYLSLQGNTDVSERQELINEFNAD 793 Query: 107 GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVF 166 IP+ S G G+NL N ++ F + ++ Q R + G R V Sbjct: 794 ATIPVFLLTTGSGGTGINLT-AANKVIIFDQSDNPQDDIQA-----ENRAHRLGQTRPVE 847 Query: 167 VYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 + LI+++T++ELV + + K + + ++ Sbjct: 848 IIRLISKDTVEELVYKACQKKLELANKVV 876 >gi|70995269|ref|XP_752395.1| chromodomain helicase (Chd1) [Aspergillus fumigatus Af293] gi|66850030|gb|EAL90357.1| chromodomain helicase (Chd1), putative [Aspergillus fumigatus Af293] Length = 1523 Score = 91.2 bits (225), Expect = 7e-17, Method: Composition-based stats. Identities = 33/216 (15%), Positives = 73/216 (33%), Gaps = 35/216 (16%) Query: 1 MKQYHKFQRELYCDL-QGENIEAFNSASKTVKCLQLANG-AVYYDEEKHWKEVHDEKIKA 58 ++ Y + Y L G + + + ++ + +N ++ + E E + Sbjct: 691 LEYYKNILTKNYAALNDGAQGQKQSLLNIMMELKKASNHPFMFPNAEAKILEGSTRREDV 750 Query: 59 LEVIIEKA---------------NAAPIIVAYHFNSDLARL----------QKAFPQGRT 93 L +I + + +++ L L + Sbjct: 751 LRALITSSGKMMLLDQLLAKLKRDGHRVLIFSQMVKMLDLLGDYMESRGYSYQRLDGTIP 810 Query: 94 LDKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERI 151 I+ +N + G G+NL + ++ F W+ + Q + R Sbjct: 811 AASRRLAIEHFNAPGSSDFCFLLSTRAGGLGINLMT-ADTVILFDSDWNPQADLQAMAR- 868 Query: 152 GVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTK 187 + G R V VY L++++T++E V++R R K Sbjct: 869 ----AHRIGQTRPVSVYRLVSKDTVEEEVIERARNK 900 >gi|195111727|ref|XP_002000429.1| GI22534 [Drosophila mojavensis] gi|193917023|gb|EDW15890.1| GI22534 [Drosophila mojavensis] Length = 1070 Score = 91.2 bits (225), Expect = 7e-17, Method: Composition-based stats. Identities = 29/161 (18%), Positives = 59/161 (36%), Gaps = 21/161 (13%) Query: 52 HDEKIKALEVIIEKA---NAAPIIVAYHFNSDLARLQKAFPQGRTL----------DKDP 98 K+ + I++ IV + S L + + + Sbjct: 899 PSTKLLKVLEILKTNVLKTKDKAIVVSQWTSVLDIFRDLLEKEKLKSLSLNGTIPVKNRQ 958 Query: 99 CTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 + ++N+ +L + G GLNL G N L+ L W+ + Q +RI Sbjct: 959 DIVNDFNDPNNSNRILLLSLTAGGVGLNL-IGANHLILLDLHWNPQLEAQAQDRI----- 1012 Query: 157 RQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + G K+ V +Y ++ +T+++ + K + D +L Sbjct: 1013 YRVGQKKDVIIYKIVCVDTVEQRIKALQDRKLELADGVLTG 1053 >gi|125833380|ref|XP_688972.2| PREDICTED: DNA excision repair protein ERCC-6 [Danio rerio] Length = 1390 Score = 91.2 bits (225), Expect = 7e-17, Method: Composition-based stats. Identities = 30/146 (20%), Positives = 52/146 (35%), Gaps = 17/146 (11%) Query: 67 NAAPIIVAYHFNSDLARLQKAFPQ----------GRTLDKDPCTIQEWN-EGKIPLLFAH 115 +++ L L+ + T+ I ++N I + Sbjct: 832 QGHRVLLFTQSRQMLEILEVFVKENGFSYLKMDGTTTIASRQPLIAQFNQNKDIFVFILT 891 Query: 116 PASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNT 175 G G+NL G N +V + W+ Q ER + G K+ V VY L+ T Sbjct: 892 TRVGGLGVNLT-GANRVVIYDPDWNPSTDTQARERAW-----RIGQKQQVTVYRLLTAGT 945 Query: 176 IDELVLQRLRTKSTIQDLLLNALKKE 201 I+E + R K + + +L K+ Sbjct: 946 IEEKIYHRQIFKQFLTNRVLKDPKQR 971 >gi|256272521|gb|EEU07500.1| Snf2p [Saccharomyces cerevisiae JAY291] Length = 1706 Score = 91.2 bits (225), Expect = 7e-17, Method: Composition-based stats. Identities = 32/159 (20%), Positives = 62/159 (38%), Gaps = 20/159 (12%) Query: 55 KIKALEVIIEK--ANAAPIIVAYHFNSDLAR---------LQKAFPQGRTL-DKDPCTIQ 102 K + L+ I+ K A +++ + + ++ G T D+ ++ Sbjct: 1091 KFELLDRILPKLKATGHRVLIFFQMTQIMDIMEDFLRYINIKYLRLDGHTKSDERSELLR 1150 Query: 103 EWNEGKIPL--LFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 +N + G GLNLQ + ++ F W+ + Q R + G Sbjct: 1151 LFNAPDSEYLCFILSTRAGGLGLNLQT-ADTVIIFDTDWNPHQDLQA-----QDRAHRIG 1204 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 K V + LI N+++E++L+R K I ++ A K Sbjct: 1205 QKNEVRILRLITTNSVEEVILERAYKKLDIDGKVIQAGK 1243 >gi|255594207|ref|XP_002536048.1| DNA repair helicase rad5,16, putative [Ricinus communis] gi|223521096|gb|EEF26335.1| DNA repair helicase rad5,16, putative [Ricinus communis] Length = 267 Score = 91.2 bits (225), Expect = 7e-17, Method: Composition-based stats. Identities = 25/127 (19%), Positives = 49/127 (38%), Gaps = 17/127 (13%) Query: 69 APIIVAYHFNSDLARLQKAFP----QGRTLDKD------PCTIQEWNE-GKIPLLFAHPA 117 IV + L L+ Q R LD ++++N ++ ++ Sbjct: 131 EKAIVFSQWTRMLDLLEACLKSSSVQYRRLDGTMSVVARDKAVKDFNTIPEVSVMIMSLK 190 Query: 118 SCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 + GLN+ ++ LWW+ Q I+R + G R V V+ L ++T++ Sbjct: 191 AASLGLNM-VAACRVLLLDLWWNPTTEDQAIDR-----AHRIGQTRPVTVFRLTVKDTVE 244 Query: 178 ELVLQRL 184 + +L Sbjct: 245 DRILALQ 251 >gi|222630854|gb|EEE62986.1| hypothetical protein OsJ_17794 [Oryza sativa Japonica Group] Length = 947 Score = 91.2 bits (225), Expect = 7e-17, Method: Composition-based stats. Identities = 35/198 (17%), Positives = 75/198 (37%), Gaps = 20/198 (10%) Query: 14 DLQGENIEAFNSASKTVKCLQLANGAVYYDEE-KHWKEVHDEKIKALEVIIE--KANAAP 70 +++ + +A +A+ ++L G + H K++ALE ++ Sbjct: 570 EIEKQKKDAELAAAVFDTDIELVGGGAKSENFMGLSDAEHCGKMRALERLLSLWTLQGDK 629 Query: 71 IIVAYHFNSDLARLQK----------AFPQGRTLDKDPCTIQEWNE-GKIPLLFAHPASC 119 I++ + L L+K F ++ I E+N + + Sbjct: 630 ILLFSYSVRMLDILEKFLIRKGYCFSRFDGTTPMNARQLLIDEFNRCPSKQVFLISTRAG 689 Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 G+NL N +V F W+ + Q R + G +R V V+ L+ +++EL Sbjct: 690 NLGVNL-VSANRVVIFDPSWNPAQDLQA-----QDRSFRFGQRRHVTVFRLLGAGSLEEL 743 Query: 180 VLQRLRTKSTIQDLLLNA 197 + R K + ++ ++ Sbjct: 744 IYSRQIYKQQLSNIAVSG 761 >gi|121700957|ref|XP_001268743.1| dsDNA-dependent ATPase (Rad54b), putative [Aspergillus clavatus NRRL 1] gi|119396886|gb|EAW07317.1| dsDNA-dependent ATPase (Rad54b), putative [Aspergillus clavatus NRRL 1] Length = 976 Score = 91.2 bits (225), Expect = 7e-17, Method: Composition-based stats. Identities = 25/104 (24%), Positives = 46/104 (44%), Gaps = 9/104 (8%) Query: 96 KDPCTIQEWN---EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIG 152 K ++++N + G GLNL G + LV F + W+ Q + RI Sbjct: 675 KRQSLVEDFNRLPADLCFAFLLSAKAGGTGLNL-IGASRLVLFDVDWNPATDIQAMARI- 732 Query: 153 VTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + G KR +Y ++ + +++E + QR TK + D ++ Sbjct: 733 ----HRDGQKRHCRIYRILLKGSLEEKIWQRQVTKIGLADSVME 772 >gi|320587549|gb|EFX00030.1| DNA excision repair protein [Grosmannia clavigera kw1407] Length = 1181 Score = 91.2 bits (225), Expect = 7e-17, Method: Composition-based stats. Identities = 26/128 (20%), Positives = 46/128 (35%), Gaps = 17/128 (13%) Query: 72 IVAYHFNSDLARLQKAF----------PQGRTLDKDPCTIQEWNEGK-IPLLFAHPASCG 120 +V F S L+ ++ A ++++ +L + G Sbjct: 1014 VVFSQFTSFLSLIEPALRRDNMAFLRLDGTMAQKARAAVLEDFRRSDRFTVLLISLRAGG 1073 Query: 121 HGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELV 180 GLNL + V WW Q I+R+ + G V VY IA+ +++E + Sbjct: 1074 VGLNLTMAKRVFVM-DPWWSFSVEAQAIDRV-----HRMGQDEEVKVYRFIAKGSVEEKM 1127 Query: 181 LQRLRTKS 188 L+ K Sbjct: 1128 LKIQDRKK 1135 >gi|294659312|ref|XP_461680.2| DEHA2G03102p [Debaryomyces hansenii CBS767] gi|199433866|emb|CAG90128.2| DEHA2G03102p [Debaryomyces hansenii] Length = 1590 Score = 91.2 bits (225), Expect = 7e-17, Method: Composition-based stats. Identities = 43/227 (18%), Positives = 88/227 (38%), Gaps = 35/227 (15%) Query: 2 KQYHKFQRE--LYCDLQGENIEAF---NSASKTVKCLQLANG-AVYYDEEK---HWKEVH 52 K Y + + LY GE + N+ ++ ++ ++ N VY + E E + Sbjct: 950 KLYQQMLKYNILYASKPGEGDKPVLIKNANNQIMQLRKICNHPFVYEEVENLINPASETN 1009 Query: 53 DE------KIKALEVIIEK--ANAAPIIVAYHFNSD---------LARLQKAFPQGRTL- 94 D+ K + L+ ++ K + +++ + L ++ G T Sbjct: 1010 DQIWRVAGKFELLDKVLPKFKNSGHRVLIFFQMTQIMDIMEDFLRLRGMKYMRLDGSTKA 1069 Query: 95 DKDPCTIQEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIG 152 D ++ +N + G GLNLQ + ++ F W+ + Q Sbjct: 1070 DDRTGLLKLFNAPNSDYFCFLLSTRAGGLGLNLQT-ADTVIIFDTDWNPHQDLQA----- 1123 Query: 153 VTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 R + G K V + LI +++++E++L+R K I ++ A K Sbjct: 1124 QDRAHRIGQKNEVRILRLITEDSVEEMILERAHAKLEIDGKVIQAGK 1170 >gi|222618922|gb|EEE55054.1| hypothetical protein OsJ_02753 [Oryza sativa Japonica Group] Length = 755 Score = 91.2 bits (225), Expect = 7e-17, Method: Composition-based stats. Identities = 25/140 (17%), Positives = 50/140 (35%), Gaps = 17/140 (12%) Query: 65 KANAAPIIVAYHFNSDLARLQKA----------FPQGRTLDKDPCTIQEWNEGK-IPLLF 113 K +++ L +++A T K I+ + P+ Sbjct: 491 KEEGHKVLIFSQTRLMLDEIEEALTNKGVHFARMDGTVTASKREAIIKGFQSKDGPPIFL 550 Query: 114 AHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQ 173 G GLNL + ++ W+ Q ++R+ + G ++ V +Y LI Sbjct: 551 MTTKVGGIGLNLTN-ASRVIIADPSWNPSLDNQCVDRV-----YRIGQEKNVIIYRLITS 604 Query: 174 NTIDELVLQRLRTKSTIQDL 193 TI+E + ++ +K I Sbjct: 605 CTIEERIYEKQVSKEGIFKA 624 >gi|195344342|ref|XP_002038747.1| GM10445 [Drosophila sechellia] gi|194133768|gb|EDW55284.1| GM10445 [Drosophila sechellia] Length = 547 Score = 91.2 bits (225), Expect = 7e-17, Method: Composition-based stats. Identities = 33/151 (21%), Positives = 63/151 (41%), Gaps = 18/151 (11%) Query: 56 IKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGR----------TLDKDPCTIQEWN 105 I LE I+ N IIV + S LA ++K T + ++++N Sbjct: 378 IDKLEEILTGTNDK-IIVTSQWVSYLAIIRKRLQDLSWETLDFNGQLTAKEREIVVRDFN 436 Query: 106 -EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA 164 +L + G GLNL ++L+ L W+ + +Q +RI + G + Sbjct: 437 ANNDKRVLLLSLTAGGVGLNLNVANHMLI-VDLHWNPQLERQAQDRI-----YRYGQTKP 490 Query: 165 VFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 F+Y + Q+T+++ + K + ++L Sbjct: 491 TFIYRYMCQDTVEQRIKSLQDCKLEMAKVVL 521 >gi|172036268|ref|YP_001802769.1| hypothetical protein cce_1353 [Cyanothece sp. ATCC 51142] gi|171697722|gb|ACB50703.1| unknown [Cyanothece sp. ATCC 51142] Length = 1046 Score = 91.2 bits (225), Expect = 7e-17, Method: Composition-based stats. Identities = 22/129 (17%), Positives = 49/129 (37%), Gaps = 7/129 (5%) Query: 70 PIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIP-LLFAHPASCGHGLNLQYG 128 ++ Y + + R + + + ++ P + + G GLNL Sbjct: 896 KLLKPYLEKKFAQEVLFLYGATRRIQRQEMIDRFQHDPNGPRIFILSLKAGGTGLNLTR- 954 Query: 129 GNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKS 188 N + WW+ Q +R + G KR V V+ + T++E + + L +K Sbjct: 955 ANHVFHIDRWWNPAVENQATDR-----AFRLGQKRNVQVHKFVCTGTLEERINEMLESKQ 1009 Query: 189 TIQDLLLNA 197 + + +++ Sbjct: 1010 KLAEQTVDS 1018 >gi|115462843|ref|NP_001055021.1| Os05g0247900 [Oryza sativa Japonica Group] gi|54291735|gb|AAV32104.1| uknown protein [Oryza sativa Japonica Group] gi|113578572|dbj|BAF16935.1| Os05g0247900 [Oryza sativa Japonica Group] gi|125551533|gb|EAY97242.1| hypothetical protein OsI_19162 [Oryza sativa Indica Group] gi|215701224|dbj|BAG92648.1| unnamed protein product [Oryza sativa Japonica Group] Length = 856 Score = 91.2 bits (225), Expect = 7e-17, Method: Composition-based stats. Identities = 35/198 (17%), Positives = 75/198 (37%), Gaps = 20/198 (10%) Query: 14 DLQGENIEAFNSASKTVKCLQLANGAVYYDEE-KHWKEVHDEKIKALEVIIE--KANAAP 70 +++ + +A +A+ ++L G + H K++ALE ++ Sbjct: 479 EIEKQKKDAELAAAVFDTDIELVGGGAKSENFMGLSDAEHCGKMRALERLLSLWTLQGDK 538 Query: 71 IIVAYHFNSDLARLQK----------AFPQGRTLDKDPCTIQEWNE-GKIPLLFAHPASC 119 I++ + L L+K F ++ I E+N + + Sbjct: 539 ILLFSYSVRMLDILEKFLIRKGYCFSRFDGTTPMNARQLLIDEFNRCPSKQVFLISTRAG 598 Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 G+NL N +V F W+ + Q R + G +R V V+ L+ +++EL Sbjct: 599 NLGVNL-VSANRVVIFDPSWNPAQDLQA-----QDRSFRFGQRRHVTVFRLLGAGSLEEL 652 Query: 180 VLQRLRTKSTIQDLLLNA 197 + R K + ++ ++ Sbjct: 653 IYSRQIYKQQLSNIAVSG 670 >gi|24644932|ref|NP_524850.2| lodestar [Drosophila melanogaster] gi|30581024|sp|P34739|TTF2_DROME RecName: Full=Transcription termination factor 2; AltName: Full=Protein lodestar; AltName: Full=RNA polymerase II termination factor; AltName: Full=Transcription release factor 2 gi|7298963|gb|AAF54167.1| lodestar [Drosophila melanogaster] Length = 1061 Score = 91.2 bits (225), Expect = 7e-17, Method: Composition-based stats. Identities = 34/166 (20%), Positives = 63/166 (37%), Gaps = 22/166 (13%) Query: 50 EVHDEKIKALEVIIE----KANAAPIIVAYHFNSDLARLQKAFPQGRT----------LD 95 KI + I++ K++ IV + S L L+ + + Sbjct: 886 HRPSSKINMVIQILKTSILKSSDDKAIVVSQWTSVLDILRDHLSKDGVATLSLNGTIPVK 945 Query: 96 KDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGV 153 + E+N+ +L + G GLNL G N L+ L W+ + Q +RI Sbjct: 946 NRQDIVNEFNDRNNQKRVLLLSLTAGGVGLNL-IGANHLLLLDLHWNPQLEAQAQDRI-- 1002 Query: 154 TRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 + G K+ V +Y + +T+++ + K + D +L K Sbjct: 1003 ---YRVGQKKNVIIYKFMCVDTVEQRIKGLQDKKLDLADGVLTGAK 1045 >gi|316974280|gb|EFV57776.1| domain protein, SNF2 family [Trichinella spiralis] Length = 2137 Score = 91.2 bits (225), Expect = 7e-17, Method: Composition-based stats. Identities = 22/145 (15%), Positives = 50/145 (34%), Gaps = 18/145 (12%) Query: 65 KANAAPIIVAYHFNSDLARLQ----------KAFPQGRTLDKDPCTIQEWNEGKIP--LL 112 K +++ L ++ + T I +N P + Sbjct: 1072 KEGGHRVLIFSQMTKMLDLIEDFLEYEGYKYERIDGSVTGSLRQDAIDRFNAPNAPQFVF 1131 Query: 113 FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIA 172 + G G+NL + ++ + W+ Q +R + G R V +Y + Sbjct: 1132 LLSTRAGGLGINL-ATADTVIIYDSDWNPHNDIQA-----FSRAHRIGQNRKVMIYRFVT 1185 Query: 173 QNTIDELVLQRLRTKSTIQDLLLNA 197 +N+++E + + K + L++ A Sbjct: 1186 RNSVEERITTVAKKKMMLTHLVVRA 1210 >gi|256961060|ref|ZP_05565231.1| Snf2 family helicase [Enterococcus faecalis Merz96] gi|293384550|ref|ZP_06630416.1| Snf2 family protein [Enterococcus faecalis R712] gi|293386779|ref|ZP_06631350.1| Snf2 family protein [Enterococcus faecalis S613] gi|312906376|ref|ZP_07765384.1| protein, SNF2 family [Enterococcus faecalis DAPTO 512] gi|312979465|ref|ZP_07791153.1| SNF2 family N-terminal domain protein [Enterococcus faecalis DAPTO 516] gi|256951556|gb|EEU68188.1| Snf2 family helicase [Enterococcus faecalis Merz96] gi|291078096|gb|EFE15460.1| Snf2 family protein [Enterococcus faecalis R712] gi|291083782|gb|EFE20745.1| Snf2 family protein [Enterococcus faecalis S613] gi|310627530|gb|EFQ10813.1| protein, SNF2 family [Enterococcus faecalis DAPTO 512] gi|311287836|gb|EFQ66392.1| SNF2 family N-terminal domain protein [Enterococcus faecalis DAPTO 516] Length = 1016 Score = 91.2 bits (225), Expect = 7e-17, Method: Composition-based stats. Identities = 30/152 (19%), Positives = 62/152 (40%), Gaps = 21/152 (13%) Query: 24 NSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDL 81 + + + Q+ + E+ K++ ++ + A N +++ F S L Sbjct: 868 SILAGLTRLRQICCDPRLFIEDYT---GGSGKVEQVKDFLVAAKENNRRVLLFSQFTSML 924 Query: 82 ARLQKA---------FPQGRTLDKDPCTIQE-WNEGKIPLLFAHPASCGHGLNLQYGGNI 131 + L+K + +G T +D T+ +NEG+ + + G GLNL G + Sbjct: 925 SILEKELNELGLETFYLRGSTKPQDRLTMANAFNEGEKDVFLISLKAGGTGLNLT-GADT 983 Query: 132 LVFFSLWWDLEEHQQMIERIGVTRQRQAGFKR 163 ++ + LWW+ +Q R + G K+ Sbjct: 984 VILYDLWWNPAVEEQAAGR-----AHRMGQKK 1010 >gi|15230608|ref|NP_187252.1| ATCHR12; ATP binding / DNA binding / helicase/ nucleic acid binding [Arabidopsis thaliana] gi|6671969|gb|AAF23228.1|AC013454_15 putative transcriptional regulator [Arabidopsis thaliana] Length = 1132 Score = 91.2 bits (225), Expect = 7e-17, Method: Composition-based stats. Identities = 43/217 (19%), Positives = 90/217 (41%), Gaps = 27/217 (12%) Query: 2 KQYHKFQREL-YCDLQGENIEAFNSASKTVKCLQLAN------GAVYYDEEKHWKEVHDE 54 K Y+K ++ LQ + ++ + + T++ + N G Y +K Sbjct: 684 KVYYKQVTDMGRVGLQTGSGKSKSLQNLTMQLRKCCNHPYLFVGGDYNMWKKPEIVRASG 743 Query: 55 KIKALEVIIEKA--NAAPIIVAYHFNSDLARL---------QKAFPQGRTL-DKDPCTIQ 102 K + L+ ++ K I++ + L + G T D+ ++ Sbjct: 744 KFELLDRLLPKLRKAGHRILLFSQMTRLIDVLEIYLTLNDYKYLRLDGTTKTDQRGLLLK 803 Query: 103 EWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 ++NE P + + G GLNLQ + ++ F W+ + QQ +R + G Sbjct: 804 QFNEPDSPYFMFLLSTRAGGLGLNLQT-ADTVIIFDSDWNPQMDQQAEDR-----AHRIG 857 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 K+ V V+ L++ +++E++L+R + K I ++ A Sbjct: 858 QKKEVRVFVLVSVGSVEEVILERAKQKMGIDAKVIQA 894 >gi|1345773|sp|P40201|CHD1_MOUSE RecName: Full=Chromodomain-helicase-DNA-binding protein 1; Short=CHD-1; AltName: Full=ATP-dependent helicase CHD1 gi|455015|gb|AAB08486.1| DNA-binding protein [Mus musculus] Length = 1711 Score = 91.2 bits (225), Expect = 7e-17, Method: Composition-based stats. Identities = 27/153 (17%), Positives = 56/153 (36%), Gaps = 21/153 (13%) Query: 68 AAPIIVAYHFNSDLARLQKAFP---------QGRTLDK-DPCTIQEWN-EGKIPL-LFAH 115 +++ L L + G + + +N EG Sbjct: 802 GNRVLIFSQMVRMLDILAEYLKYRQFPFQRLDGSIKGELRKQALDHFNAEGSEDFCFLLS 861 Query: 116 PASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNT 175 + G G+NL + +V F W+ + Q R + G K+ V +Y L+ + + Sbjct: 862 TRAGGLGINL-ASADTVVIFDSDWNPQNDLQAQAR-----AHRIGQKKQVNIYRLVTKGS 915 Query: 176 IDELVLQRLRTKSTIQDLL---LNALKKETIHV 205 ++E +L+R + K + L+ ++ K +H Sbjct: 916 VEEDILERAKKKMVLDHLVIQRMDTTGKTVLHT 948 >gi|329935238|ref|ZP_08285204.1| bifunctional protein [Streptomyces griseoaurantiacus M045] gi|329305061|gb|EGG48920.1| bifunctional protein [Streptomyces griseoaurantiacus M045] Length = 726 Score = 91.2 bits (225), Expect = 7e-17, Method: Composition-based stats. Identities = 40/197 (20%), Positives = 73/197 (37%), Gaps = 30/197 (15%) Query: 14 DLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKA--NAAPI 71 +L + EA+ A + + + A Y EK K+ L I+E+A N Sbjct: 497 ELSAADEEAYREAVRAGNFMAMRRAA-YARPEK------SAKLGRLREIVEEAGENGQRT 549 Query: 72 IVAYHFNSDLARLQKAFP--------------QGRTLDKDPCTIQEWNEGKIP-LLFAHP 116 +V +F L ++ A + + ++ P +L A Sbjct: 550 VVFSYFRDVLDVVRDALTARPGGGAPVFGPLTGSVPPGRRQRIVDDFAATPGPAVLLAQI 609 Query: 117 ASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTI 176 + G GLN+Q +++V Q + R + G R V V+ L+A + Sbjct: 610 QAAGVGLNMQ-AASVVVLCEPQIKPTLEHQAVAR-----AHRMGQVRPVGVHRLLATGGV 663 Query: 177 DELVLQRLRTKSTIQDL 193 DE +++ L K+ + D Sbjct: 664 DERLVRMLERKTRLFDA 680 >gi|238484689|ref|XP_002373583.1| SNF2 family helicase/ATPase, putative [Aspergillus flavus NRRL3357] gi|220701633|gb|EED57971.1| SNF2 family helicase/ATPase, putative [Aspergillus flavus NRRL3357] Length = 1126 Score = 91.2 bits (225), Expect = 7e-17, Method: Composition-based stats. Identities = 35/162 (21%), Positives = 66/162 (40%), Gaps = 19/162 (11%) Query: 46 KHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFP---------QGRTL 94 K+ + + KI L ++++ N ++ F + L+ GRT Sbjct: 936 KNNEWMDSGKIDKLCELLKRFKENGDRTLIFSQFTMVMDILEHVLENQHLGFVRLDGRTN 995 Query: 95 DKDPCTI-QEWNEG-KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIG 152 +D +I ++E IP+ + G G+NL N +V F ++ +E Q Sbjct: 996 VEDRQSILDAFHERTDIPVFLLSTKAGGAGINL-ACANKVVIFDSSFNPQEDVQA----- 1049 Query: 153 VTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 R + G R V V L+ ++TI+E + +TK + + Sbjct: 1050 ENRAHRVGQTREVEVIRLVTKDTIEEQIYALGQTKLALDQAV 1091 >gi|71004558|ref|XP_756945.1| hypothetical protein UM00798.1 [Ustilago maydis 521] gi|74704333|sp|Q4PGG5|RAD5_USTMA RecName: Full=DNA repair protein RAD5 gi|46095546|gb|EAK80779.1| hypothetical protein UM00798.1 [Ustilago maydis 521] Length = 1387 Score = 91.2 bits (225), Expect = 7e-17, Method: Composition-based stats. Identities = 30/157 (19%), Positives = 55/157 (35%), Gaps = 24/157 (15%) Query: 52 HDEKIKALEVIIEKANAA----PIIVAYHFNSDLARL-----QKAFPQGRTLDKDPCTIQ 102 K+ AL + A ++ F S L + + F R P ++ Sbjct: 1207 TSTKLSALISHLNTLRATEAAFKGVIFSQFTSFLDLIEPVLTRYRFHFLRLDGSTPQKVR 1266 Query: 103 E-----WNEGK----IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGV 153 + + + L + G GLNL N + WW+ Q I+RI Sbjct: 1267 DKLVLEFQSPSPTNHVVLFLISLKAGGVGLNLT-AANKIWLLDFWWNSSIENQAIDRI-- 1323 Query: 154 TRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 + G V V+ I +++I++ +L + K + Sbjct: 1324 ---HRFGQTSPVSVFRYIIKDSIEDRILLIQKRKDML 1357 >gi|321255221|ref|XP_003193350.1| SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 3 [Cryptococcus gattii WM276] gi|317459820|gb|ADV21563.1| SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 3, putative [Cryptococcus gattii WM276] Length = 899 Score = 91.2 bits (225), Expect = 8e-17, Method: Composition-based stats. Identities = 42/171 (24%), Positives = 64/171 (37%), Gaps = 28/171 (16%) Query: 40 VYYDEEKHWKEVHDEKIKALEVIIE--KANAAPIIVAYHFNSDLA----RLQKAFPQGRT 93 VY + ++ KI L + N +V F S L RL++ + Sbjct: 706 VYI-PSSQARSINSAKIDELVKYLRIFPRNDK-TLVFSQFTSFLDCVGVRLEEEGIKFVR 763 Query: 94 LD------KDPCTIQEWNEG-------KIP-LLFAHPASCGHGLNLQYGGNILVFFSLWW 139 D + I+ + E K P ++ S GLNL N + WW Sbjct: 764 FDGRMSGKQRTAVIKTFQEPVKGDDDEKTPKVMLISLKSGAVGLNLTAASN-VFLCDPWW 822 Query: 140 DLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 Q IE + R + G K+ V V+ LIA+NTI+ VL + K + Sbjct: 823 -----QSAIEAQAIDRAHRMGQKKIVRVFQLIAENTIESSVLDIQKRKDAM 868 >gi|224145438|ref|XP_002325643.1| chromatin remodeling complex subunit [Populus trichocarpa] gi|222862518|gb|EEF00025.1| chromatin remodeling complex subunit [Populus trichocarpa] Length = 719 Score = 91.2 bits (225), Expect = 8e-17, Method: Composition-based stats. Identities = 29/178 (16%), Positives = 68/178 (38%), Gaps = 20/178 (11%) Query: 32 CLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANA--APIIVAYHFNSDLARLQKAFP 89 L+ A Y+ K + L+ ++ + A +++ + L + F Sbjct: 452 LLESAFDGSYFYPPVEQIVGKCGKFQLLDRLLNRLFALQHKVLIFSQWTKILDIMDYYFS 511 Query: 90 Q----------GRTLDKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSL 137 + LD+ IQE+N+ + + G G+NL + + + Sbjct: 512 EKGFEVCRIDGSVKLDERKKQIQEFNDENSQFRIFLLSTRAGGLGINLT-SADTCILYDS 570 Query: 138 WWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 W+ + Q ++R + G + V VY L +++ +L+R +K ++ +++ Sbjct: 571 DWNPQMDLQAMDRC-----HRIGQTKPVHVYRLTTAQSVEGRILKRAFSKLKLEHVVI 623 >gi|157818785|ref|NP_001100935.1| chromodomain helicase DNA binding protein 1 [Rattus norvegicus] gi|149047090|gb|EDL99810.1| chromodomain helicase DNA binding protein 1 (predicted) [Rattus norvegicus] Length = 1711 Score = 91.2 bits (225), Expect = 8e-17, Method: Composition-based stats. Identities = 27/153 (17%), Positives = 56/153 (36%), Gaps = 21/153 (13%) Query: 68 AAPIIVAYHFNSDLARLQKAFP---------QGRTLDK-DPCTIQEWN-EGKIPL-LFAH 115 +++ L L + G + + +N EG Sbjct: 802 GNRVLIFSQMVRMLDILAEYLKYRQFPFQRLDGSIKGELRRQALDHFNAEGSEDFCFLLS 861 Query: 116 PASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNT 175 + G G+NL + +V F W+ + Q R + G K+ V +Y L+ + + Sbjct: 862 TRAGGLGINL-ASADTVVIFDSDWNPQNDLQAQAR-----AHRIGQKKQVNIYRLVTKGS 915 Query: 176 IDELVLQRLRTKSTIQDLL---LNALKKETIHV 205 ++E +L+R + K + L+ ++ K +H Sbjct: 916 VEEDILERAKKKMVLDHLVIQRMDTTGKTVLHT 948 >gi|154299240|ref|XP_001550040.1| hypothetical protein BC1G_11798 [Botryotinia fuckeliana B05.10] gi|150857501|gb|EDN32693.1| hypothetical protein BC1G_11798 [Botryotinia fuckeliana B05.10] Length = 1433 Score = 91.2 bits (225), Expect = 8e-17, Method: Composition-based stats. Identities = 38/225 (16%), Positives = 85/225 (37%), Gaps = 33/225 (14%) Query: 2 KQYHKF---QRELYCDLQGENIEAFNSASKTVKCLQLANG-AVYYDEEKHWKEV------ 51 + Y + + + D +G A ++ ++ +L N V+ + E Sbjct: 796 RLYKQMVTHNKLVVSDGKGGKTGARGLSNMIMQLRKLCNHPFVFREVEDQMNPTGYINDS 855 Query: 52 ---HDEKIKALEVIIE--KANAAPIIVAYHFNS---------DLARLQKAFPQGRTL-DK 96 K + L+ I+ +A +++ + + D ++ G T D Sbjct: 856 LWRSAGKFELLDRILPKYQATGHRVLMFFQMTAIMDIMGEFLDYRGIKFMRLDGTTKSDD 915 Query: 97 DPCTIQEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 ++E+N + + G GLNLQ + ++ + W+ + Q Sbjct: 916 RSLLLKEFNAPNSEYFCFLLSTRAGGLGLNLQT-ADTVIIYDSDWNPHQDLQA-----QD 969 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 R + G K V + LI+ N+++E +L+R + K + ++ A + Sbjct: 970 RAHRIGQKNEVRILRLISSNSVEEKILERAKFKLDMDGKVIQAGR 1014 >gi|84995999|ref|XP_952721.1| DNA repair helicase [Theileria annulata strain Ankara] gi|65303718|emb|CAI76095.1| DNA repair helicase, putative [Theileria annulata] Length = 965 Score = 91.2 bits (225), Expect = 8e-17, Method: Composition-based stats. Identities = 35/168 (20%), Positives = 61/168 (36%), Gaps = 25/168 (14%) Query: 46 KHWKEVHDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDP----- 98 + + K+ IIE K I++ + L + + DKD Sbjct: 631 RRIESAGSSKLNVSLKIIEMWKKENKKILLFTQTTTMLNIIYDHLLE--IYDKDEILILF 688 Query: 99 ---------CTIQEW-NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMI 148 I+ + + K+ ++ G GLNL I++ + W+ Q Sbjct: 689 GKHTVSNRNKIIERFSTDDKVFIMILTTKVGGIGLNLTAATRIII-YDPDWNPMTDMQAK 747 Query: 149 ERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 ER + G K V +Y LI +TI+E + QR K + +L+ Sbjct: 748 ERC-----YRIGQKNEVIIYRLITASTIEEKIYQRQLYKYYLSQQILS 790 >gi|156554795|ref|XP_001606060.1| PREDICTED: similar to helicase [Nasonia vitripennis] Length = 1053 Score = 91.2 bits (225), Expect = 8e-17, Method: Composition-based stats. Identities = 30/160 (18%), Positives = 63/160 (39%), Gaps = 21/160 (13%) Query: 53 DEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQ-----------KAFPQGRTLDKDPC 99 K++A+ ++ +I+ + L + + F + Sbjct: 884 SSKVRAVLDVVNSVLEKGEKVIIVSQWTKFLDIIASNLCLMEGAYFEMFTGKVAVKNRQE 943 Query: 100 TIQEWNE--GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 + N+ K+ +L + G GLNL G N L+ L W+ + Q ++R+ Sbjct: 944 IVDRLNDSDNKLNVLLLSLTAGGVGLNL-VGANNLLLIDLHWNPQLETQAMDRL-----Y 997 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + G + V +Y + ++TI+E V + K I + +L+ Sbjct: 998 RFGQENNVHIYKFVCRDTIEEKVKKLQDMKLAIANNVLSG 1037 >gi|109131186|ref|XP_001092609.1| PREDICTED: DNA excision repair protein ERCC-6-like isoform 2 [Macaca mulatta] Length = 1252 Score = 91.2 bits (225), Expect = 8e-17, Method: Composition-based stats. Identities = 27/152 (17%), Positives = 53/152 (34%), Gaps = 20/152 (13%) Query: 53 DEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQK-----AFPQGRT-------LDKDP 98 K+ L ++++ +V L +++ F R L+++ Sbjct: 459 SGKMIFLMDLLKRLRDEGHQTLVFSQSRQILNIIERLLKNRHFKTLRIDGTITHLLEREK 518 Query: 99 CTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQ 158 + G GL L +V F W+ Q ++R+ + Sbjct: 519 RINLFQQNKDYSVFLLTTQVGGVGLTLT-AATRVVIFDPSWNPATDAQAVDRV-----YR 572 Query: 159 AGFKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 G K+ V VY LI T++E + +R K ++ Sbjct: 573 IGQKQNVVVYRLITCGTVEEKIYRRQVFKDSL 604 >gi|297710314|ref|XP_002831842.1| PREDICTED: DNA excision repair protein ERCC-6-like [Pongo abelii] Length = 1250 Score = 91.2 bits (225), Expect = 8e-17, Method: Composition-based stats. Identities = 27/152 (17%), Positives = 52/152 (34%), Gaps = 20/152 (13%) Query: 53 DEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQK-----AFPQGRT-------LDKDP 98 K+ L ++++ +V L +++ F R L+++ Sbjct: 459 SGKMIFLMDLLKRLRDEGHQTLVFSQSRQILNIIERLLKNRHFKTLRIDGTVTHLLEREK 518 Query: 99 CTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQ 158 + G GL L +V F W+ Q ++R+ + Sbjct: 519 RINLFQQNKDYSVFLLTTQVGGVGLTLT-AATRVVIFDPSWNPATDAQAVDRV-----YR 572 Query: 159 AGFKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 G K V VY LI T++E + +R K ++ Sbjct: 573 IGQKENVVVYRLITCGTVEEKIYRRQVFKDSL 604 >gi|167518399|ref|XP_001743540.1| hypothetical protein [Monosiga brevicollis MX1] gi|163778639|gb|EDQ92254.1| predicted protein [Monosiga brevicollis MX1] Length = 546 Score = 91.2 bits (225), Expect = 8e-17, Method: Composition-based stats. Identities = 34/164 (20%), Positives = 69/164 (42%), Gaps = 20/164 (12%) Query: 55 KIKALEVII--EKANAAPIIVAYHFNSDLARLQKAF---------PQGRTLDKDPCT-IQ 102 K+K LE ++ ++A+ A +++ F + L L+ G T + I Sbjct: 373 KLKVLEHLLAQKQADEARVLIFSQFTTMLDILEDFLTRRGYVFIRLDGSTPVSERQDLID 432 Query: 103 EWNEGK-IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGF 161 ++NE + I + + G G+NL N +V + ++ +Q +R + G Sbjct: 433 QFNEDEEIFVFLLSTRAGGLGINLT-AANTVVLHDIDFNPYNDKQAEDRC-----HRVGQ 486 Query: 162 KRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIHV 205 V + LIA T++ + + K ++ + LKK+ H+ Sbjct: 487 TDNVEIVRLIADETVEVDMQAKAEAKLQLERD-MTGLKKDDAHI 529 >gi|323451192|gb|EGB07070.1| hypothetical protein AURANDRAFT_28341 [Aureococcus anophagefferens] Length = 396 Score = 91.2 bits (225), Expect = 8e-17, Method: Composition-based stats. Identities = 32/228 (14%), Positives = 71/228 (31%), Gaps = 40/228 (17%) Query: 2 KQYHKFQRELYCDLQGE--NIEAFNSASKTVKCLQLANGAVYY--------DEEKHWKEV 51 + Y + L G ++ + + ++ + N + H Sbjct: 177 RYYRALYEKNVTMLAGGGRAVDGPSMMNLAMELRKCCNHPFLLKGVEFRELESSGHGVAE 236 Query: 52 HDEKIKA----------LEVIIEKANAAPIIVAYHFNSDLARLQ----------KAFPQG 91 D + A L + ++ ++V F L L+ G Sbjct: 237 VDRLVDACGKLQFMDKILPKLFDEQ--RKVLVFSQFTMMLNVLEDYLRARAVVYGRIDGG 294 Query: 92 RTLDKDPCTIQEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIE 149 T I +++ K+ L+ + G G+NL + ++ + W+ + Q + Sbjct: 295 VTGRDRQRQIDAFSDAGSKMRLMLLSTRAGGVGINL-VAADTVIIYDSDWNPQNDVQAMA 353 Query: 150 RIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 R + G + V VY L+ T + + K + +L+ Sbjct: 354 RC-----HRIGQTKKVTVYRLLTAKTYEAHMYDVATAKLDLDRAVLDG 396 >gi|302834898|ref|XP_002949011.1| hypothetical protein VOLCADRAFT_43161 [Volvox carteri f. nagariensis] gi|300265756|gb|EFJ49946.1| hypothetical protein VOLCADRAFT_43161 [Volvox carteri f. nagariensis] Length = 347 Score = 91.2 bits (225), Expect = 8e-17, Method: Composition-based stats. Identities = 28/143 (19%), Positives = 57/143 (39%), Gaps = 18/143 (12%) Query: 65 KANAAPIIVAYHFNSDLARLQKAFP---------QGRTLDKD-PCTIQEWNEGKIP--LL 112 A +++ L +++ G T +D P + +N P + Sbjct: 211 AATGHRVLLFSQMTRALDLVEEFLELRGLPYLRLDGSTRTEDRPQLLTAFNSPNSPYRVF 270 Query: 113 FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIA 172 + G GLNLQ + ++ W+ QQ +R + G R+V V L++ Sbjct: 271 LLSTRAGGMGLNLQ-SADTVIMLDSDWNPAMDQQAEDR-----AHRLGQTRSVLVLVLVS 324 Query: 173 QNTIDELVLQRLRTKSTIQDLLL 195 T++E++L+R K + + ++ Sbjct: 325 CRTLEEVMLERAGAKRGLGEAVI 347 >gi|260827933|ref|XP_002608918.1| hypothetical protein BRAFLDRAFT_85517 [Branchiostoma floridae] gi|229294272|gb|EEN64928.1| hypothetical protein BRAFLDRAFT_85517 [Branchiostoma floridae] Length = 460 Score = 91.2 bits (225), Expect = 8e-17, Method: Composition-based stats. Identities = 27/143 (18%), Positives = 55/143 (38%), Gaps = 18/143 (12%) Query: 67 NAAPIIVAYHFNSDLARLQKAFPQ----------GRTLDKDPCTIQEWN-EGKIP-LLFA 114 N ++ + L + + Q G + ++++N K P +L Sbjct: 305 NPVKSVIVSQWTKMLDVIGRHLEQAGYRYVVIKGGVPPRQRMEAVEQFNRNPKGPEVLLV 364 Query: 115 HPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQN 174 + G GLNL GG+ L + W+ Q +RI + G K V ++ + ++ Sbjct: 365 SLQAGGVGLNL-IGGSHLFLLDMHWNPALEDQASDRI-----YRVGQKNDVVIHKFVCKD 418 Query: 175 TIDELVLQRLRTKSTIQDLLLNA 197 T++E + K + +L+ Sbjct: 419 TVEEKIKDLQNAKKNLAQGVLSG 441 >gi|257095431|ref|YP_003169072.1| Non-specific serine/threonine protein kinase [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] gi|257047955|gb|ACV37143.1| Non-specific serine/threonine protein kinase [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] Length = 842 Score = 91.2 bits (225), Expect = 8e-17, Method: Composition-based stats. Identities = 42/178 (23%), Positives = 70/178 (39%), Gaps = 16/178 (8%) Query: 36 ANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHF--NSDL--ARLQKA---- 87 N + D + DE I L+ I A ++V + +L RL Sbjct: 515 CNSSFLLDHQTDDGFKADELIALLDDIFSDPQAK-VVVFSQWLRTHELIIRRLAGRDWQH 573 Query: 88 --FPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQ 145 F G DK + +N +F + G GLNLQ+ ++V L W+ + Sbjct: 574 VLFHGGVPGDKRGALVDRFNNDPACRVFLSTDAGGVGLNLQHAAAVVVNMDLPWNPAVLE 633 Query: 146 QMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETI 203 Q I R+ + G R V V +A+ TI+E +L L K ++ +L+ + + Sbjct: 634 QRIGRV-----HRLGQTRGVQVINFVARGTIEEGMLSVLAFKQSLFAGVLDGGDSDIV 686 >gi|121712768|ref|XP_001273995.1| SNF2 family helicase, putative [Aspergillus clavatus NRRL 1] gi|119402148|gb|EAW12569.1| SNF2 family helicase, putative [Aspergillus clavatus NRRL 1] Length = 953 Score = 91.2 bits (225), Expect = 8e-17, Method: Composition-based stats. Identities = 48/200 (24%), Positives = 78/200 (39%), Gaps = 24/200 (12%) Query: 5 HKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIE 64 +R+ C L +I+ N+A+ L A D+ KI+AL I+ Sbjct: 737 QVIERQHKCPLCRADIK--NTATLVAPAAALGESA--DDDIVADPNNPSSKIEALIKILT 792 Query: 65 K---ANAAPIIVAYHFNSDLA----RLQKAFPQGRTLD-------KDPCTIQEWNEGKIP 110 A +V + S L LQ+ +D +D T + N+ Sbjct: 793 AQGQALGTKTVVFSQWTSFLNLVEPHLQRHRISFVRIDGSMSSTARDSSTYKFSNDPGCK 852 Query: 111 LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYL 170 +L A + C GLNL N + WW Q ++R+ + G KR V+ L Sbjct: 853 VLLASLSVCSVGLNL-VAANQAILADSWWAPTIEDQAVDRV-----YRLGQKRETTVWRL 906 Query: 171 IAQNTIDELVLQRLRTKSTI 190 + +NTI++ VL+ TK + Sbjct: 907 VMENTIEDRVLEIQDTKRKL 926 >gi|254586199|ref|XP_002498667.1| ZYRO0G15796p [Zygosaccharomyces rouxii] gi|238941561|emb|CAR29734.1| ZYRO0G15796p [Zygosaccharomyces rouxii] Length = 1651 Score = 91.2 bits (225), Expect = 8e-17, Method: Composition-based stats. Identities = 32/159 (20%), Positives = 65/159 (40%), Gaps = 20/159 (12%) Query: 55 KIKALEVIIEK--ANAAPIIVAYHFNSDLAR---------LQKAFPQGRTL-DKDPCTIQ 102 K++ LE ++ K A +++ + + ++ G T D+ + Sbjct: 1039 KLELLERVLPKLKATGHRVLIFFQMTQIMDIMEDFLRYIDIKYLRLDGHTKSDERSELLS 1098 Query: 103 EWNEGK--IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 +N+ + + G GLNLQ + ++ F W+ + Q R + G Sbjct: 1099 LFNDEEAGYFCFILSTRAGGLGLNLQT-ADTVIIFDTDWNPHQDLQA-----QDRAHRIG 1152 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 K V + LI QN+++E++L++ K I ++ A K Sbjct: 1153 QKNEVKILRLITQNSVEEVILEKAHKKLDIDGKVIQAGK 1191 >gi|114658987|ref|XP_001170658.1| PREDICTED: chromodomain helicase DNA binding protein 2 isoform 3 [Pan troglodytes] Length = 1603 Score = 91.2 bits (225), Expect = 8e-17, Method: Composition-based stats. Identities = 25/161 (15%), Positives = 59/161 (36%), Gaps = 20/161 (12%) Query: 52 HDEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQKAF---------PQGRTLDK-DPC 99 K+ L+ ++ + +++ L L + G + Sbjct: 789 SSGKLILLDKLLTRLRERGNRVLIFSQMVRMLDILAEYLTIKHYPFQRLDGSIKGEIRKQ 848 Query: 100 TIQEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 + +N + + G G+NL + +V F W+ + Q R Sbjct: 849 ALDHFNADGSEDFCFLLSTRAGGLGINL-ASADTVVIFDSDWNPQNDLQAQAR-----AH 902 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNAL 198 + G K+ V +Y L+ + T++E +++R + K + L++ + Sbjct: 903 RIGQKKQVNIYRLVTKGTVEEEIIERAKKKMVLDHLVIQRM 943 >gi|15240074|ref|NP_201476.1| CHR1 (CHROMATIN REMODELING 1); ATPase/ helicase [Arabidopsis thaliana] gi|75338558|sp|Q9XFH4|DDM1_ARATH RecName: Full=ATP-dependent DNA helicase DDM1; AltName: Full=Protein CHROMATIN REMODELING 1; Short=CHR01; AltName: Full=Protein DECREASED DNA METHYLATION 1; Short=AtDDM1; AltName: Full=Protein SOMNIFEROUS 1; AltName: Full=SWI/SNF2-related matrix-associated actin-dependent regulator of chromatin DDM1 gi|4726079|gb|AAD28303.1|AF143940_1 SWI2/SNF2-like protein [Arabidopsis thaliana] gi|8843733|dbj|BAA97281.1| SWI2/SNF2-like protein [Arabidopsis thaliana] gi|20466344|gb|AAM20489.1| SWI2/SNF2-like protein [Arabidopsis thaliana] gi|25084090|gb|AAN72172.1| SWI2/SNF2-like protein [Arabidopsis thaliana] gi|332010876|gb|AED98259.1| chromatin remodeling 1 [Arabidopsis thaliana] Length = 764 Score = 91.2 bits (225), Expect = 8e-17, Method: Composition-based stats. Identities = 25/142 (17%), Positives = 58/142 (40%), Gaps = 18/142 (12%) Query: 66 ANAAPIIVAYHFNSDLARLQKAFPQ----------GRTLDKDPCTIQEWNEGK--IPLLF 113 AN +++ + L + F + LD+ I+++++ K + Sbjct: 538 ANNHKVLIFSQWTKLLDIMDYYFSEKGFEVCRIDGSVKLDERRRQIKDFSDEKSSCSIFL 597 Query: 114 AHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQ 173 + G G+NL + + + W+ + Q ++R + G + V VY L Sbjct: 598 LSTRAGGLGINLT-AADTCILYDSDWNPQMDLQAMDRC-----HRIGQTKPVHVYRLSTA 651 Query: 174 NTIDELVLQRLRTKSTIQDLLL 195 +I+ VL+R +K ++ +++ Sbjct: 652 QSIETRVLKRAYSKLKLEHVVI 673 >gi|261326898|emb|CBH09871.1| transcription activator, putative [Trypanosoma brucei gambiense DAL972] Length = 948 Score = 91.2 bits (225), Expect = 8e-17, Method: Composition-based stats. Identities = 26/174 (14%), Positives = 62/174 (35%), Gaps = 20/174 (11%) Query: 38 GAVYYDEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQ---------- 85 A ++ K+ L+ ++ + N ++ +F L LQ Sbjct: 506 SACGISLDERSIIAPSGKMIELDRMLREFHMNGHRCLIFSNFTCVLDLLQGLCILRDYSH 565 Query: 86 KAFPQGRTLDKDPCTIQEWN--EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEE 143 + + ++ +N K+ + S G G+ L G +I++ F Sbjct: 566 ERIDGSAQRVERELSMARFNGPASKVFVFLISTMSGGVGITLT-GADIVILFD-----AN 619 Query: 144 HQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 ++R R + G R V V+ L + T++E + + ++ + +++ Sbjct: 620 FNPQMDRQAADRAHRIGQTRTVRVFRLCCKETVEERIQDIALRRLSLGEFVVDG 673 >gi|156046805|ref|XP_001589764.1| hypothetical protein SS1G_09486 [Sclerotinia sclerotiorum 1980] gi|154693881|gb|EDN93619.1| hypothetical protein SS1G_09486 [Sclerotinia sclerotiorum 1980 UF-70] Length = 1054 Score = 91.2 bits (225), Expect = 8e-17, Method: Composition-based stats. Identities = 34/167 (20%), Positives = 63/167 (37%), Gaps = 18/167 (10%) Query: 42 YDEEKHWKEVHDEKIKALEVII-EKANAAPIIVAYHFNSDLARL-----QKAFPQGRTLD 95 +E + + KI L I+ ++A IV F S L + QK F R Sbjct: 805 DEEAELSRVAASTKITHLMKILGKEAAQHKFIVFSQFTSMLDLVEPFLRQKGFKYTRYDG 864 Query: 96 KDPCTIQE------WNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIE 149 ++E N+ +L GLNL +++ +W+ +Q I+ Sbjct: 865 GMKNDLREASLDRLRNDENCRVLLCSLKCGSLGLNLTAATRVVIL-EPFWNPFVEEQAID 923 Query: 150 RIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 R+ + K V VY + ++T++E +L K + + + Sbjct: 924 RV-----HRLTQKIDVVVYKITIKDTVEERILLLQEKKRELANQTIE 965 >gi|72386767|ref|XP_843808.1| transcription activator [Trypanosoma brucei TREU927] gi|62359823|gb|AAX80252.1| transcription activator, putative [Trypanosoma brucei] gi|70800340|gb|AAZ10249.1| transcription activator, putative [Trypanosoma brucei brucei strain 927/4 GUTat10.1] Length = 948 Score = 91.2 bits (225), Expect = 8e-17, Method: Composition-based stats. Identities = 26/174 (14%), Positives = 62/174 (35%), Gaps = 20/174 (11%) Query: 38 GAVYYDEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQ---------- 85 A ++ K+ L+ ++ + N ++ +F L LQ Sbjct: 506 SACGISLDERSIIAPSGKMIELDRMLREFHMNGHRCLIFSNFTCVLDLLQGLCILRDYSH 565 Query: 86 KAFPQGRTLDKDPCTIQEWN--EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEE 143 + + ++ +N K+ + S G G+ L G +I++ F Sbjct: 566 ERIDGSAQRVERELSMARFNGPASKVFVFLISTMSGGVGITLT-GADIVILFD-----AN 619 Query: 144 HQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 ++R R + G R V V+ L + T++E + + ++ + +++ Sbjct: 620 FNPQMDRQAADRAHRIGQTRTVRVFRLCCKETVEERIQDIALRRLSLGEFVVDG 673 >gi|328786333|ref|XP_001120496.2| PREDICTED: chromodomain-helicase-DNA-binding protein 1 [Apis mellifera] Length = 1667 Score = 91.2 bits (225), Expect = 8e-17, Method: Composition-based stats. Identities = 38/224 (16%), Positives = 82/224 (36%), Gaps = 42/224 (18%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEV 61 K Y+ ++ ++G + N + KC N A ++ ++ ++E L+ Sbjct: 602 KNYNALRKG----VKGSTMTFLNIVIELKKC---CNHAFLTKPTENERKDNNE--DYLQQ 652 Query: 62 IIEKAN---------------AAPIIVAYHFNSDLARL-----QKAFPQGRTLDK----- 96 +I + +++ L L +K FP R Sbjct: 653 LIRGSGKLVLLDKLLVRLRETGHRVLIFSQMVRMLDILGEYLQKKHFPFQRLDGSIKGEL 712 Query: 97 DPCTIQEWN-EGKIPL-LFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 + +N EG + G G+NL + ++ F W+ + Q R Sbjct: 713 RKQALDHFNAEGSQDFCFLLSTRAGGLGINL-ATADTVIIFDSDWNPQNDLQAQAR---- 767 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNAL 198 + G K V +Y L+ +N+++E +++R + K + L++ + Sbjct: 768 -AHRIGQKNQVNIYRLVTKNSVEEEIVERAKQKMVLDHLVIQRM 810 >gi|322711118|gb|EFZ02692.1| SNF2 family helicase/ATPase, putative [Metarhizium anisopliae ARSEF 23] Length = 1235 Score = 91.2 bits (225), Expect = 8e-17, Method: Composition-based stats. Identities = 29/175 (16%), Positives = 63/175 (36%), Gaps = 19/175 (10%) Query: 44 EEKHWKEVHDEKI-KALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQG----------- 91 K + + KI + +++ +A IV F S L ++ + Sbjct: 1012 SGKQTQVLASAKIREVTKILHAEAEEHKFIVFSQFTSMLDLVEPFLDKDGFEYARYDGSM 1071 Query: 92 RTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERI 151 + D++ + + +L GLNL ++ +W+ +Q I+R+ Sbjct: 1072 KNDDREESLRRLREDQSTRVLLCSLKCGSLGLNLT-AATRVIIVEPFWNPFVEEQAIDRV 1130 Query: 152 GVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN-ALKKETIHV 205 + V VY L +T++E ++ K + + + KKE + + Sbjct: 1131 -----HRLTQTVDVVVYKLTVADTVEERIIDLQNKKRELAEQTIEGGAKKEAMKL 1180 >gi|171694309|ref|XP_001912079.1| hypothetical protein [Podospora anserina S mat+] gi|170947103|emb|CAP73908.1| unnamed protein product [Podospora anserina S mat+] Length = 1203 Score = 91.2 bits (225), Expect = 8e-17, Method: Composition-based stats. Identities = 33/151 (21%), Positives = 58/151 (38%), Gaps = 19/151 (12%) Query: 55 KIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAF----------PQGRTLDKDPCTIQ 102 K K L+ +++ +N ++V H L L+ F + ++ + Sbjct: 740 KWKVLKKLLQFWHSNGDKVLVFSHSVRLLRILRHLFNNTNYNVSFLDGSLSYEERQNVVD 799 Query: 103 EWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGF 161 E+N + + + G GLN+ N +V F W+ Q R + G Sbjct: 800 EFNTDPAQFVFLISTKAGGVGLNIT-SANKVVIFDPHWNPAYDLQA-----QDRAYRIGQ 853 Query: 162 KRAVFVYYLIAQNTIDELVLQRLRTKSTIQD 192 R V V+ LI+ TI+E+V R K + Sbjct: 854 IRDVDVFRLISAGTIEEIVYARQIYKQQQAN 884 >gi|159126737|gb|EDP51853.1| nucleosome remodeling complex ATPase subunit (Snf2h), putative [Aspergillus fumigatus A1163] Length = 986 Score = 91.2 bits (225), Expect = 8e-17, Method: Composition-based stats. Identities = 31/162 (19%), Positives = 63/162 (38%), Gaps = 24/162 (14%) Query: 53 DEKIKALEVIIE--KANAAPIIVAYHFNS----------DLARLQKAFPQGRTLDKDPCT 100 K L+ +++ +IV +F+ L +AF R + Sbjct: 527 SGKFLVLKKLLQYYVTTETKVIVFSNFDQCLNLCEDLVMMLQGSNRAFEYARLDGRTTGP 586 Query: 101 IQE------WNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 ++ N+ + + + G GLNL +++VF W+ + +Q R+ Sbjct: 587 WRKVMVHLFQNDPRYKVFLVSIRAGGEGLNLT-SSSVVVFLDEDWNPQVMRQAEARV--- 642 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + G R V +Y L + T++E + +RL K+ + D + Sbjct: 643 --HRIGQTRPVVIYKLRSAGTVEEQMSRRLVKKAYVADRVTE 682 >gi|70997575|ref|XP_753531.1| nucleosome remodeling complex ATPase subunit (Snf2h) [Aspergillus fumigatus Af293] gi|66851167|gb|EAL91493.1| nucleosome remodeling complex ATPase subunit (Snf2h), putative [Aspergillus fumigatus Af293] Length = 986 Score = 91.2 bits (225), Expect = 8e-17, Method: Composition-based stats. Identities = 31/162 (19%), Positives = 63/162 (38%), Gaps = 24/162 (14%) Query: 53 DEKIKALEVIIE--KANAAPIIVAYHFNS----------DLARLQKAFPQGRTLDKDPCT 100 K L+ +++ +IV +F+ L +AF R + Sbjct: 527 SGKFLVLKKLLQYYVTTETKVIVFSNFDQCLNLCEDLVMMLQGSNRAFEYARLDGRTTGP 586 Query: 101 IQE------WNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 ++ N+ + + + G GLNL +++VF W+ + +Q R+ Sbjct: 587 WRKVMVHLFQNDPRYKVFLVSIRAGGEGLNLT-SSSVVVFLDEDWNPQVMRQAEARV--- 642 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + G R V +Y L + T++E + +RL K+ + D + Sbjct: 643 --HRIGQTRPVVIYKLRSAGTVEEQMSRRLVKKAYVADRVTE 682 >gi|125550816|gb|EAY96525.1| hypothetical protein OsI_18430 [Oryza sativa Indica Group] Length = 1088 Score = 91.2 bits (225), Expect = 8e-17, Method: Composition-based stats. Identities = 34/189 (17%), Positives = 71/189 (37%), Gaps = 25/189 (13%) Query: 28 KTVKCLQLANGAVYYDEE-----KHWKEVHDEKIKALEVIIEKAN--AAPIIVAYHFNSD 80 +++ + N + E + K + L+ ++ K +++ Sbjct: 676 LSMQLRKCCNHPYLFVEHYNMYQRQEIVRSSGKFELLDRLLPKLQRAGHRVLLFSQMTKL 735 Query: 81 LARL---------QKAFPQGRTL-DKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYG 128 L L + G T ++ + ++N+ L + G GLNLQ Sbjct: 736 LDILEVYLQIYQFKYMRLDGSTKTEERGRLLADFNKKDSEYFLFLLSTRAGGLGLNLQT- 794 Query: 129 GNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKS 188 + ++ F W+ + QQ +R + G K V V+ L++ +I+E +L R + K Sbjct: 795 ADTVIIFDSDWNPQMDQQAEDR-----AHRIGQKNEVRVFVLVSVGSIEEEILDRAKQKM 849 Query: 189 TIQDLLLNA 197 I ++ A Sbjct: 850 GIDAKVIQA 858 >gi|296424248|ref|XP_002841661.1| hypothetical protein [Tuber melanosporum Mel28] gi|295637907|emb|CAZ85852.1| unnamed protein product [Tuber melanosporum] Length = 1022 Score = 91.2 bits (225), Expect = 8e-17, Method: Composition-based stats. Identities = 29/165 (17%), Positives = 54/165 (32%), Gaps = 22/165 (13%) Query: 46 KHWKEVHDEKIKALEVIIEKANA----APIIVAYHFNSDLARLQKAFPQGRTL------- 94 + K++ L + + V F + L ++K + R Sbjct: 842 RRINSRSSAKVEMLIEKLSETERSCPERKSCVFSQFTTFLDIIEKELQRRRIKFLRFDGS 901 Query: 95 ---DKDPCTIQEWNEGKIP-LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 K + + + P +L + G GLNL + + WW Q I+R Sbjct: 902 MSQQKRAEVVSTFKMDQGPNILLLSLRAGGVGLNLTT-ASQVFMMDPWWSFAVEAQAIDR 960 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQ-RLRTKSTIQDLL 194 + + G V VY + + T++E ++ K I L Sbjct: 961 V-----HRMGQTSEVMVYRFVVEGTVEERIVHTIQARKKFIASSL 1000 >gi|115633814|ref|XP_780898.2| PREDICTED: similar to excision repair protein, partial [Strongylocentrotus purpuratus] Length = 973 Score = 91.2 bits (225), Expect = 8e-17, Method: Composition-based stats. Identities = 28/153 (18%), Positives = 59/153 (38%), Gaps = 18/153 (11%) Query: 55 KIKALEVIIE--KANAAPIIVAYHFNSDLARLQK---------AFPQGRTLDKDPCTIQE 103 K+ +E +++ K +++ L ++ T+ I + Sbjct: 352 KMIVVESLLKLWKEQNHRVLLFSQSKQMLDIMEDFVKDRYSYMRMDGTTTISSRQPLITK 411 Query: 104 WN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFK 162 +N + +I L G G+NL G N ++ + W+ Q ER + G Sbjct: 412 FNSDPRIFLFLLTTRVGGLGVNLT-GANRVIIYDPDWNPSTDTQARERSW-----RIGQT 465 Query: 163 RAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 + V +Y L+ +I+E + R K+ + + +L Sbjct: 466 KQVTIYRLLTAGSIEEKIYHRQIFKTFLTNRVL 498 >gi|50549971|ref|XP_502458.1| YALI0D05775p [Yarrowia lipolytica] gi|49648326|emb|CAG80646.1| YALI0D05775p [Yarrowia lipolytica] Length = 990 Score = 91.2 bits (225), Expect = 8e-17, Method: Composition-based stats. Identities = 38/231 (16%), Positives = 90/231 (38%), Gaps = 43/231 (18%) Query: 6 KFQRELYCDLQGENIEAFNS-----------ASKTVKCLQLAN----------GAVYYDE 44 Q + Y L ++I+A N + ++ + N G Y + Sbjct: 336 DMQVQWYQKLLEKDIDAVNGQLGKREGKTRLLNIVMQLRKCCNHPYLFEGAEPGPPYTTD 395 Query: 45 EKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQ---------KAFPQGRT 93 E + K+ L+ ++++ + + +++ + L L+ + G T Sbjct: 396 EHLV--FNCGKMVMLDKLLKRLKSQGSRVLIFSQMSRMLDILEDYCSFRDYEYSRIDGST 453 Query: 94 LDKDP-CTIQEWNE--GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 +D I E+N + + + G G+NL +I++ + W+ + Q ++R Sbjct: 454 AHEDRIAAIDEYNAEGSEKFVFLLTTRAGGLGINLT-SADIVILYDSDWNPQADLQAMDR 512 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 + G + V+V+ + +N ++E VL+R K + L++ + + Sbjct: 513 -----AHRIGQTKQVYVFRFVTENAVEEKVLERAAQKLRLDQLVIQQGRTQ 558 >gi|281208788|gb|EFA82963.1| SNF2-related domain-containing protein [Polysphondylium pallidum PN500] Length = 428 Score = 91.2 bits (225), Expect = 8e-17, Method: Composition-based stats. Identities = 31/153 (20%), Positives = 65/153 (42%), Gaps = 18/153 (11%) Query: 55 KIKALEVIIEKANAAPIIVAYHFNSDLARLQK---------AFPQGRTLDKDPCTIQEWN 105 K+ L E+ ++V L L++ G T D I + Sbjct: 255 KLNELLD-AERKKGNKVLVFSMMTRVLDILEEVLSMQDISFCRLDGTTPVNDRQDIIDLF 313 Query: 106 EGK--IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKR 163 G IP++ + G G+NL N+++F+ + ++ + +ER R + G ++ Sbjct: 314 SGDKTIPVMLLSTLAGGLGINLTC-ANVVIFYDISFNPQ-----VERQAEDRAHRLGQEK 367 Query: 164 AVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 V+++ +I +++D +L+ TK + D +L Sbjct: 368 TVYIHRIIVDDSVDNNILEMSTTKRELNDSMLE 400 >gi|224049423|ref|XP_002191909.1| PREDICTED: hypothetical protein [Taeniopygia guttata] Length = 1108 Score = 91.2 bits (225), Expect = 8e-17, Method: Composition-based stats. Identities = 35/162 (21%), Positives = 66/162 (40%), Gaps = 19/162 (11%) Query: 49 KEVHDEKIKALEVIIE--KANAAPIIVAYHFNSDLARL---------QKAFPQGRT-LDK 96 + + K +ALE I+ K +++ F L L + G+T + + Sbjct: 931 QILDSGKFRALERILSNLKEKGDRVVLFSQFTMMLDILEVLLKHWQHRYLRLDGKTQISE 990 Query: 97 DPCTIQEWNEG-KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTR 155 I E+N I + + G G+NL NI++ + + +Q +R Sbjct: 991 RIHLIDEFNTDMDIFVFLLSTKAGGLGINLT-SANIVILHDIDCNPYNDKQAEDRC---- 1045 Query: 156 QRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + G R V V LI++ TI+E +L+ + K ++ + A Sbjct: 1046 -HRVGQTREVQVIKLISKGTIEETMLKISQQKLKLEQDMTAA 1086 >gi|221488451|gb|EEE26665.1| chromatin remodelling complex protein SNF2L, putative [Toxoplasma gondii GT1] Length = 1556 Score = 91.2 bits (225), Expect = 8e-17, Method: Composition-based stats. Identities = 44/222 (19%), Positives = 87/222 (39%), Gaps = 38/222 (17%) Query: 6 KFQRELYCDLQGENIEAFNSAS-----KTVKCLQL---ANGAVYYD---------EEKHW 48 K Q++LY D+ +N+E N+ S +QL N +D E +H Sbjct: 441 KLQKKLYADILSKNVEVLNAMSGSKTQMLNILMQLRKCCNHPYLFDGVEPGPPYVEGEHM 500 Query: 49 KEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQ---------KAFPQGRTLDKD 97 E K+ L+ ++ + A + +++ L + G T + Sbjct: 501 VEAA-GKMALLDKLLPRLKAEGSRVLLFSQMTRLLDIVDDYCRWRGFDYCRIDGGTPGTE 559 Query: 98 PCT-IQEWNE--GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 I E+N K L + G G+NL +I++ F ++ + Q ++R Sbjct: 560 RQERIDEFNAEGSKKFLFLLSTRAGGLGINL-ATADIVILFDSDFNPQMDLQAMDR---- 614 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + G K+ V VY + +T++ +++R K + L++ Sbjct: 615 -AHRIGQKKRVVVYRFVTGDTVEAKIVERAAKKLKLDSLVIQ 655 >gi|222630170|gb|EEE62302.1| hypothetical protein OsJ_17090 [Oryza sativa Japonica Group] Length = 1087 Score = 91.2 bits (225), Expect = 8e-17, Method: Composition-based stats. Identities = 34/189 (17%), Positives = 71/189 (37%), Gaps = 25/189 (13%) Query: 28 KTVKCLQLANGAVYYDEE-----KHWKEVHDEKIKALEVIIEKAN--AAPIIVAYHFNSD 80 +++ + N + E + K + L+ ++ K +++ Sbjct: 675 LSMQLRKCCNHPYLFVEHYNMYQRQEIVRSSGKFELLDRLLPKLQRAGHRVLLFSQMTKL 734 Query: 81 LARL---------QKAFPQGRTL-DKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYG 128 L L + G T ++ + ++N+ L + G GLNLQ Sbjct: 735 LDILEVYLQMYQFKYMRLDGSTKTEERGRLLADFNKKDSEYFLFLLSTRAGGLGLNLQT- 793 Query: 129 GNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKS 188 + ++ F W+ + QQ +R + G K V V+ L++ +I+E +L R + K Sbjct: 794 ADTVIIFDSDWNPQMDQQAEDR-----AHRIGQKNEVRVFVLVSVGSIEEEILDRAKQKM 848 Query: 189 TIQDLLLNA 197 I ++ A Sbjct: 849 GIDAKVIQA 857 >gi|195498627|ref|XP_002096604.1| GE24955 [Drosophila yakuba] gi|194182705|gb|EDW96316.1| GE24955 [Drosophila yakuba] Length = 1055 Score = 91.2 bits (225), Expect = 8e-17, Method: Composition-based stats. Identities = 32/164 (19%), Positives = 62/164 (37%), Gaps = 22/164 (13%) Query: 52 HDEKIKALEVIIEKA----NAAPIIVAYHFNSDLARLQKAFPQGRT----------LDKD 97 KI + I++ + + IV + S L L++ + Sbjct: 882 PSSKINMVIQILKTSILNSSDDKAIVVSQWTSVLDILREHLSNDGVTTLSLNGTIPVKNR 941 Query: 98 PCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTR 155 + ++N+ +L + G GLNL G N L+ L W+ + Q +RI Sbjct: 942 QDIVNQFNDRNNQKRVLLLSLTAGGVGLNL-IGANHLLLLDLHWNPQLEAQAQDRI---- 996 Query: 156 QRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 + G K+ V +Y + +T+++ + K + D +L K Sbjct: 997 -YRVGQKKNVTIYKFMCVDTVEQRIKALQDKKLDLADGVLTGAK 1039 >gi|321265109|ref|XP_003197271.1| DEAD/DEAH box helicase involved in nucleotide-excision repair [Cryptococcus gattii WM276] gi|317463750|gb|ADV25484.1| DEAD/DEAH box helicase involved in nucleotide-excision repair, putative [Cryptococcus gattii WM276] Length = 804 Score = 91.2 bits (225), Expect = 9e-17, Method: Composition-based stats. Identities = 38/229 (16%), Positives = 74/229 (32%), Gaps = 48/229 (20%) Query: 5 HKFQRELYCDLQGENIEAFNSASKTVKCLQLA------NGAVYYDEEKHWKEV------- 51 K + + DL G K Q+ N A Y D ++ + Sbjct: 559 EKDEADELADLLGG------LGVAKGKTCQMCFMKLDDNSAQYCDACENIAQRVRRQSGA 612 Query: 52 -------HDEKIKALEVIIEK-----ANAAPIIVAYHFNSDLARLQKAFPQGRTL----- 94 KI+ L ++ + N IV F S L ++ + Sbjct: 613 SEDALPPTSAKIRMLLKLLSEIDEKSGNKEKTIVFSQFTSFLDLVEPYLKKYSIKYVRYD 672 Query: 95 ------DKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMI 148 + + ++ K ++ + GLNL N ++ LWW+ Q Sbjct: 673 GSMRNDHRQESLAKIRDDSKTRVILISFKAGSTGLNLTC-CNNVILMDLWWNPALEDQAF 731 Query: 149 ERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 +R + G K V ++ L + T+++ +L +K + + L+ Sbjct: 732 DR-----AHRLGQKLDVNIWKLTIEETVEDRILILQNSKRDLANAALSG 775 >gi|239985588|ref|NP_031716.2| chromodomain-helicase-DNA-binding protein 1 [Mus musculus] gi|109732363|gb|AAI15823.1| Chromodomain helicase DNA binding protein 1 [Mus musculus] gi|148688507|gb|EDL20454.1| chromodomain helicase DNA binding protein 1 [Mus musculus] Length = 1711 Score = 91.2 bits (225), Expect = 9e-17, Method: Composition-based stats. Identities = 27/153 (17%), Positives = 56/153 (36%), Gaps = 21/153 (13%) Query: 68 AAPIIVAYHFNSDLARLQKAFP---------QGRTLDK-DPCTIQEWN-EGKIPL-LFAH 115 +++ L L + G + + +N EG Sbjct: 802 GNRVLIFSQMVRMLDILAEYLKYRQFPFQRLDGSIKGELRKQALDHFNAEGSEDFCFLLS 861 Query: 116 PASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNT 175 + G G+NL + +V F W+ + Q R + G K+ V +Y L+ + + Sbjct: 862 TRAGGLGINL-ASADTVVIFDSDWNPQNDLQAQAR-----AHRIGQKKQVNIYRLVTKGS 915 Query: 176 IDELVLQRLRTKSTIQDLL---LNALKKETIHV 205 ++E +L+R + K + L+ ++ K +H Sbjct: 916 VEEDILERAKKKMVLDHLVIQRMDTTGKTVLHT 948 >gi|281344850|gb|EFB20434.1| hypothetical protein PANDA_017908 [Ailuropoda melanoleuca] Length = 1133 Score = 91.2 bits (225), Expect = 9e-17, Method: Composition-based stats. Identities = 25/161 (15%), Positives = 59/161 (36%), Gaps = 20/161 (12%) Query: 52 HDEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQKAF---------PQGRTLDK-DPC 99 K+ L+ ++ + +++ L L + G + Sbjct: 769 SSGKLILLDKLLTRLRERGNRVLIFSQMVRMLDILAEYLTIKHYPFQRLDGSIKGEIRKQ 828 Query: 100 TIQEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 + +N + + G G+NL + +V F W+ + Q R Sbjct: 829 ALDHFNADGSEDFCFLLSTRAGGLGINL-ASADTVVIFDSDWNPQNDLQAQAR-----AH 882 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNAL 198 + G K+ V +Y L+ + T++E +++R + K + L++ + Sbjct: 883 RIGQKKQVNIYRLVTKGTVEEEIIERAKKKMVLDHLVIQRM 923 >gi|239992059|ref|ZP_04712723.1| hypothetical protein SrosN1_32479 [Streptomyces roseosporus NRRL 11379] Length = 743 Score = 91.2 bits (225), Expect = 9e-17, Method: Composition-based stats. Identities = 32/191 (16%), Positives = 74/191 (38%), Gaps = 24/191 (12%) Query: 14 DLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKA--NAAPI 71 + E+ EA+ A + + +++ A + K++ L ++ +A N + Sbjct: 525 EFGAEDREAYGEAVASGRFMRMRRAA-------YAVPKTSAKLERLRELVGEARDNGLKV 577 Query: 72 IVAYHFNSDLARLQKAF--------PQGRTLDKDPCTIQEWNE-GKIPLLFAHPASCGHG 122 +V +F LA + A + + ++ +L + + G G Sbjct: 578 VVFSYFREVLAAIGDALGPDVFGPLSGSVPPARRQELVDAFSSVAGHAVLLSQIQAGGTG 637 Query: 123 LNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQ 182 LN+Q ++++ Q + R + G R V V+ L+A +++D+ +++ Sbjct: 638 LNMQ-AASVVILCEPQIKPTLEHQAVAR-----AHRMGQVRTVQVHRLLATDSVDQRLVE 691 Query: 183 RLRTKSTIQDL 193 L K + D Sbjct: 692 LLARKDRLFDA 702 >gi|225678325|gb|EEH16609.1| SNF2 family ATP-dependent chromatin-remodeling factor snf21 [Paracoccidioides brasiliensis Pb03] Length = 1391 Score = 91.2 bits (225), Expect = 9e-17, Method: Composition-based stats. Identities = 40/225 (17%), Positives = 78/225 (34%), Gaps = 33/225 (14%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQL---ANGA----VYYDEEKHWKEVHD- 53 K Y + + + +QL N DE + +D Sbjct: 750 KLYKQLVTHNKLVVSDGKGGKTGMRGLSNMLMQLRKLCNHPFVFESVEDEMNPGRATNDL 809 Query: 54 -----EKIKALEVIIEK--ANAAPIIVAYHFNSD---------LARLQKAFPQGRTLDKD 97 K + L+ I+ K A+ +++ + L ++ G T D Sbjct: 810 IWRTAGKFELLDRILPKFKASGHRVLMFFQMTQIMNIMEDFLRLRGMKYLRLDGSTKSDD 869 Query: 98 PCTI-QEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 + +E+N + + G GLNLQ + ++ + W+ + Q Sbjct: 870 RSDLLKEFNAPGSEYFCFLLSTRAGGLGLNLQT-ADTVIIYDSDWNPHQDLQA-----QD 923 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 R + G K V + LI N+++E +L+R + K + ++ A K Sbjct: 924 RAHRIGQKNEVRILRLITSNSVEERILERAQFKLDMDGKVIQAGK 968 >gi|156348349|ref|XP_001621816.1| hypothetical protein NEMVEDRAFT_v1g1681 [Nematostella vectensis] gi|156208092|gb|EDO29716.1| predicted protein [Nematostella vectensis] Length = 147 Score = 91.2 bits (225), Expect = 9e-17, Method: Composition-based stats. Identities = 28/134 (20%), Positives = 49/134 (36%), Gaps = 17/134 (12%) Query: 68 AAPIIVAYHFNS---------DLARLQKAFPQGRTL--DKDPCTIQEWNEGKIPLLFAHP 116 +++ + S D + G T D++ + L F Sbjct: 20 KQKVLIFSSYTSHLKIYTDWCDKNNTPYSLLTGSTKIADRESEVANFQKDDNKLLFFISL 79 Query: 117 ASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTI 176 + G GLNL + ++ WW+ Q I R + G + V V IA++TI Sbjct: 80 KAGGTGLNLTK-ASYVILLDPWWNPFAELQAIGR-----AHRIGQENQVNVVRFIAKDTI 133 Query: 177 DELVLQRLRTKSTI 190 +E + Q ++K I Sbjct: 134 EEKISQLQQSKKEI 147 >gi|302510453|ref|XP_003017178.1| hypothetical protein ARB_04055 [Arthroderma benhamiae CBS 112371] gi|291180749|gb|EFE36533.1| hypothetical protein ARB_04055 [Arthroderma benhamiae CBS 112371] Length = 1405 Score = 91.2 bits (225), Expect = 9e-17, Method: Composition-based stats. Identities = 39/225 (17%), Positives = 77/225 (34%), Gaps = 33/225 (14%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQL---ANGAVYYDE----------EKHW 48 K Y + + + +QL N +D Sbjct: 831 KLYKQLVTHNKLAVSDGKGGKTPVRGLSNMLMQLRKLCNHPFVFDSVEEELNPGKATNDL 890 Query: 49 KEVHDEKIKALEVIIEK--ANAAPIIVAYH------FNSDLAR---LQKAFPQGRTLDKD 97 K + L+ I+ K A+ +++ + D R ++ G T D Sbjct: 891 IWRTAGKFELLDRILPKFFASGHRVLMFFQMTQIMNIMEDFMRFRGMKYLRLDGATKSDD 950 Query: 98 PCTI-QEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 + + +NE + + G GLNLQ + ++ + W+ + Q Sbjct: 951 RSDLLRRFNEPGSEYFCFLLSTRAGGLGLNLQT-ADTVIIYDSDWNPHQDLQA-----QD 1004 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 R + G K V + LI+ N+++E +L+R + K + ++ A K Sbjct: 1005 RAHRIGQKNEVRILRLISSNSVEERILERAQFKLDMDGKVIQAGK 1049 >gi|145484966|ref|XP_001428492.1| hypothetical protein [Paramecium tetraurelia strain d4-2] gi|124395578|emb|CAK61094.1| unnamed protein product [Paramecium tetraurelia] Length = 1405 Score = 91.2 bits (225), Expect = 9e-17, Method: Composition-based stats. Identities = 26/141 (18%), Positives = 50/141 (35%), Gaps = 18/141 (12%) Query: 67 NAAPIIVAYHFNSDLARLQKAFPQGRTLDK----------DPCTIQEWNEGKI--PLLFA 114 +++ F + LA L++ + + I +N+ K + Sbjct: 794 EDKKMLIFSQFTNMLALLEEYLQFNQIKYEKITGDIKQIDRQNAIDRFNDQKKGRQVFLL 853 Query: 115 HPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQN 174 + G G+NL I+V F W+ + Q R + G + V VY I +N Sbjct: 854 STKAGGQGINLT-AAEIVVIFDSDWNPQNDIQATAR-----AHRIGQDKQVTVYRFITKN 907 Query: 175 TIDELVLQRLRTKSTIQDLLL 195 T + + +R K + + Sbjct: 908 TYEAKMFERAFAKLGLDQAIF 928 >gi|328722605|ref|XP_001946846.2| PREDICTED: chromodomain-helicase-DNA-binding protein 1-like [Acyrthosiphon pisum] Length = 1670 Score = 91.2 bits (225), Expect = 9e-17, Method: Composition-based stats. Identities = 35/220 (15%), Positives = 77/220 (35%), Gaps = 36/220 (16%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYY---------DEEKHWKEVH 52 K Y+ ++ +G + N + KC N A+ D+ Sbjct: 646 KNYNALRKGS----KGSSTTFLNIMIELKKC---CNHALLTKPQENENTADDNLQGLLRG 698 Query: 53 DEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQKAF---------PQGRTL-DKDPCT 100 K+ L+ ++ + +++ L L + G D Sbjct: 699 SGKLMLLDKLLVRLRETGHRVLIFSQMVRMLDILAEYLSYRHLPFQRLDGSIKGDIRRQA 758 Query: 101 IQEWN-EGKIPL-LFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQ 158 ++ +N EG + G G+NL + ++ F W+ + Q R + Sbjct: 759 LEHFNAEGSQDFCFLLSTRAGGLGINL-ATADTVIIFDSDWNPQNDLQAQAR-----AHR 812 Query: 159 AGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNAL 198 G K V +Y L+ + +++E +++R + K + L++ + Sbjct: 813 IGQKNQVNIYRLVTKGSVEEDIVERAKQKMVLDHLVIQRM 852 >gi|224009183|ref|XP_002293550.1| hypothetical protein THAPSDRAFT_263996 [Thalassiosira pseudonana CCMP1335] gi|220970950|gb|EED89286.1| hypothetical protein THAPSDRAFT_263996 [Thalassiosira pseudonana CCMP1335] Length = 1000 Score = 91.2 bits (225), Expect = 9e-17, Method: Composition-based stats. Identities = 37/210 (17%), Positives = 78/210 (37%), Gaps = 27/210 (12%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEV 61 K Y F + +I+A + K + LQ+ ++ + + +E Sbjct: 607 KWYKSFVDR--AEKSEMDIKAIENGGKIIVLLQIIAHCDSIGDKVVVFSQCLKTLSYVEE 664 Query: 62 IIEKANA---APIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKI--------- 109 I++ N P + Y+ RL + +G+ + ++ G + Sbjct: 665 ILQSPNWGGFQPFLPDYNGK---QRL-GGWEKGKEYLRIDGSVDARERGDLVDTFNTEAI 720 Query: 110 ---PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVF 166 + + G G+NL N +V W+ Q + R + G + F Sbjct: 721 AHSKVFLLSTQAGGLGINL-VAANRVVLLDSHWNPAISDQAVHRC-----YRFGQTKPTF 774 Query: 167 VYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 Y L+A+ +++E + R KS++ DL+++ Sbjct: 775 CYRLLAEGSMEEKIYSRAAAKSSLSDLVID 804 >gi|158259161|dbj|BAF85539.1| unnamed protein product [Homo sapiens] Length = 1049 Score = 91.2 bits (225), Expect = 9e-17, Method: Composition-based stats. Identities = 25/161 (15%), Positives = 59/161 (36%), Gaps = 20/161 (12%) Query: 52 HDEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQKAF---------PQGRTLDK-DPC 99 K+ L+ ++ + +++ L L + G + Sbjct: 789 SSGKLILLDKLLTRLRERGNRVLIFSQMVRMLDILAEYLTIKHYPFQRLDGSIKGEIRKQ 848 Query: 100 TIQEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 + +N + + G G+NL + +V F W+ + Q R Sbjct: 849 ALDHFNADGSEDFCFLLSTRAGGLGINL-ASADTVVIFDSDWNPQNDLQAQAR-----AH 902 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNAL 198 + G K+ V +Y L+ + T++E +++R + K + L++ + Sbjct: 903 RIGQKKQVNIYRLVTKGTVEEEIIERAKKKMVLDHLVIQRM 943 >gi|35505451|gb|AAH57567.1| Chromodomain helicase DNA binding protein 1-like [Mus musculus] gi|38571574|gb|AAH62966.1| Chromodomain helicase DNA binding protein 1-like [Mus musculus] Length = 900 Score = 91.2 bits (225), Expect = 9e-17, Method: Composition-based stats. Identities = 24/158 (15%), Positives = 61/158 (38%), Gaps = 18/158 (11%) Query: 52 HDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAFP---------QGRTLDKDPC- 99 K+ L+ ++ + +++ L LQ G ++ Sbjct: 339 ASGKLHLLDRLLAFLYSGGHRVLLFSQMTHMLDILQDYMDYRGYSYERVDGSVRGEERHL 398 Query: 100 TIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQA 159 I+ + I + + G G+NL + ++F ++ + Q R + Sbjct: 399 AIKNFGNQPIFVFLLSTRAGGVGMNLT-AADTVIFVDSDFNPQNDLQAAAR-----AHRI 452 Query: 160 GFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 G ++V V LI ++T++E+V ++ +K + ++++ Sbjct: 453 GQNKSVKVIRLIGRDTVEEIVYRKAASKLQLTNMVIEG 490 >gi|297843184|ref|XP_002889473.1| predicted protein [Arabidopsis lyrata subsp. lyrata] gi|297335315|gb|EFH65732.1| predicted protein [Arabidopsis lyrata subsp. lyrata] Length = 876 Score = 91.2 bits (225), Expect = 9e-17, Method: Composition-based stats. Identities = 35/163 (21%), Positives = 64/163 (39%), Gaps = 20/163 (12%) Query: 55 KIKALEVIIEK--ANAAPIIVAYHFNSDLARLQK----------AFPQGRTLDKDPCTIQ 102 K++ALE ++ + I++ + L L+K + + Sbjct: 530 KMRALEKLMASWISKGDKILLFSYSVRMLDILEKFLIRKGYSFARLDGSTPTNLRQSLVD 589 Query: 103 EWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGF 161 ++N + + G GLNL N +V F W+ Q R + G Sbjct: 590 DFNASPSKQVFLISTKAGGLGLNL-VSANRVVIFDPNWNPSHDLQA-----QDRSFRYGQ 643 Query: 162 KRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIH 204 KR V V+ L++ +++ELV R K + ++ + A K ET + Sbjct: 644 KRHVVVFRLLSAGSLEELVYTRQVYKQQLSNIAV-AGKMETRY 685 >gi|4204312|gb|AAD10693.1| Hypothetical protein [Arabidopsis thaliana] Length = 874 Score = 91.2 bits (225), Expect = 9e-17, Method: Composition-based stats. Identities = 35/163 (21%), Positives = 64/163 (39%), Gaps = 20/163 (12%) Query: 55 KIKALEVIIEK--ANAAPIIVAYHFNSDLARLQK----------AFPQGRTLDKDPCTIQ 102 K++ALE ++ + I++ + L L+K + + Sbjct: 541 KMRALEKLMASWISKGDKILLFSYSVRMLDILEKFLIRKGYSFARLDGSTPTNLRQSLVD 600 Query: 103 EWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGF 161 ++N + + G GLNL N +V F W+ Q R + G Sbjct: 601 DFNASPSKQVFLISTKAGGLGLNL-VSANRVVIFDPNWNPSHDLQA-----QDRSFRYGQ 654 Query: 162 KRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIH 204 KR V V+ L++ +++ELV R K + ++ + A K ET + Sbjct: 655 KRHVVVFRLLSAGSLEELVYTRQVYKQQLSNIAV-AGKMETRY 696 >gi|67606806|ref|XP_666775.1| chromatin remodelling complex protein SNF2L [Cryptosporidium hominis TU502] gi|54657830|gb|EAL36543.1| chromatin remodelling complex protein SNF2L [Cryptosporidium hominis] Length = 1292 Score = 91.2 bits (225), Expect = 9e-17, Method: Composition-based stats. Identities = 40/222 (18%), Positives = 87/222 (39%), Gaps = 38/222 (17%) Query: 6 KFQRELYCDLQGENIEAFNSAS--------KTVKCLQLANGAVYYD---------EEKHW 48 K Q+++Y +L N++ NSAS ++ + N +D E H Sbjct: 451 KLQKKIYSELLTRNLDVLNSASSNKTQMLNLLMQLRKTCNHPYLFDGVEPGPPYVEGFHM 510 Query: 49 KEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKA-----FPQGRTLDKDPCT- 100 E K+ L ++ K + + +++ L + +P R P Sbjct: 511 VE-ASGKMVLLHKLLPKLFSQGSRVLLFSQMTRLLDIIDDYLRWSGYPYCRIDGSTPGIE 569 Query: 101 ----IQEWNE--GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 I +N+ + + + G G+NL ++++ F ++ + Q ++R Sbjct: 570 RQERIDIFNKEGSEKLIFLLSTRAGGIGINL-ATADVVILFDSDFNPQMDLQAMDR---- 624 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + G K+ V VY + + T++E +++R K + L++ Sbjct: 625 -AHRIGQKKPVTVYRFVTEKTVEERIVERAAKKLKLDSLIIQ 665 >gi|331232855|ref|XP_003329089.1| helicase SWR1 [Puccinia graminis f. sp. tritici CRL 75-36-700-3] gi|309308079|gb|EFP84670.1| helicase SWR1 [Puccinia graminis f. sp. tritici CRL 75-36-700-3] Length = 2115 Score = 90.8 bits (224), Expect = 9e-17, Method: Composition-based stats. Identities = 29/142 (20%), Positives = 53/142 (37%), Gaps = 20/142 (14%) Query: 69 APIIVAYHFNSDLARLQK-------------AFPQGRTLDKDPCTIQEWN-EGKIPLLFA 114 +++ L ++ K +Q +N + I L Sbjct: 1901 HRVLIFCQMKQMLDIIEHDLFKLQMPNVTYMRMDGSTDATKRHDVVQTFNSDPSIDCLLL 1960 Query: 115 HPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQN 174 G GLNL G + ++F W+ + Q ++R + G K+ V VY LI + Sbjct: 1961 TTHVGGLGLNLT-GADTVIFVEHDWNPMKDLQAMDR-----AHRLGQKKVVNVYRLITRA 2014 Query: 175 TIDELVLQRLRTKSTIQDLLLN 196 T++E ++ R K I ++N Sbjct: 2015 TLEEKIMGLQRFKMNIATSIVN 2036 >gi|291449046|ref|ZP_06588436.1| conserved hypothetical protein [Streptomyces roseosporus NRRL 15998] gi|291351993|gb|EFE78897.1| conserved hypothetical protein [Streptomyces roseosporus NRRL 15998] Length = 703 Score = 90.8 bits (224), Expect = 9e-17, Method: Composition-based stats. Identities = 32/191 (16%), Positives = 74/191 (38%), Gaps = 24/191 (12%) Query: 14 DLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKA--NAAPI 71 + E+ EA+ A + + +++ A + K++ L ++ +A N + Sbjct: 485 EFGAEDREAYGEAVASGRFMRMRRAA-------YAVPKTSAKLERLRELVGEARDNGLKV 537 Query: 72 IVAYHFNSDLARLQKAF--------PQGRTLDKDPCTIQEWNE-GKIPLLFAHPASCGHG 122 +V +F LA + A + + ++ +L + + G G Sbjct: 538 VVFSYFREVLAAIGDALGPDVFGPLSGSVPPARRQELVDAFSSVAGHAVLLSQIQAGGTG 597 Query: 123 LNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQ 182 LN+Q ++++ Q + R + G R V V+ L+A +++D+ +++ Sbjct: 598 LNMQ-AASVVILCEPQIKPTLEHQAVAR-----AHRMGQVRTVQVHRLLATDSVDQRLVE 651 Query: 183 RLRTKSTIQDL 193 L K + D Sbjct: 652 LLARKDRLFDA 662 >gi|320582398|gb|EFW96615.1| DNA helicase [Pichia angusta DL-1] Length = 1219 Score = 90.8 bits (224), Expect = 9e-17, Method: Composition-based stats. Identities = 40/226 (17%), Positives = 78/226 (34%), Gaps = 35/226 (15%) Query: 3 QYHKF--QRELYCDLQGENIEAFNSASKTVKCLQL--ANGAVYYDEEKHWKEVHDE---- 54 Y + L+ + + K +QL Y EE Sbjct: 700 LYKQMLNHNALFVGVGTQGATKTGLRGLNNKIMQLRKVCNHPYVFEEVEDIVNPSRLTTD 759 Query: 55 -------KIKALEVIIEK--ANAAPIIVAYH------FNSDLAR---LQKAFPQGRTLDK 96 K + L+ ++ K A+ +++ + D R ++ G T Sbjct: 760 LIWRSSGKFELLDRVLPKFKASGHKVLIFFQMTQVMDIMEDYLRFRDMKYMRLDGSTKAD 819 Query: 97 DPCT-IQEWNEGKIPLL--FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGV 153 D ++++N + G GLNLQ + ++ F W+ + Q Sbjct: 820 DRQDMLKDFNAPDSEYFCFLLSTRAGGLGLNLQT-ADTVIIFDTDWNPHQDLQA-----Q 873 Query: 154 TRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 R + G K V + LI +++++E++L+R K I ++ A K Sbjct: 874 DRAHRIGQKNEVRILRLITEDSVEEVILERAHQKLDIDGKVIQAGK 919 >gi|310792871|gb|EFQ28332.1| SNF2 family domain-containing protein [Glomerella graminicola M1.001] Length = 1119 Score = 90.8 bits (224), Expect = 9e-17, Method: Composition-based stats. Identities = 40/226 (17%), Positives = 82/226 (36%), Gaps = 43/226 (19%) Query: 6 KFQRELYCDLQGENIEAFNSAS--------KTVKCLQLAN-------------GAVYYDE 44 Q + Y + ++I+A N A+ +QL G Y + Sbjct: 419 DMQVKWYQKILEKDIDAVNGANGKRESKTRLLNIVMQLRKCCNHPYLFEGAEPGPPYTTD 478 Query: 45 EKHWKEVHDEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQK----------AFPQGR 92 E + K+ L+ ++ + + +++ + L L+ G Sbjct: 479 EHLV--YNAGKMVVLDKLLARMQKQGSRVLIFSQMSRLLDILEDYCVFREYKYCRIDGGT 536 Query: 93 TLDKDPCTIQEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 + I E+N+ + + + G G+NL +I+V + W+ + Q ++R Sbjct: 537 AHEDRIAAIDEYNKPGSEKFIFLLTTRAGGLGINLT-SADIVVLYDSDWNPQADLQAMDR 595 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + G + V VY + N I+E VL+R K + L++ Sbjct: 596 -----AHRIGQTKQVVVYRFVTDNAIEEKVLERAAQKLRLDQLVIQ 636 >gi|307186121|gb|EFN71846.1| Transcription termination factor 2 [Camponotus floridanus] Length = 830 Score = 90.8 bits (224), Expect = 9e-17, Method: Composition-based stats. Identities = 39/167 (23%), Positives = 65/167 (38%), Gaps = 18/167 (10%) Query: 45 EKHWKEVHDEKIKALEVIIEKANAAPIIVAYH------FNSDLARLQKA----FPQGRTL 94 + + ++ I++K+ IIV+ S L+ ++ A F + Sbjct: 652 DDRISSKMRTLLNMVKEILQKSEDKLIIVSQWTALLNVIASHLSSIKGATFSKFTGNVAI 711 Query: 95 DKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIG 152 I +N +L + G GLNL G N L+ F + W+ + Q +RI Sbjct: 712 KDRQSIIDSFNSRNSDPRILLLSLTAGGVGLNL-VGANHLLLFDIHWNPQLETQAQDRI- 769 Query: 153 VTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 + G K+ V VY I NTI+E + K I +L+ K Sbjct: 770 ----YRFGQKKNVHVYKFICLNTIEERIKGLQDRKLEIASNVLSGDK 812 >gi|187469489|gb|AAI66868.1| Smarca5 protein [Rattus norvegicus] Length = 584 Score = 90.8 bits (224), Expect = 9e-17, Method: Composition-based stats. Identities = 26/161 (16%), Positives = 63/161 (39%), Gaps = 20/161 (12%) Query: 50 EVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQ---------KAFPQGRTLDKDP 98 + K+ L+ ++ K + +++ L L+ G+T + Sbjct: 11 VTNSGKMVVLDKLLPKLKEQGSRVLIFSQMTRVLDILEDYCMWRNYEYCRLDGQTPHDER 70 Query: 99 CT-IQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTR 155 I +NE + + G G+NL ++++ + W+ + Q ++R Sbjct: 71 QDSINAYNEPNSTKFVFMLSTRAGGLGINL-ATADVVILYDSDWNPQVDLQAMDR----- 124 Query: 156 QRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + G + V V+ I NT++E +++R K + +++ Sbjct: 125 AHRIGQTKTVRVFRFITDNTVEERIVERAEMKLRLDSIVIQ 165 >gi|149636559|ref|XP_001513135.1| PREDICTED: similar to Chromodomain helicase DNA binding protein 1 [Ornithorhynchus anatinus] Length = 1807 Score = 90.8 bits (224), Expect = 9e-17, Method: Composition-based stats. Identities = 27/153 (17%), Positives = 56/153 (36%), Gaps = 21/153 (13%) Query: 68 AAPIIVAYHFNSDLARLQKAFP---------QGRTLDK-DPCTIQEWN-EGKIPL-LFAH 115 +++ L L + G + + +N EG Sbjct: 805 GNRVLIFSQMVRMLDILAEYLKYRQFPFQRLDGSIKGELRKQALDHFNAEGSEDFCFLLS 864 Query: 116 PASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNT 175 + G G+NL + +V F W+ + Q R + G K+ V +Y L+ + + Sbjct: 865 TRAGGLGINL-ASADTVVIFDSDWNPQNDLQAQAR-----AHRIGQKKQVNIYRLVTKGS 918 Query: 176 IDELVLQRLRTKSTIQDLL---LNALKKETIHV 205 ++E +L+R + K + L+ ++ K +H Sbjct: 919 VEEDILERAKKKMVLDHLVIQRMDTTGKTVLHT 951 >gi|218511830|sp|Q6BIP2|RAD5_DEBHA RecName: Full=DNA repair protein RAD5 Length = 1190 Score = 90.8 bits (224), Expect = 9e-17, Method: Composition-based stats. Identities = 31/172 (18%), Positives = 64/172 (37%), Gaps = 23/172 (13%) Query: 40 VYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFP---------- 89 +Y + I L+++ E++ ++V F+S L ++ Sbjct: 1003 LYLYDPTKTSSKIQCLINHLKILKEQSPNEQVVVFSQFSSYLDIIENELKIQISNDFVVY 1062 Query: 90 --QGRT-LDKDPCTIQEWN----EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLE 142 GR +++ ++ ++ E K+ +L + G GLNL + WW Sbjct: 1063 KFDGRLNMNERQKILENFSSQKHENKVMILLLSLKAGGVGLNLTT-ASRAFMMDPWWSPS 1121 Query: 143 EHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 Q I+R+ + G V V I ++I+ +L+ K I + + Sbjct: 1122 VEDQAIDRL-----HRIGQNSNVKVTRFIMADSIETKMLKIQERKKQIGEAV 1168 >gi|195496271|ref|XP_002095622.1| GE19602 [Drosophila yakuba] gi|194181723|gb|EDW95334.1| GE19602 [Drosophila yakuba] Length = 899 Score = 90.8 bits (224), Expect = 9e-17, Method: Composition-based stats. Identities = 26/153 (16%), Positives = 57/153 (37%), Gaps = 20/153 (13%) Query: 52 HDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFP----QGRTLDK------DPC 99 K+ L ++++ A+ +++ L L+ Q LD Sbjct: 585 ASGKLDLLSKMLKQLKADHHRVLIFSQMTKMLNILEDFLEGEGYQYERLDGNIRGDLRQE 644 Query: 100 TIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 I +N K + + G G+NL + ++ F W+ Q +R Sbjct: 645 AIDRFNAPKAEQFVFLLSTRAGGLGINL-ATADTVILFDSDWNPHNDVQA-----FSRAH 698 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 + G + V +Y + N+++E ++Q ++ K + Sbjct: 699 RMGQTKKVMIYRFVTHNSVEERIMQVVKHKMML 731 >gi|242038313|ref|XP_002466551.1| hypothetical protein SORBIDRAFT_01g009790 [Sorghum bicolor] gi|241920405|gb|EER93549.1| hypothetical protein SORBIDRAFT_01g009790 [Sorghum bicolor] Length = 836 Score = 90.8 bits (224), Expect = 9e-17, Method: Composition-based stats. Identities = 23/142 (16%), Positives = 55/142 (38%), Gaps = 18/142 (12%) Query: 66 ANAAPIIVAYHFNSDLARLQK----------AFPQGRTLDKDPCTIQEWN--EGKIPLLF 113 A +++ + L L+ L++ I E+N + + Sbjct: 610 ARKHKVLIFSQWTKVLDILEYYLDSKGLGVCRIDGSVNLEERRRQIAEFNDVNSSLNVFI 669 Query: 114 AHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQ 173 + G G+NL + + + W+ + Q ++R + G R V VY L Sbjct: 670 LSTRAGGLGINLT-SADTCILYDSDWNPQMDLQAMDRC-----HRIGQTRPVHVYRLATS 723 Query: 174 NTIDELVLQRLRTKSTIQDLLL 195 ++++E +++R K ++ +++ Sbjct: 724 HSVEERIIKRAFGKLKLEHVVI 745 >gi|239945590|ref|ZP_04697527.1| hypothetical protein SrosN15_31682 [Streptomyces roseosporus NRRL 15998] Length = 720 Score = 90.8 bits (224), Expect = 9e-17, Method: Composition-based stats. Identities = 32/191 (16%), Positives = 74/191 (38%), Gaps = 24/191 (12%) Query: 14 DLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKA--NAAPI 71 + E+ EA+ A + + +++ A + K++ L ++ +A N + Sbjct: 502 EFGAEDREAYGEAVASGRFMRMRRAA-------YAVPKTSAKLERLRELVGEARDNGLKV 554 Query: 72 IVAYHFNSDLARLQKAF--------PQGRTLDKDPCTIQEWNE-GKIPLLFAHPASCGHG 122 +V +F LA + A + + ++ +L + + G G Sbjct: 555 VVFSYFREVLAAIGDALGPDVFGPLSGSVPPARRQELVDAFSSVAGHAVLLSQIQAGGTG 614 Query: 123 LNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQ 182 LN+Q ++++ Q + R + G R V V+ L+A +++D+ +++ Sbjct: 615 LNMQ-AASVVILCEPQIKPTLEHQAVAR-----AHRMGQVRTVQVHRLLATDSVDQRLVE 668 Query: 183 RLRTKSTIQDL 193 L K + D Sbjct: 669 LLARKDRLFDA 679 >gi|114658989|ref|XP_001170614.1| PREDICTED: chromodomain helicase DNA binding protein 2 isoform 1 [Pan troglodytes] Length = 1531 Score = 90.8 bits (224), Expect = 9e-17, Method: Composition-based stats. Identities = 25/161 (15%), Positives = 59/161 (36%), Gaps = 20/161 (12%) Query: 52 HDEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQKAF---------PQGRTLDK-DPC 99 K+ L+ ++ + +++ L L + G + Sbjct: 789 SSGKLILLDKLLTRLRERGNRVLIFSQMVRMLDILAEYLTIKHYPFQRLDGSIKGEIRKQ 848 Query: 100 TIQEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 + +N + + G G+NL + +V F W+ + Q R Sbjct: 849 ALDHFNADGSEDFCFLLSTRAGGLGINL-ASADTVVIFDSDWNPQNDLQAQAR-----AH 902 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNAL 198 + G K+ V +Y L+ + T++E +++R + K + L++ + Sbjct: 903 RIGQKKQVNIYRLVTKGTVEEEIIERAKKKMVLDHLVIQRM 943 >gi|50310529|ref|XP_455284.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140] gi|49644420|emb|CAG97992.1| KLLA0F04521p [Kluyveromyces lactis] Length = 1344 Score = 90.8 bits (224), Expect = 9e-17, Method: Composition-based stats. Identities = 42/227 (18%), Positives = 82/227 (36%), Gaps = 35/227 (15%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASK--TVKCLQL---ANGAVYYDEEKHWKEVH---- 52 + Y + + + A + K K +QL N +DE ++ Sbjct: 767 QLYEQMLKHNAFFIGAGTEGATKAGIKGLNNKVMQLRKICNHPFVFDEVENVINPTRENS 826 Query: 53 ------DEKIKALEVIIEK--ANAAPIIVAYH------FNSDLAR---LQKAFPQGRTLD 95 K + L+ ++ K A+ +++ + D R L+ G T Sbjct: 827 SILYRVSGKFELLDRVLPKFKASGHRVLMFFQMTQVMDIMEDFLRMRDLKYMRLDGGTKA 886 Query: 96 KDPC-TIQEWNEGKIPLL--FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIG 152 +D ++ +N + G GLNLQ + ++ F W+ + Q Sbjct: 887 EDRTGMLKLFNAPDSEYFCFLLSTRAGGLGLNLQT-ADTVIIFDTDWNPHQDLQA----- 940 Query: 153 VTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 R + G K V + LI ++++E++L+R K I ++ A K Sbjct: 941 QDRAHRIGQKNEVRILRLITTDSVEEVILERAMQKLDIDGKVIQAGK 987 >gi|255072471|ref|XP_002499910.1| SNF2 super family [Micromonas sp. RCC299] gi|226515172|gb|ACO61168.1| SNF2 super family [Micromonas sp. RCC299] Length = 1201 Score = 90.8 bits (224), Expect = 9e-17, Method: Composition-based stats. Identities = 27/149 (18%), Positives = 50/149 (33%), Gaps = 20/149 (13%) Query: 56 IKALEVI-IEKANAAP---IIVAYHFNSDLARLQKAFPQG----------RTLDKDPCTI 101 + L I E P +V F L + + L + + Sbjct: 986 LDELAAIRAEARPGTPPTQCVVFSQFTKFLDIIGPKIEDAGHAVLRLDGTQRLSQRARVV 1045 Query: 102 QEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGF 161 ++ G+ +L + GLNL + ++ WW+ Q I+R + G Sbjct: 1046 AKFRRGEAGVLLVSLKAASLGLNLNC-ASRVILTDPWWNAAIEDQAIDRC-----HRIGQ 1099 Query: 162 KRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 R V V L+ ++T++ + K I Sbjct: 1100 TREVKVTRLLIRDTVENRIRDLQERKKAI 1128 >gi|154277776|ref|XP_001539721.1| hypothetical protein HCAG_05188 [Ajellomyces capsulatus NAm1] gi|150413306|gb|EDN08689.1| hypothetical protein HCAG_05188 [Ajellomyces capsulatus NAm1] Length = 1162 Score = 90.8 bits (224), Expect = 9e-17, Method: Composition-based stats. Identities = 28/160 (17%), Positives = 58/160 (36%), Gaps = 26/160 (16%) Query: 51 VHDEKIKALEVI-------IEKANAAPI--IVAYHFNSDLARLQKAFPQ----------- 90 V KI+ I I + + P IV F S L LQ + Sbjct: 1003 VTSAKIEKTMEILRDIQSRIPEGDDKPEKTIVFSQFTSLLDLLQVPIEREGWGYCRYDGS 1062 Query: 91 GRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 + ++ ++ + ++ + GLNL + ++ +W+ +Q I+R Sbjct: 1063 MQPSHRNEAVLRFSDSQNHTIMLISLKAGNSGLNL-VAASQVIILDPFWNPYLEEQAIDR 1121 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 + G R V V+ ++ T+++ +L+ K + Sbjct: 1122 -----AHRIGQMRPVMVHRILVHKTVEDRILELQDRKRAL 1156 >gi|50289267|ref|XP_447064.1| hypothetical protein [Candida glabrata CBS 138] gi|49526373|emb|CAG59997.1| unnamed protein product [Candida glabrata] Length = 1126 Score = 90.8 bits (224), Expect = 9e-17, Method: Composition-based stats. Identities = 28/163 (17%), Positives = 65/163 (39%), Gaps = 20/163 (12%) Query: 46 KHWKEVHDEKIKALEVIIEKA---NAAPIIVAYHFNSDLARLQK----------AFPQGR 92 K+ + ++ K+ AL+ +++ +++ F L L+K Sbjct: 941 KNDEWMNSGKVDALKKLLDDIINKKREKVLIFTLFTQVLDILEKVLSTLNYKFLRLDGST 1000 Query: 93 TLDKDPCTIQEWNEGK-IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERI 151 ++ I ++ + IP+ + G G+NL ++++F + +R Sbjct: 1001 QVNDRQTMIDKFYDDNTIPIFMLSTRAGGFGINLVCANHVIIFD------QSFNPHDDRQ 1054 Query: 152 GVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 R + G + V V LI +++I+E + Q +TK + + Sbjct: 1055 AADRAHRVGQTKEVTVTTLITKDSIEEKIFQLAKTKLALDSQV 1097 >gi|327300573|ref|XP_003234979.1| RSC complex subunit Sth1 [Trichophyton rubrum CBS 118892] gi|326462331|gb|EGD87784.1| RSC complex subunit Sth1 [Trichophyton rubrum CBS 118892] Length = 1352 Score = 90.8 bits (224), Expect = 9e-17, Method: Composition-based stats. Identities = 39/225 (17%), Positives = 77/225 (34%), Gaps = 33/225 (14%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQL---ANGAVYYDE----------EKHW 48 K Y + + + +QL N +D Sbjct: 778 KLYKQLVTHNKLAVSDGKGGKTPVRGLSNMLMQLRKLCNHPFVFDSVEEELNPGKATNDL 837 Query: 49 KEVHDEKIKALEVIIEK--ANAAPIIVAYH------FNSDLAR---LQKAFPQGRTLDKD 97 K + L+ I+ K A+ +++ + D R ++ G T D Sbjct: 838 IWRTAGKFELLDRILPKFFASGHRVLMFFQMTQIMNIMEDFMRFRGMKYLRLDGATKSDD 897 Query: 98 PCTI-QEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 + + +NE + + G GLNLQ + ++ + W+ + Q Sbjct: 898 RSDLLRRFNEPGSEYFCFLLSTRAGGLGLNLQT-ADTVIIYDSDWNPHQDLQA-----QD 951 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 R + G K V + LI+ N+++E +L+R + K + ++ A K Sbjct: 952 RAHRIGQKNEVRILRLISSNSVEERILERAQFKLDMDGKVIQAGK 996 >gi|258573727|ref|XP_002541045.1| chromatin remodelling complex ATPase chain ISW1 [Uncinocarpus reesii 1704] gi|237901311|gb|EEP75712.1| chromatin remodelling complex ATPase chain ISW1 [Uncinocarpus reesii 1704] Length = 994 Score = 90.8 bits (224), Expect = 9e-17, Method: Composition-based stats. Identities = 40/231 (17%), Positives = 87/231 (37%), Gaps = 43/231 (18%) Query: 6 KFQRELYCDLQGENIEAFNSAS--------KTVKCLQLAN-------------GAVYYDE 44 + Q + Y + ++I+A N A +QL G Y + Sbjct: 303 EMQVKWYQKILEKDIDAVNGAQGKRESKTRLLNIVMQLRKCCNHPYLFEGAEPGPPYTTD 362 Query: 45 EKHWKEVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQ---------KAFPQGRT 93 E + K+ L+ ++++ + +++ + L L+ G T Sbjct: 363 EHLV--DNAGKMVILDKLLKRLKVQGSRVLIFSQMSRVLDILEDYCVFREHAYCRIDGST 420 Query: 94 LDKDP-CTIQEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 +D I E+N + + + G G+NL +I++ + W+ + Q ++R Sbjct: 421 AHEDRIAAIDEYNRPGSEKFVFLLTTRAGGLGINLTT-ADIVILYDSDWNPQADLQAMDR 479 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 + G + V V+ + +N I+E VL+R K + L++ + + Sbjct: 480 -----AHRIGQTKQVVVFRFVTENAIEEKVLERAAQKLRLDQLVIQQGRAQ 525 >gi|221508955|gb|EEE34524.1| chromatin remodelling complex protein SNF2L, putative [Toxoplasma gondii VEG] Length = 1551 Score = 90.8 bits (224), Expect = 9e-17, Method: Composition-based stats. Identities = 44/222 (19%), Positives = 87/222 (39%), Gaps = 38/222 (17%) Query: 6 KFQRELYCDLQGENIEAFNSAS-----KTVKCLQL---ANGAVYYD---------EEKHW 48 K Q++LY D+ +N+E N+ S +QL N +D E +H Sbjct: 441 KLQKKLYADILSKNVEVLNAMSGSKTQMLNILMQLRKCCNHPYLFDGVEPGPPYVEGEHM 500 Query: 49 KEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQ---------KAFPQGRTLDKD 97 E K+ L+ ++ + A + +++ L + G T + Sbjct: 501 VEAA-GKMALLDKLLPRLKAEGSRVLLFSQMTRLLDIVDDYCRWRGFDYCRIDGGTPGTE 559 Query: 98 PCT-IQEWNE--GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 I E+N K L + G G+NL +I++ F ++ + Q ++R Sbjct: 560 RQERIDEFNAEGSKKFLFLLSTRAGGLGINL-ATADIVILFDSDFNPQMDLQAMDR---- 614 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + G K+ V VY + +T++ +++R K + L++ Sbjct: 615 -AHRIGQKKRVVVYRFVTGDTVEAKIVERAAKKLKLDSLVIQ 655 >gi|237833381|ref|XP_002365988.1| chromatin remodeling complex protein SNF2L, putative [Toxoplasma gondii ME49] gi|211963652|gb|EEA98847.1| chromatin remodeling complex protein SNF2L, putative [Toxoplasma gondii ME49] Length = 1556 Score = 90.8 bits (224), Expect = 9e-17, Method: Composition-based stats. Identities = 44/222 (19%), Positives = 87/222 (39%), Gaps = 38/222 (17%) Query: 6 KFQRELYCDLQGENIEAFNSAS-----KTVKCLQL---ANGAVYYD---------EEKHW 48 K Q++LY D+ +N+E N+ S +QL N +D E +H Sbjct: 441 KLQKKLYADILSKNVEVLNAMSGSKTQMLNILMQLRKCCNHPYLFDGVEPGPPYVEGEHM 500 Query: 49 KEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQ---------KAFPQGRTLDKD 97 E K+ L+ ++ + A + +++ L + G T + Sbjct: 501 VEAA-GKMALLDKLLPRLKAEGSRVLLFSQMTRLLDIVDDYCRWRGFDYCRIDGGTPGTE 559 Query: 98 PCT-IQEWNE--GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 I E+N K L + G G+NL +I++ F ++ + Q ++R Sbjct: 560 RQERIDEFNAEGSKKFLFLLSTRAGGLGINL-ATADIVILFDSDFNPQMDLQAMDR---- 614 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + G K+ V VY + +T++ +++R K + L++ Sbjct: 615 -AHRIGQKKRVVVYRFVTGDTVEAKIVERAAKKLKLDSLVIQ 655 >gi|225436359|ref|XP_002270098.1| PREDICTED: hypothetical protein isoform 2 [Vitis vinifera] Length = 1016 Score = 90.8 bits (224), Expect = 9e-17, Method: Composition-based stats. Identities = 33/164 (20%), Positives = 57/164 (34%), Gaps = 17/164 (10%) Query: 36 ANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQ---------- 85 D EK+W E LE+ + + I+ + + L LQ Sbjct: 834 TGSRFQIDVEKNWMESSKVAALLLELENLCSVGSKSILFSQWTAFLDLLQIPLSRSNISF 893 Query: 86 KAFPQGRTLDKDPCTIQEW-NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEH 144 + I+++ E I +L + G G+NL N V WW+ Sbjct: 894 VRLDGTLNQQQREKVIKQFSEESNILVLLMSLKAGGVGINLTAASNAFVL-DPWWNPAVE 952 Query: 145 QQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKS 188 +Q + RI + G + V + I + T++E +L K Sbjct: 953 EQAVMRI-----HRIGQTKRVMIKRFIVKGTVEERMLAVQARKQ 991 >gi|225436357|ref|XP_002270070.1| PREDICTED: hypothetical protein isoform 1 [Vitis vinifera] Length = 1036 Score = 90.8 bits (224), Expect = 9e-17, Method: Composition-based stats. Identities = 33/164 (20%), Positives = 57/164 (34%), Gaps = 17/164 (10%) Query: 36 ANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQ---------- 85 D EK+W E LE+ + + I+ + + L LQ Sbjct: 854 TGSRFQIDVEKNWMESSKVAALLLELENLCSVGSKSILFSQWTAFLDLLQIPLSRSNISF 913 Query: 86 KAFPQGRTLDKDPCTIQEW-NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEH 144 + I+++ E I +L + G G+NL N V WW+ Sbjct: 914 VRLDGTLNQQQREKVIKQFSEESNILVLLMSLKAGGVGINLTAASNAFVL-DPWWNPAVE 972 Query: 145 QQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKS 188 +Q + RI + G + V + I + T++E +L K Sbjct: 973 EQAVMRI-----HRIGQTKRVMIKRFIVKGTVEERMLAVQARKQ 1011 >gi|296417576|ref|XP_002838429.1| hypothetical protein [Tuber melanosporum Mel28] gi|295634367|emb|CAZ82620.1| unnamed protein product [Tuber melanosporum] Length = 1062 Score = 90.8 bits (224), Expect = 1e-16, Method: Composition-based stats. Identities = 28/150 (18%), Positives = 59/150 (39%), Gaps = 17/150 (11%) Query: 66 ANAAPIIVAYHFNSDLARLQ----------KAFPQGRTLDKDPCTIQEW-NEGKIPLLFA 114 ++A IV F S L ++ + + G T + E+ ++ + ++ Sbjct: 903 SSAKKTIVFSQFTSLLDLIEIPIHQKGWTYRRYDGGMTSTARNEALTEFTDDPSVNIILV 962 Query: 115 HPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQN 174 + GLNL + ++ +++ Q I+R + G +R V V+ LI Sbjct: 963 SLKAGNSGLNL-VAASQVIILDPFYNPFIENQAIDR-----AHRIGQQRKVRVHKLIVAG 1016 Query: 175 TIDELVLQRLRTKSTIQDLLLNALKKETIH 204 T+++ VL K + + L+ + I Sbjct: 1017 TVEDRVLALQEEKRKLIEGALDEKASQGIG 1046 >gi|167533758|ref|XP_001748558.1| hypothetical protein [Monosiga brevicollis MX1] gi|163773077|gb|EDQ86722.1| predicted protein [Monosiga brevicollis MX1] Length = 692 Score = 90.8 bits (224), Expect = 1e-16, Method: Composition-based stats. Identities = 32/145 (22%), Positives = 57/145 (39%), Gaps = 20/145 (13%) Query: 67 NAAPIIVAYHFNSDLARLQ-------------KAFPQGRTLDKDPCTIQEWNE-GKIPLL 112 ++ + L +Q + G + + E+NE I +L Sbjct: 487 GRHRALIFAQQRAFLDIVQEELLDKHLPEVTYRRLDGGVPAQQRHDIVVEFNEDPSIDVL 546 Query: 113 FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIA 172 + G GL L G + ++F W+ + Q ++R + G R V VY LI Sbjct: 547 LLTTSVGGLGLTLT-GADTVIFLEHDWNPMKDLQAMDR-----AHRLGQTRVVNVYRLIT 600 Query: 173 QNTIDELVLQRLRTKSTIQDLLLNA 197 Q T++E ++ R K + D ++NA Sbjct: 601 QRTLEEKIMSLQRFKINVADTVVNA 625 >gi|297734859|emb|CBI17093.3| unnamed protein product [Vitis vinifera] Length = 1025 Score = 90.8 bits (224), Expect = 1e-16, Method: Composition-based stats. Identities = 33/164 (20%), Positives = 57/164 (34%), Gaps = 17/164 (10%) Query: 36 ANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQ---------- 85 D EK+W E LE+ + + I+ + + L LQ Sbjct: 843 TGSRFQIDVEKNWMESSKVAALLLELENLCSVGSKSILFSQWTAFLDLLQIPLSRSNISF 902 Query: 86 KAFPQGRTLDKDPCTIQEW-NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEH 144 + I+++ E I +L + G G+NL N V WW+ Sbjct: 903 VRLDGTLNQQQREKVIKQFSEESNILVLLMSLKAGGVGINLTAASNAFVL-DPWWNPAVE 961 Query: 145 QQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKS 188 +Q + RI + G + V + I + T++E +L K Sbjct: 962 EQAVMRI-----HRIGQTKRVMIKRFIVKGTVEERMLAVQARKQ 1000 >gi|300797826|ref|NP_001178272.1| DNA excision repair protein ERCC-6 [Bos taurus] Length = 1481 Score = 90.8 bits (224), Expect = 1e-16, Method: Composition-based stats. Identities = 34/172 (19%), Positives = 62/172 (36%), Gaps = 21/172 (12%) Query: 43 DEEKHWKEVHDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQK----------AFPQ 90 D+ +WK K+ +E +++ +++ L L+ Sbjct: 820 DQFGYWKR--SGKMIVVESLLKIWHKQGQRVLLFSQSRQMLDILEVFLRAQKYSYLKMDG 877 Query: 91 GRTLDKDPCTIQEWNEG-KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIE 149 + I +NE I + G G+NL G N ++ + W+ Q E Sbjct: 878 TTAIASRQPLITRYNEDTSIFVFLLTTRVGGLGVNLT-GANRVIIYDPDWNPSTDTQARE 936 Query: 150 RIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 R + G K+ V VY L+ TI+E + R K + + +L K+ Sbjct: 937 RAW-----RIGQKKQVTVYRLLTAGTIEEKIYHRQIFKQFLTNRVLKDPKQR 983 >gi|149235383|ref|XP_001523570.1| DNA repair and recombination protein RAD26 [Lodderomyces elongisporus NRRL YB-4239] gi|146452979|gb|EDK47235.1| DNA repair and recombination protein RAD26 [Lodderomyces elongisporus NRRL YB-4239] Length = 1159 Score = 90.8 bits (224), Expect = 1e-16, Method: Composition-based stats. Identities = 30/186 (16%), Positives = 67/186 (36%), Gaps = 33/186 (17%) Query: 39 AVYYDEEKHWKEVHDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQK---------- 86 A Y D K K++ L+ +++ ++ ++ L L+K Sbjct: 664 ANYGDPSK------SGKMQVLKNLLQLWQSEDHKTLLFCQTRQMLDILEKFVANLHLLGD 717 Query: 87 --------AFPQGRTLDKDPCTIQEWNE-GKIPLLFAHPASCGHGLNLQYGGNILVFFSL 137 + + + +N + + G G+NL G + ++ + Sbjct: 718 ESKKFNYLRMDGNTPISRRQQLVDTFNNSPDLHVFLLTTKVGGLGVNLT-GADRVIIYDP 776 Query: 138 WWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 W+ Q ER + G K+ + +Y L+ +I+E + R K+ +Q+ +L Sbjct: 777 DWNPSTDIQARERAW-----RLGQKKDITIYRLMTTGSIEEKIYHRQIFKTFLQNKILKD 831 Query: 198 LKKETI 203 K+ + Sbjct: 832 PKQRRL 837 >gi|146081503|ref|XP_001464269.1| DNA excision repair protein [Leishmania infantum JPCM5] gi|134068360|emb|CAM66648.1| putative DNA excision repair protein [Leishmania infantum JPCM5] Length = 1261 Score = 90.8 bits (224), Expect = 1e-16, Method: Composition-based stats. Identities = 33/165 (20%), Positives = 60/165 (36%), Gaps = 19/165 (11%) Query: 44 EEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQK----------AFPQG 91 + K+ AL +++++ + ++V L ++ Sbjct: 851 SNNPVDLLGSGKLNALLMMLKEWQSFGHRVLVFSQTRMMLDIIENMCEQQAYRYIRMDGA 910 Query: 92 RTLDKDPCTIQEWNEG-KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 + +NE I + G G+NL G + +V F W+ Q ER Sbjct: 911 TNSHYRQELMDRFNEDVSIFVALLTTRVGGIGVNL-IGADRVVIFDPDWNPITDVQARER 969 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 + G KR V VY LI +++E +L+R K + D +L Sbjct: 970 AW-----RIGQKREVCVYRLITSGSVEESILRRQLAKMYVTDKVL 1009 >gi|50290467|ref|XP_447665.1| hypothetical protein [Candida glabrata CBS 138] gi|49526975|emb|CAG60602.1| unnamed protein product [Candida glabrata] Length = 1039 Score = 90.8 bits (224), Expect = 1e-16, Method: Composition-based stats. Identities = 43/226 (19%), Positives = 85/226 (37%), Gaps = 43/226 (19%) Query: 6 KFQRELYCDLQGENIEAFNSAS--------KTVKCLQLAN-------------GAVYYDE 44 Q + Y L ++I+A N A +QL G Y + Sbjct: 372 DMQVQWYKSLLEKDIDAVNGAVGKREGKTRLLNIVMQLRKCCNHPYLFEGAEPGPPYTTD 431 Query: 45 EKHWKEVHDEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQ---------KAFPQGRT 93 E + K+ L+ ++++ + +++ + L L+ G T Sbjct: 432 EHLI--FNAGKMIVLDKLLKRLKEKGSRVLIFSQMSRLLDILEDYCYFRNYNYCRIDGST 489 Query: 94 LDKDPCT-IQEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 ++ I E+N+ + + + G G+NL + +V F W+ + Q ++R Sbjct: 490 SHEERIDAIDEYNKPNSEKFVFLLTTRAGGLGINL-VTADTVVLFDSDWNPQADLQAMDR 548 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + G K+ V VY + +N I+E VL+R K + L++ Sbjct: 549 -----AHRIGQKKQVHVYRFVTENAIEEKVLERAAQKLRLDQLVIQ 589 >gi|83766213|dbj|BAE56356.1| unnamed protein product [Aspergillus oryzae] Length = 1026 Score = 90.8 bits (224), Expect = 1e-16, Method: Composition-based stats. Identities = 35/162 (21%), Positives = 66/162 (40%), Gaps = 19/162 (11%) Query: 46 KHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFP---------QGRTL 94 K+ + + KI L ++++ N ++ F + L+ GRT Sbjct: 836 KNNEWMDSGKIDKLCELLKRFKENGDRTLIFSQFTMVMDILEHVLENQHLGFVRLDGRTN 895 Query: 95 DKDPCTI-QEWNEG-KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIG 152 +D +I ++E IP+ + G G+NL N +V F ++ +E Q Sbjct: 896 VEDRQSILDAFHERTDIPVFLLSTKAGGAGINL-ACANKVVIFDSSFNPQEDVQA----- 949 Query: 153 VTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 R + G R V V L+ ++TI+E + +TK + + Sbjct: 950 ENRAHRVGQTREVEVIRLVTKDTIEEQIYALGQTKLALDQAV 991 >gi|301785221|ref|XP_002928025.1| PREDICTED: chromodomain-helicase-DNA-binding protein 2-like, partial [Ailuropoda melanoleuca] Length = 1114 Score = 90.8 bits (224), Expect = 1e-16, Method: Composition-based stats. Identities = 25/161 (15%), Positives = 59/161 (36%), Gaps = 20/161 (12%) Query: 52 HDEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQKAF---------PQGRTLDK-DPC 99 K+ L+ ++ + +++ L L + G + Sbjct: 776 SSGKLILLDKLLTRLRERGNRVLIFSQMVRMLDILAEYLTIKHYPFQRLDGSIKGEIRKQ 835 Query: 100 TIQEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 + +N + + G G+NL + +V F W+ + Q R Sbjct: 836 ALDHFNADGSEDFCFLLSTRAGGLGINL-ASADTVVIFDSDWNPQNDLQAQAR-----AH 889 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNAL 198 + G K+ V +Y L+ + T++E +++R + K + L++ + Sbjct: 890 RIGQKKQVNIYRLVTKGTVEEEIIERAKKKMVLDHLVIQRM 930 >gi|151946631|gb|EDN64853.1| ATPase component of a four subunit chromatin remodeling complex [Saccharomyces cerevisiae YJM789] gi|190408605|gb|EDV11870.1| ATPase component of a four subunit chromatin remodeling complex [Saccharomyces cerevisiae RM11-1a] Length = 1129 Score = 90.8 bits (224), Expect = 1e-16, Method: Composition-based stats. Identities = 36/223 (16%), Positives = 82/223 (36%), Gaps = 39/223 (17%) Query: 7 FQRELYCDLQGENIEAFNSAS--------KTVKCLQLAN-------------GAVYYDEE 45 Q++ Y + ++++A N ++ +QL G Y +E Sbjct: 436 MQKKWYKKILEKDLDAVNGSNGSKESKTRLLNIMMQLRKCCNHPYLFDGAEPGPPYTTDE 495 Query: 46 KHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQ---------KAFPQGRTLDK 96 ++ + K + +++ + L L+ G T + Sbjct: 496 HLVYNAAKLQVLDKLLKKLKEEGSRVLIFSQMSRLLDILEDYCYFRNYEYCRIDGSTAHE 555 Query: 97 DP-CTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGV 153 D I ++N + + G G+NL +++V + W+ + Q ++R Sbjct: 556 DRIQAIDDYNAPDSKKFVFLLTTRAGGLGINLT-SADVVVLYDSDWNPQADLQAMDR--- 611 Query: 154 TRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + G K+ V V+ L+ N+++E +L+R K + L++ Sbjct: 612 --AHRIGQKKQVKVFRLVTDNSVEEKILERATQKLRLDQLVIQ 652 >gi|42561667|ref|NP_171871.2| SWI2 (SWITCH 2); ATP binding / DNA binding / helicase/ nucleic acid binding [Arabidopsis thaliana] gi|332189485|gb|AEE27606.1| switch 2 [Arabidopsis thaliana] Length = 862 Score = 90.8 bits (224), Expect = 1e-16, Method: Composition-based stats. Identities = 35/163 (21%), Positives = 64/163 (39%), Gaps = 20/163 (12%) Query: 55 KIKALEVIIEK--ANAAPIIVAYHFNSDLARLQK----------AFPQGRTLDKDPCTIQ 102 K++ALE ++ + I++ + L L+K + + Sbjct: 529 KMRALEKLMASWISKGDKILLFSYSVRMLDILEKFLIRKGYSFARLDGSTPTNLRQSLVD 588 Query: 103 EWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGF 161 ++N + + G GLNL N +V F W+ Q R + G Sbjct: 589 DFNASPSKQVFLISTKAGGLGLNL-VSANRVVIFDPNWNPSHDLQA-----QDRSFRYGQ 642 Query: 162 KRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIH 204 KR V V+ L++ +++ELV R K + ++ + A K ET + Sbjct: 643 KRHVVVFRLLSAGSLEELVYTRQVYKQQLSNIAV-AGKMETRY 684 >gi|29829734|ref|NP_824368.1| bifunctional protein [Streptomyces avermitilis MA-4680] gi|15824163|dbj|BAB69326.1| putative bifunctional protein [Streptomyces avermitilis] gi|29606843|dbj|BAC70903.1| putative bifunctional protein [Streptomyces avermitilis MA-4680] Length = 701 Score = 90.8 bits (224), Expect = 1e-16, Method: Composition-based stats. Identities = 40/191 (20%), Positives = 79/191 (41%), Gaps = 24/191 (12%) Query: 14 DLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKA--NAAPI 71 +L + +A+ A + + A Y D EK K+ L ++ +A N + Sbjct: 477 ELSAADRDAYRKAVAEGNFMAMRRAA-YADAEK------SAKLGRLRELVAEAADNGLKV 529 Query: 72 IVAYHFNSDLARLQKAFPQ--------GRTLDKDPCTIQEWNEGK-IPLLFAHPASCGHG 122 +V +F LA +Q+ + G + + + +L A + G G Sbjct: 530 VVFSYFREVLATVQQCLGEPVLGPISGGVPAARRQRLVDAFAAIDGHAVLLAQIEAGGTG 589 Query: 123 LNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQ 182 LNLQ ++++ + + +E V R + G R V V+ L+A +++D+ +L+ Sbjct: 590 LNLQ-AASVVILCEP-----QVKPTMEHQAVARAHRMGQIRTVQVHRLLATDSVDDRLLR 643 Query: 183 RLRTKSTIQDL 193 L+ K + D Sbjct: 644 ILKNKDRLFDA 654 >gi|322497673|emb|CBZ32748.1| unnamed protein product [Leishmania donovani BPK282A1] Length = 1262 Score = 90.8 bits (224), Expect = 1e-16, Method: Composition-based stats. Identities = 33/165 (20%), Positives = 60/165 (36%), Gaps = 19/165 (11%) Query: 44 EEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQK----------AFPQG 91 + K+ AL +++++ + ++V L ++ Sbjct: 851 SNNPVDLLGSGKLNALLMMLKEWQSFGHRVLVFSQTRMMLDIIENMCEQQAYRYIRMDGA 910 Query: 92 RTLDKDPCTIQEWNEG-KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 + +NE I + G G+NL G + +V F W+ Q ER Sbjct: 911 TNSHYRQELMDRFNEDVSIFVALLTTRVGGIGVNL-IGADRVVIFDPDWNPITDVQARER 969 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 + G KR V VY LI +++E +L+R K + D +L Sbjct: 970 AW-----RIGQKREVCVYRLITSGSVEESILRRQLAKMYVTDKVL 1009 >gi|212529122|ref|XP_002144718.1| SNF2 family helicase/ATPase, putative [Penicillium marneffei ATCC 18224] gi|210074116|gb|EEA28203.1| SNF2 family helicase/ATPase, putative [Penicillium marneffei ATCC 18224] Length = 1043 Score = 90.8 bits (224), Expect = 1e-16, Method: Composition-based stats. Identities = 29/158 (18%), Positives = 59/158 (37%), Gaps = 18/158 (11%) Query: 52 HDEKIKALEVII-EKANAAPIIVAYHFNSDLARLQKAFPQG-----------RTLDKDPC 99 KI+AL I+ ++A IV F L +++ + R ++ Sbjct: 804 PSTKIRALIRILRKEAPEYKFIVFSVFTQMLDKIEPFLKRANLGYARYDGSMRNDLREAS 863 Query: 100 TIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQA 159 Q N +L + GLNL + +V +W+ +Q I+R+ + Sbjct: 864 LEQLRNRSSTRVLLCSLRAGALGLNLT-AASRVVILEPFWNPFVEEQAIDRV-----HRL 917 Query: 160 GFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 V +Y + +NT++E ++ K + + + Sbjct: 918 NQTIDVKIYKITVKNTVEERIIDLQERKRELANATIEG 955 >gi|157866587|ref|XP_001687685.1| DNA excision repair protein; SNF2 family helicase-like protein [Leishmania major strain Friedlin] gi|68125299|emb|CAJ03082.1| putative DNA excision repair protein [Leishmania major strain Friedlin] Length = 1252 Score = 90.8 bits (224), Expect = 1e-16, Method: Composition-based stats. Identities = 32/165 (19%), Positives = 60/165 (36%), Gaps = 19/165 (11%) Query: 44 EEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQK----------AFPQG 91 + K+ AL +++++ + ++V L ++ Sbjct: 839 SNNPVDLLGSGKLNALLMMLKEWQSFGHRVLVFSQTRIMLDIIENMCEQQAYSYIRMDGA 898 Query: 92 RTLDKDPCTIQEWNEGK-IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 + +NE I + G G+NL G + +V + W+ Q ER Sbjct: 899 TNSHYRQELMDRFNEDDSIFVALLTTRVGGIGVNL-IGADRVVIYDPDWNPITDVQARER 957 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 + G KR V VY LI +++E +L+R K + D +L Sbjct: 958 AW-----RIGQKREVCVYRLITSGSVEESILRRQLAKMYVTDKVL 997 >gi|6319722|ref|NP_009804.1| Isw1p [Saccharomyces cerevisiae S288c] gi|2506238|sp|P38144|ISW1_YEAST RecName: Full=ISWI chromatin-remodeling complex ATPase ISW1 gi|1872131|emb|CAA85208.1| unnamed protein product [Saccharomyces cerevisiae] gi|285810576|tpg|DAA07361.1| TPA: Isw1p [Saccharomyces cerevisiae S288c] Length = 1129 Score = 90.8 bits (224), Expect = 1e-16, Method: Composition-based stats. Identities = 36/223 (16%), Positives = 82/223 (36%), Gaps = 39/223 (17%) Query: 7 FQRELYCDLQGENIEAFNSAS--------KTVKCLQLAN-------------GAVYYDEE 45 Q++ Y + ++++A N ++ +QL G Y +E Sbjct: 436 MQKKWYKKILEKDLDAVNGSNGSKESKTRLLNIMMQLRKCCNHPYLFDGAEPGPPYTTDE 495 Query: 46 KHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQ---------KAFPQGRTLDK 96 ++ + K + +++ + L L+ G T + Sbjct: 496 HLVYNAAKLQVLDKLLKKLKEEGSRVLIFSQMSRLLDILEDYCYFRNYEYCRIDGSTAHE 555 Query: 97 DP-CTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGV 153 D I ++N + + G G+NL +++V + W+ + Q ++R Sbjct: 556 DRIQAIDDYNAPDSKKFVFLLTTRAGGLGINLT-SADVVVLYDSDWNPQADLQAMDR--- 611 Query: 154 TRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + G K+ V V+ L+ N+++E +L+R K + L++ Sbjct: 612 --AHRIGQKKQVKVFRLVTDNSVEEKILERATQKLRLDQLVIQ 652 >gi|121708629|ref|XP_001272195.1| chromatin remodeling complex subunit (Chd3), putative [Aspergillus clavatus NRRL 1] gi|119400343|gb|EAW10769.1| chromatin remodeling complex subunit (Chd3), putative [Aspergillus clavatus NRRL 1] Length = 1522 Score = 90.8 bits (224), Expect = 1e-16, Method: Composition-based stats. Identities = 26/161 (16%), Positives = 63/161 (39%), Gaps = 20/161 (12%) Query: 52 HDEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQKAFPQGRTLDKD----------PC 99 K++ L++++ K +++ F +L ++ L + Sbjct: 1004 ASGKLQLLQIMLPKLKERGHRVLIFSQFLDNLDIVEDFLDGLGLLHRRLDGRMNSLEKQK 1063 Query: 100 TIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 I E+N P S G G+NL + ++ ++ + Q + R Sbjct: 1064 RIDEYNAENSPYFAFLLSTRSGGVGINL-ATADTVIIMDPDFNPHQDMQALSR-----AH 1117 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNAL 198 + G K V V+ L+ + +++E ++Q + K + +L++ + Sbjct: 1118 RIGQKNKVLVFQLMTRGSVEEKIMQIGKKKMVLDHVLIDRM 1158 >gi|114600959|ref|XP_517850.2| PREDICTED: chromodomain helicase DNA binding protein 1 [Pan troglodytes] Length = 1710 Score = 90.8 bits (224), Expect = 1e-16, Method: Composition-based stats. Identities = 27/153 (17%), Positives = 56/153 (36%), Gaps = 21/153 (13%) Query: 68 AAPIIVAYHFNSDLARLQKAFP---------QGRTLDK-DPCTIQEWN-EGKIPL-LFAH 115 +++ L L + G + + +N EG Sbjct: 804 GNRVLIFSQMVRMLDILAEYLKYRQFPFQRLDGSIKGELRKQALDHFNAEGSEDFCFLLS 863 Query: 116 PASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNT 175 + G G+NL + +V F W+ + Q R + G K+ V +Y L+ + + Sbjct: 864 TRAGGLGINL-ASADTVVIFDSDWNPQNDLQAQAR-----AHRIGQKKQVNIYRLVTKGS 917 Query: 176 IDELVLQRLRTKSTIQDLL---LNALKKETIHV 205 ++E +L+R + K + L+ ++ K +H Sbjct: 918 VEEDILERAKKKMVLDHLVIQRMDTTGKTVLHT 950 >gi|183979219|dbj|BAG30707.1| decrease in DNA methylation 1 [Brassica rapa] Length = 767 Score = 90.8 bits (224), Expect = 1e-16, Method: Composition-based stats. Identities = 26/142 (18%), Positives = 57/142 (40%), Gaps = 18/142 (12%) Query: 66 ANAAPIIVAYHFNSDLARLQKAFPQ----------GRTLDKDPCTIQEWNEGK--IPLLF 113 A +++ + L + F + L++ IQE+N+ K + Sbjct: 541 AKNHRVLIFSQWTKILDIMDYYFSEKGFEVCRIDGSVKLEERRRQIQEFNDEKSNCRIFL 600 Query: 114 AHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQ 173 + G G+NL + + + W+ + Q ++R + G + V VY L Sbjct: 601 LSTRAGGLGINLT-AADTCILYDSDWNPQMDLQAMDRC-----HRIGQTKPVHVYRLATA 654 Query: 174 NTIDELVLQRLRTKSTIQDLLL 195 +I+ VL+R +K ++ +++ Sbjct: 655 QSIEGRVLKRAYSKLKLEHVVI 676 >gi|115959195|ref|XP_001193315.1| PREDICTED: similar to excision repair protein, partial [Strongylocentrotus purpuratus] Length = 953 Score = 90.8 bits (224), Expect = 1e-16, Method: Composition-based stats. Identities = 28/153 (18%), Positives = 59/153 (38%), Gaps = 18/153 (11%) Query: 55 KIKALEVIIE--KANAAPIIVAYHFNSDLARLQK---------AFPQGRTLDKDPCTIQE 103 K+ +E +++ K +++ L ++ T+ I + Sbjct: 332 KMIVVESLLKLWKEQNHRVLLFSQSKQMLDIMEDFVKDRYSYMRMDGTTTISSRQPLITK 391 Query: 104 WN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFK 162 +N + +I L G G+NL G N ++ + W+ Q ER + G Sbjct: 392 FNSDPRIFLFLLTTRVGGLGVNLT-GANRVIIYDPDWNPSTDTQARERSW-----RIGQT 445 Query: 163 RAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 + V +Y L+ +I+E + R K+ + + +L Sbjct: 446 KQVTIYRLLTAGSIEEKIYHRQIFKTFLTNRVL 478 >gi|323448278|gb|EGB04179.1| hypothetical protein AURANDRAFT_39128 [Aureococcus anophagefferens] Length = 711 Score = 90.8 bits (224), Expect = 1e-16, Method: Composition-based stats. Identities = 27/143 (18%), Positives = 52/143 (36%), Gaps = 18/143 (12%) Query: 65 KANAAPIIVAYHFN---SDLARLQ-------KAFPQGRTLDKDPCTIQEWNEG--KIPLL 112 K+ +++ F LA L + + +I +N+ + Sbjct: 315 KSEGRKVLIFSQFVRLLHLLAELCDTNGFMYERLDGTVKMAARQKSIDRFNDPCSDAFIF 374 Query: 113 FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIA 172 + G GLNLQ + +V F W+ + Q R + G + V VY L+A Sbjct: 375 LLSTRAGGVGLNLQ-AADTVVIFDSDWNPQNDVQAQARC-----HRLGQTKDVMVYRLVA 428 Query: 173 QNTIDELVLQRLRTKSTIQDLLL 195 + + + +R K ++ +L Sbjct: 429 SRSFEGEMFERASRKLGLEKAVL 451 >gi|226531237|ref|NP_001141865.1| chromatin complex subunit A [Zea mays] gi|194706224|gb|ACF87196.1| unknown [Zea mays] Length = 444 Score = 90.8 bits (224), Expect = 1e-16, Method: Composition-based stats. Identities = 33/189 (17%), Positives = 71/189 (37%), Gaps = 25/189 (13%) Query: 28 KTVKCLQLANGAVYYDEE-----KHWKEVHDEKIKALEVIIEKAN--AAPIIVAYHFNSD 80 +++ + N + E + K + L+ ++ K +++ Sbjct: 32 LSMQLRKCCNHPYLFVEHYNMYQREEIVRASGKFELLDRLLPKLQRAGHRVLLFSQMTKL 91 Query: 81 LARL---------QKAFPQGRTL-DKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYG 128 L L + G T ++ + ++N+ + + G GLNLQ Sbjct: 92 LDVLEIYLQMYNFKYMRLDGSTKTEERGRLLADFNKKDSEYFMFLLSTRAGGLGLNLQT- 150 Query: 129 GNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKS 188 + ++ F W+ + QQ +R + G K V V+ L++ +I+E +L R + K Sbjct: 151 ADTVIIFDSDWNPQMDQQAEDR-----AHRIGQKNEVRVFVLVSVGSIEEEILDRAKQKM 205 Query: 189 TIQDLLLNA 197 I ++ A Sbjct: 206 GIDAKVIQA 214 >gi|150865273|ref|XP_001384421.2| component of SWI/SNF global transcription activator complex [Scheffersomyces stipitis CBS 6054] gi|149386529|gb|ABN66392.2| component of SWI/SNF global transcription activator complex [Scheffersomyces stipitis CBS 6054] Length = 1566 Score = 90.8 bits (224), Expect = 1e-16, Method: Composition-based stats. Identities = 33/159 (20%), Positives = 61/159 (38%), Gaps = 20/159 (12%) Query: 55 KIKALEVIIEK--ANAAPIIVAYH------FNSDLARLQK----AFPQGRTLDKDPCTIQ 102 K + L+ I+ K +++ + D RL+ G D ++ Sbjct: 991 KFELLDKILPKFKTTGHRVLIFFQMTQIMDIMEDFLRLRGMKYMRLDGGTKADDRTALLK 1050 Query: 103 EWNEGKIPLL--FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 +N + G GLNLQ + +V F W+ + Q R + G Sbjct: 1051 LFNAPDSDYFCFLLSTRAGGLGLNLQT-ADTVVIFDTDWNPHQDLQA-----QDRAHRIG 1104 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 K V + LI +++++E++L+R K I ++ A K Sbjct: 1105 QKNEVRILRLITEDSVEEMILERAHAKLEIDGKVIQAGK 1143 >gi|24666729|ref|NP_649111.1| Chd3 [Drosophila melanogaster] gi|25089877|sp|O16102|CHD3_DROME RecName: Full=Chromodomain-helicase-DNA-binding protein 3; AltName: Full=ATP-dependent helicase Chd3 gi|23093148|gb|AAF49162.2| Chd3 [Drosophila melanogaster] Length = 892 Score = 90.8 bits (224), Expect = 1e-16, Method: Composition-based stats. Identities = 25/153 (16%), Positives = 59/153 (38%), Gaps = 20/153 (13%) Query: 52 HDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFP-QGRTLDK---------DPC 99 K+ L ++++ A+ +++ L L+ +G D+ Sbjct: 584 ASGKLDLLSKMLKQLKADNHRVLLFSQMTKMLNVLEHFLEGEGYQYDRIDGSIKGDLRQK 643 Query: 100 TIQEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 I +N+ + + + G G+NL + ++ F W+ Q +R Sbjct: 644 AIDRFNDPVSEHFVFLLSTRAGGLGINL-ATADTVIIFDSDWNPHNDVQA-----FSRAH 697 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 + G K+ V +Y + N+++E ++Q + K + Sbjct: 698 RMGQKKKVMIYRFVTHNSVEERIMQVAKHKMML 730 >gi|255723742|ref|XP_002546800.1| hypothetical protein CTRG_01105 [Candida tropicalis MYA-3404] gi|240134691|gb|EER34245.1| hypothetical protein CTRG_01105 [Candida tropicalis MYA-3404] Length = 475 Score = 90.8 bits (224), Expect = 1e-16, Method: Composition-based stats. Identities = 35/159 (22%), Positives = 59/159 (37%), Gaps = 26/159 (16%) Query: 52 HDEKIKAL----EVIIEKANAAPIIVAYHFNSDLARLQKAFP-----------QGRT-LD 95 KI+AL + + + + +V F+S L ++ GR ++ Sbjct: 298 SSSKIQALIRHLKNLHSQVPNSKAVVFSQFSSYLDIIETELKLASDDFIVFKFDGRLNMN 357 Query: 96 KDPCTIQEWN----EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERI 151 ++ +N GKI +L + G GLNL + WW Q I+RI Sbjct: 358 DRSKLLESFNKPLTNGKIAILLLSLRAGGVGLNLTT-ASRAFMMDPWWSPSVEDQAIDRI 416 Query: 152 GVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 + G V V I +N+I+ +L+ K I Sbjct: 417 -----HRIGQNETVKVVRFIMENSIETKMLKIQDLKKQI 450 >gi|50294289|ref|XP_449556.1| hypothetical protein [Candida glabrata CBS 138] gi|49528870|emb|CAG62532.1| unnamed protein product [Candida glabrata] Length = 1730 Score = 90.8 bits (224), Expect = 1e-16, Method: Composition-based stats. Identities = 41/226 (18%), Positives = 81/226 (35%), Gaps = 34/226 (15%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSA-SKTVKCLQL---ANG-AVYYDEEKHWKEVHDE-- 54 Y + + + + + +QL N V+ + E H D Sbjct: 1056 AMYQQMLKHKQLFIGDQKKNKLVGLRGFNNQLMQLKKICNHPFVFEEVEDHINPTRDTNM 1115 Query: 55 -------KIKALEVIIEK--ANAAPIIVAYHFNSDLAR---------LQKAFPQGRTL-D 95 K + LE I+ K A+ +++ + + ++ G T D Sbjct: 1116 NIWRVAGKFELLERILPKLKASRHRVLIFFQMTQIMDIMEDFLRYIDIKYLRLDGHTRSD 1175 Query: 96 KDPCTIQEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGV 153 + ++ +N+ + + G GLNLQ + ++ F W+ + Q Sbjct: 1176 ERGELLKLFNDPNSEYFCFILSTRAGGLGLNLQT-ADTVIIFDTDWNPHQDLQA-----Q 1229 Query: 154 TRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 R + G K V + LI N+++E++L+R K I ++ A K Sbjct: 1230 DRAHRIGQKNEVRIIRLITTNSVEEVILERAYKKLDIDGKVIQAGK 1275 >gi|71000114|ref|XP_754774.1| SNF2 family helicase/ATPase [Aspergillus fumigatus Af293] gi|66852411|gb|EAL92736.1| SNF2 family helicase/ATPase, putative [Aspergillus fumigatus Af293] gi|159127782|gb|EDP52897.1| SNF2 family helicase/ATPase, putative [Aspergillus fumigatus A1163] Length = 1133 Score = 90.8 bits (224), Expect = 1e-16, Method: Composition-based stats. Identities = 35/162 (21%), Positives = 67/162 (41%), Gaps = 19/162 (11%) Query: 46 KHWKEVHDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAFP---------QGRTL 94 K+ + ++ K+ L +++ + N +V F + L+ GRT Sbjct: 942 KNEEWMNSGKVDKLCELLKRFQENGDRTLVFSQFTLVMDILEHVLETLHLGFVRLDGRTN 1001 Query: 95 DKDPCTI-QEWNEG-KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIG 152 +D +I ++E IP+ + G G+NL N +V F ++ +E Q Sbjct: 1002 VEDRQSILDAFHERTDIPVFLLSTKAGGAGINL-ACANKVVIFDSSFNPQEDVQA----- 1055 Query: 153 VTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 R + G R V V L+ ++TI+E + +TK + + Sbjct: 1056 ENRAHRVGQTREVEVIRLVTKDTIEEQIYALGQTKLALDQAV 1097 >gi|67478494|ref|XP_654639.1| chromodomain-helicase-DNA-binding protein [Entamoeba histolytica HM-1:IMSS] gi|56471706|gb|EAL49253.1| chromodomain-helicase-DNA-binding protein, putative [Entamoeba histolytica HM-1:IMSS] Length = 1262 Score = 90.8 bits (224), Expect = 1e-16, Method: Composition-based stats. Identities = 21/147 (14%), Positives = 51/147 (34%), Gaps = 18/147 (12%) Query: 68 AAPIIVAYHFNSDLARLQ----------KAFPQGRTLDKDPCTIQEWNEGKIP--LLFAH 115 +++ L L + + + +N + Sbjct: 686 GHRVLIFSQMVRMLDVLSNYLHFRGFNYQRLDGAMGREARQRAMDHFNAKDSTDFVFLLS 745 Query: 116 PASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNT 175 + G G+NL + ++ + W+ + Q R + G ++ V +Y L + T Sbjct: 746 TRAGGLGINLTT-ADTVIIYDSDWNPQNDLQAQARC-----HRIGQEKTVNIYRLATEGT 799 Query: 176 IDELVLQRLRTKSTIQDLLLNALKKET 202 I+E +L + K + L++ ++K+ Sbjct: 800 IEEKILLSAKKKLVLDHLIIQTMEKKG 826 >gi|303289625|ref|XP_003064100.1| SNF2 super family [Micromonas pusilla CCMP1545] gi|226454416|gb|EEH51722.1| SNF2 super family [Micromonas pusilla CCMP1545] Length = 743 Score = 90.8 bits (224), Expect = 1e-16, Method: Composition-based stats. Identities = 30/211 (14%), Positives = 72/211 (34%), Gaps = 32/211 (15%) Query: 10 ELYCDLQGENIEAFNSASKTVKCLQLANGAVYYD----EEKHWKEVHDE--------KIK 57 E+ L G + S + +QL + D K + Sbjct: 431 EMLQKLSGG-VAPVGSTALNNMLMQLRKNCNHPDLISGGLDGSIMFPSAAELVEQCGKFR 489 Query: 58 ALEVIIEKAN--AAPIIVAYHFNSDLARLQKAFPQGRTL----------DKDPCTIQEWN 105 L+ I++K ++ L ++ F Q + + + +N Sbjct: 490 LLDRIMKKLRQRGHKTLIFSQMTKMLDLIESYFEQQGSRVCRIDGSVAWQERKEQMDAFN 549 Query: 106 -EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA 164 + + + + G G+NL + ++ + W+ + Q ++R + G + Sbjct: 550 TDPSVDIFLLSTRAGGLGINLT-AADTVIIYDSDWNPHQDMQAMDRC-----HRIGQTKP 603 Query: 165 VFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 V V L ++++ +L R +K ++ L++ Sbjct: 604 VHVLRLATAHSVEGKMLSRANSKLALEKLVI 634 >gi|209880656|ref|XP_002141767.1| SNF2 family N-terminal domain-containing protein [Cryptosporidium muris RN66] gi|209557373|gb|EEA07418.1| SNF2 family N-terminal domain-containing protein [Cryptosporidium muris RN66] Length = 851 Score = 90.8 bits (224), Expect = 1e-16, Method: Composition-based stats. Identities = 30/164 (18%), Positives = 62/164 (37%), Gaps = 18/164 (10%) Query: 44 EEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDL---ARLQK-------AFPQGRT 93 E + + L I ++ +++ ++ L RL + + Sbjct: 500 ESRPDISGKLYLLSRLLFQIRRSTDDRVVLVSNYTQTLDVFERLCRDLQVPCVRLDGSTS 559 Query: 94 LDKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERI 151 + K ++ +N+ + G G+NL G N LV F W+ +Q + R+ Sbjct: 560 ITKRHSMVKIFNDPNSNSFAFLLSSKAGGCGINL-IGANRLVMFDPDWNPANDKQALARV 618 Query: 152 GVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 + G K+ ++Y + TI+E + QR K + +L+ Sbjct: 619 W-----RDGQKKNCYIYRFFSTGTIEEKIYQRQLCKDGLSAMLV 657 >gi|121705194|ref|XP_001270860.1| SNF2 family helicase/ATPase, putative [Aspergillus clavatus NRRL 1] gi|119399006|gb|EAW09434.1| SNF2 family helicase/ATPase, putative [Aspergillus clavatus NRRL 1] Length = 1131 Score = 90.8 bits (224), Expect = 1e-16, Method: Composition-based stats. Identities = 34/162 (20%), Positives = 67/162 (41%), Gaps = 19/162 (11%) Query: 46 KHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFP---------QGRTL 94 K+ + ++ K+ L ++++ N +V F + L+ GRT Sbjct: 941 KNDEWMNSGKVDKLCELLKRFKENGDRTLVFSQFTMVMDILEHVLETLHLEFVRLDGRTN 1000 Query: 95 DKDPCTI-QEWNEG-KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIG 152 +D +I ++E IP+ + G G+NL N +V F ++ +E Q Sbjct: 1001 VEDRQSILDAFHERTDIPVFLLSTKAGGAGINL-ACANKVVIFDSSFNPQEDVQA----- 1054 Query: 153 VTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 R + G + V V L+ ++TI+E + +TK + + Sbjct: 1055 ENRAHRVGQTQEVEVIRLVTKDTIEEQIYALGQTKLALDQAV 1096 >gi|68299795|ref|NP_001261.2| chromodomain-helicase-DNA-binding protein 1 [Homo sapiens] gi|269849549|sp|O14646|CHD1_HUMAN RecName: Full=Chromodomain-helicase-DNA-binding protein 1; Short=CHD-1; AltName: Full=ATP-dependent helicase CHD1 gi|119616504|gb|EAW96098.1| chromodomain helicase DNA binding protein 1 [Homo sapiens] Length = 1710 Score = 90.8 bits (224), Expect = 1e-16, Method: Composition-based stats. Identities = 27/153 (17%), Positives = 56/153 (36%), Gaps = 21/153 (13%) Query: 68 AAPIIVAYHFNSDLARLQKAFP---------QGRTLDK-DPCTIQEWN-EGKIPL-LFAH 115 +++ L L + G + + +N EG Sbjct: 804 GNRVLIFSQMVRMLDILAEYLKYRQFPFQRLDGSIKGELRKQALDHFNAEGSEDFCFLLS 863 Query: 116 PASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNT 175 + G G+NL + +V F W+ + Q R + G K+ V +Y L+ + + Sbjct: 864 TRAGGLGINL-ASADTVVIFDSDWNPQNDLQAQAR-----AHRIGQKKQVNIYRLVTKGS 917 Query: 176 IDELVLQRLRTKSTIQDLL---LNALKKETIHV 205 ++E +L+R + K + L+ ++ K +H Sbjct: 918 VEEDILERAKKKMVLDHLVIQRMDTTGKTVLHT 950 >gi|162135084|ref|YP_001595825.1| hypothetical protein [Pseudomonas phage YuA] gi|161513931|emb|CAO77757.1| hypothetical protein [Pseudomonas phage YuA] Length = 564 Score = 90.8 bits (224), Expect = 1e-16, Method: Composition-based stats. Identities = 34/207 (16%), Positives = 75/207 (36%), Gaps = 39/207 (18%) Query: 20 IEAFNSASKTVKCLQLANGAVYYDEEKHW---KEVHDEKIKALEVIIEKANAAPIIVAYH 76 + A + ++ ++ Q+ G + D+E + ++ L +IE++ +IV Sbjct: 356 VIAALAITRLLRLQQITCGYLPTDDEAEPVYTIPGPNRRLDLLCDLIEESQ-HKVIVWAR 414 Query: 77 FNSDLARLQKAFPQGRTL----------DKDPCTIQEWN-------------------EG 107 F D+ + A + D+ + E Sbjct: 415 FQMDITLIMDALRERGISAVRYDGLVNDDERAEAKARFQGERPLYHNGQVVGREAVPPEE 474 Query: 108 KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFV 167 + + +PA+ GL L ++++S + L + Q R + G V Sbjct: 475 QARVFVGNPAAGATGLTLT-AAKTVIYYSNSFKLIDRLQ-----SEDRAHRIGQTNNVLY 528 Query: 168 YYLIAQNTIDELVLQRLRTKSTIQDLL 194 L+A++++DE V++ LR K + + Sbjct: 529 IDLVAEDSVDEKVVEALRNKFNVASQI 555 >gi|156553964|ref|XP_001602814.1| PREDICTED: similar to hCG32740 [Nasonia vitripennis] Length = 1131 Score = 90.8 bits (224), Expect = 1e-16, Method: Composition-based stats. Identities = 31/204 (15%), Positives = 71/204 (34%), Gaps = 32/204 (15%) Query: 26 ASKTVKCLQLANG---AVYYDEEKHWKEVHD----------EKIKALEVIIE--KANAAP 70 ++ N +Y D + + ++ K+ + +++ K Sbjct: 593 LVALTALRKICNHPDLFLYTDNNQEVLDENEMEKFGHWKRAGKMTVVRSLLKIWKKQGHR 652 Query: 71 IIVA---YHFNSDLARLQK-------AFPQGRTLDKDPCTIQEWN-EGKIPLLFAHPASC 119 +++ L L + + + T+ ++N + + Sbjct: 653 VLLFTQSRQMMHILEGLLQKEKYNYLRMDGTTPMGQRQLTVTKFNQDPSYFVFLLTTRVG 712 Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 G G+NL G N ++ + W+ Q ER + G +++V VY LI TI+E Sbjct: 713 GLGVNLT-GANRVIIYDPDWNPATDAQARERAW-----RIGQEKSVTVYRLITAGTIEEK 766 Query: 180 VLQRLRTKSTIQDLLLNALKKETI 203 + R K + + +L ++ + Sbjct: 767 MYHRQVFKILLSNKVLEDPRQRRL 790 >gi|156088833|ref|XP_001611823.1| SNF2 family N-terminal domain containing protein [Babesia bovis] gi|154799077|gb|EDO08255.1| SNF2 family N-terminal domain containing protein [Babesia bovis] Length = 1744 Score = 90.8 bits (224), Expect = 1e-16, Method: Composition-based stats. Identities = 30/146 (20%), Positives = 59/146 (40%), Gaps = 18/146 (12%) Query: 69 APIIVAYHFNSDLARLQ-----KAFPQGRTLDKDPC-----TIQEWNEGKIP--LLFAHP 116 ++V F L L+ + + R I+E+N P + Sbjct: 859 HKVLVFTQFQLVLDELEVYCNARGWKYMRLDGSTNKLIRELDIREFNSPSSPYFVYLIST 918 Query: 117 ASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTI 176 + G G+NL N +V F W+ Q I+R + G KR+V ++ ++++ T+ Sbjct: 919 RAGGLGINLT-AANHVVLFDEDWNPFIDLQAIDR-----AHRIGQKRSVHIWKVVSEWTV 972 Query: 177 DELVLQRLRTKSTIQDLLLNALKKET 202 +E + K + LL+N+ ++ Sbjct: 973 EERMALCREKKLHLDKLLINSQRQAM 998 >gi|109078102|ref|XP_001097125.1| PREDICTED: chromodomain-helicase-DNA-binding protein 1-like [Macaca mulatta] Length = 1712 Score = 90.8 bits (224), Expect = 1e-16, Method: Composition-based stats. Identities = 27/153 (17%), Positives = 56/153 (36%), Gaps = 21/153 (13%) Query: 68 AAPIIVAYHFNSDLARLQKAFP---------QGRTLDK-DPCTIQEWN-EGKIPL-LFAH 115 +++ L L + G + + +N EG Sbjct: 806 GNRVLIFSQMVRMLDILAEYLKYRQFPFQRLDGSIKGELRKQALDHFNAEGSEDFCFLLS 865 Query: 116 PASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNT 175 + G G+NL + +V F W+ + Q R + G K+ V +Y L+ + + Sbjct: 866 TRAGGLGINL-ASADTVVIFDSDWNPQNDLQAQAR-----AHRIGQKKQVNIYRLVTKGS 919 Query: 176 IDELVLQRLRTKSTIQDLL---LNALKKETIHV 205 ++E +L+R + K + L+ ++ K +H Sbjct: 920 VEEDILERAKKKMVLDHLVIQRMDTTGKTVLHT 952 >gi|115462049|ref|NP_001054624.1| Os05g0144300 [Oryza sativa Japonica Group] gi|53749343|gb|AAU90202.1| putative transcriptional regulator [Oryza sativa Japonica Group] gi|113578175|dbj|BAF16538.1| Os05g0144300 [Oryza sativa Japonica Group] Length = 1128 Score = 90.8 bits (224), Expect = 1e-16, Method: Composition-based stats. Identities = 34/189 (17%), Positives = 71/189 (37%), Gaps = 25/189 (13%) Query: 28 KTVKCLQLANGAVYYDEE-----KHWKEVHDEKIKALEVIIEKAN--AAPIIVAYHFNSD 80 +++ + N + E + K + L+ ++ K +++ Sbjct: 716 LSMQLRKCCNHPYLFVEHYNMYQRQEIVRSSGKFELLDRLLPKLQRAGHRVLLFSQMTKL 775 Query: 81 LARL---------QKAFPQGRTL-DKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYG 128 L L + G T ++ + ++N+ L + G GLNLQ Sbjct: 776 LDILEVYLQMYQFKYMRLDGSTKTEERGRLLADFNKKDSEYFLFLLSTRAGGLGLNLQT- 834 Query: 129 GNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKS 188 + ++ F W+ + QQ +R + G K V V+ L++ +I+E +L R + K Sbjct: 835 ADTVIIFDSDWNPQMDQQAEDR-----AHRIGQKNEVRVFVLVSVGSIEEEILDRAKQKM 889 Query: 189 TIQDLLLNA 197 I ++ A Sbjct: 890 GIDAKVIQA 898 >gi|330960628|gb|EGH60888.1| Non-specific serine/threonine protein kinase [Pseudomonas syringae pv. maculicola str. ES4326] Length = 610 Score = 90.8 bits (224), Expect = 1e-16, Method: Composition-based stats. Identities = 32/154 (20%), Positives = 67/154 (43%), Gaps = 21/154 (13%) Query: 55 KIKALEVIIEKA--NAAPIIVAYHFNSDLARLQKAF-----------PQGRTLDKDPCTI 101 K+ II +A + +++ FN ++KA G T +D +I Sbjct: 439 KMDRAISIIVEAFFSGKKVLLFSVFNKVEFLIKKALSSYPKSFFWGAINGSTPPEDRQSI 498 Query: 102 -QEWNE-GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQA 159 +++E G L +P + G GLN+ +++ F+ W+ Q R + Sbjct: 499 VDKFSEFGGAGCLILNPKAAGAGLNIT-AATVVIHFTPVWNPALESQASAR-----AHRR 552 Query: 160 GFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDL 193 G + V +Y+L ++T++E++++R K + + Sbjct: 553 GQCQPVTIYHLFYKDTVEEVMVERSAWKRELANQ 586 >gi|311249889|ref|XP_003123851.1| PREDICTED: chromodomain-helicase-DNA-binding protein 1-like [Sus scrofa] Length = 1706 Score = 90.8 bits (224), Expect = 1e-16, Method: Composition-based stats. Identities = 27/153 (17%), Positives = 56/153 (36%), Gaps = 21/153 (13%) Query: 68 AAPIIVAYHFNSDLARLQKAFP---------QGRTLDK-DPCTIQEWN-EGKIPL-LFAH 115 +++ L L + G + + +N EG Sbjct: 798 GNRVLIFSQMVRMLDILAEYLKYRQFPFQRLDGSIKGELRKQALDHFNAEGSEDFCFLLS 857 Query: 116 PASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNT 175 + G G+NL + +V F W+ + Q R + G K+ V +Y L+ + + Sbjct: 858 TRAGGLGINL-ASADTVVIFDSDWNPQNDLQAQAR-----AHRIGQKKQVNIYRLVTKGS 911 Query: 176 IDELVLQRLRTKSTIQDLL---LNALKKETIHV 205 ++E +L+R + K + L+ ++ K +H Sbjct: 912 VEEDILERAKKKMVLDHLVIQRMDTTGKTVLHT 944 >gi|297675709|ref|XP_002815806.1| PREDICTED: chromodomain-helicase-DNA-binding protein 1-like [Pongo abelii] Length = 1709 Score = 90.8 bits (224), Expect = 1e-16, Method: Composition-based stats. Identities = 27/153 (17%), Positives = 56/153 (36%), Gaps = 21/153 (13%) Query: 68 AAPIIVAYHFNSDLARLQKAFP---------QGRTLDK-DPCTIQEWN-EGKIPL-LFAH 115 +++ L L + G + + +N EG Sbjct: 804 GNRVLIFSQMVRMLDILAEYLKYRQFPFQRLDGSIKGELRKQALDHFNAEGSEDFCFLLS 863 Query: 116 PASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNT 175 + G G+NL + +V F W+ + Q R + G K+ V +Y L+ + + Sbjct: 864 TRAGGLGINL-ASADTVVIFDSDWNPQNDLQAQAR-----AHRIGQKKQVNIYRLVTKGS 917 Query: 176 IDELVLQRLRTKSTIQDLL---LNALKKETIHV 205 ++E +L+R + K + L+ ++ K +H Sbjct: 918 VEEDILERAKKKMVLDHLVIQRMDTTGKTVLHT 950 >gi|159489898|ref|XP_001702928.1| SWI/SNF chromatin remodeling complex component [Chlamydomonas reinhardtii] gi|158270951|gb|EDO96781.1| SWI/SNF chromatin remodeling complex component [Chlamydomonas reinhardtii] Length = 962 Score = 90.8 bits (224), Expect = 1e-16, Method: Composition-based stats. Identities = 24/132 (18%), Positives = 44/132 (33%), Gaps = 15/132 (11%) Query: 69 APIIVAYHFNSDLARLQ---------KAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASC 119 ++ L+ L+ G D+ + N IP+ Sbjct: 653 HRTLIFSQSKVMLSILEAGVRAMDLEYCRIDGDVDDRQAHVARFQNSKTIPVFLLTSQVG 712 Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 G GL L + ++ W+ Q ++R + G R V VY LI T++E Sbjct: 713 GLGLTLT-AADRVIIVDPAWNPSIDNQSVDR-----AYRMGQTRDVVVYRLITCGTVEEK 766 Query: 180 VLQRLRTKSTIQ 191 + ++ K + Sbjct: 767 IYRKQVFKGGLS 778 >gi|2645429|gb|AAB87381.1| CHD1 [Homo sapiens] Length = 1709 Score = 90.8 bits (224), Expect = 1e-16, Method: Composition-based stats. Identities = 27/153 (17%), Positives = 56/153 (36%), Gaps = 21/153 (13%) Query: 68 AAPIIVAYHFNSDLARLQKAFP---------QGRTLDK-DPCTIQEWN-EGKIPL-LFAH 115 +++ L L + G + + +N EG Sbjct: 804 GNRVLIFSQMVRMLDILAEYLKYRQFPFQRLDGSIKGELRKQALDHFNAEGSEDFCFLLS 863 Query: 116 PASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNT 175 + G G+NL + +V F W+ + Q R + G K+ V +Y L+ + + Sbjct: 864 TRAGGLGINL-ASADTVVIFDSDWNPQNDLQAQAR-----AHRIGQKKQVNIYRLVTKGS 917 Query: 176 IDELVLQRLRTKSTIQDLL---LNALKKETIHV 205 ++E +L+R + K + L+ ++ K +H Sbjct: 918 VEEDILERAKKKMVLDHLVIQRMDTTGKTVLHT 950 >gi|302658563|ref|XP_003020983.1| hypothetical protein TRV_04848 [Trichophyton verrucosum HKI 0517] gi|291184858|gb|EFE40365.1| hypothetical protein TRV_04848 [Trichophyton verrucosum HKI 0517] Length = 1362 Score = 90.8 bits (224), Expect = 1e-16, Method: Composition-based stats. Identities = 39/225 (17%), Positives = 77/225 (34%), Gaps = 33/225 (14%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQL---ANGAVYYDE----------EKHW 48 K Y + + + +QL N +D Sbjct: 788 KLYKQLVTHNKLAVSDGKGGKTPVRGLSNMLMQLRKLCNHPFVFDSVEEELNPGKATNDL 847 Query: 49 KEVHDEKIKALEVIIEK--ANAAPIIVAYH------FNSDLAR---LQKAFPQGRTLDKD 97 K + L+ I+ K A+ +++ + D R ++ G T D Sbjct: 848 IWRTAGKFELLDRILPKFFASGHRVLMFFQMTQIMNIMEDFMRFRGMKYLRLDGATKSDD 907 Query: 98 PCTI-QEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 + + +NE + + G GLNLQ + ++ + W+ + Q Sbjct: 908 RSDLLRRFNEPGSEYFCFLLSTRAGGLGLNLQT-ADTVIIYDSDWNPHQDLQA-----QD 961 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 R + G K V + LI+ N+++E +L+R + K + ++ A K Sbjct: 962 RAHRIGQKNEVRILRLISSNSVEERILERAQFKLDMDGKVIQAGK 1006 >gi|290878263|emb|CBK39322.1| Isw1p [Saccharomyces cerevisiae EC1118] Length = 1069 Score = 90.8 bits (224), Expect = 1e-16, Method: Composition-based stats. Identities = 36/223 (16%), Positives = 82/223 (36%), Gaps = 39/223 (17%) Query: 7 FQRELYCDLQGENIEAFNSAS--------KTVKCLQLAN-------------GAVYYDEE 45 Q++ Y + ++++A N ++ +QL G Y +E Sbjct: 376 MQKKWYKKILEKDLDAVNGSNGSKESKTRLLNIMMQLRKCCNHPYLFDGAEPGPPYTTDE 435 Query: 46 KHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQ---------KAFPQGRTLDK 96 ++ + K + +++ + L L+ G T + Sbjct: 436 HLVYNAAKLQVLDKLLKKLKEEGSRVLIFSQMSRLLDILEDYCYFRNYEYCRIDGSTAHE 495 Query: 97 DP-CTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGV 153 D I ++N + + G G+NL +++V + W+ + Q ++R Sbjct: 496 DRIQAIDDYNAPDSKKFVFLLTTRAGGLGINLT-SADVVVLYDSDWNPQADLQAMDR--- 551 Query: 154 TRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + G K+ V V+ L+ N+++E +L+R K + L++ Sbjct: 552 --AHRIGQKKQVKVFRLVTDNSVEEKILERATQKLRLDQLVIQ 592 >gi|242793636|ref|XP_002482204.1| SNF2 family helicase/ATPase, putative [Talaromyces stipitatus ATCC 10500] gi|218718792|gb|EED18212.1| SNF2 family helicase/ATPase, putative [Talaromyces stipitatus ATCC 10500] Length = 1788 Score = 90.8 bits (224), Expect = 1e-16, Method: Composition-based stats. Identities = 31/175 (17%), Positives = 69/175 (39%), Gaps = 23/175 (13%) Query: 34 QLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANA--APIIVAYHFNSDLARLQK----- 86 QL + D+ KH + + I+E++ I+ L L++ Sbjct: 1363 QLLSDVPDLDDPKH-----SHRADIFKKIVEESVRLEEKILCFSQSIPTLDYLERLLRSS 1417 Query: 87 -----AFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDL 141 + ++ +N+G+I + + G GLN+ G N ++ F ++ Sbjct: 1418 GVRFYRLDGSTAVKNRQKDVKSFNQGEISVYLISTRAGGLGLNIT-GANRVIIFDFSFNP 1476 Query: 142 EEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 +Q + R + G ++ V+VY +A T +E+V + K+ + +++ Sbjct: 1477 TWEEQAVGR-----AYRLGQEKPVYVYRFLAGGTYEEVVHNKSIFKTQLAMRVVD 1526 >gi|212546587|ref|XP_002153447.1| SNF2 family helicase/ATPase, putative [Penicillium marneffei ATCC 18224] gi|210064967|gb|EEA19062.1| SNF2 family helicase/ATPase, putative [Penicillium marneffei ATCC 18224] Length = 1084 Score = 90.8 bits (224), Expect = 1e-16, Method: Composition-based stats. Identities = 37/178 (20%), Positives = 74/178 (41%), Gaps = 24/178 (13%) Query: 46 KHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFP---------QGRTL 94 K+ + ++ K+ L +++K N ++ F + L+ GRT Sbjct: 901 KNQEWMNSGKVDKLCELLKKFKENGDRTLIFSQFTLVMDILEYVLETINMRFFRLDGRTN 960 Query: 95 DKDPCTI--QEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIG 152 +D +I + + +IP+ + G G+NL N ++ F ++ +E Q Sbjct: 961 VEDRQSILDAFYEQTEIPVFMLSTKAGGAGINL-ACANKVIIFDSSFNPQEDVQA----- 1014 Query: 153 VTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQ-----DLLLNALKKETIHV 205 R + G R V V L+ + TI+E + +TK T+ D L ++ + E + + Sbjct: 1015 ENRAHRVGQTREVEVIRLVTKGTIEEQIYALGQTKLTLDQRVVGDDLSDSKRSEEVGM 1072 >gi|67521594|ref|XP_658859.1| hypothetical protein AN1255.2 [Aspergillus nidulans FGSC A4] gi|40746692|gb|EAA65848.1| hypothetical protein AN1255.2 [Aspergillus nidulans FGSC A4] gi|259488424|tpe|CBF87846.1| TPA: chromodomain helicase (Chd1), putative (AFU_orthologue; AFUA_1G10290) [Aspergillus nidulans FGSC A4] Length = 1517 Score = 90.8 bits (224), Expect = 1e-16, Method: Composition-based stats. Identities = 34/216 (15%), Positives = 76/216 (35%), Gaps = 35/216 (16%) Query: 1 MKQYHKFQRELYCDL-QGENIEAFNSASKTVKCLQLANG-AVYYDEEKHWKEVHDEKIKA 58 ++ Y + Y L +G + + + ++ + +N ++ E E + Sbjct: 688 LEYYKNILTKNYAALNEGTKGQKQSLLNIMMELKKASNHPFMFPSAETKILEGSTRREDV 747 Query: 59 LEVIIEKA---------------NAAPIIVAYHFNSDLARLQKAFP-QGRTLDK------ 96 L +I + + +++ L L +G T + Sbjct: 748 LRALITSSGKMMLLDQLLAKLKRDGHRVLIFSQMVKMLDILGDYMEYRGYTYQRLDGTIP 807 Query: 97 ---DPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERI 151 I+ +N + G G+NL + ++ F W+ + Q + R Sbjct: 808 SASRRLAIEHYNAPDSSDFAFILSTRAGGLGINLMT-ADTVILFDSDWNPQADLQAMAR- 865 Query: 152 GVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTK 187 + G + V VY L++++T++E V++R R K Sbjct: 866 ----AHRIGQTKPVSVYRLVSKDTVEEEVIERARNK 897 >gi|323310031|gb|EGA63226.1| Isw1p [Saccharomyces cerevisiae FostersO] Length = 1069 Score = 90.8 bits (224), Expect = 1e-16, Method: Composition-based stats. Identities = 36/223 (16%), Positives = 82/223 (36%), Gaps = 39/223 (17%) Query: 7 FQRELYCDLQGENIEAFNSAS--------KTVKCLQLAN-------------GAVYYDEE 45 Q++ Y + ++++A N ++ +QL G Y +E Sbjct: 376 MQKKWYKKILEKDLDAVNGSNGSKESKTRLLNIMMQLRKCCNHPYLFDGAEPGPPYTTDE 435 Query: 46 KHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQ---------KAFPQGRTLDK 96 ++ + K + +++ + L L+ G T + Sbjct: 436 HLVYNAAKLQVLDKLLKKLKEEGSRVLIFSQMSRLLDILEDYCYFRNYEYCRIDGSTAHE 495 Query: 97 DP-CTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGV 153 D I ++N + + G G+NL +++V + W+ + Q ++R Sbjct: 496 DRIQAIDDYNAPDSKKFVFLLTTRAGGLGINLT-SADVVVLYDSDWNPQADLQAMDR--- 551 Query: 154 TRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + G K+ V V+ L+ N+++E +L+R K + L++ Sbjct: 552 --AHRIGQKKQVKVFRLVTDNSVEEKILERATQKLRLDQLVIQ 592 >gi|296194069|ref|XP_002744792.1| PREDICTED: chromodomain-helicase-DNA-binding protein 1 [Callithrix jacchus] Length = 1713 Score = 90.8 bits (224), Expect = 1e-16, Method: Composition-based stats. Identities = 27/153 (17%), Positives = 56/153 (36%), Gaps = 21/153 (13%) Query: 68 AAPIIVAYHFNSDLARLQKAFP---------QGRTLDK-DPCTIQEWN-EGKIPL-LFAH 115 +++ L L + G + + +N EG Sbjct: 806 GNRVLIFSQMVRMLDILAEYLKYRQFPFQRLDGSIKGELRKQALDHFNAEGSEDFCFLLS 865 Query: 116 PASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNT 175 + G G+NL + +V F W+ + Q R + G K+ V +Y L+ + + Sbjct: 866 TRAGGLGINL-ASADTVVIFDSDWNPQNDLQAQAR-----AHRIGQKKQVNIYRLVTKGS 919 Query: 176 IDELVLQRLRTKSTIQDLL---LNALKKETIHV 205 ++E +L+R + K + L+ ++ K +H Sbjct: 920 VEEDILERAKKKMVLDHLVIQRMDTTGKTVLHT 952 >gi|67517153|ref|XP_658459.1| hypothetical protein AN0855.2 [Aspergillus nidulans FGSC A4] gi|40746529|gb|EAA65685.1| hypothetical protein AN0855.2 [Aspergillus nidulans FGSC A4] gi|259488860|tpe|CBF88651.1| TPA: DNA-dependent ATPase (Eurofung) [Aspergillus nidulans FGSC A4] Length = 1011 Score = 90.8 bits (224), Expect = 1e-16, Method: Composition-based stats. Identities = 25/104 (24%), Positives = 45/104 (43%), Gaps = 9/104 (8%) Query: 96 KDPCTIQEWN---EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIG 152 K ++++N + G GLNL G + LV F + W+ Q + RI Sbjct: 686 KRQSLVEDFNRHPASTCFAFLLSAKAGGTGLNL-IGASRLVLFDVDWNPATDIQAMARI- 743 Query: 153 VTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + G K +Y ++ Q +++E + QR TK + D ++ Sbjct: 744 ----HRDGQKHHCHIYRILLQGSLEEKIWQRQVTKIGLADSVME 783 >gi|224089288|ref|XP_002186536.1| PREDICTED: hypothetical protein [Taeniopygia guttata] Length = 1650 Score = 90.8 bits (224), Expect = 1e-16, Method: Composition-based stats. Identities = 27/153 (17%), Positives = 56/153 (36%), Gaps = 21/153 (13%) Query: 68 AAPIIVAYHFNSDLARLQKAFP---------QGRTLDK-DPCTIQEWN-EGKIPL-LFAH 115 +++ L L + G + + +N EG Sbjct: 648 GNRVLIFSQMVRMLDILAEYLKYRQFPFQRLDGSIKGELRKQALDHFNAEGSEDFCFLLS 707 Query: 116 PASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNT 175 + G G+NL + +V F W+ + Q R + G K+ V +Y L+ + + Sbjct: 708 TRAGGLGINL-ASADTVVIFDSDWNPQNDLQAQAR-----AHRIGQKKQVNIYRLVTKGS 761 Query: 176 IDELVLQRLRTKSTIQDLL---LNALKKETIHV 205 ++E +L+R + K + L+ ++ K +H Sbjct: 762 VEEDILERAKKKMVLDHLVIQRMDTTGKTVLHT 794 >gi|269969347|sp|B6ZLK2|CHD1_CHICK RecName: Full=Chromodomain-helicase-DNA-binding protein 1; Short=CHD-1; AltName: Full=ATP-dependent helicase CHD1 gi|218117883|dbj|BAH03306.1| chromodomain-helicase-DNA-binding protein 1 [Gallus gallus] Length = 1719 Score = 90.8 bits (224), Expect = 1e-16, Method: Composition-based stats. Identities = 27/153 (17%), Positives = 56/153 (36%), Gaps = 21/153 (13%) Query: 68 AAPIIVAYHFNSDLARLQKAFP---------QGRTLDK-DPCTIQEWN-EGKIPL-LFAH 115 +++ L L + G + + +N EG Sbjct: 800 GNRVLIFSQMVRMLDILAEYLKYRQFPFQRLDGSIKGELRKQALDHFNAEGSEDFCFLLS 859 Query: 116 PASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNT 175 + G G+NL + +V F W+ + Q R + G K+ V +Y L+ + + Sbjct: 860 TRAGGLGINL-ASADTVVIFDSDWNPQNDLQAQAR-----AHRIGQKKQVNIYRLVTKGS 913 Query: 176 IDELVLQRLRTKSTIQDLL---LNALKKETIHV 205 ++E +L+R + K + L+ ++ K +H Sbjct: 914 VEEDILERAKKKMVLDHLVIQRMDTTGKTVLHT 946 >gi|73952004|ref|XP_856319.1| PREDICTED: similar to chromodomain helicase DNA binding protein 1 isoform 6 [Canis familiaris] Length = 1573 Score = 90.8 bits (224), Expect = 1e-16, Method: Composition-based stats. Identities = 27/153 (17%), Positives = 56/153 (36%), Gaps = 21/153 (13%) Query: 68 AAPIIVAYHFNSDLARLQKAFP---------QGRTLDK-DPCTIQEWN-EGKIPL-LFAH 115 +++ L L + G + + +N EG Sbjct: 803 GNRVLIFSQMVRMLDILAEYLKYRQFPFQRLDGSIKGELRKQALDHFNAEGSEDFCFLLS 862 Query: 116 PASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNT 175 + G G+NL + +V F W+ + Q R + G K+ V +Y L+ + + Sbjct: 863 TRAGGLGINL-ASADTVVIFDSDWNPQNDLQAQAR-----AHRIGQKKQVNIYRLVTKGS 916 Query: 176 IDELVLQRLRTKSTIQDLL---LNALKKETIHV 205 ++E +L+R + K + L+ ++ K +H Sbjct: 917 VEEDILERAKKKMVLDHLVIQRMDTTGKTVLHT 949 >gi|109658944|gb|AAI17135.1| Chromodomain helicase DNA binding protein 1 [Homo sapiens] Length = 1709 Score = 90.8 bits (224), Expect = 1e-16, Method: Composition-based stats. Identities = 27/153 (17%), Positives = 56/153 (36%), Gaps = 21/153 (13%) Query: 68 AAPIIVAYHFNSDLARLQKAFP---------QGRTLDK-DPCTIQEWN-EGKIPL-LFAH 115 +++ L L + G + + +N EG Sbjct: 804 GNRVLIFSQMVRMLDILAEYLKYRQFPFQRLDGSIKGELRKQALDHFNAEGSEDFCFLLS 863 Query: 116 PASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNT 175 + G G+NL + +V F W+ + Q R + G K+ V +Y L+ + + Sbjct: 864 TRAGGLGINL-ASADTVVIFDSDWNPQNDLQAQAR-----AHRIGQKKQVNIYRLVTKGS 917 Query: 176 IDELVLQRLRTKSTIQDLL---LNALKKETIHV 205 ++E +L+R + K + L+ ++ K +H Sbjct: 918 VEEDILERAKKKMVLDHLVIQRMDTTGKTVLHT 950 >gi|73952002|ref|XP_856275.1| PREDICTED: similar to chromodomain helicase DNA binding protein 1 isoform 5 [Canis familiaris] Length = 1702 Score = 90.8 bits (224), Expect = 1e-16, Method: Composition-based stats. Identities = 27/153 (17%), Positives = 56/153 (36%), Gaps = 21/153 (13%) Query: 68 AAPIIVAYHFNSDLARLQKAFP---------QGRTLDK-DPCTIQEWN-EGKIPL-LFAH 115 +++ L L + G + + +N EG Sbjct: 794 GNRVLIFSQMVRMLDILAEYLKYRQFPFQRLDGSIKGELRKQALDHFNAEGSEDFCFLLS 853 Query: 116 PASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNT 175 + G G+NL + +V F W+ + Q R + G K+ V +Y L+ + + Sbjct: 854 TRAGGLGINL-ASADTVVIFDSDWNPQNDLQAQAR-----AHRIGQKKQVNIYRLVTKGS 907 Query: 176 IDELVLQRLRTKSTIQDLL---LNALKKETIHV 205 ++E +L+R + K + L+ ++ K +H Sbjct: 908 VEEDILERAKKKMVLDHLVIQRMDTTGKTVLHT 940 >gi|299754942|ref|XP_001828302.2| hypothetical protein CC1G_02883 [Coprinopsis cinerea okayama7#130] gi|298410996|gb|EAU93653.2| hypothetical protein CC1G_02883 [Coprinopsis cinerea okayama7#130] Length = 928 Score = 90.8 bits (224), Expect = 1e-16, Method: Composition-based stats. Identities = 30/169 (17%), Positives = 60/169 (35%), Gaps = 23/169 (13%) Query: 40 VYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTL----- 94 VY D K+ + L II +++ + + L L + R Sbjct: 756 VYSD--KYLSGKFKVVLNLLRKII--GAREKVVIFSSYVTLLELLGECLDARRIKFIEFN 811 Query: 95 -------DKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQM 147 + N+ + ++ + GL++ N ++ WW+ +Q Sbjct: 812 GKKSTHERTGALDVIA-NDPRCHVMLISLKAGSVGLDIT-SCNNVILMDPWWNPFVEEQA 869 Query: 148 IERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 I R+ + G R V VY +I +TI+ + + + K T + L+ Sbjct: 870 ISRV-----HRFGQTRPVTVYRIITPDTIEPRIQEIQQEKRTQVEAYLD 913 >gi|170050411|ref|XP_001861299.1| chromatin remodelling complex ATPase chain Iswi [Culex quinquefasciatus] gi|167872033|gb|EDS35416.1| chromatin remodelling complex ATPase chain Iswi [Culex quinquefasciatus] Length = 730 Score = 90.8 bits (224), Expect = 1e-16, Method: Composition-based stats. Identities = 29/143 (20%), Positives = 56/143 (39%), Gaps = 18/143 (12%) Query: 65 KANAAPIIVAYHFNSDLARLQ-----KAFPQGRTLDKDPC-----TIQEWNEG--KIPLL 112 KA + +++ F L L+ K + R P I E+N + + Sbjct: 452 KARGSRVLLFSQFVLMLNILEDYLVWKGYKYSRLTGTTPQETRQKMIDEFNSPGSETFIF 511 Query: 113 FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIA 172 S G G+NL + ++F+ L W+ + Q +R + G + V V+ + Sbjct: 512 MITTRSGGLGINL-PTADTVIFYDLDWNPQADFQAEDR-----AHRIGQLKQVHVFRFVI 565 Query: 173 QNTIDELVLQRLRTKSTIQDLLL 195 T+DE V + K+ + ++ Sbjct: 566 LGTVDEAVYGHSQRKTQLDKAIV 588 >gi|241952695|ref|XP_002419069.1| ATP-dependent helicase, putative [Candida dubliniensis CD36] gi|223642409|emb|CAX42654.1| ATP-dependent helicase, putative [Candida dubliniensis CD36] Length = 870 Score = 90.8 bits (224), Expect = 1e-16, Method: Composition-based stats. Identities = 29/189 (15%), Positives = 76/189 (40%), Gaps = 26/189 (13%) Query: 28 KTVKCLQLANG-AVYYD---EEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDL 81 K ++ + N +YY+ ++ + K + L ++ ++ +++ F L Sbjct: 581 KMIQLRNICNSPFIYYNYPILDQTEVIRNSAKFQILNQLLPPLLSSGHKVLIFAQFTQVL 640 Query: 82 ARLQKAFPQGRTLD--------------KDPCTIQEWNEGKIPLLFAHPASCGHGLNLQY 127 L+ + +L+ +D Q N K + + G G+NL Sbjct: 641 DLLEDWLEESSSLNGRICRLDGSTNHQIRDEQISQFNNNPKFKVFLLSTRAGGLGINL-V 699 Query: 128 GGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTK 187 + ++ W+ + Q I+R+ + G V ++ + +++I+E+++ R +K Sbjct: 700 AADTVILMDNDWNPQMDLQAIDRV-----HRIGQINPVKIFRFVIKDSIEEVLISRSGSK 754 Query: 188 STIQDLLLN 196 ++ L++ Sbjct: 755 RFLERLVIQ 763 >gi|156845729|ref|XP_001645754.1| hypothetical protein Kpol_1010p11 [Vanderwaltozyma polyspora DSM 70294] gi|156116422|gb|EDO17896.1| hypothetical protein Kpol_1010p11 [Vanderwaltozyma polyspora DSM 70294] Length = 661 Score = 90.8 bits (224), Expect = 1e-16, Method: Composition-based stats. Identities = 43/224 (19%), Positives = 81/224 (36%), Gaps = 39/224 (17%) Query: 6 KFQRELYCDLQGENIEAFNSAS--------KTVKCLQLAN-------------GAVYYDE 44 + QR+ Y L ++I+A N A +QL G Y + Sbjct: 384 QMQRKWYKSLLEKDIDAVNGAVGKREGKTRLLNIVMQLRKCCNHPYLFEGAEPGPPYTTD 443 Query: 45 EKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQ---------KAFPQGRTLD 95 E I + K + + +++ + L L+ G T Sbjct: 444 EHLVFNSGKMIILDKLLKKLKESGSRVLIFSQMSRLLDILEDYCYFRGYNYCRIDGSTSH 503 Query: 96 KDP-CTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIG 152 ++ I E+NE + + G G+NL + +V + W+ + Q ++R Sbjct: 504 EERIEAIDEYNEPDSDKFVFLLTTRAGGLGINL-VTADTVVLYDSDWNPQADLQAMDR-- 560 Query: 153 VTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + G K+ V VY + +N I+E V++R K + L++ Sbjct: 561 ---AHRIGQKKQVHVYRFVTENAIEEKVIERAAQKLRLDQLVIQ 601 >gi|126313541|ref|XP_001362697.1| PREDICTED: similar to transcription termination factor, RNA polymerase II [Monodelphis domestica] Length = 1151 Score = 90.8 bits (224), Expect = 1e-16, Method: Composition-based stats. Identities = 29/157 (18%), Positives = 59/157 (37%), Gaps = 18/157 (11%) Query: 53 DEKIKALEVIIEKANAAPIIVAYHFNSDLAR---------LQKAFPQGRTLDKDPCT-IQ 102 + LE+I + + ++ + L L A G K ++ Sbjct: 982 SSLLAELELIQKNSEFQKSVIVSQWTCMLKIVAMHLQRRGLTYAVIDGSVNPKQRMDLVE 1041 Query: 103 EWNE--GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 +N ++ + G GL+L GGN L + W+ Q +RI + G Sbjct: 1042 AFNNSCRGPQVMLISLLAGGVGLSLT-GGNHLFLLDMHWNPALEDQACDRI-----YRVG 1095 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 K+ V ++ + ++T++E + R K + +L+ Sbjct: 1096 QKKDVVIHRFVCEDTVEEKISHLQRRKKDLASQVLSG 1132 >gi|73952000|ref|XP_856236.1| PREDICTED: similar to chromodomain helicase DNA binding protein 1 isoform 4 [Canis familiaris] Length = 1701 Score = 90.8 bits (224), Expect = 1e-16, Method: Composition-based stats. Identities = 27/153 (17%), Positives = 56/153 (36%), Gaps = 21/153 (13%) Query: 68 AAPIIVAYHFNSDLARLQKAFP---------QGRTLDK-DPCTIQEWN-EGKIPL-LFAH 115 +++ L L + G + + +N EG Sbjct: 793 GNRVLIFSQMVRMLDILAEYLKYRQFPFQRLDGSIKGELRKQALDHFNAEGSEDFCFLLS 852 Query: 116 PASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNT 175 + G G+NL + +V F W+ + Q R + G K+ V +Y L+ + + Sbjct: 853 TRAGGLGINL-ASADTVVIFDSDWNPQNDLQAQAR-----AHRIGQKKQVNIYRLVTKGS 906 Query: 176 IDELVLQRLRTKSTIQDLL---LNALKKETIHV 205 ++E +L+R + K + L+ ++ K +H Sbjct: 907 VEEDILERAKKKMVLDHLVIQRMDTTGKTVLHT 939 >gi|254586715|ref|XP_002498925.1| ZYRO0G21780p [Zygosaccharomyces rouxii] gi|238941819|emb|CAR29992.1| ZYRO0G21780p [Zygosaccharomyces rouxii] Length = 1094 Score = 90.8 bits (224), Expect = 1e-16, Method: Composition-based stats. Identities = 38/223 (17%), Positives = 85/223 (38%), Gaps = 39/223 (17%) Query: 7 FQRELYCDLQGENIEAFNSAS--------KTVKCLQL---ANGAVYYD--------EEKH 47 Q+ Y + ++++A N++ +QL N +D Sbjct: 377 MQKTWYKQILEKDLDAVNASGGQKESKTRLLNIVMQLRKCCNHPYLFDGAEPGPPYTTDE 436 Query: 48 WKEVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQ---------KAFPQGRTLDK 96 + K+K L+ ++ K + +++ + L L+ G T + Sbjct: 437 HLVYNSAKLKVLDKLLRKMKEQGSRVLIFSQMSRLLDILEDYCFLREYDYCRIDGSTDHE 496 Query: 97 DP-CTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGV 153 D +I E+N L + G G+NL +++V + W+ + Q ++R Sbjct: 497 DRIRSIDEYNRPDSNKFLFLLTTRAGGLGINLT-SADVVVLYDSDWNPQADLQAMDR--- 552 Query: 154 TRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + G K+ V V+ + N++++ +L+R K + L++ Sbjct: 553 --AHRIGQKKQVKVFRFVTDNSVEDKILERATQKLRLDQLVIQ 593 >gi|149726480|ref|XP_001504655.1| PREDICTED: chromodomain helicase DNA binding protein 1 [Equus caballus] Length = 1713 Score = 90.8 bits (224), Expect = 1e-16, Method: Composition-based stats. Identities = 27/153 (17%), Positives = 56/153 (36%), Gaps = 21/153 (13%) Query: 68 AAPIIVAYHFNSDLARLQKAFP---------QGRTLDK-DPCTIQEWN-EGKIPL-LFAH 115 +++ L L + G + + +N EG Sbjct: 805 GNRVLIFSQMVRMLDILAEYLKYRQFPFQRLDGSIKGELRKQALDHFNAEGSEDFCFLLS 864 Query: 116 PASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNT 175 + G G+NL + +V F W+ + Q R + G K+ V +Y L+ + + Sbjct: 865 TRAGGLGINL-ASADTVVIFDSDWNPQNDLQAQAR-----AHRIGQKKQVNIYRLVTKGS 918 Query: 176 IDELVLQRLRTKSTIQDLL---LNALKKETIHV 205 ++E +L+R + K + L+ ++ K +H Sbjct: 919 VEEDILERAKKKMVLDHLVIQRMDTTGKTVLHT 951 >gi|91089209|ref|XP_967093.1| PREDICTED: similar to helicase [Tribolium castaneum] gi|270012470|gb|EFA08918.1| hypothetical protein TcasGA2_TC006624 [Tribolium castaneum] Length = 871 Score = 90.8 bits (224), Expect = 1e-16, Method: Composition-based stats. Identities = 27/157 (17%), Positives = 61/157 (38%), Gaps = 19/157 (12%) Query: 51 VHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQKAFP---------QGRTLDKDPC 99 + K L+ I+ + N +++ + L ++ G T + Sbjct: 682 LTSGKFLYLDKILAELKQNGHRVLIFSQYVIMLNVMEDYLKIRKHKYLRMDGSTPVNERQ 741 Query: 100 TIQEWNEGK--IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 + + G I + + G G+NL +++ + ++ +Q +R Sbjct: 742 DLVDEYMGDNSIFIFLLSTRAGGLGINLTSADTVIIH-DIDFNPYNDKQAEDRC-----H 795 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 + G R V VY L++Q TI+E +L+ + K ++ + Sbjct: 796 RMGQTRPVTVYRLVSQGTIEEGMLEMNKEKLKLERQI 832 >gi|195344346|ref|XP_002038749.1| GM10987 [Drosophila sechellia] gi|194133770|gb|EDW55286.1| GM10987 [Drosophila sechellia] Length = 286 Score = 90.4 bits (223), Expect = 1e-16, Method: Composition-based stats. Identities = 34/166 (20%), Positives = 63/166 (37%), Gaps = 22/166 (13%) Query: 50 EVHDEKIKALEVIIE----KANAAPIIVAYHFNSDLARLQKAFPQGRT----------LD 95 KI + I++ K++ IV + S L L+ + + Sbjct: 111 HRPSSKINMVIQILKTTILKSSDDKAIVVSQWTSVLDILRDHLSKDGVATLSLNGTIPVK 170 Query: 96 KDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGV 153 + E+N+ +L + G GLNL G N L+ L W+ + Q +RI Sbjct: 171 NRQDIVNEFNDRNNQKRVLLLSLTAGGVGLNL-IGANHLLLLDLHWNPQLEAQAQDRI-- 227 Query: 154 TRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 + G K+ V +Y + +T+++ + K + D +L K Sbjct: 228 ---YRVGQKKNVIIYKFMCVDTVEQRIKALQDKKLDLADGVLTGAK 270 >gi|325096295|gb|EGC49605.1| transcription termination factor 2 [Ajellomyces capsulatus H88] Length = 1092 Score = 90.4 bits (223), Expect = 1e-16, Method: Composition-based stats. Identities = 37/170 (21%), Positives = 65/170 (38%), Gaps = 20/170 (11%) Query: 41 YYDEEKHWKEVHDEKIKALEVIIEKANAAPI--IVAYHFNSDLARLQKAFPQGR------ 92 Y K + + +E E + API IV + S L ++ A Sbjct: 907 YEGPHTKTKALISHLLDTIEESKEAPDEAPIKSIVFSSWTSHLDLIEIAMEDNGITTFTR 966 Query: 93 -----TLDKDPCTIQEWNEGK-IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 TL + I + E + +L A + G GLNL G + + ++ Q Sbjct: 967 LDGTMTLKQRNAAIDAFREDDNVTILLATLGAGGVGLNLTAGSRVYIM-EPQYNPAAIAQ 1025 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 ++R+ + G R V I +++I+E + + R K + D+ LN Sbjct: 1026 AVDRV-----HRLGQTREVTTIQFIMKDSIEEKIAELARKKQQMADMSLN 1070 >gi|317147437|ref|XP_001822137.2| nucleosome remodeling complex ATPase subunit (Snf2h) [Aspergillus oryzae RIB40] Length = 733 Score = 90.4 bits (223), Expect = 1e-16, Method: Composition-based stats. Identities = 28/147 (19%), Positives = 58/147 (39%), Gaps = 22/147 (14%) Query: 68 AAPIIVAYHFNSDLAR-------LQKAFPQGRTLDKDPCTIQ---------EWNEGKIPL 111 II+ +FN L +QK R + D T N+ + + Sbjct: 527 GRKIIIFSNFNQALNLCEDLLLTIQKNGDPVRYVRLDGSTSNARRNLSIYLFQNDPRYMV 586 Query: 112 LFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLI 171 + G GLNL + ++F W+ + +Q R+ + G K V ++ L Sbjct: 587 FLISIRAGGEGLNL-VSSSTVIFLDEDWNPQVMRQAEARV-----HRIGQKHPVRIFKLQ 640 Query: 172 AQNTIDELVLQRLRTKSTIQDLLLNAL 198 ++ T++E + +R+ K+ + ++ + Sbjct: 641 SKGTVEEQISRRIVKKAYVATKIMEDI 667 >gi|307210254|gb|EFN86904.1| Chromodomain-helicase-DNA-binding protein 1 [Harpegnathos saltator] Length = 1825 Score = 90.4 bits (223), Expect = 1e-16, Method: Composition-based stats. Identities = 26/144 (18%), Positives = 55/144 (38%), Gaps = 18/144 (12%) Query: 67 NAAPIIVAYHFNSDLARL-----QKAFPQGRTLDK-----DPCTIQEWN-EGKIPL-LFA 114 +++ L + +K FP R + +N EG Sbjct: 772 KGHRVLIFSQMVRMLDIIGEYLQKKHFPFQRLDGSIKGELRKQALDHFNAEGSTDFCFLL 831 Query: 115 HPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQN 174 + G G+NL + ++ F W+ + Q R + G K V +Y L+ +N Sbjct: 832 STRAGGLGINL-ATADTVIIFDSDWNPQNDLQAQAR-----AHRIGQKNQVNIYRLVTKN 885 Query: 175 TIDELVLQRLRTKSTIQDLLLNAL 198 +++E +++R + K + L++ + Sbjct: 886 SVEEEIVERAKQKMVLDHLVIQRM 909 >gi|238496023|ref|XP_002379247.1| nucleosome remodeling complex ATPase subunit (Snf2h), putative [Aspergillus flavus NRRL3357] gi|220694127|gb|EED50471.1| nucleosome remodeling complex ATPase subunit (Snf2h), putative [Aspergillus flavus NRRL3357] Length = 917 Score = 90.4 bits (223), Expect = 1e-16, Method: Composition-based stats. Identities = 28/147 (19%), Positives = 58/147 (39%), Gaps = 22/147 (14%) Query: 68 AAPIIVAYHFNSDLAR-------LQKAFPQGRTLDKDPCTIQ---------EWNEGKIPL 111 II+ +FN L +QK R + D T N+ + + Sbjct: 542 GRKIIIFSNFNQALNLCEDLLLTIQKNGDPVRYVRLDGSTSNARRNLSIYLFQNDPRYMV 601 Query: 112 LFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLI 171 + G GLNL + ++F W+ + +Q R+ + G K V ++ L Sbjct: 602 FLISIRAGGEGLNL-VSSSTVIFLDEDWNPQVMRQAEARV-----HRIGQKHPVRIFKLQ 655 Query: 172 AQNTIDELVLQRLRTKSTIQDLLLNAL 198 ++ T++E + +R+ K+ + ++ + Sbjct: 656 SKGTVEEQISRRIVKKAYVATKIMEDI 682 >gi|302791607|ref|XP_002977570.1| hypothetical protein SELMODRAFT_106921 [Selaginella moellendorffii] gi|300154940|gb|EFJ21574.1| hypothetical protein SELMODRAFT_106921 [Selaginella moellendorffii] Length = 492 Score = 90.4 bits (223), Expect = 1e-16, Method: Composition-based stats. Identities = 24/153 (15%), Positives = 56/153 (36%), Gaps = 20/153 (13%) Query: 56 IKALEVIIEKANAAPIIVAYHFNSDLARLQKAFP-----------QGRTLDKDPCTIQEW 104 + L ++ +N +++ F L L+ + R ++ I + Sbjct: 291 LNKLLPMLRDSNRR-VLIFSQFTIMLDILEDYLSSEGYTFERIDGKIRGSERQQAAIDRY 349 Query: 105 --NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFK 162 N+ K + G G+ L + + + W+ + Q + R + G Sbjct: 350 SANDCKTFAFLLSTRAGGLGITLT-AADTCIIYDSDWNPQNDLQAMARC-----HRIGQT 403 Query: 163 RAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 + V +Y LI +NT ++ + + K + + +L Sbjct: 404 KDVRIYRLITRNTYEQHLFECSSRKYGLDEAVL 436 >gi|281350318|gb|EFB25902.1| hypothetical protein PANDA_008326 [Ailuropoda melanoleuca] Length = 1566 Score = 90.4 bits (223), Expect = 1e-16, Method: Composition-based stats. Identities = 27/153 (17%), Positives = 56/153 (36%), Gaps = 21/153 (13%) Query: 68 AAPIIVAYHFNSDLARLQKAFP---------QGRTLDK-DPCTIQEWN-EGKIPL-LFAH 115 +++ L L + G + + +N EG Sbjct: 658 GNRVLIFSQMVRMLDILAEYLKYRQFPFQRLDGSIKGELRKQALDHFNAEGSEDFCFLLS 717 Query: 116 PASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNT 175 + G G+NL + +V F W+ + Q R + G K+ V +Y L+ + + Sbjct: 718 TRAGGLGINL-ASADTVVIFDSDWNPQNDLQAQAR-----AHRIGQKKQVNIYRLVTKGS 771 Query: 176 IDELVLQRLRTKSTIQDLL---LNALKKETIHV 205 ++E +L+R + K + L+ ++ K +H Sbjct: 772 VEEDILERAKKKMVLDHLVIQRMDTTGKTVLHT 804 >gi|164424946|ref|XP_958315.2| hypothetical protein NCU09106 [Neurospora crassa OR74A] gi|157070726|gb|EAA29079.2| conserved hypothetical protein [Neurospora crassa OR74A] Length = 911 Score = 90.4 bits (223), Expect = 1e-16, Method: Composition-based stats. Identities = 40/209 (19%), Positives = 86/209 (41%), Gaps = 22/209 (10%) Query: 1 MKQYHKFQ-RELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKAL 59 MK+ + + R+ + ++A + + C + + W E K++AL Sbjct: 679 MKKVDQSELRQPKIEHLINELKALSDFELHLWCRDYKCIRQFDLPDGSWME--SAKVQAL 736 Query: 60 EVIIEK--ANAAPIIVAYHFNSDLA---------RLQKAFPQGRT-LDKDPCTIQEWN-E 106 +I++ N +V F + +++ QG T + + I ++N + Sbjct: 737 LKLIKQYQKNGDRALVFTRFAKVIEILGECLASEKIEYLSLQGNTDVSERQELINDFNAD 796 Query: 107 GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVF 166 IP+ S G G+NL N ++ F + ++ Q R + G R V Sbjct: 797 ATIPVFLLTTGSGGTGINLT-AANKVIIFDQSDNPQDDIQA-----ENRAHRLGQTRPVE 850 Query: 167 VYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 + LI+++T++ELV + + K + + ++ Sbjct: 851 IVRLISKDTVEELVYKACQKKLELANKVV 879 >gi|310793157|gb|EFQ28618.1| SNF2 family domain-containing protein [Glomerella graminicola M1.001] Length = 1813 Score = 90.4 bits (223), Expect = 1e-16, Method: Composition-based stats. Identities = 31/154 (20%), Positives = 64/154 (41%), Gaps = 18/154 (11%) Query: 55 KIKALEVIIEKAN--AAPIIVAYHFNSDLARLQKAFPQGR----------TLDKDPCTIQ 102 K++ L I+ ++ +++ + L F Q + + + I+ Sbjct: 1278 KVRLLVAILNESESVGDKVLIFTQSIPTMDYLDSLFRQQKRKVARLDGNTPISQRQQNIK 1337 Query: 103 EWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFK 162 ++N G L A+ G GLN+ +G N +V F ++ QQ I R + G + Sbjct: 1338 DFNSGDTQLYIISTAAGGTGLNI-FGANRVVIFDFKYNPIHEQQAIGR-----AYRIGQQ 1391 Query: 163 RAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + V+VY I T ++ + R K+ + +++ Sbjct: 1392 KPVYVYTFICGGTYEQTLHDRAIFKTHLASRVVD 1425 >gi|240276494|gb|EER40006.1| DNA repair and recombination protein RAD26 [Ajellomyces capsulatus H143] Length = 819 Score = 90.4 bits (223), Expect = 1e-16, Method: Composition-based stats. Identities = 27/151 (17%), Positives = 54/151 (35%), Gaps = 24/151 (15%) Query: 53 DEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIP 110 K++ ++ ++E + ++ L L++ I Sbjct: 480 SGKMQVVKSLLELWRDTGHKTLLFAQHRIMLDILERFII----------------SMDIH 523 Query: 111 LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYL 170 + G G+NL G + ++ + W+ Q ER + G KR V +Y L Sbjct: 524 VFLLTTKVGGLGVNLT-GADRVIIYDPDWNPSTDVQARERAW-----RLGQKREVTIYRL 577 Query: 171 IAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 + TI+E + R K + + +L K+ Sbjct: 578 MTAGTIEEKIYHRQIFKQFLTNKILKDPKQR 608 >gi|73951996|ref|XP_848459.1| PREDICTED: similar to chromodomain helicase DNA binding protein 1 isoform 2 [Canis familiaris] Length = 1711 Score = 90.4 bits (223), Expect = 1e-16, Method: Composition-based stats. Identities = 27/153 (17%), Positives = 56/153 (36%), Gaps = 21/153 (13%) Query: 68 AAPIIVAYHFNSDLARLQKAFP---------QGRTLDK-DPCTIQEWN-EGKIPL-LFAH 115 +++ L L + G + + +N EG Sbjct: 803 GNRVLIFSQMVRMLDILAEYLKYRQFPFQRLDGSIKGELRKQALDHFNAEGSEDFCFLLS 862 Query: 116 PASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNT 175 + G G+NL + +V F W+ + Q R + G K+ V +Y L+ + + Sbjct: 863 TRAGGLGINL-ASADTVVIFDSDWNPQNDLQAQAR-----AHRIGQKKQVNIYRLVTKGS 916 Query: 176 IDELVLQRLRTKSTIQDLL---LNALKKETIHV 205 ++E +L+R + K + L+ ++ K +H Sbjct: 917 VEEDILERAKKKMVLDHLVIQRMDTTGKTVLHT 949 >gi|302786786|ref|XP_002975164.1| hypothetical protein SELMODRAFT_102612 [Selaginella moellendorffii] gi|300157323|gb|EFJ23949.1| hypothetical protein SELMODRAFT_102612 [Selaginella moellendorffii] Length = 492 Score = 90.4 bits (223), Expect = 1e-16, Method: Composition-based stats. Identities = 24/153 (15%), Positives = 56/153 (36%), Gaps = 20/153 (13%) Query: 56 IKALEVIIEKANAAPIIVAYHFNSDLARLQKAFP-----------QGRTLDKDPCTIQEW 104 + L ++ +N +++ F L L+ + R ++ I + Sbjct: 291 LNKLLPMLRDSNRR-VLIFSQFTIMLDILEDYLSSEGYTFERIDGKIRGSERQQAAIDRY 349 Query: 105 --NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFK 162 N+ K + G G+ L + + + W+ + Q + R + G Sbjct: 350 SANDCKTFAFLLSTRAGGLGITLT-AADTCIIYDSDWNPQNDLQAMARC-----HRIGQT 403 Query: 163 RAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 + V +Y LI +NT ++ + + K + + +L Sbjct: 404 KDVRIYRLITRNTYEQHLFECSSRKYGLDEAVL 436 >gi|311743689|ref|ZP_07717495.1| possible DNA helicase [Aeromicrobium marinum DSM 15272] gi|311312819|gb|EFQ82730.1| possible DNA helicase [Aeromicrobium marinum DSM 15272] Length = 594 Score = 90.4 bits (223), Expect = 1e-16, Method: Composition-based stats. Identities = 45/224 (20%), Positives = 87/224 (38%), Gaps = 35/224 (15%) Query: 2 KQYHKFQRELYCDL-QGENIEAFNSASKTVKCLQLANGAVYYD-------------EEKH 47 K Y F+ E+ +L G ++ + SK +LA+ A + E++H Sbjct: 359 KVYDDFEAEMLAELPDGTELQVMDVMSKFGHLSRLASAAADVEVTYGPDVDQVTGLEKRH 418 Query: 48 WK---EVHDEKIKALEVIIEKANAAPIIVAYHFN---------SDLARLQ-KAFPQGRTL 94 + K+ AL ++++ P++V + A L+ G+T+ Sbjct: 419 VSLTLKDPSWKVDALLEVLDERPGQPVVVFAPSRQLVTLAGEAAAKAGLRVGYIVGGQTM 478 Query: 95 DKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 + T+ + G++ ++ + G GL L +VF W L E Q +R Sbjct: 479 TERTATVTAFQGGELDVVCVTTGAGGVGLTLT-AAKTVVFLQRPWSLVESIQAEDRC--- 534 Query: 155 RQRQAG--FKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + G + + ++A+NTID V LR ++ L+ Sbjct: 535 --HRIGSEQHDCIEIVDIVARNTIDTRVRAVLRERAGQLADLVQ 576 >gi|45384402|ref|NP_990272.1| chromodomain-helicase-DNA-binding protein 1 [Gallus gallus] gi|2501846|gb|AAC60282.1| chromo-helicase-DNA-binding on the Z chromosome protein [Gallus gallus] Length = 1808 Score = 90.4 bits (223), Expect = 1e-16, Method: Composition-based stats. Identities = 27/153 (17%), Positives = 56/153 (36%), Gaps = 21/153 (13%) Query: 68 AAPIIVAYHFNSDLARLQKAFP---------QGRTLDK-DPCTIQEWN-EGKIPL-LFAH 115 +++ L L + G + + +N EG Sbjct: 801 GNRVLIFSQMVRMLDILAEYLKYRQFPFQRLDGSIKGELRKQALDHFNAEGSEDFCFLLS 860 Query: 116 PASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNT 175 + G G+NL + +V F W+ + Q R + G K+ V +Y L+ + + Sbjct: 861 TRAGGLGINL-ASADTVVIFDSDWNPQNDLQAQAR-----AHRIGQKKQVNIYRLVTKGS 914 Query: 176 IDELVLQRLRTKSTIQDLL---LNALKKETIHV 205 ++E +L+R + K + L+ ++ K +H Sbjct: 915 VEEDILERAKKKMVLDHLVIQRMDTTGKTVLHT 947 >gi|323349632|gb|EGA83848.1| Isw1p [Saccharomyces cerevisiae Lalvin QA23] Length = 1101 Score = 90.4 bits (223), Expect = 1e-16, Method: Composition-based stats. Identities = 36/223 (16%), Positives = 82/223 (36%), Gaps = 39/223 (17%) Query: 7 FQRELYCDLQGENIEAFNSAS--------KTVKCLQLAN-------------GAVYYDEE 45 Q++ Y + ++++A N ++ +QL G Y +E Sbjct: 408 MQKKWYKKILEKDLDAVNGSNGSKESKTRLLNIMMQLRKCCNHPYLFDGAEPGPPYTTDE 467 Query: 46 KHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQ---------KAFPQGRTLDK 96 ++ + K + +++ + L L+ G T + Sbjct: 468 HLVYNAAKLQVLDKLLKKLKEXGSRVLIFSQMSRLLDILEDYCYFRNYEYCRIDGSTAHE 527 Query: 97 DP-CTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGV 153 D I ++N + + G G+NL +++V + W+ + Q ++R Sbjct: 528 DRIQAIDDYNAPDSKKFVFLLTTRAGGLGINLT-SADVVVLYDSDWNPQADLQAMDR--- 583 Query: 154 TRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + G K+ V V+ L+ N+++E +L+R K + L++ Sbjct: 584 --AHRIGQKKQVKVFRLVTDNSVEEKILERATQKLRLDQLVIQ 624 >gi|156523172|ref|NP_001096000.1| DNA excision repair protein ERCC-6-like [Bos taurus] gi|182645386|sp|A6QQR4|ERC6L_BOVIN RecName: Full=DNA excision repair protein ERCC-6-like; AltName: Full=ATP-dependent helicase ERCC6-like gi|151554062|gb|AAI49964.1| ERCC6L protein [Bos taurus] gi|296470840|gb|DAA12955.1| DNA excision repair protein ERCC-6-like [Bos taurus] Length = 1242 Score = 90.4 bits (223), Expect = 1e-16, Method: Composition-based stats. Identities = 25/152 (16%), Positives = 50/152 (32%), Gaps = 20/152 (13%) Query: 53 DEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQKAFPQGRTL------------DKDP 98 K+ L +++K +V L +++ +++ Sbjct: 461 SGKMLFLMDLLKKLRDEGHQTLVFSQSRRILNIIERLLKNRHFKILRIDGTITHLVEREK 520 Query: 99 CTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQ 158 + G GL L + +V F W+ Q ++R+ + Sbjct: 521 RISLFQQNKDYSVFLLTTQVGGVGLTLT-AASRVVIFDPSWNPATDAQAVDRV-----YR 574 Query: 159 AGFKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 G K V VY LI T++E + +R K ++ Sbjct: 575 IGQKENVVVYRLITCGTVEEKIYRRQVFKDSL 606 >gi|325187562|emb|CCA22100.1| Putative SWI/SNF related putative [Albugo laibachii Nc14] Length = 1114 Score = 90.4 bits (223), Expect = 1e-16, Method: Composition-based stats. Identities = 38/231 (16%), Positives = 82/231 (35%), Gaps = 44/231 (19%) Query: 2 KQY---HKFQRELYCDLQGENIEAFNSAS------KTVKCLQLAN-------------GA 39 K Y + QRE Y + + N+ +QL G Sbjct: 419 KLYVGLSEMQREWYMRVLHRDAAHLNAIGGSDRVRLLNILMQLRKVCNHPYLFEGAEPGP 478 Query: 40 VYYDEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAF--------- 88 Y + W+ + K+ L ++ K A + ++ S + L+ Sbjct: 479 PYLEGPHLWE--NCGKLTLLHRLLPKLKAQGSRALIFCQMTSMMDILEDYMRYFNHEYCR 536 Query: 89 PQGRTLDKDPC-TIQEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQ 145 G+T ++ ++E+N + G G+NL +I++ + W+ + Sbjct: 537 LDGQTKGEERDIMMEEFNSPGSTTFCFLLSTRAGGLGINL-ATADIVILYDSDWNPQVDL 595 Query: 146 QMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 Q ++R + G + V V+ I+ T++E +++R K + ++ Sbjct: 596 QAMDR-----AHRIGQTKTVRVFRFISDGTVEEKIVERAERKLYLDAAIIQ 641 >gi|322697909|gb|EFY89684.1| putative helicase-DNA-binding protein [Metarhizium acridum CQMa 102] Length = 1508 Score = 90.4 bits (223), Expect = 1e-16, Method: Composition-based stats. Identities = 31/166 (18%), Positives = 66/166 (39%), Gaps = 20/166 (12%) Query: 52 HDEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQKAFP----QGRTLDKDPCT----- 100 K+ LE ++ K +++ F L ++ Q R LD + + Sbjct: 996 ASAKLLLLEQMLPKLKERGHRVLIFSQFLQQLDIIEDFLIGIGYQYRRLDGNLSSLEKQR 1055 Query: 101 -IQEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 I +NE I + G G+NL + ++ ++ + Q + R Sbjct: 1056 RIDAYNEPGSAIFAFLLSTRAGGVGINL-ATADTVIIMDPDFNPHQDIQALSR-----AH 1109 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETI 203 + G K+ V + L+ ++T++E ++Q + K + L+ +L + I Sbjct: 1110 RIGQKQKVLCFQLMTKDTVEERIMQIGKKKMALDHALIESLDDDEI 1155 >gi|320580373|gb|EFW94596.1| chromatin remodelling complex ATPase chain ISW1 [Pichia angusta DL-1] Length = 1018 Score = 90.4 bits (223), Expect = 1e-16, Method: Composition-based stats. Identities = 41/230 (17%), Positives = 88/230 (38%), Gaps = 43/230 (18%) Query: 6 KFQRELYCDLQGENIEAFNSAS--------KTVKCLQLAN-------------GAVYYDE 44 Q + Y +L ++I+A N A +QL G Y + Sbjct: 358 DMQIKWYRNLLEKDIDAVNGAIGKREGKTRLLNIVMQLRKCCNHPYLFEGAEPGPPYTTD 417 Query: 45 EKHWKEVHDEKIKALEVIIE--KANAAPIIVAYHFNSDLARL---------QKAFPQGRT 93 E + K+ L+ +++ ++ + +++ + L L Q G T Sbjct: 418 EHLV--YNSGKMIVLDKLLKKLQSEGSRVLIFSQMSRLLDILEDYCYLRGYQYCRIDGST 475 Query: 94 LDKDP-CTIQEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 ++ +I ++N+ + + G G+NL + +V + W+ + Q ++R Sbjct: 476 AHEERIQSIDDFNKPGSDKFIFLLTTRAGGLGINLTT-ADAVVLYDSDWNPQADLQAMDR 534 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKK 200 + G K+ V V+ + +N I+E VL+R K + L++ + Sbjct: 535 -----AHRIGQKKQVKVFRFVTENAIEEKVLERAAQKLRLDQLVIQQGRA 579 >gi|301768523|ref|XP_002919680.1| PREDICTED: chromodomain-helicase-DNA-binding protein 1-like [Ailuropoda melanoleuca] Length = 1742 Score = 90.4 bits (223), Expect = 1e-16, Method: Composition-based stats. Identities = 27/153 (17%), Positives = 56/153 (36%), Gaps = 21/153 (13%) Query: 68 AAPIIVAYHFNSDLARLQKAFP---------QGRTLDK-DPCTIQEWN-EGKIPL-LFAH 115 +++ L L + G + + +N EG Sbjct: 834 GNRVLIFSQMVRMLDILAEYLKYRQFPFQRLDGSIKGELRKQALDHFNAEGSEDFCFLLS 893 Query: 116 PASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNT 175 + G G+NL + +V F W+ + Q R + G K+ V +Y L+ + + Sbjct: 894 TRAGGLGINL-ASADTVVIFDSDWNPQNDLQAQAR-----AHRIGQKKQVNIYRLVTKGS 947 Query: 176 IDELVLQRLRTKSTIQDLL---LNALKKETIHV 205 ++E +L+R + K + L+ ++ K +H Sbjct: 948 VEEDILERAKKKMVLDHLVIQRMDTTGKTVLHT 980 >gi|303318849|ref|XP_003069424.1| HSA family protein [Coccidioides posadasii C735 delta SOWgp] gi|240109110|gb|EER27279.1| HSA family protein [Coccidioides posadasii C735 delta SOWgp] Length = 1415 Score = 90.4 bits (223), Expect = 1e-16, Method: Composition-based stats. Identities = 40/225 (17%), Positives = 84/225 (37%), Gaps = 33/225 (14%) Query: 2 KQYHKFQ--RELYCDLQGENIEAFNSAS-KTVKCLQLANGAV---YYDEEKHWKEVHDE- 54 K Y + ++ S ++ +L N +EE + + ++ Sbjct: 793 KLYKQLVTHNKMVVSDGKGGKTGMRGLSNMLMQLRKLCNHPFVFESVEEEMNPGKGTNDL 852 Query: 55 ------KIKALEVIIEK--ANAAPIIVAYH------FNSDLAR---LQKAFPQGRTL-DK 96 K + L+ I+ K A+ +++ + D R L+ G T D Sbjct: 853 IWRTAGKFELLDRILPKFKASGHRVLMFFQMTQIMNIMEDFLRFRGLKYLRLDGSTKSDD 912 Query: 97 DPCTIQEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 ++ +N+ + + G GLNLQ + ++ + W+ + Q Sbjct: 913 RSELLRRFNDPGSEYFCFLLSTRAGGLGLNLQT-ADTVIIYDSDWNPHQDLQA-----QD 966 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 R + G K V + LI+ N+++E +L+R + K + ++ A K Sbjct: 967 RAHRIGQKNEVRILRLISSNSVEERILERAQFKLDMDGKVIQAGK 1011 >gi|115491355|ref|XP_001210305.1| hypothetical protein ATEG_00219 [Aspergillus terreus NIH2624] gi|114197165|gb|EAU38865.1| hypothetical protein ATEG_00219 [Aspergillus terreus NIH2624] Length = 1459 Score = 90.4 bits (223), Expect = 1e-16, Method: Composition-based stats. Identities = 30/151 (19%), Positives = 59/151 (39%), Gaps = 20/151 (13%) Query: 51 VHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQKAFP----QGRTLD------KDP 98 K+ L+ ++ K + +++ L L + Q + LD Sbjct: 745 TSSGKMMLLDQLLAKLKRDGHRVLIFSQMVKMLDLLGEYMEFRGYQYQRLDGTIAAASRR 804 Query: 99 CTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 I+ +N + G G+NL + +V F W+ + Q + R Sbjct: 805 LAIEHFNAPGSSDFAFILSTRAGGLGINLMT-ADTVVLFDSDWNPQADLQAMAR-----A 858 Query: 157 RQAGFKRAVFVYYLIAQNTIDELVLQRLRTK 187 + G + V VY L++++T++E V++R R K Sbjct: 859 HRIGQTKPVSVYRLVSKDTVEEEVIERARNK 889 >gi|318040737|ref|ZP_07972693.1| SNF2 family DNA/RNA helicase [Synechococcus sp. CB0101] Length = 1043 Score = 90.4 bits (223), Expect = 1e-16, Method: Composition-based stats. Identities = 28/194 (14%), Positives = 63/194 (32%), Gaps = 30/194 (15%) Query: 26 ASKTVKCLQLANG---AVYYDEEKHWKEVH------DEKIK--ALEVIIEKANAAPIIVA 74 + K Q+ N A+ D + K++ + ++ Sbjct: 832 LALLTKLKQICNHPALALKQDPDPSDVGFFKEFAARSAKVQRLEEILEEVIEAGDRALLF 891 Query: 75 YHF----NSDLARLQKAFPQGRT-------LDKDPCTIQEWNEG--KIPLLFAHPASCGH 121 F + A L++ + Q + + + E L + G Sbjct: 892 TQFAEWGHLLKAHLEQRWKQPVPFLYGNTSKAERQAMVDRFQEDPRGPQLFLLSLKAGGV 951 Query: 122 GLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVL 181 GLNL + + WW+ Q +R + G + V V+ I +++E + Sbjct: 952 GLNLTRASH-VFHIDRWWNPAVENQATDR-----AYRIGQQNRVMVHKFITSGSVEERID 1005 Query: 182 QRLRTKSTIQDLLL 195 + ++ KS + + ++ Sbjct: 1006 RMIKEKSKLAEDIV 1019 >gi|298705620|emb|CBJ28871.1| conserved unknown protein [Ectocarpus siliculosus] Length = 1406 Score = 90.4 bits (223), Expect = 1e-16, Method: Composition-based stats. Identities = 32/162 (19%), Positives = 63/162 (38%), Gaps = 21/162 (12%) Query: 55 KIKALEVIIEK-ANAAPIIVAYHFNSDLARLQKA----------FPQGRTLDKDPCTIQE 103 K++ L+V++E+ N +++ + + L LQ D+ I Sbjct: 745 KMRTLKVLLERFKNKHKVLLFSYSTAMLDILQALCSSQGYTFLKLDGNTAKDQRQKMIDR 804 Query: 104 W---NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 + N + + + G GLNLQ + ++ + + W+ + Q +R + G Sbjct: 805 FTKQNAIQNNVFLISTTAGGTGLNLQ-AASKVILYDVNWNPAQDAQAEDR-----AYRIG 858 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKET 202 + V V+ L++ TI+EL R K + K E Sbjct: 859 QLKEVEVFRLVSTGTIEELTYMRQIYKLQTSAATM-GEKAEG 899 >gi|17561718|ref|NP_503548.1| hypothetical protein F59A7.8 [Caenorhabditis elegans] gi|2291218|gb|AAB65339.1| Hypothetical protein F59A7.8 [Caenorhabditis elegans] Length = 518 Score = 90.4 bits (223), Expect = 1e-16, Method: Composition-based stats. Identities = 27/106 (25%), Positives = 46/106 (43%), Gaps = 8/106 (7%) Query: 94 LDKDPCTIQEWN--EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERI 151 + + +N +G + + G GLNL GGN L+ L W+ QQ +RI Sbjct: 391 IKDRQERVDSFNQEKGGAQDMLLSLTAGGVGLNL-IGGNHLIMVDLHWNPALEQQACDRI 449 Query: 152 GVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + G K+ V ++ LI + TI++ V+ K + +L Sbjct: 450 -----YRMGQKKEVHIHRLIVKETIEQRVMSLQEKKLALAASVLEG 490 >gi|67523645|ref|XP_659882.1| hypothetical protein AN2278.2 [Aspergillus nidulans FGSC A4] gi|40745233|gb|EAA64389.1| hypothetical protein AN2278.2 [Aspergillus nidulans FGSC A4] gi|259487671|tpe|CBF86520.1| TPA: catalytic subunit of the SWI/SNF chromatin remodeling complex (Eurofung) [Aspergillus nidulans FGSC A4] Length = 1407 Score = 90.4 bits (223), Expect = 1e-16, Method: Composition-based stats. Identities = 32/159 (20%), Positives = 61/159 (38%), Gaps = 20/159 (12%) Query: 55 KIKALEVIIEK--ANAAPIIVAYHFNSD---------LARLQKAFPQGRTLDKDPCTI-Q 102 K + L+ I+ K A +++ + L ++ G T D + + Sbjct: 857 KFELLDRILPKFKATGHRVLMFFQMTQIMNIMEDFLRLRGMKYLRLDGSTKSDDRSDLLK 916 Query: 103 EWNEGKIPLL--FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 +N + G GLNLQ + ++ F W+ + Q R + G Sbjct: 917 LFNAPDSEYFCFLLSTRAGGLGLNLQT-ADTVIIFDSDWNPHQDLQA-----QDRAHRIG 970 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 K V + LI N+++E +L+R + K + ++ A K Sbjct: 971 QKNEVRILRLITSNSVEEKILERAQFKLDMDGKVIQAGK 1009 >gi|317037066|ref|XP_001398335.2| SNF2 family helicase [Aspergillus niger CBS 513.88] Length = 917 Score = 90.4 bits (223), Expect = 1e-16, Method: Composition-based stats. Identities = 32/162 (19%), Positives = 63/162 (38%), Gaps = 23/162 (14%) Query: 52 HDEKIKALEVIIEK---ANAAPIIVAYHFNSDLARLQKAF-----------PQGRTLDKD 97 KI+AL I+ A ++ + S L ++ + ++ +D Sbjct: 742 PSSKIEALIKILTAKGQAQGTKTVIFSQWTSFLDLIEPHLFRHGIGFARIDGKMSSISRD 801 Query: 98 PCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 T++ + +L A + C GLNL N + WW Q ++R+ Sbjct: 802 NSTLRFSTDPSCTVLLASLSVCSVGLNL-VAANQAILCDSWWAPAIEDQAVDRV-----Y 855 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 + G R V+ L+ +++I++ VL K + +L A + Sbjct: 856 RLGQTRETTVWRLVMEDSIEDRVLAIQENKRKL---MLEAFR 894 >gi|315048263|ref|XP_003173506.1| hypothetical protein MGYG_03681 [Arthroderma gypseum CBS 118893] gi|311341473|gb|EFR00676.1| hypothetical protein MGYG_03681 [Arthroderma gypseum CBS 118893] Length = 1358 Score = 90.4 bits (223), Expect = 1e-16, Method: Composition-based stats. Identities = 39/225 (17%), Positives = 77/225 (34%), Gaps = 33/225 (14%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQL---ANGAVYYDE----------EKHW 48 K Y + + + +QL N +D Sbjct: 784 KLYKQLVTHNKLAVSDGKGGKTPVRGLSNMLMQLRKLCNHPFVFDSVEEELNPGKATNDL 843 Query: 49 KEVHDEKIKALEVIIEK--ANAAPIIVAYH------FNSDLAR---LQKAFPQGRTLDKD 97 K + L+ I+ K A+ +++ + D R ++ G T D Sbjct: 844 IWRTAGKFELLDRILPKFLASGHRVLMFFQMTQIMNIMEDFMRFRGMKYLRLDGATKSDD 903 Query: 98 PCTI-QEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 + + +NE + + G GLNLQ + ++ + W+ + Q Sbjct: 904 RSDLLKRFNEPGSEYFCFLLSTRAGGLGLNLQT-ADTVIIYDSDWNPHQDLQA-----QD 957 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 R + G K V + LI+ N+++E +L+R + K + ++ A K Sbjct: 958 RAHRIGQKNEVRILRLISSNSVEERILERAQFKLDMDGKVIQAGK 1002 >gi|240281981|gb|EER45484.1| SHREC complex subunit Mit1 [Ajellomyces capsulatus H143] Length = 676 Score = 90.4 bits (223), Expect = 1e-16, Method: Composition-based stats. Identities = 27/159 (16%), Positives = 61/159 (38%), Gaps = 20/159 (12%) Query: 52 HDEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQKAFPQGRTLDKD----------PC 99 K++ LE+++ K +++ F +L ++ L + Sbjct: 87 ASSKLQLLEMLLPKLQERGHRVLIFSQFLDNLDVMEDFLDGLGLLHRRLDGSMTSLQKQK 146 Query: 100 TIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 I E+N P S G G+NL + +V ++ + Q + R Sbjct: 147 QIDEFNVPGSPYFAFLLSTRSGGVGINL-ATADTVVIMDPDFNPHQDIQALSR-----AH 200 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + G ++ V V+ L+ + + +E ++Q + K + +L+ Sbjct: 201 RIGQRKKVLVFQLVTKGSAEEKIMQMGKKKMALDQVLIE 239 >gi|310793352|gb|EFQ28813.1| SNF2 family domain-containing protein [Glomerella graminicola M1.001] Length = 1599 Score = 90.4 bits (223), Expect = 1e-16, Method: Composition-based stats. Identities = 33/160 (20%), Positives = 62/160 (38%), Gaps = 20/160 (12%) Query: 52 HDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQKAFP----QGRTLDKD------PC 99 K+ L+ ++ K + ++V L L + + LD Sbjct: 760 SSGKMMLLDQLLTKLKKDGHRVLVFSQMVKMLDILSDYMALRGYKFQRLDGTIAAGPRRM 819 Query: 100 TIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 I +N + G G+NL + +V F W+ + Q + R Sbjct: 820 AINHFNAEDSDDFCFLLSTRAGGLGINLMT-ADTVVIFDSDWNPQADLQAMGR-----AH 873 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + G K+ V +Y L+++ T++E VL+R R K ++ L + A Sbjct: 874 RIGQKKPVSIYRLVSKETVEEEVLERARNKLLLEYLTIQA 913 >gi|19075591|ref|NP_588091.1| SNF2 family helicase Rhp26 [Schizosaccharomyces pombe 972h-] gi|74698399|sp|Q9UR24|RHP26_SCHPO RecName: Full=DNA repair protein rhp26; AltName: Full=RAD26 homolog gi|5902438|dbj|BAA84456.1| Rhp26 [Schizosaccharomyces pombe] gi|6562902|emb|CAB62827.1| SNF2 family helicase Rhp26 [Schizosaccharomyces pombe] Length = 973 Score = 90.4 bits (223), Expect = 1e-16, Method: Composition-based stats. Identities = 35/175 (20%), Positives = 61/175 (34%), Gaps = 26/175 (14%) Query: 41 YYDEEKHWKEVHDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQ----------KAF 88 Y D EK K+K + ++ K ++ L L+ Sbjct: 618 YGDPEK------SGKLKVIRALLTLWKKQGHRTLLFSQTRQMLDILEIGLKDLPDVHYCR 671 Query: 89 PQGRTLDKDPCT-IQEWNEGKI-PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 G T + +N+ + + G G+NL G + ++ F W+ Q Sbjct: 672 MDGSTSIALRQDLVDNFNKNEYFDVFLLTTRVGGLGVNLT-GADRVILFDPDWNPSTDAQ 730 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 ER + G K+ V VY L+ TI+E + R K + + +L K+ Sbjct: 731 ARERAW-----RLGQKKDVVVYRLMTAGTIEEKIYHRQIFKQFLTNKILKDPKQR 780 >gi|118343653|ref|NP_001071647.1| chromo-helicase DNA-binding protein [Taeniopygia guttata] gi|28975395|gb|AAO61783.1| chromo-helicase DNA-binding protein [Taeniopygia guttata] Length = 1806 Score = 90.4 bits (223), Expect = 1e-16, Method: Composition-based stats. Identities = 27/153 (17%), Positives = 56/153 (36%), Gaps = 21/153 (13%) Query: 68 AAPIIVAYHFNSDLARLQKAFP---------QGRTLDK-DPCTIQEWN-EGKIPL-LFAH 115 +++ L L + G + + +N EG Sbjct: 805 GNRVLIFSQMVRMLDILAEYLKYRQFPFQRLDGSIKGELRKQALDHFNAEGSEDFCFLLS 864 Query: 116 PASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNT 175 + G G+NL + +V F W+ + Q R + G K+ V +Y L+ + + Sbjct: 865 TRAGGLGINL-ASADTVVIFDSDWNPQNDLQAQAR-----AHRIGQKKQVNIYRLVTKGS 918 Query: 176 IDELVLQRLRTKSTIQDLL---LNALKKETIHV 205 ++E +L+R + K + L+ ++ K +H Sbjct: 919 VEEDILERAKKKMVLDHLVIQRMDTTGKTVLHT 951 >gi|303317828|ref|XP_003068916.1| SNF2 family N-terminal domain containing protein [Coccidioides posadasii C735 delta SOWgp] gi|240108597|gb|EER26771.1| SNF2 family N-terminal domain containing protein [Coccidioides posadasii C735 delta SOWgp] Length = 961 Score = 90.4 bits (223), Expect = 1e-16, Method: Composition-based stats. Identities = 25/104 (24%), Positives = 45/104 (43%), Gaps = 9/104 (8%) Query: 96 KDPCTIQEWN---EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIG 152 K + ++N + G GLNL G + LV F + W+ Q + RI Sbjct: 699 KRQFLVDDFNRSSSKSCFAFLLSAKAGGIGLNLT-GASRLVLFDVDWNPATDIQAMARI- 756 Query: 153 VTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + G KR +Y ++ + ++E + QR TK + D +++ Sbjct: 757 ----HRDGQKRHCHIYRMLLRGGLEEKIWQRQVTKLGLADSVMD 796 >gi|126658928|ref|ZP_01730070.1| hypothetical protein CY0110_26537 [Cyanothece sp. CCY0110] gi|126619726|gb|EAZ90453.1| hypothetical protein CY0110_26537 [Cyanothece sp. CCY0110] Length = 1046 Score = 90.4 bits (223), Expect = 1e-16, Method: Composition-based stats. Identities = 21/107 (19%), Positives = 42/107 (39%), Gaps = 8/107 (7%) Query: 96 KDPCTIQEWNEGKI--PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGV 153 + I + + + G GLNL N + WW+ Q +R Sbjct: 921 QRQEMIDRFQHDPNGPRIFILSLKAGGTGLNLTR-ANHVFHIDRWWNPAVENQATDR--- 976 Query: 154 TRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKK 200 + G KR V V+ + T++E + + L +K + + +++ +K Sbjct: 977 --AFRLGQKRNVQVHKFVCIGTLEERINEMLESKQKLAEQTVDSGEK 1021 >gi|119186353|ref|XP_001243783.1| hypothetical protein CIMG_03224 [Coccidioides immitis RS] Length = 964 Score = 90.4 bits (223), Expect = 1e-16, Method: Composition-based stats. Identities = 25/104 (24%), Positives = 45/104 (43%), Gaps = 9/104 (8%) Query: 96 KDPCTIQEWN---EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIG 152 K + ++N + G GLNL G + LV F + W+ Q + RI Sbjct: 702 KRQFLVDDFNRSSSKSCFAFLLSAKAGGIGLNLT-GASRLVLFDVDWNPATDIQAMARI- 759 Query: 153 VTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + G KR +Y ++ + ++E + QR TK + D +++ Sbjct: 760 ----HRDGQKRHCHIYRMLLRGGLEEKIWQRQVTKLGLADSVMD 799 >gi|207343880|gb|EDZ71203.1| YJR035Wp-like protein [Saccharomyces cerevisiae AWRI1631] Length = 1046 Score = 90.4 bits (223), Expect = 1e-16, Method: Composition-based stats. Identities = 32/147 (21%), Positives = 54/147 (36%), Gaps = 18/147 (12%) Query: 56 IKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRT-LDKDPCTIQEWNEGKIPLLFA 114 + LE I + DL+ L G T + + +N + Sbjct: 641 LDILEEFISTKD-----------PDLSHLNYLRMDGTTNIKGRQSLVDRFNNESFDVFLL 689 Query: 115 HPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQN 174 G G+NL G N ++ F W+ Q ER + G KR V +Y L+ Sbjct: 690 TTRVGGLGVNLT-GANRIIIFDPDWNPSTDMQARERAW-----RIGQKREVSIYRLMVGG 743 Query: 175 TIDELVLQRLRTKSTIQDLLLNALKKE 201 +I+E + R K + + +L K++ Sbjct: 744 SIEEKIYHRQIFKQFLTNRILTDPKQK 770 >gi|290973846|ref|XP_002669658.1| DEAD/DEAH box helicase [Naegleria gruberi] gi|284083208|gb|EFC36914.1| DEAD/DEAH box helicase [Naegleria gruberi] Length = 1029 Score = 90.4 bits (223), Expect = 1e-16, Method: Composition-based stats. Identities = 41/212 (19%), Positives = 79/212 (37%), Gaps = 25/212 (11%) Query: 1 MKQYHKF--QRELYCDLQGENI--EAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKI 56 +K Y ++ RE+ L GE++ +A + K L D+ ++ K+ Sbjct: 545 VKIYDEYLKSREVTGTLDGEHLLFKAITNLRKVCNHPDLICTEKKPDDFGAVEK--SGKM 602 Query: 57 KALEVIIE--KANAAPIIVAYH----------FNSDLARLQKAFPQGRTLDKDPCTIQEW 104 +E ++ K +++ F + + + I ++ Sbjct: 603 MVVEKLLSLWKEQNHRVLLFSQSKKMLDVFEPFLQERDYTYSRMDGDTPVKERSVLINQF 662 Query: 105 N-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKR 163 N + KI + G G+NL G N ++ F W+ Q +ER + G + Sbjct: 663 NSDDKIFVFLLTTKVGGLGVNL-IGANRIILFDPDWNPSTDLQALERAW-----RLGQTK 716 Query: 164 AVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 V VY L+ TI+E + R K + + +L Sbjct: 717 QVTVYRLMTSGTIEEKMYHRQIFKQFLSNKVL 748 >gi|149408270|ref|YP_001294549.1| hypothetical protein ORF041 [Pseudomonas phage M6] Length = 564 Score = 90.4 bits (223), Expect = 1e-16, Method: Composition-based stats. Identities = 36/207 (17%), Positives = 78/207 (37%), Gaps = 39/207 (18%) Query: 20 IEAFNSASKTVKCLQLANGAVYYDEEKHW---KEVHDEKIKALEVIIEKANAAPIIVAYH 76 + A + ++ ++ Q+ G + D+E + ++ L +IE++ +IV Sbjct: 356 VIAALAITRLLRLQQITCGYLPTDDEAEPVYTIPGPNRRLDLLCELIEESQ-HKVIVWAR 414 Query: 77 FNSDLARLQKAFPQ---------GRTLDKDPCTIQEWNEGKIP----------------- 110 F D+ + A + G D + + +G+ P Sbjct: 415 FQMDITLIMDALRERGISAVRYDGLVNDDERADAKARFQGERPLYHNGQVVGREAVPPEE 474 Query: 111 ---LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFV 167 + +PA+ GL L ++++S + L + Q R + G V Sbjct: 475 QARVFVGNPAAGATGLTLT-AAKTVIYYSNSFKLIDRLQ-----SEDRAHRIGQTNNVLY 528 Query: 168 YYLIAQNTIDELVLQRLRTKSTIQDLL 194 L+A++++DE V++ LR K + + Sbjct: 529 IDLVAEDSVDEKVVEALRNKFNVASQI 555 >gi|328768321|gb|EGF78368.1| hypothetical protein BATDEDRAFT_35805 [Batrachochytrium dendrobatidis JAM81] Length = 1991 Score = 90.4 bits (223), Expect = 1e-16, Method: Composition-based stats. Identities = 25/144 (17%), Positives = 49/144 (34%), Gaps = 18/144 (12%) Query: 67 NAAPIIVAYHFNSDLARLQ----------KAFPQGRTLDKDPCTIQEWNEG--KIPLLFA 114 +++ L +Q + G D +I ++ + + Sbjct: 664 GGHKVLIFSQMTKCLDLIQDYLRSRGWLYERIDGGVRGDLRQASIDRFSAPGSESFVFLL 723 Query: 115 HPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQN 174 + G G+NL + + F W+ + Q R + G K+ V +Y LI +N Sbjct: 724 CTRAGGVGINLT-AADTCIIFDSDWNPQNDLQAQSRC-----HRIGQKKPVQIYRLITRN 777 Query: 175 TIDELVLQRLRTKSTIQDLLLNAL 198 T + + R K + LL + Sbjct: 778 TYEREMFDRASMKLGLDKALLQRM 801 >gi|226497978|ref|NP_001141839.1| chromatin complex subunit A 101 [Zea mays] gi|224029693|gb|ACN33922.1| unknown [Zea mays] Length = 837 Score = 90.4 bits (223), Expect = 1e-16, Method: Composition-based stats. Identities = 23/142 (16%), Positives = 55/142 (38%), Gaps = 18/142 (12%) Query: 66 ANAAPIIVAYHFNSDLARLQK----------AFPQGRTLDKDPCTIQEWN--EGKIPLLF 113 A +++ + L L+ L++ I E+N + + Sbjct: 611 ARKHKVLIFSQWTKVLDILEYYLDSKGLGVCRIDGSVNLEERRRQIAEFNDLNSSLNVFI 670 Query: 114 AHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQ 173 + G G+NL + + + W+ + QQ ++R + G R V VY L Sbjct: 671 LSTRAGGLGINLT-SADTCILYDSDWNPQMDQQAMDRC-----HRIGQTRPVHVYRLATS 724 Query: 174 NTIDELVLQRLRTKSTIQDLLL 195 +++E ++++ K ++ +++ Sbjct: 725 YSVEERIIKKAFGKLKLEHVVI 746 >gi|154273569|ref|XP_001537636.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1] gi|150415244|gb|EDN10597.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1] Length = 952 Score = 90.4 bits (223), Expect = 1e-16, Method: Composition-based stats. Identities = 28/165 (16%), Positives = 63/165 (38%), Gaps = 20/165 (12%) Query: 52 HDEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQKAFPQGRTLDKD----------PC 99 K++ LE+++ K +++ F +L ++ L + Sbjct: 515 ASSKLQLLEMLLPKLQERGHRVLIFSQFLDNLDVMEDFLDGLGLLHRRLDGSMTSLQKQK 574 Query: 100 TIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 I E+N P S G G+NL + +V ++ + Q + R Sbjct: 575 QIDEFNVPGSPYFAFLLSTRSGGVGINL-ATADTVVIMDPDFNPHQDIQALSR-----AH 628 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKET 202 + G ++ V V+ L+ + + +E ++Q + K + +L+ + E Sbjct: 629 RIGQRKKVLVFQLVTKGSAEEKIMQMGKKKMALDQVLIEHMDVEG 673 >gi|67523599|ref|XP_659859.1| hypothetical protein AN2255.2 [Aspergillus nidulans FGSC A4] gi|40744672|gb|EAA63828.1| hypothetical protein AN2255.2 [Aspergillus nidulans FGSC A4] gi|259487648|tpe|CBF86478.1| TPA: SNF2 family helicase/ATPase, putative (AFU_orthologue; AFUA_5G06600) [Aspergillus nidulans FGSC A4] Length = 1832 Score = 90.4 bits (223), Expect = 1e-16, Method: Composition-based stats. Identities = 30/147 (20%), Positives = 61/147 (41%), Gaps = 18/147 (12%) Query: 62 IIEKA--NAAPIIVAYHFNSDLARLQKAFP----QGRTLD------KDPCTIQEWNEGKI 109 II+++ ++V L L++ Q LD +++N+G+ Sbjct: 1356 IIDESIRAGDKVLVFSQSLHTLDYLERLLKVTNRQYSRLDGQTPAATRQAATKKFNQGEK 1415 Query: 110 PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYY 169 + + G GLN+ G N ++ F + +Q I R + G ++ VFVY Sbjct: 1416 QVYLISTRAGGLGLNIT-GANRVIIFDFSFSPIWEEQAIGR-----AYRLGQQKPVFVYR 1469 Query: 170 LIAQNTIDELVLQRLRTKSTIQDLLLN 196 IA T E++ ++ K+ + +++ Sbjct: 1470 FIAGGTFQEIIHEKATYKTQLAVRVVD 1496 >gi|324500144|gb|ADY40077.1| Chromodomain-helicase-DNA-binding protein 1 [Ascaris suum] Length = 1875 Score = 90.4 bits (223), Expect = 1e-16, Method: Composition-based stats. Identities = 35/222 (15%), Positives = 84/222 (37%), Gaps = 31/222 (13%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSAS-KTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 + Y + Y +L + N ++ + N A H++E +++ L Sbjct: 745 QYYKWILTKNYKELSKGVKGSINGFVNLIMELKKCCNHASLVRAYDHYEENAQARLQQLM 804 Query: 61 ------VIIEKA------NAAPIIVAYHFNSDLARLQ-----KAFPQGRTLDKDPCTIQE 103 ++++K +++ L +Q + FP R +++ Sbjct: 805 KSSGKLILLDKLLCRLHETGHRVLIFSQMVMMLDIVQEYLQLRRFPSQRLDGSMRADLRK 864 Query: 104 -----WN-EGKIPL-LFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 +N EG + G G+NL + ++ F W+ + Q + R Sbjct: 865 AALDHFNAEGSTDFCFLLSTRAGGLGINL-ATADTVIIFDSDWNPQNDLQAMSR-----A 918 Query: 157 RQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNAL 198 + G K+ V +Y L+ + +++E +++R + K + L++ + Sbjct: 919 HRIGQKKQVNIYRLVTKASVEEEIVERAKRKLVLDHLVIQRM 960 >gi|290889294|gb|ADD69945.1| chromo-helicase DNA-binding protein [Zonotrichia albicollis] Length = 1808 Score = 90.4 bits (223), Expect = 1e-16, Method: Composition-based stats. Identities = 27/153 (17%), Positives = 56/153 (36%), Gaps = 21/153 (13%) Query: 68 AAPIIVAYHFNSDLARLQKAFP---------QGRTLDK-DPCTIQEWN-EGKIPL-LFAH 115 +++ L L + G + + +N EG Sbjct: 801 GNRVLIFSQMVRMLDILAEYLKYRQFPFQRLDGSIKGELRKQALDHFNAEGSEDFCFLLS 860 Query: 116 PASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNT 175 + G G+NL + +V F W+ + Q R + G K+ V +Y L+ + + Sbjct: 861 TRAGGLGINL-ASADTVVIFDSDWNPQNDLQAQAR-----AHRIGQKKQVNIYRLVTKGS 914 Query: 176 IDELVLQRLRTKSTIQDLL---LNALKKETIHV 205 ++E +L+R + K + L+ ++ K +H Sbjct: 915 VEEDILERAKKKMVLDHLVIQRMDTTGKTVLHT 947 >gi|195144322|ref|XP_002013145.1| GL23967 [Drosophila persimilis] gi|194102088|gb|EDW24131.1| GL23967 [Drosophila persimilis] Length = 1060 Score = 90.4 bits (223), Expect = 1e-16, Method: Composition-based stats. Identities = 30/162 (18%), Positives = 64/162 (39%), Gaps = 22/162 (13%) Query: 52 HDEKIKALEVIIEKA----NAAPIIVAYHFNSDLARLQKAFPQGRT----------LDKD 97 K+ + I++ + N I+ + S L L+ + + Sbjct: 887 PSTKMLKVMEILKSSILKDNNDKAIIVSQWTSVLEILRDHLENDKLSTLSLNGSIPVKNR 946 Query: 98 PCTIQEWNE--GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTR 155 + ++N+ + +L + G GLNL G N L+ L W+ + Q +RI Sbjct: 947 QEIVNQFNDQHNQKRILLLSLTAGGVGLNL-VGANHLLLLDLHWNPQLEAQAQDRI---- 1001 Query: 156 QRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + G K+ V +Y + +T+++ +L + K + + +L Sbjct: 1002 -YRVGQKKDVMIYKFVCLDTVEQRILALQQHKLELANGVLTG 1042 >gi|307209151|gb|EFN86289.1| DNA excision repair protein ERCC-6 [Harpegnathos saltator] Length = 1005 Score = 90.4 bits (223), Expect = 1e-16, Method: Composition-based stats. Identities = 26/148 (17%), Positives = 50/148 (33%), Gaps = 17/148 (11%) Query: 67 NAAPIIVA---YHFNSDLARLQKA-------FPQGRTLDKDPCTIQEWNE-GKIPLLFAH 115 +++ L L + + + IQ +N + Sbjct: 616 QGHRVLLFTQGIQMIHILESLLQHEGYTYLRLDGSTAMSQRQHVIQMFNNNPSYFVFLLT 675 Query: 116 PASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNT 175 G GLNL G N ++ + W+ Q R + G + V +Y LI T Sbjct: 676 TRVGGLGLNLT-GANRVIIYDPDWNPATDAQARARAW-----RIGQNKQVTIYRLITAGT 729 Query: 176 IDELVLQRLRTKSTIQDLLLNALKKETI 203 I+E + R K + + +L+ ++ + Sbjct: 730 IEEKMYHRQIFKLLLSNKVLDEPRQRRL 757 >gi|302804676|ref|XP_002984090.1| hypothetical protein SELMODRAFT_119222 [Selaginella moellendorffii] gi|300148442|gb|EFJ15102.1| hypothetical protein SELMODRAFT_119222 [Selaginella moellendorffii] Length = 561 Score = 90.4 bits (223), Expect = 1e-16, Method: Composition-based stats. Identities = 27/176 (15%), Positives = 66/176 (37%), Gaps = 24/176 (13%) Query: 35 LANGAVYYDEEKHWKEVHDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQ------- 85 LA+ + D++ + K + L ++ ++ ++ + L L+ Sbjct: 372 LASHSKLRDKD----ALESAKCQLLVKLLPHLQSAGHRPLIFSQWTGMLDILEWVLQVMN 427 Query: 86 ---KAFPQGRTLDKDPCTIQEWNEG-KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDL 141 + + + + ++N+ I + G GLNL +++ Sbjct: 428 LSYRRLDGSTQVCERQSLVDDFNKELDIFAFLLSTRAGGQGLNLTGADTVIIHD------ 481 Query: 142 EEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + ++R R + G ++V VY L+ ++T+DE + + K + D +L Sbjct: 482 VDFNPQMDRQAEDRCHRIGQSKSVTVYRLVTKSTVDENIYGIAQRKLVL-DAVLEG 536 >gi|213401963|ref|XP_002171754.1| ATP-dependent helicase RIS1 [Schizosaccharomyces japonicus yFS275] gi|211999801|gb|EEB05461.1| ATP-dependent helicase RIS1 [Schizosaccharomyces japonicus yFS275] Length = 954 Score = 90.4 bits (223), Expect = 1e-16, Method: Composition-based stats. Identities = 27/155 (17%), Positives = 53/155 (34%), Gaps = 21/155 (13%) Query: 51 VHDEKIKALEVIIEKANAA----PIIVAYHFNSDLAR----LQKAFPQGRTLDKDPCTIQ 102 V KI+ II + +++ F L L + + + Q Sbjct: 771 VTSTKIEKALEIINDIHKKHPSDKVLLFSQFVPFLELFMVPLTQKGLKFIAYNGGMNAAQ 830 Query: 103 EWN-------EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTR 155 + + +L + GLNL +++V +W+ Q I+R Sbjct: 831 RNDALTAFETDPDAIVLLISLKAGNVGLNLTCANHVIVL-DPFWNPFVEDQAIDR----- 884 Query: 156 QRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 + G + + V+ +I TI+E V+ K + Sbjct: 885 AHRIGQTKDITVHRVIVGETIEERVVALQNKKREL 919 >gi|156839953|ref|XP_001643662.1| hypothetical protein Kpol_1040p17 [Vanderwaltozyma polyspora DSM 70294] gi|156114282|gb|EDO15804.1| hypothetical protein Kpol_1040p17 [Vanderwaltozyma polyspora DSM 70294] Length = 797 Score = 90.4 bits (223), Expect = 1e-16, Method: Composition-based stats. Identities = 34/174 (19%), Positives = 67/174 (38%), Gaps = 22/174 (12%) Query: 41 YYDEEKHWKEVHDEKIKALEVIIE---KANAAPIIVAYHFNSDLARLQK----------A 87 Y +EK W + K++ L +++ ++V F L L+K Sbjct: 605 YKLDEKAWA--NSGKVEKLCELLKDIISVKKEKVLVFSLFTQVLDILEKVLSSLNYKFLR 662 Query: 88 FPQGRTLDKDPCTIQEWNEGK-IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 ++ I ++ E IP+ + G G+NL N+++F + Sbjct: 663 LDGSTQVNDRQSLIDKFYEDDTIPIFILSTKAGGFGINLVCANNVIIFD------QSFNP 716 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKK 200 +R R + G + V + LI +++I+E +LQ + K + + KK Sbjct: 717 HDDRQAADRAHRVGQTKEVNITTLITKDSIEEKILQLAKNKLDLDTHVSEDDKK 770 >gi|326426828|gb|EGD72398.1| chromodomain helicase DNA binding protein 1 [Salpingoeca sp. ATCC 50818] Length = 1534 Score = 90.4 bits (223), Expect = 1e-16, Method: Composition-based stats. Identities = 32/178 (17%), Positives = 69/178 (38%), Gaps = 20/178 (11%) Query: 35 LANGAVYYDEEKHWKEVHDEKIKALEVIIEKAN--AAPIIVAYHFNSDLA-----RLQKA 87 L+N V E K+ L+ ++++ + +++ L + K Sbjct: 877 LSNPDVSPTENMRNLLKGSGKLILLDKLLQRLHDKGHRVLIFSQMVLMLDVLATYLMMKG 936 Query: 88 FPQGRT-----LDKDPCTIQEWNE-GKIPL-LFAHPASCGHGLNLQYGGNILVFFSLWWD 140 +P R ++ I +N G + G G+NL + ++ F W+ Sbjct: 937 YPFQRLDGNIPNERRKQAIDHFNAPGSADFCFILSTRAGGLGVNL-ATADTVIIFDSDWN 995 Query: 141 LEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNAL 198 + Q R + G R V +Y +++NT++E +L+R + K + L++ + Sbjct: 996 PQNDLQAQAR-----AHRIGQTRQVNIYRFVSKNTVEEDILERAKKKMVLDHLVIQRM 1048 >gi|325185489|emb|CCA19972.1| PREDICTED: similar to SWI/SNFrelated matrixassociated actindependent regulator of chromatin a2 isoform b isoform 10 putative [Albugo laibachii Nc14] Length = 1295 Score = 90.4 bits (223), Expect = 1e-16, Method: Composition-based stats. Identities = 40/223 (17%), Positives = 80/223 (35%), Gaps = 32/223 (14%) Query: 3 QYHKFQRELYCDLQGENIEAFNSAS-----KTVKCLQL---ANGAVYYDEEKHWKEVH-- 52 Y + Q+ L+ E E + A + +QL N + + + + Sbjct: 738 LYRRIQQGGAILLEQEGNEKSSKAKYTFKGLSNVLMQLRKVCNHPYLFQPQGYPIDFDLV 797 Query: 53 --DEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQ-----KAFPQGRTLDKDPCTIQE 103 K + L+ ++ K A +++ + L+ ++F R +E Sbjct: 798 RSSGKFELLDRMLPKLKAAGHRVLMFSQMTQLMHILEDYFQYRSFTYLRLDGSTSADERE 857 Query: 104 -----WNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 +N P + + G GLNL + ++ F W+ Q R Sbjct: 858 QRMFMFNASDSPHFIFLLSTRAGGLGLNL-ATADTVIIFDSDWNPAMDAQA-----QDRA 911 Query: 157 RQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 + G K V V+ L+ + ++E +L R K + +L++ A K Sbjct: 912 HRIGQKNEVRVFRLVTNSPVEEKILSRATNKLNMNNLVVEAGK 954 >gi|134083904|emb|CAK48808.1| unnamed protein product [Aspergillus niger] Length = 875 Score = 90.4 bits (223), Expect = 1e-16, Method: Composition-based stats. Identities = 32/162 (19%), Positives = 63/162 (38%), Gaps = 23/162 (14%) Query: 52 HDEKIKALEVIIEK---ANAAPIIVAYHFNSDLARLQKAF-----------PQGRTLDKD 97 KI+AL I+ A ++ + S L ++ + ++ +D Sbjct: 700 PSSKIEALIKILTAKGQAQGTKTVIFSQWTSFLDLIEPHLFRHGIGFARIDGKMSSISRD 759 Query: 98 PCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 T++ + +L A + C GLNL N + WW Q ++R+ Sbjct: 760 NSTLRFSTDPSCTVLLASLSVCSVGLNL-VAANQAILCDSWWAPAIEDQAVDRV-----Y 813 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 + G R V+ L+ +++I++ VL K + +L A + Sbjct: 814 RLGQTRETTVWRLVMEDSIEDRVLAIQENKRKL---MLEAFR 852 >gi|323447794|gb|EGB03704.1| hypothetical protein AURANDRAFT_5295 [Aureococcus anophagefferens] Length = 154 Score = 90.4 bits (223), Expect = 1e-16, Method: Composition-based stats. Identities = 23/142 (16%), Positives = 50/142 (35%), Gaps = 17/142 (11%) Query: 65 KANAAPIIVAYHFNSDLARLQK----------AFPQGRTLDKDPCTIQEWN-EGKIPLLF 113 ++ ++V F L + + A I +N + Sbjct: 19 RSEGRKVLVFSQFVRVLGLVAELCAHRGYDAEALTGATPAADRQRAIDRFNASPDAFVFL 78 Query: 114 AHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQ 173 + G G+NL + +V + W+ + Q + R + G R V VY L+A+ Sbjct: 79 LSTRAGGVGINL-CAADTVVIYDSDWNPQNDVQAMARC-----HRLGQTRDVAVYRLVAR 132 Query: 174 NTIDELVLQRLRTKSTIQDLLL 195 + + +L+ K ++ ++ Sbjct: 133 KSFEGHMLEAAARKLGLERAVM 154 >gi|126272865|ref|XP_001366076.1| PREDICTED: similar to excision repair protein [Monodelphis domestica] Length = 1492 Score = 90.4 bits (223), Expect = 1e-16, Method: Composition-based stats. Identities = 35/172 (20%), Positives = 63/172 (36%), Gaps = 21/172 (12%) Query: 43 DEEKHWKEVHDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQK----------AFPQ 90 D+ +WK K+ +E +++ +++ L L+ Sbjct: 825 DQFGYWKR--SGKMIVVESLLKIWHKQGHRVLLFSQSRQMLHLLEVFLRARDYSYLKMDG 882 Query: 91 GRTLDKDPCTIQEWNEG-KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIE 149 T+ I +NE I + G G+NL G N ++ + W+ Q E Sbjct: 883 TTTIASRQPLITRYNEDTSIFVFLLTTRVGGIGVNLT-GANRVIIYDPDWNPSTDTQARE 941 Query: 150 RIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 R + G K+ V VY L+ TI+E + R K + + +L K+ Sbjct: 942 RAW-----RIGQKKQVTVYRLLTAGTIEEKIYHRQIFKQFLTNRILKDPKQR 988 >gi|125775660|ref|XP_001359021.1| GA15429 [Drosophila pseudoobscura pseudoobscura] gi|54638762|gb|EAL28164.1| GA15429 [Drosophila pseudoobscura pseudoobscura] Length = 1058 Score = 90.4 bits (223), Expect = 1e-16, Method: Composition-based stats. Identities = 30/162 (18%), Positives = 64/162 (39%), Gaps = 22/162 (13%) Query: 52 HDEKIKALEVIIEKA----NAAPIIVAYHFNSDLARLQKAFPQGRT----------LDKD 97 K+ + I++ + N I+ + S L L+ + + Sbjct: 885 PSTKMLKVMEILKSSILKDNNDKAIIVSQWTSVLEILRDHLENDKLSTLSLNGSIPVKNR 944 Query: 98 PCTIQEWNE--GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTR 155 + ++N+ + +L + G GLNL G N L+ L W+ + Q +RI Sbjct: 945 QEIVNQFNDQHNQKRILLLSLTAGGVGLNL-VGANHLLLLDLHWNPQLEAQAQDRI---- 999 Query: 156 QRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + G K+ V +Y + +T+++ +L + K + + +L Sbjct: 1000 -YRVGQKKDVMIYKFVCLDTVEQRILALQQHKLELANGVLTG 1040 >gi|259147500|emb|CAY80752.1| Rad26p [Saccharomyces cerevisiae EC1118] Length = 1085 Score = 90.4 bits (223), Expect = 1e-16, Method: Composition-based stats. Identities = 32/147 (21%), Positives = 54/147 (36%), Gaps = 18/147 (12%) Query: 56 IKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRT-LDKDPCTIQEWNEGKIPLLFA 114 + LE I + DL+ L G T + + +N + Sbjct: 680 LDILEEFISTKD-----------PDLSHLNYLRMDGTTNIKGRQSLVDRFNNESFDVFLL 728 Query: 115 HPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQN 174 G G+NL G N ++ F W+ Q ER + G KR V +Y L+ Sbjct: 729 TTRVGGLGVNLT-GANRIIIFDPDWNPSTDMQARERAW-----RIGQKREVSIYRLMVGG 782 Query: 175 TIDELVLQRLRTKSTIQDLLLNALKKE 201 +I+E + R K + + +L K++ Sbjct: 783 SIEEKIYHRQIFKQFLTNRILTDPKQK 809 >gi|73952006|ref|XP_546008.2| PREDICTED: similar to chromodomain helicase DNA binding protein 1 isoform 1 [Canis familiaris] Length = 1799 Score = 90.4 bits (223), Expect = 1e-16, Method: Composition-based stats. Identities = 27/153 (17%), Positives = 56/153 (36%), Gaps = 21/153 (13%) Query: 68 AAPIIVAYHFNSDLARLQKAFP---------QGRTLDK-DPCTIQEWN-EGKIPL-LFAH 115 +++ L L + G + + +N EG Sbjct: 803 GNRVLIFSQMVRMLDILAEYLKYRQFPFQRLDGSIKGELRKQALDHFNAEGSEDFCFLLS 862 Query: 116 PASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNT 175 + G G+NL + +V F W+ + Q R + G K+ V +Y L+ + + Sbjct: 863 TRAGGLGINL-ASADTVVIFDSDWNPQNDLQAQAR-----AHRIGQKKQVNIYRLVTKGS 916 Query: 176 IDELVLQRLRTKSTIQDLL---LNALKKETIHV 205 ++E +L+R + K + L+ ++ K +H Sbjct: 917 VEEDILERAKKKMVLDHLVIQRMDTTGKTVLHT 949 >gi|41053461|ref|NP_956607.1| chromodomain-helicase-DNA-binding protein 1-like [Danio rerio] gi|82209540|sp|Q7ZU90|CHD1L_DANRE RecName: Full=Chromodomain-helicase-DNA-binding protein 1-like gi|29791985|gb|AAH50498.1| Chromodomain helicase DNA binding protein 1-like [Danio rerio] Length = 1026 Score = 90.4 bits (223), Expect = 1e-16, Method: Composition-based stats. Identities = 27/166 (16%), Positives = 63/166 (37%), Gaps = 19/166 (11%) Query: 43 DEEKHWKEVHDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAFP---------QG 91 + +H E K+ L+ ++ + +++ L LQ G Sbjct: 326 EMGEHLVE-ASGKLSLLDSMLAYLQEGGHHVLLFSQMTRMLDILQDYLEYRGYSYERLDG 384 Query: 92 RTLDKDPC-TIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 ++ I+ ++ + + + G G+NL + ++F ++ + Q R Sbjct: 385 SVRGEERNLAIKNFSTKDVFIFLLSTKAGGVGMNLT-AADTVIFVDGDFNPQNDLQAAAR 443 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + G R V V L+ ++TI+E++ R +K + D ++ Sbjct: 444 -----AHRIGQTRPVKVIRLLGRDTIEEIIYSRAVSKLRLTDTVIE 484 >gi|71029212|ref|XP_764249.1| DNA-dependent helicase [Theileria parva strain Muguga] gi|68351203|gb|EAN31966.1| DNA-dependent helicase, putative [Theileria parva] Length = 2026 Score = 90.4 bits (223), Expect = 1e-16, Method: Composition-based stats. Identities = 31/169 (18%), Positives = 57/169 (33%), Gaps = 28/169 (16%) Query: 39 AVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLAR-----LQKAFPQGRT 93 A E D K+ +++ F L + + + R Sbjct: 1007 AASGQNNGVSVEAEDSKVYM----------HKVLIFTQFQLVLDELETYCINRGWKYMRL 1056 Query: 94 LDKDPC-----TIQEWNEGK--IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 I+E+N + + G G+NL N +V + W+ Q Sbjct: 1057 DGSTNKLIRELDIREFNSNNSNYFVYLISTRAGGLGINLT-AANHVVLYDEDWNPFIDLQ 1115 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 I+R + G KR V ++ LI++ T++E + K + L+L Sbjct: 1116 AIDR-----AHRIGQKRNVHIWKLISEWTVEERMALIREKKLQLDKLIL 1159 >gi|134083941|emb|CAK43037.1| unnamed protein product [Aspergillus niger] Length = 1418 Score = 90.4 bits (223), Expect = 1e-16, Method: Composition-based stats. Identities = 32/159 (20%), Positives = 62/159 (38%), Gaps = 20/159 (12%) Query: 55 KIKALEVIIE--KANAAPIIVAYHFNSD---------LARLQKAFPQGRTLDKDPCTI-Q 102 K + L+ I+ +A +++ + L L+ G T D + + Sbjct: 864 KFELLDRILPKFRATGHRVLMFFQMTQIMNIMEDFLRLRGLKYLRLDGSTKSDDRSDLLK 923 Query: 103 EWNEGKIPLL--FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 +N + G GLNLQ + ++ F W+ + Q R + G Sbjct: 924 LFNAPDSEYFCFLLSTRAGGLGLNLQ-SADTVIIFDSDWNPHQDLQA-----QDRAHRIG 977 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 K V + LI+ N+++E +L+R + K + ++ A K Sbjct: 978 QKNEVRILRLISSNSVEEKILERAQFKLDMDGKVIQAGK 1016 >gi|21392184|gb|AAM48446.1| RE70645p [Drosophila melanogaster] gi|54650558|gb|AAV36858.1| RE74565p [Drosophila melanogaster] Length = 835 Score = 90.4 bits (223), Expect = 1e-16, Method: Composition-based stats. Identities = 34/166 (20%), Positives = 62/166 (37%), Gaps = 22/166 (13%) Query: 50 EVHDEKIKALEVIIE----KANAAPIIVAYHFNSDLARLQKAFPQGRT----------LD 95 KI + I++ K++ IV + S L L+ + + Sbjct: 660 HRPSSKINMVIQILKTSILKSSDDKAIVVSQWTSVLDILRDHLSKDGVATLSLNGTIPVK 719 Query: 96 KDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGV 153 + E+N+ +L + G GLNL G N L+ L W + Q +RI Sbjct: 720 NRQDIVNEFNDRNNQKRVLLLSLTAGGVGLNL-IGANHLLLLDLHWSPQLEAQAQDRI-- 776 Query: 154 TRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 + G K+ V +Y + +T+++ + K + D +L K Sbjct: 777 ---YRVGQKKNVIIYKFMCVDTVEQRIKGLQDKKLDLADGVLTGAK 819 >gi|321470001|gb|EFX80979.1| hypothetical protein DAPPUDRAFT_21484 [Daphnia pulex] Length = 665 Score = 90.4 bits (223), Expect = 1e-16, Method: Composition-based stats. Identities = 33/192 (17%), Positives = 69/192 (35%), Gaps = 48/192 (25%) Query: 55 KIKALEVIIEKA--NAAPIIVAYHFNSDLARLQK----------AFPQGRTLDKDPCTIQ 102 K++ L+ ++ + +++ L L+ +D+ ++ Sbjct: 35 KLQTLDNLLRQLKVGKHRVLIFTQMTRMLDVLESFLNHHGHIYLRLDGTTRVDQRQVLME 94 Query: 103 EWNEGK-IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGF 161 +N + I S G G+NL G + ++F+ W+ Q +R + G Sbjct: 95 RFNADRRIFCFILSTRSGGVGVNLT-GADTVIFYDSDWNPTMDAQAQDRC-----HRIGQ 148 Query: 162 KRAVFVY----------------------YLIAQNTIDELVLQRLRTKSTIQDLLLNA-- 197 R V +Y LI++ T++E +L++ K + D+ + Sbjct: 149 TRDVHIYRRVHKFYIAYPLFIDSLLFHFSRLISERTVEENILKKANQKRLLGDIAIEGGN 208 Query: 198 -----LKKETIH 204 KK+TIH Sbjct: 209 FTAATFKKQTIH 220 >gi|320582108|gb|EFW96326.1| chromatin remodelling complex ATPase chain ISW1 [Pichia angusta DL-1] Length = 1033 Score = 90.4 bits (223), Expect = 1e-16, Method: Composition-based stats. Identities = 41/234 (17%), Positives = 88/234 (37%), Gaps = 43/234 (18%) Query: 6 KFQRELYCDLQGENIEAFNSAS--------KTVKCLQLAN-------------GAVYYDE 44 + Q++ Y L +I+A N A+ +QL G Y + Sbjct: 383 EMQKKWYQKLLERDIDAVNGANGKRESKTRLLNIVMQLRKCCNHPYLFEGAEPGPPYTTD 442 Query: 45 EKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQ---------KAFPQGRT 93 E + +K+K L+ ++++ + +++ + L L+ G+T Sbjct: 443 EHLI--YNSQKMKVLDKMLKRFKEQGSRVLIFSQMSRMLDILEDYCSFRGFEYCRIDGQT 500 Query: 94 LDKDP-CTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 D I E++ + + G G+NL +I+ + W+ + Q ++R Sbjct: 501 DHVDRIRAIDEYSAPDSKKFVFLLTTRAGGLGINLT-SADIVFLYDSDWNPQADLQAMDR 559 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIH 204 + G + V V+ + Q I+E VL+R K + L++ ++ + Sbjct: 560 -----AHRIGQTKQVKVFRFVTQKAIEEKVLERASQKLRLDQLVIQQGRQMNVQ 608 >gi|302753248|ref|XP_002960048.1| hypothetical protein SELMODRAFT_139206 [Selaginella moellendorffii] gi|300170987|gb|EFJ37587.1| hypothetical protein SELMODRAFT_139206 [Selaginella moellendorffii] Length = 551 Score = 90.4 bits (223), Expect = 1e-16, Method: Composition-based stats. Identities = 27/176 (15%), Positives = 66/176 (37%), Gaps = 24/176 (13%) Query: 35 LANGAVYYDEEKHWKEVHDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQ------- 85 LA+ + D++ + K + L ++ ++ ++ + L L+ Sbjct: 362 LASHSKLRDKD----ALESAKCQLLVKLLPHLQSAGHRPLIFSQWTGMLDILEWVLQVMN 417 Query: 86 ---KAFPQGRTLDKDPCTIQEWNEG-KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDL 141 + + + + ++N+ I + G GLNL +++ Sbjct: 418 LSYRRLDGSTQVCERQSLVDDFNKELDIFAFLLSTRAGGQGLNLTGADTVIIHD------ 471 Query: 142 EEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + ++R R + G ++V VY L+ ++T+DE + + K + D +L Sbjct: 472 VDFNPQMDRQAEDRCHRIGQSKSVTVYRLVTKSTVDENIFGIAQRKLVL-DAVLEG 526 >gi|301103963|ref|XP_002901067.1| transcriptional regulator ATRX [Phytophthora infestans T30-4] gi|262101405|gb|EEY59457.1| transcriptional regulator ATRX [Phytophthora infestans T30-4] Length = 1272 Score = 90.4 bits (223), Expect = 1e-16, Method: Composition-based stats. Identities = 34/176 (19%), Positives = 66/176 (37%), Gaps = 16/176 (9%) Query: 24 NSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLAR 83 ++ K + ++L + + + + ++I K N Y R Sbjct: 651 EASGKMMILMELLSACQDVGDRVIIFSQSIPTLDTIGLMISKHNK------YQRRHS-KR 703 Query: 84 LQKAFPQGRTLDKDP-CTIQEWN--EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWD 140 L G T +D I ++N E I L+ + G G+NL GN ++ F + W+ Sbjct: 704 LNYLRIDGSTSQQDRFRQIAQFNDLEEDIDLIMISTKAGGEGINL-CAGNRIIIFDVCWN 762 Query: 141 LEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 Q + R + G + VFVY + T+++ V K + +++ Sbjct: 763 PCNDSQSM-----CRSYRFGQTKPVFVYRFVTMGTMEKKVYDLQIRKEGVAKRIVD 813 >gi|550429|emb|CAA57290.1| RAD26 [Saccharomyces cerevisiae] Length = 1085 Score = 90.4 bits (223), Expect = 1e-16, Method: Composition-based stats. Identities = 32/147 (21%), Positives = 54/147 (36%), Gaps = 18/147 (12%) Query: 56 IKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRT-LDKDPCTIQEWNEGKIPLLFA 114 + LE I + DL+ L G T + + +N + Sbjct: 680 LDILEEFISTKD-----------PDLSHLNYLRMDGTTNIKGRQSLVDRFNNESFDVFLL 728 Query: 115 HPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQN 174 G G+NL G N ++ F W+ Q ER + G KR V +Y L+ Sbjct: 729 TTRVGGLGVNLT-GANRIIIFDPDWNPSTDMQARERAW-----RIGQKREVSIYRLMVGG 782 Query: 175 TIDELVLQRLRTKSTIQDLLLNALKKE 201 +I+E + R K + + +L K++ Sbjct: 783 SIEEKIYHRQIFKQFLTNRILTDPKQK 809 >gi|156846474|ref|XP_001646124.1| hypothetical protein Kpol_1039p15 [Vanderwaltozyma polyspora DSM 70294] gi|156116797|gb|EDO18266.1| hypothetical protein Kpol_1039p15 [Vanderwaltozyma polyspora DSM 70294] Length = 1385 Score = 90.4 bits (223), Expect = 1e-16, Method: Composition-based stats. Identities = 42/227 (18%), Positives = 79/227 (34%), Gaps = 35/227 (15%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASK--TVKCLQL---ANGAVYYDEEKHWKEVH---- 52 + Y + + A K K +QL N +DE + Sbjct: 759 QLYQQMLNHNALFVGAGTEGATKGGIKGLNNKIMQLRKICNHPFVFDEVEGVVNPTRGNS 818 Query: 53 ------DEKIKALEVIIEK--ANAAPIIVAYH------FNSDLAR---LQKAFPQGRTLD 95 K + L+ ++ K A+ +++ + D R L+ G T Sbjct: 819 TLLYRVSGKFELLDRVLPKFKASGHRVLIFFQMTQVMDIMEDFLRMRDLKYMRLDGATKA 878 Query: 96 KDPCT-IQEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIG 152 +D ++ +N + G GLNLQ + ++ F W+ + Q Sbjct: 879 EDRTDMLKVFNAPNSDYFCFLLSTRAGGLGLNLQT-ADTVIIFDTDWNPHQDLQA----- 932 Query: 153 VTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 R + G K V + LI ++++E++L+R K I ++ A K Sbjct: 933 QDRAHRIGQKNEVRILRLITTDSVEEVILERAMQKLDIDGKVIQAGK 979 >gi|328862601|gb|EGG11702.1| hypothetical protein MELLADRAFT_115234 [Melampsora larici-populina 98AG31] Length = 1138 Score = 90.4 bits (223), Expect = 1e-16, Method: Composition-based stats. Identities = 41/232 (17%), Positives = 88/232 (37%), Gaps = 39/232 (16%) Query: 6 KFQRELYCDLQGENIEAFNSAS--------KTVKCLQL---ANGAVYYD--------EEK 46 + QR+ Y + ++I+A N + +QL N +D Sbjct: 448 EMQRKWYKMILEKDIDAVNGVTGKKEGKTRLMNVVMQLRKCCNHPYLFDGAEPGPPFTTD 507 Query: 47 HWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQ---------KAFPQGRTLD 95 + K+ L+ +++ A + +++ + L L+ G T Sbjct: 508 EHLVFNSGKMIILDKLLKAMKAKGSRVLIFSQMSRVLDILEDYCLFREYEYCRIDGSTQH 567 Query: 96 KDP-CTIQEWNE--GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIG 152 ++ I E+N+ + + G G+NL +I+V F W+ + Q ++R Sbjct: 568 EERIGAIDEYNKEGSSKFIFLLTTRAGGLGINLTT-ADIVVLFDSDWNPQADLQAMDR-- 624 Query: 153 VTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIH 204 + G K+ V+V+ + +N ++E VL+R K + L++ + Sbjct: 625 ---AHRIGQKKQVYVFRFVTENAVEEKVLERAAQKLRLDQLVIQQGRANVAQ 673 >gi|292606963|gb|ADE34162.1| chromodomain helicase DNA-binding protein 4 [Schmidtea mediterranea] Length = 1868 Score = 90.4 bits (223), Expect = 1e-16, Method: Composition-based stats. Identities = 24/153 (15%), Positives = 53/153 (34%), Gaps = 20/153 (13%) Query: 52 HDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQ----------KAFPQGRTLDKDPC 99 K++ L ++ K +++ L L+ + T + Sbjct: 1056 ASGKLELLYKMLPKLKTGGHRVLIFSQMTRLLDILEDFMDYMGYKFERIDGAVTGQQRQD 1115 Query: 100 TIQEWNEGKI--PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 +I +N + + G G+NL + ++ + W+ Q +R Sbjct: 1116 SIDRFNAPDSVSFVFLLSTRAGGLGINL-ATADTVIIYDSDWNPHNDIQA-----FSRAH 1169 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 + G V +Y + +NT++E V Q + K + Sbjct: 1170 RIGQSNKVMIYRFVTRNTVEERVTQVAKKKMML 1202 >gi|256083283|ref|XP_002577876.1| helicase [Schistosoma mansoni] gi|238663214|emb|CAZ34114.1| helicase, putative [Schistosoma mansoni] Length = 1436 Score = 90.4 bits (223), Expect = 1e-16, Method: Composition-based stats. Identities = 34/167 (20%), Positives = 64/167 (38%), Gaps = 20/167 (11%) Query: 45 EKHWKEVHDEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQKAFP---------QGRT 93 E K + L+ I+ K +++ S + +Q F G T Sbjct: 903 EGKILYRSSGKFELLDRILPKLKCCGHRVLIFCQMTSLMTIMQDYFDYRNFRYLRLDGTT 962 Query: 94 LDKDP-CTIQEWNE--GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 +D + ++N+ I + + G GLNLQ + ++ F W+ + Q Sbjct: 963 RSEDRGELLVKFNDTSEDIFIFLLSTRAGGLGLNLQ-AADTVIIFDSDWNPHQDLQA--- 1018 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 R + G + V V LI+ N+++E +L R K + ++ A Sbjct: 1019 --QDRAHRIGQQNEVRVLRLISINSVEEKILAAARFKLDVDQKVIQA 1063 >gi|303280531|ref|XP_003059558.1| predicted protein [Micromonas pusilla CCMP1545] gi|226459394|gb|EEH56690.1| predicted protein [Micromonas pusilla CCMP1545] Length = 553 Score = 90.4 bits (223), Expect = 1e-16, Method: Composition-based stats. Identities = 37/185 (20%), Positives = 68/185 (36%), Gaps = 24/185 (12%) Query: 6 KFQRELYCDLQGENIEAFNSASKTVKCLQLA--NGAVYYDEEKHWKEVHDEKIKALEVII 63 + Q+ + + +G + A+ +L +G+ E + A V+ Sbjct: 386 RLQKNVPPEYEGGIDGSGKLATLRALLRELTKMDGSRDGGERVVVVSGFSAALDAAAVVC 445 Query: 64 EKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKI-PLLFAHPASCGHG 122 P RL P + ++++N G ++ + G G Sbjct: 446 RDL-GLPA----------DRLDGRVP----PNARSGLVRDFNRGSGGRVMLLSCVAGGAG 490 Query: 123 LNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQ 182 LNL G + L+ F W+ +Q + R+ + G R V +Y L+A T++E V Q Sbjct: 491 LNL-VGASRLILFDTSWNPAHDRQAMARVW-----RDGQTRPVTIYRLLAAGTVEEKVFQ 544 Query: 183 RLRTK 187 R K Sbjct: 545 RQLMK 549 >gi|207340928|gb|EDZ69127.1| YOR290Cp-like protein [Saccharomyces cerevisiae AWRI1631] Length = 824 Score = 90.4 bits (223), Expect = 1e-16, Method: Composition-based stats. Identities = 32/159 (20%), Positives = 62/159 (38%), Gaps = 20/159 (12%) Query: 55 KIKALEVIIEK--ANAAPIIVAYHFNSDLAR---------LQKAFPQGRTL-DKDPCTIQ 102 K + L+ I+ K A +++ + + ++ G T D+ ++ Sbjct: 209 KFELLDRILPKLKATGHRVLIFFQMTQIMDIMEDFLRYINIKYLRLDGHTKSDERSELLR 268 Query: 103 EWNEGKIPL--LFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 +N + G GLNLQ + ++ F W+ + Q R + G Sbjct: 269 LFNAPDSEYLCFILSTRAGGLGLNLQT-ADTVIIFDTDWNPHQDLQA-----QDRAHRIG 322 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 K V + LI N+++E++L+R K I ++ A K Sbjct: 323 QKNEVRILRLITTNSVEEVILERAYKKLDIDGKVIQAGK 361 >gi|151945105|gb|EDN63356.1| DNA dependent ATPase [Saccharomyces cerevisiae YJM789] Length = 1085 Score = 90.4 bits (223), Expect = 1e-16, Method: Composition-based stats. Identities = 32/147 (21%), Positives = 54/147 (36%), Gaps = 18/147 (12%) Query: 56 IKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRT-LDKDPCTIQEWNEGKIPLLFA 114 + LE I + DL+ L G T + + +N + Sbjct: 680 LDILEEFISTKD-----------PDLSHLNYLRMDGTTNIKGRQSLVDRFNNESFDVFLL 728 Query: 115 HPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQN 174 G G+NL G N ++ F W+ Q ER + G KR V +Y L+ Sbjct: 729 TTRVGGLGVNLT-GANRIIIFDPDWNPSTDMQARERAW-----RIGQKREVSIYRLMVGG 782 Query: 175 TIDELVLQRLRTKSTIQDLLLNALKKE 201 +I+E + R K + + +L K++ Sbjct: 783 SIEEKIYHRQIFKQFLTNRILTDPKQK 809 >gi|6322495|ref|NP_012569.1| Rad26p [Saccharomyces cerevisiae S288c] gi|730465|sp|P40352|RAD26_YEAST RecName: Full=DNA repair and recombination protein RAD26; AltName: Full=ATP-dependent helicase RAD26 gi|506419|gb|AAA34655.1| gtA1085 [Saccharomyces cerevisiae] gi|1015683|emb|CAA89562.1| RAD26 [Saccharomyces cerevisiae] gi|285812926|tpg|DAA08824.1| TPA: Rad26p [Saccharomyces cerevisiae S288c] Length = 1085 Score = 90.4 bits (223), Expect = 1e-16, Method: Composition-based stats. Identities = 32/147 (21%), Positives = 54/147 (36%), Gaps = 18/147 (12%) Query: 56 IKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRT-LDKDPCTIQEWNEGKIPLLFA 114 + LE I + DL+ L G T + + +N + Sbjct: 680 LDILEEFISTKD-----------PDLSHLNYLRMDGTTNIKGRQSLVDRFNNESFDVFLL 728 Query: 115 HPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQN 174 G G+NL G N ++ F W+ Q ER + G KR V +Y L+ Sbjct: 729 TTRVGGLGVNLT-GANRIIIFDPDWNPSTDMQARERAW-----RIGQKREVSIYRLMVGG 782 Query: 175 TIDELVLQRLRTKSTIQDLLLNALKKE 201 +I+E + R K + + +L K++ Sbjct: 783 SIEEKIYHRQIFKQFLTNRILTDPKQK 809 >gi|320034578|gb|EFW16522.1| SNF2-family ATP-dependent chromatin remodeling factor snf21 [Coccidioides posadasii str. Silveira] Length = 1410 Score = 90.4 bits (223), Expect = 1e-16, Method: Composition-based stats. Identities = 40/225 (17%), Positives = 84/225 (37%), Gaps = 33/225 (14%) Query: 2 KQYHKFQ--RELYCDLQGENIEAFNSAS-KTVKCLQLANGAV---YYDEEKHWKEVHDE- 54 K Y + ++ S ++ +L N +EE + + ++ Sbjct: 788 KLYKQLVTHNKMVVSDGKGGKTGMRGLSNMLMQLRKLCNHPFVFESVEEEMNPGKGTNDL 847 Query: 55 ------KIKALEVIIEK--ANAAPIIVAYH------FNSDLAR---LQKAFPQGRTL-DK 96 K + L+ I+ K A+ +++ + D R L+ G T D Sbjct: 848 IWRTAGKFELLDRILPKFKASGHRVLMFFQMTQIMNIMEDFLRFRGLKYLRLDGSTKSDD 907 Query: 97 DPCTIQEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 ++ +N+ + + G GLNLQ + ++ + W+ + Q Sbjct: 908 RSELLRRFNDPGSEYFCFLLSTRAGGLGLNLQT-ADTVIIYDSDWNPHQDLQA-----QD 961 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 R + G K V + LI+ N+++E +L+R + K + ++ A K Sbjct: 962 RAHRIGQKNEVRILRLISSNSVEERILERAQFKLDMDGKVIQAGK 1006 >gi|119181968|ref|XP_001242147.1| hypothetical protein CIMG_06043 [Coccidioides immitis RS] Length = 1410 Score = 90.4 bits (223), Expect = 1e-16, Method: Composition-based stats. Identities = 40/225 (17%), Positives = 84/225 (37%), Gaps = 33/225 (14%) Query: 2 KQYHKFQ--RELYCDLQGENIEAFNSAS-KTVKCLQLANGAV---YYDEEKHWKEVHDE- 54 K Y + ++ S ++ +L N +EE + + ++ Sbjct: 788 KLYKQLVTHNKMVVSDGKGGKTGMRGLSNMLMQLRKLCNHPFVFESVEEEMNPGKGTNDL 847 Query: 55 ------KIKALEVIIEK--ANAAPIIVAYH------FNSDLAR---LQKAFPQGRTL-DK 96 K + L+ I+ K A+ +++ + D R L+ G T D Sbjct: 848 IWRTAGKFELLDRILPKFKASGHRVLMFFQMTQIMNIMEDFLRFRGLKYLRLDGSTKSDD 907 Query: 97 DPCTIQEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 ++ +N+ + + G GLNLQ + ++ + W+ + Q Sbjct: 908 RSELLRRFNDPGSEYFCFLLSTRAGGLGLNLQT-ADTVIIYDSDWNPHQDLQA-----QD 961 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 R + G K V + LI+ N+++E +L+R + K + ++ A K Sbjct: 962 RAHRIGQKNEVRILRLISSNSVEERILERAQFKLDMDGKVIQAGK 1006 >gi|197261472|ref|YP_002154287.1| putative helicase [Pseudomonas phage LMA2] gi|197244562|emb|CAR31296.1| putative helicase [Pseudomonas phage LMA2] Length = 538 Score = 90.4 bits (223), Expect = 2e-16, Method: Composition-based stats. Identities = 39/215 (18%), Positives = 86/215 (40%), Gaps = 24/215 (11%) Query: 2 KQYHKFQRELYCDLQGEN---IEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDE---- 54 K Y + + + + LQ E+ +F++A+ K Q+A+G + E D Sbjct: 319 KVYQRVEEDYHFVLQNEDFMLDVSFDAAAARSKLKQVASGYINVYGEPVILPPEDNPRFA 378 Query: 55 -KIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQ---------GRTLD-KDPCTIQE 103 LE ++E+ II+ ++ ++ G T + + I + Sbjct: 379 VFTDLLEGLLEEDPERSIIIWAMRIQEIGQIAAYLETQGISFGTYYGDTKEAEREKLIDD 438 Query: 104 WNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKR 163 + ++ + +PA+ G G+ L ++ ++++ D E Q R + G Sbjct: 439 FQAKRVQVFLGNPAAAGIGITLT-AADVAIYYTTDEDNELRMQ-----SEDRNHRIGTVN 492 Query: 164 AVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNAL 198 +V + LI ++IDE + L K + +++ + Sbjct: 493 SVLYFDLICLDSIDEKIQVSLEWKRNLASYVVDGV 527 >gi|82914943|ref|XP_728905.1| hypothetical protein [Plasmodium yoelii yoelii str. 17XNL] gi|23485550|gb|EAA20470.1| DOMINO B-related [Plasmodium yoelii yoelii] Length = 1732 Score = 90.4 bits (223), Expect = 2e-16, Method: Composition-based stats. Identities = 26/163 (15%), Positives = 64/163 (39%), Gaps = 19/163 (11%) Query: 47 HWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQK----------AFPQGRTL 94 + K+ ALE ++ K ++ F L L+ + Sbjct: 1398 KDISLGSGKLFALEKLLSKCKKEGNKCLLFTQFIKMLDILEIFLNHLNYSFIRLDGSTKV 1457 Query: 95 DKDPCTIQEWNEGK-IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGV 153 ++ + ++N K + + S G+NL N+++F+ W+ +Q ++R Sbjct: 1458 EQRQKIVTKFNNDKSYFIFISSTRSGSIGINLT-AANVVIFYDTDWNPSIDKQAMDRC-- 1514 Query: 154 TRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + G + V V+ + + T++E + ++ K + ++ +N Sbjct: 1515 ---HRIGQTKDVHVFRFVCEYTVEENIWKKQLQKRKLDNICIN 1554 >gi|317036939|ref|XP_001398370.2| chromatin structure-remodeling complex subunit snf2 [Aspergillus niger CBS 513.88] Length = 1422 Score = 90.4 bits (223), Expect = 2e-16, Method: Composition-based stats. Identities = 32/159 (20%), Positives = 62/159 (38%), Gaps = 20/159 (12%) Query: 55 KIKALEVIIE--KANAAPIIVAYHFNSD---------LARLQKAFPQGRTLDKDPCTI-Q 102 K + L+ I+ +A +++ + L L+ G T D + + Sbjct: 868 KFELLDRILPKFRATGHRVLMFFQMTQIMNIMEDFLRLRGLKYLRLDGSTKSDDRSDLLK 927 Query: 103 EWNEGKIPLL--FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 +N + G GLNLQ + ++ F W+ + Q R + G Sbjct: 928 LFNAPDSEYFCFLLSTRAGGLGLNLQ-SADTVIIFDSDWNPHQDLQA-----QDRAHRIG 981 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 K V + LI+ N+++E +L+R + K + ++ A K Sbjct: 982 QKNEVRILRLISSNSVEEKILERAQFKLDMDGKVIQAGK 1020 >gi|261335950|emb|CBH09283.1| putative DNA excision repair protein ERCC-6 [Heliconius melpomene] Length = 944 Score = 90.4 bits (223), Expect = 2e-16, Method: Composition-based stats. Identities = 29/140 (20%), Positives = 57/140 (40%), Gaps = 17/140 (12%) Query: 67 NAAPIIVAYHFNSDLARLQKAFPQGRT----------LDKDPCTIQEWNE-GKIPLLFAH 115 ++ + L L++ + + + + I+ +NE K + A Sbjct: 516 QGHRTLIFSQSRAMLCILEQHLQKHKFEYLKMDGSVSVAQRQNLIKTFNENAKYLVFLAT 575 Query: 116 PASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNT 175 G G+NL G + ++ + W+ Q ER + G +R V VY L++ T Sbjct: 576 TRVGGLGVNLT-GADRVIIYDPDWNPATDNQAKERAW-----RIGQQRNVTVYRLLSAGT 629 Query: 176 IDELVLQRLRTKSTIQDLLL 195 I+E + QR K+ + + +L Sbjct: 630 IEEKIYQRQIFKNFLSNKIL 649 >gi|256272897|gb|EEU07865.1| Isw1p [Saccharomyces cerevisiae JAY291] Length = 1129 Score = 90.4 bits (223), Expect = 2e-16, Method: Composition-based stats. Identities = 26/143 (18%), Positives = 58/143 (40%), Gaps = 18/143 (12%) Query: 66 ANAAPIIVAYHFNSDLARLQ---------KAFPQGRTLDKDP-CTIQEWNEGKIP--LLF 113 + +++ + L L+ G T +D I ++N + Sbjct: 516 GEGSRVLIFSQMSRLLDILEDYCYFRNYEYCRIDGSTAHEDRIQAIDDYNAPDSKKFVFL 575 Query: 114 AHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQ 173 + G G+NL +++V + W+ + Q ++R + G K+ V V+ L+ Sbjct: 576 LTTRAGGLGINLT-SADVVVLYDSDWNPQADLQAMDR-----AHRIGQKKQVKVFRLVTD 629 Query: 174 NTIDELVLQRLRTKSTIQDLLLN 196 N+++E +L+R K + L++ Sbjct: 630 NSVEEKILERATQKLRLDQLVIQ 652 >gi|300796537|ref|NP_001178977.1| chromodomain-helicase-DNA-binding protein 1 [Bos taurus] Length = 1810 Score = 90.0 bits (222), Expect = 2e-16, Method: Composition-based stats. Identities = 27/153 (17%), Positives = 56/153 (36%), Gaps = 21/153 (13%) Query: 68 AAPIIVAYHFNSDLARLQKAFP---------QGRTLDK-DPCTIQEWN-EGKIPL-LFAH 115 +++ L L + G + + +N EG Sbjct: 816 GNRVLIFSQMVRMLDILAEYLKYRQFPFQRLDGSIKGELRKQALDHFNAEGSEDFCFLLS 875 Query: 116 PASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNT 175 + G G+NL + +V F W+ + Q R + G K+ V +Y L+ + + Sbjct: 876 TRAGGLGINL-ASADTVVIFDSDWNPQNDLQAQAR-----AHRIGQKKQVNIYRLVTKGS 929 Query: 176 IDELVLQRLRTKSTIQDLL---LNALKKETIHV 205 ++E +L+R + K + L+ ++ K +H Sbjct: 930 VEEDILERAKKKMVLDHLVIQRMDTTGKTVLHT 962 >gi|194874037|ref|XP_001973329.1| GG16034 [Drosophila erecta] gi|190655112|gb|EDV52355.1| GG16034 [Drosophila erecta] Length = 869 Score = 90.0 bits (222), Expect = 2e-16, Method: Composition-based stats. Identities = 25/153 (16%), Positives = 57/153 (37%), Gaps = 20/153 (13%) Query: 52 HDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFP----QGRTLDK------DPC 99 K++ L ++++ A+ +++ L L+ Q +D Sbjct: 558 ASGKLELLSKMLKQLKADNHRVLIFSQMTKMLNILENFLEEEGYQYERIDGLIKGDLRQR 617 Query: 100 TIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 I +N K + + G G+NL + ++ F W+ Q +R Sbjct: 618 AIDRFNAPKAEQFVFLLSTRAGGLGINL-ATADTVIIFDSDWNPHNDVQA-----FSRAH 671 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 + G + V +Y + N+++E ++Q + K + Sbjct: 672 RMGQTKKVMIYRFVTHNSVEERMMQVAKHKMML 704 >gi|45935136|gb|AAS79594.1| putative DNA repair protein [Ipomoea trifida] gi|117166029|dbj|BAF36331.1| hypothetical protein [Ipomoea trifida] Length = 1040 Score = 90.0 bits (222), Expect = 2e-16, Method: Composition-based stats. Identities = 37/160 (23%), Positives = 65/160 (40%), Gaps = 21/160 (13%) Query: 42 YDEEKHWKEVHDEKIKALEVIIEKANA--APIIVAYHFNSDLARLQKAFPQ--------G 91 D EK+W E K+ AL +E+ A + IV + + L LQ A + Sbjct: 864 IDVEKNWVE--SSKVTALLHELEQLRAVNSKSIVFSQWTAFLDLLQIALARNDISFLRLD 921 Query: 92 RTLDK--DPCTIQEWNEGK-IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMI 148 TL++ I+ ++E + +L + G G+NL N V WW+ +Q + Sbjct: 922 GTLNQQQREKVIKRFSEEDSVLVLLMSLKAGGVGINLTAASNAFVL-DPWWNPAVEEQAV 980 Query: 149 ERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKS 188 R+ + G + V + I + T++E + K Sbjct: 981 MRV-----HRIGQTKRVAIKRFIVKGTVEERMEAVQARKQ 1015 >gi|116197901|ref|XP_001224762.1| hypothetical protein CHGG_07106 [Chaetomium globosum CBS 148.51] gi|88178385|gb|EAQ85853.1| hypothetical protein CHGG_07106 [Chaetomium globosum CBS 148.51] Length = 1129 Score = 90.0 bits (222), Expect = 2e-16, Method: Composition-based stats. Identities = 29/137 (21%), Positives = 50/137 (36%), Gaps = 17/137 (12%) Query: 67 NAAPIIVAYHFNSDLARLQKAF----------PQGRTLDKDPCTIQEWN-EGKIPLLFAH 115 N ++V H L LQ F + ++ + ++N + + Sbjct: 589 NGDKVLVFSHSVRLLRILQHLFHNTSYNVSFLDGTLSYEERQKVVDDFNSDPSQFVFLIS 648 Query: 116 PASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNT 175 + G GLN+ N +V F W+ Q R + G R V V+ L++ T Sbjct: 649 TKAGGVGLNIT-SANKVVIFDPHWNPAYDLQA-----QDRAYRIGQVRDVDVFRLVSAGT 702 Query: 176 IDELVLQRLRTKSTIQD 192 I+E+V R K + Sbjct: 703 IEEIVYARQIYKQQQAN 719 >gi|46128325|ref|XP_388716.1| hypothetical protein FG08540.1 [Gibberella zeae PH-1] gi|116090837|gb|ABJ56000.1| RING-13 protein [Gibberella zeae] Length = 1133 Score = 90.0 bits (222), Expect = 2e-16, Method: Composition-based stats. Identities = 26/173 (15%), Positives = 64/173 (36%), Gaps = 22/173 (12%) Query: 46 KHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQ-----KAFPQGRTLDKDP 98 K W+ K+ ++++ I+ + L LQ + + D Sbjct: 954 KTWE--PSSKVTECLNLVKEIEGTGEKTIIFSQWTLLLDLLQVAMKRENMAKPERYDGSM 1011 Query: 99 CTIQE------WNEGK-IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERI 151 Q + +GK + ++ + GLNL + ++ +W+ Q ++R Sbjct: 1012 SATQRNIAAHNFRDGKDVRVMLVSLKAGNAGLNLT-AASRVIIMDPFWNPYIEMQAVDR- 1069 Query: 152 GVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIH 204 + G ++ V VY ++ T+++ ++ K + + L+ + +I Sbjct: 1070 ----AYRIGQQKPVKVYRILTNETVEDRIVDLQNKKKEMVEAALDEKQGASIG 1118 >gi|325188110|emb|CCA22651.1| chromodomainhelicaseDNAbinding protein putative [Albugo laibachii Nc14] Length = 1883 Score = 90.0 bits (222), Expect = 2e-16, Method: Composition-based stats. Identities = 25/141 (17%), Positives = 49/141 (34%), Gaps = 18/141 (12%) Query: 67 NAAPIIVAYHFNSDLARLQKA---------FPQGRTLDKDPCT-IQEW--NEGKIPLLFA 114 +++ F L L++ G T I + K + Sbjct: 1226 EGRKVLIFSQFLKQLDLLERYCEYHGFGYERLDGSTNGAARQASIDRFSRPNAKSFVFLL 1285 Query: 115 HPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQN 174 + G G+NL + +V F W+ + Q R + G + V +Y L+ +N Sbjct: 1286 STKAGGVGINL-IAADTVVIFDSDWNPQNDLQAQSRC-----HRIGQSKTVQIYRLVTRN 1339 Query: 175 TIDELVLQRLRTKSTIQDLLL 195 T + + +R K ++ +L Sbjct: 1340 TYESEMFERASQKLGLEHAVL 1360 >gi|297477562|ref|XP_002689460.1| PREDICTED: chromodomain helicase DNA binding protein 1-like [Bos taurus] gi|296485027|gb|DAA27142.1| chromodomain helicase DNA binding protein 1-like [Bos taurus] Length = 1810 Score = 90.0 bits (222), Expect = 2e-16, Method: Composition-based stats. Identities = 27/153 (17%), Positives = 56/153 (36%), Gaps = 21/153 (13%) Query: 68 AAPIIVAYHFNSDLARLQKAFP---------QGRTLDK-DPCTIQEWN-EGKIPL-LFAH 115 +++ L L + G + + +N EG Sbjct: 816 GNRVLIFSQMVRMLDILAEYLKYRQFPFQRLDGSIKGELRKQALDHFNAEGSEDFCFLLS 875 Query: 116 PASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNT 175 + G G+NL + +V F W+ + Q R + G K+ V +Y L+ + + Sbjct: 876 TRAGGLGINL-ASADTVVIFDSDWNPQNDLQAQAR-----AHRIGQKKQVNIYRLVTKGS 929 Query: 176 IDELVLQRLRTKSTIQDLL---LNALKKETIHV 205 ++E +L+R + K + L+ ++ K +H Sbjct: 930 VEEDILERAKKKMVLDHLVIQRMDTTGKTVLHT 962 >gi|307182228|gb|EFN69559.1| Chromodomain-helicase-DNA-binding protein 1 [Camponotus floridanus] Length = 1831 Score = 90.0 bits (222), Expect = 2e-16, Method: Composition-based stats. Identities = 37/224 (16%), Positives = 78/224 (34%), Gaps = 42/224 (18%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEV 61 K Y ++ + +G + N + KC N A + +E + L+ Sbjct: 713 KNYDALRKGM----KGSSSTFLNIVIELKKC---CNHAFLTKPNEAEREKGNG--DYLQT 763 Query: 62 IIEKAN---------------AAPIIVAYHFNSDLARL-----QKAFPQGRTLDK----- 96 +I + +++ L L ++ FP R Sbjct: 764 LIRGSGKLVLLDKLLVRLRDTGHRVLIFSQMVKMLDILSEYLQKRHFPFQRLDGSIKGEL 823 Query: 97 DPCTIQEWN-EGKIPL-LFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 + +N EG + G G+NL + ++ F W+ + Q R Sbjct: 824 RKQALDHFNAEGSQDFCFLLSTRAGGLGINL-ATADTVIIFDSDWNPQNDLQAQAR---- 878 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNAL 198 + G K V +Y L+ +N+++E +++R + K + L++ + Sbjct: 879 -AHRIGQKNKVNIYRLVTKNSVEEEIVERAKQKMVLDHLVIQRM 921 >gi|281338942|gb|EFB14526.1| hypothetical protein PANDA_015067 [Ailuropoda melanoleuca] Length = 1218 Score = 90.0 bits (222), Expect = 2e-16, Method: Composition-based stats. Identities = 31/178 (17%), Positives = 59/178 (33%), Gaps = 27/178 (15%) Query: 34 QLANGAVYYDEEKHWKEVHDE-------KIKALEVIIEKA--NAAPIIVAYHFNSDLARL 84 Q AN + H ++ D+ K+ L ++++ +V L + Sbjct: 415 QGANEGEDASDVDHIDQITDDTLMEESGKMIFLIELLKRLRDEGHQTLVFSQSRQILNII 474 Query: 85 Q-----KAFPQGRTLDKDPCTIQE-------WNEGKIPLLFAHPASCGHGLNLQYGGNIL 132 + + F R ++ + G GL L + Sbjct: 475 EHLLKNRHFKILRIDGTVTHLVEREKRINLFQQNKDYSVFLLTTQVGGVGLTLT-AATRV 533 Query: 133 VFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 V F W+ Q ++R+ + G K V VY LI T++E + +R K ++ Sbjct: 534 VIFDPSWNPATDAQAVDRV-----YRIGQKENVVVYRLITCGTVEEKIYRRQVFKDSL 586 >gi|195124269|ref|XP_002006616.1| GI18484 [Drosophila mojavensis] gi|193911684|gb|EDW10551.1| GI18484 [Drosophila mojavensis] Length = 603 Score = 90.0 bits (222), Expect = 2e-16, Method: Composition-based stats. Identities = 28/144 (19%), Positives = 60/144 (41%), Gaps = 18/144 (12%) Query: 65 KANAAPIIVAYHFNSDLARLQ---------KAFPQGRTLDKDP-CTIQEWNEGKIP--LL 112 + + +++ L L+ G+T +D I+E+N P + Sbjct: 358 QEQGSRVLIFSQMTRMLDILEDYCNWRKFDYCRLDGQTPHEDRDKLIREYNMENSPKFIF 417 Query: 113 FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIA 172 + G G+NL ++++ + W+ + Q ++R + G K+ V V+ LIA Sbjct: 418 MLSTRAGGLGINL-ATADVVIIYDSDWNPQMDLQAMDR-----AHRIGQKKQVRVFRLIA 471 Query: 173 QNTIDELVLQRLRTKSTIQDLLLN 196 + T+DE +L+ K + ++ Sbjct: 472 EKTVDEKILEHANIKLRLDRKVIQ 495 >gi|50310725|ref|XP_455384.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140] gi|49644520|emb|CAG98092.1| KLLA0F06710p [Kluyveromyces lactis] Length = 1096 Score = 90.0 bits (222), Expect = 2e-16, Method: Composition-based stats. Identities = 38/223 (17%), Positives = 81/223 (36%), Gaps = 39/223 (17%) Query: 7 FQRELYCDLQGENIEAFNSAS--------KTVKCLQLAN-------------GAVYYDEE 45 Q++ Y + ++I+A N ++ +QL G Y +E Sbjct: 381 MQKKWYKQILEKDIDAVNGSNGQKESKTRLLNIVMQLRKCCNHPYLFDGAEPGPPYTTDE 440 Query: 46 KHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQ---------KAFPQGRTLDK 96 K+ + K + +++ + L L+ G T + Sbjct: 441 HLVYNSAKLKVLDKLLKKFKEQGSRVLIFSQMSRVLDILEDYCYFREYEYCRIDGSTAHE 500 Query: 97 DP-CTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGV 153 D I ++N + + G G+NL +I+V + W+ + Q ++R Sbjct: 501 DRINAIDDYNAPDSKKFIFLLTTRAGGLGINLTT-ADIVVLYDSDWNPQADLQAMDR--- 556 Query: 154 TRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + G K+ V V+ + N+++E +L+R K + L++ Sbjct: 557 --AHRIGQKKQVRVFRFVTDNSVEEKILERATQKLKLDQLVIQ 597 >gi|156086958|ref|XP_001610886.1| DNA repair and recombination protein RAD54-like [Babesia bovis T2Bo] gi|154798139|gb|EDO07318.1| DNA repair and recombination protein RAD54-like , putative [Babesia bovis] Length = 824 Score = 90.0 bits (222), Expect = 2e-16, Method: Composition-based stats. Identities = 30/145 (20%), Positives = 59/145 (40%), Gaps = 18/145 (12%) Query: 63 IEKANAAPIIVAYHFNSDL---ARLQK--AFPQGRT-----LDKDPCTIQEWNEGKI--P 110 I + + I++ ++ L R+ K +P R + K + +N+ Sbjct: 494 IRRTTSDRIVIISNYTQTLDVFERMCKQCNYPCVRLDGTLSIKKRHKLVTTFNDPNSHSF 553 Query: 111 LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYL 170 + G G+NL G N LV F W+ +Q + R+ + G ++ ++Y Sbjct: 554 AFLLSSKAGGCGINL-IGANRLVLFDPDWNPANDKQALARVW-----RDGQRKTCYIYRF 607 Query: 171 IAQNTIDELVLQRLRTKSTIQDLLL 195 + TI+E + QR K + +L+ Sbjct: 608 FSTGTIEEKIYQRQICKDGLSAMLV 632 >gi|190409514|gb|EDV12779.1| DNA dependent ATPase [Saccharomyces cerevisiae RM11-1a] Length = 1085 Score = 90.0 bits (222), Expect = 2e-16, Method: Composition-based stats. Identities = 32/147 (21%), Positives = 54/147 (36%), Gaps = 18/147 (12%) Query: 56 IKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRT-LDKDPCTIQEWNEGKIPLLFA 114 + LE I + DL+ L G T + + +N + Sbjct: 680 LDILEEFISTKD-----------PDLSHLNYLRMDGTTNIKGRQSLVDRFNNESFDVFLL 728 Query: 115 HPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQN 174 G G+NL G N ++ F W+ Q ER + G KR V +Y L+ Sbjct: 729 TTRVGGLGVNLT-GANRIIIFDPDWNPSTDMQARERAW-----RIGQKREVSIYRLMVGG 782 Query: 175 TIDELVLQRLRTKSTIQDLLLNALKKE 201 +I+E + R K + + +L K++ Sbjct: 783 SIEEKIYHRQIFKQFLTNRILTDPKQK 809 >gi|172040368|ref|YP_001800082.1| putative DNA/RNA helicase [Corynebacterium urealyticum DSM 7109] gi|171851672|emb|CAQ04648.1| putative DNA/RNA helicase [Corynebacterium urealyticum DSM 7109] Length = 1059 Score = 90.0 bits (222), Expect = 2e-16, Method: Composition-based stats. Identities = 28/188 (14%), Positives = 68/188 (36%), Gaps = 24/188 (12%) Query: 26 ASKTVKCLQLANGAVYYDEEKHWK----EVHDEKIKALEVIIEKA--NAAPIIVAYHFNS 79 + VK Q+ N ++ + + KI+ + +I +A +++ F S Sbjct: 827 LASLVKIKQICNHPAHFAGDGSGILRGGKHRSPKIERIVELIGQAVAEGKKVLLFTQFPS 886 Query: 80 DLARLQKA-----------FPQGRTLDKDPCTIQEWNEGKIP-LLFAHPASCGHGLNLQY 127 L A + + + ++ P ++ + G G+ L Sbjct: 887 FGRMLAPAIEAEYGMPVLQLDGAVSRSRRTELVAQFQRDSGPGVMLLSVRAGGTGITLTR 946 Query: 128 GGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTK 187 ++++ WW+ Q +R + G ++ V VY ++ T+DE + + + K Sbjct: 947 -ASVVIHIDRWWNPAVEDQATDR-----AYRIGQEQDVDVYKFVSAGTLDERIHEIITGK 1000 Query: 188 STIQDLLL 195 + ++ Sbjct: 1001 RELAGTVV 1008 >gi|50309923|ref|XP_454975.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140] gi|49644110|emb|CAH00062.1| KLLA0E22617p [Kluyveromyces lactis] Length = 1033 Score = 90.0 bits (222), Expect = 2e-16, Method: Composition-based stats. Identities = 27/151 (17%), Positives = 51/151 (33%), Gaps = 21/151 (13%) Query: 66 ANAAPIIVAYHFNSDLARLQK---------------AFPQGRTLDKDPCTIQEWNEGKIP 110 + ++ L LQ+ + + ++N Sbjct: 635 SQGHKTLLFTQSRQMLDILQEFISYKDPELSDLKFLRMDGTTNIGSRQSLVDKFNNEPYD 694 Query: 111 LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYL 170 + G G+NL G N ++ F W+ Q ER + G KR V +Y L Sbjct: 695 VFLLTTRVGGLGINLT-GANRIIIFDPDWNPSTDMQARERAW-----RIGQKREVTIYRL 748 Query: 171 IAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 + +I+E + R K + + +L K++ Sbjct: 749 MIAGSIEEKIYHRQIFKQFLSNKILKDPKQK 779 >gi|323347929|gb|EGA82189.1| Rad26p [Saccharomyces cerevisiae Lalvin QA23] Length = 1085 Score = 90.0 bits (222), Expect = 2e-16, Method: Composition-based stats. Identities = 32/147 (21%), Positives = 54/147 (36%), Gaps = 18/147 (12%) Query: 56 IKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRT-LDKDPCTIQEWNEGKIPLLFA 114 + LE I + DL+ L G T + + +N + Sbjct: 680 LDILEEFISTKD-----------PDLSHLNYLRMDGTTNIKGRQSLVDRFNNESFDVFLL 728 Query: 115 HPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQN 174 G G+NL G N ++ F W+ Q ER + G KR V +Y L+ Sbjct: 729 TTRVGGLGVNLT-GANRIIIFDPDWNPSTDMQARERAW-----RIGQKREVSIYRLMVGG 782 Query: 175 TIDELVLQRLRTKSTIQDLLLNALKKE 201 +I+E + R K + + +L K++ Sbjct: 783 SIEEKIYHRQIFKQFLTNRILTDPKQK 809 >gi|256270798|gb|EEU05949.1| Rad26p [Saccharomyces cerevisiae JAY291] Length = 1085 Score = 90.0 bits (222), Expect = 2e-16, Method: Composition-based stats. Identities = 32/147 (21%), Positives = 54/147 (36%), Gaps = 18/147 (12%) Query: 56 IKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRT-LDKDPCTIQEWNEGKIPLLFA 114 + LE I + DL+ L G T + + +N + Sbjct: 680 LDILEEFISTKD-----------PDLSHLNYLRMDGTTNIKGRQSLVDRFNNESFDVFLL 728 Query: 115 HPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQN 174 G G+NL G N ++ F W+ Q ER + G KR V +Y L+ Sbjct: 729 TTRVGGLGVNLT-GANRIIIFDPDWNPSTDMQARERAW-----RIGQKREVSIYRLMVGG 782 Query: 175 TIDELVLQRLRTKSTIQDLLLNALKKE 201 +I+E + R K + + +L K++ Sbjct: 783 SIEEKIYHRQIFKQFLTNRILTDPKQK 809 >gi|167999325|ref|XP_001752368.1| predicted protein [Physcomitrella patens subsp. patens] gi|162696763|gb|EDQ83101.1| predicted protein [Physcomitrella patens subsp. patens] Length = 729 Score = 90.0 bits (222), Expect = 2e-16, Method: Composition-based stats. Identities = 29/133 (21%), Positives = 52/133 (39%), Gaps = 17/133 (12%) Query: 69 APIIVAYHFNSDLARL----QKAFPQGRTLDKD------PCTIQEWNE-GKIPLLFAHPA 117 IV + S L L +K+ R LD + ++N ++ ++ Sbjct: 575 EKAIVFSQWTSMLDLLELPLKKSGLCYRRLDGTMSVVARDRAVSDFNTLPEVTVMIMSLK 634 Query: 118 SCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 + GLN+ ++L+ +WW+ Q I+R + G R V V +NTI+ Sbjct: 635 AASLGLNMVAASHVLLL-DVWWNPTTEDQAIDR-----AHRIGQTRTVNVSRFTVKNTIE 688 Query: 178 ELVLQRLRTKSTI 190 + +L K I Sbjct: 689 DRILALQERKRQI 701 >gi|328868808|gb|EGG17186.1| chromo domain-containing protein [Dictyostelium fasciculatum] Length = 1716 Score = 90.0 bits (222), Expect = 2e-16, Method: Composition-based stats. Identities = 26/143 (18%), Positives = 54/143 (37%), Gaps = 18/143 (12%) Query: 68 AAPIIVAYHFNSDLARLQKAFPQGRTL----------DKDPCTIQEWNEGKIP--LLFAH 115 +++ L L + L +K + +N P Sbjct: 925 GHRVLIFSQMVRMLDILARYLKHRGFLFQRLDGSMSREKRSQAMDRFNAEGSPDFCFLLS 984 Query: 116 PASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNT 175 + G G+NL + +V F ++ + Q R + G K AV +Y L+ + T Sbjct: 985 TRAGGLGINLST-ADTVVIFDSDYNPQNDLQAEAR-----AHRIGQKNAVNIYRLVTKKT 1038 Query: 176 IDELVLQRLRTKSTIQDLLLNAL 198 ++E +L+R + K + L++ ++ Sbjct: 1039 VEEDILERAKQKMVLDHLVIQSM 1061 >gi|242033923|ref|XP_002464356.1| hypothetical protein SORBIDRAFT_01g016830 [Sorghum bicolor] gi|241918210|gb|EER91354.1| hypothetical protein SORBIDRAFT_01g016830 [Sorghum bicolor] Length = 888 Score = 90.0 bits (222), Expect = 2e-16, Method: Composition-based stats. Identities = 34/198 (17%), Positives = 73/198 (36%), Gaps = 20/198 (10%) Query: 14 DLQGENIEAFNSASKTVKCLQLANGAVYYDEE-KHWKEVHDEKIKALEVIIE--KANAAP 70 + + + +A +A+ + L G + H K++ALE ++ Sbjct: 491 EPEKQKKDAELAAAVFGADIDLVGGTAKSENFMGLSDAEHCGKMRALERLLSLWTQQGDK 550 Query: 71 IIVAYHFNSDLARLQK----------AFPQGRTLDKDPCTIQEWN-EGKIPLLFAHPASC 119 I++ + L L+K F ++ + E+N + + Sbjct: 551 ILLFSYSVRMLDILEKFLIRKGYCFSRFDGTTPMNARQSLVDEFNRSPSKQVFLISTRAG 610 Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 G+NL N +V F W+ + Q R + G +R V V+ L+ +++EL Sbjct: 611 NLGVNL-VSANRVVIFDPSWNPAQDLQA-----QDRSFRYGQRRHVTVFRLLGAGSLEEL 664 Query: 180 VLQRLRTKSTIQDLLLNA 197 + R K + ++ ++ Sbjct: 665 IYSRQIYKQQLSNIAVSG 682 >gi|123977009|ref|XP_001330686.1| SNF2 family N-terminal domain containing protein [Trichomonas vaginalis G3] gi|121897321|gb|EAY02446.1| SNF2 family N-terminal domain containing protein [Trichomonas vaginalis G3] Length = 1326 Score = 90.0 bits (222), Expect = 2e-16, Method: Composition-based stats. Identities = 36/170 (21%), Positives = 67/170 (39%), Gaps = 29/170 (17%) Query: 53 DEKIKALEVII----------EKANAAPIIVAYHFNSDLARLQKA------------FPQ 90 K+ L ++ E+ +++ S + + K F Sbjct: 1115 SGKLVVLRDLLLYTLGFGPGKEEVLRQKVVIFCESESAIKEIIKYVIPCLVDTTFVKFDS 1174 Query: 91 GRTLDKDPCTIQEWNEGKIP-LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIE 149 + D+ I + P L A ++ GHG+NL N++VFF L W+ Q + Sbjct: 1175 SLSQDERDKNIDAFMSENGPDLFIATKSAAGHGINLT-AANVVVFFELNWNPAIDLQAED 1233 Query: 150 RIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 R+ + G K+ V +Y ++ + TIDE + + K I D +++ K Sbjct: 1234 RV-----HRIGQKKQVRIYSIVMEGTIDERIENSQKRKKMIMDSVIHDQK 1278 >gi|195453451|ref|XP_002073794.1| GK12953 [Drosophila willistoni] gi|194169879|gb|EDW84780.1| GK12953 [Drosophila willistoni] Length = 1069 Score = 90.0 bits (222), Expect = 2e-16, Method: Composition-based stats. Identities = 35/169 (20%), Positives = 66/169 (39%), Gaps = 25/169 (14%) Query: 52 HDEKIKALEVIIE------KANAAPIIVAYHFNSDLARLQKAFPQGR----------TLD 95 K+ + I++ K+N IIV + L L+ + + + Sbjct: 895 PSSKMLKIIEILKTSIFRGKSNDKAIIV-SQWTGVLDILRDHLEKDKFDTLSLNGTIPVK 953 Query: 96 KDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGV 153 + ++N+ + P +L + G GLNL G N L+ L W+ + Q +RI Sbjct: 954 SRQDIVNQFNDPRNPKRILLLSLTAGGVGLNL-IGANHLLLLDLHWNPQLECQAQDRI-- 1010 Query: 154 TRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKET 202 + G K+ V +Y + T++E + K + + +L K T Sbjct: 1011 ---YRVGQKKDVVIYKFMCLETVEERIKALQDRKLELAEGVLTGAKVST 1056 >gi|50288627|ref|XP_446743.1| hypothetical protein [Candida glabrata CBS 138] gi|49526051|emb|CAG59670.1| unnamed protein product [Candida glabrata] Length = 1354 Score = 90.0 bits (222), Expect = 2e-16, Method: Composition-based stats. Identities = 35/159 (22%), Positives = 65/159 (40%), Gaps = 20/159 (12%) Query: 55 KIKALEVIIEK--ANAAPIIVAYH------FNSDLAR---LQKAFPQGRTLDKDPCT-IQ 102 K + L+ I+ K A +++ + D R L+ G T +D ++ Sbjct: 775 KFELLDRILPKFKATGHRVLIFFQMTQVMDIMEDFLRMRDLKYMRLDGSTKAEDRNDMLK 834 Query: 103 EWN--EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 E+N + + G GLNLQ + ++ F W+ + Q R + G Sbjct: 835 EFNVENSEYFCFLLSTRAGGLGLNLQ-SADTVIIFDTDWNPHQDLQA-----QDRAHRIG 888 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 K V + LI ++++E++L+R K I ++ A K Sbjct: 889 QKNEVRILRLITTDSVEEVILERAMQKLDIDGKVIQAGK 927 >gi|322711378|gb|EFZ02951.1| chromatin remodelling complex ATPase chain ISW1 [Metarhizium anisopliae ARSEF 23] Length = 1056 Score = 90.0 bits (222), Expect = 2e-16, Method: Composition-based stats. Identities = 39/226 (17%), Positives = 81/226 (35%), Gaps = 43/226 (19%) Query: 6 KFQRELYCDLQGENIEAFNSAS--------KTVKCLQLAN-------------GAVYYDE 44 Q + Y + ++I+A N A +QL G Y + Sbjct: 363 DMQVKWYQKILEKDIDAVNGAGGKRESKTRLLNIVMQLRKCCNHPYLFEGAEPGPPYTTD 422 Query: 45 EKHWKEVHDEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQK----------AFPQGR 92 E + K+ L+ ++ + + +++ + L L+ G Sbjct: 423 EHLV--YNAGKMAVLDKLLVRLQKQGSRVLIFSQMSRLLDILEDYCVFRDYKYCRIDGGT 480 Query: 93 TLDKDPCTIQEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 + I E+N+ + + + G G+NL +I++ + W+ + Q ++R Sbjct: 481 AHEDRIAAIDEYNKPGSEKFVFLLTTRAGGLGINLTT-ADIVILYDSDWNPQADLQAMDR 539 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + G + V VY + N I+E VL+R K + L++ Sbjct: 540 -----AHRIGQTKQVVVYRFVTDNAIEEKVLERAAQKLRLDQLVIQ 580 >gi|281346214|gb|EFB21798.1| hypothetical protein PANDA_016920 [Ailuropoda melanoleuca] Length = 1488 Score = 90.0 bits (222), Expect = 2e-16, Method: Composition-based stats. Identities = 35/177 (19%), Positives = 64/177 (36%), Gaps = 21/177 (11%) Query: 38 GAVYYDEEKHWKEVHDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQK--------- 86 G + D+ +WK K+ +E +++ +++ L L+ Sbjct: 823 GELEEDQFGYWKR--SGKMIVVESLLKIWHKQGQRVLLFSQSRQMLDILEVFLRAQKYSY 880 Query: 87 -AFPQGRTLDKDPCTIQEWNEG-KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEH 144 + I +NE I + G G+NL G N ++ + W+ Sbjct: 881 LKMDGTTAIASRQPLITRYNEDTSIFVFLLTTRVGGIGVNLT-GANRVIIYDPDWNPSTD 939 Query: 145 QQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 Q ER + G K+ V VY L+ TI+E + R K + + +L K+ Sbjct: 940 TQARERAW-----RIGQKKQVTVYRLLTAGTIEEKIFHRQIFKQFLTNRVLKDPKQR 991 >gi|281361297|ref|NP_649751.2| CG10445, isoform C [Drosophila melanogaster] gi|272476855|gb|AAF54166.2| CG10445, isoform C [Drosophila melanogaster] Length = 945 Score = 90.0 bits (222), Expect = 2e-16, Method: Composition-based stats. Identities = 33/151 (21%), Positives = 64/151 (42%), Gaps = 18/151 (11%) Query: 56 IKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGR----------TLDKDPCTIQEWN 105 I LE ++ N IIV + S LA ++K T + ++++N Sbjct: 776 IDKLEELLTGTNDK-IIVTSQWVSYLAIVRKRLQDLSWETLDFNGQLTAKEREIVLRDFN 834 Query: 106 -EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA 164 + +L + G GLNL ++L+ L W+ + +Q +RI + G + Sbjct: 835 ANNEKRVLLLSLTAGGVGLNLNVANHMLI-VDLHWNPQLERQAQDRI-----YRYGQTKP 888 Query: 165 VFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 F+Y + Q+T+++ + K I ++L Sbjct: 889 TFIYRYMCQDTVEQRIKSLQDCKLEIAKVVL 919 >gi|219120207|ref|XP_002180847.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1] gi|217407563|gb|EEC47499.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1] Length = 495 Score = 90.0 bits (222), Expect = 2e-16, Method: Composition-based stats. Identities = 26/161 (16%), Positives = 54/161 (33%), Gaps = 24/161 (14%) Query: 53 DEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGR----------TLDKDPCT 100 K+ L+ ++ + + ++V F L L+ F T + Sbjct: 341 SGKLILLDKLLPRLKSEGHRVLVFSQFKIMLDILEDYFSMREMKFERIDGSITGKRRQQA 400 Query: 101 IQEWNEGKIP------LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 I + +I ++ + G G+NL + + F W+ + Q R Sbjct: 401 IDRFQAPEIDGRKPPFIMMLSTRAGGVGINLT-AADTCIIFDSDWNPQNDLQAQARC--- 456 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 + G + V VY L+ + T + + K + +L Sbjct: 457 --HRIGQTKEVKVYRLLTRKTYEMQMFHMSSMKMGLDQAVL 495 >gi|308497648|ref|XP_003111011.1| hypothetical protein CRE_04804 [Caenorhabditis remanei] gi|308242891|gb|EFO86843.1| hypothetical protein CRE_04804 [Caenorhabditis remanei] Length = 966 Score = 90.0 bits (222), Expect = 2e-16, Method: Composition-based stats. Identities = 26/156 (16%), Positives = 62/156 (39%), Gaps = 19/156 (12%) Query: 57 KALEVIIEKANAAPIIVAYHFNSDLARLQ----------KAFPQGRTLDKDPCTIQEWN- 105 K L I + +++ F S L L+ K + I E+N Sbjct: 759 KMLPEI--QKKGDKVLIFSQFTSMLDILEVYLNIRGYSYKRLDGQTPVLDRQEMINEFNI 816 Query: 106 EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 + + + G G+NL +I++ + ++ +Q +R + G +++V Sbjct: 817 SKDLFVFLLSTKAGGLGINLTSANHIIIH-DIDFNPYNDKQAEDRC-----HRMGQEKSV 870 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 V L+++ T++ +L + K ++ + + +K + Sbjct: 871 HVTRLVSKCTVEIGMLALAKKKLQLEKQVTDGVKGQ 906 >gi|301783501|ref|XP_002927161.1| PREDICTED: DNA excision repair protein ERCC-6-like [Ailuropoda melanoleuca] Length = 1481 Score = 90.0 bits (222), Expect = 2e-16, Method: Composition-based stats. Identities = 35/177 (19%), Positives = 64/177 (36%), Gaps = 21/177 (11%) Query: 38 GAVYYDEEKHWKEVHDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQK--------- 86 G + D+ +WK K+ +E +++ +++ L L+ Sbjct: 816 GELEEDQFGYWKR--SGKMIVVESLLKIWHKQGQRVLLFSQSRQMLDILEVFLRAQKYSY 873 Query: 87 -AFPQGRTLDKDPCTIQEWNEG-KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEH 144 + I +NE I + G G+NL G N ++ + W+ Sbjct: 874 LKMDGTTAIASRQPLITRYNEDTSIFVFLLTTRVGGIGVNLT-GANRVIIYDPDWNPSTD 932 Query: 145 QQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 Q ER + G K+ V VY L+ TI+E + R K + + +L K+ Sbjct: 933 TQARERAW-----RIGQKKQVTVYRLLTAGTIEEKIFHRQIFKQFLTNRVLKDPKQR 984 >gi|183979217|dbj|BAG30708.1| decrease in DNA methylation 1b [Brassica rapa] Length = 766 Score = 90.0 bits (222), Expect = 2e-16, Method: Composition-based stats. Identities = 27/142 (19%), Positives = 56/142 (39%), Gaps = 18/142 (12%) Query: 66 ANAAPIIVAYHFNSDLARLQKAFPQGRT----------LDKDPCTIQEWNEGK--IPLLF 113 A ++V + L + F + LD+ I E+N+ K + Sbjct: 537 AKNHRVLVFTQWTKILDIMDYYFSEKGFEVCRIDGNVKLDERRRQIDEFNDEKSSCRIFL 596 Query: 114 AHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQ 173 + G G+NL + + + W+ + Q ++R + G + V VY L Sbjct: 597 LSTRAGGLGINLT-AADTCILYDSDWNPQMDLQAMDRC-----HRIGQTKPVHVYRLATA 650 Query: 174 NTIDELVLQRLRTKSTIQDLLL 195 +I+ VL+R +K ++ +++ Sbjct: 651 QSIEGRVLKRAYSKLKLEHVVI 672 >gi|225432404|ref|XP_002276907.1| PREDICTED: hypothetical protein [Vitis vinifera] Length = 3462 Score = 90.0 bits (222), Expect = 2e-16, Method: Composition-based stats. Identities = 31/157 (19%), Positives = 60/157 (38%), Gaps = 20/157 (12%) Query: 55 KIKALEVIIEK--ANAAPIIVAYHFNSDLARLQK--AFPQGRTL--------DKDPCTIQ 102 K++ L+ ++ K A ++ L +++ + Q R L I+ Sbjct: 1405 KLEMLDRLLPKLKATDHRVLFFSTMTRLLDVMEEYLHWKQYRYLRLDGHTSGGDRGALIE 1464 Query: 103 EWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 ++N+ P + + G G+NLQ + ++ F W+ + Q R + G Sbjct: 1465 QFNQPDSPYFIFLLSIRAGGVGVNLQ-AADTVIIFDTDWNPQVDLQAQAR-----AHRIG 1518 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 KR V V L T++E V K + + + A Sbjct: 1519 QKRDVLVLRLETVQTVEEQVRASAEHKLGVANQSITA 1555 >gi|224136306|ref|XP_002326828.1| chromatin remodeling complex subunit [Populus trichocarpa] gi|222835143|gb|EEE73578.1| chromatin remodeling complex subunit [Populus trichocarpa] Length = 866 Score = 90.0 bits (222), Expect = 2e-16, Method: Composition-based stats. Identities = 44/243 (18%), Positives = 89/243 (36%), Gaps = 46/243 (18%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQL--ANGAVY---------YDEEKHWKE 50 K Y R+ L + A N S +QL A Y Y+E +H + Sbjct: 299 KVYTSILRKELPKLLALSSSASNHQSLQNMVIQLRKACSHPYLFPGIEPEPYEEGEHLVK 358 Query: 51 VHDEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQKAFPQGR----TLDKDPCTIQEW 104 K+ L+ ++EK + +++ L LQ + LD + + Sbjct: 359 -ASGKLIILDQLLEKLHDSGHRVLLFAQMTHTLDILQDFLELRKYSYERLDGSVRAEERF 417 Query: 105 --------NEGKI---------PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQM 147 G+ + + G GLNL + ++F+ W+ + +Q Sbjct: 418 AAIRSFSGQSGRSGSESDQNSSFVFMISTRAGGVGLNL-VAADTVIFYEQDWNPQVDKQA 476 Query: 148 IERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTK-----STIQDLLLNALKKET 202 ++R + G V L+ +++++E+++QR + K + D ++ +KET Sbjct: 477 LQR-----AHRIGQMNHVLSINLVTRHSVEEVIMQRAKRKLQLSHDVVGDDVMEEDRKET 531 Query: 203 IHV 205 + Sbjct: 532 GGI 534 >gi|328783971|ref|XP_001120586.2| PREDICTED: DNA excision repair protein ERCC-6-like [Apis mellifera] Length = 1134 Score = 90.0 bits (222), Expect = 2e-16, Method: Composition-based stats. Identities = 27/148 (18%), Positives = 51/148 (34%), Gaps = 17/148 (11%) Query: 67 NAAPIIVA---YHFNSDLARLQK-------AFPQGRTLDKDPCTIQEWNEGK-IPLLFAH 115 +++ L L + + TI+ +N+ + Sbjct: 678 QGHRVLLFTQGRQMMHILESLIQNEQYTYLRMDGTTPMSHRQETIRSFNKDSSYFIFLLT 737 Query: 116 PASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNT 175 G G+NL G N +V + W+ Q ER + G + V +Y LI T Sbjct: 738 TRVGGLGVNLT-GANRVVIYDPDWNPATDAQARERAW-----RIGQNKNVTIYRLITAGT 791 Query: 176 IDELVLQRLRTKSTIQDLLLNALKKETI 203 I+E + R K + + +L ++ + Sbjct: 792 IEEKIYHRQIFKILLSNKVLEDPRQRRL 819 >gi|322500409|emb|CBZ35486.1| unnamed protein product [Leishmania donovani BPK282A1] Length = 736 Score = 90.0 bits (222), Expect = 2e-16, Method: Composition-based stats. Identities = 33/170 (19%), Positives = 67/170 (39%), Gaps = 17/170 (10%) Query: 39 AVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRT----- 93 A Y + E ++++ + + A +I+ F S + + A + Sbjct: 493 AQYKNNEFELSTKLRMVLRSIHDMQKNHPADKMIIFSQFTSFMDVISVALDRYNIAFLRI 552 Query: 94 -----LDKDPCTIQEWNEGK-IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQM 147 L I+++ + I ++ A + G GLNL +++V WW+ +Q Sbjct: 553 DGTMSLSNRNAVIRQFQTSEHIKIVLASKTATGVGLNLTAANHVVV-VDPWWNPAIEEQA 611 Query: 148 IERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + R + G K+ V+V I +TI++ + + K D +L A Sbjct: 612 VHRC-----YRIGQKKPVYVTRFIIADTIEQYCYEICQRKKEFGDAVLRA 656 >gi|256070735|ref|XP_002571698.1| helicase [Schistosoma mansoni] gi|238656844|emb|CAZ27928.1| helicase, putative [Schistosoma mansoni] Length = 1035 Score = 90.0 bits (222), Expect = 2e-16, Method: Composition-based stats. Identities = 25/139 (17%), Positives = 53/139 (38%), Gaps = 17/139 (12%) Query: 69 APIIVAYHFNSDLARLQKAF---------PQGRTLDKDP-CTIQEWNEG-KIPLLFAHPA 117 +++ L +Q G +D ++ +NE + + Sbjct: 366 HKVLIFSQMTRMLDIIQDYLTLRGYSYERLDGSVRGEDRFQAVKSFNEDQETFVFLLSTR 425 Query: 118 SCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 + G GLNL + ++F ++ + Q R + G K+ V + L+ ++T++ Sbjct: 426 AGGQGLNL-VSADTVIFVDSDFNPQIDVQAAGR-----AHRIGQKKPVRIVRLVCRHTVE 479 Query: 178 ELVLQRLRTKSTIQDLLLN 196 E +L R K + +LN Sbjct: 480 EAILSRAENKLKLATRVLN 498 >gi|209877056|ref|XP_002139970.1| transcription regulatory protein SNF2 [Cryptosporidium muris RN66] gi|209555576|gb|EEA05621.1| transcription regulatory protein SNF2, putative [Cryptosporidium muris RN66] Length = 1464 Score = 90.0 bits (222), Expect = 2e-16, Method: Composition-based stats. Identities = 35/210 (16%), Positives = 77/210 (36%), Gaps = 28/210 (13%) Query: 7 FQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHD-----EKIKALEV 61 Q+ LY +L+ N ++ ++ N + E K L+ Sbjct: 857 LQQYLYKELENNENSGPNV---LMQLRKVCNHPFLFSTEMQLPSDESIIRVCGKFVMLDS 913 Query: 62 IIE--KANAAPIIVAYHFNSDLARLQ---------KAFPQGRTLDKDPC-TIQEWNEGKI 109 I+ +A +++ L+ L+ G TL +D ++Q +N Sbjct: 914 ILPKLRAAGHRVLIFSQMTRLLSLLEIFLSLRNMTYLRLDGTTLSEDRQNSLQLFNATNS 973 Query: 110 P--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFV 167 P + + G G+NLQ + ++ F W+ + +Q +R + G + V Sbjct: 974 PYFVFLLSTKAGGFGINLQ-SADTVILFDSDWNPQNDEQA-----QSRAHRIGQTKEVLT 1027 Query: 168 YYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + +T++E +++ K L++ + Sbjct: 1028 LRFVTPDTVEERIMKTAGIKLDKDALIIKS 1057 >gi|116191565|ref|XP_001221595.1| hypothetical protein CHGG_05500 [Chaetomium globosum CBS 148.51] gi|88181413|gb|EAQ88881.1| hypothetical protein CHGG_05500 [Chaetomium globosum CBS 148.51] Length = 982 Score = 90.0 bits (222), Expect = 2e-16, Method: Composition-based stats. Identities = 32/158 (20%), Positives = 57/158 (36%), Gaps = 21/158 (13%) Query: 52 HDEKIKALEVIIEKANAA----PIIVAYHFNSDLARLQKAFPQGR----------TLDKD 97 KI AL + + +V F S L+ L+ A + T Sbjct: 810 SSAKIVALINQLRELRRETPTIKSVVFSQFTSFLSLLEPALARANMHFVRLDGSMTQKAR 869 Query: 98 PCTIQEW-NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 ++E+ K +L + G GLNL + WW Q I+R+ Sbjct: 870 AAVLEEFKESKKFTILLLSLKAGGVGLNLT-SAKRVYMMDPWWSFAIEAQAIDRV----- 923 Query: 157 RQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 + G + V VY I ++++++ +L+ K + L Sbjct: 924 HRMGQEDEVKVYRFIVKDSVEQRMLKVQDRKKFLATSL 961 >gi|121712712|ref|XP_001273967.1| RSC complex subunit (Sth1), putative [Aspergillus clavatus NRRL 1] gi|119402120|gb|EAW12541.1| RSC complex subunit (Sth1), putative [Aspergillus clavatus NRRL 1] Length = 1379 Score = 90.0 bits (222), Expect = 2e-16, Method: Composition-based stats. Identities = 32/159 (20%), Positives = 62/159 (38%), Gaps = 20/159 (12%) Query: 55 KIKALEVIIE--KANAAPIIVAYHFNSD---------LARLQKAFPQGRTLDKDPCTI-Q 102 K + L+ I+ +A +++ + L L+ G T D + + Sbjct: 852 KFELLDRILPKFRATGHRVLMFFQMTQIMNIMEDFLRLRGLKYLRLDGSTKSDDRSDLLK 911 Query: 103 EWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 +N + G GLNLQ + ++ F W+ + Q R + G Sbjct: 912 LFNAPGSDYFCFLLSTRAGGLGLNLQT-ADTVIIFDSDWNPHQDLQA-----QDRAHRIG 965 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 K V + LI+ N+++E +L+R + K + ++ A K Sbjct: 966 QKNEVRILRLISSNSVEEKILERAQFKLDMDGKVIQAGK 1004 >gi|33086941|gb|AAP92713.1| Swi2/Snf2-related protein DDM1 [Arabidopsis arenosa] Length = 764 Score = 90.0 bits (222), Expect = 2e-16, Method: Composition-based stats. Identities = 24/142 (16%), Positives = 58/142 (40%), Gaps = 18/142 (12%) Query: 66 ANAAPIIVAYHFNSDLARLQKAFPQGRT----------LDKDPCTIQEWNEGK--IPLLF 113 AN +++ + L + F + LD+ I+++++ K + Sbjct: 538 ANNHKVLIFSQWTKLLDIMDYYFSEKGFEVCRIDGQVKLDERRRQIKDFSDEKSSCSIFL 597 Query: 114 AHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQ 173 + G G+NL + + + W+ + Q ++R + G + V VY L Sbjct: 598 LSTRAGGLGINLT-AADTCILYDSDWNPQMDLQAMDRC-----HRIGQTKPVHVYRLSTA 651 Query: 174 NTIDELVLQRLRTKSTIQDLLL 195 +++ VL+R +K ++ +++ Sbjct: 652 QSVETRVLKRAYSKLKLEHVVI 673 >gi|219118975|ref|XP_002180254.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1] gi|217408511|gb|EEC48445.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1] Length = 126 Score = 90.0 bits (222), Expect = 2e-16, Method: Composition-based stats. Identities = 22/98 (22%), Positives = 43/98 (43%), Gaps = 7/98 (7%) Query: 94 LDKDPCTIQEWNE-GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIG 152 +D+ + +N K+ S G G+NL G + ++F+ W+ Q Sbjct: 35 VDRRQRLMDRFNNDPKLFCFILSTRSGGLGINLT-GADSVIFYDSDWNPAMDAQA----- 88 Query: 153 VTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 R + G R V +Y + ++TI+E +L + + K + Sbjct: 89 QDRAHRIGQTRDVHIYRFVTEHTIEENILVKAQQKRNL 126 >gi|328867363|gb|EGG15746.1| SNF2-related domain-containing protein [Dictyostelium fasciculatum] Length = 1933 Score = 90.0 bits (222), Expect = 2e-16, Method: Composition-based stats. Identities = 45/209 (21%), Positives = 82/209 (39%), Gaps = 23/209 (11%) Query: 3 QYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGA-VYYDEEKHWKEVHDEKIKALEV 61 QY K E+ ++ + +A K +L + D++K V EK +LE Sbjct: 1644 QYQKIVDEMVQKRLPIDVHSIENAPKLTSLRELLWECGIGKDDDKENGLVKKEK-DSLEN 1702 Query: 62 IIEKANAAPIIVAYHFNSDLARLQK-------------AFPQGRTLDKDPCTIQEWN-EG 107 + E + ++ + L ++ G K + +N + Sbjct: 1703 L-EISTQHRCLIFAQTKAMLDCVESDLLKKILPSVTYLRMDGGTEQMKRQTIVNRFNADP 1761 Query: 108 KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFV 167 I LL G GLNL G + ++F W+ + Q ++R + G K+ V V Sbjct: 1762 TIDLLLLTTTVGGLGLNLT-GADTVIFLEHDWNPMKDLQAMDR-----AHRIGQKKVVNV 1815 Query: 168 YYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 Y LI Q T++E ++ + K I + ++N Sbjct: 1816 YRLITQGTLEEKIMGLQKFKLNIANTIVN 1844 >gi|308512703|gb|ADO33005.1| cockayne syndrome protein [Biston betularia] Length = 954 Score = 90.0 bits (222), Expect = 2e-16, Method: Composition-based stats. Identities = 32/167 (19%), Positives = 64/167 (38%), Gaps = 19/167 (11%) Query: 42 YDEEKHWKEVHDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKA----------FP 89 DEEK K+ + +++ + ++ + L L++ Sbjct: 497 IDEEKFGHWKRSGKMTVVNSLLKIWQKQGHRALIFSQSRAMLCVLEQYLQSQNFKYLKMD 556 Query: 90 QGRTLDKDPCTIQEWNE-GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMI 148 + + I+ +NE + + + G G+NL G + ++ + W+ Q Sbjct: 557 GSVLVSQRQSLIKTFNENAEYLVFLSTTRVGGLGVNLT-GADRVIVYDPDWNPATDDQAK 615 Query: 149 ERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 ER + G +R V VY L+ TI+E + QR K + + +L Sbjct: 616 ERAW-----RIGQERTVTVYRLLCAGTIEEKIYQRQIFKHFLSNKIL 657 >gi|242025432|ref|XP_002433128.1| helicase, putative [Pediculus humanus corporis] gi|212518669|gb|EEB20390.1| helicase, putative [Pediculus humanus corporis] Length = 942 Score = 90.0 bits (222), Expect = 2e-16, Method: Composition-based stats. Identities = 26/144 (18%), Positives = 59/144 (40%), Gaps = 18/144 (12%) Query: 65 KANAAPIIVAYHFNSDLARL---------QKAFPQGRTLDKDPC-TIQEWNEG--KIPLL 112 + + +++ L L + G T +D I E+N + + Sbjct: 380 QDQDSRVLIFSQMTRMLDILEDYCFWKGYKYCRLDGNTSHEDRQRQINEYNAPNSEKFIF 439 Query: 113 FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIA 172 + G G+NL ++++ + W+ + Q ++R + G + V V+ LI Sbjct: 440 MLSTRAGGLGINL-ATADVVILYDSDWNPQMDLQAMDR-----AHRIGQLKEVRVFRLIT 493 Query: 173 QNTIDELVLQRLRTKSTIQDLLLN 196 +NT++E +++R K + L++ Sbjct: 494 ENTVEEKIVERAEVKLRLDKLVIQ 517 >gi|194228023|ref|XP_001488364.2| PREDICTED: excision repair cross-complementing rodent repair deficiency, complementation group 6-like [Equus caballus] Length = 1230 Score = 90.0 bits (222), Expect = 2e-16, Method: Composition-based stats. Identities = 24/152 (15%), Positives = 49/152 (32%), Gaps = 20/152 (13%) Query: 53 DEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQKAFPQGRTL------------DKDP 98 K+ L ++++ +V L +++ +++ Sbjct: 447 SGKMIFLMDLLQRLRDEGHQTLVFSQSRQILNIIERLLKNRHFKILRIDGTITHLVEREK 506 Query: 99 CTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQ 158 + G GL L +V F W+ Q ++R+ + Sbjct: 507 RINLFQQNKDYSVFLLTTQVGGVGLTLT-AATRVVIFDPSWNPATDAQAVDRV-----YR 560 Query: 159 AGFKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 G K V VY LI T++E + +R K ++ Sbjct: 561 IGQKENVVVYRLITCGTVEEKIYRRQVFKDSL 592 >gi|58262112|ref|XP_568466.1| hypothetical protein CNM01240 [Cryptococcus neoformans var. neoformans JEC21] gi|134118355|ref|XP_772191.1| hypothetical protein CNBM1100 [Cryptococcus neoformans var. neoformans B-3501A] gi|50254799|gb|EAL17544.1| hypothetical protein CNBM1100 [Cryptococcus neoformans var. neoformans B-3501A] gi|57230639|gb|AAW46949.1| conserved hypothetical protein [Cryptococcus neoformans var. neoformans JEC21] Length = 842 Score = 90.0 bits (222), Expect = 2e-16, Method: Composition-based stats. Identities = 30/164 (18%), Positives = 59/164 (35%), Gaps = 26/164 (15%) Query: 52 HDEKIKALEVIIEK-----ANAAPIIVAYHFNSDLAR---------LQKAFPQGRTLDKD 97 KI+ L ++ + N IV F S L ++ G + Sbjct: 635 TSAKIRMLLKLLSEIDEKSGNKEKTIVFSQFTSFLDLVEPFLKENNIKYVRYDGSMRNDH 694 Query: 98 PCT----IQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGV 153 I++ + K ++ + GLNL N ++ LWW+ Q +R Sbjct: 695 RQVSLAKIRD--DPKTRVILISFKAGSTGLNLTC-CNNVILMDLWWNPALEDQAFDR--- 748 Query: 154 TRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + G K V ++ L + T+++ +L +K + + L+ Sbjct: 749 --AHRLGQKLDVNIWKLTIEETVEDRILILQNSKRELANAALSG 790 >gi|320582098|gb|EFW96316.1| helicase of the Snf2/Rad54 family [Pichia angusta DL-1] Length = 972 Score = 90.0 bits (222), Expect = 2e-16, Method: Composition-based stats. Identities = 33/165 (20%), Positives = 70/165 (42%), Gaps = 20/165 (12%) Query: 34 QLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLA---------RL 84 QLA+ D E +++ K+ L + + ++V F L ++ Sbjct: 791 QLAS--FQLDNEAYYQSGKVRKMLQLINKVTE-KGEKVLVFSLFTQVLDILEMVLSLNQI 847 Query: 85 QKAFPQGRTLDKDPCTI--QEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLE 142 + G+T + I + + +P++ + G G+NL N+++ F ++ Sbjct: 848 KFLRLDGQTSVDERQGIIDKFYEADDVPVMLLSTKAGGFGINLVCANNVII-FDQSFNPH 906 Query: 143 EHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTK 187 + +Q +R + G + V VY +I ++TI+E +LQ + K Sbjct: 907 DDKQAEDR-----AHRVGQTKEVNVYRIICRDTIEENILQLAQNK 946 >gi|281200598|gb|EFA74816.1| chromo domain-containing protein [Polysphondylium pallidum PN500] Length = 2720 Score = 90.0 bits (222), Expect = 2e-16, Method: Composition-based stats. Identities = 26/167 (15%), Positives = 59/167 (35%), Gaps = 20/167 (11%) Query: 52 HDEKIKALEVIIEK--ANAAPIIVAYH----------FNSDLARLQKAFPQGRTLDKDPC 99 K+ ++ ++++ A +++ + L + + Sbjct: 1132 SSSKLVLVDKLLQRLKAEGHKVLIFSQMVESLNILEDYLHYREYLYERLDGSVKSEVRQA 1191 Query: 100 TIQEW--NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 +I+ + E + S G G+NL + ++ F W+ + Q R Sbjct: 1192 SIERFMDKESDRFVFLLSTRSGGVGINLT-SADTVILFDSDWNPQSDLQAQARC-----H 1245 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIH 204 + G V VY LI +NT ++ + + K + ++LN K + Sbjct: 1246 RIGQTSNVKVYRLITRNTYEQYLFEVATKKLLLDHIVLNNAKNNPMK 1292 >gi|317138645|ref|XP_001817051.2| chromatin structure-remodeling complex subunit snf2 [Aspergillus oryzae RIB40] Length = 1422 Score = 90.0 bits (222), Expect = 2e-16, Method: Composition-based stats. Identities = 31/162 (19%), Positives = 63/162 (38%), Gaps = 20/162 (12%) Query: 52 HDEKIKALEVIIE--KANAAPIIVAYHFNSD---------LARLQKAFPQGRTLDKDPCT 100 K + L+ I+ +A +++ + L ++ G T D Sbjct: 860 TSGKFELLDRILPKFRATGHRVLMFFQMTQIMNIMEDFLRLRGMKYLRLDGSTKSDDRSD 919 Query: 101 I-QEWN--EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 + + +N + + G GLNLQ + ++ F W+ + Q R Sbjct: 920 LLKLFNAENSEYFCFLLSTRAGGLGLNLQ-SADTVIIFDSDWNPHQDLQA-----QDRAH 973 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 + G K V + LI+ N+++E +L+R + K + ++ A K Sbjct: 974 RIGQKNEVRILRLISSNSVEEKILERAQFKLDMDGKVIQAGK 1015 >gi|301780254|ref|XP_002925544.1| PREDICTED: DNA excision repair protein ERCC-6-like [Ailuropoda melanoleuca] Length = 1240 Score = 90.0 bits (222), Expect = 2e-16, Method: Composition-based stats. Identities = 31/178 (17%), Positives = 59/178 (33%), Gaps = 27/178 (15%) Query: 34 QLANGAVYYDEEKHWKEVHDE-------KIKALEVIIEKA--NAAPIIVAYHFNSDLARL 84 Q AN + H ++ D+ K+ L ++++ +V L + Sbjct: 435 QGANEGEDASDVDHIDQITDDTLMEESGKMIFLIELLKRLRDEGHQTLVFSQSRQILNII 494 Query: 85 Q-----KAFPQGRTLDKDPCTIQE-------WNEGKIPLLFAHPASCGHGLNLQYGGNIL 132 + + F R ++ + G GL L + Sbjct: 495 EHLLKNRHFKILRIDGTVTHLVEREKRINLFQQNKDYSVFLLTTQVGGVGLTLT-AATRV 553 Query: 133 VFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 V F W+ Q ++R+ + G K V VY LI T++E + +R K ++ Sbjct: 554 VIFDPSWNPATDAQAVDRV-----YRIGQKENVVVYRLITCGTVEEKIYRRQVFKDSL 606 >gi|124024526|ref|YP_001018833.1| SNF2 family DNA/RNA helicase [Prochlorococcus marinus str. MIT 9303] gi|123964812|gb|ABM79568.1| Superfamily II DNA/RNA helicases, SNF2 family [Prochlorococcus marinus str. MIT 9303] Length = 1099 Score = 90.0 bits (222), Expect = 2e-16, Method: Composition-based stats. Identities = 34/189 (17%), Positives = 67/189 (35%), Gaps = 26/189 (13%) Query: 26 ASKTVKCLQLANGAVYYDEEKHWKEVH---DEKIKALEVIIEKAN--AAPIIVAYHFNSD 80 + Q+ N +EK + K+ LE I+E+ ++ F ++ Sbjct: 894 LGLLTRLKQICNHPALALKEKTVAKGFMDRSAKLLRLEEILEEVIEAGDRALLFTQF-AE 952 Query: 81 LARLQKAFPQGR------------TLDKDPCTIQEWNEG--KIPLLFAHPASCGHGLNLQ 126 L KA+ Q R + + + + E L + G GLNL Sbjct: 953 WGHLLKAYLQQRWRFEVPFLHGSTSKTERQAMVDRFQEDPRGPQLFLLSLKAGGVGLNLT 1012 Query: 127 YGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRT 186 + + WW+ Q +R + G V V+ I +++E + + +R Sbjct: 1013 RASH-VFHVDRWWNPAVENQATDR-----AYRIGQTNRVMVHKFITSGSVEEKIDRMIRE 1066 Query: 187 KSTIQDLLL 195 KS + + ++ Sbjct: 1067 KSRLAEDII 1075 >gi|123434210|ref|XP_001308765.1| SNF2 family N-terminal domain containing protein [Trichomonas vaginalis G3] gi|121890461|gb|EAX95835.1| SNF2 family N-terminal domain containing protein [Trichomonas vaginalis G3] Length = 1454 Score = 90.0 bits (222), Expect = 2e-16, Method: Composition-based stats. Identities = 24/149 (16%), Positives = 47/149 (31%), Gaps = 18/149 (12%) Query: 68 AAPIIVAYHFNSDLARLQ----------KAFPQGRTLDKDPCTIQEWNEGKIP--LLFAH 115 +++ L L+ + + I +N+ K + Sbjct: 543 GHRVLIFSQMTKMLDILEDYLRYKRYNYERIDGSVKTEDRQQAIDRFNDEKSNSFIFLLC 602 Query: 116 PASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNT 175 + G G+NL + +V + W+ + Q R + G K+ V Y I NT Sbjct: 603 TRAGGLGINL-VSADTVVIYDSDWNPQNDIQATARC-----HRIGQKKKVTAYRFITANT 656 Query: 176 IDELVLQRLRTKSTIQDLLLNALKKETIH 204 + + K + +L K + H Sbjct: 657 YERKMFDIASLKKGLDTAVLETNKGDWKH 685 >gi|123432105|ref|XP_001308354.1| SNF2 family N-terminal domain containing protein [Trichomonas vaginalis G3] gi|121890030|gb|EAX95424.1| SNF2 family N-terminal domain containing protein [Trichomonas vaginalis G3] Length = 1612 Score = 90.0 bits (222), Expect = 2e-16, Method: Composition-based stats. Identities = 36/201 (17%), Positives = 66/201 (32%), Gaps = 33/201 (16%) Query: 5 HKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYD-------EEKHWKEVHDEKIK 57 K RE + I+ ++ + + D +E H + + +K Sbjct: 531 EKMIREKLSQASEDEIQ-------LQALIESSGKMILLDKLLPKLHQEGHKVLIFSQMVK 583 Query: 58 ALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEW-NEGKIPLLFAHP 116 L IIE I D R+ P+ I + N + Sbjct: 584 VL-DIIEDYLIKKDI-------DCERIDGNVPEPE----RNAAIDRFVNNENCYIFLLCT 631 Query: 117 ASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTI 176 + G G+NL + ++ + W+ + Q R + G + V VY L+ + T Sbjct: 632 RAGGVGINLT-AADTVIIYDSDWNPQNDIQAQSRC-----HRIGQTQKVKVYRLVTRGTY 685 Query: 177 DELVLQRLRTKSTIQDLLLNA 197 + +L R K + LL+ Sbjct: 686 ELEMLDRASKKLGLDHALLDG 706 >gi|328855756|gb|EGG04881.1| hypothetical protein MELLADRAFT_116969 [Melampsora larici-populina 98AG31] Length = 2104 Score = 90.0 bits (222), Expect = 2e-16, Method: Composition-based stats. Identities = 29/142 (20%), Positives = 53/142 (37%), Gaps = 20/142 (14%) Query: 69 APIIVAYHFNSDLARLQK-------------AFPQGRTLDKDPCTIQEWN-EGKIPLLFA 114 +++ L ++ K +Q +N + I L Sbjct: 1896 HRVLIFCQMREMLDIIEHDLFKNHMPTVTFMRMDGTTEASKRHDIVQTFNADPSIDCLLL 1955 Query: 115 HPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQN 174 G GLNL G + ++F W+ + Q ++R + G K+ V VY LI + Sbjct: 1956 TTHVGGLGLNLT-GADTVIFVEHDWNPMKDLQAMDR-----AHRLGQKKVVNVYRLITRA 2009 Query: 175 TIDELVLQRLRTKSTIQDLLLN 196 T++E ++ R K I ++N Sbjct: 2010 TLEEKIMGLQRFKLNIATSIVN 2031 >gi|302421718|ref|XP_003008689.1| chromodomain-helicase-DNA-binding protein [Verticillium albo-atrum VaMs.102] gi|261351835|gb|EEY14263.1| chromodomain-helicase-DNA-binding protein [Verticillium albo-atrum VaMs.102] Length = 1710 Score = 90.0 bits (222), Expect = 2e-16, Method: Composition-based stats. Identities = 29/165 (17%), Positives = 65/165 (39%), Gaps = 22/165 (13%) Query: 52 HDEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCT--------- 100 K+ LE+++ K +++ F + L + + + GR D Sbjct: 1119 ASAKLLLLEIMLPKLKERGHRVLLFSQFLNQLD-IVEDYLTGRGYDFRRLDGSISSLEKQ 1177 Query: 101 --IQEWNEGKIPLL--FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 I +N P+ + G G+NL + ++ ++ + Q + R Sbjct: 1178 RRIDAFNAPDSPVFAFLLSTRAGGVGINL-ATADTVIILDPDFNPHQDLQALSR-----A 1231 Query: 157 RQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 + G K V + L+ +N+++E ++Q R K + +L+ ++ E Sbjct: 1232 HRIGQKNKVLCFQLMTKNSVEEKIMQIGRKKMALDHVLIESMDNE 1276 >gi|170584903|ref|XP_001897230.1| Type III restriction enzyme, res subunit family protein [Brugia malayi] gi|158595354|gb|EDP33914.1| Type III restriction enzyme, res subunit family protein [Brugia malayi] Length = 1595 Score = 90.0 bits (222), Expect = 2e-16, Method: Composition-based stats. Identities = 35/221 (15%), Positives = 82/221 (37%), Gaps = 37/221 (16%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE- 60 K Y + + + + G N + KC N + +E D +++ L Sbjct: 677 KNYKELSKGVKGSINGF----VNLVMELKKC---CNHSSLVRSYDQAEEGADARLQQLLK 729 Query: 61 -----VIIEKA------NAAPIIVAYHFNSDLARLQ-----KAFPQGRTLDKDPCTIQE- 103 ++++K +++ L +Q + FP R +++ Sbjct: 730 SSGKLILLDKLLCRLQETGHRVLIFSQMVMMLDIMQEYLQLRRFPSQRLDGSMRSDLRKA 789 Query: 104 ----WNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 +N P + G G+NL + ++ F W+ + Q + R Sbjct: 790 ALDHFNAPNSPDFCFLLSTRAGGLGINL-ATADTVIIFDSDWNPQNDLQAMSR-----AH 843 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNAL 198 + G K+ V +Y L+ + +++E +++R + K + L++ + Sbjct: 844 RIGQKKQVNIYRLVTKASVEEEIVERAKRKLVLDHLIIQRM 884 >gi|213407960|ref|XP_002174751.1| DNA repair protein RAD16 [Schizosaccharomyces japonicus yFS275] gi|212002798|gb|EEB08458.1| DNA repair protein RAD16 [Schizosaccharomyces japonicus yFS275] Length = 930 Score = 90.0 bits (222), Expect = 2e-16, Method: Composition-based stats. Identities = 35/168 (20%), Positives = 65/168 (38%), Gaps = 23/168 (13%) Query: 44 EEKHWKEVHDEKIKALEVIIEKANAA----PIIVAYHFNSDLA----RLQKA------FP 89 + +W+ KI+AL + + IV F S L RL+KA Sbjct: 751 DMDNWR--SSTKIEALVEELYRLRKKDRTIKSIVFSQFTSMLDLVHWRLRKAGFNCVKLE 808 Query: 90 QGRTLDKDPCTIQEW-NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMI 148 G T TIQ + + I + + G LNL + + WW+ Q + Sbjct: 809 GGMTPKARDATIQAFCTDINITVFLVSLKAGGIALNLTE-ASQVFMLDPWWNGAVQWQAM 867 Query: 149 ERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 +RI + G +R + + L +N+I+ +++ K+ + ++ Sbjct: 868 DRI-----HRIGQRRPIRITTLCIENSIESKIIELQEKKAQMIHATID 910 >gi|320038964|gb|EFW20899.1| DNA repair and recombination protein RAD26 [Coccidioides posadasii str. Silveira] Length = 961 Score = 90.0 bits (222), Expect = 2e-16, Method: Composition-based stats. Identities = 25/104 (24%), Positives = 45/104 (43%), Gaps = 9/104 (8%) Query: 96 KDPCTIQEWN---EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIG 152 K + ++N + G GLNL G + LV F + W+ Q + RI Sbjct: 699 KRQFLVDDFNRSSSKSCFAFLLSAKAGGIGLNLT-GASRLVLFDVDWNPATDIQAMARI- 756 Query: 153 VTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + G KR +Y ++ + ++E + QR TK + D +++ Sbjct: 757 ----HRDGQKRHCHIYRMLLRGGLEEKIWQRQVTKLGLSDSVMD 796 >gi|309363526|emb|CAP26346.2| hypothetical protein CBG_06016 [Caenorhabditis briggsae AF16] Length = 1380 Score = 90.0 bits (222), Expect = 2e-16, Method: Composition-based stats. Identities = 34/159 (21%), Positives = 65/159 (40%), Gaps = 20/159 (12%) Query: 55 KIKALEVIIEK--ANAAPIIVAYHFNSDLARLQ---------KAFPQGRTL-DKDPCTIQ 102 K++ L+ I+ K A +++ + + + + G T D+ ++ Sbjct: 893 KLELLDRILPKLKATGHRVLMFFQMTTMMTIFEDYLNFRQYTYLRLDGSTKPDERGELLK 952 Query: 103 EWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 +N K L + G GLNLQ + ++ F W+ + Q R + G Sbjct: 953 MFNAPDSKYFLFMLSTRAGGLGLNLQT-ADTVIIFDSDWNPHQDMQA-----QDRAHRIG 1006 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 K+ V V LI N+++E +L R K + + ++ A K Sbjct: 1007 QKKEVRVLRLITANSVEEKILAAARYKLNVDEKVIQAGK 1045 >gi|226287268|gb|EEH42781.1| DNA excision repair protein (Rad26L) [Paracoccidioides brasiliensis Pb18] Length = 1025 Score = 90.0 bits (222), Expect = 2e-16, Method: Composition-based stats. Identities = 31/137 (22%), Positives = 48/137 (35%), Gaps = 17/137 (12%) Query: 67 NAAPIIVAYHFNSDLARLQKAFPQGR----------TLDKDPCTIQEWN-EGKIPLLFAH 115 N ++V H L LQ F T D + +N + + + Sbjct: 627 NGDKVLVFSHNVRLLKMLQMLFKHTSYNVSYLDGSMTYDNRAKAVDNFNADPREFVFLIS 686 Query: 116 PASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNT 175 + G GLN+ N +V W+ Q R + G R V V+ LI+ T Sbjct: 687 TRAGGIGLNIT-SANKVVVVDPNWNPAFDLQA-----QDRAYRIGQSRDVEVFRLISAGT 740 Query: 176 IDELVLQRLRTKSTIQD 192 I+E+V R K + Sbjct: 741 IEEIVYARQIYKQQQAN 757 >gi|154313972|ref|XP_001556311.1| hypothetical protein BC1G_04929 [Botryotinia fuckeliana B05.10] gi|150849075|gb|EDN24268.1| hypothetical protein BC1G_04929 [Botryotinia fuckeliana B05.10] Length = 1065 Score = 90.0 bits (222), Expect = 2e-16, Method: Composition-based stats. Identities = 32/167 (19%), Positives = 63/167 (37%), Gaps = 18/167 (10%) Query: 42 YDEEKHWKEVHDEKIKALEVII-EKANAAPIIVAYHFNSDLARL-----QKAFPQGRTLD 95 ++ + + KI L I+ ++A IV F S L + QK + R Sbjct: 816 DEDAELSRIAASTKITHLMKILGKEAAQHKFIVFSQFTSMLDLVEPFLRQKGYKYTRYDG 875 Query: 96 KDPCTIQE------WNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIE 149 ++E N+ +L GLNL +++ +W+ +Q I+ Sbjct: 876 GMKNDLREASLDRLRNDENCRVLLCSLKCGSLGLNLTAATRVVIL-EPFWNPFVEEQAID 934 Query: 150 RIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 R+ + K V VY + ++T++E +L K + + + Sbjct: 935 RV-----HRLTQKIDVIVYKITIKDTVEERILLLQEKKRELANQTIE 976 >gi|146091759|ref|XP_001470113.1| DNA repair protein [Leishmania infantum] gi|134084907|emb|CAM69305.1| putative DNA repair protein [Leishmania infantum JPCM5] Length = 736 Score = 90.0 bits (222), Expect = 2e-16, Method: Composition-based stats. Identities = 33/170 (19%), Positives = 67/170 (39%), Gaps = 17/170 (10%) Query: 39 AVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRT----- 93 A Y + E ++++ + + A +I+ F S + + A + Sbjct: 493 AQYKNNEFELSTKLRMVLRSIHDMQKNHPADKMIIFSQFTSFMDVISVALDRYNIAFLRI 552 Query: 94 -----LDKDPCTIQEWNEGK-IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQM 147 L I+++ + I ++ A + G GLNL +++V WW+ +Q Sbjct: 553 DGTMSLSNRNAVIRQFQTSEHIKIVLASKTATGVGLNLTAANHVVV-VDPWWNPAIEEQA 611 Query: 148 IERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + R + G K+ V+V I +TI++ + + K D +L A Sbjct: 612 VHRC-----YRIGQKKPVYVTRFIIADTIEQYCYEICQRKKEFGDAVLRA 656 >gi|83764905|dbj|BAE55049.1| unnamed protein product [Aspergillus oryzae] Length = 1417 Score = 90.0 bits (222), Expect = 2e-16, Method: Composition-based stats. Identities = 31/162 (19%), Positives = 63/162 (38%), Gaps = 20/162 (12%) Query: 52 HDEKIKALEVIIE--KANAAPIIVAYHFNSD---------LARLQKAFPQGRTLDKDPCT 100 K + L+ I+ +A +++ + L ++ G T D Sbjct: 855 TSGKFELLDRILPKFRATGHRVLMFFQMTQIMNIMEDFLRLRGMKYLRLDGSTKSDDRSD 914 Query: 101 I-QEWN--EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 + + +N + + G GLNLQ + ++ F W+ + Q R Sbjct: 915 LLKLFNAENSEYFCFLLSTRAGGLGLNLQ-SADTVIIFDSDWNPHQDLQA-----QDRAH 968 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 + G K V + LI+ N+++E +L+R + K + ++ A K Sbjct: 969 RIGQKNEVRILRLISSNSVEEKILERAQFKLDMDGKVIQAGK 1010 >gi|312214231|emb|CBX94225.1| hypothetical protein [Leptosphaeria maculans] Length = 938 Score = 90.0 bits (222), Expect = 2e-16, Method: Composition-based stats. Identities = 26/161 (16%), Positives = 60/161 (37%), Gaps = 22/161 (13%) Query: 52 HDEKIKALEVIIEKAN---AAPIIVAYHFNSDLARLQK----------AFPQGRTLDKDP 98 K++ L+ ++ + + I++ ++ + L +++ K Sbjct: 625 SSTKLRLLDSLVHRIHTTTDEKIVIVSNYTTTLDMIERLLTSLSYTYLRLDGSTPAAKRQ 684 Query: 99 CTIQEWNEGKIP---LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTR 155 + ++N S G G+NL G + +V F W+ Q + RI Sbjct: 685 PLVNKFNTSSKSTAFAFLLSAKSGGVGINL-IGASRIVLFECDWNPATDLQAMARI---- 739 Query: 156 QRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + G K +Y + + +DE + QR +K + +++ Sbjct: 740 -HREGQKLPCKIYRFLIKGGLDEKIYQRQVSKMGLAGAVVD 779 >gi|225850307|ref|YP_002730541.1| helicase, Snf2 family [Persephonella marina EX-H1] gi|225646235|gb|ACO04421.1| helicase, Snf2 family [Persephonella marina EX-H1] Length = 562 Score = 90.0 bits (222), Expect = 2e-16, Method: Composition-based stats. Identities = 39/188 (20%), Positives = 73/188 (38%), Gaps = 30/188 (15%) Query: 29 TVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKA--NAAPIIVAYHF-NSDLARLQ 85 K Q+ N K K+ L II + N +IV +F + R+ Sbjct: 365 IQKLRQVCNFP--------SKGFDSPKMARLREIIIELIKNDEKVIVFTNFVKYGIERIV 416 Query: 86 KAFPQ------------GRTLDKDPCTIQEWNEGKIP-LLFAHPASCGHGLNLQYGGNIL 132 G ++ ++++ E K + S G GL L + Sbjct: 417 NNLSYYINPDYIVQYHGGMRPEEKIKAVKDFKEKKNKYVFIGTITSAGEGLTLTES-SYA 475 Query: 133 VFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQD 192 +FF L W+ + Q +RI + G K + +Y + +NT++E +LQ+L K + Sbjct: 476 IFFDLHWNPAKIWQAEDRI-----HRIGQKNKINIYNFVMRNTVEERILQKLEEKRAMIQ 530 Query: 193 LLLNALKK 200 +++ ++K Sbjct: 531 NVIDGIEK 538 >gi|255071819|ref|XP_002499584.1| SNF2 super family [Micromonas sp. RCC299] gi|226514846|gb|ACO60842.1| SNF2 super family [Micromonas sp. RCC299] Length = 1271 Score = 90.0 bits (222), Expect = 2e-16, Method: Composition-based stats. Identities = 40/213 (18%), Positives = 75/213 (35%), Gaps = 25/213 (11%) Query: 4 YHKFQRELYCDLQGENIEAFNSASKTVKC-----LQLANGAVYYDEEKHWKEVHDEKIKA 58 Y + + + +G+ N+A + K L L++ Y K + Sbjct: 766 YRQVVKGTVTNTEGKVRVLQNTAMQLRKVCNHPYLFLSDDLFYQPSGPEEILRASGKFEI 825 Query: 59 LEVIIEKAN--AAPIIVAYHFNSDLARL---------QKAFPQGRT-LDKDPCTIQEWNE 106 L+ I+ K +++ L + G T D + ++N Sbjct: 826 LDRILPKLKRSGHRVLLFSQMVKCLDIIGDYLDWRKYTYLRLDGSTGTDARADLLDKFNA 885 Query: 107 GKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA 164 P L + G GLNLQ + ++ F W+ + Q +R + G KR Sbjct: 886 PDSPYFLFMLSTRAGGMGLNLQT-ADTVIIFDSDWNPQMDAQAEDR-----AHRIGQKRR 939 Query: 165 VFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 V + ++ TI+E +L++ K I + A Sbjct: 940 VKILTMVCDGTIEEDILRKANEKRAIDHKAIQA 972 >gi|156841074|ref|XP_001643913.1| hypothetical protein Kpol_1067p28 [Vanderwaltozyma polyspora DSM 70294] gi|156114542|gb|EDO16055.1| hypothetical protein Kpol_1067p28 [Vanderwaltozyma polyspora DSM 70294] Length = 1053 Score = 90.0 bits (222), Expect = 2e-16, Method: Composition-based stats. Identities = 31/148 (20%), Positives = 53/148 (35%), Gaps = 20/148 (13%) Query: 56 IKALEVIIEKANAAPIIVAYHFNS-DLARLQKAFPQGRT-LDKDPCTIQEWNEGKIPLLF 113 + LE F DL + G T + + ++N + Sbjct: 658 LDVLED------------FISFKDEDLKGFKYLRMDGTTNISHRQSLVDKFNNENYDVFL 705 Query: 114 AHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQ 173 G G+NL G + ++ F W+ Q ER + G KR V +Y L+ Sbjct: 706 LTTRVGGLGVNLT-GADRIIIFDPDWNPSTDMQARERAW-----RIGQKREVSIYRLLIT 759 Query: 174 NTIDELVLQRLRTKSTIQDLLLNALKKE 201 TI+E + R K + + +L K++ Sbjct: 760 GTIEEKIYHRQLFKQFLTNKILTDPKQK 787 >gi|297797715|ref|XP_002866742.1| hypothetical protein ARALYDRAFT_496925 [Arabidopsis lyrata subsp. lyrata] gi|297312577|gb|EFH43001.1| hypothetical protein ARALYDRAFT_496925 [Arabidopsis lyrata subsp. lyrata] Length = 764 Score = 89.6 bits (221), Expect = 2e-16, Method: Composition-based stats. Identities = 24/142 (16%), Positives = 58/142 (40%), Gaps = 18/142 (12%) Query: 66 ANAAPIIVAYHFNSDLARLQKAFPQGRT----------LDKDPCTIQEWNEGK--IPLLF 113 AN +++ + L + F + LD+ I+++++ K + Sbjct: 538 ANNHKVLIFSQWTKLLDIMDYYFSEKGFEVCRIDGNVKLDERRRQIKDFSDEKSSCSIFL 597 Query: 114 AHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQ 173 + G G+NL + + + W+ + Q ++R + G + V VY L Sbjct: 598 LSTRAGGLGINLT-AADTCILYDSDWNPQMDLQAMDRC-----HRIGQTKPVHVYRLSTA 651 Query: 174 NTIDELVLQRLRTKSTIQDLLL 195 +++ VL+R +K ++ +++ Sbjct: 652 QSVETRVLKRAYSKLKLEHVVI 673 >gi|242089493|ref|XP_002440579.1| hypothetical protein SORBIDRAFT_09g003430 [Sorghum bicolor] gi|241945864|gb|EES19009.1| hypothetical protein SORBIDRAFT_09g003430 [Sorghum bicolor] Length = 1127 Score = 89.6 bits (221), Expect = 2e-16, Method: Composition-based stats. Identities = 33/189 (17%), Positives = 71/189 (37%), Gaps = 25/189 (13%) Query: 28 KTVKCLQLANGAVYYDEE-----KHWKEVHDEKIKALEVIIEKAN--AAPIIVAYHFNSD 80 +++ + N + E + K + L+ ++ K +++ Sbjct: 715 LSMQLRKCCNHPYLFVEHYNMYQREEIVRASGKFELLDRLLPKLQRAGHRVLLFSQMTKL 774 Query: 81 LARL---------QKAFPQGRTL-DKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYG 128 L L + G T ++ + ++N+ + + G GLNLQ Sbjct: 775 LDVLEVYLQMYNFKYMRLDGSTKTEERGRLLADFNKKDSEYFMFLLSTRAGGLGLNLQT- 833 Query: 129 GNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKS 188 + ++ F W+ + QQ +R + G K V V+ L++ +I+E +L R + K Sbjct: 834 ADTVIIFDSDWNPQMDQQAEDR-----AHRIGQKNEVRVFVLVSVGSIEEEILDRAKQKM 888 Query: 189 TIQDLLLNA 197 I ++ A Sbjct: 889 GIDAKVIQA 897 >gi|196005243|ref|XP_002112488.1| hypothetical protein TRIADDRAFT_25002 [Trichoplax adhaerens] gi|190584529|gb|EDV24598.1| hypothetical protein TRIADDRAFT_25002 [Trichoplax adhaerens] Length = 807 Score = 89.6 bits (221), Expect = 2e-16, Method: Composition-based stats. Identities = 22/103 (21%), Positives = 47/103 (45%), Gaps = 9/103 (8%) Query: 97 DPCTIQEWNE---GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGV 153 I ++N + + + G+NL + +V F + W+ Q I Sbjct: 627 RQRYIDKFNNSNSYRCRVFLISTRAGSLGINLT-AASRVVLFDVGWNPSYDMQAI----- 680 Query: 154 TRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 R + G K+ V+VY L+A+ T+++ + +R TK ++ +++ Sbjct: 681 FRAYRFGQKKTVYVYRLVAKGTMEQKIYERQVTKQSLAYRVID 723 >gi|238495805|ref|XP_002379138.1| DNA excision repair protein Rad16, putative [Aspergillus flavus NRRL3357] gi|317147580|ref|XP_001822233.2| DNA excision repair protein Rad16 [Aspergillus oryzae RIB40] gi|220694018|gb|EED50362.1| DNA excision repair protein Rad16, putative [Aspergillus flavus NRRL3357] Length = 958 Score = 89.6 bits (221), Expect = 2e-16, Method: Composition-based stats. Identities = 30/168 (17%), Positives = 60/168 (35%), Gaps = 21/168 (12%) Query: 51 VHDEKIKALE----VIIEKANAAPIIVAYHFNSDLA----RLQKAFPQGRTLD------K 96 KI+ L + K IV F S L RL++A LD + Sbjct: 782 TSSTKIEMLVYELYKLRSKKQTHKSIVFSQFTSMLQLVEWRLRRAGFNTVMLDGTMTPAQ 841 Query: 97 DPCTIQEW-NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTR 155 +I + N + + + G LNL + + WW+ Q +R Sbjct: 842 RQKSIDFFMNNVDVEVFLVSLKAGGVALNLTEASRVFI-VDPWWNPAAEWQSADRC---- 896 Query: 156 QRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETI 203 + G +R + L +++++ ++ K+ + + +N + E + Sbjct: 897 -HRIGQRRPCVITRLCIEDSVESRIVLLQEKKANLINGTINKDQGEAL 943 >gi|170097814|ref|XP_001880126.1| SNF2 superfamily protein [Laccaria bicolor S238N-H82] gi|164644564|gb|EDR08813.1| SNF2 superfamily protein [Laccaria bicolor S238N-H82] Length = 828 Score = 89.6 bits (221), Expect = 2e-16, Method: Composition-based stats. Identities = 30/168 (17%), Positives = 58/168 (34%), Gaps = 30/168 (17%) Query: 48 WKEVHDEKIKALEVIIE-KANAAPIIVAYHFNSDLARLQKAFPQGRT----------LDK 96 + KI L +++ +V F S L ++ + + + Sbjct: 665 IRAGSSAKIDQLIHLLKLTPTNEKSLVFSQFTSFLDKIAETMDEEGIPYVRFDGQMSAKR 724 Query: 97 DPCTIQEWNEGKIP-------------LLFAHPASCGHGLNLQYG-GNILVFFSLWWDLE 142 T+ ++E ++ + GLNL N + WW Sbjct: 725 RQETLASFSEKGNRRPRSGLASKRNPRVMLISLKAGALGLNLTGKFANNVYLMDPWWQEG 784 Query: 143 EHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 Q ++R+ + G K+ V VY LIA++T++ VL+ K + Sbjct: 785 IESQAVDRVN-----RIGQKKNVHVYQLIAEDTVESKVLEIQERKKQL 827 >gi|310791010|gb|EFQ26543.1| SNF2 family domain-containing protein [Glomerella graminicola M1.001] Length = 1037 Score = 89.6 bits (221), Expect = 2e-16, Method: Composition-based stats. Identities = 34/181 (18%), Positives = 67/181 (37%), Gaps = 21/181 (11%) Query: 32 CLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLAR------ 83 C A E W + K+ L +I + N ++V F + Sbjct: 839 CRDYACIRHLDVPEGSW--MDSGKVTKLLQLIHQYRDNGDRVLVFSKFAKVIEILREVLH 896 Query: 84 ---LQKAFPQGRTLDKDPCT-IQEWNEG-KIPLLFAHPASCGHGLNLQYGGNILVFFSLW 138 ++ G+T + I ++N+ I + G G+NL N ++ F Sbjct: 897 TDGIKHCVLYGQTSVGERQDLIDDFNKDIDITAFLLTTGAGGTGINLT-SANKIIIFDQS 955 Query: 139 WDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNAL 198 + ++ Q R + G R V V L+ +TI+EL+ + + K + + + A+ Sbjct: 956 DNPQDDIQA-----ENRAHRLGQTRDVEVIRLLTAHTIEELIYKACQKKIELAEKVTGAV 1010 Query: 199 K 199 + Sbjct: 1011 E 1011 >gi|268536304|ref|XP_002633287.1| Hypothetical protein CBG06016 [Caenorhabditis briggsae] Length = 1369 Score = 89.6 bits (221), Expect = 2e-16, Method: Composition-based stats. Identities = 34/159 (21%), Positives = 65/159 (40%), Gaps = 20/159 (12%) Query: 55 KIKALEVIIEK--ANAAPIIVAYHFNSDLARLQ---------KAFPQGRTL-DKDPCTIQ 102 K++ L+ I+ K A +++ + + + + G T D+ ++ Sbjct: 886 KLELLDRILPKLKATGHRVLMFFQMTTMMTIFEDYLNFRQYTYLRLDGSTKPDERGELLK 945 Query: 103 EWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 +N K L + G GLNLQ + ++ F W+ + Q R + G Sbjct: 946 MFNAPDSKYFLFMLSTRAGGLGLNLQT-ADTVIIFDSDWNPHQDMQA-----QDRAHRIG 999 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 K+ V V LI N+++E +L R K + + ++ A K Sbjct: 1000 QKKEVRVLRLITANSVEEKILAAARYKLNVDEKVIQAGK 1038 >gi|73997935|ref|XP_534944.2| PREDICTED: similar to DNA excision repair protein ERCC-6 (Cockayne syndrome protein CSB) [Canis familiaris] Length = 1486 Score = 89.6 bits (221), Expect = 2e-16, Method: Composition-based stats. Identities = 34/172 (19%), Positives = 62/172 (36%), Gaps = 21/172 (12%) Query: 43 DEEKHWKEVHDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQK----------AFPQ 90 D+ +WK K+ +E +++ +++ L L+ Sbjct: 825 DQFGYWKR--SGKMIVVESLLKIWHKQGQRVLLFSQSRQMLDILEVFLRAQKYSYLKMDG 882 Query: 91 GRTLDKDPCTIQEWNEG-KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIE 149 + I +NE I + G G+NL G N ++ + W+ Q E Sbjct: 883 TTAIASRQPLITRYNEDTSIFVFLLTTRVGGIGVNLT-GANRVIIYDPDWNPSTDTQARE 941 Query: 150 RIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 R + G K+ V VY L+ TI+E + R K + + +L K+ Sbjct: 942 RAW-----RIGQKKQVTVYRLLTAGTIEEKIYHRQIFKQFLTNRVLKDPKQR 988 >gi|71755921|ref|XP_828875.1| DNA repair protein [Trypanosoma brucei TREU927] gi|70834261|gb|EAN79763.1| DNA repair protein, putative [Trypanosoma brucei] Length = 762 Score = 89.6 bits (221), Expect = 2e-16, Method: Composition-based stats. Identities = 34/170 (20%), Positives = 65/170 (38%), Gaps = 21/170 (12%) Query: 46 KHWKEVHDEKIKALEVIIEKAN----AAPIIVAYHFNSDLARLQKAFPQGRT-------- 93 K+ + K++ + I+ +I+ HF S + + A Sbjct: 547 KNEEVEVSTKLQMILDSIQAMKKNCPDDKMIIFSHFTSFMDVISVALDNLDIAHLRLDGT 606 Query: 94 --LDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 L I+ + + ++ A + G GLNL ++LV WW+ +Q + R Sbjct: 607 MSLSSRNLVIRCFQSSDDVRVILASKTATGVGLNLTAANHVLV-VDPWWNPAIEEQAVHR 665 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKK 200 + G ++ V V +I ++TI++ + R K D +L A K Sbjct: 666 C-----YRIGQRKHVHVKRIIIEDTIEQYCYEICRRKKEFGDAILRAATK 710 >gi|261334803|emb|CBH17797.1| DNA repair protein, putative [Trypanosoma brucei gambiense DAL972] Length = 762 Score = 89.6 bits (221), Expect = 2e-16, Method: Composition-based stats. Identities = 34/170 (20%), Positives = 65/170 (38%), Gaps = 21/170 (12%) Query: 46 KHWKEVHDEKIKALEVIIEKAN----AAPIIVAYHFNSDLARLQKAFPQGRT-------- 93 K+ + K++ + I+ +I+ HF S + + A Sbjct: 547 KNEEVEVSTKLQMILDSIQAMKKNCPDDKMIIFSHFTSFMDVISVALDNLDIAHLRLDGT 606 Query: 94 --LDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 L I+ + + ++ A + G GLNL ++LV WW+ +Q + R Sbjct: 607 MSLSSRNLVIRCFQSSDDVRVILASKTATGVGLNLTAANHVLV-VDPWWNPAIEEQAVHR 665 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKK 200 + G ++ V V +I ++TI++ + R K D +L A K Sbjct: 666 C-----YRIGQRKHVHVKRIIIEDTIEQYCYEICRRKKEFGDAILRAATK 710 >gi|154279322|ref|XP_001540474.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1] gi|150412417|gb|EDN07804.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1] Length = 1148 Score = 89.6 bits (221), Expect = 2e-16, Method: Composition-based stats. Identities = 36/162 (22%), Positives = 66/162 (40%), Gaps = 19/162 (11%) Query: 46 KHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFN-------SDLARLQKAF--PQGRTL 94 K+ + +H K+ L ++ + N ++ F L LQ F G T Sbjct: 933 KNDEWMHSGKVDKLCDLLRRFKENGDRTLIFSQFTMVMDILEHVLQTLQMRFFRLDGSTS 992 Query: 95 DKDPC-TIQEWNEG-KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIG 152 +D T+ ++E IP+ + G G+NL N ++ F ++ +E Q Sbjct: 993 VEDRQSTLDAFHEQVDIPVFLLSTKAGGAGINL-ACANKVIIFDSSFNPQEDVQA----- 1046 Query: 153 VTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 R + G R V V L+ ++TI+E + +TK + + Sbjct: 1047 ENRAHRVGQTRPVEVVRLVTRDTIEEQIYALGQTKLALDQRV 1088 >gi|326468544|gb|EGD92553.1| SNF2 family ATP dependent chromatin remodeling factor snf21 [Trichophyton tonsurans CBS 112818] Length = 1352 Score = 89.6 bits (221), Expect = 2e-16, Method: Composition-based stats. Identities = 39/225 (17%), Positives = 77/225 (34%), Gaps = 33/225 (14%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQL---ANGAVYYDE----------EKHW 48 K Y + + + +QL N +D Sbjct: 778 KLYKQLVTHNKLAVSDGKGGKTPVRGLSNMLMQLRKLCNHPFVFDSVEEELNPGKATNDL 837 Query: 49 KEVHDEKIKALEVIIEK--ANAAPIIVAYH------FNSDLAR---LQKAFPQGRTLDKD 97 K + L+ I+ K A+ +++ + D R ++ G T D Sbjct: 838 IWRTAGKFELLDRILPKFFASGHRVLMFFQMTQIMNIMEDFLRFRGMKYLRLDGATKSDD 897 Query: 98 PCTI-QEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 + + +NE + + G GLNLQ + ++ + W+ + Q Sbjct: 898 RSDLLRRFNEPGSEYFCFLLSTRAGGLGLNLQT-ADTVIIYDSDWNPHQDLQA-----QD 951 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 R + G K V + LI+ N+++E +L+R + K + ++ A K Sbjct: 952 RAHRIGQKNEVRILRLISSNSVEERILERAQFKLDMDGKVIQAGK 996 >gi|326434134|gb|EGD79704.1| hypothetical protein PTSG_10689 [Salpingoeca sp. ATCC 50818] Length = 1641 Score = 89.6 bits (221), Expect = 2e-16, Method: Composition-based stats. Identities = 35/221 (15%), Positives = 68/221 (30%), Gaps = 27/221 (12%) Query: 2 KQYHKFQREL-YCDLQGENIEAFNSASKTVKCLQ-------LANGAVYYDEEKHWKEVHD 53 Y F ++ + AF+ K LA+ Y D Sbjct: 951 ALYEHFLASRDVGEILRGELTAFHGIDLLRKICNHPDLAPSLADPPDYSDPSVPLPWERS 1010 Query: 54 EKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFP-----------QGRTLDKDPCT 100 K+ L ++ +++ L L+ + P Sbjct: 1011 GKMIVLRQLLRIWFQKQHRVLLFCQTRQMLNMLESFIKYEHYTYLRLDGTVSVKQRQPLI 1070 Query: 101 IQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 + ++ + + G GLNL G + ++ F W+ Q ER + G Sbjct: 1071 RYFNDNPEVFIFILTTRTGGLGLNLT-GADRVIIFDPDWNPSVDVQAKERAW-----RIG 1124 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 ++ V +Y L+ TI+E + R K + ++ K+ Sbjct: 1125 QQKPVTIYRLLTAGTIEEKIYHRQVFKQLLTFKVMKDPKQR 1165 >gi|326429323|gb|EGD74893.1| hypothetical protein PTSG_07121 [Salpingoeca sp. ATCC 50818] Length = 808 Score = 89.6 bits (221), Expect = 2e-16, Method: Composition-based stats. Identities = 22/101 (21%), Positives = 45/101 (44%), Gaps = 6/101 (5%) Query: 95 DKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 D+ + + + + + G GLNL G + + + W+ + Q +R Sbjct: 627 DRKEEIRRFHEDDECFVFLLSTRAGGLGLNL-VGADTCIIYDSDWNPQVDLQAQDRC--- 682 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 + G + V V+ LI NT+D+ +L+R K ++ L++ Sbjct: 683 --HRIGQSKTVLVFRLITANTVDQRILERAAGKRKLERLVI 721 >gi|303283067|ref|XP_003060825.1| predicted protein [Micromonas pusilla CCMP1545] gi|226458296|gb|EEH55594.1| predicted protein [Micromonas pusilla CCMP1545] Length = 214 Score = 89.6 bits (221), Expect = 2e-16, Method: Composition-based stats. Identities = 33/193 (17%), Positives = 69/193 (35%), Gaps = 31/193 (16%) Query: 9 RELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKAN- 67 R++ C EA ++A A + + K+ AL+ ++ K + Sbjct: 39 RKVCCHPFLFGDEAVHAAV-----------AKHGGDRVEALIAASGKLTALDEMLPKLHA 87 Query: 68 -AAPIIVAYHFNSDLARLQK----------AFPQGRTLDKDPCTIQEWN--EGKIPLLFA 114 +++ F+ L L++ +L + +N +G+ + Sbjct: 88 GGHKVLIFSQFSMMLDVLEEFCEARGHAHLRLDGSTSLARRRYETALFNKPDGRHFVYLC 147 Query: 115 HPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQN 174 + G G+NLQ + ++ W+ QQ R + G KR V V + + Sbjct: 148 STRAGGLGINLQ-SADTVILADPDWNPTYDQQA-----QDRAHRLGQKRPVTVIRMCHAS 201 Query: 175 TIDELVLQRLRTK 187 +++E +L K Sbjct: 202 SVEEGILAVAAKK 214 >gi|119479961|ref|XP_001260009.1| DNA excision repair protein (Rad26L), putative [Neosartorya fischeri NRRL 181] gi|119408163|gb|EAW18112.1| DNA excision repair protein (Rad26L), putative [Neosartorya fischeri NRRL 181] Length = 1077 Score = 89.6 bits (221), Expect = 2e-16, Method: Composition-based stats. Identities = 34/138 (24%), Positives = 51/138 (36%), Gaps = 17/138 (12%) Query: 66 ANAAPIIVAYHFNSDLARLQKAF----------PQGRTLDKDPCTIQEWN-EGKIPLLFA 114 AN ++V H L LQ F T ++ + E+N + K + Sbjct: 702 ANGDKVLVFSHSVRLLKMLQMLFHYTSYNVSYLDGSMTYEERTKVVDEFNSDPKQFVFLI 761 Query: 115 HPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQN 174 S G GLN+ N +V W+ Q R + G R V V+ LI+ Sbjct: 762 STRSGGVGLNIT-SANKVVVVDPNWNPSHDLQA-----QDRAYRIGQSRNVEVFRLISAG 815 Query: 175 TIDELVLQRLRTKSTIQD 192 TI+E+V R K + Sbjct: 816 TIEEIVYARQIYKQQQAN 833 >gi|326479975|gb|EGE03985.1| SNF2-family ATP dependent chromatin remodeling factor snf21 [Trichophyton equinum CBS 127.97] Length = 1352 Score = 89.6 bits (221), Expect = 2e-16, Method: Composition-based stats. Identities = 39/225 (17%), Positives = 77/225 (34%), Gaps = 33/225 (14%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQL---ANGAVYYDE----------EKHW 48 K Y + + + +QL N +D Sbjct: 778 KLYKQLVTHNKLAVSDGKGGKTPVRGLSNMLMQLRKLCNHPFVFDSVEEELNPGKATNDL 837 Query: 49 KEVHDEKIKALEVIIEK--ANAAPIIVAYH------FNSDLAR---LQKAFPQGRTLDKD 97 K + L+ I+ K A+ +++ + D R ++ G T D Sbjct: 838 IWRTAGKFELLDRILPKFFASGHRVLMFFQMTQIMNIMEDFLRFRGMKYLRLDGATKSDD 897 Query: 98 PCTI-QEWNEGKIPLL--FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 + + +NE + + G GLNLQ + ++ + W+ + Q Sbjct: 898 RSDLLRRFNEPESEYFCFLLSTRAGGLGLNLQT-ADTVIIYDSDWNPHQDLQA-----QD 951 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 R + G K V + LI+ N+++E +L+R + K + ++ A K Sbjct: 952 RAHRIGQKNEVRILRLISSNSVEERILERAQFKLDMDGKVIQAGK 996 >gi|326775329|ref|ZP_08234594.1| SNF2-related protein [Streptomyces cf. griseus XylebKG-1] gi|326655662|gb|EGE40508.1| SNF2-related protein [Streptomyces cf. griseus XylebKG-1] Length = 743 Score = 89.6 bits (221), Expect = 2e-16, Method: Composition-based stats. Identities = 35/191 (18%), Positives = 77/191 (40%), Gaps = 24/191 (12%) Query: 14 DLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKAN--AAPI 71 +L E+ EA+ A + + L++ A Y E K+ L ++++A+ + Sbjct: 525 ELGAEDREAYREAVASGRFLRMRRAA-YAVPE------ASAKLGRLRELVDEASESGLKV 577 Query: 72 IVAYHFNSDLARLQKAF--------PQGRTLDKDPCTIQEWNEGK-IPLLFAHPASCGHG 122 +V +F LA + +A + + ++ +L + + G G Sbjct: 578 VVFSYFREVLATVGEALGPDAFGPLSGSVAPARRQELVDAFSAVDGHAVLLSQIQAGGTG 637 Query: 123 LNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQ 182 LN+Q ++++ Q + R + G R V V+ L+A +++D+ +++ Sbjct: 638 LNMQ-AASVVILCEPQIKPTLEHQAVAR-----AHRMGQVRPVQVHRLLATDSVDQRLVE 691 Query: 183 RLRTKSTIQDL 193 L K + D Sbjct: 692 LLARKDRLFDA 702 >gi|50312307|ref|XP_456186.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140] gi|49645322|emb|CAG98894.1| KLLA0F24838p [Kluyveromyces lactis] Length = 1062 Score = 89.6 bits (221), Expect = 2e-16, Method: Composition-based stats. Identities = 43/226 (19%), Positives = 85/226 (37%), Gaps = 43/226 (19%) Query: 6 KFQRELYCDLQGENIEAFNSAS--------KTVKCLQLAN-------------GAVYYDE 44 Q E Y L ++I+A N A +QL G Y + Sbjct: 375 DMQIEWYKSLLEKDIDAVNGAVGKREGKTRLLNIVMQLRKCCNHPYLFEGAEPGPPYTTD 434 Query: 45 EKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQK----------AFPQGR 92 E + K+ L+ +++K + +++ + L L+ Sbjct: 435 EHLV--FNSGKMIVLDKLLKKKKEQGSRVLIFSQMSRLLDILEDYCYFRGYEYCRIDGST 492 Query: 93 TLDKDPCTIQEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 + D+ I E+N+ + + + G G+NL + +V + W+ + Q ++R Sbjct: 493 SHDERVEAIDEYNKPNSEKFIFLLTTRAGGLGINL-VTADTVVLYDSDWNPQADLQAMDR 551 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + G K+ VFVY + +N I+E V++R K + L++ Sbjct: 552 -----AHRIGQKKQVFVYRFVTENAIEEKVIERAAQKLRLDQLVIQ 592 >gi|328702354|ref|XP_003241882.1| PREDICTED: TATA-binding protein-associated factor 172-like [Acyrthosiphon pisum] Length = 1782 Score = 89.6 bits (221), Expect = 2e-16, Method: Composition-based stats. Identities = 25/143 (17%), Positives = 54/143 (37%), Gaps = 20/143 (13%) Query: 69 APIIVAYHFNSDLARLQK-------------AFPQGRTLDKDPCTIQEWN-EGKIPLLFA 114 ++ S L ++ + + + +N + I L Sbjct: 1578 HRALIFCQLKSMLNIIENDLFKAHMPNVSYLRLDGSVPVSQRYALVNRFNVDPSIDTLIM 1637 Query: 115 HPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQN 174 G GLNL G + ++F W + Q ++R + G K+ V VY LI ++ Sbjct: 1638 TTQVGGLGLNLT-GADTVIFVEHDWSPMKDLQAMDR-----AHRIGQKKVVNVYRLITRS 1691 Query: 175 TIDELVLQRLRTKSTIQDLLLNA 197 T++E ++ + K + ++++ Sbjct: 1692 TLEEKIMNFQKFKLKTANTVISS 1714 >gi|83770000|dbj|BAE60135.1| unnamed protein product [Aspergillus oryzae] Length = 774 Score = 89.6 bits (221), Expect = 2e-16, Method: Composition-based stats. Identities = 28/147 (19%), Positives = 58/147 (39%), Gaps = 22/147 (14%) Query: 68 AAPIIVAYHFNSDLAR-------LQKAFPQGRTLDKDPCTIQ---------EWNEGKIPL 111 II+ +FN L +QK R + D T N+ + + Sbjct: 445 GRKIIIFSNFNQALNLCEDLLLTIQKNGDPVRYVRLDGSTSNARRNLSIYLFQNDPRYMV 504 Query: 112 LFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLI 171 + G GLNL + ++F W+ + +Q R+ + G K V ++ L Sbjct: 505 FLISIRAGGEGLNL-VSSSTVIFLDEDWNPQVMRQAEARV-----HRIGQKHPVRIFKLQ 558 Query: 172 AQNTIDELVLQRLRTKSTIQDLLLNAL 198 ++ T++E + +R+ K+ + ++ + Sbjct: 559 SKGTVEEQISRRIVKKAYVATKIMEDI 585 >gi|328772764|gb|EGF82802.1| hypothetical protein BATDEDRAFT_9456 [Batrachochytrium dendrobatidis JAM81] Length = 1238 Score = 89.6 bits (221), Expect = 2e-16, Method: Composition-based stats. Identities = 26/161 (16%), Positives = 62/161 (38%), Gaps = 20/161 (12%) Query: 52 HDEKIKALEVIIEKANA--APIIVAYHFNSDLARLQ----------KAFPQGRTLDKDPC 99 + K+ L+ ++ + +++ L L + + Sbjct: 481 NSGKMVLLDKLLASLHEGQHRVLIFSQMVRMLNILSDYLSYRGYTFQRLDGTTQSEVRKR 540 Query: 100 TIQEWNE-GKIPL-LFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 +++ +N G + G GLNL + ++ F W+ + Q I R Sbjct: 541 SMEHFNAAGSTDFAFLLSTRAGGLGLNL-ATADTVILFDSDWNPQNDLQAIAR-----AH 594 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNAL 198 + G K V VY ++++TI+E +++R + K ++ ++ + Sbjct: 595 RIGQKNTVNVYRFLSKDTIEEDIIERAKRKMVLEYSIIKTM 635 >gi|302845240|ref|XP_002954159.1| hypothetical protein VOLCADRAFT_30537 [Volvox carteri f. nagariensis] gi|300260658|gb|EFJ44876.1| hypothetical protein VOLCADRAFT_30537 [Volvox carteri f. nagariensis] Length = 462 Score = 89.6 bits (221), Expect = 2e-16, Method: Composition-based stats. Identities = 20/132 (15%), Positives = 43/132 (32%), Gaps = 18/132 (13%) Query: 68 AAPIIVAYHFNSDLARLQK----------AFPQGRTLDKDPCTIQEWNEGKIP--LLFAH 115 +++ L +++ + I ++N + Sbjct: 337 RHKVLLFATMTRALDLVEEYLEWRGFEWARLDGSTAAAERGALIADFNRPDSDTFIFLLS 396 Query: 116 PASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNT 175 + G GLNLQ + ++ + W+ + Q R + G R V V+ L+ T Sbjct: 397 LKAGGVGLNLQ-AADTVILYDTDWNPQLDLQAQAR-----AHRIGQTREVRVFRLLTAGT 450 Query: 176 IDELVLQRLRTK 187 I++ + K Sbjct: 451 IEQHIAAVAEEK 462 >gi|302308020|ref|NP_984796.2| AEL065Cp [Ashbya gossypii ATCC 10895] gi|299789257|gb|AAS52620.2| AEL065Cp [Ashbya gossypii ATCC 10895] Length = 1025 Score = 89.6 bits (221), Expect = 2e-16, Method: Composition-based stats. Identities = 33/129 (25%), Positives = 54/129 (41%), Gaps = 7/129 (5%) Query: 74 AYHFNSDLARLQKAFPQGRT-LDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNIL 132 H + +LA LQ G T + + +N G L G G+NL G N + Sbjct: 651 ISHKDPELAGLQYLRMDGTTNIAHRQALVDRFNNGPYHLFLLTTRVGGLGVNLT-GANRI 709 Query: 133 VFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQD 192 + F W+ Q ER + G KR V +Y L+ +I+E + R K + + Sbjct: 710 IIFDPDWNPSTDLQARERAW-----RIGQKRDVTIYLLMVAGSIEEKIYHRQIFKQFLTN 764 Query: 193 LLLNALKKE 201 +L+ K++ Sbjct: 765 KVLSDPKQK 773 >gi|145603372|ref|XP_369370.2| hypothetical protein MGG_06094 [Magnaporthe oryzae 70-15] gi|145011615|gb|EDJ96271.1| hypothetical protein MGG_06094 [Magnaporthe oryzae 70-15] Length = 763 Score = 89.6 bits (221), Expect = 2e-16, Method: Composition-based stats. Identities = 34/171 (19%), Positives = 65/171 (38%), Gaps = 29/171 (16%) Query: 43 DEEKHWKEVHD-------EKIKALEVIIE----KANAAPIIVAYHFNSDLARLQKAFPQG 91 ++ +V D K AL I++ K +++ +I+ + S L +Q+ + Sbjct: 572 EDNGRSVQVDDMDESAGSSKTDALLKILDGTLLKNSSSKVIIFSQWTSFLNVIQRQLEEH 631 Query: 92 RTLD------------KDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWW 139 T +D + + +L A C GLNL + ++ WW Sbjct: 632 TTYGYTRIDGTMKPVARDDAMRKLETDPDTRILLASLGVCSVGLNL-VTADTVILADSWW 690 Query: 140 DLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 Q I+R+ + G R V+ L+ ++T++E VL K + Sbjct: 691 APAIEDQAIDRV-----HRLGQTRPTTVWRLVMEDTVEERVLDVQSEKRDL 736 >gi|47211690|emb|CAF91815.1| unnamed protein product [Tetraodon nigroviridis] Length = 1369 Score = 89.6 bits (221), Expect = 2e-16, Method: Composition-based stats. Identities = 22/160 (13%), Positives = 53/160 (33%), Gaps = 20/160 (12%) Query: 45 EKHWKEVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQ----------KAFPQGR 92 + K+ L+ ++ + +++ L L+ + G Sbjct: 882 DGSALTKASGKLLLLQKMMRRLKEGGHRVLIFSQMTKMLDLLEDFLENEGYKYERIDGGI 941 Query: 93 TLDKDPCTIQEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 T I +N + + G G+NL + ++ + W+ Q Sbjct: 942 TGGMRQEAIDRFNAPGAQQFAFLLSTRAGGLGINL-ATADTVIIYDSDWNPHNDIQA--- 997 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 +R + G R V +Y + + +++E + Q + K + Sbjct: 998 --FSRAHRIGQNRKVMIYRFVTKASVEERITQVAKKKMML 1035 >gi|190346274|gb|EDK38320.2| hypothetical protein PGUG_02418 [Meyerozyma guilliermondii ATCC 6260] Length = 847 Score = 89.6 bits (221), Expect = 2e-16, Method: Composition-based stats. Identities = 25/168 (14%), Positives = 57/168 (33%), Gaps = 23/168 (13%) Query: 45 EKHWKEVHDEKIKALEV----IIEKANAAPIIVAYHFNSDLARLQKAFPQG--------- 91 W+ KI+AL + + IV F S L ++ + Sbjct: 669 GGEWR--SSTKIEALVEELYKLRSDRHTIKSIVFSQFTSMLDLIEWRLKRAGFETVKLQG 726 Query: 92 --RTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIE 149 +D + + + G LNL + + WW+ Q ++ Sbjct: 727 SMSPQQRDNTIRHFMENTGVEVFLVSLKAGGVALNLCE-ASQVFLMDPWWNPSVEWQSMD 785 Query: 150 RIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 R+ + G KR + + +++I+ +++ K+ + + +N+ Sbjct: 786 RV-----HRIGQKRPIRITRFCIEDSIESKIIELQEKKANMINATINS 828 >gi|255726014|ref|XP_002547933.1| chromatin remodelling complex ATPase chain ISW1 [Candida tropicalis MYA-3404] gi|240133857|gb|EER33412.1| chromatin remodelling complex ATPase chain ISW1 [Candida tropicalis MYA-3404] Length = 1063 Score = 89.6 bits (221), Expect = 2e-16, Method: Composition-based stats. Identities = 42/224 (18%), Positives = 82/224 (36%), Gaps = 39/224 (17%) Query: 6 KFQRELYCDLQGENIEAFNSAS--------KTVKCLQL---ANGAVYYD--------EEK 46 Q + Y L ++I+A N +QL N +D Sbjct: 387 DMQVDWYKRLLEKDIDAVNGVVGKREGKTRLLNIVMQLRKCCNHPYLFDGAEPGPPYTTD 446 Query: 47 HWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQ---------KAFPQGRTLD 95 + K+ L+ +++K A + +++ + L L+ G T Sbjct: 447 EHLVFNSGKMIILDKMLKKFKAEGSRVLIFSQMSRLLDILEDYCYFREYEYCRIDGSTSH 506 Query: 96 KDPCT-IQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIG 152 +D I E+N + + G G+NL +I++ + W+ + Q ++R Sbjct: 507 EDRIDAIDEYNSPDSEKFIFLLTTRAGGLGINLT-SADIVILYDSDWNPQADLQAMDR-- 563 Query: 153 VTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + G K+ V VY + + I+E VL+R K + L++ Sbjct: 564 ---AHRIGQKKQVKVYRFVTEMAIEEKVLERAAQKLRLDQLVIQ 604 >gi|154340309|ref|XP_001566111.1| DNA repair protein [Leishmania braziliensis MHOM/BR/75/M2904] gi|134063430|emb|CAM39609.1| putative DNA repair protein [Leishmania braziliensis MHOM/BR/75/M2904] Length = 736 Score = 89.6 bits (221), Expect = 2e-16, Method: Composition-based stats. Identities = 33/185 (17%), Positives = 71/185 (38%), Gaps = 23/185 (12%) Query: 24 NSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLAR 83 + + T + Q Y + E ++++ + + A +I+ F S + Sbjct: 484 TTLTSTQRIAQ------YKNNEFELSTKLRMVLRSIHDMQKNHPADKMIIFSQFTSFMDV 537 Query: 84 LQKAFPQGRT----------LDKDPCTIQEWNEGK-IPLLFAHPASCGHGLNLQYGGNIL 132 + + + L I+++ + I ++ A + G GLNL +++ Sbjct: 538 ISVSLDRYNIAFLRIDGTMSLSNRNAVIRQFQTSEHIKIVLASKTATGVGLNLTAANHVI 597 Query: 133 VFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQD 192 V WW+ +Q + R + G K+ V+V I +TI++ + + K D Sbjct: 598 V-VDPWWNPAIEEQAVHRC-----YRIGQKKPVYVTRFIIADTIEQYCYEICQRKKEFGD 651 Query: 193 LLLNA 197 +L A Sbjct: 652 AVLRA 656 >gi|302892613|ref|XP_003045188.1| SNF2 superfamily RAD5 protein [Nectria haematococca mpVI 77-13-4] gi|256726113|gb|EEU39475.1| SNF2 superfamily RAD5 protein [Nectria haematococca mpVI 77-13-4] Length = 1146 Score = 89.6 bits (221), Expect = 2e-16, Method: Composition-based stats. Identities = 31/161 (19%), Positives = 55/161 (34%), Gaps = 21/161 (13%) Query: 49 KEVHDEKIKALEV----IIEKANAAPIIVAYHFNSDLARLQKAFPQGRTL---------- 94 K+ AL + + +V F S L+ ++ A + Sbjct: 971 VNDSSAKVVALMSELRALRREHPKMKSVVFSQFTSFLSLIEPALTKANIKYLRLDGSMAQ 1030 Query: 95 DKDPCTIQEWNEGK-IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGV 153 + E+ E K +L + G GLNL G + WW Q I+R+ Sbjct: 1031 KARAAVLTEFTERKGFTVLLLSLRAGGVGLNLTSAG-RVFMMDPWWSFAVEAQAIDRV-- 1087 Query: 154 TRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 + G + V V + + +++E +L+ K I L Sbjct: 1088 ---HRMGQESEVQVKRFVVKESVEERMLKVQERKKFIATSL 1125 >gi|312216637|emb|CBX96587.1| similar to DNA repair protein rad5 [Leptosphaeria maculans] Length = 1192 Score = 89.6 bits (221), Expect = 2e-16, Method: Composition-based stats. Identities = 36/157 (22%), Positives = 59/157 (37%), Gaps = 21/157 (13%) Query: 53 DEKIKALEVIIEKA----NAAPIIVAYHFNSDLARLQKA----------FPQGRTLDKDP 98 K++AL ++K A +V F S L ++ A F + + Sbjct: 1021 SAKMQALLGHLKKTRKVEKDAKTVVFSQFTSFLDLIEPALARDHIPFLRFDGSISQKQRA 1080 Query: 99 CTIQEWNEGKIP-LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 + E+ P +L + G GLNL N + WW Q I+R+ Sbjct: 1081 HILTEFTASPKPYVLLLSLRAGGVGLNLTC-ANKVFMMDPWWSFAVEAQAIDRV-----H 1134 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 + G +R V V + Q +I+E +L+ K I L Sbjct: 1135 RMGQEREVKVVRFVVQGSIEEKMLRIQERKKFIASSL 1171 >gi|260949761|ref|XP_002619177.1| hypothetical protein CLUG_00336 [Clavispora lusitaniae ATCC 42720] gi|238846749|gb|EEQ36213.1| hypothetical protein CLUG_00336 [Clavispora lusitaniae ATCC 42720] Length = 187 Score = 89.6 bits (221), Expect = 2e-16, Method: Composition-based stats. Identities = 34/155 (21%), Positives = 61/155 (39%), Gaps = 26/155 (16%) Query: 56 IKALEVIIEKANAAPIIVAYHFNSDLARLQKAFP---------------QGRT-LDKDPC 99 + L + E++ ++V F+S L ++ GR L++ Sbjct: 14 LSHLRALKEQSPGFQVVVFSQFSSYLDLIENELKLLDGGGETEFSVYKFDGRLNLNERDK 73 Query: 100 TIQEW----NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTR 155 +Q++ EGKI +L + G GLNL N WW Q I+RI Sbjct: 74 ILQQFVQKSEEGKITVLLLSLKAGGVGLNLTC-ANKAFMMDPWWSPSIEDQAIDRI---- 128 Query: 156 QRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 + G ++ V V + +N+I+ +L+ K + Sbjct: 129 -HRIGQEQNVKVTRFVVKNSIETKMLKIQERKRMM 162 >gi|307197496|gb|EFN78730.1| Transcription termination factor 2 [Harpegnathos saltator] Length = 935 Score = 89.6 bits (221), Expect = 2e-16, Method: Composition-based stats. Identities = 39/171 (22%), Positives = 68/171 (39%), Gaps = 19/171 (11%) Query: 45 EKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFN------SDLARLQKA----FPQGRTL 94 + + ++ I+ + N IIV+ S L ++ A F + Sbjct: 758 DDRVSSKMRTVLDMVKKIL-QTNDKLIIVSQWATLLNVIASHLEFVEGATFAKFTGNVAI 816 Query: 95 DKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIG 152 P I +N+ +L + G GLNL G N L+ F + W+ + Q +RI Sbjct: 817 KDRPAIIDSFNKSNSDPRILLLSLTAGGVGLNL-VGANHLLLFDIHWNPQLESQAQDRI- 874 Query: 153 VTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETI 203 + G K+ V++Y I NTI+E + K I +L+ + + I Sbjct: 875 ----YRFGQKKDVYIYKFICSNTIEERIKGLQEQKLAIAQNVLSGDRSKEI 921 >gi|326923687|ref|XP_003208066.1| PREDICTED: DNA excision repair protein ERCC-6-like, partial [Meleagris gallopavo] Length = 1498 Score = 89.6 bits (221), Expect = 2e-16, Method: Composition-based stats. Identities = 35/172 (20%), Positives = 63/172 (36%), Gaps = 21/172 (12%) Query: 43 DEEKHWKEVHDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQK----------AFPQ 90 D+ +WK K+ +E +++ ++ L L+ Sbjct: 828 DQFGYWKR--SGKMIVVESLLKIWHKQGHRVLFFTQSRQMLQILEVFVRDRNYSYLRMDG 885 Query: 91 GRTLDKDPCTIQEWNEGK-IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIE 149 T+ I +NE K I + G G+NL G + ++ + W+ Q E Sbjct: 886 TTTIASRQPLITRYNEDKSIFIFLLTTRVGGIGVNLT-GADRVIIYDPDWNPSTDTQARE 944 Query: 150 RIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 R + G K+ V VY L+ TI+E + R K + + +L K+ Sbjct: 945 RAW-----RIGQKKQVTVYRLLTAGTIEEKIYHRQIFKQFLTNRVLKDPKQR 991 >gi|255713990|ref|XP_002553277.1| KLTH0D13046p [Lachancea thermotolerans] gi|238934657|emb|CAR22839.1| KLTH0D13046p [Lachancea thermotolerans] Length = 1540 Score = 89.6 bits (221), Expect = 2e-16, Method: Composition-based stats. Identities = 35/159 (22%), Positives = 63/159 (39%), Gaps = 20/159 (12%) Query: 55 KIKALEVIIEK--ANAAPIIVAYHFNSD---------LARLQKAFPQGRTLDKDPCTI-Q 102 K + LE I+ K A I++ + L+ ++ G T D + Sbjct: 1012 KFELLERILPKFKATGHRILIFFQMTQIMDIMEDFLRLSGMKYLRLDGHTKSDDRTLLLN 1071 Query: 103 EWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 +N+ + + G GLNLQ + ++ F W+ + Q R + G Sbjct: 1072 LFNDPNSEYFCFLLSTRAGGLGLNLQT-ADTVIIFDTDWNPHQDLQA-----QDRAHRIG 1125 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 K V + LI +N+++E++L R K I ++ A K Sbjct: 1126 QKNEVRILRLITENSVEEVILDRAHKKLDIDGKVIQAGK 1164 >gi|196008861|ref|XP_002114296.1| hypothetical protein TRIADDRAFT_11949 [Trichoplax adhaerens] gi|190583315|gb|EDV23386.1| hypothetical protein TRIADDRAFT_11949 [Trichoplax adhaerens] Length = 616 Score = 89.6 bits (221), Expect = 2e-16, Method: Composition-based stats. Identities = 32/160 (20%), Positives = 61/160 (38%), Gaps = 19/160 (11%) Query: 55 KIKALEVIIEK--ANAAPIIVAYHFNS---------DLARLQKAFPQGRTLDKDPCTI-- 101 K+KALE ++ K + + +++ + + G T + I Sbjct: 424 KMKALEALLIKFKKDGSKVLLFSYSVQLLNILETYIMCKGINYCRLDGNTRIEQRADIVR 483 Query: 102 QEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGF 161 + N+ +I L + GLN ++L+ F W+ Q R + G Sbjct: 484 KFNNDPQISLCLISTKAGSLGLNFTGANSVLI-FDPNWNPAHDLQA-----QDRAYRIGQ 537 Query: 162 KRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 + V VY LI TI+E++ R K + ++ + K+ Sbjct: 538 RCDVRVYRLITSGTIEEVMYLRQIYKLQLANVAMQNSKER 577 >gi|157953042|ref|YP_001497934.1| hypothetical protein NY2A_B738L [Paramecium bursaria Chlorella virus NY2A] gi|155123269|gb|ABT15137.1| hypothetical protein NY2A_B738L [Paramecium bursaria Chlorella virus NY2A] Length = 458 Score = 89.6 bits (221), Expect = 2e-16, Method: Composition-based stats. Identities = 45/221 (20%), Positives = 84/221 (38%), Gaps = 34/221 (15%) Query: 8 QRELYCDLQGEN---IEAFNS----------ASKTVKCLQLANGA---VYYDEEKHWKEV 51 ++ELY +L ++A+N+ + ++ Q +++ W E Sbjct: 223 EKELYDELVENGRLLLKAYNAYGDGEGRMKLLEQLMRMRQCVTNPQLLFMKSDDERW-EG 281 Query: 52 HDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKA---------FPQGRTLDKDPCT-I 101 + K+ L+ I+ I+ ++ ++ ++ G+T ++ + Sbjct: 282 NYTKLNMLKREIQNNPIEKTIIFCNWIHEMISIENMLHSIGYDSVMLNGKTPNEQRDINV 341 Query: 102 QEWNEGK-IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 + +NE I S G GLNLQ + + SL W+ Q I R + G Sbjct: 342 KRFNEDDNINFFIVQIESGGIGLNLQVASRVFI-NSLSWNATTEIQAIAR-----AHRIG 395 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 + V V LI NT DE VL + K I + + + E Sbjct: 396 QTKDVTVKRLIINNTFDEYVLNLQQKKLEIASEIFDDKRIE 436 >gi|150864667|ref|XP_001383600.2| helicase of the Snf2/Rad54 family [Scheffersomyces stipitis CBS 6054] gi|149385923|gb|ABN65571.2| helicase of the Snf2/Rad54 family [Scheffersomyces stipitis CBS 6054] Length = 1093 Score = 89.6 bits (221), Expect = 2e-16, Method: Composition-based stats. Identities = 34/156 (21%), Positives = 68/156 (43%), Gaps = 19/156 (12%) Query: 57 KALEVIIEKANAAPIIVAYHFNSDLARLQK----------AFPQGRTLDKDPCTIQEWNE 106 K L++IIE +++ F L L++ +++ I E+ + Sbjct: 928 KTLKLIIEGRQEK-VLIFSLFTQVLDILERVLTQFKYKFVRLDGATSVESRQDIIDEFYD 986 Query: 107 GK-IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 + IP+ + G G+NL N+++ F ++ + +Q +R + G K+ V Sbjct: 987 DETIPIFLLSTKAGGFGINLIAANNVII-FDQSFNPHDDKQAEDRC-----HRVGQKKEV 1040 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 VY LI +T++E +L+ K + D ++A E Sbjct: 1041 TVYKLIVNDTVEENMLKLAENKLQL-DQTISAEGAE 1075 >gi|302917785|ref|XP_003052516.1| hypothetical protein NECHADRAFT_105975 [Nectria haematococca mpVI 77-13-4] gi|256733456|gb|EEU46803.1| hypothetical protein NECHADRAFT_105975 [Nectria haematococca mpVI 77-13-4] Length = 915 Score = 89.6 bits (221), Expect = 2e-16, Method: Composition-based stats. Identities = 31/175 (17%), Positives = 65/175 (37%), Gaps = 19/175 (10%) Query: 44 EEKHWKEVHDEKIKALEVIIEKA-NAAPIIVAYHFNSDLARLQKAFPQGRT--------- 93 + + + KI+ L I++ IV F S L ++ F + R Sbjct: 708 DPHSPQVLASSKIRELIKILQAEVKEHKFIVFSQFTSMLDLVEPFFRKERFSFVRYDGSM 767 Query: 94 -LDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERI 151 D+ +++ + K +L GLNL +++ +W+ +Q I+R+ Sbjct: 768 KNDEREESLRRLRSDPKTRILLCSLKCGSLGLNLTAATRVVIL-EPFWNPFVEEQAIDRV 826 Query: 152 GVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN-ALKKETIHV 205 + V +Y L T++E +L K + + + ++KE + Sbjct: 827 -----HRLTQTVDVIIYKLTVTKTVEERILDLQEKKRLLAEQAIEGGMRKEGFKL 876 >gi|312378128|gb|EFR24784.1| hypothetical protein AND_10400 [Anopheles darlingi] Length = 2623 Score = 89.6 bits (221), Expect = 2e-16, Method: Composition-based stats. Identities = 27/173 (15%), Positives = 62/173 (35%), Gaps = 20/173 (11%) Query: 40 VYYDEEKHWKEVHDEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQKAFPQ------- 90 V D+ K+ L+ ++ + +++ L L + + Sbjct: 869 VNQDDVLQQLLKGSGKLVLLDKLLCRLKETGHRVLIFSQMVRMLDILAEYLQKRHFSYQR 928 Query: 91 --GRTLDK-DPCTIQEWN-EGKIPL-LFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQ 145 G + + +N EG + G G+NL + ++ F W+ + Sbjct: 929 LDGSIKGELRRQALDHFNAEGSTDFCFLLSTRAGGLGINL-ATADTVIIFDSDWNPQNDL 987 Query: 146 QMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNAL 198 Q R + G K V +Y L+ +++E +++R + K + L++ + Sbjct: 988 QAQAR-----AHRIGQKNQVNIYRLVTARSVEENIVERAKKKMVLDHLVIQRM 1035 >gi|255713090|ref|XP_002552827.1| KLTH0D02354p [Lachancea thermotolerans] gi|238934207|emb|CAR22389.1| KLTH0D02354p [Lachancea thermotolerans] Length = 1047 Score = 89.6 bits (221), Expect = 2e-16, Method: Composition-based stats. Identities = 29/147 (19%), Positives = 61/147 (41%), Gaps = 18/147 (12%) Query: 59 LEVIIEKANAAPIIVAYHFNSDLARLQKAF----------PQGRTLDKDPCTIQEWNEGK 108 L+ IIE ++V F L L+ A ++ I ++ E + Sbjct: 880 LKDIIE-HKKEKVLVFSLFTQMLDILEMALTTLNINFLRLDGSTQVNDRQALIDKFYEDE 938 Query: 109 -IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFV 167 IP+ + G G+NL ++++ F ++ + +Q +R + G + V + Sbjct: 939 SIPVFILSTKAGGFGINLVCANHVII-FDQSFNPHDDKQAADR-----SHRVGQTKTVHI 992 Query: 168 YYLIAQNTIDELVLQRLRTKSTIQDLL 194 L+ +N+I+E +LQ + K + + Sbjct: 993 TTLVTRNSIEEKILQLAKNKLALDTYI 1019 >gi|157953853|ref|YP_001498744.1| hypothetical protein AR158_C663L [Paramecium bursaria Chlorella virus AR158] gi|156068501|gb|ABU44208.1| hypothetical protein AR158_C663L [Paramecium bursaria Chlorella virus AR158] Length = 458 Score = 89.6 bits (221), Expect = 2e-16, Method: Composition-based stats. Identities = 45/221 (20%), Positives = 84/221 (38%), Gaps = 34/221 (15%) Query: 8 QRELYCDLQGEN---IEAFNS----------ASKTVKCLQLANGA---VYYDEEKHWKEV 51 ++ELY +L ++A+N+ + ++ Q +++ W E Sbjct: 223 EKELYDELVENGRLLLKAYNAYGDGEGRMKLLEQLMRMRQCVTNPQLLFMKSDDERW-EG 281 Query: 52 HDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKA---------FPQGRTLDKDPCT-I 101 + K+ L+ I+ I+ ++ ++ ++ G+T ++ + Sbjct: 282 NYTKLNMLKREIQNNPIEKTIIFCNWIHEMISIENMLHSIGYDSVMLNGKTPNEQRDINV 341 Query: 102 QEWNEGK-IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 + +NE I S G GLNLQ + + SL W+ Q I R + G Sbjct: 342 KRFNEDDNINFFIVQIESGGIGLNLQVASRVFI-NSLSWNATTEIQAIAR-----AHRIG 395 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 + V V LI NT DE VL + K I + + + E Sbjct: 396 QTKDVTVKRLIINNTFDEYVLNLQQKKLEIASEIFDDKRIE 436 >gi|321262907|ref|XP_003196172.1| DNA repair protein RAD5 [Cryptococcus gattii WM276] gi|317462647|gb|ADV24385.1| DNA repair protein RAD5, putative [Cryptococcus gattii WM276] Length = 1359 Score = 89.6 bits (221), Expect = 2e-16, Method: Composition-based stats. Identities = 30/154 (19%), Positives = 58/154 (37%), Gaps = 21/154 (13%) Query: 65 KANAAPI----IVAYHFNSDLARLQKAFPQGR----------TLDKDPCTIQEWNEGK-I 109 A P+ IV + + L R+ + T D+ I K + Sbjct: 1199 DAEGKPVVTKSIVFSQWTTMLDRIADMLDETNIRYARLDGTMTRDERSRAIDALRHKKNV 1258 Query: 110 PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYY 169 +L + G GLNL + +W+ Q I+RI + G R V Sbjct: 1259 EVLLVSTRAGGVGLNLTV-ASRCYLVDPYWNPSVESQAIDRI-----HRMGQTRPVVAIK 1312 Query: 170 LIAQNTIDELVLQRLRTKSTIQDLLLNALKKETI 203 L+ +++I+E + + + K+ + L L + ++ + Sbjct: 1313 LMIKDSIEEKLDKIQKKKAELAQLSLKNMSRKEL 1346 >gi|290983303|ref|XP_002674368.1| helicase-like protein [Naegleria gruberi] gi|284087958|gb|EFC41624.1| helicase-like protein [Naegleria gruberi] Length = 745 Score = 89.6 bits (221), Expect = 2e-16, Method: Composition-based stats. Identities = 28/152 (18%), Positives = 61/152 (40%), Gaps = 20/152 (13%) Query: 56 IKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLD-----------KDPCTIQEW 104 +K LE + K N +++ L L+ + + I+E+ Sbjct: 526 VKMLENL--KKNGHKVLIFSLMTRFLDVLEDYLECRGDMKYCRIDGSIAQTEREQKIKEF 583 Query: 105 NEG-KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKR 163 N+ + + G G+NL + ++ + W+ + Q +R + G KR Sbjct: 584 NQDEDVFCFLLSTRAGGLGINLT-AADTVIIYDSDWNPQIDLQAQDRC-----HRIGQKR 637 Query: 164 AVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 +V ++ L+ T+++ VLQ K ++ L++ Sbjct: 638 SVRIFRLLTLGTVEKKVLQTATKKLKLERLII 669 >gi|238879242|gb|EEQ42880.1| DNA repair protein RAD16 [Candida albicans WO-1] Length = 852 Score = 89.6 bits (221), Expect = 2e-16, Method: Composition-based stats. Identities = 26/167 (15%), Positives = 56/167 (33%), Gaps = 23/167 (13%) Query: 45 EKHWKEVHDEKIKALEV----IIEKANAAPIIVAYHFNSDLARLQKAFPQG--------- 91 W+ KI+AL + + IV F S L +Q + Sbjct: 674 GGEWR--SSTKIEALVEELYKLRSDRHTIKSIVFSQFTSMLDLIQWRLKRAGFNTVKLSG 731 Query: 92 --RTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIE 149 +D ++ + + G LNL + + WW+ Q ++ Sbjct: 732 SMSPQQRDNTIKHFMENTEVEVFLVSLKAGGVALNLCE-ASQVFLMDPWWNPSVEWQSMD 790 Query: 150 RIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 R+ + G KR + + +++I+ +++ K+ + +N Sbjct: 791 RV-----HRIGQKRPIRITRFCIEDSIESKIIELQEKKANMIHATIN 832 >gi|328867898|gb|EGG16279.1| SNF2-related domain-containing protein [Dictyostelium fasciculatum] Length = 1282 Score = 89.6 bits (221), Expect = 3e-16, Method: Composition-based stats. Identities = 33/160 (20%), Positives = 64/160 (40%), Gaps = 20/160 (12%) Query: 52 HDEKIKALEVII--EKANAAPIIVAYHFNSDLARLQKAF---------PQGRTL-DKDPC 99 K ++ I+ KA+ +++ + + + F G T ++ Sbjct: 645 ASGKFDMMDQILLKMKASGHRVLIFTQMTEVINLMGEYFSLKEWDYLRLDGSTKPEERSR 704 Query: 100 TIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 + EWN P + + G G+NLQ + ++ F W+ + Q +R Sbjct: 705 LVVEWNRKDSPFFIFVLSTHAGGLGMNLQT-ADTVIIFDSDWNPQMDLQAQDRC-----H 758 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + G V V+ LI+ N+I+E +L+R K I ++ A Sbjct: 759 RVGQVNRVNVFRLISANSIEEKILERATDKLEIDAKIIQA 798 >gi|83770096|dbj|BAE60231.1| unnamed protein product [Aspergillus oryzae] Length = 777 Score = 89.6 bits (221), Expect = 3e-16, Method: Composition-based stats. Identities = 30/168 (17%), Positives = 60/168 (35%), Gaps = 21/168 (12%) Query: 51 VHDEKIKALE----VIIEKANAAPIIVAYHFNSDLA----RLQKAFPQGRTLD------K 96 KI+ L + K IV F S L RL++A LD + Sbjct: 601 TSSTKIEMLVYELYKLRSKKQTHKSIVFSQFTSMLQLVEWRLRRAGFNTVMLDGTMTPAQ 660 Query: 97 DPCTIQEW-NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTR 155 +I + N + + + G LNL + + WW+ Q +R Sbjct: 661 RQKSIDFFMNNVDVEVFLVSLKAGGVALNLTEASRVFI-VDPWWNPAAEWQSADRC---- 715 Query: 156 QRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETI 203 + G +R + L +++++ ++ K+ + + +N + E + Sbjct: 716 -HRIGQRRPCVITRLCIEDSVESRIVLLQEKKANLINGTINKDQGEAL 762 >gi|321461550|gb|EFX72581.1| hypothetical protein DAPPUDRAFT_227473 [Daphnia pulex] Length = 1801 Score = 89.6 bits (221), Expect = 3e-16, Method: Composition-based stats. Identities = 32/224 (14%), Positives = 76/224 (33%), Gaps = 40/224 (17%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEV 61 K Y ++ G A + ++ + N A +++ + + L+ Sbjct: 693 KNYTALRK-------GNKGSASTFVNIVMELKKCCNHAFLTKPQENERRYGASATEQLQQ 745 Query: 62 IIEKAN---------------AAPIIVAYHFNSDLARL-----QKAFPQGRTLDK----- 96 +I + +++ L + + FP R Sbjct: 746 LIRGSGKLVLLDKLLVRLRETGHRVLIFSQMVRMLDLIAEYLQLRHFPFQRLDGGIKGEL 805 Query: 97 DPCTIQEWN-EGKIPL-LFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 ++ +N EG + G G+NL + ++ F W+ + Q R Sbjct: 806 RRKAMEHFNAEGSQDFCFLLSTRAGGLGINL-ATADTVIIFDSDWNPQNDLQAQAR---- 860 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNAL 198 + G K V +Y L+ + +++E +++R + K + L++ + Sbjct: 861 -AHRIGQKNQVNIYRLVTKASVEEDIVERAKRKMVLDHLVIQRM 903 >gi|290976692|ref|XP_002671073.1| predicted protein [Naegleria gruberi] gi|284084639|gb|EFC38329.1| predicted protein [Naegleria gruberi] Length = 998 Score = 89.6 bits (221), Expect = 3e-16, Method: Composition-based stats. Identities = 30/154 (19%), Positives = 60/154 (38%), Gaps = 20/154 (12%) Query: 52 HDEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQKAFPQGRTL-----------DKDP 98 K + ++ ++EK N +++ + L + + Sbjct: 717 SSVKAQLVKHLVEKCNEEGHRVLIFSQYTRMLDIIGHVLKSMKVKFNRIDGSVTRHQDRT 776 Query: 99 CTIQEWNEG-KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 + E+NE KI + G GLNL + ++ ++ +Q ++R Sbjct: 777 QLVDEFNENEKIKCFILSSQAGGVGLNL-VSASRVIIVDANFNPSIDEQSVDRC-----Y 830 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQ 191 + G K V VY LI+ TI+E + +R +K+T+ Sbjct: 831 RIGQKENVIVYRLISAGTIEEYIYKRQVSKTTVS 864 >gi|224104242|ref|XP_002313369.1| chromatin remodeling complex subunit [Populus trichocarpa] gi|222849777|gb|EEE87324.1| chromatin remodeling complex subunit [Populus trichocarpa] Length = 1748 Score = 89.6 bits (221), Expect = 3e-16, Method: Composition-based stats. Identities = 35/233 (15%), Positives = 83/233 (35%), Gaps = 37/233 (15%) Query: 2 KQYHK--FQR---ELYCDLQGENIEAFNSASKTVKCLQLA----------NGAVYYDEEK 46 KQY+K +R +L ++G + N + KC G + ++ Sbjct: 855 KQYYKWILERNFHDLNKGVRGNQVSLLNIVVELKKCCNHPFLFESADHGYGGDISTNDSS 914 Query: 47 HWKEV--HDEKIKALEVIIEKANAAP--IIVAYHFNSDLARLQKAF---------PQGRT 93 + + K+ L+ ++ + + +++ L + + G T Sbjct: 915 KLERIILSSGKLVILDKLLVRLHETKHRVLIFSQMVRMLDIIAQYMSLRGFQFQRLDGST 974 Query: 94 LDK-DPCTIQEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 + ++ +N + G G+NL + ++ F W+ + Q + R Sbjct: 975 KAELRQQAMEHFNAPGSDDFCFLLSTRAGGLGINL-ATADTVIIFDSDWNPQNDLQAMSR 1033 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETI 203 + G + V +Y + +++E +L+R + K + L++ L E Sbjct: 1034 -----AHRIGQQEVVNIYRFVTSKSVEEDILERAKKKMVLDHLVIQKLNAEGR 1081 >gi|213404686|ref|XP_002173115.1| ISWI chromatin-remodeling complex ATPase ISW2 [Schizosaccharomyces japonicus yFS275] gi|212001162|gb|EEB06822.1| ISWI chromatin-remodeling complex ATPase ISW2 [Schizosaccharomyces japonicus yFS275] Length = 913 Score = 89.6 bits (221), Expect = 3e-16, Method: Composition-based stats. Identities = 31/164 (18%), Positives = 63/164 (38%), Gaps = 20/164 (12%) Query: 44 EEKHWKEVHDEKIKALEVIIEK-ANAAPIIVAYHFNSDLARLQKA----------FPQGR 92 E W + K+ L+ ++ + I+V F L L+ A Sbjct: 736 EGTPWMQT--AKVLRLQKLLNEFKKDDRILVFSQFTQVLDILEFALKSMDVKYLRMDGST 793 Query: 93 TLDKDPCTIQEW-NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERI 151 ++ I + + K L + G G+NL N+++ + ++ + Q +R Sbjct: 794 PVETRQGLIDMFSTKPKYKLFLLSTKAGGFGINLT-AANVVIMYDCSFNPFDDLQAEDR- 851 Query: 152 GVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 + G R V +Y L+ +NTIDE + + K ++ ++ Sbjct: 852 ----AHRVGQTRPVSIYRLVTENTIDENIQKLAFAKLALESSMV 891 >gi|68468819|ref|XP_721468.1| hypothetical protein CaO19.2969 [Candida albicans SC5314] gi|68469363|ref|XP_721196.1| hypothetical protein CaO19.10486 [Candida albicans SC5314] gi|46443104|gb|EAL02388.1| hypothetical protein CaO19.10486 [Candida albicans SC5314] gi|46443387|gb|EAL02669.1| hypothetical protein CaO19.2969 [Candida albicans SC5314] Length = 852 Score = 89.6 bits (221), Expect = 3e-16, Method: Composition-based stats. Identities = 26/167 (15%), Positives = 56/167 (33%), Gaps = 23/167 (13%) Query: 45 EKHWKEVHDEKIKALEV----IIEKANAAPIIVAYHFNSDLARLQKAFPQG--------- 91 W+ KI+AL + + IV F S L +Q + Sbjct: 674 GGEWR--SSTKIEALVEELYKLRSDRHTIKSIVFSQFTSMLDLIQWRLKRAGFNTVKLSG 731 Query: 92 --RTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIE 149 +D ++ + + G LNL + + WW+ Q ++ Sbjct: 732 SMSPQQRDNTIKHFMENTEVEVFLVSLKAGGVALNLCE-ASQVFLMDPWWNPSVEWQSMD 790 Query: 150 RIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 R+ + G KR + + +++I+ +++ K+ + +N Sbjct: 791 RV-----HRIGQKRPIRITRFCIEDSIESKIIELQEKKANMIHATIN 832 >gi|320168818|gb|EFW45717.1| Rad54b protein [Capsaspora owczarzaki ATCC 30864] Length = 988 Score = 89.2 bits (220), Expect = 3e-16, Method: Composition-based stats. Identities = 32/156 (20%), Positives = 59/156 (37%), Gaps = 21/156 (13%) Query: 54 EKIKALEVI---IEKANAAPIIVAYHFNSDLARLQKA-----FPQGRTLDKDPCT----- 100 K+ AL I I++ +++ ++ L L+K F R P Sbjct: 668 CKMAALAQILCTIKRDTTDRVVIVSNYTQTLDHLEKLCAAYEFSFARLDGSTPTAKRQPI 727 Query: 101 IQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQ 158 ++ +N + + G GLNL G L+ W+ Q + R+ + Sbjct: 728 VEAFNSKYSTDYVFLLSSKAGGVGLNL-VGACRLILVDTDWNPANDLQAMARVW-----R 781 Query: 159 AGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 G R V +Y ++ +IDE + QR +K + + Sbjct: 782 DGQTRTVHLYRMLLTGSIDEKIYQRQLSKQGLSVAV 817 >gi|302786754|ref|XP_002975148.1| hypothetical protein SELMODRAFT_102849 [Selaginella moellendorffii] gi|300157307|gb|EFJ23933.1| hypothetical protein SELMODRAFT_102849 [Selaginella moellendorffii] Length = 1017 Score = 89.2 bits (220), Expect = 3e-16, Method: Composition-based stats. Identities = 34/171 (19%), Positives = 69/171 (40%), Gaps = 20/171 (11%) Query: 41 YYDEEKHWKEVHDEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQ---------KAFP 89 Y ++ K + L+ ++ K +++ + L+ Sbjct: 632 YEPRDRDEIIRASGKFELLDRLLPKLQKTGHRVLLFSQMTRLMDLLEMYLTTRGFTYLRL 691 Query: 90 QGRTLDKDP-CTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 G T +D +Q +N P + + G GLNLQ + ++ F W+ + QQ Sbjct: 692 DGTTKTEDRGKKLQMFNAEDSPYFMFLLSTRAGGLGLNLQT-ADTVIIFDSDWNPQMDQQ 750 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 +R + G K+ V V+ L++ +I+E +L+R ++K I ++ A Sbjct: 751 AEDR-----AHRIGQKKEVHVFVLVSVGSIEEEILERAKSKMGIDAKVIQA 796 >gi|294658800|ref|XP_461131.2| DEHA2F17732p [Debaryomyces hansenii CBS767] gi|202953393|emb|CAG89514.2| DEHA2F17732p [Debaryomyces hansenii] Length = 1295 Score = 89.2 bits (220), Expect = 3e-16, Method: Composition-based stats. Identities = 32/161 (19%), Positives = 65/161 (40%), Gaps = 20/161 (12%) Query: 53 DEKIKALEVIIEK--ANAAPIIVAYH------FNSDLAR---LQKAFPQGRTLDKDPCT- 100 K + L+ ++ K A+ +++ + D R ++ G T +D Sbjct: 828 SGKFELLDRVLPKFKASGHRVLIFFQMTQVMNIMEDFLRWRDMKYLRLDGATKAEDRQDM 887 Query: 101 IQEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQ 158 ++++N + G GLNLQ + ++ F W+ + Q R + Sbjct: 888 LKDFNAPNSDYFCFLLSTRAGGLGLNLQT-ADTVIIFDTDWNPHQDLQA-----QDRAHR 941 Query: 159 AGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 G K V + LI ++++E++L+R K I ++ A K Sbjct: 942 IGQKNEVRILRLITNDSVEEVILERAHQKLDIDGKVIQAGK 982 >gi|328865462|gb|EGG13848.1| myb domain-containing protein [Dictyostelium fasciculatum] Length = 1157 Score = 89.2 bits (220), Expect = 3e-16, Method: Composition-based stats. Identities = 31/218 (14%), Positives = 76/218 (34%), Gaps = 31/218 (14%) Query: 4 YHKFQRELYCDLQGENIEAFNSASKTVK-CLQL---ANGAVYYD-------EEKHWKEVH 52 Y + + L G ++ + K + C+QL N +D + Sbjct: 462 YKSLLTKDFEALHGIGVKGGSGKVKLLNICMQLRKACNHPYLFDGAEEQPYTTGEHIIDN 521 Query: 53 DEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQKAF----------PQGRTLDKDPCT 100 K+ L+ ++ + + +++ L L+ G + Sbjct: 522 SGKMVMLDRLLARLKQRGSRVLIFSQMARMLDILEDYMMYRDYKYCRIDGGTDSESRENN 581 Query: 101 IQEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQ 158 I+ +N ++ + G G+ L +I+V F W+ + Q R + Sbjct: 582 IETFNAPGSELFAFLLTTRAGGLGITL-NTADIVVLFDSDWNPQVDLQA-----QDRAHR 635 Query: 159 AGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 G + V VY + +++++E ++++ K + ++ Sbjct: 636 IGQTKPVTVYRFVTESSMEEKMVEKAEMKLHLDAAVIQ 673 >gi|322698671|gb|EFY90439.1| SNF2 family helicase/ATPase, putative [Metarhizium acridum CQMa 102] Length = 1104 Score = 89.2 bits (220), Expect = 3e-16, Method: Composition-based stats. Identities = 29/175 (16%), Positives = 63/175 (36%), Gaps = 19/175 (10%) Query: 44 EEKHWKEVHDEKI-KALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQG----------- 91 K + + KI + +++ +A IV F S L ++ + Sbjct: 881 SGKQTQVLASAKIREVTKILHAEAKEHKFIVFSQFTSMLDLVEPFLDKDGFEYARYDGSM 940 Query: 92 RTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERI 151 + D++ + + +L GLNL ++ +W+ +Q I+R+ Sbjct: 941 KNDDREESLRRLREDQSTRVLLCSLKCGSLGLNLT-AATRVIIVEPFWNPFVEEQAIDRV 999 Query: 152 GVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN-ALKKETIHV 205 + V VY L +T++E ++ K + + + KKE + + Sbjct: 1000 -----HRLTQTVDVVVYKLTVADTVEERIIDLQNKKRELAEQTIEGGAKKEAMKL 1049 >gi|297461261|ref|XP_609360.4| PREDICTED: chromodomain helicase DNA binding protein 5 [Bos taurus] Length = 2048 Score = 89.2 bits (220), Expect = 3e-16, Method: Composition-based stats. Identities = 22/160 (13%), Positives = 54/160 (33%), Gaps = 20/160 (12%) Query: 45 EKHWKEVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQ----------KAFPQGR 92 + K+ L+ +++K +++ L L+ + G Sbjct: 1052 DGSSLVKSSGKLMLLQKMLKKLRDEGHRVLIFSQMTKMLDLLEDFLEYEGYKYERIDGGI 1111 Query: 93 TLDKDPCTIQEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 T I +N + + G G+NL + ++ + W+ Q Sbjct: 1112 TGGLRQEAIDRFNAPGAQQFCFLLSTRAGGLGINL-ATADTVIIYDSDWNPHNDIQA--- 1167 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 +R + G + V +Y + + +++E + Q + K + Sbjct: 1168 --FSRAHRIGQNKKVMIYRFVTRASVEERITQVAKRKMML 1205 >gi|297484148|ref|XP_002694217.1| PREDICTED: chromodomain helicase DNA binding protein 5 [Bos taurus] gi|296479122|gb|DAA21237.1| chromodomain helicase DNA binding protein 5 [Bos taurus] Length = 2099 Score = 89.2 bits (220), Expect = 3e-16, Method: Composition-based stats. Identities = 22/160 (13%), Positives = 54/160 (33%), Gaps = 20/160 (12%) Query: 45 EKHWKEVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQ----------KAFPQGR 92 + K+ L+ +++K +++ L L+ + G Sbjct: 1103 DGSSLVKSSGKLMLLQKMLKKLRDEGHRVLIFSQMTKMLDLLEDFLEYEGYKYERIDGGI 1162 Query: 93 TLDKDPCTIQEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 T I +N + + G G+NL + ++ + W+ Q Sbjct: 1163 TGGLRQEAIDRFNAPGAQQFCFLLSTRAGGLGINL-ATADTVIIYDSDWNPHNDIQA--- 1218 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 +R + G + V +Y + + +++E + Q + K + Sbjct: 1219 --FSRAHRIGQNKKVMIYRFVTRASVEERITQVAKRKMML 1256 >gi|119498495|ref|XP_001266005.1| RSC complex subunit (Sth1), putative [Neosartorya fischeri NRRL 181] gi|119414169|gb|EAW24108.1| RSC complex subunit (Sth1), putative [Neosartorya fischeri NRRL 181] Length = 1405 Score = 89.2 bits (220), Expect = 3e-16, Method: Composition-based stats. Identities = 31/159 (19%), Positives = 63/159 (39%), Gaps = 20/159 (12%) Query: 55 KIKALEVIIE--KANAAPIIVAYHFNSD---------LARLQKAFPQGRTLDKDPCTI-Q 102 K + L+ I+ +A +++ + L ++ G T D + + Sbjct: 848 KFELLDRILPKFRATGHRVLMFFQMTQIMNIMEDFLRLRGMKYLRLDGSTKSDDRSDLLK 907 Query: 103 EWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 +N + + G GLNLQ + ++ F W+ + Q R + G Sbjct: 908 LFNAPGSEYFCFLLSTRAGGLGLNLQT-ADTVIIFDSDWNPHQDLQA-----QDRAHRIG 961 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 K V + LI+ N+++E +L+R + K + ++ A K Sbjct: 962 QKNEVRILRLISSNSVEEKILERAQFKLDMDGKVIQAGK 1000 >gi|328720228|ref|XP_001950291.2| PREDICTED: lymphoid-specific helicase-like [Acyrthosiphon pisum] Length = 759 Score = 89.2 bits (220), Expect = 3e-16, Method: Composition-based stats. Identities = 26/138 (18%), Positives = 53/138 (38%), Gaps = 16/138 (11%) Query: 58 ALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPA 117 L +IE+ ++ F RL + ++ + ++ Sbjct: 563 QLMDVIEE-----FLMFRKF--SFTRLDGTM---SIQLRVDAMTTFNSDPECFIMMISTR 612 Query: 118 SCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 + G GLNL + ++ F W+ + Q +R + G + V VY ++NTID Sbjct: 613 AGGLGLNLT-SADTVILFDSDWNPQVDLQAQDRC-----HRMGQTKPVVVYRFCSKNTID 666 Query: 178 ELVLQRLRTKSTIQDLLL 195 E +L K ++ +++ Sbjct: 667 ERILNFATAKRKLEKMII 684 >gi|299471324|emb|CBN79280.1| CHROMODOMAIN HELICASE DNA BINDING [Ectocarpus siliculosus] Length = 2463 Score = 89.2 bits (220), Expect = 3e-16, Method: Composition-based stats. Identities = 26/172 (15%), Positives = 58/172 (33%), Gaps = 20/172 (11%) Query: 44 EEKHWKEVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQKAF-----PQGRTLDK 96 E+K H K+ L+ ++ + +++ F L L+ P GR Sbjct: 1140 EDKEHLVKHSGKLVLLDKLLPRLKQQGHRVLLFSQFKIMLNILEDYLIASGIPYGRIDGS 1199 Query: 97 -----DPCTIQEWNEGKIPLL--FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIE 149 I + + + G G+ L + + + W+ + Q Sbjct: 1200 IQGNLRQKAIDSFQAPDSDMFVMLLSTKAGGVGITLT-AADTCIIYDSDWNPQNDVQAQA 1258 Query: 150 RIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 R + G ++V VY L+ T + + + K + +L++ + + Sbjct: 1259 RC-----HRIGQTKSVKVYRLLVAKTYEMHMFKTASKKLGLDQAVLSSSRPQ 1305 >gi|145532411|ref|XP_001451961.1| hypothetical protein [Paramecium tetraurelia strain d4-2] gi|124419638|emb|CAK84564.1| unnamed protein product [Paramecium tetraurelia] Length = 1135 Score = 89.2 bits (220), Expect = 3e-16, Method: Composition-based stats. Identities = 24/165 (14%), Positives = 63/165 (38%), Gaps = 18/165 (10%) Query: 53 DEKIKALEVIIEKA-NAAPIIVAYHFNSDLARLQKAFPQGRTL----------DKDPCTI 101 KI+ + I++ ++ F + ++ + + + Sbjct: 967 SSKIEKVMQILDAIPKNEKCVIFTQFIGMIQMIEFDLDNQKIKHLRLDGSMPQQERAEVL 1026 Query: 102 QEW-NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 + + + + + + G GLNL N ++ WW+ +Q IER+ + G Sbjct: 1027 KTFKEDDEYRIFIISLKAGGVGLNLT-SANHVIMIDPWWNPAVEEQAIERV-----YRIG 1080 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIHV 205 + VY LI + T++E +++ K + + + ++ ++ + Sbjct: 1081 QTKETHVYRLICKQTVEERMIKLHDVKKQLFESSIRTEERSSLRM 1125 >gi|311258360|ref|XP_003127576.1| PREDICTED: chromodomain-helicase-DNA-binding protein 5-like [Sus scrofa] Length = 1824 Score = 89.2 bits (220), Expect = 3e-16, Method: Composition-based stats. Identities = 22/160 (13%), Positives = 54/160 (33%), Gaps = 20/160 (12%) Query: 45 EKHWKEVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQ----------KAFPQGR 92 + K+ L+ +++K +++ L L+ + G Sbjct: 977 DGSSLVKSSGKLMLLQKMLKKLRDEGHRVLIFSQMTKMLDLLEDFLEYEGYKYERIDGGI 1036 Query: 93 TLDKDPCTIQEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 T I +N + + G G+NL + ++ + W+ Q Sbjct: 1037 TGGLRQEAIDRFNAPGAQQFCFLLSTRAGGLGINL-ATADTVIIYDSDWNPHNDIQA--- 1092 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 +R + G + V +Y + + +++E + Q + K + Sbjct: 1093 --FSRAHRIGQNKKVMIYRFVTRASVEERITQVAKRKMML 1130 >gi|58259855|ref|XP_567340.1| DNA repair protein RAD5 [Cryptococcus neoformans var. neoformans JEC21] gi|134116468|ref|XP_773188.1| hypothetical protein CNBJ1830 [Cryptococcus neoformans var. neoformans B-3501A] gi|50255809|gb|EAL18541.1| hypothetical protein CNBJ1830 [Cryptococcus neoformans var. neoformans B-3501A] gi|57229390|gb|AAW45823.1| DNA repair protein RAD5, putative [Cryptococcus neoformans var. neoformans JEC21] Length = 1359 Score = 89.2 bits (220), Expect = 3e-16, Method: Composition-based stats. Identities = 29/154 (18%), Positives = 58/154 (37%), Gaps = 21/154 (13%) Query: 65 KANAAPI----IVAYHFNSDLARLQKAFPQGR----------TLDKDPCTIQEWN-EGKI 109 A P+ IV + + L R+ + T D+ I + + Sbjct: 1199 DAEGKPVVTKSIVFSQWTTMLDRIADMLDETNIRYARLDGTMTRDERSKAIDALKFKKNV 1258 Query: 110 PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYY 169 +L + G GLNL + +W+ Q I+RI + G R V Sbjct: 1259 EVLLVSTRAGGVGLNLTV-ASRCYLVDPYWNPSVESQAIDRI-----HRMGQTRPVVAIK 1312 Query: 170 LIAQNTIDELVLQRLRTKSTIQDLLLNALKKETI 203 L+ +++I+E + + + K+ + L L + ++ + Sbjct: 1313 LMIKDSIEEKLDKIQKKKAELAQLSLKNMSRKEL 1346 >gi|67525031|ref|XP_660577.1| hypothetical protein AN2973.2 [Aspergillus nidulans FGSC A4] gi|40744368|gb|EAA63544.1| hypothetical protein AN2973.2 [Aspergillus nidulans FGSC A4] gi|259486081|tpe|CBF83639.1| TPA: SNF2 family helicase/ATPase, putative (AFU_orthologue; AFUA_3G08400) [Aspergillus nidulans FGSC A4] Length = 1107 Score = 89.2 bits (220), Expect = 3e-16, Method: Composition-based stats. Identities = 33/162 (20%), Positives = 66/162 (40%), Gaps = 19/162 (11%) Query: 46 KHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFP---------QGRTL 94 K+ + + K+ L ++ + N ++V F + L+ G T Sbjct: 918 KNNEWMDSGKVDKLCELLRRFKENGDRVLVFSQFRLAMDILEVVLENQHLKFVRLDGTTS 977 Query: 95 DKDPCTIQE-WNEG-KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIG 152 +D +I + ++E IP+ + G G+NL N ++ F ++ +E Q Sbjct: 978 VEDRQSIMDTFHENTDIPVFLLSTKAGGAGINL-ACANKVIIFDSSFNPQEDVQA----- 1031 Query: 153 VTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 R + G R V V L+ ++TI+E + +TK + + Sbjct: 1032 ENRAHRVGQTREVEVIRLVTKDTIEEQIYALGQTKLALDQAV 1073 >gi|157134600|ref|XP_001663323.1| chromodomain helicase DNA binding protein [Aedes aegypti] gi|108870421|gb|EAT34646.1| chromodomain helicase DNA binding protein [Aedes aegypti] Length = 1983 Score = 89.2 bits (220), Expect = 3e-16, Method: Composition-based stats. Identities = 24/150 (16%), Positives = 53/150 (35%), Gaps = 20/150 (13%) Query: 55 KIKALEVIIEKA--NAAPIIVAYHFNSDLARLQ----------KAFPQGRTLDKDPCTIQ 102 K+ LE ++++ +++ L L+ + G T I Sbjct: 1047 KLVLLEKMLKQLKEQGHRVLIFSQMTKMLDILEDFLEGFGYKYERIDGGITGTLRQEAID 1106 Query: 103 EWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 +N + + G G+NL + ++ + W+ Q +R + G Sbjct: 1107 RFNAPGAQQFCFLLSTKAGGLGINL-ATADTVIIYDSDWNPHNDIQA-----FSRAHRIG 1160 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 V +Y + +N+++E V Q + K + Sbjct: 1161 QANKVMIYRFVTRNSVEERVTQVAKRKMML 1190 >gi|325118047|emb|CBZ53598.1| hypothetical protein NCLIV_033850 [Neospora caninum Liverpool] Length = 1613 Score = 89.2 bits (220), Expect = 3e-16, Method: Composition-based stats. Identities = 42/222 (18%), Positives = 86/222 (38%), Gaps = 38/222 (17%) Query: 6 KFQRELYCDLQGENIEAFNSAS-----KTVKCLQL---ANGAVYYD---------EEKHW 48 K Q++LY D+ +N+E N+ S +QL N +D E +H Sbjct: 458 KLQKKLYADILSKNVEVLNAMSGSKTQMLNILMQLRKCCNHPYLFDGVEPGPPYVEGEHM 517 Query: 49 KEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQ---------KAFPQGRTLDKD 97 E K+ L+ ++ + A + +++ L + G T + Sbjct: 518 VEAA-GKMALLDKLLPRLKAEGSRVLLFSQMTRLLDIVDDYCRWRGFDYCRIDGGTPGTE 576 Query: 98 PCT-IQEWNE--GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 I E+N L + G G+NL ++++ F ++ + Q ++R Sbjct: 577 RQERIDEFNAEGSSKFLFLLSTRAGGLGINL-ATADVVILFDSDFNPQMDLQAMDR---- 631 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + G K+ V VY + +T++ +++R K + L++ Sbjct: 632 -AHRIGQKKRVVVYRFVTGDTVEAKIVERAAKKLKLDSLVIQ 672 >gi|302902557|ref|XP_003048670.1| SNF2 family DNA-dependent ATPase [Nectria haematococca mpVI 77-13-4] gi|256729604|gb|EEU42957.1| SNF2 family DNA-dependent ATPase [Nectria haematococca mpVI 77-13-4] Length = 773 Score = 89.2 bits (220), Expect = 3e-16, Method: Composition-based stats. Identities = 22/141 (15%), Positives = 56/141 (39%), Gaps = 18/141 (12%) Query: 67 NAAPIIVAYHFNSDLARLQK-----------AFPQGRTLDKDPCTIQEWN-EGKIPLLFA 114 + +++ F + L L+ + + I ++N + + + Sbjct: 551 DDHKVLIFSQFTTQLDILEDYCRELRGWNVCRIDGSVSQESRRTQIADFNTDPEYKVFLL 610 Query: 115 HPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQN 174 + G G+NL + ++ F ++ ++ Q +R + G R V V+ L ++ Sbjct: 611 STRAGGQGINL-ASADTVILFDSDFNPQQDLQAQDRC-----HRIGQTRPVVVFRLATKD 664 Query: 175 TIDELVLQRLRTKSTIQDLLL 195 T++E +L K ++ L++ Sbjct: 665 TVEESLLLSADAKRRLEKLVI 685 >gi|302791571|ref|XP_002977552.1| hypothetical protein SELMODRAFT_176282 [Selaginella moellendorffii] gi|300154922|gb|EFJ21556.1| hypothetical protein SELMODRAFT_176282 [Selaginella moellendorffii] Length = 1032 Score = 89.2 bits (220), Expect = 3e-16, Method: Composition-based stats. Identities = 34/171 (19%), Positives = 69/171 (40%), Gaps = 20/171 (11%) Query: 41 YYDEEKHWKEVHDEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQ---------KAFP 89 Y ++ K + L+ ++ K +++ + L+ Sbjct: 632 YEPRDRDEIIRASGKFELLDRLLPKLQKTGHRVLLFSQMTRLMDLLEMYLTTRGFTYLRL 691 Query: 90 QGRTLDKDP-CTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 G T +D +Q +N P + + G GLNLQ + ++ F W+ + QQ Sbjct: 692 DGTTKTEDRGKKLQMFNAEDSPYFMFLLSTRAGGLGLNLQT-ADTVIIFDSDWNPQMDQQ 750 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 +R + G K+ V V+ L++ +I+E +L+R ++K I ++ A Sbjct: 751 AEDR-----AHRIGQKKEVHVFVLVSVGSIEEEILERAKSKMGIDAKVIQA 796 >gi|241948421|ref|XP_002416933.1| DNA repair protein RAD16-homologue, putative; RAD family ATP-dependent helicase, putative [Candida dubliniensis CD36] gi|223640271|emb|CAX44521.1| DNA repair protein RAD16-homologue, putative [Candida dubliniensis CD36] Length = 846 Score = 89.2 bits (220), Expect = 3e-16, Method: Composition-based stats. Identities = 25/167 (14%), Positives = 56/167 (33%), Gaps = 23/167 (13%) Query: 45 EKHWKEVHDEKIKALEV----IIEKANAAPIIVAYHFNSDLARLQKAFPQG--------- 91 W+ KI+AL + + IV F S L ++ + Sbjct: 668 GGEWR--SSTKIEALVEELYKLRSDRHTIKSIVFSQFTSMLDLIEWRLKRAGFNTVKLSG 725 Query: 92 --RTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIE 149 +D ++ + + G LNL + + WW+ Q ++ Sbjct: 726 SMSPQQRDNTIKHFMENTEVEVFLVSLKAGGVALNLCE-ASQVFLMDPWWNPSVEWQSMD 784 Query: 150 RIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 R+ + G KR + + +++I+ +++ K+ + +N Sbjct: 785 RV-----HRIGQKRPIRITRFCIEDSIESKIIELQEKKANMIHATIN 826 >gi|302682272|ref|XP_003030817.1| hypothetical protein SCHCODRAFT_68280 [Schizophyllum commune H4-8] gi|300104509|gb|EFI95914.1| hypothetical protein SCHCODRAFT_68280 [Schizophyllum commune H4-8] Length = 761 Score = 89.2 bits (220), Expect = 3e-16, Method: Composition-based stats. Identities = 32/160 (20%), Positives = 59/160 (36%), Gaps = 21/160 (13%) Query: 52 HDEKIKALEV----IIEKANAAPIIVAYHFNSDLA----RLQKAF-------PQGRTLDK 96 KI+AL + ++ IV F + L RLQ+A + Sbjct: 588 SSTKIEALVEELSALRQQDATTKSIVFSQFVNFLDLVAFRLQRAGFAVCRLEGTMSPQAR 647 Query: 97 DPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 D +P+ + G LNL + + WW+ Q ++RI Sbjct: 648 DATIKHFMTNVDVPVFLVSLKAGGVALNLTE-ASRVYLMDSWWNPAVEYQAMDRI----- 701 Query: 157 RQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + G +R V L+ +++I+ ++Q K+ + D L+ Sbjct: 702 HRLGQRRPVQAIKLVVEDSIESRIVQLQEKKAAMVDATLS 741 >gi|109475885|ref|XP_001078944.1| PREDICTED: chromodomain helicase DNA binding protein 5 [Rattus norvegicus] Length = 1951 Score = 89.2 bits (220), Expect = 3e-16, Method: Composition-based stats. Identities = 22/160 (13%), Positives = 54/160 (33%), Gaps = 20/160 (12%) Query: 45 EKHWKEVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQ----------KAFPQGR 92 + K+ L+ +++K +++ L L+ + G Sbjct: 1013 DGSSLVKSSGKLMLLQKMLKKLRDEGHRVLIFSQMTKMLDLLEDFLEYEGYKYERIDGGI 1072 Query: 93 TLDKDPCTIQEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 T I +N + + G G+NL + ++ + W+ Q Sbjct: 1073 TGGLRQEAIDRFNAPGAQQFCFLLSTRAGGLGINL-ATADTVIIYDSDWNPHNDIQA--- 1128 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 +R + G + V +Y + + +++E + Q + K + Sbjct: 1129 --FSRAHRIGQNKKVMIYRFVTRASVEERITQVAKRKMML 1166 >gi|24308089|ref|NP_056372.1| chromodomain-helicase-DNA-binding protein 5 [Homo sapiens] gi|51701343|sp|Q8TDI0|CHD5_HUMAN RecName: Full=Chromodomain-helicase-DNA-binding protein 5; Short=CHD-5; AltName: Full=ATP-dependent helicase CHD5 gi|19773960|gb|AAL98962.1|AF425231_1 chromodomain helicase DNA binding protein 5 [Homo sapiens] gi|56203111|emb|CAI19450.1| chromodomain helicase DNA binding protein 5 [Homo sapiens] gi|56417878|emb|CAI19891.1| chromodomain helicase DNA binding protein 5 [Homo sapiens] gi|119591922|gb|EAW71516.1| chromodomain helicase DNA binding protein 5 [Homo sapiens] gi|148922387|gb|AAI46382.1| Chromodomain helicase DNA binding protein 5 [synthetic construct] gi|151555557|gb|AAI48804.1| Chromodomain helicase DNA binding protein 5 [synthetic construct] gi|261857536|dbj|BAI45290.1| Chromodomain-helicase-DNA-binding protein 5 [synthetic construct] Length = 1954 Score = 89.2 bits (220), Expect = 3e-16, Method: Composition-based stats. Identities = 22/160 (13%), Positives = 54/160 (33%), Gaps = 20/160 (12%) Query: 45 EKHWKEVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQ----------KAFPQGR 92 + K+ L+ +++K +++ L L+ + G Sbjct: 1015 DGSSLVKSSGKLMLLQKMLKKLRDEGHRVLIFSQMTKMLDLLEDFLEYEGYKYERIDGGI 1074 Query: 93 TLDKDPCTIQEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 T I +N + + G G+NL + ++ + W+ Q Sbjct: 1075 TGGLRQEAIDRFNAPGAQQFCFLLSTRAGGLGINL-ATADTVIIYDSDWNPHNDIQA--- 1130 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 +R + G + V +Y + + +++E + Q + K + Sbjct: 1131 --FSRAHRIGQNKKVMIYRFVTRASVEERITQVAKRKMML 1168 >gi|312211271|emb|CBX91356.1| hypothetical protein [Leptosphaeria maculans] Length = 1199 Score = 89.2 bits (220), Expect = 3e-16, Method: Composition-based stats. Identities = 24/140 (17%), Positives = 50/140 (35%), Gaps = 19/140 (13%) Query: 66 ANAAPIIVAYHFNSDLARLQKAFPQGRTL------------DKDPCTIQEWN-EGKIPLL 112 +N +++ H L L+ F T ++ + ++N + + Sbjct: 664 SNGDKVLIFSHSVRLLRLLKGLFDVYGTKYNFSYLDGSMKYEERSKAVADFNADANQFVF 723 Query: 113 FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIA 172 + G GLN+ +++ W+ Q R + G R V V+ L++ Sbjct: 724 LISTKAGGVGLNITSANKVVIM-DPNWNPAHDLQA-----QDRAYRIGQTRDVEVFRLVS 777 Query: 173 QNTIDELVLQRLRTKSTIQD 192 T++E+V R K + Sbjct: 778 SGTVEEVVYARQIYKQQQAN 797 >gi|151941373|gb|EDN59744.1| conserved protein [Saccharomyces cerevisiae YJM789] Length = 1131 Score = 89.2 bits (220), Expect = 3e-16, Method: Composition-based stats. Identities = 31/177 (17%), Positives = 65/177 (36%), Gaps = 22/177 (12%) Query: 41 YYDEEKHWKEVHDEKIKALEVIIEK---ANAAPIIVAYHFNSDLARLQK----------A 87 Y W + KI AL+ +++ +++ F L L+ Sbjct: 938 YQLHNDEWMQ--SGKIDALKKLLKTIIVDKQEKVLIFSLFTQVLDILEMVLSTLDYKFLR 995 Query: 88 FPQGRTLDKDPCTIQEWNEGK-IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 ++ I ++ E K IP+ + G G+NL N+++F + Sbjct: 996 LDGSTQVNDRQLLIDKFYEDKDIPIFILSTKAGGFGINLVCANNVIIFD------QSFNP 1049 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETI 203 +R R + G + V + LI +++I+E + Q + K + + K + + Sbjct: 1050 HDDRQAADRAHRVGQTKEVNITTLITKDSIEEKIHQLAKNKLALDSYISEDKKSQDV 1106 >gi|330919879|ref|XP_003298794.1| hypothetical protein PTT_09611 [Pyrenophora teres f. teres 0-1] gi|311327831|gb|EFQ93101.1| hypothetical protein PTT_09611 [Pyrenophora teres f. teres 0-1] Length = 1239 Score = 89.2 bits (220), Expect = 3e-16, Method: Composition-based stats. Identities = 28/166 (16%), Positives = 59/166 (35%), Gaps = 18/166 (10%) Query: 47 HWKEVHDEKIKALEVIIEKANA-APIIVAYHFNSDLARLQKAFPQG-----------RTL 94 KI+ L I+ + +IV F S L ++ + R Sbjct: 1003 RPSLTPSTKIRQLLAILSQETPSHKVIVFSQFTSMLDLIEPFLRRASYTYTRYDGSMRND 1062 Query: 95 DKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 ++ + ++ +L GLNL + +V +W+ +Q I+R+ Sbjct: 1063 HREASLHKLRSDPHTRVLLCSLKCGSLGLNLT-AASRVVIMEPFWNPFVEEQAIDRV--- 1118 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKK 200 + V VY L +++++E +L+ K + + + K Sbjct: 1119 --HRLNQTVDVTVYRLSIRDSVEERILELQEAKRKLANAAIEGGKA 1162 >gi|225557592|gb|EEH05878.1| transcription termination factor 2 [Ajellomyces capsulatus G186AR] Length = 1092 Score = 89.2 bits (220), Expect = 3e-16, Method: Composition-based stats. Identities = 37/173 (21%), Positives = 66/173 (38%), Gaps = 20/173 (11%) Query: 41 YYDEEKHWKEVHDEKIKALEVIIEKANAAPI--IVAYHFNSDLARLQKAFPQGR------ 92 Y K + + +E + + API IV + S L ++ A Sbjct: 907 YEGPHTKTKALISHLLDTIEESKKAPDEAPIKSIVFSSWTSHLDLIEIAMEDNGITTFTR 966 Query: 93 -----TLDKDPCTIQEWNEGK-IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 TL + I + E + +L A + G GLNL G + + ++ Q Sbjct: 967 LDGTMTLKQRNAAIDAFREDDNVTILLATLGAGGVGLNLTAGSRVYIM-EPQYNPAAIAQ 1025 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 ++R+ + G R V I +++I+E + + R K + D+ LN K Sbjct: 1026 AVDRV-----HRLGQTREVTTIQFIMKDSIEEKIAELARKKQQMADMSLNRGK 1073 >gi|213405915|ref|XP_002173729.1| DNA repair protein rad5 [Schizosaccharomyces japonicus yFS275] gi|212001776|gb|EEB07436.1| DNA repair protein rad5 [Schizosaccharomyces japonicus yFS275] Length = 1108 Score = 89.2 bits (220), Expect = 3e-16, Method: Composition-based stats. Identities = 28/150 (18%), Positives = 58/150 (38%), Gaps = 17/150 (11%) Query: 56 IKALEVIIEKANAAPIIVAYHFNSDLARLQK----------AFPQGRTLDKDPCTIQEWN 105 +K L + E+ +++ F + L + F + ++ + Sbjct: 945 LKHLRRVFEEHKDEKVVIFSQFTTFLDYISTLLHSQGIEHTRFDGSMSQIARANALEHFR 1004 Query: 106 EGKIP-LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA 164 + K +L + G GLNL N + WW Q ++R+ + G ++A Sbjct: 1005 DSKTSNVLIVSLKAGGVGLNLTC-ANHVYLMDPWWSWSVEAQALDRV-----HRLGQEKA 1058 Query: 165 VFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 V V I +++++E +L+ K+ I L Sbjct: 1059 VHVTRFIIRDSVEERMLKIQERKNFIAGTL 1088 >gi|167385507|ref|XP_001737376.1| DNA repair and recombination protein RAD54B [Entamoeba dispar SAW760] gi|165899842|gb|EDR26336.1| DNA repair and recombination protein RAD54B, putative [Entamoeba dispar SAW760] Length = 764 Score = 89.2 bits (220), Expect = 3e-16, Method: Composition-based stats. Identities = 35/170 (20%), Positives = 70/170 (41%), Gaps = 24/170 (14%) Query: 45 EKHWKEVHDEKIKALEVIIEKANAAPIIVA-YHFNSDLARL----------QKAFPQGRT 93 + + I+ ++ II K+ ++V+ Y DL + +K F R Sbjct: 511 NEESSNKFNITIQFIKEIIIKSKEKVVLVSNYTKTLDLFEMYFKQEEEYKQKKIFNYLRL 570 Query: 94 LDKDPC-----TIQEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 K +++ N+ +L + G GLNL G + L+ F W+ + +Q Sbjct: 571 DGKTSQKQRDIIVEKINDKSSNFNILLLSSKAGGVGLNL-IGCSRLILFDPDWNPAKDKQ 629 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + RI + G ++ +Y ++ TI+E + QR K+ I + ++ Sbjct: 630 AMARIW-----RDGQQKKAMIYRMLCTGTIEEKIYQRQLQKNQISESIIE 674 >gi|119498441|ref|XP_001265978.1| SNF2 family helicase, putative [Neosartorya fischeri NRRL 181] gi|119414142|gb|EAW24081.1| SNF2 family helicase, putative [Neosartorya fischeri NRRL 181] Length = 928 Score = 89.2 bits (220), Expect = 3e-16, Method: Composition-based stats. Identities = 49/201 (24%), Positives = 79/201 (39%), Gaps = 26/201 (12%) Query: 5 HKFQRELYCDLQGENIEAFNSASK-TVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVII 63 +R+ C L NI+ ++ V + AN V D KI+AL I+ Sbjct: 712 QVIERQHKCPLCRANIDDTSTLVAPAVDLGESANDDVDADPNN-----PSSKIEALIKIL 766 Query: 64 EKANAAP---IIVAYHFNSDLA----RLQKAFPQGRTLD-------KDPCTIQEWNEGKI 109 AP +V + S L LQ+ +D +D T + + + Sbjct: 767 TAQGQAPDTKTVVFSQWTSFLTLVEPHLQRHGIGYARIDGSMKSTARDASTYKFSKDPQC 826 Query: 110 PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYY 169 +L A + C GLNL N + WW Q ++R+ + G KR V+ Sbjct: 827 KVLLASLSVCSVGLNL-VAANQAILADSWWAPAIEDQAVDRV-----YRLGQKRETTVWR 880 Query: 170 LIAQNTIDELVLQRLRTKSTI 190 L+ +NTI++ VL+ TK + Sbjct: 881 LVMENTIEDRVLEIQDTKRKL 901 >gi|2443887|gb|AAB71480.1| Similar to transcription factor gb|Z46606|1658307 and others [Arabidopsis thaliana] Length = 1272 Score = 89.2 bits (220), Expect = 3e-16, Method: Composition-based stats. Identities = 26/128 (20%), Positives = 50/128 (39%), Gaps = 17/128 (13%) Query: 68 AAPIIVAYHFNSDLARLQKA----FPQGRTLDKD------PCTIQEWNE-GKIPLLFAHP 116 IV + L L+ + Q R LD +Q++N ++ ++ Sbjct: 1130 GEKAIVFSQWTKMLNLLEASLVSSHIQYRRLDGTMSVAARDKAVQDFNTLPEVTVMIMSL 1189 Query: 117 ASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTI 176 + GLN+ ++L+ LWW+ Q I+R + G R V V ++T+ Sbjct: 1190 KAASLGLNMVAACHVLML-DLWWNPTTEDQAIDR-----AHRIGQTRPVTVVRFTVKDTV 1243 Query: 177 DELVLQRL 184 ++ +L Sbjct: 1244 EDRILALQ 1251 >gi|73956748|ref|XP_546747.2| PREDICTED: similar to chromodomain helicase DNA binding protein 5 [Canis familiaris] Length = 1994 Score = 89.2 bits (220), Expect = 3e-16, Method: Composition-based stats. Identities = 22/160 (13%), Positives = 54/160 (33%), Gaps = 20/160 (12%) Query: 45 EKHWKEVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQ----------KAFPQGR 92 + K+ L+ +++K +++ L L+ + G Sbjct: 1060 DGSSLVKSSGKLMLLQKMLKKLRDEGHRVLIFSQMTKMLDLLEDFLEYEGYKYERIDGGI 1119 Query: 93 TLDKDPCTIQEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 T I +N + + G G+NL + ++ + W+ Q Sbjct: 1120 TGGLRQEAIDRFNAPGAQQFCFLLSTRAGGLGINL-ATADTVIIYDSDWNPHNDIQA--- 1175 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 +R + G + V +Y + + +++E + Q + K + Sbjct: 1176 --FSRAHRIGQNKKVMIYRFVTRASVEERITQVAKRKMML 1213 >gi|255553699|ref|XP_002517890.1| conserved hypothetical protein [Ricinus communis] gi|223542872|gb|EEF44408.1| conserved hypothetical protein [Ricinus communis] Length = 870 Score = 89.2 bits (220), Expect = 3e-16, Method: Composition-based stats. Identities = 35/198 (17%), Positives = 71/198 (35%), Gaps = 20/198 (10%) Query: 14 DLQGENIEAFNSASKTVKCLQLANGAVYYDEE-KHWKEVHDEKIKALEVIIEK--ANAAP 70 + + +A +++ + L G + H K++ALE ++ + Sbjct: 496 EPDKQRKDAEFASAVFGPDIDLVGGNAQTESFMGLSDVKHCGKMRALEKLMCSWASRGDK 555 Query: 71 IIVAYHFNSDLARLQK----------AFPQGRTLDKDPCTIQEWNE-GKIPLLFAHPASC 119 +++ + L L+K + + ++N + + Sbjct: 556 LLLFSYSVRMLDILEKFVIRKGYSFSRLDGSTPTNLRQSMVDDFNSSPSKQVFLISTRAG 615 Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 G GLNL N +V F W+ Q R + G KR V V+ L+A + +EL Sbjct: 616 GLGLNL-VSANRVVIFDPNWNPAYDLQA-----QDRSFRFGQKRHVVVFRLLAAGSFEEL 669 Query: 180 VLQRLRTKSTIQDLLLNA 197 V R K + ++ ++ Sbjct: 670 VYSRQVYKQQLSNIAVSG 687 >gi|238498532|ref|XP_002380501.1| chromodomain helicase (Chd1), putative [Aspergillus flavus NRRL3357] gi|220693775|gb|EED50120.1| chromodomain helicase (Chd1), putative [Aspergillus flavus NRRL3357] Length = 1446 Score = 89.2 bits (220), Expect = 3e-16, Method: Composition-based stats. Identities = 30/151 (19%), Positives = 59/151 (39%), Gaps = 20/151 (13%) Query: 51 VHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQKAFP-QGRTLDK---------DP 98 K+ L+ ++ K + +++ L L + +G T + Sbjct: 754 TSSGKMMLLDQLLAKLKRDGHRVLIFSQMVKMLDLLGEYMEFRGYTYQRLDGTIPAASRR 813 Query: 99 CTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 I+ +N + G G+NL + +V F W+ + Q + R Sbjct: 814 LAIEHYNAPGSSDFAFILSTRAGGLGINLMT-ADTVVLFDSDWNPQADLQAMAR-----A 867 Query: 157 RQAGFKRAVFVYYLIAQNTIDELVLQRLRTK 187 + G R V VY L++++T++E V++R R K Sbjct: 868 HRIGQTRPVSVYRLVSKDTVEEEVIERARNK 898 >gi|156403967|ref|XP_001640179.1| predicted protein [Nematostella vectensis] gi|156227312|gb|EDO48116.1| predicted protein [Nematostella vectensis] Length = 1552 Score = 89.2 bits (220), Expect = 3e-16, Method: Composition-based stats. Identities = 34/160 (21%), Positives = 63/160 (39%), Gaps = 20/160 (12%) Query: 52 HDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQKAF---------PQGRTLDKDP-C 99 K + L+ I+ K N +++ S + L+ F G T +D Sbjct: 970 ASGKFELLDRILPKLKRNKHRVLMFCQMTSLMTILEDYFNWKGFPYLRLDGTTKSEDRGQ 1029 Query: 100 TIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 + +N P + + G GLNLQ + +V F W+ + Q R Sbjct: 1030 LLSLFNAKDSPYFVFLLSTRAGGLGLNLQ-AADTVVIFDSDWNPHQDLQA-----QDRAH 1083 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + G ++ V V L+ N+++E +L R K + + ++ A Sbjct: 1084 RIGQEKEVRVLRLMTVNSVEEKILAAARYKLNVDEKVIQA 1123 >gi|326475388|gb|EGD99397.1| SNF2 family helicase/ATPase [Trichophyton tonsurans CBS 112818] Length = 1143 Score = 89.2 bits (220), Expect = 3e-16, Method: Composition-based stats. Identities = 36/163 (22%), Positives = 67/163 (41%), Gaps = 21/163 (12%) Query: 45 EKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFP---------QGRT 93 K W ++ K+ L +++ AN I+V F + L++ G+T Sbjct: 950 NKEW--MNSGKVDKLCELLDNYIANGDRILVFSQFTMVMDILEQVLETQKIKFFRLDGKT 1007 Query: 94 LDKDPCTI-QEWNEG-KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERI 151 +D +I ++E IP+ + G G+NL N ++ F ++ +E Q Sbjct: 1008 SVEDRQSILDAFHEQVDIPVFMLSTKAGGAGINL-ACANKVIIFDSSFNPQEDIQA---- 1062 Query: 152 GVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 R + G R V V L+ + TI+E + +TK + + Sbjct: 1063 -ENRAHRVGQTREVEVVRLVTRGTIEEQIHALGQTKLALDQRV 1104 >gi|317155731|ref|XP_001825326.2| chromodomain helicase (Chd1) [Aspergillus oryzae RIB40] Length = 1513 Score = 89.2 bits (220), Expect = 3e-16, Method: Composition-based stats. Identities = 30/151 (19%), Positives = 59/151 (39%), Gaps = 20/151 (13%) Query: 51 VHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQKAFP-QGRTLDK---------DP 98 K+ L+ ++ K + +++ L L + +G T + Sbjct: 754 TSSGKMMLLDQLLAKLKRDGHRVLIFSQMVKMLDLLGEYMEFRGYTYQRLDGTIPAASRR 813 Query: 99 CTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 I+ +N + G G+NL + +V F W+ + Q + R Sbjct: 814 LAIEHYNAPGSSDFAFILSTRAGGLGINLMT-ADTVVLFDSDWNPQADLQAMAR-----A 867 Query: 157 RQAGFKRAVFVYYLIAQNTIDELVLQRLRTK 187 + G R V VY L++++T++E V++R R K Sbjct: 868 HRIGQTRPVSVYRLVSKDTVEEEVIERARNK 898 >gi|255940126|ref|XP_002560832.1| Pc16g04810 [Penicillium chrysogenum Wisconsin 54-1255] gi|211585455|emb|CAP93151.1| Pc16g04810 [Penicillium chrysogenum Wisconsin 54-1255] Length = 1488 Score = 89.2 bits (220), Expect = 3e-16, Method: Composition-based stats. Identities = 32/151 (21%), Positives = 60/151 (39%), Gaps = 20/151 (13%) Query: 51 VHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQKAFP----QGRTLDKD------P 98 K+ L+ ++ K + +++ L L + + + LD Sbjct: 739 TSSGKMMLLDQLLRKLSVDGHRVLIFCQMVGMLNILSEYMEYRGYKYQRLDGTIPSAARR 798 Query: 99 CTIQEWNE-GKIPL-LFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 I+ +N G + G G+NL + +V F W+ + Q + R Sbjct: 799 LAIEHYNAPGSTDFAFLLSTRAGGLGINLMT-ADTVVLFDSDWNPQADLQAMAR-----A 852 Query: 157 RQAGFKRAVFVYYLIAQNTIDELVLQRLRTK 187 + G R V VY L++++TI+E V++R R K Sbjct: 853 HRIGQTRPVSVYRLVSKDTIEEEVIERARNK 883 >gi|301776989|ref|XP_002923917.1| PREDICTED: chromodomain-helicase-DNA-binding protein 5-like [Ailuropoda melanoleuca] Length = 1948 Score = 89.2 bits (220), Expect = 3e-16, Method: Composition-based stats. Identities = 22/160 (13%), Positives = 54/160 (33%), Gaps = 20/160 (12%) Query: 45 EKHWKEVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQ----------KAFPQGR 92 + K+ L+ +++K +++ L L+ + G Sbjct: 1014 DGSSLVKSSGKLMLLQKMLKKLRDEGHRVLIFSQMTKMLDLLEDFLEYEGYKYERIDGGI 1073 Query: 93 TLDKDPCTIQEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 T I +N + + G G+NL + ++ + W+ Q Sbjct: 1074 TGGLRQEAIDRFNAPGAQQFCFLLSTRAGGLGINL-ATADTVIIYDSDWNPHNDIQA--- 1129 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 +R + G + V +Y + + +++E + Q + K + Sbjct: 1130 --FSRAHRIGQNKKVMIYRFVTRASVEERITQVAKRKMML 1167 >gi|258564262|ref|XP_002582876.1| hypothetical protein UREG_07649 [Uncinocarpus reesii 1704] gi|237908383|gb|EEP82784.1| hypothetical protein UREG_07649 [Uncinocarpus reesii 1704] Length = 1123 Score = 89.2 bits (220), Expect = 3e-16, Method: Composition-based stats. Identities = 35/162 (21%), Positives = 69/162 (42%), Gaps = 19/162 (11%) Query: 46 KHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFN-------SDLARLQKAF--PQGRTL 94 K+ + ++ K++ L +++K N ++V F L LQ F G T Sbjct: 927 KNDEWMNSGKVEKLCELLKKFTENGDRVLVFSQFTMVMDILEHVLETLQIRFFRLDGTTS 986 Query: 95 DKDPCTIQE--WNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIG 152 +D +I + + + IP+ + G G+NL N ++ F ++ ++ Q Sbjct: 987 VEDRQSILDAFYEQVDIPVFMLSTKAGGAGINL-ACANKVIIFDSSFNPQDDIQA----- 1040 Query: 153 VTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 R + G R V V L+ ++TI+E + +TK + + Sbjct: 1041 ENRAHRVGQTREVEVVRLVTKDTIEEQIYALGQTKLVLDQRV 1082 >gi|224093501|ref|XP_002309928.1| chromatin remodeling complex subunit [Populus trichocarpa] gi|222852831|gb|EEE90378.1| chromatin remodeling complex subunit [Populus trichocarpa] Length = 1108 Score = 89.2 bits (220), Expect = 3e-16, Method: Composition-based stats. Identities = 25/146 (17%), Positives = 55/146 (37%), Gaps = 19/146 (13%) Query: 56 IKALEVIIEKANAAPIIVAYHFNSDLARLQKAF---------PQGRTLDKDP-CTIQEWN 105 + L+ +I + +++ L ++++ G T D + ++ Sbjct: 759 LSLLDNLIPE--GHNVLIFSQTRKMLNLIEESLVSNGYEFLRIDGTTKVTDRAKIVDDFQ 816 Query: 106 EGK-IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA 164 EG P+ G GL L + ++ W+ Q ++R + G K+ Sbjct: 817 EGNGAPIFLLTSQVGGLGLTLTK-ADRVIVVDPAWNPSTDNQSVDR-----AYRIGQKKD 870 Query: 165 VFVYYLIAQNTIDELVLQRLRTKSTI 190 V VY L+ T++E + ++ K + Sbjct: 871 VVVYRLMTCGTVEEKIYRKQIFKGGL 896 >gi|238494326|ref|XP_002378399.1| SNF2 family helicase, putative [Aspergillus flavus NRRL3357] gi|220695049|gb|EED51392.1| SNF2 family helicase, putative [Aspergillus flavus NRRL3357] Length = 942 Score = 89.2 bits (220), Expect = 3e-16, Method: Composition-based stats. Identities = 40/200 (20%), Positives = 75/200 (37%), Gaps = 25/200 (12%) Query: 5 HKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIE 64 +R+ C + I ++ + + + AV D + KI+AL I+ Sbjct: 725 QVIERQHKCPMCRAEITDTSTLVEPAVEMGESTEAVVADPD-----TPSSKIEALIKILT 779 Query: 65 K---ANAAPIIVAYHFNSDLARLQKAFP-----------QGRTLDKDPCTIQEWNEGKIP 110 A +V + S L L+ + +L +D T + ++ Sbjct: 780 AQGQAPGTKTVVFSQWTSFLNLLEPHLNRYGVGFARVDGKMSSLARDNSTYRFSHDPNCK 839 Query: 111 LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYL 170 +L A + C GLNL N + WW Q ++R+ + G R V+ L Sbjct: 840 VLLASLSVCSVGLNL-VAANQAILADSWWAPAIEDQAVDRV-----YRLGQTRETTVWRL 893 Query: 171 IAQNTIDELVLQRLRTKSTI 190 + +++I++ VL TK + Sbjct: 894 VMEDSIEDRVLAIQETKRKL 913 >gi|118092751|ref|XP_421656.2| PREDICTED: similar to excision repair protein [Gallus gallus] Length = 1495 Score = 89.2 bits (220), Expect = 3e-16, Method: Composition-based stats. Identities = 35/172 (20%), Positives = 63/172 (36%), Gaps = 21/172 (12%) Query: 43 DEEKHWKEVHDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQK----------AFPQ 90 D+ +WK K+ +E +++ ++ L L+ Sbjct: 826 DQFGYWKR--SGKMIVVESLLKIWHKQGHRVLFFTQSRQMLQILEVFLRDRNYSYLRMDG 883 Query: 91 GRTLDKDPCTIQEWNEGK-IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIE 149 T+ I +NE K I + G G+NL G + ++ + W+ Q E Sbjct: 884 TTTIASRQPLITRYNEDKSIFIFLLTTRVGGIGVNLT-GADRVIIYDPDWNPSTDTQARE 942 Query: 150 RIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 R + G K+ V VY L+ TI+E + R K + + +L K+ Sbjct: 943 RAW-----RIGQKKQVTVYRLLTAGTIEEKIYHRQIFKQFLTNRVLKDPKQR 989 >gi|293347835|ref|XP_002726667.1| PREDICTED: chromodomain helicase DNA binding protein 5 [Rattus norvegicus] Length = 1927 Score = 89.2 bits (220), Expect = 3e-16, Method: Composition-based stats. Identities = 22/160 (13%), Positives = 54/160 (33%), Gaps = 20/160 (12%) Query: 45 EKHWKEVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQ----------KAFPQGR 92 + K+ L+ +++K +++ L L+ + G Sbjct: 989 DGSSLVKSSGKLMLLQKMLKKLRDEGHRVLIFSQMTKMLDLLEDFLEYEGYKYERIDGGI 1048 Query: 93 TLDKDPCTIQEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 T I +N + + G G+NL + ++ + W+ Q Sbjct: 1049 TGGLRQEAIDRFNAPGAQQFCFLLSTRAGGLGINL-ATADTVIIYDSDWNPHNDIQA--- 1104 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 +R + G + V +Y + + +++E + Q + K + Sbjct: 1105 --FSRAHRIGQNKKVMIYRFVTRASVEERITQVAKRKMML 1142 >gi|159126264|gb|EDP51380.1| RSC complex subunit (Sth1), putative [Aspergillus fumigatus A1163] Length = 1406 Score = 89.2 bits (220), Expect = 3e-16, Method: Composition-based stats. Identities = 31/159 (19%), Positives = 63/159 (39%), Gaps = 20/159 (12%) Query: 55 KIKALEVIIE--KANAAPIIVAYHFNSD---------LARLQKAFPQGRTLDKDPCTI-Q 102 K + L+ I+ +A +++ + L ++ G T D + + Sbjct: 849 KFELLDRILPKFRATGHRVLMFFQMTQIMNIMEDFLRLRGMKYLRLDGSTKSDDRSDLLK 908 Query: 103 EWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 +N + + G GLNLQ + ++ F W+ + Q R + G Sbjct: 909 LFNAPGSEYFCFLLSTRAGGLGLNLQT-ADTVIIFDSDWNPHQDLQA-----QDRAHRIG 962 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 K V + LI+ N+++E +L+R + K + ++ A K Sbjct: 963 QKNEVRILRLISSNSVEEKILERAQFKLDMDGKVIQAGK 1001 >gi|158300661|ref|XP_320523.4| AGAP012009-PA [Anopheles gambiae str. PEST] gi|157013268|gb|EAA00692.4| AGAP012009-PA [Anopheles gambiae str. PEST] Length = 2037 Score = 89.2 bits (220), Expect = 3e-16, Method: Composition-based stats. Identities = 26/150 (17%), Positives = 53/150 (35%), Gaps = 20/150 (13%) Query: 55 KIKALEVIIE--KANAAPIIVAYHFNSDLARLQ----------KAFPQGRTLDKDPCTIQ 102 K+ LE ++ K+ +++ L L+ + G T I Sbjct: 1096 KLVLLEKMLRLLKSQGHRVLIFSQMTKMLDILEDFLEGLGYKYERIDGGITGSIRQEAID 1155 Query: 103 EWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 +N P + G G+NL + ++ + W+ Q +R + G Sbjct: 1156 RFNAPGAPQFCFLLSTRAGGLGINL-ATADTVIIYDSDWNPHNDIQA-----FSRAHRIG 1209 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 V +Y + +N+++E V Q + K + Sbjct: 1210 QANKVMIYRFVTRNSVEERVTQVAKRKMML 1239 >gi|256272274|gb|EEU07259.1| Fun30p [Saccharomyces cerevisiae JAY291] Length = 1131 Score = 89.2 bits (220), Expect = 3e-16, Method: Composition-based stats. Identities = 31/177 (17%), Positives = 65/177 (36%), Gaps = 22/177 (12%) Query: 41 YYDEEKHWKEVHDEKIKALEVIIEK---ANAAPIIVAYHFNSDLARLQK----------A 87 Y W + KI AL+ +++ +++ F L L+ Sbjct: 938 YQLHNDEWMQ--SGKIDALKKLLKTIIVDKQEKVLIFSLFTQVLDILEMVLSTLDYKFLR 995 Query: 88 FPQGRTLDKDPCTIQEWNEGK-IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 ++ I ++ E K IP+ + G G+NL N+++F + Sbjct: 996 LDGSTQVNDRQLLIDKFYEDKDIPIFILSTKAGGFGINLVCANNVIIFD------QSFNP 1049 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETI 203 +R R + G + V + LI +++I+E + Q + K + + K + + Sbjct: 1050 HDDRQAADRAHRVGQTKEVNITTLITKDSIEEKIHQLAKNKLALDSYISEDKKSQDV 1106 >gi|294657478|ref|XP_459783.2| DEHA2E10934p [Debaryomyces hansenii CBS767] gi|199432721|emb|CAG88022.2| DEHA2E10934p [Debaryomyces hansenii] Length = 1157 Score = 89.2 bits (220), Expect = 3e-16, Method: Composition-based stats. Identities = 27/174 (15%), Positives = 61/174 (35%), Gaps = 31/174 (17%) Query: 53 DEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQK----------------------AF 88 K++ L+ +++ + ++ L L+K Sbjct: 706 SGKLQVLKNLLQLWQMQGHRTLLFCQTKQMLDILEKFVTNLPSLNENGEEVRGTFNYLRM 765 Query: 89 PQGRTLDKDPCTIQEWNEGKI-PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQM 147 + + + +NE K + G G+NL G + ++ + W+ Q Sbjct: 766 DGSTNIGRRQALVDTFNEDKQYHVFLLTTKVGGLGINLT-GADRVIIYDPDWNPSTDIQA 824 Query: 148 IERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 ER + G K+ + +Y L+ +I+E + R K+ + + +L K+ Sbjct: 825 RERAW-----RLGQKKDITIYRLMTAGSIEEKIYHRQIFKTFLTNKILKDPKQR 873 >gi|190406667|gb|EDV09934.1| hypothetical protein SCRG_05653 [Saccharomyces cerevisiae RM11-1a] gi|259144692|emb|CAY77633.1| Fun30p [Saccharomyces cerevisiae EC1118] Length = 1131 Score = 89.2 bits (220), Expect = 3e-16, Method: Composition-based stats. Identities = 31/177 (17%), Positives = 65/177 (36%), Gaps = 22/177 (12%) Query: 41 YYDEEKHWKEVHDEKIKALEVIIEK---ANAAPIIVAYHFNSDLARLQK----------A 87 Y W + KI AL+ +++ +++ F L L+ Sbjct: 938 YQLHNDEWMQ--SGKIDALKKLLKTIIVDKQEKVLIFSLFTQVLDILEMVLSTLDYKFLR 995 Query: 88 FPQGRTLDKDPCTIQEWNEGK-IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 ++ I ++ E K IP+ + G G+NL N+++F + Sbjct: 996 LDGSTQVNDRQLLIDKFYEDKDIPIFILSTKAGGFGINLVCANNVIIFD------QSFNP 1049 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETI 203 +R R + G + V + LI +++I+E + Q + K + + K + + Sbjct: 1050 HDDRQAADRAHRVGQTKEVNITTLITKDSIEEKIHQLAKNKLALDSYISEDKKSQDV 1106 >gi|157871612|ref|XP_001684355.1| DNA repair protein [Leishmania major strain Friedlin] gi|68127424|emb|CAJ05152.1| putative DNA repair protein [Leishmania major strain Friedlin] Length = 736 Score = 89.2 bits (220), Expect = 3e-16, Method: Composition-based stats. Identities = 33/160 (20%), Positives = 63/160 (39%), Gaps = 21/160 (13%) Query: 53 DEKIKA-LEVIIEKANAAP---IIVAYHFNSDLARLQKAFPQGRT----------LDKDP 98 K++ L I + P +I+ F S + + A + L Sbjct: 503 STKLRMVLRSIYDMQKNHPADKMIIFSQFTSFMDVISVALDRYNIAFLRIDGTMSLSNRN 562 Query: 99 CTIQEWNEGK-IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 I+++ + I ++ A + G GLNL +++V WW+ +Q + R Sbjct: 563 AVIRQFQTSEHIKIVLASKTATGVGLNLTAANHVVV-VDPWWNPAIEEQAVHRC-----Y 616 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + G K+ V+V I +TI++ + + K D +L A Sbjct: 617 RIGQKKPVYVTRFIIADTIEQYCYEICQRKKEFGDAVLRA 656 >gi|6319300|ref|NP_009383.1| Fun30p [Saccharomyces cerevisiae S288c] gi|401438|sp|P31380|FUN30_YEAST RecName: Full=Uncharacterized ATP-dependent helicase FUN30 gi|171856|gb|AAC04938.1| Fun30p [Saccharomyces cerevisiae] gi|285810183|tpg|DAA06969.1| TPA: Fun30p [Saccharomyces cerevisiae S288c] Length = 1131 Score = 89.2 bits (220), Expect = 3e-16, Method: Composition-based stats. Identities = 31/177 (17%), Positives = 65/177 (36%), Gaps = 22/177 (12%) Query: 41 YYDEEKHWKEVHDEKIKALEVIIEK---ANAAPIIVAYHFNSDLARLQK----------A 87 Y W + KI AL+ +++ +++ F L L+ Sbjct: 938 YQLHNDEWMQ--SGKIDALKKLLKTIIVDKQEKVLIFSLFTQVLDILEMVLSTLDYKFLR 995 Query: 88 FPQGRTLDKDPCTIQEWNEGK-IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 ++ I ++ E K IP+ + G G+NL N+++F + Sbjct: 996 LDGSTQVNDRQLLIDKFYEDKDIPIFILSTKAGGFGINLVCANNVIIFD------QSFNP 1049 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETI 203 +R R + G + V + LI +++I+E + Q + K + + K + + Sbjct: 1050 HDDRQAADRAHRVGQTKEVNITTLITKDSIEEKIHQLAKNKLALDSYISEDKKSQDV 1106 >gi|66358754|ref|XP_626555.1| SWI/SNF related transcriptional regulator ATpase [Cryptosporidium parvum Iowa II] gi|46227736|gb|EAK88656.1| SWI/SNF related putative transcriptional regulator ATpase [Cryptosporidium parvum Iowa II] Length = 1552 Score = 89.2 bits (220), Expect = 3e-16, Method: Composition-based stats. Identities = 37/215 (17%), Positives = 83/215 (38%), Gaps = 26/215 (12%) Query: 3 QYHKFQRELY--CDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVH----DEKI 56 Y + +++ DL I+ + ++ ++ ++ N + EE ++ K Sbjct: 833 VYDQIKQKAVHSMDLSSGKIQYRSVSNTIMQLRKIVNHPYLFVEEYLIEDDDIFRVSCKF 892 Query: 57 KALEVIIEKA--NAAPIIVAYHFNS---------DLARLQKAFPQGR-TLDKDPCTIQEW 104 + L+ ++ K +++ D ++ G T+ + + E+ Sbjct: 893 EVLDRMLPKLIRFRHKVLIFCQMTQLMDILGDFLDYRGIEHHRLDGTMTIQERKEKMDEF 952 Query: 105 NEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFK 162 N + + G GLNLQ + ++ F W+ + Q +R + G K Sbjct: 953 NSPDSEKFVFVLSTRAGGLGLNLQ-AADTVIIFDSDWNPHQDLQA-----QSRAHRMGQK 1006 Query: 163 RAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 V V ++ + ++ELVL+R + K I ++ A Sbjct: 1007 NEVRVLRFVSISGVEELVLKRAQKKLEIDHKIIQA 1041 >gi|301607806|ref|XP_002933489.1| PREDICTED: chromodomain-helicase-DNA-binding protein 1-like [Xenopus (Silurana) tropicalis] Length = 1708 Score = 89.2 bits (220), Expect = 3e-16, Method: Composition-based stats. Identities = 26/153 (16%), Positives = 56/153 (36%), Gaps = 21/153 (13%) Query: 68 AAPIIVAYHFNSDLARLQKAFP---------QGRTLDK-DPCTIQEWN-EGKIPL-LFAH 115 +++ L L + G + + +N EG Sbjct: 715 GNRVLIFSQMVRMLDILAEYLKSRQFPFQRLDGSIKGEVRKQALDHFNAEGSEDFCFLLS 774 Query: 116 PASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNT 175 + G G+NL + +V F W+ + Q R + G K+ V +Y L+ + + Sbjct: 775 TRAGGLGINL-ASADTVVIFDSDWNPQNDLQAQAR-----AHRIGQKKQVNIYRLVTKGS 828 Query: 176 IDELVLQRLRTKSTIQDLL---LNALKKETIHV 205 ++E +++R + K + L+ ++ K +H Sbjct: 829 VEEDIIERAKKKMVLDHLVIQRMDTTGKTVLHT 861 >gi|292622418|ref|XP_685699.4| PREDICTED: chromodomain-helicase-DNA-binding protein 4 isoform 1 [Danio rerio] Length = 1953 Score = 89.2 bits (220), Expect = 3e-16, Method: Composition-based stats. Identities = 20/136 (14%), Positives = 46/136 (33%), Gaps = 18/136 (13%) Query: 67 NAAPIIVAYHFNSDLARLQ----------KAFPQGRTLDKDPCTIQEWNEGKIP--LLFA 114 +++ L L+ + G T I +N P + Sbjct: 1075 GGHRVLIFSQMTKMLDLLEDFLENEGYKYERIDGGVTGGMRQEAIDRFNAPGAPQFVFLL 1134 Query: 115 HPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQN 174 + G G+NL + ++ + W+ Q +R + G + V +Y + + Sbjct: 1135 STRAGGLGINL-ATADTVIIYDSDWNPHNDIQA-----FSRAHRIGQNKKVMIYRFVTKA 1188 Query: 175 TIDELVLQRLRTKSTI 190 +++E + Q + K + Sbjct: 1189 SVEERITQVAKKKMML 1204 >gi|70998556|ref|XP_754000.1| RSC complex subunit (Sth1) [Aspergillus fumigatus Af293] gi|66851636|gb|EAL91962.1| RSC complex subunit (Sth1), putative [Aspergillus fumigatus Af293] Length = 1406 Score = 89.2 bits (220), Expect = 3e-16, Method: Composition-based stats. Identities = 31/159 (19%), Positives = 63/159 (39%), Gaps = 20/159 (12%) Query: 55 KIKALEVIIE--KANAAPIIVAYHFNSD---------LARLQKAFPQGRTLDKDPCTI-Q 102 K + L+ I+ +A +++ + L ++ G T D + + Sbjct: 849 KFELLDRILPKFRATGHRVLMFFQMTQIMNIMEDFLRLRGMKYLRLDGSTKSDDRSDLLK 908 Query: 103 EWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 +N + + G GLNLQ + ++ F W+ + Q R + G Sbjct: 909 LFNAPGSEYFCFLLSTRAGGLGLNLQT-ADTVIIFDSDWNPHQDLQA-----QDRAHRIG 962 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 K V + LI+ N+++E +L+R + K + ++ A K Sbjct: 963 QKNEVRILRLISSNSVEEKILERAQFKLDMDGKVIQAGK 1001 >gi|317418651|emb|CBN80689.1| Chromodomain-helicase-DNA-binding protein 5 [Dicentrarchus labrax] Length = 1981 Score = 89.2 bits (220), Expect = 3e-16, Method: Composition-based stats. Identities = 19/136 (13%), Positives = 45/136 (33%), Gaps = 18/136 (13%) Query: 67 NAAPIIVAYHFNSDLARLQ----------KAFPQGRTLDKDPCTIQEWNEG--KIPLLFA 114 +++ L L+ + G T I +N + Sbjct: 1022 EGHRVLIFSQMTKMLDLLEDFLEFEGYKYERIDGGITGGLRQEAIDRFNAPGAQQFCFLL 1081 Query: 115 HPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQN 174 + G G+NL + ++ + W+ Q +R + G + V +Y + + Sbjct: 1082 STRAGGLGINL-ASADTVIIYDSDWNPHNDIQA-----FSRAHRIGQNKKVMIYRFVTRG 1135 Query: 175 TIDELVLQRLRTKSTI 190 +++E + Q + K + Sbjct: 1136 SVEERITQVAKRKMML 1151 >gi|297736923|emb|CBI26124.3| unnamed protein product [Vitis vinifera] Length = 2266 Score = 89.2 bits (220), Expect = 3e-16, Method: Composition-based stats. Identities = 31/157 (19%), Positives = 60/157 (38%), Gaps = 20/157 (12%) Query: 55 KIKALEVIIEK--ANAAPIIVAYHFNSDLARLQK--AFPQGRTL--------DKDPCTIQ 102 K++ L+ ++ K A ++ L +++ + Q R L I+ Sbjct: 1369 KLEMLDRLLPKLKATDHRVLFFSTMTRLLDVMEEYLHWKQYRYLRLDGHTSGGDRGALIE 1428 Query: 103 EWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 ++N+ P + + G G+NLQ + ++ F W+ + Q R + G Sbjct: 1429 QFNQPDSPYFIFLLSIRAGGVGVNLQ-AADTVIIFDTDWNPQVDLQAQAR-----AHRIG 1482 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 KR V V L T++E V K + + + A Sbjct: 1483 QKRDVLVLRLETVQTVEEQVRASAEHKLGVANQSITA 1519 >gi|224004522|ref|XP_002295912.1| ATP-dependent helicase [Thalassiosira pseudonana CCMP1335] gi|209585944|gb|ACI64629.1| ATP-dependent helicase [Thalassiosira pseudonana CCMP1335] Length = 841 Score = 89.2 bits (220), Expect = 3e-16, Method: Composition-based stats. Identities = 32/178 (17%), Positives = 69/178 (38%), Gaps = 20/178 (11%) Query: 32 CLQLANGAVYYDEEKHWKEVH-DEKIKALEVIIEKANAAP--IIVAYHFNSDLARLQKAF 88 ++ + Y + ++ K+K L+ + K ++V + + L +Q+ Sbjct: 388 LREMPGQSYYKSDGIMNDHLNLSGKMKTLDYCLRKYQKKRHRVLVFSYSTATLDLIQQHV 447 Query: 89 P---------QGRTLDKDPCT-IQEWNEGK-IPLLFAHPASCGHGLNLQYGGNILVFFSL 137 G+T + ++ + I + + G GLNL N ++ F + Sbjct: 448 KTQGWTHLRLDGQTATSTRQALVDQFQRDQAIFVFLISTRAGGLGLNLT-AANKVIIFDV 506 Query: 138 WWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 W+ +Q R + G ++ V V L+A+ TI+E + R K+ ++ L Sbjct: 507 NWNPSYDEQA-----QDRSFRIGQEKNVEVLRLVARGTIEEQMYARQVYKTQLKKQTL 559 >gi|330799785|ref|XP_003287922.1| hypothetical protein DICPUDRAFT_55110 [Dictyostelium purpureum] gi|325082056|gb|EGC35551.1| hypothetical protein DICPUDRAFT_55110 [Dictyostelium purpureum] Length = 1271 Score = 89.2 bits (220), Expect = 3e-16, Method: Composition-based stats. Identities = 36/219 (16%), Positives = 82/219 (37%), Gaps = 31/219 (14%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVK-----CLQLANGAVYYDEEKHWKEVH---- 52 K Y + + + G ++ +K +K ++ N + +E++ + + Sbjct: 516 KMYDLIKDKGFTA--GSGLDGNPKLAKGLKNTYVQLRKICNHPYLFYDEEYPIDDNLIRY 573 Query: 53 DEKIKALEVIIEK--ANAAPIIVAYHFNSDLARL---------QKAFPQGRTLDKDPCTI 101 K L+ ++ K A +++ + L + G T ++ + Sbjct: 574 AGKFDLLDRLLPKLKAAGHRVLIFSQMTQLINILEVFFAYRDFKYLRLDGSTKSEERGPL 633 Query: 102 -QEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQ 158 Q +N + + + G GLNLQ + ++ F W+ + Q R + Sbjct: 634 LQLFNAPNSEYFIFVLSTRAGGLGLNLQT-ADTVIIFDSDWNPQMDLQA-----QDRAHR 687 Query: 159 AGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 G K+ V V L+ ++++E +L R K + ++ A Sbjct: 688 IGQKQTVRVLRLVTLHSVEENILARANFKKELDKKIIQA 726 >gi|297682946|ref|XP_002819164.1| PREDICTED: chromodomain-helicase-DNA-binding protein 7-like [Pongo abelii] Length = 2997 Score = 89.2 bits (220), Expect = 3e-16, Method: Composition-based stats. Identities = 34/233 (14%), Positives = 78/233 (33%), Gaps = 42/233 (18%) Query: 2 KQYHK-FQRE-LYCDLQGENIEAFNSASKTVKCLQLANGAVYYDE----------EKHWK 49 K Y ++ + G N + ++ + N + E H Sbjct: 1216 KYYRAILEKNFTFLSKGGGQANVPNLLNTMMELRKCCNHPYLINGAEEKILEEFKETHNA 1275 Query: 50 EVHDEKIKALEV------IIEK------ANAAPIIVAYHFNSDLAR-----LQKAFPQGR 92 E D +++A+ +I+K A +++ L +Q+ +P R Sbjct: 1276 ESPDFQLQAMIQAAGKLVLIDKLLPKLKAGGHRVLIFSQMVRCLDILEDYLIQRRYPYER 1335 Query: 93 TLDK-----DPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQ 145 + I +++ + + G G+NL + + F W+ + Sbjct: 1336 IDGRVRGNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLT-AADTCIIFDSDWNPQNDL 1394 Query: 146 QMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNAL 198 Q R + G ++V +Y LI +N+ + + + K + +L ++ Sbjct: 1395 QAQARC-----HRIGQSKSVKIYRLITRNSYEREMFDKASLKLGLDKAVLQSM 1442 >gi|297299473|ref|XP_002805403.1| PREDICTED: chromodomain-helicase-DNA-binding protein 7-like, partial [Macaca mulatta] Length = 2990 Score = 89.2 bits (220), Expect = 3e-16, Method: Composition-based stats. Identities = 34/233 (14%), Positives = 78/233 (33%), Gaps = 42/233 (18%) Query: 2 KQYHK-FQRE-LYCDLQGENIEAFNSASKTVKCLQLANGAVYYDE----------EKHWK 49 K Y ++ + G N + ++ + N + E H Sbjct: 1245 KYYRAILEKNFTFLSKGGGQANVPNLLNTMMELRKCCNHPYLINGAEEKILEEFKETHNA 1304 Query: 50 EVHDEKIKALEV------IIEK------ANAAPIIVAYHFNSDLAR-----LQKAFPQGR 92 E D +++A+ +I+K A +++ L +Q+ +P R Sbjct: 1305 ESPDFQLQAMIQAAGKLVLIDKLLPKLKAGGHRVLIFSQMVRCLDILEDYLIQRRYPYER 1364 Query: 93 TLDK-----DPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQ 145 + I +++ + + G G+NL + + F W+ + Sbjct: 1365 IDGRVRGNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLT-AADTCIIFDSDWNPQNDL 1423 Query: 146 QMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNAL 198 Q R + G ++V +Y LI +N+ + + + K + +L ++ Sbjct: 1424 QAQARC-----HRIGQSKSVKIYRLITRNSYEREMFDKASLKLGLDKAVLQSM 1471 >gi|296226562|ref|XP_002758984.1| PREDICTED: chromodomain-helicase-DNA-binding protein 7-like isoform 1 [Callithrix jacchus] gi|296226564|ref|XP_002758985.1| PREDICTED: chromodomain-helicase-DNA-binding protein 7-like isoform 2 [Callithrix jacchus] Length = 2994 Score = 89.2 bits (220), Expect = 3e-16, Method: Composition-based stats. Identities = 34/233 (14%), Positives = 78/233 (33%), Gaps = 42/233 (18%) Query: 2 KQYHK-FQRE-LYCDLQGENIEAFNSASKTVKCLQLANGAVYYDE----------EKHWK 49 K Y ++ + G N + ++ + N + E H Sbjct: 1216 KYYRAILEKNFTFLSKGGGQANVPNLLNTMMELRKCCNHPYLINGAEEKILEEFKETHNA 1275 Query: 50 EVHDEKIKALEV------IIEK------ANAAPIIVAYHFNSDLAR-----LQKAFPQGR 92 E D +++A+ +I+K A +++ L +Q+ +P R Sbjct: 1276 ESPDFQLQAMIQAAGKLVLIDKLLPKLKAGGHRVLIFSQMVRCLDILEDYLIQRRYPYER 1335 Query: 93 TLDK-----DPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQ 145 + I +++ + + G G+NL + + F W+ + Sbjct: 1336 IDGRVRGNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLT-AADTCIIFDSDWNPQNDL 1394 Query: 146 QMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNAL 198 Q R + G ++V +Y LI +N+ + + + K + +L ++ Sbjct: 1395 QAQARC-----HRIGQSKSVKIYRLITRNSYEREMFDKASLKLGLDKAVLQSM 1442 >gi|291388024|ref|XP_002710542.1| PREDICTED: chromodomain helicase DNA binding protein 7 [Oryctolagus cuniculus] Length = 2997 Score = 89.2 bits (220), Expect = 3e-16, Method: Composition-based stats. Identities = 34/233 (14%), Positives = 78/233 (33%), Gaps = 42/233 (18%) Query: 2 KQYHK-FQRE-LYCDLQGENIEAFNSASKTVKCLQLANGAVYYDE----------EKHWK 49 K Y ++ + G N + ++ + N + E H Sbjct: 1216 KYYRAILEKNFTFLSKGGGQANVPNLLNTMMELRKCCNHPYLINGAEEKILEEFKETHNA 1275 Query: 50 EVHDEKIKALEV------IIEK------ANAAPIIVAYHFNSDLAR-----LQKAFPQGR 92 E D +++A+ +I+K A +++ L +Q+ +P R Sbjct: 1276 ESPDFQLQAMIQAAGKLVLIDKLLPKLKAGGHRVLIFSQMVRCLDILEDYLIQRRYPYER 1335 Query: 93 TLDK-----DPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQ 145 + I +++ + + G G+NL + + F W+ + Sbjct: 1336 IDGRVRGNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLT-AADTCIIFDSDWNPQNDL 1394 Query: 146 QMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNAL 198 Q R + G ++V +Y LI +N+ + + + K + +L ++ Sbjct: 1395 QAQARC-----HRIGQSKSVKIYRLITRNSYEREMFDKASLKLGLDKAVLQSM 1442 >gi|148673732|gb|EDL05679.1| mCG20155 [Mus musculus] Length = 2985 Score = 89.2 bits (220), Expect = 3e-16, Method: Composition-based stats. Identities = 34/233 (14%), Positives = 78/233 (33%), Gaps = 42/233 (18%) Query: 2 KQYHK-FQRE-LYCDLQGENIEAFNSASKTVKCLQLANGAVYYDE----------EKHWK 49 K Y ++ + G N + ++ + N + E H Sbjct: 1206 KYYRAILEKNFTFLSKGGGQANVPNLLNTMMELRKCCNHPYLINGAEEKILEEFKETHNA 1265 Query: 50 EVHDEKIKALEV------IIEK------ANAAPIIVAYHFNSDLAR-----LQKAFPQGR 92 E D +++A+ +I+K A +++ L +Q+ +P R Sbjct: 1266 ESPDFQLQAMIQAAGKLVLIDKLLPKLKAGGHRVLIFSQMVRCLDILEDYLIQRRYPYER 1325 Query: 93 TLDK-----DPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQ 145 + I +++ + + G G+NL + + F W+ + Sbjct: 1326 IDGRVRGNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLT-AADTCIIFDSDWNPQNDL 1384 Query: 146 QMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNAL 198 Q R + G ++V +Y LI +N+ + + + K + +L ++ Sbjct: 1385 QAQARC-----HRIGQSKSVKIYRLITRNSYEREMFDKASLKLGLDKAVLQSM 1432 >gi|119607236|gb|EAW86830.1| chromodomain helicase DNA binding protein 7, isoform CRA_a [Homo sapiens] gi|119607239|gb|EAW86833.1| chromodomain helicase DNA binding protein 7, isoform CRA_a [Homo sapiens] Length = 3011 Score = 89.2 bits (220), Expect = 3e-16, Method: Composition-based stats. Identities = 34/233 (14%), Positives = 78/233 (33%), Gaps = 42/233 (18%) Query: 2 KQYHK-FQRE-LYCDLQGENIEAFNSASKTVKCLQLANGAVYYDE----------EKHWK 49 K Y ++ + G N + ++ + N + E H Sbjct: 1231 KYYRAILEKNFTFLSKGGGQANVPNLLNTMMELRKCCNHPYLINGAEEKILEEFKETHNA 1290 Query: 50 EVHDEKIKALEV------IIEK------ANAAPIIVAYHFNSDLAR-----LQKAFPQGR 92 E D +++A+ +I+K A +++ L +Q+ +P R Sbjct: 1291 ESPDFQLQAMIQAAGKLVLIDKLLPKLKAGGHRVLIFSQMVRCLDILEDYLIQRRYPYER 1350 Query: 93 TLDK-----DPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQ 145 + I +++ + + G G+NL + + F W+ + Sbjct: 1351 IDGRVRGNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLT-AADTCIIFDSDWNPQNDL 1409 Query: 146 QMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNAL 198 Q R + G ++V +Y LI +N+ + + + K + +L ++ Sbjct: 1410 QAQARC-----HRIGQSKSVKIYRLITRNSYEREMFDKASLKLGLDKAVLQSM 1457 >gi|119607237|gb|EAW86831.1| chromodomain helicase DNA binding protein 7, isoform CRA_b [Homo sapiens] Length = 2996 Score = 89.2 bits (220), Expect = 3e-16, Method: Composition-based stats. Identities = 34/233 (14%), Positives = 78/233 (33%), Gaps = 42/233 (18%) Query: 2 KQYHK-FQRE-LYCDLQGENIEAFNSASKTVKCLQLANGAVYYDE----------EKHWK 49 K Y ++ + G N + ++ + N + E H Sbjct: 1216 KYYRAILEKNFTFLSKGGGQANVPNLLNTMMELRKCCNHPYLINGAEEKILEEFKETHNA 1275 Query: 50 EVHDEKIKALEV------IIEK------ANAAPIIVAYHFNSDLAR-----LQKAFPQGR 92 E D +++A+ +I+K A +++ L +Q+ +P R Sbjct: 1276 ESPDFQLQAMIQAAGKLVLIDKLLPKLKAGGHRVLIFSQMVRCLDILEDYLIQRRYPYER 1335 Query: 93 TLDK-----DPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQ 145 + I +++ + + G G+NL + + F W+ + Sbjct: 1336 IDGRVRGNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLT-AADTCIIFDSDWNPQNDL 1394 Query: 146 QMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNAL 198 Q R + G ++V +Y LI +N+ + + + K + +L ++ Sbjct: 1395 QAQARC-----HRIGQSKSVKIYRLITRNSYEREMFDKASLKLGLDKAVLQSM 1442 >gi|54112403|ref|NP_060250.2| chromodomain-helicase-DNA-binding protein 7 [Homo sapiens] gi|148877246|sp|Q9P2D1|CHD7_HUMAN RecName: Full=Chromodomain-helicase-DNA-binding protein 7; Short=CHD-7; AltName: Full=ATP-dependent helicase CHD7 gi|119607240|gb|EAW86834.1| chromodomain helicase DNA binding protein 7, isoform CRA_d [Homo sapiens] gi|225000838|gb|AAI72443.1| Chromodomain helicase DNA binding protein 7 [synthetic construct] Length = 2997 Score = 89.2 bits (220), Expect = 3e-16, Method: Composition-based stats. Identities = 34/233 (14%), Positives = 78/233 (33%), Gaps = 42/233 (18%) Query: 2 KQYHK-FQRE-LYCDLQGENIEAFNSASKTVKCLQLANGAVYYDE----------EKHWK 49 K Y ++ + G N + ++ + N + E H Sbjct: 1216 KYYRAILEKNFTFLSKGGGQANVPNLLNTMMELRKCCNHPYLINGAEEKILEEFKETHNA 1275 Query: 50 EVHDEKIKALEV------IIEK------ANAAPIIVAYHFNSDLAR-----LQKAFPQGR 92 E D +++A+ +I+K A +++ L +Q+ +P R Sbjct: 1276 ESPDFQLQAMIQAAGKLVLIDKLLPKLKAGGHRVLIFSQMVRCLDILEDYLIQRRYPYER 1335 Query: 93 TLDK-----DPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQ 145 + I +++ + + G G+NL + + F W+ + Sbjct: 1336 IDGRVRGNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLT-AADTCIIFDSDWNPQNDL 1394 Query: 146 QMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNAL 198 Q R + G ++V +Y LI +N+ + + + K + +L ++ Sbjct: 1395 QAQARC-----HRIGQSKSVKIYRLITRNSYEREMFDKASLKLGLDKAVLQSM 1442 >gi|114620586|ref|XP_519780.2| PREDICTED: chromodomain helicase DNA binding protein 7 [Pan troglodytes] Length = 3041 Score = 89.2 bits (220), Expect = 3e-16, Method: Composition-based stats. Identities = 34/233 (14%), Positives = 78/233 (33%), Gaps = 42/233 (18%) Query: 2 KQYHK-FQRE-LYCDLQGENIEAFNSASKTVKCLQLANGAVYYDE----------EKHWK 49 K Y ++ + G N + ++ + N + E H Sbjct: 1260 KYYRAILEKNFTFLSKGGGQANVPNLLNTMMELRKCCNHPYLINGAEEKILEEFKETHNA 1319 Query: 50 EVHDEKIKALEV------IIEK------ANAAPIIVAYHFNSDLAR-----LQKAFPQGR 92 E D +++A+ +I+K A +++ L +Q+ +P R Sbjct: 1320 ESPDFQLQAMIQAAGKLVLIDKLLPKLKAGGHRVLIFSQMVRCLDILEDYLIQRRYPYER 1379 Query: 93 TLDK-----DPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQ 145 + I +++ + + G G+NL + + F W+ + Sbjct: 1380 IDGRVRGNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLT-AADTCIIFDSDWNPQNDL 1438 Query: 146 QMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNAL 198 Q R + G ++V +Y LI +N+ + + + K + +L ++ Sbjct: 1439 QAQARC-----HRIGQSKSVKIYRLITRNSYEREMFDKASLKLGLDKAVLQSM 1486 >gi|124487249|ref|NP_001074886.1| chromodomain-helicase-DNA-binding protein 7 [Mus musculus] gi|148877247|sp|A2AJK6|CHD7_MOUSE RecName: Full=Chromodomain-helicase-DNA-binding protein 7; Short=CHD-7; AltName: Full=ATP-dependent helicase CHD7 gi|123228216|emb|CAM16769.1| chromodomain helicase DNA binding protein 7 [Mus musculus] gi|123229796|emb|CAM25204.1| chromodomain helicase DNA binding protein 7 [Mus musculus] Length = 2986 Score = 89.2 bits (220), Expect = 3e-16, Method: Composition-based stats. Identities = 34/233 (14%), Positives = 78/233 (33%), Gaps = 42/233 (18%) Query: 2 KQYHK-FQRE-LYCDLQGENIEAFNSASKTVKCLQLANGAVYYDE----------EKHWK 49 K Y ++ + G N + ++ + N + E H Sbjct: 1206 KYYRAILEKNFTFLSKGGGQANVPNLLNTMMELRKCCNHPYLINGAEEKILEEFKETHNA 1265 Query: 50 EVHDEKIKALEV------IIEK------ANAAPIIVAYHFNSDLAR-----LQKAFPQGR 92 E D +++A+ +I+K A +++ L +Q+ +P R Sbjct: 1266 ESPDFQLQAMIQAAGKLVLIDKLLPKLKAGGHRVLIFSQMVRCLDILEDYLIQRRYPYER 1325 Query: 93 TLDK-----DPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQ 145 + I +++ + + G G+NL + + F W+ + Sbjct: 1326 IDGRVRGNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLT-AADTCIIFDSDWNPQNDL 1384 Query: 146 QMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNAL 198 Q R + G ++V +Y LI +N+ + + + K + +L ++ Sbjct: 1385 QAQARC-----HRIGQSKSVKIYRLITRNSYEREMFDKASLKLGLDKAVLQSM 1432 >gi|302665258|ref|XP_003024241.1| hypothetical protein TRV_01591 [Trichophyton verrucosum HKI 0517] gi|291188288|gb|EFE43630.1| hypothetical protein TRV_01591 [Trichophyton verrucosum HKI 0517] Length = 1143 Score = 89.2 bits (220), Expect = 3e-16, Method: Composition-based stats. Identities = 36/163 (22%), Positives = 67/163 (41%), Gaps = 21/163 (12%) Query: 45 EKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFP---------QGRT 93 K W ++ K+ L +++ AN I+V F + L++ G+T Sbjct: 950 NKEW--MNSGKVDKLCELLDNYIANGDRILVFSQFTMVMDILEQVLETQKIKFFRLDGKT 1007 Query: 94 LDKDPCTI-QEWNEG-KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERI 151 +D +I ++E IP+ + G G+NL N ++ F ++ +E Q Sbjct: 1008 SVEDRQSILDAFHEQVDIPVFMLSTKAGGAGINL-ACANKVIIFDSSFNPQEDIQA---- 1062 Query: 152 GVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 R + G R V V L+ + TI+E + +TK + + Sbjct: 1063 -ENRAHRVGQTREVEVVRLVTRGTIEEQIHALGQTKLALDQRV 1104 >gi|225436589|ref|XP_002275100.1| PREDICTED: hypothetical protein [Vitis vinifera] Length = 1764 Score = 89.2 bits (220), Expect = 3e-16, Method: Composition-based stats. Identities = 27/167 (16%), Positives = 61/167 (36%), Gaps = 20/167 (11%) Query: 51 VHDEKIKALEVIIEKANA--APIIVAYHFNSDLARLQKAF---------PQGRTLDK-DP 98 + K+ L+ ++EK + +++ L L + G T + Sbjct: 931 LSSGKLVLLDKLLEKLHETNHRVLIFSQMVRMLDILAEYMSLRGFQFQRLDGSTKAELRQ 990 Query: 99 CTIQEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 + +N + G G+NL + ++ F W+ + Q + R Sbjct: 991 QAMDHFNAPGSDDFCFLLSTRAGGLGINL-ATADTVIIFDSDWNPQNDLQAMSR-----A 1044 Query: 157 RQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETI 203 + G + V +Y + +++E +L+R + K + L++ L E Sbjct: 1045 HRIGQREVVNIYRFVTSKSVEENILKRAKQKMVLDHLVIQKLNAEGR 1091 >gi|224094755|ref|XP_002310223.1| chromatin remodeling complex subunit [Populus trichocarpa] gi|222853126|gb|EEE90673.1| chromatin remodeling complex subunit [Populus trichocarpa] Length = 754 Score = 89.2 bits (220), Expect = 3e-16, Method: Composition-based stats. Identities = 29/178 (16%), Positives = 68/178 (38%), Gaps = 20/178 (11%) Query: 32 CLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFP 89 L+ A Y+ K + L+ ++ + A +++ + L + F Sbjct: 485 LLESAFDGSYFYPPVEQIVEQCGKFRLLDKLLNRLFALKHKVLIFSQWTKVLDIMDYYFS 544 Query: 90 Q----------GRTLDKDPCTIQEWN--EGKIPLLFAHPASCGHGLNLQYGGNILVFFSL 137 + LD+ I+E+N + + + G G+NL + + + Sbjct: 545 EKGFEVCRIDGSVNLDERKRQIEEFNDENSQYRVFLLSTRAGGLGINLT-SADTCILYDS 603 Query: 138 WWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 W+ + Q ++R + G + V VY L +I+ +L+R +K ++ +++ Sbjct: 604 DWNPQMDLQAMDRC-----HRIGQTKPVHVYRLATAQSIEGRILKRAFSKLKLEHVVI 656 >gi|124487025|ref|NP_001074845.1| chromodomain helicase DNA binding protein 5 isoform1 [Mus musculus] Length = 1952 Score = 89.2 bits (220), Expect = 3e-16, Method: Composition-based stats. Identities = 22/160 (13%), Positives = 54/160 (33%), Gaps = 20/160 (12%) Query: 45 EKHWKEVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQ----------KAFPQGR 92 + K+ L+ +++K +++ L L+ + G Sbjct: 1017 DGSSLVKSSGKLMLLQKMLKKLRDEGHRVLIFSQMTKMLDLLEDFLEYEGYKYERIDGGI 1076 Query: 93 TLDKDPCTIQEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 T I +N + + G G+NL + ++ + W+ Q Sbjct: 1077 TGGLRQEAIDRFNAPGAQQFCFLLSTRAGGLGINL-ATADTVIIYDSDWNPHNDIQA--- 1132 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 +R + G + V +Y + + +++E + Q + K + Sbjct: 1133 --FSRAHRIGQNKKVMIYRFVTRASVEERITQVAKRKMML 1170 >gi|66359910|ref|XP_627133.1| brahma like protein with a HSA domain, SNF2 like helicase and a bromo domain [Cryptosporidium parvum Iowa II] gi|46228555|gb|EAK89425.1| brahma like protein with a HSA domain, SNF2 like helicase and a bromo domain [Cryptosporidium parvum Iowa II] Length = 1673 Score = 89.2 bits (220), Expect = 3e-16, Method: Composition-based stats. Identities = 37/209 (17%), Positives = 78/209 (37%), Gaps = 26/209 (12%) Query: 7 FQRELYCDLQGENIEAFNSASKTVKCLQ----LANGAVYYDEEKHWKEVHDEKIKALEVI 62 Q+ LY +L+ N + K + Y +E + K L+ I Sbjct: 1010 LQQYLYKELESNENSGPNVLMQLRKVCNHPFLFSTEIQYPSDESIVRVC--GKFVMLDSI 1067 Query: 63 IE--KANAAPIIVAYHFNSDLARLQ-----KAFP----QGRTLDKDPC-TIQEWNEGKIP 110 + +A +++ L L+ + P G TL +D +++ +N P Sbjct: 1068 LPKLRAAGHRVLIFSQMTKLLTLLEVFLSLRNMPFLRLDGTTLSEDRQESLKLFNAENSP 1127 Query: 111 --LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVY 168 + + G G+NLQ + ++ F W+ + +Q +R + G K+ V Sbjct: 1128 YFVFLLSTKAGGFGINLQ-SADTVILFDSDWNPQNDEQA-----QSRAHRIGQKKEVLTL 1181 Query: 169 YLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + +T++E ++ K L++ + Sbjct: 1182 RFVTPDTVEERIMTTAGIKLDKDALIIKS 1210 >gi|67515813|ref|XP_657792.1| hypothetical protein AN0188.2 [Aspergillus nidulans FGSC A4] gi|40746905|gb|EAA66061.1| hypothetical protein AN0188.2 [Aspergillus nidulans FGSC A4] Length = 1123 Score = 88.8 bits (219), Expect = 3e-16, Method: Composition-based stats. Identities = 31/168 (18%), Positives = 67/168 (39%), Gaps = 24/168 (14%) Query: 46 KHWKEVHDEKIKALEVIIEK---ANAAPIIVAYHFNS------DLARLQKA---FPQGRT 93 K L+ +I + +I+ F+ DL ++KA F GR Sbjct: 798 GQHIVDASCKFIVLQKMIRQYVGLENKKVIIFSGFDQTLDLCEDLLEMEKAQFSFKYGRL 857 Query: 94 LDKDPCTIQ------EWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQM 147 + N+ + + + G GLNL +I++F W+ Q+ Sbjct: 858 DGSTSSAWRNLSVFLFQNDPRYMVFLLSTRAGGEGLNL-VSSSIVIFLDDDWNP----QV 912 Query: 148 IERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 + R +R + G + V ++ + A+ T+++ + +R+ K+ + D ++ Sbjct: 913 M-RQAESRVHRIGQTQPVQIFRIHAKGTVEDQMRRRMDKKAYLADKVM 959 >gi|289617844|emb|CBI55421.1| unnamed protein product [Sordaria macrospora] Length = 1667 Score = 88.8 bits (219), Expect = 3e-16, Method: Composition-based stats. Identities = 33/175 (18%), Positives = 65/175 (37%), Gaps = 20/175 (11%) Query: 37 NGAVYYDEEKHWKEVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARL---------- 84 NG+ +++ K+ L+ ++ K + +++ L L Sbjct: 771 NGSTRREDQIKGLITSSGKMMLLDQLLAKLKKDGHRVLIFSQMVKMLDILGDYLRVRGYQ 830 Query: 85 QKAFPQGRTLDKDPCTIQEWNE--GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLE 142 + I +N + G G+NL + ++ + W+ + Sbjct: 831 FQRLDGTIPAGPRRMAINHFNAEGSDDFCFLLSTRAGGLGINLMT-ADTVIIYDSDWNPQ 889 Query: 143 EHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 Q + R + G KR V VY L+A+ TI+E V++R R K ++ L + A Sbjct: 890 ADLQAMAR-----AHRIGQKRPVNVYRLVAKQTIEEEVVKRARNKLFLEYLTIQA 939 >gi|281346162|gb|EFB21746.1| hypothetical protein PANDA_013140 [Ailuropoda melanoleuca] Length = 1814 Score = 88.8 bits (219), Expect = 3e-16, Method: Composition-based stats. Identities = 22/160 (13%), Positives = 54/160 (33%), Gaps = 20/160 (12%) Query: 45 EKHWKEVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQ----------KAFPQGR 92 + K+ L+ +++K +++ L L+ + G Sbjct: 882 DGSSLVKSSGKLMLLQKMLKKLRDEGHRVLIFSQMTKMLDLLEDFLEYEGYKYERIDGGI 941 Query: 93 TLDKDPCTIQEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 T I +N + + G G+NL + ++ + W+ Q Sbjct: 942 TGGLRQEAIDRFNAPGAQQFCFLLSTRAGGLGINL-ATADTVIIYDSDWNPHNDIQA--- 997 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 +R + G + V +Y + + +++E + Q + K + Sbjct: 998 --FSRAHRIGQNKKVMIYRFVTRASVEERITQVAKRKMML 1035 >gi|224013864|ref|XP_002296596.1| predicted protein [Thalassiosira pseudonana CCMP1335] gi|220968948|gb|EED87292.1| predicted protein [Thalassiosira pseudonana CCMP1335] Length = 101 Score = 88.8 bits (219), Expect = 3e-16, Method: Composition-based stats. Identities = 23/105 (21%), Positives = 44/105 (41%), Gaps = 7/105 (6%) Query: 87 AFPQGRTLDKDPCTIQEWNEG-KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQ 145 +DK + +N K+ S G G+NL G + +VF+ W+ Sbjct: 1 RLDGATDVDKRQRLMDRFNTDTKVFCFILSTRSGGLGINLT-GADTVVFYDSDWNPAMDA 59 Query: 146 QMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 Q R + G R V +Y ++ +++I+E +L + + K + Sbjct: 60 QA-----QDRAHRIGQTREVHIYRMVTEHSIEENILTKAKQKRNL 99 >gi|194208118|ref|XP_001492263.2| PREDICTED: chromodomain helicase DNA binding protein 5 [Equus caballus] Length = 1936 Score = 88.8 bits (219), Expect = 3e-16, Method: Composition-based stats. Identities = 22/160 (13%), Positives = 54/160 (33%), Gaps = 20/160 (12%) Query: 45 EKHWKEVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQ----------KAFPQGR 92 + K+ L+ +++K +++ L L+ + G Sbjct: 997 DGSSLVKSSGKLMLLQKMLKKLRDEGHRVLIFSQMTKMLDLLEDFLEYEGYKYERIDGGI 1056 Query: 93 TLDKDPCTIQEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 T I +N + + G G+NL + ++ + W+ Q Sbjct: 1057 TGGLRQEAIDRFNAPGAQQFCFLLSTRAGGLGINL-ATADTVIIYDSDWNPHNDIQA--- 1112 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 +R + G + V +Y + + +++E + Q + K + Sbjct: 1113 --FSRAHRIGQNKKVMIYRFVTRASVEERITQVAKRKMML 1150 >gi|326932279|ref|XP_003212247.1| PREDICTED: chromodomain-helicase-DNA-binding protein 5-like, partial [Meleagris gallopavo] Length = 1949 Score = 88.8 bits (219), Expect = 3e-16, Method: Composition-based stats. Identities = 22/160 (13%), Positives = 55/160 (34%), Gaps = 20/160 (12%) Query: 45 EKHWKEVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQ----------KAFPQGR 92 + + K+ L+ +++K +++ L L+ + G Sbjct: 990 DGNSLVKSSGKLMLLQKMLKKLRDGGHRVLIFSQMTKMLDLLEDFLEYEGYKYERIDGGI 1049 Query: 93 TLDKDPCTIQEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 T I +N + + G G+NL + ++ + W+ Q Sbjct: 1050 TGGLRQEAIDRFNAPGAQQFCFLLSTRAGGLGINL-ATADTVIIYDSDWNPHNDIQA--- 1105 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 +R + G + V +Y + + +++E + Q + K + Sbjct: 1106 --FSRAHRIGQNKKVMIYRFVTRASVEERITQVAKRKMML 1143 >gi|326482383|gb|EGE06393.1| hypothetical protein TEQG_05396 [Trichophyton equinum CBS 127.97] Length = 1130 Score = 88.8 bits (219), Expect = 3e-16, Method: Composition-based stats. Identities = 36/163 (22%), Positives = 67/163 (41%), Gaps = 21/163 (12%) Query: 45 EKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFP---------QGRT 93 K W ++ K+ L +++ AN I+V F + L++ G+T Sbjct: 937 NKEW--MNSGKVDKLCELLDNYIANGDRILVFSQFTMVMDILEQVLETQKIKFFRLDGKT 994 Query: 94 LDKDPCTI-QEWNEG-KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERI 151 +D +I ++E IP+ + G G+NL N ++ F ++ +E Q Sbjct: 995 SVEDRQSILDAFHEQVDIPVFMLSTKAGGAGINL-ACANKVIIFDSSFNPQEDIQA---- 1049 Query: 152 GVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 R + G R V V L+ + TI+E + +TK + + Sbjct: 1050 -ENRAHRVGQTREVEVVRLVTRGTIEEQIHALGQTKLALDQRV 1091 >gi|307107791|gb|EFN56033.1| hypothetical protein CHLNCDRAFT_22847 [Chlorella variabilis] Length = 480 Score = 88.8 bits (219), Expect = 3e-16, Method: Composition-based stats. Identities = 17/128 (13%), Positives = 43/128 (33%), Gaps = 17/128 (13%) Query: 67 NAAPIIVAYHFNSDLARLQKAFPQGRT-----------LDKDPCTIQEWNEGKIPLLFAH 115 +++ + L L Q D+ + + + Sbjct: 350 EGHKVLIFSQMTTMLDLLSSYLEQREVGHCRIDGSICWQDRQENMKRFNEDPDCKVFLLS 409 Query: 116 PASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNT 175 + G G+NL + + + W+ + Q ++R + G ++ V V L ++ Sbjct: 410 TRAGGLGINLT-AADTCIIYDSDWNPHQDLQAMDRC-----HRIGQQKPVLVMRLATAHS 463 Query: 176 IDELVLQR 183 ++ +L+R Sbjct: 464 VEGKMLRR 471 >gi|148237261|ref|NP_001090145.1| helicase-like transcription factor [Xenopus laevis] gi|80476497|gb|AAI08610.1| MGC131155 protein [Xenopus laevis] Length = 999 Score = 88.8 bits (219), Expect = 4e-16, Method: Composition-based stats. Identities = 33/201 (16%), Positives = 70/201 (34%), Gaps = 32/201 (15%) Query: 29 TVKCLQLA-------NGAVYYDEEKHWKEVHDEKIKALE-VIIEKANA---APIIVAYHF 77 ++ QL + ++ ++ W + KI AL ++E+ IV F Sbjct: 793 LLRLDQLVECPQEDLDSSINKKPDQKW--MSSTKISALMHSLVEQRRKDATIKSIVVSQF 850 Query: 78 NSDLARLQKAFPQGR----------TLDKDPCTIQEWNEGKIP---LLFAHPASCGHGLN 124 S L+ ++ A + T K IQ + ++ + G GLN Sbjct: 851 TSFLSLIEVALRESGFMFTRLDGSMTQKKRTEAIQSFQRPDAQSPTIMLLSLKAGGVGLN 910 Query: 125 LQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRL 184 L + + W+ +Q +R + G + V + + +++++E +L+ Sbjct: 911 LT-AASRVFLMDPAWNPAAEEQCFDRC-----HRLGQTKEVIITKFVVRDSVEENMLKIQ 964 Query: 185 RTKSTIQDLLLNALKKETIHV 205 K + A K + Sbjct: 965 SKKRQLAAGAFGAKKSSASQI 985 >gi|50548883|ref|XP_501912.1| YALI0C16643p [Yarrowia lipolytica] gi|49647779|emb|CAG82232.1| YALI0C16643p [Yarrowia lipolytica] Length = 1085 Score = 88.8 bits (219), Expect = 4e-16, Method: Composition-based stats. Identities = 36/169 (21%), Positives = 59/169 (34%), Gaps = 19/169 (11%) Query: 45 EKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAF-----------PQGRT 93 K + +KAL + +K ++ L L+ F Sbjct: 629 GDPAKSGKMQVVKALVDLWKK-QGHRTLLFCQTRQMLEILEDFFANMPDIKYLRMDGTTP 687 Query: 94 LDKDPCTIQEWNEG-KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIG 152 + K + +N+ L G G+NL G N ++ F W+ Q ER Sbjct: 688 ISKRQDMVDTYNKDTSYDLFLLTTRVGGLGVNLT-GANRVIIFDPDWNPSTDLQARERSW 746 Query: 153 VTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 + G KR V VY L+ TI+E + R K + + +L K+ Sbjct: 747 -----RLGQKRNVVVYRLMTAGTIEEKIYHRQIFKQFLTNKILKDAKQR 790 >gi|225677983|gb|EEH16267.1| DNA repair and recombination protein RAD26 [Paracoccidioides brasiliensis Pb03] Length = 1030 Score = 88.8 bits (219), Expect = 4e-16, Method: Composition-based stats. Identities = 31/137 (22%), Positives = 48/137 (35%), Gaps = 17/137 (12%) Query: 67 NAAPIIVAYHFNSDLARLQKAFPQGR----------TLDKDPCTIQEWN-EGKIPLLFAH 115 N ++V H L LQ F T D + +N + + + Sbjct: 632 NGDKVLVFSHSVRLLKMLQMLFKHTSYNVSYLDGSMTYDNRAKAVDNFNADPREFVFLIS 691 Query: 116 PASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNT 175 + G GLN+ N +V W+ Q R + G R V V+ LI+ T Sbjct: 692 TRAGGIGLNIT-SANKVVVVDPNWNPAFDLQA-----QDRAYRIGQSRDVEVFRLISAGT 745 Query: 176 IDELVLQRLRTKSTIQD 192 I+E+V R K + Sbjct: 746 IEEIVYARQIYKQQQAN 762 >gi|169606802|ref|XP_001796821.1| hypothetical protein SNOG_06450 [Phaeosphaeria nodorum SN15] gi|160707083|gb|EAT86281.2| hypothetical protein SNOG_06450 [Phaeosphaeria nodorum SN15] Length = 1598 Score = 88.8 bits (219), Expect = 4e-16, Method: Composition-based stats. Identities = 24/148 (16%), Positives = 54/148 (36%), Gaps = 18/148 (12%) Query: 68 AAPIIVAYHFNSDLARLQKAFPQGRTLDKD----------PCTIQEWNEGKIPLL--FAH 115 +++ F L ++ + I ++N PL Sbjct: 955 GHRVLIFSQFLDMLNIVEDFLDGMEMAYQRLDGQMGSLEKQKRIDQFNAPDSPLFAFLLS 1014 Query: 116 PASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNT 175 + G G+NL + ++ W+ + Q I R + G K V + L+ +++ Sbjct: 1015 TRAGGVGINL-ATADTVIILDPDWNPHQDLQAIAR-----AHRIGQKNKVLCFQLMTRSS 1068 Query: 176 IDELVLQRLRTKSTIQDLLLNALKKETI 203 ++E ++Q R K + +++ L + I Sbjct: 1069 VEEKIIQMGRKKMALDHVVVEQLDADDI 1096 >gi|94266483|ref|ZP_01290174.1| Helicase-like [delta proteobacterium MLMS-1] gi|93452898|gb|EAT03409.1| Helicase-like [delta proteobacterium MLMS-1] Length = 137 Score = 88.8 bits (219), Expect = 4e-16, Method: Composition-based stats. Identities = 22/81 (27%), Positives = 37/81 (45%), Gaps = 6/81 (7%) Query: 117 ASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTI 176 A CG GLNL + ++ WW+ Q +R + G +R V +Y L+ + +I Sbjct: 41 APCGTGLNLT-AADYVIHLDPWWNPAVEDQASDR-----AHRIGQERPVTIYRLVTKGSI 94 Query: 177 DELVLQRLRTKSTIQDLLLNA 197 +E +L K + + LL Sbjct: 95 EEKILALHGHKRDLAENLLRG 115 >gi|167837009|ref|ZP_02463892.1| helicase, Snf2 family protein [Burkholderia thailandensis MSMB43] Length = 711 Score = 88.8 bits (219), Expect = 4e-16, Method: Composition-based stats. Identities = 33/186 (17%), Positives = 74/186 (39%), Gaps = 24/186 (12%) Query: 26 ASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAP---IIVAYHFNSDLA 82 + ++ ++++ + Y +++ V K L + E A P +V + Sbjct: 381 LTCALQNMRMSCNSTYLLDQETDHGV---KADELATLFESLFAQPEAKAVVFSQWTRTHE 437 Query: 83 RLQKAFPQ----------GRTLDKDPCTIQEW-NEGKIPLLFAHPASCGHGLNLQYGGNI 131 + + + G + P ++ + ++ + + GLNLQ+ + Sbjct: 438 IVIRRLKKLGIGYVSFHGGVPSARRPALLERFRDDPDCRVFL-STDAGSTGLNLQH-AST 495 Query: 132 LVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQ 191 LV L W+ +Q I RI + G ++ V + +A+ TI+E +L L K ++ Sbjct: 496 LVNMDLPWNPAVLEQRIARI-----HRMGQRKPVRIINYVAKGTIEEGMLSVLAFKRSLS 550 Query: 192 DLLLNA 197 +L+ Sbjct: 551 AGILDG 556 >gi|73981363|ref|XP_533028.2| PREDICTED: similar to chromodomain helicase DNA binding protein 1-like [Canis familiaris] Length = 972 Score = 88.8 bits (219), Expect = 4e-16, Method: Composition-based stats. Identities = 33/208 (15%), Positives = 77/208 (37%), Gaps = 27/208 (12%) Query: 1 MKQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKAL- 59 MK F+ E+ + ++ N S+ KC + ++ E + + Sbjct: 380 MKDLDAFESEM-----AKKVKLQNVLSQLRKC---VDHPYLFEGETVPFFLTLLFMNIFV 431 Query: 60 EVIIEKANAAPIIVAYHFNSDLARLQKAFP---------QGRTLDKDPC-TIQEWNEGKI 109 II A +++ L LQ G ++ I+ + + + Sbjct: 432 ANII--AQGHRVLLFSQMTQMLDILQDYMDYRGYSYERVDGSVRGEERHLAIKNFGQQPV 489 Query: 110 PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYY 169 + + G G+NL + ++F ++ + Q R + G ++V V Sbjct: 490 FVFLLSTRAGGVGMNLT-AADTVIFVDSDFNPQNDLQAAAR-----AHRIGQNKSVKVIR 543 Query: 170 LIAQNTIDELVLQRLRTKSTIQDLLLNA 197 LI ++T++E+V ++ +K + + ++ Sbjct: 544 LIGRDTVEEIVYRKAASKLQLTNAIIEG 571 >gi|45198479|ref|NP_985508.1| AFL040Wp [Ashbya gossypii ATCC 10895] gi|44984430|gb|AAS53332.1| AFL040Wp [Ashbya gossypii ATCC 10895] Length = 1086 Score = 88.8 bits (219), Expect = 4e-16, Method: Composition-based stats. Identities = 39/223 (17%), Positives = 83/223 (37%), Gaps = 39/223 (17%) Query: 7 FQRELYCDLQGENIEAFNSAS--------KTVKCLQLAN-------------GAVYYDEE 45 QR+ Y + ++++A N ++ +QL G Y +E Sbjct: 384 MQRKWYKQILEKDLDAVNGSNGSKESKTRLLNIMMQLRKCCNHPYLFDGAEPGPPYTTDE 443 Query: 46 KHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQ---------KAFPQGRTLDK 96 K+ + K + + +++ + L L+ G T + Sbjct: 444 HLVYNSAKLKVLDKLLKKLKEDGSRVLIFSQMSRLLDILEDYCYFRGYEYCRIDGSTAHE 503 Query: 97 DP-CTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGV 153 D I E+N + + G G+NL +++V + W+ + Q ++R Sbjct: 504 DRIEAIDEYNAPDSRKFIFLLTTRAGGLGINLTT-ADVVVLYDSDWNPQADLQAMDR--- 559 Query: 154 TRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + G K+ V V+ L+ N+++E +L+R K + L++ Sbjct: 560 --AHRIGQKKQVKVFRLVTDNSVEEKILERATQKLRLDQLVIQ 600 >gi|301620878|ref|XP_002939792.1| PREDICTED: DNA excision repair protein ERCC-6-like [Xenopus (Silurana) tropicalis] Length = 732 Score = 88.8 bits (219), Expect = 4e-16, Method: Composition-based stats. Identities = 31/162 (19%), Positives = 59/162 (36%), Gaps = 19/162 (11%) Query: 53 DEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQK----------AFPQGRTLDKDPCT 100 K+ +E +++ +++ L L+ T+ Sbjct: 387 SGKLIVVEALLKIWHRQGHRVLLFTQSRQMLQILEVFVRSRCYSYLKMDGTTTIASRQPL 446 Query: 101 IQEWNE-GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQA 159 I ++NE + + G G+NL G N ++ + W+ Q ER + Sbjct: 447 IAKYNEDPSLFVFLLTTRVGGLGVNLT-GANRVIIYDPDWNPSTDTQARERAW-----RI 500 Query: 160 GFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 G K+ V VY L+ TI+E + R K + + +L K+ Sbjct: 501 GQKKQVTVYRLLTAGTIEEKIYHRQIFKQFLTNRVLKDPKQR 542 >gi|156052901|ref|XP_001592377.1| hypothetical protein SS1G_06618 [Sclerotinia sclerotiorum 1980] gi|154704396|gb|EDO04135.1| hypothetical protein SS1G_06618 [Sclerotinia sclerotiorum 1980 UF-70] Length = 1505 Score = 88.8 bits (219), Expect = 4e-16, Method: Composition-based stats. Identities = 34/178 (19%), Positives = 65/178 (36%), Gaps = 25/178 (14%) Query: 43 DEEKHWKEVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARL----------QKAFPQ 90 D++ K+ L+ ++ K + +++ L L + Sbjct: 735 DDQLKGLIASSGKMMLLDRLLAKLKKDNHRVLIFSQMVKMLDILGDYLQLRGYQFQRLDG 794 Query: 91 GRTLDKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMI 148 I +N + G G+NL + +V F W+ + Q + Sbjct: 795 TVAAGPRRQAIDHFNAEDSNDFCFLLSTRAGGLGINLMT-ADTVVIFDSDWNPQADLQAM 853 Query: 149 ERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKS-----TIQDLLLNALKKE 201 R + G K+ V +Y L+++ T++E +L+R R K TIQ + + KKE Sbjct: 854 AR-----AHRIGQKKPVSIYRLVSKETVEEEILERARNKLMLEFITIQRGVTDKEKKE 906 >gi|242077806|ref|XP_002448839.1| hypothetical protein SORBIDRAFT_06g034160 [Sorghum bicolor] gi|241940022|gb|EES13167.1| hypothetical protein SORBIDRAFT_06g034160 [Sorghum bicolor] Length = 1042 Score = 88.8 bits (219), Expect = 4e-16, Method: Composition-based stats. Identities = 24/156 (15%), Positives = 54/156 (34%), Gaps = 19/156 (12%) Query: 42 YDEEKHWKEVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQKAF----------P 89 D+ + K+ + ++ +++ L +Q+A Sbjct: 680 DDDALQVGQDVSCKLSFIMSLLRNLVGEGHHVLIFSQTRKMLNLIQEAIILEGYEFLRID 739 Query: 90 QGRTLDKDPCTIQEWNEGK-IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMI 148 + + ++++ EG+ P+ G GL L ++V W+ Q + Sbjct: 740 GTTKVSERERIVKDFQEGRGAPIFLLTTQVGGLGLTLTKAARVIV-VDPAWNPSTDNQSV 798 Query: 149 ERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRL 184 +R + G + V VY L+ TI+E + + Sbjct: 799 DR-----AYRIGQTKNVIVYRLMTSATIEEKIYKLQ 829 >gi|322710049|gb|EFZ01624.1| chromatin remodeling complex subunit (Chd3), putative [Metarhizium anisopliae ARSEF 23] Length = 1671 Score = 88.8 bits (219), Expect = 4e-16, Method: Composition-based stats. Identities = 30/166 (18%), Positives = 65/166 (39%), Gaps = 20/166 (12%) Query: 52 HDEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQKAFP----QGRTLDKDPCT----- 100 K+ LE ++ K +++ F L ++ Q R LD + Sbjct: 1100 ASAKLLLLEQMLPKLKERGHRVLIFSQFLQQLDIVEDFLAGIGYQYRRLDGQLSSLEKQR 1159 Query: 101 -IQEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 I +NE I + G G+NL + ++ ++ + Q + R Sbjct: 1160 RIDAFNEPGSAIFAFLLSTRAGGVGINL-ATADTVIIMDPDFNPHQDIQALSR-----AH 1213 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETI 203 + G K+ V + L+ ++T++E ++Q + K + L+ ++ + I Sbjct: 1214 RIGQKQKVLCFQLMTKDTVEERIMQIGKKKMALDHALIESMDDDEI 1259 >gi|50303907|ref|XP_451901.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140] gi|49641033|emb|CAH02294.1| KLLA0B08327p [Kluyveromyces lactis] Length = 1534 Score = 88.8 bits (219), Expect = 4e-16, Method: Composition-based stats. Identities = 34/159 (21%), Positives = 59/159 (37%), Gaps = 20/159 (12%) Query: 55 KIKALEVIIEK--ANAAPIIVAYH------FNSDLAR---LQKAFPQGRTLDKDPCTI-Q 102 K + LE I+ K A +++ + D R ++ G T D + Sbjct: 1006 KFELLERILPKFKATGHRVLIFFQMTQVMDIMEDFLRYLDMKYLRLDGHTKSDDRTALLN 1065 Query: 103 EWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 +N + G GLNLQ + ++ F W+ + Q R + G Sbjct: 1066 TFNAPNSDYFCFLLSTRAGGLGLNLQT-ADTVIIFDTDWNPHQDLQA-----QDRAHRIG 1119 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 K V + LI N+++E +L + K I ++ A K Sbjct: 1120 QKNEVRILRLITDNSVEEAILDKAHAKLDIDGKVIQAGK 1158 >gi|164427331|ref|XP_963868.2| hypothetical protein NCU03060 [Neurospora crassa OR74A] gi|157071698|gb|EAA34632.2| hypothetical protein NCU03060 [Neurospora crassa OR74A] Length = 1664 Score = 88.8 bits (219), Expect = 4e-16, Method: Composition-based stats. Identities = 33/175 (18%), Positives = 65/175 (37%), Gaps = 20/175 (11%) Query: 37 NGAVYYDEEKHWKEVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARL---------- 84 NG+ +++ K+ L+ ++ K + +++ L L Sbjct: 768 NGSTRREDQIKGLITSSGKMMLLDQLLAKLRKDGHRVLIFSQMVKMLDILGDYLRVRGYQ 827 Query: 85 QKAFPQGRTLDKDPCTIQEWNE--GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLE 142 + I +N + G G+NL + ++ + W+ + Sbjct: 828 FQRLDGTIPAGPRRMAINHFNAEGSDDFCFLLSTRAGGLGINLMT-ADTVIIYDSDWNPQ 886 Query: 143 EHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 Q + R + G KR V VY L+A+ TI+E V++R R K ++ L + A Sbjct: 887 ADLQAMAR-----AHRIGQKRPVNVYRLVAKQTIEEEVVKRARNKLFLEYLTIQA 936 >gi|302823493|ref|XP_002993399.1| hypothetical protein SELMODRAFT_40953 [Selaginella moellendorffii] gi|300138830|gb|EFJ05584.1| hypothetical protein SELMODRAFT_40953 [Selaginella moellendorffii] Length = 738 Score = 88.8 bits (219), Expect = 4e-16, Method: Composition-based stats. Identities = 36/176 (20%), Positives = 67/176 (38%), Gaps = 22/176 (12%) Query: 38 GAVYYDEE--KHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQK------- 86 G + DE + K+ AL+ ++ K + +++ + L L+K Sbjct: 403 GGIQPDESFLGLSDSQNCGKMLALKNLLSKWTSQGDKVLLFSYSVRMLGILEKFLIRRGY 462 Query: 87 ---AFPQGRTLDKDPCTIQEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDL 141 ++ + E+N K + + G GLNL N +V F W+ Sbjct: 463 CFCRLDGSTPMNARQGIVDEFNTSPSKQVVFLISTRAGGLGLNL-VSANRVVVFDPNWNP 521 Query: 142 EEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + Q R + G KR V V+ L+A +++EL+ R K + +L + Sbjct: 522 AQDLQA-----QDRSFRFGQKRHVTVFRLLAAGSLEELIYTRQIYKQQLFNLAVTG 572 >gi|113678140|ref|NP_001038323.1| chromodomain helicase DNA binding protein 4 [Danio rerio] gi|94732824|emb|CAK04973.1| novel protein similar to vertebrate chromodomain helicase DNA binding protein 4 (CHD4) [Danio rerio] Length = 1929 Score = 88.8 bits (219), Expect = 4e-16, Method: Composition-based stats. Identities = 24/153 (15%), Positives = 53/153 (34%), Gaps = 20/153 (13%) Query: 52 HDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQ----------KAFPQGRTLDKDPC 99 K+ L+ ++ K +++ L L+ + G T Sbjct: 1033 SSGKLLLLQKMLRKLKEGGHRVLIFSQMTKMLDLLEDFLENEGYKYERIDGGITGGMRQE 1092 Query: 100 TIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 I +N P + + G G+NL + +V + W+ Q +R Sbjct: 1093 AIDRFNAPGAPQFVFLLSTRAGGLGINL-ATADTVVIYDSDWNPHNDIQA-----FSRAH 1146 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 + G + V +Y + + +++E + Q + K + Sbjct: 1147 RIGQNKKVMIYRFVTKASVEERITQVAKKKMML 1179 >gi|323449444|gb|EGB05332.1| hypothetical protein AURANDRAFT_31163 [Aureococcus anophagefferens] Length = 281 Score = 88.8 bits (219), Expect = 4e-16, Method: Composition-based stats. Identities = 28/116 (24%), Positives = 46/116 (39%), Gaps = 12/116 (10%) Query: 82 ARLQKAFPQGRTLDKDPCTIQEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWW 139 ARL + P G + +N + + G GLNL G + L+ W Sbjct: 176 ARLDGSTPAGE----RQGLVNAFNRPRSDAFVFLLSTRAGGCGLNL-VGASRLLLLDPDW 230 Query: 140 DLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 + +Q + R+ + G R V VY L+ T+DE + R K + D ++ Sbjct: 231 NPAADEQAMARVW-----RDGQTRPVHVYRLLGAGTVDEKIFMRQLGKHDVNDGVV 281 >gi|255726892|ref|XP_002548372.1| conserved hypothetical protein [Candida tropicalis MYA-3404] gi|240134296|gb|EER33851.1| conserved hypothetical protein [Candida tropicalis MYA-3404] Length = 1066 Score = 88.8 bits (219), Expect = 4e-16, Method: Composition-based stats. Identities = 35/159 (22%), Positives = 66/159 (41%), Gaps = 19/159 (11%) Query: 49 KEVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQK----------AFPQGRTLDK 96 K + KI L+ I++K I++ F L L+K G +D+ Sbjct: 886 KYLDSGKIIELKKILDKTTKKGEKILIFSLFTQVLDILEKVLSLFDLKFVRLDGGTKVDE 945 Query: 97 DPCTIQEWNEGK-IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTR 155 TI +NE IP+ + G G+NL N+++ F ++ + +Q +R Sbjct: 946 RQDTIDIFNEDSTIPIFLLSTKAGGFGINLVAANNVII-FDQSFNPHDDKQAEDR----- 999 Query: 156 QRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 + G K+ V V+ +I T+++ +L K + + Sbjct: 1000 AHRVGQKKEVTVFKMITNKTVEKNMLLLAENKLALDKKI 1038 >gi|301097967|ref|XP_002898077.1| chromodomain protein, putative [Phytophthora infestans T30-4] gi|262105438|gb|EEY63490.1| chromodomain protein, putative [Phytophthora infestans T30-4] Length = 1004 Score = 88.8 bits (219), Expect = 4e-16, Method: Composition-based stats. Identities = 24/166 (14%), Positives = 59/166 (35%), Gaps = 20/166 (12%) Query: 50 EVHDEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQKAFPQGR----------TLDKD 97 K+ L+ ++ + +++ F L +Q R T ++ Sbjct: 647 VDTSGKLVLLDKLLPRLKETGHRVLIFSQFKIMLDIIQDYLALRRYNCERIDGNITGNER 706 Query: 98 PCTIQEW--NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTR 155 I + + ++ + G G+NL + ++ + W+ + Q R Sbjct: 707 QSAIDRFCREDSNSFIMLLSTRAGGVGINLT-AADTVIIYDSDWNPQNDLQAQARC---- 761 Query: 156 QRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 + G K++V +Y L+ T + + + K + +L +K + Sbjct: 762 -HRIGQKKSVKIYRLLTAKTYELHMFHKASLKLGLDQAVLGGIKSD 806 >gi|196234384|ref|ZP_03133212.1| Non-specific serine/threonine protein kinase [Chthoniobacter flavus Ellin428] gi|196221576|gb|EDY16118.1| Non-specific serine/threonine protein kinase [Chthoniobacter flavus Ellin428] Length = 897 Score = 88.8 bits (219), Expect = 4e-16, Method: Composition-based stats. Identities = 33/165 (20%), Positives = 62/165 (37%), Gaps = 21/165 (12%) Query: 46 KHWKEVHDEKIKALEVIIEKANAAP---IIVAYHFNSDLARLQKAFPQGRTL-------- 94 + + K++ L ++ A P IIV + + L ++ R Sbjct: 610 DKTEPGYSSKLERLGELLAALCAEPERKIIVFSEWTTMLDLIETQLKNLRAKFVRLDGSV 669 Query: 95 --DKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERI 151 + + E+ + + + GLNLQ + ++ L W+ +Q I R Sbjct: 670 PQARRKQLVAEFQDNPQCRVFLT-TNAGSTGLNLQ-AADTVINVDLPWNPALLEQRIAR- 726 Query: 152 GVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + G KR V VY + + TI+E +L L K + +L+ Sbjct: 727 ----AHRMGQKRKVHVYLFVTEKTIEENLLATLGAKHELAGAVLD 767 >gi|254582196|ref|XP_002497083.1| ZYRO0D15026p [Zygosaccharomyces rouxii] gi|238939975|emb|CAR28150.1| ZYRO0D15026p [Zygosaccharomyces rouxii] Length = 1216 Score = 88.8 bits (219), Expect = 4e-16, Method: Composition-based stats. Identities = 31/183 (16%), Positives = 71/183 (38%), Gaps = 20/183 (10%) Query: 33 LQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQ-- 90 LQ G V + K + K+ + ++EK++ I+V F + ++ + Sbjct: 1025 LQGTRGPVMENLVPSTKMLQCMKL--VRNVVEKSDFEKILVFSQFTTFFDLFEQFLSKDL 1082 Query: 91 --------GRTLDKDPCTI--QEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWD 140 G + I + + E +L + GL L ++++ +W+ Sbjct: 1083 QVSYLKYTGSMNSQQRSDIISRFYRESDKRVLLISMKAGNSGLTLTCANHVII-VDPFWN 1141 Query: 141 LEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKK 200 +Q +R + R VFV+ L +N++++ + + + K + D ++ K Sbjct: 1142 PFVEEQAQDRC-----YRISQTREVFVHRLFIKNSVEDRIAELQKRKRDMVDAAMDPSKM 1196 Query: 201 ETI 203 + I Sbjct: 1197 DGI 1199 >gi|159478845|ref|XP_001697511.1| chromodomain-helicase-DNA-binding protein [Chlamydomonas reinhardtii] gi|158274390|gb|EDP00173.1| chromodomain-helicase-DNA-binding protein [Chlamydomonas reinhardtii] Length = 2000 Score = 88.8 bits (219), Expect = 4e-16, Method: Composition-based stats. Identities = 21/146 (14%), Positives = 48/146 (32%), Gaps = 21/146 (14%) Query: 65 KANAAPIIVAYHFNSDLARLQKA---------FPQGRTLDKD-PCTIQEWNEGKIP---- 110 +A +++ F L L+ G ++ I ++ Sbjct: 982 RAEGKRVLIFSQFVMMLNVLEDYCTLMGYPVERIDGSIKGRERQQAIDRFSAADADQDKA 1041 Query: 111 -LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYY 169 + + G G+ L + + + W+ + Q + R + G + V VY Sbjct: 1042 FVFLLSTRAGGQGITLT-AADTCIIYDSDWNPQNDLQAMARC-----HRIGQTKEVTVYR 1095 Query: 170 LIAQNTIDELVLQRLRTKSTIQDLLL 195 LI+ +T + + K + + +L Sbjct: 1096 LISADTYEMALFSSASRKYGLDEAVL 1121 >gi|221128249|ref|XP_002153956.1| PREDICTED: similar to predicted protein, partial [Hydra magnipapillata] Length = 541 Score = 88.8 bits (219), Expect = 4e-16, Method: Composition-based stats. Identities = 28/156 (17%), Positives = 61/156 (39%), Gaps = 19/156 (12%) Query: 51 VHDEKIKALEVIIEKANAA--PIIVAYHFNSDLARLQKAFPQGRTL----------DKDP 98 + KIK L+ ++ + +++ F L L++ + ++ Sbjct: 386 LDSGKIKQLDKLLPELKEKNDRVLLFSQFVIVLDILEEYLKIRKIKYLRLDGSTKGNERQ 445 Query: 99 CTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 I ++N +I + + G G+NL N +V + ++ +Q +R Sbjct: 446 ELIDKFNHNEEIFIFLLSTRAGGLGINLTT-ANTVVLHDIDFNPYNDKQAEDRC-----H 499 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDL 193 + G R V VY I ++T++E +L K ++ Sbjct: 500 RLGQTRQVTVYKFIGKDTVEENILTCGERKLQLEKS 535 >gi|170085493|ref|XP_001873970.1| SNF2 family DNA-dependent ATPase [Laccaria bicolor S238N-H82] gi|164651522|gb|EDR15762.1| SNF2 family DNA-dependent ATPase [Laccaria bicolor S238N-H82] Length = 1313 Score = 88.8 bits (219), Expect = 4e-16, Method: Composition-based stats. Identities = 24/137 (17%), Positives = 50/137 (36%), Gaps = 17/137 (12%) Query: 70 PIIVAYHFNSDLARLQKAFPQGRTL-----------DKDPCTIQEWNEGKIPLLFAHPAS 118 +V + + L +++ A D+ + +L + Sbjct: 1148 KTVVFSQWTTMLDKIEDALEVAGIRYDRLDGTMKRDDRTKAMDALKTDPGCEVLLVSLKA 1207 Query: 119 CGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDE 178 G GLNL + +W+ Q ++RI + G R V LI +N+I+ Sbjct: 1208 GGVGLNLT-AAQRVYLMDPYWNPAVENQAVDRI-----HRLGQTRPVTTVKLIIENSIEA 1261 Query: 179 LVLQRLRTKSTIQDLLL 195 +L+ + K+ + ++ L Sbjct: 1262 RLLEVQKKKTALANMTL 1278 >gi|189458814|ref|NP_083492.2| chromodomain helicase DNA binding protein 5 isoform 2 [Mus musculus] Length = 1915 Score = 88.8 bits (219), Expect = 4e-16, Method: Composition-based stats. Identities = 22/160 (13%), Positives = 54/160 (33%), Gaps = 20/160 (12%) Query: 45 EKHWKEVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQ----------KAFPQGR 92 + K+ L+ +++K +++ L L+ + G Sbjct: 1017 DGSSLVKSSGKLMLLQKMLKKLRDEGHRVLIFSQMTKMLDLLEDFLEYEGYKYERIDGGI 1076 Query: 93 TLDKDPCTIQEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 T I +N + + G G+NL + ++ + W+ Q Sbjct: 1077 TGGLRQEAIDRFNAPGAQQFCFLLSTRAGGLGINL-ATADTVIIYDSDWNPHNDIQA--- 1132 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 +R + G + V +Y + + +++E + Q + K + Sbjct: 1133 --FSRAHRIGQNKKVMIYRFVTRASVEERITQVAKRKMML 1170 >gi|123248483|emb|CAM23902.1| chromodomain helicase DNA binding protein 5 [Mus musculus] Length = 1946 Score = 88.8 bits (219), Expect = 4e-16, Method: Composition-based stats. Identities = 22/160 (13%), Positives = 54/160 (33%), Gaps = 20/160 (12%) Query: 45 EKHWKEVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQ----------KAFPQGR 92 + K+ L+ +++K +++ L L+ + G Sbjct: 1017 DGSSLVKSSGKLMLLQKMLKKLRDEGHRVLIFSQMTKMLDLLEDFLEYEGYKYERIDGGI 1076 Query: 93 TLDKDPCTIQEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 T I +N + + G G+NL + ++ + W+ Q Sbjct: 1077 TGGLRQEAIDRFNAPGAQQFCFLLSTRAGGLGINL-ATADTVIIYDSDWNPHNDIQA--- 1132 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 +R + G + V +Y + + +++E + Q + K + Sbjct: 1133 --FSRAHRIGQNKKVMIYRFVTRASVEERITQVAKRKMML 1170 >gi|5917755|gb|AAD56023.1|AF181826_1 chromodomain helicase DNA binding protein 1 [Gallus gallus] Length = 981 Score = 88.8 bits (219), Expect = 4e-16, Method: Composition-based stats. Identities = 27/153 (17%), Positives = 56/153 (36%), Gaps = 21/153 (13%) Query: 68 AAPIIVAYHFNSDLARLQKAFP---------QGRTLDK-DPCTIQEWN-EGKIPL-LFAH 115 +++ L L + G + + +N EG Sbjct: 489 GNRVLIFSQMVRMLDILAEYLKYRQFPFQRLDGSIKGELRKQALDHFNAEGSEDFCFLLS 548 Query: 116 PASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNT 175 + G G+NL + +V F W+ + Q R + G K+ V +Y L+ + + Sbjct: 549 TRAGGLGINL-ASADTVVIFDSDWNPQNDLQAQAR-----AHRIGPKKQVNIYRLVTKGS 602 Query: 176 IDELVLQRLRTKSTIQDLL---LNALKKETIHV 205 ++E +L+R + K + L+ ++ K +H Sbjct: 603 VEEDILERAKKKMVLDHLVIQRMDTTGKTVLHT 635 >gi|45190977|ref|NP_985231.1| AER375Cp [Ashbya gossypii ATCC 10895] gi|44984045|gb|AAS53055.1| AER375Cp [Ashbya gossypii ATCC 10895] Length = 1288 Score = 88.8 bits (219), Expect = 4e-16, Method: Composition-based stats. Identities = 39/227 (17%), Positives = 77/227 (33%), Gaps = 35/227 (15%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASK--TVKCLQL---ANGAVYYDEEKHWKEVH---- 52 + Y + + + A K K +QL N +DE + Sbjct: 711 QLYQQMLKHNALFVGAGTEGATKGGIKGLNNKIMQLRKICNHPFVFDEVEGVVNPTRTNS 770 Query: 53 ------DEKIKALEVIIEK--ANAAPIIVAYHFNSDLAR---------LQKAFPQGRTLD 95 K + L+ ++ K A +++ + + L+ G T Sbjct: 771 SLLYRVSGKFELLDRVLPKFKATGHRVLMFFQMTQVMDIMEDFLQMKNLKYMRLDGATKA 830 Query: 96 KDPC-TIQEWNEGKIPLL--FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIG 152 ++ + +N + G GLNLQ + ++ F W+ + Q Sbjct: 831 EERTGMLNAFNAPDSDYFCFLLSTRAGGLGLNLQT-ADTVIIFDTDWNPHQDLQA----- 884 Query: 153 VTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 R + G K V + LI ++++E++L+R K I ++ A K Sbjct: 885 QDRAHRIGQKNEVRILRLITTDSVEEVILERAMQKLDIDGKVIQAGK 931 >gi|328354133|emb|CCA40530.1| hypothetical protein PP7435_Chr4-0362 [Pichia pastoris CBS 7435] Length = 689 Score = 88.8 bits (219), Expect = 4e-16, Method: Composition-based stats. Identities = 34/139 (24%), Positives = 61/139 (43%), Gaps = 17/139 (12%) Query: 53 DEKIKALEVIIEKANAAPIIVAYHFNSDLARLQ--------KAFPQGRTLDK--DPCTIQ 102 K + L I+++ A I+ F LA L+ K T+ + T++ Sbjct: 550 SAKSERLLEILKRDPARKTIIFSQFTKLLATLKPFLTKNGFKCVLYEGTMTRAMRDTTLK 609 Query: 103 EWNE-GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGF 161 E+NE + +L GLNL N +V + WW+ + Q I+R+ + G Sbjct: 610 EFNENPETTVLLCSLKCGAIGLNLTI-ANRVVIYDPWWNPQVEDQAIDRV-----YRFGQ 663 Query: 162 KRAVFVYYLIAQNTIDELV 180 + V VY LI +++++E + Sbjct: 664 TKEVDVYRLIIKDSVEENI 682 >gi|308491646|ref|XP_003108014.1| hypothetical protein CRE_12565 [Caenorhabditis remanei] gi|308249961|gb|EFO93913.1| hypothetical protein CRE_12565 [Caenorhabditis remanei] Length = 1375 Score = 88.8 bits (219), Expect = 4e-16, Method: Composition-based stats. Identities = 35/159 (22%), Positives = 64/159 (40%), Gaps = 20/159 (12%) Query: 55 KIKALEVIIEK--ANAAPIIVAYHFNSDLARLQ---------KAFPQGRTL-DKDPCTIQ 102 K++ L+ I+ K A +++ + S + + G T D+ + Sbjct: 850 KLELLDRILPKLKATGHRVLMFFQMTSMMTIFEDYLNFRNHTYLRLDGSTKPDERGDLLT 909 Query: 103 EWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 +N K L + G GLNLQ + ++ F W+ + Q R + G Sbjct: 910 LYNAPDSKYFLFMLSTRAGGLGLNLQT-ADTVIIFDSDWNPHQDMQA-----QDRAHRIG 963 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 K+ V V LI N+++E +L R K + + ++ A K Sbjct: 964 QKKEVRVLRLITANSVEEKILAAARYKLNVDEKVIQAGK 1002 >gi|148682990|gb|EDL14937.1| mCG131426 [Mus musculus] Length = 1955 Score = 88.8 bits (219), Expect = 4e-16, Method: Composition-based stats. Identities = 22/160 (13%), Positives = 54/160 (33%), Gaps = 20/160 (12%) Query: 45 EKHWKEVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQ----------KAFPQGR 92 + K+ L+ +++K +++ L L+ + G Sbjct: 1026 DGSSLVKSSGKLMLLQKMLKKLRDEGHRVLIFSQMTKMLDLLEDFLEYEGYKYERIDGGI 1085 Query: 93 TLDKDPCTIQEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 T I +N + + G G+NL + ++ + W+ Q Sbjct: 1086 TGGLRQEAIDRFNAPGAQQFCFLLSTRAGGLGINL-ATADTVIIYDSDWNPHNDIQA--- 1141 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 +R + G + V +Y + + +++E + Q + K + Sbjct: 1142 --FSRAHRIGQNKKVMIYRFVTRASVEERITQVAKRKMML 1179 >gi|259489604|tpe|CBF90013.1| TPA: ATPase (Eurofung) [Aspergillus nidulans FGSC A4] Length = 648 Score = 88.8 bits (219), Expect = 4e-16, Method: Composition-based stats. Identities = 31/168 (18%), Positives = 67/168 (39%), Gaps = 24/168 (14%) Query: 46 KHWKEVHDEKIKALEVIIEK---ANAAPIIVAYHFNS------DLARLQKA---FPQGRT 93 K L+ +I + +I+ F+ DL ++KA F GR Sbjct: 323 GQHIVDASCKFIVLQKMIRQYVGLENKKVIIFSGFDQTLDLCEDLLEMEKAQFSFKYGRL 382 Query: 94 LDKDPCTIQ------EWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQM 147 + N+ + + + G GLNL +I++F W+ Q+ Sbjct: 383 DGSTSSAWRNLSVFLFQNDPRYMVFLLSTRAGGEGLNL-VSSSIVIFLDDDWNP----QV 437 Query: 148 IERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 + R +R + G + V ++ + A+ T+++ + +R+ K+ + D ++ Sbjct: 438 M-RQAESRVHRIGQTQPVQIFRIHAKGTVEDQMRRRMDKKAYLADKVM 484 >gi|194744638|ref|XP_001954800.1| GF18453 [Drosophila ananassae] gi|190627837|gb|EDV43361.1| GF18453 [Drosophila ananassae] Length = 1056 Score = 88.8 bits (219), Expect = 4e-16, Method: Composition-based stats. Identities = 30/162 (18%), Positives = 59/162 (36%), Gaps = 22/162 (13%) Query: 52 HDEKIKALEVIIE----KANAAPIIVAYHFNSDLARLQKAFPQGRT----------LDKD 97 K+ + I++ K+ IV + S L L+ + Sbjct: 883 PSSKMLKVMEILKTSILKSKDDKAIVVSQWTSVLDILRDHLEHAGLPTLSLNGTIPVKNR 942 Query: 98 PCTIQEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTR 155 + ++N +L + G GLNL G N L+ L W+ + Q +RI Sbjct: 943 QDIVNQFNNRQSDKRILLLSLTAGGVGLNL-IGANHLLLLDLHWNPQLEAQAQDRI---- 997 Query: 156 QRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + G K+ V +Y + +T+++ + K + + +L Sbjct: 998 -YRVGQKKDVIIYKFMCADTVEQRIKALQDKKLELANGVLTG 1038 >gi|94265886|ref|ZP_01289615.1| Helicase-like [delta proteobacterium MLMS-1] gi|93453581|gb|EAT03980.1| Helicase-like [delta proteobacterium MLMS-1] Length = 137 Score = 88.8 bits (219), Expect = 4e-16, Method: Composition-based stats. Identities = 22/81 (27%), Positives = 37/81 (45%), Gaps = 6/81 (7%) Query: 117 ASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTI 176 A CG GLNL + ++ WW+ Q +R + G +R V +Y L+ + +I Sbjct: 41 APCGTGLNLT-AADYVIHLDPWWNPAVEDQASDR-----AHRIGQERPVTIYRLVTKGSI 94 Query: 177 DELVLQRLRTKSTIQDLLLNA 197 +E +L K + + LL Sbjct: 95 EEKILALHGHKRDLAENLLRG 115 >gi|326520307|dbj|BAK07412.1| predicted protein [Hordeum vulgare subsp. vulgare] Length = 1148 Score = 88.8 bits (219), Expect = 4e-16, Method: Composition-based stats. Identities = 30/165 (18%), Positives = 59/165 (35%), Gaps = 21/165 (12%) Query: 37 NGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAF-------- 88 A+ DEE K + + L ++E+ ++V L +Q+A Sbjct: 782 GEALQVDEEVSCKIIF--IMSLLRKLLEE--GHHVLVFSQTRKMLNLIQEAILLEGYKFL 837 Query: 89 --PQGRTLDKDPCTIQEWNEG-KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQ 145 + + ++++ EG + G GL L ++V W+ Sbjct: 838 RIDGTTKIAERERIVKDFQEGPGAQIFLLTTQVGGLGLTLTKAARVIV-VDPAWNPSTDS 896 Query: 146 QMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 Q ++R + G + V VY L+ TI+E + + K + Sbjct: 897 QSVDR-----AYRIGQTKDVIVYRLMTSGTIEEKIYKMQVLKGAL 936 >gi|302406098|ref|XP_003000885.1| 5-aminolevulinate synthase [Verticillium albo-atrum VaMs.102] gi|261360143|gb|EEY22571.1| 5-aminolevulinate synthase [Verticillium albo-atrum VaMs.102] Length = 1673 Score = 88.8 bits (219), Expect = 4e-16, Method: Composition-based stats. Identities = 30/154 (19%), Positives = 61/154 (39%), Gaps = 18/154 (11%) Query: 55 KIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQ---------GRTLDK-DPCTIQ 102 K+K L I+++ + +++ + L F Q G TL ++ Sbjct: 1176 KVKVLIAILDECRKHKEKVLIFSQSIPTIDWLSTLFQQQQRPYSRLTGDTLPSIRQSMVK 1235 Query: 103 EWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFK 162 +NEG + + G GLN+ G + +V F ++ QQ I R + G Sbjct: 1236 NFNEGDNEIFVISTQAGGQGLNIT-GASRVVIFDFRFNPIAEQQAIGR-----AYRIGQS 1289 Query: 163 RAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + V VY ++ T ++ + + K + +++ Sbjct: 1290 KPVVVYRFVSGGTYEQHLYNKAVWKMQLASRVVD 1323 >gi|325092395|gb|EGC45705.1| SNF2 family helicase/ATPase [Ajellomyces capsulatus H88] Length = 1181 Score = 88.8 bits (219), Expect = 4e-16, Method: Composition-based stats. Identities = 36/162 (22%), Positives = 66/162 (40%), Gaps = 19/162 (11%) Query: 46 KHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFN-------SDLARLQKAF--PQGRTL 94 K+ + +H K+ L ++ + N ++ F L LQ F G T Sbjct: 966 KNDEWMHSGKVDKLCELLRRFKENGDRTLIFSQFTMVMDILEHVLQTLQMRFFRLDGSTS 1025 Query: 95 DKDPC-TIQEWNEG-KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIG 152 +D T+ ++E IP+ + G G+NL N ++ F ++ +E Q Sbjct: 1026 VEDRQSTLDAFHEQVDIPVFLLSTKAGGAGINL-ACANKVIIFDSSFNPQEDVQA----- 1079 Query: 153 VTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 R + G R V V L+ ++TI+E + +TK + + Sbjct: 1080 ENRAHRVGQTRPVEVVRLVTRDTIEEQIYALGQTKLALDQRV 1121 >gi|240281108|gb|EER44611.1| SNF2 family helicase/ATPase [Ajellomyces capsulatus H143] Length = 1181 Score = 88.8 bits (219), Expect = 4e-16, Method: Composition-based stats. Identities = 36/162 (22%), Positives = 66/162 (40%), Gaps = 19/162 (11%) Query: 46 KHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFN-------SDLARLQKAF--PQGRTL 94 K+ + +H K+ L ++ + N ++ F L LQ F G T Sbjct: 966 KNDEWMHSGKVDKLCELLRRFKENGDRTLIFSQFTMVMDILEHVLQTLQMRFFRLDGSTS 1025 Query: 95 DKDPC-TIQEWNEG-KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIG 152 +D T+ ++E IP+ + G G+NL N ++ F ++ +E Q Sbjct: 1026 VEDRQSTLDAFHEQVDIPVFLLSTKAGGAGINL-ACANKVIIFDSSFNPQEDVQA----- 1079 Query: 153 VTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 R + G R V V L+ ++TI+E + +TK + + Sbjct: 1080 ENRAHRVGQTRPVEVVRLVTRDTIEEQIYALGQTKLALDQRV 1121 >gi|255656168|ref|ZP_05401577.1| putative helicase [Clostridium difficile QCD-23m63] Length = 1013 Score = 88.8 bits (219), Expect = 4e-16, Method: Composition-based stats. Identities = 32/184 (17%), Positives = 66/184 (35%), Gaps = 24/184 (13%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSA--SKTVKCLQLA--NGAVYYDEEKHWKEVHDEKIK 57 K Y + +++ ++ +N++ S K QL V D K ++ ++ Sbjct: 837 KIYSVYSKDIQDKIKDKNLKKDKIVIFSYLTKLRQLCLDPSIVVKDYNKKSSKIETC-LE 895 Query: 58 ALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTL----------DKDPCTIQEWNEG 107 L I + + I++ F S L + K + + + + E+N Sbjct: 896 ILRDSINENH--KILLFSQFTSVLKNISKELDKYKIKYHYIDGKTNAKERLELVDEFNNS 953 Query: 108 -KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVF 166 + + G GLNL ++++ F WW+ Q +R + G K+ Sbjct: 954 IDKKVFLISLKAGGTGLNLT-SADMVIHFDPWWNPSVENQASDR-----AHRFGTKKFST 1007 Query: 167 VYYL 170 Y + Sbjct: 1008 SYKI 1011 >gi|225562463|gb|EEH10742.1| conserved hypothetical protein [Ajellomyces capsulatus G186AR] Length = 1181 Score = 88.8 bits (219), Expect = 4e-16, Method: Composition-based stats. Identities = 36/162 (22%), Positives = 66/162 (40%), Gaps = 19/162 (11%) Query: 46 KHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFN-------SDLARLQKAF--PQGRTL 94 K+ + +H K+ L ++ + N ++ F L LQ F G T Sbjct: 966 KNDEWMHSGKVDKLCELLRRFKENGDRTLIFSQFTMVMDILEHVLQTLQMRFFRLDGSTS 1025 Query: 95 DKDPC-TIQEWNEG-KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIG 152 +D T+ ++E IP+ + G G+NL N ++ F ++ +E Q Sbjct: 1026 VEDRQSTLDAFHEQVDIPVFLLSTKAGGAGINL-ACANKVIIFDSSFNPQEDVQA----- 1079 Query: 153 VTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 R + G R V V L+ ++TI+E + +TK + + Sbjct: 1080 ENRAHRVGQTRPVEVVRLVTRDTIEEQIYALGQTKLALDQRV 1121 >gi|238880563|gb|EEQ44201.1| conserved hypothetical protein [Candida albicans WO-1] Length = 864 Score = 88.8 bits (219), Expect = 4e-16, Method: Composition-based stats. Identities = 29/190 (15%), Positives = 74/190 (38%), Gaps = 28/190 (14%) Query: 28 KTVKCLQLANG-AVYYD----EEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSD 80 K ++ + N +YY+ ++ + K + L ++ ++ +++ F Sbjct: 581 KMIQLRNICNSPFIYYNYPILDQAEVIR-NSAKFQVLNQLLPPLLSSGHKVLIFAQFTKV 639 Query: 81 LARLQKAFPQGRTLD--------------KDPCTIQEWNEGKIPLLFAHPASCGHGLNLQ 126 L L+ + L +D Q N K + + G G+NL Sbjct: 640 LDLLEDWLEESPLLHGKICRLDGSTNHQIRDEQISQFNNNPKFKVFLLSTRAGGLGINL- 698 Query: 127 YGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRT 186 + ++ W+ + Q I+R+ + G V ++ + +++I+E+++ R + Sbjct: 699 VAADTVILMDNDWNPQMDLQAIDRV-----HRIGQINPVKIFRFVIKDSIEEVLISRSGS 753 Query: 187 KSTIQDLLLN 196 K ++ L++ Sbjct: 754 KRFLERLVIQ 763 >gi|326924270|ref|XP_003208353.1| PREDICTED: DNA excision repair protein ERCC-6-like [Meleagris gallopavo] Length = 1273 Score = 88.8 bits (219), Expect = 4e-16, Method: Composition-based stats. Identities = 31/145 (21%), Positives = 54/145 (37%), Gaps = 18/145 (12%) Query: 47 HWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNE 106 H V + K L IIE+ ++ + F + R+ L + I + Sbjct: 465 HRTLVFSQSRKML-DIIER-----VLSSRRFK--IMRIDG---TVTHLTEREKRINAFQS 513 Query: 107 GK-IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 K + G G+ L N +V F W+ Q ++R + G K V Sbjct: 514 NKDYSVFLLTTQVGGVGITLT-AANRVVIFDPSWNPATDAQAVDR-----AYRIGQKENV 567 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTI 190 +Y LI T++E + +R K ++ Sbjct: 568 VIYRLITCGTVEEKIYRRQVFKDSL 592 >gi|241074609|ref|XP_002408725.1| conserved hypothetical protein [Ixodes scapularis] gi|215492547|gb|EEC02188.1| conserved hypothetical protein [Ixodes scapularis] Length = 1216 Score = 88.8 bits (219), Expect = 4e-16, Method: Composition-based stats. Identities = 30/204 (14%), Positives = 60/204 (29%), Gaps = 35/204 (17%) Query: 1 MKQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIK-AL 59 M Y ++ + + N D K+ L Sbjct: 338 MGMYDDMTQDQIEEFLDKEE---------------GNSMTISDVPDDTLLAESGKMTFVL 382 Query: 60 EVIIE-KANAAPIIVAYHFNSDLARLQKAFPQGRTL------------DKDPCTIQEWNE 106 E+++ K+ + L +Q+ ++D Q Sbjct: 383 ELLLNLKSEGHRTLFFSQSRKILDIIQRILLNRGFRVTRLDGTITKLCERDRLVTQFQTR 442 Query: 107 GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVF 166 + G GL L + +V + W+ Q ++R + G + V Sbjct: 443 SLADIFLLTTQVGGVGLTLT-SADRVVIYDPSWNPATDAQAVDR-----AYRIGQSKNVV 496 Query: 167 VYYLIAQNTIDELVLQRLRTKSTI 190 VY L+ +T++E + +R K +I Sbjct: 497 VYRLVTCSTVEEKIYRRQIFKDSI 520 >gi|119192342|ref|XP_001246777.1| hypothetical protein CIMG_00548 [Coccidioides immitis RS] Length = 1432 Score = 88.8 bits (219), Expect = 4e-16, Method: Composition-based stats. Identities = 24/140 (17%), Positives = 50/140 (35%), Gaps = 18/140 (12%) Query: 68 AAPIIVAYHFNSDLARLQKAFPQGRTLD----------KDPCTIQEWNEGKIP--LLFAH 115 +++ F L ++ L + I E+N P + Sbjct: 923 GHRVLLFSQFLDFLDIIEDFLDGLGVLHLRLDGSLSSLQKQKRIDEFNAPNSPYFVFMLS 982 Query: 116 PASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNT 175 + G G+NL + ++ ++ + Q + R + G R V V+ L+ + T Sbjct: 983 TRAGGVGINL-ATADTVIIMDPDFNPHQDIQALSR-----AHRIGQHRKVLVFQLMTKGT 1036 Query: 176 IDELVLQRLRTKSTIQDLLL 195 +E ++Q R K + L+ Sbjct: 1037 AEEKIIQIGRKKMALDQALI 1056 >gi|47207122|emb|CAF91371.1| unnamed protein product [Tetraodon nigroviridis] Length = 1198 Score = 88.8 bits (219), Expect = 4e-16, Method: Composition-based stats. Identities = 27/146 (18%), Positives = 52/146 (35%), Gaps = 18/146 (12%) Query: 65 KANAAPIIVAYHFNSDLARLQKAFPQGRTL----------DKDPCTIQEWNEGKIP--LL 112 KA +++ L L+ Q R L + I +++ + Sbjct: 22 KAGGHKVLIFSQMVRCLDILEDYLIQRRYLYERIDGRVRGNLRQAAIDRFSKPDSERFVF 81 Query: 113 FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIA 172 + G G+NL + + F W+ + Q R + G +AV VY LI Sbjct: 82 LLCTRAGGLGINLT-AADTCIIFDSDWNPQNDLQAQARC-----HRIGQNKAVKVYRLIT 135 Query: 173 QNTIDELVLQRLRTKSTIQDLLLNAL 198 +N+ + + R K + +L ++ Sbjct: 136 RNSYEREMFDRASLKLGLDKAVLQSM 161 >gi|67624313|ref|XP_668439.1| DNA repair protein RAD54-like [Cryptosporidium hominis TU502] gi|54659648|gb|EAL38216.1| DNA repair protein RAD54-like [Cryptosporidium hominis] Length = 877 Score = 88.8 bits (219), Expect = 4e-16, Method: Composition-based stats. Identities = 29/160 (18%), Positives = 60/160 (37%), Gaps = 21/160 (13%) Query: 53 DEKIKALEVI---IEKANAAPIIVAYHFN----------SDLARLQKAFPQGRTLDKDPC 99 K+ L + I +++ ++ DL ++ + Sbjct: 509 SGKLYLLSRLLFHIRSNTKDRVVLVSNYTQTLDVFECLCRDLQVPCVRLDGSTSITRRHN 568 Query: 100 TIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 ++ +N+ + G G+NL G N LV F W+ +Q + R+ Sbjct: 569 LVKTFNDPNSNSFAFLLSSKAGGCGINL-IGANRLVMFDPDWNPANDKQALARVW----- 622 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + G K+ ++Y L + TI+E + QR K + +L+ + Sbjct: 623 RDGQKKNCYIYRLFSTGTIEEKIYQRQLCKDGLSAMLVTS 662 >gi|66361996|ref|XP_627962.1| RAD54 like SWI/SNF2 ATpase [Cryptosporidium parvum Iowa II] gi|46227534|gb|EAK88469.1| RAD54 like SWI/SNF2 ATpase [Cryptosporidium parvum Iowa II] Length = 877 Score = 88.8 bits (219), Expect = 4e-16, Method: Composition-based stats. Identities = 29/160 (18%), Positives = 60/160 (37%), Gaps = 21/160 (13%) Query: 53 DEKIKALEVI---IEKANAAPIIVAYHFN----------SDLARLQKAFPQGRTLDKDPC 99 K+ L + I +++ ++ DL ++ + Sbjct: 509 SGKLYLLSRLLFHIRSNTKDRVVLVSNYTQTLDVFECLCRDLQVPCVRLDGSTSITRRHN 568 Query: 100 TIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 ++ +N+ + G G+NL G N LV F W+ +Q + R+ Sbjct: 569 LVKTFNDPNSNSFAFLLSSKAGGCGINL-IGANRLVMFDPDWNPANDKQALARVW----- 622 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + G K+ ++Y L + TI+E + QR K + +L+ + Sbjct: 623 RDGQKKNCYIYRLFSTGTIEEKIYQRQLCKDGLSAMLVTS 662 >gi|259149779|emb|CAY86583.1| Isw2p [Saccharomyces cerevisiae EC1118] Length = 1121 Score = 88.8 bits (219), Expect = 4e-16, Method: Composition-based stats. Identities = 41/226 (18%), Positives = 85/226 (37%), Gaps = 43/226 (19%) Query: 6 KFQRELYCDLQGENIEAFNSAS--------KTVKCLQLAN-------------GAVYYDE 44 Q + Y L ++I+A N A +QL G Y + Sbjct: 423 DMQIQWYKSLLEKDIDAVNGAVGKREGKTRLLNIVMQLRKCCNHPYLFEGAEPGPPYTTD 482 Query: 45 EKHWKEVHDEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQ---------KAFPQGRT 93 E + K+ L+ ++++ + +++ + L L+ G T Sbjct: 483 EHLI--FNSGKMIILDKLLKRLKEKGSRVLIFSQMSRLLDILEDYCYFRDFEYCRIDGST 540 Query: 94 LDKDP-CTIQEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 ++ I E+N+ + + + G G+NL + ++ F W+ + Q ++R Sbjct: 541 SHEERIEAIDEYNKPNSEKFVFLLTTRAGGLGINL-VTADTVILFDSDWNPQADLQAMDR 599 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + G K+ V VY + +N I+E V++R K + L++ Sbjct: 600 -----AHRIGQKKQVHVYRFVTENAIEEKVIERAAQKLRLDQLVIQ 640 >gi|195498631|ref|XP_002096606.1| GE25760 [Drosophila yakuba] gi|194182707|gb|EDW96318.1| GE25760 [Drosophila yakuba] Length = 861 Score = 88.8 bits (219), Expect = 4e-16, Method: Composition-based stats. Identities = 35/151 (23%), Positives = 65/151 (43%), Gaps = 18/151 (11%) Query: 56 IKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQG--RTLD--------KDPCTIQEWN 105 I LE ++ N IIV + S LA ++K TLD ++++N Sbjct: 692 INKLEELLTGTNDK-IIVTSQWVSYLAIIRKRLQDLSWETLDFNGQLSAKDRELVLRDFN 750 Query: 106 -EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA 164 E +L + G GLNL ++L+ L W+ + +Q +RI + G + Sbjct: 751 AEPDKRVLLLSLTAGGVGLNLNVANHMLI-VDLHWNPQLERQAQDRI-----YRYGQTKP 804 Query: 165 VFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 F+Y + Q+T+++ + K I +++ Sbjct: 805 TFIYRYMCQDTVEQRIKSLQDFKLEIAKVVV 835 >gi|47228866|emb|CAG09381.1| unnamed protein product [Tetraodon nigroviridis] Length = 1286 Score = 88.8 bits (219), Expect = 4e-16, Method: Composition-based stats. Identities = 27/146 (18%), Positives = 50/146 (34%), Gaps = 17/146 (11%) Query: 67 NAAPIIVAYHFNSDLARLQK----------AFPQGRTLDKDPCTIQEWNEGK-IPLLFAH 115 +++ L L+ ++ I +NE I + Sbjct: 737 QGQRVLLFTQSRQMLNILEVFVRENNYSYLKMDGTTSISSRQPLIARYNEDNSIFIFLLT 796 Query: 116 PASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNT 175 G G+NL G N ++ + W+ Q ER + G + V +Y L+ T Sbjct: 797 TKVGGLGVNLT-GANRVIIYDPDWNPSTDTQARERAW-----RIGQTQQVTIYRLLTAGT 850 Query: 176 IDELVLQRLRTKSTIQDLLLNALKKE 201 I+E + R K + + +L K+ Sbjct: 851 IEEKIYHRQIFKQFLTNRVLKDPKQR 876 >gi|302833439|ref|XP_002948283.1| hypothetical protein VOLCADRAFT_80059 [Volvox carteri f. nagariensis] gi|300266503|gb|EFJ50690.1| hypothetical protein VOLCADRAFT_80059 [Volvox carteri f. nagariensis] Length = 1091 Score = 88.8 bits (219), Expect = 4e-16, Method: Composition-based stats. Identities = 41/221 (18%), Positives = 84/221 (38%), Gaps = 37/221 (16%) Query: 6 KFQRELYCDLQGENIEAFNSASKTVKCL----QL---ANGAVYYD---------EEKHWK 49 Q++ Y L ++I+A N + K L QL N + +H Sbjct: 410 DMQKKWYAALLQKDIDALNGGADRAKLLNVVMQLRKCCNHPYLFQGAEPGPPFITGEHLI 469 Query: 50 EVHDEKIKALEVIIEKANAA--PIIVAYHFNSDLARLQ---------KAFPQGRTL-DKD 97 E + K+ L+ ++ + +++ + L+ G T D Sbjct: 470 E-NSGKLVLLDKLLPRLKERDSRVLIFSQMTRMIDILEDYCLYRGYGYCRIDGNTGGDDR 528 Query: 98 PCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTR 155 I E+N+ + + G G+NL +I+V + W+ + Q ++R Sbjct: 529 DNMIDEFNKPNSSKFIFLLSTRAGGLGINL-ATADIVVLYDSDWNPQMDLQAMDR----- 582 Query: 156 QRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + G K+ V V+ +N+I+E V+++ K + L++ Sbjct: 583 AHRIGQKKEVQVFRFCIENSIEEKVIEKAYKKLRLDALVIQ 623 >gi|299755187|ref|XP_001828488.2| SNF2-family ATP dependent chromatin remodeling factor snf21 [Coprinopsis cinerea okayama7#130] gi|298411108|gb|EAU93321.2| SNF2-family ATP dependent chromatin remodeling factor snf21 [Coprinopsis cinerea okayama7#130] Length = 1471 Score = 88.8 bits (219), Expect = 4e-16, Method: Composition-based stats. Identities = 36/227 (15%), Positives = 82/227 (36%), Gaps = 35/227 (15%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASK--TVKCLQLANGAVY------YDEEKHWKEVHD 53 + Y + ++ ++ + + K + + +QL + +++ + D Sbjct: 835 QLYKQMKKHKMIADGNKDNKGKSGGIKGLSNELMQLRKICQHPFLFESVEDKMNPSGWID 894 Query: 54 EKI-------KALEVIIEK--ANAAPIIVAYHFNSDLARLQK----------AFPQGRTL 94 K+ + L I+ K A +++ + + ++ G Sbjct: 895 NKLIRASGKVELLSRILPKFFATGHRVLIFFQMTKVMDIMEDFLKFMGWKYLRLDGGTKT 954 Query: 95 DKDPCTIQEWNEGK--IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIG 152 ++ +Q +N + + G GLNLQ + ++ F W+ Q Sbjct: 955 EERAQFVQLFNSKDSEYMVFILSTRAGGLGLNLQT-ADTVIIFDSDWNPHADLQA----- 1008 Query: 153 VTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 R + G RAV + I + +++E + QR R K I D ++ A + Sbjct: 1009 QDRAHRIGQTRAVLILRFITEKSVEEAMYQRARYKLDIDDKVIQAGR 1055 >gi|255081212|ref|XP_002507828.1| SNF2 super family [Micromonas sp. RCC299] gi|226523104|gb|ACO69086.1| SNF2 super family [Micromonas sp. RCC299] Length = 1983 Score = 88.8 bits (219), Expect = 4e-16, Method: Composition-based stats. Identities = 25/141 (17%), Positives = 50/141 (35%), Gaps = 17/141 (12%) Query: 66 ANAAPIIVAYHFN---------SDLARLQKAFPQGRTLDKDPCT-IQEWNE-GKIPLLFA 114 A +++ F DL + G T D I +N GK + Sbjct: 910 AEGHKVLIFSQFAIVLNILSDYLDLMGYEHERLDGSTSQADRQAGIDRFNTPGKGFVYLL 969 Query: 115 HPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQN 174 + G G+ L + + + W+ + Q + R + G + V VY L+ + Sbjct: 970 STRAGGMGITLT-AADTAIIYDSDWNPQNDLQAMARC-----HRIGQTKEVKVYRLVTKA 1023 Query: 175 TIDELVLQRLRTKSTIQDLLL 195 T ++ + + K + + +L Sbjct: 1024 TYEQSLFETSSKKYGLDEAVL 1044 >gi|219112733|ref|XP_002178118.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1] gi|217411003|gb|EEC50932.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1] Length = 995 Score = 88.8 bits (219), Expect = 4e-16, Method: Composition-based stats. Identities = 32/217 (14%), Positives = 80/217 (36%), Gaps = 28/217 (12%) Query: 3 QYHKFQRELYCD--LQGENIEAFNSA--SKTVKCLQLANGAVYYDEEK----HWKEVHDE 54 Y + ++ D L G + +A + + ++ ++ N + E Sbjct: 505 LYKQISKKAVADTALMGTDTQAPSRGLNNIVMQLRKVCNHPYLFSPEGYHINDIIVRSSG 564 Query: 55 KIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAF----------PQGRTLDKDPCTIQ 102 K+ L+ ++ +A +++ + + ++ F ++ + Sbjct: 565 KMALLDQMLPKLRAAGHRVLMFTQMTAVMTIMEDYFALRGYKSLRLDGSTPAEEREKRMY 624 Query: 103 EWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 ++N P + + G GLNL + ++ F W+ Q R + G Sbjct: 625 KFNAPDSPYFVFLLSTRAGGLGLNLT-SADTVIIFDSDWNPMMDLQA-----QDRAHRIG 678 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + V V+ LI + ++E +L R K ++ +L++ + Sbjct: 679 QRSDVSVFRLITYSPVEEKILSRANEKLSVSELVVES 715 >gi|190407604|gb|EDV10871.1| ATPase component of a two subunit chromatin remodeling complex [Saccharomyces cerevisiae RM11-1a] Length = 1121 Score = 88.8 bits (219), Expect = 4e-16, Method: Composition-based stats. Identities = 41/226 (18%), Positives = 85/226 (37%), Gaps = 43/226 (19%) Query: 6 KFQRELYCDLQGENIEAFNSAS--------KTVKCLQLAN-------------GAVYYDE 44 Q + Y L ++I+A N A +QL G Y + Sbjct: 423 DMQIQWYKSLLEKDIDAVNGAVGKREGKTRLLNIVMQLRKCCNHPYLFEGAEPGPPYTTD 482 Query: 45 EKHWKEVHDEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQ---------KAFPQGRT 93 E + K+ L+ ++++ + +++ + L L+ G T Sbjct: 483 EHLI--FNSGKMIILDKLLKRLKEKGSRVLIFSQMSRLLDILEDYCYFRDFEYCRIDGST 540 Query: 94 LDKDP-CTIQEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 ++ I E+N+ + + + G G+NL + ++ F W+ + Q ++R Sbjct: 541 SHEERIEAIDEYNKPNSEKFVFLLTTRAGGLGINL-VTADTVILFDSDWNPQADLQAMDR 599 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + G K+ V VY + +N I+E V++R K + L++ Sbjct: 600 -----AHRIGQKKQVHVYRFVTENAIEEKVIERAAQKLRLDQLVIQ 640 >gi|320167296|gb|EFW44195.1| SNF2 family DNA-dependent ATPase [Capsaspora owczarzaki ATCC 30864] Length = 2352 Score = 88.8 bits (219), Expect = 4e-16, Method: Composition-based stats. Identities = 29/165 (17%), Positives = 66/165 (40%), Gaps = 23/165 (13%) Query: 52 HDEKIKALEVIIEK--ANAAPIIVAYHFN------SDLARLQKAFPQGRTLDKDP----- 98 K+ L +++ + A +++ F D + +P LD D Sbjct: 1563 ASGKLLLLHIMLPRLLAAGHRVLIFSTFKIVLDVLHDY-LIANGYPDFCRLDGDSPSDTR 1621 Query: 99 -CTIQEWNEGK--IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTR 155 I +N + + + + G G+NL Y + ++ F ++ + QQ I R Sbjct: 1622 QHLIDRFNRREEGLNIFMLSTRAGGLGINL-YTADTVILFDSDFNPQADQQAIAR----- 1675 Query: 156 QRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKK 200 + G V Y + T++E + R ++K ++ ++++++ K Sbjct: 1676 AHRHGQTHPVVAYRFVTVGTVEEAIWTRSQSKLFLEHVVVDSMSK 1720 >gi|39978259|ref|XP_370517.1| hypothetical protein MGG_07014 [Magnaporthe oryzae 70-15] gi|145013403|gb|EDJ98044.1| hypothetical protein MGG_07014 [Magnaporthe oryzae 70-15] Length = 986 Score = 88.8 bits (219), Expect = 4e-16, Method: Composition-based stats. Identities = 30/176 (17%), Positives = 65/176 (36%), Gaps = 28/176 (15%) Query: 51 VHDEKIKAL----EVIIEKANAAPIIVAYHFNSDLA----RLQKAFPQGRTLD------K 96 K++ L + + ++ I+ F L RL++A LD + Sbjct: 811 TSSTKMEMLVHSLQKLRSDNSSHKSIIFSQFTGMLQLIEWRLRRAGITTVMLDGSMTPAQ 870 Query: 97 DPCTIQEW-NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTR 155 +I + N + + G LNL + + WW+ Q +R+ Sbjct: 871 RAASIDHFMNNVDVECFLVSLKAGGVALNLTEASRVFI-VDPWWNPAAEWQSADRV---- 925 Query: 156 QRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTI-------QDLLLNALKKETIH 204 + G R V + L +++I+ +++ K+ + D+ L++L+ E + Sbjct: 926 -HRIGQTRPVVITRLCIEDSIESRIVELQEKKTKMINSTVNSDDVALDSLEPEDLQ 980 >gi|83774068|dbj|BAE64193.1| unnamed protein product [Aspergillus oryzae] Length = 1471 Score = 88.8 bits (219), Expect = 4e-16, Method: Composition-based stats. Identities = 30/151 (19%), Positives = 59/151 (39%), Gaps = 20/151 (13%) Query: 51 VHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQKAFP-QGRTLDK---------DP 98 K+ L+ ++ K + +++ L L + +G T + Sbjct: 712 TSSGKMMLLDQLLAKLKRDGHRVLIFSQMVKMLDLLGEYMEFRGYTYQRLDGTIPAASRR 771 Query: 99 CTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 I+ +N + G G+NL + +V F W+ + Q + R Sbjct: 772 LAIEHYNAPGSSDFAFILSTRAGGLGINLMT-ADTVVLFDSDWNPQADLQAMAR-----A 825 Query: 157 RQAGFKRAVFVYYLIAQNTIDELVLQRLRTK 187 + G R V VY L++++T++E V++R R K Sbjct: 826 HRIGQTRPVSVYRLVSKDTVEEEVIERARNK 856 >gi|207340908|gb|EDZ69113.1| YOR304Wp-like protein [Saccharomyces cerevisiae AWRI1631] Length = 1121 Score = 88.8 bits (219), Expect = 4e-16, Method: Composition-based stats. Identities = 41/226 (18%), Positives = 85/226 (37%), Gaps = 43/226 (19%) Query: 6 KFQRELYCDLQGENIEAFNSAS--------KTVKCLQLAN-------------GAVYYDE 44 Q + Y L ++I+A N A +QL G Y + Sbjct: 423 DMQIQWYKSLLEKDIDAVNGAVGKREGKTRLLNIVMQLRKCCNHPYLFEGAEPGPPYTTD 482 Query: 45 EKHWKEVHDEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQ---------KAFPQGRT 93 E + K+ L+ ++++ + +++ + L L+ G T Sbjct: 483 EHLI--FNSGKMIILDKLLKRLKEKGSRVLIFSQMSRLLDILEDYCYFRDFEYCRIDGST 540 Query: 94 LDKDP-CTIQEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 ++ I E+N+ + + + G G+NL + ++ F W+ + Q ++R Sbjct: 541 SHEERIEAIDEYNKPNSEKFVFLLTTRAGGLGINL-VTADTVILFDSDWNPQADLQAMDR 599 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + G K+ V VY + +N I+E V++R K + L++ Sbjct: 600 -----AHRIGQKKQVHVYRFVTENAIEEKVIERAAQKLRLDQLVIQ 640 >gi|164659924|ref|XP_001731086.1| hypothetical protein MGL_2085 [Malassezia globosa CBS 7966] gi|159104984|gb|EDP43872.1| hypothetical protein MGL_2085 [Malassezia globosa CBS 7966] Length = 789 Score = 88.8 bits (219), Expect = 4e-16, Method: Composition-based stats. Identities = 25/160 (15%), Positives = 57/160 (35%), Gaps = 17/160 (10%) Query: 38 GAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKA---------- 87 + + D ++ L+ ++ IV F S L ++ A Sbjct: 631 HGIIWGMPGTMSTKLDMMLRLLDDFDNQSKGDKTIVFSQFTSFLDLVEDALRARGYNFTR 690 Query: 88 FPQGRTLDKDPCTIQEWNEGK-IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 + + +Q + ++ + GLNL N ++ LWW+ + +Q Sbjct: 691 YDGSMRRNAREEALQRIRTDDGVRVILISFKAGSTGLNLTC-CNRVILCDLWWNPQIEEQ 749 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRT 186 +R + G ++V++Y L T+++ +L + Sbjct: 750 AFDR-----AHRLGQTKSVYIYKLSIDGTVEQRILALQTS 784 >gi|156357062|ref|XP_001624043.1| predicted protein [Nematostella vectensis] gi|156210795|gb|EDO31943.1| predicted protein [Nematostella vectensis] Length = 863 Score = 88.8 bits (219), Expect = 4e-16, Method: Composition-based stats. Identities = 25/160 (15%), Positives = 59/160 (36%), Gaps = 19/160 (11%) Query: 51 VHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQKAF---------PQGRTLDKDP- 98 K+ A++ ++ +++ L +Q G ++ Sbjct: 316 TASGKLHAIDQLLSYLYKRGHKVLMFSQMTRMLDIVQDYLGYRGYAYERLDGSVRGEERY 375 Query: 99 CTIQEWNEG-KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 I+ +NE + + G GLNL + ++F ++ + Q R Sbjct: 376 IAIKNFNEEQDNFIFLLSTKAGGQGLNL-MSADTVIFVDSDYNPQNDLQAAAR-----AH 429 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + G R V + L+ +NT++E++L+ K + + ++ Sbjct: 430 RIGQTRPVKIIRLVGRNTVEEIILKHADDKMRLTNNVIEG 469 >gi|322799536|gb|EFZ20844.1| hypothetical protein SINV_13363 [Solenopsis invicta] Length = 305 Score = 88.5 bits (218), Expect = 4e-16, Method: Composition-based stats. Identities = 24/142 (16%), Positives = 54/142 (38%), Gaps = 20/142 (14%) Query: 69 APIIVAYHFNSDLARLQK-------------AFPQGRTLDKDPCTIQEWN-EGKIPLLFA 114 ++ + L +++ + + +N + I +L Sbjct: 65 HRALIFCQLKAMLDIVEEDLLRTHLPTVTYLRLDGSVPATQRHSVVARFNADPSIDVLLL 124 Query: 115 HPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQN 174 G GLNL G + ++F W+ + Q ++R + G K+ V VY LI + Sbjct: 125 TTQVGGLGLNLT-GADTVIFVEHDWNPMKDLQAMDR-----AHRIGQKKVVNVYRLITRA 178 Query: 175 TIDELVLQRLRTKSTIQDLLLN 196 T++E ++ + K + +++ Sbjct: 179 TVEEKIMGLQKFKLLTANTIIS 200 >gi|149024737|gb|EDL81234.1| rCG30890, isoform CRA_a [Rattus norvegicus] Length = 1668 Score = 88.5 bits (218), Expect = 4e-16, Method: Composition-based stats. Identities = 22/160 (13%), Positives = 54/160 (33%), Gaps = 20/160 (12%) Query: 45 EKHWKEVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQ----------KAFPQGR 92 + K+ L+ +++K +++ L L+ + G Sbjct: 741 DGSSLVKSSGKLMLLQKMLKKLRDEGHRVLIFSQMTKMLDLLEDFLEYEGYKYERIDGGI 800 Query: 93 TLDKDPCTIQEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 T I +N + + G G+NL + ++ + W+ Q Sbjct: 801 TGGLRQEAIDRFNAPGAQQFCFLLSTRAGGLGINL-ATADTVIIYDSDWNPHNDIQA--- 856 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 +R + G + V +Y + + +++E + Q + K + Sbjct: 857 --FSRAHRIGQNKKVMIYRFVTRASVEERITQVAKRKMML 894 >gi|322493154|emb|CBZ28439.1| putative DNA repair protein [Leishmania mexicana MHOM/GT/2001/U1103] Length = 736 Score = 88.5 bits (218), Expect = 5e-16, Method: Composition-based stats. Identities = 30/153 (19%), Positives = 63/153 (41%), Gaps = 17/153 (11%) Query: 56 IKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRT----------LDKDPCTIQEWN 105 ++++ + + A +I+ F S + + A + L I+++ Sbjct: 510 LRSIHDMQKNHPADKMIIFSQFTSFMDVISVALDRYNIAFLRIDGTMSLSNRNAVIRQFQ 569 Query: 106 EGK-IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA 164 + I ++ A + G GLNL +++V WW+ +Q + R + G K+ Sbjct: 570 TTEHIKIVLASKTATGVGLNLTAANHVVV-VDPWWNPAIEEQAVHRC-----YRIGQKKP 623 Query: 165 VFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 V+V I +TI++ + + K D +L A Sbjct: 624 VYVTRFIIADTIEQYCYEICQRKKEFGDAVLRA 656 >gi|172320|gb|AAA34930.1| excision repair protein [Saccharomyces cerevisiae] Length = 392 Score = 88.5 bits (218), Expect = 5e-16, Method: Composition-based stats. Identities = 29/169 (17%), Positives = 60/169 (35%), Gaps = 23/169 (13%) Query: 43 DEEKHWKEVHDEKIKAL-EVIIE-KANAAPI--IVAYHFNSDLARLQKAFPQG------- 91 + W+ KI+AL E + + ++N I IV F S L ++ + Sbjct: 212 NMSGKWQ--SSTKIEALVEELYKLRSNKRTIKSIVFSQFTSMLDLVEWRLKRAGFQTVKL 269 Query: 92 ----RTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQM 147 +D N + + + G LNL + + WW+ Q Sbjct: 270 QGSMSPTQRDETIKYFMNNIQCEVFLVSLKAGGVALNLCEASQVFIL-DPWWNPSVEWQS 328 Query: 148 IERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 +R+ + G R V + +++I+ +++ K+ + +N Sbjct: 329 GDRV-----HRIGQYRPVKITRFCIEDSIEARIIELQEKKANMIHATIN 372 >gi|290994819|ref|XP_002680029.1| SWI/SNF-related matrix-associated actin-dependent regulator of chromatin [Naegleria gruberi] gi|284093648|gb|EFC47285.1| SWI/SNF-related matrix-associated actin-dependent regulator of chromatin [Naegleria gruberi] Length = 1283 Score = 88.5 bits (218), Expect = 5e-16, Method: Composition-based stats. Identities = 29/167 (17%), Positives = 56/167 (33%), Gaps = 20/167 (11%) Query: 47 HWKEVHDEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQK----------AFPQGRTL 94 W K + L I K +++ L ++ Sbjct: 796 DWMCRSSGKFELLSRIFPKLKRTGHRVLLFSQMTQILDIFEEFLSHLGYEYLRLDGAVNA 855 Query: 95 DKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIG 152 +++WN P + S G GLNLQ + ++ F W+ ++ Q + R Sbjct: 856 ADRGTLVKQWNAKDSPYFVFLLSTRSGGLGLNLQT-ADTVIMFDSDWNPQQDLQAMAR-- 912 Query: 153 VTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 + G ++V V + ++E V R + K + ++ A K Sbjct: 913 ---AHRIGQTKSVLVLTFCTRTPVEEKVRDRAQEKRDAEAKVIKAGK 956 >gi|296083825|emb|CBI24213.3| unnamed protein product [Vitis vinifera] Length = 1539 Score = 88.5 bits (218), Expect = 5e-16, Method: Composition-based stats. Identities = 27/167 (16%), Positives = 61/167 (36%), Gaps = 20/167 (11%) Query: 51 VHDEKIKALEVIIEKANA--APIIVAYHFNSDLARLQKAF---------PQGRTLDK-DP 98 + K+ L+ ++EK + +++ L L + G T + Sbjct: 734 LSSGKLVLLDKLLEKLHETNHRVLIFSQMVRMLDILAEYMSLRGFQFQRLDGSTKAELRQ 793 Query: 99 CTIQEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 + +N + G G+NL + ++ F W+ + Q + R Sbjct: 794 QAMDHFNAPGSDDFCFLLSTRAGGLGINL-ATADTVIIFDSDWNPQNDLQAMSR-----A 847 Query: 157 RQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETI 203 + G + V +Y + +++E +L+R + K + L++ L E Sbjct: 848 HRIGQREVVNIYRFVTSKSVEENILKRAKQKMVLDHLVIQKLNAEGR 894 >gi|255956037|ref|XP_002568771.1| Pc21g17740 [Penicillium chrysogenum Wisconsin 54-1255] gi|211590482|emb|CAP96671.1| Pc21g17740 [Penicillium chrysogenum Wisconsin 54-1255] Length = 968 Score = 88.5 bits (218), Expect = 5e-16, Method: Composition-based stats. Identities = 42/205 (20%), Positives = 74/205 (36%), Gaps = 34/205 (16%) Query: 5 HKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEV-----HDEKIKAL 59 +R+ C L +I ++ L + AV E+ E KI+ L Sbjct: 751 QVIERQHKCPLCRADINETST---------LVSPAVELSEDTDTIEADHPNSPSSKIETL 801 Query: 60 EVIIEK---ANAAPIIVAYHFNSDLARLQKAFPQGRTL----------DKDPCTIQEWNE 106 I+ A +V + S L ++ Q K +I ++ Sbjct: 802 VKILTAQGQAPGTKTVVFSQWTSFLDLIEPHLQQRGVKFARVDGKMQSVKRDNSINSFSS 861 Query: 107 G-KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 + +L A + C GLNL N ++ WW Q ++R+ + G KR Sbjct: 862 DTQCTILLASLSVCSVGLNL-VAANQVILCDSWWAPAIEDQAVDRV-----YRLGQKRET 915 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTI 190 V+ L+ +++I+E VL K + Sbjct: 916 TVWRLVMEDSIEERVLAIQERKRRL 940 >gi|151945386|gb|EDN63629.1| ATPase component of a two subunit chromatin remodeling complex [Saccharomyces cerevisiae YJM789] Length = 1120 Score = 88.5 bits (218), Expect = 5e-16, Method: Composition-based stats. Identities = 41/226 (18%), Positives = 85/226 (37%), Gaps = 43/226 (19%) Query: 6 KFQRELYCDLQGENIEAFNSAS--------KTVKCLQLAN-------------GAVYYDE 44 Q + Y L ++I+A N A +QL G Y + Sbjct: 423 DMQIQWYKSLLEKDIDAVNGAVGKREGKTRLLNIVMQLRKCCNHPYLFEGAEPGPPYTTD 482 Query: 45 EKHWKEVHDEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQ---------KAFPQGRT 93 E + K+ L+ ++++ + +++ + L L+ G T Sbjct: 483 EHLI--FNSGKMIILDKLLKRLKEKGSRVLIFSQMSRLLDILEDYCYFRDFEYCRIDGST 540 Query: 94 LDKDP-CTIQEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 ++ I E+N+ + + + G G+NL + ++ F W+ + Q ++R Sbjct: 541 SHEERIEAIDEYNKPNSEKFVFLLTTRAGGLGINL-VTADTVILFDSDWNPQADLQAMDR 599 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + G K+ V VY + +N I+E V++R K + L++ Sbjct: 600 -----AHRIGQKKQVHVYRFVTENAIEEKVIERAAQKLRLDQLVIQ 640 >gi|297666624|ref|XP_002811619.1| PREDICTED: chromodomain-helicase-DNA-binding protein 5-like [Pongo abelii] Length = 1048 Score = 88.5 bits (218), Expect = 5e-16, Method: Composition-based stats. Identities = 22/160 (13%), Positives = 54/160 (33%), Gaps = 20/160 (12%) Query: 45 EKHWKEVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQ----------KAFPQGR 92 + K+ L+ +++K +++ L L+ + G Sbjct: 600 DGSSLVKSSGKLMLLQKMLKKLRDEGHRVLIFSQMTKMLDLLEDFLEYEGYKYERIDGGI 659 Query: 93 TLDKDPCTIQEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 T I +N + + G G+NL + ++ + W+ Q Sbjct: 660 TGGLRQEAIDRFNAPGAQQFCFLLSTRAGGLGINL-ATADTVIIYDSDWNPHNDIQA--- 715 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 +R + G + V +Y + + +++E + Q + K + Sbjct: 716 --FSRAHRIGQNKKVMIYRFVTRASVEERITQVAKRKMML 753 >gi|256272525|gb|EEU07504.1| Isw2p [Saccharomyces cerevisiae JAY291] Length = 1121 Score = 88.5 bits (218), Expect = 5e-16, Method: Composition-based stats. Identities = 41/226 (18%), Positives = 85/226 (37%), Gaps = 43/226 (19%) Query: 6 KFQRELYCDLQGENIEAFNSAS--------KTVKCLQLAN-------------GAVYYDE 44 Q + Y L ++I+A N A +QL G Y + Sbjct: 423 DMQIQWYKSLLEKDIDAVNGAVGKREGKTRLLNIVMQLRKCCNHPYLFEGAEPGPPYTTD 482 Query: 45 EKHWKEVHDEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQ---------KAFPQGRT 93 E + K+ L+ ++++ + +++ + L L+ G T Sbjct: 483 EHLI--FNSGKMIILDKLLKRLKEKGSRVLIFSQMSRLLDILEDYCYFRDFEYCRIDGST 540 Query: 94 LDKDP-CTIQEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 ++ I E+N+ + + + G G+NL + ++ F W+ + Q ++R Sbjct: 541 SHEERIEAIDEYNKPNSEKFVFLLTTRAGGLGINL-VTADTVILFDSDWNPQADLQAMDR 599 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + G K+ V VY + +N I+E V++R K + L++ Sbjct: 600 -----AHRIGQKKQVHVYRFVTENAIEEKVIERAAQKLRLDQLVIQ 640 >gi|302782409|ref|XP_002972978.1| hypothetical protein SELMODRAFT_413336 [Selaginella moellendorffii] gi|300159579|gb|EFJ26199.1| hypothetical protein SELMODRAFT_413336 [Selaginella moellendorffii] Length = 937 Score = 88.5 bits (218), Expect = 5e-16, Method: Composition-based stats. Identities = 35/175 (20%), Positives = 66/175 (37%), Gaps = 21/175 (12%) Query: 38 GAVYYDEE--KHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQK------- 86 G + DE + K+ AL+ ++ K + +++ + L L+K Sbjct: 496 GGIQPDESFLGLSDSQNCGKMLALKNLLSKWTSQGDKVLLFSYSVRMLGILEKFLIRRGY 555 Query: 87 ---AFPQGRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLE 142 ++ + E+N + + G GLNL N +V F W+ Sbjct: 556 CFCRLDGSTPMNARQGIVDEFNTSPSKQVFLISTRAGGLGLNL-VSANRVVVFDPNWNPA 614 Query: 143 EHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + Q R + G KR V V+ L+A +++EL+ R K + +L + Sbjct: 615 QDLQA-----QDRSFRFGQKRHVTVFRLLAAGSLEELIYTRQIYKQQLFNLAVTG 664 >gi|260949835|ref|XP_002619214.1| hypothetical protein CLUG_00373 [Clavispora lusitaniae ATCC 42720] gi|238846786|gb|EEQ36250.1| hypothetical protein CLUG_00373 [Clavispora lusitaniae ATCC 42720] Length = 1162 Score = 88.5 bits (218), Expect = 5e-16, Method: Composition-based stats. Identities = 19/144 (13%), Positives = 54/144 (37%), Gaps = 19/144 (13%) Query: 67 NAAPIIVAYHFNSDLARLQKAFPQGRTL----------DKDPCTIQEWNEGK---IPLLF 113 +++ F L + + + D+ I +N + Sbjct: 928 GGHKVLIFSQFTKILELIGVCLDEDKIKYSLLTGNIFQDEREDEIALFNSEDEDSTKIFL 987 Query: 114 AHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQ 173 + G G+NL + ++ F W+ + Q + R + G + V V+ + + Sbjct: 988 LSTRAGGLGINLTT-ADTVILFDSDWNPQMDIQAMGR-----AHRIGQTKPVKVFRFVVR 1041 Query: 174 NTIDELVLQRLRTKSTIQDLLLNA 197 ++++E++L + +K ++ ++ + Sbjct: 1042 DSVEEILLFKSFSKRALEQKVIKS 1065 >gi|323450700|gb|EGB06580.1| hypothetical protein AURANDRAFT_71986 [Aureococcus anophagefferens] Length = 1131 Score = 88.5 bits (218), Expect = 5e-16, Method: Composition-based stats. Identities = 28/112 (25%), Positives = 49/112 (43%), Gaps = 10/112 (8%) Query: 95 DKDPCTIQEWNEGK--IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIG 152 K ++N+ + G GLNL GG+ LV F L W+ +Q R Sbjct: 550 KKRKQFNDDFNDPGSGYFAFLLSSKAGGCGLNL-IGGSRLVMFDLDWNPATDKQAAARCW 608 Query: 153 VTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIH 204 + G K + Y ++ T++E +LQR +K +Q+++ + K + H Sbjct: 609 -----RDGQKYQCYTYRFVSTGTLEERMLQRQLSKEGLQNVIED--KAQVNH 653 >gi|238503544|ref|XP_002383005.1| RSC complex subunit (Sth1), putative [Aspergillus flavus NRRL3357] gi|220690476|gb|EED46825.1| RSC complex subunit (Sth1), putative [Aspergillus flavus NRRL3357] Length = 1095 Score = 88.5 bits (218), Expect = 5e-16, Method: Composition-based stats. Identities = 31/162 (19%), Positives = 63/162 (38%), Gaps = 20/162 (12%) Query: 52 HDEKIKALEVIIE--KANAAPIIVAYHFNSD---------LARLQKAFPQGRTLDKDPCT 100 K + L+ I+ +A +++ + L ++ G T D Sbjct: 595 TSGKFELLDRILPKFRATGHRVLMFFQMTQIMNIMEDFLRLRGMKYLRLDGSTKSDDRSD 654 Query: 101 I-QEWN--EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 + + +N + + G GLNLQ + ++ F W+ + Q R Sbjct: 655 LLKLFNAENSEYFCFLLSTRAGGLGLNLQ-SADTVIIFDSDWNPHQDLQA-----QDRAH 708 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 + G K V + LI+ N+++E +L+R + K + ++ A K Sbjct: 709 RIGQKNEVRILRLISSNSVEEKILERAQFKLDMDGKVIQAGK 750 >gi|159123101|gb|EDP48221.1| DNA excision repair protein Rad16, putative [Aspergillus fumigatus A1163] Length = 940 Score = 88.5 bits (218), Expect = 5e-16, Method: Composition-based stats. Identities = 30/168 (17%), Positives = 57/168 (33%), Gaps = 21/168 (12%) Query: 51 VHDEKIKALE----VIIEKANAAPIIVAYHFNSDLA----RLQKAFPQGRTLDKDPCTIQ 102 KI+ L + + IV F S L RL++A LD Q Sbjct: 764 TSSTKIEMLVYELYKLRSQKQTHKSIVFSQFTSMLQLVEWRLRRAGFNTVMLDGTMTPAQ 823 Query: 103 EW-------NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTR 155 N + + + G LNL + + WW+ Q +R Sbjct: 824 RQRSIDYFMNNVDVEVFLVSLKAGGVALNLTEASRVFI-VDPWWNPAAEWQSADRC---- 878 Query: 156 QRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETI 203 + G +R + L +++++ ++ K+ + + LN + E + Sbjct: 879 -HRIGQRRPCVITRLCIEDSVESRIVLLQEKKANLINGTLNKDQGEAL 925 >gi|156839555|ref|XP_001643467.1| hypothetical protein Kpol_1006p5 [Vanderwaltozyma polyspora DSM 70294] gi|156114079|gb|EDO15609.1| hypothetical protein Kpol_1006p5 [Vanderwaltozyma polyspora DSM 70294] Length = 746 Score = 88.5 bits (218), Expect = 5e-16, Method: Composition-based stats. Identities = 30/169 (17%), Positives = 60/169 (35%), Gaps = 23/169 (13%) Query: 43 DEEKHWKEVHDEKIKAL-EVIIE-KANAAPI--IVAYHFNSDLARLQKAFPQG------- 91 + +WK KI+AL E + + ++N I IV F S L ++ + Sbjct: 566 NMGGNWK--SSTKIEALVEELYKLRSNVRTIKSIVFSQFTSMLDLVEWRLKRAGFETVKL 623 Query: 92 ----RTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQM 147 +D N + + G LNL + + WW+ Q Sbjct: 624 QGSMSPTQRDETIKYFMNNINCEVFLVSLKAGGVALNLCEASQVFIL-DPWWNPSVEWQS 682 Query: 148 IERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 +R+ + G R V + +++I+ +++ K+ + +N Sbjct: 683 GDRV-----HRIGQYRPVKITRFCIEDSIESRIIELQEKKANMIHATIN 726 >gi|134080909|emb|CAK46426.1| unnamed protein product [Aspergillus niger] Length = 971 Score = 88.5 bits (218), Expect = 5e-16, Method: Composition-based stats. Identities = 26/143 (18%), Positives = 51/143 (35%), Gaps = 17/143 (11%) Query: 72 IVAYHFNSDLA----RLQKAFPQGRTLDKDPCTIQEWN-------EGKIPLLFAHPASCG 120 IV F S L RL++A LD Q N + + + G Sbjct: 820 IVFSQFTSMLQLVEWRLRRAGFNTVMLDGTMTPAQRQNSIEYFMNNVDVEVFLVSLKAGG 879 Query: 121 HGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELV 180 LNL + + WW+ Q +R + G +R + L +++++ + Sbjct: 880 VALNLTEASRVFI-VDPWWNPAAEWQSADRC-----HRIGQRRPCVITRLCIEDSVESRI 933 Query: 181 LQRLRTKSTIQDLLLNALKKETI 203 + K+ + + +N + E + Sbjct: 934 VLLQEKKANLINGTINKDQGEAL 956 >gi|70987425|ref|XP_749126.1| DNA excision repair protein Rad16 [Aspergillus fumigatus Af293] gi|66846756|gb|EAL87088.1| DNA excision repair protein Rad16, putative [Aspergillus fumigatus Af293] Length = 940 Score = 88.5 bits (218), Expect = 5e-16, Method: Composition-based stats. Identities = 30/168 (17%), Positives = 57/168 (33%), Gaps = 21/168 (12%) Query: 51 VHDEKIKALE----VIIEKANAAPIIVAYHFNSDLA----RLQKAFPQGRTLDKDPCTIQ 102 KI+ L + + IV F S L RL++A LD Q Sbjct: 764 TSSTKIEMLVYELYKLRSQKQTHKSIVFSQFTSMLQLVEWRLRRAGFNTVMLDGTMTPAQ 823 Query: 103 EW-------NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTR 155 N + + + G LNL + + WW+ Q +R Sbjct: 824 RQRSIDYFMNNVDVEVFLVSLKAGGVALNLTEASRVFI-VDPWWNPAAEWQSADRC---- 878 Query: 156 QRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETI 203 + G +R + L +++++ ++ K+ + + LN + E + Sbjct: 879 -HRIGQRRPCVITRLCIEDSVESRIVLLQEKKANLINGTLNKDQGEAL 925 >gi|320167261|gb|EFW44160.1| hypothetical protein CAOG_02185 [Capsaspora owczarzaki ATCC 30864] Length = 1223 Score = 88.5 bits (218), Expect = 5e-16, Method: Composition-based stats. Identities = 28/153 (18%), Positives = 56/153 (36%), Gaps = 21/153 (13%) Query: 53 DEKIKALEVIIEKANAA----PIIVAYHFNSDLARLQK----------AFPQGRTLDKDP 98 K+ L I+E+ +V + S L L++ + Sbjct: 1031 SCKMVRLLQILEETRNTDSTIKTVVFSQWTSMLDLLEQPLAINKFQFTRLDGRMGRRQRE 1090 Query: 99 CTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 +Q ++ + + + GLNL G ++V WW Q ++R+ Sbjct: 1091 KALQAFDSDPAVTVFLISLKCGSLGLNLTAGSQVVVL-DPWWCPSAEDQAVDRV-----Y 1144 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 + G R V V + ++T++E VL+ + K + Sbjct: 1145 RLGQMRPVVVRSIFVRDTVEESVLKLQQAKRDL 1177 >gi|307109027|gb|EFN57266.1| hypothetical protein CHLNCDRAFT_143830 [Chlorella variabilis] Length = 491 Score = 88.5 bits (218), Expect = 5e-16, Method: Composition-based stats. Identities = 28/109 (25%), Positives = 43/109 (39%), Gaps = 8/109 (7%) Query: 87 AFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 G + K + +N + + G GLNL G N LV W+ Q Sbjct: 213 RIDGGTDVGKRQDVVNSFNRHG--VFLLSTTAGGAGLNLT-GANRLVLLDSHWNPAMDLQ 269 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 + R+ + G K+A VY L+ T+DE + QR K I ++ Sbjct: 270 AMARVW-----RDGQKKACVVYRLLTTGTLDEKMYQRQLKKGDIAATMM 313 >gi|212532483|ref|XP_002146398.1| DNA excision repair protein Rad16, putative [Penicillium marneffei ATCC 18224] gi|210071762|gb|EEA25851.1| DNA excision repair protein Rad16, putative [Penicillium marneffei ATCC 18224] Length = 951 Score = 88.5 bits (218), Expect = 5e-16, Method: Composition-based stats. Identities = 29/168 (17%), Positives = 57/168 (33%), Gaps = 21/168 (12%) Query: 51 VHDEKIKALE----VIIEKANAAPIIVAYHFNSDLA----RLQKAFPQGRTLDKDPCTIQ 102 KI+ L + K IV F S L RL++A LD Q Sbjct: 775 TSSTKIEMLVYDLYKLRSKKQTHKSIVFSQFTSMLQLVEWRLRRAGFNTVMLDGSMTPTQ 834 Query: 103 EWN-------EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTR 155 N + + + G LNL + + WW+ Q +R Sbjct: 835 RQNSIDHFMKNVDVEVFLVSLKAGGVALNLTEASRVFI-IDPWWNPAAEWQSADRC---- 889 Query: 156 QRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETI 203 + G +R + L +++++ ++ K+ + + +N + + + Sbjct: 890 -HRIGQRRPCVITRLCIEDSVESRMVALQEKKANMINGTINKDQGDAL 936 >gi|295663903|ref|XP_002792504.1| DNA excision repair protein (Rad26L) [Paracoccidioides brasiliensis Pb01] gi|226279174|gb|EEH34740.1| DNA excision repair protein (Rad26L) [Paracoccidioides brasiliensis Pb01] Length = 1029 Score = 88.5 bits (218), Expect = 5e-16, Method: Composition-based stats. Identities = 31/138 (22%), Positives = 48/138 (34%), Gaps = 17/138 (12%) Query: 66 ANAAPIIVAYHFNSDLARLQKAFPQGR----------TLDKDPCTIQEWN-EGKIPLLFA 114 N ++V H L LQ F T D + +N + + + Sbjct: 630 GNGDKVLVFSHSVRLLKMLQMLFKHTSYNVSYLDGSMTYDNRAKAVDNFNADPREFVFLI 689 Query: 115 HPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQN 174 + G GLN+ N +V W+ Q R + G R V V+ LI+ Sbjct: 690 STRAGGIGLNIT-SANKVVVVDPNWNPAFDLQA-----QDRAYRIGQSRDVEVFRLISAG 743 Query: 175 TIDELVLQRLRTKSTIQD 192 TI+E+V R K + Sbjct: 744 TIEEIVYARQIYKQQQAN 761 >gi|150864673|ref|XP_001383607.2| DNA dependent ATPase [Scheffersomyces stipitis CBS 6054] gi|149385929|gb|ABN65578.2| DNA dependent ATPase [Scheffersomyces stipitis CBS 6054] Length = 1067 Score = 88.5 bits (218), Expect = 5e-16, Method: Composition-based stats. Identities = 30/172 (17%), Positives = 66/172 (38%), Gaps = 27/172 (15%) Query: 51 VHDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAFPQGRTLD------------- 95 V K++ L+ +++ ++ ++ L L+K R LD Sbjct: 622 VKSGKMQVLKNLLQLWQSQEHKTLLFCQTRQMLDILEKFVANLRLLDIDHEYFTYLRMDG 681 Query: 96 -----KDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIE 149 K + ++N + + + G G+NL G + ++ + W+ Q E Sbjct: 682 STPIAKRQDLVDKFNSDPNLHVFLLTTKVGGLGVNLT-GADRVIIYDPDWNPSTDIQARE 740 Query: 150 RIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 R + G K+ + +Y L+ +I+E + R K+ + + +L K+ Sbjct: 741 RAW-----RLGQKKDITIYRLMTTGSIEEKIYHRQIFKTFLTNKILKDPKQR 787 >gi|294942448|ref|XP_002783529.1| DNA repair protein rad54, putative [Perkinsus marinus ATCC 50983] gi|239896026|gb|EER15325.1| DNA repair protein rad54, putative [Perkinsus marinus ATCC 50983] Length = 682 Score = 88.5 bits (218), Expect = 5e-16, Method: Composition-based stats. Identities = 34/172 (19%), Positives = 63/172 (36%), Gaps = 21/172 (12%) Query: 39 AVYYDEEKHWKEVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQKAFP------- 89 A+ D+ + + + K++ L ++ + N +++ + S L +Q Sbjct: 512 ALPQDDGRKIEALSS-KLQVLHCLLRRLKENGHRVLLFCPWTSMLDLVQYTILRTDGMSC 570 Query: 90 ---QGRTL--DKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEH 144 G T D+ + N K GL L + +V S W+ + Sbjct: 571 LRIDGSTPSSDRQRKIRKFQNSKKYFAFVLSTRCGHVGLTLT-AADRVVLISPSWNPSDD 629 Query: 145 QQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 Q + R + G +R V Y L+ TI+E + QR TK ++L Sbjct: 630 DQAVAR-----AYRIGQRRDVIAYRLVCSGTIEERIFQREVTKIGDSKVILE 676 >gi|153792503|ref|NP_001093563.1| DNA excision repair protein ERCC-6-like [Danio rerio] gi|182645387|sp|A2BGR3|ERC6L_DANRE RecName: Full=DNA excision repair protein ERCC-6-like; AltName: Full=ATP-dependent helicase ERCC6-like gi|122890885|emb|CAM14199.1| novel protein [Danio rerio] gi|122891292|emb|CAM13192.1| novel protein [Danio rerio] Length = 1451 Score = 88.5 bits (218), Expect = 5e-16, Method: Composition-based stats. Identities = 28/160 (17%), Positives = 53/160 (33%), Gaps = 20/160 (12%) Query: 45 EKHWKEVHDEKIKALEVIIE--KANAAPIIVAYHFNSDLA-----------RLQKAFPQG 91 H K++ + ++E + ++ L RL + Sbjct: 466 SDHTLIEESGKLQFVVSLMECLREEGHRTLIFSQSRKMLDIMERVLRNRNFRLLRLDGTV 525 Query: 92 RTLDKDPCTIQEWNEGK-IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 L + I + K + G G+ L G N +V F W+ Q ++R Sbjct: 526 TQLAEREKRISLFQTDKRYTIFLLTTQVGGVGITLT-GANRVVIFDPSWNPATDAQAVDR 584 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 + G V +Y LI T++E + +R K ++ Sbjct: 585 -----AYRIGQTENVIIYRLITCGTVEEKIYRRQVFKDSL 619 >gi|19114529|ref|NP_593617.1| fun thirty related protein Fft3 [Schizosaccharomyces pombe 972h-] gi|46397090|sp|O42861|YFC1_SCHPO RecName: Full=Uncharacterized ATP-dependent helicase C25A8.01c gi|2864632|emb|CAA16951.1| fun thirty related protein Fft3 [Schizosaccharomyces pombe] Length = 922 Score = 88.5 bits (218), Expect = 5e-16, Method: Composition-based stats. Identities = 29/154 (18%), Positives = 62/154 (40%), Gaps = 19/154 (12%) Query: 54 EKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQK----------AFPQGRTLDKDPCTI 101 K++ L+ ++ A N +++ F L LQ F +D I Sbjct: 761 TKVRKLKKLLTNAVENGDRVVLFSQFTQVLDILQLVMKSLNLKFLRFDGSTQVDFRQDLI 820 Query: 102 QEWNEGK-IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 ++ + I + + G G+NL N+++ + + ++ + Q +R + G Sbjct: 821 DQFYADESINVFLLSTKAGGFGINL-ACANMVILYDVSFNPFDDLQAEDR-----AHRVG 874 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 K+ V VY + ++TI+E + + K + L Sbjct: 875 QKKEVTVYKFVVKDTIEEHIQRLANAKIALDATL 908 >gi|223953572|gb|ACN30001.1| chromodomain helicase DNA-binding protein 7 [Vicugna vicugna] Length = 3000 Score = 88.5 bits (218), Expect = 5e-16, Method: Composition-based stats. Identities = 35/233 (15%), Positives = 80/233 (34%), Gaps = 42/233 (18%) Query: 2 KQYHK-FQRE-LYCDLQGENIEAFNSASKTVKCLQLANGA--VYYDEEKHWKEV------ 51 K Y ++ + G N + ++ + N + EEK +E Sbjct: 1212 KYYRAILEKNFTFLSKGGGQANVPNLLNTMMELRKCCNHPYLINGAEEKILEEFKETHNA 1271 Query: 52 --HDEKIKALEV------IIEK------ANAAPIIVAYHFNSDLAR-----LQKAFPQGR 92 D +++A+ +I+K A +++ L +Q+ +P R Sbjct: 1272 DSPDFQLQAMIQAAGKLVLIDKLLPKLKAGGHRVLIFSQMVRCLDILEDYLIQRRYPYER 1331 Query: 93 TLDK-----DPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQ 145 + I +++ + + G G+NL + + F W+ + Sbjct: 1332 IDGRVRGNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLT-AADTCIIFDSDWNPQNDL 1390 Query: 146 QMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNAL 198 Q R + G ++V +Y LI +N+ + + + K + +L ++ Sbjct: 1391 QAQARC-----HRIGQSKSVKIYRLITRNSYEREMFDKASLKLGLDKAVLQSM 1438 >gi|301759851|ref|XP_002915762.1| PREDICTED: chromodomain-helicase-DNA-binding protein 7-like [Ailuropoda melanoleuca] gi|281345480|gb|EFB21064.1| hypothetical protein PANDA_003773 [Ailuropoda melanoleuca] Length = 2995 Score = 88.5 bits (218), Expect = 5e-16, Method: Composition-based stats. Identities = 35/233 (15%), Positives = 80/233 (34%), Gaps = 42/233 (18%) Query: 2 KQYHK-FQRE-LYCDLQGENIEAFNSASKTVKCLQLANGA--VYYDEEKHWKEV------ 51 K Y ++ + G N + ++ + N + EEK +E Sbjct: 1214 KYYRAILEKNFTFLSKGGGQANVPNLLNTMMELRKCCNHPYLINGAEEKILEEFKETHNA 1273 Query: 52 --HDEKIKALEV------IIEK------ANAAPIIVAYHFNSDLAR-----LQKAFPQGR 92 D +++A+ +I+K A +++ L +Q+ +P R Sbjct: 1274 DSPDFQLQAMIQAAGKLVLIDKLLPKLKAGGHRVLIFSQMVRCLDILEDYLIQRRYPYER 1333 Query: 93 TLDK-----DPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQ 145 + I +++ + + G G+NL + + F W+ + Sbjct: 1334 IDGRVRGNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLT-AADTCIIFDSDWNPQNDL 1392 Query: 146 QMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNAL 198 Q R + G ++V +Y LI +N+ + + + K + +L ++ Sbjct: 1393 QAQARC-----HRIGQSKSVKIYRLITRNSYEREMFDKASLKLGLDKAVLQSM 1440 >gi|194214886|ref|XP_001915803.1| PREDICTED: similar to Chromodomain-helicase-DNA-binding protein 7 (ATP-dependent helicase CHD7) (CHD-7) [Equus caballus] Length = 2995 Score = 88.5 bits (218), Expect = 5e-16, Method: Composition-based stats. Identities = 35/233 (15%), Positives = 80/233 (34%), Gaps = 42/233 (18%) Query: 2 KQYHK-FQRE-LYCDLQGENIEAFNSASKTVKCLQLANGA--VYYDEEKHWKEV------ 51 K Y ++ + G N + ++ + N + EEK +E Sbjct: 1215 KYYRAILEKNFTFLSKGGGQANVPNLLNTMMELRKCCNHPYLINGAEEKILEEFKETHNA 1274 Query: 52 --HDEKIKALEV------IIEK------ANAAPIIVAYHFNSDLAR-----LQKAFPQGR 92 D +++A+ +I+K A +++ L +Q+ +P R Sbjct: 1275 DSPDFQLQAMIQAAGKLVLIDKLLPKLKAGGHRVLIFSQMVRCLDILEDYLIQRRYPYER 1334 Query: 93 TLDK-----DPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQ 145 + I +++ + + G G+NL + + F W+ + Sbjct: 1335 IDGRVRGNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLT-AADTCIIFDSDWNPQNDL 1393 Query: 146 QMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNAL 198 Q R + G ++V +Y LI +N+ + + + K + +L ++ Sbjct: 1394 QAQARC-----HRIGQSKSVKIYRLITRNSYEREMFDKASLKLGLDKAVLQSM 1441 >gi|156845664|ref|XP_001645722.1| hypothetical protein Kpol_1043p54 [Vanderwaltozyma polyspora DSM 70294] gi|156116389|gb|EDO17864.1| hypothetical protein Kpol_1043p54 [Vanderwaltozyma polyspora DSM 70294] Length = 1725 Score = 88.5 bits (218), Expect = 5e-16, Method: Composition-based stats. Identities = 28/147 (19%), Positives = 56/147 (38%), Gaps = 18/147 (12%) Query: 65 KANAAPIIVAYHFNSDLARL---------QKAFPQGRTL-DKDPCTIQEWNEG--KIPLL 112 KA +++ + + + + G T D+ + +N+ Sbjct: 1111 KATGHRVLIFFQMTQIMDIMEDFLRHIDVKYLRLDGHTKHDERSELLPMFNDPNSDYFCF 1170 Query: 113 FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIA 172 + G GLNLQ + ++ F W+ + Q R + G K V + LI Sbjct: 1171 ILSTRAGGLGLNLQT-ADTVIIFDTDWNPHQDLQA-----QDRAHRIGQKNEVRILRLIT 1224 Query: 173 QNTIDELVLQRLRTKSTIQDLLLNALK 199 +N+++E +L++ K I ++ A K Sbjct: 1225 ENSVEEAILEKAHKKLDIDGKVIQAGK 1251 >gi|73999130|ref|XP_544097.2| PREDICTED: similar to chromodomain helicase DNA binding protein 7 isoform 1 [Canis familiaris] Length = 2995 Score = 88.5 bits (218), Expect = 5e-16, Method: Composition-based stats. Identities = 35/233 (15%), Positives = 80/233 (34%), Gaps = 42/233 (18%) Query: 2 KQYHK-FQRE-LYCDLQGENIEAFNSASKTVKCLQLANGA--VYYDEEKHWKEV------ 51 K Y ++ + G N + ++ + N + EEK +E Sbjct: 1215 KYYRAILEKNFTFLSKGGGQANVPNLLNTMMELRKCCNHPYLINGAEEKILEEFKETHNA 1274 Query: 52 --HDEKIKALEV------IIEK------ANAAPIIVAYHFNSDLAR-----LQKAFPQGR 92 D +++A+ +I+K A +++ L +Q+ +P R Sbjct: 1275 DSPDFQLQAMIQAAGKLVLIDKLLPKLKAGGHRVLIFSQMVRCLDILEDYLIQRRYPYER 1334 Query: 93 TLDK-----DPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQ 145 + I +++ + + G G+NL + + F W+ + Sbjct: 1335 IDGRVRGNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLT-AADTCIIFDSDWNPQNDL 1393 Query: 146 QMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNAL 198 Q R + G ++V +Y LI +N+ + + + K + +L ++ Sbjct: 1394 QAQARC-----HRIGQSKSVKIYRLITRNSYEREMFDKASLKLGLDKAVLQSM 1441 >gi|255730915|ref|XP_002550382.1| DNA repair protein RAD16 [Candida tropicalis MYA-3404] gi|240132339|gb|EER31897.1| DNA repair protein RAD16 [Candida tropicalis MYA-3404] Length = 855 Score = 88.5 bits (218), Expect = 5e-16, Method: Composition-based stats. Identities = 27/167 (16%), Positives = 60/167 (35%), Gaps = 23/167 (13%) Query: 45 EKHWKEVHDEKIKALEV----IIEKANAAPIIVAYHFNSDLARLQKAFPQGR-------- 92 W+ KI+AL + + IV F S L ++ + Sbjct: 677 GGEWR--SSTKIEALVEELYKLRSDKHTIKSIVFSQFTSMLDLIEWRLKRAGFQTVKLQG 734 Query: 93 --TLDKDPCTIQEW-NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIE 149 T + TI+ + ++ + + G LNL + + WW+ Q ++ Sbjct: 735 SMTPQQRDNTIKHFMENTEVEVFLVSLKAGGVALNLCE-ASQVFLMDPWWNPSVEWQSMD 793 Query: 150 RIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 R+ + G KR + + +++I+ +++ K+ + +N Sbjct: 794 RV-----HRIGQKRPIKITRFCIEDSIESKIIELQEKKANMIHATIN 835 >gi|167379641|ref|XP_001735221.1| chromodomain helicase DNA binding protein [Entamoeba dispar SAW760] gi|165902890|gb|EDR28599.1| chromodomain helicase DNA binding protein, putative [Entamoeba dispar SAW760] Length = 1044 Score = 88.5 bits (218), Expect = 5e-16, Method: Composition-based stats. Identities = 20/121 (16%), Positives = 49/121 (40%), Gaps = 8/121 (6%) Query: 84 LQKAFPQGRTLDKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDL 141 L++ + + + +N + + G G+NL + ++ + W+ Sbjct: 542 LKELWNGAMGREARQRAMDHFNAKDSTDFVFLLSTRAGGLGINLTT-ADTVIIYDSDWNP 600 Query: 142 EEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 + Q R + G ++ V +Y L + TI+E +L + K + L++ ++K+ Sbjct: 601 QNDLQAQARC-----HRIGQEKTVNIYRLATEGTIEEKILLSAKKKLVLDHLIIQTMEKK 655 Query: 202 T 202 Sbjct: 656 G 656 >gi|154275030|ref|XP_001538366.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1] gi|150414806|gb|EDN10168.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1] Length = 1051 Score = 88.5 bits (218), Expect = 5e-16, Method: Composition-based stats. Identities = 42/210 (20%), Positives = 73/210 (34%), Gaps = 26/210 (12%) Query: 4 YHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVII 63 Y R Y Q + + K Q Y K + + +E Sbjct: 835 YTAITRRGYEKFQESQLSKRQGPKQAKKFGQ------YEGPHTKTKALISHLLDTIEESK 888 Query: 64 EKANAAPI--IVAYHFNSDLARLQKAFPQGR-----------TLDKDPCTIQEWNEGK-I 109 + + API IV + S L ++ A TL + I + E + Sbjct: 889 KAPDEAPIKSIVFSSWTSHLDLIEIAMEDNGITTFTRLDGTMTLKQRNAAIDAFREDDNV 948 Query: 110 PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYY 169 +L A + G GLNL G + + ++ Q ++R+ + G R V Sbjct: 949 TILLATLGAGGVGLNLTAGSRVYIM-EPQYNPAAIAQAVDRV-----HRLGQTREVTTIQ 1002 Query: 170 LIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 I +++I+E + + K + D+ LN K Sbjct: 1003 FIMKDSIEEKIAELAMKKQQMADMSLNRGK 1032 >gi|6735309|emb|CAB68136.1| helicase-like protein [Arabidopsis thaliana] Length = 1496 Score = 88.5 bits (218), Expect = 5e-16, Method: Composition-based stats. Identities = 24/160 (15%), Positives = 60/160 (37%), Gaps = 28/160 (17%) Query: 51 VHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAF----------PQGRTLDKDP 98 K++ L++++++ A +++ L L+ T+ Sbjct: 1203 TDSGKLQTLDILLKRLRAGNHRVLLFAQMTKMLNILEDYMNYRKYKYLRLDGSSTIMDRR 1262 Query: 99 CTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 ++++ I + + G G+NL + ++F+ W+ Q ++R Sbjct: 1263 DMVRDFQHRSDIFVFLLSTRAGGLGINLT-AADTVIFYESDWNPTLDLQAMDR-----AH 1316 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + G + T++E +L R K+T+Q L++ Sbjct: 1317 RLGQTKD---------ETVEEKILHRASQKNTVQQLVMTG 1347 >gi|317030844|ref|XP_001392337.2| chromodomain helicase (Chd1) [Aspergillus niger CBS 513.88] Length = 1516 Score = 88.5 bits (218), Expect = 5e-16, Method: Composition-based stats. Identities = 30/151 (19%), Positives = 58/151 (38%), Gaps = 20/151 (13%) Query: 51 VHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQKAFP-QGRTLDK---------DP 98 K+ L+ ++ K + +++ L L +G T + Sbjct: 756 TSSGKMMLLDQLLAKLKRDGHRVLIFSQMVKMLDILGDYMEFRGYTYQRLDGTIPAAARR 815 Query: 99 CTIQEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 I+ +N + G G+NL + +V F W+ + Q + R Sbjct: 816 LAIEHYNAPGSNDFAFILSTRAGGLGINLMT-ADTVVLFDSDWNPQADLQAMAR-----A 869 Query: 157 RQAGFKRAVFVYYLIAQNTIDELVLQRLRTK 187 + G R V VY L++++T++E V++R R K Sbjct: 870 HRIGQTRPVSVYRLVSKDTVEEEVIERARNK 900 >gi|255552930|ref|XP_002517508.1| ATP-dependent helicase, putative [Ricinus communis] gi|223543519|gb|EEF45050.1| ATP-dependent helicase, putative [Ricinus communis] Length = 1138 Score = 88.5 bits (218), Expect = 5e-16, Method: Composition-based stats. Identities = 35/163 (21%), Positives = 71/163 (43%), Gaps = 25/163 (15%) Query: 54 EKIKALEVII--EKANAAPIIVAYHFNSDLARL------QKAFPQGRTL---------DK 96 K K L II +A ++V + L + + + QG+ + + Sbjct: 926 AKTKFLMEIILLSEAMKERVLVFSQYLDPLKLIAMQLESRFHWIQGKEILHMHGKLDMGE 985 Query: 97 DPCTIQEWNEGK--IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 I+++N+ K ++ A +C G+NL G + +V + W+ +Q I R Sbjct: 986 RQSLIKDFNDRKSEAKVMLASTKACSEGINL-VGASRVVLLDVVWNPSVVRQAISR---- 1040 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + G ++ V++Y+LIA T++E R K + +L+ ++ Sbjct: 1041 -AYRLGQEKVVYIYHLIASETLEEDKYCRQAEKERLSELVFDS 1082 >gi|119177366|ref|XP_001240470.1| hypothetical protein CIMG_07633 [Coccidioides immitis RS] Length = 1142 Score = 88.5 bits (218), Expect = 5e-16, Method: Composition-based stats. Identities = 30/162 (18%), Positives = 68/162 (41%), Gaps = 19/162 (11%) Query: 46 KHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFP---------QGRTL 94 K+ + ++ K++ L ++++ N I++ F + L++ G T Sbjct: 931 KNDEWMNSGKVEKLCELLKQYTENGDRILIFSQFTMVMDILEQVLETLEIRFFRLDGTTS 990 Query: 95 DKDPCTIQE--WNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIG 152 +D +I + + + +P+ + G G+NL N ++ F ++ ++ Q Sbjct: 991 VEDRQSILDAFYEQVDVPVFMLSTKAGGAGINL-ACANKVIIFDSSFNPQDDIQA----- 1044 Query: 153 VTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 R + G R V V L+ + TI+E + +TK + + Sbjct: 1045 ENRAHRVGQTREVEVVRLVTKGTIEEQIYALGQTKLALDQRV 1086 >gi|47206539|emb|CAF92235.1| unnamed protein product [Tetraodon nigroviridis] Length = 993 Score = 88.5 bits (218), Expect = 5e-16, Method: Composition-based stats. Identities = 19/136 (13%), Positives = 45/136 (33%), Gaps = 18/136 (13%) Query: 67 NAAPIIVAYHFNSDLARLQ----------KAFPQGRTLDKDPCTIQEWNEG--KIPLLFA 114 +++ L L+ + G T I +N + Sbjct: 644 EGHRVLIFSQMTKMLDLLEDFLEFEGYKYERIDGGITGGLRQEAIDRFNAPGAQQFCFLL 703 Query: 115 HPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQN 174 + G G+NL + ++ + W+ Q +R + G + V +Y + + Sbjct: 704 STRAGGLGINL-ASADTVIIYDSDWNPHNDIQA-----FSRAHRIGQNKKVMIYRFVTRG 757 Query: 175 TIDELVLQRLRTKSTI 190 +++E + Q + K + Sbjct: 758 SVEERITQVAKRKMML 773 >gi|320031638|gb|EFW13598.1| chromatin remodeling complex subunit Chd3 [Coccidioides posadasii str. Silveira] Length = 1534 Score = 88.5 bits (218), Expect = 5e-16, Method: Composition-based stats. Identities = 24/140 (17%), Positives = 50/140 (35%), Gaps = 18/140 (12%) Query: 68 AAPIIVAYHFNSDLARLQKAFPQGRTLD----------KDPCTIQEWNEGKIP--LLFAH 115 +++ F L ++ L + I E+N P + Sbjct: 1025 GHRVLLFSQFLDFLDIIEDFLDGLGVLHLRLDGSLSSLQKQKRIDEFNAPNSPYFVFMLS 1084 Query: 116 PASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNT 175 + G G+NL + ++ ++ + Q + R + G R V V+ L+ + T Sbjct: 1085 TRAGGVGINL-ATADTVIIMDPDFNPHQDIQALSR-----AHRIGQHRKVLVFQLMTKGT 1138 Query: 176 IDELVLQRLRTKSTIQDLLL 195 +E ++Q R K + L+ Sbjct: 1139 AEEKIIQIGRKKMALDQALI 1158 >gi|289679708|ref|ZP_06500598.1| SNF2-related:helicase, C-terminal:SWIM Zn-finger [Pseudomonas syringae pv. syringae FF5] Length = 97 Score = 88.5 bits (218), Expect = 5e-16, Method: Composition-based stats. Identities = 17/70 (24%), Positives = 34/70 (48%), Gaps = 5/70 (7%) Query: 128 GGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTK 187 + ++ + WW+ Q +R + G + VFVY +IA+ T++E + + R K Sbjct: 4 AADTVIHYDPWWNPAAENQATDR-----AYRIGQDKPVFVYKMIARGTVEEKIQRLQREK 58 Query: 188 STIQDLLLNA 197 S + +L+ Sbjct: 59 SALASGVLDG 68 >gi|256081844|ref|XP_002577177.1| transcriptional regulator atrx homolog (X-linked nuclear protein-1) [Schistosoma mansoni] gi|238662474|emb|CAZ33414.1| transcriptional regulator atrx homolog (X-linked nuclear protein-1), putative [Schistosoma mansoni] Length = 1673 Score = 88.5 bits (218), Expect = 5e-16, Method: Composition-based stats. Identities = 39/191 (20%), Positives = 71/191 (37%), Gaps = 39/191 (20%) Query: 41 YYDEEKHWKEVHDEKIKALEVIIEKAN--AAPIIVAYH----------FNSDLARLQKAF 88 Y DE W+ K+ L I+++ + +I+ H F +++ L F Sbjct: 1329 YKDEYD-WQIDVGAKMDVLFNILKRCSDIGDKVIMFSHSLISLDLVERFLAEINHLSAYF 1387 Query: 89 PQ----------------GRTLDKDPCTIQ-EWN---EGKIPLLFAHPASCGHGLNLQYG 128 G +Q +N ++ L + G G+NL Sbjct: 1388 SDIGHNTWIRGLDYERMDGSMNVNVRKDLQTRFNSTSNTRLRLFIISTKAGGLGINL-VS 1446 Query: 129 GNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKS 188 N L+ W+ Q I R + G + V++Y LIA+ TI+E + R TK Sbjct: 1447 ANRLILLDASWNPSHDIQSI-----FRSYRFGQSKPVYIYRLIAKGTIEEKIYDRQVTKQ 1501 Query: 189 TIQDLLLNALK 199 ++ +++ L+ Sbjct: 1502 SLSLRVIDELQ 1512 >gi|84997071|ref|XP_953257.1| SWI/SNF-related chromatin remodelling factor (ISWI homologue) [Theileria annulata strain Ankara] gi|65304253|emb|CAI76632.1| SWI/SNF-related chromatin remodelling factor (ISWI homologue), putative [Theileria annulata] Length = 1972 Score = 88.5 bits (218), Expect = 5e-16, Method: Composition-based stats. Identities = 27/139 (19%), Positives = 52/139 (37%), Gaps = 18/139 (12%) Query: 69 APIIVAYHFNSDLAR-----LQKAFPQGRTLDKDPC-----TIQEWN--EGKIPLLFAHP 116 +++ F L + + + R I+E+N + Sbjct: 998 HKVLIFTQFQLVLDELETYCINRGWKYMRLDGSTNKLIRELDIREFNSSNSNYFVYLIST 1057 Query: 117 ASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTI 176 + G G+NL N +V + W+ Q I+R + G KR V ++ LI++ T+ Sbjct: 1058 RAGGLGINLT-AANHVVLYDEDWNPFIDLQAIDR-----AHRIGQKRNVHIWKLISEWTV 1111 Query: 177 DELVLQRLRTKSTIQDLLL 195 +E + K + L+L Sbjct: 1112 EERMALIREKKLQLDKLIL 1130 >gi|307204540|gb|EFN83220.1| SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1 [Harpegnathos saltator] Length = 847 Score = 88.5 bits (218), Expect = 5e-16, Method: Composition-based stats. Identities = 24/153 (15%), Positives = 61/153 (39%), Gaps = 19/153 (12%) Query: 55 KIKALEVIIEKA--NAAPIIVAYHFNSDLARLQK----------AFPQGRTLDKDPCTIQ 102 K+K L+ ++ + + I++ F L L++ + + I Sbjct: 650 KLKHLDELLPRLKKDGHRILIFSQFTMVLDILEEYLTIRGQTFIRLDGSTPVTERQSLIN 709 Query: 103 EW-NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGF 161 E+ I + + G G+NL +++ + ++ +Q +R + G Sbjct: 710 EYTQNSSIFIFLLSTRAGGLGINLTAADTVIIH-DIDFNPYNDKQAEDRC-----HRVGQ 763 Query: 162 KRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 K+ V + L+++ TI+E + + + K ++ + Sbjct: 764 KKPVTIIRLLSKGTIEESMYEIAQEKLHLEQQI 796 >gi|269128789|ref|YP_003302159.1| SNF2-like protein [Thermomonospora curvata DSM 43183] gi|268313747|gb|ACZ00122.1| SNF2-related protein [Thermomonospora curvata DSM 43183] Length = 746 Score = 88.5 bits (218), Expect = 5e-16, Method: Composition-based stats. Identities = 31/152 (20%), Positives = 63/152 (41%), Gaps = 17/152 (11%) Query: 53 DEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQKAFPQGRT--------LDKDPCTIQ 102 K++ L ++++A N ++V F LA +Q+A + + Sbjct: 557 SAKLQRLCELVKEAEENGHKVVVFSFFRDVLATVQRALGPAALGPLTGSLSAARRQQLVD 616 Query: 103 EWNE-GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGF 161 E+ +L + + G GLNLQ ++++ Q + R + G Sbjct: 617 EFTAHPGHAVLLSQIQAGGVGLNLQ-AASVVIICEPQLKPTLEAQAVAR-----AHRMGQ 670 Query: 162 KRAVFVYYLIAQNTIDELVLQRLRTKSTIQDL 193 R V V+ L+ +++D+ +++ LR KS + D Sbjct: 671 VRKVQVHRLLVADSVDQRIMELLRHKSALFDE 702 >gi|302837269|ref|XP_002950194.1| hypothetical protein VOLCADRAFT_117484 [Volvox carteri f. nagariensis] gi|300264667|gb|EFJ48862.1| hypothetical protein VOLCADRAFT_117484 [Volvox carteri f. nagariensis] Length = 1735 Score = 88.5 bits (218), Expect = 5e-16, Method: Composition-based stats. Identities = 25/146 (17%), Positives = 52/146 (35%), Gaps = 21/146 (14%) Query: 65 KANAAPIIVAYHFNSDLARLQKA---------FPQGRTLDKDPC-TIQEW-NEGK----I 109 +A +++ F L L+ G +D I + EG+ Sbjct: 1489 RAEGRRVLIFSQFVIMLNVLEDYCNAVGFPVERIDGSIQGRDRQRAIDRFCAEGEGSDGA 1548 Query: 110 PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYY 169 + + G G+ L + + + W+ + Q + R + G K+ V VY Sbjct: 1549 FVFLLSTRAGGQGITLT-AADTCIIYDSDWNPQNDLQAMARC-----HRIGQKKEVTVYR 1602 Query: 170 LIAQNTIDELVLQRLRTKSTIQDLLL 195 LI+++T + + K + + +L Sbjct: 1603 LISRDTYEMALFNSASRKYGLDEAIL 1628 >gi|1881825|gb|AAB49515.1| Rhp16 [Schizosaccharomyces pombe] Length = 854 Score = 88.5 bits (218), Expect = 5e-16, Method: Composition-based stats. Identities = 36/160 (22%), Positives = 62/160 (38%), Gaps = 21/160 (13%) Query: 52 HDEKIKALEV----IIEKANAAPIIVAYHFNSDLA----RLQKA------FPQGRTLDKD 97 KI+AL + +K IV F S L RL+KA G T Sbjct: 681 SSTKIEALVEELYLLRKKDRTLKSIVFSQFTSMLDLIHWRLRKAGFNCVKLDGGMTPKAR 740 Query: 98 PCTIQEW-NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 TI+ + N+ I + + G LNL + + WW+ Q ++RI Sbjct: 741 AATIEAFSNDINITIFLVSLKAGGVALNLTE-ASQVFMMDPWWNGAVQWQAMDRI----- 794 Query: 157 RQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + G K + V L +N+I+ +++ K+ + ++ Sbjct: 795 HRIGQKGRIKVITLCIENSIESKIIELQEKKAQMIHATID 834 >gi|6324879|ref|NP_014948.1| Isw2p [Saccharomyces cerevisiae S288c] gi|74676479|sp|Q08773|ISW2_YEAST RecName: Full=ISWI chromatin-remodeling complex ATPase ISW2; AltName: Full=Imitation switch protein 2 gi|1420671|emb|CAA99622.1| unnamed protein product [Saccharomyces cerevisiae] gi|285815176|tpg|DAA11069.1| TPA: Isw2p [Saccharomyces cerevisiae S288c] Length = 1120 Score = 88.5 bits (218), Expect = 5e-16, Method: Composition-based stats. Identities = 41/226 (18%), Positives = 85/226 (37%), Gaps = 43/226 (19%) Query: 6 KFQRELYCDLQGENIEAFNSAS--------KTVKCLQLAN-------------GAVYYDE 44 Q + Y L ++I+A N A +QL G Y + Sbjct: 423 DMQIQWYKSLLEKDIDAVNGAVGKREGKTRLLNIVMQLRKCCNHPYLFEGAEPGPPYTTD 482 Query: 45 EKHWKEVHDEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQ---------KAFPQGRT 93 E + K+ L+ ++++ + +++ + L L+ G T Sbjct: 483 EHLI--FNSGKMIILDKLLKRLKEKGSRVLIFSQMSRLLDILEDYCYFRDFEYCRIDGST 540 Query: 94 LDKDP-CTIQEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 ++ I E+N+ + + + G G+NL + ++ F W+ + Q ++R Sbjct: 541 SHEERIEAIDEYNKPNSEKFVFLLTTRAGGLGINL-VTADTVILFDSDWNPQADLQAMDR 599 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + G K+ V VY + +N I+E V++R K + L++ Sbjct: 600 -----AHRIGQKKQVHVYRFVTENAIEEKVIERAAQKLRLDQLVIQ 640 >gi|62740093|gb|AAH94093.1| LOC733207 protein [Xenopus laevis] Length = 1416 Score = 88.5 bits (218), Expect = 5e-16, Method: Composition-based stats. Identities = 26/153 (16%), Positives = 56/153 (36%), Gaps = 21/153 (13%) Query: 68 AAPIIVAYHFNSDLARLQKAFP---------QGRTLDK-DPCTIQEWN-EGKIPL-LFAH 115 +++ L L + G + + +N EG Sbjct: 801 GNRVLIFSQMVRMLNILAEYLKSRQFPFQRLDGSIKGEIRKQALDHFNAEGSEDFCFLLS 860 Query: 116 PASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNT 175 + G G+NL + +V F W+ + Q R + G K+ V +Y L+ + + Sbjct: 861 TRAGGLGINL-ASADTVVIFDSDWNPQNDLQAQAR-----AHRIGQKKQVNIYRLVTKGS 914 Query: 176 IDELVLQRLRTKSTIQDLL---LNALKKETIHV 205 ++E +++R + K + L+ ++ K +H Sbjct: 915 VEEDIIERAKKKMVLDHLVIQRMDTTGKTVLHT 947 >gi|170579417|ref|XP_001894822.1| SNF2 family N-terminal domain containing protein [Brugia malayi] gi|158598445|gb|EDP36333.1| SNF2 family N-terminal domain containing protein [Brugia malayi] Length = 926 Score = 88.5 bits (218), Expect = 5e-16, Method: Composition-based stats. Identities = 36/211 (17%), Positives = 81/211 (38%), Gaps = 23/211 (10%) Query: 3 QYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYY-DEEKHWKEVHDEKIKALEV 61 +Y K + + + ++ + + + C + + + +EE + ++ L Sbjct: 720 EYRKKKSDHVAE----DLAFLSDFAISQLCSKFTSTQKFILNEEVALESGKLRELDKLLP 775 Query: 62 IIEKANAAPIIVAYHFNSDLARL---------QKAFPQGRTLDKDPCT-IQEWNE-GKIP 110 I+K +++ F S + L Q G T + I E+N + Sbjct: 776 SIKK-KGDKVLIFSQFTSMMDILEVYLRLRDYQYCRLDGSTPVMERQDVINEYNSSPDLF 834 Query: 111 LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYL 170 + + G G+NL +I++ + ++ +Q R + G + VFV L Sbjct: 835 VFLLSTKAGGLGINLTAANHIILH-DIDFNPYNDKQAEGRC-----HRMGQTKEVFVVRL 888 Query: 171 IAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 I+ +T++E +L + K ++ + A E Sbjct: 889 ISADTVEEEMLALAQKKLELEKEVTGASTAE 919 >gi|303312901|ref|XP_003066462.1| SNF2 family N-terminal domain containing protein [Coccidioides posadasii C735 delta SOWgp] gi|240106124|gb|EER24317.1| SNF2 family N-terminal domain containing protein [Coccidioides posadasii C735 delta SOWgp] Length = 1492 Score = 88.5 bits (218), Expect = 5e-16, Method: Composition-based stats. Identities = 24/140 (17%), Positives = 50/140 (35%), Gaps = 18/140 (12%) Query: 68 AAPIIVAYHFNSDLARLQKAFPQGRTLD----------KDPCTIQEWNEGKIP--LLFAH 115 +++ F L ++ L + I E+N P + Sbjct: 983 GHRVLLFSQFLDFLDIIEDFLDGLGVLHLRLDGSLSSLQKQKRIDEFNAPNSPYFVFMLS 1042 Query: 116 PASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNT 175 + G G+NL + ++ ++ + Q + R + G R V V+ L+ + T Sbjct: 1043 TRAGGVGINL-ATADTVIIMDPDFNPHQDIQALSR-----AHRIGQHRKVLVFQLMTKGT 1096 Query: 176 IDELVLQRLRTKSTIQDLLL 195 +E ++Q R K + L+ Sbjct: 1097 AEEKIIQIGRKKMALDQALI 1116 >gi|73946651|ref|XP_533537.2| PREDICTED: similar to SWI/SNF-related matrix-associated actin-dependent regulator of chromatin a2 isoform b isoform 1 [Canis familiaris] Length = 1542 Score = 88.5 bits (218), Expect = 5e-16, Method: Composition-based stats. Identities = 37/217 (17%), Positives = 77/217 (35%), Gaps = 28/217 (12%) Query: 3 QYHKFQRELYCDLQGENIEA-FNSASKTVKCLQLANGAVYYDEEKHWKEV-------HDE 54 Y Q + G + + + +QL + +H + Sbjct: 961 LYRHMQAKGILLTDGSEKDKKVRAKTLMNTIMQLRKICNHPYMFQHIEVNCSNTLYRASG 1020 Query: 55 KIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAF---------PQGRTLDKDPCTI-Q 102 K + L+ I+ +A +++ S + ++ F G T +D + + Sbjct: 1021 KFELLDRILPKLRATNHRVLLFCQMTSLMTIMEDYFAFRNFLYLRLDGTTKSEDRAALLK 1080 Query: 103 EWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 ++NE + + + G GLNLQ + +V F W+ + Q R + G Sbjct: 1081 KFNEPGSQYFIFLLSTRAGGLGLNLQ-AADTVVIFDSDWNPHQDLQA-----QDRAHRIG 1134 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + V V L N+++E +L + K + ++ A Sbjct: 1135 QQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQA 1171 >gi|323508121|emb|CBQ67992.1| related to RAD16-nucleotide excision repair protein [Sporisorium reilianum] Length = 1659 Score = 88.5 bits (218), Expect = 5e-16, Method: Composition-based stats. Identities = 26/151 (17%), Positives = 54/151 (35%), Gaps = 17/151 (11%) Query: 55 KIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFP-----------QGRTLDKDPCTIQE 103 K+ ++ + +V + L R+QK+ + D+ Sbjct: 1474 KLDQSLEALDSYDPVKSVVFSQWTKMLDRIQKSLNLTGIRYTRLDGTMKRPDRTAALEAF 1533 Query: 104 WNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKR 163 + I +L + G GLNL +W+ +E G+ R + G R Sbjct: 1534 RTDPSIEVLLVSLRAGGTGLNL-VSACRAYLMDPYWN-----PAVENQGLDRVHRMGQTR 1587 Query: 164 AVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 V I +++I+E +L+ + K + + + Sbjct: 1588 PVITTKYIMRHSIEENMLRLQKRKMMLAEKV 1618 >gi|297482338|ref|XP_002692716.1| PREDICTED: kismet-like [Bos taurus] gi|296480623|gb|DAA22738.1| kismet-like [Bos taurus] Length = 2935 Score = 88.5 bits (218), Expect = 5e-16, Method: Composition-based stats. Identities = 35/233 (15%), Positives = 80/233 (34%), Gaps = 42/233 (18%) Query: 2 KQYHK-FQREL-YCDLQGENIEAFNSASKTVKCLQLANGA--VYYDEEKHWKEV------ 51 K Y ++ + G N + ++ + N + EEK +E Sbjct: 1161 KYYRAILEKNFAFLSKGGGQANVPNLLNTMMELRKCCNHPYLINGAEEKILEEFKETHNA 1220 Query: 52 --HDEKIKALEV------IIEK------ANAAPIIVAYHFNSDLAR-----LQKAFPQGR 92 D +++A+ +I+K A +++ L +Q+ +P R Sbjct: 1221 DSPDFQLQAMIQAAGKLVLIDKLLPKLKAGGHRVLIFSQMVRCLDILEDYLIQRRYPYER 1280 Query: 93 TLDK-----DPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQ 145 + I +++ + + G G+NL + + F W+ + Sbjct: 1281 IDGRVRGNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLT-AADTCIIFDSDWNPQNDL 1339 Query: 146 QMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNAL 198 Q R + G ++V +Y LI +N+ + + + K + +L ++ Sbjct: 1340 QAQARC-----HRIGQSKSVKIYRLITRNSYEREMFDKASLKLGLDKAVLQSM 1387 >gi|268053983|gb|ACY92478.1| brahma-like protein [Saccoglossus kowalevskii] Length = 881 Score = 88.5 bits (218), Expect = 5e-16, Method: Composition-based stats. Identities = 33/160 (20%), Positives = 61/160 (38%), Gaps = 20/160 (12%) Query: 52 HDEKIKALEVIIEKANA--APIIVAYHFNSDLARLQKAF---------PQGRTL-DKDPC 99 K + L+ I+ K A ++ + + L+ F G T D Sbjct: 312 SSGKFELLDRILPKLKACNHKALLFSQMTTLMTILEDYFAHRGFRYLRLDGTTKSDDRAK 371 Query: 100 TIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 ++ +N P + + G GLNLQ + ++ F W+ + Q R Sbjct: 372 LLEMFNAPGSPYNIFLLSTRAGGLGLNLQ-AADTVIIFDSDWNPHQDLQA-----QDRAH 425 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + G K V V L+ N+++E +L R K + + ++ A Sbjct: 426 RIGQKSEVRVLRLLTVNSVEEKILAAARYKLNVDEKVIQA 465 >gi|194672930|ref|XP_612494.4| PREDICTED: kismet-like [Bos taurus] Length = 2940 Score = 88.5 bits (218), Expect = 5e-16, Method: Composition-based stats. Identities = 35/233 (15%), Positives = 80/233 (34%), Gaps = 42/233 (18%) Query: 2 KQYHK-FQREL-YCDLQGENIEAFNSASKTVKCLQLANGA--VYYDEEKHWKEV------ 51 K Y ++ + G N + ++ + N + EEK +E Sbjct: 1166 KYYRAILEKNFAFLSKGGGQANVPNLLNTMMELRKCCNHPYLINGAEEKILEEFKETHNA 1225 Query: 52 --HDEKIKALEV------IIEK------ANAAPIIVAYHFNSDLAR-----LQKAFPQGR 92 D +++A+ +I+K A +++ L +Q+ +P R Sbjct: 1226 DSPDFQLQAMIQAAGKLVLIDKLLPKLKAGGHRVLIFSQMVRCLDILEDYLIQRRYPYER 1285 Query: 93 TLDK-----DPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQ 145 + I +++ + + G G+NL + + F W+ + Sbjct: 1286 IDGRVRGNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLT-AADTCIIFDSDWNPQNDL 1344 Query: 146 QMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNAL 198 Q R + G ++V +Y LI +N+ + + + K + +L ++ Sbjct: 1345 QAQARC-----HRIGQSKSVKIYRLITRNSYEREMFDKASLKLGLDKAVLQSM 1392 >gi|39977089|ref|XP_369932.1| hypothetical protein MGG_06447 [Magnaporthe oryzae 70-15] gi|145016135|gb|EDK00625.1| hypothetical protein MGG_06447 [Magnaporthe oryzae 70-15] Length = 1592 Score = 88.5 bits (218), Expect = 5e-16, Method: Composition-based stats. Identities = 34/158 (21%), Positives = 63/158 (39%), Gaps = 18/158 (11%) Query: 51 VHDEKIKALEVIIEKAN--AAPIIVAY------HFNSDLARLQKA---FPQGRT-LDKDP 98 H KI L I+++A +++ +F +L ++QK G T + Sbjct: 937 DHSYKITVLTRILDEAKRVGDKVLIFSSRIPVLNFLENLMKMQKRPYSRLDGETKISTRQ 996 Query: 99 CTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQ 158 ++ +N + + G GLN+Q G N +V W QQ I R + Sbjct: 997 ASVANFNANNDEVYLISTNAGGVGLNIQ-GANRVVMMDFQWQPANEQQAIGR-----AYR 1050 Query: 159 AGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 G + V+VY+LI T + + K+ + +++ Sbjct: 1051 IGQTKPVYVYWLIVGGTYEPKLHAAAIFKTQLASRVVD 1088 >gi|67526707|ref|XP_661415.1| hypothetical protein AN3811.2 [Aspergillus nidulans FGSC A4] gi|40740829|gb|EAA60019.1| hypothetical protein AN3811.2 [Aspergillus nidulans FGSC A4] gi|259481632|tpe|CBF75332.1| TPA: DNA excision repair protein (Rad26L), putative (AFU_orthologue; AFUA_2G03750) [Aspergillus nidulans FGSC A4] Length = 1016 Score = 88.5 bits (218), Expect = 5e-16, Method: Composition-based stats. Identities = 31/138 (22%), Positives = 49/138 (35%), Gaps = 17/138 (12%) Query: 66 ANAAPIIVAYHFNSDLARLQKAF----------PQGRTLDKDPCTIQEWN-EGKIPLLFA 114 N ++V H L LQ F T + + E+N + + + Sbjct: 638 GNGDKVLVFSHSVRLLKMLQMLFNHTSYNVSYLDGSMTYETRAKVVDEFNSDPRQFVFLI 697 Query: 115 HPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQN 174 + G GLN+ N +V W+ Q R + G R V V+ LI+ Sbjct: 698 STRAGGVGLNIT-SANKVVIVDPNWNPSHDLQA-----QDRAYRIGQTRNVEVFRLISAG 751 Query: 175 TIDELVLQRLRTKSTIQD 192 TI+E+V R K + Sbjct: 752 TIEEIVYARQIYKQQQAN 769 >gi|327269727|ref|XP_003219644.1| PREDICTED: chromodomain-helicase-DNA-binding protein 7-like [Anolis carolinensis] Length = 3008 Score = 88.5 bits (218), Expect = 6e-16, Method: Composition-based stats. Identities = 35/233 (15%), Positives = 79/233 (33%), Gaps = 42/233 (18%) Query: 2 KQYHK-FQRE-LYCDLQGENIEAFNSASKTVKCLQLANGA--VYYDEEKHWKEV------ 51 K Y ++ + G N + ++ + N + EEK +E Sbjct: 1209 KYYRAILEKNFTFLSKGGGQANVPNLLNTMMELRKCCNHPYLINGAEEKILEEFKETHNP 1268 Query: 52 --HDEKIKALEV------IIEK------ANAAPIIVAYHFNSDLAR-----LQKAFPQGR 92 D +++A+ +I+K A +++ L +Q+ +P R Sbjct: 1269 DSPDFQLQAMIQAAGKLVLIDKLLPKLKAGGHRVLIFSQMVRCLDILEDYLIQRRYPYER 1328 Query: 93 TLDK-----DPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQ 145 + I ++ + + G G+NL + + F W+ + Sbjct: 1329 IDGRVRGNLRQAAIDRFSRPDSDRFVFLLCTRAGGLGINLT-AADTCIIFDSDWNPQNDL 1387 Query: 146 QMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNAL 198 Q R + G ++V +Y LI +N+ + + + K + +L ++ Sbjct: 1388 QAQARC-----HRIGQSKSVKIYRLITRNSYEREMFDKASLKLGLDKAVLQSM 1435 >gi|126321078|ref|XP_001368272.1| PREDICTED: similar to chromodomain helicase DNA binding protein 7 [Monodelphis domestica] Length = 2999 Score = 88.5 bits (218), Expect = 6e-16, Method: Composition-based stats. Identities = 35/233 (15%), Positives = 79/233 (33%), Gaps = 42/233 (18%) Query: 2 KQYHK-FQRE-LYCDLQGENIEAFNSASKTVKCLQLANGA--VYYDEEKHWKEV------ 51 K Y ++ + G N + ++ + N + EEK +E Sbjct: 1216 KYYRAILEKNFTFLSKGGGQANVPNLLNTMMELRKCCNHPYLINGAEEKILEEFKETHNA 1275 Query: 52 --HDEKIKALEV------IIEK------ANAAPIIVAYHFNSDLAR-----LQKAFPQGR 92 D +++A+ +I+K A +++ L +Q+ +P R Sbjct: 1276 DSPDFQLQAMIQAAGKLVLIDKLLPKLKAGGHRVLIFSQMVRCLDILEDYLIQRRYPYER 1335 Query: 93 TLDK-----DPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQ 145 + I ++ + + G G+NL + + F W+ + Sbjct: 1336 IDGRVRGNLRQAAIDRFSRPDSDRFVFLLCTRAGGLGINLT-AADTCIIFDSDWNPQNDL 1394 Query: 146 QMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNAL 198 Q R + G ++V +Y LI +N+ + + + K + +L ++ Sbjct: 1395 QAQARC-----HRIGQSKSVKIYRLITRNSYEREMFDKASLKLGLDKAVLQSM 1442 >gi|260942759|ref|XP_002615678.1| hypothetical protein CLUG_04560 [Clavispora lusitaniae ATCC 42720] gi|238850968|gb|EEQ40432.1| hypothetical protein CLUG_04560 [Clavispora lusitaniae ATCC 42720] Length = 1563 Score = 88.5 bits (218), Expect = 6e-16, Method: Composition-based stats. Identities = 31/144 (21%), Positives = 55/144 (38%), Gaps = 18/144 (12%) Query: 68 AAPIIVAYH------FNSDLARLQK----AFPQGRTLDKDPCTIQEWNEG--KIPLLFAH 115 +++ + D RL+ G D + +NE + Sbjct: 1042 GHRVLLFFQMTQIMDIMEDFLRLRGMKYMRLDGGTKADDRTYLLNLFNEPNSEYFCFLLS 1101 Query: 116 PASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNT 175 + G GLNLQ + ++ F W+ + Q R + G K V + LI +++ Sbjct: 1102 TRAGGLGLNLQT-ADTVIIFDSDWNPHQDLQA-----QDRAHRIGQKNEVRILRLITEDS 1155 Query: 176 IDELVLQRLRTKSTIQDLLLNALK 199 I+E+VL+R K I ++ A K Sbjct: 1156 IEEMVLERAVAKLEIDGKVIQAGK 1179 >gi|323453075|gb|EGB08947.1| hypothetical protein AURANDRAFT_53418 [Aureococcus anophagefferens] Length = 738 Score = 88.5 bits (218), Expect = 6e-16, Method: Composition-based stats. Identities = 29/179 (16%), Positives = 62/179 (34%), Gaps = 23/179 (12%) Query: 36 ANGAVYYDEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQK------- 86 ANG K + LE I+ K A +++ L ++ Sbjct: 477 ANGEFIGVATPKALVNAAGKFRLLERILPKLKAQGHKVLLFSQMTELLNIIEDYLRWREW 536 Query: 87 ---AFPQGRTLDKDPCTIQEWN-----EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLW 138 G L + I +N + + + G G+NL + ++ F Sbjct: 537 NYFRIDGGVELSERQRQIDAFNGEGQESNEYFVFMLSTRAGGLGINL-ATADTVILFDSD 595 Query: 139 WDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 W+ + Q ++R + G KR V VY + + + ++++ +K ++ + + Sbjct: 596 WNPHQDAQAMDR-----AHRIGQKRDVVVYRFLTSGSAEIGMMEKQISKKKLERMAVQG 649 >gi|145238522|ref|XP_001391908.1| DNA excision repair protein (Rad26L) [Aspergillus niger CBS 513.88] gi|134076397|emb|CAK48215.1| unnamed protein product [Aspergillus niger] Length = 1013 Score = 88.5 bits (218), Expect = 6e-16, Method: Composition-based stats. Identities = 31/138 (22%), Positives = 50/138 (36%), Gaps = 17/138 (12%) Query: 66 ANAAPIIVAYHFNSDLARLQKAF----------PQGRTLDKDPCTIQEWN-EGKIPLLFA 114 AN ++V H L LQ F + ++ + ++N + + Sbjct: 635 ANGDKVLVFSHSVRLLKMLQMLFHYTSYNVSYLDGSMSYEERTKVVDDFNSNPRQFVFLI 694 Query: 115 HPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQN 174 S G GLN+ N +V W+ Q R + G R V V+ LI+ Sbjct: 695 STRSGGVGLNIT-SANKVVIVDPNWNPSHDLQA-----QDRAYRIGQSRDVEVFRLISAG 748 Query: 175 TIDELVLQRLRTKSTIQD 192 TI+E+V R K + Sbjct: 749 TIEEIVYARQIYKQQQAN 766 >gi|320581583|gb|EFW95803.1| DNA dependent ATPase [Pichia angusta DL-1] Length = 1003 Score = 88.1 bits (217), Expect = 6e-16, Method: Composition-based stats. Identities = 35/232 (15%), Positives = 73/232 (31%), Gaps = 45/232 (19%) Query: 2 KQYHKFQRELYCDLQGENIEAF-----NSASKTVKCLQLANGAVYYDEEKHWKEVHDE-- 54 K Y F L E+I N+ ++ N D + K Sbjct: 538 KLYEDF-------LNSEDINKILRGKRNALFGIDVLRKICNHPDLVDLKLRKKHQRTAEQ 590 Query: 55 ------KIKALEVIIEK--ANAAPIIVAYHFNSDLARLQK----------------AFPQ 90 K++ + +++ + ++ L LQ Sbjct: 591 LEARAGKLQVVHALLDVWFSEGRKTLIFTQTRQMLDILQDFMEALNYETESKFSFMRMDG 650 Query: 91 GRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIE 149 + + + ++N + G G+NL G + ++ + W+ Q E Sbjct: 651 TTPISQRQSMVDQFNTNPMYNVFLLTTRVGGLGVNLT-GASRVIIYDPDWNPSTDVQARE 709 Query: 150 RIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 R + G K+ V +Y L+ +I+E + R K + + +L K++ Sbjct: 710 RAW-----RLGQKKDVVIYRLMMAGSIEEKIYHRQIFKQLLTNKILKDPKQK 756 >gi|255718303|ref|XP_002555432.1| KLTH0G09196p [Lachancea thermotolerans] gi|238936816|emb|CAR24995.1| KLTH0G09196p [Lachancea thermotolerans] Length = 1308 Score = 88.1 bits (217), Expect = 6e-16, Method: Composition-based stats. Identities = 42/227 (18%), Positives = 78/227 (34%), Gaps = 35/227 (15%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASK--TVKCLQL---ANGAVYYDEEKHWKEVHDE-- 54 + Y + + A K K +QL N +DE + Sbjct: 715 QLYQQMLKHNALFFGAGTEGATKGGIKGLNNKIMQLRKICNHPFVFDEVEGIINPTRGNS 774 Query: 55 --------KIKALEVIIEK--ANAAPIIVAYH------FNSDLAR---LQKAFPQGRTLD 95 K + L+ I+ K A +++ + D R L+ G T Sbjct: 775 PLLYRVAGKFELLDRILPKFKATGHRVLMFFQMTQVMDIMEDFLRMRDLKYLRLDGATKT 834 Query: 96 KDPC-TIQEWNEGKIPLL--FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIG 152 ++ ++ +N + G GLNLQ + ++ F W+ + Q Sbjct: 835 EERTGMLKLFNAPDSEYFCFLLSTRAGGLGLNLQT-ADTVIIFDTDWNPHQDLQA----- 888 Query: 153 VTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 R + G K V + LI ++++E++L+R K I ++ A K Sbjct: 889 QDRAHRIGQKNEVRILRLITTDSVEEVILERALQKLDIDGKVIQAGK 935 >gi|327290056|ref|XP_003229740.1| PREDICTED: DNA excision repair protein ERCC-6-like [Anolis carolinensis] Length = 697 Score = 88.1 bits (217), Expect = 6e-16, Method: Composition-based stats. Identities = 26/152 (17%), Positives = 53/152 (34%), Gaps = 20/152 (13%) Query: 53 DEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQKAFPQGRT-----------LDKDPC 99 K+ L ++EK +V L ++ + L + Sbjct: 428 SGKLVFLVALLEKLQEEGHQTLVFSQSRKMLDIIEHILTKRSFRLMRVDGTVTCLAEREK 487 Query: 100 TIQEWNEGK-IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQ 158 ++++ K + G GL L +++ F W+ Q ++R + Sbjct: 488 RVRQFQMDKSYSVFLLTTQVGGVGLTLTSATRVVI-FDPSWNPATDAQAVDR-----AYR 541 Query: 159 AGFKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 G K V +Y LI T++E + +R K ++ Sbjct: 542 IGQKENVVIYRLITCGTVEEKIYRRQVFKDSL 573 >gi|134076845|emb|CAK45266.1| unnamed protein product [Aspergillus niger] Length = 1504 Score = 88.1 bits (217), Expect = 6e-16, Method: Composition-based stats. Identities = 30/151 (19%), Positives = 58/151 (38%), Gaps = 20/151 (13%) Query: 51 VHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQKAFP-QGRTLDK---------DP 98 K+ L+ ++ K + +++ L L +G T + Sbjct: 744 TSSGKMMLLDQLLAKLKRDGHRVLIFSQMVKMLDILGDYMEFRGYTYQRLDGTIPAAARR 803 Query: 99 CTIQEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 I+ +N + G G+NL + +V F W+ + Q + R Sbjct: 804 LAIEHYNAPGSNDFAFILSTRAGGLGINLMT-ADTVVLFDSDWNPQADLQAMAR-----A 857 Query: 157 RQAGFKRAVFVYYLIAQNTIDELVLQRLRTK 187 + G R V VY L++++T++E V++R R K Sbjct: 858 HRIGQTRPVSVYRLVSKDTVEEEVIERARNK 888 >gi|118496046|dbj|BAF37539.1| DNA repair and recombination protein RAD5B [Neurospora crassa] Length = 950 Score = 88.1 bits (217), Expect = 6e-16, Method: Composition-based stats. Identities = 36/176 (20%), Positives = 65/176 (36%), Gaps = 21/176 (11%) Query: 30 VKCLQLA-NGAVYYDEEKHWKEVHDEKIKALEVIIEKA---NAAPIIVAYHFNSDLARLQ 85 K L+ A + DEE+ E K +A+ +++ + II+ + S L +Q Sbjct: 753 DKLLEPAPEHSATQDEEELESETKSSKTEAVLALVKGTLDKEGSKIIIFSQWTSFLTIIQ 812 Query: 86 KAFPQGR-----------TLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVF 134 + +D + +L A C GLNL + ++ Sbjct: 813 HQLDEAGYTYTRIDGSMNAAQRDAAIRALDYDPNTRILLASLGVCSVGLNL-VSADTVIL 871 Query: 135 FSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 WW Q ++R+ + G R V+ L+ N+I+E VL + K + Sbjct: 872 ADSWWAPAIEDQAVDRV-----HRLGQTRPTTVWRLVMDNSIEERVLDIQKEKREL 922 >gi|332025170|gb|EGI65350.1| ATP-dependent helicase brm [Acromyrmex echinatior] Length = 1953 Score = 88.1 bits (217), Expect = 6e-16, Method: Composition-based stats. Identities = 26/116 (22%), Positives = 49/116 (42%), Gaps = 9/116 (7%) Query: 85 QKAFPQGRTLDKDPCTI-QEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDL 141 G T +D + +++N+ + L + G GLNLQ + ++ F W+ Sbjct: 1499 MYLRLDGTTKAEDRGDLLKKFNDPGSEYFLFLLSTRAGGLGLNLQ-AADTVIIFDSDWNP 1557 Query: 142 EEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + Q R + G K V V L+ N+++E +L R K + + ++ A Sbjct: 1558 HQDLQA-----QDRAHRIGQKNEVRVLRLMTVNSVEERILAAARYKLNMDEKVIQA 1608 >gi|328793843|ref|XP_624270.3| PREDICTED: ATP-dependent helicase brm [Apis mellifera] Length = 2018 Score = 88.1 bits (217), Expect = 6e-16, Method: Composition-based stats. Identities = 26/116 (22%), Positives = 49/116 (42%), Gaps = 9/116 (7%) Query: 85 QKAFPQGRTLDKDPCTI-QEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDL 141 G T +D + +++N+ + L + G GLNLQ + ++ F W+ Sbjct: 1564 MYLRLDGTTKAEDRGDLLKKFNDPGSEYFLFLLSTRAGGLGLNLQ-AADTVIIFDSDWNP 1622 Query: 142 EEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + Q R + G K V V L+ N+++E +L R K + + ++ A Sbjct: 1623 HQDLQA-----QDRAHRIGQKNEVRVLRLMTVNSVEERILAAARYKLNMDEKVIQA 1673 >gi|326917666|ref|XP_003205117.1| PREDICTED: LOW QUALITY PROTEIN: chromodomain-helicase-DNA-binding protein 7-like [Meleagris gallopavo] Length = 3011 Score = 88.1 bits (217), Expect = 6e-16, Method: Composition-based stats. Identities = 35/233 (15%), Positives = 79/233 (33%), Gaps = 42/233 (18%) Query: 2 KQYHK-FQREL-YCDLQGENIEAFNSASKTVKCLQLANGA--VYYDEEKHWKEV------ 51 K Y ++ + G N + ++ + N + EEK +E Sbjct: 1217 KYYRAILEKNFAFLSKGGGQANVPNLLNTMMELRKCCNHPYLINGAEEKILEEFKETHNA 1276 Query: 52 --HDEKIKALEV------IIEK------ANAAPIIVAYHFNSDLAR-----LQKAFPQGR 92 D +++A+ +I+K A +++ L +Q+ +P R Sbjct: 1277 DSPDFQLQAMIQAAGKLVLIDKLLPKLKAGGHRVLIFSQMVRCLDILEDYLIQRRYPYER 1336 Query: 93 TLDK-----DPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQ 145 + I ++ + + G G+NL + + F W+ + Sbjct: 1337 IDGRVRGNLRQAAIDRFSRPDSDRFVFLLCTRAGGLGINLT-AADTCIIFDSDWNPQNDL 1395 Query: 146 QMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNAL 198 Q R + G ++V +Y LI +N+ + + + K + +L ++ Sbjct: 1396 QAQARC-----HRIGQSKSVKIYRLITRNSYEREMFDKASLKLGLDKAVLQSM 1443 >gi|322785850|gb|EFZ12469.1| hypothetical protein SINV_09102 [Solenopsis invicta] Length = 1963 Score = 88.1 bits (217), Expect = 6e-16, Method: Composition-based stats. Identities = 26/116 (22%), Positives = 49/116 (42%), Gaps = 9/116 (7%) Query: 85 QKAFPQGRTLDKDPCTI-QEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDL 141 G T +D + +++N+ + L + G GLNLQ + ++ F W+ Sbjct: 1509 MYLRLDGTTKAEDRGDLLKKFNDPGSEYFLFLLSTRAGGLGLNLQ-AADTVIIFDSDWNP 1567 Query: 142 EEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + Q R + G K V V L+ N+++E +L R K + + ++ A Sbjct: 1568 HQDLQA-----QDRAHRIGQKNEVRVLRLMTVNSVEERILAAARYKLNMDEKVIQA 1618 >gi|307206570|gb|EFN84572.1| TATA-binding protein-associated factor 172 [Harpegnathos saltator] Length = 318 Score = 88.1 bits (217), Expect = 6e-16, Method: Composition-based stats. Identities = 28/142 (19%), Positives = 57/142 (40%), Gaps = 20/142 (14%) Query: 69 APIIVAYHFNSDLARLQK-----AFPQGRTLDKDPC--------TIQEWN-EGKIPLLFA 114 ++ + L ++K P L D + +N + I +L Sbjct: 107 HRALIFCQLKAMLDIVEKDLLRMHLPTVTYLRLDGSIPAAQRHSVVARFNADPSIDVLLL 166 Query: 115 HPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQN 174 G GLNL G + ++F W+ + Q ++R + G K+ V VY LI ++ Sbjct: 167 TTQVGGLGLNLT-GADTVIFVEHDWNPMKDLQAMDR-----AHRIGQKKVVNVYRLITRS 220 Query: 175 TIDELVLQRLRTKSTIQDLLLN 196 T++E ++ + K + +++ Sbjct: 221 TVEEKIMGLQKFKLLTANTVIS 242 >gi|307179542|gb|EFN67856.1| ATP-dependent helicase brm [Camponotus floridanus] Length = 1996 Score = 88.1 bits (217), Expect = 6e-16, Method: Composition-based stats. Identities = 26/116 (22%), Positives = 49/116 (42%), Gaps = 9/116 (7%) Query: 85 QKAFPQGRTLDKDPCTI-QEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDL 141 G T +D + +++N+ + L + G GLNLQ + ++ F W+ Sbjct: 1542 MYLRLDGTTKAEDRGDLLKKFNDPGSEYFLFLLSTRAGGLGLNLQ-AADTVIIFDSDWNP 1600 Query: 142 EEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + Q R + G K V V L+ N+++E +L R K + + ++ A Sbjct: 1601 HQDLQA-----QDRAHRIGQKNEVRVLRLMTVNSVEERILAAARYKLNMDEKVIQA 1651 >gi|121710388|ref|XP_001272810.1| DNA excision repair protein (Rad26L), putative [Aspergillus clavatus NRRL 1] gi|119400960|gb|EAW11384.1| DNA excision repair protein (Rad26L), putative [Aspergillus clavatus NRRL 1] Length = 1011 Score = 88.1 bits (217), Expect = 6e-16, Method: Composition-based stats. Identities = 32/138 (23%), Positives = 51/138 (36%), Gaps = 17/138 (12%) Query: 66 ANAAPIIVAYHFNSDLARLQKAF----------PQGRTLDKDPCTIQEWN-EGKIPLLFA 114 AN ++V H L LQ F + ++ + ++N + K + Sbjct: 631 ANGDKVLVFSHSVRLLKMLQMLFHYTSYNVSYLDGSMSYEERTKVVDDFNSDPKQFVFLI 690 Query: 115 HPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQN 174 S G GLN+ N +V W+ Q R + G R V V+ LI+ Sbjct: 691 STRSGGVGLNIT-SANKVVVVDPNWNPSHDLQA-----QDRAYRIGQSRNVEVFRLISAG 744 Query: 175 TIDELVLQRLRTKSTIQD 192 TI+E+V R K + Sbjct: 745 TIEEIVYARQIYKQQQAN 762 >gi|117606190|ref|NP_001071054.1| chromodomain-helicase-DNA-binding protein 7 [Gallus gallus] gi|123883232|sp|Q06A37|CHD7_CHICK RecName: Full=Chromodomain-helicase-DNA-binding protein 7; Short=CHD-7; AltName: Full=ATP-dependent helicase CHD7 gi|115394059|gb|ABI96999.1| chromodomain helicase DNA-binding protein 7 [Gallus gallus] Length = 3011 Score = 88.1 bits (217), Expect = 6e-16, Method: Composition-based stats. Identities = 35/233 (15%), Positives = 79/233 (33%), Gaps = 42/233 (18%) Query: 2 KQYHK-FQREL-YCDLQGENIEAFNSASKTVKCLQLANGA--VYYDEEKHWKEV------ 51 K Y ++ + G N + ++ + N + EEK +E Sbjct: 1217 KYYRAILEKNFAFLSKGGGQANVPNLLNTMMELRKCCNHPYLINGAEEKILEEFKETHNA 1276 Query: 52 --HDEKIKALEV------IIEK------ANAAPIIVAYHFNSDLAR-----LQKAFPQGR 92 D +++A+ +I+K A +++ L +Q+ +P R Sbjct: 1277 DSPDFQLQAMIQAAGKLVLIDKLLPKLKAGGHRVLIFSQMVRCLDILEDYLIQRRYPYER 1336 Query: 93 TLDK-----DPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQ 145 + I ++ + + G G+NL + + F W+ + Sbjct: 1337 IDGRVRGNLRQAAIDRFSRPDSDRFVFLLCTRAGGLGINLT-AADTCIIFDSDWNPQNDL 1395 Query: 146 QMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNAL 198 Q R + G ++V +Y LI +N+ + + + K + +L ++ Sbjct: 1396 QAQARC-----HRIGQSKSVKIYRLITRNSYEREMFDKASLKLGLDKAVLQSM 1443 >gi|316971517|gb|EFV55276.1| DNA excision repair protein ERCC-6 [Trichinella spiralis] Length = 1202 Score = 88.1 bits (217), Expect = 6e-16, Method: Composition-based stats. Identities = 36/210 (17%), Positives = 72/210 (34%), Gaps = 23/210 (10%) Query: 3 QYHKF-QRELYCDLQGENIEAFNSASKTVKCL---QLANGAVYYDEEKHWKEVHDEKIKA 58 Y ++ E + ++ F + K L + AV + + K+ Sbjct: 371 LYKQYANSEECKAILSGKLDIFLGLAYLRKLCNHPDLVSRAVGENSNEFGYFRRSGKMIV 430 Query: 59 LEVIIE--KANAAPIIVAYHFNSDLARLQKAFPQ----------GRTLDKDPCTIQEWNE 106 L +++ K I++ L L+ + + + +NE Sbjct: 431 LHSLLKLWKQENHRILLFSQSRQMLNILEDFLKKRNYAHLRMDGTTAVGSRQSIVTTFNE 490 Query: 107 -GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 I +L G GL+L G + ++ + W+ Q ER + G V Sbjct: 491 NADIFVLLLTTRVGGLGLDLT-GADRVILYDPDWNPTTDAQAQERAW-----RLGQTSDV 544 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 VY L++ T++E + R K + + +L Sbjct: 545 VVYRLVSSGTVEEKIYHRQIFKQFLMNRVL 574 >gi|296235754|ref|XP_002763033.1| PREDICTED: DNA excision repair protein ERCC-6-like, partial [Callithrix jacchus] Length = 1229 Score = 88.1 bits (217), Expect = 6e-16, Method: Composition-based stats. Identities = 23/138 (16%), Positives = 44/138 (31%), Gaps = 18/138 (13%) Query: 65 KANAAPIIVAYHFNSDLARLQKAFPQ------------GRTLDKDPCTIQEWNEGKIPLL 112 + +V L +++ L+++ + Sbjct: 450 RDEGHQTLVFSQSRQILNIIERLLKNRHFKILRIDGTITHLLEREKRINLFQQNKDYSVF 509 Query: 113 FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIA 172 G GL L +V F W+ Q ++R+ + G K V VY LI Sbjct: 510 LLTTQVGGVGLTLT-AATRVVIFDPSWNPATDAQAVDRV-----YRIGQKENVVVYRLIT 563 Query: 173 QNTIDELVLQRLRTKSTI 190 T++E + +R K ++ Sbjct: 564 CGTVEEKIYRRQVFKDSL 581 >gi|256073356|ref|XP_002572997.1| hypothetical protein [Schistosoma mansoni] gi|238658166|emb|CAZ29229.1| expressed protein [Schistosoma mansoni] Length = 3580 Score = 88.1 bits (217), Expect = 6e-16, Method: Composition-based stats. Identities = 24/145 (16%), Positives = 54/145 (37%), Gaps = 17/145 (11%) Query: 65 KANAAPIIVAYHFNSDLARLQKAFP----QGRTLDKD------PCTIQEWN-EGKIPLLF 113 +A+ +++ L L+ Q +D I ++ + + Sbjct: 1507 RADGHKVLIFSQMIRVLDILEDYLVHQGFQFERIDGRIHGPLRQEAIDRFSIDPDKFVFL 1566 Query: 114 AHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQ 173 + G G+NL ++++ + W+ + Q R + G ++ V VY LI + Sbjct: 1567 LCTKAGGLGINLT-AADVVIIYDSDWNPQNDLQAQARC-----HRIGQQKMVKVYRLITR 1620 Query: 174 NTIDELVLQRLRTKSTIQDLLLNAL 198 NT + + R K + +L ++ Sbjct: 1621 NTYEREMFDRASLKLGLDRAVLQSM 1645 >gi|67522999|ref|XP_659560.1| hypothetical protein AN1956.2 [Aspergillus nidulans FGSC A4] gi|40745965|gb|EAA65121.1| hypothetical protein AN1956.2 [Aspergillus nidulans FGSC A4] gi|259487315|tpe|CBF85892.1| TPA: chromatin remodeling complex subunit (Chd3), putative (AFU_orthologue; AFUA_4G13440) [Aspergillus nidulans FGSC A4] Length = 1443 Score = 88.1 bits (217), Expect = 6e-16, Method: Composition-based stats. Identities = 28/161 (17%), Positives = 63/161 (39%), Gaps = 20/161 (12%) Query: 55 KIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD----------PCTIQ 102 K++ LE+++ +A ++V F +L ++ + I Sbjct: 923 KLQLLELMLPKLQARGHRVLVFSQFLENLDVMEDFLDGLGLPHRRLDGRMTSLEKQRMID 982 Query: 103 EWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 ++N P S G G+NL + ++ ++ + Q + R + G Sbjct: 983 DYNAENSPYFAFLLSTRSGGVGINL-ATADTVIIMDPDFNPHQDMQALSR-----AHRIG 1036 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 K V V+ L+ + + +E ++Q R K + +L++ + E Sbjct: 1037 QKNKVLVFQLMIRGSAEEKIMQIGRKKMVLDHVLIDRMAAE 1077 >gi|297834548|ref|XP_002885156.1| hypothetical protein ARALYDRAFT_318431 [Arabidopsis lyrata subsp. lyrata] gi|297330996|gb|EFH61415.1| hypothetical protein ARALYDRAFT_318431 [Arabidopsis lyrata subsp. lyrata] Length = 630 Score = 88.1 bits (217), Expect = 6e-16, Method: Composition-based stats. Identities = 25/119 (21%), Positives = 44/119 (36%), Gaps = 6/119 (5%) Query: 72 IVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNI 131 ++ + + LQ QG TI + ++ + GLN+ Sbjct: 477 FISSKIKAVIELLQSLAQQGSPDTPPIKTIVFSQWTDVQVMLMSLKAGNLGLNM-VAACH 535 Query: 132 LVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 ++ LWW+ Q I+R + G R V V + +NT++E +L K I Sbjct: 536 VILLDLWWNPTTEDQAIDR-----AHRIGQTRTVTVTRIAIKNTVEERILTLQERKRNI 589 >gi|254432066|ref|ZP_05045769.1| SNF2 family N-terminal domain protein [Cyanobium sp. PCC 7001] gi|197626519|gb|EDY39078.1| SNF2 family N-terminal domain protein [Cyanobium sp. PCC 7001] Length = 1033 Score = 88.1 bits (217), Expect = 6e-16, Method: Composition-based stats. Identities = 23/111 (20%), Positives = 43/111 (38%), Gaps = 9/111 (8%) Query: 88 FPQGRTLDKDPC-TIQEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEH 144 F G T + + + E L + G GLNL + + WW+ Sbjct: 906 FLYGSTSKTERQAMVDRFQEDPRGPQLFLLSLKAGGVGLNLTRASH-VFHIDRWWNPAVE 964 Query: 145 QQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 Q +R + G + V V+ I +++E V + +R KS + + ++ Sbjct: 965 NQATDR-----AYRIGQQNRVMVHKFITSGSVEEKVDRMIREKSKLAEEIV 1010 >gi|324500109|gb|ADY40062.1| Chromodomain-helicase-DNA-binding protein 1 [Ascaris suum] Length = 1095 Score = 88.1 bits (217), Expect = 6e-16, Method: Composition-based stats. Identities = 35/222 (15%), Positives = 84/222 (37%), Gaps = 31/222 (13%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSAS-KTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 + Y + Y +L + N ++ + N A H++E +++ L Sbjct: 745 QYYKWILTKNYKELSKGVKGSINGFVNLIMELKKCCNHASLVRAYDHYEENAQARLQQLM 804 Query: 61 ------VIIEKA------NAAPIIVAYHFNSDLARLQ-----KAFPQGRTLDKDPCTIQE 103 ++++K +++ L +Q + FP R +++ Sbjct: 805 KSSGKLILLDKLLCRLHETGHRVLIFSQMVMMLDIVQEYLQLRRFPSQRLDGSMRADLRK 864 Query: 104 -----WN-EGKIPL-LFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 +N EG + G G+NL + ++ F W+ + Q + R Sbjct: 865 AALDHFNAEGSTDFCFLLSTRAGGLGINL-ATADTVIIFDSDWNPQNDLQAMSR-----A 918 Query: 157 RQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNAL 198 + G K+ V +Y L+ + +++E +++R + K + L++ + Sbjct: 919 HRIGQKKQVNIYRLVTKASVEEEIVERAKRKLVLDHLVIQRM 960 >gi|302405899|ref|XP_003000786.1| ATP-dependent helicase RIS1 [Verticillium albo-atrum VaMs.102] gi|261360743|gb|EEY23171.1| ATP-dependent helicase RIS1 [Verticillium albo-atrum VaMs.102] Length = 1103 Score = 88.1 bits (217), Expect = 6e-16, Method: Composition-based stats. Identities = 30/189 (15%), Positives = 66/189 (34%), Gaps = 30/189 (15%) Query: 45 EKHWKEVHDEKIKALEVII-EKANAAPIIVAYHFNSDLARLQKAFPQGRTL--------- 94 + + + KI+ + I+ ++ + I+ F S + ++ F + Sbjct: 852 GQATQILASAKIRQMMQILHKEVHEHKFIIFSQFTSMMDLIEPFFRKDGLKFTRYDGGMK 911 Query: 95 -DKDPCTIQEW-NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEE--------- 143 D+ ++ N+ K +L GLNL ++ +W+ Sbjct: 912 NDEREASLDRLRNDKKTRILLCSLKCGSLGLNLT-AATRVIIVEPFWNPVRAPSLCSRQN 970 Query: 144 -------HQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTI-QDLLL 195 Q +E + R + V VY LI + T+++ +L K + Q + Sbjct: 971 MAGELLTEWQFVEEQAIDRVHRLTQTIDVIVYRLIVEATVEDRILALQEKKRLLAQTAIE 1030 Query: 196 NALKKETIH 204 +KK+ + Sbjct: 1031 GGMKKDVMK 1039 >gi|170097135|ref|XP_001879787.1| RAD26-like SNF2 family DNA-dependent ATPase [Laccaria bicolor S238N-H82] gi|164645190|gb|EDR09438.1| RAD26-like SNF2 family DNA-dependent ATPase [Laccaria bicolor S238N-H82] Length = 1000 Score = 88.1 bits (217), Expect = 6e-16, Method: Composition-based stats. Identities = 29/126 (23%), Positives = 50/126 (39%), Gaps = 17/126 (13%) Query: 90 QGRTLDKDPC-TIQEW-NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQM 147 G T D I + N+ ++ + + G GLNL G N +V F W+ Q Sbjct: 634 DGSTKQSDRMPMIDRFHNDPEVFIFLISTLAGGTGLNLT-GANKVVIFDPNWNPAHDLQA 692 Query: 148 IERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKS---------TIQDLLLNAL 198 ++R + G R V VY L+ +++EL+ R K ++Q + Sbjct: 693 MDR-----AFRFGQTRDVSVYRLLGAGSVEELIYARQIYKQQQMAIGYEASVQTRYFEGI 747 Query: 199 KKETIH 204 + +T Sbjct: 748 QGDTAK 753 >gi|212535616|ref|XP_002147964.1| SNF2 family helicase, putative [Penicillium marneffei ATCC 18224] gi|210070363|gb|EEA24453.1| SNF2 family helicase, putative [Penicillium marneffei ATCC 18224] Length = 939 Score = 88.1 bits (217), Expect = 6e-16, Method: Composition-based stats. Identities = 36/159 (22%), Positives = 60/159 (37%), Gaps = 20/159 (12%) Query: 52 HDEKIKALEVIIEK---ANAAPIIVAYHFNSDLARLQKAFPQGRTL----------DKDP 98 KIKAL I+ A +V + S L ++ +K Sbjct: 752 PSSKIKALIKILTAKGQAEQTKTVVFSQWTSFLDIIEPHLTANDVRFTRIDGKLNSNKRD 811 Query: 99 CTIQEW-NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 I E+ N+ K +L A C GLNL N ++ WW Q I+R+ Sbjct: 812 QAIAEFSNDPKCKVLLASLNVCSVGLNL-VAANQVILCDSWWAPAIEDQAIDRV-----Y 865 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + G R V+ L+ + ++++ VL+ K + L+ Sbjct: 866 RLGQTRETMVWRLVMEGSVEDNVLKIQAAKRELSSTALS 904 >gi|331222641|ref|XP_003323994.1| Chd3-PA [Puccinia graminis f. sp. tritici CRL 75-36-700-3] gi|309302984|gb|EFP79575.1| Chd3-PA [Puccinia graminis f. sp. tritici CRL 75-36-700-3] Length = 1668 Score = 88.1 bits (217), Expect = 7e-16, Method: Composition-based stats. Identities = 33/204 (16%), Positives = 71/204 (34%), Gaps = 37/204 (18%) Query: 28 KTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEK---------------ANAAPII 72 ++ + YD E V + +++ E ++E A ++ Sbjct: 947 LLMQLRKTLGHPYLYDPEIEPSNVPEAQVQ--ENLVEASAKLIFLRKFIPKLLARGHRML 1004 Query: 73 VAYHFNSDLARLQKAFPQGRTLD-----------KDPCTIQEWN--EGKIPLLFAHPASC 119 + F L + + F G +D I +N + + Sbjct: 1005 IFSQFTMFLD-VMERFLDGENMDYLRLDGNTSQLDRQTRIDHFNRKNSNYNIFLLSTRAG 1063 Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 G G+NL ++++ W+ Q I R + G K+ V V+ L+ + + +E Sbjct: 1064 GAGINL-ATADVVIVLDPDWNPHNDLQAISR-----AHRFGQKKPVSVFKLMVKGSAEEK 1117 Query: 180 VLQRLRTKSTIQDLLLNALKKETI 203 ++Q + K + L++ +E I Sbjct: 1118 IVQTGKRKLVLDHLVIQKASEEEI 1141 >gi|296418213|ref|XP_002838736.1| hypothetical protein [Tuber melanosporum Mel28] gi|295634697|emb|CAZ82927.1| unnamed protein product [Tuber melanosporum] Length = 1100 Score = 88.1 bits (217), Expect = 7e-16, Method: Composition-based stats. Identities = 36/167 (21%), Positives = 67/167 (40%), Gaps = 20/167 (11%) Query: 51 VHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQKAFPQGRT----------LDKDP 98 H K++ L+ I+E + I++ H L L K + + Sbjct: 906 FHSYKMQLLKSIVEHSIRLGDKILIFSHGVYTLNYLDKLLEDWKIDFLRLDGKTRMSTRQ 965 Query: 99 CTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQ 158 + +N G+ + + G GLNL G N ++ F W +Q + R + Sbjct: 966 SATKSFNSGRSDVFLVSTEAGGLGLNL-PGANRIIIFDFKWSPMWEEQAVGR-----AYR 1019 Query: 159 AGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIHV 205 G K+ VFVY A T ++L ++ KS +Q +++ K++ + Sbjct: 1020 MGQKKHVFVYRFHAVGTFEDLKRNKILFKSQLQSRVVD--KQDPLRT 1064 >gi|126330702|ref|XP_001365797.1| PREDICTED: similar to helicase SMARCAD1 [Monodelphis domestica] Length = 1030 Score = 88.1 bits (217), Expect = 7e-16, Method: Composition-based stats. Identities = 31/157 (19%), Positives = 63/157 (40%), Gaps = 19/157 (12%) Query: 51 VHDEKIKALEVIIEKAN--AAPIIVAYHFNSDLARL---------QKAFPQGRT-LDKDP 98 + K K LE I+ + +++ F L L + G+T + + Sbjct: 855 LDSGKFKKLECILSELKEKGDRVVLFSQFTMMLDILEVLLKHHQHRYLRLDGKTQISERI 914 Query: 99 CTIQEWNEG-KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 I ++N I + + G G+NL N+++ + + +Q +R Sbjct: 915 HLIDQFNTDMDIFIFLLSTKAGGLGINLT-SANVVILHDIDCNPYNDKQAEDRC-----H 968 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 + G + V V LI+Q TI+E +L+ + K ++ + Sbjct: 969 RVGQTKEVHVIKLISQGTIEESMLKINQQKLKLEQDM 1005 >gi|126277336|ref|XP_001368949.1| PREDICTED: similar to chromodomain helicase DNA binding protein 8 [Monodelphis domestica] Length = 2591 Score = 88.1 bits (217), Expect = 7e-16, Method: Composition-based stats. Identities = 29/177 (16%), Positives = 62/177 (35%), Gaps = 20/177 (11%) Query: 36 ANGAVYYDEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRT 93 A + +D K+ ++ ++ K A +++ L L+ Q R Sbjct: 1114 ACHIIPHDFHLQAMVRSAGKLVLIDKLLPKLKAGGHKVLIFSQMVRCLDILEDYLIQRRY 1173 Query: 94 L----------DKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDL 141 L + I +++ + + G G+NL + + F W+ Sbjct: 1174 LYERIDGRVRGNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLT-AADTCIIFDSDWNP 1232 Query: 142 EEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNAL 198 + Q R + G +AV VY LI +N+ + + + K + +L ++ Sbjct: 1233 QNDLQAQARC-----HRIGQSKAVKVYRLITRNSYEREMFDKASLKLGLDKAVLQSM 1284 >gi|45199055|ref|NP_986084.1| AFR537Wp [Ashbya gossypii ATCC 10895] gi|44985130|gb|AAS53908.1| AFR537Wp [Ashbya gossypii ATCC 10895] Length = 1025 Score = 88.1 bits (217), Expect = 7e-16, Method: Composition-based stats. Identities = 40/223 (17%), Positives = 80/223 (35%), Gaps = 39/223 (17%) Query: 7 FQRELYCDLQGENIEAFNSAS--------KTVKCLQLAN-------------GAVYYDEE 45 Q + Y L ++I+A N A +QL G Y +E Sbjct: 368 MQLQWYRSLLEKDIDAVNGAVGKREGKTRLLNIVMQLRKCCNHPYLFEGAEPGPPYTTDE 427 Query: 46 KHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQK----------AFPQGRTLD 95 + + +K + +++ + L L+ + + Sbjct: 428 HLIYNSGKMIVLDKLLKRKKKEGSRVLIFSQMSRLLDILEDYCYFRDFEYCRIDGATSHE 487 Query: 96 KDPCTIQEWN--EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGV 153 + I E+N + K + + G G+NL + +V + W+ + Q ++R Sbjct: 488 ERIAAIDEFNAHDSKKFIFLLTTRAGGLGINL-VTADTVVLYDSDWNPQADLQAMDR--- 543 Query: 154 TRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + G K+ V VY L+ +N I+E V++R K + L++ Sbjct: 544 --AHRIGQKKQVHVYRLVTENAIEEKVIERAAQKLRLDQLVIQ 584 >gi|327289025|ref|XP_003229225.1| PREDICTED: chromodomain-helicase-DNA-binding protein 5-like [Anolis carolinensis] Length = 2037 Score = 88.1 bits (217), Expect = 7e-16, Method: Composition-based stats. Identities = 23/160 (14%), Positives = 54/160 (33%), Gaps = 20/160 (12%) Query: 45 EKHWKEVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQ----------KAFPQGR 92 + K+ L+ +++K +++ L L+ + G Sbjct: 1025 DGSSLVKSSGKLMLLQKMLKKLRDGGHRVLIFSQMTKMLDLLEDFLEYEGYKYERIDGGI 1084 Query: 93 TLDKDPCTIQEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 T I +N + + G G+NL + +V + W+ Q Sbjct: 1085 TGGLRQEAIDRFNAPGAQQFCFLLSTRAGGLGINL-ATADTVVIYDSDWNPHNDIQA--- 1140 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 +R + G + V +Y + + +++E + Q + K + Sbjct: 1141 --FSRAHRIGQNKKVMIYRFVTRASVEERITQVAKRKMML 1178 >gi|238504250|ref|XP_002383356.1| chromatin remodeling complex subunit (Chd3), putative [Aspergillus flavus NRRL3357] gi|220690827|gb|EED47176.1| chromatin remodeling complex subunit (Chd3), putative [Aspergillus flavus NRRL3357] Length = 1455 Score = 88.1 bits (217), Expect = 7e-16, Method: Composition-based stats. Identities = 26/161 (16%), Positives = 63/161 (39%), Gaps = 20/161 (12%) Query: 55 KIKALEVIIEKAN--AAPIIVAYHFNSDLARLQKAFPQGRTLD----------KDPCTIQ 102 K++ L++++ K +++ F +L ++ L + I Sbjct: 949 KLQLLQLMLPKLRERGHRVLIFSQFLDNLDIVEDFLDGLGLLHCRLDGRMSSLEKQKMID 1008 Query: 103 EWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 ++N P S G G+NL + ++ ++ + Q + R + G Sbjct: 1009 QYNAQDSPYFAFLLSTRSGGVGINL-ATADTVIIMDPDFNPHQDMQALSR-----AHRIG 1062 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 K V V+ L+ + + +E ++Q + K + +L++ + E Sbjct: 1063 QKNKVLVFQLMTRGSAEEKIMQIGKKKMVLDHVLIDRMVSE 1103 >gi|110777198|ref|XP_624414.2| PREDICTED: chromodomain-helicase-DNA-binding protein Mi-2 homolog [Apis mellifera] Length = 1966 Score = 88.1 bits (217), Expect = 7e-16, Method: Composition-based stats. Identities = 27/182 (14%), Positives = 61/182 (33%), Gaps = 33/182 (18%) Query: 21 EAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSD 80 A N + +T ++ A V + +K L + +++ Sbjct: 1026 TAPNGSYETSALIKAAGKLVLL----------SKMLKKLRD-----DGHRVLIFSQMTKM 1070 Query: 81 LARLQKAFP----QGRTLD------KDPCTIQEWNEG--KIPLLFAHPASCGHGLNLQYG 128 L L+ + +D + I +N + + + G G+NL Sbjct: 1071 LDILEDYLEGEGYKYERIDGNITGAQRQEAIDRFNAPGAQQFVFLLSTRAGGLGINL-AT 1129 Query: 129 GNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKS 188 + ++ + W+ Q +R + G V +Y + +N+++E V Q + K Sbjct: 1130 ADTVIIYDSDWNPHNDIQA-----FSRAHRIGQANKVMIYRFVTRNSVEERVTQVAKRKM 1184 Query: 189 TI 190 + Sbjct: 1185 ML 1186 >gi|73946641|ref|XP_860308.1| PREDICTED: similar to SWI/SNF-related matrix-associated actin-dependent regulator of chromatin a2 isoform b isoform 19 [Canis familiaris] Length = 1550 Score = 88.1 bits (217), Expect = 7e-16, Method: Composition-based stats. Identities = 40/223 (17%), Positives = 78/223 (34%), Gaps = 34/223 (15%) Query: 3 QYHKFQRELYCDLQGENIEAFNSA-SKTVKCLQL---ANGAVYYDEEKHWKEVH------ 52 Y Q + G + A + +QL N + + KE Sbjct: 963 LYRHMQAKGILLTDGSEKDKKGGAKTLMNTIMQLRKICNHPYMFQHIEVMKENPACSNEA 1022 Query: 53 ----DEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAF---------PQGRTLDKD 97 K + L+ I+ +A +++ S + ++ F G T +D Sbjct: 1023 LYRASGKFELLDRILPKLRATNHRVLLFCQMTSLMTIMEDYFAFRNFLYLRLDGTTKSED 1082 Query: 98 PCTI-QEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 + +++NE + + + G GLNLQ + +V F W+ + Q Sbjct: 1083 RAALLKKFNEPGSQYFIFLLSTRAGGLGLNLQ-AADTVVIFDSDWNPHQDLQA-----QD 1136 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 R + G + V V L N+++E +L + K + ++ A Sbjct: 1137 RAHRIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQA 1179 >gi|83764573|dbj|BAE54717.1| unnamed protein product [Aspergillus oryzae] Length = 1455 Score = 88.1 bits (217), Expect = 7e-16, Method: Composition-based stats. Identities = 26/161 (16%), Positives = 63/161 (39%), Gaps = 20/161 (12%) Query: 55 KIKALEVIIEKAN--AAPIIVAYHFNSDLARLQKAFPQGRTLD----------KDPCTIQ 102 K++ L++++ K +++ F +L ++ L + I Sbjct: 949 KLQLLQLMLPKLRERGHRVLIFSQFLDNLDIVEDFLDGLGLLHCRLDGRMSSLEKQKMID 1008 Query: 103 EWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 ++N P S G G+NL + ++ ++ + Q + R + G Sbjct: 1009 QYNAQDSPYFAFLLSTRSGGVGINL-ATADTVIIMDPDFNPHQDMQALSR-----AHRIG 1062 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 K V V+ L+ + + +E ++Q + K + +L++ + E Sbjct: 1063 QKNKVLVFQLMTRGSAEEKIMQIGKKKMVLDHVLIDRMVSE 1103 >gi|327290729|ref|XP_003230074.1| PREDICTED: DNA excision repair protein ERCC-6-like [Anolis carolinensis] Length = 697 Score = 88.1 bits (217), Expect = 7e-16, Method: Composition-based stats. Identities = 26/152 (17%), Positives = 53/152 (34%), Gaps = 20/152 (13%) Query: 53 DEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQKAFPQGRT-----------LDKDPC 99 K+ L ++EK +V L ++ + L + Sbjct: 428 SGKLVFLVALLEKLQEEGHQTLVFSQSRKMLDIIEHILTKRSFRLMRVDGTVTCLAEREK 487 Query: 100 TIQEWNEGK-IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQ 158 ++++ K + G GL L +++ F W+ Q ++R + Sbjct: 488 RVRQFQMDKSYSVFLLTTQVGGVGLTLTSATRVVI-FDPSWNPATDAQAVDR-----AYR 541 Query: 159 AGFKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 G K V +Y LI T++E + +R K ++ Sbjct: 542 IGQKENVVIYRLITCGTVEEKIYRRQVFKDSL 573 >gi|115442660|ref|XP_001218137.1| conserved hypothetical protein [Aspergillus terreus NIH2624] gi|114188006|gb|EAU29706.1| conserved hypothetical protein [Aspergillus terreus NIH2624] Length = 1063 Score = 88.1 bits (217), Expect = 7e-16, Method: Composition-based stats. Identities = 31/138 (22%), Positives = 49/138 (35%), Gaps = 17/138 (12%) Query: 66 ANAAPIIVAYHFNSDLARLQKAF----------PQGRTLDKDPCTIQEWN-EGKIPLLFA 114 AN ++V H L LQ F D + E+N + + + Sbjct: 688 ANGDKVLVFSHSVRLLKMLQMLFHHTSYNVSYLDGSMNYDDRAKAVNEFNADPRQFVFLI 747 Query: 115 HPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQN 174 S G GLN+ ++V W+ Q R + G R V V+ LI+ Sbjct: 748 STRSGGVGLNITSANKVVVM-DPNWNPSYDLQA-----QDRAYRIGQSRDVEVFRLISAG 801 Query: 175 TIDELVLQRLRTKSTIQD 192 T++E+V R K + Sbjct: 802 TVEEIVYARQIYKQQQAN 819 >gi|195144320|ref|XP_002013144.1| GL23550 [Drosophila persimilis] gi|194102087|gb|EDW24130.1| GL23550 [Drosophila persimilis] Length = 1003 Score = 88.1 bits (217), Expect = 7e-16, Method: Composition-based stats. Identities = 34/153 (22%), Positives = 69/153 (45%), Gaps = 19/153 (12%) Query: 56 IKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQG--RTLD--------KDPCTIQEWN 105 I+ L+ I+E +IV + S L +++ + +TLD + ++++N Sbjct: 835 IQKLQSILEGTTDK-VIVVSQWTSFLDIIREYLNEHEWQTLDFNGKMDATEREVVLKDFN 893 Query: 106 --EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKR 163 + +L S G GLNL N L+ L W+ + +Q +RI + G ++ Sbjct: 894 VIQNNKRILLLSLTSGGVGLNLNV-ANHLLLVDLHWNPQLERQAQDRI-----YRYGQQK 947 Query: 164 AVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 F+Y + Q+T+++ + K I +++L Sbjct: 948 PTFIYRFMCQDTVEQRIKALQDYKLEIANVVLQ 980 >gi|159128918|gb|EDP54032.1| DNA excision repair protein (Rad26L), putative [Aspergillus fumigatus A1163] Length = 1008 Score = 88.1 bits (217), Expect = 7e-16, Method: Composition-based stats. Identities = 34/138 (24%), Positives = 51/138 (36%), Gaps = 17/138 (12%) Query: 66 ANAAPIIVAYHFNSDLARLQKAF----------PQGRTLDKDPCTIQEWN-EGKIPLLFA 114 AN ++V H L LQ F T ++ + E+N + K + Sbjct: 633 ANGDKVLVFSHSVRLLKMLQMLFHYTSYNVSYLDGSMTYEERTKVVDEFNSDPKQFVFLI 692 Query: 115 HPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQN 174 S G GLN+ N +V W+ Q R + G R V V+ LI+ Sbjct: 693 STRSGGVGLNIT-SANKVVVVDPNWNPSHDLQA-----QDRAYRIGQSRNVEVFRLISVG 746 Query: 175 TIDELVLQRLRTKSTIQD 192 TI+E+V R K + Sbjct: 747 TIEEIVYARQIYKQQQAN 764 >gi|119482550|ref|XP_001261303.1| DNA excision repair protein Rad16, putative [Neosartorya fischeri NRRL 181] gi|119409458|gb|EAW19406.1| DNA excision repair protein Rad16, putative [Neosartorya fischeri NRRL 181] Length = 977 Score = 88.1 bits (217), Expect = 7e-16, Method: Composition-based stats. Identities = 30/168 (17%), Positives = 57/168 (33%), Gaps = 21/168 (12%) Query: 51 VHDEKIKALE----VIIEKANAAPIIVAYHFNSDLA----RLQKAFPQGRTLDKDPCTIQ 102 KI+ L + + IV F S L RL++A LD Q Sbjct: 801 TSSTKIEMLVYELYKLRSQKQTHKSIVFSQFTSMLQLVEWRLRRAGFNTVMLDGTMTPAQ 860 Query: 103 EW-------NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTR 155 N + + + G LNL + + WW+ Q +R Sbjct: 861 RQKSIDYFMNNVDVEVFLVSLKAGGVALNLTEASRVFI-VDPWWNPAAEWQSADRC---- 915 Query: 156 QRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETI 203 + G +R + L +++++ ++ K+ + + LN + E + Sbjct: 916 -HRIGQRRPCVITRLCIEDSVESRIVLLQEKKANLINGTLNKDQGEAL 962 >gi|255551623|ref|XP_002516857.1| conserved hypothetical protein [Ricinus communis] gi|223543945|gb|EEF45471.1| conserved hypothetical protein [Ricinus communis] Length = 3502 Score = 88.1 bits (217), Expect = 7e-16, Method: Composition-based stats. Identities = 30/157 (19%), Positives = 60/157 (38%), Gaps = 20/157 (12%) Query: 55 KIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKA--FPQGRTL--------DKDPCTIQ 102 K++ L+ I+ K A ++ L +++ + R L ++ I+ Sbjct: 1318 KLEMLDRILPKLKATDHRVLFFSTMTRLLDVMEEYLTMKKYRYLRLDGHTSGNERGALIE 1377 Query: 103 EWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 ++N+ P + + G G+NLQ + ++ F W+ + Q R + G Sbjct: 1378 QFNKSNSPYFIFLLSIRAGGVGVNLQ-AADTVIIFDTDWNPQVDLQAQAR-----AHRIG 1431 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 KR V V T++E V K + + + A Sbjct: 1432 QKRDVLVLRFETVQTVEEQVRASAEHKLGVANQSITA 1468 >gi|224013532|ref|XP_002296430.1| predicted protein [Thalassiosira pseudonana CCMP1335] gi|220968782|gb|EED87126.1| predicted protein [Thalassiosira pseudonana CCMP1335] Length = 119 Score = 88.1 bits (217), Expect = 7e-16, Method: Composition-based stats. Identities = 25/125 (20%), Positives = 50/125 (40%), Gaps = 18/125 (14%) Query: 72 IVAYHFNSDLARLQKAFP---------QGRTLDKDPCT-IQEWNEGK--IPLLFAHPASC 119 +V L ++K F G+T +K + +N+ + + ++ + Sbjct: 1 LVFSQSTKMLDIMEKVFKSDDVSFLRIDGKTAEKSRQQKVDAFNDKESNVDIMLLSTKAA 60 Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 G GL L G + + F W+ Q I+R + G + V VY +I T++E Sbjct: 61 GVGLTL-NGADRAIIFDPSWNPSTDAQAIDRC-----YRIGQLKNVTVYRMICAGTVEEK 114 Query: 180 VLQRL 184 + ++ Sbjct: 115 MYEKQ 119 >gi|34526499|dbj|BAC85127.1| FLJ00266 protein [Homo sapiens] Length = 1544 Score = 88.1 bits (217), Expect = 7e-16, Method: Composition-based stats. Identities = 29/177 (16%), Positives = 62/177 (35%), Gaps = 20/177 (11%) Query: 36 ANGAVYYDEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRT 93 A + +D K+ ++ ++ K A +++ L L+ Q R Sbjct: 78 ACHIIPHDFHLQAMVRSAGKLVLIDKLLPKLKAGGHKVLIFSQMVRCLDILEDYLIQRRY 137 Query: 94 L----------DKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDL 141 L + I +++ + + G G+NL + + F W+ Sbjct: 138 LYERIDGRVRGNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLT-AADTCIIFDSDWNP 196 Query: 142 EEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNAL 198 + Q R + G +AV VY LI +N+ + + + K + +L ++ Sbjct: 197 QNDLQAQARC-----HRIGQSKAVKVYRLITRNSYEREMFDKASLKLGLDKAVLQSM 248 >gi|301613323|ref|XP_002936158.1| PREDICTED: chromodomain-helicase-DNA-binding protein 7, partial [Xenopus (Silurana) tropicalis] Length = 2908 Score = 88.1 bits (217), Expect = 7e-16, Method: Composition-based stats. Identities = 31/209 (14%), Positives = 70/209 (33%), Gaps = 42/209 (20%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEV 61 K +F+ CD ++A A+ K + D+ + L+ Sbjct: 1192 KILEEFRETHNCDPSDFQLQAMTQAA--GKL-----------------VLIDKLLPKLK- 1231 Query: 62 IIEKANAAPIIVAYHFNSDLAR-----LQKAFPQGRTLDK-----DPCTIQEWNEGKIP- 110 A +++ L +Q+ +P R + I +++ Sbjct: 1232 ----AGGHRVLIFSQMVRCLDILEDYLIQRRYPYERIDGRVRGNLRQAAIDRFSKPDSDR 1287 Query: 111 -LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYY 169 + + G G+NL + + F W+ + Q R + G ++V +Y Sbjct: 1288 FVFLLCTRAGGLGINLT-AADTCIIFDSDWNPQNDLQAQARC-----HRIGQSKSVKIYR 1341 Query: 170 LIAQNTIDELVLQRLRTKSTIQDLLLNAL 198 LI +N+ + + + K + +L ++ Sbjct: 1342 LITRNSYEREMFDKASLKLGLDKAVLQSM 1370 >gi|294656285|ref|XP_458541.2| DEHA2D01672p [Debaryomyces hansenii CBS767] gi|199431348|emb|CAG86673.2| DEHA2D01672p [Debaryomyces hansenii] Length = 1041 Score = 88.1 bits (217), Expect = 7e-16, Method: Composition-based stats. Identities = 42/224 (18%), Positives = 83/224 (37%), Gaps = 39/224 (17%) Query: 6 KFQRELYCDLQGENIEAFNSAS--------KTVKCLQL---ANGAVYYD--EEKHWKEVH 52 Q + Y L ++I+A N +QL N +D E Sbjct: 377 DMQIKWYKKLLEKDIDAVNGVVGKREGKTRLLNIVMQLRKCCNHPYLFDGAEPGPPYTTD 436 Query: 53 DE------KIKALEVIIEK--ANAAPIIVAYHFNSDLARLQ---------KAFPQGRTLD 95 + K+ L+ +++K + +++ + L L+ G T Sbjct: 437 EHLVFNAGKMIILDKMLKKFKKEGSRVLIFSQMSRLLDILEDYCYLRDYSYCRIDGSTSH 496 Query: 96 KDP-CTIQEWN--EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIG 152 +D I ++N + + + G G+NL +I++ + W+ + Q ++R Sbjct: 497 EDRIEAIDQYNMPDSDKFIFLLTTRAGGLGINLT-SADIVILYDSDWNPQADLQAMDR-- 553 Query: 153 VTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + G K+ V VY + +N I+E VL R K + L++ Sbjct: 554 ---AHRIGQKKQVKVYRFVTENAIEEKVLDRAAQKLRLDQLVIQ 594 >gi|21622371|emb|CAD37001.1| related to DNA repair protein RAD26 [Neurospora crassa] Length = 1178 Score = 88.1 bits (217), Expect = 7e-16, Method: Composition-based stats. Identities = 29/136 (21%), Positives = 50/136 (36%), Gaps = 17/136 (12%) Query: 68 AAPIIVAYHFNSDLARLQKAF----------PQGRTLDKDPCTIQEWN-EGKIPLLFAHP 116 ++V H L LQ F + ++ + E+N + + + Sbjct: 597 GDKVLVFSHSVRLLRILQHLFHNTSYNVSFLDGALSYEERQRVVDEFNTDPRQFVFLIST 656 Query: 117 ASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTI 176 + G GLN+ N +V F W+ Q R + G R V V+ L++ TI Sbjct: 657 KAGGVGLNIT-SANKVVIFDPHWNPSYDLQA-----QDRAYRIGQIRDVDVFRLVSAGTI 710 Query: 177 DELVLQRLRTKSTIQD 192 +E+V R K + Sbjct: 711 EEIVYARQIYKQQQAN 726 >gi|323338667|gb|EGA79883.1| Rad16p [Saccharomyces cerevisiae Vin13] Length = 611 Score = 88.1 bits (217), Expect = 7e-16, Method: Composition-based stats. Identities = 29/169 (17%), Positives = 60/169 (35%), Gaps = 23/169 (13%) Query: 43 DEEKHWKEVHDEKIKAL-EVIIE-KANAAPI--IVAYHFNSDLARLQKAFPQG------- 91 + W+ KI+AL E + + ++N I IV F S L ++ + Sbjct: 431 NMSGKWQ--SSTKIEALVEELYKLRSNKRTIKSIVFSQFTSMLDLVEWRLKRAGFQTVKL 488 Query: 92 ----RTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQM 147 +D N + + + G LNL + + WW+ Q Sbjct: 489 QGSMSPTQRDETIKYFMNNIQCEVFLVSLKAGGVALNLCEASQVFIL-DPWWNPSVEWQS 547 Query: 148 IERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 +R+ + G R V + +++I+ +++ K+ + +N Sbjct: 548 GDRV-----HRIGQYRPVKITRFCIEDSIEARIIELQEKKANMIHATIN 591 >gi|311258350|ref|XP_003127574.1| PREDICTED: chromodomain-helicase-DNA-binding protein 5-like [Sus scrofa] Length = 1641 Score = 88.1 bits (217), Expect = 7e-16, Method: Composition-based stats. Identities = 22/160 (13%), Positives = 54/160 (33%), Gaps = 20/160 (12%) Query: 45 EKHWKEVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQ----------KAFPQGR 92 + K+ L+ +++K +++ L L+ + G Sbjct: 617 DGSSLVKSSGKLMLLQKMLKKLRDEGHRVLIFSQMTKMLDLLEDFLEYEGYKYERIDGGI 676 Query: 93 TLDKDPCTIQEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 T I +N + + G G+NL + ++ + W+ Q Sbjct: 677 TGGLRQEAIDRFNAPGAQQFCFLLSTRAGGLGINL-ATADTVIIYDSDWNPHNDIQA--- 732 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 +R + G + V +Y + + +++E + Q + K + Sbjct: 733 --FSRAHRIGQNKKVMIYRFVTRASVEERITQVAKRKMML 770 >gi|303316021|ref|XP_003068015.1| SNF2 family N-terminal domain containing protein [Coccidioides posadasii C735 delta SOWgp] gi|240107691|gb|EER25870.1| SNF2 family N-terminal domain containing protein [Coccidioides posadasii C735 delta SOWgp] Length = 1142 Score = 88.1 bits (217), Expect = 7e-16, Method: Composition-based stats. Identities = 30/162 (18%), Positives = 67/162 (41%), Gaps = 19/162 (11%) Query: 46 KHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFP---------QGRTL 94 K+ + ++ K++ L ++++ N I++ F + L++ G T Sbjct: 931 KNDEWMNSGKVEKLCELLKQYTENGDRILIFSQFTMVMDILEQVLETLEIRFFRLDGTTS 990 Query: 95 DKDPCTI--QEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIG 152 +D +I + + +P+ + G G+NL N ++ F ++ ++ Q Sbjct: 991 VEDRQSILDAFYEQVDVPVFMLSTKAGGAGINL-ACANKVIIFDSSFNPQDDIQA----- 1044 Query: 153 VTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 R + G R V V L+ + TI+E + +TK + + Sbjct: 1045 ENRAHRVGQTREVEVVRLVTKGTIEEQIYALGQTKLVLDQRV 1086 >gi|189240851|ref|XP_001812556.1| PREDICTED: similar to chromodomain helicase-DNA-binding protein 3 [Tribolium castaneum] Length = 1966 Score = 88.1 bits (217), Expect = 7e-16, Method: Composition-based stats. Identities = 20/138 (14%), Positives = 46/138 (33%), Gaps = 18/138 (13%) Query: 65 KANAAPIIVAYHFNSDLARLQ----------KAFPQGRTLDKDPCTIQEWNEG--KIPLL 112 + +++ L L+ + T I +N + + Sbjct: 1057 REQGHRVLIFSQMTKMLDILEDFLEGEGYKYERIDGAITGSSRQEAIDRFNAPGAQQFVF 1116 Query: 113 FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIA 172 + G G+NL + ++ + W+ Q +R + G V +Y + Sbjct: 1117 LLSTRAGGLGINL-ATADTVIIYDSDWNPHNDIQA-----FSRAHRIGQANKVMIYRFVT 1170 Query: 173 QNTIDELVLQRLRTKSTI 190 +N+++E V Q + K + Sbjct: 1171 RNSVEERVTQVAKRKMML 1188 >gi|73946629|ref|XP_860094.1| PREDICTED: similar to SWI/SNF-related matrix-associated actin-dependent regulator of chromatin a2 isoform b isoform 13 [Canis familiaris] Length = 1550 Score = 88.1 bits (217), Expect = 7e-16, Method: Composition-based stats. Identities = 38/223 (17%), Positives = 79/223 (35%), Gaps = 34/223 (15%) Query: 3 QYHKFQRELYCDLQGENIEAFNSA-SKTVKCLQLANGAVYYDEEKHWKEVH--------- 52 Y Q + G + A + +QL + +H +++ Sbjct: 963 LYRHMQAKGILLTDGSEKDKKGGAKTLMNTIMQLRKICNHPYMFQHIEDIFCPVHHEKST 1022 Query: 53 ----DEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAF---------PQGRTLDKD 97 K + L+ I+ +A +++ S + ++ F G T +D Sbjct: 1023 LYRASGKFELLDRILPKLRATNHRVLLFCQMTSLMTIMEDYFAFRNFLYLRLDGTTKSED 1082 Query: 98 PCTI-QEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 + +++NE + + + G GLNLQ + +V F W+ + Q Sbjct: 1083 RAALLKKFNEPGSQYFIFLLSTRAGGLGLNLQ-AADTVVIFDSDWNPHQDLQA-----QD 1136 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 R + G + V V L N+++E +L + K + ++ A Sbjct: 1137 RAHRIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQA 1179 >gi|327292821|ref|XP_003231108.1| SNF2 family helicase/ATPase [Trichophyton rubrum CBS 118892] gi|326466738|gb|EGD92191.1| SNF2 family helicase/ATPase [Trichophyton rubrum CBS 118892] Length = 1143 Score = 88.1 bits (217), Expect = 7e-16, Method: Composition-based stats. Identities = 35/163 (21%), Positives = 68/163 (41%), Gaps = 21/163 (12%) Query: 45 EKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFP---------QGRT 93 K W ++ K+ L +++ AN I+V F + L++ G+T Sbjct: 950 NKEW--MNSGKVDKLCELLDNYIANGDRILVFSQFTMVMDILEQVLETQKIKFFRLDGKT 1007 Query: 94 LDKDPCTI-QEWNEG-KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERI 151 +D +I ++E ++P+ + G G+NL N ++ F ++ +E Q Sbjct: 1008 SVEDRQSILDAFHEQVEVPVFMLSTKAGGAGINL-ACANKVIIFDSSFNPQEDIQA---- 1062 Query: 152 GVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 R + G R V V L+ + TI+E + +TK + + Sbjct: 1063 -ENRAHRVGQTREVEVVRLVTRGTIEEQIHALGQTKLALDQRV 1104 >gi|321479460|gb|EFX90416.1| hypothetical protein DAPPUDRAFT_232072 [Daphnia pulex] Length = 2083 Score = 88.1 bits (217), Expect = 7e-16, Method: Composition-based stats. Identities = 27/160 (16%), Positives = 53/160 (33%), Gaps = 20/160 (12%) Query: 45 EKHWKEVHDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQ----------KAFPQGR 92 E K+ L ++ K +++ L L+ + G Sbjct: 1135 ETTALVKASGKLVLLSKMLRVLKEQGHRVLIFSQMTKMLDILEDFLEGEQYKYERIDGGI 1194 Query: 93 TLDKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 T I +N P + + G G+NL + +V + W+ Q Sbjct: 1195 TGTLRQDAIDRFNAPGAPQFVFLLSTRAGGLGINL-ATADTVVIYDSDWNPHNDIQA--- 1250 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 +R + G V +Y + +N+++E V Q + K + Sbjct: 1251 --FSRAHRIGQANKVMIYRFVTRNSVEERVTQVAKKKMML 1288 >gi|290989143|ref|XP_002677202.1| predicted protein [Naegleria gruberi] gi|284090808|gb|EFC44458.1| predicted protein [Naegleria gruberi] Length = 1068 Score = 88.1 bits (217), Expect = 7e-16, Method: Composition-based stats. Identities = 31/189 (16%), Positives = 69/189 (36%), Gaps = 23/189 (12%) Query: 13 CDLQGENIEAFNSASKTVKCLQLANGAV---YYDEEKHWKEVHDEKIKALEVIIEKA--N 67 L +++ + K Q + +E K + ++ ++EK+ + Sbjct: 719 MTLDMSDLDEKRQRALQRKLRQAQEEMIKKRIREEPIENILAKSTKAQMIKQLVEKSIDD 778 Query: 68 AAPIIVAYHFNSDLARL---------QKAFPQGRT--LDKDPCTIQEWNEGK-IPLLFAH 115 +++ + L + + G + + +N+ K I Sbjct: 779 GHKVLIFSQYTRMLDIIGVILKSMNIKYNRIDGSVTKYQERLSLVDSFNQKKNIKCFLLS 838 Query: 116 PASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNT 175 + G GLNL + ++ ++ +Q I+R + G ++ V VY LI +T Sbjct: 839 SQAGGVGLNLT-AASRVIIVEPNFNPSIDEQAIDR-----AYRIGQRQNVIVYRLICSST 892 Query: 176 IDELVLQRL 184 I+E + +RL Sbjct: 893 IEEYIYKRL 901 >gi|255726894|ref|XP_002548373.1| conserved hypothetical protein [Candida tropicalis MYA-3404] gi|240134297|gb|EER33852.1| conserved hypothetical protein [Candida tropicalis MYA-3404] Length = 1043 Score = 88.1 bits (217), Expect = 7e-16, Method: Composition-based stats. Identities = 30/195 (15%), Positives = 71/195 (36%), Gaps = 31/195 (15%) Query: 32 CLQLANGA--VYYD--EEKHWKEVHDE--KIKALEVIIE--KANAAPIIVAYHFNSDLAR 83 ++ N VY D +K K++ L+ +++ ++ ++ L Sbjct: 596 LRKICNHPDLVYRDAMMKKKSYGDPSRSGKMQVLKNLLQIWQSEDHKTLLFCQTRQMLDI 655 Query: 84 LQK----------------AFPQGRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQ 126 L+K + + + ++N + + + G G+NL Sbjct: 656 LEKFVANLPLLNGGEFNYLRMDGSTPISRRQMLVDKFNRDPNMHVFLLTTKVGGLGVNLT 715 Query: 127 YGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRT 186 G + ++ + W+ Q ER + G K+ + +Y L+ +I+E + R Sbjct: 716 -GADRVIIYDPDWNPSTDIQARERAW-----RLGQKKDITIYRLMTTGSIEEKIYHRQIF 769 Query: 187 KSTIQDLLLNALKKE 201 K+ + + +L K+ Sbjct: 770 KTFLTNKILKDPKQR 784 >gi|70989315|ref|XP_749507.1| DNA excision repair protein (Rad26L) [Aspergillus fumigatus Af293] gi|66847138|gb|EAL87469.1| DNA excision repair protein (Rad26L), putative [Aspergillus fumigatus Af293] Length = 1008 Score = 88.1 bits (217), Expect = 7e-16, Method: Composition-based stats. Identities = 34/138 (24%), Positives = 51/138 (36%), Gaps = 17/138 (12%) Query: 66 ANAAPIIVAYHFNSDLARLQKAF----------PQGRTLDKDPCTIQEWN-EGKIPLLFA 114 AN ++V H L LQ F T ++ + E+N + K + Sbjct: 633 ANGDKVLVFSHSVRLLKMLQMLFHYTSYNVSYLDGSMTYEERTKVVDEFNSDPKQFVFLI 692 Query: 115 HPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQN 174 S G GLN+ N +V W+ Q R + G R V V+ LI+ Sbjct: 693 STRSGGVGLNIT-SANKVVVVDPNWNPSHDLQA-----QDRAYRIGQSRNVEVFRLISVG 746 Query: 175 TIDELVLQRLRTKSTIQD 192 TI+E+V R K + Sbjct: 747 TIEEIVYARQIYKQQQAN 764 >gi|301784895|ref|XP_002927862.1| PREDICTED: chromodomain-helicase-DNA-binding protein 8-like [Ailuropoda melanoleuca] Length = 2583 Score = 88.1 bits (217), Expect = 7e-16, Method: Composition-based stats. Identities = 29/177 (16%), Positives = 62/177 (35%), Gaps = 20/177 (11%) Query: 36 ANGAVYYDEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRT 93 A + +D K+ ++ ++ K A +++ L L+ Q R Sbjct: 1115 ACHIIPHDFHLQAMVRSAGKLVLIDKLLPKLKAGGHKVLIFSQMVRCLDILEDYLIQRRY 1174 Query: 94 L----------DKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDL 141 L + I +++ + + G G+NL + + F W+ Sbjct: 1175 LYERIDGRVRGNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLT-AADTCIIFDSDWNP 1233 Query: 142 EEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNAL 198 + Q R + G +AV VY LI +N+ + + + K + +L ++ Sbjct: 1234 QNDLQAQARC-----HRIGQSKAVKVYRLITRNSYEREMFDKASLKLGLDKAVLQSM 1285 >gi|282165704|ref|NP_001164100.1| chromodomain-helicase-DNA-binding protein 8 isoform 1 [Homo sapiens] gi|317373586|sp|Q9HCK8|CHD8_HUMAN RecName: Full=Chromodomain-helicase-DNA-binding protein 8; Short=CHD-8; AltName: Full=ATP-dependent helicase CHD8; AltName: Full=Helicase with SNF2 domain 1 Length = 2581 Score = 88.1 bits (217), Expect = 7e-16, Method: Composition-based stats. Identities = 29/177 (16%), Positives = 62/177 (35%), Gaps = 20/177 (11%) Query: 36 ANGAVYYDEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRT 93 A + +D K+ ++ ++ K A +++ L L+ Q R Sbjct: 1115 ACHIIPHDFHLQAMVRSAGKLVLIDKLLPKLKAGGHKVLIFSQMVRCLDILEDYLIQRRY 1174 Query: 94 L----------DKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDL 141 L + I +++ + + G G+NL + + F W+ Sbjct: 1175 LYERIDGRVRGNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLT-AADTCIIFDSDWNP 1233 Query: 142 EEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNAL 198 + Q R + G +AV VY LI +N+ + + + K + +L ++ Sbjct: 1234 QNDLQAQARC-----HRIGQSKAVKVYRLITRNSYEREMFDKASLKLGLDKAVLQSM 1285 >gi|156545320|ref|XP_001605650.1| PREDICTED: similar to chromodomain helicase DNA binding protein [Nasonia vitripennis] Length = 1997 Score = 88.1 bits (217), Expect = 7e-16, Method: Composition-based stats. Identities = 20/138 (14%), Positives = 49/138 (35%), Gaps = 18/138 (13%) Query: 65 KANAAPIIVAYHFNSDLARLQKAFP----QGRTLD------KDPCTIQEWNEG--KIPLL 112 + + +++ L L+ + +D + I +N + + Sbjct: 1044 RDDGHRVLIFSQMTKMLDLLEDYLEGEGYKYERIDGNITGTQRQEAIDRFNAPGAQQFVF 1103 Query: 113 FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIA 172 + G G+NL + ++ + W+ Q +R + G V +Y + Sbjct: 1104 LLSTRAGGLGINL-ATADTVIIYDSDWNPHNDIQA-----FSRAHRIGQANKVMIYRFVT 1157 Query: 173 QNTIDELVLQRLRTKSTI 190 +N+++E V Q + K + Sbjct: 1158 RNSVEERVTQVAKRKMML 1175 >gi|154309786|ref|XP_001554226.1| hypothetical protein BC1G_07363 [Botryotinia fuckeliana B05.10] gi|150851824|gb|EDN27017.1| hypothetical protein BC1G_07363 [Botryotinia fuckeliana B05.10] Length = 2080 Score = 88.1 bits (217), Expect = 7e-16, Method: Composition-based stats. Identities = 34/156 (21%), Positives = 67/156 (42%), Gaps = 18/156 (11%) Query: 53 DEKIKALEVIIEKAN--AAPIIVAYH--FNSDLARL-------QKAFPQGRT-LDKDPCT 100 K++ L I++ + ++V D + + A G+T ++K Sbjct: 1461 SNKVRILCQILDASRAVGDKVLVFSQTLVTLDFLEIMCRDQGRKYARLDGKTAMNKRQAL 1520 Query: 101 IQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 ++++N + L + G GLNL YG N +V F ++ +Q I R + G Sbjct: 1521 VKDFNSNDLELYLISTTAGGLGLNL-YGANRVVIFDFKYNPINEEQAIGR-----AYRIG 1574 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 K+ VFVY L+A T + + + K+ + +++ Sbjct: 1575 QKKHVFVYRLMAAGTFEGSIQNKAVFKTQLASRVVD 1610 >gi|270013510|gb|EFA09958.1| hypothetical protein TcasGA2_TC012115 [Tribolium castaneum] Length = 1969 Score = 88.1 bits (217), Expect = 7e-16, Method: Composition-based stats. Identities = 20/138 (14%), Positives = 46/138 (33%), Gaps = 18/138 (13%) Query: 65 KANAAPIIVAYHFNSDLARLQ----------KAFPQGRTLDKDPCTIQEWNEG--KIPLL 112 + +++ L L+ + T I +N + + Sbjct: 1060 REQGHRVLIFSQMTKMLDILEDFLEGEGYKYERIDGAITGSSRQEAIDRFNAPGAQQFVF 1119 Query: 113 FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIA 172 + G G+NL + ++ + W+ Q +R + G V +Y + Sbjct: 1120 LLSTRAGGLGINL-ATADTVIIYDSDWNPHNDIQA-----FSRAHRIGQANKVMIYRFVT 1173 Query: 173 QNTIDELVLQRLRTKSTI 190 +N+++E V Q + K + Sbjct: 1174 RNSVEERVTQVAKRKMML 1191 >gi|158293462|ref|XP_314800.4| AGAP008698-PA [Anopheles gambiae str. PEST] gi|157016718|gb|EAA10171.4| AGAP008698-PA [Anopheles gambiae str. PEST] Length = 2083 Score = 88.1 bits (217), Expect = 7e-16, Method: Composition-based stats. Identities = 25/160 (15%), Positives = 60/160 (37%), Gaps = 20/160 (12%) Query: 53 DEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQKAFPQ---------GRTLDK-DPCT 100 K+ L+ ++ + +++ L L + + G + Sbjct: 913 SGKLVLLDKLLCRLKETGHRVLIFSQMVRMLDILAEYLQKRHFSFQRLDGSIKGELRKQA 972 Query: 101 IQEWN-EGKIPL-LFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQ 158 + +N EG + G G+NL + ++ F W+ + Q R + Sbjct: 973 LDHFNAEGSTDFCFLLSTRAGGLGINL-ATADTVIIFDSDWNPQNDLQAQAR-----AHR 1026 Query: 159 AGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNAL 198 G K V +Y L+ ++++E +++R + K + L++ + Sbjct: 1027 IGQKNQVNIYRLVTAHSVEENIVERAKQKMVLDHLVIQRM 1066 >gi|326669481|ref|XP_001922536.3| PREDICTED: chromodomain-helicase-DNA-binding protein 9-like [Danio rerio] Length = 2485 Score = 88.1 bits (217), Expect = 7e-16, Method: Composition-based stats. Identities = 27/146 (18%), Positives = 52/146 (35%), Gaps = 18/146 (12%) Query: 65 KANAAPIIVAYHFNSDLARLQKAFPQGRTL----------DKDPCTIQEWNEGKIP--LL 112 KA +++ L L+ Q R L + I +++ + Sbjct: 792 KAGGHKVLIFSQMVRCLDILEDYLIQRRYLYERIDGRVRGNLRQAAIDRFSKPDSDRFVF 851 Query: 113 FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIA 172 + G G+NL + + F W+ + Q R + G +AV VY LI Sbjct: 852 LLCTRAGGLGINLT-AADTCIIFDSDWNPQNDLQAQARC-----HRIGQNKAVKVYRLIT 905 Query: 173 QNTIDELVLQRLRTKSTIQDLLLNAL 198 +N+ + + R K + +L ++ Sbjct: 906 RNSYEREMFDRASLKLGLDKAVLQSM 931 >gi|242047292|ref|XP_002461392.1| hypothetical protein SORBIDRAFT_02g001960 [Sorghum bicolor] gi|241924769|gb|EER97913.1| hypothetical protein SORBIDRAFT_02g001960 [Sorghum bicolor] Length = 778 Score = 88.1 bits (217), Expect = 7e-16, Method: Composition-based stats. Identities = 22/158 (13%), Positives = 58/158 (36%), Gaps = 23/158 (14%) Query: 50 EVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQK----------AFPQGRTLDKDPC 99 ++ D + L ++V + L ++ L++ Sbjct: 541 QLFDRLLNYLIE-----QKHKVLVFSQWTKVLDIIEYYLDSKGHDVCRIDGSVKLEERRR 595 Query: 100 TIQEWN--EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 I E+N + + + G G+NL + + + W+ + Q ++R Sbjct: 596 QIAEFNDLNSSMRIFLLSTRAGGLGINLT-SADTCILYDSDWNPQMDLQAMDRC-----H 649 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 + G R V VY L ++++ ++++ K ++ +++ Sbjct: 650 RIGQTRPVHVYRLATSHSVEGRIIKKAFGKLKLEHVVI 687 >gi|325119107|emb|CBZ54659.1| putative SNF2 family N-terminal domain containing protein [Neospora caninum Liverpool] Length = 2550 Score = 88.1 bits (217), Expect = 7e-16, Method: Composition-based stats. Identities = 31/154 (20%), Positives = 59/154 (38%), Gaps = 20/154 (12%) Query: 57 KALEVIIEKANAA--PIIVAYHFNSDLARLQ-----KAFPQGRTLDKDPC-----TIQEW 104 E +I++ ++V F L L+ + + R I+++ Sbjct: 1222 DKQEFVIDRTQPKAQRLLVFTQFQLVLDELEAYCHYRGWKYLRLDGSTNKFVRELDIRDF 1281 Query: 105 NEGK--IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFK 162 N + + G G+NL N +V + W+ Q I+R + G + Sbjct: 1282 NSENSTYFVYLISTRAGGLGINLT-AANHVVLYDHDWNPFIDLQAIDR-----AHRIGQQ 1335 Query: 163 RAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 RAV V+ L+ + T++E + R K + LL+ Sbjct: 1336 RAVHVWSLVNEWTVEERMAFRREQKLRLDKLLVQ 1369 >gi|297694660|ref|XP_002824590.1| PREDICTED: chromodomain-helicase-DNA-binding protein 8-like isoform 1 [Pongo abelii] Length = 2581 Score = 88.1 bits (217), Expect = 7e-16, Method: Composition-based stats. Identities = 29/177 (16%), Positives = 62/177 (35%), Gaps = 20/177 (11%) Query: 36 ANGAVYYDEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRT 93 A + +D K+ ++ ++ K A +++ L L+ Q R Sbjct: 1115 ACHIIPHDFHLQAMVRSAGKLVLIDKLLPKLKAGGHKVLIFSQMVRCLDILEDYLIQRRY 1174 Query: 94 L----------DKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDL 141 L + I +++ + + G G+NL + + F W+ Sbjct: 1175 LYERIDGRVRGNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLT-AADTCIIFDSDWNP 1233 Query: 142 EEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNAL 198 + Q R + G +AV VY LI +N+ + + + K + +L ++ Sbjct: 1234 QNDLQAQARC-----HRIGQSKAVKVYRLITRNSYEREMFDKASLKLGLDKAVLQSM 1285 >gi|115634727|ref|XP_787293.2| PREDICTED: similar to MGC81081 protein [Strongylocentrotus purpuratus] gi|115924449|ref|XP_001196643.1| PREDICTED: similar to MGC81081 protein [Strongylocentrotus purpuratus] Length = 600 Score = 88.1 bits (217), Expect = 7e-16, Method: Composition-based stats. Identities = 38/245 (15%), Positives = 77/245 (31%), Gaps = 62/245 (25%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANG----------------AVYYDEE 45 K Y +F N ++ Q + D Sbjct: 369 KIYDQF-----LQQSRSTSNKTNILVILLRLRQCCCHLSLLKELPDQESCEMDGIELDLV 423 Query: 46 KHWKEVH------------DEKIKALEVIIEKAN--------AAPIIVAYHFNSDLARLQ 85 + KE+ KIK + ++EK ++V + L ++ Sbjct: 424 RQMKEMGLGDMTLYPPSFLSTKIKFVINLLEKIRAAGPADRPEKSVLV-SQWTGMLDVVE 482 Query: 86 KAFPQGRTL----------DKDPCTIQEWN---EGKIPLLFAHPASCGHGLNLQYGGNIL 132 + ++ ++++N G+ ++ + G LNL GGN L Sbjct: 483 HHLKEAGFKCWSIDGDVSPNERDEALKDFNYNPRGR-QIMLVSLRTGGATLNL-SGGNHL 540 Query: 133 VFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQD 192 F + W+ Q +RI + G R V ++ I +TI+ + + + K + + Sbjct: 541 FFLDMHWNPALEDQACDRI-----YRIGQTRKVHIHKFICSDTIEYRISELQKKKKKLAN 595 Query: 193 LLLNA 197 +L Sbjct: 596 DVLTG 600 >gi|311261060|ref|XP_001928941.2| PREDICTED: chromodomain-helicase-DNA-binding protein 8 [Sus scrofa] gi|311261079|ref|XP_001929167.2| PREDICTED: chromodomain-helicase-DNA-binding protein 8 [Sus scrofa] Length = 2583 Score = 88.1 bits (217), Expect = 7e-16, Method: Composition-based stats. Identities = 29/177 (16%), Positives = 62/177 (35%), Gaps = 20/177 (11%) Query: 36 ANGAVYYDEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRT 93 A + +D K+ ++ ++ K A +++ L L+ Q R Sbjct: 1115 ACHIIPHDFHLQAMVRSAGKLVLIDKLLPKLKAGGHKVLIFSQMVRCLDILEDYLIQRRY 1174 Query: 94 L----------DKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDL 141 L + I +++ + + G G+NL + + F W+ Sbjct: 1175 LYERIDGRVRGNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLT-AADTCIIFDSDWNP 1233 Query: 142 EEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNAL 198 + Q R + G +AV VY LI +N+ + + + K + +L ++ Sbjct: 1234 QNDLQAQARC-----HRIGQSKAVKVYRLITRNSYEREMFDKASLKLGLDKAVLQSM 1285 >gi|255720466|ref|XP_002556513.1| KLTH0H15158p [Lachancea thermotolerans] gi|238942479|emb|CAR30651.1| KLTH0H15158p [Lachancea thermotolerans] Length = 1021 Score = 88.1 bits (217), Expect = 7e-16, Method: Composition-based stats. Identities = 40/226 (17%), Positives = 85/226 (37%), Gaps = 43/226 (19%) Query: 6 KFQRELYCDLQGENIEAFNSAS--------KTVKCLQLAN-------------GAVYYDE 44 Q + Y L ++++A N A +QL G Y + Sbjct: 368 DMQVQWYKSLLEKDLDAVNGAIGKREGNTRLLNIVMQLRKCCNHPYLFEGAEPGPPYTTD 427 Query: 45 EKHWKEVHDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQ---------KAFPQGRT 93 E + K+ L+ +++ + + +++ + L L+ G T Sbjct: 428 EHLI--FNAGKMIVLDKLLKKKREAGSRVLIFSQMSRLLDILEDYCFFREYSYCRIDGST 485 Query: 94 LDKDPCT-IQEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 ++ I ++NE + + G G+NL + +V + W+ + Q ++R Sbjct: 486 SHEERIDAIDQFNEPNSDKFIFLLTTRAGGLGINL-VTADTVVLYDSDWNPQADLQAMDR 544 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + G K+ V+VY + +N I+E V++R K + L++ Sbjct: 545 -----AHRIGQKKQVYVYRFVTENAIEEKVIERAAQKLRLDQLVIQ 585 >gi|73946643|ref|XP_860337.1| PREDICTED: similar to SWI/SNF-related matrix-associated actin-dependent regulator of chromatin a2 isoform b isoform 20 [Canis familiaris] Length = 1550 Score = 88.1 bits (217), Expect = 7e-16, Method: Composition-based stats. Identities = 38/223 (17%), Positives = 78/223 (34%), Gaps = 34/223 (15%) Query: 3 QYHKFQRELYCDLQGENIEAFNSA-SKTVKCLQLANGAVYYDEEKHWKEV---------- 51 Y Q + G + A + +QL + +H + + Sbjct: 963 LYRHMQAKGILLTDGSEKDKKGGAKTLMNTIMQLRKICNHPYMFQHIEGLVRPPASRSCR 1022 Query: 52 ---HDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAF---------PQGRTLDKD 97 K + L+ I+ +A +++ S + ++ F G T +D Sbjct: 1023 LYRASGKFELLDRILPKLRATNHRVLLFCQMTSLMTIMEDYFAFRNFLYLRLDGTTKSED 1082 Query: 98 PCTI-QEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 + +++NE + + + G GLNLQ + +V F W+ + Q Sbjct: 1083 RAALLKKFNEPGSQYFIFLLSTRAGGLGLNLQ-AADTVVIFDSDWNPHQDLQA-----QD 1136 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 R + G + V V L N+++E +L + K + ++ A Sbjct: 1137 RAHRIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQA 1179 >gi|116192043|ref|XP_001221834.1| hypothetical protein CHGG_05739 [Chaetomium globosum CBS 148.51] gi|88181652|gb|EAQ89120.1| hypothetical protein CHGG_05739 [Chaetomium globosum CBS 148.51] Length = 487 Score = 88.1 bits (217), Expect = 7e-16, Method: Composition-based stats. Identities = 26/119 (21%), Positives = 50/119 (42%), Gaps = 9/119 (7%) Query: 84 LQKAFPQGRTLDKDPCTI-QEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWD 140 + G T +D + E+N P + + G GLNLQ + ++ + W+ Sbjct: 13 ITYLRLDGTTKSEDRSDLLYEFNRPDSPYFMFLLSTRAGGLGLNLQT-ADTVIIYDSDWN 71 Query: 141 LEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 + Q R + G K V + LI+ +++E +L+R R K + ++ A + Sbjct: 72 PHQDLQA-----QDRAHRIGQKNEVRILRLISSASVEEKILERARYKLDMDGKVIQAGR 125 >gi|302502694|ref|XP_003013308.1| hypothetical protein ARB_00493 [Arthroderma benhamiae CBS 112371] gi|291176871|gb|EFE32668.1| hypothetical protein ARB_00493 [Arthroderma benhamiae CBS 112371] Length = 1110 Score = 88.1 bits (217), Expect = 7e-16, Method: Composition-based stats. Identities = 35/163 (21%), Positives = 67/163 (41%), Gaps = 21/163 (12%) Query: 45 EKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFN---------SDLARLQKAFPQGRT 93 K W ++ K+ L +++ AN I+V F + +++ G+T Sbjct: 917 NKEW--MNSGKVDKLCELLDNYIANGDRILVFSQFTMVMDILELVLETQKIKFFRLDGKT 974 Query: 94 LDKDPCTI-QEWNEG-KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERI 151 +D +I ++E IP+ + G G+NL N ++ F ++ +E Q Sbjct: 975 SVEDRQSILDAFHEQVDIPVFMLSTKAGGAGINL-ACANKVIIFDSSFNPQEDIQA---- 1029 Query: 152 GVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 R + G R V V L+ + TI+E + +TK + + Sbjct: 1030 -ENRAHRVGQTREVEVVRLVTRGTIEEQIHALGQTKLALDQRV 1071 >gi|254576891|ref|XP_002494432.1| ZYRO0A01342p [Zygosaccharomyces rouxii] gi|238937321|emb|CAR25499.1| ZYRO0A01342p [Zygosaccharomyces rouxii] Length = 1343 Score = 88.1 bits (217), Expect = 7e-16, Method: Composition-based stats. Identities = 38/196 (19%), Positives = 76/196 (38%), Gaps = 30/196 (15%) Query: 28 KTVKCLQLANGAVYYDEEKHWKEVHDE----------KIKALEVIIEK--ANAAPIIVAY 75 K ++ ++ N +DE + + K + L+ ++ K A+ +++ + Sbjct: 751 KIMQLRKICNHPFVFDEVESVINPSRQNTPLLYRVAGKFELLDRVLPKFKASGHRVLMFF 810 Query: 76 H------FNSDLARLQ---KAFPQGRTLDKDPC-TIQEWN--EGKIPLLFAHPASCGHGL 123 D RL+ G T +D ++E+N + G GL Sbjct: 811 QMTQVMDIMEDFLRLRDHKYMRLDGATKTEDRQEMLREFNAENSDYFCFLLSTRAGGLGL 870 Query: 124 NLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQR 183 NLQ + ++ F W+ + Q R + G K V + LI ++++E++L+R Sbjct: 871 NLQ-SADTVIIFDTDWNPHQDLQA-----QDRAHRIGQKNEVRILRLITTDSVEEVILER 924 Query: 184 LRTKSTIQDLLLNALK 199 K I ++ A K Sbjct: 925 AMQKLDIDGKVIQAGK 940 >gi|162464313|ref|NP_001105087.1| chromatin complex subunit A101 [Zea mays] gi|18463957|gb|AAL73042.1|AF461813_1 chromatin complex subunit A101 [Zea mays] Length = 779 Score = 88.1 bits (217), Expect = 7e-16, Method: Composition-based stats. Identities = 24/158 (15%), Positives = 59/158 (37%), Gaps = 23/158 (14%) Query: 50 EVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQK----------AFPQGRTLDKDPC 99 ++ D + L A ++V + L ++ L++ Sbjct: 538 QLFDRLLNFLM-----AQKHKVLVFSQWTKVLDIIEYYLDSKGHAVCRIDGNVKLEERRR 592 Query: 100 TIQEWN--EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 I E+N + + + G G+NL + + + W+ + Q ++R Sbjct: 593 QIAEFNDVNSSMRIFLLSTRAGGLGINLT-AADTCILYDSDWNPQMDLQAMDRC-----H 646 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 + G R V VY L ++++ +++R K ++ +++ Sbjct: 647 RIGQTRPVHVYRLATSHSVEGRMIKRAFGKLKLEHVVI 684 >gi|226706291|sp|B5DE69|CHD8_XENTR RecName: Full=Chromodomain-helicase-DNA-binding protein 8; Short=CHD-8; AltName: Full=ATP-dependent helicase CHD8 Length = 2184 Score = 88.1 bits (217), Expect = 7e-16, Method: Composition-based stats. Identities = 25/153 (16%), Positives = 53/153 (34%), Gaps = 18/153 (11%) Query: 65 KANAAPIIVAYHFNSDLARLQKAFPQGRTL----------DKDPCTIQEWNEGKIP--LL 112 +A +++ L L+ Q R L + I ++ + Sbjct: 1090 RAGGHKVLIFSQMVRCLDILEDYLIQRRYLYERIDGRVRGNMRQAAIDRFSRPDSDRFVF 1149 Query: 113 FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIA 172 + G G+NL + + F W+ + Q R + G +AV +Y LI Sbjct: 1150 LLCTRAGGLGINLT-AADTCIIFDSDWNPQNDLQAQARC-----HRIGQSKAVKIYRLIT 1203 Query: 173 QNTIDELVLQRLRTKSTIQDLLLNALKKETIHV 205 +N+ + + + K + +L ++ H+ Sbjct: 1204 RNSYEREMFDKASLKLGLDKAVLQSMSGRDNHL 1236 >gi|114651881|ref|XP_001153522.1| PREDICTED: chromodomain helicase DNA binding protein 8 isoform 3 [Pan troglodytes] Length = 2556 Score = 88.1 bits (217), Expect = 7e-16, Method: Composition-based stats. Identities = 29/177 (16%), Positives = 62/177 (35%), Gaps = 20/177 (11%) Query: 36 ANGAVYYDEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRT 93 A + +D K+ ++ ++ K A +++ L L+ Q R Sbjct: 1090 ACHIIPHDFHLQAMVRSAGKLVLIDKLLPKLKAGGHKVLIFSQMVRCLDILEDYLIQRRY 1149 Query: 94 L----------DKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDL 141 L + I +++ + + G G+NL + + F W+ Sbjct: 1150 LYERIDGRVRGNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLT-AADTCIIFDSDWNP 1208 Query: 142 EEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNAL 198 + Q R + G +AV VY LI +N+ + + + K + +L ++ Sbjct: 1209 QNDLQAQARC-----HRIGQSKAVKVYRLITRNSYEREMFDKASLKLGLDKAVLQSM 1260 >gi|22328039|ref|NP_201200.2| CHR24 (chromatin remodeling 24); ATP binding / DNA binding / helicase/ nucleic acid binding [Arabidopsis thaliana] gi|18087573|gb|AAL58917.1|AF462829_1 AT5g63950/MBM17_5 [Arabidopsis thaliana] gi|22655364|gb|AAM98274.1| At5g63950/MBM17_5 [Arabidopsis thaliana] gi|332010436|gb|AED97819.1| protein chromatin remodeling 24 [Arabidopsis thaliana] Length = 1090 Score = 88.1 bits (217), Expect = 7e-16, Method: Composition-based stats. Identities = 29/164 (17%), Positives = 61/164 (37%), Gaps = 19/164 (11%) Query: 40 VYYDEEKHWKEVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQKAF--------- 88 V D+ + + K+ + ++E +++ L +Q + Sbjct: 718 VDTDDFQTKNDSISCKLSFIMSLLENLIPEGHRVLIFSQTRKMLNLIQDSLTSNGYSFLR 777 Query: 89 PQGRTLDKDP-CTIQEWNEGKI-PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 G T D T++E+ EG + P+ G GL L + ++ W+ Q Sbjct: 778 IDGTTKAPDRLKTVEEFQEGHVAPIFLLTSQVGGLGLTLTK-ADRVIVVDPAWNPSTDNQ 836 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 ++R + G + V VY L+ T++E + ++ K + Sbjct: 837 SVDR-----AYRIGQTKDVIVYRLMTSATVEEKIYRKQVYKGGL 875 >gi|242011216|ref|XP_002426351.1| conserved hypothetical protein [Pediculus humanus corporis] gi|212510428|gb|EEB13613.1| conserved hypothetical protein [Pediculus humanus corporis] Length = 4944 Score = 88.1 bits (217), Expect = 7e-16, Method: Composition-based stats. Identities = 25/146 (17%), Positives = 51/146 (34%), Gaps = 18/146 (12%) Query: 65 KANAAPIIVAYHFNSDLARLQKAFP---------QGRTL-DKDPCTIQEWNEGKIP--LL 112 K+N +++ L L+ GR D I + + Sbjct: 2452 KSNGHRVLIFSQMVKCLDILEDYLIYRKYSFERIDGRIRGDLRQAAIDRFCRPDSDRFVF 2511 Query: 113 FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIA 172 + G G+NL + ++ + W+ + Q R + G ++ V VY LI Sbjct: 2512 LLCTKAGGLGINLT-AADTVIIYDSDWNPQNDLQAQARC-----HRIGQQKMVKVYRLIC 2565 Query: 173 QNTIDELVLQRLRTKSTIQDLLLNAL 198 +NT + + + K + +L ++ Sbjct: 2566 RNTYEREMFDKASLKLGLDKAVLQSM 2591 >gi|33864422|ref|NP_895982.1| SNF2/helicase domain-containing protein [Prochlorococcus marinus str. MIT 9313] gi|33641202|emb|CAE22332.1| SNF2 related domain:DEAD/DEAH box helicase [Prochlorococcus marinus str. MIT 9313] Length = 1099 Score = 88.1 bits (217), Expect = 7e-16, Method: Composition-based stats. Identities = 23/116 (19%), Positives = 44/116 (37%), Gaps = 9/116 (7%) Query: 83 RLQKAFPQGRTLDKDPC-TIQEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWW 139 R + F G T + + + E L + G GLNL + + WW Sbjct: 966 RFEVPFLHGSTSKTERQAMVDRFQEDPRGPQLFLLSLKAGGVGLNLTRASH-VFHVDRWW 1024 Query: 140 DLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 + Q +R + G V V+ I +++E + + +R KS + + ++ Sbjct: 1025 NPAVENQATDR-----AYRIGQTSRVMVHKFITSGSVEEKIDRMIREKSRLAEDII 1075 >gi|322499769|emb|CBZ34843.1| unnamed protein product [Leishmania donovani BPK282A1] Length = 1044 Score = 88.1 bits (217), Expect = 7e-16, Method: Composition-based stats. Identities = 27/164 (16%), Positives = 59/164 (35%), Gaps = 20/164 (12%) Query: 51 VHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQ----------KAFPQGRTLDKDP 98 K++ L+ ++ + A ++ +F + L L+ + + Sbjct: 601 DPSAKMRYLDTLLPQLKAQGHRCLIFSNFTTTLDLLEAMCHLRGHSYERLDGSCNRVERE 660 Query: 99 CTIQEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 ++ +N L + G G+ L G + ++ F ++R R Sbjct: 661 LSMLRYNHPASSCFLFLVTTTAGGVGVTLT-GADTVILFD-----AHFNPQLDRQAADRA 714 Query: 157 RQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKK 200 + G R V VY L Q TI+E + K+ + D ++ ++ Sbjct: 715 HRIGQTRTVHVYRLCLQGTIEEHIRDIAARKAYLGDFIVEGGQR 758 >gi|322492504|emb|CBZ27779.1| putative helicase-like protein [Leishmania mexicana MHOM/GT/2001/U1103] Length = 1044 Score = 88.1 bits (217), Expect = 7e-16, Method: Composition-based stats. Identities = 27/164 (16%), Positives = 59/164 (35%), Gaps = 20/164 (12%) Query: 51 VHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQ----------KAFPQGRTLDKDP 98 K++ L+ ++ + A ++ +F + L L+ + + Sbjct: 598 DPSAKMRYLDTLLPQLKAQGHRCLIFSNFTTTLDLLEAMCHLRGHSYERLDGSCNRVERE 657 Query: 99 CTIQEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 ++ +N L + G G+ L G + ++ F ++R R Sbjct: 658 LSMLRYNHPASSCFLFLVTTTAGGVGVTLT-GADTVILFD-----AHFNPQLDRQAADRA 711 Query: 157 RQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKK 200 + G R V VY L Q TI+E + K+ + D ++ ++ Sbjct: 712 HRIGQTRTVHVYRLCLQGTIEEHIRDIAARKAYLGDFIVEGGQR 755 >gi|270007595|gb|EFA04043.1| hypothetical protein TcasGA2_TC014275 [Tribolium castaneum] Length = 4075 Score = 88.1 bits (217), Expect = 7e-16, Method: Composition-based stats. Identities = 23/146 (15%), Positives = 52/146 (35%), Gaps = 18/146 (12%) Query: 65 KANAAPIIVAYHFNSDLARLQKAF---------PQGRTL-DKDPCTIQEWNEGKIP--LL 112 KAN +++ L L+ GR + I ++ + Sbjct: 1919 KANGHRVLIFSQMVRCLDILEDYLMFRKYPFERIDGRIRGNLRQAAIDRFSRPDSDRFVF 1978 Query: 113 FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIA 172 + G G+NL + ++ + W+ + Q R + G ++ V +Y L+ Sbjct: 1979 LLCTKAGGLGINLT-AADTVIIYDSDWNPQNDLQAQARC-----HRIGQQKMVKIYRLLC 2032 Query: 173 QNTIDELVLQRLRTKSTIQDLLLNAL 198 +NT + + + K + +L ++ Sbjct: 2033 RNTYEREMFDKASLKLGLDKAILQSM 2058 >gi|198420785|ref|XP_002121862.1| PREDICTED: similar to DNA excision repair protein ERCC-6 (ATP-dependent helicase ERCC6) (Cockayne syndrome protein CSB) [Ciona intestinalis] Length = 1155 Score = 88.1 bits (217), Expect = 7e-16, Method: Composition-based stats. Identities = 31/174 (17%), Positives = 59/174 (33%), Gaps = 19/174 (10%) Query: 41 YYDEEKHWKEVHDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAFP--------- 89 Y D + K+ +E ++ K +++ L L+ Sbjct: 329 YGDSRRFGYWRRSGKMVVVESLLRIWKKQGKKVLLFTQSRKMLGILEDFVKSRSYCYLTM 388 Query: 90 --QGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQM 147 Q + P + + I + G G+NL G + +V + W+ Q Sbjct: 389 HGQTSVQARQPLVKKFNEDPSIFVFILTTRVGGLGVNL-IGADRVVIYDPDWNPSTDTQA 447 Query: 148 IERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 ER + G + V +Y L+ TI+E + R K + + +L K+ Sbjct: 448 QERSW-----RIGQTKQVTIYRLVTSGTIEEKIYHRQIFKQFMTNRVLKDPKQR 496 >gi|164656625|ref|XP_001729440.1| hypothetical protein MGL_3475 [Malassezia globosa CBS 7966] gi|159103331|gb|EDP42226.1| hypothetical protein MGL_3475 [Malassezia globosa CBS 7966] Length = 1687 Score = 88.1 bits (217), Expect = 7e-16, Method: Composition-based stats. Identities = 25/141 (17%), Positives = 57/141 (40%), Gaps = 20/141 (14%) Query: 69 APIIVAYHFNSDLARLQK-------------AFPQGRTLDKDPCTIQEWN-EGKIPLLFA 114 +++ L +++ + D+ +Q +N + I +L Sbjct: 1476 HRVLIFCQMKQMLDVIERDLFRALMPSVTYLRLDGSVSSDRRHGIVQSFNADPSIDILLL 1535 Query: 115 HPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQN 174 + G GL L G + ++F W+ + Q ++R + G K+ V VY LI ++ Sbjct: 1536 TTSVGGLGLTLT-GADTVIFVEHDWNPMKDLQAMDR-----AHRLGQKKVVNVYRLITRD 1589 Query: 175 TIDELVLQRLRTKSTIQDLLL 195 T++ ++ + K I + ++ Sbjct: 1590 TLEANIMGLQQFKMNIANSVV 1610 >gi|146089132|ref|XP_001466244.1| helicase [Leishmania infantum JPCM5] gi|134070346|emb|CAM68683.1| putative helicase-like protein [Leishmania infantum JPCM5] Length = 1044 Score = 88.1 bits (217), Expect = 7e-16, Method: Composition-based stats. Identities = 27/164 (16%), Positives = 59/164 (35%), Gaps = 20/164 (12%) Query: 51 VHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQ----------KAFPQGRTLDKDP 98 K++ L+ ++ + A ++ +F + L L+ + + Sbjct: 601 DPSAKMRYLDTLLPQLKAQGHRCLIFSNFTTTLDLLEAMCHLRGHSYERLDGSCNRVERE 660 Query: 99 CTIQEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 ++ +N L + G G+ L G + ++ F ++R R Sbjct: 661 LSMLRYNHPASSCFLFLVTTTAGGVGVTLT-GADTVILFD-----AHFNPQLDRQAADRA 714 Query: 157 RQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKK 200 + G R V VY L Q TI+E + K+ + D ++ ++ Sbjct: 715 HRIGQTRTVHVYRLCLQGTIEEHIRDIAARKAYLGDFIVEGGQR 758 >gi|212549607|ref|NP_001131089.1| chromodomain-helicase-DNA-binding protein 8 [Xenopus (Silurana) tropicalis] gi|197246330|gb|AAI68549.1| Unknown (protein for MGC:184754) [Xenopus (Silurana) tropicalis] Length = 2179 Score = 88.1 bits (217), Expect = 8e-16, Method: Composition-based stats. Identities = 25/153 (16%), Positives = 53/153 (34%), Gaps = 18/153 (11%) Query: 65 KANAAPIIVAYHFNSDLARLQKAFPQGRTL----------DKDPCTIQEWNEGKIP--LL 112 +A +++ L L+ Q R L + I ++ + Sbjct: 1085 RAGGHKVLIFSQMVRCLDILEDYLIQRRYLYERIDGRVRGNMRQAAIDRFSRPDSDRFVF 1144 Query: 113 FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIA 172 + G G+NL + + F W+ + Q R + G +AV +Y LI Sbjct: 1145 LLCTRAGGLGINLT-AADTCIIFDSDWNPQNDLQAQARC-----HRIGQSKAVKIYRLIT 1198 Query: 173 QNTIDELVLQRLRTKSTIQDLLLNALKKETIHV 205 +N+ + + + K + +L ++ H+ Sbjct: 1199 RNSYEREMFDKASLKLGLDKAVLQSMSGRDNHL 1231 >gi|146417440|ref|XP_001484689.1| hypothetical protein PGUG_02418 [Meyerozyma guilliermondii ATCC 6260] Length = 847 Score = 88.1 bits (217), Expect = 8e-16, Method: Composition-based stats. Identities = 25/167 (14%), Positives = 56/167 (33%), Gaps = 23/167 (13%) Query: 45 EKHWKEVHDEKIKALEV----IIEKANAAPIIVAYHFNSDLARLQKAFPQG--------- 91 W+ KI+AL + + IV F S L ++ + Sbjct: 669 GGEWR--SSTKIEALVEELYKLRSDRHTIKSIVFSQFTSMLDLIEWRLKRAGFETVKLQG 726 Query: 92 --RTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIE 149 +D + + + G LNL + + WW+ Q ++ Sbjct: 727 SMSPQQRDNTIRHFMENTGVEVFLVSLKAGGVALNLCE-ASQVFLMDPWWNPSVEWQSMD 785 Query: 150 RIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 R+ + G KR + + +++I+ +++ K+ + + +N Sbjct: 786 RV-----HRIGQKRPIRITRFCIEDSIELKIIELQEKKANMINATIN 827 >gi|50551961|ref|XP_503455.1| YALI0E02332p [Yarrowia lipolytica] gi|49649324|emb|CAG79034.1| YALI0E02332p [Yarrowia lipolytica] Length = 1028 Score = 87.7 bits (216), Expect = 8e-16, Method: Composition-based stats. Identities = 28/158 (17%), Positives = 65/158 (41%), Gaps = 19/158 (12%) Query: 56 IKALEVIIEKANAAPIIVAYHFNSDLARL---------QKAFPQGRTLDKDP-CTIQEWN 105 + L I++ + +++ + L L + G+T +D I +N Sbjct: 465 LDKLLKRIQE-QGSRVLIFSQMSRVLDILEDYCLFRGYKYCRIDGQTAHEDRINAIDAYN 523 Query: 106 E--GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKR 163 + + + + G G+NL + +V + W+ + Q ++R + G + Sbjct: 524 KEGSEKFVFLLTTRAGGLGINLTT-ADQVVLYDSDWNPQADLQAMDR-----AHRIGQTK 577 Query: 164 AVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 V+VY I +N ++E V++R K + L++ + + Sbjct: 578 QVYVYRFITENAVEEKVIERATQKLRLDKLVIQQGRSQ 615 >gi|46111685|ref|XP_382900.1| hypothetical protein FG02724.1 [Gibberella zeae PH-1] gi|85540718|sp|Q4IJ84|RAD5_GIBZE RecName: Full=DNA repair protein RAD5 Length = 1154 Score = 87.7 bits (216), Expect = 8e-16, Method: Composition-based stats. Identities = 31/158 (19%), Positives = 55/158 (34%), Gaps = 21/158 (13%) Query: 52 HDEKIKALEV----IIEKANAAPIIVAYHFNSDLARLQKAFPQGRTL----------DKD 97 K+ AL + + +V F S L+ ++ A + Sbjct: 982 SSAKVVALMSELRALRREHPKMKSVVFSQFTSFLSLIEPALTRANIKFLRLDGSMAQKAR 1041 Query: 98 PCTIQEWNEGK-IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 + E+ E K +L + G GLNL G + WW Q I+R+ Sbjct: 1042 AAVLNEFTEKKGFTILLLSLRAGGVGLNLTSAG-RVFMMDPWWSFAVEAQAIDRV----- 1095 Query: 157 RQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 + G + V V + + +++E +L+ K I L Sbjct: 1096 HRMGQEAEVQVKRFVVKESVEERMLKVQERKKFIATSL 1133 >gi|258564558|ref|XP_002583024.1| DNA repair protein RAD16 [Uncinocarpus reesii 1704] gi|237908531|gb|EEP82932.1| DNA repair protein RAD16 [Uncinocarpus reesii 1704] Length = 896 Score = 87.7 bits (216), Expect = 8e-16, Method: Composition-based stats. Identities = 30/168 (17%), Positives = 57/168 (33%), Gaps = 21/168 (12%) Query: 51 VHDEKIKALE----VIIEKANAAPIIVAYHFNSDLA----RLQKAFPQGRTLDKDPCTIQ 102 KI+ L + K IV F S L RL +A LD +Q Sbjct: 720 TSSTKIEMLVYDLYKLRSKKQTHKSIVFSQFTSMLQLVEWRLHRAGISTVMLDGSMTPVQ 779 Query: 103 EW-------NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTR 155 N + + + G LNL + + WW+ Q +R Sbjct: 780 RQKSIDYFMNNVDVEVFLVSLKAGGVALNLTEASRVFI-VDPWWNPAAEWQSADRC---- 834 Query: 156 QRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETI 203 + G +R + L +++++ ++ K+ + + +N + E + Sbjct: 835 -HRIGQRRPCVITKLCIEDSVESRMVLLQEKKANMINGTINKDQSEAL 881 >gi|189208600|ref|XP_001940633.1| DNA repair and recombination protein RAD26 [Pyrenophora tritici-repentis Pt-1C-BFP] gi|187976726|gb|EDU43352.1| DNA repair and recombination protein RAD26 [Pyrenophora tritici-repentis Pt-1C-BFP] Length = 1311 Score = 87.7 bits (216), Expect = 8e-16, Method: Composition-based stats. Identities = 35/188 (18%), Positives = 68/188 (36%), Gaps = 28/188 (14%) Query: 27 SKTVKCLQLANGAVYYDEEK-------HWKEVHDEKIKALEVIIE--KANAAPIIVAYHF 77 +K ++ LQLA + + D + + K K L +++ +N +++ H Sbjct: 610 AKDLQTLQLACPSTFKDLFQIRDNILVQSQREFCGKWKVLRRLLDFWHSNGDKVLIFSHS 669 Query: 78 NSDLARLQKAFPQGRTL------------DKDPCTIQEWN-EGKIPLLFAHPASCGHGLN 124 L L+ F T + + ++N + + + G GLN Sbjct: 670 VRLLRLLRGLFDVDGTKYNFSYLDGSMKYEDRSQAVADFNADPNQFVFLISTKAGGVGLN 729 Query: 125 LQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRL 184 + ++V W+ Q R + G R V V+ L++ TI+E+V R Sbjct: 730 ITSANKVVVM-DPHWNPAYDLQA-----QDRAYRIGQTRNVEVFRLVSSGTIEEVVYARQ 783 Query: 185 RTKSTIQD 192 K + Sbjct: 784 IYKQQQAN 791 >gi|168022943|ref|XP_001763998.1| SNF2 family DNA-dependent ATPase [Physcomitrella patens subsp. patens] gi|162684737|gb|EDQ71137.1| SNF2 family DNA-dependent ATPase [Physcomitrella patens subsp. patens] Length = 719 Score = 87.7 bits (216), Expect = 8e-16, Method: Composition-based stats. Identities = 23/140 (16%), Positives = 50/140 (35%), Gaps = 17/140 (12%) Query: 68 AAPIIVAYHFNSDLARLQKAFPQ----------GRTLDKDPCTIQEWNEGKIP-LLFAHP 116 +++ L L+ + G I+ +NE K + Sbjct: 481 GHKVLIFSQMTKILDLLEYYLEERGHNPCRIDGGVQQSVRQEQIRSFNEEKSRFVFLLST 540 Query: 117 ASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTI 176 + G G+NL + ++ + W+ Q ++R + G R V VY L ++ Sbjct: 541 RAGGLGINLT-AADTVILYDSDWNPHMDMQAMDRC-----HRIGQTRPVHVYRLATAKSV 594 Query: 177 DELVLQRLRTKSTIQDLLLN 196 + +L+ K ++ L++ Sbjct: 595 ECHMLKVATGKLKLEHLVIE 614 >gi|123445199|ref|XP_001311362.1| F/Y-rich N-terminus family protein [Trichomonas vaginalis G3] gi|121893168|gb|EAX98432.1| F/Y-rich N-terminus family protein [Trichomonas vaginalis G3] Length = 1639 Score = 87.7 bits (216), Expect = 8e-16, Method: Composition-based stats. Identities = 31/190 (16%), Positives = 59/190 (31%), Gaps = 19/190 (10%) Query: 20 IEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKA--NAAPIIVAYHF 77 I A K QL + E K+ ++ ++ +++ Sbjct: 532 ITGAEDAILIEKMQQLGLKERTNEFELETLIRTSGKLILVDKLLANLKKEGHRVLIFSQM 591 Query: 78 NSDLARLQ---------KAFPQGRTLDKDPCT-IQEWNE-GKIPLLFAHPASCGHGLNLQ 126 L LQ G KD I ++ E I + + G G+NL Sbjct: 592 TKMLDLLQDMLTYRNYKYRRIDGTVRGKDRQASIDDFQEQEDIFVFLLCTRAGGVGINLT 651 Query: 127 YGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRT 186 + + + W+ + Q R + G + V +Y LI +N+ + + Sbjct: 652 -SADRCIIYDSDWNPQNDIQATARC-----HRIGQTKEVKMYRLITKNSYERSMFDTASK 705 Query: 187 KSTIQDLLLN 196 K + +L Sbjct: 706 KLGLDKAILE 715 >gi|71018359|ref|XP_759410.1| hypothetical protein UM03263.1 [Ustilago maydis 521] gi|46098957|gb|EAK84190.1| hypothetical protein UM03263.1 [Ustilago maydis 521] Length = 1054 Score = 87.7 bits (216), Expect = 8e-16, Method: Composition-based stats. Identities = 27/159 (16%), Positives = 61/159 (38%), Gaps = 21/159 (13%) Query: 52 HDEKIKAL-EVIIE-KANAAPI--IVAYHFNSDLARLQKAFPQGRTL----------DKD 97 KI+AL E + + +++ I +V F + L + + + Sbjct: 881 SSTKIEALVEELTQLRSDDKTIKSLVFSQFVNFLDLIAFRLQRAGFQICRLEGNMSPEAR 940 Query: 98 PCTIQEW-NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 TI+ + + + + G LNL + + WW+ Q ++RI Sbjct: 941 NRTIKHFMENPGVTVFLVSLKAGGVALNLTE-ASRVYLMDPWWNPSVEVQAMDRI----- 994 Query: 157 RQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 + G R + V ++ +N+I+ +++ KS + + + Sbjct: 995 HRLGQHRPIIVKRMVIENSIESRIIELQNKKSAMIEAAI 1033 >gi|296214425|ref|XP_002753816.1| PREDICTED: chromodomain-helicase-DNA-binding protein 8 isoform 1 [Callithrix jacchus] Length = 2583 Score = 87.7 bits (216), Expect = 8e-16, Method: Composition-based stats. Identities = 29/177 (16%), Positives = 62/177 (35%), Gaps = 20/177 (11%) Query: 36 ANGAVYYDEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRT 93 A + +D K+ ++ ++ K A +++ L L+ Q R Sbjct: 1115 ACHIIPHDFHLQAMVRSAGKLVLIDKLLPKLKAGGHKVLIFSQMVRCLDILEDYLIQRRY 1174 Query: 94 L----------DKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDL 141 L + I +++ + + G G+NL + + F W+ Sbjct: 1175 LYERIDGRVRGNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLT-AADTCIIFDSDWNP 1233 Query: 142 EEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNAL 198 + Q R + G +AV VY LI +N+ + + + K + +L ++ Sbjct: 1234 QNDLQAQARC-----HRIGQSKAVKVYRLITRNSYEREMFDKASLKLGLDKAVLQSM 1285 >gi|242023690|ref|XP_002432264.1| Chromodomain helicase-DNA-binding protein, putative [Pediculus humanus corporis] gi|212517673|gb|EEB19526.1| Chromodomain helicase-DNA-binding protein, putative [Pediculus humanus corporis] Length = 1999 Score = 87.7 bits (216), Expect = 8e-16, Method: Composition-based stats. Identities = 24/146 (16%), Positives = 52/146 (35%), Gaps = 20/146 (13%) Query: 57 KALEVIIEKANAAPIIVAYHFNSDLARLQ----------KAFPQGRTLDKDPCTIQEWNE 106 K L+++ E+ +++ L L+ + T + I +N Sbjct: 1032 KMLKLLREQ--GHRVLIFSQMTKMLDLLEDYLEGEGYKYERIDGSITGNLRQEAIDRFNA 1089 Query: 107 GKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA 164 P + G G+NL + ++ + W+ Q +R + G Sbjct: 1090 PGAPQFAFLLSTRAGGLGINL-ATADTVIIYDSDWNPHNDIQA-----FSRAHRIGQSNK 1143 Query: 165 VFVYYLIAQNTIDELVLQRLRTKSTI 190 V +Y + +N+++E V Q + K + Sbjct: 1144 VMIYRFVTRNSVEERVTQVAKRKMML 1169 >gi|164423632|ref|XP_962645.2| hypothetical protein NCU07975 [Neurospora crassa OR74A] gi|157070175|gb|EAA33409.2| conserved hypothetical protein [Neurospora crassa OR74A] Length = 898 Score = 87.7 bits (216), Expect = 8e-16, Method: Composition-based stats. Identities = 36/176 (20%), Positives = 65/176 (36%), Gaps = 21/176 (11%) Query: 30 VKCLQLA-NGAVYYDEEKHWKEVHDEKIKALEVIIEKA---NAAPIIVAYHFNSDLARLQ 85 K L+ A + DEE+ E K +A+ +++ + II+ + S L +Q Sbjct: 701 DKLLEPAPEHSATQDEEELESETKSSKTEAVLALVKGTLDKEGSKIIIFSQWTSFLTIIQ 760 Query: 86 KAFPQGR-----------TLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVF 134 + +D + +L A C GLNL + ++ Sbjct: 761 HQLDEAGYTYTRIDGSMNAAQRDAAIRALDYDPNTRILLASLGVCSVGLNL-VSADTVIL 819 Query: 135 FSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 WW Q ++R+ + G R V+ L+ N+I+E VL + K + Sbjct: 820 ADSWWAPAIEDQAVDRV-----HRLGQTRPTTVWRLVMDNSIEERVLDIQKEKREL 870 >gi|298385406|ref|ZP_06994964.1| zinc finger Ran-binding domain-containing protein 3 [Bacteroides sp. 1_1_14] gi|298261547|gb|EFI04413.1| zinc finger Ran-binding domain-containing protein 3 [Bacteroides sp. 1_1_14] Length = 502 Score = 87.7 bits (216), Expect = 8e-16, Method: Composition-based stats. Identities = 33/137 (24%), Positives = 54/137 (39%), Gaps = 13/137 (9%) Query: 68 AAPIIVAYHFNSDLARLQKAFPQGRT-------LDKDPCTIQEWNEGKIPLLFAHPASCG 120 +IV + + LQK FP+ T ++K N + L+ + G Sbjct: 349 GKKLIVFCSLHEIVDELQKVFPKAVTVTGRDSAINKQASVDAFQNNPNVQLIICSIKAAG 408 Query: 121 HGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELV 180 GL L N + F L W + Q +R + G K V YYL+ + TID + Sbjct: 409 VGLTLTASSN-VAFIELAWTYADCCQCEDR-----AHRIGQKDNVTCYYLLGRGTIDHTI 462 Query: 181 LQRLRTKSTIQDLLLNA 197 + K +I ++N+ Sbjct: 463 YSLIHRKKSIASEIMNS 479 >gi|240278273|gb|EER41780.1| transcription termination factor 2 [Ajellomyces capsulatus H143] Length = 536 Score = 87.7 bits (216), Expect = 8e-16, Method: Composition-based stats. Identities = 37/170 (21%), Positives = 65/170 (38%), Gaps = 20/170 (11%) Query: 41 YYDEEKHWKEVHDEKIKALEVIIEKANAAPI--IVAYHFNSDLARLQKAFPQGR------ 92 Y K + + +E E + API IV + S L ++ A Sbjct: 351 YEGPHTKTKALISHLLDTIEESKEAPDEAPIKSIVFSSWTSHLDLIEIAMEDNGITTFTR 410 Query: 93 -----TLDKDPCTIQEWNEGK-IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 TL + I + E + +L A + G GLNL G + + ++ Q Sbjct: 411 LDGTMTLKQRNAAIDAFREDDNVTILLATLGAGGVGLNLTAGSRVYIM-EPQYNPAAIAQ 469 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 ++R+ + G R V I +++I+E + + R K + D+ LN Sbjct: 470 AVDRV-----HRLGQTREVTTIQFIMKDSIEEKIAELARKKQQMADMSLN 514 >gi|326671885|ref|XP_003199545.1| PREDICTED: chromodomain-helicase-DNA-binding protein 5 [Danio rerio] Length = 1985 Score = 87.7 bits (216), Expect = 8e-16, Method: Composition-based stats. Identities = 22/160 (13%), Positives = 54/160 (33%), Gaps = 20/160 (12%) Query: 45 EKHWKEVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQ----------KAFPQGR 92 + + K+ L+ ++ K +++ L L+ + G Sbjct: 1022 DGNLLVKSSGKLTLLQKMLIKLKDGGHRVLIFSQMTKMLDLLEDFLEFEGYKYERIDGGI 1081 Query: 93 TLDKDPCTIQEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 T I +N + + G G+NL + ++ + W+ Q Sbjct: 1082 TGGLRQEAIDRFNAPGAQQFCFLLSTRAGGLGINL-ATADTVIIYDSDWNPHNDIQA--- 1137 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 +R + G + V +Y + + +++E + Q + K + Sbjct: 1138 --FSRAHRIGQNKKVMIYRFVTRASVEERITQVAKRKMML 1175 >gi|126342880|ref|XP_001372665.1| PREDICTED: hypothetical protein [Monodelphis domestica] Length = 1189 Score = 87.7 bits (216), Expect = 8e-16, Method: Composition-based stats. Identities = 33/194 (17%), Positives = 68/194 (35%), Gaps = 25/194 (12%) Query: 12 YCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDE-KIKALEVIIEKA--NA 68 C L G + + ++ QL + + D+ H + + K+ L ++++ Sbjct: 422 VCSLLGLKGSSLSGGDES----QLVHSDIQMDQIPHDSLMQESGKVIFLMALLKRLQDEG 477 Query: 69 APIIVAYHFNSDLARLQKAFP-----------QGRTLDKDPCTIQEWNEGK-IPLLFAHP 116 +V L ++ L + I + + + + + Sbjct: 478 HQTLVFSQSRKLLDIIEHLLKAEHFKTLRIDGTVTHLSERQRRIDLFQQSRGVSVFLLTS 537 Query: 117 ASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTI 176 G GL L +V F W+ Q ++R+ + G K V VY LI T+ Sbjct: 538 QVGGVGLTLT-AATRVVIFDPSWNPATDAQAVDRV-----YRIGQKENVVVYRLITCGTV 591 Query: 177 DELVLQRLRTKSTI 190 +E + +R K ++ Sbjct: 592 EEKIYRRQVFKDSL 605 >gi|182434811|ref|YP_001822530.1| hypothetical protein SGR_1018 [Streptomyces griseus subsp. griseus NBRC 13350] gi|178463327|dbj|BAG17847.1| conserved hypothetical protein [Streptomyces griseus subsp. griseus NBRC 13350] Length = 743 Score = 87.7 bits (216), Expect = 8e-16, Method: Composition-based stats. Identities = 34/191 (17%), Positives = 76/191 (39%), Gaps = 24/191 (12%) Query: 14 DLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKAN--AAPI 71 +L E+ EA+ A + + ++ A Y E K+ L ++++A+ + Sbjct: 525 ELGAEDREAYREAVASGRFQRMRRAA-YAVPE------ASAKLGRLRELVDEASESGLKV 577 Query: 72 IVAYHFNSDLARLQKAF--------PQGRTLDKDPCTIQEWNEGK-IPLLFAHPASCGHG 122 +V +F LA + +A + + ++ +L + + G G Sbjct: 578 VVFSYFREVLATVGEALGPDAFGPLSGSVAPARRQELVDAFSAVDGHAVLLSQIQAGGTG 637 Query: 123 LNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQ 182 LN+Q ++++ Q + R + G R V V+ L+A +++D+ +++ Sbjct: 638 LNMQ-AASVVILCEPQIKPTLEHQAVAR-----AHRMGQVRPVQVHRLLATDSVDQRLVE 691 Query: 183 RLRTKSTIQDL 193 L K + D Sbjct: 692 LLARKDRLFDA 702 >gi|83715974|ref|NP_001032909.1| chromodomain-helicase-DNA-binding protein 1-like [Bos taurus] gi|122139236|sp|Q3B7N1|CHD1L_BOVIN RecName: Full=Chromodomain-helicase-DNA-binding protein 1-like gi|78174364|gb|AAI07535.1| Chromodomain helicase DNA binding protein 1-like [Bos taurus] gi|296489521|gb|DAA31634.1| chromodomain-helicase-DNA-binding protein 1-like [Bos taurus] Length = 897 Score = 87.7 bits (216), Expect = 8e-16, Method: Composition-based stats. Identities = 36/217 (16%), Positives = 79/217 (36%), Gaps = 35/217 (16%) Query: 1 MKQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDE--------EKHWKEVH 52 MK F+ E + ++ N S+ KC + +D H E Sbjct: 297 MKDLDAFENET-----AKKVKLQNVLSQLRKC---VDHPYLFDGVEPEPFEIGDHLIE-A 347 Query: 53 DEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAFP---------QGRTLDKDPC-T 100 K+ L+ ++ + +++ L LQ G ++ Sbjct: 348 SGKLHLLDKLLAFLYSKGHRVLLFSQMTQMLDILQDYLDYRGYSYERVDGSVRGEERHLA 407 Query: 101 IQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 I+ + + I + G G+NL + ++FF ++ + Q R + G Sbjct: 408 IKNFGQQPIFTFLLSTRAGGVGMNLT-AADTVIFFDSDFNPQNDLQAAAR-----AHRIG 461 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 ++V V LI ++T++E+V ++ +K + + ++ Sbjct: 462 QNKSVKVIRLIGRDTVEEIVYRKAASKLQLTNTIIEG 498 >gi|302414008|ref|XP_003004836.1| chromodomain helicase hrp3 [Verticillium albo-atrum VaMs.102] gi|261355905|gb|EEY18333.1| chromodomain helicase hrp3 [Verticillium albo-atrum VaMs.102] Length = 1326 Score = 87.7 bits (216), Expect = 8e-16, Method: Composition-based stats. Identities = 33/174 (18%), Positives = 67/174 (38%), Gaps = 20/174 (11%) Query: 38 GAVYYDEEKHWKEVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQKAFP----QG 91 G+ +++ K+ L+ ++ K + +++ L L + Sbjct: 659 GSTRREDQVKGLIASSGKMMLLDQLLTKLKKDGHRVLIFSQMVKMLDILGDYLALRGYKF 718 Query: 92 RTLDKD------PCTIQEWNE--GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEE 143 + LD I +N + G G+NL + +V F W+ + Sbjct: 719 QRLDGTIAAGPRRMAINHFNAEGSDDFCFLLSTRAGGLGINLMT-ADTVVIFDSDWNPQA 777 Query: 144 HQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 Q + R + G K+ V +Y L+++ T++E VL+R R K ++ L + A Sbjct: 778 DLQAMGR-----AHRIGQKKPVSIYRLVSKETVEEEVLERARNKLLLEYLTIQA 826 >gi|68144413|gb|AAY86155.1| chromatin-remodelling complex ATPase ISWI2 [Chlamydomonas reinhardtii] Length = 1086 Score = 87.7 bits (216), Expect = 8e-16, Method: Composition-based stats. Identities = 37/220 (16%), Positives = 81/220 (36%), Gaps = 35/220 (15%) Query: 6 KFQRELYCDLQGENIEAFNSASKTVKCL----QL---ANGAVYYDE--------EKHWKE 50 + Q++ Y L ++++A N + K L QL N + Sbjct: 415 EMQKKWYAALLQKDVDALNGGADRAKLLNVVMQLRKCCNHPYLFQGAEPGPPFITGEHLV 474 Query: 51 VHDEKIKALEVIIEKANAA--PIIVAYHFNSDLARLQ---------KAFPQGRTLDK-DP 98 + K+ L+ ++ + +++ + L+ G T + Sbjct: 475 ENSGKLVLLDKLLPRLKERESRVLIFSQMTRMIDILEDYCLYRGYGYCRIDGNTDGEARD 534 Query: 99 CTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 I E+N + + G G+NL +I+V + W+ + Q ++R Sbjct: 535 NMIDEFNRPNSSKFIFLLSTRAGGLGINL-ATADIVVLYDSDWNPQMDLQAMDR-----A 588 Query: 157 RQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + G K+ V V+ +N+I+E V+++ K + L++ Sbjct: 589 HRIGQKKEVQVFRFCIENSIEEKVIEKAYKKLRLDALVIQ 628 >gi|330845768|ref|XP_003294743.1| hypothetical protein DICPUDRAFT_100046 [Dictyostelium purpureum] gi|325074740|gb|EGC28734.1| hypothetical protein DICPUDRAFT_100046 [Dictyostelium purpureum] Length = 1445 Score = 87.7 bits (216), Expect = 8e-16, Method: Composition-based stats. Identities = 31/163 (19%), Positives = 61/163 (37%), Gaps = 23/163 (14%) Query: 49 KEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQK--------------AFPQGRTL 94 + + D L ++ IV + S L+ ++ F T Sbjct: 1258 QLIQDLHTDMLND--KEKEDEKCIVFSQWTSMLSLIENIFIENGWKKNIHYSRFDGTLTS 1315 Query: 95 DKDPCTIQEWNEGKIP-LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGV 153 + +Q +N+ P ++ G GLNL N + WW++ Q I R+ Sbjct: 1316 VQRDRVLQAFNQDDGPRVMLMGLRCGGVGLNLTR-ANRVYLMDPWWNIALQNQAIGRV-- 1372 Query: 154 TRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + G K+ V+V I + +I+ +LQ +K + + + + Sbjct: 1373 ---HRMGQKKEVYVKNYIMEESIEIRILQLQESKEELAEAIFS 1412 >gi|302793538|ref|XP_002978534.1| hypothetical protein SELMODRAFT_443867 [Selaginella moellendorffii] gi|300153883|gb|EFJ20520.1| hypothetical protein SELMODRAFT_443867 [Selaginella moellendorffii] Length = 1858 Score = 87.7 bits (216), Expect = 8e-16, Method: Composition-based stats. Identities = 33/180 (18%), Positives = 60/180 (33%), Gaps = 32/180 (17%) Query: 44 EEKHWKEVHDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAFP------------ 89 E K + K+ + ++ + +V L ++ Sbjct: 1345 ESKRDVLENSGKMVLIMTLLSLNSSRGEKTLVFSQSLHTLDLIENFLDTIPLGGSQDVWN 1404 Query: 90 QGR---------TLDKDPCTIQEWNEGK---IPLLFAHPASCGHGLNLQYGGNILVFFSL 137 +GR T + +N+ I L + G N+ G N ++ Sbjct: 1405 KGREWLRLDGNTTASRRQQIADIFNDPNNTAIKCLLISTKAGSLGTNMT-GANRVIIVDG 1463 Query: 138 WWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 W+ Q + R + G + VFVY L+A T++E + R TK I +L+A Sbjct: 1464 SWNPTHDLQA-----LFRAWRYGQTKPVFVYRLLAYGTMEEKIYNRQLTKEGIAARVLDA 1518 >gi|255550546|ref|XP_002516323.1| ATP binding protein, putative [Ricinus communis] gi|223544553|gb|EEF46070.1| ATP binding protein, putative [Ricinus communis] Length = 1109 Score = 87.7 bits (216), Expect = 8e-16, Method: Composition-based stats. Identities = 30/189 (15%), Positives = 64/189 (33%), Gaps = 19/189 (10%) Query: 15 LQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKA--NAAPII 72 L+G + + A K E + + KI + +++ ++ Sbjct: 717 LEGMDFISPEDAGLAEKLALHVADVAEKAEFQEKHDNISCKISFIMSLLDNLIPEGHNVL 776 Query: 73 VAYHFNSDLARLQKAF---------PQGRTLDKDP-CTIQEWNEG-KIPLLFAHPASCGH 121 + L +Q + G T D + ++ EG P+ G Sbjct: 777 IFSQSRKMLNLIQDSLASNGYEFLRIDGTTKASDRVKIVNDFQEGVGAPIFLLTSQVGGL 836 Query: 122 GLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVL 181 GL L + ++ W+ Q ++R + G ++ V VY L+ T++E + Sbjct: 837 GLTLTK-ADRVIVVDPAWNPSTDNQSVDR-----AYRIGQRKDVLVYRLMTCGTVEEKIY 890 Query: 182 QRLRTKSTI 190 ++ K + Sbjct: 891 RKQIFKGGL 899 >gi|224001476|ref|XP_002290410.1| atpase-like protein [Thalassiosira pseudonana CCMP1335] gi|220973832|gb|EED92162.1| atpase-like protein [Thalassiosira pseudonana CCMP1335] Length = 873 Score = 87.7 bits (216), Expect = 8e-16, Method: Composition-based stats. Identities = 21/141 (14%), Positives = 53/141 (37%), Gaps = 18/141 (12%) Query: 68 AAPIIVAYHFNSDLARLQKAFPQGRTL----------DKDPCTIQEWNEG--KIPLLFAH 115 + +++ L ++ +K ++E+N Sbjct: 325 GSRVLIFSQMTRVLDIMEDYLRLVGHEYCRIDGNTDGEKRDSQMEEFNAPGSSKFCFLLS 384 Query: 116 PASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNT 175 + G G+NL +I++ F W+ + Q ++R + G + V V+ I++ T Sbjct: 385 TRAGGLGINL-ATADIVILFDSDWNPQVDLQAMDR-----AHRIGQTKPVQVFRFISEGT 438 Query: 176 IDELVLQRLRTKSTIQDLLLN 196 ++E +++R K + ++ Sbjct: 439 VEEKIIERADKKLFLDAAVIQ 459 >gi|150865976|ref|XP_001385416.2| nucleotide excision repair protein [Scheffersomyces stipitis CBS 6054] gi|149387232|gb|ABN67387.2| nucleotide excision repair protein [Scheffersomyces stipitis CBS 6054] Length = 701 Score = 87.7 bits (216), Expect = 8e-16, Method: Composition-based stats. Identities = 25/167 (14%), Positives = 57/167 (34%), Gaps = 23/167 (13%) Query: 45 EKHWKEVHDEKIKALEV----IIEKANAAPIIVAYHFNSDLARLQKAFPQG--------- 91 W+ KI+AL + + IV F S L ++ + Sbjct: 523 GGEWR--SSTKIEALVEELYKLRSDKHTIKSIVFSQFTSMLDLIEWRLKRAGFQTVKLQG 580 Query: 92 --RTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIE 149 +D + ++ + + G LNL + + WW+ Q ++ Sbjct: 581 SMSPQQRDNTIKYFMDNTEVEVFLVSLKAGGVALNLCE-ASQVFLMDPWWNPSVEWQSMD 639 Query: 150 RIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 R+ + G KR + + +++I+ +++ K+ + +N Sbjct: 640 RV-----HRIGQKRPIRITRFCIEDSIEMKIIELQEKKANMIHATIN 681 >gi|73986610|ref|XP_867743.1| PREDICTED: similar to SWI/SNF-related matrix-associated actin-dependent regulator of chromatin a4 isoform 9 [Canis familiaris] Length = 1601 Score = 87.7 bits (216), Expect = 8e-16, Method: Composition-based stats. Identities = 34/187 (18%), Positives = 72/187 (38%), Gaps = 25/187 (13%) Query: 29 TVKCLQLANGAVYYDEEKHWKEVH----DEKIKALEVIIE--KANAAPIIVAYHFNSDLA 82 ++ ++ N Y D K++ K + L+ I+ +A +++ S + Sbjct: 1039 IMQLRKICNHP-YMDVGGMEKQLDLYRASGKFELLDRILPKLRATNHKVLLFCQMTSLMT 1097 Query: 83 RLQKAF---------PQGRTLDKDPCTI-QEWNEG--KIPLLFAHPASCGHGLNLQYGGN 130 ++ F G T +D + + +NE + + + G GLNLQ + Sbjct: 1098 IMEDYFAYRGFKYLRLDGTTKAEDRGMLLKTFNEPGSEYFIFLLSTRAGGLGLNLQ-SAD 1156 Query: 131 ILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 ++ F W+ + Q R + G + V V L N+++E +L + K + Sbjct: 1157 TVIIFDSDWNPHQDLQA-----QDRAHRIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNV 1211 Query: 191 QDLLLNA 197 ++ A Sbjct: 1212 DQKVIQA 1218 >gi|118343651|ref|NP_001071646.1| chromo-helicase DNA-binding protein [Taeniopygia guttata] gi|28975391|gb|AAO61781.1| chromo-helicase DNA-binding protein [Taeniopygia guttata] gi|28975393|gb|AAO61782.1| chromo-helicase DNA-binding protein [Taeniopygia guttata] Length = 1786 Score = 87.7 bits (216), Expect = 8e-16, Method: Composition-based stats. Identities = 27/153 (17%), Positives = 56/153 (36%), Gaps = 21/153 (13%) Query: 68 AAPIIVAYHFNSDLARLQKAFP---------QGRTLDK-DPCTIQEWN-EGKIPL-LFAH 115 +++ L L + G + + +N EG Sbjct: 786 GNRVLIFSQMVRMLDILAEYLKYRQFPFQRLDGSIKGELRKQALDHFNAEGSEDFCFLLS 845 Query: 116 PASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNT 175 + G G+NL + +V F W+ + Q R + G K+ V +Y L+ + + Sbjct: 846 TRAGGLGINL-ASADTVVIFDSDWNPQNDLQAQAR-----AHRIGQKKQVNIYRLVTKAS 899 Query: 176 IDELVLQRLRTKSTIQDLL---LNALKKETIHV 205 ++E +L+R + K + L+ ++ K +H Sbjct: 900 VEEDILERAKKKMVLDHLVIQRMDTTGKTVLHT 932 >gi|320032369|gb|EFW14322.1| SNF2 family helicase/ATPase [Coccidioides posadasii str. Silveira] Length = 1132 Score = 87.7 bits (216), Expect = 8e-16, Method: Composition-based stats. Identities = 30/162 (18%), Positives = 68/162 (41%), Gaps = 19/162 (11%) Query: 46 KHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFP---------QGRTL 94 K+ + ++ K++ L ++++ N I++ F + L++ G T Sbjct: 921 KNDEWMNSGKVEKLCELLKQYTENGDRILIFSQFTMVVDILEQVLETLEIRFFRLDGTTS 980 Query: 95 DKDPCTIQE--WNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIG 152 +D +I + + + +P+ + G G+NL N ++ F ++ ++ Q Sbjct: 981 VEDRQSILDAFYEQVDVPVFMLSTKAGGAGINL-ACANKVIIFDSSFNPQDDIQA----- 1034 Query: 153 VTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 R + G R V V L+ + TI+E + +TK + + Sbjct: 1035 ENRAHRVGQTREVEVVRLVTKGTIEEQIYALGQTKLVLDQRV 1076 >gi|257484419|ref|ZP_05638460.1| helicase/SNF2 domain-containing protein [Pseudomonas syringae pv. tabaci ATCC 11528] Length = 600 Score = 87.7 bits (216), Expect = 8e-16, Method: Composition-based stats. Identities = 26/120 (21%), Positives = 50/120 (41%), Gaps = 15/120 (12%) Query: 29 TVKCLQLANGA--VYYDEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARL 84 +K Q+ V D + K+ K+ +L + E+ A I++ F S L+ + Sbjct: 483 LLKLRQVCCDLRLVNQDMPVNSKQGTSGKLNSLMEMFEELLAEGRKILLFSQFTSMLSLI 542 Query: 85 QKAFPQ---------GRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFF 135 ++ Q G T D+ I ++ GK+P+ + G GLNL + ++ + Sbjct: 543 EEELKQRGIAYALLTGSTRDRR-TPIHDFQSGKLPIFLISLKAGGTGLNLT-AADTVIHY 600 >gi|170077237|ref|YP_001733875.1| SNF2 helicase, putative [Synechococcus sp. PCC 7002] gi|169884906|gb|ACA98619.1| SNF2 helicase, putative [Synechococcus sp. PCC 7002] Length = 1002 Score = 87.7 bits (216), Expect = 8e-16, Method: Composition-based stats. Identities = 22/113 (19%), Positives = 45/113 (39%), Gaps = 9/113 (7%) Query: 87 AFPQGRTLDKDPCTI--QEWNEGK-IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEE 143 F G T + + + N+ P+ + G GLNL N + WW+ Sbjct: 868 LFLYGATRRETRQQMCDRFQNDPNGPPIFILSLKAGGTGLNLTR-ANHVFHVDRWWNPAV 926 Query: 144 HQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 Q +R + G K+ V V+ ++ T++E + + +K + + ++ Sbjct: 927 EDQATDR-----AFRIGQKQNVQVHKFVSTGTLEEKISAMIASKKELAEQTVD 974 >gi|197251949|ref|NP_075222.2| chromodomain-helicase-DNA-binding protein 8 [Rattus norvegicus] gi|226706290|sp|Q9JIX5|CHD8_RAT RecName: Full=Chromodomain-helicase-DNA-binding protein 8; Short=CHD-8; AltName: Full=ATP-dependent helicase CHD8; AltName: Full=Axis duplication inhibitor; Short=Duplin gi|149033674|gb|EDL88472.1| chromodomain helicase DNA binding protein 8, isoform CRA_a [Rattus norvegicus] Length = 2581 Score = 87.7 bits (216), Expect = 8e-16, Method: Composition-based stats. Identities = 26/146 (17%), Positives = 52/146 (35%), Gaps = 18/146 (12%) Query: 65 KANAAPIIVAYHFNSDLARLQKAFPQGRTL----------DKDPCTIQEWNEGKIP--LL 112 KA +++ L L+ Q R L + I +++ + Sbjct: 1146 KAGGHKVLIFSQMVRCLDILEDYLIQRRYLYERIDGRVRGNLRQAAIDRFSKPDSDRFVF 1205 Query: 113 FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIA 172 + G G+NL + + F W+ + Q R + G +AV VY LI Sbjct: 1206 LLCTRAGGLGINLT-AADTCIIFDSDWNPQNDLQAQARC-----HRIGQSKAVKVYRLIT 1259 Query: 173 QNTIDELVLQRLRTKSTIQDLLLNAL 198 +N+ + + + K + +L ++ Sbjct: 1260 RNSYEREMFDKASLKLGLDKAVLQSM 1285 >gi|330793226|ref|XP_003284686.1| hypothetical protein DICPUDRAFT_53111 [Dictyostelium purpureum] gi|325085384|gb|EGC38792.1| hypothetical protein DICPUDRAFT_53111 [Dictyostelium purpureum] Length = 2666 Score = 87.7 bits (216), Expect = 8e-16, Method: Composition-based stats. Identities = 27/168 (16%), Positives = 59/168 (35%), Gaps = 20/168 (11%) Query: 43 DEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAF---------PQG 91 DE K+ ++ ++++ A +++ L L+ G Sbjct: 972 DELGELLVRSSSKLVLVDKLLQRLKAEGHQVLIFSQMVESLNILEDYLQYREYTYERLDG 1031 Query: 92 RTLDKDPCT-IQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMI 148 + I + + + + + G G+NL + ++ F W+ + Q Sbjct: 1032 SIKSEVRQASIDRFQDKEANRFVFLLSTRAGGVGINLTT-ADTVILFDSDWNPQSDLQAQ 1090 Query: 149 ERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 R + G V VY LI +NT +E + + K + ++L+ Sbjct: 1091 ARC-----HRIGQTNNVKVYRLITRNTYEEYLFECATKKLLLDHIVLS 1133 >gi|321468014|gb|EFX79001.1| hypothetical protein DAPPUDRAFT_319936 [Daphnia pulex] Length = 547 Score = 87.7 bits (216), Expect = 8e-16, Method: Composition-based stats. Identities = 33/185 (17%), Positives = 69/185 (37%), Gaps = 31/185 (16%) Query: 42 YDEEKHWKEVHDEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQKAF-----PQGRTL 94 +E+ K H KI L I+ ++V + L +++ +T Sbjct: 274 VSDEEINKIDHGGKILLLMDILRHCEKIGEKLLVFSQSLAALDLIEEFLANNASEVSKTW 333 Query: 95 DKDPCTIQ---------------EWNEGKIP---LLFAHPASCGHGLNLQYGGNILVFFS 136 + + + +N+ K P + G G+NL G N ++ F Sbjct: 334 NLNKDYFRMDGSTKPEKRLEWGTAFNDPKNPRARFFLTSTKAGGIGINL-KGANRVIIFD 392 Query: 137 LWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + W+ +Q + R + G + +VY +AQ T++E++ R K + +++ Sbjct: 393 VSWNPSVDEQSV-----FRAYRLGQHKPCYVYRFVAQGTMEEIMYYRQVEKLALSRRIVD 447 Query: 197 ALKKE 201 + E Sbjct: 448 GEQTE 452 >gi|195128581|ref|XP_002008741.1| GI13663 [Drosophila mojavensis] gi|193920350|gb|EDW19217.1| GI13663 [Drosophila mojavensis] Length = 1992 Score = 87.7 bits (216), Expect = 8e-16, Method: Composition-based stats. Identities = 23/150 (15%), Positives = 54/150 (36%), Gaps = 20/150 (13%) Query: 55 KIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFP----QGRTLDK------DPCTIQ 102 K+ L ++++ A +++ L L+ + +D I Sbjct: 1044 KLVLLSKMLKQLKAQGHRVLIFSQMTKMLDILEDFLEGEQYKYERIDGSITGTVRQEAID 1103 Query: 103 EWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 +N + + + G G+NL + ++ + W+ Q +R + G Sbjct: 1104 RFNAPGAQQFVFLLSTRAGGLGINL-ATADTVIIYDSDWNPHNDIQA-----FSRAHRIG 1157 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 V +Y + +N+++E V Q + K + Sbjct: 1158 QANKVMIYRFVTRNSVEERVTQVAKRKMML 1187 >gi|38233941|ref|NP_939708.1| hypothetical protein DIP1355 [Corynebacterium diphtheriae NCTC 13129] gi|38200202|emb|CAE49883.1| Conserved hypothetical protein [Corynebacterium diphtheriae] Length = 884 Score = 87.7 bits (216), Expect = 8e-16, Method: Composition-based stats. Identities = 33/149 (22%), Positives = 58/149 (38%), Gaps = 16/149 (10%) Query: 54 EKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQKAFPQ--------GRTLDKDPCTIQE 103 K++ L I+++A +I+ +F S L R++K + + I E Sbjct: 704 AKMERLIDIVKEAESAGKNVIIFSYFRSVLERIEKDLGEYVAGSITADVPPQRRQQLIDE 763 Query: 104 WNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKR 163 +L + G GLN+Q ++++F Q I R + G + Sbjct: 764 LGNTGRHVLLLQIVAGGVGLNIQK-ASVVIFTEAQVKPTLVDQAIAR-----AHRMGQRD 817 Query: 164 AVFVYYLIAQNTIDELVLQRLRTKSTIQD 192 V VY L +T+DE + L K + D Sbjct: 818 PVTVYRLFGADTVDERLTALLEHKRAVFD 846 >gi|320164497|gb|EFW41396.1| stretch responsive protein 278 [Capsaspora owczarzaki ATCC 30864] Length = 958 Score = 87.7 bits (216), Expect = 8e-16, Method: Composition-based stats. Identities = 30/158 (18%), Positives = 60/158 (37%), Gaps = 18/158 (11%) Query: 51 VHDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQK---------AFPQGRTLDKDPC 99 K+K L +++ +AN +++ L ++K + + Sbjct: 715 DTSGKLKILLTLLQYYEANGDKVLIFCSSTRMLRIIEKIVMPRYNYLLLDGATSAMQRQV 774 Query: 100 TIQEWNEGKIP-LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQ 158 + ++ + K L + G GLNL N+++ F W+ Q R + Sbjct: 775 LVDKFQQDKSKFLFLISTRAGGVGLNLT-AANVVIVFDPSWNPASDMQA-----QDRAFR 828 Query: 159 AGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 G R V V L++Q +I+E + R K + ++ L Sbjct: 829 IGQLRDVAVNRLMSQASIEEQIYGRQVYKQHLGNMALE 866 >gi|320032522|gb|EFW14475.1| DNA repair protein RAD16 [Coccidioides posadasii str. Silveira] Length = 945 Score = 87.7 bits (216), Expect = 8e-16, Method: Composition-based stats. Identities = 30/168 (17%), Positives = 58/168 (34%), Gaps = 21/168 (12%) Query: 51 VHDEKIKALE----VIIEKANAAPIIVAYHFNSDLA----RLQKAFPQGRTLDKDPCTIQ 102 KI+ L + K IV F S L RL +A LD +Q Sbjct: 769 TSSTKIEMLVYDLYKLRSKKQTHKSIVFSQFTSMLQLVEWRLHRAGISTVMLDGSMTPVQ 828 Query: 103 EW-------NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTR 155 N ++ + + G LNL + + WW+ Q +R Sbjct: 829 RQKSIDYFMNNVEVEVFLVSLKAGGVALNLTEASRVFI-VDPWWNPAAEWQSADRC---- 883 Query: 156 QRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETI 203 + G +R + L +++++ ++ K+ + + +N + E + Sbjct: 884 -HRIGQRRPCVITKLCIEDSVESRMVLLQEKKANMINGTINKDQSEAL 930 >gi|154310570|ref|XP_001554616.1| hypothetical protein BC1G_06759 [Botryotinia fuckeliana B05.10] gi|150851299|gb|EDN26492.1| hypothetical protein BC1G_06759 [Botryotinia fuckeliana B05.10] Length = 1142 Score = 87.7 bits (216), Expect = 8e-16, Method: Composition-based stats. Identities = 28/152 (18%), Positives = 55/152 (36%), Gaps = 17/152 (11%) Query: 54 EKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRT----------LDKDPCTIQE 103 + L+ I +++ + +V F S L+ ++ A + + Sbjct: 976 ALLSNLKSIRKESPSMKSVVFSQFTSFLSLIEPALARSSIPFLRLDGSMPQKARAAVLAR 1035 Query: 104 W-NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFK 162 + + G+ +L + G GLNL + WW Q I+R+ + G Sbjct: 1036 YKDSGEGIVLLLSLRAGGVGLNLTM-AKRVFMMDPWWSFAVEAQAIDRV-----HRMGQV 1089 Query: 163 RAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 V V I + +++E +L+ K I L Sbjct: 1090 GEVVVKRFIVKGSVEERMLRVQERKKFIASSL 1121 >gi|156096356|ref|XP_001614212.1| hypothetical protein [Plasmodium vivax SaI-1] gi|148803086|gb|EDL44485.1| hypothetical protein, conserved [Plasmodium vivax] Length = 1529 Score = 87.7 bits (216), Expect = 8e-16, Method: Composition-based stats. Identities = 37/180 (20%), Positives = 64/180 (35%), Gaps = 41/180 (22%) Query: 51 VHDEKIKALEVII--EKANAAPIIVAYHFNSDLARLQKAFP---------QGRTLDKDPC 99 V+ K+K L I + N I+V + L +QK G ++ Sbjct: 1322 VYSTKLKQLFDHIQNDMQNELHIVVFSQWIGFLKIIQKLLTLHNIPNKIYDGSLTYEERK 1381 Query: 100 TIQEW---NEGKI---------------------PLLFAHPASCGHGLNLQYGGNILVFF 135 T W GK+ +L + G GLNL + + Sbjct: 1382 TTLFWFNVQRGKVYQPGIGFTTPSSPIAVENFAGKVLLCSLKAGGVGLNLTVS-SKVYLM 1440 Query: 136 SLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 LWW+ Q ER+ + G + V +Y + + T++E +LQ ++K + +L Sbjct: 1441 DLWWNPAIEDQAFERV-----HRIGQLKDVSIYKFVLEKTVEERILQIHQSKQYTANQIL 1495 >gi|121711213|ref|XP_001273222.1| DNA excision repair protein Rad16, putative [Aspergillus clavatus NRRL 1] gi|119401373|gb|EAW11796.1| DNA excision repair protein Rad16, putative [Aspergillus clavatus NRRL 1] Length = 842 Score = 87.7 bits (216), Expect = 8e-16, Method: Composition-based stats. Identities = 31/168 (18%), Positives = 57/168 (33%), Gaps = 21/168 (12%) Query: 51 VHDEKIKALE----VIIEKANAAPIIVAYHFNSDLA----RLQKAFPQGRTLDKDPCTIQ 102 KI+ L + K IV F S L RL++A LD Q Sbjct: 666 TSSTKIEMLVYELYKLRSKKQTHKSIVFSQFTSMLQLVEWRLRRAGFNTVMLDGTMTPAQ 725 Query: 103 EW-------NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTR 155 N + + + G LNL + + WW+ Q +R Sbjct: 726 RQRSIDHFMNNVDVEVFLVSLKAGGVALNLTEASRVFI-VDPWWNPAAEWQSADRC---- 780 Query: 156 QRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETI 203 + G +R + L +++++ ++ K+ + + LN + E + Sbjct: 781 -HRIGQRRPCVITRLCIEDSVESRIVLLQEKKANLINGTLNKDQGEAL 827 >gi|119176940|ref|XP_001240322.1| hypothetical protein CIMG_07485 [Coccidioides immitis RS] gi|303316255|ref|XP_003068132.1| DNA repair protein RAD16, putative [Coccidioides posadasii C735 delta SOWgp] gi|240107808|gb|EER25987.1| DNA repair protein RAD16, putative [Coccidioides posadasii C735 delta SOWgp] Length = 927 Score = 87.7 bits (216), Expect = 8e-16, Method: Composition-based stats. Identities = 30/168 (17%), Positives = 58/168 (34%), Gaps = 21/168 (12%) Query: 51 VHDEKIKALE----VIIEKANAAPIIVAYHFNSDLA----RLQKAFPQGRTLDKDPCTIQ 102 KI+ L + K IV F S L RL +A LD +Q Sbjct: 751 TSSTKIEMLVYDLYKLRSKKQTHKSIVFSQFTSMLQLVEWRLHRAGISTVMLDGSMTPVQ 810 Query: 103 EW-------NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTR 155 N ++ + + G LNL + + WW+ Q +R Sbjct: 811 RQKSIDYFMNNVEVEVFLVSLKAGGVALNLTEASRVFI-VDPWWNPAAEWQSADRC---- 865 Query: 156 QRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETI 203 + G +R + L +++++ ++ K+ + + +N + E + Sbjct: 866 -HRIGQRRPCVITKLCIEDSVESRMVLLQEKKANMINGTINKDQSEAL 912 >gi|34328020|dbj|BAB13390.3| KIAA1564 protein [Homo sapiens] Length = 2432 Score = 87.7 bits (216), Expect = 8e-16, Method: Composition-based stats. Identities = 29/177 (16%), Positives = 62/177 (35%), Gaps = 20/177 (11%) Query: 36 ANGAVYYDEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRT 93 A + +D K+ ++ ++ K A +++ L L+ Q R Sbjct: 966 ACHIIPHDFHLQAMVRSAGKLVLIDKLLPKLKAGGHKVLIFSQMVRCLDILEDYLIQRRY 1025 Query: 94 L----------DKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDL 141 L + I +++ + + G G+NL + + F W+ Sbjct: 1026 LYERIDGRVRGNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLT-AADTCIIFDSDWNP 1084 Query: 142 EEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNAL 198 + Q R + G +AV VY LI +N+ + + + K + +L ++ Sbjct: 1085 QNDLQAQARC-----HRIGQSKAVKVYRLITRNSYEREMFDKASLKLGLDKAVLQSM 1136 >gi|299115203|emb|CBN74034.1| conserved unknown protein [Ectocarpus siliculosus] Length = 1524 Score = 87.7 bits (216), Expect = 8e-16, Method: Composition-based stats. Identities = 26/174 (14%), Positives = 59/174 (33%), Gaps = 26/174 (14%) Query: 45 EKHWKEVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQKAFP------------- 89 K H K+ L+ ++ + +++ F L L+ Sbjct: 730 SKEHLVKHSGKLVLLDKLLPRLKTQGHRVLLFSQFKIMLDILEDYLIASDISYGRIDGDI 789 Query: 90 QGRTLDKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQM 147 QGR K+ I + ++ + G G+ L + + + W+ + Q Sbjct: 790 QGRQRQKE---IDSFQAPDSDMLVMLLSTRAGGVGITLT-AADTCIIYDSDWNPQNDVQA 845 Query: 148 IERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 R + G ++V VY L+ T + + + K + + +L+ + + Sbjct: 846 QARC-----HRIGQTKSVKVYRLLVAKTYETHMFKTASRKLGLDEAVLSGTRPQ 894 >gi|56203112|emb|CAI19451.1| chromodomain helicase DNA binding protein 5 [Homo sapiens] gi|56417881|emb|CAI19894.1| chromodomain helicase DNA binding protein 5 [Homo sapiens] Length = 1195 Score = 87.7 bits (216), Expect = 8e-16, Method: Composition-based stats. Identities = 22/160 (13%), Positives = 54/160 (33%), Gaps = 20/160 (12%) Query: 45 EKHWKEVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQ----------KAFPQGR 92 + K+ L+ +++K +++ L L+ + G Sbjct: 531 DGSSLVKSSGKLMLLQKMLKKLRDEGHRVLIFSQMTKMLDLLEDFLEYEGYKYERIDGGI 590 Query: 93 TLDKDPCTIQEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 T I +N + + G G+NL + ++ + W+ Q Sbjct: 591 TGGLRQEAIDRFNAPGAQQFCFLLSTRAGGLGINL-ATADTVIIYDSDWNPHNDIQA--- 646 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 +R + G + V +Y + + +++E + Q + K + Sbjct: 647 --FSRAHRIGQNKKVMIYRFVTRASVEERITQVAKRKMML 684 >gi|281340559|gb|EFB16143.1| hypothetical protein PANDA_017702 [Ailuropoda melanoleuca] Length = 2448 Score = 87.7 bits (216), Expect = 9e-16, Method: Composition-based stats. Identities = 29/177 (16%), Positives = 62/177 (35%), Gaps = 20/177 (11%) Query: 36 ANGAVYYDEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRT 93 A + +D K+ ++ ++ K A +++ L L+ Q R Sbjct: 980 ACHIIPHDFHLQAMVRSAGKLVLIDKLLPKLKAGGHKVLIFSQMVRCLDILEDYLIQRRY 1039 Query: 94 L----------DKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDL 141 L + I +++ + + G G+NL + + F W+ Sbjct: 1040 LYERIDGRVRGNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLT-AADTCIIFDSDWNP 1098 Query: 142 EEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNAL 198 + Q R + G +AV VY LI +N+ + + + K + +L ++ Sbjct: 1099 QNDLQAQARC-----HRIGQSKAVKVYRLITRNSYEREMFDKASLKLGLDKAVLQSM 1150 >gi|255077387|ref|XP_002502335.1| SNF2 super family [Micromonas sp. RCC299] gi|226517600|gb|ACO63593.1| SNF2 super family [Micromonas sp. RCC299] Length = 712 Score = 87.7 bits (216), Expect = 9e-16, Method: Composition-based stats. Identities = 19/142 (13%), Positives = 51/142 (35%), Gaps = 17/142 (11%) Query: 65 KANAAPIIVAYHFNSDLARLQKAFPQGRTL----------DKDPCTIQEWN-EGKIPLLF 113 + ++ L ++ Q + + E+N + + Sbjct: 479 RDKGHKTLIFSQMTKMLDLIESYLEQKGQKVCRIDGSVQWQERKKQMDEFNTNPEYGVFL 538 Query: 114 AHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQ 173 + G G+NL + ++ + W+ + Q ++R + G + V V L Sbjct: 539 LSTRAGGLGINLT-AADTVIIYDSDWNPHQDMQAMDRC-----HRIGQTKPVHVLRLATA 592 Query: 174 NTIDELVLQRLRTKSTIQDLLL 195 ++++ +L R +K ++ L++ Sbjct: 593 HSVEGKMLSRANSKLALEKLVI 614 >gi|326477312|gb|EGE01322.1| DNA repair protein RAD16 [Trichophyton equinum CBS 127.97] Length = 947 Score = 87.7 bits (216), Expect = 9e-16, Method: Composition-based stats. Identities = 29/168 (17%), Positives = 56/168 (33%), Gaps = 21/168 (12%) Query: 51 VHDEKIKALE-VIIEKANAA---PIIVAYHFNSDLA----RLQKAFPQGRTLDKDPCTIQ 102 KI+ L + + N IV F S L RL +A LD +Q Sbjct: 771 TSSTKIEMLVFDLCQLRNKKRTNKSIVFSQFTSMLQLVEWRLHRAGISTVMLDGSMSPVQ 830 Query: 103 EW-------NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTR 155 + + G LNL + + WW+ Q +R Sbjct: 831 RQRSIDYFMQNVDTEVFLVSLKAGGVALNLTEASRVFI-VDPWWNPAAEWQSADRC---- 885 Query: 156 QRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETI 203 + G +R + L +++++ ++ K+ + + +N + E + Sbjct: 886 -HRIGQRRPCVITRLCIEDSVESRMVLLQEKKANMINGTINKDQSEAL 932 >gi|326472991|gb|EGD97000.1| DNA repair protein RAD16 [Trichophyton tonsurans CBS 112818] Length = 947 Score = 87.7 bits (216), Expect = 9e-16, Method: Composition-based stats. Identities = 29/168 (17%), Positives = 56/168 (33%), Gaps = 21/168 (12%) Query: 51 VHDEKIKALE-VIIEKANAA---PIIVAYHFNSDLA----RLQKAFPQGRTLDKDPCTIQ 102 KI+ L + + N IV F S L RL +A LD +Q Sbjct: 771 TSSTKIEMLVFDLCQLRNKKRTNKSIVFSQFTSMLQLVEWRLHRAGISTVMLDGSMSPVQ 830 Query: 103 EW-------NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTR 155 + + G LNL + + WW+ Q +R Sbjct: 831 RQRSIDYFMQNVDTEVFLVSLKAGGVALNLTEASRVFI-VDPWWNPAAEWQSADRC---- 885 Query: 156 QRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETI 203 + G +R + L +++++ ++ K+ + + +N + E + Sbjct: 886 -HRIGQRRPCVITRLCIEDSVESRMVLLQEKKANMINGTINKDQSEAL 932 >gi|302830624|ref|XP_002946878.1| hypothetical protein VOLCADRAFT_120343 [Volvox carteri f. nagariensis] gi|300267922|gb|EFJ52104.1| hypothetical protein VOLCADRAFT_120343 [Volvox carteri f. nagariensis] Length = 2539 Score = 87.7 bits (216), Expect = 9e-16, Method: Composition-based stats. Identities = 21/116 (18%), Positives = 44/116 (37%), Gaps = 14/116 (12%) Query: 77 FNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVF 134 F RL + P ++ +N + P + G G+NL + ++ Sbjct: 904 FTH--QRLDGSTPAA----ARHAAMEHFNRPESPDFAFLLSTRAGGLGINL-ATADTVII 956 Query: 135 FSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 F W+ + Q + R + G V +Y + +++E +L+R + K + Sbjct: 957 FDSDWNPQNDLQAMSR-----AHRIGQTETVNIYRFVTSGSVEEDILERAKRKMVL 1007 >gi|297479287|ref|XP_002690695.1| PREDICTED: chromodomain helicase DNA binding protein 8 [Bos taurus] gi|296483394|gb|DAA25509.1| chromodomain helicase DNA binding protein 8 [Bos taurus] Length = 2540 Score = 87.7 bits (216), Expect = 9e-16, Method: Composition-based stats. Identities = 29/177 (16%), Positives = 62/177 (35%), Gaps = 20/177 (11%) Query: 36 ANGAVYYDEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRT 93 A + +D K+ ++ ++ K A +++ L L+ Q R Sbjct: 1072 ACHIIPHDFHLQAMVRSAGKLVLIDKLLPKLKAGGHKVLIFSQMVRCLDILEDYLIQRRY 1131 Query: 94 L----------DKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDL 141 L + I +++ + + G G+NL + + F W+ Sbjct: 1132 LYERIDGRVRGNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLT-AADTCIIFDSDWNP 1190 Query: 142 EEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNAL 198 + Q R + G +AV VY LI +N+ + + + K + +L ++ Sbjct: 1191 QNDLQAQARC-----HRIGQSKAVKVYRLITRNSYEREMFDKASLKLGLDKAVLQSM 1242 >gi|289613152|emb|CBI59746.1| unnamed protein product [Sordaria macrospora] Length = 1171 Score = 87.7 bits (216), Expect = 9e-16, Method: Composition-based stats. Identities = 29/136 (21%), Positives = 50/136 (36%), Gaps = 17/136 (12%) Query: 68 AAPIIVAYHFNSDLARLQKAF----------PQGRTLDKDPCTIQEWN-EGKIPLLFAHP 116 ++V H L LQ F + ++ + E+N + + + Sbjct: 606 GDKVLVFSHSVRLLRILQHLFHNTSYNVSFLDGALSYEERQRVVDEFNTDPRQFVFLIST 665 Query: 117 ASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTI 176 + G GLN+ N +V F W+ Q R + G R V V+ L++ TI Sbjct: 666 KAGGVGLNIT-SANKVVIFDPHWNPSYDLQA-----QDRAYRIGQIRDVDVFRLVSAGTI 719 Query: 177 DELVLQRLRTKSTIQD 192 +E+V R K + Sbjct: 720 EEIVYARQIYKQQQAN 735 >gi|225557865|gb|EEH06150.1| DNA repair and recombination protein RAD5B [Ajellomyces capsulatus G186AR] Length = 928 Score = 87.7 bits (216), Expect = 9e-16, Method: Composition-based stats. Identities = 36/163 (22%), Positives = 65/163 (39%), Gaps = 20/163 (12%) Query: 42 YDEEKHWKEVHDEKIKALEVIIEKANAAP---IIVAYHFNSDLARLQKAFP--------- 89 +E E KI+AL I++ AP +V + S L ++ Sbjct: 744 TNEIDIDSETTSSKIQALLKILKAKGQAPNTKTVVFSQWVSFLDIVESQLVRNGITFARI 803 Query: 90 --QGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQM 147 + + +D N+ +L A C GLNL N ++ WW Q Sbjct: 804 DGKMSSAKRDAAMNALSNDSNCTVLLASLNVCSVGLNL-VAANQVILADSWWAPAIEDQA 862 Query: 148 IERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 ++R+ + G KR ++ L+ +N+I++ VL + + K T+ Sbjct: 863 VDRV-----YRLGQKRPTTIWRLVMENSIEDRVLDKQKEKRTL 900 >gi|194036340|ref|XP_001928553.1| PREDICTED: chromodomain-helicase-DNA-binding protein 1-like [Sus scrofa] Length = 901 Score = 87.7 bits (216), Expect = 9e-16, Method: Composition-based stats. Identities = 34/219 (15%), Positives = 81/219 (36%), Gaps = 35/219 (15%) Query: 1 MKQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDE--------EKHWKEVH 52 MK F+ E+ + ++ N S+ KC + +D H E Sbjct: 297 MKDLDAFENEM-----AKKVKLQNVLSQLRKC---VDHPYLFDGVEPEPFEIGDHLIE-A 347 Query: 53 DEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAFP---------QGRTLDKDPC-T 100 K+ L+ ++ + +++ L LQ G ++ Sbjct: 348 SGKLHLLDKLLAFLYSKGHRVLLFSQMTQMLDILQDYMDYRGYSYERVDGSVRGEERHLA 407 Query: 101 IQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 I+ + + I + + G G+NL + ++F ++ + Q R + G Sbjct: 408 IKNFGQQPIFIFLLSTRAGGVGMNLT-AADTVIFVDSDFNPQNDLQAAAR-----AHRIG 461 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 ++V V LI ++T++E++ ++ +K + + ++ + Sbjct: 462 QNKSVKVIRLIGRDTVEEIICRKAASKLKLTNTIIEGGR 500 >gi|317034188|ref|XP_001396165.2| DNA repair protein RAD16 [Aspergillus niger CBS 513.88] Length = 652 Score = 87.7 bits (216), Expect = 9e-16, Method: Composition-based stats. Identities = 26/143 (18%), Positives = 51/143 (35%), Gaps = 17/143 (11%) Query: 72 IVAYHFNSDLA----RLQKAFPQGRTLDKDPCTIQEWN-------EGKIPLLFAHPASCG 120 IV F S L RL++A LD Q N + + + G Sbjct: 501 IVFSQFTSMLQLVEWRLRRAGFNTVMLDGTMTPAQRQNSIEYFMNNVDVEVFLVSLKAGG 560 Query: 121 HGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELV 180 LNL + + WW+ Q +R + G +R + L +++++ + Sbjct: 561 VALNLTEASRVFI-VDPWWNPAAEWQSADRC-----HRIGQRRPCVITRLCIEDSVESRI 614 Query: 181 LQRLRTKSTIQDLLLNALKKETI 203 + K+ + + +N + E + Sbjct: 615 VLLQEKKANLINGTINKDQGEAL 637 >gi|158300708|ref|XP_552266.3| AGAP011966-PA [Anopheles gambiae str. PEST] gi|157013291|gb|EAL38818.3| AGAP011966-PA [Anopheles gambiae str. PEST] Length = 1082 Score = 87.7 bits (216), Expect = 9e-16, Method: Composition-based stats. Identities = 32/164 (19%), Positives = 61/164 (37%), Gaps = 21/164 (12%) Query: 49 KEVHDEKIKALEVIIEK---ANAAPIIVAYHFNSDLARLQKAFPQ---------GRTLDK 96 E KI+ ++E+ I+ + S L L + G+ K Sbjct: 906 IERPSSKIEKTMQLLEEKIFHTDDKAIIVSQWTSMLDILATHLSERNVPFVSLTGKVQVK 965 Query: 97 DPCTIQ-EWN--EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGV 153 I ++N GK ++ + G GLNL G N L+ W+ + Q +R+ Sbjct: 966 FRNDIVLDFNKPSGKSKVMLLSLTAGGVGLNL-VGANHLLLLDPHWNPQLEAQAQDRV-- 1022 Query: 154 TRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + G + V+++ + T+++ + K I D +L Sbjct: 1023 ---YRVGQTKPVYIWKFMCAETVEQKIHALQEHKLGIADGVLTG 1063 >gi|307191137|gb|EFN74835.1| DNA excision repair protein ERCC-6 [Camponotus floridanus] Length = 983 Score = 87.7 bits (216), Expect = 9e-16, Method: Composition-based stats. Identities = 26/146 (17%), Positives = 51/146 (34%), Gaps = 17/146 (11%) Query: 69 APIIVA---YHFNSDLARLQKA-------FPQGRTLDKDPCTIQEWNE-GKIPLLFAHPA 117 +++ L L + + + TI +N + Sbjct: 552 HRVLLFTQGRQMMHILESLLQREGYTYLRMDGTTAMSQRQQTIHTFNNRPSYFVFLLTTR 611 Query: 118 SCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 G G+NL G + ++ + W+ Q ER + G + V VY LI TI+ Sbjct: 612 VGGLGVNL-IGADRVIIYDPDWNPATDAQARERAW-----RIGQNKQVTVYRLITAGTIE 665 Query: 178 ELVLQRLRTKSTIQDLLLNALKKETI 203 E + R K + + +L+ ++ + Sbjct: 666 EKMYHRQIFKLLLSNKVLDDPRQRRL 691 >gi|297663856|ref|XP_002810379.1| PREDICTED: chromodomain-helicase-DNA-binding protein 1-like isoform 1 [Pongo abelii] Length = 903 Score = 87.7 bits (216), Expect = 9e-16, Method: Composition-based stats. Identities = 35/217 (16%), Positives = 81/217 (37%), Gaps = 35/217 (16%) Query: 1 MKQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDE--------EKHWKEVH 52 MK F+ E+ + ++ N S+ KC + +D H E Sbjct: 300 MKDLDAFENEM-----AKKVKLQNILSQLRKC---VDHPYLFDGVEPEPFEVGDHLIE-A 350 Query: 53 DEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAFP---------QGRTLDKDPC-T 100 K+ L+ ++ + +++ L LQ G ++ Sbjct: 351 SGKLHLLDKLLAFLYSGGHRVLLFSQMTQMLDILQDYMDYRGYSYERVDGSVRGEERHLA 410 Query: 101 IQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 I+ + + I + + G G+NL + ++F ++ + Q R + G Sbjct: 411 IKNFGQQPIFVFLLSTRAGGVGMNLT-AADTVIFVDSDFNPQNDLQAAAR-----AHRIG 464 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 ++V V LI ++T++E+V ++ +K + ++++ Sbjct: 465 QNKSVKVIRLIGRDTVEEIVYRKAASKLQLTNMIIEG 501 >gi|195161920|ref|XP_002021804.1| GL26702 [Drosophila persimilis] gi|194103604|gb|EDW25647.1| GL26702 [Drosophila persimilis] Length = 1943 Score = 87.7 bits (216), Expect = 9e-16, Method: Composition-based stats. Identities = 29/173 (16%), Positives = 63/173 (36%), Gaps = 20/173 (11%) Query: 40 VYYDEEKHWKEVHDEKIKALEVIIEKAN--AAPIIVAYHFNSDLARL-----QKAFPQGR 92 + DE K+ L+ ++ + +++ L L ++ FP R Sbjct: 855 LQQDEALQTLLKGSGKLVLLDKLLCRLKETGHRVLIFSQMVRMLDVLADYLQKRHFPFQR 914 Query: 93 TLDK-----DPCTIQEWN-EGKIPL-LFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQ 145 + +N EG + G G+NL + ++ F W+ + Sbjct: 915 LDGSIKGEMRRQALDHFNAEGSQDFCFLLSTRAGGLGINL-ATADTVIIFDSDWNPQNDL 973 Query: 146 QMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNAL 198 Q R + G K V +Y L+ +++E +++R + K + L++ + Sbjct: 974 QAQAR-----AHRIGQKNQVNIYRLVTARSVEEQIVERAKQKMVLDHLVIQRM 1021 >gi|50554893|ref|XP_504855.1| YALI0F01232p [Yarrowia lipolytica] gi|49650725|emb|CAG77657.1| YALI0F01232p [Yarrowia lipolytica] Length = 844 Score = 87.7 bits (216), Expect = 9e-16, Method: Composition-based stats. Identities = 39/195 (20%), Positives = 74/195 (37%), Gaps = 29/195 (14%) Query: 11 LYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKAL-EVIIE-KANA 68 L DL IE ++ + +Q N W+ KI+AL E + + +++ Sbjct: 638 LTIDLNAPAIEQETNSKEKTSIVQRIN------MTGGWR--SSTKIEALVEELYKLRSDR 689 Query: 69 API--IVAYHFNSDLA----RLQKAFPQGRTLDKDPCTIQEWN-------EGKIPLLFAH 115 I IV F S L RL++A Q L + Q N ++ + Sbjct: 690 QTIKSIVFSQFTSMLDLVEWRLRRAGFQTVKLQGNMSPTQRQNSIKYFMENPQVEVFLVS 749 Query: 116 PASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNT 175 + G LNL + + WW+ Q +R+ + G R V + +++ Sbjct: 750 LKAGGVALNLCEASQVFIL-DPWWNPSVEWQSGDRV-----HRIGQHRPVKITRFAIEDS 803 Query: 176 IDELVLQRLRTKSTI 190 I+ +++ K+++ Sbjct: 804 IESRIIELQEKKASM 818 >gi|316975021|gb|EFV58483.1| putative immunoglobulin domain protein [Trichinella spiralis] Length = 858 Score = 87.7 bits (216), Expect = 9e-16, Method: Composition-based stats. Identities = 22/106 (20%), Positives = 46/106 (43%), Gaps = 6/106 (5%) Query: 91 GRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 T ++ + + + + G+NL G N +V F W+ Q + R Sbjct: 515 ASTRERLAKKFNDETNRRCRVFLLSTKAGSLGINL-IGANRVVVFDANWNPSHDLQAMFR 573 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + + G + V++Y LIA+ T++E + QR K ++ +++ Sbjct: 574 V-----YRLGQCKPVYIYRLIAKGTMEETIYQRQVVKQSLSCRVID 614 >gi|309362352|emb|CAP28139.2| hypothetical protein CBG_08287 [Caenorhabditis briggsae AF16] Length = 1512 Score = 87.7 bits (216), Expect = 9e-16, Method: Composition-based stats. Identities = 42/225 (18%), Positives = 79/225 (35%), Gaps = 35/225 (15%) Query: 3 QYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDE-----EKHWKEVH----- 52 Y ++ L D + + A + ++ V +L N + HWK Sbjct: 784 IYRHMKKGLLLDAKASS-GARSLSNTIVHLRKLCNHPFLFQNIEDSCRAHWKVNEVNGKE 842 Query: 53 ----DEKIKALEVIIEK--ANAAPIIVAYH----------FNSDLARLQKAFPQGRTLDK 96 K++ L+ I+ K A+ +++ + F D+ Sbjct: 843 LMRVAGKLELLDRILPKLKASGHRVLMFFQMTKMMDIFEDFLHFRNYTYLRLDGSTKPDE 902 Query: 97 DPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 + +N L + G GLNLQ + ++ F W+ + Q Sbjct: 903 RGDLLSLYNAPDSEYFLFMLSTRAGGLGLNLQT-ADTVIIFDSDWNPHQDMQA-----QD 956 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 R + G K+ V V LI N+++E +L R K + + ++ A K Sbjct: 957 RAHRIGQKKEVRVLRLITANSVEEKMLAVARYKLNVDEKVIQAGK 1001 >gi|119188869|ref|XP_001245041.1| hypothetical protein CIMG_04482 [Coccidioides immitis RS] Length = 1011 Score = 87.7 bits (216), Expect = 9e-16, Method: Composition-based stats. Identities = 29/138 (21%), Positives = 51/138 (36%), Gaps = 17/138 (12%) Query: 66 ANAAPIIVAYHFNSDLARLQKAFPQGR----------TLDKDPCTIQEWN-EGKIPLLFA 114 AN ++V H L LQ F + + + ++N + + + Sbjct: 612 ANGDKVLVFSHSVRLLRMLQMLFNHTSYNVSYLDGTMSYEDRAKVVDDFNADPRQFVFLI 671 Query: 115 HPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQN 174 + G GLN+ N +V W+ Q R + G +R V V+ L++ Sbjct: 672 STKAGGVGLNIT-SANKVVVVDPNWNPSHDLQA-----QDRAYRIGQRRDVEVFRLVSAG 725 Query: 175 TIDELVLQRLRTKSTIQD 192 TI+E+V R K + Sbjct: 726 TIEEIVYARQIYKQQQAN 743 >gi|221114007|ref|XP_002155441.1| PREDICTED: similar to DNA excision repair protein ERCC-6 [Hydra magnipapillata] Length = 1079 Score = 87.7 bits (216), Expect = 9e-16, Method: Composition-based stats. Identities = 28/156 (17%), Positives = 56/156 (35%), Gaps = 19/156 (12%) Query: 53 DEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAFPQGRT----------LDKDPCT 100 K+ +E ++ K +++ L L+ + Sbjct: 597 SGKMIVVENLLRMWKHQGHRVLLFTQSKQMLDILEGFLKAAEHSYMRMDGTTSVKSRHGI 656 Query: 101 IQEWNEGK-IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQA 159 +++++E K I + G GLNL N ++ + W+ Q ER + Sbjct: 657 VKKFHESKNIFVFLLTTRVGGLGLNL-IAANRVIIYDPDWNPSVDSQARERSW-----RI 710 Query: 160 GFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 G + V +Y L+ TI+E + R K + + +L Sbjct: 711 GQLKDVTIYRLLTTGTIEEKIYHRQIFKQFLTNRVL 746 >gi|119392064|ref|NP_963999.2| chromodomain-helicase-DNA-binding protein 8 [Mus musculus] gi|123778258|sp|Q09XV5|CHD8_MOUSE RecName: Full=Chromodomain-helicase-DNA-binding protein 8; Short=CHD-8; AltName: Full=ATP-dependent helicase CHD8; AltName: Full=Axis duplication inhibitor; Short=Duplin gi|77744590|gb|ABB02259.1| chromodomain helicase DNA binding protein 8 [Mus musculus] Length = 2582 Score = 87.7 bits (216), Expect = 9e-16, Method: Composition-based stats. Identities = 26/146 (17%), Positives = 52/146 (35%), Gaps = 18/146 (12%) Query: 65 KANAAPIIVAYHFNSDLARLQKAFPQGRTL----------DKDPCTIQEWNEGKIP--LL 112 KA +++ L L+ Q R L + I +++ + Sbjct: 1148 KAGGHKVLIFSQMVRCLDILEDYLIQRRYLYERIDGRVRGNLRQAAIDRFSKPDSDRFVF 1207 Query: 113 FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIA 172 + G G+NL + + F W+ + Q R + G +AV VY LI Sbjct: 1208 LLCTRAGGLGINLT-AADTCIIFDSDWNPQNDLQAQARC-----HRIGQSKAVKVYRLIT 1261 Query: 173 QNTIDELVLQRLRTKSTIQDLLLNAL 198 +N+ + + + K + +L ++ Sbjct: 1262 RNSYEREMFDKASLKLGLDKAVLQSM 1287 >gi|149244294|ref|XP_001526690.1| DNA repair protein RAD16 [Lodderomyces elongisporus NRRL YB-4239] gi|146449084|gb|EDK43340.1| DNA repair protein RAD16 [Lodderomyces elongisporus NRRL YB-4239] Length = 902 Score = 87.7 bits (216), Expect = 9e-16, Method: Composition-based stats. Identities = 32/202 (15%), Positives = 70/202 (34%), Gaps = 30/202 (14%) Query: 10 ELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEV----IIEK 65 +L + E F AS + Q ++G W+ KI+AL + Sbjct: 696 DLEQPAIEVDEELFTKASIVNRIKQGSHG-------GEWR--SSTKIEALVEELYKLRSD 746 Query: 66 ANAAPIIVAYHFNSDLARLQKAFPQG-----------RTLDKDPCTIQEWNEGKIPLLFA 114 + IV F S L ++ + +D + ++ + Sbjct: 747 RHTIKSIVFSQFTSMLDLIEWRLKRAGFQTAKLSGSMSPQQRDNTIKYFMDNTEVEVFLV 806 Query: 115 HPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQN 174 + G LNL + + WW+ Q ++R+ + G KR + + ++ Sbjct: 807 SLKAGGVALNLCE-ASQVFLMDPWWNPSVEWQSMDRV-----HRIGQKRPIRITRFCIED 860 Query: 175 TIDELVLQRLRTKSTIQDLLLN 196 +I+ +++ K+ + + +N Sbjct: 861 SIELKIIELQDKKANMINATIN 882 >gi|148710305|gb|EDL42251.1| mCG18716, isoform CRA_b [Mus musculus] Length = 2582 Score = 87.7 bits (216), Expect = 9e-16, Method: Composition-based stats. Identities = 26/146 (17%), Positives = 52/146 (35%), Gaps = 18/146 (12%) Query: 65 KANAAPIIVAYHFNSDLARLQKAFPQGRTL----------DKDPCTIQEWNEGKIP--LL 112 KA +++ L L+ Q R L + I +++ + Sbjct: 1148 KAGGHKVLIFSQMVRCLDILEDYLIQRRYLYERIDGRVRGNLRQAAIDRFSKPDSDRFVF 1207 Query: 113 FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIA 172 + G G+NL + + F W+ + Q R + G +AV VY LI Sbjct: 1208 LLCTRAGGLGINLT-AADTCIIFDSDWNPQNDLQAQARC-----HRIGQSKAVKVYRLIT 1261 Query: 173 QNTIDELVLQRLRTKSTIQDLLLNAL 198 +N+ + + + K + +L ++ Sbjct: 1262 RNSYEREMFDKASLKLGLDKAVLQSM 1287 >gi|30089126|emb|CAD35753.1| X-linked nuclear protein [Dugesia japonica] Length = 1076 Score = 87.7 bits (216), Expect = 9e-16, Method: Composition-based stats. Identities = 33/160 (20%), Positives = 63/160 (39%), Gaps = 11/160 (6%) Query: 41 YYDEEKHWKEVHDEKIKALEVIIEKA---NAAPIIVAYHFNS-DLARLQKAFPQGRTLDK 96 Y E E E +K L I+++ II D R+ + Q Sbjct: 735 YLQELHTIAEKIQEDLKKLNDSIDQSPTTAEEDIIYNSWIKGLDYDRMDGST-QAFVRAD 793 Query: 97 DPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 + + ++ L + G G+NL N ++ F + W+ Q I R Sbjct: 794 IQSRFNSFEDHRLRLFLISTRAGGMGVNL-VAANRVIIFDVSWNPSHDVQAI-----FRS 847 Query: 157 RQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + G + V+VY ++Q T++E + +R TK ++ +++ Sbjct: 848 YRFGQNKPVYVYRFVSQGTMEEKIYERQVTKQSLSLRVVD 887 >gi|213402009|ref|XP_002171777.1| DNA repair protein RAD16 [Schizosaccharomyces japonicus yFS275] gi|211999824|gb|EEB05484.1| DNA repair protein RAD16 [Schizosaccharomyces japonicus yFS275] Length = 895 Score = 87.7 bits (216), Expect = 9e-16, Method: Composition-based stats. Identities = 34/160 (21%), Positives = 57/160 (35%), Gaps = 21/160 (13%) Query: 52 HDEKIKALEVIIEKANAA----PIIVAYHFNSDLA----RLQKA------FPQGRTLDKD 97 KI+AL + IV F + L RL+KA G T Sbjct: 722 SSTKIEALVEELYMLRRKDRTTKSIVFSQFAAMLDLVSWRLRKAGFNCVRLEGGMTPKAR 781 Query: 98 PCTIQEWNEG-KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 TI+ + I + + G LNL + + WW+ Q ++RI Sbjct: 782 DATIKAFCSDVNITVFLVSLKAGGIALNLTE-ASQVFMLDPWWNASTQLQAMDRI----- 835 Query: 157 RQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + G R + + L +N+I+ ++Q K + L+ Sbjct: 836 HRIGQCRPIRITTLCIENSIESKIIQLQEKKEKLVKATLD 875 >gi|268553029|ref|XP_002634497.1| Hypothetical protein CBG08287 [Caenorhabditis briggsae] Length = 1480 Score = 87.7 bits (216), Expect = 9e-16, Method: Composition-based stats. Identities = 42/225 (18%), Positives = 79/225 (35%), Gaps = 35/225 (15%) Query: 3 QYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDE-----EKHWKEVH----- 52 Y ++ L D + + A + ++ V +L N + HWK Sbjct: 784 IYRHMKKGLLLDAKASS-GARSLSNTIVHLRKLCNHPFLFQNIEDSCRAHWKVNEVNGKE 842 Query: 53 ----DEKIKALEVIIEK--ANAAPIIVAYH----------FNSDLARLQKAFPQGRTLDK 96 K++ L+ I+ K A+ +++ + F D+ Sbjct: 843 LMRVAGKLELLDRILPKLKASGHRVLMFFQMTKMMDIFEDFLHFRNYTYLRLDGSTKPDE 902 Query: 97 DPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 + +N L + G GLNLQ + ++ F W+ + Q Sbjct: 903 RGDLLSLYNAPDSEYFLFMLSTRAGGLGLNLQT-ADTVIIFDSDWNPHQDMQA-----QD 956 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 R + G K+ V V LI N+++E +L R K + + ++ A K Sbjct: 957 RAHRIGQKKEVRVLRLITANSVEEKMLAVARYKLNVDEKVIQAGK 1001 >gi|307107878|gb|EFN56119.1| hypothetical protein CHLNCDRAFT_144734 [Chlorella variabilis] Length = 1822 Score = 87.7 bits (216), Expect = 9e-16, Method: Composition-based stats. Identities = 27/148 (18%), Positives = 56/148 (37%), Gaps = 18/148 (12%) Query: 68 AAPIIVAYHFNSDLARLQ---------KAFPQGRTLDKDPCT-IQEWNE--GKIPLLFAH 115 +++ F L L+ G + I +N + L Sbjct: 635 GHRVLIYSQFLLMLDVLEWYCAARGHSYLRLDGSVGTAERQRRIDAFNGQPSRYFLFLLS 694 Query: 116 PASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNT 175 + G G+NL + +V + W+ Q R + G V VY L+A+ T Sbjct: 695 TRAGGLGINL-ATADTVVLYDSDWNPHNDLQAQAR-----AHRLGQSSGVMVYRLVARAT 748 Query: 176 IDELVLQRLRTKSTIQDLLLNALKKETI 203 ++E ++QR + K ++ +++ +K++ Sbjct: 749 VEERMMQRAKGKLVLEHVVVRKMKRQPR 776 >gi|170036699|ref|XP_001846200.1| chromodomain helicase-DNA-binding protein 3 [Culex quinquefasciatus] gi|167879513|gb|EDS42896.1| chromodomain helicase-DNA-binding protein 3 [Culex quinquefasciatus] Length = 1982 Score = 87.7 bits (216), Expect = 9e-16, Method: Composition-based stats. Identities = 23/150 (15%), Positives = 53/150 (35%), Gaps = 20/150 (13%) Query: 55 KIKALEVIIEKAN--AAPIIVAYHFNSDLARLQ----------KAFPQGRTLDKDPCTIQ 102 K+ LE ++++ +++ L ++ + G T I Sbjct: 1074 KLVLLEKMLKQLKETGHRVLIFSQMTKMLDIMEDFLEGIGYKYERIDGGITGTLRQEAID 1133 Query: 103 EWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 +N + + G G+NL + ++ + W+ Q +R + G Sbjct: 1134 RFNAPGAQQFCFLLSTKAGGLGINL-ATADTVIIYDSDWNPHNDIQA-----FSRAHRIG 1187 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 V +Y + +N+++E V Q + K + Sbjct: 1188 QANKVMIYRFVTRNSVEERVTQVAKRKMML 1217 >gi|189237363|ref|XP_970443.2| PREDICTED: similar to kismet CG3696-PA [Tribolium castaneum] Length = 4044 Score = 87.7 bits (216), Expect = 1e-15, Method: Composition-based stats. Identities = 23/146 (15%), Positives = 52/146 (35%), Gaps = 18/146 (12%) Query: 65 KANAAPIIVAYHFNSDLARLQKAF---------PQGRTL-DKDPCTIQEWNEGKIP--LL 112 KAN +++ L L+ GR + I ++ + Sbjct: 1888 KANGHRVLIFSQMVRCLDILEDYLMFRKYPFERIDGRIRGNLRQAAIDRFSRPDSDRFVF 1947 Query: 113 FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIA 172 + G G+NL + ++ + W+ + Q R + G ++ V +Y L+ Sbjct: 1948 LLCTKAGGLGINLT-AADTVIIYDSDWNPQNDLQAQARC-----HRIGQQKMVKIYRLLC 2001 Query: 173 QNTIDELVLQRLRTKSTIQDLLLNAL 198 +NT + + + K + +L ++ Sbjct: 2002 RNTYEREMFDKASLKLGLDKAILQSM 2027 >gi|156058402|ref|XP_001595124.1| hypothetical protein SS1G_03212 [Sclerotinia sclerotiorum 1980] gi|154701000|gb|EDO00739.1| hypothetical protein SS1G_03212 [Sclerotinia sclerotiorum 1980 UF-70] Length = 1142 Score = 87.7 bits (216), Expect = 1e-15, Method: Composition-based stats. Identities = 31/147 (21%), Positives = 54/147 (36%), Gaps = 17/147 (11%) Query: 59 LEVIIEKANAAPIIVAYHFNSDLARLQKAF---------PQGRTLDKDPCTI--QEWNEG 107 L+ + +++ + +V F S L+ ++ A G K + Q N Sbjct: 981 LKTLRKESPSTKSVVFSQFTSFLSLIEPALTRSSIPFLRLDGSMAQKARAAVLTQFKNSE 1040 Query: 108 KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFV 167 K +L + G GLNL + WW Q I+R+ + G V V Sbjct: 1041 KGVVLLLSLRAGGVGLNLTM-AKRVFMMDPWWSFAVEAQAIDRV-----HRMGQVDEVLV 1094 Query: 168 YYLIAQNTIDELVLQRLRTKSTIQDLL 194 I + +++E +L+ K I L Sbjct: 1095 KRFIVKGSVEERMLRVQERKKFIASSL 1121 >gi|300121547|emb|CBK22066.2| unnamed protein product [Blastocystis hominis] Length = 787 Score = 87.7 bits (216), Expect = 1e-15, Method: Composition-based stats. Identities = 28/167 (16%), Positives = 59/167 (35%), Gaps = 20/167 (11%) Query: 47 HWKEVHDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQ----------KAFPQGRTL 94 + K+ L+ ++ +A +++ + L +Q + G + Sbjct: 476 KYITYASGKMVVLDKLLPKLRAQGHRVLLFSQMVNMLNIIQDYLSMKGYPFERIDGGVKI 535 Query: 95 DKDPCTIQEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIG 152 I ++ + + G G+NL + ++ + W+ + Q R Sbjct: 536 SDRQAAIDRFSTPGSDRFIFLICTRAGGVGINLT-AADTVIIYDSDWNPQNDIQAQARC- 593 Query: 153 VTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 + G +AV VY LI T + + Q+ K + +LN LK Sbjct: 594 ----HRIGQDKAVKVYRLITNRTYEMEMFQKANMKLGLDKAVLNPLK 636 >gi|320035113|gb|EFW17055.1| DNA excision repair protein [Coccidioides posadasii str. Silveira] Length = 1011 Score = 87.7 bits (216), Expect = 1e-15, Method: Composition-based stats. Identities = 29/138 (21%), Positives = 51/138 (36%), Gaps = 17/138 (12%) Query: 66 ANAAPIIVAYHFNSDLARLQKAFPQGR----------TLDKDPCTIQEWN-EGKIPLLFA 114 AN ++V H L LQ F + + + ++N + + + Sbjct: 612 ANGDKVLVFSHSVRLLRMLQMLFNHTSYNVSYLDGTMSYEDRAKVVDDFNADPRQFVFLI 671 Query: 115 HPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQN 174 + G GLN+ N +V W+ Q R + G +R V V+ L++ Sbjct: 672 STKAGGVGLNIT-SANKVVVVDPNWNPSHDLQA-----QDRAYRIGQRRDVEVFRLVSAG 725 Query: 175 TIDELVLQRLRTKSTIQD 192 TI+E+V R K + Sbjct: 726 TIEEIVYARQIYKQQQAN 743 >gi|307180140|gb|EFN68184.1| Chromodomain-helicase-DNA-binding protein Mi-2-like protein [Camponotus floridanus] Length = 1960 Score = 87.7 bits (216), Expect = 1e-15, Method: Composition-based stats. Identities = 23/150 (15%), Positives = 55/150 (36%), Gaps = 20/150 (13%) Query: 55 KIKALEVIIEKA--NAAPIIVAYHFNSDLARLQKAFP----QGRTLD------KDPCTIQ 102 K+ L +++K + +++ L L+ + +D + I Sbjct: 1041 KLVLLSKMLKKLRDDGHRVLIFSQMTKMLDILEDYLEGEGYKYERIDGNITGSQRQEAID 1100 Query: 103 EWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 +N + + + G G+NL + ++ + W+ Q +R + G Sbjct: 1101 RFNAPGAQQFVFLLSTRAGGLGINL-ATADTVIIYDSDWNPHNDIQA-----FSRAHRIG 1154 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 V +Y + +N+++E V Q + K + Sbjct: 1155 QANKVMIYRFVTRNSVEERVTQVAKRKMML 1184 >gi|73999128|ref|XP_857674.1| PREDICTED: similar to chromodomain helicase DNA binding protein 7 isoform 3 [Canis familiaris] Length = 2191 Score = 87.7 bits (216), Expect = 1e-15, Method: Composition-based stats. Identities = 35/233 (15%), Positives = 80/233 (34%), Gaps = 42/233 (18%) Query: 2 KQYHK-FQRE-LYCDLQGENIEAFNSASKTVKCLQLANGA--VYYDEEKHWKEV------ 51 K Y ++ + G N + ++ + N + EEK +E Sbjct: 411 KYYRAILEKNFTFLSKGGGQANVPNLLNTMMELRKCCNHPYLINGAEEKILEEFKETHNA 470 Query: 52 --HDEKIKALEV------IIEK------ANAAPIIVAYHFNSDLAR-----LQKAFPQGR 92 D +++A+ +I+K A +++ L +Q+ +P R Sbjct: 471 DSPDFQLQAMIQAAGKLVLIDKLLPKLKAGGHRVLIFSQMVRCLDILEDYLIQRRYPYER 530 Query: 93 TLDK-----DPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQ 145 + I +++ + + G G+NL + + F W+ + Sbjct: 531 IDGRVRGNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLT-AADTCIIFDSDWNPQNDL 589 Query: 146 QMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNAL 198 Q R + G ++V +Y LI +N+ + + + K + +L ++ Sbjct: 590 QAQARC-----HRIGQSKSVKIYRLITRNSYEREMFDKASLKLGLDKAVLQSM 637 >gi|224098212|ref|XP_002194690.1| PREDICTED: similar to excision repair cross-complementing rodent repair deficiency, complementation group 6-like [Taeniopygia guttata] Length = 1170 Score = 87.7 bits (216), Expect = 1e-15, Method: Composition-based stats. Identities = 25/142 (17%), Positives = 50/142 (35%), Gaps = 16/142 (11%) Query: 59 LEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTL----------DKDPCTIQEWNEGK 108 LE + E+ + + D+ L + Q + L +++ Sbjct: 478 LERLREEGHRTLVFSQSRKMLDIIELVLSRRQFQILRIDGTVTHLTERERRINAFQTNTT 537 Query: 109 IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVY 168 + G G+ L + +V F W+ Q ++R + G K V +Y Sbjct: 538 YSVFLLTTQVGGVGITLT-AASRVVIFDPSWNPATDAQAVDR-----AYRIGQKENVVIY 591 Query: 169 YLIAQNTIDELVLQRLRTKSTI 190 LI T++E + +R K ++ Sbjct: 592 RLITCGTVEEKIYRRQVFKDSL 613 >gi|195435393|ref|XP_002065676.1| GK15574 [Drosophila willistoni] gi|194161761|gb|EDW76662.1| GK15574 [Drosophila willistoni] Length = 1941 Score = 87.7 bits (216), Expect = 1e-15, Method: Composition-based stats. Identities = 30/173 (17%), Positives = 63/173 (36%), Gaps = 20/173 (11%) Query: 40 VYYDEEKHWKEVHDEKIKALEVIIEKAN--AAPIIVAYHFNSDLA----RLQKAFPQGRT 93 + DE K+ L+ ++ + +++ L LQK + Sbjct: 844 LQQDEALQTLLKGSGKLVLLDKLLCRLKETGHRVLIFSQMVRMLDVLADYLQKRHFSFQR 903 Query: 94 LDK------DPCTIQEWN-EGKIPL-LFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQ 145 LD + +N EG + G G+NL + ++ F W+ + Sbjct: 904 LDGSIKGEMRRQALDHFNAEGSQDFCFLLSTRAGGLGINL-ATADTVIIFDSDWNPQNDL 962 Query: 146 QMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNAL 198 Q R + G K V +Y L+ +++E +++R + K + L++ + Sbjct: 963 QAQAR-----AHRIGQKNQVNIYRLVTARSVEEQIVERAKQKMVLDHLVIQRM 1010 >gi|47217489|emb|CAG10869.1| unnamed protein product [Tetraodon nigroviridis] Length = 861 Score = 87.7 bits (216), Expect = 1e-15, Method: Composition-based stats. Identities = 35/179 (19%), Positives = 68/179 (37%), Gaps = 21/179 (11%) Query: 32 CLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAP--IIVAYHFNSDLARLQKAFP 89 C Q ++ + Y + + K L+ ++ +++ F L ++ Sbjct: 669 CQQYSSISSYQLDTD--LLLDSGKFILLKELLTSLKKKGDRVVLFSQFTMMLDIIEVLLK 726 Query: 90 ---------QGRTLDKDPCT-IQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLW 138 G T D I E+N + I + + G G+NL N+++ + Sbjct: 727 HLSHRYIRLDGSTPIADRIVLIDEYNTDSDIFVFLLSTRAGGLGINLT-SANVVILHDID 785 Query: 139 WDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + +Q +R + G R V V LI++ TIDE +LQ + K ++ + A Sbjct: 786 CNPYNDKQAEDRC-----HRVGQTRTVRVIKLISKGTIDECILQLGQKKLKLEHDMTAA 839 >gi|256052547|ref|XP_002569826.1| chromodomain helicase DNA binding protein [Schistosoma mansoni] gi|227284553|emb|CAY17238.1| chromodomain helicase DNA binding protein, putative [Schistosoma mansoni] Length = 1966 Score = 87.7 bits (216), Expect = 1e-15, Method: Composition-based stats. Identities = 22/152 (14%), Positives = 49/152 (32%), Gaps = 20/152 (13%) Query: 53 DEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQ----------KAFPQGRTLDKDPCT 100 K++ + ++ K +++ L L+ + T Sbjct: 1117 SGKLELMSKMLRKLYETKHRVLIFSQMTKMLDLLEDFLDSEGYKFERIDGAVTGQLRQDA 1176 Query: 101 IQEWNEGKI--PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQ 158 I +N + G G+NL + ++ + W+ Q +R + Sbjct: 1177 IDRFNAPDSLSFAFLLSTRAGGLGINL-ASADTVIIYDSDWNPHNDIQA-----FSRAHR 1230 Query: 159 AGFKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 G V +Y + + T++E V Q + K + Sbjct: 1231 IGQSNKVMIYRFVTRGTVEERVTQVAKKKMML 1262 >gi|151946506|gb|EDN64728.1| radiation sensitive protein [Saccharomyces cerevisiae YJM789] Length = 790 Score = 87.3 bits (215), Expect = 1e-15, Method: Composition-based stats. Identities = 29/169 (17%), Positives = 60/169 (35%), Gaps = 23/169 (13%) Query: 43 DEEKHWKEVHDEKIKAL-EVIIE-KANAAPI--IVAYHFNSDLARLQKAFPQG------- 91 + W+ KI+AL E + + ++N I IV F S L ++ + Sbjct: 610 NMSGKWQ--SSTKIEALVEELYKLRSNKRTIKSIVFSQFTSMLDLVEWRLKRAGFQTVKL 667 Query: 92 ----RTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQM 147 +D N + + + G LNL + + WW+ Q Sbjct: 668 QGSMSPTQRDETIKYFMNNIQCEVFLVSLKAGGVALNLCEASQVFIL-DPWWNPSVEWQS 726 Query: 148 IERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 +R+ + G R V + +++I+ +++ K+ + +N Sbjct: 727 GDRV-----HRIGQYRPVKITRFCIEDSIEARIIELQEKKANMIHATIN 770 >gi|157134598|ref|XP_001663322.1| chromodomain helicase DNA binding protein [Aedes aegypti] gi|108870420|gb|EAT34645.1| chromodomain helicase DNA binding protein [Aedes aegypti] Length = 340 Score = 87.3 bits (215), Expect = 1e-15, Method: Composition-based stats. Identities = 24/150 (16%), Positives = 53/150 (35%), Gaps = 20/150 (13%) Query: 55 KIKALEVIIEKA--NAAPIIVAYHFNSDLARLQ----------KAFPQGRTLDKDPCTIQ 102 K+ LE ++++ +++ L L+ + G T I Sbjct: 103 KLVLLEKMLKQLKEQGHRVLIFSQMTKMLDILEDFLEGFGYKYERIDGGITGTLRQEAID 162 Query: 103 EWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 +N + + G G+NL + ++ + W+ Q +R + G Sbjct: 163 RFNAPGAQQFCFLLSTKAGGLGINL-ATADTVIIYDSDWNPHNDIQA-----FSRAHRIG 216 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 V +Y + +N+++E V Q + K + Sbjct: 217 QANKVMIYRFVTRNSVEERVTQVAKRKMML 246 >gi|323349726|gb|EGA83941.1| Rad16p [Saccharomyces cerevisiae Lalvin QA23] Length = 790 Score = 87.3 bits (215), Expect = 1e-15, Method: Composition-based stats. Identities = 29/169 (17%), Positives = 60/169 (35%), Gaps = 23/169 (13%) Query: 43 DEEKHWKEVHDEKIKAL-EVIIE-KANAAPI--IVAYHFNSDLARLQKAFPQG------- 91 + W+ KI+AL E + + ++N I IV F S L ++ + Sbjct: 610 NMSGKWQ--SSTKIEALVEELYKLRSNKRTIKSIVFSQFTSMLDLVEWRLKRAGFQTVKL 667 Query: 92 ----RTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQM 147 +D N + + + G LNL + + WW+ Q Sbjct: 668 QGSMSPTQRDETIKYFMNNIQCEVFLVSLKAGGVALNLCEASQVFIL-DPWWNPSVEWQS 726 Query: 148 IERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 +R+ + G R V + +++I+ +++ K+ + +N Sbjct: 727 GDRV-----HRIGQYRPVKITRFCIEDSIEARIIELQEKKANMIHATIN 770 >gi|312068394|ref|XP_003137194.1| BRM protein [Loa loa] gi|307767650|gb|EFO26884.1| BRM protein [Loa loa] Length = 619 Score = 87.3 bits (215), Expect = 1e-15, Method: Composition-based stats. Identities = 34/172 (19%), Positives = 65/172 (37%), Gaps = 22/172 (12%) Query: 43 DEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTL------ 94 D K + L+ ++ K A+ I++ S L + + + R Sbjct: 98 DVTGKDLYRVSGKFELLDRVLPKLKASGHRILMFCQMTS-LMTIMEDYLNYREFKYLRLD 156 Query: 95 -----DKDPCTIQEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQM 147 D+ ++ +N + + + G GLNLQ + ++ F W+ + Q Sbjct: 157 GSTKPDERGQLLELYNAPNSEYFIFMLSTRAGGLGLNLQT-ADTVIIFDSDWNPHQDMQA 215 Query: 148 IERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 R + G R V V L+ N+I+E +L R K + + ++ A K Sbjct: 216 -----QDRAHRIGQSREVRVLRLVTVNSIEEKILAAARYKLNVDEKVIQAGK 262 >gi|198473015|ref|XP_001356144.2| GA17649 [Drosophila pseudoobscura pseudoobscura] gi|198139261|gb|EAL33204.2| GA17649 [Drosophila pseudoobscura pseudoobscura] Length = 1943 Score = 87.3 bits (215), Expect = 1e-15, Method: Composition-based stats. Identities = 29/173 (16%), Positives = 63/173 (36%), Gaps = 20/173 (11%) Query: 40 VYYDEEKHWKEVHDEKIKALEVIIEKAN--AAPIIVAYHFNSDLARL-----QKAFPQGR 92 + DE K+ L+ ++ + +++ L L ++ FP R Sbjct: 855 LQQDEALQTLLKGSGKLVLLDKLLCRLKETGHRVLIFSQMVRMLDVLADYLQKRHFPFQR 914 Query: 93 TLDK-----DPCTIQEWN-EGKIPL-LFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQ 145 + +N EG + G G+NL + ++ F W+ + Sbjct: 915 LDGSIKGEMRRQALDHFNAEGSQDFCFLLSTRAGGLGINL-ATADTVIIFDSDWNPQNDL 973 Query: 146 QMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNAL 198 Q R + G K V +Y L+ +++E +++R + K + L++ + Sbjct: 974 QAQAR-----AHRIGQKNQVNIYRLVTARSVEEQIVERAKQKMVLDHLVIQRM 1021 >gi|303388021|ref|XP_003072245.1| helicase DNA-binding protein [Encephalitozoon intestinalis ATCC 50506] gi|303301384|gb|ADM10885.1| helicase DNA-binding protein [Encephalitozoon intestinalis ATCC 50506] Length = 1225 Score = 87.3 bits (215), Expect = 1e-15, Method: Composition-based stats. Identities = 22/144 (15%), Positives = 48/144 (33%), Gaps = 18/144 (12%) Query: 67 NAAPIIVAYHFNSDLARLQK----------AFPQGRTLDKDPCTIQEWNEG--KIPLLFA 114 N +++ L L + G + I +++ + + Sbjct: 638 NGHKVLIFSQMTRCLDLLAEYLTYRKYKYERIDGGARTENRQAAIDRFSDKTSDVFVFLL 697 Query: 115 HPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQN 174 + G G+NL + ++ F W+ + Q R + G V VY L+ +N Sbjct: 698 STRAGGVGINLT-AADTVIIFDSDWNPQNDLQAQARC-----HRIGQTSEVKVYRLVTEN 751 Query: 175 TIDELVLQRLRTKSTIQDLLLNAL 198 T + + + K + +L + Sbjct: 752 TYEREMFDKAGLKLGLDRAVLQRM 775 >gi|303323511|ref|XP_003071747.1| SNF2 family N-terminal domain containing protein [Coccidioides posadasii C735 delta SOWgp] gi|240111449|gb|EER29602.1| SNF2 family N-terminal domain containing protein [Coccidioides posadasii C735 delta SOWgp] Length = 1011 Score = 87.3 bits (215), Expect = 1e-15, Method: Composition-based stats. Identities = 29/138 (21%), Positives = 51/138 (36%), Gaps = 17/138 (12%) Query: 66 ANAAPIIVAYHFNSDLARLQKAFPQGR----------TLDKDPCTIQEWN-EGKIPLLFA 114 AN ++V H L LQ F + + + ++N + + + Sbjct: 612 ANGDKVLVFSHSVRLLRMLQMLFNHTSYNVSYLDGTMSYEDRAKVVDDFNADPRQFVFLI 671 Query: 115 HPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQN 174 + G GLN+ N +V W+ Q R + G +R V V+ L++ Sbjct: 672 STKAGGVGLNIT-SANKVVVVDPNWNPSHDLQA-----QDRAYRIGQRRDVEVFRLVSAG 725 Query: 175 TIDELVLQRLRTKSTIQD 192 TI+E+V R K + Sbjct: 726 TIEEIVYARQIYKQQQAN 743 >gi|148342542|gb|ABQ59048.1| CHD1L protein [Homo sapiens] Length = 900 Score = 87.3 bits (215), Expect = 1e-15, Method: Composition-based stats. Identities = 34/216 (15%), Positives = 80/216 (37%), Gaps = 33/216 (15%) Query: 1 MKQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYD-------EEKHWKEVHD 53 MK F+ E + ++ N S+ KC + +D E Sbjct: 298 MKDLDAFENET-----AKKVKLQNILSQLRKC---VDHPYLFDGVEPEPFEVGDHLTEAS 349 Query: 54 EKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAFP---------QGRTLDKDPC-TI 101 K++ L+ ++ + +++ L LQ G ++ I Sbjct: 350 GKLQLLDKLLAFLYSGGHRVLLFSQMTQMLDILQDYMDYRGYSYERVDGSVRGEERHLAI 409 Query: 102 QEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGF 161 + + + I + + G G+NL + ++F ++ + Q R + G Sbjct: 410 KNFGQQPIFVFLLSTRAGGVGMNLT-AADTVIFVDSDFNPQNDLQAAAR-----AHRIGQ 463 Query: 162 KRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 ++V V LI ++T++E+V ++ +K + ++++ Sbjct: 464 NKSVKVIRLIGRDTVEEIVYRKAASKLQLTNMIIEG 499 >gi|6319590|ref|NP_009672.1| Rad16p [Saccharomyces cerevisiae S288c] gi|400920|sp|P31244|RAD16_YEAST RecName: Full=DNA repair protein RAD16; AltName: Full=ATP-dependent helicase RAD16 gi|3551|emb|CAA46974.1| excision repair protein [Saccharomyces cerevisiae] gi|476069|emb|CAA55616.1| UV damage repair protein [Saccharomyces cerevisiae] gi|487900|gb|AAA34931.1| RAD16 [Saccharomyces cerevisiae] gi|536453|emb|CAA85071.1| RAD16 [Saccharomyces cerevisiae] gi|285810448|tpg|DAA07233.1| TPA: Rad16p [Saccharomyces cerevisiae S288c] Length = 790 Score = 87.3 bits (215), Expect = 1e-15, Method: Composition-based stats. Identities = 29/169 (17%), Positives = 60/169 (35%), Gaps = 23/169 (13%) Query: 43 DEEKHWKEVHDEKIKAL-EVIIE-KANAAPI--IVAYHFNSDLARLQKAFPQG------- 91 + W+ KI+AL E + + ++N I IV F S L ++ + Sbjct: 610 NMSGKWQ--SSTKIEALVEELYKLRSNKRTIKSIVFSQFTSMLDLVEWRLKRAGFQTVKL 667 Query: 92 ----RTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQM 147 +D N + + + G LNL + + WW+ Q Sbjct: 668 QGSMSPTQRDETIKYFMNNIQCEVFLVSLKAGGVALNLCEASQVFIL-DPWWNPSVEWQS 726 Query: 148 IERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 +R+ + G R V + +++I+ +++ K+ + +N Sbjct: 727 GDRV-----HRIGQYRPVKITRFCIEDSIEARIIELQEKKANMIHATIN 770 >gi|171681928|ref|XP_001905907.1| hypothetical protein [Podospora anserina S mat+] gi|170940923|emb|CAP66573.1| unnamed protein product [Podospora anserina S mat+] Length = 1119 Score = 87.3 bits (215), Expect = 1e-15, Method: Composition-based stats. Identities = 32/158 (20%), Positives = 57/158 (36%), Gaps = 19/158 (12%) Query: 53 DEKIKALEVII-EKANAAPIIVAYHFNSDLARL------QKAFPQGRTLDKDPCTIQE-- 103 KI+ L I+ ++A+ IV F S L + Q R K P +E Sbjct: 898 SAKIRELLSILRKEAHEHKFIVFSQFTSMLDLIEPFLRSQPGMKAVRYDGKMPNDAREAA 957 Query: 104 ----WNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQA 159 + +L GLNL ++ +W+ +Q I+R+ + Sbjct: 958 LKALRTDPHTRILLCSLKCGSLGLNLT-AATRVIIVEPFWNPFVEEQAIDRV-----HRL 1011 Query: 160 GFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 V VY L Q+T++ +L+ K + + + Sbjct: 1012 TQTVDVIVYKLTVQDTVEARILELQNKKRMLAEATIEG 1049 >gi|258572294|ref|XP_002544909.1| hypothetical protein UREG_04426 [Uncinocarpus reesii 1704] gi|237905179|gb|EEP79580.1| hypothetical protein UREG_04426 [Uncinocarpus reesii 1704] Length = 703 Score = 87.3 bits (215), Expect = 1e-15, Method: Composition-based stats. Identities = 24/152 (15%), Positives = 51/152 (33%), Gaps = 19/152 (12%) Query: 46 KHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQK----------AFPQGRT 93 K+ L+ ++ + I++ F + L LQ + Sbjct: 553 DESIVTSSGKMLLLDRLVPCLLSKGHKILLFSQFKTQLDILQDWAYLRDWNCCRIDGAVS 612 Query: 94 LDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIG 152 I +N + + + G G+NL + ++ + W+ ++ Q Sbjct: 613 QVDRQAQIYAFNTDSNYKIFLLSTRAGGQGINLT-AADTVILYDSDWNPQQDLQA----- 666 Query: 153 VTRQRQAGFKRAVFVYYLIAQNTIDELVLQRL 184 R + G + V VY L + T+++ L L Sbjct: 667 QDRAHRIGQTKPVLVYRLATRGTVEQRSLSGL 698 >gi|260834763|ref|XP_002612379.1| hypothetical protein BRAFLDRAFT_218963 [Branchiostoma floridae] gi|229297756|gb|EEN68388.1| hypothetical protein BRAFLDRAFT_218963 [Branchiostoma floridae] Length = 1849 Score = 87.3 bits (215), Expect = 1e-15, Method: Composition-based stats. Identities = 24/147 (16%), Positives = 53/147 (36%), Gaps = 18/147 (12%) Query: 65 KANAAPIIVAYHFNSDLARLQKAFPQ---------GRTL-DKDPCTIQEWNEGKIP--LL 112 +A +++ L L+ Q GR + I +++ + Sbjct: 481 RAGGHKVLIFSQMVRCLDILEDYLVQNVYPYERIDGRVRGNLRQAAIDRFSKPDSDRFVF 540 Query: 113 FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIA 172 + G G+NL + ++ F W+ + Q R + G ++V VY L+ Sbjct: 541 LLCTRAGGLGINLT-AADTVIIFDSDWNPQNDLQAQARC-----HRIGQSKSVKVYRLLT 594 Query: 173 QNTIDELVLQRLRTKSTIQDLLLNALK 199 + T + + R K + +L +++ Sbjct: 595 RATYERDMFDRASLKLGLDKAVLQSMR 621 >gi|330918828|ref|XP_003298357.1| hypothetical protein PTT_09071 [Pyrenophora teres f. teres 0-1] gi|330929981|ref|XP_003302841.1| hypothetical protein PTT_14820 [Pyrenophora teres f. teres 0-1] gi|330929988|ref|XP_003302844.1| hypothetical protein PTT_14823 [Pyrenophora teres f. teres 0-1] gi|311321519|gb|EFQ89060.1| hypothetical protein PTT_14823 [Pyrenophora teres f. teres 0-1] gi|311321523|gb|EFQ89063.1| hypothetical protein PTT_14820 [Pyrenophora teres f. teres 0-1] gi|311328454|gb|EFQ93547.1| hypothetical protein PTT_09071 [Pyrenophora teres f. teres 0-1] Length = 1129 Score = 87.3 bits (215), Expect = 1e-15, Method: Composition-based stats. Identities = 35/158 (22%), Positives = 56/158 (35%), Gaps = 23/158 (14%) Query: 53 DEKIKALEVII-----EKANAAPIIVAYHFNSDLARL-----QKAFPQGRTLDKDPCTIQ 102 K +AL + E+ NA + V F S L + + P R ++ Sbjct: 958 SAKTQALLGYLRKTRKEEPNAKTV-VFSQFTSFLDLIEPALTRDHIPFLRFDGSISQKVR 1016 Query: 103 EW------NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 + + +L + G GLNL N + WW Q I+R+ Sbjct: 1017 AQILTEFTSSPRPYVLLLSLRAGGVGLNLTC-ANKVFMMDPWWSFAVEAQAIDRV----- 1070 Query: 157 RQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 + G +R V V Q +I+E +L+ K I L Sbjct: 1071 HRMGQEREVKVVRFCVQGSIEEKMLRIQERKKFIASSL 1108 >gi|307105038|gb|EFN53289.1| hypothetical protein CHLNCDRAFT_136932 [Chlorella variabilis] Length = 1383 Score = 87.3 bits (215), Expect = 1e-15, Method: Composition-based stats. Identities = 36/194 (18%), Positives = 76/194 (39%), Gaps = 30/194 (15%) Query: 27 SKTVKCLQLAN-------GAVYYDEE----KHWKEVHDEKIKALEVIIEKANAA-PIIVA 74 + Q A+ G YYD K+ D K++ + ++ A+ ++V Sbjct: 982 ALVGPLRQAASCAYKQPTGEQYYDAATGRYKNVTYTFDSKVEKVLDVLRGKGASEKVVVF 1041 Query: 75 YHFNSDLARLQKAFPQ-----------GRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHG 122 + + L +++ P+ ++++K I ++ + F + G G Sbjct: 1042 SEYKALLQAVKRRLPELGLDSRDLLTNAKSVEKRGQAIADFQQAPPTQVFFLTHRTGGAG 1101 Query: 123 LNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQ 182 + L G + +V + +Q I R + G +RAV V LI + TI+E +++ Sbjct: 1102 VTLTAGTH-VVLCEPVLNPAFEEQAIGRCN-----RLGQQRAVTVTRLIMKGTIEEKIVE 1155 Query: 183 RLRTKSTIQDLLLN 196 ++ + D L Sbjct: 1156 YMKQRDGSTDDDLE 1169 >gi|328698146|ref|XP_001952559.2| PREDICTED: DNA excision repair protein ERCC-6 [Acyrthosiphon pisum] Length = 1136 Score = 87.3 bits (215), Expect = 1e-15, Method: Composition-based stats. Identities = 29/156 (18%), Positives = 58/156 (37%), Gaps = 19/156 (12%) Query: 53 DEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQK----------AFPQGRTLDKDPCT 100 K+ +E +++ K +++ L QK ++ Sbjct: 608 SGKMIVVEALLKMWKKQGHRVLLFTQSVKMLNIFQKFIIEQNYSYLKLEGATSIGSRQPI 667 Query: 101 IQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQA 159 I ++N + I ++ G G+NL G + ++ F W+ Q ER + Sbjct: 668 INKFNKDPSIFVMILTTKVGGLGVNL-IGADRVIIFDPDWNPATDLQARERAW-----RI 721 Query: 160 GFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 G +V +Y L+ TI+E + R K + + +L Sbjct: 722 GQTNSVTIYRLLTAGTIEEKIYHRQIFKQFLSNKVL 757 >gi|302819150|ref|XP_002991246.1| hypothetical protein SELMODRAFT_429595 [Selaginella moellendorffii] gi|300140957|gb|EFJ07674.1| hypothetical protein SELMODRAFT_429595 [Selaginella moellendorffii] Length = 1551 Score = 87.3 bits (215), Expect = 1e-15, Method: Composition-based stats. Identities = 28/133 (21%), Positives = 52/133 (39%), Gaps = 17/133 (12%) Query: 69 APIIVAYHFNSDLA----RLQKAFPQGRTLD-------KDPCTIQEWNEGKIPLLFAHPA 117 +V + S L RL+KA + R LD +D + + ++ ++ Sbjct: 979 EKALVFSQWTSLLDLVEPRLEKAGLEFRRLDGTMSVMERDAAVCEFNEKPEVSVMLMGLK 1038 Query: 118 SCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 GLN+ ++L+ +WW+ Q I+R + G R V V + TI+ Sbjct: 1039 VGSLGLNMVAACHVLLL-DVWWNPTVEDQAIDR-----AHRIGQTRDVHVTRFTVKKTIE 1092 Query: 178 ELVLQRLRTKSTI 190 + +L K + Sbjct: 1093 DRILALQEQKKQM 1105 >gi|156036384|ref|XP_001586303.1| hypothetical protein SS1G_12881 [Sclerotinia sclerotiorum 1980] gi|154698286|gb|EDN98024.1| hypothetical protein SS1G_12881 [Sclerotinia sclerotiorum 1980 UF-70] Length = 1207 Score = 87.3 bits (215), Expect = 1e-15, Method: Composition-based stats. Identities = 31/162 (19%), Positives = 63/162 (38%), Gaps = 19/162 (11%) Query: 39 AVYYDEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRT--- 93 + + K + K+ AL ++ K N +++ F+ L L+ + Sbjct: 952 CIKSFDVKKNAWMDSGKVSALVELVTKYKENGDRVLIFSQFSLVLDILESVLNTTKITYT 1011 Query: 94 -------LDKDPCTIQEWNEG-KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQ 145 +D+ I+ + + I + G G+NL Y N ++ F ++ ++ Sbjct: 1012 RIDGSTKIDERQAYIERFRDDADITAFLLTTKAGGTGINLMY-ANKVIIFDGSFNPQDDV 1070 Query: 146 QMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTK 187 Q R + G R V V L+ + TI+E + + R+K Sbjct: 1071 QA-----ENRAHRVGQTRDVEVVRLVTKGTIEEAIWKMGRSK 1107 >gi|157870828|ref|XP_001683964.1| helicase-like protein [Leishmania major strain Friedlin] gi|68127031|emb|CAJ05517.1| putative helicase-like protein [Leishmania major strain Friedlin] Length = 1043 Score = 87.3 bits (215), Expect = 1e-15, Method: Composition-based stats. Identities = 27/164 (16%), Positives = 58/164 (35%), Gaps = 20/164 (12%) Query: 51 VHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQ----------KAFPQGRTLDKDP 98 K++ L+ ++ + ++ +F + L L+ + + Sbjct: 599 DPSAKMRYLDTLLPQLKEQGHRCLIFSNFTTTLDLLEAMCHLRGHSYERLDGSCNRVERE 658 Query: 99 CTIQEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 +I +N L + G G+ L G + ++ F ++R R Sbjct: 659 LSILRYNHPASSCFLFLVTTTAGGVGVTLT-GADTVILFD-----AHFNPQLDRQAADRA 712 Query: 157 RQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKK 200 + G R V VY L Q TI+E + K+ + D ++ ++ Sbjct: 713 HRIGQARTVHVYRLCLQGTIEEHIRDIAARKAYLGDFIVEGGQR 756 >gi|296424567|ref|XP_002841819.1| hypothetical protein [Tuber melanosporum Mel28] gi|295638068|emb|CAZ86010.1| unnamed protein product [Tuber melanosporum] Length = 823 Score = 87.3 bits (215), Expect = 1e-15, Method: Composition-based stats. Identities = 31/137 (22%), Positives = 49/137 (35%), Gaps = 17/137 (12%) Query: 67 NAAPIIVAYHFNSDLARLQKAFPQGR----------TLDKDPCTIQEWN-EGKIPLLFAH 115 N +++ + L L K F +LD + E+N + + Sbjct: 433 NDDKVLIFSYSLQLLRILHKLFQSTEYNVCYFDGSMSLDDRTNVVAEFNSDPSQFVFLIS 492 Query: 116 PASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNT 175 + G GLN+ N +V F W+ Q R + G R V V+ LI T Sbjct: 493 TRAGGVGLNIT-AANKVVIFDPNWNPSYDLQA-----QDRAYRIGQTRDVEVFRLILAGT 546 Query: 176 IDELVLQRLRTKSTIQD 192 I+E+V R K + Sbjct: 547 IEEIVYARQIYKQQQAN 563 >gi|255945291|ref|XP_002563413.1| Pc20g09170 [Penicillium chrysogenum Wisconsin 54-1255] gi|211588148|emb|CAP86246.1| Pc20g09170 [Penicillium chrysogenum Wisconsin 54-1255] Length = 944 Score = 87.3 bits (215), Expect = 1e-15, Method: Composition-based stats. Identities = 27/155 (17%), Positives = 53/155 (34%), Gaps = 21/155 (13%) Query: 51 VHDEKIKALE-VIIEK---ANAAPIIVAYHFNSDLA----RLQKAFPQGRTLDKDPCTIQ 102 KI+ L + ++ ++ I+ F S L RL+ A LD Q Sbjct: 768 TSSTKIEMLLYELFQERSKSHTPKSIIFSQFTSMLQLVEWRLRHAGFNTVMLDGSMTPAQ 827 Query: 103 EWNE-------GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTR 155 + + + G LNL + + WW+ Q +R Sbjct: 828 RQKSIEYFMTKADVEVFLVSLKAGGVALNLTEASRVFI-IDPWWNPAAEWQSADR----- 881 Query: 156 QRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 + G +R V L +++++ ++Q K+ + Sbjct: 882 SHRIGQQRPCVVTRLCIEDSVESRIIQLQEKKANL 916 >gi|169614245|ref|XP_001800539.1| hypothetical protein SNOG_10260 [Phaeosphaeria nodorum SN15] gi|160707308|gb|EAT82595.2| hypothetical protein SNOG_10260 [Phaeosphaeria nodorum SN15] Length = 1073 Score = 87.3 bits (215), Expect = 1e-15, Method: Composition-based stats. Identities = 33/151 (21%), Positives = 56/151 (37%), Gaps = 21/151 (13%) Query: 53 DEKIKAL----EVIIEKANAAPIIVAYHFNSDLARLQKA----------FPQGRTLDKDP 98 K +AL + I + A +V F S L ++ A F + Sbjct: 927 SAKTQALLTHLKHIRKDDKTAKSVVFSQFTSFLDLIEPALARDHIPFLRFDGSLSQKARA 986 Query: 99 CTIQEWNEGKIP-LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 + E+ P +L + G GLNL N+ + WW Q I+R+ Sbjct: 987 HILTEFTSSPKPYVLLLSLRAGGVGLNLTCAQNVFMM-DPWWSFAVEAQAIDRV-----H 1040 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKS 188 + G +R V V + + +I+E +L+ K Sbjct: 1041 RMGQERDVRVIRFVVEGSIEEKMLRIQDRKK 1071 >gi|317149015|ref|XP_001823065.2| SNF2 family helicase [Aspergillus oryzae RIB40] Length = 924 Score = 87.3 bits (215), Expect = 1e-15, Method: Composition-based stats. Identities = 39/200 (19%), Positives = 74/200 (37%), Gaps = 25/200 (12%) Query: 5 HKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIE 64 +R+ C + I ++ + + + V D + KI+AL I+ Sbjct: 707 QVIERQHKCPMCRAEITDTSTLVEPAVEMGESTETVVADPD-----TPSSKIEALIKILT 761 Query: 65 K---ANAAPIIVAYHFNSDLARLQKAFP-----------QGRTLDKDPCTIQEWNEGKIP 110 A +V + S L L+ + +L +D T + ++ Sbjct: 762 AQGQAPGTKTVVFSQWTSFLNLLEPHLNRYGVGFARVDGKMSSLARDNSTYRFSHDPNCK 821 Query: 111 LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYL 170 +L A + C GLNL N + WW Q ++R+ + G R V+ L Sbjct: 822 VLLASLSVCSVGLNL-VAANQAILADSWWAPAIEDQAVDRV-----YRLGQTRETTVWRL 875 Query: 171 IAQNTIDELVLQRLRTKSTI 190 + +++I++ VL TK + Sbjct: 876 VMEDSIEDRVLAIQETKRKL 895 >gi|221507795|gb|EEE33382.1| helicase, putative [Toxoplasma gondii VEG] Length = 2556 Score = 87.3 bits (215), Expect = 1e-15, Method: Composition-based stats. Identities = 31/151 (20%), Positives = 60/151 (39%), Gaps = 20/151 (13%) Query: 60 EVIIEKANAA--PIIVAYHFNSDLARLQ-----KAFPQGRTLDKDPC-----TIQEWNEG 107 E +I+++ ++V F L L+ + + R I+++N Sbjct: 1204 EFVIDRSQPKAQRLLVFTQFQLVLDELEAYCHYRGWKYLRLDGSTNKFVRELDIRDFNSE 1263 Query: 108 K--IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 + + G G+NL N +V + W+ Q I+R + G +RAV Sbjct: 1264 NSTYFVYLISTRAGGLGINLT-SANHVVLYDHDWNPFIDLQAIDR-----AHRIGQQRAV 1317 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 V+ L+ + T++E + R K + LL+ Sbjct: 1318 HVWSLVNEWTVEERMAFRREQKLRLDKLLVQ 1348 >gi|221483307|gb|EEE21626.1| helicase, putative [Toxoplasma gondii GT1] Length = 2556 Score = 87.3 bits (215), Expect = 1e-15, Method: Composition-based stats. Identities = 31/151 (20%), Positives = 60/151 (39%), Gaps = 20/151 (13%) Query: 60 EVIIEKANAA--PIIVAYHFNSDLARLQ-----KAFPQGRTLDKDPC-----TIQEWNEG 107 E +I+++ ++V F L L+ + + R I+++N Sbjct: 1204 EFVIDRSQPKAQRLLVFTQFQLVLDELEAYCHYRGWKYLRLDGSTNKFVRELDIRDFNSE 1263 Query: 108 K--IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 + + G G+NL N +V + W+ Q I+R + G +RAV Sbjct: 1264 NSTYFVYLISTRAGGLGINLT-SANHVVLYDHDWNPFIDLQAIDR-----AHRIGQQRAV 1317 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 V+ L+ + T++E + R K + LL+ Sbjct: 1318 HVWSLVNEWTVEERMAFRREQKLRLDKLLVQ 1348 >gi|237839503|ref|XP_002369049.1| SNF2 family N-terminal domain containing protein [Toxoplasma gondii ME49] gi|211966713|gb|EEB01909.1| SNF2 family N-terminal domain containing protein [Toxoplasma gondii ME49] Length = 2556 Score = 87.3 bits (215), Expect = 1e-15, Method: Composition-based stats. Identities = 31/151 (20%), Positives = 60/151 (39%), Gaps = 20/151 (13%) Query: 60 EVIIEKANAA--PIIVAYHFNSDLARLQ-----KAFPQGRTLDKDPC-----TIQEWNEG 107 E +I+++ ++V F L L+ + + R I+++N Sbjct: 1204 EFVIDRSQPKAQRLLVFTQFQLVLDELEAYCHYRGWKYLRLDGSTNKFVRELDIRDFNSE 1263 Query: 108 K--IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 + + G G+NL N +V + W+ Q I+R + G +RAV Sbjct: 1264 NSTYFVYLISTRAGGLGINLT-SANHVVLYDHDWNPFIDLQAIDR-----AHRIGQQRAV 1317 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 V+ L+ + T++E + R K + LL+ Sbjct: 1318 HVWSLVNEWTVEERMAFRREQKLRLDKLLVQ 1348 >gi|114651885|ref|XP_001153391.1| PREDICTED: chromodomain helicase DNA binding protein 8 isoform 1 [Pan troglodytes] Length = 2198 Score = 87.3 bits (215), Expect = 1e-15, Method: Composition-based stats. Identities = 29/177 (16%), Positives = 62/177 (35%), Gaps = 20/177 (11%) Query: 36 ANGAVYYDEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRT 93 A + +D K+ ++ ++ K A +++ L L+ Q R Sbjct: 732 ACHIIPHDFHLQAMVRSAGKLVLIDKLLPKLKAGGHKVLIFSQMVRCLDILEDYLIQRRY 791 Query: 94 L----------DKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDL 141 L + I +++ + + G G+NL + + F W+ Sbjct: 792 LYERIDGRVRGNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLT-AADTCIIFDSDWNP 850 Query: 142 EEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNAL 198 + Q R + G +AV VY LI +N+ + + + K + +L ++ Sbjct: 851 QNDLQAQARC-----HRIGQSKAVKVYRLITRNSYEREMFDKASLKLGLDKAVLQSM 902 >gi|308160977|gb|EFO63440.1| Transcriptional regulator ATRX, putative [Giardia lamblia P15] Length = 1367 Score = 87.3 bits (215), Expect = 1e-15, Method: Composition-based stats. Identities = 40/176 (22%), Positives = 63/176 (35%), Gaps = 20/176 (11%) Query: 42 YDEEKHWKEVHDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAFPQGRT----LD 95 YD K +I K N ++ + L+ LD Sbjct: 645 YDLTVRSITALSSKYSLFMELITHIKNNNHRALIFCDYKLIFNILEHLLSYNDIPYLRLD 704 Query: 96 KDPCTIQE-------WN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQM 147 + E +N K L GLNL G N ++ F+ W L+ +Q Sbjct: 705 GTITDVSERDKICKSFNANKKYTALLISIKLGSMGLNLT-GANRVILFAPAWSLQIEEQA 763 Query: 148 IERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETI 203 I R + G KR V VY L NT++E ++ R K+ I ++ L+ K ++ Sbjct: 764 IAR-----AYRMGQKRNVVVYKLACINTLEEKMVVRQLQKAGIANVTLDDEKHRSV 814 >gi|290889290|gb|ADD69942.1| chromo-helicase DNA-binding protein [Zonotrichia albicollis] Length = 1785 Score = 87.3 bits (215), Expect = 1e-15, Method: Composition-based stats. Identities = 27/153 (17%), Positives = 56/153 (36%), Gaps = 21/153 (13%) Query: 68 AAPIIVAYHFNSDLARLQKAFP---------QGRTLDK-DPCTIQEWN-EGKIPL-LFAH 115 +++ L L + G + + +N EG Sbjct: 787 GNRVLIFSQMVRMLDILAEYLKYRQFPFQRLDGSIKGELRKQALDHFNAEGSEDFCFLLS 846 Query: 116 PASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNT 175 + G G+NL + +V F W+ + Q R + G K+ V +Y L+ + + Sbjct: 847 TRAGGLGINL-ASADTVVIFDSDWNPQNDLQAQAR-----AHRIGQKKQVNIYRLVTKAS 900 Query: 176 IDELVLQRLRTKSTIQDLL---LNALKKETIHV 205 ++E +L+R + K + L+ ++ K +H Sbjct: 901 VEEDILERAKKKMVLDHLVIQRMDTTGKTVLHT 933 >gi|159465629|ref|XP_001691025.1| SNF2 superfamily protein [Chlamydomonas reinhardtii] gi|158279711|gb|EDP05471.1| SNF2 superfamily protein [Chlamydomonas reinhardtii] Length = 1061 Score = 87.3 bits (215), Expect = 1e-15, Method: Composition-based stats. Identities = 37/220 (16%), Positives = 81/220 (36%), Gaps = 35/220 (15%) Query: 6 KFQRELYCDLQGENIEAFNSASKTVKCL----QL---ANGAVYYDE--------EKHWKE 50 + Q++ Y L ++++A N + K L QL N + Sbjct: 415 EMQKKWYAALLQKDVDALNGGADRAKLLNVVMQLRKCCNHPYLFQGAEPGPPFITGEHLV 474 Query: 51 VHDEKIKALEVIIEKANAA--PIIVAYHFNSDLARLQ---------KAFPQGRTLDK-DP 98 + K+ L+ ++ + +++ + L+ G T + Sbjct: 475 ENSGKLVLLDKLLPRLKERESRVLIFSQMTRMIDILEDYCLYRGYGYCRIDGNTDGEARD 534 Query: 99 CTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 I E+N + + G G+NL +I+V + W+ + Q ++R Sbjct: 535 NMIDEFNRPNSSKFIFLLSTRAGGLGINL-ATADIVVLYDSDWNPQMDLQAMDR-----A 588 Query: 157 RQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + G K+ V V+ +N+I+E V+++ K + L++ Sbjct: 589 HRIGQKKEVQVFRFCIENSIEEKVIEKAYKKLRLDALVIQ 628 >gi|327266997|ref|XP_003218289.1| PREDICTED: helicase-like transcription factor-like [Anolis carolinensis] Length = 978 Score = 87.3 bits (215), Expect = 1e-15, Method: Composition-based stats. Identities = 30/169 (17%), Positives = 59/169 (34%), Gaps = 25/169 (14%) Query: 42 YDEEKHWKE--VHDEKIKALE-VIIEKANAAPI---IVAYHFNSDLARLQKAFPQGR--- 92 D + + V KI AL +IE P ++ F L+ ++ + Sbjct: 792 SDSGRKTDQGWVSSSKINALMHALIELRKQNPTVKSLIISQFTKFLSLIEIPLKESGFAF 851 Query: 93 -------TLDKDPCTIQEWNEGKI---PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLE 142 T K I+ + + ++ + G GLNL + + W+ Sbjct: 852 TRLDGSMTRKKRVEAIRHFQSNETGSPTVMLLSLKAGGVGLNLT-AASRVFLMDPAWNPA 910 Query: 143 EHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQ 191 Q +R + G K+ V + I +N+++E +L+ K + Sbjct: 911 AEDQCFDRC-----HRLGQKQDVIITKFIVKNSVEENMLKIQHKKRELA 954 >gi|303271765|ref|XP_003055244.1| SNF2 super family [Micromonas pusilla CCMP1545] gi|226463218|gb|EEH60496.1| SNF2 super family [Micromonas pusilla CCMP1545] Length = 481 Score = 87.3 bits (215), Expect = 1e-15, Method: Composition-based stats. Identities = 33/166 (19%), Positives = 57/166 (34%), Gaps = 28/166 (16%) Query: 52 HDEKIKA-LEVIIEKANAAPII-----------VAYHFNSDLARLQKAFPQGRT------ 93 + KI+A LE + AAP++ + F + L + Sbjct: 216 NSAKIRAVLEQLDATRAAAPVVDGRRTRPEQTVLFSQFTTFLDIVGPKIEDAGHSVLRLD 275 Query: 94 ----LDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIE 149 L K +Q + G+ +L + GLNL N ++ WW+ Q I+ Sbjct: 276 GTQGLPKRAAIVQAFRRGEATVLLVSLKAASLGLNLNCANN-VILVDPWWNAAIEDQAID 334 Query: 150 RIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 R + G + V V LI +++ + K I + L Sbjct: 335 RC-----HRIGQTKEVKVTRLIVSESVELRIQALQERKRAIFNAAL 375 >gi|1448983|gb|AAC37264.1| chromodomain-helicase-DNA-binding protein [Drosophila melanogaster] Length = 1883 Score = 87.3 bits (215), Expect = 1e-15, Method: Composition-based stats. Identities = 29/173 (16%), Positives = 63/173 (36%), Gaps = 20/173 (11%) Query: 40 VYYDEEKHWKEVHDEKIKALEVIIEKAN--AAPIIVAYHFNSDLARL-----QKAFPQGR 92 + DE K+ L+ ++ + +++ L L ++ FP R Sbjct: 822 LQQDEALQTLLKGSGKLVLLDKLLCRLKETGHRVLIFSQMVRMLDVLADYLQKRHFPFQR 881 Query: 93 TLDK-----DPCTIQEWN-EGKIPL-LFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQ 145 + +N EG + G G+NL + ++ F W+ + Sbjct: 882 LDGSIKGEMRRQALDHFNAEGSQDFCFLLSTRAGGLGINL-ATADTVIIFDSDWNPQNDL 940 Query: 146 QMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNAL 198 Q R + G K V +Y L+ +++E +++R + K + L++ + Sbjct: 941 QAQAR-----AHRIGQKNQVNIYRLVTARSVEEQIVERAKQKMVLDHLVIQRM 988 >gi|17137266|ref|NP_477197.1| Chromodomain-helicase-DNA-binding protein 1 [Drosophila melanogaster] gi|75009913|sp|Q7KU24|CHD1_DROME RecName: Full=Chromodomain-helicase-DNA-binding protein 1; Short=CHD-1; AltName: Full=ATP-dependent helicase Chd1 gi|7295870|gb|AAF51170.1| Chromodomain-helicase-DNA-binding protein 1 [Drosophila melanogaster] Length = 1883 Score = 87.3 bits (215), Expect = 1e-15, Method: Composition-based stats. Identities = 29/173 (16%), Positives = 63/173 (36%), Gaps = 20/173 (11%) Query: 40 VYYDEEKHWKEVHDEKIKALEVIIEKAN--AAPIIVAYHFNSDLARL-----QKAFPQGR 92 + DE K+ L+ ++ + +++ L L ++ FP R Sbjct: 822 LQQDEALQTLLKGSGKLVLLDKLLCRLKETGHRVLIFSQMVRMLDVLADYLQKRHFPFQR 881 Query: 93 TLDK-----DPCTIQEWN-EGKIPL-LFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQ 145 + +N EG + G G+NL + ++ F W+ + Sbjct: 882 LDGSIKGEMRRQALDHFNAEGSQDFCFLLSTRAGGLGINL-ATADTVIIFDSDWNPQNDL 940 Query: 146 QMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNAL 198 Q R + G K V +Y L+ +++E +++R + K + L++ + Sbjct: 941 QAQAR-----AHRIGQKNQVNIYRLVTARSVEEQIVERAKQKMVLDHLVIQRM 988 >gi|198452987|ref|XP_001359022.2| GA10321 [Drosophila pseudoobscura pseudoobscura] gi|198132165|gb|EAL28165.2| GA10321 [Drosophila pseudoobscura pseudoobscura] Length = 936 Score = 87.3 bits (215), Expect = 1e-15, Method: Composition-based stats. Identities = 34/153 (22%), Positives = 69/153 (45%), Gaps = 19/153 (12%) Query: 56 IKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQG--RTLD--------KDPCTIQEWN 105 I+ L+ I+E +IV + S L +++ + +TLD + ++++N Sbjct: 768 IQKLQSILEGTTDK-VIVVSQWTSFLDIIREYLNEHDWQTLDFNGKMDATEREVVLKDFN 826 Query: 106 --EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKR 163 + +L S G GLNL N L+ L W+ + +Q +RI + G ++ Sbjct: 827 VVQNSKRILLLSLTSGGVGLNLNV-ANHLLLVDLHWNPQLERQAQDRI-----YRYGQQK 880 Query: 164 AVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 F+Y + Q+T+++ + K I +++L Sbjct: 881 PTFIYRFMCQDTVEQRIKALQDYKLEIANVVLQ 913 >gi|190408727|gb|EDV11992.1| DNA repair protein RAD16 [Saccharomyces cerevisiae RM11-1a] gi|207347673|gb|EDZ73768.1| YBR114Wp-like protein [Saccharomyces cerevisiae AWRI1631] gi|256270306|gb|EEU05519.1| Rad16p [Saccharomyces cerevisiae JAY291] gi|290878128|emb|CBK39187.1| Rad16p [Saccharomyces cerevisiae EC1118] Length = 790 Score = 87.3 bits (215), Expect = 1e-15, Method: Composition-based stats. Identities = 29/169 (17%), Positives = 60/169 (35%), Gaps = 23/169 (13%) Query: 43 DEEKHWKEVHDEKIKAL-EVIIE-KANAAPI--IVAYHFNSDLARLQKAFPQG------- 91 + W+ KI+AL E + + ++N I IV F S L ++ + Sbjct: 610 NMSGKWQ--SSTKIEALVEELYKLRSNKRTIKSIVFSQFTSMLDLVEWRLKRAGFQTVKL 667 Query: 92 ----RTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQM 147 +D N + + + G LNL + + WW+ Q Sbjct: 668 QGSMSPTQRDETIKYFMNNIQCEVFLVSLKAGGVALNLCEASQVFIL-DPWWNPSVEWQS 726 Query: 148 IERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 +R+ + G R V + +++I+ +++ K+ + +N Sbjct: 727 GDRV-----HRIGQYRPVKITRFCIEDSIEARIIELQEKKANMIHATIN 770 >gi|322700580|gb|EFY92334.1| DNA repair protein rad-5 [Metarhizium acridum CQMa 102] Length = 1138 Score = 87.3 bits (215), Expect = 1e-15, Method: Composition-based stats. Identities = 29/153 (18%), Positives = 56/153 (36%), Gaps = 23/153 (15%) Query: 52 HDEKIKALEVII-----EKANAAPIIVAYHFNSDLARLQKAFPQGRTL----------DK 96 K+ AL + E+ + + V F S L+ ++ A + Sbjct: 980 SSAKVAALISELRVLRKERPHMKSV-VFSQFTSFLSLIEPALARINVKFLRLDGSMAQKA 1038 Query: 97 DPCTIQEWNEGK-IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTR 155 ++++ E K +L + G GLNL G + WW Q I+R+ Sbjct: 1039 RAAVLEDFTEKKGFMVLLISLRAGGVGLNLTSAG-RVFMMDPWWSFAVEAQAIDRV---- 1093 Query: 156 QRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKS 188 + G + V + I + +++E +L+ K Sbjct: 1094 -HRLGQEDEVVIKRFIVKQSVEERMLRVQERKK 1125 >gi|317138165|ref|XP_001816719.2| chromatin remodeling complex subunit (Chd3) [Aspergillus oryzae RIB40] Length = 1230 Score = 87.3 bits (215), Expect = 1e-15, Method: Composition-based stats. Identities = 26/161 (16%), Positives = 63/161 (39%), Gaps = 20/161 (12%) Query: 55 KIKALEVIIEKAN--AAPIIVAYHFNSDLARLQKAFPQGRTLD----------KDPCTIQ 102 K++ L++++ K +++ F +L ++ L + I Sbjct: 724 KLQLLQLMLPKLRERGHRVLIFSQFLDNLDIVEDFLDGLGLLHCRLDGRMSSLEKQKMID 783 Query: 103 EWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 ++N P S G G+NL + ++ ++ + Q + R + G Sbjct: 784 QYNAQDSPYFAFLLSTRSGGVGINL-ATADTVIIMDPDFNPHQDMQALSR-----AHRIG 837 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 K V V+ L+ + + +E ++Q + K + +L++ + E Sbjct: 838 QKNKVLVFQLMTRGSAEEKIMQIGKKKMVLDHVLIDRMVSE 878 >gi|301117486|ref|XP_002906471.1| chromodomain-helicase-DNA-binding protein, putative [Phytophthora infestans T30-4] gi|262107820|gb|EEY65872.1| chromodomain-helicase-DNA-binding protein, putative [Phytophthora infestans T30-4] Length = 2158 Score = 87.3 bits (215), Expect = 1e-15, Method: Composition-based stats. Identities = 26/141 (18%), Positives = 51/141 (36%), Gaps = 18/141 (12%) Query: 67 NAAPIIVAYHFNSDLARLQKA---------FPQGRTLDKDPC-TIQEWNEG--KIPLLFA 114 + I++ F L L++ G T I ++ K + Sbjct: 1218 DGHKILIFSQFLKQLDLLERYCEANSFVFERLDGSTGGSVRQSAIDRFSRPHSKSFIFLL 1277 Query: 115 HPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQN 174 + G G+NL + ++ F W+ Q R + G K++V +Y L+ +N Sbjct: 1278 STKAGGVGINL-IAADTVIIFDSDWNPMNDLQAQSRC-----HRIGQKKSVQIYRLVTRN 1331 Query: 175 TIDELVLQRLRTKSTIQDLLL 195 T + + R K ++ +L Sbjct: 1332 TYESEMFDRASRKLGLEHAVL 1352 >gi|45184972|ref|NP_982690.1| AAR147Wp [Ashbya gossypii ATCC 10895] gi|44980593|gb|AAS50514.1| AAR147Wp [Ashbya gossypii ATCC 10895] Length = 1580 Score = 87.3 bits (215), Expect = 1e-15, Method: Composition-based stats. Identities = 25/150 (16%), Positives = 62/150 (41%), Gaps = 18/150 (12%) Query: 59 LEVIIEKANAAPIIVAYHFNSDLARLQKAFPQG---------RTLDK--DPCTIQEWNEG 107 ++ +++ + +IV F + LQ + T++ I+ + Sbjct: 1409 IKTVLDNSTDEKLIVFSQFTTFFDILQFFIKKVLNVSYLRYDGTMNGNVRASVIERFYRE 1468 Query: 108 KIP-LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVF 166 K LL + GL L N ++ +W+ +Q ++R + +R V+ Sbjct: 1469 KNERLLLISMKAGNSGLTLTC-ANHVILVDPFWNPYVEEQAMDRC-----YRISQQREVY 1522 Query: 167 VYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 ++ L+ +NTI++ +++ K T+ + ++ Sbjct: 1523 IHRLLLKNTIEDRIVELQNRKRTLVENAMD 1552 >gi|3413850|dbj|BAA32289.1| KIAA0444 protein [Homo sapiens] Length = 978 Score = 87.3 bits (215), Expect = 1e-15, Method: Composition-based stats. Identities = 22/160 (13%), Positives = 54/160 (33%), Gaps = 20/160 (12%) Query: 45 EKHWKEVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQ----------KAFPQGR 92 + K+ L+ +++K +++ L L+ + G Sbjct: 39 DGSSLVKSSGKLMLLQKMLKKLRDEGHRVLIFSQMTKMLDLLEDFLEYEGYKYERIDGGI 98 Query: 93 TLDKDPCTIQEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 T I +N + + G G+NL + ++ + W+ Q Sbjct: 99 TGGLRQEAIDRFNAPGAQQFCFLLSTRAGGLGINL-ATADTVIIYDSDWNPHNDIQA--- 154 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 +R + G + V +Y + + +++E + Q + K + Sbjct: 155 --FSRAHRIGQNKKVMIYRFVTRASVEERITQVAKRKMML 192 >gi|291239125|ref|XP_002739475.1| PREDICTED: kismet-like, partial [Saccoglossus kowalevskii] Length = 1069 Score = 87.3 bits (215), Expect = 1e-15, Method: Composition-based stats. Identities = 32/206 (15%), Positives = 69/206 (33%), Gaps = 38/206 (18%) Query: 8 QRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKAN 67 + ++ D N + + +Q A V D + + L+ Sbjct: 83 EEQIMLDFPEN-----NYLRQLLALIQSAGKMVLID----------KLLPKLKE-----G 122 Query: 68 AAPIIVAYHFNSDLARL-----QKAFPQGRTLDK-----DPCTIQEWNEGKIP--LLFAH 115 +++ L L QK +P R + I +++ + Sbjct: 123 GHKVLIFSQMVKCLDILEDYLLQKRYPYERIDGRVRGNLRQAAIDRFSKPDSDRFVFLLC 182 Query: 116 PASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNT 175 + G G+NL + ++ F W+ + Q R + G + V VY LI +N+ Sbjct: 183 TRAGGLGINLT-AADTVIIFDSDWNPQNDLQAQARC-----HRIGQSKLVKVYRLITRNS 236 Query: 176 IDELVLQRLRTKSTIQDLLLNALKKE 201 + + R K + +L +++ + Sbjct: 237 YEREMFDRASLKLGLDKAVLQSMRHQ 262 >gi|260174930|ref|ZP_05761342.1| helicase domain-containing protein [Bacteroides sp. D2] gi|315923171|ref|ZP_07919411.1| conserved hypothetical protein [Bacteroides sp. D2] gi|313697046|gb|EFS33881.1| conserved hypothetical protein [Bacteroides sp. D2] Length = 557 Score = 87.3 bits (215), Expect = 1e-15, Method: Composition-based stats. Identities = 41/209 (19%), Positives = 77/209 (36%), Gaps = 35/209 (16%) Query: 2 KQYHKFQRELYC------DLQGENIEAF---NSASKTVKCLQLANGAVYYDEEKHWKEVH 52 K+Y +R+L D E IE + Q++ + Sbjct: 340 KEYVDAERDLIMYLQKYKDADDEKIEKALRGEVMVRINILRQIS-----------ARGKV 388 Query: 53 DEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQG-RTLDKDPCTIQE------WN 105 + I+ ++ E N II+ + + +L++ FP +D +++ N Sbjct: 389 RDVIEFVKDFRE--NGKKIILFCSLHEVVDQLKRYFPTAVSVTGRDSQDVKQRAVDAFQN 446 Query: 106 EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 K ++ + G GL L N + F W + Q +R + G K +V Sbjct: 447 NPKTDIIICSIKAAGVGLTLTASSN-VAFVEFPWTYADCCQCEDR-----AHRIGQKDSV 500 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 YY + + TIDE V + ++ K I + + Sbjct: 501 TCYYFLGRRTIDEKVYRIIQEKKNIANAV 529 >gi|281211051|gb|EFA85217.1| myb domain-containing protein [Polysphondylium pallidum PN500] Length = 1186 Score = 87.3 bits (215), Expect = 1e-15, Method: Composition-based stats. Identities = 30/218 (13%), Positives = 79/218 (36%), Gaps = 31/218 (14%) Query: 4 YHKFQRELYCDLQGENIEAFNSASKTVK-CLQL--ANGAVYYDEEKHWKEV--------H 52 Y + + + L G ++ + K + C+QL A Y + + + Sbjct: 434 YKRLLSKDFEALHGVGVKGSSGRVKLLNICMQLRKACNHPYLFDGAEEQPYTTGDHLINN 493 Query: 53 DEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQK----------AFPQGRTLDKDPCT 100 K+ L+ ++ + + +++ + L L+ Sbjct: 494 SGKMVLLDKLLGRLKQRGSRVLIFSQWARMLDILEDYLLYRDYSYCRIDGSTDSQTRENY 553 Query: 101 IQEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQ 158 I+ +NE K + + G G+ L ++++ F W+ + Q R + Sbjct: 554 IESFNEPGSKHFVFILTTRAGGLGITL-NTADVVILFDSDWNPQMDLQA-----QDRAHR 607 Query: 159 AGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 G + V VY + +++++E ++++ K + +++ Sbjct: 608 IGQTKPVTVYRFVTESSMEEKMVEKAELKLQLDAVVIQ 645 >gi|260812970|ref|XP_002601193.1| hypothetical protein BRAFLDRAFT_183803 [Branchiostoma floridae] gi|229286484|gb|EEN57205.1| hypothetical protein BRAFLDRAFT_183803 [Branchiostoma floridae] Length = 964 Score = 87.3 bits (215), Expect = 1e-15, Method: Composition-based stats. Identities = 21/138 (15%), Positives = 46/138 (33%), Gaps = 18/138 (13%) Query: 65 KANAAPIIVAYHFNSDLARLQ----------KAFPQGRTLDKDPCTIQEWNEGKIP--LL 112 +A +++ L L+ + G T I +N P + Sbjct: 614 QAQGHRVLIFSQMTKMLDILEDFCEAEGYKYERIDGGVTGTLRQDAIDRFNAPGSPHFVF 673 Query: 113 FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIA 172 + G G+NL + + + W+ Q +R + G V +Y + Sbjct: 674 LLSTRAGGLGINL-ATADTVFIYDSDWNPHNDIQA-----FSRAHRIGQANKVMIYRFVT 727 Query: 173 QNTIDELVLQRLRTKSTI 190 + +++E + Q + K + Sbjct: 728 RASVEERITQVAKKKMML 745 >gi|195166785|ref|XP_002024215.1| GL22908 [Drosophila persimilis] gi|194107570|gb|EDW29613.1| GL22908 [Drosophila persimilis] Length = 1898 Score = 87.3 bits (215), Expect = 1e-15, Method: Composition-based stats. Identities = 28/171 (16%), Positives = 60/171 (35%), Gaps = 23/171 (13%) Query: 34 QLANGAVYYDEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQ------ 85 Q A G +Y E + K+ L ++ + + +++ L L+ Sbjct: 899 QTAAGGLY---EINSLTKAAGKLVLLSKMLRQLKSQNHRVLIFSQMTKMLDILEDFLEGE 955 Query: 86 ----KAFPQGRTLDKDPCTIQEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWW 139 + G T I +N + + + G G+NL + ++ + W Sbjct: 956 QYKYERIDGGITGTVRQEAIDRFNAPGAQQFVFLLSTRAGGLGINL-ATADTVIIYDSDW 1014 Query: 140 DLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 + Q +R + G V +Y + +N+++E V Q + K + Sbjct: 1015 NPHNDIQA-----FSRAHRIGQANKVMIYRFVTRNSVEERVTQVAKRKMML 1060 >gi|194855230|ref|XP_001968500.1| GG24470 [Drosophila erecta] gi|190660367|gb|EDV57559.1| GG24470 [Drosophila erecta] Length = 1886 Score = 87.3 bits (215), Expect = 1e-15, Method: Composition-based stats. Identities = 29/173 (16%), Positives = 63/173 (36%), Gaps = 20/173 (11%) Query: 40 VYYDEEKHWKEVHDEKIKALEVIIEKAN--AAPIIVAYHFNSDLARL-----QKAFPQGR 92 + DE K+ L+ ++ + +++ L L ++ FP R Sbjct: 822 LQQDEALQTLLKGSGKLVLLDKLLCRLKETGHRVLIFSQMVRMLDVLADYLQKRHFPFQR 881 Query: 93 TLDK-----DPCTIQEWN-EGKIPL-LFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQ 145 + +N EG + G G+NL + ++ F W+ + Sbjct: 882 LDGSIKGEMRRQALDHFNAEGSQDFCFLLSTRAGGLGINL-ATADTVIIFDSDWNPQNDL 940 Query: 146 QMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNAL 198 Q R + G K V +Y L+ +++E +++R + K + L++ + Sbjct: 941 QAQAR-----AHRIGQKNQVNIYRLVTARSVEEQIVERAKQKMVLDHLVIQRM 988 >gi|300175679|emb|CBK21222.2| unnamed protein product [Blastocystis hominis] Length = 523 Score = 87.3 bits (215), Expect = 1e-15, Method: Composition-based stats. Identities = 22/141 (15%), Positives = 52/141 (36%), Gaps = 18/141 (12%) Query: 68 AAPIIVAYHFNSDLARLQK----------AFPQGRTLDKDPCTIQEWNEGKIP--LLFAH 115 + +++ L L+ I +N + Sbjct: 323 GSRVLLFSQMRRVLDILEDYCNIRGFEYCRIDGSTESVDREEEINSFNAENSTKFVFLLS 382 Query: 116 PASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNT 175 + G G+NL + ++ + W+ + Q +R + G K+ V VY L+ + T Sbjct: 383 TRAGGLGINL-ATADTVILYDSDWNPQMDLQAEDR-----AHRIGQKKTVNVYRLVTEGT 436 Query: 176 IDELVLQRLRTKSTIQDLLLN 196 ++E++++R + K + L++ Sbjct: 437 VEEMIVERAKLKLRLDTLVIQ 457 >gi|198466497|ref|XP_002135204.1| GA23929 [Drosophila pseudoobscura pseudoobscura] gi|198150627|gb|EDY73831.1| GA23929 [Drosophila pseudoobscura pseudoobscura] Length = 2036 Score = 87.3 bits (215), Expect = 1e-15, Method: Composition-based stats. Identities = 28/171 (16%), Positives = 60/171 (35%), Gaps = 23/171 (13%) Query: 34 QLANGAVYYDEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQ------ 85 Q A G +Y E + K+ L ++ + + +++ L L+ Sbjct: 1041 QTAAGGLY---EINSLTKAAGKLVLLSKMLRQLKSQNHRVLIFSQMTKMLDILEDFLEGE 1097 Query: 86 ----KAFPQGRTLDKDPCTIQEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWW 139 + G T I +N + + + G G+NL + ++ + W Sbjct: 1098 QYKYERIDGGITGTVRQEAIDRFNAPGAQQFVFLLSTRAGGLGINL-ATADTVIIYDSDW 1156 Query: 140 DLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 + Q +R + G V +Y + +N+++E V Q + K + Sbjct: 1157 NPHNDIQA-----FSRAHRIGQANKVMIYRFVTRNSVEERVTQVAKRKMML 1202 >gi|73977360|ref|XP_864115.1| PREDICTED: similar to Chromodomain-helicase-DNA-binding protein 8 (CHD-8) (Helicase with SNF2 domain 1) isoform 3 [Canis familiaris] Length = 1934 Score = 87.3 bits (215), Expect = 1e-15, Method: Composition-based stats. Identities = 29/177 (16%), Positives = 62/177 (35%), Gaps = 20/177 (11%) Query: 36 ANGAVYYDEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRT 93 A + +D K+ ++ ++ K A +++ L L+ Q R Sbjct: 466 ACHIIPHDFHLQAMVRSAGKLVLIDKLLPKLKAGGHKVLIFSQMVRCLDILEDYLIQRRY 525 Query: 94 L----------DKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDL 141 L + I +++ + + G G+NL + + F W+ Sbjct: 526 LYERIDGRVRGNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLT-AADTCIIFDSDWNP 584 Query: 142 EEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNAL 198 + Q R + G +AV VY LI +N+ + + + K + +L ++ Sbjct: 585 QNDLQAQARC-----HRIGQSKAVKVYRLITRNSYEREMFDKASLKLGLDKAVLQSM 636 >gi|255561188|ref|XP_002521606.1| ISWI chromatin remodeling complex ATPase ISW1, putative [Ricinus communis] gi|223539284|gb|EEF40877.1| ISWI chromatin remodeling complex ATPase ISW1, putative [Ricinus communis] Length = 788 Score = 87.3 bits (215), Expect = 1e-15, Method: Composition-based stats. Identities = 22/140 (15%), Positives = 54/140 (38%), Gaps = 18/140 (12%) Query: 68 AAPIIVAYHFNSDLARLQKAFPQ----------GRTLDKDPCTIQEWNE--GKIPLLFAH 115 +++ + L + F + LD+ I+E+N + Sbjct: 558 KHKVLIFSQWTKILDIMDYYFSEKGLEVCRIDGSVKLDERKRQIEEFNNVDSNYRIFLLS 617 Query: 116 PASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNT 175 + G G+NL + + + W+ + Q ++R + G + V VY L + Sbjct: 618 TRAGGLGINLT-AADTCILYDSDWNPQMDLQAMDRC-----HRIGQTKPVHVYRLATAQS 671 Query: 176 IDELVLQRLRTKSTIQDLLL 195 ++ +L+R +K ++ +++ Sbjct: 672 VEGRILKRAFSKLKLEHVVI 691 >gi|154284692|ref|XP_001543141.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1] gi|150406782|gb|EDN02323.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1] Length = 214 Score = 87.3 bits (215), Expect = 1e-15, Method: Composition-based stats. Identities = 26/111 (23%), Positives = 49/111 (44%), Gaps = 7/111 (6%) Query: 87 AFPQGRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQ 145 K + ++N + +L + G GLNL G + ++F W+ ++ Sbjct: 24 RLDGSVEATKRQSIVNQFNTDPSYDVLLLTTSVGGLGLNLT-GADTVIFVEHDWNPQKDI 82 Query: 146 QMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 Q ++R + G K+ V VY LI + T++E +L R K + ++N Sbjct: 83 QAMDR-----AHRIGQKKVVNVYRLITRGTLEEKILNLQRFKIDVASTVVN 128 >gi|149638830|ref|XP_001506039.1| PREDICTED: similar to RAD54B protein [Ornithorhynchus anatinus] Length = 883 Score = 87.3 bits (215), Expect = 1e-15, Method: Composition-based stats. Identities = 34/172 (19%), Positives = 69/172 (40%), Gaps = 23/172 (13%) Query: 50 EVHDEKIKALEVII----EKANAAPIIVAYHFNSDLARLQK----------AFPQGRTLD 95 EV K++ L ++ E + + +++ ++ L LQ+ + Sbjct: 537 EVDSGKLRVLIKLLAVIRELSPSEKVVLVSNYTQTLTILQEICKRYGYAHTRLDGQTPIS 596 Query: 96 KDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGV 153 + I +N P + + G GG+ L+ + + W+ Q + R+ Sbjct: 597 QRQHIIDGFNSKHSPDFVFLLSSKAGGV-GLNLVGGSHLILYDIDWNPATDIQAMARVW- 654 Query: 154 TRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKK-ETIH 204 + G KR V +Y L+ TI+E + QR +K ++ +++ K E IH Sbjct: 655 ----RDGQKRPVHIYRLLTTGTIEEKIYQRQISKQSLSGTVVDLTKASEHIH 702 >gi|189515794|ref|XP_697956.3| PREDICTED: chromodomain-helicase-DNA-binding protein 7 [Danio rerio] Length = 3094 Score = 87.3 bits (215), Expect = 1e-15, Method: Composition-based stats. Identities = 23/146 (15%), Positives = 52/146 (35%), Gaps = 18/146 (12%) Query: 65 KANAAPIIVAYHFNSDLAR-----LQKAFPQGRTLDK-----DPCTIQEWNEGKIP--LL 112 KA +++ L +Q+ +P R + I ++ + Sbjct: 1355 KAGGHRVLIFSQMVRCLDILEDYLIQRRYPYERIDGRVRGNLRQAAIDRFSRPDSDRFVF 1414 Query: 113 FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIA 172 + G G+NL + + F W+ + Q R + G ++V +Y LI Sbjct: 1415 LLCTRAGGLGINLT-AADTCIIFDSDWNPQNDLQAQARC-----HRIGQSKSVKIYRLIT 1468 Query: 173 QNTIDELVLQRLRTKSTIQDLLLNAL 198 +N+ + + + K + +L ++ Sbjct: 1469 RNSYEREMFDKASLKLGLDKAVLQSM 1494 >gi|328772759|gb|EGF82797.1| hypothetical protein BATDEDRAFT_9561 [Batrachochytrium dendrobatidis JAM81] Length = 912 Score = 87.3 bits (215), Expect = 1e-15, Method: Composition-based stats. Identities = 25/140 (17%), Positives = 50/140 (35%), Gaps = 17/140 (12%) Query: 67 NAAPIIVAYHFNSDLARLQK----------AFPQGRTLDKDPCTIQEWNEGK-IPLLFAH 115 +++ L L+ ++ + + +NE + + Sbjct: 618 QGHRVLLFCQTRQMLDILELFIKNEGYAYLRMDGSTSIQQRSKIVDCYNEDESYFVFLLT 677 Query: 116 PASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNT 175 G G+NL N ++ F W+ Q ER + G K++V +Y L+ T Sbjct: 678 TKVGGLGINLT-SANRVIIFDPDWNPSTDMQARERAW-----RLGQKKSVTIYRLMTSGT 731 Query: 176 IDELVLQRLRTKSTIQDLLL 195 I+E + R K + + +L Sbjct: 732 IEEKIYHRQIFKQFLTNKIL 751 >gi|115939069|ref|XP_001193731.1| PREDICTED: similar to chromodomain helicase DNA binding protein 5, partial [Strongylocentrotus purpuratus] Length = 2038 Score = 87.3 bits (215), Expect = 1e-15, Method: Composition-based stats. Identities = 19/136 (13%), Positives = 46/136 (33%), Gaps = 18/136 (13%) Query: 67 NAAPIIVAYHFNSDLARLQ----------KAFPQGRTLDKDPCTIQEWNEG--KIPLLFA 114 + +++ L L+ + G T I +N + + Sbjct: 1037 DNHRVLIFSQMTRMLDLLEDFLEGEGYKYERIDGGVTGGLRQEAIDRFNAPGAEQFVFLL 1096 Query: 115 HPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQN 174 + G G+NL + ++ + W+ Q +R + G V +Y + + Sbjct: 1097 STRAGGLGINL-ATADTVIIYDSDWNPHNDIQA-----FSRAHRIGQSNKVMIYRFVTRA 1150 Query: 175 TIDELVLQRLRTKSTI 190 +++E + Q + K + Sbjct: 1151 SVEERITQVAKKKMML 1166 >gi|323305950|gb|EGA59685.1| Rad16p [Saccharomyces cerevisiae FostersB] Length = 765 Score = 87.3 bits (215), Expect = 1e-15, Method: Composition-based stats. Identities = 29/169 (17%), Positives = 60/169 (35%), Gaps = 23/169 (13%) Query: 43 DEEKHWKEVHDEKIKAL-EVIIE-KANAAPI--IVAYHFNSDLARLQKAFPQG------- 91 + W+ KI+AL E + + ++N I IV F S L ++ + Sbjct: 585 NMSGKWQ--SSTKIEALVEELYKLRSNKRTIKSIVFSQFTSMLDLVEWRLKRAGFQTVKL 642 Query: 92 ----RTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQM 147 +D N + + + G LNL + + WW+ Q Sbjct: 643 QGXMSPTQRDETIKYFMNNIQCEVFLVSLKAGGVALNLCEASQVFIL-DPWWNPSVEWQS 701 Query: 148 IERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 +R+ + G R V + +++I+ +++ K+ + +N Sbjct: 702 GDRV-----HRIGQYRPVKITRFCIEDSIEARIIELQEKKANMIHATIN 745 >gi|307111435|gb|EFN59669.1| hypothetical protein CHLNCDRAFT_49470 [Chlorella variabilis] Length = 1117 Score = 87.3 bits (215), Expect = 1e-15, Method: Composition-based stats. Identities = 25/142 (17%), Positives = 49/142 (34%), Gaps = 20/142 (14%) Query: 59 LEVIIEKANAAPIIVAYHFNSDLARLQKAFPQ------------GRTLDKDPCTIQEWNE 106 L+ ++ ++ L L+ A + +++ Q Sbjct: 668 LKNLV--GEGHRTLIFSQSRVMLNILESAIKEEQWRYCRIDGSVASAAEREARVRQFQTS 725 Query: 107 GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVF 166 IP+ G GL L + ++ W+ Q ++R + G KR V Sbjct: 726 HTIPIFLLTSQVGGLGLTLT-AADRVIILDPAWNPSTDNQSVDR-----AYRIGQKRDVV 779 Query: 167 VYYLIAQNTIDELVLQRLRTKS 188 VY LI+ T++E + +R + Sbjct: 780 VYRLISCGTVEENIYRRQDLRD 801 >gi|258572078|ref|XP_002544816.1| SNF2-family ATP dependent chromatin remodeling factor snf21 [Uncinocarpus reesii 1704] gi|237905086|gb|EEP79487.1| SNF2-family ATP dependent chromatin remodeling factor snf21 [Uncinocarpus reesii 1704] Length = 1435 Score = 87.3 bits (215), Expect = 1e-15, Method: Composition-based stats. Identities = 30/147 (20%), Positives = 58/147 (39%), Gaps = 18/147 (12%) Query: 65 KANAAPIIVAYH------FNSDLAR---LQKAFPQGRTL-DKDPCTIQEWNEG--KIPLL 112 KA+ +++ + D R L+ G T D ++ +N Sbjct: 891 KASGHRVLMFFQMTQIMNIMEDFLRFRGLKYLRLDGSTKSDDRSELLRLFNAPGSDYFCF 950 Query: 113 FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIA 172 + G GLNLQ + ++ + W+ + Q R + G K V + LI+ Sbjct: 951 LLSTRAGGLGLNLQT-ADTVIIYDSDWNPHQDLQA-----QDRAHRIGQKNEVRILRLIS 1004 Query: 173 QNTIDELVLQRLRTKSTIQDLLLNALK 199 N+++E +L+R + K + ++ A K Sbjct: 1005 SNSVEERILERAQFKLDMDGKVIQAGK 1031 >gi|116180352|ref|XP_001220025.1| hypothetical protein CHGG_00804 [Chaetomium globosum CBS 148.51] gi|88185101|gb|EAQ92569.1| hypothetical protein CHGG_00804 [Chaetomium globosum CBS 148.51] Length = 1644 Score = 87.3 bits (215), Expect = 1e-15, Method: Composition-based stats. Identities = 31/161 (19%), Positives = 58/161 (36%), Gaps = 20/161 (12%) Query: 51 VHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARL----------QKAFPQGRTLDKDP 98 K+ L+ ++ K + +++ L L + Sbjct: 777 TSSGKMMLLDQLLAKLKKDGHRVLIFSQMVKMLDILGDYLRVRGYQFQRLDGTIPAGPRR 836 Query: 99 CTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 I +N + G G+NL + ++ + W+ + Q + R Sbjct: 837 MAINHFNADDSDDFCFLLSTRAGGLGINLMT-ADTVIIYDSDWNPQADLQAMAR-----A 890 Query: 157 RQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + G KR V VY L+A+ TI+E V+ R R K ++ L + A Sbjct: 891 HRIGQKRPVNVYRLVAKQTIEEEVVNRARNKLFLEYLTIQA 931 >gi|323356072|gb|EGA87877.1| Rad16p [Saccharomyces cerevisiae VL3] Length = 593 Score = 87.3 bits (215), Expect = 1e-15, Method: Composition-based stats. Identities = 28/162 (17%), Positives = 56/162 (34%), Gaps = 23/162 (14%) Query: 43 DEEKHWKEVHDEKIKAL-EVIIE-KANAAPI--IVAYHFNSDLARLQKAFPQG------- 91 + W+ KI+AL E + + ++N I IV F S L ++ + Sbjct: 431 NMSGKWQ--SSTKIEALVEELYKLRSNKRTIKSIVFSQFTSMLDLVEWRLKRAGFQTVKL 488 Query: 92 ----RTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQM 147 +D N + + + G LNL + + WW+ Q Sbjct: 489 QGSMSPTQRDETIKYFMNNIQCEVFLVSLKAGGVALNLCEASQVFIL-DPWWNPSVEWQS 547 Query: 148 IERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKST 189 +R+ + G R V + +++I+ +++ K Sbjct: 548 GDRV-----HRIGQYRPVKITRFCIEDSIEARIIELQEKKXK 584 >gi|83771802|dbj|BAE61932.1| unnamed protein product [Aspergillus oryzae] Length = 826 Score = 87.3 bits (215), Expect = 1e-15, Method: Composition-based stats. Identities = 39/200 (19%), Positives = 74/200 (37%), Gaps = 25/200 (12%) Query: 5 HKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIE 64 +R+ C + I ++ + + + V D + KI+AL I+ Sbjct: 609 QVIERQHKCPMCRAEITDTSTLVEPAVEMGESTETVVADPD-----TPSSKIEALIKILT 663 Query: 65 K---ANAAPIIVAYHFNSDLARLQKAFP-----------QGRTLDKDPCTIQEWNEGKIP 110 A +V + S L L+ + +L +D T + ++ Sbjct: 664 AQGQAPGTKTVVFSQWTSFLNLLEPHLNRYGVGFARVDGKMSSLARDNSTYRFSHDPNCK 723 Query: 111 LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYL 170 +L A + C GLNL N + WW Q ++R+ + G R V+ L Sbjct: 724 VLLASLSVCSVGLNL-VAANQAILADSWWAPAIEDQAVDRV-----YRLGQTRETTVWRL 777 Query: 171 IAQNTIDELVLQRLRTKSTI 190 + +++I++ VL TK + Sbjct: 778 VMEDSIEDRVLAIQETKRKL 797 >gi|297694662|ref|XP_002824591.1| PREDICTED: chromodomain-helicase-DNA-binding protein 8-like isoform 2 [Pongo abelii] Length = 2302 Score = 87.3 bits (215), Expect = 1e-15, Method: Composition-based stats. Identities = 29/177 (16%), Positives = 62/177 (35%), Gaps = 20/177 (11%) Query: 36 ANGAVYYDEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRT 93 A + +D K+ ++ ++ K A +++ L L+ Q R Sbjct: 836 ACHIIPHDFHLQAMVRSAGKLVLIDKLLPKLKAGGHKVLIFSQMVRCLDILEDYLIQRRY 895 Query: 94 L----------DKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDL 141 L + I +++ + + G G+NL + + F W+ Sbjct: 896 LYERIDGRVRGNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLT-AADTCIIFDSDWNP 954 Query: 142 EEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNAL 198 + Q R + G +AV VY LI +N+ + + + K + +L ++ Sbjct: 955 QNDLQAQARC-----HRIGQSKAVKVYRLITRNSYEREMFDKASLKLGLDKAVLQSM 1006 >gi|290974011|ref|XP_002669740.1| predicted protein [Naegleria gruberi] gi|284083291|gb|EFC36996.1| predicted protein [Naegleria gruberi] Length = 1143 Score = 87.3 bits (215), Expect = 1e-15, Method: Composition-based stats. Identities = 24/152 (15%), Positives = 56/152 (36%), Gaps = 20/152 (13%) Query: 53 DEKIKALEVIIEKAN--AAPIIVAYHFNSDL---ARLQKAFPQGRTL--------DKDPC 99 K++ + ++++ ++ + + L R+ + +TL + Sbjct: 630 SSKLQIIVKLLKEHKKTGHRTLIFSQYKTMLDIVERIITEHLKLKTLRIDGGVAAKERQA 689 Query: 100 TIQEWNEGKI-PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQ 158 + + + + S G GL L + ++ W+ QQ ++R + Sbjct: 690 RVDLFQKNNMYSCFLLTTGSGGVGLTLT-AADRVILIDPHWNPAVDQQAVDR-----AYR 743 Query: 159 AGFKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 G + V Y LI T++E+V +R K + Sbjct: 744 VGQTKNVVTYRLITVGTLEEVVYRRQVIKDGL 775 >gi|156101125|ref|XP_001616256.1| SNF2 family N-terminal domain containing protein [Plasmodium vivax SaI-1] gi|148805130|gb|EDL46529.1| SNF2 family N-terminal domain containing protein [Plasmodium vivax] Length = 2946 Score = 87.3 bits (215), Expect = 1e-15, Method: Composition-based stats. Identities = 27/140 (19%), Positives = 53/140 (37%), Gaps = 18/140 (12%) Query: 69 APIIVAYHFNSDLARLQ-----KAFPQGRTLDKDPC-----TIQEWNEGK--IPLLFAHP 116 +++ F L L+ + + R I+E+N + Sbjct: 1218 HKVLIFTQFQLVLDELEEYCKYRCWKYMRLDGSTNKLIRELDIREFNLSDSIYFIYLIST 1277 Query: 117 ASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTI 176 + G G+NL N ++ + W+ Q I+R + G KR V V+ L+ + T+ Sbjct: 1278 RAGGLGINLT-AANHVIMYDEDWNPFIDLQAIDR-----AHRIGQKREVNVWKLMTEWTV 1331 Query: 177 DELVLQRLRTKSTIQDLLLN 196 +E + R K + L++ Sbjct: 1332 EERMAFRREQKLKLDKLVVQ 1351 >gi|114651883|ref|XP_001153458.1| PREDICTED: chromodomain helicase DNA binding protein 8 isoform 2 [Pan troglodytes] Length = 2302 Score = 87.3 bits (215), Expect = 1e-15, Method: Composition-based stats. Identities = 29/177 (16%), Positives = 62/177 (35%), Gaps = 20/177 (11%) Query: 36 ANGAVYYDEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRT 93 A + +D K+ ++ ++ K A +++ L L+ Q R Sbjct: 836 ACHIIPHDFHLQAMVRSAGKLVLIDKLLPKLKAGGHKVLIFSQMVRCLDILEDYLIQRRY 895 Query: 94 L----------DKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDL 141 L + I +++ + + G G+NL + + F W+ Sbjct: 896 LYERIDGRVRGNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLT-AADTCIIFDSDWNP 954 Query: 142 EEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNAL 198 + Q R + G +AV VY LI +N+ + + + K + +L ++ Sbjct: 955 QNDLQAQARC-----HRIGQSKAVKVYRLITRNSYEREMFDKASLKLGLDKAVLQSM 1006 >gi|114326455|ref|NP_065971.2| chromodomain-helicase-DNA-binding protein 8 isoform 2 [Homo sapiens] gi|225356486|gb|AAI56440.1| Chromodomain helicase DNA binding protein 8 [synthetic construct] Length = 2302 Score = 87.3 bits (215), Expect = 1e-15, Method: Composition-based stats. Identities = 29/177 (16%), Positives = 62/177 (35%), Gaps = 20/177 (11%) Query: 36 ANGAVYYDEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRT 93 A + +D K+ ++ ++ K A +++ L L+ Q R Sbjct: 836 ACHIIPHDFHLQAMVRSAGKLVLIDKLLPKLKAGGHKVLIFSQMVRCLDILEDYLIQRRY 895 Query: 94 L----------DKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDL 141 L + I +++ + + G G+NL + + F W+ Sbjct: 896 LYERIDGRVRGNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLT-AADTCIIFDSDWNP 954 Query: 142 EEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNAL 198 + Q R + G +AV VY LI +N+ + + + K + +L ++ Sbjct: 955 QNDLQAQARC-----HRIGQSKAVKVYRLITRNSYEREMFDKASLKLGLDKAVLQSM 1006 >gi|73946633|ref|XP_860170.1| PREDICTED: similar to SWI/SNF-related matrix-associated actin-dependent regulator of chromatin a2 isoform b isoform 15 [Canis familiaris] Length = 1550 Score = 87.3 bits (215), Expect = 1e-15, Method: Composition-based stats. Identities = 38/223 (17%), Positives = 75/223 (33%), Gaps = 34/223 (15%) Query: 3 QYHKFQRELYCDLQGENIEAFNSA-SKTVKCLQL---ANGAVY----------YDEEKHW 48 Y Q + G + A + +QL N + Sbjct: 963 LYRHMQAKGILLTDGSEKDKKGGAKTLMNTIMQLRKICNHPYMFQHIESQIFKTQRTRKD 1022 Query: 49 KEVHDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAF---------PQGRTLDKD 97 K + L+ I+ +A +++ S + ++ F G T +D Sbjct: 1023 LYRASGKFELLDRILPKLRATNHRVLLFCQMTSLMTIMEDYFAFRNFLYLRLDGTTKSED 1082 Query: 98 PCTI-QEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 + +++NE + + + G GLNLQ + +V F W+ + Q Sbjct: 1083 RAALLKKFNEPGSQYFIFLLSTRAGGLGLNLQ-AADTVVIFDSDWNPHQDLQA-----QD 1136 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 R + G + V V L N+++E +L + K + ++ A Sbjct: 1137 RAHRIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQA 1179 >gi|312372079|gb|EFR20122.1| hypothetical protein AND_20633 [Anopheles darlingi] Length = 2227 Score = 86.9 bits (214), Expect = 1e-15, Method: Composition-based stats. Identities = 22/137 (16%), Positives = 46/137 (33%), Gaps = 18/137 (13%) Query: 66 ANAAPIIVAYHFNSDLARLQ----------KAFPQGRTLDKDPCTIQEWNEGKIP--LLF 113 + +++ L L+ + G T I +N P Sbjct: 1150 SQGHRVLIFSQMTKMLDILEDFLEGLGYKYERIDGGITGSIRQEAIDRFNAPGAPQFCFL 1209 Query: 114 AHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQ 173 + G G+NL + ++ + W+ Q +R + G V +Y + + Sbjct: 1210 LSTRAGGLGINL-ATADTVIIYDSDWNPHNDIQA-----FSRAHRIGQANKVMIYRFVTR 1263 Query: 174 NTIDELVLQRLRTKSTI 190 N+++E V Q + K + Sbjct: 1264 NSVEERVTQVAKRKMML 1280 >gi|302416497|ref|XP_003006080.1| DNA repair protein RAD16 [Verticillium albo-atrum VaMs.102] gi|261355496|gb|EEY17924.1| DNA repair protein RAD16 [Verticillium albo-atrum VaMs.102] Length = 983 Score = 86.9 bits (214), Expect = 1e-15, Method: Composition-based stats. Identities = 24/133 (18%), Positives = 46/133 (34%), Gaps = 17/133 (12%) Query: 69 APIIVAYHFNSDLA----RLQKAFPQGRTLDKDPCTIQEW-------NEGKIPLLFAHPA 117 IV +F S L RL++A LD Q ++ Sbjct: 830 HKSIVFSNFTSMLQLIEWRLRRAGVTTVMLDGSMTPAQRQASIDHFMKNPEVECFLVSMK 889 Query: 118 SCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 + G LNL ++ + WW+ Q +R + G R + L +++++ Sbjct: 890 AGGVALNLTEASHVFI-VDPWWNPAAEWQSADRC-----HRIGQGRPCTITRLCIEDSVE 943 Query: 178 ELVLQRLRTKSTI 190 ++Q K+ + Sbjct: 944 SRIVQLQEKKTNM 956 >gi|238881028|gb|EEQ44666.1| chromatin remodelling complex ATPase chain ISW1 [Candida albicans WO-1] Length = 1056 Score = 86.9 bits (214), Expect = 1e-15, Method: Composition-based stats. Identities = 42/224 (18%), Positives = 82/224 (36%), Gaps = 39/224 (17%) Query: 6 KFQRELYCDLQGENIEAFNSAS--------KTVKCLQL---ANGAVYYD--------EEK 46 Q E Y L ++I+A N +QL N +D Sbjct: 386 DMQVEWYKRLLEKDIDAVNGVVGKREGKTRLLNIVMQLRKCCNHPYLFDGAEPGPPYTTD 445 Query: 47 HWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQ---------KAFPQGRTLD 95 + K+ L+ +++K A + +++ + L L+ G T Sbjct: 446 EHLVYNSGKMIILDKMLKKFKAEGSRVLIFSQMSRVLDILEDYCYFRDYEYCRIDGSTSH 505 Query: 96 KDP-CTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIG 152 +D I E+N + + G G+NL +I++ + W+ + Q ++R Sbjct: 506 EDRIEAIDEYNAPDSEKFIFLLTTRAGGLGINLT-SADIVILYDSDWNPQADLQAMDR-- 562 Query: 153 VTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + G K+ V V+ + + I+E VL+R K + L++ Sbjct: 563 ---AHRIGQKKQVKVFRFVTEKAIEEKVLERAAQKLRLDQLVIQ 603 >gi|313768125|ref|YP_004061556.1| hypothetical protein BpV1_126 [Bathycoccus sp. RCC1105 virus BpV1] gi|312599732|gb|ADQ91753.1| hypothetical protein BpV1_126 [Bathycoccus sp. RCC1105 virus BpV1] Length = 478 Score = 86.9 bits (214), Expect = 1e-15, Method: Composition-based stats. Identities = 31/168 (18%), Positives = 69/168 (41%), Gaps = 21/168 (12%) Query: 50 EVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQK-------AFPQGRTLDKDPCTIQ 102 E +K++ L +I + +V F ++ +++ + + ++ Sbjct: 296 EGRSKKMETLFKLISEHPDEKTLVFCQFKQEMDYIRENLTCPVFRIDGSVSKEDREKQLK 355 Query: 103 EWNE-GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGF 161 +NE + + + G GLN+Q + + F + W+ Q I R ++G Sbjct: 356 LFNEAPQNSVFLIQVKAGGQGLNIQC-ASRIYFTAPCWNPATELQAIGR-----AHRSGQ 409 Query: 162 KRAVFVYYLIAQNT-----IDELVLQRLRTKSTIQDLLL--NALKKET 202 KR V+V L+ +T +++ ++ KS + +L + LKK+ Sbjct: 410 KRKVYVKKLVYSDTPGYPSVEQAMIALQGHKSLLSAEVLRDDRLKKQI 457 >gi|195470933|ref|XP_002087761.1| GE14968 [Drosophila yakuba] gi|194173862|gb|EDW87473.1| GE14968 [Drosophila yakuba] Length = 1883 Score = 86.9 bits (214), Expect = 1e-15, Method: Composition-based stats. Identities = 29/173 (16%), Positives = 63/173 (36%), Gaps = 20/173 (11%) Query: 40 VYYDEEKHWKEVHDEKIKALEVIIEKAN--AAPIIVAYHFNSDLARL-----QKAFPQGR 92 + DE K+ L+ ++ + +++ L L ++ FP R Sbjct: 821 LQQDEALQTLLKGSGKLVLLDKLLCRLKETGHRVLIFSQMVRMLDVLADYLQKRHFPFQR 880 Query: 93 TLDK-----DPCTIQEWN-EGKIPL-LFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQ 145 + +N EG + G G+NL + ++ F W+ + Sbjct: 881 LDGSIKGEMRRQALDHFNAEGSQDFCFLLSTRAGGLGINL-ATADTVIIFDSDWNPQNDL 939 Query: 146 QMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNAL 198 Q R + G K V +Y L+ +++E +++R + K + L++ + Sbjct: 940 QAQAR-----AHRIGQKNQVNIYRLVTARSVEEQIVERAKQKMVLDHLVIQRM 987 >gi|118383249|ref|XP_001024779.1| SNF2 family N-terminal domain containing protein [Tetrahymena thermophila] gi|89306546|gb|EAS04534.1| SNF2 family N-terminal domain containing protein [Tetrahymena thermophila SB210] Length = 1046 Score = 86.9 bits (214), Expect = 1e-15, Method: Composition-based stats. Identities = 36/148 (24%), Positives = 58/148 (39%), Gaps = 19/148 (12%) Query: 61 VIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTL----------DKDPCTIQEWNEG--K 108 I +K+ IIV+Y L LQ Q K I + + Sbjct: 662 EIAQKSTERIIIVSYW-TQTLDVLQIMIKQKNLKFVRLDGSVNAQKRQELIDRFQDPTND 720 Query: 109 IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVY 168 I + ++ G GLNL N +V W+ Q++ RI + G + V +Y Sbjct: 721 IKVFLLCGSAGGTGLNL-SAANRMVLMEANWNPSNDLQVMGRIW-----RDGQTKPVHIY 774 Query: 169 YLIAQNTIDELVLQRLRTKSTIQDLLLN 196 L+A T++E VLQR K + +++ Sbjct: 775 RLVACGTMEEKVLQRQFLKEDLSQNVVD 802 >gi|68479793|ref|XP_716066.1| hypothetical protein CaO19.7401 [Candida albicans SC5314] gi|46437717|gb|EAK97058.1| hypothetical protein CaO19.7401 [Candida albicans SC5314] Length = 1056 Score = 86.9 bits (214), Expect = 1e-15, Method: Composition-based stats. Identities = 42/224 (18%), Positives = 82/224 (36%), Gaps = 39/224 (17%) Query: 6 KFQRELYCDLQGENIEAFNSAS--------KTVKCLQL---ANGAVYYD--------EEK 46 Q E Y L ++I+A N +QL N +D Sbjct: 386 DMQVEWYKRLLEKDIDAVNGVVGKREGKTRLLNIVMQLRKCCNHPYLFDGAEPGPPYTTD 445 Query: 47 HWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQ---------KAFPQGRTLD 95 + K+ L+ +++K A + +++ + L L+ G T Sbjct: 446 EHLVYNSGKMIILDKMLKKFKAEGSRVLIFSQMSRVLDILEDYCYFRDYEYCRIDGSTSH 505 Query: 96 KDP-CTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIG 152 +D I E+N + + G G+NL +I++ + W+ + Q ++R Sbjct: 506 EDRIEAIDEYNAPDSEKFIFLLTTRAGGLGINLT-SADIVILYDSDWNPQADLQAMDR-- 562 Query: 153 VTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + G K+ V V+ + + I+E VL+R K + L++ Sbjct: 563 ---AHRIGQKKQVKVFRFVTEKAIEEKVLERAAQKLRLDQLVIQ 603 >gi|190346466|gb|EDK38558.2| hypothetical protein PGUG_02656 [Meyerozyma guilliermondii ATCC 6260] Length = 1224 Score = 86.9 bits (214), Expect = 1e-15, Method: Composition-based stats. Identities = 39/225 (17%), Positives = 78/225 (34%), Gaps = 34/225 (15%) Query: 3 QYHKFQRELYCDLQGENIEAFNSAS-KTVKCLQL---ANGAVYYDE----------EKHW 48 Y + + + E A + K +QL N ++E + Sbjct: 721 LYQQMLKHNALFVGAEVGSAKSGIKGLNNKIMQLRKICNHPFVFEEVEDVLNPSRMTNNS 780 Query: 49 KEVHDEKIKALEVIIEK--ANAAPIIVAYHFNS------DLARLQK----AFPQGRTLDK 96 K + L+ ++ K A+ +++ + S D RL+ + Sbjct: 781 IWRSSGKFELLDRVLPKFKASGHRVLLFFQMTSVMDIMEDFLRLRNMKYLRLDGATKAED 840 Query: 97 DPCTIQEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 ++ +N + + G GLNLQ + ++ F W+ + Q Sbjct: 841 RQEMLKLFNAPGSEYFCFLLSTRAGGLGLNLQ-SADTVIIFDTDWNPHQDLQA-----QD 894 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 R + G K V + LI +++E++L+R K I ++ A K Sbjct: 895 RAHRIGQKNEVRILRLITNESVEEVILERAHQKLDIDGKVIQAGK 939 >gi|150866903|ref|XP_001386652.2| hypothetical protein PICST_33727 [Scheffersomyces stipitis CBS 6054] gi|149388159|gb|ABN68623.2| conserved hypothetical protein [Scheffersomyces stipitis CBS 6054] Length = 832 Score = 86.9 bits (214), Expect = 1e-15, Method: Composition-based stats. Identities = 29/160 (18%), Positives = 65/160 (40%), Gaps = 23/160 (14%) Query: 52 HDEKIKALEVI----IEKANAAPIIVAYHFNSDLARLQ-----KAFPQGRTLDKDPCTIQ 102 + KI+ L+ + IE + I++ F L L + R ++ Sbjct: 579 NSSKIQVLQQLCFPLIEANH--KILIFSQFTKLLDLLHDWFNYQNIKICRLDGSTSQAVR 636 Query: 103 E-----WNEGK-IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 + +N K + + G G+NL + ++ F W+ + Q I+R+ Sbjct: 637 DEQITQFNSDKDTKVFLLSTRAGGLGINLT-AADTVILFDNDWNPQMDLQAIDRV----- 690 Query: 157 RQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + G V V+ + +++I+EL++ +K ++ L++ Sbjct: 691 HRIGQTNPVKVFRFLIRDSIEELLISSSCSKRFLETLVIQ 730 >gi|70998504|ref|XP_753974.1| SNF2 family helicase [Aspergillus fumigatus Af293] gi|66851610|gb|EAL91936.1| SNF2 family helicase, putative [Aspergillus fumigatus Af293] Length = 975 Score = 86.9 bits (214), Expect = 1e-15, Method: Composition-based stats. Identities = 48/201 (23%), Positives = 79/201 (39%), Gaps = 26/201 (12%) Query: 5 HKFQRELYCDLQGENIEAFNSASK-TVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVII 63 +R+ C L NI+ ++ V + A+ V D KI+AL I+ Sbjct: 759 QVIERQHKCPLCRANIDDNSTLVAPAVDLGESADEDVDADPNN-----PSSKIEALIKIL 813 Query: 64 EKANAAP---IIVAYHFNSDLA----RLQKAFPQGRTLD-------KDPCTIQEWNEGKI 109 AP +V + S L LQ+ +D +D T + + + Sbjct: 814 TAQGQAPDTKTVVFSQWTSFLTLVEPHLQRHGIGYARIDGSMKSTARDASTYKFSKDPQC 873 Query: 110 PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYY 169 +L A + C GLNL N + WW Q ++R+ + G KR V+ Sbjct: 874 KVLLASLSVCSVGLNL-VAANQAILADSWWAPAIEDQAVDRV-----YRLGQKRETTVWR 927 Query: 170 LIAQNTIDELVLQRLRTKSTI 190 L+ +NTI++ VL+ TK + Sbjct: 928 LVMENTIEDRVLEIQDTKRKL 948 >gi|327285131|ref|XP_003227288.1| PREDICTED: chromodomain-helicase-DNA-binding protein 8-like [Anolis carolinensis] Length = 2471 Score = 86.9 bits (214), Expect = 1e-15, Method: Composition-based stats. Identities = 26/146 (17%), Positives = 52/146 (35%), Gaps = 18/146 (12%) Query: 65 KANAAPIIVAYHFNSDLARLQKAFPQGRTL----------DKDPCTIQEWNEGKIP--LL 112 KA +++ L L+ Q R L + I +++ + Sbjct: 1126 KAGGHKVLIFSQMVRCLDILEDYLIQKRYLYERIDGRVRGNLRQAAIDRFSKPDSDRFVF 1185 Query: 113 FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIA 172 + G G+NL + + F W+ + Q R + G +AV VY LI Sbjct: 1186 LLCTRAGGLGINLT-AADTCIIFDSDWNPQNDLQAQARC-----HRIGQSKAVKVYRLIT 1239 Query: 173 QNTIDELVLQRLRTKSTIQDLLLNAL 198 +N+ + + + K + +L ++ Sbjct: 1240 RNSYEREMFDKASLKLGLDKAVLQSM 1265 >gi|256072060|ref|XP_002572355.1| helicase [Schistosoma mansoni] gi|238657512|emb|CAZ28586.1| helicase, putative [Schistosoma mansoni] Length = 1016 Score = 86.9 bits (214), Expect = 1e-15, Method: Composition-based stats. Identities = 40/230 (17%), Positives = 83/230 (36%), Gaps = 41/230 (17%) Query: 2 KQY---HKFQRELYCDLQGENIEAFNS-------ASKTVKCLQL---ANGAVYYD--EEK 46 K Y K QR+LY + ++I+ NS +QL N +D E Sbjct: 340 KIYIGLSKMQRDLYTKILMKDIDVVNSVGNKVDRLRLLNILMQLRKCCNHPYLFDGLEPG 399 Query: 47 HWKEVHDEKIKAL--------EVIIEKANAAPIIVAYHFNSDLARLQ---------KAFP 89 + + K + +++ + L+ Sbjct: 400 PPFTTDHHLVDNCGKLMLLDKLLPKLKQQGSRVLLFCQMTRMMDILEDYCLWRGHEYFRL 459 Query: 90 QGRTLDKDPC-TIQEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 G T ++ +I E+N L + G G+NL ++++ + W+ + Q Sbjct: 460 DGSTPHEERQISIDEYNRPGSTKFLFMLSTRAGGLGINL-ATADVVIIYDSDWNPQVDLQ 518 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 ++R + G + V V+ LI ++T++E ++ R K + +L++ Sbjct: 519 AMDR-----AHRIGQTKTVRVFRLITEHTVEERIIMRAEMKLKLDNLVIQ 563 >gi|194207057|ref|XP_001918380.1| PREDICTED: chromodomain helicase DNA binding protein 8 [Equus caballus] Length = 2303 Score = 86.9 bits (214), Expect = 1e-15, Method: Composition-based stats. Identities = 29/177 (16%), Positives = 62/177 (35%), Gaps = 20/177 (11%) Query: 36 ANGAVYYDEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRT 93 A + +D K+ ++ ++ K A +++ L L+ Q R Sbjct: 836 ACHIIPHDFHLQAMVRSAGKLVLIDKLLPKLKAGGHKVLIFSQMVRCLDILEDYLIQRRY 895 Query: 94 L----------DKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDL 141 L + I +++ + + G G+NL + + F W+ Sbjct: 896 LYERIDGRVRGNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLT-AADTCIIFDSDWNP 954 Query: 142 EEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNAL 198 + Q R + G +AV VY LI +N+ + + + K + +L ++ Sbjct: 955 QNDLQAQARC-----HRIGQSKAVKVYRLITRNSYEREMFDKASLKLGLDKAVLQSM 1006 >gi|51476360|emb|CAH18170.1| hypothetical protein [Homo sapiens] Length = 2302 Score = 86.9 bits (214), Expect = 1e-15, Method: Composition-based stats. Identities = 29/177 (16%), Positives = 62/177 (35%), Gaps = 20/177 (11%) Query: 36 ANGAVYYDEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRT 93 A + +D K+ ++ ++ K A +++ L L+ Q R Sbjct: 836 ACHIIPHDFHLQAMVRSAGKLVLIDKLLPKLKAGGHKVLIFSQMVRCLDILEDYLIQRRY 895 Query: 94 L----------DKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDL 141 L + I +++ + + G G+NL + + F W+ Sbjct: 896 LYERIDGRVRGNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLT-AADTCIIFDSDWNP 954 Query: 142 EEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNAL 198 + Q R + G +AV VY LI +N+ + + + K + +L ++ Sbjct: 955 QNDLQAQARC-----HRIGQSKAVKVYRLITRNSYEREMFDKASLKLGLDKAVLQSM 1006 >gi|302773596|ref|XP_002970215.1| hypothetical protein SELMODRAFT_441095 [Selaginella moellendorffii] gi|300161731|gb|EFJ28345.1| hypothetical protein SELMODRAFT_441095 [Selaginella moellendorffii] Length = 1901 Score = 86.9 bits (214), Expect = 1e-15, Method: Composition-based stats. Identities = 32/180 (17%), Positives = 60/180 (33%), Gaps = 32/180 (17%) Query: 44 EEKHWKEVHDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAFP------------ 89 E K + K+ + ++ + +V L ++ Sbjct: 1341 ESKRDVLENSGKMVLIMTLLSLNSSRGEKTLVFSQSLHTLDLIENFLDTIPLGGSQDVWN 1400 Query: 90 QGR---------TLDKDPCTIQEWNEGK---IPLLFAHPASCGHGLNLQYGGNILVFFSL 137 +G+ T + +N+ I L + G N+ G N ++ Sbjct: 1401 KGKEWLRLDGNTTASRRQQIADIFNDPNNTAIKCLLISTKAGSLGTNMT-GANRVIIVDG 1459 Query: 138 WWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 W+ Q + R + G + VFVY L+A T++E + R TK I +L+A Sbjct: 1460 SWNPTHDLQA-----LFRAWRYGQTKPVFVYRLLAYGTMEEKIYNRQLTKEGIAARVLDA 1514 >gi|73946655|ref|XP_860536.1| PREDICTED: similar to SWI/SNF-related matrix-associated actin-dependent regulator of chromatin a2 isoform b isoform 25 [Canis familiaris] Length = 1548 Score = 86.9 bits (214), Expect = 1e-15, Method: Composition-based stats. Identities = 37/223 (16%), Positives = 77/223 (34%), Gaps = 34/223 (15%) Query: 3 QYHKFQRELYCDLQGENIEA-FNSASKTVKCLQLANGAVYYDEEKHWKEVH--------- 52 Y Q + G + + + +QL + +H + Sbjct: 961 LYRHMQAKGILLTDGSEKDKKVRAKTLMNTIMQLRKICNHPYMFQHIEVKPTVGDECMAE 1020 Query: 53 ----DEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAF---------PQGRTLDKD 97 K + L+ I+ +A +++ S + ++ F G T +D Sbjct: 1021 LYRASGKFELLDRILPKLRATNHRVLLFCQMTSLMTIMEDYFAFRNFLYLRLDGTTKSED 1080 Query: 98 PCTI-QEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 + +++NE + + + G GLNLQ + +V F W+ + Q Sbjct: 1081 RAALLKKFNEPGSQYFIFLLSTRAGGLGLNLQ-AADTVVIFDSDWNPHQDLQA-----QD 1134 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 R + G + V V L N+++E +L + K + ++ A Sbjct: 1135 RAHRIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQA 1177 >gi|320589247|gb|EFX01709.1| chromodomain helicase [Grosmannia clavigera kw1407] Length = 1719 Score = 86.9 bits (214), Expect = 1e-15, Method: Composition-based stats. Identities = 33/174 (18%), Positives = 65/174 (37%), Gaps = 20/174 (11%) Query: 38 GAVYYDEEKHWKEVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQ---------- 85 G+V +++ K+ L+ ++ K + +++ L L Sbjct: 768 GSVRREDQIKGLITSSGKMMLLDQLLAKLKKDNHRVLIFSQMVKMLDLLADYLRVRGYQF 827 Query: 86 KAFPQGRTLDKDPCTIQEWN--EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEE 143 + I +N + G G+NL + ++ + W+ + Sbjct: 828 QRLDGTIPAGPRRMAINHFNAENSDDFCFLLSTRAGGLGINLMT-ADTVIIYDSDWNPQA 886 Query: 144 HQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 Q + R + G KR V VY L+A+ TI+E V++R R K ++ L + A Sbjct: 887 DLQAMAR-----AHRIGQKRPVNVYRLVAKQTIEEEVVKRARNKLFLEYLTIQA 935 >gi|73977356|ref|XP_532624.2| PREDICTED: similar to chromodomain helicase DNA binding protein 8 isoform 1 [Canis familiaris] Length = 2304 Score = 86.9 bits (214), Expect = 1e-15, Method: Composition-based stats. Identities = 29/177 (16%), Positives = 62/177 (35%), Gaps = 20/177 (11%) Query: 36 ANGAVYYDEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRT 93 A + +D K+ ++ ++ K A +++ L L+ Q R Sbjct: 836 ACHIIPHDFHLQAMVRSAGKLVLIDKLLPKLKAGGHKVLIFSQMVRCLDILEDYLIQRRY 895 Query: 94 L----------DKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDL 141 L + I +++ + + G G+NL + + F W+ Sbjct: 896 LYERIDGRVRGNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLT-AADTCIIFDSDWNP 954 Query: 142 EEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNAL 198 + Q R + G +AV VY LI +N+ + + + K + +L ++ Sbjct: 955 QNDLQAQARC-----HRIGQSKAVKVYRLITRNSYEREMFDKASLKLGLDKAVLQSM 1006 >gi|329954230|ref|ZP_08295324.1| helicase protein [Bacteroides clarus YIT 12056] gi|328527936|gb|EGF54922.1| helicase protein [Bacteroides clarus YIT 12056] Length = 562 Score = 86.9 bits (214), Expect = 1e-15, Method: Composition-based stats. Identities = 37/149 (24%), Positives = 60/149 (40%), Gaps = 15/149 (10%) Query: 55 KIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEW-------N 105 KIKA I +IV + + L+K FPQ T+ + I++ N Sbjct: 397 KIKAAAEFIHDVIDGGEKLIVFAYLKEVVMELKKMFPQAVTVTGEDNAIRKQMSVDAFQN 456 Query: 106 EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 L+ + S G GL L + + F W + +Q +R + G K V Sbjct: 457 NPDCTLIILNYKSGGTGLTLT-ASSRVAFIEFPWTFSDCEQAEDR-----AHRNGQKNNV 510 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 YY + +NTIDE + ++ K I + + Sbjct: 511 NCYYFLGKNTIDEYMYDVIQRKKGIANGV 539 >gi|297297436|ref|XP_001096619.2| PREDICTED: chromodomain-helicase-DNA-binding protein 8-like [Macaca mulatta] Length = 2301 Score = 86.9 bits (214), Expect = 1e-15, Method: Composition-based stats. Identities = 29/177 (16%), Positives = 62/177 (35%), Gaps = 20/177 (11%) Query: 36 ANGAVYYDEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRT 93 A + +D K+ ++ ++ K A +++ L L+ Q R Sbjct: 836 ACHIIPHDFHLQAMVRSAGKLVLIDKLLPKLKAGGHKVLIFSQMVRCLDILEDYLIQRRY 895 Query: 94 L----------DKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDL 141 L + I +++ + + G G+NL + + F W+ Sbjct: 896 LYERIDGRVRGNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLT-AADTCIIFDSDWNP 954 Query: 142 EEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNAL 198 + Q R + G +AV VY LI +N+ + + + K + +L ++ Sbjct: 955 QNDLQAQARC-----HRIGQSKAVKVYRLITRNSYEREMFDKASLKLGLDKAVLQSM 1006 >gi|289622059|emb|CBI51237.1| unnamed protein product [Sordaria macrospora] Length = 1194 Score = 86.9 bits (214), Expect = 1e-15, Method: Composition-based stats. Identities = 24/152 (15%), Positives = 55/152 (36%), Gaps = 18/152 (11%) Query: 65 KANAAPIIVAYHFNSDLARLQ-----------KAFPQGRTLDKDPCTIQEW-NEGKIPLL 112 + I+ + S L ++ + + IQE+ + +L Sbjct: 1028 QQTDEKTIIFSQWTSHLDLIECSLKFKLNIKYHRYTGNMPRSQRDNAIQEFVENPDVKVL 1087 Query: 113 FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIA 172 + GLNL ++V +W+ Q ++R + G K V +Y ++ Sbjct: 1088 LVSLKAGNAGLNLTVASRVIV-CDPFWNPFIEDQAVDR-----AHRIGQKSEVHIYKILV 1141 Query: 173 QNTIDELVLQRLRTKSTIQDLLLNALKKETIH 204 + TI++ + + K I + L+ + + + Sbjct: 1142 EETIEDRITELQNVKRDIVETALDETQSKQLG 1173 >gi|159126292|gb|EDP51408.1| SNF2 family helicase, putative [Aspergillus fumigatus A1163] Length = 975 Score = 86.9 bits (214), Expect = 1e-15, Method: Composition-based stats. Identities = 48/201 (23%), Positives = 79/201 (39%), Gaps = 26/201 (12%) Query: 5 HKFQRELYCDLQGENIEAFNSASK-TVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVII 63 +R+ C L NI+ ++ V + A+ V D KI+AL I+ Sbjct: 759 QVIERQHKCPLCRANIDDNSTLVAPAVDLGESADEDVDADPNN-----PSSKIEALIKIL 813 Query: 64 EKANAAP---IIVAYHFNSDLA----RLQKAFPQGRTLD-------KDPCTIQEWNEGKI 109 AP +V + S L LQ+ +D +D T + + + Sbjct: 814 TAQGQAPDTKTVVFSQWTSFLTLVEPHLQRHGIGYARIDGSMKSTARDASTYKFSKDPQC 873 Query: 110 PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYY 169 +L A + C GLNL N + WW Q ++R+ + G KR V+ Sbjct: 874 KVLLASLSVCSVGLNL-VAANQAILADSWWAPAIEDQAVDRV-----YRLGQKRETTVWR 927 Query: 170 LIAQNTIDELVLQRLRTKSTI 190 L+ +NTI++ VL+ TK + Sbjct: 928 LVMENTIEDRVLEIQDTKRKL 948 >gi|296214427|ref|XP_002753817.1| PREDICTED: chromodomain-helicase-DNA-binding protein 8 isoform 2 [Callithrix jacchus] Length = 2304 Score = 86.9 bits (214), Expect = 1e-15, Method: Composition-based stats. Identities = 29/177 (16%), Positives = 62/177 (35%), Gaps = 20/177 (11%) Query: 36 ANGAVYYDEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRT 93 A + +D K+ ++ ++ K A +++ L L+ Q R Sbjct: 836 ACHIIPHDFHLQAMVRSAGKLVLIDKLLPKLKAGGHKVLIFSQMVRCLDILEDYLIQRRY 895 Query: 94 L----------DKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDL 141 L + I +++ + + G G+NL + + F W+ Sbjct: 896 LYERIDGRVRGNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLT-AADTCIIFDSDWNP 954 Query: 142 EEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNAL 198 + Q R + G +AV VY LI +N+ + + + K + +L ++ Sbjct: 955 QNDLQAQARC-----HRIGQSKAVKVYRLITRNSYEREMFDKASLKLGLDKAVLQSM 1006 >gi|63054489|ref|NP_593038.2| ATP-dependent DNA helicase Rdh54 [Schizosaccharomyces pombe 972h-] gi|38258935|sp|Q09772|RDH54_SCHPO RecName: Full=Meiotic recombination protein rdh54; AltName: Full=ATP-dependent helicase rdh54; AltName: Full=Meiotically up-regulated gene 34 protein; AltName: Full=RAD54 protein homolog 2 gi|30519798|emb|CAA91068.3| ATP-dependent DNA helicase Rdh54 [Schizosaccharomyces pombe] gi|31323296|gb|AAP44116.1| meiotic recombination factor Rdh54 [Schizosaccharomyces pombe] Length = 811 Score = 86.9 bits (214), Expect = 1e-15, Method: Composition-based stats. Identities = 26/162 (16%), Positives = 59/162 (36%), Gaps = 21/162 (12%) Query: 51 VHDEKIKALEVIIEKANA--APIIVAYHFNSDLARLQK----------AFPQGRTLDKDP 98 + K++ L +++ ++ + L ++ + Sbjct: 529 LSSSKLQILAALLKSFQRGCQKAVIVSQYKETLELIELFLSILHVRFCKLLGSTPFSERD 588 Query: 99 CTIQEWNE---GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTR 155 + +N + +L + G GLNL G L+ + W+ + Q + RI Sbjct: 589 LIVHNFNTSSFKEFSVLLLSSKAGGCGLNLT-GSTRLIIYEPSWNPAQDLQALSRI---- 643 Query: 156 QRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 ++G KR V +Y ++ +DE + R TK + +++ Sbjct: 644 -YRSGQKRPVCIYTFLSSGMLDERIFIRQNTKQGLSSSFIDS 684 >gi|325186402|emb|CCA20908.1| transcriptional regulator ATRX putative [Albugo laibachii Nc14] Length = 1323 Score = 86.9 bits (214), Expect = 1e-15, Method: Composition-based stats. Identities = 35/181 (19%), Positives = 66/181 (36%), Gaps = 34/181 (18%) Query: 44 EEKHWKEVHDEKIKALEVIIEKAN--AAPIIVAYH-----------------------FN 78 + +H + K+ L ++E +IV Sbjct: 690 DYEHGELDFSGKMVVLFEMLEACQEIGDRVIVFSQSIATLNVIEMFIAQRNNRLRRSRKK 749 Query: 79 SDLARLQKAFPQGRTLDKDP-CTIQEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFF 135 D A G T +D I+++N+ + ++F + G G+NL GGN +V F Sbjct: 750 HDKAPFTSLRIDGSTSQQDRFRQIEQFNDPEEDVDVIFISTKAGGEGINL-CGGNRIVIF 808 Query: 136 SLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 + W+ Q + R + G + VFVY +A T+++ V K + ++ Sbjct: 809 DVCWNPCNDAQSM-----CRSYRFGQTKPVFVYRFVAGATMEKKVYDLQIRKEGVAKQIV 863 Query: 196 N 196 + Sbjct: 864 D 864 >gi|5911978|emb|CAB55959.1| hypothetical protein [Homo sapiens] Length = 1388 Score = 86.9 bits (214), Expect = 1e-15, Method: Composition-based stats. Identities = 22/160 (13%), Positives = 54/160 (33%), Gaps = 20/160 (12%) Query: 45 EKHWKEVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQ----------KAFPQGR 92 + K+ L+ +++K +++ L L+ + G Sbjct: 449 DGSSLVKSSGKLMLLQKMLKKLRDEGHRVLIFSQMTKMLDLLEDFLEYEGYKYERIDGGI 508 Query: 93 TLDKDPCTIQEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 T I +N + + G G+NL + ++ + W+ Q Sbjct: 509 TGGLRQEAIDRFNAPGAQQFCFLLSTRAGGLGINL-ATADTVIIYDSDWNPHNDIQA--- 564 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 +R + G + V +Y + + +++E + Q + K + Sbjct: 565 --FSRAHRIGQNKKVMIYRFVTRASVEERITQVAKRKMML 602 >gi|291000680|ref|XP_002682907.1| predicted protein [Naegleria gruberi] gi|284096535|gb|EFC50163.1| predicted protein [Naegleria gruberi] Length = 651 Score = 86.9 bits (214), Expect = 1e-15, Method: Composition-based stats. Identities = 27/157 (17%), Positives = 62/157 (39%), Gaps = 20/157 (12%) Query: 52 HDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQ----------KAFPQGRTLDKDPC 99 K+ L+ ++EK +++ + + L L+ + F T + Sbjct: 173 SSSKLIVLDYLLEKHYGEGNKVVIFSQYTTTLDFLEYYLMLKEYKYQRFDGSNTKSERTE 232 Query: 100 TIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 ++ + + + G GLNL N+++ + + W+ +Q R Sbjct: 233 AVESFQHENSQDFVFLLSTKAGGVGLNL-ISANVVIEYDITWNPHADEQATNRC-----H 286 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 + G + V+VY + Q +I++LVL+ + K + + Sbjct: 287 RIGQTKTVYVYKFLIQKSIEDLVLKYTQEKLAMSTRV 323 >gi|169595490|ref|XP_001791169.1| hypothetical protein SNOG_00484 [Phaeosphaeria nodorum SN15] gi|160701103|gb|EAT91979.2| hypothetical protein SNOG_00484 [Phaeosphaeria nodorum SN15] Length = 1093 Score = 86.9 bits (214), Expect = 1e-15, Method: Composition-based stats. Identities = 37/188 (19%), Positives = 69/188 (36%), Gaps = 28/188 (14%) Query: 27 SKTVKCLQLANGAVYYDEEKHWKEVHDE-------KIKALEVIIE--KANAAPIIVAYHF 77 SK ++ L+LA Y + K+ + + K K L +++ +N +++ H Sbjct: 633 SKDLELLELACPRQYRELYKNRDSILKQSQREFCGKWKVLRRLLDFWHSNGDKVLIFSHS 692 Query: 78 NSDLARLQKAFPQGRTL------------DKDPCTIQEWN-EGKIPLLFAHPASCGHGLN 124 L L+ F T + + ++N + + + G GLN Sbjct: 693 VRLLRLLRGLFDIDGTKYNFSYLDGSMKYEDRSKVVADFNADPDQFVFLISTKAGGVGLN 752 Query: 125 LQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRL 184 + N +V W+ Q R + G R V V+ L++ TI+E+V R Sbjct: 753 IT-SANKVVIVDPHWNPAYDLQA-----QDRAYRIGQTRDVEVFRLVSSGTIEEIVYARQ 806 Query: 185 RTKSTIQD 192 K + Sbjct: 807 IYKQQQAN 814 >gi|293342563|ref|XP_002725263.1| PREDICTED: similar to putative repair and recombination helicase RAD26L isoform 2 [Rattus norvegicus] gi|293354404|ref|XP_002728495.1| PREDICTED: RAD26L hypothetical protein isoform 1 [Rattus norvegicus] gi|149029138|gb|EDL84423.1| similar to putative repair and recombination helicase RAD26L (predicted), isoform CRA_b [Rattus norvegicus] Length = 1542 Score = 86.9 bits (214), Expect = 1e-15, Method: Composition-based stats. Identities = 31/152 (20%), Positives = 62/152 (40%), Gaps = 19/152 (12%) Query: 53 DEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQK---------AFPQGRTLDKDP-CT 100 K+K L+ ++ + + +++ L LQ+ G T ++ Sbjct: 514 SGKMKVLDQLLNHFRKHRDKVLLFSFSTKLLDVLQQYCMASGLDYRRLDGSTKSEERLKI 573 Query: 101 IQEWNEG-KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQA 159 ++E+N + + + G GLN G N+++ F W+ Q I+R + Sbjct: 574 VKEFNSSQDVNICLVSTMAGGLGLNF-IGANVVILFDPTWNPANDLQAIDR-----AYRI 627 Query: 160 GFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQ 191 G R V V+ LI+ T++E++ R K + Sbjct: 628 GQCRDVKVFRLISLGTVEEIMYLRQVYKQQLH 659 >gi|71022005|ref|XP_761233.1| hypothetical protein UM05086.1 [Ustilago maydis 521] gi|46097644|gb|EAK82877.1| hypothetical protein UM05086.1 [Ustilago maydis 521] Length = 1834 Score = 86.9 bits (214), Expect = 1e-15, Method: Composition-based stats. Identities = 32/221 (14%), Positives = 81/221 (36%), Gaps = 30/221 (13%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWK----------EV 51 + Y Y L G F+ + ++ + +N +D + + Sbjct: 825 RMYKAILTRNYSLLSGATTAQFSLLNIAIELKKASNHPYLFDGTEIISDNREETLKGLVM 884 Query: 52 HDEKIKALEVIIEK--ANAAPIIVAYH----------FNSDLARLQKAFPQGRTLDKDPC 99 H K+ L+ ++ + A+ +++ + S + + + + Sbjct: 885 HSGKMVLLDKLLARLKADGHRVLIFSQMVRMLDILSDYMSLRGYIHQRLDGTVSSEIRKK 944 Query: 100 TIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 I+ +N P + G G+NL + ++ F W+ + Q + R Sbjct: 945 AIEHFNAEGSPDFAFLLSTRAGGLGINL-ETADTVIIFDSDWNPQNDLQAMAR-----AH 998 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNAL 198 + K V V+ + ++T++E VL+R + K ++ +++ + Sbjct: 999 RLNSKFHVSVFRFLTKDTVEEDVLERAKRKMVLEYAIIHQM 1039 >gi|332026198|gb|EGI66340.1| Chromodomain-helicase-DNA-binding protein 1 [Acromyrmex echinatior] Length = 1821 Score = 86.9 bits (214), Expect = 1e-15, Method: Composition-based stats. Identities = 37/224 (16%), Positives = 76/224 (33%), Gaps = 42/224 (18%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEV 61 K Y ++ ++G N + KC N A +E +E L+ Sbjct: 701 KNYEALRKG----VKGSTTTFLNIVIELKKC---CNHAFLTKPMDAEREKTNE--DYLQQ 751 Query: 62 IIEKAN---------------AAPIIVAYHFNSDLARL-----QKAFPQGRTLDK----- 96 +I + +++ L L ++ FP R Sbjct: 752 LIRGSGKLVLLDKLLVRLRDTGHRVLIFSQMVRMLDILGEYLQRRHFPFQRLDGSIKGEL 811 Query: 97 DPCTIQEWN-EGKIPL-LFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 + +N EG + G G+NL + ++ F W+ + Q R Sbjct: 812 RKQALDHFNAEGSQDFCFLLSTRAGGLGINL-ATADTVIIFDSDWNPQNDLQAQAR---- 866 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNAL 198 + G K V +Y L+ + +++E +++R + K + L++ + Sbjct: 867 -AHRIGQKNKVNIYRLVTKKSVEEEIVERAKQKMVLDHLVIQRM 909 >gi|300122317|emb|CBK22889.2| unnamed protein product [Blastocystis hominis] Length = 698 Score = 86.9 bits (214), Expect = 1e-15, Method: Composition-based stats. Identities = 22/141 (15%), Positives = 52/141 (36%), Gaps = 18/141 (12%) Query: 68 AAPIIVAYHFNSDLARLQK----------AFPQGRTLDKDPCTIQEWNEGKIP--LLFAH 115 + +++ L L+ I +N + Sbjct: 323 GSRVLLFSQMRRVLDILEDYCNIRGFEYCRIDGSTESVDREEEINSFNAENSTKFVFLLS 382 Query: 116 PASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNT 175 + G G+NL + ++ + W+ + Q +R + G K+ V VY L+ + T Sbjct: 383 TRAGGLGINL-ATADTVILYDSDWNPQMDLQAEDR-----AHRIGQKKTVNVYRLVTEGT 436 Query: 176 IDELVLQRLRTKSTIQDLLLN 196 ++E++++R + K + L++ Sbjct: 437 VEEMIVERAKLKLRLDTLVIQ 457 >gi|323454465|gb|EGB10335.1| hypothetical protein AURANDRAFT_52962 [Aureococcus anophagefferens] Length = 258 Score = 86.9 bits (214), Expect = 2e-15, Method: Composition-based stats. Identities = 26/89 (29%), Positives = 44/89 (49%), Gaps = 7/89 (7%) Query: 109 IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVY 168 +L + G G+NL G N +V F + W+ +Q + R + G KR VFVY Sbjct: 82 CDVLLMSIKAGGEGINLT-GANRVVLFDVCWNPCFDRQAM-----CRAHRFGQKRPVFVY 135 Query: 169 YLIA-QNTIDELVLQRLRTKSTIQDLLLN 196 L+A + T++ VL++ R K + ++ Sbjct: 136 RLVAPRGTMEAKVLRQQRRKELLVREVVE 164 >gi|224371596|ref|YP_002605760.1| Helicase, Snf2 family [Desulfobacterium autotrophicum HRM2] gi|223694313|gb|ACN17596.1| Helicase, Snf2 family [Desulfobacterium autotrophicum HRM2] Length = 888 Score = 86.9 bits (214), Expect = 2e-15, Method: Composition-based stats. Identities = 38/185 (20%), Positives = 72/185 (38%), Gaps = 26/185 (14%) Query: 27 SKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKA---NAAPIIVAYHFNSDLAR 83 ++ + N D E H K+K L+ II++ N +++ + + Sbjct: 570 VLLLRMRMVCNSTYLIDRETHI----SPKLKELDNIIDELVVQNRRKMVIFSEWTTMTFL 625 Query: 84 LQKAFPQGRT----------LDKDPCTIQEW-NEGKIPLLFAHPASCGHGLNLQYGGNIL 132 + K + K I E+ N + + + G GLNLQ + + Sbjct: 626 IAKHLSDMGIEFVELSGKVAVKKRQNLIDEFTNNPQCRVFL-STDAGGTGLNLQ-AADCV 683 Query: 133 VFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVF-VYYLIAQNTIDELVLQRLRTKSTIQ 191 V F L W+ + Q I R+ + G V LIA+N+I+E +L ++ K+ + Sbjct: 684 VNFELPWNPAKMNQRIGRVS-----RIGQASQCINVINLIAKNSIEERILAGIQLKTDLF 738 Query: 192 DLLLN 196 + + Sbjct: 739 KGVFD 743 >gi|255933007|ref|XP_002557974.1| Pc12g11570 [Penicillium chrysogenum Wisconsin 54-1255] gi|211582593|emb|CAP80784.1| Pc12g11570 [Penicillium chrysogenum Wisconsin 54-1255] Length = 1229 Score = 86.9 bits (214), Expect = 2e-15, Method: Composition-based stats. Identities = 32/155 (20%), Positives = 59/155 (38%), Gaps = 18/155 (11%) Query: 63 IEKANAAPIIVAYHFNSDLARLQ-----------KAFPQGRTLDKDPCTIQEWNEGK-IP 110 +E + +V + S L ++ TL ++E+ + I Sbjct: 1068 LEGQSPIKSVVFSAWTSHLDLIEIALQNNGLDGFTRLDGTMTLAARTRALEEFAKNDNIK 1127 Query: 111 LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYL 170 +L A + G GLNL + + ++ Q I+RI + G R V + Sbjct: 1128 VLLATIGAGGVGLNLTSASRVFIM-EPQYNPAAVAQAIDRI-----HRLGQTRPVQTFQF 1181 Query: 171 IAQNTIDELVLQRLRTKSTIQDLLLNALKKETIHV 205 I + +I+E +L R K + D LN +K++ Sbjct: 1182 IMKGSIEEKILDLARKKQEMADTSLNRVKQDKRET 1216 >gi|125805885|ref|XP_693071.2| PREDICTED: helicase-like transcription factor-like [Danio rerio] gi|169158941|emb|CAQ15009.1| helicase-like transcription factor [Danio rerio] Length = 942 Score = 86.9 bits (214), Expect = 2e-15, Method: Composition-based stats. Identities = 31/168 (18%), Positives = 64/168 (38%), Gaps = 25/168 (14%) Query: 42 YDEEKHWKEVHDEKIKALE-VIIEKANAAPI---IVAYHFNSDLARLQKAF--------- 88 D ++W+ K AL +++ N P +V F L L+ A Sbjct: 758 SDTGENWR--SSSKALALMSNLLKLRNEDPTVKSMVVSQFTGFLDVLEVALREYGFSFTR 815 Query: 89 PQGRTLDK-DPCTIQEWNE---GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEH 144 G + + I+++ + G ++ + G GLNL + V W+ Sbjct: 816 LDGSLIQRARAKAIEDFQDSTPGSPTIMLLSLKAGGVGLNLTAASQVFVM-DPAWNPAAE 874 Query: 145 QQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQD 192 Q ++R + G R V + I +++++E +++ + K + D Sbjct: 875 DQCVDRC-----HRLGQSRDVVITKFIVKDSVEENMVKIQKKKQELVD 917 >gi|156401565|ref|XP_001639361.1| predicted protein [Nematostella vectensis] gi|156226489|gb|EDO47298.1| predicted protein [Nematostella vectensis] Length = 1360 Score = 86.9 bits (214), Expect = 2e-15, Method: Composition-based stats. Identities = 29/171 (16%), Positives = 58/171 (33%), Gaps = 20/171 (11%) Query: 42 YDEEKHWKEVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQKAF---------PQ 90 D H K+ + ++ K ++V L L+ Sbjct: 536 VDRHTHAMIEASGKLVLIHKLLPKLKLGGHKVLVFSQMVRCLDILEDYLVHMKYPYERID 595 Query: 91 GRTL-DKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQM 147 GR + I +++ + + G G+NL + ++ F W+ + Q Sbjct: 596 GRVRGNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLT-AADTVIIFDSDWNPQNDLQA 654 Query: 148 IERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNAL 198 R + G R+V VY LI +N+ + + R K + +L ++ Sbjct: 655 QARC-----HRIGQSRSVKVYRLITRNSYEREMFDRASMKLGLDKAVLQSM 700 >gi|46137317|ref|XP_390350.1| hypothetical protein FG10174.1 [Gibberella zeae PH-1] Length = 1588 Score = 86.9 bits (214), Expect = 2e-15, Method: Composition-based stats. Identities = 31/231 (13%), Positives = 80/231 (34%), Gaps = 37/231 (16%) Query: 1 MKQYHKFQRELYCDLQGENIEAFNSASKTVKCLQL----ANGAVYYDEEKHWKEVH---- 52 M + + + ++ + S +QL + +Y + + Sbjct: 1023 MAKNPELIKAMF---SNSKMNKKERGSLNNILMQLRKCLCHPFMYSEAIEERHHDPTVLQ 1079 Query: 53 ------DEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQKAFP----QGRTLDKD--- 97 K+ L+V++ K +++ F L ++ R LD Sbjct: 1080 RNLVEASAKLLLLQVMLPKLQERGHRVLIFSQFLQQLDIIEDFLSGLGYDYRRLDGSIGS 1139 Query: 98 ---PCTIQEWNEGKIPLL--FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIG 152 I +N + P+ + G G+NL + ++ ++ + Q + R Sbjct: 1140 LEKQRRIDAFNAPESPVFAFLLSTRAGGVGINL-ATADTVIILDPDFNPHQDIQALSR-- 1196 Query: 153 VTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETI 203 + G K+ V + L+ ++++E ++Q + K + L+ ++ + + Sbjct: 1197 ---AHRIGQKKKVLCFQLMTIDSVEERIMQIGKKKMALDHALIESMDDDEL 1244 >gi|224139702|ref|XP_002323235.1| chromatin remodeling complex subunit [Populus trichocarpa] gi|222867865|gb|EEF04996.1| chromatin remodeling complex subunit [Populus trichocarpa] Length = 398 Score = 86.9 bits (214), Expect = 2e-15, Method: Composition-based stats. Identities = 33/166 (19%), Positives = 67/166 (40%), Gaps = 21/166 (12%) Query: 43 DEEKHWKEVHDEKIKALEVIIEKA----NAAPIIVAYHFNSDLARLQKAFPQGRTLD--- 95 + K K+ AL +++++ + + +V F+ LA +++ Sbjct: 216 ENPKKLSRTIPSKVSALIKLLKESRVVNSISKSVVFSLFDKMLALMEEPLEDAGFNTLRL 275 Query: 96 -------KDPCTIQEWNE-GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQM 147 + I++++ G +L A + G G+NL + + WW+ +Q Sbjct: 276 DASTDEIRQAEIIKKFSSAGADTVLLASLKTSGTGINLT-AASKVYLLEPWWNSAVEEQA 334 Query: 148 IERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDL 193 I R+ Q G + V + LIAQN+I+E +L+ K + Sbjct: 335 INRV-----HQYGQQENVRIVRLIAQNSIEERILEMQERKKVANEA 375 >gi|190347304|gb|EDK39551.2| hypothetical protein PGUG_03649 [Meyerozyma guilliermondii ATCC 6260] Length = 1117 Score = 86.9 bits (214), Expect = 2e-15, Method: Composition-based stats. Identities = 28/170 (16%), Positives = 59/170 (34%), Gaps = 27/170 (15%) Query: 53 DEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQK------------------AFPQGR 92 K+ L+ +++ ++ ++ L L+K Sbjct: 666 SGKMLVLKGLLQLWQSQGHRTLLFCQTKQMLDILEKLLVNLTRISDGTEYFNYMRMDGST 725 Query: 93 TLDKDPCTIQEWNEG-KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERI 151 + K + +N + G G+NL G + ++ + W+ Q ER Sbjct: 726 PISKRQGLVDMFNNNTNYDVFLLTTKVGGLGVNLT-GADRVIIYDPDWNPSTDIQARERA 784 Query: 152 GVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 + G KR + +Y L+ TI+E + R K+ + + +L K+ Sbjct: 785 W-----RLGQKRDIVIYRLMTAGTIEEKIYHRQIFKTFLTNKILKDPKQR 829 >gi|195116617|ref|XP_002002850.1| GI10771 [Drosophila mojavensis] gi|193913425|gb|EDW12292.1| GI10771 [Drosophila mojavensis] Length = 1908 Score = 86.9 bits (214), Expect = 2e-15, Method: Composition-based stats. Identities = 30/173 (17%), Positives = 63/173 (36%), Gaps = 20/173 (11%) Query: 40 VYYDEEKHWKEVHDEKIKALEVIIEKAN--AAPIIVAYHFNSDLA----RLQKAFPQGRT 93 + DE K+ L+ ++ + +++ L LQK + Sbjct: 835 LQQDEALQVLLKGSGKLVLLDKLLCRLKETGHRVLIFSQMVRMLDVLADYLQKRHFSFQR 894 Query: 94 LDK------DPCTIQEWN-EGKIPL-LFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQ 145 LD + +N EG + G G+NL + ++ F W+ + Sbjct: 895 LDGSIKGEMRRQALDHFNAEGSQDFCFLLSTRAGGLGINL-ATADTVIIFDSDWNPQNDL 953 Query: 146 QMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNAL 198 Q R + G K V +Y L+ +++E +++R + K + L++ + Sbjct: 954 QAQAR-----AHRIGQKNQVNIYRLVTARSVEEQIVERAKQKMVLDHLVIQRM 1001 >gi|260806897|ref|XP_002598320.1| hypothetical protein BRAFLDRAFT_204851 [Branchiostoma floridae] gi|229283592|gb|EEN54332.1| hypothetical protein BRAFLDRAFT_204851 [Branchiostoma floridae] Length = 490 Score = 86.9 bits (214), Expect = 2e-15, Method: Composition-based stats. Identities = 25/96 (26%), Positives = 43/96 (44%), Gaps = 9/96 (9%) Query: 104 WNEGKIP---LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 +N L + G G+NL G N ++ F W+ Q I R+ + G Sbjct: 375 FNSPDNERARLFLISTRAGGLGINL-VGANRVIIFDASWNPSHDVQSIFRV-----YRFG 428 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + VFVY +AQ T++E + R TK ++ +++ Sbjct: 429 QGKPVFVYRFLAQGTMEEKIYDRQVTKQSLAARVVD 464 >gi|198412736|ref|XP_002121526.1| PREDICTED: similar to SWI/SNF-related matrix-associated actin-dependent regulator of chromatin a4, partial [Ciona intestinalis] Length = 586 Score = 86.9 bits (214), Expect = 2e-15, Method: Composition-based stats. Identities = 30/157 (19%), Positives = 61/157 (38%), Gaps = 20/157 (12%) Query: 55 KIKALEVIIEKANA--APIIVAYHFNSDLARLQKAF---------PQGRTL-DKDPCTIQ 102 K + L+ ++ K +++ S + L+ F G T D +Q Sbjct: 56 KFELLDRVLPKLKKYNHRVLLFCQMTSTMTILEDYFAYRGHKYLRLDGSTKADDRGLMLQ 115 Query: 103 EWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 ++N I + + G GLNLQ + ++ + W+ + Q R + G Sbjct: 116 KFNAPNSDIFIFLLSTRAGGLGLNLQ-SADTVIIYDSDWNPHQDIQA-----QDRAHRIG 169 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 V V L+ ++++E +L R K + + ++ A Sbjct: 170 QTNEVRVLRLMTVSSVEEKILAAARYKLNVDEKVIQA 206 >gi|268572621|ref|XP_002641368.1| Hypothetical protein CBG13225 [Caenorhabditis briggsae] Length = 1077 Score = 86.9 bits (214), Expect = 2e-15, Method: Composition-based stats. Identities = 34/161 (21%), Positives = 69/161 (42%), Gaps = 22/161 (13%) Query: 56 IKALEVIIEKANAAPIIVAYHFNSDLARLQKAFP-----------QGRTLDKDPCTIQEW 104 ++ +E I+EK +++ + S L +++ Q + D+ + + Sbjct: 910 LEIVEDILEK--KEKVVIVSQWTSVLNLVEQHIQNGGHNYTSITGQVQVKDRQER-VDSF 966 Query: 105 N--EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFK 162 N +G ++ + G GGN LV L W+ QQ +RI + G K Sbjct: 967 NQEKGGARVMLLSL-TAGGVGLNLVGGNHLVMIDLHWNPALEQQACDRI-----YRMGQK 1020 Query: 163 RAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETI 203 + V+++ LI +NTI++ V++ K T+ +L+ + Sbjct: 1021 KPVYIHRLIVKNTIEQRVVELQEKKMTLAASVLDGTATRKM 1061 >gi|328802689|ref|NP_001179063.1| chromodomain-helicase-DNA-binding protein 8 [Bos taurus] Length = 2303 Score = 86.9 bits (214), Expect = 2e-15, Method: Composition-based stats. Identities = 29/177 (16%), Positives = 62/177 (35%), Gaps = 20/177 (11%) Query: 36 ANGAVYYDEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRT 93 A + +D K+ ++ ++ K A +++ L L+ Q R Sbjct: 836 ACHIIPHDFHLQAMVRSAGKLVLIDKLLPKLKAGGHKVLIFSQMVRCLDILEDYLIQRRY 895 Query: 94 L----------DKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDL 141 L + I +++ + + G G+NL + + F W+ Sbjct: 896 LYERIDGRVRGNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLT-AADTCIIFDSDWNP 954 Query: 142 EEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNAL 198 + Q R + G +AV VY LI +N+ + + + K + +L ++ Sbjct: 955 QNDLQAQARC-----HRIGQSKAVKVYRLITRNSYEREMFDKASLKLGLDKAVLQSM 1006 >gi|224044013|ref|XP_002188531.1| PREDICTED: chromodomain helicase DNA binding protein 1-like [Taeniopygia guttata] Length = 888 Score = 86.9 bits (214), Expect = 2e-15, Method: Composition-based stats. Identities = 23/142 (16%), Positives = 55/142 (38%), Gaps = 16/142 (11%) Query: 66 ANAAPIIVAYHFNSDLARLQKAFP---------QGRTLDKDPC-TIQEWNEGKIPLLFAH 115 A +++ L LQ G ++ I+ + + I + Sbjct: 351 AGGHRVLLFSQMTQLLDILQDYMDYRGYSYERLDGSVRGEERHLAIKNFGQQPIFIFLLS 410 Query: 116 PASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNT 175 + G G+NL + ++F ++ + Q I R + G + V + LI ++T Sbjct: 411 TRAGGVGMNLT-AADTVIFTDSDFNPQNDLQAIAR-----AHRIGQHKPVKIIRLIGRDT 464 Query: 176 IDELVLQRLRTKSTIQDLLLNA 197 ++E++ +R +K + + ++ Sbjct: 465 VEEIIYRRAASKLRLTNAIVEG 486 >gi|167534499|ref|XP_001748925.1| hypothetical protein [Monosiga brevicollis MX1] gi|163772605|gb|EDQ86255.1| predicted protein [Monosiga brevicollis MX1] Length = 524 Score = 86.9 bits (214), Expect = 2e-15, Method: Composition-based stats. Identities = 27/145 (18%), Positives = 57/145 (39%), Gaps = 18/145 (12%) Query: 65 KANAAPIIVAYHFNSDLARLQKAFPQGRTL----------DKDPCTIQEWNEGK--IPLL 112 KA +++ S + L+ FP + D+ +Q++N + Sbjct: 192 KATGHRVLIFCQMTSLITILEDFFPLIQIRSMRLDGATKADERASLLQQFNAADSDYDVF 251 Query: 113 FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIA 172 + G GLNLQ + ++ F W+ + Q R + G + V V+ + Sbjct: 252 VLSTRAGGLGLNLQT-ADTVIIFDSDWNPHQDLQA-----QDRAHRIGQQNEVRVFRFVT 305 Query: 173 QNTIDELVLQRLRTKSTIQDLLLNA 197 ++++E +L+ R K + ++ A Sbjct: 306 VHSVEESILEAARFKLDVDQKVIQA 330 >gi|149638070|ref|XP_001509622.1| PREDICTED: similar to helicase SMARCAD1 [Ornithorhynchus anatinus] Length = 872 Score = 86.9 bits (214), Expect = 2e-15, Method: Composition-based stats. Identities = 33/160 (20%), Positives = 64/160 (40%), Gaps = 19/160 (11%) Query: 51 VHDEKIKALEVIIEKAN--AAPIIVAYHFNSDLARL---------QKAFPQGRT-LDKDP 98 + K K LE I+ + +++ F L L + G+T + + Sbjct: 697 LDSGKFKTLEYILSELKQKGDRVVLFSQFTMMLDILEVLLKHHQHRYLRLDGKTQISERI 756 Query: 99 CTIQEWNEG-KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 I E+N I + + G G+NL N+++ + + +Q +R Sbjct: 757 HLIDEFNTDMGIFVFLLSTKAGGLGINLT-SANVVILHDIDCNPYNDKQAEDRC-----H 810 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + G + V V LI+Q TI+E +L+ + K ++ + A Sbjct: 811 RVGQTKEVQVIKLISQGTIEESMLKINQHKLKLEQDMTTA 850 >gi|50552109|ref|XP_503529.1| YALI0E04136p [Yarrowia lipolytica] gi|49649398|emb|CAG79108.1| YALI0E04136p [Yarrowia lipolytica] Length = 959 Score = 86.9 bits (214), Expect = 2e-15, Method: Composition-based stats. Identities = 27/157 (17%), Positives = 54/157 (34%), Gaps = 18/157 (11%) Query: 52 HDEKIKALEVIIEKANAAPIIVAYHFNSDLA-----RLQKAFPQGR------TLDKDPCT 100 K+ L ++ KA+ IV F +++ + +D Sbjct: 787 ASAKVVKLLELL-KADPRKTIVFSQFTKFFDVLEPFLIRENIRYVKYDGSMPIRKRDAAL 845 Query: 101 IQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 + +L GLNL N +V WW+ +Q I+R+ + G Sbjct: 846 ATLRADPDTTVLLCSLKCGALGLNLTC-ANRVVLLDPWWNPMVSEQAIDRV-----HRIG 899 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 V VY +++++ ++Q K + ++N Sbjct: 900 QTVDVDVYEFSVVDSVEKKIMQLQDKKRKLAGSVING 936 >gi|28972640|dbj|BAC65736.1| mKIAA1122 protein [Mus musculus] gi|148666357|gb|EDK98773.1| SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1`, isoform CRA_c [Mus musculus] Length = 1071 Score = 86.9 bits (214), Expect = 2e-15, Method: Composition-based stats. Identities = 31/157 (19%), Positives = 63/157 (40%), Gaps = 19/157 (12%) Query: 51 VHDEKIKALEVIIEKAN--AAPIIVAYHFNSDLARL---------QKAFPQGRT-LDKDP 98 + K +AL I+ + +++ F L L + G+T + + Sbjct: 896 LDSGKFRALGCILSELKQKGDRVVLFSQFTMMLDILEVLLKHHQHRYLRLDGKTQISERI 955 Query: 99 CTIQEWNEG-KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 I E+N I + + G G+NL N+++ + + +Q +R Sbjct: 956 HLIDEFNTDMDIFVFLLSTKAGGLGINLT-SANVVILHDIDCNPYNDKQAEDRC-----H 1009 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 + G + V V LI+Q TI+E +L+ + K ++ + Sbjct: 1010 RVGQTKEVLVIKLISQGTIEESMLKINQQKLKLEQDM 1046 >gi|309359914|emb|CAP32046.2| hypothetical protein CBG_13225 [Caenorhabditis briggsae AF16] Length = 1082 Score = 86.9 bits (214), Expect = 2e-15, Method: Composition-based stats. Identities = 34/161 (21%), Positives = 69/161 (42%), Gaps = 22/161 (13%) Query: 56 IKALEVIIEKANAAPIIVAYHFNSDLARLQKAFP-----------QGRTLDKDPCTIQEW 104 ++ +E I+EK +++ + S L +++ Q + D+ + + Sbjct: 915 LEIVEDILEK--KEKVVIVSQWTSVLNLVEQHIQNGGHNYTSITGQVQVKDRQER-VDSF 971 Query: 105 N--EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFK 162 N +G ++ + G GGN LV L W+ QQ +RI + G K Sbjct: 972 NQEKGGARVMLLSL-TAGGVGLNLVGGNHLVMIDLHWNPALEQQACDRI-----YRMGQK 1025 Query: 163 RAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETI 203 + V+++ LI +NTI++ V++ K T+ +L+ + Sbjct: 1026 KPVYIHRLIVKNTIEQRVVELQEKKMTLAASVLDGTATRKM 1066 >gi|327304687|ref|XP_003237035.1| DNA repair protein RAD16 [Trichophyton rubrum CBS 118892] gi|326460033|gb|EGD85486.1| DNA repair protein RAD16 [Trichophyton rubrum CBS 118892] Length = 935 Score = 86.9 bits (214), Expect = 2e-15, Method: Composition-based stats. Identities = 29/168 (17%), Positives = 56/168 (33%), Gaps = 21/168 (12%) Query: 51 VHDEKIKALE-VIIEKANAA---PIIVAYHFNSDLA----RLQKAFPQGRTLDKDPCTIQ 102 KI+ L + + N IV F S L RL +A LD +Q Sbjct: 759 TSSTKIEMLVFDLCQLRNKKRTNKSIVFSQFTSMLQLVEWRLHRAGISTVMLDGSMSPVQ 818 Query: 103 EWN-------EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTR 155 + + G LNL + + WW+ Q +R Sbjct: 819 RQRSIDYFMKNVDTEVFLVSLKAGGVALNLTEASRVFI-VDPWWNPAAEWQSADRC---- 873 Query: 156 QRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETI 203 + G +R + L +++++ ++ K+ + + +N + E + Sbjct: 874 -HRIGQRRPCVITRLCIEDSVESRMVLLQEKKANMINGTINKDQSEAL 920 >gi|302658647|ref|XP_003021025.1| hypothetical protein TRV_04890 [Trichophyton verrucosum HKI 0517] gi|291184900|gb|EFE40407.1| hypothetical protein TRV_04890 [Trichophyton verrucosum HKI 0517] Length = 921 Score = 86.9 bits (214), Expect = 2e-15, Method: Composition-based stats. Identities = 35/182 (19%), Positives = 70/182 (38%), Gaps = 24/182 (13%) Query: 27 SKTVKCLQLANGAVYYDEEKHWKEV----HDEKIKALEVIIEK---ANAAPIIVAYHFNS 79 ++ C +L + A E+ + +V KI+AL I+ A +V + S Sbjct: 718 AEIKDCSELVSPAAELGEDCNQIDVESDSSSSKIQALIKILTAKGQAAGTKTVVFSQWTS 777 Query: 80 DLARLQKAFP-----------QGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYG 128 L ++ + + +D + + + ++ A C GLNL Sbjct: 778 FLDLIEPHLVLYNINFARIDGKMNSAQRDAAMSKFSRDSECTVMLASLNVCSVGLNL-VA 836 Query: 129 GNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKS 188 N +V WW Q ++R+ + G R ++ L+ +N+I++ VL + K Sbjct: 837 ANQVVLADSWWAPAIEDQAVDRV-----YRLGQTRPTTIWRLVMENSIEDRVLDIQKEKR 891 Query: 189 TI 190 + Sbjct: 892 EL 893 >gi|221058551|ref|XP_002259921.1| DNA helicase [Plasmodium knowlesi strain H] gi|193809994|emb|CAQ41188.1| DNA helicase, putative [Plasmodium knowlesi strain H] Length = 1445 Score = 86.9 bits (214), Expect = 2e-15, Method: Composition-based stats. Identities = 45/206 (21%), Positives = 80/206 (38%), Gaps = 45/206 (21%) Query: 28 KTVKCLQLANGAVYYDEEKHWKE---VHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLA 82 K++K LQ N + D K K+ V+ K+K L I+ N I+V + L Sbjct: 1213 KSLKTLQ-ENKSPLDDLLKKMKKENFVYSTKLKQLFDHIQDDMKNELHIVVFSQWIGFLK 1271 Query: 83 RLQKA----------FPQGRTLDKDPCTIQEWN--EGKI--------------------- 109 +QK + T ++ T+ +N +GK+ Sbjct: 1272 IIQKLLTLHNIPNKIYDGSLTYEERKTTLLWFNIQKGKVYQPGIGFTKPSSPIPVENVSG 1331 Query: 110 PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYY 169 +L + G GLNL + + LWW+ Q ER+ + G + V +Y Sbjct: 1332 KVLLCSLKAGGVGLNLTVS-SKVYLMDLWWNPAIEDQAFERV-----HRIGQLKDVSIYK 1385 Query: 170 LIAQNTIDELVLQRLRTKSTIQDLLL 195 + + T++E +LQ ++K + +L Sbjct: 1386 FVLEKTVEERILQIHQSKQYTANQIL 1411 >gi|164660548|ref|XP_001731397.1| hypothetical protein MGL_1580 [Malassezia globosa CBS 7966] gi|159105297|gb|EDP44183.1| hypothetical protein MGL_1580 [Malassezia globosa CBS 7966] Length = 999 Score = 86.9 bits (214), Expect = 2e-15, Method: Composition-based stats. Identities = 27/161 (16%), Positives = 62/161 (38%), Gaps = 20/161 (12%) Query: 52 HDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQ----------KAFPQGRTLDKDPC 99 H K+ L+ ++ + A+ +++ L L + + D Sbjct: 618 HSGKMVLLDKLLARLKADNHRVLIFSQMVHMLDILSDYLSLRGYVHQRLDGTVSSDTRKR 677 Query: 100 TIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 I +N + P + G G+NL + ++ F W+ + Q + R Sbjct: 678 AIDHFNAPQSPDFCFLLSTRAGGLGINL-ETADTVIIFDSDWNPQNDLQAMSR-----AH 731 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNAL 198 + K + V+ + + T++E VL+R + K ++ ++N + Sbjct: 732 RLNSKFHINVFRFLTKGTVEEDVLERAKQKMGLEYAIINQM 772 >gi|73946637|ref|XP_860229.1| PREDICTED: similar to SWI/SNF-related matrix-associated actin-dependent regulator of chromatin a2 isoform b isoform 17 [Canis familiaris] Length = 1553 Score = 86.9 bits (214), Expect = 2e-15, Method: Composition-based stats. Identities = 39/226 (17%), Positives = 79/226 (34%), Gaps = 37/226 (16%) Query: 3 QYHKFQRELYCDLQGENIEAFNSA-SKTVKCLQLANGAVYYDEEKHWKEV---------- 51 Y Q + G + A + +QL + +H ++V Sbjct: 963 LYRHMQAKGILLTDGSEKDKKGGAKTLMNTIMQLRKICNHPYMFQHIEDVLPPKSVAVLG 1022 Query: 52 ------HDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAF---------PQGRTL 94 K + L+ I+ +A +++ S + ++ F G T Sbjct: 1023 MYNLYRASGKFELLDRILPKLRATNHRVLLFCQMTSLMTIMEDYFAFRNFLYLRLDGTTK 1082 Query: 95 DKDPCTI-QEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERI 151 +D + +++NE + + + G GLNLQ + +V F W+ + Q Sbjct: 1083 SEDRAALLKKFNEPGSQYFIFLLSTRAGGLGLNLQ-AADTVVIFDSDWNPHQDLQA---- 1137 Query: 152 GVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 R + G + V V L N+++E +L + K + ++ A Sbjct: 1138 -QDRAHRIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQA 1182 >gi|301117680|ref|XP_002906568.1| chromodomain-helicase-DNA-binding protein 1 [Phytophthora infestans T30-4] gi|262107917|gb|EEY65969.1| chromodomain-helicase-DNA-binding protein 1 [Phytophthora infestans T30-4] Length = 875 Score = 86.9 bits (214), Expect = 2e-15, Method: Composition-based stats. Identities = 38/228 (16%), Positives = 77/228 (33%), Gaps = 37/228 (16%) Query: 7 FQRELYCDLQGENIEAFNSAS--------KTVKCLQL--ANGAVYYDEEKHWKEV----- 51 QR Y ++ +N E N A+ QL A Y + Sbjct: 297 MQRAYYKEVIAKNAEVLNRAARAQGNRVPLLNILPQLRKACNHPYLFPGAEPEPFVEGSH 356 Query: 52 ---HDEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQKAF---------PQGRTLDKD 97 + K+ L I+ + +++ L +Q G K+ Sbjct: 357 LYENSGKLFVLHQILPRLKQKGHRVLLFSQSPPFLDIIQDFLTLESFAYERIDGSVRGKE 416 Query: 98 P-CTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTR 155 I+ + + + + + G GLNLQ + ++F ++ + Q I R Sbjct: 417 RWQCIERFKKDPETFVFLISTRAGGLGLNLQ-SADTVIFADSDYNPQTDLQAIAR----- 470 Query: 156 QRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETI 203 + G + + V + NT++E + +R K + D + N ++ + Sbjct: 471 AYRLGQTKPIHVIKFLCANTVEESIYRRSLKKMRMADRIRNLARRTNV 518 >gi|987661|dbj|BAA05142.1| transcriptional activator hSNF2a [Homo sapiens] Length = 1572 Score = 86.9 bits (214), Expect = 2e-15, Method: Composition-based stats. Identities = 31/160 (19%), Positives = 63/160 (39%), Gaps = 20/160 (12%) Query: 52 HDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAF---------PQGRTLDKDPCT 100 K + L+ I+ +A +++ S + ++ F G T +D Sbjct: 1048 ASGKFELLDRILPKLRATNHRVLLFCQMTSLMTIMEDYFAFRNFLYLRLDGTTKSEDRAA 1107 Query: 101 I-QEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 + +++NE + + + G GLNLQ + +V F W+ + Q R Sbjct: 1108 LLKKFNEPGSQYFIFLLSTRAGGLGLNLQ-AAHTVVIFDSDWNPHQDLQA-----QDRAH 1161 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + G + V V L N+++E +L + K + ++ A Sbjct: 1162 RIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQA 1201 >gi|296228587|ref|XP_002759879.1| PREDICTED: chromodomain-helicase-DNA-binding protein 1-like [Callithrix jacchus] Length = 862 Score = 86.9 bits (214), Expect = 2e-15, Method: Composition-based stats. Identities = 36/217 (16%), Positives = 81/217 (37%), Gaps = 35/217 (16%) Query: 1 MKQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDE--------EKHWKEVH 52 MK F+ E G+ ++ N S+ KC + +D H E Sbjct: 259 MKDLDAFENET-----GKKVKLQNILSQLRKC---VDHPYLFDGVEPEPFEVGDHLIE-A 309 Query: 53 DEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAFP---------QGRTLDKDPC-T 100 K+ L+ ++ + +++ L LQ G ++ Sbjct: 310 SGKLHLLDKLLAFLYSRGHRVLLFSQMTQMLDILQDYMDYRGYSYERVDGSVRGEERHLA 369 Query: 101 IQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 I+ + + I + + G G+NL + ++F ++ + Q R + G Sbjct: 370 IKNFGQQPIFVFLLSTRAGGVGMNLT-AADTVIFVDSDFNPQNDLQAAAR-----AHRIG 423 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 ++V V LI ++T++E+V ++ +K + ++++ Sbjct: 424 QNKSVKVIRLIGRDTVEEIVYRKAASKLQLTNMIIEG 460 >gi|299751451|ref|XP_001830276.2| hypothetical protein CC1G_01912 [Coprinopsis cinerea okayama7#130] gi|298409380|gb|EAU91423.2| hypothetical protein CC1G_01912 [Coprinopsis cinerea okayama7#130] Length = 1032 Score = 86.9 bits (214), Expect = 2e-15, Method: Composition-based stats. Identities = 23/94 (24%), Positives = 39/94 (41%), Gaps = 6/94 (6%) Query: 111 LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYL 170 ++ + GLNL N + WW Q ++R+ + G K+ V VY L Sbjct: 910 VMLISLKAGALGLNLTV-ANHVYLMDPWWQEGIESQAVDRVN-----RIGQKKPVHVYQL 963 Query: 171 IAQNTIDELVLQRLRTKSTIQDLLLNALKKETIH 204 IA+NT++ VL+ K + + +K Sbjct: 964 IAENTVESKVLEIQDRKKQLVKQAFSGIKSRETQ 997 >gi|156059716|ref|XP_001595781.1| hypothetical protein SS1G_03871 [Sclerotinia sclerotiorum 1980] gi|154701657|gb|EDO01396.1| hypothetical protein SS1G_03871 [Sclerotinia sclerotiorum 1980 UF-70] Length = 2189 Score = 86.9 bits (214), Expect = 2e-15, Method: Composition-based stats. Identities = 28/163 (17%), Positives = 63/163 (38%), Gaps = 22/163 (13%) Query: 51 VHDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAFP-----------QGRTLDKD 97 K + LE+++ +A +++ F L ++ TL+K Sbjct: 1171 DASSKFQLLEIMLPKLQARGHRVLIFSQFLKQLDLVEDFLNGLELPFQRLDGTVSTLEKQ 1230 Query: 98 PCTIQEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTR 155 I +N K+ + G G+NL + ++ ++ + Q + R Sbjct: 1231 KR-IDAFNAPNSKLFAFLLSTRAGGVGINL-ATADTVIIMDPDFNPHQDIQALSR----- 1283 Query: 156 QRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNAL 198 + G K+ V V+ L+ + + +E ++Q R K + L+ ++ Sbjct: 1284 AHRIGQKKKVLVFQLVTKGSAEEQIVQVGRKKMALDQALIESI 1326 >gi|256078496|ref|XP_002575531.1| chromodomain helicase DNA binding protein [Schistosoma mansoni] gi|238660772|emb|CAZ31764.1| chromodomain helicase DNA binding protein, putative [Schistosoma mansoni] Length = 1825 Score = 86.9 bits (214), Expect = 2e-15, Method: Composition-based stats. Identities = 22/151 (14%), Positives = 51/151 (33%), Gaps = 18/151 (11%) Query: 65 KANAAPIIVAYHFNSDLARLQKAF---------PQGRTLDK-DPCTIQEWN-EGKIPL-L 112 K+ +++ L + G + + +N EG Sbjct: 802 KSKGHRVLIFSQMVRMLDLIADYLSLRGWGFQRLDGSIRGEVRKQALDHFNCEGSTDFCF 861 Query: 113 FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIA 172 + G G+NL + ++ F W+ + Q R + G + V VY + Sbjct: 862 LLSTRAGGLGINL-ATADTVIIFDSDWNPQNDLQAQAR-----AHRIGQTKQVSVYRFVT 915 Query: 173 QNTIDELVLQRLRTKSTIQDLLLNALKKETI 203 + +++E +++ K + L++ + I Sbjct: 916 RESVEEKIIESATRKMVLDHLVIQRMDSAGI 946 >gi|242000110|ref|XP_002434698.1| chromodomain helicase DNA binding protein, putative [Ixodes scapularis] gi|215498028|gb|EEC07522.1| chromodomain helicase DNA binding protein, putative [Ixodes scapularis] Length = 1882 Score = 86.9 bits (214), Expect = 2e-15, Method: Composition-based stats. Identities = 20/138 (14%), Positives = 46/138 (33%), Gaps = 18/138 (13%) Query: 65 KANAAPIIVAYHFNSDLARLQ----------KAFPQGRTLDKDPCTIQEWNEGKIP--LL 112 K +++ L ++ + G T + I +N P Sbjct: 1045 KETGHRVLIFSQMTKMLDIMEDFLEAEGYKYERIDGGITGSQRQEAIDRFNAPNAPQFCF 1104 Query: 113 FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIA 172 + G G+NL + ++ + W+ Q +R + G V +Y + Sbjct: 1105 LLSTRAGGLGINL-ATADTVIIYDSDWNPHNDIQA-----FSRAHRIGQANKVMIYRFVT 1158 Query: 173 QNTIDELVLQRLRTKSTI 190 + +++E + Q + K + Sbjct: 1159 RASVEERITQVAKKKMML 1176 >gi|170594229|ref|XP_001901866.1| BRM protein [Brugia malayi] gi|158590810|gb|EDP29425.1| BRM protein, putative [Brugia malayi] Length = 1412 Score = 86.9 bits (214), Expect = 2e-15, Method: Composition-based stats. Identities = 34/172 (19%), Positives = 65/172 (37%), Gaps = 22/172 (12%) Query: 43 DEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTL------ 94 D K + L+ ++ K A+ I++ S L + + + R Sbjct: 892 DVSGKDLYRVSGKFELLDRVLPKLKASGHRILMFCQMTS-LMTIMEDYLNYREFKYLRLD 950 Query: 95 -----DKDPCTIQEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQM 147 D+ ++ +N + + + G GLNLQ + ++ F W+ + Q Sbjct: 951 GSTKPDERGQLLELYNAPNSEYFIFMLSTRAGGLGLNLQT-ADTVIIFDSDWNPHQDMQA 1009 Query: 148 IERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 R + G R V V L+ N+I+E +L R K + + ++ A K Sbjct: 1010 -----QDRAHRIGQSREVRVLRLVTVNSIEEKILAAARYKLNVDEKVIQAGK 1056 >gi|297797399|ref|XP_002866584.1| hypothetical protein ARALYDRAFT_496587 [Arabidopsis lyrata subsp. lyrata] gi|297312419|gb|EFH42843.1| hypothetical protein ARALYDRAFT_496587 [Arabidopsis lyrata subsp. lyrata] Length = 1097 Score = 86.9 bits (214), Expect = 2e-15, Method: Composition-based stats. Identities = 28/164 (17%), Positives = 61/164 (37%), Gaps = 19/164 (11%) Query: 40 VYYDEEKHWKEVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQKAF--------- 88 V D+ + + K+ + +++ +++ L +Q + Sbjct: 725 VDTDDFQTKNDSISCKLSFIMSLLDNLIPEGHRVLIFSQTRKMLNLIQDSLTSNGYSFLR 784 Query: 89 PQGRTLDKDP-CTIQEWNEGKI-PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 G T D T++E+ EG + P+ G GL L + ++ W+ Q Sbjct: 785 IDGTTKAPDRLKTVEEFQEGHVAPIFLLTSQVGGLGLTLTK-ADRVIVVDPAWNPSTDNQ 843 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 ++R + G + V VY L+ T++E + ++ K + Sbjct: 844 SVDR-----AYRIGQTKDVIVYRLMTSATVEEKIYRKQVYKGGL 882 >gi|221485219|gb|EEE23509.1| hypothetical protein TGGT1_105260 [Toxoplasma gondii GT1] Length = 1244 Score = 86.9 bits (214), Expect = 2e-15, Method: Composition-based stats. Identities = 37/147 (25%), Positives = 65/147 (44%), Gaps = 18/147 (12%) Query: 67 NAAPIIVAYHFNSDLARLQKAF---------PQGRT-LDKDPCTIQEWN-EGKIPLLFAH 115 +IV H + L +++ GRT DK ++E+ + Sbjct: 959 GGMKVIVFAHHRAVLDYIEEFLQAEMKRTIRIDGRTPQDKREQLVKEFQTSPSCQVALLS 1018 Query: 116 PASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFK-RAVFVYYLIAQN 174 +CGHGLNL G +VF L+W + Q +R + G + +V ++YLIA+ Sbjct: 1019 ITACGHGLNLTAAG-TVVFAELYWVPGQMIQAEDR-----SHRIGTEFSSVQIHYLIAEG 1072 Query: 175 TIDELVLQRLRTKSTIQDLLLNALKKE 201 T+DE V + L+ K + L+ +++ Sbjct: 1073 TLDETVFRILQRKWRLMTSTLDGEQQQ 1099 >gi|237842313|ref|XP_002370454.1| SNF2 family N-terminal domain-containing protein [Toxoplasma gondii ME49] gi|211968118|gb|EEB03314.1| SNF2 family N-terminal domain-containing protein [Toxoplasma gondii ME49] gi|221502587|gb|EEE28307.1| helicase, putative [Toxoplasma gondii VEG] Length = 1231 Score = 86.9 bits (214), Expect = 2e-15, Method: Composition-based stats. Identities = 37/147 (25%), Positives = 65/147 (44%), Gaps = 18/147 (12%) Query: 67 NAAPIIVAYHFNSDLARLQKAF---------PQGRT-LDKDPCTIQEWN-EGKIPLLFAH 115 +IV H + L +++ GRT DK ++E+ + Sbjct: 946 GGMKVIVFAHHRAVLDYIEEFLQAEAKRTIRIDGRTPQDKREQLVKEFQTSPSCQVALLS 1005 Query: 116 PASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFK-RAVFVYYLIAQN 174 +CGHGLNL G +VF L+W + Q +R + G + +V ++YLIA+ Sbjct: 1006 ITACGHGLNLTAAG-TVVFAELYWVPGQMIQAEDR-----SHRIGTEFSSVQIHYLIAEG 1059 Query: 175 TIDELVLQRLRTKSTIQDLLLNALKKE 201 T+DE V + L+ K + L+ +++ Sbjct: 1060 TLDETVFRILQRKWRLMTSTLDGEQQQ 1086 >gi|260942529|ref|XP_002615563.1| hypothetical protein CLUG_04445 [Clavispora lusitaniae ATCC 42720] gi|238850853|gb|EEQ40317.1| hypothetical protein CLUG_04445 [Clavispora lusitaniae ATCC 42720] Length = 819 Score = 86.9 bits (214), Expect = 2e-15, Method: Composition-based stats. Identities = 25/167 (14%), Positives = 55/167 (32%), Gaps = 23/167 (13%) Query: 45 EKHWKEVHDEKIKALEV----IIEKANAAPIIVAYHFNSDLARLQKAFPQG--------- 91 W+ KI+AL + + IV F S L ++ + Sbjct: 641 GGEWR--SSTKIEALVEELYRLRSDRHTIKSIVFSQFTSMLDLIEWRLKRAGFETVKLQG 698 Query: 92 --RTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIE 149 +D + + + G LNL + + WW+ Q ++ Sbjct: 699 SMSPQQRDRTIKHFMENTNVEIFLVSLKAGGVALNLCE-ASQVFLMDPWWNPSVEWQSMD 757 Query: 150 RIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 R+ + G KR + + +++I+ +++ K+ + +N Sbjct: 758 RV-----HRIGQKRPIRITRFCIEDSIESKIIELQEKKANMIHATIN 799 >gi|209882890|ref|XP_002142880.1| SNF2 family helicase [Cryptosporidium muris RN66] gi|209558486|gb|EEA08531.1| SNF2 family helicase, putative [Cryptosporidium muris RN66] Length = 1313 Score = 86.5 bits (213), Expect = 2e-15, Method: Composition-based stats. Identities = 35/218 (16%), Positives = 83/218 (38%), Gaps = 28/218 (12%) Query: 3 QYHKFQRELY--CDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 Y + +++ D+ I+ + ++ ++ ++ N + +E + K+ Sbjct: 749 VYGQIKQKAVHSMDISSGKIQYRSVSNTIMQLRKIVNHPYLFVDEYFARNDDIFKVSCKF 808 Query: 61 VIIEKA------NAAPIIVAYHFNSDLARLQKAFPQGR-----------TLDKDPCTIQE 103 I+++ +++ L + F R + + + Sbjct: 809 EILDRMIPKLVYFKHKVLIFCQMTQ-LMDILGDFLDYRDISYYRLDGTMNIQERKEKMDI 867 Query: 104 WNEGK--IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGF 161 +N+ + + G GLNLQ + ++ F W+ + Q +R + G Sbjct: 868 FNDPDSNTFVFMLSTRAGGLGLNLQ-AADTVIIFDSDWNPHQDLQA-----QSRAHRMGQ 921 Query: 162 KRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 K V V+ L++ + ++ELVL+R + K I ++ A K Sbjct: 922 KNEVRVFRLVSISGVEELVLKRAQKKLDIDQKIIQAGK 959 >gi|170034569|ref|XP_001845146.1| chromodomain helicase DNA binding protein [Culex quinquefasciatus] gi|167875927|gb|EDS39310.1| chromodomain helicase DNA binding protein [Culex quinquefasciatus] Length = 5423 Score = 86.5 bits (213), Expect = 2e-15, Method: Composition-based stats. Identities = 23/146 (15%), Positives = 53/146 (36%), Gaps = 18/146 (12%) Query: 65 KANAAPIIVAYHFNSDLARLQKAFP---------QGRTL-DKDPCTIQEWNEGKIP--LL 112 KAN +++ L L+ GR + I +++ + Sbjct: 2492 KANGHRVLIFSQMVRCLDILEDYLIYRKYPFERIDGRIRGNLRQAAIDRYSKPDSDRFVF 2551 Query: 113 FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIA 172 + G G+NL + ++ + W+ + Q R + G ++ V +Y L+ Sbjct: 2552 LLCTKAGGLGINLT-AADTVIIYDSDWNPQNDLQAQARC-----HRIGQQKMVKIYRLLC 2605 Query: 173 QNTIDELVLQRLRTKSTIQDLLLNAL 198 +NT + + + K + +L ++ Sbjct: 2606 RNTYEREMFDKASMKLGLDKAILQSM 2631 >gi|146416597|ref|XP_001484268.1| hypothetical protein PGUG_03649 [Meyerozyma guilliermondii ATCC 6260] Length = 1117 Score = 86.5 bits (213), Expect = 2e-15, Method: Composition-based stats. Identities = 28/170 (16%), Positives = 59/170 (34%), Gaps = 27/170 (15%) Query: 53 DEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQK------------------AFPQGR 92 K+ L+ +++ ++ ++ L L+K Sbjct: 666 SGKMLVLKGLLQLWQSQGHRTLLFCQTKQMLDILEKLLVNLTRISDGTEYFNYMRMDGST 725 Query: 93 TLDKDPCTIQEWNEG-KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERI 151 + K + +N + G G+NL G + ++ + W+ Q ER Sbjct: 726 PISKRQGLVDMFNNNTNYDVFLLTTKVGGLGVNLT-GADRVIIYDPDWNPSTDIQARERA 784 Query: 152 GVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 + G KR + +Y L+ TI+E + R K+ + + +L K+ Sbjct: 785 W-----RLGQKRDIVIYRLMTAGTIEEKIYHRQIFKTFLTNKILKDPKQR 829 >gi|115334572|dbj|BAF33276.1| chromodomain helicase DNA binding protein 1 [Eudromia elegans] Length = 301 Score = 86.5 bits (213), Expect = 2e-15, Method: Composition-based stats. Identities = 24/114 (21%), Positives = 48/114 (42%), Gaps = 11/114 (9%) Query: 97 DPCTIQEWN-EGKIPL-LFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 + +N EG + G G+NL + +V F W+ + Q R Sbjct: 34 RKQALDHFNAEGSEDFCFLLSTRAGGLGINL-ASADTVVIFDSDWNPQNDLQAQAR---- 88 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL---LNALKKETIHV 205 + G K+ V +Y L+ + +++E +L+R + K + L+ ++ K +H Sbjct: 89 -AHRIGQKKQVNIYRLVTKGSVEEDILERAKKKMVLDHLVIQRMDTTGKTVLHT 141 >gi|156052062|ref|XP_001591992.1| hypothetical protein SS1G_07439 [Sclerotinia sclerotiorum 1980] gi|154705216|gb|EDO04955.1| hypothetical protein SS1G_07439 [Sclerotinia sclerotiorum 1980 UF-70] Length = 1863 Score = 86.5 bits (213), Expect = 2e-15, Method: Composition-based stats. Identities = 34/156 (21%), Positives = 65/156 (41%), Gaps = 18/156 (11%) Query: 53 DEKIKALEVIIEKAN--AAPIIVAYHFNSDLARL---------QKAFPQGRT-LDKDPCT 100 K++ L I++ + ++V L L + A G+T + K Sbjct: 1291 SNKVRILCQILDASKAVGDKVLVFSQTLVTLDFLEDMCKEQGRKYARLDGKTAMGKRQAI 1350 Query: 101 IQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 ++++N + L + G GLNL YG N +V F + + E + R + G Sbjct: 1351 VKDFNSNNLELYLISTNAGGLGLNL-YGANRVVIFDF-----RYNPINEEQAIGRAYRIG 1404 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 K+ VFVY L+A T + + + K+ + +++ Sbjct: 1405 QKKHVFVYRLMAAGTFENSIQNKAVFKTQLASRVVD 1440 >gi|109504572|ref|XP_341481.3| PREDICTED: RAD26L hypothetical protein isoform 2 [Rattus norvegicus] gi|109505337|ref|XP_001058999.1| PREDICTED: similar to putative repair and recombination helicase RAD26L isoform 1 [Rattus norvegicus] Length = 1533 Score = 86.5 bits (213), Expect = 2e-15, Method: Composition-based stats. Identities = 31/152 (20%), Positives = 62/152 (40%), Gaps = 19/152 (12%) Query: 53 DEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQK---------AFPQGRTLDKDP-CT 100 K+K L+ ++ + + +++ L LQ+ G T ++ Sbjct: 505 SGKMKVLDQLLNHFRKHRDKVLLFSFSTKLLDVLQQYCMASGLDYRRLDGSTKSEERLKI 564 Query: 101 IQEWNEG-KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQA 159 ++E+N + + + G GLN G N+++ F W+ Q I+R + Sbjct: 565 VKEFNSSQDVNICLVSTMAGGLGLNF-IGANVVILFDPTWNPANDLQAIDR-----AYRI 618 Query: 160 GFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQ 191 G R V V+ LI+ T++E++ R K + Sbjct: 619 GQCRDVKVFRLISLGTVEEIMYLRQVYKQQLH 650 >gi|224013540|ref|XP_002296434.1| predicted protein [Thalassiosira pseudonana CCMP1335] gi|220968786|gb|EED87130.1| predicted protein [Thalassiosira pseudonana CCMP1335] Length = 1089 Score = 86.5 bits (213), Expect = 2e-15, Method: Composition-based stats. Identities = 31/157 (19%), Positives = 59/157 (37%), Gaps = 24/157 (15%) Query: 55 KIKALEVIIEKANAA----PIIVAYHFNSDLARLQKAFP----------QGRTLDKDPCT 100 K+ L +IE +I+ +F + L ++ + G + Sbjct: 713 KLIVLSSLIESIREHHPTDKVIITSNFTTALTVVENSILRKKNLPFIRLDGSVDNASRQP 772 Query: 101 I-QEWNEGKIP---LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 I +N + + G GLNL G N L+ W+ QQ++ R+ Sbjct: 773 IVDSFNNNSVNHSFAFTLSSKAGGCGLNL-IGANRLIMVDADWNPATDQQVMARV----- 826 Query: 157 RQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDL 193 + G K+ ++Y + T++E++ QR K + L Sbjct: 827 YRQGQKKPCYIYRMFTTGTVEEVIFQRQTQKGNLAKL 863 >gi|242775674|ref|XP_002478688.1| DNA excision repair protein Rad16, putative [Talaromyces stipitatus ATCC 10500] gi|218722307|gb|EED21725.1| DNA excision repair protein Rad16, putative [Talaromyces stipitatus ATCC 10500] Length = 949 Score = 86.5 bits (213), Expect = 2e-15, Method: Composition-based stats. Identities = 29/168 (17%), Positives = 57/168 (33%), Gaps = 21/168 (12%) Query: 51 VHDEKIKALE----VIIEKANAAPIIVAYHFNSDLA----RLQKAFPQGRTLDKDPCTIQ 102 KI+ L + K IV F S L RL++A LD Q Sbjct: 773 TSSTKIEMLVYDLYKLRSKKQTHKSIVFSQFTSMLQLVEWRLRRAGFNTVMLDGSMTPAQ 832 Query: 103 EWN-------EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTR 155 N + + + G LNL + + WW+ Q +R Sbjct: 833 RQNSIDHFMKNVDVEVFLVSLKAGGVALNLTEASRVFI-VDPWWNPAAEWQSADRC---- 887 Query: 156 QRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETI 203 + G +R + L +++++ ++ K+ + + +N + + + Sbjct: 888 -HRIGQRRPCVITRLCIEDSVESRMVALQEKKANMINGTINKDQGDAL 934 >gi|297802844|ref|XP_002869306.1| hypothetical protein ARALYDRAFT_328538 [Arabidopsis lyrata subsp. lyrata] gi|297315142|gb|EFH45565.1| hypothetical protein ARALYDRAFT_328538 [Arabidopsis lyrata subsp. lyrata] Length = 1221 Score = 86.5 bits (213), Expect = 2e-15, Method: Composition-based stats. Identities = 27/158 (17%), Positives = 60/158 (37%), Gaps = 20/158 (12%) Query: 52 HDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQ-----KAFPQGRTLDK-----DPC 99 K++ L+ ++ K +++ F L Q K++ R K Sbjct: 524 ASGKLQLLDKMMVKLKEQGHRVLIYSQFQHTLDLFQDYCSFKSWKYERIDGKVGGAERQA 583 Query: 100 TIQEWN--EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 +I +N + G G+NL + ++ + W+ Q + R Sbjct: 584 SIDRFNAENSNRFCFLLTTRAGGIGINL-ATADTVIIYDSDWNPHADLQAMAR-----AH 637 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 + G V +Y LI + T++E +++ + K ++ L++ Sbjct: 638 RLGQTNKVMIYRLIHRATVEERMVEITKKKMLLEHLVV 675 >gi|194899382|ref|XP_001979239.1| GG24840 [Drosophila erecta] gi|190650942|gb|EDV48197.1| GG24840 [Drosophila erecta] Length = 932 Score = 86.5 bits (213), Expect = 2e-15, Method: Composition-based stats. Identities = 34/156 (21%), Positives = 62/156 (39%), Gaps = 22/156 (14%) Query: 52 HDEKIK----ALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQG--RTLD--------KD 97 K++ LE ++ N IIV + S L ++K TLD Sbjct: 755 PSAKLQLIINKLEELLTGTNDK-IIVTSQWVSYLTIIRKRLQDLSWETLDFNGQLSAKDR 813 Query: 98 PCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 +Q++N +L + G GLNL ++L+ L W+ + +Q +RI Sbjct: 814 ELVLQDFNTNNDKRVLLLSLTAGGVGLNLNVANHMLI-VDLHWNPQLERQAQDRI----- 867 Query: 157 RQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQD 192 + G + F+Y + Q+T+++ + K I Sbjct: 868 YRYGQTKPTFIYRYMCQDTVEQRIKSLQDYKLNIAK 903 >gi|195354288|ref|XP_002043630.1| GM15785 [Drosophila sechellia] gi|194127798|gb|EDW49841.1| GM15785 [Drosophila sechellia] Length = 1921 Score = 86.5 bits (213), Expect = 2e-15, Method: Composition-based stats. Identities = 24/150 (16%), Positives = 54/150 (36%), Gaps = 20/150 (13%) Query: 55 KIKALEVIIEK--ANAAPIIVAYHFNSDLARLQ----------KAFPQGRTLDKDPCTIQ 102 K+ L ++++ A +++ L L+ + G T I Sbjct: 992 KLVLLSKMLKQLKAQNHRVLIFSQMTKMLDILEDFLEGEQYKYERIDGGITGTLRQEAID 1051 Query: 103 EWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 +N + + + G G+NL + ++ + W+ Q +R + G Sbjct: 1052 RFNAPGAQQFVFLLSTRAGGLGINL-ATADTVIIYDSDWNPHNDIQA-----FSRAHRIG 1105 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 V +Y + +N+++E V Q + K + Sbjct: 1106 QANKVMIYRFVTRNSVEERVTQVAKRKMML 1135 >gi|115334540|dbj|BAF33260.1| chromodomain helicase DNA binding protein 1 [Struthio camelus] Length = 301 Score = 86.5 bits (213), Expect = 2e-15, Method: Composition-based stats. Identities = 24/114 (21%), Positives = 48/114 (42%), Gaps = 11/114 (9%) Query: 97 DPCTIQEWN-EGKIPL-LFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 + +N EG + G G+NL + +V F W+ + Q R Sbjct: 31 RNQALDHFNAEGSEDFCFLLSTRAGGLGINL-ASADTVVIFDSDWNPQNDLQAQAR---- 85 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL---LNALKKETIHV 205 + G K+ V +Y L+ + +++E +L+R + K + L+ ++ K +H Sbjct: 86 -AHRIGQKKQVNIYRLVTKGSVEEDILERAKKKMVLDHLVIQRMDTTGKTVLHT 138 >gi|194391058|dbj|BAG60647.1| unnamed protein product [Homo sapiens] Length = 434 Score = 86.5 bits (213), Expect = 2e-15, Method: Composition-based stats. Identities = 34/216 (15%), Positives = 79/216 (36%), Gaps = 33/216 (15%) Query: 1 MKQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYD-------EEKHWKEVHD 53 MK F+ E + ++ N S+ KC + +D E Sbjct: 195 MKDLDAFENET-----AKKVKLQNILSQLRKC---VDHPYLFDGVEPEPFEVGDHLTEAS 246 Query: 54 EKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAFP---------QGRTLDKDPC-TI 101 K+ L+ ++ + +++ L LQ G ++ I Sbjct: 247 GKLHLLDKLLAFLYSGGHRVLLFSQMTQMLDILQDYMDYRGYSYERVDGSVRGEERHLAI 306 Query: 102 QEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGF 161 + + + I + + G G+NL + ++F ++ + Q R + G Sbjct: 307 KNFGQQPIFVFLLSTRAGGVGMNLT-AADTVIFVDSDFNPQNDLQAAAR-----AHRVGQ 360 Query: 162 KRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 ++V V LI ++T++E+V ++ +K + ++++ Sbjct: 361 NKSVKVIRLIGRDTVEEIVYRKAASKLQLTNMIIEG 396 >gi|68468463|ref|XP_721791.1| hypothetical protein CaO19.1720 [Candida albicans SC5314] gi|68468704|ref|XP_721671.1| hypothetical protein CaO19.9288 [Candida albicans SC5314] gi|46443600|gb|EAL02881.1| hypothetical protein CaO19.9288 [Candida albicans SC5314] gi|46443729|gb|EAL03009.1| hypothetical protein CaO19.1720 [Candida albicans SC5314] Length = 864 Score = 86.5 bits (213), Expect = 2e-15, Method: Composition-based stats. Identities = 30/190 (15%), Positives = 75/190 (39%), Gaps = 28/190 (14%) Query: 28 KTVKCLQLANG-AVYYD----EEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSD 80 K ++ + N +YY+ ++ + K + L ++ ++ +++ F Sbjct: 581 KMIQLRNICNSPFIYYNYPILDQAEVIR-NSAKFQVLNQLLPPLLSSGHKVLIFAQFTKV 639 Query: 81 LARLQK------------AFPQGRTLD--KDPCTIQEWNEGKIPLLFAHPASCGHGLNLQ 126 L L+ G T +D Q N K + + + G G+NL Sbjct: 640 LDLLEDWLEESPLSHGKICRLDGSTNHQIRDEQISQFNNNPKFKVFLSSTRAGGLGINL- 698 Query: 127 YGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRT 186 + ++ W+ + Q I+R+ + G V ++ + +++I+E+++ R + Sbjct: 699 VAADTVILMDNDWNPQMDLQAIDRV-----HRIGQINPVKIFRFVIKDSIEEVLISRSGS 753 Query: 187 KSTIQDLLLN 196 K ++ L++ Sbjct: 754 KRFLERLVIQ 763 >gi|52545542|emb|CAH56404.1| hypothetical protein [Homo sapiens] Length = 1059 Score = 86.5 bits (213), Expect = 2e-15, Method: Composition-based stats. Identities = 22/160 (13%), Positives = 54/160 (33%), Gaps = 20/160 (12%) Query: 45 EKHWKEVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQ----------KAFPQGR 92 + K+ L+ +++K +++ L L+ + G Sbjct: 397 DGSSLVKSSGKLMLLQKMLKKLRDEGHRLLIFSQMTKMLDLLEDFLEYEGYKYERIDGGI 456 Query: 93 TLDKDPCTIQEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 T I +N + + G G+NL + ++ + W+ Q Sbjct: 457 TGGLRQEAIDRFNAPGAQQFCFLLSTRAGGLGINL-ATADTVIIYDSDWNPHNDIQA--- 512 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 +R + G + V +Y + + +++E + Q + K + Sbjct: 513 --FSRAHRIGQNKKVMIYRFVTRASVEERITQVAKRKMML 550 >gi|194760843|ref|XP_001962642.1| GF14337 [Drosophila ananassae] gi|190616339|gb|EDV31863.1| GF14337 [Drosophila ananassae] Length = 1891 Score = 86.5 bits (213), Expect = 2e-15, Method: Composition-based stats. Identities = 29/173 (16%), Positives = 63/173 (36%), Gaps = 20/173 (11%) Query: 40 VYYDEEKHWKEVHDEKIKALEVIIEKAN--AAPIIVAYHFNSDLARL-----QKAFPQGR 92 + DE K+ L+ ++ + +++ L L ++ FP R Sbjct: 820 LQQDEALQTLLKGSGKLVLLDKLLCRLKETGHRVLIFSQMVRMLDVLADYLQKRHFPFQR 879 Query: 93 TLDK-----DPCTIQEWN-EGKIPL-LFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQ 145 + +N EG + G G+NL + ++ F W+ + Sbjct: 880 LDGSIKGEMRRQALDHFNAEGSQDFCFLLSTRAGGLGINL-ATADTVIIFDSDWNPQNDL 938 Query: 146 QMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNAL 198 Q R + G K V +Y L+ +++E +++R + K + L++ + Sbjct: 939 QAQAR-----AHRIGQKNQVNIYRLVTARSVEEQIVERAKQKMVLDHLVIQRM 986 >gi|114558330|ref|XP_001157925.1| PREDICTED: chromodomain helicase DNA binding protein 1-like isoform 6 [Pan troglodytes] Length = 791 Score = 86.5 bits (213), Expect = 2e-15, Method: Composition-based stats. Identities = 35/217 (16%), Positives = 79/217 (36%), Gaps = 35/217 (16%) Query: 1 MKQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDE--------EKHWKEVH 52 MK F+ E + ++ N S+ KC + +D H E Sbjct: 295 MKDLDAFENET-----AKKVKLQNILSQLRKC---VDHPYLFDGVEPEPFEVGDHLIE-A 345 Query: 53 DEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAFP---------QGRTLDKDPC-T 100 K+ L+ ++ + +++ L LQ G ++ Sbjct: 346 SGKLHLLDKLLAFLYSGGHRVLLFSQMTQMLDILQDYMDYRGYSYERVDGSVRGEERHLA 405 Query: 101 IQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 I+ + I + + G G+NL + ++F ++ + Q R + G Sbjct: 406 IKNFGRQPIFVFLLSTRAGGVGMNLT-AADTVIFVDSDFNPQNDLQAAAR-----AHRIG 459 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 ++V V LI ++T++E+V ++ +K + ++++ Sbjct: 460 QNKSVKVIRLIGRDTVEEIVYRKAASKLQLTNMIIEG 496 >gi|7243213|dbj|BAA92654.1| KIAA1416 protein [Homo sapiens] Length = 1967 Score = 86.5 bits (213), Expect = 2e-15, Method: Composition-based stats. Identities = 34/233 (14%), Positives = 78/233 (33%), Gaps = 42/233 (18%) Query: 2 KQYHK-FQRE-LYCDLQGENIEAFNSASKTVKCLQLANGAVYYDE----------EKHWK 49 K Y ++ + G N + ++ + N + E H Sbjct: 454 KYYRAILEKNFTFLSKGGGQANVPNLLNTMMELRKCCNHPYLINGAEEKILEEFKETHNA 513 Query: 50 EVHDEKIKALEV------IIEK------ANAAPIIVAYHFNSDLAR-----LQKAFPQGR 92 E D +++A+ +I+K A +++ L +Q+ +P R Sbjct: 514 ESPDFQLQAMIQAAGKLVLIDKLLPKLKAGGHRVLIFSQMVRCLDILEDYLIQRRYPYER 573 Query: 93 TLDK-----DPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQ 145 + I +++ + + G G+NL + + F W+ + Sbjct: 574 IDGRVRGNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLT-AADTCIIFDSDWNPQNDL 632 Query: 146 QMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNAL 198 Q R + G ++V +Y LI +N+ + + + K + +L ++ Sbjct: 633 QAQARC-----HRIGQSKSVKIYRLITRNSYEREMFDKASLKLGLDKAVLQSM 680 >gi|121713600|ref|XP_001274411.1| nucleosome remodeling complex ATPase subunit (Snf2h), putative [Aspergillus clavatus NRRL 1] gi|119402564|gb|EAW12985.1| nucleosome remodeling complex ATPase subunit (Snf2h), putative [Aspergillus clavatus NRRL 1] Length = 657 Score = 86.5 bits (213), Expect = 2e-15, Method: Composition-based stats. Identities = 31/156 (19%), Positives = 63/156 (40%), Gaps = 25/156 (16%) Query: 52 HDEKIKALEVIIE---KANAAPIIVAYHFNS------DLARLQK----AFPQGRTLDKDP 98 + K AL+ +++ + +I+ +F DL + + AF R + Sbjct: 508 NSGKFIALQKLLKHYVEVENTKVIIFSNFEQALNLCEDLVMIMQGTSPAFEYLRLDGRTT 567 Query: 99 CTIQE------WNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIG 152 ++ N+ + + G GLNL ++++F W+ + +Q Sbjct: 568 SPWRKLMVYLFQNDPSYMIFLLSIRAAGEGLNLT-SSSVVIFLDEDWNPQVMKQA----- 621 Query: 153 VTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKS 188 +R + G R V +Y L + T++E + QRL K+ Sbjct: 622 ESRAHRIGQSRPVRIYKLRSSGTVEEQMSQRLAKKA 657 >gi|254566309|ref|XP_002490265.1| Protein that recognizes and binds damaged DNA in an ATP-dependent manner (with Rad7p) [Pichia pastoris GS115] gi|238030061|emb|CAY67984.1| Protein that recognizes and binds damaged DNA in an ATP-dependent manner (with Rad7p) [Pichia pastoris GS115] gi|328350658|emb|CCA37058.1| hypothetical protein PP7435_Chr1-0923 [Pichia pastoris CBS 7435] Length = 816 Score = 86.5 bits (213), Expect = 2e-15, Method: Composition-based stats. Identities = 26/168 (15%), Positives = 55/168 (32%), Gaps = 23/168 (13%) Query: 44 EEKHWKEVHDEKIKAL-EVIIEKANAA---PIIVAYHFNSDLARLQKAFPQG-------- 91 W+ KI+AL E + + IV F S L ++ + Sbjct: 637 MGGEWR--SSTKIEALVEELFHLRSDRVTIKSIVFSQFTSMLDLVEWRLKRAGFETVKLQ 694 Query: 92 ---RTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMI 148 L ++ + + + G LNL + + WW+ Q Sbjct: 695 GSMSPLQRESTIKHFMETPSVEVFLVSLKAGGVALNLCEASQVFIL-DPWWNPSVEWQSG 753 Query: 149 ERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 +R+ + G R V + +++I+ +++ K+ + +N Sbjct: 754 DRV-----HRIGQHRPVKITRFCIEDSIESRIIELQDKKANMIHATIN 796 >gi|224126629|ref|XP_002329602.1| chromatin remodeling complex subunit [Populus trichocarpa] gi|222870311|gb|EEF07442.1| chromatin remodeling complex subunit [Populus trichocarpa] Length = 148 Score = 86.5 bits (213), Expect = 2e-15, Method: Composition-based stats. Identities = 34/128 (26%), Positives = 52/128 (40%), Gaps = 17/128 (13%) Query: 72 IVAYHFNSDLARLQ----------KAFPQGRTLDKDPCTIQEWNE-GKIPLLFAHPASCG 120 IV + S L L+ F + T++E+NE + +L + G Sbjct: 3 IVFSQWTSFLDLLEIPLKRRGIGFLRFDGKLAQKQRERTLKEFNETREKMVLLMSLKAGG 62 Query: 121 HGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELV 180 GLNL N + WW+ +Q I RI + G KR VFV I ++T++E + Sbjct: 63 VGLNLTAASN-VFLMDPWWNPAVEEQAIMRI-----HRIGQKRTVFVRRFIVESTVEERL 116 Query: 181 LQRLRTKS 188 Q K Sbjct: 117 QQVQAKKQ 124 >gi|154338886|ref|XP_001565665.1| helicase-like protein [Leishmania braziliensis MHOM/BR/75/M2904] gi|134062717|emb|CAM39160.1| putative helicase-like protein [Leishmania braziliensis MHOM/BR/75/M2904] Length = 974 Score = 86.5 bits (213), Expect = 2e-15, Method: Composition-based stats. Identities = 27/164 (16%), Positives = 58/164 (35%), Gaps = 20/164 (12%) Query: 51 VHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQ----------KAFPQGRTLDKDP 98 K++ L+ ++ + A ++ +F + L L+ + + Sbjct: 498 DPSAKMRYLDTLLPQLKAQGHRCLIFSNFTTTLDLLEAVCQLRGHSYERLDGSCNRVERE 557 Query: 99 CTIQEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 + +N L + G G+ L G + ++ F ++R R Sbjct: 558 LAMLRYNHPASSCFLFLVTTTAGGVGVTLT-GADTVILFD-----AHFNPQLDRQAADRA 611 Query: 157 RQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKK 200 + G R V VY L Q TI+E + K+ + D ++ ++ Sbjct: 612 HRIGQTRVVRVYRLCLQGTIEEHIRDIAARKAYLGDFIVEGGQR 655 >gi|302813768|ref|XP_002988569.1| hypothetical protein SELMODRAFT_128228 [Selaginella moellendorffii] gi|300143676|gb|EFJ10365.1| hypothetical protein SELMODRAFT_128228 [Selaginella moellendorffii] Length = 601 Score = 86.5 bits (213), Expect = 2e-15, Method: Composition-based stats. Identities = 24/143 (16%), Positives = 54/143 (37%), Gaps = 19/143 (13%) Query: 65 KANAAPIIVAYHFNSDLARLQKAFPQ-----------GRTLDKDPCTIQEWNEGKIPLLF 113 K+ +++ L L+ + + D+ I EG + Sbjct: 380 KSRGHRVLIFSQMTKMLDILEFCLGERGMPPFRLDGNVKQEDRQEQVITFSREG--FVFL 437 Query: 114 AHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQ 173 + G G+NL + + + W+ + Q ++R + G R V VY L Sbjct: 438 LSTRAGGLGINLT-SADTAIIYDSDWNPQMDLQAMDRC-----HRIGQTRPVHVYRLATA 491 Query: 174 NTIDELVLQRLRTKSTIQDLLLN 196 ++++ +L+ +K ++ L++N Sbjct: 492 HSVECRMLKVANSKLQLETLVIN 514 >gi|302665600|ref|XP_003024409.1| hypothetical protein TRV_01372 [Trichophyton verrucosum HKI 0517] gi|291188462|gb|EFE43798.1| hypothetical protein TRV_01372 [Trichophyton verrucosum HKI 0517] Length = 974 Score = 86.5 bits (213), Expect = 2e-15, Method: Composition-based stats. Identities = 29/168 (17%), Positives = 56/168 (33%), Gaps = 21/168 (12%) Query: 51 VHDEKIKALE-VIIEKANAA---PIIVAYHFNSDLA----RLQKAFPQGRTLDKDPCTIQ 102 KI+ L + + N IV F S L RL +A LD +Q Sbjct: 798 TSSTKIEMLVFDLCQLRNKKRTNKSIVFSQFTSMLQLVEWRLHRAGISTVMLDGSMSPVQ 857 Query: 103 EWN-------EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTR 155 + + G LNL + + WW+ Q +R Sbjct: 858 RQRSIDYFMKNVDTEVFLVSLKAGGVALNLTEASRVFI-VDPWWNPAAEWQSADRC---- 912 Query: 156 QRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETI 203 + G +R + L +++++ ++ K+ + + +N + E + Sbjct: 913 -HRIGQRRPCVITRLCIEDSVESRMVLLQEKKANMINGTINKDQSEAL 959 >gi|134055452|emb|CAK43967.1| unnamed protein product [Aspergillus niger] Length = 1670 Score = 86.5 bits (213), Expect = 2e-15, Method: Composition-based stats. Identities = 27/162 (16%), Positives = 62/162 (38%), Gaps = 20/162 (12%) Query: 54 EKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQKAFPQGRTLD----------KDPCTI 101 K + LE+++ K +++ F +L ++ + TI Sbjct: 960 AKFQLLELMLPKLKNRGHRVLIFSQFLENLDIIEDFLEGVGLTYLRLDGRMSSLEKQKTI 1019 Query: 102 QEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQA 159 +N + P S G G+NL + ++ ++ + Q + R + Sbjct: 1020 DAYNAEESPYFAFLLSTRSGGVGINL-ATADTVIIMDPDFNPHQDMQALSR-----AHRI 1073 Query: 160 GFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 G K V V+ L+ + + +E ++Q + K + +L++ + E Sbjct: 1074 GQKNKVLVFQLMTRASAEEKIMQIGKKKMVLDHVLIDRMVSE 1115 >gi|156544560|ref|XP_001602612.1| PREDICTED: similar to chromodomain helicase DNA binding protein [Nasonia vitripennis] Length = 1837 Score = 86.5 bits (213), Expect = 2e-15, Method: Composition-based stats. Identities = 23/143 (16%), Positives = 53/143 (37%), Gaps = 18/143 (12%) Query: 68 AAPIIVAYHFNSDLARL-----QKAFPQGRTLDK-----DPCTIQEWNEGKIP--LLFAH 115 +++ L L ++ FP R + +N Sbjct: 770 GHRVLIFSQMVRMLDILSEYLQKRHFPFQRLDGSIKGELRKQALDHFNAPGSQDFCFLLS 829 Query: 116 PASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNT 175 + G G+NL + ++ F W+ + Q R + G K V +Y L+ +++ Sbjct: 830 TRAGGLGINL-ATADTVIIFDSDWNPQNDLQAQAR-----AHRIGQKNQVNIYRLVTKSS 883 Query: 176 IDELVLQRLRTKSTIQDLLLNAL 198 ++E +++R + K + L++ + Sbjct: 884 VEEEIVERAKQKMVLDHLVIQRM 906 >gi|154291059|ref|XP_001546116.1| hypothetical protein BC1G_15417 [Botryotinia fuckeliana B05.10] gi|150847107|gb|EDN22300.1| hypothetical protein BC1G_15417 [Botryotinia fuckeliana B05.10] Length = 1110 Score = 86.5 bits (213), Expect = 2e-15, Method: Composition-based stats. Identities = 31/162 (19%), Positives = 62/162 (38%), Gaps = 19/162 (11%) Query: 39 AVYYDEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQK---------- 86 + + K + K+ AL ++ K N +++ F+ L L+ Sbjct: 869 CIKSFDVKKNAWMDSGKVSALVELVTKYKENGDRVLIFSQFSLVLDILESVLNTSMITYT 928 Query: 87 AFPQGRTLDKDPCTIQEWNEG-KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQ 145 +D+ I+ + + I + G G+NL Y N ++ F ++ ++ Sbjct: 929 RIDGATKIDERQSLIERFRDDTDITAFLLTTKAGGTGINLMY-ANKVIIFDGSFNPQDDV 987 Query: 146 QMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTK 187 Q R + G R V V L+ + TI+E + + R+K Sbjct: 988 QA-----ENRAHRVGQTRDVEVVRLVTRGTIEEAIWKMGRSK 1024 >gi|299754940|ref|XP_001828301.2| hypothetical protein CC1G_02882 [Coprinopsis cinerea okayama7#130] gi|298410995|gb|EAU93652.2| hypothetical protein CC1G_02882 [Coprinopsis cinerea okayama7#130] Length = 836 Score = 86.5 bits (213), Expect = 2e-15, Method: Composition-based stats. Identities = 30/165 (18%), Positives = 60/165 (36%), Gaps = 19/165 (11%) Query: 53 DEKIKALEVIIEKANAA--PIIVAYHFNSDLARLQKAFP-----------QGRTLDKDPC 99 K + + ++ + ++ F + L L + T + Sbjct: 663 SSKFQVVLGLLRRHYRKNEKTLIFSSFVTVLDVLSECLDAHGIGHVRYDGSMSTKARQEA 722 Query: 100 TIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQA 159 + + ++ S G GLN+ N+++ WW+ +Q I R + Sbjct: 723 LDSIVQDDESMVMLVSIKSGGTGLNITSCNNVVIL-DPWWNPYVEEQAISR-----AHRL 776 Query: 160 GFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIH 204 G ++ V VY + A NT+++ + + K I D L + TIH Sbjct: 777 GQEKEVNVYRITAPNTVEDKICKTQHRKFNIIDPLQDRCAATTIH 821 >gi|321461806|gb|EFX72834.1| hypothetical protein DAPPUDRAFT_215757 [Daphnia pulex] Length = 1614 Score = 86.5 bits (213), Expect = 2e-15, Method: Composition-based stats. Identities = 25/118 (21%), Positives = 45/118 (38%), Gaps = 9/118 (7%) Query: 85 QKAFPQGRTLDKDPCTI-QEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDL 141 + G T D + + +N+ L + G GLNLQ + ++ F W+ Sbjct: 1078 KYLRLDGTTKADDRGDLLKRFNDKSSDYFLFLLSTRAGGLGLNLQ-AADTVIIFDSDWNP 1136 Query: 142 EEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 + Q R + G V V L+ +++E +L R K + ++ A K Sbjct: 1137 HQDLQA-----QDRAHRIGQTNEVRVLRLMTVGSVEERILAAARYKLNMDQKVIQAGK 1189 >gi|301623501|ref|XP_002941055.1| PREDICTED: probable global transcription activator SNF2L2 [Xenopus (Silurana) tropicalis] Length = 1559 Score = 86.5 bits (213), Expect = 2e-15, Method: Composition-based stats. Identities = 32/160 (20%), Positives = 63/160 (39%), Gaps = 20/160 (12%) Query: 52 HDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAF---------PQGRTLDKDPCT 100 K + L+ I+ +A +++ S + ++ F G T +D + Sbjct: 1035 TSGKFELLDRILPKLRATNHRVLLFCQMTSLMTIMEDYFAFRNFLYLRLDGTTKSEDRAS 1094 Query: 101 I-QEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 + + +NE P + + G GLNLQ + +V F W+ + Q R Sbjct: 1095 LLKRFNEEGSPFFIFLLSTRAGGLGLNLQ-AADTVVIFDSDWNPHQDLQA-----QDRAH 1148 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + G + V V L N+++E +L + K + ++ A Sbjct: 1149 RIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQA 1188 >gi|118104167|ref|XP_425043.2| PREDICTED: similar to RP11-346B7.2 [Gallus gallus] Length = 1132 Score = 86.5 bits (213), Expect = 2e-15, Method: Composition-based stats. Identities = 31/149 (20%), Positives = 62/149 (41%), Gaps = 19/149 (12%) Query: 53 DEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQK---------AFPQGRTLDKDP-CT 100 K++ L+ ++ + N +++ L L++ G T +D Sbjct: 509 SGKMRVLQQLLNHFRKNKDKVLLFSFSTKLLDVLEQYCIASGLDFRRLDGSTKSEDRIRI 568 Query: 101 IQEWNE-GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQA 159 ++E+N +I + + G GLN G N+++ F W+ Q I+R + Sbjct: 569 VREFNRVPEINICLVSTMAGGLGLNF-VGANVVILFDPTWNPANDLQAIDR-----AYRI 622 Query: 160 GFKRAVFVYYLIAQNTIDELVLQRLRTKS 188 G + V V+ LI+ T++E++ R K Sbjct: 623 GQCKDVKVFRLISLGTVEEMMYLRQVYKQ 651 >gi|319411618|emb|CBQ73662.1| probable RAD16-nucleotide excision repair protein [Sporisorium reilianum] Length = 1070 Score = 86.5 bits (213), Expect = 2e-15, Method: Composition-based stats. Identities = 25/159 (15%), Positives = 56/159 (35%), Gaps = 21/159 (13%) Query: 52 HDEKIKALEV----IIEKANAAPIIVAYHFNSDLARLQKAFPQGRTL----------DKD 97 KI+AL + + +V F + L + + + Sbjct: 897 SSTKIEALVEELTQLRSEDKTIKSLVFSQFVNFLDLIAFRLQRAGFQICRLEGNMSPEAR 956 Query: 98 PCTIQEW-NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 TI+ + + + + G LNL + + WW+ Q ++RI Sbjct: 957 NRTIKHFMENPGVTVFLVSLKAGGVALNLTE-ASRVYLMDPWWNPSVEVQAMDRI----- 1010 Query: 157 RQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 + G R + V ++ +N+I+ +++ KS + + + Sbjct: 1011 HRLGQHRPIIVKRMVIENSIESRIIELQNKKSAMIEAAI 1049 >gi|158296578|ref|XP_316961.4| AGAP008482-PA [Anopheles gambiae str. PEST] gi|157014777|gb|EAA12280.5| AGAP008482-PA [Anopheles gambiae str. PEST] Length = 4793 Score = 86.5 bits (213), Expect = 2e-15, Method: Composition-based stats. Identities = 23/146 (15%), Positives = 55/146 (37%), Gaps = 18/146 (12%) Query: 65 KANAAPIIVAYHFNSDLARLQ-----KAFPQGRTLDK-----DPCTIQEWNEGKIP--LL 112 +AN +++ L L+ K +P R + I +++ + Sbjct: 2188 RANGHRVLIFSQMVRCLDILEDYLMYKKYPFERIDGRIRGNLRQAAIDRYSKPDSDRFVF 2247 Query: 113 FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIA 172 + G G+NL + ++ + W+ + Q R + G ++ V +Y L+ Sbjct: 2248 LLCTKAGGLGINLT-AADTVIIYDSDWNPQNDLQAQARC-----HRIGQQKMVKIYRLLC 2301 Query: 173 QNTIDELVLQRLRTKSTIQDLLLNAL 198 +NT + + + K + +L ++ Sbjct: 2302 RNTYEREMFDKASLKLGLDKAVLQSM 2327 >gi|39974235|ref|XP_368508.1| hypothetical protein MGG_00736 [Magnaporthe oryzae 70-15] gi|145018332|gb|EDK02611.1| hypothetical protein MGG_00736 [Magnaporthe oryzae 70-15] Length = 1685 Score = 86.5 bits (213), Expect = 2e-15, Method: Composition-based stats. Identities = 23/149 (15%), Positives = 54/149 (36%), Gaps = 18/149 (12%) Query: 65 KANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD----------PCTIQEWNEG--KIPLL 112 K +++ F L ++ L + I E+N ++ Sbjct: 1165 KEKGHRVLIFSQFLDQLDIIEDFLAGLGFLYQRLDGTMSSLEKQKRIDEFNAPSSELFAF 1224 Query: 113 FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIA 172 + G G+NL + ++ ++ + Q + R + G V + L+ Sbjct: 1225 LLSTRAGGVGINL-ATADTVIIMDPDFNPHQDLQALSR-----AHRIGQMNKVLCFQLMT 1278 Query: 173 QNTIDELVLQRLRTKSTIQDLLLNALKKE 201 + +++E ++Q R K + +L+ A+ E Sbjct: 1279 KGSVEEKIMQIGRKKMALDHVLIEAMDDE 1307 >gi|224081014|ref|XP_002306264.1| chromatin remodeling complex subunit [Populus trichocarpa] gi|222855713|gb|EEE93260.1| chromatin remodeling complex subunit [Populus trichocarpa] Length = 1058 Score = 86.5 bits (213), Expect = 2e-15, Method: Composition-based stats. Identities = 31/180 (17%), Positives = 66/180 (36%), Gaps = 21/180 (11%) Query: 26 ASKTVKC-LQLANGAVYYDEEKHWKEVH-DEKIKALEVIIEKA--NAAPIIVAYHFNSDL 81 A+ K + LA+ A D + K + KI + +++ +++ L Sbjct: 695 AAVAEKLAMHLADVADRTDTDFQEKHDNISCKISFILSLLDNLIPEGHNVLIFSQTRKML 754 Query: 82 ARLQKAF---------PQGRTLDKDP-CTIQEWNEGK-IPLLFAHPASCGHGLNLQYGGN 130 +Q++ G T D + ++ EG P+ G GL L + Sbjct: 755 NLIQESLVSNGYEFIRIDGTTKATDRTKIVSDFQEGNGAPIFLLTSQVGGLGLTLTK-AD 813 Query: 131 ILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 ++ W+ Q ++R + G + V VY L+ +++E + ++ K + Sbjct: 814 RVIVVDPAWNPSTDNQSVDR-----AYRIGQMKDVVVYRLMTCGSVEEKIYRKQIFKGGL 868 >gi|221057846|ref|XP_002261431.1| SNF2 family protein [Plasmodium knowlesi strain H] gi|194247436|emb|CAQ40836.1| SNF2 family protein, putative [Plasmodium knowlesi strain H] Length = 2872 Score = 86.5 bits (213), Expect = 2e-15, Method: Composition-based stats. Identities = 27/140 (19%), Positives = 53/140 (37%), Gaps = 18/140 (12%) Query: 69 APIIVAYHFNSDLARLQ-----KAFPQGRTLDKDPC-----TIQEWNEGK--IPLLFAHP 116 +++ F L L+ + + R I+E+N + Sbjct: 1200 HKVLIFTQFQLVLDELEEYCKYRCWKYMRLDGSTNKLIRELDIREFNLNDSIYFIYLIST 1259 Query: 117 ASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTI 176 + G G+NL N ++ + W+ Q I+R + G KR V V+ L+ + T+ Sbjct: 1260 RAGGLGINLT-AANHVIMYDEDWNPFIDLQAIDR-----AHRIGQKREVNVWKLMTEWTV 1313 Query: 177 DELVLQRLRTKSTIQDLLLN 196 +E + R K + L++ Sbjct: 1314 EERMAFRREQKLKLDKLVVQ 1333 >gi|326435151|gb|EGD80721.1| serine/threonine protein kinase [Salpingoeca sp. ATCC 50818] Length = 4337 Score = 86.5 bits (213), Expect = 2e-15, Method: Composition-based stats. Identities = 23/104 (22%), Positives = 48/104 (46%), Gaps = 8/104 (7%) Query: 95 DKDPCTIQEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIG 152 ++ I ++N ++ + G+NL + N ++ F + W+ Q I Sbjct: 3848 EERTEKIAKFNSALSNAAIMIISHRAGRAGINL-HSANRVILFDVDWNPASDNQAI---- 3902 Query: 153 VTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 TR + G K V VY L+A+ T+++ + ++ TK + L++ Sbjct: 3903 -TRAHRYGQKLPVVVYRLVARGTLEQRIYEKQVTKEVLSQRLVD 3945 >gi|320580749|gb|EFW94971.1| SNF2 family DNA-dependent ATPase [Pichia angusta DL-1] Length = 1485 Score = 86.5 bits (213), Expect = 2e-15, Method: Composition-based stats. Identities = 20/160 (12%), Positives = 59/160 (36%), Gaps = 19/160 (11%) Query: 56 IKALEVIIEKANAAPIIVAYHFN------------SDLARLQKAFPQGRTLDKDPCTIQE 103 + ++ I+E +IV F + L+ K Sbjct: 796 LTLIKDILETKPGEKVIVFSQFMVLFDILELFLRDHGIEYLRYDGSMNVEA-KSASVATF 854 Query: 104 WNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKR 163 + + ++ + GL L ++++ +W+ +Q +R+ + R Sbjct: 855 YQDPNKKVMLLSLKAGNVGLTLTCASHVIIL-EPFWNPFVEKQAQDRV-----HRISQVR 908 Query: 164 AVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETI 203 V+V+ ++ +NT+++ +++ K + + L+ ++ + Sbjct: 909 EVYVHRILIRNTVEDRIIELQAEKEKLVESALDPTARQQV 948 >gi|308274464|emb|CBX31063.1| hypothetical protein N47_E45750 [uncultured Desulfobacterium sp.] Length = 413 Score = 86.5 bits (213), Expect = 2e-15, Method: Composition-based stats. Identities = 37/175 (21%), Positives = 69/175 (39%), Gaps = 16/175 (9%) Query: 32 CLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARL-----QK 86 C AN D++ E+I L ++ II+ + + L + + Sbjct: 108 CRMAANSTFLVDKQPPGYSSKLEEIDMLLENLKAEKDRKIILFSEWTTMLNLIEPVLEKH 167 Query: 87 AFPQGRTLDKDPC-----TIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDL 141 R P I + + +F + GLNLQ + ++ L W+ Sbjct: 168 KLDYVRLDGSVPQKMRLSLINRFQKDPECKVFISTNAGSTGLNLQ-AADTVINVDLPWNP 226 Query: 142 EEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 +Q RIG R + G KR V V+ ++ ++T++E +L+ L +K + L+ Sbjct: 227 AVLEQ---RIG--RAHRMGQKRPVQVFLMVTKDTLEESLLETLSSKHALFLAALD 276 >gi|302501310|ref|XP_003012647.1| hypothetical protein ARB_00897 [Arthroderma benhamiae CBS 112371] gi|291176207|gb|EFE32007.1| hypothetical protein ARB_00897 [Arthroderma benhamiae CBS 112371] Length = 828 Score = 86.5 bits (213), Expect = 2e-15, Method: Composition-based stats. Identities = 29/168 (17%), Positives = 56/168 (33%), Gaps = 21/168 (12%) Query: 51 VHDEKIKALE-VIIEKANAA---PIIVAYHFNSDLA----RLQKAFPQGRTLDKDPCTIQ 102 KI+ L + + N IV F S L RL +A LD +Q Sbjct: 652 TSSTKIEMLVFDLCQLRNRKRTNKSIVFSQFTSMLQLVEWRLHRAGISTVMLDGSMSPVQ 711 Query: 103 EWN-------EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTR 155 + + G LNL + + WW+ Q +R Sbjct: 712 RQRSIDYFMKNVDTEVFLVSLKAGGVALNLTEASRVFI-VDPWWNPAAEWQSADRC---- 766 Query: 156 QRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETI 203 + G +R + L +++++ ++ K+ + + +N + E + Sbjct: 767 -HRIGQRRPCVITRLCIEDSVESRMVLLQEKKANMINGTINKDQSEAL 813 >gi|301092506|ref|XP_002997108.1| chromatin structure-remodeling complex subunit snf21-like protein [Phytophthora infestans T30-4] gi|262111604|gb|EEY69656.1| chromatin structure-remodeling complex subunit snf21-like protein [Phytophthora infestans T30-4] Length = 1309 Score = 86.5 bits (213), Expect = 2e-15, Method: Composition-based stats. Identities = 33/193 (17%), Positives = 67/193 (34%), Gaps = 27/193 (13%) Query: 28 KTVKCLQL---ANGAVYYDEEKHWKEVH----DEKIKALEVIIEK--ANAAPIIVAYHFN 78 + +QL N + + + K + L+ ++ K A +++ Sbjct: 773 LSNVLMQLRKVCNHPYLFQTNGYQIDFDIVRSSGKFELLDRMLPKLKAAGHRVLMFSQMT 832 Query: 79 SDLARLQKAFPQGRTL----------DKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQ 126 + L+ F D+ + +N P + + G GLNL Sbjct: 833 QLMHVLEDYFNYRGFRYLRLDGSTSADEREQRMFMFNASDSPFFIFLLSTRAGGLGLNL- 891 Query: 127 YGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRT 186 + ++ F W+ Q R + G K V V+ L+ + ++E +L R Sbjct: 892 ATADTVIIFDSDWNPAMDAQA-----QDRAHRIGQKNEVRVFRLVTNSPVEEKILSRATD 946 Query: 187 KSTIQDLLLNALK 199 K + +L++ A K Sbjct: 947 KMNMNNLVVEAGK 959 >gi|242214113|ref|XP_002472881.1| predicted protein [Postia placenta Mad-698-R] gi|220728002|gb|EED81905.1| predicted protein [Postia placenta Mad-698-R] Length = 799 Score = 86.5 bits (213), Expect = 2e-15, Method: Composition-based stats. Identities = 34/157 (21%), Positives = 62/157 (39%), Gaps = 19/157 (12%) Query: 52 HDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTL----------DKDPC 99 K+ AL +++ + IV + S L L+ F + + Sbjct: 617 PSTKMLALVEHLQEWESTGDKTIVFSQWTSMLDLLETLFSRYGIRSLRYDGKMSREAREL 676 Query: 100 TIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQ 158 + ++ G ++ G GLNL N L+ L W+ Q +R+ + Sbjct: 677 VLSQFRKSGGPKVILISTKCGGVGLNL-VSANRLINMDLGWNYASESQAYDRV-----HR 730 Query: 159 AGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 G ++ VFV L+ +NTI+E +L+ TK + + L Sbjct: 731 LGQEKEVFVKRLVVRNTIEERMLKLQETKVGLAEAAL 767 >gi|158289757|ref|XP_311416.4| AGAP010699-PA [Anopheles gambiae str. PEST] gi|157018480|gb|EAA07021.4| AGAP010699-PA [Anopheles gambiae str. PEST] Length = 596 Score = 86.5 bits (213), Expect = 2e-15, Method: Composition-based stats. Identities = 27/158 (17%), Positives = 66/158 (41%), Gaps = 20/158 (12%) Query: 52 HDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARL---------QKAFPQGRT-LDKDPC 99 K+ L+ ++ + A + +++ F + L L + +G T + + Sbjct: 404 FSSKMIVLDKLLARLRARGSKVLIFSQFVTVLYLLMDYLDWREYEYCMLEGHTDIAERQE 463 Query: 100 TIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 + E+N + + G G+NL + ++F+ + ++ + Q +R Sbjct: 464 QMNEFNRPDSTKFVFLLSTRAGGLGINL-PAADTVIFYDMDFNPQMDFQAEDR-----AH 517 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 + G +R V V+ L+ + +IDEL+ K + + ++ Sbjct: 518 RIGQQRKVHVFRLLVRGSIDELLYLHSERKRQLDEAVI 555 >gi|52545633|emb|CAH56377.1| hypothetical protein [Homo sapiens] Length = 1061 Score = 86.5 bits (213), Expect = 2e-15, Method: Composition-based stats. Identities = 22/160 (13%), Positives = 54/160 (33%), Gaps = 20/160 (12%) Query: 45 EKHWKEVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQ----------KAFPQGR 92 + K+ L+ +++K +++ L L+ + G Sbjct: 390 DGSSLVKSSGKLMLLQKMLKKLRDEGHRLLIFSQMTKMLDLLEDFLEYEGYKYERIDGGI 449 Query: 93 TLDKDPCTIQEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 T I +N + + G G+NL + ++ + W+ Q Sbjct: 450 TGGLRQEAIDRFNAPGAQQFCFLLSTRAGGLGINL-ATADTVIIYDSDWNPHNDIQA--- 505 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 +R + G + V +Y + + +++E + Q + K + Sbjct: 506 --FSRAHRIGQNKKVMIYRFVTRASVEERITQVAKRKMML 543 >gi|149245518|ref|XP_001527236.1| SNF2-family ATP dependent chromatin remodeling factor snf21 [Lodderomyces elongisporus NRRL YB-4239] gi|146449630|gb|EDK43886.1| SNF2-family ATP dependent chromatin remodeling factor snf21 [Lodderomyces elongisporus NRRL YB-4239] Length = 1400 Score = 86.5 bits (213), Expect = 2e-15, Method: Composition-based stats. Identities = 32/162 (19%), Positives = 65/162 (40%), Gaps = 20/162 (12%) Query: 52 HDEKIKALEVIIEK--ANAAPIIVAYHFNSD---------LARLQKAFPQGRTL-DKDPC 99 K + L+ ++ K A+ +++ + L ++ G T D+ Sbjct: 909 TSGKFELLDRVLPKFKASGHRVLMFFQMTQIMDIMEDFLRLKDMKYMRLDGSTKADERQD 968 Query: 100 TIQEWNEGKIPLL--FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 ++E+N + G GLNLQ + ++ F W+ + Q R Sbjct: 969 MLKEFNAPDSDYFCFLLSTRAGGLGLNLQT-ADTVIIFDTDWNPHQDLQA-----QDRAH 1022 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 + G K V + LI+ ++++E++L+R K I ++ A K Sbjct: 1023 RIGQKNEVRILRLISNDSVEEMILERAHQKLEIDGKVIQAGK 1064 >gi|74181165|dbj|BAE27845.1| unnamed protein product [Mus musculus] Length = 1510 Score = 86.5 bits (213), Expect = 2e-15, Method: Composition-based stats. Identities = 31/160 (19%), Positives = 63/160 (39%), Gaps = 20/160 (12%) Query: 52 HDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAF---------PQGRTLDKDPCT 100 K + L+ I+ +A +++ S + ++ F G T +D Sbjct: 1059 ASGKFELLDRILPKLRATNHRVLLFCQMTSLMTIMEDYFAFRNFLYLRLDGTTKSEDRAA 1118 Query: 101 I-QEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 + +++NE + + + G GLNLQ + +V F W+ + Q R Sbjct: 1119 LLKKFNEPGSQYFIFLLSTRAGGLGLNLQ-AADTVVIFDSDWNPHQDLQA-----QDRAH 1172 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + G + V V L N+++E +L + K + ++ A Sbjct: 1173 RIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQA 1212 >gi|312076547|ref|XP_003140910.1| SNF2 family domain-containing protein [Loa loa] gi|307763929|gb|EFO23163.1| SNF2 family domain-containing protein [Loa loa] Length = 926 Score = 86.5 bits (213), Expect = 2e-15, Method: Composition-based stats. Identities = 33/207 (15%), Positives = 78/207 (37%), Gaps = 29/207 (14%) Query: 3 QYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANG--AVYYDEEKHWKEVHDEKIKALE 60 +Y K + + + ++ + + + C + + + +E + K K L+ Sbjct: 708 EYRKKKSDHVAE----DLAFLSDFAISQLCSKFTSTQKFILNEE----VALESGKFKELD 759 Query: 61 VIIEK--ANAAPIIVAYHFNSDLARL---------QKAFPQGRTLDKDPCT-IQEWNE-G 107 ++ +++ F S + L Q G T + I E+N Sbjct: 760 KLLPSIKEKGDKVLIFSQFTSVMDILEVYLKLRDHQYCRLDGSTPVMERQDVINEYNSSP 819 Query: 108 KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFV 167 + + + G G+NL +I++ + ++ +Q R + G + VFV Sbjct: 820 DLFVFLLSTKAGGLGINLTAANHIILH-DIDFNPYNDKQAEGRC-----HRMGQTKDVFV 873 Query: 168 YYLIAQNTIDELVLQRLRTKSTIQDLL 194 LI+ +T++E +L + K ++ + Sbjct: 874 VRLISADTVEEEMLALAQKKLELEKEV 900 >gi|241953595|ref|XP_002419519.1| ISWI chromatin-remodeling complex ATPase, putative [Candida dubliniensis CD36] gi|223642859|emb|CAX43114.1| ISWI chromatin-remodeling complex ATPase, putative [Candida dubliniensis CD36] Length = 1054 Score = 86.5 bits (213), Expect = 2e-15, Method: Composition-based stats. Identities = 42/224 (18%), Positives = 82/224 (36%), Gaps = 39/224 (17%) Query: 6 KFQRELYCDLQGENIEAFNSAS--------KTVKCLQL---ANGAVYYD--------EEK 46 Q E Y L ++I+A N +QL N +D Sbjct: 384 DMQVEWYKRLLEKDIDAVNGVVGKREGKTRLLNIVMQLRKCCNHPYLFDGAEPGPPYTTD 443 Query: 47 HWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQ---------KAFPQGRTLD 95 + K+ L+ +++K A + +++ + L L+ G T Sbjct: 444 EHLVYNSGKMIILDKMLKKFKAEGSRVLIFSQMSRVLDILEDYCYFREYEYCRIDGSTSH 503 Query: 96 KDP-CTIQEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIG 152 +D I E+N + + G G+NL +I++ + W+ + Q ++R Sbjct: 504 EDRIEAIDEYNAPNSDKFIFLLTTRAGGLGINLT-SADIVILYDSDWNPQADLQAMDR-- 560 Query: 153 VTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + G K+ V V+ + + I+E VL+R K + L++ Sbjct: 561 ---AHRIGQKKQVKVFRFVTEKAIEEKVLERAAQKLRLDQLVIQ 601 >gi|207347991|gb|EDZ73985.1| YAL019Wp-like protein [Saccharomyces cerevisiae AWRI1631] Length = 516 Score = 86.5 bits (213), Expect = 2e-15, Method: Composition-based stats. Identities = 31/177 (17%), Positives = 65/177 (36%), Gaps = 22/177 (12%) Query: 41 YYDEEKHWKEVHDEKIKALEVIIEK---ANAAPIIVAYHFNSDLARLQK----------A 87 Y W + KI AL+ +++ +++ F L L+ Sbjct: 323 YQLHNDEWMQ--SGKIDALKKLLKTIIVDKQEKVLIFSLFTQVLDILEMVLSTLDYKFLR 380 Query: 88 FPQGRTLDKDPCTIQEWNEGK-IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 ++ I ++ E K IP+ + G G+NL N+++F + Sbjct: 381 LDGSTQVNDRQLLIDKFYEDKDIPIFILSTKAGGFGINLVCANNVIIFD------QSFNP 434 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETI 203 +R R + G + V + LI +++I+E + Q + K + + K + + Sbjct: 435 HDDRQAADRAHRVGQTKEVNITTLITKDSIEEKIHQLAKNKLALDSYISEDKKSQDV 491 >gi|146417920|ref|XP_001484927.1| hypothetical protein PGUG_02656 [Meyerozyma guilliermondii ATCC 6260] Length = 1224 Score = 86.5 bits (213), Expect = 2e-15, Method: Composition-based stats. Identities = 39/225 (17%), Positives = 78/225 (34%), Gaps = 34/225 (15%) Query: 3 QYHKFQRELYCDLQGENIEAFNSAS-KTVKCLQL---ANGAVYYDE----------EKHW 48 Y + + + E A + K +QL N ++E + Sbjct: 721 LYQQMLKHNALFVGAEVGSAKSGIKGLNNKIMQLRKICNHPFVFEEVEDVLNPSRMTNNL 780 Query: 49 KEVHDEKIKALEVIIEK--ANAAPIIVAYHFNS------DLARLQK----AFPQGRTLDK 96 K + L+ ++ K A+ +++ + S D RL+ + Sbjct: 781 IWRSSGKFELLDRVLPKFKASGHRVLLFFQMTSVMDIMEDFLRLRNMKYLRLDGATKAED 840 Query: 97 DPCTIQEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 ++ +N + + G GLNLQ + ++ F W+ + Q Sbjct: 841 RQEMLKLFNAPGSEYFCFLLSTRAGGLGLNLQ-SADTVIIFDTDWNPHQDLQA-----QD 894 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 R + G K V + LI +++E++L+R K I ++ A K Sbjct: 895 RAHRIGQKNEVRILRLITNESVEEVILERAHQKLDIDGKVIQAGK 939 >gi|302803051|ref|XP_002983279.1| hypothetical protein SELMODRAFT_422676 [Selaginella moellendorffii] gi|300148964|gb|EFJ15621.1| hypothetical protein SELMODRAFT_422676 [Selaginella moellendorffii] Length = 3497 Score = 86.5 bits (213), Expect = 2e-15, Method: Composition-based stats. Identities = 33/157 (21%), Positives = 57/157 (36%), Gaps = 20/157 (12%) Query: 55 KIKALEVIIEKANA--APIIVAYHFNSDLARL---------QKAFPQGRTLDKDPCT-IQ 102 K++ L+ I+ K +++ L L + G T+ + + I Sbjct: 1471 KLEMLDRILPKLKKSNHRVLLFSTMTRLLNVLEDYLTWKGYKYLRLDGHTMGSERGSLID 1530 Query: 103 EWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 +N L + G G+NLQ + ++ F W+ + Q R + G Sbjct: 1531 RFNAPDSDAFLFLLSIRAGGIGVNLQ-AADTVIIFDTDWNPQVDLQAQAR-----AHRIG 1584 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 KR V V L NTI+E V K + + + A Sbjct: 1585 QKRDVLVLRLETVNTIEEQVRASAEHKLGVANQSITA 1621 >gi|300121395|emb|CBK21775.2| unnamed protein product [Blastocystis hominis] Length = 735 Score = 86.5 bits (213), Expect = 2e-15, Method: Composition-based stats. Identities = 31/183 (16%), Positives = 64/183 (34%), Gaps = 42/183 (22%) Query: 49 KEVHDEKIKALEVIIEKANAAPIIVAYHF-----NSDLARLQKAFPQGRTLDKDPCT--- 100 + + ++ L I + F + R+ + F +G + + Sbjct: 534 ILIFSQWVEMLNDIGIALKREG-MRFVQFDGSLSKQERERILEEFERGNAVFEQEMDDSE 592 Query: 101 -----IQEWN---------------------EGKIP-LLFAHPASCGHGLNLQYGGNILV 133 ++W +G+ P ++ + G GLNL N + Sbjct: 593 LMQEISEDWESTRKRGASTPIAAKKRQKVETDGEFPRIMLISLRAGGVGLNLT-SANTVF 651 Query: 134 FFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDL 193 WW+ Q I R+ + G KR V V+ LI +++I+E +++ + K + Sbjct: 652 MCDPWWNEAVENQAINRVF-----RIGQKRKVKVFRLIIEDSIEEKIIKLQQKKEQLIQS 706 Query: 194 LLN 196 L+ Sbjct: 707 TLD 709 >gi|328724512|ref|XP_001948282.2| PREDICTED: hypothetical protein LOC100164870 [Acyrthosiphon pisum] Length = 4192 Score = 86.5 bits (213), Expect = 2e-15, Method: Composition-based stats. Identities = 23/158 (14%), Positives = 55/158 (34%), Gaps = 23/158 (14%) Query: 53 DEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAF---------PQGRTL-DKDPCTIQ 102 D+ + L+ N +++ L ++ GR + I Sbjct: 1939 DKLLPKLKD-----NGHRVLIFSQMVRCLDIIEDYLVYRKYPFERLDGRIRGNLRQAAID 1993 Query: 103 EWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 + + + + G G+NL + ++ + W+ + Q R + G Sbjct: 1994 RFCKPDSDRFVFLLCTKAGGLGINLT-AADTVIIYDSDWNPQNDLQAQARC-----HRIG 2047 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNAL 198 ++ V VY L+ +NT + + + K + +L ++ Sbjct: 2048 QQKMVKVYRLLCRNTYEREMFNKASLKLGLDKAILQSM 2085 >gi|320163536|gb|EFW40435.1| predicted protein [Capsaspora owczarzaki ATCC 30864] Length = 1077 Score = 86.5 bits (213), Expect = 2e-15, Method: Composition-based stats. Identities = 26/137 (18%), Positives = 50/137 (36%), Gaps = 12/137 (8%) Query: 68 AAPIIVAY-HFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQ 126 I Y ++ +DLAR Q+A I ++ + G GLNL Sbjct: 929 EKSIKAFYGNWTADLARQQQANANSTDKKSKHPLIT-----GSRVMLLSLLAGGVGLNLV 983 Query: 127 YGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRT 186 ++++ W+ Q +R + G V V+ LI + T++E V Sbjct: 984 AANHVVIADGH-WNPALEDQACDR-----AYRVGQPLKVTVHRLICKGTVEERVAALQAK 1037 Query: 187 KSTIQDLLLNALKKETI 203 K + ++ + + + Sbjct: 1038 KRALSKDIIQSARAGAV 1054 >gi|255719802|ref|XP_002556181.1| KLTH0H06952p [Lachancea thermotolerans] gi|238942147|emb|CAR30319.1| KLTH0H06952p [Lachancea thermotolerans] Length = 1359 Score = 86.5 bits (213), Expect = 2e-15, Method: Composition-based stats. Identities = 26/161 (16%), Positives = 59/161 (36%), Gaps = 22/161 (13%) Query: 52 HDEKIKALEVII----EKANAAPIIVAYHFNSDLARLQK-----------AFPQGRTLDK 96 +KIK I+ + II+ F + LQ + Sbjct: 1181 PSQKIKQCLDIVRNVFANSRDEKIIIFSQFTTFFDLLQHFIRKELGVQYLRYDGSMDAQS 1240 Query: 97 DPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTR 155 TI+ + + LL + GL L N ++ +W+ +Q ++R Sbjct: 1241 RAATIEGFYRNNERRLLLISMKAGNAGLTLTC-ANHVILVDPFWNPFVEEQAMDRC---- 1295 Query: 156 QRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + R V V+ L+ ++++++ +L+ + K + + ++ Sbjct: 1296 -YRISQTREVQVHRLLIKDSVEDRILELQKKKRELVESAMD 1335 >gi|212530546|ref|XP_002145430.1| RSC complex subunit (Sth1), putative [Penicillium marneffei ATCC 18224] gi|210074828|gb|EEA28915.1| RSC complex subunit (Sth1), putative [Penicillium marneffei ATCC 18224] Length = 1430 Score = 86.5 bits (213), Expect = 2e-15, Method: Composition-based stats. Identities = 30/147 (20%), Positives = 55/147 (37%), Gaps = 18/147 (12%) Query: 65 KANAAPIIVAYH------FNSDLAR---LQKAFPQGRTL-DKDPCTIQEWNEG--KIPLL 112 KA +++ + D R L+ G T D ++ +N Sbjct: 884 KATGHRVLLFFQMTQIMNIMEDFLRFRGLKYLRLDGSTKSDDRSELLKLFNAPNSDYFCF 943 Query: 113 FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIA 172 + G GLNLQ + ++ + W+ + Q R + G K V + LI Sbjct: 944 LLSTRAGGLGLNLQT-ADTVIIYDSDWNPHQDLQA-----QDRAHRIGQKNEVRILRLIT 997 Query: 173 QNTIDELVLQRLRTKSTIQDLLLNALK 199 N+++E +L R + K + ++ A K Sbjct: 998 SNSVEEKILGRAQFKLDMDGKVIQAGK 1024 >gi|149604225|ref|XP_001512827.1| PREDICTED: similar to chromatin remodeling factor CHROM1 isoform 1 [Ornithorhynchus anatinus] Length = 2885 Score = 86.5 bits (213), Expect = 2e-15, Method: Composition-based stats. Identities = 26/146 (17%), Positives = 51/146 (34%), Gaps = 18/146 (12%) Query: 65 KANAAPIIVAYHFNSDLARLQKAFPQGRTL----------DKDPCTIQEWNEGKIP--LL 112 KA +++ L L+ R L + I +++ + Sbjct: 1195 KAGGHKVLIFSQMVRCLDILEDYLIHKRYLYERIDGRVRGNLRQAAIDRFSKPDSDRFVF 1254 Query: 113 FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIA 172 + G G+NL + + F W+ + Q R + G +AV VY LI Sbjct: 1255 LLCTRAGGLGINLT-AADTCIIFDSDWNPQNDLQAQARC-----HRIGQNKAVKVYRLIT 1308 Query: 173 QNTIDELVLQRLRTKSTIQDLLLNAL 198 +N+ + + R K + +L ++ Sbjct: 1309 RNSYEREMFDRASLKLGLDKAVLQSM 1334 >gi|325190696|emb|CCA25192.1| unnamed protein product putative [Albugo laibachii Nc14] Length = 835 Score = 86.5 bits (213), Expect = 2e-15, Method: Composition-based stats. Identities = 22/106 (20%), Positives = 48/106 (45%), Gaps = 8/106 (7%) Query: 96 KDPCTIQEWNEGK--IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGV 153 + I+ + + +L + G+NL + N LV F + W+ Q + Sbjct: 667 RRSEYIERFTSSDNRVKVLLVSTRAGAEGINL-HAANRLVLFDVSWNPSYDHQSM----- 720 Query: 154 TRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 R + G + V VY L++ T++ ++ ++ R K+++ L++ K Sbjct: 721 CRSHRLGQSKTVHVYRLVSTGTMERMIYEQQRKKTSLSMALVDRSK 766 >gi|242010572|ref|XP_002426039.1| DNA repair and recombination protein RAD26, putative [Pediculus humanus corporis] gi|212510049|gb|EEB13301.1| DNA repair and recombination protein RAD26, putative [Pediculus humanus corporis] Length = 1206 Score = 86.5 bits (213), Expect = 2e-15, Method: Composition-based stats. Identities = 30/154 (19%), Positives = 58/154 (37%), Gaps = 19/154 (12%) Query: 55 KIKALEVIIE--KANAAPIIVAYHFNSDLARLQK----------AFPQGRTLDKDPCTIQ 102 K+ +E +++ K +++ L+ L+ + I Sbjct: 674 KMIVMETLLKIWKKQGHRVLIFTQSRKMLSILENFVLSQNYEYLKLDGTTNIGSRQPLIN 733 Query: 103 EWNE-GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGF 161 ++NE K + + G G+NL G N +V + W+ Q ER + G Sbjct: 734 KFNEEKKYYIFLSTTHVGGLGVNLT-GANRVVIYDPDWNPATDMQARERAW-----RIGQ 787 Query: 162 KRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 + V +Y L+ TI+E + R K + + +L Sbjct: 788 ENQVTIYRLVTSGTIEEKIYHRQIFKQFLTNKVL 821 >gi|110755099|ref|XP_396302.3| PREDICTED: SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1-like [Apis mellifera] Length = 830 Score = 86.5 bits (213), Expect = 2e-15, Method: Composition-based stats. Identities = 26/153 (16%), Positives = 62/153 (40%), Gaps = 19/153 (12%) Query: 55 KIKALEVIIEKA--NAAPIIVAYHFNSDLARLQKAF---------PQGRTLDKDPCTIQE 103 K+K L+ ++ K +++ F L L++ G T D + Sbjct: 629 KLKILDELLPKLKEEGHRVLIFSQFTMILDILEEYLTIRGQTYLRLDGSTPVTDRQCLIN 688 Query: 104 W--NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGF 161 + I + + G G+NL +++ + ++ +Q +R + G Sbjct: 689 QYMEDENIFIFLLSTKAGGLGINLTAADTVIIH-DIDFNPYNDKQAEDRC-----HRVGQ 742 Query: 162 KRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 KR+V + L++++TI+E + + + K ++ + Sbjct: 743 KRSVSIIRLLSEDTIEEGMYEIAQDKLHLEQQI 775 >gi|157107190|ref|XP_001649665.1| chromodomain helicase DNA binding protein [Aedes aegypti] gi|108879646|gb|EAT43871.1| chromodomain helicase DNA binding protein [Aedes aegypti] Length = 2002 Score = 86.5 bits (213), Expect = 2e-15, Method: Composition-based stats. Identities = 25/160 (15%), Positives = 59/160 (36%), Gaps = 20/160 (12%) Query: 53 DEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQKAFPQ---------GRTLDK-DPCT 100 K+ L+ ++ + +++ L L + + G + Sbjct: 883 SGKLVLLDKLLCRLKETGHRVLIFSQMVRMLDILAEYLQKRHFSFQRLDGSIKGELRKQA 942 Query: 101 IQEWN-EGKIPL-LFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQ 158 + +N EG + G G+NL + ++ F W+ + Q R + Sbjct: 943 LDHFNAEGSTDFCFLLSTRAGGLGINL-ATADTVIIFDSDWNPQNDLQAQAR-----AHR 996 Query: 159 AGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNAL 198 G K V +Y L+ +++E +++R + K + L++ + Sbjct: 997 IGQKNQVNIYRLVTARSVEEDIVERAKKKMVLDHLVIQRM 1036 >gi|327352533|gb|EGE81390.1| DNA repair protein RAD16 [Ajellomyces dermatitidis ATCC 18188] Length = 983 Score = 86.5 bits (213), Expect = 2e-15, Method: Composition-based stats. Identities = 29/168 (17%), Positives = 60/168 (35%), Gaps = 21/168 (12%) Query: 51 VHDEKIKALE-VIIE---KANAAPIIVAYHFNSDLA----RLQKAFPQGRTLD------K 96 KI+ L + + K IV F S L RL++ LD + Sbjct: 807 TSSTKIEMLVYDLFKLRSKKQTHKSIVFSQFTSMLQLVEWRLRRVGFNTVMLDGSMTPAQ 866 Query: 97 DPCTIQEW-NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTR 155 +I+ + N + + + G LNL + + WW+ Q +R Sbjct: 867 RQKSIEHFMNNVDVEVFLVSLKAGGVALNLTEASRVFI-VDPWWNPAAEWQSADRC---- 921 Query: 156 QRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETI 203 + G +R + L +++++ ++ K+ + +N + E + Sbjct: 922 -HRIGQRRPCVITRLCIEDSVESRMVLLQEKKANMIRGTINKDQSEAL 968 >gi|254584336|ref|XP_002497736.1| ZYRO0F12320p [Zygosaccharomyces rouxii] gi|238940629|emb|CAR28803.1| ZYRO0F12320p [Zygosaccharomyces rouxii] Length = 983 Score = 86.5 bits (213), Expect = 2e-15, Method: Composition-based stats. Identities = 41/226 (18%), Positives = 83/226 (36%), Gaps = 43/226 (19%) Query: 6 KFQRELYCDLQGENIEAFNSAS--------KTVKCLQLAN-------------GAVYYDE 44 + Q Y L ++I+A N +QL G Y + Sbjct: 305 EMQVHWYKSLLEKDIDAVNGVVGKREGKTRLLNIVMQLRKCCNHPYLFEGAEPGPPYTTD 364 Query: 45 EKHWKEVHDEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQ---------KAFPQGRT 93 E + K+ L+ +++K + +++ + L L+ G T Sbjct: 365 EHLV--YNAGKMIVLDKLLKKMKEKGSRVLIFSQMSRLLDILEDYCYFRDYEYCRIDGST 422 Query: 94 LDKDP-CTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 +D I E+N+ + + G G+NL + +V + W+ + Q ++R Sbjct: 423 AHEDRIEAIDEFNKPDSDKFVFLLTTRAGGLGINL-VTADTVVLYDSDWNPQADLQAMDR 481 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + G K+ V VY + ++ I+E V++R K + L++ Sbjct: 482 -----AHRIGQKKQVHVYRFVTESAIEEKVIERAAQKLRLDQLVIQ 522 >gi|226289343|gb|EEH44855.1| DNA repair protein RAD16 [Paracoccidioides brasiliensis Pb18] Length = 899 Score = 86.5 bits (213), Expect = 2e-15, Method: Composition-based stats. Identities = 29/168 (17%), Positives = 60/168 (35%), Gaps = 21/168 (12%) Query: 51 VHDEKIKALE-VIIE---KANAAPIIVAYHFNSDLA----RLQKAFPQGRTLD------K 96 KI+ L + + K IV F S L RL++ LD + Sbjct: 723 TSSTKIEMLVYDLFKLRSKKQTHKSIVFSQFTSMLQLVEWRLRRVGFNTVMLDGSMTPAQ 782 Query: 97 DPCTIQEW-NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTR 155 +I+ + N + + + G LNL + + WW+ Q +R Sbjct: 783 RQKSIEHFMNNVDVEVFLVSLKAGGVALNLTEASRVFI-VDPWWNPAAEWQSADRC---- 837 Query: 156 QRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETI 203 + G +R + L +++++ ++ K+ + +N + E + Sbjct: 838 -HRIGQRRPCVITRLCIEDSVESRMVLLQEKKANMIRGTINKDQSEAL 884 >gi|295661927|ref|XP_002791518.1| DNA repair protein RAD16 [Paracoccidioides brasiliensis Pb01] gi|226280075|gb|EEH35641.1| DNA repair protein RAD16 [Paracoccidioides brasiliensis Pb01] Length = 910 Score = 86.5 bits (213), Expect = 2e-15, Method: Composition-based stats. Identities = 29/168 (17%), Positives = 60/168 (35%), Gaps = 21/168 (12%) Query: 51 VHDEKIKALE-VIIE---KANAAPIIVAYHFNSDLA----RLQKAFPQGRTLD------K 96 KI+ L + + K IV F S L RL++ LD + Sbjct: 734 TSSTKIEMLVYDLFKLRSKKQTHKSIVFSQFTSMLQLVEWRLRRVGFNTVMLDGSMTPAQ 793 Query: 97 DPCTIQEW-NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTR 155 +I+ + N + + + G LNL + + WW+ Q +R Sbjct: 794 RQKSIEHFMNNVDVEVFLVSLKAGGVALNLTEASRVFI-VDPWWNPAAEWQSADRC---- 848 Query: 156 QRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETI 203 + G +R + L +++++ ++ K+ + +N + E + Sbjct: 849 -HRIGQRRPCVITRLCIEDSVESRMVLLQEKKANMIRGTINKDQSEAL 895 >gi|225682156|gb|EEH20440.1| RING-11 protein [Paracoccidioides brasiliensis Pb03] Length = 841 Score = 86.5 bits (213), Expect = 2e-15, Method: Composition-based stats. Identities = 29/168 (17%), Positives = 60/168 (35%), Gaps = 21/168 (12%) Query: 51 VHDEKIKALE-VIIE---KANAAPIIVAYHFNSDLA----RLQKAFPQGRTLD------K 96 KI+ L + + K IV F S L RL++ LD + Sbjct: 665 TSSTKIEMLVYDLFKLRSKKQTHKSIVFSQFTSMLQLVEWRLRRVGFNTVMLDGSMTPAQ 724 Query: 97 DPCTIQEW-NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTR 155 +I+ + N + + + G LNL + + WW+ Q +R Sbjct: 725 RQKSIEHFMNNVDVEVFLVSLKAGGVALNLTEASRVFI-VDPWWNPAAEWQSADRC---- 779 Query: 156 QRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETI 203 + G +R + L +++++ ++ K+ + +N + E + Sbjct: 780 -HRIGQRRPCVITRLCIEDSVESRMVLLQEKKANMIRGTINKDQSEAL 826 >gi|114553052|ref|XP_525165.2| PREDICTED: chromodomain helicase DNA binding protein 5 [Pan troglodytes] Length = 1991 Score = 86.5 bits (213), Expect = 2e-15, Method: Composition-based stats. Identities = 21/160 (13%), Positives = 54/160 (33%), Gaps = 20/160 (12%) Query: 45 EKHWKEVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLAR----LQKAFPQGRTLDK-- 96 + K+ L+ +++K +++ L L+ + +D Sbjct: 1015 DGSSLVKSSGKLMLLQKMLKKLRDEGHRVLIFSQMTKMLDLGEDFLEYEGYKYERIDGGI 1074 Query: 97 ----DPCTIQEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 I +N + + G G+NL + ++ + W+ Q Sbjct: 1075 TGGLRQEAIDRFNAPGAQQFCFLLSTRAGGLGINL-ATADTVIIYDSDWNPHNDIQA--- 1130 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 +R + G + V +Y + + +++E + Q + K + Sbjct: 1131 --FSRAHRIGQNKKVMIYRFVTRASVEERITQVAKRKMML 1168 >gi|328705649|ref|XP_001947067.2| PREDICTED: hypothetical protein LOC100164965 [Acyrthosiphon pisum] Length = 2250 Score = 86.5 bits (213), Expect = 2e-15, Method: Composition-based stats. Identities = 28/169 (16%), Positives = 61/169 (36%), Gaps = 30/169 (17%) Query: 52 HDEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQKAFPQGRTLDKDP----------- 98 K+ L I+E++ +++ L +++ + + KD Sbjct: 1695 ASAKMSLLFAIVEESVRIGDRVLLFSQSLFTLDLIEEFLQRNKIPGKDEHWCRNCDYYRL 1754 Query: 99 ----------CTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQM 147 I ++N + L + G+NL G N ++ F W+ Q Sbjct: 1755 DGSTSASEREKLINDFNICNTVHLFLVSTRAGSLGINL-VGANRVIVFDASWNPCHDTQA 1813 Query: 148 IERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + R + G ++ FVY L+ N +++ + R K + D +++ Sbjct: 1814 V-----CRVYRYGQQKPCFVYRLVTDNCLEKKIYDRQINKQVMADRVVD 1857 >gi|167517477|ref|XP_001743079.1| hypothetical protein [Monosiga brevicollis MX1] gi|163778178|gb|EDQ91793.1| predicted protein [Monosiga brevicollis MX1] Length = 751 Score = 86.5 bits (213), Expect = 2e-15, Method: Composition-based stats. Identities = 36/221 (16%), Positives = 81/221 (36%), Gaps = 30/221 (13%) Query: 2 KQYHKFQRELYCDLQG-ENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHD------- 53 + Y Y +L+ + ++ N + ++ + N D+ + D Sbjct: 408 QYYKTILTRNYTELRDIKKSKSSNLLNIVMELKKCCNHTNLIDDGLDNQGGPDPLTRLLR 467 Query: 54 --EKIKALEVIIEKAN--AAPIIVAYHFNSDLARL---------QKAFPQGRTLDKDPC- 99 K+ L+ ++ + +++ L L Q G T + Sbjct: 468 GSGKLILLDKLLTRLKESGHRVLIFSQMVVMLDVLAYYLALRQYQYQRLDGNTKHEQRKR 527 Query: 100 TIQEWN-EGKIPL-LFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 I +N EG + G G+NL + ++ + W+ + Q R Sbjct: 528 AINHFNAEGSTDFAFLLSTRAGGLGVNL-ATADTVIIYDSDWNPQNDLQAQAR-----AH 581 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNAL 198 + G + V +Y L++++T++E +LQR + K + L++ + Sbjct: 582 RIGQTKQVNIYRLVSKSTVEEDILQRAKQKMVLDHLVIQRM 622 >gi|149604227|ref|XP_001512847.1| PREDICTED: similar to chromatin remodeling factor CHROM1 isoform 2 [Ornithorhynchus anatinus] Length = 2876 Score = 86.5 bits (213), Expect = 2e-15, Method: Composition-based stats. Identities = 26/146 (17%), Positives = 51/146 (34%), Gaps = 18/146 (12%) Query: 65 KANAAPIIVAYHFNSDLARLQKAFPQGRTL----------DKDPCTIQEWNEGKIP--LL 112 KA +++ L L+ R L + I +++ + Sbjct: 1195 KAGGHKVLIFSQMVRCLDILEDYLIHKRYLYERIDGRVRGNLRQAAIDRFSKPDSDRFVF 1254 Query: 113 FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIA 172 + G G+NL + + F W+ + Q R + G +AV VY LI Sbjct: 1255 LLCTRAGGLGINLT-AADTCIIFDSDWNPQNDLQAQARC-----HRIGQNKAVKVYRLIT 1308 Query: 173 QNTIDELVLQRLRTKSTIQDLLLNAL 198 +N+ + + R K + +L ++ Sbjct: 1309 RNSYEREMFDRASLKLGLDKAVLQSM 1334 >gi|47215569|emb|CAG10740.1| unnamed protein product [Tetraodon nigroviridis] Length = 3070 Score = 86.5 bits (213), Expect = 2e-15, Method: Composition-based stats. Identities = 26/149 (17%), Positives = 52/149 (34%), Gaps = 18/149 (12%) Query: 66 ANAAPIIVAYHFNSDLARLQKAFPQ---------GRTL-DKDPCTIQEWNEGKIP--LLF 113 A ++V L L+ Q GR ++ I + + + Sbjct: 612 AGGHKVLVFSQMVRCLDILEDYLIQRRYSYERIDGRVRGNQRQAAIDRFCKPDSDRFVFL 671 Query: 114 AHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQ 173 + G G+NL + + F W+ + Q R + G +AV VY LI + Sbjct: 672 LCTRAGGLGINLT-AADTCIIFDSDWNPQNDLQAQARC-----HRIGQSKAVKVYRLITR 725 Query: 174 NTIDELVLQRLRTKSTIQDLLLNALKKET 202 N+ + + + K + +L + ++ Sbjct: 726 NSYEREMFDKASLKLGLDKAVLQDINRKG 754 >gi|311245835|ref|XP_001925950.2| PREDICTED: probable global transcription activator SNF2L2 [Sus scrofa] Length = 1515 Score = 86.1 bits (212), Expect = 2e-15, Method: Composition-based stats. Identities = 31/160 (19%), Positives = 63/160 (39%), Gaps = 20/160 (12%) Query: 52 HDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAF---------PQGRTLDKDPCT 100 K + L+ I+ +A +++ S + ++ F G T +D Sbjct: 973 ASGKFELLDRILPKLRATNHRVLLFCQMTSLMTIMEDYFAFRNFLYLRLDGTTKSEDRAA 1032 Query: 101 I-QEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 + +++NE + + + G GLNLQ + +V F W+ + Q R Sbjct: 1033 LLKKFNEPGSQYFIFLLSTRAGGLGLNLQ-AADTVVIFDSDWNPHQDLQA-----QDRAH 1086 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + G + V V L N+++E +L + K + ++ A Sbjct: 1087 RIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQA 1126 >gi|158290917|ref|XP_312449.4| AGAP002490-PA [Anopheles gambiae str. PEST] gi|157018127|gb|EAA08205.4| AGAP002490-PA [Anopheles gambiae str. PEST] Length = 881 Score = 86.1 bits (212), Expect = 2e-15, Method: Composition-based stats. Identities = 32/184 (17%), Positives = 64/184 (34%), Gaps = 45/184 (24%) Query: 52 HDEKIKALEVIIEK--ANAAPIIVAYH-------FNSDLARLQKAFPQGR---------- 92 H K+ L I+++ A ++V L+ L + + Sbjct: 416 HSGKLVVLMEILKECEAIGDKLLVFSQSLYSLDVIEHFLSLLDENLQKDEDERDEQLSKY 475 Query: 93 -----------------TLDKDPCTIQEWNEG---KIPLLFAHPASCGHGLNLQYGGNIL 132 ++D + +N+ + L + G G+NL N + Sbjct: 476 PGSWSLGLDYFRLDGSTSIDNRNDACKVFNDESNTRARLFLISTRAGGLGINL-VAANRV 534 Query: 133 VFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQD 192 V F + W+ Q I R+ + G + ++Y IA T++E + +R TK I Sbjct: 535 VIFDVSWNPSHDIQSIFRV-----YRFGQSKPCYIYRFIAMGTMEEKIYERQVTKQAISK 589 Query: 193 LLLN 196 +++ Sbjct: 590 RVID 593 >gi|193848582|gb|ACF22767.1| SNF2P [Brachypodium distachyon] Length = 721 Score = 86.1 bits (212), Expect = 2e-15, Method: Composition-based stats. Identities = 31/175 (17%), Positives = 69/175 (39%), Gaps = 32/175 (18%) Query: 42 YDEEKHWKEVHDEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQ----------KAFP 89 Y+E +H + K+ L++I++K + +++ L LQ + Sbjct: 232 YEEGEHLVQ-ASGKLIVLDLILKKLHRLGHRVLLFAQMTHTLDILQDFLELRNYTYERLD 290 Query: 90 QGRTLDKDPCTIQEW-------------NEGKIPLLFAHPASCGHGLNLQYGGNILVFFS 136 ++ I+++ N + + G GLNL G + ++F+ Sbjct: 291 GSVRAEERFAAIRKFSSQPTKGVARDDDNPSGAFVFMISTRAGGVGLNL-IGADTVIFYE 349 Query: 137 LWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQ 191 W+ + +Q ++R + G V L++Q TI+E++++R K + Sbjct: 350 QDWNPQADKQALQR-----AHRIGQLNHVLSINLVSQRTIEEVIMRRAERKLKLS 399 >gi|149245558|ref|XP_001527256.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL YB-4239] gi|146449650|gb|EDK43906.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL YB-4239] Length = 936 Score = 86.1 bits (212), Expect = 2e-15, Method: Composition-based stats. Identities = 21/144 (14%), Positives = 58/144 (40%), Gaps = 18/144 (12%) Query: 65 KANAAPIIVAYHFNSDLARLQK----------AFPQGRTLDKDPCTIQEWNEGK--IPLL 112 + ++ F + +Q ++ I ++N+ + Sbjct: 677 SSQNHKCLIFSQFTKVMDLIQDWLHFQNIKACRLDGLTPQEERAKQISQFNDSNSSYKVF 736 Query: 113 FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIA 172 + G G+NL G + ++ F W+ + Q I+R+ + G + V +Y + Sbjct: 737 LLSTRAGGLGINLT-GADTVILFDNDWNPQMDLQAIDRV-----HRIGQTKPVKIYRFVV 790 Query: 173 QNTIDELVLQRLRTKSTIQDLLLN 196 +++I+E+++ + +K ++ L++ Sbjct: 791 RDSIEEILIAKSSSKRFLEKLVIQ 814 >gi|157107192|ref|XP_001649666.1| chromodomain helicase DNA binding protein [Aedes aegypti] gi|108879647|gb|EAT43872.1| chromodomain helicase DNA binding protein [Aedes aegypti] Length = 2001 Score = 86.1 bits (212), Expect = 2e-15, Method: Composition-based stats. Identities = 25/160 (15%), Positives = 59/160 (36%), Gaps = 20/160 (12%) Query: 53 DEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQKAFPQ---------GRTLDK-DPCT 100 K+ L+ ++ + +++ L L + + G + Sbjct: 883 SGKLVLLDKLLCRLKETGHRVLIFSQMVRMLDILAEYLQKRHFSFQRLDGSIKGELRKQA 942 Query: 101 IQEWN-EGKIPL-LFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQ 158 + +N EG + G G+NL + ++ F W+ + Q R + Sbjct: 943 LDHFNAEGSTDFCFLLSTRAGGLGINL-ATADTVIIFDSDWNPQNDLQAQAR-----AHR 996 Query: 159 AGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNAL 198 G K V +Y L+ +++E +++R + K + L++ + Sbjct: 997 IGQKNQVNIYRLVTARSVEEDIVERAKKKMVLDHLVIQRM 1036 >gi|301122081|ref|XP_002908767.1| chromodomain-helicase-DNA-binding protein, putative [Phytophthora infestans T30-4] gi|262099529|gb|EEY57581.1| chromodomain-helicase-DNA-binding protein, putative [Phytophthora infestans T30-4] Length = 1788 Score = 86.1 bits (212), Expect = 2e-15, Method: Composition-based stats. Identities = 23/147 (15%), Positives = 50/147 (34%), Gaps = 18/147 (12%) Query: 67 NAAPIIVAYHFNSDLARLQKAF---------PQGRTLDKDPCT-IQEW--NEGKIPLLFA 114 +++ L ++ G D + + E K ++ Sbjct: 777 GGHKVLIFSQMVRVLDIIEDYLRYCGYLYERLDGNIRGNDRQAAVDRFVKPEYKRFVMLL 836 Query: 115 HPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQN 174 + G GLNL + ++ F W+ + Q R + G +V +Y LI + Sbjct: 837 STKAGGLGLNLT-AADTVIIFDSDWNPQNDLQAQAR-----AHRIGQTHSVKIYRLITRK 890 Query: 175 TIDELVLQRLRTKSTIQDLLLNALKKE 201 T + + + K + +L +++E Sbjct: 891 TYEMHMFHKASLKLGLDKAVLTHMRRE 917 >gi|302755712|ref|XP_002961280.1| hypothetical protein SELMODRAFT_403041 [Selaginella moellendorffii] gi|300172219|gb|EFJ38819.1| hypothetical protein SELMODRAFT_403041 [Selaginella moellendorffii] Length = 3598 Score = 86.1 bits (212), Expect = 2e-15, Method: Composition-based stats. Identities = 33/157 (21%), Positives = 57/157 (36%), Gaps = 20/157 (12%) Query: 55 KIKALEVIIEKANA--APIIVAYHFNSDLARL---------QKAFPQGRTLDKDPCT-IQ 102 K++ L+ I+ K +++ L L + G T+ + + I Sbjct: 1455 KLEMLDRILPKLKKSNHRVLLFSTMTRLLNVLEDYLTWKGYKYLRLDGHTMGSERGSLID 1514 Query: 103 EWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 +N L + G G+NLQ + ++ F W+ + Q R + G Sbjct: 1515 RFNAPDSDAFLFLLSIRAGGIGVNLQ-AADTVIIFDTDWNPQVDLQAQAR-----AHRIG 1568 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 KR V V L NTI+E V K + + + A Sbjct: 1569 QKRDVLVLRLETVNTIEEQVRASAEHKLGVANQSITA 1605 >gi|73946679|ref|XP_860926.1| PREDICTED: similar to SWI/SNF-related matrix-associated actin-dependent regulator of chromatin a2 isoform b isoform 36 [Canis familiaris] Length = 1596 Score = 86.1 bits (212), Expect = 2e-15, Method: Composition-based stats. Identities = 31/160 (19%), Positives = 63/160 (39%), Gaps = 20/160 (12%) Query: 52 HDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAF---------PQGRTLDKDPCT 100 K + L+ I+ +A +++ S + ++ F G T +D Sbjct: 1072 ASGKFELLDRILPKLRATNHRVLLFCQMTSLMTIMEDYFAFRNFLYLRLDGTTKSEDRAA 1131 Query: 101 I-QEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 + +++NE + + + G GLNLQ + +V F W+ + Q R Sbjct: 1132 LLKKFNEPGSQYFIFLLSTRAGGLGLNLQ-AADTVVIFDSDWNPHQDLQA-----QDRAH 1185 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + G + V V L N+++E +L + K + ++ A Sbjct: 1186 RIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQA 1225 >gi|299756086|ref|XP_001829080.2| DNA repair protein RAD5 [Coprinopsis cinerea okayama7#130] gi|298411516|gb|EAU92715.2| DNA repair protein RAD5 [Coprinopsis cinerea okayama7#130] Length = 1494 Score = 86.1 bits (212), Expect = 2e-15, Method: Composition-based stats. Identities = 25/143 (17%), Positives = 57/143 (39%), Gaps = 19/143 (13%) Query: 65 KANAAPIIVAYHFNSDLARLQKAFPQGR--------TLDKDPC----TIQEWNEGKIPLL 112 +A+ +V + + L +++ A T+ ++ +++ G +L Sbjct: 1106 EADIVKTVVFSQWTTMLDKVEDALEVAGIRYDRLDGTMKREERIKAMDALKFDPG-CEVL 1164 Query: 113 FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIA 172 + G GLNL + +W+ Q ++RI + G R V LI Sbjct: 1165 LVSLKAGGVGLNLT-AAQRVYLMDPYWNPAVENQAVDRI-----HRLGQTRPVQTVKLII 1218 Query: 173 QNTIDELVLQRLRTKSTIQDLLL 195 + +I+ +L+ + K+ + ++ L Sbjct: 1219 EGSIEARLLEVQKKKTELANMTL 1241 >gi|239607541|gb|EEQ84528.1| DNA repair protein RAD16 [Ajellomyces dermatitidis ER-3] Length = 948 Score = 86.1 bits (212), Expect = 2e-15, Method: Composition-based stats. Identities = 29/168 (17%), Positives = 60/168 (35%), Gaps = 21/168 (12%) Query: 51 VHDEKIKALE-VIIE---KANAAPIIVAYHFNSDLA----RLQKAFPQGRTLD------K 96 KI+ L + + K IV F S L RL++ LD + Sbjct: 772 TSSTKIEMLVYDLFKLRSKKQTHKSIVFSQFTSMLQLVEWRLRRVGFNTVMLDGSMTPAQ 831 Query: 97 DPCTIQEW-NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTR 155 +I+ + N + + + G LNL + + WW+ Q +R Sbjct: 832 RQKSIEHFMNNVDVEVFLVSLKAGGVALNLTEASRVFI-VDPWWNPAAEWQSADRC---- 886 Query: 156 QRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETI 203 + G +R + L +++++ ++ K+ + +N + E + Sbjct: 887 -HRIGQRRPCVITRLCIEDSVESRMVLLQEKKANMIRGTINKDQSEAL 933 >gi|118083490|ref|XP_416560.2| PREDICTED: hypothetical protein [Gallus gallus] Length = 885 Score = 86.1 bits (212), Expect = 2e-15, Method: Composition-based stats. Identities = 26/165 (15%), Positives = 62/165 (37%), Gaps = 19/165 (11%) Query: 45 EKHWKEVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQKAFP---------QGRT 93 H E K+ L+ ++ +++ L LQ G Sbjct: 329 GDHIVE-ASGKLCLLDKLLSFLYDGGHRVLLFSQMTKLLDILQDYMDYRGYSYERLDGSV 387 Query: 94 LDKDPC-TIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIG 152 ++ I+ + + I + + G G+NL + ++F ++ + Q I R Sbjct: 388 RGEERHLAIKNFGQQPIFVFLLSTRAGGVGMNLT-AADTVIFTDSDFNPQNDLQAIAR-- 444 Query: 153 VTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + G + V + LI ++T++E++ +R +K + + ++ Sbjct: 445 ---AHRIGQHKPVKIIRLIGRDTVEEIIYRRAASKLRLTNAIVEG 486 >gi|114558328|ref|XP_001157874.1| PREDICTED: chromodomain helicase DNA binding protein 1-like isoform 5 [Pan troglodytes] Length = 877 Score = 86.1 bits (212), Expect = 2e-15, Method: Composition-based stats. Identities = 35/217 (16%), Positives = 79/217 (36%), Gaps = 35/217 (16%) Query: 1 MKQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDE--------EKHWKEVH 52 MK F+ E + ++ N S+ KC + +D H E Sbjct: 295 MKDLDAFENET-----AKKVKLQNILSQLRKC---VDHPYLFDGVEPEPFEVGDHLIE-A 345 Query: 53 DEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAFP---------QGRTLDKDPC-T 100 K+ L+ ++ + +++ L LQ G ++ Sbjct: 346 SGKLHLLDKLLAFLYSGGHRVLLFSQMTQMLDILQDYMDYRGYSYERVDGSVRGEERHLA 405 Query: 101 IQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 I+ + I + + G G+NL + ++F ++ + Q R + G Sbjct: 406 IKNFGRQPIFVFLLSTRAGGVGMNLT-AADTVIFVDSDFNPQNDLQAAAR-----AHRIG 459 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 ++V V LI ++T++E+V ++ +K + ++++ Sbjct: 460 QNKSVKVIRLIGRDTVEEIVYRKAASKLQLTNMIIEG 496 >gi|327283577|ref|XP_003226517.1| PREDICTED: chromodomain-helicase-DNA-binding protein 4-like [Anolis carolinensis] Length = 1918 Score = 86.1 bits (212), Expect = 2e-15, Method: Composition-based stats. Identities = 20/136 (14%), Positives = 46/136 (33%), Gaps = 18/136 (13%) Query: 67 NAAPIIVAYHFNSDLARLQ----------KAFPQGRTLDKDPCTIQEWNEGKIP--LLFA 114 +++ L L+ + G T + I +N P Sbjct: 1060 GGHRVLIFSQMTKMLDLLEDFLEHEGYKYERIDGGITGNMRQEAIDRFNAPGAPQFCFLL 1119 Query: 115 HPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQN 174 + G G+NL + ++ + W+ Q +R + G + V +Y + + Sbjct: 1120 STRAGGLGINL-ATADTVIIYDSDWNPHNDIQA-----FSRAHRIGQNKKVMIYRFVTRA 1173 Query: 175 TIDELVLQRLRTKSTI 190 +++E + Q + K + Sbjct: 1174 SVEERITQVAKKKMML 1189 >gi|297835980|ref|XP_002885872.1| hypothetical protein ARALYDRAFT_480306 [Arabidopsis lyrata subsp. lyrata] gi|297331712|gb|EFH62131.1| hypothetical protein ARALYDRAFT_480306 [Arabidopsis lyrata subsp. lyrata] Length = 1721 Score = 86.1 bits (212), Expect = 2e-15, Method: Composition-based stats. Identities = 39/231 (16%), Positives = 82/231 (35%), Gaps = 35/231 (15%) Query: 2 KQYHK--FQR---ELYCDLQGENIEAFNSASKTVKCL------QLANGAVYYDEEKHWKE 50 KQY+K +R +L ++G + N + KC + A+ D + K Sbjct: 869 KQYYKWILERNFHDLNKGVRGNQVSLLNIVVELKKCCNHPFLFESADHGYGGDINDNSKL 928 Query: 51 ----VHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQKAF---------PQGRTLD 95 + K+ L+ ++ + +++ L L + G T Sbjct: 929 DKIILSSGKLVILDKLLVRLRETKHRVLIFSQMVRMLDILAEYLSLRGFQFQRLDGSTKA 988 Query: 96 K-DPCTIQEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIG 152 + + +N + G G+NL + +V F W+ + Q + R Sbjct: 989 ELRQQAMDHFNAPASDDFCFLLSTRAGGLGINL-ATADTVVIFDSDWNPQNDLQAMSR-- 1045 Query: 153 VTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETI 203 + G + V +Y + +++E +L+R + K + L++ L E Sbjct: 1046 ---AHRIGQQEVVNIYRFVTSKSVEEEILERAKRKMVLDHLVIQKLNAEGR 1093 >gi|328716042|ref|XP_003245819.1| PREDICTED: chromodomain-helicase-DNA-binding protein Mi-2 homolog [Acyrthosiphon pisum] Length = 2002 Score = 86.1 bits (212), Expect = 2e-15, Method: Composition-based stats. Identities = 22/147 (14%), Positives = 52/147 (35%), Gaps = 19/147 (12%) Query: 56 IKALEVIIEKANAAPIIVAYHFNSDLARLQ----------KAFPQGRTLDKDPCTIQEWN 105 + + I+ N +++ L L+ + T ++ I +N Sbjct: 1053 LSKMLRILHDTN-HRVLIFSQMTKMLDILEDYLEGEGYKYERIDGSITGNQRQEAIDRFN 1111 Query: 106 EG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKR 163 + + + G G+NL + ++ + W+ Q +R + G Sbjct: 1112 APGAQQFVFLLSTRAGGLGINL-ATADTVIIYDSDWNPHNDIQA-----FSRAHRIGQAN 1165 Query: 164 AVFVYYLIAQNTIDELVLQRLRTKSTI 190 V +Y + +N+++E V Q + K + Sbjct: 1166 KVMIYRFVTRNSVEERVTQVAKRKMML 1192 >gi|71064092|gb|AAZ22501.1| Sth1p [Saccharomyces cerevisiae] Length = 1359 Score = 86.1 bits (212), Expect = 2e-15, Method: Composition-based stats. Identities = 30/147 (20%), Positives = 57/147 (38%), Gaps = 18/147 (12%) Query: 65 KANAAPIIVAYH------FNSDLAR---LQKAFPQGRTLDKDPC-TIQEWNEGKIPLL-- 112 KA+ +++ + D R L+ G T ++ + +N Sbjct: 804 KASGHRVLMFFQMTQVMDIMEDFLRMKDLKYMRLDGSTKTEERTEMLNAFNAPDSDYFCF 863 Query: 113 FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIA 172 + G GLNLQ + ++ F W+ + Q R + G K V + LI Sbjct: 864 LLSTRAGGLGLNLQT-ADTVIIFDTDWNPHQDLQA-----QDRAHRIGQKNEVRILRLIT 917 Query: 173 QNTIDELVLQRLRTKSTIQDLLLNALK 199 ++++E++L+R K I ++ A K Sbjct: 918 TDSVEEVILERAMQKLDIDGKVIQAGK 944 >gi|301788384|ref|XP_002929608.1| PREDICTED: chromodomain-helicase-DNA-binding protein 1-like [Ailuropoda melanoleuca] Length = 886 Score = 86.1 bits (212), Expect = 2e-15, Method: Composition-based stats. Identities = 34/216 (15%), Positives = 80/216 (37%), Gaps = 35/216 (16%) Query: 1 MKQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDE--------EKHWKEVH 52 MK F+ E+ + ++ N S+ KC + +D H E Sbjct: 285 MKDLDAFENEM-----AKKVKLQNVLSQLRKC---VDHPYLFDGVEPEPFEIGDHLIE-A 335 Query: 53 DEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAFP---------QGRTLDKDPC-T 100 K+ L+ ++ + +++ L LQ G ++ Sbjct: 336 SGKLYLLDKLLAFLYSRGHRVLLFSQMTQMLDILQDYMDYRGYSYERVDGSVRGEERHLA 395 Query: 101 IQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 I+ + + + + + G G+NL + ++F ++ + Q R + G Sbjct: 396 IKNFGQQPVFIFLLSTRAGGVGMNLT-AADTVIFVDSDFNPQNDLQAAAR-----AHRIG 449 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 ++V V LI ++T++E+V ++ +K + + ++ Sbjct: 450 QNKSVKVIRLIGRDTVEEIVYRKAASKLQLTNTIIE 485 >gi|256269545|gb|EEU04829.1| Sth1p [Saccharomyces cerevisiae JAY291] Length = 1359 Score = 86.1 bits (212), Expect = 2e-15, Method: Composition-based stats. Identities = 30/147 (20%), Positives = 57/147 (38%), Gaps = 18/147 (12%) Query: 65 KANAAPIIVAYH------FNSDLAR---LQKAFPQGRTLDKDPC-TIQEWNEGKIPLL-- 112 KA+ +++ + D R L+ G T ++ + +N Sbjct: 804 KASGHRVLMFFQMTQVMDIMEDFLRMKDLKYMRLDGSTKTEERTEMLNAFNAPDSDYFCF 863 Query: 113 FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIA 172 + G GLNLQ + ++ F W+ + Q R + G K V + LI Sbjct: 864 LLSTRAGGLGLNLQT-ADTVIIFDTDWNPHQDLQA-----QDRAHRIGQKNEVRILRLIT 917 Query: 173 QNTIDELVLQRLRTKSTIQDLLLNALK 199 ++++E++L+R K I ++ A K Sbjct: 918 TDSVEEVILERAMQKLDIDGKVIQAGK 944 >gi|261200215|ref|XP_002626508.1| DNA repair protein RAD16 [Ajellomyces dermatitidis SLH14081] gi|239593580|gb|EEQ76161.1| DNA repair protein RAD16 [Ajellomyces dermatitidis SLH14081] Length = 948 Score = 86.1 bits (212), Expect = 2e-15, Method: Composition-based stats. Identities = 29/168 (17%), Positives = 60/168 (35%), Gaps = 21/168 (12%) Query: 51 VHDEKIKALE-VIIE---KANAAPIIVAYHFNSDLA----RLQKAFPQGRTLD------K 96 KI+ L + + K IV F S L RL++ LD + Sbjct: 772 TSSTKIEMLVYDLFKLRSKKQTHKSIVFSQFTSMLQLVEWRLRRVGFNTVMLDGSMTPAQ 831 Query: 97 DPCTIQEW-NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTR 155 +I+ + N + + + G LNL + + WW+ Q +R Sbjct: 832 RQKSIEHFMNNVDVEVFLVSLKAGGVALNLTEASRVFI-VDPWWNPAAEWQSADRC---- 886 Query: 156 QRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETI 203 + G +R + L +++++ ++ K+ + +N + E + Sbjct: 887 -HRIGQRRPCVITRLCIEDSVESRMVLLQEKKANMIRGTINKDQSEAL 933 >gi|145350214|ref|XP_001419509.1| predicted protein [Ostreococcus lucimarinus CCE9901] gi|144579741|gb|ABO97802.1| predicted protein [Ostreococcus lucimarinus CCE9901] Length = 688 Score = 86.1 bits (212), Expect = 2e-15, Method: Composition-based stats. Identities = 30/149 (20%), Positives = 65/149 (43%), Gaps = 18/149 (12%) Query: 58 ALEVIIEKANAA-PIIVAYHFNSDLAR---LQK-------AFPQGRTLDKDPCTIQEWNE 106 LE + E+ + ++V +++ LA + K +D ++ +N Sbjct: 440 MLEALKERGDPTERVVVVSGYSASLATAEDICKKLNVTTSRLDGTVAVDLRTSIVKNFNS 499 Query: 107 GKI-PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 G+ ++ + G GLNL G N L+ + W+ +Q + RI + G + V Sbjct: 500 GQGGQVMLLSVVAGGAGLNL-VGANRLILMDVSWNPAHDRQAMGRIW-----RDGQTKPV 553 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 +Y L++ T+++ V +R K +++ + Sbjct: 554 TIYRLVSAGTVEQKVFERQLGKEVLKNTV 582 >gi|47228067|emb|CAF97696.1| unnamed protein product [Tetraodon nigroviridis] Length = 2331 Score = 86.1 bits (212), Expect = 2e-15, Method: Composition-based stats. Identities = 28/158 (17%), Positives = 58/158 (36%), Gaps = 20/158 (12%) Query: 55 KIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTL----------DKDPCTIQ 102 K+ L+ ++ + A +++ L L+ R L + I Sbjct: 1228 KLVLLDKLLPRLKAGGHKVLIFSQMVRCLDILEDYLINKRYLYERIDGRVRGNLRQAAID 1287 Query: 103 EWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 +++ + + G G+NL + V F W+ + Q R + G Sbjct: 1288 RFSKPDSDRFVFLLCTRAGGLGINLT-AADTCVIFDSDWNPQNDLQAQARC-----HRIG 1341 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNAL 198 +AV VY LI +N+ + +L + K + +L ++ Sbjct: 1342 QSKAVKVYRLITRNSYEREMLDKASLKLGLDRAVLQSM 1379 >gi|308475524|ref|XP_003099980.1| hypothetical protein CRE_20884 [Caenorhabditis remanei] gi|308266032|gb|EFP09985.1| hypothetical protein CRE_20884 [Caenorhabditis remanei] Length = 1429 Score = 86.1 bits (212), Expect = 2e-15, Method: Composition-based stats. Identities = 43/225 (19%), Positives = 82/225 (36%), Gaps = 35/225 (15%) Query: 3 QYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDE-----EKHWKEVH----- 52 Y ++ L D + + A + ++ V +L N ++ HWK Sbjct: 740 IYRHMKKGLLLDAKMSS-GARSLSNTIVHLRKLCNHPFLFETIEDSCRTHWKVNEVSGKD 798 Query: 53 ----DEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQ---------KAFPQGRTL-DK 96 K++ L+ I+ K A +++ + + + G T D+ Sbjct: 799 LMRVAGKLELLDRILPKLKATGHRVLMFFQMTKMMDIFEDYLHFRNHTYLRLDGSTKPDE 858 Query: 97 DPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 + +N L + G GLNLQ + ++ F W+ + Q Sbjct: 859 RGELLSLYNAPDSEYFLFMLSTRAGGLGLNLQT-ADTVIIFDSDWNPHQDMQA-----QD 912 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 R + G K+ V V LI N+++E +L R K + + ++ A K Sbjct: 913 RAHRIGQKKEVRVLRLITANSVEEKMLAVARYKLNVDEKVIQAGK 957 >gi|218197912|gb|EEC80339.1| hypothetical protein OsI_22408 [Oryza sativa Indica Group] Length = 4284 Score = 86.1 bits (212), Expect = 2e-15, Method: Composition-based stats. Identities = 29/157 (18%), Positives = 59/157 (37%), Gaps = 20/157 (12%) Query: 55 KIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKA--FPQGRTLDKDPCT--------IQ 102 K++ L+ ++ K A +++ L ++ + + + L D T I Sbjct: 1306 KLEMLDRLLPKLKATGHRVLLFSTMTRLLDVMEDYLVWKKYKYLRLDGHTSGQERGALID 1365 Query: 103 EWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 ++N + + G G+NLQ + ++ F W+ + Q R + G Sbjct: 1366 KFNNPNSQAFIFLLSIRAGGVGVNLQ-AADTVIIFDTDWNPQVDLQAQAR-----AHRIG 1419 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 K+ V V L T++E V K + + + A Sbjct: 1420 QKKEVLVLRLETVQTVEEQVRASAEHKLGVANQSITA 1456 >gi|154270293|ref|XP_001536002.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1] gi|150410016|gb|EDN05404.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1] Length = 884 Score = 86.1 bits (212), Expect = 2e-15, Method: Composition-based stats. Identities = 43/211 (20%), Positives = 78/211 (36%), Gaps = 31/211 (14%) Query: 5 HKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWK---EVHDEKIKALEV 61 +R+ C L IE S A A + ++ E KI+AL Sbjct: 671 QAIERQHKCPLCRAEIEDCKSLV--------APSADFGEDTNEIDIDPETTSSKIQALLK 722 Query: 62 IIEKANAAP---IIVAYHFNSDLARLQKAFP-----------QGRTLDKDPCTIQEWNEG 107 I+ AP +V + S L ++ + + +D N+ Sbjct: 723 ILTAKGQAPNTKTVVFSQWVSFLDIVEPQLVRNGITFARIDGKMSSAKRDAAMNALSNDS 782 Query: 108 KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFV 167 +L A C GLNL N ++ WW Q ++R+ + G KR + Sbjct: 783 NCTVLLASLNVCSVGLNL-VAANQVILADSWWAPAIEDQAVDRV-----YRLGQKRPTTI 836 Query: 168 YYLIAQNTIDELVLQRLRTKSTIQDLLLNAL 198 + L+ +N+I++ VL + + K +D ++ + Sbjct: 837 WRLVMENSIEDRVLDKQKEKHRKRDDRMSRV 867 >gi|312220832|emb|CBY00773.1| hypothetical protein [Leptosphaeria maculans] Length = 1533 Score = 86.1 bits (212), Expect = 2e-15, Method: Composition-based stats. Identities = 27/155 (17%), Positives = 54/155 (34%), Gaps = 21/155 (13%) Query: 51 VHDEKIKALE-VIIEKANAA---PIIVAYHFNSDLA----RLQKAFPQGRTLD------K 96 KI+ L + + + IV F S L RL++A LD + Sbjct: 872 TSSTKIEMLVYDLYKLRSKKQTLKSIVFSQFTSMLQLIEWRLRRAGFNTVMLDGSMSPAQ 931 Query: 97 DPCTIQEW-NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTR 155 +I + + + + G LNL + + WW+ Q +R Sbjct: 932 RQKSIDHFMTNPDVEVFLVSLKAGGVALNLTEASRVFI-VDPWWNPAAEWQSADRC---- 986 Query: 156 QRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 + G KR + L +++++ ++ K+ + Sbjct: 987 -HRIGQKRPCVITRLCIEDSVESRMVALQEKKAAM 1020 >gi|302206285|gb|ADL10627.1| Putative SNF2 family DNA/RNA helicase [Corynebacterium pseudotuberculosis C231] Length = 920 Score = 86.1 bits (212), Expect = 2e-15, Method: Composition-based stats. Identities = 32/150 (21%), Positives = 58/150 (38%), Gaps = 16/150 (10%) Query: 54 EKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQKAFPQGRT--LDKDPCTIQEWN---- 105 K++ + + ++A I++ +F L RL F Q ++ D I+ Sbjct: 723 AKVERIIELADEAASEGRNILIFSYFRDVLDRLHLEFDQRSVGIINGDVAPIKRQELVDT 782 Query: 106 --EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKR 163 +L A + G GLN+Q ++++ Q I R + G + Sbjct: 783 LGANGQDILLAQIGAGGVGLNIQK-ASVVILTEAQVKPALEDQAIAR-----AHRMGQTK 836 Query: 164 AVFVYYLIAQNTIDELVLQRLRTKSTIQDL 193 V VY ++ TIDE +L+ K + D Sbjct: 837 PVSVYRILGDETIDERLLEINAQKRKLFDE 866 >gi|300858572|ref|YP_003783555.1| hypothetical protein cpfrc_01155 [Corynebacterium pseudotuberculosis FRC41] gi|300686026|gb|ADK28948.1| hypothetical protein cpfrc_01155 [Corynebacterium pseudotuberculosis FRC41] gi|302330842|gb|ADL21036.1| Putative SNF2 family DNA/RNA helicase [Corynebacterium pseudotuberculosis 1002] gi|308276527|gb|ADO26426.1| Putative SNF2 family DNA/RNA helicase [Corynebacterium pseudotuberculosis I19] Length = 920 Score = 86.1 bits (212), Expect = 2e-15, Method: Composition-based stats. Identities = 32/150 (21%), Positives = 58/150 (38%), Gaps = 16/150 (10%) Query: 54 EKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQKAFPQGRT--LDKDPCTIQEWN---- 105 K++ + + ++A I++ +F L RL F Q ++ D I+ Sbjct: 723 AKVERIIELADEAASEGRNILIFSYFRDVLDRLHLEFDQRSVGIINGDVAPIKRQELVDT 782 Query: 106 --EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKR 163 +L A + G GLN+Q ++++ Q I R + G + Sbjct: 783 LGANGQDILLAQIGAGGVGLNIQK-ASVVILTEAQVKPALEDQAIAR-----AHRMGQTK 836 Query: 164 AVFVYYLIAQNTIDELVLQRLRTKSTIQDL 193 V VY ++ TIDE +L+ K + D Sbjct: 837 PVSVYRILGDETIDERLLEINAQKRKLFDE 866 >gi|134078079|emb|CAK40162.1| unnamed protein product [Aspergillus niger] Length = 1166 Score = 86.1 bits (212), Expect = 2e-15, Method: Composition-based stats. Identities = 30/161 (18%), Positives = 53/161 (32%), Gaps = 24/161 (14%) Query: 52 HDEKIKAL-EVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTL----------DKDPCT 100 K+ AL + +V F S L + + T Sbjct: 986 TSAKVHALLAHLARVPANTKSVVFSQFTSFLDLISPQLTRAGIHHVRLDGTMPHKARAET 1045 Query: 101 IQEWNEGKIP-------LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGV 153 + ++N + +L + G GLNL N+ + WW Q I+R+ Sbjct: 1046 LAQFNRHRHSTAPPPPTVLLISLRAGGVGLNLTAASNVFMM-DPWWSFAIEAQAIDRV-- 1102 Query: 154 TRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 + G R V V + +++I+ +L+ K I L Sbjct: 1103 ---HRMGQTRDVQVTRFVVKDSIEGRMLRVQERKMNIAGSL 1140 >gi|198432555|ref|XP_002131918.1| PREDICTED: similar to chromodomain helicase DNA binding protein 3 [Ciona intestinalis] Length = 1904 Score = 86.1 bits (212), Expect = 2e-15, Method: Composition-based stats. Identities = 23/160 (14%), Positives = 52/160 (32%), Gaps = 20/160 (12%) Query: 45 EKHWKEVHDEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQKAFP----QGRTLDK-- 96 E K+ L+ ++ K +++ L L+ + +D Sbjct: 993 EGTELTKTSGKLIVLQKMLRKLKDRGNRVLIFSQMTRMLDILEDFLEYEGYKYERIDGSI 1052 Query: 97 ----DPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 +I +N + G G+NL + + + W+ Q Sbjct: 1053 TGSIRQESIDRFNAPNSDHFAFLLSTRAGGLGINL-ATADTVFIYDSDWNPHNDIQA--- 1108 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 +R + G V +Y + +N+++E V + + K + Sbjct: 1109 --FSRAHRIGQTNKVMIYRFVTKNSVEERVAEVAKRKMML 1146 >gi|195354154|ref|XP_002043565.1| GM19418 [Drosophila sechellia] gi|194127733|gb|EDW49776.1| GM19418 [Drosophila sechellia] Length = 882 Score = 86.1 bits (212), Expect = 2e-15, Method: Composition-based stats. Identities = 22/137 (16%), Positives = 52/137 (37%), Gaps = 20/137 (14%) Query: 67 NAAPIIVAYHFNSDLARLQKAFPQGRTL-----------DKDPCTIQEWNEG--KIPLLF 113 + +++ + L + + F +G D I +N+ + + Sbjct: 602 DNHRVLLFSQMSKMLN-ILEHFLEGEGYQYDRIDGAIRGDLRQKAIDRFNDPGSEQFVFL 660 Query: 114 AHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQ 173 + G G+NL + ++ F W+ Q +R + G K+ V +Y + Sbjct: 661 LSTRAGGLGINL-ATADTVIIFDSDWNPHNDVQA-----FSRAHRMGQKKKVMIYRFVTH 714 Query: 174 NTIDELVLQRLRTKSTI 190 N+++E ++Q + K + Sbjct: 715 NSVEERIMQVAKRKMML 731 >gi|193787140|dbj|BAG52346.1| unnamed protein product [Homo sapiens] Length = 979 Score = 86.1 bits (212), Expect = 2e-15, Method: Composition-based stats. Identities = 22/160 (13%), Positives = 54/160 (33%), Gaps = 20/160 (12%) Query: 45 EKHWKEVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQ----------KAFPQGR 92 + K+ L+ +++K +++ L L+ + G Sbjct: 531 DGSSLVKSSGKLMLLQKMLKKLRDEGHRVLIFSQMTKMLDLLEDFLEYEGYKYERIDGGI 590 Query: 93 TLDKDPCTIQEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 T I +N + + G G+NL + ++ + W+ Q Sbjct: 591 TGGLRQEAIDRFNAPGAQQFCFLLSTRASGLGINL-ATADTVIIYDSDWNPHNDIQA--- 646 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 +R + G + V +Y + + +++E + Q + K + Sbjct: 647 --FSRAHRIGQNKKVMIYRFVTRASVEERITQVAKRKMML 684 >gi|114558326|ref|XP_001158033.1| PREDICTED: chromodomain helicase DNA binding protein 1-like isoform 8 [Pan troglodytes] Length = 896 Score = 86.1 bits (212), Expect = 2e-15, Method: Composition-based stats. Identities = 35/217 (16%), Positives = 79/217 (36%), Gaps = 35/217 (16%) Query: 1 MKQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDE--------EKHWKEVH 52 MK F+ E + ++ N S+ KC + +D H E Sbjct: 295 MKDLDAFENET-----AKKVKLQNILSQLRKC---VDHPYLFDGVEPEPFEVGDHLIE-A 345 Query: 53 DEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAFP---------QGRTLDKDPC-T 100 K+ L+ ++ + +++ L LQ G ++ Sbjct: 346 SGKLHLLDKLLAFLYSGGHRVLLFSQMTQMLDILQDYMDYRGYSYERVDGSVRGEERHLA 405 Query: 101 IQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 I+ + I + + G G+NL + ++F ++ + Q R + G Sbjct: 406 IKNFGRQPIFVFLLSTRAGGVGMNLT-AADTVIFVDSDFNPQNDLQAAAR-----AHRIG 459 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 ++V V LI ++T++E+V ++ +K + ++++ Sbjct: 460 QNKSVKVIRLIGRDTVEEIVYRKAASKLQLTNMIIEG 496 >gi|172764|gb|AAA35120.1| STH1 protein [Saccharomyces cerevisiae] Length = 1352 Score = 86.1 bits (212), Expect = 2e-15, Method: Composition-based stats. Identities = 30/147 (20%), Positives = 57/147 (38%), Gaps = 18/147 (12%) Query: 65 KANAAPIIVAYH------FNSDLAR---LQKAFPQGRTLDKDPC-TIQEWNEGKIPLL-- 112 KA+ +++ + D R L+ G T ++ + +N Sbjct: 804 KASGHRVLMFFQMTQVMDIMEDFLRMKDLKYMRLDGSTKTEERTEMLNAFNAPDSDYFCF 863 Query: 113 FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIA 172 + G GLNLQ + ++ F W+ + Q R + G K V + LI Sbjct: 864 LLSTRAGGLGLNLQT-ADTVIIFDTDWNPHQDLQA-----QDRAHRIGQKNEVRILRLIT 917 Query: 173 QNTIDELVLQRLRTKSTIQDLLLNALK 199 ++++E++L+R K I ++ A K Sbjct: 918 TDSVEEVILERAMQKLDIDGKVIQAGK 944 >gi|238880168|gb|EEQ43806.1| conserved hypothetical protein [Candida albicans WO-1] Length = 1097 Score = 86.1 bits (212), Expect = 2e-15, Method: Composition-based stats. Identities = 34/168 (20%), Positives = 67/168 (39%), Gaps = 27/168 (16%) Query: 47 HWKEVHDEKIKA---------LEVIIEKANAAPIIVAYHFNSDLARLQK---------AF 88 WK ++ + + L+ II+ +++ F L L++ A Sbjct: 928 KWKLGDEKFLDSGKVIELGKILQQIID-NKGEKVLIFSLFTQVLDILERVLSIFNYKFAR 986 Query: 89 PQGRTLDKDPCT-IQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 G T ++ I +N + KI + + G G+NL N ++ F ++ E +Q Sbjct: 987 LDGNTPVQERQDLIDLFNQDDKIHIFLISTKAGGVGINL-VAANHVIMFDQSFNPHEDKQ 1045 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 +R + G + V VY LI+ TI++ + R K + + + Sbjct: 1046 AEDR-----AHRVGQTKEVKVYRLISDETIEKNIFSVARNKLELDEKI 1088 >gi|190406337|gb|EDV09604.1| SNF2-family ATP dependent chromatin remodeling factor snf21 [Saccharomyces cerevisiae RM11-1a] Length = 1359 Score = 86.1 bits (212), Expect = 2e-15, Method: Composition-based stats. Identities = 30/147 (20%), Positives = 57/147 (38%), Gaps = 18/147 (12%) Query: 65 KANAAPIIVAYH------FNSDLAR---LQKAFPQGRTLDKDPC-TIQEWNEGKIPLL-- 112 KA+ +++ + D R L+ G T ++ + +N Sbjct: 804 KASGHRVLMFFQMTQVMDIMEDFLRMKDLKYMRLDGSTKTEERTEMLNAFNAPDSDYFCF 863 Query: 113 FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIA 172 + G GLNLQ + ++ F W+ + Q R + G K V + LI Sbjct: 864 LLSTRAGGLGLNLQT-ADTVIIFDTDWNPHQDLQA-----QDRAHRIGQKNEVRILRLIT 917 Query: 173 QNTIDELVLQRLRTKSTIQDLLLNALK 199 ++++E++L+R K I ++ A K Sbjct: 918 TDSVEEVILERAMQKLDIDGKVIQAGK 944 >gi|115389076|ref|XP_001212043.1| DNA repair protein RAD16 [Aspergillus terreus NIH2624] gi|114194439|gb|EAU36139.1| DNA repair protein RAD16 [Aspergillus terreus NIH2624] Length = 963 Score = 86.1 bits (212), Expect = 2e-15, Method: Composition-based stats. Identities = 29/168 (17%), Positives = 56/168 (33%), Gaps = 21/168 (12%) Query: 51 VHDEKIKALE----VIIEKANAAPIIVAYHFNSDLA----RLQKAFPQGRTLDKDPCTIQ 102 KI+ L + K IV F S L RL++A LD Q Sbjct: 787 TSSTKIEMLVYELYKLRSKKQTHKSIVFSQFTSMLQLVEWRLRRAGFNTVMLDGTMTPAQ 846 Query: 103 EWN-------EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTR 155 + + + G LNL + + WW+ Q +R Sbjct: 847 RQKSIDYFMKNVDVEVFLVSLKAGGVALNLTEASRVFI-VDPWWNPAAEWQSADRC---- 901 Query: 156 QRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETI 203 + G +R + L +++++ ++ K+ + + +N + E + Sbjct: 902 -HRIGQRRPCVITRLCIEDSVESRIVLLQEKKANLINGTINKDQGEAL 948 >gi|6322065|ref|NP_012140.1| Sth1p [Saccharomyces cerevisiae S288c] gi|417373|sp|P32597|STH1_YEAST RecName: Full=Nuclear protein STH1/NPS1; AltName: Full=ATP-dependent helicase STH1; AltName: Full=Chromatin structure-remodeling complex protein STH1; AltName: Full=SNF2 homolog gi|218449|dbj|BAA01446.1| nuclear protein [Saccharomyces cerevisiae] gi|599991|emb|CAA86866.1| nuclear protein [Saccharomyces cerevisiae] gi|285812528|tpg|DAA08427.1| TPA: Sth1p [Saccharomyces cerevisiae S288c] Length = 1359 Score = 86.1 bits (212), Expect = 2e-15, Method: Composition-based stats. Identities = 30/147 (20%), Positives = 57/147 (38%), Gaps = 18/147 (12%) Query: 65 KANAAPIIVAYH------FNSDLAR---LQKAFPQGRTLDKDPC-TIQEWNEGKIPLL-- 112 KA+ +++ + D R L+ G T ++ + +N Sbjct: 804 KASGHRVLMFFQMTQVMDIMEDFLRMKDLKYMRLDGSTKTEERTEMLNAFNAPDSDYFCF 863 Query: 113 FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIA 172 + G GLNLQ + ++ F W+ + Q R + G K V + LI Sbjct: 864 LLSTRAGGLGLNLQT-ADTVIIFDTDWNPHQDLQA-----QDRAHRIGQKNEVRILRLIT 917 Query: 173 QNTIDELVLQRLRTKSTIQDLLLNALK 199 ++++E++L+R K I ++ A K Sbjct: 918 TDSVEEVILERAMQKLDIDGKVIQAGK 944 >gi|62472261|ref|NP_001014591.1| Mi-2, isoform B [Drosophila melanogaster] gi|61678453|gb|AAX52739.1| Mi-2, isoform B [Drosophila melanogaster] Length = 1983 Score = 86.1 bits (212), Expect = 2e-15, Method: Composition-based stats. Identities = 24/150 (16%), Positives = 54/150 (36%), Gaps = 20/150 (13%) Query: 55 KIKALEVIIEK--ANAAPIIVAYHFNSDLARLQ----------KAFPQGRTLDKDPCTIQ 102 K+ L ++++ A +++ L L+ + G T I Sbjct: 1054 KLVLLSKMLKQLKAQNHRVLIFSQMTKMLDILEDFLEGEQYKYERIDGGITGTLRQEAID 1113 Query: 103 EWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 +N + + + G G+NL + ++ + W+ Q +R + G Sbjct: 1114 RFNAPGAQQFVFLLSTRAGGLGINL-ATADTVIIYDSDWNPHNDIQA-----FSRAHRIG 1167 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 V +Y + +N+++E V Q + K + Sbjct: 1168 QANKVMIYRFVTRNSVEERVTQVAKRKMML 1197 >gi|134110664|ref|XP_776159.1| hypothetical protein CNBD2060 [Cryptococcus neoformans var. neoformans B-3501A] gi|50258827|gb|EAL21512.1| hypothetical protein CNBD2060 [Cryptococcus neoformans var. neoformans B-3501A] Length = 1123 Score = 86.1 bits (212), Expect = 2e-15, Method: Composition-based stats. Identities = 32/172 (18%), Positives = 76/172 (44%), Gaps = 19/172 (11%) Query: 44 EEKHWKEVH-DEKIKALEVIIEK--ANAAPIIVAYHFNSDLAR-------LQKAFPQGRT 93 EE+H + ++ K++ L++++ K A I++ F L R ++ G T Sbjct: 39 EEQHRQLLNASGKLQFLKLLLPKLIARGHRILLFSQFKMALDRNFLYGENVKHLRLDGDT 98 Query: 94 LD-KDPCTIQEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 + + ++N + + G G+NL + ++ ++ + QQ I R Sbjct: 99 QQAQRQKYMDQFNAPNSDYHIFLLTTRAGGVGINL-ASADTVILHDPDFNPHQDQQAIAR 157 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKET 202 + G ++ V V+ L+ + +++E ++ + + K + L++ + KET Sbjct: 158 -----AYRYGQEKRVLVFKLMIKGSVEETIINKGKRKMVLDHLVVQQMGKET 204 >gi|67528132|ref|XP_661876.1| hypothetical protein AN4272.2 [Aspergillus nidulans FGSC A4] gi|40739750|gb|EAA58940.1| hypothetical protein AN4272.2 [Aspergillus nidulans FGSC A4] gi|259481113|tpe|CBF74347.1| TPA: DNA excision repair protein Rad16, putative (AFU_orthologue; AFUA_7G03820) [Aspergillus nidulans FGSC A4] Length = 849 Score = 86.1 bits (212), Expect = 2e-15, Method: Composition-based stats. Identities = 26/143 (18%), Positives = 51/143 (35%), Gaps = 17/143 (11%) Query: 72 IVAYHFNSDLA----RLQKAFPQGRTLDKDPCTIQEW-------NEGKIPLLFAHPASCG 120 IV F S L RL++A LD Q N + + + G Sbjct: 698 IVFSQFTSMLQLVEWRLRRAGFNTVMLDGTMSPAQRQKSIDYFMNNVNVEVFLVSLKAGG 757 Query: 121 HGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELV 180 LNL + + WW+ Q +R + G +R + L +++++ + Sbjct: 758 VALNLTEASRVFI-VDPWWNPAAEWQSADRC-----HRIGQRRPCVITRLCIEDSVESRI 811 Query: 181 LQRLRTKSTIQDLLLNALKKETI 203 + K+ + + +N + E + Sbjct: 812 VMLQEKKANMINGTINKDQGEAL 834 >gi|258576005|ref|XP_002542184.1| conserved hypothetical protein [Uncinocarpus reesii 1704] gi|237902450|gb|EEP76851.1| conserved hypothetical protein [Uncinocarpus reesii 1704] Length = 960 Score = 86.1 bits (212), Expect = 2e-15, Method: Composition-based stats. Identities = 27/138 (19%), Positives = 50/138 (36%), Gaps = 17/138 (12%) Query: 66 ANAAPIIVAYHFNSDLARLQKAF----------PQGRTLDKDPCTIQEWN-EGKIPLLFA 114 ++ ++V H L LQ F + + + ++N + + + Sbjct: 616 SHGDKVLVFSHSVRLLKMLQLLFNHTSYNVSYLDGAMSYEDRAKVVNDFNADPRQFVFLI 675 Query: 115 HPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQN 174 + G GLN+ N +V W+ Q R + G R V V+ L++ Sbjct: 676 STKAGGVGLNIT-SANKVVVVDPNWNPSHDLQA-----QDRAYRIGQLRDVEVFRLVSAG 729 Query: 175 TIDELVLQRLRTKSTIQD 192 TI+E+V R K + Sbjct: 730 TIEEIVYARQIYKQQQAN 747 >gi|325090620|gb|EGC43930.1| DNA repair protein RAD16 [Ajellomyces capsulatus H88] Length = 848 Score = 86.1 bits (212), Expect = 3e-15, Method: Composition-based stats. Identities = 28/168 (16%), Positives = 60/168 (35%), Gaps = 21/168 (12%) Query: 51 VHDEKIKALE-VIIEKANAA---PIIVAYHFNSDLA----RLQKAFPQGRTLD------K 96 KI+ L + + + IV F S L RL++ LD + Sbjct: 672 TSSTKIEMLVYDLFKLRSKKRTHKSIVFSQFTSMLQLVEWRLRRVGFNTVMLDGSMTPAQ 731 Query: 97 DPCTIQEW-NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTR 155 +I+ + N + + + G LNL + + WW+ Q +R Sbjct: 732 RQKSIEHFMNNVDVEVFLVSLKAGGVALNLTEASRVFI-VDPWWNPAAEWQSADRC---- 786 Query: 156 QRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETI 203 + G +R + L +++++ ++ K+ + +N + E + Sbjct: 787 -HRIGQRRPCVITRLCIEDSVESRMVLLQEKKANMIRGTINKDQSEAL 833 >gi|240278465|gb|EER41971.1| DNA repair protein RAD16 [Ajellomyces capsulatus H143] Length = 848 Score = 86.1 bits (212), Expect = 3e-15, Method: Composition-based stats. Identities = 28/168 (16%), Positives = 60/168 (35%), Gaps = 21/168 (12%) Query: 51 VHDEKIKALE-VIIEKANAA---PIIVAYHFNSDLA----RLQKAFPQGRTLD------K 96 KI+ L + + + IV F S L RL++ LD + Sbjct: 672 TSSTKIEMLVYDLFKLRSKKRTHKSIVFSQFTSMLQLVEWRLRRVGFNTVMLDGSMTPAQ 731 Query: 97 DPCTIQEW-NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTR 155 +I+ + N + + + G LNL + + WW+ Q +R Sbjct: 732 RQKSIEHFMNNVDVEVFLVSLKAGGVALNLTEASRVFI-VDPWWNPAAEWQSADRC---- 786 Query: 156 QRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETI 203 + G +R + L +++++ ++ K+ + +N + E + Sbjct: 787 -HRIGQRRPCVITRLCIEDSVESRMVLLQEKKANMIRGTINKDQSEAL 833 >gi|260948588|ref|XP_002618591.1| hypothetical protein CLUG_02050 [Clavispora lusitaniae ATCC 42720] gi|238848463|gb|EEQ37927.1| hypothetical protein CLUG_02050 [Clavispora lusitaniae ATCC 42720] Length = 1186 Score = 86.1 bits (212), Expect = 3e-15, Method: Composition-based stats. Identities = 24/116 (20%), Positives = 45/116 (38%), Gaps = 7/116 (6%) Query: 87 AFPQGRTLDKDPCTIQEWNEGKI-PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQ 145 + K + +N + + G G+NL G + ++ F W+ Sbjct: 801 RMDGSTPIGKRQQLVDTFNANEYYHVFLLTTKVGGLGVNLT-GADRVIIFDPDWNPSTDI 859 Query: 146 QMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 Q ER + G KR + +Y L+ TI+E + R K+ + + +L K+ Sbjct: 860 QARERAW-----RLGQKRDITIYRLMTAGTIEEKIYHRQIFKTFLTNKILKDPKQR 910 >gi|225556044|gb|EEH04334.1| DNA repair protein RAD16 [Ajellomyces capsulatus G186AR] Length = 848 Score = 86.1 bits (212), Expect = 3e-15, Method: Composition-based stats. Identities = 28/168 (16%), Positives = 60/168 (35%), Gaps = 21/168 (12%) Query: 51 VHDEKIKALE-VIIEKANAA---PIIVAYHFNSDLA----RLQKAFPQGRTLD------K 96 KI+ L + + + IV F S L RL++ LD + Sbjct: 672 TSSTKIEMLVYDLFKLRSKKRTHKSIVFSQFTSMLQLVEWRLRRVGFNTVMLDGSMTPAQ 731 Query: 97 DPCTIQEW-NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTR 155 +I+ + N + + + G LNL + + WW+ Q +R Sbjct: 732 RQKSIEHFMNNVDVEVFLVSLKAGGVALNLTEASRVFI-VDPWWNPAAEWQSADRC---- 786 Query: 156 QRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETI 203 + G +R + L +++++ ++ K+ + +N + E + Sbjct: 787 -HRIGQRRPCVITRLCIEDSVESRMVLLQEKKANMIRGTINKDQSEAL 833 >gi|224001656|ref|XP_002290500.1| predicted protein [Thalassiosira pseudonana CCMP1335] gi|220973922|gb|EED92252.1| predicted protein [Thalassiosira pseudonana CCMP1335] Length = 1653 Score = 86.1 bits (212), Expect = 3e-15, Method: Composition-based stats. Identities = 25/108 (23%), Positives = 46/108 (42%), Gaps = 8/108 (7%) Query: 94 LDKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERI 151 L K + +N P + + G GLNL + ++ F W+ Q Sbjct: 1134 LRKREKRMYMFNAPDSPYFIFLLSTRAGGLGLNL-ATADTVIIFDSDWNPMMDLQA---- 1188 Query: 152 GVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 R + G ++ V V+ +I Q+ ++E +L R K + +L++ A K Sbjct: 1189 -QDRAHRIGQRKDVRVFRIITQSPVEEKILSRATEKLHMNELVVEAGK 1235 >gi|242818381|ref|XP_002487106.1| RSC complex subunit (Sth1), putative [Talaromyces stipitatus ATCC 10500] gi|218713571|gb|EED12995.1| RSC complex subunit (Sth1), putative [Talaromyces stipitatus ATCC 10500] Length = 1420 Score = 86.1 bits (212), Expect = 3e-15, Method: Composition-based stats. Identities = 30/147 (20%), Positives = 55/147 (37%), Gaps = 18/147 (12%) Query: 65 KANAAPIIVAYH------FNSDLAR---LQKAFPQGRTL-DKDPCTIQEWNEG--KIPLL 112 KA +++ + D R L+ G T D ++ +N Sbjct: 877 KATGHRVLLFFQMTQIMNIMEDFLRFRGLKYLRLDGSTKSDDRSELLKLFNAPNSDYFCF 936 Query: 113 FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIA 172 + G GLNLQ + ++ + W+ + Q R + G K V + LI Sbjct: 937 LLSTRAGGLGLNLQT-ADTVIIYDSDWNPHQDLQA-----QDRAHRIGQKNEVRILRLIT 990 Query: 173 QNTIDELVLQRLRTKSTIQDLLLNALK 199 N+++E +L R + K + ++ A K Sbjct: 991 SNSVEEKILGRAQFKLDMDGKVIQAGK 1017 >gi|209877158|ref|XP_002140021.1| chromatin remodelling complex SNF2H [Cryptosporidium muris RN66] gi|209555627|gb|EEA05672.1| chromatin remodelling complex SNF2H, putative [Cryptosporidium muris RN66] Length = 1288 Score = 86.1 bits (212), Expect = 3e-15, Method: Composition-based stats. Identities = 33/218 (15%), Positives = 77/218 (35%), Gaps = 30/218 (13%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYD---------EEKHWKEVH 52 K Y + L + ++ ++ N +D E H E Sbjct: 473 KIYSELLTRNLDILNNVTYNKTQMLNLLMQLRKVCNHPYLFDGVEPGPPYVEGFHMVE-A 531 Query: 53 DEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKA-----FPQGRTLDKDPCT----- 100 K+ L ++ K + + +++ L + +P R P Sbjct: 532 SGKMVLLHKLLPKLFSQGSRVLLFSQMTRLLDIIDDYLRWCGYPYCRIDGSTPGIERQER 591 Query: 101 IQEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQ 158 I +N+ + + G G+NL ++++ F ++ + Q ++R + Sbjct: 592 IDLFNKSGSDKLIFLLSTRAGGIGINL-ATADVVILFDSDFNPQMDLQAMDR-----AHR 645 Query: 159 AGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 G K+ V VY + + +++E +++R K + L++ Sbjct: 646 IGQKKTVTVYRFVTEKSVEERIVERAAKKLKLDSLIIQ 683 >gi|170031684|ref|XP_001843714.1| chromodomain helicase DNA binding protein [Culex quinquefasciatus] gi|167870885|gb|EDS34268.1| chromodomain helicase DNA binding protein [Culex quinquefasciatus] Length = 2039 Score = 86.1 bits (212), Expect = 3e-15, Method: Composition-based stats. Identities = 25/160 (15%), Positives = 59/160 (36%), Gaps = 20/160 (12%) Query: 53 DEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQKAFPQ---------GRTLDK-DPCT 100 K+ L+ ++ + +++ L L + + G + Sbjct: 912 SGKLVLLDKLLCRLKETGHRVLIFSQMVRMLDILAEYLQKRHFSFQRLDGSIKGELRKQA 971 Query: 101 IQEWN-EGKIPL-LFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQ 158 + +N EG + G G+NL + ++ F W+ + Q R + Sbjct: 972 LDHFNAEGSTDFCFLLSTRAGGLGINL-ATADTVIIFDSDWNPQNDLQAQAR-----AHR 1025 Query: 159 AGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNAL 198 G K V +Y L+ +++E +++R + K + L++ + Sbjct: 1026 IGQKNQVNIYRLVTAKSVEEDIVERAKKKMVLDHLVIQRM 1065 >gi|154275942|ref|XP_001538816.1| DNA repair protein RAD16 [Ajellomyces capsulatus NAm1] gi|150413889|gb|EDN09254.1| DNA repair protein RAD16 [Ajellomyces capsulatus NAm1] Length = 927 Score = 86.1 bits (212), Expect = 3e-15, Method: Composition-based stats. Identities = 28/168 (16%), Positives = 60/168 (35%), Gaps = 21/168 (12%) Query: 51 VHDEKIKALE-VIIEKANAA---PIIVAYHFNSDLA----RLQKAFPQGRTLD------K 96 KI+ L + + + IV F S L RL++ LD + Sbjct: 751 TSSTKIEMLVYDLFKLRSKKRTHKSIVFSQFTSMLQLVEWRLRRVGFNTVMLDGSMTPAQ 810 Query: 97 DPCTIQEW-NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTR 155 +I+ + N + + + G LNL + + WW+ Q +R Sbjct: 811 RQKSIEHFMNNVDVEVFLVSLKAGGVALNLTEASRVFI-VDPWWNPAAEWQSADRC---- 865 Query: 156 QRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETI 203 + G +R + L +++++ ++ K+ + +N + E + Sbjct: 866 -HRIGQRRPCVITRLCIEDSVESRMVLLQEKKANMIRGTINKDQSEAL 912 >gi|24667055|ref|NP_649154.2| Mi-2, isoform A [Drosophila melanogaster] gi|281366478|ref|NP_001163476.1| Mi-2, isoform C [Drosophila melanogaster] gi|13124018|sp|O97159|CHDM_DROME RecName: Full=Chromodomain-helicase-DNA-binding protein Mi-2 homolog; AltName: Full=ATP-dependent helicase Mi-2; Short=dMi-2 gi|23093096|gb|AAF49099.2| Mi-2, isoform A [Drosophila melanogaster] gi|272455249|gb|ACZ94747.1| Mi-2, isoform C [Drosophila melanogaster] Length = 1982 Score = 86.1 bits (212), Expect = 3e-15, Method: Composition-based stats. Identities = 24/150 (16%), Positives = 54/150 (36%), Gaps = 20/150 (13%) Query: 55 KIKALEVIIEK--ANAAPIIVAYHFNSDLARLQ----------KAFPQGRTLDKDPCTIQ 102 K+ L ++++ A +++ L L+ + G T I Sbjct: 1053 KLVLLSKMLKQLKAQNHRVLIFSQMTKMLDILEDFLEGEQYKYERIDGGITGTLRQEAID 1112 Query: 103 EWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 +N + + + G G+NL + ++ + W+ Q +R + G Sbjct: 1113 RFNAPGAQQFVFLLSTRAGGLGINL-ATADTVIIYDSDWNPHNDIQA-----FSRAHRIG 1166 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 V +Y + +N+++E V Q + K + Sbjct: 1167 QANKVMIYRFVTRNSVEERVTQVAKRKMML 1196 >gi|296805505|ref|XP_002843577.1| DNA repair protein RAD16 [Arthroderma otae CBS 113480] gi|238844879|gb|EEQ34541.1| DNA repair protein RAD16 [Arthroderma otae CBS 113480] Length = 867 Score = 86.1 bits (212), Expect = 3e-15, Method: Composition-based stats. Identities = 29/168 (17%), Positives = 58/168 (34%), Gaps = 21/168 (12%) Query: 51 VHDEKIKALE-VIIEKANAA---PIIVAYHFNSDLA----RLQKAFPQGRTLDKDPCTIQ 102 KI+ L + + + IV F S L RL +A LD +Q Sbjct: 691 TSSTKIEMLVYDLYQLRDKKRTNKSIVFSQFTSMLQLVEWRLHRAGISTVMLDGSMSPVQ 750 Query: 103 EW-------NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTR 155 N+ + + G LNL + + WW+ Q +R Sbjct: 751 RQRSIDHFMNDIDTEVFLVSLKAGGVALNLTEASRVFI-VDPWWNPAAEWQSADRC---- 805 Query: 156 QRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETI 203 + G +R + L +++++ ++ K+ + + +N + E + Sbjct: 806 -HRIGQRRPCVITRLCIEDSVESRMVLLQEKKANMINGTINKGQSEAL 852 >gi|156547006|ref|XP_001600490.1| PREDICTED: similar to helicase [Nasonia vitripennis] Length = 843 Score = 86.1 bits (212), Expect = 3e-15, Method: Composition-based stats. Identities = 25/155 (16%), Positives = 63/155 (40%), Gaps = 19/155 (12%) Query: 53 DEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQKAF---------PQGRTLDKDPCT- 100 K K L+ ++ + + +++ F L L++ G+T + Sbjct: 648 SGKFKKLDELLPQLKNDGHRVLIFSQFTMILDILEEYLTIRGHRYLRLDGQTPVMERQDL 707 Query: 101 IQEWNEG-KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQA 159 I E+ E +I + + G G+NL +++ + ++ +Q +R + Sbjct: 708 IDEYTEDSEIFIFLLSTRAGGLGINLTSADTVIIH-DIDFNPYNDKQAGDRC-----HRV 761 Query: 160 GFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 G + V + L+ ++TI+E + + + K ++ + Sbjct: 762 GQTKPVRIIRLLGKDTIEEGMYKITQEKLNLEQKI 796 >gi|119193650|ref|XP_001247431.1| hypothetical protein CIMG_01202 [Coccidioides immitis RS] Length = 1034 Score = 86.1 bits (212), Expect = 3e-15, Method: Composition-based stats. Identities = 28/158 (17%), Positives = 58/158 (36%), Gaps = 18/158 (11%) Query: 52 HDEKIKALEVIIEKANAA-PIIVAYHFNSDLARLQ----------KAFPQGRTLDKDPCT 100 KI+ L I+++ IV F S L +++ + G D + Sbjct: 783 SSTKIRHLLRILKREAGEFKFIVFSVFTSMLDKIEPFLKSAGIGYARYDGGMRNDLREAS 842 Query: 101 IQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQA 159 +++ +L + GLNL + +V +W+ +Q I+R+ + Sbjct: 843 LEKLRHSSSTRVLLCSLRAGSLGLNLT-AASRVVILEPFWNPFVEEQAIDRV-----HRL 896 Query: 160 GFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 V VY + ++T++E +L K + + Sbjct: 897 NQTVDVKVYKMTIKDTVEERILDLQERKRELASATIEG 934 >gi|302769197|ref|XP_002968018.1| hypothetical protein SELMODRAFT_440203 [Selaginella moellendorffii] gi|300164756|gb|EFJ31365.1| hypothetical protein SELMODRAFT_440203 [Selaginella moellendorffii] Length = 1234 Score = 86.1 bits (212), Expect = 3e-15, Method: Composition-based stats. Identities = 38/220 (17%), Positives = 79/220 (35%), Gaps = 35/220 (15%) Query: 6 KFQRELYCDLQGENIEAFNSASKTVKCLQLA-----------------NGAVYYDEEKHW 48 + QR Y L ++I+A N+ + + L +A G Y+ E Sbjct: 438 QMQRNYYKALLQKDIDAINTGGERRRLLNIAMQLRKCCNHPYLFQGAEPGPPYFTGEHLV 497 Query: 49 KEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQK----------AFPQGRTLDKDP 98 + + + K ++ +++ L L+ G + + Sbjct: 498 ENSGKMVLLDKLLPKLKQRSSRVLIFSQMTRLLDILEDYCIFRGYPSCRIDGGTSGEDRE 557 Query: 99 CTIQEWNE--GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 I+ +N + + + G G+NL +I++ + W+ + Q R Sbjct: 558 FAIEAFNREGSEKFIFLLSTRAGGLGINL-ATADIVILYDSDWNPQVDLQA-----QDRA 611 Query: 157 RQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + G K+ V V+ Q TI+E V++R K + L++ Sbjct: 612 HRIGQKKEVQVFRFCTQYTIEEKVIERAYKKLALDALVIQ 651 >gi|301096537|ref|XP_002897365.1| conserved hypothetical protein [Phytophthora infestans T30-4] gi|262107056|gb|EEY65108.1| conserved hypothetical protein [Phytophthora infestans T30-4] Length = 612 Score = 86.1 bits (212), Expect = 3e-15, Method: Composition-based stats. Identities = 22/107 (20%), Positives = 46/107 (42%), Gaps = 8/107 (7%) Query: 96 KDPCTIQEWNEGKIPL--LFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGV 153 K IQ + P+ L + G+NL + N LV F + W+ Q + Sbjct: 429 KRMEYIQRFTSPDSPVKLLLVSTRAGAEGINL-HAANRLVLFDVSWNPSNDHQSM----- 482 Query: 154 TRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKK 200 R + G + V VY L++ T++ + ++ K + ++++ ++ Sbjct: 483 CRSHRIGQAKTVHVYRLVSTGTMERRIYEQQMKKVDLSTSVVDSHER 529 >gi|255079182|ref|XP_002503171.1| SNF2 super family [Micromonas sp. RCC299] gi|226518437|gb|ACO64429.1| SNF2 super family [Micromonas sp. RCC299] Length = 1026 Score = 86.1 bits (212), Expect = 3e-15, Method: Composition-based stats. Identities = 21/141 (14%), Positives = 50/141 (35%), Gaps = 18/141 (12%) Query: 68 AAPIIVAYHFNSDLARLQKAFPQGRTL----------DKDPCTIQEWNEG--KIPLLFAH 115 + +++ L L+ R D I +N + + Sbjct: 484 GSRVLIFSQMTRLLDILEDYLLFRRYKYCRIDGNTDGDTREDMIDSYNAPGSEKFVFLLS 543 Query: 116 PASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNT 175 + G G+NL + +V + W+ + Q ++R + G + V V+ + Sbjct: 544 TRAGGLGINLTT-ADTVVIYDSDWNPQMDLQAMDR-----AHRIGQTKEVSVFRFCTDGS 597 Query: 176 IDELVLQRLRTKSTIQDLLLN 196 ++E V+++ K + L++ Sbjct: 598 VEEKVIEKAYKKLALDALVIQ 618 >gi|221330583|ref|NP_001137761.1| kismet, isoform C [Drosophila melanogaster] gi|220901895|gb|ACL82968.1| kismet, isoform C [Drosophila melanogaster] Length = 5517 Score = 86.1 bits (212), Expect = 3e-15, Method: Composition-based stats. Identities = 23/150 (15%), Positives = 54/150 (36%), Gaps = 18/150 (12%) Query: 65 KANAAPIIVAYHFNSDLARLQKAF---------PQGRTL-DKDPCTIQEWNEG--KIPLL 112 KAN +++ L L+ GR + I +++ + Sbjct: 2363 KANGHRVLIFSQMVRCLDILEDYLVYRKYPFERIDGRIRGNLRQEAIDRYSKPGSDRFVF 2422 Query: 113 FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIA 172 + G G+NL + ++ + W+ + Q R + G ++ V +Y L+ Sbjct: 2423 LLCTKAGGLGINLT-AADTVIIYDSDWNPQNDLQAQARC-----HRIGQRKMVKIYRLLC 2476 Query: 173 QNTIDELVLQRLRTKSTIQDLLLNALKKET 202 +NT + + + K + +L ++ + Sbjct: 2477 RNTYEREMFDKASMKLGLDKAVLQSMNTQG 2506 >gi|213406245|ref|XP_002173894.1| helicase SWR1 [Schizosaccharomyces japonicus yFS275] gi|212001941|gb|EEB07601.1| helicase SWR1 [Schizosaccharomyces japonicus yFS275] Length = 845 Score = 86.1 bits (212), Expect = 3e-15, Method: Composition-based stats. Identities = 26/142 (18%), Positives = 60/142 (42%), Gaps = 17/142 (11%) Query: 68 AAPIIVAYHFNSDLARLQKAFPQGRT----------LDKDPCTIQEWNEGKI-PLLFAHP 116 P + A F L L+ + +D I ++ E + + Sbjct: 709 GEPWMEATKFTQMLDILELVLKNLKVEFLRIDGSTQVDSRQDLIDQFYENENYKVFLLST 768 Query: 117 ASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTI 176 + G G+NL N+++ + + ++ + Q +R + G K+ V+V+ L+ ++T+ Sbjct: 769 KAGGFGINL-ACANVVILYDVSYNPFDDLQAEDR-----AHRVGQKKDVYVHRLVVKDTV 822 Query: 177 DELVLQRLRTKSTIQDLLLNAL 198 +E +L+ TK + + + A+ Sbjct: 823 EENILKLANTKVALDETISGAV 844 >gi|198476743|ref|XP_001357465.2| GA17619 [Drosophila pseudoobscura pseudoobscura] gi|198137832|gb|EAL34535.2| GA17619 [Drosophila pseudoobscura pseudoobscura] Length = 5605 Score = 86.1 bits (212), Expect = 3e-15, Method: Composition-based stats. Identities = 23/150 (15%), Positives = 54/150 (36%), Gaps = 18/150 (12%) Query: 65 KANAAPIIVAYHFNSDLARLQKAF---------PQGRTL-DKDPCTIQEWNEG--KIPLL 112 KAN +++ L L+ GR + I +++ + Sbjct: 2472 KANGHRVLIFSQMVRCLDILEDYLVYRKYPFERIDGRIRGNLRQEAIDRYSKPGSDRFVF 2531 Query: 113 FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIA 172 + G G+NL + ++ + W+ + Q R + G ++ V +Y L+ Sbjct: 2532 LLCTKAGGLGINLT-AADTVIIYDSDWNPQNDLQAQARC-----HRIGQRKMVKIYRLLC 2585 Query: 173 QNTIDELVLQRLRTKSTIQDLLLNALKKET 202 +NT + + + K + +L ++ + Sbjct: 2586 RNTYEREMFDKASMKLGLDKAVLQSMNTQG 2615 >gi|195470194|ref|XP_002087393.1| GE16349 [Drosophila yakuba] gi|194173494|gb|EDW87105.1| GE16349 [Drosophila yakuba] Length = 5330 Score = 86.1 bits (212), Expect = 3e-15, Method: Composition-based stats. Identities = 23/150 (15%), Positives = 54/150 (36%), Gaps = 18/150 (12%) Query: 65 KANAAPIIVAYHFNSDLARLQKAF---------PQGRTL-DKDPCTIQEWNEG--KIPLL 112 KAN +++ L L+ GR + I +++ + Sbjct: 2364 KANGHRVLIFSQMVRCLDILEDYLVYRKYPFERIDGRIRGNLRQEAIDRYSKPGSDRFVF 2423 Query: 113 FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIA 172 + G G+NL + ++ + W+ + Q R + G ++ V +Y L+ Sbjct: 2424 LLCTKAGGLGINLT-AADTVIIYDSDWNPQNDLQAQARC-----HRIGQRKMVKIYRLLC 2477 Query: 173 QNTIDELVLQRLRTKSTIQDLLLNALKKET 202 +NT + + + K + +L ++ + Sbjct: 2478 RNTYEREMFDKASMKLGLDKAVLQSMNTQG 2507 >gi|195436658|ref|XP_002066274.1| GK18181 [Drosophila willistoni] gi|194162359|gb|EDW77260.1| GK18181 [Drosophila willistoni] Length = 5689 Score = 86.1 bits (212), Expect = 3e-15, Method: Composition-based stats. Identities = 23/150 (15%), Positives = 54/150 (36%), Gaps = 18/150 (12%) Query: 65 KANAAPIIVAYHFNSDLARLQKAF---------PQGRTL-DKDPCTIQEWNEG--KIPLL 112 KAN +++ L L+ GR + I +++ + Sbjct: 2538 KANGHRVLIFSQMVRCLDILEDYLVYRKYPFERIDGRIRGNLRQEAIDRYSKPGSDRFVF 2597 Query: 113 FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIA 172 + G G+NL + ++ + W+ + Q R + G ++ V +Y L+ Sbjct: 2598 LLCTKAGGLGINLT-AADTVIIYDSDWNPQNDLQAQARC-----HRIGQRKMVKIYRLLC 2651 Query: 173 QNTIDELVLQRLRTKSTIQDLLLNALKKET 202 +NT + + + K + +L ++ + Sbjct: 2652 RNTYEREMFDKASMKLGLDKAVLQSMNTQG 2681 >gi|194853302|ref|XP_001968138.1| GG24671 [Drosophila erecta] gi|190660005|gb|EDV57197.1| GG24671 [Drosophila erecta] Length = 5335 Score = 86.1 bits (212), Expect = 3e-15, Method: Composition-based stats. Identities = 23/150 (15%), Positives = 54/150 (36%), Gaps = 18/150 (12%) Query: 65 KANAAPIIVAYHFNSDLARLQKAF---------PQGRTL-DKDPCTIQEWNEG--KIPLL 112 KAN +++ L L+ GR + I +++ + Sbjct: 2371 KANGHRVLIFSQMVRCLDILEDYLVYRKYPFERIDGRIRGNLRQEAIDRYSKPGSDRFVF 2430 Query: 113 FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIA 172 + G G+NL + ++ + W+ + Q R + G ++ V +Y L+ Sbjct: 2431 LLCTKAGGLGINLT-AADTVIIYDSDWNPQNDLQAQARC-----HRIGQRKMVKIYRLLC 2484 Query: 173 QNTIDELVLQRLRTKSTIQDLLLNALKKET 202 +NT + + + K + +L ++ + Sbjct: 2485 RNTYEREMFDKASMKLGLDKAVLQSMNTQG 2514 >gi|194766405|ref|XP_001965315.1| GF24504 [Drosophila ananassae] gi|190617925|gb|EDV33449.1| GF24504 [Drosophila ananassae] Length = 3217 Score = 86.1 bits (212), Expect = 3e-15, Method: Composition-based stats. Identities = 23/150 (15%), Positives = 54/150 (36%), Gaps = 18/150 (12%) Query: 65 KANAAPIIVAYHFNSDLARLQKAF---------PQGRTL-DKDPCTIQEWNEG--KIPLL 112 KAN +++ L L+ GR + I +++ + Sbjct: 2355 KANGHRVLIFSQMVRCLDILEDYLVYRKYPFERIDGRIRGNLRQEAIDRYSKPGSDRFVF 2414 Query: 113 FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIA 172 + G G+NL + ++ + W+ + Q R + G ++ V +Y L+ Sbjct: 2415 LLCTKAGGLGINLT-AADTVIIYDSDWNPQNDLQAQARC-----HRIGQRKMVKIYRLLC 2468 Query: 173 QNTIDELVLQRLRTKSTIQDLLLNALKKET 202 +NT + + + K + +L ++ + Sbjct: 2469 RNTYEREMFDKASMKLGLDKAVLQSMNTQG 2498 >gi|168052769|ref|XP_001778812.1| SNF2 family DNA-dependent ATPase [Physcomitrella patens subsp. patens] gi|162669818|gb|EDQ56398.1| SNF2 family DNA-dependent ATPase [Physcomitrella patens subsp. patens] Length = 2126 Score = 86.1 bits (212), Expect = 3e-15, Method: Composition-based stats. Identities = 34/186 (18%), Positives = 71/186 (38%), Gaps = 26/186 (13%) Query: 43 DEEKHWKEVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQKAF---------PQG 91 DE K + LE ++ + +++ L L+ G Sbjct: 1147 DELFRLLVTASGKFQLLEKLLPRLKEGGHRVLLFSQMTGMLDILEDFLTHLNFKFCRIDG 1206 Query: 92 RTL-DKDPCTIQEWN--EGKIPLLFAHPASCGHGLNLQYGGNILVFFSL--WW------D 140 TL + I ++N I + + G G+NL L + + +W Sbjct: 1207 STLASERQKQIADFNSTNSDIFIFLISTRAGGLGINLISLMLKLCWEGIRKFWLVLHFAS 1266 Query: 141 LEE----HQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 L ++ R + G + V VY LI + +++E +++R R K +++L+++ Sbjct: 1267 LSATDPDFNPFVDLQAQARAHRIGQENVVLVYQLITKCSVEEKIIERSRQKLAMENLVMS 1326 Query: 197 ALKKET 202 + +K+T Sbjct: 1327 SSEKDT 1332 >gi|115903652|ref|XP_794091.2| PREDICTED: similar to Brg1 [Strongylocentrotus purpuratus] gi|115972944|ref|XP_001188944.1| PREDICTED: similar to Brg1 [Strongylocentrotus purpuratus] Length = 1736 Score = 86.1 bits (212), Expect = 3e-15, Method: Composition-based stats. Identities = 31/157 (19%), Positives = 58/157 (36%), Gaps = 20/157 (12%) Query: 55 KIKALEVIIEKAN--AAPIIVAYHFNSDLARLQ-----KAFPQGRTLDKDPCT-----IQ 102 K + L+ I+ K I++ + + L+ + F R +Q Sbjct: 1144 KFELLDRILPKLKALGHRILLFCQMTTLMTILEDFFVYRGFKYLRLDGTTKADDRGILLQ 1203 Query: 103 EWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 +NE P + + G GLNLQ + ++ F W+ + Q R + G Sbjct: 1204 TFNEANCPYFIFMLSTRAGGLGLNLQT-ADTVILFDSDWNPHQDLQA-----QDRAHRIG 1257 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 V V L+ +++E +L R K + ++ A Sbjct: 1258 QVNEVRVLRLMTVQSVEEKILAAARWKMNMDSKIIQA 1294 >gi|118378915|ref|XP_001022631.1| HSA family protein [Tetrahymena thermophila] gi|89304398|gb|EAS02386.1| HSA family protein [Tetrahymena thermophila SB210] Length = 1232 Score = 86.1 bits (212), Expect = 3e-15, Method: Composition-based stats. Identities = 34/177 (19%), Positives = 70/177 (39%), Gaps = 24/177 (13%) Query: 37 NGAVYYDEEKHWKEVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQKAFP----- 89 N Y ++ W+ K + L+ ++ K +++ + +++ F Sbjct: 724 NSDAYQIDDMIWRV--SGKFELLDKMLAKLIRTGHRVLIFTQMTHVMDLMEEYFKLREDY 781 Query: 90 ------QGRTL-DKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWD 140 G T D+ + ++N+ P + + G GLNLQ + ++ F W+ Sbjct: 782 IKYLRLDGTTKADERGVKMAQFNQPNSPYNVFILSTRAGGLGLNLQT-ADTVIIFDSDWN 840 Query: 141 LEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + QQ R + G K V VY L+ I+E +L + K + ++++ A Sbjct: 841 PQMDQQA-----QDRAHRIGSKSEVRVYRLVTNTWIEEEILSKAAYKMGLDEMIIQA 892 >gi|17986031|ref|NP_523441.1| kismet, isoform A [Drosophila melanogaster] gi|7230509|gb|AAF43004.1|AF215703_1 KISMET-L long isoform [Drosophila melanogaster] gi|22945599|gb|AAF51527.3| kismet, isoform A [Drosophila melanogaster] Length = 5322 Score = 86.1 bits (212), Expect = 3e-15, Method: Composition-based stats. Identities = 23/150 (15%), Positives = 54/150 (36%), Gaps = 18/150 (12%) Query: 65 KANAAPIIVAYHFNSDLARLQKAF---------PQGRTL-DKDPCTIQEWNEG--KIPLL 112 KAN +++ L L+ GR + I +++ + Sbjct: 2363 KANGHRVLIFSQMVRCLDILEDYLVYRKYPFERIDGRIRGNLRQEAIDRYSKPGSDRFVF 2422 Query: 113 FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIA 172 + G G+NL + ++ + W+ + Q R + G ++ V +Y L+ Sbjct: 2423 LLCTKAGGLGINLT-AADTVIIYDSDWNPQNDLQAQARC-----HRIGQRKMVKIYRLLC 2476 Query: 173 QNTIDELVLQRLRTKSTIQDLLLNALKKET 202 +NT + + + K + +L ++ + Sbjct: 2477 RNTYEREMFDKASMKLGLDKAVLQSMNTQG 2506 >gi|239611529|gb|EEQ88516.1| SNF2 family helicase/ATPase [Ajellomyces dermatitidis ER-3] Length = 1148 Score = 86.1 bits (212), Expect = 3e-15, Method: Composition-based stats. Identities = 38/162 (23%), Positives = 67/162 (41%), Gaps = 19/162 (11%) Query: 46 KHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFN-------SDLARLQKAF--PQGRTL 94 K+ + +H K+ L ++ + N +V F L LQ F G T Sbjct: 935 KNDEWMHSGKVDKLCELLTRFKENGDRTLVFSQFTMVMDILEHVLQTLQMRFFRLDGSTS 994 Query: 95 DKDPC-TIQEWNEG-KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIG 152 +D T+ ++E IP+ + G G+NL N ++ F ++ +E Q Sbjct: 995 VEDRQSTLDAFHEQVDIPVFLLSTKAGGAGINL-ACANKVIIFDSSFNPQEDVQA----- 1048 Query: 153 VTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 R + G RAV V L+ ++TI+E + +TK + + Sbjct: 1049 ENRAHRVGQTRAVEVVRLVTRDTIEEQMYALGQTKLALDQRV 1090 >gi|12654665|gb|AAH01171.1|AAH01171 Unknown (protein for IMAGE:3355762) [Homo sapiens] Length = 896 Score = 86.1 bits (212), Expect = 3e-15, Method: Composition-based stats. Identities = 34/216 (15%), Positives = 79/216 (36%), Gaps = 33/216 (15%) Query: 1 MKQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYD-------EEKHWKEVHD 53 MK F+ E + ++ N S+ KC + +D E Sbjct: 294 MKDLDAFENET-----AKKVKLQNILSQLRKC---VDHPYLFDGVEPEPFEVGDHLTEAS 345 Query: 54 EKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAFP---------QGRTLDKDPC-TI 101 K+ L+ ++ + +++ L LQ G ++ I Sbjct: 346 GKLHLLDKLLAFLYSGGHRVLLFSQMTQMLDILQDYMDYRGYSYERVDGSVRGEERHLAI 405 Query: 102 QEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGF 161 + + + I + + G G+NL + ++F ++ + Q R + G Sbjct: 406 KNFGQQPIFVFLLSTRAGGVGMNLT-AADTVIFVDSDFNPQNDLQAAAR-----AHRIGQ 459 Query: 162 KRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 ++V V LI ++T++E+V ++ +K + ++++ Sbjct: 460 NKSVKVIRLIGRDTVEEIVYRKAASKLQLTNMIIEG 495 >gi|198433296|ref|XP_002124821.1| PREDICTED: similar to chromodomain helicase DNA binding protein 7 [Ciona intestinalis] Length = 4218 Score = 86.1 bits (212), Expect = 3e-15, Method: Composition-based stats. Identities = 20/151 (13%), Positives = 50/151 (33%), Gaps = 18/151 (11%) Query: 67 NAAPIIVAYHFNSDLARLQKAFPQGRTL----------DKDPCTIQEWNEG--KIPLLFA 114 +++ L L+ Q ++ I ++ + Sbjct: 1917 GGHKVLIFSQMVRVLDILEDYLVQRSYFYERIDGCIRGNERQMAIDRFSRKGSDRFVFLL 1976 Query: 115 HPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQN 174 + G G+NL + ++ F W+ + Q R + G ++ V +Y LI +N Sbjct: 1977 CTRAGGLGINLT-AADTVIIFDSDWNPQNDLQAQARC-----HRIGQQKPVKIYRLITRN 2030 Query: 175 TIDELVLQRLRTKSTIQDLLLNALKKETIHV 205 + + + + K + +L ++ + Sbjct: 2031 SYEREMFDKASLKLGLDKAVLQSISGRQDQI 2061 >gi|323348194|gb|EGA82445.1| Sth1p [Saccharomyces cerevisiae Lalvin QA23] Length = 1359 Score = 86.1 bits (212), Expect = 3e-15, Method: Composition-based stats. Identities = 30/147 (20%), Positives = 57/147 (38%), Gaps = 18/147 (12%) Query: 65 KANAAPIIVAYH------FNSDLAR---LQKAFPQGRTLDKDPC-TIQEWNEGKIPLL-- 112 KA+ +++ + D R L+ G T ++ + +N Sbjct: 804 KASGHRVLMFFQMTQVMDIMEDFLRMKDLKYMRLDGSTKTEERTEMLNXFNAPDSDYFCF 863 Query: 113 FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIA 172 + G GLNLQ + ++ F W+ + Q R + G K V + LI Sbjct: 864 LLSTRAGGLGLNLQT-ADTVIIFDTDWNPHQDLQA-----QDRAHRIGQKNEVRILRLIT 917 Query: 173 QNTIDELVLQRLRTKSTIQDLLLNALK 199 ++++E++L+R K I ++ A K Sbjct: 918 TDSVEEVILERAMQKLDIDGKVIQAGK 944 >gi|219122179|ref|XP_002181429.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1] gi|217407415|gb|EEC47352.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1] Length = 902 Score = 86.1 bits (212), Expect = 3e-15, Method: Composition-based stats. Identities = 38/223 (17%), Positives = 72/223 (32%), Gaps = 50/223 (22%) Query: 14 DLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIE--KANAAPI 71 L G I A A + L A+ + ++ K+ L +IE + N Sbjct: 464 KLCGHPILAEELAINVGRLLATAS------PDDLVQQ--SAKLCILLSLIENFRQNGHRT 515 Query: 72 IVAYHFNSDLARLQKAFP---------QGRTLDKDPC-TIQEWNEGK--IPLLFAHPASC 119 ++ L ++K G + ++D + ++N + + Sbjct: 516 LIFSQSTKMLDIIEKTLLSEGVELLRIDGSSKEQDRQRFVDDFNSNTSTTDAMLLSTKAA 575 Query: 120 GHGLNLQYGGNILVFFSLWW-----DLEEHQQ----------------------MIERIG 152 G GL L G + ++ + W +Q + Sbjct: 576 GVGLTL-VGADRVIIYDPSWYVSEARFALQEQRHLECAIAVTLLLFSLLSNRTPAEDSQA 634 Query: 153 VTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 V R + G R V VY LIA T++E + ++ K I+ + Sbjct: 635 VDRCYRIGQTRDVVVYRLIAAGTVEEKMYEKQVHKDGIRRTVF 677 >gi|327348460|gb|EGE77317.1| SNF2 family helicase/ATPase [Ajellomyces dermatitidis ATCC 18188] Length = 1179 Score = 86.1 bits (212), Expect = 3e-15, Method: Composition-based stats. Identities = 38/162 (23%), Positives = 67/162 (41%), Gaps = 19/162 (11%) Query: 46 KHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFN-------SDLARLQKAF--PQGRTL 94 K+ + +H K+ L ++ + N +V F L LQ F G T Sbjct: 966 KNDEWMHSGKVDKLCELLTRFKENGDRTLVFSQFTMVMDILEHVLQTLQMRFFRLDGSTS 1025 Query: 95 DKDPC-TIQEWNEG-KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIG 152 +D T+ ++E IP+ + G G+NL N ++ F ++ +E Q Sbjct: 1026 VEDRQSTLDAFHEQVDIPVFLLSTKAGGAGINL-ACANKVIIFDSSFNPQEDVQA----- 1079 Query: 153 VTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 R + G RAV V L+ ++TI+E + +TK + + Sbjct: 1080 ENRAHRVGQTRAVEVVRLVTRDTIEEQMYALGQTKLALDQRV 1121 >gi|324499657|gb|ADY39859.1| Chromodomain-helicase-DNA-binding protein 8 [Ascaris suum] Length = 2707 Score = 86.1 bits (212), Expect = 3e-15, Method: Composition-based stats. Identities = 22/145 (15%), Positives = 49/145 (33%), Gaps = 18/145 (12%) Query: 65 KANAAPIIVAYHFNSDLARLQK----------AFPQGRTLDKDPCTIQEWNEGKIP--LL 112 +A+ +++ L +++ D I +++ + Sbjct: 1452 RADGHKVLIFSQMVRVLDIIEEFLVVQNYTFERIDGNVRGDLRQTAIDRFSKKDSDRFVF 1511 Query: 113 FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIA 172 + G G+NL + ++ F W+ + Q R + G + V VY LI Sbjct: 1512 LLCTRAGGLGINLT-AADTVIIFDSDWNPQNDLQAQARC-----HRIGQTKMVKVYRLIT 1565 Query: 173 QNTIDELVLQRLRTKSTIQDLLLNA 197 NT + + + K + +L + Sbjct: 1566 CNTYEREMFDKASLKLGLDKAVLQS 1590 >gi|4325130|gb|AAD17276.1| dMi-2 protein [Drosophila melanogaster] Length = 1982 Score = 86.1 bits (212), Expect = 3e-15, Method: Composition-based stats. Identities = 24/150 (16%), Positives = 54/150 (36%), Gaps = 20/150 (13%) Query: 55 KIKALEVIIEK--ANAAPIIVAYHFNSDLARLQ----------KAFPQGRTLDKDPCTIQ 102 K+ L ++++ A +++ L L+ + G T I Sbjct: 1053 KLVLLSKMLKQLKAQNHRVLIFSQMTKMLDILEDFLEGEQYKYERIDGGITGTLRQEAID 1112 Query: 103 EWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 +N + + + G G+NL + ++ + W+ Q +R + G Sbjct: 1113 RFNAPGAQQFVFLLSTRAGGLGINL-ATADTVIIYDSDWNPHNDIQA-----FSRAHRIG 1166 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 V +Y + +N+++E V Q + K + Sbjct: 1167 QANKVMIYRFVTRNSVEERVTQVAKRKMML 1196 >gi|312215580|emb|CBX95532.1| similar to SNF2 family helicase/ATPase [Leptosphaeria maculans] Length = 1194 Score = 86.1 bits (212), Expect = 3e-15, Method: Composition-based stats. Identities = 38/203 (18%), Positives = 80/203 (39%), Gaps = 21/203 (10%) Query: 7 FQRELYCDLQGENIEAFNSASKTVKCLQLANG--AVYYDEEKHWKEVHDEKIKALEVIIE 64 + +++ + + I + +C QLA A+ E K+ + + K+ AL +++ Sbjct: 896 LREDMFAESNADIIYEELQLYQDYQCHQLATKYKALKKFELKNHEWMDSGKVTALLALLK 955 Query: 65 K--ANAAPIIVAYHFNS---------DLARLQKAFPQGRTLDKDPCTIQE--WNEGKIPL 111 K N +V F S D + G T + ++ + +++ I L Sbjct: 956 KYKENGDRALVFSQFTSVMDILGWVFDDHDINFMRMDGSTPIAERQSLMDVFYSDTSIEL 1015 Query: 112 LFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLI 171 S G G+NL N ++ F ++ ++ Q R + G R V V L+ Sbjct: 1016 FMISTKSGGAGINL-ACANKVIIFDSSFNPQDDIQA-----ENRAHRVGQTREVEVVRLV 1069 Query: 172 AQNTIDELVLQRLRTKSTIQDLL 194 + T++E + +K + ++ Sbjct: 1070 TKGTVEEQIYALGVSKLELDKMV 1092 >gi|198426669|ref|XP_002129254.1| PREDICTED: ATRX protein [Ciona intestinalis] Length = 1900 Score = 86.1 bits (212), Expect = 3e-15, Method: Composition-based stats. Identities = 32/205 (15%), Positives = 71/205 (34%), Gaps = 23/205 (11%) Query: 5 HKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVII- 63 + E ++ + K L + + ++ + +E I+ Sbjct: 1449 KELWFEKVMPSDNLLYDSVEMSGKITLLLSILKSSTMMGDKVVLFSQSLLTLDLIEDILR 1508 Query: 64 ------EKANAAP--IIVAYHFNS-DLARLQKAFPQGRTLDKDPCTIQEWNEG---KIPL 111 +P + + + D R+ + ++ I ++N + L Sbjct: 1509 YVTMDGSDNTRSPTGVRIMKWYKDVDYYRMDGSTKN----ERRKTIIDQFNNESDTRCRL 1564 Query: 112 LFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLI 171 + + G G+NL G N + F W+ Q I RI + G + ++Y I Sbjct: 1565 MLVSTRAGGIGINL-VGANRAIVFDASWNPTHDVQSIFRI-----YRFGQTKPCYIYRFI 1618 Query: 172 AQNTIDELVLQRLRTKSTIQDLLLN 196 AQ T++E + R K ++ +++ Sbjct: 1619 AQGTMEEKIYDRQVVKQSLASRVVD 1643 >gi|330982227|gb|EGH80330.1| SNF2-related:helicase [Pseudomonas syringae pv. aptata str. DSM 50252] Length = 93 Score = 86.1 bits (212), Expect = 3e-15, Method: Composition-based stats. Identities = 17/69 (24%), Positives = 34/69 (49%), Gaps = 5/69 (7%) Query: 129 GNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKS 188 + ++ + WW+ Q +R + G + VFVY +IA+ T++E + + R KS Sbjct: 1 ADTVIHYDPWWNPAAENQATDR-----AYRIGQDKPVFVYKMIARGTVEEKIQRLQREKS 55 Query: 189 TIQDLLLNA 197 + +L+ Sbjct: 56 ALASGVLDG 64 >gi|302783170|ref|XP_002973358.1| hypothetical protein SELMODRAFT_50459 [Selaginella moellendorffii] gi|300159111|gb|EFJ25732.1| hypothetical protein SELMODRAFT_50459 [Selaginella moellendorffii] Length = 710 Score = 86.1 bits (212), Expect = 3e-15, Method: Composition-based stats. Identities = 35/190 (18%), Positives = 66/190 (34%), Gaps = 27/190 (14%) Query: 15 LQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKA--NAAPII 72 L +I A + K+ LA D KH KI L ++E + Sbjct: 333 LDSTDIAAAEAMRKS--LAGLAEPEPDSDGNKH-----SCKIVFLMALLENLVQEGHRTL 385 Query: 73 VAYHFNSDLARLQKAFPQ---------GRTLDKDPC-TIQEWNEG--KIPLLFAHPASCG 120 V L +Q+ + G+T + ++++ + + G Sbjct: 386 VFAQTLKMLDIIQEEITKRRYSFCRIDGKTKGSERQRIVEDFQTDGCTVSIFLLTSQVGG 445 Query: 121 HGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELV 180 GL L + +V W+ + Q ++R + G R V VY L+ T++E + Sbjct: 446 LGLTLT-AADRVVIVDPAWNPSKDNQSVDR-----AYRIGQLRDVIVYRLMTSGTLEEKI 499 Query: 181 LQRLRTKSTI 190 ++ K + Sbjct: 500 YRKQVFKGGL 509 >gi|222635334|gb|EEE65466.1| hypothetical protein OsJ_20855 [Oryza sativa Japonica Group] Length = 4273 Score = 86.1 bits (212), Expect = 3e-15, Method: Composition-based stats. Identities = 29/157 (18%), Positives = 59/157 (37%), Gaps = 20/157 (12%) Query: 55 KIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKA--FPQGRTLDKDPCT--------IQ 102 K++ L+ ++ K A +++ L ++ + + + L D T I Sbjct: 1262 KLEMLDRLLPKLKATGHRVLLFSTMTRLLDVMEDYLVWKKYKYLRLDGHTSGQERGALID 1321 Query: 103 EWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 ++N + + G G+NLQ + ++ F W+ + Q R + G Sbjct: 1322 KFNNPNSQAFIFLLSIRAGGVGVNLQ-AADTVIIFDTDWNPQVDLQAQAR-----AHRIG 1375 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 K+ V V L T++E V K + + + A Sbjct: 1376 QKKEVLVLRLETVQTVEEQVRASAEHKLGVANQSITA 1412 >gi|4733988|gb|AAD28668.1| putative chromodomain-helicase-DNA-binding protein [Arabidopsis thaliana] Length = 1738 Score = 86.1 bits (212), Expect = 3e-15, Method: Composition-based stats. Identities = 39/231 (16%), Positives = 82/231 (35%), Gaps = 35/231 (15%) Query: 2 KQYHK--FQR---ELYCDLQGENIEAFNSASKTVKCL------QLANGAVYYDEEKHWKE 50 KQY+K +R +L ++G + N + KC + A+ D + K Sbjct: 886 KQYYKWILERNFHDLNKGVRGNQVSLLNIVVELKKCCNHPFLFESADHGYGGDINDNSKL 945 Query: 51 ----VHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQKAF---------PQGRTLD 95 + K+ L+ ++ + +++ L L + G T Sbjct: 946 DKIILSSGKLVILDKLLVRLRETKHRVLIFSQMVRMLDILAEYLSLRGFQFQRLDGSTKA 1005 Query: 96 K-DPCTIQEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIG 152 + + +N + G G+NL + +V F W+ + Q + R Sbjct: 1006 ELRQQAMDHFNAPASDDFCFLLSTRAGGLGINL-ATADTVVIFDSDWNPQNDLQAMSR-- 1062 Query: 153 VTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETI 203 + G + V +Y + +++E +L+R + K + L++ L E Sbjct: 1063 ---AHRIGQQEVVNIYRFVTSKSVEEEILERAKRKMVLDHLVIQKLNAEGR 1110 >gi|171679747|ref|XP_001904820.1| hypothetical protein [Podospora anserina S mat+] gi|170939499|emb|CAP64727.1| unnamed protein product [Podospora anserina S mat+] Length = 1563 Score = 86.1 bits (212), Expect = 3e-15, Method: Composition-based stats. Identities = 25/147 (17%), Positives = 58/147 (39%), Gaps = 19/147 (12%) Query: 44 EEKHWKEVHDEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQKAF---------PQGR 92 +K + K++AL+ ++ + + ++ L L++ G Sbjct: 1423 PDKRLLQYDCGKLQALDKLLRRLHAGGHRALIFTQMTKVLDILEQFLNIHGHKYLRLDGA 1482 Query: 93 TLDKDPCTI-QEWNEG-KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 T + + +N +I S G G+NL G + ++F+ W+ +++ Sbjct: 1483 TKVEQRQILTDRFNHDTRITCFILSTRSGGLGINLT-GADTVIFYDQDWN-----PAMDK 1536 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTID 177 R + G R V +Y L++++T + Sbjct: 1537 QCQDRAHRIGQTRDVHIYRLVSEHTCE 1563 >gi|148666355|gb|EDK98771.1| SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1`, isoform CRA_a [Mus musculus] Length = 1032 Score = 86.1 bits (212), Expect = 3e-15, Method: Composition-based stats. Identities = 31/157 (19%), Positives = 63/157 (40%), Gaps = 19/157 (12%) Query: 51 VHDEKIKALEVIIEKAN--AAPIIVAYHFNSDLARL---------QKAFPQGRT-LDKDP 98 + K +AL I+ + +++ F L L + G+T + + Sbjct: 857 LDSGKFRALGCILSELKQKGDRVVLFSQFTMMLDILEVLLKHHQHRYLRLDGKTQISERI 916 Query: 99 CTIQEWNEG-KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 I E+N I + + G G+NL N+++ + + +Q +R Sbjct: 917 HLIDEFNTDMDIFVFLLSTKAGGLGINLT-SANVVILHDIDCNPYNDKQAEDRC-----H 970 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 + G + V V LI+Q TI+E +L+ + K ++ + Sbjct: 971 RVGQTKEVLVIKLISQGTIEESMLKINQQKLKLEQDM 1007 >gi|207344407|gb|EDZ71563.1| YIL126Wp-like protein [Saccharomyces cerevisiae AWRI1631] Length = 1358 Score = 86.1 bits (212), Expect = 3e-15, Method: Composition-based stats. Identities = 30/147 (20%), Positives = 57/147 (38%), Gaps = 18/147 (12%) Query: 65 KANAAPIIVAYH------FNSDLAR---LQKAFPQGRTLDKDPC-TIQEWNEGKIPLL-- 112 KA+ +++ + D R L+ G T ++ + +N Sbjct: 803 KASGHRVLMFFQMTQVMDIMEDFLRMKDLKYMRLDGSTKTEERTEMLNAFNAPDSDYFCF 862 Query: 113 FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIA 172 + G GLNLQ + ++ F W+ + Q R + G K V + LI Sbjct: 863 LLSTRAGGLGLNLQT-ADTVIIFDTDWNPHQDLQA-----QDRAHRIGQKNEVRILRLIT 916 Query: 173 QNTIDELVLQRLRTKSTIQDLLLNALK 199 ++++E++L+R K I ++ A K Sbjct: 917 TDSVEEVILERAMQKLDIDGKVIQAGK 943 >gi|151943040|gb|EDN61375.1| SNF2-like protein [Saccharomyces cerevisiae YJM789] Length = 1359 Score = 86.1 bits (212), Expect = 3e-15, Method: Composition-based stats. Identities = 30/147 (20%), Positives = 57/147 (38%), Gaps = 18/147 (12%) Query: 65 KANAAPIIVAYH------FNSDLAR---LQKAFPQGRTLDKDPC-TIQEWNEGKIPLL-- 112 KA+ +++ + D R L+ G T ++ + +N Sbjct: 804 KASGHRVLMFFQMTQVMDIMEDFLRMKDLKYMRLDGSTKTEERTEMLNAFNAPDSDYFCF 863 Query: 113 FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIA 172 + G GLNLQ + ++ F W+ + Q R + G K V + LI Sbjct: 864 LLSTRAGGLGLNLQT-ADTVIIFDTDWNPHQDLQA-----QDRAHRIGQKNEVRILRLIT 917 Query: 173 QNTIDELVLQRLRTKSTIQDLLLNALK 199 ++++E++L+R K I ++ A K Sbjct: 918 TDSVEEVILERAMQKLDIDGKVIQAGK 944 >gi|115643432|ref|XP_001197308.1| PREDICTED: similar to Brg1 [Strongylocentrotus purpuratus] gi|115663707|ref|XP_001195839.1| PREDICTED: similar to Brg1 [Strongylocentrotus purpuratus] Length = 1496 Score = 86.1 bits (212), Expect = 3e-15, Method: Composition-based stats. Identities = 31/157 (19%), Positives = 58/157 (36%), Gaps = 20/157 (12%) Query: 55 KIKALEVIIEKAN--AAPIIVAYHFNSDLARLQ-----KAFPQGRTLDKDPCT-----IQ 102 K + L+ I+ K I++ + + L+ + F R +Q Sbjct: 1144 KFELLDRILPKLKALGHRILLFCQMTTLMTILEDFFVYRGFKYLRLDGTTKADDRGILLQ 1203 Query: 103 EWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 +NE P + + G GLNLQ + ++ F W+ + Q R + G Sbjct: 1204 TFNEANCPYFIFMLSTRAGGLGLNLQT-ADTVILFDSDWNPHQDLQA-----QDRAHRIG 1257 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 V V L+ +++E +L R K + ++ A Sbjct: 1258 QVNEVRVLRLMTVQSVEEKILAAARWKMNMDSKIIQA 1294 >gi|68483751|ref|XP_714234.1| hypothetical protein CaO19.607 [Candida albicans SC5314] gi|46435782|gb|EAK95157.1| hypothetical protein CaO19.607 [Candida albicans SC5314] gi|238880196|gb|EEQ43834.1| hypothetical protein CAWG_02085 [Candida albicans WO-1] Length = 1055 Score = 86.1 bits (212), Expect = 3e-15, Method: Composition-based stats. Identities = 27/168 (16%), Positives = 61/168 (36%), Gaps = 25/168 (14%) Query: 53 DEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQK----------------AFPQGRTL 94 K++ L+ ++ ++ ++ L L+K + Sbjct: 612 SGKMQVLKNLLRLWQSENHKTLLFCQTRQMLDILEKFVANLSLINGGDFNYLRMDGSTPI 671 Query: 95 DKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGV 153 K + +N + + + G G+NL G + ++ + W+ Q ER Sbjct: 672 SKRQMLVDAFNQDPDMHVFLLTTKVGGLGVNLT-GADRVIIYDPDWNPSTDIQARERAW- 729 Query: 154 TRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 + G KR + +Y L+ +I+E + R K+ + + +L K+ Sbjct: 730 ----RLGQKRDITIYRLMTTGSIEEKIYHRQIFKTFLTNKILKDPKQR 773 >gi|242015095|ref|XP_002428209.1| Chromo domain protein, putative [Pediculus humanus corporis] gi|212512770|gb|EEB15471.1| Chromo domain protein, putative [Pediculus humanus corporis] Length = 1795 Score = 86.1 bits (212), Expect = 3e-15, Method: Composition-based stats. Identities = 22/142 (15%), Positives = 51/142 (35%), Gaps = 18/142 (12%) Query: 69 APIIVAYHFNSDLARLQKAF---------PQGRTLDK-DPCTIQEWNEGKIP--LLFAHP 116 +++ L L + G + + +N Sbjct: 758 HRVLIFSQMVRMLDILAEYLQLRRFQFQRLDGSIKGEIRKQALDHFNAENSMDFCFLLST 817 Query: 117 ASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTI 176 + G G+NL + ++ F W+ + Q R + G K V +Y L+ +N++ Sbjct: 818 RAGGLGINL-ATADTVIIFDSDWNPQNDLQAQAR-----AHRIGQKNQVNIYRLVTKNSV 871 Query: 177 DELVLQRLRTKSTIQDLLLNAL 198 +E +++R + K + L++ + Sbjct: 872 EEEIIERAKKKMVLDHLVIQRM 893 >gi|156544311|ref|XP_001607169.1| PREDICTED: similar to helicase [Nasonia vitripennis] Length = 1587 Score = 86.1 bits (212), Expect = 3e-15, Method: Composition-based stats. Identities = 31/160 (19%), Positives = 61/160 (38%), Gaps = 20/160 (12%) Query: 52 HDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARL---------QKAFPQGRTLDKDPCT 100 K + L+ I+ K A +++ + + + G T +D Sbjct: 1081 ASGKFELLDRILPKLKATGHRVLLFCQMTQLMTIMEDYLNWRGFRYLRLDGTTKAEDRGD 1140 Query: 101 I-QEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 + + +N+ L + G GLNLQ + ++ F W+ + Q R Sbjct: 1141 LLKRFNDPSSDYFLFILSTRAGGLGLNLQ-AADTVIIFDSDWNPHQDLQA-----QDRAH 1194 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + G K V V L+ N+++E +L R K + + ++ A Sbjct: 1195 RIGQKNEVRVLRLMTVNSVEERILAAARYKLNMDEKVIQA 1234 >gi|119571321|gb|EAW50936.1| chromodomain helicase DNA binding protein 1-like, isoform CRA_a [Homo sapiens] Length = 897 Score = 86.1 bits (212), Expect = 3e-15, Method: Composition-based stats. Identities = 34/216 (15%), Positives = 79/216 (36%), Gaps = 33/216 (15%) Query: 1 MKQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYD-------EEKHWKEVHD 53 MK F+ E + ++ N S+ KC + +D E Sbjct: 295 MKDLDAFENET-----AKKVKLQNILSQLRKC---VDHPYLFDGVEPEPFEVGDHLTEAS 346 Query: 54 EKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAFP---------QGRTLDKDPC-TI 101 K+ L+ ++ + +++ L LQ G ++ I Sbjct: 347 GKLHLLDKLLAFLYSGGHRVLLFSQMTQMLDILQDYMDYRGYSYERVDGSVRGEERHLAI 406 Query: 102 QEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGF 161 + + + I + + G G+NL + ++F ++ + Q R + G Sbjct: 407 KNFGQQPIFVFLLSTRAGGVGMNLT-AADTVIFVDSDFNPQNDLQAAAR-----AHRIGQ 460 Query: 162 KRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 ++V V LI ++T++E+V ++ +K + ++++ Sbjct: 461 NKSVKVIRLIGRDTVEEIVYRKAASKLQLTNMIIEG 496 >gi|149029137|gb|EDL84422.1| similar to putative repair and recombination helicase RAD26L (predicted), isoform CRA_a [Rattus norvegicus] Length = 708 Score = 86.1 bits (212), Expect = 3e-15, Method: Composition-based stats. Identities = 31/152 (20%), Positives = 62/152 (40%), Gaps = 19/152 (12%) Query: 53 DEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQK---------AFPQGRTLDKDP-CT 100 K+K L+ ++ + + +++ L LQ+ G T ++ Sbjct: 514 SGKMKVLDQLLNHFRKHRDKVLLFSFSTKLLDVLQQYCMASGLDYRRLDGSTKSEERLKI 573 Query: 101 IQEWNEG-KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQA 159 ++E+N + + + G GLN G N+++ F W+ Q I+R + Sbjct: 574 VKEFNSSQDVNICLVSTMAGGLGLNF-IGANVVILFDPTWNPANDLQAIDR-----AYRI 627 Query: 160 GFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQ 191 G R V V+ LI+ T++E++ R K + Sbjct: 628 GQCRDVKVFRLISLGTVEEIMYLRQVYKQQLH 659 >gi|414117|emb|CAA51407.1| HBRM [Homo sapiens] Length = 1586 Score = 86.1 bits (212), Expect = 3e-15, Method: Composition-based stats. Identities = 31/160 (19%), Positives = 63/160 (39%), Gaps = 20/160 (12%) Query: 52 HDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAF---------PQGRTLDKDPCT 100 K + L+ I+ +A +++ S + ++ F G T +D Sbjct: 1044 ASGKFELLDRILPKLRATNHRVLLFCQMTSLMTIMEDYFAFRNFLYLRLDGTTKSEDRAA 1103 Query: 101 I-QEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 + +++NE + + + G GLNLQ + +V F W+ + Q R Sbjct: 1104 LLKKFNEPGSQYFIFLLSTRAGGLGLNLQ-AADTVVIFDSDWNPHQDLQA-----QDRAH 1157 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + G + V V L N+++E +L + K + ++ A Sbjct: 1158 RIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQA 1197 >gi|28629217|gb|AAO49505.1| ALC1 [Homo sapiens] Length = 897 Score = 86.1 bits (212), Expect = 3e-15, Method: Composition-based stats. Identities = 34/216 (15%), Positives = 79/216 (36%), Gaps = 33/216 (15%) Query: 1 MKQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYD-------EEKHWKEVHD 53 MK F+ E + ++ N S+ KC + +D E Sbjct: 295 MKDLDAFENET-----AKKVKLQNILSQLRKC---VDHPYLFDGVEPEPFEVGDHLTEAS 346 Query: 54 EKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAFP---------QGRTLDKDPC-TI 101 K+ L+ ++ + +++ L LQ G ++ I Sbjct: 347 GKLHLLDKLLAFLYSGGHRVLLFSQMTQMLDILQDYMDYRGYSYERVDGSVRGEERHLAI 406 Query: 102 QEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGF 161 + + + I + + G G+NL + ++F ++ + Q R + G Sbjct: 407 KNFGQQPIFVFLLSTRAGGVGMNLT-AADTVIFVDSDFNPQNDLQAAAR-----AHRIGQ 460 Query: 162 KRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 ++V V LI ++T++E+V ++ +K + ++++ Sbjct: 461 NKSVKVIRLIGRDTVEEIVYRKAASKLQLTNMIIEG 496 >gi|28175792|gb|AAH43501.1| Similar to RIKEN cDNA 4432404A22 gene [Homo sapiens] Length = 890 Score = 86.1 bits (212), Expect = 3e-15, Method: Composition-based stats. Identities = 34/216 (15%), Positives = 79/216 (36%), Gaps = 33/216 (15%) Query: 1 MKQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYD-------EEKHWKEVHD 53 MK F+ E + ++ N S+ KC + +D E Sbjct: 288 MKDLDAFENET-----AKKVKLQNILSQLRKC---VDHPYLFDGVEPEPFEVGDHLTEAS 339 Query: 54 EKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAFP---------QGRTLDKDPC-TI 101 K+ L+ ++ + +++ L LQ G ++ I Sbjct: 340 GKLHLLDKLLAFLYSGGHRVLLFSQMTQMLDILQDYMDYRGYSYERVDGSVRGEERHLAI 399 Query: 102 QEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGF 161 + + + I + + G G+NL + ++F ++ + Q R + G Sbjct: 400 KNFGQQPIFVFLLSTRAGGVGMNLT-AADTVIFVDSDFNPQNDLQAAAR-----AHRIGQ 453 Query: 162 KRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 ++V V LI ++T++E+V ++ +K + ++++ Sbjct: 454 NKSVKVIRLIGRDTVEEIVYRKAASKLQLTNMIIEG 489 >gi|52076407|dbj|BAD45237.1| putative STH1 protein [Oryza sativa Japonica Group] Length = 3389 Score = 86.1 bits (212), Expect = 3e-15, Method: Composition-based stats. Identities = 29/157 (18%), Positives = 59/157 (37%), Gaps = 20/157 (12%) Query: 55 KIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKA--FPQGRTLDKDPCT--------IQ 102 K++ L+ ++ K A +++ L ++ + + + L D T I Sbjct: 1336 KLEMLDRLLPKLKATGHRVLLFSTMTRLLDVMEDYLVWKKYKYLRLDGHTSGQERGALID 1395 Query: 103 EWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 ++N + + G G+NLQ + ++ F W+ + Q R + G Sbjct: 1396 KFNNPNSQAFIFLLSIRAGGVGVNLQ-AADTVIIFDTDWNPQVDLQAQAR-----AHRIG 1449 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 K+ V V L T++E V K + + + A Sbjct: 1450 QKKEVLVLRLETVQTVEEQVRASAEHKLGVANQSITA 1486 >gi|296189845|ref|XP_002806533.1| PREDICTED: LOW QUALITY PROTEIN: probable global transcription activator SNF2L2-like [Callithrix jacchus] Length = 1589 Score = 86.1 bits (212), Expect = 3e-15, Method: Composition-based stats. Identities = 31/160 (19%), Positives = 63/160 (39%), Gaps = 20/160 (12%) Query: 52 HDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAF---------PQGRTLDKDPCT 100 K + L+ I+ +A +++ S + ++ F G T +D Sbjct: 1047 ASGKFELLDRILPKLRATNHRVLLFCQMTSLMTIMEDYFAFRNFLYLRLDGTTKSEDRAA 1106 Query: 101 I-QEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 + +++NE + + + G GLNLQ + +V F W+ + Q R Sbjct: 1107 LLKKFNEPGSQYFIFLLSTRAGGLGLNLQ-AADTVVIFDSDWNPHQDLQA-----QDRAH 1160 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + G + V V L N+++E +L + K + ++ A Sbjct: 1161 RIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQA 1200 >gi|281345379|gb|EFB20963.1| hypothetical protein PANDA_019836 [Ailuropoda melanoleuca] Length = 834 Score = 86.1 bits (212), Expect = 3e-15, Method: Composition-based stats. Identities = 34/216 (15%), Positives = 80/216 (37%), Gaps = 35/216 (16%) Query: 1 MKQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDE--------EKHWKEVH 52 MK F+ E+ + ++ N S+ KC + +D H E Sbjct: 253 MKDLDAFENEM-----AKKVKLQNVLSQLRKC---VDHPYLFDGVEPEPFEIGDHLIE-A 303 Query: 53 DEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAFP---------QGRTLDKDPC-T 100 K+ L+ ++ + +++ L LQ G ++ Sbjct: 304 SGKLYLLDKLLAFLYSRGHRVLLFSQMTQMLDILQDYMDYRGYSYERVDGSVRGEERHLA 363 Query: 101 IQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 I+ + + + + + G G+NL + ++F ++ + Q R + G Sbjct: 364 IKNFGQQPVFIFLLSTRAGGVGMNLT-AADTVIFVDSDFNPQNDLQAAAR-----AHRIG 417 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 ++V V LI ++T++E+V ++ +K + + ++ Sbjct: 418 QNKSVKVIRLIGRDTVEEIVYRKAASKLQLTNTIIE 453 >gi|281200733|gb|EFA74951.1| SNF2-related domain-containing protein [Polysphondylium pallidum PN500] Length = 1336 Score = 86.1 bits (212), Expect = 3e-15, Method: Composition-based stats. Identities = 25/150 (16%), Positives = 53/150 (35%), Gaps = 19/150 (12%) Query: 67 NAAPIIVAYHFNSDLARLQKAFPQGRTL-----------DKDPCTIQEWN-EGKIPLLFA 114 +++ L +++ + + I E+N + +I Sbjct: 898 EGHRLLIFSQSVKMLNAIEQLLNYLKLSFLRIDGSISSSKERQKRIDEFNGDREIFCFLL 957 Query: 115 HPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQN 174 GLN+ + +V F W+ ++ V R + G + V VY L+ Sbjct: 958 TIQVGALGLNMT-SADRVVIFDPSWN------TVDNQAVDRVYRIGQTKDVVVYRLMCCG 1010 Query: 175 TIDELVLQRLRTKSTIQDLLLNALKKETIH 204 TI+E + ++ K + +LN K + + Sbjct: 1011 TIEEKIYRKQVFKGALMKTMLNQGKGQHRY 1040 >gi|115450111|ref|NP_001048656.1| Os03g0101700 [Oryza sativa Japonica Group] gi|108705687|gb|ABF93482.1| SNF2P, putative, expressed [Oryza sativa Japonica Group] gi|113547127|dbj|BAF10570.1| Os03g0101700 [Oryza sativa Japonica Group] gi|215694686|dbj|BAG89877.1| unnamed protein product [Oryza sativa Japonica Group] Length = 842 Score = 86.1 bits (212), Expect = 3e-15, Method: Composition-based stats. Identities = 31/176 (17%), Positives = 71/176 (40%), Gaps = 31/176 (17%) Query: 44 EEKHWKEVHDEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQ---------------- 85 E +H + K+ L++I++K + +++ L LQ Sbjct: 309 EGEHLVQ-ASGKLVMLDLILKKLHEVGHRVLLFAQMTQTLDILQDFLELRQYTYERLDGS 367 Query: 86 ----KAFPQGRTLDKDPC--TIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWW 139 + F ++ P +++ N+ + + G GLNL G + ++F+ W Sbjct: 368 VRAEERFAAIKSFSSQPTKGVVRDDNQSGAFVFMISTRAGGVGLNL-IGADTVIFYEQDW 426 Query: 140 DLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 + + +Q ++R + G V L++Q TI+E++++R K + ++ Sbjct: 427 NPQADKQALQR-----AHRIGQLNNVLSINLVSQRTIEEVIMRRAERKLKLSHSVI 477 >gi|73946639|ref|XP_860267.1| PREDICTED: similar to SWI/SNF-related matrix-associated actin-dependent regulator of chromatin a2 isoform b isoform 18 [Canis familiaris] Length = 1555 Score = 86.1 bits (212), Expect = 3e-15, Method: Composition-based stats. Identities = 31/160 (19%), Positives = 63/160 (39%), Gaps = 20/160 (12%) Query: 52 HDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAF---------PQGRTLDKDPCT 100 K + L+ I+ +A +++ S + ++ F G T +D Sbjct: 1031 ASGKFELLDRILPKLRATNHRVLLFCQMTSLMTIMEDYFAFRNFLYLRLDGTTKSEDRAA 1090 Query: 101 I-QEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 + +++NE + + + G GLNLQ + +V F W+ + Q R Sbjct: 1091 LLKKFNEPGSQYFIFLLSTRAGGLGLNLQ-AADTVVIFDSDWNPHQDLQA-----QDRAH 1144 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + G + V V L N+++E +L + K + ++ A Sbjct: 1145 RIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQA 1184 >gi|73946677|ref|XP_860893.1| PREDICTED: similar to SWI/SNF-related matrix-associated actin-dependent regulator of chromatin a2 isoform b isoform 35 [Canis familiaris] Length = 1584 Score = 86.1 bits (212), Expect = 3e-15, Method: Composition-based stats. Identities = 31/160 (19%), Positives = 63/160 (39%), Gaps = 20/160 (12%) Query: 52 HDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAF---------PQGRTLDKDPCT 100 K + L+ I+ +A +++ S + ++ F G T +D Sbjct: 1060 ASGKFELLDRILPKLRATNHRVLLFCQMTSLMTIMEDYFAFRNFLYLRLDGTTKSEDRAA 1119 Query: 101 I-QEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 + +++NE + + + G GLNLQ + +V F W+ + Q R Sbjct: 1120 LLKKFNEPGSQYFIFLLSTRAGGLGLNLQ-AADTVVIFDSDWNPHQDLQA-----QDRAH 1173 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + G + V V L N+++E +L + K + ++ A Sbjct: 1174 RIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQA 1213 >gi|322703872|gb|EFY95474.1| SWI/SNF family DNA-dependent ATPase Ris1, putative [Metarhizium anisopliae ARSEF 23] Length = 1074 Score = 86.1 bits (212), Expect = 3e-15, Method: Composition-based stats. Identities = 28/162 (17%), Positives = 61/162 (37%), Gaps = 21/162 (12%) Query: 56 IKALEVIIEKANAAPIIVAYHFNSDLARLQ-----KAFPQGRTL-------DKDPCTIQE 103 +K L I E I+ + L L+ + FP D+ ++ Sbjct: 907 MKLLREIRE--TGEKTIIFSQWTLLLDLLEVAMWHEQFPDKPVRYDGSMTGDERSNAAKD 964 Query: 104 WNEG-KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFK 162 + + + ++ + GLNL + ++ +W+ Q I+R + G + Sbjct: 965 FRDRSECNVMLVSLRAGNAGLNLT-AASRVIIMDPFWNPYIEMQAIDR-----TYRIGQQ 1018 Query: 163 RAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIH 204 + V VY ++ Q T+++ ++ K I + L+ + I Sbjct: 1019 KEVEVYRILTQETVEDRIVALQNKKKEIVEAALDETESMKIG 1060 >gi|195398205|ref|XP_002057713.1| GJ18281 [Drosophila virilis] gi|194141367|gb|EDW57786.1| GJ18281 [Drosophila virilis] Length = 1924 Score = 86.1 bits (212), Expect = 3e-15, Method: Composition-based stats. Identities = 30/173 (17%), Positives = 63/173 (36%), Gaps = 20/173 (11%) Query: 40 VYYDEEKHWKEVHDEKIKALEVIIEKAN--AAPIIVAYHFNSDLA----RLQKAFPQGRT 93 + DE K+ L+ ++ + +++ L LQK + Sbjct: 847 LQQDEALQMLLKGSGKLVLLDKLLCRLKETGHRVLIFSQMVRMLDVLADYLQKRHFSFQR 906 Query: 94 LDK------DPCTIQEWN-EGKIPL-LFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQ 145 LD + +N EG + G G+NL + ++ F W+ + Sbjct: 907 LDGSIKGEMRRQALDHFNAEGSQDFCFLLSTRAGGLGINL-ATADTVIIFDSDWNPQNDL 965 Query: 146 QMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNAL 198 Q R + G K V +Y L+ +++E +++R + K + L++ + Sbjct: 966 QAQAR-----AHRIGQKNQVNIYRLVTARSVEEQIVERAKQKMVLDHLVIQRM 1013 >gi|302913005|ref|XP_003050823.1| hypothetical protein NECHADRAFT_80466 [Nectria haematococca mpVI 77-13-4] gi|256731761|gb|EEU45110.1| hypothetical protein NECHADRAFT_80466 [Nectria haematococca mpVI 77-13-4] Length = 1514 Score = 86.1 bits (212), Expect = 3e-15, Method: Composition-based stats. Identities = 26/166 (15%), Positives = 64/166 (38%), Gaps = 20/166 (12%) Query: 52 HDEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQKAFP----QGRTLDKD------PC 99 K+ L+V++ K +++ F + L ++ R LD Sbjct: 1082 ASAKLLLLQVMLPKLQEKGHRVLIFSQFLNQLDIIEDFLGGLGYDYRRLDGSIGSLEKQR 1141 Query: 100 TIQEWNEGKIPLL--FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 I +N P+ + G G+NL + ++ ++ + Q + R Sbjct: 1142 RIDAFNAPGSPIFAFLLSTRAGGVGINL-ATADTVIILDPDFNPHQDIQALSR-----AH 1195 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETI 203 + G K+ V + L+ ++++E ++Q + K + L+ ++ + + Sbjct: 1196 RIGQKKKVLCFQLMTVDSVEERIMQIGKKKMALDHALIESMDDDEL 1241 >gi|157127434|ref|XP_001654978.1| chromodomain helicase DNA binding protein [Aedes aegypti] gi|108882413|gb|EAT46638.1| chromodomain helicase DNA binding protein [Aedes aegypti] Length = 4467 Score = 86.1 bits (212), Expect = 3e-15, Method: Composition-based stats. Identities = 23/146 (15%), Positives = 53/146 (36%), Gaps = 18/146 (12%) Query: 65 KANAAPIIVAYHFNSDLARLQKAFP---------QGRTL-DKDPCTIQEWNEGKIP--LL 112 KAN +++ L L+ GR + I +++ + Sbjct: 2264 KANGHRVLIFSQMVRCLDILEDYLIYRKYPFERIDGRIRGNLRQAAIDRYSKPDSDRFVF 2323 Query: 113 FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIA 172 + G G+NL + ++ + W+ + Q R + G ++ V +Y L+ Sbjct: 2324 LLCTKAGGLGINLT-AADTVIIYDSDWNPQNDLQAQARC-----HRIGQQKMVKIYRLLC 2377 Query: 173 QNTIDELVLQRLRTKSTIQDLLLNAL 198 +NT + + + K + +L ++ Sbjct: 2378 RNTYEREMFDKASLKLGLDKAILQSM 2403 >gi|241959152|ref|XP_002422295.1| ATP-dependent helicase, putative; DNA repair and recombination protein rad26 homologue, putative [Candida dubliniensis CD36] gi|223645640|emb|CAX40300.1| ATP-dependent helicase, putative [Candida dubliniensis CD36] Length = 1054 Score = 85.8 bits (211), Expect = 3e-15, Method: Composition-based stats. Identities = 27/168 (16%), Positives = 60/168 (35%), Gaps = 25/168 (14%) Query: 53 DEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQK----------------AFPQGRTL 94 K++ L+ ++ + ++ L L+K + Sbjct: 615 SGKMQVLKNLLRLWQHENHKTLLFCQTRQMLDILEKFVANLSLINGGDFKYLRMDGSTPI 674 Query: 95 DKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGV 153 K + +N + + + G G+NL G + ++ + W+ Q ER Sbjct: 675 SKRQMLVDAFNQDPDMHVFLLTTKVGGLGVNLT-GADRVIIYDPDWNPSTDIQARERAW- 732 Query: 154 TRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 + G KR + +Y L+ +I+E + R K+ + + +L K+ Sbjct: 733 ----RLGQKRDITIYRLMTTGSIEEKIYHRQIFKTFLTNKILKDPKQR 776 >gi|242208372|ref|XP_002470037.1| predicted protein [Postia placenta Mad-698-R] gi|220730937|gb|EED84787.1| predicted protein [Postia placenta Mad-698-R] Length = 1497 Score = 85.8 bits (211), Expect = 3e-15, Method: Composition-based stats. Identities = 39/235 (16%), Positives = 83/235 (35%), Gaps = 45/235 (19%) Query: 2 KQYHKFQR-ELYCDLQGENIEAFNSASKTVKCLQL----------------ANGAVYYDE 44 + Y + ++ ++ D + ++ + + +QL N + D+ Sbjct: 868 QLYKQMKKYKMIADGKDTKGKSGGVKGLSNELMQLRKICQHPFLFESVEDRINPSGIVDD 927 Query: 45 EKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFP---------QGRT 93 + KI+ L I+ K A +++ + + ++ G T Sbjct: 928 K---IVRASGKIELLSRILPKFFATDHRVLIFFQMTKVMDIMEDFLKFMGWKYLRLDGGT 984 Query: 94 LDKDPCT-IQEWNEGK--IPLLFAHPASCGHGLNLQYGGNILVF------FSLWWDLEEH 144 +D +Q +N I + + G GLNLQ +++ F W+ Sbjct: 985 KTEDRAGHVQLFNAPDSDIRVFILSTRAGGLGLNLQTADTVIMNNLIDNSFDSDWNPHAD 1044 Query: 145 QQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 Q R + G + V + I + +++E + QR R K I D ++ A + Sbjct: 1045 LQA-----QDRAHRIGQTKVVRILRFITEKSVEESMFQRARYKLDIDDKVIQAGR 1094 >gi|218193665|gb|EEC76092.1| hypothetical protein OsI_13335 [Oryza sativa Indica Group] Length = 850 Score = 85.8 bits (211), Expect = 3e-15, Method: Composition-based stats. Identities = 20/142 (14%), Positives = 54/142 (38%), Gaps = 18/142 (12%) Query: 66 ANAAPIIVAYHFNSDLARLQK----------AFPQGRTLDKDPCTIQEWN--EGKIPLLF 113 A +++ + L ++ L++ I E+N + + Sbjct: 624 ARKHKVLIFSQWTKVLDIIEYYLETKGLQVCRIDGSVKLEERRRQIAEFNDLNSSMNIFI 683 Query: 114 AHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQ 173 + G G+NL + + + W+ + Q ++R + G R V VY L Sbjct: 684 LSTRAGGLGINLT-SADTCILYDSDWNPQMDLQAMDRC-----HRIGQTRPVHVYRLATS 737 Query: 174 NTIDELVLQRLRTKSTIQDLLL 195 ++++ ++++ K ++ +++ Sbjct: 738 HSVEGRIIKKAFGKLRLEHVVI 759 >gi|145348183|ref|XP_001418535.1| predicted protein [Ostreococcus lucimarinus CCE9901] gi|144578764|gb|ABO96828.1| predicted protein [Ostreococcus lucimarinus CCE9901] Length = 1326 Score = 85.8 bits (211), Expect = 3e-15, Method: Composition-based stats. Identities = 31/229 (13%), Positives = 79/229 (34%), Gaps = 43/229 (18%) Query: 4 YHKF-QRELYCDLQGENIEAFNSA-SKTVKCLQLANGAVYYDEEKHW---------KEVH 52 Y + +++ L+G +++ + +++ ++ N D + E Sbjct: 546 YRALYENQIHVLLEGSKVKSVPQLRNLSMELRKVCNHPFLCDGLEEDYTNKRLAACAEKG 605 Query: 53 DEKIKALEVIIEKA---------------NAAPIIVAYHFNSDLARLQ----------KA 87 D+ AL++++E + + +++ F L +Q + Sbjct: 606 DQPPNALQLLVEGSGKMGLLAKLLAKLKRDGHKVLIFSQFTMVLDLIQDFMNASGHETER 665 Query: 88 FPQGRTLDKDPCTIQEWNE-GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 + + I +N G + G G+ L + + F W+ + Q Sbjct: 666 LDGNTSAENRQAGIDRFNTPGAGFAYLLSTRAGGMGITLT-SADTAIIFDSDWNPQNDLQ 724 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 + R + G + V VY I ++T ++ + + K + + +L Sbjct: 725 AMARC-----HRIGQTKEVKVYRFITKDTYEQSLFETASRKYGLDEAIL 768 >gi|116235007|dbj|BAF34943.1| chromatin remodeling factor DDM1b [Oryza sativa Japonica Group] gi|116235011|dbj|BAF34945.1| chromatin remodeling factor DDM1b [Oryza sativa Japonica Group] gi|222625697|gb|EEE59829.1| hypothetical protein OsJ_12393 [Oryza sativa Japonica Group] Length = 849 Score = 85.8 bits (211), Expect = 3e-15, Method: Composition-based stats. Identities = 20/142 (14%), Positives = 54/142 (38%), Gaps = 18/142 (12%) Query: 66 ANAAPIIVAYHFNSDLARLQK----------AFPQGRTLDKDPCTIQEWN--EGKIPLLF 113 A +++ + L ++ L++ I E+N + + Sbjct: 623 ARKHKVLIFSQWTKVLDIIEYYLETKGLQVCRIDGSVKLEERRRQIAEFNDLNSSMNIFI 682 Query: 114 AHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQ 173 + G G+NL + + + W+ + Q ++R + G R V VY L Sbjct: 683 LSTRAGGLGINLT-SADTCILYDSDWNPQMDLQAMDRC-----HRIGQTRPVHVYRLATS 736 Query: 174 NTIDELVLQRLRTKSTIQDLLL 195 ++++ ++++ K ++ +++ Sbjct: 737 HSVEGRIIKKAFGKLRLEHVVI 758 >gi|302789546|ref|XP_002976541.1| hypothetical protein SELMODRAFT_105336 [Selaginella moellendorffii] gi|300155579|gb|EFJ22210.1| hypothetical protein SELMODRAFT_105336 [Selaginella moellendorffii] Length = 788 Score = 85.8 bits (211), Expect = 3e-15, Method: Composition-based stats. Identities = 35/190 (18%), Positives = 66/190 (34%), Gaps = 27/190 (14%) Query: 15 LQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKA--NAAPII 72 L +I A + K+ LA D KH KI L ++E + Sbjct: 399 LDSTDIAAAEAMRKS--LAGLAEPEPDSDGNKH-----SCKIVFLMALLENLVQEGHRTL 451 Query: 73 VAYHFNSDLARLQKAFPQ---------GRTLDKDPC-TIQEWNEG--KIPLLFAHPASCG 120 V L +Q+ + G+T + ++++ + + G Sbjct: 452 VFAQTLKMLDIIQEEITKRRYSFCRIDGKTKGSERQRIVEDFQTDGCTVSIFLLTSQVGG 511 Query: 121 HGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELV 180 GL L + +V W+ + Q ++R + G R V VY L+ T++E + Sbjct: 512 LGLTLT-AADRVVIVDPAWNPSKDNQSVDR-----AYRIGQLRDVIVYRLMTSGTLEEKI 565 Query: 181 LQRLRTKSTI 190 ++ K + Sbjct: 566 YRKQVFKGGL 575 >gi|297663858|ref|XP_002810380.1| PREDICTED: chromodomain-helicase-DNA-binding protein 1-like isoform 2 [Pongo abelii] Length = 696 Score = 85.8 bits (211), Expect = 3e-15, Method: Composition-based stats. Identities = 35/217 (16%), Positives = 81/217 (37%), Gaps = 35/217 (16%) Query: 1 MKQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDE--------EKHWKEVH 52 MK F+ E+ + ++ N S+ KC + +D H E Sbjct: 93 MKDLDAFENEM-----AKKVKLQNILSQLRKC---VDHPYLFDGVEPEPFEVGDHLIE-A 143 Query: 53 DEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAFP---------QGRTLDKDPC-T 100 K+ L+ ++ + +++ L LQ G ++ Sbjct: 144 SGKLHLLDKLLAFLYSGGHRVLLFSQMTQMLDILQDYMDYRGYSYERVDGSVRGEERHLA 203 Query: 101 IQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 I+ + + I + + G G+NL + ++F ++ + Q R + G Sbjct: 204 IKNFGQQPIFVFLLSTRAGGVGMNLT-AADTVIFVDSDFNPQNDLQAAAR-----AHRIG 257 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 ++V V LI ++T++E+V ++ +K + ++++ Sbjct: 258 QNKSVKVIRLIGRDTVEEIVYRKAASKLQLTNMIIEG 294 >gi|47211143|emb|CAF96563.1| unnamed protein product [Tetraodon nigroviridis] Length = 1919 Score = 85.8 bits (211), Expect = 3e-15, Method: Composition-based stats. Identities = 21/97 (21%), Positives = 43/97 (44%), Gaps = 9/97 (9%) Query: 112 LFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLI 171 + G G+NL + +V F W+ + Q R + G KR V +Y L+ Sbjct: 887 FLLSTRAGGLGINL-ASADTVVIFDSDWNPQNDLQAQAR-----AHRIGQKRQVNIYRLV 940 Query: 172 AQNTIDELVLQRLRTKSTIQDLL---LNALKKETIHV 205 + +++E +++R + K + L+ ++ K +H Sbjct: 941 TKGSVEEDIIERAKKKMVLDHLVIQRMDTTGKTVLHT 977 >gi|189208001|ref|XP_001940334.1| DNA repair protein rad5 [Pyrenophora tritici-repentis Pt-1C-BFP] gi|187976427|gb|EDU43053.1| DNA repair protein rad5 [Pyrenophora tritici-repentis Pt-1C-BFP] Length = 742 Score = 85.8 bits (211), Expect = 3e-15, Method: Composition-based stats. Identities = 29/163 (17%), Positives = 64/163 (39%), Gaps = 18/163 (11%) Query: 54 EKIKAL-EVIIEKANAAPIIVAYHFNSDLARLQK----------AFPQGRTLDKDPCTIQ 102 KIKAL ++++ IV + S L +QK F + ++ Sbjct: 573 TKIKALVSDLLKQPKGTKSIVFSFWTSTLDLVQKGLSGSFITYTRFDGTTSQSNRSTALK 632 Query: 103 EW-NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGF 161 ++ + I ++ + GL++ + W+ +Q + R+ + G Sbjct: 633 DFRQDPSISVILMTISCSAVGLDITAASRAYIL-EPQWNPTVEEQALARV-----HRMGQ 686 Query: 162 KRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIH 204 + V + +NT +E V++ K + +LLL++ ++ H Sbjct: 687 TKPVTTIRFVMENTFEERVVETQERKRRLAELLLSSEEQVAEH 729 >gi|145359958|ref|NP_178970.3| CHR5 (chromatin remodeling 5); ATP binding / DNA binding / chromatin binding / helicase/ nucleic acid binding [Arabidopsis thaliana] gi|330251136|gb|AEC06230.1| chromatin remodeling 5 [Arabidopsis thaliana] Length = 1724 Score = 85.8 bits (211), Expect = 3e-15, Method: Composition-based stats. Identities = 39/231 (16%), Positives = 82/231 (35%), Gaps = 35/231 (15%) Query: 2 KQYHK--FQR---ELYCDLQGENIEAFNSASKTVKCL------QLANGAVYYDEEKHWKE 50 KQY+K +R +L ++G + N + KC + A+ D + K Sbjct: 872 KQYYKWILERNFHDLNKGVRGNQVSLLNIVVELKKCCNHPFLFESADHGYGGDINDNSKL 931 Query: 51 ----VHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQKAF---------PQGRTLD 95 + K+ L+ ++ + +++ L L + G T Sbjct: 932 DKIILSSGKLVILDKLLVRLRETKHRVLIFSQMVRMLDILAEYLSLRGFQFQRLDGSTKA 991 Query: 96 K-DPCTIQEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIG 152 + + +N + G G+NL + +V F W+ + Q + R Sbjct: 992 ELRQQAMDHFNAPASDDFCFLLSTRAGGLGINL-ATADTVVIFDSDWNPQNDLQAMSR-- 1048 Query: 153 VTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETI 203 + G + V +Y + +++E +L+R + K + L++ L E Sbjct: 1049 ---AHRIGQQEVVNIYRFVTSKSVEEEILERAKRKMVLDHLVIQKLNAEGR 1096 >gi|48255900|ref|NP_003061.3| probable global transcription activator SNF2L2 isoform a [Homo sapiens] gi|212276472|sp|P51531|SMCA2_HUMAN RecName: Full=Probable global transcription activator SNF2L2; AltName: Full=ATP-dependent helicase SMARCA2; AltName: Full=BRG1-associated factor 190B; Short=BAF190B; AltName: Full=Protein brahma homolog; Short=hBRM; AltName: Full=SNF2-alpha; AltName: Full=SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2 gi|55957477|emb|CAI14599.1| SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2 [Homo sapiens] gi|55958982|emb|CAI12967.1| SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2 [Homo sapiens] gi|119579215|gb|EAW58811.1| SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, isoform CRA_a [Homo sapiens] gi|119579218|gb|EAW58814.1| SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, isoform CRA_a [Homo sapiens] Length = 1590 Score = 85.8 bits (211), Expect = 3e-15, Method: Composition-based stats. Identities = 31/160 (19%), Positives = 63/160 (39%), Gaps = 20/160 (12%) Query: 52 HDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAF---------PQGRTLDKDPCT 100 K + L+ I+ +A +++ S + ++ F G T +D Sbjct: 1048 ASGKFELLDRILPKLRATNHRVLLFCQMTSLMTIMEDYFAFRNFLYLRLDGTTKSEDRAA 1107 Query: 101 I-QEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 + +++NE + + + G GLNLQ + +V F W+ + Q R Sbjct: 1108 LLKKFNEPGSQYFIFLLSTRAGGLGLNLQ-AADTVVIFDSDWNPHQDLQA-----QDRAH 1161 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + G + V V L N+++E +L + K + ++ A Sbjct: 1162 RIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQA 1201 >gi|85540719|sp|Q7S1P9|RAD5_NEUCR RecName: Full=DNA repair protein rad-5 Length = 1222 Score = 85.8 bits (211), Expect = 3e-15, Method: Composition-based stats. Identities = 32/159 (20%), Positives = 54/159 (33%), Gaps = 21/159 (13%) Query: 51 VHDEKIKALEV----IIEKANAAPIIVAYHFNSDLARLQKAF---------PQGRTLDKD 97 KI AL + ++ +V F S L+ + A G K Sbjct: 1047 DSSAKIVALISHLRTLRQEHPKMKSLVISQFTSFLSLISSALTRHKISFLRLDGSMSQKA 1106 Query: 98 PCTI--QEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTR 155 + + + K +L + G GLNL + WW Q I+R+ Sbjct: 1107 RAAVLTEFQSTNKFCVLLLSLKAGGVGLNLT-SAKRVYMMDPWWSFAVEAQAIDRV---- 1161 Query: 156 QRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 + G + V VY I + +++ +L+ K I L Sbjct: 1162 -HRMGQEDEVRVYRFIVKQSVEMRMLRVQERKKFIATSL 1199 >gi|85090635|ref|XP_958511.1| DNA repair protein RAD5 [Neurospora crassa OR74A] gi|28919880|gb|EAA29275.1| DNA repair protein RAD5 [Neurospora crassa OR74A] gi|118496044|dbj|BAF37538.1| DNA repair and recombination protein MUS41 [Neurospora crassa] Length = 1175 Score = 85.8 bits (211), Expect = 3e-15, Method: Composition-based stats. Identities = 32/159 (20%), Positives = 54/159 (33%), Gaps = 21/159 (13%) Query: 51 VHDEKIKALEV----IIEKANAAPIIVAYHFNSDLARLQKAF---------PQGRTLDKD 97 KI AL + ++ +V F S L+ + A G K Sbjct: 1000 DSSAKIVALISHLRTLRQEHPKMKSLVISQFTSFLSLISSALTRHKISFLRLDGSMSQKA 1059 Query: 98 PCTI--QEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTR 155 + + + K +L + G GLNL + WW Q I+R+ Sbjct: 1060 RAAVLTEFQSTNKFCVLLLSLKAGGVGLNLT-SAKRVYMMDPWWSFAVEAQAIDRV---- 1114 Query: 156 QRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 + G + V VY I + +++ +L+ K I L Sbjct: 1115 -HRMGQEDEVRVYRFIVKQSVEMRMLRVQERKKFIATSL 1152 >gi|126728045|ref|ZP_01743861.1| hypothetical protein SSE37_18682 [Sagittula stellata E-37] gi|126711010|gb|EBA10060.1| hypothetical protein SSE37_18682 [Sagittula stellata E-37] Length = 492 Score = 85.8 bits (211), Expect = 3e-15, Method: Composition-based stats. Identities = 42/215 (19%), Positives = 87/215 (40%), Gaps = 24/215 (11%) Query: 2 KQYHKFQRELYCDL----QGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIK 57 K Y ++ + ++ Q +A + ++ +Q+ + DE + K+ Sbjct: 262 KLYDTYREQARAEVMQGGQLAEDDAEAVLKRLLRLVQVTSNPALVDENYKEEPG---KVA 318 Query: 58 ALEVIIEKA--NAAPIIVAYHFNSDLARLQKAFPQGR--------TLDKDPCTIQEW-NE 106 L ++ +A + + +IV F + L + + ++ I+++ N Sbjct: 319 ELNRLVREATDDGSKVIVWTSFVRNAEWLCRRLAEYGAVRVHGELPIEVRNRAIEDFKNR 378 Query: 107 GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVF 166 I +L A P + GL L N +++ + L+++ Q +RI + KR + Sbjct: 379 EDISVLVATPGAAKEGLTLTV-ANHAIYYDRSFSLDDYLQSQDRI-----HRISQKRECY 432 Query: 167 VYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 ++ LI +TID V L K LL + + KE Sbjct: 433 IWNLICDDTIDCWVDSLLSAKRLAAQLLQSDVCKE 467 >gi|114658983|ref|XP_001170738.1| PREDICTED: chromodomain helicase DNA binding protein 2 isoform 7 [Pan troglodytes] Length = 1777 Score = 85.8 bits (211), Expect = 3e-15, Method: Composition-based stats. Identities = 20/104 (19%), Positives = 44/104 (42%), Gaps = 8/104 (7%) Query: 97 DPCTIQEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 + +N + + G G+NL + +V F W+ + Q R Sbjct: 795 RKQALDHFNADGSEDFCFLLSTRAGGLGINL-ASADTVVIFDSDWNPQNDLQAQAR---- 849 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNAL 198 + G K+ V +Y L+ + T++E +++R + K + L++ + Sbjct: 850 -AHRIGQKKQVNIYRLVTKGTVEEEIIERAKKKMVLDHLVIQRM 892 >gi|62543565|ref|NP_031984.1| SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1 [Mus musculus] gi|29427670|sp|Q04692|SMRCD_MOUSE RecName: Full=SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1; AltName: Full=ATP-dependent helicase SMARCAD1; AltName: Full=Enhancer trap locus homolog 1; Short=Etl-1 Length = 1021 Score = 85.8 bits (211), Expect = 3e-15, Method: Composition-based stats. Identities = 31/157 (19%), Positives = 63/157 (40%), Gaps = 19/157 (12%) Query: 51 VHDEKIKALEVIIEKAN--AAPIIVAYHFNSDLARL---------QKAFPQGRT-LDKDP 98 + K +AL I+ + +++ F L L + G+T + + Sbjct: 846 LDSGKFRALGCILSELKQKGDRVVLFSQFTMMLDILEVLLKHHQHRYLRLDGKTQISERI 905 Query: 99 CTIQEWNEG-KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 I E+N I + + G G+NL N+++ + + +Q +R Sbjct: 906 HLIDEFNTDMDIFVFLLSTKAGGLGINLT-SANVVILHDIDCNPYNDKQAEDRC-----H 959 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 + G + V V LI+Q TI+E +L+ + K ++ + Sbjct: 960 RVGQTKEVLVIKLISQGTIEESMLKINQQKLKLEQDM 996 >gi|311248656|ref|XP_003123249.1| PREDICTED: LOW QUALITY PROTEIN: transcription activator BRG1 [Sus scrofa] Length = 1475 Score = 85.8 bits (211), Expect = 3e-15, Method: Composition-based stats. Identities = 30/160 (18%), Positives = 62/160 (38%), Gaps = 20/160 (12%) Query: 52 HDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAF---------PQGRTLDKDPCT 100 K + L+ I+ +A +++ S + ++ F G T +D Sbjct: 1078 ASGKFELLDRILPKLRATNHKVLLFCQMTSLMTIMEDYFAYRGFKYLRLDGTTKAEDRGM 1137 Query: 101 I-QEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 + + +NE + + + G GLNLQ + ++ F W+ + Q R Sbjct: 1138 LLKTFNEPGSEYFIFLLSTRAGGLGLNLQ-SADTVIIFDSDWNPHQDLQA-----QDRAH 1191 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + G + V V L N+++E +L + K + ++ A Sbjct: 1192 RIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQA 1231 >gi|308483748|ref|XP_003104075.1| hypothetical protein CRE_01100 [Caenorhabditis remanei] gi|308258383|gb|EFP02336.1| hypothetical protein CRE_01100 [Caenorhabditis remanei] Length = 1083 Score = 85.8 bits (211), Expect = 3e-15, Method: Composition-based stats. Identities = 30/160 (18%), Positives = 65/160 (40%), Gaps = 20/160 (12%) Query: 56 IKALEVIIEKANAAPIIVAYHFNSDLARLQKAF---------PQGRTLDKDPCT-IQEWN 105 ++ + I+++ +++ + S L ++K G+ L KD + +N Sbjct: 910 LEIVRDILDR--KEKVVIVSQWTSVLNLVEKHIQNGGHNYTSITGQVLVKDRQERVDSFN 967 Query: 106 --EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKR 163 +G ++ + G GGN L+ L W+ QQ +RI + G K+ Sbjct: 968 QEKGGAQVMLLSL-TAGGVGLNLVGGNHLIMIDLHWNPALEQQACDRI-----YRMGQKK 1021 Query: 164 AVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETI 203 V ++ L+ + TI++ V+ K + +L+ + Sbjct: 1022 PVHIHRLVVKGTIEQRVMDLQEKKLALAASVLDGTATRKM 1061 >gi|261198487|ref|XP_002625645.1| SNF2 family helicase [Ajellomyces dermatitidis SLH14081] gi|239594797|gb|EEQ77378.1| SNF2 family helicase [Ajellomyces dermatitidis SLH14081] Length = 929 Score = 85.8 bits (211), Expect = 3e-15, Method: Composition-based stats. Identities = 37/166 (22%), Positives = 63/166 (37%), Gaps = 26/166 (15%) Query: 42 YDEEKHWKEVHDEKIKALEVIIEKANAAP---IIVAYHFNSDLA--------------RL 84 +E E KI+AL I+ AP +V + S L R+ Sbjct: 745 TNEIDIDPETTSSKIEALLKILTAKGQAPNTKTVVFSQWVSFLDIVEPQLARNGITFARI 804 Query: 85 QKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEH 144 + +D N+ +L A C GLNL N ++ WW Sbjct: 805 DGRMSSAK---RDAAMKALSNDPNCTVLLASLNVCSVGLNL-VAANQVILADSWWAPAIE 860 Query: 145 QQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 Q ++R+ + G KR ++ L+ +N+I++ VL + + K T+ Sbjct: 861 DQAVDRV-----YRLGQKRPTTIWRLVMENSIEDRVLHKQKEKRTL 901 >gi|321457359|gb|EFX68447.1| hypothetical protein DAPPUDRAFT_260126 [Daphnia pulex] Length = 462 Score = 85.8 bits (211), Expect = 3e-15, Method: Composition-based stats. Identities = 29/145 (20%), Positives = 55/145 (37%), Gaps = 11/145 (7%) Query: 58 ALEVIIEKANA-----APIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLL 112 L+ I+++ I++ + + L + + N+ +L Sbjct: 299 KLKYILDEVQGILSVKEKIVIVSQWTAMLDLIAIQLDNLSIAYQVINGNISANKRTDIIL 358 Query: 113 FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIA 172 + G GLNL GGN L W+ + Q RI + G ++V V+ ++ Sbjct: 359 LLSLLAGGTGLNL-IGGNHLFLVDPHWNPQLEAQATNRIF-----RIGQTKSVSVHRIVI 412 Query: 173 QNTIDELVLQRLRTKSTIQDLLLNA 197 Q++I+E VL K D ++ Sbjct: 413 QDSIEEKVLALQLNKIATADTIITG 437 >gi|312127313|ref|YP_003992187.1| SNF2-like protein [Caldicellulosiruptor hydrothermalis 108] gi|311777332|gb|ADQ06818.1| SNF2-related protein [Caldicellulosiruptor hydrothermalis 108] Length = 939 Score = 85.8 bits (211), Expect = 3e-15, Method: Composition-based stats. Identities = 39/222 (17%), Positives = 83/222 (37%), Gaps = 33/222 (14%) Query: 1 MKQYHKFQ-RELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHD-----E 54 M Y K ++ D + + K + + + +++ H K ++ Sbjct: 698 MTDYQKMLYSKIIADFKKSENKKQILLDTLHKLIYVCDFPEISNDDIHKKNINKVVKECA 757 Query: 55 KIKALEVIIEK--ANAAPIIVAYHFNS---DLARLQK-------AFPQGRTLD--KDPCT 100 K+K L I+++ ++ F L+ + + G D + Sbjct: 758 KVKKLIEILDEIKQKDEKALIFTKFKPVQAMLSSIIQQRYGLFVNILNGEIRDSSRRKQI 817 Query: 101 IQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQA 159 I +N + +L + G GLN+ N ++ ++ W+ + Q +R+ + Sbjct: 818 IDNFNQSAEFNVLILNTQVGGIGLNIT-SANHVIHYTREWNPAKEDQATDRV-----YRI 871 Query: 160 GFKRAVFVYYLIA------QNTIDELVLQRLRTKSTIQDLLL 195 G ++ V VYYLI + TIDE + L+ K + ++ Sbjct: 872 GQQKDVNVYYLITTAPDLVKKTIDEHIHDLLQAKKELFKEVI 913 >gi|148612870|ref|NP_004275.3| chromodomain-helicase-DNA-binding protein 1-like [Homo sapiens] gi|311033359|sp|Q86WJ1|CHD1L_HUMAN RecName: Full=Chromodomain-helicase-DNA-binding protein 1-like; AltName: Full=Amplified in liver cancer protein 1 gi|55663194|emb|CAH72650.1| chromodomain helicase DNA binding protein 1-like [Homo sapiens] Length = 897 Score = 85.8 bits (211), Expect = 3e-15, Method: Composition-based stats. Identities = 34/216 (15%), Positives = 79/216 (36%), Gaps = 33/216 (15%) Query: 1 MKQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYD-------EEKHWKEVHD 53 MK F+ E + ++ N S+ KC + +D E Sbjct: 295 MKDLDAFENET-----AKKVKLQNILSQLRKC---VDHPYLFDGVEPEPFEVGDHLTEAS 346 Query: 54 EKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAFP---------QGRTLDKDPC-TI 101 K+ L+ ++ + +++ L LQ G ++ I Sbjct: 347 GKLHLLDKLLAFLYSGGHRVLLFSQMTQMLDILQDYMDYRGYSYERVDGSVRGEERHLAI 406 Query: 102 QEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGF 161 + + + I + + G G+NL + ++F ++ + Q R + G Sbjct: 407 KNFGQQPIFVFLLSTRAGGVGMNLT-AADTVIFVDSDFNPQNDLQAAAR-----AHRIGQ 460 Query: 162 KRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 ++V V LI ++T++E+V ++ +K + ++++ Sbjct: 461 NKSVKVIRLIGRDTVEEIVYRKAASKLQLTNMIIEG 496 >gi|118373098|ref|XP_001019743.1| SNF2 family N-terminal domain containing protein [Tetrahymena thermophila] gi|89301510|gb|EAR99498.1| SNF2 family N-terminal domain containing protein [Tetrahymena thermophila SB210] Length = 1254 Score = 85.8 bits (211), Expect = 3e-15, Method: Composition-based stats. Identities = 40/196 (20%), Positives = 65/196 (33%), Gaps = 29/196 (14%) Query: 3 QYHKFQRELYCDLQGENIEAFNSASKTVKCLQ-LANGAVYYDEEKHWKEVHDEKIKALEV 61 + + E L I K LQ L NG KH + + LE Sbjct: 443 LFEGIEEEGLPPLGEHIITNCGKMMVLDKLLQKLKNG-------KHQVLIFSQMTMVLED 495 Query: 62 IIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIP-LLFAHPASCG 120 F R+ D+D E + + G Sbjct: 496 YCN---------YRQFK--YCRIDGNTDMT---DRDNQISDFVKEDSTKYIFLLSTRAGG 541 Query: 121 HGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELV 180 G+NL + +V + W+ + Q ++R + G K V VY LI++NTI+E + Sbjct: 542 LGINL-ATADTVVLYDSDWNPQMDLQAMDR-----AHRIGQKNIVNVYRLISENTIEEKI 595 Query: 181 LQRLRTKSTIQDLLLN 196 ++R K L++ Sbjct: 596 IERQTIKLKWDQLIIQ 611 >gi|73946649|ref|XP_860440.1| PREDICTED: similar to SWI/SNF-related matrix-associated actin-dependent regulator of chromatin a2 isoform b isoform 23 [Canis familiaris] Length = 1556 Score = 85.8 bits (211), Expect = 3e-15, Method: Composition-based stats. Identities = 31/160 (19%), Positives = 63/160 (39%), Gaps = 20/160 (12%) Query: 52 HDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAF---------PQGRTLDKDPCT 100 K + L+ I+ +A +++ S + ++ F G T +D Sbjct: 1032 ASGKFELLDRILPKLRATNHRVLLFCQMTSLMTIMEDYFAFRNFLYLRLDGTTKSEDRAA 1091 Query: 101 I-QEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 + +++NE + + + G GLNLQ + +V F W+ + Q R Sbjct: 1092 LLKKFNEPGSQYFIFLLSTRAGGLGLNLQ-AADTVVIFDSDWNPHQDLQA-----QDRAH 1145 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + G + V V L N+++E +L + K + ++ A Sbjct: 1146 RIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQA 1185 >gi|66800671|ref|XP_629261.1| chromo domain-containing protein [Dictyostelium discoideum AX4] gi|60462656|gb|EAL60858.1| chromo domain-containing protein [Dictyostelium discoideum AX4] Length = 3071 Score = 85.8 bits (211), Expect = 3e-15, Method: Composition-based stats. Identities = 27/174 (15%), Positives = 60/174 (34%), Gaps = 20/174 (11%) Query: 42 YDEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAF---------PQ 90 +E K+ ++ ++++ A +++ L L+ Sbjct: 1198 DEELGELLVKSSSKLVLVDKLLQRLKAEGHQVLIFSQMVESLNILEDYLQYREYTYERLD 1257 Query: 91 GRTLDKDPCT-IQEWNE--GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQM 147 G + I + + + + G G+NL + ++ F W+ + Q Sbjct: 1258 GSIKSEVRQASIDRFQDKGANRFVFLLSTRAGGVGINLTT-ADTVILFDSDWNPQSDLQA 1316 Query: 148 IERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 R + G V VY LI +NT +E + + K + ++L+ K + Sbjct: 1317 QARC-----HRIGQTNNVKVYRLITRNTYEEYLFECATKKLLLDHIVLSTNKDK 1365 >gi|327351006|gb|EGE79863.1| SNF2 family helicase [Ajellomyces dermatitidis ATCC 18188] Length = 931 Score = 85.8 bits (211), Expect = 3e-15, Method: Composition-based stats. Identities = 37/166 (22%), Positives = 63/166 (37%), Gaps = 26/166 (15%) Query: 42 YDEEKHWKEVHDEKIKALEVIIEKANAAP---IIVAYHFNSDLA--------------RL 84 +E E KI+AL I+ AP +V + S L R+ Sbjct: 747 TNEIDIDPETTSSKIEALLKILTAKGQAPNTKTVVFSQWVSFLDIVEPQLARNGITFARI 806 Query: 85 QKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEH 144 + +D N+ +L A C GLNL N ++ WW Sbjct: 807 DGRMSSAK---RDAAMKALSNDPNCTVLLASLNVCSVGLNL-VAANQVILADSWWAPAIE 862 Query: 145 QQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 Q ++R+ + G KR ++ L+ +N+I++ VL + + K T+ Sbjct: 863 DQAVDRV-----YRLGQKRPTTIWRLVMENSIEDRVLHKQKEKRTL 903 >gi|114558342|ref|XP_513751.2| PREDICTED: chromodomain helicase DNA binding protein 1-like isoform 9 [Pan troglodytes] Length = 684 Score = 85.8 bits (211), Expect = 3e-15, Method: Composition-based stats. Identities = 35/217 (16%), Positives = 79/217 (36%), Gaps = 35/217 (16%) Query: 1 MKQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDE--------EKHWKEVH 52 MK F+ E + ++ N S+ KC + +D H E Sbjct: 295 MKDLDAFENET-----AKKVKLQNILSQLRKC---VDHPYLFDGVEPEPFEVGDHLIE-A 345 Query: 53 DEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAFP---------QGRTLDKDPC-T 100 K+ L+ ++ + +++ L LQ G ++ Sbjct: 346 SGKLHLLDKLLAFLYSGGHRVLLFSQMTQMLDILQDYMDYRGYSYERVDGSVRGEERHLA 405 Query: 101 IQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 I+ + I + + G G+NL + ++F ++ + Q R + G Sbjct: 406 IKNFGRQPIFVFLLSTRAGGVGMNLT-AADTVIFVDSDFNPQNDLQAAAR-----AHRIG 459 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 ++V V LI ++T++E+V ++ +K + ++++ Sbjct: 460 QNKSVKVIRLIGRDTVEEIVYRKAASKLQLTNMIIEG 496 >gi|168705803|ref|ZP_02738080.1| swi/snf family helicase_2 [Gemmata obscuriglobus UQM 2246] Length = 183 Score = 85.8 bits (211), Expect = 3e-15, Method: Composition-based stats. Identities = 31/149 (20%), Positives = 54/149 (36%), Gaps = 17/149 (11%) Query: 56 IKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLD---------KDPCTIQEWNE 106 + +E + E I+ + L L KA + L + P + ++ Sbjct: 12 LSDMEEVAES--GRKAIIFSQWVEPLEVLAKALAKYGPLQYHGKIPQPQRTPILDRFKSD 69 Query: 107 GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVF 166 +L + GLNLQ+ N + F WW+ Q I R + G K V Sbjct: 70 PSAHVLLMSYGTGSVGLNLQF-TNYVFLFDRWWNPAIEDQAINR-----AHRLGQKHPVT 123 Query: 167 VYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 V ++ TI+ + L K + + L+ Sbjct: 124 VTRFLSGGTIEGRIADILDAKRKVFNDLI 152 >gi|31322808|gb|AAP31846.1| Brg1p [Tetrahymena thermophila] Length = 1228 Score = 85.8 bits (211), Expect = 3e-15, Method: Composition-based stats. Identities = 35/177 (19%), Positives = 70/177 (39%), Gaps = 24/177 (13%) Query: 37 NGAVYYDEEKHWKEVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQKAFP----- 89 N Y ++ WK K + L+ ++ K +++ + +++ F Sbjct: 720 NSDAYQIDDMIWKV--SGKFELLDKMLAKLIRTGHRVLIFTQMTHVMDLMEEYFKLREDY 777 Query: 90 ------QGRTL-DKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWD 140 G T D+ + ++N+ P + + G GLNLQ + ++ F W+ Sbjct: 778 IKYLRLDGTTKADERGVKMAQFNQPNSPYNVFILSTRAGGLGLNLQT-ADTVIIFDSDWN 836 Query: 141 LEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + QQ R + G K V VY L+ I+E +L + K + ++++ A Sbjct: 837 PQMDQQA-----QDRAHRIGSKSEVRVYRLVTNTWIEEEILSKAAYKMGLDEMIIQA 888 >gi|86136167|ref|ZP_01054746.1| probable swi/snf family helicase 2 [Roseobacter sp. MED193] gi|85827041|gb|EAQ47237.1| probable swi/snf family helicase 2 [Roseobacter sp. MED193] Length = 603 Score = 85.8 bits (211), Expect = 3e-15, Method: Composition-based stats. Identities = 37/162 (22%), Positives = 64/162 (39%), Gaps = 34/162 (20%) Query: 55 KIKALEVIIEKA--NAAPIIVAYHFNSDLARLQKA---FPQ-------GRTLDKDPCTIQ 102 K++ ++ +A N +IV FN L++A P G T +D TI Sbjct: 434 KMERAVDLLREAFANGRKVIVFALFNRIGDLLKQACSHLPDTHWGAINGSTPQEDRQTI- 492 Query: 103 EWNEGKIPLLFAH---------PASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGV 153 I L AH P + G GLN+ +++ F+ W+ Q R Sbjct: 493 ------IDLFAAHEGSACLVLNPKAAGAGLNIT-AATVVIHFTPVWNPALEAQASAR--- 542 Query: 154 TRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 + G V VY L +T++E+++ R K+ + + + Sbjct: 543 --AHRRGQTEPVTVYRLFYLDTVEEVMIDRSAWKNDLANETV 582 >gi|218200191|gb|EEC82618.1| hypothetical protein OsI_27196 [Oryza sativa Indica Group] Length = 1734 Score = 85.8 bits (211), Expect = 3e-15, Method: Composition-based stats. Identities = 24/147 (16%), Positives = 52/147 (35%), Gaps = 18/147 (12%) Query: 69 APIIVAYHFNSDLARLQKAF---------PQGRTL-DKDPCTIQEWNEG--KIPLLFAHP 116 +++ L L + G T D ++ +N Sbjct: 929 HRVLIFSQMVRMLDILAEYLSLRGFQFQRLDGSTRADLRHQAMEHFNAPGSDDFCFLLST 988 Query: 117 ASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTI 176 + G G+NL + ++ F W+ + Q + R + G + V +Y + ++ Sbjct: 989 RAGGLGINL-ATADTVIIFDSDWNPQNDLQAMSR-----AHRIGQQETVNIYRFVTCKSV 1042 Query: 177 DELVLQRLRTKSTIQDLLLNALKKETI 203 +E +L+R + K + L++ L E Sbjct: 1043 EEDILERAKKKMVLDHLVIQKLNAEGR 1069 >gi|149944717|ref|NP_001092585.1| probable global transcription activator SNF2L2 [Bos taurus] gi|148745424|gb|AAI42522.1| SMARCA2 protein [Bos taurus] gi|296484787|gb|DAA26902.1| SWI/SNF-related matrix-associated actin-dependent regulator of chromatin a2 [Bos taurus] Length = 1554 Score = 85.8 bits (211), Expect = 3e-15, Method: Composition-based stats. Identities = 31/160 (19%), Positives = 63/160 (39%), Gaps = 20/160 (12%) Query: 52 HDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAF---------PQGRTLDKDPCT 100 K + L+ I+ +A +++ S + ++ F G T +D Sbjct: 1030 ASGKFELLDRILPKLRATNHRVLLFCQMTSLMTIMEDYFAFRNFLYLRLDGTTKSEDRAA 1089 Query: 101 I-QEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 + +++NE + + + G GLNLQ + +V F W+ + Q R Sbjct: 1090 LLKKFNEPGSQYFIFLLSTRAGGLGLNLQ-AADTVVIFDSDWNPHQDLQA-----QDRAH 1143 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + G + V V L N+++E +L + K + ++ A Sbjct: 1144 RIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQA 1183 >gi|48255898|ref|NP_620614.2| probable global transcription activator SNF2L2 isoform b [Homo sapiens] gi|55957478|emb|CAI14600.1| SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2 [Homo sapiens] gi|55958983|emb|CAI12968.1| SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2 [Homo sapiens] gi|119579217|gb|EAW58813.1| SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, isoform CRA_c [Homo sapiens] gi|119579219|gb|EAW58815.1| SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, isoform CRA_c [Homo sapiens] gi|162318924|gb|AAI56186.1| SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2 [synthetic construct] gi|307686381|dbj|BAJ21121.1| SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2 [synthetic construct] Length = 1572 Score = 85.8 bits (211), Expect = 3e-15, Method: Composition-based stats. Identities = 31/160 (19%), Positives = 63/160 (39%), Gaps = 20/160 (12%) Query: 52 HDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAF---------PQGRTLDKDPCT 100 K + L+ I+ +A +++ S + ++ F G T +D Sbjct: 1048 ASGKFELLDRILPKLRATNHRVLLFCQMTSLMTIMEDYFAFRNFLYLRLDGTTKSEDRAA 1107 Query: 101 I-QEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 + +++NE + + + G GLNLQ + +V F W+ + Q R Sbjct: 1108 LLKKFNEPGSQYFIFLLSTRAGGLGLNLQ-AADTVVIFDSDWNPHQDLQA-----QDRAH 1161 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + G + V V L N+++E +L + K + ++ A Sbjct: 1162 RIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQA 1201 >gi|293355127|ref|XP_002728634.1| PREDICTED: rCG44314-like [Rattus norvegicus] Length = 2802 Score = 85.8 bits (211), Expect = 3e-15, Method: Composition-based stats. Identities = 25/146 (17%), Positives = 51/146 (34%), Gaps = 18/146 (12%) Query: 65 KANAAPIIVAYHFNSDLARLQKAFP---------QGRTL-DKDPCTIQEWNEGKIP--LL 112 KA +++ L L+ GR + I +++ + Sbjct: 1194 KAGGHKVLIFSQMVRCLDILEDYLIHKRYLYERIDGRVRGNLRQAAIDRFSKPDSDRFVF 1253 Query: 113 FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIA 172 + G G+NL + + F W+ + Q R + G +AV VY L+ Sbjct: 1254 LLCTRAGGLGINLT-AADTCIIFDSDWNPQNDLQAQARC-----HRIGQNKAVKVYRLVT 1307 Query: 173 QNTIDELVLQRLRTKSTIQDLLLNAL 198 +N+ + + R K + +L ++ Sbjct: 1308 RNSYEREMFDRASLKLGLDKAVLQSM 1333 >gi|293343243|ref|XP_002725430.1| PREDICTED: Chd9 protein-like isoform 2 [Rattus norvegicus] Length = 2876 Score = 85.8 bits (211), Expect = 3e-15, Method: Composition-based stats. Identities = 25/146 (17%), Positives = 51/146 (34%), Gaps = 18/146 (12%) Query: 65 KANAAPIIVAYHFNSDLARLQKAFP---------QGRTL-DKDPCTIQEWNEGKIP--LL 112 KA +++ L L+ GR + I +++ + Sbjct: 1194 KAGGHKVLIFSQMVRCLDILEDYLIHKRYLYERIDGRVRGNLRQAAIDRFSKPDSDRFVF 1253 Query: 113 FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIA 172 + G G+NL + + F W+ + Q R + G +AV VY L+ Sbjct: 1254 LLCTRAGGLGINLT-AADTCIIFDSDWNPQNDLQAQARC-----HRIGQNKAVKVYRLVT 1307 Query: 173 QNTIDELVLQRLRTKSTIQDLLLNAL 198 +N+ + + R K + +L ++ Sbjct: 1308 RNSYEREMFDRASLKLGLDKAVLQSM 1333 >gi|226294171|gb|EEH49591.1| DNA repair protein rad5 [Paracoccidioides brasiliensis Pb18] Length = 1188 Score = 85.8 bits (211), Expect = 3e-15, Method: Composition-based stats. Identities = 33/183 (18%), Positives = 52/183 (28%), Gaps = 46/183 (25%) Query: 52 HDEKIKALEVIIEKA-NAAPIIVAYHFNSDLARLQKAFPQGRTL---------------- 94 KI AL + K + ++V F S L + Sbjct: 986 TSAKIHALISHLTKLPSNDKVVVFSQFTSFLDLIGHQLTCAGISHLRFDGSISQTSRAAV 1045 Query: 95 --------------------DKDPCTIQEWNEGKIP---LLFAHPASCGHGLNLQYGGNI 131 + N K +L + G GLNL N Sbjct: 1046 LAKFCSVAVADDKNDDDDEGKRQSKLPSSNNHAKESPPNVLLISLRAGGVGLNLT-AANH 1104 Query: 132 LVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQ 191 ++ WW Q I+R+ + G R V V I +++I+ +L+ K I Sbjct: 1105 VIMMDPWWSFATEAQAIDRV-----HRMGQLRDVTVTRFIVKDSIEGRILKIQERKMMIA 1159 Query: 192 DLL 194 L Sbjct: 1160 GSL 1162 >gi|225684512|gb|EEH22796.1| DNA repair protein rad5 [Paracoccidioides brasiliensis Pb03] Length = 1247 Score = 85.8 bits (211), Expect = 3e-15, Method: Composition-based stats. Identities = 33/183 (18%), Positives = 52/183 (28%), Gaps = 46/183 (25%) Query: 52 HDEKIKALEVIIEKA-NAAPIIVAYHFNSDLARLQKAFPQGRTL---------------- 94 KI AL + K + ++V F S L + Sbjct: 1045 TSAKIHALISHLTKLPSNDKVVVFSQFTSFLDLIGHQLTCAGISHLRFDGSISQTSRAAV 1104 Query: 95 --------------------DKDPCTIQEWNEGKIP---LLFAHPASCGHGLNLQYGGNI 131 + N K +L + G GLNL N Sbjct: 1105 LAKFCSVAVADDKNDDDDEGKRQSKLPSSNNHAKESPPNVLLISLRAGGVGLNLT-AANH 1163 Query: 132 LVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQ 191 ++ WW Q I+R+ + G R V V I +++I+ +L+ K I Sbjct: 1164 VIMMDPWWSFATEAQAIDRV-----HRMGQLRDVTVTRFIVKDSIEGRILKIQERKMMIA 1218 Query: 192 DLL 194 L Sbjct: 1219 GSL 1221 >gi|149032671|gb|EDL87541.1| rCG44314 [Rattus norvegicus] Length = 2698 Score = 85.8 bits (211), Expect = 3e-15, Method: Composition-based stats. Identities = 25/146 (17%), Positives = 51/146 (34%), Gaps = 18/146 (12%) Query: 65 KANAAPIIVAYHFNSDLARLQKAFP---------QGRTL-DKDPCTIQEWNEGKIP--LL 112 KA +++ L L+ GR + I +++ + Sbjct: 1194 KAGGHKVLIFSQMVRCLDILEDYLIHKRYLYERIDGRVRGNLRQAAIDRFSKPDSDRFVF 1253 Query: 113 FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIA 172 + G G+NL + + F W+ + Q R + G +AV VY L+ Sbjct: 1254 LLCTRAGGLGINLT-AADTCIIFDSDWNPQNDLQAQARC-----HRIGQNKAVKVYRLVT 1307 Query: 173 QNTIDELVLQRLRTKSTIQDLLLNAL 198 +N+ + + R K + +L ++ Sbjct: 1308 RNSYEREMFDRASLKLGLDKAVLQSM 1333 >gi|293343241|ref|XP_002725429.1| PREDICTED: Chd9 protein-like isoform 1 [Rattus norvegicus] Length = 2867 Score = 85.8 bits (211), Expect = 3e-15, Method: Composition-based stats. Identities = 25/146 (17%), Positives = 51/146 (34%), Gaps = 18/146 (12%) Query: 65 KANAAPIIVAYHFNSDLARLQKAFP---------QGRTL-DKDPCTIQEWNEGKIP--LL 112 KA +++ L L+ GR + I +++ + Sbjct: 1194 KAGGHKVLIFSQMVRCLDILEDYLIHKRYLYERIDGRVRGNLRQAAIDRFSKPDSDRFVF 1253 Query: 113 FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIA 172 + G G+NL + + F W+ + Q R + G +AV VY L+ Sbjct: 1254 LLCTRAGGLGINLT-AADTCIIFDSDWNPQNDLQAQARC-----HRIGQNKAVKVYRLVT 1307 Query: 173 QNTIDELVLQRLRTKSTIQDLLLNAL 198 +N+ + + R K + +L ++ Sbjct: 1308 RNSYEREMFDRASLKLGLDKAVLQSM 1333 >gi|62733578|gb|AAX95695.1| SNF2 family N-terminal domain, putative [Oryza sativa Japonica Group] gi|108710803|gb|ABF98598.1| Swi2/Snf2-related protein DDM1, putative [Oryza sativa Japonica Group] Length = 811 Score = 85.8 bits (211), Expect = 3e-15, Method: Composition-based stats. Identities = 20/142 (14%), Positives = 54/142 (38%), Gaps = 18/142 (12%) Query: 66 ANAAPIIVAYHFNSDLARLQK----------AFPQGRTLDKDPCTIQEWN--EGKIPLLF 113 A +++ + L ++ L++ I E+N + + Sbjct: 585 ARKHKVLIFSQWTKVLDIIEYYLETKGLQVCRIDGSVKLEERRRQIAEFNDLNSSMNIFI 644 Query: 114 AHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQ 173 + G G+NL + + + W+ + Q ++R + G R V VY L Sbjct: 645 LSTRAGGLGINLT-SADTCILYDSDWNPQMDLQAMDRC-----HRIGQTRPVHVYRLATS 698 Query: 174 NTIDELVLQRLRTKSTIQDLLL 195 ++++ ++++ K ++ +++ Sbjct: 699 HSVEGRIIKKAFGKLRLEHVVI 720 >gi|222637616|gb|EEE67748.1| hypothetical protein OsJ_25446 [Oryza sativa Japonica Group] Length = 1734 Score = 85.8 bits (211), Expect = 3e-15, Method: Composition-based stats. Identities = 24/147 (16%), Positives = 52/147 (35%), Gaps = 18/147 (12%) Query: 69 APIIVAYHFNSDLARLQKAF---------PQGRTL-DKDPCTIQEWNEG--KIPLLFAHP 116 +++ L L + G T D ++ +N Sbjct: 929 HRVLIFSQMVRMLDILAEYLSLRGFQFQRLDGSTRADLRHQAMEHFNAPGSDDFCFLLST 988 Query: 117 ASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTI 176 + G G+NL + ++ F W+ + Q + R + G + V +Y + ++ Sbjct: 989 RAGGLGINL-ATADTVIIFDSDWNPQNDLQAMSR-----AHRIGQQETVNIYRFVTCKSV 1042 Query: 177 DELVLQRLRTKSTIQDLLLNALKKETI 203 +E +L+R + K + L++ L E Sbjct: 1043 EEDILERAKKKMVLDHLVIQKLNAEGR 1069 >gi|68483838|ref|XP_714194.1| hypothetical protein CaO19.8240 [Candida albicans SC5314] gi|46435735|gb|EAK95111.1| hypothetical protein CaO19.8240 [Candida albicans SC5314] Length = 1055 Score = 85.8 bits (211), Expect = 3e-15, Method: Composition-based stats. Identities = 27/168 (16%), Positives = 61/168 (36%), Gaps = 25/168 (14%) Query: 53 DEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQK----------------AFPQGRTL 94 K++ L+ ++ ++ ++ L L+K + Sbjct: 612 SGKMQVLKNLLRLWQSENHKTLLFCQTRQMLDILEKFVANLSLINGGDFNYLRMDGSTPI 671 Query: 95 DKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGV 153 K + +N + + + G G+NL G + ++ + W+ Q ER Sbjct: 672 SKRQMLVDAFNQDPDMHVFLLTTKVGGLGVNLT-GADRVIIYDPDWNPSTDIQARERAW- 729 Query: 154 TRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 + G KR + +Y L+ +I+E + R K+ + + +L K+ Sbjct: 730 ----RLGQKRDITIYRLMTTGSIEEKIYHRQIFKTFLTNKILKDPKQR 773 >gi|82596119|ref|XP_726130.1| hypothetical protein [Plasmodium yoelii yoelii str. 17XNL] gi|23481408|gb|EAA17695.1| SNF2 family N-terminal domain, putative [Plasmodium yoelii yoelii] Length = 1312 Score = 85.8 bits (211), Expect = 3e-15, Method: Composition-based stats. Identities = 29/149 (19%), Positives = 57/149 (38%), Gaps = 18/149 (12%) Query: 65 KANAAPIIVAYHFNSDLARLQ-----KAFPQGRTLDKDPC-----TIQEWNEGK--IPLL 112 +A +++ F L L+ + + R I+E+N + Sbjct: 1138 EAKMHKVLIFTQFQLVLDELEEYCKYRCWKYMRLDGSTNKLIRELDIREFNLSDSIYFIY 1197 Query: 113 FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIA 172 + G G+NL N ++ + W+ Q I+R + G KR V V+ L+ Sbjct: 1198 LISTRAGGLGINLT-AANHVIMYDEDWNPFIDLQAIDR-----AHRIGQKREVNVWKLMT 1251 Query: 173 QNTIDELVLQRLRTKSTIQDLLLNALKKE 201 + T++E + R K + L++ + E Sbjct: 1252 EWTVEERMAFRREQKLKLDKLVVQTQEDE 1280 >gi|312385188|gb|EFR29745.1| hypothetical protein AND_01060 [Anopheles darlingi] Length = 5373 Score = 85.8 bits (211), Expect = 3e-15, Method: Composition-based stats. Identities = 23/146 (15%), Positives = 55/146 (37%), Gaps = 18/146 (12%) Query: 65 KANAAPIIVAYHFNSDLARLQ-----KAFPQGRTLDK-----DPCTIQEWNEGKIP--LL 112 +AN +++ L L+ K +P R + I +++ + Sbjct: 1601 RANGHRVLIFSQMVRCLDILEDYLMYKKYPFERIDGRIRGNLRQAAIDRYSKPDSDRFVF 1660 Query: 113 FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIA 172 + G G+NL + ++ + W+ + Q R + G ++ V +Y L+ Sbjct: 1661 LLCTKAGGLGINLT-AADTVIIYDSDWNPQNDLQAQARC-----HRIGQQKMVKIYRLLC 1714 Query: 173 QNTIDELVLQRLRTKSTIQDLLLNAL 198 +NT + + + K + +L ++ Sbjct: 1715 RNTYEREMFDKASLKLGLDKAVLQSM 1740 >gi|308501284|ref|XP_003112827.1| CRE-LET-418 protein [Caenorhabditis remanei] gi|308267395|gb|EFP11348.1| CRE-LET-418 protein [Caenorhabditis remanei] Length = 1884 Score = 85.8 bits (211), Expect = 3e-15, Method: Composition-based stats. Identities = 23/167 (13%), Positives = 56/167 (33%), Gaps = 20/167 (11%) Query: 45 EKHWKEVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARL---------QKAFPQGRT 93 E + K L+ ++ K +++ L + + G Sbjct: 913 EGTALIKNSGKFALLQKMLRKLKDGGHRVLIFSQMTMMLDIMEDFCDVEGYKYERIDGSI 972 Query: 94 LDKDPCT-IQEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 + I +N + + + G G+NL + ++ + W+ Q Sbjct: 973 TGQMRQDAIDRYNAPGAQQFIFLLSTRAGGLGINL-ATADTVIIYDSDWNPHNDIQA--- 1028 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 +R + G K V +Y + + +++E + + K + L++ A Sbjct: 1029 --FSRAHRLGQKHKVMIYRFVTKGSVEERITSVAKKKMLLNHLVVRA 1073 >gi|51593084|ref|NP_035546.2| probable global transcription activator SNF2L2 isoform 1 [Mus musculus] Length = 1583 Score = 85.8 bits (211), Expect = 3e-15, Method: Composition-based stats. Identities = 31/160 (19%), Positives = 63/160 (39%), Gaps = 20/160 (12%) Query: 52 HDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAF---------PQGRTLDKDPCT 100 K + L+ I+ +A +++ S + ++ F G T +D Sbjct: 1059 ASGKFELLDRILPKLRATNHRVLLFCQMTSLMTIMEDYFAFRNFLYLRLDGTTKSEDRAA 1118 Query: 101 I-QEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 + +++NE + + + G GLNLQ + +V F W+ + Q R Sbjct: 1119 LLKKFNEPGSQYFIFLLSTRAGGLGLNLQ-AADTVVIFDSDWNPHQDLQA-----QDRAH 1172 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + G + V V L N+++E +L + K + ++ A Sbjct: 1173 RIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQA 1212 >gi|52138743|ref|NP_001004446.1| probable global transcription activator SNF2L2 [Rattus norvegicus] gi|49616741|gb|AAT67217.1| SWI/SNF-related matrix-associated actin-dependent regulator of chromatin a2 [Rattus norvegicus] Length = 1597 Score = 85.8 bits (211), Expect = 3e-15, Method: Composition-based stats. Identities = 31/160 (19%), Positives = 63/160 (39%), Gaps = 20/160 (12%) Query: 52 HDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAF---------PQGRTLDKDPCT 100 K + L+ I+ +A +++ S + ++ F G T +D Sbjct: 1055 ASGKFELLDRILPKLRATNHRVLLFCQMTSLMTIMEDYFAFRNFLYLRLDGTTKSEDRAA 1114 Query: 101 I-QEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 + +++NE + + + G GLNLQ + +V F W+ + Q R Sbjct: 1115 LLKKFNEPGSQYFIFLLSTRAGGLGLNLQ-AADTVVIFDSDWNPHQDLQA-----QDRAH 1168 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + G + V V L N+++E +L + K + ++ A Sbjct: 1169 RIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQA 1208 >gi|281343214|gb|EFB18798.1| hypothetical protein PANDA_010098 [Ailuropoda melanoleuca] Length = 1318 Score = 85.8 bits (211), Expect = 3e-15, Method: Composition-based stats. Identities = 25/160 (15%), Positives = 52/160 (32%), Gaps = 20/160 (12%) Query: 45 EKHWKEVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQ----------KAFPQGR 92 E K+ L+ I+ K +++ L L+ + G Sbjct: 368 EGGALIKASGKLMLLQKILRKLKEQGHRVLIFSQMTKMLDLLEDFLDYEGYKYERIDGGI 427 Query: 93 TLDKDPCTIQEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 T I +N + + G G+NL + ++ F W+ Q Sbjct: 428 TGALRQEAIDRFNAPGAQQFCFLLSTRAGGLGINL-ATADTVIIFDSDWNPHNDIQA--- 483 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 +R + G V +Y + + +++E + Q + K + Sbjct: 484 --FSRAHRIGQANKVMIYRFVTRASVEERITQVAKRKMML 521 >gi|323508282|emb|CBQ68153.1| related to helicase-dna-binding protein [Sporisorium reilianum] Length = 2273 Score = 85.8 bits (211), Expect = 3e-15, Method: Composition-based stats. Identities = 28/166 (16%), Positives = 62/166 (37%), Gaps = 22/166 (13%) Query: 51 VHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTLD-----------KD 97 K+ L+ ++ K A +++ F +L + + F +G + Sbjct: 1323 DASAKLSLLQRLLPKLKAEGHRVLLFSQFVINLD-IVEVFLRGEGYKFLRLDGAIGQKQR 1381 Query: 98 PCTIQEWNEGKIPLLF--AHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTR 155 I +N P + G G+NL + ++ ++ Q I R Sbjct: 1382 QKGIDAFNAPDSPYFIYMISTRAGGVGINL-ATADTVIIMDPDFNPHVDMQAIAR----- 1435 Query: 156 QRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 + G + + V+ L+ + T +E +++ + K + L++ L KE Sbjct: 1436 AHRIGQTKKLLVFTLMCKATAEERMIESAKRKMMLDHLIVQNLDKE 1481 >gi|195496103|ref|XP_002095551.1| GE22457 [Drosophila yakuba] gi|194181652|gb|EDW95263.1| GE22457 [Drosophila yakuba] Length = 1982 Score = 85.8 bits (211), Expect = 3e-15, Method: Composition-based stats. Identities = 23/150 (15%), Positives = 54/150 (36%), Gaps = 20/150 (13%) Query: 55 KIKALEVIIEK--ANAAPIIVAYHFNSDLARLQ----------KAFPQGRTLDKDPCTIQ 102 K+ L ++++ + +++ L L+ + G T I Sbjct: 1053 KLVLLSKMLKQLKSQNHRVLIFSQMTKMLDILEDFLEGEQYKYERIDGGITGTLRQEAID 1112 Query: 103 EWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 +N + + + G G+NL + ++ + W+ Q +R + G Sbjct: 1113 RFNAPGAQQFVFLLSTRAGGLGINL-ATADTVIIYDSDWNPHNDIQA-----FSRAHRIG 1166 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 V +Y + +N+++E V Q + K + Sbjct: 1167 QANKVMIYRFVTRNSVEERVTQVAKRKMML 1196 >gi|17569817|ref|NP_510140.1| CHromoDomain protein family member (chd-3) [Caenorhabditis elegans] gi|6165993|sp|Q22516|CHD3_CAEEL RecName: Full=Chromodomain-helicase-DNA-binding protein 3 homolog; Short=CHD-3 gi|3875165|emb|CAA91798.1| C. elegans protein T14G8.1, confirmed by transcript evidence [Caenorhabditis elegans] gi|3879819|emb|CAA91810.1| C. elegans protein T14G8.1, confirmed by transcript evidence [Caenorhabditis elegans] gi|11095331|gb|AAG29837.1| CHD-3 [Caenorhabditis elegans] Length = 1787 Score = 85.8 bits (211), Expect = 3e-15, Method: Composition-based stats. Identities = 22/145 (15%), Positives = 49/145 (33%), Gaps = 18/145 (12%) Query: 65 KANAAPIIVAYHFNSDLARL---------QKAFPQGRTLDKDPCT-IQEWNEG--KIPLL 112 K +++ L L + G + I +N K + Sbjct: 953 KDGGHRVLIFSQMTMMLDILEDFCDVEGYKYERIDGSITGQQRQDAIDRYNAPGAKQFVF 1012 Query: 113 FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIA 172 + G G+NL + ++ + W+ Q +R + G K V +Y + Sbjct: 1013 LLSTRAGGLGINL-ATADTVIIYDSDWNPHNDIQA-----FSRAHRLGQKHKVMIYRFVT 1066 Query: 173 QNTIDELVLQRLRTKSTIQDLLLNA 197 + +++E + + K + L++ A Sbjct: 1067 KGSVEERITSVAKKKMLLTHLVVRA 1091 >gi|322699637|gb|EFY91397.1| putative DNA repair protein RAD26 [Metarhizium acridum CQMa 102] Length = 1075 Score = 85.8 bits (211), Expect = 3e-15, Method: Composition-based stats. Identities = 30/137 (21%), Positives = 49/137 (35%), Gaps = 17/137 (12%) Query: 67 NAAPIIVAYHFNSDLARLQKAF---------PQGRTLDKDPCTIQE-WNEGKIP-LLFAH 115 N ++V H L LQ F G ++ + + +N + Sbjct: 567 NGDKVLVFSHSVRLLRILQHLFTSTSYNVSYLDGSLSYEERQDVVDTFNSDPTQFVFLIS 626 Query: 116 PASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNT 175 + G GLN+ N +V W+ Q R + G R V V+ LI+Q T Sbjct: 627 TKAGGVGLNIT-SANKVVIVDPHWNPSYDLQA-----QDRAYRIGQTRDVEVFRLISQGT 680 Query: 176 IDELVLQRLRTKSTIQD 192 ++E+V R K + Sbjct: 681 VEEIVYARQVYKQQQAN 697 >gi|296811676|ref|XP_002846176.1| helicase swr1 [Arthroderma otae CBS 113480] gi|238843564|gb|EEQ33226.1| helicase swr1 [Arthroderma otae CBS 113480] Length = 1652 Score = 85.8 bits (211), Expect = 3e-15, Method: Composition-based stats. Identities = 30/167 (17%), Positives = 62/167 (37%), Gaps = 20/167 (11%) Query: 44 EEKHWKEVHDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAF---------PQGR 92 +K + K++ L+ ++ +A ++ L L++ G Sbjct: 1345 PDKRLLQYDCGKLQQLDKLLRTLQAGGHRALIFTQMTKMLDILEQFLNIHGHRYLRLDGS 1404 Query: 93 TLDKDPCTI-QEWNEG-KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 T + + + +N +I S G G+NL G + ++F+ L W+ +Q +R Sbjct: 1405 TKIEQRQLLTERFNSDTRILAFILSSRSGGLGINLT-GADTVIFYDLDWNPAMDKQCQDR 1463 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTI-DELVLQRLRTKSTIQDLLLN 196 + G R V +Y L + DE + + D +L+ Sbjct: 1464 C-----HRIGQTRDVHIYRLDVGGILGDEELAEGHDEAGAAMDRVLD 1505 >gi|239610082|gb|EEQ87069.1| SNF2 family helicase [Ajellomyces dermatitidis ER-3] Length = 931 Score = 85.8 bits (211), Expect = 3e-15, Method: Composition-based stats. Identities = 37/166 (22%), Positives = 63/166 (37%), Gaps = 26/166 (15%) Query: 42 YDEEKHWKEVHDEKIKALEVIIEKANAAP---IIVAYHFNSDLA--------------RL 84 +E E KI+AL I+ AP +V + S L R+ Sbjct: 747 TNEIDIDPETTSSKIEALLKILTAKGQAPNTKTVVFSQWVSFLDIVEPQLARNGITFARI 806 Query: 85 QKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEH 144 + +D N+ +L A C GLNL N ++ WW Sbjct: 807 DGRMSSAK---RDAAMKALSNDPNCTVLLASLNVCSVGLNL-VAANQVILADSWWAPAIE 862 Query: 145 QQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 Q ++R+ + G KR ++ L+ +N+I++ VL + + K T+ Sbjct: 863 DQAVDRV-----YRLGQKRPTTIWRLVMENSIEDRVLHKQKEKRTL 903 >gi|194744636|ref|XP_001954799.1| GF16563 [Drosophila ananassae] gi|190627836|gb|EDV43360.1| GF16563 [Drosophila ananassae] Length = 884 Score = 85.8 bits (211), Expect = 3e-15, Method: Composition-based stats. Identities = 31/152 (20%), Positives = 64/152 (42%), Gaps = 19/152 (12%) Query: 56 IKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQG--RTLD--------KDPCTIQEWN 105 I+ LE ++ IIV + + + +++ TLD + ++++N Sbjct: 714 IEKLEELLN-GTGDKIIVVSQWITFIGVIRQRLNDLCWSTLDFTGQLSAKERELVLRDFN 772 Query: 106 EGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKR 163 +L ++ G GLNL N ++ L W+ + +Q +RI + G K+ Sbjct: 773 NPNNDKRVLLLSLSAGGVGLNLNV-ANHMLLVDLHWNPQLQKQAQDRI-----YRYGQKK 826 Query: 164 AVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 F+Y + Q T+++ + K I ++L Sbjct: 827 PTFIYRFMCQETVEQRIKALQDYKLEIAKVVL 858 >gi|73946671|ref|XP_850159.1| PREDICTED: similar to SWI/SNF-related matrix-associated actin-dependent regulator of chromatin a2 isoform a isoform 2 [Canis familiaris] Length = 1574 Score = 85.8 bits (211), Expect = 3e-15, Method: Composition-based stats. Identities = 31/160 (19%), Positives = 63/160 (39%), Gaps = 20/160 (12%) Query: 52 HDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAF---------PQGRTLDKDPCT 100 K + L+ I+ +A +++ S + ++ F G T +D Sbjct: 1032 ASGKFELLDRILPKLRATNHRVLLFCQMTSLMTIMEDYFAFRNFLYLRLDGTTKSEDRAA 1091 Query: 101 I-QEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 + +++NE + + + G GLNLQ + +V F W+ + Q R Sbjct: 1092 LLKKFNEPGSQYFIFLLSTRAGGLGLNLQ-AADTVVIFDSDWNPHQDLQA-----QDRAH 1145 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + G + V V L N+++E +L + K + ++ A Sbjct: 1146 RIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQA 1185 >gi|326500828|dbj|BAJ95080.1| predicted protein [Hordeum vulgare subsp. vulgare] Length = 1731 Score = 85.8 bits (211), Expect = 3e-15, Method: Composition-based stats. Identities = 24/147 (16%), Positives = 52/147 (35%), Gaps = 18/147 (12%) Query: 69 APIIVAYHFNSDLARLQKAF---------PQGRTL-DKDPCTIQEWNEG--KIPLLFAHP 116 +++ L L + G T D ++ +N Sbjct: 930 HRVLIFSQMVRMLDILSEYLSLRGFQFQRLDGSTRADLRHQAMEHFNAPGSDDFCFLLST 989 Query: 117 ASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTI 176 + G G+NL + ++ F W+ + Q + R + G + V +Y + ++ Sbjct: 990 RAGGLGINL-ATADTVIIFDSDWNPQNDLQAMSR-----AHRIGQQDTVNIYRFVTCKSV 1043 Query: 177 DELVLQRLRTKSTIQDLLLNALKKETI 203 +E +L+R + K + L++ L E Sbjct: 1044 EEDILERAKKKMVLDHLVIQKLNAEGR 1070 >gi|326468579|gb|EGD92588.1| SNF2 family helicase [Trichophyton tonsurans CBS 112818] Length = 921 Score = 85.8 bits (211), Expect = 3e-15, Method: Composition-based stats. Identities = 35/182 (19%), Positives = 71/182 (39%), Gaps = 24/182 (13%) Query: 27 SKTVKCLQLANGAVYYDEEKHWKEVHDE----KIKALEVIIEK---ANAAPIIVAYHFNS 79 ++ C +L + A E+ + +V + KI+AL I+ A +V + S Sbjct: 718 AEIKDCSELVSPAADLGEDCNQVDVESDTLSSKIQALIKILTAKGQAAGTKTVVFSQWTS 777 Query: 80 DLARLQKAFP-----------QGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYG 128 L ++ + + +D + + + ++ A C GLNL Sbjct: 778 FLDLIEPHLVIHNINFARIDGKMNSAKRDAAMGKFSRDSECTVMLASLNVCSVGLNL-VA 836 Query: 129 GNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKS 188 N +V WW Q ++R+ + G R ++ L+ +N+I++ VL + K Sbjct: 837 ANQVVLADSWWAPAIEDQAVDRV-----YRLGQTRPTTIWRLVMENSIEDRVLDIQKEKR 891 Query: 189 TI 190 + Sbjct: 892 EL 893 >gi|73946635|ref|XP_860206.1| PREDICTED: similar to SWI/SNF-related matrix-associated actin-dependent regulator of chromatin a2 isoform b isoform 16 [Canis familiaris] Length = 1552 Score = 85.8 bits (211), Expect = 3e-15, Method: Composition-based stats. Identities = 31/160 (19%), Positives = 63/160 (39%), Gaps = 20/160 (12%) Query: 52 HDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAF---------PQGRTLDKDPCT 100 K + L+ I+ +A +++ S + ++ F G T +D Sbjct: 1028 ASGKFELLDRILPKLRATNHRVLLFCQMTSLMTIMEDYFAFRNFLYLRLDGTTKSEDRAA 1087 Query: 101 I-QEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 + +++NE + + + G GLNLQ + +V F W+ + Q R Sbjct: 1088 LLKKFNEPGSQYFIFLLSTRAGGLGLNLQ-AADTVVIFDSDWNPHQDLQA-----QDRAH 1141 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + G + V V L N+++E +L + K + ++ A Sbjct: 1142 RIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQA 1181 >gi|307199491|gb|EFN80104.1| Chromodomain-helicase-DNA-binding protein Mi-2-like protein [Harpegnathos saltator] Length = 1948 Score = 85.8 bits (211), Expect = 3e-15, Method: Composition-based stats. Identities = 18/126 (14%), Positives = 45/126 (35%), Gaps = 12/126 (9%) Query: 65 KANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLN 124 + + +++ L L+ + Q++ + + G G+N Sbjct: 1054 RGDGHRVLIFSQMTKMLDILEDYLEGEGYKYERIDGAQQF------VFLLSTRAGGLGIN 1107 Query: 125 LQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRL 184 L + ++ + W+ Q +R + G V +Y + +N+++E V Q Sbjct: 1108 L-ATADTVIIYDSDWNPHNDIQA-----FSRAHRIGQANKVMIYRFVTRNSVEERVTQVA 1161 Query: 185 RTKSTI 190 + K + Sbjct: 1162 KRKMML 1167 >gi|195386402|ref|XP_002051893.1| GJ17250 [Drosophila virilis] gi|194148350|gb|EDW64048.1| GJ17250 [Drosophila virilis] Length = 5552 Score = 85.8 bits (211), Expect = 3e-15, Method: Composition-based stats. Identities = 23/146 (15%), Positives = 53/146 (36%), Gaps = 18/146 (12%) Query: 65 KANAAPIIVAYHFNSDLARLQKAF---------PQGRTL-DKDPCTIQEWNEG--KIPLL 112 KAN +++ L L+ GR + I +++ + Sbjct: 2546 KANGHRVLIFSQMVRCLDILEDYLVYRKYPFERIDGRIRGNLRQEAIDRYSKPGSDRFVF 2605 Query: 113 FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIA 172 + G G+NL + ++ + W+ + Q R + G ++ V +Y L+ Sbjct: 2606 LLCTKAGGLGINLT-AADTVIIYDSDWNPQNDLQAQARC-----HRIGQRKMVKIYRLLC 2659 Query: 173 QNTIDELVLQRLRTKSTIQDLLLNAL 198 +NT + + + K + +L ++ Sbjct: 2660 RNTYEREMFDKASMKLGLDKAVLQSM 2685 >gi|26330021|dbj|BAC28749.1| unnamed protein product [Mus musculus] Length = 1045 Score = 85.8 bits (211), Expect = 3e-15, Method: Composition-based stats. Identities = 19/136 (13%), Positives = 46/136 (33%), Gaps = 18/136 (13%) Query: 67 NAAPIIVAYHFNSDLARLQ----------KAFPQGRTLDKDPCTIQEWNEG--KIPLLFA 114 +++ L L+ + G T + I +N + Sbjct: 810 GGHRVLIFSQMTKMLDLLEDFLEHEGYKYERIDGGITGNMRQEAIDRFNAPGAQQFCFLL 869 Query: 115 HPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQN 174 + G G+NL + ++ + W+ Q +R + G + V +Y + + Sbjct: 870 STRAGGLGINL-ATADTVIIYDSDWNPHNDIQA-----FSRAHRIGQNKKVMIYRFVTRA 923 Query: 175 TIDELVLQRLRTKSTI 190 +++E + Q + K + Sbjct: 924 SVEERITQVAKKKMML 939 >gi|73946659|ref|XP_860605.1| PREDICTED: similar to SWI/SNF-related matrix-associated actin-dependent regulator of chromatin a2 isoform b isoform 27 [Canis familiaris] Length = 1540 Score = 85.8 bits (211), Expect = 3e-15, Method: Composition-based stats. Identities = 31/160 (19%), Positives = 63/160 (39%), Gaps = 20/160 (12%) Query: 52 HDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAF---------PQGRTLDKDPCT 100 K + L+ I+ +A +++ S + ++ F G T +D Sbjct: 1016 ASGKFELLDRILPKLRATNHRVLLFCQMTSLMTIMEDYFAFRNFLYLRLDGTTKSEDRAA 1075 Query: 101 I-QEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 + +++NE + + + G GLNLQ + +V F W+ + Q R Sbjct: 1076 LLKKFNEPGSQYFIFLLSTRAGGLGLNLQ-AADTVVIFDSDWNPHQDLQA-----QDRAH 1129 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + G + V V L N+++E +L + K + ++ A Sbjct: 1130 RIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQA 1169 >gi|326927241|ref|XP_003209801.1| PREDICTED: chromodomain-helicase-DNA-binding protein 9-like [Meleagris gallopavo] Length = 2782 Score = 85.8 bits (211), Expect = 4e-15, Method: Composition-based stats. Identities = 26/146 (17%), Positives = 51/146 (34%), Gaps = 18/146 (12%) Query: 65 KANAAPIIVAYHFNSDLARLQKAFPQGRTL----------DKDPCTIQEWNEGKIP--LL 112 KA +++ L L+ R L + I +++ + Sbjct: 1099 KAGGHKVLIFSQMVRCLDILEDYLIHKRYLYERIDGRVRGNLRQAAIDRFSKPDSDRFVF 1158 Query: 113 FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIA 172 + G G+NL + + F W+ + Q R + G +AV VY LI Sbjct: 1159 LLCTRAGGLGINLT-AADTCIIFDSDWNPQNDLQAQARC-----HRIGQNKAVKVYRLIT 1212 Query: 173 QNTIDELVLQRLRTKSTIQDLLLNAL 198 +N+ + + R K + +L ++ Sbjct: 1213 RNSYEREMFDRASLKLGLDKAVLQSM 1238 >gi|326435418|gb|EGD80988.1| hypothetical protein PTSG_01570 [Salpingoeca sp. ATCC 50818] Length = 1332 Score = 85.8 bits (211), Expect = 4e-15, Method: Composition-based stats. Identities = 29/154 (18%), Positives = 56/154 (36%), Gaps = 18/154 (11%) Query: 44 EEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQE 103 EE + +K L+++++ + R+ P ++ I Sbjct: 943 EEDARVLLFSHSLKLLDIMMDVFRGRGV--------SYLRMDGNMPT----EERQEAINR 990 Query: 104 WNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKR 163 +N G + + + G+ L I++ F W+ E +Q R + G + Sbjct: 991 FNAGTVDVFLLSTKTANTGITLTRANKIVI-FDPSWNPAEDRQAEHRAW-----RIGQNQ 1044 Query: 164 AVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 V V LI+ TI+EL+ R K + + L Sbjct: 1045 DVEVVRLISSGTIEELMYARQLYKQQLAAVALEG 1078 >gi|325181644|emb|CCA16095.1| KIAA1416 protein putative [Albugo laibachii Nc14] Length = 1788 Score = 85.8 bits (211), Expect = 4e-15, Method: Composition-based stats. Identities = 25/149 (16%), Positives = 51/149 (34%), Gaps = 18/149 (12%) Query: 65 KANAAPIIVAYHFNSDLARLQKAF---------PQGRTLDKDPCT-IQEW--NEGKIPLL 112 K +++ L ++ G D + + E K ++ Sbjct: 774 KEGGHKVLIFSQMVRVLDIIEDYLRFLGHAYERLDGNIRGNDRQAAVNRFVKEEYKRFVM 833 Query: 113 FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIA 172 + G GLNL + +V F W+ + Q R + G +V +Y LI Sbjct: 834 LLSTKAGGLGLNLT-AADTVVIFDSDWNPQNDLQAQAR-----AHRIGQTHSVKIYRLIT 887 Query: 173 QNTIDELVLQRLRTKSTIQDLLLNALKKE 201 + T + + + K + +L +++E Sbjct: 888 RKTYEMHMFHKASLKLGLDKAVLTHMRRE 916 >gi|331245961|ref|XP_003335615.1| ISWI chromatin-remodeling complex ATPase ISW2 [Puccinia graminis f. sp. tritici CRL 75-36-700-3] gi|309314605|gb|EFP91196.1| ISWI chromatin-remodeling complex ATPase ISW2 [Puccinia graminis f. sp. tritici CRL 75-36-700-3] Length = 894 Score = 85.8 bits (211), Expect = 4e-15, Method: Composition-based stats. Identities = 31/152 (20%), Positives = 63/152 (41%), Gaps = 18/152 (11%) Query: 65 KANAAPIIVAYHFNSDLARLQ---------KAFPQGRTLDKDP-CTIQEWNE--GKIPLL 112 KA + +++ + L L+ G+T +D I E+N+ + Sbjct: 351 KAKGSRVLIFSQMSRVLDILEDYCFFRQYEYCRIDGQTAHEDRIGAIDEYNKEGSSKFVF 410 Query: 113 FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIA 172 + G G+NL +I+V F W+ + Q ++R + G K+ V+V+ + Sbjct: 411 LLTTRAGGLGINLTT-ADIVVLFDSDWNPQADLQAMDR-----AHRIGQKKQVYVFRFVT 464 Query: 173 QNTIDELVLQRLRTKSTIQDLLLNALKKETIH 204 +N ++E VL+R K + L++ + Sbjct: 465 ENAVEEKVLERAAQKLRLDQLVIQQGRSTVQQ 496 >gi|86171519|ref|XP_966228.1| Smarca-related protein [Plasmodium falciparum 3D7] gi|46361194|emb|CAG25058.1| Smarca-related protein [Plasmodium falciparum 3D7] Length = 2719 Score = 85.8 bits (211), Expect = 4e-15, Method: Composition-based stats. Identities = 28/144 (19%), Positives = 55/144 (38%), Gaps = 18/144 (12%) Query: 65 KANAAPIIVAYHFNSDLARLQ-----KAFPQGRTLDKDPC-----TIQEWNEGK--IPLL 112 +A +++ F L L+ + + R I+E+N + Sbjct: 1090 EAKMHKVLIFTQFQLVLDELEEYCKYRCWKYMRLDGSTNKLIRELDIREFNLSDSIYFIY 1149 Query: 113 FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIA 172 + G G+NL N ++ + W+ Q I+R + G KR V V+ L+ Sbjct: 1150 LISTRAGGLGINLT-AANHVIMYDEDWNPFIDLQAIDR-----AHRIGQKREVNVWKLMT 1203 Query: 173 QNTIDELVLQRLRTKSTIQDLLLN 196 + T++E + R K + L++ Sbjct: 1204 EWTVEERMAFRREQKLKLDKLVVQ 1227 >gi|294656530|ref|XP_002770282.1| DEHA2D07942p [Debaryomyces hansenii CBS767] gi|199431539|emb|CAR65638.1| DEHA2D07942p [Debaryomyces hansenii] Length = 828 Score = 85.8 bits (211), Expect = 4e-15, Method: Composition-based stats. Identities = 26/167 (15%), Positives = 56/167 (33%), Gaps = 23/167 (13%) Query: 45 EKHWKEVHDEKIKALEV----IIEKANAAPIIVAYHFNSDLARLQKAFPQG--------- 91 W+ KI+AL + + IV F S L ++ + Sbjct: 650 GGEWR--SSTKIEALVEELYKLRSDRHTIKSIVFSQFTSMLDLIEWRLKRAGFQTVKLQG 707 Query: 92 --RTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIE 149 +D + + + G LNL + + WW+ Q ++ Sbjct: 708 SMSPQQRDNTIKYFMENTSVEVFLVSLKAGGVALNLCE-ASQVFLMDPWWNPSVEWQSMD 766 Query: 150 RIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 R+ + G KR + + +++I+ +++ K+T+ +N Sbjct: 767 RV-----HRIGQKRPIRITRFCIEDSIESKIIELQEKKATMIHATIN 808 >gi|194899988|ref|XP_001979539.1| GG15997 [Drosophila erecta] gi|190651242|gb|EDV48497.1| GG15997 [Drosophila erecta] Length = 232 Score = 85.8 bits (211), Expect = 4e-15, Method: Composition-based stats. Identities = 24/76 (31%), Positives = 42/76 (55%), Gaps = 7/76 (9%) Query: 131 ILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 +++F+ W+ QQ ++R + G + V VY LI + TI+E +LQR R KS I Sbjct: 1 MVIFYDSDWNPTVDQQAMDR-----AHRLGQTKQVTVYRLICKGTIEERILQRAREKSEI 55 Query: 191 QDLLLNA--LKKETIH 204 Q ++++ K +T+ Sbjct: 56 QRMVISGGNFKPDTLK 71 >gi|148227774|ref|NP_001080504.1| chromodomain helicase DNA binding protein 4 [Xenopus laevis] gi|28422180|gb|AAH46866.1| B230399n07 protein [Xenopus laevis] Length = 1893 Score = 85.8 bits (211), Expect = 4e-15, Method: Composition-based stats. Identities = 24/150 (16%), Positives = 54/150 (36%), Gaps = 20/150 (13%) Query: 55 KIKALEVIIEKA--NAAPIIVAYHFNSDLARLQ----------KAFPQGRTLDKDPCTIQ 102 K+ L+ ++ K + +++ L L+ + G T + I Sbjct: 1042 KLFLLQKMLRKLKDDGHRVLIFSQMTKMLDLLEDFMEHEGYKYERIDGGITGNMRQEAID 1101 Query: 103 EWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 +N + + G G+NL + +V + W+ Q +R + G Sbjct: 1102 RFNAPGAQQFCFLLSTRAGGLGINL-ATADTVVIYDSDWNPHNDIQA-----FSRAHRIG 1155 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 R V +Y + + +++E + Q + K + Sbjct: 1156 QNRKVMIYRFVTRASVEERITQVAKKKMML 1185 >gi|73946623|ref|XP_859981.1| PREDICTED: similar to SWI/SNF-related matrix-associated actin-dependent regulator of chromatin a2 isoform b isoform 10 [Canis familiaris] Length = 1456 Score = 85.8 bits (211), Expect = 4e-15, Method: Composition-based stats. Identities = 31/160 (19%), Positives = 63/160 (39%), Gaps = 20/160 (12%) Query: 52 HDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAF---------PQGRTLDKDPCT 100 K + L+ I+ +A +++ S + ++ F G T +D Sbjct: 932 ASGKFELLDRILPKLRATNHRVLLFCQMTSLMTIMEDYFAFRNFLYLRLDGTTKSEDRAA 991 Query: 101 I-QEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 + +++NE + + + G GLNLQ + +V F W+ + Q R Sbjct: 992 LLKKFNEPGSQYFIFLLSTRAGGLGLNLQ-AADTVVIFDSDWNPHQDLQA-----QDRAH 1045 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + G + V V L N+++E +L + K + ++ A Sbjct: 1046 RIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQA 1085 >gi|328768354|gb|EGF78401.1| hypothetical protein BATDEDRAFT_90880 [Batrachochytrium dendrobatidis JAM81] Length = 1225 Score = 85.8 bits (211), Expect = 4e-15, Method: Composition-based stats. Identities = 29/159 (18%), Positives = 58/159 (36%), Gaps = 25/159 (15%) Query: 54 EKIKALEV-IIE-----KANAAPI--IVAYHFNSDLARLQ-----------KAFPQGRTL 94 KI AL +IE KA+ P+ ++ + L+ ++ K + Sbjct: 994 TKIIALIDSLIEVRSQTKASDLPVKSVIFSQWTKMLSLIEGPLLTHGFKFCKLVGKMVLS 1053 Query: 95 DKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 + ++ + + ++ S G GLNL + + +W+ QQ I+R+ Sbjct: 1054 SRSEAMLKFKTDPSVTIMLISLRSGGVGLNLT-AASRVYLMEPYWNPAVEQQAIDRV--- 1109 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDL 193 + G V I + +I+E + R K + Sbjct: 1110 --HRMGQTLPVVSIRFIVKGSIEENIQALQRKKLEMAKA 1146 >gi|320169022|gb|EFW45921.1| chromodomain-helicase-DNA-binding protein 7 [Capsaspora owczarzaki ATCC 30864] Length = 2669 Score = 85.8 bits (211), Expect = 4e-15, Method: Composition-based stats. Identities = 28/205 (13%), Positives = 72/205 (35%), Gaps = 33/205 (16%) Query: 8 QRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKAN 67 + ++ ++ G N + + A+ + +Q + V D + +K L N Sbjct: 1204 EEKILGEIYGPNFYSTSPATLLLTLIQASGKLVLID----------KLLKRLRE-----N 1248 Query: 68 AAPIIVAYHFNSDLARLQ----------KAFPQGRTLDKDPCTIQEWNEG--KIPLLFAH 115 +++ L LQ + G + I +++ + Sbjct: 1249 GHKVLIFSQMVRCLDILQDYLTAMQYKFERIDGGIRGEARQAAIDRFSKPGSDSFVFLLC 1308 Query: 116 PASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNT 175 + G G+NL + ++ + W+ + Q R + G ++V +Y L+ +N+ Sbjct: 1309 TRAGGVGINLT-AADTVIIYDSDWNPQNDLQAQARC-----HRIGQTKSVKIYRLLTRNS 1362 Query: 176 IDELVLQRLRTKSTIQDLLLNALKK 200 + + + K + +L ++ Sbjct: 1363 YEREMFDKASMKLGLDQAVLQNIQS 1387 >gi|315045788|ref|XP_003172269.1| DNA repair protein RAD16 [Arthroderma gypseum CBS 118893] gi|311342655|gb|EFR01858.1| DNA repair protein RAD16 [Arthroderma gypseum CBS 118893] Length = 946 Score = 85.8 bits (211), Expect = 4e-15, Method: Composition-based stats. Identities = 29/168 (17%), Positives = 57/168 (33%), Gaps = 21/168 (12%) Query: 51 VHDEKIKALE-VIIEKANAA---PIIVAYHFNSDLA----RLQKAFPQGRTLDKDPCTIQ 102 KI+ L + + + IV F S L RL +A LD +Q Sbjct: 770 TSSTKIEMLVYDLYKLRSKKRTNKSIVFSQFTSMLQLVEWRLHRAGISTVMLDGSMSPVQ 829 Query: 103 EW-------NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTR 155 N + + G LNL + + WW+ Q +R Sbjct: 830 RQRSIDYFMNNVDTEVFLVSLKAGGVALNLTEASRVFI-VDPWWNPAAEWQSADRC---- 884 Query: 156 QRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETI 203 + G +R + L +++++ ++ K+ + + +N + E + Sbjct: 885 -HRIGQRRPCVITRLCIEDSVESRMVLLQEKKANMINGTINKDQSEAL 931 >gi|193848542|gb|ACF22729.1| putative SWI/SNF related protein [Brachypodium distachyon] Length = 578 Score = 85.8 bits (211), Expect = 4e-15, Method: Composition-based stats. Identities = 27/140 (19%), Positives = 55/140 (39%), Gaps = 18/140 (12%) Query: 69 APIIVAYHFNSDLARL---------QKAFPQGRTLDKD-PCTIQEWNEGKIP--LLFAHP 116 + +++ L L Q G T D I+ +N+ + + Sbjct: 50 SRVLIFSQMTRLLDILEDYLMYKGYQYCRIDGSTGGDDCDAFIEAFNKPESEKFIFLLST 109 Query: 117 ASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTI 176 + G G+NL +I++ + W+ + Q R + G K+ V V+ ++TI Sbjct: 110 RAGGLGINLTT-ADIVIIYDSDWNPQVDLQA-----QDRAHRIGQKKEVQVFRFCTEDTI 163 Query: 177 DELVLQRLRTKSTIQDLLLN 196 +E V++R K + L++ Sbjct: 164 EEKVIERAYKKLVLDALVIQ 183 >gi|221483589|gb|EEE21901.1| transcription regulatory protein SNF2, putative [Toxoplasma gondii GT1] Length = 1628 Score = 85.8 bits (211), Expect = 4e-15, Method: Composition-based stats. Identities = 31/186 (16%), Positives = 74/186 (39%), Gaps = 23/186 (12%) Query: 29 TVKCLQLANGAVYYDEEKHWKEVHDE---KIKALEVIIEKA--NAAPIIVAYHFNSDLAR 83 ++ ++AN + +E E K + L+ ++ K +++ L Sbjct: 980 LMQLRKIANHPYLFVDEYLVNEDLVRVAGKFECLDRMLPKLLHFKHKVLIFSQMTQVLDL 1039 Query: 84 LQKAF-----PQGRT-----LDKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNI 131 + + R L + ++E+N ++ + + G GLNLQ + Sbjct: 1040 MAEYMHLRGYKYARLDGSVGLTERKERMEEFNNAEVDTMIFMLSTRAGGLGLNLQ-AADT 1098 Query: 132 LVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQ 191 +V F ++ + Q + R + G + V V+ L+ + ++E++L++ K I Sbjct: 1099 VVLFDSDFNPHQDLQAM-----CRAHRLGQTKQVKVFRLVTISGVEEIILEKANRKLNID 1153 Query: 192 DLLLNA 197 +++ A Sbjct: 1154 QMVIQA 1159 >gi|206600048|ref|YP_002242122.1| gp65 [Mycobacterium phage Konstantine] gi|206287136|gb|ACI12481.1| gp65 [Mycobacterium phage Konstantine] Length = 685 Score = 85.8 bits (211), Expect = 4e-15, Method: Composition-based stats. Identities = 35/215 (16%), Positives = 76/215 (35%), Gaps = 26/215 (12%) Query: 2 KQYHKFQRELYCDL-QGENIEAFNSASKTVKCLQLANGAVYYD------EEKHWKEVHDE 54 KQY + +RE ++ + I ++ +C Q+AN + D + K Sbjct: 433 KQYREIEREALINIGSEDEITVNGVLAEMTRCKQIANSCLQADGFNAMGDVKVRPIFPSN 492 Query: 55 KIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQ-----------GRTLDKDPCTI 101 K + + + +N IVA F L L + + + ++ Sbjct: 493 KADWIYDFLSERISNGTKTIVASQFTGFLNVLSEELKKKGVGHYLYTGATQEPERKRIRK 552 Query: 102 QEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGF 161 + +E ++ + S G L L ++++ W ++ +Q+ +R + Sbjct: 553 EFQSESGEMVVLLNTKSGGVSLTLDLADDVII-VDQTWIPDDQEQVEDR-----AHRVSR 606 Query: 162 KRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 V ++ L + TIDE + + +L Sbjct: 607 NHNVTIWNLASLGTIDEDIAVLNNERGEAISSILE 641 >gi|164448642|ref|NP_001106734.1| chromodomain-helicase-DNA-binding protein 1 [Bombyx mori] gi|269969346|sp|A9X4T1|CHD1_BOMMO RecName: Full=Chromodomain-helicase-DNA-binding protein 1; Short=CHD-1; AltName: Full=ATP-dependent helicase CHD1 gi|89213694|gb|ABD64154.1| CHD1 [Bombyx mori] Length = 1365 Score = 85.8 bits (211), Expect = 4e-15, Method: Composition-based stats. Identities = 36/224 (16%), Positives = 74/224 (33%), Gaps = 40/224 (17%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEV 61 K Y ++ ++G N + KC N A+ E A+E Sbjct: 456 KNYSALRKG----VKGSINTFINIVIELKKC---CNHALLTKPEDFESRASLATSDAVEK 508 Query: 62 IIEKAN---------------AAPIIVAYHFNSDLARL-----QKAFPQGRTLDK----- 96 ++ + +++ L L ++ FP R Sbjct: 509 LLRGSGKLLLLDKLLCRLKETGHRVLIFSQMVRMLDILAEYLQRRHFPFQRLDGSIKGEL 568 Query: 97 DPCTIQEWN-EGKIPL-LFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 + +N EG + G G+NL + ++ F W+ + Q R Sbjct: 569 RKQALDHFNAEGSQDFCFLLSTRAGGLGINL-ATADTVIIFDSDWNPQNDLQAQAR---- 623 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNAL 198 + G K V +Y L+ +++E +++R + K + L++ + Sbjct: 624 -AHRIGQKNQVNIYRLVTARSVEEDIVERAKRKMVLDHLVIQRM 666 >gi|118096298|ref|XP_414088.2| PREDICTED: similar to chromatin remodeling factor CHROM1 [Gallus gallus] Length = 2891 Score = 85.8 bits (211), Expect = 4e-15, Method: Composition-based stats. Identities = 26/146 (17%), Positives = 51/146 (34%), Gaps = 18/146 (12%) Query: 65 KANAAPIIVAYHFNSDLARLQKAFPQGRTL----------DKDPCTIQEWNEGKIP--LL 112 KA +++ L L+ R L + I +++ + Sbjct: 1192 KAGGHKVLIFSQMVRCLDILEDYLIHKRYLYERIDGRVRGNLRQAAIDRFSKPDSDRFVF 1251 Query: 113 FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIA 172 + G G+NL + + F W+ + Q R + G +AV VY LI Sbjct: 1252 LLCTRAGGLGINLT-AADTCIIFDSDWNPQNDLQAQARC-----HRIGQNKAVKVYRLIT 1305 Query: 173 QNTIDELVLQRLRTKSTIQDLLLNAL 198 +N+ + + R K + +L ++ Sbjct: 1306 RNSYEREMFDRASLKLGLDKAVLQSM 1331 >gi|315051734|ref|XP_003175241.1| chromatin-remodeling complex ATPase chain isw-1 [Arthroderma gypseum CBS 118893] gi|311340556|gb|EFQ99758.1| chromatin-remodeling complex ATPase chain isw-1 [Arthroderma gypseum CBS 118893] Length = 945 Score = 85.8 bits (211), Expect = 4e-15, Method: Composition-based stats. Identities = 29/138 (21%), Positives = 49/138 (35%), Gaps = 17/138 (12%) Query: 66 ANAAPIIVAYHFNSDLARLQKAF----------PQGRTLDKDPCTIQEWN-EGKIPLLFA 114 AN ++V H L LQ F + + + +N + + + Sbjct: 558 ANGDKVLVFSHNVRLLKMLQMLFNHTSYNVSYLDGSMSYEDRSNVVNAFNSDPRQFVFLI 617 Query: 115 HPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQN 174 + G GLN+ N +V W+ Q R + G R V V+ L++ Sbjct: 618 STKAGGVGLNIT-SANKVVVVDPNWNPAYDLQA-----QDRAYRIGQLRDVEVFRLVSAG 671 Query: 175 TIDELVLQRLRTKSTIQD 192 TI+E+V R K + Sbjct: 672 TIEEIVYARQIYKQQQAN 689 >gi|114558334|ref|XP_001157776.1| PREDICTED: hypothetical protein isoform 3 [Pan troglodytes] Length = 783 Score = 85.8 bits (211), Expect = 4e-15, Method: Composition-based stats. Identities = 35/217 (16%), Positives = 79/217 (36%), Gaps = 35/217 (16%) Query: 1 MKQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDE--------EKHWKEVH 52 MK F+ E + ++ N S+ KC + +D H E Sbjct: 182 MKDLDAFENET-----AKKVKLQNILSQLRKC---VDHPYLFDGVEPEPFEVGDHLIE-A 232 Query: 53 DEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAFP---------QGRTLDKDPC-T 100 K+ L+ ++ + +++ L LQ G ++ Sbjct: 233 SGKLHLLDKLLAFLYSGGHRVLLFSQMTQMLDILQDYMDYRGYSYERVDGSVRGEERHLA 292 Query: 101 IQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 I+ + I + + G G+NL + ++F ++ + Q R + G Sbjct: 293 IKNFGRQPIFVFLLSTRAGGVGMNLT-AADTVIFVDSDFNPQNDLQAAAR-----AHRIG 346 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 ++V V LI ++T++E+V ++ +K + ++++ Sbjct: 347 QNKSVKVIRLIGRDTVEEIVYRKAASKLQLTNMIIEG 383 >gi|73946627|ref|XP_860059.1| PREDICTED: similar to SWI/SNF-related matrix-associated actin-dependent regulator of chromatin a2 isoform b isoform 12 [Canis familiaris] Length = 1549 Score = 85.8 bits (211), Expect = 4e-15, Method: Composition-based stats. Identities = 31/160 (19%), Positives = 63/160 (39%), Gaps = 20/160 (12%) Query: 52 HDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAF---------PQGRTLDKDPCT 100 K + L+ I+ +A +++ S + ++ F G T +D Sbjct: 1025 ASGKFELLDRILPKLRATNHRVLLFCQMTSLMTIMEDYFAFRNFLYLRLDGTTKSEDRAA 1084 Query: 101 I-QEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 + +++NE + + + G GLNLQ + +V F W+ + Q R Sbjct: 1085 LLKKFNEPGSQYFIFLLSTRAGGLGLNLQ-AADTVVIFDSDWNPHQDLQA-----QDRAH 1138 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + G + V V L N+++E +L + K + ++ A Sbjct: 1139 RIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQA 1178 >gi|310793696|gb|EFQ29157.1| SNF2 family domain-containing protein [Glomerella graminicola M1.001] Length = 1569 Score = 85.8 bits (211), Expect = 4e-15, Method: Composition-based stats. Identities = 38/216 (17%), Positives = 75/216 (34%), Gaps = 38/216 (17%) Query: 17 GENIEAFNSASKTVKCLQL---ANGAVYYDEEKHWKEVHDEKIKALEVIIEKAN------ 67 + I + S +QL Y E + + KI + +I + Sbjct: 1094 DDKINKRDRGSLNNILMQLRKCLCHPFMYSEAVEERSLDPVKIH--QNLISASGKLMLLN 1151 Query: 68 ---------AAPIIVAYHFNSDLARLQKAFP----QGRTLD------KDPCTIQEWNEG- 107 +++ F L ++ Q R LD + I +NE Sbjct: 1152 IMLPKLKERGHRVLIFSQFLDQLDIMEDFLNGLGFQHRRLDGKINSLEKQKHIDAFNEPG 1211 Query: 108 -KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVF 166 +I + G G+NL + ++ ++ + Q I R + G K V Sbjct: 1212 SEIFAFLLSTRAGGVGINL-ATADTVIILDPDFNPHQDIQAISR-----AHRIGQKNKVL 1265 Query: 167 VYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKET 202 + L+ +N+ +E ++Q R K + +L+ A+ +E Sbjct: 1266 CFQLMTKNSAEEKIMQIGRKKMALDHVLIEAMDEEG 1301 >gi|189199742|ref|XP_001936208.1| DNA repair protein rad5 [Pyrenophora tritici-repentis Pt-1C-BFP] gi|187983307|gb|EDU48795.1| DNA repair protein rad5 [Pyrenophora tritici-repentis Pt-1C-BFP] Length = 1026 Score = 85.8 bits (211), Expect = 4e-15, Method: Composition-based stats. Identities = 35/158 (22%), Positives = 55/158 (34%), Gaps = 23/158 (14%) Query: 53 DEKIKAL-----EVIIEKANAAPIIVAYHFNSDLARL-----QKAFPQGRTLDKDPCTIQ 102 K +AL + E+ NA + V F S L + + P R ++ Sbjct: 855 SAKTQALLGHLKKTRKEEPNAKTV-VFSQFTSFLDLIEPALTRDHIPFLRFDGSISQKVR 913 Query: 103 EW------NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 + +L + G GLNL N + WW Q I+R+ Sbjct: 914 AQILTEFTTSPRPYVLLLSLRAGGVGLNLTC-ANKVFMMDPWWSFAVEAQAIDRV----- 967 Query: 157 RQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 + G +R V V Q +I+E +L+ K I L Sbjct: 968 HRMGQEREVKVVRFCVQGSIEEKMLRIQERKKFIASSL 1005 >gi|154302623|ref|XP_001551721.1| hypothetical protein BC1G_09888 [Botryotinia fuckeliana B05.10] gi|150855377|gb|EDN30569.1| hypothetical protein BC1G_09888 [Botryotinia fuckeliana B05.10] Length = 1025 Score = 85.8 bits (211), Expect = 4e-15, Method: Composition-based stats. Identities = 31/146 (21%), Positives = 54/146 (36%), Gaps = 17/146 (11%) Query: 67 NAAPIIVAYHFNSDLARLQK---------AFPQGRTLDKDPCT-IQEWN-EGKIPLLFAH 115 +++ H L LQ +F G +D + ++N + + Sbjct: 629 EGDKVLIFSHSVKLLRMLQHLFQSTSYNVSFLSGEMKYEDRQDTVDDFNSDPNQFIFLIS 688 Query: 116 PASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNT 175 + G GLN+ N +V F W+ Q R + G R V + L++ T Sbjct: 689 TKAGGVGLNIT-SANKVVIFDPNWNPSYDLQA-----QDRAYRIGQHRDVDSFRLVSAGT 742 Query: 176 IDELVLQRLRTKSTIQDLLLNALKKE 201 I+E+V R K ++ NA K+ Sbjct: 743 IEEVVYARQIYKQQQANIGYNASKER 768 >gi|114625715|ref|XP_528720.2| PREDICTED: RAD26L hypothetical protein [Pan troglodytes] Length = 776 Score = 85.8 bits (211), Expect = 4e-15, Method: Composition-based stats. Identities = 33/152 (21%), Positives = 61/152 (40%), Gaps = 19/152 (12%) Query: 53 DEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQK---------AFPQGRTLDKDP-CT 100 K+K L+ ++ + N +++ L LQ+ G T ++ Sbjct: 582 SGKMKVLQQLLNHCRINRDKVLLFSFSTKLLDVLQQYCMASGLDYRRLDGSTKSEERLKI 641 Query: 101 IQEWNE-GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQA 159 ++E+N + + + G GLN G N++V F W+ Q I+R + Sbjct: 642 VKEFNSTQDVNICLVSTMAGGLGLNF-VGANVVVLFDPTWNPANDLQAIDR-----AYRI 695 Query: 160 GFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQ 191 G R V V LI+ T++E++ R K + Sbjct: 696 GQCRDVKVLRLISLGTVEEIMYLRQIYKQQLH 727 >gi|62898724|dbj|BAD97216.1| chromodomain helicase DNA binding protein 1-like variant [Homo sapiens] Length = 702 Score = 85.8 bits (211), Expect = 4e-15, Method: Composition-based stats. Identities = 34/216 (15%), Positives = 80/216 (37%), Gaps = 33/216 (15%) Query: 1 MKQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYD-------EEKHWKEVHD 53 MK F+ E + ++ N S+ KC + +D E Sbjct: 199 MKDLDAFENET-----AKKVKLQNILSQLRKC---VDHPYLFDGVEPEPFEVGDHLTEAS 250 Query: 54 EKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAFP---------QGRTLDKDPC-TI 101 K+ L+ ++ + +++ L LQ G ++ I Sbjct: 251 GKLHLLDKLLAFLYSGGHRVLLFSQMTQMLDILQDYMDYRGYSYERVDGSVRGEERHLAI 310 Query: 102 QEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGF 161 + + + I + + G G+NL + ++F ++ ++ Q R + G Sbjct: 311 KNFGQQPIFVFLLSTRAGGVGMNLT-AADTVIFVDSDFNPQDDLQAAAR-----AHRIGQ 364 Query: 162 KRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 ++V V LI ++T++E+V ++ +K + ++++ Sbjct: 365 NKSVKVIRLIGRDTVEEIVYRKAASKLQLTNMIIEG 400 >gi|293351605|ref|XP_220602.5| PREDICTED: chromodomain helicase DNA binding protein 3 [Rattus norvegicus] Length = 2047 Score = 85.8 bits (211), Expect = 4e-15, Method: Composition-based stats. Identities = 24/160 (15%), Positives = 52/160 (32%), Gaps = 20/160 (12%) Query: 45 EKHWKEVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQ----------KAFPQGR 92 E K+ L+ ++ K +++ L L+ + G Sbjct: 1129 EGGALIKSSGKLLLLQKMLRKLKEQGHRVLIFSQMTKMLDLLEDFLDYEGYKYERIDGGI 1188 Query: 93 TLDKDPCTIQEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 T I +N + + G G+NL + ++ F W+ Q Sbjct: 1189 TGALRQEAIDRFNAPGAQQFCFLLSTRAGGLGINL-ATADTVIIFDSDWNPHNDIQA--- 1244 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 +R + G V +Y + + +++E + Q + K + Sbjct: 1245 --FSRAHRIGQANKVMIYRFVTRASVEERITQVAKRKMML 1282 >gi|242010568|ref|XP_002426037.1| conserved hypothetical protein [Pediculus humanus corporis] gi|212510047|gb|EEB13299.1| conserved hypothetical protein [Pediculus humanus corporis] Length = 853 Score = 85.8 bits (211), Expect = 4e-15, Method: Composition-based stats. Identities = 28/157 (17%), Positives = 58/157 (36%), Gaps = 19/157 (12%) Query: 51 VHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLA------RLQKA----FPQGRTLDKDP 98 V K + L+ ++ K +++ F L R++ + Sbjct: 665 VKSGKFQKLDEMLPKLKEENHRVLIFSQFVIMLDVMEEYLRIRGHKYLRLDGSTQVIIRQ 724 Query: 99 CTIQEWNEGK-IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 I +NE I + + G G+NL +++ + ++ +Q +R Sbjct: 725 ELIDAFNEDSSIFVFILSTRAGGLGINLTAADTVIIH-DMDFNPYNDKQAEDRC-----H 778 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 + G + V VY I +NTI+E + Q K ++ + Sbjct: 779 RVGQTKPVSVYKFIGKNTIEENIHQVALEKLNLEKKI 815 >gi|124358950|ref|NP_666131.2| chromodomain helicase DNA binding protein 3 [Mus musculus] Length = 2021 Score = 85.8 bits (211), Expect = 4e-15, Method: Composition-based stats. Identities = 24/160 (15%), Positives = 52/160 (32%), Gaps = 20/160 (12%) Query: 45 EKHWKEVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQ----------KAFPQGR 92 E K+ L+ ++ K +++ L L+ + G Sbjct: 1103 EGGALIKSSGKLLLLQKMLRKLKEQGHRVLIFSQMTKMLDLLEDFLDYEGYKYERIDGGI 1162 Query: 93 TLDKDPCTIQEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 T I +N + + G G+NL + ++ F W+ Q Sbjct: 1163 TGALRQEAIDRFNAPGAQQFCFLLSTRAGGLGINL-ATADTVIIFDSDWNPHNDIQA--- 1218 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 +R + G V +Y + + +++E + Q + K + Sbjct: 1219 --FSRAHRIGQANKVMIYRFVTRASVEERITQVAKRKMML 1256 >gi|159109590|ref|XP_001705059.1| Transcriptional regulator ATRX, putative [Giardia lamblia ATCC 50803] gi|157433137|gb|EDO77385.1| Transcriptional regulator ATRX, putative [Giardia lamblia ATCC 50803] Length = 1367 Score = 85.8 bits (211), Expect = 4e-15, Method: Composition-based stats. Identities = 39/176 (22%), Positives = 62/176 (35%), Gaps = 20/176 (11%) Query: 42 YDEEKHWKEVHDEKIKALEVIIE--KANAAPIIVAYHFN---SDLAR------LQKAFPQ 90 YD K +I K N ++ + S L + Sbjct: 645 YDLTVRSITALSSKYSLFMELITHIKNNNHRALIFCDYQIIFSMLEHLLSHNDIPYLRLD 704 Query: 91 GRTLDKDPCTI--QEWNEGK-IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQM 147 G D + +N K L GLNL G N ++ F+ W L+ +Q Sbjct: 705 GTIADVSERDRICKSFNANKRYTALLISIKLGSMGLNLT-GANRVILFAPAWSLQVEEQA 763 Query: 148 IERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETI 203 I R + G K V VY L NT++E ++ R K+ I ++ L+ K ++ Sbjct: 764 IAR-----AYRMGQKHNVVVYKLACINTLEEKMVVRQLQKAGIANVTLDDEKHRSV 814 >gi|324501030|gb|ADY40465.1| Transcription termination factor 2 [Ascaris suum] Length = 1277 Score = 85.8 bits (211), Expect = 4e-15, Method: Composition-based stats. Identities = 35/165 (21%), Positives = 65/165 (39%), Gaps = 20/165 (12%) Query: 53 DEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQKAFPQ---------GRTLDKDPCT- 100 K+ AL +++A ++ + S L ++ Q G+ L KD Sbjct: 1071 SAKLVALFERLDQALALGDKCVIVSQWTSLLDIVEYHLKQRDVQYTSITGKVLTKDRQPR 1130 Query: 101 IQEWNE--GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQ 158 ++ +N G ++ + G GGN L L W+ QQ +RI + Sbjct: 1131 VESFNRVGGGARVMLLSL-TAGGVGLNLVGGNHLFLIDLHWNPALEQQACDRI-----YR 1184 Query: 159 AGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETI 203 G + VF++ +I TI+E VL ++K + +L + + Sbjct: 1185 MGQTKEVFIHKIICLGTIEERVLTLQQSKMALAKGVLEGAASKKL 1229 >gi|81884744|sp|Q6DIC0|SMCA2_MOUSE RecName: Full=Probable global transcription activator SNF2L2; AltName: Full=ATP-dependent helicase SMARCA2; AltName: Full=BRG1-associated factor 190B; Short=BAF190B; AltName: Full=Protein brahma homolog; AltName: Full=SNF2-alpha; AltName: Full=SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2 gi|49523317|gb|AAH75641.1| Smarca2 protein [Mus musculus] Length = 1577 Score = 85.8 bits (211), Expect = 4e-15, Method: Composition-based stats. Identities = 31/160 (19%), Positives = 63/160 (39%), Gaps = 20/160 (12%) Query: 52 HDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAF---------PQGRTLDKDPCT 100 K + L+ I+ +A +++ S + ++ F G T +D Sbjct: 1053 ASGKFELLDRILPKLRATNHRVLLFCQMTSLMTIMEDYFAFRNFLYLRLDGTTKSEDRAA 1112 Query: 101 I-QEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 + +++NE + + + G GLNLQ + +V F W+ + Q R Sbjct: 1113 LLKKFNEPGSQYFIFLLSTRAGGLGLNLQ-AADTVVIFDSDWNPHQDLQA-----QDRAH 1166 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + G + V V L N+++E +L + K + ++ A Sbjct: 1167 RIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQA 1206 >gi|73946663|ref|XP_860667.1| PREDICTED: similar to SWI/SNF-related matrix-associated actin-dependent regulator of chromatin a2 isoform b isoform 29 [Canis familiaris] Length = 1547 Score = 85.8 bits (211), Expect = 4e-15, Method: Composition-based stats. Identities = 31/160 (19%), Positives = 63/160 (39%), Gaps = 20/160 (12%) Query: 52 HDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAF---------PQGRTLDKDPCT 100 K + L+ I+ +A +++ S + ++ F G T +D Sbjct: 1023 ASGKFELLDRILPKLRATNHRVLLFCQMTSLMTIMEDYFAFRNFLYLRLDGTTKSEDRAA 1082 Query: 101 I-QEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 + +++NE + + + G GLNLQ + +V F W+ + Q R Sbjct: 1083 LLKKFNEPGSQYFIFLLSTRAGGLGLNLQ-AADTVVIFDSDWNPHQDLQA-----QDRAH 1136 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + G + V V L N+++E +L + K + ++ A Sbjct: 1137 RIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQA 1176 >gi|73946419|ref|XP_533502.2| PREDICTED: similar to RAD26L hypothetical protein [Canis familiaris] Length = 1402 Score = 85.8 bits (211), Expect = 4e-15, Method: Composition-based stats. Identities = 34/152 (22%), Positives = 62/152 (40%), Gaps = 19/152 (12%) Query: 53 DEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQK---------AFPQGRTLDKDP-CT 100 K+K L+ ++ + N I++ L LQ+ G T ++ Sbjct: 502 SGKMKVLQQLLNHCRKNKDKILLFSFSTKLLDVLQQYCMAAGFDYRRLDGSTKSEERIKI 561 Query: 101 IQEWNE-GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQA 159 ++E+N + + + G GLN G N++V F W+ Q I+R + Sbjct: 562 VKEFNSTQDVNICLVSTMAGGVGLNF-VGANVVVLFDPTWNPANDLQAIDR-----AYRI 615 Query: 160 GFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQ 191 G R V V+ LI+ T++E++ R K + Sbjct: 616 GQCRDVKVFRLISLGTVEEIMYLRQVYKQQLH 647 >gi|70568940|dbj|BAE06321.1| ATRX protein [Ciona intestinalis] Length = 1086 Score = 85.8 bits (211), Expect = 4e-15, Method: Composition-based stats. Identities = 32/205 (15%), Positives = 71/205 (34%), Gaps = 23/205 (11%) Query: 5 HKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVII- 63 + E ++ + K L + + ++ + +E I+ Sbjct: 635 KELWFEKVMPSDNLLYDSVEMSGKITLLLSILKSSTMMGDKVVLFSQSLLTLDLIEDILR 694 Query: 64 ------EKANAAP--IIVAYHFNS-DLARLQKAFPQGRTLDKDPCTIQEWNEG---KIPL 111 +P + + + D R+ + ++ I ++N + L Sbjct: 695 YVTMDGSDNTRSPTGVRIMKWYKDVDYYRMDGSTKN----ERRKTIIDQFNNESDTRCRL 750 Query: 112 LFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLI 171 + + G G+NL G N + F W+ Q I RI + G + ++Y I Sbjct: 751 MLVSTRAGGIGINL-VGANRAIVFDASWNPTHDVQSIFRI-----YRFGQTKPCYIYRFI 804 Query: 172 AQNTIDELVLQRLRTKSTIQDLLLN 196 AQ T++E + R K ++ +++ Sbjct: 805 AQGTMEEKIYDRQVVKQSLASRVVD 829 >gi|317026301|ref|XP_001389337.2| chromatin remodeling complex subunit (Chd3) [Aspergillus niger CBS 513.88] Length = 1282 Score = 85.8 bits (211), Expect = 4e-15, Method: Composition-based stats. Identities = 27/162 (16%), Positives = 62/162 (38%), Gaps = 20/162 (12%) Query: 54 EKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQKAFPQGRTLD----------KDPCTI 101 K + LE+++ K +++ F +L ++ + TI Sbjct: 744 AKFQLLELMLPKLKNRGHRVLIFSQFLENLDIIEDFLEGVGLTYLRLDGRMSSLEKQKTI 803 Query: 102 QEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQA 159 +N + P S G G+NL + ++ ++ + Q + R + Sbjct: 804 DAYNAEESPYFAFLLSTRSGGVGINL-ATADTVIIMDPDFNPHQDMQALSR-----AHRI 857 Query: 160 GFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 G K V V+ L+ + + +E ++Q + K + +L++ + E Sbjct: 858 GQKNKVLVFQLMTRASAEEKIMQIGKKKMVLDHVLIDRMVSE 899 >gi|195497929|ref|XP_002096309.1| GE25130 [Drosophila yakuba] gi|194182410|gb|EDW96021.1| GE25130 [Drosophila yakuba] Length = 282 Score = 85.8 bits (211), Expect = 4e-15, Method: Composition-based stats. Identities = 24/75 (32%), Positives = 41/75 (54%), Gaps = 7/75 (9%) Query: 132 LVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQ 191 ++F+ W+ QQ ++R + G + V VY LI + TI+E +LQR R KS IQ Sbjct: 3 VIFYDSDWNPTVDQQAMDR-----AHRLGQTKQVTVYRLICKGTIEERILQRAREKSEIQ 57 Query: 192 DLLLNA--LKKETIH 204 ++++ K +T+ Sbjct: 58 RMVISGGNFKPDTLK 72 >gi|74007793|ref|XP_549075.2| PREDICTED: similar to excision repair cross-complementing rodent repair deficiency complementation group 6 - like [Canis familiaris] Length = 1268 Score = 85.8 bits (211), Expect = 4e-15, Method: Composition-based stats. Identities = 25/152 (16%), Positives = 49/152 (32%), Gaps = 20/152 (13%) Query: 53 DEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQK-----AFPQGRTLDKDPCTIQE-- 103 K+ L ++ + +V L +++ F R ++ Sbjct: 483 SGKMIFLIELLRRLRDEGHQTLVFSQSRQILNIIERLLKNRHFKILRVDGTVTHLVEREK 542 Query: 104 -----WNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQ 158 + G GL L +V F W+ Q ++R+ + Sbjct: 543 RIHLFQQNKDYSVFLLTTQVGGVGLTLT-AATRVVIFDPSWNPATDAQAVDRV-----YR 596 Query: 159 AGFKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 G K + VY LI T++E + +R K ++ Sbjct: 597 IGQKENIVVYRLITCGTVEEKIYRRQVFKDSL 628 >gi|73997426|ref|XP_867844.1| PREDICTED: similar to chromodomain helicase DNA binding protein 4 isoform 15 [Canis familiaris] Length = 1963 Score = 85.8 bits (211), Expect = 4e-15, Method: Composition-based stats. Identities = 19/136 (13%), Positives = 46/136 (33%), Gaps = 18/136 (13%) Query: 67 NAAPIIVAYHFNSDLARLQ----------KAFPQGRTLDKDPCTIQEWNEG--KIPLLFA 114 +++ L L+ + G T + I +N + Sbjct: 1058 GGHRVLIFSQMTKMLDLLEDFLEHEGYKYERIDGGITGNMRQEAIDRFNAPGAQQFCFLL 1117 Query: 115 HPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQN 174 + G G+NL + ++ + W+ Q +R + G + V +Y + + Sbjct: 1118 STRAGGLGINL-ATADTVIIYDSDWNPHNDIQA-----FSRAHRIGQNKKVMIYRFVTRA 1171 Query: 175 TIDELVLQRLRTKSTI 190 +++E + Q + K + Sbjct: 1172 SVEERITQVAKKKMML 1187 >gi|7022541|dbj|BAA91637.1| unnamed protein product [Homo sapiens] Length = 831 Score = 85.8 bits (211), Expect = 4e-15, Method: Composition-based stats. Identities = 34/216 (15%), Positives = 79/216 (36%), Gaps = 33/216 (15%) Query: 1 MKQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYD-------EEKHWKEVHD 53 MK F+ E + ++ N S+ KC + +D E Sbjct: 295 MKDLDAFENET-----AKKVKLQNILSQLRKC---VDHPYLFDGVEPEPFEVGDHLTEAS 346 Query: 54 EKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAFP---------QGRTLDKDPC-TI 101 K+ L+ ++ + +++ L LQ G ++ I Sbjct: 347 GKLHLLDKLLAFLYSGGHRVLLFSQMTQMLDILQDYMDYRGYSYERVDGSVRGEERHLAI 406 Query: 102 QEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGF 161 + + + I + + G G+NL + ++F ++ + Q R + G Sbjct: 407 KNFGQQPIFVFLLSTRAGGVGMNLT-AADTVIFVDSDFNPQNDLQAAAR-----AHRIGQ 460 Query: 162 KRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 ++V V LI ++T++E+V ++ +K + ++++ Sbjct: 461 NKSVKVIRLIGRDTVEEIVYRKAASKLQLTNMIIEG 496 >gi|312069902|ref|XP_003137898.1| SNF2 family domain-containing protein [Loa loa] gi|307766934|gb|EFO26168.1| SNF2 family domain-containing protein [Loa loa] Length = 840 Score = 85.8 bits (211), Expect = 4e-15, Method: Composition-based stats. Identities = 24/93 (25%), Positives = 45/93 (48%), Gaps = 6/93 (6%) Query: 105 NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA 164 N + A G GLNL G +I++F W+ + Q ++R + G + A Sbjct: 637 NIPECKTTLVFTAIGGEGLNL-IGADIVIFLEHDWNPVKDLQAMDR-----AHRIGQRCA 690 Query: 165 VFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 V VY LI + +I++ +++ + K+ + L+ A Sbjct: 691 VNVYRLITEGSIEQKIMRLQKFKTNTANALVGA 723 >gi|218680317|ref|ZP_03528214.1| non-specific serine/threonine protein kinase [Rhizobium etli CIAT 894] Length = 297 Score = 85.8 bits (211), Expect = 4e-15, Method: Composition-based stats. Identities = 30/141 (21%), Positives = 54/141 (38%), Gaps = 18/141 (12%) Query: 68 AAPIIVAYHFNSDLARLQKAFP----------QGRTLDKDPCTIQEW-NEGKIPLLFAHP 116 A +V + + + G +K P ++ + N+ + Sbjct: 13 EAKAVVFSQWTRTHEIVIRRLKARGIGYVSLHGGVPSEKRPELVERFRNDPDCRVFL-ST 71 Query: 117 ASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTI 176 + GLNLQ + LV L W+ +Q I RI + G R V V +++ TI Sbjct: 72 EAGSAGLNLQN-ASTLVNMDLPWNPAILEQRIARI-----HRIGQARPVQVINFVSKGTI 125 Query: 177 DELVLQRLRTKSTIQDLLLNA 197 +E +L L K ++ +L+ Sbjct: 126 EEGMLSVLAFKRSLSAGILDG 146 >gi|237841199|ref|XP_002369897.1| SNF2 family N-terminal domain-containing protein [Toxoplasma gondii ME49] gi|211967561|gb|EEB02757.1| SNF2 family N-terminal domain-containing protein [Toxoplasma gondii ME49] Length = 1606 Score = 85.8 bits (211), Expect = 4e-15, Method: Composition-based stats. Identities = 31/186 (16%), Positives = 74/186 (39%), Gaps = 23/186 (12%) Query: 29 TVKCLQLANGAVYYDEEKHWKEVHDE---KIKALEVIIEKA--NAAPIIVAYHFNSDLAR 83 ++ ++AN + +E E K + L+ ++ K +++ L Sbjct: 980 LMQLRKIANHPYLFVDEYLVNEDLVRVAGKFECLDRMLPKLLHFKHKVLIFSQMTQVLDL 1039 Query: 84 LQKAF-----PQGRT-----LDKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNI 131 + + R L + ++E+N ++ + + G GLNLQ + Sbjct: 1040 MAEYMHLRGYKYARLDGSVGLTERKERMEEFNNAEVDTMIFMLSTRAGGLGLNLQ-AADT 1098 Query: 132 LVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQ 191 +V F ++ + Q + R + G + V V+ L+ + ++E++L++ K I Sbjct: 1099 VVLFDSDFNPHQDLQAM-----CRAHRLGQTKQVKVFRLVTISGVEEIILEKANRKLNID 1153 Query: 192 DLLLNA 197 +++ A Sbjct: 1154 QMVIQA 1159 >gi|169624246|ref|XP_001805529.1| hypothetical protein SNOG_15379 [Phaeosphaeria nodorum SN15] gi|111056192|gb|EAT77312.1| hypothetical protein SNOG_15379 [Phaeosphaeria nodorum SN15] Length = 1058 Score = 85.8 bits (211), Expect = 4e-15, Method: Composition-based stats. Identities = 27/155 (17%), Positives = 53/155 (34%), Gaps = 21/155 (13%) Query: 51 VHDEKIKALE-VIIEKANAA---PIIVAYHFNSDLA----RLQKAFPQGRTLDK------ 96 KI+ L + + + IV F S L RL++A LD Sbjct: 883 TSSTKIEMLVYDLYKLRSKKQTLKSIVFSQFTSMLQLIEWRLRRAGFNTVMLDGSMTPAM 942 Query: 97 DPCTIQEW-NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTR 155 +I + + + + G LNL + + WW+ Q +R Sbjct: 943 RQKSIDHFMTNPDVEVFLVSLKAGGVALNLTEASRVFI-VDPWWNPAAEWQSADRC---- 997 Query: 156 QRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 + G KR + L +++++ ++ K+ + Sbjct: 998 -HRIGQKRPCVITRLCIEDSVESRMVALQEKKAAM 1031 >gi|56800176|emb|CAI35991.1| chromodomain helicase DNA binding protein 3 [Mus musculus] gi|56800269|emb|CAI35246.1| chromodomain helicase DNA binding protein 3 [Mus musculus] Length = 2055 Score = 85.4 bits (210), Expect = 4e-15, Method: Composition-based stats. Identities = 24/160 (15%), Positives = 52/160 (32%), Gaps = 20/160 (12%) Query: 45 EKHWKEVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQ----------KAFPQGR 92 E K+ L+ ++ K +++ L L+ + G Sbjct: 1103 EGGALIKSSGKLLLLQKMLRKLKEQGHRVLIFSQMTKMLDLLEDFLDYEGYKYERIDGGI 1162 Query: 93 TLDKDPCTIQEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 T I +N + + G G+NL + ++ F W+ Q Sbjct: 1163 TGALRQEAIDRFNAPGAQQFCFLLSTRAGGLGINL-ATADTVIIFDSDWNPHNDIQA--- 1218 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 +R + G V +Y + + +++E + Q + K + Sbjct: 1219 --FSRAHRIGQANKVMIYRFVTRASVEERITQVAKRKMML 1256 >gi|73946611|ref|XP_859774.1| PREDICTED: similar to SWI/SNF-related matrix-associated actin-dependent regulator of chromatin a2 isoform b isoform 4 [Canis familiaris] Length = 1556 Score = 85.4 bits (210), Expect = 4e-15, Method: Composition-based stats. Identities = 31/160 (19%), Positives = 63/160 (39%), Gaps = 20/160 (12%) Query: 52 HDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAF---------PQGRTLDKDPCT 100 K + L+ I+ +A +++ S + ++ F G T +D Sbjct: 1032 ASGKFELLDRILPKLRATNHRVLLFCQMTSLMTIMEDYFAFRNFLYLRLDGTTKSEDRAA 1091 Query: 101 I-QEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 + +++NE + + + G GLNLQ + +V F W+ + Q R Sbjct: 1092 LLKKFNEPGSQYFIFLLSTRAGGLGLNLQ-AADTVVIFDSDWNPHQDLQA-----QDRAH 1145 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + G + V V L N+++E +L + K + ++ A Sbjct: 1146 RIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQA 1185 >gi|322799754|gb|EFZ20959.1| hypothetical protein SINV_16592 [Solenopsis invicta] Length = 529 Score = 85.4 bits (210), Expect = 4e-15, Method: Composition-based stats. Identities = 20/141 (14%), Positives = 49/141 (34%), Gaps = 21/141 (14%) Query: 65 KANAAPIIVAYHFNSDLARLQKAFP----QGRTLD------KDPCTIQEWNEG-----KI 109 + + +++ L L+ + +D + I +N + Sbjct: 329 RDDGHRVLIFSQMTKMLDILEDYLEGEGYKYERIDGNITGAQRQEAIDRFNAPGKYCAQQ 388 Query: 110 PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYY 169 + + G G+NL + ++ + W+ Q +R + G V +Y Sbjct: 389 FVFLLSTRAGGLGINL-ATADTVIIYDSDWNPHNDIQA-----FSRAHRIGQANKVMIYR 442 Query: 170 LIAQNTIDELVLQRLRTKSTI 190 + +N+++E V Q + K + Sbjct: 443 FVTRNSVEERVTQVAKRKMML 463 >gi|213402947|ref|XP_002172246.1| ATP-dependent DNA helicase Rdh54 [Schizosaccharomyces japonicus yFS275] gi|212000293|gb|EEB05953.1| ATP-dependent DNA helicase Rdh54 [Schizosaccharomyces japonicus yFS275] Length = 749 Score = 85.4 bits (210), Expect = 4e-15, Method: Composition-based stats. Identities = 36/212 (16%), Positives = 77/212 (36%), Gaps = 28/212 (13%) Query: 5 HKFQRELYCD----LQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 KF ++ + + N + + +Q D + K + L+ Sbjct: 404 DKFWKDRTLENEKTFPLSTLTELNCLCNSTRLIQ---HQENTDLSLNDLIASSSKFEFLK 460 Query: 61 VIIEKANAAPI--IVAYHFNSDLARLQ---------KAFPQGRT-LDKDPCTIQEWNEGK 108 ++ + + + ++ F L ++ G T + + ++N Sbjct: 461 SLLLEFKNSQLKCVIVSQFTETLNLIEILLKHLLITHCRLDGSTPTNTRQSLVDQFNCST 520 Query: 109 ---IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 + + S G GLNL G N L+ F W+ Q + RI + G R+V Sbjct: 521 YEHLSVFLLSNKSGGAGLNL-VGANRLILFEPSWNPAYDLQALGRI-----YRYGQNRSV 574 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 +Y L++ +DE + R TK+ + + +++ Sbjct: 575 LIYTLLSTGMLDEQIYIRQHTKTGLSNAFMDS 606 >gi|42569923|ref|NP_182025.2| transcription regulatory protein SNF2, putative [Arabidopsis thaliana] gi|330255398|gb|AEC10492.1| SNF2 and helicase domain-containing protein [Arabidopsis thaliana] Length = 851 Score = 85.4 bits (210), Expect = 4e-15, Method: Composition-based stats. Identities = 38/222 (17%), Positives = 82/222 (36%), Gaps = 38/222 (17%) Query: 2 KQYHK-FQREL--YCDLQGENIEAFNSASKTVKCLQL--ANGAVY---------YDEEKH 47 K Y ++EL +L N S +QL A Y ++E +H Sbjct: 306 KIYTSILRKELPGLLELSSG---GSNHTSLQNIVIQLRKACSHPYLFPGIEPEPFEEGEH 362 Query: 48 WKEVHDEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQKAFPQGR----TLDKDPCTI 101 + K+ L+ ++++ + +++ S L LQ R LD Sbjct: 363 LVQ-ASGKLLVLDQLLKRLHDSGHRVLLFSQMTSTLDILQDFMELRRYSYERLDGSVRAE 421 Query: 102 QEWNE--------GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGV 153 + + + + G GLNL + ++F+ W+ + +Q ++R Sbjct: 422 ERFAAIKNFSVDGSNAFVFMISTRAGGVGLNL-VAADTVIFYEQDWNPQVDKQALQR--- 477 Query: 154 TRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 + G V L+ +++++E++L+R K + ++ Sbjct: 478 --AHRIGQISHVLSINLVTEHSVEEVILRRAERKLQLSHNVV 517 >gi|325095596|gb|EGC48906.1| transcription factor [Ajellomyces capsulatus H88] Length = 929 Score = 85.4 bits (210), Expect = 4e-15, Method: Composition-based stats. Identities = 35/155 (22%), Positives = 62/155 (40%), Gaps = 20/155 (12%) Query: 50 EVHDEKIKALEVIIEKANAAP---IIVAYHFNSDLARLQKAFP-----------QGRTLD 95 E KI+AL I+ AP +V + S L ++ + + Sbjct: 753 ETTSSKIQALLKILTAKGQAPNTKTVVFSQWVSFLDIVEPQLVRNGITFARIDGKMSSAK 812 Query: 96 KDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTR 155 +D N+ +L A C GLNL N ++ WW Q ++R+ Sbjct: 813 RDAAMNALSNDSNCTVLLASLNVCSVGLNL-VAANQVILADSWWAPAIEDQAVDRV---- 867 Query: 156 QRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 + G KR ++ L+ +N+I++ VL + + K T+ Sbjct: 868 -YRLGQKRPTTIWRLVMENSIEDRVLDKQKEKRTL 901 >gi|302795003|ref|XP_002979265.1| hypothetical protein SELMODRAFT_110395 [Selaginella moellendorffii] gi|300153033|gb|EFJ19673.1| hypothetical protein SELMODRAFT_110395 [Selaginella moellendorffii] Length = 684 Score = 85.4 bits (210), Expect = 4e-15, Method: Composition-based stats. Identities = 24/143 (16%), Positives = 54/143 (37%), Gaps = 19/143 (13%) Query: 65 KANAAPIIVAYHFNSDLARLQKAFPQ-----------GRTLDKDPCTIQEWNEGKIPLLF 113 K+ +++ L L+ + + D+ I EG + Sbjct: 463 KSRGHRVLIFSQMTKMLDILEFCLGERGMPPFRLDGNVKQEDRQEQVITFSREG--FVFL 520 Query: 114 AHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQ 173 + G G+NL + + + W+ + Q ++R + G R V VY L Sbjct: 521 LSTRAGGLGINLT-SADTAIIYDSDWNPQMDLQAMDRC-----HRIGQTRPVHVYRLATA 574 Query: 174 NTIDELVLQRLRTKSTIQDLLLN 196 ++++ +L+ +K ++ L++N Sbjct: 575 HSVECRMLKVANSKLQLETLVIN 597 >gi|73946645|ref|XP_860367.1| PREDICTED: similar to SWI/SNF-related matrix-associated actin-dependent regulator of chromatin a2 isoform b isoform 21 [Canis familiaris] Length = 1553 Score = 85.4 bits (210), Expect = 4e-15, Method: Composition-based stats. Identities = 37/226 (16%), Positives = 78/226 (34%), Gaps = 37/226 (16%) Query: 3 QYHKFQRELYCDLQGENIEA-FNSASKTVKCLQLANGAVYYDEEKHWKEV---------- 51 Y Q + G + + + +QL + +H + + Sbjct: 963 LYRHMQAKGILLTDGSEKDKKVRAKTLMNTIMQLRKICNHPYMFQHIETLICKKNFNIKT 1022 Query: 52 ------HDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAF---------PQGRTL 94 K + L+ I+ +A +++ S + ++ F G T Sbjct: 1023 FRSLYRASGKFELLDRILPKLRATNHRVLLFCQMTSLMTIMEDYFAFRNFLYLRLDGTTK 1082 Query: 95 DKDPCTI-QEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERI 151 +D + +++NE + + + G GLNLQ + +V F W+ + Q Sbjct: 1083 SEDRAALLKKFNEPGSQYFIFLLSTRAGGLGLNLQ-AADTVVIFDSDWNPHQDLQA---- 1137 Query: 152 GVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 R + G + V V L N+++E +L + K + ++ A Sbjct: 1138 -QDRAHRIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQA 1182 >gi|67467805|ref|XP_649984.1| chromodomain-helicase-DNA-binding protein [Entamoeba histolytica HM-1:IMSS] gi|56466523|gb|EAL44598.1| chromodomain-helicase-DNA-binding protein, putative [Entamoeba histolytica HM-1:IMSS] Length = 1247 Score = 85.4 bits (210), Expect = 4e-15, Method: Composition-based stats. Identities = 28/158 (17%), Positives = 60/158 (37%), Gaps = 20/158 (12%) Query: 52 HDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFP---------QGRTLDKDPC- 99 K+ L+ ++ K A+ +++ L ++K G +D Sbjct: 617 SSGKLVLLDKLLPKLYADHHKVLIFSQLKKVLNIIEKYLKYKGYFYERLDGSIKSEDRQN 676 Query: 100 TIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 I + ++ + + G G+NL + ++ F W+ + Q R Sbjct: 677 AIDRFMNPEMNRFIFLLCTRAGGFGINLSE-ADTVIIFDSDWNPQNDLQAQARC-----H 730 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 + G K+ V VY L+++NT + + +R K + +L Sbjct: 731 RIGQKKEVKVYRLVSKNTYERYMFERASMKLGLDQAVL 768 >gi|291405109|ref|XP_002719030.1| PREDICTED: chromodomain helicase DNA binding protein 3-like [Oryctolagus cuniculus] Length = 1910 Score = 85.4 bits (210), Expect = 4e-15, Method: Composition-based stats. Identities = 24/160 (15%), Positives = 52/160 (32%), Gaps = 20/160 (12%) Query: 45 EKHWKEVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQ----------KAFPQGR 92 E K+ L+ ++ K +++ L L+ + G Sbjct: 1046 EGGALIKSSGKLMLLQKMLRKLKEQGHRVLIFSQMTKMLDLLEDFLDYEGYKYERIDGGI 1105 Query: 93 TLDKDPCTIQEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 T I +N + + G G+NL + ++ F W+ Q Sbjct: 1106 TGALRQEAIDRFNAPGAQQFCFLLSTRAGGLGINL-ATADTVIIFDSDWNPHNDIQA--- 1161 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 +R + G V +Y + + +++E + Q + K + Sbjct: 1162 --FSRAHRIGQANKVMIYRFVTRASVEERITQVAKRKMML 1199 >gi|281349310|gb|EFB24894.1| hypothetical protein PANDA_007733 [Ailuropoda melanoleuca] Length = 1561 Score = 85.4 bits (210), Expect = 4e-15, Method: Composition-based stats. Identities = 31/160 (19%), Positives = 63/160 (39%), Gaps = 20/160 (12%) Query: 52 HDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAF---------PQGRTLDKDPCT 100 K + L+ I+ +A +++ S + ++ F G T +D Sbjct: 1023 ASGKFELLDRILPKLRATNHRVLLFCQMTSLMTIMEDYFAFRNFLYLRLDGTTKSEDRAA 1082 Query: 101 I-QEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 + +++NE + + + G GLNLQ + +V F W+ + Q R Sbjct: 1083 LLKKFNEPGSQYFIFLLSTRAGGLGLNLQ-AADTVVIFDSDWNPHQDLQA-----QDRAH 1136 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + G + V V L N+++E +L + K + ++ A Sbjct: 1137 RIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQA 1176 >gi|281337385|gb|EFB12969.1| hypothetical protein PANDA_010298 [Ailuropoda melanoleuca] Length = 1583 Score = 85.4 bits (210), Expect = 4e-15, Method: Composition-based stats. Identities = 30/160 (18%), Positives = 62/160 (38%), Gaps = 20/160 (12%) Query: 52 HDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAF---------PQGRTLDKDPCT 100 K + L+ I+ +A +++ S + ++ F G T +D Sbjct: 1078 ASGKFELLDRILPKLRATNHKVLLFCQMTSLMTIMEDYFAYRGFKYLRLDGTTKAEDRGM 1137 Query: 101 I-QEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 + + +NE + + + G GLNLQ + ++ F W+ + Q R Sbjct: 1138 LLKTFNEPGSEYFIFLLSTRAGGLGLNLQ-SADTVIIFDSDWNPHQDLQA-----QDRAH 1191 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + G + V V L N+++E +L + K + ++ A Sbjct: 1192 RIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQA 1231 >gi|226706292|sp|B0R0I6|CHD8_DANRE RecName: Full=Chromodomain-helicase-DNA-binding protein 8; Short=CHD-8; AltName: Full=ATP-dependent helicase CHD8 Length = 2511 Score = 85.4 bits (210), Expect = 4e-15, Method: Composition-based stats. Identities = 28/158 (17%), Positives = 58/158 (36%), Gaps = 20/158 (12%) Query: 55 KIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTL----------DKDPCTIQ 102 K+ L+ ++ + A +++ L L+ R L + I Sbjct: 1171 KLVLLDKLLPRLKAGGHKVLIFSQMVRCLDILEDYLIHKRYLYERIDGRVRGNLRQAAID 1230 Query: 103 EWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 +++ + + G G+NL + V F W+ + Q R + G Sbjct: 1231 RFSKPDSDRFVFLLCTRAGGLGINLT-AADTCVIFDSDWNPQNDLQAQARC-----HRIG 1284 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNAL 198 +AV VY LI +N+ + +L + K + +L ++ Sbjct: 1285 QSKAVKVYRLITRNSYEREMLDKASLKLGLDRAVLQSM 1322 >gi|158420731|ref|NP_001005271.2| chromodomain-helicase-DNA-binding protein 3 isoform 3 [Homo sapiens] Length = 2059 Score = 85.4 bits (210), Expect = 4e-15, Method: Composition-based stats. Identities = 24/160 (15%), Positives = 52/160 (32%), Gaps = 20/160 (12%) Query: 45 EKHWKEVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQ----------KAFPQGR 92 E K+ L+ ++ K +++ L L+ + G Sbjct: 1110 EGGALIKSSGKLMLLQKMLRKLKEQGHRVLIFSQMTKMLDLLEDFLDYEGYKYERIDGGI 1169 Query: 93 TLDKDPCTIQEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 T I +N + + G G+NL + ++ F W+ Q Sbjct: 1170 TGALRQEAIDRFNAPGAQQFCFLLSTRAGGLGINL-ATADTVIIFDSDWNPHNDIQA--- 1225 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 +R + G V +Y + + +++E + Q + K + Sbjct: 1226 --FSRAHRIGQANKVMIYRFVTRASVEERITQVAKRKMML 1263 >gi|149611552|ref|XP_001521337.1| PREDICTED: similar to SMARCA4, partial [Ornithorhynchus anatinus] Length = 708 Score = 85.4 bits (210), Expect = 4e-15, Method: Composition-based stats. Identities = 30/160 (18%), Positives = 62/160 (38%), Gaps = 20/160 (12%) Query: 52 HDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAF---------PQGRTLDKDPCT 100 K + L+ I+ +A +++ S + ++ F G T +D Sbjct: 313 ASGKFELLDRILPKLRATNHKVLLFCQMTSLMTIMEDYFAYRGFKYLRLDGTTKAEDRGM 372 Query: 101 I-QEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 + + +NE + + + G GLNLQ + ++ F W+ + Q R Sbjct: 373 LLKTFNEPGSEYFIFLLSTRAGGLGLNLQ-SADTVIIFDSDWNPHQDLQA-----QDRAH 426 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + G + V V L N+++E +L + K + ++ A Sbjct: 427 RIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQA 466 >gi|126309162|ref|XP_001369227.1| PREDICTED: similar to chromodomain helicase DNA binding protein 3 [Monodelphis domestica] Length = 2131 Score = 85.4 bits (210), Expect = 4e-15, Method: Composition-based stats. Identities = 24/160 (15%), Positives = 52/160 (32%), Gaps = 20/160 (12%) Query: 45 EKHWKEVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQ----------KAFPQGR 92 E K+ L+ ++ K +++ L L+ + G Sbjct: 1219 EGGALIKSSGKLMLLQKMLRKLKEQGHRVLIFSQMTKMLDLLEDFLDYEGYKYERIDGGI 1278 Query: 93 TLDKDPCTIQEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 T I +N + + G G+NL + ++ F W+ Q Sbjct: 1279 TGALRQEAIDRFNAPGAQQFCFLLSTRAGGLGINL-ATADTVIIFDSDWNPHNDIQA--- 1334 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 +R + G V +Y + + +++E + Q + K + Sbjct: 1335 --FSRAHRIGQANKVMIYRFVTRASVEERITQVAKRKMML 1372 >gi|162318864|gb|AAI56473.1| Chromodomain helicase DNA binding protein 3 [synthetic construct] Length = 2045 Score = 85.4 bits (210), Expect = 4e-15, Method: Composition-based stats. Identities = 24/160 (15%), Positives = 52/160 (32%), Gaps = 20/160 (12%) Query: 45 EKHWKEVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQ----------KAFPQGR 92 E K+ L+ ++ K +++ L L+ + G Sbjct: 1096 EGGALIKSSGKLMLLQKMLRKLKEQGHRVLIFSQMTKMLDLLEDFLDYEGYKYERIDGGI 1155 Query: 93 TLDKDPCTIQEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 T I +N + + G G+NL + ++ F W+ Q Sbjct: 1156 TGALRQEAIDRFNAPGAQQFCFLLSTRAGGLGINL-ATADTVIIFDSDWNPHNDIQA--- 1211 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 +R + G V +Y + + +++E + Q + K + Sbjct: 1212 --FSRAHRIGQANKVMIYRFVTRASVEERITQVAKRKMML 1249 >gi|52630322|ref|NP_005843.2| chromodomain-helicase-DNA-binding protein 3 isoform 2 [Homo sapiens] gi|119610520|gb|EAW90114.1| chromodomain helicase DNA binding protein 3, isoform CRA_a [Homo sapiens] gi|119610522|gb|EAW90116.1| chromodomain helicase DNA binding protein 3, isoform CRA_a [Homo sapiens] Length = 1966 Score = 85.4 bits (210), Expect = 4e-15, Method: Composition-based stats. Identities = 24/160 (15%), Positives = 52/160 (32%), Gaps = 20/160 (12%) Query: 45 EKHWKEVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQ----------KAFPQGR 92 E K+ L+ ++ K +++ L L+ + G Sbjct: 1051 EGGALIKSSGKLMLLQKMLRKLKEQGHRVLIFSQMTKMLDLLEDFLDYEGYKYERIDGGI 1110 Query: 93 TLDKDPCTIQEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 T I +N + + G G+NL + ++ F W+ Q Sbjct: 1111 TGALRQEAIDRFNAPGAQQFCFLLSTRAGGLGINL-ATADTVIIFDSDWNPHNDIQA--- 1166 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 +R + G V +Y + + +++E + Q + K + Sbjct: 1167 --FSRAHRIGQANKVMIYRFVTRASVEERITQVAKRKMML 1204 >gi|2645433|gb|AAB87383.1| CHD3 [Homo sapiens] Length = 1944 Score = 85.4 bits (210), Expect = 4e-15, Method: Composition-based stats. Identities = 24/160 (15%), Positives = 52/160 (32%), Gaps = 20/160 (12%) Query: 45 EKHWKEVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQ----------KAFPQGR 92 E K+ L+ ++ K +++ L L+ + G Sbjct: 1051 EGGALIKSSGKLMLLQKMLRKLKEQGHRVLIFSQMTKMLDLLEDFLDYEGYKYERIDGGI 1110 Query: 93 TLDKDPCTIQEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 T I +N + + G G+NL + ++ F W+ Q Sbjct: 1111 TGALRQEAIDRFNAPGAQQFCFLLSTRAGGLGINL-ATADTVIIFDSDWNPHNDIQA--- 1166 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 +R + G V +Y + + +++E + Q + K + Sbjct: 1167 --FSRAHRIGQANKVMIYRFVTRASVEERITQVAKRKMML 1204 >gi|3298562|gb|AAC39923.1| zinc-finger helicase [Homo sapiens] Length = 2000 Score = 85.4 bits (210), Expect = 4e-15, Method: Composition-based stats. Identities = 24/160 (15%), Positives = 52/160 (32%), Gaps = 20/160 (12%) Query: 45 EKHWKEVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQ----------KAFPQGR 92 E K+ L+ ++ K +++ L L+ + G Sbjct: 1051 EGGALIKSSGKLMLLQKMLRKLKEQGHRVLIFSQMTKMLDLLEDFLDYEGYKYERIDGGI 1110 Query: 93 TLDKDPCTIQEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 T I +N + + G G+NL + ++ F W+ Q Sbjct: 1111 TGALRQEAIDRFNAPGAQQFCFLLSTRAGGLGINL-ATADTVIIFDSDWNPHNDIQA--- 1166 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 +R + G V +Y + + +++E + Q + K + Sbjct: 1167 --FSRAHRIGQANKVMIYRFVTRASVEERITQVAKRKMML 1204 >gi|73946621|ref|XP_859943.1| PREDICTED: similar to SWI/SNF-related matrix-associated actin-dependent regulator of chromatin a2 isoform b isoform 9 [Canis familiaris] Length = 1532 Score = 85.4 bits (210), Expect = 4e-15, Method: Composition-based stats. Identities = 31/160 (19%), Positives = 63/160 (39%), Gaps = 20/160 (12%) Query: 52 HDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAF---------PQGRTLDKDPCT 100 K + L+ I+ +A +++ S + ++ F G T +D Sbjct: 1008 ASGKFELLDRILPKLRATNHRVLLFCQMTSLMTIMEDYFAFRNFLYLRLDGTTKSEDRAA 1067 Query: 101 I-QEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 + +++NE + + + G GLNLQ + +V F W+ + Q R Sbjct: 1068 LLKKFNEPGSQYFIFLLSTRAGGLGLNLQ-AADTVVIFDSDWNPHQDLQA-----QDRAH 1121 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + G + V V L N+++E +L + K + ++ A Sbjct: 1122 RIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQA 1161 >gi|52630326|ref|NP_001005273.1| chromodomain-helicase-DNA-binding protein 3 isoform 1 [Homo sapiens] gi|88911273|sp|Q12873|CHD3_HUMAN RecName: Full=Chromodomain-helicase-DNA-binding protein 3; Short=CHD-3; AltName: Full=ATP-dependent helicase CHD3; AltName: Full=Mi-2 autoantigen 240 kDa protein; AltName: Full=Mi2-alpha; AltName: Full=Zinc finger helicase; Short=hZFH gi|119610521|gb|EAW90115.1| chromodomain helicase DNA binding protein 3, isoform CRA_b [Homo sapiens] Length = 2000 Score = 85.4 bits (210), Expect = 4e-15, Method: Composition-based stats. Identities = 24/160 (15%), Positives = 52/160 (32%), Gaps = 20/160 (12%) Query: 45 EKHWKEVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQ----------KAFPQGR 92 E K+ L+ ++ K +++ L L+ + G Sbjct: 1051 EGGALIKSSGKLMLLQKMLRKLKEQGHRVLIFSQMTKMLDLLEDFLDYEGYKYERIDGGI 1110 Query: 93 TLDKDPCTIQEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 T I +N + + G G+NL + ++ F W+ Q Sbjct: 1111 TGALRQEAIDRFNAPGAQQFCFLLSTRAGGLGINL-ATADTVIIFDSDWNPHNDIQA--- 1166 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 +R + G V +Y + + +++E + Q + K + Sbjct: 1167 --FSRAHRIGQANKVMIYRFVTRASVEERITQVAKRKMML 1204 >gi|324499809|gb|ADY39928.1| Chromodomain-helicase-DNA-binding protein 3 [Ascaris suum] Length = 1844 Score = 85.4 bits (210), Expect = 4e-15, Method: Composition-based stats. Identities = 24/167 (14%), Positives = 55/167 (32%), Gaps = 20/167 (11%) Query: 45 EKHWKEVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARL---------QKAFPQGRT 93 E K L+ ++ K +++ L L + G Sbjct: 937 EGTALIKASGKFILLQKMLRKLKEQGHRVLIFSQMTKMLDVLEDFCENEGYKYERIDGSI 996 Query: 94 LDKDPCT-IQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 + I +N + + G G+NL + ++ + W+ Q Sbjct: 997 TGQARQDAIDRFNAPNAQQFVFLLSTRAGGLGINL-ATADTVIIYDSDWNPHNDIQA--- 1052 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 +R + G + V +Y + +N+++E + + K + L++ A Sbjct: 1053 --FSRAHRIGQQNKVLIYRFVTRNSVEERITSVAKKKMLLTHLVVRA 1097 >gi|301614708|ref|XP_002936822.1| PREDICTED: DNA excision repair protein ERCC-6-like [Xenopus (Silurana) tropicalis] Length = 1361 Score = 85.4 bits (210), Expect = 4e-15, Method: Composition-based stats. Identities = 24/136 (17%), Positives = 47/136 (34%), Gaps = 15/136 (11%) Query: 64 EKANAAPIIVAYHFNSD-LARLQK-------AFPQGRTLDKDPCTIQEWNEGKI-PLLFA 114 E+ + + D + R+ + L + I + +L Sbjct: 478 EEGHRTLVFSQSRKMLDMIDRILQNKNFKVMRIDGTVALPEREKRISIFQSNNNYSVLLL 537 Query: 115 HPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQN 174 G GL L + +V F W+ Q ++R + G + V +Y LI Sbjct: 538 TTQVGGVGLTLT-AADRVVIFDPSWNPATDAQAVDR-----AYRIGQQENVVIYRLITCG 591 Query: 175 TIDELVLQRLRTKSTI 190 T++E + +R K ++ Sbjct: 592 TVEEKIYRRQIFKESL 607 >gi|73946625|ref|XP_860020.1| PREDICTED: similar to SWI/SNF-related matrix-associated actin-dependent regulator of chromatin a2 isoform b isoform 11 [Canis familiaris] Length = 1547 Score = 85.4 bits (210), Expect = 4e-15, Method: Composition-based stats. Identities = 38/220 (17%), Positives = 77/220 (35%), Gaps = 31/220 (14%) Query: 3 QYHKFQRELYCDLQGENIEAFNSA---SKTVKCLQL---ANGAVYYDEEKHWKEVH---- 52 Y Q + G + + +QL N + + W+ Sbjct: 963 LYRHMQAKGILLTDGSEKDKKGKGGAKTLMNTIMQLRKICNHPYMFQHIEMWEVSAELYR 1022 Query: 53 -DEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAF---------PQGRTLDKDPCT 100 K + L+ I+ +A +++ S + ++ F G T +D Sbjct: 1023 ASGKFELLDRILPKLRATNHRVLLFCQMTSLMTIMEDYFAFRNFLYLRLDGTTKSEDRAA 1082 Query: 101 I-QEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 + +++NE + + + G GLNLQ + +V F W+ + Q R Sbjct: 1083 LLKKFNEPGSQYFIFLLSTRAGGLGLNLQ-AADTVVIFDSDWNPHQDLQA-----QDRAH 1136 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + G + V V L N+++E +L + K + ++ A Sbjct: 1137 RIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQA 1176 >gi|258574887|ref|XP_002541625.1| conserved hypothetical protein [Uncinocarpus reesii 1704] gi|237901891|gb|EEP76292.1| conserved hypothetical protein [Uncinocarpus reesii 1704] Length = 1041 Score = 85.4 bits (210), Expect = 4e-15, Method: Composition-based stats. Identities = 29/159 (18%), Positives = 57/159 (35%), Gaps = 18/159 (11%) Query: 51 VHDEKIKALEVIIEKANAA-PIIVAYHFNSDLARLQ----------KAFPQGRTLDKDPC 99 V KI+ L I+++ IV F S L +++ + G D Sbjct: 789 VSSTKIRHLLRILKREAGEFKFIVFSVFTSMLDKIEPFLKGAGIGYARYDGGMRNDLREA 848 Query: 100 TIQEW-NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQ 158 ++ N +L + GLNL + +V +W+ +Q I+R+ + Sbjct: 849 SLDRLRNSSSTRVLLCSLRAGSLGLNLT-AASRVVILEPFWNPFVEEQAIDRV-----HR 902 Query: 159 AGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 V VY + ++T++ +L K + + Sbjct: 903 LNQTVDVKVYKMTIRDTVEARILDLQERKRELASATIEG 941 >gi|194224801|ref|XP_001490809.2| PREDICTED: SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2 [Equus caballus] Length = 1548 Score = 85.4 bits (210), Expect = 4e-15, Method: Composition-based stats. Identities = 31/160 (19%), Positives = 63/160 (39%), Gaps = 20/160 (12%) Query: 52 HDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAF---------PQGRTLDKDPCT 100 K + L+ I+ +A +++ S + ++ F G T +D Sbjct: 1006 ASGKFELLDRILPKLRATNHRVLLFCQMTSLMTIMEDYFAFRNFLYLRLDGTTKSEDRAA 1065 Query: 101 I-QEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 + +++NE + + + G GLNLQ + +V F W+ + Q R Sbjct: 1066 LLKKFNEPGSQYFIFLLSTRAGGLGLNLQ-AADTVVIFDSDWNPHQDLQA-----QDRAH 1119 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + G + V V L N+++E +L + K + ++ A Sbjct: 1120 RIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQA 1159 >gi|73946647|ref|XP_860406.1| PREDICTED: similar to SWI/SNF-related matrix-associated actin-dependent regulator of chromatin a2 isoform b isoform 22 [Canis familiaris] Length = 1552 Score = 85.4 bits (210), Expect = 4e-15, Method: Composition-based stats. Identities = 31/160 (19%), Positives = 63/160 (39%), Gaps = 20/160 (12%) Query: 52 HDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAF---------PQGRTLDKDPCT 100 K + L+ I+ +A +++ S + ++ F G T +D Sbjct: 1028 ASGKFELLDRILPKLRATNHRVLLFCQMTSLMTIMEDYFAFRNFLYLRLDGTTKSEDRAA 1087 Query: 101 I-QEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 + +++NE + + + G GLNLQ + +V F W+ + Q R Sbjct: 1088 LLKKFNEPGSQYFIFLLSTRAGGLGLNLQ-AADTVVIFDSDWNPHQDLQA-----QDRAH 1141 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + G + V V L N+++E +L + K + ++ A Sbjct: 1142 RIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQA 1181 >gi|157821521|ref|NP_001101267.1| chromodomain-helicase-DNA-binding protein 6 [Rattus norvegicus] gi|149043033|gb|EDL96607.1| chromodomain helicase DNA binding protein 6 (predicted) [Rattus norvegicus] Length = 2698 Score = 85.4 bits (210), Expect = 4e-15, Method: Composition-based stats. Identities = 25/149 (16%), Positives = 52/149 (34%), Gaps = 18/149 (12%) Query: 66 ANAAPIIVAYHFNSDLARLQKAFPQGR-TLDK---------DPCTIQEWNEGKIP--LLF 113 A +++ L L+ Q R T ++ I + + + Sbjct: 796 AGGHKVLIFSQMVRCLDILEDYLIQRRYTYERIDGRVRGNLRQAAIDRFCKPDSDRFVFL 855 Query: 114 AHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQ 173 + G G+NL + + F W+ + Q R + G +AV VY LI + Sbjct: 856 LCTRAGGLGINLT-AADTCIIFDSDWNPQNDLQAQARC-----HRIGQSKAVKVYRLITR 909 Query: 174 NTIDELVLQRLRTKSTIQDLLLNALKKET 202 N+ + + + K + +L + ++ Sbjct: 910 NSYEREMFDKASLKLGLDKAILQDINRKG 938 >gi|73946631|ref|XP_860127.1| PREDICTED: similar to SWI/SNF-related matrix-associated actin-dependent regulator of chromatin a2 isoform b isoform 14 [Canis familiaris] Length = 1554 Score = 85.4 bits (210), Expect = 4e-15, Method: Composition-based stats. Identities = 31/160 (19%), Positives = 63/160 (39%), Gaps = 20/160 (12%) Query: 52 HDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAF---------PQGRTLDKDPCT 100 K + L+ I+ +A +++ S + ++ F G T +D Sbjct: 1030 ASGKFELLDRILPKLRATNHRVLLFCQMTSLMTIMEDYFAFRNFLYLRLDGTTKSEDRAA 1089 Query: 101 I-QEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 + +++NE + + + G GLNLQ + +V F W+ + Q R Sbjct: 1090 LLKKFNEPGSQYFIFLLSTRAGGLGLNLQ-AADTVVIFDSDWNPHQDLQA-----QDRAH 1143 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + G + V V L N+++E +L + K + ++ A Sbjct: 1144 RIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQA 1183 >gi|73946667|ref|XP_860732.1| PREDICTED: similar to SWI/SNF-related matrix-associated actin-dependent regulator of chromatin a2 isoform b isoform 31 [Canis familiaris] Length = 1548 Score = 85.4 bits (210), Expect = 4e-15, Method: Composition-based stats. Identities = 31/160 (19%), Positives = 63/160 (39%), Gaps = 20/160 (12%) Query: 52 HDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAF---------PQGRTLDKDPCT 100 K + L+ I+ +A +++ S + ++ F G T +D Sbjct: 1022 ASGKFELLDRILPKLRATNHRVLLFCQMTSLMTIMEDYFAFRNFLYLRLDGTTKSEDRAA 1081 Query: 101 I-QEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 + +++NE + + + G GLNLQ + +V F W+ + Q R Sbjct: 1082 LLKKFNEPGSQYFIFLLSTRAGGLGLNLQ-AADTVVIFDSDWNPHQDLQA-----QDRAH 1135 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + G + V V L N+++E +L + K + ++ A Sbjct: 1136 RIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQA 1175 >gi|73946661|ref|XP_860636.1| PREDICTED: similar to SWI/SNF-related matrix-associated actin-dependent regulator of chromatin a2 isoform b isoform 28 [Canis familiaris] Length = 1549 Score = 85.4 bits (210), Expect = 4e-15, Method: Composition-based stats. Identities = 31/160 (19%), Positives = 63/160 (39%), Gaps = 20/160 (12%) Query: 52 HDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAF---------PQGRTLDKDPCT 100 K + L+ I+ +A +++ S + ++ F G T +D Sbjct: 1025 ASGKFELLDRILPKLRATNHRVLLFCQMTSLMTIMEDYFAFRNFLYLRLDGTTKSEDRAA 1084 Query: 101 I-QEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 + +++NE + + + G GLNLQ + +V F W+ + Q R Sbjct: 1085 LLKKFNEPGSQYFIFLLSTRAGGLGLNLQ-AADTVVIFDSDWNPHQDLQA-----QDRAH 1138 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + G + V V L N+++E +L + K + ++ A Sbjct: 1139 RIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQA 1178 >gi|73946673|ref|XP_860834.1| PREDICTED: similar to SWI/SNF-related matrix-associated actin-dependent regulator of chromatin a2 isoform b isoform 33 [Canis familiaris] Length = 1536 Score = 85.4 bits (210), Expect = 4e-15, Method: Composition-based stats. Identities = 31/160 (19%), Positives = 63/160 (39%), Gaps = 20/160 (12%) Query: 52 HDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAF---------PQGRTLDKDPCT 100 K + L+ I+ +A +++ S + ++ F G T +D Sbjct: 1012 ASGKFELLDRILPKLRATNHRVLLFCQMTSLMTIMEDYFAFRNFLYLRLDGTTKSEDRAA 1071 Query: 101 I-QEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 + +++NE + + + G GLNLQ + +V F W+ + Q R Sbjct: 1072 LLKKFNEPGSQYFIFLLSTRAGGLGLNLQ-AADTVVIFDSDWNPHQDLQA-----QDRAH 1125 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + G + V V L N+++E +L + K + ++ A Sbjct: 1126 RIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQA 1165 >gi|74149099|dbj|BAE32198.1| unnamed protein product [Mus musculus] Length = 895 Score = 85.4 bits (210), Expect = 4e-15, Method: Composition-based stats. Identities = 19/136 (13%), Positives = 46/136 (33%), Gaps = 18/136 (13%) Query: 67 NAAPIIVAYHFNSDLARLQ----------KAFPQGRTLDKDPCTIQEWNEG--KIPLLFA 114 +++ L L+ + G T + I +N + Sbjct: 672 GGHRVLIFSQMTKMLDLLEDFLEHEGYKYERIDGGITGNMRQEAIDRFNAPGAQQFCFLL 731 Query: 115 HPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQN 174 + G G+NL + ++ + W+ Q +R + G + V +Y + + Sbjct: 732 STRAGGLGINL-ATADTVIIYDSDWNPHNDIQA-----FSRAHRIGQNKKVMIYRFVTRA 785 Query: 175 TIDELVLQRLRTKSTI 190 +++E + Q + K + Sbjct: 786 SVEERITQVAKKKMML 801 >gi|297699953|ref|XP_002827042.1| PREDICTED: LOW QUALITY PROTEIN: chromodomain-helicase-DNA-binding protein 3-like [Pongo abelii] Length = 1945 Score = 85.4 bits (210), Expect = 4e-15, Method: Composition-based stats. Identities = 24/160 (15%), Positives = 52/160 (32%), Gaps = 20/160 (12%) Query: 45 EKHWKEVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQ----------KAFPQGR 92 E K+ L+ ++ K +++ L L+ + G Sbjct: 1000 EGGALIKSSGKLMLLQKMLRKLKEQGHRVLIFSQMTKMLDLLEDFLDYEGYKYERIDGGI 1059 Query: 93 TLDKDPCTIQEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 T I +N + + G G+NL + ++ F W+ Q Sbjct: 1060 TGALRQEAIDRFNAPGAQQFCFLLSTRAGGLGINL-ATADTVIIFDSDWNPHNDIQA--- 1115 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 +R + G V +Y + + +++E + Q + K + Sbjct: 1116 --FSRAHRIGQANKVMIYRFVTRASVEERITQVAKRKMML 1153 >gi|223462579|gb|AAI50807.1| Chromodomain helicase DNA binding protein 6 [Mus musculus] Length = 2711 Score = 85.4 bits (210), Expect = 4e-15, Method: Composition-based stats. Identities = 25/149 (16%), Positives = 52/149 (34%), Gaps = 18/149 (12%) Query: 66 ANAAPIIVAYHFNSDLARLQKAFPQGR-TLDK---------DPCTIQEWNEGKIP--LLF 113 A +++ L L+ Q R T ++ I + + + Sbjct: 796 AGGHKVLIFSQMVRCLDILEDYLIQRRYTYERIDGRVRGNLRQAAIDRFCKPDSDRFVFL 855 Query: 114 AHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQ 173 + G G+NL + + F W+ + Q R + G +AV VY LI + Sbjct: 856 LCTRAGGLGINLT-AADTCIIFDSDWNPQNDLQAQARC-----HRIGQSKAVKVYRLITR 909 Query: 174 NTIDELVLQRLRTKSTIQDLLLNALKKET 202 N+ + + + K + +L + ++ Sbjct: 910 NSYEREMFDKASLKLGLDKAILQDINRKG 938 >gi|195473411|ref|XP_002088987.1| GE10215 [Drosophila yakuba] gi|194175088|gb|EDW88699.1| GE10215 [Drosophila yakuba] Length = 166 Score = 85.4 bits (210), Expect = 4e-15, Method: Composition-based stats. Identities = 22/117 (18%), Positives = 49/117 (41%), Gaps = 7/117 (5%) Query: 87 AFPQGRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQ 145 ++ I ++N + I + + G G+NL ++ + ++ + Sbjct: 19 RLDGSTAVNVRQDLITDFNGDDNIFVFLLSTKAGGVGINLTAADTCVIH-DIDFNPYNDK 77 Query: 146 QMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKET 202 Q +R + G +R V +Y LI+++TI+E +L K ++ + + K E Sbjct: 78 QAEDRC-----HRMGQQRPVTIYRLISESTIEEGILMAAEEKLKLEKDITSNEKGEV 129 >gi|119596385|gb|EAW75979.1| chromodomain helicase DNA binding protein 6, isoform CRA_f [Homo sapiens] Length = 1856 Score = 85.4 bits (210), Expect = 4e-15, Method: Composition-based stats. Identities = 37/235 (15%), Positives = 79/235 (33%), Gaps = 40/235 (17%) Query: 2 KQYHK-FQRE-LYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEK--------HWKEV 51 K Y ++ + N + ++ + N +EEK H + Sbjct: 32 KYYRAILEKNFSFLTKGANQHNMPNLINTMMELRKCCNHPYLINEEKILEDFRKTHSPDA 91 Query: 52 HDEKIKALEV------IIEK------ANAAPIIVAYHFNSDLARLQKAFPQGR-TLDK-- 96 D +++A+ +I+K A +++ L L+ Q R T ++ Sbjct: 92 PDFQLQAMIQAAGKLVLIDKLLPKLIAGGHKVLIFSQMVRCLDILEDYLIQRRYTYERID 151 Query: 97 -------DPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQM 147 I + + + + G G+NL + + F W+ + Q Sbjct: 152 GRVRGNLRQAAIDRFCKPDSDRFVFLLCTRAGGLGINLT-AADTCIIFDSDWNPQNDLQA 210 Query: 148 IERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKET 202 R + G +AV VY LI +N+ + + + K + +L + ++ Sbjct: 211 QARC-----HRIGQSKAVKVYRLITRNSYEREMFDKASLKLGLDKAVLQDINRKG 260 >gi|119596386|gb|EAW75980.1| chromodomain helicase DNA binding protein 6, isoform CRA_g [Homo sapiens] Length = 1875 Score = 85.4 bits (210), Expect = 4e-15, Method: Composition-based stats. Identities = 37/235 (15%), Positives = 79/235 (33%), Gaps = 40/235 (17%) Query: 2 KQYHK-FQRE-LYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEK--------HWKEV 51 K Y ++ + N + ++ + N +EEK H + Sbjct: 32 KYYRAILEKNFSFLTKGANQHNMPNLINTMMELRKCCNHPYLINEEKILEDFRKTHSPDA 91 Query: 52 HDEKIKALEV------IIEK------ANAAPIIVAYHFNSDLARLQKAFPQGR-TLDK-- 96 D +++A+ +I+K A +++ L L+ Q R T ++ Sbjct: 92 PDFQLQAMIQAAGKLVLIDKLLPKLIAGGHKVLIFSQMVRCLDILEDYLIQRRYTYERID 151 Query: 97 -------DPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQM 147 I + + + + G G+NL + + F W+ + Q Sbjct: 152 GRVRGNLRQAAIDRFCKPDSDRFVFLLCTRAGGLGINLT-AADTCIIFDSDWNPQNDLQA 210 Query: 148 IERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKET 202 R + G +AV VY LI +N+ + + + K + +L + ++ Sbjct: 211 QARC-----HRIGQSKAVKVYRLITRNSYEREMFDKASLKLGLDKAVLQDINRKG 260 >gi|58219008|ref|NP_001010895.1| RAD26L hypothetical protein [Homo sapiens] gi|74756405|sp|Q5T890|RAD26_HUMAN RecName: Full=Putative DNA repair and recombination protein RAD26-like gi|55957855|emb|CAI16517.1| chromosome 9 open reading frame 102 [Homo sapiens] gi|187954497|gb|AAI40703.1| Chromosome 9 open reading frame 102 [Homo sapiens] Length = 712 Score = 85.4 bits (210), Expect = 4e-15, Method: Composition-based stats. Identities = 33/152 (21%), Positives = 61/152 (40%), Gaps = 19/152 (12%) Query: 53 DEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQK---------AFPQGRTLDKDP-CT 100 K+K L+ ++ + N +++ L LQ+ G T ++ Sbjct: 518 SGKMKVLQQLLNHCRKNRDKVLLFSFSTKLLDVLQQYCMASGLDYRRLDGSTKSEERLKI 577 Query: 101 IQEWNE-GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQA 159 ++E+N + + + G GLN G N++V F W+ Q I+R + Sbjct: 578 VKEFNSTQDVNICLVSTMAGGLGLNF-VGANVVVLFDPTWNPANDLQAIDR-----AYRI 631 Query: 160 GFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQ 191 G R V V LI+ T++E++ R K + Sbjct: 632 GQCRDVKVLRLISLGTVEEIMYLRQIYKQQLH 663 >gi|320461545|ref|NP_001189381.1| chromodomain-helicase-DNA-binding protein 8 [Danio rerio] Length = 2549 Score = 85.4 bits (210), Expect = 4e-15, Method: Composition-based stats. Identities = 28/158 (17%), Positives = 58/158 (36%), Gaps = 20/158 (12%) Query: 55 KIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTL----------DKDPCTIQ 102 K+ L+ ++ + A +++ L L+ R L + I Sbjct: 1209 KLVLLDKLLPRLKAGGHKVLIFSQMVRCLDILEDYLIHKRYLYERIDGRVRGNLRQAAID 1268 Query: 103 EWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 +++ + + G G+NL + V F W+ + Q R + G Sbjct: 1269 RFSKPDSDRFVFLLCTRAGGLGINLT-AADTCVIFDSDWNPQNDLQAQARC-----HRIG 1322 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNAL 198 +AV VY LI +N+ + +L + K + +L ++ Sbjct: 1323 QSKAVKVYRLITRNSYEREMLDKASLKLGLDRAVLQSM 1360 >gi|224052526|ref|XP_002188227.1| PREDICTED: excision repair cross-complementing rodent repair deficiency, complementation group 6 [Taeniopygia guttata] Length = 1449 Score = 85.4 bits (210), Expect = 4e-15, Method: Composition-based stats. Identities = 31/130 (23%), Positives = 50/130 (38%), Gaps = 12/130 (9%) Query: 71 IIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGK-IPLLFAHPASCGHGLNLQYGG 129 + V Y S L + + ++NE K I L G G+NL G Sbjct: 831 VFVRYRNYSYL-----RMDGTTAVASRQPLVTKYNEDKSIFLFLLTTRVGGIGVNL-VGA 884 Query: 130 NILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKST 189 + ++ + W+ Q ER + G K+ V VY L+ TI+E + R K Sbjct: 885 DRVIIYDPDWNPSVDTQARERAW-----RIGQKKEVTVYRLLTAGTIEEKIYHRQIFKQF 939 Query: 190 IQDLLLNALK 199 + + +L K Sbjct: 940 LTNRVLKDPK 949 >gi|218202221|gb|EEC84648.1| hypothetical protein OsI_31541 [Oryza sativa Indica Group] Length = 844 Score = 85.4 bits (210), Expect = 4e-15, Method: Composition-based stats. Identities = 20/142 (14%), Positives = 54/142 (38%), Gaps = 18/142 (12%) Query: 66 ANAAPIIVAYHFNSDLARLQK----------AFPQGRTLDKDPCTIQEWN--EGKIPLLF 113 A +++ + L ++ L++ I E+N + + Sbjct: 618 ARKHKVLIFSQWTKVLDIIEYYLETKGLQVCRIDGSVKLEERRRQIAEFNDLNSSMNIFI 677 Query: 114 AHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQ 173 + G G+NL + + + W+ + Q ++R + G R V VY L Sbjct: 678 LSTRAGGLGINLT-SADTCILYDSDWNPQMDLQAMDRC-----HRIGQTRPVHVYRLATS 731 Query: 174 NTIDELVLQRLRTKSTIQDLLL 195 ++++ ++++ K ++ +++ Sbjct: 732 HSVEGRIIKKAFGKLRLEHVVI 753 >gi|195382577|ref|XP_002050006.1| GJ20429 [Drosophila virilis] gi|194144803|gb|EDW61199.1| GJ20429 [Drosophila virilis] Length = 1034 Score = 85.4 bits (210), Expect = 4e-15, Method: Composition-based stats. Identities = 25/125 (20%), Positives = 51/125 (40%), Gaps = 13/125 (10%) Query: 73 VAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGK-IPLLFAHPASCGHGLNLQYGGNI 131 V Y+F L+K + + + E+N + I L + G+NL G N Sbjct: 540 VLYNF------LKKCLDGSTSSQERERLVNEFNANRNIKLFLISTRAGSLGINLT-GANR 592 Query: 132 LVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQ 191 ++ F W+ Q + RI + G + +VY ++ +++ + R K + Sbjct: 593 VIIFDASWNPCHDTQAVYRI-----YRYGQTKPCYVYRIVMDKCLEKKIYDRQIKKQGMS 647 Query: 192 DLLLN 196 D +++ Sbjct: 648 DRIVD 652 >gi|77404417|ref|NP_796198.1| chromodomain-helicase-DNA-binding protein 9 [Mus musculus] gi|76782010|gb|AAZ73184.2| ciprofibrate-bound protein PRIC320 [Mus musculus] Length = 2869 Score = 85.4 bits (210), Expect = 4e-15, Method: Composition-based stats. Identities = 25/146 (17%), Positives = 51/146 (34%), Gaps = 18/146 (12%) Query: 65 KANAAPIIVAYHFNSDLARLQKAFPQGRTL----------DKDPCTIQEWNEGKIP--LL 112 KA +++ L L+ R L + I +++ + Sbjct: 1194 KAGGHKVLIFSQMVRCLDILEDYLIHKRYLYERIDGRVRGNLRQAAIDRFSKPDSDRFVF 1253 Query: 113 FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIA 172 + G G+NL + + F W+ + Q R + G +AV VY L+ Sbjct: 1254 LLCTRAGGLGINLT-AADTCIIFDSDWNPQNDLQAQARC-----HRIGQNKAVKVYRLVT 1307 Query: 173 QNTIDELVLQRLRTKSTIQDLLLNAL 198 +N+ + + R K + +L ++ Sbjct: 1308 RNSYEREMFDRASLKLGLDKAVLQSM 1333 >gi|73946653|ref|XP_860507.1| PREDICTED: similar to SWI/SNF-related matrix-associated actin-dependent regulator of chromatin a2 isoform b isoform 24 [Canis familiaris] Length = 1545 Score = 85.4 bits (210), Expect = 4e-15, Method: Composition-based stats. Identities = 31/160 (19%), Positives = 63/160 (39%), Gaps = 20/160 (12%) Query: 52 HDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAF---------PQGRTLDKDPCT 100 K + L+ I+ +A +++ S + ++ F G T +D Sbjct: 1021 ASGKFELLDRILPKLRATNHRVLLFCQMTSLMTIMEDYFAFRNFLYLRLDGTTKSEDRAA 1080 Query: 101 I-QEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 + +++NE + + + G GLNLQ + +V F W+ + Q R Sbjct: 1081 LLKKFNEPGSQYFIFLLSTRAGGLGLNLQ-AADTVVIFDSDWNPHQDLQA-----QDRAH 1134 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + G + V V L N+++E +L + K + ++ A Sbjct: 1135 RIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQA 1174 >gi|73946665|ref|XP_860704.1| PREDICTED: similar to SWI/SNF-related matrix-associated actin-dependent regulator of chromatin a2 isoform b isoform 30 [Canis familiaris] Length = 1533 Score = 85.4 bits (210), Expect = 4e-15, Method: Composition-based stats. Identities = 31/160 (19%), Positives = 63/160 (39%), Gaps = 20/160 (12%) Query: 52 HDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAF---------PQGRTLDKDPCT 100 K + L+ I+ +A +++ S + ++ F G T +D Sbjct: 1007 ASGKFELLDRILPKLRATNHRVLLFCQMTSLMTIMEDYFAFRNFLYLRLDGTTKSEDRAA 1066 Query: 101 I-QEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 + +++NE + + + G GLNLQ + +V F W+ + Q R Sbjct: 1067 LLKKFNEPGSQYFIFLLSTRAGGLGLNLQ-AADTVVIFDSDWNPHQDLQA-----QDRAH 1120 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + G + V V L N+++E +L + K + ++ A Sbjct: 1121 RIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQA 1160 >gi|73946669|ref|XP_860771.1| PREDICTED: similar to SWI/SNF-related matrix-associated actin-dependent regulator of chromatin a2 isoform b isoform 32 [Canis familiaris] Length = 1586 Score = 85.4 bits (210), Expect = 4e-15, Method: Composition-based stats. Identities = 31/160 (19%), Positives = 63/160 (39%), Gaps = 20/160 (12%) Query: 52 HDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAF---------PQGRTLDKDPCT 100 K + L+ I+ +A +++ S + ++ F G T +D Sbjct: 1032 ASGKFELLDRILPKLRATNHRVLLFCQMTSLMTIMEDYFAFRNFLYLRLDGTTKSEDRAA 1091 Query: 101 I-QEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 + +++NE + + + G GLNLQ + +V F W+ + Q R Sbjct: 1092 LLKKFNEPGSQYFIFLLSTRAGGLGLNLQ-AADTVVIFDSDWNPHQDLQA-----QDRAH 1145 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + G + V V L N+++E +L + K + ++ A Sbjct: 1146 RIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQA 1185 >gi|326479941|gb|EGE03951.1| hypothetical protein TEQG_02985 [Trichophyton equinum CBS 127.97] Length = 561 Score = 85.4 bits (210), Expect = 4e-15, Method: Composition-based stats. Identities = 35/182 (19%), Positives = 71/182 (39%), Gaps = 24/182 (13%) Query: 27 SKTVKCLQLANGAVYYDEEKHWKEVHDE----KIKALEVIIEK---ANAAPIIVAYHFNS 79 ++ C +L + A E+ + +V + KI+AL I+ A +V + S Sbjct: 358 AEIKDCSELVSPAADLGEDCNQVDVESDTLSSKIQALIKILTAKGQAAGTKTVVFSQWTS 417 Query: 80 DLARLQKAFP-----------QGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYG 128 L ++ + + +D + + + ++ A C GLNL Sbjct: 418 FLDLIEPHLVIHNINFARIDGKMNSAKRDAAMGKFSRDSECTVMLASLNVCSVGLNL-VA 476 Query: 129 GNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKS 188 N +V WW Q ++R+ + G R ++ L+ +N+I++ VL + K Sbjct: 477 ANQVVLADSWWAPAIEDQAVDRV-----YRLGQTRPTTIWRLVMENSIEDRVLDIQKEKR 531 Query: 189 TI 190 + Sbjct: 532 EL 533 >gi|256075464|ref|XP_002574039.1| DNA repair and recombination protein rad54-related [Schistosoma mansoni] gi|238659232|emb|CAZ30272.1| DNA repair and recombination protein rad54-related [Schistosoma mansoni] Length = 776 Score = 85.4 bits (210), Expect = 4e-15, Method: Composition-based stats. Identities = 35/142 (24%), Positives = 58/142 (40%), Gaps = 20/142 (14%) Query: 67 NAAPIIVAYHFNSDLARLQKA----------FPQGRTLDK-DPCTIQEWNEGKI--PLLF 113 N ++V +F L L+K G+ +K +Q N+ K +L Sbjct: 468 NDRLVLV-SNFTQTLNLLEKLCNLVTGQPSLRLDGQITNKQRAEVVQRINDPKSHDRILL 526 Query: 114 AHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQ 173 + G GLNL G N L+ F + W+ Q + RI + G R+V +Y L+ Sbjct: 527 LSSRAGGVGLNL-IGANYLILFDMDWNPANDAQAMARIW-----RPGQSRSVNLYRLVTA 580 Query: 174 NTIDELVLQRLRTKSTIQDLLL 195 + ++E + QR K + L Sbjct: 581 SGMEERIFQRQAAKLALTSQTL 602 >gi|109113159|ref|XP_001110923.1| PREDICTED: chromodomain-helicase-DNA-binding protein 3-like isoform 1 [Macaca mulatta] Length = 1947 Score = 85.4 bits (210), Expect = 4e-15, Method: Composition-based stats. Identities = 24/160 (15%), Positives = 52/160 (32%), Gaps = 20/160 (12%) Query: 45 EKHWKEVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQ----------KAFPQGR 92 E K+ L+ ++ K +++ L L+ + G Sbjct: 1033 EGGALIKSSGKLMLLQKMLRKLKEQGHRVLIFSQMTKMLDLLEDFLDYEGYKYERIDGGI 1092 Query: 93 TLDKDPCTIQEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 T I +N + + G G+NL + ++ F W+ Q Sbjct: 1093 TGALRQEAIDRFNAPGAQQFCFLLSTRAGGLGINL-ATADTVIIFDSDWNPHNDIQA--- 1148 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 +R + G V +Y + + +++E + Q + K + Sbjct: 1149 --FSRAHRIGQANKVMIYRFVTRASVEERITQVAKRKMML 1186 >gi|61742812|ref|NP_775544.2| chromodomain helicase DNA binding protein 6 [Mus musculus] gi|126540714|emb|CAM46169.1| chromodomain helicase DNA binding protein 6 [Mus musculus] Length = 2711 Score = 85.4 bits (210), Expect = 4e-15, Method: Composition-based stats. Identities = 25/149 (16%), Positives = 52/149 (34%), Gaps = 18/149 (12%) Query: 66 ANAAPIIVAYHFNSDLARLQKAFPQGR-TLDK---------DPCTIQEWNEGKIP--LLF 113 A +++ L L+ Q R T ++ I + + + Sbjct: 796 AGGHKVLIFSQMVRCLDILEDYLIQRRYTYERIDGRVRGNLRQAAIDRFCKPDSDRFVFL 855 Query: 114 AHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQ 173 + G G+NL + + F W+ + Q R + G +AV VY LI + Sbjct: 856 LCTRAGGLGINLT-AADTCIIFDSDWNPQNDLQAQARC-----HRIGQSKAVKVYRLITR 909 Query: 174 NTIDELVLQRLRTKSTIQDLLLNALKKET 202 N+ + + + K + +L + ++ Sbjct: 910 NSYEREMFDKASLKLGLDKAILQDINRKG 938 >gi|73946675|ref|XP_860860.1| PREDICTED: similar to SWI/SNF-related matrix-associated actin-dependent regulator of chromatin a2 isoform b isoform 34 [Canis familiaris] Length = 1548 Score = 85.4 bits (210), Expect = 4e-15, Method: Composition-based stats. Identities = 31/160 (19%), Positives = 63/160 (39%), Gaps = 20/160 (12%) Query: 52 HDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAF---------PQGRTLDKDPCT 100 K + L+ I+ +A +++ S + ++ F G T +D Sbjct: 1024 ASGKFELLDRILPKLRATNHRVLLFCQMTSLMTIMEDYFAFRNFLYLRLDGTTKSEDRAA 1083 Query: 101 I-QEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 + +++NE + + + G GLNLQ + +V F W+ + Q R Sbjct: 1084 LLKKFNEPGSQYFIFLLSTRAGGLGLNLQ-AADTVVIFDSDWNPHQDLQA-----QDRAH 1137 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + G + V V L N+++E +L + K + ++ A Sbjct: 1138 RIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQA 1177 >gi|260815495|ref|XP_002602508.1| hypothetical protein BRAFLDRAFT_93815 [Branchiostoma floridae] gi|229287819|gb|EEN58520.1| hypothetical protein BRAFLDRAFT_93815 [Branchiostoma floridae] Length = 1002 Score = 85.4 bits (210), Expect = 4e-15, Method: Composition-based stats. Identities = 27/123 (21%), Positives = 46/123 (37%), Gaps = 8/123 (6%) Query: 77 FNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVF 134 F + + + +NE P L + G GLNLQ + +V Sbjct: 453 FQHIEVCVTCCLDGTTKSEDRSQLLHLFNEKDSPYFLFLLSTRAGGLGLNLQ-AADTVVI 511 Query: 135 FSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 F W+ + Q R + G K V V L+ N+++E +L R K + + + Sbjct: 512 FDSDWNPHQDLQA-----QDRAHRIGQKSEVRVLRLMTINSVEEKILAAARFKLNVDEKV 566 Query: 195 LNA 197 + A Sbjct: 567 IQA 569 >gi|148678548|gb|EDL10495.1| mCG140617 [Mus musculus] Length = 1826 Score = 85.4 bits (210), Expect = 4e-15, Method: Composition-based stats. Identities = 24/160 (15%), Positives = 52/160 (32%), Gaps = 20/160 (12%) Query: 45 EKHWKEVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQ----------KAFPQGR 92 E K+ L+ ++ K +++ L L+ + G Sbjct: 873 EGGALIKSSGKLLLLQKMLRKLKEQGHRVLIFSQMTKMLDLLEDFLDYEGYKYERIDGGI 932 Query: 93 TLDKDPCTIQEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 T I +N + + G G+NL + ++ F W+ Q Sbjct: 933 TGALRQEAIDRFNAPGAQQFCFLLSTRAGGLGINL-ATADTVIIFDSDWNPHNDIQA--- 988 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 +R + G V +Y + + +++E + Q + K + Sbjct: 989 --FSRAHRIGQANKVMIYRFVTRASVEERITQVAKRKMML 1026 >gi|126643947|ref|XP_001388153.1| SWI/SNF-related, matrix associated, actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1 [Cryptosporidium parvum Iowa II] gi|126117230|gb|EAZ51330.1| SWI/SNF-related, matrix associated, actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1 [Cryptosporidium parvum Iowa II] Length = 807 Score = 85.4 bits (210), Expect = 4e-15, Method: Composition-based stats. Identities = 38/209 (18%), Positives = 78/209 (37%), Gaps = 26/209 (12%) Query: 2 KQYHKFQRELYC-DLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 K Y + + E Y L I S VK L DE K+K + Sbjct: 599 KGYSRIKVEQYITQLCDYEIHQLVSRLLIVKNSPLLERFRIDDE---LIINGSCKLKKMN 655 Query: 61 VIIEKA---NAAPIIVAYHFNSDLARLQK-------------AFPQGRTLDKDPCTIQEW 104 II+ N ++ H L +++ + + I+++ Sbjct: 656 EIIQSTVIENKEKCLIFCHHTMLLDIIEEYIKIKYNIPDFYLRLDGTTPILERQNMIEKF 715 Query: 105 NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA 164 ++PL + G GLNL + ++ L ++ + +Q +R+ + G + Sbjct: 716 QTTQVPLFLLSTKAAGQGLNLTVASS-VIMMDLDYNPQIEKQAEDRV-----HRIGQSKQ 769 Query: 165 VFVYYLIAQNTIDELVLQRLRTKSTIQDL 193 V ++ L+ ++TI+E + ++K T+ + Sbjct: 770 VKIFKLVCKDTIEENIFNCCQSKLTLDNA 798 >gi|116235005|dbj|BAF34942.1| chromatin remodeling factor DDM1a [Oryza sativa Japonica Group] gi|116235009|dbj|BAF34944.1| chromatin remodeling factor DDM1a [Oryza sativa Japonica Group] gi|222641670|gb|EEE69802.1| hypothetical protein OsJ_29535 [Oryza sativa Japonica Group] Length = 845 Score = 85.4 bits (210), Expect = 4e-15, Method: Composition-based stats. Identities = 20/142 (14%), Positives = 54/142 (38%), Gaps = 18/142 (12%) Query: 66 ANAAPIIVAYHFNSDLARLQK----------AFPQGRTLDKDPCTIQEWN--EGKIPLLF 113 A +++ + L ++ L++ I E+N + + Sbjct: 619 ARKHKVLIFSQWTKVLDIIEYYLETKGLQVCRIDGSVKLEERRRQIAEFNDLNSSMNIFI 678 Query: 114 AHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQ 173 + G G+NL + + + W+ + Q ++R + G R V VY L Sbjct: 679 LSTRAGGLGINLT-SADTCILYDSDWNPQMDLQAMDRC-----HRIGQTRPVHVYRLATS 732 Query: 174 NTIDELVLQRLRTKSTIQDLLL 195 ++++ ++++ K ++ +++ Sbjct: 733 HSVEGRIIKKAFGKLRLEHVVI 754 >gi|62530236|gb|AAX85375.1| chromodomain helicase DNA-binding protein 3 short isoform [Rattus norvegicus] gi|62530238|gb|AAX85376.1| chromodomain helicase DNA-binding protein 3 short isoform [Rattus norvegicus] Length = 1925 Score = 85.4 bits (210), Expect = 4e-15, Method: Composition-based stats. Identities = 24/160 (15%), Positives = 52/160 (32%), Gaps = 20/160 (12%) Query: 45 EKHWKEVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQ----------KAFPQGR 92 E K+ L+ ++ K +++ L L+ + G Sbjct: 1007 EGGALIKSSGKLLLLQKMLRKLKEQGHRVLIFSQMTKMLDLLEDFLDYEGYKYERIDGGI 1066 Query: 93 TLDKDPCTIQEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 T I +N + + G G+NL + ++ F W+ Q Sbjct: 1067 TGALRQEAIDRFNAPGAQQFCFLLSTRAGGLGINL-ATADTVIIFDSDWNPHNDIQA--- 1122 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 +R + G V +Y + + +++E + Q + K + Sbjct: 1123 --FSRAHRIGQANKVMIYRFVTRASVEERITQVAKRKMML 1160 >gi|62530240|gb|AAX85377.1| chromodomain helicase DNA-binding protein 3 short isoform [Rattus norvegicus] Length = 1924 Score = 85.4 bits (210), Expect = 4e-15, Method: Composition-based stats. Identities = 24/160 (15%), Positives = 52/160 (32%), Gaps = 20/160 (12%) Query: 45 EKHWKEVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQ----------KAFPQGR 92 E K+ L+ ++ K +++ L L+ + G Sbjct: 1006 EGGALIKSSGKLLLLQKMLRKLKEQGHRVLIFSQMTKMLDLLEDFLDYEGYKYERIDGGI 1065 Query: 93 TLDKDPCTIQEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 T I +N + + G G+NL + ++ F W+ Q Sbjct: 1066 TGALRQEAIDRFNAPGAQQFCFLLSTRAGGLGINL-ATADTVIIFDSDWNPHNDIQA--- 1121 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 +R + G V +Y + + +++E + Q + K + Sbjct: 1122 --FSRAHRIGQANKVMIYRFVTRASVEERITQVAKRKMML 1159 >gi|62530242|gb|AAX85378.1| chromodomain helicase DNA-binding protein 3 short isoform [Rattus norvegicus] Length = 1927 Score = 85.4 bits (210), Expect = 4e-15, Method: Composition-based stats. Identities = 24/160 (15%), Positives = 52/160 (32%), Gaps = 20/160 (12%) Query: 45 EKHWKEVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQ----------KAFPQGR 92 E K+ L+ ++ K +++ L L+ + G Sbjct: 1009 EGGALIKSSGKLLLLQKMLRKLKEQGHRVLIFSQMTKMLDLLEDFLDYEGYKYERIDGGI 1068 Query: 93 TLDKDPCTIQEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 T I +N + + G G+NL + ++ F W+ Q Sbjct: 1069 TGALRQEAIDRFNAPGAQQFCFLLSTRAGGLGINL-ATADTVIIFDSDWNPHNDIQA--- 1124 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 +R + G V +Y + + +++E + Q + K + Sbjct: 1125 --FSRAHRIGQANKVMIYRFVTRASVEERITQVAKRKMML 1162 >gi|225431683|ref|XP_002264260.1| PREDICTED: hypothetical protein [Vitis vinifera] gi|296088517|emb|CBI37508.3| unnamed protein product [Vitis vinifera] Length = 1043 Score = 85.4 bits (210), Expect = 4e-15, Method: Composition-based stats. Identities = 23/159 (14%), Positives = 56/159 (35%), Gaps = 19/159 (11%) Query: 43 DEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFP---------QGRT 93 ++ + + L+ +I + +++ L +++ G T Sbjct: 680 EKNDNVSSKMSFILALLDTLIPE--GHNVLIFSQTRKMLNLIEELLISNGYKFLRIDGTT 737 Query: 94 L-DKDPCTIQEWNEG-KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERI 151 + + ++ +G P+ G GL L + ++ W+ Q ++R Sbjct: 738 KANDRVKIVNDFQDGVGAPIFLLTSQVGGLGLTLTK-ADRVIVVDPAWNPSTDNQSVDR- 795 Query: 152 GVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 + G + V VY L+ TI+E + ++ K + Sbjct: 796 ----AYRIGQTKDVIVYRLMTCGTIEEKIYRKQIFKGGL 830 >gi|211853152|gb|AAI68553.1| chd9 protein [Xenopus (Silurana) tropicalis] Length = 2753 Score = 85.4 bits (210), Expect = 4e-15, Method: Composition-based stats. Identities = 26/146 (17%), Positives = 51/146 (34%), Gaps = 18/146 (12%) Query: 65 KANAAPIIVAYHFNSDLARLQKAF---------PQGRTL-DKDPCTIQEWNEGKIP--LL 112 KA +++ L L+ GR + I +++ + Sbjct: 1061 KAGGHKVLIFSQMVRCLDILEDYLMHKRYLYERIDGRVRGNLRQAAIDRFSKPDSDRFVF 1120 Query: 113 FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIA 172 + G G+NL + + F W+ + Q R + G +AV VY LI Sbjct: 1121 LLCTRAGGLGINLT-AADTCIIFDSDWNPQNDLQAQARC-----HRIGQNKAVKVYRLIT 1174 Query: 173 QNTIDELVLQRLRTKSTIQDLLLNAL 198 +N+ + + R K + +L ++ Sbjct: 1175 RNSYEREMFDRASLKLGLDKAVLQSM 1200 >gi|51536001|dbj|BAD38081.1| putative chromatin complex subunit A101 [Oryza sativa Japonica Group] Length = 846 Score = 85.4 bits (210), Expect = 4e-15, Method: Composition-based stats. Identities = 20/142 (14%), Positives = 54/142 (38%), Gaps = 18/142 (12%) Query: 66 ANAAPIIVAYHFNSDLARLQK----------AFPQGRTLDKDPCTIQEWN--EGKIPLLF 113 A +++ + L ++ L++ I E+N + + Sbjct: 620 ARKHKVLIFSQWTKVLDIIEYYLETKGLQVCRIDGSVKLEERRRQIAEFNDLNSSMNIFI 679 Query: 114 AHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQ 173 + G G+NL + + + W+ + Q ++R + G R V VY L Sbjct: 680 LSTRAGGLGINLT-SADTCILYDSDWNPQMDLQAMDRC-----HRIGQTRPVHVYRLATS 733 Query: 174 NTIDELVLQRLRTKSTIQDLLL 195 ++++ ++++ K ++ +++ Sbjct: 734 HSVEGRIIKKAFGKLRLEHVVI 755 >gi|291383503|ref|XP_002708309.1| PREDICTED: RAD26L hypothetical protein-like [Oryctolagus cuniculus] Length = 1644 Score = 85.4 bits (210), Expect = 4e-15, Method: Composition-based stats. Identities = 32/152 (21%), Positives = 61/152 (40%), Gaps = 19/152 (12%) Query: 53 DEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQK---------AFPQGRTLDKDP-CT 100 K+K L+ ++ + N +++ L LQ+ G T ++ Sbjct: 495 SGKMKVLQQLLNHCRRNRDKVLLFSFSTKLLDVLQQYCMASGLDYRRLDGSTKSEERLKI 554 Query: 101 IQEWNE-GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQA 159 ++E+N + + + G GLN G N+++ F W+ Q I+R + Sbjct: 555 VKEFNSTQDVNICLVSTMAGGLGLNF-VGANVVILFDPTWNPANDLQAIDR-----AYRI 608 Query: 160 GFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQ 191 G R V V LI+ T++E++ R K + Sbjct: 609 GQCRDVKVLRLISLGTVEEIMYLRQLYKQQLH 640 >gi|148674355|gb|EDL06302.1| chromodomain helicase DNA binding protein 6 [Mus musculus] Length = 2695 Score = 85.4 bits (210), Expect = 4e-15, Method: Composition-based stats. Identities = 25/149 (16%), Positives = 52/149 (34%), Gaps = 18/149 (12%) Query: 66 ANAAPIIVAYHFNSDLARLQKAFPQGR-TLDK---------DPCTIQEWNEGKIP--LLF 113 A +++ L L+ Q R T ++ I + + + Sbjct: 793 AGGHKVLIFSQMVRCLDILEDYLIQRRYTYERIDGRVRGNLRQAAIDRFCKPDSDRFVFL 852 Query: 114 AHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQ 173 + G G+NL + + F W+ + Q R + G +AV VY LI + Sbjct: 853 LCTRAGGLGINLT-AADTCIIFDSDWNPQNDLQAQARC-----HRIGQSKAVKVYRLITR 906 Query: 174 NTIDELVLQRLRTKSTIQDLLLNALKKET 202 N+ + + + K + +L + ++ Sbjct: 907 NSYEREMFDKASLKLGLDKAILQDINRKG 935 >gi|255089631|ref|XP_002506737.1| SNF2 super family [Micromonas sp. RCC299] gi|226522010|gb|ACO67995.1| SNF2 super family [Micromonas sp. RCC299] Length = 1587 Score = 85.4 bits (210), Expect = 4e-15, Method: Composition-based stats. Identities = 27/168 (16%), Positives = 57/168 (33%), Gaps = 29/168 (17%) Query: 53 DEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQ----------KAFPQGRTLDKDPCT 100 K++ L+ ++ + A ++ L L+ + G T Sbjct: 735 SGKLQLLDKLLPRLKAGGHRALIFSQMTRVLDVLEDYCRNRGHSYERLDGGVTGRARQAA 794 Query: 101 IQEWNEGKIP-----------LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIE 149 I + G L + G G+NL + ++ F W+ + Q + Sbjct: 795 IDRFCCGSNATDAGHSDEGAFLFLLSTRAGGQGINL-VAADTVIVFDSDWNPQNDAQALA 853 Query: 150 RIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 R + G + V VY L+ + T + +L R K ++ + ++ Sbjct: 854 R-----AHRIGQTKPVQVYRLVMRATYERDMLDRAAMKLGLEQAIFSS 896 >gi|40215423|gb|AAR82736.1| SD21488p [Drosophila melanogaster] Length = 1645 Score = 85.4 bits (210), Expect = 4e-15, Method: Composition-based stats. Identities = 29/173 (16%), Positives = 63/173 (36%), Gaps = 20/173 (11%) Query: 40 VYYDEEKHWKEVHDEKIKALEVIIEKAN--AAPIIVAYHFNSDLARL-----QKAFPQGR 92 + DE K+ L+ ++ + +++ L L ++ FP R Sbjct: 822 LQQDEALQTLLKGSGKLVLLDKLLCRLKETGHRVLIFSQMVRMLDVLADYLQKRHFPFQR 881 Query: 93 TLDK-----DPCTIQEWN-EGKIPL-LFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQ 145 + +N EG + G G+NL + ++ F W+ + Sbjct: 882 LDGSIKGEMRRQALDHFNAEGSQDFCFLLSTRAGGLGINL-ATADTVIIFDSDWNPQNDL 940 Query: 146 QMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNAL 198 Q R + G K V +Y L+ +++E +++R + K + L++ + Sbjct: 941 QAQAR-----AHRIGQKNQVNIYRLVTARSVEEQIVERAKQKMVLDHLVIQRM 988 >gi|62530244|gb|AAX85379.1| chromodomain helicase DNA-binding protein 3 long isoform [Rattus norvegicus] gi|62530246|gb|AAX85380.1| chromodomain helicase DNA-binding protein 3 long isoform [Rattus norvegicus] gi|62530248|gb|AAX85381.1| chromodomain helicase DNA-binding protein 3 long isoform [Rattus norvegicus] gi|62530250|gb|AAX85382.1| chromodomain helicase DNA-binding protein 3 long isoform [Rattus norvegicus] Length = 1959 Score = 85.4 bits (210), Expect = 4e-15, Method: Composition-based stats. Identities = 24/160 (15%), Positives = 52/160 (32%), Gaps = 20/160 (12%) Query: 45 EKHWKEVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQ----------KAFPQGR 92 E K+ L+ ++ K +++ L L+ + G Sbjct: 1007 EGGALIKSSGKLLLLQKMLRKLKEQGHRVLIFSQMTKMLDLLEDFLDYEGYKYERIDGGI 1066 Query: 93 TLDKDPCTIQEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 T I +N + + G G+NL + ++ F W+ Q Sbjct: 1067 TGALRQEAIDRFNAPGAQQFCFLLSTRAGGLGINL-ATADTVIIFDSDWNPHNDIQA--- 1122 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 +R + G V +Y + + +++E + Q + K + Sbjct: 1123 --FSRAHRIGQANKVMIYRFVTRASVEERITQVAKRKMML 1160 >gi|123241655|emb|CAI35987.2| chromodomain helicase DNA binding protein 3 [Mus musculus] Length = 1885 Score = 85.4 bits (210), Expect = 4e-15, Method: Composition-based stats. Identities = 24/160 (15%), Positives = 52/160 (32%), Gaps = 20/160 (12%) Query: 45 EKHWKEVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQ----------KAFPQGR 92 E K+ L+ ++ K +++ L L+ + G Sbjct: 1009 EGGALIKSSGKLLLLQKMLRKLKEQGHRVLIFSQMTKMLDLLEDFLDYEGYKYERIDGGI 1068 Query: 93 TLDKDPCTIQEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 T I +N + + G G+NL + ++ F W+ Q Sbjct: 1069 TGALRQEAIDRFNAPGAQQFCFLLSTRAGGLGINL-ATADTVIIFDSDWNPHNDIQA--- 1124 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 +R + G V +Y + + +++E + Q + K + Sbjct: 1125 --FSRAHRIGQANKVMIYRFVTRASVEERITQVAKRKMML 1162 >gi|148679122|gb|EDL11069.1| mCG141427 [Mus musculus] Length = 2699 Score = 85.4 bits (210), Expect = 4e-15, Method: Composition-based stats. Identities = 25/146 (17%), Positives = 51/146 (34%), Gaps = 18/146 (12%) Query: 65 KANAAPIIVAYHFNSDLARLQKAFPQGRTL----------DKDPCTIQEWNEGKIP--LL 112 KA +++ L L+ R L + I +++ + Sbjct: 1194 KAGGHKVLIFSQMVRCLDILEDYLIHKRYLYERIDGRVRGNLRQAAIDRFSKPDSDRFVF 1253 Query: 113 FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIA 172 + G G+NL + + F W+ + Q R + G +AV VY L+ Sbjct: 1254 LLCTRAGGLGINLT-AADTCIIFDSDWNPQNDLQAQARC-----HRIGQNKAVKVYRLVT 1307 Query: 173 QNTIDELVLQRLRTKSTIQDLLLNAL 198 +N+ + + R K + +L ++ Sbjct: 1308 RNSYEREMFDRASLKLGLDKAVLQSM 1333 >gi|109113157|ref|XP_001111066.1| PREDICTED: chromodomain-helicase-DNA-binding protein 3-like isoform 2 [Macaca mulatta] Length = 1981 Score = 85.4 bits (210), Expect = 4e-15, Method: Composition-based stats. Identities = 24/160 (15%), Positives = 52/160 (32%), Gaps = 20/160 (12%) Query: 45 EKHWKEVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQ----------KAFPQGR 92 E K+ L+ ++ K +++ L L+ + G Sbjct: 1033 EGGALIKSSGKLMLLQKMLRKLKEQGHRVLIFSQMTKMLDLLEDFLDYEGYKYERIDGGI 1092 Query: 93 TLDKDPCTIQEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 T I +N + + G G+NL + ++ F W+ Q Sbjct: 1093 TGALRQEAIDRFNAPGAQQFCFLLSTRAGGLGINL-ATADTVIIFDSDWNPHNDIQA--- 1148 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 +R + G V +Y + + +++E + Q + K + Sbjct: 1149 --FSRAHRIGQANKVMIYRFVTRASVEERITQVAKRKMML 1186 >gi|301766196|ref|XP_002918518.1| PREDICTED: chromodomain-helicase-DNA-binding protein 6-like, partial [Ailuropoda melanoleuca] Length = 2710 Score = 85.4 bits (210), Expect = 4e-15, Method: Composition-based stats. Identities = 25/149 (16%), Positives = 52/149 (34%), Gaps = 18/149 (12%) Query: 66 ANAAPIIVAYHFNSDLARLQKAFPQGR-TLDK---------DPCTIQEWNEGKIP--LLF 113 A +++ L L+ Q R T ++ I + + + Sbjct: 790 AGGHKVLIFSQMVRCLDILEDYLIQRRYTYERIDGRVRGNLRQAAIDRFCKPDSDRFVFL 849 Query: 114 AHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQ 173 + G G+NL + + F W+ + Q R + G +AV VY LI + Sbjct: 850 LCTRAGGLGINLT-AADTCIIFDSDWNPQNDLQAQARC-----HRIGQSKAVKVYRLITR 903 Query: 174 NTIDELVLQRLRTKSTIQDLLLNALKKET 202 N+ + + + K + +L + ++ Sbjct: 904 NSYEREMFDKASLKLGLDKAVLQDINRKG 932 >gi|291409634|ref|XP_002721122.1| PREDICTED: chromodomain helicase DNA binding protein 6 [Oryctolagus cuniculus] Length = 2717 Score = 85.4 bits (210), Expect = 4e-15, Method: Composition-based stats. Identities = 25/149 (16%), Positives = 52/149 (34%), Gaps = 18/149 (12%) Query: 66 ANAAPIIVAYHFNSDLARLQKAFPQGR-TLDK---------DPCTIQEWNEGKIP--LLF 113 A +++ L L+ Q R T ++ I + + + Sbjct: 795 AGGHKVLIFSQMVRCLDILEDYLIQRRYTYERIDGRVRGNLRQAAIDRFCKPDSDRFVFL 854 Query: 114 AHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQ 173 + G G+NL + + F W+ + Q R + G +AV VY LI + Sbjct: 855 LCTRAGGLGINLT-AADTCIIFDSDWNPQNDLQAQARC-----HRIGQSKAVKVYRLITR 908 Query: 174 NTIDELVLQRLRTKSTIQDLLLNALKKET 202 N+ + + + K + +L + ++ Sbjct: 909 NSYEREMFDKASLKLGLDKAVLQDINRKG 937 >gi|291383314|ref|XP_002708230.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent regulator of chromatin a2-like isoform 1 [Oryctolagus cuniculus] Length = 1595 Score = 85.4 bits (210), Expect = 4e-15, Method: Composition-based stats. Identities = 31/160 (19%), Positives = 63/160 (39%), Gaps = 20/160 (12%) Query: 52 HDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAF---------PQGRTLDKDPCT 100 K + L+ I+ +A +++ S + ++ F G T +D Sbjct: 1053 ASGKFELLDRILPKLRATNHRVLLFCQMTSLMTIMEDYFAFRNFLYLRLDGTTKSEDRAA 1112 Query: 101 I-QEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 + +++NE + + + G GLNLQ + +V F W+ + Q R Sbjct: 1113 LLKKFNEPGSQYFIFLLSTRAGGLGLNLQ-AADTVVIFDSDWNPHQDLQA-----QDRAH 1166 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + G + V V L N+++E +L + K + ++ A Sbjct: 1167 RIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQA 1206 >gi|281352812|gb|EFB28396.1| hypothetical protein PANDA_006982 [Ailuropoda melanoleuca] Length = 2707 Score = 85.4 bits (210), Expect = 4e-15, Method: Composition-based stats. Identities = 25/149 (16%), Positives = 52/149 (34%), Gaps = 18/149 (12%) Query: 66 ANAAPIIVAYHFNSDLARLQKAFPQGR-TLDK---------DPCTIQEWNEGKIP--LLF 113 A +++ L L+ Q R T ++ I + + + Sbjct: 787 AGGHKVLIFSQMVRCLDILEDYLIQRRYTYERIDGRVRGNLRQAAIDRFCKPDSDRFVFL 846 Query: 114 AHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQ 173 + G G+NL + + F W+ + Q R + G +AV VY LI + Sbjct: 847 LCTRAGGLGINLT-AADTCIIFDSDWNPQNDLQAQARC-----HRIGQSKAVKVYRLITR 900 Query: 174 NTIDELVLQRLRTKSTIQDLLLNALKKET 202 N+ + + + K + +L + ++ Sbjct: 901 NSYEREMFDKASLKLGLDKAVLQDINRKG 929 >gi|194751939|ref|XP_001958281.1| GF10842 [Drosophila ananassae] gi|190625563|gb|EDV41087.1| GF10842 [Drosophila ananassae] Length = 1971 Score = 85.4 bits (210), Expect = 4e-15, Method: Composition-based stats. Identities = 23/150 (15%), Positives = 54/150 (36%), Gaps = 20/150 (13%) Query: 55 KIKALEVIIEK--ANAAPIIVAYHFNSDLARLQ----------KAFPQGRTLDKDPCTIQ 102 K+ L ++++ + +++ L L+ + G T I Sbjct: 1038 KLVLLSKMLKQLKSQNHRVLIFSQMTKMLDILEDFLEGEQYKYERIDGGITGTVRQEAID 1097 Query: 103 EWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 +N + + + G G+NL + ++ + W+ Q +R + G Sbjct: 1098 RFNAPGAQQFVFLLSTRAGGLGINL-ATADTVIIYDSDWNPHNDIQA-----FSRAHRIG 1151 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 V +Y + +N+++E V Q + K + Sbjct: 1152 QANKVMIYRFVTRNSVEERVTQVAKRKMML 1181 >gi|148666356|gb|EDK98772.1| SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1`, isoform CRA_b [Mus musculus] Length = 866 Score = 85.4 bits (210), Expect = 4e-15, Method: Composition-based stats. Identities = 31/157 (19%), Positives = 63/157 (40%), Gaps = 19/157 (12%) Query: 51 VHDEKIKALEVIIEKAN--AAPIIVAYHFNSDLARL---------QKAFPQGRT-LDKDP 98 + K +AL I+ + +++ F L L + G+T + + Sbjct: 691 LDSGKFRALGCILSELKQKGDRVVLFSQFTMMLDILEVLLKHHQHRYLRLDGKTQISERI 750 Query: 99 CTIQEWNEG-KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 I E+N I + + G G+NL N+++ + + +Q +R Sbjct: 751 HLIDEFNTDMDIFVFLLSTKAGGLGINLT-SANVVILHDIDCNPYNDKQAEDRC-----H 804 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 + G + V V LI+Q TI+E +L+ + K ++ + Sbjct: 805 RVGQTKEVLVIKLISQGTIEESMLKINQQKLKLEQDM 841 >gi|119596382|gb|EAW75976.1| chromodomain helicase DNA binding protein 6, isoform CRA_c [Homo sapiens] Length = 2750 Score = 85.4 bits (210), Expect = 4e-15, Method: Composition-based stats. Identities = 25/149 (16%), Positives = 52/149 (34%), Gaps = 18/149 (12%) Query: 66 ANAAPIIVAYHFNSDLARLQKAFPQGR-TLDK---------DPCTIQEWNEGKIP--LLF 113 A +++ L L+ Q R T ++ I + + + Sbjct: 832 AGGHKVLIFSQMVRCLDILEDYLIQRRYTYERIDGRVRGNLRQAAIDRFCKPDSDRFVFL 891 Query: 114 AHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQ 173 + G G+NL + + F W+ + Q R + G +AV VY LI + Sbjct: 892 LCTRAGGLGINLT-AADTCIIFDSDWNPQNDLQAQARC-----HRIGQSKAVKVYRLITR 945 Query: 174 NTIDELVLQRLRTKSTIQDLLLNALKKET 202 N+ + + + K + +L + ++ Sbjct: 946 NSYEREMFDKASLKLGLDKAVLQDINRKG 974 >gi|119596384|gb|EAW75978.1| chromodomain helicase DNA binding protein 6, isoform CRA_e [Homo sapiens] Length = 2731 Score = 85.4 bits (210), Expect = 4e-15, Method: Composition-based stats. Identities = 25/149 (16%), Positives = 52/149 (34%), Gaps = 18/149 (12%) Query: 66 ANAAPIIVAYHFNSDLARLQKAFPQGR-TLDK---------DPCTIQEWNEGKIP--LLF 113 A +++ L L+ Q R T ++ I + + + Sbjct: 832 AGGHKVLIFSQMVRCLDILEDYLIQRRYTYERIDGRVRGNLRQAAIDRFCKPDSDRFVFL 891 Query: 114 AHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQ 173 + G G+NL + + F W+ + Q R + G +AV VY LI + Sbjct: 892 LCTRAGGLGINLT-AADTCIIFDSDWNPQNDLQAQARC-----HRIGQSKAVKVYRLITR 945 Query: 174 NTIDELVLQRLRTKSTIQDLLLNALKKET 202 N+ + + + K + +L + ++ Sbjct: 946 NSYEREMFDKASLKLGLDKAVLQDINRKG 974 >gi|119596383|gb|EAW75977.1| chromodomain helicase DNA binding protein 6, isoform CRA_d [Homo sapiens] Length = 1877 Score = 85.4 bits (210), Expect = 4e-15, Method: Composition-based stats. Identities = 25/149 (16%), Positives = 52/149 (34%), Gaps = 18/149 (12%) Query: 66 ANAAPIIVAYHFNSDLARLQKAFPQGR-TLDK---------DPCTIQEWNEGKIP--LLF 113 A +++ L L+ Q R T ++ I + + + Sbjct: 120 AGGHKVLIFSQMVRCLDILEDYLIQRRYTYERIDGRVRGNLRQAAIDRFCKPDSDRFVFL 179 Query: 114 AHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQ 173 + G G+NL + + F W+ + Q R + G +AV VY LI + Sbjct: 180 LCTRAGGLGINLT-AADTCIIFDSDWNPQNDLQAQARC-----HRIGQSKAVKVYRLITR 233 Query: 174 NTIDELVLQRLRTKSTIQDLLLNALKKET 202 N+ + + + K + +L + ++ Sbjct: 234 NSYEREMFDKASLKLGLDKAVLQDINRKG 262 >gi|114682043|ref|XP_001147951.1| PREDICTED: chromodomain helicase DNA binding protein 6 isoform 1 [Pan troglodytes] Length = 2228 Score = 85.4 bits (210), Expect = 4e-15, Method: Composition-based stats. Identities = 25/149 (16%), Positives = 52/149 (34%), Gaps = 18/149 (12%) Query: 66 ANAAPIIVAYHFNSDLARLQKAFPQGR-TLDK---------DPCTIQEWNEGKIP--LLF 113 A +++ L L+ Q R T ++ I + + + Sbjct: 310 AGGHKVLIFSQMVRCLDILEDYLIQRRYTYERIDGRVRGNLRQAAIDRFCKPDSDRFVFL 369 Query: 114 AHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQ 173 + G G+NL + + F W+ + Q R + G +AV VY LI + Sbjct: 370 LCTRAGGLGINLT-AADTCIIFDSDWNPQNDLQAQARC-----HRIGQSKAVKVYRLITR 423 Query: 174 NTIDELVLQRLRTKSTIQDLLLNALKKET 202 N+ + + + K + +L + ++ Sbjct: 424 NSYEREMFDKASLKLGLDKAVLQDINRKG 452 >gi|114682041|ref|XP_001148020.1| PREDICTED: chromodomain helicase DNA binding protein 6 isoform 2 [Pan troglodytes] Length = 2693 Score = 85.4 bits (210), Expect = 4e-15, Method: Composition-based stats. Identities = 25/149 (16%), Positives = 52/149 (34%), Gaps = 18/149 (12%) Query: 66 ANAAPIIVAYHFNSDLARLQKAFPQGR-TLDK---------DPCTIQEWNEGKIP--LLF 113 A +++ L L+ Q R T ++ I + + + Sbjct: 775 AGGHKVLIFSQMVRCLDILEDYLIQRRYTYERIDGRVRGNLRQAAIDRFCKPDSDRFVFL 834 Query: 114 AHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQ 173 + G G+NL + + F W+ + Q R + G +AV VY LI + Sbjct: 835 LCTRAGGLGINLT-AADTCIIFDSDWNPQNDLQAQARC-----HRIGQSKAVKVYRLITR 888 Query: 174 NTIDELVLQRLRTKSTIQDLLLNALKKET 202 N+ + + + K + +L + ++ Sbjct: 889 NSYEREMFDKASLKLGLDKAVLQDINRKG 917 >gi|20521890|dbj|BAA92573.2| KIAA1335 protein [Homo sapiens] Length = 2041 Score = 85.4 bits (210), Expect = 4e-15, Method: Composition-based stats. Identities = 25/149 (16%), Positives = 52/149 (34%), Gaps = 18/149 (12%) Query: 66 ANAAPIIVAYHFNSDLARLQKAFPQGR-TLDK---------DPCTIQEWNEGKIP--LLF 113 A +++ L L+ Q R T ++ I + + + Sbjct: 123 AGGHKVLIFSQMVRCLDILEDYLIQRRYTYERIDGRVRGNLRQAAIDRFCKPDSDRFVFL 182 Query: 114 AHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQ 173 + G G+NL + + F W+ + Q R + G +AV VY LI + Sbjct: 183 LCTRAGGLGINLT-AADTCIIFDSDWNPQNDLQAQARC-----HRIGQSKAVKVYRLITR 236 Query: 174 NTIDELVLQRLRTKSTIQDLLLNALKKET 202 N+ + + + K + +L + ++ Sbjct: 237 NSYEREMFDKASLKLGLDKAVLQDINRKG 265 >gi|328863716|gb|EGG12815.1| hypothetical protein MELLADRAFT_46455 [Melampsora larici-populina 98AG31] Length = 1261 Score = 85.4 bits (210), Expect = 4e-15, Method: Composition-based stats. Identities = 30/162 (18%), Positives = 65/162 (40%), Gaps = 20/162 (12%) Query: 55 KIKALEVIIEK--ANAAPIIVAYH-------FNSDLAR--LQKAFPQGRTLDKDPCTI-Q 102 K + L+ ++ K A +++ + F A ++ G T ++ + + Sbjct: 683 KFELLDRVLPKLFATGHRVLMFFQMTQVMDIFQDYCAYRGIKNLRLDGMTKPEERADLLK 742 Query: 103 EWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 +N I L + G GLNLQ + ++ F W+ + Q R + G Sbjct: 743 TFNHPQCDIHLFILSTRAGGLGLNLQT-ADTVIIFDSDWNPHQDLQA-----QDRAHRIG 796 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKET 202 K+ V V LI +++E ++ + + K + ++ A + + Sbjct: 797 QKKEVRVLRLITSKSVEEHIMSKAQFKLDMDKKVIQAGRFDH 838 >gi|167539947|ref|XP_001741453.1| chromodomain helicase hrp1 [Entamoeba dispar SAW760] gi|165893990|gb|EDR22091.1| chromodomain helicase hrp1, putative [Entamoeba dispar SAW760] Length = 1249 Score = 85.4 bits (210), Expect = 4e-15, Method: Composition-based stats. Identities = 27/158 (17%), Positives = 60/158 (37%), Gaps = 20/158 (12%) Query: 52 HDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFP---------QGRTLDKDPC- 99 K+ L+ ++ K A+ +++ L ++K G +D Sbjct: 619 SSGKLVLLDKLLPKLYADHHKVLIFSQLKKVLNIIEKYLKYKGYFYERLDGSIKSEDRQN 678 Query: 100 TIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 I + ++ + + G G+NL + ++ + W+ + Q R Sbjct: 679 AIDRFMNPEMNRFIFLLCTRAGGFGINLSE-ADTVIIYDSDWNPQNDLQAQARC-----H 732 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 + G K+ V VY L+++NT + + +R K + +L Sbjct: 733 RIGQKKEVKVYRLVSKNTYERYMFERASMKLGLDQAVL 770 >gi|148684276|gb|EDL16223.1| stretch responsive protein 278, isoform CRA_b [Mus musculus] Length = 1546 Score = 85.4 bits (210), Expect = 4e-15, Method: Composition-based stats. Identities = 30/152 (19%), Positives = 60/152 (39%), Gaps = 19/152 (12%) Query: 53 DEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQK---------AFPQGRTLDKDP-CT 100 K+K L+ ++ + +++ L LQ+ G T ++ Sbjct: 514 SGKMKVLQQLLNHFRKQRDKVLLFSFSTKLLDVLQQYCMASGLDYRRLDGSTKSEERLKI 573 Query: 101 IQEWNEG-KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQA 159 ++E+N + + + G GLN G N+++ F W+ Q ++R + Sbjct: 574 VKEFNSSQDVNICLVSTMAGGLGLNF-VGANVVILFDPTWNPANDLQAVDR-----AYRI 627 Query: 160 GFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQ 191 G R V V LI+ T++E++ R K + Sbjct: 628 GQCRDVKVLRLISLGTVEEIMYLRQVYKQQLH 659 >gi|126334594|ref|XP_001365802.1| PREDICTED: similar to BRM protein [Monodelphis domestica] Length = 1570 Score = 85.4 bits (210), Expect = 4e-15, Method: Composition-based stats. Identities = 31/160 (19%), Positives = 63/160 (39%), Gaps = 20/160 (12%) Query: 52 HDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAF---------PQGRTLDKDPCT 100 K + L+ I+ +A +++ S + ++ F G T +D Sbjct: 1046 ASGKFELLDRILPKLRATNHRVLLFCQMTSLMTIMEDYFAFRNFLYLRLDGTTKSEDRAA 1105 Query: 101 I-QEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 + +++NE + + + G GLNLQ + +V F W+ + Q R Sbjct: 1106 LLKKFNEPGSQFFIFLLSTRAGGLGLNLQ-AADTVVIFDSDWNPHQDLQA-----QDRAH 1159 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + G + V V L N+++E +L + K + ++ A Sbjct: 1160 RIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQA 1199 >gi|114682033|ref|XP_001148096.1| PREDICTED: chromodomain helicase DNA binding protein 6 isoform 3 [Pan troglodytes] gi|114682035|ref|XP_001148168.1| PREDICTED: chromodomain helicase DNA binding protein 6 isoform 4 [Pan troglodytes] gi|114682037|ref|XP_001148245.1| PREDICTED: chromodomain helicase DNA binding protein 6 isoform 5 [Pan troglodytes] gi|114682039|ref|XP_001148310.1| PREDICTED: chromodomain helicase DNA binding protein 6 isoform 6 [Pan troglodytes] Length = 2713 Score = 85.4 bits (210), Expect = 4e-15, Method: Composition-based stats. Identities = 25/149 (16%), Positives = 52/149 (34%), Gaps = 18/149 (12%) Query: 66 ANAAPIIVAYHFNSDLARLQKAFPQGR-TLDK---------DPCTIQEWNEGKIP--LLF 113 A +++ L L+ Q R T ++ I + + + Sbjct: 795 AGGHKVLIFSQMVRCLDILEDYLIQRRYTYERIDGRVRGNLRQAAIDRFCKPDSDRFVFL 854 Query: 114 AHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQ 173 + G G+NL + + F W+ + Q R + G +AV VY LI + Sbjct: 855 LCTRAGGLGINLT-AADTCIIFDSDWNPQNDLQAQARC-----HRIGQSKAVKVYRLITR 908 Query: 174 NTIDELVLQRLRTKSTIQDLLLNALKKET 202 N+ + + + K + +L + ++ Sbjct: 909 NSYEREMFDKASLKLGLDKAVLQDINRKG 937 >gi|23193483|gb|AAN14536.1|AF459086_1 SNF2P [Oryza sativa Japonica Group] gi|23193485|gb|AAN14537.1| SNF2P [Oryza sativa Japonica Group] Length = 894 Score = 85.4 bits (210), Expect = 4e-15, Method: Composition-based stats. Identities = 31/176 (17%), Positives = 71/176 (40%), Gaps = 31/176 (17%) Query: 44 EEKHWKEVHDEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQ---------------- 85 E +H + K+ L++I++K + +++ L LQ Sbjct: 361 EGEHLVQ-ASGKLVMLDLILKKLHEVGHRVLLFAQMTQTLDILQDFLELRQYTYERLDGS 419 Query: 86 ----KAFPQGRTLDKDPC--TIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWW 139 + F ++ P +++ N+ + + G GLNL G + ++F+ W Sbjct: 420 VRAEERFAAIKSFSSQPTKGVVRDDNQSGAFVFMISTRAGGVGLNL-IGADTVIFYEQDW 478 Query: 140 DLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 + + +Q ++R + G V L++Q TI+E++++R K + ++ Sbjct: 479 NPQADKQALQR-----AHRIGQLNNVLSINLVSQRTIEEVIMRRAERKLKLSHSVI 529 >gi|311268331|ref|XP_003131999.1| PREDICTED: chromodomain-helicase-DNA-binding protein 3 isoform 1 [Sus scrofa] Length = 1968 Score = 85.4 bits (210), Expect = 4e-15, Method: Composition-based stats. Identities = 24/160 (15%), Positives = 52/160 (32%), Gaps = 20/160 (12%) Query: 45 EKHWKEVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQ----------KAFPQGR 92 E K+ L+ ++ K +++ L L+ + G Sbjct: 1051 EGGALIKASGKLMLLQKMLRKLKEQGHRVLIFSQMTKMLDLLEDFLDYEGYKYERIDGGI 1110 Query: 93 TLDKDPCTIQEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 T I +N + + G G+NL + ++ F W+ Q Sbjct: 1111 TGALRQEAIDRFNAPGAQQFCFLLSTRAGGLGINL-ATADTVIIFDSDWNPHNDIQA--- 1166 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 +R + G V +Y + + +++E + Q + K + Sbjct: 1167 --FSRAHRIGQANKVMIYRFVTRASVEERITQVAKRKMML 1204 >gi|307179332|gb|EFN67696.1| Helicase ARIP4 [Camponotus floridanus] Length = 3060 Score = 85.4 bits (210), Expect = 4e-15, Method: Composition-based stats. Identities = 33/161 (20%), Positives = 57/161 (35%), Gaps = 29/161 (18%) Query: 59 LEVIIEKANAAPIIVAYHFN-----SDLARLQKAFPQGRT------------------LD 95 LE I+ + F LAR P G+T L+ Sbjct: 2017 LEEAIKLGDRVLAFSQSLFTLNLIEDFLARNSVKHPDGQTDAWIKNVNYYRLDGSTSALE 2076 Query: 96 KDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTR 155 ++ + N KI L + G+NL G N + F W+ Q + R Sbjct: 2077 REKLINEFNNNPKIHLFLVSTRAGSLGINL-VGANRAIVFDASWNPCHDTQAV-----CR 2130 Query: 156 QRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + G ++ FVY L+ N ++ + R +K + D +++ Sbjct: 2131 VYRYGQQKPCFVYRLVTDNCLERKIYDRQISKQGMADRVVD 2171 >gi|293358941|ref|XP_232354.4| PREDICTED: chromodomain helicase DNA binding protein 4 [Rattus norvegicus] Length = 1967 Score = 85.4 bits (210), Expect = 4e-15, Method: Composition-based stats. Identities = 19/136 (13%), Positives = 46/136 (33%), Gaps = 18/136 (13%) Query: 67 NAAPIIVAYHFNSDLARLQ----------KAFPQGRTLDKDPCTIQEWNEG--KIPLLFA 114 +++ L L+ + G T + I +N + Sbjct: 1065 GGHRVLIFSQMTKMLDLLEDFLEHEGYKYERIDGGITGNMRQEAIDRFNAPGAQQFCFLL 1124 Query: 115 HPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQN 174 + G G+NL + ++ + W+ Q +R + G + V +Y + + Sbjct: 1125 STRAGGLGINL-ATADTVIIYDSDWNPHNDIQA-----FSRAHRIGQNKKVMIYRFVTRA 1178 Query: 175 TIDELVLQRLRTKSTI 190 +++E + Q + K + Sbjct: 1179 SVEERITQVAKKKMML 1194 >gi|118090021|ref|XP_420485.2| PREDICTED: similar to helicase SMARCAD1 [Gallus gallus] Length = 969 Score = 85.4 bits (210), Expect = 4e-15, Method: Composition-based stats. Identities = 31/162 (19%), Positives = 63/162 (38%), Gaps = 19/162 (11%) Query: 49 KEVHDEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQKAFP---------QGRT-LDK 96 + + K + LE ++ +++ F L L+ G+T + Sbjct: 792 QILDSGKFRVLERLLSDLKEKGDRVVLFSQFTMVLDILEVFLKHWQHRYIRLDGKTQISD 851 Query: 97 DPCTIQEWNEG-KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTR 155 I E+N I + + G G+NL N+++ + + +Q +R Sbjct: 852 RIHLIDEFNTDMDIFVFLLSTKAGGLGINLT-SANVVILHDIDCNPYNDKQAEDRC---- 906 Query: 156 QRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + G R V V LI++ TI+E +L+ + K ++ + A Sbjct: 907 -HRVGQTREVKVIKLISKGTIEESMLKMNQQKLKLEQDMTAA 947 >gi|94707512|sp|Q8BYH8|CHD9_MOUSE RecName: Full=Chromodomain-helicase-DNA-binding protein 9; Short=CHD-9; AltName: Full=ATP-dependent helicase CHD9; AltName: Full=PPAR-alpha-interacting complex protein 320 kDa; AltName: Full=Peroxisomal proliferator-activated receptor A-interacting complex 320 kDa protein Length = 2885 Score = 85.4 bits (210), Expect = 4e-15, Method: Composition-based stats. Identities = 25/146 (17%), Positives = 51/146 (34%), Gaps = 18/146 (12%) Query: 65 KANAAPIIVAYHFNSDLARLQKAFPQGRTL----------DKDPCTIQEWNEGKIP--LL 112 KA +++ L L+ R L + I +++ + Sbjct: 1194 KAGGHKVLIFSQMVRCLDILEDYLIHKRYLYERIDGRVRGNLRQAAIDRFSKPDSDRFVF 1253 Query: 113 FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIA 172 + G G+NL + + F W+ + Q R + G +AV VY L+ Sbjct: 1254 LLCTRAGGLGINLT-AADTCIIFDSDWNPQNDLQAQARC-----HRIGQNKAVKVYRLVT 1307 Query: 173 QNTIDELVLQRLRTKSTIQDLLLNAL 198 +N+ + + R K + +L ++ Sbjct: 1308 RNSYEREMFDRASLKLGLDKAVLQSM 1333 >gi|73997440|ref|XP_853783.1| PREDICTED: similar to chromodomain helicase DNA binding protein 4 isoform 2 [Canis familiaris] Length = 1937 Score = 85.4 bits (210), Expect = 4e-15, Method: Composition-based stats. Identities = 19/136 (13%), Positives = 46/136 (33%), Gaps = 18/136 (13%) Query: 67 NAAPIIVAYHFNSDLARLQ----------KAFPQGRTLDKDPCTIQEWNEG--KIPLLFA 114 +++ L L+ + G T + I +N + Sbjct: 1062 GGHRVLIFSQMTKMLDLLEDFLEHEGYKYERIDGGITGNMRQEAIDRFNAPGAQQFCFLL 1121 Query: 115 HPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQN 174 + G G+NL + ++ + W+ Q +R + G + V +Y + + Sbjct: 1122 STRAGGLGINL-ATADTVIIYDSDWNPHNDIQA-----FSRAHRIGQNKKVMIYRFVTRA 1175 Query: 175 TIDELVLQRLRTKSTI 190 +++E + Q + K + Sbjct: 1176 SVEERITQVAKKKMML 1191 >gi|301771598|ref|XP_002921219.1| PREDICTED: chromodomain-helicase-DNA-binding protein 3-like, partial [Ailuropoda melanoleuca] Length = 1363 Score = 85.4 bits (210), Expect = 5e-15, Method: Composition-based stats. Identities = 25/160 (15%), Positives = 52/160 (32%), Gaps = 20/160 (12%) Query: 45 EKHWKEVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQ----------KAFPQGR 92 E K+ L+ I+ K +++ L L+ + G Sbjct: 411 EGGALIKASGKLMLLQKILRKLKEQGHRVLIFSQMTKMLDLLEDFLDYEGYKYERIDGGI 470 Query: 93 TLDKDPCTIQEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 T I +N + + G G+NL + ++ F W+ Q Sbjct: 471 TGALRQEAIDRFNAPGAQQFCFLLSTRAGGLGINL-ATADTVIIFDSDWNPHNDIQA--- 526 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 +R + G V +Y + + +++E + Q + K + Sbjct: 527 --FSRAHRIGQANKVMIYRFVTRASVEERITQVAKRKMML 564 >gi|294899102|ref|XP_002776495.1| DNA repair protein RAD5, putative [Perkinsus marinus ATCC 50983] gi|239883507|gb|EER08311.1| DNA repair protein RAD5, putative [Perkinsus marinus ATCC 50983] Length = 666 Score = 85.4 bits (210), Expect = 5e-15, Method: Composition-based stats. Identities = 21/94 (22%), Positives = 42/94 (44%), Gaps = 6/94 (6%) Query: 111 LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYL 170 +L + G GLNL G L LWW+ +Q + R+ + G + V +Y Sbjct: 546 VLLVSLRAGGVGLNLT-AGRTLYLLDLWWNPAVEEQAMMRV-----HRLGQQHTVRIYRF 599 Query: 171 IAQNTIDELVLQRLRTKSTIQDLLLNALKKETIH 204 + +++ID+ ++ KS + ++ +A + Sbjct: 600 VVRDSIDQRIMSLQAGKSRLTNMAFDASDAAALQ 633 >gi|219113657|ref|XP_002186412.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1] gi|209583262|gb|ACI65882.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1] Length = 509 Score = 85.4 bits (210), Expect = 5e-15, Method: Composition-based stats. Identities = 25/188 (13%), Positives = 63/188 (33%), Gaps = 32/188 (17%) Query: 36 ANGAVYYDEEKHWKEVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQK------- 86 A+G K L+ ++ + + +++ S L ++ Sbjct: 325 ASGVHLGTAHPQLLVRASGKFALLDRMLSRLYRDGHQVLIFSQMTSVLNVMEDYLLFRNW 384 Query: 87 ---AFPQGRTLDKDPCTIQEWNEGKIP--------------LLFAHPASCGHGLNLQYGG 129 +D+ + ++N K + + G G+NL Sbjct: 385 NFCRIDGSTNIDERQRQMDQFNAEKTAGENGRRSKADDRHFVFLLSTRAGGLGINLT-SA 443 Query: 130 NILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKST 189 + ++ F W+ Q ++R + G V VY L+ N++D ++++ +K Sbjct: 444 DTVIIFDSDWNPHADSQAMDR-----AHRLGQDLPVAVYRLLTVNSVDIEMMEKQISKKK 498 Query: 190 IQDLLLNA 197 ++ + + Sbjct: 499 LERMTIAG 506 >gi|73997442|ref|XP_867901.1| PREDICTED: similar to chromodomain helicase DNA binding protein 4 isoform 22 [Canis familiaris] Length = 1933 Score = 85.4 bits (210), Expect = 5e-15, Method: Composition-based stats. Identities = 19/136 (13%), Positives = 46/136 (33%), Gaps = 18/136 (13%) Query: 67 NAAPIIVAYHFNSDLARLQ----------KAFPQGRTLDKDPCTIQEWNEG--KIPLLFA 114 +++ L L+ + G T + I +N + Sbjct: 1058 GGHRVLIFSQMTKMLDLLEDFLEHEGYKYERIDGGITGNMRQEAIDRFNAPGAQQFCFLL 1117 Query: 115 HPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQN 174 + G G+NL + ++ + W+ Q +R + G + V +Y + + Sbjct: 1118 STRAGGLGINL-ATADTVIIYDSDWNPHNDIQA-----FSRAHRIGQNKKVMIYRFVTRA 1171 Query: 175 TIDELVLQRLRTKSTI 190 +++E + Q + K + Sbjct: 1172 SVEERITQVAKKKMML 1187 >gi|29244924|ref|NP_115597.3| chromodomain-helicase-DNA-binding protein 6 [Homo sapiens] gi|296439466|sp|Q8TD26|CHD6_HUMAN RecName: Full=Chromodomain-helicase-DNA-binding protein 6; Short=CHD-6; AltName: Full=ATP-dependent helicase CHD6; AltName: Full=Radiation-induced gene B protein gi|56203260|emb|CAI22255.1| chromodomain helicase DNA binding protein 6 [Homo sapiens] gi|56203561|emb|CAI21744.1| chromodomain helicase DNA binding protein 6 [Homo sapiens] gi|57208321|emb|CAI42977.1| chromodomain helicase DNA binding protein 6 [Homo sapiens] gi|119596381|gb|EAW75975.1| chromodomain helicase DNA binding protein 6, isoform CRA_b [Homo sapiens] gi|225000154|gb|AAI72397.1| Chromodomain helicase DNA binding protein 6 [synthetic construct] Length = 2715 Score = 85.4 bits (210), Expect = 5e-15, Method: Composition-based stats. Identities = 25/149 (16%), Positives = 52/149 (34%), Gaps = 18/149 (12%) Query: 66 ANAAPIIVAYHFNSDLARLQKAFPQGR-TLDK---------DPCTIQEWNEGKIP--LLF 113 A +++ L L+ Q R T ++ I + + + Sbjct: 797 AGGHKVLIFSQMVRCLDILEDYLIQRRYTYERIDGRVRGNLRQAAIDRFCKPDSDRFVFL 856 Query: 114 AHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQ 173 + G G+NL + + F W+ + Q R + G +AV VY LI + Sbjct: 857 LCTRAGGLGINLT-AADTCIIFDSDWNPQNDLQAQARC-----HRIGQSKAVKVYRLITR 910 Query: 174 NTIDELVLQRLRTKSTIQDLLLNALKKET 202 N+ + + + K + +L + ++ Sbjct: 911 NSYEREMFDKASLKLGLDKAVLQDINRKG 939 >gi|327263457|ref|XP_003216536.1| PREDICTED: probable global transcription activator SNF2L2-like [Anolis carolinensis] Length = 1559 Score = 85.4 bits (210), Expect = 5e-15, Method: Composition-based stats. Identities = 31/160 (19%), Positives = 62/160 (38%), Gaps = 20/160 (12%) Query: 52 HDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAF---------PQGRTLDKDPCT 100 K + L+ I+ +A +++ S + ++ F G T +D Sbjct: 1036 ASGKFELLDRILPKLRATNHRVLLFCQMTSLMTIMEDYFAFRNFAYLRLDGTTKSEDRAA 1095 Query: 101 I-QEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 + +++NE + + G GLNLQ + +V F W+ + Q R Sbjct: 1096 LLKKFNEPNSQYFIFLLSTRAGGLGLNLQ-AADTVVIFDSDWNPHQDLQA-----QDRAH 1149 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + G + V V L N+++E +L + K + ++ A Sbjct: 1150 RIGQQNEVRVLRLCTVNSVEEKILSAAKYKLNVDQKVIQA 1189 >gi|194210904|ref|XP_001497220.2| PREDICTED: similar to Chromodomain helicase DNA binding protein 1-like isoform 1 [Equus caballus] Length = 1006 Score = 85.4 bits (210), Expect = 5e-15, Method: Composition-based stats. Identities = 37/218 (16%), Positives = 82/218 (37%), Gaps = 37/218 (16%) Query: 1 MKQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDE-EKHWKEVHDEKIKA- 58 MK F+ E + ++ N S+ KC + +D E E+ D I+A Sbjct: 409 MKDLDAFENET-----AKKVKLQNVLSQLRKC---VDHPYLFDGVEPEPFEIGDHLIEAS 460 Query: 59 ---------LEVIIEKANAAPIIVAYHFNSDLARLQKAFP---------QGRTLDKDPC- 99 L + +++ +++ L LQ G ++ Sbjct: 461 GKLHLLDKLLAFLYSRSHR--VLLFSQMTQMLDILQDYMDYRGYSYERVDGSVRGEERHL 518 Query: 100 TIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQA 159 I+ + + I + + G G+NL + ++F ++ + Q R + Sbjct: 519 AIKNFGQKPIFIFLLSTRAGGVGMNLT-AADTVIFVDSDFNPQNDLQAAAR-----AHRI 572 Query: 160 GFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 G ++V V LI ++T++E+V ++ +K + + ++ Sbjct: 573 GQNKSVKVIRLIGRDTVEEIVCRKAASKLQLTNTIIEG 610 >gi|73997428|ref|XP_867852.1| PREDICTED: similar to chromodomain helicase DNA binding protein 4 isoform 16 [Canis familiaris] Length = 1756 Score = 85.4 bits (210), Expect = 5e-15, Method: Composition-based stats. Identities = 19/136 (13%), Positives = 46/136 (33%), Gaps = 18/136 (13%) Query: 67 NAAPIIVAYHFNSDLARLQ----------KAFPQGRTLDKDPCTIQEWNEG--KIPLLFA 114 +++ L L+ + G T + I +N + Sbjct: 1058 GGHRVLIFSQMTKMLDLLEDFLEHEGYKYERIDGGITGNMRQEAIDRFNAPGAQQFCFLL 1117 Query: 115 HPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQN 174 + G G+NL + ++ + W+ Q +R + G + V +Y + + Sbjct: 1118 STRAGGLGINL-ATADTVIIYDSDWNPHNDIQA-----FSRAHRIGQNKKVMIYRFVTRA 1171 Query: 175 TIDELVLQRLRTKSTI 190 +++E + Q + K + Sbjct: 1172 SVEERITQVAKKKMML 1187 >gi|19112177|ref|NP_595385.1| SHREC complex subunit Mit1 [Schizosaccharomyces pombe 972h-] gi|74625356|sp|Q9P793|MIT1_SCHPO RecName: Full=Chromatin remodeling factor mit1; AltName: Full=Mi2-like interacting with clr3 protein 1; AltName: Full=Snf2/Hdac-containing repressor complex protein mit1; Short=SHREC protein mit1 gi|7573203|emb|CAB87372.1| SHREC complex subunit Mit1 [Schizosaccharomyces pombe] Length = 1418 Score = 85.4 bits (210), Expect = 5e-15, Method: Composition-based stats. Identities = 24/143 (16%), Positives = 55/143 (38%), Gaps = 18/143 (12%) Query: 68 AAPIIVAYHFNSDLARLQK----------AFPQGRTLDKDPCTIQEWNEG--KIPLLFAH 115 I++ F L L+ F + + I +N ++ Sbjct: 887 GHRILLFSQFIQQLDILEDWFEYKNIAYARFDGASSEMERQSAIDSFNAPNSELSCFLLS 946 Query: 116 PASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNT 175 + G G+NL + ++ ++ + Q I R + G K+ V V+ L +++ Sbjct: 947 TRAGGVGINL-ASADTVIILDPDFNPHQDMQAIAR-----AHRYGQKKKVLVFVLTTRDS 1000 Query: 176 IDELVLQRLRTKSTIQDLLLNAL 198 ++E ++Q + K + L++ +L Sbjct: 1001 VEEKIIQNAQKKLVLDHLIVESL 1023 >gi|24047226|gb|AAH38596.1| CHD4 protein [Homo sapiens] gi|167773199|gb|ABZ92034.1| chromodomain helicase DNA binding protein 4 [synthetic construct] Length = 1937 Score = 85.4 bits (210), Expect = 5e-15, Method: Composition-based stats. Identities = 19/136 (13%), Positives = 46/136 (33%), Gaps = 18/136 (13%) Query: 67 NAAPIIVAYHFNSDLARLQ----------KAFPQGRTLDKDPCTIQEWNEG--KIPLLFA 114 +++ L L+ + G T + I +N + Sbjct: 1062 GGHRVLIFSQMTKMLDLLEDFLEHEGYKYERIDGGITGNMRQEAIDRFNAPGAQQFCFLL 1121 Query: 115 HPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQN 174 + G G+NL + ++ + W+ Q +R + G + V +Y + + Sbjct: 1122 STRAGGLGINL-ATADTVIIYDSDWNPHNDIQA-----FSRAHRIGQNKKVMIYRFVTRA 1175 Query: 175 TIDELVLQRLRTKSTI 190 +++E + Q + K + Sbjct: 1176 SVEERITQVAKKKMML 1191 >gi|301767448|ref|XP_002919141.1| PREDICTED: probable global transcription activator SNF2L2-like [Ailuropoda melanoleuca] Length = 1546 Score = 85.4 bits (210), Expect = 5e-15, Method: Composition-based stats. Identities = 31/160 (19%), Positives = 63/160 (39%), Gaps = 20/160 (12%) Query: 52 HDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAF---------PQGRTLDKDPCT 100 K + L+ I+ +A +++ S + ++ F G T +D Sbjct: 1004 ASGKFELLDRILPKLRATNHRVLLFCQMTSLMTIMEDYFAFRNFLYLRLDGTTKSEDRAA 1063 Query: 101 I-QEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 + +++NE + + + G GLNLQ + +V F W+ + Q R Sbjct: 1064 LLKKFNEPGSQYFIFLLSTRAGGLGLNLQ-AADTVVIFDSDWNPHQDLQA-----QDRAH 1117 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + G + V V L N+++E +L + K + ++ A Sbjct: 1118 RIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQA 1157 >gi|291383316|ref|XP_002708231.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent regulator of chromatin a2-like isoform 2 [Oryctolagus cuniculus] Length = 1577 Score = 85.4 bits (210), Expect = 5e-15, Method: Composition-based stats. Identities = 31/160 (19%), Positives = 63/160 (39%), Gaps = 20/160 (12%) Query: 52 HDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAF---------PQGRTLDKDPCT 100 K + L+ I+ +A +++ S + ++ F G T +D Sbjct: 1053 ASGKFELLDRILPKLRATNHRVLLFCQMTSLMTIMEDYFAFRNFLYLRLDGTTKSEDRAA 1112 Query: 101 I-QEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 + +++NE + + + G GLNLQ + +V F W+ + Q R Sbjct: 1113 LLKKFNEPGSQYFIFLLSTRAGGLGLNLQ-AADTVVIFDSDWNPHQDLQA-----QDRAH 1166 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + G + V V L N+++E +L + K + ++ A Sbjct: 1167 RIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQA 1206 >gi|219518574|gb|AAI45220.1| Chd9 protein [Mus musculus] Length = 2884 Score = 85.4 bits (210), Expect = 5e-15, Method: Composition-based stats. Identities = 25/146 (17%), Positives = 51/146 (34%), Gaps = 18/146 (12%) Query: 65 KANAAPIIVAYHFNSDLARLQKAFPQGRTL----------DKDPCTIQEWNEGKIP--LL 112 KA +++ L L+ R L + I +++ + Sbjct: 1194 KAGGHKVLIFSQMVRCLDILEDYLIHKRYLYERIDGRVRGNLRQAAIDRFSKPDSDRFVF 1253 Query: 113 FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIA 172 + G G+NL + + F W+ + Q R + G +AV VY L+ Sbjct: 1254 LLCTRAGGLGINLT-AADTCIIFDSDWNPQNDLQAQARC-----HRIGQNKAVKVYRLVT 1307 Query: 173 QNTIDELVLQRLRTKSTIQDLLLNAL 198 +N+ + + R K + +L ++ Sbjct: 1308 RNSYEREMFDRASLKLGLDKAVLQSM 1333 >gi|149053041|gb|EDM04858.1| chromodomain helicase DNA binding protein 3 [Rattus norvegicus] Length = 1827 Score = 85.4 bits (210), Expect = 5e-15, Method: Composition-based stats. Identities = 24/160 (15%), Positives = 52/160 (32%), Gaps = 20/160 (12%) Query: 45 EKHWKEVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQ----------KAFPQGR 92 E K+ L+ ++ K +++ L L+ + G Sbjct: 874 EGGALIKSSGKLLLLQKMLRKLKEQGHRVLIFSQMTKMLDLLEDFLDYEGYKYERIDGGI 933 Query: 93 TLDKDPCTIQEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 T I +N + + G G+NL + ++ F W+ Q Sbjct: 934 TGALRQEAIDRFNAPGAQQFCFLLSTRAGGLGINL-ATADTVIIFDSDWNPHNDIQA--- 989 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 +R + G V +Y + + +++E + Q + K + Sbjct: 990 --FSRAHRIGQANKVMIYRFVTRASVEERITQVAKRKMML 1027 >gi|311268329|ref|XP_003132000.1| PREDICTED: chromodomain-helicase-DNA-binding protein 3 isoform 2 [Sus scrofa] Length = 2002 Score = 85.4 bits (210), Expect = 5e-15, Method: Composition-based stats. Identities = 24/160 (15%), Positives = 52/160 (32%), Gaps = 20/160 (12%) Query: 45 EKHWKEVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQ----------KAFPQGR 92 E K+ L+ ++ K +++ L L+ + G Sbjct: 1051 EGGALIKASGKLMLLQKMLRKLKEQGHRVLIFSQMTKMLDLLEDFLDYEGYKYERIDGGI 1110 Query: 93 TLDKDPCTIQEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 T I +N + + G G+NL + ++ F W+ Q Sbjct: 1111 TGALRQEAIDRFNAPGAQQFCFLLSTRAGGLGINL-ATADTVIIFDSDWNPHNDIQA--- 1166 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 +R + G V +Y + + +++E + Q + K + Sbjct: 1167 --FSRAHRIGQANKVMIYRFVTRASVEERITQVAKRKMML 1204 >gi|308163310|gb|EFO65660.1| DNA-dependent ATPase, putative [Giardia lamblia P15] Length = 1276 Score = 85.4 bits (210), Expect = 5e-15, Method: Composition-based stats. Identities = 32/167 (19%), Positives = 63/167 (37%), Gaps = 21/167 (12%) Query: 44 EEKHWKEVHDE--KIKALEVIIEKANAAPIIVAYHFNSDLARLQK----------AFPQG 91 E H V + + L I+ N ++V S L ++ Sbjct: 488 EGDHIVNVSGKMVVLDKLITRIKAINEK-VLVFCQMTSMLNIIEDYLRYREYLYCRIDGS 546 Query: 92 RTLDKDPCTIQEWNEGKIPLL--FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIE 149 L+ +Q +N P+ + GLNL N ++ + ++ + Q + Sbjct: 547 TDLETRAKYMQMFNTPTNPVFVFLLSTRAGCLGLNLT-AANHVIIYQQDFNPQADLQAVA 605 Query: 150 RIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 R + + VFVY L+A+NT+D + +R + K + +L++ Sbjct: 606 R-----AYRLLQTKEVFVYRLLAENTVDTRIYERAQLKLGLDNLIIQ 647 >gi|19421557|gb|AAK56405.1| chromodomain helicase DNA binding protein 5 [Homo sapiens] Length = 2713 Score = 85.4 bits (210), Expect = 5e-15, Method: Composition-based stats. Identities = 25/149 (16%), Positives = 52/149 (34%), Gaps = 18/149 (12%) Query: 66 ANAAPIIVAYHFNSDLARLQKAFPQGR-TLDK---------DPCTIQEWNEGKIP--LLF 113 A +++ L L+ Q R T ++ I + + + Sbjct: 795 AGGHKVLIFSQMVRCLDILEDYLIQRRYTYERIDGRVRGNLRQAAIDRFCKPDSDRFVFL 854 Query: 114 AHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQ 173 + G G+NL + + F W+ + Q R + G +AV VY LI + Sbjct: 855 LCTRAGGLGINLT-AADTCIIFDSDWNPQNDLQAQARC-----HRIGQSKAVKVYRLITR 908 Query: 174 NTIDELVLQRLRTKSTIQDLLLNALKKET 202 N+ + + + K + +L + ++ Sbjct: 909 NSYEREMFDKASLKLGLDKAVLQDINRKG 937 >gi|20152037|gb|AAM11378.1| LD39323p [Drosophila melanogaster] Length = 1101 Score = 85.4 bits (210), Expect = 5e-15, Method: Composition-based stats. Identities = 29/173 (16%), Positives = 63/173 (36%), Gaps = 20/173 (11%) Query: 40 VYYDEEKHWKEVHDEKIKALEVIIEKAN--AAPIIVAYHFNSDLARL-----QKAFPQGR 92 + DE K+ L+ ++ + +++ L L ++ FP R Sbjct: 290 LQQDEALQTLLKGSGKLVLLDKLLCRLKETGHRVLIFSQMVRMLDVLADYLQKRHFPFQR 349 Query: 93 TLDK-----DPCTIQEWN-EGKIPL-LFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQ 145 + +N EG + G G+NL + ++ F W+ + Sbjct: 350 LDGSIKGEMRRQALDHFNAEGSQDFCFLLSTRAGGLGINL-ATADTVIIFDSDWNPQNDL 408 Query: 146 QMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNAL 198 Q R + G K V +Y L+ +++E +++R + K + L++ + Sbjct: 409 QAQAR-----AHRIGQKNQVNIYRLVTARSVEEQIVERAKQKMVLDHLVIQRM 456 >gi|327273061|ref|XP_003221301.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1-like [Anolis carolinensis] Length = 1106 Score = 85.4 bits (210), Expect = 5e-15, Method: Composition-based stats. Identities = 32/160 (20%), Positives = 62/160 (38%), Gaps = 19/160 (11%) Query: 51 VHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARL---------QKAFPQGRTLDKDP- 98 + K + L I+ + +++ F L L + G+T D Sbjct: 931 LDSGKFRTLIHILSEFKEKGNRVVLFSQFTMMLDILEVLLKHEQHRYLRLDGKTQIADRI 990 Query: 99 CTIQEWNEG-KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 I E+N I + + G G+NL N+++ + + +Q +R Sbjct: 991 HLIDEFNSDMGIFIFLLSTKAGGLGINLT-SANVVILHDIDCNPYNDKQAEDRC-----H 1044 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + G R V V LI++ TI+E +L+ + K ++ + A Sbjct: 1045 RVGQTREVKVIRLISKGTIEESMLKISQQKLKLEQDMTAA 1084 >gi|302821505|ref|XP_002992415.1| hypothetical protein SELMODRAFT_162307 [Selaginella moellendorffii] gi|300139831|gb|EFJ06565.1| hypothetical protein SELMODRAFT_162307 [Selaginella moellendorffii] Length = 1016 Score = 85.4 bits (210), Expect = 5e-15, Method: Composition-based stats. Identities = 38/220 (17%), Positives = 79/220 (35%), Gaps = 35/220 (15%) Query: 6 KFQRELYCDLQGENIEAFNSASKTVKCLQLA-----------------NGAVYYDEEKHW 48 + QR Y L ++I+A N+ + + L +A G Y+ E Sbjct: 377 QMQRNYYKALLQKDIDAINTGGERRRLLNIAMQLRKCCNHPYLFQGAEPGPPYFTGEHLV 436 Query: 49 KEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQK----------AFPQGRTLDKDP 98 + + + K ++ +++ L L+ G + + Sbjct: 437 ENSGKMVLLDKLLPKLKQRSSRVLIFSQMTRLLDILEDYCIFRGYPSCRIDGGTSGEDRE 496 Query: 99 CTIQEWNE--GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 I+ +N + + + G G+NL +I++ + W+ + Q R Sbjct: 497 FAIEAFNREGSEKFIFLLSTRAGGLGINL-ATADIVILYDSDWNPQVDLQA-----QDRA 550 Query: 157 RQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + G K+ V V+ Q TI+E V++R K + L++ Sbjct: 551 HRIGQKKEVQVFRFCTQYTIEEKVIERAYKKLALDALVIQ 590 >gi|195038055|ref|XP_001990476.1| GH18228 [Drosophila grimshawi] gi|193894672|gb|EDV93538.1| GH18228 [Drosophila grimshawi] Length = 1336 Score = 85.4 bits (210), Expect = 5e-15, Method: Composition-based stats. Identities = 27/134 (20%), Positives = 54/134 (40%), Gaps = 18/134 (13%) Query: 75 YHFNSDLARLQKAFPQGRTL---------DKDPCTIQEWNEG---KIPLLFAHPASCGHG 122 Y F D+ + ++ QG ++ +++N + L + G G Sbjct: 975 YEFEGDVGNFKGSWIQGEDYFRLDGSCSVEQRESMCKQFNNASNVRARLFLISTRAGGLG 1034 Query: 123 LNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQ 182 +NL N +V F + W+ Q I R+ + G + ++Y LIA T+++ V + Sbjct: 1035 INL-VAANRVVIFDVSWNPSHDTQSIFRV-----YRFGQVKPCYIYRLIAMGTMEQKVYE 1088 Query: 183 RLRTKSTIQDLLLN 196 R K +++ Sbjct: 1089 RQVAKQATAKRVID 1102 >gi|196006111|ref|XP_002112922.1| hypothetical protein TRIADDRAFT_25151 [Trichoplax adhaerens] gi|190584963|gb|EDV25032.1| hypothetical protein TRIADDRAFT_25151 [Trichoplax adhaerens] Length = 678 Score = 85.4 bits (210), Expect = 5e-15, Method: Composition-based stats. Identities = 31/158 (19%), Positives = 63/158 (39%), Gaps = 20/158 (12%) Query: 51 VHDEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQ---------KAFPQGRTLDKDPC 99 KIK L+ ++ +++ F L ++ G+T KD Sbjct: 498 FDSGKIKCLDRLLPLMKERGDRVLLFSQFVMVLDIIECYIQYRGYSYLRMDGQTPIKDRL 557 Query: 100 T-IQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 I ++N+ + + + G G+NL N+++ + ++ +Q +R Sbjct: 558 DLIDQFNDSEADKFIFLLSTKASGLGINLT-SANVVILHDIDFNPHNDKQAEDRC----- 611 Query: 157 RQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 + G + V VY LI +TID+ +LQ K ++ + Sbjct: 612 HRVGQDKDVIVYRLICPDTIDQTMLQFCDNKLHLEKSV 649 >gi|73997414|ref|XP_867801.1| PREDICTED: similar to chromodomain helicase DNA binding protein 4 isoform 9 [Canis familiaris] Length = 1899 Score = 85.4 bits (210), Expect = 5e-15, Method: Composition-based stats. Identities = 19/135 (14%), Positives = 46/135 (34%), Gaps = 17/135 (12%) Query: 67 NAAPIIVAYHFNSDLARLQ----------KAFPQGRTLDKDPCTIQEWNEGKIPL-LFAH 115 +++ L L+ + G T + I +N + Sbjct: 1053 GGHRVLIFSQMTKMLDLLEDFLEHEGYKYERIDGGITGNMRQEAIDRFNGREPDFCFLLS 1112 Query: 116 PASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNT 175 + G G+NL + ++ + W+ Q +R + G + V +Y + + + Sbjct: 1113 TRAGGLGINL-ATADTVIIYDSDWNPHNDIQA-----FSRAHRIGQNKKVMIYRFVTRAS 1166 Query: 176 IDELVLQRLRTKSTI 190 ++E + Q + K + Sbjct: 1167 VEERITQVAKKKMML 1181 >gi|73955627|ref|XP_536627.2| PREDICTED: similar to chromodomain helicase DNA binding protein 3 isoform 3 [Canis familiaris] Length = 1977 Score = 85.4 bits (210), Expect = 5e-15, Method: Composition-based stats. Identities = 24/160 (15%), Positives = 52/160 (32%), Gaps = 20/160 (12%) Query: 45 EKHWKEVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQ----------KAFPQGR 92 E K+ L+ ++ K +++ L L+ + G Sbjct: 1028 EGGALIKASGKLMLLQKMLRKLKEQGHRVLIFSQMTKMLDLLEDFLDYEGYKYERIDGGI 1087 Query: 93 TLDKDPCTIQEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 T I +N + + G G+NL + ++ F W+ Q Sbjct: 1088 TGALRQEAIDRFNAPGAQQFCFLLSTRAGGLGINL-ATADTVIIFDSDWNPHNDIQA--- 1143 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 +R + G V +Y + + +++E + Q + K + Sbjct: 1144 --FSRAHRIGQANKVMIYRFVTRASVEERITQVAKRKMML 1181 >gi|268564215|ref|XP_002639045.1| C. briggsae CBR-TAG-192 protein [Caenorhabditis briggsae] Length = 2869 Score = 85.4 bits (210), Expect = 5e-15, Method: Composition-based stats. Identities = 31/168 (18%), Positives = 57/168 (33%), Gaps = 23/168 (13%) Query: 52 HDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQKAFP---------QGRTL-DKDPC 99 K+ +E ++ K + +++ L L++ G D Sbjct: 1445 ASGKVVLIEKLLPKLRKDGHKVLIFSQMVKVLDLLEEFLITMSYPFERIDGNVRGDMRQA 1504 Query: 100 TIQEW--NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 I + + + G G+NL + ++ F W+ + Q R Sbjct: 1505 AIDRFSKENSDRFVFLLCTRAGGLGINLT-AADTVIIFDSDWNPQNDLQAQARC-----H 1558 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN---ALKKET 202 + G K+ V VY LI NT + + + K + +L ALK E Sbjct: 1559 RIGQKKLVKVYRLITSNTYEREMFDKASLKLGLDKAVLQSTTALKAEG 1606 >gi|316972001|gb|EFV55707.1| domain protein, SNF2 family [Trichinella spiralis] Length = 1787 Score = 85.4 bits (210), Expect = 5e-15, Method: Composition-based stats. Identities = 33/179 (18%), Positives = 67/179 (37%), Gaps = 22/179 (12%) Query: 35 LANGAVYYDE--EKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAF-- 88 +A Y D+ K + L+ ++ K A+ +++ + ++ F Sbjct: 1102 MAEHFGYPDKIVSGPELYRASGKFELLDRVLPKLKASGHRVLLFCQMTCLMTIMEDYFHY 1161 Query: 89 -------PQGRTLDKDP-CTIQEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLW 138 G T +D + ++N + + G GLNLQ + ++ F Sbjct: 1162 RDFKYLRLDGTTKSEDRGELLAKFNAPASDYFIFLLSTRAGGLGLNLQ-AADTVIIFDSD 1220 Query: 139 WDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 W+ + Q R + G R V V L+ N+++E +L R K + + ++ A Sbjct: 1221 WNPHQDIQA-----QDRAHRIGQLREVRVLRLMTVNSVEERILAAARYKLNVDEKVIQA 1274 >gi|308493124|ref|XP_003108752.1| hypothetical protein CRE_11128 [Caenorhabditis remanei] gi|308248492|gb|EFO92444.1| hypothetical protein CRE_11128 [Caenorhabditis remanei] Length = 1496 Score = 85.4 bits (210), Expect = 5e-15, Method: Composition-based stats. Identities = 42/225 (18%), Positives = 78/225 (34%), Gaps = 35/225 (15%) Query: 3 QYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDE-----EKHWKEVH----- 52 Y ++ L D + + A + ++ V +L N + HWK Sbjct: 788 IYRHMKKGLLLDAKMSS-GARSLSNTIVHLRKLCNHPFLFQNIEDSCRAHWKVNEVSGKD 846 Query: 53 ----DEKIKALEVIIEK--ANAAPIIVAYH----------FNSDLARLQKAFPQGRTLDK 96 K++ L+ I+ K A +++ + F D+ Sbjct: 847 LMRVAGKLELLDRILPKLKATGHRVLMFFQMTKMMDIFEDFLHFRNYTYLRLDGSTKPDE 906 Query: 97 DPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 + +N L + G GLNLQ + ++ F W+ + Q Sbjct: 907 RGDLLSLYNAPDSEYFLFMLSTRAGGLGLNLQT-ADTVIIFDSDWNPHQDMQA-----QD 960 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 R + G K+ V V LI N+++E +L R K + + ++ A K Sbjct: 961 RAHRIGQKKEVRVLRLITANSVEEKMLAVARYKLNVDEKVIQAGK 1005 >gi|27502706|gb|AAH42442.1| Smarcad1 protein [Mus musculus] Length = 836 Score = 85.4 bits (210), Expect = 5e-15, Method: Composition-based stats. Identities = 31/157 (19%), Positives = 63/157 (40%), Gaps = 19/157 (12%) Query: 51 VHDEKIKALEVIIEKAN--AAPIIVAYHFNSDLARL---------QKAFPQGRT-LDKDP 98 + K +AL I+ + +++ F L L + G+T + + Sbjct: 661 LDSGKFRALGCILSELKQKGDRVVLFSQFTMMLDILEVLLKHHQHRYLRLDGKTQISERI 720 Query: 99 CTIQEWNEG-KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 I E+N I + + G G+NL N+++ + + +Q +R Sbjct: 721 HLIDEFNTDMDIFVFLLSTKAGGLGINLT-SANVVILHDIDCNPYNDKQAEDRC-----H 774 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 + G + V V LI+Q TI+E +L+ + K ++ + Sbjct: 775 RVGQTKEVLVIKLISQGTIEESMLKINQQKLKLEQDM 811 >gi|309355522|emb|CAP38925.2| CBR-TAG-192 protein [Caenorhabditis briggsae AF16] Length = 2927 Score = 85.4 bits (210), Expect = 5e-15, Method: Composition-based stats. Identities = 31/168 (18%), Positives = 57/168 (33%), Gaps = 23/168 (13%) Query: 52 HDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQKAFP---------QGRTL-DKDPC 99 K+ +E ++ K + +++ L L++ G D Sbjct: 1461 ASGKVVLIEKLLPKLRKDGHKVLIFSQMVKVLDLLEEFLITMSYPFERIDGNVRGDMRQA 1520 Query: 100 TIQEW--NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 I + + + G G+NL + ++ F W+ + Q R Sbjct: 1521 AIDRFSKENSDRFVFLLCTRAGGLGINLT-AADTVIIFDSDWNPQNDLQAQARC-----H 1574 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN---ALKKET 202 + G K+ V VY LI NT + + + K + +L ALK E Sbjct: 1575 RIGQKKLVKVYRLITSNTYEREMFDKASLKLGLDKAVLQSTTALKAEG 1622 >gi|195379440|ref|XP_002048487.1| GJ13998 [Drosophila virilis] gi|194155645|gb|EDW70829.1| GJ13998 [Drosophila virilis] Length = 2012 Score = 85.4 bits (210), Expect = 5e-15, Method: Composition-based stats. Identities = 22/150 (14%), Positives = 54/150 (36%), Gaps = 20/150 (13%) Query: 55 KIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFP----QGRTLDK------DPCTIQ 102 K+ L ++++ + +++ L L+ + +D I Sbjct: 1051 KLVLLSKMLKQLKSQNHRVLIFSQMTKMLDILEDFLEGEQYKYERIDGSITGTVRQEAID 1110 Query: 103 EWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 +N + + + G G+NL + ++ + W+ Q +R + G Sbjct: 1111 RFNAPGAQQFVFLLSTRAGGLGINL-ATADTVIIYDSDWNPHNDIQA-----FSRAHRIG 1164 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 V +Y + +N+++E V Q + K + Sbjct: 1165 QANKVMIYRFVTRNSVEERVTQVAKRKMML 1194 >gi|239609713|gb|EEQ86700.1| DNA excision repair protein [Ajellomyces dermatitidis ER-3] Length = 1026 Score = 85.4 bits (210), Expect = 5e-15, Method: Composition-based stats. Identities = 29/138 (21%), Positives = 49/138 (35%), Gaps = 17/138 (12%) Query: 66 ANAAPIIVAYHFNSDLARLQKAFP----------QGRTLDKDPCTIQEWN-EGKIPLLFA 114 +N ++V H L LQ F + D + +N + + + Sbjct: 628 SNGDKVLVFSHSVRLLKMLQMLFKHTSYNVSYLDGAMSYDDRTKAVDSFNADPREFVFLI 687 Query: 115 HPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQN 174 + G GLN+ N +V W+ Q R + G R V V+ L++ Sbjct: 688 STRAGGVGLNIT-SANKVVVVDPNWNPAYDLQA-----QDRAYRIGQSRDVEVFRLVSAG 741 Query: 175 TIDELVLQRLRTKSTIQD 192 TI+E+V R K + Sbjct: 742 TIEEIVYARQIYKQQQAN 759 >gi|159117623|ref|XP_001709031.1| DNA-dependent ATPase, putative [Giardia lamblia ATCC 50803] gi|157437146|gb|EDO81357.1| DNA-dependent ATPase, putative [Giardia lamblia ATCC 50803] Length = 1276 Score = 85.4 bits (210), Expect = 5e-15, Method: Composition-based stats. Identities = 32/167 (19%), Positives = 63/167 (37%), Gaps = 21/167 (12%) Query: 44 EEKHWKEVHDE--KIKALEVIIEKANAAPIIVAYHFNSDLARLQK----------AFPQG 91 E H V + + L I+ N ++V S L ++ Sbjct: 488 EGDHIVNVSGKMVVLDKLITRIKAINEK-VLVFCQMTSMLNIIEDYLRYREYLYCRIDGS 546 Query: 92 RTLDKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIE 149 L+ +Q +N P + + GLNL N ++ + ++ + Q + Sbjct: 547 TDLETRAKYMQMFNTPTNPAFVFLLSTRAGCLGLNLT-AANHVIIYQQDFNPQADLQAVA 605 Query: 150 RIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 R + + VFVY L+A+NT+D + +R + K + +L++ Sbjct: 606 R-----AYRLLQTKEVFVYRLLAENTVDTRIYERAQLKLGLDNLIIQ 647 >gi|326931681|ref|XP_003211955.1| PREDICTED: chromodomain-helicase-DNA-binding protein 6-like [Meleagris gallopavo] Length = 2658 Score = 85.4 bits (210), Expect = 5e-15, Method: Composition-based stats. Identities = 25/149 (16%), Positives = 52/149 (34%), Gaps = 18/149 (12%) Query: 66 ANAAPIIVAYHFNSDLARLQKAFPQGR-TLDK---------DPCTIQEWNEGKIP--LLF 113 A +++ L L+ Q R T ++ I + + + Sbjct: 791 AGGHKVLIFSQMVRCLDILEDYLIQRRYTYERIDGRVRGNLRQAAIDRFCKPDSDRFVFL 850 Query: 114 AHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQ 173 + G G+NL + + F W+ + Q R + G +AV VY LI + Sbjct: 851 LCTRAGGLGINLT-AADTCIIFDSDWNPQNDLQAQARC-----HRIGQSKAVKVYRLITR 904 Query: 174 NTIDELVLQRLRTKSTIQDLLLNALKKET 202 N+ + + + K + +L + ++ Sbjct: 905 NSYEREMFDKASLKLGLDKAVLQDINRKG 933 >gi|296200471|ref|XP_002806815.1| PREDICTED: LOW QUALITY PROTEIN: chromodomain-helicase-DNA-binding protein 6-like [Callithrix jacchus] Length = 2692 Score = 85.4 bits (210), Expect = 5e-15, Method: Composition-based stats. Identities = 25/149 (16%), Positives = 52/149 (34%), Gaps = 18/149 (12%) Query: 66 ANAAPIIVAYHFNSDLARLQKAFPQGR-TLDK---------DPCTIQEWNEGKIP--LLF 113 A +++ L L+ Q R T ++ I + + + Sbjct: 775 AGGHKVLIFSQMVRCLDILEDYLIQRRYTYERIDGRVRGNLRQAAIDRFCKPDSDRFVFL 834 Query: 114 AHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQ 173 + G G+NL + + F W+ + Q R + G +AV VY LI + Sbjct: 835 LCTRAGGLGINLT-AADTCIIFDSDWNPQNDLQAQARC-----HRIGQSKAVKVYRLITR 888 Query: 174 NTIDELVLQRLRTKSTIQDLLLNALKKET 202 N+ + + + K + +L + ++ Sbjct: 889 NSYEREMFDKASLKLGLDKAVLQDINRKG 917 >gi|281203782|gb|EFA77978.1| myb domain-containing protein [Polysphondylium pallidum PN500] Length = 2536 Score = 85.4 bits (210), Expect = 5e-15, Method: Composition-based stats. Identities = 29/181 (16%), Positives = 61/181 (33%), Gaps = 27/181 (14%) Query: 24 NSASKTVKCLQLANGAVYYD-------EEKHWKEVHDEKIKALEVIIEKANAAPIIVAYH 76 NS + K +Q + V D H + + + L I++ + Sbjct: 742 NSDAIYHKLIQASGKLVLIDKLLPKLKAGNHKVLIFSQMVSVL-DILDD-----YLTFRG 795 Query: 77 FNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVF 134 + R+ + + I ++ + + G G+NL + ++ Sbjct: 796 YLH--ERIDGSIK----AEDRQAAIDRFSAPDSDRFVFLLCTRAGGMGINLT-AADTVII 848 Query: 135 FSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 F W+ + Q R + G + V VY L+ +NT + ++ R K + + Sbjct: 849 FDSDWNPQNDLQAQARC-----HRIGQDKMVKVYRLVTRNTYERIMFDRASKKLGLDRAV 903 Query: 195 L 195 L Sbjct: 904 L 904 >gi|119604572|gb|EAW84166.1| SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, isoform CRA_e [Homo sapiens] Length = 1275 Score = 85.0 bits (209), Expect = 5e-15, Method: Composition-based stats. Identities = 30/160 (18%), Positives = 62/160 (38%), Gaps = 20/160 (12%) Query: 52 HDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAF---------PQGRTLDKDPCT 100 K + L+ I+ +A +++ S + ++ F G T +D Sbjct: 739 ASGKFELLDRILPKLRATNHKVLLFCQMTSLMTIMEDYFAYRGFKYLRLDGTTKAEDRGM 798 Query: 101 I-QEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 + + +NE + + + G GLNLQ + ++ F W+ + Q R Sbjct: 799 LLKTFNEPGSEYFIFLLSTRAGGLGLNLQ-SADTVIIFDSDWNPHQDLQA-----QDRAH 852 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + G + V V L N+++E +L + K + ++ A Sbjct: 853 RIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQA 892 >gi|119604569|gb|EAW84163.1| SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, isoform CRA_b [Homo sapiens] Length = 1274 Score = 85.0 bits (209), Expect = 5e-15, Method: Composition-based stats. Identities = 30/160 (18%), Positives = 62/160 (38%), Gaps = 20/160 (12%) Query: 52 HDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAF---------PQGRTLDKDPCT 100 K + L+ I+ +A +++ S + ++ F G T +D Sbjct: 739 ASGKFELLDRILPKLRATNHKVLLFCQMTSLMTIMEDYFAYRGFKYLRLDGTTKAEDRGM 798 Query: 101 I-QEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 + + +NE + + + G GLNLQ + ++ F W+ + Q R Sbjct: 799 LLKTFNEPGSEYFIFLLSTRAGGLGLNLQ-SADTVIIFDSDWNPHQDLQA-----QDRAH 852 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + G + V V L N+++E +L + K + ++ A Sbjct: 853 RIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQA 892 >gi|255580599|ref|XP_002531123.1| chromodomain helicase DNA binding protein, putative [Ricinus communis] gi|223529287|gb|EEF31257.1| chromodomain helicase DNA binding protein, putative [Ricinus communis] Length = 1718 Score = 85.0 bits (209), Expect = 5e-15, Method: Composition-based stats. Identities = 37/236 (15%), Positives = 81/236 (34%), Gaps = 43/236 (18%) Query: 2 KQYHK--FQR---ELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKH--------- 47 KQY+K +R +L ++G + N + KC N ++ H Sbjct: 833 KQYYKWILERNFHDLNKGVRGNQVSLLNIVVELKKC---CNHPFLFESADHGYGGDSGFN 889 Query: 48 ------WKEVHDEKIKALEVIIEKANAAP--IIVAYHFNSDLARLQKAF---------PQ 90 + K+ L+ ++ + + +++ L L + Sbjct: 890 DSSKLERIILSSGKLVILDKLLVRLHETKHRVLIFSQMVRLLDILAEYLSLRGFQFQRLD 949 Query: 91 GRTLDK-DPCTIQEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQM 147 G T + + +N + G G+NL + ++ F W+ + Q Sbjct: 950 GSTKAELRQQAMDHFNAPGSDDFCFLLSTRAGGLGINL-ATADTVIIFDSDWNPQNDLQA 1008 Query: 148 IERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETI 203 + R + G + V +Y + +++E +L+R + K + L++ L E Sbjct: 1009 MSR-----AHRIGQQEVVNIYRFVTSKSVEEDILERAKKKMVLDHLVIQKLNAEGR 1059 >gi|326512362|dbj|BAJ99536.1| predicted protein [Hordeum vulgare subsp. vulgare] Length = 826 Score = 85.0 bits (209), Expect = 5e-15, Method: Composition-based stats. Identities = 23/158 (14%), Positives = 60/158 (37%), Gaps = 23/158 (14%) Query: 50 EVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQK----------AFPQGRTLDKDPC 99 ++ D + AL I++ + +++ + L L L+ Sbjct: 591 QLLDRLLDAL---IKRNH--KVLIFSQWTKILDILDYYLSEKGLKVCRIDGSVKLEDRRN 645 Query: 100 TIQEWN--EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 I +N + + + G G+NL + + + W+ + Q ++R Sbjct: 646 QIAAFNDLNSGMNVFILSTRAGGLGINLT-SADTCILYDSDWNPQMDLQAMDRC-----H 699 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 + G + V VY L N+++ ++++ K ++ +++ Sbjct: 700 RIGQTQPVHVYRLATSNSVEGRIIKKAFGKLKLEHVVI 737 >gi|302911947|ref|XP_003050605.1| hypothetical protein NECHADRAFT_123411 [Nectria haematococca mpVI 77-13-4] gi|256731542|gb|EEU44892.1| hypothetical protein NECHADRAFT_123411 [Nectria haematococca mpVI 77-13-4] Length = 1066 Score = 85.0 bits (209), Expect = 5e-15, Method: Composition-based stats. Identities = 34/200 (17%), Positives = 66/200 (33%), Gaps = 30/200 (15%) Query: 13 CDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKAL----EVIIEKANA 68 DL+ IE + K N + + ++W KI+ L + + Sbjct: 862 IDLEQPEIEQDEALVKK-------NSIINRIKMENW--TSSSKIELLVHELHKLRSDNAS 912 Query: 69 APIIVAYHFNSDLA----RLQKAFPQGRTLDKDPCTIQEW-------NEGKIPLLFAHPA 117 I+ F + L RL++A LD Q N + Sbjct: 913 HKSIIFSQFTTMLQLIEWRLRRAGITTVMLDGSMTPAQRQASIEHFMNNVDVECFLVSLK 972 Query: 118 SCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 + G LNL + + WW+ Q +R + G R + L +++++ Sbjct: 973 AGGVALNLTEASRVFI-VDPWWNPAAEWQSADRC-----HRIGQTRPCTITRLCIEDSVE 1026 Query: 178 ELVLQRLRTKSTIQDLLLNA 197 ++ K+++ +NA Sbjct: 1027 SRMVLIQEKKTSMIHSTVNA 1046 >gi|73997404|ref|XP_867762.1| PREDICTED: similar to chromodomain helicase DNA binding protein 4 isoform 4 [Canis familiaris] Length = 1949 Score = 85.0 bits (209), Expect = 5e-15, Method: Composition-based stats. Identities = 19/136 (13%), Positives = 46/136 (33%), Gaps = 18/136 (13%) Query: 67 NAAPIIVAYHFNSDLARLQ----------KAFPQGRTLDKDPCTIQEWNEG--KIPLLFA 114 +++ L L+ + G T + I +N + Sbjct: 1058 GGHRVLIFSQMTKMLDLLEDFLEHEGYKYERIDGGITGNMRQEAIDRFNAPGAQQFCFLL 1117 Query: 115 HPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQN 174 + G G+NL + ++ + W+ Q +R + G + V +Y + + Sbjct: 1118 STRAGGLGINL-ATADTVIIYDSDWNPHNDIQA-----FSRAHRIGQNKKVMIYRFVTRA 1171 Query: 175 TIDELVLQRLRTKSTI 190 +++E + Q + K + Sbjct: 1172 SVEERITQVAKKKMML 1187 >gi|73997406|ref|XP_867770.1| PREDICTED: similar to chromodomain helicase DNA binding protein 4 isoform 5 [Canis familiaris] Length = 1910 Score = 85.0 bits (209), Expect = 5e-15, Method: Composition-based stats. Identities = 19/136 (13%), Positives = 46/136 (33%), Gaps = 18/136 (13%) Query: 67 NAAPIIVAYHFNSDLARLQ----------KAFPQGRTLDKDPCTIQEWNEG--KIPLLFA 114 +++ L L+ + G T + I +N + Sbjct: 1043 GGHRVLIFSQMTKMLDLLEDFLEHEGYKYERIDGGITGNMRQEAIDRFNAPGAQQFCFLL 1102 Query: 115 HPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQN 174 + G G+NL + ++ + W+ Q +R + G + V +Y + + Sbjct: 1103 STRAGGLGINL-ATADTVIIYDSDWNPHNDIQA-----FSRAHRIGQNKKVMIYRFVTRA 1156 Query: 175 TIDELVLQRLRTKSTI 190 +++E + Q + K + Sbjct: 1157 SVEERITQVAKKKMML 1172 >gi|73997432|ref|XP_867867.1| PREDICTED: similar to chromodomain helicase DNA binding protein 4 isoform 18 [Canis familiaris] Length = 1760 Score = 85.0 bits (209), Expect = 5e-15, Method: Composition-based stats. Identities = 19/136 (13%), Positives = 46/136 (33%), Gaps = 18/136 (13%) Query: 67 NAAPIIVAYHFNSDLARLQ----------KAFPQGRTLDKDPCTIQEWNEG--KIPLLFA 114 +++ L L+ + G T + I +N + Sbjct: 1058 GGHRVLIFSQMTKMLDLLEDFLEHEGYKYERIDGGITGNMRQEAIDRFNAPGAQQFCFLL 1117 Query: 115 HPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQN 174 + G G+NL + ++ + W+ Q +R + G + V +Y + + Sbjct: 1118 STRAGGLGINL-ATADTVIIYDSDWNPHNDIQA-----FSRAHRIGQNKKVMIYRFVTRA 1171 Query: 175 TIDELVLQRLRTKSTI 190 +++E + Q + K + Sbjct: 1172 SVEERITQVAKKKMML 1187 >gi|73997424|ref|XP_867839.1| PREDICTED: similar to chromodomain helicase DNA binding protein 4 isoform 14 [Canis familiaris] Length = 1779 Score = 85.0 bits (209), Expect = 5e-15, Method: Composition-based stats. Identities = 19/136 (13%), Positives = 46/136 (33%), Gaps = 18/136 (13%) Query: 67 NAAPIIVAYHFNSDLARLQ----------KAFPQGRTLDKDPCTIQEWNEG--KIPLLFA 114 +++ L L+ + G T + I +N + Sbjct: 932 GGHRVLIFSQMTKMLDLLEDFLEHEGYKYERIDGGITGNMRQEAIDRFNAPGAQQFCFLL 991 Query: 115 HPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQN 174 + G G+NL + ++ + W+ Q +R + G + V +Y + + Sbjct: 992 STRAGGLGINL-ATADTVIIYDSDWNPHNDIQA-----FSRAHRIGQNKKVMIYRFVTRA 1045 Query: 175 TIDELVLQRLRTKSTI 190 +++E + Q + K + Sbjct: 1046 SVEERITQVAKKKMML 1061 >gi|73946657|ref|XP_860572.1| PREDICTED: similar to SWI/SNF-related matrix-associated actin-dependent regulator of chromatin a2 isoform b isoform 26 [Canis familiaris] Length = 1498 Score = 85.0 bits (209), Expect = 5e-15, Method: Composition-based stats. Identities = 31/160 (19%), Positives = 63/160 (39%), Gaps = 20/160 (12%) Query: 52 HDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAF---------PQGRTLDKDPCT 100 K + L+ I+ +A +++ S + ++ F G T +D Sbjct: 974 ASGKFELLDRILPKLRATNHRVLLFCQMTSLMTIMEDYFAFRNFLYLRLDGTTKSEDRAA 1033 Query: 101 I-QEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 + +++NE + + + G GLNLQ + +V F W+ + Q R Sbjct: 1034 LLKKFNEPGSQYFIFLLSTRAGGLGLNLQ-AADTVVIFDSDWNPHQDLQA-----QDRAH 1087 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + G + V V L N+++E +L + K + ++ A Sbjct: 1088 RIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQA 1127 >gi|242051170|ref|XP_002463329.1| hypothetical protein SORBIDRAFT_02g041910 [Sorghum bicolor] gi|241926706|gb|EER99850.1| hypothetical protein SORBIDRAFT_02g041910 [Sorghum bicolor] Length = 1685 Score = 85.0 bits (209), Expect = 5e-15, Method: Composition-based stats. Identities = 24/147 (16%), Positives = 52/147 (35%), Gaps = 18/147 (12%) Query: 69 APIIVAYHFNSDLARLQKAF---------PQGRTL-DKDPCTIQEWNEG--KIPLLFAHP 116 +++ L L + G T D ++ +N Sbjct: 883 HRVLIFSQMVKMLDILAEYLSLRGFQFQRLDGSTRADLRHQAMEHFNAPGSDDFCFLLST 942 Query: 117 ASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTI 176 + G G+NL + ++ F W+ + Q + R + G + V +Y + ++ Sbjct: 943 RAGGLGINL-ATADTVIIFDSDWNPQNDLQAMSR-----AHRIGQQETVNIYRFVTCKSV 996 Query: 177 DELVLQRLRTKSTIQDLLLNALKKETI 203 +E +L+R + K + L++ L E Sbjct: 997 EEDILERAKKKMVLDHLVIQKLNAEGR 1023 >gi|149408770|ref|XP_001508504.1| PREDICTED: similar to helicase-like transcription factor [Ornithorhynchus anatinus] Length = 884 Score = 85.0 bits (209), Expect = 5e-15, Method: Composition-based stats. Identities = 27/158 (17%), Positives = 58/158 (36%), Gaps = 23/158 (14%) Query: 51 VHDEKIKALE----VIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTL----------DK 96 + KI AL + +K ++ F + L+ ++K + + K Sbjct: 705 ISSSKINALMHSLIDLRKKNPQTKSLIVSQFTTFLSLIEKPLKESGFVFTRLDGSMPQKK 764 Query: 97 DPCTIQEWNE---GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGV 153 +IQ + G ++ + G GLNL + + W+ Q +R Sbjct: 765 RVESIQCFQSTEAGSPTIMLLSLKAGGVGLNL-SAASRVFLMDPAWNPAAEDQCFDRC-- 821 Query: 154 TRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQ 191 + G K+ V + I +++++E +L+ K + Sbjct: 822 ---HRLGQKQEVVITKFIVKDSVEENMLKIQNKKRELA 856 >gi|73997418|ref|XP_867816.1| PREDICTED: similar to chromodomain helicase DNA binding protein 4 isoform 11 [Canis familiaris] Length = 1899 Score = 85.0 bits (209), Expect = 5e-15, Method: Composition-based stats. Identities = 19/136 (13%), Positives = 46/136 (33%), Gaps = 18/136 (13%) Query: 67 NAAPIIVAYHFNSDLARLQ----------KAFPQGRTLDKDPCTIQEWNEG--KIPLLFA 114 +++ L L+ + G T + I +N + Sbjct: 1052 GGHRVLIFSQMTKMLDLLEDFLEHEGYKYERIDGGITGNMRQEAIDRFNAPGAQQFCFLL 1111 Query: 115 HPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQN 174 + G G+NL + ++ + W+ Q +R + G + V +Y + + Sbjct: 1112 STRAGGLGINL-ATADTVIIYDSDWNPHNDIQA-----FSRAHRIGQNKKVMIYRFVTRA 1165 Query: 175 TIDELVLQRLRTKSTI 190 +++E + Q + K + Sbjct: 1166 SVEERITQVAKKKMML 1181 >gi|270001259|gb|EEZ97706.1| brahma [Tribolium castaneum] Length = 1649 Score = 85.0 bits (209), Expect = 5e-15, Method: Composition-based stats. Identities = 29/160 (18%), Positives = 60/160 (37%), Gaps = 20/160 (12%) Query: 52 HDEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQ---------KAFPQGRTLDKDPCT 100 K + L+ I+ K +++ + ++ G T +D Sbjct: 1158 ASGKFELLDRILPKLKVTGHRVLLFCQMTQLMTIMEDYLSWRGFGYLRLDGTTKAEDRGD 1217 Query: 101 I-QEWN--EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 + +++N L + G GLNLQ + ++ F W+ + Q R Sbjct: 1218 LLKKFNAKNSDYFLFLLSTRAGGLGLNLQ-SADTVIIFDSDWNPHQDLQA-----QDRAH 1271 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + G + V V L+ N+++E +L R K + + ++ A Sbjct: 1272 RIGQQNEVRVLRLMTVNSVEERILAAARYKLNMDEKVIQA 1311 >gi|294876194|ref|XP_002767598.1| DNA repair helicase, putative [Perkinsus marinus ATCC 50983] gi|239869258|gb|EER00316.1| DNA repair helicase, putative [Perkinsus marinus ATCC 50983] Length = 511 Score = 85.0 bits (209), Expect = 5e-15, Method: Composition-based stats. Identities = 21/94 (22%), Positives = 42/94 (44%), Gaps = 6/94 (6%) Query: 111 LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYL 170 +L + G GLNL G L LWW+ +Q + R+ + G + V +Y Sbjct: 391 VLLVSLRAGGVGLNLT-AGRTLYLLDLWWNPAVEEQAMMRV-----HRLGQQHTVRIYRF 444 Query: 171 IAQNTIDELVLQRLRTKSTIQDLLLNALKKETIH 204 + +++ID+ ++ KS + ++ +A + Sbjct: 445 VVRDSIDQRIMSLQAGKSRLTNMAFDASDAAALQ 478 >gi|195158016|ref|XP_002019890.1| GL11967 [Drosophila persimilis] gi|194116481|gb|EDW38524.1| GL11967 [Drosophila persimilis] Length = 220 Score = 85.0 bits (209), Expect = 5e-15, Method: Composition-based stats. Identities = 24/75 (32%), Positives = 41/75 (54%), Gaps = 7/75 (9%) Query: 132 LVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQ 191 ++F+ W+ QQ ++R + G + V VY LI + TI+E +LQR R KS IQ Sbjct: 3 VIFYDSDWNPTVDQQAMDR-----AHRLGQTKQVTVYRLICKGTIEERILQRAREKSEIQ 57 Query: 192 DLLLNA--LKKETIH 204 ++++ K +T+ Sbjct: 58 RMVISGGNFKPDTLK 72 >gi|62751341|ref|NP_001015697.1| SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1 [Xenopus (Silurana) tropicalis] gi|58618908|gb|AAH89242.1| SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1 [Xenopus (Silurana) tropicalis] Length = 1003 Score = 85.0 bits (209), Expect = 5e-15, Method: Composition-based stats. Identities = 29/157 (18%), Positives = 60/157 (38%), Gaps = 19/157 (12%) Query: 51 VHDEKIKALEVIIEKANAAP--IIVAYHFNSDLARL---------QKAFPQGRT-LDKDP 98 + K LE ++ +++ F L + + G+T + + Sbjct: 828 LDSGKFNILEKLLSDIKKKGDRVVLFSQFTMMLDIIEVFLRHHQHRYVRLDGKTQISERI 887 Query: 99 CTIQEWNEG-KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 I E+N I + + G G+NL NI++ + + +Q +R Sbjct: 888 HLIDEFNTDMDIFIFLLSTKAGGLGINLT-SANIVILHDIDCNPYNDKQAEDRC-----H 941 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 + G + V V LI + TI+E +L+ + K ++ + Sbjct: 942 RVGQTKEVKVIKLIGKGTIEESMLKISQQKLRLEQDM 978 >gi|321468122|gb|EFX79109.1| hypothetical protein DAPPUDRAFT_319863 [Daphnia pulex] Length = 4355 Score = 85.0 bits (209), Expect = 5e-15, Method: Composition-based stats. Identities = 23/146 (15%), Positives = 52/146 (35%), Gaps = 18/146 (12%) Query: 65 KANAAPIIVAYHFNSDLARLQKAF---------PQGRTL-DKDPCTIQEWNEGKIP--LL 112 KA+ +++ L L+ GR + I + + + Sbjct: 2035 KADGHRVLIFSQMVRCLDILEDYLIYRKYPYERLDGRIRGNMRQAAIDRYCKPDSDRFVF 2094 Query: 113 FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIA 172 + G G+NL + ++ + W+ + Q R + G K+ V +Y L+ Sbjct: 2095 LLCTKAGGLGINLT-AADTVIIYDSDWNPQNDLQAQARC-----HRIGQKKMVKIYRLLT 2148 Query: 173 QNTIDELVLQRLRTKSTIQDLLLNAL 198 +NT + + + K + +L ++ Sbjct: 2149 RNTYEREMFDKASLKLGLDKAVLQSM 2174 >gi|119603203|gb|EAW82797.1| chromodomain helicase DNA binding protein 9, isoform CRA_e [Homo sapiens] Length = 2823 Score = 85.0 bits (209), Expect = 5e-15, Method: Composition-based stats. Identities = 25/146 (17%), Positives = 51/146 (34%), Gaps = 18/146 (12%) Query: 65 KANAAPIIVAYHFNSDLARLQKAFPQGRTL----------DKDPCTIQEWNEGKIP--LL 112 KA +++ L L+ R L + I +++ + Sbjct: 1137 KAGGHKVLIFSQMVRCLDILEDYLIHKRYLYERIDGRVRGNLRQAAIDRFSKPDSDRFVF 1196 Query: 113 FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIA 172 + G G+NL + + F W+ + Q R + G +AV VY L+ Sbjct: 1197 LLCTRAGGLGINLT-AADTCIIFDSDWNPQNDLQAQARC-----HRIGQNKAVKVYRLVT 1250 Query: 173 QNTIDELVLQRLRTKSTIQDLLLNAL 198 +N+ + + R K + +L ++ Sbjct: 1251 RNSYEREMFDRASLKLGLDKAVLQSM 1276 >gi|194224690|ref|XP_001916162.1| PREDICTED: similar to RAD26L hypothetical protein [Equus caballus] Length = 1481 Score = 85.0 bits (209), Expect = 5e-15, Method: Composition-based stats. Identities = 34/152 (22%), Positives = 61/152 (40%), Gaps = 19/152 (12%) Query: 53 DEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQK---------AFPQGRTLDKDP-CT 100 K+K L+ ++ + N +++ L LQ+ G T +D Sbjct: 450 SGKMKVLQQLLNHCRKNKDKVLLFSFSTKLLDVLQQYCMASGLDYRRLDGNTKSEDRIKI 509 Query: 101 IQEWNE-GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQA 159 ++E+N + + + G GLN G N++V F W+ Q I+R + Sbjct: 510 VKEFNSTQDVNICLVSTMAGGLGLNF-VGANVVVLFDPTWNPANDLQAIDR-----AYRI 563 Query: 160 GFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQ 191 G R V V LI+ T++E++ R K + Sbjct: 564 GQCRDVKVLRLISLGTVEEIMYLRQVYKQQLH 595 >gi|145497571|ref|XP_001434774.1| hypothetical protein [Paramecium tetraurelia strain d4-2] gi|124401902|emb|CAK67377.1| unnamed protein product [Paramecium tetraurelia] Length = 954 Score = 85.0 bits (209), Expect = 5e-15, Method: Composition-based stats. Identities = 25/117 (21%), Positives = 53/117 (45%), Gaps = 10/117 (8%) Query: 80 DLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWW 139 + ++Q + ++ +I+++ E +I ++ + +G+NL N ++ WW Sbjct: 824 EFRKIQGKMDK----NQRKASIKDFFEKQITVMLISLKAGAYGINLSC-ANHVLLVDPWW 878 Query: 140 DLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + Q +ER+ + G ++ V + I NTI+E VLQ + K + L Sbjct: 879 NPAVEDQAVERV-----HRLGQQKQVQIVSFICDNTIEERVLQMHKMKRQLFKDALQ 930 >gi|114643075|ref|XP_001162434.1| PREDICTED: hypothetical protein isoform 1 [Pan troglodytes] Length = 1921 Score = 85.0 bits (209), Expect = 5e-15, Method: Composition-based stats. Identities = 19/136 (13%), Positives = 46/136 (33%), Gaps = 18/136 (13%) Query: 67 NAAPIIVAYHFNSDLARLQ----------KAFPQGRTLDKDPCTIQEWNEG--KIPLLFA 114 +++ L L+ + G T + I +N + Sbjct: 1046 GGHRVLIFSQMTKMLDLLEDFLEHEGYKYERIDGGITGNMRQEAIDRFNAPGAQQFCFLL 1105 Query: 115 HPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQN 174 + G G+NL + ++ + W+ Q +R + G + V +Y + + Sbjct: 1106 STRAGGLGINL-ATADTVIIYDSDWNPHNDIQA-----FSRAHRIGQNKKVMIYRFVTRA 1159 Query: 175 TIDELVLQRLRTKSTI 190 +++E + Q + K + Sbjct: 1160 SVEERITQVAKKKMML 1175 >gi|195035285|ref|XP_001989108.1| GH10228 [Drosophila grimshawi] gi|193905108|gb|EDW03975.1| GH10228 [Drosophila grimshawi] Length = 5820 Score = 85.0 bits (209), Expect = 5e-15, Method: Composition-based stats. Identities = 23/146 (15%), Positives = 53/146 (36%), Gaps = 18/146 (12%) Query: 65 KANAAPIIVAYHFNSDLARLQKAF---------PQGRTL-DKDPCTIQEWNEG--KIPLL 112 KAN +++ L L+ GR + I +++ + Sbjct: 2643 KANGHRVLIFSQMVRCLDILEDYLVYRKYPFERIDGRIRGNLRQEAIDRYSKPGSDRFVF 2702 Query: 113 FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIA 172 + G G+NL + ++ + W+ + Q R + G ++ V +Y L+ Sbjct: 2703 LLCTKAGGLGINLT-AADTVIIYDSDWNPQNDLQAQARC-----HRIGQRKMVKIYRLLC 2756 Query: 173 QNTIDELVLQRLRTKSTIQDLLLNAL 198 +NT + + + K + +L ++ Sbjct: 2757 RNTYEREMFDKASMKLGLDKAVLQSM 2782 >gi|114675380|ref|XP_512384.2| PREDICTED: SWI/SNF-related matrix-associated actin-dependent regulator of chromatin a4 [Pan troglodytes] Length = 1657 Score = 85.0 bits (209), Expect = 5e-15, Method: Composition-based stats. Identities = 30/160 (18%), Positives = 62/160 (38%), Gaps = 20/160 (12%) Query: 52 HDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAF---------PQGRTLDKDPCT 100 K + L+ I+ +A +++ S + ++ F G T +D Sbjct: 1087 ASGKFELLDRILPKLRATNHKVLLFCQMTSLMTIMEDYFAYRGFKYLRLDGTTKAEDRGM 1146 Query: 101 I-QEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 + + +NE + + + G GLNLQ + ++ F W+ + Q R Sbjct: 1147 LLKTFNEPGSEYFIFLLSTRAGGLGLNLQ-SADTVIIFDSDWNPHQDLQA-----QDRAH 1200 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + G + V V L N+++E +L + K + ++ A Sbjct: 1201 RIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQA 1240 >gi|49022903|dbj|BAC41410.3| mKIAA0308 protein [Mus musculus] Length = 1890 Score = 85.0 bits (209), Expect = 5e-15, Method: Composition-based stats. Identities = 25/146 (17%), Positives = 51/146 (34%), Gaps = 18/146 (12%) Query: 65 KANAAPIIVAYHFNSDLARLQKAFPQGRTL----------DKDPCTIQEWNEGKIP--LL 112 KA +++ L L+ R L + I +++ + Sbjct: 215 KAGGHKVLIFSQMVRCLDILEDYLIHKRYLYERIDGRVRGNLRQAAIDRFSKPDSDRFVF 274 Query: 113 FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIA 172 + G G+NL + + F W+ + Q R + G +AV VY L+ Sbjct: 275 LLCTRAGGLGINLT-AADTCIIFDSDWNPQNDLQAQARC-----HRIGQNKAVKVYRLVT 328 Query: 173 QNTIDELVLQRLRTKSTIQDLLLNAL 198 +N+ + + R K + +L ++ Sbjct: 329 RNSYEREMFDRASLKLGLDKAVLQSM 354 >gi|62319947|dbj|BAD94038.1| pseudogene [Arabidopsis thaliana] Length = 1221 Score = 85.0 bits (209), Expect = 5e-15, Method: Composition-based stats. Identities = 27/181 (14%), Positives = 63/181 (34%), Gaps = 20/181 (11%) Query: 37 NGAVYYDEEKHWKEVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQKAF------ 88 G + + + + K+ L+ ++ + +++ L L + Sbjct: 922 GGDINDNSKLDKIILSSGKLVILDKLLVRLRETKHRVLIFSQMVRMLDILAEYLSLRGFQ 981 Query: 89 ---PQGRTLDK-DPCTIQEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLE 142 G T + + +N + G G+NL + +V F W+ + Sbjct: 982 FQRLDGSTKAELRQQAMDHFNAPASDDFCFLLSTRAGGLGINL-ATADTVVIFDSDWNPQ 1040 Query: 143 EHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKET 202 Q + R + G + V +Y + +++E +L+R + K + L++ L E Sbjct: 1041 NDLQAMSR-----AHRIGQQEVVNIYRFVTSKSVEEEILERAKRKMVLDHLVIQKLNAEG 1095 Query: 203 I 203 Sbjct: 1096 R 1096 >gi|332020038|gb|EGI60489.1| Helicase ARIP4 [Acromyrmex echinatior] Length = 3091 Score = 85.0 bits (209), Expect = 5e-15, Method: Composition-based stats. Identities = 33/161 (20%), Positives = 58/161 (36%), Gaps = 29/161 (18%) Query: 59 LEVIIEKANAAPIIVAYHFN-----SDLARLQKAFPQGRT------------------LD 95 LE I+ + F LAR +P G+T L+ Sbjct: 2029 LEEAIKLGDRVLAFSQSLFTLNLIEDFLARNSLKYPDGQTDAWIKNVNYYRLDGSTSALE 2088 Query: 96 KDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTR 155 ++ + N KI L + G+NL G N + F W+ Q + R Sbjct: 2089 REKLINEFNNNPKIHLFLVSTRAGSLGINL-VGANRAIVFDASWNPCHDTQAV-----CR 2142 Query: 156 QRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + G ++ FVY L+ N ++ + R +K + D +++ Sbjct: 2143 VYRYGQQKPCFVYRLVTDNCLERKIYDRQISKQGMADRVVD 2183 >gi|324500342|gb|ADY40163.1| Chromodomain-helicase-DNA-binding protein 8 [Ascaris suum] Length = 1811 Score = 85.0 bits (209), Expect = 5e-15, Method: Composition-based stats. Identities = 22/145 (15%), Positives = 49/145 (33%), Gaps = 18/145 (12%) Query: 65 KANAAPIIVAYHFNSDLARLQK----------AFPQGRTLDKDPCTIQEWNEGKIP--LL 112 +A+ +++ L +++ D I +++ + Sbjct: 1416 RADGHKVLIFSQMVRVLDIIEEFLVVQNYTFERIDGNVRGDLRQTAIDRFSKKDSDRFVF 1475 Query: 113 FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIA 172 + G G+NL + ++ F W+ + Q R + G + V VY LI Sbjct: 1476 LLCTRAGGLGINLT-AADTVIIFDSDWNPQNDLQAQARC-----HRIGQTKMVKVYRLIT 1529 Query: 173 QNTIDELVLQRLRTKSTIQDLLLNA 197 NT + + + K + +L + Sbjct: 1530 CNTYEREMFDKASLKLGLDKAVLQS 1554 >gi|331230613|ref|XP_003327971.1| SNF2 family ATP-dependent chromatin-remodeling factor snf22 [Puccinia graminis f. sp. tritici CRL 75-36-700-3] gi|309306961|gb|EFP83552.1| SNF2 family ATP-dependent chromatin-remodeling factor snf22 [Puccinia graminis f. sp. tritici CRL 75-36-700-3] Length = 1537 Score = 85.0 bits (209), Expect = 5e-15, Method: Composition-based stats. Identities = 29/162 (17%), Positives = 65/162 (40%), Gaps = 20/162 (12%) Query: 55 KIKALEVIIEKA--NAAPIIVAYH-------FNSDLAR--LQKAFPQGRTL-DKDPCTIQ 102 K + L+ ++ K +++ + F A ++ G T ++ ++ Sbjct: 872 KFELLDRVLPKLFRTGHRVLMFFQMTQVMDIFQDYCAYRGIKNLRLDGMTKPEERAELLK 931 Query: 103 EWNEGK--IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 +N + I L + G GLNLQ + ++ F W+ + Q R + G Sbjct: 932 TFNHPECGINLFILSTRAGGLGLNLQT-ADTVIIFDSDWNPHQDLQA-----QDRAHRIG 985 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKET 202 K+ V V LI +++E ++ + + K + ++ A + + Sbjct: 986 QKKEVRVLRLITSKSVEEHIMSKAQFKLDMDKKVIQAGRFDH 1027 >gi|293340184|ref|XP_001079343.2| PREDICTED: chromodomain helicase DNA binding protein 3 [Rattus norvegicus] Length = 2046 Score = 85.0 bits (209), Expect = 5e-15, Method: Composition-based stats. Identities = 24/160 (15%), Positives = 52/160 (32%), Gaps = 20/160 (12%) Query: 45 EKHWKEVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQ----------KAFPQGR 92 E K+ L+ ++ K +++ L L+ + G Sbjct: 1128 EGGALIKSSGKLLLLQKMLRKLKEQGHRVLIFSQMTKMLDLLEDFLDYEGYKYERIDGGI 1187 Query: 93 TLDKDPCTIQEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 T I +N + + G G+NL + ++ F W+ Q Sbjct: 1188 TGALRQEAIDRFNAPGAQQFCFLLSTRAGGLGINL-ATADTVIIFDSDWNPHNDIQA--- 1243 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 +R + G V +Y + + +++E + Q + K + Sbjct: 1244 --FSRAHRIGQANKVMIYRFVTRASVEERITQVAKRKMML 1281 >gi|193203140|ref|NP_491426.2| Temporarily Assigned Gene name family member (tag-192) [Caenorhabditis elegans] Length = 2967 Score = 85.0 bits (209), Expect = 5e-15, Method: Composition-based stats. Identities = 31/168 (18%), Positives = 57/168 (33%), Gaps = 23/168 (13%) Query: 52 HDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQKAFP---------QGRTL-DKDPC 99 K+ +E ++ K + +++ L L++ G D Sbjct: 1519 ASGKVVLIEKLLPKLRKDGHKVLIFSQMVKVLDLLEEFLISMSYPFERIDGNVRGDLRQA 1578 Query: 100 TIQEW--NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 I + + + G G+NL + ++ F W+ + Q R Sbjct: 1579 AIDRFSKENSDRFVFLLCTRAGGLGINLT-AADTVIIFDSDWNPQNDLQAQARC-----H 1632 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN---ALKKET 202 + G K+ V VY LI NT + + + K + +L ALK E Sbjct: 1633 RIGQKKLVKVYRLITSNTYEREMFDKASLKLGLDKAVLQSTTALKAEG 1680 >gi|163644482|gb|AAC17559.2| Temporarily assigned gene name protein 192 [Caenorhabditis elegans] Length = 2963 Score = 85.0 bits (209), Expect = 5e-15, Method: Composition-based stats. Identities = 31/168 (18%), Positives = 57/168 (33%), Gaps = 23/168 (13%) Query: 52 HDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQKAFP---------QGRTL-DKDPC 99 K+ +E ++ K + +++ L L++ G D Sbjct: 1515 ASGKVVLIEKLLPKLRKDGHKVLIFSQMVKVLDLLEEFLISMSYPFERIDGNVRGDLRQA 1574 Query: 100 TIQEW--NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 I + + + G G+NL + ++ F W+ + Q R Sbjct: 1575 AIDRFSKENSDRFVFLLCTRAGGLGINLT-AADTVIIFDSDWNPQNDLQAQARC-----H 1628 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN---ALKKET 202 + G K+ V VY LI NT + + + K + +L ALK E Sbjct: 1629 RIGQKKLVKVYRLITSNTYEREMFDKASLKLGLDKAVLQSTTALKAEG 1676 >gi|50304963|ref|XP_452439.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140] gi|49641572|emb|CAH01290.1| KLLA0C05368p [Kluyveromyces lactis] Length = 1605 Score = 85.0 bits (209), Expect = 5e-15, Method: Composition-based stats. Identities = 25/172 (14%), Positives = 65/172 (37%), Gaps = 24/172 (13%) Query: 41 YYDEEKHWKEVHDEKIKALEVII----EKANAAPIIVAYHFNSDLARLQKAFPQGRTLD- 95 Y + K KE +K++ II + +++ F L + L+ Sbjct: 1417 YTIDYKSLKE--SKKVEMCLDIIKKVTDSNTDEKLVIFSQFTMFFEILGHFIKKNLGLNF 1474 Query: 96 -----------KDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEH 144 + C + + ++ + GL L N ++ +W+ Sbjct: 1475 LRYDGSMSSSQRSACIESFYQDNNYRVMLISMKAGNSGLTLTC-ANHVILADPFWNPFVE 1533 Query: 145 QQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 +Q ++R + +R V+V+ L+ + ++++ +++ K T+ +L ++ Sbjct: 1534 EQAMDRC-----HRISQEREVYVHRLLIKMSVEDRIVELQNKKKTLVNLAMD 1580 >gi|47086607|ref|NP_997881.1| probable global transcription activator SNF2L2 isoform 1 [Danio rerio] gi|38173711|gb|AAH60676.1| SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2 [Danio rerio] Length = 1568 Score = 85.0 bits (209), Expect = 5e-15, Method: Composition-based stats. Identities = 33/160 (20%), Positives = 63/160 (39%), Gaps = 20/160 (12%) Query: 52 HDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAF---------PQGRTLDKDPCT 100 K + L+ I+ K A +++ S + L+ F G T +D Sbjct: 1050 ASGKFELLDRILPKLKATNHRVLLFCQMTSLMTILEDYFGYRNFLYLRLDGTTKSEDRAM 1109 Query: 101 I-QEWNE--GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 + +++NE + + + G GLNLQ + +V F W+ + Q R Sbjct: 1110 LLKKFNEEGSQYFIFLLSTRAGGLGLNLQ-AADTVVIFDSDWNPHQDLQA-----QDRAH 1163 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + G + V V L N+++E +L + K + ++ A Sbjct: 1164 RIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQA 1203 >gi|113673906|ref|NP_001038240.1| probable global transcription activator SNF2L2 isoform 2 [Danio rerio] gi|94732532|emb|CAK04077.1| SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2 [Danio rerio] Length = 1568 Score = 85.0 bits (209), Expect = 5e-15, Method: Composition-based stats. Identities = 33/160 (20%), Positives = 63/160 (39%), Gaps = 20/160 (12%) Query: 52 HDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAF---------PQGRTLDKDPCT 100 K + L+ I+ K A +++ S + L+ F G T +D Sbjct: 1050 ASGKFELLDRILPKLKATNHRVLLFCQMTSLMTILEDYFGYRNFLYLRLDGTTKSEDRAM 1109 Query: 101 I-QEWNE--GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 + +++NE + + + G GLNLQ + +V F W+ + Q R Sbjct: 1110 LLKKFNEEGSQYFIFLLSTRAGGLGLNLQ-AADTVVIFDSDWNPHQDLQA-----QDRAH 1163 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + G + V V L N+++E +L + K + ++ A Sbjct: 1164 RIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQA 1203 >gi|45384078|ref|NP_990470.1| probable global transcription activator SNF2L2 [Gallus gallus] gi|996020|emb|CAA62832.1| BRM protein [Gallus gallus] Length = 1568 Score = 85.0 bits (209), Expect = 5e-15, Method: Composition-based stats. Identities = 30/160 (18%), Positives = 63/160 (39%), Gaps = 20/160 (12%) Query: 52 HDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAF---------PQGRTLDKDPCT 100 K + L+ I+ +A +++ S + ++ F G T +D Sbjct: 1044 ASGKFELLDRILPKLRATNHRVLLFCQMTSLMTIMEDYFAFRNFLYLRLDGTTKSEDRAA 1103 Query: 101 I-QEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 + +++NE + + + G GLNLQ + ++ F W+ + Q R Sbjct: 1104 LLKKFNEPGSQYFIFLLSTRAGGLGLNLQ-AADTVIIFDSDWNPHQDLQA-----QDRAH 1157 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + G + V V L N+++E +L + K + ++ A Sbjct: 1158 RIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQA 1197 >gi|328868264|gb|EGG16642.1| chromo domain-containing protein [Dictyostelium fasciculatum] Length = 2319 Score = 85.0 bits (209), Expect = 5e-15, Method: Composition-based stats. Identities = 24/167 (14%), Positives = 58/167 (34%), Gaps = 20/167 (11%) Query: 52 HDEKIKALEVIIEKA--NAAPIIVAYH----------FNSDLARLQKAFPQGRTLDKDPC 99 K+ ++ ++++ +++ + + + Sbjct: 901 SSSKLVLVDKLLQRLKKEGHRVLIFSQMVESLNILEDYLHYREYSYERLDGSVSSVLRQA 960 Query: 100 TIQEW--NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 +I+ + E + S G G+NL + ++ F W+ + Q R Sbjct: 961 SIERFMDQESDRFVFLLSTRSGGVGINLT-SADTVILFDSDWNPQSDLQAQARC-----H 1014 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIH 204 + G V VY LI +NT ++ + + K + ++LN K ++ Sbjct: 1015 RIGQTSNVKVYRLITRNTYEQYLFEVATKKLLLDHIVLNNAKNNSMK 1061 >gi|224077261|ref|XP_002195547.1| PREDICTED: chromodomain helicase DNA binding protein 6 [Taeniopygia guttata] Length = 2673 Score = 85.0 bits (209), Expect = 5e-15, Method: Composition-based stats. Identities = 25/149 (16%), Positives = 52/149 (34%), Gaps = 18/149 (12%) Query: 66 ANAAPIIVAYHFNSDLARLQKAFPQGR-TLDK---------DPCTIQEWNEGKIP--LLF 113 A +++ L L+ Q R T ++ I + + + Sbjct: 767 AGGHKVLIFSQMVRCLDILEDYLIQRRYTYERIDGRVRGNLRQAAIDRFCKPDSDRFVFL 826 Query: 114 AHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQ 173 + G G+NL + + F W+ + Q R + G +AV VY LI + Sbjct: 827 LCTRAGGLGINLT-AADTCIIFDSDWNPQNDLQAQARC-----HRIGQSKAVKVYRLITR 880 Query: 174 NTIDELVLQRLRTKSTIQDLLLNALKKET 202 N+ + + + K + +L + ++ Sbjct: 881 NSYEREMFDKASLKLGLDKAVLQDINRKG 909 >gi|293347058|ref|XP_001063352.2| PREDICTED: chromodomain helicase DNA binding protein 4 [Rattus norvegicus] Length = 1928 Score = 85.0 bits (209), Expect = 5e-15, Method: Composition-based stats. Identities = 19/136 (13%), Positives = 46/136 (33%), Gaps = 18/136 (13%) Query: 67 NAAPIIVAYHFNSDLARLQ----------KAFPQGRTLDKDPCTIQEWNEG--KIPLLFA 114 +++ L L+ + G T + I +N + Sbjct: 1065 GGHRVLIFSQMTKMLDLLEDFLEHEGYKYERIDGGITGNMRQEAIDRFNAPGAQQFCFLL 1124 Query: 115 HPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQN 174 + G G+NL + ++ + W+ Q +R + G + V +Y + + Sbjct: 1125 STRAGGLGINL-ATADTVIIYDSDWNPHNDIQA-----FSRAHRIGQNKKVMIYRFVTRA 1178 Query: 175 TIDELVLQRLRTKSTI 190 +++E + Q + K + Sbjct: 1179 SVEERITQVAKKKMML 1194 >gi|73997430|ref|XP_867860.1| PREDICTED: similar to chromodomain helicase DNA binding protein 4 isoform 17 [Canis familiaris] Length = 1910 Score = 85.0 bits (209), Expect = 5e-15, Method: Composition-based stats. Identities = 19/136 (13%), Positives = 46/136 (33%), Gaps = 18/136 (13%) Query: 67 NAAPIIVAYHFNSDLARLQ----------KAFPQGRTLDKDPCTIQEWNEG--KIPLLFA 114 +++ L L+ + G T + I +N + Sbjct: 1063 GGHRVLIFSQMTKMLDLLEDFLEHEGYKYERIDGGITGNMRQEAIDRFNAPGAQQFCFLL 1122 Query: 115 HPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQN 174 + G G+NL + ++ + W+ Q +R + G + V +Y + + Sbjct: 1123 STRAGGLGINL-ATADTVIIYDSDWNPHNDIQA-----FSRAHRIGQNKKVMIYRFVTRA 1176 Query: 175 TIDELVLQRLRTKSTI 190 +++E + Q + K + Sbjct: 1177 SVEERITQVAKKKMML 1192 >gi|60360510|dbj|BAD90499.1| mKIAA4075 protein [Mus musculus] Length = 1945 Score = 85.0 bits (209), Expect = 5e-15, Method: Composition-based stats. Identities = 19/136 (13%), Positives = 46/136 (33%), Gaps = 18/136 (13%) Query: 67 NAAPIIVAYHFNSDLARLQ----------KAFPQGRTLDKDPCTIQEWNEG--KIPLLFA 114 +++ L L+ + G T + I +N + Sbjct: 1086 GGHRVLIFSQMTKMLDLLEDFLEHEGYKYERIDGGITGNMRQEAIDRFNAPGAQQFCFLL 1145 Query: 115 HPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQN 174 + G G+NL + ++ + W+ Q +R + G + V +Y + + Sbjct: 1146 STRAGGLGINL-ATADTVIIYDSDWNPHNDIQA-----FSRAHRIGQNKKVMIYRFVTRA 1199 Query: 175 TIDELVLQRLRTKSTI 190 +++E + Q + K + Sbjct: 1200 SVEERITQVAKKKMML 1215 >gi|73997416|ref|XP_867808.1| PREDICTED: similar to chromodomain helicase DNA binding protein 4 isoform 10 [Canis familiaris] Length = 1842 Score = 85.0 bits (209), Expect = 5e-15, Method: Composition-based stats. Identities = 19/136 (13%), Positives = 46/136 (33%), Gaps = 18/136 (13%) Query: 67 NAAPIIVAYHFNSDLARLQ----------KAFPQGRTLDKDPCTIQEWNEG--KIPLLFA 114 +++ L L+ + G T + I +N + Sbjct: 1003 GGHRVLIFSQMTKMLDLLEDFLEHEGYKYERIDGGITGNMRQEAIDRFNAPGAQQFCFLL 1062 Query: 115 HPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQN 174 + G G+NL + ++ + W+ Q +R + G + V +Y + + Sbjct: 1063 STRAGGLGINL-ATADTVIIYDSDWNPHNDIQA-----FSRAHRIGQNKKVMIYRFVTRA 1116 Query: 175 TIDELVLQRLRTKSTI 190 +++E + Q + K + Sbjct: 1117 SVEERITQVAKKKMML 1132 >gi|194389146|dbj|BAG61590.1| unnamed protein product [Homo sapiens] Length = 715 Score = 85.0 bits (209), Expect = 6e-15, Method: Composition-based stats. Identities = 31/160 (19%), Positives = 63/160 (39%), Gaps = 20/160 (12%) Query: 52 HDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAF---------PQGRTLDKDPCT 100 K + L+ I+ +A +++ S + ++ F G T +D Sbjct: 314 ASGKFELLDRILPKLRATNHRVLLFCQMTSLMTIMEDYFAFRNFLYLRLDGTTKSEDRAA 373 Query: 101 I-QEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 + +++NE + + + G GLNLQ + +V F W+ + Q R Sbjct: 374 LLKKFNEPGSQYFIFLLSTRAGGLGLNLQ-AADTVVIFDSDWNPHQDLQA-----QDRAH 427 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + G + V V L N+++E +L + K + ++ A Sbjct: 428 RIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQA 467 >gi|73997436|ref|XP_867881.1| PREDICTED: similar to chromodomain helicase DNA binding protein 4 isoform 20 [Canis familiaris] Length = 1850 Score = 85.0 bits (209), Expect = 6e-15, Method: Composition-based stats. Identities = 19/136 (13%), Positives = 46/136 (33%), Gaps = 18/136 (13%) Query: 67 NAAPIIVAYHFNSDLARLQ----------KAFPQGRTLDKDPCTIQEWNEG--KIPLLFA 114 +++ L L+ + G T + I +N + Sbjct: 1003 GGHRVLIFSQMTKMLDLLEDFLEHEGYKYERIDGGITGNMRQEAIDRFNAPGAQQFCFLL 1062 Query: 115 HPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQN 174 + G G+NL + ++ + W+ Q +R + G + V +Y + + Sbjct: 1063 STRAGGLGINL-ATADTVIIYDSDWNPHNDIQA-----FSRAHRIGQNKKVMIYRFVTRA 1116 Query: 175 TIDELVLQRLRTKSTI 190 +++E + Q + K + Sbjct: 1117 SVEERITQVAKKKMML 1132 >gi|73997408|ref|XP_867779.1| PREDICTED: similar to chromodomain helicase DNA binding protein 4 isoform 6 [Canis familiaris] Length = 1870 Score = 85.0 bits (209), Expect = 6e-15, Method: Composition-based stats. Identities = 19/136 (13%), Positives = 46/136 (33%), Gaps = 18/136 (13%) Query: 67 NAAPIIVAYHFNSDLARLQ----------KAFPQGRTLDKDPCTIQEWNEG--KIPLLFA 114 +++ L L+ + G T + I +N + Sbjct: 1003 GGHRVLIFSQMTKMLDLLEDFLEHEGYKYERIDGGITGNMRQEAIDRFNAPGAQQFCFLL 1062 Query: 115 HPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQN 174 + G G+NL + ++ + W+ Q +R + G + V +Y + + Sbjct: 1063 STRAGGLGINL-ATADTVIIYDSDWNPHNDIQA-----FSRAHRIGQNKKVMIYRFVTRA 1116 Query: 175 TIDELVLQRLRTKSTI 190 +++E + Q + K + Sbjct: 1117 SVEERITQVAKKKMML 1132 >gi|73991998|ref|XP_534421.2| PREDICTED: similar to chromodomain helicase DNA binding protein 6 isoform 1 [Canis familiaris] Length = 2713 Score = 85.0 bits (209), Expect = 6e-15, Method: Composition-based stats. Identities = 25/149 (16%), Positives = 52/149 (34%), Gaps = 18/149 (12%) Query: 66 ANAAPIIVAYHFNSDLARLQKAFPQGR-TLDK---------DPCTIQEWNEGKIP--LLF 113 A +++ L L+ Q R T ++ I + + + Sbjct: 795 AGGHKVLIFSQMVRCLDILEDYLIQRRYTYERIDGRVRGNLRQAAIDRFCKPDSDRFVFL 854 Query: 114 AHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQ 173 + G G+NL + + F W+ + Q R + G +AV VY LI + Sbjct: 855 LCTRAGGLGINLT-AADTCIIFDSDWNPQNDLQAQARC-----HRIGQSKAVKVYRLITR 908 Query: 174 NTIDELVLQRLRTKSTIQDLLLNALKKET 202 N+ + + + K + +L + ++ Sbjct: 909 NSYEREMFDKASLKLGLDKAVLQDINRKG 937 >gi|39204553|ref|NP_666091.1| chromodomain-helicase-DNA-binding protein 4 [Mus musculus] gi|51701319|sp|Q6PDQ2|CHD4_MOUSE RecName: Full=Chromodomain-helicase-DNA-binding protein 4; Short=CHD-4 gi|35193271|gb|AAH58578.1| Chromodomain helicase DNA binding protein 4 [Mus musculus] Length = 1915 Score = 85.0 bits (209), Expect = 6e-15, Method: Composition-based stats. Identities = 19/136 (13%), Positives = 46/136 (33%), Gaps = 18/136 (13%) Query: 67 NAAPIIVAYHFNSDLARLQ----------KAFPQGRTLDKDPCTIQEWNEG--KIPLLFA 114 +++ L L+ + G T + I +N + Sbjct: 1058 GGHRVLIFSQMTKMLDLLEDFLEHEGYKYERIDGGITGNMRQEAIDRFNAPGAQQFCFLL 1117 Query: 115 HPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQN 174 + G G+NL + ++ + W+ Q +R + G + V +Y + + Sbjct: 1118 STRAGGLGINL-ATADTVIIYDSDWNPHNDIQA-----FSRAHRIGQNKKVMIYRFVTRA 1171 Query: 175 TIDELVLQRLRTKSTI 190 +++E + Q + K + Sbjct: 1172 SVEERITQVAKKKMML 1187 >gi|73986636|ref|XP_853739.1| PREDICTED: similar to SWI/SNF-related matrix-associated actin-dependent regulator of chromatin a4 isoform 2 [Canis familiaris] Length = 1673 Score = 85.0 bits (209), Expect = 6e-15, Method: Composition-based stats. Identities = 30/160 (18%), Positives = 62/160 (38%), Gaps = 20/160 (12%) Query: 52 HDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAF---------PQGRTLDKDPCT 100 K + L+ I+ +A +++ S + ++ F G T +D Sbjct: 1078 ASGKFELLDRILPKLRATNHKVLLFCQMTSLMTIMEDYFAYRGFKYLRLDGTTKAEDRGM 1137 Query: 101 I-QEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 + + +NE + + + G GLNLQ + ++ F W+ + Q R Sbjct: 1138 LLKTFNEPGSEYFIFLLSTRAGGLGLNLQ-SADTVIIFDSDWNPHQDLQA-----QDRAH 1191 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + G + V V L N+++E +L + K + ++ A Sbjct: 1192 RIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQA 1231 >gi|66801013|ref|XP_629432.1| myb domain-containing protein [Dictyostelium discoideum AX4] gi|60462823|gb|EAL61023.1| myb domain-containing protein [Dictyostelium discoideum AX4] Length = 1221 Score = 85.0 bits (209), Expect = 6e-15, Method: Composition-based stats. Identities = 21/141 (14%), Positives = 55/141 (39%), Gaps = 18/141 (12%) Query: 68 AAPIIVAYHFNSDLARLQ-----KAFPQGRTLDKDPC-----TIQEWNEG--KIPLLFAH 115 + +++ + L L+ + + R +I+ +N+ + Sbjct: 597 GSRVLIFSQMSRMLDILEDYMLYRGYKYARIDGSTESIVRENSIENYNKPGSDLFAFLLT 656 Query: 116 PASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNT 175 + G G+ L +I++ F W+ + Q R + G + V VY + +N+ Sbjct: 657 TRAGGLGITL-NTADIVILFDSDWNPQMDLQA-----QDRAHRIGQTKPVTVYRFVTENS 710 Query: 176 IDELVLQRLRTKSTIQDLLLN 196 ++E ++++ K + L++ Sbjct: 711 MEEKMVEKAEMKLQLDALVIQ 731 >gi|326681197|ref|XP_003201743.1| PREDICTED: transcription activator BRG1-like, partial [Danio rerio] Length = 771 Score = 85.0 bits (209), Expect = 6e-15, Method: Composition-based stats. Identities = 37/209 (17%), Positives = 74/209 (35%), Gaps = 27/209 (12%) Query: 3 QYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVI 62 Y Q + G + S S+ L + G V + K + L+ I Sbjct: 315 LYRHMQAKGVLLTDGSEKDKKESFSEH---LGFSGGIV----QGLDLYRASGKFEVLDRI 367 Query: 63 IE--KANAAPIIVAYHFNSDLARLQKAF---------PQGRTLDKDPCTI-QEWNEG--K 108 + +A +++ S + ++ F G T +D + + +N+ + Sbjct: 368 LPKLRATNHKVLLFCQMTSLMTIMEDYFAYRNFKYLRLDGTTKAEDRGMLLKTFNDPASQ 427 Query: 109 IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVY 168 + + G GLNLQ + ++ F W+ + Q R + G V V Sbjct: 428 YFIFLLSTRAGGLGLNLQ-SADTVIIFDSDWNPHQDLQA-----QDRAHRIGQLNEVRVL 481 Query: 169 YLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 L N+++E +L + K + ++ A Sbjct: 482 RLCTVNSVEEKILAAAKYKLNVDQKVIQA 510 >gi|312077956|ref|XP_003141528.1| CHromoDomain protein family member [Loa loa] gi|307763307|gb|EFO22541.1| CHromoDomain protein family member [Loa loa] Length = 1696 Score = 85.0 bits (209), Expect = 6e-15, Method: Composition-based stats. Identities = 19/143 (13%), Positives = 49/143 (34%), Gaps = 18/143 (12%) Query: 67 NAAPIIVAYHFNSDLARL---------QKAFPQGRTLDKDPCT-IQEWNEGKIP--LLFA 114 +++ L + + G + I +N + Sbjct: 816 QGHRVLIFSQMTKMLDIMEDFCENEGYKYERIDGSITGQARQDAIDRFNAANAQQFVFLL 875 Query: 115 HPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQN 174 + G G+NL + ++ + W+ Q +R + G ++ V +Y + +N Sbjct: 876 STRAGGLGINL-ATADTVIIYDSDWNPHNDIQA-----FSRAHRIGQQKKVLIYRFVTRN 929 Query: 175 TIDELVLQRLRTKSTIQDLLLNA 197 +++E + + K + L++ A Sbjct: 930 SVEERITSVAKKKMLLTHLVVRA 952 >gi|294463936|gb|ADE77489.1| unknown [Picea sitchensis] Length = 377 Score = 85.0 bits (209), Expect = 6e-15, Method: Composition-based stats. Identities = 22/156 (14%), Positives = 60/156 (38%), Gaps = 20/156 (12%) Query: 55 KIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAFPQGRT----------LDKDPCTIQ 102 K + L+ +++ +A +++ + L L + L I+ Sbjct: 126 KFQLLDRLLKHLRARNHKVLIFSQWTRVLDLLDYCLSESGHDMCRIDGSVKLHDRQRQIK 185 Query: 103 EWNEGK--IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 ++N+ + + + G G+NL + + + W+ + Q ++R + G Sbjct: 186 DFNDPNSNLHIFLLSTRAGGLGINLT-AADTCIIYDSDWNPQMDLQAMDRC-----HRIG 239 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + V VY L ++ + +L+ K ++ +++ Sbjct: 240 QTKPVHVYRLCTSHSAECRMLKVAFDKLKLERVVIE 275 >gi|302667167|ref|XP_003025174.1| hypothetical protein TRV_00656 [Trichophyton verrucosum HKI 0517] gi|291189264|gb|EFE44563.1| hypothetical protein TRV_00656 [Trichophyton verrucosum HKI 0517] Length = 1020 Score = 85.0 bits (209), Expect = 6e-15, Method: Composition-based stats. Identities = 29/138 (21%), Positives = 49/138 (35%), Gaps = 17/138 (12%) Query: 66 ANAAPIIVAYHFNSDLARLQKAF----------PQGRTLDKDPCTIQEWN-EGKIPLLFA 114 AN ++V H L LQ F + + + +N + + + Sbjct: 621 ANGDKVLVFSHNVRLLKMLQMLFNHTSYNVSYLDGSMSYEDRSNIVNAFNSDPRQFVFLI 680 Query: 115 HPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQN 174 + G GLN+ N +V W+ Q R + G R V V+ L++ Sbjct: 681 STKAGGVGLNIT-SANKVVVVDPNWNPAYDLQA-----QDRAYRIGQLRDVEVFRLVSAG 734 Query: 175 TIDELVLQRLRTKSTIQD 192 TI+E+V R K + Sbjct: 735 TIEEIVYARQIYKQQQAN 752 >gi|241999570|ref|XP_002434428.1| conserved hypothetical protein [Ixodes scapularis] gi|215497758|gb|EEC07252.1| conserved hypothetical protein [Ixodes scapularis] Length = 3286 Score = 85.0 bits (209), Expect = 6e-15, Method: Composition-based stats. Identities = 29/156 (18%), Positives = 56/156 (35%), Gaps = 18/156 (11%) Query: 52 HDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKI 109 K+ L+ ++ + ++V L L+ R L + Sbjct: 1232 ASGKLVLLDKLLPRLKDGGHRVLVFSQMVRCLDLLEDYLVHKRYL----EYSDRF----- 1282 Query: 110 PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYY 169 + + G G+NL + +V F W+ + Q R + G +AV VY Sbjct: 1283 -VFLLCTRAGGLGINLT-AADTVVIFDSDWNPQNDLQAQARC-----HRIGQSKAVKVYR 1335 Query: 170 LIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIHV 205 LI +NT + + + K + +L +L + +V Sbjct: 1336 LICRNTYEREMFDKASLKLGLDRAVLQSLNAQKENV 1371 >gi|194208593|ref|XP_001915417.1| PREDICTED: similar to Chromodomain-helicase-DNA-binding protein 9 (ATP-dependent helicase CHD9) (CHD-9) (Chromatin-related mesenchymal modulator) (CReMM) (Chromatin-remodeling factor CHROM1) (Peroxisomal proliferator-activated receptor A-interacting complex 3 [Equus caballus] Length = 2818 Score = 85.0 bits (209), Expect = 6e-15, Method: Composition-based stats. Identities = 25/146 (17%), Positives = 51/146 (34%), Gaps = 18/146 (12%) Query: 65 KANAAPIIVAYHFNSDLARLQKAFPQGRTL----------DKDPCTIQEWNEGKIP--LL 112 KA +++ L L+ R L + I +++ + Sbjct: 1197 KAGGHKVLIFSQMVRCLDILEDYLIHKRYLYERIDGRVRGNLRQAAIDRFSKPDSDRFVF 1256 Query: 113 FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIA 172 + G G+NL + + F W+ + Q R + G +AV VY L+ Sbjct: 1257 LLCTRAGGLGINLT-AADTCIIFDSDWNPQNDLQAQARC-----HRIGQNKAVKVYRLVT 1310 Query: 173 QNTIDELVLQRLRTKSTIQDLLLNAL 198 +N+ + + R K + +L ++ Sbjct: 1311 RNSYEREMFDRASLKLGLDKAVLQSM 1336 >gi|126322837|ref|XP_001362872.1| PREDICTED: similar to SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, isoform 1 [Monodelphis domestica] Length = 1644 Score = 85.0 bits (209), Expect = 6e-15, Method: Composition-based stats. Identities = 30/160 (18%), Positives = 62/160 (38%), Gaps = 20/160 (12%) Query: 52 HDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAF---------PQGRTLDKDPCT 100 K + L+ I+ +A +++ S + ++ F G T +D Sbjct: 1077 ASGKFELLDRILPKLRATNHKVLLFCQMTSLMTIMEDYFAYRGFKYLRLDGTTKAEDRGM 1136 Query: 101 I-QEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 + + +NE + + + G GLNLQ + ++ F W+ + Q R Sbjct: 1137 LLKTFNEPGSEYFIFLLSTRAGGLGLNLQ-SADTVIIFDSDWNPHQDLQA-----QDRAH 1190 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + G + V V L N+++E +L + K + ++ A Sbjct: 1191 RIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQA 1230 >gi|87130801|gb|ABD24032.1| PRIC320 isoform 1 [Homo sapiens] Length = 2881 Score = 85.0 bits (209), Expect = 6e-15, Method: Composition-based stats. Identities = 25/146 (17%), Positives = 51/146 (34%), Gaps = 18/146 (12%) Query: 65 KANAAPIIVAYHFNSDLARLQKAFPQGRTL----------DKDPCTIQEWNEGKIP--LL 112 KA +++ L L+ R L + I +++ + Sbjct: 1195 KAGGHKVLIFSQMVRCLDILEDYLIHKRYLYERIDGRVRGNLRQAAIDRFSKPDSDRFVF 1254 Query: 113 FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIA 172 + G G+NL + + F W+ + Q R + G +AV VY L+ Sbjct: 1255 LLCTRAGGLGINLT-AADTCIIFDSDWNPQNDLQAQARC-----HRIGQNKAVKVYRLVT 1308 Query: 173 QNTIDELVLQRLRTKSTIQDLLLNAL 198 +N+ + + R K + +L ++ Sbjct: 1309 RNSYEREMFDRASLKLGLDKAVLQSM 1334 >gi|49476336|gb|AAT66509.1| KISH2 [Homo sapiens] Length = 2881 Score = 85.0 bits (209), Expect = 6e-15, Method: Composition-based stats. Identities = 25/146 (17%), Positives = 51/146 (34%), Gaps = 18/146 (12%) Query: 65 KANAAPIIVAYHFNSDLARLQKAFPQGRTL----------DKDPCTIQEWNEGKIP--LL 112 KA +++ L L+ R L + I +++ + Sbjct: 1195 KAGGHKVLIFSQMVRCLDILEDYLIHKRYLYERIDGRVRGNLRQAAIDRFSKPDSDRFVF 1254 Query: 113 FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIA 172 + G G+NL + + F W+ + Q R + G +AV VY L+ Sbjct: 1255 LLCTRAGGLGINLT-AADTCIIFDSDWNPQNDLQAQARC-----HRIGQNKAVKVYRLVT 1308 Query: 173 QNTIDELVLQRLRTKSTIQDLLLNAL 198 +N+ + + R K + +L ++ Sbjct: 1309 RNSYEREMFDRASLKLGLDKAVLQSM 1334 >gi|327271626|ref|XP_003220588.1| PREDICTED: chromodomain-helicase-DNA-binding protein 6-like [Anolis carolinensis] Length = 2660 Score = 85.0 bits (209), Expect = 6e-15, Method: Composition-based stats. Identities = 25/149 (16%), Positives = 52/149 (34%), Gaps = 18/149 (12%) Query: 66 ANAAPIIVAYHFNSDLARLQKAFPQGR-TLDK---------DPCTIQEWNEGKIP--LLF 113 A +++ L L+ Q R T ++ I + + + Sbjct: 775 AGGHKVLIFSQMVRCLDILEDYLIQRRYTYERIDGRVRGNLRQAAIDRFCKPDSDRFVFL 834 Query: 114 AHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQ 173 + G G+NL + + F W+ + Q R + G +AV VY LI + Sbjct: 835 LCTRAGGLGINLT-AADTCIIFDSDWNPQNDLQAQARC-----HRIGQSKAVKVYRLITR 888 Query: 174 NTIDELVLQRLRTKSTIQDLLLNALKKET 202 N+ + + + K + +L + ++ Sbjct: 889 NSYEREMFDKASLKLGLDKAVLQDINRKG 917 >gi|259147128|emb|CAY80381.1| Sth1p [Saccharomyces cerevisiae EC1118] Length = 1359 Score = 85.0 bits (209), Expect = 6e-15, Method: Composition-based stats. Identities = 30/147 (20%), Positives = 57/147 (38%), Gaps = 18/147 (12%) Query: 65 KANAAPIIVAYH------FNSDLAR---LQKAFPQGRTLDKDPC-TIQEWNEGKIPLL-- 112 KA+ +++ + D R L+ G T ++ + +N Sbjct: 804 KASGHRVLMFFQMTQVMDIMEDFLRMKDLKYMRLDGSTKTEERTEMLNVFNAPDSDYFCF 863 Query: 113 FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIA 172 + G GLNLQ + ++ F W+ + Q R + G K V + LI Sbjct: 864 LLSTRAGGLGLNLQT-ADTVIIFDTDWNPHQDLQA-----QDRAHRIGQKNEVRILRLIT 917 Query: 173 QNTIDELVLQRLRTKSTIQDLLLNALK 199 ++++E++L+R K I ++ A K Sbjct: 918 TDSVEEVILERAMQKLDIDGKVIQAGK 944 >gi|195031145|ref|XP_001988297.1| GH10643 [Drosophila grimshawi] gi|193904297|gb|EDW03164.1| GH10643 [Drosophila grimshawi] Length = 1931 Score = 85.0 bits (209), Expect = 6e-15, Method: Composition-based stats. Identities = 26/143 (18%), Positives = 53/143 (37%), Gaps = 18/143 (12%) Query: 68 AAPIIVAYHFNSDLA----RLQKAFPQGRTLDK------DPCTIQEWN-EGKIPL-LFAH 115 +++ L LQK + LD + +N EG Sbjct: 878 GHRVLIFSQMVRMLDVLADYLQKRHFSFQRLDGSIKGEMRRQALDHFNAEGSQDFCFLLS 937 Query: 116 PASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNT 175 + G G+NL + ++ F W+ + Q R + G K V +Y L+ + Sbjct: 938 TRAGGLGINL-ATADTVIIFDSDWNPQNDLQAQAR-----AHRIGQKNQVNIYRLVTARS 991 Query: 176 IDELVLQRLRTKSTIQDLLLNAL 198 ++E +++R + K + L++ + Sbjct: 992 VEEQIVERAKQKMVLDHLVIQRM 1014 >gi|291401419|ref|XP_002717032.1| PREDICTED: SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1 [Oryctolagus cuniculus] Length = 1027 Score = 85.0 bits (209), Expect = 6e-15, Method: Composition-based stats. Identities = 30/157 (19%), Positives = 62/157 (39%), Gaps = 19/157 (12%) Query: 51 VHDEKIKALEVIIEKAN--AAPIIVAYHFNSDLARL---------QKAFPQGRT-LDKDP 98 + K + L I+ + +++ F L L + G+T + + Sbjct: 852 LDSGKFRVLGHILSELKQKGDRVVLFSQFTMMLDILEVLLKHHQHRYLRLDGKTQISERI 911 Query: 99 CTIQEWNEG-KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 I E+N I + + G G+NL N+++ + + +Q +R Sbjct: 912 HLIDEFNTDMDIFVFLLSTKAGGLGINLT-SANVVILHDIDCNPYNDKQAEDRC-----H 965 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 + G + V V LI+Q TI+E +L+ + K ++ + Sbjct: 966 RVGQTKEVLVIKLISQGTIEESMLKINQQKLKLEQDM 1002 >gi|95147342|ref|NP_079410.4| chromodomain-helicase-DNA-binding protein 9 [Homo sapiens] Length = 2881 Score = 85.0 bits (209), Expect = 6e-15, Method: Composition-based stats. Identities = 25/146 (17%), Positives = 51/146 (34%), Gaps = 18/146 (12%) Query: 65 KANAAPIIVAYHFNSDLARLQKAFPQGRTL----------DKDPCTIQEWNEGKIP--LL 112 KA +++ L L+ R L + I +++ + Sbjct: 1195 KAGGHKVLIFSQMVRCLDILEDYLIHKRYLYERIDGRVRGNLRQAAIDRFSKPDSDRFVF 1254 Query: 113 FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIA 172 + G G+NL + + F W+ + Q R + G +AV VY L+ Sbjct: 1255 LLCTRAGGLGINLT-AADTCIIFDSDWNPQNDLQAQARC-----HRIGQNKAVKVYRLVT 1308 Query: 173 QNTIDELVLQRLRTKSTIQDLLLNAL 198 +N+ + + R K + +L ++ Sbjct: 1309 RNSYEREMFDRASLKLGLDKAVLQSM 1334 >gi|327276403|ref|XP_003222959.1| PREDICTED: chromodomain-helicase-DNA-binding protein 9-like isoform 2 [Anolis carolinensis] Length = 2876 Score = 85.0 bits (209), Expect = 6e-15, Method: Composition-based stats. Identities = 25/146 (17%), Positives = 51/146 (34%), Gaps = 18/146 (12%) Query: 65 KANAAPIIVAYHFNSDLARLQKAFPQGRTL----------DKDPCTIQEWNEGKIP--LL 112 K+ +++ L L+ R L + I +++ + Sbjct: 1191 KSGGHKVLIFSQMVRCLDILEDYLIHKRYLYERIDGRVRGNLRQAAIDRFSKPDSDRFVF 1250 Query: 113 FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIA 172 + G G+NL + + F W+ + Q R + G +AV VY LI Sbjct: 1251 LLCTRAGGLGINLT-AADTCIIFDSDWNPQNDLQAQARC-----HRIGQNKAVKVYRLIT 1304 Query: 173 QNTIDELVLQRLRTKSTIQDLLLNAL 198 +N+ + + R K + +L ++ Sbjct: 1305 RNSYEREMFDRASLKLGLDKAVLQSM 1330 >gi|294955610|ref|XP_002788591.1| DNA repair helicase, putative [Perkinsus marinus ATCC 50983] gi|239904132|gb|EER20387.1| DNA repair helicase, putative [Perkinsus marinus ATCC 50983] Length = 236 Score = 85.0 bits (209), Expect = 6e-15, Method: Composition-based stats. Identities = 34/167 (20%), Positives = 62/167 (37%), Gaps = 28/167 (16%) Query: 56 IKALEVIIEKANAAPIIVAYHFNSDLARLQKAFP---------------QGRTLDKDPCT 100 + ++ ++ + ++ + F S L ++ Q R+L DP Sbjct: 67 LDTVQSMLNEDATNKFLIFFQFTSLLEITKEEIERRGLGSCGVSNASCGQQRSLLWDPFL 126 Query: 101 IQE--WNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQ 158 +QE +N +L + G G+NLQ N WW+ Q ++R + Sbjct: 127 VQEASFN-----ILLISLRAAGEGINLQ-AANKAFVIDPWWNPAAELQAVQR-----AHR 175 Query: 159 AGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIHV 205 G R V V + NTI+E + R K D + + + H+ Sbjct: 176 LGQTRRVDVVKFVVTNTIEERIRTLQRKKQLAADTTVGGDENASYHL 222 >gi|195020242|ref|XP_001985154.1| GH16907 [Drosophila grimshawi] gi|193898636|gb|EDV97502.1| GH16907 [Drosophila grimshawi] Length = 2013 Score = 85.0 bits (209), Expect = 6e-15, Method: Composition-based stats. Identities = 22/150 (14%), Positives = 54/150 (36%), Gaps = 20/150 (13%) Query: 55 KIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFP----QGRTLDK------DPCTIQ 102 K+ L ++++ + +++ L L+ + +D I Sbjct: 1052 KLVLLSKMLKQLKSQNHRVLIFSQMTKMLDILEDFLEGEQYKYERIDGSITGTLRQEAID 1111 Query: 103 EWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 +N + + + G G+NL + ++ + W+ Q +R + G Sbjct: 1112 RFNAPGAQQFVFLLSTRAGGLGINL-ATADTVIIYDSDWNPHNDIQA-----FSRAHRIG 1165 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 V +Y + +N+++E V Q + K + Sbjct: 1166 QANKVMIYRFVTRNSVEERVTQVAKRKMML 1195 >gi|114662479|ref|XP_001165654.1| PREDICTED: chromodomain helicase DNA binding protein 9 isoform 2 [Pan troglodytes] Length = 2883 Score = 85.0 bits (209), Expect = 6e-15, Method: Composition-based stats. Identities = 25/146 (17%), Positives = 51/146 (34%), Gaps = 18/146 (12%) Query: 65 KANAAPIIVAYHFNSDLARLQKAFPQGRTL----------DKDPCTIQEWNEGKIP--LL 112 KA +++ L L+ R L + I +++ + Sbjct: 1195 KAGGHKVLIFSQMVRCLDILEDYLIHKRYLYERIDGRVRGNLRQAAIDRFSKPDSDRFVF 1254 Query: 113 FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIA 172 + G G+NL + + F W+ + Q R + G +AV VY L+ Sbjct: 1255 LLCTRAGGLGINLT-AADTCIIFDSDWNPQNDLQAQARC-----HRIGQNKAVKVYRLVT 1308 Query: 173 QNTIDELVLQRLRTKSTIQDLLLNAL 198 +N+ + + R K + +L ++ Sbjct: 1309 RNSYEREMFDRASLKLGLDKAVLQSM 1334 >gi|114662481|ref|XP_510966.2| PREDICTED: chromodomain helicase DNA binding protein 9 isoform 5 [Pan troglodytes] gi|114662483|ref|XP_001165616.1| PREDICTED: chromodomain helicase DNA binding protein 9 isoform 1 [Pan troglodytes] Length = 2882 Score = 85.0 bits (209), Expect = 6e-15, Method: Composition-based stats. Identities = 25/146 (17%), Positives = 51/146 (34%), Gaps = 18/146 (12%) Query: 65 KANAAPIIVAYHFNSDLARLQKAFPQGRTL----------DKDPCTIQEWNEGKIP--LL 112 KA +++ L L+ R L + I +++ + Sbjct: 1195 KAGGHKVLIFSQMVRCLDILEDYLIHKRYLYERIDGRVRGNLRQAAIDRFSKPDSDRFVF 1254 Query: 113 FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIA 172 + G G+NL + + F W+ + Q R + G +AV VY L+ Sbjct: 1255 LLCTRAGGLGINLT-AADTCIIFDSDWNPQNDLQAQARC-----HRIGQNKAVKVYRLVT 1308 Query: 173 QNTIDELVLQRLRTKSTIQDLLLNAL 198 +N+ + + R K + +L ++ Sbjct: 1309 RNSYEREMFDRASLKLGLDKAVLQSM 1334 >gi|861466|gb|AAB33905.1| DNA helicase homolog [Invertebrate iridescent virus 6] Length = 606 Score = 85.0 bits (209), Expect = 6e-15, Method: Composition-based stats. Identities = 32/149 (21%), Positives = 56/149 (37%), Gaps = 17/149 (11%) Query: 63 IEKANAAPIIVAYHFNSDLARLQKAFPQ-----------GRTLDKDPCTIQEWNEGKIPL 111 E + IIV F S L L +A + G T ++ Q N+ Sbjct: 443 FEIMHPTKIIVFSMFTSCLDLLSEAIKEDYPNFKFVQVDGDTKNRSELFDQFKNDINTQG 502 Query: 112 LFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLI 171 LF GLNL + + WW H Q R+ + G + V+V+ +I Sbjct: 503 LFLTYKVGSEGLNLTEATHCIC-IEPWWTNAVHNQAKARLW-----RTGQTKQVYVHNVI 556 Query: 172 AQNTIDELVLQRLRTKSTIQDLLLNALKK 200 + +I+E +++ + K + L ++ Sbjct: 557 IEGSIEEKIVEICKGKDDMAASYLEGKER 585 >gi|68164076|gb|AAY87153.1| ciprofibrate bound protein p240 isoform PRIC320-2 [Homo sapiens] Length = 1995 Score = 85.0 bits (209), Expect = 6e-15, Method: Composition-based stats. Identities = 25/146 (17%), Positives = 51/146 (34%), Gaps = 18/146 (12%) Query: 65 KANAAPIIVAYHFNSDLARLQKAFPQGRTL----------DKDPCTIQEWNEGKIP--LL 112 KA +++ L L+ R L + I +++ + Sbjct: 309 KAGGHKVLIFSQMVRCLDILEDYLIHKRYLYERIDGRVRGNLRQAAIDRFSKPDSDRFVF 368 Query: 113 FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIA 172 + G G+NL + + F W+ + Q R + G +AV VY L+ Sbjct: 369 LLCTRAGGLGINLT-AADTCIIFDSDWNPQNDLQAQARC-----HRIGQNKAVKVYRLVT 422 Query: 173 QNTIDELVLQRLRTKSTIQDLLLNAL 198 +N+ + + R K + +L ++ Sbjct: 423 RNSYEREMFDRASLKLGLDKAVLQSM 448 >gi|302502981|ref|XP_003013451.1| hypothetical protein ARB_00269 [Arthroderma benhamiae CBS 112371] gi|291177015|gb|EFE32811.1| hypothetical protein ARB_00269 [Arthroderma benhamiae CBS 112371] Length = 1019 Score = 85.0 bits (209), Expect = 6e-15, Method: Composition-based stats. Identities = 29/138 (21%), Positives = 49/138 (35%), Gaps = 17/138 (12%) Query: 66 ANAAPIIVAYHFNSDLARLQKAF----------PQGRTLDKDPCTIQEWN-EGKIPLLFA 114 AN ++V H L LQ F + + + +N + + + Sbjct: 621 ANGDKVLVFSHNVRLLKMLQMLFNHTSYNVSYLDGSMSYEDRSNIVNAFNSDPRQFVFLI 680 Query: 115 HPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQN 174 + G GLN+ N +V W+ Q R + G R V V+ L++ Sbjct: 681 STKAGGVGLNIT-SANKVVVVDPNWNPAYDLQA-----QDRAYRIGQLRDVEVFRLVSAG 734 Query: 175 TIDELVLQRLRTKSTIQD 192 TI+E+V R K + Sbjct: 735 TIEEIVYARQIYKQQQAN 752 >gi|289614685|emb|CBI58522.1| unnamed protein product [Sordaria macrospora] Length = 1159 Score = 85.0 bits (209), Expect = 6e-15, Method: Composition-based stats. Identities = 32/159 (20%), Positives = 52/159 (32%), Gaps = 21/159 (13%) Query: 51 VHDEKIKALEV----IIEKANAAPIIVAYHFNSDLARLQKAF---------PQGRTLDKD 97 KI AL + ++ +V F S L + A G K Sbjct: 984 DSSAKIVALISHLRALRQEHPKMKSLVISQFTSFLTLISSALARHKIAFLRLDGSMSQKA 1043 Query: 98 PCTI--QEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTR 155 + + K +L + G GLNL + WW Q I+R+ Sbjct: 1044 RAAVLTEFQASNKFCVLLLSLKAGGVGLNLTN-AKRVYMMDPWWSFAVEAQAIDRV---- 1098 Query: 156 QRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 + G + V VY I + +++ +L+ K I L Sbjct: 1099 -HRMGQEDEVRVYRFIVKQSVEMRMLRVQERKKFIATSL 1136 >gi|123421883|ref|XP_001306074.1| F/Y-rich N-terminus family protein [Trichomonas vaginalis G3] gi|121887628|gb|EAX93144.1| F/Y-rich N-terminus family protein [Trichomonas vaginalis G3] Length = 1483 Score = 85.0 bits (209), Expect = 6e-15, Method: Composition-based stats. Identities = 23/148 (15%), Positives = 49/148 (33%), Gaps = 18/148 (12%) Query: 67 NAAPIIVAYHFNSDLARLQKAF---------PQGRTLDKDPC-TIQEWNE--GKIPLLFA 114 N +++ L +Q G + I ++NE + + Sbjct: 550 NGHRVLLFSQMTKMLDIIQDYLVYKGYKFERLDGSVKSEIRQGMIDKFNEEGSEDFIFLL 609 Query: 115 HPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQN 174 + G G+NL + ++ + W+ + Q R + G K+ V VY L+ Sbjct: 610 CTKAGGLGINLT-SADTVIIYDSDWNPQNDLQATAR-----AHRIGQKKNVKVYRLLTAK 663 Query: 175 TIDELVLQRLRTKSTIQDLLLNALKKET 202 + + + K + +L K + Sbjct: 664 SYERKMFDTAAIKLGLDQAVLENTKDKP 691 >gi|149020472|gb|EDL78277.1| SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, isoform CRA_a [Rattus norvegicus] Length = 1647 Score = 85.0 bits (209), Expect = 6e-15, Method: Composition-based stats. Identities = 30/160 (18%), Positives = 62/160 (38%), Gaps = 20/160 (12%) Query: 52 HDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAF---------PQGRTLDKDPCT 100 K + L+ I+ +A +++ S + ++ F G T +D Sbjct: 1078 ASGKFELLDRILPKLRATNHKVLLFCQMTSLMTIMEDYFAYRGFKYLRLDGTTKAEDRGM 1137 Query: 101 I-QEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 + + +NE + + + G GLNLQ + ++ F W+ + Q R Sbjct: 1138 LLKTFNEPGSEYFIFLLSTRAGGLGLNLQ-SADTVIIFDSDWNPHQDLQA-----QDRAH 1191 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + G + V V L N+++E +L + K + ++ A Sbjct: 1192 RIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQA 1231 >gi|73997410|ref|XP_867787.1| PREDICTED: similar to chromodomain helicase DNA binding protein 4 isoform 7 [Canis familiaris] Length = 1766 Score = 85.0 bits (209), Expect = 6e-15, Method: Composition-based stats. Identities = 19/136 (13%), Positives = 46/136 (33%), Gaps = 18/136 (13%) Query: 67 NAAPIIVAYHFNSDLARLQ----------KAFPQGRTLDKDPCTIQEWNEG--KIPLLFA 114 +++ L L+ + G T + I +N + Sbjct: 938 GGHRVLIFSQMTKMLDLLEDFLEHEGYKYERIDGGITGNMRQEAIDRFNAPGAQQFCFLL 997 Query: 115 HPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQN 174 + G G+NL + ++ + W+ Q +R + G + V +Y + + Sbjct: 998 STRAGGLGINL-ATADTVIIYDSDWNPHNDIQA-----FSRAHRIGQNKKVMIYRFVTRA 1051 Query: 175 TIDELVLQRLRTKSTI 190 +++E + Q + K + Sbjct: 1052 SVEERITQVAKKKMML 1067 >gi|297684878|ref|XP_002820041.1| PREDICTED: hypothetical protein LOC100434553 [Pongo abelii] Length = 1549 Score = 85.0 bits (209), Expect = 6e-15, Method: Composition-based stats. Identities = 33/152 (21%), Positives = 61/152 (40%), Gaps = 19/152 (12%) Query: 53 DEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQK---------AFPQGRTLDKDP-CT 100 K+K L+ ++ + N +++ L LQ+ G T ++ Sbjct: 507 SGKMKVLQQLLNHCRKNRDKVLLFSFSTKLLDVLQQYCMASGLDYRRLDGSTKSEERLKI 566 Query: 101 IQEWNE-GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQA 159 ++E+N + + + G GLN G N++V F W+ Q I+R + Sbjct: 567 VKEFNSTQDVNICLVSTMAGGLGLNF-VGANVVVLFDPTWNPANDLQAIDR-----AYRI 620 Query: 160 GFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQ 191 G R V V LI+ T++E++ R K + Sbjct: 621 GQCRDVKVLRLISLGTVEEIMYLRQIYKQQLH 652 >gi|189233881|ref|XP_970343.2| PREDICTED: similar to Chromodomain-helicase-DNA-binding protein [Tribolium castaneum] gi|270014822|gb|EFA11270.1| hypothetical protein TcasGA2_TC010805 [Tribolium castaneum] Length = 1697 Score = 85.0 bits (209), Expect = 6e-15, Method: Composition-based stats. Identities = 38/222 (17%), Positives = 79/222 (35%), Gaps = 38/222 (17%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYD----EEKHWKEVH----- 52 K Y+ ++ ++G N + KC N A+ E + +E H Sbjct: 678 KNYNALRKG----VKGSTNTFLNIVIELKKC---CNHALLTKPTEYESNNSQEDHLQLLL 730 Query: 53 --DEKIKALEVIIEKA--NAAPIIVAYHFNSDLARL-----QKAFPQGRTLDK-----DP 98 K+ L+ ++ + +++ L L + FP R Sbjct: 731 RGSGKLVLLDKLLIRLRETGHRVLIFSQMVRMLDILGEYLQLRHFPFQRLDGGIKGELRK 790 Query: 99 CTIQEWN-EGKIPL-LFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 + +N EG + G G+NL + ++ F W+ + Q R Sbjct: 791 QALDHFNAEGSQDFCFLLSTRAGGLGINL-ATADTVIIFDSDWNPQNDLQAQAR-----A 844 Query: 157 RQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNAL 198 + G K V +Y L+ +++E +++R + K + L++ + Sbjct: 845 HRIGQKNQVNIYRLVTARSVEEEIVERAKQKMVLDHLVIQRM 886 >gi|116179964|ref|XP_001219831.1| hypothetical protein CHGG_00610 [Chaetomium globosum CBS 148.51] gi|88184907|gb|EAQ92375.1| hypothetical protein CHGG_00610 [Chaetomium globosum CBS 148.51] Length = 1793 Score = 85.0 bits (209), Expect = 6e-15, Method: Composition-based stats. Identities = 35/224 (15%), Positives = 79/224 (35%), Gaps = 37/224 (16%) Query: 6 KFQRELYCDLQGENIEAFNSASKTVKCLQL----ANGAVYY---DEEKHWKEVH------ 52 + R ++ ++A S + +QL + +Y ++ E+ Sbjct: 1098 ELIRSVFVQ---GKMKAHERGSLSNILMQLRKCLCHPFIYSQAIEDRTTSAELTRRNLVE 1154 Query: 53 -DEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQKAFPQGRTLDKD----------PC 99 K+ LE+++ K +++ F L L+ + Sbjct: 1155 ASSKLMLLEIMLPKLKERGHRVLLFSQFLDQLTVLEDFLAGLGLRHERLDGSQSSMEKQS 1214 Query: 100 TIQEWNEGK--IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 I +N I ++ + G G+NL + ++ W+ + Q + R Sbjct: 1215 KIDAFNAPDSDIFVMLLSTRAGGVGINL-ATADTVIILDPDWNPHQDIQALSR-----AH 1268 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 + G ++ V + L+ ++ +E +LQ R K + LL+ + E Sbjct: 1269 RIGQRKKVLCFQLMTVDSAEEKILQIGRKKLALDHLLIETMDNE 1312 >gi|320039914|gb|EFW21848.1| SNF2 family helicase/ATPase [Coccidioides posadasii str. Silveira] Length = 1048 Score = 85.0 bits (209), Expect = 6e-15, Method: Composition-based stats. Identities = 27/158 (17%), Positives = 57/158 (36%), Gaps = 18/158 (11%) Query: 52 HDEKIKALEVIIEKANAA-PIIVAYHFNSDLARLQ----------KAFPQGRTLDKDPCT 100 KI+ L I+++ IV F S L +++ + G + Sbjct: 797 SSTKIRHLLRILKREAGEFKFIVFSVFTSMLDKIEPFLESAGIGYARYDGGMRNGLREAS 856 Query: 101 IQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQA 159 +++ +L + GLNL + +V +W+ +Q I+R+ + Sbjct: 857 LEKLRHSSSTRVLLCSLRAGSLGLNLT-AASRVVILEPFWNPFVEEQAIDRV-----HRL 910 Query: 160 GFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 V VY + ++T++E +L K + + Sbjct: 911 NQTVDVKVYKMTIKDTVEERILDLQERKRELASATIEG 948 >gi|303311897|ref|XP_003065960.1| SNF2 family N-terminal domain containing protein [Coccidioides posadasii C735 delta SOWgp] gi|240105622|gb|EER23815.1| SNF2 family N-terminal domain containing protein [Coccidioides posadasii C735 delta SOWgp] Length = 1048 Score = 85.0 bits (209), Expect = 6e-15, Method: Composition-based stats. Identities = 27/158 (17%), Positives = 57/158 (36%), Gaps = 18/158 (11%) Query: 52 HDEKIKALEVIIEKANAA-PIIVAYHFNSDLARLQ----------KAFPQGRTLDKDPCT 100 KI+ L I+++ IV F S L +++ + G + Sbjct: 797 SSTKIRHLLRILKREAGEFKFIVFSVFTSMLDKIEPFLESAGIGYARYDGGMRNGLREAS 856 Query: 101 IQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQA 159 +++ +L + GLNL + +V +W+ +Q I+R+ + Sbjct: 857 LEKLRHSSSTRVLLCSLRAGSLGLNLT-AASRVVILEPFWNPFVEEQAIDRV-----HRL 910 Query: 160 GFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 V VY + ++T++E +L K + + Sbjct: 911 NQTVDVKVYKMTIKDTVEERILDLQERKRELASATIEG 948 >gi|162455821|ref|YP_001618188.1| SNF2 family helicase [Sorangium cellulosum 'So ce 56'] gi|161166403|emb|CAN97708.1| helicase, Snf2 family [Sorangium cellulosum 'So ce 56'] Length = 944 Score = 85.0 bits (209), Expect = 6e-15, Method: Composition-based stats. Identities = 39/186 (20%), Positives = 69/186 (37%), Gaps = 24/186 (12%) Query: 29 TVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAP---IIVAYHFNSDLARLQ 85 +K Q N D + ++ K+ LE +I + A P +IV + L Sbjct: 503 LMKARQACNALELCDPRR--RKKASPKLDELEALIAEVTAQPRNKVIVFSEWVGMLELAS 560 Query: 86 KAFPQGRT----------LDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFF 135 + + R D+ P + + + + + G GLNLQ + +V Sbjct: 561 ERLDRLRVGHAMLHGDVPTDRRPALLDRFRDDPAVRVLLSTDAGGVGLNLQ-AASYVVHL 619 Query: 136 SLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 L W+ Q R + G R+V V YL A+ I+ + L K + L+ Sbjct: 620 DLPWNPARLDQRTAR-----AHRLGQGRSVSVTYLCAEEGIERGIEGILSEKRKV---LV 671 Query: 196 NALKKE 201 +L+ + Sbjct: 672 ASLRAD 677 >gi|295670543|ref|XP_002795819.1| DNA repair protein rad5 [Paracoccidioides brasiliensis Pb01] gi|226284904|gb|EEH40470.1| DNA repair protein rad5 [Paracoccidioides brasiliensis Pb01] Length = 1187 Score = 85.0 bits (209), Expect = 6e-15, Method: Composition-based stats. Identities = 33/182 (18%), Positives = 52/182 (28%), Gaps = 45/182 (24%) Query: 52 HDEKIKALEVIIEKA-NAAPIIVAYHFNSDLARLQKAFPQGRT----------------- 93 KI+AL + K + ++V F S L + Sbjct: 986 TSAKIQALISHLTKLPSNDKVVVFSQFTSFLDLIGHQLTCAGISHLRFDGSISQTSRAAV 1045 Query: 94 ------------------LDKDPCTIQEWNEGKIP---LLFAHPASCGHGLNLQYGGNIL 132 + N K +L + G GLNL N + Sbjct: 1046 LAKFCSVAVADDKDDDDEDKRQSKLPSSNNHAKESPPNVLLISLRAGGVGLNLTT-ANHV 1104 Query: 133 VFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQD 192 WW Q I+R+ + G R V V I +++I+ +L+ K I Sbjct: 1105 FMMDPWWSFATEAQAIDRV-----HRMGQLRDVTVTRFIVKDSIEGRILKIQERKMMIAG 1159 Query: 193 LL 194 L Sbjct: 1160 SL 1161 >gi|194208967|ref|XP_001497269.2| PREDICTED: similar to SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1 isoform 2 [Equus caballus] Length = 1029 Score = 85.0 bits (209), Expect = 6e-15, Method: Composition-based stats. Identities = 30/157 (19%), Positives = 62/157 (39%), Gaps = 19/157 (12%) Query: 51 VHDEKIKALEVIIEKAN--AAPIIVAYHFNSDLARL---------QKAFPQGRT-LDKDP 98 + K + L I+ + +++ F L L + G+T + + Sbjct: 854 LDSGKFRVLGRILSELKQKGDRVVLFSQFTMMLDILEVLLKHHQHRYLRLDGKTQISERI 913 Query: 99 CTIQEWNEG-KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 I E+N I + + G G+NL N+++ + + +Q +R Sbjct: 914 HLIDEFNTDMDIFVFLLSTKAGGLGINLT-SANVVILHDIDCNPYNDKQAEDRC-----H 967 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 + G + V V LI+Q TI+E +L+ + K ++ + Sbjct: 968 RVGQTKEVLVIKLISQGTIEESMLKINQQKLKLEQDM 1004 >gi|156393888|ref|XP_001636559.1| predicted protein [Nematostella vectensis] gi|156223663|gb|EDO44496.1| predicted protein [Nematostella vectensis] Length = 814 Score = 85.0 bits (209), Expect = 6e-15, Method: Composition-based stats. Identities = 34/170 (20%), Positives = 60/170 (35%), Gaps = 32/170 (18%) Query: 53 DEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQKAFPQGRTLDKDP------------ 98 K+ L I+ A ++V L +++A G Sbjct: 550 SGKLVLLLEILADAEAVEEKVLVFSQSLVSLDLIERALGGGEVGGDRENWCKGCDYFRMD 609 Query: 99 -----CTIQEW----NEGKIP---LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 Q W N+ L + G G+NL N ++ F W+ Q Sbjct: 610 GSTSVQLRQRWADIFNDPDNKTARLFLISTKAGGLGINL-VAANRVIVFDASWNPSHDVQ 668 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 I R+ + G +AV+VY ++Q T++E V R K +I + +++ Sbjct: 669 SIFRV-----YRFGQTKAVYVYRFLSQGTMEERVYDRQVAKLSISERVVD 713 >gi|154488700|ref|ZP_02029549.1| hypothetical protein BIFADO_02007 [Bifidobacterium adolescentis L2-32] gi|154082837|gb|EDN81882.1| hypothetical protein BIFADO_02007 [Bifidobacterium adolescentis L2-32] Length = 721 Score = 85.0 bits (209), Expect = 6e-15, Method: Composition-based stats. Identities = 34/153 (22%), Positives = 59/153 (38%), Gaps = 17/153 (11%) Query: 52 HDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQKAF--------PQGRTLDKDPCTI 101 K K L IIE+A ++V + + ++ T + I Sbjct: 516 DSGKAKRLLEIIEEAKSEGRKVLVFSFYLDTIRKIADMLGSQCTEPINGSITPTRRQEII 575 Query: 102 QEWNEGKI-PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 ++++ +L A + G GLN+Q ++++ Q I R + G Sbjct: 576 DDFDKAPAGQVLVAQIVAGGTGLNIQ-SASVVIICEPQLKPSIENQAISR-----AYRMG 629 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDL 193 R V VY L+A+NTIDE + L K + + Sbjct: 630 QARNVLVYRLLAENTIDEKITDILARKQEVFNA 662 >gi|148684275|gb|EDL16222.1| stretch responsive protein 278, isoform CRA_a [Mus musculus] Length = 708 Score = 85.0 bits (209), Expect = 6e-15, Method: Composition-based stats. Identities = 30/152 (19%), Positives = 60/152 (39%), Gaps = 19/152 (12%) Query: 53 DEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQK---------AFPQGRTLDKDP-CT 100 K+K L+ ++ + +++ L LQ+ G T ++ Sbjct: 514 SGKMKVLQQLLNHFRKQRDKVLLFSFSTKLLDVLQQYCMASGLDYRRLDGSTKSEERLKI 573 Query: 101 IQEWNEG-KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQA 159 ++E+N + + + G GLN G N+++ F W+ Q ++R + Sbjct: 574 VKEFNSSQDVNICLVSTMAGGLGLNF-VGANVVILFDPTWNPANDLQAVDR-----AYRI 627 Query: 160 GFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQ 191 G R V V LI+ T++E++ R K + Sbjct: 628 GQCRDVKVLRLISLGTVEEIMYLRQVYKQQLH 659 >gi|332029993|gb|EGI69818.1| Chromodomain-helicase-DNA-binding protein Mi-2-like protein [Acromyrmex echinatior] Length = 1852 Score = 85.0 bits (209), Expect = 6e-15, Method: Composition-based stats. Identities = 18/126 (14%), Positives = 45/126 (35%), Gaps = 12/126 (9%) Query: 65 KANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLN 124 + + +++ L L+ + Q++ + + G G+N Sbjct: 956 RDDGHRVLIFSQMTKMLDILEDYLEGEGYKYERIDGAQQF------VFLLSTRAGGLGIN 1009 Query: 125 LQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRL 184 L + ++ + W+ Q +R + G V +Y + +N+++E V Q Sbjct: 1010 L-ATADTVIIYDSDWNPHNDIQA-----FSRAHRIGQANKVMIYRFVTRNSVEERVTQVA 1063 Query: 185 RTKSTI 190 + K + Sbjct: 1064 KRKMML 1069 >gi|327288760|ref|XP_003229093.1| PREDICTED: chromodomain-helicase-DNA-binding protein 3-like [Anolis carolinensis] Length = 2059 Score = 85.0 bits (209), Expect = 6e-15, Method: Composition-based stats. Identities = 24/160 (15%), Positives = 52/160 (32%), Gaps = 20/160 (12%) Query: 45 EKHWKEVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQ----------KAFPQGR 92 E K+ L+ ++ K +++ L L+ + G Sbjct: 1109 EGGALIKSSGKLMLLQKMLRKLKEQGHRVLIFSQMTKMLDLLEDFLDYEGYKYERIDGGI 1168 Query: 93 TLDKDPCTIQEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 T I +N + + G G+NL + ++ F W+ Q Sbjct: 1169 TGALRQEAIDRFNAPGAQQFCFLLSTRAGGLGINL-ATADTVIIFDSDWNPHNDIQA--- 1224 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 +R + G V +Y + + +++E + Q + K + Sbjct: 1225 --FSRAHRIGQANKVMIYRFVTRASVEERITQVAKRKMML 1262 >gi|215273951|sp|Q3L8U1|CHD9_HUMAN RecName: Full=Chromodomain-helicase-DNA-binding protein 9; Short=CHD-9; AltName: Full=ATP-dependent helicase CHD9; AltName: Full=Chromatin-related mesenchymal modulator; Short=CReMM; AltName: Full=Chromatin-remodeling factor CHROM1; AltName: Full=Kismet homolog 2; AltName: Full=PPAR-alpha-interacting complex protein 320 kDa; AltName: Full=Peroxisomal proliferator-activated receptor A-interacting complex 320 kDa protein gi|187954623|gb|AAI40816.1| CHD9 protein [Homo sapiens] Length = 2897 Score = 85.0 bits (209), Expect = 6e-15, Method: Composition-based stats. Identities = 25/146 (17%), Positives = 51/146 (34%), Gaps = 18/146 (12%) Query: 65 KANAAPIIVAYHFNSDLARLQKAFPQGRTL----------DKDPCTIQEWNEGKIP--LL 112 KA +++ L L+ R L + I +++ + Sbjct: 1195 KAGGHKVLIFSQMVRCLDILEDYLIHKRYLYERIDGRVRGNLRQAAIDRFSKPDSDRFVF 1254 Query: 113 FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIA 172 + G G+NL + + F W+ + Q R + G +AV VY L+ Sbjct: 1255 LLCTRAGGLGINLT-AADTCIIFDSDWNPQNDLQAQARC-----HRIGQNKAVKVYRLVT 1308 Query: 173 QNTIDELVLQRLRTKSTIQDLLLNAL 198 +N+ + + R K + +L ++ Sbjct: 1309 RNSYEREMFDRASLKLGLDKAVLQSM 1334 >gi|148693261|gb|EDL25208.1| SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, isoform CRA_a [Mus musculus] Length = 1647 Score = 85.0 bits (209), Expect = 6e-15, Method: Composition-based stats. Identities = 30/160 (18%), Positives = 62/160 (38%), Gaps = 20/160 (12%) Query: 52 HDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAF---------PQGRTLDKDPCT 100 K + L+ I+ +A +++ S + ++ F G T +D Sbjct: 1078 ASGKFELLDRILPKLRATNHKVLLFCQMTSLMTIMEDYFAYRGFKYLRLDGTTKAEDRGM 1137 Query: 101 I-QEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 + + +NE + + + G GLNLQ + ++ F W+ + Q R Sbjct: 1138 LLKTFNEPGSEYFIFLLSTRAGGLGLNLQ-SADTVIIFDSDWNPHQDLQA-----QDRAH 1191 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + G + V V L N+++E +L + K + ++ A Sbjct: 1192 RIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQA 1231 >gi|119609183|gb|EAW88777.1| chromodomain helicase DNA binding protein 4, isoform CRA_a [Homo sapiens] Length = 1911 Score = 85.0 bits (209), Expect = 6e-15, Method: Composition-based stats. Identities = 19/136 (13%), Positives = 46/136 (33%), Gaps = 18/136 (13%) Query: 67 NAAPIIVAYHFNSDLARLQ----------KAFPQGRTLDKDPCTIQEWNEG--KIPLLFA 114 +++ L L+ + G T + I +N + Sbjct: 1065 GGHRVLIFSQMTKMLDLLEDFLEHEGYKYERIDGGITGNMRQEAIDRFNAPGAQQFCFLL 1124 Query: 115 HPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQN 174 + G G+NL + ++ + W+ Q +R + G + V +Y + + Sbjct: 1125 STRAGGLGINL-ATADTVIIYDSDWNPHNDIQA-----FSRAHRIGQNKKVMIYRFVTRA 1178 Query: 175 TIDELVLQRLRTKSTI 190 +++E + Q + K + Sbjct: 1179 SVEERITQVAKKKMML 1194 >gi|119609185|gb|EAW88779.1| chromodomain helicase DNA binding protein 4, isoform CRA_c [Homo sapiens] Length = 1908 Score = 85.0 bits (209), Expect = 6e-15, Method: Composition-based stats. Identities = 19/136 (13%), Positives = 46/136 (33%), Gaps = 18/136 (13%) Query: 67 NAAPIIVAYHFNSDLARLQ----------KAFPQGRTLDKDPCTIQEWNEG--KIPLLFA 114 +++ L L+ + G T + I +N + Sbjct: 1062 GGHRVLIFSQMTKMLDLLEDFLEHEGYKYERIDGGITGNMRQEAIDRFNAPGAQQFCFLL 1121 Query: 115 HPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQN 174 + G G+NL + ++ + W+ Q +R + G + V +Y + + Sbjct: 1122 STRAGGLGINL-ATADTVIIYDSDWNPHNDIQA-----FSRAHRIGQNKKVMIYRFVTRA 1175 Query: 175 TIDELVLQRLRTKSTI 190 +++E + Q + K + Sbjct: 1176 SVEERITQVAKKKMML 1191 >gi|73997438|ref|XP_867887.1| PREDICTED: similar to chromodomain helicase DNA binding protein 4 isoform 21 [Canis familiaris] Length = 1889 Score = 85.0 bits (209), Expect = 6e-15, Method: Composition-based stats. Identities = 19/136 (13%), Positives = 46/136 (33%), Gaps = 18/136 (13%) Query: 67 NAAPIIVAYHFNSDLARLQ----------KAFPQGRTLDKDPCTIQEWNEG--KIPLLFA 114 +++ L L+ + G T + I +N + Sbjct: 1042 GGHRVLIFSQMTKMLDLLEDFLEHEGYKYERIDGGITGNMRQEAIDRFNAPGAQQFCFLL 1101 Query: 115 HPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQN 174 + G G+NL + ++ + W+ Q +R + G + V +Y + + Sbjct: 1102 STRAGGLGINL-ATADTVIIYDSDWNPHNDIQA-----FSRAHRIGQNKKVMIYRFVTRA 1155 Query: 175 TIDELVLQRLRTKSTI 190 +++E + Q + K + Sbjct: 1156 SVEERITQVAKKKMML 1171 >gi|73997434|ref|XP_867875.1| PREDICTED: similar to chromodomain helicase DNA binding protein 4 isoform 19 [Canis familiaris] Length = 1887 Score = 85.0 bits (209), Expect = 6e-15, Method: Composition-based stats. Identities = 19/136 (13%), Positives = 46/136 (33%), Gaps = 18/136 (13%) Query: 67 NAAPIIVAYHFNSDLARLQ----------KAFPQGRTLDKDPCTIQEWNEG--KIPLLFA 114 +++ L L+ + G T + I +N + Sbjct: 1040 GGHRVLIFSQMTKMLDLLEDFLEHEGYKYERIDGGITGNMRQEAIDRFNAPGAQQFCFLL 1099 Query: 115 HPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQN 174 + G G+NL + ++ + W+ Q +R + G + V +Y + + Sbjct: 1100 STRAGGLGINL-ATADTVIIYDSDWNPHNDIQA-----FSRAHRIGQNKKVMIYRFVTRA 1153 Query: 175 TIDELVLQRLRTKSTI 190 +++E + Q + K + Sbjct: 1154 SVEERITQVAKKKMML 1169 >gi|73986608|ref|XP_867733.1| PREDICTED: similar to SWI/SNF-related matrix-associated actin-dependent regulator of chromatin a4 isoform 8 [Canis familiaris] Length = 1593 Score = 85.0 bits (209), Expect = 6e-15, Method: Composition-based stats. Identities = 30/160 (18%), Positives = 62/160 (38%), Gaps = 20/160 (12%) Query: 52 HDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAF---------PQGRTLDKDPCT 100 K + L+ I+ +A +++ S + ++ F G T +D Sbjct: 1057 ASGKFELLDRILPKLRATNHKVLLFCQMTSLMTIMEDYFAYRGFKYLRLDGTTKAEDRGM 1116 Query: 101 I-QEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 + + +NE + + + G GLNLQ + ++ F W+ + Q R Sbjct: 1117 LLKTFNEPGSEYFIFLLSTRAGGLGLNLQ-SADTVIIFDSDWNPHQDLQA-----QDRAH 1170 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + G + V V L N+++E +L + K + ++ A Sbjct: 1171 RIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQA 1210 >gi|73997412|ref|XP_867794.1| PREDICTED: similar to chromodomain helicase DNA binding protein 4 isoform 8 [Canis familiaris] Length = 1883 Score = 85.0 bits (209), Expect = 6e-15, Method: Composition-based stats. Identities = 19/136 (13%), Positives = 46/136 (33%), Gaps = 18/136 (13%) Query: 67 NAAPIIVAYHFNSDLARLQ----------KAFPQGRTLDKDPCTIQEWNEG--KIPLLFA 114 +++ L L+ + G T + I +N + Sbjct: 1039 GGHRVLIFSQMTKMLDLLEDFLEHEGYKYERIDGGITGNMRQEAIDRFNAPGAQQFCFLL 1098 Query: 115 HPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQN 174 + G G+NL + ++ + W+ Q +R + G + V +Y + + Sbjct: 1099 STRAGGLGINL-ATADTVIIYDSDWNPHNDIQA-----FSRAHRIGQNKKVMIYRFVTRA 1152 Query: 175 TIDELVLQRLRTKSTI 190 +++E + Q + K + Sbjct: 1153 SVEERITQVAKKKMML 1168 >gi|327276401|ref|XP_003222958.1| PREDICTED: chromodomain-helicase-DNA-binding protein 9-like isoform 1 [Anolis carolinensis] Length = 2892 Score = 85.0 bits (209), Expect = 6e-15, Method: Composition-based stats. Identities = 25/146 (17%), Positives = 51/146 (34%), Gaps = 18/146 (12%) Query: 65 KANAAPIIVAYHFNSDLARLQKAFPQGRTL----------DKDPCTIQEWNEGKIP--LL 112 K+ +++ L L+ R L + I +++ + Sbjct: 1191 KSGGHKVLIFSQMVRCLDILEDYLIHKRYLYERIDGRVRGNLRQAAIDRFSKPDSDRFVF 1250 Query: 113 FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIA 172 + G G+NL + + F W+ + Q R + G +AV VY LI Sbjct: 1251 LLCTRAGGLGINLT-AADTCIIFDSDWNPQNDLQAQARC-----HRIGQNKAVKVYRLIT 1304 Query: 173 QNTIDELVLQRLRTKSTIQDLLLNAL 198 +N+ + + R K + +L ++ Sbjct: 1305 RNSYEREMFDRASLKLGLDKAVLQSM 1330 >gi|254581362|ref|XP_002496666.1| ZYRO0D05346p [Zygosaccharomyces rouxii] gi|238939558|emb|CAR27733.1| ZYRO0D05346p [Zygosaccharomyces rouxii] Length = 1093 Score = 85.0 bits (209), Expect = 6e-15, Method: Composition-based stats. Identities = 27/152 (17%), Positives = 55/152 (36%), Gaps = 20/152 (13%) Query: 53 DEKIKALEVIIEK---ANAAPIIVAYHFNSDLARLQK----------AFPQGRTLDKDPC 99 KI L I+ +++ F L L+ ++ Sbjct: 915 SGKIDKLCEILHHIIVEKKEKVLIFSLFTQMLDILELVLSTLNYKFLRLDGSTQVNDRQS 974 Query: 100 TIQEWNEG-KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQ 158 I ++ E KIP+ + G G+NL N+++F + +R R + Sbjct: 975 LIDKFYEDEKIPIFILSTKAGGFGINLVCANNVIIFD------QSFNPHDDRQAADRSHR 1028 Query: 159 AGFKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 G + V + L+ +++I+E + Q + K + Sbjct: 1029 VGQTKEVTITTLVTKDSIEEKIFQLAKNKLDL 1060 >gi|171687365|ref|XP_001908623.1| hypothetical protein [Podospora anserina S mat+] gi|170943644|emb|CAP69296.1| unnamed protein product [Podospora anserina S mat+] Length = 1001 Score = 85.0 bits (209), Expect = 6e-15, Method: Composition-based stats. Identities = 38/190 (20%), Positives = 74/190 (38%), Gaps = 21/190 (11%) Query: 18 ENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIE--KANAAPIIVAY 75 ++A + + C + + W E K+K+L +I + N +V Sbjct: 782 NELKALSDFELHLWCRDYKCIRSFDLPDGSWGEC--AKVKSLLKLIRGYQKNGDRALVFT 839 Query: 76 HFNSDLARLQKAF---------PQGRT-LDKDPCTIQEWN-EGKIPLLFAHPASCGHGLN 124 F + L + QG T + + I ++N + IP+ S G G+N Sbjct: 840 RFAKVIEILGECLASEGVEYLSLQGNTDVSERQELINQFNADPTIPVFLLTTGSGGTGIN 899 Query: 125 LQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRL 184 L N ++ F + ++ Q R + G R V + LI++ T++ELV + Sbjct: 900 LT-AANKVIIFDQSDNPQDDIQA-----ENRAHRLGQTRPVEIVRLISEGTVEELVYKAC 953 Query: 185 RTKSTIQDLL 194 + K + + + Sbjct: 954 QKKLELANKV 963 >gi|169790814|ref|NP_001013626.2| RAD26L hypothetical protein isoform 1 [Mus musculus] Length = 1537 Score = 85.0 bits (209), Expect = 6e-15, Method: Composition-based stats. Identities = 30/152 (19%), Positives = 60/152 (39%), Gaps = 19/152 (12%) Query: 53 DEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQK---------AFPQGRTLDKDP-CT 100 K+K L+ ++ + +++ L LQ+ G T ++ Sbjct: 505 SGKMKVLQQLLNHFRKQRDKVLLFSFSTKLLDVLQQYCMASGLDYRRLDGSTKSEERLKI 564 Query: 101 IQEWNEG-KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQA 159 ++E+N + + + G GLN G N+++ F W+ Q ++R + Sbjct: 565 VKEFNSSQDVNICLVSTMAGGLGLNF-VGANVVILFDPTWNPANDLQAVDR-----AYRI 618 Query: 160 GFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQ 191 G R V V LI+ T++E++ R K + Sbjct: 619 GQCRDVKVLRLISLGTVEEIMYLRQVYKQQLH 650 >gi|156548320|ref|XP_001602898.1| PREDICTED: similar to chromodomain helicase DNA binding protein [Nasonia vitripennis] Length = 4629 Score = 85.0 bits (209), Expect = 6e-15, Method: Composition-based stats. Identities = 25/146 (17%), Positives = 55/146 (37%), Gaps = 18/146 (12%) Query: 65 KANAAPIIVAYHFNSDLARLQ-----KAFPQGRTLDK-----DPCTIQEWNEGKIP--LL 112 KA+ ++V L L+ K +P R + I +++ + Sbjct: 2206 KASGHRVLVFSQMVKCLDLLEDYLVYKKYPYERIDGRIRGNLRQAAIDRYSKPDSDRFVF 2265 Query: 113 FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIA 172 + G G+NL + ++ + W+ + Q R + G ++ V VY L+ Sbjct: 2266 LLCTKAGGLGINLT-AADTVIIYDSDWNPQNDLQAQARC-----HRIGQQKMVKVYRLLC 2319 Query: 173 QNTIDELVLQRLRTKSTIQDLLLNAL 198 +NT + + + K + +L ++ Sbjct: 2320 RNTYEREMFDKASLKLGLDKAILQSM 2345 >gi|149733277|ref|XP_001502820.1| PREDICTED: chromodomain helicase DNA binding protein 6 [Equus caballus] Length = 2717 Score = 85.0 bits (209), Expect = 6e-15, Method: Composition-based stats. Identities = 25/149 (16%), Positives = 52/149 (34%), Gaps = 18/149 (12%) Query: 66 ANAAPIIVAYHFNSDLARLQKAFPQGR-TLDK---------DPCTIQEWNEGKIP--LLF 113 A +++ L L+ Q R T ++ I + + + Sbjct: 795 AGGHKVLIFSQMVRCLDILEDYLIQRRYTYERIDGRVRGNLRQAAIDRFCKPDSDRFVFL 854 Query: 114 AHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQ 173 + G G+NL + + F W+ + Q R + G +AV VY LI + Sbjct: 855 LCTRAGGLGINLT-AADTCIIFDSDWNPQNDLQAQARC-----HRIGQSKAVKVYRLITR 908 Query: 174 NTIDELVLQRLRTKSTIQDLLLNALKKET 202 N+ + + + K + +L + ++ Sbjct: 909 NSYEREMFDKASLKLGLDKAVLQDINRKG 937 >gi|119613041|gb|EAW92635.1| RAD26L hypothetical protein, isoform CRA_a [Homo sapiens] Length = 700 Score = 85.0 bits (209), Expect = 6e-15, Method: Composition-based stats. Identities = 33/152 (21%), Positives = 61/152 (40%), Gaps = 19/152 (12%) Query: 53 DEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQK---------AFPQGRTLDKDP-CT 100 K+K L+ ++ + N +++ L LQ+ G T ++ Sbjct: 507 SGKMKVLQQLLNHCRKNRDKVLLFSFSTKLLDVLQQYCMASGLDYRRLDGSTKSEERLKI 566 Query: 101 IQEWNE-GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQA 159 ++E+N + + + G GLN G N++V F W+ Q I+R + Sbjct: 567 VKEFNSTQDVNICLVSTMAGGLGLNF-VGANVVVLFDPTWNPANDLQAIDR-----AYRI 620 Query: 160 GFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQ 191 G R V V LI+ T++E++ R K + Sbjct: 621 GQCRDVKVLRLISLGTVEEIMYLRQIYKQQLH 652 >gi|50310795|ref|XP_455420.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140] gi|49644556|emb|CAG98128.1| KLLA0F07513p [Kluyveromyces lactis] Length = 1048 Score = 85.0 bits (209), Expect = 6e-15, Method: Composition-based stats. Identities = 32/164 (19%), Positives = 64/164 (39%), Gaps = 22/164 (13%) Query: 52 HDEKIKALEV----IIEKANAAPIIVAYHFNSDLARLQKAFP-----------QGRTLDK 96 + K++ L+ II+ + ++V F L L+ Q + D+ Sbjct: 870 NSGKVEQLKSVLHKIIDIQHEK-VLVFSLFTQVLDILEFVLSTLNIKFLRLDGQTQVNDR 928 Query: 97 DPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 + + + IP+ + G G+NL N+++F + +R R Sbjct: 929 QSLIDRFYEDDTIPVFLLSTKAGGFGINLVCANNVIIFD------QSFNPHDDRQAADRA 982 Query: 157 RQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKK 200 + G + V V LI+++TI+E +L + K + + KK Sbjct: 983 HRVGQTKEVQVTTLISRDTIEEKILHLAKNKLALDTHISQEDKK 1026 >gi|33641444|gb|AAQ24287.1| chromatin remodeling factor CHROM1 [Homo sapiens] gi|219521584|gb|AAI44623.1| CHD9 protein [Homo sapiens] Length = 2897 Score = 85.0 bits (209), Expect = 6e-15, Method: Composition-based stats. Identities = 25/146 (17%), Positives = 51/146 (34%), Gaps = 18/146 (12%) Query: 65 KANAAPIIVAYHFNSDLARLQKAFPQGRTL----------DKDPCTIQEWNEGKIP--LL 112 KA +++ L L+ R L + I +++ + Sbjct: 1195 KAGGHKVLIFSQMVRCLDILEDYLIHKRYLYERIDGRVRGNLRQAAIDRFSKPDSDRFVF 1254 Query: 113 FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIA 172 + G G+NL + + F W+ + Q R + G +AV VY L+ Sbjct: 1255 LLCTRAGGLGINLT-AADTCIIFDSDWNPQNDLQAQARC-----HRIGQNKAVKVYRLVT 1308 Query: 173 QNTIDELVLQRLRTKSTIQDLLLNAL 198 +N+ + + R K + +L ++ Sbjct: 1309 RNSYEREMFDRASLKLGLDKAVLQSM 1334 >gi|330804465|ref|XP_003290215.1| hypothetical protein DICPUDRAFT_98608 [Dictyostelium purpureum] gi|325079679|gb|EGC33268.1| hypothetical protein DICPUDRAFT_98608 [Dictyostelium purpureum] Length = 1514 Score = 85.0 bits (209), Expect = 6e-15, Method: Composition-based stats. Identities = 32/169 (18%), Positives = 68/169 (40%), Gaps = 23/169 (13%) Query: 44 EEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFP-------------Q 90 +K ++ DE++ L + E N +V + L +++ F Sbjct: 1215 SQKQIEKERDEELSKLP-LPEGKNQFKCLVFSQWTRFLDLIEECFKHNGWNLDEHYCRYD 1273 Query: 91 GRT-LDKDPCTIQEW--NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQM 147 G+ L K I+E+ G ++ G GLNL + N++ +W+ +Q Sbjct: 1274 GKVPLKKRESIIKEFSRESGGPRVMLISLKCGGVGLNL-HRANMVYMCDPYWNSAVEEQA 1332 Query: 148 IERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 I R+ + R + + + ++TI+E ++ TK +++L+ Sbjct: 1333 IGRVD-----RLNQTRDLKIKRFVMRDTIEERIMALQDTKKINSNIILS 1376 >gi|301771978|ref|XP_002921403.1| PREDICTED: transcription activator BRG1-like isoform 1 [Ailuropoda melanoleuca] Length = 1639 Score = 85.0 bits (209), Expect = 6e-15, Method: Composition-based stats. Identities = 30/160 (18%), Positives = 62/160 (38%), Gaps = 20/160 (12%) Query: 52 HDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAF---------PQGRTLDKDPCT 100 K + L+ I+ +A +++ S + ++ F G T +D Sbjct: 1078 ASGKFELLDRILPKLRATNHKVLLFCQMTSLMTIMEDYFAYRGFKYLRLDGTTKAEDRGM 1137 Query: 101 I-QEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 + + +NE + + + G GLNLQ + ++ F W+ + Q R Sbjct: 1138 LLKTFNEPGSEYFIFLLSTRAGGLGLNLQ-SADTVIIFDSDWNPHQDLQA-----QDRAH 1191 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + G + V V L N+++E +L + K + ++ A Sbjct: 1192 RIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQA 1231 >gi|149049421|gb|EDM01875.1| chromodomain helicase DNA binding protein 4, isoform CRA_d [Rattus norvegicus] Length = 659 Score = 85.0 bits (209), Expect = 6e-15, Method: Composition-based stats. Identities = 19/136 (13%), Positives = 46/136 (33%), Gaps = 18/136 (13%) Query: 67 NAAPIIVAYHFNSDLARLQ----------KAFPQGRTLDKDPCTIQEWNEG--KIPLLFA 114 +++ L L+ + G T + I +N + Sbjct: 117 GGHRVLIFSQMTKMLDLLEDFLEHEGYKYERIDGGITGNMRQEAIDRFNAPGAQQFCFLL 176 Query: 115 HPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQN 174 + G G+NL + ++ + W+ Q +R + G + V +Y + + Sbjct: 177 STRAGGLGINL-ATADTVIIYDSDWNPHNDIQA-----FSRAHRIGQNKKVMIYRFVTRA 230 Query: 175 TIDELVLQRLRTKSTI 190 +++E + Q + K + Sbjct: 231 SVEERITQVAKKKMML 246 >gi|73986640|ref|XP_867859.1| PREDICTED: similar to SWI/SNF-related matrix-associated actin-dependent regulator of chromatin a4 isoform 23 [Canis familiaris] gi|73986642|ref|XP_533915.2| PREDICTED: similar to SWI/SNF-related matrix-associated actin-dependent regulator of chromatin a4 isoform 1 [Canis familiaris] Length = 1647 Score = 85.0 bits (209), Expect = 6e-15, Method: Composition-based stats. Identities = 30/160 (18%), Positives = 62/160 (38%), Gaps = 20/160 (12%) Query: 52 HDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAF---------PQGRTLDKDPCT 100 K + L+ I+ +A +++ S + ++ F G T +D Sbjct: 1078 ASGKFELLDRILPKLRATNHKVLLFCQMTSLMTIMEDYFAYRGFKYLRLDGTTKAEDRGM 1137 Query: 101 I-QEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 + + +NE + + + G GLNLQ + ++ F W+ + Q R Sbjct: 1138 LLKTFNEPGSEYFIFLLSTRAGGLGLNLQ-SADTVIIFDSDWNPHQDLQA-----QDRAH 1191 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + G + V V L N+++E +L + K + ++ A Sbjct: 1192 RIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQA 1231 >gi|505088|dbj|BAA05143.1| transcriptional activator hSNF2b [Homo sapiens] gi|902046|gb|AAB40977.1| transcriptional activator [Homo sapiens] Length = 1647 Score = 85.0 bits (209), Expect = 6e-15, Method: Composition-based stats. Identities = 30/160 (18%), Positives = 62/160 (38%), Gaps = 20/160 (12%) Query: 52 HDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAF---------PQGRTLDKDPCT 100 K + L+ I+ +A +++ S + ++ F G T +D Sbjct: 1078 ASGKFELLDRILPKLRATNHKVLLFCQMTSLMTIMEDYFAYRGFKYLRLDGTTKAEDRGM 1137 Query: 101 I-QEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 + + +NE + + + G GLNLQ + ++ F W+ + Q R Sbjct: 1138 LLKTFNEPGSEYFIFLLSTRAGGLGLNLQ-SADTVIIFDSDWNPHQDLQA-----QDRAH 1191 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + G + V V L N+++E +L + K + ++ A Sbjct: 1192 RIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQA 1231 >gi|327296351|ref|XP_003232870.1| DNA excision repair protein [Trichophyton rubrum CBS 118892] gi|326465181|gb|EGD90634.1| DNA excision repair protein [Trichophyton rubrum CBS 118892] Length = 1019 Score = 85.0 bits (209), Expect = 6e-15, Method: Composition-based stats. Identities = 29/138 (21%), Positives = 49/138 (35%), Gaps = 17/138 (12%) Query: 66 ANAAPIIVAYHFNSDLARLQKAF----------PQGRTLDKDPCTIQEWN-EGKIPLLFA 114 AN ++V H L LQ F + + + +N + + + Sbjct: 621 ANGDKVLVFSHNVRLLKMLQMLFNHTSYNVSYLDGSMSYEDRSNIVNAFNSDPRQFVFLI 680 Query: 115 HPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQN 174 + G GLN+ N +V W+ Q R + G R V V+ L++ Sbjct: 681 STKAGGVGLNIT-SANKVVVVDPNWNPAYDLQA-----QDRAYRIGQLRDVEVFRLVSAG 734 Query: 175 TIDELVLQRLRTKSTIQD 192 TI+E+V R K + Sbjct: 735 TIEEIVYARQIYKQQQAN 752 >gi|297698733|ref|XP_002826464.1| PREDICTED: LOW QUALITY PROTEIN: chromodomain-helicase-DNA-binding protein 9-like [Pongo abelii] Length = 2898 Score = 85.0 bits (209), Expect = 6e-15, Method: Composition-based stats. Identities = 25/146 (17%), Positives = 51/146 (34%), Gaps = 18/146 (12%) Query: 65 KANAAPIIVAYHFNSDLARLQKAFPQGRTL----------DKDPCTIQEWNEGKIP--LL 112 KA +++ L L+ R L + I +++ + Sbjct: 1195 KAGGHKVLIFSQMVRCLDILEDYLIHKRYLYERIDGRVRGNLRQAAIDRFSKPDSDRFVF 1254 Query: 113 FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIA 172 + G G+NL + + F W+ + Q R + G +AV VY L+ Sbjct: 1255 LLCTRAGGLGINLT-AADTCIIFDSDWNPQNDLQAQARC-----HRIGQNKAVKVYRLVT 1308 Query: 173 QNTIDELVLQRLRTKSTIQDLLLNAL 198 +N+ + + R K + +L ++ Sbjct: 1309 RNSYEREMFDRASLKLGLDKAVLQSM 1334 >gi|114662475|ref|XP_001165675.1| PREDICTED: chromodomain helicase DNA binding protein 9 isoform 3 [Pan troglodytes] gi|114662477|ref|XP_001165704.1| PREDICTED: chromodomain helicase DNA binding protein 9 isoform 4 [Pan troglodytes] Length = 2898 Score = 85.0 bits (209), Expect = 6e-15, Method: Composition-based stats. Identities = 25/146 (17%), Positives = 51/146 (34%), Gaps = 18/146 (12%) Query: 65 KANAAPIIVAYHFNSDLARLQKAFPQGRTL----------DKDPCTIQEWNEGKIP--LL 112 KA +++ L L+ R L + I +++ + Sbjct: 1195 KAGGHKVLIFSQMVRCLDILEDYLIHKRYLYERIDGRVRGNLRQAAIDRFSKPDSDRFVF 1254 Query: 113 FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIA 172 + G G+NL + + F W+ + Q R + G +AV VY L+ Sbjct: 1255 LLCTRAGGLGINLT-AADTCIIFDSDWNPQNDLQAQARC-----HRIGQNKAVKVYRLVT 1308 Query: 173 QNTIDELVLQRLRTKSTIQDLLLNAL 198 +N+ + + R K + +L ++ Sbjct: 1309 RNSYEREMFDRASLKLGLDKAVLQSM 1334 >gi|326668862|ref|XP_699360.4| PREDICTED: chromodomain-helicase-DNA-binding protein 6 [Danio rerio] Length = 2902 Score = 85.0 bits (209), Expect = 6e-15, Method: Composition-based stats. Identities = 26/149 (17%), Positives = 53/149 (35%), Gaps = 18/149 (12%) Query: 66 ANAAPIIVAYHFNSDLARLQKAFPQGR-TLDK---------DPCTIQEWN--EGKIPLLF 113 A ++V L L+ Q R T ++ I ++ + + Sbjct: 813 AGGHKVLVFSQMVRCLDILEDYLIQRRYTYERIDGRVRGNLRQAAIDRFSKVDSDRFVFL 872 Query: 114 AHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQ 173 + G G+NL + + F W+ + Q R + G +AV VY LI + Sbjct: 873 LCTRAGGLGINLT-AADTCIIFDSDWNPQNDLQAQARC-----HRIGQSKAVKVYRLITR 926 Query: 174 NTIDELVLQRLRTKSTIQDLLLNALKKET 202 N+ + + + K + +L + ++ Sbjct: 927 NSYEREMFDKASLKLGLDKAVLQDINRKG 955 >gi|296232911|ref|XP_002761790.1| PREDICTED: transcription activator BRG1 [Callithrix jacchus] Length = 1679 Score = 85.0 bits (209), Expect = 6e-15, Method: Composition-based stats. Identities = 30/160 (18%), Positives = 62/160 (38%), Gaps = 20/160 (12%) Query: 52 HDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAF---------PQGRTLDKDPCT 100 K + L+ I+ +A +++ S + ++ F G T +D Sbjct: 1078 ASGKFELLDRILPKLRATNHKVLLFCQMTSLMTIMEDYFAYRGFKYLRLDGTTKAEDRGM 1137 Query: 101 I-QEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 + + +NE + + + G GLNLQ + ++ F W+ + Q R Sbjct: 1138 LLKTFNEPGSEYFIFLLSTRAGGLGLNLQ-SADTVIIFDSDWNPHQDLQA-----QDRAH 1191 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + G + V V L N+++E +L + K + ++ A Sbjct: 1192 RIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQA 1231 >gi|294948918|ref|XP_002785960.1| ISWI chromatin remodeling complex ATPase ISW2, putative [Perkinsus marinus ATCC 50983] gi|239900068|gb|EER17756.1| ISWI chromatin remodeling complex ATPase ISW2, putative [Perkinsus marinus ATCC 50983] Length = 876 Score = 85.0 bits (209), Expect = 6e-15, Method: Composition-based stats. Identities = 35/210 (16%), Positives = 70/210 (33%), Gaps = 21/210 (10%) Query: 3 QYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVI 62 + QR L + + N + K Q + + K + L+ + Sbjct: 552 MHQIMQRALCGGHGEQKVALRNVLMQLRKMAQHPYLFLDEYDINDDLVRVSGKFELLDRL 611 Query: 63 IEKA--NAAPIIVAYHFNSDLARLQK----------AFPQGRTLDKDPCTIQEWNEG--- 107 + K +++ L L++ +L+ + +N+ Sbjct: 612 VPKLLHFNHKVLIFSQMTCLLDILEQFLENKGLQWFRLDGSTSLEDRQSAMHRFNDPLNH 671 Query: 108 KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFV 167 + + G GLNLQ N ++ + W+ + Q ++R + G K V V Sbjct: 672 DTNIFLLSTRAGGLGLNLQ-AANTVILYDSDWNPQMDLQAMDR-----AHRVGQKSDVIV 725 Query: 168 YYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 L I+ L+LQ+ TK I ++ Sbjct: 726 LRLTGMCPIERLILQKATTKRNIDKKVIQG 755 >gi|126333962|ref|XP_001368542.1| PREDICTED: similar to RAD26L hypothetical protein, [Monodelphis domestica] Length = 1569 Score = 85.0 bits (209), Expect = 6e-15, Method: Composition-based stats. Identities = 34/152 (22%), Positives = 62/152 (40%), Gaps = 19/152 (12%) Query: 53 DEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQK---------AFPQGRTLDKDP-CT 100 K+K L+ ++ K N +++ L L++ G T ++ Sbjct: 521 SGKMKVLQQLLNHCKKNRDKVLLFSFSTKLLDVLEQYCMATGLDYRRLDGSTKSEERVKI 580 Query: 101 IQEWNE-GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQA 159 ++E+N I + + G GLN G N++V F W+ Q I+R + Sbjct: 581 VKEFNSTQDINICLVSTMAGGLGLNF-VGANVVVIFDPTWNPANDLQAIDR-----AYRI 634 Query: 160 GFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQ 191 G R V V+ LI+ T++E++ R K + Sbjct: 635 GQCRDVKVFRLISLGTVEEIMYLRQVYKQQLH 666 >gi|192807323|ref|NP_001122321.1| transcription activator BRG1 isoform A [Homo sapiens] gi|10946129|gb|AAG24790.1|AF254822_2 SMARCA4 isoform 2 [Homo sapiens] gi|119604570|gb|EAW84164.1| SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, isoform CRA_c [Homo sapiens] Length = 1679 Score = 85.0 bits (209), Expect = 6e-15, Method: Composition-based stats. Identities = 30/160 (18%), Positives = 62/160 (38%), Gaps = 20/160 (12%) Query: 52 HDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAF---------PQGRTLDKDPCT 100 K + L+ I+ +A +++ S + ++ F G T +D Sbjct: 1078 ASGKFELLDRILPKLRATNHKVLLFCQMTSLMTIMEDYFAYRGFKYLRLDGTTKAEDRGM 1137 Query: 101 I-QEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 + + +NE + + + G GLNLQ + ++ F W+ + Q R Sbjct: 1138 LLKTFNEPGSEYFIFLLSTRAGGLGLNLQ-SADTVIIFDSDWNPHQDLQA-----QDRAH 1191 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + G + V V L N+++E +L + K + ++ A Sbjct: 1192 RIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQA 1231 >gi|326477646|gb|EGE01656.1| DNA excision repair protein [Trichophyton equinum CBS 127.97] Length = 1019 Score = 85.0 bits (209), Expect = 6e-15, Method: Composition-based stats. Identities = 29/138 (21%), Positives = 49/138 (35%), Gaps = 17/138 (12%) Query: 66 ANAAPIIVAYHFNSDLARLQKAF----------PQGRTLDKDPCTIQEWN-EGKIPLLFA 114 AN ++V H L LQ F + + + +N + + + Sbjct: 621 ANGDKVLVFSHNVRLLKMLQMLFNHTSYNVSYLDGSMSYEDRSNIVNAFNSDPRQFVFLI 680 Query: 115 HPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQN 174 + G GLN+ N +V W+ Q R + G R V V+ L++ Sbjct: 681 STKAGGVGLNIT-SANKVVVVDPNWNPAYDLQA-----QDRAYRIGQLRDVEVFRLVSAG 734 Query: 175 TIDELVLQRLRTKSTIQD 192 TI+E+V R K + Sbjct: 735 TIEEIVYARQIYKQQQAN 752 >gi|296485891|gb|DAA28006.1| SWI/SNF-related matrix-associated actin-dependent regulator of chromatin a4 [Bos taurus] Length = 1605 Score = 85.0 bits (209), Expect = 6e-15, Method: Composition-based stats. Identities = 30/160 (18%), Positives = 62/160 (38%), Gaps = 20/160 (12%) Query: 52 HDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAF---------PQGRTLDKDPCT 100 K + L+ I+ +A +++ S + ++ F G T +D Sbjct: 1070 ASGKFELLDRILPKLRATNHKVLLFCQMTSLMTIMEDYFAYRGFKYLRLDGTTKAEDRGM 1129 Query: 101 I-QEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 + + +NE + + + G GLNLQ + ++ F W+ + Q R Sbjct: 1130 LLKTFNEPGSEYFIFLLSTRAGGLGLNLQ-SADTVIIFDSDWNPHQDLQA-----QDRAH 1183 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + G + V V L N+++E +L + K + ++ A Sbjct: 1184 RIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQA 1223 >gi|224064310|ref|XP_002193588.1| PREDICTED: chromodomain helicase DNA binding protein 9 [Taeniopygia guttata] Length = 2346 Score = 85.0 bits (209), Expect = 6e-15, Method: Composition-based stats. Identities = 26/146 (17%), Positives = 51/146 (34%), Gaps = 18/146 (12%) Query: 65 KANAAPIIVAYHFNSDLARLQKAFPQGRTL----------DKDPCTIQEWNEGKIP--LL 112 KA +++ L L+ R L + I +++ + Sbjct: 665 KAGGHKVLIFSQMVRCLDILEDYLIHKRYLYERIDGRVRGNLRQAAIDRFSKPDSDRFVF 724 Query: 113 FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIA 172 + G G+NL + + F W+ + Q R + G +AV VY LI Sbjct: 725 LLCTRAGGLGINLT-AADTCIIFDSDWNPQNDLQAQARC-----HRIGQNKAVKVYRLIT 778 Query: 173 QNTIDELVLQRLRTKSTIQDLLLNAL 198 +N+ + + R K + +L ++ Sbjct: 779 RNSYEREMFDRASLKLGLDKAVLQSM 804 >gi|157785561|ref|NP_001099084.1| transcription activator BRG1 [Bos taurus] gi|288559138|sp|A7Z019|SMCA4_BOVIN RecName: Full=Transcription activator BRG1; AltName: Full=ATP-dependent helicase SMARCA4; AltName: Full=BRG1-associated factor 190A; Short=BAF190A; AltName: Full=Protein brahma homolog 1; AltName: Full=SNF2-beta; AltName: Full=SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 4 gi|157278973|gb|AAI53217.1| SMARCA4 protein [Bos taurus] Length = 1606 Score = 85.0 bits (209), Expect = 6e-15, Method: Composition-based stats. Identities = 30/160 (18%), Positives = 62/160 (38%), Gaps = 20/160 (12%) Query: 52 HDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAF---------PQGRTLDKDPCT 100 K + L+ I+ +A +++ S + ++ F G T +D Sbjct: 1070 ASGKFELLDRILPKLRATNHKVLLFCQMTSLMTIMEDYFAYRGFKYLRLDGTTKAEDRGM 1129 Query: 101 I-QEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 + + +NE + + + G GLNLQ + ++ F W+ + Q R Sbjct: 1130 LLKTFNEPGSEYFIFLLSTRAGGLGLNLQ-SADTVIIFDSDWNPHQDLQA-----QDRAH 1183 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + G + V V L N+++E +L + K + ++ A Sbjct: 1184 RIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQA 1223 >gi|21071056|ref|NP_003063.2| transcription activator BRG1 isoform B [Homo sapiens] gi|192807312|ref|NP_001122316.1| transcription activator BRG1 isoform B [Homo sapiens] gi|116242792|sp|P51532|SMCA4_HUMAN RecName: Full=Transcription activator BRG1; AltName: Full=ATP-dependent helicase SMARCA4; AltName: Full=BRG1-associated factor 190A; Short=BAF190A; AltName: Full=Mitotic growth and transcription activator; AltName: Full=Protein BRG-1; AltName: Full=Protein brahma homolog 1; AltName: Full=SNF2-beta; AltName: Full=SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 4 gi|10946128|gb|AAG24789.1|AF254822_1 SMARCA4 isoform 1 [Homo sapiens] gi|119604568|gb|EAW84162.1| SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, isoform CRA_a [Homo sapiens] gi|152013071|gb|AAI50299.1| SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4 [Homo sapiens] gi|158261089|dbj|BAF82722.1| unnamed protein product [Homo sapiens] Length = 1647 Score = 85.0 bits (209), Expect = 6e-15, Method: Composition-based stats. Identities = 30/160 (18%), Positives = 62/160 (38%), Gaps = 20/160 (12%) Query: 52 HDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAF---------PQGRTLDKDPCT 100 K + L+ I+ +A +++ S + ++ F G T +D Sbjct: 1078 ASGKFELLDRILPKLRATNHKVLLFCQMTSLMTIMEDYFAYRGFKYLRLDGTTKAEDRGM 1137 Query: 101 I-QEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 + + +NE + + + G GLNLQ + ++ F W+ + Q R Sbjct: 1138 LLKTFNEPGSEYFIFLLSTRAGGLGLNLQ-SADTVIIFDSDWNPHQDLQA-----QDRAH 1191 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + G + V V L N+++E +L + K + ++ A Sbjct: 1192 RIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQA 1231 >gi|326473181|gb|EGD97190.1| DNA excision repair protein [Trichophyton tonsurans CBS 112818] Length = 1019 Score = 85.0 bits (209), Expect = 6e-15, Method: Composition-based stats. Identities = 29/138 (21%), Positives = 49/138 (35%), Gaps = 17/138 (12%) Query: 66 ANAAPIIVAYHFNSDLARLQKAF----------PQGRTLDKDPCTIQEWN-EGKIPLLFA 114 AN ++V H L LQ F + + + +N + + + Sbjct: 621 ANGDKVLVFSHNVRLLKMLQMLFNHTSYNVSYLDGSMSYEDRSNIVNAFNSDPRQFVFLI 680 Query: 115 HPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQN 174 + G GLN+ N +V W+ Q R + G R V V+ L++ Sbjct: 681 STKAGGVGLNIT-SANKVVVVDPNWNPAYDLQA-----QDRAYRIGQLRDVEVFRLVSAG 734 Query: 175 TIDELVLQRLRTKSTIQD 192 TI+E+V R K + Sbjct: 735 TIEEIVYARQIYKQQQAN 752 >gi|297703590|ref|XP_002828720.1| PREDICTED: transcription activator BRG1-like isoform 2 [Pongo abelii] Length = 1647 Score = 85.0 bits (209), Expect = 6e-15, Method: Composition-based stats. Identities = 30/160 (18%), Positives = 62/160 (38%), Gaps = 20/160 (12%) Query: 52 HDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAF---------PQGRTLDKDPCT 100 K + L+ I+ +A +++ S + ++ F G T +D Sbjct: 1078 ASGKFELLDRILPKLRATNHKVLLFCQMTSLMTIMEDYFAYRGFKYLRLDGTTKAEDRGM 1137 Query: 101 I-QEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 + + +NE + + + G GLNLQ + ++ F W+ + Q R Sbjct: 1138 LLKTFNEPGSEYFIFLLSTRAGGLGLNLQ-SADTVIIFDSDWNPHQDLQA-----QDRAH 1191 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + G + V V L N+++E +L + K + ++ A Sbjct: 1192 RIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQA 1231 >gi|297703588|ref|XP_002828719.1| PREDICTED: transcription activator BRG1-like isoform 1 [Pongo abelii] Length = 1679 Score = 85.0 bits (209), Expect = 6e-15, Method: Composition-based stats. Identities = 30/160 (18%), Positives = 62/160 (38%), Gaps = 20/160 (12%) Query: 52 HDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAF---------PQGRTLDKDPCT 100 K + L+ I+ +A +++ S + ++ F G T +D Sbjct: 1078 ASGKFELLDRILPKLRATNHKVLLFCQMTSLMTIMEDYFAYRGFKYLRLDGTTKAEDRGM 1137 Query: 101 I-QEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 + + +NE + + + G GLNLQ + ++ F W+ + Q R Sbjct: 1138 LLKTFNEPGSEYFIFLLSTRAGGLGLNLQ-SADTVIIFDSDWNPHQDLQA-----QDRAH 1191 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + G + V V L N+++E +L + K + ++ A Sbjct: 1192 RIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQA 1231 >gi|119603200|gb|EAW82794.1| chromodomain helicase DNA binding protein 9, isoform CRA_b [Homo sapiens] Length = 2785 Score = 85.0 bits (209), Expect = 6e-15, Method: Composition-based stats. Identities = 25/146 (17%), Positives = 51/146 (34%), Gaps = 18/146 (12%) Query: 65 KANAAPIIVAYHFNSDLARLQKAFPQGRTL----------DKDPCTIQEWNEGKIP--LL 112 KA +++ L L+ R L + I +++ + Sbjct: 1195 KAGGHKVLIFSQMVRCLDILEDYLIHKRYLYERIDGRVRGNLRQAAIDRFSKPDSDRFVF 1254 Query: 113 FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIA 172 + G G+NL + + F W+ + Q R + G +AV VY L+ Sbjct: 1255 LLCTRAGGLGINLT-AADTCIIFDSDWNPQNDLQAQARC-----HRIGQNKAVKVYRLVT 1308 Query: 173 QNTIDELVLQRLRTKSTIQDLLLNAL 198 +N+ + + R K + +L ++ Sbjct: 1309 RNSYEREMFDRASLKLGLDKAVLQSM 1334 >gi|114558338|ref|XP_001157674.1| PREDICTED: hypothetical protein isoform 1 [Pan troglodytes] gi|114558340|ref|XP_001157728.1| PREDICTED: hypothetical protein isoform 2 [Pan troglodytes] Length = 615 Score = 85.0 bits (209), Expect = 6e-15, Method: Composition-based stats. Identities = 35/217 (16%), Positives = 79/217 (36%), Gaps = 35/217 (16%) Query: 1 MKQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDE--------EKHWKEVH 52 MK F+ E + ++ N S+ KC + +D H E Sbjct: 14 MKDLDAFENET-----AKKVKLQNILSQLRKC---VDHPYLFDGVEPEPFEVGDHLIE-A 64 Query: 53 DEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAFP---------QGRTLDKDPC-T 100 K+ L+ ++ + +++ L LQ G ++ Sbjct: 65 SGKLHLLDKLLAFLYSGGHRVLLFSQMTQMLDILQDYMDYRGYSYERVDGSVRGEERHLA 124 Query: 101 IQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 I+ + I + + G G+NL + ++F ++ + Q R + G Sbjct: 125 IKNFGRQPIFVFLLSTRAGGVGMNLT-AADTVIFVDSDFNPQNDLQAAAR-----AHRIG 178 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 ++V V LI ++T++E+V ++ +K + ++++ Sbjct: 179 QNKSVKVIRLIGRDTVEEIVYRKAASKLQLTNMIIEG 215 >gi|301616286|ref|XP_002937591.1| PREDICTED: chromodomain-helicase-DNA-binding protein 5-like [Xenopus (Silurana) tropicalis] Length = 1906 Score = 84.6 bits (208), Expect = 6e-15, Method: Composition-based stats. Identities = 19/136 (13%), Positives = 45/136 (33%), Gaps = 18/136 (13%) Query: 67 NAAPIIVAYHFNSDLARLQ----------KAFPQGRTLDKDPCTIQEWNEG--KIPLLFA 114 +++ L L+ + G T I +N + Sbjct: 1031 GGHRVLIFSQMTKMLDLLEDFLEYEGYKYERIDGGITGGLRQEAIDRFNAPGAQQFCFLL 1090 Query: 115 HPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQN 174 + G G+NL + ++ + W+ Q +R + G + V +Y + + Sbjct: 1091 STRAGGLGINL-ATADTVIIYDSDWNPHNDIQA-----FSRAHRIGQNKKVMIYRFVTRA 1144 Query: 175 TIDELVLQRLRTKSTI 190 +++E + Q + K + Sbjct: 1145 SVEERITQVAKRKMML 1160 >gi|255726412|ref|XP_002548132.1| hypothetical protein CTRG_02428 [Candida tropicalis MYA-3404] gi|240134056|gb|EER33611.1| hypothetical protein CTRG_02428 [Candida tropicalis MYA-3404] Length = 672 Score = 84.6 bits (208), Expect = 6e-15, Method: Composition-based stats. Identities = 33/161 (20%), Positives = 63/161 (39%), Gaps = 20/161 (12%) Query: 53 DEKIKALEVIIEK--ANAAPIIVAYH------FNSDLAR---LQKAFPQGRTLDKDPCT- 100 K + L+ I+ K + +++ + D R ++ G T +D Sbjct: 196 SGKFELLDRILPKFKKSGHRVLMFFQMTQVMDIMEDFLRWRNMKYLRLDGGTKAEDRQDM 255 Query: 101 IQEWNEGKIPLL--FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQ 158 ++ +N + G GLNLQ + +V F W+ + Q R + Sbjct: 256 LKVFNAPDSEYFCFLLSTRAGGLGLNLQT-ADTVVIFDTDWNPHQDLQA-----QDRAHR 309 Query: 159 AGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 G K V + LI ++++E++L+R K I ++ A K Sbjct: 310 IGQKNEVRILRLITNDSVEEMILERAHQKLDIDGKVIQAGK 350 >gi|67763824|ref|NP_033236.2| helicase-like transcription factor isoform 1 [Mus musculus] gi|60390920|sp|Q6PCN7|HLTF_MOUSE RecName: Full=Helicase-like transcription factor; AltName: Full=P113; AltName: Full=SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 3; AltName: Full=Sucrose nonfermenting protein 2-like 3; AltName: Full=TNF-response element-binding protein gi|34785644|gb|AAH57116.1| Helicase-like transcription factor [Mus musculus] gi|37590668|gb|AAH59240.1| Helicase-like transcription factor [Mus musculus] gi|148702945|gb|EDL34892.1| mCG123397, isoform CRA_c [Mus musculus] Length = 1003 Score = 84.6 bits (208), Expect = 6e-15, Method: Composition-based stats. Identities = 34/181 (18%), Positives = 64/181 (35%), Gaps = 23/181 (12%) Query: 39 AVYYDEEKHWKEVHDEKIKALE-VIIEKANAAP---IIVAYHFNSDLARLQKAFPQGRTL 94 A D+E + KI AL +IE P +V F + L+ ++ + Sbjct: 812 ACDSDKESSMEWKSSSKINALMHALIELRTKDPNIKSLVVSQFTTFLSLIETPLKASGFV 871 Query: 95 ----------DKDPCTIQEWNE---GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDL 141 K +IQ + G ++ + G GLNL + + W+ Sbjct: 872 FTRLDGSMAQKKRVESIQRFQNTEAGSPTIMLLSLKAGGVGLNL-CAASRVFLMDPAWNP 930 Query: 142 EEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 Q +R + G K+ V + I +++++E +L+ TK + K + Sbjct: 931 AAEDQCFDRC-----HRLGQKQEVIITKFIVKDSVEENMLKIQNTKRDLAAGAFGTKKTD 985 Query: 202 T 202 Sbjct: 986 A 986 >gi|171691859|ref|XP_001910854.1| hypothetical protein [Podospora anserina S mat+] gi|170945878|emb|CAP72679.1| unnamed protein product [Podospora anserina S mat+] Length = 1274 Score = 84.6 bits (208), Expect = 7e-15, Method: Composition-based stats. Identities = 33/226 (14%), Positives = 79/226 (34%), Gaps = 37/226 (16%) Query: 1 MKQYHKFQRELYCDLQGENIEAFNSASKTVKCLQL----ANGAVYYDE----------EK 46 M++ + R ++ ++A S + +QL + +Y + Sbjct: 795 MEKNPQLIRSIFAQ---GKLKANERGSLSNILMQLRKCLCHPFIYSQAIEDRNLSPELTR 851 Query: 47 HWKEVHDEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQ----------KAFPQGRTL 94 K+ LE+++ K +++ F L L+ + ++ Sbjct: 852 RNLIEASSKLMLLEIMLPKLKERGHRVLIFSQFLDQLTVLEDFLMSLNLRHERLDGSQSS 911 Query: 95 DKDPCTIQEWNEGKIPLL--FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIG 152 + I +N + + G G+NL + ++ W+ + Q + R Sbjct: 912 LEKQKKIDAYNAPDSDIFCMLLSTRAGGVGINL-ATADTVIILDPDWNPHQDIQALSR-- 968 Query: 153 VTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNAL 198 + G ++ V + L+ ++ +E +LQ R K + LL+ + Sbjct: 969 ---AHRIGQRKKVLCFQLVTVDSAEEKILQIGRKKMALDHLLIETM 1011 >gi|126322839|ref|XP_001362962.1| PREDICTED: similar to SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, isoform 2 [Monodelphis domestica] Length = 1612 Score = 84.6 bits (208), Expect = 7e-15, Method: Composition-based stats. Identities = 30/160 (18%), Positives = 62/160 (38%), Gaps = 20/160 (12%) Query: 52 HDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAF---------PQGRTLDKDPCT 100 K + L+ I+ +A +++ S + ++ F G T +D Sbjct: 1077 ASGKFELLDRILPKLRATNHKVLLFCQMTSLMTIMEDYFAYRGFKYLRLDGTTKAEDRGM 1136 Query: 101 I-QEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 + + +NE + + + G GLNLQ + ++ F W+ + Q R Sbjct: 1137 LLKTFNEPGSEYFIFLLSTRAGGLGLNLQ-SADTVIIFDSDWNPHQDLQA-----QDRAH 1190 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + G + V V L N+++E +L + K + ++ A Sbjct: 1191 RIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQA 1230 >gi|73997444|ref|XP_867907.1| PREDICTED: similar to chromodomain helicase DNA binding protein 4 isoform 23 [Canis familiaris] Length = 1895 Score = 84.6 bits (208), Expect = 7e-15, Method: Composition-based stats. Identities = 19/136 (13%), Positives = 46/136 (33%), Gaps = 18/136 (13%) Query: 67 NAAPIIVAYHFNSDLARLQ----------KAFPQGRTLDKDPCTIQEWNEG--KIPLLFA 114 +++ L L+ + G T + I +N + Sbjct: 1048 GGHRVLIFSQMTKMLDLLEDFLEHEGYKYERIDGGITGNMRQEAIDRFNAPGAQQFCFLL 1107 Query: 115 HPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQN 174 + G G+NL + ++ + W+ Q +R + G + V +Y + + Sbjct: 1108 STRAGGLGINL-ATADTVIIYDSDWNPHNDIQA-----FSRAHRIGQNKKVMIYRFVTRA 1161 Query: 175 TIDELVLQRLRTKSTI 190 +++E + Q + K + Sbjct: 1162 SVEERITQVAKKKMML 1177 >gi|15079181|ref|NP_149635.1| 172L [Invertebrate iridescent virus 6] gi|82013408|sp|O55764|172L_IIV6 RecName: Full=Putative helicase 172L gi|15042550|gb|AAA62412.2| 172L [Invertebrate iridescent virus 6] Length = 606 Score = 84.6 bits (208), Expect = 7e-15, Method: Composition-based stats. Identities = 32/149 (21%), Positives = 57/149 (38%), Gaps = 17/149 (11%) Query: 63 IEKANAAPIIVAYHFNSDLARLQKAFPQ-----------GRTLDKDPCTIQEWNEGKIPL 111 E ++ IIV F S L L +A + G T ++ Q N+ Sbjct: 443 FEISHPTKIIVFSMFTSCLDLLSEAIKEDYPNFKFVQVDGDTKNRSELFDQFKNDINTQG 502 Query: 112 LFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLI 171 LF GLNL + + WW H Q R+ + G + V+V+ +I Sbjct: 503 LFLTYKVGSEGLNLTEATHCIC-IEPWWTNAVHNQAKARLW-----RTGQTKQVYVHNVI 556 Query: 172 AQNTIDELVLQRLRTKSTIQDLLLNALKK 200 + +I+E +++ + K + L ++ Sbjct: 557 IEGSIEEKIVEICKGKDDMAASYLEGKER 585 >gi|261860470|dbj|BAI46757.1| chromodomain helicase DNA binding protein 9 [synthetic construct] Length = 2012 Score = 84.6 bits (208), Expect = 7e-15, Method: Composition-based stats. Identities = 25/146 (17%), Positives = 51/146 (34%), Gaps = 18/146 (12%) Query: 65 KANAAPIIVAYHFNSDLARLQKAFPQGRTL----------DKDPCTIQEWNEGKIP--LL 112 KA +++ L L+ R L + I +++ + Sbjct: 309 KAGGHKVLIFSQMVRCLDILEDYLIHKRYLYERIDGRVRGNLRQAAIDRFSKPDSDRFVF 368 Query: 113 FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIA 172 + G G+NL + + F W+ + Q R + G +AV VY L+ Sbjct: 369 LLCTRAGGLGINLT-AADTCIIFDSDWNPQNDLQAQARC-----HRIGQNKAVKVYRLVT 422 Query: 173 QNTIDELVLQRLRTKSTIQDLLLNAL 198 +N+ + + R K + +L ++ Sbjct: 423 RNSYEREMFDRASLKLGLDKAVLQSM 448 >gi|329663886|ref|NP_001192579.1| chromodomain-helicase-DNA-binding protein 9 [Bos taurus] gi|297485264|ref|XP_002694824.1| PREDICTED: kismet-like [Bos taurus] gi|296478067|gb|DAA20182.1| kismet-like [Bos taurus] Length = 2883 Score = 84.6 bits (208), Expect = 7e-15, Method: Composition-based stats. Identities = 25/146 (17%), Positives = 51/146 (34%), Gaps = 18/146 (12%) Query: 65 KANAAPIIVAYHFNSDLARLQKAFPQGRTL----------DKDPCTIQEWNEGKIP--LL 112 KA +++ L L+ R L + I +++ + Sbjct: 1196 KAGGHKVLIFSQMVRCLDILEDYLIHKRYLYERIDGRVRGNLRQAAIDRFSKPDSDRFVF 1255 Query: 113 FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIA 172 + G G+NL + + F W+ + Q R + G +AV VY L+ Sbjct: 1256 LLCTRAGGLGINLT-AADTCIIFDSDWNPQNDLQAQARC-----HRIGQNKAVKVYRLVT 1309 Query: 173 QNTIDELVLQRLRTKSTIQDLLLNAL 198 +N+ + + R K + +L ++ Sbjct: 1310 RNSYEREMFDRASLKLGLDKAVLQSM 1335 >gi|194386148|dbj|BAG59638.1| unnamed protein product [Homo sapiens] Length = 693 Score = 84.6 bits (208), Expect = 7e-15, Method: Composition-based stats. Identities = 34/216 (15%), Positives = 79/216 (36%), Gaps = 33/216 (15%) Query: 1 MKQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYD-------EEKHWKEVHD 53 MK F+ E + ++ N S+ KC + +D E Sbjct: 91 MKDLDAFENET-----AKKVKLQNILSQLRKC---VDHPYLFDGVEPEPFEVGDHLTEAS 142 Query: 54 EKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAFP---------QGRTLDKDPC-TI 101 K+ L+ ++ + +++ L LQ G ++ I Sbjct: 143 GKLHLLDKLLAFLYSGGHRVLLFSQMTQMLDILQDYMDYRGYSYERVDGSVRGEERHLAI 202 Query: 102 QEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGF 161 + + + I + + G G+NL + ++F ++ + Q R + G Sbjct: 203 KNFGQQPIFVFLLSTRAGGVGMNLT-AADTVIFVDSDFNPQNDLQAAAR-----AHRIGQ 256 Query: 162 KRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 ++V V LI ++T++E+V ++ +K + ++++ Sbjct: 257 NKSVKVIRLIGRDTVEEIVYRKAASKLQLTNMIIEG 292 >gi|73997446|ref|XP_867915.1| PREDICTED: similar to chromodomain helicase DNA binding protein 4 isoform 24 [Canis familiaris] Length = 1892 Score = 84.6 bits (208), Expect = 7e-15, Method: Composition-based stats. Identities = 19/136 (13%), Positives = 46/136 (33%), Gaps = 18/136 (13%) Query: 67 NAAPIIVAYHFNSDLARLQ----------KAFPQGRTLDKDPCTIQEWNEG--KIPLLFA 114 +++ L L+ + G T + I +N + Sbjct: 1045 GGHRVLIFSQMTKMLDLLEDFLEHEGYKYERIDGGITGNMRQEAIDRFNAPGAQQFCFLL 1104 Query: 115 HPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQN 174 + G G+NL + ++ + W+ Q +R + G + V +Y + + Sbjct: 1105 STRAGGLGINL-ATADTVIIYDSDWNPHNDIQA-----FSRAHRIGQNKKVMIYRFVTRA 1158 Query: 175 TIDELVLQRLRTKSTI 190 +++E + Q + K + Sbjct: 1159 SVEERITQVAKKKMML 1174 >gi|82704891|ref|XP_726740.1| helicase [Plasmodium yoelii yoelii str. 17XNL] gi|23482279|gb|EAA18305.1| Helicase conserved C-terminal domain, putative [Plasmodium yoelii yoelii] Length = 1472 Score = 84.6 bits (208), Expect = 7e-15, Method: Composition-based stats. Identities = 29/149 (19%), Positives = 57/149 (38%), Gaps = 18/149 (12%) Query: 65 KANAAPIIVAYHFNSDLARLQ-----KAFPQGRTLDKDPC-----TIQEWNEGK--IPLL 112 +A +++ F L L+ + + R I+E+N + Sbjct: 41 EAKMHKVLIFTQFQLVLDELEEYCKYRCWKYMRLDGSTNKLIRELDIREFNLSDSIYFIY 100 Query: 113 FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIA 172 + G G+NL N ++ + W+ Q I+R + G KR V V+ L+ Sbjct: 101 LISTRAGGLGINLT-AANHVIMYDEDWNPFIDLQAIDR-----AHRIGQKREVNVWKLMT 154 Query: 173 QNTIDELVLQRLRTKSTIQDLLLNALKKE 201 + T++E + R K + L++ + E Sbjct: 155 EWTVEERMAFRREQKLKLDKLVVQTQEDE 183 >gi|332028347|gb|EGI68394.1| SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1 [Acromyrmex echinatior] Length = 845 Score = 84.6 bits (208), Expect = 7e-15, Method: Composition-based stats. Identities = 23/153 (15%), Positives = 62/153 (40%), Gaps = 19/153 (12%) Query: 55 KIKALEVIIEKA--NAAPIIVAYHFNSDLARLQK----------AFPQGRTLDKDPCTIQ 102 K+K L+ I+ + + +++ F L L++ + + I Sbjct: 647 KLKELDKILPQLKTDGHRVLIFSQFTMVLDILEEYLTIRGQTFLRLDGSTPVTERQTLIN 706 Query: 103 EW-NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGF 161 ++ + I + + G G+NL + ++ + ++ +Q +R + G Sbjct: 707 KYTEDPSIFIFLLSTRAGGLGINLT-AADTVILHDIDFNPYNDKQAEDRC-----HRVGQ 760 Query: 162 KRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 K+ V + L+++ TI+E + + + K ++ + Sbjct: 761 KKPVSIIRLLSEGTIEEGMYEIAQEKLHLEQQI 793 >gi|297283992|ref|XP_002808345.1| PREDICTED: LOW QUALITY PROTEIN: chromodomain-helicase-DNA-binding protein 9-like [Macaca mulatta] Length = 2901 Score = 84.6 bits (208), Expect = 7e-15, Method: Composition-based stats. Identities = 25/146 (17%), Positives = 51/146 (34%), Gaps = 18/146 (12%) Query: 65 KANAAPIIVAYHFNSDLARLQKAFPQGRTL----------DKDPCTIQEWNEGKIP--LL 112 KA +++ L L+ R L + I +++ + Sbjct: 1195 KAGGHKVLIFSQMVRCLDILEDYLIHKRYLYERIDGRVRGNLRQAAIDRFSKPDSDRFVF 1254 Query: 113 FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIA 172 + G G+NL + + F W+ + Q R + G +AV VY L+ Sbjct: 1255 LLCTRAGGLGINLT-AADTCIIFDSDWNPQNDLQAQARC-----HRIGQNKAVKVYRLVT 1308 Query: 173 QNTIDELVLQRLRTKSTIQDLLLNAL 198 +N+ + + R K + +L ++ Sbjct: 1309 RNSYEREMFDRASLKLGLDKAVLQSM 1334 >gi|330417956|ref|NP_001193430.1| chromodomain-helicase-DNA-binding protein 4 [Bos taurus] gi|296487143|gb|DAA29256.1| chromodomain helicase DNA binding protein 4 [Bos taurus] Length = 1912 Score = 84.6 bits (208), Expect = 7e-15, Method: Composition-based stats. Identities = 19/136 (13%), Positives = 46/136 (33%), Gaps = 18/136 (13%) Query: 67 NAAPIIVAYHFNSDLARLQ----------KAFPQGRTLDKDPCTIQEWNEG--KIPLLFA 114 +++ L L+ + G T + I +N + Sbjct: 1065 GGHRVLIFSQMTKMLDLLEDFLEHEGYKYERIDGGITGNMRQEAIDRFNAPGAQQFCFLL 1124 Query: 115 HPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQN 174 + G G+NL + ++ + W+ Q +R + G + V +Y + + Sbjct: 1125 STRAGGLGINL-ATADTVIIYDSDWNPHNDIQA-----FSRAHRIGQNKKVMIYRFVTRA 1178 Query: 175 TIDELVLQRLRTKSTI 190 +++E + Q + K + Sbjct: 1179 SVEERITQVAKKKMML 1194 >gi|73997448|ref|XP_534909.2| PREDICTED: similar to chromodomain helicase DNA binding protein 4 isoform 1 [Canis familiaris] Length = 1912 Score = 84.6 bits (208), Expect = 7e-15, Method: Composition-based stats. Identities = 19/136 (13%), Positives = 46/136 (33%), Gaps = 18/136 (13%) Query: 67 NAAPIIVAYHFNSDLARLQ----------KAFPQGRTLDKDPCTIQEWNEG--KIPLLFA 114 +++ L L+ + G T + I +N + Sbjct: 1065 GGHRVLIFSQMTKMLDLLEDFLEHEGYKYERIDGGITGNMRQEAIDRFNAPGAQQFCFLL 1124 Query: 115 HPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQN 174 + G G+NL + ++ + W+ Q +R + G + V +Y + + Sbjct: 1125 STRAGGLGINL-ATADTVIIYDSDWNPHNDIQA-----FSRAHRIGQNKKVMIYRFVTRA 1178 Query: 175 TIDELVLQRLRTKSTI 190 +++E + Q + K + Sbjct: 1179 SVEERITQVAKKKMML 1194 >gi|73997402|ref|XP_867754.1| PREDICTED: similar to chromodomain helicase DNA binding protein 4 isoform 3 [Canis familiaris] Length = 1905 Score = 84.6 bits (208), Expect = 7e-15, Method: Composition-based stats. Identities = 19/136 (13%), Positives = 46/136 (33%), Gaps = 18/136 (13%) Query: 67 NAAPIIVAYHFNSDLARLQ----------KAFPQGRTLDKDPCTIQEWNEG--KIPLLFA 114 +++ L L+ + G T + I +N + Sbjct: 1058 GGHRVLIFSQMTKMLDLLEDFLEHEGYKYERIDGGITGNMRQEAIDRFNAPGAQQFCFLL 1117 Query: 115 HPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQN 174 + G G+NL + ++ + W+ Q +R + G + V +Y + + Sbjct: 1118 STRAGGLGINL-ATADTVIIYDSDWNPHNDIQA-----FSRAHRIGQNKKVMIYRFVTRA 1171 Query: 175 TIDELVLQRLRTKSTI 190 +++E + Q + K + Sbjct: 1172 SVEERITQVAKKKMML 1187 >gi|73997420|ref|XP_867825.1| PREDICTED: similar to chromodomain helicase DNA binding protein 4 isoform 12 [Canis familiaris] Length = 1925 Score = 84.6 bits (208), Expect = 7e-15, Method: Composition-based stats. Identities = 19/136 (13%), Positives = 46/136 (33%), Gaps = 18/136 (13%) Query: 67 NAAPIIVAYHFNSDLARLQ----------KAFPQGRTLDKDPCTIQEWNEG--KIPLLFA 114 +++ L L+ + G T + I +N + Sbjct: 1058 GGHRVLIFSQMTKMLDLLEDFLEHEGYKYERIDGGITGNMRQEAIDRFNAPGAQQFCFLL 1117 Query: 115 HPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQN 174 + G G+NL + ++ + W+ Q +R + G + V +Y + + Sbjct: 1118 STRAGGLGINL-ATADTVIIYDSDWNPHNDIQA-----FSRAHRIGQNKKVMIYRFVTRA 1171 Query: 175 TIDELVLQRLRTKSTI 190 +++E + Q + K + Sbjct: 1172 SVEERITQVAKKKMML 1187 >gi|71663704|ref|XP_818842.1| hypothetical protein [Trypanosoma cruzi strain CL Brener] gi|70884114|gb|EAN96991.1| hypothetical protein, conserved [Trypanosoma cruzi] Length = 1455 Score = 84.6 bits (208), Expect = 7e-15, Method: Composition-based stats. Identities = 27/146 (18%), Positives = 58/146 (39%), Gaps = 18/146 (12%) Query: 62 IIEKANAAPIIVAYHFNSDLARLQKAFPQGRTL----------DKDPCTIQEW-NEGKIP 110 IIE+ + +++ + S L L++ + L I+ + + I Sbjct: 483 IIEELHEK-VVLFSTYRSHLFLLKQLLRKRGLLADVMHGGLDVKDRQRIIERFTEDASIS 541 Query: 111 LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYL 170 +L + G G+NL N + F + W+ + Q R+ + G +R V VY + Sbjct: 542 VLLCSTKASGVGINL-VAANHCILFDVSWNPADDTQATYRL-----YRYGQQRPVTVYRI 595 Query: 171 IAQNTIDELVLQRLRTKSTIQDLLLN 196 T + +V +K+ + +++ Sbjct: 596 ATDGTFEHVVFFYALSKTWLHKKIVD 621 >gi|331088936|ref|ZP_08337845.1| hypothetical protein HMPREF1025_01428 [Lachnospiraceae bacterium 3_1_46FAA] gi|330406534|gb|EGG86042.1| hypothetical protein HMPREF1025_01428 [Lachnospiraceae bacterium 3_1_46FAA] Length = 557 Score = 84.6 bits (208), Expect = 7e-15, Method: Composition-based stats. Identities = 36/207 (17%), Positives = 74/207 (35%), Gaps = 28/207 (13%) Query: 3 QYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVI 62 Y ++ + L+ + +++ N S T++ QL G D K+ ++ + Sbjct: 350 LYRDIKQGIVEQLE-DILQSVNPLSCTLRLRQLTGGLFTEDNP---------KLDRIKDM 399 Query: 63 IEKA---NAAPIIVAYHFNSD----LARLQKAFP-----QGRTLDKDPCTIQEWNEGKIP 110 +E+ N I+ + S L L+ P + ++ + + + Sbjct: 400 LEEEIIPNGNKAIIFSQWESITSVYLEALRAYNPIYITGKVTPEERQKEVDRFQTDPECK 459 Query: 111 LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYL 170 L + G GL L + LW E Q R + G V V + Sbjct: 460 LAIGTIGAMGTGLTLNKASYVFFVDKLWNSGENAQ------AEDRAHRIGTAGTVNVISM 513 Query: 171 IAQNTIDELVLQRLRTKSTIQDLLLNA 197 +A+ ++DE V + L + D +++ Sbjct: 514 VAKGSVDEGVEEYLLENKELFDRVVDG 540 >gi|328771548|gb|EGF81588.1| hypothetical protein BATDEDRAFT_183 [Batrachochytrium dendrobatidis JAM81] Length = 1186 Score = 84.6 bits (208), Expect = 7e-15, Method: Composition-based stats. Identities = 30/159 (18%), Positives = 63/159 (39%), Gaps = 20/159 (12%) Query: 55 KIKALEVIIEK--ANAAPIIVAYHFNSDLARLQ---------KAFPQGRTLDKDPC-TIQ 102 K + L+ I+ K + I++ + + ++ G T ++ ++ Sbjct: 712 KFELLDRILPKFKVSGHRILMFFQMTQVMDIMEDYLRWRGHIYLRLDGHTKPEERTVMLK 771 Query: 103 EWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 +N P + + G GLNLQ + ++ + W+ + Q R + G Sbjct: 772 TFNRPDDPPFIFLLSTRAGGLGLNLQT-ADTVIIYDSDWNPHQDLQA-----QDRAHRIG 825 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 K+ V + LI +++E +L R + K I ++ A K Sbjct: 826 QKKEVRILRLITSKSVEETILARAQYKLDIDGKVIQAGK 864 >gi|301773764|ref|XP_002922290.1| PREDICTED: LOW QUALITY PROTEIN: chromodomain-helicase-DNA-binding protein 4-like [Ailuropoda melanoleuca] Length = 1906 Score = 84.6 bits (208), Expect = 7e-15, Method: Composition-based stats. Identities = 19/136 (13%), Positives = 46/136 (33%), Gaps = 18/136 (13%) Query: 67 NAAPIIVAYHFNSDLARLQ----------KAFPQGRTLDKDPCTIQEWNEG--KIPLLFA 114 +++ L L+ + G T + I +N + Sbjct: 1059 GGHRVLIFSQMTKMLDLLEDFLEHEGYKYERIDGGITGNMRQEAIDRFNAPGAQQFCFLL 1118 Query: 115 HPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQN 174 + G G+NL + ++ + W+ Q +R + G + V +Y + + Sbjct: 1119 STRAGGLGINL-ATADTVIIYDSDWNPHNDIQA-----FSRAHRIGQNKKVMIYRFVTRA 1172 Query: 175 TIDELVLQRLRTKSTI 190 +++E + Q + K + Sbjct: 1173 SVEERITQVAKKKMML 1188 >gi|301752864|ref|XP_002912282.1| PREDICTED: chromodomain-helicase-DNA-binding protein 9-like [Ailuropoda melanoleuca] Length = 2885 Score = 84.6 bits (208), Expect = 7e-15, Method: Composition-based stats. Identities = 25/146 (17%), Positives = 51/146 (34%), Gaps = 18/146 (12%) Query: 65 KANAAPIIVAYHFNSDLARLQKAFPQGRTL----------DKDPCTIQEWNEGKIP--LL 112 KA +++ L L+ R L + I +++ + Sbjct: 1197 KAGGHKVLIFSQMVRCLDILEDYLIHKRYLYERIDGRVRGNLRQAAIDRFSKPDSDRFVF 1256 Query: 113 FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIA 172 + G G+NL + + F W+ + Q R + G +AV VY L+ Sbjct: 1257 LLCTRAGGLGINLT-AADTCIIFDSDWNPQNDLQAQARC-----HRIGQNKAVKVYRLVT 1310 Query: 173 QNTIDELVLQRLRTKSTIQDLLLNAL 198 +N+ + + R K + +L ++ Sbjct: 1311 RNSYEREMFDRASLKLGLDKAVLQSM 1336 >gi|297690951|ref|XP_002822857.1| PREDICTED: LOW QUALITY PROTEIN: chromodomain-helicase-DNA-binding protein 4-like [Pongo abelii] Length = 1879 Score = 84.6 bits (208), Expect = 7e-15, Method: Composition-based stats. Identities = 19/136 (13%), Positives = 46/136 (33%), Gaps = 18/136 (13%) Query: 67 NAAPIIVAYHFNSDLARLQ----------KAFPQGRTLDKDPCTIQEWNEG--KIPLLFA 114 +++ L L+ + G T + I +N + Sbjct: 1047 GGHRVLIFSQMTKMLDLLEDFLEHEGYKYERIDGGITGNMRQEAIDRFNAPGAQQFCFLL 1106 Query: 115 HPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQN 174 + G G+NL + ++ + W+ Q +R + G + V +Y + + Sbjct: 1107 STRAGGLGINL-ATADTVIIYDSDWNPHNDIQA-----FSRAHRIGQNKKVMIYRFVTRA 1160 Query: 175 TIDELVLQRLRTKSTI 190 +++E + Q + K + Sbjct: 1161 SVEERITQVAKKKMML 1176 >gi|296231077|ref|XP_002807783.1| PREDICTED: LOW QUALITY PROTEIN: chromodomain-helicase-DNA-binding protein 9-like [Callithrix jacchus] Length = 2896 Score = 84.6 bits (208), Expect = 7e-15, Method: Composition-based stats. Identities = 25/146 (17%), Positives = 51/146 (34%), Gaps = 18/146 (12%) Query: 65 KANAAPIIVAYHFNSDLARLQKAFPQGRTL----------DKDPCTIQEWNEGKIP--LL 112 KA +++ L L+ R L + I +++ + Sbjct: 1195 KAGGHKVLIFSQMVRCLDILEDYLIHKRYLYERIDGRVRGNLRQAAIDRFSKPDSDRFVF 1254 Query: 113 FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIA 172 + G G+NL + + F W+ + Q R + G +AV VY L+ Sbjct: 1255 LLCTRAGGLGINLT-AADTCIIFDSDWNPQNDLQAQARC-----HRIGQNKAVKVYRLVT 1308 Query: 173 QNTIDELVLQRLRTKSTIQDLLLNAL 198 +N+ + + R K + +L ++ Sbjct: 1309 RNSYEREMFDRASLKLGLDKAVLQSM 1334 >gi|51599156|ref|NP_001264.2| chromodomain-helicase-DNA-binding protein 4 [Homo sapiens] gi|311033360|sp|Q14839|CHD4_HUMAN RecName: Full=Chromodomain-helicase-DNA-binding protein 4; Short=CHD-4; AltName: Full=ATP-dependent helicase CHD4; AltName: Full=Mi-2 autoantigen 218 kDa protein; AltName: Full=Mi2-beta Length = 1912 Score = 84.6 bits (208), Expect = 7e-15, Method: Composition-based stats. Identities = 19/136 (13%), Positives = 46/136 (33%), Gaps = 18/136 (13%) Query: 67 NAAPIIVAYHFNSDLARLQ----------KAFPQGRTLDKDPCTIQEWNEG--KIPLLFA 114 +++ L L+ + G T + I +N + Sbjct: 1065 GGHRVLIFSQMTKMLDLLEDFLEHEGYKYERIDGGITGNMRQEAIDRFNAPGAQQFCFLL 1124 Query: 115 HPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQN 174 + G G+NL + ++ + W+ Q +R + G + V +Y + + Sbjct: 1125 STRAGGLGINL-ATADTVIIYDSDWNPHNDIQA-----FSRAHRIGQNKKVMIYRFVTRA 1178 Query: 175 TIDELVLQRLRTKSTI 190 +++E + Q + K + Sbjct: 1179 SVEERITQVAKKKMML 1194 >gi|1107696|emb|CAA60384.1| Mi-2 protein [Homo sapiens] gi|119609184|gb|EAW88778.1| chromodomain helicase DNA binding protein 4, isoform CRA_b [Homo sapiens] Length = 1912 Score = 84.6 bits (208), Expect = 7e-15, Method: Composition-based stats. Identities = 19/136 (13%), Positives = 46/136 (33%), Gaps = 18/136 (13%) Query: 67 NAAPIIVAYHFNSDLARLQ----------KAFPQGRTLDKDPCTIQEWNEG--KIPLLFA 114 +++ L L+ + G T + I +N + Sbjct: 1065 GGHRVLIFSQMTKMLDLLEDFLEHEGYKYERIDGGITGNMRQEAIDRFNAPGAQQFCFLL 1124 Query: 115 HPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQN 174 + G G+NL + ++ + W+ Q +R + G + V +Y + + Sbjct: 1125 STRAGGLGINL-ATADTVIIYDSDWNPHNDIQA-----FSRAHRIGQNKKVMIYRFVTRA 1178 Query: 175 TIDELVLQRLRTKSTI 190 +++E + Q + K + Sbjct: 1179 SVEERITQVAKKKMML 1194 >gi|291392737|ref|XP_002712922.1| PREDICTED: chromodomain helicase DNA binding protein 4-like isoform 1 [Oryctolagus cuniculus] Length = 1905 Score = 84.6 bits (208), Expect = 7e-15, Method: Composition-based stats. Identities = 19/136 (13%), Positives = 46/136 (33%), Gaps = 18/136 (13%) Query: 67 NAAPIIVAYHFNSDLARLQ----------KAFPQGRTLDKDPCTIQEWNEG--KIPLLFA 114 +++ L L+ + G T + I +N + Sbjct: 1058 GGHRVLIFSQMTKMLDLLEDFLEHEGYKYERIDGGITGNMRQEAIDRFNAPGAQQFCFLL 1117 Query: 115 HPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQN 174 + G G+NL + ++ + W+ Q +R + G + V +Y + + Sbjct: 1118 STRAGGLGINL-ATADTVIIYDSDWNPHNDIQA-----FSRAHRIGQNKKVMIYRFVTRA 1171 Query: 175 TIDELVLQRLRTKSTI 190 +++E + Q + K + Sbjct: 1172 SVEERITQVAKKKMML 1187 >gi|255519616|dbj|BAA86436.2| KIAA1122 protein [Homo sapiens] Length = 1040 Score = 84.6 bits (208), Expect = 7e-15, Method: Composition-based stats. Identities = 30/157 (19%), Positives = 62/157 (39%), Gaps = 19/157 (12%) Query: 51 VHDEKIKALEVIIEKAN--AAPIIVAYHFNSDLARL---------QKAFPQGRT-LDKDP 98 + K + L I+ + +++ F L L + G+T + + Sbjct: 865 LDSGKFRVLGCILSELKQKGDRVVLFSQFTMMLDILEVLLKHHQHRYLRLDGKTQISERI 924 Query: 99 CTIQEWNEG-KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 I E+N I + + G G+NL N+++ + + +Q +R Sbjct: 925 HLIDEFNTDMDIFVFLLSTKAGGLGINLT-SANVVILHDIDCNPYNDKQAEDRC-----H 978 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 + G + V V LI+Q TI+E +L+ + K ++ + Sbjct: 979 RVGQTKEVLVIKLISQGTIEESMLKINQQKLKLEQDM 1015 >gi|45384232|ref|NP_990390.1| BRG1 protein [Gallus gallus] gi|996018|emb|CAA62831.1| BRG1 protein [Gallus gallus] Length = 1630 Score = 84.6 bits (208), Expect = 7e-15, Method: Composition-based stats. Identities = 30/160 (18%), Positives = 62/160 (38%), Gaps = 20/160 (12%) Query: 52 HDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAF---------PQGRTLDKDPCT 100 K + L+ I+ +A +++ S + ++ F G T +D Sbjct: 1075 ASGKFELLDRILPKLRATNHKVLLFCQMTSLMTIMEDYFAYRGFKYLRLDGTTKAEDRGM 1134 Query: 101 I-QEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 + + +NE + + + G GLNLQ + ++ F W+ + Q R Sbjct: 1135 LLKTFNEPGSEYFIFLLSTRAGGLGLNLQ-SADTVIIFDSDWNPHQDLQA-----QDRAH 1188 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + G + V V L N+++E +L + K + ++ A Sbjct: 1189 RIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQA 1228 >gi|291392739|ref|XP_002712923.1| PREDICTED: chromodomain helicase DNA binding protein 4-like isoform 2 [Oryctolagus cuniculus] Length = 1912 Score = 84.6 bits (208), Expect = 7e-15, Method: Composition-based stats. Identities = 19/136 (13%), Positives = 46/136 (33%), Gaps = 18/136 (13%) Query: 67 NAAPIIVAYHFNSDLARLQ----------KAFPQGRTLDKDPCTIQEWNEG--KIPLLFA 114 +++ L L+ + G T + I +N + Sbjct: 1065 GGHRVLIFSQMTKMLDLLEDFLEHEGYKYERIDGGITGNMRQEAIDRFNAPGAQQFCFLL 1124 Query: 115 HPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQN 174 + G G+NL + ++ + W+ Q +R + G + V +Y + + Sbjct: 1125 STRAGGLGINL-ATADTVIIYDSDWNPHNDIQA-----FSRAHRIGQNKKVMIYRFVTRA 1178 Query: 175 TIDELVLQRLRTKSTI 190 +++E + Q + K + Sbjct: 1179 SVEERITQVAKKKMML 1194 >gi|50866|emb|CAA49560.1| enhancer-trap-locus-1 [Mus musculus] Length = 1136 Score = 84.6 bits (208), Expect = 7e-15, Method: Composition-based stats. Identities = 27/139 (19%), Positives = 55/139 (39%), Gaps = 17/139 (12%) Query: 67 NAAPIIVAYHFNSDLARL---------QKAFPQGRT-LDKDPCTIQEWNEG-KIPLLFAH 115 +++ F L L + G+T + + I E+N I + Sbjct: 979 KGDRVVLFSQFTMMLDILEVLLKHHQHRYLRLDGKTQISERIHLIDEFNTDMDIFVFLLS 1038 Query: 116 PASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNT 175 + G G+NL N+++ + + +Q +R + G + V V LI+Q T Sbjct: 1039 TKAGGLGINLT-SANVVILHDIDCNPYNDKQAEDRC-----HRVGQTKEVLVIKLISQGT 1092 Query: 176 IDELVLQRLRTKSTIQDLL 194 I+E +L+ + K ++ + Sbjct: 1093 IEESMLKINQQKLKLEQDM 1111 >gi|307564877|ref|ZP_07627402.1| SNF2 family N-terminal domain protein [Prevotella amnii CRIS 21A-A] gi|307346413|gb|EFN91725.1| SNF2 family N-terminal domain protein [Prevotella amnii CRIS 21A-A] Length = 477 Score = 84.6 bits (208), Expect = 7e-15, Method: Composition-based stats. Identities = 32/152 (21%), Positives = 57/152 (37%), Gaps = 15/152 (9%) Query: 55 KIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD------PCTIQEWNE 106 KI I + +IV + + L K FP+ T+ + + Sbjct: 311 KIAQAIDFISTFLESGKKLIVFCSLHEIVDELCKTFPKAVTVTGRDSAVNKQAAVDAFQT 370 Query: 107 GKIPLLFA-HPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 G+ L + G GL L + + F L W + + Q +R + G V Sbjct: 371 GENTRLIICSIKAAGVGLTLTAASD-VAFCELPWTMADCCQCEDR-----AHRIGQNDNV 424 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 YYL+ + TID + ++ K +I ++N+ Sbjct: 425 NCYYLLGRGTIDNTIYSLIQRKKSIAKEIMNS 456 >gi|302679614|ref|XP_003029489.1| hypothetical protein SCHCODRAFT_111676 [Schizophyllum commune H4-8] gi|300103179|gb|EFI94586.1| hypothetical protein SCHCODRAFT_111676 [Schizophyllum commune H4-8] Length = 1059 Score = 84.6 bits (208), Expect = 7e-15, Method: Composition-based stats. Identities = 35/142 (24%), Positives = 53/142 (37%), Gaps = 17/142 (11%) Query: 56 IKALEVIIEKANAAPIIVAYHFNSDLARL-----QKAFPQGRTLD-----KDPCTIQEWN 105 + L I + ++ H+ S L L +K + R K + ++N Sbjct: 730 VSKLLKYIYEHTDEKVVFVSHYTSSLNILSAYCDRKRYKYNRLDGNTPPAKRQEYVNQFN 789 Query: 106 EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 + F S G G+NL G + L+ F W+ Q R + G KR V Sbjct: 790 KSTQRSNFIFLLS-GVGINLT-GASRLILFDCDWNPSYDLQSAARC-----HRDGQKRPV 842 Query: 166 FVYYLIAQNTIDELVLQRLRTK 187 VY + IDE + QR TK Sbjct: 843 HVYRFMTAGLIDEKIYQRQVTK 864 >gi|195428619|ref|XP_002062369.1| GK17504 [Drosophila willistoni] gi|194158454|gb|EDW73355.1| GK17504 [Drosophila willistoni] Length = 2023 Score = 84.6 bits (208), Expect = 7e-15, Method: Composition-based stats. Identities = 22/150 (14%), Positives = 54/150 (36%), Gaps = 20/150 (13%) Query: 55 KIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFP----QGRTLDK------DPCTIQ 102 K+ L ++++ + +++ L L+ + +D I Sbjct: 1064 KLVLLSKMLKQLKSQNHRVLIFSQMTKMLDILEDFLEGEQYKYERIDGSITGAVRQEAID 1123 Query: 103 EWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 +N + + + G G+NL + ++ + W+ Q +R + G Sbjct: 1124 RFNAPGAQQFVFLLSTRAGGLGINL-ATADTVIIYDSDWNPHNDIQA-----FSRAHRIG 1177 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 V +Y + +N+++E V Q + K + Sbjct: 1178 QANKVMIYRFVTRNSVEERVTQVAKRKMML 1207 >gi|71891786|dbj|BAA20767.3| KIAA0308 [Homo sapiens] Length = 2759 Score = 84.6 bits (208), Expect = 7e-15, Method: Composition-based stats. Identities = 25/146 (17%), Positives = 51/146 (34%), Gaps = 18/146 (12%) Query: 65 KANAAPIIVAYHFNSDLARLQKAFPQGRTL----------DKDPCTIQEWNEGKIP--LL 112 KA +++ L L+ R L + I +++ + Sbjct: 1072 KAGGHKVLIFSQMVRCLDILEDYLIHKRYLYERIDGRVRGNLRQAAIDRFSKPDSDRFVF 1131 Query: 113 FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIA 172 + G G+NL + + F W+ + Q R + G +AV VY L+ Sbjct: 1132 LLCTRAGGLGINLT-AADTCIIFDSDWNPQNDLQAQARC-----HRIGQNKAVKVYRLVT 1185 Query: 173 QNTIDELVLQRLRTKSTIQDLLLNAL 198 +N+ + + R K + +L ++ Sbjct: 1186 RNSYEREMFDRASLKLGLDKAVLQSM 1211 >gi|328869121|gb|EGG17499.1| SNF2-related domain-containing protein [Dictyostelium fasciculatum] Length = 1301 Score = 84.6 bits (208), Expect = 7e-15, Method: Composition-based stats. Identities = 29/150 (19%), Positives = 50/150 (33%), Gaps = 19/150 (12%) Query: 67 NAAPIIVAYHFNSDLARLQKAFPQ------------GRTLDKDPCTIQEWNEGKIPLLFA 114 I++ L +Q T ++ + N+ Sbjct: 866 EGHRILIFSQSVKMLNAIQLLLDTLNLSYLRIDGSITSTKERQKRIDEYNNDSSYFCFLL 925 Query: 115 HPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQN 174 GLNL +L+ F W ++ V R + G KR V VY LI Sbjct: 926 TIQVGALGLNLTSADRVLI-FDPSWT------TVDNQAVDRVYRIGQKRDVVVYRLITCG 978 Query: 175 TIDELVLQRLRTKSTIQDLLLNALKKETIH 204 TI+E + ++ K ++ +LN K + + Sbjct: 979 TIEEKIYRKQVFKGSLMKSMLNQDKGQHRY 1008 >gi|327355372|gb|EGE84229.1| DNA excision repair protein [Ajellomyces dermatitidis ATCC 18188] Length = 1026 Score = 84.6 bits (208), Expect = 7e-15, Method: Composition-based stats. Identities = 29/138 (21%), Positives = 48/138 (34%), Gaps = 17/138 (12%) Query: 66 ANAAPIIVAYHFNSDLARLQKAFP----------QGRTLDKDPCTIQEWN-EGKIPLLFA 114 N ++V H L LQ F + D + +N + + + Sbjct: 628 GNGDKVLVFSHSVRLLKMLQMLFKHTSYNVSYLDGAMSYDDRTKAVDSFNADPREFVFLI 687 Query: 115 HPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQN 174 + G GLN+ N +V W+ Q R + G R V V+ L++ Sbjct: 688 STRAGGVGLNIT-SANKVVVVDPNWNPAYDLQA-----QDRAYRIGQSRDVEVFRLVSAG 741 Query: 175 TIDELVLQRLRTKSTIQD 192 TI+E+V R K + Sbjct: 742 TIEEIVYARQIYKQQQAN 759 >gi|296189487|ref|XP_002742800.1| PREDICTED: hypothetical protein LOC100415645 [Callithrix jacchus] Length = 1546 Score = 84.6 bits (208), Expect = 7e-15, Method: Composition-based stats. Identities = 33/152 (21%), Positives = 61/152 (40%), Gaps = 19/152 (12%) Query: 53 DEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQK---------AFPQGRTLDKDP-CT 100 K+K L+ ++ + N +++ L LQ+ G T ++ Sbjct: 506 SGKMKVLQQLLNHCRKNRDKVLLFSFSTKLLDVLQQYCMASGLDYRRLDGSTKSEERLKI 565 Query: 101 IQEWNE-GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQA 159 ++E+N + + + G GLN G N++V F W+ Q I+R + Sbjct: 566 VKEFNSTQDVNICLVSTMAGGLGLNF-IGANVVVLFDPTWNPANDLQAIDR-----AYRI 619 Query: 160 GFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQ 191 G R V V LI+ T++E++ R K + Sbjct: 620 GQCRDVKVLRLISLGTVEEIMYLRQVYKQQLH 651 >gi|149020473|gb|EDL78278.1| SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, isoform CRA_b [Rattus norvegicus] Length = 1614 Score = 84.6 bits (208), Expect = 7e-15, Method: Composition-based stats. Identities = 30/160 (18%), Positives = 62/160 (38%), Gaps = 20/160 (12%) Query: 52 HDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAF---------PQGRTLDKDPCT 100 K + L+ I+ +A +++ S + ++ F G T +D Sbjct: 1078 ASGKFELLDRILPKLRATNHKVLLFCQMTSLMTIMEDYFAYRGFKYLRLDGTTKAEDRGM 1137 Query: 101 I-QEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 + + +NE + + + G GLNLQ + ++ F W+ + Q R Sbjct: 1138 LLKTFNEPGSEYFIFLLSTRAGGLGLNLQ-SADTVIIFDSDWNPHQDLQA-----QDRAH 1191 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + G + V V L N+++E +L + K + ++ A Sbjct: 1192 RIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQA 1231 >gi|156717248|ref|NP_001096166.1| chromodomain helicase DNA binding protein 4 [Xenopus (Silurana) tropicalis] gi|126631946|gb|AAI33720.1| chd4 protein [Xenopus (Silurana) tropicalis] Length = 1888 Score = 84.6 bits (208), Expect = 7e-15, Method: Composition-based stats. Identities = 23/150 (15%), Positives = 54/150 (36%), Gaps = 20/150 (13%) Query: 55 KIKALEVIIEKA--NAAPIIVAYHFNSDLARLQ----------KAFPQGRTLDKDPCTIQ 102 K+ L+ ++ K + +++ L L+ + G T + I Sbjct: 1041 KLLLLQKMLRKLKDDGHRVLIFSQMTKMLDLLEDFLEHEGYKYERIDGGITGNMRQEAID 1100 Query: 103 EWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 +N + + G G+NL + +V + W+ Q +R + G Sbjct: 1101 RFNAPGAQQFCFLLSTRAGGLGINL-ATADTVVIYDSDWNPHNDIQA-----FSRAHRIG 1154 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 + V +Y + + +++E + Q + K + Sbjct: 1155 QNKKVMIYRFVTRASVEERITQVAKKKMML 1184 >gi|73986638|ref|XP_867851.1| PREDICTED: similar to SWI/SNF-related matrix-associated actin-dependent regulator of chromatin a4 isoform 22 [Canis familiaris] Length = 1643 Score = 84.6 bits (208), Expect = 7e-15, Method: Composition-based stats. Identities = 30/160 (18%), Positives = 62/160 (38%), Gaps = 20/160 (12%) Query: 52 HDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAF---------PQGRTLDKDPCT 100 K + L+ I+ +A +++ S + ++ F G T +D Sbjct: 1078 ASGKFELLDRILPKLRATNHKVLLFCQMTSLMTIMEDYFAYRGFKYLRLDGTTKAEDRGM 1137 Query: 101 I-QEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 + + +NE + + + G GLNLQ + ++ F W+ + Q R Sbjct: 1138 LLKTFNEPGSEYFIFLLSTRAGGLGLNLQ-SADTVIIFDSDWNPHQDLQA-----QDRAH 1191 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + G + V V L N+++E +L + K + ++ A Sbjct: 1192 RIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQA 1231 >gi|81914599|sp|Q8K1P7|SMCA4_RAT RecName: Full=Transcription activator BRG1; AltName: Full=ATP-dependent helicase SMARCA4; AltName: Full=BRG1-associated factor 190A; Short=BAF190A; AltName: Full=Protein brahma homolog 1; AltName: Full=SNF2-beta; AltName: Full=SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 4 gi|22095171|emb|CAD43278.1| brahma-related protein 1 [Rattus norvegicus] Length = 1613 Score = 84.6 bits (208), Expect = 7e-15, Method: Composition-based stats. Identities = 30/160 (18%), Positives = 62/160 (38%), Gaps = 20/160 (12%) Query: 52 HDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAF---------PQGRTLDKDPCT 100 K + L+ I+ +A +++ S + ++ F G T +D Sbjct: 1078 ASGKFELLDRILPKLRATNHKVLLFCQMTSLMTIMEDYFAYRGFKYLRLDGTTKAEDRGM 1137 Query: 101 I-QEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 + + +NE + + + G GLNLQ + ++ F W+ + Q R Sbjct: 1138 LLKTFNEPGSEYFIFLLSTRAGGLGLNLQ-SADTVIIFDSDWNPHQDLQA-----QDRAH 1191 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + G + V V L N+++E +L + K + ++ A Sbjct: 1192 RIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQA 1231 >gi|311256289|ref|XP_003126577.1| PREDICTED: chromodomain-helicase-DNA-binding protein 4-like [Sus scrofa] Length = 1912 Score = 84.6 bits (208), Expect = 7e-15, Method: Composition-based stats. Identities = 19/136 (13%), Positives = 46/136 (33%), Gaps = 18/136 (13%) Query: 67 NAAPIIVAYHFNSDLARLQ----------KAFPQGRTLDKDPCTIQEWNEG--KIPLLFA 114 +++ L L+ + G T + I +N + Sbjct: 1065 GGHRVLIFSQMTKMLDLLEDFLEHEGYKYERIDGGITGNMRQEAIDRFNAPGAQQFCFLL 1124 Query: 115 HPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQN 174 + G G+NL + ++ + W+ Q +R + G + V +Y + + Sbjct: 1125 STRAGGLGINL-ATADTVIIYDSDWNPHNDIQA-----FSRAHRIGQNKKVMIYRFVTRA 1178 Query: 175 TIDELVLQRLRTKSTI 190 +++E + Q + K + Sbjct: 1179 SVEERITQVAKKKMML 1194 >gi|281346617|gb|EFB22201.1| hypothetical protein PANDA_000001 [Ailuropoda melanoleuca] Length = 2901 Score = 84.6 bits (208), Expect = 7e-15, Method: Composition-based stats. Identities = 25/146 (17%), Positives = 51/146 (34%), Gaps = 18/146 (12%) Query: 65 KANAAPIIVAYHFNSDLARLQKAFPQGRTL----------DKDPCTIQEWNEGKIP--LL 112 KA +++ L L+ R L + I +++ + Sbjct: 1197 KAGGHKVLIFSQMVRCLDILEDYLIHKRYLYERIDGRVRGNLRQAAIDRFSKPDSDRFVF 1256 Query: 113 FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIA 172 + G G+NL + + F W+ + Q R + G +AV VY L+ Sbjct: 1257 LLCTRAGGLGINLT-AADTCIIFDSDWNPQNDLQAQARC-----HRIGQNKAVKVYRLVT 1310 Query: 173 QNTIDELVLQRLRTKSTIQDLLLNAL 198 +N+ + + R K + +L ++ Sbjct: 1311 RNSYEREMFDRASLKLGLDKAVLQSM 1336 >gi|194375514|dbj|BAG56702.1| unnamed protein product [Homo sapiens] Length = 616 Score = 84.6 bits (208), Expect = 7e-15, Method: Composition-based stats. Identities = 24/158 (15%), Positives = 62/158 (39%), Gaps = 18/158 (11%) Query: 52 HDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAFP---------QGRTLDKDPC- 99 K+ L+ ++ + +++ L LQ G ++ Sbjct: 64 ASGKLHLLDKLLAFLYSGGHRVLLFSQMTQMLDILQDYMDYRGYSYERVDGSVRGEERHL 123 Query: 100 TIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQA 159 I+ + + I + + G G+NL + ++F ++ + Q R + Sbjct: 124 AIKNFGQQPIFVFLLSTRAGGVGMNLT-AADTVIFVDSDFNPQNDLQAAAR-----AHRI 177 Query: 160 GFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 G ++V V LI ++T++E+V ++ +K + ++++ Sbjct: 178 GQNKSVKVIRLIGRDTVEEIVYRKAASKLQLTNMIIEG 215 >gi|47211680|emb|CAF92844.1| unnamed protein product [Tetraodon nigroviridis] Length = 295 Score = 84.6 bits (208), Expect = 7e-15, Method: Composition-based stats. Identities = 25/123 (20%), Positives = 46/123 (37%), Gaps = 31/123 (25%) Query: 98 PCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 ++ W + + + G GLNL G N LV F W+ +Q + R+ Sbjct: 84 ASPLRLWQSPE-FIFMLSSKAGGCGLNL-IGANRLVMFDPDWNPANDEQAMARVW----- 136 Query: 158 QAGFKRAVFVYYLIA------------------------QNTIDELVLQRLRTKSTIQDL 193 + G ++ ++Y L+A TI+E +LQR K + Sbjct: 137 RDGQRKTCYIYRLLAVRAAQTRCRRRRCAAVTGVCVCPQTGTIEEKILQRQAHKKALSSC 196 Query: 194 LLN 196 +++ Sbjct: 197 VVD 199 >gi|194211609|ref|XP_001496418.2| PREDICTED: chromodomain helicase DNA binding protein 4 [Equus caballus] Length = 1912 Score = 84.6 bits (208), Expect = 7e-15, Method: Composition-based stats. Identities = 19/136 (13%), Positives = 46/136 (33%), Gaps = 18/136 (13%) Query: 67 NAAPIIVAYHFNSDLARLQ----------KAFPQGRTLDKDPCTIQEWNEG--KIPLLFA 114 +++ L L+ + G T + I +N + Sbjct: 1065 GGHRVLIFSQMTKMLDLLEDFLEHEGYKYERIDGGITGNMRQEAIDRFNAPGAQQFCFLL 1124 Query: 115 HPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQN 174 + G G+NL + ++ + W+ Q +R + G + V +Y + + Sbjct: 1125 STRAGGLGINL-ATADTVIIYDSDWNPHNDIQA-----FSRAHRIGQNKKVMIYRFVTRA 1178 Query: 175 TIDELVLQRLRTKSTI 190 +++E + Q + K + Sbjct: 1179 SVEERITQVAKKKMML 1194 >gi|328773732|gb|EGF83769.1| hypothetical protein BATDEDRAFT_85620 [Batrachochytrium dendrobatidis JAM81] Length = 1065 Score = 84.6 bits (208), Expect = 7e-15, Method: Composition-based stats. Identities = 29/205 (14%), Positives = 69/205 (33%), Gaps = 26/205 (12%) Query: 7 FQRELYCDLQGENI--EAFNSASKTVKCLQLANGAVYYDEE---KHWKEVHDEKIKALEV 61 R+ + + I N+ + + + + ++ + K + +K+ L Sbjct: 846 MCRQSCAESELMKILETQQNANATSPRLFASKDAPLHAGSTIRLQSIKSIPSKKLNTLTN 905 Query: 62 ----IIEKANAAPIIVAYHFNSDLARLQ----------KAFPQGRTLDKDPCTIQEWNEG 107 + + +V + L ++ + + + Sbjct: 906 DLLTLQKSDPKIKSVVFSQWTRMLDLVEISMREHGINFVRMDGSLSQKNREKVLHTFKTD 965 Query: 108 K-IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVF 166 + +L A S G GLNL + + WW+ Q I+R+ + G + V Sbjct: 966 DTVTVLLATLRSTGVGLNLTV-ASCVFMLDPWWNESVEFQAIDRV-----HRIGQNKPVT 1019 Query: 167 VYYLIAQNTIDELVLQRLRTKSTIQ 191 V I +N+++E +L+ K+ + Sbjct: 1020 VTRYIMRNSVEEKMLEIQHRKAQLA 1044 >gi|327300653|ref|XP_003235019.1| SNF2 family helicase [Trichophyton rubrum CBS 118892] gi|326462371|gb|EGD87824.1| SNF2 family helicase [Trichophyton rubrum CBS 118892] Length = 920 Score = 84.6 bits (208), Expect = 7e-15, Method: Composition-based stats. Identities = 35/182 (19%), Positives = 71/182 (39%), Gaps = 24/182 (13%) Query: 27 SKTVKCLQLANGAVYYDEEKHWKEV----HDEKIKALEVIIEK---ANAAPIIVAYHFNS 79 ++ C +L + A + E+ + +V KI+AL I+ A +V + S Sbjct: 717 AEIKDCSELVSPAAEFGEDCNQVDVESDSSSSKIQALVKILTAKGQATGTKTVVFSQWTS 776 Query: 80 DLARLQKAFP-----------QGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYG 128 L ++ + + +D + + + ++ A C GLNL Sbjct: 777 FLDLIEPHLVLYNINFARIDGKMNSAKRDAAMGKFSRDSECTVMLASLNVCSVGLNL-VA 835 Query: 129 GNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKS 188 N +V WW Q ++R+ + G R ++ L+ +N+I++ VL + K Sbjct: 836 ANQVVLADSWWAPAIEDQAVDRV-----YRLGQTRPTTIWRLVMENSIEDRVLDIQKEKR 890 Query: 189 TI 190 + Sbjct: 891 EL 892 >gi|290343601|ref|YP_003494968.1| hypothetical protein OTV1_129 [Ostreococcus tauri virus 1] gi|260161016|emb|CAY39717.1| hypothetical protein OTV1_129 [Ostreococcus tauri virus 1] Length = 483 Score = 84.6 bits (208), Expect = 7e-15, Method: Composition-based stats. Identities = 34/162 (20%), Positives = 60/162 (37%), Gaps = 19/162 (11%) Query: 53 DEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAF--PQGRTLDKDPCTIQEWNEG--- 107 K++ L +I+ +V F ++ +Q+ P R P ++ Sbjct: 305 SNKMETLFRMIKSHPDEKTLVFCQFKGEMDYIQRNLECPTFRIDGSVPKEERDNQVNAFK 364 Query: 108 KIP---LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA 164 K P + S G GLNLQ + + W+ Q I R + G + Sbjct: 365 KAPPGAVFIIQIKSGGQGLNLQEATRVYI-TGPSWNPATELQAIGR-----AHRTGQSKP 418 Query: 165 VFVYYLIAQN-----TIDELVLQRLRTKSTIQDLLLNALKKE 201 V+V LI + +++E +L KS + +LN + E Sbjct: 419 VYVKKLIYKEGDAFISVEEEILALQGHKSIVCSKVLNDERIE 460 >gi|209954670|ref|NP_599195.1| transcription activator BRG1 [Rattus norvegicus] Length = 1613 Score = 84.6 bits (208), Expect = 7e-15, Method: Composition-based stats. Identities = 30/160 (18%), Positives = 62/160 (38%), Gaps = 20/160 (12%) Query: 52 HDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAF---------PQGRTLDKDPCT 100 K + L+ I+ +A +++ S + ++ F G T +D Sbjct: 1078 ASGKFELLDRILPKLRATNHKVLLFCQMTSLMTIMEDYFAYRGFKYLRLDGTTKAEDRGM 1137 Query: 101 I-QEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 + + +NE + + + G GLNLQ + ++ F W+ + Q R Sbjct: 1138 LLKTFNEPGSEYFIFLLSTRAGGLGLNLQ-SADTVIIFDSDWNPHQDLQA-----QDRAH 1191 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + G + V V L N+++E +L + K + ++ A Sbjct: 1192 RIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQA 1231 >gi|314055214|ref|YP_004063552.1| SNF2/helicase domain protein [Ostreococcus tauri virus 2] gi|313575105|emb|CBI70118.1| SNF2/helicase domain protein [Ostreococcus tauri virus 2] Length = 513 Score = 84.6 bits (208), Expect = 7e-15, Method: Composition-based stats. Identities = 31/162 (19%), Positives = 58/162 (35%), Gaps = 19/162 (11%) Query: 53 DEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAF--PQGRTLDKDPCTIQEWN----- 105 K++ L +I+ +V F ++ +Q+ P R P ++ Sbjct: 335 SNKMETLFNMIKAHPNEKTLVFCQFRGEMDYIQQNMECPTFRIDGSVPKDERDNQVIAFK 394 Query: 106 -EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA 164 + S G GLNLQ + + W+ Q + R + G + Sbjct: 395 KAPPGAVFIIQIKSGGQGLNLQEATRVYI-TGPSWNPATELQAVGR-----SHRTGQTKQ 448 Query: 165 VFVYYLIAQNT-----IDELVLQRLRTKSTIQDLLLNALKKE 201 V+V LI + T ++E ++ KS + +LN + E Sbjct: 449 VYVKKLIYKETDTFVSVEEEMMALQGHKSIVCSKVLNDERIE 490 >gi|290978132|ref|XP_002671790.1| predicted protein [Naegleria gruberi] gi|284085362|gb|EFC39046.1| predicted protein [Naegleria gruberi] Length = 1069 Score = 84.6 bits (208), Expect = 7e-15, Method: Composition-based stats. Identities = 25/142 (17%), Positives = 57/142 (40%), Gaps = 18/142 (12%) Query: 67 NAAPIIVAYHFNSDLARLQ---------KAFPQGRTLDK-DPCTIQEWNE--GKIPLLFA 114 + +++ L L+ G+T + + E+N+ + Sbjct: 515 QNSRVLIFTQMTRMLDILEDYCYLRNYEYCRIDGQTSSELREQHMDEFNKEGSSKFIFLL 574 Query: 115 HPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQN 174 + G G+NL + ++ + W+ + Q +R + G K+ V VY LI+++ Sbjct: 575 STRAGGLGINL-ATADTVIIYDSDWNPQADLQAQDRC-----HRIGQKKPVNVYRLISKD 628 Query: 175 TIDELVLQRLRTKSTIQDLLLN 196 +I+E + QR K + +++ Sbjct: 629 SIEEKIYQRAVKKLYLDAVVIQ 650 >gi|195489519|ref|XP_002092773.1| GE11484 [Drosophila yakuba] gi|194178874|gb|EDW92485.1| GE11484 [Drosophila yakuba] Length = 1671 Score = 84.6 bits (208), Expect = 7e-15, Method: Composition-based stats. Identities = 21/102 (20%), Positives = 43/102 (42%), Gaps = 7/102 (6%) Query: 96 KDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 + + E+N G + L + G+NL G N ++ F W+ Q + RI Sbjct: 1016 ERERLVNEFNANGNVKLFLISTRAGSLGINLT-GANRVIIFDASWNPCHDTQAVYRI--- 1071 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + G + FVY ++ +++ + R K + D +++ Sbjct: 1072 --YRYGQTKPCFVYRIVMDRCLEKKIYDRQIKKQGMSDRIVD 1111 >gi|114558336|ref|XP_001157822.1| PREDICTED: chromodomain helicase DNA binding protein 1-like isoform 4 [Pan troglodytes] Length = 692 Score = 84.6 bits (208), Expect = 7e-15, Method: Composition-based stats. Identities = 35/217 (16%), Positives = 79/217 (36%), Gaps = 35/217 (16%) Query: 1 MKQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDE--------EKHWKEVH 52 MK F+ E + ++ N S+ KC + +D H E Sbjct: 91 MKDLDAFENET-----AKKVKLQNILSQLRKC---VDHPYLFDGVEPEPFEVGDHLIE-A 141 Query: 53 DEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAFP---------QGRTLDKDPC-T 100 K+ L+ ++ + +++ L LQ G ++ Sbjct: 142 SGKLHLLDKLLAFLYSGGHRVLLFSQMTQMLDILQDYMDYRGYSYERVDGSVRGEERHLA 201 Query: 101 IQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 I+ + I + + G G+NL + ++F ++ + Q R + G Sbjct: 202 IKNFGRQPIFVFLLSTRAGGVGMNLT-AADTVIFVDSDFNPQNDLQAAAR-----AHRIG 255 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 ++V V LI ++T++E+V ++ +K + ++++ Sbjct: 256 QNKSVKVIRLIGRDTVEEIVYRKAASKLQLTNMIIEG 292 >gi|76253779|ref|NP_035547.2| transcription activator BRG1 isoform 2 [Mus musculus] gi|50927531|gb|AAH79560.1| SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4 [Mus musculus] gi|74181104|dbj|BAE27821.1| unnamed protein product [Mus musculus] gi|148693262|gb|EDL25209.1| SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, isoform CRA_b [Mus musculus] Length = 1614 Score = 84.6 bits (208), Expect = 7e-15, Method: Composition-based stats. Identities = 30/160 (18%), Positives = 62/160 (38%), Gaps = 20/160 (12%) Query: 52 HDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAF---------PQGRTLDKDPCT 100 K + L+ I+ +A +++ S + ++ F G T +D Sbjct: 1078 ASGKFELLDRILPKLRATNHKVLLFCQMTSLMTIMEDYFAYRGFKYLRLDGTTKAEDRGM 1137 Query: 101 I-QEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 + + +NE + + + G GLNLQ + ++ F W+ + Q R Sbjct: 1138 LLKTFNEPGSEYFIFLLSTRAGGLGLNLQ-SADTVIIFDSDWNPHQDLQA-----QDRAH 1191 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + G + V V L N+++E +L + K + ++ A Sbjct: 1192 RIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQA 1231 >gi|169146018|emb|CAQ13521.1| novel protein similar to vertebrate chromodomain helicase DNA binding protein family [Danio rerio] Length = 2230 Score = 84.6 bits (208), Expect = 7e-15, Method: Composition-based stats. Identities = 28/158 (17%), Positives = 58/158 (36%), Gaps = 20/158 (12%) Query: 55 KIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTL----------DKDPCTIQ 102 K+ L+ ++ + A +++ L L+ R L + I Sbjct: 890 KLVLLDKLLPRLKAGGHKVLIFSQMVRCLDILEDYLIHKRYLYERIDGRVRGNLRQAAID 949 Query: 103 EWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 +++ + + G G+NL + V F W+ + Q R + G Sbjct: 950 RFSKPDSDRFVFLLCTRAGGLGINLT-AADTCVIFDSDWNPQNDLQAQARC-----HRIG 1003 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNAL 198 +AV VY LI +N+ + +L + K + +L ++ Sbjct: 1004 QSKAVKVYRLITRNSYEREMLDKASLKLGLDRAVLQSM 1041 >gi|170592228|ref|XP_001900871.1| CHD4 protein [Brugia malayi] gi|158591738|gb|EDP30342.1| CHD4 protein, putative [Brugia malayi] Length = 1846 Score = 84.6 bits (208), Expect = 7e-15, Method: Composition-based stats. Identities = 19/143 (13%), Positives = 49/143 (34%), Gaps = 18/143 (12%) Query: 67 NAAPIIVAYHFNSDLARL---------QKAFPQGRTLDKDPCT-IQEWNEGKIP--LLFA 114 +++ L + + G + I +N + Sbjct: 961 QGHRVLIFSQMTKMLDIMEDFCENEGYKYERIDGSITGQARQDAIDRFNAANAQQFVFLL 1020 Query: 115 HPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQN 174 + G G+NL + ++ + W+ Q +R + G ++ V +Y + +N Sbjct: 1021 STRAGGLGINL-ATADTVIIYDSDWNPHNDIQA-----FSRAHRIGQQKKVLIYRFVTRN 1074 Query: 175 TIDELVLQRLRTKSTIQDLLLNA 197 +++E + + K + L++ A Sbjct: 1075 SVEERITSVAKKKMLLTHLVVRA 1097 >gi|291463269|ref|NP_001167549.1| transcription activator BRG1 isoform 1 [Mus musculus] gi|74144347|dbj|BAE36034.1| unnamed protein product [Mus musculus] Length = 1617 Score = 84.6 bits (208), Expect = 7e-15, Method: Composition-based stats. Identities = 30/160 (18%), Positives = 62/160 (38%), Gaps = 20/160 (12%) Query: 52 HDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAF---------PQGRTLDKDPCT 100 K + L+ I+ +A +++ S + ++ F G T +D Sbjct: 1078 ASGKFELLDRILPKLRATNHKVLLFCQMTSLMTIMEDYFAYRGFKYLRLDGTTKAEDRGM 1137 Query: 101 I-QEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 + + +NE + + + G GLNLQ + ++ F W+ + Q R Sbjct: 1138 LLKTFNEPGSEYFIFLLSTRAGGLGLNLQ-SADTVIIFDSDWNPHQDLQA-----QDRAH 1191 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + G + V V L N+++E +L + K + ++ A Sbjct: 1192 RIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQA 1231 >gi|116207162|ref|XP_001229390.1| hypothetical protein CHGG_02874 [Chaetomium globosum CBS 148.51] gi|88183471|gb|EAQ90939.1| hypothetical protein CHGG_02874 [Chaetomium globosum CBS 148.51] Length = 1558 Score = 84.6 bits (208), Expect = 7e-15, Method: Composition-based stats. Identities = 30/157 (19%), Positives = 64/157 (40%), Gaps = 19/157 (12%) Query: 53 DEKIKALEVIIEKANAAP--IIVAYHFNSDLARLQKAFPQGRT----------LDKDPCT 100 KI L I+++ A ++V L ++ F + R + + Sbjct: 1061 SNKIVVLLRILDECKKAKDKVLVFSQSIPTLDYIENIFKRKRVVYQRLDGSTKMSTRQAS 1120 Query: 101 IQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQA 159 ++++N + + + S G GLN+ +G N +V F + + QQ I R + Sbjct: 1121 VKKFNTDAESQVYLVSTRSGGVGLNI-HGANRVVIFDFKYSPTDEQQAIGR-----AYRL 1174 Query: 160 GFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 G + V+VY+L T ++ + K+ + +++ Sbjct: 1175 GQTKPVYVYWLTVGGTFEDTIHNNAIFKAQLAKRVVD 1211 >gi|296201335|ref|XP_002806848.1| PREDICTED: LOW QUALITY PROTEIN: chromodomain-helicase-DNA-binding protein 3-like, partial [Callithrix jacchus] Length = 1916 Score = 84.6 bits (208), Expect = 7e-15, Method: Composition-based stats. Identities = 24/160 (15%), Positives = 52/160 (32%), Gaps = 20/160 (12%) Query: 45 EKHWKEVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQ----------KAFPQGR 92 E K+ L+ ++ K +++ L L+ + G Sbjct: 1041 EGGALIKSSGKLMLLQKMLRKLKEQGHRVLIFSQMTKMLDLLEDFLDYEGYKYERIDGGI 1100 Query: 93 TLDKDPCTIQEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 T I +N + + G G+NL + ++ F W+ Q Sbjct: 1101 TGALRQEAIDRFNAPGAQQFCFLLSTRAGGLGINL-ATADTVIIFDSDWNPHNDIQA--- 1156 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 +R + G V +Y + + +++E + Q + K + Sbjct: 1157 --FSRAHRIGQANKVMIYRFVTRASVEERITQVAKRKMML 1194 >gi|297261645|ref|XP_001107252.2| PREDICTED: chromodomain-helicase-DNA-binding protein 4-like isoform 8 [Macaca mulatta] Length = 1912 Score = 84.6 bits (208), Expect = 7e-15, Method: Composition-based stats. Identities = 19/136 (13%), Positives = 46/136 (33%), Gaps = 18/136 (13%) Query: 67 NAAPIIVAYHFNSDLARLQ----------KAFPQGRTLDKDPCTIQEWNEG--KIPLLFA 114 +++ L L+ + G T + I +N + Sbjct: 1065 GGHRVLIFSQMTKMLDLLEDFLEHEGYKYERIDGGITGNMRQEAIDRFNAPGAQQFCFLL 1124 Query: 115 HPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQN 174 + G G+NL + ++ + W+ Q +R + G + V +Y + + Sbjct: 1125 STRAGGLGINL-ATADTVIIYDSDWNPHNDIQA-----FSRAHRIGQNKKVMIYRFVTRA 1178 Query: 175 TIDELVLQRLRTKSTI 190 +++E + Q + K + Sbjct: 1179 SVEERITQVAKKKMML 1194 >gi|73986618|ref|XP_867778.1| PREDICTED: similar to SWI/SNF-related matrix-associated actin-dependent regulator of chromatin a4 isoform 13 [Canis familiaris] Length = 1608 Score = 84.6 bits (208), Expect = 7e-15, Method: Composition-based stats. Identities = 30/160 (18%), Positives = 62/160 (38%), Gaps = 20/160 (12%) Query: 52 HDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAF---------PQGRTLDKDPCT 100 K + L+ I+ +A +++ S + ++ F G T +D Sbjct: 1072 ASGKFELLDRILPKLRATNHKVLLFCQMTSLMTIMEDYFAYRGFKYLRLDGTTKAEDRGM 1131 Query: 101 I-QEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 + + +NE + + + G GLNLQ + ++ F W+ + Q R Sbjct: 1132 LLKTFNEPGSEYFIFLLSTRAGGLGLNLQ-SADTVIIFDSDWNPHQDLQA-----QDRAH 1185 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + G + V V L N+++E +L + K + ++ A Sbjct: 1186 RIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQA 1225 >gi|73986612|ref|XP_867753.1| PREDICTED: similar to SWI/SNF-related matrix-associated actin-dependent regulator of chromatin a4 isoform 10 [Canis familiaris] Length = 1609 Score = 84.6 bits (208), Expect = 7e-15, Method: Composition-based stats. Identities = 30/160 (18%), Positives = 62/160 (38%), Gaps = 20/160 (12%) Query: 52 HDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAF---------PQGRTLDKDPCT 100 K + L+ I+ +A +++ S + ++ F G T +D Sbjct: 1073 ASGKFELLDRILPKLRATNHKVLLFCQMTSLMTIMEDYFAYRGFKYLRLDGTTKAEDRGM 1132 Query: 101 I-QEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 + + +NE + + + G GLNLQ + ++ F W+ + Q R Sbjct: 1133 LLKTFNEPGSEYFIFLLSTRAGGLGLNLQ-SADTVIIFDSDWNPHQDLQA-----QDRAH 1186 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + G + V V L N+++E +L + K + ++ A Sbjct: 1187 RIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQA 1226 >gi|291463271|ref|NP_001167550.1| transcription activator BRG1 isoform 3 [Mus musculus] gi|123790047|sp|Q3TKT4|SMCA4_MOUSE RecName: Full=Transcription activator BRG1; AltName: Full=ATP-dependent helicase SMARCA4; AltName: Full=BRG1-associated factor 190A; Short=BAF190A; AltName: Full=Protein brahma homolog 1; AltName: Full=SNF2-beta; AltName: Full=SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 4 gi|74184874|dbj|BAE39059.1| unnamed protein product [Mus musculus] Length = 1613 Score = 84.6 bits (208), Expect = 7e-15, Method: Composition-based stats. Identities = 30/160 (18%), Positives = 62/160 (38%), Gaps = 20/160 (12%) Query: 52 HDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAF---------PQGRTLDKDPCT 100 K + L+ I+ +A +++ S + ++ F G T +D Sbjct: 1078 ASGKFELLDRILPKLRATNHKVLLFCQMTSLMTIMEDYFAYRGFKYLRLDGTTKAEDRGM 1137 Query: 101 I-QEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 + + +NE + + + G GLNLQ + ++ F W+ + Q R Sbjct: 1138 LLKTFNEPGSEYFIFLLSTRAGGLGLNLQ-SADTVIIFDSDWNPHQDLQA-----QDRAH 1191 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + G + V V L N+++E +L + K + ++ A Sbjct: 1192 RIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQA 1231 >gi|324508390|gb|ADY43542.1| Transcription termination factor 2 [Ascaris suum] Length = 693 Score = 84.6 bits (208), Expect = 7e-15, Method: Composition-based stats. Identities = 37/165 (22%), Positives = 68/165 (41%), Gaps = 20/165 (12%) Query: 53 DEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQKAFPQ---------GRTLDKDPCT- 100 K+ AL +++A ++ + S L ++ Q G+ L KD Sbjct: 487 SAKLVALFERLDQALALGDKCVIVSQWTSLLDIVEYHLKQRDVQYTSITGKVLTKDRQPR 546 Query: 101 IQEWNE--GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQ 158 ++ +N G ++ + G GLNL G + L L W+ QQ +RI + Sbjct: 547 VESFNRVGGGARVMLLSLTAGGVGLNLVGGNH-LFLIDLHWNPALEQQACDRI-----YR 600 Query: 159 AGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETI 203 G + VF++ +I TI+E VL ++K + +L + + Sbjct: 601 MGQTKEVFIHKIICLGTIEERVLTLQQSKMALAKGVLEGAASKKL 645 >gi|301771980|ref|XP_002921404.1| PREDICTED: transcription activator BRG1-like isoform 2 [Ailuropoda melanoleuca] Length = 1606 Score = 84.6 bits (208), Expect = 7e-15, Method: Composition-based stats. Identities = 30/160 (18%), Positives = 62/160 (38%), Gaps = 20/160 (12%) Query: 52 HDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAF---------PQGRTLDKDPCT 100 K + L+ I+ +A +++ S + ++ F G T +D Sbjct: 1078 ASGKFELLDRILPKLRATNHKVLLFCQMTSLMTIMEDYFAYRGFKYLRLDGTTKAEDRGM 1137 Query: 101 I-QEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 + + +NE + + + G GLNLQ + ++ F W+ + Q R Sbjct: 1138 LLKTFNEPGSEYFIFLLSTRAGGLGLNLQ-SADTVIIFDSDWNPHQDLQA-----QDRAH 1191 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + G + V V L N+++E +L + K + ++ A Sbjct: 1192 RIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQA 1231 >gi|238062909|ref|ZP_04607618.1| conserved hypothetical protein [Micromonospora sp. ATCC 39149] gi|237884720|gb|EEP73548.1| conserved hypothetical protein [Micromonospora sp. ATCC 39149] Length = 795 Score = 84.6 bits (208), Expect = 7e-15, Method: Composition-based stats. Identities = 39/190 (20%), Positives = 74/190 (38%), Gaps = 23/190 (12%) Query: 13 CDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKA--NAAP 70 ++ A+ A + + + AV D K++ L II++A N Sbjct: 562 VEMGQAETRAYRRAVEARQFAHMRRAAVVIDGSVMP-----AKVERLREIIQEAADNGWK 616 Query: 71 IIVAYHFNSDLARLQKAFPQ---------GRTLDKDPCTIQEWNEGK-IPLLFAHPASCG 120 ++V F L R++ + + + + +++ +L + G Sbjct: 617 VVVFSFFLEVLERVRVSLQEDTPVFLLSGAVPVAARQQVVDDFSGTDGHAVLVSQIGVGG 676 Query: 121 HGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELV 180 GLNL +I+V +Q I R + G R V V+ L+A+NT+D+ + Sbjct: 677 VGLNL-PAASIVVLTEPQLTPAHEEQAIRRC-----YRMGQTRGVRVHRLLARNTVDQRL 730 Query: 181 LQRLRTKSTI 190 L+ L KS + Sbjct: 731 LEMLERKSAL 740 >gi|302505721|ref|XP_003014567.1| hypothetical protein ARB_07129 [Arthroderma benhamiae CBS 112371] gi|291178388|gb|EFE34178.1| hypothetical protein ARB_07129 [Arthroderma benhamiae CBS 112371] Length = 921 Score = 84.6 bits (208), Expect = 8e-15, Method: Composition-based stats. Identities = 30/150 (20%), Positives = 58/150 (38%), Gaps = 20/150 (13%) Query: 55 KIKALEVIIEK---ANAAPIIVAYHFNSDLARLQKAFP-----------QGRTLDKDPCT 100 KI+AL I+ A +V + S L ++ + + +D Sbjct: 750 KIQALVKILTAKGQAAGTKTVVFSQWTSFLDLIEPHLVLYNINFARIDGKMNSAKRDAAM 809 Query: 101 IQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 + + + ++ A C GLNL N +V WW Q ++R+ + G Sbjct: 810 SKFSRDSECTVMLASLNVCSVGLNL-VAANQVVLADSWWAPAIEDQAVDRV-----YRLG 863 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 R ++ L+ +N+I++ VL + K + Sbjct: 864 QTRPTTIWRLVMENSIEDRVLDIQKEKREL 893 >gi|224043897|ref|XP_002197085.1| PREDICTED: similar to chromodomain helicase DNA binding protein 4 [Taeniopygia guttata] Length = 1919 Score = 84.6 bits (208), Expect = 8e-15, Method: Composition-based stats. Identities = 19/136 (13%), Positives = 46/136 (33%), Gaps = 18/136 (13%) Query: 67 NAAPIIVAYHFNSDLARLQ----------KAFPQGRTLDKDPCTIQEWNEG--KIPLLFA 114 +++ L L+ + G T + I +N + Sbjct: 1059 GGHRVLIFSQMTKMLDLLEDFLEHEGYKYERIDGGITGNMRQEAIDRFNAPGAQQFCFLL 1118 Query: 115 HPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQN 174 + G G+NL + ++ + W+ Q +R + G + V +Y + + Sbjct: 1119 STRAGGLGINL-ATADTVIIYDSDWNPHNDIQA-----FSRAHRIGQNKKVMIYRFVTRA 1172 Query: 175 TIDELVLQRLRTKSTI 190 +++E + Q + K + Sbjct: 1173 SVEERITQVAKKKMML 1188 >gi|126340045|ref|XP_001369474.1| PREDICTED: similar to Mi-2 protein [Monodelphis domestica] Length = 1777 Score = 84.6 bits (208), Expect = 8e-15, Method: Composition-based stats. Identities = 19/136 (13%), Positives = 46/136 (33%), Gaps = 18/136 (13%) Query: 67 NAAPIIVAYHFNSDLARLQ----------KAFPQGRTLDKDPCTIQEWNEG--KIPLLFA 114 +++ L L+ + G T + I +N + Sbjct: 930 GGHRVLIFSQMTKMLDLLEDFLEHEGYKYERIDGGITGNMRQEAIDRFNAPGAQQFCFLL 989 Query: 115 HPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQN 174 + G G+NL + ++ + W+ Q +R + G + V +Y + + Sbjct: 990 STRAGGLGINL-ATADTVIIYDSDWNPHNDIQA-----FSRAHRIGQNKKVMIYRFVTRA 1043 Query: 175 TIDELVLQRLRTKSTI 190 +++E + Q + K + Sbjct: 1044 SVEERITQVAKKKMML 1059 >gi|328854066|gb|EGG03201.1| hypothetical protein MELLADRAFT_90365 [Melampsora larici-populina 98AG31] Length = 863 Score = 84.6 bits (208), Expect = 8e-15, Method: Composition-based stats. Identities = 29/137 (21%), Positives = 55/137 (40%), Gaps = 17/137 (12%) Query: 67 NAAPIIVAYHFNSDLARL----QKAFP-------QGRTLDKDPCTIQEWNEGKIPLLFAH 115 A +++ + + L ++ FP + T ++ + + + A Sbjct: 687 EGAKVLIFSQWTKMMDILSYWLEQDFPGFVRLDGKVPTAERMARVDEFQRDPDKFIFLAS 746 Query: 116 PASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNT 175 + G GLNL N +V F W+ Q ++R+ + G KR+V LIA T Sbjct: 747 TLAGGVGLNLT-AANKVVIFDPSWNPSSDAQAMDRVC-----RIGQKRSVECLRLIALGT 800 Query: 176 IDELVLQRLRTKSTIQD 192 +EL+ R K+ + + Sbjct: 801 AEELIYHRQVYKTHLAE 817 >gi|322710278|gb|EFZ01853.1| putative DNA repair protein RAD26 [Metarhizium anisopliae ARSEF 23] Length = 1085 Score = 84.6 bits (208), Expect = 8e-15, Method: Composition-based stats. Identities = 30/137 (21%), Positives = 50/137 (36%), Gaps = 17/137 (12%) Query: 67 NAAPIIVAYHFNSDLARLQKAF---------PQGRTLDKDPCTIQE-WN-EGKIPLLFAH 115 N ++V H L LQ F G ++ + + +N + + Sbjct: 567 NGDKVLVFSHSVRLLRILQHLFTSTSYNVSYLDGSLSYEERQDVVDTFNSDPAQFVFLIS 626 Query: 116 PASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNT 175 + G GLN+ N +V W+ Q R + G R V V+ LI+Q T Sbjct: 627 TKAGGVGLNIT-SANKVVIVDPHWNPSYDLQA-----QDRAYRIGQTRDVEVFRLISQGT 680 Query: 176 IDELVLQRLRTKSTIQD 192 ++E+V R K + Sbjct: 681 VEEIVYARQVYKQQQAN 697 >gi|302653552|ref|XP_003018600.1| hypothetical protein TRV_07391 [Trichophyton verrucosum HKI 0517] gi|291182257|gb|EFE37955.1| hypothetical protein TRV_07391 [Trichophyton verrucosum HKI 0517] Length = 1518 Score = 84.6 bits (208), Expect = 8e-15, Method: Composition-based stats. Identities = 20/143 (13%), Positives = 50/143 (34%), Gaps = 18/143 (12%) Query: 68 AAPIIVAYHFNSDLARLQKAFPQGRTLD----------KDPCTIQEWNEG--KIPLLFAH 115 +++ F L ++ K I +N + Sbjct: 1006 GHRVLIFSQFLDFLDIVEDFLDGLGLKHLRLDGSMTSLKKQKNIDAYNAPGSEYFAFLLS 1065 Query: 116 PASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNT 175 + G G+NL + ++ ++ + Q + R + G K+ V V+ L+ + + Sbjct: 1066 TRAGGVGINL-ATADTVIILDPDFNPHQDIQALSR-----AHRIGQKKKVMVFQLMTRGS 1119 Query: 176 IDELVLQRLRTKSTIQDLLLNAL 198 +E ++Q + K + +L+ + Sbjct: 1120 AEEKIMQIGKKKMALDHVLIERM 1142 >gi|302504244|ref|XP_003014081.1| hypothetical protein ARB_07801 [Arthroderma benhamiae CBS 112371] gi|291177648|gb|EFE33441.1| hypothetical protein ARB_07801 [Arthroderma benhamiae CBS 112371] Length = 1518 Score = 84.6 bits (208), Expect = 8e-15, Method: Composition-based stats. Identities = 20/143 (13%), Positives = 50/143 (34%), Gaps = 18/143 (12%) Query: 68 AAPIIVAYHFNSDLARLQKAFPQGRTLD----------KDPCTIQEWNEG--KIPLLFAH 115 +++ F L ++ K I +N + Sbjct: 1006 GHRVLIFSQFLDFLDIVEDFLDGLGLKHLRLDGSMTSLKKQKNIDAYNAPGSEYFAFLLS 1065 Query: 116 PASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNT 175 + G G+NL + ++ ++ + Q + R + G K+ V V+ L+ + + Sbjct: 1066 TRAGGVGINL-ATADTVIILDPDFNPHQDIQALSR-----AHRIGQKKKVMVFQLMTRGS 1119 Query: 176 IDELVLQRLRTKSTIQDLLLNAL 198 +E ++Q + K + +L+ + Sbjct: 1120 AEEKIMQIGKKKMALDHVLIERM 1142 >gi|261196956|ref|XP_002624881.1| DNA excision repair protein [Ajellomyces dermatitidis SLH14081] gi|239596126|gb|EEQ78707.1| DNA excision repair protein [Ajellomyces dermatitidis SLH14081] Length = 1026 Score = 84.6 bits (208), Expect = 8e-15, Method: Composition-based stats. Identities = 29/138 (21%), Positives = 48/138 (34%), Gaps = 17/138 (12%) Query: 66 ANAAPIIVAYHFNSDLARLQKAFP----------QGRTLDKDPCTIQEWN-EGKIPLLFA 114 N ++V H L LQ F + D + +N + + + Sbjct: 628 GNGDKVLVFSHSVRLLKMLQMLFKHTSYNVSYLDGAMSYDDRTKAVDSFNADPREFVFLI 687 Query: 115 HPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQN 174 + G GLN+ N +V W+ Q R + G R V V+ L++ Sbjct: 688 STRAGGVGLNIT-SANKVVVVDPNWNPAYDLQA-----QDRAYRIGQSRDVEVFRLVSAG 741 Query: 175 TIDELVLQRLRTKSTIQD 192 TI+E+V R K + Sbjct: 742 TIEEIVYARQIYKQQQAN 759 >gi|295675065|ref|XP_002798078.1| conserved hypothetical protein [Paracoccidioides brasiliensis Pb01] gi|226280728|gb|EEH36294.1| conserved hypothetical protein [Paracoccidioides brasiliensis Pb01] Length = 1074 Score = 84.6 bits (208), Expect = 8e-15, Method: Composition-based stats. Identities = 39/207 (18%), Positives = 73/207 (35%), Gaps = 26/207 (12%) Query: 4 YHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVII 63 Y R+ + Q + + + + K Q Y K + + +E Sbjct: 858 YSAITRQGFEKFQAYQLSSRQNPKQAKKFGQ------YEGPHTKTKALISHLLDTIEESK 911 Query: 64 EKANAAPI--IVAYHFNSDLARLQKAFPQGRT-----------LDKDPCTIQEWNEGK-I 109 + API IV + S L +Q A L + + + + + Sbjct: 912 KSPEKAPIKSIVFSSWTSHLDLIQIALEDNGITSFTRLDGTMSLKQRNAALDAFRDDDNV 971 Query: 110 PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYY 169 +L A + G GLNL G + ++ Q ++R+ + G R V Sbjct: 972 TILLATLGAGGVGLNLTSGSRAYIM-EPQYNPAAIAQAVDRV-----HRLGQTREVTTIQ 1025 Query: 170 LIAQNTIDELVLQRLRTKSTIQDLLLN 196 I +++I+E + + R K + D+ LN Sbjct: 1026 FIMKDSIEEKIAELARKKQQMADMSLN 1052 >gi|149049417|gb|EDM01871.1| chromodomain helicase DNA binding protein 4, isoform CRA_a [Rattus norvegicus] Length = 1003 Score = 84.6 bits (208), Expect = 8e-15, Method: Composition-based stats. Identities = 19/136 (13%), Positives = 46/136 (33%), Gaps = 18/136 (13%) Query: 67 NAAPIIVAYHFNSDLARLQ----------KAFPQGRTLDKDPCTIQEWNEG--KIPLLFA 114 +++ L L+ + G T + I +N + Sbjct: 117 GGHRVLIFSQMTKMLDLLEDFLEHEGYKYERIDGGITGNMRQEAIDRFNAPGAQQFCFLL 176 Query: 115 HPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQN 174 + G G+NL + ++ + W+ Q +R + G + V +Y + + Sbjct: 177 STRAGGLGINL-ATADTVIIYDSDWNPHNDIQA-----FSRAHRIGQNKKVMIYRFVTRA 230 Query: 175 TIDELVLQRLRTKSTI 190 +++E + Q + K + Sbjct: 231 SVEERITQVAKKKMML 246 >gi|73986604|ref|XP_867713.1| PREDICTED: similar to SWI/SNF-related matrix-associated actin-dependent regulator of chromatin a4 isoform 6 [Canis familiaris] Length = 1610 Score = 84.6 bits (208), Expect = 8e-15, Method: Composition-based stats. Identities = 30/160 (18%), Positives = 62/160 (38%), Gaps = 20/160 (12%) Query: 52 HDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAF---------PQGRTLDKDPCT 100 K + L+ I+ +A +++ S + ++ F G T +D Sbjct: 1074 ASGKFELLDRILPKLRATNHKVLLFCQMTSLMTIMEDYFAYRGFKYLRLDGTTKAEDRGM 1133 Query: 101 I-QEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 + + +NE + + + G GLNLQ + ++ F W+ + Q R Sbjct: 1134 LLKTFNEPGSEYFIFLLSTRAGGLGLNLQ-SADTVIIFDSDWNPHQDLQA-----QDRAH 1187 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + G + V V L N+++E +L + K + ++ A Sbjct: 1188 RIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQA 1227 >gi|326912771|ref|XP_003202720.1| PREDICTED: chromodomain-helicase-DNA-binding protein 4-like [Meleagris gallopavo] Length = 1922 Score = 84.6 bits (208), Expect = 8e-15, Method: Composition-based stats. Identities = 19/136 (13%), Positives = 46/136 (33%), Gaps = 18/136 (13%) Query: 67 NAAPIIVAYHFNSDLARLQ----------KAFPQGRTLDKDPCTIQEWNEG--KIPLLFA 114 +++ L L+ + G T + I +N + Sbjct: 1066 GGHRVLIFSQMTKMLDLLEDFLEHEGYKYERIDGGITGNMRQEAIDRFNAPGAQQFCFLL 1125 Query: 115 HPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQN 174 + G G+NL + ++ + W+ Q +R + G + V +Y + + Sbjct: 1126 STRAGGLGINL-ATADTVIIYDSDWNPHNDIQA-----FSRAHRIGQNKKVMIYRFVTRA 1179 Query: 175 TIDELVLQRLRTKSTI 190 +++E + Q + K + Sbjct: 1180 SVEERITQVAKKKMML 1195 >gi|311262809|ref|XP_003129366.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1-like [Sus scrofa] Length = 1027 Score = 84.6 bits (208), Expect = 8e-15, Method: Composition-based stats. Identities = 30/157 (19%), Positives = 62/157 (39%), Gaps = 19/157 (12%) Query: 51 VHDEKIKALEVIIEKAN--AAPIIVAYHFNSDLARL---------QKAFPQGRT-LDKDP 98 + K + L I+ + +++ F L L + G+T + + Sbjct: 852 LDSGKFRVLGCILSELKQKGDRVVLFSQFTMMLDILEVLLKHHQHRYLRLDGKTQISERI 911 Query: 99 CTIQEWNEG-KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 I E+N I + + G G+NL N+++ + + +Q +R Sbjct: 912 HLIDEFNTDMDIFVFLLSTKAGGLGINLT-SANVVILHDIDCNPYNDKQAEDRC-----H 965 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 + G + V V LI+Q TI+E +L+ + K ++ + Sbjct: 966 RVGQTKEVLVIKLISQGTIEESMLKINQQKLKLEQDM 1002 >gi|149755450|ref|XP_001490674.1| PREDICTED: similar to Probable global transcription activator SNF2L4 (ATP-dependent helicase SMARCA4) (SNF2-beta) (BRG-1 protein) (Mitotic growth and transcription activator) (Brahma protein homolog 1) (SWI/SNF-related matrix-associated actin-dependent regula isoform 1 [Equus caballus] Length = 1647 Score = 84.6 bits (208), Expect = 8e-15, Method: Composition-based stats. Identities = 30/160 (18%), Positives = 63/160 (39%), Gaps = 20/160 (12%) Query: 52 HDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAF---------PQGRTLDKDPCT 100 K + L+ I+ +A + +++ S + ++ F G T +D Sbjct: 1078 ASGKFELLDRILPKLRATSHKVLLFCQMTSLMTIMEDYFAYRGFKYLRLDGTTKAEDRGM 1137 Query: 101 I-QEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 + + +NE + + + G GLNLQ + ++ F W+ + Q R Sbjct: 1138 LLKTFNEPGSEYFIFLLSTRAGGLGLNLQ-SADTVIIFDSDWNPHQDLQA-----QDRAH 1191 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + G + V V L N+++E +L + K + ++ A Sbjct: 1192 RIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQA 1231 >gi|149049418|gb|EDM01872.1| chromodomain helicase DNA binding protein 4, isoform CRA_b [Rattus norvegicus] gi|149049420|gb|EDM01874.1| chromodomain helicase DNA binding protein 4, isoform CRA_b [Rattus norvegicus] gi|149049423|gb|EDM01877.1| chromodomain helicase DNA binding protein 4, isoform CRA_b [Rattus norvegicus] Length = 679 Score = 84.6 bits (208), Expect = 8e-15, Method: Composition-based stats. Identities = 19/136 (13%), Positives = 46/136 (33%), Gaps = 18/136 (13%) Query: 67 NAAPIIVAYHFNSDLARLQ----------KAFPQGRTLDKDPCTIQEWNEG--KIPLLFA 114 +++ L L+ + G T + I +N + Sbjct: 117 GGHRVLIFSQMTKMLDLLEDFLEHEGYKYERIDGGITGNMRQEAIDRFNAPGAQQFCFLL 176 Query: 115 HPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQN 174 + G G+NL + ++ + W+ Q +R + G + V +Y + + Sbjct: 177 STRAGGLGINL-ATADTVIIYDSDWNPHNDIQA-----FSRAHRIGQNKKVMIYRFVTRA 230 Query: 175 TIDELVLQRLRTKSTI 190 +++E + Q + K + Sbjct: 231 SVEERITQVAKKKMML 246 >gi|145335288|ref|NP_172336.3| ATRX; ATP binding / DNA binding / helicase/ nucleic acid binding [Arabidopsis thaliana] gi|332190193|gb|AEE28314.1| DEAD-like helicase domain-containing protein [Arabidopsis thaliana] gi|332190194|gb|AEE28315.1| DEAD-like helicase domain-containing protein [Arabidopsis thaliana] gi|332190195|gb|AEE28316.1| DEAD-like helicase domain-containing protein [Arabidopsis thaliana] Length = 1479 Score = 84.6 bits (208), Expect = 8e-15, Method: Composition-based stats. Identities = 32/183 (17%), Positives = 64/183 (34%), Gaps = 36/183 (19%) Query: 49 KEVHDEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQ-------------KAFPQGR- 92 K+ L I+ + +V L ++ K + +G+ Sbjct: 1110 VSDFSGKMILLLDILSMSADVGDKALVFSQSIPTLDLIELYLSRVPRHGKQGKFWKKGKD 1169 Query: 93 --------TLDKDPCTIQEWNEGK---IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDL 141 + + +NE + + G+NL Y N ++ W+ Sbjct: 1170 WYRIDGKTESSERQKLVDRFNEPDNKRVKCTLISTRAGSLGINL-YAANRVIIVDGSWNP 1228 Query: 142 EEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 Q I R + G K+ VF Y L+A+ TI+E + +R TK + +++ ++ Sbjct: 1229 TYDLQAI-----FRAWRYGQKKPVFAYRLMARGTIEEKIYKRQVTKEGLAARVVD---RQ 1280 Query: 202 TIH 204 +H Sbjct: 1281 QVH 1283 >gi|114643071|ref|XP_508960.2| PREDICTED: chromodomain helicase DNA binding protein 4 isoform 3 [Pan troglodytes] Length = 1886 Score = 84.6 bits (208), Expect = 8e-15, Method: Composition-based stats. Identities = 19/136 (13%), Positives = 46/136 (33%), Gaps = 18/136 (13%) Query: 67 NAAPIIVAYHFNSDLARLQ----------KAFPQGRTLDKDPCTIQEWNEG--KIPLLFA 114 +++ L L+ + G T + I +N + Sbjct: 1039 GGHRVLIFSQMTKMLDLLEDFLEHEGYKYERIDGGITGNMRQEAIDRFNAPGAQQFCFLL 1098 Query: 115 HPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQN 174 + G G+NL + ++ + W+ Q +R + G + V +Y + + Sbjct: 1099 STRAGGLGINL-ATADTVIIYDSDWNPHNDIQA-----FSRAHRIGQNKKVMIYRFVTRA 1152 Query: 175 TIDELVLQRLRTKSTI 190 +++E + Q + K + Sbjct: 1153 SVEERITQVAKKKMML 1168 >gi|114643073|ref|XP_001162478.1| PREDICTED: chromodomain helicase DNA binding protein 4 isoform 2 [Pan troglodytes] Length = 1893 Score = 84.6 bits (208), Expect = 8e-15, Method: Composition-based stats. Identities = 19/136 (13%), Positives = 46/136 (33%), Gaps = 18/136 (13%) Query: 67 NAAPIIVAYHFNSDLARLQ----------KAFPQGRTLDKDPCTIQEWNEG--KIPLLFA 114 +++ L L+ + G T + I +N + Sbjct: 1046 GGHRVLIFSQMTKMLDLLEDFLEHEGYKYERIDGGITGNMRQEAIDRFNAPGAQQFCFLL 1105 Query: 115 HPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQN 174 + G G+NL + ++ + W+ Q +R + G + V +Y + + Sbjct: 1106 STRAGGLGINL-ATADTVIIYDSDWNPHNDIQA-----FSRAHRIGQNKKVMIYRFVTRA 1159 Query: 175 TIDELVLQRLRTKSTI 190 +++E + Q + K + Sbjct: 1160 SVEERITQVAKKKMML 1175 >gi|218199702|gb|EEC82129.1| hypothetical protein OsI_26164 [Oryza sativa Indica Group] Length = 816 Score = 84.6 bits (208), Expect = 8e-15, Method: Composition-based stats. Identities = 28/152 (18%), Positives = 51/152 (33%), Gaps = 19/152 (12%) Query: 52 HDEKIKALEV-----IIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDK-----DPCTI 101 KI AL + +IE N V L L+ + K I Sbjct: 649 TSTKIDALFLAYMFLLIESHNDVNGDVNDENT--LVNLKSGIKCVQLNGKMNIVEKGKAI 706 Query: 102 QEW-NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 + N+ + + G LNL + + WW+ Q +RI + G Sbjct: 707 DTFTNDPDCRIFLMSLKAGGVALNLTVASH-VFLMDPWWNPAVESQAQDRI-----HRIG 760 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTIQD 192 + + + ++T++E +LQ K + + Sbjct: 761 QFKPIRSMRFVIKDTVEERILQLQEKKRLVFE 792 >gi|193785938|dbj|BAG54725.1| unnamed protein product [Homo sapiens] Length = 1886 Score = 84.6 bits (208), Expect = 8e-15, Method: Composition-based stats. Identities = 19/136 (13%), Positives = 46/136 (33%), Gaps = 18/136 (13%) Query: 67 NAAPIIVAYHFNSDLARLQ----------KAFPQGRTLDKDPCTIQEWNEG--KIPLLFA 114 +++ L L+ + G T + I +N + Sbjct: 1039 GGHRVLIFSQMTKMLDLLEDFLEHEGYKYERIDGGITGNMRQEAIDRFNAPGAQQFCFLL 1098 Query: 115 HPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQN 174 + G G+NL + ++ + W+ Q +R + G + V +Y + + Sbjct: 1099 STRAGGLGINL-ATADTVIIYDSDWNPHNDIQA-----FSRAHRIGQNKKVMIYRFVTRA 1152 Query: 175 TIDELVLQRLRTKSTI 190 +++E + Q + K + Sbjct: 1153 SVEERITQVAKKKMML 1168 >gi|73986622|ref|XP_867793.1| PREDICTED: similar to SWI/SNF-related matrix-associated actin-dependent regulator of chromatin a4 isoform 15 [Canis familiaris] Length = 1618 Score = 84.6 bits (208), Expect = 8e-15, Method: Composition-based stats. Identities = 30/160 (18%), Positives = 62/160 (38%), Gaps = 20/160 (12%) Query: 52 HDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAF---------PQGRTLDKDPCT 100 K + L+ I+ +A +++ S + ++ F G T +D Sbjct: 1082 ASGKFELLDRILPKLRATNHKVLLFCQMTSLMTIMEDYFAYRGFKYLRLDGTTKAEDRGM 1141 Query: 101 I-QEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 + + +NE + + + G GLNLQ + ++ F W+ + Q R Sbjct: 1142 LLKTFNEPGSEYFIFLLSTRAGGLGLNLQ-SADTVIIFDSDWNPHQDLQA-----QDRAH 1195 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + G + V V L N+++E +L + K + ++ A Sbjct: 1196 RIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQA 1235 >gi|73986624|ref|XP_867800.1| PREDICTED: similar to SWI/SNF-related matrix-associated actin-dependent regulator of chromatin a4 isoform 16 [Canis familiaris] Length = 1594 Score = 84.6 bits (208), Expect = 8e-15, Method: Composition-based stats. Identities = 30/160 (18%), Positives = 62/160 (38%), Gaps = 20/160 (12%) Query: 52 HDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAF---------PQGRTLDKDPCT 100 K + L+ I+ +A +++ S + ++ F G T +D Sbjct: 1059 ASGKFELLDRILPKLRATNHKVLLFCQMTSLMTIMEDYFAYRGFKYLRLDGTTKAEDRGM 1118 Query: 101 I-QEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 + + +NE + + + G GLNLQ + ++ F W+ + Q R Sbjct: 1119 LLKTFNEPGSEYFIFLLSTRAGGLGLNLQ-SADTVIIFDSDWNPHQDLQA-----QDRAH 1172 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + G + V V L N+++E +L + K + ++ A Sbjct: 1173 RIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQA 1212 >gi|73986598|ref|XP_867683.1| PREDICTED: similar to SWI/SNF-related matrix-associated actin-dependent regulator of chromatin a4 isoform 3 [Canis familiaris] gi|73986644|ref|XP_867874.1| PREDICTED: similar to SWI/SNF-related matrix-associated actin-dependent regulator of chromatin a4 isoform 24 [Canis familiaris] Length = 1614 Score = 84.6 bits (208), Expect = 8e-15, Method: Composition-based stats. Identities = 30/160 (18%), Positives = 62/160 (38%), Gaps = 20/160 (12%) Query: 52 HDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAF---------PQGRTLDKDPCT 100 K + L+ I+ +A +++ S + ++ F G T +D Sbjct: 1078 ASGKFELLDRILPKLRATNHKVLLFCQMTSLMTIMEDYFAYRGFKYLRLDGTTKAEDRGM 1137 Query: 101 I-QEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 + + +NE + + + G GLNLQ + ++ F W+ + Q R Sbjct: 1138 LLKTFNEPGSEYFIFLLSTRAGGLGLNLQ-SADTVIIFDSDWNPHQDLQA-----QDRAH 1191 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + G + V V L N+++E +L + K + ++ A Sbjct: 1192 RIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQA 1231 >gi|126291802|ref|XP_001381614.1| PREDICTED: similar to chromodomain helicase DNA binding protein 6, [Monodelphis domestica] Length = 2716 Score = 84.6 bits (208), Expect = 8e-15, Method: Composition-based stats. Identities = 25/149 (16%), Positives = 52/149 (34%), Gaps = 18/149 (12%) Query: 66 ANAAPIIVAYHFNSDLARLQKAFPQGR-TLDK---------DPCTIQEWNEGKIP--LLF 113 A +++ L L+ Q R T ++ I + + + Sbjct: 794 AGGHKVLIFSQMVRCLDILEDYLIQRRYTYERIDGRVRGNLRQAAIDRFCKPDSDRFVFL 853 Query: 114 AHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQ 173 + G G+NL + + F W+ + Q R + G +AV VY LI + Sbjct: 854 LCTRAGGLGINLT-AADTCIIFDSDWNPQNDLQAQARC-----HRIGQSKAVKVYRLITR 907 Query: 174 NTIDELVLQRLRTKSTIQDLLLNALKKET 202 N+ + + + K + +L + ++ Sbjct: 908 NSYEREMFDKASLKLGLDKAVLQDINRKG 936 >gi|73949862|ref|XP_863483.1| PREDICTED: similar to chromodomain helicase DNA binding protein 9 isoform 4 [Canis familiaris] Length = 2886 Score = 84.6 bits (208), Expect = 8e-15, Method: Composition-based stats. Identities = 25/146 (17%), Positives = 51/146 (34%), Gaps = 18/146 (12%) Query: 65 KANAAPIIVAYHFNSDLARLQKAFPQGRTL----------DKDPCTIQEWNEGKIP--LL 112 KA +++ L L+ R L + I +++ + Sbjct: 1197 KAGGHKVLIFSQMVRCLDILEDYLIHKRYLYERIDGRVRGNLRQAAIDRFSKPDSDRFVF 1256 Query: 113 FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIA 172 + G G+NL + + F W+ + Q R + G +AV VY L+ Sbjct: 1257 LLCTRAGGLGINLT-AADTCIIFDSDWNPQNDLQAQARC-----HRIGQNKAVKVYRLVT 1310 Query: 173 QNTIDELVLQRLRTKSTIQDLLLNAL 198 +N+ + + R K + +L ++ Sbjct: 1311 RNSYEREMFDRASLKLGLDKAVLQSM 1336 >gi|156055468|ref|XP_001593658.1| hypothetical protein SS1G_05086 [Sclerotinia sclerotiorum 1980] gi|154702870|gb|EDO02609.1| hypothetical protein SS1G_05086 [Sclerotinia sclerotiorum 1980 UF-70] Length = 1012 Score = 84.6 bits (208), Expect = 8e-15, Method: Composition-based stats. Identities = 28/137 (20%), Positives = 49/137 (35%), Gaps = 17/137 (12%) Query: 67 NAAPIIVAYHFNSDLARLQK---------AFPQGRTLDKDPCT-IQEWN-EGKIPLLFAH 115 +++ H L LQ +F G +D + ++N + + Sbjct: 611 EGDKVLIFSHSVKLLRMLQHLFQSTSYNVSFLSGEMKYEDRQDTVDDFNYDPNQFIFLIS 670 Query: 116 PASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNT 175 + G GLN+ N +V F W+ Q R + G R V + L++ T Sbjct: 671 TKAGGVGLNIT-SANKVVIFDPNWNPSYDLQA-----QDRAYRIGQLRDVDSFRLVSAGT 724 Query: 176 IDELVLQRLRTKSTIQD 192 I+E+V R K + Sbjct: 725 IEEVVYARQIYKQQQAN 741 >gi|189521245|ref|XP_696641.3| PREDICTED: chromodomain-helicase-DNA-binding protein 3 [Danio rerio] Length = 2063 Score = 84.6 bits (208), Expect = 8e-15, Method: Composition-based stats. Identities = 25/153 (16%), Positives = 52/153 (33%), Gaps = 20/153 (13%) Query: 52 HDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQ----------KAFPQGRTLDKDPC 99 K+ L+ ++ K ++V L L+ + G T Sbjct: 1073 ASGKLMLLQKMLRKLKEQGHRVLVFSQMTKMLDLLEDFLDSEGYKYERIDGGITGALRQE 1132 Query: 100 TIQEWNE-GKIPL-LFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 I +N G + + G G+NL + ++ F W+ Q +R Sbjct: 1133 AIDRFNAPGAVQFCFLLSTRAGGLGINL-ATADTVIIFDSDWNPHNDIQA-----FSRAH 1186 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 + G V +Y + + +++E + Q + K + Sbjct: 1187 RIGQANKVMIYRFVTRASVEERITQVAKRKMML 1219 >gi|171693995|ref|XP_001911922.1| hypothetical protein [Podospora anserina S mat+] gi|170946946|emb|CAP73750.1| unnamed protein product [Podospora anserina S mat+] Length = 957 Score = 84.6 bits (208), Expect = 8e-15, Method: Composition-based stats. Identities = 25/164 (15%), Positives = 52/164 (31%), Gaps = 24/164 (14%) Query: 59 LEVIIEKANAAPIIVAYHFNSDLA----RLQKAFPQGRTLDKDPCTIQEW-------NEG 107 L + + I+ F + L RL++A LD Q Sbjct: 794 LHKLRSDNASHKSIIFSQFTTMLQLIEWRLRRAGITTVMLDGSMTPAQRQASIHHFMTNP 853 Query: 108 KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFV 167 + + G LNL + + WW+ Q +R + G R + Sbjct: 854 DVECFLVSLKAGGVALNLTEASRVFI-VDPWWNPAAEWQSADRC-----HRIGQTRPCTI 907 Query: 168 YYLIAQNTIDELVLQRLRTKSTI-------QDLLLNALKKETIH 204 L +++++ ++ K+ + D +++L E + Sbjct: 908 TRLCIEDSVESRMVLLQEKKTNMINSTINSDDAAMDSLSPEDLQ 951 >gi|192807316|ref|NP_001122318.1| transcription activator BRG1 isoform D [Homo sapiens] gi|167888966|gb|ACA09752.1| SMARCA4 isoform 4 [Homo sapiens] gi|307685613|dbj|BAJ20737.1| SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4 [synthetic construct] Length = 1616 Score = 84.6 bits (208), Expect = 8e-15, Method: Composition-based stats. Identities = 30/160 (18%), Positives = 62/160 (38%), Gaps = 20/160 (12%) Query: 52 HDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAF---------PQGRTLDKDPCT 100 K + L+ I+ +A +++ S + ++ F G T +D Sbjct: 1078 ASGKFELLDRILPKLRATNHKVLLFCQMTSLMTIMEDYFAYRGFKYLRLDGTTKAEDRGM 1137 Query: 101 I-QEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 + + +NE + + + G GLNLQ + ++ F W+ + Q R Sbjct: 1138 LLKTFNEPGSEYFIFLLSTRAGGLGLNLQ-SADTVIIFDSDWNPHQDLQA-----QDRAH 1191 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + G + V V L N+++E +L + K + ++ A Sbjct: 1192 RIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQA 1231 >gi|73986620|ref|XP_867786.1| PREDICTED: similar to SWI/SNF-related matrix-associated actin-dependent regulator of chromatin a4 isoform 14 [Canis familiaris] Length = 1605 Score = 84.6 bits (208), Expect = 8e-15, Method: Composition-based stats. Identities = 30/160 (18%), Positives = 62/160 (38%), Gaps = 20/160 (12%) Query: 52 HDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAF---------PQGRTLDKDPCT 100 K + L+ I+ +A +++ S + ++ F G T +D Sbjct: 1069 ASGKFELLDRILPKLRATNHKVLLFCQMTSLMTIMEDYFAYRGFKYLRLDGTTKAEDRGM 1128 Query: 101 I-QEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 + + +NE + + + G GLNLQ + ++ F W+ + Q R Sbjct: 1129 LLKTFNEPGSEYFIFLLSTRAGGLGLNLQ-SADTVIIFDSDWNPHQDLQA-----QDRAH 1182 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + G + V V L N+++E +L + K + ++ A Sbjct: 1183 RIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQA 1222 >gi|83772693|dbj|BAE62821.1| unnamed protein product [Aspergillus oryzae] Length = 867 Score = 84.6 bits (208), Expect = 8e-15, Method: Composition-based stats. Identities = 30/138 (21%), Positives = 50/138 (36%), Gaps = 17/138 (12%) Query: 66 ANAAPIIVAYHFNSDLARLQKAF----------PQGRTLDKDPCTIQEWN-EGKIPLLFA 114 +N ++V H L LQ F + + + E+N + + + Sbjct: 628 SNGDKVLVFSHSVRLLRMLQMLFHHTSYNVSYLDGSMSYEDRATAVDEFNSDPRQFVFLI 687 Query: 115 HPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQN 174 + G GLN+ N +V W+ Q R + G R V V+ LI+ Sbjct: 688 STRAGGVGLNIT-SANKVVVVDPNWNPSYDLQA-----QDRAYRIGQVRDVEVFRLISAG 741 Query: 175 TIDELVLQRLRTKSTIQD 192 TI+E+V R K + Sbjct: 742 TIEEIVYARQIYKQQQAN 759 >gi|192807314|ref|NP_001122317.1| transcription activator BRG1 isoform C [Homo sapiens] gi|167888964|gb|ACA09751.1| SMARCA4 isoform 2 [Homo sapiens] Length = 1617 Score = 84.6 bits (208), Expect = 8e-15, Method: Composition-based stats. Identities = 30/160 (18%), Positives = 62/160 (38%), Gaps = 20/160 (12%) Query: 52 HDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAF---------PQGRTLDKDPCT 100 K + L+ I+ +A +++ S + ++ F G T +D Sbjct: 1078 ASGKFELLDRILPKLRATNHKVLLFCQMTSLMTIMEDYFAYRGFKYLRLDGTTKAEDRGM 1137 Query: 101 I-QEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 + + +NE + + + G GLNLQ + ++ F W+ + Q R Sbjct: 1138 LLKTFNEPGSEYFIFLLSTRAGGLGLNLQ-SADTVIIFDSDWNPHQDLQA-----QDRAH 1191 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + G + V V L N+++E +L + K + ++ A Sbjct: 1192 RIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQA 1231 >gi|192807320|ref|NP_001122320.1| transcription activator BRG1 isoform F [Homo sapiens] gi|167888962|gb|ACA09750.1| SMARCA4 isoform 3 [Homo sapiens] Length = 1613 Score = 84.6 bits (208), Expect = 8e-15, Method: Composition-based stats. Identities = 30/160 (18%), Positives = 62/160 (38%), Gaps = 20/160 (12%) Query: 52 HDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAF---------PQGRTLDKDPCT 100 K + L+ I+ +A +++ S + ++ F G T +D Sbjct: 1078 ASGKFELLDRILPKLRATNHKVLLFCQMTSLMTIMEDYFAYRGFKYLRLDGTTKAEDRGM 1137 Query: 101 I-QEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 + + +NE + + + G GLNLQ + ++ F W+ + Q R Sbjct: 1138 LLKTFNEPGSEYFIFLLSTRAGGLGLNLQ-SADTVIIFDSDWNPHQDLQA-----QDRAH 1191 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + G + V V L N+++E +L + K + ++ A Sbjct: 1192 RIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQA 1231 >gi|192807318|ref|NP_001122319.1| transcription activator BRG1 isoform E [Homo sapiens] gi|119604573|gb|EAW84167.1| SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, isoform CRA_f [Homo sapiens] gi|167888968|gb|ACA09753.1| SMARCA4 isoform 1 [Homo sapiens] Length = 1614 Score = 84.6 bits (208), Expect = 8e-15, Method: Composition-based stats. Identities = 30/160 (18%), Positives = 62/160 (38%), Gaps = 20/160 (12%) Query: 52 HDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAF---------PQGRTLDKDPCT 100 K + L+ I+ +A +++ S + ++ F G T +D Sbjct: 1078 ASGKFELLDRILPKLRATNHKVLLFCQMTSLMTIMEDYFAYRGFKYLRLDGTTKAEDRGM 1137 Query: 101 I-QEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 + + +NE + + + G GLNLQ + ++ F W+ + Q R Sbjct: 1138 LLKTFNEPGSEYFIFLLSTRAGGLGLNLQ-SADTVIIFDSDWNPHQDLQA-----QDRAH 1191 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + G + V V L N+++E +L + K + ++ A Sbjct: 1192 RIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQA 1231 >gi|73986606|ref|XP_867722.1| PREDICTED: similar to SWI/SNF-related matrix-associated actin-dependent regulator of chromatin a4 isoform 7 [Canis familiaris] Length = 1598 Score = 84.6 bits (208), Expect = 8e-15, Method: Composition-based stats. Identities = 30/160 (18%), Positives = 62/160 (38%), Gaps = 20/160 (12%) Query: 52 HDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAF---------PQGRTLDKDPCT 100 K + L+ I+ +A +++ S + ++ F G T +D Sbjct: 1062 ASGKFELLDRILPKLRATNHKVLLFCQMTSLMTIMEDYFAYRGFKYLRLDGTTKAEDRGM 1121 Query: 101 I-QEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 + + +NE + + + G GLNLQ + ++ F W+ + Q R Sbjct: 1122 LLKTFNEPGSEYFIFLLSTRAGGLGLNLQ-SADTVIIFDSDWNPHQDLQA-----QDRAH 1175 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + G + V V L N+++E +L + K + ++ A Sbjct: 1176 RIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQA 1215 >gi|73986614|ref|XP_867761.1| PREDICTED: similar to SWI/SNF-related matrix-associated actin-dependent regulator of chromatin a4 isoform 11 [Canis familiaris] Length = 1602 Score = 84.6 bits (208), Expect = 8e-15, Method: Composition-based stats. Identities = 30/160 (18%), Positives = 62/160 (38%), Gaps = 20/160 (12%) Query: 52 HDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAF---------PQGRTLDKDPCT 100 K + L+ I+ +A +++ S + ++ F G T +D Sbjct: 1066 ASGKFELLDRILPKLRATNHKVLLFCQMTSLMTIMEDYFAYRGFKYLRLDGTTKAEDRGM 1125 Query: 101 I-QEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 + + +NE + + + G GLNLQ + ++ F W+ + Q R Sbjct: 1126 LLKTFNEPGSEYFIFLLSTRAGGLGLNLQ-SADTVIIFDSDWNPHQDLQA-----QDRAH 1179 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + G + V V L N+++E +L + K + ++ A Sbjct: 1180 RIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQA 1219 >gi|50418184|gb|AAH77717.1| CHD1L protein [Homo sapiens] Length = 693 Score = 84.6 bits (208), Expect = 8e-15, Method: Composition-based stats. Identities = 34/216 (15%), Positives = 79/216 (36%), Gaps = 33/216 (15%) Query: 1 MKQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYD-------EEKHWKEVHD 53 MK F+ E + ++ N S+ KC + +D E Sbjct: 91 MKDLDAFENET-----AKKVKLQNILSQLRKC---VDHPYLFDGVEPEPFEVGDHLTEAS 142 Query: 54 EKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAFP---------QGRTLDKDPC-TI 101 K+ L+ ++ + +++ L LQ G ++ I Sbjct: 143 GKLHLLDKLLAFLYSGGHRVLLFSQMTQMLDILQDYMDYRGYSYERVDGSVRGEERHLAI 202 Query: 102 QEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGF 161 + + + I + + G G+NL + ++F ++ + Q R + G Sbjct: 203 KNFGQQPIFVFLLSTRAGGVGMNLT-AADTVIFVDSDFNPQNDLQAAAR-----AHRIGQ 256 Query: 162 KRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 ++V V LI ++T++E+V ++ +K + ++++ Sbjct: 257 NKSVKVIRLIGRDTVEEIVYRKAASKLQLTNMIIEG 292 >gi|301060130|ref|ZP_07200997.1| SNF2 family N-terminal domain protein [delta proteobacterium NaphS2] gi|300445642|gb|EFK09540.1| SNF2 family N-terminal domain protein [delta proteobacterium NaphS2] Length = 691 Score = 84.6 bits (208), Expect = 8e-15, Method: Composition-based stats. Identities = 36/158 (22%), Positives = 67/158 (42%), Gaps = 21/158 (13%) Query: 52 HDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTL-----------DKDPCT 100 H K L +++ + ++V F + L + + + + DKD Sbjct: 479 HTSKTTRLLELLKVS-GEKVLVFSRFTATLEEIARRLSEEKVAYSLFHGGMGAADKDRA- 536 Query: 101 IQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 ++ + G P++ G G NLQ+ +V F L W+ + +Q I RI + G Sbjct: 537 VESFQNG-TPVMLCS-EIGGEGRNLQFCA-TMVNFDLPWNPMKIEQRIGRI-----HRIG 588 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNAL 198 R V VY L A NT + +L+ L + + +L++ + Sbjct: 589 QTRPVHVYNLCADNTAEHHILEVLDRRINLFELVIGEV 626 >gi|9802554|gb|AAF99756.1|AC003981_6 F22O13.8 [Arabidopsis thaliana] Length = 1471 Score = 84.6 bits (208), Expect = 8e-15, Method: Composition-based stats. Identities = 32/183 (17%), Positives = 64/183 (34%), Gaps = 36/183 (19%) Query: 49 KEVHDEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQ-------------KAFPQGR- 92 K+ L I+ + +V L ++ K + +G+ Sbjct: 1106 VSDFSGKMILLLDILSMSADVGDKALVFSQSIPTLDLIELYLSRVPRHGKQGKFWKKGKD 1165 Query: 93 --------TLDKDPCTIQEWNEGK---IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDL 141 + + +NE + + G+NL Y N ++ W+ Sbjct: 1166 WYRIDGKTESSERQKLVDRFNEPDNKRVKCTLISTRAGSLGINL-YAANRVIIVDGSWNP 1224 Query: 142 EEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 Q I R + G K+ VF Y L+A+ TI+E + +R TK + +++ ++ Sbjct: 1225 TYDLQAI-----FRAWRYGQKKPVFAYRLMARGTIEEKIYKRQVTKEGLAARVVD---RQ 1276 Query: 202 TIH 204 +H Sbjct: 1277 QVH 1279 >gi|332190192|gb|AEE28313.1| DEAD-like helicase domain-containing protein [Arabidopsis thaliana] Length = 1458 Score = 84.6 bits (208), Expect = 8e-15, Method: Composition-based stats. Identities = 32/183 (17%), Positives = 64/183 (34%), Gaps = 36/183 (19%) Query: 49 KEVHDEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQ-------------KAFPQGR- 92 K+ L I+ + +V L ++ K + +G+ Sbjct: 1089 VSDFSGKMILLLDILSMSADVGDKALVFSQSIPTLDLIELYLSRVPRHGKQGKFWKKGKD 1148 Query: 93 --------TLDKDPCTIQEWNEGK---IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDL 141 + + +NE + + G+NL Y N ++ W+ Sbjct: 1149 WYRIDGKTESSERQKLVDRFNEPDNKRVKCTLISTRAGSLGINL-YAANRVIIVDGSWNP 1207 Query: 142 EEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 Q I R + G K+ VF Y L+A+ TI+E + +R TK + +++ ++ Sbjct: 1208 TYDLQAI-----FRAWRYGQKKPVFAYRLMARGTIEEKIYKRQVTKEGLAARVVD---RQ 1259 Query: 202 TIH 204 +H Sbjct: 1260 QVH 1262 >gi|73986602|ref|XP_867703.1| PREDICTED: similar to SWI/SNF-related matrix-associated actin-dependent regulator of chromatin a4 isoform 5 [Canis familiaris] Length = 1595 Score = 84.6 bits (208), Expect = 8e-15, Method: Composition-based stats. Identities = 30/160 (18%), Positives = 62/160 (38%), Gaps = 20/160 (12%) Query: 52 HDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAF---------PQGRTLDKDPCT 100 K + L+ I+ +A +++ S + ++ F G T +D Sbjct: 1059 ASGKFELLDRILPKLRATNHKVLLFCQMTSLMTIMEDYFAYRGFKYLRLDGTTKAEDRGM 1118 Query: 101 I-QEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 + + +NE + + + G GLNLQ + ++ F W+ + Q R Sbjct: 1119 LLKTFNEPGSEYFIFLLSTRAGGLGLNLQ-SADTVIIFDSDWNPHQDLQA-----QDRAH 1172 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + G + V V L N+++E +L + K + ++ A Sbjct: 1173 RIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQA 1212 >gi|73986616|ref|XP_867769.1| PREDICTED: similar to SWI/SNF-related matrix-associated actin-dependent regulator of chromatin a4 isoform 12 [Canis familiaris] Length = 1600 Score = 84.6 bits (208), Expect = 8e-15, Method: Composition-based stats. Identities = 30/160 (18%), Positives = 62/160 (38%), Gaps = 20/160 (12%) Query: 52 HDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAF---------PQGRTLDKDPCT 100 K + L+ I+ +A +++ S + ++ F G T +D Sbjct: 1064 ASGKFELLDRILPKLRATNHKVLLFCQMTSLMTIMEDYFAYRGFKYLRLDGTTKAEDRGM 1123 Query: 101 I-QEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 + + +NE + + + G GLNLQ + ++ F W+ + Q R Sbjct: 1124 LLKTFNEPGSEYFIFLLSTRAGGLGLNLQ-SADTVIIFDSDWNPHQDLQA-----QDRAH 1177 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + G + V V L N+++E +L + K + ++ A Sbjct: 1178 RIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQA 1217 >gi|73986600|ref|XP_867692.1| PREDICTED: similar to SWI/SNF-related matrix-associated actin-dependent regulator of chromatin a4 isoform 4 [Canis familiaris] Length = 1603 Score = 84.6 bits (208), Expect = 8e-15, Method: Composition-based stats. Identities = 30/160 (18%), Positives = 62/160 (38%), Gaps = 20/160 (12%) Query: 52 HDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAF---------PQGRTLDKDPCT 100 K + L+ I+ +A +++ S + ++ F G T +D Sbjct: 1067 ASGKFELLDRILPKLRATNHKVLLFCQMTSLMTIMEDYFAYRGFKYLRLDGTTKAEDRGM 1126 Query: 101 I-QEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 + + +NE + + + G GLNLQ + ++ F W+ + Q R Sbjct: 1127 LLKTFNEPGSEYFIFLLSTRAGGLGLNLQ-SADTVIIFDSDWNPHQDLQA-----QDRAH 1180 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + G + V V L N+++E +L + K + ++ A Sbjct: 1181 RIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQA 1220 >gi|328769067|gb|EGF79112.1| hypothetical protein BATDEDRAFT_17244 [Batrachochytrium dendrobatidis JAM81] Length = 988 Score = 84.6 bits (208), Expect = 8e-15, Method: Composition-based stats. Identities = 40/223 (17%), Positives = 84/223 (37%), Gaps = 41/223 (18%) Query: 7 FQRELYCDLQGENIEAFNSAS-----------KTVKCLQLANGAVYYD--------EEKH 47 QR Y L ++I+A N A+ ++ + N +D Sbjct: 367 MQRMWYKRLLEKDIDAVNGAAGRKESKTRLQNIVMQLRKCCNHPYLFDGAEPGPPYTTDQ 426 Query: 48 WKEVHDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQ---------KAFPQGRTLDK 96 + K+ L+ +++ KA + +++ + L L+ G T + Sbjct: 427 HLVDNSGKMALLDKLLQHLKAQGSRVLLFSQMSRVLDILEDYCIWKEFDYCRLDGTTAHE 486 Query: 97 DP-CTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGV 153 D +I E+N+ + + G G+NL +I++ + W+ + + Sbjct: 487 DRINSIDEYNKPDSSKFIFLLTTRAGGLGINL-ATADIVIMYDNDWNPQV-------VTE 538 Query: 154 TRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 R + G K+ V ++ I +N I+E V+ R K + L++ Sbjct: 539 DRAHRIGQKKQVVIFRFITENAIEEKVIDRATQKLRLDQLVIQ 581 >gi|328709714|ref|XP_001947872.2| PREDICTED: ATP-dependent helicase brm-like [Acyrthosiphon pisum] Length = 1638 Score = 84.6 bits (208), Expect = 8e-15, Method: Composition-based stats. Identities = 25/115 (21%), Positives = 48/115 (41%), Gaps = 9/115 (7%) Query: 86 KAFPQGRTLDKDPCTI-QEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLE 142 G T +D + +++N + L + G GLNLQ + ++ F W+ Sbjct: 1174 YLRLDGTTKAEDRGDLLKKFNSAGSEYFLFLLSTRAGGLGLNLQ-AADTVIIFDSDWNPH 1232 Query: 143 EHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + Q R + G + V V L+ N+++E +L R K + + ++ A Sbjct: 1233 QDLQA-----QDRAHRIGQQNEVRVLRLMTVNSVEERILAAARYKLNMDEKVIQA 1282 >gi|237721132|ref|ZP_04551613.1| conserved hypothetical protein [Bacteroides sp. 2_2_4] gi|229449967|gb|EEO55758.1| conserved hypothetical protein [Bacteroides sp. 2_2_4] Length = 578 Score = 84.6 bits (208), Expect = 8e-15, Method: Composition-based stats. Identities = 42/202 (20%), Positives = 79/202 (39%), Gaps = 21/202 (10%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEV 61 K+Y + ++ L+ + K++ NGAV + + KIKA+ Sbjct: 366 KEYKAAEADMVKYLKKYKNASDEQVQKSM------NGAVMVQMQLLKQISARGKIKAVCE 419 Query: 62 IIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEW-------NEGKIPLL 112 + +I+ + +A L+K FP+ T+ Q+ N L+ Sbjct: 420 FVHDVIDGGEKLILFGYLKEVVAELKKEFPKAVTVTGSDSVNQKQYAVDSFQNNPDCKLI 479 Query: 113 FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIA 172 + S G GL L + + F W + +Q +R + G K V YY + Sbjct: 480 ILNFKSGGTGLTLT-AASRVAFIEFPWTFSDCEQAEDR-----AHRNGQKNNVNCYYFLG 533 Query: 173 QNTIDELVLQRLRTKSTIQDLL 194 ++TID+ + ++TK I + + Sbjct: 534 KDTIDKYMYDVIQTKKNIANGV 555 >gi|327263495|ref|XP_003216555.1| PREDICTED: putative DNA repair and recombination protein RAD26-like [Anolis carolinensis] Length = 756 Score = 84.6 bits (208), Expect = 8e-15, Method: Composition-based stats. Identities = 33/152 (21%), Positives = 63/152 (41%), Gaps = 19/152 (12%) Query: 53 DEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQK---------AFPQGRTLDKDP-CT 100 K+K L+ ++ + N +++ L L++ G T +D Sbjct: 496 SGKMKVLQKLLNHFRKNKDKVLLFSFSTKLLDVLEQYCMASGLDYRRLDGNTKAEDRVKI 555 Query: 101 IQEWNE-GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQA 159 ++E+N ++ + + G GLN G NI++ F W+ Q I+R + Sbjct: 556 VKEFNGMEEVNICLVSTMAGGLGLNF-VGANIVILFDPTWNPANDLQAIDR-----AYRI 609 Query: 160 GFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQ 191 G R V V+ LI+ T++E++ R K + Sbjct: 610 GQCRDVKVFRLISLGTVEEMMYLRQVYKQQLH 641 >gi|296807704|ref|XP_002844237.1| Fun30p [Arthroderma otae CBS 113480] gi|238843720|gb|EEQ33382.1| Fun30p [Arthroderma otae CBS 113480] Length = 1138 Score = 84.6 bits (208), Expect = 8e-15, Method: Composition-based stats. Identities = 33/155 (21%), Positives = 61/155 (39%), Gaps = 19/155 (12%) Query: 53 DEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFP---------QGRTLDKDPCTI 101 K+ L ++ AN I++ F + L++ G T +D +I Sbjct: 953 SGKVDKLCELLTNFIANGDRILIFSQFTMVMDILEQVLETQNIKFFRLDGTTSVEDRQSI 1012 Query: 102 -QEWNEG-KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQA 159 ++E IP+ + G G+NL N ++ F ++ +E Q R + Sbjct: 1013 LDAFHEQVDIPVFMLSTKAGGAGINL-ACANKVIIFDSSFNPQEDIQA-----ENRAHRV 1066 Query: 160 GFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 G R V V L+ + TI+E + +TK + + Sbjct: 1067 GQTREVEVVRLVTRGTIEEQIHALGQTKLALDQRV 1101 >gi|73949856|ref|XP_535304.2| PREDICTED: similar to chromodomain helicase DNA binding protein 9 isoform 1 [Canis familiaris] Length = 2903 Score = 84.6 bits (208), Expect = 8e-15, Method: Composition-based stats. Identities = 25/146 (17%), Positives = 51/146 (34%), Gaps = 18/146 (12%) Query: 65 KANAAPIIVAYHFNSDLARLQKAFPQGRTL----------DKDPCTIQEWNEGKIP--LL 112 KA +++ L L+ R L + I +++ + Sbjct: 1197 KAGGHKVLIFSQMVRCLDILEDYLIHKRYLYERIDGRVRGNLRQAAIDRFSKPDSDRFVF 1256 Query: 113 FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIA 172 + G G+NL + + F W+ + Q R + G +AV VY L+ Sbjct: 1257 LLCTRAGGLGINLT-AADTCIIFDSDWNPQNDLQAQARC-----HRIGQNKAVKVYRLVT 1310 Query: 173 QNTIDELVLQRLRTKSTIQDLLLNAL 198 +N+ + + R K + +L ++ Sbjct: 1311 RNSYEREMFDRASLKLGLDKAVLQSM 1336 >gi|308497953|ref|XP_003111163.1| CRE-TAG-192 protein [Caenorhabditis remanei] gi|308240711|gb|EFO84663.1| CRE-TAG-192 protein [Caenorhabditis remanei] Length = 2998 Score = 84.2 bits (207), Expect = 8e-15, Method: Composition-based stats. Identities = 30/168 (17%), Positives = 56/168 (33%), Gaps = 23/168 (13%) Query: 52 HDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQK----------AFPQGRTLDKDPC 99 K+ +E ++ K + +++ L L++ D Sbjct: 1533 ASGKVVLIEKLLPKLRKDGHKVLIFSQMVKVLDLLEEFLITMSYPFERIDGNVRGDLRQA 1592 Query: 100 TIQEW--NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 I + + + G G+NL + ++ F W+ + Q R Sbjct: 1593 AIDRFSKENSDRFVFLLCTRAGGLGINLT-AADTVIIFDSDWNPQNDLQAQARC-----H 1646 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN---ALKKET 202 + G K+ V VY LI NT + + + K + +L ALK E Sbjct: 1647 RIGQKKLVKVYRLITSNTYEREMFDKASLKLGLDKAVLQSTTALKAEG 1694 >gi|293372914|ref|ZP_06619283.1| SNF2 family N-terminal domain protein [Bacteroides ovatus SD CMC 3f] gi|298480929|ref|ZP_06999124.1| SNF2 family domain-containing protein [Bacteroides sp. D22] gi|292631982|gb|EFF50591.1| SNF2 family N-terminal domain protein [Bacteroides ovatus SD CMC 3f] gi|298272952|gb|EFI14518.1| SNF2 family domain-containing protein [Bacteroides sp. D22] Length = 578 Score = 84.2 bits (207), Expect = 8e-15, Method: Composition-based stats. Identities = 42/202 (20%), Positives = 79/202 (39%), Gaps = 21/202 (10%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEV 61 K+Y + ++ L+ + K++ NGAV + + KIKA+ Sbjct: 366 KEYKAAEADMVKYLKKYKNASDEQVQKSM------NGAVMVQMQLLKQISARGKIKAVCE 419 Query: 62 IIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEW-------NEGKIPLL 112 + +I+ + +A L+K FP+ T+ Q+ N L+ Sbjct: 420 FVHDVIDGGEKLILFGYLKEVVAELKKEFPKAVTVTGSDSVNQKQYAVDSFQNNPDCKLI 479 Query: 113 FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIA 172 + S G GL L + + F W + +Q +R + G K V YY + Sbjct: 480 ILNFKSGGTGLTLT-AASRVAFIEFPWTFSDCEQAEDR-----AHRNGQKNNVNCYYFLG 533 Query: 173 QNTIDELVLQRLRTKSTIQDLL 194 ++TID+ + ++TK I + + Sbjct: 534 KDTIDKYMYDVIQTKKNIANGV 555 >gi|212543509|ref|XP_002151909.1| DNA excision repair protein (Rad26L), putative [Penicillium marneffei ATCC 18224] gi|210066816|gb|EEA20909.1| DNA excision repair protein (Rad26L), putative [Penicillium marneffei ATCC 18224] Length = 1059 Score = 84.2 bits (207), Expect = 8e-15, Method: Composition-based stats. Identities = 31/138 (22%), Positives = 50/138 (36%), Gaps = 17/138 (12%) Query: 66 ANAAPIIVAYHFNSDLARLQKAF----------PQGRTLDKDPCTIQEWN-EGKIPLLFA 114 AN ++V H L LQ F + + + E+N + + + Sbjct: 640 ANGDKVLVFSHSVRLLKMLQMLFNHTSYNVSYLDGAMSYEDRAKVVDEFNSDPQQFVFLI 699 Query: 115 HPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQN 174 + G GLN+ N +V W+ Q R + G R V V+ LI+ Sbjct: 700 STRAGGVGLNI-VSANKVVVVDPNWNPSHDLQA-----QDRAYRIGQHRDVEVFRLISAG 753 Query: 175 TIDELVLQRLRTKSTIQD 192 TI+E+V R K + Sbjct: 754 TIEEIVYARQIYKQQQAN 771 >gi|33440456|gb|AAH56199.1| Smarca2 protein [Mus musculus] Length = 985 Score = 84.2 bits (207), Expect = 8e-15, Method: Composition-based stats. Identities = 31/160 (19%), Positives = 63/160 (39%), Gaps = 20/160 (12%) Query: 52 HDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAF---------PQGRTLDKDPCT 100 K + L+ I+ +A +++ S + ++ F G T +D Sbjct: 461 ASGKFELLDRILPKLRATNHRVLLFCQMTSLMTIMEDYFAFRNFLYLRLDGTTKSEDRAA 520 Query: 101 I-QEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 + +++NE + + + G GLNLQ + +V F W+ + Q R Sbjct: 521 LLKKFNEPGSQYFIFLLSTRAGGLGLNLQ-AADTVVIFDSDWNPHQDLQA-----QDRAH 574 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + G + V V L N+++E +L + K + ++ A Sbjct: 575 RIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQA 614 >gi|195430908|ref|XP_002063490.1| GK21938 [Drosophila willistoni] gi|194159575|gb|EDW74476.1| GK21938 [Drosophila willistoni] Length = 1564 Score = 84.2 bits (207), Expect = 8e-15, Method: Composition-based stats. Identities = 33/223 (14%), Positives = 77/223 (34%), Gaps = 38/223 (17%) Query: 5 HKFQRELYC----DLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEV---HDEKIK 57 + + + + NIEA A + + + + G D K++ + K++ Sbjct: 834 KQMETDFAASKIKQMNSINIEAAKKALRAKRNDEFSCGWA-VDLMKNYVSDQISNSPKME 892 Query: 58 ALEVIIEKAN--AAPIIVAYHFNSDLARLQKAFP--------------------QGRTL- 94 I++++ I++ L ++ G T Sbjct: 893 IFFTIMKESMLLGDRILLFSQSLLTLNSIEGFLKASYVPGSHELWTRNISYFRLDGSTSS 952 Query: 95 DKDPCTIQEWNEG-KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGV 153 + + E+N + L + G+NL G N ++ F W+ Q + RI Sbjct: 953 QERERLVNEFNSNSNVKLFLISTRAGSLGINLT-GANRVIIFDASWNPCHDTQAVYRI-- 1009 Query: 154 TRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + G + +VY ++ +++ + R K + D +++ Sbjct: 1010 ---YRYGQTKPCYVYRIVMDKCLEKKIYDRQIKKQGMSDRIVD 1049 >gi|239615480|gb|EEQ92467.1| SNF2 family helicase/ATPase [Ajellomyces dermatitidis ER-3] Length = 1091 Score = 84.2 bits (207), Expect = 9e-15, Method: Composition-based stats. Identities = 32/170 (18%), Positives = 64/170 (37%), Gaps = 20/170 (11%) Query: 41 YYDEEKHWKEVHDEKIKALEVIIEKANAAPI--IVAYHFNSDLARLQKAFPQGRT----- 93 Y K + + +E + + PI +V + S L ++ A Sbjct: 906 YEGPHTKTKALISHLLDTVEESKKAPDEPPIKSVVFSSWTSHLDLIEIALEDNGITTFTR 965 Query: 94 ------LDKDPCTIQEW-NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 L + + E+ + I +L A + G GLNL G + + ++ Q Sbjct: 966 LDGTMSLKQRNAALDEFRDNNDITVLLATLGAGGVGLNLTSGSRVYIM-EPQYNPAAIAQ 1024 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 ++R+ + G R V I +++I+E + + + K + D+ LN Sbjct: 1025 AVDRV-----HRLGQTREVTTIQFIMKDSIEEKIAELAKKKQQMADMSLN 1069 >gi|84996109|ref|XP_952776.1| DEAD-box family (SNF2-like) helicase [Theileria annulata strain Ankara] gi|65303773|emb|CAI76150.1| DEAD-box family (SNF2-like) helicase, putative [Theileria annulata] Length = 1165 Score = 84.2 bits (207), Expect = 9e-15, Method: Composition-based stats. Identities = 38/188 (20%), Positives = 72/188 (38%), Gaps = 32/188 (17%) Query: 1 MKQY-HKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKAL 59 +K Y +K ++LY + ++K K L+L + + E+ + + Sbjct: 999 LKNYINKINKKLYLE-----------STKIRKMLELISNIIKKKEKILIFSQFTNYLDII 1047 Query: 60 EVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASC 119 E I++ N PI+ TL + I+++N + +L Sbjct: 1048 EYIMKLENMKPIL--------------RLDGTVTLIEREKIIKKFNNEDVYILLISIKVG 1093 Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 GLNL N ++ W+ Q +R + G ++ V VY L +NTI+E Sbjct: 1094 NVGLNLSI-ANHVILMDQSWNPYNDIQAEDRC-----HRIGQQKIVHVYKLFVKNTIEEY 1147 Query: 180 VLQRLRTK 187 ++ + K Sbjct: 1148 IINQSYNK 1155 >gi|297843648|ref|XP_002889705.1| ATRX/CHR20 [Arabidopsis lyrata subsp. lyrata] gi|297335547|gb|EFH65964.1| ATRX/CHR20 [Arabidopsis lyrata subsp. lyrata] Length = 1483 Score = 84.2 bits (207), Expect = 9e-15, Method: Composition-based stats. Identities = 32/183 (17%), Positives = 64/183 (34%), Gaps = 36/183 (19%) Query: 49 KEVHDEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQ-------------KAFPQGR- 92 K+ L I+ + +V L ++ K + +G+ Sbjct: 1118 VSDFSGKMILLLDILSMSADVGDKALVFSQSIPTLDLIELYLSRVPRHGKQGKFWKKGKD 1177 Query: 93 --------TLDKDPCTIQEWNEGK---IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDL 141 + + +NE + + G+NL Y N ++ W+ Sbjct: 1178 WYRIDGKTESSERQKLVDRFNEPDNKRVKCTLISTRAGSLGINL-YAANRVIIVDGSWNP 1236 Query: 142 EEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 Q I R + G K+ VF Y L+A+ TI+E + +R TK + +++ ++ Sbjct: 1237 TYDLQAI-----FRAWRYGQKKPVFAYRLMARGTIEEKIYKRQVTKEGLAARVVD---RQ 1288 Query: 202 TIH 204 +H Sbjct: 1289 QVH 1291 >gi|242021061|ref|XP_002430965.1| hypothetical protein Phum_PHUM506220 [Pediculus humanus corporis] gi|212516185|gb|EEB18227.1| hypothetical protein Phum_PHUM506220 [Pediculus humanus corporis] Length = 687 Score = 84.2 bits (207), Expect = 9e-15, Method: Composition-based stats. Identities = 23/91 (25%), Positives = 41/91 (45%), Gaps = 6/91 (6%) Query: 108 KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFV 167 ++ L + G G+NL G N + F + W+ Q I RI + G + V Sbjct: 483 RLRLFLISTKAGGIGINLT-GANRAILFDVSWNPSHDTQSIFRI-----YRIGQNKPCHV 536 Query: 168 YYLIAQNTIDELVLQRLRTKSTIQDLLLNAL 198 Y +A T++E + +R K +I +++ L Sbjct: 537 YRFVASGTMEEKIYERQIMKQSISYRVVDEL 567 >gi|255943149|ref|XP_002562343.1| Pc18g05160 [Penicillium chrysogenum Wisconsin 54-1255] gi|211587076|emb|CAP94740.1| Pc18g05160 [Penicillium chrysogenum Wisconsin 54-1255] Length = 1022 Score = 84.2 bits (207), Expect = 9e-15, Method: Composition-based stats. Identities = 30/138 (21%), Positives = 49/138 (35%), Gaps = 17/138 (12%) Query: 66 ANAAPIIVAYHFNSDLARLQKAF----------PQGRTLDKDPCTIQEWNEG-KIPLLFA 114 +N +++ H L LQ F +L + E+N + + Sbjct: 616 SNGDKVLIFSHSVRLLKMLQMLFHHTSYNVSYLDGSMSLQDRAKAVDEFNADSRQFVFLI 675 Query: 115 HPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQN 174 + G GLN+ N +V W+ Q R + G R V V+ LI+ Sbjct: 676 STKAGGVGLNIT-SANKVVVVDPNWNPSYDLQA-----QDRAYRIGQLRDVEVFRLISAG 729 Query: 175 TIDELVLQRLRTKSTIQD 192 TI+E+V R K + Sbjct: 730 TIEEIVYARQIYKQQQAN 747 >gi|73986632|ref|XP_867832.1| PREDICTED: similar to SWI/SNF-related matrix-associated actin-dependent regulator of chromatin a4 isoform 20 [Canis familiaris] Length = 1589 Score = 84.2 bits (207), Expect = 9e-15, Method: Composition-based stats. Identities = 30/160 (18%), Positives = 62/160 (38%), Gaps = 20/160 (12%) Query: 52 HDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAF---------PQGRTLDKDPCT 100 K + L+ I+ +A +++ S + ++ F G T +D Sbjct: 1053 ASGKFELLDRILPKLRATNHKVLLFCQMTSLMTIMEDYFAYRGFKYLRLDGTTKAEDRGM 1112 Query: 101 I-QEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 + + +NE + + + G GLNLQ + ++ F W+ + Q R Sbjct: 1113 LLKTFNEPGSEYFIFLLSTRAGGLGLNLQ-SADTVIIFDSDWNPHQDLQA-----QDRAH 1166 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + G + V V L N+++E +L + K + ++ A Sbjct: 1167 RIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQA 1206 >gi|38566825|emb|CAE76132.1| related to helicase-DNA-binding protein [Neurospora crassa] Length = 1678 Score = 84.2 bits (207), Expect = 9e-15, Method: Composition-based stats. Identities = 28/161 (17%), Positives = 60/161 (37%), Gaps = 20/161 (12%) Query: 52 HDEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQ----------KAFPQGRTLDKDPC 99 K+ LEV++ K +++ F L L+ + ++ + Sbjct: 1051 ASSKLLLLEVMLPKLRERGHRVLIFSQFLDQLTILEDFLAGMDLPYQRLDGSQSSMEKQK 1110 Query: 100 TIQEWNEGKIPLL--FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 I +N L + G G+NL + ++ W+ + Q + R Sbjct: 1111 RIDAFNAPDSQLFCMLLSTRAGGVGINL-ATADTVIILDPDWNPHQDIQALSR-----AH 1164 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNAL 198 + G ++ V + L+ ++ +E +LQ R K + LL+ + Sbjct: 1165 RIGQQKKVLCFQLMTVDSAEEKILQIGRKKMALDHLLIETM 1205 >gi|170096925|ref|XP_001879682.1| SNF2 family DNA-dependent ATPase [Laccaria bicolor S238N-H82] gi|164645085|gb|EDR09333.1| SNF2 family DNA-dependent ATPase [Laccaria bicolor S238N-H82] Length = 984 Score = 84.2 bits (207), Expect = 9e-15, Method: Composition-based stats. Identities = 30/157 (19%), Positives = 55/157 (35%), Gaps = 19/157 (12%) Query: 52 HDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTLD-----------KDP 98 K+ AL +++ + I + S L ++ F + +D Sbjct: 792 PSTKMLALIDYLKEWESTGDKTICYSQWTSMLDLIETLFSRHGIRSLRFDGKMDRTSRDA 851 Query: 99 CTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQ 158 G ++ GLNL N +V L W+ Q +R + Sbjct: 852 TLASFKQIGGPKVILISTKCGSVGLNL-VSANRIVNMDLSWNYAAESQAYDRC-----HR 905 Query: 159 AGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 G ++ V V L+ +NTI+E +L+ K + + L Sbjct: 906 IGQEKTVHVKRLVVENTIEERMLKLQDVKVGLAEAAL 942 >gi|326382680|ref|ZP_08204371.1| ATP-dependent DNA helicase [Gordonia neofelifaecis NRRL B-59395] gi|326198799|gb|EGD55982.1| ATP-dependent DNA helicase [Gordonia neofelifaecis NRRL B-59395] Length = 571 Score = 84.2 bits (207), Expect = 9e-15, Method: Composition-based stats. Identities = 40/222 (18%), Positives = 70/222 (31%), Gaps = 43/222 (19%) Query: 6 KFQRELYCDLQGENI--------EAFNS------------ASKTVKCLQLANGAVYYDEE 45 K ++ CDL E +A N+ + + Q+ N E Sbjct: 324 KLHTDVECDLTDEQARIYDAILDDAENAGFGTGMARRGAILTALTRLKQVCNHPGLTGSE 383 Query: 46 KHWKEV---HDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQKAFPQ---------- 90 K+ I+E N +P +V + L Q Sbjct: 384 AVTAGDLSGRSGKLDVCTDIVESNLENDSPTVVFTQYRQTGELLAAHLGQVLGTDVPFLH 443 Query: 91 -GRTLDKDPCTIQEWNEGK-IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMI 148 G + + + ++ G +L A + G GL L + +V + WW+ Q Sbjct: 444 GGLSRAERDRIVDDYQAGAGCGVLIASLKAAGTGLTLTRAAD-VVHYDRWWNPAVEAQAT 502 Query: 149 ERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 +R+ + G R V V L T++E + KS + Sbjct: 503 DRV-----HRIGQDRIVTVTTLTTAGTLEEHIAAMHDRKSAL 539 >gi|242786879|ref|XP_002480891.1| DNA excision repair protein (Rad26L), putative [Talaromyces stipitatus ATCC 10500] gi|218721038|gb|EED20457.1| DNA excision repair protein (Rad26L), putative [Talaromyces stipitatus ATCC 10500] Length = 1052 Score = 84.2 bits (207), Expect = 9e-15, Method: Composition-based stats. Identities = 31/138 (22%), Positives = 50/138 (36%), Gaps = 17/138 (12%) Query: 66 ANAAPIIVAYHFNSDLARLQKAF----------PQGRTLDKDPCTIQEWN-EGKIPLLFA 114 AN ++V H L LQ F + + + E+N + + + Sbjct: 638 ANGDKVLVFSHSVRLLKMLQMLFNHTSYNVSYLDGAMSYEDRAKAVDEFNSDPQQFVFLI 697 Query: 115 HPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQN 174 + G GLN+ N +V W+ Q R + G R V V+ LI+ Sbjct: 698 STRAGGVGLNI-VSANKVVVVDPNWNPSHDLQA-----QDRAYRIGQHRDVEVFRLISAG 751 Query: 175 TIDELVLQRLRTKSTIQD 192 TI+E+V R K + Sbjct: 752 TIEEIVYARQIYKQQQAN 769 >gi|115643723|ref|XP_001199493.1| PREDICTED: similar to Smarca4 protein, partial [Strongylocentrotus purpuratus] gi|115665532|ref|XP_001186937.1| PREDICTED: similar to Smarca4 protein, partial [Strongylocentrotus purpuratus] Length = 642 Score = 84.2 bits (207), Expect = 9e-15, Method: Composition-based stats. Identities = 31/157 (19%), Positives = 57/157 (36%), Gaps = 20/157 (12%) Query: 55 KIKALEVIIEKAN--AAPIIVAYHFNSDLARLQKAFPQGRTL----------DKDPCTIQ 102 K + L+ I+ K I++ + + L+ F D +Q Sbjct: 54 KFELLDRILPKLKALGHRILLFCQMTTLMTILEDFFVYRGFKYLRLDGTTKADDRGILLQ 113 Query: 103 EWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 +NE P + + G GLNLQ + ++ F W+ + Q R + G Sbjct: 114 TFNEANCPYFIFMLSTRAGGLGLNLQT-ADTVILFDSDWNPHQDLQA-----QDRAHRIG 167 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 V V L+ +++E +L R K + ++ A Sbjct: 168 QVNEVRVLRLMTVQSVEEKILAAARWKMNMDSKIIQA 204 >gi|296195978|ref|XP_002745629.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1 isoform 1 [Callithrix jacchus] gi|296195980|ref|XP_002745630.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1 isoform 2 [Callithrix jacchus] Length = 1027 Score = 84.2 bits (207), Expect = 9e-15, Method: Composition-based stats. Identities = 30/157 (19%), Positives = 62/157 (39%), Gaps = 19/157 (12%) Query: 51 VHDEKIKALEVIIEKAN--AAPIIVAYHFNSDLARL---------QKAFPQGRT-LDKDP 98 + K + L I+ + +++ F L L + G+T + + Sbjct: 852 LDSGKFRVLGCILSELKQKGDRVVLFSQFTMMLDILEVLLKHHQHRYLRLDGKTQISERI 911 Query: 99 CTIQEWNEG-KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 I E+N I + + G G+NL N+++ + + +Q +R Sbjct: 912 HLIDEFNTDMDIFVFLLSTKAGGLGINLT-SANVVILHDIDCNPYNDKQAEDRC-----H 965 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 + G + V V LI+Q TI+E +L+ + K ++ + Sbjct: 966 RVGQTKEVLVIKLISQGTIEESMLKINQQKLKLEQDM 1002 >gi|261205042|ref|XP_002627258.1| SNF2 family protein [Ajellomyces dermatitidis SLH14081] gi|239592317|gb|EEQ74898.1| SNF2 family protein [Ajellomyces dermatitidis SLH14081] Length = 945 Score = 84.2 bits (207), Expect = 9e-15, Method: Composition-based stats. Identities = 38/162 (23%), Positives = 67/162 (41%), Gaps = 19/162 (11%) Query: 46 KHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFN-------SDLARLQKAF--PQGRTL 94 K+ + +H K+ L ++ + N +V F L LQ F G T Sbjct: 732 KNDEWMHSGKVDKLCELLTRFKENGDRTLVFSQFTMVMDILEHVLQTLQMRFFRLDGSTS 791 Query: 95 DKDPC-TIQEWNEG-KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIG 152 +D T+ ++E IP+ + G G+NL N ++ F ++ +E Q Sbjct: 792 VEDRQSTLDAFHEQVDIPVFLLSTKAGGAGINL-ACANKVIIFDSSFNPQEDVQA----- 845 Query: 153 VTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 R + G RAV V L+ ++TI+E + +TK + + Sbjct: 846 ENRAHRVGQTRAVEVVRLVTRDTIEEQMYALGQTKLALDQRV 887 >gi|241959098|ref|XP_002422268.1| probable ATP-dependent helicase, putative [Candida dubliniensis CD36] gi|223645613|emb|CAX40272.1| probable ATP-dependent helicase, putative [Candida dubliniensis CD36] Length = 1096 Score = 84.2 bits (207), Expect = 9e-15, Method: Composition-based stats. Identities = 35/165 (21%), Positives = 63/165 (38%), Gaps = 23/165 (13%) Query: 41 YYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQK---------AFPQG 91 Y D K + K L+ II +++ F L L++ A G Sbjct: 935 YLDSGKVIELG-----KILQQIIN-NKGEKVLIFSLFTQVLDILERVLSIFNYKFARLDG 988 Query: 92 RTLDKDPCT-IQEWNEGK-IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIE 149 T ++ I +N I + + G G+NL N ++ F ++ E +Q + Sbjct: 989 NTPVQERQDLIDLFNHDDNIHIFLISTKAGGVGINL-VAANHVIMFDQSFNPHEDKQAED 1047 Query: 150 RIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 R + G + V VY LI+ TI++ + R K + + + Sbjct: 1048 R-----AHRVGQTKEVKVYRLISDETIEKNIFSVARNKLELDEKI 1087 >gi|238499559|ref|XP_002381014.1| DNA excision repair protein (Rad26L), putative [Aspergillus flavus NRRL3357] gi|220692767|gb|EED49113.1| DNA excision repair protein (Rad26L), putative [Aspergillus flavus NRRL3357] Length = 882 Score = 84.2 bits (207), Expect = 9e-15, Method: Composition-based stats. Identities = 30/138 (21%), Positives = 50/138 (36%), Gaps = 17/138 (12%) Query: 66 ANAAPIIVAYHFNSDLARLQKAF----------PQGRTLDKDPCTIQEWN-EGKIPLLFA 114 +N ++V H L LQ F + + + E+N + + + Sbjct: 628 SNGDKVLVFSHSVRLLRMLQMLFHHTSYNVSYLDGSMSYEDRATAVDEFNSDPRQFVFLI 687 Query: 115 HPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQN 174 + G GLN+ N +V W+ Q R + G R V V+ LI+ Sbjct: 688 STRAGGVGLNIT-SANKVVVVDPNWNPSYDLQA-----QDRAYRIGQVRDVEVFRLISAG 741 Query: 175 TIDELVLQRLRTKSTIQD 192 TI+E+V R K + Sbjct: 742 TIEEIVYARQIYKQQQAN 759 >gi|195119131|ref|XP_002004085.1| GI19521 [Drosophila mojavensis] gi|193914660|gb|EDW13527.1| GI19521 [Drosophila mojavensis] Length = 1865 Score = 84.2 bits (207), Expect = 9e-15, Method: Composition-based stats. Identities = 30/120 (25%), Positives = 51/120 (42%), Gaps = 13/120 (10%) Query: 80 DLARLQKAFPQGRTLDKDPCTIQEWN---EGKIPLLFAHPASCGHGLNLQYGGNILVFFS 136 D RL P+ + I+ +N + + + G G+NL G N ++ Sbjct: 276 DYYRLDGKTPK----NIRHEMIKRFNSEANRRARVFLISAKAGGQGINLT-GANRVIILD 330 Query: 137 LWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 W+ QQ I RI + G K+ ++Y LIA T++E V R TK + +++ Sbjct: 331 TSWNPSNDQQNIFRIF-----RLGQKKNCYIYRLIAMGTMEEKVYSRSVTKQAMSFRVVD 385 >gi|329664188|ref|NP_001192361.1| SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1 [Bos taurus] gi|297475700|ref|XP_002688182.1| PREDICTED: KIAA1122 protein-like [Bos taurus] gi|296486709|gb|DAA28822.1| KIAA1122 protein-like [Bos taurus] Length = 1029 Score = 84.2 bits (207), Expect = 9e-15, Method: Composition-based stats. Identities = 30/157 (19%), Positives = 61/157 (38%), Gaps = 19/157 (12%) Query: 51 VHDEKIKALEVIIEKAN--AAPIIVAYHFNSDLARL---------QKAFPQGRT-LDKDP 98 + K + L I+ + +++ F L L + G+T + + Sbjct: 854 LDSGKFRVLGCILSELKQKGDRVVLFSQFTMMLDILEVLLKHHQHRYLRLDGKTQISERI 913 Query: 99 CTIQEWNEG-KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 I E+N I + + G G+NL N+++ + + +Q +R Sbjct: 914 HLIDEFNTDMDIFVFLLSTKAGGLGINLT-SANVVILHDIDCNPYNDKQAEDRC-----H 967 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 + G + V V LI Q TI+E +L+ + K ++ + Sbjct: 968 RVGQTKEVLVIKLIGQGTIEESMLKINQQKLKLEQDM 1004 >gi|125550862|gb|EAY96571.1| hypothetical protein OsI_18476 [Oryza sativa Indica Group] Length = 1157 Score = 84.2 bits (207), Expect = 9e-15, Method: Composition-based stats. Identities = 36/220 (16%), Positives = 80/220 (36%), Gaps = 35/220 (15%) Query: 6 KFQRELYCDLQGENIEAFNSASKTVKCLQLA-----------------NGAVYYDEEKHW 48 + Q++ Y L +++E N+ + + L +A G Y + Sbjct: 522 EMQKQYYRALLQKDLEVVNAGGERKRLLNIAMQLRKCCNHPYLFQGAEPGPPYTTGDHLI 581 Query: 49 KEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARL---------QKAFPQGRTLDKDP- 98 + + + K + +++ L L Q G T +D Sbjct: 582 ENAGKMVLLDKLLPKLKERDSRVLIFSQMTRLLDILEDYLMYKGYQYCRIDGNTGGEDRD 641 Query: 99 CTIQEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 +I+ +N+ + + + G G+NL ++++ + W+ + Q R Sbjct: 642 ASIEAFNKPGSEKFVFLLSTRAGGLGINL-ATADVVILYDSDWNPQVDLQA-----QDRA 695 Query: 157 RQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + G K+ V V+ + TI+E V++R K + L++ Sbjct: 696 HRIGQKKEVQVFRFCTEYTIEEKVIERAYKKLALDALVIQ 735 >gi|190358532|ref|NP_001121901.1| SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1 isoform a [Homo sapiens] gi|190358536|ref|NP_001121902.1| SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1 isoform a [Homo sapiens] gi|119626456|gb|EAX06051.1| SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1, isoform CRA_c [Homo sapiens] gi|168278811|dbj|BAG11285.1| SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1 [synthetic construct] Length = 1028 Score = 84.2 bits (207), Expect = 9e-15, Method: Composition-based stats. Identities = 30/157 (19%), Positives = 62/157 (39%), Gaps = 19/157 (12%) Query: 51 VHDEKIKALEVIIEKAN--AAPIIVAYHFNSDLARL---------QKAFPQGRT-LDKDP 98 + K + L I+ + +++ F L L + G+T + + Sbjct: 853 LDSGKFRVLGCILSELKQKGDRVVLFSQFTMMLDILEVLLKHHQHRYLRLDGKTQISERI 912 Query: 99 CTIQEWNEG-KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 I E+N I + + G G+NL N+++ + + +Q +R Sbjct: 913 HLIDEFNTDMDIFVFLLSTKAGGLGINLT-SANVVILHDIDCNPYNDKQAEDRC-----H 966 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 + G + V V LI+Q TI+E +L+ + K ++ + Sbjct: 967 RVGQTKEVLVIKLISQGTIEESMLKINQQKLKLEQDM 1003 >gi|326934975|ref|XP_003213557.1| PREDICTED: probable global transcription activator SNF2L2-like, partial [Meleagris gallopavo] Length = 232 Score = 84.2 bits (207), Expect = 9e-15, Method: Composition-based stats. Identities = 30/160 (18%), Positives = 63/160 (39%), Gaps = 20/160 (12%) Query: 52 HDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAF---------PQGRTLDKDPCT 100 K + L+ I+ +A +++ S + ++ F G T +D Sbjct: 22 ASGKFELLDRILPKLRATNHRVLLFCQMTSLMTIMEDYFAFRNFLYLRLDGTTKSEDRAA 81 Query: 101 I-QEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 + +++NE + + + G GLNLQ + ++ F W+ + Q R Sbjct: 82 LLKKFNEPGSQYFIFLLSTRAGGLGLNLQ-AADTVIIFDSDWNPHQDLQA-----QDRAH 135 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + G + V V L N+++E +L + K + ++ A Sbjct: 136 RIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQA 175 >gi|189190492|ref|XP_001931585.1| helicase SWR1 [Pyrenophora tritici-repentis Pt-1C-BFP] gi|187973191|gb|EDU40690.1| helicase SWR1 [Pyrenophora tritici-repentis Pt-1C-BFP] Length = 1030 Score = 84.2 bits (207), Expect = 9e-15, Method: Composition-based stats. Identities = 19/130 (14%), Positives = 44/130 (33%), Gaps = 17/130 (13%) Query: 72 IVAYHFNSDLARLQKAFPQGR----------TLDKDPCTIQEW-NEGKIPLLFAHPASCG 120 IV F S L ++ + T + +I + + + + G Sbjct: 880 IVFSQFTSMLQLIEWRLRRAGFNTVMLDGSMTPAQRQKSIDHFMTNPDVEVFLVSLKAGG 939 Query: 121 HGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELV 180 LNL + + WW+ Q +R + G +R + L +++++ + Sbjct: 940 VALNLTEASRVFI-VDPWWNPAAEWQSADRC-----HRIGQRRPCVITRLCVEDSVESRM 993 Query: 181 LQRLRTKSTI 190 + K+ + Sbjct: 994 VALQEKKAAM 1003 >gi|297293034|ref|XP_002804185.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1-like isoform 1 [Macaca mulatta] gi|297293036|ref|XP_002804186.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1-like isoform 2 [Macaca mulatta] Length = 1028 Score = 84.2 bits (207), Expect = 9e-15, Method: Composition-based stats. Identities = 30/157 (19%), Positives = 62/157 (39%), Gaps = 19/157 (12%) Query: 51 VHDEKIKALEVIIEKAN--AAPIIVAYHFNSDLARL---------QKAFPQGRT-LDKDP 98 + K + L I+ + +++ F L L + G+T + + Sbjct: 853 LDSGKFRVLGCILSELKQKGDRVVLFSQFTMMLDILEVLLKHHQHRYLRLDGKTQISERI 912 Query: 99 CTIQEWNEG-KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 I E+N I + + G G+NL N+++ + + +Q +R Sbjct: 913 HLIDEFNTDMDIFVFLLSTKAGGLGINLT-SANVVILHDIDCNPYNDKQAEDRC-----H 966 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 + G + V V LI+Q TI+E +L+ + K ++ + Sbjct: 967 RVGQTKEVLVIKLISQGTIEESMLKINQQKLKLEQDM 1003 >gi|261199416|ref|XP_002626109.1| SNF2 family helicase/ATPase [Ajellomyces dermatitidis SLH14081] gi|239594317|gb|EEQ76898.1| SNF2 family helicase/ATPase [Ajellomyces dermatitidis SLH14081] Length = 1090 Score = 84.2 bits (207), Expect = 9e-15, Method: Composition-based stats. Identities = 32/170 (18%), Positives = 64/170 (37%), Gaps = 20/170 (11%) Query: 41 YYDEEKHWKEVHDEKIKALEVIIEKANAAPI--IVAYHFNSDLARLQKAFPQGRT----- 93 Y K + + +E + + PI +V + S L ++ A Sbjct: 905 YEGPHTKTKALISHLLDTVEESKKAPDEPPIKSVVFSSWTSHLDLIEIALEDNGITTFTR 964 Query: 94 ------LDKDPCTIQEW-NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 L + + E+ + I +L A + G GLNL G + + ++ Q Sbjct: 965 LDGTMSLKQRNAALDEFRDNNDITVLLATLGAGGVGLNLTSGSRVYIM-EPQYNPAAIAQ 1023 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 ++R+ + G R V I +++I+E + + + K + D+ LN Sbjct: 1024 AVDRV-----HRLGQTREVTTIQFIMKDSIEEKIAELAKKKQQMADMSLN 1068 >gi|190358534|ref|NP_064544.2| SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1 isoform b [Homo sapiens] gi|306526240|sp|Q9H4L7|SMRCD_HUMAN RecName: Full=SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1; AltName: Full=ATP-dependent helicase 1; Short=hHEL1 gi|119626455|gb|EAX06050.1| SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1, isoform CRA_b [Homo sapiens] Length = 1026 Score = 84.2 bits (207), Expect = 9e-15, Method: Composition-based stats. Identities = 30/157 (19%), Positives = 62/157 (39%), Gaps = 19/157 (12%) Query: 51 VHDEKIKALEVIIEKAN--AAPIIVAYHFNSDLARL---------QKAFPQGRT-LDKDP 98 + K + L I+ + +++ F L L + G+T + + Sbjct: 851 LDSGKFRVLGCILSELKQKGDRVVLFSQFTMMLDILEVLLKHHQHRYLRLDGKTQISERI 910 Query: 99 CTIQEWNEG-KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 I E+N I + + G G+NL N+++ + + +Q +R Sbjct: 911 HLIDEFNTDMDIFVFLLSTKAGGLGINLT-SANVVILHDIDCNPYNDKQAEDRC-----H 964 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 + G + V V LI+Q TI+E +L+ + K ++ + Sbjct: 965 RVGQTKEVLVIKLISQGTIEESMLKINQQKLKLEQDM 1001 >gi|300176297|emb|CBK23608.2| unnamed protein product [Blastocystis hominis] Length = 943 Score = 84.2 bits (207), Expect = 9e-15, Method: Composition-based stats. Identities = 29/176 (16%), Positives = 61/176 (34%), Gaps = 25/176 (14%) Query: 32 CLQLANGAVYYDEEKHWKEVHD-EKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQ 90 QL+ A+Y K V ++ ++ +IV + L L + F + Sbjct: 474 LRQLSEEALYAYGNKLSVVVPLVARL--------RSEGNRVIVFARYLKMLLILDECFQR 525 Query: 91 GRT----------LDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWD 140 L++ + + + +L + G G+ + + +V W+ Sbjct: 526 RGIRTIHYNGMLGLEQRAAALAAFKQSGSGVLLITVGAGGEGITVTE-ADRIVLLDPNWN 584 Query: 141 LEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 +Q I+R + G + V VY + TI+E + R K + ++ Sbjct: 585 PTVDEQAIDR-----AYRIGQTKNVIVYRCVTCGTIEEKMYARQVWKQCLNKKVIE 635 >gi|297707107|ref|XP_002830358.1| PREDICTED: chromodomain-helicase-DNA-binding protein 6-like [Pongo abelii] Length = 2499 Score = 84.2 bits (207), Expect = 9e-15, Method: Composition-based stats. Identities = 25/149 (16%), Positives = 52/149 (34%), Gaps = 18/149 (12%) Query: 66 ANAAPIIVAYHFNSDLARLQKAFPQGR-TLDK---------DPCTIQEWNEGKIP--LLF 113 A +++ L L+ Q R T ++ I + + + Sbjct: 775 AGGHKVLIFSQMVRCLDILEDYLIQRRYTYERIDGRVRGNLRQAAIDRFCKPDSDRFVFL 834 Query: 114 AHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQ 173 + G G+NL + + F W+ + Q R + G +AV VY LI + Sbjct: 835 LCTRAGGLGINLT-AADTCIIFDSDWNPQNDLQAQARC-----HRIGQSKAVKVYRLITR 888 Query: 174 NTIDELVLQRLRTKSTIQDLLLNALKKET 202 N+ + + + K + +L + ++ Sbjct: 889 NSYEREMFDKASLKLGLDKAVLQDINRKG 917 >gi|114595202|ref|XP_517348.2| PREDICTED: SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1 isoform 3 [Pan troglodytes] gi|114595204|ref|XP_001163670.1| PREDICTED: SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1 isoform 2 [Pan troglodytes] gi|10944338|gb|AAG16639.1| helicase SMARCAD1 [Homo sapiens] Length = 1026 Score = 84.2 bits (207), Expect = 9e-15, Method: Composition-based stats. Identities = 30/157 (19%), Positives = 62/157 (39%), Gaps = 19/157 (12%) Query: 51 VHDEKIKALEVIIEKAN--AAPIIVAYHFNSDLARL---------QKAFPQGRT-LDKDP 98 + K + L I+ + +++ F L L + G+T + + Sbjct: 851 LDSGKFRVLGCILSELKQKGDRVVLFSQFTMMLDILEVLLKHHQHRYLRLDGKTQISERI 910 Query: 99 CTIQEWNEG-KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 I E+N I + + G G+NL N+++ + + +Q +R Sbjct: 911 HLIDEFNTDMDIFVFLLSTKAGGLGINLT-SANVVILHDIDCNPYNDKQAEDRC-----H 964 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 + G + V V LI+Q TI+E +L+ + K ++ + Sbjct: 965 RVGQTKEVLVIKLISQGTIEESMLKINQQKLKLEQDM 1001 >gi|301758964|ref|XP_002915331.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1-like [Ailuropoda melanoleuca] Length = 1027 Score = 84.2 bits (207), Expect = 9e-15, Method: Composition-based stats. Identities = 30/157 (19%), Positives = 62/157 (39%), Gaps = 19/157 (12%) Query: 51 VHDEKIKALEVIIEKAN--AAPIIVAYHFNSDLARL---------QKAFPQGRT-LDKDP 98 + K + L I+ + +++ F L L + G+T + + Sbjct: 852 LDSGKFRVLGCILSELKQKGDRVVLFSQFTMMLDILEVLLKHHQHRYLRLDGKTQISERI 911 Query: 99 CTIQEWNEG-KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 I E+N I + + G G+NL N+++ + + +Q +R Sbjct: 912 HLIDEFNTDMDIFVFLLSTKAGGLGINLT-SANVVILHDIDCNPYNDKQAEDRC-----H 965 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 + G + V V LI+Q TI+E +L+ + K ++ + Sbjct: 966 RVGQTKEVLVIKLISQGTIEESMLKINQQKLKLEQDM 1002 >gi|73986634|ref|XP_867838.1| PREDICTED: similar to SWI/SNF-related matrix-associated actin-dependent regulator of chromatin a4 isoform 21 [Canis familiaris] Length = 1605 Score = 84.2 bits (207), Expect = 9e-15, Method: Composition-based stats. Identities = 30/160 (18%), Positives = 62/160 (38%), Gaps = 20/160 (12%) Query: 52 HDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAF---------PQGRTLDKDPCT 100 K + L+ I+ +A +++ S + ++ F G T +D Sbjct: 1069 ASGKFELLDRILPKLRATNHKVLLFCQMTSLMTIMEDYFAYRGFKYLRLDGTTKAEDRGM 1128 Query: 101 I-QEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 + + +NE + + + G GLNLQ + ++ F W+ + Q R Sbjct: 1129 LLKTFNEPGSEYFIFLLSTRAGGLGLNLQ-SADTVIIFDSDWNPHQDLQA-----QDRAH 1182 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + G + V V L N+++E +L + K + ++ A Sbjct: 1183 RIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQA 1222 >gi|73986630|ref|XP_867824.1| PREDICTED: similar to SWI/SNF-related matrix-associated actin-dependent regulator of chromatin a4 isoform 19 [Canis familiaris] Length = 1596 Score = 84.2 bits (207), Expect = 9e-15, Method: Composition-based stats. Identities = 30/160 (18%), Positives = 62/160 (38%), Gaps = 20/160 (12%) Query: 52 HDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAF---------PQGRTLDKDPCT 100 K + L+ I+ +A +++ S + ++ F G T +D Sbjct: 1060 ASGKFELLDRILPKLRATNHKVLLFCQMTSLMTIMEDYFAYRGFKYLRLDGTTKAEDRGM 1119 Query: 101 I-QEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 + + +NE + + + G GLNLQ + ++ F W+ + Q R Sbjct: 1120 LLKTFNEPGSEYFIFLLSTRAGGLGLNLQ-SADTVIIFDSDWNPHQDLQA-----QDRAH 1173 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + G + V V L N+++E +L + K + ++ A Sbjct: 1174 RIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQA 1213 >gi|168702299|ref|ZP_02734576.1| helicase, Snf2 family protein [Gemmata obscuriglobus UQM 2246] Length = 763 Score = 84.2 bits (207), Expect = 1e-14, Method: Composition-based stats. Identities = 39/201 (19%), Positives = 73/201 (36%), Gaps = 24/201 (11%) Query: 7 FQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKA 66 Q+ DL + I + V + + YD++ DE + + ++ Sbjct: 464 LQKNYLTDLDRKRI-----LASLVNLRTICDSLFLYDKQTRVSPKLDEFAELVPELVS-- 516 Query: 67 NAAPIIVAYHFNSD-------LARLQ--KAFPQGRTLDKDPCTI-QEWNEGKIPLLFAHP 116 ++V + + L RL G K+ + + + +F Sbjct: 517 -DHKLVVFSQWETMAMEAAKVLDRLGVGYVLLHGGLPGKERKAVLERFQADAACKVFLST 575 Query: 117 ASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTI 176 + G GLNLQ + +V L W+ +Q I R+ + G R V V + + TI Sbjct: 576 DAGGTGLNLQM-ADTVVNLELPWNPAVLEQRIARV-----HRMGQNRPVRVINFVTRGTI 629 Query: 177 DELVLQRLRTKSTIQDLLLNA 197 +E VL+ + +K + L Sbjct: 630 EERVLRTVESKQALFAGLFAG 650 >gi|149238518|ref|XP_001525135.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL YB-4239] gi|146450628|gb|EDK44884.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL YB-4239] Length = 421 Score = 84.2 bits (207), Expect = 1e-14, Method: Composition-based stats. Identities = 30/160 (18%), Positives = 65/160 (40%), Gaps = 20/160 (12%) Query: 51 VHDEKIKALEVIIEK---ANAAPIIVAYHFNSDLARLQK----------AFPQGRTLDKD 97 + KIK LE I++ +++ F L L++ G +++ Sbjct: 236 LDSGKIKTLESILKTIIVERREKVLIFSLFTQMLDILEQVLSVFKYKFVRLDGGTRVEER 295 Query: 98 PCTIQEW-NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 TI + + IP+ + G G+NL N ++ + ++ + +Q +R Sbjct: 296 QETIDLFYQDDSIPVFLLSTKAGGFGINL-VAANNVISYDQSFNPHDDKQAEDR-----A 349 Query: 157 RQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + G K+ V VY L++ TI+ ++ + K + + + Sbjct: 350 HRVGQKKEVTVYKLVSDKTIEINMMMLAQNKLQLDASMSD 389 >gi|119603201|gb|EAW82795.1| chromodomain helicase DNA binding protein 9, isoform CRA_c [Homo sapiens] Length = 2349 Score = 84.2 bits (207), Expect = 1e-14, Method: Composition-based stats. Identities = 25/146 (17%), Positives = 51/146 (34%), Gaps = 18/146 (12%) Query: 65 KANAAPIIVAYHFNSDLARLQKAFPQGRTL----------DKDPCTIQEWNEGKIP--LL 112 KA +++ L L+ R L + I +++ + Sbjct: 663 KAGGHKVLIFSQMVRCLDILEDYLIHKRYLYERIDGRVRGNLRQAAIDRFSKPDSDRFVF 722 Query: 113 FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIA 172 + G G+NL + + F W+ + Q R + G +AV VY L+ Sbjct: 723 LLCTRAGGLGINLT-AADTCIIFDSDWNPQNDLQAQARC-----HRIGQNKAVKVYRLVT 776 Query: 173 QNTIDELVLQRLRTKSTIQDLLLNAL 198 +N+ + + R K + +L ++ Sbjct: 777 RNSYEREMFDRASLKLGLDKAVLQSM 802 >gi|148807359|gb|ABR13433.1| putative DNA helicase [Pseudomonas aeruginosa] Length = 657 Score = 84.2 bits (207), Expect = 1e-14, Method: Composition-based stats. Identities = 33/154 (21%), Positives = 58/154 (37%), Gaps = 18/154 (11%) Query: 55 KIKALEVIIEKANAA-PIIVAYHFNSDLARLQKAFPQGRT----------LDKDPCTIQE 103 K++ ++ + +A +I+ F +A L++ Q L K I Sbjct: 493 KVRVAMDLLSELDAEDKVILFCEFKPTVAALKELCEQAGLGCVTLVGNDSLTKRQKAIDR 552 Query: 104 WN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFK 162 + + + A+ G G NL N + F L W + +Q +R + G Sbjct: 553 FQQDPDCRVFICTTAAAGTGNNLT-AANYVFFLGLPWTPGQQEQAEDR-----AYRNGQL 606 Query: 163 RAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 R V V + + TIDE + Q L K + L+ Sbjct: 607 RMVVVKIPLVEGTIDEQLWQLLNAKRQVAQDLIE 640 >gi|312599275|gb|ADQ91298.1| hypothetical protein BpV2_131 [Bathycoccus sp. RCC1105 virus BpV2] Length = 478 Score = 84.2 bits (207), Expect = 1e-14, Method: Composition-based stats. Identities = 31/168 (18%), Positives = 68/168 (40%), Gaps = 21/168 (12%) Query: 50 EVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQK-------AFPQGRTLDKDPCTIQ 102 E +K++ L +I + +V F ++ + + + + ++ Sbjct: 296 EGRSKKMETLFKLISEHPDEKTLVFCQFKQEMDYIHENLSCPVFRIDGSVSKEDREKQLK 355 Query: 103 EWNE-GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGF 161 +NE + +L + G GLN+Q + + F + W+ Q I R ++G Sbjct: 356 LFNEAPQNSVLLIQVKAGGQGLNIQC-ASRIYFTAPCWNPATELQAIGR-----AHRSGQ 409 Query: 162 KRAVFVYYLIAQNT-----IDELVLQRLRTKSTIQDLLL--NALKKET 202 KR V+V L+ +T +++ ++ KS + +L + LK + Sbjct: 410 KRTVYVKKLVYGDTPGYPSVEQAMIALQGHKSLLSAEVLRDDRLKTQI 457 >gi|73986626|ref|XP_867807.1| PREDICTED: similar to SWI/SNF-related matrix-associated actin-dependent regulator of chromatin a4 isoform 17 [Canis familiaris] Length = 1579 Score = 84.2 bits (207), Expect = 1e-14, Method: Composition-based stats. Identities = 30/160 (18%), Positives = 62/160 (38%), Gaps = 20/160 (12%) Query: 52 HDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAF---------PQGRTLDKDPCT 100 K + L+ I+ +A +++ S + ++ F G T +D Sbjct: 1043 ASGKFELLDRILPKLRATNHKVLLFCQMTSLMTIMEDYFAYRGFKYLRLDGTTKAEDRGM 1102 Query: 101 I-QEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 + + +NE + + + G GLNLQ + ++ F W+ + Q R Sbjct: 1103 LLKTFNEPGSEYFIFLLSTRAGGLGLNLQ-SADTVIIFDSDWNPHQDLQA-----QDRAH 1156 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + G + V V L N+++E +L + K + ++ A Sbjct: 1157 RIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQA 1196 >gi|327355140|gb|EGE83997.1| SNF2 family helicase/ATPase [Ajellomyces dermatitidis ATCC 18188] Length = 1091 Score = 84.2 bits (207), Expect = 1e-14, Method: Composition-based stats. Identities = 32/170 (18%), Positives = 64/170 (37%), Gaps = 20/170 (11%) Query: 41 YYDEEKHWKEVHDEKIKALEVIIEKANAAPI--IVAYHFNSDLARLQKAFPQGRT----- 93 Y K + + +E + + PI +V + S L ++ A Sbjct: 906 YEGPHTKTKALISHLLDTVEESKKAPDEPPIKSVVFSSWTSHLDLIEIALEDNGITTFTR 965 Query: 94 ------LDKDPCTIQEW-NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 L + + E+ + I +L A + G GLNL G + + ++ Q Sbjct: 966 LDGTMSLKQRNAALDEFRDNNDITVLLATLGAGGVGLNLTSGSRVYIM-EPQYNPAAIAQ 1024 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 ++R+ + G R V I +++I+E + + + K + D+ LN Sbjct: 1025 AVDRV-----HRLGQTREVTTIQFIMKDSIEEKIAELAKKKQQMADMSLN 1069 >gi|296810938|ref|XP_002845807.1| CHR9/SNF2/SWI2 [Arthroderma otae CBS 113480] gi|238843195|gb|EEQ32857.1| CHR9/SNF2/SWI2 [Arthroderma otae CBS 113480] Length = 1011 Score = 84.2 bits (207), Expect = 1e-14, Method: Composition-based stats. Identities = 27/137 (19%), Positives = 49/137 (35%), Gaps = 17/137 (12%) Query: 67 NAAPIIVAYHFNSDLARLQKAF----------PQGRTLDKDPCTIQEWN-EGKIPLLFAH 115 N +++ H L LQ F + ++ + +N + + + Sbjct: 624 NGDKVLIFSHNVRLLKMLQMLFNHTSYNVSYLDGAMSYEERANVVNSFNSDPRQFVFLIS 683 Query: 116 PASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNT 175 + G GLN+ N +V W+ Q R + G R V V+ L++ T Sbjct: 684 TKAGGVGLNIT-SANKVVVVDPNWNPSYDLQA-----QDRAYRIGQLRDVEVFRLVSAGT 737 Query: 176 IDELVLQRLRTKSTIQD 192 I+E+V R K + Sbjct: 738 IEEIVYARQIYKQQQAN 754 >gi|325179496|emb|CCA13893.1| conserved hypothetical protein [Albugo laibachii Nc14] Length = 1697 Score = 84.2 bits (207), Expect = 1e-14, Method: Composition-based stats. Identities = 33/175 (18%), Positives = 62/175 (35%), Gaps = 37/175 (21%) Query: 52 HDEKIKALEVIIEKANA------------------APIIVAYHFNSDLARLQKAFPQ--- 90 H K AL ++ A ++ H L ++ F + Sbjct: 1454 HSGKFTALRDLLHDACGFSSDDNDQDETEPSLSPTHRCLIFSHLQETLDYVEHMFEECFP 1513 Query: 91 ----GRTLDKDPCTI-----QEWNE-GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWD 140 R ++ + +NE I +L + G GL L G + ++F W+ Sbjct: 1514 RLTYTRLRSTLTNSVFHEKCRNFNEDPSIDILLLTTSIGGLGLTLT-GADTVIFLEHSWN 1572 Query: 141 LEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 Q ++R + G ++V V+ LI QNT++E +L K + ++ Sbjct: 1573 PFVDLQAMDR-----AHRLGQTKSVRVFRLIMQNTLEEEILNLQSFKQQVASSVI 1622 >gi|302913263|ref|XP_003050881.1| SNF2 superfamily RAD26-like protein [Nectria haematococca mpVI 77-13-4] gi|256731819|gb|EEU45168.1| SNF2 superfamily RAD26-like protein [Nectria haematococca mpVI 77-13-4] Length = 1020 Score = 84.2 bits (207), Expect = 1e-14, Method: Composition-based stats. Identities = 28/138 (20%), Positives = 48/138 (34%), Gaps = 17/138 (12%) Query: 66 ANAAPIIVAYHFNSDLARLQKAFPQGR----------TLDKDPCTIQEWNEGKIP-LLFA 114 +N ++V H L LQ F + ++ + +N + Sbjct: 563 SNGDKVLVFSHSVRLLRILQHLFTNTSYTVSYLDGSLSYEQRQEVVDTFNSDPTQFVFLI 622 Query: 115 HPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQN 174 + G GLN+ N +V W+ Q R + G R V V+ LI+ Sbjct: 623 STKAGGVGLNIT-SANKVVIIDPHWNPSYDLQA-----QDRAYRIGQTRDVEVFRLISLG 676 Query: 175 TIDELVLQRLRTKSTIQD 192 T++E+V R K + Sbjct: 677 TVEEIVYARQIYKQQQAN 694 >gi|148667386|gb|EDK99802.1| mCG144495 [Mus musculus] Length = 680 Score = 84.2 bits (207), Expect = 1e-14, Method: Composition-based stats. Identities = 19/136 (13%), Positives = 46/136 (33%), Gaps = 18/136 (13%) Query: 67 NAAPIIVAYHFNSDLARLQ----------KAFPQGRTLDKDPCTIQEWNEG--KIPLLFA 114 +++ L L+ + G T + I +N + Sbjct: 452 GGHRVLIFSQMTKMLDLLEDFLEHEGYKYERIDGGITGNMRQEAIDRFNAPGAQQFCFLL 511 Query: 115 HPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQN 174 + G G+NL + ++ + W+ Q +R + G + V +Y + + Sbjct: 512 STRAGGLGINL-ATADTVIIYDSDWNPHNDIQA-----FSRAHRIGQNKKVMIYRFVTRA 565 Query: 175 TIDELVLQRLRTKSTI 190 +++E + Q + K + Sbjct: 566 SVEERITQVAKKKMML 581 >gi|115462129|ref|NP_001054664.1| Os05g0150300 [Oryza sativa Japonica Group] gi|54291826|gb|AAV32194.1| putative ATPase [Oryza sativa Japonica Group] gi|113578215|dbj|BAF16578.1| Os05g0150300 [Oryza sativa Japonica Group] gi|222630218|gb|EEE62350.1| hypothetical protein OsJ_17139 [Oryza sativa Japonica Group] Length = 1158 Score = 84.2 bits (207), Expect = 1e-14, Method: Composition-based stats. Identities = 36/220 (16%), Positives = 80/220 (36%), Gaps = 35/220 (15%) Query: 6 KFQRELYCDLQGENIEAFNSASKTVKCLQLA-----------------NGAVYYDEEKHW 48 + Q++ Y L +++E N+ + + L +A G Y + Sbjct: 523 EMQKQYYRALLQKDLEVVNAGGERKRLLNIAMQLRKCCNHPYLFQGAEPGPPYTTGDHLI 582 Query: 49 KEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARL---------QKAFPQGRTLDKDP- 98 + + + K + +++ L L Q G T +D Sbjct: 583 ENAGKMVLLDKLLPKLKERDSRVLIFSQMTRLLDILEDYLMYKGYQYCRIDGNTGGEDRD 642 Query: 99 CTIQEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 +I+ +N+ + + + G G+NL ++++ + W+ + Q R Sbjct: 643 ASIEAFNKPGSEKFVFLLSTRAGGLGINL-ATADVVILYDSDWNPQVDLQA-----QDRA 696 Query: 157 RQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + G K+ V V+ + TI+E V++R K + L++ Sbjct: 697 HRIGQKKEVQVFRFCTEYTIEEKVIERAYKKLALDALVIQ 736 >gi|302802510|ref|XP_002983009.1| hypothetical protein SELMODRAFT_117536 [Selaginella moellendorffii] gi|300149162|gb|EFJ15818.1| hypothetical protein SELMODRAFT_117536 [Selaginella moellendorffii] Length = 975 Score = 84.2 bits (207), Expect = 1e-14, Method: Composition-based stats. Identities = 39/220 (17%), Positives = 80/220 (36%), Gaps = 35/220 (15%) Query: 6 KFQRELYCDLQGENIEAFNSASKTVKCLQLA-----------------NGAVYYDEEKHW 48 K Q+ Y L ++++A N+ + + L +A G Y E Sbjct: 348 KMQKHYYGSLLQKDLDAINTGGERRRLLNIAMQLKKCCNHPYLFQGAEPGPPYLSGEHLV 407 Query: 49 KEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARL---------QKAFPQGRTL-DKDP 98 + + + K + +++ L L Q G+T ++ Sbjct: 408 ENSGKMVLLDKLLPKLKQRDSRVLIFSQMTRLLDILEDYCIYRTYQYCRIDGKTSGEERE 467 Query: 99 CTIQEWNE--GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 I+ +N+ + L + G G+NL +I++ + W+ + Q R Sbjct: 468 AAIESFNKEGSEKFLFLLSTRAGGLGINL-ATADIVILYDSDWNPQADLQA-----QDRA 521 Query: 157 RQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + G K+ V V+ + TI+E V++R K + L++ Sbjct: 522 HRIGQKKEVQVFRFCTELTIEEKVIERAYKKLALDALVIQ 561 >gi|115930771|ref|XP_001182799.1| PREDICTED: similar to MGC108253 protein, partial [Strongylocentrotus purpuratus] Length = 1302 Score = 84.2 bits (207), Expect = 1e-14, Method: Composition-based stats. Identities = 28/156 (17%), Positives = 65/156 (41%), Gaps = 19/156 (12%) Query: 57 KALEVIIEKANAAPIIVAYHFNSDLARLQKAFP---------QGRT-LDKDPCTIQEWNE 106 K L + E+ + +++ F L +Q+ G+T + + I ++N+ Sbjct: 1151 KMLADLKEQ--GSRVLLFSQFVMVLDIVQEYLKIRGHKFVRMDGQTPVAERAQLIDKFNK 1208 Query: 107 GK-IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 + + + G G+NL N ++ + ++ +Q +R + G R V Sbjct: 1209 NDSVFIFMLSTRAGGVGINLT-AANTVILHDIDFNPYNDKQAEDRC-----HRVGQTREV 1262 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 V L+++ TI+E +L + K ++ + + + E Sbjct: 1263 SVIRLVSKQTIEEGMLSCAKYKLKLEKQMTSGISGE 1298 >gi|74001934|ref|XP_535658.2| PREDICTED: similar to SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1 isoform 1 [Canis familiaris] gi|74001936|ref|XP_861412.1| PREDICTED: similar to SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1 isoform 2 [Canis familiaris] Length = 1025 Score = 84.2 bits (207), Expect = 1e-14, Method: Composition-based stats. Identities = 30/157 (19%), Positives = 62/157 (39%), Gaps = 19/157 (12%) Query: 51 VHDEKIKALEVIIEKAN--AAPIIVAYHFNSDLARL---------QKAFPQGRT-LDKDP 98 + K + L I+ + +++ F L L + G+T + + Sbjct: 850 LDSGKFRVLGCILSELKQKGDRVVLFSQFTMMLDILEVLLKHHQHRYLRLDGKTQISERI 909 Query: 99 CTIQEWNEG-KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 I E+N I + + G G+NL N+++ + + +Q +R Sbjct: 910 HLIDEFNTDMDIFVFLLSTKAGGLGINLT-SANVVILHDIDCNPYNDKQAEDRC-----H 963 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 + G + V V LI+Q TI+E +L+ + K ++ + Sbjct: 964 RVGQTKEVLVIKLISQGTIEESMLKINQQKLKLEQDM 1000 >gi|330918867|ref|XP_003298372.1| hypothetical protein PTT_09092 [Pyrenophora teres f. teres 0-1] gi|311328410|gb|EFQ93512.1| hypothetical protein PTT_09092 [Pyrenophora teres f. teres 0-1] Length = 1029 Score = 84.2 bits (207), Expect = 1e-14, Method: Composition-based stats. Identities = 19/130 (14%), Positives = 44/130 (33%), Gaps = 17/130 (13%) Query: 72 IVAYHFNSDLARLQKAFPQGR----------TLDKDPCTIQEW-NEGKIPLLFAHPASCG 120 IV F S L ++ + T + +I + + + + G Sbjct: 879 IVFSQFTSMLQLIEWRLRRAGFNTVMLDGSMTPAQRQKSIDHFMTNPDVEVFLVSLKAGG 938 Query: 121 HGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELV 180 LNL + + WW+ Q +R + G +R + L +++++ + Sbjct: 939 VALNLTEASRVFI-VDPWWNPAAEWQSADRC-----HRIGQRRPCVITRLCVEDSVESRM 992 Query: 181 LQRLRTKSTI 190 + K+ + Sbjct: 993 VALQEKKAAM 1002 >gi|254568884|ref|XP_002491552.1| Protein involved in transcription-coupled repair nucleotide excision repair of UV-induced DNA lesion [Pichia pastoris GS115] gi|238031349|emb|CAY69272.1| Protein involved in transcription-coupled repair nucleotide excision repair of UV-induced DNA lesion [Pichia pastoris GS115] gi|328351939|emb|CCA38338.1| DNA excision repair protein ERCC-6 [Pichia pastoris CBS 7435] Length = 1088 Score = 84.2 bits (207), Expect = 1e-14, Method: Composition-based stats. Identities = 27/173 (15%), Positives = 58/173 (33%), Gaps = 30/173 (17%) Query: 53 DEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEW------ 104 K++ ++ ++E K+ ++ L L+ + + + Sbjct: 651 SGKMQVVKKLLELWKSQGHKTLLFTQTRQMLDILESFLERLNAKGAEEEDFVPFKFLRMD 710 Query: 105 ----------------NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMI 148 N+ + G G+NL G N ++ + W+ Q Sbjct: 711 GTTSIGVRQSLVDVFNNDPSYNVFLLTTRVGGLGVNLT-GANRVIIYDPDWNPSTDVQAR 769 Query: 149 ERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 ER + G K+ V +Y L+ +I+E + R K + + +L K+ Sbjct: 770 ERAW-----RLGQKKDVTIYRLMIAGSIEEKIYHRQIFKQFLTNKILKDPKQR 817 >gi|221043716|dbj|BAH13535.1| unnamed protein product [Homo sapiens] Length = 596 Score = 84.2 bits (207), Expect = 1e-14, Method: Composition-based stats. Identities = 30/157 (19%), Positives = 62/157 (39%), Gaps = 19/157 (12%) Query: 51 VHDEKIKALEVIIEKAN--AAPIIVAYHFNSDLARL---------QKAFPQGRT-LDKDP 98 + K + L I+ + +++ F L L + G+T + + Sbjct: 421 LDSGKFRVLGCILSELKQKGDRVVLFSQFTMMLDILEVLLKHHQHRYLRLDGKTQISERI 480 Query: 99 CTIQEWNEG-KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 I E+N I + + G G+NL N+++ + + +Q +R Sbjct: 481 HLIDEFNTDMDIFVFLLSTKAGGLGINLT-SANVVILHDIDCNPYNDKQAEDRC-----H 534 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 + G + V V LI+Q TI+E +L+ + K ++ + Sbjct: 535 RVGQTKEVLVIKLISQGTIEESMLKINQQKLKLEQDM 571 >gi|325179497|emb|CCA13894.1| conserved hypothetical protein [Albugo laibachii Nc14] Length = 1696 Score = 84.2 bits (207), Expect = 1e-14, Method: Composition-based stats. Identities = 33/175 (18%), Positives = 62/175 (35%), Gaps = 37/175 (21%) Query: 52 HDEKIKALEVIIEKANA------------------APIIVAYHFNSDLARLQKAFPQ--- 90 H K AL ++ A ++ H L ++ F + Sbjct: 1453 HSGKFTALRDLLHDACGFSSDDNDQDETEPSLSPTHRCLIFSHLQETLDYVEHMFEECFP 1512 Query: 91 ----GRTLDKDPCTI-----QEWNE-GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWD 140 R ++ + +NE I +L + G GL L G + ++F W+ Sbjct: 1513 RLTYTRLRSTLTNSVFHEKCRNFNEDPSIDILLLTTSIGGLGLTLT-GADTVIFLEHSWN 1571 Query: 141 LEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 Q ++R + G ++V V+ LI QNT++E +L K + ++ Sbjct: 1572 PFVDLQAMDR-----AHRLGQTKSVRVFRLIMQNTLEEEILNLQSFKQQVASSVI 1621 >gi|300708940|ref|XP_002996640.1| hypothetical protein NCER_100233 [Nosema ceranae BRL01] gi|239605957|gb|EEQ82969.1| hypothetical protein NCER_100233 [Nosema ceranae BRL01] Length = 1262 Score = 84.2 bits (207), Expect = 1e-14, Method: Composition-based stats. Identities = 26/170 (15%), Positives = 55/170 (32%), Gaps = 19/170 (11%) Query: 42 YDEEKHWKEVHDEKIKALEVIIEKANAA-PIIVAYHFNSDLARL----------QKAFPQ 90 DE K+ L+ ++ K +++ L L + Sbjct: 657 IDEYYKILIQSSGKLVLLDKLLNKLYGHHKVLIFSQMTKCLDLLGEYLAYKKYKFERIDG 716 Query: 91 GRTLDKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMI 148 G D I +++ + + G G+NL + ++ F W+ + Q Sbjct: 717 GVRGDHRQAAIDRFSDANSDGFVFLLCTRAGGVGINLT-AADTVIIFDSDWNPQNDLQAQ 775 Query: 149 ERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNAL 198 R + G V +Y L+ +NT + + + K + +L + Sbjct: 776 ARC-----HRIGQTNEVKIYRLVTRNTYEREMFDKAGMKLGLDRAVLQKM 820 >gi|118781463|ref|XP_311484.3| AGAP010462-PA [Anopheles gambiae str. PEST] gi|116129961|gb|EAA07201.4| AGAP010462-PA [Anopheles gambiae str. PEST] Length = 1529 Score = 84.2 bits (207), Expect = 1e-14, Method: Composition-based stats. Identities = 30/160 (18%), Positives = 61/160 (38%), Gaps = 20/160 (12%) Query: 52 HDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQ---------KAFPQGRTLDKDPCT 100 K + L+ I+ K A +++ + ++ G T ++ Sbjct: 1095 ASGKFELLDRILPKLKATGHRVLLFCQMTQCMTIIEDYLSWRGFGYLRLDGTTKSEERGD 1154 Query: 101 I-QEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 + +++N L + G GLNLQ + +V F W+ + Q R Sbjct: 1155 LLKKFNSKNSDYFLFLLSTRAGGLGLNLQT-ADTVVIFDSDWNPHQDLQA-----QDRAH 1208 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + G + V V L+ N+++E +L R K + + ++ A Sbjct: 1209 RIGQRNEVRVLRLMTVNSVEERILAAARYKLNMDEKVIQA 1248 >gi|91807128|ref|NP_075996.2| RAD26L hypothetical protein isoform 2 [Mus musculus] gi|172046593|sp|Q9JIM3|RAD26_MOUSE RecName: Full=Putative DNA repair and recombination protein RAD26-like Length = 699 Score = 84.2 bits (207), Expect = 1e-14, Method: Composition-based stats. Identities = 30/152 (19%), Positives = 60/152 (39%), Gaps = 19/152 (12%) Query: 53 DEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQK---------AFPQGRTLDKDP-CT 100 K+K L+ ++ + +++ L LQ+ G T ++ Sbjct: 505 SGKMKVLQQLLNHFRKQRDKVLLFSFSTKLLDVLQQYCMASGLDYRRLDGSTKSEERLKI 564 Query: 101 IQEWNEG-KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQA 159 ++E+N + + + G GLN G N+++ F W+ Q ++R + Sbjct: 565 VKEFNSSQDVNICLVSTMAGGLGLNF-VGANVVILFDPTWNPANDLQAVDR-----AYRI 618 Query: 160 GFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQ 191 G R V V LI+ T++E++ R K + Sbjct: 619 GQCRDVKVLRLISLGTVEEIMYLRQVYKQQLH 650 >gi|8163804|gb|AAF73858.1|AF217319_1 putative repair and recombination helicase RAD26L [Mus musculus] Length = 685 Score = 84.2 bits (207), Expect = 1e-14, Method: Composition-based stats. Identities = 30/152 (19%), Positives = 60/152 (39%), Gaps = 19/152 (12%) Query: 53 DEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQK---------AFPQGRTLDKDP-CT 100 K+K L+ ++ + +++ L LQ+ G T ++ Sbjct: 491 SGKMKVLQQLLNHFRKQRDKVLLFSFSTKLLDVLQQYCMASGLDYRRLDGSTKSEERLKI 550 Query: 101 IQEWNEG-KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQA 159 ++E+N + + + G GLN G N+++ F W+ Q ++R + Sbjct: 551 VKEFNSSQDVNICLVSTMAGGLGLNF-VGANVVILFDPTWNPANDLQAVDR-----AYRI 604 Query: 160 GFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQ 191 G R V V LI+ T++E++ R K + Sbjct: 605 GQCRDVKVLRLISLGTVEEIMYLRQVYKQQLH 636 >gi|313231397|emb|CBY08512.1| unnamed protein product [Oikopleura dioica] Length = 1201 Score = 84.2 bits (207), Expect = 1e-14, Method: Composition-based stats. Identities = 32/148 (21%), Positives = 59/148 (39%), Gaps = 14/148 (9%) Query: 53 DEKIKALEVIIEKANAAPIIVAYHFNS-DLARLQKAFPQGRTLDKDPCTIQEWNEG---K 108 +E + ++++ +P + D R+ A G K I +N+ + Sbjct: 749 EEFLDQCTALVDQGLPSPAGSGKWIKNEDYFRMDGATSGG----KRHEFIGAFNDPLNMR 804 Query: 109 IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVY 168 L + G+NL +V F W+ Q I R+ + G + VF+Y Sbjct: 805 SRLFIISTKAGCLGVNL-VAATRVVIFDASWNPTHDIQSIFRV-----YRIGQTKPVFIY 858 Query: 169 YLIAQNTIDELVLQRLRTKSTIQDLLLN 196 L+AQ T++E V +R K + +L+ Sbjct: 859 RLVAQGTMEEKVYRRQVQKQGLAQRVLD 886 >gi|4056413|gb|AAC97987.1| SN24_HUMAN [Homo sapiens] Length = 661 Score = 84.2 bits (207), Expect = 1e-14, Method: Composition-based stats. Identities = 30/160 (18%), Positives = 62/160 (38%), Gaps = 20/160 (12%) Query: 52 HDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAF---------PQGRTLDKDPCT 100 K + L+ I+ +A +++ S + ++ F G T +D Sbjct: 265 ASGKFELLDRILPKLRATNHKVLLFCQMTSLMTIMEDYFAYRGFKYLRLDGTTKAEDRGM 324 Query: 101 I-QEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 + + +NE + + + G GLNLQ + ++ F W+ + Q R Sbjct: 325 LLKTFNEPGSEYFIFLLSTRAGGLGLNLQ-SADTVIIFDSDWNPHQDLQA-----QDRAH 378 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + G + V V L N+++E +L + K + ++ A Sbjct: 379 RIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQA 418 >gi|313844117|ref|YP_004061780.1| hypothetical protein OlV1_147c [Ostreococcus lucimarinus virus OlV1] gi|312599502|gb|ADQ91524.1| hypothetical protein OlV1_147c [Ostreococcus lucimarinus virus OlV1] Length = 480 Score = 84.2 bits (207), Expect = 1e-14, Method: Composition-based stats. Identities = 31/162 (19%), Positives = 58/162 (35%), Gaps = 19/162 (11%) Query: 53 DEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAF--PQGRTLDKDPCTIQEWN----- 105 K++ L +I+ +V F ++ +Q+ P R P ++ Sbjct: 302 SNKMETLFRMIKAHPDEKTLVFCQFRGEMDYIQQNMECPTFRIDGSVPKDERDNQVIAFK 361 Query: 106 -EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA 164 + S G GLNLQ + + W+ Q + R + G + Sbjct: 362 KAPPGAVFIIQIKSGGQGLNLQEATRVYI-TGPSWNPATELQAVGR-----SHRTGQTKQ 415 Query: 165 VFVYYLIAQNT-----IDELVLQRLRTKSTIQDLLLNALKKE 201 V+V LI + T ++E ++ KS + +LN + E Sbjct: 416 VYVKKLIYKETDTFVSVEEEMMALQGHKSIVCSKVLNDERIE 457 >gi|194743128|ref|XP_001954052.1| GF18082 [Drosophila ananassae] gi|190627089|gb|EDV42613.1| GF18082 [Drosophila ananassae] Length = 1314 Score = 84.2 bits (207), Expect = 1e-14, Method: Composition-based stats. Identities = 35/206 (16%), Positives = 75/206 (36%), Gaps = 35/206 (16%) Query: 9 RELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIE---- 64 + + + N+ ++ LQ A+ V + +++L +IE Sbjct: 881 KPFVEERELNNVHHSPKLVILLRLLQ-QCEAI-----GDKLLVFSQSLQSL-DVIEHFLS 933 Query: 65 --KANAAPIIVAYHFNSDLARLQKAFPQGRTL---------DKDPCTIQEWNEG---KIP 110 +N Y F D+ + + G+ ++ +++N + Sbjct: 934 LVDSNTKN----YEFEGDVGDFKGCWTIGKDYFRLDGSCSVEQREAMCKQFNNLTNLRAR 989 Query: 111 LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYL 170 L + G G+NL N +V F + W+ Q I R+ + G + ++Y L Sbjct: 990 LFLISTRAGGLGINLT-AANRVVIFDVSWNPSHDTQSIFRV-----YRFGQIKPCYIYRL 1043 Query: 171 IAQNTIDELVLQRLRTKSTIQDLLLN 196 IA T+++ V +R K +++ Sbjct: 1044 IAMGTMEQKVYERQVAKQATAKRVID 1069 >gi|302764218|ref|XP_002965530.1| hypothetical protein SELMODRAFT_84809 [Selaginella moellendorffii] gi|300166344|gb|EFJ32950.1| hypothetical protein SELMODRAFT_84809 [Selaginella moellendorffii] Length = 971 Score = 84.2 bits (207), Expect = 1e-14, Method: Composition-based stats. Identities = 39/220 (17%), Positives = 80/220 (36%), Gaps = 35/220 (15%) Query: 6 KFQRELYCDLQGENIEAFNSASKTVKCLQLA-----------------NGAVYYDEEKHW 48 K Q+ Y L ++++A N+ + + L +A G Y E Sbjct: 348 KMQKHYYGSLLQKDLDAINTGGERRRLLNIAMQLKKCCNHPYLFQGAEPGPPYLSGEHLV 407 Query: 49 KEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARL---------QKAFPQGRTL-DKDP 98 + + + K + +++ L L Q G+T ++ Sbjct: 408 ENSGKMVLLDKLLPKLKQRDSRVLIFSQMTRLLDILEDYCIYRTYQYCRIDGKTSGEERE 467 Query: 99 CTIQEWNE--GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 I+ +N+ + L + G G+NL +I++ + W+ + Q R Sbjct: 468 AAIESFNKEGSEKFLFLLSTRAGGLGINL-ATADIVILYDSDWNPQADLQA-----QDRA 521 Query: 157 RQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + G K+ V V+ + TI+E V++R K + L++ Sbjct: 522 HRIGQKKEVQVFRFCTELTIEEKVIERAYKKLALDALVIQ 561 >gi|281348912|gb|EFB24496.1| hypothetical protein PANDA_003305 [Ailuropoda melanoleuca] Length = 1009 Score = 84.2 bits (207), Expect = 1e-14, Method: Composition-based stats. Identities = 30/157 (19%), Positives = 62/157 (39%), Gaps = 19/157 (12%) Query: 51 VHDEKIKALEVIIEKAN--AAPIIVAYHFNSDLARL---------QKAFPQGRT-LDKDP 98 + K + L I+ + +++ F L L + G+T + + Sbjct: 853 LDSGKFRVLGCILSELKQKGDRVVLFSQFTMMLDILEVLLKHHQHRYLRLDGKTQISERI 912 Query: 99 CTIQEWNEG-KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 I E+N I + + G G+NL N+++ + + +Q +R Sbjct: 913 HLIDEFNTDMDIFVFLLSTKAGGLGINLT-SANVVILHDIDCNPYNDKQAEDRC-----H 966 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 + G + V V LI+Q TI+E +L+ + K ++ + Sbjct: 967 RVGQTKEVLVIKLISQGTIEESMLKINQQKLKLEQDM 1003 >gi|300796173|ref|NP_001179215.1| helicase-like transcription factor [Bos taurus] gi|297471227|ref|XP_002685073.1| PREDICTED: helicase-like transcription factor [Bos taurus] gi|296491102|gb|DAA33185.1| helicase-like transcription factor [Bos taurus] Length = 1009 Score = 84.2 bits (207), Expect = 1e-14, Method: Composition-based stats. Identities = 29/170 (17%), Positives = 61/170 (35%), Gaps = 23/170 (13%) Query: 39 AVYYDEEKHWKEVHDEKIKALE----VIIEKANAAPIIVAYHFNSDLARLQK-------- 86 A +++ + + KI AL + +K +V F + L+ ++ Sbjct: 818 ACNTEKKSNMEWTSSSKINALMHALIDLRKKNPNIKSLVVSQFTTFLSLIETPLRASGFV 877 Query: 87 --AFPQGRTLDKDPCTIQEWNE---GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDL 141 K +IQ + G ++ + G GLNL + + W+ Sbjct: 878 FTRLDGSMAQKKRVESIQCFQNTEAGSPTIMLLSLKAGGVGLNL-SAASRVFLMDPAWNP 936 Query: 142 EEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQ 191 Q +R + G K+ V + I +++++E +L+ TK + Sbjct: 937 AAEDQCFDRC-----HRLGQKQEVIITKFIVKDSVEENMLKIQNTKRELA 981 >gi|301106883|ref|XP_002902524.1| conserved hypothetical protein [Phytophthora infestans T30-4] gi|262098398|gb|EEY56450.1| conserved hypothetical protein [Phytophthora infestans T30-4] Length = 1449 Score = 84.2 bits (207), Expect = 1e-14, Method: Composition-based stats. Identities = 29/138 (21%), Positives = 55/138 (39%), Gaps = 19/138 (13%) Query: 72 IVAYHFNSDLARLQKAFPQG------RTLD------KDPCTIQEWN-EGKIPLLFAHPAS 118 +V H L ++ R LD K +Q++N + I +L + Sbjct: 1238 LVFAHLQKTLDLTEQMLENALPGVTYRRLDGRTPHTKRADIVQQFNADPSIDVLLLTTSV 1297 Query: 119 CGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDE 178 G GL L G + ++F W+ Q ++R + G KR V V+ LI + +++E Sbjct: 1298 GGLGLTLT-GADTVIFLEHSWNPFVDLQAMDR-----AHRIGQKRTVRVFRLIMERSLEE 1351 Query: 179 LVLQRLRTKSTIQDLLLN 196 ++ K + ++ Sbjct: 1352 HIVNLQEFKEQVAATVVQ 1369 >gi|8977885|emb|CAB95769.1| hypothetical protein [Homo sapiens] Length = 594 Score = 84.2 bits (207), Expect = 1e-14, Method: Composition-based stats. Identities = 30/157 (19%), Positives = 62/157 (39%), Gaps = 19/157 (12%) Query: 51 VHDEKIKALEVIIEKAN--AAPIIVAYHFNSDLARL---------QKAFPQGRT-LDKDP 98 + K + L I+ + +++ F L L + G+T + + Sbjct: 419 LDSGKFRVLGCILSELKQKGDRVVLFSQFTMMLDILEVLLKHHQHRYLRLDGKTQISERI 478 Query: 99 CTIQEWNEG-KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 I E+N I + + G G+NL N+++ + + +Q +R Sbjct: 479 HLIDEFNTDMDIFVFLLSTKAGGLGINLT-SANVVILHDIDCNPYNDKQAEDRC-----H 532 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 + G + V V LI+Q TI+E +L+ + K ++ + Sbjct: 533 RVGQTKEVLVIKLISQGTIEESMLKINQQKLKLEQDM 569 >gi|298376514|ref|ZP_06986469.1| zinc finger Ran-binding domain-containing protein 3 [Bacteroides sp. 3_1_19] gi|298266392|gb|EFI08050.1| zinc finger Ran-binding domain-containing protein 3 [Bacteroides sp. 3_1_19] Length = 563 Score = 84.2 bits (207), Expect = 1e-14, Method: Composition-based stats. Identities = 40/205 (19%), Positives = 80/205 (39%), Gaps = 21/205 (10%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEV 61 K+Y +R+L L+ K++K + + D K++ + Sbjct: 348 KEYQDAERDLVDYLRRYKEADDEKVQKSLKGEVMVRIGILKD------ITARGKLREVID 401 Query: 62 IIE--KANAAPIIVAYHFNSDLARLQKAFPQG------RTLDKDPCTIQEWN-EGKIPLL 112 ++ + N II+ + + + RL +AFP + + + I + K ++ Sbjct: 402 FVKDFRENGKKIILFCNLHEIVDRLLQAFPSAVCVTGRQDMQQKQAAIDAFQRNPKTDVI 461 Query: 113 FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIA 172 + G+ L N + F L W + Q +R + G K +V YYL+ Sbjct: 462 ICSIKAAAAGITLTASSN-VAFIELPWTYADCDQA-----ESRAHRIGQKDSVNCYYLLG 515 Query: 173 QNTIDELVLQRLRTKSTIQDLLLNA 197 + TID+ + + + K I + +L A Sbjct: 516 RKTIDQKLYRIIEEKKHISNAVLGA 540 >gi|150866895|ref|XP_001386641.2| Nuclear protein STH1/NPS1 (Chromatin structure remodeling complex protein STH1) (SNF2 homolog) [Scheffersomyces stipitis CBS 6054] gi|149388151|gb|ABN68612.2| Nuclear protein STH1/NPS1 (Chromatin structure remodeling complex protein STH1) (SNF2 homolog) [Scheffersomyces stipitis CBS 6054] Length = 1259 Score = 84.2 bits (207), Expect = 1e-14, Method: Composition-based stats. Identities = 32/162 (19%), Positives = 64/162 (39%), Gaps = 20/162 (12%) Query: 52 HDEKIKALEVIIEK--ANAAPIIVAYH------FNSDLAR---LQKAFPQGRTLDKDPC- 99 K + L+ ++ K A+ +++ + D R ++ G T +D Sbjct: 797 TSGKFELLDRVLPKFKASGHRVLMFFQMTQVMDIMEDFLRWRDMKYLRLDGSTKAEDRQE 856 Query: 100 TIQEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 ++ +N + G GLNLQ + ++ F W+ + Q R Sbjct: 857 MLKVFNAPNSDYFCFLLSTRAGGLGLNLQT-ADTVIIFDTDWNPHQDLQA-----QDRAH 910 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 + G K V + LI ++++E++L+R K I ++ A K Sbjct: 911 RIGQKNEVRILRLITNDSVEEVILERAHQKLDIDGKVIQAGK 952 >gi|47226612|emb|CAG07771.1| unnamed protein product [Tetraodon nigroviridis] Length = 1037 Score = 84.2 bits (207), Expect = 1e-14, Method: Composition-based stats. Identities = 32/167 (19%), Positives = 64/167 (38%), Gaps = 20/167 (11%) Query: 45 EKHWKEVHDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAF---------PQGRT 93 H K + L+ I+ +A +++ S + ++ F G T Sbjct: 520 SGHDLYRASGKFELLDRILPKLQATNHRVLLFCQMTSLMTIMEDYFSYRNFLYLRLDGTT 579 Query: 94 LDKDPCTI-QEWNE--GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 +D + +++NE + + + G GLNLQ + +V F W+ + Q Sbjct: 580 KSEDRAALLKKFNEEGSQYFIFLLSTRAGGLGLNLQ-AADTVVIFDSDWNPHQDLQA--- 635 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 R + G + V V L N+++E +L + K + ++ A Sbjct: 636 --QDRAHRIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQA 680 >gi|195353657|ref|XP_002043320.1| GM26909 [Drosophila sechellia] gi|194127434|gb|EDW49477.1| GM26909 [Drosophila sechellia] Length = 264 Score = 84.2 bits (207), Expect = 1e-14, Method: Composition-based stats. Identities = 24/75 (32%), Positives = 41/75 (54%), Gaps = 7/75 (9%) Query: 132 LVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQ 191 ++F+ W+ QQ ++R + G + V VY LI + TI+E +LQR R KS IQ Sbjct: 15 VIFYDSDWNPTVDQQAMDR-----AHRLGQTKQVTVYRLICKGTIEERILQRAREKSEIQ 69 Query: 192 DLLLNA--LKKETIH 204 ++++ K +T+ Sbjct: 70 RMVISGGNFKPDTLK 84 >gi|194100669|ref|YP_002003418.1| gp60 [Mycobacterium phage Predator] gi|192758385|gb|ACF05157.1| gp60 [Mycobacterium phage Predator] Length = 670 Score = 84.2 bits (207), Expect = 1e-14, Method: Composition-based stats. Identities = 37/216 (17%), Positives = 77/216 (35%), Gaps = 28/216 (12%) Query: 2 KQYHKFQRELYCDLQG-ENIEAFNSASKTVKCLQLANGAVYYD------EEKHWKEVHDE 54 KQY + +RE ++ G + I ++ +C Q+AN + D K Sbjct: 433 KQYREIEREALINIGGEDEITVNGVLAEMTRCKQIANSCLKTDGFKSDGNPKVVPVFPSN 492 Query: 55 KIKALEV-IIEK-ANAAPIIVAYHFNSDLARLQKAFPQGRTLD----------KDPCTIQ 102 K + + ++++ N IVA F L L + + + Sbjct: 493 KAEWIHDFLVDRIENGTKTIVASQFTGFLNTLSAELEKKGIKHYLYTGATNEPERKRIRK 552 Query: 103 EWNE--GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 E+ G + ++ + S G L L ++++ W ++ +Q+ +R + Sbjct: 553 EFQSESGDM-VVLLNTKSGGVSLTLDLADDVVI-VDQTWIPDDQEQVEDR-----AHRVS 605 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 V ++ L + TIDE + + +L Sbjct: 606 RNHNVVIWNLASLGTIDEDIAVLNTERGEAISSILE 641 >gi|145614554|ref|XP_362144.2| hypothetical protein MGG_04589 [Magnaporthe oryzae 70-15] gi|145021462|gb|EDK05591.1| hypothetical protein MGG_04589 [Magnaporthe oryzae 70-15] Length = 1654 Score = 84.2 bits (207), Expect = 1e-14, Method: Composition-based stats. Identities = 33/160 (20%), Positives = 62/160 (38%), Gaps = 20/160 (12%) Query: 52 HDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARL----QKAFPQGRTLDKD------PC 99 K+ L+ ++ K + +++ L L + Q + LD Sbjct: 779 SSGKMMLLDQLLAKLKKDNHRVLIFSQMVKMLDILGDYLRVRGYQYQRLDGTIPAGPRRM 838 Query: 100 TIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 I +N + G G+NL + ++ + W+ + Q + R Sbjct: 839 AINHFNAPDSEDFCFLLSTRAGGLGINLMT-ADTVIIYDSDWNPQADLQAMAR-----AH 892 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + G KR V VY L+A+ T++E V+ R R K ++ L + A Sbjct: 893 RIGQKRPVNVYRLVAKQTVEEEVVNRARNKLFLEYLTIQA 932 >gi|308806421|ref|XP_003080522.1| chromatin-remodelling complex ATPase ISWI2 (ISS) [Ostreococcus tauri] gi|116058982|emb|CAL54689.1| chromatin-remodelling complex ATPase ISWI2 (ISS) [Ostreococcus tauri] Length = 1036 Score = 84.2 bits (207), Expect = 1e-14, Method: Composition-based stats. Identities = 30/222 (13%), Positives = 77/222 (34%), Gaps = 39/222 (17%) Query: 6 KFQRELYCDLQGENIEAFNSASKTVKCLQLA-----------------NGAVYYDEEKHW 48 + Q+ Y + ++I+ NS + + L + G Y + Sbjct: 414 EMQKTFYKRILQKDIDIVNSGADRSRLLNIVMQLRKCCNHPYLFQGAEPGPPYITGDHLI 473 Query: 49 KEVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQKAFPQGRTL----------DK 96 + K+ L+ ++ + + +++ L L+ R + Sbjct: 474 E--SSGKLALLDKLLPRLMERGSRVLIFSQMTRLLDILEDYMMYRRYQYCRIDGSTDGET 531 Query: 97 DPCTIQEWNE--GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 I +N+ + + G G+NL + ++ + W+ + Q ++R Sbjct: 532 RENHIDAFNKEGSEKFAFLLSTRAGGLGINL-ATADTVIIYDSDWNPQMDLQAMDR---- 586 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + G K+ V V+ +++E V+++ K + L++ Sbjct: 587 -AHRIGQKKEVQVFRFCTDGSVEEKVIEKAYKKLALDALVIQ 627 >gi|73986628|ref|XP_867815.1| PREDICTED: similar to SWI/SNF-related matrix-associated actin-dependent regulator of chromatin a4 isoform 18 [Canis familiaris] Length = 1593 Score = 84.2 bits (207), Expect = 1e-14, Method: Composition-based stats. Identities = 30/160 (18%), Positives = 62/160 (38%), Gaps = 20/160 (12%) Query: 52 HDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAF---------PQGRTLDKDPCT 100 K + L+ I+ +A +++ S + ++ F G T +D Sbjct: 1057 ASGKFELLDRILPKLRATNHKVLLFCQMTSLMTIMEDYFAYRGFKYLRLDGTTKAEDRGM 1116 Query: 101 I-QEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 + + +NE + + + G GLNLQ + ++ F W+ + Q R Sbjct: 1117 LLKTFNEPGSEYFIFLLSTRAGGLGLNLQ-SADTVIIFDSDWNPHQDLQA-----QDRAH 1170 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + G + V V L N+++E +L + K + ++ A Sbjct: 1171 RIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQA 1210 >gi|322792800|gb|EFZ16633.1| hypothetical protein SINV_04571 [Solenopsis invicta] Length = 3043 Score = 84.2 bits (207), Expect = 1e-14, Method: Composition-based stats. Identities = 25/102 (24%), Positives = 43/102 (42%), Gaps = 7/102 (6%) Query: 96 KDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 + I E+N KI L + G+NL G N + F W+ Q + Sbjct: 2077 EREKLINEFNSNPKIHLFLVSTRAGSLGINL-VGANRAIVFDASWNPCHDTQAV-----C 2130 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 R + G K+ FVY L+ N ++ + R +K + D +++ Sbjct: 2131 RVYRYGQKKPCFVYRLVTDNCLERKIYDRQISKQGMADRVVD 2172 >gi|330917877|ref|XP_003297996.1| hypothetical protein PTT_08573 [Pyrenophora teres f. teres 0-1] gi|311329044|gb|EFQ93908.1| hypothetical protein PTT_08573 [Pyrenophora teres f. teres 0-1] Length = 1069 Score = 84.2 bits (207), Expect = 1e-14, Method: Composition-based stats. Identities = 29/153 (18%), Positives = 55/153 (35%), Gaps = 21/153 (13%) Query: 55 KIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAFPQGRTL------------DKDPCT 100 K K L +++ +N +++ H L L+ F T + Sbjct: 646 KWKVLRRLLDFWHSNGDKVLIFSHSVRLLRLLRGLFDVDGTKYNFSYLDGSMKYEDRSQA 705 Query: 101 IQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQA 159 + ++N + + + G GLN+ ++V W+ Q R + Sbjct: 706 VADFNADPNQFVFLISTKAGGVGLNITSANKVVVM-DPHWNPAYDLQA-----QDRAYRI 759 Query: 160 GFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQD 192 G R V V+ L++ TI+E+V R K + Sbjct: 760 GQTRNVEVFRLVSSGTIEEVVYARQIYKQQQAN 792 >gi|312086132|ref|XP_003144957.1| helicase DNA-binding protein [Loa loa] gi|307759879|gb|EFO19113.1| helicase DNA-binding protein [Loa loa] Length = 1412 Score = 84.2 bits (207), Expect = 1e-14, Method: Composition-based stats. Identities = 29/199 (14%), Positives = 69/199 (34%), Gaps = 27/199 (13%) Query: 8 QRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYD-------EEKHWKEVHDEKIKALE 60 + ++ +++ + + +Q + V + H + + ++ L Sbjct: 55 EEQILAEVKTGHPDWSEDDVYQYALVQSSGKLVLIAKLLPKLHTDGHKVLIFSQMVRVL- 113 Query: 61 VIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIP--LLFAHPAS 118 IIE+ ++A ++ R+ D I +++ + + Sbjct: 114 DIIEE-----FLIAQNYT--FERIDGNVRG----DLRQSAIDRFSKKDSDRFIFLLCTRA 162 Query: 119 CGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDE 178 G G+NL + ++ F W+ + Q R + G + V VY LI NT + Sbjct: 163 GGLGINLT-AADTVIIFDSDWNPQNDLQAQARC-----HRIGQTKMVKVYRLITCNTYER 216 Query: 179 LVLQRLRTKSTIQDLLLNA 197 + + K + +L + Sbjct: 217 EMFDKASLKLGLDRAVLQS 235 >gi|74150111|dbj|BAE24366.1| unnamed protein product [Mus musculus] Length = 924 Score = 84.2 bits (207), Expect = 1e-14, Method: Composition-based stats. Identities = 23/128 (17%), Positives = 46/128 (35%), Gaps = 18/128 (14%) Query: 68 AAPIIVAYHFNSDLARLQKAFP---------QGRTLDK-DPCTIQEWN-EGKIPL-LFAH 115 +++ L L + G + + +N EG Sbjct: 802 GNRVLIFSQMVRMLDILAEYLKYRQFPFQRLDGSIKGELRKQALDHFNAEGSEDFCFLLS 861 Query: 116 PASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNT 175 + G G+NL + +V F W+ + Q R + G K+ V +Y L+ + + Sbjct: 862 TRAGGLGINL-ASADTVVIFDSDWNPQNDLQAQAR-----AHRIGQKKQVNIYRLVTKGS 915 Query: 176 IDELVLQR 183 ++E +L+R Sbjct: 916 VEEDILER 923 >gi|68076769|ref|XP_680304.1| DNA helicase [Plasmodium berghei strain ANKA] gi|56501218|emb|CAH93993.1| DNA helicase, putative [Plasmodium berghei] Length = 1396 Score = 83.8 bits (206), Expect = 1e-14, Method: Composition-based stats. Identities = 37/188 (19%), Positives = 70/188 (37%), Gaps = 41/188 (21%) Query: 46 KHWKEVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQKA----------FPQGRT 93 K V+ K++ L I++ N ++V + L ++K + T Sbjct: 1188 KKDNFVYSTKLRILFDHIKEDIKNELHVVVFSQWIGFLKIIEKLLTLHEIPNKIYDGSLT 1247 Query: 94 LDKDPCTIQEWN--EGKI---------------------PLLFAHPASCGHGLNLQYGGN 130 ++ T+ +N +GKI +L + G GLNL + Sbjct: 1248 YEQRKSTLYWFNIQKGKIYQPGIGFCQSTCDIPIENESGKVLLCSLKAGGVGLNLTVS-S 1306 Query: 131 ILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 + LWW+ Q ERI + G + V +Y + + T++E +LQ ++K Sbjct: 1307 KVYLMDLWWNPAIEDQAFERI-----HRIGQLKDVNIYKFVLEKTVEERILQIHQSKQYT 1361 Query: 191 QDLLLNAL 198 + L + Sbjct: 1362 ANQCLAQV 1369 >gi|67624283|ref|XP_668424.1| SWI/SNF-related, matrix associated, actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1 [Cryptosporidium hominis TU502] gi|54659629|gb|EAL38197.1| SWI/SNF-related, matrix associated, actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1 [Cryptosporidium hominis] Length = 807 Score = 83.8 bits (206), Expect = 1e-14, Method: Composition-based stats. Identities = 35/170 (20%), Positives = 74/170 (43%), Gaps = 17/170 (10%) Query: 24 NSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLAR 83 N + K K ++ V ++EK H L IIE+ I + Y+ + R Sbjct: 646 NGSCKLRKMNEIIQSTVIENKEKCLIFCHHT---MLLDIIEEY----IKIKYNMSDFYLR 698 Query: 84 LQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEE 143 L P + + I+++ ++PL + G GLNL + ++ L ++ + Sbjct: 699 LDGTTP----ILERQNMIEKFQTTQVPLFLLSTKAAGQGLNLTVASS-VIMMDLDYNPQI 753 Query: 144 HQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDL 193 +Q +R+ + G + V ++ L+ ++TI+E + ++K T+ + Sbjct: 754 EKQAEDRV-----HRIGQSKQVKIFKLVCKDTIEENIFNCCQSKLTLDNA 798 >gi|195452364|ref|XP_002073321.1| GK14069 [Drosophila willistoni] gi|194169406|gb|EDW84307.1| GK14069 [Drosophila willistoni] Length = 808 Score = 83.8 bits (206), Expect = 1e-14, Method: Composition-based stats. Identities = 31/154 (20%), Positives = 64/154 (41%), Gaps = 19/154 (12%) Query: 58 ALEVIIEKANAAPIIVAYHFNSDLARLQKAFP---------QGRTLDKDPCTI-QEWNEG 107 L+ ++ + N +IV + S L ++K G+ KD + E+N+ Sbjct: 644 KLQQVLNETNDK-VIVVSQWTSFLDVIKKHLDSLSWETLAFNGKMSFKDRQLVLDEFNDT 702 Query: 108 KIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 +L + G GLNL N L+ L W+ + +Q +RI + G + Sbjct: 703 NNSKRVLLLSLTAGGVGLNLNV-ANHLLLIDLHWNPQLEKQAQDRI-----YRYGQHKKT 756 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 ++Y + +TI++ + K + +++N + Sbjct: 757 YIYRFMCVDTIEQRIQALQDYKLELAKMVINGGR 790 >gi|149701562|ref|XP_001497332.1| PREDICTED: similar to SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1 isoform 3 [Equus caballus] Length = 892 Score = 83.8 bits (206), Expect = 1e-14, Method: Composition-based stats. Identities = 30/157 (19%), Positives = 62/157 (39%), Gaps = 19/157 (12%) Query: 51 VHDEKIKALEVIIEKAN--AAPIIVAYHFNSDLARL---------QKAFPQGRT-LDKDP 98 + K + L I+ + +++ F L L + G+T + + Sbjct: 717 LDSGKFRVLGRILSELKQKGDRVVLFSQFTMMLDILEVLLKHHQHRYLRLDGKTQISERI 776 Query: 99 CTIQEWNEG-KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 I E+N I + + G G+NL N+++ + + +Q +R Sbjct: 777 HLIDEFNTDMDIFVFLLSTKAGGLGINLT-SANVVILHDIDCNPYNDKQAEDRC-----H 830 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 + G + V V LI+Q TI+E +L+ + K ++ + Sbjct: 831 RVGQTKEVLVIKLISQGTIEESMLKINQQKLKLEQDM 867 >gi|317150332|ref|XP_001823954.2| DNA excision repair protein (Rad26L) [Aspergillus oryzae RIB40] Length = 970 Score = 83.8 bits (206), Expect = 1e-14, Method: Composition-based stats. Identities = 30/138 (21%), Positives = 50/138 (36%), Gaps = 17/138 (12%) Query: 66 ANAAPIIVAYHFNSDLARLQKAF----------PQGRTLDKDPCTIQEWN-EGKIPLLFA 114 +N ++V H L LQ F + + + E+N + + + Sbjct: 670 SNGDKVLVFSHSVRLLRMLQMLFHHTSYNVSYLDGSMSYEDRATAVDEFNSDPRQFVFLI 729 Query: 115 HPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQN 174 + G GLN+ N +V W+ Q R + G R V V+ LI+ Sbjct: 730 STRAGGVGLNIT-SANKVVVVDPNWNPSYDLQA-----QDRAYRIGQVRDVEVFRLISAG 783 Query: 175 TIDELVLQRLRTKSTIQD 192 TI+E+V R K + Sbjct: 784 TIEEIVYARQIYKQQQAN 801 >gi|313217104|emb|CBY38281.1| unnamed protein product [Oikopleura dioica] Length = 1430 Score = 83.8 bits (206), Expect = 1e-14, Method: Composition-based stats. Identities = 25/146 (17%), Positives = 49/146 (33%), Gaps = 18/146 (12%) Query: 65 KANAAPIIVAYHFNSDLARLQKAF---------PQGRTLDKDPCT-IQEWNEGKIP--LL 112 KA +++ L L+ GR D I + + + Sbjct: 765 KAGGHKVLIFSQMIRVLDILEDYLYQMSMGFERLDGRIRGNDRQAAIDRFCKPDSDRFVF 824 Query: 113 FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIA 172 + G G+NL + ++ F W+ + Q R + G K+ V +Y L+ Sbjct: 825 LLCTRAGGLGINLT-AADTVIIFDSDWNPQNDLQAQARC-----HRIGQKKEVKIYRLLT 878 Query: 173 QNTIDELVLQRLRTKSTIQDLLLNAL 198 T + + R K + +L ++ Sbjct: 879 SKTYEREMFDRASLKLGLDRAVLQSM 904 >gi|315048349|ref|XP_003173549.1| DNA repair protein RAD5 [Arthroderma gypseum CBS 118893] gi|311341516|gb|EFR00719.1| DNA repair protein RAD5 [Arthroderma gypseum CBS 118893] Length = 922 Score = 83.8 bits (206), Expect = 1e-14, Method: Composition-based stats. Identities = 31/153 (20%), Positives = 60/153 (39%), Gaps = 20/153 (13%) Query: 52 HDEKIKALEVIIEK---ANAAPIIVAYHFNSDLARLQ-----KAFPQGRT------LDKD 97 KI+AL I+ A +V + S L ++ R +D Sbjct: 748 SSSKIQALIKILTAKGQAAGTKTVVFSQWTSFLDLIEPQLALNNIKFARIDGKMNSSKRD 807 Query: 98 PCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 + ++ + ++ A C GLNL N ++ WW Q ++R+ Sbjct: 808 AAMSKLTHDPECSVMLASLNVCSVGLNL-VAANQVILADSWWAPAIEDQAVDRV-----Y 861 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 + G +RA ++ L+ +N+I++ VL + K + Sbjct: 862 RLGQQRATTIWRLVMENSIEDRVLDIQKEKREL 894 >gi|194389378|dbj|BAG61650.1| unnamed protein product [Homo sapiens] Length = 867 Score = 83.8 bits (206), Expect = 1e-14, Method: Composition-based stats. Identities = 30/160 (18%), Positives = 62/160 (38%), Gaps = 20/160 (12%) Query: 52 HDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAF---------PQGRTLDKDPCT 100 K + L+ I+ +A +++ S + ++ F G T +D Sbjct: 298 ASGKFELLDRILPKLRATNHKVLLFCQMTSLMTIMEDYFAYRGFKYLRLDGTTKAEDRGM 357 Query: 101 I-QEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 + + +NE + + + G GLNLQ + ++ F W+ + Q R Sbjct: 358 LLKTFNEPGSEYFIFLLSTRAGGLGLNLQ-SADTVIIFDSDWNPHQDLQA-----QDRAH 411 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + G + V V L N+++E +L + K + ++ A Sbjct: 412 RIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQA 451 >gi|195569689|ref|XP_002102841.1| GD20115 [Drosophila simulans] gi|194198768|gb|EDX12344.1| GD20115 [Drosophila simulans] Length = 264 Score = 83.8 bits (206), Expect = 1e-14, Method: Composition-based stats. Identities = 24/75 (32%), Positives = 41/75 (54%), Gaps = 7/75 (9%) Query: 132 LVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQ 191 ++F+ W+ QQ ++R + G + V VY LI + TI+E +LQR R KS IQ Sbjct: 15 VIFYDSDWNPTVDQQAMDR-----AHRLGQTKQVTVYRLICKGTIEERILQRAREKSEIQ 69 Query: 192 DLLLNA--LKKETIH 204 ++++ K +T+ Sbjct: 70 RMVISGGNFKPDTLK 84 >gi|21432058|gb|AAH32964.1| 0610007P08Rik protein [Mus musculus] Length = 394 Score = 83.8 bits (206), Expect = 1e-14, Method: Composition-based stats. Identities = 30/152 (19%), Positives = 60/152 (39%), Gaps = 19/152 (12%) Query: 53 DEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQK---------AFPQGRTLDKDP-CT 100 K+K L+ ++ + +++ L LQ+ G T ++ Sbjct: 200 SGKMKVLQQLLNHFRKQRDKVLLFSFSTKLLDVLQQYCMASGLDYRRLDGSTKSEERLKI 259 Query: 101 IQEWNEG-KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQA 159 ++E+N + + + G GLN G N+++ F W+ Q ++R + Sbjct: 260 VKEFNSSQDVNICLVSTMAGGLGLNF-VGANVVILFDPTWNPANDLQAVDR-----AYRI 313 Query: 160 GFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQ 191 G R V V LI+ T++E++ R K + Sbjct: 314 GQCRDVKVLRLISLGTVEEIMYLRQVYKQQLH 345 >gi|322697346|gb|EFY89127.1| SWI/SNF family DNA-dependent ATPase Ris1, putative [Metarhizium acridum CQMa 102] Length = 1142 Score = 83.8 bits (206), Expect = 1e-14, Method: Composition-based stats. Identities = 28/162 (17%), Positives = 61/162 (37%), Gaps = 21/162 (12%) Query: 56 IKALEVIIEKANAAPIIVAYHFNSDLARLQ-----KAFPQGRTL-------DKDPCTIQE 103 +K L I E I+ + L L+ + FP+ D+ + Sbjct: 975 MKLLREIRE--TGEKTIIFSQWTLLLDLLEVAMWHEQFPEKPIRYDGSMSGDERSTAAKH 1032 Query: 104 WNE-GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFK 162 + + + ++ + GLNL + ++ +W+ Q I+R + G + Sbjct: 1033 FRDRPEYNVMLVSLRAGNAGLNLT-AASRVIIMDPFWNPYIEMQAIDR-----TYRIGQQ 1086 Query: 163 RAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIH 204 + V VY ++ Q T+++ ++ K I + L+ + I Sbjct: 1087 KEVEVYRILTQETVEDRIVALQNKKKEIVEAALDETESMKIG 1128 >gi|289622673|emb|CBI50942.1| unnamed protein product [Sordaria macrospora] Length = 1217 Score = 83.8 bits (206), Expect = 1e-14, Method: Composition-based stats. Identities = 32/175 (18%), Positives = 57/175 (32%), Gaps = 20/175 (11%) Query: 37 NGAVYYDEEKHWKEVHDEKIKALEVIIE-KANAAPIIVAYHFNSDLAR----LQKAFPQG 91 + A Y + KI L I+ +A IV F S L L+ P Sbjct: 965 SEAEYGVKRTKAPVTISSKIHELIAILRREAPTHKFIVFSQFTSMLDLVEPFLRHHLPDI 1024 Query: 92 RTLDKDPCTIQEWNE---------GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLE 142 + + D + E + +L GLNL ++ +W+ Sbjct: 1025 KHVRYDGKMPNDAREASLHSLRKDPRTRVLLCSLKCGSLGLNLT-AATRVIIVEPFWNPF 1083 Query: 143 EHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 +Q I+R+ + V VY L + T++ +L+ K + + Sbjct: 1084 VEEQAIDRV-----HRLTQTVDVVVYKLTVRGTVEARILELQEKKRLLAQAAVEG 1133 >gi|225557429|gb|EEH05715.1| ATP-dependent helicase RIS1 [Ajellomyces capsulatus G186AR] Length = 1083 Score = 83.8 bits (206), Expect = 1e-14, Method: Composition-based stats. Identities = 31/188 (16%), Positives = 60/188 (31%), Gaps = 38/188 (20%) Query: 47 HWKEVHDEKIKALEVIIEKANAA-PIIVAYHFNSDLARLQKAFPQ-----GRTLDKDPCT 100 + + KI+ L I++ + IV F S L +++ R Sbjct: 810 TPEHLASTKIRYLMKILKAESGDYKFIVFSFFTSMLNKIEPFLKDSHIGYVRYDGAMRND 869 Query: 101 IQEW------NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQ--------- 145 ++E N K +L + GLNL + +V +W+ H Sbjct: 870 LREISLDKLRNSPKTRVLLCSLRAGSLGLNLT-AASRVVILEPFWNPVWHSSASSQTIFY 928 Query: 146 ----------------QMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKST 189 Q +E + R + V +Y L +NT++E ++ K Sbjct: 929 SKFQSQKSELTCNQTPQFVEEQAIDRVHRLNQTVDVKIYKLTIKNTVEERIVDLQERKRE 988 Query: 190 IQDLLLNA 197 + + + Sbjct: 989 LANATIEG 996 >gi|225427375|ref|XP_002279753.1| PREDICTED: hypothetical protein [Vitis vinifera] Length = 1084 Score = 83.8 bits (206), Expect = 1e-14, Method: Composition-based stats. Identities = 30/166 (18%), Positives = 67/166 (40%), Gaps = 24/166 (14%) Query: 49 KEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQK---------------AFPQGRT 93 V + + A E N ++V F L L R Sbjct: 872 IGVKTKFLMAFIRFSETMNEK-VLVFSQFLDPLTYLMDQLKYHFHWIVGKEVLYMDGQRD 930 Query: 94 LDKDPCTIQEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERI 151 + + +I +N+ ++ +L A +C G++L G + ++ + W+ +ER Sbjct: 931 VKQRQSSINTFNDPASQVRVLLASTKACSEGISL-VGASRVILLDVVWNPS-----VERQ 984 Query: 152 GVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 ++R + G ++ V++Y+L+ T++E R K + +L+ ++ Sbjct: 985 AISRAYRLGQRKVVYIYHLLTSGTMEEEKYCRQAKKDRLSELVFSS 1030 >gi|310796849|gb|EFQ32310.1| SNF2 family domain-containing protein [Glomerella graminicola M1.001] Length = 1069 Score = 83.8 bits (206), Expect = 1e-14, Method: Composition-based stats. Identities = 27/136 (19%), Positives = 46/136 (33%), Gaps = 17/136 (12%) Query: 68 AAPIIVAYHFNSDLARLQKAF----------PQGRTLDKDPCTIQEWNEGKIP-LLFAHP 116 ++V H L LQ F + + + ++N + Sbjct: 581 GDKVLVFSHSVRLLRILQHLFHNTSYSVTYLDGSVSYEDRQKAVDDFNSDPTQFVFLIST 640 Query: 117 ASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTI 176 + G GLN+ N +V W+ Q R + G R V V+ L++ TI Sbjct: 641 KAGGVGLNIT-SANKVVIVDPHWNPSYDLQA-----QDRAYRIGQVRDVDVFRLVSTGTI 694 Query: 177 DELVLQRLRTKSTIQD 192 +E+V R K + Sbjct: 695 EEIVYARQIYKQQQAN 710 >gi|296826202|ref|XP_002850936.1| SHREC complex subunit Mit1 [Arthroderma otae CBS 113480] gi|238838490|gb|EEQ28152.1| SHREC complex subunit Mit1 [Arthroderma otae CBS 113480] Length = 1445 Score = 83.8 bits (206), Expect = 1e-14, Method: Composition-based stats. Identities = 23/144 (15%), Positives = 54/144 (37%), Gaps = 20/144 (13%) Query: 68 AAPIIVAYHFNSDLARLQKAFPQGRTLD-----------KDPCTIQEWNEGKIP--LLFA 114 +++ F L + + F G +L+ + I +N Sbjct: 933 GHRVLIFSQFLDFLD-IVEDFLDGLSLEHLRLDGRMNSLQKQKNIDAFNAPDSEYFAFLL 991 Query: 115 HPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQN 174 + G G+NL + +V ++ + Q + R + G K+ V V+ L+ + Sbjct: 992 STRAGGVGINL-ATADTVVILDPDFNPHQDIQALSR-----AHRIGQKKKVMVFQLMTRG 1045 Query: 175 TIDELVLQRLRTKSTIQDLLLNAL 198 + +E ++Q + K + +L+ + Sbjct: 1046 SAEEKIMQIGKKKMALDHVLIERM 1069 >gi|157118940|ref|XP_001659258.1| steroid receptor-interacting snf2 domain protein [Aedes aegypti] gi|108875506|gb|EAT39731.1| steroid receptor-interacting snf2 domain protein [Aedes aegypti] Length = 2625 Score = 83.8 bits (206), Expect = 1e-14, Method: Composition-based stats. Identities = 26/112 (23%), Positives = 44/112 (39%), Gaps = 7/112 (6%) Query: 86 KAFPQGRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEH 144 T + I E+N I L + G+NL G N +V F W+ Sbjct: 1468 YRLDGSTTAQEREKLINEFNSNPNIHLFLVSTRAGSLGINL-VGANRVVVFDASWNPCHD 1526 Query: 145 QQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 Q + R + G K+ FVY L+ N +++ + R K + D +++ Sbjct: 1527 TQAV-----CRVYRYGQKKPCFVYRLVVDNCLEKKIYDRQINKQGMSDRIVD 1573 >gi|20259462|gb|AAM13851.1| putative ATPase (ISW2) [Arabidopsis thaliana] Length = 1055 Score = 83.8 bits (206), Expect = 1e-14, Method: Composition-based stats. Identities = 34/220 (15%), Positives = 79/220 (35%), Gaps = 35/220 (15%) Query: 6 KFQRELYCDLQGENIEAFNSASKTVKCLQLA-----------------NGAVYYDEEKHW 48 + Q++ Y L +++EA N+ + + L +A G Y + Sbjct: 427 QMQKQYYKALLQKDLEAVNAGGERKRLLNIAMQLRKCCNHPYLFQGAEPGPPYTTGDHLI 486 Query: 49 KEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTL----------DKDP 98 + + K + +++ L L+ L D+ Sbjct: 487 TNAGKMVLLDKLLPKLKERDSRVLIFSQMTRLLDILEDYLMYRGYLYCRIDGNTGGDERD 546 Query: 99 CTIQEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 +I+ +N+ + + + G G+NL ++++ + W+ + Q R Sbjct: 547 ASIEAYNKPGSEKFVFLLSTRAGGLGINL-ATADVVILYDSDWNPQVDLQA-----QDRA 600 Query: 157 RQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + G K+ V V+ ++ I+E V++R K + L++ Sbjct: 601 HRIGQKKEVQVFRFCTESAIEEKVIERAYKKLALDALVIQ 640 >gi|297829170|ref|XP_002882467.1| hypothetical protein ARALYDRAFT_477943 [Arabidopsis lyrata subsp. lyrata] gi|297328307|gb|EFH58726.1| hypothetical protein ARALYDRAFT_477943 [Arabidopsis lyrata subsp. lyrata] Length = 1055 Score = 83.8 bits (206), Expect = 1e-14, Method: Composition-based stats. Identities = 34/220 (15%), Positives = 79/220 (35%), Gaps = 35/220 (15%) Query: 6 KFQRELYCDLQGENIEAFNSASKTVKCLQLA-----------------NGAVYYDEEKHW 48 + Q++ Y L +++EA N+ + + L +A G Y + Sbjct: 427 QMQKQYYKALLQKDLEAVNAGGERKRLLNIAMQLRKCCNHPYLFQGAEPGPPYTTGDHLI 486 Query: 49 KEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTL----------DKDP 98 + + K + +++ L L+ L D+ Sbjct: 487 TNAGKMVLLDKLLPKLKERDSRVLIFSQMTRLLDILEDYLMYRGYLYCRIDGNTGGDERD 546 Query: 99 CTIQEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 +I+ +N+ + + + G G+NL ++++ + W+ + Q R Sbjct: 547 ASIEAYNKPGSEKFVFLLSTRAGGLGINL-ATADVVILYDSDWNPQVDLQA-----QDRA 600 Query: 157 RQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + G K+ V V+ ++ I+E V++R K + L++ Sbjct: 601 HRIGQKKEVQVFRFCTESAIEEKVIERAYKKLALDALVIQ 640 >gi|226286603|gb|EEH42116.1| DNA repair protein RAD16 [Paracoccidioides brasiliensis Pb18] Length = 1092 Score = 83.8 bits (206), Expect = 1e-14, Method: Composition-based stats. Identities = 39/207 (18%), Positives = 73/207 (35%), Gaps = 26/207 (12%) Query: 4 YHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVII 63 Y R+ + Q + + + + K Q Y K + + +E Sbjct: 876 YSAITRQGFEKFQAYQLSSRQNPKQAKKFGQ------YEGPHTKTKALISHLLDTIEESK 929 Query: 64 EKANAAPI--IVAYHFNSDLARLQKAFPQGRT-----------LDKDPCTIQEWNEGK-I 109 + API IV + S L +Q A L + + + + + Sbjct: 930 KSPEKAPIKSIVFSSWTSHLDLIQIALEDNGITSFTRLDGTMSLKQRNAALDAFRDDDNV 989 Query: 110 PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYY 169 +L A + G GLNL G + ++ Q ++R+ + G R V Sbjct: 990 TILLATLGAGGVGLNLTSGSRAYIM-EPQYNPAAIAQAVDRV-----HRLGQTREVTTIQ 1043 Query: 170 LIAQNTIDELVLQRLRTKSTIQDLLLN 196 I +++I+E + + R K + D+ LN Sbjct: 1044 FIMKDSIEEKIAELARKKQQMADMSLN 1070 >gi|296809169|ref|XP_002844923.1| DNA repair protein RAD5 [Arthroderma otae CBS 113480] gi|238844406|gb|EEQ34068.1| DNA repair protein RAD5 [Arthroderma otae CBS 113480] Length = 919 Score = 83.8 bits (206), Expect = 1e-14, Method: Composition-based stats. Identities = 34/182 (18%), Positives = 70/182 (38%), Gaps = 24/182 (13%) Query: 27 SKTVKCLQLANGAVYYDEEKHWKEVHDE----KIKALEVIIEKAN---AAPIIVAYHFNS 79 ++ C L + A E+ + EV E KI+AL I+ +V + S Sbjct: 716 AEIKDCSALVSPAAELGEDSNEVEVDSESTSSKIQALIKILMAKGQVLGTKTVVFSQWTS 775 Query: 80 DLARLQKAFP-----------QGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYG 128 L ++ + + +D + ++ + ++ A C GLNL Sbjct: 776 FLDLIEPQLSLNNINFARIDGKMNSAKRDAAMRKLTHDPECTVMLASLNVCSVGLNL-VA 834 Query: 129 GNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKS 188 N ++ WW Q ++R+ + G R ++ L+ +++I++ VL + K Sbjct: 835 ANQVILADSWWAPAIEDQAVDRV-----YRLGQTRPTTIWRLVMEDSIEDRVLDIQKEKR 889 Query: 189 TI 190 + Sbjct: 890 EL 891 >gi|145349184|ref|XP_001419020.1| predicted protein [Ostreococcus lucimarinus CCE9901] gi|144579250|gb|ABO97313.1| predicted protein [Ostreococcus lucimarinus CCE9901] Length = 956 Score = 83.8 bits (206), Expect = 1e-14, Method: Composition-based stats. Identities = 32/222 (14%), Positives = 77/222 (34%), Gaps = 39/222 (17%) Query: 6 KFQRELYCDLQGENIEAFNSASKTVKCLQLA-----------------NGAVYYDEEKHW 48 + Q+ Y + ++I+ NS + + L + G Y + Sbjct: 332 EMQKTFYKRILQKDIDIVNSGADRSRLLNIVMQLRKCCNHPYLFQGAEPGPPYITGDHLI 391 Query: 49 KEVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARL---------QKAFPQGRTLDKD 97 + K+ L+ ++ + + +++ L L Q G T Sbjct: 392 E--SSGKLALLDKLLPRLMQRGSRVLIFSQMTRLLDILEDYLMYRNYQYCRIDGSTDGAV 449 Query: 98 PCT-IQEWNE--GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 I +N+ + + G G+NL + ++ + W+ + Q ++R Sbjct: 450 REDHIDAFNKEGSEKFCFLLSTRAGGLGINL-ATADTVIIYDSDWNPQMDLQAMDR---- 504 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + G K+ V V+ +++E V+++ K + L++ Sbjct: 505 -AHRIGQKKEVQVFRFCTDGSVEEKVIEKAYKKLALDALVIQ 545 >gi|302678131|ref|XP_003028748.1| hypothetical protein SCHCODRAFT_112243 [Schizophyllum commune H4-8] gi|300102437|gb|EFI93845.1| hypothetical protein SCHCODRAFT_112243 [Schizophyllum commune H4-8] Length = 1327 Score = 83.8 bits (206), Expect = 1e-14, Method: Composition-based stats. Identities = 30/160 (18%), Positives = 61/160 (38%), Gaps = 17/160 (10%) Query: 56 IKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRT----------LDKDPCTIQEW- 104 ++ALE + ++ +I+ + + L+ L + + ++ + Sbjct: 1150 MEALERLFKEKPDEKVILVSQWTTALSLLSDYLSERHIAHVKYQGDMSRNARDAAVRAFM 1209 Query: 105 NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA 164 + K ++ G GLNL N ++ L W Q +R+ + G R Sbjct: 1210 AKDKAKVMLMSLKCGGVGLNLTRANN-VISLDLGWSEAVEAQAFDRV-----HRLGQTRK 1263 Query: 165 VFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIH 204 V V L+ NT+++ +L K+ + D L K + I Sbjct: 1264 VRVERLVIDNTVEDRILGLQERKALLADGALGEGKGKKIG 1303 >gi|241952923|ref|XP_002419183.1| ATP-dependent helicase, putative; chromatin structure-remodeling complex protein, putative; nuclear protein Sth1/Nps1 homologue, putative [Candida dubliniensis CD36] gi|223642523|emb|CAX42772.1| ATP-dependent helicase, putative [Candida dubliniensis CD36] Length = 1300 Score = 83.8 bits (206), Expect = 1e-14, Method: Composition-based stats. Identities = 26/144 (18%), Positives = 54/144 (37%), Gaps = 18/144 (12%) Query: 68 AAPIIVAYHFNSDLARL---------QKAFPQGRTL-DKDPCTIQEWNEGKIPLL--FAH 115 +++ + + + + G T D+ ++ +N Sbjct: 831 GHRVLMFFQMTQIMDIMEDFLRWRDMKYLRLDGSTKADERQDMLKVFNAPDSEYFCFLLS 890 Query: 116 PASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNT 175 + G GLNLQ + ++ F W+ + Q R + G K V + LI ++ Sbjct: 891 TRAGGLGLNLQT-ADTVIIFDTDWNPHQDLQA-----QDRAHRIGQKNEVRILRLITNDS 944 Query: 176 IDELVLQRLRTKSTIQDLLLNALK 199 ++E++L+R K I ++ A K Sbjct: 945 VEEVILERAHQKLDIDGKVIQAGK 968 >gi|326478019|gb|EGE02029.1| chromatin remodeling complex subunit Chd3 [Trichophyton equinum CBS 127.97] Length = 1412 Score = 83.8 bits (206), Expect = 1e-14, Method: Composition-based stats. Identities = 21/143 (14%), Positives = 51/143 (35%), Gaps = 18/143 (12%) Query: 68 AAPIIVAYHFNSDLARLQK----------AFPQGRTLDKDPCTIQEWNEG--KIPLLFAH 115 +++ F L ++ T K I +N + Sbjct: 1006 GHRVLIFSQFLDFLDIVEDFLDGLGLAHLRLDGSMTSLKKQKNIDAYNAPGSEYFAFLLS 1065 Query: 116 PASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNT 175 + G G+NL + ++ ++ + Q + R + G K+ V V+ L+ + + Sbjct: 1066 TRAGGVGINL-ATADTVIILDPDFNPHQDIQALSR-----AHRIGQKKKVMVFQLMTRGS 1119 Query: 176 IDELVLQRLRTKSTIQDLLLNAL 198 +E ++Q + K + +L+ + Sbjct: 1120 AEEKIMQIGKKKMALDHVLIERM 1142 >gi|326473174|gb|EGD97183.1| hypothetical protein TESG_04598 [Trichophyton tonsurans CBS 112818] Length = 1422 Score = 83.8 bits (206), Expect = 1e-14, Method: Composition-based stats. Identities = 21/143 (14%), Positives = 51/143 (35%), Gaps = 18/143 (12%) Query: 68 AAPIIVAYHFNSDLARLQK----------AFPQGRTLDKDPCTIQEWNEG--KIPLLFAH 115 +++ F L ++ T K I +N + Sbjct: 910 GHRVLIFSQFLDFLDIVEDFLDGLGLAHLRLDGSMTSLKKQKNIDAYNAPGSEYFAFLLS 969 Query: 116 PASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNT 175 + G G+NL + ++ ++ + Q + R + G K+ V V+ L+ + + Sbjct: 970 TRAGGVGINL-ATADTVIILDPDFNPHQDIQALSR-----AHRIGQKKKVMVFQLMTRGS 1023 Query: 176 IDELVLQRLRTKSTIQDLLLNAL 198 +E ++Q + K + +L+ + Sbjct: 1024 AEEKIMQIGKKKMALDHVLIERM 1046 >gi|327308268|ref|XP_003238825.1| chromatin remodeling complex subunit Chd3 [Trichophyton rubrum CBS 118892] gi|326459081|gb|EGD84534.1| chromatin remodeling complex subunit Chd3 [Trichophyton rubrum CBS 118892] Length = 1376 Score = 83.8 bits (206), Expect = 1e-14, Method: Composition-based stats. Identities = 21/143 (14%), Positives = 51/143 (35%), Gaps = 18/143 (12%) Query: 68 AAPIIVAYHFNSDLARLQK----------AFPQGRTLDKDPCTIQEWNEG--KIPLLFAH 115 +++ F L ++ T K I +N + Sbjct: 864 GHRVLIFSQFLDFLDIVEDFLDGLGLEHLRLDGSMTSLKKQKNIDAYNAPGSEYFAFLLS 923 Query: 116 PASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNT 175 + G G+NL + ++ ++ + Q + R + G K+ V V+ L+ + + Sbjct: 924 TRAGGVGINL-ATADTVIILDPDFNPHQDIQALSR-----AHRIGQKKKVMVFQLMTRGS 977 Query: 176 IDELVLQRLRTKSTIQDLLLNAL 198 +E ++Q + K + +L+ + Sbjct: 978 AEEKIMQIGKKKMALDHVLIERM 1000 >gi|152984418|ref|YP_001349818.1| SNF2 family helicase [Pseudomonas aeruginosa PA7] gi|150959576|gb|ABR81601.1| helicase, SNF2 family [Pseudomonas aeruginosa PA7] Length = 658 Score = 83.8 bits (206), Expect = 1e-14, Method: Composition-based stats. Identities = 33/154 (21%), Positives = 58/154 (37%), Gaps = 18/154 (11%) Query: 55 KIKALEVIIEKANAA-PIIVAYHFNSDLARLQKAFPQGRT----------LDKDPCTIQE 103 K++ ++ + +A +I+ F +A L++ Q L K I Sbjct: 493 KVRVAMDLLSELDAEDKVILFCEFKPTVAALKELCEQAGHGCVTLVGNDSLTKRQKAIDR 552 Query: 104 WN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFK 162 + + + A+ G G NL N + F L W + +Q +R + G Sbjct: 553 FQQDPDCRVFICTTAAAGTGNNLT-AANYVFFLGLPWTPGQQEQAEDR-----AYRNGQL 606 Query: 163 RAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 R V V + + TIDE + Q L K + L+ Sbjct: 607 RMVVVKIPLVEGTIDEQLWQLLNAKRQVAQDLIE 640 >gi|193083817|gb|ACF09499.1| helicase SNF2/RAD54 family [uncultured marine crenarchaeote SAT1000-23-F7] Length = 571 Score = 83.8 bits (206), Expect = 1e-14, Method: Composition-based stats. Identities = 38/149 (25%), Positives = 62/149 (41%), Gaps = 12/149 (8%) Query: 56 IKALEVIIEKANAAPIIVAYHFNSDL--ARLQKAFP----QGRTLDKDPCTIQEWNEGKI 109 I+ ++ I+E + + + L LQ+ P G+T I + G Sbjct: 403 IEFVKNIMEIEESVVVFCHHKAIHRLLHESLQEFHPSSIIGGQTDKDRQANIDRFQNGDT 462 Query: 110 PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYY 169 L+ A + G+NL ++F L W H+Q +R+ + G K VF YY Sbjct: 463 KLMIAGLRAGNLGINLTR-AKYVIFGELDWSPAIHRQAEDRL-----HRIGQKNTVFAYY 516 Query: 170 LIAQNTIDELVLQRLRTKSTIQDLLLNAL 198 LI T+DE V L KS D +++ + Sbjct: 517 LIGNGTLDEHVANILVDKSYEIDTIMDEV 545 >gi|196008026|ref|XP_002113879.1| hypothetical protein TRIADDRAFT_27056 [Trichoplax adhaerens] gi|190584283|gb|EDV24353.1| hypothetical protein TRIADDRAFT_27056 [Trichoplax adhaerens] Length = 871 Score = 83.8 bits (206), Expect = 1e-14, Method: Composition-based stats. Identities = 22/155 (14%), Positives = 56/155 (36%), Gaps = 20/155 (12%) Query: 55 KIKALEVIIEKAN--AAPIIVAYHFNSDLARLQ----------KAFPQGRTLDKDPCTIQ 102 K+ LE +++K +++ L L+ + + ++ I Sbjct: 583 KLIVLEKMLKKLKETGNRVLIFSQMTKMLDILEDFLDGLNYEYERIDGSTSGNERQALID 642 Query: 103 EWNEGK--IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 ++N + G G+NL + ++ + W+ Q +R + G Sbjct: 643 KFNAPNATQFCFLLSTRAGGLGINL-ATADTVIIYDSDWNPHNDIQA-----FSRAHRIG 696 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 V +Y + + +++E + Q + K + L++ Sbjct: 697 QSNKVMIYRFVTRFSVEERITQVAKKKMMLTHLIV 731 >gi|22330875|ref|NP_187291.2| CHR11 (CHROMATIN-REMODELING PROTEIN 11); ATP binding / DNA binding / DNA-dependent ATPase/ helicase/ hydrolase, acting on acid anhydrides, in phosphorus-containing anhydrides / nucleic acid binding / nucleosome binding [Arabidopsis thaliana] Length = 1055 Score = 83.8 bits (206), Expect = 1e-14, Method: Composition-based stats. Identities = 34/220 (15%), Positives = 79/220 (35%), Gaps = 35/220 (15%) Query: 6 KFQRELYCDLQGENIEAFNSASKTVKCLQLA-----------------NGAVYYDEEKHW 48 + Q++ Y L +++EA N+ + + L +A G Y + Sbjct: 427 QMQKQYYKALLQKDLEAVNAGGERKRLLNIAMQLRKCCNHPYLFQGAEPGPPYTTGDHLI 486 Query: 49 KEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTL----------DKDP 98 + + K + +++ L L+ L D+ Sbjct: 487 TNAGKMVLLDKLLPKLKERDSRVLIFSQMTRLLDILEDYLMYRGYLYCRIDGNTGGDERD 546 Query: 99 CTIQEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 +I+ +N+ + + + G G+NL ++++ + W+ + Q R Sbjct: 547 ASIEAYNKPGSEKFVFLLSTRAGGLGINL-ATADVVILYDSDWNPQVDLQA-----QDRA 600 Query: 157 RQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + G K+ V V+ ++ I+E V++R K + L++ Sbjct: 601 HRIGQKKEVQVFRFCTESAIEEKVIERAYKKLALDALVIQ 640 >gi|68568746|sp|Q8RWY3|ISW2_ARATH RecName: Full=Putative chromatin-remodeling complex ATPase chain; AltName: Full=ISW2-like; AltName: Full=Sucrose nonfermenting protein 2 homolog gi|6437558|gb|AAF08585.1|AC011623_18 putative ATPase (ISW2-like) [Arabidopsis thaliana] Length = 1057 Score = 83.8 bits (206), Expect = 1e-14, Method: Composition-based stats. Identities = 34/220 (15%), Positives = 79/220 (35%), Gaps = 35/220 (15%) Query: 6 KFQRELYCDLQGENIEAFNSASKTVKCLQLA-----------------NGAVYYDEEKHW 48 + Q++ Y L +++EA N+ + + L +A G Y + Sbjct: 427 QMQKQYYKALLQKDLEAVNAGGERKRLLNIAMQLRKCCNHPYLFQGAEPGPPYTTGDHLI 486 Query: 49 KEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTL----------DKDP 98 + + K + +++ L L+ L D+ Sbjct: 487 TNAGKMVLLDKLLPKLKERDSRVLIFSQMTRLLDILEDYLMYRGYLYCRIDGNTGGDERD 546 Query: 99 CTIQEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 +I+ +N+ + + + G G+NL ++++ + W+ + Q R Sbjct: 547 ASIEAYNKPGSEKFVFLLSTRAGGLGINL-ATADVVILYDSDWNPQVDLQA-----QDRA 600 Query: 157 RQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + G K+ V V+ ++ I+E V++R K + L++ Sbjct: 601 HRIGQKKEVQVFRFCTESAIEEKVIERAYKKLALDALVIQ 640 >gi|223460528|gb|AAI36645.1| SMARCA4 protein [Homo sapiens] Length = 1681 Score = 83.8 bits (206), Expect = 1e-14, Method: Composition-based stats. Identities = 30/160 (18%), Positives = 62/160 (38%), Gaps = 20/160 (12%) Query: 52 HDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAF---------PQGRTLDKDPCT 100 K + L+ I+ +A +++ S + ++ F G T +D Sbjct: 1142 ASGKFELLDRILPKLRATNHKVLLFCQMTSLMTIMEDYFAYRGFKYLRLDGTTKAEDRGM 1201 Query: 101 I-QEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 + + +NE + + + G GLNLQ + ++ F W+ + Q R Sbjct: 1202 LLKTFNEPGSEYFIFLLSTRAGGLGLNLQ-SADTVIIFDSDWNPHQDLQA-----QDRAH 1255 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + G + V V L N+++E +L + K + ++ A Sbjct: 1256 RIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQA 1295 >gi|156358635|ref|XP_001624622.1| predicted protein [Nematostella vectensis] gi|156211413|gb|EDO32522.1| predicted protein [Nematostella vectensis] Length = 659 Score = 83.8 bits (206), Expect = 1e-14, Method: Composition-based stats. Identities = 31/181 (17%), Positives = 64/181 (35%), Gaps = 39/181 (21%) Query: 55 KIKALEVIIEKAN--AAPIIVAYHFNSDLARLQK-------------------------- 86 K+ L IIE++ I++ S L+ +++ Sbjct: 399 KMVLLFEIIEESLKLGEKILIFSQSLSTLSIIEEFLNSRVVPFFPGRQSDPSTKWARNKS 458 Query: 87 --AFPQGRTLDKDPCTIQEWNEG---KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDL 141 + + I +N+ ++ L + G+NL G + +V F W+ Sbjct: 459 YFRLDGSTSAQERERLINAFNDNSSNEVLLFMLSTRAGCLGVNL-VGASRVVVFDSSWNP 517 Query: 142 EEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 Q + R + G R +Y LIA T+++ + R +K + + +++ L E Sbjct: 518 CHDVQAV-----CRVYRYGQVRPCHIYRLIATGTMEKKIYDRQVSKQGVANRVVDELNPE 572 Query: 202 T 202 Sbjct: 573 A 573 >gi|315054981|ref|XP_003176865.1| chromodomain-helicase-DNA-binding protein 5 [Arthroderma gypseum CBS 118893] gi|311338711|gb|EFQ97913.1| chromodomain-helicase-DNA-binding protein 5 [Arthroderma gypseum CBS 118893] Length = 1513 Score = 83.8 bits (206), Expect = 1e-14, Method: Composition-based stats. Identities = 21/143 (14%), Positives = 51/143 (35%), Gaps = 18/143 (12%) Query: 68 AAPIIVAYHFNSDLARLQK----------AFPQGRTLDKDPCTIQEWNEG--KIPLLFAH 115 +++ F L ++ T K I +N + Sbjct: 1006 GHRVLIFSQFLDFLDIVEDFLDGLGLTHLRLDGSMTSLKKQKNIDAYNAPGSEYFAFLLS 1065 Query: 116 PASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNT 175 + G G+NL + ++ ++ + Q + R + G K+ V V+ L+ + + Sbjct: 1066 TRAGGVGINL-ATADTVIILDPDFNPHQDIQALSR-----AHRIGQKKKVMVFQLMTRGS 1119 Query: 176 IDELVLQRLRTKSTIQDLLLNAL 198 +E ++Q + K + +L+ + Sbjct: 1120 AEEKIMQIGKKKMALDHVLIERM 1142 >gi|218289657|ref|ZP_03493877.1| SNF2-related protein [Alicyclobacillus acidocaldarius LAA1] gi|218240307|gb|EED07490.1| SNF2-related protein [Alicyclobacillus acidocaldarius LAA1] Length = 572 Score = 83.8 bits (206), Expect = 1e-14, Method: Composition-based stats. Identities = 31/151 (20%), Positives = 68/151 (45%), Gaps = 17/151 (11%) Query: 54 EKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQ---------GRTLDKDPCTIQEW 104 K++A+ ++E A +I+ + + L + G ++E Sbjct: 376 AKVEAVLKMLEDAPEK-VIIFTEYRASQDFLMYTLKKHGISAVPFRGGFRRGKKDWMREL 434 Query: 105 NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA 164 KI +L A S G G+NLQ+ + ++ + L W+ +Q I RI + G + Sbjct: 435 FSKKIRVLVA-TESGGEGINLQF-CHHMINYDLPWNPMRLEQRIGRI-----HRLGQTHS 487 Query: 165 VFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 + +L+ ++TI+E +++ L+ K + + ++ Sbjct: 488 CHIVHLVTKDTIEEHIMEILQEKVRMFEAVI 518 >gi|297279826|ref|XP_001093777.2| PREDICTED: chromodomain helicase DNA binding protein 1-like [Macaca mulatta] Length = 617 Score = 83.8 bits (206), Expect = 1e-14, Method: Composition-based stats. Identities = 35/217 (16%), Positives = 80/217 (36%), Gaps = 35/217 (16%) Query: 1 MKQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDE--------EKHWKEVH 52 MK F+ E + ++ N S+ KC + +D H E Sbjct: 14 MKDLDAFENET-----AKKVKLQNILSQLRKC---VDHPYLFDGVEPEPFEVGDHLIE-A 64 Query: 53 DEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAFP---------QGRTLDKDPC-T 100 K+ L+ ++ + +++ L LQ G ++ Sbjct: 65 SGKLYLLDKLLAFLYSGGHRVLLFSQMTQMLDILQDYMDYRGYSYERVDGSVRGEERHLA 124 Query: 101 IQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 I+ + + I + + G G+NL + ++F ++ + Q R + G Sbjct: 125 IKNFGQQPIFVFLLSTRAGGVGMNLT-AADTVIFVDSDFNPQNDLQAAAR-----AHRIG 178 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 ++V V LI ++T++E+V ++ +K + ++++ Sbjct: 179 QNKSVKVIRLIGRDTVEEIVSRKAASKLQLTNMIIEG 215 >gi|240279479|gb|EER42984.1| DNA excision repair protein [Ajellomyces capsulatus H143] Length = 979 Score = 83.8 bits (206), Expect = 1e-14, Method: Composition-based stats. Identities = 28/138 (20%), Positives = 47/138 (34%), Gaps = 17/138 (12%) Query: 66 ANAAPIIVAYHFNSDLARLQKAFP----------QGRTLDKDPCTIQEWNEG-KIPLLFA 114 N ++V H L LQ F + + + +N + + Sbjct: 576 GNGDKVLVFSHSVRLLKMLQMLFKHTSYNVSYLDGAMSYEDRAKVVDNFNADIREFVFLI 635 Query: 115 HPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQN 174 + G GLN+ N +V W+ Q R + G R V V+ L++ Sbjct: 636 STRAGGVGLNIT-SANKVVVVDPNWNPAYDLQA-----QDRAYRIGQARDVEVFRLVSAG 689 Query: 175 TIDELVLQRLRTKSTIQD 192 TI+E+V R K + Sbjct: 690 TIEEIVYARQIYKQQQAN 707 >gi|164426264|ref|XP_960829.2| hypothetical protein NCU10337 [Neurospora crassa OR74A] gi|157071265|gb|EAA31593.2| conserved hypothetical protein [Neurospora crassa OR74A] Length = 1404 Score = 83.8 bits (206), Expect = 1e-14, Method: Composition-based stats. Identities = 28/161 (17%), Positives = 60/161 (37%), Gaps = 20/161 (12%) Query: 52 HDEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQ----------KAFPQGRTLDKDPC 99 K+ LEV++ K +++ F L L+ + ++ + Sbjct: 829 ASSKLLLLEVMLPKLRERGHRVLIFSQFLDQLTILEDFLAGMDLPYQRLDGSQSSMEKQK 888 Query: 100 TIQEWNEGKIPLL--FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 I +N L + G G+NL + ++ W+ + Q + R Sbjct: 889 RIDAFNAPDSQLFCMLLSTRAGGVGINL-ATADTVIILDPDWNPHQDIQALSR-----AH 942 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNAL 198 + G ++ V + L+ ++ +E +LQ R K + LL+ + Sbjct: 943 RIGQQKKVLCFQLMTVDSAEEKILQIGRKKMALDHLLIETM 983 >gi|14091823|gb|AAK53826.1|AC011806_3 Putative SWI/SNF related, matrix associated, actin dependent regulator of chromatin [Oryza sativa] gi|15528681|dbj|BAB64747.1| putative DNA-dependent ATPase [Oryza sativa Japonica Group] Length = 1122 Score = 83.8 bits (206), Expect = 1e-14, Method: Composition-based stats. Identities = 38/220 (17%), Positives = 80/220 (36%), Gaps = 35/220 (15%) Query: 6 KFQRELYCDLQGENIEAFNSASKTVKCLQLA-----------------NGAVYYDEEKHW 48 + Q++ Y L +++E N+ + + L +A G Y E Sbjct: 469 QMQKQYYRALLQKDLEVINAGGERKRLLNIAMQLRKCCNHPYLFQGAEPGPPYTTGEHLV 528 Query: 49 KEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARL---------QKAFPQGRTLDKDP- 98 + + + K + +++ L L Q G T +D Sbjct: 529 ENAGKMVLLDKLLPKLKDRDSRVLIFSQMTRLLDILEDYLMYRGYQYCRIDGNTGGEDRD 588 Query: 99 CTIQEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 +I+ +N+ + + + G G+NL +++V + W+ + Q R Sbjct: 589 ASIEAFNKPGSEKFVFLLSTRAGGLGINL-ATADVVVLYDSDWNPQADLQA-----QDRA 642 Query: 157 RQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + G K+ V V+ + TI+E V++R K + L++ Sbjct: 643 HRIGQKKEVQVFRFCTEYTIEEKVIERAYKKLALDALVIQ 682 >gi|194384656|dbj|BAG59488.1| unnamed protein product [Homo sapiens] Length = 979 Score = 83.8 bits (206), Expect = 1e-14, Method: Composition-based stats. Identities = 24/160 (15%), Positives = 52/160 (32%), Gaps = 20/160 (12%) Query: 45 EKHWKEVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQ----------KAFPQGR 92 E K+ L+ ++ K +++ L L+ + G Sbjct: 30 EGGALIKSSGKLMLLQKMLRKLKEQGHRVLIFSQMTKMLDLLEDFLDYEGYKYERIDGGI 89 Query: 93 TLDKDPCTIQEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 T I +N + + G G+NL + ++ F W+ Q Sbjct: 90 TGALRQEAIDRFNAPGAQQFCFLLSTRAGGLGINL-ATTDTVIIFDSDWNPHNDIQA--- 145 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 +R + G V +Y + + +++E + Q + K + Sbjct: 146 --FSRAHRIGQANKVMIYRFVTRASVEERITQVAKRKMML 183 >gi|328855031|gb|EGG04160.1| hypothetical protein MELLADRAFT_117156 [Melampsora larici-populina 98AG31] Length = 1185 Score = 83.8 bits (206), Expect = 1e-14, Method: Composition-based stats. Identities = 34/161 (21%), Positives = 62/161 (38%), Gaps = 22/161 (13%) Query: 47 HWKEVHDEKI-KALEVI----IEKANAAPIIVAYHFNSDLARLQKAFP---------QGR 92 + + K+ LE + +E + +++ + S L + + QG Sbjct: 1000 QYAVIPSAKLVYLLEELKRLRVEAPDDR-VVILSQWTSFLDIVAQYLDENDFQYARYQGS 1058 Query: 93 TLDKDPCT-IQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERI 151 K + E+ +G PL+ G GLNL G N ++ L W Q +R+ Sbjct: 1059 MDSKARTAAVHEFQKGDKPLMLMSLKCGGVGLNLTRG-NRVINLDLAWTPASEAQAFDRV 1117 Query: 152 GVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQD 192 + G + V V L+ NT+++ +L+ K I D Sbjct: 1118 -----HRLGQTKIVNVKRLMINNTVEQRMLELQLKKQMITD 1153 >gi|115647222|ref|XP_797049.2| PREDICTED: similar to MGC108253 protein, partial [Strongylocentrotus purpuratus] Length = 1279 Score = 83.8 bits (206), Expect = 1e-14, Method: Composition-based stats. Identities = 28/156 (17%), Positives = 65/156 (41%), Gaps = 19/156 (12%) Query: 57 KALEVIIEKANAAPIIVAYHFNSDLARLQKAFP---------QGRT-LDKDPCTIQEWNE 106 K L + E+ + +++ F L +Q+ G+T + + I ++N+ Sbjct: 1128 KMLADLKEQ--GSRVLLFSQFVMVLDIVQEYLKIRGHKFVRMDGQTPVAERAQLIDKFNK 1185 Query: 107 GK-IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 + + + G G+NL N ++ + ++ +Q +R + G R V Sbjct: 1186 NDSVFIFMLSTRAGGVGINLT-AANTVILHDIDFNPYNDKQAEDRC-----HRVGQTREV 1239 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 V L+++ TI+E +L + K ++ + + + E Sbjct: 1240 SVIRLVSKQTIEEGMLSCAKYKLKLEKQMTSGISGE 1275 >gi|296425383|ref|XP_002842221.1| hypothetical protein [Tuber melanosporum Mel28] gi|295638482|emb|CAZ86412.1| unnamed protein product [Tuber melanosporum] Length = 1480 Score = 83.8 bits (206), Expect = 1e-14, Method: Composition-based stats. Identities = 22/143 (15%), Positives = 55/143 (38%), Gaps = 18/143 (12%) Query: 68 AAPIIVAYHFNSDLARLQ----------KAFPQGRTLDKDPCTIQEWNEG--KIPLLFAH 115 +++ F L L+ + G + + I +N K Sbjct: 1029 GHRVLMFTQFLGMLDILEDFLFALDLKYQRLDGGVSTLERQKRIDSFNAPDSKYFAFMLS 1088 Query: 116 PASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNT 175 + G G+NL + ++ ++ + Q + R + G + V V++L+ ++T Sbjct: 1089 TRAGGVGINL-ATADTVIILDPDFNPHQDIQALSR-----AHRIGQTKRVQVFHLVTRDT 1142 Query: 176 IDELVLQRLRTKSTIQDLLLNAL 198 +E ++Q + K ++ L++ + Sbjct: 1143 AEEKIIQIGKKKLSLDHLIIEKM 1165 >gi|256075325|ref|XP_002573970.1| excision repair helicase ercc-6-related [Schistosoma mansoni] gi|238659162|emb|CAZ30203.1| excision repair helicase ercc-6-related [Schistosoma mansoni] Length = 1323 Score = 83.8 bits (206), Expect = 1e-14, Method: Composition-based stats. Identities = 26/154 (16%), Positives = 48/154 (31%), Gaps = 31/154 (20%) Query: 67 NAAPIIVAYHFNSDLARLQK----------AFPQGRTLDKDPCTIQEWNEG--------- 107 +++ L L++ + + I+ +N Sbjct: 561 QGHKVLLFSQSRRMLTLLERLVQLMKFSYLRMDGTTPVSQRHELIRRFNYRSTSDSEKID 620 Query: 108 ------KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGF 161 I L G G+NL +L+ + W+ Q ER + G Sbjct: 621 RTSDHLDIFLFLLTTRVGGLGVNLTSANRVLI-YDPDWNPTTDLQARERAW-----RIGQ 674 Query: 162 KRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 R V +Y L+ TI+E + R K + + +L Sbjct: 675 SRDVVIYRLLTSGTIEEKIYHRQIFKQFLTNRIL 708 >gi|325092609|gb|EGC45919.1| conserved hypothetical protein [Ajellomyces capsulatus H88] Length = 1032 Score = 83.8 bits (206), Expect = 1e-14, Method: Composition-based stats. Identities = 28/138 (20%), Positives = 47/138 (34%), Gaps = 17/138 (12%) Query: 66 ANAAPIIVAYHFNSDLARLQKAFP----------QGRTLDKDPCTIQEWNEG-KIPLLFA 114 N ++V H L LQ F + + + +N + + Sbjct: 629 GNGDKVLVFSHSVRLLKMLQMLFKHTSYNVSYLDGAMSYEDRAKVVDNFNADIREFVFLI 688 Query: 115 HPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQN 174 + G GLN+ N +V W+ Q R + G R V V+ L++ Sbjct: 689 STRAGGVGLNIT-SANKVVVVDPNWNPAYDLQA-----QDRAYRIGQARDVEVFRLVSAG 742 Query: 175 TIDELVLQRLRTKSTIQD 192 TI+E+V R K + Sbjct: 743 TIEEIVYARQIYKQQQAN 760 >gi|327538790|gb|EGF25438.1| SNF2 family helicase [Rhodopirellula baltica WH47] Length = 914 Score = 83.8 bits (206), Expect = 1e-14, Method: Composition-based stats. Identities = 43/190 (22%), Positives = 79/190 (41%), Gaps = 30/190 (15%) Query: 28 KTVKCL---QLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAP---IIVAYHFNSDL 81 + KCL ++A + Y +++ + + K++ L ++E A P I++ + L Sbjct: 605 RMQKCLLMARMACDSTYLLDQEADE--YSSKLERLGELLEGLIADPTRKIVLFSEWRRML 662 Query: 82 ARLQKAFPQ---------GRTLDKDPCTI--QEWNEGKIPLLFAHPASCGHGLNLQYGGN 130 R++ Q G+ K I + N+ + + + GLNLQ N Sbjct: 663 TRIENRLDQIGCDYVRLDGQVPQKKRAAIVSRFQNDPECRV-INMTNAGSTGLNLQ-AAN 720 Query: 131 ILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQN----TIDELVLQRLRT 186 ++ L W+ +Q I R + G + V VY L+ + TI+E +L L + Sbjct: 721 TVINVDLPWNPAVLEQRIAR-----AYRMGQENPVHVYKLVTTSEPTPTIEEGLLTTLAS 775 Query: 187 KSTIQDLLLN 196 K + D LN Sbjct: 776 KQDLADASLN 785 >gi|307213762|gb|EFN89100.1| Helicase ARIP4 [Harpegnathos saltator] Length = 3154 Score = 83.8 bits (206), Expect = 1e-14, Method: Composition-based stats. Identities = 35/161 (21%), Positives = 57/161 (35%), Gaps = 29/161 (18%) Query: 59 LEVIIEKANAAPIIVAYHFN-----SDLARLQKAFPQGRTLD-----------------K 96 LE I + F LAR +P G+T D + Sbjct: 2061 LEEAIRLGDRVLAFSQSLFTLNLIEDFLARNSLKYPDGQTDDWIKNVNYYRLDGSTSALE 2120 Query: 97 DPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTR 155 I E+N KI L + G+NL G N + F W+ Q + R Sbjct: 2121 REKLINEFNSNPKIHLFLVSTRAGSLGINL-VGANRAIVFDASWNPCHDTQAV-----CR 2174 Query: 156 QRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + G ++ FVY L+ N ++ + R +K + D +++ Sbjct: 2175 VYRYGQQKPCFVYRLVTDNCLERKIYDRQISKQGMADRVVD 2215 >gi|225684822|gb|EEH23106.1| DNA repair protein RAD5 [Paracoccidioides brasiliensis Pb03] Length = 936 Score = 83.8 bits (206), Expect = 1e-14, Method: Composition-based stats. Identities = 39/207 (18%), Positives = 73/207 (35%), Gaps = 26/207 (12%) Query: 4 YHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVII 63 Y R+ + Q + + + + K Q Y K + + +E Sbjct: 720 YSAITRQGFEKFQAYQLSSRQNPKQAKKFGQ------YEGPHTKTKALISHLLDTIEESK 773 Query: 64 EKANAAPI--IVAYHFNSDLARLQKAFPQGRT-----------LDKDPCTIQEWNEGK-I 109 + API IV + S L +Q A L + + + + + Sbjct: 774 KSPEKAPIKSIVFSSWTSHLDLIQIAMEDNGITSFTRLDGTMSLKQRNAALDAFRDDDNV 833 Query: 110 PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYY 169 +L A + G GLNL G + ++ Q ++R+ + G R V Sbjct: 834 TILLATLGAGGVGLNLTSGSRAYIM-EPQYNPAAIAQAVDRV-----HRLGQTREVTTIQ 887 Query: 170 LIAQNTIDELVLQRLRTKSTIQDLLLN 196 I +++I+E + + R K + D+ LN Sbjct: 888 FIMKDSIEEKIAELARKKQQMADMSLN 914 >gi|321455028|gb|EFX66174.1| hypothetical protein DAPPUDRAFT_332470 [Daphnia pulex] Length = 358 Score = 83.8 bits (206), Expect = 1e-14, Method: Composition-based stats. Identities = 27/98 (27%), Positives = 42/98 (42%), Gaps = 8/98 (8%) Query: 104 WN-EGKIP-LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGF 161 WN IP L + G G+NL N ++ F W+ + I + G Sbjct: 256 WNGSAHIPRLFLISTKAGGVGINL-VAANRVILFDTSWNPSQDVPSI-----FCVYRLGQ 309 Query: 162 KRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 + FVY IAQ TI+E + R TK ++ +++ K Sbjct: 310 TKPCFVYRFIAQGTIEEKIYDRQVTKQSLSCRVIDEHK 347 >gi|313231009|emb|CBY19007.1| unnamed protein product [Oikopleura dioica] Length = 1011 Score = 83.8 bits (206), Expect = 1e-14, Method: Composition-based stats. Identities = 23/142 (16%), Positives = 53/142 (37%), Gaps = 18/142 (12%) Query: 67 NAAPIIVAYHFNSDLARLQKAF---------PQGRTL-DKDPCTIQEWNEGKIP--LLFA 114 N + +++ L + G T D +++ +N Sbjct: 311 NGSRVLIFSQMVMMLDVISDYMALRRYQFQRLDGSTRGDLRQRSMEHFNAPNSTDFAFLL 370 Query: 115 HPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQN 174 + G G+NL + ++ F W+ + Q R + G K+ V +Y ++ Sbjct: 371 STRAGGLGINL-ATADTVIIFDSDWNPQNDLQAQAR-----AHRIGQKKTVKIYRFVSAM 424 Query: 175 TIDELVLQRLRTKSTIQDLLLN 196 +++E V++R + K + L++ Sbjct: 425 SVEEDVIERAKKKMVLDHLVIQ 446 >gi|253748230|gb|EET02490.1| DNA repair and recombination protein Rhp26p [Giardia intestinalis ATCC 50581] Length = 930 Score = 83.8 bits (206), Expect = 1e-14, Method: Composition-based stats. Identities = 34/191 (17%), Positives = 66/191 (34%), Gaps = 28/191 (14%) Query: 27 SKTVKCLQLANGAVYYDEEKHWK---EVHDEKI----KALEVIIEKANAAPIIVAYHFNS 79 +K ++ + + D + K+ + L + +++ I+V Sbjct: 511 AKLIQLQHICDHPSLLDTTGTDAPELQESSCKLTYLMEKLTELWNQSHDK-ILVFCQGRM 569 Query: 80 DLARLQKAFPQGRTL-------------DKDPCTIQEW-NEGKIPLLFAHPASCGHGLNL 125 L+ ++KAF + D P I ++ + I L G GLNL Sbjct: 570 MLSIVEKAFLEHSFFRDSYLRMDGHVPVDARPALISQFSTDPHIRLFLLTTRVGGLGLNL 629 Query: 126 QYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLR 185 N + + W+ Q +ER + + V VY + TI+E + R Sbjct: 630 T-AANHVFLLNPNWNPTIDDQSVERCW-----RITQTKRVTVYKIFTGGTIEEKIFNRQI 683 Query: 186 TKSTIQDLLLN 196 K + +L+ Sbjct: 684 YKRLLVSRVLD 694 >gi|195478527|ref|XP_002086509.1| GE22814 [Drosophila yakuba] gi|194186299|gb|EDW99910.1| GE22814 [Drosophila yakuba] Length = 611 Score = 83.8 bits (206), Expect = 1e-14, Method: Composition-based stats. Identities = 22/105 (20%), Positives = 45/105 (42%), Gaps = 8/105 (7%) Query: 95 DKDPCTIQEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIG 152 + ++++N + + + G GLNLQ + +V F W+ + Q Sbjct: 384 EDRGELLRKFNAKGSDVFVFLLSTRAGGLGLNLQT-ADTVVIFDSDWNPHQDLQA----- 437 Query: 153 VTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 R + G + V V L+ N+++E +L R K + + ++ A Sbjct: 438 QDRAHRIGQRNEVRVLRLMTVNSVEERILAAARYKLNMDEKVIQA 482 >gi|134083903|emb|CAK48807.1| unnamed protein product [Aspergillus niger] Length = 1758 Score = 83.8 bits (206), Expect = 1e-14, Method: Composition-based stats. Identities = 28/158 (17%), Positives = 63/158 (39%), Gaps = 20/158 (12%) Query: 53 DEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQKAFPQG-----------RTLDKDPC 99 + + L II ++ ++V H L ++ + + Sbjct: 1352 SCRAEILNRIIAESVRAGDKVLVFSHSIPTLNYVENDILKAFGWKYCRLDGSTPMASRQA 1411 Query: 100 TIQEWNEGKI-PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQ 158 +++N+G + + G GLN+ +G N ++ F ++ +Q + R + Sbjct: 1412 ATKQFNQGSAEDVYLISTRAGGLGLNI-FGANRVIIFDFTFNPVWEEQAVGR-----AYR 1465 Query: 159 AGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 G K+ VFVY IA T +E++ + K+ + +++ Sbjct: 1466 LGQKKPVFVYRFIAGGTFEEVMYNKAVFKTQLAFRVVD 1503 >gi|118349265|ref|XP_001033509.1| SNF2 family N-terminal domain containing protein [Tetrahymena thermophila] gi|89287858|gb|EAR85846.1| SNF2 family N-terminal domain containing protein [Tetrahymena thermophila SB210] Length = 1285 Score = 83.8 bits (206), Expect = 1e-14, Method: Composition-based stats. Identities = 33/193 (17%), Positives = 78/193 (40%), Gaps = 28/193 (14%) Query: 31 KCLQLANGAVYY----DEEKHWKEVHDEKI---KALEVIIEKAN--AAPIIVAYHFNSDL 81 K Q+ D+E+ +++ +K+ + IIE+ I++ ++ + Sbjct: 855 KLAQMNQSQSQNFNEGDDEEEQQQIDYKKLAKTDRVVDIIEQVQKKGEKILLFTQWHDSI 914 Query: 82 ARLQKAFPQGR----------TLDKDPCTIQEWNE-GKIPLLFAHPASCGHGLNLQYGGN 130 RL+K F T+ + + ++ ++ + GLNL N Sbjct: 915 QRLKKRFEDLDIGYCELHGKMTIKQRAKQVHDFYRLPSKTVMVLSLMAGCVGLNLTCANN 974 Query: 131 ILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQ--NTIDELVLQRLRTKS 188 +++ WW+ Q ++R+ + G K+ V VY + + ++ID + + + K Sbjct: 975 VIIM-DPWWNGAIEDQAVDRV-----YRIGQKKDVNVYRCLIKHDDSIDLRISELCKKKE 1028 Query: 189 TIQDLLLNALKKE 201 + + +L+ + E Sbjct: 1029 ALCNKILSLSQDE 1041 >gi|325183015|emb|CCA17469.1| hypothetical protein SELMODRAFT_162307 [Albugo laibachii Nc14] Length = 1363 Score = 83.8 bits (206), Expect = 1e-14, Method: Composition-based stats. Identities = 26/141 (18%), Positives = 59/141 (41%), Gaps = 18/141 (12%) Query: 68 AAPIIVAYHFNS------DLARLQK---AFPQGRT-LDKDPCTIQEWNEGKIP--LLFAH 115 + +++ D R++K GRT + I+ +NE + Sbjct: 588 GSRVLLFTQMTRVLDIFEDFCRMRKYEYCRIDGRTSYEDRESAIEAYNELDSSKFVFLLS 647 Query: 116 PASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNT 175 + G G+NL Y +I++ + W+ + Q R + G K+ V VY + ++ Sbjct: 648 TRAGGLGINL-YTADIVILYDSDWNPQADLQA-----QDRAHRIGQKKEVNVYRFVTSDS 701 Query: 176 IDELVLQRLRTKSTIQDLLLN 196 ++E +++R + K + +++ Sbjct: 702 VEEKIIERAQQKLKLDAMVVQ 722 >gi|158285422|ref|XP_564675.3| AGAP007573-PA [Anopheles gambiae str. PEST] gi|157019984|gb|EAL41756.3| AGAP007573-PA [Anopheles gambiae str. PEST] Length = 2705 Score = 83.8 bits (206), Expect = 1e-14, Method: Composition-based stats. Identities = 29/169 (17%), Positives = 58/169 (34%), Gaps = 30/169 (17%) Query: 52 HDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQK---------------------AF 88 + K+ I+E++ ++V L +++ Sbjct: 1527 NSPKMDIFFCILEESIRLGDRLLVFSQSLLTLNLIERFLQHNKIPGTENYWAKNISYFRL 1586 Query: 89 PQGRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQM 147 + I E+N + L + G+NL G N +V F W+ Q Sbjct: 1587 DGSTVAQEREKLINEFNSNPNVHLFLVSTRAGSLGINL-VGANRVVVFDASWNPCHDTQA 1645 Query: 148 IERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + R + G K+ FVY L+ N +++ + R K + D +++ Sbjct: 1646 V-----CRVYRYGQKKPCFVYRLVMDNCLEKKIYDRQINKQGMSDRIVD 1689 >gi|74189356|dbj|BAE22708.1| unnamed protein product [Mus musculus] Length = 517 Score = 83.8 bits (206), Expect = 1e-14, Method: Composition-based stats. Identities = 31/160 (19%), Positives = 63/160 (39%), Gaps = 20/160 (12%) Query: 52 HDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAF---------PQGRTLDKDPCT 100 K + L+ I+ +A +++ S + ++ F G T +D Sbjct: 201 ASGKFELLDRILPKLRATNHRVLLFCQMTSLMTIMEDYFAFRNFLYLRLDGTTKSEDRAA 260 Query: 101 I-QEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 + +++NE + + + G GLNLQ + +V F W+ + Q R Sbjct: 261 LLKKFNEPGSQYFIFLLSTRAGGLGLNLQ-AADTVVIFDSDWNPHQDLQA-----QDRAH 314 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + G + V V L N+++E +L + K + ++ A Sbjct: 315 RIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQA 354 >gi|149049422|gb|EDM01876.1| chromodomain helicase DNA binding protein 4, isoform CRA_e [Rattus norvegicus] Length = 940 Score = 83.8 bits (206), Expect = 1e-14, Method: Composition-based stats. Identities = 19/136 (13%), Positives = 46/136 (33%), Gaps = 18/136 (13%) Query: 67 NAAPIIVAYHFNSDLARLQ----------KAFPQGRTLDKDPCTIQEWNEG--KIPLLFA 114 +++ L L+ + G T + I +N + Sbjct: 117 GGHRVLIFSQMTKMLDLLEDFLEHEGYKYERIDGGITGNMRQEAIDRFNAPGAQQFCFLL 176 Query: 115 HPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQN 174 + G G+NL + ++ + W+ Q +R + G + V +Y + + Sbjct: 177 STRAGGLGINL-ATADTVIIYDSDWNPHNDIQA-----FSRAHRIGQNKKVMIYRFVTRA 230 Query: 175 TIDELVLQRLRTKSTI 190 +++E + Q + K + Sbjct: 231 SVEERITQVAKKKMML 246 >gi|320037542|gb|EFW19479.1| DNA repair protein RAD5 [Coccidioides posadasii str. Silveira] Length = 1091 Score = 83.8 bits (206), Expect = 1e-14, Method: Composition-based stats. Identities = 34/188 (18%), Positives = 55/188 (29%), Gaps = 51/188 (27%) Query: 52 HDEKIKALEVIIEKA-NAAPIIVAYHFNSDLARLQK----------AFPQGRTLDKDPCT 100 KI AL + + +V F S L + F Sbjct: 885 TSAKIHALILHLSSLPKNTKAVVFSQFTSFLDLIGAQLTREGIEHLRFDGSMQQKARKAI 944 Query: 101 IQEWN-----------------------------EGKIP-----LLFAHPASCGHGLNLQ 126 + ++N +G I +L + G GLNL Sbjct: 945 LAQFNQMPEAFSEPEEDEDDNPMFLSTRSYKSNSKGNIEQPSPNVLLISLRAGGVGLNLT 1004 Query: 127 YGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRT 186 N + WW Q I+R+ + G + V V + +N+I+E +L+ Sbjct: 1005 -AANHVYMMDPWWSFAVEAQAIDRV-----HRMGQLKDVKVTRFVVKNSIEERMLRVQER 1058 Query: 187 KSTIQDLL 194 K I L Sbjct: 1059 KMMIAGSL 1066 >gi|299740345|ref|XP_001838866.2| hypothetical protein CC1G_09243 [Coprinopsis cinerea okayama7#130] gi|298404200|gb|EAU82981.2| hypothetical protein CC1G_09243 [Coprinopsis cinerea okayama7#130] Length = 671 Score = 83.8 bits (206), Expect = 1e-14, Method: Composition-based stats. Identities = 38/204 (18%), Positives = 73/204 (35%), Gaps = 27/204 (13%) Query: 6 KFQRELYCDLQGENIEAFNSASKTVKCL--QLANGAVYYDEEKHWKEVHDEKIKALEVII 63 K + + D E + QLA +V E + + K+K + +I Sbjct: 446 KRRANVILDSDDEMDTPEEKEVLIGRKTKEQLAKESV----ENMSRFLPSTKMKYMMELI 501 Query: 64 EKAN----AAPIIVAYHFNSDLARLQKAFPQGRT----------LDKDPCTIQEW-NEGK 108 EK+ I+V + + L + + +K ++ + ++ K Sbjct: 502 EKSFKSRPDEKILVVSQWTACLTLVSDYLAEKGIAHVKYQGDMDRNKRDQAVRVFMSKDK 561 Query: 109 IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVY 168 ++ G GLNL N ++ L W Q +R+ + G R V V Sbjct: 562 ARVMLMSLKCGGVGLNLTRANN-VISLDLAWSRAVESQAWDRV-----HRLGQTRNVNVQ 615 Query: 169 YLIAQNTIDELVLQRLRTKSTIQD 192 L+ NT+++ +L K ++ D Sbjct: 616 RLVIANTVEDRILALQERKQSLAD 639 >gi|303314479|ref|XP_003067248.1| SNF2 family N-terminal domain containing protein [Coccidioides posadasii C735 delta SOWgp] gi|240106916|gb|EER25103.1| SNF2 family N-terminal domain containing protein [Coccidioides posadasii C735 delta SOWgp] Length = 1193 Score = 83.8 bits (206), Expect = 1e-14, Method: Composition-based stats. Identities = 34/188 (18%), Positives = 55/188 (29%), Gaps = 51/188 (27%) Query: 52 HDEKIKALEVIIEKA-NAAPIIVAYHFNSDLARLQK----------AFPQGRTLDKDPCT 100 KI AL + + +V F S L + F Sbjct: 987 TSAKIHALILHLSSLPKNTKAVVFSQFTSFLDLIGAQLTREGIEHLRFDGSMQQKARKAI 1046 Query: 101 IQEWN-----------------------------EGKIP-----LLFAHPASCGHGLNLQ 126 + ++N +G I +L + G GLNL Sbjct: 1047 LAQFNQMPEAFSEPEEDEDDNPMFLSTRSYKSNSKGNIEQPSPNVLLISLRAGGVGLNLT 1106 Query: 127 YGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRT 186 N + WW Q I+R+ + G + V V + +N+I+E +L+ Sbjct: 1107 -AANHVYMMDPWWSFAVEAQAIDRV-----HRMGQLKDVKVTRFVVKNSIEERMLRVQER 1160 Query: 187 KSTIQDLL 194 K I L Sbjct: 1161 KMMIAGSL 1168 >gi|156379809|ref|XP_001631648.1| predicted protein [Nematostella vectensis] gi|156218692|gb|EDO39585.1| predicted protein [Nematostella vectensis] Length = 824 Score = 83.8 bits (206), Expect = 1e-14, Method: Composition-based stats. Identities = 26/180 (14%), Positives = 60/180 (33%), Gaps = 22/180 (12%) Query: 23 FNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLA 82 F++A+ K Q +G + +K L+ + E+ +++ L Sbjct: 556 FHAAALEAKRTQ--SGGYEPNSLTEASGKLMLLVKMLKKLREQ--GHRVLIFSQMTRMLD 611 Query: 83 RLQKAFP----QGRTLDK------DPCTIQEWNEGKIPLL--FAHPASCGHGLNLQYGGN 130 L+ + +D I +N + G G+NL + Sbjct: 612 LLEDFLEGHGYKYERIDGSVNGAARQEAIDRFNAPTSQAFCFLLSTRAGGLGINL-ATAD 670 Query: 131 ILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 + + W+ Q +R + G V +Y + +++++E + Q + K + Sbjct: 671 TVFIYDSDWNPHNDIQA-----FSRAHRIGQNNKVMIYRFVTRSSVEERITQVAKKKMML 725 >gi|119174712|ref|XP_001239697.1| hypothetical protein CIMG_09318 [Coccidioides immitis RS] Length = 1183 Score = 83.8 bits (206), Expect = 1e-14, Method: Composition-based stats. Identities = 34/188 (18%), Positives = 55/188 (29%), Gaps = 51/188 (27%) Query: 52 HDEKIKALEVIIEKA-NAAPIIVAYHFNSDLARLQK----------AFPQGRTLDKDPCT 100 KI AL + + +V F S L + F Sbjct: 977 TSAKIHALILHLSSLPKNTKAVVFSQFTSFLDLIGAQLTREGIEHLRFDGSMQQKARKAI 1036 Query: 101 IQEWN-----------------------------EGKIP-----LLFAHPASCGHGLNLQ 126 + ++N +G I +L + G GLNL Sbjct: 1037 LAQFNQMPEAFSEPEEDEDDNPMFLSTRSYKSNSKGNIEQPSPNVLLISLRAGGVGLNLT 1096 Query: 127 YGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRT 186 N + WW Q I+R+ + G + V V + +N+I+E +L+ Sbjct: 1097 -AANHVYMMDPWWSFAVEAQAIDRV-----HRMGQLKDVKVTRFVVKNSIEERMLRVQER 1150 Query: 187 KSTIQDLL 194 K I L Sbjct: 1151 KMMIAGSL 1158 >gi|68490054|ref|XP_711148.1| hypothetical protein CaO19.6291 [Candida albicans SC5314] gi|68490091|ref|XP_711130.1| hypothetical protein CaO19.13670 [Candida albicans SC5314] gi|46432408|gb|EAK91891.1| hypothetical protein CaO19.13670 [Candida albicans SC5314] gi|46432427|gb|EAK91909.1| hypothetical protein CaO19.6291 [Candida albicans SC5314] Length = 972 Score = 83.8 bits (206), Expect = 1e-14, Method: Composition-based stats. Identities = 34/168 (20%), Positives = 67/168 (39%), Gaps = 27/168 (16%) Query: 47 HWKEVHDEKIKA---------LEVIIEKANAAPIIVAYHFNSDLARLQK---------AF 88 WK ++ + + L+ II+ +++ F L L++ A Sbjct: 803 KWKLGDEKFLDSGKVIELGKILQHIID-NKEEKVLIFSLFTQVLDILERVLSIFNYKFAR 861 Query: 89 PQGRTLDKDPCT-IQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 G T ++ I +N + KI + + G G+NL N ++ F ++ E +Q Sbjct: 862 LDGNTPVQERQDLIDLFNQDDKIHIFLISTKAGGVGINL-VAANHVIMFDQSFNPHEDKQ 920 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 +R + G + V VY LI+ TI++ + R K + + + Sbjct: 921 AEDR-----AHRVGQTKEVKVYRLISDETIEKNIFSVARNKLELDEKI 963 >gi|242057381|ref|XP_002457836.1| hypothetical protein SORBIDRAFT_03g014780 [Sorghum bicolor] gi|241929811|gb|EES02956.1| hypothetical protein SORBIDRAFT_03g014780 [Sorghum bicolor] Length = 1070 Score = 83.8 bits (206), Expect = 1e-14, Method: Composition-based stats. Identities = 38/220 (17%), Positives = 79/220 (35%), Gaps = 35/220 (15%) Query: 6 KFQRELYCDLQGENIEAFNSASKTVKCLQLA-----------------NGAVYYDEEKHW 48 + Q++ Y L +++E N+ + + L +A G Y E Sbjct: 432 QMQKQYYRALLQKDLEVINAGGERKRLLNIAMQLRKCCNHPYLFQGAEPGPPYTTGEHLV 491 Query: 49 KEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARL---------QKAFPQGRTLDKDP- 98 + + + K + +++ L L Q G T +D Sbjct: 492 ENAGKMVLLDKLLPKLKERDSRVLIFSQMTRLLDILEDYLMYRGYQYCRIDGNTGGEDRD 551 Query: 99 CTIQEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 +I+ +N + + + G G+NL +++V + W+ + Q R Sbjct: 552 ASIEAFNRPGSEKFVFLLSTRAGGLGINL-ATADVVVLYDSDWNPQADLQA-----QDRA 605 Query: 157 RQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + G K+ V V+ + TI+E V++R K + L++ Sbjct: 606 HRIGQKKEVQVFRFCTEYTIEEKVIERAYKKLALDALVIQ 645 >gi|115436572|ref|NP_001043044.1| Os01g0367900 [Oryza sativa Japonica Group] gi|57012942|sp|Q7G8Y3|ISW2_ORYSJ RecName: Full=Probable chromatin-remodeling complex ATPase chain; AltName: Full=ISW2-like; AltName: Full=Sucrose nonfermenting protein 2 homolog gi|54290802|dbj|BAD61441.1| putative DNA-dependent ATPase SNF2H [Oryza sativa Japonica Group] gi|57900237|dbj|BAD88342.1| putative DNA-dependent ATPase SNF2H [Oryza sativa Japonica Group] gi|58737200|dbj|BAD89475.1| putative DNA-dependent ATPase SNF2H [Oryza sativa Japonica Group] gi|113532575|dbj|BAF04958.1| Os01g0367900 [Oryza sativa Japonica Group] gi|215740512|dbj|BAG97168.1| unnamed protein product [Oryza sativa Japonica Group] gi|222618445|gb|EEE54577.1| hypothetical protein OsJ_01780 [Oryza sativa Japonica Group] Length = 1107 Score = 83.8 bits (206), Expect = 1e-14, Method: Composition-based stats. Identities = 38/220 (17%), Positives = 80/220 (36%), Gaps = 35/220 (15%) Query: 6 KFQRELYCDLQGENIEAFNSASKTVKCLQLA-----------------NGAVYYDEEKHW 48 + Q++ Y L +++E N+ + + L +A G Y E Sbjct: 469 QMQKQYYRALLQKDLEVINAGGERKRLLNIAMQLRKCCNHPYLFQGAEPGPPYTTGEHLV 528 Query: 49 KEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARL---------QKAFPQGRTLDKDP- 98 + + + K + +++ L L Q G T +D Sbjct: 529 ENAGKMVLLDKLLPKLKDRDSRVLIFSQMTRLLDILEDYLMYRGYQYCRIDGNTGGEDRD 588 Query: 99 CTIQEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 +I+ +N+ + + + G G+NL +++V + W+ + Q R Sbjct: 589 ASIEAFNKPGSEKFVFLLSTRAGGLGINL-ATADVVVLYDSDWNPQADLQA-----QDRA 642 Query: 157 RQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + G K+ V V+ + TI+E V++R K + L++ Sbjct: 643 HRIGQKKEVQVFRFCTEYTIEEKVIERAYKKLALDALVIQ 682 >gi|148709693|gb|EDL41639.1| SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, isoform CRA_b [Mus musculus] Length = 1235 Score = 83.4 bits (205), Expect = 1e-14, Method: Composition-based stats. Identities = 31/160 (19%), Positives = 63/160 (39%), Gaps = 20/160 (12%) Query: 52 HDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAF---------PQGRTLDKDPCT 100 K + L+ I+ +A +++ S + ++ F G T +D Sbjct: 727 ASGKFELLDRILPKLRATNHRVLLFCQMTSLMTIMEDYFAFRNFLYLRLDGTTKSEDRAA 786 Query: 101 I-QEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 + +++NE + + + G GLNLQ + +V F W+ + Q R Sbjct: 787 LLKKFNEPGSQYFIFLLSTRAGGLGLNLQ-AADTVVIFDSDWNPHQDLQA-----QDRAH 840 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + G + V V L N+++E +L + K + ++ A Sbjct: 841 RIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQA 880 >gi|115473863|ref|NP_001060530.1| Os07g0660200 [Oryza sativa Japonica Group] gi|113612066|dbj|BAF22444.1| Os07g0660200 [Oryza sativa Japonica Group] Length = 631 Score = 83.4 bits (205), Expect = 1e-14, Method: Composition-based stats. Identities = 24/147 (16%), Positives = 52/147 (35%), Gaps = 18/147 (12%) Query: 69 APIIVAYHFNSDLARLQKAF---------PQGRTL-DKDPCTIQEWNEG--KIPLLFAHP 116 +++ L L + G T D ++ +N Sbjct: 20 HRVLIFSQMVRMLDILAEYLSLRGFQFQRLDGSTRADLRHQAMEHFNAPGSDDFCFLLST 79 Query: 117 ASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTI 176 + G G+NL + ++ F W+ + Q + R + G + V +Y + ++ Sbjct: 80 RAGGLGINL-ATADTVIIFDSDWNPQNDLQAMSR-----AHRIGQQETVNIYRFVTCKSV 133 Query: 177 DELVLQRLRTKSTIQDLLLNALKKETI 203 +E +L+R + K + L++ L E Sbjct: 134 EEDILERAKKKMVLDHLVIQKLNAEGR 160 >gi|322821691|gb|EFZ27947.1| hypothetical protein TCSYLVIO_5838 [Trypanosoma cruzi] Length = 1530 Score = 83.4 bits (205), Expect = 1e-14, Method: Composition-based stats. Identities = 28/146 (19%), Positives = 57/146 (39%), Gaps = 18/146 (12%) Query: 62 IIEKANAAPIIVAYHFNSDLARLQKAFPQGRTL----------DKDPCTIQEWNEG-KIP 110 IIE + +++ + S L L++ + L I+ + E I Sbjct: 557 IIEGLHEK-VVLFSTYRSHLFLLKQLLRKRGLLAEVMHGGLDVKDRQRIIERFTEDTSIS 615 Query: 111 LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYL 170 +L + G G+NL N + F + W+ + Q R+ + G +R V VY + Sbjct: 616 VLLCSTKASGVGINL-VAANHCILFDVSWNPADDTQATYRL-----YRYGQQRPVTVYRI 669 Query: 171 IAQNTIDELVLQRLRTKSTIQDLLLN 196 T + +V +K+ + +++ Sbjct: 670 ATDGTFEHVVFFYALSKTWLHKKIVD 695 >gi|221504382|gb|EEE30057.1| transcription regulatory protein SNF2, putative [Toxoplasma gondii VEG] Length = 1139 Score = 83.4 bits (205), Expect = 1e-14, Method: Composition-based stats. Identities = 31/186 (16%), Positives = 74/186 (39%), Gaps = 23/186 (12%) Query: 29 TVKCLQLANGAVYYDEEKHWKEVHDE---KIKALEVIIEKA--NAAPIIVAYHFNSDLAR 83 ++ ++AN + +E E K + L+ ++ K +++ L Sbjct: 491 LMQLRKIANHPYLFVDEYLVNEDLVRVAGKFECLDRMLPKLLHFKHKVLIFSQMTQVLDL 550 Query: 84 LQKAF-----PQGRT-----LDKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNI 131 + + R L + ++E+N ++ + + G GLNLQ + Sbjct: 551 MAEYMHLRGYKYARLDGSVGLTERKERMEEFNNAEVDTMIFMLSTRAGGLGLNLQ-AADT 609 Query: 132 LVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQ 191 +V F ++ + Q + R + G + V V+ L+ + ++E++L++ K I Sbjct: 610 VVLFDSDFNPHQDLQAM-----CRAHRLGQTKQVKVFRLVTISGVEEIILEKANRKLNID 664 Query: 192 DLLLNA 197 +++ A Sbjct: 665 QMVIQA 670 >gi|198463980|ref|XP_002135618.1| GA28654 [Drosophila pseudoobscura pseudoobscura] gi|198151489|gb|EDY74245.1| GA28654 [Drosophila pseudoobscura pseudoobscura] Length = 1677 Score = 83.4 bits (205), Expect = 1e-14, Method: Composition-based stats. Identities = 23/105 (21%), Positives = 45/105 (42%), Gaps = 8/105 (7%) Query: 95 DKDPCTIQEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIG 152 + ++++N I + + G GLNLQ + +V F W+ + Q Sbjct: 1188 EDRGELLRKFNAKGSDIFVFLLSTRAGGLGLNLQT-ADTVVIFDSDWNPHQDLQA----- 1241 Query: 153 VTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 R + G + V V L+ N+++E +L R K + + ++ A Sbjct: 1242 QDRAHRIGQRNEVRVLRLMTVNSVEERILAAARYKLNMDEKVIQA 1286 >gi|545018|gb|AAC60670.1| homeotic gene regulator [Mus sp.] Length = 1022 Score = 83.4 bits (205), Expect = 1e-14, Method: Composition-based stats. Identities = 30/160 (18%), Positives = 62/160 (38%), Gaps = 20/160 (12%) Query: 52 HDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAF---------PQGRTLDKDPCT 100 K + L+ I+ +A +++ S + ++ F G T +D Sbjct: 486 ASGKFELLDRILPKLRATNHKVLLFCQMTSLMTIMEDYFAYRGFKYLRLDGTTKAEDRGM 545 Query: 101 I-QEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 + + +NE + + + G GLNLQ + ++ F W+ + Q R Sbjct: 546 LLKTFNEPGSEYFIFLLSTRAGGLGLNLQ-SADTVIIFDSDWNPHQDLQA-----QDRAH 599 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + G + V V L N+++E +L + K + ++ A Sbjct: 600 RIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQA 639 >gi|164607171|ref|NP_001101334.2| SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1 [Rattus norvegicus] Length = 1024 Score = 83.4 bits (205), Expect = 2e-14, Method: Composition-based stats. Identities = 30/157 (19%), Positives = 62/157 (39%), Gaps = 19/157 (12%) Query: 51 VHDEKIKALEVIIEKAN--AAPIIVAYHFNSDLARL---------QKAFPQGRT-LDKDP 98 + K + L I+ + +++ F L L + G+T + + Sbjct: 849 LDSGKFRTLGCILSELKQKGDRVVLFSQFTMMLDILEVLLKHHQHRYLRLDGKTQISERI 908 Query: 99 CTIQEWNEG-KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 I E+N I + + G G+NL N+++ + + +Q +R Sbjct: 909 HLIDEFNTDMDIFVFLLSTKAGGLGINLT-SANVVILHDIDCNPYNDKQAEDRC-----H 962 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 + G + V V LI+Q TI+E +L+ + K ++ + Sbjct: 963 RVGQTKEVLVIKLISQGTIEESMLKINQQKLKLEQDM 999 >gi|221120099|ref|XP_002160992.1| PREDICTED: similar to predicted protein, partial [Hydra magnipapillata] Length = 1601 Score = 83.4 bits (205), Expect = 2e-14, Method: Composition-based stats. Identities = 29/169 (17%), Positives = 60/169 (35%), Gaps = 31/169 (18%) Query: 53 DEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQK--------------------AFPQ 90 K+ L I+ A ++V L ++ Sbjct: 1404 SGKLILLCEILADAEVVGDKVLVFSQSLCTLNLIEATLSDIQNDNLCKWCHGVDYFRMDG 1463 Query: 91 GRTLDKDPCTIQEWNEGK---IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQM 147 ++ K + +N+ K L + G+N+ G N ++ F W+ Q Sbjct: 1464 STSVQKRTRWAEIFNDPKNERCRLFLISTRAGSLGINM-VGANRVIIFDCSWNPSHDVQS 1522 Query: 148 IERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + R+ + G ++ V+VY +AQ T++E + +R TK +++ Sbjct: 1523 VFRV-----YRFGQEKPVYVYRFVAQGTMEEKIYERQITKLATAGRVVD 1566 >gi|322711766|gb|EFZ03339.1| SWI/SNF family DNA-dependent ATPase Ris1, putative [Metarhizium anisopliae ARSEF 23] Length = 783 Score = 83.4 bits (205), Expect = 2e-14, Method: Composition-based stats. Identities = 29/164 (17%), Positives = 59/164 (35%), Gaps = 25/164 (15%) Query: 56 IKALEVIIEKANAAPIIVAYHFNSDLARLQ-----KAFPQ----------GRTLDKDPCT 100 +K L I E I+ + L L+ + FP+ G K Sbjct: 616 MKLLREIRE--TGEKTIIFSQWTLLLDLLEVAMWHEQFPEKPIRYDGSMTGEERSKAAKA 673 Query: 101 IQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 ++ + ++ + GLNL + ++ +W+ Q I+R + G Sbjct: 674 FRD--LPECNVMLVSLRAGNAGLNLT-AASRVIIMDPFWNPYIEMQAIDR-----TYRIG 725 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIH 204 + V VY ++ Q T+++ ++ K I + L+ + I Sbjct: 726 QPKEVEVYRILTQETVEDRIVALQNKKKEIVEAALDETESMKIG 769 >gi|301119013|ref|XP_002907234.1| chromatin-remodeling complex ATPase chain, putative [Phytophthora infestans T30-4] gi|262105746|gb|EEY63798.1| chromatin-remodeling complex ATPase chain, putative [Phytophthora infestans T30-4] Length = 1385 Score = 83.4 bits (205), Expect = 2e-14, Method: Composition-based stats. Identities = 24/141 (17%), Positives = 59/141 (41%), Gaps = 18/141 (12%) Query: 68 AAPIIVAYHFNSDLARLQ---------KAFPQGRT-LDKDPCTIQEWNEGKIP--LLFAH 115 + +++ L ++ G+T + +I E+N+ L Sbjct: 598 GSRVLIFTQMTRVLDIMEDFCRMRLYDYCRIDGQTSYEDRESSIDEYNKPNSSKFLFLLS 657 Query: 116 PASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNT 175 + G G+NL Y ++++ + W+ + Q R + G K+ V VY L+ ++ Sbjct: 658 TRAGGLGINL-YTADVVILYDSDWNPQADLQA-----QDRAHRIGQKKEVNVYRLVTTDS 711 Query: 176 IDELVLQRLRTKSTIQDLLLN 196 ++E +++R + K + +++ Sbjct: 712 VEEKIIERAQQKLKLDAMVVQ 732 >gi|313239189|emb|CBY14147.1| unnamed protein product [Oikopleura dioica] Length = 522 Score = 83.4 bits (205), Expect = 2e-14, Method: Composition-based stats. Identities = 26/149 (17%), Positives = 55/149 (36%), Gaps = 17/149 (11%) Query: 53 DEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFP-----------QGRTLDKDPCTI 101 K+ L +++ A I++ + L ++K + +++ Sbjct: 183 SGKLLILAHLLDALIPAKILIFSNSKKILTIIEKLLSGKNIKYDRIDGTIQPKERNNKVH 242 Query: 102 QEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGF 161 + + I + GL L ++ F +W+ + Q ++R + G Sbjct: 243 RFQTDSTIKVCLLTTGVGAVGLTLT-AATRVIVFDPYWNPSKDDQAVDR-----AYRIGQ 296 Query: 162 KRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 K AV V+ LI TI+E + + K +I Sbjct: 297 KNAVVVFRLITCETIEEKIYSKQLFKKSI 325 >gi|255726422|ref|XP_002548137.1| SNF2-family ATP dependent chromatin remodeling factor snf21 [Candida tropicalis MYA-3404] gi|240134061|gb|EER33616.1| SNF2-family ATP dependent chromatin remodeling factor snf21 [Candida tropicalis MYA-3404] Length = 1286 Score = 83.4 bits (205), Expect = 2e-14, Method: Composition-based stats. Identities = 33/161 (20%), Positives = 63/161 (39%), Gaps = 20/161 (12%) Query: 53 DEKIKALEVIIEK--ANAAPIIVAYH------FNSDLAR---LQKAFPQGRTLDKDPCT- 100 K + L+ I+ K + +++ + D R ++ G T +D Sbjct: 810 SGKFELLDRILPKFKKSGHRVLMFFQMTQVMDIMEDFLRWRNMKYLRLDGGTKAEDRQDM 869 Query: 101 IQEWNEGKIPLL--FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQ 158 ++ +N + G GLNLQ + +V F W+ + Q R + Sbjct: 870 LKVFNAPDSEYFCFLLSTRAGGLGLNLQT-ADTVVIFDTDWNPHQDLQA-----QDRAHR 923 Query: 159 AGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 G K V + LI ++++E++L+R K I ++ A K Sbjct: 924 IGQKNEVRILRLITNDSVEEMILERAHQKLDIDGKVIQAGK 964 >gi|124513598|ref|XP_001350155.1| DNA helicase, putative [Plasmodium falciparum 3D7] gi|23615572|emb|CAD52564.1| DNA helicase, putative [Plasmodium falciparum 3D7] Length = 1446 Score = 83.4 bits (205), Expect = 2e-14, Method: Composition-based stats. Identities = 37/185 (20%), Positives = 69/185 (37%), Gaps = 41/185 (22%) Query: 46 KHWKEVHDEKIKALEVII--EKANAAPIIVAYHFNSDLARLQKA----------FPQGRT 93 K V+ K+K L + + N I+V + L ++K + T Sbjct: 1234 KKDNFVYSTKLKKLFEHVQNDMQNELHIVVFSQWIGFLKIIEKLLNLYNIANKIYDGSLT 1293 Query: 94 LDKDPCTIQEWN--EGKI---------------------PLLFAHPASCGHGLNLQYGGN 130 ++ T+ +N +GKI +L + G GLNL + Sbjct: 1294 FEQRKATLNWFNIQKGKIYQPGVGFIKPSYVIPVENFAGKVLLCSLKAGGVGLNLTVS-S 1352 Query: 131 ILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 + LWW+ Q ER+ + G + V +Y + + T++E +LQ ++K Sbjct: 1353 KVYLMDLWWNPAIEDQAFERV-----HRIGQLKEVNIYKFVLEKTVEERILQIHQSKQYT 1407 Query: 191 QDLLL 195 + +L Sbjct: 1408 ANQIL 1412 >gi|270010554|gb|EFA07002.1| hypothetical protein TcasGA2_TC009972 [Tribolium castaneum] Length = 945 Score = 83.4 bits (205), Expect = 2e-14, Method: Composition-based stats. Identities = 39/207 (18%), Positives = 75/207 (36%), Gaps = 35/207 (16%) Query: 17 GENIEAFNSASKTVKCLQLANGA-VY----YDEEKHWKEVHDEK------------IKAL 59 EN N ++ N +Y +E + + V D+K + AL Sbjct: 467 AENQTRANVLISITALRKICNHPDIYLHAAGEEAEDDQNVCDKKFGYYKKSGKMIVVSAL 526 Query: 60 EVIIEKANAAPIIVAYHFNSDLARLQKAFPQ---------GRTLDKDPCT-IQEWNEGK- 108 I +K +++ + + ++ Q G T I ++NE Sbjct: 527 LKIWKK-QKHRVLLFTQSRAMITIFEEFLKQQGYTYLKMDGSTAVSSRQPLINKFNEDSS 585 Query: 109 IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVY 168 + G G+NL G + ++ + W+ Q ER + G ++ V +Y Sbjct: 586 YDVFLLTTKVGGLGVNLT-GADRVIIYDPDWNPATDTQARERAW-----RIGQEKQVTIY 639 Query: 169 YLIAQNTIDELVLQRLRTKSTIQDLLL 195 L++ TI+E + QR K + + +L Sbjct: 640 RLLSAGTIEEKMYQRQVWKQLLSNKVL 666 >gi|47213811|emb|CAF92584.1| unnamed protein product [Tetraodon nigroviridis] Length = 1683 Score = 83.4 bits (205), Expect = 2e-14, Method: Composition-based stats. Identities = 29/160 (18%), Positives = 62/160 (38%), Gaps = 20/160 (12%) Query: 52 HDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAF---------PQGRTLDKDPCT 100 K + L+ I+ +A +++ S + ++ F G T +D Sbjct: 1142 ASGKFEVLDRILPKLRATNHKVLLFCQMTSLMTIMEDYFAYRNFKYLRLDGTTKAEDRGM 1201 Query: 101 I-QEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 + + +N+ + + + G GLNLQ + +V F W+ + Q R Sbjct: 1202 LLKTFNDPESEYFIFLLSTRAGGLGLNLQ-SADTVVIFDSDWNPHQDLQA-----QDRAH 1255 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + G + V V L ++++E +L + K + ++ A Sbjct: 1256 RIGQQNEVRVLRLCTVSSVEEKILAAAKYKLNVDQKVIQA 1295 >gi|11994614|dbj|BAB02751.1| unnamed protein product [Arabidopsis thaliana] Length = 653 Score = 83.4 bits (205), Expect = 2e-14, Method: Composition-based stats. Identities = 21/86 (24%), Positives = 37/86 (43%), Gaps = 6/86 (6%) Query: 105 NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA 164 N+ + + + GLN+ + ++ LWW+ Q I+R + G RA Sbjct: 518 NDYETGAMLMSLKAGNLGLNM-VAASHVILLDLWWNPTTEDQAIDR-----AHRIGQTRA 571 Query: 165 VFVYYLIAQNTIDELVLQRLRTKSTI 190 V V + +NT++E +L K I Sbjct: 572 VTVTRIAIKNTVEERILTLHERKRNI 597 >gi|212535646|ref|XP_002147979.1| SNF2 family helicase/ATPase, putative [Penicillium marneffei ATCC 18224] gi|210070378|gb|EEA24468.1| SNF2 family helicase/ATPase, putative [Penicillium marneffei ATCC 18224] Length = 1784 Score = 83.4 bits (205), Expect = 2e-14, Method: Composition-based stats. Identities = 25/158 (15%), Positives = 57/158 (36%), Gaps = 19/158 (12%) Query: 52 HDEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQKAFP-----------QGRTLDKDP 98 H + + I+E++ I+ L L+ + + Sbjct: 1381 HSYRADIFKKIVEESVRVGDKILCFSQSIPSLNYLETLLRSSGVRFNRLDGKTAVKSRQE 1440 Query: 99 CTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQ 158 N I + + G GLN+ G N ++ F ++ +Q + R + Sbjct: 1441 AVKDFNNRDDIKVYLISTRAGGLGLNIT-GANRVIIFDFSFNPTWEEQAVGR-----AYR 1494 Query: 159 AGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 G K+ V++Y ++ T +E+V + K+ + +++ Sbjct: 1495 LGQKKPVYIYRFLSGGTYEEVVHNKSIFKTQLAMRVVD 1532 >gi|313231904|emb|CBY09016.1| unnamed protein product [Oikopleura dioica] Length = 1677 Score = 83.4 bits (205), Expect = 2e-14, Method: Composition-based stats. Identities = 25/146 (17%), Positives = 49/146 (33%), Gaps = 18/146 (12%) Query: 65 KANAAPIIVAYHFNSDLARLQKAF---------PQGRTLDKDPCT-IQEWNEGKIP--LL 112 KA +++ L L+ GR D I + + + Sbjct: 705 KAGGHKVLIFSQMIRVLDILEDYLYQMSMGFERLDGRIRGNDRQAAIDRFCKPDSDRFVF 764 Query: 113 FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIA 172 + G G+NL + ++ F W+ + Q R + G K+ V +Y L+ Sbjct: 765 LLCTRAGGLGINLT-AADTVIIFDSDWNPQNDLQAQARC-----HRIGQKKEVKIYRLLT 818 Query: 173 QNTIDELVLQRLRTKSTIQDLLLNAL 198 T + + R K + +L ++ Sbjct: 819 SKTYEREMFDRASLKLGLDRAVLQSM 844 >gi|168042770|ref|XP_001773860.1| SNF2 family DNA-dependent ATPase [Physcomitrella patens subsp. patens] gi|162674847|gb|EDQ61350.1| SNF2 family DNA-dependent ATPase [Physcomitrella patens subsp. patens] Length = 1566 Score = 83.4 bits (205), Expect = 2e-14, Method: Composition-based stats. Identities = 31/105 (29%), Positives = 51/105 (48%), Gaps = 8/105 (7%) Query: 95 DKDPCTIQEWNE--GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIG 152 D+ I+ +N+ GKI +L A +CG G+ L G + +VF + W+ +Q I R Sbjct: 1360 DERQSIIERFNDRKGKIRVLLASTKACGEGITLT-GASRVVFMDVLWNPAVIRQAIHR-- 1416 Query: 153 VTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + G + AV VY L+A T++E QR+ +K + Sbjct: 1417 ---AFRIGQRNAVHVYRLVASGTMEESKYQRMVSKDWKSQSIFRG 1458 >gi|330906609|ref|XP_003295534.1| hypothetical protein PTT_01525 [Pyrenophora teres f. teres 0-1] gi|311333094|gb|EFQ96362.1| hypothetical protein PTT_01525 [Pyrenophora teres f. teres 0-1] Length = 1027 Score = 83.4 bits (205), Expect = 2e-14, Method: Composition-based stats. Identities = 21/155 (13%), Positives = 57/155 (36%), Gaps = 21/155 (13%) Query: 51 VHDEKIKALEVIIEK--ANA--APIIVAYHFNSDLARLQ----------KAFPQGRTLDK 96 + KI ++ + AN ++ F S L ++ + + +D Sbjct: 851 IPSAKINRTIELLNEIRANDPTEKTLIFSQFTSLLDLVEVPLWREGIKYQRYDGSMKMDD 910 Query: 97 DPCTIQEW-NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTR 155 + + + ++ + GLNL +++ +W+ +Q ++R Sbjct: 911 RAEAVNLFMDNPNQNVMLVSIKAGNAGLNLWKASQVIIL-DPFWNPFIEEQAVDR----- 964 Query: 156 QRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 + R V+V+ ++ +T+++ ++ K I Sbjct: 965 AHRMPQTREVYVHRILVPDTVEDRIVMLQDKKREI 999 >gi|238880670|gb|EEQ44308.1| SNF2-family ATP dependent chromatin remodeling factor snf21 [Candida albicans WO-1] Length = 1302 Score = 83.4 bits (205), Expect = 2e-14, Method: Composition-based stats. Identities = 25/144 (17%), Positives = 54/144 (37%), Gaps = 18/144 (12%) Query: 68 AAPIIVAYHFNSDLARL---------QKAFPQGRTLDKDPCT-IQEWNEGKIPLL--FAH 115 +++ + + + + G T ++ ++ +N Sbjct: 836 GHRVLMFFQMTQIMDIMEDFLRWKDMKYLRLDGSTKAEERQDMLKVFNAPDSDYFCFLLS 895 Query: 116 PASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNT 175 + G GLNLQ + ++ F W+ + Q R + G K V + LI ++ Sbjct: 896 TRAGGLGLNLQT-ADTVIIFDTDWNPHQDLQA-----QDRAHRIGQKNEVRILRLITNDS 949 Query: 176 IDELVLQRLRTKSTIQDLLLNALK 199 ++E++L+R K I ++ A K Sbjct: 950 VEEVILERAHQKLDIDGKVIQAGK 973 >gi|50292251|ref|XP_448558.1| hypothetical protein [Candida glabrata CBS 138] gi|49527870|emb|CAG61521.1| unnamed protein product [Candida glabrata] Length = 830 Score = 83.4 bits (205), Expect = 2e-14, Method: Composition-based stats. Identities = 31/169 (18%), Positives = 62/169 (36%), Gaps = 23/169 (13%) Query: 43 DEEKHWKEVHDEKIKALEV----IIEKANAAPIIVAYHFNSDLA----RLQKAFPQGRTL 94 + + W+ KI+AL + IV F S L RL++A Q L Sbjct: 650 NMKGTWR--SSTKIEALVEELYKLRSPVKTVKSIVFSQFTSMLDLVEWRLKRAGFQTVKL 707 Query: 95 D------KDPCTIQEWNEG-KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQM 147 + TI+ + + + + + G LNL + + WW+ Q Sbjct: 708 QGSMSPTQRDQTIKYFMDNIECEVFLVSLKAGGVALNLCEASQVFIL-DPWWNPSVEWQS 766 Query: 148 IERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 +R+ + G R V + +++I+ +++ K+ + +N Sbjct: 767 GDRV-----HRIGQYRPVKITRFCIEDSIEARIIELQEKKANMIHATIN 810 >gi|154279660|ref|XP_001540643.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1] gi|150412586|gb|EDN07973.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1] Length = 990 Score = 83.4 bits (205), Expect = 2e-14, Method: Composition-based stats. Identities = 28/138 (20%), Positives = 47/138 (34%), Gaps = 17/138 (12%) Query: 66 ANAAPIIVAYHFNSDLARLQKAFP----------QGRTLDKDPCTIQEWNEG-KIPLLFA 114 N ++V H L LQ F + + + +N + + Sbjct: 611 GNGDKVLVFSHSVRLLKMLQMLFKHTSYNVSYLDGAMSYEDRAKVVDNFNADVREFVFLI 670 Query: 115 HPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQN 174 + G GLN+ N +V W+ Q R + G R V V+ L++ Sbjct: 671 STRAGGVGLNIT-SANKVVVVDPNWNPAYDLQA-----QDRAYRIGQARDVEVFRLVSAG 724 Query: 175 TIDELVLQRLRTKSTIQD 192 TI+E+V R K + Sbjct: 725 TIEEIVYARQIYKQQQAN 742 >gi|4056412|gb|AAC97986.1| BRG-1-HUMAN [AA 812-1440] [Homo sapiens] Length = 628 Score = 83.4 bits (205), Expect = 2e-14, Method: Composition-based stats. Identities = 30/160 (18%), Positives = 62/160 (38%), Gaps = 20/160 (12%) Query: 52 HDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAF---------PQGRTLDKDPCT 100 K + L+ I+ +A +++ S + ++ F G T +D Sbjct: 265 ASGKFELLDRILPKLRATNHKVLLFCQMTSLMTIMEDYFAYRGFKYLRLDGTTKAEDRGM 324 Query: 101 I-QEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 + + +NE + + + G GLNLQ + ++ F W+ + Q R Sbjct: 325 LLKTFNEPGSEYFIFLLSTRAGGLGLNLQ-SADTVIIFDSDWNPHQDLQA-----QDRAH 378 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + G + V V L N+++E +L + K + ++ A Sbjct: 379 RIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQA 418 >gi|157103789|ref|XP_001648131.1| helicase [Aedes aegypti] gi|108880486|gb|EAT44711.1| helicase [Aedes aegypti] Length = 707 Score = 83.4 bits (205), Expect = 2e-14, Method: Composition-based stats. Identities = 24/161 (14%), Positives = 56/161 (34%), Gaps = 20/161 (12%) Query: 49 KEVHDEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQKAFP----------QGRTLDK 96 ++ L+ ++++ + + +++ L L+ ++ Sbjct: 441 IVDVSSRMIVLDKLLDELHKRGSRVLLFSQMVIMLNVLEDYMEWKGYKYHRMTGTTQQEE 500 Query: 97 DPCTIQEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 I E+N + + G G+NLQ + ++F+ L W+ + Q +R Sbjct: 501 RQAMIDEFNSPGSDTFIFMITTRTGGIGINLQT-ADTVIFYDLDWNPQADFQAEDR---- 555 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 + G + V V T+DE V K + ++ Sbjct: 556 -AHRIGQTKQVHVIRFTVVGTVDEYVHVCSNRKQALDKAIV 595 >gi|85690939|ref|XP_965869.1| helicase DNA-binding protein [Encephalitozoon cuniculi GB-M1] gi|19068436|emb|CAD24904.1| similarity to CHROMODOMAIN HELICASE DNA-BINDING PROTEIN 2 [Encephalitozoon cuniculi GB-M1] Length = 1251 Score = 83.4 bits (205), Expect = 2e-14, Method: Composition-based stats. Identities = 21/142 (14%), Positives = 47/142 (33%), Gaps = 18/142 (12%) Query: 69 APIIVAYHFNSDLARLQK----------AFPQGRTLDKDPCTIQEWNEG--KIPLLFAHP 116 +++ L L + G + I +++ + + Sbjct: 665 HKVLIFSQMTRCLDLLAEYLAYRKYKYERIDGGARTENRQAAIDRFSDKTSDVFVFLLST 724 Query: 117 ASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTI 176 + G G+NL + ++ F W+ + Q R + G V VY L+ +NT Sbjct: 725 RAGGVGINLT-AADTVIIFDSDWNPQNDLQAQARC-----HRIGQTSEVKVYRLVTENTY 778 Query: 177 DELVLQRLRTKSTIQDLLLNAL 198 + + + K + +L + Sbjct: 779 EREMFDKAGLKLGLDRAVLQKM 800 >gi|68471523|ref|XP_720068.1| hypothetical protein CaO19.7869 [Candida albicans SC5314] gi|68471790|ref|XP_719938.1| hypothetical protein CaO19.239 [Candida albicans SC5314] gi|46441784|gb|EAL01078.1| hypothetical protein CaO19.239 [Candida albicans SC5314] gi|46441919|gb|EAL01212.1| hypothetical protein CaO19.7869 [Candida albicans SC5314] Length = 1303 Score = 83.4 bits (205), Expect = 2e-14, Method: Composition-based stats. Identities = 25/144 (17%), Positives = 54/144 (37%), Gaps = 18/144 (12%) Query: 68 AAPIIVAYHFNSDLARL---------QKAFPQGRTLDKDPCT-IQEWNEGKIPLL--FAH 115 +++ + + + + G T ++ ++ +N Sbjct: 836 GHRVLMFFQMTQIMDIMEDFLRWKDMKYLRLDGSTKAEERQDMLKVFNAPDSDYFCFLLS 895 Query: 116 PASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNT 175 + G GLNLQ + ++ F W+ + Q R + G K V + LI ++ Sbjct: 896 TRAGGLGLNLQT-ADTVIIFDTDWNPHQDLQA-----QDRAHRIGQKNEVRILRLITNDS 949 Query: 176 IDELVLQRLRTKSTIQDLLLNALK 199 ++E++L+R K I ++ A K Sbjct: 950 VEEVILERAHQKLDIDGKVIQAGK 973 >gi|326918512|ref|XP_003205532.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1-like [Meleagris gallopavo] Length = 927 Score = 83.4 bits (205), Expect = 2e-14, Method: Composition-based stats. Identities = 31/162 (19%), Positives = 63/162 (38%), Gaps = 19/162 (11%) Query: 49 KEVHDEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQKAFP---------QGRT-LDK 96 + + K + LE ++ +++ F L L+ G+T + Sbjct: 750 QILDSGKFRVLERLLSDLKEKGDRVVLFSQFTMVLDILEVFLKHWQHRYIRLDGKTQISD 809 Query: 97 DPCTIQEWNEG-KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTR 155 I E+N I + + G G+NL N+++ + + +Q +R Sbjct: 810 RIHLIDEFNTDMGIFVFLLSTKAGGLGINLT-SANVVILHDIDCNPYNDKQAEDRC---- 864 Query: 156 QRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + G R V V LI++ TI+E +L+ + K ++ + A Sbjct: 865 -HRVGQTREVKVIKLISKGTIEESMLKMNQQKLKLEQDMTAA 905 >gi|253744203|gb|EET00442.1| DNA-dependent ATPase, putative [Giardia intestinalis ATCC 50581] Length = 1272 Score = 83.4 bits (205), Expect = 2e-14, Method: Composition-based stats. Identities = 31/167 (18%), Positives = 63/167 (37%), Gaps = 21/167 (12%) Query: 44 EEKHWKEVHDE--KIKALEVIIEKANAAPIIVAYHFNSDLARLQK----------AFPQG 91 E H V + + L I+ N ++V S L ++ Sbjct: 484 EGDHIVNVSGKMVVLDKLITRIKAINEK-VLVFCQMTSMLNIIEDYLRYREHLYCRIDGS 542 Query: 92 RTLDKDPCTIQEWNEGKIPLL--FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIE 149 L+ ++ +N P+ + GLNL N ++ + ++ + Q + Sbjct: 543 TDLETRAKYMKMFNMPTSPVFVFLLSTRAGCLGLNLT-AANHVIIYQQDFNPQADLQAVA 601 Query: 150 RIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 R + + VFVY L+A+NT+D + +R + K + +L++ Sbjct: 602 R-----AYRLLQTKEVFVYRLLAENTVDTRIYERAQLKLGLDNLIIQ 643 >gi|193084005|gb|ACF09679.1| helicase SNF2/RAD54 family [uncultured marine crenarchaeote AD1000-202-A2] Length = 569 Score = 83.4 bits (205), Expect = 2e-14, Method: Composition-based stats. Identities = 38/150 (25%), Positives = 64/150 (42%), Gaps = 12/150 (8%) Query: 56 IKALEVIIEKANAAPIIVAYHFNSDL--ARLQKAFP----QGRTLDKDPCTIQEWNEGKI 109 I+ ++ I+E + + + L LQ+ P G+T I + +G Sbjct: 403 IEFVKNIMEIEESVVVFCHHKAIHRLLHESLQEFHPSSIIGGQTDKVRQLNIDRFQDGDT 462 Query: 110 PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYY 169 L+ A + G+NL ++F L W H+Q +R+ + G K VF YY Sbjct: 463 KLMIAGLRAGNLGINLTR-AKYVIFGELDWSPAIHRQAEDRL-----HRIGQKNTVFAYY 516 Query: 170 LIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 LI T+DE V L KS D +++ ++ Sbjct: 517 LIGNGTLDEHVANILVDKSYEIDTIMDEVR 546 >gi|170590139|ref|XP_001899830.1| Associated with TFs and helicases family protein [Brugia malayi] gi|158592749|gb|EDP31346.1| Associated with TFs and helicases family protein [Brugia malayi] Length = 2707 Score = 83.4 bits (205), Expect = 2e-14, Method: Composition-based stats. Identities = 30/199 (15%), Positives = 69/199 (34%), Gaps = 27/199 (13%) Query: 8 QRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYD-------EEKHWKEVHDEKIKALE 60 + ++ +++ + + +Q + V + H + + ++ L Sbjct: 1347 EEQILAEVKAGHPDWSEDDIYQHALVQSSGKLVLIAKLLPKLRTDGHKVLIFSQMVRVL- 1405 Query: 61 VIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIP--LLFAHPAS 118 IIE+ +VA ++ R+ D I +++ + + Sbjct: 1406 DIIEE-----FLVAQNYT--FERIDGNVRG----DLRQSAIDRFSKKDSDRFIFLLCTRA 1454 Query: 119 CGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDE 178 G G+NL + ++ F W+ + Q R + G + V VY LI NT + Sbjct: 1455 GGLGINLT-AADTVIIFDSDWNPQNDLQAQARC-----HRIGQTKMVKVYRLITCNTYER 1508 Query: 179 LVLQRLRTKSTIQDLLLNA 197 + + K + +L + Sbjct: 1509 EMFDKASLKLGLDRAVLQS 1527 >gi|221120608|ref|XP_002153791.1| PREDICTED: similar to chromodomain helicase DNA binding protein 4 [Hydra magnipapillata] Length = 1665 Score = 83.4 bits (205), Expect = 2e-14, Method: Composition-based stats. Identities = 21/136 (15%), Positives = 46/136 (33%), Gaps = 18/136 (13%) Query: 67 NAAPIIVAYHFNSDLARLQKAFP----QGRTLDKD------PCTIQEWN--EGKIPLLFA 114 +++ L L+ + LD I +N +I Sbjct: 830 QGHRVLIFSQMTRVLDLLEDFMEGHGWRYERLDGTITGGIRQSAIDRFNLPNSEIFSFLL 889 Query: 115 HPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQN 174 + G G+NL + + + W+ Q +R + G + V +Y + ++ Sbjct: 890 STRAGGLGINL-ATADTVFIYDSDWNPHNDIQA-----FSRAHRIGQQNKVMIYRFVTKS 943 Query: 175 TIDELVLQRLRTKSTI 190 T++E + Q + K + Sbjct: 944 TVEERITQVAKKKMML 959 >gi|149062633|gb|EDM13056.1| rCG47910, isoform CRA_a [Rattus norvegicus] Length = 1239 Score = 83.4 bits (205), Expect = 2e-14, Method: Composition-based stats. Identities = 31/160 (19%), Positives = 63/160 (39%), Gaps = 20/160 (12%) Query: 52 HDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAF---------PQGRTLDKDPCT 100 K + L+ I+ +A +++ S + ++ F G T +D Sbjct: 731 ASGKFELLDRILPKLRATNHRVLLFCQMTSLMTIMEDYFAFRNFLYLRLDGTTKSEDRAA 790 Query: 101 I-QEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 + +++NE + + + G GLNLQ + +V F W+ + Q R Sbjct: 791 LLKKFNEPGSQYFIFLLSTRAGGLGLNLQ-AADTVVIFDSDWNPHQDLQA-----QDRAH 844 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + G + V V L N+++E +L + K + ++ A Sbjct: 845 RIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQA 884 >gi|302774573|ref|XP_002970703.1| hypothetical protein SELMODRAFT_411494 [Selaginella moellendorffii] gi|300161414|gb|EFJ28029.1| hypothetical protein SELMODRAFT_411494 [Selaginella moellendorffii] Length = 1538 Score = 83.4 bits (205), Expect = 2e-14, Method: Composition-based stats. Identities = 22/148 (14%), Positives = 51/148 (34%), Gaps = 18/148 (12%) Query: 68 AAPIIVAYHFNSDLARLQKAF---------PQGRTLDK-DPCTIQEWNEG--KIPLLFAH 115 +++ L L G T ++ +N + Sbjct: 780 GHRVLIFSQMVKMLDILADYLRLRGFQFQRLDGSTKHHLRQQAMEHFNAPGSEDFCFLLS 839 Query: 116 PASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNT 175 + G G+NL + ++ F W+ + Q + R + G + V +Y + + Sbjct: 840 TRAGGLGINL-ATADTVIIFDSDWNPQNDLQAMSR-----AHRIGQEFVVNIYRFVTCRS 893 Query: 176 IDELVLQRLRTKSTIQDLLLNALKKETI 203 ++E +L+R + K + L++ L + Sbjct: 894 VEEDILERAKKKMVLDHLVIQKLNAQGR 921 >gi|149049419|gb|EDM01873.1| chromodomain helicase DNA binding protein 4, isoform CRA_c [Rattus norvegicus] Length = 977 Score = 83.4 bits (205), Expect = 2e-14, Method: Composition-based stats. Identities = 19/136 (13%), Positives = 46/136 (33%), Gaps = 18/136 (13%) Query: 67 NAAPIIVAYHFNSDLARLQ----------KAFPQGRTLDKDPCTIQEWNEG--KIPLLFA 114 +++ L L+ + G T + I +N + Sbjct: 117 GGHRVLIFSQMTKMLDLLEDFLEHEGYKYERIDGGITGNMRQEAIDRFNAPGAQQFCFLL 176 Query: 115 HPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQN 174 + G G+NL + ++ + W+ Q +R + G + V +Y + + Sbjct: 177 STRAGGLGINL-ATADTVIIYDSDWNPHNDIQA-----FSRAHRIGQNKKVMIYRFVTRA 230 Query: 175 TIDELVLQRLRTKSTI 190 +++E + Q + K + Sbjct: 231 SVEERITQVAKKKMML 246 >gi|299747149|ref|XP_001841249.2| DNA repair protein rad16 [Coprinopsis cinerea okayama7#130] gi|298407389|gb|EAU80544.2| DNA repair protein rad16 [Coprinopsis cinerea okayama7#130] Length = 976 Score = 83.4 bits (205), Expect = 2e-14, Method: Composition-based stats. Identities = 31/177 (17%), Positives = 60/177 (33%), Gaps = 38/177 (21%) Query: 52 HDEKIKALEV----IIEKANAAPIIVAYHFNSDLARLQKAFPQGRTL----------DKD 97 KI+AL + +K IV F + L + + + Sbjct: 801 SSSKIEALVEELSNLRQKDATTKSIVFSQFVNFLDLIAYRLQRAGFVVCRLEGTMSPQAR 860 Query: 98 PCTIQEW------------------NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWW 139 TI+ + N ++ + + G LNL + + WW Sbjct: 861 DATIKHFSKLHSGFWSAIAKTSNQVNNVEVTVFLVSLKAGGVALNLTE-ASRVYLMDSWW 919 Query: 140 DLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + Q ++RI + G +R V L+ +++I+ ++Q KS + D L+ Sbjct: 920 NPAVEFQAMDRI-----HRLGQRRPVEAIKLVVEDSIESRIVQLQEKKSAMIDATLS 971 >gi|194382486|dbj|BAG64413.1| unnamed protein product [Homo sapiens] Length = 834 Score = 83.4 bits (205), Expect = 2e-14, Method: Composition-based stats. Identities = 30/160 (18%), Positives = 62/160 (38%), Gaps = 20/160 (12%) Query: 52 HDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAF---------PQGRTLDKDPCT 100 K + L+ I+ +A +++ S + ++ F G T +D Sbjct: 298 ASGKFELLDRILPKLRATNHKVLLFCQMTSLMTIMEDYFAYRGFKYLRLDGTTKAEDRGM 357 Query: 101 I-QEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 + + +NE + + + G GLNLQ + ++ F W+ + Q R Sbjct: 358 LLKTFNEPGSEYFIFLLSTRAGGLGLNLQ-SADTVIIFDSDWNPHQDLQA-----QDRAH 411 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + G + V V L N+++E +L + K + ++ A Sbjct: 412 RIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQA 451 >gi|315050848|ref|XP_003174798.1| transcription termination factor 2 [Arthroderma gypseum CBS 118893] gi|311340113|gb|EFQ99315.1| transcription termination factor 2 [Arthroderma gypseum CBS 118893] Length = 1164 Score = 83.4 bits (205), Expect = 2e-14, Method: Composition-based stats. Identities = 31/170 (18%), Positives = 66/170 (38%), Gaps = 20/170 (11%) Query: 41 YYDEEKHWKEVHDEKIKALEVIIEKANAAPI--IVAYHFNSDLARLQKAFPQGRT----- 93 Y K + + E + + PI ++ + S L ++ A + + Sbjct: 980 YEGPHTKTKALISRLLDTAEDNKKSSCQPPIKSVIFSAWTSHLDLIEVALEENKLTGFTR 1039 Query: 94 ------LDKDPCTIQEWNEGK-IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 L + +I+ ++ + +L + G GLNL G+I+ ++ Q Sbjct: 1040 LDGTMSLKQRNASIETFSTDDSVTILLVTIGAGGVGLNLT-AGSIVYIMEPQYNPAAIAQ 1098 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 ++R+ + G KR V I ++I+E + + + K + D+ LN Sbjct: 1099 AVDRV-----HRIGQKREVTTIQFIMNDSIEEKITELAKRKQKLADMSLN 1143 >gi|255551667|ref|XP_002516879.1| helicase, putative [Ricinus communis] gi|223543967|gb|EEF45493.1| helicase, putative [Ricinus communis] Length = 1064 Score = 83.4 bits (205), Expect = 2e-14, Method: Composition-based stats. Identities = 35/220 (15%), Positives = 79/220 (35%), Gaps = 35/220 (15%) Query: 6 KFQRELYCDLQGENIEAFNSASKTVKCLQLA-----------------NGAVYYDEEKHW 48 + Q++ Y L +++E N+ + + L +A G Y + Sbjct: 427 QMQKQYYRALLQKDLEVVNAGGERKRLLNIAMQLRKCCNHPYLFQGAEPGPPYTTGDHLI 486 Query: 49 KEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQ---------KAFPQGRTLDKDP- 98 + + K + +++ L L+ G T +D Sbjct: 487 TNAGKMVLLDKLLPKLKERDSRVLIFSQMTRLLDILEDYLMFRGYLYCRIDGNTGGEDRD 546 Query: 99 CTIQEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 +I+ +N+ + + + G G+NL ++++ + W+ + Q R Sbjct: 547 ASIEAFNKPGSEKFVFLLSTRAGGLGINL-ATADVVILYDSDWNPQVDLQA-----QDRA 600 Query: 157 RQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + G K+ V V+ + TI+E V++R K + L++ Sbjct: 601 HRIGQKKEVQVFRFCTEYTIEEKVIERAYKKLALDALVIQ 640 >gi|60544832|gb|AAX22754.1| SWI2/SNF2-like protein [Arabidopsis thaliana] Length = 705 Score = 83.4 bits (205), Expect = 2e-14, Method: Composition-based stats. Identities = 26/158 (16%), Positives = 55/158 (34%), Gaps = 38/158 (24%) Query: 71 IIVAYHFNSDLARLQKAFPQ----------GRTLDKDPCTIQEWNEGK--IPLLFAHPAS 118 +++ + L + F + LD+ I+++++ K + + Sbjct: 518 VLIFSQWTKLLDIMDYYFSEKGFEVCRIDGSVKLDERRRQIKDFSDEKSSCSIFLLSTRA 577 Query: 119 CGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQ----- 173 G G+NL + + + W+ + Q ++R + G + V VY L Sbjct: 578 GGLGINLT-AADTCILYDSDWNPQMDLQAMDRC-----HRIGQTKPVHVYRLSTAQSIEI 631 Query: 174 ---------------NTIDELVLQRLRTKSTIQDLLLN 196 NT +E +L L+ T +D L+ Sbjct: 632 HLLSTKSPIDSLNQINTQEEDILALLKEDETAEDKLIQ 669 >gi|229824154|ref|ZP_04450223.1| hypothetical protein GCWU000282_01458 [Catonella morbi ATCC 51271] gi|229786508|gb|EEP22622.1| hypothetical protein GCWU000282_01458 [Catonella morbi ATCC 51271] Length = 398 Score = 83.4 bits (205), Expect = 2e-14, Method: Composition-based stats. Identities = 37/205 (18%), Positives = 73/205 (35%), Gaps = 32/205 (15%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEV 61 K+Y ++ + N AN ++K+ +E+ Sbjct: 216 KEYKTLRKTRVL----NDEAFDNIPKLIHGLRYWAN--------------QEDKLSYIEM 257 Query: 62 IIEKANAAPIIVAYHFNSDLARL----QKAFPQGRTLDKDPCTI---QEWNEGKIPLLFA 114 +++ N +I+ Y + + RL K Q ++ + W K + Sbjct: 258 LLQGTN-RNVIIFYQYKEEYERLHEIALKLGKQIYVVNGKASHLPPRDIWQSLKSSVTLV 316 Query: 115 HPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQN 174 S G+ LQY + +VF++ + ++++Q + R + G + V VY Q+ Sbjct: 317 QYQSGSSGIELQY-ASEVVFYTPTYSYQDYEQSLGR-----AYRNGQTKKVTVYQFETQH 370 Query: 175 TIDELVLQRLRTKSTIQDLLLNALK 199 TI+ V + L K L K Sbjct: 371 TIESEVWEALANKKDFSTQLYAMTK 395 >gi|195157502|ref|XP_002019635.1| GL12501 [Drosophila persimilis] gi|194116226|gb|EDW38269.1| GL12501 [Drosophila persimilis] Length = 1502 Score = 83.4 bits (205), Expect = 2e-14, Method: Composition-based stats. Identities = 26/134 (19%), Positives = 52/134 (38%), Gaps = 18/134 (13%) Query: 75 YHFNSDLARLQKAFPQGRTL---------DKDPCTIQEWNEG---KIPLLFAHPASCGHG 122 Y F D+ + + G+ ++ + +N + L + G G Sbjct: 1123 YEFEGDVGEFKGCWTNGKDYFRLDGSCSVEQREAMCKTFNNVANLRARLFLISTRAGGLG 1182 Query: 123 LNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQ 182 +NL N +V F + W+ Q I R+ + G + ++Y LIA T+++ V + Sbjct: 1183 INL-VAANRVVIFDVSWNPSHDTQSIFRV-----YRFGQVKPCYIYRLIAMGTMEQKVYE 1236 Query: 183 RLRTKSTIQDLLLN 196 R K +++ Sbjct: 1237 RQVAKQATAKRVID 1250 >gi|302771908|ref|XP_002969372.1| hypothetical protein SELMODRAFT_440815 [Selaginella moellendorffii] gi|300162848|gb|EFJ29460.1| hypothetical protein SELMODRAFT_440815 [Selaginella moellendorffii] Length = 1544 Score = 83.4 bits (205), Expect = 2e-14, Method: Composition-based stats. Identities = 22/148 (14%), Positives = 51/148 (34%), Gaps = 18/148 (12%) Query: 68 AAPIIVAYHFNSDLARLQKAF---------PQGRTLDK-DPCTIQEWNEG--KIPLLFAH 115 +++ L L G T ++ +N + Sbjct: 780 GHRVLIFSQMVKMLDILADYLRLRGFQFQRLDGSTKHHLRQQAMEHFNAPGSEDFCFLLS 839 Query: 116 PASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNT 175 + G G+NL + ++ F W+ + Q + R + G + V +Y + + Sbjct: 840 TRAGGLGINL-ATADTVIIFDSDWNPQNDLQAMSR-----AHRIGQEFVVNIYRFVTCRS 893 Query: 176 IDELVLQRLRTKSTIQDLLLNALKKETI 203 ++E +L+R + K + L++ L + Sbjct: 894 VEEDILERAKKKMVLDHLVIQKLNAQGR 921 >gi|74151005|dbj|BAE27633.1| unnamed protein product [Mus musculus] Length = 806 Score = 83.4 bits (205), Expect = 2e-14, Method: Composition-based stats. Identities = 30/160 (18%), Positives = 62/160 (38%), Gaps = 20/160 (12%) Query: 52 HDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAF---------PQGRTLDKDPCT 100 K + L+ I+ +A +++ S + ++ F G T +D Sbjct: 270 ASGKFELLDRILPKLRATNHKVLLFCQMTSLMTIMEDYFAYRGFKYLRLDGTTKAEDRGM 329 Query: 101 I-QEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 + + +NE + + + G GLNLQ + ++ F W+ + Q R Sbjct: 330 LLKTFNEPGSEYFIFLLSTRAGGLGLNLQ-SADTVIIFDSDWNPHQDLQA-----QDRAH 383 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + G + V V L N+++E +L + K + ++ A Sbjct: 384 RIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQA 423 >gi|198455069|ref|XP_001359844.2| GA18248 [Drosophila pseudoobscura pseudoobscura] gi|198133079|gb|EAL28996.2| GA18248 [Drosophila pseudoobscura pseudoobscura] Length = 1506 Score = 83.4 bits (205), Expect = 2e-14, Method: Composition-based stats. Identities = 26/134 (19%), Positives = 52/134 (38%), Gaps = 18/134 (13%) Query: 75 YHFNSDLARLQKAFPQGRTL---------DKDPCTIQEWNEG---KIPLLFAHPASCGHG 122 Y F D+ + + G+ ++ + +N + L + G G Sbjct: 1127 YEFEGDVGEFKGCWTNGKDYFRLDGSCSVEQREAMCKTFNNVANLRARLFLISTRAGGLG 1186 Query: 123 LNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQ 182 +NL N +V F + W+ Q I R+ + G + ++Y LIA T+++ V + Sbjct: 1187 INL-VAANRVVIFDVSWNPSHDTQSIFRV-----YRFGQVKPCYIYRLIAMGTMEQKVYE 1240 Query: 183 RLRTKSTIQDLLLN 196 R K +++ Sbjct: 1241 RQVAKQATAKRVID 1254 >gi|157126405|ref|XP_001654622.1| transcriptional regulator ATRX (X-linked helicase II) [Aedes aegypti] gi|108873308|gb|EAT37533.1| transcriptional regulator ATRX (X-linked helicase II) [Aedes aegypti] Length = 1374 Score = 83.4 bits (205), Expect = 2e-14, Method: Composition-based stats. Identities = 27/114 (23%), Positives = 48/114 (42%), Gaps = 9/114 (7%) Query: 86 KAFPQGRTLDKDPCTIQEWNEGK---IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLE 142 G + I ++N+ K + + G G+NL G N +V W+ Sbjct: 917 YRLDGGTSKSTRHEMINKFNDPKNRVTRVFLISTKAGGQGINL-VGANRVVILDTSWNPA 975 Query: 143 EHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 QQ I RI + G ++ ++Y L+A +T++E V R TK + + + Sbjct: 976 VDQQGIFRI-----YRLGQQKPCYIYRLLAIHTMEEKVYSRAVTKQAMSHRVAD 1024 >gi|297742194|emb|CBI33981.3| unnamed protein product [Vitis vinifera] Length = 554 Score = 83.4 bits (205), Expect = 2e-14, Method: Composition-based stats. Identities = 30/166 (18%), Positives = 67/166 (40%), Gaps = 24/166 (14%) Query: 49 KEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQK---------------AFPQGRT 93 V + + A E N ++V F L L R Sbjct: 342 IGVKTKFLMAFIRFSETMNEK-VLVFSQFLDPLTYLMDQLKYHFHWIVGKEVLYMDGQRD 400 Query: 94 LDKDPCTIQEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERI 151 + + +I +N+ ++ +L A +C G++L G + ++ + W+ +ER Sbjct: 401 VKQRQSSINTFNDPASQVRVLLASTKACSEGISL-VGASRVILLDVVWNPS-----VERQ 454 Query: 152 GVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 ++R + G ++ V++Y+L+ T++E R K + +L+ ++ Sbjct: 455 AISRAYRLGQRKVVYIYHLLTSGTMEEEKYCRQAKKDRLSELVFSS 500 >gi|218188229|gb|EEC70656.1| hypothetical protein OsI_01941 [Oryza sativa Indica Group] Length = 1259 Score = 83.4 bits (205), Expect = 2e-14, Method: Composition-based stats. Identities = 38/220 (17%), Positives = 80/220 (36%), Gaps = 35/220 (15%) Query: 6 KFQRELYCDLQGENIEAFNSASKTVKCLQLA-----------------NGAVYYDEEKHW 48 + Q++ Y L +++E N+ + + L +A G Y E Sbjct: 469 QMQKQYYRALLQKDLEVINAGGERKRLLNIAMQLRKCCNHPYLFQGAEPGPPYTTGEHLV 528 Query: 49 KEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARL---------QKAFPQGRTLDKDP- 98 + + + K + +++ L L Q G T +D Sbjct: 529 ENAGKMVLLDKLLPKLKDRDSRVLIFSQMTRLLDILEDYLMYRGYQYCRIDGNTGGEDRD 588 Query: 99 CTIQEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 +I+ +N+ + + + G G+NL +++V + W+ + Q R Sbjct: 589 ASIEAFNKPGSEKFVFLLSTRAGGLGINL-ATADVVVLYDSDWNPQADLQA-----QDRA 642 Query: 157 RQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + G K+ V V+ + TI+E V++R K + L++ Sbjct: 643 HRIGQKKEVQVFRFCTEYTIEEKVIERAYKKLALDALVIQ 682 Score = 78.8 bits (193), Expect = 4e-13, Method: Composition-based stats. Identities = 21/104 (20%), Positives = 46/104 (44%), Gaps = 8/104 (7%) Query: 95 DKDPCTIQEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIG 152 + +I+ +N+ + + + G G+NL +++V + W+ + Q Sbjct: 846 EDRDASIEAFNKPGSEKFVFLLSTRAGGLGINL-ATADVVVLYDSDWNPQADLQA----- 899 Query: 153 VTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 R + G K+ V V+ + TI+E V++R K + L++ Sbjct: 900 QDRAHRIGQKKEVQVFRFCTEYTIEEKVIERAYKKLALDALVIQ 943 >gi|195111562|ref|XP_002000347.1| GI10182 [Drosophila mojavensis] gi|193916941|gb|EDW15808.1| GI10182 [Drosophila mojavensis] Length = 1389 Score = 83.4 bits (205), Expect = 2e-14, Method: Composition-based stats. Identities = 22/106 (20%), Positives = 46/106 (43%), Gaps = 9/106 (8%) Query: 94 LDKDPCTIQEWNEG---KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 +++ +++N + L + G G+NL N +V F + W+ Q I R Sbjct: 1054 VEQRESMCKKFNNASNLRARLFLISTRAGGLGINL-VAANRVVIFDVSWNPSHDTQSIFR 1112 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + + G + ++Y LIA T+++ V +R K +++ Sbjct: 1113 V-----YRFGQVKPCYIYRLIAMGTMEQKVYERQVAKQATAKRVID 1153 >gi|67970134|dbj|BAE01411.1| unnamed protein product [Macaca fascicularis] Length = 889 Score = 83.4 bits (205), Expect = 2e-14, Method: Composition-based stats. Identities = 30/157 (19%), Positives = 62/157 (39%), Gaps = 19/157 (12%) Query: 51 VHDEKIKALEVIIEKAN--AAPIIVAYHFNSDLARL---------QKAFPQGRT-LDKDP 98 + K + L I+ + +++ F L L + G+T + + Sbjct: 714 LDSGKFRVLGCILSELKQKGDRVVLFSQFTMMLDILEVLLKHHQHRYLRLDGKTQISERI 773 Query: 99 CTIQEWNEG-KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 I E+N I + + G G+NL N+++ + + +Q +R Sbjct: 774 HLIDEFNTDMDIFVFLLSTKAGGLGINLT-SANVVILHDIDCNPYNDKQAEDRC-----H 827 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 + G + V V LI+Q TI+E +L+ + K ++ + Sbjct: 828 RVGQTKEVLVIKLISQGTIEESMLKINQQKLKLEQDM 864 >gi|17562600|ref|NP_504523.1| LEThal family member (let-418) [Caenorhabditis elegans] gi|3294508|gb|AAC25894.1| Lethal protein 418, confirmed by transcript evidence [Caenorhabditis elegans] gi|11095333|gb|AAG29838.1| LET-418 [Caenorhabditis elegans] Length = 1829 Score = 83.4 bits (205), Expect = 2e-14, Method: Composition-based stats. Identities = 23/167 (13%), Positives = 57/167 (34%), Gaps = 20/167 (11%) Query: 45 EKHWKEVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARL---------QKAFPQGRT 93 E + K L+ ++ K +++ L + + G Sbjct: 917 EGTALIKNSGKFVLLQKMLRKLKDGGHRVLIFSQMTRMLDIMEDLCEYEGYRYERIDGSI 976 Query: 94 LDKDPCT-IQEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 + + I +N + + + G G+NL + ++ + W+ Q Sbjct: 977 MGQMRQDAIDRYNAPGAQQFIFLLSTRAGGLGINL-ATADTVIIYDSDWNPHNDIQA--- 1032 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 +R + G K V +Y + + +++E + + K + L++ A Sbjct: 1033 --FSRAHRLGQKHKVMIYRFVTKKSVEEKITSVAKKKMLLNHLVVRA 1077 >gi|738309|prf||1924378A nucler protein GRB1 Length = 1613 Score = 83.4 bits (205), Expect = 2e-14, Method: Composition-based stats. Identities = 28/160 (17%), Positives = 60/160 (37%), Gaps = 20/160 (12%) Query: 52 HDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQ-----KAFPQGRTLDKDPCT---- 100 K + L+ I+ +A +++ S + ++ + F R Sbjct: 1076 ASGKFELLDRILPKLRATNHKVLLFCQMTSLMTIMEDYLAYRGFKYLRLAGTTKAEDRGM 1135 Query: 101 -IQEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 ++ +NE + + + G GLNLQ + ++ F W+ + Q R Sbjct: 1136 LLKTFNEPGSEYFIFLLSTRAGGLGLNLQ-SADTVIIFDSDWNPHQDLQA-----QDRAH 1189 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + G + V V L N+++E +L + K + ++ A Sbjct: 1190 RIGQRNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQA 1229 >gi|71297047|gb|AAH35183.1| C9orf102 protein [Homo sapiens] gi|119613042|gb|EAW92636.1| RAD26L hypothetical protein, isoform CRA_b [Homo sapiens] Length = 523 Score = 83.4 bits (205), Expect = 2e-14, Method: Composition-based stats. Identities = 33/152 (21%), Positives = 61/152 (40%), Gaps = 19/152 (12%) Query: 53 DEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQK---------AFPQGRTLDKDP-CT 100 K+K L+ ++ + N +++ L LQ+ G T ++ Sbjct: 329 SGKMKVLQQLLNHCRKNRDKVLLFSFSTKLLDVLQQYCMASGLDYRRLDGSTKSEERLKI 388 Query: 101 IQEWNE-GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQA 159 ++E+N + + + G GLN G N++V F W+ Q I+R + Sbjct: 389 VKEFNSTQDVNICLVSTMAGGLGLNF-VGANVVVLFDPTWNPANDLQAIDR-----AYRI 442 Query: 160 GFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQ 191 G R V V LI+ T++E++ R K + Sbjct: 443 GQCRDVKVLRLISLGTVEEIMYLRQIYKQQLH 474 >gi|297293038|ref|XP_002804187.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1-like isoform 3 [Macaca mulatta] Length = 891 Score = 83.4 bits (205), Expect = 2e-14, Method: Composition-based stats. Identities = 30/157 (19%), Positives = 62/157 (39%), Gaps = 19/157 (12%) Query: 51 VHDEKIKALEVIIEKAN--AAPIIVAYHFNSDLARL---------QKAFPQGRT-LDKDP 98 + K + L I+ + +++ F L L + G+T + + Sbjct: 716 LDSGKFRVLGCILSELKQKGDRVVLFSQFTMMLDILEVLLKHHQHRYLRLDGKTQISERI 775 Query: 99 CTIQEWNEG-KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 I E+N I + + G G+NL N+++ + + +Q +R Sbjct: 776 HLIDEFNTDMDIFVFLLSTKAGGLGINLT-SANVVILHDIDCNPYNDKQAEDRC-----H 829 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 + G + V V LI+Q TI+E +L+ + K ++ + Sbjct: 830 RVGQTKEVLVIKLISQGTIEESMLKINQQKLKLEQDM 866 >gi|189241668|ref|XP_967398.2| PREDICTED: similar to brahma CG5942-PA, partial [Tribolium castaneum] Length = 1402 Score = 83.4 bits (205), Expect = 2e-14, Method: Composition-based stats. Identities = 29/160 (18%), Positives = 60/160 (37%), Gaps = 20/160 (12%) Query: 52 HDEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQ---------KAFPQGRTLDKDPCT 100 K + L+ I+ K +++ + ++ G T +D Sbjct: 911 ASGKFELLDRILPKLKVTGHRVLLFCQMTQLMTIMEDYLSWRGFGYLRLDGTTKAEDRGD 970 Query: 101 I-QEWN--EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 + +++N L + G GLNLQ + ++ F W+ + Q R Sbjct: 971 LLKKFNAKNSDYFLFLLSTRAGGLGLNLQ-SADTVIIFDSDWNPHQDLQA-----QDRAH 1024 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + G + V V L+ N+++E +L R K + + ++ A Sbjct: 1025 RIGQQNEVRVLRLMTVNSVEERILAAARYKLNMDEKVIQA 1064 >gi|323335419|gb|EGA76705.1| Uls1p [Saccharomyces cerevisiae Vin13] Length = 1619 Score = 83.4 bits (205), Expect = 2e-14, Method: Composition-based stats. Identities = 22/156 (14%), Positives = 63/156 (40%), Gaps = 18/156 (11%) Query: 56 IKALEVIIEKANAAPIIVAYHFNSDLARLQK------AFPQGRTLD-----KDPCTIQEW 104 I+ ++ + +++ II+ F + L+ FP + + + I E+ Sbjct: 1449 IQVIQRVFDESATEKIIIFSQFTTFFEILEHFLKNKLNFPYLKYIGSMNAQRRSDVINEF 1508 Query: 105 N-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKR 163 + + +L + GL L ++++ +W+ +Q +R + + Sbjct: 1509 YRDPEKRILLISMKAGNSGLTLTCANHVVI-VDPFWNPYVEEQAQDRC-----YRISQTK 1562 Query: 164 AVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 V V+ L ++++++ + + + K + D ++ K Sbjct: 1563 KVQVHKLFIKDSVEDRISELQKRKKEMVDSAMDPGK 1598 >gi|195477868|ref|XP_002086420.1| GE23128 [Drosophila yakuba] gi|194186210|gb|EDW99821.1| GE23128 [Drosophila yakuba] Length = 1634 Score = 83.4 bits (205), Expect = 2e-14, Method: Composition-based stats. Identities = 22/105 (20%), Positives = 45/105 (42%), Gaps = 8/105 (7%) Query: 95 DKDPCTIQEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIG 152 + ++++N + + + G GLNLQ + +V F W+ + Q Sbjct: 1147 EDRGELLRKFNAKGSDVFVFLLSTRAGGLGLNLQT-ADTVVIFDSDWNPHQDLQA----- 1200 Query: 153 VTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 R + G + V V L+ N+++E +L R K + + ++ A Sbjct: 1201 QDRAHRIGQRNEVRVLRLMTVNSVEERILAAARYKLNMDEKVIQA 1245 >gi|54294007|ref|YP_126422.1| hypothetical protein lpl1068 [Legionella pneumophila str. Lens] gi|53753839|emb|CAH15305.1| hypothetical protein lpl1068 [Legionella pneumophila str. Lens] Length = 1128 Score = 83.4 bits (205), Expect = 2e-14, Method: Composition-based stats. Identities = 34/182 (18%), Positives = 67/182 (36%), Gaps = 33/182 (18%) Query: 41 YYDEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHF----NSD-----------LAR 83 Y ++ ++ ++KA I++K A +++ + D L R Sbjct: 794 YINDNEYI--GGSARLKACFEILDKIYAKREKVLIFIEYNEWHRHDFLCQIIKTKYKLDR 851 Query: 84 LQKAFPQGRTLDKDPCTIQEWNE--GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDL 141 L A + ++ E GK ++ P + G G+ L N ++ + WW+ Sbjct: 852 LPMAINGQINSKTRQHIVDKFQEERGKFDVMLLSPRAGGVGITLT-AANHIIHLTRWWNP 910 Query: 142 EEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDE------LVLQRLRTKSTIQDLLL 195 Q +RI + G + V +YY +A + E + Q L K + ++ Sbjct: 911 AVEDQANDRI-----YRIGQESDVHIYYPLAIHAEYENSCFDYNLHQLLEKKREVSQQVI 965 Query: 196 NA 197 A Sbjct: 966 IA 967 >gi|67523601|ref|XP_659860.1| hypothetical protein AN2256.2 [Aspergillus nidulans FGSC A4] gi|40744673|gb|EAA63829.1| hypothetical protein AN2256.2 [Aspergillus nidulans FGSC A4] gi|259487649|tpe|CBF86480.1| TPA: SNF2 family helicase, putative (AFU_orthologue; AFUA_5G06590) [Aspergillus nidulans FGSC A4] Length = 972 Score = 83.4 bits (205), Expect = 2e-14, Method: Composition-based stats. Identities = 36/163 (22%), Positives = 62/163 (38%), Gaps = 20/163 (12%) Query: 42 YDEEKHWKEVHDEKIKALEVIIEKA---NAAPIIVAYHFNSDLA----RLQKAFPQGRTL 94 D+ + KI+AL I+ A ++ + S L LQ A Q + Sbjct: 788 TDDVSADPDNPSSKIEALIKILTAHGQVEATKTVIFSQWTSFLTLVEPHLQNAGIQFARI 847 Query: 95 D-------KDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQM 147 D +D + + K +L A + C GLNL N + WW Q Sbjct: 848 DGKMTSIARDRSMRRFSTDPKCTVLLASLSVCSVGLNL-VAANQAILADSWWAPAIEDQA 906 Query: 148 IERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 ++R+ + G R V+ L+ +++I++ VL K + Sbjct: 907 VDRV-----YRLGQTRETTVWRLVMEDSIEDRVLAIQEQKRKL 944 >gi|195395382|ref|XP_002056315.1| GJ10883 [Drosophila virilis] gi|194143024|gb|EDW59427.1| GJ10883 [Drosophila virilis] Length = 1315 Score = 83.4 bits (205), Expect = 2e-14, Method: Composition-based stats. Identities = 22/106 (20%), Positives = 46/106 (43%), Gaps = 9/106 (8%) Query: 94 LDKDPCTIQEWNEG---KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 +++ +++N + L + G G+NL N +V F + W+ Q I R Sbjct: 981 VEQRESMCKKFNNASNLRARLFLISTRAGGLGINL-VAANRVVIFDVSWNPSHDTQSIFR 1039 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + + G + ++Y LIA T+++ V +R K +++ Sbjct: 1040 V-----YRFGQVKPCYIYRLIAMGTMEQKVYERQVAKQATAKRVID 1080 >gi|114595206|ref|XP_001163635.1| PREDICTED: SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1 isoform 1 [Pan troglodytes] Length = 891 Score = 83.4 bits (205), Expect = 2e-14, Method: Composition-based stats. Identities = 30/157 (19%), Positives = 62/157 (39%), Gaps = 19/157 (12%) Query: 51 VHDEKIKALEVIIEKAN--AAPIIVAYHFNSDLARL---------QKAFPQGRT-LDKDP 98 + K + L I+ + +++ F L L + G+T + + Sbjct: 716 LDSGKFRVLGCILSELKQKGDRVVLFSQFTMMLDILEVLLKHHQHRYLRLDGKTQISERI 775 Query: 99 CTIQEWNEG-KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 I E+N I + + G G+NL N+++ + + +Q +R Sbjct: 776 HLIDEFNTDMDIFVFLLSTKAGGLGINLT-SANVVILHDIDCNPYNDKQAEDRC-----H 829 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 + G + V V LI+Q TI+E +L+ + K ++ + Sbjct: 830 RVGQTKEVLVIKLISQGTIEESMLKINQQKLKLEQDM 866 >gi|14042443|dbj|BAB55248.1| unnamed protein product [Homo sapiens] Length = 521 Score = 83.4 bits (205), Expect = 2e-14, Method: Composition-based stats. Identities = 33/216 (15%), Positives = 78/216 (36%), Gaps = 33/216 (15%) Query: 1 MKQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYD-------EEKHWKEVHD 53 MK F+ E + ++ N S+ KC + +D E Sbjct: 182 MKDLDAFENET-----AKKVKLQNILSQLRKC---VDHPYLFDGVEPEPFEVGDHLTEAS 233 Query: 54 EKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAFP---------QGRTLDKDPC-TI 101 K+ L+ ++ + +++ L Q G ++ I Sbjct: 234 GKLHLLDKLLAFLYSGGHRVLLFSQMTQMLDIPQDYMDYRGYSYERVDGSVRGEERHLAI 293 Query: 102 QEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGF 161 + + + I + + G G+NL + ++F ++ + Q R + G Sbjct: 294 KNFGQQPIFVFLLSTRAGGVGMNLT-AADTVIFVDSDFNPQNDLQAAAR-----AHRIGQ 347 Query: 162 KRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 ++V V LI ++T++E+V ++ +K + ++++ Sbjct: 348 NKSVKVIRLIGRDTVEEIVYRKAASKLQLTNMIIEG 383 >gi|256273323|gb|EEU08262.1| Uls1p [Saccharomyces cerevisiae JAY291] Length = 1619 Score = 83.1 bits (204), Expect = 2e-14, Method: Composition-based stats. Identities = 22/156 (14%), Positives = 63/156 (40%), Gaps = 18/156 (11%) Query: 56 IKALEVIIEKANAAPIIVAYHFNSDLARLQK------AFPQGRTLD-----KDPCTIQEW 104 I+ ++ + +++ II+ F + L+ FP + + + I E+ Sbjct: 1449 IQVIQRVFDESATEKIIIFSQFTTFFEILEHFLKNKLNFPYLKYIGSMNAQRRSDVINEF 1508 Query: 105 N-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKR 163 + + +L + GL L ++++ +W+ +Q +R + + Sbjct: 1509 YRDPEKRILLISMKAGNSGLTLTCANHVVI-VDPFWNPYVEEQAQDRC-----YRISQTK 1562 Query: 164 AVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 V V+ L ++++++ + + + K + D ++ K Sbjct: 1563 KVQVHKLFIKDSVEDRISELQKRKKEMVDSAMDPGK 1598 >gi|6324765|ref|NP_014834.1| Uls1p [Saccharomyces cerevisiae S288c] gi|74676476|sp|Q08562|ULS1_YEAST RecName: Full=ATP-dependent helicase ULS1; AltName: Full=Role in silencing protein 1; AltName: Full=Ubiquitin ligase for SUMO conjugates protein 1 gi|1420457|emb|CAA99400.1| unnamed protein product [Saccharomyces cerevisiae] gi|190407507|gb|EDV10774.1| SWI2/SNF2 DNA-dependent ATPase family member [Saccharomyces cerevisiae RM11-1a] gi|285815070|tpg|DAA10963.1| TPA: Uls1p [Saccharomyces cerevisiae S288c] Length = 1619 Score = 83.1 bits (204), Expect = 2e-14, Method: Composition-based stats. Identities = 22/156 (14%), Positives = 63/156 (40%), Gaps = 18/156 (11%) Query: 56 IKALEVIIEKANAAPIIVAYHFNSDLARLQK------AFPQGRTLD-----KDPCTIQEW 104 I+ ++ + +++ II+ F + L+ FP + + + I E+ Sbjct: 1449 IQVIQRVFDESATEKIIIFSQFTTFFEILEHFLKNKLNFPYLKYIGSMNAQRRSDVINEF 1508 Query: 105 N-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKR 163 + + +L + GL L ++++ +W+ +Q +R + + Sbjct: 1509 YRDPEKRILLISMKAGNSGLTLTCANHVVI-VDPFWNPYVEEQAQDRC-----YRISQTK 1562 Query: 164 AVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 V V+ L ++++++ + + + K + D ++ K Sbjct: 1563 KVQVHKLFIKDSVEDRISELQKRKKEMVDSAMDPGK 1598 >gi|297293040|ref|XP_002804188.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1-like isoform 4 [Macaca mulatta] Length = 889 Score = 83.1 bits (204), Expect = 2e-14, Method: Composition-based stats. Identities = 30/157 (19%), Positives = 62/157 (39%), Gaps = 19/157 (12%) Query: 51 VHDEKIKALEVIIEKAN--AAPIIVAYHFNSDLARL---------QKAFPQGRT-LDKDP 98 + K + L I+ + +++ F L L + G+T + + Sbjct: 714 LDSGKFRVLGCILSELKQKGDRVVLFSQFTMMLDILEVLLKHHQHRYLRLDGKTQISERI 773 Query: 99 CTIQEWNEG-KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 I E+N I + + G G+NL N+++ + + +Q +R Sbjct: 774 HLIDEFNTDMDIFVFLLSTKAGGLGINLT-SANVVILHDIDCNPYNDKQAEDRC-----H 827 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 + G + V V LI+Q TI+E +L+ + K ++ + Sbjct: 828 RVGQTKEVLVIKLISQGTIEESMLKINQQKLKLEQDM 864 >gi|194873165|ref|XP_001973152.1| GG13509 [Drosophila erecta] gi|190654935|gb|EDV52178.1| GG13509 [Drosophila erecta] Length = 1634 Score = 83.1 bits (204), Expect = 2e-14, Method: Composition-based stats. Identities = 22/105 (20%), Positives = 45/105 (42%), Gaps = 8/105 (7%) Query: 95 DKDPCTIQEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIG 152 + ++++N + + + G GLNLQ + +V F W+ + Q Sbjct: 1147 EDRGELLRKFNAKGSDVFVFLLSTRAGGLGLNLQT-ADTVVIFDSDWNPHQDLQA----- 1200 Query: 153 VTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 R + G + V V L+ N+++E +L R K + + ++ A Sbjct: 1201 QDRAHRIGQRNEVRVLRLMTVNSVEERILAAARYKLNMDEKVIQA 1245 >gi|156544309|ref|XP_001607162.1| PREDICTED: similar to helicase [Nasonia vitripennis] Length = 2220 Score = 83.1 bits (204), Expect = 2e-14, Method: Composition-based stats. Identities = 31/160 (19%), Positives = 63/160 (39%), Gaps = 20/160 (12%) Query: 52 HDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQ---------KAFPQGRTLDKDPCT 100 K + L+ I+ K A +++ + ++ G T +D Sbjct: 1721 ASGKFELLDRILPKLKATGHRVLLFCQMTQLMTIMEDYLQWRGFLYLRLDGTTKAEDRGD 1780 Query: 101 I-QEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 + +++N+ + L + G GLNLQ + ++ F W+ + Q R Sbjct: 1781 LLKKFNDPGSEFFLFILSTRAGGLGLNLQ-AADTVIIFDSDWNPHQDLQA-----QDRAH 1834 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + G K V V L+ N+++E +L R K + + ++ A Sbjct: 1835 RIGQKNEVRVLRLMTVNSVEERILAAARYKLNMDEKVIQA 1874 >gi|21112521|gb|AAM40750.1| helicase [Xanthomonas campestris pv. campestris str. ATCC 33913] gi|66574424|gb|AAY49834.1| helicase [Xanthomonas campestris pv. campestris str. 8004] Length = 1065 Score = 83.1 bits (204), Expect = 2e-14, Method: Composition-based stats. Identities = 39/218 (17%), Positives = 77/218 (35%), Gaps = 42/218 (19%) Query: 9 RELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEK------HWKEVHDEKI----KA 58 RE +G + + S + Q+ + +++ H K+ + Sbjct: 839 RETVDSGEGGD---TAALSLLHQLRQICANPLAAADDRSEFLSLDEHLRHSPKLAWLIEK 895 Query: 59 LEVIIEKANAAPIIVAYHFNSDLARLQKAFP----------------QGRTLDKDPCTIQ 102 L+ I +A +IV F +Q+A + D I Sbjct: 896 LQEI--QATGEKVIVFTEFRDIQRLIQRAIASRLSYQASIVNGSTSVEAGADDSRQIIID 953 Query: 103 EWNE-GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGF 161 + ++ + G G+N+Q N ++ F+ W+ + Q +R + G Sbjct: 954 AFQAKPDFGVIVLSTTAVGFGVNIQ-AANHVIHFTRPWNPAKEDQATDR-----AYRIGQ 1007 Query: 162 KRAVFVYYLIAQN----TIDELVLQRLRTKSTIQDLLL 195 ++ VFVYY + +E V +RL TK + + +L Sbjct: 1008 EKEVFVYYPTVLGDGFESFEERVAKRLATKRKLSNDML 1045 >gi|71659675|ref|XP_821558.1| DNA repair protein [Trypanosoma cruzi strain CL Brener] gi|70886941|gb|EAN99707.1| DNA repair protein, putative [Trypanosoma cruzi] Length = 983 Score = 83.1 bits (204), Expect = 2e-14, Method: Composition-based stats. Identities = 26/156 (16%), Positives = 57/156 (36%), Gaps = 18/156 (11%) Query: 54 EKIKALEV-IIEKANAAPIIVAYHFNSDLARLQKAFPQGRT----------LDKDPCTIQ 102 K+ A+ I+ II+ F L +Q + L + +Q Sbjct: 815 SKLDAIAEYILSVPKDEKIIIFSQFGDMLELIQIWLQRASVKAVKLTGSLMLSQRQAVLQ 874 Query: 103 EW-NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGF 161 + ++ + + + G GLNLQ N ++ WW+ Q +R + G Sbjct: 875 AFLHDPGVRAILISLKAGGEGLNLQV-ANHVILVDPWWNPAVEMQAAQR-----AHRIGQ 928 Query: 162 KRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + V V + + +++E ++ K + + ++ Sbjct: 929 TKPVRVVRFVVERSVEERMMDLQDKKMLVIEGTIDG 964 >gi|151945478|gb|EDN63720.1| Member of the SWI/SNF family of DNA-dependent ATPases [Saccharomyces cerevisiae YJM789] Length = 1619 Score = 83.1 bits (204), Expect = 2e-14, Method: Composition-based stats. Identities = 22/156 (14%), Positives = 63/156 (40%), Gaps = 18/156 (11%) Query: 56 IKALEVIIEKANAAPIIVAYHFNSDLARLQK------AFPQGRTLD-----KDPCTIQEW 104 I+ ++ + +++ II+ F + L+ FP + + + I E+ Sbjct: 1449 IQVIQRVFDESATEKIIIFSQFTTFFEILEHFLKNKLNFPYLKYIGSMNAQRRSDVINEF 1508 Query: 105 N-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKR 163 + + +L + GL L ++++ +W+ +Q +R + + Sbjct: 1509 YRDPEKRILLISMKAGNSGLTLTCANHVVI-VDPFWNPYVEEQAQDRC-----YRISQTK 1562 Query: 164 AVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 V V+ L ++++++ + + + K + D ++ K Sbjct: 1563 KVQVHKLFIKDSVEDRISELQKRKKEMVDSAMDPGK 1598 >gi|74200625|dbj|BAE24713.1| unnamed protein product [Mus musculus] Length = 1261 Score = 83.1 bits (204), Expect = 2e-14, Method: Composition-based stats. Identities = 30/160 (18%), Positives = 62/160 (38%), Gaps = 20/160 (12%) Query: 52 HDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAF---------PQGRTLDKDPCT 100 K + L+ I+ +A +++ S + ++ F G T +D Sbjct: 877 ASGKFELLDRILPKLRATNHKVLLFCQMTSLMTIMEDYFAYRGFKYLRLDGTTKAEDRGM 936 Query: 101 I-QEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 + + +NE + + + G GLNLQ + ++ F W+ + Q R Sbjct: 937 LLKTFNEPGSEYFIFLLSTRAGGLGLNLQ-SADTVIIFDSDWNPHQDLQA-----QDRAH 990 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + G + V V L N+++E +L + K + ++ A Sbjct: 991 RIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQA 1030 >gi|157012|gb|AAA19661.1| brahma protein [Drosophila melanogaster] Length = 1638 Score = 83.1 bits (204), Expect = 2e-14, Method: Composition-based stats. Identities = 22/105 (20%), Positives = 45/105 (42%), Gaps = 8/105 (7%) Query: 95 DKDPCTIQEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIG 152 + ++++N + + + G GLNLQ + +V F W+ + Q Sbjct: 1151 EDRGELLRKFNAKGSDVFVFLLSTRAGGLGLNLQT-ADTVVIFDSDWNPHQDLQA----- 1204 Query: 153 VTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 R + G + V V L+ N+++E +L R K + + ++ A Sbjct: 1205 QDRAHRIGQRNEVRVLRLMTVNSVEERILAAARYKLNMDEKVIQA 1249 >gi|309361932|emb|CAP29254.2| CBR-LET-418 protein [Caenorhabditis briggsae AF16] Length = 1863 Score = 83.1 bits (204), Expect = 2e-14, Method: Composition-based stats. Identities = 24/167 (14%), Positives = 57/167 (34%), Gaps = 20/167 (11%) Query: 45 EKHWKEVHDEKIKALEVIIEKAN--AAPIIVAYHFNSDLARL---------QKAFPQGRT 93 E + K L+ ++ K +++ + L + G Sbjct: 919 EGTALIKNSGKFVLLQKMLRKLKDTGHRVLIFSQMTMMMDILEDFCDVEGYKYERIDGSI 978 Query: 94 LDKDPCT-IQEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 + I +N + + + G G+NL + ++ + W+ Q Sbjct: 979 TGQMRQDAIDRYNAPGAQQFVFLLSTRAGGLGINL-ATADTVIIYDSDWNPHNDIQA--- 1034 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 +R + G K V +Y + +N+++E + + K + L++ A Sbjct: 1035 --FSRAHRLGQKHKVMIYRFVTKNSVEERITTVAKKKMLLNHLVVRA 1079 >gi|145479813|ref|XP_001425929.1| hypothetical protein [Paramecium tetraurelia strain d4-2] gi|124393001|emb|CAK58531.1| unnamed protein product [Paramecium tetraurelia] Length = 1299 Score = 83.1 bits (204), Expect = 2e-14, Method: Composition-based stats. Identities = 37/221 (16%), Positives = 82/221 (37%), Gaps = 31/221 (14%) Query: 1 MKQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANG---AVYY----DEEKHWKEVHD 53 ++ Y K + D + +A N + + + N Y +E+ Sbjct: 666 LRNYEKLK---VLDQKKGASKA-NLLNILMSLRLVCNHPYLFTYKREFPNEDIEEMINQS 721 Query: 54 EKIKALEVIIEKANA--APIIVAYHFNSDLARLQ----------KAFPQGRTLDKDPCTI 101 K+K ++ II + +++ F L +Q + ++ I Sbjct: 722 NKLKFVDRIIPRLLEMQHKMLIFSQFTMMLDLMQHYLQLRGYSYERLDGTTSIMDRQRII 781 Query: 102 QEWNE--GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQA 159 +N GK + + G G+NL + ++F ++ Q I R + Sbjct: 782 DSFNNSTGKSKIFLLSTRAGGLGINLT-SADTIIFTDSDFNPYRDLQAISR-----AHRM 835 Query: 160 GFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKK 200 G V V+ L+++ T +E ++Q K ++++++N + K Sbjct: 836 GQTNKVKVFRLVSKYTAEERIIQIATKKLLLEEIIINPINK 876 >gi|56474875|gb|AAV91782.1| Brg1 [Xenopus laevis] Length = 1600 Score = 83.1 bits (204), Expect = 2e-14, Method: Composition-based stats. Identities = 30/177 (16%), Positives = 62/177 (35%), Gaps = 24/177 (13%) Query: 35 LANGAVYYDEEKHWKEVHDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAFPQGR 92 G V + K + L+ I+ +A +++ + + ++ F Sbjct: 1050 FTGGIVQGQD----VYRASGKFELLDRILPKLRATNHKVLLFCQMTTLMTIMEDYFAYRG 1105 Query: 93 TL----------DKDPCTIQEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWD 140 D ++ +NE + + + G GLNLQ + +V F W+ Sbjct: 1106 FKYLRLDGTTKADDRGMLLKTFNEPGSEYFIFLLSTRAGGLGLNLQ-SADTVVIFDSDWN 1164 Query: 141 LEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + Q R + G + V V L N+++E +L + K + ++ A Sbjct: 1165 PHQDLQA-----QDRAHRIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQA 1216 >gi|195327907|ref|XP_002030658.1| GM24456 [Drosophila sechellia] gi|194119601|gb|EDW41644.1| GM24456 [Drosophila sechellia] Length = 1638 Score = 83.1 bits (204), Expect = 2e-14, Method: Composition-based stats. Identities = 22/105 (20%), Positives = 45/105 (42%), Gaps = 8/105 (7%) Query: 95 DKDPCTIQEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIG 152 + ++++N + + + G GLNLQ + +V F W+ + Q Sbjct: 1151 EDRGELLRKFNAKGSDVFVFLLSTRAGGLGLNLQT-ADTVVIFDSDWNPHQDLQA----- 1204 Query: 153 VTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 R + G + V V L+ N+++E +L R K + + ++ A Sbjct: 1205 QDRAHRIGQRNEVRVLRLMTVNSVEERILAAARYKLNMDEKVIQA 1249 >gi|17985967|ref|NP_536746.1| brahma, isoform A [Drosophila melanogaster] gi|24664914|ref|NP_730089.1| brahma, isoform B [Drosophila melanogaster] gi|19857556|sp|P25439|BRM_DROME RecName: Full=ATP-dependent helicase brm; AltName: Full=Homeotic gene regulator; AltName: Full=Protein brahma gi|7294205|gb|AAF49557.1| brahma, isoform B [Drosophila melanogaster] gi|20152033|gb|AAM11376.1| LD36356p [Drosophila melanogaster] gi|23093402|gb|AAF49558.3| brahma, isoform A [Drosophila melanogaster] Length = 1638 Score = 83.1 bits (204), Expect = 2e-14, Method: Composition-based stats. Identities = 22/105 (20%), Positives = 45/105 (42%), Gaps = 8/105 (7%) Query: 95 DKDPCTIQEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIG 152 + ++++N + + + G GLNLQ + +V F W+ + Q Sbjct: 1151 EDRGELLRKFNAKGSDVFVFLLSTRAGGLGLNLQT-ADTVVIFDSDWNPHQDLQA----- 1204 Query: 153 VTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 R + G + V V L+ N+++E +L R K + + ++ A Sbjct: 1205 QDRAHRIGQRNEVRVLRLMTVNSVEERILAAARYKLNMDEKVIQA 1249 >gi|254580745|ref|XP_002496358.1| ZYRO0C16544p [Zygosaccharomyces rouxii] gi|238939249|emb|CAR27425.1| ZYRO0C16544p [Zygosaccharomyces rouxii] Length = 759 Score = 83.1 bits (204), Expect = 2e-14, Method: Composition-based stats. Identities = 27/169 (15%), Positives = 55/169 (32%), Gaps = 23/169 (13%) Query: 43 DEEKHWKEVHDEKIKAL-EVIIEKANAA---PIIVAYHFNSDLARLQKAFPQG------- 91 + + WK KI+AL E + + IV F S L + + Sbjct: 579 NMQGTWK--SSTKIEALVEELYNLRSDKRTIKSIVFSQFTSMLDLIDWRLKRAGFETVKL 636 Query: 92 ----RTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQM 147 +D + + + G LNL + + WW+ Q Sbjct: 637 QGSMSPTQRDETIKYFMKNIRCEVFLVSLKAGGVALNLCEASQVFIM-DPWWNPSVEWQS 695 Query: 148 IERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 +R+ + G R V + +++I+ +++ K+ + +N Sbjct: 696 GDRV-----HRIGQYRPVKITRFCIEDSIESRIIELQEKKANMIHATIN 739 >gi|268557732|ref|XP_002636856.1| C. briggsae CBR-LET-418 protein [Caenorhabditis briggsae] Length = 1849 Score = 83.1 bits (204), Expect = 2e-14, Method: Composition-based stats. Identities = 24/167 (14%), Positives = 57/167 (34%), Gaps = 20/167 (11%) Query: 45 EKHWKEVHDEKIKALEVIIEKAN--AAPIIVAYHFNSDLARL---------QKAFPQGRT 93 E + K L+ ++ K +++ + L + G Sbjct: 914 EGTALIKNSGKFVLLQKMLRKLKDTGHRVLIFSQMTMMMDILEDFCDVEGYKYERIDGSI 973 Query: 94 LDKDPCT-IQEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 + I +N + + + G G+NL + ++ + W+ Q Sbjct: 974 TGQMRQDAIDRYNAPGAQQFVFLLSTRAGGLGINL-ATADTVIIYDSDWNPHNDIQA--- 1029 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 +R + G K V +Y + +N+++E + + K + L++ A Sbjct: 1030 --FSRAHRLGQKHKVMIYRFVTKNSVEERITTVAKKKMLLNHLVVRA 1074 >gi|329929408|ref|ZP_08283156.1| SNF2 family N-terminal domain protein [Paenibacillus sp. HGF5] gi|328936495|gb|EGG32940.1| SNF2 family N-terminal domain protein [Paenibacillus sp. HGF5] Length = 610 Score = 83.1 bits (204), Expect = 2e-14, Method: Composition-based stats. Identities = 33/156 (21%), Positives = 66/156 (42%), Gaps = 17/156 (10%) Query: 52 HDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAF--------PQGRTLDKDPCT-IQ 102 + K + +I++ N +IV + + L F P +++ + Sbjct: 400 ANTKAEKAIELIQQMNEK-VIVFTEYRATQEYLLNYFRDHGLISVPYRGGMNRGKKDWMM 458 Query: 103 EWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFK 162 + GK ++ A + G G+NLQ+ + ++ F L W+ +Q I R+ + G Sbjct: 459 DLFRGKAQVMIA-TEAGGEGINLQF-CHHMINFDLPWNPMRVEQRIGRV-----HRLGQT 511 Query: 163 RAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNAL 198 V +Y L TI+E +L L K + ++++ L Sbjct: 512 NDVKIYNLSTSGTIEEHILNLLHEKINMFEMVIGGL 547 >gi|312198809|ref|YP_004018870.1| SNF2-related protein [Frankia sp. EuI1c] gi|311230145|gb|ADP83000.1| SNF2-related protein [Frankia sp. EuI1c] Length = 769 Score = 83.1 bits (204), Expect = 2e-14, Method: Composition-based stats. Identities = 28/158 (17%), Positives = 59/158 (37%), Gaps = 22/158 (13%) Query: 52 HDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQKAF-------------PQGRTLDK 96 H K+ L I +A N ++V F L + + ++ Sbjct: 577 HSAKLDRLVDIAREAGQNGQRVVVFSFFLEVLDIVGRRLRADPECGAVFGPITGAVAAEE 636 Query: 97 DPCTIQEWNEGKIP-LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTR 155 + ++ P +L + + G GLN+Q ++++ +Q I R+ Sbjct: 637 RQQLVDDFGRRPAPAVLLSQIVAGGTGLNMQ-AASVVILCEPQVKPTLEEQAIARL---- 691 Query: 156 QRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDL 193 + G R V V+ L+ +++D+ +++ L K D Sbjct: 692 -HRMGQIRTVQVHRLLTTDSVDQRLVEILAAKRVEFDA 728 >gi|195445442|ref|XP_002070326.1| GK12000 [Drosophila willistoni] gi|194166411|gb|EDW81312.1| GK12000 [Drosophila willistoni] Length = 1352 Score = 83.1 bits (204), Expect = 2e-14, Method: Composition-based stats. Identities = 23/106 (21%), Positives = 46/106 (43%), Gaps = 9/106 (8%) Query: 94 LDKDPCTIQEWNEG---KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 +++ +++N K L + G G+NL N +V F + W+ Q I R Sbjct: 1005 VEQREAMCKKFNNAANLKARLFLISTRAGGLGINL-VAANRVVIFDVSWNPSHDTQSIFR 1063 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + + G + ++Y LIA T+++ V +R K +++ Sbjct: 1064 V-----YRFGQIKPCYIYRLIAMGTMEQKVYERQVAKLATAKRVID 1104 >gi|242006444|ref|XP_002424060.1| conserved hypothetical protein [Pediculus humanus corporis] gi|212507366|gb|EEB11322.1| conserved hypothetical protein [Pediculus humanus corporis] Length = 1457 Score = 83.1 bits (204), Expect = 2e-14, Method: Composition-based stats. Identities = 22/113 (19%), Positives = 43/113 (38%), Gaps = 8/113 (7%) Query: 87 AFPQGRTLDKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEH 144 + ++ +N L + G GLNLQ + ++ F W+ + Sbjct: 1017 RLDGATKSEDRGELLRRFNSKDSEYFLFLLSTRAGGLGLNLQ-AADTVIIFDSDWNPHQD 1075 Query: 145 QQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 Q R + G + V V L+ N+++E +L R K + + ++ A Sbjct: 1076 LQA-----QDRAHRIGQQNEVRVLRLLTVNSVEERILAAARYKLNMDEKVIQA 1123 >gi|195504329|ref|XP_002099032.1| GE10693 [Drosophila yakuba] gi|194185133|gb|EDW98744.1| GE10693 [Drosophila yakuba] Length = 1312 Score = 83.1 bits (204), Expect = 2e-14, Method: Composition-based stats. Identities = 26/134 (19%), Positives = 53/134 (39%), Gaps = 18/134 (13%) Query: 75 YHFNSDLARLQKAFPQGRTL---------DKDPCTIQEWNEG---KIPLLFAHPASCGHG 122 Y F D+ + + G+ ++ +++N + L + G G Sbjct: 945 YEFEGDVGDFKGCWTSGKDYFRLDGSCSVEQREAMCKQFNNVTNLRARLFLISTRAGGLG 1004 Query: 123 LNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQ 182 +NL N +V F + W+ Q I R+ + G + ++Y LIA T+++ V + Sbjct: 1005 INL-VAANRVVIFDVSWNPSHDTQSIFRV-----YRFGQIKPCYIYRLIAMGTMEQKVYE 1058 Query: 183 RLRTKSTIQDLLLN 196 R K +++ Sbjct: 1059 RQVAKQATAKRVID 1072 >gi|194874444|ref|XP_001973399.1| GG13364 [Drosophila erecta] gi|190655182|gb|EDV52425.1| GG13364 [Drosophila erecta] Length = 880 Score = 83.1 bits (204), Expect = 2e-14, Method: Composition-based stats. Identities = 22/138 (15%), Positives = 48/138 (34%), Gaps = 18/138 (13%) Query: 65 KANAAPIIVAYHFNSDLARLQ----------KAFPQGRTLDKDPCTIQEWNEG--KIPLL 112 K+ +++ L L+ + G T I +N + + Sbjct: 6 KSQNHRVLIFSQMTKMLDILEDFLEGEQYKYERIDGGITGTLRQEAIDRFNAPGAQQFVF 65 Query: 113 FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIA 172 + G G+NL + ++ + W+ Q +R + G V +Y + Sbjct: 66 LLSTRAGGLGINL-ATADTVIIYDSDWNPHNDIQA-----FSRAHRIGQANKVMIYRFVT 119 Query: 173 QNTIDELVLQRLRTKSTI 190 +N+++E V Q + K + Sbjct: 120 RNSVEERVTQVAKRKMML 137 >gi|189197045|ref|XP_001934860.1| DNA repair protein rad5 [Pyrenophora tritici-repentis Pt-1C-BFP] gi|187980808|gb|EDU47434.1| DNA repair protein rad5 [Pyrenophora tritici-repentis Pt-1C-BFP] Length = 1022 Score = 83.1 bits (204), Expect = 2e-14, Method: Composition-based stats. Identities = 21/149 (14%), Positives = 52/149 (34%), Gaps = 17/149 (11%) Query: 53 DEKIKALEVIIEKANAAPIIVAYHFNSDLARLQ----------KAFPQGRTLDKDPCTIQ 102 I+ L I E ++ F S L ++ + + +D + Sbjct: 849 SRTIELLNEIRENDPTEKTLIFSQFTSLLDLVEVPLWREGIKYQRYDGSMKMDDRAEAVN 908 Query: 103 EW-NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGF 161 + + ++ + GLNL +++ +W+ +Q ++R + Sbjct: 909 LFMDNPNQNVMLVSIKAGNAGLNLWKASQVIIL-DPFWNPFIEEQAVDR-----AHRMPQ 962 Query: 162 KRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 R V V+ ++ T+++ ++ K I Sbjct: 963 TREVHVHRILVPETVEDRIVLLQDKKREI 991 >gi|24664907|ref|NP_730088.1| brahma, isoform D [Drosophila melanogaster] gi|28574896|ref|NP_536745.4| brahma, isoform C [Drosophila melanogaster] gi|23093400|gb|AAN11773.1| brahma, isoform C [Drosophila melanogaster] gi|23093401|gb|AAN11774.1| brahma, isoform D [Drosophila melanogaster] gi|33589348|gb|AAQ22441.1| RE61274p [Drosophila melanogaster] Length = 1634 Score = 83.1 bits (204), Expect = 2e-14, Method: Composition-based stats. Identities = 22/105 (20%), Positives = 45/105 (42%), Gaps = 8/105 (7%) Query: 95 DKDPCTIQEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIG 152 + ++++N + + + G GLNLQ + +V F W+ + Q Sbjct: 1147 EDRGELLRKFNAKGSDVFVFLLSTRAGGLGLNLQT-ADTVVIFDSDWNPHQDLQA----- 1200 Query: 153 VTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 R + G + V V L+ N+++E +L R K + + ++ A Sbjct: 1201 QDRAHRIGQRNEVRVLRLMTVNSVEERILAAARYKLNMDEKVIQA 1245 >gi|323450080|gb|EGB05963.1| hypothetical protein AURANDRAFT_1051 [Aureococcus anophagefferens] Length = 531 Score = 83.1 bits (204), Expect = 2e-14, Method: Composition-based stats. Identities = 32/156 (20%), Positives = 56/156 (35%), Gaps = 23/156 (14%) Query: 53 DEKIKALEVIIEKANA----APIIVAYHFNSDLARLQK---------AFPQGRTLDKDPC 99 K+ L ++ + ++V + S L + + G+T K Sbjct: 343 SGKLHVLYRLLRELRGNGGQERVVVVANQTSSLELVSRLCSREGWPWCMLDGKTPLKQRK 402 Query: 100 TIQE-WNEGKIP---LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTR 155 + + +N+ + G GLNL GG+ LV F W+ +Q R Sbjct: 403 LLNDEFNDPACEHHFCFLLSSTAGGCGLNL-IGGSRLVLFDSSWNPATDKQAAARCW--- 458 Query: 156 QRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQ 191 + G R + Y L+ TI+E + QR K + Sbjct: 459 --RDGNPRRCYTYRLLTAGTIEEKIYQRQLAKEGLA 492 >gi|240274021|gb|EER37539.1| DNA repair and recombination protein RAD5B [Ajellomyces capsulatus H143] Length = 294 Score = 83.1 bits (204), Expect = 2e-14, Method: Composition-based stats. Identities = 35/155 (22%), Positives = 62/155 (40%), Gaps = 20/155 (12%) Query: 50 EVHDEKIKALEVIIEKANAAP---IIVAYHFNSDLARLQKAFP-----------QGRTLD 95 E KI+AL I+ AP +V + S L ++ + + Sbjct: 118 ETTSSKIQALLKILTAKGQAPNTKTVVFSQWVSFLDIVEPQLVRNGITFARIDGKMSSAK 177 Query: 96 KDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTR 155 +D N+ +L A C GLNL N ++ WW Q ++R+ Sbjct: 178 RDAAMNALSNDSNCTVLLASLNVCSVGLNL-VAANQVILADSWWAPAIEDQAVDRV---- 232 Query: 156 QRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 + G KR ++ L+ +N+I++ VL + + K T+ Sbjct: 233 -YRLGQKRPTTIWRLVMENSIEDRVLDKQKEKRTL 266 >gi|83315696|ref|XP_730904.1| DNA repair protein [Plasmodium yoelii yoelii str. 17XNL] gi|23490775|gb|EAA22469.1| DNA repair protein-like-related [Plasmodium yoelii yoelii] Length = 1412 Score = 83.1 bits (204), Expect = 2e-14, Method: Composition-based stats. Identities = 37/188 (19%), Positives = 70/188 (37%), Gaps = 41/188 (21%) Query: 46 KHWKEVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQKA----------FPQGRT 93 K V+ K++ L I++ N ++V + L ++K + T Sbjct: 1203 KKDNFVYSTKLRILFDHIKEDIKNELHVVVFSQWIGFLKIIEKLLTLHEIPNKIYDGSLT 1262 Query: 94 LDKDPCTIQEWN--EGKI---------------------PLLFAHPASCGHGLNLQYGGN 130 ++ T+ +N +GKI +L + G GLNL + Sbjct: 1263 FEQRKNTLYWFNIQKGKIYQPGIGFCQSTCDIPIENKSGKVLLCSLKAGGVGLNLTVS-S 1321 Query: 131 ILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 + LWW+ Q ERI + G + V +Y + + T++E +LQ ++K Sbjct: 1322 KVYLMDLWWNPAIEDQAFERI-----HRIGQLKDVNIYKFVLEKTVEERILQIHQSKQYT 1376 Query: 191 QDLLLNAL 198 + L + Sbjct: 1377 ANQCLAQV 1384 >gi|31745178|ref|NP_853634.1| transcription activator BRG1 [Danio rerio] gi|30385206|gb|AAP22968.1| brahma protein-like protein 1 [Danio rerio] gi|30385209|gb|AAP22969.1| brahma protein-like protein 1 [Danio rerio] gi|190340088|gb|AAI63918.1| SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4 [Danio rerio] gi|190340090|gb|AAI63920.1| SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4 [Danio rerio] Length = 1627 Score = 83.1 bits (204), Expect = 2e-14, Method: Composition-based stats. Identities = 28/160 (17%), Positives = 62/160 (38%), Gaps = 20/160 (12%) Query: 52 HDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAF---------PQGRTLDKDPCT 100 K + L+ I+ +A +++ + + ++ F G T +D Sbjct: 1090 ASGKFELLDRILPKLRATNHKVLLFCQMTTLMTIMEDYFAYRNFKYLRLDGTTKAEDRGM 1149 Query: 101 I-QEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 + + +N+ + + + G GLNLQ + ++ F W+ + Q R Sbjct: 1150 LLKNFNDPSHQYFIFLLSTRAGGLGLNLQ-SADTVIIFDSDWNPHQDLQA-----QDRAH 1203 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + G + V V L N+++E +L + K + ++ A Sbjct: 1204 RIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQA 1243 >gi|253744877|gb|EET01014.1| Transcription regulatory protein SNF2 [Giardia intestinalis ATCC 50581] Length = 2074 Score = 83.1 bits (204), Expect = 2e-14, Method: Composition-based stats. Identities = 32/159 (20%), Positives = 63/159 (39%), Gaps = 20/159 (12%) Query: 53 DEKIKALEVIIEKANA--APIIVAYHFN-------SDLARLQKAFP--QGRTLDKDP-CT 100 K++ L+ I+ K + +++ F S L Q F G D D Sbjct: 1101 SGKLELLDNILAKLHKTSHRVLIFSQFKKVLDVLSSYLHYRQYKFVRFDGSVKDVDRNTM 1160 Query: 101 IQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQ 158 I+ +N+ + + HGLNLQ + ++ F ++ QQ +R + Sbjct: 1161 IRGYNKEDSKDFIFLLSTRAASHGLNLQT-ADTVIIFDCDYNGTYDQQAQDRC-----YR 1214 Query: 159 AGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 G V V+ L + I+ +L +K ++ ++++A Sbjct: 1215 LGQVNPVKVFKLYSNTAIESKMLSVATSKLSLATIVMDA 1253 >gi|308161598|gb|EFO64037.1| Transcription regulatory protein SNF2 [Giardia lamblia P15] Length = 2076 Score = 83.1 bits (204), Expect = 2e-14, Method: Composition-based stats. Identities = 31/159 (19%), Positives = 63/159 (39%), Gaps = 20/159 (12%) Query: 53 DEKIKALEVIIEKANA--APIIVAYHFN-------SDLARLQKAFP--QGRTLDKDP-CT 100 K++ L+ I+ K + +++ F S L + F G D D Sbjct: 1090 SGKLELLDNILAKLHKTSHRVLIFSQFKKVLDVLSSYLHYRRYNFVRFDGSVKDVDRNSM 1149 Query: 101 IQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQ 158 I+ +N+ + + HGLNLQ + ++ F ++ QQ +R + Sbjct: 1150 IRGYNKEDSKDFVFLLSTRAASHGLNLQT-ADTVIIFDCDYNGTYDQQAQDRC-----YR 1203 Query: 159 AGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 G V V+ L + I+ +L +K ++ ++++A Sbjct: 1204 LGQVNPVKVFKLYSNTAIESKMLSVATSKLSLATIVMDA 1242 >gi|194749805|ref|XP_001957327.1| GF10366 [Drosophila ananassae] gi|190624609|gb|EDV40133.1| GF10366 [Drosophila ananassae] Length = 1635 Score = 83.1 bits (204), Expect = 2e-14, Method: Composition-based stats. Identities = 30/159 (18%), Positives = 61/159 (38%), Gaps = 20/159 (12%) Query: 53 DEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQ---------KAFPQGRTLDKDPCTI 101 K + L+ I+ K A +++ + ++ G T +D + Sbjct: 1093 SGKFELLDRILPKLKATNHRVLLFCQMTQCMTIIEDYLGWRQFGYLRLDGTTKAEDRGDL 1152 Query: 102 -QEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQ 158 +++N + + G GLNLQ + +V F W+ + Q R + Sbjct: 1153 LRKFNAKDSDYFVFLLSTRAGGLGLNLQT-ADTVVIFDSDWNPHQDLQA-----QDRAHR 1206 Query: 159 AGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 G + V V L+ N+++E +L R K + + ++ A Sbjct: 1207 IGQRNEVRVLRLMTVNSVEERILAAARYKLNMDEKVIQA 1245 >gi|115438138|ref|XP_001217989.1| conserved hypothetical protein [Aspergillus terreus NIH2624] gi|114188804|gb|EAU30504.1| conserved hypothetical protein [Aspergillus terreus NIH2624] Length = 948 Score = 83.1 bits (204), Expect = 2e-14, Method: Composition-based stats. Identities = 37/165 (22%), Positives = 65/165 (39%), Gaps = 24/165 (14%) Query: 52 HDEKIKALEVIIEK---ANAAPIIVAYHFNSDLARLQKAFPQGRT-----------LDKD 97 KI+AL I+ A +V + S L L+ + + +D Sbjct: 774 PSSKIEALVKILTAQGQAPGTKTVVFSQWTSFLNLLEPHLHRVGIGFARIDGKMNSVARD 833 Query: 98 PCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 T + + + +L A + C GLNL N + WW Q ++R+ Sbjct: 834 NSTYRFSRDPQCTVLLASLSVCSVGLNL-VAANQAILADSWWAPAIEDQAVDRV-----Y 887 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKET 202 + G KR V+ L+ +++I++ VL K L++A +ET Sbjct: 888 RLGQKRETTVWRLVMEDSIEDRVLAIQDVKR----QLMSAAFRET 928 >gi|157823928|ref|NP_001099948.1| helicase-like transcription factor [Rattus norvegicus] gi|149048534|gb|EDM01075.1| SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 3 (predicted) [Rattus norvegicus] Length = 974 Score = 83.1 bits (204), Expect = 2e-14, Method: Composition-based stats. Identities = 32/181 (17%), Positives = 62/181 (34%), Gaps = 23/181 (12%) Query: 39 AVYYDEEKHWKEVHDEKIKALEV-IIEKANAAP---IIVAYHFNSDLARLQKAFPQGRTL 94 A D + + KI AL +IE P +V F + L+ ++ + Sbjct: 783 ACDSDNKSDMEWTSSSKINALMNALIELRTKDPNIKSLVVSQFTTFLSLIETPLKASGFV 842 Query: 95 ----------DKDPCTIQEWNE---GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDL 141 K +IQ + G ++ + G GLNL + + W+ Sbjct: 843 FTRLDGSMAQKKRVESIQCFQNTDAGSPTIMLLSLKAGGVGLNL-CAASRVFLMDPAWNP 901 Query: 142 EEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 Q +R + G K+ V + I +++++E +L+ K + K + Sbjct: 902 AAEDQCFDRC-----HRLGQKQEVIITKFIVKDSVEENMLKIQNMKRELAAGAFGTKKTD 956 Query: 202 T 202 Sbjct: 957 A 957 >gi|322706469|gb|EFY98049.1| DNA repair protein RAD16 [Metarhizium anisopliae ARSEF 23] Length = 1086 Score = 83.1 bits (204), Expect = 2e-14, Method: Composition-based stats. Identities = 25/150 (16%), Positives = 49/150 (32%), Gaps = 17/150 (11%) Query: 59 LEVIIEKANAAPIIVAYHFNSDLA----RLQKAFPQGRTLDKDPCTIQEW-------NEG 107 L + + I+ F + L RL++A LD Q N Sbjct: 923 LHKLRSDNASHKSIIFSQFTTMLQLIEWRLRRAGITTVMLDGSMTPAQRQASIEHFMNNV 982 Query: 108 KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFV 167 + + G LNL + + WW+ Q +R + G R + Sbjct: 983 DVECFLVSLKAGGVALNLTEASRVFI-VDPWWNPAAEWQSADRC-----HRIGQTRPCTI 1036 Query: 168 YYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 L +++++ ++ K+ + +NA Sbjct: 1037 TRLCIEDSVESRMVLIQEKKTNMIHSTVNA 1066 >gi|195155527|ref|XP_002018655.1| GL25835 [Drosophila persimilis] gi|194114808|gb|EDW36851.1| GL25835 [Drosophila persimilis] Length = 1332 Score = 83.1 bits (204), Expect = 2e-14, Method: Composition-based stats. Identities = 23/150 (15%), Positives = 54/150 (36%), Gaps = 18/150 (12%) Query: 65 KANAAPIIVAYHFNSDLARLQKAF---------PQGRTL-DKDPCTIQEWNEG--KIPLL 112 KAN +++ L L+ GR + I +++ + Sbjct: 12 KANGHRVLIFSQMVRCLDILEDYLVYRKYPFERIDGRIRGNLRQEAIDRYSKPGSDRFVF 71 Query: 113 FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIA 172 + G G+NL + ++ + W+ + Q R + G ++ V +Y L+ Sbjct: 72 LLCTKAGGLGINLT-AADTVIIYDSDWNPQNDLQAQARC-----HRIGQRKMVKIYRLLC 125 Query: 173 QNTIDELVLQRLRTKSTIQDLLLNALKKET 202 +NT + + + K + +L ++ + Sbjct: 126 RNTYEREMFDKASMKLGLDKAVLQSMNTQG 155 >gi|74209142|dbj|BAE24963.1| unnamed protein product [Mus musculus] Length = 1733 Score = 83.1 bits (204), Expect = 2e-14, Method: Composition-based stats. Identities = 25/149 (16%), Positives = 52/149 (34%), Gaps = 18/149 (12%) Query: 66 ANAAPIIVAYHFNSDLARLQKAFPQGR-TLDK---------DPCTIQEWNEGKIP--LLF 113 A +++ L L+ Q R T ++ I + + + Sbjct: 795 AGGHKVLIFSQMVRCLDILEDYLIQRRYTYERIDGRVRGNLRQAAIDRFCKPDSDRFVFL 854 Query: 114 AHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQ 173 + G G+NL + + F W+ + Q R + G +AV VY LI + Sbjct: 855 LCTRAGGLGINLT-AADTCIIFDSDWNPQNDLQAQARC-----HRIGQSKAVKVYRLITR 908 Query: 174 NTIDELVLQRLRTKSTIQDLLLNALKKET 202 N+ + + + K + +L + ++ Sbjct: 909 NSYEREMFDKASLKLGLDKAILQDINRKG 937 >gi|46123053|ref|XP_386080.1| hypothetical protein FG05904.1 [Gibberella zeae PH-1] gi|116090833|gb|ABJ55998.1| RING-11 protein [Gibberella zeae] Length = 1063 Score = 83.1 bits (204), Expect = 2e-14, Method: Composition-based stats. Identities = 25/150 (16%), Positives = 49/150 (32%), Gaps = 17/150 (11%) Query: 59 LEVIIEKANAAPIIVAYHFNSDLA----RLQKAFPQGRTLDKDPCTIQEW-------NEG 107 L + + I+ F + L RL++A LD Q N Sbjct: 900 LHKLRSDNASHKSIIFSQFTTMLQLIEWRLRRAGITTVMLDGSMTPAQRQASIEHFMNNV 959 Query: 108 KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFV 167 + + G LNL + + WW+ Q +R + G R + Sbjct: 960 DVECFLVSLKAGGVALNLTEASRVFI-VDPWWNPAAEWQSADRC-----HRIGQTRPCTI 1013 Query: 168 YYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 L +++++ ++ K+ + +NA Sbjct: 1014 TRLCIEDSVESRMVLIQEKKTNMIHSTVNA 1043 >gi|332007781|gb|AED95164.1| chromatin remodeling 4 protein [Arabidopsis thaliana] Length = 2223 Score = 83.1 bits (204), Expect = 2e-14, Method: Composition-based stats. Identities = 24/160 (15%), Positives = 59/160 (36%), Gaps = 21/160 (13%) Query: 52 HDEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQ------------KAFPQGRTLDKD 97 K+ L +++ + +++ L L+ + + Sbjct: 1002 ASAKLTLLHSMLKVLHKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTFERVDGSVAVADR 1061 Query: 98 PCTIQEWNEGKIP-LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 I +N+ K + +CG G+NL + ++ + ++ Q + R Sbjct: 1062 QAAIARFNQDKNRFVFLLSTRACGLGINL-ATADTVIIYDSDFNPHADIQAMNR-----A 1115 Query: 157 RQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + G + + VY L+ + +++E +LQ + K + L +N Sbjct: 1116 HRIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFVN 1155 >gi|322696102|gb|EFY87899.1| DNA repair protein RAD16 [Metarhizium acridum CQMa 102] Length = 1097 Score = 83.1 bits (204), Expect = 2e-14, Method: Composition-based stats. Identities = 25/150 (16%), Positives = 53/150 (35%), Gaps = 17/150 (11%) Query: 59 LEVIIEKANAAPIIVAYHFNSDLA----RLQKAFPQGRTLD------KDPCTIQEW-NEG 107 L + + I+ F + L RL++A LD + +I+ + N Sbjct: 934 LHKLRSDNASHKSIIFSQFTTMLQLIEWRLRRAGITTVMLDGSMTPSQRQASIEHFMNNV 993 Query: 108 KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFV 167 + + G LNL + + WW+ Q +R + G R + Sbjct: 994 DVECFLVSLKAGGVALNLTEASRVFI-VDPWWNPAAEWQSADRC-----HRIGQTRPCTI 1047 Query: 168 YYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 L +++++ ++ K+ + +NA Sbjct: 1048 TRLCIEDSVESRMVLIQEKKTNMIHSTVNA 1077 >gi|189198105|ref|XP_001935390.1| DNA repair protein rad5 [Pyrenophora tritici-repentis Pt-1C-BFP] gi|187981338|gb|EDU47964.1| DNA repair protein rad5 [Pyrenophora tritici-repentis Pt-1C-BFP] Length = 1116 Score = 83.1 bits (204), Expect = 2e-14, Method: Composition-based stats. Identities = 32/173 (18%), Positives = 63/173 (36%), Gaps = 31/173 (17%) Query: 51 VHDEKIKALEVIIEK--------ANAAPI--IVAYHFNSDLARLQKAFPQG--------- 91 K KAL +E+ + PI IV + + L ++ A Sbjct: 934 GPHTKTKALLDDLEEFRNWSDQHPDERPIKSIVFSSWTTHLDLIEIALKNAGHTLVRLDG 993 Query: 92 ----RTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQM 147 DK ++E + I ++ + G GLNL N + ++ Q Sbjct: 994 RMTRENRDKSMQALRE--DPSIRVMLVSIGAGGLGLNLTT-ANKVFMMEPQFNPAAEAQA 1050 Query: 148 IERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKK 200 ++R+ + G R V + I + + +E +L+ K + D+ ++ +K Sbjct: 1051 VDRV-----HRLGQDREVTIKRFIMEGSFEEKMLELQNKKRDLADMTMSKERK 1098 >gi|145358870|ref|NP_199293.2| CHR4 (CHROMATIN REMODELING 4); ATP binding / DNA binding / chromatin binding / helicase/ nucleic acid binding / protein binding / zinc ion binding [Arabidopsis thaliana] Length = 2242 Score = 83.1 bits (204), Expect = 2e-14, Method: Composition-based stats. Identities = 24/160 (15%), Positives = 59/160 (36%), Gaps = 21/160 (13%) Query: 52 HDEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQ------------KAFPQGRTLDKD 97 K+ L +++ + +++ L L+ + + Sbjct: 1002 ASAKLTLLHSMLKVLHKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTFERVDGSVAVADR 1061 Query: 98 PCTIQEWNEGKIP-LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 I +N+ K + +CG G+NL + ++ + ++ Q + R Sbjct: 1062 QAAIARFNQDKNRFVFLLSTRACGLGINL-ATADTVIIYDSDFNPHADIQAMNR-----A 1115 Query: 157 RQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + G + + VY L+ + +++E +LQ + K + L +N Sbjct: 1116 HRIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFVN 1155 >gi|2660669|gb|AAC79140.1| human Mi-2 autoantigen-like protein [Arabidopsis thaliana] gi|9758384|dbj|BAB08833.1| helicase-like protein [Arabidopsis thaliana] Length = 2228 Score = 83.1 bits (204), Expect = 2e-14, Method: Composition-based stats. Identities = 24/160 (15%), Positives = 59/160 (36%), Gaps = 21/160 (13%) Query: 52 HDEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQ------------KAFPQGRTLDKD 97 K+ L +++ + +++ L L+ + + Sbjct: 988 ASAKLTLLHSMLKVLHKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTFERVDGSVAVADR 1047 Query: 98 PCTIQEWNEGKIP-LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 I +N+ K + +CG G+NL + ++ + ++ Q + R Sbjct: 1048 QAAIARFNQDKNRFVFLLSTRACGLGINL-ATADTVIIYDSDFNPHADIQAMNR-----A 1101 Query: 157 RQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + G + + VY L+ + +++E +LQ + K + L +N Sbjct: 1102 HRIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFVN 1141 >gi|302307173|ref|NP_983750.2| ADL345Cp [Ashbya gossypii ATCC 10895] gi|299788872|gb|AAS51574.2| ADL345Cp [Ashbya gossypii ATCC 10895] Length = 746 Score = 83.1 bits (204), Expect = 2e-14, Method: Composition-based stats. Identities = 26/161 (16%), Positives = 55/161 (34%), Gaps = 23/161 (14%) Query: 45 EKHWKEVHDEKIKALEV----IIEKANAAPIIVAYHFNSDLARLQKAFPQGR-------- 92 + +W+ KI+AL + IV F S L ++ + Sbjct: 568 QGNWR--SSTKIEALLEELYNLRSSTRTIKSIVFSQFTSMLDLVEWRLKRAGFQTAKLQG 625 Query: 93 --TLDKDPCTIQEWNEG-KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIE 149 T + TI + + + + G LNL + + WW+ Q + Sbjct: 626 SMTPTQRAETINYFMDNVHCEVFLVSLKAGGVALNLCEASQVFIL-DPWWNPSVEWQSGD 684 Query: 150 RIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 R+ + G R V + +++I+ +++ K+ + Sbjct: 685 RV-----HRIGQHRPVKITRFCIEDSIESRIIELQEKKANM 720 >gi|17862980|gb|AAL39967.1| SD07188p [Drosophila melanogaster] Length = 655 Score = 83.1 bits (204), Expect = 2e-14, Method: Composition-based stats. Identities = 26/134 (19%), Positives = 53/134 (39%), Gaps = 18/134 (13%) Query: 75 YHFNSDLARLQKAFPQGRTL---------DKDPCTIQEWNE---GKIPLLFAHPASCGHG 122 Y F D+ + + G+ ++ +++N + L + G G Sbjct: 288 YEFEGDVGDFKGCWTSGKDYFRLDGSCSVEQREAMCKQFNNITNLRARLFLISTRAGGLG 347 Query: 123 LNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQ 182 +NL N +V F + W+ Q I R+ + G + ++Y LIA T+++ V + Sbjct: 348 INL-VAANRVVIFDVSWNPSHDTQSIFRV-----YRFGQIKPCYIYRLIAMGTMEQKVYE 401 Query: 183 RLRTKSTIQDLLLN 196 R K +++ Sbjct: 402 RQVAKQATAKRVID 415 >gi|12224998|emb|CAC21685.1| hypothetical protein [Homo sapiens] Length = 375 Score = 83.1 bits (204), Expect = 2e-14, Method: Composition-based stats. Identities = 30/157 (19%), Positives = 62/157 (39%), Gaps = 19/157 (12%) Query: 51 VHDEKIKALEVIIEKAN--AAPIIVAYHFNSDLARL---------QKAFPQGRT-LDKDP 98 + K + L I+ + +++ F L L + G+T + + Sbjct: 200 LDSGKFRVLGCILSELKQKGDRVVLFSQFTMMLDILEVLLKHHQHRYLRLDGKTQISERI 259 Query: 99 CTIQEWNEG-KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 I E+N I + + G G+NL N+++ + + +Q +R Sbjct: 260 HLIDEFNTDMDIFVFLLSTKAGGLGINLT-SANVVILHDIDCNPYNDKQAEDRC-----H 313 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 + G + V V LI+Q TI+E +L+ + K ++ + Sbjct: 314 RVGQTKEVLVIKLISQGTIEESMLKINQQKLKLEQDM 350 >gi|317037064|ref|XP_001398334.2| hypothetical protein ANI_1_444154 [Aspergillus niger CBS 513.88] Length = 858 Score = 83.1 bits (204), Expect = 2e-14, Method: Composition-based stats. Identities = 28/158 (17%), Positives = 63/158 (39%), Gaps = 20/158 (12%) Query: 53 DEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQKAFPQG-----------RTLDKDPC 99 + + L II ++ ++V H L ++ + + Sbjct: 452 SCRAEILNRIIAESVRAGDKVLVFSHSIPTLNYVENDILKAFGWKYCRLDGSTPMASRQA 511 Query: 100 TIQEWNEGKI-PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQ 158 +++N+G + + G GLN+ +G N ++ F ++ +Q + R + Sbjct: 512 ATKQFNQGSAEDVYLISTRAGGLGLNI-FGANRVIIFDFTFNPVWEEQAVGR-----AYR 565 Query: 159 AGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 G K+ VFVY IA T +E++ + K+ + +++ Sbjct: 566 LGQKKPVFVYRFIAGGTFEEVMYNKAVFKTQLAFRVVD 603 >gi|207341053|gb|EDZ69217.1| YOR191Wp-like protein [Saccharomyces cerevisiae AWRI1631] Length = 1205 Score = 83.1 bits (204), Expect = 2e-14, Method: Composition-based stats. Identities = 22/156 (14%), Positives = 63/156 (40%), Gaps = 18/156 (11%) Query: 56 IKALEVIIEKANAAPIIVAYHFNSDLARLQK------AFPQGRTLD-----KDPCTIQEW 104 I+ ++ + +++ II+ F + L+ FP + + + I E+ Sbjct: 1035 IQVIQRVFDESATEKIIIFSQFTTFFEILEHFLKNKLNFPYLKYIGSMNAQRRSDVINEF 1094 Query: 105 N-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKR 163 + + +L + GL L ++++ +W+ +Q +R + + Sbjct: 1095 YRDPEKRILLISMKAGNSGLTLTCANHVVI-VDPFWNPYVEEQAQDRC-----YRISQTK 1148 Query: 164 AVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 V V+ L ++++++ + + + K + D ++ K Sbjct: 1149 KVQVHKLFIKDSVEDRISELQKRKKEMVDSAMDPGK 1184 >gi|301606634|ref|XP_002932929.1| PREDICTED: chromodomain-helicase-DNA-binding protein 6-like [Xenopus (Silurana) tropicalis] Length = 2522 Score = 83.1 bits (204), Expect = 2e-14, Method: Composition-based stats. Identities = 25/147 (17%), Positives = 49/147 (33%), Gaps = 9/147 (6%) Query: 59 LEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTL-DKDPCTIQEWNEGKIP--LLFAH 115 LE + + Y L GR + I + + + Sbjct: 650 LEEFGDLKTEEQVRKFYWLFDFLWIYIYERIDGRVRGNLRQAAIDRFCKPDSDRFVFLLC 709 Query: 116 PASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNT 175 + G G+NL + + F W+ + Q R + G +AV VY LI +N+ Sbjct: 710 TRAGGLGINLT-AADTCIIFDSDWNPQNDLQAQARC-----HRIGQSKAVKVYRLITRNS 763 Query: 176 IDELVLQRLRTKSTIQDLLLNALKKET 202 + + + K + +L + ++ Sbjct: 764 YEREMFDKASLKLGLDKAVLQDINRKG 790 >gi|302422820|ref|XP_003009240.1| transcription termination factor 2 [Verticillium albo-atrum VaMs.102] gi|261352386|gb|EEY14814.1| transcription termination factor 2 [Verticillium albo-atrum VaMs.102] Length = 924 Score = 83.1 bits (204), Expect = 2e-14, Method: Composition-based stats. Identities = 29/153 (18%), Positives = 60/153 (39%), Gaps = 17/153 (11%) Query: 43 DEEKHWKEVH--DEKIKALEVIIEKANAAP---IIVAYHFNSDLARLQKAFPQGRTLDKD 97 D++ + + K +AL I++ P +++ + S L +Q + Sbjct: 754 DDDANAFDGDFKSSKTEALLKIVQATCKDPQSKVVIFSQWTSFLNIIQTQIEEAGLKWTR 813 Query: 98 PCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 + ++ + + GLNL + ++ WW Q ++R+ Sbjct: 814 IDGSMKPDKRDAAI------AALVGLNL-VAADTVILADSWWAPAIEDQAVDRV-----H 861 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 + G KR V+ L+ +NTI+E VL+ K + Sbjct: 862 RLGQKRPTTVWRLVMENTIEEQVLEIQAAKRQL 894 >gi|225562673|gb|EEH10952.1| CHR9/SNF2/SWI2 [Ajellomyces capsulatus G186AR] Length = 1032 Score = 83.1 bits (204), Expect = 2e-14, Method: Composition-based stats. Identities = 28/138 (20%), Positives = 47/138 (34%), Gaps = 17/138 (12%) Query: 66 ANAAPIIVAYHFNSDLARLQKAFP----------QGRTLDKDPCTIQEWNEG-KIPLLFA 114 N ++V H L LQ F + + + +N + + Sbjct: 629 GNGDKVLVFSHSVRLLKMLQMLFKHTSYNVSYLDGAMSYEDRAKVVDHFNADIREFVFLI 688 Query: 115 HPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQN 174 + G GLN+ N +V W+ Q R + G R V V+ L++ Sbjct: 689 STRAGGVGLNIT-SANKVVVVDPNWNPAYDLQA-----QDRAYRIGQARDVEVFRLVSAG 742 Query: 175 TIDELVLQRLRTKSTIQD 192 TI+E+V R K + Sbjct: 743 TIEEIVYARQIYKQQQAN 760 >gi|297826111|ref|XP_002880938.1| hypothetical protein ARALYDRAFT_481680 [Arabidopsis lyrata subsp. lyrata] gi|297326777|gb|EFH57197.1| hypothetical protein ARALYDRAFT_481680 [Arabidopsis lyrata subsp. lyrata] Length = 3451 Score = 83.1 bits (204), Expect = 2e-14, Method: Composition-based stats. Identities = 29/157 (18%), Positives = 57/157 (36%), Gaps = 20/157 (12%) Query: 55 KIKALEVIIEK--ANAAPIIVAYHFNSDLARL---------QKAFPQGRTLDKDPCT-IQ 102 K++ L+ ++ K A ++ L + + G+T D I Sbjct: 1070 KLEMLDRMLPKLKATDHRVLFFSTMTRLLDVMEDYLTLKGYKYLRLDGQTSGGDRGALID 1129 Query: 103 EWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 +N+ P + + G G+NLQ + ++ F W+ + Q R + G Sbjct: 1130 GFNKSGSPYFIFLLSIRAGGVGVNLQ-AADTVILFDTDWNPQVDLQAQAR-----AHRIG 1183 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 K+ V V N+++E V K + + + A Sbjct: 1184 QKKDVLVLRFETVNSVEEQVRASAEHKLGVANQSITA 1220 >gi|30683833|ref|NP_850117.1| SYD (SPLAYED); ATPase/ chromatin binding [Arabidopsis thaliana] gi|330253005|gb|AEC08099.1| ATPase splayed [Arabidopsis thaliana] Length = 3529 Score = 83.1 bits (204), Expect = 2e-14, Method: Composition-based stats. Identities = 29/157 (18%), Positives = 57/157 (36%), Gaps = 20/157 (12%) Query: 55 KIKALEVIIEK--ANAAPIIVAYHFNSDLARL---------QKAFPQGRTLDKDPCT-IQ 102 K++ L+ ++ K A ++ L + + G+T D I Sbjct: 1074 KLEMLDRMLPKLKATDHRVLFFSTMTRLLDVMEDYLTLKGYKYLRLDGQTSGGDRGALID 1133 Query: 103 EWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 +N+ P + + G G+NLQ + ++ F W+ + Q R + G Sbjct: 1134 GFNKSGSPFFIFLLSIRAGGVGVNLQ-AADTVILFDTDWNPQVDLQAQAR-----AHRIG 1187 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 K+ V V N+++E V K + + + A Sbjct: 1188 QKKDVLVLRFETVNSVEEQVRASAEHKLGVANQSITA 1224 >gi|10434055|dbj|BAB14112.1| unnamed protein product [Homo sapiens] Length = 730 Score = 83.1 bits (204), Expect = 2e-14, Method: Composition-based stats. Identities = 25/146 (17%), Positives = 51/146 (34%), Gaps = 18/146 (12%) Query: 65 KANAAPIIVAYHFNSDLARLQKAFPQGRTL----------DKDPCTIQEWNEGKIP--LL 112 KA +++ L L+ R L + I +++ + Sbjct: 309 KAGGHKVLIFSQMVRCLDILEDYLIHKRYLYERIDGRVRGNLRQAAIDRFSKPDSDRFVF 368 Query: 113 FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIA 172 + G G+NL + + F W+ + Q R + G +AV VY L+ Sbjct: 369 LLCTRAGGLGINLT-AADTCIIFDSDWNPQNDLQAQARC-----HRIGQNKAVKVYRLVT 422 Query: 173 QNTIDELVLQRLRTKSTIQDLLLNAL 198 +N+ + + R K + +L ++ Sbjct: 423 RNSYEREMFDRASLKLGLDKAVLQSM 448 >gi|326468582|gb|EGD92591.1| hypothetical protein TESG_00164 [Trichophyton tonsurans CBS 112818] Length = 1811 Score = 83.1 bits (204), Expect = 2e-14, Method: Composition-based stats. Identities = 26/157 (16%), Positives = 62/157 (39%), Gaps = 18/157 (11%) Query: 52 HDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARL---------QKAFPQGRT-LDKDPC 99 + + + + II+++ I++ + L+ L + G+T + Sbjct: 1283 NSHRTQMVGQIIDESIKAGDKILIFSGYLHTLSYLGSMLEARGHKYCRLDGKTPIATRQA 1342 Query: 100 TIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQA 159 +++ + + + + GLN+ G N ++ F ++ +Q I R + Sbjct: 1343 ATRDFRDSDVHVYLISTKAGALGLNI-IGANRVIIFESEYNPTWEEQAIGR-----AYRL 1396 Query: 160 GFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 G + VFVY I T +EL+ ++ K + ++ Sbjct: 1397 GQTKDVFVYRFIMGGTFEELIHEKGVFKKNMALRAID 1433 >gi|219128668|ref|XP_002184529.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1] gi|217403979|gb|EEC43928.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1] Length = 479 Score = 83.1 bits (204), Expect = 2e-14, Method: Composition-based stats. Identities = 29/171 (16%), Positives = 58/171 (33%), Gaps = 20/171 (11%) Query: 40 VYYDEEKHWKEVHDEKIKALEVIIEKA--NAAPIIVAYHF---------NSDLARLQKAF 88 + + K+ +E +++K ++V L R + Sbjct: 312 ILNEAAAKQLVKSSGKMVLMEKLLQKLFDGGHKVLVFSQMVRVLDLLEELLKLKRYKYER 371 Query: 89 PQGRTLDKDP-CTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQ 145 G T + +N ++ + G GLNL +I++ F W+ + Sbjct: 372 LDGSTTSSARLSAVDRFNRKSCQRFVMLLSTRAGGLGLNLT-AADIVIIFDSDWNPQNDL 430 Query: 146 QMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 Q + R + G RAV VY L+ T + + K ++ +L+ Sbjct: 431 QAMAR-----AHRIGQTRAVRVYRLLTAKTYEMHMFHSASLKLGLERAVLS 476 >gi|172041028|ref|YP_001800742.1| hypothetical protein cur_1348 [Corynebacterium urealyticum DSM 7109] gi|171852332|emb|CAQ05308.1| hypothetical protein cu1348 [Corynebacterium urealyticum DSM 7109] Length = 343 Score = 83.1 bits (204), Expect = 2e-14, Method: Composition-based stats. Identities = 33/196 (16%), Positives = 68/196 (34%), Gaps = 25/196 (12%) Query: 8 QRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVII-EKA 66 + E + + E +N A + +Q+ K++ ++ + Sbjct: 119 ETEEWIEAFEAEREKYNEAVEAGNFMQMRQSFSGPG---------SAKMERFAELLTDGL 169 Query: 67 NAAPIIVAYHFNSDLARLQKAFPQ--------GRTLDKDPCTIQEWNEGKI-PLLFAHPA 117 + IV +F L L + G + + + ++ + +L A Sbjct: 170 DDDKTIVFTYFRGVLDHLMDSLGDRAFGPIAGGVSHQERQQAVDDFTAAEPGAVLVAQIN 229 Query: 118 SCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 + G GLN+Q N +V + Q I R + G V V+ L+ ++++ Sbjct: 230 AAGEGLNIQ-AANHVVLIEPQLNPAVEAQAIAR-----AHRMGQINPVEVHRLLTPDSVE 283 Query: 178 ELVLQRLRTKSTIQDL 193 E + L TK + D Sbjct: 284 ERLHLLLATKRELFDS 299 >gi|255561985|ref|XP_002522001.1| conserved hypothetical protein [Ricinus communis] gi|223538805|gb|EEF40405.1| conserved hypothetical protein [Ricinus communis] Length = 1447 Score = 83.1 bits (204), Expect = 2e-14, Method: Composition-based stats. Identities = 32/188 (17%), Positives = 69/188 (36%), Gaps = 36/188 (19%) Query: 44 EEKHWKEVHDEKIKALEVIIEKAN--AAPIIVAYHFNSDLA-------RLQKAFPQGRTL 94 E + + + K+ L I+ ++ +V L RL + +G+ Sbjct: 1056 ENNYKELDYSGKMVLLLDILTASSHVGDKALVFSQSIPTLDLIELYLSRLSRHGKKGKLW 1115 Query: 95 DK---------------DPCTIQEWNEGK---IPLLFAHPASCGHGLNLQYGGNILVFFS 136 K ++++N+ + + + G+NL + N +V Sbjct: 1116 RKGKDWYRLDGRTESSERQRLVEKFNDPENKRVKCTLISTRAGSLGINL-HAANRVVIVD 1174 Query: 137 LWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 W+ Q I R + G + VF Y L+A T++E + +R TK + +++ Sbjct: 1175 GSWNPTYDLQAI-----FRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVD 1229 Query: 197 ALKKETIH 204 ++ +H Sbjct: 1230 ---RQQVH 1234 >gi|312086053|ref|XP_003144925.1| hypothetical protein LOAG_09349 [Loa loa] gi|307759908|gb|EFO19142.1| hypothetical protein LOAG_09349 [Loa loa] Length = 223 Score = 83.1 bits (204), Expect = 2e-14, Method: Composition-based stats. Identities = 25/76 (32%), Positives = 38/76 (50%), Gaps = 6/76 (7%) Query: 115 HPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQN 174 A+ G GLNL G + ++ F W+ Q++ RI + G K +Y LI Sbjct: 2 SSATGGLGLNL-VGASRMILFDSDWNPAVDMQVMARIW-----RQGQKSPCHIYRLITGG 55 Query: 175 TIDELVLQRLRTKSTI 190 T+DE +LQR KS++ Sbjct: 56 TVDEKILQRQIKKSSL 71 >gi|307214999|gb|EFN89841.1| ATP-dependent helicase brm [Harpegnathos saltator] Length = 1322 Score = 83.1 bits (204), Expect = 2e-14, Method: Composition-based stats. Identities = 26/116 (22%), Positives = 49/116 (42%), Gaps = 9/116 (7%) Query: 85 QKAFPQGRTLDKDPCTI-QEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDL 141 G T +D + +++N+ + L + G GLNLQ + ++ F W+ Sbjct: 870 MYLRLDGTTKAEDRGDLLKKFNDPGSEYFLFLLSTRAGGLGLNLQ-AADTVIIFDSDWNP 928 Query: 142 EEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + Q R + G K V V L+ N+++E +L R K + + ++ A Sbjct: 929 HQDLQA-----QDRAHRIGQKNEVRVLRLMTVNSVEERILAAARYKLNMDEKVIQA 979 >gi|315042548|ref|XP_003170650.1| helicase swr1 [Arthroderma gypseum CBS 118893] gi|311344439|gb|EFR03642.1| helicase swr1 [Arthroderma gypseum CBS 118893] Length = 648 Score = 83.1 bits (204), Expect = 2e-14, Method: Composition-based stats. Identities = 35/163 (21%), Positives = 67/163 (41%), Gaps = 21/163 (12%) Query: 45 EKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFP---------QGRT 93 K W ++ K++ L +++K A I+V F + L++ G+T Sbjct: 455 NKEW--MNSGKVEKLCELLDKYIAEGDRILVFSQFTMVMDILEQVLETQKIKFFRLDGKT 512 Query: 94 LDKDPCTI-QEWNEG-KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERI 151 +D +I ++E I + + G G+NL N ++ F ++ +E Q Sbjct: 513 SVEDRQSILDAFHEQVDISVFMLSTKAGGAGINL-ACANKVIIFDSSFNPQEDIQA---- 567 Query: 152 GVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 R + G R V V L+ + TI+E + +TK + + Sbjct: 568 -ENRAHRVGQTREVEVVRLVTRGTIEEQIHALGQTKLALDQRV 609 >gi|196012568|ref|XP_002116146.1| hypothetical protein TRIADDRAFT_30634 [Trichoplax adhaerens] gi|190581101|gb|EDV21179.1| hypothetical protein TRIADDRAFT_30634 [Trichoplax adhaerens] Length = 701 Score = 83.1 bits (204), Expect = 2e-14, Method: Composition-based stats. Identities = 35/190 (18%), Positives = 66/190 (34%), Gaps = 29/190 (15%) Query: 18 ENIEAFNSASKTVKCLQLANGAVYYD-------EEKHWKEVHDEKIKALEVIIEKANAAP 70 + N+A +Q + V D + H + + ++ L I+E Sbjct: 279 NQVNGINAA--IHAMIQASGKLVLIDKLLPKLKDGGHKVLIFSQMVRCL-DILE---DYL 332 Query: 71 IIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEW--NEGKIPLLFAHPASCGHGLNLQYG 128 + Y + R++ Q I + E + + G G+NL Sbjct: 333 VYRRYQYERIDGRVRGNLRQA--------AIDRFCKPESDRFVFLLCTRAGGLGINLT-A 383 Query: 129 GNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKS 188 + +V F W+ + Q R + G +AV VY LI QN+ + + R K Sbjct: 384 ADTVVIFDSDWNPQNDLQAQARC-----HRIGQSKAVKVYRLITQNSYEREMFDRASLKL 438 Query: 189 TIQDLLLNAL 198 + +L ++ Sbjct: 439 GLDRAVLQSM 448 >gi|148744739|gb|AAI42882.1| Smarca5 protein [Danio rerio] Length = 534 Score = 83.1 bits (204), Expect = 2e-14, Method: Composition-based stats. Identities = 23/114 (20%), Positives = 51/114 (44%), Gaps = 9/114 (7%) Query: 86 KAFPQGRTLDKDPC-TIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLE 142 G+T ++ +I +NE L + G G+NL ++++ + W+ + Sbjct: 8 YCRLDGQTPHEERQISINAFNEPNSSKFLFMLSTRAGGLGINL-ATADVVIIYDSDWNPQ 66 Query: 143 EHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 Q ++R + G K+ V V+ I NT++E +++R K + +++ Sbjct: 67 VDLQAMDR-----AHRIGQKKQVRVFRFITDNTVEERIVERAEMKLRLDSIVIQ 115 >gi|77747807|ref|NP_636826.2| helicase [Xanthomonas campestris pv. campestris str. ATCC 33913] gi|77761256|ref|YP_243854.2| helicase [Xanthomonas campestris pv. campestris str. 8004] Length = 641 Score = 83.1 bits (204), Expect = 2e-14, Method: Composition-based stats. Identities = 39/218 (17%), Positives = 77/218 (35%), Gaps = 42/218 (19%) Query: 9 RELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEK------HWKEVHDEKI----KA 58 RE +G + + S + Q+ + +++ H K+ + Sbjct: 415 RETVDSGEGGD---TAALSLLHQLRQICANPLAAADDRSEFLSLDEHLRHSPKLAWLIEK 471 Query: 59 LEVIIEKANAAPIIVAYHFNSDLARLQKAFP----------------QGRTLDKDPCTIQ 102 L+ I +A +IV F +Q+A + D I Sbjct: 472 LQEI--QATGEKVIVFTEFRDIQRLIQRAIASRLSYQASIVNGSTSVEAGADDSRQIIID 529 Query: 103 EWNE-GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGF 161 + ++ + G G+N+Q N ++ F+ W+ + Q +R + G Sbjct: 530 AFQAKPDFGVIVLSTTAVGFGVNIQ-AANHVIHFTRPWNPAKEDQATDR-----AYRIGQ 583 Query: 162 KRAVFVYYLIAQN----TIDELVLQRLRTKSTIQDLLL 195 ++ VFVYY + +E V +RL TK + + +L Sbjct: 584 EKEVFVYYPTVLGDGFESFEERVAKRLATKRKLSNDML 621 >gi|194756856|ref|XP_001960686.1| GF13478 [Drosophila ananassae] gi|190621984|gb|EDV37508.1| GF13478 [Drosophila ananassae] Length = 1575 Score = 83.1 bits (204), Expect = 2e-14, Method: Composition-based stats. Identities = 22/132 (16%), Positives = 51/132 (38%), Gaps = 7/132 (5%) Query: 66 ANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEG-KIPLLFAHPASCGHGLN 124 +N+ + + + + L + + + E+N + L + G+N Sbjct: 898 SNSPKMEIFFCILKESMHLGDRLDGSTSSQERERLVNEFNANTSVKLFLISTRAGSLGIN 957 Query: 125 LQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRL 184 L G N ++ F W+ Q + RI + G + FVY ++ +++ + R Sbjct: 958 LT-GANRVIIFDASWNPCHDTQAVYRI-----YRYGQTKPCFVYRIVMDKCLEKKIYDRQ 1011 Query: 185 RTKSTIQDLLLN 196 K + D +++ Sbjct: 1012 IKKQGMSDRIVD 1023 >gi|170092931|ref|XP_001877687.1| DNA repair protein, SNF2 family DNA-dependent ATPase [Laccaria bicolor S238N-H82] gi|164647546|gb|EDR11790.1| DNA repair protein, SNF2 family DNA-dependent ATPase [Laccaria bicolor S238N-H82] Length = 1051 Score = 82.7 bits (203), Expect = 2e-14, Method: Composition-based stats. Identities = 34/169 (20%), Positives = 55/169 (32%), Gaps = 35/169 (20%) Query: 56 IKALEVIIEKANAAPIIVAYHFNSDLARL-----QKAFPQGRTLDKDPCT-----IQEWN 105 + L II ++ H+ S L L +K + R + P + +N Sbjct: 726 LAKLLTIIRHTTEEKCVLVSHYTSTLNILEAFCQKKGYSYYRLDGQTPQVKRQEYVNAFN 785 Query: 106 E---GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDL----------------EEHQQ 146 + + G G+NL G + L W+ Q Sbjct: 786 NVSQRSSFIFLLSSKAGGLGINL-IGASRLCLIDSDWNPRLVGRRTQLTPTLISDSHDLQ 844 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 + R + G KR VF+Y + IDE + QR TK + L+ Sbjct: 845 SMARC-----HRDGQKRPVFIYRFLTTGAIDEKIYQRQVTKLGLSASLI 888 >gi|145329971|ref|NP_001077971.1| SYD (SPLAYED); ATPase/ chromatin binding [Arabidopsis thaliana] gi|330253007|gb|AEC08101.1| ATPase splayed [Arabidopsis thaliana] Length = 3543 Score = 82.7 bits (203), Expect = 2e-14, Method: Composition-based stats. Identities = 29/157 (18%), Positives = 57/157 (36%), Gaps = 20/157 (12%) Query: 55 KIKALEVIIEK--ANAAPIIVAYHFNSDLARL---------QKAFPQGRTLDKDPCT-IQ 102 K++ L+ ++ K A ++ L + + G+T D I Sbjct: 1074 KLEMLDRMLPKLKATDHRVLFFSTMTRLLDVMEDYLTLKGYKYLRLDGQTSGGDRGALID 1133 Query: 103 EWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 +N+ P + + G G+NLQ + ++ F W+ + Q R + G Sbjct: 1134 GFNKSGSPFFIFLLSIRAGGVGVNLQ-AADTVILFDTDWNPQVDLQAQAR-----AHRIG 1187 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 K+ V V N+++E V K + + + A Sbjct: 1188 QKKDVLVLRFETVNSVEEQVRASAEHKLGVANQSITA 1224 >gi|60499608|gb|AAX22009.1| SPLAYED splice variant [Arabidopsis thaliana] Length = 3543 Score = 82.7 bits (203), Expect = 2e-14, Method: Composition-based stats. Identities = 29/157 (18%), Positives = 57/157 (36%), Gaps = 20/157 (12%) Query: 55 KIKALEVIIEK--ANAAPIIVAYHFNSDLARL---------QKAFPQGRTLDKDPCT-IQ 102 K++ L+ ++ K A ++ L + + G+T D I Sbjct: 1074 KLEMLDRMLPKLKATDHRVLFFSTMTRLLDVMEDYLTLKGYKYLRLDGQTSGGDRGALID 1133 Query: 103 EWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 +N+ P + + G G+NLQ + ++ F W+ + Q R + G Sbjct: 1134 GFNKSGSPFFIFLLSIRAGGVGVNLQ-AADTVILFDTDWNPQVDLQAQAR-----AHRIG 1187 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 K+ V V N+++E V K + + + A Sbjct: 1188 QKKDVLVLRFETVNSVEEQVRASAEHKLGVANQSITA 1224 >gi|159120058|ref|XP_001710245.1| Transcription regulatory protein SNF2 [Giardia lamblia ATCC 50803] gi|157438363|gb|EDO82571.1| Transcription regulatory protein SNF2 [Giardia lamblia ATCC 50803] Length = 2079 Score = 82.7 bits (203), Expect = 2e-14, Method: Composition-based stats. Identities = 33/159 (20%), Positives = 64/159 (40%), Gaps = 20/159 (12%) Query: 53 DEKIKALEVIIEKANA--APIIVAYHFN-------SDLARLQKAFP--QGRTLDKDP-CT 100 K++ L+ I+ K + +++ F S L Q F G D D Sbjct: 1094 SGKLELLDNILAKLHKTSHRVLIFSQFKKVLDVLSSYLHYRQYKFVRFDGSVKDVDRNSM 1153 Query: 101 IQEWN--EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQ 158 I+ +N + K + + HGLNLQ + ++ F ++ QQ +R + Sbjct: 1154 IRGYNREDSKDFVFLLSTRAASHGLNLQT-ADTVIIFDCDYNGTYDQQAQDRC-----YR 1207 Query: 159 AGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 G V V+ L + I+ +L +K ++ ++++A Sbjct: 1208 LGQVNPVKVFKLYSNTAIESKMLSVATSKLSLATIVMDA 1246 >gi|198434690|ref|XP_002126745.1| PREDICTED: similar to DNA excision repair protein ERCC-6-like (ATP-dependent helicase ERCC6-like) (PLK1-interacting checkpoint helicase) (Tumor antigen BJ-HCC-15) [Ciona intestinalis] Length = 1159 Score = 82.7 bits (203), Expect = 2e-14, Method: Composition-based stats. Identities = 27/152 (17%), Positives = 58/152 (38%), Gaps = 20/152 (13%) Query: 53 DEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQK-----AFPQGR------TLDKDPC 99 K++ L ++ + ++ L +Q+ F R L + Sbjct: 471 SGKLQFLIPLLLRLREEGHRTLIFSMSRKMLNIIQRILMNLKFKVMRMDGLVTKLSEREK 530 Query: 100 TIQEWNEGK-IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQ 158 ++ + E + G GL L + +V + W+ Q ++RI + Sbjct: 531 RVKLFQEDSSYSVFLLTTQVGGVGLTLT-AADRVVIYDPSWNPATDSQAVDRI-----YR 584 Query: 159 AGFKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 G K++V VY LI +++E + +R K+++ Sbjct: 585 IGQKKSVAVYRLITCGSVEEKIYRRQIFKNSV 616 >gi|193786196|dbj|BAG51479.1| unnamed protein product [Homo sapiens] Length = 737 Score = 82.7 bits (203), Expect = 2e-14, Method: Composition-based stats. Identities = 30/160 (18%), Positives = 62/160 (38%), Gaps = 20/160 (12%) Query: 52 HDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAF---------PQGRTLDKDPCT 100 K + L+ I+ +A +++ S + ++ F G T +D Sbjct: 201 ASGKFELLDRILPKLRATNHKVLLFCQMTSLMTIMEDYFAYRGFKYLRLDGTTKAEDRGM 260 Query: 101 I-QEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 + + +NE + + + G GLNLQ + ++ F W+ + Q R Sbjct: 261 LLKTFNEPGSEYFIFLLSTRAGGLGLNLQ-SADTVIIFDSDWNPHQDLQA-----QDRAH 314 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + G + V V L N+++E +L + K + ++ A Sbjct: 315 RIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQA 354 >gi|261408341|ref|YP_003244582.1| SNF2-like protein [Paenibacillus sp. Y412MC10] gi|261284804|gb|ACX66775.1| SNF2-related protein [Paenibacillus sp. Y412MC10] Length = 575 Score = 82.7 bits (203), Expect = 3e-14, Method: Composition-based stats. Identities = 33/156 (21%), Positives = 66/156 (42%), Gaps = 17/156 (10%) Query: 52 HDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAF--------PQGRTLDKDPCT-IQ 102 + K + +I++ N +IV + + L F P +++ + Sbjct: 365 ANTKAEKAIELIQQMNEK-VIVFTEYRATQEYLLNYFRDHGLVSVPYRGGMNRGKKDWMM 423 Query: 103 EWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFK 162 + GK ++ A + G G+NLQ+ + ++ F L W+ +Q I R+ + G Sbjct: 424 DLFRGKAQVMIA-TEAGGEGINLQF-CHHMINFDLPWNPMRVEQRIGRV-----HRLGQT 476 Query: 163 RAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNAL 198 V +Y L TI+E +L L K + ++++ L Sbjct: 477 NDVKIYNLSTSGTIEEHILNLLHEKINMFEMVIGGL 512 >gi|224100361|ref|XP_002311847.1| chromatin remodeling complex subunit [Populus trichocarpa] gi|222851667|gb|EEE89214.1| chromatin remodeling complex subunit [Populus trichocarpa] Length = 670 Score = 82.7 bits (203), Expect = 3e-14, Method: Composition-based stats. Identities = 37/220 (16%), Positives = 76/220 (34%), Gaps = 35/220 (15%) Query: 6 KFQRELYCDLQGENIEAFNSASKTVKCLQLA-----------------NGAVYYDEEKHW 48 + Q++ Y L +++E N+ + + L +A G Y E Sbjct: 449 QMQKQYYRALLQKDLEVVNAGGERKRLLNIAMQLRKCCNHPYLFQGAEPGPPYTTGEHLV 508 Query: 49 KEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARL---------QKAFPQGRTLDKDP- 98 + + K + +++ L L Q G T +D Sbjct: 509 TNAGKMVLLDKLLPKLKERDSRVLIFSQMTRLLDILEDYLIFSGHQYCRIDGNTGGEDRD 568 Query: 99 CTIQEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 +I +N + + G G+NL ++++ + W+ + Q R Sbjct: 569 ASIDAFNRPGSEKFCFLLSTRAGGLGINL-ATADVVILYDSDWNPQVDLQA-----QDRA 622 Query: 157 RQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + G K+ V V+ + TI+E V++R K + L++ Sbjct: 623 HRIGQKKEVQVFRFCTEYTIEEKVIERAYKKLALDALVIQ 662 >gi|168037602|ref|XP_001771292.1| SNF2 family DNA-dependent ATPase [Physcomitrella patens subsp. patens] gi|162677381|gb|EDQ63852.1| SNF2 family DNA-dependent ATPase [Physcomitrella patens subsp. patens] Length = 1032 Score = 82.7 bits (203), Expect = 3e-14, Method: Composition-based stats. Identities = 25/140 (17%), Positives = 51/140 (36%), Gaps = 18/140 (12%) Query: 69 APIIVAYHFNSDLARLQK----------AFPQGRTLDKDPCTIQEWNEG--KIPLLFAHP 116 + +++ L L+ T D I ++N + Sbjct: 486 SRVLIFSQMTRLLDILEDYCQYRTYQYCRIDGNTTGDDRESAIDQFNAPNSEKFCFLLST 545 Query: 117 ASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTI 176 + G G+NL +I++ + W+ + Q R + G K+ V V+ + TI Sbjct: 546 RAGGLGINL-ATADIVILYDSDWNPQVDLQA-----QDRAHRIGQKKEVQVFRFCTEFTI 599 Query: 177 DELVLQRLRTKSTIQDLLLN 196 +E V++R K + L++ Sbjct: 600 EEKVIERAYKKLALDALVIQ 619 >gi|30683830|ref|NP_850116.1| SYD (SPLAYED); ATPase/ chromatin binding [Arabidopsis thaliana] gi|330253006|gb|AEC08100.1| ATPase splayed [Arabidopsis thaliana] Length = 3574 Score = 82.7 bits (203), Expect = 3e-14, Method: Composition-based stats. Identities = 29/157 (18%), Positives = 57/157 (36%), Gaps = 20/157 (12%) Query: 55 KIKALEVIIEK--ANAAPIIVAYHFNSDLARL---------QKAFPQGRTLDKDPCT-IQ 102 K++ L+ ++ K A ++ L + + G+T D I Sbjct: 1074 KLEMLDRMLPKLKATDHRVLFFSTMTRLLDVMEDYLTLKGYKYLRLDGQTSGGDRGALID 1133 Query: 103 EWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 +N+ P + + G G+NLQ + ++ F W+ + Q R + G Sbjct: 1134 GFNKSGSPFFIFLLSIRAGGVGVNLQ-AADTVILFDTDWNPQVDLQAQAR-----AHRIG 1187 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 K+ V V N+++E V K + + + A Sbjct: 1188 QKKDVLVLRFETVNSVEEQVRASAEHKLGVANQSITA 1224 >gi|194908547|ref|XP_001981791.1| GG12244 [Drosophila erecta] gi|190656429|gb|EDV53661.1| GG12244 [Drosophila erecta] Length = 1277 Score = 82.7 bits (203), Expect = 3e-14, Method: Composition-based stats. Identities = 26/134 (19%), Positives = 53/134 (39%), Gaps = 18/134 (13%) Query: 75 YHFNSDLARLQKAFPQGRTL---------DKDPCTIQEWNEG---KIPLLFAHPASCGHG 122 Y F D+ + + G+ ++ +++N + L + G G Sbjct: 911 YEFEGDVGDFKGCWTSGKDYFRLDGSCSVEQREAMCKQFNNVTNLRARLFLISTRAGGLG 970 Query: 123 LNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQ 182 +NL N +V F + W+ Q I R+ + G + ++Y LIA T+++ V + Sbjct: 971 INL-VAANRVVIFDVSWNPSHDTQSIFRV-----YRFGQIKPCYIYRLIAMGTMEQKVYE 1024 Query: 183 RLRTKSTIQDLLLN 196 R K +++ Sbjct: 1025 RQVAKQATAKRVID 1038 >gi|13603721|gb|AAK31908.1|AF247809_1 putative chromatin remodeling protein SYD [Arabidopsis thaliana] Length = 3574 Score = 82.7 bits (203), Expect = 3e-14, Method: Composition-based stats. Identities = 29/157 (18%), Positives = 57/157 (36%), Gaps = 20/157 (12%) Query: 55 KIKALEVIIEK--ANAAPIIVAYHFNSDLARL---------QKAFPQGRTLDKDPCT-IQ 102 K++ L+ ++ K A ++ L + + G+T D I Sbjct: 1074 KLEMLDRMLPKLKATDHRVLFFSTMTRLLDVMEDYLTLKGYKYLRLDGQTSGGDRGALID 1133 Query: 103 EWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 +N+ P + + G G+NLQ + ++ F W+ + Q R + G Sbjct: 1134 GFNKSGSPFFIFLLSIRAGGVGVNLQ-AADTVILFDTDWNPQVDLQAQAR-----AHRIG 1187 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 K+ V V N+++E V K + + + A Sbjct: 1188 QKKDVLVLRFETVNSVEEQVRASAEHKLGVANQSITA 1224 >gi|20197603|gb|AAD29835.2| putative SNF2 subfamily transcription regulator [Arabidopsis thaliana] Length = 3571 Score = 82.7 bits (203), Expect = 3e-14, Method: Composition-based stats. Identities = 29/157 (18%), Positives = 57/157 (36%), Gaps = 20/157 (12%) Query: 55 KIKALEVIIEK--ANAAPIIVAYHFNSDLARL---------QKAFPQGRTLDKDPCT-IQ 102 K++ L+ ++ K A ++ L + + G+T D I Sbjct: 1071 KLEMLDRMLPKLKATDHRVLFFSTMTRLLDVMEDYLTLKGYKYLRLDGQTSGGDRGALID 1130 Query: 103 EWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 +N+ P + + G G+NLQ + ++ F W+ + Q R + G Sbjct: 1131 GFNKSGSPFFIFLLSIRAGGVGVNLQ-AADTVILFDTDWNPQVDLQAQAR-----AHRIG 1184 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 K+ V V N+++E V K + + + A Sbjct: 1185 QKKDVLVLRFETVNSVEEQVRASAEHKLGVANQSITA 1221 >gi|330796151|ref|XP_003286132.1| hypothetical protein DICPUDRAFT_150076 [Dictyostelium purpureum] gi|325083877|gb|EGC37318.1| hypothetical protein DICPUDRAFT_150076 [Dictyostelium purpureum] Length = 2186 Score = 82.7 bits (203), Expect = 3e-14, Method: Composition-based stats. Identities = 27/146 (18%), Positives = 51/146 (34%), Gaps = 18/146 (12%) Query: 65 KANAAPIIVAYHFNSDLARLQKAF---------PQGRTLDKDPCT-IQEWNEGKIP--LL 112 KA +++ S L L G D I +++ + Sbjct: 821 KAGGHKVLIFSQMVSVLDILDDYLTFRGYPHERIDGSIKGNDRQAAIDRFSKPDSDRFVF 880 Query: 113 FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIA 172 + G G+NL + ++ F W+ + Q R + G + V VY L+ Sbjct: 881 LLCTRAGGIGINLT-AADTVIIFDSDWNPQNDLQAQARC-----HRIGQDKMVKVYRLVT 934 Query: 173 QNTIDELVLQRLRTKSTIQDLLLNAL 198 +NT + L+ R K + ++L + Sbjct: 935 KNTYERLMFDRASKKLGLDRVVLTKM 960 >gi|326472599|gb|EGD96608.1| DNA repair protein Rad5 [Trichophyton tonsurans CBS 112818] Length = 1177 Score = 82.7 bits (203), Expect = 3e-14, Method: Composition-based stats. Identities = 33/187 (17%), Positives = 53/187 (28%), Gaps = 50/187 (26%) Query: 52 HDEKIKALEVIIEKA-NAAPIIVAYHFNSDLARLQK----------AFPQGRTLDKDPCT 100 KI AL + + +V F S L + F + Sbjct: 971 TSAKIHALITHLTRLPRGTKAVVFSQFTSFLDLISPQLTTAGIAHLRFDGTMSQKARATV 1030 Query: 101 IQEWNEGKI---------------------------------PLLFAHPASCGHGLNLQY 127 + ++N I +L + G GLNL Sbjct: 1031 LAQFNAPIIDEEDIDDDDDIANSPDPFKGYRSRPRKDKGPPPSVLLISLRAGGVGLNLTV 1090 Query: 128 GGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTK 187 N + WW Q I+R+ + G R V V + +N+I+ +L+ K Sbjct: 1091 -ANHVFMMDPWWSFAVEAQAIDRV-----HRMGQLRDVKVSRFVVKNSIEGRILKIQERK 1144 Query: 188 STIQDLL 194 I L Sbjct: 1145 MMIAGSL 1151 >gi|302652102|ref|XP_003017911.1| hypothetical protein TRV_08077 [Trichophyton verrucosum HKI 0517] gi|291181496|gb|EFE37266.1| hypothetical protein TRV_08077 [Trichophyton verrucosum HKI 0517] Length = 1177 Score = 82.7 bits (203), Expect = 3e-14, Method: Composition-based stats. Identities = 33/187 (17%), Positives = 53/187 (28%), Gaps = 50/187 (26%) Query: 52 HDEKIKALEVIIEKA-NAAPIIVAYHFNSDLARLQK----------AFPQGRTLDKDPCT 100 KI AL + + +V F S L + F + Sbjct: 971 TSAKIHALITHLTRLPRGTKAVVFSQFTSFLDLISPQLTTAGIAHLRFDGTMSQKARATV 1030 Query: 101 IQEWNEGKI---------------------------------PLLFAHPASCGHGLNLQY 127 + ++N I +L + G GLNL Sbjct: 1031 LAQFNAPIIDEEDIDDDDDIAHSPDPFKEYRNRRRKDKGSPPSVLLISLRAGGVGLNLTV 1090 Query: 128 GGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTK 187 N + WW Q I+R+ + G R V V + +N+I+ +L+ K Sbjct: 1091 -ANHVFMMDPWWSFAVEAQAIDRV-----HRMGQLRDVKVSRFVVKNSIEGRILKIQERK 1144 Query: 188 STIQDLL 194 I L Sbjct: 1145 MMIAGSL 1151 >gi|302497381|ref|XP_003010691.1| hypothetical protein ARB_03393 [Arthroderma benhamiae CBS 112371] gi|291174234|gb|EFE30051.1| hypothetical protein ARB_03393 [Arthroderma benhamiae CBS 112371] Length = 1177 Score = 82.7 bits (203), Expect = 3e-14, Method: Composition-based stats. Identities = 33/187 (17%), Positives = 53/187 (28%), Gaps = 50/187 (26%) Query: 52 HDEKIKALEVIIEKA-NAAPIIVAYHFNSDLARLQK----------AFPQGRTLDKDPCT 100 KI AL + + +V F S L + F + Sbjct: 971 TSAKIHALITHLTRLPRGTKAVVFSQFTSFLDLISPQLTTAGIAHLRFDGTMSQKARATV 1030 Query: 101 IQEWNEGKI---------------------------------PLLFAHPASCGHGLNLQY 127 + ++N I +L + G GLNL Sbjct: 1031 LAQFNAPIIDEEDIDDDDDIAHSPDPFKEYRNRRRKDKGSPPSVLLISLRAGGVGLNLTV 1090 Query: 128 GGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTK 187 N + WW Q I+R+ + G R V V + +N+I+ +L+ K Sbjct: 1091 -ANHVFMMDPWWSFAVEAQAIDRV-----HRMGQLRDVKVSRFVVKNSIEGRILKIQERK 1144 Query: 188 STIQDLL 194 I L Sbjct: 1145 MMIAGSL 1151 >gi|116196848|ref|XP_001224236.1| hypothetical protein CHGG_05022 [Chaetomium globosum CBS 148.51] gi|88180935|gb|EAQ88403.1| hypothetical protein CHGG_05022 [Chaetomium globosum CBS 148.51] Length = 819 Score = 82.7 bits (203), Expect = 3e-14, Method: Composition-based stats. Identities = 33/152 (21%), Positives = 58/152 (38%), Gaps = 19/152 (12%) Query: 42 YDEEKHWKEVHDEKIKALEVIIEK---ANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDP 98 +EE E K +AL I++ + + +I+ + S +Q R P Sbjct: 656 DEEESLDPETKSSKTEALLKILQATLKNDGSKVIIFSQWTSM-KYVQTRCRYSRISTTTP 714 Query: 99 CTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQ 158 T ++ A + C GLNL + +V WW Q ++R+ + Sbjct: 715 AT---------RIMPASLSVCSVGLNL-VSADTVVLADSWWAPAIEDQAVDRV-----HR 759 Query: 159 AGFKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 G R V+ L+ + T++E VL K + Sbjct: 760 LGQTRPTTVWRLVMEGTVEERVLDIQGEKREL 791 >gi|326483589|gb|EGE07599.1| DNA repair protein rad5 [Trichophyton equinum CBS 127.97] Length = 1152 Score = 82.7 bits (203), Expect = 3e-14, Method: Composition-based stats. Identities = 33/187 (17%), Positives = 53/187 (28%), Gaps = 50/187 (26%) Query: 52 HDEKIKALEVIIEKA-NAAPIIVAYHFNSDLARLQK----------AFPQGRTLDKDPCT 100 KI AL + + +V F S L + F + Sbjct: 946 TSAKIHALITHLTRLPRGTKAVVFSQFTSFLDLISPQLTTAGIAHLRFDGTMSQKARATV 1005 Query: 101 IQEWNEGKI---------------------------------PLLFAHPASCGHGLNLQY 127 + ++N I +L + G GLNL Sbjct: 1006 LAQFNAPIIDEEDIDDDDDIANFPDPFKGYRSRPRKDKGPPPSVLLISLRAGGVGLNLTV 1065 Query: 128 GGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTK 187 N + WW Q I+R+ + G R V V + +N+I+ +L+ K Sbjct: 1066 -ANHVFMMDPWWSFAVEAQAIDRV-----HRMGQLRDVKVSRFVVKNSIEGRILKIQERK 1119 Query: 188 STIQDLL 194 I L Sbjct: 1120 MMIAGSL 1126 >gi|327298855|ref|XP_003234121.1| DNA repair protein Rad5 [Trichophyton rubrum CBS 118892] gi|326464299|gb|EGD89752.1| DNA repair protein Rad5 [Trichophyton rubrum CBS 118892] Length = 1027 Score = 82.7 bits (203), Expect = 3e-14, Method: Composition-based stats. Identities = 33/187 (17%), Positives = 53/187 (28%), Gaps = 50/187 (26%) Query: 52 HDEKIKALEVIIEKA-NAAPIIVAYHFNSDLARLQK----------AFPQGRTLDKDPCT 100 KI AL + + +V F S L + F + Sbjct: 821 TSAKIHALITHLTRLPRGTKAVVFSQFTSFLDLISPQLTTAGIAHLRFDGTMSQKARATV 880 Query: 101 IQEWNEGKI---------------------------------PLLFAHPASCGHGLNLQY 127 + ++N I +L + G GLNL Sbjct: 881 LAQFNAPIIDEEDIDDDDDIAHSPDPFKEYRNRRRKDKGSPPSVLLISLRAGGVGLNLTV 940 Query: 128 GGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTK 187 N + WW Q I+R+ + G R V V + +N+I+ +L+ K Sbjct: 941 -ANHVFMMDPWWSFAVEAQAIDRV-----HRMGQLRDVKVSRFVVKNSIEGRILKIQERK 994 Query: 188 STIQDLL 194 I L Sbjct: 995 MMIAGSL 1001 >gi|259149676|emb|CAY86480.1| Uls1p [Saccharomyces cerevisiae EC1118] Length = 1619 Score = 82.7 bits (203), Expect = 3e-14, Method: Composition-based stats. Identities = 24/164 (14%), Positives = 63/164 (38%), Gaps = 22/164 (13%) Query: 52 HDEKIKALEVII----EKANAAPIIVAYHFNSDLARLQK------AFPQGRTLD-----K 96 KI+ +I +++ II+ F + L+ FP + + + Sbjct: 1441 PSTKIEQCIRVIQRVFDESATEKIIIFSQFTTFFEILEHFLKNKLNFPYLKYIGSMNAQR 1500 Query: 97 DPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTR 155 I E+ + + +L + GL L ++++ +W+ +Q +R Sbjct: 1501 RSDVINEFYRDPEKRILLISMKAGNSGLTLTCANHVVI-VDPFWNPYVEEQAQDRC---- 1555 Query: 156 QRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 + + V V+ L ++++++ + + + K + D ++ K Sbjct: 1556 -YRISQTKKVQVHKLFIKDSVEDRISELQKRKKEMVDSAMDPGK 1598 >gi|62087684|dbj|BAD92289.1| SWI/SNF-related matrix-associated actin-dependent regulator of chromatin a3 variant [Homo sapiens] Length = 992 Score = 82.7 bits (203), Expect = 3e-14, Method: Composition-based stats. Identities = 27/163 (16%), Positives = 56/163 (34%), Gaps = 19/163 (11%) Query: 42 YDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQ----------KAFPQG 91 D E + + AL + +K +V F + L+ ++ Sbjct: 825 SDMEWTSSSKINALMHALTDLRKKNPNIKSLVVSQFTTFLSLIEIPLKASGFVFTRLDGS 884 Query: 92 RTLDKDPCTIQEWNE---GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMI 148 K +IQ + G ++ + G GLNL + + W+ Q Sbjct: 885 MAQKKRVESIQCFQNTEAGSPTIMLLSLKAGGVGLNL-SAASRVFLMDPAWNPAAEDQCF 943 Query: 149 ERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQ 191 +R + G K+ V + I +++++E +L+ K + Sbjct: 944 DRC-----HRLGQKQEVIITKFIVKDSVEENMLKIQNKKRELA 981 >gi|195342147|ref|XP_002037663.1| GM18179 [Drosophila sechellia] gi|194132513|gb|EDW54081.1| GM18179 [Drosophila sechellia] Length = 994 Score = 82.7 bits (203), Expect = 3e-14, Method: Composition-based stats. Identities = 20/104 (19%), Positives = 43/104 (41%), Gaps = 8/104 (7%) Query: 97 DPCTIQEWN-EGKIPL-LFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 + +N EG + G G+NL + ++ F W+ + Q R Sbjct: 2 RRQALDHFNAEGSQDFCFLLSTRAGGLGINL-ATADTVIIFDSDWNPQNDLQAQAR---- 56 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNAL 198 + G K V +Y L+ +++E +++R + K + L++ + Sbjct: 57 -AHRIGQKNQVNIYRLVTARSVEEQIVERAKQKMVLDHLVIQRM 99 >gi|315042015|ref|XP_003170384.1| DNA repair protein rad5 [Arthroderma gypseum CBS 118893] gi|311345418|gb|EFR04621.1| DNA repair protein rad5 [Arthroderma gypseum CBS 118893] Length = 1181 Score = 82.7 bits (203), Expect = 3e-14, Method: Composition-based stats. Identities = 32/187 (17%), Positives = 52/187 (27%), Gaps = 50/187 (26%) Query: 52 HDEKIKALEVIIEKA-NAAPIIVAYHFNSDLARLQK----------AFPQGRTLDKDPCT 100 KI AL + +V F S L + F + Sbjct: 975 TSAKIHALITHLSHLPKGTKAVVFSQFTSFLDLISPQLTTAGIAHLRFDGTMSQKARATV 1034 Query: 101 IQEWNEGKI---------------------------------PLLFAHPASCGHGLNLQY 127 + ++N + +L + G GLNL Sbjct: 1035 LAQFNAPIVDEDDIDDDEDITNSPDPFKGYRSKPKKEKTLPPSVLLISLRAGGVGLNLTV 1094 Query: 128 GGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTK 187 N + WW Q I+R+ + G R V V + +N+I+ +L+ K Sbjct: 1095 -ANHVFMMDPWWSFAVEAQAIDRV-----HRMGQLRDVKVVRFVVKNSIEGRILKIQERK 1148 Query: 188 STIQDLL 194 I L Sbjct: 1149 MMIAGSL 1155 >gi|297791319|ref|XP_002863544.1| hypothetical protein ARALYDRAFT_917093 [Arabidopsis lyrata subsp. lyrata] gi|297309379|gb|EFH39803.1| hypothetical protein ARALYDRAFT_917093 [Arabidopsis lyrata subsp. lyrata] Length = 2251 Score = 82.7 bits (203), Expect = 3e-14, Method: Composition-based stats. Identities = 24/160 (15%), Positives = 59/160 (36%), Gaps = 21/160 (13%) Query: 52 HDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQ------------KAFPQGRTLDKD 97 K+ L +++ + +++ L L+ + + Sbjct: 1005 ASAKLTLLHSMLKVLQKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTFERVDGSVAVADR 1064 Query: 98 PCTIQEWNEGKIP-LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 I +N+ K + +CG G+NL + ++ + ++ Q + R Sbjct: 1065 QAAIARFNQDKNRFVFLLSTRACGLGINL-ATADTVIIYDSDFNPHADIQAMNR-----A 1118 Query: 157 RQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + G + + VY L+ + +++E +LQ + K + L +N Sbjct: 1119 HRIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFVN 1158 >gi|71028160|ref|XP_763723.1| hypothetical protein [Theileria parva strain Muguga] gi|68350677|gb|EAN31440.1| hypothetical protein, conserved [Theileria parva] Length = 845 Score = 82.7 bits (203), Expect = 3e-14, Method: Composition-based stats. Identities = 26/143 (18%), Positives = 53/143 (37%), Gaps = 19/143 (13%) Query: 56 IKALEVIIEKANAAPIIVAYHFNSDLARLQK-----------AFPQGRTLDKDPCTIQEW 104 ++ L I+E+ +++ F + L +Q +L I + Sbjct: 702 LEILSNIMERNE--KVLIFSQFTNYLDIIQHVLRLREITPVLRLDGTVSLTDRDTIINTF 759 Query: 105 NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA 164 N + +L GLNL N ++ W+ Q +R + G ++ Sbjct: 760 NTDAVSILLISVKVGNVGLNLSVANN-VILMDQSWNPYNDIQAEDRC-----HRIGQQKI 813 Query: 165 VFVYYLIAQNTIDELVLQRLRTK 187 V +Y L ++TI+E ++ + K Sbjct: 814 VNIYKLFVKDTIEEYIIVKSHNK 836 >gi|296809774|ref|XP_002845225.1| DNA repair protein rad5 [Arthroderma otae CBS 113480] gi|238842613|gb|EEQ32275.1| DNA repair protein rad5 [Arthroderma otae CBS 113480] Length = 1178 Score = 82.7 bits (203), Expect = 3e-14, Method: Composition-based stats. Identities = 34/187 (18%), Positives = 54/187 (28%), Gaps = 50/187 (26%) Query: 52 HDEKIKALEVIIEKA-NAAPIIVAYHFNSDLARLQK----------AFPQGRTLDKDPCT 100 KI AL + + +V F S L + F + Sbjct: 972 TSAKIHALITHLTRLPRGTKAVVFSQFTSFLDLISPQLTAAGIAHLRFDGTMSQKARATV 1031 Query: 101 IQEWNEG------------------------------KIP---LLFAHPASCGHGLNLQY 127 + ++N K P +L + G GLNL Sbjct: 1032 LAQFNAPIIDEEDIEDDDDIANSPGPFRSYRSKPKKEKTPPANVLLISLRAGGVGLNLTV 1091 Query: 128 GGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTK 187 N + WW Q I+R+ + G R V V + +N+I+ +L+ K Sbjct: 1092 -ANHVFMMDPWWSFAVEAQAIDRV-----HRMGQLRDVKVSRFVVKNSIEGRILRIQERK 1145 Query: 188 STIQDLL 194 I L Sbjct: 1146 MMIAGSL 1152 >gi|167517701|ref|XP_001743191.1| hypothetical protein [Monosiga brevicollis MX1] gi|163778290|gb|EDQ91905.1| predicted protein [Monosiga brevicollis MX1] Length = 102 Score = 82.7 bits (203), Expect = 3e-14, Method: Composition-based stats. Identities = 25/99 (25%), Positives = 38/99 (38%), Gaps = 7/99 (7%) Query: 87 AFPQGRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQ 145 ++ + I ++N I G G+NL G + +V F W+ Sbjct: 10 RMDGMTSIKRRQPLIAQFNSNPSIFTFVLTTRVGGLGVNLT-GADRVVIFDPDWNPSTDV 68 Query: 146 QMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRL 184 Q ER + G RAV VY L+ TI+E + R Sbjct: 69 QARERAW-----RIGQSRAVAVYRLLCAGTIEEKIYHRQ 102 >gi|67515525|ref|XP_657648.1| hypothetical protein AN0044.2 [Aspergillus nidulans FGSC A4] gi|74681569|sp|Q5BHD6|RAD5_EMENI RecName: Full=DNA repair protein rad5 gi|40746207|gb|EAA65363.1| hypothetical protein AN0044.2 [Aspergillus nidulans FGSC A4] gi|259489769|tpe|CBF90313.1| TPA: DNA repair protein rad5 (EC 3.6.1.-) [Source:UniProtKB/Swiss-Prot;Acc:Q5BHD6] [Aspergillus nidulans FGSC A4] Length = 1202 Score = 82.7 bits (203), Expect = 3e-14, Method: Composition-based stats. Identities = 23/84 (27%), Positives = 36/84 (42%), Gaps = 6/84 (7%) Query: 111 LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYL 170 +L + G GLNL N+ + WW Q I+R+ + G R V V Sbjct: 1101 VLLISLKAGGVGLNLTAASNVFMM-DPWWSFAIEAQAIDRV-----HRMGQLRDVNVVRF 1154 Query: 171 IAQNTIDELVLQRLRTKSTIQDLL 194 I +++I+E +L+ K I L Sbjct: 1155 IVKDSIEERMLRVQERKMGIAGSL 1178 >gi|331217115|ref|XP_003321236.1| Rad54b [Puccinia graminis f. sp. tritici CRL 75-36-700-3] gi|309300226|gb|EFP76817.1| Rad54b [Puccinia graminis f. sp. tritici CRL 75-36-700-3] Length = 965 Score = 82.7 bits (203), Expect = 3e-14, Method: Composition-based stats. Identities = 37/164 (22%), Positives = 61/164 (37%), Gaps = 30/164 (18%) Query: 53 DEKIKALE---VIIEKANAAPIIVAYHFNSDLARLQKA-----FPQGRTLDKDPCTIQE- 103 K+ AL I++K N II+ +F L ++ +P R K ++ Sbjct: 655 SGKLIALAKFLDILKKKNNEKIILVSNFTKTLDIVESHCKASHYPFCRLDGKTAQNQRDN 714 Query: 104 ----WNEGKIP---LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 +N + S G GLNL G + + Q + RI Sbjct: 715 IVQVFNRSSASAQFIFLLSSKSGGVGLNL-IGASR--------NPATDLQAMARIW---- 761 Query: 157 RQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKK 200 + G ++ +Y + TIDE + QR TK + L++A K Sbjct: 762 -RQGQQKPCHIYRFLTTGTIDECIFQRQVTKIGLATDLMSAPKA 804 >gi|312381992|gb|EFR27591.1| hypothetical protein AND_05624 [Anopheles darlingi] Length = 1508 Score = 82.7 bits (203), Expect = 3e-14, Method: Composition-based stats. Identities = 29/169 (17%), Positives = 58/169 (34%), Gaps = 30/169 (17%) Query: 52 HDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQK---------------------AF 88 K++ I+E++ ++V L +++ Sbjct: 163 TSPKMEIFFCILEESIRLGDRLLVFSQSLLTLNLIERFLQRNKIPGTESHWSRNISYFRL 222 Query: 89 PQGRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQM 147 + I E+N + L + G+NL G N +V F W+ Q Sbjct: 223 DGSTVAQEREKLINEFNSNPNVHLFLVSTRAGSLGINL-VGANRVVVFDASWNPCHDTQA 281 Query: 148 IERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + R + G K+ FVY L+ N +++ + R K + D +++ Sbjct: 282 V-----CRVYRYGQKKPCFVYRLVMDNCLEKKIYDRQINKQGMSDRIVD 325 >gi|149636100|ref|XP_001509337.1| PREDICTED: similar to chromodomain helicase DNA binding protein 6 [Ornithorhynchus anatinus] Length = 2613 Score = 82.7 bits (203), Expect = 3e-14, Method: Composition-based stats. Identities = 24/149 (16%), Positives = 49/149 (32%), Gaps = 18/149 (12%) Query: 66 ANAAPIIVAYHFNSDLA---------RLQKAFPQGRTL-DKDPCTIQEWNEGKIP--LLF 113 A +++ L R GR + I + + + Sbjct: 941 AGGHKVLIFSQMVRCLDXXXSFGFPTRYTYERIDGRVRGNLRQAAIDRFCKPDSDRFVFL 1000 Query: 114 AHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQ 173 + G G+NL + + F W+ + Q R + G +AV VY LI + Sbjct: 1001 LCTRAGGLGINLT-AADTCIIFDSDWNPQNDLQAQARC-----HRIGQSKAVKVYRLITR 1054 Query: 174 NTIDELVLQRLRTKSTIQDLLLNALKKET 202 N+ + + + K + +L + ++ Sbjct: 1055 NSYEREMFDKASLKLGLDKAVLQDINRKG 1083 >gi|331248703|ref|XP_003336974.1| hypothetical protein PGTG_18553 [Puccinia graminis f. sp. tritici CRL 75-36-700-3] gi|309315964|gb|EFP92555.1| hypothetical protein PGTG_18553 [Puccinia graminis f. sp. tritici CRL 75-36-700-3] Length = 711 Score = 82.7 bits (203), Expect = 3e-14, Method: Composition-based stats. Identities = 31/189 (16%), Positives = 66/189 (34%), Gaps = 27/189 (14%) Query: 16 QGENIEAFNSASKTVKCLQLANGAVYYDEE----KHWKEVHDEKIKALEVIIEK--ANAA 69 GE ++ + Q N ++ +E K+W+ K+ L +E+ Sbjct: 522 SGEPWDSTEFFKQLTMIRQFCNHPIFARDEIPHQKNWRWQDSAKLVHLVDNLERFLRGGR 581 Query: 70 PII-----VAYHFNSDLARLQKAFPQGR----------TLDKDPCTIQEWNEGKIPLLFA 114 I+ V F + L ++KA + + +D + + +L Sbjct: 582 GILRPKAVVFSSFVAFLEIIEKALKEKQMGCTWLMTLGIAKRDENLARFRTDPNCNILLG 641 Query: 115 HPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQN 174 + G G++L+ N + W+ Q ++R+ + G V VY Q Sbjct: 642 SIQAAGVGIDLRCAQN-VYMMEPNWNPAMENQAVDRL-----YRLGQTNEVHVYRYYVQG 695 Query: 175 TIDELVLQR 183 +++ + Q Sbjct: 696 SLEMNIHQA 704 >gi|171688590|ref|XP_001909235.1| hypothetical protein [Podospora anserina S mat+] gi|170944257|emb|CAP70367.1| unnamed protein product [Podospora anserina S mat+] Length = 1092 Score = 82.7 bits (203), Expect = 3e-14, Method: Composition-based stats. Identities = 23/143 (16%), Positives = 54/143 (37%), Gaps = 17/143 (11%) Query: 72 IVAYHFNSDLARLQKAFPQGR----------TLDKDPCTIQEW-NEGKIPLLFAHPASCG 120 +V + S L ++ A T + ++ + ++ + ++ + G Sbjct: 937 VVFSGWTSHLDLIEIALDDAGITHSRLDGKMTRNARNQAMEAFRDDPNVQVILVSIMAGG 996 Query: 121 HGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELV 180 GLNL G ++ V ++ Q ++R+ + G KR V I + +E + Sbjct: 997 MGLNLTAGNSVFVM-EPQFNPAAEAQAVDRV-----HRLGQKRPVRTVRYIMSGSFEEKM 1050 Query: 181 LQRLRTKSTIQDLLLNALKKETI 203 + K + L ++ + E + Sbjct: 1051 IALQEKKKQLASLSMDRAEAEGV 1073 >gi|198276225|ref|ZP_03208756.1| hypothetical protein BACPLE_02416 [Bacteroides plebeius DSM 17135] gi|198271037|gb|EDY95307.1| hypothetical protein BACPLE_02416 [Bacteroides plebeius DSM 17135] Length = 558 Score = 82.7 bits (203), Expect = 3e-14, Method: Composition-based stats. Identities = 40/209 (19%), Positives = 74/209 (35%), Gaps = 35/209 (16%) Query: 2 KQYHKFQRELYC------DLQGENIEAF---NSASKTVKCLQLANGAVYYDEEKHWKEVH 52 K+Y +R+L + E IE + Q++ + Sbjct: 341 KEYIDAERDLIMYLQKYKEADDEKIEKALRGEVMVRINILRQIS-----------ARGKV 389 Query: 53 DEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQG-RTLDKDPCTIQE------WN 105 + I+ ++ E N II+ + + +L+ FP +D ++ N Sbjct: 390 RDVIEFVKDFRE--NGKKIILFCSLHEVVDQLKSYFPTAVSVTGRDSQDEKQRAVDSFQN 447 Query: 106 EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 K ++ + G GL L N + F W + Q +R + G K +V Sbjct: 448 NPKTDIIICSIKAAGVGLTLTASSN-VAFVEFPWTYADCCQCEDR-----AHRIGQKDSV 501 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 YY + + TIDE V + ++ K I + Sbjct: 502 TCYYFLGRRTIDEKVYRIIQNKKAIAKDV 530 >gi|258511768|ref|YP_003185202.1| SNF2-like protein [Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446] gi|257478494|gb|ACV58813.1| SNF2-related protein [Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446] Length = 572 Score = 82.7 bits (203), Expect = 3e-14, Method: Composition-based stats. Identities = 33/151 (21%), Positives = 68/151 (45%), Gaps = 17/151 (11%) Query: 54 EKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQ---------GRTLDKDPCTIQEW 104 K++A+ ++E A II+ + + L + G ++E Sbjct: 376 AKVEAVLKMLEDAPEK-IIIFTEYRASQDFLMYTLKKHGISAVPFRGGFRRGKKDWMREL 434 Query: 105 NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA 164 KI +L A S G G+NLQ+ + ++ + L W+ +Q I RI + G A Sbjct: 435 FSKKIRVLVA-TESGGEGINLQF-CHHMINYDLPWNPMRLEQRIGRI-----HRLGQTHA 487 Query: 165 VFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 + +L+ ++TI+E +++ L+ K + + ++ Sbjct: 488 CHIAHLVTKDTIEEHIMEILQEKVRMFEAVI 518 >gi|238494328|ref|XP_002378400.1| SNF2 family helicase/ATPase, putative [Aspergillus flavus NRRL3357] gi|220695050|gb|EED51393.1| SNF2 family helicase/ATPase, putative [Aspergillus flavus NRRL3357] Length = 1663 Score = 82.7 bits (203), Expect = 3e-14, Method: Composition-based stats. Identities = 30/149 (20%), Positives = 60/149 (40%), Gaps = 19/149 (12%) Query: 61 VIIEKA--NAAPIIVAYHFNSDLARL---------QKAFPQGRTLDKDPCT-IQEWNEG- 107 II+++ I+V H L + + + GRT + +N G Sbjct: 1258 SIIDESIRAGDKILVFSHSIPTLDYIEHVLRSSNRKYSRLDGRTPVVTRQDATKRFNLGS 1317 Query: 108 KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFV 167 + + + G GLN+ G N ++ F + +Q + R + G ++ VFV Sbjct: 1318 EKQVYLISTRAGGLGLNI-PGANRVIIFDFKFSPVWEEQAVGR-----AYRLGQQKPVFV 1371 Query: 168 YYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 Y IA T +E++ + K+ + +++ Sbjct: 1372 YRFIAGGTFEEVMYNKAVFKTQLAFRVVD 1400 >gi|195349449|ref|XP_002041257.1| GM10241 [Drosophila sechellia] gi|194122952|gb|EDW44995.1| GM10241 [Drosophila sechellia] Length = 1308 Score = 82.7 bits (203), Expect = 3e-14, Method: Composition-based stats. Identities = 26/134 (19%), Positives = 53/134 (39%), Gaps = 18/134 (13%) Query: 75 YHFNSDLARLQKAFPQGRTL---------DKDPCTIQEWNEG---KIPLLFAHPASCGHG 122 Y F D+ + + G+ ++ +++N + L + G G Sbjct: 941 YEFEGDVGDFKGCWTSGKDYFRLDGSCSVEQREAMCKQFNNVTNLRARLFLISTRAGGLG 1000 Query: 123 LNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQ 182 +NL N +V F + W+ Q I R+ + G + ++Y LIA T+++ V + Sbjct: 1001 INL-VAANRVVIFDVSWNPSHDTQSIFRV-----YRFGQIKPCYIYRLIAMGTMEQKVYE 1054 Query: 183 RLRTKSTIQDLLLN 196 R K +++ Sbjct: 1055 RQVAKQATAKRVID 1068 >gi|281347790|gb|EFB23374.1| hypothetical protein PANDA_016786 [Ailuropoda melanoleuca] Length = 1005 Score = 82.7 bits (203), Expect = 3e-14, Method: Composition-based stats. Identities = 29/170 (17%), Positives = 61/170 (35%), Gaps = 23/170 (13%) Query: 39 AVYYDEEKHWKEVHDEKIKALE----VIIEKANAAPIIVAYHFNSDLARLQK-------- 86 A +++ + + KI AL + +K +V F + L+ ++ Sbjct: 814 ACDTEKKSNMEWTSSSKINALMHALIDLRKKNPNIKSLVVSQFTTFLSLIETPLRASGFV 873 Query: 87 --AFPQGRTLDKDPCTIQEWNE---GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDL 141 K +IQ + G ++ + G GLNL + + W+ Sbjct: 874 FTRLDGSMAQKKRVESIQCFQNTEAGSPTIMLLSLKAGGVGLNL-SAASRVFLMDPAWNP 932 Query: 142 EEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQ 191 Q +R + G K+ V + I +++++E +L+ TK + Sbjct: 933 AAEDQCFDRC-----HRLGQKQEVIITKFIVKDSVEENMLKIQNTKRELA 977 >gi|256378168|ref|YP_003101828.1| SNF2-related protein [Actinosynnema mirum DSM 43827] gi|255922471|gb|ACU37982.1| SNF2-related protein [Actinosynnema mirum DSM 43827] Length = 885 Score = 82.7 bits (203), Expect = 3e-14, Method: Composition-based stats. Identities = 31/154 (20%), Positives = 62/154 (40%), Gaps = 17/154 (11%) Query: 51 VHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQKAFPQ--------GRTLDKDPCT 100 V K++ L+ I+ +A N +IV ++ + L + A P + Sbjct: 698 VKSVKLQRLKEIVAEAEENERKVIVFSNYRAVLDLVANALPGEVFGPLTGAVPPARRQQV 757 Query: 101 IQEWNEGKI-PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQA 159 + ++ + +L A + G GLN+Q +++V Q I R + Sbjct: 758 VDGFSSAEHGAVLVAQIVAGGVGLNIQ-AASVVVICEPQLKPTTEAQAIAR-----AHRM 811 Query: 160 GFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDL 193 G R V V+ L+++ +D + + L K+ + D Sbjct: 812 GQVRTVQVHRLLSEEGVDRRITELLARKAKLFDE 845 >gi|145539934|ref|XP_001455657.1| hypothetical protein [Paramecium tetraurelia strain d4-2] gi|124423465|emb|CAK88260.1| unnamed protein product [Paramecium tetraurelia] Length = 1292 Score = 82.7 bits (203), Expect = 3e-14, Method: Composition-based stats. Identities = 37/221 (16%), Positives = 82/221 (37%), Gaps = 31/221 (14%) Query: 1 MKQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANG---AVYY----DEEKHWKEVHD 53 ++ Y K + D + +A N + + + N Y +E+ Sbjct: 659 LRNYEKLK---VLDQKKGASKA-NLLNILMSLRLVCNHPYLFTYKREFPNEDIDEMINQS 714 Query: 54 EKIKALEVIIEKANA--APIIVAYHFNSDLARLQ----------KAFPQGRTLDKDPCTI 101 K+K ++ II + +++ F L +Q + ++ I Sbjct: 715 NKLKFVDRIIPRLLEMQHKMLIFSQFTMMLDLMQHYLQLRGYSYERLDGTTSIMDRQRII 774 Query: 102 QEWNE--GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQA 159 +N GK + + G G+NL + ++F ++ Q I R + Sbjct: 775 DSFNNSTGKSKIFLLSTRAGGLGINLT-SADTIIFTDSDFNPYRDLQAISR-----AHRM 828 Query: 160 GFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKK 200 G V V+ L+++ T +E ++Q K ++++++N + K Sbjct: 829 GQTNKVKVFRLVSKYTAEERIIQIATKKLLLEEIIINPINK 869 >gi|313247391|emb|CBY15642.1| unnamed protein product [Oikopleura dioica] Length = 1498 Score = 82.7 bits (203), Expect = 3e-14, Method: Composition-based stats. Identities = 29/182 (15%), Positives = 64/182 (35%), Gaps = 20/182 (10%) Query: 28 KTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQ 85 KC + A E + K+ ++ +++K +++ L L+ Sbjct: 680 LNDKCSESAARLSNNAFEGSELTANCGKLLLMQKMLKKLKEQGHRVLIFSQMTKLLDLLE 739 Query: 86 ----------KAFPQGRTLDKDPCTIQEWNEG--KIPLLFAHPASCGHGLNLQYGGNILV 133 + T I +N+ + + + G G+NL + ++ Sbjct: 740 DYLEYEQYKYERIDGSVTGSIRQQAIDRFNKPGSESFIFLLSTRAGGLGINL-ATADTVI 798 Query: 134 FFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDL 193 + W+ Q +R + G K V +Y + QN+++E V Q + K + L Sbjct: 799 IYDSDWNPHNDIQA-----FSRAHRIGQKNKVLIYRFVTQNSVEERVAQVAKKKMMLNHL 853 Query: 194 LL 195 ++ Sbjct: 854 VI 855 >gi|297672219|ref|XP_002814205.1| PREDICTED: helicase-like transcription factor-like [Pongo abelii] Length = 1009 Score = 82.7 bits (203), Expect = 3e-14, Method: Composition-based stats. Identities = 27/163 (16%), Positives = 56/163 (34%), Gaps = 19/163 (11%) Query: 42 YDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQ----------KAFPQG 91 D E + + AL + +K +V F + L+ ++ Sbjct: 825 SDMEWTSSSKINALMHALTDLRKKNPNIKSLVVSQFTTFLSLIEIPLKASGFVFTRLDGS 884 Query: 92 RTLDKDPCTIQEWNE---GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMI 148 K +IQ + G ++ + G GLNL + + W+ Q Sbjct: 885 MAQKKRVESIQCFQNTEAGSPTIMLLSLKAGGVGLNL-SAASRVFLMDPAWNPAAEDQCF 943 Query: 149 ERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQ 191 +R + G K+ V + I +++++E +L+ K + Sbjct: 944 DRC-----HRLGQKQEVIITKFIVKDSVEENMLKIQNKKRELA 981 >gi|255565329|ref|XP_002523656.1| chromodomain helicase DNA binding protein, putative [Ricinus communis] gi|223537108|gb|EEF38742.1| chromodomain helicase DNA binding protein, putative [Ricinus communis] Length = 2257 Score = 82.7 bits (203), Expect = 3e-14, Method: Composition-based stats. Identities = 26/160 (16%), Positives = 59/160 (36%), Gaps = 21/160 (13%) Query: 52 HDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQ------------KAFPQGRTLDKD 97 K+ L +++ +++ L L+ + ++ Sbjct: 984 ASAKLTVLHSMLKALYKEGHRVLIFSQMTKLLDVLEDYLTIEFGPKTYERVDGSVSVSDR 1043 Query: 98 PCTIQEWNEGKIP-LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 +I +N+ K + SCG G+NL + +V + ++ Q + R Sbjct: 1044 QASISRFNQDKSRFVFLLSTRSCGLGINL-ATADTVVIYDSDFNPHADIQAMNR-----A 1097 Query: 157 RQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + G + VY L+ + +++E +LQ + K + L +N Sbjct: 1098 HRIGQSNRLLVYRLVVRASVEERILQLAKKKLMLDQLFVN 1137 >gi|255081825|ref|XP_002508131.1| SNF2 super family [Micromonas sp. RCC299] gi|226523407|gb|ACO69389.1| SNF2 super family [Micromonas sp. RCC299] Length = 2064 Score = 82.7 bits (203), Expect = 3e-14, Method: Composition-based stats. Identities = 24/117 (20%), Positives = 47/117 (40%), Gaps = 8/117 (6%) Query: 86 KAFPQGRTLDKDPCTIQEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEE 143 G L I ++N LL + G G+NL + +V + ++ Sbjct: 942 GRIDGGTPLADRQRVIVDFNTPGSDTFLLLISTRAGGQGVNL-ATADTIVLYDPDFNPFI 1000 Query: 144 HQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKK 200 Q +R + G R V VY L+ T++E ++ ++K I+ L++ ++ Sbjct: 1001 DSQA-----QSRAHRMGQTREVAVYQLVTAKTVEEKIVSMAKSKLAIERLVVKDVRA 1052 >gi|145522560|ref|XP_001447124.1| hypothetical protein [Paramecium tetraurelia strain d4-2] gi|124414624|emb|CAK79727.1| unnamed protein product [Paramecium tetraurelia] Length = 1013 Score = 82.7 bits (203), Expect = 3e-14, Method: Composition-based stats. Identities = 27/165 (16%), Positives = 61/165 (36%), Gaps = 23/165 (13%) Query: 53 DEKIKALEVIIEKANAAPIIVAYHFNSDLARLQK----------AFPQGRTLDKDPCTIQ 102 D+ +K L I++ F S L L+ + + I Sbjct: 453 DKFLKKLSE-----GQHQILIFSQFTSMLNILEDYCNFRGFLYCRIDGETEIQQRDDQIA 507 Query: 103 EWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 E+ K + + G G+NL + ++ + ++ + Q ++R + G Sbjct: 508 EFTSPNSKKFIFLLSTRAGGLGINL-ATADTVIIYDSDFNPQMDMQAMDR-----AHRIG 561 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIHV 205 K V VY + ++T++E +++R + K L++ + + Sbjct: 562 QKNRVMVYRMACEHTVEEKIIERQQIKLRWDSLMIQQGRLQQKQT 606 >gi|20072056|gb|AAH26672.1| Smarca4 protein [Mus musculus] Length = 749 Score = 82.7 bits (203), Expect = 3e-14, Method: Composition-based stats. Identities = 30/160 (18%), Positives = 62/160 (38%), Gaps = 20/160 (12%) Query: 52 HDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAF---------PQGRTLDKDPCT 100 K + L+ I+ +A +++ S + ++ F G T +D Sbjct: 214 ASGKFELLDRILPKLRATNHKVLLFCQMTSLMTIMEDYFAYRGFKYLRLDGTTKAEDRGM 273 Query: 101 I-QEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 + + +NE + + + G GLNLQ + ++ F W+ + Q R Sbjct: 274 LLKTFNEPGSEYFIFLLSTRAGGLGLNLQ-SADTVIIFDSDWNPHQDLQA-----QDRAH 327 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + G + V V L N+++E +L + K + ++ A Sbjct: 328 RIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQA 367 >gi|116197985|ref|XP_001224804.1| hypothetical protein CHGG_07148 [Chaetomium globosum CBS 148.51] gi|88178427|gb|EAQ85895.1| hypothetical protein CHGG_07148 [Chaetomium globosum CBS 148.51] Length = 969 Score = 82.7 bits (203), Expect = 3e-14, Method: Composition-based stats. Identities = 24/150 (16%), Positives = 49/150 (32%), Gaps = 17/150 (11%) Query: 59 LEVIIEKANAAPIIVAYHFNSDLA----RLQKAFPQGRTLDKDPCTIQEW-------NEG 107 L + + I+ F + L RL +A LD Q Sbjct: 806 LHKLRSDNASHKSIIFSQFTTMLQLIEWRLHRAGITTVMLDGSMTPAQRQASIQHFMTNV 865 Query: 108 KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFV 167 + + + G LNL + + WW+ Q +R + G R + Sbjct: 866 NVEVFLVSLKAGGVALNLTEASRVFI-VDPWWNPAAEWQSADRC-----HRIGQTRPCTI 919 Query: 168 YYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 L +++++ ++ K+ + + +NA Sbjct: 920 TRLCIEDSVESRMVLLQEKKTNMINSTINA 949 >gi|224145833|ref|XP_002325780.1| chromatin remodeling complex subunit [Populus trichocarpa] gi|222862655|gb|EEF00162.1| chromatin remodeling complex subunit [Populus trichocarpa] Length = 495 Score = 82.7 bits (203), Expect = 3e-14, Method: Composition-based stats. Identities = 31/178 (17%), Positives = 62/178 (34%), Gaps = 31/178 (17%) Query: 44 EEKHWKEVHDEKIKALEVI--IEKANAAPIIVAYHFNSDLARLQ---------------- 85 E + + K+ L I + +V L ++ Sbjct: 103 ENNYKVIDYSGKMVLLLDILVMSSNVGDKTLVFSQSIPTLDLIELYLSRLTRHGKKGKFW 162 Query: 86 ---KAFPQGRTLDKDPC-TIQEWNEGK---IPLLFAHPASCGHGLNLQYGGNILVFFSLW 138 K + GRT + ++ +N+ + + + G+NL Y N ++ Sbjct: 163 RKGKDWLDGRTESSERQRLVERFNDPENKRVKCTLISTRAGSLGINL-YAANRVIIVDGS 221 Query: 139 WDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 W+ Q I R + G + VF Y L+A T++E + +R TK + +++ Sbjct: 222 WNPTYDLQAI-----YRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVD 274 >gi|167535991|ref|XP_001749668.1| hypothetical protein [Monosiga brevicollis MX1] gi|163771816|gb|EDQ85477.1| predicted protein [Monosiga brevicollis MX1] Length = 1317 Score = 82.7 bits (203), Expect = 3e-14, Method: Composition-based stats. Identities = 38/185 (20%), Positives = 66/185 (35%), Gaps = 34/185 (18%) Query: 28 KTVKCLQLANGAVYYDE-------------EKHWKEVHDEKIKALEVIIEKANAA----P 70 K +LA A DE K + D KI+AL + ++ A Sbjct: 1047 KLNGLKRLATAADQSDEAASGDAPGAKRAKTAVAKVLFDSKIQALLMTLDAIWAREPLAK 1106 Query: 71 IIVAYHFNSDL----ARLQKAFPQGRTLDKDPCTIQEWN-------EGKIPLLFAHPASC 119 ++V F++ L RL++ + TL Q N + + + Sbjct: 1107 VLVFSQFSNTLTMVGERLKRRHLKFATLVGSMERTQRTNALAGFAKDPSTNVFLLSTRAG 1166 Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 G+NL N +V + QQ I R+ + G R V V+ L+ +++ID Sbjct: 1167 AVGINLTE-ANHVVLMDPCVNPATEQQAIGRV-----HRLGQTRPVHVHRLLMRHSIDTR 1220 Query: 180 VLQRL 184 + + Sbjct: 1221 IARLR 1225 >gi|159897832|ref|YP_001544079.1| helicase domain-containing protein [Herpetosiphon aurantiacus ATCC 23779] gi|159890871|gb|ABX03951.1| helicase domain protein [Herpetosiphon aurantiacus ATCC 23779] Length = 669 Score = 82.3 bits (202), Expect = 3e-14, Method: Composition-based stats. Identities = 39/152 (25%), Positives = 65/152 (42%), Gaps = 18/152 (11%) Query: 54 EKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLD----------KDPCTIQE 103 K + L II K + + IIV F + L L+ + ++ Sbjct: 459 SKARTLLKII-KNDDSKIIVYTEFVATLEFLRDFLVDHGVESVLFHGGLSGMQKRNAVER 517 Query: 104 WNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKR 163 + +GK + S G GLNLQ+ + LV + L W+ +Q I R+ + G +R Sbjct: 518 FRDGKAQVFL-STESGGQGLNLQF-CHRLVNYDLPWNPMRIEQRIGRV-----HRYGQER 570 Query: 164 AVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 V +Y LI + TI+E +L L K + ++ Sbjct: 571 PVEIYTLILRGTIEEYILHVLTGKIDMFQTVI 602 >gi|85540717|sp|Q4WVM1|RAD5_ASPFU RecName: Full=DNA repair protein rad5 Length = 1245 Score = 82.3 bits (202), Expect = 3e-14, Method: Composition-based stats. Identities = 36/188 (19%), Positives = 54/188 (28%), Gaps = 54/188 (28%) Query: 52 HDEKIKALEVIIEKANAAPI----IVAYHFNSDLARLQKAFPQGRT----------LDKD 97 KI AL I N P +V F S L + + Sbjct: 1041 TSAKIHAL---INHLNRVPANTKSVVFSQFTSFLDLIGAQLTKAGISYVRLDGTMPQKAR 1097 Query: 98 PCTIQEWNE--------------GKIP-----------------LLFAHPASCGHGLNLQ 126 + E+N P +L + G GLNL Sbjct: 1098 AEVLAEFNRTETFHQEEIDEDEGPDTPRVRISSKNSRSSPKSPAVLLISLRAGGVGLNLT 1157 Query: 127 YGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRT 186 N+ + WW Q I+R+ + G R V V I +++I+ +L+ Sbjct: 1158 AASNVFMM-DPWWSFAIEAQAIDRV-----HRMGQLRDVSVTRFIVKDSIEGRMLRVQER 1211 Query: 187 KSTIQDLL 194 K I L Sbjct: 1212 KMNIAGSL 1219 >gi|70997286|ref|XP_753393.1| DNA excision repair protein (Rad5) [Aspergillus fumigatus Af293] gi|66851029|gb|EAL91355.1| DNA excision repair protein (Rad5), putative [Aspergillus fumigatus Af293] gi|159126880|gb|EDP51996.1| DNA excision repair protein (Rad5), putative [Aspergillus fumigatus A1163] Length = 1301 Score = 82.3 bits (202), Expect = 3e-14, Method: Composition-based stats. Identities = 36/188 (19%), Positives = 54/188 (28%), Gaps = 54/188 (28%) Query: 52 HDEKIKALEVIIEKANAAPI----IVAYHFNSDLARLQKAFPQGRT----------LDKD 97 KI AL I N P +V F S L + + Sbjct: 1097 TSAKIHAL---INHLNRVPANTKSVVFSQFTSFLDLIGAQLTKAGISYVRLDGTMPQKAR 1153 Query: 98 PCTIQEWNE--------------GKIP-----------------LLFAHPASCGHGLNLQ 126 + E+N P +L + G GLNL Sbjct: 1154 AEVLAEFNRTETFHQEEIDEDEGPDTPRVRISSKNSRSSPKSPAVLLISLRAGGVGLNLT 1213 Query: 127 YGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRT 186 N+ + WW Q I+R+ + G R V V I +++I+ +L+ Sbjct: 1214 AASNVFMM-DPWWSFAIEAQAIDRV-----HRMGQLRDVSVTRFIVKDSIEGRMLRVQER 1267 Query: 187 KSTIQDLL 194 K I L Sbjct: 1268 KMNIAGSL 1275 >gi|167773597|gb|ABZ92233.1| helicase-like transcription factor [synthetic construct] Length = 1008 Score = 82.3 bits (202), Expect = 3e-14, Method: Composition-based stats. Identities = 27/163 (16%), Positives = 56/163 (34%), Gaps = 19/163 (11%) Query: 42 YDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQ----------KAFPQG 91 D E + + AL + +K +V F + L+ ++ Sbjct: 824 SDMEWTSSSKINALMHALTDLRKKNPNIKSLVVSQFTTFLSLIEIPLKASGFVFTRLDGS 883 Query: 92 RTLDKDPCTIQEWNE---GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMI 148 K +IQ + G ++ + G GLNL + + W+ Q Sbjct: 884 MAQKKRVESIQCFQNTEAGSPTIMLLSLKAGGVGLNL-SAASRVFLMDPAWNPAAEDQCF 942 Query: 149 ERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQ 191 +R + G K+ V + I +++++E +L+ K + Sbjct: 943 DRC-----HRLGQKQEVIITKFIVKDSVEENMLKIQNKKRELA 980 >gi|54025735|ref|YP_119977.1| putative helicase [Nocardia farcinica IFM 10152] gi|54017243|dbj|BAD58613.1| putative helicase [Nocardia farcinica IFM 10152] Length = 575 Score = 82.3 bits (202), Expect = 3e-14, Method: Composition-based stats. Identities = 36/207 (17%), Positives = 64/207 (30%), Gaps = 21/207 (10%) Query: 2 KQYHKFQRELYCD-LQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 + Y + D + Q+ N E K+ Sbjct: 348 RVYDTLLQRAVDDGFGAGPQRQSRVLAALTALKQVCNHPGLVTGELDELAGRSGKLDLCT 407 Query: 61 VIIEKA--NAAPIIVAYHFNSDLARLQKA-----------FPQGRTLDKDPCTIQEWNEG 107 I+ NAAP ++ + L + F G + ++++ Sbjct: 408 DIVAANLDNAAPTLIFTQYRGTGELLVRHLREQFGLAAPFFHGGLNQTERARIVRDFQSP 467 Query: 108 K-IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVF 166 P+L + G GL L + ++ F WW+ Q +R + G R V Sbjct: 468 DGPPVLVLSLRAAGTGLTLTRAAD-VIHFDRWWNPAVEAQASDR-----AHRIGQTRTVT 521 Query: 167 VYYLIAQNTIDELVLQRLRTKSTIQDL 193 V L + T++E + KS + DL Sbjct: 522 VTTLTSGTTVEEHIAGMHDRKSALTDL 548 >gi|255954695|ref|XP_002568100.1| Pc21g10680 [Penicillium chrysogenum Wisconsin 54-1255] gi|211589811|emb|CAP95965.1| Pc21g10680 [Penicillium chrysogenum Wisconsin 54-1255] Length = 943 Score = 82.3 bits (202), Expect = 3e-14, Method: Composition-based stats. Identities = 36/180 (20%), Positives = 67/180 (37%), Gaps = 28/180 (15%) Query: 42 YDEEKHWKE-----VHDEKIKALE----VIIEKANAAPIIVAYHFNSDLARLQ-----KA 87 +EE W + KI A+ +++ I++ F + LQ + Sbjct: 721 SEEEGDWISRVGDRMPSAKITAVRGLVSDWVKEDEEVKIVIFVQFLKTVQLLQLMCEKEG 780 Query: 88 FP------QGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDL 141 + + + +D Q E I ++ + + G GLNL N + WW+ Sbjct: 781 WKYAVITGKVSPISRDKQIEQFSKEKDIKVMISSLRTGGVGLNLTM-ANKCILMDPWWNE 839 Query: 142 EEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL--NALK 199 Q R+ + G R V ++A+ +ID +++ + K+ D L ALK Sbjct: 840 AIQNQAYCRL-----YRIGQPRPVEYVQVVAKVSIDSWMMRLQKEKTRNIDRLFSKEALK 894 >gi|157108129|ref|XP_001650090.1| helicase [Aedes aegypti] gi|108879397|gb|EAT43622.1| helicase [Aedes aegypti] Length = 1455 Score = 82.3 bits (202), Expect = 3e-14, Method: Composition-based stats. Identities = 29/160 (18%), Positives = 63/160 (39%), Gaps = 20/160 (12%) Query: 52 HDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQ---------KAFPQGRTLDKDPCT 100 K + L+ I+ K A+ +++ + ++ G T ++ Sbjct: 929 ASGKFELLDRILPKLKASGHRVLLFCQMTQCMTIIEDYLSWRGFGYLRLDGTTKAEERGD 988 Query: 101 I-QEWN--EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 + +++N + + + G GLNLQ + +V F W+ + Q R Sbjct: 989 LLKKFNCKNSEYFVFLLSTRAGGLGLNLQT-ADTVVIFDSDWNPHQDLQA-----QDRAH 1042 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + G + V V L+ N+++E +L R K + + ++ A Sbjct: 1043 RIGQRNEVRVLRLMTVNSVEERILAAARYKLNMDEKVIQA 1082 >gi|85102654|ref|XP_961377.1| DNA repair protein RAD16 [Neurospora crassa OR74A] gi|16944468|emb|CAC18166.2| probable nucleotide exsicion repair protein RAD16 [Neurospora crassa] gi|28922921|gb|EAA32141.1| DNA repair protein RAD16 [Neurospora crassa OR74A] Length = 1079 Score = 82.3 bits (202), Expect = 3e-14, Method: Composition-based stats. Identities = 24/150 (16%), Positives = 49/150 (32%), Gaps = 17/150 (11%) Query: 59 LEVIIEKANAAPIIVAYHFNSDLA----RLQKAFPQGRTLDKDPCTIQEW-------NEG 107 L + + I+ F + L RL++A LD Q Sbjct: 916 LHKLRSDNASHKSIIFSQFTTMLQLIEWRLRRAGITTVMLDGSMTPAQRQASINHFMTNV 975 Query: 108 KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFV 167 + + G LNL + + WW+ Q +R + G R + Sbjct: 976 DVECFLVSLKAGGVALNLTEASRVFI-VDPWWNPAAEWQSADRC-----HRIGQSRPCTI 1029 Query: 168 YYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 L +++++ ++ K+ + + +NA Sbjct: 1030 TRLCIEDSVESRMVLLQEKKTNMINSTINA 1059 >gi|301783337|ref|XP_002927083.1| PREDICTED: helicase-like transcription factor-like [Ailuropoda melanoleuca] Length = 1007 Score = 82.3 bits (202), Expect = 3e-14, Method: Composition-based stats. Identities = 29/170 (17%), Positives = 61/170 (35%), Gaps = 23/170 (13%) Query: 39 AVYYDEEKHWKEVHDEKIKALE----VIIEKANAAPIIVAYHFNSDLARLQK-------- 86 A +++ + + KI AL + +K +V F + L+ ++ Sbjct: 816 ACDTEKKSNMEWTSSSKINALMHALIDLRKKNPNIKSLVVSQFTTFLSLIETPLRASGFV 875 Query: 87 --AFPQGRTLDKDPCTIQEWNE---GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDL 141 K +IQ + G ++ + G GLNL + + W+ Sbjct: 876 FTRLDGSMAQKKRVESIQCFQNTEAGSPTIMLLSLKAGGVGLNL-SAASRVFLMDPAWNP 934 Query: 142 EEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQ 191 Q +R + G K+ V + I +++++E +L+ TK + Sbjct: 935 AAEDQCFDRC-----HRLGQKQEVIITKFIVKDSVEENMLKIQNTKRELA 979 >gi|158255898|dbj|BAF83920.1| unnamed protein product [Homo sapiens] Length = 1009 Score = 82.3 bits (202), Expect = 3e-14, Method: Composition-based stats. Identities = 27/163 (16%), Positives = 56/163 (34%), Gaps = 19/163 (11%) Query: 42 YDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQ----------KAFPQG 91 D E + + AL + +K +V F + L+ ++ Sbjct: 825 SDMEWTSSSKINALMHALTDLRKKNPNIKSLVVSQFTTFLSLIEIPLKASGFVFTRLDGS 884 Query: 92 RTLDKDPCTIQEWNE---GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMI 148 K +IQ + G ++ + G GLNL + + W+ Q Sbjct: 885 MAQKKRVESIQCFQNTEAGSPTIMLLSLKAGGVGLNL-SAASRVFLMDPAWNPAAEDQCF 943 Query: 149 ERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQ 191 +R + G K+ V + I +++++E +L+ K + Sbjct: 944 DRC-----HRLGQKQEVIITKFIVKDSVEENMLKIQNKKRELA 981 >gi|27882409|gb|AAH44659.1| Helicase-like transcription factor [Homo sapiens] gi|119599297|gb|EAW78891.1| SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 3, isoform CRA_c [Homo sapiens] Length = 1008 Score = 82.3 bits (202), Expect = 3e-14, Method: Composition-based stats. Identities = 27/163 (16%), Positives = 56/163 (34%), Gaps = 19/163 (11%) Query: 42 YDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQ----------KAFPQG 91 D E + + AL + +K +V F + L+ ++ Sbjct: 824 SDMEWTSSSKINALMHALTDLRKKNPNIKSLVVSQFTTFLSLIEIPLKASGFVFTRLDGS 883 Query: 92 RTLDKDPCTIQEWNE---GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMI 148 K +IQ + G ++ + G GLNL + + W+ Q Sbjct: 884 MAQKKRVESIQCFQNTEAGSPTIMLLSLKAGGVGLNL-SAASRVFLMDPAWNPAAEDQCF 942 Query: 149 ERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQ 191 +R + G K+ V + I +++++E +L+ K + Sbjct: 943 DRC-----HRLGQKQEVIITKFIVKDSVEENMLKIQNKKRELA 980 >gi|21071052|ref|NP_003062.2| helicase-like transcription factor [Homo sapiens] gi|21071054|ref|NP_620636.1| helicase-like transcription factor [Homo sapiens] gi|60390864|sp|Q14527|HLTF_HUMAN RecName: Full=Helicase-like transcription factor; AltName: Full=DNA-binding protein/plasminogen activator inhibitor 1 regulator; AltName: Full=HIP116; AltName: Full=RING finger protein 80; AltName: Full=SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 3; AltName: Full=Sucrose nonfermenting protein 2-like 3 gi|119599295|gb|EAW78889.1| SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 3, isoform CRA_a [Homo sapiens] gi|119599298|gb|EAW78892.1| SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 3, isoform CRA_a [Homo sapiens] gi|119599299|gb|EAW78893.1| SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 3, isoform CRA_a [Homo sapiens] Length = 1009 Score = 82.3 bits (202), Expect = 3e-14, Method: Composition-based stats. Identities = 27/163 (16%), Positives = 56/163 (34%), Gaps = 19/163 (11%) Query: 42 YDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQ----------KAFPQG 91 D E + + AL + +K +V F + L+ ++ Sbjct: 825 SDMEWTSSSKINALMHALTDLRKKNPNIKSLVVSQFTTFLSLIEIPLKASGFVFTRLDGS 884 Query: 92 RTLDKDPCTIQEWNE---GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMI 148 K +IQ + G ++ + G GLNL + + W+ Q Sbjct: 885 MAQKKRVESIQCFQNTEAGSPTIMLLSLKAGGVGLNL-SAASRVFLMDPAWNPAAEDQCF 943 Query: 149 ERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQ 191 +R + G K+ V + I +++++E +L+ K + Sbjct: 944 DRC-----HRLGQKQEVIITKFIVKDSVEENMLKIQNKKRELA 981 >gi|328773098|gb|EGF83135.1| hypothetical protein BATDEDRAFT_7470 [Batrachochytrium dendrobatidis JAM81] Length = 104 Score = 82.3 bits (202), Expect = 3e-14, Method: Composition-based stats. Identities = 24/83 (28%), Positives = 40/83 (48%), Gaps = 6/83 (7%) Query: 109 IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVY 168 I ++ G GLNL +++ LWW+ Q I+R+ + G + V V Sbjct: 4 ISVMLVSLKCGGVGLNLSIACRVII-CDLWWNPAVEDQAIDRV-----HRIGQRVDVRVS 57 Query: 169 YLIAQNTIDELVLQRLRTKSTIQ 191 YL+A++TI+E +L +K I Sbjct: 58 YLVAKDTIEERILIMQESKRQIA 80 >gi|126540715|emb|CAM46170.1| chromodomain helicase DNA binding protein 6 [Mus musculus] Length = 1184 Score = 82.3 bits (202), Expect = 3e-14, Method: Composition-based stats. Identities = 25/149 (16%), Positives = 52/149 (34%), Gaps = 18/149 (12%) Query: 66 ANAAPIIVAYHFNSDLARLQKAFPQGR-TLDK---------DPCTIQEWNEGKIP--LLF 113 A +++ L L+ Q R T ++ I + + + Sbjct: 795 AGGHKVLIFSQMVRCLDILEDYLIQRRYTYERIDGRVRGNLRQAAIDRFCKPDSDRFVFL 854 Query: 114 AHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQ 173 + G G+NL + + F W+ + Q R + G +AV VY LI + Sbjct: 855 LCTRAGGLGINLT-AADTCIIFDSDWNPQNDLQAQARC-----HRIGQSKAVKVYRLITR 908 Query: 174 NTIDELVLQRLRTKSTIQDLLLNALKKET 202 N+ + + + K + +L + ++ Sbjct: 909 NSYEREMFDKASLKLGLDKAILQDINRKG 937 >gi|531196|gb|AAA67436.1| ATPase [Homo sapiens] Length = 1009 Score = 82.3 bits (202), Expect = 3e-14, Method: Composition-based stats. Identities = 27/163 (16%), Positives = 56/163 (34%), Gaps = 19/163 (11%) Query: 42 YDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQ----------KAFPQG 91 D E + + AL + +K +V F + L+ ++ Sbjct: 825 SDMEWTSSSKINALMHALTDLRKKNPNIKSLVVSQFTTFLSLIEIPLKASGFVFTRLDGS 884 Query: 92 RTLDKDPCTIQEWNE---GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMI 148 K +IQ + G ++ + G GLNL + + W+ Q Sbjct: 885 MAQKKRVESIQCFQNTEAGSPTIMLLSLKAGGVGLNL-SAASRVFLMDPAWNPAAEDQCF 943 Query: 149 ERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQ 191 +R + G K+ V + I +++++E +L+ K + Sbjct: 944 DRC-----HRLGQKQEVIITKFIVKDSVEENMLKIQNKKRELA 981 >gi|253573375|ref|ZP_04850718.1| helicase protein [Paenibacillus sp. oral taxon 786 str. D14] gi|251846903|gb|EES74908.1| helicase protein [Paenibacillus sp. oral taxon 786 str. D14] Length = 592 Score = 82.3 bits (202), Expect = 3e-14, Method: Composition-based stats. Identities = 32/153 (20%), Positives = 66/153 (43%), Gaps = 17/153 (11%) Query: 52 HDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAF--------PQGRTLDKDPCT-IQ 102 + K + +I + N +IV + + L K F P +++ + Sbjct: 378 ANSKAEKAMELIREMNDK-VIVFTEYRATQEYLLKYFRERGMTAVPYRGGMNRGKKDWMM 436 Query: 103 EWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFK 162 + G+ ++ A + G G+NLQ+ + ++ F L W+ +Q I R+ + G Sbjct: 437 DLFRGRAQVMIA-TEAGGEGINLQF-CHQMINFDLPWNPMRVEQRIGRV-----HRLGQT 489 Query: 163 RAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 V +Y L + TI+E +L L K + ++++ Sbjct: 490 NDVHIYNLSTKGTIEEHILHLLHEKINMFEMVI 522 >gi|163955122|ref|YP_001648226.1| hypothetical protein OsV5_149f [Ostreococcus virus OsV5] gi|163638571|gb|ABY27930.1| hypothetical protein OsV5_149f [Ostreococcus virus OsV5] Length = 480 Score = 82.3 bits (202), Expect = 3e-14, Method: Composition-based stats. Identities = 34/162 (20%), Positives = 61/162 (37%), Gaps = 19/162 (11%) Query: 53 DEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAF--PQGRTLDKDPCTIQEWNEG--- 107 K++ L +I+ +V F ++ +Q+ P R P ++ Sbjct: 302 SNKMETLFRMIKSHPDEKTLVFCQFRGEMDFIQQNMECPTFRIDGSVPKEERDNQVNAFK 361 Query: 108 KIP---LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA 164 K P + S G GLNLQ + + W+ Q+I R + G + Sbjct: 362 KAPPGAVFIIQIKSGGQGLNLQEATRVYI-TGPSWNPATELQVIGR-----AHRTGQTKP 415 Query: 165 VFVYYLIAQN-----TIDELVLQRLRTKSTIQDLLLNALKKE 201 V+V LI + +++E +L KS + +LN + E Sbjct: 416 VYVKKLIYKEGDGFISVEEEILALQGHKSIVCSKVLNDERIE 457 >gi|319642264|ref|ZP_07996923.1| helicase domain-containing protein [Bacteroides sp. 3_1_40A] gi|317386120|gb|EFV67040.1| helicase domain-containing protein [Bacteroides sp. 3_1_40A] Length = 559 Score = 82.3 bits (202), Expect = 3e-14, Method: Composition-based stats. Identities = 40/209 (19%), Positives = 74/209 (35%), Gaps = 35/209 (16%) Query: 2 KQYHKFQRELYC------DLQGENIEAF---NSASKTVKCLQLANGAVYYDEEKHWKEVH 52 K+Y +R+L + E IE + Q++ + Sbjct: 342 KEYIDAERDLIMYLQKYKEADDEKIEKALRGEVMVRINILRQIS-----------ARGKV 390 Query: 53 DEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQG-RTLDKDPCTIQE------WN 105 + I+ ++ E N II+ + + +L+ FP +D ++ N Sbjct: 391 RDVIEFVKDFRE--NGKKIILFCSLHEVVDQLKSYFPTAVSVTGRDSQDEKQRAVDSFQN 448 Query: 106 EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 K ++ + G GL L N + F W + Q +R + G K +V Sbjct: 449 NPKTDIIICSIKAAGVGLTLTASSN-VAFVEFPWTYADCCQCEDR-----AHRIGQKDSV 502 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 YY + + TIDE V + ++ K I + Sbjct: 503 TCYYFLGRRTIDEKVCRIIQNKKAIAKDV 531 >gi|242777640|ref|XP_002479075.1| DNA excision repair protein (Rad5), putative [Talaromyces stipitatus ATCC 10500] gi|218722694|gb|EED22112.1| DNA excision repair protein (Rad5), putative [Talaromyces stipitatus ATCC 10500] Length = 1183 Score = 82.3 bits (202), Expect = 3e-14, Method: Composition-based stats. Identities = 31/182 (17%), Positives = 56/182 (30%), Gaps = 45/182 (24%) Query: 52 HDEKIKALEV-IIEKANAAPIIVAYHFNSDLARLQKAFPQGRTL----------DKDPCT 100 KI AL +++ + +V F S L + + Sbjct: 982 TSAKIHALITHLLKLPPNSKSVVFSQFTSFLDLIGPQLTKAGLTHLRLDGSMPQKARAEV 1041 Query: 101 IQEWNEGKI----------------------------PLLFAHPASCGHGLNLQYGGNIL 132 ++++N +I +L + G GLNL N + Sbjct: 1042 LRQFNRTEIYEELESDEDAPKDGGASATHSKPPQPSPSILLISLRAGGVGLNLT-AANNV 1100 Query: 133 VFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQD 192 WW Q I+R+ + G R V V + +++I+ +L+ K I Sbjct: 1101 FMMDPWWSFAVEAQAIDRV-----HRMGQLREVSVTRFVVKDSIEVRMLRVQERKMNIAG 1155 Query: 193 LL 194 L Sbjct: 1156 SL 1157 >gi|320164103|gb|EFW41002.1| chromodomain-helicase-DNA-binding protein 1-like protein [Capsaspora owczarzaki ATCC 30864] Length = 1103 Score = 82.3 bits (202), Expect = 3e-14, Method: Composition-based stats. Identities = 22/88 (25%), Positives = 41/88 (46%), Gaps = 6/88 (6%) Query: 109 IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVY 168 + + G GLNL + ++FF ++ + Q R + G R V V Sbjct: 338 CFVFLLSTRAGGLGLNL-VSADTVIFFDSDFNPQADLQAAAR-----AHRLGQTRPVRVI 391 Query: 169 YLIAQNTIDELVLQRLRTKSTIQDLLLN 196 L+AQ+T++E+VL+R + K + ++ Sbjct: 392 RLVAQHTVEEIVLRRAQRKLELTHAVIQ 419 >gi|73990698|ref|XP_534300.2| PREDICTED: similar to SWI/SNF-related matrix-associated actin-dependent regulator of chromatin a3 [Canis familiaris] Length = 1106 Score = 82.3 bits (202), Expect = 3e-14, Method: Composition-based stats. Identities = 29/170 (17%), Positives = 61/170 (35%), Gaps = 23/170 (13%) Query: 39 AVYYDEEKHWKEVHDEKIKALE----VIIEKANAAPIIVAYHFNSDLARLQK-------- 86 A +++ + + KI AL + +K +V F + L+ ++ Sbjct: 915 ACDTEKKSNTEWTSSSKINALMHALIDLRKKNPNIKSLVVSQFTTFLSLIETPLRASGFV 974 Query: 87 --AFPQGRTLDKDPCTIQEWNE---GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDL 141 K +IQ + G ++ + G GLNL + + W+ Sbjct: 975 FTRLDGSMAQKKRVESIQCFQNTEAGSPTIMLLSLKAGGVGLNL-SAASRVFLMDPAWNP 1033 Query: 142 EEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQ 191 Q +R + G K+ V + I +++++E +L+ TK + Sbjct: 1034 AAEDQCFDRC-----HRLGQKQEVIITKFIVKDSVEENMLKIQNTKRELA 1078 >gi|39965277|ref|XP_365085.1| hypothetical protein MGG_09930 [Magnaporthe oryzae 70-15] gi|145013168|gb|EDJ97809.1| hypothetical protein MGG_09930 [Magnaporthe oryzae 70-15] Length = 941 Score = 82.3 bits (202), Expect = 4e-14, Method: Composition-based stats. Identities = 33/164 (20%), Positives = 64/164 (39%), Gaps = 21/164 (12%) Query: 44 EEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRT-------- 93 E+ W E K++ L ++ + N ++ F + L + Sbjct: 753 EKDSWME--SGKVQKLLELLRQFRKNGDRALIFTRFAKVIEILTECLSTAEVPHLTFQGS 810 Query: 94 --LDKDPCTIQEWNEGK-IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 +D I E+NE K + + G G+NL N ++ F + ++ Q Sbjct: 811 TAVDMRQDLIDEFNENKDLTAFLLTTGAGGTGINL-ASANKVIIFDQSDNPQDDVQA--- 866 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 R + G R V V LI++++I+ELV + + K + + + Sbjct: 867 --ENRAHRFGQTRPVEVIRLISRDSIEELVYKACQKKLELANRV 908 >gi|118401967|ref|XP_001033303.1| SNF2 family N-terminal domain containing protein [Tetrahymena thermophila] gi|89287651|gb|EAR85640.1| SNF2 family N-terminal domain containing protein [Tetrahymena thermophila SB210] Length = 1040 Score = 82.3 bits (202), Expect = 4e-14, Method: Composition-based stats. Identities = 37/150 (24%), Positives = 63/150 (42%), Gaps = 9/150 (6%) Query: 49 KEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGK 108 K +K K+L + A ++ A D ++ ++ Q D + N + Sbjct: 881 KLTKSQKQKSLYHFENQTTNADLLQASTLKEDSSQQEQTMGQEEQYDNSNQNQE--NTSQ 938 Query: 109 IP-LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFV 167 P +L A S GLNL G N L+ WW+ Q I RI + G ++ ++ Sbjct: 939 TPTVLLASLMSGYVGLNLT-GANNLILCDSWWNPAVEDQAINRI-----HRLGQQKQTYI 992 Query: 168 YYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 Y +I ++TI+E + Q K I + N+ Sbjct: 993 YKMICKDTIEEKIQQINDQKRDIFQTIFNS 1022 >gi|302819025|ref|XP_002991184.1| hypothetical protein SELMODRAFT_429540 [Selaginella moellendorffii] gi|300141012|gb|EFJ07728.1| hypothetical protein SELMODRAFT_429540 [Selaginella moellendorffii] Length = 1524 Score = 82.3 bits (202), Expect = 4e-14, Method: Composition-based stats. Identities = 27/127 (21%), Positives = 50/127 (39%), Gaps = 17/127 (13%) Query: 69 APIIVAYHFNSDLA----RLQKAFPQGRTLD-------KDPCTIQEWNEGKIPLLFAHPA 117 +V + S L RL+KA + R LD +D + + ++ ++ Sbjct: 989 EKALVFSQWTSLLDLVEPRLEKAGLEFRRLDGTMSVMERDAAVCEFNEKPEVSVMLMGLK 1048 Query: 118 SCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 GLN+ ++L+ +WW+ Q I+R + G R V V + TI+ Sbjct: 1049 VGSLGLNMVAACHVLLL-DVWWNPTVEDQAIDR-----AHRIGQTRDVHVTRFTVKKTIE 1102 Query: 178 ELVLQRL 184 + +L Sbjct: 1103 DRILALQ 1109 >gi|194386618|dbj|BAG61119.1| unnamed protein product [Homo sapiens] Length = 1108 Score = 82.3 bits (202), Expect = 4e-14, Method: Composition-based stats. Identities = 25/146 (17%), Positives = 51/146 (34%), Gaps = 18/146 (12%) Query: 65 KANAAPIIVAYHFNSDLARLQKAFPQGRTL----------DKDPCTIQEWNEGKIP--LL 112 KA +++ L L+ R L + I +++ + Sbjct: 721 KAGGHKVLIFSQMVRCLDILEDYLIHKRYLYERIDGRVRGNLRQAAIDRFSKPDSDRFVF 780 Query: 113 FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIA 172 + G G+NL + + F W+ + Q R + G +AV VY L+ Sbjct: 781 LLCTRAGGLGINLT-AADTCIIFDSDWNPQNDLQAQARC-----HRIGQNKAVKVYRLVT 834 Query: 173 QNTIDELVLQRLRTKSTIQDLLLNAL 198 +N+ + + R K + +L ++ Sbjct: 835 RNSYEREMFDRASLKLGLDKAVLQSM 860 >gi|297286676|ref|XP_002803057.1| PREDICTED: helicase-like transcription factor-like [Macaca mulatta] Length = 932 Score = 82.3 bits (202), Expect = 4e-14, Method: Composition-based stats. Identities = 27/163 (16%), Positives = 56/163 (34%), Gaps = 19/163 (11%) Query: 42 YDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQ----------KAFPQG 91 D E + + AL + +K +V F + L+ ++ Sbjct: 748 SDMEWTSSSKINALMHALTDLRKKNPNIKSLVVSQFTTFLSLIEIPLKASGFVFTRLDGS 807 Query: 92 RTLDKDPCTIQEWNE---GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMI 148 K +IQ + G ++ + G GLNL + + W+ Q Sbjct: 808 MAQKKRVESIQCFQNTEAGSPTIMLLSLKAGGVGLNL-SAASRVFLMDPAWNPAAEDQCF 866 Query: 149 ERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQ 191 +R + G K+ V + I +++++E +L+ K + Sbjct: 867 DRC-----HRLGQKQEVIITKFIVKDSVEENMLKIQNKKRELA 904 >gi|47222924|emb|CAF99080.1| unnamed protein product [Tetraodon nigroviridis] Length = 2099 Score = 82.3 bits (202), Expect = 4e-14, Method: Composition-based stats. Identities = 37/197 (18%), Positives = 73/197 (37%), Gaps = 19/197 (9%) Query: 9 RELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIE---K 65 +E + E +E + L++A +++ + +E +E + Sbjct: 1548 KEFVTEADAEILEHSGKMMLLFEILRMAEE---VEDKVLVFSQSLISLDLIEDFLELSCR 1604 Query: 66 ANAAPIIVAY-----HFNS-DLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASC 119 A + Y F + D RL + T K + + + L + Sbjct: 1605 AKDEDKVSPYKGEGKWFRNIDYYRLDGSTS-ATTRKKWAEEFNDTSNVRGRLFLISTRAG 1663 Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 G+NL N ++ F W+ Q I R+ + G + VFVY +AQ T++E Sbjct: 1664 SLGINL-VAANRVIIFDASWNPSYDVQSIFRV-----YRFGQHKTVFVYRFLAQGTMEEK 1717 Query: 180 VLQRLRTKSTIQDLLLN 196 + R TK ++ +++ Sbjct: 1718 IYDRQVTKQSLSFRVVD 1734 >gi|32473602|ref|NP_866596.1| SNF2 family helicase [Rhodopirellula baltica SH 1] gi|32398282|emb|CAD78377.1| helicase, Snf2 family [Rhodopirellula baltica SH 1] Length = 914 Score = 82.3 bits (202), Expect = 4e-14, Method: Composition-based stats. Identities = 43/190 (22%), Positives = 79/190 (41%), Gaps = 30/190 (15%) Query: 28 KTVKCL---QLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAP---IIVAYHFNSDL 81 + KCL ++A + Y +++ + + K++ L ++E A P I++ + L Sbjct: 605 RMQKCLLMARMACDSTYLLDQEADE--YSSKLERLGELLEGLIADPTRKIVLFSEWRRML 662 Query: 82 ARLQKAFPQ---------GRTLDKDPCTI--QEWNEGKIPLLFAHPASCGHGLNLQYGGN 130 R++ Q G+ K I + N+ + + + GLNLQ N Sbjct: 663 TRVENRLDQIGCDYVRLDGQVPQKKRAAIVSRFQNDPECRV-INMTNAGSTGLNLQ-AAN 720 Query: 131 ILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQN----TIDELVLQRLRT 186 ++ L W+ +Q I R + G + V VY L+ + TI+E +L L + Sbjct: 721 TVINVDLPWNPAVLEQRIAR-----AYRMGQENPVHVYKLVTTSEPTPTIEEGLLTTLAS 775 Query: 187 KSTIQDLLLN 196 K + D LN Sbjct: 776 KQDLADASLN 785 >gi|47222591|emb|CAG02956.1| unnamed protein product [Tetraodon nigroviridis] Length = 1174 Score = 82.3 bits (202), Expect = 4e-14, Method: Composition-based stats. Identities = 33/177 (18%), Positives = 62/177 (35%), Gaps = 38/177 (21%) Query: 52 HDEKIKALEVIIEKANA--APIIVAYHFNSDLARLQKAFPQGRTLDKDPCTI-------- 101 H K+ L I+ A ++V F L +++ ++ Sbjct: 915 HSGKMVLLFKILRMAEELEEKVLVFSQFLLSLDLIERYLQTSHAATGLSSSVKVSRWEKN 974 Query: 102 -------------------QEWNEG---KIPLLFAHPASCGHGLNLQYGGNILVFFSLWW 139 E+N + LL + G+NL + +V F W Sbjct: 975 VDYFRIDGSVGPQLRKKWADEFNNAANNRCKLLLISTKAGSLGINL-VAASRVVIFDASW 1033 Query: 140 DLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + Q + R+ + G R VFVY +AQ T++E + R TK ++ + +++ Sbjct: 1034 NPSYDVQSVYRV-----YRFGQVRPVFVYRFLAQGTMEEKIYDRQVTKQSLSNRVVD 1085 >gi|258567128|ref|XP_002584308.1| hypothetical protein UREG_04997 [Uncinocarpus reesii 1704] gi|237905754|gb|EEP80155.1| hypothetical protein UREG_04997 [Uncinocarpus reesii 1704] Length = 1183 Score = 82.3 bits (202), Expect = 4e-14, Method: Composition-based stats. Identities = 22/84 (26%), Positives = 35/84 (41%), Gaps = 6/84 (7%) Query: 111 LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYL 170 +L + G GLNL N + WW Q I+R+ + G + V V Sbjct: 1081 ILLISLRAGGVGLNLT-AANHVYMMDPWWSFAVEAQAIDRV-----HRMGQLKDVKVTRF 1134 Query: 171 IAQNTIDELVLQRLRTKSTIQDLL 194 + +N+I+E +L+ K I L Sbjct: 1135 VVKNSIEERMLRVQERKMMIAGSL 1158 >gi|209876065|ref|XP_002139475.1| SNF2 family N-terminal domain-containing protein [Cryptosporidium muris RN66] gi|209555081|gb|EEA05126.1| SNF2 family N-terminal domain-containing protein [Cryptosporidium muris RN66] Length = 1923 Score = 82.3 bits (202), Expect = 4e-14, Method: Composition-based stats. Identities = 35/223 (15%), Positives = 75/223 (33%), Gaps = 30/223 (13%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSAS--------KTVKCLQLANGAVYYDEEKHWKEVHD 53 K Y + +R D + K + N + + E + Sbjct: 738 KGYEE-ERRACSDFDENEENFSSEKVFVDLYSHYMYDKEINSDNKQIKTERNDEVIENTE 796 Query: 54 E---KIKALEVIIEKANAAPIIVAYHFNSDLARL---------QKAFPQGRTLDK-DPCT 100 E K + L+ ++ +++ F L L Q G T Sbjct: 797 ENNYKSEKLDKPKKRCRMHKVLIFTQFQLILDELENYCLWRGWQYMRLDGSTNKLIRELD 856 Query: 101 IQEWNEGKIPLL--FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQ 158 I+E+ + + G G+NL N +V + W+ Q ++R + Sbjct: 857 IREFGLPDNYVFIYLICTRAGGLGINL-VSANHVVMYDEDWNPFVDLQAVDR-----AHR 910 Query: 159 AGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 G R V ++ L+ + +++E ++ K + +++ A ++E Sbjct: 911 IGQTRDVCIWKLVTEWSVEERMVFGREQKLKLDKMVIKAREEE 953 >gi|312380716|gb|EFR26634.1| hypothetical protein AND_07156 [Anopheles darlingi] Length = 1492 Score = 82.3 bits (202), Expect = 4e-14, Method: Composition-based stats. Identities = 30/160 (18%), Positives = 62/160 (38%), Gaps = 20/160 (12%) Query: 52 HDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQ---------KAFPQGRTLDKDPCT 100 K + L+ I+ K A+ +++ + ++ G T ++ Sbjct: 987 ASGKFELLDRILPKLKASGHRVLLFCQMTQCMTIIEDYLSWRGFGYLRLDGTTKSEERGD 1046 Query: 101 I-QEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 + +++N L + G GLNLQ + +V F W+ + Q R Sbjct: 1047 LLKKFNSKNSDYFLFLLSTRAGGLGLNLQT-ADTVVIFDSDWNPHQDLQA-----QDRAH 1100 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + G + V V L+ N+++E +L R K + + ++ A Sbjct: 1101 RIGQRNEVRVLRLMTVNSVEERILAAARYKLNMDEKVIQA 1140 >gi|331251008|ref|XP_003338107.1| SNF2/helicase domain-containing protein [Puccinia graminis f. sp. tritici CRL 75-36-700-3] gi|309317097|gb|EFP93688.1| SNF2/helicase domain-containing protein [Puccinia graminis f. sp. tritici CRL 75-36-700-3] Length = 712 Score = 82.3 bits (202), Expect = 4e-14, Method: Composition-based stats. Identities = 31/190 (16%), Positives = 66/190 (34%), Gaps = 28/190 (14%) Query: 16 QGENIEAFNSASKTVKCLQLANGAVYYDEE----KHWKEVHDEKIKALEVIIEK--ANAA 69 GE ++ + Q N ++ +E K+W+ K+ L +E+ Sbjct: 522 SGEPWDSTEFFKQLTMIRQFCNHPIFARDEIPHQKNWRWQDSAKLVHLVDNLERFLRGGR 581 Query: 70 PII-----VAYHFNSDLARLQKAFPQGR-----------TLDKDPCTIQEWNEGKIPLLF 113 I+ V F + L ++KA + + +D + + +L Sbjct: 582 GILRPKAVVFSSFVAFLEIIEKALKEKQMGCTWLIGTLGIAKRDENLARFRTDPNCNILL 641 Query: 114 AHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQ 173 + G G++L+ N + W+ Q ++R+ + G V VY Q Sbjct: 642 GSIQAAGVGIDLRCAQN-VYMMEPNWNPAMENQAVDRL-----YRLGQTNEVHVYRYYVQ 695 Query: 174 NTIDELVLQR 183 +++ + Q Sbjct: 696 GSLEMNIHQA 705 >gi|21356675|ref|NP_651398.1| XNP, isoform B [Drosophila melanogaster] gi|24650076|ref|NP_733107.1| XNP, isoform A [Drosophila melanogaster] gi|17366808|sp|Q9GQN5|ATRX_DROME RecName: Full=Transcriptional regulator ATRX homolog; AltName: Full=ATP-dependent helicase XNP; AltName: Full=X-linked nuclear protein; AltName: Full=d-xnp; AltName: Full=dXNP gi|7301343|gb|AAF56471.1| XNP, isoform A [Drosophila melanogaster] gi|16198065|gb|AAL13821.1| LD28477p [Drosophila melanogaster] gi|23172300|gb|AAN14055.1| XNP, isoform B [Drosophila melanogaster] gi|220947590|gb|ACL86338.1| XNP-PA [synthetic construct] Length = 1311 Score = 82.3 bits (202), Expect = 4e-14, Method: Composition-based stats. Identities = 26/134 (19%), Positives = 53/134 (39%), Gaps = 18/134 (13%) Query: 75 YHFNSDLARLQKAFPQGRTL---------DKDPCTIQEWNE---GKIPLLFAHPASCGHG 122 Y F D+ + + G+ ++ +++N + L + G G Sbjct: 944 YEFEGDVGDFKGCWTSGKDYFRLDGSCSVEQREAMCKQFNNITNLRARLFLISTRAGGLG 1003 Query: 123 LNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQ 182 +NL N +V F + W+ Q I R+ + G + ++Y LIA T+++ V + Sbjct: 1004 INL-VAANRVVIFDVSWNPSHDTQSIFRV-----YRFGQIKPCYIYRLIAMGTMEQKVYE 1057 Query: 183 RLRTKSTIQDLLLN 196 R K +++ Sbjct: 1058 RQVAKQATAKRVID 1071 >gi|157108127|ref|XP_001650089.1| helicase [Aedes aegypti] gi|108879396|gb|EAT43621.1| helicase [Aedes aegypti] Length = 1433 Score = 82.3 bits (202), Expect = 4e-14, Method: Composition-based stats. Identities = 29/160 (18%), Positives = 63/160 (39%), Gaps = 20/160 (12%) Query: 52 HDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQ---------KAFPQGRTLDKDPCT 100 K + L+ I+ K A+ +++ + ++ G T ++ Sbjct: 929 ASGKFELLDRILPKLKASGHRVLLFCQMTQCMTIIEDYLSWRGFGYLRLDGTTKAEERGD 988 Query: 101 I-QEWN--EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 + +++N + + + G GLNLQ + +V F W+ + Q R Sbjct: 989 LLKKFNCKNSEYFVFLLSTRAGGLGLNLQT-ADTVVIFDSDWNPHQDLQA-----QDRAH 1042 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + G + V V L+ N+++E +L R K + + ++ A Sbjct: 1043 RIGQRNEVRVLRLMTVNSVEERILAAARYKLNMDEKVIQA 1082 >gi|291239595|ref|XP_002739708.1| PREDICTED: brahma-like protein [Saccoglossus kowalevskii] Length = 1523 Score = 82.3 bits (202), Expect = 4e-14, Method: Composition-based stats. Identities = 32/150 (21%), Positives = 56/150 (37%), Gaps = 20/150 (13%) Query: 52 HDEKIKALEVIIEKANA--APIIVAYHFNSDLARLQKAF---------PQGRTL-DKDPC 99 K + L+ I+ K A ++ + + L+ F G T D Sbjct: 982 SSGKFELLDRILPKLKACNHKALLFSQMTTLMTILEDYFAHRGFRYLRLDGTTKSDDRAK 1041 Query: 100 TIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 ++ +N P + + G GLNLQ + ++ F W+ + Q R Sbjct: 1042 LLEMFNAPGSPYNIFLLSTRAGGLGLNLQ-AADTVIIFDSDWNPHQDLQA-----QDRAH 1095 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTK 187 + G K V V L+ N+++E +L R K Sbjct: 1096 RIGQKSEVRVLRLLTVNSVEEKILAAARYK 1125 >gi|225432366|ref|XP_002275787.1| PREDICTED: hypothetical protein [Vitis vinifera] gi|297736902|emb|CBI26103.3| unnamed protein product [Vitis vinifera] Length = 1080 Score = 82.3 bits (202), Expect = 4e-14, Method: Composition-based stats. Identities = 36/220 (16%), Positives = 78/220 (35%), Gaps = 35/220 (15%) Query: 6 KFQRELYCDLQGENIEAFNSASKTVKCLQLA-----------------NGAVYYDEEKHW 48 + Q++ Y L +++E N+ + + L +A G Y E Sbjct: 442 QLQKQFYRALLQKDLEVVNAGGERKRLLNIAMQLRKCCNHPYLFQGAEPGPPYTTGEHLI 501 Query: 49 KEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQ---------KAFPQGRTLDKDP- 98 + + K + +++ L L+ G T +D Sbjct: 502 TNSGKMVLLDKLLPKLKERDSRVLIFSQMTRLLDILEDYLMFRGYLYCRIDGNTGGEDRD 561 Query: 99 CTIQEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 +I +N+ + + + G G+NL ++++ + W+ + Q R Sbjct: 562 ASIDAFNKPGSEKFVFLLSTRAGGLGINL-ATADVVILYDSDWNPQVDLQA-----QDRA 615 Query: 157 RQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + G K+ V V+ + TI+E V++R K + L++ Sbjct: 616 HRIGQKKEVQVFRFCTEYTIEEKVIERAYKKLALDALVIQ 655 >gi|119478779|ref|XP_001259438.1| DNA excision repair protein (Rad5), putative [Neosartorya fischeri NRRL 181] gi|119407592|gb|EAW17541.1| DNA excision repair protein (Rad5), putative [Neosartorya fischeri NRRL 181] Length = 1245 Score = 82.3 bits (202), Expect = 4e-14, Method: Composition-based stats. Identities = 42/186 (22%), Positives = 58/186 (31%), Gaps = 50/186 (26%) Query: 52 HDEKIKALEVIIEK--ANAAPIIVAYHFNSDLA--------------RLQKAFPQ----- 90 KI AL + + AN + V F S L RL PQ Sbjct: 1041 TSAKIHALINHLSRVPANTKSV-VFSQFTSFLDLIGPQLTKAGISYVRLDGTMPQKARAE 1099 Query: 91 -----GRTLDKDPCTIQEWNEGKIP-----------------LLFAHPASCGHGLNLQYG 128 RT D I E P +L + G GLNL Sbjct: 1100 VLAEFSRTETFDQEEIDEDEGPDTPRVRISSKNSRSSTKSPTVLLISLRAGGVGLNLTAA 1159 Query: 129 GNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKS 188 N+ + WW Q I+R+ + G R V V I +++I+ +L+ K Sbjct: 1160 SNVFMM-DPWWSFAIEAQAIDRV-----HRMGQLRDVSVTRFIVKDSIEGRMLRVQERKM 1213 Query: 189 TIQDLL 194 I L Sbjct: 1214 NIAGSL 1219 >gi|10438729|dbj|BAB15325.1| unnamed protein product [Homo sapiens] Length = 757 Score = 82.3 bits (202), Expect = 4e-14, Method: Composition-based stats. Identities = 25/149 (16%), Positives = 52/149 (34%), Gaps = 18/149 (12%) Query: 66 ANAAPIIVAYHFNSDLARLQKAFPQGR-TLDK---------DPCTIQEWNEGKIP--LLF 113 A +++ L L+ Q R T ++ I + + + Sbjct: 20 AGGHKVLIFSQMVRCLDILEDYLIQRRYTYERIDGRVRGNLRQAAIDRFCKPDSDRFVFL 79 Query: 114 AHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQ 173 + G G+NL + + F W+ + Q R + G +AV VY LI + Sbjct: 80 LCTRAGGLGINLT-AADTCIIFDSDWNPQNDLQAQARC-----HRIGQSKAVKVYRLITR 133 Query: 174 NTIDELVLQRLRTKSTIQDLLLNALKKET 202 N+ + + + K + +L + ++ Sbjct: 134 NSYEREMFDKASLKLGLDKAVLQDINRKG 162 >gi|322701736|gb|EFY93485.1| SNF2 family helicase/ATPase, putative [Metarhizium acridum CQMa 102] Length = 1158 Score = 82.3 bits (202), Expect = 4e-14, Method: Composition-based stats. Identities = 36/207 (17%), Positives = 75/207 (36%), Gaps = 34/207 (16%) Query: 12 YCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKAL-EVIIEKANAA- 69 + +L+ ++++A + K + YD K KAL E +++ A+ Sbjct: 942 FVELRRDDVDAEHDGPAKTKAKDIRKRFDKYD-------GPHTKTKALVEDLLKSKAASQ 994 Query: 70 --------PIIVAYHFNSDLARLQKAFPQGR----------TLDKDPCTIQEWNEGK-IP 110 +V + S L ++ A T ++++ E + Sbjct: 995 AYPDEPPFKSVVFSGWTSHLDLIELALKAAGITFVRLDGSMTRTARTAAMEKFREDNTVD 1054 Query: 111 LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYL 170 ++ + G GLNL GN + ++ Q I+R+ + G KR V Sbjct: 1055 VILVSIMAGGLGLNLT-AGNTVYVMEPQYNPAAEAQAIDRV-----HRLGQKRPVRTIRY 1108 Query: 171 IAQNTIDELVLQRLRTKSTIQDLLLNA 197 I ++ +E +L+ K + L ++ Sbjct: 1109 IMHDSFEEKMLELQEKKMKLASLSMDG 1135 >gi|147845330|emb|CAN81246.1| hypothetical protein VITISV_014031 [Vitis vinifera] Length = 716 Score = 82.3 bits (202), Expect = 4e-14, Method: Composition-based stats. Identities = 23/162 (14%), Positives = 56/162 (34%), Gaps = 38/162 (23%) Query: 66 ANAAPIIVAYHFNSDLARLQKAFPQ-----------GRTLDKDPCT-------------- 100 A +++ + L ++ F + R ++ Sbjct: 464 ARKHKVLIFSQWTKILDIMEYYFSEKGLEVCRIDGSVRLDERKRQVPPIFIVTVVLEACF 523 Query: 101 -----IQEWN--EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGV 153 I+E+N + + G G+NL + + + W+ + Q ++R Sbjct: 524 FLTVLIEEFNDMNSNCRVFLLSTRAGGLGINLT-AADTCILYDSDWNPQMDLQAMDRC-- 580 Query: 154 TRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 + G + V VY L +I+ +L+R +K ++ +++ Sbjct: 581 ---HRIGQTKPVHVYRLATAQSIEGRMLKRAFSKLKLEHVVI 619 >gi|11870012|gb|AAG40586.1|AF217802_1 xnp/atr-x DNA helicase [Drosophila melanogaster] Length = 1311 Score = 82.3 bits (202), Expect = 4e-14, Method: Composition-based stats. Identities = 26/134 (19%), Positives = 53/134 (39%), Gaps = 18/134 (13%) Query: 75 YHFNSDLARLQKAFPQGRTL---------DKDPCTIQEWNE---GKIPLLFAHPASCGHG 122 Y F D+ + + G+ ++ +++N + L + G G Sbjct: 944 YEFEGDVGDFKGCWTSGKDYFRLDGSCSVEQREAMCKQFNNITNLRARLFLISTRAGGLG 1003 Query: 123 LNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQ 182 +NL N +V F + W+ Q I R+ + G + ++Y LIA T+++ V + Sbjct: 1004 INL-VAANRVVIFDVSWNPSHDTQSIFRV-----YRFGQIKPCYIYRLIAMGTMEQKVYE 1057 Query: 183 RLRTKSTIQDLLLN 196 R K +++ Sbjct: 1058 RQVAKQATAKRVID 1071 >gi|325114960|emb|CBZ50516.1| snf2 family N-terminal domain-containing protein, related [Neospora caninum Liverpool] Length = 1630 Score = 82.3 bits (202), Expect = 4e-14, Method: Composition-based stats. Identities = 28/186 (15%), Positives = 71/186 (38%), Gaps = 23/186 (12%) Query: 29 TVKCLQLANGAVYYDEE---KHWKEVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLAR 83 ++ ++AN + +E K + L+ ++ K +++ L Sbjct: 1032 LMQLRKIANHPYLFVDEYLLNEDLVRVAGKFECLDRMLPKLLHFKHKVLIFSQMTQVLDL 1091 Query: 84 LQKAF----------PQGRTLDKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNI 131 + + L + + E+N ++ + + G GLNLQ + Sbjct: 1092 MAEYMHLRGYKFARLDGSVGLTERKERMAEFNNAEVDTMIFMLSTRAGGLGLNLQ-AADT 1150 Query: 132 LVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQ 191 ++ F ++ + Q + R + G + V V+ L+ + ++E++L++ K I Sbjct: 1151 VILFDSDFNPHQDLQAM-----CRAHRLGQTKQVKVFRLVTISGVEEIILEKANRKLNID 1205 Query: 192 DLLLNA 197 +++ A Sbjct: 1206 QMVIQA 1211 >gi|297271008|ref|XP_002800208.1| PREDICTED: probable global transcription activator SNF2L2-like [Macaca mulatta] Length = 1173 Score = 82.3 bits (202), Expect = 4e-14, Method: Composition-based stats. Identities = 31/160 (19%), Positives = 63/160 (39%), Gaps = 20/160 (12%) Query: 52 HDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAF---------PQGRTLDKDPCT 100 K + L+ I+ +A +++ S + ++ F G T +D Sbjct: 649 ASGKFELLDRILPKLRATNHRVLLFCQMTSLMTIMEDYFAFRNFLYLRLDGTTKSEDRAA 708 Query: 101 I-QEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 + +++NE + + + G GLNLQ + +V F W+ + Q R Sbjct: 709 LLKKFNEPGSQYFIFLLSTRAGGLGLNLQ-AADTVVIFDSDWNPHQDLQA-----QDRAH 762 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + G + V V L N+++E +L + K + ++ A Sbjct: 763 RIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQA 802 >gi|213408667|ref|XP_002175104.1| SHREC complex subunit Mit1 [Schizosaccharomyces japonicus yFS275] gi|212003151|gb|EEB08811.1| SHREC complex subunit Mit1 [Schizosaccharomyces japonicus yFS275] Length = 1366 Score = 82.3 bits (202), Expect = 4e-14, Method: Composition-based stats. Identities = 35/202 (17%), Positives = 74/202 (36%), Gaps = 25/202 (12%) Query: 3 QYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVI 62 Y + + + +++K + L + E+ H + I L I Sbjct: 834 IYSQDVEDRTLSAELSIRSMEEASAKMLLLRILVPKLI---EKNHRILFFSQFIMQL-DI 889 Query: 63 IEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPC-TIQEW--NEGKIPLLFAHPASC 119 +E F D ++ A G T + D I + + + + Sbjct: 890 LED----------WF--DAKNIKYARFDGTTSESDRQNAIDAFCRKDSDLTCFLLSTRAG 937 Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 G G+NL + ++ ++ + Q I R + G K V V+ L+ +N+++E Sbjct: 938 GVGINL-AKADTVIILDPDFNPHQDMQAIAR-----AHRFGQKNNVTVFQLMIRNSVEEK 991 Query: 180 VLQRLRTKSTIQDLLLNALKKE 201 ++Q R K + L++ + K+ Sbjct: 992 IVQVARRKLLLDHLIVETMDKD 1013 >gi|301615850|ref|XP_002937382.1| PREDICTED: helicase-like transcription factor [Xenopus (Silurana) tropicalis] Length = 956 Score = 82.3 bits (202), Expect = 4e-14, Method: Composition-based stats. Identities = 33/187 (17%), Positives = 66/187 (35%), Gaps = 32/187 (17%) Query: 29 TVKCLQLA-------NGAVYYDEEKHWKEVHDEKIKALEVIIEKANAA----PIIVAYHF 77 +++ QL + ++ E++W + KI AL + IV F Sbjct: 750 SLRLDQLVECPQEDLDSSINKKLEQNW--MCSTKINALMHALVDQRRKDATVKSIVVSQF 807 Query: 78 NSDLARLQKAFPQGR----------TLDKDPCTIQEWNEGKIP---LLFAHPASCGHGLN 124 S L+ ++ A + T K IQ + ++ + G GLN Sbjct: 808 TSFLSVIEVALRESGFMFTRLDGSMTQKKRTEAIQSFQRPDAQSPTIMLLSLKAGGVGLN 867 Query: 125 LQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRL 184 L + + W+ +Q +R + G + V V + +N+++E +L+ Sbjct: 868 LT-AASRVFLMDPAWNPAAEEQCFDRC-----HRLGQTKKVIVTKFVVRNSVEENMLKIQ 921 Query: 185 RTKSTIQ 191 K + Sbjct: 922 SKKRELA 928 >gi|225465567|ref|XP_002263799.1| PREDICTED: similar to SNF2 domain-containing protein, putative, expressed [Vitis vinifera] Length = 1505 Score = 82.3 bits (202), Expect = 4e-14, Method: Composition-based stats. Identities = 31/188 (16%), Positives = 68/188 (36%), Gaps = 36/188 (19%) Query: 44 EEKHWKEVHDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQ-------------KAF 88 E + + + K+ L I+ +V S L ++ K + Sbjct: 1125 ENNYKEVDYSGKMVLLLDILTMCADVGDKALVFSQSLSTLDLIEYYLSKLSRQGKKGKCW 1184 Query: 89 PQGRTLDK---------DPCTIQEWNEG---KIPLLFAHPASCGHGLNLQYGGNILVFFS 136 QG+ + ++ +N+ ++ + G+NL + N ++ Sbjct: 1185 KQGKDWYRLDGRTEGSERQKLVERFNDPLNKRVKCTLISTRAGSLGINL-HSANRVIIVD 1243 Query: 137 LWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 W+ Q I R + G + VF Y L+A T++E + +R TK + +++ Sbjct: 1244 GSWNPTYDLQAI-----YRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVD 1298 Query: 197 ALKKETIH 204 ++ +H Sbjct: 1299 ---RQQVH 1303 >gi|156230803|gb|AAI51850.1| SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4 [synthetic construct] Length = 1647 Score = 82.3 bits (202), Expect = 4e-14, Method: Composition-based stats. Identities = 30/160 (18%), Positives = 62/160 (38%), Gaps = 20/160 (12%) Query: 52 HDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAF---------PQGRTLDKDPCT 100 K + L+ I+ +A +++ S + ++ F G T +D Sbjct: 1078 ASGKFELLDRILPKLRATNHKVLLFCQMTSLMTIMEDYFAYRGFKYLRLDGTTKAEDRGM 1137 Query: 101 I-QEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 + + +NE + + + G GLNLQ + ++ F W+ + Q R Sbjct: 1138 LLKTFNEPGSEYFIFLLSTRAWGLGLNLQ-SADTVIIFDSDWNPHQDLQA-----QDRAH 1191 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + G + V V L N+++E +L + K + ++ A Sbjct: 1192 RIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQA 1231 >gi|195019167|ref|XP_001984924.1| GH16759 [Drosophila grimshawi] gi|193898406|gb|EDV97272.1| GH16759 [Drosophila grimshawi] Length = 1716 Score = 82.3 bits (202), Expect = 4e-14, Method: Composition-based stats. Identities = 22/105 (20%), Positives = 45/105 (42%), Gaps = 8/105 (7%) Query: 95 DKDPCTIQEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIG 152 + ++++N + + + G GLNLQ + +V F W+ + Q Sbjct: 1216 EDRGELLRKFNAKGSDVFVFLLSTRAGGLGLNLQT-ADTVVIFDSDWNPHQDLQA----- 1269 Query: 153 VTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 R + G + V V L+ N+++E +L R K + + ++ A Sbjct: 1270 QDRAHRIGQRNEVRVLRLMTVNSVEERILAAARYKLNMDEKVIQA 1314 >gi|302143565|emb|CBI22318.3| unnamed protein product [Vitis vinifera] Length = 1477 Score = 82.3 bits (202), Expect = 4e-14, Method: Composition-based stats. Identities = 31/188 (16%), Positives = 68/188 (36%), Gaps = 36/188 (19%) Query: 44 EEKHWKEVHDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQ-------------KAF 88 E + + + K+ L I+ +V S L ++ K + Sbjct: 1097 ENNYKEVDYSGKMVLLLDILTMCADVGDKALVFSQSLSTLDLIEYYLSKLSRQGKKGKCW 1156 Query: 89 PQGRTLDK---------DPCTIQEWNEG---KIPLLFAHPASCGHGLNLQYGGNILVFFS 136 QG+ + ++ +N+ ++ + G+NL + N ++ Sbjct: 1157 KQGKDWYRLDGRTEGSERQKLVERFNDPLNKRVKCTLISTRAGSLGINL-HSANRVIIVD 1215 Query: 137 LWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 W+ Q I R + G + VF Y L+A T++E + +R TK + +++ Sbjct: 1216 GSWNPTYDLQAI-----YRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVD 1270 Query: 197 ALKKETIH 204 ++ +H Sbjct: 1271 ---RQQVH 1275 >gi|212529790|ref|XP_002145052.1| SNF2 family helicase, putative [Penicillium marneffei ATCC 18224] gi|210074450|gb|EEA28537.1| SNF2 family helicase, putative [Penicillium marneffei ATCC 18224] Length = 852 Score = 82.3 bits (202), Expect = 4e-14, Method: Composition-based stats. Identities = 24/96 (25%), Positives = 47/96 (48%), Gaps = 7/96 (7%) Query: 93 TLDKDPCTIQEWNE-GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERI 151 T+D +++++ +I +L A + G GL++ N + WW+ QQ R+ Sbjct: 718 TIDDRDRSLKDFQALPEIKILIASLKAGGVGLDIT-AANKCILVEPWWNDAIQQQAFCRL 776 Query: 152 GVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTK 187 + G +R V + L+A+NTID+ +++ K Sbjct: 777 F-----RIGQERDVEIVKLVAKNTIDDYMMKLQEMK 807 >gi|169854907|ref|XP_001834125.1| hypothetical protein CC1G_08756 [Coprinopsis cinerea okayama7#130] gi|116504825|gb|EAU87720.1| hypothetical protein CC1G_08756 [Coprinopsis cinerea okayama7#130] Length = 922 Score = 82.3 bits (202), Expect = 4e-14, Method: Composition-based stats. Identities = 36/166 (21%), Positives = 59/166 (35%), Gaps = 19/166 (11%) Query: 52 HDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQ--GRTLDKDPCTIQEWNEG 107 K+ L +++ I + S L L+K + RTL D + E Sbjct: 730 ASAKMLKLVEYLKEWDDTGDKTICYSQWTSMLDLLEKLLSRHGIRTLRFDGQMDRAAREY 789 Query: 108 KIP---------LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQ 158 I ++ GLNL N +V L W+ Q +R + Sbjct: 790 AISSFKRAGGPKVMLISTRCGSVGLNLVM-ANRIVNMDLSWNYAAESQAYDRC-----HR 843 Query: 159 AGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIH 204 G + VFV L+ +NTI+E +L+ K + + L +H Sbjct: 844 IGQDKDVFVKRLVVENTIEERMLRLQDVKVGLAEAALGEGSGAKLH 889 >gi|168060035|ref|XP_001782004.1| SNF2 family DNA-dependent ATPase [Physcomitrella patens subsp. patens] gi|162666495|gb|EDQ53147.1| SNF2 family DNA-dependent ATPase [Physcomitrella patens subsp. patens] Length = 1445 Score = 82.3 bits (202), Expect = 4e-14, Method: Composition-based stats. Identities = 24/175 (13%), Positives = 60/175 (34%), Gaps = 22/175 (12%) Query: 37 NGAVYYDEEKHWK--EVHDEKIKALEVIIEKANAAP--IIVAYHFNSDLARLQ------- 85 G ++ + + K+ L+ ++ + +++ L L Sbjct: 712 GGDANTNDNNKIQRIVLSSGKLAILDKLLVRLKETKHRVLIFSQMVKMLDILADYLSLRG 771 Query: 86 ---KAFPQGRTLDKDPCTIQEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWD 140 + D ++ +N + + G G+NL + ++ F W+ Sbjct: 772 FQFQRLDGSTRADLRHQAMEHFNAPGSEDFCFLLSTRAGGLGINL-ATADTVIIFDSDWN 830 Query: 141 LEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 + Q + R + G + V +Y + +++E +L+R + K L+L Sbjct: 831 PQNDLQAMSR-----AHRIGQRDVVNIYRFVISRSVEEDILERAKKKMASSKLIL 880 >gi|194382982|dbj|BAG59047.1| unnamed protein product [Homo sapiens] Length = 960 Score = 82.3 bits (202), Expect = 4e-14, Method: Composition-based stats. Identities = 31/160 (19%), Positives = 63/160 (39%), Gaps = 20/160 (12%) Query: 52 HDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAF---------PQGRTLDKDPCT 100 K + L+ I+ +A +++ S + ++ F G T +D Sbjct: 649 ASGKFELLDRILPKLRATNHRVLLFCQMTSLMTIMEDYFAFRNFLYLRLDGTTKSEDRAA 708 Query: 101 I-QEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 + +++NE + + + G GLNLQ + +V F W+ + Q R Sbjct: 709 LLKKFNEPGSQYFIFLLSTRAGGLGLNLQ-AADTVVIFDSDWNPHQDLQA-----QDRAH 762 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + G + V V L N+++E +L + K + ++ A Sbjct: 763 RIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQA 802 >gi|195442878|ref|XP_002069173.1| GK23635 [Drosophila willistoni] gi|194165258|gb|EDW80159.1| GK23635 [Drosophila willistoni] Length = 1720 Score = 82.3 bits (202), Expect = 4e-14, Method: Composition-based stats. Identities = 22/105 (20%), Positives = 44/105 (41%), Gaps = 8/105 (7%) Query: 95 DKDPCTIQEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIG 152 + ++++N + + G GLNLQ + +V F W+ + Q Sbjct: 1220 EDRGELLRKFNAKGSDYFVFLLSTRAGGLGLNLQT-ADTVVIFDSDWNPHQDLQA----- 1273 Query: 153 VTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 R + G + V V L+ N+++E +L R K + + ++ A Sbjct: 1274 QDRAHRIGQRNEVRVLRLMTVNSVEERILAAARYKLNMDEKVIQA 1318 >gi|170588595|ref|XP_001899059.1| SNF2 family N-terminal domain containing protein [Brugia malayi] gi|158593272|gb|EDP31867.1| SNF2 family N-terminal domain containing protein [Brugia malayi] Length = 1207 Score = 82.3 bits (202), Expect = 4e-14, Method: Composition-based stats. Identities = 31/162 (19%), Positives = 60/162 (37%), Gaps = 33/162 (20%) Query: 62 IIEKA--NAAPIIVAYHFNSDLARLQK------------------------AFPQGRTLD 95 IIE+A N +++ L ++++ F T Sbjct: 803 IIEQAVLNGEKVLLFSQSLLTLNQIERFLETSSSVTVGNEKLRWKKSINYYRFDGSTTAT 862 Query: 96 KDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 + I +N + I L + G+NL + ++ F W+ Q + RI Sbjct: 863 EREKLINRFNQDPNILLFLISTRAGSLGINL-VSASRVIIFDASWNPCHDAQAVCRI--- 918 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + G KR +VY LI N+++ + R K+ +Q +++ Sbjct: 919 --YRYGQKRRTYVYRLIMDNSMERAIFSRQIGKNGLQQRVVD 958 >gi|224071533|ref|XP_002303505.1| chromatin remodeling complex subunit [Populus trichocarpa] gi|222840937|gb|EEE78484.1| chromatin remodeling complex subunit [Populus trichocarpa] Length = 2327 Score = 81.9 bits (201), Expect = 4e-14, Method: Composition-based stats. Identities = 26/160 (16%), Positives = 59/160 (36%), Gaps = 21/160 (13%) Query: 52 HDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQ------------KAFPQGRTLDKD 97 K+ L +++ +++ L L+ + ++ Sbjct: 1059 ASAKLTLLHSMLKILYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDGSVSVSDR 1118 Query: 98 PCTIQEWNEGKIP-LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 I +N+ K + SCG G+NL + ++ + ++ Q + R Sbjct: 1119 QTAIARFNQDKSRFVFLLSTRSCGLGINL-ASADTVIIYDSDFNPHSDIQAMNR-----A 1172 Query: 157 RQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + G + + VY L+ + +++E +LQ R K + L +N Sbjct: 1173 HRIGQSKRLLVYRLVVRASVEERILQLARKKLVLDQLFVN 1212 >gi|123415533|ref|XP_001304706.1| SNF2 family N-terminal domain containing protein [Trichomonas vaginalis G3] gi|121886177|gb|EAX91776.1| SNF2 family N-terminal domain containing protein [Trichomonas vaginalis G3] Length = 572 Score = 81.9 bits (201), Expect = 4e-14, Method: Composition-based stats. Identities = 29/136 (21%), Positives = 63/136 (46%), Gaps = 11/136 (8%) Query: 63 IEKANAAPIIVAYHFNS--DLARLQKAFPQGRTLDKDPCTIQEWNEGKIP-LLFAHPASC 119 E A +I+ Y + D +Q F + ++ I+E+++ P L A + Sbjct: 393 CESEEAINMIIKYVIPTLVDTEYIQ--FSSSTDIAENAKKIEEFSKEDGPDLFIATTTAA 450 Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 HG+NL +I++FF L W+ + Q +R+ + + V ++ ++ +TID+ Sbjct: 451 AHGINLT-SASIVIFFELNWNPKIDLQAEDRV-----HRLTQTKTVDIFKIVMIDTIDQR 504 Query: 180 VLQRLRTKSTIQDLLL 195 +++ K I + ++ Sbjct: 505 IIEAQERKDKIANGVI 520 >gi|255716748|ref|XP_002554655.1| KLTH0F10406p [Lachancea thermotolerans] gi|238936038|emb|CAR24218.1| KLTH0F10406p [Lachancea thermotolerans] Length = 765 Score = 81.9 bits (201), Expect = 4e-14, Method: Composition-based stats. Identities = 28/160 (17%), Positives = 58/160 (36%), Gaps = 21/160 (13%) Query: 52 HDEKIKAL-EVIIE-KANAAPI--IVAYHFNSDLARLQKAFPQGR----------TLDKD 97 KI+AL E + +++ I IV F S L ++ + T + Sbjct: 592 SSTKIEALVEELYNLRSDRRTIKSIVFSQFTSMLDLVEWRLKRAGFQTVKLQGSMTPTQR 651 Query: 98 PCTIQEW-NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 TI+ + + + G LNL + + WW+ Q +R+ Sbjct: 652 DQTIKYFMENTHCEVFLVSLKAGGVALNLCEASQVFIM-DPWWNPSVEWQSGDRV----- 705 Query: 157 RQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + G R V + +++I+ +++ K+ + +N Sbjct: 706 HRIGQYRPVKITRFCIEDSIESRIIELQEKKANMIHATIN 745 >gi|296812409|ref|XP_002846542.1| transcription termination factor 2 [Arthroderma otae CBS 113480] gi|238841798|gb|EEQ31460.1| transcription termination factor 2 [Arthroderma otae CBS 113480] Length = 1166 Score = 81.9 bits (201), Expect = 4e-14, Method: Composition-based stats. Identities = 30/171 (17%), Positives = 65/171 (38%), Gaps = 20/171 (11%) Query: 40 VYYDEEKHWKEVHDEKIKALEVIIEKANAAPI--IVAYHFNSDLARLQKAFPQGRT---- 93 +Y K + + E + + PI ++ + S L ++ A + Sbjct: 981 LYEGPHTKTKALISSLLDTAEENKKSPHEPPIKSVIFSSWTSHLDLIEVALEENGLTGYA 1040 Query: 94 -------LDKDPCTIQEW-NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQ 145 L + I+ + + + +L + G GLNL G+++ ++ Sbjct: 1041 RLDGTMSLKQRNSAIETFSKDDDVTILLVTIGAGGVGLNLT-AGSMVYIMEPQYNPATIA 1099 Query: 146 QMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 Q I+R+ + G R V I +++I+E + + + K + D+ LN Sbjct: 1100 QAIDRV-----HRIGQTREVTTIQYIMKDSIEEKITELAKRKQRLADMSLN 1145 >gi|241634353|ref|XP_002410509.1| conserved hypothetical protein [Ixodes scapularis] gi|215503438|gb|EEC12932.1| conserved hypothetical protein [Ixodes scapularis] Length = 1597 Score = 81.9 bits (201), Expect = 4e-14, Method: Composition-based stats. Identities = 27/113 (23%), Positives = 48/113 (42%), Gaps = 9/113 (7%) Query: 87 AFPQGRTLDKDPCTIQEWNEGKIP---LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEE 143 ++D I+ +N+ P L + G NL G N +V W+ Sbjct: 1254 RMDGSTSVDLRKRWIEMFNDESNPRGRLFLISTKAGSLGTNL-VGANRVVLMDASWNPTH 1312 Query: 144 HQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 Q I R+ + G K+ VF+Y +AQ T++E + R TK ++ +++ Sbjct: 1313 DVQAIFRV-----YRFGQKKPVFIYRFLAQGTMEEKIYDRQVTKQSLACRVVD 1360 >gi|312217906|emb|CBX97853.1| hypothetical protein [Leptosphaeria maculans] Length = 1064 Score = 81.9 bits (201), Expect = 4e-14, Method: Composition-based stats. Identities = 24/161 (14%), Positives = 57/161 (35%), Gaps = 21/161 (13%) Query: 51 VHDEKIKA----LEVIIEKANAAPIIVAYHFNSDLARLQ----------KAFPQGRTLDK 96 + KI+ L I E + ++ F S L ++ + + +D+ Sbjct: 888 IPSAKIEKTMALLAEIAENDPSEKTLIFSQFTSLLDLVEVPLSQRKIRYQRYDGSMKMDE 947 Query: 97 DPCTIQEW-NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTR 155 + + ++ ++ + GLNL ++V +W+ Q ++R Sbjct: 948 RADAVNAFMDDPDENVMLVSLKAGNAGLNLWKASQVIVL-DPFWNPFIEDQAVDR----- 1001 Query: 156 QRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + R V V+ ++ T+++ + K I L+ Sbjct: 1002 AHRMPQPREVHVHRVLVPETVEDRICVLQDKKREIIGAALD 1042 >gi|308489133|ref|XP_003106760.1| CRE-CSB-1 protein [Caenorhabditis remanei] gi|308253414|gb|EFO97366.1| CRE-CSB-1 protein [Caenorhabditis remanei] Length = 918 Score = 81.9 bits (201), Expect = 4e-14, Method: Composition-based stats. Identities = 29/153 (18%), Positives = 57/153 (37%), Gaps = 8/153 (5%) Query: 45 EKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDK-DPCTIQE 103 + K+ ++ N ++ + +R++ A G T P I++ Sbjct: 482 NRVIFFTQRRKVVSMMEYFLDQNRYELVTYFRRMKKNSRIRHASLTGSTTAAARPKIIKK 541 Query: 104 WNEG-KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFK 162 + E I + + G GLNL N ++ F W+ + Q RI + G + Sbjct: 542 FEEDTDIKVFLMTTRAGGLGLNLTC-ANKVIIFDPDWNPQADNQAKNRI-----YRMGQE 595 Query: 163 RAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 V + LI+ T+++ + K + LL Sbjct: 596 NDVSIVRLISNGTLEDRKFFKQVQKEMLAAQLL 628 >gi|312072073|ref|XP_003138899.1| hypothetical protein LOAG_03314 [Loa loa] gi|307765938|gb|EFO25172.1| hypothetical protein LOAG_03314 [Loa loa] Length = 1156 Score = 81.9 bits (201), Expect = 4e-14, Method: Composition-based stats. Identities = 31/162 (19%), Positives = 59/162 (36%), Gaps = 33/162 (20%) Query: 62 IIEKA--NAAPIIVAYHFNSDLARLQK------------------------AFPQGRTLD 95 IIE+A N +++ L ++++ F T Sbjct: 752 IIEQAVMNGEKVLLFSQSLLTLNQIERFLETSSSVTVGNEKLHWKRNTNYYRFDGSTTAT 811 Query: 96 KDPCTIQEWNEG-KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 + I +N I L + G+NL + ++ F W+ Q + RI Sbjct: 812 ERERLISRFNRDHNIFLFLISTRAGSLGINL-VSASRVIIFDASWNPCHDAQAVCRI--- 867 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + G KR +VY LI N+++ + R K+ +Q +++ Sbjct: 868 --YRYGQKRRTYVYRLITDNSMERAIFSRQIGKNGLQQRVVD 907 >gi|88811008|ref|ZP_01126264.1| helicase, Snf2 family protein [Nitrococcus mobilis Nb-231] gi|88791547|gb|EAR22658.1| helicase, Snf2 family protein [Nitrococcus mobilis Nb-231] Length = 572 Score = 81.9 bits (201), Expect = 4e-14, Method: Composition-based stats. Identities = 32/181 (17%), Positives = 69/181 (38%), Gaps = 22/181 (12%) Query: 30 VKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAP---IIVAYHFNSDLARLQK 86 + C+++ Y +++ K++ L I+++ A P I+V + L +++ Sbjct: 132 LACMRMLCDTPYILDQECRV---SPKLEELGRILDEQLAEPESKIVVFSEWTRRLELVRE 188 Query: 87 AFPQG----------RTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFS 136 ++ I + + L + GLNLQ N+++ Sbjct: 189 HVETAAFGYALHTGKVPQERRRQEINRFKQDPACRLLLSSDAGATGLNLQ-AANVVINLD 247 Query: 137 LWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 L W + I R QR+ V V L+ +++I+ +L L K ++ + +L Sbjct: 248 LPWSPARLEPRIARAWRKHQRRH-----VSVINLVCEDSIEHRILHLLEQKRSLAEGVLE 302 Query: 197 A 197 Sbjct: 303 G 303 >gi|224125208|ref|XP_002329920.1| chromatin remodeling complex subunit [Populus trichocarpa] gi|222871157|gb|EEF08288.1| chromatin remodeling complex subunit [Populus trichocarpa] Length = 2332 Score = 81.9 bits (201), Expect = 4e-14, Method: Composition-based stats. Identities = 25/160 (15%), Positives = 59/160 (36%), Gaps = 21/160 (13%) Query: 52 HDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQ------------KAFPQGRTLDKD 97 K+ L +++ +++ L L+ + ++ Sbjct: 1060 ASAKLTLLHSMLKILYKEGHRVLIFSQMTKLLDILEDYLTIEFGPKTYERVDGSVSVSDR 1119 Query: 98 PCTIQEWNEGKIP-LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 I +N+ K + SCG G+NL + ++ + ++ Q + R Sbjct: 1120 QTAIARFNQDKSRFVFLLSTRSCGLGINL-ATADTVIIYDSDFNPHADIQAMNR-----A 1173 Query: 157 RQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + G + + VY L+ + +++E +LQ + K + L +N Sbjct: 1174 HRIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFVN 1213 >gi|289621667|emb|CBI51578.1| unnamed protein product [Sordaria macrospora] Length = 1136 Score = 81.9 bits (201), Expect = 5e-14, Method: Composition-based stats. Identities = 24/150 (16%), Positives = 49/150 (32%), Gaps = 17/150 (11%) Query: 59 LEVIIEKANAAPIIVAYHFNSDLA----RLQKAFPQGRTLDKDPCTIQEW-------NEG 107 L + + I+ F + L RL++A LD Q Sbjct: 973 LHKLRSDNASHKSIIFSQFTTMLQLIEWRLRRAGITTVMLDGSMTPAQRQASINHFMKNV 1032 Query: 108 KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFV 167 + + G LNL + + WW+ Q +R + G R + Sbjct: 1033 DVECFLVSLKAGGVALNLTEASRVFI-VDPWWNPAAEWQSADRC-----HRIGQSRPCTI 1086 Query: 168 YYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 L +++++ ++ K+ + + +NA Sbjct: 1087 TRLCIEDSVESRMVLLQEKKTNMINSTINA 1116 >gi|195573901|ref|XP_002104930.1| GD18194 [Drosophila simulans] gi|194200857|gb|EDX14433.1| GD18194 [Drosophila simulans] Length = 1098 Score = 81.9 bits (201), Expect = 5e-14, Method: Composition-based stats. Identities = 26/134 (19%), Positives = 53/134 (39%), Gaps = 18/134 (13%) Query: 75 YHFNSDLARLQKAFPQGRTL---------DKDPCTIQEWNEG---KIPLLFAHPASCGHG 122 Y F D+ + + G+ ++ +++N + L + G G Sbjct: 944 YEFEGDVGDFKGCWTSGKDYFRLDGSCSVEQREAMCKQFNNVTNLRARLFLISTRAGGLG 1003 Query: 123 LNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQ 182 +NL N +V F + W+ Q I R+ + G + ++Y LIA T+++ V + Sbjct: 1004 INL-VAANRVVIFDVSWNPSHDTQSIFRV-----YRFGQIKPCYIYRLIAMGTMEQKVYE 1057 Query: 183 RLRTKSTIQDLLLN 196 R K +++ Sbjct: 1058 RQVAKQATAKRVID 1071 >gi|194886128|ref|XP_001976555.1| GG19952 [Drosophila erecta] gi|190659742|gb|EDV56955.1| GG19952 [Drosophila erecta] Length = 1717 Score = 81.9 bits (201), Expect = 5e-14, Method: Composition-based stats. Identities = 20/102 (19%), Positives = 42/102 (41%), Gaps = 7/102 (6%) Query: 96 KDPCTIQEWNEG-KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 + + E+N + L + G+NL G N ++ F W+ Q + RI Sbjct: 1067 ERERLVNEFNANSNVKLFLISTRAGSLGINLT-GANRVIIFDASWNPCHDTQAVYRI--- 1122 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + G + FVY ++ +++ + R K + D +++ Sbjct: 1123 --YRYGQTKPCFVYRIVMDRCLEKKIYDRQIKKQGMSDRIVD 1162 >gi|189423365|ref|YP_001950542.1| non-specific serine/threonine protein kinase [Geobacter lovleyi SZ] gi|189419624|gb|ACD94022.1| Non-specific serine/threonine protein kinase [Geobacter lovleyi SZ] Length = 641 Score = 81.9 bits (201), Expect = 5e-14, Method: Composition-based stats. Identities = 39/206 (18%), Positives = 70/206 (33%), Gaps = 28/206 (13%) Query: 3 QYHKFQRELYCDLQGENIEAFNSASKTVKCLQLAN-----GAVYYDEEKHWKEVHDEKIK 57 Y + + + + S + G D +H + I+ Sbjct: 417 MYEQVRLAIIEEYGKSA-----SLVSLQRLRMFCTHPLLAGFALADPTEHM-PKYQRLIE 470 Query: 58 ALEVIIEKANAAPIIVAY-----HFNSDLA-RLQK---AFPQGRTLDKDPCTI-QEWN-E 106 LE I + I Y DL+ R F GR D TI ++ Sbjct: 471 LLEEIFSRREKCLIFTGYTGMTDILMHDLSKRFVDQYFNFIDGRVPVPDRQTIVDAFSIS 530 Query: 107 GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVF 166 L +P + G GLN+ N ++ ++ W+ Q R + R V Sbjct: 531 PTSGALILNPRAAGVGLNIT-AANHVIHYNPEWNPALEDQASAR-----AYRRKQTRPVT 584 Query: 167 VYYLIAQNTIDELVLQRLRTKSTIQD 192 V+ L ++++E+V+ RL+ K + + Sbjct: 585 VHQLYFVDSVEEVVVGRLKLKRGLSE 610 >gi|62484263|ref|NP_611885.3| CG4049 [Drosophila melanogaster] gi|61678334|gb|AAF47165.3| CG4049 [Drosophila melanogaster] Length = 1669 Score = 81.9 bits (201), Expect = 5e-14, Method: Composition-based stats. Identities = 20/102 (19%), Positives = 42/102 (41%), Gaps = 7/102 (6%) Query: 96 KDPCTIQEWNEG-KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 + + E+N + L + G+NL G N ++ F W+ Q + RI Sbjct: 1026 ERERLVNEFNANSNVKLFLISTRAGSLGINLT-GANRVIIFDASWNPCHDTQAVYRI--- 1081 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + G + FVY ++ +++ + R K + D +++ Sbjct: 1082 --YRYGQTKPCFVYRIVMDRCLEKKIYDRQIKKQGMSDRIVD 1121 >gi|256389644|ref|YP_003111208.1| SNF2-related protein [Catenulispora acidiphila DSM 44928] gi|256355870|gb|ACU69367.1| SNF2-related protein [Catenulispora acidiphila DSM 44928] Length = 727 Score = 81.9 bits (201), Expect = 5e-14, Method: Composition-based stats. Identities = 30/153 (19%), Positives = 61/153 (39%), Gaps = 17/153 (11%) Query: 52 HDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQKAFPQGR--------TLDKDPCTI 101 K++ L I+++A N+ ++V +F L + +A + Sbjct: 540 TSAKLRRLVEIVDEAEANSRKVVVFSYFRDVLDTVCRALGDRASGPLTGSMQPQHRQELV 599 Query: 102 QEWNEGKI-PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 + K +L + + G GLN+Q ++++ Q I R + G Sbjct: 600 DAFTAAKKHAVLVSQIQAGGVGLNMQ-AASVVILCEPQVKPTLETQAIAR-----AHRMG 653 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDL 193 R V V+ L+ +++D+ +L+ L KS + D Sbjct: 654 QIRRVQVHRLLVADSVDQRMLEILDAKSGLFDA 686 >gi|326479937|gb|EGE03947.1| SNF2 family helicase/ATPase [Trichophyton equinum CBS 127.97] Length = 1838 Score = 81.9 bits (201), Expect = 5e-14, Method: Composition-based stats. Identities = 25/157 (15%), Positives = 62/157 (39%), Gaps = 18/157 (11%) Query: 52 HDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARL---------QKAFPQGRT-LDKDPC 99 + + + + II+++ I++ + L+ L + G+T + Sbjct: 1310 NSHRTQMVGQIIDESIKAGDKILIFSGYLHTLSYLGSMLGARGHKYCRLDGKTPIATRQA 1369 Query: 100 TIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQA 159 +++ + + + + GLN+ G N ++ F ++ +Q I R + Sbjct: 1370 ATRDFRDSDVHVYLISTKAGALGLNI-IGANRVIIFESEYNPTWEEQAIGR-----AYRL 1423 Query: 160 GFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 G + VFVY + T +EL+ ++ K + ++ Sbjct: 1424 GQTKDVFVYRFVMGGTFEELIHEKGVFKKNMALRAID 1460 >gi|242045708|ref|XP_002460725.1| hypothetical protein SORBIDRAFT_02g033850 [Sorghum bicolor] gi|241924102|gb|EER97246.1| hypothetical protein SORBIDRAFT_02g033850 [Sorghum bicolor] Length = 614 Score = 81.9 bits (201), Expect = 5e-14, Method: Composition-based stats. Identities = 25/160 (15%), Positives = 60/160 (37%), Gaps = 21/160 (13%) Query: 52 HDEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQ------------KAFPQGRTLDKD 97 K+ L +++ + +++ L L+ + ++ + Sbjct: 287 ASAKLALLHSMLKILHKEGHRVLIFSQMTKLLDILEDYLTLEFGPKTFERVDGSVSVAER 346 Query: 98 PCTIQEWNEGKIP-LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 I +N+ K + SCG G+NL + ++ + ++ Q + R Sbjct: 347 QAAIARFNQDKTRFVFLLSTRSCGLGINL-ATADTVIIYDSDFNPHADIQAMNR-----A 400 Query: 157 RQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + G + VY L+ + +++E +LQ + K + L +N Sbjct: 401 HRIGQSNRLLVYRLVVRASVEERILQLAKKKLMLDQLFVN 440 >gi|18606477|gb|AAH23186.1| Smarca4 protein [Mus musculus] Length = 563 Score = 81.9 bits (201), Expect = 5e-14, Method: Composition-based stats. Identities = 30/160 (18%), Positives = 62/160 (38%), Gaps = 20/160 (12%) Query: 52 HDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAF---------PQGRTLDKDPCT 100 K + L+ I+ +A +++ S + ++ F G T +D Sbjct: 27 ASGKFELLDRILPKLRATNHKVLLFCQMTSLMTIMEDYFAYRGFKYLRLDGTTKAEDRGM 86 Query: 101 I-QEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 + + +NE + + + G GLNLQ + ++ F W+ + Q R Sbjct: 87 LLKTFNEPGSEYFIFLLSTRAGGLGLNLQ-SADTVIIFDSDWNPHQDLQA-----QDRAH 140 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + G + V V L N+++E +L + K + ++ A Sbjct: 141 RIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQA 180 >gi|242023503|ref|XP_002432172.1| Homeotic gene regulator, putative [Pediculus humanus corporis] gi|212517560|gb|EEB19434.1| Homeotic gene regulator, putative [Pediculus humanus corporis] Length = 1504 Score = 81.9 bits (201), Expect = 5e-14, Method: Composition-based stats. Identities = 22/105 (20%), Positives = 44/105 (41%), Gaps = 8/105 (7%) Query: 95 DKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIG 152 + ++++N L + G GLNLQ + ++ F W+ + Q Sbjct: 1051 EDRGELLRKFNSKDSEYFLFLLSTRAGGLGLNLQ-AADTVIIFDSDWNPHQDLQA----- 1104 Query: 153 VTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 R + G + V V L+ N+++E +L R K + + ++ A Sbjct: 1105 QDRAHRIGQQNEVRVLRLMTVNSVEERILAAARYKLNMDEKVIQA 1149 >gi|321468268|gb|EFX79254.1| hypothetical protein DAPPUDRAFT_188325 [Daphnia pulex] Length = 1009 Score = 81.9 bits (201), Expect = 5e-14, Method: Composition-based stats. Identities = 30/124 (24%), Positives = 51/124 (41%), Gaps = 13/124 (10%) Query: 76 HFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKI---PLLFAHPASCGHGLNLQYGGNIL 132 FN D RL L K+ C +N L + G G+NL N + Sbjct: 787 RFNHDYFRLDG--QTSAELRKNAC--NAFNNPSNLRSRLFLISTKAGGLGINL-VAANRV 841 Query: 133 VFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQD 192 + F W+ Q I R+ + G K+ ++Y +AQ T++E + R TK ++ Sbjct: 842 IIFDASWNPSHDVQSIFRV-----YRFGQKKPCYIYRFLAQGTMEEKIYDRQVTKLSLSC 896 Query: 193 LLLN 196 +++ Sbjct: 897 RVVD 900 >gi|209875457|ref|XP_002139171.1| SNF2 family N-terminal domain-containing protein [Cryptosporidium muris RN66] gi|209554777|gb|EEA04822.1| SNF2 family N-terminal domain-containing protein [Cryptosporidium muris RN66] Length = 838 Score = 81.9 bits (201), Expect = 5e-14, Method: Composition-based stats. Identities = 31/164 (18%), Positives = 60/164 (36%), Gaps = 20/164 (12%) Query: 53 DEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTLD-----------KDPC 99 K++ L V++ A I++ L ++ + + + Sbjct: 619 SMKLQILWVLVPALTARGHKILIFSESLDMLNLIELTILTPKQIKWIKLEGKVPKKQRIS 678 Query: 100 TIQEWNE-GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQ 158 +I+ +NE I +L GLNL + ++ W+ + Q I R + Sbjct: 679 SIRSFNEQKDILVLLLSKQIGSVGLNLTT-ADRIIIVDPHWNPAQDDQAIGR-----AFR 732 Query: 159 AGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKET 202 G K V VY LI+ I++ + K+ I L+ K++ Sbjct: 733 IGQKEDVVVYRLISSGAIEDWKFRLQIHKAGIAHFFLHGQKQKV 776 >gi|325120775|emb|CBZ56330.1| hypothetical protein NCLIV_067550 [Neospora caninum Liverpool] Length = 2638 Score = 81.9 bits (201), Expect = 5e-14, Method: Composition-based stats. Identities = 28/157 (17%), Positives = 58/157 (36%), Gaps = 20/157 (12%) Query: 55 KIKALEVIIEK--ANAAPIIVAYHFNSDLARLQ---------KAFPQGRTLDKDPC---T 100 K L+V++ +++ L L+ G T ++ T Sbjct: 1580 KFAMLDVLLPALKMGNHRVLIFSQMTKLLDILEVYLSLRGHTYLRLDGGTSSEERQKRLT 1639 Query: 101 IQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 + + + + G G+NLQ + ++ F W+ + +Q +R + G Sbjct: 1640 LYNQEGSEYFIFILSTKAGGLGVNLQ-SADTVIIFDSDWNPQNDEQA-----QSRAHRIG 1693 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 K+ V I+ +I+E +LQR K L++ + Sbjct: 1694 QKKEVLTLRFISVESIEEQILQRAECKLDRDKLVIQS 1730 >gi|302676696|ref|XP_003028031.1| hypothetical protein SCHCODRAFT_60278 [Schizophyllum commune H4-8] gi|300101719|gb|EFI93128.1| hypothetical protein SCHCODRAFT_60278 [Schizophyllum commune H4-8] Length = 765 Score = 81.9 bits (201), Expect = 5e-14, Method: Composition-based stats. Identities = 37/191 (19%), Positives = 72/191 (37%), Gaps = 21/191 (10%) Query: 1 MKQYHKFQRELYCDLQGENIEAFNSASKTVKCLQ--LANGAVYYDEEKHWKEVHDEKIKA 58 +++Y + + D+ + + + + ++ LQ + + +E K + K Sbjct: 434 IERYADLNKRVMKDIYADEGKRYK-LTYSLAILQRDMCGKLDQWYKEGSNKVLIFTKSLK 492 Query: 59 LEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNE-GKIPLLFAHPA 117 L ++E +H D +K I E+NE ++ Sbjct: 493 LMEVLE----------FHMKRDSYEFRK-LDGSVPQKYRQKYIDEFNEQPEVFCFLISTL 541 Query: 118 SCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 + G G+NL N +V F W+ Q ++R + G R V+VY L+ +++ Sbjct: 542 AGGTGINLT-AANKVVIFDPNWNPAHDLQAMDR-----AFRYGQTRDVYVYRLLGGGSLE 595 Query: 178 ELVLQRLRTKS 188 ELV R K Sbjct: 596 ELVYARQLYKQ 606 >gi|299470303|emb|CBN78353.1| conserved unknown protein [Ectocarpus siliculosus] Length = 1972 Score = 81.9 bits (201), Expect = 5e-14, Method: Composition-based stats. Identities = 36/206 (17%), Positives = 77/206 (37%), Gaps = 33/206 (16%) Query: 8 QRELYCDLQGENIEAFNSASKTVKCLQLANGA-VYYDEEKHWKEVHDE----------KI 56 + E+ ++ E+ + V + N + D E+ E + K+ Sbjct: 1218 EDEMAAVVKREDEHYQKLMTLLVHLRKACNHPHMLVDVERSVGETESQTVDYTVAASGKL 1277 Query: 57 KALEVIIE--KANAAPIIVAYHFNSDLARLQ-----KAFPQGRTLDKDPC-----TIQEW 104 L+ ++ +A ++ F S L LQ + + GR + + + Sbjct: 1278 ALLDRMLPRLQAKGHRCLILSQFASMLDILQDLCLARGYEHGRLDESTSSPQTRLDARRF 1337 Query: 105 NEG--KIPLLFAHPASCGH--GLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 N K+ +L G GLNL + ++ + W+ + Q IER+ + G Sbjct: 1338 NAPESKVSVLLVPTRMTGASGGLNLT-AADTVILYDSHWNPQVDLQAIERV-----HRIG 1391 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRT 186 + V V+ L+ + +++E ++ R Sbjct: 1392 QSKPVKVFRLLCRRSVEERIVAERRR 1417 >gi|315648445|ref|ZP_07901544.1| SNF2-related protein [Paenibacillus vortex V453] gi|315276139|gb|EFU39485.1| SNF2-related protein [Paenibacillus vortex V453] Length = 585 Score = 81.9 bits (201), Expect = 5e-14, Method: Composition-based stats. Identities = 33/156 (21%), Positives = 66/156 (42%), Gaps = 17/156 (10%) Query: 52 HDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAF--------PQGRTLDKDPCT-IQ 102 + K + +I++ N +IV + + L F P +++ + Sbjct: 375 ANTKAEKTIELIQQMNEK-VIVFTEYRATQEYLLNYFRDHGLVSVPYRGGMNRGKKDWMM 433 Query: 103 EWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFK 162 + GK ++ A + G G+NLQ+ + +V F L W+ +Q I R+ + G Sbjct: 434 DLFRGKAQVMIA-TEAGGEGINLQF-CHHMVNFDLPWNPMRVEQRIGRV-----HRLGQT 486 Query: 163 RAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNAL 198 V ++ L TI+E +L L K + ++++ L Sbjct: 487 NDVQIFNLSTSGTIEEHILNLLHEKINMFEMVIGGL 522 >gi|297828221|ref|XP_002881993.1| hypothetical protein ARALYDRAFT_483627 [Arabidopsis lyrata subsp. lyrata] gi|297327832|gb|EFH58252.1| hypothetical protein ARALYDRAFT_483627 [Arabidopsis lyrata subsp. lyrata] Length = 873 Score = 81.9 bits (201), Expect = 5e-14, Method: Composition-based stats. Identities = 37/229 (16%), Positives = 81/229 (35%), Gaps = 42/229 (18%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQL--ANGAVY---------YDEEKHWKE 50 K Y R+ L + N S +QL A Y ++E +H + Sbjct: 311 KIYTSILRKELPGLLALSSGGSNHTSLQNIVIQLRKACSHPYLFPGIEPEPFEEGEHLVQ 370 Query: 51 VHDEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQKAFPQGR----TLDKDPCTIQEW 104 K+ L+ ++++ + +++ S L LQ R LD + + Sbjct: 371 -ASGKLFVLDQLLKRLHDIGHRVLLFSQMTSTLDILQDFMELRRYSYERLDGSVRAEERF 429 Query: 105 ------------------NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 + + + G GLNL + ++F+ W+ + +Q Sbjct: 430 AAIKNFSAKSERGLDSEVDASNAFVFMISTRAGGVGLNL-VAADTVIFYEQDWNPQVDKQ 488 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 ++R + G V L+ +++++E++L+R K + ++ Sbjct: 489 ALQR-----AHRIGQISHVLSINLVTEHSVEEVILRRAERKLQLSHNVV 532 >gi|254244620|ref|ZP_04937942.1| hypothetical protein PA2G_05487 [Pseudomonas aeruginosa 2192] gi|126197998|gb|EAZ62061.1| hypothetical protein PA2G_05487 [Pseudomonas aeruginosa 2192] Length = 666 Score = 81.9 bits (201), Expect = 5e-14, Method: Composition-based stats. Identities = 33/154 (21%), Positives = 58/154 (37%), Gaps = 18/154 (11%) Query: 55 KIKALEVIIEKANAA-PIIVAYHFNSDLARLQKAFPQGRT----------LDKDPCTIQE 103 K++ ++ + +A +I+ F +A L++ Q L K I Sbjct: 502 KVRVAMDLLSELDAEDKVILFCEFKPTVAALKELCEQAGHGCVTLVGNDSLTKRQKAIDR 561 Query: 104 WN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFK 162 + + + A+ G G NL N + F L W + +Q +R + G Sbjct: 562 FQQDPDCRVFICTTAAAGTGNNLT-AANYVFFLGLPWTPGQQEQAEDR-----AYRNGQL 615 Query: 163 RAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 R V V + + TIDE + Q L K + L+ Sbjct: 616 RMVVVKIPLVEATIDEQLWQLLNAKRQVAQDLIE 649 >gi|145362201|ref|NP_973689.2| transcription regulatory protein SNF2, putative [Arabidopsis thaliana] gi|330255399|gb|AEC10493.1| SNF2 and helicase domain-containing protein [Arabidopsis thaliana] Length = 877 Score = 81.9 bits (201), Expect = 5e-14, Method: Composition-based stats. Identities = 38/232 (16%), Positives = 82/232 (35%), Gaps = 48/232 (20%) Query: 2 KQYHK-FQREL--YCDLQGENIEAFNSASKTVKCLQL--ANGAVY---------YDEEKH 47 K Y ++EL +L N S +QL A Y ++E +H Sbjct: 315 KIYTSILRKELPGLLELSSG---GSNHTSLQNIVIQLRKACSHPYLFPGIEPEPFEEGEH 371 Query: 48 WKEVHDEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQKAFPQGR----TLDKDPCTI 101 + K+ L+ ++++ + +++ S L LQ R LD Sbjct: 372 LVQ-ASGKLLVLDQLLKRLHDSGHRVLLFSQMTSTLDILQDFMELRRYSYERLDGSVRAE 430 Query: 102 QEWNE------------------GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEE 143 + + + + G GLNL + ++F+ W+ + Sbjct: 431 ERFAAIKNFSAKTERGLDSEVDGSNAFVFMISTRAGGVGLNL-VAADTVIFYEQDWNPQV 489 Query: 144 HQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 +Q ++R + G V L+ +++++E++L+R K + ++ Sbjct: 490 DKQALQR-----AHRIGQISHVLSINLVTEHSVEEVILRRAERKLQLSHNVV 536 >gi|254238775|ref|ZP_04932098.1| hypothetical protein PACG_04939 [Pseudomonas aeruginosa C3719] gi|126170706|gb|EAZ56217.1| hypothetical protein PACG_04939 [Pseudomonas aeruginosa C3719] Length = 676 Score = 81.9 bits (201), Expect = 5e-14, Method: Composition-based stats. Identities = 33/154 (21%), Positives = 58/154 (37%), Gaps = 18/154 (11%) Query: 55 KIKALEVIIEKANAA-PIIVAYHFNSDLARLQKAFPQGRT----------LDKDPCTIQE 103 K++ ++ + +A +I+ F +A L++ Q L K I Sbjct: 502 KVRVAMDLLSELDAEDKVILFCEFKPTVAALKELCEQAGLGCVTLVGNDSLTKRQKAIDR 561 Query: 104 WN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFK 162 + + + A+ G G NL N + F L W + +Q +R + G Sbjct: 562 FQQDPDCRVFICTTAAAGTGNNLT-AANYVFFLGLPWTPGQQEQAEDR-----AYRNGQL 615 Query: 163 RAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 R V V + + TIDE + Q L K + L+ Sbjct: 616 RMVVVKIPLVEATIDEQLWQLLNAKRQVAQDLIE 649 >gi|193671687|ref|XP_001946103.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1-like [Acyrthosiphon pisum] Length = 848 Score = 81.9 bits (201), Expect = 5e-14, Method: Composition-based stats. Identities = 23/157 (14%), Positives = 58/157 (36%), Gaps = 19/157 (12%) Query: 51 VHDEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQ---------KAFPQGRTLDKDPC 99 + K K L I+ +++ F L L+ G T ++ Sbjct: 668 LDSGKFKLLNEILPDLKDRGHRVLIFSQFLQILDLLEIYMSHYGHSYLRLDGSTQVQERQ 727 Query: 100 -TIQEWNEGK-IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 I +N + + + G G+NL +++ + ++ +Q +R Sbjct: 728 LMIDLYNMDESLFAFLLSTKAGGLGINLTAADTVIIH-DIDYNPYNDKQAEDRC-----H 781 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 + G + V V I++++++E + + + K ++ + Sbjct: 782 RVGQTKPVKVIKFISKDSVEESMFKVAQDKLNLEQQV 818 >gi|241707025|ref|XP_002412008.1| steroid receptor-interacting snf2 domain protein, putative [Ixodes scapularis] gi|215505018|gb|EEC14512.1| steroid receptor-interacting snf2 domain protein, putative [Ixodes scapularis] Length = 1055 Score = 81.5 bits (200), Expect = 5e-14, Method: Composition-based stats. Identities = 30/180 (16%), Positives = 59/180 (32%), Gaps = 35/180 (19%) Query: 52 HDEKIKALEVIIEKANAA--PIIVAYHFNSDLARLQKAFPQGRTLDK------------- 96 + K L I+E+ ++V S L +++ Q + Sbjct: 574 NSHKFLVLMTILEQTLGVGDKLLVFSQSLSTLDLVERFLGQREVPLRPGLPHGDKWARGR 633 Query: 97 -------------DPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLE 142 I E+N + L + G+NL G N +V W+ Sbjct: 634 NYFRLDGSTSAQEREKLINEYNANAGVSLFLLSTRAGCLGINLT-GANRIVVLDASWNPC 692 Query: 143 EHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKET 202 Q + RI + G + +Y L+ N +++ + R K + D +++ + E Sbjct: 693 HDAQAVCRI-----YRYGQAKPCHIYRLVCDNCLEKRIYDRQVNKQGMSDRVVDEMNPEA 747 >gi|302309993|ref|XP_451940.2| hypothetical protein [Kluyveromyces lactis NRRL Y-1140] gi|199424832|emb|CAH02333.2| KLLA0B09240p [Kluyveromyces lactis] Length = 798 Score = 81.5 bits (200), Expect = 5e-14, Method: Composition-based stats. Identities = 29/168 (17%), Positives = 59/168 (35%), Gaps = 23/168 (13%) Query: 44 EEKHWKEVHDEKIKAL-EVIIEKANAA---PIIVAYHFNSDLARLQKAFPQGR------- 92 W+ KI+AL E + + IV F S L ++ + Sbjct: 619 MGGKWR--SSTKIEALVEELYNLRSDKRTIKSIVFSQFTSMLDLVEWRLKRAGFQTVKLQ 676 Query: 93 ---TLDKDPCTIQEWNEG-KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMI 148 T + TI+ + E + + G LNL + + WW+ Q Sbjct: 677 GSMTPTQRDQTIKYFMENIHCEVFLVSLKAGGVALNLCEASQVFIL-DPWWNPSVEWQSG 735 Query: 149 ERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 +R+ + G R V + +++I+ +++ K+++ +N Sbjct: 736 DRV-----HRIGQFRPVKITRFCIEDSIESRIIELQEKKASMIHATIN 778 >gi|195172271|ref|XP_002026922.1| GL12824 [Drosophila persimilis] gi|194112690|gb|EDW34733.1| GL12824 [Drosophila persimilis] Length = 237 Score = 81.5 bits (200), Expect = 6e-14, Method: Composition-based stats. Identities = 23/105 (21%), Positives = 45/105 (42%), Gaps = 8/105 (7%) Query: 95 DKDPCTIQEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIG 152 + ++++N I + + G GLNLQ + +V F W+ + Q Sbjct: 25 EDRGELLRKFNAKGSDIFVFLLSTRAGGLGLNLQT-ADTVVIFDSDWNPHQDLQA----- 78 Query: 153 VTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 R + G + V V L+ N+++E +L R K + + ++ A Sbjct: 79 QDRAHRIGQRNEVRVLRLMTVNSVEERILAAARYKLNMDEKVIQA 123 >gi|70943765|ref|XP_741890.1| DNA helicase [Plasmodium chabaudi chabaudi] gi|56520554|emb|CAH80365.1| DNA helicase, putative [Plasmodium chabaudi chabaudi] Length = 644 Score = 81.5 bits (200), Expect = 6e-14, Method: Composition-based stats. Identities = 36/188 (19%), Positives = 70/188 (37%), Gaps = 41/188 (21%) Query: 46 KHWKEVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQKA----------FPQGRT 93 K V+ K++ L I++ N ++V + L ++K + T Sbjct: 435 KKDNFVYSTKLRILFDHIKEDIKNELHVVVFSQWIGFLKIIEKLLTLHEIPNKIYDGSLT 494 Query: 94 LDKDPCTIQEWN--EGKI---------------------PLLFAHPASCGHGLNLQYGGN 130 ++ T+ +N +GK+ +L + G GLNL + Sbjct: 495 YEQRKSTLYWFNIQKGKVYQPGIGFCQSTSDIPIENKSGKVLLCSLKAGGVGLNLTVS-S 553 Query: 131 ILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 + LWW+ Q ERI + G + V +Y + + T++E +LQ ++K Sbjct: 554 KVYLMDLWWNPAIEDQAFERI-----HRIGQLKDVNIYKFVLEKTVEERILQIHQSKQYT 608 Query: 191 QDLLLNAL 198 + L + Sbjct: 609 ANQCLAQV 616 >gi|325181157|emb|CCA15572.1| CHROMODOMAIN HELICASE DNA BINDING putative [Albugo laibachii Nc14] Length = 1918 Score = 81.5 bits (200), Expect = 6e-14, Method: Composition-based stats. Identities = 20/145 (13%), Positives = 51/145 (35%), Gaps = 18/145 (12%) Query: 67 NAAPIIVAYHFNSDLARLQ----------KAFPQGRTLDKDPCTIQEW--NEGKIPLLFA 114 +++ F L LQ + T ++ I + + ++ Sbjct: 785 GGHRVLIFSQFKIMLDILQDYLSLRGFKFERIDGNITGNERQAAIDRYCGTSNQAFVMLI 844 Query: 115 HPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQN 174 + G G+NL + ++ + W+ + Q R + G ++V +Y L+ Sbjct: 845 STRAGGVGINLT-AADTVIIYDSDWNPQNDLQAQARC-----HRIGQTKSVKIYRLLTSK 898 Query: 175 TIDELVLQRLRTKSTIQDLLLNALK 199 T + + + K + ++L ++ Sbjct: 899 TYELQMFHQASIKLGLDQVVLGGMQ 923 >gi|324500543|gb|ADY40253.1| ATP-dependent helicase brm [Ascaris suum] Length = 1261 Score = 81.5 bits (200), Expect = 6e-14, Method: Composition-based stats. Identities = 34/160 (21%), Positives = 60/160 (37%), Gaps = 22/160 (13%) Query: 55 KIKALEVIIEKAN--AAPIIVAYHFNSDLARLQKAFPQGRTL-----------DKDPCTI 101 K + L+ I+ K +++ S L + + F R D + Sbjct: 801 KFELLDRILLKLKVTGHRLLMFCQMTS-LMSIMEDFLIYRQYRYLRLDGNTKSDDREKLL 859 Query: 102 QEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQA 159 +N + + S G GLNLQ + +V F W+ + +Q +R + Sbjct: 860 DLYNAPQSEYFIFLLSTRSGGIGLNLQ-SADTVVIFDSDWNPHQDKQA-----ESRAHRI 913 Query: 160 GFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 G R V V LI N+I+E + + K I ++ A + Sbjct: 914 GQSREVRVLRLITVNSIEEKIQATAKCKLDIDKKVIQAGR 953 >gi|320592092|gb|EFX04531.1| DNA excision repair protein [Grosmannia clavigera kw1407] Length = 992 Score = 81.5 bits (200), Expect = 6e-14, Method: Composition-based stats. Identities = 24/140 (17%), Positives = 51/140 (36%), Gaps = 17/140 (12%) Query: 69 APIIVAYHFNSDLA----RLQKAFPQGRTLD------KDPCTIQEWNEG-KIPLLFAHPA 117 I+ F + L RL++A LD + +I+ + E + Sbjct: 839 HKSIIFSQFTTMLQLIEWRLRRAGITTVMLDGSMTPAQRQASIEYFKENVDVECFLVSLK 898 Query: 118 SCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 + G LNL + + WW+ Q +R + G R V L +++++ Sbjct: 899 AGGVALNLTEASRVFI-VDPWWNPAAEWQSADRC-----HRIGQTRPCVVTRLCIEDSVE 952 Query: 178 ELVLQRLRTKSTIQDLLLNA 197 ++ K+ + + +N+ Sbjct: 953 SRMVMLQEKKTKMINSTINS 972 >gi|308799669|ref|XP_003074615.1| Chromodomain-helicase-DNA-binding protein 6 (ISS) [Ostreococcus tauri] gi|116000786|emb|CAL50466.1| Chromodomain-helicase-DNA-binding protein 6 (ISS) [Ostreococcus tauri] Length = 1390 Score = 81.5 bits (200), Expect = 6e-14, Method: Composition-based stats. Identities = 26/172 (15%), Positives = 55/172 (31%), Gaps = 20/172 (11%) Query: 44 EEKHWKEVHDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQK----------AFPQG 91 + K++ L+ ++ + +V L L+ Sbjct: 611 ASTNILVSSSGKLQLLDKLLPHLREGGHRALVFSQMTRVLDVLEDYCRARGHSYVRLDGS 670 Query: 92 RTLDKDPCTIQEW--NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIE 149 T I + + L + G G+NL + ++ F W+ + Q + Sbjct: 671 VTGSARQEAIDHYCAEDSDTFLFLLSTRAGGQGINLVQ-ADTVIMFDSDWNPQNDAQALA 729 Query: 150 RIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 R + G R V VY L+ + + ++ + R K ++ + KE Sbjct: 730 R-----AHRIGQTRQVQVYRLVMRGSYEKEMFTRASMKLGLEQAIFGGADKE 776 >gi|296227865|ref|XP_002759553.1| PREDICTED: helicase-like transcription factor [Callithrix jacchus] Length = 1009 Score = 81.5 bits (200), Expect = 6e-14, Method: Composition-based stats. Identities = 27/158 (17%), Positives = 54/158 (34%), Gaps = 23/158 (14%) Query: 51 VHDEKIKALE----VIIEKANAAPIIVAYHFNSDLARLQ----------KAFPQGRTLDK 96 KI AL + +K +V F + L+ ++ K Sbjct: 830 TSSSKINALMHALTDLRKKNPNIKSLVVSQFTTFLSLIEIPLKASGFVFTRLDGSMAQKK 889 Query: 97 DPCTIQEWNE---GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGV 153 +IQ + G ++ + G GLNL + + W+ Q +R Sbjct: 890 RVESIQCFQNTEAGSPTIMLLSLKAGGVGLNL-SAASRVFLMDPAWNPAAEDQCFDRC-- 946 Query: 154 TRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQ 191 + G K+ V + I +++++E +L+ K + Sbjct: 947 ---HRLGQKQEVIITKFIVKDSVEENMLKIQNKKRELA 981 >gi|291241069|ref|XP_002740438.1| PREDICTED: transcriptional regulator ATRX-like [Saccoglossus kowalevskii] Length = 1981 Score = 81.5 bits (200), Expect = 6e-14, Method: Composition-based stats. Identities = 39/207 (18%), Positives = 77/207 (37%), Gaps = 33/207 (15%) Query: 10 ELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAA 69 E+ NIE + LQL+ ++ V + + +L IIE Sbjct: 1585 EIVTPEDAYNIELGGKLVLLMDVLQLS------EDIGDKVLVFSQSLLSL-DIIED---- 1633 Query: 70 PIIVAYHFNSDLA-----------RLQKAFPQGRTLDKDPCTIQE-WNEGKI---PLLFA 114 + ++ A + G T ++ Q+ +N+ + L Sbjct: 1634 -FLEYIETKAEEANTGDGEGAWVKGIDYFRMDGSTSAQNRKAFQDLFNDPENLRARLFLI 1692 Query: 115 HPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQN 174 + G+NL N ++ F W+ Q I R+ + G +A F+Y +AQ Sbjct: 1693 STKAGSLGINL-VSANRVIIFDASWNPTHDVQSIFRV-----YRFGQTKACFIYRFLAQG 1746 Query: 175 TIDELVLQRLRTKSTIQDLLLNALKKE 201 T++E + +R TK ++ +++ + E Sbjct: 1747 TMEEKIYERQVTKQSLSRRVVDQFQIE 1773 >gi|256070527|ref|XP_002571594.1| hypothetical protein [Schistosoma mansoni] gi|238656738|emb|CAZ27824.1| hypothetical conserved protein [Schistosoma mansoni] Length = 1266 Score = 81.5 bits (200), Expect = 6e-14, Method: Composition-based stats. Identities = 25/105 (23%), Positives = 47/105 (44%), Gaps = 8/105 (7%) Query: 96 KDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGV 153 + I +N+ K P L + G+NL G N +V F W+ Q + Sbjct: 1046 EREKLINNFNDPKNPAKLFLMSTRAGCLGVNL-IGANRVVVFDASWNPCHDCQAV----- 1099 Query: 154 TRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNAL 198 R + G + ++Y L++ NT+++ + R TK + D +++ L Sbjct: 1100 CRVYRYGQVKPCYIYRLVSDNTMEKKIYDRQVTKQGMSDRVVDEL 1144 >gi|46137411|ref|XP_390397.1| hypothetical protein FG10221.1 [Gibberella zeae PH-1] Length = 1023 Score = 81.5 bits (200), Expect = 6e-14, Method: Composition-based stats. Identities = 27/138 (19%), Positives = 46/138 (33%), Gaps = 17/138 (12%) Query: 66 ANAAPIIVAYHFNSDLARLQKAFPQGR----------TLDKDPCTIQEWNEGKIP-LLFA 114 +N ++V H L L F + + + +N + Sbjct: 563 SNGDKVLVFSHSVRLLRILHHLFTNTSYTVSYLDGSLSYEVRQEVVDTFNSDPTQFVFLI 622 Query: 115 HPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQN 174 + G GLN+ N +V W+ Q R + G R V V+ LI+ Sbjct: 623 STKAGGVGLNIT-SANKVVIIDPHWNPSYDLQA-----QDRAYRIGQTRDVEVFRLISLG 676 Query: 175 TIDELVLQRLRTKSTIQD 192 T++E+V R K + Sbjct: 677 TVEEIVYARQIYKQQQAN 694 >gi|328872521|gb|EGG20888.1| SNF2-related domain-containing protein [Dictyostelium fasciculatum] Length = 2077 Score = 81.5 bits (200), Expect = 6e-14, Method: Composition-based stats. Identities = 27/114 (23%), Positives = 48/114 (42%), Gaps = 9/114 (7%) Query: 86 KAFPQGRTLDKDPC-TIQEWNE--GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLE 142 G T +D I ++N+ I L + G NL GG ++ F L W+ Sbjct: 1852 YFRLDGTTRPQDRQIMIHKYNDLTNSIKLFLISTKAGSLGTNLT-GGTRVILFDLMWNPV 1910 Query: 143 EHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 +Q + R + G + V+VY +I T++E + RL +K + ++ Sbjct: 1911 HERQAVFRCF-----RIGQTKPVYVYTIITAATLEENMYPRLISKQQLAKRTID 1959 >gi|313211798|emb|CBY15966.1| unnamed protein product [Oikopleura dioica] Length = 602 Score = 81.5 bits (200), Expect = 6e-14, Method: Composition-based stats. Identities = 37/207 (17%), Positives = 76/207 (36%), Gaps = 31/207 (14%) Query: 15 LQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDE------------KIKALEVI 62 ++ +E + K QL + + +E+ K ++ K++AL + Sbjct: 127 VRDALLEGAHCFGILAKLRQLVSHPYFVGDEETGKITEEQISRSIKKPLISGKMQALLSL 186 Query: 63 IE--KANAAPIIVAYHFNSDLARL-----QKAFPQGRTLDKDPCT-----IQEWNE-GKI 109 + + ++V L + + P + P + I E+N+ Sbjct: 187 LGGWRKQKRKVLVFCQCLPSLKMIVGMCNRNYVPVLSIYGQTPVSTRQMLINEFNDSPDA 246 Query: 110 PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYY 169 + G GLN+ +G V F W+ + +Q RI + V +Y Sbjct: 247 FAMVMTSRVGGVGLNI-HGATRTVIFEPDWNPGQDEQAAARI-----HRPQQTDNVAIYR 300 Query: 170 LIAQNTIDELVLQRLRTKSTIQDLLLN 196 LI ++I+E + QR K ++ +L+ Sbjct: 301 LITNDSIEEWIYQRQIYKHSVAQHVLS 327 >gi|195341840|ref|XP_002037513.1| GM18271 [Drosophila sechellia] gi|194132363|gb|EDW53931.1| GM18271 [Drosophila sechellia] Length = 1420 Score = 81.5 bits (200), Expect = 6e-14, Method: Composition-based stats. Identities = 20/102 (19%), Positives = 42/102 (41%), Gaps = 7/102 (6%) Query: 96 KDPCTIQEWNEG-KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 + + E+N + L + G+NL G N ++ F W+ Q + RI Sbjct: 836 ERERLVNEFNANSNVKLFLISTRAGSLGINLT-GANRVIIFDASWNPCHDTQAVYRI--- 891 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + G + FVY ++ +++ + R K + D +++ Sbjct: 892 --YRYGQTKPCFVYRIVMDKCLEKKIYDRQIKKQGMSDRIVD 931 >gi|330924634|ref|XP_003300716.1| hypothetical protein PTT_12049 [Pyrenophora teres f. teres 0-1] gi|311325001|gb|EFQ91184.1| hypothetical protein PTT_12049 [Pyrenophora teres f. teres 0-1] Length = 1117 Score = 81.5 bits (200), Expect = 6e-14, Method: Composition-based stats. Identities = 32/173 (18%), Positives = 62/173 (35%), Gaps = 31/173 (17%) Query: 51 VHDEKIKALEVIIEK--------ANAAPI--IVAYHFNSDLARLQKAFPQG--------- 91 K KAL +++ N PI IV + + L ++ A Sbjct: 935 GPHTKTKALLDDLDEFRQWSDQNPNERPIKSIVFSSWTTHLDLIEIALKNAGHTLVRLDG 994 Query: 92 ----RTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQM 147 DK ++E + I ++ + G GLNL N + ++ Q Sbjct: 995 RMTRENRDKSMQALRE--DSSIRVMLVSIGAGGLGLNLTT-ANKVFMMEPQFNPAAEAQA 1051 Query: 148 IERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKK 200 ++R+ + G R V + I + +E +L+ K + D+ ++ +K Sbjct: 1052 VDRV-----HRLGQDREVTIKRFIMNGSFEEKMLELQNKKRDLADMTMSRERK 1099 >gi|326671144|ref|XP_691636.4| PREDICTED: SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1-like [Danio rerio] Length = 1020 Score = 81.5 bits (200), Expect = 6e-14, Method: Composition-based stats. Identities = 23/161 (14%), Positives = 56/161 (34%), Gaps = 19/161 (11%) Query: 47 HWKEVHDEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQ----------KAFPQGRTL 94 + K+ L ++ +++ F L L+ + Sbjct: 841 TDVLLDSGKLSLLTQLLNSLKEKGDRVVLFSQFTMMLDILEVFLRHHKHRYNRLDGSTPM 900 Query: 95 DKDPCTIQEWNEG-KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGV 153 I ++N I + + G G+NL N+++ + + +Q R Sbjct: 901 SDRIGLIDQFNTDQDIFVFLLSTRAGGLGINLT-SANVVILHDIDCNPYNDKQAEGRC-- 957 Query: 154 TRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 + G + V V LI++++I++ +L+ K ++ + Sbjct: 958 ---HRVGQTKTVKVIKLISKDSIEDTMLRIGERKLKLEQEM 995 >gi|16943790|emb|CAD10805.1| SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 3 [Homo sapiens] Length = 1009 Score = 81.5 bits (200), Expect = 6e-14, Method: Composition-based stats. Identities = 27/163 (16%), Positives = 56/163 (34%), Gaps = 19/163 (11%) Query: 42 YDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQ----------KAFPQG 91 D E + + AL + +K +V F + L+ ++ Sbjct: 825 SDMEWTSSSKINALMHALTDLRKKNPNIKSLVVSQFTTFLSLIEIPLKASGFVFTRLDGS 884 Query: 92 RTLDKDPCTIQEWNE---GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMI 148 K +IQ + G ++ + G GLNL + + W+ Q Sbjct: 885 MAQKKRVESIQCFQNTEAGSPTIMLLSLRAGGVGLNL-SAASRVFLMDPAWNPAAEDQCF 943 Query: 149 ERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQ 191 +R + G K+ V + I +++++E +L+ K + Sbjct: 944 DRC-----HRLGQKQEVIITKFIVKDSVEENMLKIQNKKRELA 981 >gi|107099852|ref|ZP_01363770.1| hypothetical protein PaerPA_01000872 [Pseudomonas aeruginosa PACS2] gi|37955686|gb|AAP22525.1| putative helicase [Pseudomonas aeruginosa] Length = 657 Score = 81.5 bits (200), Expect = 6e-14, Method: Composition-based stats. Identities = 33/154 (21%), Positives = 58/154 (37%), Gaps = 18/154 (11%) Query: 55 KIKALEVIIEKANAA-PIIVAYHFNSDLARLQKAFPQGRT----------LDKDPCTIQE 103 K++ ++ + +A +I+ F +A L++ Q L K I Sbjct: 493 KVRVAMDLLSELDAEDKVILFCEFKPTVAALKELCEQAGHGCVTLVGNDSLTKRQKAIDR 552 Query: 104 WN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFK 162 + + + A+ G G NL N + F L W + +Q +R + G Sbjct: 553 FQQDPDCRVFICTTAAAGTGNNLT-AANYVFFLGLPWTPGQQEQAEDR-----AYRNGQL 606 Query: 163 RAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 R V V + + TIDE + Q L K + L+ Sbjct: 607 RMVVVKIPLVEATIDEQLWQLLNAKRQVAQDLIE 640 >gi|325675298|ref|ZP_08154983.1| helicase [Rhodococcus equi ATCC 33707] gi|325554004|gb|EGD23681.1| helicase [Rhodococcus equi ATCC 33707] Length = 585 Score = 81.5 bits (200), Expect = 6e-14, Method: Composition-based stats. Identities = 37/206 (17%), Positives = 64/206 (31%), Gaps = 21/206 (10%) Query: 3 QYHKFQRELYCDLQGENIEAFN-SASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEV 61 Y E D G IE + Q+ N E K+ Sbjct: 359 IYDVLLAEAVDDGFGAGIERHGRVLAVLTALKQVCNHPGLITGEMDSLAGRSGKLDLCTD 418 Query: 62 II--EKANAAPIIVAYHFNSDLARLQKAFPQ------------GRTLDKDPCTIQEWNEG 107 I+ +P ++ + L + + R ++ + +E Sbjct: 419 IVATNMETGSPTLIFTQYRRTGEMLVRHLAEQFDVAAPFLHGGLRQSERAEIVSRFQSED 478 Query: 108 KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFV 167 P+L + G GL L + +V F WW+ Q +R + G R V V Sbjct: 479 GPPVLVLSLRAAGTGLTLTRAAD-VVHFDRWWNPAVEAQASDR-----AHRIGQTRTVTV 532 Query: 168 YYLIAQNTIDELVLQRLRTKSTIQDL 193 L + T++E + K+ + DL Sbjct: 533 TTLTSTTTVEEHIAGMHGRKAALTDL 558 >gi|225680964|gb|EEH19248.1| SNF2 family helicase/ATPase [Paracoccidioides brasiliensis Pb03] Length = 663 Score = 81.5 bits (200), Expect = 6e-14, Method: Composition-based stats. Identities = 32/162 (19%), Positives = 63/162 (38%), Gaps = 19/162 (11%) Query: 46 KHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAF---------PQGRTL 94 K+ + + K+ L ++ + N ++ F + L+ G T Sbjct: 455 KNDEWMQSGKVDKLCELLRRFKENGDRTLIFSQFTMVMDILEHVLQTVQMPFFRLDGSTS 514 Query: 95 DKDPCTI-QEWNEG-KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIG 152 +D I ++E +IP+ + G G+NL N ++ F ++ +E Q Sbjct: 515 VEDRQAILDAFHEQVEIPVFLLSTKAGGAGVNL-ACANKVIIFDSSFNPQEDVQA----- 568 Query: 153 VTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 R + G R V V L+ + TI+E + +TK + + Sbjct: 569 ENRAHRVGQTREVEVVRLVTRGTIEEQMYALGQTKLALDQRV 610 >gi|14548140|gb|AAK66797.1|U40238_20 SWI/SNF family helicase [uncultured crenarchaeote 4B7] Length = 570 Score = 81.5 bits (200), Expect = 6e-14, Method: Composition-based stats. Identities = 31/110 (28%), Positives = 51/110 (46%), Gaps = 6/110 (5%) Query: 87 AFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 + G+T I + +G+ L+ A + G+NL ++F L W H+Q Sbjct: 440 SIIGGQTDVVRQREIDRFQKGQTKLMIAGLRAGNVGINLTT-AKYVIFAELDWSPAIHRQ 498 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 +R+ + G K VF YYL+ + T+DE V + L KS D +L+ Sbjct: 499 AEDRL-----HRIGQKNTVFAYYLVGKGTLDEHVAEILVDKSYEIDTILD 543 >gi|310641398|ref|YP_003946156.1| helicase protein [Paenibacillus polymyxa SC2] gi|309246348|gb|ADO55915.1| Helicase protein [Paenibacillus polymyxa SC2] Length = 630 Score = 81.5 bits (200), Expect = 6e-14, Method: Composition-based stats. Identities = 33/156 (21%), Positives = 67/156 (42%), Gaps = 17/156 (10%) Query: 52 HDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAF--------PQGRTLDKDPCT-IQ 102 + K + +I K N +I+ + + L F P +++ + Sbjct: 375 ANSKAEKALELIRKMNEK-VIIFTEYRATQEYLLNYFRDRGLSAVPYRGGMNRGRKDWMM 433 Query: 103 EWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFK 162 + G+I ++ A + G G+NLQ+ + ++ F L W+ +Q I R+ + G K Sbjct: 434 DLFRGRIQVMIA-TEAGGEGINLQF-CHHMINFDLPWNPMRVEQRIGRV-----HRLGQK 486 Query: 163 RAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNAL 198 V ++ L TI+E +L L K + ++++ L Sbjct: 487 HDVNIFNLSTTGTIEEHILHLLHEKINMFEMVIGGL 522 >gi|307109767|gb|EFN58004.1| hypothetical protein CHLNCDRAFT_34395 [Chlorella variabilis] Length = 1019 Score = 81.5 bits (200), Expect = 6e-14, Method: Composition-based stats. Identities = 39/223 (17%), Positives = 84/223 (37%), Gaps = 38/223 (17%) Query: 6 KFQRELYCDLQGENIEAFNSASKTVKCL----QL---ANGAVYYD--EEKHWKEVHDE-- 54 + QR+ Y L ++++A + + L QL N + E D Sbjct: 356 EMQRKYYAALLQKDMDAVTGGADRSRLLNIVMQLRKCCNHPYLFQGAEPGPPYLTGDHLV 415 Query: 55 ----KIKALEVIIEKAN--AAPIIVAYHFNSDLARLQ---------KAFPQGRTLDKD-P 98 K+ L+ ++ K + +++ + L+ G T +D Sbjct: 416 ENAGKMVLLDKLLPKLQSRGSRVLIFSQMTRMIDILEDYCLYRQYGYCRIDGNTSGEDRE 475 Query: 99 CTIQEWN--EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 I ++N G + + G G+NL Y +I++ + W+ + Q ++R Sbjct: 476 SQIDDYNKASGGRFVFLLSTRAGGLGINL-YTADIVILYDSDWNPQMDLQAMDR-----A 529 Query: 157 RQAGFKRAVFVYYLIAQNTIDEL---VLQRLRTKSTIQDLLLN 196 + G K+ V V+ ++I+E V+++ K + L++ Sbjct: 530 HRIGQKKEVQVFRFCTDHSIEEKATCVIEKAYKKLRLDALVIQ 572 >gi|170048582|ref|XP_001853354.1| transcriptional regulator ATRX [Culex quinquefasciatus] gi|167870647|gb|EDS34030.1| transcriptional regulator ATRX [Culex quinquefasciatus] Length = 1334 Score = 81.5 bits (200), Expect = 6e-14, Method: Composition-based stats. Identities = 21/90 (23%), Positives = 40/90 (44%), Gaps = 6/90 (6%) Query: 107 GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVF 166 G L + G G+NL N ++ F + W+ Q I R+ + G + + Sbjct: 978 GDKLLFLISTRAGGLGINL-VAANRVIIFDVSWNPSHDIQSIFRV-----YRFGQVKPCY 1031 Query: 167 VYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 +Y +A T++E + +R TK I +++ Sbjct: 1032 IYRFLAMGTMEEKIYERQVTKQAISKRVID 1061 >gi|170102282|ref|XP_001882357.1| SNF2 superfamily protein [Laccaria bicolor S238N-H82] gi|164642729|gb|EDR06984.1| SNF2 superfamily protein [Laccaria bicolor S238N-H82] Length = 1341 Score = 81.5 bits (200), Expect = 6e-14, Method: Composition-based stats. Identities = 28/160 (17%), Positives = 60/160 (37%), Gaps = 21/160 (13%) Query: 48 WKEVHDEKIKALEVI----IEKANAAPIIVAYHFNSDLARLQKAFPQGRTL--------- 94 K + K+K + + IEK ++ + L+ + + + Sbjct: 1154 PKFLPSTKMKFMMEVLIKGIEKRPEEKTLIISQWTGCLSLVSAYLTEKGIIHVKYQGDMN 1213 Query: 95 -DKDPCTIQEW-NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIG 152 +K ++ + ++ K ++ G GLNL N ++ L W Q +R+ Sbjct: 1214 RNKRDQAVRVFMSKDKARVMLMSLKCGGVGLNLTRANN-VISLDLGWSRAIEDQAFDRV- 1271 Query: 153 VTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQD 192 + G R V V L+ +T+++ +L K ++ D Sbjct: 1272 ----HRLGQTRPVEVQRLVIADTVEDRLLNIQERKQSLAD 1307 >gi|195127720|ref|XP_002008316.1| GI13420 [Drosophila mojavensis] gi|193919925|gb|EDW18792.1| GI13420 [Drosophila mojavensis] Length = 1723 Score = 81.5 bits (200), Expect = 6e-14, Method: Composition-based stats. Identities = 22/105 (20%), Positives = 44/105 (41%), Gaps = 8/105 (7%) Query: 95 DKDPCTIQEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIG 152 + ++++N + + G GLNLQ + +V F W+ + Q Sbjct: 1230 EDRGELLRKFNAKGSDYFVFLLSTRAGGLGLNLQT-ADTVVIFDSDWNPHQDLQA----- 1283 Query: 153 VTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 R + G + V V L+ N+++E +L R K + + ++ A Sbjct: 1284 QDRAHRIGQRNEVRVLRLMTVNSVEERILAAARYKLNMDEKVIQA 1328 >gi|575251|emb|CAA86571.1| helicase-like transcription factor [Homo sapiens] Length = 1009 Score = 81.5 bits (200), Expect = 7e-14, Method: Composition-based stats. Identities = 27/163 (16%), Positives = 56/163 (34%), Gaps = 19/163 (11%) Query: 42 YDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQ----------KAFPQG 91 D E + + AL + +K +V F + L+ ++ Sbjct: 825 SDMEWTSSSKINALMHALTDLRKKNPNIKSLVVSQFTTFLSLIEIPLKASGFVFTRLDGS 884 Query: 92 RTLDKDPCTIQEWNE---GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMI 148 K +IQ + G ++ + G GLNL + + W+ Q Sbjct: 885 MAQKKRVESIQCFQNTEAGSPTIMLLSLRAGGVGLNL-SAASRVFLMDPAWNPAAEDQCF 943 Query: 149 ERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQ 191 +R + G K+ V + I +++++E +L+ K + Sbjct: 944 DRC-----HRLGQKQEVIITKFIVKDSVEENMLKIQNKKRELA 981 >gi|47229701|emb|CAG06897.1| unnamed protein product [Tetraodon nigroviridis] Length = 1219 Score = 81.5 bits (200), Expect = 7e-14, Method: Composition-based stats. Identities = 30/180 (16%), Positives = 67/180 (37%), Gaps = 39/180 (21%) Query: 52 HDEKIKALEVIIEKANAA--PIIVAYHFNSDLARLQKAFPQ-----------------GR 92 + K+ L +IE++ ++V S L+ ++ + R Sbjct: 627 NSAKMVLLFHLIEESVKKRDKLLVFSQSLSTLSVIEDFLSKRPMPSGITSSEPRSQNWVR 686 Query: 93 TLD-----------KDPCTIQEWNEGKIP---LLFAHPASCGHGLNLQYGGNILVFFSLW 138 L+ + I ++N+ + + + G+NL G N +V F Sbjct: 687 NLNYYRLDGSTSASERERLINQFNDPENNTAWIFLLSTRAGCLGVNL-IGANRVVVFDAS 745 Query: 139 WDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNAL 198 W+ Q + R + G ++ F+Y L+ T+++ + R +K + D +++ L Sbjct: 746 WNPCHDAQAV-----CRVYRYGQRKPCFIYRLVCDFTLEKKIYDRQVSKQGMSDRVVDDL 800 >gi|269860637|ref|XP_002650038.1| SWF/SNF family helicase [Enterocytozoon bieneusi H348] gi|220066525|gb|EED44003.1| SWF/SNF family helicase [Enterocytozoon bieneusi H348] Length = 1176 Score = 81.5 bits (200), Expect = 7e-14, Method: Composition-based stats. Identities = 20/142 (14%), Positives = 45/142 (31%), Gaps = 16/142 (11%) Query: 67 NAAPIIVAYHFNSDLARLQKAFPQGRTL----------DKDPCTIQEWNEGKIPLLFAHP 116 +++ L L + + D I ++ + Sbjct: 603 GKHKVLIFSQMTKCLDLLSEYLSYRKFKYERIDGSIRGDLRQAAIDRFSTEDSFVFLLCT 662 Query: 117 ASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTI 176 + G G+NL + + F W+ + Q R + G K V +Y L+ +N+ Sbjct: 663 RAGGVGINLT-AADTCIIFDSDWNPQNDLQAQARC-----HRIGQKNQVKIYRLVTKNSY 716 Query: 177 DELVLQRLRTKSTIQDLLLNAL 198 + + + K + +L + Sbjct: 717 EREMFDKAGMKLGLDKAVLQKM 738 >gi|198423144|ref|XP_002119349.1| PREDICTED: similar to transcriptional regulator ATRX [Ciona intestinalis] Length = 1357 Score = 81.5 bits (200), Expect = 7e-14, Method: Composition-based stats. Identities = 38/202 (18%), Positives = 76/202 (37%), Gaps = 19/202 (9%) Query: 8 QRELYCDLQGENI-EAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVII--- 63 + E Y + G+++ + N+ K ++ A D++ + +E ++ Sbjct: 728 ENEWYSSIVGKDVADDQNAGGKLAVLFEILRLAHECDDKILVFSQSLLSLDLIEEMLALS 787 Query: 64 -----EKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCT-IQEWNE---GKIPLLFA 114 + I + L G +L K I E+N+ + L Sbjct: 788 TVKVLSQLEDGKISTEIDYRKWYKNLDYFRMDGSSLGKSRQRWINEFNDETDRRARLFLI 847 Query: 115 HPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQN 174 + G+NL N +V F W+ Q I R+ + G + ++Y LIAQ Sbjct: 848 STKAGSLGVNL-VAANRVVIFDASWNPSHDIQSIFRV-----YRFGQAKCCYIYRLIAQG 901 Query: 175 TIDELVLQRLRTKSTIQDLLLN 196 T++E + R TK ++ +++ Sbjct: 902 TMEEKIYDRQVTKQSLSFRVVD 923 >gi|325091158|gb|EGC44468.1| DNA repair protein RAD5 [Ajellomyces capsulatus H88] Length = 1196 Score = 81.5 bits (200), Expect = 7e-14, Method: Composition-based stats. Identities = 33/183 (18%), Positives = 54/183 (29%), Gaps = 46/183 (25%) Query: 52 HDEKIKALEV-IIEKANAAPIIVAYHFNSDLARL-----QKAFPQGRTLDK--------- 96 KI AL + + +V F S L + + P R Sbjct: 994 TSAKIHALISHLTDLPPNTKSVVFSQFTSFLDLIGPQLTRAGIPYLRFDGTMAQKARSAV 1053 Query: 97 ----------DPCTIQEWNEGKIP---------------LLFAHPASCGHGLNLQYGGNI 131 D ++ N + +L + G GLNL N Sbjct: 1054 LAKFTSAHFPDEEDDEDGNNKRQSKFPSSRSHVKAPPPNVLLISLRAGGVGLNLT-AANQ 1112 Query: 132 LVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQ 191 + WW Q I+R+ + G + V V I +++I+ +L+ K I Sbjct: 1113 VFMMDPWWSFATEAQAIDRV-----HRMGQLKDVSVTRFIVKDSIEGRILRIQERKMMIA 1167 Query: 192 DLL 194 L Sbjct: 1168 GSL 1170 >gi|240275323|gb|EER38837.1| DNA repair protein rad5 [Ajellomyces capsulatus H143] Length = 1034 Score = 81.5 bits (200), Expect = 7e-14, Method: Composition-based stats. Identities = 33/183 (18%), Positives = 54/183 (29%), Gaps = 46/183 (25%) Query: 52 HDEKIKALEV-IIEKANAAPIIVAYHFNSDLARL-----QKAFPQGRTLDK--------- 96 KI AL + + +V F S L + + P R Sbjct: 832 TSAKIHALISHLTDLPPNTKSVVFSQFTSFLDLIGPQLTRAGIPYLRFDGTMAQKARSAV 891 Query: 97 ----------DPCTIQEWNEGKIP---------------LLFAHPASCGHGLNLQYGGNI 131 D ++ N + +L + G GLNL N Sbjct: 892 LAKFTSAHFPDEEDDEDGNNKRQSKFPSSRSHVKAPPPNVLLISLRAGGVGLNLT-AANQ 950 Query: 132 LVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQ 191 + WW Q I+R+ + G + V V I +++I+ +L+ K I Sbjct: 951 VFMMDPWWSFATEAQAIDRV-----HRMGQLKDVSVTRFIVKDSIEGRILRIQERKMMIA 1005 Query: 192 DLL 194 L Sbjct: 1006 GSL 1008 >gi|225561718|gb|EEH09998.1| DNA repair protein rad5 [Ajellomyces capsulatus G186AR] Length = 1196 Score = 81.5 bits (200), Expect = 7e-14, Method: Composition-based stats. Identities = 33/183 (18%), Positives = 54/183 (29%), Gaps = 46/183 (25%) Query: 52 HDEKIKALEV-IIEKANAAPIIVAYHFNSDLARL-----QKAFPQGRTLDK--------- 96 KI AL + + +V F S L + + P R Sbjct: 994 TSAKIHALISHLTDLPPNTKSVVFSQFTSFLDLIGPQLTRAGIPYLRFDGTMAQKARSAV 1053 Query: 97 ----------DPCTIQEWNEGKIP---------------LLFAHPASCGHGLNLQYGGNI 131 D ++ N + +L + G GLNL N Sbjct: 1054 LAKFTSAHFPDEEDDEDGNNKRQSKFPSSRSHVKAPPPNVLLISLRAGGVGLNLT-AANQ 1112 Query: 132 LVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQ 191 + WW Q I+R+ + G + V V I +++I+ +L+ K I Sbjct: 1113 VFMMDPWWSFATEAQAIDRV-----HRMGQLKDVSVTRFIVKDSIEGRILRIQERKMMIA 1167 Query: 192 DLL 194 L Sbjct: 1168 GSL 1170 >gi|85097277|ref|XP_960412.1| hypothetical protein NCU11284 [Neurospora crassa OR74A] gi|28921903|gb|EAA31176.1| conserved hypothetical protein [Neurospora crassa OR74A] gi|39979195|emb|CAE85566.1| conserved hypothetical protein [Neurospora crassa] Length = 1197 Score = 81.5 bits (200), Expect = 7e-14, Method: Composition-based stats. Identities = 30/159 (18%), Positives = 53/159 (33%), Gaps = 20/159 (12%) Query: 53 DEKIKALEVIIE-KANAAPIIVAYHFNSDLAR----LQKAFPQGRTLDKDPCTIQEWNE- 106 KI L I+ +A IV F S L L+ P + + D + E Sbjct: 962 SSKIHELIAILRREAPTHKFIVFSQFTSMLDLVEPFLRHHLPDIKHVRYDGKMSNDAREA 1021 Query: 107 --------GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQ 158 + +L GLNL ++ +W+ +Q I+R+ + Sbjct: 1022 SLHSLRKDPRTRILLCSLKCGSLGLNLT-AATRVIIVEPFWNPFVEEQAIDRV-----HR 1075 Query: 159 AGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 V VY L + T++ +L+ K + + Sbjct: 1076 LTQTVDVVVYKLTVRGTVEARILELQEKKRLLAQTAVEG 1114 >gi|116052602|ref|YP_792917.1| putative DNA helicase [Pseudomonas aeruginosa UCBPP-PA14] gi|32481700|gb|AAP84214.1| DNA helicase [Pseudomonas aeruginosa PA14] gi|115587823|gb|ABJ13838.1| putative DNA helicase [Pseudomonas aeruginosa UCBPP-PA14] Length = 657 Score = 81.5 bits (200), Expect = 7e-14, Method: Composition-based stats. Identities = 33/154 (21%), Positives = 58/154 (37%), Gaps = 18/154 (11%) Query: 55 KIKALEVIIEKANAA-PIIVAYHFNSDLARLQKAFPQGRT----------LDKDPCTIQE 103 K++ ++ + +A +I+ F +A L++ Q L K I Sbjct: 493 KVRVAMDLLSELDAEDKVILFCEFKPTVAALKELCEQAGHGCVTLVGNDSLTKRQKAIDR 552 Query: 104 WN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFK 162 + + + A+ G G NL N + F L W + +Q +R + G Sbjct: 553 FQQDPDCRVFICTTAAAGTGNNLT-AANYVFFLGLPWTPGQQEQAEDR-----AYRNGQL 606 Query: 163 RAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 R V V + + TIDE + Q L K + L+ Sbjct: 607 RMVVVKIPLVEATIDEQLWQLLNAKRQVAQDLIE 640 >gi|145512521|ref|XP_001442177.1| hypothetical protein [Paramecium tetraurelia strain d4-2] gi|124409449|emb|CAK74780.1| unnamed protein product [Paramecium tetraurelia] Length = 1014 Score = 81.5 bits (200), Expect = 7e-14, Method: Composition-based stats. Identities = 22/138 (15%), Positives = 53/138 (38%), Gaps = 18/138 (13%) Query: 71 IIVAYHFNSDLARLQK----------AFPQGRTLDKDPCTIQEWNEGKIP--LLFAHPAS 118 +++ F L L+ + + I E+ + + + Sbjct: 466 VLIFSQFTMMLNILEDYCNYRKYDYCRIDGETEIQQRDDQIAEFTKPDSKKFIFLLSTRA 525 Query: 119 CGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDE 178 G G+NL + ++ + ++ + Q ++R + G K V VY + ++TI+E Sbjct: 526 GGLGINL-ATADTVIIYDSDFNPQMDMQAMDR-----AHRIGQKNRVMVYRMACEHTIEE 579 Query: 179 LVLQRLRTKSTIQDLLLN 196 +++R + K L++ Sbjct: 580 KIIERQQIKLRWDSLMIQ 597 >gi|168035589|ref|XP_001770292.1| SNF2 family DNA-dependent ATPase [Physcomitrella patens subsp. patens] gi|162678509|gb|EDQ64967.1| SNF2 family DNA-dependent ATPase [Physcomitrella patens subsp. patens] Length = 1031 Score = 81.5 bits (200), Expect = 7e-14, Method: Composition-based stats. Identities = 27/140 (19%), Positives = 53/140 (37%), Gaps = 18/140 (12%) Query: 69 APIIVAYHFNSDLARL---------QKAFPQGRTL-DKDPCTIQEWNEG--KIPLLFAHP 116 + +++ L L Q G T D +I ++N + Sbjct: 485 SRVLIFSQMTRLLDILEDYCQFRSYQYCRIDGNTSGDDRESSIDQFNAPNSEKFCFLLST 544 Query: 117 ASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTI 176 + G G+NL +I++ + W+ + Q R + G K+ V V+ + TI Sbjct: 545 RAGGLGINL-ATADIVILYDSDWNPQVDLQA-----QDRAHRIGQKKEVQVFRFCTEFTI 598 Query: 177 DELVLQRLRTKSTIQDLLLN 196 +E V++R K + L++ Sbjct: 599 EEKVIERAYKKLALDALVIQ 618 >gi|326678432|ref|XP_002666261.2| PREDICTED: zinc finger Ran-binding domain-containing protein 3-like [Danio rerio] Length = 607 Score = 81.5 bits (200), Expect = 7e-14, Method: Composition-based stats. Identities = 31/156 (19%), Positives = 59/156 (37%), Gaps = 20/156 (12%) Query: 58 ALEVIIE---KANAAPIIVAYHFNSDLARLQKAFPQGRT-----------LDKDPCTIQE 103 A++ I+ ++ +V H S L +A + + ++ + Sbjct: 22 AVKDYIKMMLESEQLKFLVFAHHLSMLQACTEAVIEAKAGYIRIDGSVPSAERIQLVHRF 81 Query: 104 WNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKR 163 N+ + + G GL + +VF L+W+ +Q +R + G Sbjct: 82 QNDPDTRVAVLSIQAAGQGLTFT-AASHVVFAELYWNPGHIKQAEDR-----AHRIGQTA 135 Query: 164 AVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 V ++YLIA+ T D ++ L K T+ LN K Sbjct: 136 TVHIHYLIAKGTFDTVMWAMLNRKETVTGSALNGKK 171 >gi|330800474|ref|XP_003288261.1| hypothetical protein DICPUDRAFT_97966 [Dictyostelium purpureum] gi|325081717|gb|EGC35223.1| hypothetical protein DICPUDRAFT_97966 [Dictyostelium purpureum] Length = 1718 Score = 81.1 bits (199), Expect = 7e-14, Method: Composition-based stats. Identities = 33/160 (20%), Positives = 58/160 (36%), Gaps = 25/160 (15%) Query: 55 KIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQ--------------GRTLDKDPC- 99 L+ E N ++ S L +L+ + G+T K Sbjct: 1450 FFSMLKNFTE--NGEKVVAFSFSISTLNQLEYFLQKNLNWKPNIDYFRLDGQTPSKVRQR 1507 Query: 100 TIQEWNEGK--IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 I +NE + L + G NL GG ++ L W+ +Q + R Sbjct: 1508 MINRFNEEDNHLKLFIISTKAGSLGTNLT-GGTRVIILDLSWNPVHDRQAVYRC-----Y 1561 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + G K+ V+VY L+ T +E + R+ K + ++A Sbjct: 1562 RIGQKKTVYVYTLVMAGTGEERIYNRMIHKQALAKRAVDA 1601 >gi|45185972|ref|NP_983688.1| ACR286Cp [Ashbya gossypii ATCC 10895] gi|44981762|gb|AAS51512.1| ACR286Cp [Ashbya gossypii ATCC 10895] Length = 1019 Score = 81.1 bits (199), Expect = 7e-14, Method: Composition-based stats. Identities = 27/158 (17%), Positives = 57/158 (36%), Gaps = 19/158 (12%) Query: 52 HDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQK----------AFPQGRTLDKDPC 99 K+ L+ ++ A +V F L L+ ++ Sbjct: 845 ASGKVHRLQPLLRAAIARREKTLVFSLFTQVLDILELVLSSLGIAFLRLDGSTPVNDRQA 904 Query: 100 TIQEWNEG-KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQ 158 I ++ +P+ + G G+NL ++++F + +R R + Sbjct: 905 LIDRFHTDTDVPVFLLSTKAGGFGINLVCANHVIIFD------QSFNPHDDRQAADRAHR 958 Query: 159 AGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 G R V V L+++ T++E +LQ R K + + + Sbjct: 959 VGQTREVAVTTLVSRATVEEKILQLARHKLALDSSVSD 996 >gi|68011272|ref|XP_671073.1| hypothetical protein [Plasmodium berghei strain ANKA] gi|56486917|emb|CAI01503.1| hypothetical protein PB300236.00.0 [Plasmodium berghei] Length = 220 Score = 81.1 bits (199), Expect = 7e-14, Method: Composition-based stats. Identities = 37/188 (19%), Positives = 70/188 (37%), Gaps = 41/188 (21%) Query: 46 KHWKEVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQKA----------FPQGRT 93 K V+ K++ L I++ N ++V + L ++K + T Sbjct: 11 KKDNFVYSTKLRILFDHIKEDIKNELHVVVFSQWIGFLKIIEKLLTLHEIPNKIYDGSLT 70 Query: 94 LDKDPCTIQEWN--EGKI---------------------PLLFAHPASCGHGLNLQYGGN 130 ++ T+ +N +GKI +L + G GLNL + Sbjct: 71 YEQRKSTLYWFNIQKGKIYQPGIGFCQSTCDIPIENESGKVLLCSLKAGGVGLNLTVS-S 129 Query: 131 ILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 + LWW+ Q ERI + G + V +Y + + T++E +LQ ++K Sbjct: 130 KVYLMDLWWNPAIEDQAFERI-----HRIGQLKDVNIYKFVLEKTVEERILQIHQSKQYT 184 Query: 191 QDLLLNAL 198 + L + Sbjct: 185 ANQCLAQV 192 >gi|289613402|emb|CBI59655.1| unnamed protein product [Sordaria macrospora] Length = 1346 Score = 81.1 bits (199), Expect = 7e-14, Method: Composition-based stats. Identities = 36/211 (17%), Positives = 71/211 (33%), Gaps = 34/211 (16%) Query: 16 QGENIEAFNSASKTVKCLQL----ANGAVYYDE----------EKHWKEVHDEKIKALEV 61 +++ + S + +QL + VY K K+ LEV Sbjct: 779 SNGKLKSQDRGSLSNILMQLRKCLCHPFVYSQSIEDRNLSPEVSKRNLVEASSKLLLLEV 838 Query: 62 IIEKAN--AAPIIVAYHFNSDLARLQK-----AFPQGRTLDKDPCT-----IQEWNEGKI 109 ++ K +++ F L L+ P R I +N Sbjct: 839 MLPKLRERGHRVLMFSQFLDQLTILEDFLASMNLPYERLDGSHSGMEKQKRIDAFNAPDS 898 Query: 110 PLL--FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFV 167 L + G G+NL + ++ W+ + Q + R + G ++ V Sbjct: 899 KLFCMLLSTRAGGVGINL-ATADTVIILDPDWNPHQDIQALSR-----AHRIGQQKKVLC 952 Query: 168 YYLIAQNTIDELVLQRLRTKSTIQDLLLNAL 198 + L+ ++ +E +LQ R K + LL+ + Sbjct: 953 FQLMTVDSAEEKILQIGRKKMALDHLLIETM 983 >gi|221502667|gb|EEE28387.1| transcription regulatory protein SNF2, putative [Toxoplasma gondii VEG] Length = 2103 Score = 81.1 bits (199), Expect = 7e-14, Method: Composition-based stats. Identities = 27/157 (17%), Positives = 58/157 (36%), Gaps = 20/157 (12%) Query: 55 KIKALEVIIEK--ANAAPIIVAYHFNSDLARLQ---------KAFPQGRTLDKDPC---T 100 K L+V++ +++ L L+ G T ++ + Sbjct: 1575 KFAMLDVLLPALKMGNHRVLIFSQMTKLLDILEVYLSLRGHTYLRLDGGTSSEERQKRLS 1634 Query: 101 IQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 + + + + G G+NLQ + ++ F W+ + +Q +R + G Sbjct: 1635 LYNQEGSEYFIFILSTKAGGLGVNLQ-SADTVIIFDSDWNPQNDEQA-----QSRAHRIG 1688 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 K+ V I+ +I+E +LQR K L++ + Sbjct: 1689 QKKEVLTLRFISVESIEEQILQRAECKLDKDKLVIQS 1725 >gi|221485125|gb|EEE23415.1| transcription regulatory protein SNF2, putative [Toxoplasma gondii GT1] Length = 2103 Score = 81.1 bits (199), Expect = 7e-14, Method: Composition-based stats. Identities = 27/157 (17%), Positives = 58/157 (36%), Gaps = 20/157 (12%) Query: 55 KIKALEVIIEK--ANAAPIIVAYHFNSDLARLQ---------KAFPQGRTLDKDPC---T 100 K L+V++ +++ L L+ G T ++ + Sbjct: 1575 KFAMLDVLLPALKMGNHRVLIFSQMTKLLDILEVYLSLRGHTYLRLDGGTSSEERQKRLS 1634 Query: 101 IQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 + + + + G G+NLQ + ++ F W+ + +Q +R + G Sbjct: 1635 LYNQEGSEYFIFILSTKAGGLGVNLQ-SADTVIIFDSDWNPQNDEQA-----QSRAHRIG 1688 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 K+ V I+ +I+E +LQR K L++ + Sbjct: 1689 QKKEVLTLRFISVESIEEQILQRAECKLDKDKLVIQS 1725 >gi|237842499|ref|XP_002370547.1| transcription regulatory protein SNF2, putative [Toxoplasma gondii ME49] gi|211968211|gb|EEB03407.1| transcription regulatory protein SNF2, putative [Toxoplasma gondii ME49] Length = 2668 Score = 81.1 bits (199), Expect = 7e-14, Method: Composition-based stats. Identities = 27/157 (17%), Positives = 58/157 (36%), Gaps = 20/157 (12%) Query: 55 KIKALEVIIEK--ANAAPIIVAYHFNSDLARLQ---------KAFPQGRTLDKDPC---T 100 K L+V++ +++ L L+ G T ++ + Sbjct: 1575 KFAMLDVLLPALKMGNHRVLIFSQMTKLLDILEVYLSLRGHTYLRLDGGTSSEERQKRLS 1634 Query: 101 IQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 + + + + G G+NLQ + ++ F W+ + +Q +R + G Sbjct: 1635 LYNQEGSEYFIFILSTKAGGLGVNLQ-SADTVIIFDSDWNPQNDEQA-----QSRAHRIG 1688 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 K+ V I+ +I+E +LQR K L++ + Sbjct: 1689 QKKEVLTLRFISVESIEEQILQRAECKLDKDKLVIQS 1725 >gi|195122656|ref|XP_002005827.1| GI20681 [Drosophila mojavensis] gi|193910895|gb|EDW09762.1| GI20681 [Drosophila mojavensis] Length = 1457 Score = 81.1 bits (199), Expect = 7e-14, Method: Composition-based stats. Identities = 20/102 (19%), Positives = 42/102 (41%), Gaps = 7/102 (6%) Query: 96 KDPCTIQEWNEG-KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 + + E+N I L + G+NL G N ++ F W+ Q + RI Sbjct: 815 ERERLVNEFNANCNIKLFLISTRAGSLGINLT-GANRVIIFDASWNPCHDTQAVYRI--- 870 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + G + +VY ++ +++ + R K + D +++ Sbjct: 871 --YRYGQTKPCYVYRIVMDKCLEKKIYDRQIKKQGMSDRIVD 910 >gi|149184879|ref|ZP_01863196.1| SNF2 family helicase [Erythrobacter sp. SD-21] gi|148830990|gb|EDL49424.1| SNF2 family helicase [Erythrobacter sp. SD-21] Length = 556 Score = 81.1 bits (199), Expect = 7e-14, Method: Composition-based stats. Identities = 27/156 (17%), Positives = 63/156 (40%), Gaps = 23/156 (14%) Query: 51 VHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQKAFPQGRTLD------------- 95 + K++ I+E+A + +++ FN + + QGR D Sbjct: 381 LFTPKVERAIAILEEAFRSGRKVLIFAIFNR-CGEILREAAQGRLPDAYWGAINGGTPQE 439 Query: 96 KDPCTIQEWNEGKIP-LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 + + ++ P L +P + G GLN+ +++ F+ W+ Q R Sbjct: 440 ERQAIVDAFSCHDGPGCLVLNPKAAGAGLNIT-AATVVIHFTQAWNPALESQASAR---- 494 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 + G V++Y L ++T++ +++ R + + + Sbjct: 495 -AHRRGQTEPVYIYRLFYEDTVERVMIDRSQWRREL 529 >gi|25465825|pir||T51892 hypothetical protein B23I11.40 [imported] - Neurospora crassa Length = 1173 Score = 81.1 bits (199), Expect = 8e-14, Method: Composition-based stats. Identities = 30/159 (18%), Positives = 53/159 (33%), Gaps = 20/159 (12%) Query: 53 DEKIKALEVIIE-KANAAPIIVAYHFNSDLAR----LQKAFPQGRTLDKDPCTIQEWNE- 106 KI L I+ +A IV F S L L+ P + + D + E Sbjct: 938 SSKIHELIAILRREAPTHKFIVFSQFTSMLDLVEPFLRHHLPDIKHVRYDGKMSNDAREA 997 Query: 107 --------GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQ 158 + +L GLNL ++ +W+ +Q I+R+ + Sbjct: 998 SLHSLRKDPRTRILLCSLKCGSLGLNLT-AATRVIIVEPFWNPFVEEQAIDRV-----HR 1051 Query: 159 AGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 V VY L + T++ +L+ K + + Sbjct: 1052 LTQTVDVVVYKLTVRGTVEARILELQEKKRLLAQTAVEG 1090 >gi|328847835|gb|EGF97150.1| hypothetical protein MELLADRAFT_87579 [Melampsora larici-populina 98AG31] Length = 220 Score = 81.1 bits (199), Expect = 8e-14, Method: Composition-based stats. Identities = 22/110 (20%), Positives = 47/110 (42%), Gaps = 10/110 (9%) Query: 86 KAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQ 145 + PQ RTL + N I + G GLN+ + + W+ + Q Sbjct: 85 EMTPQERTL----QLNRFQNNNNIEAFIVSIEAGGVGLNMTC-ADEVYLMDAHWNPQIVQ 139 Query: 146 QMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 Q I+R+ + G V VY+++A ++++ + + K+++ ++ Sbjct: 140 QAIDRL-----HRIGQTHPVKVYHVVAGGSVEQHLFNVQKKKASLARKVI 184 >gi|298714899|emb|CBJ27655.1| similar to chromodomain helicase DNA binding protein 4 isoform 5 [Ectocarpus siliculosus] Length = 2326 Score = 81.1 bits (199), Expect = 8e-14, Method: Composition-based stats. Identities = 18/99 (18%), Positives = 42/99 (42%), Gaps = 6/99 (6%) Query: 106 EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 + I L F + G G+NL + ++ + W+ Q + R + G V Sbjct: 1181 DKDIFLFFLSTKAGGQGINL-ATADTVIIYDSDWNPHNDLQALAR-----AHRIGQANKV 1234 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIH 204 +Y +++ T++E +L+ + K ++ +++ K Sbjct: 1235 MIYRFVSRATVEERILEVAKKKLLLEHVVVQDGNKSMTQ 1273 >gi|328867660|gb|EGG16042.1| myb domain-containing protein [Dictyostelium fasciculatum] Length = 1999 Score = 81.1 bits (199), Expect = 8e-14, Method: Composition-based stats. Identities = 24/146 (16%), Positives = 52/146 (35%), Gaps = 18/146 (12%) Query: 65 KANAAPIIVAYHFNSDLARLQKAF---------PQGRTLDKDPCT-IQEWNEG--KIPLL 112 +A +++ L L G D I +++ + Sbjct: 800 RAGGHKVLIFSQMVMVLDILDDYLTYRGYPHERIDGSIKGNDRQAAIDRFSKKGSDSFVF 859 Query: 113 FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIA 172 + G G+NL + ++ F W+ + Q R + G + V VY L+ Sbjct: 860 LLCTKAGGIGINLT-AADTVIIFDSDWNPQNDLQAQARC-----HRIGQDKMVKVYRLVT 913 Query: 173 QNTIDELVLQRLRTKSTIQDLLLNAL 198 +NT ++++ R K ++ ++L + Sbjct: 914 RNTYEKIMFDRASKKLSLDKVVLTKM 939 >gi|193084404|gb|ACF10057.1| SNF2-related protein [uncultured marine crenarchaeote SAT1000-21-C11] Length = 569 Score = 81.1 bits (199), Expect = 8e-14, Method: Composition-based stats. Identities = 44/201 (21%), Positives = 76/201 (37%), Gaps = 20/201 (9%) Query: 4 YHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVII 63 Y +++ L+ E A SK + A+ + + I ++ I+ Sbjct: 355 YKNELNKIWSKLEEEQKSAETEFSKVASYQR----AIQSERQAAGVAKLHHVIDFVKNIM 410 Query: 64 EKANAAPIIVAYHFNSDLARLQKAFPQ--------GRTLDKDPCTIQEWNEGKIPLLFAH 115 E ++V H S L ++ + G+T I + G L+ Sbjct: 411 EIEE--SVVVFCHHKSIHKLLHESLQEFNPAAIIGGQTDKVRQENIDNFQNGGTKLIVVG 468 Query: 116 PASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNT 175 + G+NL ++F L W H+Q +R+ + G K VF YYLI + T Sbjct: 469 LRAGNLGINLTR-AKYVIFAELDWSPAIHRQAEDRL-----HRIGQKNTVFAYYLIGKRT 522 Query: 176 IDELVLQRLRTKSTIQDLLLN 196 +DE V L KS D +++ Sbjct: 523 LDEHVANILVDKSYEIDAIMD 543 >gi|14140291|gb|AAK54297.1|AC034258_15 putative helicase [Oryza sativa Japonica Group] Length = 1492 Score = 81.1 bits (199), Expect = 8e-14, Method: Composition-based stats. Identities = 30/181 (16%), Positives = 67/181 (37%), Gaps = 33/181 (18%) Query: 43 DEEKHWKEVHDEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQ-------------KA 87 DE + + + K+ L I+ + +V S L ++ K Sbjct: 1121 DENAYKEADYSGKMVLLLDILSSCSELGDKALVFSQSLSTLDLVEFYLSKLQVNGKEGKY 1180 Query: 88 FPQGRTLDK---------DPCTIQEWNEGK---IPLLFAHPASCGHGLNLQYGGNILVFF 135 + QG+ + ++ +N+ + + + G+NL + N ++ Sbjct: 1181 WKQGKDWYRIDGSTPSSERQNLVERFNDPENIRVKCTLISTRAGSLGINL-HSANRVILL 1239 Query: 136 SLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 W+ Q I R+ + G + V+ Y L+A T++E + +R TK + ++ Sbjct: 1240 DGSWNPTHDLQAIYRVW-----RYGQTKPVYAYRLMAHATMEEKIYKRQVTKEGLAARVV 1294 Query: 196 N 196 + Sbjct: 1295 D 1295 >gi|330845465|ref|XP_003294605.1| hypothetical protein DICPUDRAFT_4822 [Dictyostelium purpureum] gi|325074901|gb|EGC28868.1| hypothetical protein DICPUDRAFT_4822 [Dictyostelium purpureum] Length = 1004 Score = 81.1 bits (199), Expect = 8e-14, Method: Composition-based stats. Identities = 21/141 (14%), Positives = 53/141 (37%), Gaps = 18/141 (12%) Query: 68 AAPIIVAYHFNSDLARL---------QKAFPQGRTLD-KDPCTIQEWNEG--KIPLLFAH 115 + +++ L L + A G T +I +N+ ++ Sbjct: 479 GSRVLIFSQMARMLDILEDYMLYRNYRYARIDGSTDSVSRENSIDNFNKPGSELFAFLLT 538 Query: 116 PASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNT 175 + G G+ L ++++ F W+ + Q R + G + V VY + + + Sbjct: 539 TRAGGLGITL-NTADVVILFDSDWNPQMDLQA-----QDRAHRIGQTKPVTVYRFVTEAS 592 Query: 176 IDELVLQRLRTKSTIQDLLLN 196 ++E ++++ K + L++ Sbjct: 593 MEEKMVEKAEMKLQLDALVIQ 613 >gi|168050295|ref|XP_001777595.1| SNF2 family DNA-dependent ATPase [Physcomitrella patens subsp. patens] gi|162671080|gb|EDQ57638.1| SNF2 family DNA-dependent ATPase [Physcomitrella patens subsp. patens] Length = 775 Score = 81.1 bits (199), Expect = 8e-14, Method: Composition-based stats. Identities = 23/151 (15%), Positives = 55/151 (36%), Gaps = 21/151 (13%) Query: 52 HDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQKAF------------PQGRTLDKD 97 K+ L ++ +++ L L++ + + Sbjct: 540 ASAKLTLLHSMLRHLKRGGHRVLIFSQMTKLLDILEEYMVFEFGAHSYERVDGSVPVAER 599 Query: 98 PCTIQEWNEGKIP-LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 +I +N+ + + SCG G+NL + ++ + ++ Q + R Sbjct: 600 QKSISRFNQDQSRFVFLLSTRSCGLGINL-ATADTVIIYDSDFNPHADIQAMNR-----A 653 Query: 157 RQAGFKRAVFVYYLIAQNTIDELVLQRLRTK 187 + G + + VY L+ + +++E +LQ R K Sbjct: 654 HRIGQSKTLLVYRLVVRASVEERILQLARKK 684 >gi|303283790|ref|XP_003061186.1| SNF2 super family [Micromonas pusilla CCMP1545] gi|226457537|gb|EEH54836.1| SNF2 super family [Micromonas pusilla CCMP1545] Length = 962 Score = 81.1 bits (199), Expect = 8e-14, Method: Composition-based stats. Identities = 30/222 (13%), Positives = 74/222 (33%), Gaps = 39/222 (17%) Query: 6 KFQRELYCDLQGENIEAFNSASKTVKCLQLA-----------------NGAVYYDEEKHW 48 Q++ Y ++IE N + L + G Y+ E Sbjct: 340 DMQKDYYKKALQKDIEVVNRGGDRSRLLNMVMQLRKCCNHPYLFQGAEPGPPYFTGEHII 399 Query: 49 KEVHDEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQKAFPQGRTL----------DK 96 + + K+ L+ ++ + + +++ L L+ + + Sbjct: 400 E--NSGKMVLLDKLLTRLKEKGSRVLIFSQMTRLLDILEDYMIYRQHKYCRIDGNTSGED 457 Query: 97 DPCTIQEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 I +N + + G G+NL + ++ + W+ + Q ++R Sbjct: 458 RENAIDGYNAPGSEKFAFLLSTRAGGLGINL-VTADTVIIYDSDWNPQMDLQAMDR---- 512 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + G R V V+ +++E V+++ K + L++ Sbjct: 513 -AHRIGQTREVSVFRFCTDMSVEEKVIEKAYKKLALDALVIQ 553 >gi|94268376|ref|ZP_01291158.1| SNF2-related:Helicase-like:SWIM Zn-finger:DEAD/DEAH box helicase-like [delta proteobacterium MLMS-1] gi|93451632|gb|EAT02425.1| SNF2-related:Helicase-like:SWIM Zn-finger:DEAD/DEAH box helicase-like [delta proteobacterium MLMS-1] Length = 1022 Score = 81.1 bits (199), Expect = 8e-14, Method: Composition-based stats. Identities = 35/174 (20%), Positives = 68/174 (39%), Gaps = 22/174 (12%) Query: 35 LANGAVYYDEEKHWKEVHDEKIKALEVIIEK---ANAAPIIVAYHFNSD----LARLQK- 86 +A A ++ + V KI L I+++ + +V + RL++ Sbjct: 590 MACDAAGLVDK---ESVGSPKIDELAQILDEVCLQSGLKAVVFSQWELMTRMVEQRLRRL 646 Query: 87 -----AFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDL 141 G K ++ + L+F + G GLNLQ ++LV + W+ Sbjct: 647 GIGYVRLHGGVPTAKRGELLERFRSDDSVLVFLSTDAGGVGLNLQ-SASVLVNLDVPWNP 705 Query: 142 EEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 +Q RI + G V + ++A N+ +E VL ++ K + D ++ Sbjct: 706 AVLEQRNGRI-----HRLGQPNKVQIITMVAANSYEEQVLSLVQNKQALFDQVI 754 >gi|83769647|dbj|BAE59782.1| unnamed protein product [Aspergillus oryzae] Length = 1100 Score = 81.1 bits (199), Expect = 8e-14, Method: Composition-based stats. Identities = 35/178 (19%), Positives = 68/178 (38%), Gaps = 28/178 (15%) Query: 50 EVHDEKIKALE----VIIEKANA----API--IVAYHFNSDLARLQKAFPQGR------- 92 E K KAL ++++ PI +V + S L ++ A Sbjct: 916 EGPHTKTKALIAYLLETMDESKGLTDERPIKSVVFSAWTSHLDLIEIALKDNGITGFTRL 975 Query: 93 ----TLDKDPCTIQEW-NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQM 147 TL +QE+ + I +L A + G GLNL + + ++ Q Sbjct: 976 DGTMTLSARQKALQEFHDNNDITILLATIGAGGVGLNLTSASRVYIM-EPQYNPAAVAQA 1034 Query: 148 IERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIHV 205 ++R+ + G R V + +++I+E + + + K + D+ +N K + V Sbjct: 1035 VDRV-----HRIGQTREVTTVQFLMKDSIEEKIFELAKKKQQLADMSMNQRKLDKREV 1087 >gi|307197292|gb|EFN78584.1| Chromodomain-helicase-DNA-binding protein 7 [Harpegnathos saltator] Length = 4395 Score = 81.1 bits (199), Expect = 9e-14, Method: Composition-based stats. Identities = 19/124 (15%), Positives = 44/124 (35%), Gaps = 12/124 (9%) Query: 75 YHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVF 134 Y + R++ Q + + + G G+NL + ++ Sbjct: 2130 YPYERIDGRIRGNLRQAAIDRYSKPDSDRF------VFLLCTKAGGLGINLT-AADTVII 2182 Query: 135 FSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 + W+ + Q R + G ++ V VY L+ +NT + + + K + + Sbjct: 2183 YDSDWNPQNDLQAQARC-----HRIGQQKMVKVYRLLCRNTYEREMFDKASLKLGLDKAI 2237 Query: 195 LNAL 198 L ++ Sbjct: 2238 LQSM 2241 >gi|1658307|emb|CAA86572.1| helicase-like transcription factor [Homo sapiens] Length = 887 Score = 81.1 bits (199), Expect = 9e-14, Method: Composition-based stats. Identities = 27/163 (16%), Positives = 56/163 (34%), Gaps = 19/163 (11%) Query: 42 YDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQ----------KAFPQG 91 D E + + AL + +K +V F + L+ ++ Sbjct: 703 SDMEWTSSSKINALMHALTDLRKKNPNIKSLVVSQFTTFLSLIEIPLKASGFVFTRLDGS 762 Query: 92 RTLDKDPCTIQEWNE---GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMI 148 K +IQ + G ++ + G GLNL + + W+ Q Sbjct: 763 MAQKKRVESIQCFQNTEAGSPTIMLLSLRAGGVGLNL-SAASRVFLMDPAWNPAAEDQCF 821 Query: 149 ERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQ 191 +R + G K+ V + I +++++E +L+ K + Sbjct: 822 DRC-----HRLGQKQEVIITKFIVKDSVEENMLKIQNKKRELA 859 >gi|145522063|ref|XP_001446881.1| hypothetical protein [Paramecium tetraurelia strain d4-2] gi|124414370|emb|CAK79484.1| unnamed protein product [Paramecium tetraurelia] Length = 987 Score = 81.1 bits (199), Expect = 9e-14, Method: Composition-based stats. Identities = 22/138 (15%), Positives = 53/138 (38%), Gaps = 18/138 (13%) Query: 71 IIVAYHFNSDLARLQK----------AFPQGRTLDKDPCTIQEWNEGKIP--LLFAHPAS 118 +++ F L L+ + + I E+ + + + Sbjct: 454 VLIFSQFTMMLNILEDYCNYRKYDYCRIDGETEIQQRDDQIAEFTKPDSKKFIFLLSTRA 513 Query: 119 CGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDE 178 G G+NL + ++ + ++ + Q ++R + G K V VY + ++TI+E Sbjct: 514 GGLGINL-ATADTVIIYDSDFNPQMDMQAMDR-----AHRIGQKNRVMVYRMACEHTIEE 567 Query: 179 LVLQRLRTKSTIQDLLLN 196 +++R + K L++ Sbjct: 568 KIIERQQIKLRWDSLMIQ 585 >gi|299531068|ref|ZP_07044481.1| helicase domain-containing protein [Comamonas testosteroni S44] gi|298721025|gb|EFI61969.1| helicase domain-containing protein [Comamonas testosteroni S44] Length = 616 Score = 81.1 bits (199), Expect = 9e-14, Method: Composition-based stats. Identities = 35/152 (23%), Positives = 57/152 (37%), Gaps = 17/152 (11%) Query: 60 EVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRT----------LDKDPCTIQEWN-EGK 108 E + +I+ + S + L++A L + + + + Sbjct: 444 ETVQAMGEDDKLIIFCEYMSTVEALKQALASLGVGCVSLVGSDSLKRRQAAVDAFQRDAS 503 Query: 109 IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVY 168 I + + G G+ L NI+ F S+ W +Q +R + G R V V Sbjct: 504 IKVFIGTTMAAGVGITLT-AANIVAFASMPWTPALMRQAEDR-----AYRLGQIRDVLVL 557 Query: 169 YLIAQNTIDELVLQRLRTKSTIQDLLLNALKK 200 I Q TIDE VLQ K T + ++ A KK Sbjct: 558 VPIIQGTIDEGVLQLQENKHTTEIEVVEAAKK 589 >gi|308068514|ref|YP_003870119.1| Hypothetical helicase [Paenibacillus polymyxa E681] gi|305857793|gb|ADM69581.1| Hypothetical helicase [Paenibacillus polymyxa E681] Length = 604 Score = 81.1 bits (199), Expect = 9e-14, Method: Composition-based stats. Identities = 31/156 (19%), Positives = 66/156 (42%), Gaps = 17/156 (10%) Query: 52 HDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAF--------PQGRTLDKDPCT-IQ 102 + K + +I + N +I+ + + L F P +++ + Sbjct: 375 ANSKAEKALELIRQMNEK-VIIFTEYRATQEYLLNYFRDRGLSAVPYRGGMNRGRKDWMM 433 Query: 103 EWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFK 162 + G+I ++ A + G G+NLQ+ + ++ F L W+ +Q I R+ + G Sbjct: 434 DLFRGRIQVMIA-TEAGGEGINLQF-CHHMINFDLPWNPMRVEQRIGRV-----HRLGQT 486 Query: 163 RAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNAL 198 V ++ L TI+E +L L K + ++++ L Sbjct: 487 HDVNIFNLSTTGTIEEHILHLLHEKINMFEMVIGGL 522 >gi|313238451|emb|CBY13525.1| unnamed protein product [Oikopleura dioica] Length = 590 Score = 81.1 bits (199), Expect = 9e-14, Method: Composition-based stats. Identities = 27/143 (18%), Positives = 55/143 (38%), Gaps = 19/143 (13%) Query: 59 LEVIIEKANAAPIIVAYHFNSDLARLQKAFP-----------QGRTLDKDPCTIQEWNEG 107 LE ++ A +A I++ + L ++K + +++ + + Sbjct: 412 LEELL--AESAKILIFSNSKKILTIIEKLLSGKNIKYDRIDGTIQPKERNNKVHRFQTDS 469 Query: 108 KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFV 167 I + GL L ++ F +W+ + Q ++R + G K AV V Sbjct: 470 TIKVCLLTTGVGAVGLTLT-AATRVIVFDPYWNPSKDDQAVDR-----AYRIGQKNAVVV 523 Query: 168 YYLIAQNTIDELVLQRLRTKSTI 190 + LI TI+E + + K +I Sbjct: 524 FRLITCETIEEKIYSKQLFKKSI 546 >gi|195389136|ref|XP_002053233.1| GJ23773 [Drosophila virilis] gi|194151319|gb|EDW66753.1| GJ23773 [Drosophila virilis] Length = 1952 Score = 81.1 bits (199), Expect = 9e-14, Method: Composition-based stats. Identities = 40/193 (20%), Positives = 75/193 (38%), Gaps = 34/193 (17%) Query: 28 KTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVII---------EKANAAPIIVAYHFN 78 T QLA D+ +H K+ AL+ ++ E + ++ Sbjct: 1698 LTNVAAQLALSNSTLDDIEH-----SAKLPALKQLLLDCGIGVQTESVSQHRALIFCQLK 1752 Query: 79 SDLAR-----LQKAFPQGRTLDKDPCT--------IQEWN-EGKIPLLFAHPASCGHGLN 124 + L L+K P L D + +N + I +L G GLN Sbjct: 1753 AMLDIVEHDLLRKHLPSVTYLRLDGSVPASLRQDIVNNFNSDPSIDVLLLTTLVGGLGLN 1812 Query: 125 LQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRL 184 L G + ++F W+ + Q ++R + G K+ V VY LI +N+++E ++ Sbjct: 1813 LT-GADTVIFVEHDWNPMKDLQAMDR-----AHRIGQKKVVNVYRLITRNSLEEKIMSLQ 1866 Query: 185 RTKSTIQDLLLNA 197 + K + +++A Sbjct: 1867 KFKILTANTVVSA 1879 >gi|302812321|ref|XP_002987848.1| hypothetical protein SELMODRAFT_426581 [Selaginella moellendorffii] gi|300144467|gb|EFJ11151.1| hypothetical protein SELMODRAFT_426581 [Selaginella moellendorffii] Length = 437 Score = 81.1 bits (199), Expect = 9e-14, Method: Composition-based stats. Identities = 25/130 (19%), Positives = 48/130 (36%), Gaps = 13/130 (10%) Query: 68 AAPIIVAYHFNSDLARLQKAFPQGRTLD------KDPCTIQEWN-EGKIPLLFAHPASCG 120 + A D R + Q +D K I +N + ++ +L + G Sbjct: 288 KKLQLEAQEKQHDFERGVQEIGQSAKIDGSMNMTKREAEISRFNRDPEVMVLLLSLRAAG 347 Query: 121 HGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELV 180 GLNL + ++ +WW+ Q I+R + R V V + + +++E + Sbjct: 348 CGLNL-VAASCVLLIDMWWNPTTEDQAIDR-----AHRIVQTRPVHVTKFMVKESVEEQI 401 Query: 181 LQRLRTKSTI 190 L K + Sbjct: 402 LAIQEKKKKM 411 >gi|114666515|ref|XP_512012.2| PREDICTED: chromodomain helicase DNA binding protein 3 [Pan troglodytes] Length = 1846 Score = 81.1 bits (199), Expect = 9e-14, Method: Composition-based stats. Identities = 24/160 (15%), Positives = 52/160 (32%), Gaps = 20/160 (12%) Query: 45 EKHWKEVHDEKIKALEVIIEKA--NAAPIIVA----------YHFNSDLARLQKAFPQGR 92 E K+ L+ ++ K +++ Y+F + G Sbjct: 1046 EGGALIKSSGKLMLLQKMLRKLKEQGHRVLIFSQVTCALSCLYNFLDYEGYKYERIDGGI 1105 Query: 93 TLDKDPCTIQEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 T I +N + + G G+NL + ++ F W+ Q Sbjct: 1106 TGALRQEAIDRFNAPGAQQFCFLLSTRAGGLGINL-ATADTVIIFDSDWNPHNDIQA--- 1161 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 +R + G V +Y + + +++E + Q + K + Sbjct: 1162 --FSRAHRIGQANKVMIYRFVTRASVEERITQVAKRKMML 1199 >gi|299469770|emb|CBN76624.1| Essential abundant protein involved in regulation of transcription [Ectocarpus siliculosus] Length = 2331 Score = 80.8 bits (198), Expect = 9e-14, Method: Composition-based stats. Identities = 27/143 (18%), Positives = 58/143 (40%), Gaps = 20/143 (13%) Query: 68 AAPIIVAYHFNSDLA-----RLQKAFPQGRTLD--------KDPCTIQEWN-EGKIPLLF 113 +V + L L+ FP + L + + ++ + + +L Sbjct: 2128 GRKCLVFAQHKAALDVTESALLRPCFPGVKYLRMDGSVSQAERAAAVDRFSADPSVAILL 2187 Query: 114 AHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQ 173 GLNL +++VF W+ + Q ++R + G ++AV VY LIA Sbjct: 2188 LTTRVGHLGLNL-SAASMVVFLEHDWNPQVDLQAMDR-----AHRLGQRKAVNVYRLIAA 2241 Query: 174 NTIDELVLQRLRTKSTIQDLLLN 196 +++++ VL+ K + +++ Sbjct: 2242 DSVEQRVLRLQGHKLQVAAAVVS 2264 >gi|332022432|gb|EGI62740.1| Chromodomain-helicase-DNA-binding protein 7 [Acromyrmex echinatior] Length = 4236 Score = 80.8 bits (198), Expect = 9e-14, Method: Composition-based stats. Identities = 19/124 (15%), Positives = 44/124 (35%), Gaps = 12/124 (9%) Query: 75 YHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVF 134 Y + R++ Q + + + G G+NL + ++ Sbjct: 2083 YPYERIDGRIRGNLRQAAIDRYSKPDSDRF------VFLLCTKAGGLGINLT-AADTVII 2135 Query: 135 FSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 + W+ + Q R + G ++ V VY L+ +NT + + + K + + Sbjct: 2136 YDSDWNPQNDLQAQARC-----HRIGQQKMVKVYRLLCRNTYEREMFDKASLKLGLDKAI 2190 Query: 195 LNAL 198 L ++ Sbjct: 2191 LQSM 2194 >gi|38014266|gb|AAH01474.2| RAD54L2 protein [Homo sapiens] Length = 1159 Score = 80.8 bits (198), Expect = 9e-14, Method: Composition-based stats. Identities = 35/180 (19%), Positives = 67/180 (37%), Gaps = 39/180 (21%) Query: 52 HDEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQKAFPQGRT---------------- 93 + K+ L +IE++ I+V S LA +++ + Sbjct: 411 NSPKMVLLFHLIEESVKLGDKILVFSQSLSTLALIEEFLGKREVPCPPGTEGQGAQKWVR 470 Query: 94 ------LD------KDPCTIQEWNEGKIP---LLFAHPASCGHGLNLQYGGNILVFFSLW 138 LD + I ++N+ L + G+NL G N +V F Sbjct: 471 NISYFRLDGSTPAFERERLINQFNDPSNLTTWLFLLSTRAGCLGVNL-IGANRVVVFDAS 529 Query: 139 WDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNAL 198 W+ Q + R + G K+ F+Y L+A T+++ + R +K + D +++ L Sbjct: 530 WNPCHDAQAV-----CRVYRYGQKKPCFIYRLVADYTLEKKIYDRQISKQGMSDRVVDDL 584 >gi|145491211|ref|XP_001431605.1| hypothetical protein [Paramecium tetraurelia strain d4-2] gi|124398710|emb|CAK64207.1| unnamed protein product [Paramecium tetraurelia] Length = 654 Score = 80.8 bits (198), Expect = 9e-14, Method: Composition-based stats. Identities = 23/147 (15%), Positives = 53/147 (36%), Gaps = 23/147 (15%) Query: 53 DEKIKALEVIIEKANAAPIIVAYHFNSDLARLQK----------AFPQGRTLDKDPCTIQ 102 D+ ++ L I++ F L L+ + I Sbjct: 453 DKFLQKLSE-----GQHQILIFSQFTMMLNILEDYCNFRGYEYCRIDGETEIQSRDDQIA 507 Query: 103 EWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 E+ + + G G+NL + ++ + ++ + Q ++R + G Sbjct: 508 EFTAPDSKKFIFLLSTRAGGLGINL-ATADTVIIYDSDFNPQMDMQAMDR-----AHRIG 561 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTK 187 K V VY + ++T++E +++R + K Sbjct: 562 QKSRVMVYRMACEHTVEEKIIERQQIK 588 >gi|302753908|ref|XP_002960378.1| hypothetical protein SELMODRAFT_73550 [Selaginella moellendorffii] gi|300171317|gb|EFJ37917.1| hypothetical protein SELMODRAFT_73550 [Selaginella moellendorffii] Length = 159 Score = 80.8 bits (198), Expect = 1e-13, Method: Composition-based stats. Identities = 23/139 (16%), Positives = 49/139 (35%), Gaps = 20/139 (14%) Query: 68 AAPIIVAYHFNSDLARLQKAFPQGRT----------LDKDPCTIQEW-NEGKIPLLFAHP 116 ++ + S L ++ K I+ + + + ++ Sbjct: 5 GEKSLIFSQWTSMLNLIEPELEGAGIQFSRIDGSMSAGKRVAAIKRFSEDPDVVVMLISL 64 Query: 117 ASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTI 176 + GLNL ++L+ +WW+ Q I+R + G R V V + + T+ Sbjct: 65 RA---GLNLVAASHVLLM-DMWWNPTTEDQAIDR-----THRIGQTRPVHVTRFVVKQTV 115 Query: 177 DELVLQRLRTKSTIQDLLL 195 E VL+ K + + + Sbjct: 116 QEHVLEIQEKKKKLVEFVF 134 >gi|15228256|ref|NP_188282.1| SNF2 domain-containing protein / helicase domain-containing protein / RING finger domain-containing protein [Arabidopsis thaliana] Length = 638 Score = 80.8 bits (198), Expect = 1e-13, Method: Composition-based stats. Identities = 21/85 (24%), Positives = 36/85 (42%), Gaps = 6/85 (7%) Query: 106 EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 G + + + GLN+ + ++ LWW+ Q I+R + G RAV Sbjct: 504 SGLVCAMLMSLKAGNLGLNM-VAASHVILLDLWWNPTTEDQAIDR-----AHRIGQTRAV 557 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTI 190 V + +NT++E +L K I Sbjct: 558 TVTRIAIKNTVEERILTLHERKRNI 582 >gi|255953435|ref|XP_002567470.1| Pc21g04240 [Penicillium chrysogenum Wisconsin 54-1255] gi|211589181|emb|CAP95321.1| Pc21g04240 [Penicillium chrysogenum Wisconsin 54-1255] Length = 1220 Score = 80.8 bits (198), Expect = 1e-13, Method: Composition-based stats. Identities = 21/84 (25%), Positives = 35/84 (41%), Gaps = 6/84 (7%) Query: 111 LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYL 170 +L + G GLNL N+ + WW Q I+R+ + G R V V Sbjct: 1117 VLLISLRAGGVGLNLTSASNVFIM-DPWWSFAIEAQAIDRV-----HRMGQTRDVNVTRF 1170 Query: 171 IAQNTIDELVLQRLRTKSTIQDLL 194 + +++I+ +L+ K I L Sbjct: 1171 VVKDSIEGRMLRVQERKMNIAGSL 1194 >gi|114589754|ref|XP_516811.2| PREDICTED: SWI/SNF-related matrix-associated actin-dependent regulator of chromatin a3 isoform 6 [Pan troglodytes] Length = 1008 Score = 80.8 bits (198), Expect = 1e-13, Method: Composition-based stats. Identities = 27/163 (16%), Positives = 56/163 (34%), Gaps = 19/163 (11%) Query: 42 YDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQ----------KAFPQG 91 D E + + AL + +K +V F + L+ ++ Sbjct: 824 SDMEWTSSSKINALMHALTDLRKKNPNIKSLVVSQFTTFLSLVEIPLKASGFVFTRLDGS 883 Query: 92 RTLDKDPCTIQEWNE---GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMI 148 K +IQ + G ++ + G GLNL + + W+ Q Sbjct: 884 MAQKKRVESIQCFQNTEAGSPTIMLLSLKAGGVGLNL-SAASRVFLMDPAWNPAAEDQCF 942 Query: 149 ERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQ 191 +R + G K+ V + I +++++E +L+ K + Sbjct: 943 DRC-----HRLGQKQEVIITKFIVKDSVEENMLKIQNKKRELA 980 >gi|326912863|ref|XP_003202765.1| PREDICTED: chromodomain-helicase-DNA-binding protein 1-like [Meleagris gallopavo] Length = 861 Score = 80.8 bits (198), Expect = 1e-13, Method: Composition-based stats. Identities = 31/185 (16%), Positives = 71/185 (38%), Gaps = 27/185 (14%) Query: 14 DLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIV 73 ++ IEA K L +Y + H + + K L+++ + + Sbjct: 306 EIGDHIIEASGKLCLLDKLL----SFLY--DGGHRVLLFSQMTKLLDILQDYMDYRG--- 356 Query: 74 AYHFNSDLARLQKAFPQGRTLDKDPC-TIQEWNEGKIPLLFAHPASCGHGLNLQYGGNIL 132 Y + RL G ++ I+ + + I + G G+NL + + Sbjct: 357 -YSY----ERL-----DGSVRGEERHLAIKNFGQQPIFVFLLSTR-AGVGMNLT-AADTV 404 Query: 133 VFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQD 192 +F ++ + Q I R + G + V + LI ++T++E++ +R +K + + Sbjct: 405 IFTDSDFNPQNDLQAIAR-----AHRIGQHKPVKIIRLIGRDTVEEIIYRRAASKLRLTN 459 Query: 193 LLLNA 197 ++ Sbjct: 460 AIVEG 464 >gi|321478915|gb|EFX89871.1| DNA excision repair protein ERCC-6-like protein [Daphnia pulex] Length = 1584 Score = 80.8 bits (198), Expect = 1e-13, Method: Composition-based stats. Identities = 27/162 (16%), Positives = 56/162 (34%), Gaps = 26/162 (16%) Query: 53 DEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQ---------KAFPQGRT-LDKDPCT 100 K+ +E +++ K +++ L L+ G T + Sbjct: 1033 SGKLLVVESLLKIWKEQNHRVLLFSQSRQMLDILECFIRQQSYNYLRLDGTTSIGSRQPM 1092 Query: 101 IQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQA 159 I+++N I + G N ++ + W+ Q ER + Sbjct: 1093 IEKYNKSADIFVFLLTTRVGG--------ANRVIIYDPDWNPSTDTQARERAW-----RI 1139 Query: 160 GFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 G ++ V +Y L+ TI+E + R K + + +L K+ Sbjct: 1140 GQQKDVTIYRLLTSGTIEEKIYHRQIFKQYLTNRVLKDPKQR 1181 >gi|320588829|gb|EFX01297.1| DNA excision repair protein [Grosmannia clavigera kw1407] Length = 1166 Score = 80.8 bits (198), Expect = 1e-13, Method: Composition-based stats. Identities = 27/136 (19%), Positives = 48/136 (35%), Gaps = 17/136 (12%) Query: 68 AAPIIVAYHFNSDLARLQKAF----------PQGRTLDKDPCTIQEWN-EGKIPLLFAHP 116 ++V H L LQ F + ++ + ++N + + Sbjct: 648 GDKVLVFSHTVRLLQMLQHLFHSTSYSVSYLDGSLSYEERQRVVDDFNTDPAQFVFLIST 707 Query: 117 ASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTI 176 + G GLN+ N +V W+ Q R + G R V V+ L++ TI Sbjct: 708 RAGGVGLNIT-SANKVVIVDPHWNPAYDLQA-----QDRAYRIGQVRDVDVFRLVSAGTI 761 Query: 177 DELVLQRLRTKSTIQD 192 +E+V R K + Sbjct: 762 EEIVYARQIYKQQQAN 777 >gi|270013006|gb|EFA09454.1| hypothetical protein TcasGA2_TC010670 [Tribolium castaneum] Length = 1618 Score = 80.8 bits (198), Expect = 1e-13, Method: Composition-based stats. Identities = 30/169 (17%), Positives = 60/169 (35%), Gaps = 30/169 (17%) Query: 52 HDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQK---------------------AF 88 + K++ L II + A ++V L +++ Sbjct: 912 NSAKMEILFCIIRESIALGDRLLVFSQSLITLDLIEQFLQMNVVPGDTQKWCRNTNYYRL 971 Query: 89 PQGRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQM 147 + + I E+N KI + + G+NL G N +V W+ Q Sbjct: 972 DGSTSALEREKLINEFNSNPKIHVFLVSTRAGSLGINL-IGANRVVVLDASWNPCHDTQA 1030 Query: 148 IERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + R + G ++ FVY L+ N +++ + R K + D +++ Sbjct: 1031 V-----CRVYRYGQRKPCFVYRLVVDNCLEKKIYDRQINKQGMSDRVVD 1074 >gi|114589744|ref|XP_001138277.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent regulator of chromatin a3 isoform 1 [Pan troglodytes] gi|114589746|ref|XP_001138954.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent regulator of chromatin a3 isoform 5 [Pan troglodytes] gi|114589748|ref|XP_001138604.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent regulator of chromatin a3 isoform 2 [Pan troglodytes] gi|114589750|ref|XP_001138690.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent regulator of chromatin a3 isoform 3 [Pan troglodytes] gi|114589752|ref|XP_001138877.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent regulator of chromatin a3 isoform 4 [Pan troglodytes] Length = 1009 Score = 80.8 bits (198), Expect = 1e-13, Method: Composition-based stats. Identities = 27/163 (16%), Positives = 56/163 (34%), Gaps = 19/163 (11%) Query: 42 YDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQ----------KAFPQG 91 D E + + AL + +K +V F + L+ ++ Sbjct: 825 SDMEWTSSSKINALMHALTDLRKKNPNIKSLVVSQFTTFLSLVEIPLKASGFVFTRLDGS 884 Query: 92 RTLDKDPCTIQEWNE---GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMI 148 K +IQ + G ++ + G GLNL + + W+ Q Sbjct: 885 MAQKKRVESIQCFQNTEAGSPTIMLLSLKAGGVGLNL-SAASRVFLMDPAWNPAAEDQCF 943 Query: 149 ERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQ 191 +R + G K+ V + I +++++E +L+ K + Sbjct: 944 DRC-----HRLGQKQEVIITKFIVKDSVEENMLKIQNKKRELA 981 >gi|45357049|gb|AAS58478.1| SNF2P [Hordeum vulgare subsp. vulgare] Length = 882 Score = 80.8 bits (198), Expect = 1e-13, Method: Composition-based stats. Identities = 33/175 (18%), Positives = 67/175 (38%), Gaps = 32/175 (18%) Query: 42 YDEEKHWKEVHDEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQ-------------- 85 Y+E +H + K+ L++++EK + +++ L LQ Sbjct: 354 YEEGEHLVQ-ASGKLIVLDLVLEKLHRLGHRVVLFAQMTQTLDILQDFLELRNYTYERLD 412 Query: 86 ------KAFPQGRTLDKDPC---TIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFS 136 + F R P + N + + G GLNL G + ++F+ Sbjct: 413 GSVRAEERFAAIRNFSSQPTKGVVRDDNNPSGAFIFMISTRAGGVGLNL-IGADTVIFYE 471 Query: 137 LWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQ 191 W+ + +Q ++R + G V L++Q TI+E++++R K + Sbjct: 472 QDWNPQADKQALQR-----THRIGQLNHVLSINLVSQRTIEEVIMRRAERKLKLS 521 >gi|327303684|ref|XP_003236534.1| SNF2 family helicase/ATPase [Trichophyton rubrum CBS 118892] gi|326461876|gb|EGD87329.1| SNF2 family helicase/ATPase [Trichophyton rubrum CBS 118892] Length = 1167 Score = 80.8 bits (198), Expect = 1e-13, Method: Composition-based stats. Identities = 29/171 (16%), Positives = 65/171 (38%), Gaps = 20/171 (11%) Query: 40 VYYDEEKHWKEVHDEKIKALEVIIEKANAAPI--IVAYHFNSDLARLQKAFPQGRT---- 93 +Y K + + E + + PI ++ + S L ++ A + Sbjct: 982 LYEGPHTKTKALISHLLDTAEDNKKSSRQPPIKSVIFSAWTSHLDLIEIALEENGLTGYT 1041 Query: 94 -------LDKDPCTIQEW-NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQ 145 L + +I+ + + + +L + G GLNL G+++ ++ Sbjct: 1042 RLDGTMSLKQRNASIETFSTDDNVTILLVTIGAGGVGLNLT-AGSMVYIMEPQYNPAAIA 1100 Query: 146 QMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 Q ++R+ + G R V I ++I+E + + + K + D+ LN Sbjct: 1101 QAVDRV-----HRIGQTREVTTIQFIMNDSIEEKITELAKRKQKLADMSLN 1146 >gi|330982918|gb|EGH81021.1| SNF2-related:helicase [Pseudomonas syringae pv. aptata str. DSM 50252] Length = 281 Score = 80.8 bits (198), Expect = 1e-13, Method: Composition-based stats. Identities = 26/111 (23%), Positives = 46/111 (41%), Gaps = 14/111 (12%) Query: 29 TVKCLQLANGA--VYYDEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARL 84 +K Q+ V D + K+ K+ +L + E+ A I++ F S L+ + Sbjct: 172 LLKLRQVCCDLRLVNQDMPVNSKQGTSGKLNSLMEMFEELLAEGRKILLFSQFTSMLSLI 231 Query: 85 QKAFPQ---------GRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQ 126 ++ Q G T D+ I ++ GK+P+ + G GLNL Sbjct: 232 EEELKQRGIAYALLTGSTRDRR-TPIHDFQSGKLPIFLISLKAGGTGLNLT 281 >gi|195377834|ref|XP_002047692.1| GJ11780 [Drosophila virilis] gi|194154850|gb|EDW70034.1| GJ11780 [Drosophila virilis] Length = 1679 Score = 80.8 bits (198), Expect = 1e-13, Method: Composition-based stats. Identities = 22/105 (20%), Positives = 44/105 (41%), Gaps = 8/105 (7%) Query: 95 DKDPCTIQEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIG 152 + ++++N + + G GLNLQ + +V F W+ + Q Sbjct: 1186 EDRGELLRKFNAKGSDYFVFLLSTRAGGLGLNLQT-ADTVVIFDSDWNPHQDLQA----- 1239 Query: 153 VTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 R + G + V V L+ N+++E +L R K + + ++ A Sbjct: 1240 QDRAHRIGQRNEVRVLRLMTVNSVEERILAAARYKLNMDEKVIQA 1284 >gi|164428480|ref|XP_965771.2| hypothetical protein NCU00631 [Neurospora crassa OR74A] gi|157072163|gb|EAA36535.2| conserved hypothetical protein [Neurospora crassa OR74A] Length = 1044 Score = 80.8 bits (198), Expect = 1e-13, Method: Composition-based stats. Identities = 28/156 (17%), Positives = 60/156 (38%), Gaps = 14/156 (8%) Query: 42 YDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTI 101 + ++ K +EK + ++ A RL + T D + Sbjct: 866 SEGKRPTKVKPEEKEDWKPTVFDQL--RKEANASRNQDARDRLLQY-----TWDHWQDSA 918 Query: 102 QEW-NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 + + + + +L + GLNL ++V +W+ Q ++R + G Sbjct: 919 KAFVEDPDVKVLLVSLKAGNAGLNLTVASRVIV-CDPFWNPFIEDQAVDR-----AYRIG 972 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 +R V VY ++ Q TI++ +++ K I + L+ Sbjct: 973 QQREVHVYKILVQETIEDRIIELQNLKRNIVETALD 1008 >gi|226292675|gb|EEH48095.1| chromodomain helicase DNA binding protein [Paracoccidioides brasiliensis Pb18] Length = 690 Score = 80.8 bits (198), Expect = 1e-13, Method: Composition-based stats. Identities = 32/162 (19%), Positives = 63/162 (38%), Gaps = 19/162 (11%) Query: 46 KHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAF---------PQGRTL 94 K+ + + K+ L ++ + N ++ F + L+ G T Sbjct: 482 KNDEWMQSGKVDKLCELLRRFKENGDRTLIFSQFTMVMDILEHVLQTVQMPFFRLDGSTS 541 Query: 95 DKDPCTI-QEWNEG-KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIG 152 +D I ++E +IP+ + G G+NL N ++ F ++ +E Q Sbjct: 542 VEDRQAILDAFHEQVEIPVFLLSTKAGGAGVNL-ACANKVIIFDSSFNPQEDVQA----- 595 Query: 153 VTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 R + G R V V L+ + TI+E + +TK + + Sbjct: 596 ENRAHRVGQTREVEVVRLVTRGTIEEQMYALGQTKLALDQRV 637 >gi|47226328|emb|CAG09296.1| unnamed protein product [Tetraodon nigroviridis] Length = 671 Score = 80.8 bits (198), Expect = 1e-13, Method: Composition-based stats. Identities = 35/219 (15%), Positives = 80/219 (36%), Gaps = 35/219 (15%) Query: 5 HKFQRELYCDLQGEN-------IEAFNS---ASKTVKCLQLANGAVYYDEEKH-----WK 49 + + ++ L + I+ NS A+ + QLA G EEK + Sbjct: 449 RRLKSDVLSQLPAKQRKVVTVTIDGINSRIKAALSAAAKQLAKGHPNKKEEKEALLVFYN 508 Query: 50 EVHDEKIKALEVIIEKA---NAAPIIVAYHFNSDLARLQKAFPQ---------GRTLDKD 97 + K++A+ I +V H L + + G T + Sbjct: 509 HTAEAKLQAIMEYITDMLEGGREKFLVFAHHKLVLDHITAELEKKNVVYIRIDGSTPSAE 568 Query: 98 PCTI-QEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTR 155 + +++ + + GL L + ++++F L+W+ Q +R+ Sbjct: 569 RQQLCEKFQFSSSSCVAVLSITAANMGLTL-HSADLVIFAELFWNPGVLIQAEDRV---- 623 Query: 156 QRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 + G V ++YL+A+ + D+ + ++ K + + + Sbjct: 624 -HRIGQTNNVNIHYLVAKGSADDHLWPLIQEKMNVLEQV 661 >gi|195054603|ref|XP_001994214.1| GH23502 [Drosophila grimshawi] gi|193896084|gb|EDV94950.1| GH23502 [Drosophila grimshawi] Length = 1982 Score = 80.8 bits (198), Expect = 1e-13, Method: Composition-based stats. Identities = 35/169 (20%), Positives = 69/169 (40%), Gaps = 29/169 (17%) Query: 52 HDEKIKALEVII---------EKANAAPIIVAYHFNSDLAR-----LQKAFPQGRTLDKD 97 H K+ AL+ ++ E + ++ + L L+K P+ L D Sbjct: 1746 HSAKLPALKQLLLDCGIGVQTESVSQHRALIFCQLKAMLDIVEHDLLRKHLPRVTYLRLD 1805 Query: 98 PCT--------IQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMI 148 + +N + I +L G GLNL G + ++F W+ + Q + Sbjct: 1806 GSVPASMRQDIVNNFNSDPSIDVLLLTTLVGGLGLNLT-GADTVIFVEHDWNPMKDLQAM 1864 Query: 149 ERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 +R + G K+ V VY LI +N+++E ++ + K + +++A Sbjct: 1865 DR-----AHRIGQKKVVNVYRLITRNSLEEKIMSLQKFKIVTANTVVSA 1908 >gi|169602773|ref|XP_001794808.1| hypothetical protein SNOG_04389 [Phaeosphaeria nodorum SN15] gi|160706250|gb|EAT88149.2| hypothetical protein SNOG_04389 [Phaeosphaeria nodorum SN15] Length = 1065 Score = 80.8 bits (198), Expect = 1e-13, Method: Composition-based stats. Identities = 29/156 (18%), Positives = 59/156 (37%), Gaps = 19/156 (12%) Query: 52 HDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQ----------GRTLDKDPC 99 K+ AL ++++ AN +V F S + L F + + + Sbjct: 848 DSGKVTALFALLKQYKANGDRALVFSQFTSVMDILSWVFDEHAIDFMRMDGSTPIAERQS 907 Query: 100 TIQEWNEGK-IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQ 158 + + + I + S G G+NL N +V F ++ ++ Q R + Sbjct: 908 LMDAFYADESIGVFMISTKSGGAGINL-ACANKVVIFDSSFNPQDDVQA-----ENRAHR 961 Query: 159 AGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 G R V V L+ + T++E + +K + ++ Sbjct: 962 VGQTREVEVVRLVTRGTVEEQIYALGVSKLELDKMV 997 >gi|212533265|ref|XP_002146789.1| DNA excision repair protein (Rad5), putative [Penicillium marneffei ATCC 18224] gi|210072153|gb|EEA26242.1| DNA excision repair protein (Rad5), putative [Penicillium marneffei ATCC 18224] Length = 1175 Score = 80.8 bits (198), Expect = 1e-13, Method: Composition-based stats. Identities = 31/183 (16%), Positives = 55/183 (30%), Gaps = 46/183 (25%) Query: 52 HDEKIKALEV-IIEKANAAPIIVAYHFNSDLARLQKAFPQGRTL----------DKDPCT 100 KI AL ++ + +V F S L + + Sbjct: 973 TSAKIHALITHLMRLPPNSKSVVFSQFTSFLDLIGPQLTKAGITFLRLDGSMPQKARAEV 1032 Query: 101 IQEWNEGKI-----------------------------PLLFAHPASCGHGLNLQYGGNI 131 ++++N +I +L + G GLNL N Sbjct: 1033 LRQFNRTEIYEEELELDEDAPVRGEAAATHSQTPQPSPNVLLISLRAGGVGLNLT-AANN 1091 Query: 132 LVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQ 191 + WW Q I+R+ + G R V V + +++I+ +L+ K I Sbjct: 1092 VFMMDPWWSFAVEAQAIDRV-----HRMGQLREVSVTRFVVKDSIEVRMLRVQEKKMNIA 1146 Query: 192 DLL 194 L Sbjct: 1147 GSL 1149 >gi|221053540|ref|XP_002258144.1| SNF2-family protein [Plasmodium knowlesi strain H] gi|193807977|emb|CAQ38681.1| SNF2-family protein, putative [Plasmodium knowlesi strain H] Length = 1048 Score = 80.8 bits (198), Expect = 1e-13, Method: Composition-based stats. Identities = 23/101 (22%), Positives = 42/101 (41%), Gaps = 6/101 (5%) Query: 93 TLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIG 152 T+++ + N I + + G GLNL N ++ W+ +R Sbjct: 929 TIERQKIIKRFSNNDNIFIFLLTTKAGGVGLNL-IAANHVILMDQDWNPH-----NDRQA 982 Query: 153 VTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDL 193 R + G K V++Y L +NTI+E +L+ + K + Sbjct: 983 EDRVHRLGQKNEVYIYRLCCKNTIEETILRCCKAKLHLDQA 1023 >gi|194745043|ref|XP_001955002.1| GF18554 [Drosophila ananassae] gi|190628039|gb|EDV43563.1| GF18554 [Drosophila ananassae] Length = 1921 Score = 80.8 bits (198), Expect = 1e-13, Method: Composition-based stats. Identities = 34/187 (18%), Positives = 71/187 (37%), Gaps = 34/187 (18%) Query: 34 QLANGAVYYDEEKHWKEVHDEKIKALEVII---------EKANAAPIIVAYHFNSDLARL 84 QLA D+ +H K+ AL+ ++ E + ++ + L + Sbjct: 1674 QLAQSNSSLDDIEH-----SAKLPALKQLLLDCGIGVQTESVSQHRALIFCQLKAMLDIV 1728 Query: 85 QK-------------AFPQGRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGN 130 + + + +N + I +L G GLNL G + Sbjct: 1729 EHDLLRRHLPSVTYLRLDGSVPASQRQDIVNNFNSDPSIDVLLLTTLVGGLGLNLT-GAD 1787 Query: 131 ILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 ++F W+ + Q ++R + G K+ V VY LI +N+++E ++ + K Sbjct: 1788 TVIFVEHDWNPMKDLQAMDR-----AHRIGQKKVVNVYRLITRNSLEEKIMGLQKFKILT 1842 Query: 191 QDLLLNA 197 + +++A Sbjct: 1843 ANTVVSA 1849 >gi|145207323|gb|AAH78216.2| Zranb3 protein [Danio rerio] Length = 541 Score = 80.8 bits (198), Expect = 1e-13, Method: Composition-based stats. Identities = 33/166 (19%), Positives = 63/166 (37%), Gaps = 20/166 (12%) Query: 48 WKEVHDEKIKALEVIIE---KANAAPIIVAYHFNSDLARLQKAFPQGRT----------- 93 +K+ K A++ I+ ++ +V H S L +A + + Sbjct: 312 YKQTAVAKAGAVKDYIKMMLESEQLKFLVFAHHLSMLQACTEAVIEAKAGYIRIDGSVPS 371 Query: 94 LDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGV 153 ++ + N+ + + G GL + +VF L+W+ +Q +R Sbjct: 372 AERIQLVHRFQNDPDTRVAVLSIQAAGQGLTFT-AASHVVFAELYWNPGHIKQAEDR--- 427 Query: 154 TRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 + G V ++YLIA+ T D ++ L K T+ LN K Sbjct: 428 --AHRIGQTATVHIHYLIAKGTFDTVMWAMLNRKETVTGSALNGKK 471 >gi|28278128|gb|AAH45534.1| SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1 [Homo sapiens] gi|167773841|gb|ABZ92355.1| SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1 [synthetic construct] gi|190690133|gb|ACE86841.1| SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1 protein [synthetic construct] gi|190691507|gb|ACE87528.1| SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1 protein [synthetic construct] Length = 1028 Score = 80.8 bits (198), Expect = 1e-13, Method: Composition-based stats. Identities = 29/157 (18%), Positives = 61/157 (38%), Gaps = 19/157 (12%) Query: 51 VHDEKIKALEVIIEKAN--AAPIIVAYHFNSDLARL---------QKAFPQGRT-LDKDP 98 + K + L I+ + +++ F L L + G+T + + Sbjct: 853 LDSGKFRVLGCILSELKQKGDRVVLFSQFTMMLDILEVLLKHHQHRYLRLDGKTQISERI 912 Query: 99 CTIQEWNEG-KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 I E+N I + + G G+NL N+++ + + +Q +R Sbjct: 913 HLIDEFNTDMDIFVFLLSTKAGGLGINLT-SANVVILHDIDCNPYNDKQAEDRC-----H 966 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 + G + V LI+Q TI+E +L+ + K ++ + Sbjct: 967 RVGQTKEALVIKLISQGTIEESMLKINQQKLKLEQDM 1003 >gi|195089759|ref|XP_001997485.1| GH22211 [Drosophila grimshawi] gi|193891548|gb|EDV90414.1| GH22211 [Drosophila grimshawi] Length = 1076 Score = 80.8 bits (198), Expect = 1e-13, Method: Composition-based stats. Identities = 35/169 (20%), Positives = 69/169 (40%), Gaps = 29/169 (17%) Query: 52 HDEKIKALEVII---------EKANAAPIIVAYHFNSDLAR-----LQKAFPQGRTLDKD 97 H K+ AL+ ++ E + ++ + L L+K P+ L D Sbjct: 840 HSAKLPALKQLLLDCGIGVQTESVSQHRALIFCQLKAMLDIVEHDLLRKHLPRVTYLRLD 899 Query: 98 PCT--------IQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMI 148 + +N + I +L G GLNL G + ++F W+ + Q + Sbjct: 900 GSVPASMRQDIVNNFNSDPSIDVLLLTTLVGGLGLNLT-GADTVIFVEHDWNPMKDLQAM 958 Query: 149 ERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 +R + G K+ V VY LI +N+++E ++ + K + +++A Sbjct: 959 DR-----AHRIGQKKVVNVYRLITRNSLEEKIMSLQKFKIVTANTVVSA 1002 >gi|189240994|ref|XP_968321.2| PREDICTED: similar to steroid receptor-interacting snf2 domain protein [Tribolium castaneum] Length = 1784 Score = 80.8 bits (198), Expect = 1e-13, Method: Composition-based stats. Identities = 30/169 (17%), Positives = 60/169 (35%), Gaps = 30/169 (17%) Query: 52 HDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQK---------------------AF 88 + K++ L II + A ++V L +++ Sbjct: 1047 NSAKMEILFCIIRESIALGDRLLVFSQSLITLDLIEQFLQMNVVPGDTQKWCRNTNYYRL 1106 Query: 89 PQGRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQM 147 + + I E+N KI + + G+NL G N +V W+ Q Sbjct: 1107 DGSTSALEREKLINEFNSNPKIHVFLVSTRAGSLGINL-IGANRVVVLDASWNPCHDTQA 1165 Query: 148 IERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + R + G ++ FVY L+ N +++ + R K + D +++ Sbjct: 1166 V-----CRVYRYGQRKPCFVYRLVVDNCLEKKIYDRQINKQGMSDRVVD 1209 >gi|221091560|ref|XP_002158128.1| PREDICTED: similar to predicted protein, partial [Hydra magnipapillata] Length = 590 Score = 80.8 bits (198), Expect = 1e-13, Method: Composition-based stats. Identities = 34/153 (22%), Positives = 58/153 (37%), Gaps = 17/153 (11%) Query: 47 HWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGR-TLDKDPCTIQEWN 105 KE + ++ L ++ +N I + S L Q G ++ K + +N Sbjct: 355 EIKENDPDLLQRLMSVVLVSNYTQTIDLFEKLSRLRGYQYVRLDGSMSIKKRMKVVDRFN 414 Query: 106 EGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKR 163 + L + G GLNL G N LV F W+ Q + R+ + G K+ Sbjct: 415 DPNSNDFLFMLSSKAGGCGLNL-IGANRLVMFDPDWNPANDDQAMARVW-----RDGQKK 468 Query: 164 AVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 TI+E +LQR K + +++ Sbjct: 469 E--------TGTIEEKILQRQTHKKALSSCVVD 493 >gi|312384392|gb|EFR29129.1| hypothetical protein AND_02166 [Anopheles darlingi] Length = 2232 Score = 80.8 bits (198), Expect = 1e-13, Method: Composition-based stats. Identities = 28/115 (24%), Positives = 48/115 (41%), Gaps = 10/115 (8%) Query: 86 KAFPQGRTLDKDPCT-IQEWNEGK---IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDL 141 G+T I+ +N+ + + + G G+NL N ++ W+ Sbjct: 1207 YYRLDGKTNKSIRHDLIRSFNDPRNTRVKCFLISAKAGGQGINLT-AANRVIILDTSWNP 1265 Query: 142 EEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 QQ I RI + G KR +VY L+A T++E V R TK + +++ Sbjct: 1266 SNDQQNIFRIF-----RLGQKRKCYVYRLLAMGTMEEKVYSRSVTKQALSFRVVD 1315 >gi|126433435|ref|YP_001069126.1| SNF2-related protein [Mycobacterium sp. JLS] gi|126233235|gb|ABN96635.1| SNF2-related protein [Mycobacterium sp. JLS] Length = 1122 Score = 80.8 bits (198), Expect = 1e-13, Method: Composition-based stats. Identities = 36/197 (18%), Positives = 79/197 (40%), Gaps = 24/197 (12%) Query: 8 QRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKA- 66 + E + + G + A+ +A + + + ++ + + K++ L I+E+A Sbjct: 656 EVEEWVPMSGADASAYRAAVEQRNFMAMRQASM-------RQGLKSSKMQRLIEIVEEAE 708 Query: 67 -NAAPIIVAYHFNSDLARLQKAFPQGRT--------LDKDPCTIQEWNEG-KIPLLFAHP 116 N ++V HF L+ + + P + + +++ K +L A Sbjct: 709 DNGRRVVVFSHFLDVLSDVARHMPGRVVGPLTGSVAASQRQVMVDDFSAAQKGAVLVAQI 768 Query: 117 ASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTI 176 + G GLN+Q +++V Q I R + G +V V+ L++ + Sbjct: 769 VAGGVGLNIQ-AASVVVICEPQLKPTTEWQAIAR-----AHRMGQLESVQVHRLLSDEGV 822 Query: 177 DELVLQRLRTKSTIQDL 193 D+ V + L TK + + Sbjct: 823 DQRVREILATKKLLFES 839 >gi|195110153|ref|XP_001999646.1| GI22957 [Drosophila mojavensis] gi|193916240|gb|EDW15107.1| GI22957 [Drosophila mojavensis] Length = 1948 Score = 80.8 bits (198), Expect = 1e-13, Method: Composition-based stats. Identities = 35/169 (20%), Positives = 68/169 (40%), Gaps = 29/169 (17%) Query: 52 HDEKIKALEVII---------EKANAAPIIVAYHFNSDLAR-----LQKAFPQGRTLDKD 97 H K+ AL+ ++ E + ++ + L L+K P L D Sbjct: 1713 HSAKLPALKQLLLDCGIGVQTESVSQHRALIFCQLKAMLDIVEHDLLRKHLPSVTYLRLD 1772 Query: 98 PCT--------IQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMI 148 + +N + I +L G GLNL G + ++F W+ + Q + Sbjct: 1773 GSVPASLRQDIVNNFNSDPSIDVLLLTTLVGGLGLNLT-GADTVIFVEHDWNPMKDLQAM 1831 Query: 149 ERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 +R + G K+ V VY LI +N+++E ++ + K + +++A Sbjct: 1832 DR-----AHRIGQKKVVNVYRLITRNSLEEKIMSLQKFKILTANTVVSA 1875 >gi|94264307|ref|ZP_01288100.1| SNF2-related:Helicase-like:SWIM Zn-finger:DEAD/DEAH box helicase-like [delta proteobacterium MLMS-1] gi|93455273|gb|EAT05483.1| SNF2-related:Helicase-like:SWIM Zn-finger:DEAD/DEAH box helicase-like [delta proteobacterium MLMS-1] Length = 1022 Score = 80.8 bits (198), Expect = 1e-13, Method: Composition-based stats. Identities = 35/174 (20%), Positives = 68/174 (39%), Gaps = 22/174 (12%) Query: 35 LANGAVYYDEEKHWKEVHDEKIKALEVIIEK---ANAAPIIVAYHFNSD----LARLQK- 86 +A A ++ + V KI L I+++ + +V + RL++ Sbjct: 590 MACDAAGLVDK---ESVGSPKIDELAQILDEVCLQSGLKAVVFSQWELMTRMVEQRLRRL 646 Query: 87 -----AFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDL 141 G K ++ + L+F + G GLNLQ ++LV + W+ Sbjct: 647 GIGYVRLHGGVPTAKRGDLLERFRSDDSVLVFLSTDAGGVGLNLQ-SASVLVNLDVPWNP 705 Query: 142 EEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 +Q RI + G V + ++A N+ +E VL ++ K + D ++ Sbjct: 706 AVLEQRNGRI-----HRLGQPNKVQIITMVAANSYEEQVLSLVQNKQALFDQVI 754 >gi|224009730|ref|XP_002293823.1| predicted protein [Thalassiosira pseudonana CCMP1335] gi|220970495|gb|EED88832.1| predicted protein [Thalassiosira pseudonana CCMP1335] Length = 487 Score = 80.8 bits (198), Expect = 1e-13, Method: Composition-based stats. Identities = 29/172 (16%), Positives = 59/172 (34%), Gaps = 32/172 (18%) Query: 36 ANGAVYYDEEKHWKEVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARL--------- 84 A+GA K L+ ++E+ + +++ S L + Sbjct: 322 ASGAHMGSAHPQLLIRASGKFALLDRMLERLFKDKHQVLIFSQMTSLLNVIEDYLLFRQW 381 Query: 85 QKAFPQGRT-LDKDPCTIQEWNEGKIP--------------LLFAHPASCGHGLNLQYGG 129 + G T +D+ + +N K + + G G+NL Sbjct: 382 KYCRIDGSTKIDERQRQMDVFNSEKTAGKGGTRNDGDDRHFVFLLSTRAGGLGINL-ATA 440 Query: 130 NILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVL 181 + + F W+ + Q ++R + G R V VY L+ N++D ++ Sbjct: 441 DTCIIFDSDWNPHQDSQAMDRC-----HRIGQNRPVAVYRLLTVNSVDVEMM 487 >gi|147866122|emb|CAN83037.1| hypothetical protein VITISV_034336 [Vitis vinifera] Length = 1054 Score = 80.8 bits (198), Expect = 1e-13, Method: Composition-based stats. Identities = 28/182 (15%), Positives = 67/182 (36%), Gaps = 32/182 (17%) Query: 42 YDEEKHWKEVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQKAFPQGR----TLD 95 Y+E +H + K+ L+ +++K + +++ L LQ + LD Sbjct: 434 YEEGEHLVQ-ASGKLIILDQLLQKLYNSGHRVLLFAQMTHTLDILQDFMELRKYSYERLD 492 Query: 96 KDPCTIQEW---------------NEGKIP----LLFAHPASCGHGLNLQYGGNILVFFS 136 + + N + + + G GLNL + ++F+ Sbjct: 493 GSVRAEERFSAIRSFSRQIVEGSLNSQDVQSSAFVFMISTRAGGVGLNL-VAADTVIFYE 551 Query: 137 LWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 W+ + +Q ++R + G V L+ T++E++++R K + ++ Sbjct: 552 QDWNPQVDKQALQR-----AHRIGQMNHVLSINLVTGRTVEEIIMRRAERKLQLSHNVVG 606 Query: 197 AL 198 + Sbjct: 607 EV 608 >gi|146174330|ref|XP_001019329.2| SNF2 family N-terminal domain containing protein [Tetrahymena thermophila] gi|146144785|gb|EAR99084.2| SNF2 family N-terminal domain containing protein [Tetrahymena thermophila SB210] Length = 1016 Score = 80.8 bits (198), Expect = 1e-13, Method: Composition-based stats. Identities = 29/158 (18%), Positives = 64/158 (40%), Gaps = 15/158 (9%) Query: 52 HDEKIKALEVII-----EKANAAPIIVAYHFNSDLARLQK--AFPQGRTLDKDPCTIQEW 104 + K+ L+ ++ EK A +++ F + L + +++ + E+ Sbjct: 358 NSGKMVVLDKLLKKLYQEKEKAHQVLIFTQFTTCLGKAWNYCRIDGSTEVNEREQMMNEF 417 Query: 105 NEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFK 162 + + G G+NL N +V F ++ + Q ++R + G Sbjct: 418 QRDDSDKFVFLLSTRAGGLGINLTK-ANFVVIFDSDFNPQIDLQAMDR-----AYRIGQT 471 Query: 163 RAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKK 200 R V V LI Q T++E +++R K + L++ + + Sbjct: 472 REVKVIRLITQFTVEEKIIERQGIKLKLDQLIIQSGRS 509 >gi|10436220|dbj|BAB14759.1| unnamed protein product [Homo sapiens] Length = 361 Score = 80.8 bits (198), Expect = 1e-13, Method: Composition-based stats. Identities = 29/157 (18%), Positives = 62/157 (39%), Gaps = 19/157 (12%) Query: 51 VHDEKIKALEVIIEKAN--AAPIIVAYHFNSDLARL---------QKAFPQGRT-LDKDP 98 + K + L I+ + +++ F L L + G+T + + Sbjct: 186 LDSGKFRVLGCILSELKQKGDRVVLFSQFTMMLDILEVLLKHHQHRYLRLDGKTQISERI 245 Query: 99 CTIQEWNEG-KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 I E+N I + + G G++L N+++ + + +Q +R Sbjct: 246 HLIDEFNTDMDIFVFLLSTKAGGLGIDLT-SANVVILHDIDCNPYNDKQAEDRC-----H 299 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 + G + V V LI+Q TI+E +L+ + K ++ + Sbjct: 300 RVGQTKEVLVIKLISQGTIEESMLKINQQKLKLEQDM 336 >gi|238853530|ref|ZP_04643903.1| superfamily II DNA/RNA helicase, SNF2 family [Lactobacillus gasseri 202-4] gi|238833851|gb|EEQ26115.1| superfamily II DNA/RNA helicase, SNF2 family [Lactobacillus gasseri 202-4] Length = 504 Score = 80.8 bits (198), Expect = 1e-13, Method: Composition-based stats. Identities = 32/153 (20%), Positives = 59/153 (38%), Gaps = 18/153 (11%) Query: 52 HDEKIKALEVIIEKANA--APIIVAYHFNSD-LARLQKAFP--------QGRTLDKDPCT 100 +KI+ + I ++ +IV F + L L K P + ++ Sbjct: 309 DSQKIEQIINICVDSHENSEKVIVFSFFKNYVLKLLNKKLPFLADDIISGDLSSNQRQEV 368 Query: 101 IQEW-NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQA 159 I ++ +L + G GLN+Q N ++ W Q I R + Sbjct: 369 IDKFSENPNQNVLLVQIDAGGFGLNIQ-AANRVILCEPQWKPSTENQAISR-----AYRM 422 Query: 160 GFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQD 192 G R V VY L+ + ++DE +++ + K I + Sbjct: 423 GQNRNVMVYRLLTKESVDETMMEIIHEKEDIFN 455 >gi|315446159|ref|YP_004079038.1| DNA/RNA helicase, superfamily II, SNF2 family [Mycobacterium sp. Spyr1] gi|315264462|gb|ADU01204.1| DNA/RNA helicase, superfamily II, SNF2 family [Mycobacterium sp. Spyr1] Length = 1124 Score = 80.8 bits (198), Expect = 1e-13, Method: Composition-based stats. Identities = 36/198 (18%), Positives = 81/198 (40%), Gaps = 26/198 (13%) Query: 8 QRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKA- 66 + + + + ++ A+ +A + + + + + + K++ L I+E+A Sbjct: 656 EVDEWVPMSPADVSAYRAAVEQRNFMAMR-------QAGMRQGRNSTKMQRLIEIVEEAE 708 Query: 67 -NAAPIIVAYHFNSDLARLQKAFPQGRTL---------DKDPCTIQEWNEG-KIPLLFAH 115 N ++V HF L + + P GR ++ + +++ K +L A Sbjct: 709 DNGRRVVVFSHFLDVLNDVARHMP-GRVFGPLTGSVAANQRQVLVDDFSAAQKGAVLVAQ 767 Query: 116 PASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNT 175 + G GLN+Q +++V Q I R + G +V V+ L++ Sbjct: 768 IVAGGVGLNIQ-AASVVVICEPQLKPTTEWQAIAR-----AHRMGQLESVQVHRLLSDEG 821 Query: 176 IDELVLQRLRTKSTIQDL 193 +D+ V + L TK ++ + Sbjct: 822 VDQRVREILATKKSLFES 839 >gi|302677518|ref|XP_003028442.1| hypothetical protein SCHCODRAFT_17379 [Schizophyllum commune H4-8] gi|300102130|gb|EFI93539.1| hypothetical protein SCHCODRAFT_17379 [Schizophyllum commune H4-8] Length = 939 Score = 80.8 bits (198), Expect = 1e-13, Method: Composition-based stats. Identities = 30/163 (18%), Positives = 57/163 (34%), Gaps = 18/163 (11%) Query: 45 EKHWKEVHDEKIKALEVIIE-KANAAPIIVAYHFNSDLARLQK----------AFPQGRT 93 E + +K LE++ E A IV + S L + F Sbjct: 731 SDDDIEPSTKMLKLLELLREWDATGDKTIVYSQWTSMLDLVDTVFSIHGISALRFDGRMD 790 Query: 94 LDKDPCTIQEWNEGKIP-LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIG 152 + + + P ++ GLNL N ++ L W+ Q +R Sbjct: 791 RQQRDAVLAAFKRPGGPKVILISTKCGSVGLNL-VSANRVINLDLSWNYAAESQAYDRC- 848 Query: 153 VTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 + G + V++ L+ ++TI+E +L+ K + + L Sbjct: 849 ----HRIGQDKPVWIKRLVVEDTIEERMLKLQDVKVGLAEAAL 887 >gi|224110590|ref|XP_002315568.1| chromatin remodeling complex subunit [Populus trichocarpa] gi|222864608|gb|EEF01739.1| chromatin remodeling complex subunit [Populus trichocarpa] Length = 1050 Score = 80.4 bits (197), Expect = 1e-13, Method: Composition-based stats. Identities = 35/220 (15%), Positives = 77/220 (35%), Gaps = 35/220 (15%) Query: 6 KFQRELYCDLQGENIEAFNSASKTVKCLQLA-----------------NGAVYYDEEKHW 48 + Q++ Y L +++E N+ + + L +A G Y + Sbjct: 421 QMQKQYYKALLQKDLEVVNAGGERKRLLNIAMQLRKCCNHPYLFQGAEPGPPYSTGDHLV 480 Query: 49 KEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQ---------KAFPQGRTLDKDP- 98 + + K + +++ L L+ G T +D Sbjct: 481 TNAGKMVLLDKLLPKLKERDSRVLIFSQMTRLLDILEDYLMFRGYLYCRIDGNTGGEDRD 540 Query: 99 CTIQEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 +I +N+ + + G G+NL ++++ + W+ + Q R Sbjct: 541 ASIDAFNKPGSEKFCFLLSTRAGGLGINL-ATADVVILYDSDWNPQVDLQA-----QDRA 594 Query: 157 RQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + G K+ V V+ + TI+E V++R K + L++ Sbjct: 595 HRIGQKKEVQVFRFCTEYTIEEKVIERAYKKLALDALVIQ 634 >gi|164422685|ref|XP_001727986.1| hypothetical protein NCU10809 [Neurospora crassa OR74A] gi|157069777|gb|EDO64895.1| predicted protein [Neurospora crassa OR74A] Length = 702 Score = 80.4 bits (197), Expect = 1e-13, Method: Composition-based stats. Identities = 30/153 (19%), Positives = 59/153 (38%), Gaps = 21/153 (13%) Query: 50 EVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQ---------GRTLDKDP-C 99 +V D ++AL+ ++ + S L L + Q GRT + + Sbjct: 532 KVRDSVLQALQ----SQTGIKHLIFSAWTSSLRYLAQLMQQAGIPHAQIDGRTSNAERLR 587 Query: 100 TIQEWNEG-KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQ 158 I+ + E ++P+L + GL L ++ + W+ +Q I R + Sbjct: 588 HIKAFQEDSQVPVLLMSIGTGAVGLTLTAASHVHI-IEPQWNPSVEEQAIGR-----ALR 641 Query: 159 AGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQ 191 G + V V I + T+++ +L + K I Sbjct: 642 MGQTKEVVVTRYIMKGTVEQSILSLQQKKKNIS 674 >gi|303287156|ref|XP_003062867.1| predicted protein [Micromonas pusilla CCMP1545] gi|226455503|gb|EEH52806.1| predicted protein [Micromonas pusilla CCMP1545] Length = 1542 Score = 80.4 bits (197), Expect = 1e-13, Method: Composition-based stats. Identities = 32/207 (15%), Positives = 65/207 (31%), Gaps = 43/207 (20%) Query: 18 ENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAY 75 E A A++ K A A + K++ L+ ++ + A ++ Sbjct: 684 EEAFATQQAARLAKPRTTATAAQLVNCSG--------KLQLLDKLLPRLKAGGHRALIFS 735 Query: 76 HFNSDLARLQ----------KAFPQGRTLDKDPCTIQEW-----------------NEGK 108 L L+ + G T I + ++ Sbjct: 736 QMTRVLDVLEDYCRSRKHSYERLDGGVTGRARQAAIDRFCDGGGGDGGGENAAGAGDDDG 795 Query: 109 IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVY 168 L + G G+NL + ++ F W+ + Q + R + G + V VY Sbjct: 796 AFLFLLSTRAGGQGINL-VAADTVIVFDSDWNPQNDAQALAR-----AHRIGQTKPVQVY 849 Query: 169 YLIAQNTIDELVLQRLRTKSTIQDLLL 195 L+ + T + +L R K ++ + Sbjct: 850 RLVMRATYEREMLDRAAMKLGLEQAIF 876 >gi|313228772|emb|CBY17923.1| unnamed protein product [Oikopleura dioica] Length = 985 Score = 80.4 bits (197), Expect = 1e-13, Method: Composition-based stats. Identities = 27/162 (16%), Positives = 61/162 (37%), Gaps = 19/162 (11%) Query: 46 KHWKEVHDEKIKALEVIIEKA--NAAPIIVAYHF---NSDLAR------LQKAFPQGRTL 94 K ++ K K L+ ++ K +++ F + R ++ G T Sbjct: 743 KKDDILNSGKFKVLDTLLPKLFEEGHRVLLFSQFVIMMDIMERYMTARKIKYMRLDGSTP 802 Query: 95 DKDPCT-IQEWNEG-KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIG 152 +D I +N +I L + G G+NL +++ + + +Q +R Sbjct: 803 VEDRLDMIDTFNADSEISLFMVSTRAGGLGINLTSADTVIIH-DIDPNPYNDKQAEDRC- 860 Query: 153 VTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 + G + V + LI ++TI+ + + K ++ + Sbjct: 861 ----HRVGQTKQVNIIRLIVKDTIEVRMRKLAVEKLNLESKM 898 >gi|300175571|emb|CBK20882.2| unnamed protein product [Blastocystis hominis] Length = 571 Score = 80.4 bits (197), Expect = 1e-13, Method: Composition-based stats. Identities = 37/170 (21%), Positives = 65/170 (38%), Gaps = 21/170 (12%) Query: 42 YDEEKHWKEVHDEKIKALEVIIEK---ANAAPIIVAYHFNSDLARLQ---------KAFP 89 D+ + K++A+E+++ I+V + L L Sbjct: 320 DDQNQRDFTSQSVKMEAVELLLASILSHTDEQILVISSYTQILDYLGSFCDSKKWGYFRL 379 Query: 90 QGRT-LDKDPCTIQEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 G+T + + + +N L + G GLN+ G + +V W+ Q Sbjct: 380 DGQTDVAQRQSLVNSFNHRYTSKRLFILSARAGGVGLNIT-GASRVVMLEPAWNPAIDLQ 438 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 I R + G R VFVY L +I+E++LQR K I D+ ++ Sbjct: 439 SIARAW-----RFGQTRRVFVYRLFVAGSIEEVMLQRQLLKKAIADVAVD 483 >gi|221066987|ref|ZP_03543092.1| helicase domain protein [Comamonas testosteroni KF-1] gi|220712010|gb|EED67378.1| helicase domain protein [Comamonas testosteroni KF-1] Length = 503 Score = 80.4 bits (197), Expect = 1e-13, Method: Composition-based stats. Identities = 35/152 (23%), Positives = 58/152 (38%), Gaps = 17/152 (11%) Query: 60 EVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRT----------LDKDPCTIQEWN-EGK 108 E + +I+ + S + L++A L + + + + Sbjct: 331 ETVQAMGEDDKLIIFCEYMSTVEALKQALASLGVGCVSLVGSDSLKRRQAAVDAFQRDAS 390 Query: 109 IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVY 168 I + + G G+ L NI+ F S+ W +Q +R + G R V V Sbjct: 391 IKVFIGTTMAAGVGITLT-AANIVAFASMPWTPALMRQAEDR-----AYRLGQIRDVLVL 444 Query: 169 YLIAQNTIDELVLQRLRTKSTIQDLLLNALKK 200 I Q TIDE VLQ+ K T + ++ A KK Sbjct: 445 VPIIQGTIDEGVLQQQENKHTTEIEVVEAAKK 476 >gi|322706831|gb|EFY98411.1| SNF2 family helicase/ATPase, putative [Metarhizium anisopliae ARSEF 23] Length = 1158 Score = 80.4 bits (197), Expect = 1e-13, Method: Composition-based stats. Identities = 32/168 (19%), Positives = 62/168 (36%), Gaps = 27/168 (16%) Query: 51 VHDEKIKAL-EVIIEKANAA---------PIIVAYHFNSDLARLQKAFPQGR-------- 92 K KAL E +++ A+ +V + S L ++ A Sbjct: 974 GPHTKTKALVEDLLKSKAASQASPDEPPFKSVVFSGWTSHLDLIELALKAAGITFVRLDG 1033 Query: 93 --TLDKDPCTIQEWNEGK-IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIE 149 T ++++ E + ++ + G GLNL GN + ++ Q I+ Sbjct: 1034 SMTRMARTAAMEKFREDNTVEVILVSIMAGGLGLNLT-AGNTVYVMEPQYNPAAEAQAID 1092 Query: 150 RIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 R+ + G KR V I Q++ +E +L+ K + L ++ Sbjct: 1093 RV-----HRLGQKRPVRTVRYIMQDSFEEKMLELQEKKMKLASLSMDG 1135 >gi|209880686|ref|XP_002141782.1| SNF2/RAD54 helicase family protein [Cryptosporidium muris RN66] gi|209557388|gb|EEA07433.1| SNF2/RAD54 helicase family protein [Cryptosporidium muris RN66] Length = 854 Score = 80.4 bits (197), Expect = 1e-13, Method: Composition-based stats. Identities = 27/165 (16%), Positives = 59/165 (35%), Gaps = 23/165 (13%) Query: 46 KHWKEVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQK--------------AFP 89 K+ + IIEK +V H L +++ Sbjct: 684 DELVLGDSCKLIKMHQIIEKKVIRREKCLVFCHHTMLLDIVEEYIKLKFGDKTDFYIRLD 743 Query: 90 QGRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMI 148 +D ++++ + + G GLNL + ++ + ++ + I Sbjct: 744 GTTPIDTRQKLVEQFQTSSSTLIFLLSTKAAGQGLNLT-AASTVIMMDIDYNPQ-----I 797 Query: 149 ERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDL 193 ER R + G + V ++ LI +N+I+E +L+ +K ++ Sbjct: 798 ERQAEDRVHRLGQSKDVSIFKLICRNSIEEDILKCCESKLSLDAA 842 >gi|115473589|ref|NP_001060393.1| Os07g0636200 [Oryza sativa Japonica Group] gi|50508331|dbj|BAD30182.1| SWI/SNF-related matrix-associated actin-dependent regulator of chromatin a-like [Oryza sativa Japonica Group] gi|113611929|dbj|BAF22307.1| Os07g0636200 [Oryza sativa Japonica Group] gi|215697224|dbj|BAG91218.1| unnamed protein product [Oryza sativa Japonica Group] Length = 747 Score = 80.4 bits (197), Expect = 1e-13, Method: Composition-based stats. Identities = 29/158 (18%), Positives = 58/158 (36%), Gaps = 19/158 (12%) Query: 54 EKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTL-----------DKDPCTIQ 102 + L IIE ++ H S L + + + + + Sbjct: 556 AVLDYLGTIIEA--ECKFLIFAHHQSMLEAIHQHLLKKKVKCIRIDGQTPVPVRQTLVTD 613 Query: 103 EWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFK 162 N+ I + G GL L + ++F L W + Q +R + G Sbjct: 614 FQNKDDIKAAVLSIKAGGVGLTLT-AASTVIFAELSWTPGDLIQAEDR-----AHRIGQV 667 Query: 163 RAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKK 200 +V +YYL+A +T+D+++ ++ K +L+ +K Sbjct: 668 SSVNIYYLLANDTVDDIIWDVVQGKLENLGQMLDGQEK 705 >gi|47211649|emb|CAF94986.1| unnamed protein product [Tetraodon nigroviridis] Length = 1320 Score = 80.4 bits (197), Expect = 1e-13, Method: Composition-based stats. Identities = 27/177 (15%), Positives = 60/177 (33%), Gaps = 38/177 (21%) Query: 52 HDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQ------------------------ 85 + K+ L +IE++ ++V S L ++ Sbjct: 807 NSAKMVLLFHLIEESVRKGDKLLVFSQSLSTLTVIENFLVKRPVPPSPQKDKPNQNWVRN 866 Query: 86 ---KAFPQGRTLDKDPCTIQEWNEGKIP---LLFAHPASCGHGLNLQYGGNILVFFSLWW 139 T + I ++N+ + + G+NL G N +V F W Sbjct: 867 VNYYRLDGSTTASERERLINQFNDPSNTSVWVFLLSTRAGCLGVNL-IGANRVVVFDASW 925 Query: 140 DLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + Q + R + G ++ +Y L+ T+++ + R +K + D +++ Sbjct: 926 NPCHDAQAV-----CRVYRYGQRKPCHIYRLVCDFTLEKKIYDRQISKQGMSDRVVD 977 >gi|145335142|ref|NP_172040.2| chr31 (chromatin remodeling 31); ATP binding / DNA binding / helicase/ nucleic acid binding [Arabidopsis thaliana] gi|332189724|gb|AEE27845.1| chromatin remodeling 31 [Arabidopsis thaliana] Length = 1410 Score = 80.4 bits (197), Expect = 1e-13, Method: Composition-based stats. Identities = 32/162 (19%), Positives = 63/162 (38%), Gaps = 25/162 (15%) Query: 53 DEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAF-------PQGRTL--------D 95 K + L +E + ++V + L + K P L Sbjct: 1198 SVKTRFLMEFVELCEVIKEKVLVFSQYIDPLKLIMKHLVSRFKWNPGEEVLYMHGKLEQK 1257 Query: 96 KDPCTIQEWNEGK--IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGV 153 + I E+N+ K + A +C G++L G + ++ + W+ +ER + Sbjct: 1258 QRQTLINEFNDPKSKAKVFLASTKACSEGISL-VGASRVILLDVVWN-----PAVERQAI 1311 Query: 154 TRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 +R + G KR V+ Y+L+A+ T + + K I +L+ Sbjct: 1312 SRAYRIGQKRIVYTYHLVAKGTPEGPKYCKQAQKDRISELVF 1353 >gi|110740804|dbj|BAE98499.1| hypothetical protein [Arabidopsis thaliana] Length = 1410 Score = 80.4 bits (197), Expect = 1e-13, Method: Composition-based stats. Identities = 32/162 (19%), Positives = 63/162 (38%), Gaps = 25/162 (15%) Query: 53 DEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAF-------PQGRTL--------D 95 K + L +E + ++V + L + K P L Sbjct: 1198 SVKTRFLMEFVELCEVIKEKVLVFSQYIDPLKLIMKHLVSRFKWNPGEEVLYMHGKLEQK 1257 Query: 96 KDPCTIQEWNEGK--IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGV 153 + I E+N+ K + A +C G++L G + ++ + W+ +ER + Sbjct: 1258 QRQTLINEFNDPKSKAKVFLASTKACSEGISL-VGASRVILLDVVWN-----PAVERQAI 1311 Query: 154 TRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 +R + G KR V+ Y+L+A+ T + + K I +L+ Sbjct: 1312 SRAYRIGQKRIVYTYHLVAKGTPEGPKYCKQAQKDRISELVF 1353 >gi|8778726|gb|AAF79734.1|AC005106_15 T25N20.14 [Arabidopsis thaliana] Length = 1465 Score = 80.4 bits (197), Expect = 1e-13, Method: Composition-based stats. Identities = 32/162 (19%), Positives = 63/162 (38%), Gaps = 25/162 (15%) Query: 53 DEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAF-------PQGRTL--------D 95 K + L +E + ++V + L + K P L Sbjct: 1253 SVKTRFLMEFVELCEVIKEKVLVFSQYIDPLKLIMKHLVSRFKWNPGEEVLYMHGKLEQK 1312 Query: 96 KDPCTIQEWNEGK--IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGV 153 + I E+N+ K + A +C G++L G + ++ + W+ +ER + Sbjct: 1313 QRQTLINEFNDPKSKAKVFLASTKACSEGISL-VGASRVILLDVVWN-----PAVERQAI 1366 Query: 154 TRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 +R + G KR V+ Y+L+A+ T + + K I +L+ Sbjct: 1367 SRAYRIGQKRIVYTYHLVAKGTPEGPKYCKQAQKDRISELVF 1408 >gi|313768339|ref|YP_004062019.1| hypothetical protein MpV1_136 [Micromonas sp. RCC1109 virus MpV1] gi|312599035|gb|ADQ91059.1| hypothetical protein MpV1_136 [Micromonas sp. RCC1109 virus MpV1] Length = 485 Score = 80.4 bits (197), Expect = 1e-13, Method: Composition-based stats. Identities = 30/162 (18%), Positives = 62/162 (38%), Gaps = 19/162 (11%) Query: 53 DEKIKALEVIIEKANAAPIIVAYHFNSDLARLQK-------AFPQGRTLDKDPCTIQEWN 105 +K++ L +IE ++ F ++ +Q ++ I+ + Sbjct: 307 SKKMETLFDMIESHPNEKSLIFCQFRGEMNHIQSQLKCPTFRIDGSVPKEERVKQIEGFK 366 Query: 106 EGKI-PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA 164 + + + S G GLNLQ + + + W+ Q I R + G +A Sbjct: 367 KAQSGAVFIIQIKSGGQGLNLQEATRVYI-TAPSWNPATELQAIGR-----AHRTGQTKA 420 Query: 165 VFVYYLIAQN-----TIDELVLQRLRTKSTIQDLLLNALKKE 201 V+V LI + +++E ++ KS + +LN + E Sbjct: 421 VYVKKLIYKECPRFVSVEEEMMALQGHKSIVCSKVLNDERIE 462 >gi|227821158|ref|YP_002825128.1| superfamily II DNA/RNA helicase and SNF2 family-related protein [Sinorhizobium fredii NGR234] gi|227340157|gb|ACP24375.1| superfamily II DNA/RNA helicase and SNF2 family-related protein [Sinorhizobium fredii NGR234] Length = 1072 Score = 80.4 bits (197), Expect = 1e-13, Method: Composition-based stats. Identities = 37/179 (20%), Positives = 67/179 (37%), Gaps = 36/179 (20%) Query: 54 EKIKALEVIIE--KANAAPIIVA-------YHFNSDLARLQKAFPQG------RTLDKDP 98 ++ A I+ K+ +V F +++ RL+ T+D Sbjct: 796 ARVDAAMDILRHIKSKGERALVFVENRDVQAWF-AEVVRLEFNLDTVMIINGDTTIDARK 854 Query: 99 CTIQEW-----NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGV 153 + N+G +L P + G GL L N ++ S WW+ +Q +R Sbjct: 855 EITDRFQRHLTNDGGFDVLVLGPRAAGTGLTLT-AANHVIHLSRWWNPAVEEQCNDR--- 910 Query: 154 TRQRQAGFKRAVFVYYLIA------QNTIDELVLQRLRTKSTIQDLLL---NALKKETI 203 + G + V V+ +A + D L+ + ++ K TI D +L A + ET Sbjct: 911 --THRIGQTKPVTVHIPLAVHTRLGAGSFDCLLQRLMKRKRTIADRVLWPAEATESETR 967 >gi|195446151|ref|XP_002070651.1| GK12181 [Drosophila willistoni] gi|194166736|gb|EDW81637.1| GK12181 [Drosophila willistoni] Length = 1953 Score = 80.4 bits (197), Expect = 1e-13, Method: Composition-based stats. Identities = 38/195 (19%), Positives = 73/195 (37%), Gaps = 30/195 (15%) Query: 13 CDLQGENIEAFNSASKTVKCLQL---ANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAA 69 L ++ ++K QL V + + + ++KA+ I+E Sbjct: 1707 LALSNSTLDDIEHSAKLPALKQLLLDCGIGVQTESVSQHRALIFCQLKAMLDIVE----- 1761 Query: 70 PIIVAYHFNSDLAR-----LQKAFPQGRTLDKDPCTI-QEWN-EGKIPLLFAHPASCGHG 122 DL R + G I +N + I +L G G Sbjct: 1762 ---------HDLLRRHLPSVTYLRLDGSVPASQRQDIVNNFNSDPSIDVLLLTTLVGGLG 1812 Query: 123 LNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQ 182 LNL G + ++F W+ + Q ++R + G K+ V VY LI +N+++E ++ Sbjct: 1813 LNLT-GADTVIFVEHDWNPMKDLQAMDR-----AHRIGQKKVVNVYRLITRNSLEEKIMG 1866 Query: 183 RLRTKSTIQDLLLNA 197 + K + +++A Sbjct: 1867 LQKFKILTANTVVSA 1881 >gi|189239270|ref|XP_001810058.1| PREDICTED: similar to transcriptional regulator ATRX (X-linked helicase II) [Tribolium castaneum] Length = 1848 Score = 80.4 bits (197), Expect = 1e-13, Method: Composition-based stats. Identities = 32/192 (16%), Positives = 63/192 (32%), Gaps = 42/192 (21%) Query: 41 YYDEEKHWKEVHDEKIKALEVIIEKAN--AAPIIVAYH-------FNSDLARLQKAFPQG 91 Y D ++ H K+ L I+++ ++V L R+ A G Sbjct: 1441 YCDGDELNNIAHSSKLFLLFEILKECEQIGDKVLVFSQSLYSLNIIEYFLGRIHDATQAG 1500 Query: 92 RTL------------------------DKDPCTIQEWNEG---KIPLLFAHPASCGHGLN 124 T D + +N + L + G G+N Sbjct: 1501 ETDSVGGYSGSWCVGLDYFRLDGSSSCDSRSMWCRTFNNPTNTRARLFLISTKAGGLGIN 1560 Query: 125 LQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRL 184 L N ++ F + W+ Q I R+ + G + ++Y + T++ + +R Sbjct: 1561 L-VAANRVIIFDVSWNPSHDIQSIYRV-----YRFGQTKPCYIYRFVTLGTMEMKIYERQ 1614 Query: 185 RTKSTIQDLLLN 196 TK I +++ Sbjct: 1615 VTKQAISKRVID 1626 >gi|193784122|dbj|BAG53666.1| unnamed protein product [Homo sapiens] Length = 1056 Score = 80.4 bits (197), Expect = 1e-13, Method: Composition-based stats. Identities = 32/178 (17%), Positives = 65/178 (36%), Gaps = 37/178 (20%) Query: 52 HDEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQKAFPQGRT---------------- 93 + K+ L +IE++ I+V S LA +++ + Sbjct: 310 NSPKMVLLFHLIEESVKLGDKILVFSQSLSTLALIEEFLGKREVPCPPGTEGQGAQKWVR 369 Query: 94 ----------LDKDPCTIQEWNEGKIP---LLFAHPASCGHGLNLQYGGNILVFFSLWWD 140 + I ++N+ L + G+NL G N +V F W+ Sbjct: 370 NISHFHGSTPAFERERLINQFNDPSNLTTWLFLLSTRAGCLGVNL-IGANRVVVFDASWN 428 Query: 141 LEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNAL 198 Q + R + G K+ ++Y L+A T+++ + R +K + D +++ L Sbjct: 429 PCHDAQAV-----CRVYRYGQKKPCYIYRLVADYTLEKKIYDRQISKQGMSDRVVDDL 481 >gi|169616922|ref|XP_001801876.1| hypothetical protein SNOG_11638 [Phaeosphaeria nodorum SN15] gi|111060226|gb|EAT81346.1| hypothetical protein SNOG_11638 [Phaeosphaeria nodorum SN15] Length = 1020 Score = 80.4 bits (197), Expect = 1e-13, Method: Composition-based stats. Identities = 28/201 (13%), Positives = 75/201 (37%), Gaps = 30/201 (14%) Query: 9 RELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWK--EVHDEKIKALEVIIEKA 66 ++ L+ E++ + A+K +L ++ W + ++ L I K Sbjct: 815 KKTLAQLKKESLR--SKAAKQKYLRRL---------DRTWIPSAKTSKVVELLTDIKMKD 863 Query: 67 NAAPIIVAYHFNSDLARLQ----------KAFPQGRTLDKDPCTIQEW-NEGKIPLLFAH 115 + ++ F S L ++ + + T+D ++ + ++ +L Sbjct: 864 STEKTLIFSQFTSLLDLVEVPLVQHKFRYQRYDGSMTMDARADAVEAFMHDPNETILLVS 923 Query: 116 PASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNT 175 + GLNL + + ++ +W+ +Q ++R + R V V+ ++ + Sbjct: 924 LKAGNAGLNL-WKASQVIMLDPFWNPFVEEQAVDR-----AHRMPQNREVHVHRVLVPES 977 Query: 176 IDELVLQRLRTKSTIQDLLLN 196 +++ + K I L+ Sbjct: 978 VEDRICALQDKKREIIGAALD 998 >gi|157114744|ref|XP_001652400.1| transcriptional regulator ATRX (X-linked helicase II) [Aedes aegypti] gi|108883553|gb|EAT47778.1| transcriptional regulator ATRX (X-linked helicase II) [Aedes aegypti] Length = 1445 Score = 80.4 bits (197), Expect = 1e-13, Method: Composition-based stats. Identities = 28/184 (15%), Positives = 62/184 (33%), Gaps = 45/184 (24%) Query: 52 HDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQK----------------------- 86 H K++ L I+++ A ++V L ++ Sbjct: 984 HSGKLQVLFEILKECEAIGDKLLVFSQSLYSLDVIEHFLSLVDDNTQKDDEERDSKLDKY 1043 Query: 87 -----------AFPQGRTLDKDPCTIQEWNEG---KIPLLFAHPASCGHGLNLQYGGNIL 132 ++ + +N+ + L + G G+NL N + Sbjct: 1044 QGSWTLGLDYFRLDGSTAIESRNAACKVFNDDSNHRARLFLISTRAGGLGINL-VAANRV 1102 Query: 133 VFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQD 192 + F + W+ Q I R+ + G + ++Y +A T++E + +R TK I Sbjct: 1103 IIFDVSWNPSHDIQSIFRV-----YRFGQIKPCYIYRFLAMGTMEEKIYERQVTKQAISK 1157 Query: 193 LLLN 196 +++ Sbjct: 1158 RVID 1161 >gi|324503939|gb|ADY41699.1| Chromodomain-helicase-DNA-binding protein 1-like protein [Ascaris suum] Length = 914 Score = 80.4 bits (197), Expect = 1e-13, Method: Composition-based stats. Identities = 26/167 (15%), Positives = 58/167 (34%), Gaps = 20/167 (11%) Query: 45 EKHWKEVHDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAFPQGR---------- 92 E K+ LE I+ + + +++ L +Q F R Sbjct: 314 EGEHLATSSGKMMLLERILGFLRKHKHRVLLFSQMTRMLDIVQDYFNYRRWSFERLDGKL 373 Query: 93 TLDKDPCTIQEWNEGKIPLL--FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 D I + + + + G GL L G + ++F ++ + Q R Sbjct: 374 KADMRFTAIDNFQKSDSDVFCFLLSTRAGGLGLTLT-GADTVIFIDSDFNPQNDIQAAAR 432 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + G + V + L+ +NT++E++ K + + ++ + Sbjct: 433 C-----HRIGQTKHVKIIRLVTKNTVEEVIECYATRKLRMTNRVMES 474 >gi|194384680|dbj|BAG59500.1| unnamed protein product [Homo sapiens] Length = 1014 Score = 80.4 bits (197), Expect = 1e-13, Method: Composition-based stats. Identities = 26/149 (17%), Positives = 52/149 (34%), Gaps = 18/149 (12%) Query: 66 ANAAPIIVAYHFNSDLARLQKAFPQGR-TLDK---------DPCTIQEWNEGKIP--LLF 113 A +++ L L+ Q R T ++ I + + + Sbjct: 775 AGGHKVLIFSQMVRCLDILEDYLIQRRYTYERIDGRVRGNLRQAAIDRFCKPDSDRFVFL 834 Query: 114 AHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQ 173 + G G+NL + + F WD + Q R + G +AV VY LI + Sbjct: 835 LCTRAGGLGINLT-AADTCIIFDSDWDPQNDLQAQARC-----HRIGQSKAVKVYRLITR 888 Query: 174 NTIDELVLQRLRTKSTIQDLLLNALKKET 202 N+ + + + K + +L + ++ Sbjct: 889 NSYEREMFDKASLKLGLDKAVLQDINRKG 917 >gi|310794269|gb|EFQ29730.1| SNF2 family domain-containing protein [Glomerella graminicola M1.001] Length = 1053 Score = 80.4 bits (197), Expect = 1e-13, Method: Composition-based stats. Identities = 25/150 (16%), Positives = 50/150 (33%), Gaps = 17/150 (11%) Query: 59 LEVIIEKANAAPIIVAYHFNSDLA----RLQKAFPQGRTLDKDPCTIQEW-------NEG 107 L + + I+ F+S L RL++A LD Q + Sbjct: 890 LHKLRSDNASHKSIIFSQFSSMLQLIEWRLRRAGITTVMLDGSMNPAQRQASINHFMTKT 949 Query: 108 KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFV 167 + G LNL + + WW+ Q +R + G R + Sbjct: 950 DCECFLVSLKAGGVALNLTEASRVFI-VDPWWNPAAEWQSADRC-----HRIGQTRPCTI 1003 Query: 168 YYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 L +++++ ++ K+ + + +NA Sbjct: 1004 TRLCIEDSVESRMVLIQEKKTNMINSTVNA 1033 >gi|307172263|gb|EFN63768.1| Chromodomain-helicase-DNA-binding protein 7 [Camponotus floridanus] Length = 4304 Score = 80.4 bits (197), Expect = 1e-13, Method: Composition-based stats. Identities = 19/124 (15%), Positives = 44/124 (35%), Gaps = 12/124 (9%) Query: 75 YHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVF 134 Y + R++ Q + + + G G+NL + ++ Sbjct: 2042 YPYERIDGRIRGNLRQAAIDRYSKPDSDRF------VFLLCTKAGGLGINLT-AADTVII 2094 Query: 135 FSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 + W+ + Q R + G ++ V VY L+ +NT + + + K + + Sbjct: 2095 YDSDWNPQNDLQAQARC-----HRIGQQKMVKVYRLLCRNTYEREMFDKASLKLGLDKAI 2149 Query: 195 LNAL 198 L ++ Sbjct: 2150 LQSM 2153 >gi|66813908|ref|XP_641133.1| myb domain-containing protein [Dictyostelium discoideum AX4] gi|60469158|gb|EAL67154.1| myb domain-containing protein [Dictyostelium discoideum AX4] Length = 2373 Score = 80.4 bits (197), Expect = 1e-13, Method: Composition-based stats. Identities = 25/146 (17%), Positives = 49/146 (33%), Gaps = 18/146 (12%) Query: 65 KANAAPIIVAYHFNSDLARLQKAF---------PQGRTLDKDPCT-IQEWNEGKIP--LL 112 K +++ S L L G D I +++ + Sbjct: 846 KLGNHKVLIFSQMVSVLDILDDYLTYRGYPHERIDGSIKGNDRQAAIDRFSKPDSDRFVF 905 Query: 113 FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIA 172 + G G+NL + ++ F W+ + Q R + G + V VY L+ Sbjct: 906 LLCTRAGGIGINLT-AADTVIIFDSDWNPQNDLQAQARC-----HRIGQDKMVKVYRLVT 959 Query: 173 QNTIDELVLQRLRTKSTIQDLLLNAL 198 +NT + L+ + K + +L + Sbjct: 960 KNTYERLMFDKASKKLGLDRAVLTKM 985 >gi|158288154|ref|XP_310015.4| AGAP009344-PA [Anopheles gambiae str. PEST] gi|157019247|gb|EAA05751.4| AGAP009344-PA [Anopheles gambiae str. PEST] Length = 961 Score = 80.4 bits (197), Expect = 1e-13, Method: Composition-based stats. Identities = 36/185 (19%), Positives = 64/185 (34%), Gaps = 45/185 (24%) Query: 51 VHDEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQKAFPQGRTLDKDPC--------- 99 K+ L I++ N +++ F S L ++ + +++P Sbjct: 676 FPSNKLWILFEILKHCNERGEKVLIFTAFVSVLNMVEHFMAKIHHQEENPQLSDAYAYSA 735 Query: 100 -------------------------TIQEWNEG---KIPLLFAHPASCGHGLNLQYGGNI 131 I +N+ + + G G+NL G N Sbjct: 736 FKGPWEPGKDYYRLDGKTQKSIRHQMITSFNDPQNKRTKCFLISAKAGGQGINLT-GANR 794 Query: 132 LVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQ 191 ++ W+ QQ I RI + G KR +VY LIA T++E V R TK + Sbjct: 795 VIILDTSWNPSNDQQNIFRIF-----RLGQKRKCYVYRLIAAGTMEEKVYSRSVTKQALS 849 Query: 192 DLLLN 196 +++ Sbjct: 850 FRVVD 854 >gi|47227437|emb|CAG04585.1| unnamed protein product [Tetraodon nigroviridis] Length = 2248 Score = 80.4 bits (197), Expect = 1e-13, Method: Composition-based stats. Identities = 28/181 (15%), Positives = 54/181 (29%), Gaps = 36/181 (19%) Query: 45 EKHWKEVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQ----------KAFPQGR 92 E K+ L+ ++ K ++V L L+ + G Sbjct: 967 EGSALTKASGKLMLLQKMLRKLKEQGHRVLVFSQMTKMLDLLEDFLDHEGYKYERIDGGI 1026 Query: 93 TLDKDPCTIQEWNE-GKIPL-LFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMI-- 148 T I +N G + G G+NL + ++ F W+ Q+ Sbjct: 1027 TGALRQEAIDRFNAPGACQFCFLLSTRAGGLGINL-ATADTVIIFDSDWNPHNDIQVAVG 1085 Query: 149 ------ERIGVT-------------RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKST 189 R G R + G V +Y + + +++E + Q + K Sbjct: 1086 SAGRGAARCGADLNRRPSLPAQAFSRAHRIGQANKVMIYRFVTRASVEERITQVAKRKMM 1145 Query: 190 I 190 + Sbjct: 1146 L 1146 >gi|198458067|ref|XP_002138492.1| GA24365 [Drosophila pseudoobscura pseudoobscura] gi|198136210|gb|EDY69050.1| GA24365 [Drosophila pseudoobscura pseudoobscura] Length = 1651 Score = 80.4 bits (197), Expect = 1e-13, Method: Composition-based stats. Identities = 19/102 (18%), Positives = 43/102 (42%), Gaps = 7/102 (6%) Query: 96 KDPCTIQEWNEG-KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 + + E+N ++ L + G+NL G N ++ F W+ Q + RI Sbjct: 990 ERERLVNEFNANSQVKLFLISTRAGSLGINLT-GANRVIIFDASWNPCHDTQAVYRI--- 1045 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + G + +VY ++ +++ + R K + D +++ Sbjct: 1046 --YRYGQTKPCYVYRIVMDKCLEKKIYDRQIKKQGMSDRIVD 1085 >gi|195151315|ref|XP_002016593.1| GL10420 [Drosophila persimilis] gi|194110440|gb|EDW32483.1| GL10420 [Drosophila persimilis] Length = 1641 Score = 80.4 bits (197), Expect = 1e-13, Method: Composition-based stats. Identities = 19/102 (18%), Positives = 43/102 (42%), Gaps = 7/102 (6%) Query: 96 KDPCTIQEWNEG-KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 + + E+N ++ L + G+NL G N ++ F W+ Q + RI Sbjct: 990 ERERLVNEFNANSQVKLFLISTRAGSLGINLT-GANRVIIFDASWNPCHDTQAVYRI--- 1045 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + G + +VY ++ +++ + R K + D +++ Sbjct: 1046 --YRYGQTKPCYVYRIVMDKCLEKKIYDRQIKKQGMSDRIVD 1085 >gi|73985397|ref|XP_860617.1| PREDICTED: similar to KIAA0809 protein isoform 2 [Canis familiaris] Length = 1056 Score = 80.4 bits (197), Expect = 1e-13, Method: Composition-based stats. Identities = 36/178 (20%), Positives = 66/178 (37%), Gaps = 37/178 (20%) Query: 52 HDEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQKAFPQGRTL---DKDPCTIQEW-- 104 + K+ L +IE++ I+V S LA +++ + D +Q+W Sbjct: 310 NSPKMVLLFHLIEESVKLGDKILVFSQSLSTLALIEEFLGKREVPCLPGADGQGVQKWVR 369 Query: 105 N----EGKIP--------------------LLFAHPASCGHGLNLQYGGNILVFFSLWWD 140 N G P L + G+NL G N +V F W+ Sbjct: 370 NVSYFHGSTPAFERERLINQFNDPSNLTTWLFLLSTRAGCLGVNL-IGANRVVVFDASWN 428 Query: 141 LEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNAL 198 Q + R + G K+ +Y L+A T+++ + R +K + D +++ L Sbjct: 429 PCHDAQAV-----CRVYRYGQKKPCHIYRLVADFTLEKKIYDRQISKQGMSDRVVDDL 481 >gi|324502582|gb|ADY41136.1| Chromodomain-helicase-DNA-binding protein 1-like protein [Ascaris suum] Length = 1035 Score = 80.4 bits (197), Expect = 1e-13, Method: Composition-based stats. Identities = 26/167 (15%), Positives = 58/167 (34%), Gaps = 20/167 (11%) Query: 45 EKHWKEVHDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAFPQGR---------- 92 E K+ LE I+ + + +++ L +Q F R Sbjct: 314 EGEHLATSSGKMMLLERILGFLRKHKHRVLLFSQMTRMLDIVQDYFNYRRWSFERLDGKL 373 Query: 93 TLDKDPCTIQEWNEGKIPLL--FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 D I + + + + G GL L G + ++F ++ + Q R Sbjct: 374 KADMRFTAIDNFQKSDSDVFCFLLSTRAGGLGLTLT-GADTVIFIDSDFNPQNDIQAAAR 432 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + G + V + L+ +NT++E++ K + + ++ + Sbjct: 433 C-----HRIGQTKHVKIIRLVTKNTVEEVIECYATRKLRMTNRVMES 474 >gi|198453636|ref|XP_001359276.2| GA18064 [Drosophila pseudoobscura pseudoobscura] gi|198132447|gb|EAL28421.2| GA18064 [Drosophila pseudoobscura pseudoobscura] Length = 1958 Score = 80.4 bits (197), Expect = 1e-13, Method: Composition-based stats. Identities = 34/187 (18%), Positives = 71/187 (37%), Gaps = 34/187 (18%) Query: 34 QLANGAVYYDEEKHWKEVHDEKIKALEVII---------EKANAAPIIVAYHFNSDLARL 84 QLA D+ +H K+ AL+ ++ E + ++ + L + Sbjct: 1710 QLALSNSCLDDIEH-----SAKLPALKQLLLDCGIGVQTESVSQHRALIFCQLKAMLDIV 1764 Query: 85 QK-------------AFPQGRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGN 130 + + + +N + I +L G GLNL G + Sbjct: 1765 EHDLLRRHLPSVTYLRLDGSVPASQRQDIVNNFNSDPSIDVLLLTTLVGGLGLNLT-GAD 1823 Query: 131 ILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 ++F W+ + Q ++R + G K+ V VY LI +N+++E ++ + K Sbjct: 1824 TVIFVEHDWNPMKDLQAMDR-----AHRIGQKKVVNVYRLITRNSLEEKIMGLQKFKILT 1878 Query: 191 QDLLLNA 197 + +++A Sbjct: 1879 ANTVVSA 1885 >gi|149030549|gb|EDL85586.1| chromodomain helicase DNA binding protein 1-like (predicted) [Rattus norvegicus] Length = 530 Score = 80.4 bits (197), Expect = 1e-13, Method: Composition-based stats. Identities = 22/130 (16%), Positives = 52/130 (40%), Gaps = 16/130 (12%) Query: 78 NSDLARLQKAFP---------QGRTLDKDPC-TIQEWNEGKIPLLFAHPASCGHGLNLQY 127 L LQ G ++ I+ + + I + + G G+NL Sbjct: 2 THMLDILQDYMDYRGYSYERVDGSVRGEERHLAIKNFGKQPIFVFLLSTRAGGVGMNLT- 60 Query: 128 GGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTK 187 + ++F ++ + Q R + G ++V V LI ++T++E+V ++ +K Sbjct: 61 AADTVIFVDSDFNPQNDLQAAAR-----AHRIGQNKSVKVIRLIGRDTVEEIVYRKAASK 115 Query: 188 STIQDLLLNA 197 + ++++ Sbjct: 116 LQLTNMVIEG 125 >gi|45357056|gb|AAS58484.1| SNF2P [Triticum monococcum] Length = 882 Score = 80.4 bits (197), Expect = 1e-13, Method: Composition-based stats. Identities = 31/175 (17%), Positives = 68/175 (38%), Gaps = 32/175 (18%) Query: 42 YDEEKHWKEVHDEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQ----------KAFP 89 Y+E +H + K+ L++++EK + +++ L LQ + Sbjct: 354 YEEGEHLVQ-ASGKLIVLDLVLEKLHRLGHRVVLFAQMTQTLDILQDFLELRNYTYERLD 412 Query: 90 QGRTLDKDPCTIQEW-------------NEGKIPLLFAHPASCGHGLNLQYGGNILVFFS 136 ++ I+ + N + + G GLNL G + ++F+ Sbjct: 413 GSVRAEERFAAIRNFSSQPTKGVVRDDSNPSGAFVFMISTRAGGVGLNL-IGADTVIFYE 471 Query: 137 LWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQ 191 W+ + +Q ++R + G V L++Q TI+E++++R K + Sbjct: 472 QDWNPQADKQALQR-----THRIGQLNHVLSINLVSQRTIEEVIMRRAERKLKLS 521 >gi|145515018|ref|XP_001443414.1| hypothetical protein [Paramecium tetraurelia strain d4-2] gi|124410792|emb|CAK76017.1| unnamed protein product [Paramecium tetraurelia] Length = 1024 Score = 80.4 bits (197), Expect = 2e-13, Method: Composition-based stats. Identities = 39/218 (17%), Positives = 79/218 (36%), Gaps = 28/218 (12%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSA--SKTVKCLQLANGA----VYYDEEKHWKEV--HD 53 K Y + + ++ ++ + A + ++ ++ N + D + E+ Sbjct: 615 KIYDQINQRGVMTFDQQSGKSGSQALQNLMMQLRKICNHPYLFMLNLDMNRVTDEIWRSS 674 Query: 54 EKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQKAFP---------QGRTLDKDPCT-I 101 K + L+ II K +++ + ++ F G T +D + I Sbjct: 675 GKFELLDRIIPKLLYFKHRLLIFSQMTQLMDIMEAFFEYRGWRYLRLDGSTKSEDRESRI 734 Query: 102 QEWNEGK--IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQA 159 Q +N+ + + G GLNLQ + +V F W+ Q R + Sbjct: 735 QLFNQENSIYNIFLLSTRAGGLGLNLQ-SADTVVLFDSDWNPMMDLQA-----QDRAYRI 788 Query: 160 GFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 G K V V LI I+ +L + K + +++ A Sbjct: 789 GQKNEVRVLRLITATQIEGNILSKAEHKMGLDAVIIQA 826 >gi|325120874|emb|CBZ56429.1| putative SNF2 family N-terminal domain-containing protein [Neospora caninum Liverpool] Length = 791 Score = 80.4 bits (197), Expect = 2e-13, Method: Composition-based stats. Identities = 33/150 (22%), Positives = 65/150 (43%), Gaps = 18/150 (12%) Query: 59 LEVIIEKANAAPIIVAYHFNSDLARLQKAFPQ------GRTLDKDPCTIQEWNEGKIPLL 112 L + + +IV H + L +++ Q R + P + + + Sbjct: 499 LSYLFKSGGDMKVIVFAHHRAVLDYIEEYLQQTEKKQSVRIDGRTPQDKR-----ERLVA 553 Query: 113 FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFK-RAVFVYYLI 171 +CGHGLNL G ++F L+W + Q +R + G + ++ ++YLI Sbjct: 554 LLSITACGHGLNLTAAG-TVIFAELYWVPGQMIQAEDR-----SHRIGTEFSSIQIHYLI 607 Query: 172 AQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 A+ T+DE V + L+ K + L+ +++ Sbjct: 608 AEGTLDETVFRILQRKWRLMTCTLDGEQQQ 637 >gi|290980924|ref|XP_002673181.1| predicted protein [Naegleria gruberi] gi|284086763|gb|EFC40437.1| predicted protein [Naegleria gruberi] Length = 1101 Score = 80.4 bits (197), Expect = 2e-13, Method: Composition-based stats. Identities = 34/211 (16%), Positives = 70/211 (33%), Gaps = 29/211 (13%) Query: 1 MKQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVY----YDEEKHWKEV--HDE 54 ++ Y +F + D+ E+ + + Q+ + K+ KE+ Sbjct: 519 LELYREFLKS--EDVHEVIHESTSPLAAITILKQICCHPDLLPKVQKKSKNIKEMIAMSG 576 Query: 55 KIKALEVIIEKA--NAAPIIVAYHFNSDLARLQKAFP---------QGRTLDKDPCT--I 101 K+ L ++++ ++ + L + G D + Sbjct: 577 KMIFLRKLVQQLYEEDEKCLIFSQSSKMLDMIASMLKYINISYTRIDGTINDTKERQRRV 636 Query: 102 QEWNEGKIPLL--FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQA 159 +N P + GL L ++ F W+ + Q +R + Sbjct: 637 DSFNSENSPYFCFLLTSQTGSVGLTLT-AATRVILFDPSWNPTQDNQAADRC-----YRI 690 Query: 160 GFKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 G + V VY LI+ +TI+E V ++ K I Sbjct: 691 GQLKDVVVYRLISCSTIEEKVYRKQVFKDAI 721 >gi|229828149|ref|ZP_04454218.1| hypothetical protein GCWU000342_00206 [Shuttleworthia satelles DSM 14600] gi|229792743|gb|EEP28857.1| hypothetical protein GCWU000342_00206 [Shuttleworthia satelles DSM 14600] Length = 758 Score = 80.4 bits (197), Expect = 2e-13, Method: Composition-based stats. Identities = 31/158 (19%), Positives = 57/158 (36%), Gaps = 17/158 (10%) Query: 46 KHWKEVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQKAFPQ--------GRTLD 95 + + K L I A ++V F L+++QK + Sbjct: 549 QTRQADQSAKGIRLLEICRAAAEEGRKVLVFSFFLDTLSKVQKLLGDQCLPLITGSVNAE 608 Query: 96 KDPCTIQEWNEGKI-PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 I + + + +L + G GLN+Q ++++F +Q I R Sbjct: 609 TRQNIIDRFRDARPGSVLACQIQAGGTGLNIQ-AASVIIFCEPQIKPSLQEQAIGR---- 663 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQD 192 + G R V V +L+ + T+DE + L K I + Sbjct: 664 -AYRMGQVRNVLVRHLLCEGTVDERIRDLLERKRDIFE 700 >gi|168029897|ref|XP_001767461.1| predicted protein [Physcomitrella patens subsp. patens] gi|162681357|gb|EDQ67785.1| predicted protein [Physcomitrella patens subsp. patens] Length = 1569 Score = 80.4 bits (197), Expect = 2e-13, Method: Composition-based stats. Identities = 25/176 (14%), Positives = 63/176 (35%), Gaps = 24/176 (13%) Query: 37 NGAVYYDEEKHWK--EVHDEKIKALEVIIEKANA--APIIVAYHFNSDLARLQKAF---- 88 G ++ + + K+ L+ ++ + +++ L L Sbjct: 693 GGDANMNDNNKVQRIVLSSGKLAILDKLLIRLKETNHRVLIFSQMVKMLDILADYMSLRG 752 Query: 89 -----PQGRTL-DKDPCTIQEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWD 140 G T D ++ +N + + G G+NL + ++ F W+ Sbjct: 753 FQFQRLDGSTRSDLRHQAMEHFNAPGSEDFCFLLSTRAGGLGINL-ATADTVIIFDSDWN 811 Query: 141 LEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + Q + R + G + V +Y + +++E +L+R + K + + +L+ Sbjct: 812 PQNDLQAMSR-----AHRIGQRDVVNIYRFVISRSVEEDILERAKKK--MANRVLD 860 >gi|148910874|gb|ABR18490.1| SNF2P [Triticum turgidum] Length = 878 Score = 80.4 bits (197), Expect = 2e-13, Method: Composition-based stats. Identities = 31/175 (17%), Positives = 68/175 (38%), Gaps = 32/175 (18%) Query: 42 YDEEKHWKEVHDEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQ----------KAFP 89 Y+E +H + K+ L++++EK + +++ L LQ + Sbjct: 354 YEEGEHLVQ-ASGKLIVLDLVLEKLHRLGHRVVLFAQMTQTLDILQDFLELRNYTYERLD 412 Query: 90 QGRTLDKDPCTIQEW-------------NEGKIPLLFAHPASCGHGLNLQYGGNILVFFS 136 ++ I+ + N + + G GLNL G + ++F+ Sbjct: 413 GSVRAEERFAAIRNFSSQPTKGVVRDDSNPSGAFVFMISTRAGGVGLNL-IGADTVIFYE 471 Query: 137 LWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQ 191 W+ + +Q ++R + G V L++Q TI+E++++R K + Sbjct: 472 QDWNPQADKQALQR-----THRIGQLNHVLSINLVSQRTIEEVIMRRAERKLKLS 521 >gi|255078968|ref|XP_002503064.1| SNF2 super family [Micromonas sp. RCC299] gi|226518330|gb|ACO64322.1| SNF2 super family [Micromonas sp. RCC299] Length = 1866 Score = 80.4 bits (197), Expect = 2e-13, Method: Composition-based stats. Identities = 33/180 (18%), Positives = 67/180 (37%), Gaps = 26/180 (14%) Query: 44 EEKHWKEVHDEKIKALEV----IIEKANAAPIIVAYHFNSDLARLQKAFPQGR------- 92 EE + K++AL + ++ + ++ FNS L+ LQ+ P+ Sbjct: 1647 EEVRVVLNSESKLQALVTELRKMRDEDGSNKALIFSQFNSTLSWLQERLPEEGFGFRTIS 1706 Query: 93 ---TLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMI 148 L + IQ + + + S G+NL + + ++ +Q I Sbjct: 1707 GSMPLKQRDQAIQAFQKDPPTTVFLLSMRSGAVGINLTSATH-VFLVEPAFNPALTEQAI 1765 Query: 149 ERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTI-----QDLLLNALKKETI 203 R + G +R V V +LI N+I+ + + L + ++ A K+ + Sbjct: 1766 GRSW-----RMGQRREVRVKHLIVANSIESNIRKLLAAREETKPEDEAADVIEAEKQRGM 1820 >gi|222637530|gb|EEE67662.1| hypothetical protein OsJ_25277 [Oryza sativa Japonica Group] Length = 716 Score = 80.4 bits (197), Expect = 2e-13, Method: Composition-based stats. Identities = 29/158 (18%), Positives = 58/158 (36%), Gaps = 19/158 (12%) Query: 54 EKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTL-----------DKDPCTIQ 102 + L IIE ++ H S L + + + + + Sbjct: 525 AVLDYLGTIIEA--ECKFLIFAHHQSMLEAIHQHLLKKKVKCIRIDGQTPVPVRQTLVTD 582 Query: 103 EWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFK 162 N+ I + G GL L + ++F L W + Q +R + G Sbjct: 583 FQNKDDIKAAVLSIKAGGVGLTLT-AASTVIFAELSWTPGDLIQAEDR-----AHRIGQV 636 Query: 163 RAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKK 200 +V +YYL+A +T+D+++ ++ K +L+ +K Sbjct: 637 SSVNIYYLLANDTVDDIIWDVVQGKLENLGQMLDGQEK 674 >gi|307136401|gb|ADN34210.1| chromatin remodeling complex subunit [Cucumis melo subsp. melo] Length = 2374 Score = 80.4 bits (197), Expect = 2e-13, Method: Composition-based stats. Identities = 25/160 (15%), Positives = 59/160 (36%), Gaps = 21/160 (13%) Query: 52 HDEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQ------------KAFPQGRTLDKD 97 K+ L +++ + +++ L L+ + ++ Sbjct: 1117 ASAKLTLLHSMLKILHKEGHRVLLFSQMTKLLDILEDYLTIEFGPKTYERVDGSVSVADR 1176 Query: 98 PCTIQEWNEGKIP-LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 I +N+ K + SCG G+NL + ++ + ++ Q + R Sbjct: 1177 QAAITRFNQDKSRFVFLLSTRSCGLGINL-ATADTVIIYDSDFNPHADIQAMNR-----A 1230 Query: 157 RQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + G + VY L+ + +++E +LQ + K + L +N Sbjct: 1231 HRIGQSNRLLVYRLVVRASVEERILQLAKKKLMLDQLFVN 1270 >gi|301767248|ref|XP_002919008.1| PREDICTED: helicase ARIP4-like [Ailuropoda melanoleuca] Length = 1465 Score = 80.0 bits (196), Expect = 2e-13, Method: Composition-based stats. Identities = 36/180 (20%), Positives = 67/180 (37%), Gaps = 39/180 (21%) Query: 52 HDEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQKAFPQGRTL---DKDPCTIQEW-- 104 + K+ L +IE++ I+V S LA +++ + D +Q+W Sbjct: 717 NSPKMVLLFHLIEESVKLGDKILVFSQSLSTLALIEEFLGKREVPCLPGADGQGVQKWVR 776 Query: 105 N------EGKIP--------------------LLFAHPASCGHGLNLQYGGNILVFFSLW 138 N +G P L + G+NL G N +V F Sbjct: 777 NVSYFRLDGSTPAFERERLINQFNDPSNLTTWLFLLSTRAGCLGVNL-IGANRVVVFDAS 835 Query: 139 WDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNAL 198 W+ Q + R + G K+ +Y L+A T+++ + R +K + D +++ L Sbjct: 836 WNPCHDAQAV-----CRVYRYGQKKPCHIYRLVADFTLEKKIYDRQISKQGMSDRVVDDL 890 >gi|281338061|gb|EFB13645.1| hypothetical protein PANDA_007611 [Ailuropoda melanoleuca] Length = 1424 Score = 80.0 bits (196), Expect = 2e-13, Method: Composition-based stats. Identities = 36/180 (20%), Positives = 67/180 (37%), Gaps = 39/180 (21%) Query: 52 HDEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQKAFPQGRTL---DKDPCTIQEW-- 104 + K+ L +IE++ I+V S LA +++ + D +Q+W Sbjct: 676 NSPKMVLLFHLIEESVKLGDKILVFSQSLSTLALIEEFLGKREVPCLPGADGQGVQKWVR 735 Query: 105 N------EGKIP--------------------LLFAHPASCGHGLNLQYGGNILVFFSLW 138 N +G P L + G+NL G N +V F Sbjct: 736 NVSYFRLDGSTPAFERERLINQFNDPSNLTTWLFLLSTRAGCLGVNL-IGANRVVVFDAS 794 Query: 139 WDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNAL 198 W+ Q + R + G K+ +Y L+A T+++ + R +K + D +++ L Sbjct: 795 WNPCHDAQAV-----CRVYRYGQKKPCHIYRLVADFTLEKKIYDRQISKQGMSDRVVDDL 849 >gi|145341798|ref|XP_001415990.1| predicted protein [Ostreococcus lucimarinus CCE9901] gi|144576213|gb|ABO94282.1| predicted protein [Ostreococcus lucimarinus CCE9901] Length = 663 Score = 80.0 bits (196), Expect = 2e-13, Method: Composition-based stats. Identities = 35/210 (16%), Positives = 69/210 (32%), Gaps = 27/210 (12%) Query: 13 CDLQGENIEAFNSASKTVKCLQL------ANGAVYYDEEKHWKEVHDE-KIKALEVIIE- 64 CD + N + KC Q A+ + V K++ L+ ++ Sbjct: 457 CDSRESFANFANIMMEVRKCCQHPFLLDGVEAAIAPEGASTTALVSSAGKLQLLDKLLPH 516 Query: 65 -KANAAPIIVAYHFNSDLARLQK----------AFPQGRTLDKDPCTIQEW--NEGKIPL 111 + ++ L L+ T I ++ + L Sbjct: 517 LREGGHRALIFSQMTRVLDVLEDYCRARGHSYVRLDGSITGKARQEAIDKYCAEDSDTFL 576 Query: 112 LFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLI 171 + G G+NL + +V F W+ + Q + R + G R V VY L+ Sbjct: 577 FLLSTRAGGQGINLVQ-ADTVVMFDSDWNPQNDAQALAR-----AHRIGQTRQVQVYRLV 630 Query: 172 AQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 + T ++ + R K ++ + + +KE Sbjct: 631 MRATYEKEMFTRASMKLGLEQAIFGSAEKE 660 >gi|121713498|ref|XP_001274360.1| DNA repair helicase rad5,16 [Aspergillus clavatus NRRL 1] gi|119402513|gb|EAW12934.1| DNA repair helicase rad5,16 [Aspergillus clavatus NRRL 1] Length = 1174 Score = 80.0 bits (196), Expect = 2e-13, Method: Composition-based stats. Identities = 37/195 (18%), Positives = 78/195 (40%), Gaps = 31/195 (15%) Query: 33 LQLANGAVYYDEEKHWK-----EVHDEKIKALEVII----EKANAAPIIVAYHFNSDLAR 83 L+ + + D++ W E+ K+ + +I E+ +++ + D R Sbjct: 954 LRFNSSSFDKDQDTDWISACGGEMPSAKLTKIRELIQNWIEENPEVKVVIF-TLSLDFVR 1012 Query: 84 L-----------QKAFPQGRTLDKDPCTIQEW-NEGKIPLLFAHPASCGHGLNLQYGGNI 131 + AF + +++E+ + +L A + G GL++ N Sbjct: 1013 IATMMCEREGWQCYAFTGKMPIPAREQSMKEFRENPEAKVLVASLKAGGIGLDMTM-ANK 1071 Query: 132 LVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQ 191 + LWW+ H+Q R+ + G ++ V + LI ++TIDE + Q K+ Sbjct: 1072 CILVDLWWNEAIHEQAFCRL-----YRIGQQKEVEIVILIVRDTIDEYICQLQLKKTAEI 1126 Query: 192 DLLL---NALKKETI 203 + + K++TI Sbjct: 1127 NSAMGEEELSKRDTI 1141 >gi|73985395|ref|XP_533811.2| PREDICTED: similar to steroid receptor-interacting SNF2 domain protein isoform 1 [Canis familiaris] Length = 1467 Score = 80.0 bits (196), Expect = 2e-13, Method: Composition-based stats. Identities = 36/180 (20%), Positives = 67/180 (37%), Gaps = 39/180 (21%) Query: 52 HDEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQKAFPQGRTL---DKDPCTIQEW-- 104 + K+ L +IE++ I+V S LA +++ + D +Q+W Sbjct: 719 NSPKMVLLFHLIEESVKLGDKILVFSQSLSTLALIEEFLGKREVPCLPGADGQGVQKWVR 778 Query: 105 N------EGKIP--------------------LLFAHPASCGHGLNLQYGGNILVFFSLW 138 N +G P L + G+NL G N +V F Sbjct: 779 NVSYFRLDGSTPAFERERLINQFNDPSNLTTWLFLLSTRAGCLGVNL-IGANRVVVFDAS 837 Query: 139 WDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNAL 198 W+ Q + R + G K+ +Y L+A T+++ + R +K + D +++ L Sbjct: 838 WNPCHDAQAV-----CRVYRYGQKKPCHIYRLVADFTLEKKIYDRQISKQGMSDRVVDDL 892 >gi|73985399|ref|XP_860644.1| PREDICTED: similar to steroid receptor-interacting SNF2 domain protein isoform 3 [Canis familiaris] Length = 1395 Score = 80.0 bits (196), Expect = 2e-13, Method: Composition-based stats. Identities = 36/180 (20%), Positives = 67/180 (37%), Gaps = 39/180 (21%) Query: 52 HDEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQKAFPQGRTL---DKDPCTIQEW-- 104 + K+ L +IE++ I+V S LA +++ + D +Q+W Sbjct: 647 NSPKMVLLFHLIEESVKLGDKILVFSQSLSTLALIEEFLGKREVPCLPGADGQGVQKWVR 706 Query: 105 N------EGKIP--------------------LLFAHPASCGHGLNLQYGGNILVFFSLW 138 N +G P L + G+NL G N +V F Sbjct: 707 NVSYFRLDGSTPAFERERLINQFNDPSNLTTWLFLLSTRAGCLGVNL-IGANRVVVFDAS 765 Query: 139 WDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNAL 198 W+ Q + R + G K+ +Y L+A T+++ + R +K + D +++ L Sbjct: 766 WNPCHDAQAV-----CRVYRYGQKKPCHIYRLVADFTLEKKIYDRQISKQGMSDRVVDDL 820 >gi|302816250|ref|XP_002989804.1| hypothetical protein SELMODRAFT_428350 [Selaginella moellendorffii] gi|300142370|gb|EFJ09071.1| hypothetical protein SELMODRAFT_428350 [Selaginella moellendorffii] Length = 2150 Score = 80.0 bits (196), Expect = 2e-13, Method: Composition-based stats. Identities = 22/157 (14%), Positives = 56/157 (35%), Gaps = 21/157 (13%) Query: 52 HDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQ------------KAFPQGRTLDKD 97 K+ L ++ +++ L L+ + + + Sbjct: 1003 ASAKLTLLHSMLGSLKKEGHRVLIFSQMTKLLDILEDYLTFEFGHDSYERVDGSVPVAER 1062 Query: 98 PCTIQEWNEGKIP-LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 I+ +N+ + SCG G+NL + ++ + ++ Q + R Sbjct: 1063 QAAIRRYNKDTSRFVFLLSTRSCGLGINL-ATADTVIIYDSDFNPHADIQAMNR-----A 1116 Query: 157 RQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDL 193 + G + + VY L+ + +++E +L + K ++ L Sbjct: 1117 HRIGQSKKLLVYRLLVRGSVEERILHLAKKKLELEQL 1153 >gi|296225327|ref|XP_002758442.1| PREDICTED: helicase ARIP4 [Callithrix jacchus] Length = 1467 Score = 80.0 bits (196), Expect = 2e-13, Method: Composition-based stats. Identities = 32/180 (17%), Positives = 65/180 (36%), Gaps = 39/180 (21%) Query: 52 HDEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQKAFPQGRTLD-------------- 95 + K+ L +IE++ I+V S LA +++ + Sbjct: 719 NSPKMVLLFHLIEESVKLGDKILVFSQSLSTLALIEEFLGKREVPSPPGAEGQGAQKWVR 778 Query: 96 --------------KDPCTIQEWNEGKIP---LLFAHPASCGHGLNLQYGGNILVFFSLW 138 + I ++N+ L + G+NL G N +V F Sbjct: 779 NVSYFRLDGSTPAFERERLINQFNDPSNLTTWLFLLSTRAGCLGVNL-IGANRVVVFDAS 837 Query: 139 WDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNAL 198 W+ Q + R + G K+ ++Y L+A T+++ + R +K + D +++ L Sbjct: 838 WNPCHDAQAV-----CRVYRYGQKKPCYIYRLVADYTLEKKIYDRQISKQGMSDRVVDDL 892 >gi|222637088|gb|EEE67220.1| hypothetical protein OsJ_24338 [Oryza sativa Japonica Group] Length = 2258 Score = 80.0 bits (196), Expect = 2e-13, Method: Composition-based stats. Identities = 24/160 (15%), Positives = 59/160 (36%), Gaps = 21/160 (13%) Query: 52 HDEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQ------------KAFPQGRTLDKD 97 K+ L +++ + +++ L L+ + ++ + Sbjct: 986 ASAKLTLLHSMLKILHKDGHRVLIFSQMTKLLDILEDYLTWEFGPKTFERVDGSVSVAER 1045 Query: 98 PCTIQEWNEGKIP-LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 I +N+ K + SCG G+NL + ++ + ++ Q + R Sbjct: 1046 QAAIARFNQDKSRFVFLLSTRSCGLGINL-ATADTVIIYDSDFNPHADIQAMNR-----A 1099 Query: 157 RQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + G + VY L+ + +++E +L + K + L +N Sbjct: 1100 HRIGQSNRLLVYRLVVRASVEERILHLAKKKLMLDQLFVN 1139 >gi|218199663|gb|EEC82090.1| hypothetical protein OsI_26092 [Oryza sativa Indica Group] Length = 2275 Score = 80.0 bits (196), Expect = 2e-13, Method: Composition-based stats. Identities = 24/160 (15%), Positives = 59/160 (36%), Gaps = 21/160 (13%) Query: 52 HDEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQ------------KAFPQGRTLDKD 97 K+ L +++ + +++ L L+ + ++ + Sbjct: 1003 ASAKLTLLHSMLKILHKDGHRVLIFSQMTKLLDILEDYLTWEFGPKTFERVDGSVSVAER 1062 Query: 98 PCTIQEWNEGKIP-LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 I +N+ K + SCG G+NL + ++ + ++ Q + R Sbjct: 1063 QAAIARFNQDKSRFVFLLSTRSCGLGINL-ATADTVIIYDSDFNPHADIQAMNR-----A 1116 Query: 157 RQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + G + VY L+ + +++E +L + K + L +N Sbjct: 1117 HRIGQSNRLLVYRLVVRASVEERILHLAKKKLMLDQLFVN 1156 >gi|121716002|ref|XP_001275610.1| SNF2 family helicase/ATPase, putative [Aspergillus clavatus NRRL 1] gi|119403767|gb|EAW14184.1| SNF2 family helicase/ATPase, putative [Aspergillus clavatus NRRL 1] Length = 1179 Score = 80.0 bits (196), Expect = 2e-13, Method: Composition-based stats. Identities = 33/172 (19%), Positives = 64/172 (37%), Gaps = 28/172 (16%) Query: 50 EVHDEKIKAL-EVIIEKANAAPII---------VAYHFNSDLARLQKAFPQGR------- 92 E K KAL ++E A + + V + S L ++ A Sbjct: 995 EGPHTKTKALLAHLMESAEESKRLGSELPIKSVVFSAWTSHLDLIEIALKDNGITGYTRL 1054 Query: 93 ----TLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQM 147 TL +++++ + +L A + G GLNL + + ++ Q Sbjct: 1055 DGSMTLPARNRALEDFHSNNETTILLATIGAGGVGLNLTSASKVYIM-EPQYNPAAVAQA 1113 Query: 148 IERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 I+R+ + G R V I + +I+E + + + K + D+ +N K Sbjct: 1114 IDRV-----HRLGQTRDVTTVQFIMKGSIEEKIFELAKRKQQLADMSMNRGK 1160 >gi|238496787|ref|XP_002379629.1| SNF2 family helicase/ATPase, putative [Aspergillus flavus NRRL3357] gi|220694509|gb|EED50853.1| SNF2 family helicase/ATPase, putative [Aspergillus flavus NRRL3357] Length = 1117 Score = 80.0 bits (196), Expect = 2e-13, Method: Composition-based stats. Identities = 35/178 (19%), Positives = 68/178 (38%), Gaps = 28/178 (15%) Query: 50 EVHDEKIKALE----VIIEKANA----API--IVAYHFNSDLARLQKAFPQGR------- 92 E K KAL ++++ PI +V + S L ++ A Sbjct: 933 EGPHTKTKALIAYLLETMDESKGLTDERPIKSVVFSAWTSHLDLIEIALKDNGITGFTRL 992 Query: 93 ----TLDKDPCTIQEW-NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQM 147 TL +QE+ + I +L A + G GLNL + + ++ Q Sbjct: 993 DGTMTLSARQKALQEFHDNNDITILLATIGAGGVGLNLTSASRVYIM-EPQYNPAAVAQA 1051 Query: 148 IERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIHV 205 ++R+ + G R V + +++I+E + + + K + D+ +N K + V Sbjct: 1052 VDRV-----HRIGQTREVTTVQFLMKDSIEEKIFELAKKKQQLADMSMNQRKLDKREV 1104 >gi|145494324|ref|XP_001433156.1| hypothetical protein [Paramecium tetraurelia strain d4-2] gi|124400273|emb|CAK65759.1| unnamed protein product [Paramecium tetraurelia] Length = 1030 Score = 80.0 bits (196), Expect = 2e-13, Method: Composition-based stats. Identities = 39/218 (17%), Positives = 79/218 (36%), Gaps = 28/218 (12%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSA--SKTVKCLQLANGA----VYYDEEKHWKEV--HD 53 K Y + + ++ ++ + A + ++ ++ N + D + E+ Sbjct: 618 KIYDQINQRGVMTFDQQSGKSGSQALQNLMMQLRKICNHPYLFMLNLDMNRITDEIWRSS 677 Query: 54 EKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQKAFP---------QGRTLDKDPCT-I 101 K + L+ II K +++ + ++ F G T +D T I Sbjct: 678 GKFELLDRIIPKLLYFKHRLLIFSQMTQLMDIMEAYFEYRGWRYLRLDGSTKSEDRETRI 737 Query: 102 QEWNEGK--IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQA 159 + +N+ + + G GLNLQ + +V F W+ Q R + Sbjct: 738 KLFNQENSIYNIFLLSTRAGGLGLNLQ-SADTVVLFDSDWNPMMDLQA-----QDRAYRI 791 Query: 160 GFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 G K V V LI I+ +L + K + +++ A Sbjct: 792 GQKNEVRVLRLITATQIEGNILSKAEHKMGLDAIIIQA 829 >gi|215254414|gb|ACJ64199.1| SNF2P [Triticum turgidum] Length = 882 Score = 80.0 bits (196), Expect = 2e-13, Method: Composition-based stats. Identities = 31/180 (17%), Positives = 69/180 (38%), Gaps = 32/180 (17%) Query: 42 YDEEKHWKEVHDEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQ----------KAFP 89 Y+E +H + K+ L++++EK + +++ L LQ + Sbjct: 354 YEEGEHLVQ-ASGKLIVLDLVLEKLHRLGHRVVLFAQMTQTLDILQDFLELRNYTYERLD 412 Query: 90 QGRTLDKDPCTIQEW-------------NEGKIPLLFAHPASCGHGLNLQYGGNILVFFS 136 ++ I+ + N + + G GLNL G + ++F+ Sbjct: 413 GSVRAEERFAAIRNFSSQPTKGGVRDDSNPSGAFVFMVSTRAGGVGLNL-IGADTVIFYE 471 Query: 137 LWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 W+ + +Q ++R + G V L++Q TI+E++++R K + + Sbjct: 472 QDWNPQADKQALQR-----THRIGQLNHVLSINLVSQRTIEEVIMRRAERKLKLSHNIFE 526 >gi|67600198|ref|XP_666342.1| SNF2 family N-terminal domain [Cryptosporidium hominis TU502] gi|54657319|gb|EAL36112.1| SNF2 family N-terminal domain [Cryptosporidium hominis] Length = 2142 Score = 80.0 bits (196), Expect = 2e-13, Method: Composition-based stats. Identities = 26/148 (17%), Positives = 54/148 (36%), Gaps = 18/148 (12%) Query: 69 APIIVAYHFNSDLARL---------QKAFPQGRTLDK-DPCTIQEWNEGKIPLL--FAHP 116 I++ F L L Q G T I+E+ +L Sbjct: 928 HKILIFTQFQLILDELENYCLWRGWQYMRLDGSTNKLIRELDIREFGLPDNYVLVYLICT 987 Query: 117 ASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTI 176 + G G+NL N +V + W+ Q ++R + G R V ++ L+ + ++ Sbjct: 988 RAGGLGINL-VSANHVVMYDEDWNPFVDLQAVDR-----AHRIGQTRDVCIWKLVTEWSV 1041 Query: 177 DELVLQRLRTKSTIQDLLLNALKKETIH 204 +E ++ K + +++ ++ H Sbjct: 1042 EERMVFGREQKLKLDKMIIKGSARDDNH 1069 >gi|66361648|ref|XP_627347.1| ISWI related chromatinic protein with an apicomplexan specific domain architecture composed of 3x PHD+SNF2 ATpase+2xPHD [Cryptosporidium parvum Iowa II] gi|46228727|gb|EAK89597.1| ISWI related chromatinic protein with an apicomplexan specific domain architecture composed of 3x PHD+SNF2 ATpase+2xPHD [Cryptosporidium parvum Iowa II] Length = 2140 Score = 80.0 bits (196), Expect = 2e-13, Method: Composition-based stats. Identities = 26/148 (17%), Positives = 54/148 (36%), Gaps = 18/148 (12%) Query: 69 APIIVAYHFNSDLARL---------QKAFPQGRTLDK-DPCTIQEWNEGKIPLL--FAHP 116 I++ F L L Q G T I+E+ +L Sbjct: 928 HKILIFTQFQLILDELENYCLWRGWQYMRLDGSTNKLIRELDIREFGLPDNYVLVYLICT 987 Query: 117 ASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTI 176 + G G+NL N +V + W+ Q ++R + G R V ++ L+ + ++ Sbjct: 988 RAGGLGINL-VSANHVVMYDEDWNPFVDLQAVDR-----AHRIGQTRDVCIWKLVTEWSV 1041 Query: 177 DELVLQRLRTKSTIQDLLLNALKKETIH 204 +E ++ K + +++ ++ H Sbjct: 1042 EERMVFGREQKLKLDKMIIKGSARDDNH 1069 >gi|317146955|ref|XP_001821784.2| SNF2 family helicase/ATPase [Aspergillus oryzae RIB40] Length = 1117 Score = 80.0 bits (196), Expect = 2e-13, Method: Composition-based stats. Identities = 35/178 (19%), Positives = 68/178 (38%), Gaps = 28/178 (15%) Query: 50 EVHDEKIKALE----VIIEKANA----API--IVAYHFNSDLARLQKAFPQGR------- 92 E K KAL ++++ PI +V + S L ++ A Sbjct: 933 EGPHTKTKALIAYLLETMDESKGLTDERPIKSVVFSAWTSHLDLIEIALKDNGITGFTRL 992 Query: 93 ----TLDKDPCTIQEW-NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQM 147 TL +QE+ + I +L A + G GLNL + + ++ Q Sbjct: 993 DGTMTLSARQKALQEFHDNNDITILLATIGAGGVGLNLTSASRVYIM-EPQYNPAAVAQA 1051 Query: 148 IERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIHV 205 ++R+ + G R V + +++I+E + + + K + D+ +N K + V Sbjct: 1052 VDRV-----HRIGQTREVTTVQFLMKDSIEEKIFELAKKKQQLADMSMNQRKLDKREV 1104 >gi|317031845|ref|XP_001393539.2| DNA repair protein RAD5 [Aspergillus niger CBS 513.88] Length = 1212 Score = 80.0 bits (196), Expect = 2e-13, Method: Composition-based stats. Identities = 21/84 (25%), Positives = 35/84 (41%), Gaps = 6/84 (7%) Query: 111 LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYL 170 +L + G GLNL N+ + WW Q I+R+ + G R V V Sbjct: 1109 VLLISLRAGGVGLNLTAASNVFMM-DPWWSFAIEAQAIDRV-----HRMGQTRDVQVTRF 1162 Query: 171 IAQNTIDELVLQRLRTKSTIQDLL 194 + +++I+ +L+ K I L Sbjct: 1163 VVKDSIEGRMLRVQERKMNIAGSL 1186 >gi|224125738|ref|XP_002319663.1| chromatin remodeling complex subunit [Populus trichocarpa] gi|222858039|gb|EEE95586.1| chromatin remodeling complex subunit [Populus trichocarpa] Length = 1404 Score = 80.0 bits (196), Expect = 2e-13, Method: Composition-based stats. Identities = 33/180 (18%), Positives = 62/180 (34%), Gaps = 33/180 (18%) Query: 44 EEKHWKEVHDEKIKALEVI--IEKANAAPIIVAYHFNSDLA-------RLQKAFPQGRTL 94 E + + + K+ L I + +V L RL + +G+ Sbjct: 1012 ENNYKEVDYSGKMVLLLDILVMSSDVGDKTLVFTQSIPTLDLIELYLSRLPRLGKKGKFW 1071 Query: 95 DK---------------DPCTIQEWNEGK---IPLLFAHPASCGHGLNLQYGGNILVFFS 136 K ++ +N+ K + + G+NL Y N +V Sbjct: 1072 RKGKDWYRLDGRTESSERQRLVERFNDPKNKRVKCTLISTRAGSLGINL-YAANRVVIVD 1130 Query: 137 LWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 W+ Q I R + G + VF Y L+A T++E + +R TK + +++ Sbjct: 1131 GSWNPTYDLQAI-----YRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVD 1185 >gi|156840700|ref|XP_001643729.1| hypothetical protein Kpol_1009p17 [Vanderwaltozyma polyspora DSM 70294] gi|156114352|gb|EDO15871.1| hypothetical protein Kpol_1009p17 [Vanderwaltozyma polyspora DSM 70294] Length = 1515 Score = 80.0 bits (196), Expect = 2e-13, Method: Composition-based stats. Identities = 20/156 (12%), Positives = 56/156 (35%), Gaps = 18/156 (11%) Query: 56 IKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQ----------GRTLDKDPCTI--QE 103 I ++ + K++ I++ F + + L + G + + Sbjct: 1344 IAVIKEVFSKSSTEKIVIFSQFITFFSILDYFLKKELNIETFQYDGSMNAQQRSDVLSDF 1403 Query: 104 WNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKR 163 + +L + GL L ++++ +W+ +Q +R + + Sbjct: 1404 YKSSSTRVLLISMKAGNSGLTLTCANHVII-VDPFWNPYVEEQAQDRC-----YRISQTK 1457 Query: 164 AVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 V +Y L +N++++ + + K + D ++ K Sbjct: 1458 TVQIYRLFIKNSVEDRIKELQDRKKKMVDAAMDPRK 1493 >gi|256086324|ref|XP_002579350.1| excision repair helicase ercc-6-related [Schistosoma mansoni] gi|238664781|emb|CAZ35589.1| excision repair helicase ercc-6-related [Schistosoma mansoni] Length = 1299 Score = 80.0 bits (196), Expect = 2e-13, Method: Composition-based stats. Identities = 23/118 (19%), Positives = 44/118 (37%), Gaps = 8/118 (6%) Query: 73 VAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNIL 132 + Y + RL + D+ + N+ ++ G GL + N + Sbjct: 667 IHYPTQHRILRLDGR--TAKVCDRLSIINKFQNDKSYTVMLLTTQVGGVGLTIT-SANRV 723 Query: 133 VFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 + W+ Q ++R + G K V VY LI T++E + +R K ++ Sbjct: 724 IILDPSWNPAVDSQAVDR-----AYRIGQKLDVVVYRLITCATVEEKIYRRQIFKDSV 776 >gi|224136438|ref|XP_002326860.1| chromatin remodeling complex subunit [Populus trichocarpa] gi|222835175|gb|EEE73610.1| chromatin remodeling complex subunit [Populus trichocarpa] Length = 576 Score = 80.0 bits (196), Expect = 2e-13, Method: Composition-based stats. Identities = 35/169 (20%), Positives = 71/169 (42%), Gaps = 25/169 (14%) Query: 55 KIKALEVIIE--KANAAPIIVAYHFNSDLARLQK------AFPQGR---------TLDKD 97 K K L +I +A ++V + L + K ++ QG +D+ Sbjct: 367 KTKFLMELIRLCQARNEKVLVFSQYLEPLNLVIKQLESNFSWIQGEDILYMHGKLKIDER 426 Query: 98 PCTIQEWNEGK--IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTR 155 I+ +N +L A +C G+NL G + +V + W+ +ER ++R Sbjct: 427 QILIKHFNNANSNAKVLLASTRACSEGINL-VGASRVVLLDVLWNPS-----VERQAISR 480 Query: 156 QRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIH 204 + G ++ V++Y+LI T++E K + +L+ + + + H Sbjct: 481 AYRLGQEKVVYIYHLITSGTMEEEKYFCQVEKERLSNLVFDCTNRSSNH 529 >gi|294891643|ref|XP_002773666.1| DNA helicase, putative [Perkinsus marinus ATCC 50983] gi|239878870|gb|EER05482.1| DNA helicase, putative [Perkinsus marinus ATCC 50983] Length = 741 Score = 80.0 bits (196), Expect = 2e-13, Method: Composition-based stats. Identities = 34/155 (21%), Positives = 61/155 (39%), Gaps = 21/155 (13%) Query: 55 KIKALEVIIE--KANAAPIIVAYHFNSDLARL---------QKAFPQGRT-LDKDPCTIQ 102 K+ AL+ I+ +A +++ L L + G T D I+ Sbjct: 487 KMMALDGILPKLRATGHRVLIFSQMTKLLNILELYLTFRNFRYLRLDGSTGADDRERRIE 546 Query: 103 EWN--EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 +N + G G+NLQ + ++ F W+ + +Q +R + G Sbjct: 547 LFNSSNSNYFAFILSTRAGGLGINLQT-ADTVIIFDSDWNPQNDEQA-----QSRAHRLG 600 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 K V + LI N+++E +LQ+ K QD L+ Sbjct: 601 QKSEVRTFRLITLNSVEEGMLQKAGEKMD-QDALV 634 >gi|168229242|ref|NP_001108200.1| helicase-like transcription factor alpha [Oryctolagus cuniculus] gi|60390953|sp|Q95216|HLTF_RABIT RecName: Full=Helicase-like transcription factor; AltName: Full=RUSH-1; AltName: Full=SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 3; AltName: Full=Sucrose nonfermenting protein 2-like 3 gi|1655930|gb|AAC18656.1| RUSH-1alpha [Oryctolagus cuniculus] Length = 1005 Score = 80.0 bits (196), Expect = 2e-13, Method: Composition-based stats. Identities = 29/170 (17%), Positives = 61/170 (35%), Gaps = 23/170 (13%) Query: 39 AVYYDEEKHWKEVHDEKIKALE----VIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTL 94 A +++ + + KI AL + K +V F + L+ ++ + Sbjct: 815 ACDSEKKSNMEWTSSSKINALMHALIDLRTKNPNIKSLVVSQFTTFLSLIETPLKASGFV 874 Query: 95 ----------DKDPCTIQEWNE---GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDL 141 K +IQ + G ++ + G GLNL + + W+ Sbjct: 875 FTRLDGSMAQKKRVESIQCFQNTEAGSPTIMLLSLKAGGVGLNL-CAASRVFLMDPAWNP 933 Query: 142 EEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQ 191 Q +R + G K+ V + I +++++E +L+ TK + Sbjct: 934 AAEDQRFDRC-----HRLGQKQEVIITKFIVKDSVEENMLKIQNTKRELA 978 >gi|70998502|ref|XP_753973.1| SNF2 family helicase/ATPase [Aspergillus fumigatus Af293] gi|66851609|gb|EAL91935.1| SNF2 family helicase/ATPase, putative [Aspergillus fumigatus Af293] Length = 1827 Score = 80.0 bits (196), Expect = 2e-13, Method: Composition-based stats. Identities = 27/157 (17%), Positives = 60/157 (38%), Gaps = 19/157 (12%) Query: 53 DEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQKAFPQGR----------TLDKDPCT 100 + + L+ II ++ ++V H L ++ + + Sbjct: 1390 SYRAQLLDRIISESIKAGDKVLVFSHSIPTLNYVEHVLKISKRSYRRLDGKTPISTRQAA 1449 Query: 101 IQEWNE-GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQA 159 + +N + + G GLN+ G N +V F ++ +Q + R + Sbjct: 1450 TKSFNTVSDEKVYLISTRAGGLGLNI-PGANRVVIFDFSFNPIWEEQAVGR-----AYRL 1503 Query: 160 GFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 G ++ VFVY IA T +E++ + K+ + +++ Sbjct: 1504 GQQKPVFVYRFIAGGTFEEIIYNKAIFKTQLAVRVVD 1540 >gi|269796315|ref|YP_003315770.1| DNA/RNA helicase [Sanguibacter keddieii DSM 10542] gi|269098500|gb|ACZ22936.1| DNA/RNA helicase, superfamily II, SNF2 family [Sanguibacter keddieii DSM 10542] Length = 741 Score = 80.0 bits (196), Expect = 2e-13, Method: Composition-based stats. Identities = 31/156 (19%), Positives = 63/156 (40%), Gaps = 21/156 (13%) Query: 53 DEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQKAFPQGRT------------LDKDP 98 K+ L I+E A + ++V +F + +++ + R + Sbjct: 547 SSKLGRLLEILEDAAESGEKVVVFSYFRDVVDLVRRTVAETRPDAVYGPLWGGVAAEDRQ 606 Query: 99 CTIQEWNE-GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 + ++ +L A + G GLN+Q N++V Q + R+ R Sbjct: 607 AAVDDFTAAPPGAVLVAQVDAGGVGLNIQ-AANVVVICEPQLKPTTEAQAVARV-----R 660 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDL 193 + G R+V V+ L+ + ++DE + + L KS + D Sbjct: 661 RMGQVRSVRVHRLLVEGSVDERIRELLTAKSRVFDE 696 >gi|196003012|ref|XP_002111373.1| hypothetical protein TRIADDRAFT_55310 [Trichoplax adhaerens] gi|190585272|gb|EDV25340.1| hypothetical protein TRIADDRAFT_55310 [Trichoplax adhaerens] Length = 849 Score = 80.0 bits (196), Expect = 2e-13, Method: Composition-based stats. Identities = 30/171 (17%), Positives = 60/171 (35%), Gaps = 14/171 (8%) Query: 33 LQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLAR----LQKAF 88 L+L GA ++ H+ K+ E + I ++ F S L+ Sbjct: 630 LELELGANTSNDNSDVHGNHETKVTRRTNKTED-EGSSIDYSWAFPSMAHYAPGVLEHGI 688 Query: 89 PQGRTLDKDPCTIQEWNEGKIP---LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQ 145 + I +N L + G+NL N +V + W+ Sbjct: 689 DGSVPSHERSRLIDLFNSPDNNSVWLFLISTRAGNLGINL-VAANRVVIYDSAWNPCYDN 747 Query: 146 QMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 Q RI + G K+ ++Y L+ NT++ ++ + K + +++ Sbjct: 748 QAAFRI-----YRYGQKKPCYIYRLVGSNTMEHVIYKCQIRKQGLSRRIID 793 >gi|118089602|ref|XP_420305.2| PREDICTED: similar to putative DNA dependent ATPase and helicase [Gallus gallus] Length = 2533 Score = 80.0 bits (196), Expect = 2e-13, Method: Composition-based stats. Identities = 38/201 (18%), Positives = 73/201 (36%), Gaps = 26/201 (12%) Query: 9 RELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKI---KALEVIIEK 65 ++ D E +E + L++A +E V + + +E +E Sbjct: 2045 KDFVTDADAEVLEHSGKMVLLFEILRMA------EELGDKVLVFSQSLISLDLIEDFLEL 2098 Query: 66 ANAAPI----IVAY-----HFNS-DLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAH 115 AN Y F + D RL + ++ K + + L Sbjct: 2099 ANREKTDKEKPPIYKGEGKWFRNIDYYRLDGST-TAQSRKKWAEEFNDETNVRGRLFIIS 2157 Query: 116 PASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNT 175 + G+NL N ++ F W+ Q I R+ + G + VFVY +AQ T Sbjct: 2158 TKAGSLGINL-VAANRVIIFDASWNPSYDIQSIFRV-----YRFGQSKPVFVYRFLAQGT 2211 Query: 176 IDELVLQRLRTKSTIQDLLLN 196 +++ + R TK ++ +++ Sbjct: 2212 MEDKIYDRQVTKQSLSFRVVD 2232 >gi|325274896|ref|ZP_08140906.1| DNA helicase [Pseudomonas sp. TJI-51] gi|324099980|gb|EGB97816.1| DNA helicase [Pseudomonas sp. TJI-51] Length = 659 Score = 80.0 bits (196), Expect = 2e-13, Method: Composition-based stats. Identities = 43/201 (21%), Positives = 69/201 (34%), Gaps = 35/201 (17%) Query: 8 QRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKA- 66 +R+ Y L + + K K QL + K L I Sbjct: 461 ERDQY--LAAVSDNTQTAIVKIGKIRQL---------------LERLKASWLIDTITSLG 503 Query: 67 NAAPIIVAYHFNSDLARLQKAFPQGRTLD----------KDPCTIQEW-NEGKIPLLFAH 115 + I+ + +A L F + + I + ++ + + Sbjct: 504 DDDKSIIFCEYTESVAYLADEFAKAGIQTVTFTGSNSGTRKQKAIDTFMSDPAVKVFIGT 563 Query: 116 PASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNT 175 + G GLNL N + F SL W +R R + G KRAV V + T Sbjct: 564 TKAAGVGLNL-VAANYVFFASLPW-----TAAAKRQAEDRAYRNGQKRAVTVLMPVISGT 617 Query: 176 IDELVLQRLRTKSTIQDLLLN 196 IDE V+ L+ K +I+ LL+ Sbjct: 618 IDEQVVLLLQHKESIEQDLLD 638 >gi|159126293|gb|EDP51409.1| SNF2 family helicase/ATPase, putative [Aspergillus fumigatus A1163] Length = 1827 Score = 80.0 bits (196), Expect = 2e-13, Method: Composition-based stats. Identities = 27/157 (17%), Positives = 60/157 (38%), Gaps = 19/157 (12%) Query: 53 DEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQKAFPQGR----------TLDKDPCT 100 + + L+ II ++ ++V H L ++ + + Sbjct: 1390 SYRAQLLDRIISESIKAGDKVLVFSHSIPTLNYVEHVLKISKRSYRRLDGKTPISTRQAA 1449 Query: 101 IQEWNE-GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQA 159 + +N + + G GLN+ G N +V F ++ +Q + R + Sbjct: 1450 TKSFNTVSDEKVYLISTRAGGLGLNI-PGANRVVIFDFSFNPIWEEQAVGR-----AYRL 1503 Query: 160 GFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 G ++ VFVY IA T +E++ + K+ + +++ Sbjct: 1504 GQQKPVFVYRFIAGGTFEEIIYNKAIFKTQLAVRVVD 1540 >gi|23193481|gb|AAN14535.1|AF459085_1 SNF2P [Hordeum vulgare] Length = 882 Score = 80.0 bits (196), Expect = 2e-13, Method: Composition-based stats. Identities = 31/175 (17%), Positives = 68/175 (38%), Gaps = 32/175 (18%) Query: 42 YDEEKHWKEVHDEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQ----------KAFP 89 Y+E +H + K+ L++++EK + +++ L LQ + Sbjct: 354 YEEGEHLVQ-ASGKLIVLDLVLEKLHRLGHRVVLFAQMTQTLDILQDFLELRNYTYERLD 412 Query: 90 QGRTLDKDPCTIQEW-------------NEGKIPLLFAHPASCGHGLNLQYGGNILVFFS 136 ++ I+ + N + + G GLNL G + ++F+ Sbjct: 413 GSVRAEERFAAIRNFSSQATKGVVRDDNNPSGAFVFMISTRAGGVGLNL-IGADTVIFYE 471 Query: 137 LWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQ 191 W+ + +Q ++R + G V L++Q TI+E++++R K + Sbjct: 472 QDWNPQADKQALQR-----THRIGQLNHVLSINLVSQRTIEEVIMRRAERKLKLS 521 >gi|224178882|ref|XP_002187939.1| PREDICTED: hypothetical protein, partial [Taeniopygia guttata] Length = 181 Score = 80.0 bits (196), Expect = 2e-13, Method: Composition-based stats. Identities = 18/98 (18%), Positives = 45/98 (45%), Gaps = 6/98 (6%) Query: 100 TIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQA 159 I+ + + I + + G G+NL + ++F ++ + Q I R + Sbjct: 18 AIKNFGQQPIFIFLLSTRAGGVGMNLT-AADTVIFTDSDFNPQNDLQAIAR-----AHRI 71 Query: 160 GFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 G + V + LI ++T++E++ +R +K + + ++ Sbjct: 72 GQHKPVKIIRLIGRDTVEEIIYRRAASKLRLTNAIVEG 109 >gi|323705968|ref|ZP_08117539.1| SNF2-related protein [Thermoanaerobacterium xylanolyticum LX-11] gi|323534766|gb|EGB24546.1| SNF2-related protein [Thermoanaerobacterium xylanolyticum LX-11] Length = 930 Score = 80.0 bits (196), Expect = 2e-13, Method: Composition-based stats. Identities = 35/213 (16%), Positives = 79/213 (37%), Gaps = 30/213 (14%) Query: 7 FQRELYCDLQGE---NIEAFNSASKTVKCLQLANGA--VYYDEEKHWKEVHDE--KIKAL 59 FQ +LYC L N + + K ++L + D + + +E K++ L Sbjct: 699 FQEKLYCQLIENYKNNEKKESPLGVLQKLMELCAHPRLIQDDGDGDTYKFINESGKLQRL 758 Query: 60 EVIIEK--ANAAPIIVAYHFNSDLARLQKAF----------PQGRTLDKDPCTIQEWN-E 106 I+ + ++ H+ L+K G I ++ Sbjct: 759 IEIMNEIKLKGEKAVIFTHYIKMQTILRKVIMDVFGINCLVINGNIKGDRMSVIDKFRKS 818 Query: 107 GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVF 166 ++ + G G+ + N ++ ++ W+ +Q +R+ + G R V Sbjct: 819 PGFNIIILSTRAAGVGITITEANN-VIHYTRDWNPAVEKQATDRV-----YRIGQTREVN 872 Query: 167 VYYLIAQN----TIDELVLQRLRTKSTIQDLLL 195 +YY I + T++E + + L+ K + + ++ Sbjct: 873 IYYPICTSSRGKTVEERLNEVLQKKIQLLNEVI 905 >gi|147817208|emb|CAN70867.1| hypothetical protein VITISV_027610 [Vitis vinifera] Length = 1177 Score = 80.0 bits (196), Expect = 2e-13, Method: Composition-based stats. Identities = 24/119 (20%), Positives = 51/119 (42%), Gaps = 13/119 (10%) Query: 90 QGRTLDKDPC-TIQEWNEG---KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQ 145 GRT + ++ +N+ ++ + G+NL + N ++ W+ Sbjct: 983 DGRTEGSERQKLVERFNDPLNKRVKCTLISTRAGSLGINL-HSANRVIIVDGSWNPTYDL 1041 Query: 146 QMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIH 204 Q I R + G + VF Y L+A T++E + +R TK + +++ ++ +H Sbjct: 1042 QAI-----YRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVD---RQQVH 1092 >gi|297734575|emb|CBI16626.3| unnamed protein product [Vitis vinifera] Length = 832 Score = 80.0 bits (196), Expect = 2e-13, Method: Composition-based stats. Identities = 28/182 (15%), Positives = 67/182 (36%), Gaps = 32/182 (17%) Query: 42 YDEEKHWKEVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQKAFPQGR----TLD 95 Y+E +H + K+ L+ +++K + +++ L LQ + LD Sbjct: 353 YEEGEHLVQ-ASGKLIILDQLLQKLYNSGHRVLLFAQMTHTLDILQDFMELRKYSYERLD 411 Query: 96 KDPCTIQEW---------------NEGKIP----LLFAHPASCGHGLNLQYGGNILVFFS 136 + + N + + + G GLNL + ++F+ Sbjct: 412 GSVRAEERFSAIRSFSRQIVEGSLNSQDVQSSAFVFMISTRAGGVGLNL-VAADTVIFYE 470 Query: 137 LWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 W+ + +Q ++R + G V L+ T++E++++R K + ++ Sbjct: 471 QDWNPQVDKQALQR-----AHRIGQMNHVLSINLVTGRTVEEIIMRRAERKLQLSHNVVG 525 Query: 197 AL 198 + Sbjct: 526 EV 527 >gi|193785791|dbj|BAG51226.1| unnamed protein product [Homo sapiens] Length = 793 Score = 80.0 bits (196), Expect = 2e-13, Method: Composition-based stats. Identities = 34/180 (18%), Positives = 66/180 (36%), Gaps = 39/180 (21%) Query: 52 HDEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQKAFPQGRT---------------- 93 + K+ L +IE++ I+V S LA +++ + Sbjct: 45 NSPKMVLLFHLIEESVKLGDKILVFSQSLSTLALIEEFLGKREVPCPPGTEGQGAQKWVR 104 Query: 94 ------LD------KDPCTIQEWNEGKIP---LLFAHPASCGHGLNLQYGGNILVFFSLW 138 LD + I +N+ L + G+NL G N +V F Sbjct: 105 NISYFRLDGSTPAFERERLINRFNDPSNLTTWLFLLSTRAGCLGVNL-IGANRVVVFDAS 163 Query: 139 WDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNAL 198 W+ Q + R + G K+ ++Y L+A T+++ + R +K + D +++ L Sbjct: 164 WNPCHDAQAV-----CRVYRYGQKKPCYIYRLVADYTLEKKIYDRQISKQGMSDRVVDDL 218 >gi|323455069|gb|EGB10938.1| hypothetical protein AURANDRAFT_21920 [Aureococcus anophagefferens] Length = 157 Score = 80.0 bits (196), Expect = 2e-13, Method: Composition-based stats. Identities = 26/145 (17%), Positives = 50/145 (34%), Gaps = 19/145 (13%) Query: 65 KANAAPIIVAYHFNSDLARL----------QKAFPQGRTLDKDPCTIQEWNE---GKIPL 111 KA ++V L L + I +N + L Sbjct: 6 KARGHRVLVFSQMTKMLDVLGEYCALRQFAYERLDGDTAARDRARRIDRFNAAAADRAFL 65 Query: 112 LFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLI 171 + G G+NL N +V + W+ Q + R + G V VY L+ Sbjct: 66 FLLSTRAGGLGVNL-ATANTVVIYDADWNPHNDLQALAR-----AHRLGQTDRVLVYRLV 119 Query: 172 AQNTIDELVLQRLRTKSTIQDLLLN 196 + T++E +L+ + K ++ +++ Sbjct: 120 CRATVEERILEVAKRKLLLEHVVVE 144 >gi|225453462|ref|XP_002274161.1| PREDICTED: hypothetical protein [Vitis vinifera] Length = 983 Score = 80.0 bits (196), Expect = 2e-13, Method: Composition-based stats. Identities = 28/182 (15%), Positives = 67/182 (36%), Gaps = 32/182 (17%) Query: 42 YDEEKHWKEVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQKAFPQGR----TLD 95 Y+E +H + K+ L+ +++K + +++ L LQ + LD Sbjct: 461 YEEGEHLVQ-ASGKLIILDQLLQKLYNSGHRVLLFAQMTHTLDILQDFMELRKYSYERLD 519 Query: 96 KDPCTIQEW---------------NEGKIP----LLFAHPASCGHGLNLQYGGNILVFFS 136 + + N + + + G GLNL + ++F+ Sbjct: 520 GSVRAEERFSAIRSFSRQIVEGSLNSQDVQSSAFVFMISTRAGGVGLNL-VAADTVIFYE 578 Query: 137 LWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 W+ + +Q ++R + G V L+ T++E++++R K + ++ Sbjct: 579 QDWNPQVDKQALQR-----AHRIGQMNHVLSINLVTGRTVEEIIMRRAERKLQLSHNVVG 633 Query: 197 AL 198 + Sbjct: 634 EV 635 >gi|156097905|ref|XP_001614985.1| hypothetical protein [Plasmodium vivax SaI-1] gi|148803859|gb|EDL45258.1| hypothetical protein, conserved [Plasmodium vivax] Length = 1102 Score = 80.0 bits (196), Expect = 2e-13, Method: Composition-based stats. Identities = 21/101 (20%), Positives = 41/101 (40%), Gaps = 6/101 (5%) Query: 93 TLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIG 152 T+++ + + + + G GLNL N ++ W+ +R Sbjct: 985 TIERQKIIKRFSKNDNVFIFLLSTKAGGVGLNL-IAANHVILMDQDWNPH-----NDRQA 1038 Query: 153 VTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDL 193 R + G K V++Y L +NTI+E +L+ + K + Sbjct: 1039 EDRVHRLGQKNEVYIYRLCCKNTIEETILRCCKAKLHLDQA 1079 >gi|242018945|ref|XP_002429929.1| conserved hypothetical protein [Pediculus humanus corporis] gi|212514975|gb|EEB17191.1| conserved hypothetical protein [Pediculus humanus corporis] Length = 1234 Score = 80.0 bits (196), Expect = 2e-13, Method: Composition-based stats. Identities = 27/175 (15%), Positives = 63/175 (36%), Gaps = 36/175 (20%) Query: 52 HDEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEW----- 104 K+ L I++ + ++V + + L ++ + W Sbjct: 920 ASGKLVLLFQILKICHQAGDKLLVFSQYLTTLNLIEYFLRFVNDNNNKNDECNTWVTGVD 979 Query: 105 -----------------------NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDL 141 N ++ LL + G G+NL N ++ F + W+ Sbjct: 980 YYRIDGTTNSQSRFDYCKKFNDKNNKRLRLLLISTRAGGLGINL-VSANRVIIFDVSWNP 1038 Query: 142 EEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 Q I R+ + G ++ ++Y +++ T++E + QR TK ++ +++ Sbjct: 1039 SHDLQSIFRV-----YRFGQRKTCYIYRFLSEATMEEKIYQRQVTKLSLAHRIID 1088 >gi|302509082|ref|XP_003016501.1| hypothetical protein ARB_04790 [Arthroderma benhamiae CBS 112371] gi|291180071|gb|EFE35856.1| hypothetical protein ARB_04790 [Arthroderma benhamiae CBS 112371] Length = 1187 Score = 80.0 bits (196), Expect = 2e-13, Method: Composition-based stats. Identities = 29/171 (16%), Positives = 65/171 (38%), Gaps = 20/171 (11%) Query: 40 VYYDEEKHWKEVHDEKIKALEVIIEKANAAPI--IVAYHFNSDLARLQKAFPQGRT---- 93 +Y K + + E + + PI ++ + S L ++ A + Sbjct: 1002 LYEGPHTKTKALISHLLDTAEDNKKSSCQPPIKSVIFSAWTSHLDLIEIALEENGLTGYT 1061 Query: 94 -------LDKDPCTIQEW-NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQ 145 L + +I+ + + + +L + G GLNL G+++ ++ Sbjct: 1062 RLDGTMSLKQRNASIETFSTDDNVTILLVTIGAGGVGLNLT-AGSMVYIMEPQYNPAAIA 1120 Query: 146 QMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 Q ++R+ + G R V I ++I+E + + + K + D+ LN Sbjct: 1121 QAVDRV-----HRIGQTREVTTIQFIMNDSIEEKITELAKRKQKLADMSLN 1166 >gi|42562605|ref|NP_175265.3| CHR18; ATP binding / DNA binding / helicase/ nucleic acid binding [Arabidopsis thaliana] gi|332194152|gb|AEE32273.1| chromatin remodeling factor18 [Arabidopsis thaliana] Length = 673 Score = 80.0 bits (196), Expect = 2e-13, Method: Composition-based stats. Identities = 29/169 (17%), Positives = 63/169 (37%), Gaps = 22/169 (13%) Query: 40 VYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRT------ 93 +Y D + LE +IE +V H S L L + + + Sbjct: 461 IYTDS---AVAKIPAVLDYLENVIEA--GCKFLVFAHHQSMLEELHQFLKKKKVGCIRID 515 Query: 94 ----LDKDPCTIQEWNE-GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMI 148 + ++ + +I + G G+ L + ++F L W + Q Sbjct: 516 GSTPASSRQALVSDFQDKDEIKAAVLSIRAAGVGITLT-AASTVIFAELSWTPGDLIQAE 574 Query: 149 ERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 +R + G +V ++YL+A +T+D+++ +++K +L+ Sbjct: 575 DR-----AHRIGQVSSVNIHYLLANDTVDDIIWDVVQSKLDNLGQMLDG 618 >gi|317149017|ref|XP_001823066.2| SNF2 family helicase/ATPase [Aspergillus oryzae RIB40] Length = 1364 Score = 80.0 bits (196), Expect = 2e-13, Method: Composition-based stats. Identities = 29/149 (19%), Positives = 59/149 (39%), Gaps = 19/149 (12%) Query: 61 VIIEKA--NAAPIIVAYHFNSDLARL---------QKAFPQGRTLDKDPCT-IQEWNEG- 107 II+++ I+V H L + + + GRT + +N G Sbjct: 959 SIIDESIRAGDKILVFSHSIPTLDYIEHVLRSSNRKYSRLDGRTPVVTRQDATKRFNLGS 1018 Query: 108 KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFV 167 + + + G GLN+ N ++ F + +Q + R + G ++ VFV Sbjct: 1019 EKQVYLISTRAGGLGLNIPV-ANRVIIFDFKFSPVWEEQAVGR-----AYRLGQQKPVFV 1072 Query: 168 YYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 Y IA T +E++ + K+ + +++ Sbjct: 1073 YRFIAGGTFEEVMYNKAVFKTQLAFRVVD 1101 >gi|148702943|gb|EDL34890.1| mCG123397, isoform CRA_a [Mus musculus] Length = 184 Score = 80.0 bits (196), Expect = 2e-13, Method: Composition-based stats. Identities = 27/163 (16%), Positives = 57/163 (34%), Gaps = 19/163 (11%) Query: 53 DEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTL----------DKDPCTIQ 102 + + AL + K +V F + L+ ++ + K +IQ Sbjct: 11 NALMHALIELRTKDPNIKSLVVSQFTTFLSLIETPLKASGFVFTRLDGSMAQKKRVESIQ 70 Query: 103 EWNE---GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQA 159 + G ++ + G GLNL + + W+ Q +R + Sbjct: 71 RFQNTEAGSPTIMLLSLKAGGVGLNL-CAASRVFLMDPAWNPAAEDQCFDRC-----HRL 124 Query: 160 GFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKET 202 G K+ V + I +++++E +L+ TK + K + Sbjct: 125 GQKQEVIITKFIVKDSVEENMLKIQNTKRDLAAGAFGTKKTDA 167 >gi|284925122|ref|NP_001165424.1| SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4 [Xenopus laevis] gi|59805006|gb|AAX08100.1| Brg1 [Xenopus laevis] Length = 1600 Score = 80.0 bits (196), Expect = 2e-13, Method: Composition-based stats. Identities = 30/177 (16%), Positives = 62/177 (35%), Gaps = 24/177 (13%) Query: 35 LANGAVYYDEEKHWKEVHDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAFPQGR 92 G V + K + L+ I+ +A +++ + + ++ F Sbjct: 1050 FTGGIVQGQD----VYRASGKFELLDRILPKLRATNHKVLLFCQMTTLMTIMEDYFAYRG 1105 Query: 93 TL----------DKDPCTIQEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWD 140 D ++ +NE + + + G GLNLQ + +V F W+ Sbjct: 1106 FKYLRLDGTTKADDRGMLLKTFNEPGSEYFIFLLSTRAGGLGLNLQ-SADTVVIFDSDWN 1164 Query: 141 LEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + Q R + G + V V L N+++E +L + K + ++ A Sbjct: 1165 PHQDLQA-----QDRAHRIGPQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQA 1216 >gi|218200089|gb|EEC82516.1| hypothetical protein OsI_27014 [Oryza sativa Indica Group] Length = 700 Score = 80.0 bits (196), Expect = 2e-13, Method: Composition-based stats. Identities = 29/158 (18%), Positives = 58/158 (36%), Gaps = 19/158 (12%) Query: 54 EKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTL-----------DKDPCTIQ 102 + L IIE ++ H S L + + + + + Sbjct: 509 AVLDYLGTIIEA--ECKFLIFAHHQSMLEAIHQHLLKKKVKCIRIDGQTPVPVRQTLVTD 566 Query: 103 EWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFK 162 N+ I + G GL L + ++F L W + Q +R + G Sbjct: 567 FQNKDDIKAAVLSIKAGGVGLTLT-AASTVIFAELSWTPGDLIQAEDR-----AHRIGQV 620 Query: 163 RAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKK 200 +V +YYL+A +T+D+++ ++ K +L+ +K Sbjct: 621 SSVNIYYLLANDTVDDIIWDVVQGKLENLGQMLDGQEK 658 >gi|157310977|ref|YP_001468973.1| putative helicase [Corynebacterium phage P1201] gi|95832125|gb|ABF57525.1| putative helicase [Corynebacterium phage P1201] Length = 656 Score = 80.0 bits (196), Expect = 2e-13, Method: Composition-based stats. Identities = 36/228 (15%), Positives = 78/228 (34%), Gaps = 36/228 (15%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLAN--GAVYYDEEKHWKEV-------H 52 K Y + Q + L ++ A + + Q A G + E+ EV Sbjct: 422 KAYAEMQEDAIAYLDSGSVVANGQLAVMTRLKQFAGCYGTIETKEDADGFEVDAFKPALP 481 Query: 53 DEKIKALEVIIEKA----------NAAPIIVAYHFNSDLARLQKAFPQGRTL-------- 94 K L + + A ++VA F S + Q A + Sbjct: 482 SNKFTWLLEFLSELGIDKEGDSGPQARKVVVASQFTSVINIFQAALEKRGIKTLKVAGGV 541 Query: 95 --DKDPCTIQEWNEGKIP-LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERI 151 + + + P + + + G L L +I++ + ++ +Q+ +R+ Sbjct: 542 SAGERKRAAELFQTDHGPQVFLLNTNAGGVALTLDRADDIVIL-DETFIPDDQEQVEDRV 600 Query: 152 GVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 + V ++YL ++ TI+E + + + IQ +L+ + Sbjct: 601 -----HRVSRNHNVTIHYLRSKGTIEESIARTTFGRDQIQKQVLDGER 643 >gi|119498439|ref|XP_001265977.1| SNF2 family helicase/ATPase, putative [Neosartorya fischeri NRRL 181] gi|119414141|gb|EAW24080.1| SNF2 family helicase/ATPase, putative [Neosartorya fischeri NRRL 181] Length = 1777 Score = 80.0 bits (196), Expect = 2e-13, Method: Composition-based stats. Identities = 27/157 (17%), Positives = 61/157 (38%), Gaps = 19/157 (12%) Query: 53 DEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQKAFPQGR----------TLDKDPCT 100 + + L+ II ++ ++V H L ++ + + Sbjct: 1389 SYRAQLLDRIISESIKAGDKVLVFSHSIPTLDYVEHVLKISKRSYRRLDGKTPISTRQAA 1448 Query: 101 IQEWNE-GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQA 159 + +N + + + G GLN+ G N +V F ++ +Q + R + Sbjct: 1449 TKSFNTVSEEKVYLISTRAGGLGLNI-PGANRVVIFDFSFNPIWEEQAVGR-----AYRL 1502 Query: 160 GFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 G ++ VFVY IA T +E++ + K+ + +++ Sbjct: 1503 GQQKPVFVYRFIAGGTFEEIIYNKAIFKTQLAVRVVD 1539 >gi|149245206|ref|XP_001527137.1| hypothetical protein LELG_01966 [Lodderomyces elongisporus NRRL YB-4239] gi|146449531|gb|EDK43787.1| hypothetical protein LELG_01966 [Lodderomyces elongisporus NRRL YB-4239] Length = 357 Score = 80.0 bits (196), Expect = 2e-13, Method: Composition-based stats. Identities = 25/143 (17%), Positives = 54/143 (37%), Gaps = 20/143 (13%) Query: 68 AAPIIVAYHFNSDLARLQKAFPQ------------GRTLDKDPCTI-QEW-NEGKIPLLF 113 ++ L ++ + G T + +I +++ + I +L Sbjct: 124 EHRALIFCQLKDMLDIVENDLLKKYLPSVTYMRLDGSTDPRHRQSIVRKFDEDPSIDVLL 183 Query: 114 AHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQ 173 G L G + ++F W+ Q ++R + G K+ V VY LI + Sbjct: 184 LTTKVGGLAEYLT-GADTVIFVEHDWNPMNDLQAMDR-----AHRLGQKKVVNVYRLITK 237 Query: 174 NTIDELVLQRLRTKSTIQDLLLN 196 +T++E ++ + K I ++N Sbjct: 238 DTLEEKIMGLQKFKMNIASTIVN 260 >gi|193084056|gb|ACF09729.1| helicase SNF2/RAD54 family [uncultured marine crenarchaeote KM3-86-C1] Length = 569 Score = 80.0 bits (196), Expect = 2e-13, Method: Composition-based stats. Identities = 36/149 (24%), Positives = 61/149 (40%), Gaps = 12/149 (8%) Query: 54 EKIKALEVIIEKANAAPIIVAYHFNSDL--ARLQK----AFPQGRTLDKDPCTIQEWNEG 107 I ++ I+E + + + + L LQ+ A G++ I + G Sbjct: 401 HVIDFVKNIMEIEESVVVFCHHKYIHKLLHESLQEFNPAAIIGGQSDKVRQENIDNFQNG 460 Query: 108 KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFV 167 L+ + G+NL ++F L W H+Q +R+ + G K VF Sbjct: 461 GTKLIIVGLRAGNLGINLTR-AKYVIFAELDWSPAIHRQAEDRL-----HRIGQKNTVFA 514 Query: 168 YYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 YYLI + T+DE V L KS D +++ Sbjct: 515 YYLIGKRTLDEHVANILVDKSYEIDAIMD 543 >gi|145513841|ref|XP_001442831.1| hypothetical protein [Paramecium tetraurelia strain d4-2] gi|124410192|emb|CAK75434.1| unnamed protein product [Paramecium tetraurelia] Length = 1024 Score = 80.0 bits (196), Expect = 2e-13, Method: Composition-based stats. Identities = 39/218 (17%), Positives = 79/218 (36%), Gaps = 28/218 (12%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSA--SKTVKCLQLANGA----VYYDEEKHWKEV--HD 53 K Y + + ++ ++ + A + ++ ++ N + D + E+ Sbjct: 615 KIYDQINQRGVMTFDQQSGKSGSQALQNLMMQLRKICNHPYLFMLNLDMNRVTDEIWRSS 674 Query: 54 EKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQKAFP---------QGRTLDKDPCT-I 101 K + L+ II K +++ + ++ F G T +D + I Sbjct: 675 GKFELLDRIIPKLLYFKHRLLIFSQMTQLMDIMEAFFEYRGWRYLRLDGSTKSEDRESRI 734 Query: 102 QEWNEGK--IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQA 159 Q +N+ + + G GLNLQ + +V F W+ Q R + Sbjct: 735 QLFNQENSIYNIFLLSTRAGGLGLNLQ-SADTVVLFDSDWNPMMDLQA-----QDRAYRI 788 Query: 160 GFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 G K V V LI I+ +L + K + +++ A Sbjct: 789 GQKNEVRVLRLITATQIEGNILSKAEHKMGLDAVIIQA 826 >gi|18606158|gb|AAH22975.1| Smarca2 protein [Mus musculus] Length = 495 Score = 80.0 bits (196), Expect = 2e-13, Method: Composition-based stats. Identities = 25/115 (21%), Positives = 47/115 (40%), Gaps = 9/115 (7%) Query: 86 KAFPQGRTLDKDPCTI-QEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLE 142 G T +D + +++NE + + + G GLNLQ + +V F W+ Sbjct: 16 YLRLDGTTKSEDRAALLKKFNEPGSQYFIFLLSTRAGGLGLNLQ-AADTVVIFDSDWNPH 74 Query: 143 EHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + Q R + G + V V L N+++E +L + K + ++ A Sbjct: 75 QDLQA-----QDRAHRIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQA 124 >gi|255715185|ref|XP_002553874.1| KLTH0E09174p [Lachancea thermotolerans] gi|238935256|emb|CAR23437.1| KLTH0E09174p [Lachancea thermotolerans] Length = 1148 Score = 80.0 bits (196), Expect = 2e-13, Method: Composition-based stats. Identities = 37/191 (19%), Positives = 77/191 (40%), Gaps = 29/191 (15%) Query: 26 ASKTVKCLQLANGA-----VYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSD 80 A + K L L N + V+Y+ ++ +K+L+ + + ++ ++V F+S Sbjct: 945 AIDSKKLLTLENDSNKIKIVHYNGGSKSSKITS-LVKSLKRLQDVSSGEQVVVFSQFSSF 1003 Query: 81 LARLQK--------------AFPQGRTLDKDPCTIQEW---NEGKIPLLFAHPASCGHGL 123 L +Q+ F ++ + + ++ + K+ +L + G GL Sbjct: 1004 LDIMQRELSASFSSSVAQIYKFDGRLSMKERSRVLHDFATKDLSKLKILLLSLKAGGVGL 1063 Query: 124 NLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQR 183 NL + WW Q I+RI + G V V I +++I+E +L+ Sbjct: 1064 NLTC-ASRAYMMDPWWSPSLEDQAIDRI-----HRIGQVNDVKVVRFIMEHSIEEKMLRI 1117 Query: 184 LRTKSTIQDLL 194 K T+ + + Sbjct: 1118 QERKRTLGEAV 1128 >gi|47212607|emb|CAF93283.1| unnamed protein product [Tetraodon nigroviridis] Length = 905 Score = 80.0 bits (196), Expect = 2e-13, Method: Composition-based stats. Identities = 25/85 (29%), Positives = 39/85 (45%), Gaps = 6/85 (7%) Query: 111 LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYL 170 + F + G GLN G N++V F W+ Q I+R + G R V V L Sbjct: 154 IFFYIIRAGGLGLNF-VGANVVVLFDPTWNPASDLQAIDR-----AYRIGQIRNVTVLRL 207 Query: 171 IAQNTIDELVLQRLRTKSTIQDLLL 195 I+ T++E++ R K +Q +L Sbjct: 208 ISLGTVEEVIYLRQVYKQQLQCSVL 232 >gi|326478744|gb|EGE02754.1| SNF2 family helicase/ATPase [Trichophyton equinum CBS 127.97] Length = 1188 Score = 80.0 bits (196), Expect = 2e-13, Method: Composition-based stats. Identities = 29/171 (16%), Positives = 65/171 (38%), Gaps = 20/171 (11%) Query: 40 VYYDEEKHWKEVHDEKIKALEVIIEKANAAPI--IVAYHFNSDLARLQKAFPQGRT---- 93 +Y K + + E + + PI ++ + S L ++ A + Sbjct: 1003 LYEGPHTKTKALISHLLDTAEDNKKSSCQPPIKSVIFSAWTSHLDLIEIALEENGLTGYT 1062 Query: 94 -------LDKDPCTIQEW-NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQ 145 L + +I+ + + + +L + G GLNL G+++ ++ Sbjct: 1063 RLDGTMSLKQRNASIETFSTDNNVTILLVTIGAGGVGLNLT-AGSMVYIMEPQYNPAAIA 1121 Query: 146 QMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 Q ++R+ + G R V I ++I+E + + + K + D+ LN Sbjct: 1122 QAVDRV-----HRIGQTREVTTIQFIMNDSIEEKITELAKRKQKLADMSLN 1167 >gi|326469727|gb|EGD93736.1| SNF2 family helicase/ATPase [Trichophyton tonsurans CBS 112818] Length = 1188 Score = 80.0 bits (196), Expect = 2e-13, Method: Composition-based stats. Identities = 29/171 (16%), Positives = 65/171 (38%), Gaps = 20/171 (11%) Query: 40 VYYDEEKHWKEVHDEKIKALEVIIEKANAAPI--IVAYHFNSDLARLQKAFPQGRT---- 93 +Y K + + E + + PI ++ + S L ++ A + Sbjct: 1003 LYEGPHTKTKALISHLLDTAEDNKKSSCQPPIKSVIFSAWTSHLDLIEIALEENGLTGYT 1062 Query: 94 -------LDKDPCTIQEW-NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQ 145 L + +I+ + + + +L + G GLNL G+++ ++ Sbjct: 1063 RLDGTMSLKQRNASIETFSTDNNVTILLVTIGAGGVGLNLT-AGSMVYIMEPQYNPAAIA 1121 Query: 146 QMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 Q ++R+ + G R V I ++I+E + + + K + D+ LN Sbjct: 1122 QAVDRV-----HRIGQTREVTTIQFIMNDSIEEKITELAKRKQKLADMSLN 1167 >gi|302653441|ref|XP_003018547.1| hypothetical protein TRV_07448 [Trichophyton verrucosum HKI 0517] gi|291182199|gb|EFE37902.1| hypothetical protein TRV_07448 [Trichophyton verrucosum HKI 0517] Length = 1186 Score = 80.0 bits (196), Expect = 2e-13, Method: Composition-based stats. Identities = 29/171 (16%), Positives = 65/171 (38%), Gaps = 20/171 (11%) Query: 40 VYYDEEKHWKEVHDEKIKALEVIIEKANAAPI--IVAYHFNSDLARLQKAFPQGRT---- 93 +Y K + + E + + PI ++ + S L ++ A + Sbjct: 1001 LYEGPHTKTKALISHLLDTAEDNKKSSCQPPIKSVIFSAWTSHLDLIEIALEENGLTGYA 1060 Query: 94 -------LDKDPCTIQEW-NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQ 145 L + +I+ + + + +L + G GLNL G+++ ++ Sbjct: 1061 RLDGTMSLKQRNASIETFSTDNNVTILLVTIGAGGVGLNLT-AGSMVYIMEPQYNPAAIA 1119 Query: 146 QMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 Q ++R+ + G R V I ++I+E + + + K + D+ LN Sbjct: 1120 QAVDRV-----HRIGQTREVTTIQFIMNDSIEEKITELAKRKQKLADMSLN 1165 >gi|241560242|ref|XP_002400839.1| DNA repair and recombination protein RAD54B, putative [Ixodes scapularis] gi|215499788|gb|EEC09282.1| DNA repair and recombination protein RAD54B, putative [Ixodes scapularis] Length = 614 Score = 80.0 bits (196), Expect = 2e-13, Method: Composition-based stats. Identities = 27/158 (17%), Positives = 59/158 (37%), Gaps = 19/158 (12%) Query: 52 HDEKIKALEVIIEKANAA--PIIVAYHFNSDLARLQKAF---------PQGRTLDKDPCT 100 K + L+ ++ + +++ F L L+ G T D Sbjct: 441 DSGKFRELDSVLSDSLKKNHRVLIFSQFTMVLDILEAYLNIRGHKWLRLDGATSVTDRQD 500 Query: 101 IQEWNEGKIPL--LFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQ 158 + + G + + G G+NL N++V + ++ +Q +R + Sbjct: 501 LIDKYNGDSSILAFLLSTRAGGQGINL-ASANVVVLHDVDFNPYNDKQAEDRC-----HR 554 Query: 159 AGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 G R VFV ++++TI+E +L + K ++ + Sbjct: 555 LGQSRDVFVIKFVSKDTIEEGILAIAKEKLKLEKDITE 592 >gi|327284355|ref|XP_003226904.1| PREDICTED: transcriptional regulator ATRX-like [Anolis carolinensis] Length = 2334 Score = 79.6 bits (195), Expect = 2e-13, Method: Composition-based stats. Identities = 39/202 (19%), Positives = 76/202 (37%), Gaps = 29/202 (14%) Query: 9 RELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKI---KALEVIIE- 64 ++ + E +E + L++A +E V + + +E +E Sbjct: 1843 KDFVTEADAEVLEHSGKMVLLFEILRMA------EELGDKVLVFSQSLISLDLIEDFLEL 1896 Query: 65 ----KANAAPIIVAY-----HFNS-DLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFA 114 K PI+ Y F + D RL + ++ K + + L Sbjct: 1897 ASRDKEEGKPIV--YKGEGKWFRNIDYYRLDGST-TAQSRKKWAEEFNDVTNVRGRLFII 1953 Query: 115 HPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQN 174 + G+NL N ++ F W+ Q I R+ + G +AVFVY +AQ Sbjct: 1954 STKAGSLGINL-VAANRVIIFDASWNPSYDIQSIFRV-----YRFGQTKAVFVYRFLAQG 2007 Query: 175 TIDELVLQRLRTKSTIQDLLLN 196 T+++ + R TK ++ +++ Sbjct: 2008 TMEDKIYDRQVTKQSLSFRVVD 2029 >gi|297671222|ref|XP_002813740.1| PREDICTED: helicase ARIP4-like isoform 2 [Pongo abelii] Length = 1161 Score = 79.6 bits (195), Expect = 2e-13, Method: Composition-based stats. Identities = 34/180 (18%), Positives = 67/180 (37%), Gaps = 39/180 (21%) Query: 52 HDEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQKAFPQGRT---------------- 93 + K+ L +IE++ I+V S LA +++ + Sbjct: 413 NSPKMVLLFHLIEESVNLGDKILVFSQSLSTLALIEEFLGKREVPCPPGAEGQGAQKWVR 472 Query: 94 ------LD------KDPCTIQEWNEGKIP---LLFAHPASCGHGLNLQYGGNILVFFSLW 138 LD + I ++N+ L + G+NL G N +V F Sbjct: 473 NITYFRLDGSTPAFERERLINQFNDPSNLTTWLFLLSTRAGCLGVNL-IGANRVVVFDAS 531 Query: 139 WDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNAL 198 W+ Q + R + G K+ ++Y L+A T+++ + R +K + D +++ L Sbjct: 532 WNPCHDAQAV-----CRVYRYGQKKPCYIYRLVADYTLEKKIYDRQISKQGMSDRVVDDL 586 >gi|297671220|ref|XP_002813739.1| PREDICTED: helicase ARIP4-like isoform 1 [Pongo abelii] Length = 1410 Score = 79.6 bits (195), Expect = 2e-13, Method: Composition-based stats. Identities = 34/180 (18%), Positives = 67/180 (37%), Gaps = 39/180 (21%) Query: 52 HDEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQKAFPQGRT---------------- 93 + K+ L +IE++ I+V S LA +++ + Sbjct: 662 NSPKMVLLFHLIEESVNLGDKILVFSQSLSTLALIEEFLGKREVPCPPGAEGQGAQKWVR 721 Query: 94 ------LD------KDPCTIQEWNEGKIP---LLFAHPASCGHGLNLQYGGNILVFFSLW 138 LD + I ++N+ L + G+NL G N +V F Sbjct: 722 NITYFRLDGSTPAFERERLINQFNDPSNLTTWLFLLSTRAGCLGVNL-IGANRVVVFDAS 780 Query: 139 WDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNAL 198 W+ Q + R + G K+ ++Y L+A T+++ + R +K + D +++ L Sbjct: 781 WNPCHDAQAV-----CRVYRYGQKKPCYIYRLVADYTLEKKIYDRQISKQGMSDRVVDDL 835 >gi|194389260|dbj|BAG65618.1| unnamed protein product [Homo sapiens] Length = 1161 Score = 79.6 bits (195), Expect = 2e-13, Method: Composition-based stats. Identities = 34/180 (18%), Positives = 67/180 (37%), Gaps = 39/180 (21%) Query: 52 HDEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQKAFPQGRT---------------- 93 + K+ L +IE++ I+V S LA +++ + Sbjct: 413 NSPKMVLLFHLIEESVKLGDKILVFSQSLSTLALIEEFLGKREVPCPPGTEGQGAQKWVR 472 Query: 94 ------LD------KDPCTIQEWNEGKIP---LLFAHPASCGHGLNLQYGGNILVFFSLW 138 LD + I ++N+ L + G+NL G N +V F Sbjct: 473 NISYFRLDGSTPAFERERLINQFNDPSNLTTWLFLLSTRAGCLGVNL-IGANRVVVFDAS 531 Query: 139 WDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNAL 198 W+ Q + R + G K+ ++Y L+A T+++ + R +K + D +++ L Sbjct: 532 WNPCHDAQAV-----CRVYRYGQKKPCYIYRLVADYTLEKKIYDRQISKQGMSDRVVDDL 586 >gi|168823443|ref|NP_055921.2| helicase ARIP4 [Homo sapiens] gi|296439458|sp|Q9Y4B4|ARIP4_HUMAN RecName: Full=Helicase ARIP4; AltName: Full=Androgen receptor-interacting protein 4; AltName: Full=RAD54-like protein 2 Length = 1467 Score = 79.6 bits (195), Expect = 2e-13, Method: Composition-based stats. Identities = 34/180 (18%), Positives = 67/180 (37%), Gaps = 39/180 (21%) Query: 52 HDEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQKAFPQGRT---------------- 93 + K+ L +IE++ I+V S LA +++ + Sbjct: 719 NSPKMVLLFHLIEESVKLGDKILVFSQSLSTLALIEEFLGKREVPCPPGTEGQGAQKWVR 778 Query: 94 ------LD------KDPCTIQEWNEGKIP---LLFAHPASCGHGLNLQYGGNILVFFSLW 138 LD + I ++N+ L + G+NL G N +V F Sbjct: 779 NISYFRLDGSTPAFERERLINQFNDPSNLTTWLFLLSTRAGCLGVNL-IGANRVVVFDAS 837 Query: 139 WDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNAL 198 W+ Q + R + G K+ ++Y L+A T+++ + R +K + D +++ L Sbjct: 838 WNPCHDAQAV-----CRVYRYGQKKPCYIYRLVADYTLEKKIYDRQISKQGMSDRVVDDL 892 >gi|119585552|gb|EAW65148.1| hCG1997495, isoform CRA_d [Homo sapiens] Length = 1415 Score = 79.6 bits (195), Expect = 2e-13, Method: Composition-based stats. Identities = 34/180 (18%), Positives = 67/180 (37%), Gaps = 39/180 (21%) Query: 52 HDEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQKAFPQGRT---------------- 93 + K+ L +IE++ I+V S LA +++ + Sbjct: 667 NSPKMVLLFHLIEESVKLGDKILVFSQSLSTLALIEEFLGKREVPCPPGTEGQGAQKWVR 726 Query: 94 ------LD------KDPCTIQEWNEGKIP---LLFAHPASCGHGLNLQYGGNILVFFSLW 138 LD + I ++N+ L + G+NL G N +V F Sbjct: 727 NISYFRLDGSTPAFERERLINQFNDPSNLTTWLFLLSTRAGCLGVNL-IGANRVVVFDAS 785 Query: 139 WDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNAL 198 W+ Q + R + G K+ ++Y L+A T+++ + R +K + D +++ L Sbjct: 786 WNPCHDAQAV-----CRVYRYGQKKPCYIYRLVADYTLEKKIYDRQISKQGMSDRVVDDL 840 >gi|114587116|ref|XP_001169759.1| PREDICTED: RAD54-like 2 isoform 1 [Pan troglodytes] gi|114587118|ref|XP_001169781.1| PREDICTED: RAD54-like 2 isoform 2 [Pan troglodytes] Length = 1467 Score = 79.6 bits (195), Expect = 2e-13, Method: Composition-based stats. Identities = 34/180 (18%), Positives = 67/180 (37%), Gaps = 39/180 (21%) Query: 52 HDEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQKAFPQGRT---------------- 93 + K+ L +IE++ I+V S LA +++ + Sbjct: 719 NSPKMVLLFHLIEESVKLGDKILVFSQSLSTLALIEEFLGKREVPCPPGAEGQGAQKWVR 778 Query: 94 ------LD------KDPCTIQEWNEGKIP---LLFAHPASCGHGLNLQYGGNILVFFSLW 138 LD + I ++N+ L + G+NL G N +V F Sbjct: 779 NISYFRLDGSTPAFERERLINQFNDPSNLTTWLFLLSTRAGCLGVNL-IGANRVVVFDAS 837 Query: 139 WDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNAL 198 W+ Q + R + G K+ ++Y L+A T+++ + R +K + D +++ L Sbjct: 838 WNPCHDAQAV-----CRVYRYGQKKPCYIYRLVADYTLEKKIYDRQISKQGMSDRVVDDL 892 >gi|109039362|ref|XP_001096767.1| PREDICTED: helicase ARIP4 [Macaca mulatta] Length = 1467 Score = 79.6 bits (195), Expect = 2e-13, Method: Composition-based stats. Identities = 34/180 (18%), Positives = 67/180 (37%), Gaps = 39/180 (21%) Query: 52 HDEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQKAFPQGRT---------------- 93 + K+ L +IE++ I+V S LA +++ + Sbjct: 719 NSPKMVLLFHLIEESVKLGDKILVFSQSLSTLALIEEFLGKREVPCPPGAEGQGAQKWVR 778 Query: 94 ------LD------KDPCTIQEWNEGKIP---LLFAHPASCGHGLNLQYGGNILVFFSLW 138 LD + I ++N+ L + G+NL G N +V F Sbjct: 779 NISYFRLDGSTPAFERERLINQFNDPSNLTTWLFLLSTRAGCLGVNL-IGANRVVVFDAS 837 Query: 139 WDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNAL 198 W+ Q + R + G K+ ++Y L+A T+++ + R +K + D +++ L Sbjct: 838 WNPCHDAQAV-----CRVYRYGQKKPCYIYRLVADYTLEKKIYDRQISKQGMSDRVVDDL 892 >gi|18999468|gb|AAH24298.1| RAD54-like 2 (S. cerevisiae) [Homo sapiens] gi|123982750|gb|ABM83116.1| RAD54-like 2 (S. cerevisiae) [synthetic construct] gi|123997421|gb|ABM86312.1| RAD54-like 2 (S. cerevisiae) [synthetic construct] Length = 1359 Score = 79.6 bits (195), Expect = 2e-13, Method: Composition-based stats. Identities = 34/180 (18%), Positives = 67/180 (37%), Gaps = 39/180 (21%) Query: 52 HDEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQKAFPQGRT---------------- 93 + K+ L +IE++ I+V S LA +++ + Sbjct: 611 NSPKMVLLFHLIEESVKLGDKILVFSQSLSTLALIEEFLGKREVPCPPGTEGQGAQKWVR 670 Query: 94 ------LD------KDPCTIQEWNEGKIP---LLFAHPASCGHGLNLQYGGNILVFFSLW 138 LD + I ++N+ L + G+NL G N +V F Sbjct: 671 NISYFRLDGSTPAFERERLINQFNDPSNLTTWLFLLSTRAGCLGVNL-IGANRVVVFDAS 729 Query: 139 WDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNAL 198 W+ Q + R + G K+ ++Y L+A T+++ + R +K + D +++ L Sbjct: 730 WNPCHDAQAV-----CRVYRYGQKKPCYIYRLVADYTLEKKIYDRQISKQGMSDRVVDDL 784 >gi|20521664|dbj|BAA34529.2| KIAA0809 protein [Homo sapiens] Length = 1385 Score = 79.6 bits (195), Expect = 2e-13, Method: Composition-based stats. Identities = 34/180 (18%), Positives = 67/180 (37%), Gaps = 39/180 (21%) Query: 52 HDEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQKAFPQGRT---------------- 93 + K+ L +IE++ I+V S LA +++ + Sbjct: 637 NSPKMVLLFHLIEESVKLGDKILVFSQSLSTLALIEEFLGKREVPCPPGTEGQGAQKWVR 696 Query: 94 ------LD------KDPCTIQEWNEGKIP---LLFAHPASCGHGLNLQYGGNILVFFSLW 138 LD + I ++N+ L + G+NL G N +V F Sbjct: 697 NISYFRLDGSTPAFERERLINQFNDPSNLTTWLFLLSTRAGCLGVNL-IGANRVVVFDAS 755 Query: 139 WDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNAL 198 W+ Q + R + G K+ ++Y L+A T+++ + R +K + D +++ L Sbjct: 756 WNPCHDAQAV-----CRVYRYGQKKPCYIYRLVADYTLEKKIYDRQISKQGMSDRVVDDL 810 >gi|39971679|ref|XP_367230.1| hypothetical protein MGG_07155 [Magnaporthe oryzae 70-15] gi|145019630|gb|EDK03858.1| hypothetical protein MGG_07155 [Magnaporthe oryzae 70-15] Length = 1096 Score = 79.6 bits (195), Expect = 2e-13, Method: Composition-based stats. Identities = 25/169 (14%), Positives = 63/169 (37%), Gaps = 19/169 (11%) Query: 41 YYDEEKHWKEVHDEKIKALE--VIIEKANAAPIIVAYHFNSDLARLQKAFPQGRT----- 93 Y + + ++ + A ++ +V + S L ++ A + Sbjct: 906 YTGPHTKTRALVEDLLSAKAHSELMPDEPPIKSVVFSGWTSHLDLIEIALDKAGITHTRL 965 Query: 94 ------LDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQM 147 L + + + + ++ + G GLNL G ++ V ++ Q Sbjct: 966 DGKMSRLARTQAMDRFREDPSVHVILVSIMAGGLGLNLTAGNHVYVM-EPQYNPAAEAQA 1024 Query: 148 IERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 ++R+ + G KR V + I +N+ +E ++ + K + +L ++ Sbjct: 1025 VDRV-----HRLGQKRPVRIIRYIMENSFEEQMVALQQKKIKLANLSMD 1068 >gi|196010103|ref|XP_002114916.1| hypothetical protein TRIADDRAFT_58909 [Trichoplax adhaerens] gi|190582299|gb|EDV22372.1| hypothetical protein TRIADDRAFT_58909 [Trichoplax adhaerens] Length = 1351 Score = 79.6 bits (195), Expect = 2e-13, Method: Composition-based stats. Identities = 25/116 (21%), Positives = 46/116 (39%), Gaps = 9/116 (7%) Query: 85 QKAFPQGRTLDKDP-CTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDL 141 + G T +D + +N P + + G GLNLQ + +V F W+ Sbjct: 879 RYLRLDGTTKAEDRGQLLALFNAENSPYFIFLLSTRAGGLGLNLQ-SADTVVIFDSDWNP 937 Query: 142 EEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + Q R + G + V V L+ +++E +L R K + + ++ A Sbjct: 938 HQDLQA-----QDRAHRIGQQNEVRVLRLMTVQSVEEKILAAARYKLNVDEKVIQA 988 >gi|289577895|ref|YP_003476522.1| SNF2-related protein [Thermoanaerobacter italicus Ab9] gi|289527608|gb|ADD01960.1| SNF2-related protein [Thermoanaerobacter italicus Ab9] Length = 931 Score = 79.6 bits (195), Expect = 2e-13, Method: Composition-based stats. Identities = 33/213 (15%), Positives = 76/213 (35%), Gaps = 30/213 (14%) Query: 7 FQRELYCDLQGENIE---AFNSASKTVKCLQLANGAVYYDEEKHWKEV----HDEKIKAL 59 Q +LYC L + + + K ++L +E K++ L Sbjct: 700 LQEKLYCQLIEDYKNKGKSESPLGVLQKLMELCAHPRLVRDEGEVNTFQLLSESGKLQRL 759 Query: 60 EVIIEKAN--AAPIIVAYHFNSDLARLQKAF----------PQGRTLDKDPCTIQEWNEG 107 ++ + ++ H+ A L+K G I ++ E Sbjct: 760 IELLNEIKRRGEKAVIFTHYIKMQAILRKVIMDVFGINCPVINGSIKGDRMNVIDKFKES 819 Query: 108 K-IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVF 166 ++ + G G+ + N ++ ++ W+ +Q +R+ + G R V Sbjct: 820 SGFGVIILSTRAAGVGITITEANN-VIHYTRDWNPAVEKQATDRV-----YRIGQTREVN 873 Query: 167 VYYLIAQN----TIDELVLQRLRTKSTIQDLLL 195 +YY I + T++E + + L+ K + + ++ Sbjct: 874 IYYPICISSRGKTVEERLNEVLQKKLQLLNEVI 906 >gi|296419114|ref|XP_002839164.1| hypothetical protein [Tuber melanosporum Mel28] gi|295635170|emb|CAZ83355.1| unnamed protein product [Tuber melanosporum] Length = 759 Score = 79.6 bits (195), Expect = 2e-13, Method: Composition-based stats. Identities = 25/149 (16%), Positives = 46/149 (30%), Gaps = 29/149 (19%) Query: 68 AAPIIVAYHFNSDLARLQKAFP---------QGRTLDKDPCTIQEWNEGK---------- 108 IV F S L ++ G + D G+ Sbjct: 520 KNKTIVFSQFTSMLDLIEPFLHRNGIAFTRYDGSMKNDDREASLRRLRGEGEYAPSPGKE 579 Query: 109 ----IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA 164 +L GLNL +++ +W+ +Q I+R+ + G + Sbjct: 580 DRSWCGVLLCSLKCGALGLNLTAACRVVIL-EPFWNPFVEEQAIDRV-----HRIGQETD 633 Query: 165 VFVYYLIAQNTIDELVLQRLRTKSTIQDL 193 V VY + +++E +LQ K + Sbjct: 634 VVVYKITVAGSVEERILQLQDQKRELAKA 662 >gi|167535565|ref|XP_001749456.1| hypothetical protein [Monosiga brevicollis MX1] gi|163772084|gb|EDQ85741.1| predicted protein [Monosiga brevicollis MX1] Length = 1326 Score = 79.6 bits (195), Expect = 2e-13, Method: Composition-based stats. Identities = 23/153 (15%), Positives = 50/153 (32%), Gaps = 31/153 (20%) Query: 69 APIIVAYHFNSDLARLQKAFPQGRTLDKDP---------------------CTIQEWNEG 107 +++ L L++ + + + I+++N+ Sbjct: 836 EKVLIFSQSIPALDLLEQYLARVNVPNSNERWEKDKHYFRLDGSTHATSRTKLIEDFNDT 895 Query: 108 KIP----LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKR 163 + L + G+NL N +V W+ Q + R + G R Sbjct: 896 DVNDNCHLFLLSTRAGSLGINLT-AANRVVILDASWNPTHDSQAV-----CRVYRYGQSR 949 Query: 164 AVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 +Y LIA T++E + R K + +++ Sbjct: 950 NCHIYRLIASGTMEETIYNRQIHKLGLSQRVVD 982 >gi|164659870|ref|XP_001731059.1| hypothetical protein MGL_2058 [Malassezia globosa CBS 7966] gi|159104957|gb|EDP43845.1| hypothetical protein MGL_2058 [Malassezia globosa CBS 7966] Length = 526 Score = 79.6 bits (195), Expect = 2e-13, Method: Composition-based stats. Identities = 23/119 (19%), Positives = 52/119 (43%), Gaps = 9/119 (7%) Query: 84 LQKAFPQGRTL-DKDPCTIQEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWD 140 ++ G T D ++++N+ + + + G GLNLQ + ++ + W+ Sbjct: 13 IKYLRLDGSTKPDDRSVLLRQFNDPNSEYDVFIRSTRAGGLGLNLQ-SADTVIIYDSDWN 71 Query: 141 LEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 + Q R + G K V + L+ + ++++ +L R ++K I ++ A K Sbjct: 72 PHQDLQA-----QDRAHRIGQKVEVRILRLVTEKSVEKTILARAQSKLEINGKVIQAGK 125 >gi|291526268|emb|CBK91855.1| Superfamily II DNA/RNA helicases, SNF2 family [Eubacterium rectale DSM 17629] Length = 559 Score = 79.6 bits (195), Expect = 2e-13, Method: Composition-based stats. Identities = 34/208 (16%), Positives = 78/208 (37%), Gaps = 26/208 (12%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEV 61 KQY + + D++ + + N + T++ QL +G ++ K+ ++ Sbjct: 349 KQYRDIKNGIVADME-NILASVNPLNCTLRLRQLTSGNPNLTDD-------SPKLDRIKE 400 Query: 62 IIEKA---NAAPIIVAYHFNSDLARLQKAFPQGRTL--------DKDPCTIQEWN-EGKI 109 ++E+ N I+ +++ L + + ++ + + Sbjct: 401 MLEEEIIPNGHKAIIFSQWSTIAKDLGIELSEYDPIVITGEVHPEQRQKLVDNFQTNPHC 460 Query: 110 PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYY 169 + + G GL L + + F W+ ++ Q +R + G AV V Sbjct: 461 KVAIGTIGAMGTGLTL-NKASYVFFMDKAWNSGDNAQAEDR-----AHRIGTVGAVNVIS 514 Query: 170 LIAQNTIDELVLQRLRTKSTIQDLLLNA 197 ++A+ TIDE V L + D +++ Sbjct: 515 MVAKGTIDEAVEDYLLENKDLIDRVVDG 542 >gi|197308128|gb|ACH60415.1| Swi2/Snf2-related chromatin remodeling ATPase [Pseudotsuga menziesii] gi|197308130|gb|ACH60416.1| Swi2/Snf2-related chromatin remodeling ATPase [Pseudotsuga menziesii] gi|197308132|gb|ACH60417.1| Swi2/Snf2-related chromatin remodeling ATPase [Pseudotsuga menziesii] gi|197308134|gb|ACH60418.1| Swi2/Snf2-related chromatin remodeling ATPase [Pseudotsuga menziesii] gi|197308136|gb|ACH60419.1| Swi2/Snf2-related chromatin remodeling ATPase [Pseudotsuga menziesii] gi|197308138|gb|ACH60420.1| Swi2/Snf2-related chromatin remodeling ATPase [Pseudotsuga menziesii] gi|197308140|gb|ACH60421.1| Swi2/Snf2-related chromatin remodeling ATPase [Pseudotsuga menziesii] gi|197308142|gb|ACH60422.1| Swi2/Snf2-related chromatin remodeling ATPase [Pseudotsuga menziesii] gi|197308144|gb|ACH60423.1| Swi2/Snf2-related chromatin remodeling ATPase [Pseudotsuga menziesii] gi|197308146|gb|ACH60424.1| Swi2/Snf2-related chromatin remodeling ATPase [Pseudotsuga menziesii] gi|197308148|gb|ACH60425.1| Swi2/Snf2-related chromatin remodeling ATPase [Pseudotsuga menziesii] gi|197308150|gb|ACH60426.1| Swi2/Snf2-related chromatin remodeling ATPase [Pseudotsuga menziesii] gi|197308152|gb|ACH60427.1| Swi2/Snf2-related chromatin remodeling ATPase [Pseudotsuga menziesii] gi|197308154|gb|ACH60428.1| Swi2/Snf2-related chromatin remodeling ATPase [Pseudotsuga menziesii] gi|197308156|gb|ACH60429.1| Swi2/Snf2-related chromatin remodeling ATPase [Pseudotsuga menziesii] gi|197308158|gb|ACH60430.1| Swi2/Snf2-related chromatin remodeling ATPase [Pseudotsuga menziesii] Length = 73 Score = 79.6 bits (195), Expect = 2e-13, Method: Composition-based stats. Identities = 15/79 (18%), Positives = 35/79 (44%), Gaps = 8/79 (10%) Query: 101 IQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQ 158 I+++N+ + + G G+NL + + + W+ + Q ++R + Sbjct: 1 IKDFNDPDSKFCIFLLSTRAGGLGINLT-AADTCIIYDSDWNPQMDMQAMDRC-----HR 54 Query: 159 AGFKRAVFVYYLIAQNTID 177 G + V VY LI ++++ Sbjct: 55 IGQTKPVHVYRLITAHSVE 73 >gi|301062743|ref|ZP_07203355.1| SNF2 family N-terminal domain protein [delta proteobacterium NaphS2] gi|300443150|gb|EFK07303.1| SNF2 family N-terminal domain protein [delta proteobacterium NaphS2] Length = 896 Score = 79.6 bits (195), Expect = 2e-13, Method: Composition-based stats. Identities = 29/180 (16%), Positives = 66/180 (36%), Gaps = 25/180 (13%) Query: 33 LQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKA---NAAPIIVAYHFNSDLARLQKAFP 89 +++ + Y + K K+ L +I++ + +++ + + + + Sbjct: 581 MRMVCDSTYLIDRKTHV---SPKLTELASVIDELVIESKRKMVIFSEWTTMTFLIARHLS 637 Query: 90 QGRT----------LDKDPCTIQEW-NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLW 138 + + K I E+ N + + G GLNLQ + +V F L Sbjct: 638 EVGIPFVELSGKIPVKKRQSLIDEFTNNPDCRVFL-STDAGGTGLNLQ-AADCVVNFELP 695 Query: 139 WDLEEHQQMIERIGVTRQRQAGFKRAVF-VYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 W+ + Q I R+ + G K V I + T++E + ++ K+ + + Sbjct: 696 WNPAKLNQRIGRVS-----RIGQKSQCINVVNFICKGTVEEKIFAGIQLKTELFKGVFEG 750 >gi|302658649|ref|XP_003021026.1| SNF2 family helicase/ATPase, putative [Trichophyton verrucosum HKI 0517] gi|291184901|gb|EFE40408.1| SNF2 family helicase/ATPase, putative [Trichophyton verrucosum HKI 0517] Length = 1932 Score = 79.6 bits (195), Expect = 2e-13, Method: Composition-based stats. Identities = 24/157 (15%), Positives = 61/157 (38%), Gaps = 18/157 (11%) Query: 52 HDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARL---------QKAFPQGRT-LDKDPC 99 + + + + I++++ I++ + L+ L + G+T + Sbjct: 1312 NSHRTQMVGQIVDESIKAGDKILIFSGYLHTLSYLGSMLEARGHKYCRLDGKTPIATRQA 1371 Query: 100 TIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQA 159 +++ + + + GLN+ G N ++ F ++ +Q I R + Sbjct: 1372 ATRDFTDSDAHVYLISTKAGALGLNI-IGANRVIIFESEYNPTWEEQAIGR-----AYRL 1425 Query: 160 GFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 G + VFVY + T +EL+ ++ K + ++ Sbjct: 1426 GQTKDVFVYRFVMGGTFEELIHEKGVFKKNMALRAID 1462 >gi|115781768|ref|XP_783354.2| PREDICTED: similar to steroid receptor-interacting SNF2 domain protein [Strongylocentrotus purpuratus] gi|115939876|ref|XP_001181420.1| PREDICTED: similar to steroid receptor-interacting SNF2 domain protein [Strongylocentrotus purpuratus] Length = 1637 Score = 79.6 bits (195), Expect = 2e-13, Method: Composition-based stats. Identities = 32/181 (17%), Positives = 62/181 (34%), Gaps = 39/181 (21%) Query: 55 KIKALEVIIEKA--NAAPIIVAYHFNSDLARLQKAFPQGRT------------------- 93 KI L I+E++ I+V S L+ ++K + Sbjct: 809 KIIVLFHILEESIRLGDKILVFSQSLSCLSVIEKFLAKSTIPQPPNPPPLMPREWVRNQT 868 Query: 94 ---------LDKDPCTIQEWNEGK---IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDL 141 + + I +N I L + G+NL G N +V W+ Sbjct: 869 YFRLDGSTAVSEREKMINRFNSPDNKTIMLFLLSTKAGCLGINL-IGANRVVVMDASWNP 927 Query: 142 EEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 Q + R + G + VY L++ T+++ + R +K + D +++ + E Sbjct: 928 CHDAQAV-----CRVYRYGQTKKCHVYRLVSDQTLEKKIYDRQISKKGMSDRVVDEMNPE 982 Query: 202 T 202 Sbjct: 983 M 983 >gi|118400670|ref|XP_001032657.1| Helicase conserved C-terminal domain containing protein [Tetrahymena thermophila] gi|89287000|gb|EAR84994.1| Helicase conserved C-terminal domain containing protein [Tetrahymena thermophila SB210] Length = 1326 Score = 79.6 bits (195), Expect = 2e-13, Method: Composition-based stats. Identities = 29/169 (17%), Positives = 62/169 (36%), Gaps = 22/169 (13%) Query: 48 WKEVHDEKIKALEVIIEKANAA--PIIVAYHFNSDLARLQKAFP----------QGRTLD 95 ++E K+ A++ +E + +I+ H L R++K G Sbjct: 286 YQETGLAKLDAVKEYLEDLMDSQVKLIIFAHHQQVLDRIEKMVKCDFRRQYIRIDGNVKQ 345 Query: 96 KDPCTI--QEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEH-QQMIERIG 152 ++ + Q N K + + HG+ L +++ E + + Sbjct: 346 EERVDLVNQFQNNTKTTVAILSLQAASHGITLTASSHVIF-------AELYPTPAVMLQA 398 Query: 153 VTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 R + V +YLI ++T+DE + L K + +L+ +K+ Sbjct: 399 EDRSHRINQNNNVLCHYLIGKDTVDEDIFNLLMQKYKVTSSILDGQRKD 447 >gi|312377807|gb|EFR24547.1| hypothetical protein AND_10782 [Anopheles darlingi] Length = 866 Score = 79.6 bits (195), Expect = 2e-13, Method: Composition-based stats. Identities = 32/142 (22%), Positives = 60/142 (42%), Gaps = 17/142 (11%) Query: 56 IKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAH 115 + ALE + ++ A + + + L R + + L+KD + E ++ Sbjct: 723 LSALEPVYKEEEEA--FLYWWCKTPLGR-----RRSKQLEKDHEAMMEMEN----IMLLS 771 Query: 116 PASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNT 175 + G GLNL G N L W+ + Q +RI + G + V+++ I Q T Sbjct: 772 LTAGGVGLNL-VGANHLFLLDPHWNPQLEAQAQDRI-----YRVGQTKPVYIWKFICQET 825 Query: 176 IDELVLQRLRTKSTIQDLLLNA 197 +++ +L + K I D +L Sbjct: 826 VEQKILALQQHKLEIADGVLTG 847 >gi|327300655|ref|XP_003235020.1| hypothetical protein TERG_04072 [Trichophyton rubrum CBS 118892] gi|326462372|gb|EGD87825.1| hypothetical protein TERG_04072 [Trichophyton rubrum CBS 118892] Length = 1877 Score = 79.6 bits (195), Expect = 2e-13, Method: Composition-based stats. Identities = 24/157 (15%), Positives = 61/157 (38%), Gaps = 18/157 (11%) Query: 52 HDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARL---------QKAFPQGRT-LDKDPC 99 + + + + I++++ I++ + L+ L + G+T + Sbjct: 1311 NSHRTQMVGQIVDESIKAGDKILIFSGYLHTLSYLGSMLDARGHKYCRLDGKTPIATRQA 1370 Query: 100 TIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQA 159 +++ + + + GLN+ G N ++ F ++ +Q I R + Sbjct: 1371 ATRDFRDSDAHVYLISTKAGALGLNI-IGANRVIIFESEYNPTWEEQAIGR-----AYRL 1424 Query: 160 GFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 G + VFVY + T +EL+ ++ K + ++ Sbjct: 1425 GQTKDVFVYRFVMGGTFEELIHEKGIFKKNMALRAID 1461 >gi|296005042|ref|XP_002808858.1| DNA helicase, putative [Plasmodium falciparum 3D7] gi|225632255|emb|CAX64136.1| DNA helicase, putative [Plasmodium falciparum 3D7] Length = 1221 Score = 79.6 bits (195), Expect = 2e-13, Method: Composition-based stats. Identities = 23/99 (23%), Positives = 43/99 (43%), Gaps = 7/99 (7%) Query: 96 KDPCTIQEWNEGK-IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 + I+ +++ + I + + G GLNL N ++ W+ +R Sbjct: 1109 ERQKIIKRFSKDENIFVFLLSTKAGGVGLNL-IAANHVILMDQDWNPH-----NDRQAED 1162 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDL 193 R + G K VF+Y L +NTI+E +L+ + K + Sbjct: 1163 RVHRLGQKNEVFIYRLCCKNTIEEAILKCNKAKLHLDQA 1201 >gi|168062755|ref|XP_001783343.1| SWI/SNF class chromatin remodeling complex protein [Physcomitrella patens subsp. patens] gi|162665144|gb|EDQ51838.1| SWI/SNF class chromatin remodeling complex protein [Physcomitrella patens subsp. patens] Length = 2174 Score = 79.6 bits (195), Expect = 2e-13, Method: Composition-based stats. Identities = 25/149 (16%), Positives = 49/149 (32%), Gaps = 18/149 (12%) Query: 61 VIIEKANAAPIIVAYHFNSDLARLQKAFP---------QGRTLDKDPCT-IQEWNEG--K 108 ++ ++ L ++ G T + IQ++N + Sbjct: 1813 SLMTSRKGHSVLFFSTMTRLLDVMEDYLEWKGYKYLRLDGSTGGSERGALIQDFNAPQSE 1872 Query: 109 IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVY 168 + + G G+NLQ + ++ F W+ + Q R + G KR V V Sbjct: 1873 AFIFLLSIRAGGIGINLQ-AADTVIIFDTDWNPQVDLQAQAR-----AHRIGQKRDVLVL 1926 Query: 169 YLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 +I+E V K + + + A Sbjct: 1927 RFETVKSIEEHVRASAEYKLGVANQSITA 1955 >gi|260809914|ref|XP_002599749.1| hypothetical protein BRAFLDRAFT_205765 [Branchiostoma floridae] gi|229285031|gb|EEN55761.1| hypothetical protein BRAFLDRAFT_205765 [Branchiostoma floridae] Length = 1002 Score = 79.6 bits (195), Expect = 2e-13, Method: Composition-based stats. Identities = 23/118 (19%), Positives = 45/118 (38%), Gaps = 8/118 (6%) Query: 86 KAFPQGRTLDKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEE 143 G + I ++N P L + G+NL G N +V F W+ Sbjct: 680 YRLDGGTSGQDREKMINQFNVPNSPTWLFLLSTRAGCLGVNL-VGANRVVVFDASWNPCH 738 Query: 144 HQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 Q + R + G + +Y L+ ++++ + R K + D +++ L+ E Sbjct: 739 DCQAV-----CRVYRYGQTKPCHIYRLVTDKSLEKKIYDRQVNKQGMSDRVVDELQPE 791 >gi|308494324|ref|XP_003109351.1| hypothetical protein CRE_08005 [Caenorhabditis remanei] gi|308246764|gb|EFO90716.1| hypothetical protein CRE_08005 [Caenorhabditis remanei] Length = 880 Score = 79.6 bits (195), Expect = 3e-13, Method: Composition-based stats. Identities = 27/122 (22%), Positives = 47/122 (38%), Gaps = 8/122 (6%) Query: 76 HFNSDLARLQKAFPQGRTLDK-DPCTIQEWNEG-KIPLLFAHPASCGHGLNLQYGGNILV 133 L ++ A G T P I+++ E I + + G GLNL N ++ Sbjct: 470 WVRIALKIIRHASLTGSTTAAARPKIIKKFEEDADIKVFLMTTRAGGLGLNLTC-ANKVI 528 Query: 134 FFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDL 193 F W+ + Q RI + G + V + LI+ T+++ + K + Sbjct: 529 IFDPDWNPQADNQAKNRI-----YRMGQENDVSIVRLISNGTLEDRKFFKQVQKEMLAAQ 583 Query: 194 LL 195 LL Sbjct: 584 LL 585 >gi|302505719|ref|XP_003014566.1| SNF2 family helicase/ATPase, putative [Arthroderma benhamiae CBS 112371] gi|291178387|gb|EFE34177.1| SNF2 family helicase/ATPase, putative [Arthroderma benhamiae CBS 112371] Length = 1862 Score = 79.6 bits (195), Expect = 3e-13, Method: Composition-based stats. Identities = 24/157 (15%), Positives = 60/157 (38%), Gaps = 18/157 (11%) Query: 52 HDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARL---------QKAFPQGRT-LDKDPC 99 + + + + I++++ I++ + L+ L + G+T + Sbjct: 1312 NSHRTQMVGQIVDESIKAGDKILIFSGYLHTLSYLGSMLEARGHKYCRLDGKTPIATRQA 1371 Query: 100 TIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQA 159 +++ + + GLN+ G N ++ F ++ +Q I R + Sbjct: 1372 ATRDFTASDAHVYLISTKAGALGLNI-IGANRVIIFESEYNPTWEEQAIGR-----AYRL 1425 Query: 160 GFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 G + VFVY + T +EL+ ++ K + ++ Sbjct: 1426 GQTKDVFVYRFVMGGTFEELIHEKGVFKKNMALRAID 1462 >gi|195387391|ref|XP_002052379.1| GJ22014 [Drosophila virilis] gi|194148836|gb|EDW64534.1| GJ22014 [Drosophila virilis] Length = 267 Score = 79.6 bits (195), Expect = 3e-13, Method: Composition-based stats. Identities = 35/154 (22%), Positives = 64/154 (41%), Gaps = 14/154 (9%) Query: 47 HWKEVHDEKIKALEVIIEKANAAPIIVAYHFNS-DLARLQKAFPQGRTLDKDPCTIQEWN 105 + E +KI + ++E ++ + N D RL P+ + I+ +N Sbjct: 34 NVVEYFFKKITESDELLEDIPSSYKVSNTWINGQDYYRLDGKTPK----NIRHEMIKRFN 89 Query: 106 ---EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFK 162 + + + G G+NL G N ++ W+ QQ I RI + G K Sbjct: 90 SEANRRARVFLISAKAGGQGINL-IGANRVIILDTSWNPSNDQQNIFRIF-----RLGQK 143 Query: 163 RAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + ++Y LIA T++E V R TK + +++ Sbjct: 144 KNCYIYRLIAMGTMEEKVYSRSVTKQAMSFRVVD 177 >gi|328854430|gb|EGG03562.1| hypothetical protein MELLADRAFT_89936 [Melampsora larici-populina 98AG31] Length = 767 Score = 79.6 bits (195), Expect = 3e-13, Method: Composition-based stats. Identities = 15/143 (10%), Positives = 51/143 (35%), Gaps = 17/143 (11%) Query: 64 EKANAAPIIVAYHFNSDLARL-----------QKAFPQGRTLDKDPCTIQEWNEGKIPLL 112 + ++ + S + + ++ T ++ + + Sbjct: 594 KSHGGGKSVIYTQWKSFIDWIIMAFDNSGITYRQLHGDQSTFERTSQLNSFTKDPNVEAF 653 Query: 113 FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIA 172 + G GLN+ + + W+ + QQ ++R+ + G + V V++++ Sbjct: 654 VVSIEAGGVGLNMTC-ADEVYLMDAHWNPQVVQQAVDRL-----HRIGQAKPVRVFHVVT 707 Query: 173 QNTIDELVLQRLRTKSTIQDLLL 195 +I++ + + K+ + ++ Sbjct: 708 GQSIEQHLYNVQKRKAALAKRVI 730 >gi|321265706|ref|XP_003197569.1| helicase domain DNA excision repair protein (Rad26L) [Cryptococcus gattii WM276] gi|317464049|gb|ADV25782.1| Helicase domain DNA excision repair protein (Rad26L), putative [Cryptococcus gattii WM276] Length = 1016 Score = 79.6 bits (195), Expect = 3e-13, Method: Composition-based stats. Identities = 27/101 (26%), Positives = 40/101 (39%), Gaps = 15/101 (14%) Query: 96 KDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGV 153 + I + + + ++ + G GLNL N +V F W + Sbjct: 676 ERQEMIDRFQDREKDHFIMLISTRAGGVGLNLT-AANKVVIFDPSWTM------------ 722 Query: 154 TRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 R + G KR V VY LI Q TI+EL+ +R K L Sbjct: 723 DRAFRIGQKRTVEVYRLIGQGTIEELIYERQVQKQQSARQL 763 >gi|195028444|ref|XP_001987086.1| GH20163 [Drosophila grimshawi] gi|193903086|gb|EDW01953.1| GH20163 [Drosophila grimshawi] Length = 1645 Score = 79.6 bits (195), Expect = 3e-13, Method: Composition-based stats. Identities = 20/102 (19%), Positives = 43/102 (42%), Gaps = 7/102 (6%) Query: 96 KDPCTIQEWNEGK-IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 + + E+N + I L + G+NL G N ++ F W+ Q + RI Sbjct: 1046 ERERLVNEFNANRNIKLFLISTRAGSLGINLT-GANRVIIFDASWNPCHDTQAVYRI--- 1101 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + G + +VY ++ +++ + R K + D +++ Sbjct: 1102 --YRYGQTKQCYVYRIVMDKCLEKKIYDRQIKKQGMSDRIVD 1141 >gi|156550927|ref|XP_001603100.1| PREDICTED: similar to transcriptional regulator ATRX (X-linked helicase II) [Nasonia vitripennis] Length = 1283 Score = 79.6 bits (195), Expect = 3e-13, Method: Composition-based stats. Identities = 32/181 (17%), Positives = 58/181 (32%), Gaps = 43/181 (23%) Query: 53 DEKIKALEVIIEKAN--AAPIIVAYH-------FNSDLARLQKAFPQGRT---------- 93 K+ L I++++ ++V L + G Sbjct: 833 STKLSLLFGILKESEQIGDKVLVFSQSLYSLTLIEHFLNLIDNQTQDGGEAENLDNHTGT 892 Query: 94 ---------LDKDPCTIQE------WNEGKIP---LLFAHPASCGHGLNLQYGGNILVFF 135 LD +N K L + G G+NL N ++ F Sbjct: 893 WALGLDYFRLDGSTSAENRSAWCKIFNNPKNTRARLFLISTRAGGLGINLT-AANRVIIF 951 Query: 136 SLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 W+ Q I RI + G K+ +VY +A T++E + R TK ++ ++ Sbjct: 952 DASWNPSHDVQSIFRI-----YRFGQKKPCYVYRFLAAGTMEEKIYNRQVTKLSLACRVV 1006 Query: 196 N 196 + Sbjct: 1007 D 1007 >gi|167628577|ref|YP_001679076.1| helicase (snf2 family) protein [Heliobacterium modesticaldum Ice1] gi|167591317|gb|ABZ83065.1| helicase (snf2 family) protein [Heliobacterium modesticaldum Ice1] Length = 537 Score = 79.6 bits (195), Expect = 3e-13, Method: Composition-based stats. Identities = 31/136 (22%), Positives = 61/136 (44%), Gaps = 21/136 (15%) Query: 65 KANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLN 124 +A P++V ++ L R +A Q ++ + +P+ S G G+N Sbjct: 370 QAAGIPVLV---YHGGLGRWTRAMTQ-----------HQFQKSDVPV-LISTESGGEGIN 414 Query: 125 LQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRL 184 LQ+ + ++ + L W+ +Q I R+ + G R V VY L + TI+E +L+ L Sbjct: 415 LQF-CSQVINYDLPWNPMRVEQRIGRV-----HRLGQSRDVHVYNLSTRGTIEEQMLRLL 468 Query: 185 RTKSTIQDLLLNALKK 200 K + + +++ Sbjct: 469 SEKIEMFAQTIGPIER 484 >gi|326433455|gb|EGD79025.1| helicase DNA-binding protein [Salpingoeca sp. ATCC 50818] Length = 1742 Score = 79.6 bits (195), Expect = 3e-13, Method: Composition-based stats. Identities = 26/158 (16%), Positives = 58/158 (36%), Gaps = 18/158 (11%) Query: 46 KHWKEVHDEKIKALEVIIEKANAAPII----VAYHFNSDLARLQKAFPQGRTLDKDPCTI 101 + V + + AL ++E ++ A+ RL + D I Sbjct: 1153 REKVLVFSQSLFAL-DLVESFLKRLVVPGTREAWQKKKHYFRLDGSTSASERAD----MI 1207 Query: 102 QEWNEG---KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQ 158 + +N+ + + G++L + +V W+ Q + R + Sbjct: 1208 EAFNDRSNLDMHAFLISTRAGSLGISLT-AASRVVILDTSWNPSHDAQAV-----CRVYR 1261 Query: 159 AGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 G + F+Y L+A T++E + R TK + + +++ Sbjct: 1262 YGQDKPCFIYRLVAAGTMEETIYNRQVTKVGLANRVVD 1299 >gi|171685718|ref|XP_001907800.1| hypothetical protein [Podospora anserina S mat+] gi|170942820|emb|CAP68473.1| unnamed protein product [Podospora anserina S mat+] Length = 1877 Score = 79.6 bits (195), Expect = 3e-13, Method: Composition-based stats. Identities = 28/158 (17%), Positives = 62/158 (39%), Gaps = 19/158 (12%) Query: 52 HDEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQKAFPQGRT----------LDKDPC 99 H KI AL ++ + ++ L L+ F + + ++ Sbjct: 1255 HSYKIVALMFLLGEFRKVGDKALIFTQSIPALDFLESIFKRRQIGYQRLDGHTPINTRQA 1314 Query: 100 TIQEWNEGK-IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQ 158 +I+++N + + G GLN+ YG N ++ + + QQ I R + Sbjct: 1315 SIKKFNSNDSADVYLISTKAGGVGLNI-YGANRVIILDFKYSPTDEQQAIGR-----AYR 1368 Query: 159 AGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 G + V+VY+L+ T + + + K+ + +++ Sbjct: 1369 LGQTKPVYVYWLMIGGTFEATIHKSAIFKTQLASRVID 1406 >gi|330804383|ref|XP_003290175.1| hypothetical protein DICPUDRAFT_98599 [Dictyostelium purpureum] gi|325079732|gb|EGC33319.1| hypothetical protein DICPUDRAFT_98599 [Dictyostelium purpureum] Length = 1134 Score = 79.2 bits (194), Expect = 3e-13, Method: Composition-based stats. Identities = 32/142 (22%), Positives = 51/142 (35%), Gaps = 19/142 (13%) Query: 67 NAAPIIVAYH-------FNS--DLARLQKAFPQGRT--LDKDPCTIQEWNEG-KIPLLFA 114 + +++ F S D +L+ G K I +N Sbjct: 677 DGHRLLMFSQSVKMLDDFESVLDFLKLKYLRIDGSISSTKKRQEIIDLYNTDHSYFAFIM 736 Query: 115 HPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQN 174 GLNL +L+ F W+ I+ V R + G KR V VY LI Sbjct: 737 TIQVGALGLNLTSADRVLI-FDPSWN------TIDNQAVDRAYRIGQKRDVVVYRLITCG 789 Query: 175 TIDELVLQRLRTKSTIQDLLLN 196 TI+E + ++ K ++ +LN Sbjct: 790 TIEEKIYRKQVFKGSLMKTMLN 811 >gi|297848822|ref|XP_002892292.1| hypothetical protein ARALYDRAFT_470549 [Arabidopsis lyrata subsp. lyrata] gi|297338134|gb|EFH68551.1| hypothetical protein ARALYDRAFT_470549 [Arabidopsis lyrata subsp. lyrata] Length = 1406 Score = 79.2 bits (194), Expect = 3e-13, Method: Composition-based stats. Identities = 31/162 (19%), Positives = 63/162 (38%), Gaps = 25/162 (15%) Query: 53 DEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAF-------PQGRTL--------D 95 K + L +E + ++V + L + K P L Sbjct: 1194 SVKTRFLMEFVELCEVIKEKVLVFSQYIDPLKLIMKHLVSRFKWNPGQEVLYMHGKLEQK 1253 Query: 96 KDPCTIQEWNEGK--IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGV 153 + I E+N+ K + A +C G++L G + ++ + W+ +ER + Sbjct: 1254 QRQTLINEFNDPKSKAKVFLASTKACSEGISL-VGASRVILLDVVWN-----PAVERQAI 1307 Query: 154 TRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 +R + G +R V+ Y+L+A+ T + + K I +L+ Sbjct: 1308 SRAYRIGQQRIVYTYHLVAKGTPEGPKYCKQAQKDRISELVF 1349 >gi|119181856|ref|XP_001242107.1| hypothetical protein CIMG_06003 [Coccidioides immitis RS] Length = 2054 Score = 79.2 bits (194), Expect = 3e-13, Method: Composition-based stats. Identities = 28/159 (17%), Positives = 63/159 (39%), Gaps = 20/159 (12%) Query: 52 HDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQKAFPQGR----------TLDKDPC 99 H + L+ II+++ +++ H L ++ R + Sbjct: 1370 HSHRAAMLDQIIKQSVNAGDKVLIFSHSIPTLNYIEDVLKVNRWRYCRLDGTTPITSRQS 1429 Query: 100 TIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 + +N+ P + + G GLN+ G N +V F ++ +Q + R Sbjct: 1430 ATKSFNKIDSPMQVYLISTKAGGLGLNI-PGANRVVIFDFAFNPTWEEQAVGR-----AY 1483 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + G ++ VFVY IA T ++++ + K+ + +++ Sbjct: 1484 RFGQRKPVFVYRFIAGGTYEDIMYNKTVFKTQLSFRVVD 1522 >gi|134085395|ref|NP_001076824.1| helicase ARIP4 [Xenopus (Silurana) tropicalis] gi|166217265|sp|A4IHD2|ARIP4_XENTR RecName: Full=Helicase ARIP4; AltName: Full=Androgen receptor-interacting protein 4; AltName: Full=RAD54-like protein 2 gi|134023855|gb|AAI35474.1| rad54l2 protein [Xenopus (Silurana) tropicalis] Length = 1396 Score = 79.2 bits (194), Expect = 3e-13, Method: Composition-based stats. Identities = 32/184 (17%), Positives = 70/184 (38%), Gaps = 39/184 (21%) Query: 52 HDEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQKAFPQGR----------------- 92 + K+ L +IE++ I+V S L+ +++ + + Sbjct: 714 NSPKMVLLFHLIEESMRMGDKILVFSQSLSTLSIMEEFLAKRKMPIPAGSDGQEGHTWIR 773 Query: 93 -----------TLDKDPCTIQEWNEG---KIPLLFAHPASCGHGLNLQYGGNILVFFSLW 138 + + I ++N+ K+ L + G+NL G N +V F Sbjct: 774 NVNYYRLDGSTSASERERLINQFNDPSNEKVWLFLLSTRAGCLGVNL-IGANRVVVFDAS 832 Query: 139 WDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNAL 198 W+ Q + R + G ++ ++Y L++ T+++ + R TK + D +++ L Sbjct: 833 WNPCHDAQAV-----CRVYRYGQRKPCYIYRLVSDFTLEKKIYDRQITKQGMSDRVVDDL 887 Query: 199 KKET 202 E Sbjct: 888 NPEV 891 >gi|70953048|ref|XP_745650.1| hypothetical protein [Plasmodium chabaudi chabaudi] gi|56526041|emb|CAH75841.1| conserved hypothetical protein [Plasmodium chabaudi chabaudi] Length = 1029 Score = 79.2 bits (194), Expect = 3e-13, Method: Composition-based stats. Identities = 22/101 (21%), Positives = 42/101 (41%), Gaps = 6/101 (5%) Query: 93 TLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIG 152 T+++ + + + + G GLNL N ++ W+ +R Sbjct: 888 TIERQQIIKEFSENDNVFIFLLSTKAGGVGLNL-IAANHVILMDQDWNPH-----NDRQA 941 Query: 153 VTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDL 193 R + G K+ V++Y L +NTI+E VL+ + K + Sbjct: 942 EDRVHRLGQKKEVYIYRLCCKNTIEETVLKCCKAKLHLDQA 982 >gi|67540104|ref|XP_663826.1| hypothetical protein AN6222.2 [Aspergillus nidulans FGSC A4] gi|40738446|gb|EAA57636.1| hypothetical protein AN6222.2 [Aspergillus nidulans FGSC A4] Length = 1933 Score = 79.2 bits (194), Expect = 3e-13, Method: Composition-based stats. Identities = 36/210 (17%), Positives = 69/210 (32%), Gaps = 31/210 (14%) Query: 21 EAFNSASKTVKCLQLANG----------AVYYDEEKHWKEVHDEKIKALEV---IIEKAN 67 A +A ++ A Y K + + E + E Sbjct: 1717 SAITAAGLQDYLMEQAREKQTRKQAKVLGEYEGPHTKTKALLSHLLATAEESAKLPEGEA 1776 Query: 68 AAPIIVAYHFNSDLARLQ-KAFPQGRT----------LDKDPCTIQEWNEGK-IPLLFAH 115 +V + S L ++ QG T L + + + +L A Sbjct: 1777 PIKSVVFSAWTSHLDLIEIALRDQGLTGYTRLDGTMSLPARNKALDNFRDDNNTTILLAT 1836 Query: 116 PASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNT 175 + G GLNL ++ + ++ Q I+R+ + G R V I +++ Sbjct: 1837 IGAGGVGLNLTAASHVYIM-EPQYNPAAVAQAIDRV-----HRLGQTREVTTVQFIMKDS 1890 Query: 176 IDELVLQRLRTKSTIQDLLLNALKKETIHV 205 I+E + + + K + D+ LN K + V Sbjct: 1891 IEEKIAELAKKKQQLADMSLNRGKLDKAEV 1920 >gi|304407151|ref|ZP_07388805.1| SNF2-related protein [Paenibacillus curdlanolyticus YK9] gi|304344138|gb|EFM09978.1| SNF2-related protein [Paenibacillus curdlanolyticus YK9] Length = 606 Score = 79.2 bits (194), Expect = 3e-13, Method: Composition-based stats. Identities = 31/154 (20%), Positives = 66/154 (42%), Gaps = 17/154 (11%) Query: 51 VHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAF--------PQGRTLDKDPCT-I 101 + K + +I + + +I+ + + L + F P +++ + Sbjct: 381 TANTKAEKAMELIREIDDK-VIIFTEYRATQEYLLQYFRSHGLQAVPYRGGMNRGKKDWM 439 Query: 102 QEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGF 161 + G+ +L A + G G+NLQ+ + ++ F L W+ +Q I R+ + G Sbjct: 440 MDLFRGRAQVLIA-TEAGGEGINLQF-CHHMINFDLPWNPMRVEQRIGRV-----HRLGQ 492 Query: 162 KRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 K V +Y L TI+E ++ L K + +L++ Sbjct: 493 KHDVRIYNLCTLGTIEEHIVNLLHEKINLFELVI 526 >gi|296412641|ref|XP_002836031.1| hypothetical protein [Tuber melanosporum Mel28] gi|295629831|emb|CAZ80188.1| unnamed protein product [Tuber melanosporum] Length = 876 Score = 79.2 bits (194), Expect = 3e-13, Method: Composition-based stats. Identities = 29/167 (17%), Positives = 67/167 (40%), Gaps = 24/167 (14%) Query: 51 VHDEKIKALEV-IIE----KANAAPI--IVAYHFNSDLARLQKAFPQGR----------T 93 K+KAL ++E ++PI +V + S + ++ AF T Sbjct: 697 GPSTKVKALISSLLENKKASTTSSPIKSVVFSCWTSHMDLIEIAFKDNGINFVRLDGSMT 756 Query: 94 LDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIG 152 + ++++ +I ++ + G GLNL V ++ Q I+RI Sbjct: 757 RTQRNRVMEDFERAPEISVILISIMAGGLGLNLTAACKAYVM-EPQFNPAAESQAIDRI- 814 Query: 153 VTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 + G R V I +++ + +++ + K+ + +L +++ + Sbjct: 815 ----HRLGQTRPVTTTRYIMRDSFEMKIVELQKKKTELANLSMSSGR 857 >gi|110289185|gb|ABB47753.2| SNF2 domain-containing protein, putative, expressed [Oryza sativa Japonica Group] Length = 1476 Score = 79.2 bits (194), Expect = 3e-13, Method: Composition-based stats. Identities = 30/181 (16%), Positives = 67/181 (37%), Gaps = 33/181 (18%) Query: 43 DEEKHWKEVHDEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQ-------------KA 87 DE + + + K+ L I+ + +V S L ++ K Sbjct: 1105 DENAYKEADYSGKMVLLLDILSSCSELGDKALVFSQSLSTLDLVEFYLSKLQVNGKEGKY 1164 Query: 88 FPQGRTLDK---------DPCTIQEWNEGK---IPLLFAHPASCGHGLNLQYGGNILVFF 135 + QG+ + ++ +N+ + + + G+NL + N ++ Sbjct: 1165 WKQGKDWYRIDGSTPSSERQNLVERFNDPENIRVKCTLISTRAGYIGINL-HSANRVILL 1223 Query: 136 SLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 W+ Q I R+ + G + V+ Y L+A T++E + +R TK + ++ Sbjct: 1224 DGSWNPTHDLQAIYRVW-----RYGQTKPVYAYRLMAHATMEEKIYKRQVTKEGLAARVV 1278 Query: 196 N 196 + Sbjct: 1279 D 1279 >gi|328856775|gb|EGG05895.1| hypothetical protein MELLADRAFT_87660 [Melampsora larici-populina 98AG31] Length = 1354 Score = 79.2 bits (194), Expect = 3e-13, Method: Composition-based stats. Identities = 22/135 (16%), Positives = 52/135 (38%), Gaps = 21/135 (15%) Query: 72 IVAYHFNSDLARLQKAFPQ-----GR--------TLDKDPCTIQEWNEGKIPLLFAHPAS 118 +V + L R+ A + GR +K ++ + K +L + Sbjct: 1174 VVFSQWTKMLDRIGDALDEFNIGYGRLDGTMSRPERNKAMEDLK--TDPKCEVLLVSLRA 1231 Query: 119 CGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDE 178 G GLNL + +W+ Q ++R+ + G + V + I ++++ Sbjct: 1232 GGVGLNLTC-AQRVYLMEPFWNPAVENQAVDRV-----HRLGQTKPVRMIRYIIAGSVEQ 1285 Query: 179 LVLQRLRTKSTIQDL 193 +L+ + K+ + ++ Sbjct: 1286 NMLEIQKRKTELANM 1300 >gi|317158963|ref|XP_001827440.2| DNA repair helicase rad5,16 [Aspergillus oryzae RIB40] Length = 1113 Score = 79.2 bits (194), Expect = 3e-13, Method: Composition-based stats. Identities = 29/155 (18%), Positives = 64/155 (41%), Gaps = 21/155 (13%) Query: 50 EVHDEKIKALEVI----IEKANAAPIIVAYHFNSDLARL-----QKAFPQGRT-----LD 95 E+ K+ ++ I I++ I++ F L + ++ + L Sbjct: 923 EMTSAKLVKIQEIVKGWIDENPDVKIVIFTQFLDFLRLVGLMCNKEKWVATSLHGKLSLQ 982 Query: 96 KDPCTIQEW-NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 ++ ++ +E ++ +L A + G GL++ N + LWW+ QQ R+ Sbjct: 983 AREQSMDKFRDEKEVRILIASLKAGGIGLDMSM-ANKCILVDLWWNEAIQQQAFCRL--- 1038 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKST 189 + G + V +I +++IDE +L+ K+ Sbjct: 1039 --YRIGQSKDVEFVKIIIKDSIDEYLLKMQTRKTA 1071 >gi|169830699|ref|YP_001716681.1| helicase domain-containing protein [Candidatus Desulforudis audaxviator MP104C] gi|169637543|gb|ACA59049.1| helicase domain protein [Candidatus Desulforudis audaxviator MP104C] Length = 1147 Score = 79.2 bits (194), Expect = 3e-13, Method: Composition-based stats. Identities = 39/166 (23%), Positives = 66/166 (39%), Gaps = 29/166 (17%) Query: 51 VHDEKIKALEVIIEKAN-----AAPIIVAYHFNSDLARLQKAFPQGRTL----------- 94 + K+ L+ ++ K A +++ F L L Sbjct: 476 DSEAKLSKLKDLLHKEGFFDQPAKRLLLFTEFKDTLTYLVGNLKTWGLKVGYIHGGMKPG 535 Query: 95 -----DKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIE 149 Q++ EG+I +L A + G G+NLQ NIL + + W+ +Q + Sbjct: 536 SRDEPGTRLYAEQQFREGEIQVLVA-TEAAGEGINLQV-CNILFNYDIPWNPNRLEQRMG 593 Query: 150 RIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTK-STIQDLL 194 RI + G ++ ++ +A NTI+ VLQRL K I+D L Sbjct: 594 RI-----HRYGQRKDCLIFNFVATNTIEGRVLQRLLEKLQEIRDAL 634 >gi|194221261|ref|XP_001495142.2| PREDICTED: RAD54-like 2 (S. cerevisiae) [Equus caballus] Length = 1466 Score = 79.2 bits (194), Expect = 3e-13, Method: Composition-based stats. Identities = 35/180 (19%), Positives = 67/180 (37%), Gaps = 39/180 (21%) Query: 52 HDEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQKAFPQGRTL---DKDPCTIQEW-- 104 + K+ L +IE++ I+V S LA +++ + + +Q+W Sbjct: 718 NSPKMVLLFHLIEESVKLGDKILVFSQSLSTLALIEEFLGKREVPCLPGAEGQGVQKWVR 777 Query: 105 N------EGKIP--------------------LLFAHPASCGHGLNLQYGGNILVFFSLW 138 N +G P L + G+NL G N +V F Sbjct: 778 NVSYFRLDGSTPAFERERLINQFNDPSNLTTWLFLLSTRAGCLGVNL-IGANRVVVFDAS 836 Query: 139 WDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNAL 198 W+ Q + R + G K+ +Y L+A T+++ + R +K + D +++ L Sbjct: 837 WNPCHDAQAV-----CRVYRYGQKKPCHIYRLVADFTLEKKIYDRQISKQGMSDRVVDDL 891 >gi|300933243|ref|ZP_07148499.1| hypothetical protein CresD4_04190 [Corynebacterium resistens DSM 45100] Length = 836 Score = 79.2 bits (194), Expect = 3e-13, Method: Composition-based stats. Identities = 32/196 (16%), Positives = 74/196 (37%), Gaps = 25/196 (12%) Query: 7 FQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEK- 65 + E + + + E+IE + +A + + D + + K++ + +++ Sbjct: 615 MEVEEWIEPKPEDIETYENAVQRGHFM---------DMRQAFSGPRSAKMERITELLDDG 665 Query: 66 ANAAPIIVAYHFNSDLARLQKAFPQ--------GRTLDKDPCTIQEWNEGKI-PLLFAHP 116 A+ A I+ +F S L L G + + + ++ +L Sbjct: 666 ADGAKTIIFTYFRSVLDGLVAHLGDRAFGPIAGGVSHQERQKAVDDFTAASPGAVLVCQI 725 Query: 117 ASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTI 176 + GLN+Q + +V F + Q + R + G R V V+ L+ +++ Sbjct: 726 TAASEGLNIQ-AASRVVIFEPQLNPAVEAQAVAR-----AHRMGQIRTVEVHRLLTPDSV 779 Query: 177 DELVLQRLRTKSTIQD 192 +E + L K + + Sbjct: 780 EEQLTAMLADKRALFE 795 >gi|289679709|ref|ZP_06500599.1| SNF2-related:helicase, C-terminal:SWIM Zn-finger [Pseudomonas syringae pv. syringae FF5] Length = 339 Score = 79.2 bits (194), Expect = 3e-13, Method: Composition-based stats. Identities = 26/110 (23%), Positives = 46/110 (41%), Gaps = 14/110 (12%) Query: 29 TVKCLQLANGA--VYYDEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARL 84 +K Q+ V D + K+ K+ +L + E+ A I++ F S L+ + Sbjct: 231 LLKLRQVCCDLRLVNQDMPVNSKQGTSGKLNSLMEMFEELLAEGRKILLFSQFTSMLSLI 290 Query: 85 QKAFPQ---------GRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNL 125 ++ Q G T D+ I ++ GK+P+ + G GLNL Sbjct: 291 EEELKQRGIAYALLTGSTRDRR-TPIHDFQSGKLPIFLISLKAGGTGLNL 339 >gi|291393761|ref|XP_002713270.1| PREDICTED: RAD54-like 2 [Oryctolagus cuniculus] Length = 1467 Score = 79.2 bits (194), Expect = 3e-13, Method: Composition-based stats. Identities = 34/180 (18%), Positives = 66/180 (36%), Gaps = 39/180 (21%) Query: 52 HDEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQKAFPQGRT---------------- 93 + K+ L +IE++ I+V S LA +++ + Sbjct: 719 NSPKMVLLFHLIEESVKLGDKILVFSQSLSTLALIEEFLGKREVPCLPGAEGQGAQKWVR 778 Query: 94 ------LD------KDPCTIQEWNEGKIP---LLFAHPASCGHGLNLQYGGNILVFFSLW 138 LD + I ++N+ L + G+NL G N +V F Sbjct: 779 NVSYFRLDGSTPAFERERLINQFNDPSNLTTWLFLLSTRAGCLGVNL-IGANRVVVFDAS 837 Query: 139 WDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNAL 198 W+ Q + R + G K+ +Y L+A T+++ + R +K + D +++ L Sbjct: 838 WNPCHDAQAV-----CRVYRYGQKKPCHIYRLVADYTLEKKIYDRQISKQGMSDRVVDDL 892 >gi|319655732|ref|NP_956947.2| transcriptional regulator ATRX [Danio rerio] Length = 2013 Score = 79.2 bits (194), Expect = 3e-13, Method: Composition-based stats. Identities = 37/197 (18%), Positives = 70/197 (35%), Gaps = 19/197 (9%) Query: 9 RELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANA 68 +E + E + + L+LA D++ + +E +E A Sbjct: 1548 KEFVSEEDAEVLTHSGKMVLLFEILRLAEE---VDDKVLVFSQSLISLDLIEDFLELAGR 1604 Query: 69 APII---VAY-----HFNS-DLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASC 119 A Y F + D RL + T K + + + L + Sbjct: 1605 AKEEGKESPYKGEGKWFRNIDYYRLDGST-NALTRKKWAEDFNDISNVRGRLFLISTRAG 1663 Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 G+NL N ++ F W+ Q I R+ + G + V+VY +AQ T++E Sbjct: 1664 SLGINL-VAANRVIIFDASWNPSYDIQSIFRV-----YRFGQVKTVYVYRFLAQGTMEEK 1717 Query: 180 VLQRLRTKSTIQDLLLN 196 + R K ++ +++ Sbjct: 1718 IYDRQVAKQSLSFRVVD 1734 >gi|301604464|ref|XP_002931858.1| PREDICTED: transcriptional regulator ATRX [Xenopus (Silurana) tropicalis] Length = 2268 Score = 79.2 bits (194), Expect = 3e-13, Method: Composition-based stats. Identities = 33/154 (21%), Positives = 59/154 (38%), Gaps = 20/154 (12%) Query: 56 IKALEVIIE-------KANAAPIIVAY-----HFNS-DLARLQKAFPQGRTLDKDPCTIQ 102 + +E +E + NA+ V Y F + D RL +T K Sbjct: 1819 LDLIEDFLELASTEKNEENASEKPVFYKGDGKWFRNIDYYRLDGQTS-PQTRKKWAEEFN 1877 Query: 103 EWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFK 162 + + L + G+NL N ++ F W+ Q I R+ + G Sbjct: 1878 DSTNIRGRLFLISTKAGSLGINL-VAANRVIIFDASWNPSYDIQSIFRV-----YRFGQI 1931 Query: 163 RAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + VFVY +AQ T++E + R K ++ +++ Sbjct: 1932 KPVFVYRFLAQGTMEEKIYDRQIAKQSLSFRVID 1965 >gi|196003014|ref|XP_002111374.1| hypothetical protein TRIADDRAFT_55311 [Trichoplax adhaerens] gi|190585273|gb|EDV25341.1| hypothetical protein TRIADDRAFT_55311 [Trichoplax adhaerens] Length = 954 Score = 79.2 bits (194), Expect = 3e-13, Method: Composition-based stats. Identities = 27/176 (15%), Positives = 61/176 (34%), Gaps = 37/176 (21%) Query: 52 HDEKIKALEVIIEKA--NAAPIIVAYH-------FNSDLARLQ----------KAFPQGR 92 H K+ L +IE + +++ L++++ K + + Sbjct: 697 HGGKMVILMDLIENSVKLGDRMLIFSQSLVTLSIIEHFLSKIEIPCTSSEGNNKKWAKNE 756 Query: 93 TLDK---------DPCTIQEWNEGKIP---LLFAHPASCGHGLNLQYGGNILVFFSLWWD 140 + + I +N L + G+NL N +V + W+ Sbjct: 757 SYFRIDGSVPSHERSRLIDLFNSPDNNSVWLFLISTRAGNLGINL-VAANRVVIYDSAWN 815 Query: 141 LEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 Q RI + G K+ ++Y L+ NT++ ++ +R K + +++ Sbjct: 816 PCYDNQAAFRI-----YRYGQKKPCYIYRLVGSNTMEHVIYKRQIRKQGLSRRIID 866 >gi|328721366|ref|XP_001942895.2| PREDICTED: transcriptional regulator ATRX homolog [Acyrthosiphon pisum] Length = 1045 Score = 79.2 bits (194), Expect = 3e-13, Method: Composition-based stats. Identities = 28/170 (16%), Positives = 62/170 (36%), Gaps = 40/170 (23%) Query: 56 IKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTI-------------- 101 ++ E I +++ L +Q +D D Sbjct: 741 LQECEDI-----GDKVLLFSQSLLTLDLIQDFLENAEDIDDDGGPYGKSWTHGVDFYRID 795 Query: 102 ------------QEWN---EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 + +N K+ LL + G+NL G N ++ F + W+ + Q Sbjct: 796 GSANSRTREDFCERFNDITNTKMRLLLLSTKAFNLGINL-IGANRVIIFDVTWNPSLNVQ 854 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 I R+ + G K+ ++Y LI++ T+++ + +R +K + +++ Sbjct: 855 SIFRVF-----RFGQKKPCYIYRLISEGTMEQKIYERQISKLSTAFRVVD 899 >gi|115482344|ref|NP_001064765.1| Os10g0457700 [Oryza sativa Japonica Group] gi|113639374|dbj|BAF26679.1| Os10g0457700 [Oryza sativa Japonica Group] Length = 1319 Score = 79.2 bits (194), Expect = 3e-13, Method: Composition-based stats. Identities = 30/181 (16%), Positives = 67/181 (37%), Gaps = 33/181 (18%) Query: 43 DEEKHWKEVHDEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQ-------------KA 87 DE + + + K+ L I+ + +V S L ++ K Sbjct: 1105 DENAYKEADYSGKMVLLLDILSSCSELGDKALVFSQSLSTLDLVEFYLSKLQVNGKEGKY 1164 Query: 88 FPQGRTLDK---------DPCTIQEWNEGK---IPLLFAHPASCGHGLNLQYGGNILVFF 135 + QG+ + ++ +N+ + + + G+NL + N ++ Sbjct: 1165 WKQGKDWYRIDGSTPSSERQNLVERFNDPENIRVKCTLISTRAGYIGINL-HSANRVILL 1223 Query: 136 SLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 W+ Q I R+ + G + V+ Y L+A T++E + +R TK + ++ Sbjct: 1224 DGSWNPTHDLQAIYRVW-----RYGQTKPVYAYRLMAHATMEEKIYKRQVTKEGLAARVV 1278 Query: 196 N 196 + Sbjct: 1279 D 1279 >gi|310792112|gb|EFQ27639.1| SNF2 family domain-containing protein [Glomerella graminicola M1.001] Length = 1103 Score = 79.2 bits (194), Expect = 3e-13, Method: Composition-based stats. Identities = 30/167 (17%), Positives = 61/167 (36%), Gaps = 27/167 (16%) Query: 51 VHDEKIKAL-EVIIEKANAA---------PIIVAYHFNSDLARLQKAFPQGR-------- 92 K +AL E +++ + +V + S L +Q A Sbjct: 919 GPHTKTRALIEDLLKSKADSEASPHEPPYKSVVFSTWTSHLDLIQMALDNVGIKYVRLDG 978 Query: 93 --TLDKDPCTIQEWNEGK-IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIE 149 T + + + + ++ + G GLNL G ++ V ++ Q I+ Sbjct: 979 SMTRVARTQAMDSFRDDNSVHVILVSITAGGLGLNLTAGSSVYVM-EPQYNPAAEAQAID 1037 Query: 150 RIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 R+ + G KR V I +N+ +E +L+ K+ + L ++ Sbjct: 1038 RV-----HRLGQKRPVRTVRYIMRNSFEEKMLELQEKKNKLASLSMD 1079 >gi|238909201|ref|YP_002939668.1| non-specific serine/threonine protein kinase [Eubacterium eligens ATCC 27750] gi|238873438|gb|ACR73147.1| non-specific serine/threonine protein kinase [Eubacterium eligens ATCC 27750] Length = 559 Score = 79.2 bits (194), Expect = 3e-13, Method: Composition-based stats. Identities = 34/208 (16%), Positives = 78/208 (37%), Gaps = 26/208 (12%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEV 61 KQY + + D++ + + N + T++ QL +G ++ K+ ++ Sbjct: 349 KQYRDIKNGIVADME-NILASVNPLNCTLRLRQLTSGNPNLTDD-------SPKLDRIKE 400 Query: 62 IIEKA---NAAPIIVAYHFNSDLARLQKAFPQGRTL--------DKDPCTIQEWN-EGKI 109 ++E+ N I+ +++ L + + ++ + + Sbjct: 401 MLEEEIIPNGHKAIIFSQWSTIAKDLGIELSEYDPIVITGEVPPEQRQRLVDNFQTNPHC 460 Query: 110 PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYY 169 + + G GL L + + F W+ ++ Q +R + G AV V Sbjct: 461 KVAIGTIGAMGTGLTL-NKASYVFFMDKAWNSGDNAQAEDR-----AHRIGTVGAVNVIS 514 Query: 170 LIAQNTIDELVLQRLRTKSTIQDLLLNA 197 ++A+ TIDE V L + D +++ Sbjct: 515 MVAKGTIDEAVEDYLLENKDLIDRVVDG 542 >gi|324526853|gb|ADY48722.1| Transcription activator BRG1 [Ascaris suum] Length = 245 Score = 79.2 bits (194), Expect = 3e-13, Method: Composition-based stats. Identities = 23/94 (24%), Positives = 41/94 (43%), Gaps = 6/94 (6%) Query: 106 EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 + + + + G GLNLQ + ++ F W+ + Q R + G R V Sbjct: 20 DSEYFIFILSTRAGGLGLNLQT-ADTVIIFDSDWNPHQDMQA-----QDRAHRIGQSREV 73 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 V L+ N+I+E +L R K + + ++ A K Sbjct: 74 RVLRLVTVNSIEEKILAAARYKLNVDEKVIQAGK 107 >gi|258572168|ref|XP_002544846.1| predicted protein [Uncinocarpus reesii 1704] gi|237905116|gb|EEP79517.1| predicted protein [Uncinocarpus reesii 1704] Length = 1932 Score = 79.2 bits (194), Expect = 3e-13, Method: Composition-based stats. Identities = 27/158 (17%), Positives = 59/158 (37%), Gaps = 20/158 (12%) Query: 53 DEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQKAFPQ----------GRTLDKDPCT 100 + LE I++++ ++V H L L+ Q + Sbjct: 1381 SHRATMLEQIVKESVSAGDKVLVFSHSIPTLNYLEHILKQNGWTYCRLDGTTPISSRQVA 1440 Query: 101 IQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQ 158 + +N P + + G GLN+ G N ++ F ++ +Q + R + Sbjct: 1441 TKYFNRTDSPMQVYLISTKAGGLGLNI-PGANRVIIFDFAFNPTWEEQAVGR-----AYR 1494 Query: 159 AGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 G + VFVY ++ T ++ + R K+ + +++ Sbjct: 1495 FGQTKPVFVYRFVSGGTYEDAMYNRTVFKTQLSFRVID 1532 >gi|241554086|ref|YP_002979299.1| helicase domain protein [Rhizobium leguminosarum bv. trifolii WSM1325] gi|240863392|gb|ACS61054.1| helicase domain protein [Rhizobium leguminosarum bv. trifolii WSM1325] Length = 493 Score = 79.2 bits (194), Expect = 3e-13, Method: Composition-based stats. Identities = 40/200 (20%), Positives = 80/200 (40%), Gaps = 24/200 (12%) Query: 3 QYHKFQRELYCDLQGEN----IEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKA 58 Y +F+ EL + + +A + + ++ +Q+A+ D+ K++A Sbjct: 263 IYAQFRDELAAIVVRQGRPVLDDAEDILKRLLRLVQVASNPAMVDQAYRSVPG---KMRA 319 Query: 59 LEVIIEKA--NAAPIIVAYHFNSDLARLQKAFPQ--------GRTLDKDPCTIQEWN-EG 107 L+ ++ A I+V +F + L + + G + K + + + Sbjct: 320 LDELVTSAIDAREKIVVWTNFTMNAEALCRHLGEFGAVLVHGGIEIAKREEALTAFKTDP 379 Query: 108 KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFV 167 + +L A P + GL L N VF+ + L+++ Q +RI + + FV Sbjct: 380 QTRVLVATPGAAKEGLTLTV-ANHAVFYDRSFSLDDYLQAQDRI-----HRISQDKPCFV 433 Query: 168 YYLIAQNTIDELVLQRLRTK 187 LI +T+D V L K Sbjct: 434 TNLIGMDTVDAWVDALLSAK 453 >gi|157113183|ref|XP_001651931.1| helicase [Aedes aegypti] gi|108877866|gb|EAT42091.1| helicase [Aedes aegypti] Length = 740 Score = 79.2 bits (194), Expect = 3e-13, Method: Composition-based stats. Identities = 41/207 (19%), Positives = 84/207 (40%), Gaps = 21/207 (10%) Query: 8 QRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKAN 67 + ++ D+ G + + +K + L + V+ + ++ L+ I + Sbjct: 529 EAQVELDISGNTSQDTAAITKASSKVMLRSNPVF--DLTRMSSKIARLLELLDEKILCGD 586 Query: 68 AAPIIVAYHFNSDLA---------RLQKAFPQGRTLDKDPCTI-QEWNE-GKIP-LLFAH 115 +IV ++S L R++ G+ K I E+N+ G P ++ Sbjct: 587 DKAVIV-SQWSSVLDIVAHHLSSKRVKYVSLTGKVAVKFRNDIVTEFNKQGSGPKVMLLS 645 Query: 116 PASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNT 175 + G GLNL G N L+ L W+ + Q +R+ + G K+ VFV+ + T Sbjct: 646 LTAGGVGLNL-VGANHLLLLDLHWNPQLEAQAQDRV-----YRVGQKKTVFVWKFMCVET 699 Query: 176 IDELVLQRLRTKSTIQDLLLNALKKET 202 +++ + K I + +L K++ Sbjct: 700 VEQAIRGLQEKKIGIANEVLTGTKQKG 726 >gi|71027005|ref|XP_763146.1| global transcription activator [Theileria parva strain Muguga] gi|68350099|gb|EAN30863.1| global transcription activator (SNF2L2), putative [Theileria parva] Length = 998 Score = 79.2 bits (194), Expect = 3e-13, Method: Composition-based stats. Identities = 29/174 (16%), Positives = 63/174 (36%), Gaps = 25/174 (14%) Query: 28 KTVKCLQLANG-AVYYDEE----KHWKEVHDEKIKALEVIIEKAN--AAPIIVAYHFNSD 80 K ++ ++ N +Y + K+ L++I+ + +++ S Sbjct: 655 KFLQLRKICNHPFLYINSNFIPCNDLIINSSGKMCILDMILSRLYYVNHRVLIFSQMTSL 714 Query: 81 LARLQ-----KAFPQGRT-----LDKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYG 128 L L+ + + R +K I +NE + + G+NLQ Sbjct: 715 LDILEVYLNYRGYKYLRLDGNLSSEKRLERINLFNEPDSQYFVFILSTKAGSLGINLQ-S 773 Query: 129 GNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQ 182 + ++ + W+ + Q R+ + G K V LI NTI++ + + Sbjct: 774 ADTVIIYDSDWNPQNDLQAQSRV-----HRIGQKNQVITLRLITPNTIEDNIYR 822 >gi|90078875|dbj|BAE89117.1| unnamed protein product [Macaca fascicularis] Length = 500 Score = 79.2 bits (194), Expect = 3e-13, Method: Composition-based stats. Identities = 18/84 (21%), Positives = 41/84 (48%), Gaps = 6/84 (7%) Query: 113 FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIA 172 + G G+NL ++++ + W+ + Q ++R + G K+ V V+ LI Sbjct: 1 MLSTRAGGLGINL-ASADVVILYDSDWNPQVDLQAMDR-----AHRIGQKKPVRVFRLIT 54 Query: 173 QNTIDELVLQRLRTKSTIQDLLLN 196 NT++E +++R K + +++ Sbjct: 55 DNTVEERIVERAEIKLRLDSIVIQ 78 >gi|242023584|ref|XP_002432212.1| steroid receptor-interacting snf2 domain protein, putative [Pediculus humanus corporis] gi|212517609|gb|EEB19474.1| steroid receptor-interacting snf2 domain protein, putative [Pediculus humanus corporis] Length = 2665 Score = 79.2 bits (194), Expect = 3e-13, Method: Composition-based stats. Identities = 22/108 (20%), Positives = 45/108 (41%), Gaps = 7/108 (6%) Query: 96 KDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 + I E+N I + + G+NL G N ++ F W+ Q + Sbjct: 1771 EREKLINEFNANPNIHMFLVSTRAGSLGINL-VGANRVIVFDASWNPCHDTQAV-----C 1824 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKET 202 R + G ++ FVY L+ + +++ + R K + D +++ L + Sbjct: 1825 RVYRYGQRKQCFVYRLVMDSCLEKKIYDRQVNKQGMADRVVDELNPDA 1872 >gi|212534796|ref|XP_002147554.1| chromatin remodeling complex subunit (Chd3), putative [Penicillium marneffei ATCC 18224] gi|210069953|gb|EEA24043.1| chromatin remodeling complex subunit (Chd3), putative [Penicillium marneffei ATCC 18224] Length = 1605 Score = 79.2 bits (194), Expect = 3e-13, Method: Composition-based stats. Identities = 21/146 (14%), Positives = 53/146 (36%), Gaps = 18/146 (12%) Query: 68 AAPIIVAYHFNSDLARLQKAFPQGRTL----------DKDPCTIQEWNEG--KIPLLFAH 115 +++ F +L ++ L + I +N K Sbjct: 1071 GHRVLLFSQFLDNLDIVEDFLDGLGLLYCRLDGSMGAHEKQKQIDAYNAPDSKYFAFLLS 1130 Query: 116 PASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNT 175 S G G+NL + ++ ++ + Q + R + G ++ V V+ L+ + + Sbjct: 1131 TRSGGVGINL-ATADTVIIMDPDFNPHQDIQALSR-----AHRIGQQKKVLVFQLMTRES 1184 Query: 176 IDELVLQRLRTKSTIQDLLLNALKKE 201 +E ++Q + K + +L+ + + Sbjct: 1185 AEEKIMQIGKKKMALDHVLIEKMDAD 1210 >gi|121712770|ref|XP_001273996.1| SNF2 family helicase/ATPase, putative [Aspergillus clavatus NRRL 1] gi|119402149|gb|EAW12570.1| SNF2 family helicase/ATPase, putative [Aspergillus clavatus NRRL 1] Length = 1818 Score = 79.2 bits (194), Expect = 3e-13, Method: Composition-based stats. Identities = 26/157 (16%), Positives = 64/157 (40%), Gaps = 19/157 (12%) Query: 53 DEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQKAFP---------QGRT-LDKDPCT 100 + + L+ I+ ++ +++ H L ++ G+T + + Sbjct: 1396 SYRAQLLDRIVTESINAGDKVLIFSHRIPTLNYIEHILKAANRSYCRLDGKTPIFSRQAS 1455 Query: 101 IQEWNEG-KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQA 159 + +N G + + + G GLN+ G N +V F + +Q + R + Sbjct: 1456 TKRFNTGSEEQVYLISTRAGGLGLNI-PGANRVVIFDFSFSPVWEEQAVGR-----AYRL 1509 Query: 160 GFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 G ++ V+VY I+ T +E++ + K+ + +++ Sbjct: 1510 GQQKPVYVYRFISGGTFEEIMYNKAVFKTQLAFRVVD 1546 >gi|260946986|ref|XP_002617790.1| hypothetical protein CLUG_01249 [Clavispora lusitaniae ATCC 42720] gi|238847662|gb|EEQ37126.1| hypothetical protein CLUG_01249 [Clavispora lusitaniae ATCC 42720] Length = 568 Score = 79.2 bits (194), Expect = 3e-13, Method: Composition-based stats. Identities = 20/92 (21%), Positives = 43/92 (46%), Gaps = 6/92 (6%) Query: 111 LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYL 170 + + G G+NL +I++ + W+ + Q ++R + G K+ V V+ Sbjct: 31 IFLLTTRAGGLGINLTT-ADIVILYDSDWNPQADLQAMDR-----AHRIGQKKQVQVFRF 84 Query: 171 IAQNTIDELVLQRLRTKSTIQDLLLNALKKET 202 + +N I+E V+ R K + L++ ++ T Sbjct: 85 VTENAIEEKVMDRAAQKLRLDQLVIQQGRQAT 116 >gi|158120894|gb|ABW16947.1| helicase DNA-binding protein [Caenorhabditis remanei] Length = 167 Score = 79.2 bits (194), Expect = 3e-13, Method: Composition-based stats. Identities = 23/143 (16%), Positives = 46/143 (32%), Gaps = 18/143 (12%) Query: 67 NAAPIIVAYHFNSDLARLQK----------AFPQGRTLDKDPCTIQEW--NEGKIPLLFA 114 + +++ L L++ D I + + Sbjct: 30 DGHKVLIFSQMVKVLDLLEEFLITMSYPFERIDGNVRGDLRQAAIDRFSKENSDRFVFLL 89 Query: 115 HPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQN 174 + G G+NL + ++ F W+ + Q R + G K+ V VY LI N Sbjct: 90 CTRAGGLGINLT-AADTVIIFDSDWNPQNDLQAQARC-----HRIGQKKLVKVYRLITSN 143 Query: 175 TIDELVLQRLRTKSTIQDLLLNA 197 T + + + K + +L + Sbjct: 144 TYEREMFDKASLKLGLDKAVLQS 166 >gi|326924514|ref|XP_003208472.1| PREDICTED: LOW QUALITY PROTEIN: transcriptional regulator ATRX-like [Meleagris gallopavo] Length = 2479 Score = 79.2 bits (194), Expect = 3e-13, Method: Composition-based stats. Identities = 38/201 (18%), Positives = 73/201 (36%), Gaps = 26/201 (12%) Query: 9 RELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKI---KALEVIIEK 65 ++ D E +E + L++A +E V + + +E +E Sbjct: 1991 KDFVTDADAEVLEHSGKMVLLFEILRMA------EELGDKVLVFSQSLISLDLIEDFLEL 2044 Query: 66 ANAAPI----IVAY-----HFNS-DLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAH 115 AN Y F + D RL + ++ K + + L Sbjct: 2045 ANREKTDKEKPPIYKGEGKWFRNIDYYRLDGST-TAQSRKKWAEEFNDETNVRGRLFIIS 2103 Query: 116 PASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNT 175 + G+NL N ++ F W+ Q I R+ + G + VFVY +AQ T Sbjct: 2104 TKAGSLGINL-VAANRVIIFDASWNPSYDIQSIFRV-----YRFGQSKPVFVYRFLAQGT 2157 Query: 176 IDELVLQRLRTKSTIQDLLLN 196 +++ + R TK ++ +++ Sbjct: 2158 MEDKIYDRQVTKQSLSFRVVD 2178 >gi|242791161|ref|XP_002481703.1| chromatin remodeling complex subunit (Chd3), putative [Talaromyces stipitatus ATCC 10500] gi|218718291|gb|EED17711.1| chromatin remodeling complex subunit (Chd3), putative [Talaromyces stipitatus ATCC 10500] Length = 1597 Score = 79.2 bits (194), Expect = 3e-13, Method: Composition-based stats. Identities = 19/143 (13%), Positives = 50/143 (34%), Gaps = 18/143 (12%) Query: 68 AAPIIVAYHFNSDLARLQKAFPQGRTL----------DKDPCTIQEWNEGK--IPLLFAH 115 +++ F +L ++ + I +N Sbjct: 1069 GHRVLLFSQFLDNLDIVEDFLDGLGLFYCRLDGSMGAHEKQKKIDAFNAPDSTYFAFLLS 1128 Query: 116 PASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNT 175 S G G+NL + ++ ++ + Q + R + G ++ V V+ L+ + + Sbjct: 1129 TRSGGVGINL-ATADTVIIMDPDFNPHQDIQALSR-----AHRIGQQKKVLVFQLMTRES 1182 Query: 176 IDELVLQRLRTKSTIQDLLLNAL 198 +E ++Q + K + +L+ + Sbjct: 1183 AEEKIMQIGKKKMALDHVLIEKM 1205 >gi|324500492|gb|ADY40232.1| Transcriptional regulator ATRX [Ascaris suum] Length = 1681 Score = 78.8 bits (193), Expect = 4e-13, Method: Composition-based stats. Identities = 38/211 (18%), Positives = 75/211 (35%), Gaps = 36/211 (17%) Query: 9 RELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANA 68 R Y + N S + K + L +E V + I++L +I Sbjct: 1243 RGWYAETGLVTEADENDFSLSNKLMLLVQIVKKCEEIGDKILVFSQSIESLTLI------ 1296 Query: 69 APIIVAYHFNSDL------ARLQKA-----FPQGRTL---------DKDPCTIQEWNEGK 108 ++ Y + DL ++ A + +GR K ++N Sbjct: 1297 -KRMLHYMDSHDLWFSDGHEAIKSANETWGWIEGRDYMVIDGQVQSGKRQEVQTKFNNPN 1355 Query: 109 I---PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 L+ + G N+ N ++ F W+ Q + R+ + G + V Sbjct: 1356 NLRARLMLISTRAGSLGTNM-VAANRVIIFDACWNPSHDTQSLFRV-----YRFGQTKPV 1409 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 ++Y IAQ T++E + +R TK + +++ Sbjct: 1410 YIYRFIAQGTMEERIYKRQVTKESTALRVID 1440 >gi|147776792|emb|CAN74674.1| hypothetical protein VITISV_020205 [Vitis vinifera] Length = 278 Score = 78.8 bits (193), Expect = 4e-13, Method: Composition-based stats. Identities = 30/149 (20%), Positives = 53/149 (35%), Gaps = 17/149 (11%) Query: 44 EEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQ----------KAFPQGRT 93 E ++W E LE+ + + I+ + + L LQ Sbjct: 126 ENRNWVESSKVAALLLELENLCSVGSKSILFSQWTAFLDLLQIPLSRSNISFVRLDGTLN 185 Query: 94 LDKDPCTIQEW-NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIG 152 + I+++ E I +L + G G+NL + V WW+ +Q + RI Sbjct: 186 QQQREKVIKQFSEESHILVLLMSLKAGGVGINLMAASHAFVL-DPWWNPAVEEQAVMRI- 243 Query: 153 VTRQRQAGFKRAVFVYYLIAQNTIDELVL 181 + G + V + IA+ TI L Sbjct: 244 ----HRIGQTKRVMIKRFIAKGTIQRSAL 268 >gi|320034532|gb|EFW16476.1| conserved hypothetical protein [Coccidioides posadasii str. Silveira] Length = 2050 Score = 78.8 bits (193), Expect = 4e-13, Method: Composition-based stats. Identities = 28/159 (17%), Positives = 63/159 (39%), Gaps = 20/159 (12%) Query: 52 HDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQKAFPQGR----------TLDKDPC 99 H + L+ II+++ +++ H L ++ R + Sbjct: 1366 HSHRAAMLDQIIKQSINAGDKVLIFSHSIPTLNYIEDVLKVNRWRYCRLDGTTPITNRQS 1425 Query: 100 TIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 + +N+ P + + G GLN+ G N +V F ++ +Q + R Sbjct: 1426 ATKSFNKIDSPMQVYLISTKAGGLGLNI-PGANRVVIFDFAFNPTWEEQAVGR-----AY 1479 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + G ++ VFVY IA T ++++ + K+ + +++ Sbjct: 1480 RFGQRKPVFVYRFIAGGTYEDIMYNKTVFKTQLSFRVVD 1518 >gi|303318787|ref|XP_003069393.1| SNF2 family N-terminal domain containing protein [Coccidioides posadasii C735 delta SOWgp] gi|240109079|gb|EER27248.1| SNF2 family N-terminal domain containing protein [Coccidioides posadasii C735 delta SOWgp] Length = 2054 Score = 78.8 bits (193), Expect = 4e-13, Method: Composition-based stats. Identities = 28/159 (17%), Positives = 63/159 (39%), Gaps = 20/159 (12%) Query: 52 HDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQKAFPQGR----------TLDKDPC 99 H + L+ II+++ +++ H L ++ R + Sbjct: 1370 HSHRAAMLDQIIKQSINAGDKVLIFSHSIPTLNYIEDVLKVNRWRYCRLDGTTPITNRQS 1429 Query: 100 TIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 + +N+ P + + G GLN+ G N +V F ++ +Q + R Sbjct: 1430 ATKSFNKIDSPMQVYLISTKAGGLGLNI-PGANRVVIFDFAFNPTWEEQAVGR-----AY 1483 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + G ++ VFVY IA T ++++ + K+ + +++ Sbjct: 1484 RFGQRKPVFVYRFIAGGTYEDIMYNKTVFKTQLSFRVVD 1522 >gi|116202151|ref|XP_001226887.1| hypothetical protein CHGG_08960 [Chaetomium globosum CBS 148.51] gi|88177478|gb|EAQ84946.1| hypothetical protein CHGG_08960 [Chaetomium globosum CBS 148.51] Length = 890 Score = 78.8 bits (193), Expect = 4e-13, Method: Composition-based stats. Identities = 34/165 (20%), Positives = 58/165 (35%), Gaps = 19/165 (11%) Query: 50 EVHDEKIKALEVII-EKANAAPIIVAYHFNSDLA------RLQKAFPQGRTLDKDPCTIQ 102 + KI+ L I+ ++A+ IV F S L R Q R K P + Sbjct: 666 VMTSAKIRELLSILRKEASVHKFIVFSQFTSMLDLVEPFLRAQPGLKAVRYDGKMPNDAR 725 Query: 103 E------WNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 E + +L GLNL +V +W+ +Q I+R+ Sbjct: 726 EAALRALRTDPHTRILLCSLKCGSLGLNLT-AATRVVIVEPFWNPFVEEQAIDRV----- 779 Query: 157 RQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 + V VY L +T++ +L K + + L ++ Sbjct: 780 HRLTQTVDVVVYKLTVADTVEARILALQDKKRRLAEATLEGGSRK 824 >gi|197387226|ref|NP_001127992.1| helicase ARIP4 [Rattus norvegicus] gi|149018631|gb|EDL77272.1| Rad54 like 2 (S. cerevisiae) (predicted) [Rattus norvegicus] Length = 1299 Score = 78.8 bits (193), Expect = 4e-13, Method: Composition-based stats. Identities = 32/180 (17%), Positives = 64/180 (35%), Gaps = 39/180 (21%) Query: 52 HDEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQK----------------------- 86 + K+ L +IE++ I+V S LA +++ Sbjct: 718 NSPKMVLLFHLIEESVKLGDKILVFSQSLSTLALIEEFLGKRDMPCPPGAEGQGAQKWVR 777 Query: 87 -----AFPQGRTLDKDPCTIQEWNEGKIP---LLFAHPASCGHGLNLQYGGNILVFFSLW 138 + I ++N+ L + G+NL G N +V F Sbjct: 778 NVSYFRLDGSTPAFERERLINQFNDPSNLTTWLFLLSTRAGCLGVNL-IGANRVVVFDAS 836 Query: 139 WDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNAL 198 W+ Q + R + G K+ ++Y L+A T+++ + R +K + D +++ L Sbjct: 837 WNPCHDAQAV-----CRVYRYGQKKPCYIYRLVADYTLEKKIYDRQISKQGMSDRVVDDL 891 >gi|149055561|gb|EDM07145.1| alpha thalassemia/mental retardation syndrome X-linked homolog (human) [Rattus norvegicus] Length = 883 Score = 78.8 bits (193), Expect = 4e-13, Method: Composition-based stats. Identities = 36/205 (17%), Positives = 75/205 (36%), Gaps = 33/205 (16%) Query: 9 RELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKI---KALEVIIE- 64 ++ D E +E + L++A +E V + + +E +E Sbjct: 394 KDFVTDADAEVLEHSGKMVLLFEILRMA------EEIGDKVLVFSQSLISLDLIEDFLEL 447 Query: 65 ------KANAAPIIVAYHFNSD---LARLQKAFPQGRTLDKDPCT-IQEWNEGKI---PL 111 + P+I + + L + G T + +E+N+ L Sbjct: 448 ASREKTEDKDKPLI----YKGEGKWLRNIDYYRLDGSTNAQSRKKWAEEFNDETNVRGRL 503 Query: 112 LFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLI 171 + G+NL N ++ F W+ Q I R+ + G + V+VY + Sbjct: 504 FIISTKAGSLGINL-VAANRVIIFDASWNPSYDIQSIFRV-----YRFGQTKPVYVYRFL 557 Query: 172 AQNTIDELVLQRLRTKSTIQDLLLN 196 AQ T+++ + R TK ++ +++ Sbjct: 558 AQGTMEDKIYDRQVTKQSLSFRVVD 582 >gi|259479572|tpe|CBF69917.1| TPA: single-stranded DNA-dependent ATPase (Eurofung) [Aspergillus nidulans FGSC A4] Length = 1170 Score = 78.8 bits (193), Expect = 4e-13, Method: Composition-based stats. Identities = 36/210 (17%), Positives = 69/210 (32%), Gaps = 31/210 (14%) Query: 21 EAFNSASKTVKCLQLANG----------AVYYDEEKHWKEVHDEKIKALEV---IIEKAN 67 A +A ++ A Y K + + E + E Sbjct: 954 SAITAAGLQDYLMEQAREKQTRKQAKVLGEYEGPHTKTKALLSHLLATAEESAKLPEGEA 1013 Query: 68 AAPIIVAYHFNSDLARLQ-KAFPQGRT----------LDKDPCTIQEWNEGK-IPLLFAH 115 +V + S L ++ QG T L + + + +L A Sbjct: 1014 PIKSVVFSAWTSHLDLIEIALRDQGLTGYTRLDGTMSLPARNKALDNFRDDNNTTILLAT 1073 Query: 116 PASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNT 175 + G GLNL ++ + ++ Q I+R+ + G R V I +++ Sbjct: 1074 IGAGGVGLNLTAASHVYIM-EPQYNPAAVAQAIDRV-----HRLGQTREVTTVQFIMKDS 1127 Query: 176 IDELVLQRLRTKSTIQDLLLNALKKETIHV 205 I+E + + + K + D+ LN K + V Sbjct: 1128 IEEKIAELAKKKQQLADMSLNRGKLDKAEV 1157 >gi|221057618|ref|XP_002261317.1| DNA helicase [Plasmodium knowlesi strain H] gi|194247322|emb|CAQ40722.1| DNA helicase, putative [Plasmodium knowlesi strain H] Length = 875 Score = 78.8 bits (193), Expect = 4e-13, Method: Composition-based stats. Identities = 40/160 (25%), Positives = 66/160 (41%), Gaps = 20/160 (12%) Query: 54 EKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQKAFPQGR----------TLDKDPCTI 101 K+KA++ I ++ H + + K + + +DK I Sbjct: 614 AKVKAIKEYITYLIDADIKFLLFCHHKLVMDEIDKFLTEKKCMFIRIDGLTPIDKRELYI 673 Query: 102 QEW-NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 + + N+ KI + +CG GLNL N +VF L+W + Q +R + G Sbjct: 674 KSFQNDDKIKIALLSLTACGLGLNLT-AANTVVFGELYWVPGQIIQAEDR-----AHRIG 727 Query: 161 FKRAVF-VYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 V ++YLIAQ TIDE V + + K LN ++ Sbjct: 728 TTHEVINIHYLIAQKTIDETVWRIINRKWNTLTTALNGME 767 >gi|121713876|ref|XP_001274549.1| DNA excision repair protein (Rad5), putative [Aspergillus clavatus NRRL 1] gi|119402702|gb|EAW13123.1| DNA excision repair protein (Rad5), putative [Aspergillus clavatus NRRL 1] Length = 1252 Score = 78.8 bits (193), Expect = 4e-13, Method: Composition-based stats. Identities = 23/84 (27%), Positives = 35/84 (41%), Gaps = 6/84 (7%) Query: 111 LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYL 170 +L + G GLNL N+ + WW Q I+R+ + G R V V Sbjct: 1149 VLLISLRAGGVGLNLTVASNVFMM-DPWWSFAIEAQAIDRV-----HRMGQLRDVAVTRF 1202 Query: 171 IAQNTIDELVLQRLRTKSTIQDLL 194 I +++I+ +LQ K I L Sbjct: 1203 IVKDSIEGRMLQVQERKMNIAGSL 1226 >gi|328860513|gb|EGG09619.1| hypothetical protein MELLADRAFT_95838 [Melampsora larici-populina 98AG31] Length = 1765 Score = 78.8 bits (193), Expect = 4e-13, Method: Composition-based stats. Identities = 25/151 (16%), Positives = 52/151 (34%), Gaps = 24/151 (15%) Query: 68 AAPIIVAYHFNSDLARLQKAFPQGRTLD---------------KDPCTIQEWNEGKIP-- 110 I++ F L + + F +G I +N Sbjct: 1100 GHRILIFSQFTIFLD-IMERFLEGEERPYLRLSTLQDGTTSQLDRQTRIDAFNRPNSNHN 1158 Query: 111 LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYL 170 L + G G+NL + ++ ++ Q I R + G K+ V V+ L Sbjct: 1159 LFLLSTRAGGAGINL-ATADTVIILDPDYNPHNDLQAISR-----AHRFGQKKPVNVFKL 1212 Query: 171 IAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 + + +E ++Q + K + L++ + +E Sbjct: 1213 MTSASAEERIVQMGKRKLVLDHLVIQKVSEE 1243 >gi|146165350|ref|XP_001014826.2| SNF2 family N-terminal domain containing protein [Tetrahymena thermophila] gi|146145551|gb|EAR94494.2| SNF2 family N-terminal domain containing protein [Tetrahymena thermophila SB210] Length = 1612 Score = 78.8 bits (193), Expect = 4e-13, Method: Composition-based stats. Identities = 38/226 (16%), Positives = 81/226 (35%), Gaps = 36/226 (15%) Query: 1 MKQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVY-----------YDEEKHWK 49 +K Y + D + +N F+ + + + N D+ + Sbjct: 930 VKNYDNLK---LLDAKSKNFSKFSLLNILMSLRLVCNHPSLFLYKKKYLIPKKDKFQEEF 986 Query: 50 EVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQKAFP-----------QGRTLDK 96 K+K LE +I K +++ F L + + F +D+ Sbjct: 987 VDCSNKLKFLERMIPKLLQQNHKMLIFSQFTMMLDIMGEFFNFKGWAFERLDGTTSVIDR 1046 Query: 97 DPCTIQEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 TI +N K + + G G+NL + + F ++ Q I R Sbjct: 1047 Q-KTIDSFNSKDSKAKIFLLSTRAGGLGINLT-SADTIFFTDSDFNPYRDVQAISR---- 1100 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKK 200 + G + V VY L+++ + +E +++ K ++ +++N + K Sbjct: 1101 -AYRMGQESKVKVYRLVSKYSAEERIIEIATRKLLLESIIINPINK 1145 >gi|167517741|ref|XP_001743211.1| hypothetical protein [Monosiga brevicollis MX1] gi|163778310|gb|EDQ91925.1| predicted protein [Monosiga brevicollis MX1] Length = 689 Score = 78.8 bits (193), Expect = 4e-13, Method: Composition-based stats. Identities = 28/152 (18%), Positives = 56/152 (36%), Gaps = 18/152 (11%) Query: 55 KIKALEVIIEKANAA--PIIVAYHFNSDLARLQKAF-PQGRTLDK---------DPCTIQ 102 K+ L ++ + +++ + L +Q A QGRT + + Sbjct: 502 KLAILMQLLARWEKEQLSVVIFSYTTRLLNIIQDALSLQGRTPLRIDGQVSARDRHAVVA 561 Query: 103 EWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFK 162 ++ +L + G G+NLQ +++ W+ Q R + G + Sbjct: 562 KFQARDERILLVSTHAGGEGINLQAASKVVI-VDPCWNPARDLQA-----QDRAYRLGTE 615 Query: 163 RAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 V V L+ T++ELV R K + ++ Sbjct: 616 HDVEVLRLVTAGTLEELVYARQVYKLQLARMV 647 >gi|134118954|ref|XP_771980.1| hypothetical protein CNBN1600 [Cryptococcus neoformans var. neoformans B-3501A] gi|50254584|gb|EAL17333.1| hypothetical protein CNBN1600 [Cryptococcus neoformans var. neoformans B-3501A] Length = 1060 Score = 78.8 bits (193), Expect = 4e-13, Method: Composition-based stats. Identities = 28/101 (27%), Positives = 39/101 (38%), Gaps = 15/101 (14%) Query: 96 KDPCTIQEWN--EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGV 153 + I + E ++ + G GLNL N +V F W + Sbjct: 717 ERQEMIDRFQDLERDHFIMLISTRAGGVGLNLT-AANKVVIFDPSWTM------------ 763 Query: 154 TRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 R + G KR V VY LI Q TI+EL+ +R K L Sbjct: 764 DRAFRIGQKRTVEVYRLIGQGTIEELIYERQVQKQQSARQL 804 >gi|156554595|ref|XP_001604594.1| PREDICTED: hypothetical protein [Nasonia vitripennis] Length = 1968 Score = 78.8 bits (193), Expect = 4e-13, Method: Composition-based stats. Identities = 22/102 (21%), Positives = 43/102 (42%), Gaps = 7/102 (6%) Query: 96 KDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 + I E+N K+ L + G+NL G N + F W+ Q + Sbjct: 1028 EREKLINEFNVNPKVHLFLVSTRAGSLGINL-VGANRAIVFDASWNPCHDTQAV-----C 1081 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 R + G ++ +VY L+ N ++ + R +K + D +++ Sbjct: 1082 RVYRYGQQKNCYVYRLVTDNCLERKIYDRQISKQGMADRVVD 1123 >gi|123506672|ref|XP_001329249.1| Type III restriction enzyme, res subunit family protein [Trichomonas vaginalis G3] gi|121912202|gb|EAY17026.1| Type III restriction enzyme, res subunit family protein [Trichomonas vaginalis G3] Length = 871 Score = 78.8 bits (193), Expect = 4e-13, Method: Composition-based stats. Identities = 28/157 (17%), Positives = 60/157 (38%), Gaps = 20/157 (12%) Query: 55 KIKALEVIIEKA--NAAPIIVAYHFNSDLARLQ----------KAFPQGRTLDKDPCTIQ 102 K++ L+VI++K ++ + S + L+ T + I+ Sbjct: 620 KLQLLDVILQKLITTGHRFLIYSQWTSMMDLLEIYLNWRKIETSRIDGSVTTSERSRLIK 679 Query: 103 EWNEGKIPL--LFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 + P+ + S GLNLQ + ++ F ++ Q R+ + G Sbjct: 680 SFVVPGSPVKGMLLSTRSSAFGLNLQ-AADTVILFDSDYNPFIELQASARV-----HRMG 733 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 +V + L+ +T +E +L+ R K + ++ A Sbjct: 734 QTNSVVIVRLMTNDTGEEHILRIARRKFKMGQQIITA 770 >gi|118576973|ref|YP_876716.1| superfamily II DNA/RNA helicase, SNF2 family [Cenarchaeum symbiosum A] gi|118195494|gb|ABK78412.1| superfamily II DNA/RNA helicase, SNF2 family [Cenarchaeum symbiosum A] Length = 574 Score = 78.8 bits (193), Expect = 4e-13, Method: Composition-based stats. Identities = 32/107 (29%), Positives = 48/107 (44%), Gaps = 7/107 (6%) Query: 91 GRTLDKDPCT-IQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIE 149 G D+ I + EG+ L+ A + G+NL ++F L W H+Q + Sbjct: 443 GGQSDRSRQDQIDSFQEGRSKLMIAGLRAGNVGINLSR-ARYVIFAELDWSPAIHRQAED 501 Query: 150 RIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 R+ + G K VF YYLI T+DE V L KS D +++ Sbjct: 502 RL-----HRIGQKNTVFAYYLIGNGTLDEHVANILVDKSYEIDSIMD 543 >gi|47209275|emb|CAF89705.1| unnamed protein product [Tetraodon nigroviridis] Length = 2968 Score = 78.8 bits (193), Expect = 4e-13, Method: Composition-based stats. Identities = 20/112 (17%), Positives = 42/112 (37%), Gaps = 9/112 (8%) Query: 90 QGRTL-DKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 GR + I ++ + + G G+NL + + F W+ + Q Sbjct: 1396 DGRVRGNLRQAAIDRFSRPDSDRFVFLLCTRAGGLGINLT-AADTCIIFDSDWNPQNDLQ 1454 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNAL 198 R + G +AV +Y LI +N+ + + + K + +L ++ Sbjct: 1455 AQARC-----HRIGQSKAVKIYRLITRNSYEREMFDKASLKLGLDKAVLQSM 1501 >gi|324500516|gb|ADY40241.1| Transcriptional regulator ATRX [Ascaris suum] Length = 1617 Score = 78.8 bits (193), Expect = 4e-13, Method: Composition-based stats. Identities = 38/211 (18%), Positives = 75/211 (35%), Gaps = 36/211 (17%) Query: 9 RELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANA 68 R Y + N S + K + L +E V + I++L +I Sbjct: 1179 RGWYAETGLVTEADENDFSLSNKLMLLVQIVKKCEEIGDKILVFSQSIESLTLI------ 1232 Query: 69 APIIVAYHFNSDL------ARLQKA-----FPQGRTL---------DKDPCTIQEWNEGK 108 ++ Y + DL ++ A + +GR K ++N Sbjct: 1233 -KRMLHYMDSHDLWFSDGHEAIKSANETWGWIEGRDYMVIDGQVQSGKRQEVQTKFNNPN 1291 Query: 109 I---PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 L+ + G N+ N ++ F W+ Q + R+ + G + V Sbjct: 1292 NLRARLMLISTRAGSLGTNM-VAANRVIIFDACWNPSHDTQSLFRV-----YRFGQTKPV 1345 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 ++Y IAQ T++E + +R TK + +++ Sbjct: 1346 YIYRFIAQGTMEERIYKRQVTKESTALRVID 1376 >gi|270010403|gb|EFA06851.1| hypothetical protein TcasGA2_TC009794 [Tribolium castaneum] Length = 1540 Score = 78.8 bits (193), Expect = 4e-13, Method: Composition-based stats. Identities = 32/192 (16%), Positives = 62/192 (32%), Gaps = 42/192 (21%) Query: 41 YYDEEKHWKEVHDEKIKALEVIIEKAN--AAPIIVAYH-------FNSDLARLQKAFPQG 91 Y D ++ H K+ L I+++ ++V L R+ A G Sbjct: 1133 YCDGDELNNIAHSSKLFLLFEILKECEQIGDKVLVFSQSLYSLNIIEYFLGRIHDATQAG 1192 Query: 92 RTL------------------------DKDPCTIQEWNEG---KIPLLFAHPASCGHGLN 124 T D + +N + L + G G+N Sbjct: 1193 ETDSVGGYSGSWCVGLDYFRLDGSSSCDSRSMWCRTFNNPTNTRARLFLISTKAGGLGIN 1252 Query: 125 LQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRL 184 L N ++ F + W+ Q I R + G + ++Y + T++ + +R Sbjct: 1253 L-VAANRVIIFDVSWNPSHDIQSI-----YRVYRFGQTKPCYIYRFVTLGTMEMKIYERQ 1306 Query: 185 RTKSTIQDLLLN 196 TK I +++ Sbjct: 1307 VTKQAISKRVID 1318 >gi|70954393|ref|XP_746245.1| DNA helicase [Plasmodium chabaudi chabaudi] gi|56526791|emb|CAH81164.1| DNA helicase, putative [Plasmodium chabaudi chabaudi] Length = 1024 Score = 78.8 bits (193), Expect = 4e-13, Method: Composition-based stats. Identities = 39/236 (16%), Positives = 77/236 (32%), Gaps = 47/236 (19%) Query: 3 QYHKFQRELYCDL-QGENIEAFNSASKTVKCLQLANGAVYYDEEKHW---KEVHDEKIKA 58 Y + + + + + + + + ++ ++ N + K + Sbjct: 637 LYKQIEEKTFKQVNSDGTVNTKSFQNTIMQLRKIVNHPFLFTNNYDINDCIIKSSGKFEV 696 Query: 59 LEVIIEKA--NAAPIIVAYHFNS---------DLARLQKAFPQGRT-LDKDPCTIQEWNE 106 L+ +I K I++ +L R + G L I +NE Sbjct: 697 LDRMIPKLIKFKHKILLFCQMTRVMDILCDYFELRRYKYHRLDGSVSLSDRRQIIDNFNE 756 Query: 107 GK-------------------------IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDL 141 K + S G GLNLQ + ++ F ++ Sbjct: 757 PKSVNNCKEIDQNDINDLSNQELDTDEAMIFILSTRSGGLGLNLQ-AADTVIIFDSDFNP 815 Query: 142 EEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + Q + R + G K V V+ I ++++ELV QR + K I D ++ A Sbjct: 816 HQDIQAMCRC-----HRIGQKNVVKVFRFITLSSVEELVFQRAKDKLNINDKVIQA 866 >gi|159112449|ref|XP_001706453.1| DNA repair and recombination protein Rhp26p [Giardia lamblia ATCC 50803] gi|157434550|gb|EDO78779.1| DNA repair and recombination protein Rhp26p [Giardia lamblia ATCC 50803] Length = 930 Score = 78.8 bits (193), Expect = 4e-13, Method: Composition-based stats. Identities = 31/140 (22%), Positives = 54/140 (38%), Gaps = 15/140 (10%) Query: 58 ALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEW-NEGKIPLLFAHP 116 + I+EKA ++ F + R+ P +D P I ++ + +I L Sbjct: 569 MMLNIVEKA----LLETASFKNAYLRMDGNIP----VDARPALISKFSTDPQIRLFLLTT 620 Query: 117 ASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTI 176 G GLNL N + + W+ Q +ER + + V VY + TI Sbjct: 621 RVGGLGLNLT-AANHVFLLNPNWNPTIDDQSVERCW-----RITQTKKVIVYKVFTGGTI 674 Query: 177 DELVLQRLRTKSTIQDLLLN 196 +E + R K + +L+ Sbjct: 675 EEKIFNRQIYKRLLVSRVLD 694 >gi|313238286|emb|CBY13372.1| unnamed protein product [Oikopleura dioica] Length = 1487 Score = 78.8 bits (193), Expect = 4e-13, Method: Composition-based stats. Identities = 28/125 (22%), Positives = 54/125 (43%), Gaps = 14/125 (11%) Query: 76 HFNS-DLARLQKAFPQGRTLDKDPCTIQEWNEGKIP---LLFAHPASCGHGLNLQYGGNI 131 + + D R+ T K I+ +N+ + P L + G G NL G N Sbjct: 1137 WYKNIDYFRI----DGSVTAAKRTTFIESFNDLEDPRARLFLVSTKAGGIGTNL-VGANR 1191 Query: 132 LVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQ 191 ++ F W+ Q + R+ + G ++VFVY + T++E + +R KS++ Sbjct: 1192 VIIFDSSWNPAHDVQSLFRV-----YRFGQTKSVFVYRFVGHGTMEEKIYERQVNKSSLG 1246 Query: 192 DLLLN 196 +++ Sbjct: 1247 LRVVD 1251 >gi|56384753|gb|AAQ24521.2| Rad26 [Giardia intestinalis] Length = 925 Score = 78.8 bits (193), Expect = 4e-13, Method: Composition-based stats. Identities = 31/140 (22%), Positives = 54/140 (38%), Gaps = 15/140 (10%) Query: 58 ALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEW-NEGKIPLLFAHP 116 + I+EKA ++ F + R+ P +D P I ++ + +I L Sbjct: 564 MMLNIVEKA----LLETASFKNAYLRMDGNIP----VDARPALISKFSTDPQIRLFLLTT 615 Query: 117 ASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTI 176 G GLNL N + + W+ Q +ER + + V VY + TI Sbjct: 616 RVGGLGLNLT-AANHVFLLNPNWNPTIDDQSVERCW-----RITQTKKVIVYKVFTGGTI 669 Query: 177 DELVLQRLRTKSTIQDLLLN 196 +E + R K + +L+ Sbjct: 670 EEKIFNRQIYKRLLVSRVLD 689 >gi|71409960|ref|XP_807298.1| DNA excision repair protein [Trypanosoma cruzi strain CL Brener] gi|70871269|gb|EAN85447.1| DNA excision repair protein, putative [Trypanosoma cruzi] Length = 1114 Score = 78.8 bits (193), Expect = 4e-13, Method: Composition-based stats. Identities = 33/198 (16%), Positives = 68/198 (34%), Gaps = 22/198 (11%) Query: 10 ELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIE--KAN 67 E + D + + + + +K + ++ + K++ L+ ++ + Sbjct: 760 EYFDDNEEDETDGVDGKTKRRRGSHMS-----LRSNRLVNYSGSGKLQTLQKLLTVWQRG 814 Query: 68 AAPIIVAYHFNSDLARLQKAFPQGRTL----------DKDPCTIQEWNEGKIPLLFAHPA 117 ++V L ++ Q + +NE + Sbjct: 815 GQRVLVFSQTRMALDIIENMCEQEGFKYIRMDGSTSGHHRQELMDRFNEDDSIVAALLTT 874 Query: 118 SCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 G G N +V F W+ +Q ER + G R V VY LIA T++ Sbjct: 875 RVGGVGVNLVGANRVVLFDPDWNPVTDEQARERAW-----RIGQTRDVGVYRLIASGTVE 929 Query: 178 ELVLQRLRTKSTIQDLLL 195 E +L+R K+ + + +L Sbjct: 930 EAILRRQLAKTYVTEKVL 947 >gi|313895657|ref|ZP_07829213.1| SNF2 family N-terminal domain protein [Selenomonas sp. oral taxon 137 str. F0430] gi|312975783|gb|EFR41242.1| SNF2 family N-terminal domain protein [Selenomonas sp. oral taxon 137 str. F0430] Length = 403 Score = 78.8 bits (193), Expect = 5e-13, Method: Composition-based stats. Identities = 20/92 (21%), Positives = 42/92 (45%), Gaps = 3/92 (3%) Query: 1 MKQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 +K Y +RE Y +L + N +K ++ QL G + D++ + K+ AL Sbjct: 272 VKVYKNLERESYAELACGEVSTVNVLTKLLRLSQLTGGFI-TDDDGSAHPISTAKLDALS 330 Query: 61 VIIEK--ANAAPIIVAYHFNSDLARLQKAFPQ 90 II+ ++ +++ F ++L +Q + Sbjct: 331 DIIDTVMSDGKKLVIMARFVAELDAIQDLLDK 362 >gi|149412153|ref|XP_001506490.1| PREDICTED: similar to hCG1997495 [Ornithorhynchus anatinus] Length = 1466 Score = 78.8 bits (193), Expect = 5e-13, Method: Composition-based stats. Identities = 33/180 (18%), Positives = 65/180 (36%), Gaps = 39/180 (21%) Query: 52 HDEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQKAFPQGR---TLDKDPCTIQEW-- 104 + K+ L +IE++ I+V S L+ +++ + D D IQ W Sbjct: 715 NSPKMVLLFHLIEESVKLGDKILVFSQSLSTLSVIEEFLAKRSMPCLPDSDGQGIQNWVR 774 Query: 105 --------------------------NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLW 138 + + L + G+NL G N +V F Sbjct: 775 NHSYYRLDGSTSASERERLINQFNDPSSSSVWLFLLSTRAGCLGVNL-IGANRVVVFDAS 833 Query: 139 WDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNAL 198 W+ Q + R + G K+ +Y L++ T+++ + R +K + D +++ L Sbjct: 834 WNPCHDAQAV-----CRVYRYGQKKPCHIYRLVSDFTLEKKIYDRQISKQGMSDRVVDDL 888 >gi|189205653|ref|XP_001939161.1| DNA repair protein rad5 [Pyrenophora tritici-repentis Pt-1C-BFP] gi|187975254|gb|EDU41880.1| DNA repair protein rad5 [Pyrenophora tritici-repentis Pt-1C-BFP] Length = 1192 Score = 78.4 bits (192), Expect = 5e-13, Method: Composition-based stats. Identities = 35/162 (21%), Positives = 60/162 (37%), Gaps = 21/162 (12%) Query: 50 EVHDEKIKALEVII----EKANAAPIIVAYHFNSDLARLQKAFPQGR----------TLD 95 K A++ I ++ IIV F + + L++ F +L Sbjct: 1006 VFPSAKTIAVKSQILNWQKEKADVKIIVYTQFLAMIRILKRVFATEGWTCEEYHGKMSLK 1065 Query: 96 KDPCTIQEWNEGKIPL-LFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 K I + + P+ L A G GLNL + ++ WW+ QQ Sbjct: 1066 KRDDAIAAFADTAGPVILLASLRCGGLGLNLTM-ASKVIMIDPWWNSASEQQA-----FC 1119 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 R + G F+ L +NT+DE ++Q K D+++ Sbjct: 1120 RVFRIGQNEKTFMSRLCVKNTVDEHLVQMQERKQEEIDVVME 1161 >gi|329764968|ref|ZP_08256555.1| SNF2-related protein [Candidatus Nitrosoarchaeum limnia SFB1] gi|329138505|gb|EGG42754.1| SNF2-related protein [Candidatus Nitrosoarchaeum limnia SFB1] Length = 574 Score = 78.4 bits (192), Expect = 5e-13, Method: Composition-based stats. Identities = 29/110 (26%), Positives = 50/110 (45%), Gaps = 6/110 (5%) Query: 87 AFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 + G++ I ++ +G+ L+ A + G+NL ++F L W H+Q Sbjct: 445 SIIGGQSDKMRQEAIDKFQKGESKLMIAGLRAGNVGINLTR-AKYVIFAELDWSPAIHRQ 503 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 +R+ + G K VF YYLI T+D+ V L KS D +++ Sbjct: 504 AEDRL-----HRIGQKNTVFAYYLIGNGTLDDHVANILVDKSYEIDSIMD 548 >gi|307566197|ref|ZP_07628648.1| SNF2 family N-terminal domain protein [Prevotella amnii CRIS 21A-A] gi|307345090|gb|EFN90476.1| SNF2 family N-terminal domain protein [Prevotella amnii CRIS 21A-A] Length = 1090 Score = 78.4 bits (192), Expect = 5e-13, Method: Composition-based stats. Identities = 30/133 (22%), Positives = 59/133 (44%), Gaps = 15/133 (11%) Query: 72 IVAYHFNSDLARLQKAFP-----QGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQ 126 +V ++ D++ + P Q + L + N ++ P + G GLN+ Sbjct: 794 VVFRRYDLDISIINGETPATAKVQSQKLSRQQTVDNFQNAEGFNIIIMSPLAAGMGLNIT 853 Query: 127 YGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYY--LIAQN--TIDELVLQ 182 G N ++ +S +W+ + QQ +R + G K+ V VYY ++++ T D ++ Sbjct: 854 -GANNVIHYSRFWNPAKEQQATDR-----AYRIGQKKDVNVYYPMSVSKDFRTFDVIIDA 907 Query: 183 RLRTKSTIQDLLL 195 L K+ + D L Sbjct: 908 LLAKKAELADATL 920 >gi|302834136|ref|XP_002948631.1| hypothetical protein VOLCADRAFT_58399 [Volvox carteri f. nagariensis] gi|300266318|gb|EFJ50506.1| hypothetical protein VOLCADRAFT_58399 [Volvox carteri f. nagariensis] Length = 584 Score = 78.4 bits (192), Expect = 5e-13, Method: Composition-based stats. Identities = 17/77 (22%), Positives = 33/77 (42%), Gaps = 6/77 (7%) Query: 114 AHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQ 173 + G+NL N +V LWW+ +Q I+R + G R V V + Sbjct: 482 VSLKAAALGVNLTV-ANHVVLMDLWWNPTTEEQAIDR-----AHRIGQTRTVHVTRITIA 535 Query: 174 NTIDELVLQRLRTKSTI 190 ++++ +L+ + K + Sbjct: 536 GSVEDRILELQQVKREL 552 >gi|119481535|ref|XP_001260796.1| SNF2 family helicase/ATPase, putative [Neosartorya fischeri NRRL 181] gi|119408950|gb|EAW18899.1| SNF2 family helicase/ATPase, putative [Neosartorya fischeri NRRL 181] Length = 1194 Score = 78.4 bits (192), Expect = 5e-13, Method: Composition-based stats. Identities = 33/172 (19%), Positives = 62/172 (36%), Gaps = 28/172 (16%) Query: 50 EVHDEKIKAL-EVIIEKANAAPII---------VAYHFNSDLARLQKAFPQGR------- 92 E K KAL + E A + + V + S L ++ A Sbjct: 1010 EGPHTKTKALLAHLAESAEESKRLNAEPPIKSVVFSAWTSHLDLIEIALKDRGMTGFTRL 1069 Query: 93 ----TLDKDPCTIQEW-NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQM 147 +L ++++ G +L A + G GLNL + + ++ Q Sbjct: 1070 DGTMSLAARNRALEDFHTNGNTTILLATIGAGGVGLNLTSASKVYIM-EPQYNPAAVAQA 1128 Query: 148 IERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 I+R+ + G R V I + +I+E + + + K + D+ +N K Sbjct: 1129 IDRV-----HRLGQTREVTTVQFIMKGSIEEKIFELAKKKQQLADMSMNRGK 1175 >gi|123427014|ref|XP_001307162.1| SNF2 family N-terminal domain containing protein [Trichomonas vaginalis G3] gi|121888775|gb|EAX94232.1| SNF2 family N-terminal domain containing protein [Trichomonas vaginalis G3] Length = 1535 Score = 78.4 bits (192), Expect = 5e-13, Method: Composition-based stats. Identities = 27/154 (17%), Positives = 51/154 (33%), Gaps = 19/154 (12%) Query: 54 EKIKALEVIIEKANAAPIIVAYHFNSDLARLQKA---------FPQGRT-LDKDPCTIQE 103 + + + I +K N +++ L L + G+ D I Sbjct: 769 QFLDLILPIFKKQN-RSVLIFSQRIKVLQLLAEYCQLRKYTYVMLDGQLSADDKKTAIDS 827 Query: 104 W--NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGF 161 + + + + S GLNL ++ F W+ Q + R + G Sbjct: 828 FVSDNSDVFIFLISTKSGAEGLNLTKASVTII-FDPDWNPNNDLQALGRC-----HRIGQ 881 Query: 162 KRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 + V V LI T + + R + K + D +L Sbjct: 882 TKRVLVLRLITFGTYEHTMYTRAQKKLKLWDAVL 915 >gi|324998247|ref|ZP_08119359.1| helicase domain-containing protein [Pseudonocardia sp. P1] Length = 688 Score = 78.4 bits (192), Expect = 5e-13, Method: Composition-based stats. Identities = 26/111 (23%), Positives = 47/111 (42%), Gaps = 7/111 (6%) Query: 92 RTLDKDPCTIQEW-NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 +T I + N+ + + + G G+NLQ +I V L W E Q I+R Sbjct: 555 QTAAARQRNIDAFTNDPDVAVAVCSLTAAGVGINLQVASDI-VLAELSWTAAEQTQAIDR 613 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 + G V + +IA TID + + + K+ + D L+ ++ + Sbjct: 614 C-----HRIGQTAPVTAWRVIAAQTIDARIAELIDGKAGLADQALDGIEDD 659 >gi|238917469|ref|YP_002930986.1| hypothetical protein EUBELI_01547 [Eubacterium eligens ATCC 27750] gi|238872829|gb|ACR72539.1| Hypothetical protein EUBELI_01547 [Eubacterium eligens ATCC 27750] Length = 69 Score = 78.4 bits (192), Expect = 5e-13, Method: Composition-based stats. Identities = 25/57 (43%), Positives = 34/57 (59%), Gaps = 1/57 (1%) Query: 37 NGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRT 93 NGA+Y D E HD K+ ALE IIE +N P++VAY F DL+R+++ F Sbjct: 14 NGAIYSD-TGEIIEFHDRKLDALEDIIESSNGKPVLVAYWFKHDLSRIKERFDVREI 69 >gi|115472213|ref|NP_001059705.1| Os07g0497000 [Oryza sativa Japonica Group] gi|113611241|dbj|BAF21619.1| Os07g0497000 [Oryza sativa Japonica Group] Length = 622 Score = 78.4 bits (192), Expect = 5e-13, Method: Composition-based stats. Identities = 24/160 (15%), Positives = 59/160 (36%), Gaps = 21/160 (13%) Query: 52 HDEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQ------------KAFPQGRTLDKD 97 K+ L +++ + +++ L L+ + ++ + Sbjct: 288 ASAKLTLLHSMLKILHKDGHRVLIFSQMTKLLDILEDYLTWEFGPKTFERVDGSVSVAER 347 Query: 98 PCTIQEWNEGKIP-LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 I +N+ K + SCG G+NL + ++ + ++ Q + R Sbjct: 348 QAAIARFNQDKSRFVFLLSTRSCGLGINL-ATADTVIIYDSDFNPHADIQAMNR-----A 401 Query: 157 RQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + G + VY L+ + +++E +L + K + L +N Sbjct: 402 HRIGQSNRLLVYRLVVRASVEERILHLAKKKLMLDQLFVN 441 >gi|315505011|ref|YP_004083898.1| snf2-related protein [Micromonospora sp. L5] gi|315411630|gb|ADU09747.1| SNF2-related protein [Micromonospora sp. L5] Length = 621 Score = 78.4 bits (192), Expect = 5e-13, Method: Composition-based stats. Identities = 38/195 (19%), Positives = 77/195 (39%), Gaps = 22/195 (11%) Query: 7 FQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKA 66 + E + ++ A+ A + K + AV +E K++ L ++++A Sbjct: 383 IEVEDWVEMGRAEARAYRQAVQDRKFASMRRAAVVTNESAVP-----AKVERLREVVQEA 437 Query: 67 NAA--PIIVAYHFNSDLARLQKAFPQGRTL--------DKDPCTIQEWNEGK-IPLLFAH 115 ++V +F L R++ + T + E++ +L + Sbjct: 438 ADNQWKVVVFSYFLEVLDRVRASLHDSPTFLLTGAIAPAARQQVVDEFSALDGHAVLISQ 497 Query: 116 PASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNT 175 G GLNL +++V +Q I R + G R V V+ L+A+NT Sbjct: 498 ITVGGVGLNL-PAASVVVLTEPQLTPAAEEQAIRRC-----YRMGQTRGVRVHRLLARNT 551 Query: 176 IDELVLQRLRTKSTI 190 +D+ +L+ L K+ + Sbjct: 552 VDQRLLEMLGRKTAL 566 >gi|168012254|ref|XP_001758817.1| SNF2 family DNA-dependent ATPase domain-containing protein [Physcomitrella patens subsp. patens] gi|162689954|gb|EDQ76323.1| SNF2 family DNA-dependent ATPase domain-containing protein [Physcomitrella patens subsp. patens] Length = 1437 Score = 78.4 bits (192), Expect = 5e-13, Method: Composition-based stats. Identities = 20/105 (19%), Positives = 42/105 (40%), Gaps = 9/105 (8%) Query: 95 DKDPCTIQEWNEGK---IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERI 151 ++ +N+ + + + G+NL N ++ F W+ Q Sbjct: 1118 KSRQELVERFNDPDNTSVQCVLISTRAGSLGINL-PAANRVIIFDGSWNPTHDLQA---- 1172 Query: 152 GVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + R + G K+ V+ Y L+A T++E + R K + +L+ Sbjct: 1173 -LFRAWRFGQKKNVYAYRLLASGTMEEKIYNRQVAKEGLAARVLD 1216 >gi|154412505|ref|XP_001579285.1| Type III restriction enzyme, res subunit family protein [Trichomonas vaginalis G3] gi|121913490|gb|EAY18299.1| Type III restriction enzyme, res subunit family protein [Trichomonas vaginalis G3] Length = 1421 Score = 78.4 bits (192), Expect = 5e-13, Method: Composition-based stats. Identities = 25/159 (15%), Positives = 53/159 (33%), Gaps = 20/159 (12%) Query: 53 DEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQKA---------FPQGRTLD-KDPCT 100 K L+ I+ K +++ F L L++ G+ D + Sbjct: 743 SAKFAWLDRILTKLKEEGHRVLIFSQFIKLLRLLKEYCTIKGYSHELLTGQMGDVEKNAA 802 Query: 101 IQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQ 158 + + + + + GLNL + + F W+ + Q R+ + Sbjct: 803 VSRFADKDTSSFVFLISTRAGSEGLNLTI-ADTAIIFDPDWNPQNDLQAQARV-----HR 856 Query: 159 AGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 G + V + LI T + + R + K + + +L Sbjct: 857 IGQTQKVDIIRLITYKTYEHEMFVRAQRKLELWERILEG 895 >gi|303285416|ref|XP_003061998.1| SNF2 super family [Micromonas pusilla CCMP1545] gi|226456409|gb|EEH53710.1| SNF2 super family [Micromonas pusilla CCMP1545] Length = 2365 Score = 78.4 bits (192), Expect = 5e-13, Method: Composition-based stats. Identities = 27/108 (25%), Positives = 50/108 (46%), Gaps = 9/108 (8%) Query: 91 GRTLDKDPC-TIQEWNE--GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQM 147 GRT+ + I +N L+ + G GLNL + +V + ++ QQ Sbjct: 1165 GRTMGAERQRVIDGFNAEGSHQFLMLVSTRAGGLGLNL-ATADTIVLYDPEFNPFIEQQA 1223 Query: 148 IERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 +R + G KR V VY L+ +++E ++Q+ + K I+ L++ Sbjct: 1224 -----QSRAHRMGQKREVAVYQLVTAGSVEERIVQKAKAKLAIERLVV 1266 >gi|52786371|ref|YP_092200.1| YqhH [Bacillus licheniformis ATCC 14580] gi|52348873|gb|AAU41507.1| YqhH [Bacillus licheniformis ATCC 14580] Length = 561 Score = 78.4 bits (192), Expect = 5e-13, Method: Composition-based stats. Identities = 38/199 (19%), Positives = 85/199 (42%), Gaps = 18/199 (9%) Query: 7 FQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVH-DEKIKALEVIIEK 65 +RE + + N + + + + V + + EV + K + +I++ Sbjct: 313 LERECCSSREAVYMTLKNMLDRKDREAPVISEPVIHHLIEKVNEVAQNSKALKVVELIQE 372 Query: 66 ANAAPIIVAYHFNSDLARLQKAFPQ---------GRTLDKDPCTIQEWNEGKIPLLFAHP 116 + +I+ + + LQ Q G +++ GK+ +L A Sbjct: 373 LDDK-VIIFTEYRATQIYLQWFLQQNGISSVPFRGGFKRGKKDWMKDLFRGKVQVLIA-T 430 Query: 117 ASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTI 176 + G G+NLQ+ N ++ + L W+ +Q I RI + G +R V++Y + ++T+ Sbjct: 431 EAGGEGINLQF-CNKIINYDLPWNPMRLEQRIGRI-----HRLGQERDVYIYNMATKHTV 484 Query: 177 DELVLQRLRTKSTIQDLLL 195 +E +L+ L K + + ++ Sbjct: 485 EEHILKLLYEKIHLFEKVV 503 >gi|302901999|ref|XP_003048558.1| hypothetical protein NECHADRAFT_47402 [Nectria haematococca mpVI 77-13-4] gi|256729491|gb|EEU42845.1| hypothetical protein NECHADRAFT_47402 [Nectria haematococca mpVI 77-13-4] Length = 455 Score = 78.4 bits (192), Expect = 5e-13, Method: Composition-based stats. Identities = 28/143 (19%), Positives = 55/143 (38%), Gaps = 17/143 (11%) Query: 52 HDEKIKAL-EVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRT-LDKDPCTIQEWNEG-K 108 H K+ A+ E I + A++ GRT + ++ + E + Sbjct: 296 HSTKLSAVVENIARSSVET--------KQSAAKIDHVLIDGRTNYSERSRRLKAFKEDSR 347 Query: 109 IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVY 168 I +L + GLNL N++ W+ Q + R + G ++AV +Y Sbjct: 348 ITVLVMSIETGAVGLNLTV-ANVVHIVEPQWNPSVEAQAVAR-----ALRMGQQKAVTIY 401 Query: 169 YLIAQNTIDELVLQRLRTKSTIQ 191 I + T++E +++ K + Sbjct: 402 RYIMKGTVEERIIELQERKKKLA 424 >gi|326332827|ref|ZP_08199085.1| ATP-dependent RNA helicase [Nocardioidaceae bacterium Broad-1] gi|325949385|gb|EGD41467.1| ATP-dependent RNA helicase [Nocardioidaceae bacterium Broad-1] Length = 735 Score = 78.4 bits (192), Expect = 5e-13, Method: Composition-based stats. Identities = 28/129 (21%), Positives = 56/129 (43%), Gaps = 8/129 (6%) Query: 71 IIVAYHFNSDLARLQKAFPQG-RTLDKDPCTIQEW-NEGKIPLLFAHPASCGHGLNLQYG 128 ++ + ++ + +G +T I E+ N+ ++ ++ + G G+NLQ Sbjct: 576 VMDTAQKLFEERGIRYSTIRGDQTSKAREKAIDEFMNDPEVEIIVCSLTAAGVGVNLQAA 635 Query: 129 GNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKS 188 N LV L W E Q I+R+ + G V + +IA TID + + + +K+ Sbjct: 636 SN-LVLAELSWTDAEQTQAIDRV-----HRIGQTEPVTAWRIIASQTIDTRIAELIDSKA 689 Query: 189 TIQDLLLNA 197 + L+ Sbjct: 690 GLAARALDG 698 >gi|242208298|ref|XP_002470000.1| predicted protein [Postia placenta Mad-698-R] gi|220730900|gb|EED84750.1| predicted protein [Postia placenta Mad-698-R] Length = 955 Score = 78.4 bits (192), Expect = 5e-13, Method: Composition-based stats. Identities = 24/107 (22%), Positives = 43/107 (40%), Gaps = 13/107 (12%) Query: 101 IQEWNEGK--IPLLFAHPASCGHGLNLQYGGNILVF------FSLWWDLEEHQQMIERIG 152 +Q +N I + + G GLNLQ +++ F W+ Q Sbjct: 676 VQMFNAPDSDIRVFILSTRAGGLGLNLQTADTVIMNNLIDDSFDSDWNPHADLQA----- 730 Query: 153 VTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 R + G + V + I + +++E + QR R K I D ++ A + Sbjct: 731 QDRAHRIGQTKVVRILRFITEKSVEESMFQRARYKLDIDDKVIQAGR 777 >gi|52080994|ref|YP_079785.1| DEAD/DEAH box helicase YqhH [Bacillus licheniformis ATCC 14580] gi|319645048|ref|ZP_07999281.1| YqhH protein [Bacillus sp. BT1B_CT2] gi|52004205|gb|AAU24147.1| DEAD/DEAH box helicase YqhH [Bacillus licheniformis ATCC 14580] gi|317392857|gb|EFV73651.1| YqhH protein [Bacillus sp. BT1B_CT2] Length = 559 Score = 78.4 bits (192), Expect = 5e-13, Method: Composition-based stats. Identities = 38/199 (19%), Positives = 85/199 (42%), Gaps = 18/199 (9%) Query: 7 FQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVH-DEKIKALEVIIEK 65 +RE + + N + + + + V + + EV + K + +I++ Sbjct: 311 LERECCSSREAVYMTLKNMLDRKDREAPVISEPVIHHLIEKVNEVAQNSKALKVVELIQE 370 Query: 66 ANAAPIIVAYHFNSDLARLQKAFPQ---------GRTLDKDPCTIQEWNEGKIPLLFAHP 116 + +I+ + + LQ Q G +++ GK+ +L A Sbjct: 371 LDDK-VIIFTEYRATQIYLQWFLQQNGISSVPFRGGFKRGKKDWMKDLFRGKVQVLIA-T 428 Query: 117 ASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTI 176 + G G+NLQ+ N ++ + L W+ +Q I RI + G +R V++Y + ++T+ Sbjct: 429 EAGGEGINLQF-CNKIINYDLPWNPMRLEQRIGRI-----HRLGQERDVYIYNMATKHTV 482 Query: 177 DELVLQRLRTKSTIQDLLL 195 +E +L+ L K + + ++ Sbjct: 483 EEHILKLLYEKIHLFEKVV 501 >gi|149537776|ref|XP_001520060.1| PREDICTED: similar to chromodomain helicase DNA binding protein 5, partial [Ornithorhynchus anatinus] Length = 1799 Score = 78.4 bits (192), Expect = 5e-13, Method: Composition-based stats. Identities = 21/156 (13%), Positives = 50/156 (32%), Gaps = 19/156 (12%) Query: 45 EKHWKEVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQ----------KAFPQGR 92 + K+ L+ +++K +++ L L+ + G Sbjct: 743 DGSSLVKSSGKLMLLQKMLKKLRDGGHRVLIFSQMTKMLDLLEDFLEYEGYKYERIDGGI 802 Query: 93 TLDKDPCTIQEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 T I +N + + G G+NL + ++ + W+ Q Sbjct: 803 TGGLRQEAIDRFNAPGAQQFCFLLSTRAGGLGINL-ATADTVIIYDSDWNPHNDIQ---- 857 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRT 186 + + G + V +Y + Q +++E + Q Sbjct: 858 VSLNHTHSIGQNKNVMIYRFLTQASVEERITQIQDN 893 >gi|154270291|ref|XP_001536001.1| predicted protein [Ajellomyces capsulatus NAm1] gi|150410015|gb|EDN05403.1| predicted protein [Ajellomyces capsulatus NAm1] Length = 1687 Score = 78.4 bits (192), Expect = 5e-13, Method: Composition-based stats. Identities = 28/162 (17%), Positives = 62/162 (38%), Gaps = 19/162 (11%) Query: 48 WKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGR----------TLD 95 W + + + IIE+ A +++ H L L+ Q + + Sbjct: 1242 WSLELSHRAQVADQIIERSIAAGDKVLLFSHSIPTLNYLELVLKQAKRSYSRLDGKTPIA 1301 Query: 96 KDPCTIQEWNEG-KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 + +N G + + G GLN+ G N ++ F ++ +Q + R Sbjct: 1302 TRQIATKNFNSGFDSQVYLISTRAGGLGLNI-PGANRVIIFDFQFNPTWEEQAVGR---- 1356 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + G + V+VY +A T ++++ R K+ + +++ Sbjct: 1357 -AYRLGQLKPVYVYRFLAGGTYEDVMHNRAVFKTQLAFRVVD 1397 >gi|328848776|gb|EGF97974.1| hypothetical protein MELLADRAFT_84130 [Melampsora larici-populina 98AG31] Length = 615 Score = 78.4 bits (192), Expect = 5e-13, Method: Composition-based stats. Identities = 15/143 (10%), Positives = 51/143 (35%), Gaps = 17/143 (11%) Query: 64 EKANAAPIIVAYHFNSDLARL-----------QKAFPQGRTLDKDPCTIQEWNEGKIPLL 112 + ++ + S + + ++ T ++ + + Sbjct: 442 KSHGGGKSVIYTQWKSFIDWIIMAFDNSGITYRQLHGDQSTFERTSQLNSFTKDPNVEAF 501 Query: 113 FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIA 172 + G GLN+ + + W+ + QQ ++R+ + G + V V++++ Sbjct: 502 VVSIEAGGVGLNMTC-ADEVYLMDAHWNPQVVQQAVDRL-----HRIGQAKPVRVFHVVT 555 Query: 173 QNTIDELVLQRLRTKSTIQDLLL 195 +I++ + + K+ + ++ Sbjct: 556 GQSIEQHLYNVQKRKAALAKRVI 578 >gi|170592673|ref|XP_001901089.1| DNA excision repair protein ERCC-6 [Brugia malayi] gi|158591156|gb|EDP29769.1| DNA excision repair protein ERCC-6, putative [Brugia malayi] Length = 147 Score = 78.4 bits (192), Expect = 5e-13, Method: Composition-based stats. Identities = 25/93 (26%), Positives = 37/93 (39%), Gaps = 7/93 (7%) Query: 104 WNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKR 163 N G I + G G+NL N +V F W+ Q ER G +R Sbjct: 9 QNNG-IFIFLLTTRVSGLGINLT-AANRVVIFDPDWNPSTDIQARERAWP-----IGQER 61 Query: 164 AVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 AV +Y L+ TI+E + K + + L+ Sbjct: 62 AVTIYRLLTGGTIEEKIYHTXIFKVFLSNRTLD 94 >gi|30686918|ref|NP_850847.1| CHR17 (CHROMATIN REMODELING FACTOR17); ATP binding / DNA binding / DNA-dependent ATPase/ helicase/ hydrolase, acting on acid anhydrides, in phosphorus-containing anhydrides / nucleic acid binding / nucleosome binding [Arabidopsis thaliana] gi|332005205|gb|AED92588.1| chromatin remodeling factor17 [Arabidopsis thaliana] Length = 1072 Score = 78.4 bits (192), Expect = 5e-13, Method: Composition-based stats. Identities = 35/220 (15%), Positives = 77/220 (35%), Gaps = 35/220 (15%) Query: 6 KFQRELYCDLQGENIEAFNSASKTVKCLQLA-----------------NGAVYYDEEKHW 48 + Q++ Y L +++E N + + L +A G Y + Sbjct: 432 QMQKQYYKALLQKDLEVVNGGGERKRLLNIAMQLRKCCNHPYLFQGAEPGPPYTTGDHLV 491 Query: 49 KEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARL---------QKAFPQGRTL-DKDP 98 + + K + +++ L L Q G T D+ Sbjct: 492 TNAGKMVLLDKLLPKLKDRDSRVLIFSQMTRLLDILEDYLMYRGYQYCRIDGNTGGDERD 551 Query: 99 CTIQEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 +I+ +N+ + + + G G+NL ++++ + W+ + Q R Sbjct: 552 ASIEAYNKPGSEKFVFLLSTRAGGLGINL-ATADVVILYDSDWNPQVDLQA-----QDRA 605 Query: 157 RQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + G K+ V V+ +N I+ V++R K + L++ Sbjct: 606 HRIGQKKEVQVFRFCTENAIEAKVIERAYKKLALDALVIQ 645 >gi|225557866|gb|EEH06151.1| conserved hypothetical protein [Ajellomyces capsulatus G186AR] Length = 1790 Score = 78.4 bits (192), Expect = 5e-13, Method: Composition-based stats. Identities = 28/162 (17%), Positives = 62/162 (38%), Gaps = 19/162 (11%) Query: 48 WKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGR----------TLD 95 W + + + IIE+ A +++ H L L+ Q + + Sbjct: 1333 WSLELSHRAQVADQIIERSIAAGDKVLLFSHSIPTLNYLELVLKQAKRSYSRLDGKTPIA 1392 Query: 96 KDPCTIQEWNEG-KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 + +N G + + G GLN+ G N ++ F ++ +Q + R Sbjct: 1393 TRQIATKNFNSGFDSQVYLISTRAGGLGLNI-PGANRVIIFDFQFNPTWEEQAVGR---- 1447 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + G + V+VY +A T ++++ R K+ + +++ Sbjct: 1448 -AYRLGQLKPVYVYRFLAGGTYEDVMHNRAVFKTQLAFRVVD 1488 >gi|224098380|ref|XP_002196003.1| PREDICTED: alpha thalassemia/mental retardation syndrome X-linked [Taeniopygia guttata] Length = 2434 Score = 78.4 bits (192), Expect = 5e-13, Method: Composition-based stats. Identities = 38/201 (18%), Positives = 73/201 (36%), Gaps = 26/201 (12%) Query: 9 RELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKI---KALEVIIEK 65 ++ D E +E + L++A +E V + + +E +E Sbjct: 1947 KDFVTDADAEVLEHSGKMVLLFEILRMA------EELGDKVLVFSQSLISLDLIEDFLEL 2000 Query: 66 ANAAPI----IVAY-----HFNS-DLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAH 115 AN Y F + D RL + ++ K + + L Sbjct: 2001 ANREKSERDQPPIYKGEGKWFRNIDYYRLDGST-TAQSRKKWAEEFNDETNVRGRLFIIS 2059 Query: 116 PASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNT 175 + G+NL N ++ F W+ Q I R+ + G + VFVY +AQ T Sbjct: 2060 TKAGSLGINL-VAANRVIIFDASWNPSYDIQSIFRV-----YRFGQNKPVFVYRFLAQGT 2113 Query: 176 IDELVLQRLRTKSTIQDLLLN 196 +++ + R TK ++ +++ Sbjct: 2114 MEDKIYDRQVTKQSLSFRVVD 2134 >gi|30686915|ref|NP_568365.2| CHR17 (CHROMATIN REMODELING FACTOR17); ATP binding / DNA binding / DNA-dependent ATPase/ helicase/ hydrolase, acting on acid anhydrides, in phosphorus-containing anhydrides / nucleic acid binding / nucleosome binding [Arabidopsis thaliana] gi|332005204|gb|AED92587.1| chromatin remodeling factor17 [Arabidopsis thaliana] Length = 1069 Score = 78.4 bits (192), Expect = 5e-13, Method: Composition-based stats. Identities = 35/220 (15%), Positives = 77/220 (35%), Gaps = 35/220 (15%) Query: 6 KFQRELYCDLQGENIEAFNSASKTVKCLQLA-----------------NGAVYYDEEKHW 48 + Q++ Y L +++E N + + L +A G Y + Sbjct: 432 QMQKQYYKALLQKDLEVVNGGGERKRLLNIAMQLRKCCNHPYLFQGAEPGPPYTTGDHLV 491 Query: 49 KEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARL---------QKAFPQGRTL-DKDP 98 + + K + +++ L L Q G T D+ Sbjct: 492 TNAGKMVLLDKLLPKLKDRDSRVLIFSQMTRLLDILEDYLMYRGYQYCRIDGNTGGDERD 551 Query: 99 CTIQEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 +I+ +N+ + + + G G+NL ++++ + W+ + Q R Sbjct: 552 ASIEAYNKPGSEKFVFLLSTRAGGLGINL-ATADVVILYDSDWNPQVDLQA-----QDRA 605 Query: 157 RQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + G K+ V V+ +N I+ V++R K + L++ Sbjct: 606 HRIGQKKEVQVFRFCTENAIEAKVIERAYKKLALDALVIQ 645 >gi|331229057|ref|XP_003327195.1| DNA repair protein rad16 [Puccinia graminis f. sp. tritici CRL 75-36-700-3] gi|309306185|gb|EFP82776.1| DNA repair protein rad16 [Puccinia graminis f. sp. tritici CRL 75-36-700-3] Length = 968 Score = 78.4 bits (192), Expect = 6e-13, Method: Composition-based stats. Identities = 37/195 (18%), Positives = 68/195 (34%), Gaps = 43/195 (22%) Query: 11 LYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEV----IIEKA 66 + DL + +E N SK Q G + + W+ KI+AL + + Sbjct: 780 ITIDLSQDALEDENMGSKA---RQ---GVLDRLDPGKWR--TSTKIEALVEELSKLNQSD 831 Query: 67 NAAPIIVAYHFNSDLARLQKA-----FPQGR-----TLDKDPCTIQEW-NEGKIPLLFAH 115 + IV F L +++ F R T + TIQ + N + + Sbjct: 832 HTIKSIVFSQFTVFLDLIERRLQLAGFKLARLQGNMTPEARNRTIQYFMNNNDVQVFLVS 891 Query: 116 PASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNT 175 + G LNL + + WW+ Q ++R LI +N+ Sbjct: 892 LKAGGVALNLTEASRVFIM-DPWWNPAVELQAMDR-------------------LIIENS 931 Query: 176 IDELVLQRLRTKSTI 190 I+ +++ + K + Sbjct: 932 IESRIVELQKKKEAM 946 >gi|148689217|gb|EDL21164.1| Rad54 like 2 (S. cerevisiae) [Mus musculus] Length = 1466 Score = 78.4 bits (192), Expect = 6e-13, Method: Composition-based stats. Identities = 32/180 (17%), Positives = 63/180 (35%), Gaps = 39/180 (21%) Query: 52 HDEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQK----------------------- 86 + K+ L +IE++ I+V S LA +++ Sbjct: 718 NSPKMVLLFHLIEESVKLGDKILVFSQSLSTLALIEEFLGKRDMPCLPGAEGQGTQKWVR 777 Query: 87 -----AFPQGRTLDKDPCTIQEWNEGKIP---LLFAHPASCGHGLNLQYGGNILVFFSLW 138 + I ++N+ L + G+NL G N +V F Sbjct: 778 NVSYFRLDGSTPAFERERLINQFNDPSNLTTWLFLLSTRAGCLGVNL-IGANRVVVFDAS 836 Query: 139 WDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNAL 198 W+ Q + R + G K+ +Y L+A T+++ + R +K + D +++ L Sbjct: 837 WNPCHDAQAV-----CRVYRYGQKKPCHIYRLVADYTLEKKIYDRQISKQGMSDRVVDDL 891 >gi|126090612|ref|NP_109655.2| helicase ARIP4 [Mus musculus] Length = 1467 Score = 78.4 bits (192), Expect = 6e-13, Method: Composition-based stats. Identities = 32/180 (17%), Positives = 63/180 (35%), Gaps = 39/180 (21%) Query: 52 HDEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQK----------------------- 86 + K+ L +IE++ I+V S LA +++ Sbjct: 719 NSPKMVLLFHLIEESVKLGDKILVFSQSLSTLALIEEFLGKRDMPCLPGAEGQGTQKWVR 778 Query: 87 -----AFPQGRTLDKDPCTIQEWNEGKIP---LLFAHPASCGHGLNLQYGGNILVFFSLW 138 + I ++N+ L + G+NL G N +V F Sbjct: 779 NVSYFRLDGSTPAFERERLINQFNDPSNLTTWLFLLSTRAGCLGVNL-IGANRVVVFDAS 837 Query: 139 WDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNAL 198 W+ Q + R + G K+ +Y L+A T+++ + R +K + D +++ L Sbjct: 838 WNPCHDAQAV-----CRVYRYGQKKPCHIYRLVADYTLEKKIYDRQISKQGMSDRVVDDL 892 >gi|74137993|dbj|BAE25404.1| unnamed protein product [Mus musculus] Length = 1434 Score = 78.4 bits (192), Expect = 6e-13, Method: Composition-based stats. Identities = 32/180 (17%), Positives = 63/180 (35%), Gaps = 39/180 (21%) Query: 52 HDEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQK----------------------- 86 + K+ L +IE++ I+V S LA +++ Sbjct: 686 NSPKMVLLFHLIEESVKLGDKILVFSQSLSTLALIEEFLGKRDMPCLPGAEGQGTQKWVR 745 Query: 87 -----AFPQGRTLDKDPCTIQEWNEGKIP---LLFAHPASCGHGLNLQYGGNILVFFSLW 138 + I ++N+ L + G+NL G N +V F Sbjct: 746 NVSYFRLDGSTPAFERERLINQFNDPSNLTTWLFLLSTRAGCLGVNL-IGANRVVVFDAS 804 Query: 139 WDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNAL 198 W+ Q + R + G K+ +Y L+A T+++ + R +K + D +++ L Sbjct: 805 WNPCHDAQAV-----CRVYRYGQKKPCHIYRLVADYTLEKKIYDRQISKQGMSDRVVDDL 859 >gi|81916664|sp|Q99NG0|ARIP4_MOUSE RecName: Full=Helicase ARIP4; AltName: Full=Androgen receptor-interacting protein 4; AltName: Full=RAD54-like protein 2; AltName: Full=Steroid receptor-interacting SNF2 domain-containing protein-like gi|12331285|emb|CAC24703.1| steroid receptor-interacting SNF2 domain protein [Mus musculus] gi|126631448|gb|AAI33715.1| RAD54 like 2 (S. cerevisiae) [Mus musculus] Length = 1466 Score = 78.4 bits (192), Expect = 6e-13, Method: Composition-based stats. Identities = 32/180 (17%), Positives = 63/180 (35%), Gaps = 39/180 (21%) Query: 52 HDEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQK----------------------- 86 + K+ L +IE++ I+V S LA +++ Sbjct: 718 NSPKMVLLFHLIEESVKLGDKILVFSQSLSTLALIEEFLGKRDMPCLPGAEGQGTQKWVR 777 Query: 87 -----AFPQGRTLDKDPCTIQEWNEGKIP---LLFAHPASCGHGLNLQYGGNILVFFSLW 138 + I ++N+ L + G+NL G N +V F Sbjct: 778 NVSYFRLDGSTPAFERERLINQFNDPSNLTTWLFLLSTRAGCLGVNL-IGANRVVVFDAS 836 Query: 139 WDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNAL 198 W+ Q + R + G K+ +Y L+A T+++ + R +K + D +++ L Sbjct: 837 WNPCHDAQAV-----CRVYRYGQKKPCHIYRLVADYTLEKKIYDRQISKQGMSDRVVDDL 891 >gi|297243714|ref|ZP_06927645.1| superfamily II DNA/RNA helicase, SNF2 family [Gardnerella vaginalis AMD] gi|296888465|gb|EFH27206.1| superfamily II DNA/RNA helicase, SNF2 family [Gardnerella vaginalis AMD] Length = 735 Score = 78.4 bits (192), Expect = 6e-13, Method: Composition-based stats. Identities = 39/199 (19%), Positives = 75/199 (37%), Gaps = 18/199 (9%) Query: 7 FQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKA 66 + + +C L E + A + + + D+ ++ K+ V + Sbjct: 493 IENKSWCQLNAEEESEYEKALMSGNFHAIRRVSWNVDDMRNS---SKAKLLKEIVEEAEL 549 Query: 67 NAAPIIVAYHFNSDLARLQKAFP--------QGRTLDKDPCTIQEW-NEGKIPLLFAHPA 117 +++ + L ++ AF + +K I+E+ N +L + Sbjct: 550 EERKVLIFSFYLDTLHKVVDAFSNKCIGLINGSVSPEKRIKIIEEFDNAPAGSVLVSQIM 609 Query: 118 SCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 S G GLN+Q +++V Q I R + G R V VY+L+A+ TID Sbjct: 610 SGGTGLNIQ-SASVVVICEPQLKPSTENQAISR-----AYRMGQSRDVIVYHLLAEKTID 663 Query: 178 ELVLQRLRTKSTIQDLLLN 196 E + + L K I + + Sbjct: 664 EGITKVLENKQEIFNRFAD 682 >gi|251797976|ref|YP_003012707.1| SNF2-related protein [Paenibacillus sp. JDR-2] gi|247545602|gb|ACT02621.1| SNF2-related protein [Paenibacillus sp. JDR-2] Length = 589 Score = 78.4 bits (192), Expect = 6e-13, Method: Composition-based stats. Identities = 32/153 (20%), Positives = 68/153 (44%), Gaps = 17/153 (11%) Query: 52 HDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAF--------PQGRTLDKDPCT-IQ 102 + K + + +I++ N +I+ + + L + F P +++ + Sbjct: 366 ANTKAEKVMELIQQINDK-VIIFTEYRASQEYLLQFFRSHNILAVPYRGGMNRGKKDWMM 424 Query: 103 EWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFK 162 + G+ +L A + G G+NLQ+ + ++ F L W+ +Q I R+ + G K Sbjct: 425 DLFRGRAQVLIA-TEAGGEGINLQF-CHNMINFDLPWNPMRVEQRIGRV-----HRLGQK 477 Query: 163 RAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 V +Y L TI+E ++ L K + +L++ Sbjct: 478 EDVKIYNLCTLGTIEEHIVNLLHEKINLFELVI 510 >gi|238499905|ref|XP_002381187.1| DNA excision repair protein (Rad5), putative [Aspergillus flavus NRRL3357] gi|220692940|gb|EED49286.1| DNA excision repair protein (Rad5), putative [Aspergillus flavus NRRL3357] Length = 1246 Score = 78.4 bits (192), Expect = 6e-13, Method: Composition-based stats. Identities = 21/84 (25%), Positives = 35/84 (41%), Gaps = 6/84 (7%) Query: 111 LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYL 170 +L + G GLNL N+ + WW Q I+R+ + G R V V Sbjct: 1145 VLLISLRAGGVGLNLTAASNVFMM-DPWWSFAIEAQAIDRV-----HRMGQLRDVAVTRF 1198 Query: 171 IAQNTIDELVLQRLRTKSTIQDLL 194 + +++I+ +L+ K I L Sbjct: 1199 VVKDSIEARMLRVQERKMNIAGSL 1222 >gi|169779277|ref|XP_001824103.1| DNA repair protein RAD5 [Aspergillus oryzae RIB40] gi|83772842|dbj|BAE62970.1| unnamed protein product [Aspergillus oryzae] Length = 1246 Score = 78.4 bits (192), Expect = 6e-13, Method: Composition-based stats. Identities = 21/84 (25%), Positives = 35/84 (41%), Gaps = 6/84 (7%) Query: 111 LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYL 170 +L + G GLNL N+ + WW Q I+R+ + G R V V Sbjct: 1145 VLLISLRAGGVGLNLTAASNVFMM-DPWWSFAIEAQAIDRV-----HRMGQLRDVAVTRF 1198 Query: 171 IAQNTIDELVLQRLRTKSTIQDLL 194 + +++I+ +L+ K I L Sbjct: 1199 VVKDSIEARMLRVQERKMNIAGSL 1222 >gi|313895499|ref|ZP_07829055.1| conserved domain protein [Selenomonas sp. oral taxon 137 str. F0430] gi|312975625|gb|EFR41084.1| conserved domain protein [Selenomonas sp. oral taxon 137 str. F0430] Length = 91 Score = 78.4 bits (192), Expect = 6e-13, Method: Composition-based stats. Identities = 24/90 (26%), Positives = 42/90 (46%), Gaps = 6/90 (6%) Query: 111 LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYL 170 + A+ G G+ L +VFFS+ + + +Q RI + K Y+ Sbjct: 1 MFVGQIAAAGLGITLIAAA-TMVFFSMDYSMSNFEQAKARI-----HRVSQKENCHYIYI 54 Query: 171 IAQNTIDELVLQRLRTKSTIQDLLLNALKK 200 +A T+D VL+ LR K+ + LL++ +K Sbjct: 55 VAAGTVDRKVLKALRDKADLAKLLVDDYRK 84 >gi|330906673|ref|XP_003295556.1| hypothetical protein PTT_01652 [Pyrenophora teres f. teres 0-1] gi|311333059|gb|EFQ96347.1| hypothetical protein PTT_01652 [Pyrenophora teres f. teres 0-1] Length = 1167 Score = 78.4 bits (192), Expect = 6e-13, Method: Composition-based stats. Identities = 38/203 (18%), Positives = 79/203 (38%), Gaps = 21/203 (10%) Query: 7 FQRELYCDLQGENIEAFNSASKTVKCLQLAN--GAVYYDEEKHWKEVHDEKIKALEVIIE 64 + E + + + I + +C QLA+ A+ E K + + K+ L +++ Sbjct: 902 LKEETFAESNPDIIYEELELYQDYQCHQLASKYHALKKFELKDHEWMDSGKVAKLLALLK 961 Query: 65 K--ANAAPIIVAYHFNS---------DLARLQKAFPQGRTLDKDPCTIQE--WNEGKIPL 111 K N +V F S D + G T ++ ++ + + + I L Sbjct: 962 KYKENGDRALVFSQFTSVMDILGWVFDDHDINFMRMDGSTPIQERQSLMDVFYQDESIQL 1021 Query: 112 LFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLI 171 S G G+NL N ++ F ++ ++ Q R + G R V V L+ Sbjct: 1022 FMISTKSGGAGINL-ACANKVIIFDSSFNPQDDIQA-----ENRAHRVGQTREVEVVRLV 1075 Query: 172 AQNTIDELVLQRLRTKSTIQDLL 194 ++T++E + +K + ++ Sbjct: 1076 TKDTVEEQIYALGVSKLELDKMV 1098 >gi|85000227|ref|XP_954832.1| global transcription activator, SNF2 family member [Theileria annulata strain Ankara] gi|65302978|emb|CAI75356.1| global transcription activator, SNF2 family member, putative [Theileria annulata] Length = 1162 Score = 78.4 bits (192), Expect = 6e-13, Method: Composition-based stats. Identities = 29/174 (16%), Positives = 64/174 (36%), Gaps = 25/174 (14%) Query: 28 KTVKCLQLANG-AVYYDEE----KHWKEVHDEKIKALEVIIEKAN--AAPIIVAYHFNSD 80 K ++ ++ N +Y + K+ L++I+ + +++ S Sbjct: 646 KFLQLRKICNHPFLYVNNNFIPCNDLIINSSGKMCILDMILSRLYYVNHRVLIFSQMTSL 705 Query: 81 LARLQ-----KAFPQGRT-----LDKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYG 128 L L+ +++ R +K I +NE + + G+NLQ Sbjct: 706 LDILEVYLNYRSYKYLRLDGNLSSEKRLERINLFNEPDSQYFVFILSTKAGSLGINLQ-S 764 Query: 129 GNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQ 182 + ++ + W+ + Q R+ + G K V LI NTI++ + + Sbjct: 765 ADTVIIYDSDWNPQNDLQAQSRV-----HRIGQKNQVITLRLITPNTIEDNIYR 813 >gi|327356947|gb|EGE85804.1| DNA repair protein rad5 [Ajellomyces dermatitidis ATCC 18188] Length = 1199 Score = 78.4 bits (192), Expect = 6e-13, Method: Composition-based stats. Identities = 33/183 (18%), Positives = 55/183 (30%), Gaps = 46/183 (25%) Query: 52 HDEKIKALEVIIEKAN-AAPIIVAYHFNSDLARL-----QKAFPQGRTLDK-----DPCT 100 KI AL + + +V F S L + + P R Sbjct: 997 TSAKIHALISQLTRLPPNTKSVVFSQFTSFLDLIGPQLTRAGIPHLRFDGTMAQRARAAV 1056 Query: 101 IQEWNEGKIP-----------------------------LLFAHPASCGHGLNLQYGGNI 131 + +++ IP +L + G GLNL N Sbjct: 1057 LAKFSSVGIPDEEDGEDEGNKRQSNLSLSRSHVREPTPNVLLISLRAGGVGLNLTT-ANQ 1115 Query: 132 LVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQ 191 + WW Q I+R+ + G + V V I +++I+ +L+ K I Sbjct: 1116 VFMMDPWWSFATEAQAIDRV-----HRMGQLKDVSVTRFIVKDSIEGRMLRIQERKMMIA 1170 Query: 192 DLL 194 L Sbjct: 1171 GSL 1173 >gi|239613018|gb|EEQ90005.1| DNA repair protein rad5 [Ajellomyces dermatitidis ER-3] Length = 1194 Score = 78.4 bits (192), Expect = 6e-13, Method: Composition-based stats. Identities = 33/183 (18%), Positives = 55/183 (30%), Gaps = 46/183 (25%) Query: 52 HDEKIKALEVIIEKAN-AAPIIVAYHFNSDLARL-----QKAFPQGRTLDK-----DPCT 100 KI AL + + +V F S L + + P R Sbjct: 992 TSAKIHALISQLTRLPPNTKSVVFSQFTSFLDLIGPQLTRAGIPHLRFDGTMAQRARAAV 1051 Query: 101 IQEWNEGKIP-----------------------------LLFAHPASCGHGLNLQYGGNI 131 + +++ IP +L + G GLNL N Sbjct: 1052 LAKFSSVGIPDEEDGEDEGNKRQSNLSLSRSHVREPTPNVLLISLRAGGVGLNLTT-ANQ 1110 Query: 132 LVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQ 191 + WW Q I+R+ + G + V V I +++I+ +L+ K I Sbjct: 1111 VFMMDPWWSFATEAQAIDRV-----HRMGQLKDVSVTRFIVKDSIEGRMLRIQERKMMIA 1165 Query: 192 DLL 194 L Sbjct: 1166 GSL 1168 >gi|261189609|ref|XP_002621215.1| DNA repair protein rad5 [Ajellomyces dermatitidis SLH14081] gi|239591451|gb|EEQ74032.1| DNA repair protein rad5 [Ajellomyces dermatitidis SLH14081] Length = 1194 Score = 78.4 bits (192), Expect = 6e-13, Method: Composition-based stats. Identities = 33/183 (18%), Positives = 55/183 (30%), Gaps = 46/183 (25%) Query: 52 HDEKIKALEVIIEKAN-AAPIIVAYHFNSDLARL-----QKAFPQGRTLDK-----DPCT 100 KI AL + + +V F S L + + P R Sbjct: 992 TSAKIHALISQLTRLPPNTKSVVFSQFTSFLDLIGPQLTRAGIPHLRFDGTMAQRARAAV 1051 Query: 101 IQEWNEGKIP-----------------------------LLFAHPASCGHGLNLQYGGNI 131 + +++ IP +L + G GLNL N Sbjct: 1052 LAKFSSVGIPDEEDGEDEGNKRQSNLSLSRSHVREPTPNVLLISLRAGGVGLNLTT-ANQ 1110 Query: 132 LVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQ 191 + WW Q I+R+ + G + V V I +++I+ +L+ K I Sbjct: 1111 VFMMDPWWSFATEAQAIDRV-----HRMGQLKDVSVTRFIVKDSIEGRMLRIQERKMMIA 1165 Query: 192 DLL 194 L Sbjct: 1166 GSL 1168 >gi|189535029|ref|XP_687332.3| PREDICTED: helicase ARIP4 [Danio rerio] Length = 1437 Score = 78.1 bits (191), Expect = 6e-13, Method: Composition-based stats. Identities = 28/159 (17%), Positives = 60/159 (37%), Gaps = 12/159 (7%) Query: 46 KHWKEVHDEKIKALEVIIEKANAAPIIVAYHF-NSDLAR-LQKAFPQGRT-LDKDPCTIQ 102 V + + L VI + + P+ + + R + G T + I Sbjct: 737 GDKILVFSQSLSTLTVIEDFLSRRPMPIQTETGTHNWVRNINYYRLDGSTSASERERLIN 796 Query: 103 EWNEGKIP---LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQA 159 ++N+ + + G+NL G N +V F W+ Q + R + Sbjct: 797 QFNDPANTQAWVFLLSTRAGCLGVNL-IGANRVVVFDASWNPCHDAQAV-----CRVYRY 850 Query: 160 GFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNAL 198 G ++ +Y L+ T+++ + R +K + D +++ L Sbjct: 851 GQRKPCHIYRLVCDFTLEKKIYDRQVSKQGMSDRVVDDL 889 >gi|94732329|emb|CAK11033.1| novel protein similar to human and mouse steroid receptor-interacting SNF2 domain protein (Srisnf2l) [Danio rerio] Length = 1305 Score = 78.1 bits (191), Expect = 6e-13, Method: Composition-based stats. Identities = 28/159 (17%), Positives = 60/159 (37%), Gaps = 12/159 (7%) Query: 46 KHWKEVHDEKIKALEVIIEKANAAPIIVAYHF-NSDLAR-LQKAFPQGRT-LDKDPCTIQ 102 V + + L VI + + P+ + + R + G T + I Sbjct: 605 GDKILVFSQSLSTLTVIEDFLSRRPMPIQTETGTHNWVRNINYYRLDGSTSASERERLIN 664 Query: 103 EWNEGKIP---LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQA 159 ++N+ + + G+NL G N +V F W+ Q + R + Sbjct: 665 QFNDPANTQAWVFLLSTRAGCLGVNL-IGANRVVVFDASWNPCHDAQAV-----CRVYRY 718 Query: 160 GFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNAL 198 G ++ +Y L+ T+++ + R +K + D +++ L Sbjct: 719 GQRKPCHIYRLVCDFTLEKKIYDRQVSKQGMSDRVVDDL 757 >gi|71277007|gb|AAZ29723.1| ATRY [Macropus eugenii] Length = 1771 Score = 78.1 bits (191), Expect = 6e-13, Method: Composition-based stats. Identities = 34/192 (17%), Positives = 64/192 (33%), Gaps = 44/192 (22%) Query: 42 YDEEKHWKEVHDEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQKAFPQGRTLDKDPC 99 D + E H K+ L I++ A ++V L ++ G D Sbjct: 1306 TDSDAKVLE-HSGKMVLLFEILKMAEELGDKVLVFSQSLISLDLIEDFLELGSNEISDDK 1364 Query: 100 TI--------------------------------QEWNEGKI---PLLFAHPASCGHGLN 124 +E+N+ L + G+N Sbjct: 1365 DKPRIYKGEGKWFRNIDYYRLDGSSSAQSRKKWAEEFNDETNVRGRLFLISTKAGSLGIN 1424 Query: 125 LQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRL 184 L N ++ F W+ Q I R+ + G + VFVY +AQ T+++ + +R Sbjct: 1425 L-VAANRVIVFDASWNPSYDIQSIFRV-----YRFGQSKPVFVYRFLAQGTMEDKIYERQ 1478 Query: 185 RTKSTIQDLLLN 196 TK ++ +++ Sbjct: 1479 VTKQSLSFRVID 1490 >gi|320591376|gb|EFX03815.1| snf2 family helicase [Grosmannia clavigera kw1407] Length = 978 Score = 78.1 bits (191), Expect = 6e-13, Method: Composition-based stats. Identities = 26/144 (18%), Positives = 48/144 (33%), Gaps = 17/144 (11%) Query: 64 EKANAAPIIVAYHFNSDLARLQKAFP---------QGRTLD--KDPCTIQEWNEGKIPLL 112 + N IV F S L L GR + ++ + +L Sbjct: 750 DSENEHKFIVFSQFTSMLDLLGPFLERAGLGHVQYDGRMRNDAREASLRSLREDAATRVL 809 Query: 113 FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIA 172 GLNL +++ +W+ +Q I+R+ + V VY L Sbjct: 810 LCSLKCGALGLNLTAATRVVIL-EPFWNPFVEEQAIDRV-----HRLTQTVDVTVYKLTI 863 Query: 173 QNTIDELVLQRLRTKSTIQDLLLN 196 +T+++ +L+ K + L Sbjct: 864 ADTVEQRILELQAKKRLLAAHALE 887 >gi|297812047|ref|XP_002873907.1| hypothetical protein ARALYDRAFT_488746 [Arabidopsis lyrata subsp. lyrata] gi|297319744|gb|EFH50166.1| hypothetical protein ARALYDRAFT_488746 [Arabidopsis lyrata subsp. lyrata] Length = 1074 Score = 78.1 bits (191), Expect = 6e-13, Method: Composition-based stats. Identities = 35/220 (15%), Positives = 77/220 (35%), Gaps = 35/220 (15%) Query: 6 KFQRELYCDLQGENIEAFNSASKTVKCLQLA-----------------NGAVYYDEEKHW 48 + Q++ Y L +++E N + + L +A G Y + Sbjct: 432 QMQKQYYKALLQKDLEVVNGGGERKRLLNIAMQLRKCCNHPYLFQGAEPGPPYTTGDHLV 491 Query: 49 KEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARL---------QKAFPQGRTL-DKDP 98 + + K + +++ L L Q G T D+ Sbjct: 492 TNAGKMVLLDKLLPKLKDRDSRVLIFSQMTRLLDILEDYLMYRGYQYCRIDGNTGGDERD 551 Query: 99 CTIQEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 +I+ +N+ + + + G G+NL ++++ + W+ + Q R Sbjct: 552 ASIEAYNKPGSEKFVFLLSTRAGGLGINL-ATADVVILYDSDWNPQVDLQA-----QDRA 605 Query: 157 RQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + G K+ V V+ +N I+ V++R K + L++ Sbjct: 606 HRIGQKKEVQVFRFCTENAIEAKVIERAYKKLALDALVIQ 645 >gi|224065816|ref|XP_002190293.1| PREDICTED: similar to hCG1997495 [Taeniopygia guttata] Length = 1473 Score = 78.1 bits (191), Expect = 6e-13, Method: Composition-based stats. Identities = 31/179 (17%), Positives = 68/179 (37%), Gaps = 38/179 (21%) Query: 52 HDEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQKAFPQ----------------GRT 93 + K+ L +IE++ I+V S L+ +++ + R Sbjct: 729 NSPKMVLLFHLIEESVKLGDKILVFSQSLSTLSVIEEFLAKRLMPSPPGSDGGVHNWVRN 788 Query: 94 LD-----------KDPCTIQEWNEGK---IPLLFAHPASCGHGLNLQYGGNILVFFSLWW 139 ++ + I ++N+ + L + G+NL G N +V F W Sbjct: 789 INYYRLDGSTSASERERLINQFNDPSNASVWLFLLSTRAGCLGVNL-IGANRVVVFDASW 847 Query: 140 DLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNAL 198 + Q + R + G K+ +Y L++ T+++ + R +K + D +++ L Sbjct: 848 NPCHDAQAV-----CRVYRYGQKKPCHIYRLVSDYTLEKKIYDRQISKQGMSDRVVDDL 901 >gi|242046444|ref|XP_002461093.1| hypothetical protein SORBIDRAFT_02g040560 [Sorghum bicolor] gi|241924470|gb|EER97614.1| hypothetical protein SORBIDRAFT_02g040560 [Sorghum bicolor] Length = 756 Score = 78.1 bits (191), Expect = 7e-13, Method: Composition-based stats. Identities = 30/172 (17%), Positives = 61/172 (35%), Gaps = 22/172 (12%) Query: 40 VYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRT------ 93 +Y D + L +IE ++ H + +++ + + Sbjct: 505 IYTDS---AVAKIPAVLDFLGTMIEA--GCKFLIFAHHQPMIDAIEQHLSKKKVKCIKID 559 Query: 94 ----LDKDPCTIQEWNE-GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMI 148 L + + E I + G+G+ L + ++F L W + Q Sbjct: 560 GKTPLTTRQTLVTSFQENDDIKAAVLSIKAGGYGITLT-AASTVIFAELSWTPGDIIQAE 618 Query: 149 ERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKK 200 +R + G +V VYYL+A T D+L+ ++ K +L+ +K Sbjct: 619 DR-----AHRIGQVSSVNVYYLLANGTADDLMWDSVQGKLENLGQMLDGQEK 665 >gi|240274020|gb|EER37538.1| SNF2 family helicase/ATPase [Ajellomyces capsulatus H143] Length = 1762 Score = 78.1 bits (191), Expect = 7e-13, Method: Composition-based stats. Identities = 28/162 (17%), Positives = 62/162 (38%), Gaps = 19/162 (11%) Query: 48 WKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGR----------TLD 95 W + + + IIE+ A +++ H L L+ Q + + Sbjct: 1306 WSLELSHRAQVADQIIERSIAAGDKVLLFSHSIPTLNYLELVLKQAKRSYSRLDGKTPIA 1365 Query: 96 KDPCTIQEWNEG-KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 + +N G + + G GLN+ G N ++ F ++ +Q + R Sbjct: 1366 TRQIATKNFNSGFDSQVYLISTRAGGLGLNI-PGANRVIIFDFQFNPTWEEQAVGR---- 1420 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + G + V+VY +A T ++++ R K+ + +++ Sbjct: 1421 -AYRLGQLKPVYVYRFLAGGTYEDVMHNRAVFKTQLAFRVVD 1461 >gi|221118789|ref|XP_002158846.1| PREDICTED: similar to RAD54-like 2, partial [Hydra magnipapillata] Length = 743 Score = 78.1 bits (191), Expect = 7e-13, Method: Composition-based stats. Identities = 28/171 (16%), Positives = 58/171 (33%), Gaps = 37/171 (21%) Query: 52 HDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARL-----------------QKAFPQGR 92 + K L II++ A +++ L + + + +GR Sbjct: 579 NSGKFLVLNKIIQESMARGDKMLIFSQSLLTLNSIEEFLQNIPIKNGSDHEKKYCWKKGR 638 Query: 93 TLDK---------DPCTIQEWNEGKIP---LLFAHPASCGHGLNLQYGGNILVFFSLWWD 140 + I+ +N + + G+NL N +V F + W+ Sbjct: 639 DYFRLDGSTSTLEREKLIRLFNSKDNKHTNIFLLSTRAGCLGINL-IAANRVVVFDVSWN 697 Query: 141 LEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQ 191 Q + R + G ++ +Y L+A NT+++ + R +K I Sbjct: 698 PCHDAQAV-----CRVYRYGQEKPCHIYRLVASNTMEKKIYYRQISKQGIS 743 >gi|330930186|ref|XP_003302929.1| hypothetical protein PTT_14926 [Pyrenophora teres f. teres 0-1] gi|311321396|gb|EFQ88965.1| hypothetical protein PTT_14926 [Pyrenophora teres f. teres 0-1] Length = 1159 Score = 78.1 bits (191), Expect = 7e-13, Method: Composition-based stats. Identities = 34/162 (20%), Positives = 61/162 (37%), Gaps = 21/162 (12%) Query: 50 EVHDEKIKALEVII----EKANAAPIIVAYHFNSDLARLQKAFPQGR----------TLD 95 + K A++ I ++ IIV F + + L++ F + +L Sbjct: 989 VLPSAKTIAVKSQILNWRKEKGDVKIIVYTQFLAMIRILKRVFAKEGWRCEEYHGKMSLK 1048 Query: 96 KDPCTIQEWNEGKIP-LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 K I + + P +L A G GLNL + ++ WW+ QQ Sbjct: 1049 KRDDAIAAFADTAGPAILLASLRCGGLGLNLTM-ASKVIMIDPWWNSASEQQA-----FC 1102 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 R + G F+ L NT+DE +++ K D+++ Sbjct: 1103 RVFRIGQNEKTFMSRLCVTNTVDEQLVRMQERKQEEIDVVME 1144 >gi|307106103|gb|EFN54350.1| hypothetical protein CHLNCDRAFT_135608 [Chlorella variabilis] Length = 877 Score = 78.1 bits (191), Expect = 7e-13, Method: Composition-based stats. Identities = 27/145 (18%), Positives = 51/145 (35%), Gaps = 28/145 (19%) Query: 72 IVAYHFNSDLARLQKA-----FPQGRT-----LDKDPCTIQEWNEGKIP---LLFAHPAS 118 +V F S L ++ A F GR + ++ + +L + Sbjct: 734 VVFSQFTSYLDLVEAALAGEGFVTGRLDGKTSAKRRGEVLRAFQSSSASSPTVLLVSLKA 793 Query: 119 CGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDE 178 G GLNL + + WW+ +Q ++R+ + G R ++I+E Sbjct: 794 GGVGLNLT-AASRVHLLDPWWNPSVEEQAMDRV-----HRLGQTR---------ADSIEE 838 Query: 179 LVLQRLRTKSTIQDLLLNALKKETI 203 +L K + + + K E I Sbjct: 839 RMLALQEQKRDLMRVAFDRRKAEDI 863 >gi|297469909|ref|XP_002707323.1| PREDICTED: transcriptional regulator ATRX [Bos taurus] gi|297492973|ref|XP_002700028.1| PREDICTED: alpha thalassemia/mental retardation syndrome X-linked (RAD54 homolog, S. cerevisiae) isoform 1 [Bos taurus] gi|296470861|gb|DAA12976.1| ATP-dependent helicase ATRX isoform 1 [Bos taurus] Length = 2479 Score = 78.1 bits (191), Expect = 7e-13, Method: Composition-based stats. Identities = 34/202 (16%), Positives = 73/202 (36%), Gaps = 27/202 (13%) Query: 9 RELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIE---- 64 ++ D E +E + L++A ++ + +E +E Sbjct: 1990 KDFVTDADAEVLEHSGKMVLLFEILRMAEE---IGDKVLVFSQSLISLDLIEDFLELASR 2046 Query: 65 ---KANAAPIIVAYHFNSD---LARLQKAFPQGRTLDKDPCT-IQEWNEGKI---PLLFA 114 + P+I + + L + G T + +E+N+ L Sbjct: 2047 EKTEDKDKPLI----YKGEGKWLRNIDYYRLDGSTTAQSRKKWAEEFNDETNVRGRLFII 2102 Query: 115 HPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQN 174 + G+NL N ++ F W+ Q I R+ + G + V+VY +AQ Sbjct: 2103 STKAGSLGINL-VAANRVIIFDASWNPSYDIQSIFRV-----YRFGQTKPVYVYRFLAQG 2156 Query: 175 TIDELVLQRLRTKSTIQDLLLN 196 T+++ + R TK ++ +++ Sbjct: 2157 TMEDKIYDRQVTKQSLSFRVVD 2178 >gi|325095597|gb|EGC48907.1| SNF2 family helicase/ATPase [Ajellomyces capsulatus H88] Length = 1787 Score = 78.1 bits (191), Expect = 7e-13, Method: Composition-based stats. Identities = 28/162 (17%), Positives = 62/162 (38%), Gaps = 19/162 (11%) Query: 48 WKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGR----------TLD 95 W + + + IIE+ A +++ H L L+ Q + + Sbjct: 1333 WSLELSHRAQVADQIIERSIAAGDKVLLFSHSIPTLNYLELVLKQAKRSYSRLDGKTPIA 1392 Query: 96 KDPCTIQEWNEG-KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 + +N G + + G GLN+ G N ++ F ++ +Q + R Sbjct: 1393 TRQIATKNFNSGFDSQVYLISTRAGGLGLNI-PGANRVIIFDFQFNPTWEEQAVGR---- 1447 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + G + V+VY +A T ++++ R K+ + +++ Sbjct: 1448 -AYRLGQLKPVYVYRFLAGGTYEDVMHNRAVFKTQLAFRVVD 1488 >gi|126342606|ref|XP_001372327.1| PREDICTED: similar to alpha thalassaemia mental retardation X-linked protein [Monodelphis domestica] Length = 2447 Score = 78.1 bits (191), Expect = 7e-13, Method: Composition-based stats. Identities = 34/201 (16%), Positives = 68/201 (33%), Gaps = 25/201 (12%) Query: 9 RELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKI---KALEVIIE- 64 ++ D E +E + L++A +E V + + +E +E Sbjct: 1976 KDFVTDADAEVLEHSGKMVLLFEILRMA------EELGDKVLVFSQSLISLDLIEDFLEL 2029 Query: 65 ------KANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKI---PLLFAH 115 P+I T +E+N+ L Sbjct: 2030 ASREKSDDKDKPLIYKGEGKWFRNIDYYRLDGSTTAQSRKKWAEEFNDETNVRGRLFIIS 2089 Query: 116 PASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNT 175 + G+NL N ++ F W+ Q I R+ + G + V+VY +AQ T Sbjct: 2090 TKAGSLGINL-VAANRVIIFDASWNPSYDIQSIFRV-----YRFGQNKPVYVYRFLAQGT 2143 Query: 176 IDELVLQRLRTKSTIQDLLLN 196 +++ + R TK ++ +++ Sbjct: 2144 MEDKIYDRQVTKQSLSFRVVD 2164 >gi|46137913|ref|XP_390647.1| hypothetical protein FG10471.1 [Gibberella zeae PH-1] Length = 1033 Score = 78.1 bits (191), Expect = 7e-13, Method: Composition-based stats. Identities = 37/171 (21%), Positives = 65/171 (38%), Gaps = 24/171 (14%) Query: 39 AVYYDEEKHW--KEVHDEKIKAL-EVIIEKANAAPIIVAYHFNSDLARLQKAFPQG---- 91 A D+ +H+ E H KI+AL E + + I+ + L + + + Sbjct: 860 ATTKDDHEHYFNAEGHSTKIRALVEDVRKDLWTTKSIIFSCWTRTLHLIARHLEKAGIPY 919 Query: 92 ------RTLDKDPCTIQEWNEG-KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEH 144 L + T+ ++ G + P+L + GLNL N + L W+ Sbjct: 920 LQLDGNSPLPQRQQTLNKFENGTETPVLIMTTGTGAFGLNLT-SANRIFIAELQWNPSVE 978 Query: 145 QQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDE----LVLQRLRTKSTIQ 191 Q I R + G K+ V V I ++T++E + Q+ K I Sbjct: 979 SQAISR-----AIRLGQKKEVRVTRYITKDTVEEVNRQDIKQQQEYKKQIA 1024 >gi|71991518|ref|NP_510607.2| human CSB (Cockayne Syndrome B) homolog family member (csb-1) [Caenorhabditis elegans] gi|30145715|emb|CAB03135.2| C. elegans protein F53H4.1, partially confirmed by transcript evidence [Caenorhabditis elegans] Length = 957 Score = 78.1 bits (191), Expect = 7e-13, Method: Composition-based stats. Identities = 24/100 (24%), Positives = 42/100 (42%), Gaps = 7/100 (7%) Query: 97 DPCTIQEWNEG-KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTR 155 P I+++ + I + + G GLNL N ++ F W+ + Q RI Sbjct: 577 RPKIIKKFEDDVSIKVFLMTTRAGGLGLNLTC-ANKVIIFDPDWNPQADNQAKNRI---- 631 Query: 156 QRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 + G V +Y L++ TI++L + K + LL Sbjct: 632 -YRMGQTNDVAIYRLVSNGTIEDLKFFKQVQKENLAARLL 670 >gi|297469911|ref|XP_592333.4| PREDICTED: transcriptional regulator ATRX isoform 2 [Bos taurus] gi|297492975|ref|XP_002700029.1| PREDICTED: alpha thalassemia/mental retardation syndrome X-linked (RAD54 homolog, S. cerevisiae) isoform 2 [Bos taurus] gi|296470862|gb|DAA12977.1| ATP-dependent helicase ATRX isoform 2 [Bos taurus] Length = 2441 Score = 78.1 bits (191), Expect = 7e-13, Method: Composition-based stats. Identities = 34/202 (16%), Positives = 73/202 (36%), Gaps = 27/202 (13%) Query: 9 RELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIE---- 64 ++ D E +E + L++A ++ + +E +E Sbjct: 1952 KDFVTDADAEVLEHSGKMVLLFEILRMAEE---IGDKVLVFSQSLISLDLIEDFLELASR 2008 Query: 65 ---KANAAPIIVAYHFNSD---LARLQKAFPQGRTLDKDPCT-IQEWNEGKI---PLLFA 114 + P+I + + L + G T + +E+N+ L Sbjct: 2009 EKTEDKDKPLI----YKGEGKWLRNIDYYRLDGSTTAQSRKKWAEEFNDETNVRGRLFII 2064 Query: 115 HPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQN 174 + G+NL N ++ F W+ Q I R+ + G + V+VY +AQ Sbjct: 2065 STKAGSLGINL-VAANRVIIFDASWNPSYDIQSIFRV-----YRFGQTKPVYVYRFLAQG 2118 Query: 175 TIDELVLQRLRTKSTIQDLLLN 196 T+++ + R TK ++ +++ Sbjct: 2119 TMEDKIYDRQVTKQSLSFRVVD 2140 >gi|261327295|emb|CBH10271.1| SNF2 DNA repair protein, putative [Trypanosoma brucei gambiense DAL972] Length = 1497 Score = 78.1 bits (191), Expect = 7e-13, Method: Composition-based stats. Identities = 27/149 (18%), Positives = 57/149 (38%), Gaps = 17/149 (11%) Query: 59 LEVIIEKANAAPIIVAYHFNSDLARLQKAFPQ----------GRTLDKDPCTIQEWN-EG 107 L I + +++ + S L L Q G + + I ++ + Sbjct: 520 LLRYISEDLREKVVLFSTYKSHLYLLMFLLRQRGVVSEVLHGGVEVKERQLIIDRFSVDP 579 Query: 108 KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFV 167 + +L + G G+NL N + F + W+ + Q R+ + G +R V + Sbjct: 580 SLRVLLCSTKALGVGINL-VAANHCILFDVSWNPSDDTQATYRL-----YRYGQRRPVTI 633 Query: 168 YYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 Y + + T + +V +KS I +++ Sbjct: 634 YRIATEGTFEHVVFFYALSKSWIHKKIVD 662 >gi|72387419|ref|XP_844134.1| SNF2 DNA repair protein [Trypanosoma brucei TREU927] gi|62360642|gb|AAX81053.1| SNF2 DNA repair protein, putative [Trypanosoma brucei] gi|70800666|gb|AAZ10575.1| SNF2 DNA repair protein, putative [Trypanosoma brucei brucei strain 927/4 GUTat10.1] Length = 1497 Score = 78.1 bits (191), Expect = 7e-13, Method: Composition-based stats. Identities = 27/149 (18%), Positives = 57/149 (38%), Gaps = 17/149 (11%) Query: 59 LEVIIEKANAAPIIVAYHFNSDLARLQKAFPQ----------GRTLDKDPCTIQEWN-EG 107 L I + +++ + S L L Q G + + I ++ + Sbjct: 520 LLRYISEDLREKVVLFSTYKSHLYLLMFLLRQRGVVSEVLHGGVEVKERQLIIDRFSVDP 579 Query: 108 KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFV 167 + +L + G G+NL N + F + W+ + Q R+ + G +R V + Sbjct: 580 SLRVLLCSTKALGVGINL-VAANHCILFDVSWNPSDDTQATYRL-----YRYGQRRPVTI 633 Query: 168 YYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 Y + + T + +V +KS I +++ Sbjct: 634 YRIATEGTFEHVVFFYALSKSWIHKKIVD 662 >gi|85105641|ref|XP_962010.1| hypothetical protein NCU05246 [Neurospora crassa OR74A] gi|28923601|gb|EAA32774.1| conserved hypothetical protein [Neurospora crassa OR74A] gi|118496048|dbj|BAF37540.1| DNA repair and recombination protein RAD5C [Neurospora crassa] Length = 1111 Score = 78.1 bits (191), Expect = 7e-13, Method: Composition-based stats. Identities = 23/137 (16%), Positives = 50/137 (36%), Gaps = 17/137 (12%) Query: 72 IVAYHFNSDLARLQKAFPQGR----------TLDKDPCTIQEW-NEGKIPLLFAHPASCG 120 +V + S L ++ A T + ++ + + ++ + G Sbjct: 956 VVFSGWTSHLDLIELALEDAGITFTRLDGKMTRTARTAAMDKFREDPSVQVILVSIMAGG 1015 Query: 121 HGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELV 180 GLNL ++ V ++ Q ++R+ + G KR V I N+ +E + Sbjct: 1016 LGLNLTTASSVYVM-EPQFNPAAEAQAVDRV-----HRLGQKRPVRTVRYIMANSFEEKM 1069 Query: 181 LQRLRTKSTIQDLLLNA 197 L+ K + L ++ Sbjct: 1070 LRLQEKKKKLASLSMDG 1086 >gi|290980595|ref|XP_002673017.1| lar to transcriptional regulator ATRX (X-linked helicase II) [Naegleria gruberi] gi|284086598|gb|EFC40273.1| lar to transcriptional regulator ATRX (X-linked helicase II) [Naegleria gruberi] Length = 1366 Score = 78.1 bits (191), Expect = 8e-13, Method: Composition-based stats. Identities = 31/194 (15%), Positives = 61/194 (31%), Gaps = 42/194 (21%) Query: 39 AVYYDEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTLDK 96 V ++ K + K++ L IIEK N I+V + L ++ F + Sbjct: 811 PVLANDYKLHNARNSPKMEFLLRIIEKCYLNNEKILVFTQYVEMLDVMEAVFKHTPIVVG 870 Query: 97 DPCTIQEWN----------------EGKIP------------------LLFAHPASCGHG 122 +G I + + G G Sbjct: 871 TEEDEDNQTVPIRKTLSKGDDYLRMDGSISGRARQDLVDSFTEESTAHVFIISTKAGGLG 930 Query: 123 LNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQ 182 +NL +V F W+ +Q + R + G K+ V+VY + + +E + Sbjct: 931 INL-IAATRVVIFDPCWNDTWDKQA-----LFRAYRYGQKKPVYVYRFVTYGSAEEKIFN 984 Query: 183 RLRTKSTIQDLLLN 196 K+ + +++ Sbjct: 985 LSTAKAWLAKRIVD 998 >gi|46487453|gb|AAS99124.1| alpha thalassaemia mental retardation X-linked protein [Macropus eugenii] Length = 2464 Score = 78.1 bits (191), Expect = 8e-13, Method: Composition-based stats. Identities = 34/201 (16%), Positives = 68/201 (33%), Gaps = 25/201 (12%) Query: 9 RELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKI---KALEVIIE- 64 ++ D E +E + L++A +E V + + +E +E Sbjct: 1974 KDFVTDADAEVLEHSGKMVLLFEILRMA------EELGDKVLVFSQSLISLDLIEDFLEL 2027 Query: 65 ------KANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKI---PLLFAH 115 P+I T +E+N+ L Sbjct: 2028 ASREKSDDKDKPLIYKGEGKWFRNIDYYRLDGSTTAQSRKKWAEEFNDETNVRGRLFIIS 2087 Query: 116 PASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNT 175 + G+NL N ++ F W+ Q I R+ + G + V+VY +AQ T Sbjct: 2088 TKAGSLGINL-VAANRVIIFDASWNPSYDIQSIFRV-----YRFGQNKPVYVYRFLAQGT 2141 Query: 176 IDELVLQRLRTKSTIQDLLLN 196 +++ + R TK ++ +++ Sbjct: 2142 MEDKIYDRQVTKQSLSFRVVD 2162 >gi|194379178|dbj|BAG58140.1| unnamed protein product [Homo sapiens] Length = 858 Score = 78.1 bits (191), Expect = 8e-13, Method: Composition-based stats. Identities = 33/202 (16%), Positives = 71/202 (35%), Gaps = 27/202 (13%) Query: 9 RELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIE---- 64 ++ D E +E + L++A ++ + +E +E Sbjct: 369 KDFVTDADAEVLEHSGKMVLLFEILRMAEE---IGDKVLVFSQSLISLDLIEDFLELASR 425 Query: 65 ---KANAAPIIVAYHFNSDLARLQ----KAFPQGRTLDKDPCTIQEWNEGKI---PLLFA 114 + P+I + + L+ T +E+N+ L Sbjct: 426 EKTEDKDKPLI----YKGEGKWLRNIDHYRLDGSTTAQSRKKWAEEFNDETNVRGRLFII 481 Query: 115 HPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQN 174 + G+NL N ++ F W+ Q I R+ + G + V+VY +AQ Sbjct: 482 STKAGSLGINL-VAANRVIIFDASWNPSYDIQSIFRV-----YRFGQTKPVYVYRFLAQG 535 Query: 175 TIDELVLQRLRTKSTIQDLLLN 196 T+++ + R TK ++ +++ Sbjct: 536 TMEDKIYDRQVTKQSLSFRVVD 557 >gi|312137978|ref|YP_004005314.1| ATP-dependent DNA helicase [Rhodococcus equi 103S] gi|311887317|emb|CBH46628.1| putative ATP-dependent DNA helicase [Rhodococcus equi 103S] Length = 585 Score = 78.1 bits (191), Expect = 8e-13, Method: Composition-based stats. Identities = 36/206 (17%), Positives = 61/206 (29%), Gaps = 21/206 (10%) Query: 3 QYHKFQRELYCDLQGENIEAFN-SASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEV 61 Y E D G IE + Q+ N E K+ Sbjct: 359 IYDVLLAEAVDDGFGAGIERHGRVLAVLTALKQVCNHPGLITGEMDSLAGRSGKLDLCTD 418 Query: 62 II--EKANAAPIIVAYHFNSDLARLQKAFPQ-----------GRTLDKDPCTIQEWNEGK 108 I+ +P ++ + L + + G + + + Sbjct: 419 IVATNMETGSPTLIFTQYRRTGEMLVRHLAEQFDVVAPFLHGGLGQSERAEIVSRFQSED 478 Query: 109 -IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFV 167 P L + G GL L + +V F WW+ Q +R + G R V V Sbjct: 479 GPPALVLSLRAAGTGLTLTRAAD-VVHFDRWWNPAVEAQASDR-----AHRIGQTRTVTV 532 Query: 168 YYLIAQNTIDELVLQRLRTKSTIQDL 193 L + T++E + K+ + DL Sbjct: 533 TTLTSTTTVEEHIAGMHGHKAALTDL 558 >gi|168705829|ref|ZP_02738106.1| swi/snf family helicase_2 [Gemmata obscuriglobus UQM 2246] Length = 127 Score = 78.1 bits (191), Expect = 8e-13, Method: Composition-based stats. Identities = 22/85 (25%), Positives = 35/85 (41%), Gaps = 6/85 (7%) Query: 111 LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYL 170 +L + GLNLQ+ N + F WW+ Q I R + G K V V Sbjct: 18 VLLMSYGTGSVGLNLQF-TNYVFLFDRWWNPAIEDQAINR-----AHRLGQKHPVTVTRF 71 Query: 171 IAQNTIDELVLQRLRTKSTIQDLLL 195 ++ TI+ + L K + + L+ Sbjct: 72 LSGGTIEGRIADILDAKRKVFNDLI 96 >gi|316932603|ref|YP_004107585.1| helicase domain-containing protein [Rhodopseudomonas palustris DX-1] gi|315600317|gb|ADU42852.1| helicase domain protein [Rhodopseudomonas palustris DX-1] Length = 956 Score = 78.1 bits (191), Expect = 8e-13, Method: Composition-based stats. Identities = 32/163 (19%), Positives = 66/163 (40%), Gaps = 21/163 (12%) Query: 53 DEKIKALEVIIEKA---NAAPIIVAYHFNSDLARLQK-----------AFPQGRTLDKDP 98 D+K L +I++ + +++ + + A + G T D Sbjct: 511 DKKGNELVKLIDRLVNKDGKKVLIFTEYRATQAFILYILRSVLNIESVLIHGGHTADDKR 570 Query: 99 CTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQ 158 ++++ E +P+ + G GLN+ +IL+ + L W+ Q I R+ + Sbjct: 571 AAVEKF-EDDVPV-LISTEAGGEGLNMHRNCHILINYDLPWNPSRISQRIGRL-----YR 623 Query: 159 AGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 G K+ V V+ A++TID +L L + ++ + E Sbjct: 624 YGQKQRVIVFNFHAKDTIDNEILGVLIDRVMAIVATMSKVSAE 666 >gi|120611354|ref|YP_971032.1| helicase domain-containing protein [Acidovorax citrulli AAC00-1] gi|120589818|gb|ABM33258.1| helicase domain protein [Acidovorax citrulli AAC00-1] Length = 709 Score = 78.1 bits (191), Expect = 8e-13, Method: Composition-based stats. Identities = 32/164 (19%), Positives = 61/164 (37%), Gaps = 18/164 (10%) Query: 49 KEVHDEKIKALEVIIEKA-NAAPIIVAYHFNSDLARLQKAFPQ----------GRTLDKD 97 + + K+ L ++ + II+ + S + L++A + K Sbjct: 525 RTLESLKVPFLLDTVQSMGDDDKIIIFCEYMSTVDALKQALAGLGIGCVSLVGADSAKKR 584 Query: 98 PCTIQEWNE-GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 + + + + ++ G G+ L N++ F S+ W +Q +R Sbjct: 585 QAAVDAFQQVPTNKVFIGTTSAAGVGITLT-AANLVAFASMPWTPALMRQAEDR-----A 638 Query: 157 RQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKK 200 + G R V V I TIDE VL+ K T + ++ A K Sbjct: 639 YRLGQLRDVLVIVPIVPGTIDEGVLKLQDAKRTTEVEVVEAAKA 682 >gi|56759244|gb|AAW27762.1| SJCHGC05261 protein [Schistosoma japonicum] Length = 141 Score = 78.1 bits (191), Expect = 8e-13, Method: Composition-based stats. Identities = 22/84 (26%), Positives = 39/84 (46%), Gaps = 6/84 (7%) Query: 112 LFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLI 171 + A G GLNL G + ++F W+ + Q ++R + G R V VY LI Sbjct: 1 MLLTTAVGGLGLNLT-GADTVIFVEHDWNPSKDLQAMDR-----AHRIGQLRTVNVYRLI 54 Query: 172 AQNTIDELVLQRLRTKSTIQDLLL 195 +N+++E ++ K + +L Sbjct: 55 TENSVEEQIMNLQAFKLYLATTVL 78 >gi|317419683|emb|CBN81720.1| Helicase SRCAP [Dicentrarchus labrax] Length = 429 Score = 78.1 bits (191), Expect = 8e-13, Method: Composition-based stats. Identities = 26/133 (19%), Positives = 48/133 (36%), Gaps = 19/133 (14%) Query: 50 EVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQKAF---------PQGRTLDKDP 98 EV K++ L ++ K +++ L L++ G T + Sbjct: 303 EVSPLKLQTLHTLLRKLKTGGHRVLIFTQMTRMLDVLEQFLNYHGHIYLRLDGSTRVEQR 362 Query: 99 CTI-QEWNEGK-IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 + + +N + I S G G+NL G + +VF+ W+ Q +R Sbjct: 363 QALMERFNADRRIFCFILSTRSGGVGVNLT-GADTVVFYDSDWNPTMDAQAQDRC----- 416 Query: 157 RQAGFKRAVFVYY 169 + G R V +Y Sbjct: 417 HRIGQTRDVHIYR 429 >gi|308163064|gb|EFO65427.1| DNA repair and recombination protein Rhp26p [Giardia lamblia P15] Length = 930 Score = 78.1 bits (191), Expect = 8e-13, Method: Composition-based stats. Identities = 33/155 (21%), Positives = 59/155 (38%), Gaps = 20/155 (12%) Query: 48 WKEVHDEKI-----KALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQ 102 W + HD+ + + + I+E+ I+ F + R+ P +D P I Sbjct: 554 WNQSHDKVLVFCQGRMMLNIVERI----ILETASFKNAYLRMDGNIP----VDARPALIS 605 Query: 103 EW-NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGF 161 + + +I L G GLNL N + + W+ Q +ER + Sbjct: 606 RFSTDPQIRLFLLTTRVGGLGLNLT-AANHVFLLNPNWNPTIDDQSVERCW-----RITQ 659 Query: 162 KRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + V VY + TI+E + R K + +L+ Sbjct: 660 SKKVIVYKVFTGGTIEEKIFNRQIYKRLLVSRVLD 694 >gi|302816879|ref|XP_002990117.1| hypothetical protein SELMODRAFT_131060 [Selaginella moellendorffii] gi|300142130|gb|EFJ08834.1| hypothetical protein SELMODRAFT_131060 [Selaginella moellendorffii] Length = 700 Score = 77.7 bits (190), Expect = 8e-13, Method: Composition-based stats. Identities = 22/157 (14%), Positives = 56/157 (35%), Gaps = 21/157 (13%) Query: 52 HDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQ------------KAFPQGRTLDKD 97 K+ L ++ +++ L L+ + + + Sbjct: 317 ASAKLTLLHSMLGSLKKEGHRVLIFSQMTKLLDILEDYLTFEFGHDSYERVDGSVPVAER 376 Query: 98 PCTIQEWNEGKIP-LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 I+ +N+ + SCG G+NL + ++ + ++ Q + R Sbjct: 377 QAAIRRYNKDTSRFVFLLSTRSCGLGINL-ATADTVIIYDSDFNPHADIQAMNR-----A 430 Query: 157 RQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDL 193 + G + + VY L+ + +++E +L + K ++ L Sbjct: 431 HRIGQSKKLLVYRLLVRGSVEERILHLAKKKLELEQL 467 >gi|296815474|ref|XP_002848074.1| conserved hypothetical protein [Arthroderma otae CBS 113480] gi|238841099|gb|EEQ30761.1| conserved hypothetical protein [Arthroderma otae CBS 113480] Length = 1049 Score = 77.7 bits (190), Expect = 8e-13, Method: Composition-based stats. Identities = 30/162 (18%), Positives = 58/162 (35%), Gaps = 21/162 (12%) Query: 49 KEVHDEKIKALEVIIEK----ANAAPIIVAYHFNSDLARLQKAFP-----------QGRT 93 V K++A+ I + + I + F ++ L + Sbjct: 845 HMVPGAKLRAVRSFISQWLQDSPGTKITIFTQFIGMMSILCSLCETEGWGYTTLSGKLSH 904 Query: 94 LDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGV 153 + + E KI +L + + G GL+L + LWW+ QQ R+ Sbjct: 905 ATRHANIKRFREEEKINILISSLKAGGVGLDLTM-ATKCILLDLWWNEAIEQQAFCRLF- 962 Query: 154 TRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 + G K+ V + + NT+D+ + TKS + ++ Sbjct: 963 ----RIGQKKDVEIIRICVDNTVDDRIQLLQSTKSAHIEEVM 1000 >gi|126336343|ref|XP_001367984.1| PREDICTED: similar to hCG1997495, [Monodelphis domestica] Length = 1476 Score = 77.7 bits (190), Expect = 8e-13, Method: Composition-based stats. Identities = 32/180 (17%), Positives = 66/180 (36%), Gaps = 39/180 (21%) Query: 52 HDEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQKAFPQ------------------- 90 + K+ L +IE++ I+V S L+ +++ + Sbjct: 730 NSPKMVLLFHLIEESVKLGDKILVFSQSLSTLSVIEEFLAKRLMPCLPSSDGQRDQNWVR 789 Query: 91 --------GRT-LDKDPCTIQEWNEGKIP---LLFAHPASCGHGLNLQYGGNILVFFSLW 138 G T + I ++N+ L + G+NL G N +V F Sbjct: 790 NFSYYRLDGSTSASERERLINQFNDPNNSSVWLFLLSTRAGCLGVNL-IGANRVVVFDAS 848 Query: 139 WDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNAL 198 W+ Q + R + G K+ +Y L++ T+++ + R +K + D +++ L Sbjct: 849 WNPCHDAQAV-----CRVYRYGQKKPCHIYRLVSDYTLEKKIYDRQISKQGMSDRVVDDL 903 >gi|167463289|ref|ZP_02328378.1| helicase (Snf2/Rad54 family) protein [Paenibacillus larvae subsp. larvae BRL-230010] gi|322384854|ref|ZP_08058515.1| RNA polymerase-associated helicase-like protein [Paenibacillus larvae subsp. larvae B-3650] gi|321150323|gb|EFX43825.1| RNA polymerase-associated helicase-like protein [Paenibacillus larvae subsp. larvae B-3650] Length = 599 Score = 77.7 bits (190), Expect = 8e-13, Method: Composition-based stats. Identities = 29/155 (18%), Positives = 58/155 (37%), Gaps = 21/155 (13%) Query: 52 HDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRT-----LDKDPCTIQEW-- 104 + K + + +I +I+ + + L K ++W Sbjct: 374 SNTKAEKVMELIRNIQEK-VIIFTEYRASQEYLLKYLKDRGITAVPYRGGMNRGKKDWMM 432 Query: 105 ----NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 N ++ + G G+NLQ+ + ++ F L W+ +Q I R+ + G Sbjct: 433 DLFRNRAQV---LVATEAGGEGINLQF-CHHIINFDLPWNPMRVEQRIGRV-----HRLG 483 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 V +Y L Q TI+E +L L K + + ++ Sbjct: 484 QTNDVKIYNLSTQGTIEEHILNLLHEKINMFEAVI 518 >gi|322505242|emb|CAM39730.2| DNA repair protein-like protein [Leishmania braziliensis MHOM/BR/75/M2904] Length = 1288 Score = 77.7 bits (190), Expect = 9e-13, Method: Composition-based stats. Identities = 34/164 (20%), Positives = 61/164 (37%), Gaps = 23/164 (14%) Query: 44 EEKHWKEVHDEKIKALEVIIEKA-NAAPIIVAYHFNSDLARLQKAFPQGR---------- 92 + +W K + L I ++V F + L R + + Q Sbjct: 1075 DMSNWGLQLSSKTQYLIDKIRSLPADDKVVVFSTFLTYL-RCAQHWLQAAGVSSAVYTGS 1133 Query: 93 -TLDKDPCTIQEWNEGKIP----LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQM 147 T+ + ++ +++ P +L A +SCG GLNL N W+ +Q Sbjct: 1134 MTMKQKHSLLELFHDATQPASPRVLLATTSSCGVGLNLTC-ANHCFLMEPSWNPGTEEQA 1192 Query: 148 IERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQ 191 + RI + G + V + LIA TI++ + Q K + Sbjct: 1193 LNRI-----HRIGQTKPVTITKLIADGTIEQNISQLCERKRALS 1231 >gi|154340547|ref|XP_001566230.1| DNA repair protein-like protein [Leishmania braziliensis MHOM/BR/75/M2904] Length = 1288 Score = 77.7 bits (190), Expect = 9e-13, Method: Composition-based stats. Identities = 34/164 (20%), Positives = 61/164 (37%), Gaps = 23/164 (14%) Query: 44 EEKHWKEVHDEKIKALEVIIEKA-NAAPIIVAYHFNSDLARLQKAFPQGR---------- 92 + +W K + L I ++V F + L R + + Q Sbjct: 1075 DMSNWGLQLSSKTQYLIDKIRSLPADDKVVVFSTFLTYL-RCAQHWLQAAGVSSAVYTGS 1133 Query: 93 -TLDKDPCTIQEWNEGKIP----LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQM 147 T+ + ++ +++ P +L A +SCG GLNL N W+ +Q Sbjct: 1134 MTMKQKHSLLELFHDATQPASPRVLLATTSSCGVGLNLTC-ANHCFLMEPSWNPGTEEQA 1192 Query: 148 IERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQ 191 + RI + G + V + LIA TI++ + Q K + Sbjct: 1193 LNRI-----HRIGQTKPVTITKLIADGTIEQNISQLCERKRALS 1231 >gi|67591480|ref|XP_665565.1| DNA repair protein rhp16 [Cryptosporidium hominis TU502] gi|54656315|gb|EAL35335.1| DNA repair protein rhp16 [Cryptosporidium hominis] Length = 1236 Score = 77.7 bits (190), Expect = 9e-13, Method: Composition-based stats. Identities = 25/136 (18%), Positives = 43/136 (31%), Gaps = 21/136 (15%) Query: 52 HDEKIKAL-EVIIEKANAAPI---IVAYHFNSDLARLQKAFPQGRT----------LDKD 97 KI L E + + P IV F + L + + + + Sbjct: 1107 SSTKIDTLLEEVNKMMQEDPESKGIVFSQFTNMLDLVSYRLKKANIGCVMLAGSMSILQR 1166 Query: 98 PCTIQEWNE-GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 + +N+ + ++ + G GLNLQ N + WW+ Q R Sbjct: 1167 NSILYSFNKFPDLKIILISLKAGGEGLNLQV-ANYVFLLDPWWNPAAELQA-----FQRA 1220 Query: 157 RQAGFKRAVFVYYLIA 172 + G K+ V I Sbjct: 1221 HRIGQKKKVTALRFIT 1236 >gi|194384686|dbj|BAG59503.1| unnamed protein product [Homo sapiens] Length = 654 Score = 77.7 bits (190), Expect = 9e-13, Method: Composition-based stats. Identities = 33/202 (16%), Positives = 71/202 (35%), Gaps = 27/202 (13%) Query: 9 RELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIE---- 64 ++ D E +E + L++A ++ + +E +E Sbjct: 165 KDFVTDADAEVLEHSGKMVLLFEILRMAEE---IGDKVLVFSQSLISLDLIEDFLELASR 221 Query: 65 ---KANAAPIIVAYHFNSDLARLQ----KAFPQGRTLDKDPCTIQEWNEGKI---PLLFA 114 + P+I + + L+ T +E+N+ L Sbjct: 222 EKTEDKDKPLI----YKGEGKWLRNIDYYRLDGSTTAQSRKKWAEEFNDETNVRGRLFII 277 Query: 115 HPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQN 174 + G+NL N ++ F W+ Q I R+ + G + V+VY +AQ Sbjct: 278 STKAGSLGINL-VAANRVIIFDASWNPSYDIQSIFRV-----YRFGQTKPVYVYRFLAQG 331 Query: 175 TIDELVLQRLRTKSTIQDLLLN 196 T+++ + R TK ++ +++ Sbjct: 332 TMEDKIYDRQVTKQSLSFRVVD 353 >gi|115728810|ref|XP_792529.2| PREDICTED: similar to MGC108253 protein, partial [Strongylocentrotus purpuratus] gi|115946919|ref|XP_001183580.1| PREDICTED: similar to MGC108253 protein, partial [Strongylocentrotus purpuratus] Length = 338 Score = 77.7 bits (190), Expect = 9e-13, Method: Composition-based stats. Identities = 27/162 (16%), Positives = 67/162 (41%), Gaps = 19/162 (11%) Query: 53 DEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQKAFP---------QGRT-LDKDPCT 100 K + L+ ++ + + +++ F L +Q+ G+T + + Sbjct: 164 SGKFQLLDKMLAELKEQGSRVLLFSQFVMVLDIVQEYLKIRGHKFVRMDGQTPVAERAQL 223 Query: 101 IQEWNEGK-IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQA 159 I ++N+ + + + G G+NL N ++ + ++ +Q +R + Sbjct: 224 IDKFNKNDSVFIFMLSTRAGGVGINLT-AANTVILHDIDFNPYNDKQAEDRC-----HRV 277 Query: 160 GFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 G R V V L+++ TI+E +L + K ++ + + + E Sbjct: 278 GQTREVSVIRLVSKQTIEEGMLSCAKYKLKLEKQMTSGISGE 319 >gi|291407890|ref|XP_002720269.1| PREDICTED: transcriptional regulator ATRX [Oryctolagus cuniculus] Length = 2533 Score = 77.7 bits (190), Expect = 9e-13, Method: Composition-based stats. Identities = 34/202 (16%), Positives = 73/202 (36%), Gaps = 27/202 (13%) Query: 9 RELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIE---- 64 ++ D E +E + L++A ++ + +E +E Sbjct: 2044 KDFVTDADAEILEHSGKMVLLFEILRMAEE---IGDKVLVFSQSLISLDLIEDFLELASR 2100 Query: 65 ---KANAAPIIVAYHFNSD---LARLQKAFPQGRTLDKDPCT-IQEWNEGKI---PLLFA 114 + P+I + + L + G T + +E+N+ L Sbjct: 2101 EKTEDKDKPLI----YKGEGKWLRNIDYYRLDGSTTAQSRKKWAEEFNDETNVRGRLFII 2156 Query: 115 HPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQN 174 + G+NL N ++ F W+ Q I R+ + G + V+VY +AQ Sbjct: 2157 STKAGSLGINL-VAANRVIIFDASWNPSYDIQSIFRV-----YRFGQTKPVYVYRFLAQG 2210 Query: 175 TIDELVLQRLRTKSTIQDLLLN 196 T+++ + R TK ++ +++ Sbjct: 2211 TMEDKIYDRQVTKQSLSFRVVD 2232 >gi|317026691|ref|XP_001399362.2| SNF2 family helicase/ATPase [Aspergillus niger CBS 513.88] Length = 1116 Score = 77.7 bits (190), Expect = 9e-13, Method: Composition-based stats. Identities = 36/179 (20%), Positives = 64/179 (35%), Gaps = 29/179 (16%) Query: 50 EVHDEKIKAL-EVIIEKANA--------API--IVAYHFNSDLARLQKAFPQ-------- 90 E K KAL ++E A+ PI +V + S L ++ A Sbjct: 931 EGPHTKTKALVTQLLETADESKNQGPGERPIKSVVFSAWTSHLDLIEIALRDHDITGFTR 990 Query: 91 ----GRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 + + N I +L A + G GLNL + + ++ Q Sbjct: 991 LDGTMSLAARSKALEELHNNPDITVLLATIGAGGVGLNLTAASKVYIM-EPQYNPAAVAQ 1049 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIHV 205 ++R+ + G R V + + +I+E + + + K + DL LN K + V Sbjct: 1050 AVDRV-----HRIGQTREVTTVQFLMKGSIEEKIFELAKKKQQLADLSLNRGKLDKKEV 1103 >gi|260793856|ref|XP_002591926.1| hypothetical protein BRAFLDRAFT_184347 [Branchiostoma floridae] gi|229277139|gb|EEN47937.1| hypothetical protein BRAFLDRAFT_184347 [Branchiostoma floridae] Length = 563 Score = 77.7 bits (190), Expect = 9e-13, Method: Composition-based stats. Identities = 35/178 (19%), Positives = 63/178 (35%), Gaps = 27/178 (15%) Query: 24 NSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLAR 83 N+A + LQ N + D + LE +V H L Sbjct: 390 NNAEQRGALLQYFNETALV----KIPHIKDYVLDLLE------ADRKFLVFAHHQIVLDS 439 Query: 84 LQKAFPQ-----GRTLDKDPCTIQEW------NEGKIPLLFAHPASCGHGLNLQYGGNIL 132 L+ A + R K P I++ + + + GL L +++ Sbjct: 440 LRDALDKKGYGYIRIDGKTPSDIRQQLCDRYQTQDSCQVALLSITAASTGLTLT-AASLV 498 Query: 133 VFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 VF L+W+ Q +R + G + V V+YL+A+ T D+ + ++ K + Sbjct: 499 VFTELFWNPGVLVQAEDR-----AHRIGQQDCVNVHYLVARGTADDYIWPLVQGKLDV 551 >gi|126651081|ref|ZP_01723292.1| helicase (Snf2/Rad54 family) protein [Bacillus sp. B14905] gi|126592282|gb|EAZ86331.1| helicase (Snf2/Rad54 family) protein [Bacillus sp. B14905] Length = 504 Score = 77.7 bits (190), Expect = 9e-13, Method: Composition-based stats. Identities = 38/197 (19%), Positives = 81/197 (41%), Gaps = 20/197 (10%) Query: 7 FQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKA 66 Q+E+ + + N + + ++ A+ K + K + IIE+A Sbjct: 306 LQKEMCSSKEATALTLTNMLKEHGQSQEM--EAILA---KLMALEVNSKAEKTIEIIEQA 360 Query: 67 NAAPIIVAYHFNSDLARLQ-KAFPQGRT-------LDKDPCTIQEWNEGKIPLLFAHPAS 118 +I+ + + LQ +G T +K + + + + Sbjct: 361 KDK-VIIFTEYRATQIYLQWYLHSKGITSVLFNGKFNKSKRDYMKHLFKERAQVLIATEA 419 Query: 119 CGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDE 178 G G+NLQ+ + ++ + L W+ + +Q I R+ + G + V +Y L +NTI+E Sbjct: 420 GGEGINLQF-CHHVINYDLPWNPMKLEQRIGRV-----HRLGQEHDVHIYNLAIENTIEE 473 Query: 179 LVLQRLRTKSTIQDLLL 195 +L+ L TK + + ++ Sbjct: 474 KILELLHTKIDVFEKVV 490 >gi|5915738|sp|Q61687|ATRX_MOUSE RecName: Full=Transcriptional regulator ATRX; AltName: Full=ATP-dependent helicase ATRX; AltName: Full=HP1 alpha-interacting protein; AltName: Full=HP1-BP38 protein; AltName: Full=Heterochromatin protein 2; AltName: Full=X-linked nuclear protein gi|3002558|gb|AAC08741.1| ATRX protein [Mus musculus] Length = 2476 Score = 77.7 bits (190), Expect = 9e-13, Method: Composition-based stats. Identities = 33/205 (16%), Positives = 72/205 (35%), Gaps = 33/205 (16%) Query: 9 RELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKI---KALEVIIE- 64 ++ D E +E + L++A +E V + + +E +E Sbjct: 1986 KDFVTDTDAEVLEHSGKMVLLFEILRMA------EEIGDKVLVFSQSLISLDLIEDFLEL 2039 Query: 65 ------KANAAPIIVAYHFNSDLARLQ----KAFPQGRTLDKDPCTIQEWNEGKI---PL 111 + P+I + + ++ +E+N+ L Sbjct: 2040 ASREKTEDKEKPLI----YKGEGKWIRNIDYYRLDGSTNAQSRKKWAEEFNDETNVRGRL 2095 Query: 112 LFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLI 171 + G+NL N ++ F W+ Q I R+ + G + V+VY + Sbjct: 2096 FIISTKAGSLGINL-VAANRVIIFDASWNPSYDIQSIFRV-----YRFGQTKPVYVYRFL 2149 Query: 172 AQNTIDELVLQRLRTKSTIQDLLLN 196 AQ T+++ + R TK ++ +++ Sbjct: 2150 AQGTMEDKIYDRQVTKQSLSFRVVD 2174 >gi|154091016|ref|NP_033556.2| transcriptional regulator ATRX [Mus musculus] gi|123121759|emb|CAM16251.1| alpha thalassemia/mental retardation syndrome X-linked homolog (human) [Mus musculus] gi|123294232|emb|CAM19070.1| alpha thalassemia/mental retardation syndrome X-linked homolog (human) [Mus musculus] Length = 2476 Score = 77.7 bits (190), Expect = 9e-13, Method: Composition-based stats. Identities = 33/205 (16%), Positives = 72/205 (35%), Gaps = 33/205 (16%) Query: 9 RELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKI---KALEVIIE- 64 ++ D E +E + L++A +E V + + +E +E Sbjct: 1986 KDFVTDTDAEVLEHSGKMVLLFEILRMA------EEIGDKVLVFSQSLISLDLIEDFLEL 2039 Query: 65 ------KANAAPIIVAYHFNSDLARLQ----KAFPQGRTLDKDPCTIQEWNEGKI---PL 111 + P+I + + ++ +E+N+ L Sbjct: 2040 ASREKTEDKEKPLI----YKGEGKWIRNIDYYRLDGSTNAQSRKKWAEEFNDETNVRGRL 2095 Query: 112 LFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLI 171 + G+NL N ++ F W+ Q I R+ + G + V+VY + Sbjct: 2096 FIISTKAGSLGINL-VAANRVIIFDASWNPSYDIQSIFRV-----YRFGQTKPVYVYRFL 2149 Query: 172 AQNTIDELVLQRLRTKSTIQDLLLN 196 AQ T+++ + R TK ++ +++ Sbjct: 2150 AQGTMEDKIYDRQVTKQSLSFRVVD 2174 >gi|74007785|ref|XP_860057.1| PREDICTED: similar to transcriptional regulator ATRX isoform 1 isoform 4 [Canis familiaris] Length = 2482 Score = 77.7 bits (190), Expect = 9e-13, Method: Composition-based stats. Identities = 34/202 (16%), Positives = 73/202 (36%), Gaps = 27/202 (13%) Query: 9 RELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIE---- 64 ++ D E +E + L++A ++ + +E +E Sbjct: 1993 KDFVTDADAEILEHSGKMVLLFEILRMAEE---IGDKVLVFSQSLISLDLIEDFLELASR 2049 Query: 65 ---KANAAPIIVAYHFNSD---LARLQKAFPQGRTLDKDPCT-IQEWNEGKI---PLLFA 114 + P+I + + L + G T + +E+N+ L Sbjct: 2050 EKTEDKDKPLI----YKGEGKWLRNIDYYRLDGSTTAQSRKKWAEEFNDETNVRGRLFII 2105 Query: 115 HPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQN 174 + G+NL N ++ F W+ Q I R+ + G + V+VY +AQ Sbjct: 2106 STKAGSLGINL-VAANRVIIFDASWNPSYDIQSIFRV-----YRFGQTKPVYVYRFLAQG 2159 Query: 175 TIDELVLQRLRTKSTIQDLLLN 196 T+++ + R TK ++ +++ Sbjct: 2160 TMEDKIYDRQVTKQSLSFRVVD 2181 >gi|194228051|ref|XP_001502735.2| PREDICTED: similar to ATRX [Equus caballus] Length = 2491 Score = 77.7 bits (190), Expect = 9e-13, Method: Composition-based stats. Identities = 33/202 (16%), Positives = 71/202 (35%), Gaps = 27/202 (13%) Query: 9 RELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIE---- 64 ++ D E +E + L++A ++ + +E +E Sbjct: 2002 KDFVTDADAEVLEHSGKMVLLFEILRMAEE---IGDKVLVFSQSLISLDLIEDFLELASR 2058 Query: 65 ---KANAAPIIVAYHFNSDLARLQ----KAFPQGRTLDKDPCTIQEWNEGKI---PLLFA 114 + P+I + + L+ T +E+N+ L Sbjct: 2059 EKTEDKDKPLI----YKGEGKWLRNIDYYRLDGSTTAQSRKKWAEEFNDETNVRGRLFII 2114 Query: 115 HPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQN 174 + G+NL N ++ F W+ Q I R+ + G + V+VY +AQ Sbjct: 2115 STKAGSLGINL-VAANRVIIFDASWNPSYDIQSIFRV-----YRFGQTKPVYVYRFLAQG 2168 Query: 175 TIDELVLQRLRTKSTIQDLLLN 196 T+++ + R TK ++ +++ Sbjct: 2169 TMEDKIYDRQVTKQSLSFRVVD 2190 >gi|156550929|ref|XP_001603130.1| PREDICTED: hypothetical protein [Nasonia vitripennis] Length = 1160 Score = 77.7 bits (190), Expect = 9e-13, Method: Composition-based stats. Identities = 26/127 (20%), Positives = 52/127 (40%), Gaps = 11/127 (8%) Query: 75 YHFNSDLARLQKAFPQGRTLDKDP-----CTIQEWNEGKIPLLFAHPASCGHGLNLQYGG 129 ++F + R F +++ + T N + L + G G+NL G Sbjct: 909 FNFQDEWKRGLDYFRMDGSVNSEKRNSMCKTFNNPNNKRARLFLISTRAGGLGINL-IGA 967 Query: 130 NILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKST 189 N +V F W+ Q I RI + G + ++Y ++ T+++ + R TK + Sbjct: 968 NRVVIFDPSWNPSNDLQSIFRIF-----RFGQSKPCYIYRFLSAGTMEQKIYNRQVTKLS 1022 Query: 190 IQDLLLN 196 + +L+ Sbjct: 1023 LSLRVLD 1029 >gi|299751065|ref|XP_001830032.2| helicase SWR1 [Coprinopsis cinerea okayama7#130] gi|298409203|gb|EAU91697.2| helicase SWR1 [Coprinopsis cinerea okayama7#130] Length = 1624 Score = 77.7 bits (190), Expect = 9e-13, Method: Composition-based stats. Identities = 31/164 (18%), Positives = 69/164 (42%), Gaps = 31/164 (18%) Query: 55 KIKALEVIIEK--ANAAPIIVAYHFNSDLARLQ---------KAFPQGRTLDKDPCTI-Q 102 K++ L ++++ A +++ L L+ G T +D I + Sbjct: 1348 KLQRLAELLQEKKAGGHRVLIFTQMTRVLDILEVFLNHHGYLYLRLDGATKIEDRQYITE 1407 Query: 103 EWNEG-KIPLLFAHPASCGHGL---------NLQYGGNILVFFSLWWDLEEHQQMIERIG 152 +N +I + S G G+ +L G + ++F+ ++ + +Q +RI Sbjct: 1408 RFNADSRIFCFISSSRSGGIGIKTPQTDAKYSLT-GADTVIFYDSDFNPQMDRQCEDRI- 1465 Query: 153 VTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 G R V +Y ++Q T++E +L++ K ++ DL++ Sbjct: 1466 -------GQIRDVHIYRFVSQYTVEEAMLRKANQKRSLDDLVIQ 1502 >gi|224004070|ref|XP_002295686.1| predicted protein [Thalassiosira pseudonana CCMP1335] gi|209585718|gb|ACI64403.1| predicted protein [Thalassiosira pseudonana CCMP1335] Length = 338 Score = 77.7 bits (190), Expect = 9e-13, Method: Composition-based stats. Identities = 24/144 (16%), Positives = 52/144 (36%), Gaps = 24/144 (16%) Query: 52 HDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFP----QGRTLD------KDPC 99 K+ L+ ++ + A+ I++ F L ++ + +D K Sbjct: 199 ASGKLVLLDKLLPRLKADGHRILLFSQFKIMLDLIEDYLILRGFKSERIDGSITGLKRQA 258 Query: 100 TIQEW-----NEGKIP-LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGV 153 I + N + P ++ + G G+NL + + F W+ + Q R Sbjct: 259 AIDRYQSKGDNGRENPFIMLLSTRAGGVGINLT-AADTCIIFDSDWNPQNDLQAQARC-- 315 Query: 154 TRQRQAGFKRAVFVYYLIAQNTID 177 + G + V +Y L+ + T + Sbjct: 316 ---HRIGQTKNVKIYRLLTRKTYE 336 >gi|148682121|gb|EDL14068.1| alpha thalassemia/mental retardation syndrome X-linked homolog (human) [Mus musculus] Length = 2429 Score = 77.7 bits (190), Expect = 9e-13, Method: Composition-based stats. Identities = 33/205 (16%), Positives = 72/205 (35%), Gaps = 33/205 (16%) Query: 9 RELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKI---KALEVIIE- 64 ++ D E +E + L++A +E V + + +E +E Sbjct: 1939 KDFVTDTDAEVLEHSGKMVLLFEILRMA------EEIGDKVLVFSQSLISLDLIEDFLEL 1992 Query: 65 ------KANAAPIIVAYHFNSDLARLQ----KAFPQGRTLDKDPCTIQEWNEGKI---PL 111 + P+I + + ++ +E+N+ L Sbjct: 1993 ASREKTEDKEKPLI----YKGEGKWIRNIDYYRLDGSTNAQSRKKWAEEFNDETNVRGRL 2048 Query: 112 LFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLI 171 + G+NL N ++ F W+ Q I R+ + G + V+VY + Sbjct: 2049 FIISTKAGSLGINL-VAANRVIIFDASWNPSYDIQSIFRV-----YRFGQTKPVYVYRFL 2102 Query: 172 AQNTIDELVLQRLRTKSTIQDLLLN 196 AQ T+++ + R TK ++ +++ Sbjct: 2103 AQGTMEDKIYDRQVTKQSLSFRVVD 2127 >gi|66821527|ref|XP_644229.1| SNF2-related domain-containing protein [Dictyostelium discoideum AX4] gi|60472422|gb|EAL70375.1| SNF2-related domain-containing protein [Dictyostelium discoideum AX4] Length = 1400 Score = 77.7 bits (190), Expect = 9e-13, Method: Composition-based stats. Identities = 35/171 (20%), Positives = 66/171 (38%), Gaps = 20/171 (11%) Query: 48 WKEVHDEKIKALEVIIEKANAA--PIIVAYHFNSDLARLQKAFP---------QGRT--L 94 + E K+KA I +V H + L++A G T + Sbjct: 996 YVETGRAKLKASSDYIINLIKKNEKFLVFAHHADIMNGLEEAIKSTGAGYIRIDGSTPAV 1055 Query: 95 DKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 + + N + + G GL L N++VF L+W +Q +RI Sbjct: 1056 QRQAFVTKFQNNASCKVALLSITAAGTGLTLT-ASNLVVFVELYWTPGVLRQAEDRI--- 1111 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIHV 205 + G + +++YLI +NT+D+ + + K + L+ ++E +H Sbjct: 1112 --HRIGQTKTCYIHYLIGKNTLDDRIWPTICNKLEVLGETLDG-QEEVLHT 1159 >gi|301786781|ref|XP_002928805.1| PREDICTED: transcriptional regulator ATRX-like [Ailuropoda melanoleuca] Length = 2488 Score = 77.7 bits (190), Expect = 1e-12, Method: Composition-based stats. Identities = 33/202 (16%), Positives = 71/202 (35%), Gaps = 27/202 (13%) Query: 9 RELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIE---- 64 ++ D E +E + L++A ++ + +E +E Sbjct: 1999 KDFVTDADAEVLEHSGKMVLLFEILRMAEE---IGDKVLVFSQSLISLDLIEDFLELASR 2055 Query: 65 ---KANAAPIIVAYHFNSDLARLQ----KAFPQGRTLDKDPCTIQEWNEGKI---PLLFA 114 + P+I + + L+ T +E+N+ L Sbjct: 2056 EKTEDKDKPLI----YKGEGKWLRNIDYYRLDGSTTAQSRKKWAEEFNDETNVRGRLFII 2111 Query: 115 HPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQN 174 + G+NL N ++ F W+ Q I R+ + G + V+VY +AQ Sbjct: 2112 STKAGSLGINL-VAANRVIIFDASWNPSYDIQSIFRV-----YRFGQTKPVYVYRFLAQG 2165 Query: 175 TIDELVLQRLRTKSTIQDLLLN 196 T+++ + R TK ++ +++ Sbjct: 2166 TMEDKIYDRQVTKQSLSFRVVD 2187 >gi|2306766|gb|AAC51655.1| zinc finger helicase [Homo sapiens] Length = 2492 Score = 77.7 bits (190), Expect = 1e-12, Method: Composition-based stats. Identities = 33/202 (16%), Positives = 71/202 (35%), Gaps = 27/202 (13%) Query: 9 RELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIE---- 64 ++ D E +E + L++A ++ + +E +E Sbjct: 2003 KDFVTDADAEVLEHSGKMVLLFEILRMAEE---IGDKVLVFSQSLISLDLIEDFLELASR 2059 Query: 65 ---KANAAPIIVAYHFNSDLARLQ----KAFPQGRTLDKDPCTIQEWNEGKI---PLLFA 114 + P+I + + L+ T +E+N+ L Sbjct: 2060 EKTEDKDKPLI----YKGEGKWLRNIDYYRLDGSTTAQSRKKWAEEFNDETNVRGRLFII 2115 Query: 115 HPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQN 174 + G+NL N ++ F W+ Q I R+ + G + V+VY +AQ Sbjct: 2116 STKAGSLGINL-VAANRVIIFDASWNPSYDIQSIFRV-----YRFGQTKPVYVYRFLAQG 2169 Query: 175 TIDELVLQRLRTKSTIQDLLLN 196 T+++ + R TK ++ +++ Sbjct: 2170 TMEDKIYDRQVTKQSLSFRVVD 2191 >gi|57113917|ref|NP_001009018.1| transcriptional regulator ATRX [Pan troglodytes] gi|38502929|sp|Q7YQM4|ATRX_PANTR RecName: Full=Transcriptional regulator ATRX; AltName: Full=ATP-dependent helicase ATRX; AltName: Full=X-linked helicase II; AltName: Full=X-linked nuclear protein; Short=XNP gi|33354055|dbj|BAC81111.1| ATRX [Pan troglodytes] Length = 2492 Score = 77.7 bits (190), Expect = 1e-12, Method: Composition-based stats. Identities = 33/202 (16%), Positives = 71/202 (35%), Gaps = 27/202 (13%) Query: 9 RELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIE---- 64 ++ D E +E + L++A ++ + +E +E Sbjct: 2003 KDFVTDADAEVLEHSGKMVLLFEILRMAEE---IGDKVLVFSQSLISLDLIEDFLELASR 2059 Query: 65 ---KANAAPIIVAYHFNSDLARLQ----KAFPQGRTLDKDPCTIQEWNEGKI---PLLFA 114 + P+I + + L+ T +E+N+ L Sbjct: 2060 EKTEDKDKPLI----YKGEGKWLRNIDYYRLDGSTTAQSRKKWAEEFNDETNVRGRLFII 2115 Query: 115 HPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQN 174 + G+NL N ++ F W+ Q I R+ + G + V+VY +AQ Sbjct: 2116 STKAGSLGINL-VAANRVIIFDASWNPSYDIQSIFRV-----YRFGQTKPVYVYRFLAQG 2169 Query: 175 TIDELVLQRLRTKSTIQDLLLN 196 T+++ + R TK ++ +++ Sbjct: 2170 TMEDKIYDRQVTKQSLSFRVVD 2191 >gi|281353705|gb|EFB29289.1| hypothetical protein PANDA_018856 [Ailuropoda melanoleuca] Length = 2482 Score = 77.7 bits (190), Expect = 1e-12, Method: Composition-based stats. Identities = 33/202 (16%), Positives = 71/202 (35%), Gaps = 27/202 (13%) Query: 9 RELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIE---- 64 ++ D E +E + L++A ++ + +E +E Sbjct: 1993 KDFVTDADAEVLEHSGKMVLLFEILRMAEE---IGDKVLVFSQSLISLDLIEDFLELASR 2049 Query: 65 ---KANAAPIIVAYHFNSDLARLQ----KAFPQGRTLDKDPCTIQEWNEGKI---PLLFA 114 + P+I + + L+ T +E+N+ L Sbjct: 2050 EKTEDKDKPLI----YKGEGKWLRNIDYYRLDGSTTAQSRKKWAEEFNDETNVRGRLFII 2105 Query: 115 HPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQN 174 + G+NL N ++ F W+ Q I R+ + G + V+VY +AQ Sbjct: 2106 STKAGSLGINL-VAANRVIIFDASWNPSYDIQSIFRV-----YRFGQTKPVYVYRFLAQG 2159 Query: 175 TIDELVLQRLRTKSTIQDLLLN 196 T+++ + R TK ++ +++ Sbjct: 2160 TMEDKIYDRQVTKQSLSFRVVD 2181 >gi|83771803|dbj|BAE61933.1| unnamed protein product [Aspergillus oryzae] Length = 939 Score = 77.7 bits (190), Expect = 1e-12, Method: Composition-based stats. Identities = 29/149 (19%), Positives = 59/149 (39%), Gaps = 19/149 (12%) Query: 61 VIIEKA--NAAPIIVAYHFNSDLARL---------QKAFPQGRTLDKDPCT-IQEWNEG- 107 II+++ I+V H L + + + GRT + +N G Sbjct: 691 SIIDESIRAGDKILVFSHSIPTLDYIEHVLRSSNRKYSRLDGRTPVVTRQDATKRFNLGS 750 Query: 108 KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFV 167 + + + G GLN+ N ++ F + +Q + R + G ++ VFV Sbjct: 751 EKQVYLISTRAGGLGLNIPV-ANRVIIFDFKFSPVWEEQAVGR-----AYRLGQQKPVFV 804 Query: 168 YYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 Y IA T +E++ + K+ + +++ Sbjct: 805 YRFIAGGTFEEVMYNKAVFKTQLAFRVVD 833 >gi|33354053|dbj|BAC81110.1| ATRX [Homo sapiens] gi|133923365|gb|ABO43036.1| alpha thalassemia/mental retardation syndrome X-linked [Homo sapiens] Length = 2492 Score = 77.7 bits (190), Expect = 1e-12, Method: Composition-based stats. Identities = 33/202 (16%), Positives = 71/202 (35%), Gaps = 27/202 (13%) Query: 9 RELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIE---- 64 ++ D E +E + L++A ++ + +E +E Sbjct: 2003 KDFVTDADAEVLEHSGKMVLLFEILRMAEE---IGDKVLVFSQSLISLDLIEDFLELASR 2059 Query: 65 ---KANAAPIIVAYHFNSDLARLQ----KAFPQGRTLDKDPCTIQEWNEGKI---PLLFA 114 + P+I + + L+ T +E+N+ L Sbjct: 2060 EKTEDKDKPLI----YKGEGKWLRNIDYYRLDGSTTAQSRKKWAEEFNDETNVRGRLFII 2115 Query: 115 HPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQN 174 + G+NL N ++ F W+ Q I R+ + G + V+VY +AQ Sbjct: 2116 STKAGSLGINL-VAANRVIIFDASWNPSYDIQSIFRV-----YRFGQTKPVYVYRFLAQG 2169 Query: 175 TIDELVLQRLRTKSTIQDLLLN 196 T+++ + R TK ++ +++ Sbjct: 2170 TMEDKIYDRQVTKQSLSFRVVD 2191 >gi|20336209|ref|NP_000480.2| transcriptional regulator ATRX isoform 1 [Homo sapiens] gi|311033500|sp|P46100|ATRX_HUMAN RecName: Full=Transcriptional regulator ATRX; AltName: Full=ATP-dependent helicase ATRX; AltName: Full=X-linked helicase II; AltName: Full=X-linked nuclear protein; Short=XNP; AltName: Full=Znf-HX gi|6960326|gb|AAB49970.2| putative DNA dependent ATPase and helicase [Homo sapiens] gi|57208647|emb|CAI40710.1| alpha thalassemia/mental retardation syndrome X-linked (RAD54 homolog, S. cerevisiae) [Homo sapiens] gi|57210059|emb|CAI42674.1| alpha thalassemia/mental retardation syndrome X-linked (RAD54 homolog, S. cerevisiae) [Homo sapiens] gi|57284090|emb|CAI43115.1| alpha thalassemia/mental retardation syndrome X-linked (RAD54 homolog, S. cerevisiae) [Homo sapiens] gi|119619017|gb|EAW98611.1| alpha thalassemia/mental retardation syndrome X-linked (RAD54 homolog, S. cerevisiae), isoform CRA_a [Homo sapiens] gi|119619021|gb|EAW98615.1| alpha thalassemia/mental retardation syndrome X-linked (RAD54 homolog, S. cerevisiae), isoform CRA_a [Homo sapiens] Length = 2492 Score = 77.7 bits (190), Expect = 1e-12, Method: Composition-based stats. Identities = 33/202 (16%), Positives = 71/202 (35%), Gaps = 27/202 (13%) Query: 9 RELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIE---- 64 ++ D E +E + L++A ++ + +E +E Sbjct: 2003 KDFVTDADAEVLEHSGKMVLLFEILRMAEE---IGDKVLVFSQSLISLDLIEDFLELASR 2059 Query: 65 ---KANAAPIIVAYHFNSDLARLQ----KAFPQGRTLDKDPCTIQEWNEGKI---PLLFA 114 + P+I + + L+ T +E+N+ L Sbjct: 2060 EKTEDKDKPLI----YKGEGKWLRNIDYYRLDGSTTAQSRKKWAEEFNDETNVRGRLFII 2115 Query: 115 HPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQN 174 + G+NL N ++ F W+ Q I R+ + G + V+VY +AQ Sbjct: 2116 STKAGSLGINL-VAANRVIIFDASWNPSYDIQSIFRV-----YRFGQTKPVYVYRFLAQG 2169 Query: 175 TIDELVLQRLRTKSTIQDLLLN 196 T+++ + R TK ++ +++ Sbjct: 2170 TMEDKIYDRQVTKQSLSFRVVD 2191 >gi|2306809|gb|AAC51657.1| X-linked nuclear protein [Homo sapiens] Length = 2375 Score = 77.7 bits (190), Expect = 1e-12, Method: Composition-based stats. Identities = 33/202 (16%), Positives = 71/202 (35%), Gaps = 27/202 (13%) Query: 9 RELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIE---- 64 ++ D E +E + L++A ++ + +E +E Sbjct: 1886 KDFVTDADAEVLEHSGKMVLLFEILRMAEE---IGDKVLVFSQSLISLDLIEDFLELASR 1942 Query: 65 ---KANAAPIIVAYHFNSDLARLQ----KAFPQGRTLDKDPCTIQEWNEGKI---PLLFA 114 + P+I + + L+ T +E+N+ L Sbjct: 1943 EKTEDKDKPLI----YKGEGKWLRNIDYYRLDGSTTAQSRKKWAEEFNDETNVRGRLFII 1998 Query: 115 HPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQN 174 + G+NL N ++ F W+ Q I R+ + G + V+VY +AQ Sbjct: 1999 STKAGSLGINL-VAANRVIIFDASWNPSYDIQSIFRV-----YRFGQTKPVYVYRFLAQG 2052 Query: 175 TIDELVLQRLRTKSTIQDLLLN 196 T+++ + R TK ++ +++ Sbjct: 2053 TMEDKIYDRQVTKQSLSFRVVD 2074 >gi|38502928|sp|Q7YQM3|ATRX_PONPY RecName: Full=Transcriptional regulator ATRX; AltName: Full=ATP-dependent helicase ATRX; AltName: Full=X-linked helicase II; AltName: Full=X-linked nuclear protein; Short=XNP gi|33354057|dbj|BAC81112.1| ATRX [Pongo pygmaeus] Length = 2492 Score = 77.7 bits (190), Expect = 1e-12, Method: Composition-based stats. Identities = 33/202 (16%), Positives = 71/202 (35%), Gaps = 27/202 (13%) Query: 9 RELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIE---- 64 ++ D E +E + L++A ++ + +E +E Sbjct: 2003 KDFVTDADAEVLEHSGKMVLLFEILRMAEE---IGDKVLVFSQSLISLDLIEDFLELASR 2059 Query: 65 ---KANAAPIIVAYHFNSDLARLQ----KAFPQGRTLDKDPCTIQEWNEGKI---PLLFA 114 + P+I + + L+ T +E+N+ L Sbjct: 2060 EKTEDKDKPLI----YKGEGKWLRNIDYYRLDGSTTAQSRKKWAEEFNDETNVRGRLFII 2115 Query: 115 HPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQN 174 + G+NL N ++ F W+ Q I R+ + G + V+VY +AQ Sbjct: 2116 STKAGSLGINL-VAANRVIIFDASWNPSYDIQSIFRV-----YRFGQTKPVYVYRFLAQG 2169 Query: 175 TIDELVLQRLRTKSTIQDLLLN 196 T+++ + R TK ++ +++ Sbjct: 2170 TMEDKIYDRQVTKQSLSFRVVD 2191 >gi|20336205|ref|NP_612114.1| transcriptional regulator ATRX isoform 2 [Homo sapiens] gi|6960328|gb|AAB49971.2| putative DNA dependent ATPase and helicase [Homo sapiens] gi|57208648|emb|CAB90351.2| alpha thalassemia/mental retardation syndrome X-linked (RAD54 homolog, S. cerevisiae) [Homo sapiens] gi|57210060|emb|CAI42675.1| alpha thalassemia/mental retardation syndrome X-linked (RAD54 homolog, S. cerevisiae) [Homo sapiens] gi|57284091|emb|CAI43116.1| alpha thalassemia/mental retardation syndrome X-linked (RAD54 homolog, S. cerevisiae) [Homo sapiens] gi|119619020|gb|EAW98614.1| alpha thalassemia/mental retardation syndrome X-linked (RAD54 homolog, S. cerevisiae), isoform CRA_d [Homo sapiens] Length = 2454 Score = 77.7 bits (190), Expect = 1e-12, Method: Composition-based stats. Identities = 33/202 (16%), Positives = 71/202 (35%), Gaps = 27/202 (13%) Query: 9 RELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIE---- 64 ++ D E +E + L++A ++ + +E +E Sbjct: 1965 KDFVTDADAEVLEHSGKMVLLFEILRMAEE---IGDKVLVFSQSLISLDLIEDFLELASR 2021 Query: 65 ---KANAAPIIVAYHFNSDLARLQ----KAFPQGRTLDKDPCTIQEWNEGKI---PLLFA 114 + P+I + + L+ T +E+N+ L Sbjct: 2022 EKTEDKDKPLI----YKGEGKWLRNIDYYRLDGSTTAQSRKKWAEEFNDETNVRGRLFII 2077 Query: 115 HPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQN 174 + G+NL N ++ F W+ Q I R+ + G + V+VY +AQ Sbjct: 2078 STKAGSLGINL-VAANRVIIFDASWNPSYDIQSIFRV-----YRFGQTKPVYVYRFLAQG 2131 Query: 175 TIDELVLQRLRTKSTIQDLLLN 196 T+++ + R TK ++ +++ Sbjct: 2132 TMEDKIYDRQVTKQSLSFRVVD 2153 >gi|308174252|ref|YP_003920957.1| RNA polymerase-associated helicase protein [Bacillus amyloliquefaciens DSM 7] gi|307607116|emb|CBI43487.1| putative RNA polymerase-associated helicase protein [Bacillus amyloliquefaciens DSM 7] Length = 617 Score = 77.7 bits (190), Expect = 1e-12, Method: Composition-based stats. Identities = 34/161 (21%), Positives = 72/161 (44%), Gaps = 17/161 (10%) Query: 44 EEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQ---------GRTL 94 ++ + + K + +I+K N +I+ + + LQ Q G Sbjct: 409 MDRINQVTQNSKAIQVVDLIQKINDK-VIIFTEYRATQIYLQWFLQQNGISSVPFRGGFK 467 Query: 95 DKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 +++ GK+ +L A + G G+NLQ+ N ++ + L W+ +Q I RI Sbjct: 468 RGKKDWMKDLFRGKVQVLIA-TEAGGEGINLQF-CNHIINYDLPWNPMRLEQRIGRI--- 522 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 + G +R V +Y + ++T++E +L+ L K + + ++ Sbjct: 523 --HRLGQERDVHIYNMATKHTVEEHILKLLYDKIHLFENVV 561 >gi|109131297|ref|XP_001099874.1| PREDICTED: transcriptional regulator ATRX isoform 4 [Macaca mulatta] Length = 2490 Score = 77.7 bits (190), Expect = 1e-12, Method: Composition-based stats. Identities = 33/202 (16%), Positives = 71/202 (35%), Gaps = 27/202 (13%) Query: 9 RELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIE---- 64 ++ D E +E + L++A ++ + +E +E Sbjct: 2001 KDFVTDADAEVLEHSGKMVLLFEILRMAEE---IGDKVLVFSQSLISLDLIEDFLELASR 2057 Query: 65 ---KANAAPIIVAYHFNSDLARLQ----KAFPQGRTLDKDPCTIQEWNEGKI---PLLFA 114 + P+I + + L+ T +E+N+ L Sbjct: 2058 EKTEDKDKPLI----YKGEGKWLRNIDYYRLDGSTTAQSRKKWAEEFNDETNVRGRLFII 2113 Query: 115 HPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQN 174 + G+NL N ++ F W+ Q I R+ + G + V+VY +AQ Sbjct: 2114 STKAGSLGINL-VAANRVIIFDASWNPSYDIQSIFRV-----YRFGQTKPVYVYRFLAQG 2167 Query: 175 TIDELVLQRLRTKSTIQDLLLN 196 T+++ + R TK ++ +++ Sbjct: 2168 TMEDKIYDRQVTKQSLSFRVVD 2189 >gi|1778351|gb|AAB40698.1| putative DNA dependent ATPase and helicase [Homo sapiens] Length = 2375 Score = 77.7 bits (190), Expect = 1e-12, Method: Composition-based stats. Identities = 33/202 (16%), Positives = 71/202 (35%), Gaps = 27/202 (13%) Query: 9 RELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIE---- 64 ++ D E +E + L++A ++ + +E +E Sbjct: 1886 KDFVTDADAEVLEHSGKMVLLFEILRMAEE---IGDKVLVFSQSLISLDLIEDFLELASR 1942 Query: 65 ---KANAAPIIVAYHFNSDLARLQ----KAFPQGRTLDKDPCTIQEWNEGKI---PLLFA 114 + P+I + + L+ T +E+N+ L Sbjct: 1943 EKTEDKDKPLI----YKGEGKWLRNIDYYRLDGSTTAQSRKKWAEEFNDETNVRGRLFII 1998 Query: 115 HPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQN 174 + G+NL N ++ F W+ Q I R+ + G + V+VY +AQ Sbjct: 1999 STKAGSLGINL-VAANRVIIFDASWNPSYDIQSIFRV-----YRFGQTKPVYVYRFLAQG 2052 Query: 175 TIDELVLQRLRTKSTIQDLLLN 196 T+++ + R TK ++ +++ Sbjct: 2053 TMEDKIYDRQVTKQSLSFRVVD 2074 >gi|324501944|gb|ADY40860.1| Helicase ARIP4 [Ascaris suum] Length = 1138 Score = 77.3 bits (189), Expect = 1e-12, Method: Composition-based stats. Identities = 27/163 (16%), Positives = 62/163 (38%), Gaps = 33/163 (20%) Query: 61 VIIEKAN--AAPIIVAYHFNSDLARLQKA---------------FPQGRTLDK------- 96 II++A +++ L +++ + + +T + Sbjct: 770 DIIKQATEIGDKVLLFSQSLLTLNLIERYLEKFGAVCTPNAKITWKKNQTYLRFDGSTPA 829 Query: 97 --DPCTIQEWNE-GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGV 153 I +N+ ++ L + G+NL N ++ F W+ Q + RI Sbjct: 830 IDREKLINRFNDDPQVYLFLISTRAGSLGINL-VAANRVIIFDASWNPCHDAQAVCRI-- 886 Query: 154 TRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + G K+ F+Y L+ N++++ + R KS +Q +++ Sbjct: 887 ---YRYGQKKRTFIYRLVMDNSMEKGIFNRQIGKSGLQQRVVD 926 >gi|297710407|ref|XP_002831879.1| PREDICTED: transcriptional regulator ATRX-like [Pongo abelii] Length = 2454 Score = 77.3 bits (189), Expect = 1e-12, Method: Composition-based stats. Identities = 33/202 (16%), Positives = 71/202 (35%), Gaps = 27/202 (13%) Query: 9 RELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIE---- 64 ++ D E +E + L++A ++ + +E +E Sbjct: 1965 KDFVTDADAEVLEHSGKMVLLFEILRMAEE---IGDKVLVFSQSLISLDLIEDFLELASR 2021 Query: 65 ---KANAAPIIVAYHFNSDLARLQ----KAFPQGRTLDKDPCTIQEWNEGKI---PLLFA 114 + P+I + + L+ T +E+N+ L Sbjct: 2022 EKTEDKDKPLI----YKGEGKWLRNIDYYRLDGSTTAQSRKKWAEEFNDETNVRGRLFII 2077 Query: 115 HPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQN 174 + G+NL N ++ F W+ Q I R+ + G + V+VY +AQ Sbjct: 2078 STKAGSLGINL-VAANRVIIFDASWNPSYDIQSIFRV-----YRFGQTKPVYVYRFLAQG 2131 Query: 175 TIDELVLQRLRTKSTIQDLLLN 196 T+++ + R TK ++ +++ Sbjct: 2132 TMEDKIYDRQVTKQSLSFRVVD 2153 >gi|327265769|ref|XP_003217680.1| PREDICTED: helicase ARIP4-like [Anolis carolinensis] Length = 1479 Score = 77.3 bits (189), Expect = 1e-12, Method: Composition-based stats. Identities = 22/106 (20%), Positives = 46/106 (43%), Gaps = 9/106 (8%) Query: 96 KDPCTIQEWNEG---KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIG 152 + I ++N+ + L + G+NL G N +V F W+ Q + Sbjct: 805 ERERLINQFNDPTNTSVSLFLLSTRAGCLGVNL-IGANRVVVFDASWNPCHDAQAV---- 859 Query: 153 VTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNAL 198 R + G K+ +Y L++ T+++ + R +K + D +++ L Sbjct: 860 -CRVYRYGQKKPCHIYRLVSDFTLEKKIYDRQISKQGMSDRVVDDL 904 >gi|74137169|dbj|BAE21982.1| unnamed protein product [Mus musculus] Length = 995 Score = 77.3 bits (189), Expect = 1e-12, Method: Composition-based stats. Identities = 33/205 (16%), Positives = 72/205 (35%), Gaps = 33/205 (16%) Query: 9 RELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKI---KALEVIIE- 64 ++ D E +E + L++A +E V + + +E +E Sbjct: 778 KDFVTDTDAEVLEHSGKMVLLFEILRMA------EEIGDKVLVFSQSLISLDLIEDFLEL 831 Query: 65 ------KANAAPIIVAYHFNSDLARLQ----KAFPQGRTLDKDPCTIQEWNEGKI---PL 111 + P+I + + ++ +E+N+ L Sbjct: 832 ASREKTEDKEKPLI----YKGEGKWIRNIDYYRLDGSTNAQSRKKWAEEFNDETNVRGRL 887 Query: 112 LFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLI 171 + G+NL N ++ F W+ Q I R+ + G + V+VY + Sbjct: 888 FIISTKAGSLGINL-VAANRVIIFDASWNPSYDIQSIFRV-----YRFGQTKPVYVYRFL 941 Query: 172 AQNTIDELVLQRLRTKSTIQDLLLN 196 AQ T+++ + R TK ++ +++ Sbjct: 942 AQGTMEDKIYDRQVTKQSLSFRVVD 966 >gi|304314696|ref|YP_003849843.1| helicase domain related protein [Methanothermobacter marburgensis str. Marburg] gi|302588155|gb|ADL58530.1| helicase domain related protein [Methanothermobacter marburgensis str. Marburg] Length = 774 Score = 77.3 bits (189), Expect = 1e-12, Method: Composition-based stats. Identities = 37/199 (18%), Positives = 79/199 (39%), Gaps = 27/199 (13%) Query: 4 YHKFQRELYCDLQGENIEAFNSASKTVKCLQL-----ANGAVYYDEEKHWKEVHDEKIKA 58 Y + +++ + ++ +L + D E+ K + K+ Sbjct: 112 YSDLEERRIWEIE----SSLEGSTLADSIPELKAEVSTLEGLIEDAERLLKSGSETKLME 167 Query: 59 LEVIIEKANAAPIIVAYHFNSDLARLQKAFP----------QGRTLDKDPCTIQEWNEGK 108 L+ I+E+ I++ + L + G ++D+ ++ K Sbjct: 168 LQKILEEIGHEKILIFSESKDTVDYLLEKIESWGYSVCTIHGGMSMDERIAAEDDFRRNK 227 Query: 109 IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVY 168 + + G G+NLQ+ +I+V + + W+ +Q + RI + +R V +Y Sbjct: 228 Q--VMVATEAAGEGINLQF-CHIMVNYDIPWNPNRLEQRMGRI-----HRYKQRRDVHIY 279 Query: 169 YLIAQNTIDELVLQRLRTK 187 L+A NT + LV++RL K Sbjct: 280 NLVAGNTREGLVMRRLLEK 298 >gi|281422316|ref|ZP_06253315.1| helicase, Snf2 family [Prevotella copri DSM 18205] gi|281403637|gb|EFB34317.1| helicase, Snf2 family [Prevotella copri DSM 18205] Length = 805 Score = 77.3 bits (189), Expect = 1e-12, Method: Composition-based stats. Identities = 32/178 (17%), Positives = 70/178 (39%), Gaps = 24/178 (13%) Query: 33 LQLANGAVYYDEEKHWKEVHDEKIKALEVIIE---KANAAPIIVAYHFNSDLARLQKAFP 89 +++ + Y ++K +D K+ II ++V + + K Sbjct: 504 MRMVCDSSYILDQKTR---YDTKVDECVNIISDIISEEGEKVVVFSQWERMTRLIAKELE 560 Query: 90 Q----------GRTLDKDPCTIQEW-NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLW 138 + G +K + + NE + + GLNLQ ++ L Sbjct: 561 KKEIGFEYLHGGVPSEKRKNLVDNFMNEPSSRVFL-STDAGSTGLNLQSAA-TIINIDLP 618 Query: 139 WDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 W+ +Q I RI + G + + V L+ ++I++ +L +LR K+++ + +L+ Sbjct: 619 WNPAVLEQRIGRI-----YRLGQQNNIQVINLVTPDSIEQEMLGKLRFKTSMFEGVLD 671 >gi|109131301|ref|XP_001099769.1| PREDICTED: transcriptional regulator ATRX isoform 3 [Macaca mulatta] Length = 2452 Score = 77.3 bits (189), Expect = 1e-12, Method: Composition-based stats. Identities = 33/202 (16%), Positives = 71/202 (35%), Gaps = 27/202 (13%) Query: 9 RELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIE---- 64 ++ D E +E + L++A ++ + +E +E Sbjct: 1963 KDFVTDADAEVLEHSGKMVLLFEILRMAEE---IGDKVLVFSQSLISLDLIEDFLELASR 2019 Query: 65 ---KANAAPIIVAYHFNSDLARLQ----KAFPQGRTLDKDPCTIQEWNEGKI---PLLFA 114 + P+I + + L+ T +E+N+ L Sbjct: 2020 EKTEDKDKPLI----YKGEGKWLRNIDYYRLDGSTTAQSRKKWAEEFNDETNVRGRLFII 2075 Query: 115 HPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQN 174 + G+NL N ++ F W+ Q I R+ + G + V+VY +AQ Sbjct: 2076 STKAGSLGINL-VAANRVIIFDASWNPSYDIQSIFRV-----YRFGQTKPVYVYRFLAQG 2129 Query: 175 TIDELVLQRLRTKSTIQDLLLN 196 T+++ + R TK ++ +++ Sbjct: 2130 TMEDKIYDRQVTKQSLSFRVVD 2151 >gi|323356807|ref|YP_004223203.1| superfamily II DNA/RNA helicase, SNF2 family [Microbacterium testaceum StLB037] gi|323273178|dbj|BAJ73323.1| superfamily II DNA/RNA helicase, SNF2 family [Microbacterium testaceum StLB037] Length = 719 Score = 77.3 bits (189), Expect = 1e-12, Method: Composition-based stats. Identities = 25/107 (23%), Positives = 46/107 (42%), Gaps = 7/107 (6%) Query: 92 RTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 +T I +N + + + + G GLN+Q N +V L W E Q I+R Sbjct: 592 QTSTARQAAIDAFNSDPDVGIAVCSLTAAGVGLNMQAASN-VVLAELSWTAAEQTQAIDR 650 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + + G + V + +IA +TID + + + +K + L+ Sbjct: 651 V-----HRIGQEEPVTAWRIIAAHTIDTKIAELIDSKEGLAARALDG 692 >gi|119619019|gb|EAW98613.1| alpha thalassemia/mental retardation syndrome X-linked (RAD54 homolog, S. cerevisiae), isoform CRA_c [Homo sapiens] Length = 2446 Score = 77.3 bits (189), Expect = 1e-12, Method: Composition-based stats. Identities = 33/202 (16%), Positives = 71/202 (35%), Gaps = 27/202 (13%) Query: 9 RELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIE---- 64 ++ D E +E + L++A ++ + +E +E Sbjct: 2003 KDFVTDADAEVLEHSGKMVLLFEILRMAEE---IGDKVLVFSQSLISLDLIEDFLELASR 2059 Query: 65 ---KANAAPIIVAYHFNSDLARLQ----KAFPQGRTLDKDPCTIQEWNEGKI---PLLFA 114 + P+I + + L+ T +E+N+ L Sbjct: 2060 EKTEDKDKPLI----YKGEGKWLRNIDYYRLDGSTTAQSRKKWAEEFNDETNVRGRLFII 2115 Query: 115 HPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQN 174 + G+NL N ++ F W+ Q I R+ + G + V+VY +AQ Sbjct: 2116 STKAGSLGINL-VAANRVIIFDASWNPSYDIQSIFRV-----YRFGQTKPVYVYRFLAQG 2169 Query: 175 TIDELVLQRLRTKSTIQDLLLN 196 T+++ + R TK ++ +++ Sbjct: 2170 TMEDKIYDRQVTKQSLSFRVVD 2191 >gi|1778352|gb|AAB40699.1| putative DNA dependent ATPase and helicase [Homo sapiens] Length = 2337 Score = 77.3 bits (189), Expect = 1e-12, Method: Composition-based stats. Identities = 33/202 (16%), Positives = 71/202 (35%), Gaps = 27/202 (13%) Query: 9 RELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIE---- 64 ++ D E +E + L++A ++ + +E +E Sbjct: 1848 KDFVTDADAEVLEHSGKMVLLFEILRMAEE---IGDKVLVFSQSLISLDLIEDFLELASR 1904 Query: 65 ---KANAAPIIVAYHFNSDLARLQ----KAFPQGRTLDKDPCTIQEWNEGKI---PLLFA 114 + P+I + + L+ T +E+N+ L Sbjct: 1905 EKTEDKDKPLI----YKGEGKWLRNIDYYRLDGSTTAQSRKKWAEEFNDETNVRGRLFII 1960 Query: 115 HPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQN 174 + G+NL N ++ F W+ Q I R+ + G + V+VY +AQ Sbjct: 1961 STKAGSLGINL-VAANRVIIFDASWNPSYDIQSIFRV-----YRFGQTKPVYVYRFLAQG 2014 Query: 175 TIDELVLQRLRTKSTIQDLLLN 196 T+++ + R TK ++ +++ Sbjct: 2015 TMEDKIYDRQVTKQSLSFRVVD 2036 >gi|299470515|emb|CBN78506.1| conserved unknown protein [Ectocarpus siliculosus] Length = 2647 Score = 77.3 bits (189), Expect = 1e-12, Method: Composition-based stats. Identities = 20/112 (17%), Positives = 43/112 (38%), Gaps = 8/112 (7%) Query: 95 DKDPCTIQEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIG 152 + ++ +N K ++ + G GLNL + ++ + W+ Q R Sbjct: 1037 NMRTAAVERFNRPQFKRFVMLLSTRAGGLGLNLTT-ADTVIIYDSDWNPHNDLQAQAR-- 1093 Query: 153 VTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIH 204 + G +AV VY L+++ T + + + K + +L + E Sbjct: 1094 ---AHRIGQTKAVMVYRLLSKKTYEMHMFHQASLKLGLDKAVLAHARSEAQQ 1142 >gi|170058721|ref|XP_001865045.1| transcriptional regulator ATRX [Culex quinquefasciatus] gi|167877721|gb|EDS41104.1| transcriptional regulator ATRX [Culex quinquefasciatus] Length = 1268 Score = 77.3 bits (189), Expect = 1e-12, Method: Composition-based stats. Identities = 27/101 (26%), Positives = 44/101 (43%), Gaps = 9/101 (8%) Query: 99 CTIQEWNEG---KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTR 155 I +N+ + + G G+NL G N ++ W+ QQ I RI Sbjct: 192 KMITSFNDPSNKRTKCFLISAKAGGQGINL-IGANRVIILDTSWNPSNDQQNIFRIF--- 247 Query: 156 QRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + G KR +VY L+A T++E V R TK + +++ Sbjct: 248 --RLGQKRKCYVYRLLAMGTMEEKVYSRSVTKQAMSFRVVD 286 >gi|74007779|ref|XP_538084.2| PREDICTED: similar to transcriptional regulator ATRX isoform 1 isoform 1 [Canis familiaris] Length = 2489 Score = 77.3 bits (189), Expect = 1e-12, Method: Composition-based stats. Identities = 33/202 (16%), Positives = 71/202 (35%), Gaps = 27/202 (13%) Query: 9 RELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIE---- 64 ++ D E +E + L++A ++ + +E +E Sbjct: 2000 KDFVTDADAEILEHSGKMVLLFEILRMAEE---IGDKVLVFSQSLISLDLIEDFLELASR 2056 Query: 65 ---KANAAPIIVAYHFNSDLARLQ----KAFPQGRTLDKDPCTIQEWNEGKI---PLLFA 114 + P+I + + L+ T +E+N+ L Sbjct: 2057 EKTEDKDKPLI----YKGEGKWLRNIDYYRLDGSTTAQSRKKWAEEFNDETNVRGRLFII 2112 Query: 115 HPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQN 174 + G+NL N ++ F W+ Q I R+ + G + V+VY +AQ Sbjct: 2113 STKAGSLGINL-VAANRVIIFDASWNPSYDIQSIFRV-----YRFGQTKPVYVYRFLAQG 2166 Query: 175 TIDELVLQRLRTKSTIQDLLLN 196 T+++ + R TK ++ +++ Sbjct: 2167 TMEDKIYDRQVTKQSLSFRVVD 2188 >gi|193084170|gb|ACF09835.1| helicase SNF2/RAD54 family [uncultured marine crenarchaeote AD1000-207-H3] Length = 569 Score = 77.3 bits (189), Expect = 1e-12, Method: Composition-based stats. Identities = 37/151 (24%), Positives = 59/151 (39%), Gaps = 16/151 (10%) Query: 54 EKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQ--------GRTLDKDPCTIQEWN 105 I ++ I+E ++V H S L ++ + G++ I + Sbjct: 401 HVIDFVKNIMEIEE--SVVVFCHHISIHKLLHESLQEFNPASIIGGQSDKVRQKNIDYFQ 458 Query: 106 EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 G LL A + G+NL ++F L W + R R + G K V Sbjct: 459 NGDTKLLIAGLRAGNLGINLTR-AKYVIFAELDW-----VPAVHRQAEDRLHRIGQKNTV 512 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 F YYLI + T+DE V L KS D +++ Sbjct: 513 FAYYLIGKRTLDEHVANILVDKSYEIDAIMD 543 >gi|164425263|ref|XP_963002.2| hypothetical protein NCU06190 [Neurospora crassa OR74A] gi|157070856|gb|EAA33766.2| predicted protein [Neurospora crassa OR74A] Length = 1893 Score = 77.3 bits (189), Expect = 1e-12, Method: Composition-based stats. Identities = 26/122 (21%), Positives = 52/122 (42%), Gaps = 8/122 (6%) Query: 81 LARLQKAFPQGRT-LDKDPCTIQEWNE-GKIPLLFAHPASCGHGLNLQYGGNILVFFSLW 138 L ++ G+T + + ++E+N + + + G GLN+ G N +V F Sbjct: 1365 LKKINYRKLDGKTPVSQRQAAVKEFNAVDSLDVYLISTRAGGVGLNI-PGANRVVLFDFG 1423 Query: 139 WDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNAL 198 + E QQ + R + G ++ VFVY+L T + + K + + +++ Sbjct: 1424 FTPAEEQQAVGR-----AYRIGQEKKVFVYHLKVGGTYETAIHNLAIFKRQLSERVVDKK 1478 Query: 199 KK 200 K Sbjct: 1479 KP 1480 >gi|74007783|ref|XP_860017.1| PREDICTED: similar to transcriptional regulator ATRX isoform 1 isoform 3 [Canis familiaris] Length = 2501 Score = 77.3 bits (189), Expect = 1e-12, Method: Composition-based stats. Identities = 33/202 (16%), Positives = 71/202 (35%), Gaps = 27/202 (13%) Query: 9 RELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIE---- 64 ++ D E +E + L++A ++ + +E +E Sbjct: 2012 KDFVTDADAEILEHSGKMVLLFEILRMAEE---IGDKVLVFSQSLISLDLIEDFLELASR 2068 Query: 65 ---KANAAPIIVAYHFNSDLARLQ----KAFPQGRTLDKDPCTIQEWNEGKI---PLLFA 114 + P+I + + L+ T +E+N+ L Sbjct: 2069 EKTEDKDKPLI----YKGEGKWLRNIDYYRLDGSTTAQSRKKWAEEFNDETNVRGRLFII 2124 Query: 115 HPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQN 174 + G+NL N ++ F W+ Q I R+ + G + V+VY +AQ Sbjct: 2125 STKAGSLGINL-VAANRVIIFDASWNPSYDIQSIFRV-----YRFGQTKPVYVYRFLAQG 2178 Query: 175 TIDELVLQRLRTKSTIQDLLLN 196 T+++ + R TK ++ +++ Sbjct: 2179 TMEDKIYDRQVTKQSLSFRVVD 2200 >gi|46121223|ref|XP_385166.1| hypothetical protein FG04990.1 [Gibberella zeae PH-1] Length = 1057 Score = 77.3 bits (189), Expect = 1e-12, Method: Composition-based stats. Identities = 33/159 (20%), Positives = 58/159 (36%), Gaps = 22/159 (13%) Query: 54 EKIKALEVII----EKANAAPIIVAYHFNSDLARLQKAFPQGRTL------------DKD 97 K+ A +I + + IIV F L + K Sbjct: 832 AKLTATVEVILTWLQNSPKDKIIVFIEFTITAKALGCILEKLGLKFLYYNQIASTPARKV 891 Query: 98 PCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 + N I +L A G GLNLQ N+++ +W++ QQ R+ Sbjct: 892 KAYNEFQNNSDIRILVASIKCGGTGLNLQI-ANLVIIDDIWFNTTVEQQAFGRVN----- 945 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + G K+ + ++A+ T+DE ++ K+ I +L Sbjct: 946 RIGQKKETKLVRILARGTLDERLVMLQDAKAAIVSNVLQ 984 >gi|164426466|ref|XP_960853.2| hypothetical protein NCU04229 [Neurospora crassa OR74A] gi|157071347|gb|EAA31617.2| hypothetical protein NCU04229 [Neurospora crassa OR74A] Length = 1135 Score = 77.3 bits (189), Expect = 1e-12, Method: Composition-based stats. Identities = 21/82 (25%), Positives = 33/82 (40%), Gaps = 6/82 (7%) Query: 111 LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYL 170 + + G GLN+ N +V F W+ Q R + G R V V+ L Sbjct: 608 VFLISTKAGGVGLNIT-SANKVVIFDPHWNPSYDLQA-----QDRAYRIGQIRDVDVFRL 661 Query: 171 IAQNTIDELVLQRLRTKSTIQD 192 ++ TI+E+V R K + Sbjct: 662 VSAGTIEEIVYARQIYKQQQAN 683 >gi|255556614|ref|XP_002519341.1| Chromatin remodelling complex ATPase chain isw-1, putative [Ricinus communis] gi|223541656|gb|EEF43205.1| Chromatin remodelling complex ATPase chain isw-1, putative [Ricinus communis] Length = 674 Score = 77.3 bits (189), Expect = 1e-12, Method: Composition-based stats. Identities = 36/212 (16%), Positives = 81/212 (38%), Gaps = 29/212 (13%) Query: 1 MKQYHKFQRELYCDLQGENIEAFNSA--SKTVKCLQ--LANGAVYYDEEKHWKEVHDEKI 56 MK+ + RE ++ I+A +SA +++K + + N +Y D + + Sbjct: 431 MKKINALFRE--LEVVKGKIKACSSAEEVESLKFSEKNIIN-KIYTDSAEAKIPG---VL 484 Query: 57 KALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRT-----------LDKDPCTIQEWN 105 L +IE ++ H + + + + + + + Sbjct: 485 DYLATVIEA--GCKFLIFAHHQPMIDSIHEFLVKKKVGCIRIDGRTPPVSRQSLVTDFQE 542 Query: 106 EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 + I + G GL L + ++F L W + Q +R + G +V Sbjct: 543 KDAIKAAVLSIKAGGVGLTLT-AASTVIFAELSWTPGDLIQAEDR-----AHRIGQVSSV 596 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 +YYL+A +T+D+++ +++K +L+ Sbjct: 597 NIYYLLANDTVDDIIWDVVQSKLENLGQMLDG 628 >gi|238506885|ref|XP_002384644.1| helicase, putative [Aspergillus flavus NRRL3357] gi|220689357|gb|EED45708.1| helicase, putative [Aspergillus flavus NRRL3357] Length = 602 Score = 77.3 bits (189), Expect = 1e-12, Method: Composition-based stats. Identities = 32/176 (18%), Positives = 73/176 (41%), Gaps = 18/176 (10%) Query: 25 SASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPII---VAYHFNSDL 81 +++K VK ++ G + + + + + + L ++ N + V+ + +L Sbjct: 392 TSAKLVKIQEIVKGWIDENPDVKIV-IFTQFLDFLRLVGLMCNKEKWVATSVSSNLRHNL 450 Query: 82 ARLQKAFPQGRT-------LDKDPCTIQEW-NEGKIPLLFAHPASCGHGLNLQYGGNILV 133 + RT L ++ ++ +E ++ +L A + G GL++ N + Sbjct: 451 PLIHGGSAANRTQLHGKLSLQAREQSMDKFRDEKEVRILIASLKAGGIGLDMSM-ANKCI 509 Query: 134 FFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKST 189 LWW+ QQ R+ + G + V +I +++IDE +L+ K+ Sbjct: 510 LVDLWWNEAIQQQAFCRL-----YRIGQSKDVEFVKIIIKDSIDEYLLKMQTRKTA 560 >gi|193678803|ref|XP_001948361.1| PREDICTED: transcription termination factor 2-like isoform 1 [Acyrthosiphon pisum] gi|328713458|ref|XP_003245082.1| PREDICTED: transcription termination factor 2-like isoform 2 [Acyrthosiphon pisum] Length = 1133 Score = 77.3 bits (189), Expect = 1e-12, Method: Composition-based stats. Identities = 39/217 (17%), Positives = 75/217 (34%), Gaps = 30/217 (13%) Query: 5 HKFQRELYCDLQGENIEAFNSASKTVKCLQLANGA--VYYDEEKHWKEVHDEK-----IK 57 + G K +++ G + D K+ + +EK IK Sbjct: 900 KNMLEDECLKTDGIQNNGD--LDIVDKLSRMSIGIPNIENDTVKNSNVIFNEKWISSKIK 957 Query: 58 ALEVIIEK---ANAAPIIVAYHFNSDLARLQKAFPQGRTLDK----------DPCTIQEW 104 A+ ++++ ++ + S L + K Q + I E+ Sbjct: 958 AVCDMVKEKVLHTDDKAVIVSQWPSVLNLVNKQLSQYNVKTEIFSGAVPVLLRNKIISEF 1017 Query: 105 NE--GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFK 162 ++ G +L + G GLNL N L + W+ + Q +RI + G + Sbjct: 1018 DKVRGGPKILLLSLTAGGVGLNLVV-ANHLFLVDIHWNPQLEAQACDRI-----YRVGQQ 1071 Query: 163 RAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 + V VY I NTI+ + + K I + + + Sbjct: 1072 KPVNVYKFICDNTIESSIQKIQTQKLEIANNIFGGSR 1108 >gi|189203985|ref|XP_001938328.1| helicase SWR1 [Pyrenophora tritici-repentis Pt-1C-BFP] gi|187985427|gb|EDU50915.1| helicase SWR1 [Pyrenophora tritici-repentis Pt-1C-BFP] Length = 1118 Score = 77.3 bits (189), Expect = 1e-12, Method: Composition-based stats. Identities = 26/139 (18%), Positives = 53/139 (38%), Gaps = 17/139 (12%) Query: 67 NAAPIIVAYHFNS---------DLARLQKAFPQGRTLDKDPCTIQE--WNEGKIPLLFAH 115 N +V F S D + G T ++ ++ + + + I L Sbjct: 915 NGDRALVFSQFTSVMDILGWVFDDHDINFMRMDGSTPIQERQSLMDVFYQDESIQLFMIS 974 Query: 116 PASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNT 175 S G G+NL N ++ F ++ ++ Q R + G R V V L+ ++T Sbjct: 975 TKSGGAGINL-ACANKVIIFDSSFNPQDDIQA-----ENRAHRVGQTREVEVVRLVTKDT 1028 Query: 176 IDELVLQRLRTKSTIQDLL 194 ++E + +K + ++ Sbjct: 1029 VEEQIYALGVSKLELDKMV 1047 >gi|74007787|ref|XP_860092.1| PREDICTED: similar to transcriptional regulator ATRX isoform 1 isoform 5 [Canis familiaris] Length = 2460 Score = 77.3 bits (189), Expect = 1e-12, Method: Composition-based stats. Identities = 33/202 (16%), Positives = 71/202 (35%), Gaps = 27/202 (13%) Query: 9 RELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIE---- 64 ++ D E +E + L++A ++ + +E +E Sbjct: 1971 KDFVTDADAEILEHSGKMVLLFEILRMAEE---IGDKVLVFSQSLISLDLIEDFLELASR 2027 Query: 65 ---KANAAPIIVAYHFNSDLARLQ----KAFPQGRTLDKDPCTIQEWNEGKI---PLLFA 114 + P+I + + L+ T +E+N+ L Sbjct: 2028 EKTEDKDKPLI----YKGEGKWLRNIDYYRLDGSTTAQSRKKWAEEFNDETNVRGRLFII 2083 Query: 115 HPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQN 174 + G+NL N ++ F W+ Q I R+ + G + V+VY +AQ Sbjct: 2084 STKAGSLGINL-VAANRVIIFDASWNPSYDIQSIFRV-----YRFGQTKPVYVYRFLAQG 2137 Query: 175 TIDELVLQRLRTKSTIQDLLLN 196 T+++ + R TK ++ +++ Sbjct: 2138 TMEDKIYDRQVTKQSLSFRVVD 2159 >gi|8777308|dbj|BAA96898.1| unnamed protein product [Arabidopsis thaliana] Length = 1053 Score = 77.3 bits (189), Expect = 1e-12, Method: Composition-based stats. Identities = 27/152 (17%), Positives = 57/152 (37%), Gaps = 19/152 (12%) Query: 40 VYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPC 99 V D+ + + K+ + +++ + Y F R+ L Sbjct: 705 VDTDDFQTKNDSISCKLSFIMSLLDSLTSNG----YSFL----RIDGTTKAPDRL----K 752 Query: 100 TIQEWNEGKI-PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQ 158 T++E+ EG + P+ G GL L + ++ W+ Q ++R + Sbjct: 753 TVEEFQEGHVAPIFLLTSQVGGLGLTLTK-ADRVIVVDPAWNPSTDNQSVDR-----AYR 806 Query: 159 AGFKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 G + V VY L+ T++E + ++ K + Sbjct: 807 IGQTKDVIVYRLMTSATVEEKIYRKQVYKGGL 838 >gi|308273413|emb|CBX30015.1| hypothetical protein N47_D28240 [uncultured Desulfobacterium sp.] Length = 928 Score = 77.3 bits (189), Expect = 1e-12, Method: Composition-based stats. Identities = 50/213 (23%), Positives = 76/213 (35%), Gaps = 45/213 (21%) Query: 1 MKQYHKFQRELY---CDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEV------ 51 +K+ KF+ E+ D+ EA + A DEEK KE+ Sbjct: 456 LKKRPKFEEEVTHWALDVMESEDEAIEA------------DANIPDEEKKVKELIDLVDE 503 Query: 52 -HDEKIKALEVIIE----KANAAPIIVAYHFNSDLARLQKAF------------PQGRTL 94 D K L IE + +I+ + L L++ G Sbjct: 504 KADRKFDTLIRAIEQIRRENKNDKMIIFTQYLETLYYLKEELGKYYPPEKIAILKGGPLE 563 Query: 95 DKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 DK W+E ++ G G+NLQ +L + L W+ +Q I RI Sbjct: 564 DKIASCESFWDESGAQ-FLISTSAGGEGINLQV-CRLLFNYDLPWNPMAVEQRIGRI--- 618 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTK 187 + G VY L+A+ TI+E V + L K Sbjct: 619 --HRYGQTETAQVYNLVAEETIEEQVYKILEEK 649 >gi|297279766|ref|XP_001087747.2| PREDICTED: DNA repair and recombination protein RAD54-like, partial [Macaca mulatta] Length = 185 Score = 77.3 bits (189), Expect = 1e-12, Method: Composition-based stats. Identities = 22/115 (19%), Positives = 45/115 (39%), Gaps = 18/115 (15%) Query: 70 PIIVAYHFNSDLARLQK----------AFPQGRTLDKDPCTIQEWNEGKIP--LLFAHPA 117 +++ ++ L +K ++ K ++ +N P + Sbjct: 74 KVVLVSNYTQTLDLFEKLCRARRYLYVRLDGTMSIKKRAKVVERFNSPSSPDFVFMLSSK 133 Query: 118 SCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIA 172 + G GLNL G N LV F W+ +Q + R+ + G K+ ++Y L++ Sbjct: 134 AGGCGLNL-IGANRLVMFDPDWNPANDEQAMARVW-----RDGQKKTCYIYRLLS 182 >gi|1778307|gb|AAB49969.1| putative DNA dependent ATPase and helicase [Homo sapiens] gi|1778353|gb|AAB40700.1| putative DNA dependent ATPase and helicase [Homo sapiens] gi|225356534|gb|AAI56297.1| Alpha thalassemia/mental retardation syndrome X-linked (RAD54 homolog, S. cerevisiae) [synthetic construct] Length = 2288 Score = 77.3 bits (189), Expect = 1e-12, Method: Composition-based stats. Identities = 33/202 (16%), Positives = 71/202 (35%), Gaps = 27/202 (13%) Query: 9 RELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIE---- 64 ++ D E +E + L++A ++ + +E +E Sbjct: 1799 KDFVTDADAEVLEHSGKMVLLFEILRMAEE---IGDKVLVFSQSLISLDLIEDFLELASR 1855 Query: 65 ---KANAAPIIVAYHFNSDLARLQ----KAFPQGRTLDKDPCTIQEWNEGKI---PLLFA 114 + P+I + + L+ T +E+N+ L Sbjct: 1856 EKTEDKDKPLI----YKGEGKWLRNIDYYRLDGSTTAQSRKKWAEEFNDETNVRGRLFII 1911 Query: 115 HPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQN 174 + G+NL N ++ F W+ Q I R+ + G + V+VY +AQ Sbjct: 1912 STKAGSLGINL-VAANRVIIFDASWNPSYDIQSIFRV-----YRFGQTKPVYVYRFLAQG 1965 Query: 175 TIDELVLQRLRTKSTIQDLLLN 196 T+++ + R TK ++ +++ Sbjct: 1966 TMEDKIYDRQVTKQSLSFRVVD 1987 >gi|17538806|ref|NP_501545.1| RADiation sensitivity abnormal/yeast RAD-related family member (rad-26) [Caenorhabditis elegans] gi|3874525|emb|CAA90984.1| C. elegans protein C27B7.4, partially confirmed by transcript evidence [Caenorhabditis elegans] Length = 1274 Score = 77.3 bits (189), Expect = 1e-12, Method: Composition-based stats. Identities = 29/170 (17%), Positives = 59/170 (34%), Gaps = 32/170 (18%) Query: 59 LEVIIEKAN-AAPIIVAYHFNSDLARLQKAFPQGRTLDKD-------------------- 97 LE++ E I++ + L L++ + + KD Sbjct: 783 LEILDESTQIGEKILIFSQNLTALDMLEEILKKRQIRGKDGPGQRWEKNRNYLRLDGTTS 842 Query: 98 ----PCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIG 152 I +N E + L + G+NL N + W+ Q + Sbjct: 843 GADREKLINRFNSEPGLSLFLISTRAGSLGINL-VSANRCIIIDACWNPCHDAQAV---- 897 Query: 153 VTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKET 202 R + G ++ FVY LI N+++ + R +K +Q +++ + + Sbjct: 898 -CRVYRYGQQKKTFVYRLIMDNSMERSIFNRQISKHGLQQRVVDDAQVDA 946 >gi|238594429|ref|XP_002393482.1| hypothetical protein MPER_06777 [Moniliophthora perniciosa FA553] gi|215461019|gb|EEB94412.1| hypothetical protein MPER_06777 [Moniliophthora perniciosa FA553] Length = 207 Score = 77.3 bits (189), Expect = 1e-12, Method: Composition-based stats. Identities = 27/143 (18%), Positives = 49/143 (34%), Gaps = 19/143 (13%) Query: 52 HDEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQKAFPQGRTLD----------KDPC 99 K+ L I K I + S L ++K F + Sbjct: 45 PSTKMLKLIDYISKWETIGDKTICYSQWTSMLDLIEKLFSRYGIRSVRFDGKMDRTSREQ 104 Query: 100 TIQEWNEGKIP-LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQ 158 + + P ++ G GLNL N ++ + W+ Q +R + Sbjct: 105 ALSTFKSPTGPKVILISTKCGGVGLNL-VAANRVINMDVSWNFAAESQAYDR-----AHR 158 Query: 159 AGFKRAVFVYYLIAQNTIDELVL 181 G ++ V++ L+ NTI+E +L Sbjct: 159 IGQEKNVYIKRLVVANTIEERML 181 >gi|221481667|gb|EEE20043.1| DNA excision repair protein ERCC6, putative [Toxoplasma gondii GT1] Length = 1553 Score = 77.3 bits (189), Expect = 1e-12, Method: Composition-based stats. Identities = 30/177 (16%), Positives = 52/177 (29%), Gaps = 39/177 (22%) Query: 53 DEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQK------------------------ 86 K+ L ++ KA +++ L LQ+ Sbjct: 1020 SGKLIVLREVLRVWKAEGRRVLLFAQTVQMLDILQRFLETCDPSVPSSSSSAPSSTIGGK 1079 Query: 87 ------AFPQGRTLDKDPCTIQEWNEGK-IPLLFAHPASCGHGLNLQYGGNILVFFSLWW 139 G + + + I L G GLNL + +V F W Sbjct: 1080 KGFSFLRLDGGVPVASRHAIVDSFQRDSSIFALLLTTRVGGVGLNLT-AADRVVIFDPDW 1138 Query: 140 DLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + Q ER + G + V +Y L+ +++E V R K + +L Sbjct: 1139 NPMTDMQARERSW-----RIGQSKDVCIYRLLTSGSVEEKVYHRQVFKFFLSQKVLQ 1190 >gi|237832233|ref|XP_002365414.1| DNA excision repair protein, putative [Toxoplasma gondii ME49] gi|211963078|gb|EEA98273.1| DNA excision repair protein, putative [Toxoplasma gondii ME49] Length = 1555 Score = 77.3 bits (189), Expect = 1e-12, Method: Composition-based stats. Identities = 30/177 (16%), Positives = 52/177 (29%), Gaps = 39/177 (22%) Query: 53 DEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQK------------------------ 86 K+ L ++ KA +++ L LQ+ Sbjct: 1032 SGKLIVLREVLRVWKAEGRRVLLFAQTVQMLDILQRFLETCDPSVPSSSSSAPSSTLGGK 1091 Query: 87 ------AFPQGRTLDKDPCTIQEWNEGK-IPLLFAHPASCGHGLNLQYGGNILVFFSLWW 139 G + + + I L G GLNL + +V F W Sbjct: 1092 KGFSFLRLDGGVPVASRHAIVDSFQRDSSIFALLLTTRVGGVGLNLT-AADRVVIFDPDW 1150 Query: 140 DLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + Q ER + G + V +Y L+ +++E V R K + +L Sbjct: 1151 NPMTDMQARERSW-----RIGQSKDVCIYRLLTSGSVEEKVYHRQVFKFFLSQKVLQ 1202 >gi|297304199|ref|XP_001099671.2| PREDICTED: transcriptional regulator ATRX isoform 2 [Macaca mulatta] Length = 2338 Score = 77.3 bits (189), Expect = 1e-12, Method: Composition-based stats. Identities = 33/202 (16%), Positives = 71/202 (35%), Gaps = 27/202 (13%) Query: 9 RELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIE---- 64 ++ D E +E + L++A ++ + +E +E Sbjct: 1849 KDFVTDADAEVLEHSGKMVLLFEILRMAEE---IGDKVLVFSQSLISLDLIEDFLELASR 1905 Query: 65 ---KANAAPIIVAYHFNSDLARLQ----KAFPQGRTLDKDPCTIQEWNEGKI---PLLFA 114 + P+I + + L+ T +E+N+ L Sbjct: 1906 EKTEDKDKPLI----YKGEGKWLRNIDYYRLDGSTTAQSRKKWAEEFNDETNVRGRLFII 1961 Query: 115 HPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQN 174 + G+NL N ++ F W+ Q I R+ + G + V+VY +AQ Sbjct: 1962 STKAGSLGINL-VAANRVIIFDASWNPSYDIQSIFRV-----YRFGQTKPVYVYRFLAQG 2015 Query: 175 TIDELVLQRLRTKSTIQDLLLN 196 T+++ + R TK ++ +++ Sbjct: 2016 TMEDKIYDRQVTKQSLSFRVVD 2037 >gi|74007791|ref|XP_860168.1| PREDICTED: similar to transcriptional regulator ATRX isoform 1 isoform 7 [Canis familiaris] Length = 2433 Score = 77.3 bits (189), Expect = 1e-12, Method: Composition-based stats. Identities = 33/202 (16%), Positives = 71/202 (35%), Gaps = 27/202 (13%) Query: 9 RELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIE---- 64 ++ D E +E + L++A ++ + +E +E Sbjct: 1944 KDFVTDADAEILEHSGKMVLLFEILRMAEE---IGDKVLVFSQSLISLDLIEDFLELASR 2000 Query: 65 ---KANAAPIIVAYHFNSDLARLQ----KAFPQGRTLDKDPCTIQEWNEGKI---PLLFA 114 + P+I + + L+ T +E+N+ L Sbjct: 2001 EKTEDKDKPLI----YKGEGKWLRNIDYYRLDGSTTAQSRKKWAEEFNDETNVRGRLFII 2056 Query: 115 HPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQN 174 + G+NL N ++ F W+ Q I R+ + G + V+VY +AQ Sbjct: 2057 STKAGSLGINL-VAANRVIIFDASWNPSYDIQSIFRV-----YRFGQTKPVYVYRFLAQG 2110 Query: 175 TIDELVLQRLRTKSTIQDLLLN 196 T+++ + R TK ++ +++ Sbjct: 2111 TMEDKIYDRQVTKQSLSFRVVD 2132 >gi|15320696|ref|NP_203208.1| GTA [Epiphyas postvittana NPV] gi|15213164|gb|AAK85603.1| GTA [Epiphyas postvittana NPV] Length = 501 Score = 77.3 bits (189), Expect = 1e-12, Method: Composition-based stats. Identities = 35/213 (16%), Positives = 75/213 (35%), Gaps = 32/213 (15%) Query: 10 ELYCDLQGENIEAFN-SASKTVKCLQLANGAVYYD------------EEKHWKEVHDEKI 56 ++ + G+++ + S + Q+ E + + Sbjct: 280 DVAVETDGKDLNSMQDVLSLLCRLRQMCCHPALTKCAHMFESHANIFEPTYASSKCQRVL 339 Query: 57 KALEVIIEKANAAPIIVAYH--FNSDLARLQKAFPQGRTLDKDPCTIQE-------WNEG 107 + ++ ++ N ++V+ F +A L + L ++E +N Sbjct: 340 ELIQQVLNTDNDKIVLVSQWVEFLHIIAALLRRHEILILLYTGKQRVEERIAVENQFNAA 399 Query: 108 KIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 P +L G GLNL GGN +V W+ + Q RI + G K+ Sbjct: 400 NSPYRVLLMSIKCGGVGLNL-IGGNHIVVLEPHWNPQIELQAQNRI-----HRLGQKKQT 453 Query: 166 FVYYLI--AQNTIDELVLQRLRTKSTIQDLLLN 196 +VY ++ N+++ + R K T + + + Sbjct: 454 YVYKMLHDEDNSVERYMKTRQDNKLTFVNKVFD 486 >gi|325848756|ref|ZP_08170266.1| SNF2 family N-terminal domain protein [Anaerococcus hydrogenalis ACS-025-V-Sch4] gi|325480400|gb|EGC83462.1| SNF2 family N-terminal domain protein [Anaerococcus hydrogenalis ACS-025-V-Sch4] Length = 478 Score = 77.3 bits (189), Expect = 1e-12, Method: Composition-based stats. Identities = 37/202 (18%), Positives = 72/202 (35%), Gaps = 28/202 (13%) Query: 18 ENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEK--------IKALEVIIEKANAA 69 + + + G +Y +K + K +KA IIE+ Sbjct: 250 NDWKPETIYRLFNILQGITAGFIYNMTDKGYIYKTGYKDTPETNYRLKAFMDIIEEFQGK 309 Query: 70 PIIVAYHFNSDLARLQKAFPQ------GRTLDKDPCT------IQEWNEGKIPLLFAHPA 117 +IV + + + + D T I+ + G L A+ + Sbjct: 310 -VIVYCQYQIEAKTIVDLLNKNYGENSAVLFDGTINTKQRNLNIERFRNGS-RFLVANKS 367 Query: 118 SCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 G LNLQ+ N +++++ WD +Q +RI + G + + +I T++ Sbjct: 368 CAGFSLNLQF-CNQIIYYNNDWDYGTREQSEDRIN-----RIGQEYKCYYLDIICAGTVE 421 Query: 178 ELVLQRLRTKSTIQDLLLNALK 199 E ++ L K + + L LK Sbjct: 422 EYIMDCLSKKEALGNRFLKELK 443 >gi|298705202|emb|CBJ28633.1| SNF2 helicase [Ectocarpus siliculosus] Length = 2420 Score = 77.3 bits (189), Expect = 1e-12, Method: Composition-based stats. Identities = 27/147 (18%), Positives = 56/147 (38%), Gaps = 15/147 (10%) Query: 54 EKIKALE-VIIEKANAAPIIVAYHFNSDLARLQKAFPQGRT-------LDKDPCTIQEWN 105 KI AL I+ + +V ++ L ++ AF + ++ ++ + Sbjct: 2106 TKITALVGDILALGPSDKCLVFSQWDDMLDIVELAFKENGVSYARMKGKNRSELALEAFR 2165 Query: 106 -EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA 164 EG L + HGLNL N + + Q + R+ + G R Sbjct: 2166 AEGGPRALMLPIKTGSHGLNLVE-ANHVFLLEPLLNAAVEAQAVNRV-----HRGGQTRP 2219 Query: 165 VFVYYLIAQNTIDELVLQRLRTKSTIQ 191 ++ I + TI+E + + + K+++ Sbjct: 2220 TTIHRFIVRGTIEEDIERLRKKKTSLA 2246 >gi|281210112|gb|EFA84280.1| hypothetical protein PPL_03357 [Polysphondylium pallidum PN500] Length = 1494 Score = 77.3 bits (189), Expect = 1e-12, Method: Composition-based stats. Identities = 31/150 (20%), Positives = 60/150 (40%), Gaps = 18/150 (12%) Query: 67 NAAPIIVAYHFNSDLARLQKAFP---------QGRTLDKDPCT--IQEWNEGKIPLLFAH 115 +V H L L+++ G T + T + N K + Sbjct: 892 ENKKFLVFAHHTDILDGLERSIKSTGTGYMRIDGSTPAEARQTYVTRFQNSDKCRVALLS 951 Query: 116 PASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNT 175 + G GL L +++VF L+W +Q +R+ + G + V ++YLI +NT Sbjct: 952 ITAAGTGLTLT-ASSLVVFVELYWTPGVLRQAEDRV-----HRIGQREDVHIHYLIGKNT 1005 Query: 176 IDELVLQRLRTKSTIQDLLLNALKKETIHV 205 +D+ + + K + L+ ++E +H Sbjct: 1006 LDDKMWPTICNKLEVLGETLDG-QEEILHT 1034 >gi|120603977|ref|YP_968377.1| SNF2-related protein [Desulfovibrio vulgaris DP4] gi|120564206|gb|ABM29950.1| SNF2-related protein [Desulfovibrio vulgaris DP4] Length = 1131 Score = 77.3 bits (189), Expect = 1e-12, Method: Composition-based stats. Identities = 28/159 (17%), Positives = 54/159 (33%), Gaps = 27/159 (16%) Query: 56 IKALEVIIEKANAAPIIVAYHFNSD----LARLQKAFPQGRTL--------DKDPCTIQE 103 + L I ++ +V LQ+ F + L K + Sbjct: 806 FELLTDI--RSKGEKALVFVEVKHMQMILAELLQQRFDCEQVLIINGEVSGPKRQERVHA 863 Query: 104 WNEGK-IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFK 162 + K + P + G GL L + ++ + WW+ Q +R + G + Sbjct: 864 FQTRKGFDAILLSPKAAGVGLTLTAATH-VIHLNRWWNPAVEDQCTDR-----AYRIGQQ 917 Query: 163 RAVFVYYLIAQN------TIDELVLQRLRTKSTIQDLLL 195 V V+Y +A + + D + + L K ++ LL Sbjct: 918 HDVTVHYPMAIHPQLGDASFDVKLHELLERKRSLSRDLL 956 >gi|74007789|ref|XP_860124.1| PREDICTED: similar to transcriptional regulator ATRX isoform 2 isoform 6 [Canis familiaris] Length = 2395 Score = 77.3 bits (189), Expect = 1e-12, Method: Composition-based stats. Identities = 33/202 (16%), Positives = 71/202 (35%), Gaps = 27/202 (13%) Query: 9 RELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIE---- 64 ++ D E +E + L++A ++ + +E +E Sbjct: 1906 KDFVTDADAEILEHSGKMVLLFEILRMAEE---IGDKVLVFSQSLISLDLIEDFLELASR 1962 Query: 65 ---KANAAPIIVAYHFNSDLARLQ----KAFPQGRTLDKDPCTIQEWNEGKI---PLLFA 114 + P+I + + L+ T +E+N+ L Sbjct: 1963 EKTEDKDKPLI----YKGEGKWLRNIDYYRLDGSTTAQSRKKWAEEFNDETNVRGRLFII 2018 Query: 115 HPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQN 174 + G+NL N ++ F W+ Q I R+ + G + V+VY +AQ Sbjct: 2019 STKAGSLGINL-VAANRVIIFDASWNPSYDIQSIFRV-----YRFGQTKPVYVYRFLAQG 2072 Query: 175 TIDELVLQRLRTKSTIQDLLLN 196 T+++ + R TK ++ +++ Sbjct: 2073 TMEDKIYDRQVTKQSLSFRVVD 2094 >gi|295695376|ref|YP_003588614.1| helicase domain protein [Bacillus tusciae DSM 2912] gi|295410978|gb|ADG05470.1| helicase domain protein [Bacillus tusciae DSM 2912] Length = 572 Score = 77.3 bits (189), Expect = 1e-12, Method: Composition-based stats. Identities = 30/151 (19%), Positives = 66/151 (43%), Gaps = 17/151 (11%) Query: 54 EKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRT-----LDKDPCTIQEWNEG- 107 K++ ++ + + +IV + + L + ++W + Sbjct: 363 TKVETTIDLVNQIHDK-VIVFTEYRASQDFLLYMMKRRGIPAVPFRGGFQRGKKDWMKDI 421 Query: 108 ---KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA 164 + ++ A + G GLNLQ+ N ++ F L W+ +Q I RI + G R Sbjct: 422 FSKRAQVMVA-TEAGGEGLNLQF-CNQIINFDLPWNPMRVEQRIGRI-----HRLGQTRD 474 Query: 165 VFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 VF++ L +TI++ +++ L+ K + +L++ Sbjct: 475 VFIHNLATADTIEQYIVELLQEKIRLFELVI 505 >gi|320032945|gb|EFW14895.1| SNF2 family helicase/ATPase [Coccidioides posadasii str. Silveira] Length = 1057 Score = 76.9 bits (188), Expect = 1e-12, Method: Composition-based stats. Identities = 31/178 (17%), Positives = 65/178 (36%), Gaps = 28/178 (15%) Query: 50 EVHDEKIKALEV----IIEKANAAP------IIVAYHFNSDLARLQ-----------KAF 88 E K KAL +E++ P +V + S L ++ Sbjct: 873 EGPHTKTKALISHLLGTVEESKHKPDQPPIKSVVFSSWTSHLDLIEIALQDNGIRGFTRL 932 Query: 89 PQGRTLDKDPCTIQEWNEGK-IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQM 147 L + + ++ + + I +L A + G GLNL + + ++ Q Sbjct: 933 DGTMALKQRNVALDKFRDDENITVLLATLGAGGVGLNLTSASRVYIM-EPQYNPAAVAQA 991 Query: 148 IERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIHV 205 ++R+ + G R V I + +I+E + + + K + ++ LN K + + Sbjct: 992 VDRV-----HRLGQTREVTTVQFIMKESIEEKIAELAKKKQKLANMSLNRGKSDKREM 1044 >gi|238588586|ref|XP_002391769.1| hypothetical protein MPER_08754 [Moniliophthora perniciosa FA553] gi|215456891|gb|EEB92699.1| hypothetical protein MPER_08754 [Moniliophthora perniciosa FA553] Length = 311 Score = 76.9 bits (188), Expect = 1e-12, Method: Composition-based stats. Identities = 31/151 (20%), Positives = 59/151 (39%), Gaps = 15/151 (9%) Query: 51 VHDEKIKAL-EVIIEKANAAP-------IIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQ 102 + K+KA+ E I A P + +A + ++ L + K ++ Sbjct: 149 LPSTKMKAMMEEITRLAKDKPDEKWTGCLSLASDYLTEYGILHVKYQGDMNRVKRDQAVR 208 Query: 103 EW-NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGF 161 + ++ K P++ G GLNL N ++ L W Q +E R + G Sbjct: 209 VFMSKDKAPIMLMSMKCGGVGLNLTRANN-VISLDLGWS-----QAVENQAFDRVHRLGQ 262 Query: 162 KRAVFVYYLIAQNTIDELVLQRLRTKSTIQD 192 R V + + +NT+++ +L K + D Sbjct: 263 TRTVNIKRFVIKNTVEDRILVLQDRKQQLAD 293 >gi|303322649|ref|XP_003071316.1| SNF2 family N-terminal domain containing protein [Coccidioides posadasii C735 delta SOWgp] gi|240111018|gb|EER29171.1| SNF2 family N-terminal domain containing protein [Coccidioides posadasii C735 delta SOWgp] Length = 1057 Score = 76.9 bits (188), Expect = 1e-12, Method: Composition-based stats. Identities = 32/178 (17%), Positives = 66/178 (37%), Gaps = 28/178 (15%) Query: 50 EVHDEKIKALEV----IIEKANAAP------IIVAYHFNSDLARLQKAFPQGRT------ 93 E K KAL +E++ P +V + S L ++ A Sbjct: 873 EGPHTKTKALISHLLGTVEESKHKPDQPPIKSVVFSSWTSHLDLIEIALQDNGIRGFTRL 932 Query: 94 -----LDKDPCTIQEWNEGK-IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQM 147 L + + ++ + + I +L A + G GLNL + + ++ Q Sbjct: 933 DGTMALKQRNVALDKFRDDENITVLLATLGAGGVGLNLTSASRVYIM-EPQYNPAAVAQA 991 Query: 148 IERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIHV 205 ++R+ + G R V I + +I+E + + + K + ++ LN K + + Sbjct: 992 VDRV-----HRLGQTREVTTVQFIMKESIEEKIAELAKKKQKLANMSLNRGKSDKREM 1044 >gi|297835518|ref|XP_002885641.1| hypothetical protein ARALYDRAFT_342596 [Arabidopsis lyrata subsp. lyrata] gi|297331481|gb|EFH61900.1| hypothetical protein ARALYDRAFT_342596 [Arabidopsis lyrata subsp. lyrata] Length = 1122 Score = 76.9 bits (188), Expect = 1e-12, Method: Composition-based stats. Identities = 33/154 (21%), Positives = 67/154 (43%), Gaps = 15/154 (9%) Query: 46 KHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWN 105 K V+ + I L++I+E+ + +V + + + D+ I +N Sbjct: 933 KEKVLVYSQYIDTLKLIMEQLS----LVFSWK--EGEEILFMHGKVEQRDRQ-HLIDNFN 985 Query: 106 EGKI--PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKR 163 + +L A +C G++L G + +V + W+ Q I R + G KR Sbjct: 986 KPDSGSKVLLASTKACSEGISL-VGASRVVILDVVWNPSVESQAISR-----AFRLGQKR 1039 Query: 164 AVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 AVF+Y+L+ ++T + + K I +L+ ++ Sbjct: 1040 AVFIYHLMVKDTSEWNKYCKQSEKHRISELVFSS 1073 >gi|170585925|ref|XP_001897732.1| SNF2 family N-terminal domain containing protein [Brugia malayi] gi|158594834|gb|EDP33412.1| SNF2 family N-terminal domain containing protein [Brugia malayi] Length = 1150 Score = 76.9 bits (188), Expect = 1e-12, Method: Composition-based stats. Identities = 41/205 (20%), Positives = 73/205 (35%), Gaps = 32/205 (15%) Query: 18 ENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVH-----DEKIKALEVIIEKAN--AAP 70 NI + + T K L D K +++ KIK L ++ A Sbjct: 890 SNISLLDEKALTEKLL-------GEDGNKQMEQLFQKTFISTKIKKLFEQVDYALSCGDK 942 Query: 71 IIVAYHFNSDLARLQKAFPQGRTL----DKDPCTIQEWNEGKIP--------LLFAHPAS 118 ++ + S L L+ + + L + + N ++ + Sbjct: 943 CVIVSQWTSLLNILEYHLERKKILYTSINGKVSSSDRQNRANSFNMMDSGPHVMLLSL-T 1001 Query: 119 CGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDE 178 G GGN L L W+ QQ +RI + G + VF++ L+ TI+E Sbjct: 1002 AGGVGLNLVGGNHLFLVDLHWNPALEQQACDRI-----YRIGQTKNVFIHKLVCLETIEE 1056 Query: 179 LVLQRLRTKSTIQDLLLNALKKETI 203 VL R K T+ +L+ + + + Sbjct: 1057 RVLALQRIKQTLAKDVLDGVASKKL 1081 >gi|159480254|ref|XP_001698199.1| SNF2 superfamily protein [Chlamydomonas reinhardtii] gi|158273697|gb|EDO99484.1| SNF2 superfamily protein [Chlamydomonas reinhardtii] Length = 797 Score = 76.9 bits (188), Expect = 1e-12, Method: Composition-based stats. Identities = 22/155 (14%), Positives = 53/155 (34%), Gaps = 32/155 (20%) Query: 67 NAAPIIVAYHFNSDLARLQ--------KAFPQGRTLDKDP-----CTIQEWNEGK----- 108 +++ + L + P R P I ++ G+ Sbjct: 560 GGHRVLIFSQVSQMTEMLNVLEAYLEDRGIPAARLDGSVPWQQRMTDIADFQVGQSGTAA 619 Query: 109 -IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ-------MIERIGVTRQRQAG 160 + + G G+NL + ++ + W+ + Q ++R + G Sbjct: 620 AKDVFLLSTRAGGLGINLT-AADTVIIYDSDWNPHQDSQHPPPPPQAMDRC-----HRIG 673 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 R V V+ L+ N++ +L R +K ++ +++ Sbjct: 674 QSRPVLVFRLVTANSVGCRMLARAESKKALERIVI 708 >gi|123407009|ref|XP_001302911.1| SNF2 family N-terminal domain containing protein [Trichomonas vaginalis G3] gi|121884245|gb|EAX89981.1| SNF2 family N-terminal domain containing protein [Trichomonas vaginalis G3] Length = 2169 Score = 76.9 bits (188), Expect = 1e-12, Method: Composition-based stats. Identities = 25/145 (17%), Positives = 50/145 (34%), Gaps = 18/145 (12%) Query: 67 NAAPIIVAYHFNSDLARLQKA---------FPQGRTLDKDPC-TIQEW--NEGKIPLLFA 114 +++ L L++ G +++ I ++ N G + Sbjct: 567 QGRSVLIFSQKVKVLKLLEEYCQLKRYTYEILNGNLSEQEKKEAISKFCDNSGDAFIFLI 626 Query: 115 HPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQN 174 S GLNL N+ + F W+ + Q + R + G + V V L+ Sbjct: 627 STRSGAEGLNLTR-ANVTIVFDPDWNPQNDIQALGRC-----HRIGQTQKVDVIRLLTFG 680 Query: 175 TIDELVLQRLRTKSTIQDLLLNALK 199 T + + R + K + + +L K Sbjct: 681 TYEHEMYIRSQRKLKLWNSILGDGK 705 >gi|328849333|gb|EGF98516.1| hypothetical protein MELLADRAFT_95635 [Melampsora larici-populina 98AG31] Length = 177 Score = 76.9 bits (188), Expect = 1e-12, Method: Composition-based stats. Identities = 14/111 (12%), Positives = 44/111 (39%), Gaps = 6/111 (5%) Query: 85 QKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEH 144 ++ T ++ + + + G GLN+ + + W+ + Sbjct: 36 RQLHGDQSTFERTSQLNSFTKDPNVEAFVVSIEAGGVGLNMTC-ADEVYLMDAHWNPQVV 94 Query: 145 QQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 QQ ++R+ + G + V V++++ +I++ + + K+ + ++ Sbjct: 95 QQAVDRL-----HRIGQAKPVRVFHVVTGQSIEQHLYNVQKRKAALAKRVI 140 >gi|307176622|gb|EFN66090.1| Transcriptional regulator ATRX [Camponotus floridanus] Length = 2405 Score = 76.9 bits (188), Expect = 1e-12, Method: Composition-based stats. Identities = 21/86 (24%), Positives = 39/86 (45%), Gaps = 6/86 (6%) Query: 111 LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYL 170 L + G G+NL N ++ F W+ Q I RI + G K+ ++Y Sbjct: 2038 LFLISTRAGGLGINLT-AANRVIIFDASWNPSHDVQSIFRI-----YRFGQKKPCYIYRF 2091 Query: 171 IAQNTIDELVLQRLRTKSTIQDLLLN 196 +A T++E + R TK ++ +++ Sbjct: 2092 LAAGTMEEKIYNRQVTKLSLSCRVVD 2117 >gi|68075977|ref|XP_679908.1| hypothetical protein [Plasmodium berghei strain ANKA] gi|56500750|emb|CAH98546.1| conserved hypothetical protein [Plasmodium berghei] Length = 528 Score = 76.9 bits (188), Expect = 1e-12, Method: Composition-based stats. Identities = 21/90 (23%), Positives = 39/90 (43%), Gaps = 6/90 (6%) Query: 93 TLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIG 152 T+++ + + + + G GLNL N ++ W+ +R Sbjct: 445 TIERQQIIKEFSENDNVFIFLLSTKAGGVGLNL-IAANHVILMDQDWNPH-----NDRQA 498 Query: 153 VTRQRQAGFKRAVFVYYLIAQNTIDELVLQ 182 R + G K+ V++Y L +NTI+E VL+ Sbjct: 499 EDRVHRLGQKKEVYIYRLCCKNTIEETVLK 528 >gi|156101331|ref|XP_001616359.1| helicase [Plasmodium vivax SaI-1] gi|148805233|gb|EDL46632.1| helicase, putative [Plasmodium vivax] Length = 877 Score = 76.9 bits (188), Expect = 2e-12, Method: Composition-based stats. Identities = 42/186 (22%), Positives = 74/186 (39%), Gaps = 26/186 (13%) Query: 34 QLANGAVYYDEEKHWKEVHD------EKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQ 85 Q A+G +E++ H K+KA++ I ++ H + + Sbjct: 590 QTASGIPNRGDEENVSISHLFKMTGYAKVKAIKEYITYLIDADIKFLLFCHHKLVMDEID 649 Query: 86 KAFPQGRT----------LDKDPCTIQEWNEGK-IPLLFAHPASCGHGLNLQYGGNILVF 134 + +T ++K I+ + + + +CG GLNL N +VF Sbjct: 650 DFLREKKTMFIRVDGLTPIEKREVYIKSFQNDDHVKIALLSLTACGIGLNLT-AANTVVF 708 Query: 135 FSLWWDLEEHQQMIERIGVTRQRQAGFKRAVF-VYYLIAQNTIDELVLQRLRTKSTIQDL 193 L+W + Q +R + G V ++YLIAQNTIDE+V + + K Sbjct: 709 GELYWVPGQIIQAEDR-----AHRIGTTHEVVNIHYLIAQNTIDEIVWKIINRKWNTLTT 763 Query: 194 LLNALK 199 LN ++ Sbjct: 764 ALNGME 769 >gi|282852065|ref|ZP_06261423.1| SNF2 family N-terminal domain protein [Lactobacillus gasseri 224-1] gi|282556825|gb|EFB62429.1| SNF2 family N-terminal domain protein [Lactobacillus gasseri 224-1] Length = 424 Score = 76.9 bits (188), Expect = 2e-12, Method: Composition-based stats. Identities = 31/153 (20%), Positives = 60/153 (39%), Gaps = 18/153 (11%) Query: 52 HDEKIKALEVIIEKANA--APIIVAYHFNSDLARLQKA---FPQGRTL------DKDPCT 100 +KI+ + I ++ +IV F + + +L K F + ++ Sbjct: 229 DSQKIEQIINICVDSHENSEKVIVFSFFKNYVLKLLKKKLPFLADDIISGDLSSNQRQEV 288 Query: 101 IQEW-NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQA 159 I ++ +L + G GLN+Q N ++ W Q I R + Sbjct: 289 IDKFSENPNQNVLLVQIDAGGFGLNIQ-AANRVILCEPQWKPSTENQAISR-----AYRM 342 Query: 160 GFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQD 192 G R V VY L+ + ++DE +++ + K I + Sbjct: 343 GQNRNVMVYRLLTKESVDETMMEIIHEKEDIFN 375 >gi|302680130|ref|XP_003029747.1| hypothetical protein SCHCODRAFT_58967 [Schizophyllum commune H4-8] gi|300103437|gb|EFI94844.1| hypothetical protein SCHCODRAFT_58967 [Schizophyllum commune H4-8] Length = 939 Score = 76.9 bits (188), Expect = 2e-12, Method: Composition-based stats. Identities = 32/165 (19%), Positives = 57/165 (34%), Gaps = 36/165 (21%) Query: 43 DEEKHWKEVHDEKIKALEVIIEKANAA-PIIVAYHFNSDLA-----RLQKAFPQGRTL-- 94 ++ + KI L +++ A +V F S L R + P R Sbjct: 783 EDRTGIRAGSSAKIDQLVKLLQLNPPADKSLVFSQFTSFLDKVSCQRWMRCIPYVRFDGQ 842 Query: 95 ---DKDPCTIQEWNEGKIP----------------LLFAHPASCGHGLNLQYGGNILVFF 135 + I+ ++ P ++ + GLNL N+ Sbjct: 843 MSGKRREEAIRRFSVPIKPTDTAASNWLPGGVNPKVMLISLKAGALGLNLTVANNVY--- 899 Query: 136 SLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELV 180 LWW Q I+R+ + G + V VY +IA++T++ V Sbjct: 900 -LWWQEGIESQAIDRVN-----RIGQTKPVHVYQMIAEDTVESKV 938 >gi|167757932|ref|ZP_02430059.1| hypothetical protein CLOSCI_00267 [Clostridium scindens ATCC 35704] gi|167664364|gb|EDS08494.1| hypothetical protein CLOSCI_00267 [Clostridium scindens ATCC 35704] Length = 470 Score = 76.9 bits (188), Expect = 2e-12, Method: Composition-based stats. Identities = 35/149 (23%), Positives = 67/149 (44%), Gaps = 16/149 (10%) Query: 52 HDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLD------KDPCTIQEWN 105 + +IK L I+ + I+ + S++ ++ + P D K ++ + Sbjct: 291 DNPRIKMLMNILAE---EKTIIFCRYESEIEQICRIIPGAVRFDGKVPQRKRDIALRRF- 346 Query: 106 EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 G L A+ G LNLQ+ + +++ S WDL + Q +R+ + G V Sbjct: 347 AGDSDYLIANRNCAGFSLNLQF-CHNIIYMSNDWDLGKRMQSEDRV-----HRLGQGHDV 400 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 ++ + A+NTIDE +L+ L K I + + Sbjct: 401 YITDICAENTIDEQILKCLSRKENILECI 429 >gi|115384256|ref|XP_001208675.1| conserved hypothetical protein [Aspergillus terreus NIH2624] gi|114196367|gb|EAU38067.1| conserved hypothetical protein [Aspergillus terreus NIH2624] Length = 1181 Score = 76.9 bits (188), Expect = 2e-12, Method: Composition-based stats. Identities = 30/157 (19%), Positives = 59/157 (37%), Gaps = 20/157 (12%) Query: 63 IEKANAAPI--IVAYHFNSDLARLQKAFPQGRT-----------LDKDPCTIQEWNEGK- 108 ++ A P+ +V + S L ++ A L + E++ Sbjct: 1018 LQAAGERPLKSVVFSAWTSHLDLIEIALKDNGLTGYTRLDGTMALAARNKALAEFHSNDT 1077 Query: 109 IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVY 168 I +L A + G GLNL + + ++ Q I+R+ + G R V Sbjct: 1078 ITVLLATIGAGGVGLNLTAASKVYIM-EPQYNPAAVAQAIDRV-----HRIGQTREVTTV 1131 Query: 169 YLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIHV 205 + + +I+E + + + K + DL +N K + V Sbjct: 1132 QYLMKGSIEEKIFELAKKKQQLADLSMNRGKLDKKEV 1168 >gi|317126457|ref|YP_004100569.1| helicase [Intrasporangium calvum DSM 43043] gi|315590545|gb|ADU49842.1| helicase domain protein [Intrasporangium calvum DSM 43043] Length = 726 Score = 76.9 bits (188), Expect = 2e-12, Method: Composition-based stats. Identities = 20/107 (18%), Positives = 45/107 (42%), Gaps = 7/107 (6%) Query: 92 RTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 +T + + + + ++ + + G G+NL + + +V L W E QQ I+R Sbjct: 601 QTAKQRQEAVDAFQKDPEVSVAVCSLLAAGVGVNL-HASSNVVLSELSWTAAEQQQAIDR 659 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + + G V + ++A T+D + + + K + L+ Sbjct: 660 V-----HRIGQDEPVTAWRILAAGTVDSRIAELIDAKQGLAARALDG 701 >gi|331226481|ref|XP_003325910.1| DNA repair protein RAD5 [Puccinia graminis f. sp. tritici CRL 75-36-700-3] gi|309304900|gb|EFP81491.1| DNA repair protein RAD5 [Puccinia graminis f. sp. tritici CRL 75-36-700-3] Length = 1449 Score = 76.9 bits (188), Expect = 2e-12, Method: Composition-based stats. Identities = 22/133 (16%), Positives = 51/133 (38%), Gaps = 17/133 (12%) Query: 72 IVAYHFNSDLARLQKAFP----QGRTLDKDPCTIQEWN-------EGKIPLLFAHPASCG 120 +V + L ++ AF Q + LD + + K +L + G Sbjct: 1293 VVFSQWTKLLDKIASAFDEFNIQYKKLDGTMSRAERNRSMEALKADPKCEVLLVSLRAGG 1352 Query: 121 HGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELV 180 GLNL + +W+ Q ++R+ + G + V + I ++++ + Sbjct: 1353 VGLNLTC-AQRVYLMEPFWNPAVENQAVDRV-----HRLGQTKPVRMIRYIISGSVEQNM 1406 Query: 181 LQRLRTKSTIQDL 193 L+ + K+ + ++ Sbjct: 1407 LEIQKRKTELANM 1419 >gi|294933433|ref|XP_002780713.1| DNA helicase, putative [Perkinsus marinus ATCC 50983] gi|239890749|gb|EER12508.1| DNA helicase, putative [Perkinsus marinus ATCC 50983] Length = 318 Score = 76.9 bits (188), Expect = 2e-12, Method: Composition-based stats. Identities = 36/174 (20%), Positives = 70/174 (40%), Gaps = 30/174 (17%) Query: 48 WKEVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQKAFPQGRTLD---------- 95 W++ + KI A++ ++ N ++V H S L +L++ + Sbjct: 91 WRKTGEAKIGAVKDYLDYLLDNDCKMLVFAHHRSMLDKLEEKVEGILHIKGSSAGKNFGL 150 Query: 96 ----------KDPCTIQEWNEGK-IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEH 144 K P ++++ E I + +C GL L +++VF L+W Sbjct: 151 IRIDGQTPQTKRPELVKKFQEDDDIRVAVLSITACSEGLTLT-AASVVVFAELYWVPGTI 209 Query: 145 QQMIERIGVTRQRQAGFKRAVF-VYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 +Q R+ + G ++ ++YLIA+ + DE V L+ K +LN Sbjct: 210 EQAEARV-----HRIGQTKSCVDIHYLIARGSPDEAVYACLKRKKEDTSAILNG 258 >gi|28278071|gb|AAH39796.1| Hltf protein [Mus musculus] Length = 163 Score = 76.9 bits (188), Expect = 2e-12, Method: Composition-based stats. Identities = 24/144 (16%), Positives = 51/144 (35%), Gaps = 19/144 (13%) Query: 72 IVAYHFNSDLARLQKAFPQGRTL----------DKDPCTIQEWNE---GKIPLLFAHPAS 118 +V F + L+ ++ + K +IQ + G ++ + Sbjct: 9 LVVSQFTTFLSLIETPLKASGFVFTRLDGSMAQKKRVESIQRFQNTEAGSPTIMLLSLKA 68 Query: 119 CGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDE 178 G GLNL + + W+ Q +R + G K+ V + I +++++E Sbjct: 69 GGVGLNL-CAASRVFLMDPAWNPAAEDQCFDRC-----HRLGQKQEVIITKFIVKDSVEE 122 Query: 179 LVLQRLRTKSTIQDLLLNALKKET 202 +L+ TK + K + Sbjct: 123 NMLKIQNTKRDLAAGAFGTKKTDA 146 >gi|322830276|gb|EFZ33358.1| DNA excision repair protein, putative [Trypanosoma cruzi] Length = 1114 Score = 76.9 bits (188), Expect = 2e-12, Method: Composition-based stats. Identities = 32/198 (16%), Positives = 68/198 (34%), Gaps = 22/198 (11%) Query: 10 ELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIE--KAN 67 E + + + + + + +K + ++ + K++ L+ ++ + Sbjct: 760 EYFDNDEEDETDGVDGKTKRRRGSHMS-----LRSNRLVNYSGSGKLQTLQKLLTVWQRG 814 Query: 68 AAPIIVAYHFNSDLARLQKAFPQGRTL----------DKDPCTIQEWNEGKIPLLFAHPA 117 ++V L ++ Q + +NE + Sbjct: 815 GQRVLVFSQTRMALDIIENMCEQEGFKYIRMDGSTSGHHRQELMDRFNEDDSIVAALLTT 874 Query: 118 SCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 G G N +V F W+ +Q ER + G R V VY LIA T++ Sbjct: 875 RVGGVGVNLVGANRVVLFDPDWNPVTDEQARERAW-----RIGQTRDVGVYRLIASGTVE 929 Query: 178 ELVLQRLRTKSTIQDLLL 195 E +L+R K+ + + +L Sbjct: 930 EAILRRQLAKTYVTEKVL 947 >gi|322788045|gb|EFZ13883.1| hypothetical protein SINV_02167 [Solenopsis invicta] Length = 159 Score = 76.9 bits (188), Expect = 2e-12, Method: Composition-based stats. Identities = 25/104 (24%), Positives = 39/104 (37%), Gaps = 13/104 (12%) Query: 87 AFPQGRTLDKDPCTIQEWNE---GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEE 143 T+ + TI ++N + G G+NL G N ++ + W+ Sbjct: 18 RMDGTTTMSQRQQTIHKFNNVHDTSYFVFLLTTRVGGLGVNLT-GANRVIIYDPDWNPAT 76 Query: 144 HQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTK 187 Q ER + G + V Y LI TI+E +L L K Sbjct: 77 DAQAKERAW-----RIGQNKQV--YRLITAGTIEEKLL--LSNK 111 >gi|148273304|ref|YP_001222865.1| putative DNA helicase [Clavibacter michiganensis subsp. michiganensis NCPPB 382] gi|147831234|emb|CAN02189.1| putative DNA helicase [Clavibacter michiganensis subsp. michiganensis NCPPB 382] Length = 711 Score = 76.9 bits (188), Expect = 2e-12, Method: Composition-based stats. Identities = 24/95 (25%), Positives = 44/95 (46%), Gaps = 6/95 (6%) Query: 103 EWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFK 162 N+ ++ ++ + G GLNLQ N +V L W E Q I+R+ + G + Sbjct: 596 FQNDPEVKVVVCSLTAAGVGLNLQAASN-VVLAELSWTSAEQTQAIDRV-----HRIGQE 649 Query: 163 RAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 V + +IA TID + + + +K+ + L+ Sbjct: 650 EPVTAWRIIAAQTIDAKIAELIDSKAGLAARALDG 684 >gi|115438126|ref|XP_001217986.1| predicted protein [Aspergillus terreus NIH2624] gi|114188801|gb|EAU30501.1| predicted protein [Aspergillus terreus NIH2624] Length = 1735 Score = 76.9 bits (188), Expect = 2e-12, Method: Composition-based stats. Identities = 27/151 (17%), Positives = 61/151 (40%), Gaps = 19/151 (12%) Query: 59 LEVIIEKA--NAAPIIVAYHFNSDLARL---------QKAFPQGRT--LDKDPCTIQEWN 105 L+ II+K+ ++V H L + + G+T + + T + Sbjct: 1344 LDKIIDKSVRAGDKVLVFSHTLPTLDYIEHVLQQSNRKYCRLDGKTPVVSRQAATKKFNT 1403 Query: 106 EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 + + + + G GLN+ G N ++ + + +Q I R + G + V Sbjct: 1404 DANLEVYLISTRAGGLGLNI-PGANRVIIYDFSFSPFWEEQAIGR-----AYRLGQVKPV 1457 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 +VY I+ T +E++ + K+ + +++ Sbjct: 1458 YVYRFISGGTFEEVMYNKALFKTQLAHRVVD 1488 >gi|60544834|gb|AAX22755.1| SWI2/SNF2-like protein [Arabidopsis thaliana] Length = 698 Score = 76.9 bits (188), Expect = 2e-12, Method: Composition-based stats. Identities = 22/120 (18%), Positives = 45/120 (37%), Gaps = 28/120 (23%) Query: 99 CTIQEWNEGK--IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 +I+++++ K + + G G+NL + + + W+ + Q ++R Sbjct: 549 TSIKDFSDEKSSCSIFLLSTRAGGLGINLT-AADTCILYDSDWNPQMDLQAMDRC----- 602 Query: 157 RQAGFKRAVFVYYLIAQ--------------------NTIDELVLQRLRTKSTIQDLLLN 196 + G + V VY L NT +E +L L+ T +D L+ Sbjct: 603 HRIGQTKPVHVYRLSTAQSIEIHLLSTKSPIDSLNQINTQEEDILALLKEDETAEDKLIQ 662 >gi|145551825|ref|XP_001461589.1| hypothetical protein [Paramecium tetraurelia strain d4-2] gi|124429424|emb|CAK94216.1| unnamed protein product [Paramecium tetraurelia] Length = 1225 Score = 76.9 bits (188), Expect = 2e-12, Method: Composition-based stats. Identities = 37/178 (20%), Positives = 66/178 (37%), Gaps = 20/178 (11%) Query: 37 NGAVYYDEEKHWKEVHDEKIKAL--EVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRT- 93 + ++ E K K KI A+ E + ++ + + L++ F + + Sbjct: 1036 SNSIEVQEIKETKWGPSSKILAVVNETKKVQLKREKCLIFTQWIQMIRLLEEKFQEEQIW 1095 Query: 94 ---------LDKDPCTIQEW-NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEE 143 +++ IQ + I L + GLNL N + WW+ Sbjct: 1096 CQVVTGAMSVEQRNKVIQSFEQHPSITALILSLRATSTGLNLTM-ANHVFLVDPWWNPAI 1154 Query: 144 HQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELV-LQRLRTKSTIQDLLLNALKK 200 Q I R + G K+ V V + NTI+E + L + K I+ ++ N KK Sbjct: 1155 EDQAIGR-----ADRIGQKKQVNVIRFLCANTIEEKINLLHQKKKKMIRKVIANEQKK 1207 >gi|134056267|emb|CAK96395.1| unnamed protein product [Aspergillus niger] Length = 1151 Score = 76.9 bits (188), Expect = 2e-12, Method: Composition-based stats. Identities = 27/146 (18%), Positives = 52/146 (35%), Gaps = 18/146 (12%) Query: 72 IVAYHFNSDLARLQKAFPQ------------GRTLDKDPCTIQEWNEGKIPLLFAHPASC 119 +V + S L ++ A + + N I +L A + Sbjct: 999 VVFSAWTSHLDLIEIALRDHDITGFTRLDGTMSLAARSKALEELHNNPDITVLLATIGAG 1058 Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 G GLNL + + ++ Q ++R+ + G R V + + +I+E Sbjct: 1059 GVGLNLTAASKVYIM-EPQYNPAAVAQAVDRV-----HRIGQTREVTTVQFLMKGSIEEK 1112 Query: 180 VLQRLRTKSTIQDLLLNALKKETIHV 205 + + + K + DL LN K + V Sbjct: 1113 IFELAKKKQQLADLSLNRGKLDKKEV 1138 >gi|74183379|dbj|BAE36571.1| unnamed protein product [Mus musculus] Length = 916 Score = 76.9 bits (188), Expect = 2e-12, Method: Composition-based stats. Identities = 33/205 (16%), Positives = 72/205 (35%), Gaps = 33/205 (16%) Query: 9 RELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKI---KALEVIIE- 64 ++ D E +E + L++A +E V + + +E +E Sbjct: 652 KDFVTDTDAEVLEHSGKMVLLFEILRMA------EEIGDKVLVFSQSLISLDLIEDFLEL 705 Query: 65 ------KANAAPIIVAYHFNSDLARLQ----KAFPQGRTLDKDPCTIQEWNEGKI---PL 111 + P+I + + ++ +E+N+ L Sbjct: 706 ASREKTEDKEKPLI----YKGEGKWIRNIDYYRLDGSTNAQSRKKWAEEFNDETNVRGRL 761 Query: 112 LFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLI 171 + G+NL N ++ F W+ Q I R+ + G + V+VY + Sbjct: 762 FIISTKAGSLGINL-VAANRVIIFDASWNPSYDIQSIFRV-----YRFGQTKPVYVYRFL 815 Query: 172 AQNTIDELVLQRLRTKSTIQDLLLN 196 AQ T+++ + R TK ++ +++ Sbjct: 816 AQGTMEDKIYDRQVTKQSLSFRVVD 840 >gi|326927740|ref|XP_003210048.1| PREDICTED: helicase ARIP4-like [Meleagris gallopavo] Length = 1470 Score = 76.5 bits (187), Expect = 2e-12, Method: Composition-based stats. Identities = 31/178 (17%), Positives = 67/178 (37%), Gaps = 37/178 (20%) Query: 52 HDEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQKAFPQ------------------- 90 + K+ L ++E++ I+V S L+ +++ + Sbjct: 726 NSPKMVLLFHLVEESVKLGDKILVFSQSLSTLSVIEEFLAKRPMPSPPGSDGIHNWVRNI 785 Query: 91 ------GRT-LDKDPCTIQEWNEGK---IPLLFAHPASCGHGLNLQYGGNILVFFSLWWD 140 G T + I ++N+ + L + G+NL G N +V F W+ Sbjct: 786 SYYRLDGSTSASERERLINQFNDPSNASVWLFLLSTRAGCLGVNL-IGANRVVVFDASWN 844 Query: 141 LEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNAL 198 Q + R + G K+ +Y L++ T+++ + R +K + D +++ L Sbjct: 845 PCHDAQAV-----CRVYRYGQKKPCHIYRLVSDYTLEKKIYDRQISKQGMSDRVVDDL 897 >gi|71410996|ref|XP_807766.1| DNA excision repair protein [Trypanosoma cruzi strain CL Brener] gi|70871837|gb|EAN85915.1| DNA excision repair protein, putative [Trypanosoma cruzi] Length = 1118 Score = 76.5 bits (187), Expect = 2e-12, Method: Composition-based stats. Identities = 30/155 (19%), Positives = 55/155 (35%), Gaps = 17/155 (10%) Query: 53 DEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAFPQGRTL----------DKDPCT 100 K++ L+ ++ + ++V L ++ Q Sbjct: 802 SGKLQTLQKLLTVWQRGGQRVLVFSQTRMALDIIENMCEQEGFKYIRMDGSTSGHHRQEL 861 Query: 101 IQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 + +NE + G G N +V F W+ +Q ER + G Sbjct: 862 MDRFNEDDSIVAALLTTRVGGVGVNLVGANRVVLFDPDWNPVTDEQARERAW-----RIG 916 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 R V VY LIA T++E +L+R K+ + + +L Sbjct: 917 QTRDVGVYRLIASGTVEEAILRRQLAKTYVTEKVL 951 >gi|325478692|gb|EGC81803.1| hypothetical protein HMPREF9290_0083 [Anaerococcus prevotii ACS-065-V-Col13] Length = 66 Score = 76.5 bits (187), Expect = 2e-12, Method: Composition-based stats. Identities = 25/67 (37%), Positives = 36/67 (53%), Gaps = 2/67 (2%) Query: 49 KEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGK 108 +HD K+ ALE +IE AN P+++AY + S L R++ F K +EWN G Sbjct: 2 IRIHDIKLDALEDLIEGANGKPVLIAYWYKSYLRRIKDKFDVREF--KTNEDFKEWNRGN 59 Query: 109 IPLLFAH 115 IP+ H Sbjct: 60 IPVAITH 66 >gi|46123559|ref|XP_386333.1| hypothetical protein FG06157.1 [Gibberella zeae PH-1] Length = 1117 Score = 76.5 bits (187), Expect = 2e-12, Method: Composition-based stats. Identities = 30/169 (17%), Positives = 61/169 (36%), Gaps = 27/169 (15%) Query: 50 EVHDEKIKAL-EVII------EKANAAP---IIVAYHFNSDLARLQ----------KAFP 89 E K +AL E ++ E P +V + S L ++ Sbjct: 932 EGPHTKTRALLEDLLKSKAASEANPDEPPYKSVVFSGWTSHLDLIELALNANGIMFTRLD 991 Query: 90 QGRTLDKDPCTIQEWNEGK-IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMI 148 + + + + E + ++ + G GLNL G ++ V ++ Q I Sbjct: 992 GSMSRTQRTIAMDRFREDNTVHVILVSIMAGGLGLNLTAGNSVYVM-EPQYNPAAEAQAI 1050 Query: 149 ERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 +R+ + G KR V I +++ +E +L+ K + L ++ Sbjct: 1051 DRV-----HRLGQKRPVRTVRYIMRDSFEEKMLELQEKKRKLASLSMDG 1094 >gi|154686721|ref|YP_001421882.1| YqhH [Bacillus amyloliquefaciens FZB42] gi|154352572|gb|ABS74651.1| YqhH [Bacillus amyloliquefaciens FZB42] Length = 556 Score = 76.5 bits (187), Expect = 2e-12, Method: Composition-based stats. Identities = 34/161 (21%), Positives = 72/161 (44%), Gaps = 17/161 (10%) Query: 44 EEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQ---------GRTL 94 ++ + + K + +I+K N +I+ + + LQ Q G Sbjct: 348 MDRINQVTQNSKAIQVVDLIQKINDK-VIIFTEYRATQIYLQWFLQQNGISSVPFRGGFK 406 Query: 95 DKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 +++ GK+ +L A + G G+NLQ+ N ++ + L W+ +Q I RI Sbjct: 407 RGKKDWMKDLFRGKVQVLIA-TEAGGEGINLQF-CNHIINYDLPWNPMRLEQRIGRI--- 461 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 + G +R V +Y + ++T++E +L+ L K + + ++ Sbjct: 462 --HRLGQERDVHIYNMATKHTVEEHILKLLYDKIHLFENVV 500 >gi|261198491|ref|XP_002625647.1| SNF2 family helicase/ATPase [Ajellomyces dermatitidis SLH14081] gi|239594799|gb|EEQ77380.1| SNF2 family helicase/ATPase [Ajellomyces dermatitidis SLH14081] gi|239610080|gb|EEQ87067.1| SNF2 family helicase/ATPase [Ajellomyces dermatitidis ER-3] Length = 1776 Score = 76.5 bits (187), Expect = 2e-12, Method: Composition-based stats. Identities = 30/170 (17%), Positives = 66/170 (38%), Gaps = 19/170 (11%) Query: 40 VYYDEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQ-GRTLDK 96 ++ + W + + IIE+ A +++ H L L++ Q GRT + Sbjct: 1330 IFTTDMDMWSLELSHRALVADQIIERSIAAGDKVLLFSHSIPTLNYLEQVLRQAGRTYSR 1389 Query: 97 ---------DPCTIQEWNEG-KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 + +N + + G GLN+ G N ++ F ++ +Q Sbjct: 1390 LDGKTPVATRQVATKNFNSDSNTQVYLISTRAGGLGLNI-PGANRVIIFDFQFNPTWEEQ 1448 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + R + G + V+VY +A T ++++ R K+ + +++ Sbjct: 1449 AVGR-----AYRLGQLKPVYVYRFLAGGTYEDIMHNRAVFKTQLAFRVVD 1493 >gi|154309155|ref|XP_001553912.1| hypothetical protein BC1G_07472 [Botryotinia fuckeliana B05.10] gi|150852515|gb|EDN27707.1| hypothetical protein BC1G_07472 [Botryotinia fuckeliana B05.10] Length = 1420 Score = 76.5 bits (187), Expect = 2e-12, Method: Composition-based stats. Identities = 34/171 (19%), Positives = 66/171 (38%), Gaps = 23/171 (13%) Query: 42 YDEEKHWKEVHDEKIKALEVII----EKANAAPIIVAYHFNSDLARLQKAFPQGR----- 92 D + ++ + K AL+ ++ E+A +++ F LAR+ + Sbjct: 1192 SDYDPNFPLIPSAKTTALKALLLKGFEEAPDDKVVIYVQFR-TLARIIGRMCKAEGWGFL 1250 Query: 93 ------TLDKDPCTIQEW-NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQ 145 +L+ +E+ N I +L A G GLN + N + LWW+ Q Sbjct: 1251 YLTGDASLEHRSKATKEFRNRDDIQILIAGLKCGGLGLNFPF-ANRCISLDLWWNHAVEQ 1309 Query: 146 QMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 Q RI + G + ++ L+ N++D +L K + ++ Sbjct: 1310 QAFGRIF-----RIGQNKETWMTRLVVANSVDMRLLGMQNWKLKACEKAID 1355 >gi|118096755|ref|XP_414277.2| PREDICTED: similar to KIAA0809 protein [Gallus gallus] Length = 1473 Score = 76.5 bits (187), Expect = 2e-12, Method: Composition-based stats. Identities = 29/179 (16%), Positives = 66/179 (36%), Gaps = 38/179 (21%) Query: 52 HDEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQKAFPQGRTLD-------------- 95 + K+ L ++E++ I+V S L+ +++ + + Sbjct: 728 NSPKMVLLFHLVEESVKLGDKILVFSQSLSTLSVIEEFLAKRPMPNPPGSDGGVHNWVRN 787 Query: 96 -------------KDPCTIQEWNEGK---IPLLFAHPASCGHGLNLQYGGNILVFFSLWW 139 + I ++N+ + L + G+NL G N +V F W Sbjct: 788 ISYYRLDGSTSASERERLINQFNDPSNASVWLFLLSTRAGCLGVNL-IGANRVVVFDASW 846 Query: 140 DLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNAL 198 + Q + R + G K+ +Y L++ T+++ + R +K + D +++ L Sbjct: 847 NPCHDAQAV-----CRVYRYGQKKPCHIYRLVSDYTLEKKIYDRQISKQGMSDRVVDDL 900 >gi|73997422|ref|XP_867833.1| PREDICTED: similar to chromodomain helicase DNA binding protein 4 isoform 13 [Canis familiaris] Length = 1918 Score = 76.5 bits (187), Expect = 2e-12, Method: Composition-based stats. Identities = 19/154 (12%), Positives = 46/154 (29%), Gaps = 36/154 (23%) Query: 67 NAAPIIVAYHFNSDLARLQ----------KAFPQGRTLDKDPCTIQEWNE---------- 106 +++ L L+ + G T + I +N Sbjct: 1053 GGHRVLIFSQMTKMLDLLEDFLEHEGYKYERIDGGITGNMRQEAIDRFNGKGRSRFHAGS 1112 Query: 107 ----------GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 + + G G+NL + ++ + W+ Q +R Sbjct: 1113 PTWDSIQAPGAQQFCFLLSTRAGGLGINL-ATADTVIIYDSDWNPHNDIQA-----FSRA 1166 Query: 157 RQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 + G + V +Y + + +++E + Q + K + Sbjct: 1167 HRIGQNKKVMIYRFVTRASVEERITQVAKKKMML 1200 >gi|268576823|ref|XP_002643391.1| C. briggsae CBR-CSB-1 protein [Caenorhabditis briggsae] gi|187026766|emb|CAP34339.1| CBR-CSB-1 protein [Caenorhabditis briggsae AF16] Length = 1015 Score = 76.5 bits (187), Expect = 2e-12, Method: Composition-based stats. Identities = 39/215 (18%), Positives = 76/215 (35%), Gaps = 29/215 (13%) Query: 2 KQYHKFQRELYCD-LQGENIEAFNSASKTVKCLQLANGA-VYYDEEKHWKEV----HDEK 55 + Y +F + + NI+AF K + N +Y + ++ K Sbjct: 521 RIYQEFCGSIEVQQILERNIKAFGG---INKLGDICNHPGIYRKMKPGTEKFGRMHDSGK 577 Query: 56 IKALEVIIEKANAAP---IIVAYH---------FNSDLARLQKAFPQGR-TLDKDPCTIQ 102 + L + + P +++ F D ++ G +L + I+ Sbjct: 578 VVMLFRLFRRWFKNPNNRVVLFTQRLAVVDMLAFYLDKKQIAYCTLTGNNSLPERTRIIK 637 Query: 103 EWNEG-KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGF 161 + E I + + G GLNL N V F W+ + Q RI + G Sbjct: 638 RFEEDLSIKVFLMTTRTGGLGLNL-ASANKAVIFDPDWNPQADNQAKMRI-----YRMGQ 691 Query: 162 KRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + V + L++ +I++ + K + + LLN Sbjct: 692 QHKVTIVRLVSNGSIEDRKYFKQIQKENLAEQLLN 726 >gi|327351004|gb|EGE79861.1| SNF2 family helicase/ATPase [Ajellomyces dermatitidis ATCC 18188] Length = 1775 Score = 76.5 bits (187), Expect = 2e-12, Method: Composition-based stats. Identities = 30/170 (17%), Positives = 66/170 (38%), Gaps = 19/170 (11%) Query: 40 VYYDEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQ-GRTLDK 96 ++ + W + + IIE+ A +++ H L L++ Q GRT + Sbjct: 1329 IFTTDMDMWSLELSHRALVADQIIERSIAAGDKVLLFSHSIPTLNYLEQVLRQAGRTYSR 1388 Query: 97 ---------DPCTIQEWNEG-KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 + +N + + G GLN+ G N ++ F ++ +Q Sbjct: 1389 LDGKTPVATRQVATKNFNSDSNTQVYLISTRAGGLGLNI-PGANRVIIFDFQFNPTWEEQ 1447 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + R + G + V+VY +A T ++++ R K+ + +++ Sbjct: 1448 AVGR-----AYRLGQLKPVYVYRFLAGGTYEDIMHNRAVFKTQLAFRVVD 1492 >gi|19552849|ref|NP_600851.1| helicase [Corynebacterium glutamicum ATCC 13032] gi|62390520|ref|YP_225922.1| SNF2 family DNA/RNA helicase [Corynebacterium glutamicum ATCC 13032] gi|21324406|dbj|BAB99030.1| Superfamily II DNA/RNA helicases, SNF2 family [Corynebacterium glutamicum ATCC 13032] gi|41325857|emb|CAF21646.1| Superfamily II DNA/RNA helicase, SNF2 family [Corynebacterium glutamicum ATCC 13032] Length = 892 Score = 76.5 bits (187), Expect = 2e-12, Method: Composition-based stats. Identities = 30/154 (19%), Positives = 59/154 (38%), Gaps = 19/154 (12%) Query: 51 VHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGK 108 + K++ + + E+A + ++ +F L L+K + R + + + Sbjct: 696 LTSAKMQRILELFEEAEEHGRKALIFTYFLDVLDELEKHLGE-RVIGRISGDVPATKRQL 754 Query: 109 I----------PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQ 158 + L A + G GLN+Q ++ + QQ + R+ + Sbjct: 755 LVDALSHSKPGSALIAQITAGGVGLNIQ-SASLCIICEPQVKPTIEQQAVARV-----HR 808 Query: 159 AGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQD 192 G V V+ LI T DE +L+ L K+ + D Sbjct: 809 MGQTATVQVHRLIGDETADERMLEILAGKTHVFD 842 >gi|307266866|ref|ZP_07548387.1| helicase domain protein [Thermoanaerobacter wiegelii Rt8.B1] gi|306918113|gb|EFN48366.1| helicase domain protein [Thermoanaerobacter wiegelii Rt8.B1] Length = 224 Score = 76.5 bits (187), Expect = 2e-12, Method: Composition-based stats. Identities = 28/188 (14%), Positives = 66/188 (35%), Gaps = 27/188 (14%) Query: 29 TVKCLQLANGAVYYDEEKHWKEV----HDEKIKALEVIIEKAN--AAPIIVAYHFNSDLA 82 K ++L +E K++ L ++ + ++ H+ A Sbjct: 18 LQKLMELCAHPRLVRDEGEVNTFQLLSESGKLQRLIELLNEIKRRGEKAVIFTHYIKMQA 77 Query: 83 RLQKAF----------PQGRTLDKDPCTIQEWNEGK-IPLLFAHPASCGHGLNLQYGGNI 131 L+K G I + E ++ + G G+ + N Sbjct: 78 ILRKVIMDVFGINCPVINGNIKGDRMSIIDRFKESSGFGVIILSTRAAGVGVTITEANN- 136 Query: 132 LVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQN----TIDELVLQRLRTK 187 ++ ++ W+ +Q +R+ + G R V +YY I + T++E + + L+ K Sbjct: 137 VIHYTRDWNPAVEKQATDRV-----YRIGQTREVNIYYPICISSRGKTVEERLNEVLQKK 191 Query: 188 STIQDLLL 195 + + ++ Sbjct: 192 LQLLNEVI 199 >gi|332024047|gb|EGI64265.1| Transcriptional regulator ATRX-like protein [Acromyrmex echinatior] Length = 2412 Score = 76.5 bits (187), Expect = 2e-12, Method: Composition-based stats. Identities = 22/86 (25%), Positives = 39/86 (45%), Gaps = 6/86 (6%) Query: 111 LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYL 170 L + G G+NL N ++ F W+ Q I RI + G K+ +VY Sbjct: 2034 LFLISTRAGGLGINLT-AANRVIIFDASWNPSHDVQSIFRI-----YRFGQKKPCYVYRF 2087 Query: 171 IAQNTIDELVLQRLRTKSTIQDLLLN 196 +A T++E + R TK ++ +++ Sbjct: 2088 LAAGTMEEKIYNRQVTKLSLSCRVVD 2113 >gi|530788|gb|AAA20872.1| X-linked nuclear protein [Homo sapiens] gi|1588601|prf||2209217A ATR-X gene Length = 1298 Score = 76.5 bits (187), Expect = 2e-12, Method: Composition-based stats. Identities = 34/202 (16%), Positives = 71/202 (35%), Gaps = 27/202 (13%) Query: 9 RELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIE---- 64 ++ D E +E + L++A ++ + +E +E Sbjct: 864 KDFVTDADAEVLEHSGKMVLLFEILRMAEE---IGDKVLVFSQSLISLDLIEDFLELADK 920 Query: 65 ---KANAAPIIVAYHFNSDLARLQ----KAFPQGRTLDKDPCTIQEWNEGKI---PLLFA 114 K P+I + + L+ T +E+N+ L Sbjct: 921 SREKTEDKPLI----YKGEGKWLRNIDYYRLDGSTTAQSRKKWAEEFNDETNVRGRLFII 976 Query: 115 HPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQN 174 + G+NL N ++ F W+ Q I R+ + G + V+VY +AQ Sbjct: 977 STKAGSLGINL-VAANRVIIFDASWNPSYDIQSIFRV-----YRFGQTKPVYVYRFLAQG 1030 Query: 175 TIDELVLQRLRTKSTIQDLLLN 196 T+++ + R TK ++ +++ Sbjct: 1031 TMEDKIYDRQVTKQSLSFRVVD 1052 >gi|237643583|ref|YP_002884273.1| GTA [Bombyx mandarina nucleopolyhedrovirus] gi|229358129|gb|ACQ57224.1| GTA [Bombyx mandarina nucleopolyhedrovirus] Length = 506 Score = 76.5 bits (187), Expect = 2e-12, Method: Composition-based stats. Identities = 34/196 (17%), Positives = 65/196 (33%), Gaps = 34/196 (17%) Query: 28 KTVKCLQLANGAVYYDEEKHWKEVHDEK------------IKALEVIIEKANAAPIIVAY 75 +K Q+ ++ E D + ++ I+ ++ I+V Sbjct: 303 LILKLRQICCHPYLAMHGRNLLETDDCFKMDYMSSKCKRVLDLVDDILNTSDDKIILV-S 361 Query: 76 HFNSDLARLQKAFPQ-----------GRTLDKDPCTIQEWNEGKIP--LLFAHPASCGHG 122 + L + F Q + D+ N +L G G Sbjct: 362 QWVEYLKIFENFFKQKNIATLMYTGQLKVEDRILADTTFNNAADTQHRILLLSIKCGGVG 421 Query: 123 LNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYL--IAQNTIDELV 180 LNL GGN +V W+ + Q +RI + G + +VY + + N+I++ + Sbjct: 422 LNL-IGGNHIVMLEPHWNPQIELQAQDRIS-----RMGQTKNTYVYKMLNVEDNSIEKYI 475 Query: 181 LQRLRTKSTIQDLLLN 196 QR K + + Sbjct: 476 KQRQDKKIAFVNTVFE 491 >gi|224110292|ref|XP_002315473.1| chromatin remodeling complex subunit [Populus trichocarpa] gi|222864513|gb|EEF01644.1| chromatin remodeling complex subunit [Populus trichocarpa] Length = 670 Score = 76.5 bits (187), Expect = 2e-12, Method: Composition-based stats. Identities = 41/213 (19%), Positives = 82/213 (38%), Gaps = 25/213 (11%) Query: 1 MKQYHKFQRELYCDLQGENIEAFNSASKTVKCLQ--LANGAVYYDEEKHWKEVHDEKIKA 58 MKQ + REL A + +++K + L N +Y D + + Sbjct: 428 MKQINTLFRELEVVKGKIKACASDEEVESLKFTEKNLIN-KIYTDS---AEAKISGVLDY 483 Query: 59 LEVIIEKANAAPIIVAYHFNSDLARLQKAFPQ---------GRTLDKDPCT-IQEWNEGK 108 L +IE ++ H S + + + + G+T + ++ E Sbjct: 484 LGTVIEA--GCKFLIFAHHQSMIDSIHEFLLKKKVGCIRIDGKTAAASRQALVTDFQEKD 541 Query: 109 -IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFV 167 I + G GL L + ++F L W + Q +R + G +V + Sbjct: 542 AIKAAVLSIRAGGVGLTLT-AASTVIFAELSWTPGDLIQAEDR-----AHRIGQVSSVNI 595 Query: 168 YYLIAQNTIDELVLQRLRTKSTIQDLLLNALKK 200 YYL+A +T+D+++ +++K +L+ +K Sbjct: 596 YYLLANDTVDDIIWDVVQSKLENLGQMLDGQEK 628 >gi|268564201|ref|XP_002639041.1| C. briggsae CBR-XNP-1 protein [Caenorhabditis briggsae] gi|187022150|emb|CAP38921.1| CBR-XNP-1 protein [Caenorhabditis briggsae AF16] Length = 1333 Score = 76.5 bits (187), Expect = 2e-12, Method: Composition-based stats. Identities = 35/190 (18%), Positives = 74/190 (38%), Gaps = 30/190 (15%) Query: 27 SKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVI---IEKANAAPIIVAYHFNSDLAR 83 S + K + L +E V + +++L +I +E F+ D Sbjct: 919 SLSNKLVLLMAIIKKCEEIGDKLLVFSQSLESLALIRRMLEYMAGTGQ----WFSDDHEA 974 Query: 84 LQK-----AFPQGR---TLDKDPCTIQE------WNEGKI---PLLFAHPASCGHGLNLQ 126 L ++ +G T+D +++ +N+ + L+ + G N+ Sbjct: 975 LNAEGETWSWLEGEDYMTIDGSVQSVKRDAVQTQFNDPENLRARLMLISTRAGSLGTNM- 1033 Query: 127 YGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRT 186 N +V F W+ Q + R+ + G + V++Y IAQ T++E + +R T Sbjct: 1034 VAANRVVIFDACWNPSHDTQSLFRV-----YRFGQTKPVYIYRFIAQGTMEERIYKRQVT 1088 Query: 187 KSTIQDLLLN 196 K + +++ Sbjct: 1089 KESTSMRVVD 1098 >gi|311110806|ref|ZP_07712203.1| superfamily II DNA/RNA helicase, SNF2 family [Lactobacillus gasseri MV-22] gi|311065960|gb|EFQ46300.1| superfamily II DNA/RNA helicase, SNF2 family [Lactobacillus gasseri MV-22] Length = 761 Score = 76.5 bits (187), Expect = 2e-12, Method: Composition-based stats. Identities = 30/153 (19%), Positives = 59/153 (38%), Gaps = 18/153 (11%) Query: 52 HDEKIKALEVIIEKANA--APIIVAYHFNSDLARLQKA---------FPQGRTLDKDPCT 100 +KI+ + I ++ +IV F + + +L K + ++ Sbjct: 566 DSQKIEQIINICVDSHENSEKVIVFSFFKNYVLKLLKKKLPFLADDIISGDLSSNQRQEV 625 Query: 101 IQEW-NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQA 159 I ++ +L + G GLN+Q N ++ W Q I R + Sbjct: 626 IDKFSENPNQNVLLVQIDAGGFGLNIQ-AANRVILCEPQWKPSTENQAISR-----AYRM 679 Query: 160 GFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQD 192 G R V VY L+ + ++DE +++ + K I + Sbjct: 680 GQNRNVMVYRLLTKESVDETMMEIIHEKEDIFN 712 >gi|47209419|emb|CAF93109.1| unnamed protein product [Tetraodon nigroviridis] Length = 1232 Score = 76.5 bits (187), Expect = 2e-12, Method: Composition-based stats. Identities = 22/162 (13%), Positives = 49/162 (30%), Gaps = 34/162 (20%) Query: 68 AAPIIVAYHFNSDLARLQKAFP---------QGRTLDKDPC-TIQEWNEGKIPLLFAHPA 117 +++ L +Q G ++ ++ ++ I Sbjct: 351 GHRVLLFSQMTRMLDIVQDYMEYRGYSYERLDGSIRGEERNLAVKNFSSNDIFAFLLSTK 410 Query: 118 SCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQ------------------- 158 + G GLNL + ++F ++ Q R Q + Sbjct: 411 AGGVGLNLT-AADTVIFIDSDFNPHNDLQAAARCHRIGQDRWCSGTTVVTTWAGPQPDVL 469 Query: 159 ----AGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 R V V LI ++T++E++ R +K + ++ Sbjct: 470 TITTVTHSRPVKVIRLIGRDTVEEIMYCRAASKLNLTKTVME 511 >gi|606833|gb|AAC50069.1| helicase II [Homo sapiens] Length = 1641 Score = 76.5 bits (187), Expect = 2e-12, Method: Composition-based stats. Identities = 33/202 (16%), Positives = 71/202 (35%), Gaps = 27/202 (13%) Query: 9 RELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIE---- 64 ++ D E +E + L++A ++ + +E +E Sbjct: 1145 KDFVTDADAEVLEHSGKMVLLFEILRMAEE---IGDKVLVFSQSLISLDLIEDFLELASR 1201 Query: 65 ---KANAAPIIVAYHFNSDLARLQ----KAFPQGRTLDKDPCTIQEWNEGKI---PLLFA 114 + P+I + + L+ T +E+N+ L Sbjct: 1202 EKTEDKDKPLI----YKGEGKWLRNIDYYRLDGSTTAQSRKKWAEEFNDETNVRGRLFII 1257 Query: 115 HPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQN 174 + G+NL N ++ F W+ Q I R+ + G + V+VY +AQ Sbjct: 1258 STKAGSLGINL-VAANRVIIFDASWNPSYDIQSIFRV-----YRFGQTKPVYVYRFLAQG 1311 Query: 175 TIDELVLQRLRTKSTIQDLLLN 196 T+++ + R TK ++ +++ Sbjct: 1312 TMEDKIYDRQVTKQSLSFRVVD 1333 >gi|82596817|ref|XP_726418.1| hypothetical protein [Plasmodium yoelii yoelii str. 17XNL] gi|23481821|gb|EAA17983.1| hypothetical protein [Plasmodium yoelii yoelii] Length = 875 Score = 76.5 bits (187), Expect = 2e-12, Method: Composition-based stats. Identities = 36/148 (24%), Positives = 62/148 (41%), Gaps = 20/148 (13%) Query: 54 EKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQKAFPQGRT----------LDKDPCTI 101 K+KA++ I ++ H + + + + + +DK I Sbjct: 576 AKVKAIKEYITYLIDADIKFLLFCHHKLVMDEIDEFLKEKKLGFIRVDGLTPIDKREIYI 635 Query: 102 QEWNEG-KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 + + KI + +CG GLNL N +VF L+W + Q +R + G Sbjct: 636 KNFQSDEKIRIALLSITACGVGLNLT-AANTVVFGELYWVPGQMIQAEDR-----AHRIG 689 Query: 161 FKR-AVFVYYLIAQNTIDELVLQRLRTK 187 V ++YL+AQNTIDE+V + + K Sbjct: 690 TTHDTVNIHYLVAQNTIDEVVWKIINRK 717 >gi|116629551|ref|YP_814723.1| SNF2 family DNA/RNA helicase [Lactobacillus gasseri ATCC 33323] gi|116095133|gb|ABJ60285.1| Superfamily II DNA/RNA helicase, SNF2 family [Lactobacillus gasseri ATCC 33323] Length = 917 Score = 76.5 bits (187), Expect = 2e-12, Method: Composition-based stats. Identities = 30/153 (19%), Positives = 59/153 (38%), Gaps = 18/153 (11%) Query: 52 HDEKIKALEVIIEKANA--APIIVAYHFNSDLARLQKA---------FPQGRTLDKDPCT 100 +KI+ + I ++ +IV F + + +L K + ++ Sbjct: 722 DSQKIEQIINICVDSHENSEKVIVFSFFKNYVLKLLKKKLPFLADDIISGDLSSNQRQEV 781 Query: 101 IQEW-NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQA 159 I ++ +L + G GLN+Q N ++ W Q I R + Sbjct: 782 IDKFSENPNQNVLLVQIDAGGFGLNIQ-AANRVILCEPQWKPSTENQAISR-----AYRM 835 Query: 160 GFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQD 192 G R V VY L+ + ++DE +++ + K I + Sbjct: 836 GQNRNVMVYRLLTKESVDETMMEIIHEKEDIFN 868 >gi|157126395|ref|XP_001654617.1| transcriptional regulator ATRX (X-linked helicase II) [Aedes aegypti] gi|108873303|gb|EAT37528.1| transcriptional regulator ATRX (X-linked helicase II) [Aedes aegypti] Length = 2905 Score = 76.5 bits (187), Expect = 2e-12, Method: Composition-based stats. Identities = 27/114 (23%), Positives = 45/114 (39%), Gaps = 9/114 (7%) Query: 86 KAFPQGRTLDKDPCTIQEWNEG---KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLE 142 + I +N+ + + G G+NL G N ++ W+ Sbjct: 1866 YRLDGKTQKNLRHRMITSFNDPSNKRTKCFLISAKAGGQGINL-IGANRVIILDTSWNPS 1924 Query: 143 EHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 QQ I RI + G K+ FVY L+A T++E V R TK + +++ Sbjct: 1925 NDQQNIFRIF-----RLGQKKKCFVYRLLAMGTMEEKVYSRSVTKQAMSFRVVD 1973 >gi|320528040|ref|ZP_08029206.1| protein, SNF2 family [Solobacterium moorei F0204] gi|320131666|gb|EFW24230.1| protein, SNF2 family [Solobacterium moorei F0204] Length = 706 Score = 76.5 bits (187), Expect = 2e-12, Method: Composition-based stats. Identities = 41/197 (20%), Positives = 82/197 (41%), Gaps = 24/197 (12%) Query: 10 ELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKA--N 67 + +C + + I ++ A ++ + + W ++ K + + + +A Sbjct: 495 DEWCMMNEDEINSYRKAVESENFMAM--------RRVSWNSLNSTKAERMTELCLQALSE 546 Query: 68 AAPIIVAYHFNSDLA-----RLQKAFPQGR---TLDKDPCTIQEWNEGKIPLLFAHPASC 119 +I+ +F L+ L KA P +L+K + +++E +L + Sbjct: 547 GRKVIIFSYFLDTLSFVSDLLLGKALPVISGKLSLEKRQDILHQFDEPIARVLPIQIHAG 606 Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 G GLN+Q I++ + Q I R+ + G VFVY L++ +TIDE Sbjct: 607 GIGLNIQT-AEIVILCEPQLKPSDEMQAISRV-----YRMGQVNHVFVYRLLSADTIDET 660 Query: 180 VLQRLRTKSTIQDLLLN 196 +++RL K I D + Sbjct: 661 LVKRLHEKQNIFDQFAD 677 >gi|15613532|ref|NP_241835.1| SNF2 helicase [Bacillus halodurans C-125] gi|10173584|dbj|BAB04688.1| SNF2 helicase [Bacillus halodurans C-125] Length = 577 Score = 76.5 bits (187), Expect = 2e-12, Method: Composition-based stats. Identities = 41/189 (21%), Positives = 76/189 (40%), Gaps = 30/189 (15%) Query: 9 RELYCDLQ--GENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKA 66 ++ DL GE I A + A + +K L+ DE+ + I L ++E+ Sbjct: 347 KKNCLDLIQLGERITAPSKAIELLKLLK------QSDEQAIVYSEYRVTIDLLSELLEEH 400 Query: 67 NAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQ 126 + + + RL Q +I+ + + + S G GLNLQ Sbjct: 401 D-------FTVTTYHGRLSSREKQ--------QSIERFKNKEAQVF-ISSESGGQGLNLQ 444 Query: 127 YGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRT 186 + L+ F L W+ +Q I R+ + G V +Y + + IDE +L L + Sbjct: 445 F-CRRLINFDLPWNPMRIEQRIGRV-----HRFGQVNDVEIYTMPTKGAIDEYLLYTLTS 498 Query: 187 KSTIQDLLL 195 K + ++++ Sbjct: 499 KVNLFEVVI 507 >gi|328554198|gb|AEB24690.1| RNA polymerase-associated helicase protein [Bacillus amyloliquefaciens TA208] gi|328912591|gb|AEB64187.1| putative RNA polymerase-associated helicase protein [Bacillus amyloliquefaciens LL3] Length = 556 Score = 76.5 bits (187), Expect = 2e-12, Method: Composition-based stats. Identities = 34/161 (21%), Positives = 72/161 (44%), Gaps = 17/161 (10%) Query: 44 EEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQ---------GRTL 94 ++ + + K + +I+K N +I+ + + LQ Q G Sbjct: 348 MDRINQVTQNSKAIQVVDLIQKINDK-VIIFTEYRATQIYLQWFLQQNGISSVPFRGGFK 406 Query: 95 DKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 +++ GK+ +L A + G G+NLQ+ N ++ + L W+ +Q I RI Sbjct: 407 RGKKDWMKDLFRGKVQVLIA-TEAGGEGINLQF-CNHIINYDLPWNPMRLEQRIGRI--- 461 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 + G +R V +Y + ++T++E +L+ L K + + ++ Sbjct: 462 --HRLGQERDVHIYNMATKHTVEEHILKLLYDKIHLFENVV 500 >gi|159164912|gb|ABV80241.2| mutant required to maintain repression 1 [Zea mays] Length = 1435 Score = 76.5 bits (187), Expect = 2e-12, Method: Composition-based stats. Identities = 27/151 (17%), Positives = 59/151 (39%), Gaps = 23/151 (15%) Query: 63 IEKANAAPIIVAYHFNSDLARLQKAFPQ--------------GRTLDK-DPCTIQEWNEG 107 + +A +++ F L +++ + G+ L + +I+ +N Sbjct: 1226 LSEALREKVLIFSQFIQPLELIKEHLRKFFKWREGKEILQMDGKILPRYRQASIEAFNNP 1285 Query: 108 KIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 +L A +C G++L G + +V + W+ + R ++R + G K+ V Sbjct: 1286 NNDSRVLLASTRACCEGISLT-GASRIVLLDVVWN-----PAVGRQAISRAFRIGQKKFV 1339 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + Y LI T + R K + L+ + Sbjct: 1340 YTYNLITYGTGEGDKYDRQAEKDHLSKLVFS 1370 >gi|159164909|gb|ABV80238.2| required to maintain repression 1 [Zea mays] Length = 1435 Score = 76.5 bits (187), Expect = 2e-12, Method: Composition-based stats. Identities = 27/151 (17%), Positives = 59/151 (39%), Gaps = 23/151 (15%) Query: 63 IEKANAAPIIVAYHFNSDLARLQKAFPQ--------------GRTLDK-DPCTIQEWNEG 107 + +A +++ F L +++ + G+ L + +I+ +N Sbjct: 1226 LSEALREKVLIFSQFIQPLELIKEHLRKFFKWREGKEILQMDGKILPRYRQASIEAFNNP 1285 Query: 108 KIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 +L A +C G++L G + +V + W+ + R ++R + G K+ V Sbjct: 1286 NNDSRVLLASTRACCEGISLT-GASRIVLLDVVWN-----PAVGRQAISRAFRIGQKKFV 1339 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + Y LI T + R K + L+ + Sbjct: 1340 YTYNLITYGTGEGDKYDRQAEKDHLSKLVFS 1370 >gi|159164908|gb|ABV80237.2| required to maintain repression 1 [Zea mays] gi|159164910|gb|ABV80239.2| required to maintain repression 1 [Zea mays] Length = 1435 Score = 76.5 bits (187), Expect = 2e-12, Method: Composition-based stats. Identities = 27/151 (17%), Positives = 59/151 (39%), Gaps = 23/151 (15%) Query: 63 IEKANAAPIIVAYHFNSDLARLQKAFPQ--------------GRTLDK-DPCTIQEWNEG 107 + +A +++ F L +++ + G+ L + +I+ +N Sbjct: 1226 LSEALREKVLIFSQFIQPLELIKEHLRKFFKWREGKEILQMDGKILPRYRQASIEAFNNP 1285 Query: 108 KIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 +L A +C G++L G + +V + W+ + R ++R + G K+ V Sbjct: 1286 NNDSRVLLASTRACCEGISLT-GASRIVLLDVVWN-----PAVGRQAISRAFRIGQKKFV 1339 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + Y LI T + R K + L+ + Sbjct: 1340 YTYNLITYGTGEGDKYDRQAEKDHLSKLVFS 1370 >gi|159164914|gb|ABV80243.2| mutant required to maintain repression 1 [Zea mays] Length = 1435 Score = 76.5 bits (187), Expect = 2e-12, Method: Composition-based stats. Identities = 27/151 (17%), Positives = 59/151 (39%), Gaps = 23/151 (15%) Query: 63 IEKANAAPIIVAYHFNSDLARLQKAFPQ--------------GRTLDK-DPCTIQEWNEG 107 + +A +++ F L +++ + G+ L + +I+ +N Sbjct: 1226 LSEALREKVLIFSQFIQPLELIKEHLRKFFKWREGKEILQMDGKILPRYRQASIEAFNNP 1285 Query: 108 KIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 +L A +C G++L G + +V + W+ + R ++R + G K+ V Sbjct: 1286 NNDSRVLLASTRACCEGISLT-GASRIVLLDVVWN-----PAVGRQAISRAFRIGQKKFV 1339 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + Y LI T + R K + L+ + Sbjct: 1340 YTYNLITYGTGEGDKYDRQAEKDHLSKLVFS 1370 >gi|88855390|ref|ZP_01130054.1| ATP-dependent RNA helicase [marine actinobacterium PHSC20C1] gi|88815297|gb|EAR25155.1| ATP-dependent RNA helicase [marine actinobacterium PHSC20C1] Length = 714 Score = 76.5 bits (187), Expect = 2e-12, Method: Composition-based stats. Identities = 27/110 (24%), Positives = 51/110 (46%), Gaps = 7/110 (6%) Query: 95 DKDPCTIQEW-NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGV 153 I + N+ ++ ++ A + G GLNLQ N +V L W E Q I+R+ Sbjct: 591 KARQNAIDSFANDPEVAVVVASLTAAGVGLNLQAASN-VVLAELSWTNAEQTQAIDRV-- 647 Query: 154 TRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETI 203 + G + V + +IA +TID + + + +K+ + L+ ++ I Sbjct: 648 ---HRIGQELPVTAWRIIAAHTIDARIAELIDSKAGLAARALDGSDEDVI 694 >gi|281206497|gb|EFA80683.1| SNF2-related domain-containing protein [Polysphondylium pallidum PN500] Length = 1959 Score = 76.5 bits (187), Expect = 2e-12, Method: Composition-based stats. Identities = 21/113 (18%), Positives = 43/113 (38%), Gaps = 8/113 (7%) Query: 86 KAFPQGRTLDKDPCTIQEWNE--GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEE 143 + I ++N+ + L + G NL G ++ L W+ Sbjct: 1736 YRLDGAVRPQERQNLINKFNDTGNQCKLFIISTKAGSLGTNLT-AGTRVILMDLLWNPVH 1794 Query: 144 HQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 +Q + R + G + V+VY LI +++E + RL K ++ ++ Sbjct: 1795 ERQAVYRCF-----RIGQTKPVYVYTLIIAGSLEENIYNRLVFKQSLAKRAID 1842 >gi|198430961|ref|XP_002124279.1| PREDICTED: similar to MGC115661 protein [Ciona intestinalis] Length = 831 Score = 76.5 bits (187), Expect = 2e-12, Method: Composition-based stats. Identities = 39/197 (19%), Positives = 75/197 (38%), Gaps = 33/197 (16%) Query: 8 QRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKAN 67 ++ L N + ++A K LQ Y++E +K + K L ++E Sbjct: 515 RKLLEASQSAVNQKGLSAAEKHGILLQ------YFNETAKFK-LPGIKSYVL-DLLE--G 564 Query: 68 AAPIIVAYHFNS--------------DLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLF 113 ++ H S D R+ + P R + + + Sbjct: 565 GHKFLLFAHHKSVLDSVETDLNKKGCDYIRIDGSTPSER---RQTEVARFQENSSCKVAL 621 Query: 114 AHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQ 173 + G+ L + +++VF L+W+ Q +R + G + V V+YLIA+ Sbjct: 622 LSITAANMGITL-HSASLVVFAELFWNPGILVQAEDRC-----YRIGQRDVVNVHYLIAK 675 Query: 174 NTIDELVLQRLRTKSTI 190 NT D+L+ Q ++ K + Sbjct: 676 NTADDLIWQMIKKKLEV 692 >gi|71651388|ref|XP_814373.1| DNA excision/repair protein SNF2 [Trypanosoma cruzi strain CL Brener] gi|70879339|gb|EAN92522.1| DNA excision/repair protein SNF2, putative [Trypanosoma cruzi] Length = 729 Score = 76.5 bits (187), Expect = 2e-12, Method: Composition-based stats. Identities = 28/156 (17%), Positives = 55/156 (35%), Gaps = 19/156 (12%) Query: 51 VHDEKIK-ALEVIIEK-ANAAPIIVAYHFNSDLARLQ----------KAFPQGRTLDKDP 98 ++ KI AL ++++ +V L L ++ Sbjct: 414 LNSSKISSALALVVKCIGEQRKTLVFSRSKRLLDLLAVALRCWLIDFARLDGDVPAEERL 473 Query: 99 CTIQEWNEGK-IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 T+Q +N+ + + + G GL ++ +++ W+ Q I+R+ Sbjct: 474 KTVQGFNQSERLLVCLLTTQVGGVGLTVEAASAVIIM-DPSWNPSSDAQAIDRV-----H 527 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDL 193 + G R V VY LI T++E V + K Sbjct: 528 RIGQTRDVVVYRLITCGTVEEKVYRNQVFKVMAAKQ 563 >gi|322823065|gb|EFZ28912.1| DNA excision/repair protein SNF2, putative [Trypanosoma cruzi] Length = 737 Score = 76.5 bits (187), Expect = 2e-12, Method: Composition-based stats. Identities = 28/156 (17%), Positives = 55/156 (35%), Gaps = 19/156 (12%) Query: 51 VHDEKIK-ALEVIIEK-ANAAPIIVAYHFNSDLARLQ----------KAFPQGRTLDKDP 98 ++ KI AL ++++ +V L L ++ Sbjct: 422 LNSSKISSALALVVKCIGEQRKTLVFSRSKRLLDLLAVALRCWLIDFARLDGDVPAEERL 481 Query: 99 CTIQEWNEGK-IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 T+Q +N+ + + + G GL ++ +++ W+ Q I+R+ Sbjct: 482 KTVQGFNQSERLLVCLLTTQVGGVGLTVEAASAVIIM-DPSWNPSSDAQAIDRV-----H 535 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDL 193 + G R V VY LI T++E V + K Sbjct: 536 RIGQTRDVVVYRLITCGTVEEKVYRNQVFKVMAAKQ 571 >gi|302895297|ref|XP_003046529.1| SNF2 family DNA-dependent ATPase [Nectria haematococca mpVI 77-13-4] gi|256727456|gb|EEU40816.1| SNF2 family DNA-dependent ATPase [Nectria haematococca mpVI 77-13-4] Length = 1111 Score = 76.1 bits (186), Expect = 2e-12, Method: Composition-based stats. Identities = 33/206 (16%), Positives = 69/206 (33%), Gaps = 26/206 (12%) Query: 9 RELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANA 68 + + L ++A + K N +D+ I+ L + A Sbjct: 892 KHAFVQLHRREVDAEHDGPAKTKSR---NSVKNFDKYDGPHTKTRALIEELLQHKAASEA 948 Query: 69 API------IVAYHFNSDLARLQKAFPQGRTLDKD----------PCTIQEWNEGK-IPL 111 P +V + S L ++ A + ++ E + + Sbjct: 949 NPSEPPYKSVVFSGWTSHLDLIELALNAAGIKFTRLDGSMSRTLRTSAMDKFREDNTVHV 1008 Query: 112 LFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLI 171 + + G GLNL G ++ V ++ Q I+R+ + G KR V I Sbjct: 1009 ILVSIMAGGLGLNLTAGNSVYVM-EPQYNPAAEAQAIDRV-----HRLGQKRPVRTVRYI 1062 Query: 172 AQNTIDELVLQRLRTKSTIQDLLLNA 197 +++ +E +L+ K + L ++ Sbjct: 1063 MRDSFEEKMLELQEKKMKLASLSMDG 1088 >gi|300708724|ref|XP_002996536.1| hypothetical protein NCER_100376 [Nosema ceranae BRL01] gi|239605845|gb|EEQ82865.1| hypothetical protein NCER_100376 [Nosema ceranae BRL01] Length = 594 Score = 76.1 bits (186), Expect = 2e-12, Method: Composition-based stats. Identities = 36/177 (20%), Positives = 67/177 (37%), Gaps = 19/177 (10%) Query: 31 KCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPI--IVAYHFNSDLARLQKAF 88 K + L V ++E +K++ +++ I+ I I+ H S + L Sbjct: 396 KNISLVGDNVEQTAMGMYREAATQKLEPVKMYIDTILEKNIKFIIFAHHLSMMEGLSSYL 455 Query: 89 PQGR-----------TLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSL 137 + T + + N G + + +C GL L ++VF L Sbjct: 456 ADKKVNFIKMDGSVITSHRQRLVNEFQNNGNVRVALLSVTACNTGLTLT-AAKLVVFAEL 514 Query: 138 WWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 +W+ Q +RI + G +V ++YL+ + T+DE V L K + L Sbjct: 515 YWNPGTLLQAEDRI-----HRIGQSSSVDIHYLVCKGTVDEYVWPILLKKLNVLQSL 566 >gi|2281697|gb|AAB64175.1| transcription factor [Mus musculus] Length = 1002 Score = 76.1 bits (186), Expect = 2e-12, Method: Composition-based stats. Identities = 33/180 (18%), Positives = 62/180 (34%), Gaps = 22/180 (12%) Query: 39 AVYYDEEKHWKEVHDEKIKALE-VIIEKANAAP---IIVAYHFNSDLARLQKAFPQGRTL 94 A D+E + KI AL +IE P +V F + L+ ++ + Sbjct: 812 ACDSDKESSMEWKSSSKINALMHALIELRTKDPNIKSLVVSQFTTFLSLIETPLKASGFV 871 Query: 95 ----------DKDPCTIQEWNEGKIPLLFAH--PASCGHGLNLQYGGNILVFFSLWWDLE 142 K +IQ + + + G GLNL + + W+ Sbjct: 872 FTRLDGSMAQKKRVESIQRFQNTEAGSPTISTVLKAGGVGLNL-CARSRVFLMDPAWNPA 930 Query: 143 EHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKET 202 Q +R + G K+ V + I +++++E +L+ TK + K + Sbjct: 931 AEDQCFDRC-----HRLGQKQEVIITKFIVKDSVEENMLKIQNTKRDLAAGAFATKKTDA 985 >gi|238570323|ref|XP_002386825.1| hypothetical protein MPER_14768 [Moniliophthora perniciosa FA553] gi|215439877|gb|EEB87755.1| hypothetical protein MPER_14768 [Moniliophthora perniciosa FA553] Length = 91 Score = 76.1 bits (186), Expect = 2e-12, Method: Composition-based stats. Identities = 18/91 (19%), Positives = 43/91 (47%), Gaps = 6/91 (6%) Query: 111 LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYL 170 + + G G+NL +I+V + W+ + Q ++R + G + V+V+ Sbjct: 4 IFLLTTRAGGLGINLTT-ADIVVLYDSDWNPQADLQAMDR-----AHRIGQTKQVYVFRF 57 Query: 171 IAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 I + +++E +L+R K + L++ + + Sbjct: 58 ITEGSVEERMLERAAQKLRLDQLVIQQGRTQ 88 >gi|311268976|ref|XP_003132292.1| PREDICTED: helicase ARIP4-like, partial [Sus scrofa] Length = 225 Score = 76.1 bits (186), Expect = 2e-12, Method: Composition-based stats. Identities = 23/106 (21%), Positives = 45/106 (42%), Gaps = 9/106 (8%) Query: 96 KDPCTIQEWNEGKIP---LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIG 152 + I ++N+ L + G+NL G N +V F W+ Q + Sbjct: 9 ERERLINQFNDPSNLTTWLFLLSTRAGCLGVNL-IGANRVVVFDASWNPCHDAQAV---- 63 Query: 153 VTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNAL 198 R + G K+ +Y L+A T+++ + R +K + D +++ L Sbjct: 64 -CRVYRYGQKKPCHIYRLVADFTLEKKIYDRQISKQGMSDRVVDDL 108 >gi|324522288|gb|ADY48028.1| SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1 [Ascaris suum] Length = 147 Score = 76.1 bits (186), Expect = 2e-12, Method: Composition-based stats. Identities = 22/119 (18%), Positives = 49/119 (41%), Gaps = 9/119 (7%) Query: 79 SDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLW 138 + RL + P +++ + + + G G+NL +I++ + Sbjct: 14 HEYCRLDGSTP---VMERQERINAFNASNDLFVFLLSTKAGGMGINLTAANHIILH-DID 69 Query: 139 WDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 ++ +Q +R + G K+ VFV LI+ +++E +L R K ++ + A Sbjct: 70 FNPYNDKQAEDRC-----HRMGQKKEVFVVRLISAGSVEEGMLSVARKKLELEKEVTGA 123 >gi|71001130|ref|XP_755246.1| SNF2 family helicase [Aspergillus fumigatus Af293] gi|66852884|gb|EAL93208.1| SNF2 family helicase, putative [Aspergillus fumigatus Af293] gi|159129330|gb|EDP54444.1| SNF2 family helicase, putative [Aspergillus fumigatus A1163] Length = 2115 Score = 76.1 bits (186), Expect = 2e-12, Method: Composition-based stats. Identities = 42/175 (24%), Positives = 69/175 (39%), Gaps = 13/175 (7%) Query: 35 LANGAVYYDEEKHWKEVHDEKIKALEVIIEKA-NAAPIIVAYHFNSDLARLQKAFPQGRT 93 + + A EE + K+ L I+++ N I+ F + KAF + Sbjct: 1920 MISAASLGFEEDRSTQYGGRKMDKLVEIVKEIPNQERAILFIQFPELIDVASKAFDLAKI 1979 Query: 94 LD-----KDPCTIQEWNEGKIPLLFAHPAS-CGHGLNLQYGGNILVFFSLWWDLEEHQ-Q 146 +D I+E+ +G + S GLNLQ N ++F S ++ Sbjct: 1980 THAVITARDTKKIEEFKKGNEKVAILQLGSETAAGLNLQC-TNHVIFLSPMLAETQYDYD 2038 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTK----STIQDLLLNA 197 + R + G R V VY+L+ + TID +LQ R K Q +L+ A Sbjct: 2039 SSMTQAIGRALRYGQTRRVHVYHLLMKRTIDVNILQERRGKILVERNGQAVLVKA 2093 >gi|164660184|ref|XP_001731215.1| hypothetical protein MGL_1398 [Malassezia globosa CBS 7966] gi|159105115|gb|EDP44001.1| hypothetical protein MGL_1398 [Malassezia globosa CBS 7966] Length = 713 Score = 76.1 bits (186), Expect = 3e-12, Method: Composition-based stats. Identities = 28/139 (20%), Positives = 50/139 (35%), Gaps = 21/139 (15%) Query: 44 EEKHWKEVHDEKIKALEVIIEKANAA---PIIVAYHFNSDL---ARLQK-------AFPQ 90 + ++ K+ LE + A I++ ++ L RL + Sbjct: 571 DRRNVAVGLSGKLAVLERFLTSMRAKTDDKIVLISNYTQTLDLFERLCRSRRWGFFRLDG 630 Query: 91 GRTLDKDPCTIQEWN--EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMI 148 ++K + +N EG + + G GLNL G N LV F W+ QQ + Sbjct: 631 TMNINKRQNLVDRFNNPEGSEFIFLLSSKAGGCGLNL-IGANRLVLFDPDWNPASDQQAL 689 Query: 149 ERIGVTRQRQAGFKRAVFV 167 R+ + G K++ Sbjct: 690 ARVW-----RDGQKKSCTY 703 >gi|302413912|ref|XP_003004788.1| transcription termination factor 2 [Verticillium albo-atrum VaMs.102] gi|261355857|gb|EEY18285.1| transcription termination factor 2 [Verticillium albo-atrum VaMs.102] Length = 868 Score = 76.1 bits (186), Expect = 3e-12, Method: Composition-based stats. Identities = 25/159 (15%), Positives = 56/159 (35%), Gaps = 26/159 (16%) Query: 59 LEVIIEKANAA---------PIIVAYHFNSDLARLQKAFPQGRT----------LDKDPC 99 LE +++ +V + + L ++ A + Sbjct: 693 LEDLLKSEAETAANPTLPPFKSVVFSSWTTHLDLIEMALDSVGITYSRLDGKMSRNARTK 752 Query: 100 TIQEW-NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQ 158 + E+ + I ++ + GLNL G N+ V ++ Q ++R+ + Sbjct: 753 AMDEFRDNPSIHVILVSIMAGSLGLNLTSGNNVYVM-EPQYNPAAEAQAVDRV-----HR 806 Query: 159 AGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 G KR V I +N+ +E +++ K + L ++ Sbjct: 807 LGQKRPVQTVRYIMRNSFEEKMIELQDKKKKLASLSMDG 845 >gi|258574015|ref|XP_002541189.1| predicted protein [Uncinocarpus reesii 1704] gi|237901455|gb|EEP75856.1| predicted protein [Uncinocarpus reesii 1704] Length = 256 Score = 76.1 bits (186), Expect = 3e-12, Method: Composition-based stats. Identities = 37/208 (17%), Positives = 70/208 (33%), Gaps = 36/208 (17%) Query: 13 CDLQGENIEAFNSA-SKTVKCLQLANGAVYY---------DEEKHWKEV-----HDEKIK 57 C G+ + S + L+ N V EE W + K+ Sbjct: 12 CSSSGQEFTFYQSLPALYNNILERQNHPVQISGNETSITDQEENDWISLAGHLMPSAKLT 71 Query: 58 ALEVII----EKANAAPIIVAYHFNSDLARLQK-AFPQG---------RTLDKDPCTIQE 103 A++ + + + + F + L QG + I+E Sbjct: 72 AIQSCVANWLTNSPGTKVTIFTQFRGMVRILSNMCIKQGWGHTTLTGNAPPSERHRDIEE 131 Query: 104 WN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFK 162 + + + +L + + G GLNL + + LWW+ QQ R+ + G Sbjct: 132 FRVDPTVRVLISSLKAGGTGLNLTM-ADKCILVDLWWNEAIEQQAFCRLF-----RYGQT 185 Query: 163 RAVFVYYLIAQNTIDELVLQRLRTKSTI 190 + V + + +N+ID+ + KST Sbjct: 186 KEVEIVRISVKNSIDDRIQLIQHEKSTS 213 >gi|237717088|ref|ZP_04547569.1| helicase [Bacteroides sp. D1] gi|294647817|ref|ZP_06725369.1| SNF2 family N-terminal domain protein [Bacteroides ovatus SD CC 2a] gi|229443071|gb|EEO48862.1| helicase [Bacteroides sp. D1] gi|292636725|gb|EFF55191.1| SNF2 family N-terminal domain protein [Bacteroides ovatus SD CC 2a] Length = 829 Score = 76.1 bits (186), Expect = 3e-12, Method: Composition-based stats. Identities = 33/182 (18%), Positives = 68/182 (37%), Gaps = 20/182 (10%) Query: 28 KTVKCLQL---ANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARL 84 + Q+ + D++ + +E + L + E + +++ + + Sbjct: 489 LLLMLSQMRMLCDSTYILDQKTRYDTKVEETLNILRNVFESGDEK-VVIFSQWERMTRLI 547 Query: 85 QKAFPQGRTLDK----------DPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVF 134 K + + E +F + GLNLQ +IL+ Sbjct: 548 AKELDVLGVRYEYLHGGIPSEARKNLTDNFTELPESRVFLSTDAGSTGLNLQV-ASILIN 606 Query: 135 FSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 L W+ +Q I RI + G K+ + V L+A TI+E +L L K+++ + + Sbjct: 607 LDLPWNPAVLEQRIARI-----YRIGQKKNIQVINLVASQTIEERMLSTLNFKTSLFEGI 661 Query: 195 LN 196 L+ Sbjct: 662 LD 663 >gi|123455548|ref|XP_001315517.1| SNF2 family N-terminal domain containing protein [Trichomonas vaginalis G3] gi|121898196|gb|EAY03294.1| SNF2 family N-terminal domain containing protein [Trichomonas vaginalis G3] Length = 1579 Score = 76.1 bits (186), Expect = 3e-12, Method: Composition-based stats. Identities = 30/161 (18%), Positives = 54/161 (33%), Gaps = 21/161 (13%) Query: 57 KALEVIIEKANAAPIIVAYHFNSDLARLQK-----------AFPQGRTLDKDPCTIQEWN 105 K LE + K +++ L L++ + ++K + Sbjct: 613 KVLEEL--KRENHKVLIFSQKVQLLHILREFCMLSGYNNELLIGEMSDIEKADAIDRYSK 670 Query: 106 EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 + + GLNL + + F W+ + Q R+ + G + V Sbjct: 671 NPDSFVFLISTRAGSEGLNLTV-ADTAIIFDPDWNPQNDLQAQARV-----HRIGQTQKV 724 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLLL--NALKKETIH 204 V LI NT + + R + K + LL NA K + I Sbjct: 725 DVLRLITYNTYEHEMFIRAQKKLGLWMDLLGENATKNDGIQ 765 >gi|331225801|ref|XP_003325571.1| hypothetical protein PGTG_07404 [Puccinia graminis f. sp. tritici CRL 75-36-700-3] gi|309304561|gb|EFP81152.1| hypothetical protein PGTG_07404 [Puccinia graminis f. sp. tritici CRL 75-36-700-3] Length = 371 Score = 76.1 bits (186), Expect = 3e-12, Method: Composition-based stats. Identities = 31/151 (20%), Positives = 58/151 (38%), Gaps = 22/151 (14%) Query: 55 KIKALEVIIEKANAA--PIIVAYHFNSDLARL----QKAFPQGRTLDKDPCTIQEWN--- 105 K K L+ ++E+ A +++ + L Q+ FP+ LD + + Sbjct: 44 KWKVLKPLLEQWKKAQFKVLLFSQSTKMMDILEYWLQQDFPEFVRLDGSVAIRERFKRVD 103 Query: 106 ----EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGF 161 + + A + G GLNL ++ W+ Q ++R+ + G Sbjct: 104 EFQTDPSKFIFLASIKAAGVGLNLTAANKVV----PSWNPSHDAQAMDRVV-----RIGQ 154 Query: 162 KRAVFVYYLIAQNTIDELVLQRLRTKSTIQD 192 KR V LI+ T +EL+ R K + + Sbjct: 155 KREVECIRLISSGTTEELIYHRQLYKQGLSE 185 >gi|206599758|ref|YP_002241947.1| gp54 [Mycobacterium phage Gumball] gi|206282972|gb|ACI06426.1| gp52 [Mycobacterium phage Gumball] Length = 647 Score = 76.1 bits (186), Expect = 3e-12, Method: Composition-based stats. Identities = 31/230 (13%), Positives = 74/230 (32%), Gaps = 39/230 (16%) Query: 1 MKQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYD-------EEKHWKEVHD 53 +K Y ++ L+ + A ++ + Q+A Y D E+ + Sbjct: 412 LKAYQAMVKDAAVKLESGVLSANGVLAEMTRLKQMACS--YGDLAIAPTGEQTFRPSLPS 469 Query: 54 EKIKALEVIIEKAN--------AAPIIVAYHFNSDLAR---------LQKAFPQGRTLDK 96 K L ++ +IVA F L ++ G T +K Sbjct: 470 NKFDYLVDLLSDRGIGSGEFDPTGKVIVASQFTKLLNLFYAELNKLGIKCHLLTGATSEK 529 Query: 97 DP-CTIQEWNEGKIP-----LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 + + KI + + + G + L + +V W+ ++ +Q+ +R Sbjct: 530 ERVRMADAFQNTKIGDDTPHVFLLNTIAGGASITL-DAADDVVTLDETWNKDDQEQVEDR 588 Query: 151 IGVTRQRQAGF-KRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 + V ++ L + +I+E + + +++ + Sbjct: 589 -----AHRISRTDHTVTIHNLRSLGSIEERIATSAFAQERNIKSIIDGAR 633 >gi|322493268|emb|CBZ28553.1| DNA repair protein-like protein [Leishmania mexicana MHOM/GT/2001/U1103] Length = 909 Score = 76.1 bits (186), Expect = 3e-12, Method: Composition-based stats. Identities = 34/164 (20%), Positives = 61/164 (37%), Gaps = 23/164 (14%) Query: 44 EEKHWKEVHDEKIKALEVIIEKAN-AAPIIVAYHFNSDLARLQKAFPQGR---------- 92 + +W K + L I ++V F + L R + + Q Sbjct: 698 DMNNWSLQLSSKTQYLIDTIRSLPVEDKVVVFSTFLTYL-RCAQHWLQAAGVSCALYSGS 756 Query: 93 -TLDKDPCTIQEWNEGKIP----LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQM 147 T+ + ++ +++ P +L A +SCG GLNL N W+ +Q Sbjct: 757 MTMKQRQSLLELFHDAARPGSPRVLLATISSCGVGLNLTC-ANHCFLMEPSWNPGTEEQA 815 Query: 148 IERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQ 191 + RI + G + V LIA+ TI++ + Q K + Sbjct: 816 LNRI-----YRIGQTKPVTFTKLIAEGTIEQNISQLCERKRALS 854 >gi|294806211|ref|ZP_06765058.1| SNF2 family N-terminal domain protein [Bacteroides xylanisolvens SD CC 1b] gi|294446467|gb|EFG15087.1| SNF2 family N-terminal domain protein [Bacteroides xylanisolvens SD CC 1b] Length = 827 Score = 76.1 bits (186), Expect = 3e-12, Method: Composition-based stats. Identities = 33/182 (18%), Positives = 68/182 (37%), Gaps = 20/182 (10%) Query: 28 KTVKCLQL---ANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARL 84 + Q+ + D++ + +E + L + E + +++ + + Sbjct: 487 LLLMLSQMRMLCDSTYILDQKTRYDTKVEETLNILRNVFESGDEK-VVIFSQWERMTRLI 545 Query: 85 QKAFPQGRTLDK----------DPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVF 134 K + + E +F + GLNLQ +IL+ Sbjct: 546 AKELDVLGVRYEYLHGGIPSEARKNLTDNFTELPESRVFLSTDAGSTGLNLQV-ASILIN 604 Query: 135 FSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 L W+ +Q I RI + G K+ + V L+A TI+E +L L K+++ + + Sbjct: 605 LDLPWNPAVLEQRIARI-----YRIGQKKNIQVINLVASQTIEERMLSTLNFKTSLFEGI 659 Query: 195 LN 196 L+ Sbjct: 660 LD 661 >gi|302144116|emb|CBI23221.3| unnamed protein product [Vitis vinifera] Length = 135 Score = 76.1 bits (186), Expect = 3e-12, Method: Composition-based stats. Identities = 23/136 (16%), Positives = 51/136 (37%), Gaps = 15/136 (11%) Query: 62 IIEKANAAPIIVAYHFNSDLARLQKAFPQ---------GRTLDKDPCTIQEWNEGKIPLL 112 ++E +A +V F S L + + + G ++ + +N+ +L Sbjct: 1 MVETDGSAKALVFSQFVSFLDLIDYSLQKSQINCVKLVGDVAARNALVSRFFNDSDCRIL 60 Query: 113 FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIA 172 + G LNL + + ++ Q + + G +AV + + Sbjct: 61 LTTSEAGGLSLNLSV-ASYVFLMEPFFSSAVELQACD-----GVYRIGQHKAVRIVKFVT 114 Query: 173 QNTIDELVLQRLRTKS 188 +NTI+E +L+ K+ Sbjct: 115 ENTIEERILELQAKKN 130 >gi|71001976|ref|XP_755669.1| SNF2 family helicase/ATPase [Aspergillus fumigatus Af293] gi|66853307|gb|EAL93631.1| SNF2 family helicase/ATPase, putative [Aspergillus fumigatus Af293] gi|159129727|gb|EDP54841.1| SNF2 family helicase/ATPase, putative [Aspergillus fumigatus A1163] Length = 1200 Score = 76.1 bits (186), Expect = 3e-12, Method: Composition-based stats. Identities = 32/178 (17%), Positives = 63/178 (35%), Gaps = 28/178 (15%) Query: 50 EVHDEKIKAL-EVIIEKANAAPII---------VAYHFNSDLARLQKAFPQGR------- 92 E K KAL + E A + + V + S L ++ A Sbjct: 1016 EGPHTKTKALLAHLSESAEESKRLNAEPPIKSVVFSAWTSHLDLIEIALKDRGMTGFTRL 1075 Query: 93 ----TLDKDPCTIQEW-NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQM 147 +L ++++ +L A + G GLNL + + ++ Q Sbjct: 1076 DGTMSLAARNKALEDFHTNDNTTILLATIGAGGVGLNLTSASKVYIM-EPQYNPAAVAQA 1134 Query: 148 IERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIHV 205 I+R+ + G R V I + +I+E + + + K + D+ +N K + + Sbjct: 1135 IDRV-----HRLGQTREVTTVQFIMKGSIEEKIFELAKKKQQLADMSMNRGKLDKKEI 1187 >gi|188536006|ref|NP_001120938.1| SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1 [Danio rerio] gi|221222756|sp|B2ZFP3|SMAL1_DANRE RecName: Full=SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1; AltName: Full=HepA-related protein; AltName: Full=Sucrose nonfermenting protein 2-like 1 gi|187373311|gb|ACD03327.1| Smarcal1 [Danio rerio] Length = 807 Score = 76.1 bits (186), Expect = 3e-12, Method: Composition-based stats. Identities = 34/206 (16%), Positives = 73/206 (35%), Gaps = 25/206 (12%) Query: 8 QRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHW-----KEVHDEKIKALEVI 62 ++ + + I + A+ +LA G +EK + KI+A+ Sbjct: 561 KQRKVVTVTTDGINSRTKAALNAAARELAKGYHNKSQEKEALLVFFNHTAEAKIRAIMEY 620 Query: 63 IEKA---NAAPIIVAYHFNSDLARLQKAF---------PQGRTLDKDPCTI-QEWNEGKI 109 I +V H L + K G T + + + + + Sbjct: 621 ISDMLECGREKFLVFAHHKLVLDSITKELGEKSISFIRIDGSTPSAERQLLCERFQASQQ 680 Query: 110 P-LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVY 168 + + GL L + ++VF L+W+ Q +R+ + G V ++ Sbjct: 681 SCVAVLSITAANMGLTL-HSAALVVFAELFWNPGVLIQAEDRV-----HRIGQTSNVDIH 734 Query: 169 YLIAQNTIDELVLQRLRTKSTIQDLL 194 YL+A+ T D+ + ++ K + + + Sbjct: 735 YLVAKGTADDYLWPMIQAKMNVLEQV 760 >gi|257481637|ref|ZP_05635678.1| SNF2-related:helicase, C-terminal [Pseudomonas syringae pv. tabaci ATCC 11528] Length = 629 Score = 76.1 bits (186), Expect = 3e-12, Method: Composition-based stats. Identities = 29/154 (18%), Positives = 58/154 (37%), Gaps = 18/154 (11%) Query: 55 KIKALEVIIEKAN-AAPIIVAYHFNSDLARLQKAFPQGRT----------LDKDPCTIQE 103 K++ L ++ + + +I+ + +A L++ + K I Sbjct: 482 KVRILADLMAELDVDDKVILFCEYQESVATLREHCLKMGVGCVTLVGSDSPKKRQKAIDA 541 Query: 104 WN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFK 162 + + + ++ G G NL N + F L W Q +R + G Sbjct: 542 FQQDPDCRVFIGTRSAAGTGYNLT-AANYVFFLGLPWTPGLQDQAEDR-----AYRNGQL 595 Query: 163 RAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 R V V +A++TID+ + Q L K + L++ Sbjct: 596 RVVVVKIPLAEDTIDQQLWQMLMDKRALASDLID 629 >gi|328863835|gb|EGG12934.1| hypothetical protein MELLADRAFT_87196 [Melampsora larici-populina 98AG31] Length = 347 Score = 75.7 bits (185), Expect = 3e-12, Method: Composition-based stats. Identities = 15/143 (10%), Positives = 52/143 (36%), Gaps = 17/143 (11%) Query: 64 EKANAAPIIVAYHFNSDLARL-----------QKAFPQGRTLDKDPCTIQEWNEGKIPLL 112 + ++ + S + + ++ T ++ + + Sbjct: 174 KSHGGGKSVIYTQWKSFIDWIIMAFDNSGITYRQLHGDQSTFERTSQLNSFTKDPNVEAF 233 Query: 113 FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIA 172 + G GLN+ + + W+ + QQ ++R+ + G ++V V++++ Sbjct: 234 VVSIEAGGVGLNMTC-ADEVYLMDAHWNPQVVQQAVDRL-----HRIGQAKSVRVFHVVT 287 Query: 173 QNTIDELVLQRLRTKSTIQDLLL 195 +I++ + + K+ + ++ Sbjct: 288 GQSIEQHLYNVQKRKAALAKRVI 310 >gi|319651521|ref|ZP_08005649.1| DNA/RNA helicase protein [Bacillus sp. 2_A_57_CT2] gi|317396836|gb|EFV77546.1| DNA/RNA helicase protein [Bacillus sp. 2_A_57_CT2] Length = 562 Score = 75.7 bits (185), Expect = 3e-12, Method: Composition-based stats. Identities = 31/151 (20%), Positives = 62/151 (41%), Gaps = 15/151 (9%) Query: 53 DEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRT-----LDKDPCTIQEWNEG 107 + K + II+ N +I+ + + LQ Q ++W Sbjct: 358 NSKAQKALEIIQNINDK-VIIFTEYRATQMYLQWFLKQYGITSVPFRGGFKRGKKDWMRE 416 Query: 108 ---KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA 164 K + + G G+NLQ+ N ++ F L W+ +Q I RI + G ++ Sbjct: 417 LFQKNAQVLIATEAGGEGINLQF-CNHIINFDLPWNPMRLEQRIGRI-----HRLGQEKD 470 Query: 165 VFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 V +Y ++T++E V++ L K + + ++ Sbjct: 471 VMIYNFATKDTVEEHVMKLLYEKIHLFEKVI 501 >gi|126665998|ref|ZP_01736978.1| helicase/SNF2 family domain protein [Marinobacter sp. ELB17] gi|126629320|gb|EAZ99937.1| helicase/SNF2 family domain protein [Marinobacter sp. ELB17] Length = 942 Score = 75.7 bits (185), Expect = 3e-12, Method: Composition-based stats. Identities = 31/169 (18%), Positives = 68/169 (40%), Gaps = 23/169 (13%) Query: 28 KTVKCLQLANGA-VYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQK 86 + +L + A D+++ + D+ I I+ + +++ + + A +++ Sbjct: 496 ELEHLDELISEAGALRDDDRKLQGFADQLIAK---ILTPNSKEKVLIFTEYRATQAYIRE 552 Query: 87 AFPQ------GRTLD------KDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVF 134 + ++ + I + EG + G G+NLQ +I+V Sbjct: 553 ILEKRFGEGSVELINGSMPHAQRRDAIARFEEGAN--FLVSTEAGGEGINLQRKCHIMVN 610 Query: 135 FSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQR 183 + L W+ Q I R+ + G K+ V V+ L + +T DE V++ Sbjct: 611 YDLPWNPMRLVQRIGRL-----YRYGQKKRVVVFNLHSPDTADEQVMEL 654 >gi|9627784|ref|NP_054071.1| global transactivator-like protein [Autographa californica nucleopolyhedrovirus] gi|1170083|sp|P41447|GTA_NPVAC RecName: Full=Probable global transactivator; AltName: Full=ATP-dependent helicase GTA gi|559111|gb|AAA66672.1| global transactivator-like protein [Autographa californica nucleopolyhedrovirus] Length = 506 Score = 75.7 bits (185), Expect = 3e-12, Method: Composition-based stats. Identities = 41/237 (17%), Positives = 81/237 (34%), Gaps = 54/237 (22%) Query: 3 QYHKFQRELYCDLQGENIEAF------NSAS----------KTVKCLQLANGAVYYDEEK 46 Y K + C+ + ++A N+ S +K Q+ K Sbjct: 266 LYDKLK----CESEEAYVKAVAARENENALSRLQQMQHVLWLILKLRQICCHPYLAMHGK 321 Query: 47 HWKEVHDEK------------IKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQ---G 91 + E +D + ++ I+ +N I+V + L + F Q Sbjct: 322 NILETNDCFKMDYMSSKCKRVLDLVDDILNTSNDKIILV-SQWVEYLKIFENFFKQKNIA 380 Query: 92 RTLDKDPCTIQE-------WNEGKIP---LLFAHPASCGHGLNLQYGGNILVFFSLWWDL 141 + +++ +N+ +L G GLNL GGN +V W+ Sbjct: 381 TLMYTGQLKVEDRILAETTFNDAANTQHRILLLSIKCGGVGLNL-IGGNHIVMLEPHWNP 439 Query: 142 EEHQQMIERIGVTRQRQAGFKRAVFVYYL--IAQNTIDELVLQRLRTKSTIQDLLLN 196 + Q +RI + G + +VY + + N+I++ + QR K + + Sbjct: 440 QIELQAQDRIS-----RMGQTKNTYVYKMLNVEDNSIEKYIKQRQDKKIAFVNTVFE 491 >gi|225432202|ref|XP_002269671.1| PREDICTED: hypothetical protein [Vitis vinifera] gi|297736823|emb|CBI26024.3| unnamed protein product [Vitis vinifera] Length = 677 Score = 75.7 bits (185), Expect = 3e-12, Method: Composition-based stats. Identities = 36/210 (17%), Positives = 78/210 (37%), Gaps = 25/210 (11%) Query: 1 MKQYHKFQRELYCDLQGENIEAFNSASKTVKCLQ--LANGAVYYDEEKHWKEVHDEKIKA 58 MKQ + REL ++++K + L N +Y D + + Sbjct: 434 MKQINALFRELEVVKSKIKASKSKEEAESLKFSEKNLIN-KIYTDS---AQAKIPAVLDY 489 Query: 59 LEVIIEKANAAPIIVAYHFNSDLARLQKAFPQ---------GRTLDKDPCT-IQEWNEGK 108 L ++E ++ H + + + + G T + ++ E Sbjct: 490 LGTVVEA--GCKFLIFAHHQPMIDSIFQFLVKKKVGCIRIDGSTPSSSRQAFVTDFQEKD 547 Query: 109 -IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFV 167 I + G GL L + ++F L W + Q +R+ + G +V + Sbjct: 548 TIKAAVLSIKAGGVGLTLT-AASTVIFAELSWTPGDLIQAEDRV-----HRIGQVSSVNI 601 Query: 168 YYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 +YL+A +T+D+++ +++K +L+ Sbjct: 602 HYLLANDTVDDIIWDVVQSKLENLGQMLDG 631 >gi|109522826|ref|YP_655246.1| gp50 [Mycobacterium phage PBI1] gi|189043204|ref|YP_001936143.1| gp52 [Mycobacterium phage Adjutor] gi|206599671|ref|YP_002241550.1| gp52 [Mycobacterium phage Butterscotch] gi|206599847|ref|YP_002241467.1| gp53 [Mycobacterium phage Troll4] gi|88910539|gb|ABD58466.1| gp50 [Mycobacterium phage PBI1] gi|188090855|gb|ACD49637.1| gp52 [Mycobacterium phage Adjutor] gi|206282853|gb|ACI06340.1| gp52 [Mycobacterium phage Butterscotch] gi|206283089|gb|ACI06514.1| gp53 [Mycobacterium phage Troll4] Length = 647 Score = 75.7 bits (185), Expect = 3e-12, Method: Composition-based stats. Identities = 31/230 (13%), Positives = 74/230 (32%), Gaps = 39/230 (16%) Query: 1 MKQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYD-------EEKHWKEVHD 53 +K Y ++ L+ + A ++ + Q+A Y D E+ + Sbjct: 412 LKAYQAMVKDAAVKLESGILSANGVLAEMTRLKQMACS--YGDLAIAPTGEQTFRPSLPS 469 Query: 54 EKIKALEVIIEKAN--------AAPIIVAYHFNSDLAR---------LQKAFPQGRTLDK 96 K L ++ +IVA F L ++ G T +K Sbjct: 470 NKFDYLVDLLSDRGIGSGEFDPTGKVIVASQFTKLLNLFYTELNKLGIRCHLLTGATSEK 529 Query: 97 DP-CTIQEWNEGKIP-----LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 + + KI + + + G + L + +V W+ ++ +Q+ +R Sbjct: 530 ERVRMADAFQNTKIGDDTPHVFLLNTIAGGASITL-DAADDVVTLDETWNKDDQEQVEDR 588 Query: 151 IGVTRQRQAGF-KRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 + V ++ L + +I+E + + +++ + Sbjct: 589 -----AHRISRTDHTVTIHNLRSLGSIEERIATSAFAQERNIKSIIDGAR 633 >gi|326333794|ref|ZP_08200027.1| SNF2 domain protein [Nocardioidaceae bacterium Broad-1] gi|325948376|gb|EGD40483.1| SNF2 domain protein [Nocardioidaceae bacterium Broad-1] Length = 905 Score = 75.7 bits (185), Expect = 3e-12, Method: Composition-based stats. Identities = 34/156 (21%), Positives = 62/156 (39%), Gaps = 17/156 (10%) Query: 49 KEVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQKAFPQ--------GRTLDKDP 98 + K++ L I+ +A N +IV HF L L P ++ Sbjct: 706 QGTSSAKVERLIEIVGEAEENGRRVIVFSHFRKVLDDLVTLLPGEVFGPLTGSVPAEERQ 765 Query: 99 CTIQEWNE-GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 + E++ G +L + G GLN+Q +++V Q I R R Sbjct: 766 QMVDEFSAAGHGAVLVTQIVAGGVGLNIQ-AASVVVICEPQLKPTIEWQAIAR-----AR 819 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDL 193 + G ++V V+ L+++ +D+ V L K+ + D Sbjct: 820 RMGQLQSVQVHRLLSEVGVDQRVHDILAAKAELFDD 855 >gi|313227060|emb|CBY22207.1| unnamed protein product [Oikopleura dioica] Length = 402 Score = 75.7 bits (185), Expect = 3e-12, Method: Composition-based stats. Identities = 19/102 (18%), Positives = 48/102 (47%), Gaps = 7/102 (6%) Query: 96 KDPCTIQEWNEGKIP-LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 + I+++ + +P +L + G+N+ +V F + W+ Q + RI Sbjct: 11 EREKIIKKFTDFPLPSILIISTRAGCVGINVT-AATRVVMFDVSWNPVHDAQAVCRI--- 66 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + G ++A F+Y L+A ++ + +R K+++ +++ Sbjct: 67 --YRIGQEKACFIYRLVADGCMERAIYERQVAKTSLSRRIVD 106 >gi|313218173|emb|CBY41468.1| unnamed protein product [Oikopleura dioica] Length = 402 Score = 75.7 bits (185), Expect = 3e-12, Method: Composition-based stats. Identities = 19/102 (18%), Positives = 48/102 (47%), Gaps = 7/102 (6%) Query: 96 KDPCTIQEWNEGKIP-LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 + I+++ + +P +L + G+N+ +V F + W+ Q + RI Sbjct: 11 EREKIIKKFTDFPLPSILIISTRAGCVGINVT-AATRVVMFDVSWNPVHDAQAVCRI--- 66 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + G ++A F+Y L+A ++ + +R K+++ +++ Sbjct: 67 --YRIGQEKACFIYRLVADGCMERAIYERQVAKTSLSRRIVD 106 >gi|262405856|ref|ZP_06082406.1| helicase [Bacteroides sp. 2_1_22] gi|262356731|gb|EEZ05821.1| helicase [Bacteroides sp. 2_1_22] Length = 801 Score = 75.7 bits (185), Expect = 3e-12, Method: Composition-based stats. Identities = 33/182 (18%), Positives = 68/182 (37%), Gaps = 20/182 (10%) Query: 28 KTVKCLQL---ANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARL 84 + Q+ + D++ + +E + L + E + +++ + + Sbjct: 461 LLLMLSQMRMLCDSTYILDQKTRYDTKVEETLNILRNVFESGDEK-VVIFSQWERMTRLI 519 Query: 85 QKAFPQGRTLDK----------DPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVF 134 K + + E +F + GLNLQ +IL+ Sbjct: 520 AKELDVLGVRYEYLHGGIPSEARKNLTDNFTELPESRVFLSTDAGSTGLNLQV-ASILIN 578 Query: 135 FSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 L W+ +Q I RI + G K+ + V L+A TI+E +L L K+++ + + Sbjct: 579 LDLPWNPAVLEQRIARI-----YRIGQKKNIQVINLVASQTIEERMLSTLNFKTSLFEGI 633 Query: 195 LN 196 L+ Sbjct: 634 LD 635 >gi|297852448|ref|XP_002894105.1| SNF2 domain-containing protein [Arabidopsis lyrata subsp. lyrata] gi|297339947|gb|EFH70364.1| SNF2 domain-containing protein [Arabidopsis lyrata subsp. lyrata] Length = 673 Score = 75.7 bits (185), Expect = 3e-12, Method: Composition-based stats. Identities = 26/169 (15%), Positives = 62/169 (36%), Gaps = 22/169 (13%) Query: 40 VYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRT------ 93 +Y D + L ++E +V H S L + + + + Sbjct: 461 IYTDSAGAKIP---AVLDYLGTVLEA--GCKFLVFAHHQSMLDAIHQFLKKKKVGCIRID 515 Query: 94 ----LDKDPCTIQEWNE-GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMI 148 + ++ + +I + G G+ L + ++F L W + Q Sbjct: 516 GSTPASSRQALVSDFQDKDEIKAAVLSIRAAGVGITLT-AASTVIFAELAWTPGDLIQAE 574 Query: 149 ERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 +R + G +V ++YL+A +T+D+++ +++K +L+ Sbjct: 575 DR-----AHRIGQVSSVNIHYLLANDTVDDIIWDVVQSKLDNLGQMLDG 618 >gi|326476932|gb|EGE00942.1| chromodomain helicase DNA binding protein [Trichophyton tonsurans CBS 112818] Length = 423 Score = 75.7 bits (185), Expect = 3e-12, Method: Composition-based stats. Identities = 18/105 (17%), Positives = 43/105 (40%), Gaps = 8/105 (7%) Query: 96 KDPCTIQEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGV 153 K I +N + + G G+NL + ++ ++ + Q + R Sbjct: 30 KKQKNIDAYNAPGSEYFAFLLSTRAGGVGINL-ATADTVIILDPDFNPHQDIQALSR--- 85 Query: 154 TRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNAL 198 + G K+ V V+ L+ + + +E ++Q + K + +L+ + Sbjct: 86 --AHRIGQKKKVMVFQLMTRGSAEEKIMQIGKKKMALDHVLIERM 128 >gi|13543768|gb|AAH06035.1| Chd4 protein [Mus musculus] Length = 829 Score = 75.7 bits (185), Expect = 3e-12, Method: Composition-based stats. Identities = 17/107 (15%), Positives = 40/107 (37%), Gaps = 8/107 (7%) Query: 86 KAFPQGRTLDKDPCTIQEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEE 143 + G T + I +N + + G G+NL + ++ + W+ Sbjct: 1 ERIDGGITGNMRQEAIDRFNAPGAQQFCFLLSTRAGGLGINL-ATADTVIIYDSDWNPHN 59 Query: 144 HQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 Q +R + G + V +Y + + +++E + Q + K + Sbjct: 60 DIQA-----FSRAHRIGQNKKVMIYRFVTRASVEERITQVAKKKMML 101 >gi|295674753|ref|XP_002797922.1| conserved hypothetical protein [Paracoccidioides brasiliensis Pb01] gi|226280572|gb|EEH36138.1| conserved hypothetical protein [Paracoccidioides brasiliensis Pb01] Length = 1797 Score = 75.7 bits (185), Expect = 3e-12, Method: Composition-based stats. Identities = 26/142 (18%), Positives = 58/142 (40%), Gaps = 17/142 (11%) Query: 68 AAPIIVAYHFNSDLARLQKAFPQ-GRTLDK---------DPCTIQEWNEGK-IPLLFAHP 116 +++ H L L+ Q GRT + + + +N G + Sbjct: 1356 GDKVLLFSHSIPTLNYLEHVLRQAGRTYSRLDGKTPIATRQISTKNFNSGSYTQVYLIST 1415 Query: 117 ASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTI 176 + G GLN+ G N ++ F ++ +Q + R + G ++ VFVY +A T Sbjct: 1416 RAGGLGLNI-PGANRVIIFDFQFNPTWEEQAVGR-----AYRLGQRKPVFVYRFLAGGTF 1469 Query: 177 DELVLQRLRTKSTIQDLLLNAL 198 ++++ + K+ + +++ + Sbjct: 1470 EDIMHNKAVFKTQLSYRVIDKM 1491 >gi|161528234|ref|YP_001582060.1| SNF2-related protein [Nitrosopumilus maritimus SCM1] gi|160339535|gb|ABX12622.1| SNF2-related protein [Nitrosopumilus maritimus SCM1] Length = 574 Score = 75.7 bits (185), Expect = 3e-12, Method: Composition-based stats. Identities = 27/100 (27%), Positives = 46/100 (46%), Gaps = 6/100 (6%) Query: 97 DPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 I ++ +G+ L+ A + G+NL ++F L W H+Q +R+ Sbjct: 455 RQDQIDKFQKGESKLMIAGIRAGNVGINLTR-AKYVIFAELDWSPAIHRQAEDRL----- 508 Query: 157 RQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + G + VF YYLI T+D+ V L KS D +++ Sbjct: 509 HRIGQQNTVFAYYLIGNGTLDDHVANVLVDKSYEIDEIMD 548 >gi|119189989|ref|XP_001245601.1| hypothetical protein CIMG_05042 [Coccidioides immitis RS] Length = 1056 Score = 75.7 bits (185), Expect = 3e-12, Method: Composition-based stats. Identities = 32/178 (17%), Positives = 65/178 (36%), Gaps = 28/178 (15%) Query: 50 EVHDEKIKALEV----IIEKANAAP------IIVAYHFNSDLARLQKAFPQGRT------ 93 E K KAL +E++ P +V + S L ++ A Sbjct: 872 EGPHTKTKALISHLLGTVEESKHNPDQPPIKSVVFSSWTSHLDLIEIALQDNGIRGFTRL 931 Query: 94 -----LDKDPCTIQEWNEGK-IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQM 147 L + + ++ + I +L A + G GLNL + + ++ Q Sbjct: 932 DGTMALKQRNVALDKFRDDDNITVLLATLGAGGVGLNLTSASRVYIM-EPQYNPAAVAQA 990 Query: 148 IERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIHV 205 ++R+ + G R V I + +I+E + + + K + ++ LN K + + Sbjct: 991 VDRV-----HRLGQTREVTTVQFIMKESIEEKIAELAKKKQKLANMSLNRGKSDKREM 1043 >gi|50954487|ref|YP_061775.1| ATP-dependent RNA helicase [Leifsonia xyli subsp. xyli str. CTCB07] gi|50950969|gb|AAT88670.1| ATP-dependent RNA helicase [Leifsonia xyli subsp. xyli str. CTCB07] Length = 721 Score = 75.7 bits (185), Expect = 3e-12, Method: Composition-based stats. Identities = 25/102 (24%), Positives = 42/102 (41%), Gaps = 7/102 (6%) Query: 97 DPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTR 155 I +N + + + + G GLNLQ N +V L W E Q I+R+ Sbjct: 601 RQKEIDAFNTDPGVSVAVCSLTAAGVGLNLQAASN-VVLAELSWTAAEQTQAIDRV---- 655 Query: 156 QRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + G + V + +IA TID + + + K + L+ Sbjct: 656 -HRIGQEEPVTAWRIIAAQTIDSKIAELIDAKQGLAARALDG 696 >gi|116196398|ref|XP_001224011.1| hypothetical protein CHGG_04797 [Chaetomium globosum CBS 148.51] gi|88180710|gb|EAQ88178.1| hypothetical protein CHGG_04797 [Chaetomium globosum CBS 148.51] Length = 1110 Score = 75.7 bits (185), Expect = 3e-12, Method: Composition-based stats. Identities = 25/136 (18%), Positives = 51/136 (37%), Gaps = 17/136 (12%) Query: 72 IVAYHFNSDLARLQKAFPQGR----------TLDKDPCTIQEWNEG-KIPLLFAHPASCG 120 +V + S L +Q A T + + + + ++ + G Sbjct: 955 VVFSGWTSHLDLIQIALDNAGITYTRLDGKMTRTARNAAMDAFRDDHSVQVILVSIMAGG 1014 Query: 121 HGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELV 180 GLNL G ++ V ++ Q ++R+ + G RAV I +++ +E + Sbjct: 1015 LGLNLTAGNSVYVM-EPQFNPAAEAQAVDRV-----HRLGQTRAVRTVRFIMKDSFEEKM 1068 Query: 181 LQRLRTKSTIQDLLLN 196 LQ K + L ++ Sbjct: 1069 LQLQDKKKKLASLSMD 1084 >gi|289647486|ref|ZP_06478829.1| SNF2-related:helicase, C-terminal [Pseudomonas syringae pv. aesculi str. 2250] Length = 564 Score = 75.7 bits (185), Expect = 3e-12, Method: Composition-based stats. Identities = 29/154 (18%), Positives = 58/154 (37%), Gaps = 18/154 (11%) Query: 55 KIKALEVIIEKAN-AAPIIVAYHFNSDLARLQKAFPQGRT----------LDKDPCTIQE 103 K++ L ++ + + +I+ + +A L++ + K I Sbjct: 402 KVRILADLMAELDVDDKVILFCEYQESVATLREHCLKMGVGCVTLIGSDSPKKRQKAIDA 461 Query: 104 WN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFK 162 + + + ++ G G NL N + F L W Q +R + G Sbjct: 462 FQQDPDCRVFIGTRSAAGTGYNLT-AANYVFFLGLPWTPGLQDQAEDR-----AYRNGQL 515 Query: 163 RAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 R V V +A++TID+ + Q L K + L++ Sbjct: 516 RVVVVKIPLAEDTIDQQLWQMLMDKRALASDLID 549 >gi|170039496|ref|XP_001847569.1| conserved hypothetical protein [Culex quinquefasciatus] gi|167863046|gb|EDS26429.1| conserved hypothetical protein [Culex quinquefasciatus] Length = 959 Score = 75.7 bits (185), Expect = 3e-12, Method: Composition-based stats. Identities = 19/89 (21%), Positives = 41/89 (46%), Gaps = 6/89 (6%) Query: 111 LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYL 170 ++ + G GLNL G N L+ L W+ + Q +R+ + G K+ V+++ Sbjct: 860 IMLLSLTAGGVGLNL-VGANHLMLLDLHWNPQLEAQAQDRV-----YRVGQKKPVYIWKF 913 Query: 171 IAQNTIDELVLQRLRTKSTIQDLLLNALK 199 + +T+++ ++ + K + L K Sbjct: 914 MCTDTVEQKIMGLQQKKLDLATQALTGTK 942 >gi|149182929|ref|ZP_01861387.1| DNA/RNA helicase (SNF2 family) protein [Bacillus sp. SG-1] gi|148849378|gb|EDL63570.1| DNA/RNA helicase (SNF2 family) protein [Bacillus sp. SG-1] Length = 565 Score = 75.7 bits (185), Expect = 3e-12, Method: Composition-based stats. Identities = 38/201 (18%), Positives = 79/201 (39%), Gaps = 23/201 (11%) Query: 7 FQRELYCDLQGENIEAFNSASKTVK-CLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEK 65 QRE + N +T + QL N ++ + + + +AL+ II+ Sbjct: 312 LQREACSSREAVFYTLKNMLQRTDQPSAQLTNSVNALMKKVEAVQTNSKAQEALK-IIQS 370 Query: 66 ANAAPIIVAYHFNSDLARLQKAFPQGRT-----LDKDPCTIQEW------NEGKIPLLFA 114 N +I+ + + LQ Q ++W N ++ Sbjct: 371 VNDK-VIIFTEYRATQLYLQWFLKQNGITSVPFRGGFKRGKKDWMRELFKNHAQV---LI 426 Query: 115 HPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQN 174 + G G+NLQ+ + ++ F L W+ +Q I R+ + G V +Y ++ Sbjct: 427 ATEAGGEGINLQF-CHHIINFDLPWNPMRLEQRIGRV-----HRLGQTEDVHIYNFATRD 480 Query: 175 TIDELVLQRLRTKSTIQDLLL 195 T++E +L+ L K ++ + ++ Sbjct: 481 TVEEHILKLLYEKISLFEKVI 501 >gi|47216738|emb|CAG01012.1| unnamed protein product [Tetraodon nigroviridis] Length = 381 Score = 75.7 bits (185), Expect = 3e-12, Method: Composition-based stats. Identities = 28/143 (19%), Positives = 54/143 (37%), Gaps = 17/143 (11%) Query: 68 AAPIIVAYHFNSDLARLQKAFPQGRT-----------LDKDPCTIQEWNEGKIPLLFAHP 116 +V H + L +A + + ++ + N+ + + Sbjct: 6 EKKFLVFAHHLTMLQACTEAVIEAKVGYIRIDGSVPSSERIQLVHKFQNDPETRVAVLSI 65 Query: 117 ASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTI 176 + G GL + +VF L+W+ +Q +R + G ++ V+YLIA+ T Sbjct: 66 QAAGQGLTFT-AASHVVFAELYWNPGHIKQAEDR-----AHRIGQTSSINVHYLIAKGTF 119 Query: 177 DELVLQRLRTKSTIQDLLLNALK 199 D ++ L K T+ LN K Sbjct: 120 DTVMWSMLNRKETVTGTTLNGKK 142 >gi|156061829|ref|XP_001596837.1| hypothetical protein SS1G_03060 [Sclerotinia sclerotiorum 1980] gi|154700461|gb|EDO00200.1| hypothetical protein SS1G_03060 [Sclerotinia sclerotiorum 1980 UF-70] Length = 1081 Score = 75.7 bits (185), Expect = 4e-12, Method: Composition-based stats. Identities = 23/135 (17%), Positives = 44/135 (32%), Gaps = 17/135 (12%) Query: 74 AYHFNSDLA----RLQKAFPQGRTLDKDPCTIQEW-------NEGKIPLLFAHPASCGHG 122 F + L RL++A LD Q + + + G Sbjct: 933 FSQFTTMLQLVEWRLRRAGITTVMLDGSMTPAQRQASINHFMTDVNVECFLVSLKAGGVA 992 Query: 123 LNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQ 182 LNL N + WW+ Q +R + G R + L +++++ ++ Sbjct: 993 LNLTE-ANKVFIVDPWWNPAAEWQSADRC-----HRIGQARPCSITRLCIEDSVESRMVL 1046 Query: 183 RLRTKSTIQDLLLNA 197 K+ + +NA Sbjct: 1047 LQEKKANMIHSTINA 1061 >gi|154311656|ref|XP_001555157.1| hypothetical protein BC1G_06287 [Botryotinia fuckeliana B05.10] gi|150850798|gb|EDN25991.1| hypothetical protein BC1G_06287 [Botryotinia fuckeliana B05.10] Length = 1081 Score = 75.7 bits (185), Expect = 4e-12, Method: Composition-based stats. Identities = 23/135 (17%), Positives = 44/135 (32%), Gaps = 17/135 (12%) Query: 74 AYHFNSDLA----RLQKAFPQGRTLDKDPCTIQEW-------NEGKIPLLFAHPASCGHG 122 F + L RL++A LD Q + + + G Sbjct: 933 FSQFTTMLQLVEWRLRRAGITTVMLDGSMTPAQRQASINHFMTDVNVECFLVSLKAGGVA 992 Query: 123 LNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQ 182 LNL N + WW+ Q +R + G R + L +++++ ++ Sbjct: 993 LNLTE-ANKVFIVDPWWNPAAEWQSADRC-----HRIGQARPCSITRLCIEDSVESRMVL 1046 Query: 183 RLRTKSTIQDLLLNA 197 K+ + +NA Sbjct: 1047 LQEKKANMIHSTINA 1061 >gi|194867550|ref|XP_001972094.1| GG15331 [Drosophila erecta] gi|190653877|gb|EDV51120.1| GG15331 [Drosophila erecta] Length = 1272 Score = 75.7 bits (185), Expect = 4e-12, Method: Composition-based stats. Identities = 32/175 (18%), Positives = 67/175 (38%), Gaps = 24/175 (13%) Query: 44 EEKHWKEVHDEKIKALEVIIEKANA----APIIVAYHFNSDLARLQKAFPQGRTLDKDPC 99 K KI ++ ++ K II+ + + L + +A ++ C Sbjct: 1097 AHKSIIGDFSTKISSIVELVLKIKGDNEMEKIIIFSQWQAILIEIARALSLNGIRFRNKC 1156 Query: 100 TIQEWNEGKIPL-----LFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 T +++ + K P+ L + GLNL + + + + Q I RI Sbjct: 1157 TNKDFEDFKNPVSNVTCLLMPLSKGSKGLNLIEATH-VFLVEPILNPSDEHQAIGRI--- 1212 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKS---------TIQDLLLNALKK 200 + G K+ V+ I T++E +L + + ++++ L++LKK Sbjct: 1213 --HRFGQKKPTKVHRFIVNGTVEENILSLITSADDTTTLSTHWDLENMTLDSLKK 1265 >gi|299472392|emb|CBN77580.1| conserved unknown protein [Ectocarpus siliculosus] Length = 991 Score = 75.7 bits (185), Expect = 4e-12, Method: Composition-based stats. Identities = 27/148 (18%), Positives = 58/148 (39%), Gaps = 18/148 (12%) Query: 62 IIEKANAAPIIVAYHFNSDLA----------RLQKAFPQGRTLDKDPCTIQE--WNEGKI 109 + ++ I+V H + L R++ GRT KD + + + + Sbjct: 574 LADEMTGGKILVFAHHRNVLDALEQSVVRTGRVEYIRIDGRTKPKDRQDLVDTFQSNPSV 633 Query: 110 PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYY 169 + + G G+ L + +VF L+W + Q +R + G V V Y Sbjct: 634 RVALLGLTAAGIGITLT-AASRVVFAELYWTPAQLLQAEDRC-----HRIGQATVVKVQY 687 Query: 170 LIAQNTIDELVLQRLRTKSTIQDLLLNA 197 L+A+ ++D+ + ++ K + ++ Sbjct: 688 LVAKGSLDDALWPLIQEKIKLLGEMVEG 715 >gi|197308160|gb|ACH60431.1| Swi2/Snf2-related chromatin remodeling ATPase [Pseudotsuga macrocarpa] Length = 73 Score = 75.7 bits (185), Expect = 4e-12, Method: Composition-based stats. Identities = 14/79 (17%), Positives = 34/79 (43%), Gaps = 8/79 (10%) Query: 101 IQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQ 158 I+++N+ + + G G+NL + + + W+ + Q ++R + Sbjct: 1 IKDFNDPDSKFCIFLLSTRAGGLGINLT-AADTCIIYDSDWNPQMDMQAMDRC-----HR 54 Query: 159 AGFKRAVFVYYLIAQNTID 177 G + V V LI ++++ Sbjct: 55 IGQTKPVHVSRLITAHSVE 73 >gi|289628760|ref|ZP_06461714.1| SNF2-related:helicase, C-terminal [Pseudomonas syringae pv. aesculi str. NCPPB3681] Length = 602 Score = 75.7 bits (185), Expect = 4e-12, Method: Composition-based stats. Identities = 29/154 (18%), Positives = 58/154 (37%), Gaps = 18/154 (11%) Query: 55 KIKALEVIIEKAN-AAPIIVAYHFNSDLARLQKAFPQGRT----------LDKDPCTIQE 103 K++ L ++ + + +I+ + +A L++ + K I Sbjct: 440 KVRILADLMAELDVDDKVILFCEYQESVATLREHCLKMGVGCVTLIGSDSPKKRQKAIDA 499 Query: 104 WN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFK 162 + + + ++ G G NL N + F L W Q +R + G Sbjct: 500 FQQDPDCRVFIGTRSAAGTGYNLT-AANYVFFLGLPWTPGLQDQAEDR-----AYRNGQL 553 Query: 163 RAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 R V V +A++TID+ + Q L K + L++ Sbjct: 554 RVVVVKIPLAEDTIDQQLWQMLMDKRALASDLID 587 >gi|114596227|ref|XP_001144339.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent regulator of chromatin a5 isoform 2 [Pan troglodytes] Length = 955 Score = 75.7 bits (185), Expect = 4e-12, Method: Composition-based stats. Identities = 16/78 (20%), Positives = 38/78 (48%), Gaps = 6/78 (7%) Query: 119 CGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDE 178 G G+NL ++++ + W+ + Q ++R + G + V V+ I NT++E Sbjct: 465 GGLGINL-ATADVVILYDSDWNPQVDLQAMDR-----AHRIGQTKTVRVFRFITDNTVEE 518 Query: 179 LVLQRLRTKSTIQDLLLN 196 +++R K + +++ Sbjct: 519 RIVERAEMKLRLDSIVIQ 536 >gi|290970736|ref|XP_002668235.1| predicted protein [Naegleria gruberi] gi|284081521|gb|EFC35491.1| predicted protein [Naegleria gruberi] Length = 273 Score = 75.4 bits (184), Expect = 4e-12, Method: Composition-based stats. Identities = 24/112 (21%), Positives = 49/112 (43%), Gaps = 8/112 (7%) Query: 87 AFPQGRTLDKDPCTIQEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEH 144 F D+ I + N+ I +L + G+NL G N + + W+ Sbjct: 2 RFDGSTPFDQRQSCIDKINDNTNNITVLLISTLAGCEGINL-MGANRVALIDVNWNPSHD 60 Query: 145 QQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + + R + G + V++Y I +NT+++LVL+R K + + +++ Sbjct: 61 SEAV-----CRVFRIGQLKPVYIYRFICENTMEDLVLKRQLQKENLSNWIVD 107 >gi|68065662|ref|XP_674815.1| PfSNF2L [Plasmodium berghei strain ANKA] gi|56493633|emb|CAH95809.1| PfSNF2L, putative [Plasmodium berghei] Length = 714 Score = 75.4 bits (184), Expect = 4e-12, Method: Composition-based stats. Identities = 19/84 (22%), Positives = 41/84 (48%), Gaps = 6/84 (7%) Query: 113 FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIA 172 + G G+NL +I++ F ++ + Q ++R + G K+ V VY + Sbjct: 1 LLSTRAGGIGINLTT-ADIVILFDSDYNPQMDIQAMDR-----AHRIGQKKRVIVYRFVT 54 Query: 173 QNTIDELVLQRLRTKSTIQDLLLN 196 QN+++E +++R K + L++ Sbjct: 55 QNSVEEKIVERAAKKLKLDSLIIQ 78 >gi|115463703|ref|NP_001055451.1| Os05g0392400 [Oryza sativa Japonica Group] gi|113579002|dbj|BAF17365.1| Os05g0392400 [Oryza sativa Japonica Group] Length = 450 Score = 75.4 bits (184), Expect = 4e-12, Method: Composition-based stats. Identities = 27/152 (17%), Positives = 58/152 (38%), Gaps = 24/152 (15%) Query: 62 IIEKANAAPIIVAYHFNSDLARLQKAFPQ--------------GRTLDK-DPCTIQEWNE 106 + E +++ F L +++ + G+ L + +I+ +N Sbjct: 239 LCEALKEK-VLIFSQFIQPLELIKEHLRKIFKWREGKEILQMDGKILPRYRQNSIEVFNN 297 Query: 107 GKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA 164 +L A +C G++L G + +V + W+ + R ++R + G K+ Sbjct: 298 PDSDARVLLASTRACCEGISLT-GASRVVLLDVVWN-----PAVGRQAISRAFRIGQKKF 351 Query: 165 VFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 V+ Y LI T + R K + L+ + Sbjct: 352 VYTYNLITYGTGEGDKYDRQAEKDHLSKLVFS 383 >gi|54287520|gb|AAV31264.1| unknown protein [Oryza sativa Japonica Group] gi|260401074|gb|ACX37088.1| helicase superfamily C-terminal domain containing protein [Oryza sativa Japonica Group] Length = 446 Score = 75.4 bits (184), Expect = 4e-12, Method: Composition-based stats. Identities = 27/152 (17%), Positives = 58/152 (38%), Gaps = 24/152 (15%) Query: 62 IIEKANAAPIIVAYHFNSDLARLQKAFPQ--------------GRTLDK-DPCTIQEWNE 106 + E +++ F L +++ + G+ L + +I+ +N Sbjct: 235 LCEALKEK-VLIFSQFIQPLELIKEHLRKIFKWREGKEILQMDGKILPRYRQNSIEVFNN 293 Query: 107 GKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA 164 +L A +C G++L G + +V + W+ + R ++R + G K+ Sbjct: 294 PDSDARVLLASTRACCEGISLT-GASRVVLLDVVWN-----PAVGRQAISRAFRIGQKKF 347 Query: 165 VFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 V+ Y LI T + R K + L+ + Sbjct: 348 VYTYNLITYGTGEGDKYDRQAEKDHLSKLVFS 379 >gi|169826381|ref|YP_001696539.1| ATP-dependent helicase yqhH [Lysinibacillus sphaericus C3-41] gi|168990869|gb|ACA38409.1| Hypothetical ATP-dependent helicase yqhH [Lysinibacillus sphaericus C3-41] Length = 504 Score = 75.4 bits (184), Expect = 4e-12, Method: Composition-based stats. Identities = 35/197 (17%), Positives = 78/197 (39%), Gaps = 20/197 (10%) Query: 7 FQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKA 66 Q+E+ + + N + + ++ K + K + IIE+A Sbjct: 306 LQKEMCSSKEATALTITNMLKEHGQSQEME-----DILAKLMALEVNSKAEKTIEIIEQA 360 Query: 67 NAAPIIVAYHFNSDLARLQ-KAFPQG-------RTLDKDPCTIQEWNEGKIPLLFAHPAS 118 +I+ + + LQ +G +K + + + + Sbjct: 361 KDK-VIIFTEYRATQIYLQWYLHSKGISSVLFNGKFNKSKRDYMKHLFKERAQVLIATEA 419 Query: 119 CGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDE 178 G G+NLQ+ + ++ + L W+ + +Q I R+ + G + V +Y L ++TI+E Sbjct: 420 GGEGINLQF-CHHVINYDLPWNPMKLEQRIGRV-----HRLGQEHDVHIYNLAIEDTIEE 473 Query: 179 LVLQRLRTKSTIQDLLL 195 +L+ L TK + + ++ Sbjct: 474 KILELLHTKIDVFEKVV 490 >gi|302831510|ref|XP_002947320.1| hypothetical protein VOLCADRAFT_103414 [Volvox carteri f. nagariensis] gi|300267184|gb|EFJ51368.1| hypothetical protein VOLCADRAFT_103414 [Volvox carteri f. nagariensis] Length = 986 Score = 75.4 bits (184), Expect = 4e-12, Method: Composition-based stats. Identities = 30/160 (18%), Positives = 67/160 (41%), Gaps = 16/160 (10%) Query: 48 WKEVHDEKIKALEVIIE---KANAAPIIVAYHFNSDLARLQK------AFPQGRTLDKDP 98 W++ + K A+ +A+ A ++ H L ++ G + D Sbjct: 680 WRDTAEIKKTAVAEYCSDLLEADGAKFLLFAHHKVLLDAVKSLKARYIRIDGGTSGDDRG 739 Query: 99 CTIQEWNEG-KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 ++++ E + + + G GL + +++VF L W + QQ +R Sbjct: 740 RLVKQFQEDADVKVAILSIKAAGVGLTMT-ASSLVVFAELSWVPGDIQQAEDRC-----H 793 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + G +V +++L+ + +IDEL+ L+ K + +L+ Sbjct: 794 RIGQHTSVNIHFLLVRGSIDELMWDTLQNKLSDVGKVLDG 833 >gi|269795481|ref|YP_003314936.1| DNA/RNA helicase [Sanguibacter keddieii DSM 10542] gi|269097666|gb|ACZ22102.1| DNA/RNA helicase, superfamily II, SNF2 family [Sanguibacter keddieii DSM 10542] Length = 690 Score = 75.4 bits (184), Expect = 4e-12, Method: Composition-based stats. Identities = 27/107 (25%), Positives = 46/107 (42%), Gaps = 7/107 (6%) Query: 92 RTLDKDPCTIQEW-NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 +T I + + ++ ++ + G GLNLQ N LV L W E Q I+R Sbjct: 559 QTPKVREKNITAFVEDPEVQVVVCSLTAAGVGLNLQVASN-LVLAELSWTYAEQTQAIDR 617 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 I + G V + +IA T+D + + + +KS + L+ Sbjct: 618 I-----HRIGQAEPVTAWRIIAAQTVDSRIAELIDSKSGLAARALDG 659 >gi|298530049|ref|ZP_07017451.1| SNF2-related protein [Desulfonatronospira thiodismutans ASO3-1] gi|298509423|gb|EFI33327.1| SNF2-related protein [Desulfonatronospira thiodismutans ASO3-1] Length = 638 Score = 75.4 bits (184), Expect = 4e-12, Method: Composition-based stats. Identities = 34/183 (18%), Positives = 71/183 (38%), Gaps = 27/183 (14%) Query: 32 CLQL--ANGAVYYDEEKHWKEVHDEKIKALEVIIEK---ANAAPIIVAYHFNSDLARLQK 86 LQ+ + Y + K+K LE I+++ + +++ + + + K Sbjct: 299 LLQMRRVCDSTYLVDRNTRI---SPKLKELEGILDEIVVQSGRKMVIFSEWTTMTYLIAK 355 Query: 87 AFPQGRT----------LDKDPCTIQEW-NEGKIPLLFAHPASCGHGLNLQYGGNILVFF 135 + + K I E+ N + + S G GLNLQ + ++ F Sbjct: 356 QLSRMGINFVELSGKIPVHKRQALIDEFTNNPECKVFL-STDSGGTGLNLQ-AADCVLNF 413 Query: 136 SLWWDLEEHQQMIERIGVTRQRQAGFKRA-VFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 L W+ Q I R+ + G + V L+++N+I+E +L + K+ + + Sbjct: 414 ELPWNPARLNQRIGRVN-----RIGQTSTSINVINLVSKNSIEEKILAGIHLKTELFSGV 468 Query: 195 LNA 197 + Sbjct: 469 FDG 471 >gi|322500523|emb|CBZ35600.1| unnamed protein product [Leishmania donovani BPK282A1] Length = 1265 Score = 75.4 bits (184), Expect = 4e-12, Method: Composition-based stats. Identities = 34/164 (20%), Positives = 60/164 (36%), Gaps = 23/164 (14%) Query: 44 EEKHWKEVHDEKIKALEVIIEKA-NAAPIIVAYHFNSDLARLQKAFPQGR---------- 92 + +W K + L I ++V F + L R + + Q Sbjct: 1054 DMNNWSLQLSSKTQYLIDTIRSLPAEDKVVVFSSFLTYL-RCAQHWLQAAGVSCALYSGS 1112 Query: 93 -TLDKDPCTIQEWNEGKIP----LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQM 147 T+ + ++ +++ P +L A +SCG GLNL N W+ +Q Sbjct: 1113 MTMKQKQSLLELFHDAARPASPRVLLATISSCGVGLNLTC-ANHCFLMEPSWNPGTEEQA 1171 Query: 148 IERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQ 191 + RI + G + V LIA TI++ + Q K + Sbjct: 1172 LNRI-----YRIGQTKPVTFTKLIADGTIEQNISQLCDRKRALS 1210 >gi|146092157|ref|XP_001470221.1| DNA repair protein-like protein [Leishmania infantum] gi|134085015|emb|CAM69416.1| DNA repair protein-like protein [Leishmania infantum JPCM5] Length = 1265 Score = 75.4 bits (184), Expect = 4e-12, Method: Composition-based stats. Identities = 34/164 (20%), Positives = 60/164 (36%), Gaps = 23/164 (14%) Query: 44 EEKHWKEVHDEKIKALEVIIEKA-NAAPIIVAYHFNSDLARLQKAFPQGR---------- 92 + +W K + L I ++V F + L R + + Q Sbjct: 1054 DMNNWSLQLSSKTQYLIDTIRSLPAEDKVVVFSSFLTYL-RCAQHWLQAAGVSCALYSGS 1112 Query: 93 -TLDKDPCTIQEWNEGKIP----LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQM 147 T+ + ++ +++ P +L A +SCG GLNL N W+ +Q Sbjct: 1113 MTMKQKQSLLELFHDAARPASPRVLLATISSCGVGLNLTC-ANHCFLMEPSWNPGTEEQA 1171 Query: 148 IERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQ 191 + RI + G + V LIA TI++ + Q K + Sbjct: 1172 LNRI-----YRIGQTKPVTFTKLIADGTIEQNISQLCDRKRALS 1210 >gi|149730550|ref|XP_001489638.1| PREDICTED: zinc finger, RAN-binding domain containing 3 [Equus caballus] Length = 1072 Score = 75.4 bits (184), Expect = 5e-12, Method: Composition-based stats. Identities = 37/180 (20%), Positives = 72/180 (40%), Gaps = 20/180 (11%) Query: 36 ANGAVYYDEEKHWKEVHDEKIKALEVIIE---KANAAPIIVAYHFNSDLARLQKAFPQGR 92 A V + +K+ K A++ I+ + ++ +V H S L +A + + Sbjct: 303 ATETVMGLITRIFKQTAIAKAGAVKDYIKMMLQNDSLKFLVFAHHLSMLQACTEAVIENK 362 Query: 93 TL-----------DKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDL 141 T ++ Q + + + + G GL + +VF L+WD Sbjct: 363 TRYIRIDGSVPSSERIHLVNQFQKDPETRVAILSIQAAGQGLTFTAATH-VVFAELYWDP 421 Query: 142 EEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 +Q +R + G +V ++YLIA+ T+D L+ L K+ + LN K++ Sbjct: 422 GHIKQAEDR-----AHRIGQCSSVNIHYLIAKGTLDTLMWGMLNRKAQVTGSTLNGRKEQ 476 >gi|258565611|ref|XP_002583550.1| conserved hypothetical protein [Uncinocarpus reesii 1704] gi|237907251|gb|EEP81652.1| conserved hypothetical protein [Uncinocarpus reesii 1704] Length = 1056 Score = 75.4 bits (184), Expect = 5e-12, Method: Composition-based stats. Identities = 27/142 (19%), Positives = 53/142 (37%), Gaps = 18/142 (12%) Query: 72 IVAYHFNSDLARLQKAFPQGRT-----------LDKDPCTIQEWNEGK-IPLLFAHPASC 119 +V + S L ++ A L + + + + I +L A + Sbjct: 904 VVFSAWTSHLDLIEIALQDSGITGFTRLDGTMSLKQRNAALDAFRDDDNITVLLATLGAG 963 Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 G GLNL + V ++ Q I+R+ + G R V I + +I+E Sbjct: 964 GVGLNLTSASRVYVM-EPQYNPAAVAQAIDRV-----HRLGQTREVTTVQFIMKESIEEK 1017 Query: 180 VLQRLRTKSTIQDLLLNALKKE 201 + + + K + ++ LN K + Sbjct: 1018 IAELAKKKQQLANMSLNRGKSD 1039 >gi|68637851|emb|CAI36056.1| superfamily II DNA/RNA helicase [Pseudomonas syringae pv. phaseolicola] Length = 652 Score = 75.4 bits (184), Expect = 5e-12, Method: Composition-based stats. Identities = 29/154 (18%), Positives = 58/154 (37%), Gaps = 18/154 (11%) Query: 55 KIKALEVIIEKAN-AAPIIVAYHFNSDLARLQKAFPQGRT----------LDKDPCTIQE 103 K++ L ++ + + +I+ + +A L++ + K I Sbjct: 488 KVRILADLMAELDVDDKVILFCEYQESVATLREHCLKMGVGCVTLVGSDSPKKRQKAIDA 547 Query: 104 WN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFK 162 + + + ++ G G NL N + F L W Q +R + G Sbjct: 548 FQQDPDCRVFIGTRSAAGTGYNLT-AANYVFFLGLPWTPGLQDQAEDR-----AYRNGQL 601 Query: 163 RAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 R V V +A++TID+ + Q L K + L++ Sbjct: 602 RMVVVKIPLAEDTIDQQLWQMLMDKRALASDLID 635 >gi|157871832|ref|XP_001684465.1| DNA repair protein-like protein [Leishmania major] gi|68127534|emb|CAJ05555.1| DNA repair protein-like protein [Leishmania major strain Friedlin] Length = 922 Score = 75.4 bits (184), Expect = 5e-12, Method: Composition-based stats. Identities = 34/164 (20%), Positives = 60/164 (36%), Gaps = 23/164 (14%) Query: 44 EEKHWKEVHDEKIKALEVIIEKA-NAAPIIVAYHFNSDLARLQKAFPQGR---------- 92 + +W K + L I ++V F + L R + + Q Sbjct: 712 DMSNWSLQLSSKTQYLIDTIRSLPAEDKVVVFSSFLTYL-RCAQHWLQAAGVSCALYSGS 770 Query: 93 -TLDKDPCTIQEWNEGKIP----LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQM 147 T+ + ++ +++ P +L A +SCG GLNL N W+ +Q Sbjct: 771 MTMKQKQSLLELFHDAARPASPRVLLATISSCGVGLNLTC-ANHCFLMEPSWNPGTEEQA 829 Query: 148 IERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQ 191 + RI + G + V LIA TI++ + Q K + Sbjct: 830 LNRI-----YRIGQTKPVTFTKLIADGTIEQNISQLCDRKRALS 868 >gi|296333385|ref|ZP_06875838.1| putative RNA polymerase-associated helicase protein [Bacillus subtilis subsp. spizizenii ATCC 6633] gi|305675109|ref|YP_003866781.1| putative RNA polymerase-associated helicase protein [Bacillus subtilis subsp. spizizenii str. W23] gi|296149583|gb|EFG90479.1| putative RNA polymerase-associated helicase protein [Bacillus subtilis subsp. spizizenii ATCC 6633] gi|305413353|gb|ADM38472.1| putative RNA polymerase-associated helicase protein [Bacillus subtilis subsp. spizizenii str. W23] Length = 557 Score = 75.4 bits (184), Expect = 5e-12, Method: Composition-based stats. Identities = 33/160 (20%), Positives = 72/160 (45%), Gaps = 17/160 (10%) Query: 45 EKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQ---------GRTLD 95 ++ + + K + +I+K + +I+ + + LQ Q G Sbjct: 350 DRINQVTQNSKALQVIDLIKKIDDK-VIIFTEYRATQIYLQWFLQQNGISSVPFRGGFKR 408 Query: 96 KDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTR 155 +++ GK+ +L A + G G+NLQ+ N ++ + L W+ +Q I RI Sbjct: 409 GKKDWMKDLFRGKVQVLIA-TEAGGEGINLQF-CNHMINYDLPWNPMRLEQRIGRI---- 462 Query: 156 QRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 + G +R V +Y + ++T++E +L+ L K + + ++ Sbjct: 463 -HRLGQERDVHIYNMATKHTVEEHILKLLYEKIHLFEKVV 501 >gi|323455652|gb|EGB11520.1| hypothetical protein AURANDRAFT_17567 [Aureococcus anophagefferens] Length = 100 Score = 75.4 bits (184), Expect = 5e-12, Method: Composition-based stats. Identities = 21/93 (22%), Positives = 38/93 (40%), Gaps = 6/93 (6%) Query: 111 LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYL 170 +L G GLNL N + WW+ +Q ++R+ + G R V L Sbjct: 1 VLLVSLKCGGTGLNLTR-ANHVFLLDTWWNAAVEEQAMDRV-----HRLGQTRPVTAVRL 54 Query: 171 IAQNTIDELVLQRLRTKSTIQDLLLNALKKETI 203 +A T++ +L + K+ + L L + + Sbjct: 55 VADKTVESRILDIQQAKTLVSAGALARLSADEV 87 >gi|146229770|gb|ABQ12335.1| global transactivator-like protein [Antheraea pernyi nucleopolyhedrovirus] Length = 495 Score = 75.4 bits (184), Expect = 5e-12, Method: Composition-based stats. Identities = 34/194 (17%), Positives = 72/194 (37%), Gaps = 31/194 (15%) Query: 28 KTVKCLQLANG---AVYYDEEKHWKEVHD---------EKIKALEVIIEKANAAPIIVAY 75 + Q+ A D K + + ++ ++ +++ + ++V+ Sbjct: 293 LLCRLRQMCCHPALAKCADLFKEQAHIFEPGYKSSKCRRALELVQRVLDSPDDKVVLVSQ 352 Query: 76 H--FNSDLARLQKAFP------QGRTLDKDPCTIQ-EWNEGKIP--LLFAHPASCGHGLN 124 F +A +A GR ++ ++ +N+ P +L G GLN Sbjct: 353 WVEFLHIVAEQLRALSVPVLLYTGRLRTEERAAVENRFNDADSPYRVLLMSIKCGGVGLN 412 Query: 125 LQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIA--QNTIDELVLQ 182 L GGN LV W+ + Q RI + G ++ VY ++ +N+++ + Sbjct: 413 LT-GGNHLVLLEPHWNPQVELQAQGRI-----HRLGQRKRAHVYKMLVDEENSVERYMKT 466 Query: 183 RLRTKSTIQDLLLN 196 R K D + + Sbjct: 467 RQDKKLEFVDKVFD 480 >gi|125552219|gb|EAY97928.1| hypothetical protein OsI_19844 [Oryza sativa Indica Group] Length = 1367 Score = 75.4 bits (184), Expect = 5e-12, Method: Composition-based stats. Identities = 27/152 (17%), Positives = 58/152 (38%), Gaps = 24/152 (15%) Query: 62 IIEKANAAPIIVAYHFNSDLARLQKAFPQ--------------GRTLDK-DPCTIQEWNE 106 + E +++ F L +++ + G+ L + +I+ +N Sbjct: 1156 LCEALKEK-VLIFSQFIQPLELIKEHLRKIFKWREGKEILQMDGKILPRYRQNSIEVFNN 1214 Query: 107 GKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA 164 +L A +C G++L G + +V + W+ + R ++R + G K+ Sbjct: 1215 PDSDARVLLASTRACCEGISLT-GASRVVLLDVVWN-----PAVGRQAISRAFRIGQKKF 1268 Query: 165 VFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 V+ Y LI T + R K + L+ + Sbjct: 1269 VYTYNLITYGTGEGDKYDRQAEKDHLSKLVFS 1300 >gi|40882176|emb|CAF06002.1| related to protein RIS1 [Neurospora crassa] Length = 1226 Score = 75.4 bits (184), Expect = 5e-12, Method: Composition-based stats. Identities = 34/161 (21%), Positives = 58/161 (36%), Gaps = 23/161 (14%) Query: 43 DEEKHWKEVHDEKIKALEVII----EKANAAPIIVAYHFNSDLARLQKAFPQGRTLD--- 95 D + K L+ II + A IIV H+ L R+ Q +D Sbjct: 990 DRKHTVNMTPSAKTTRLKDIILEWQKDAPDDKIIVFTHWIL-LGRILGRVLQQEKIDFLY 1048 Query: 96 ---------KDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 ++ +I +L + G LNL N +V WW+ +Q Sbjct: 1049 LFGGMGPTVREDQIKAFQTNPRIKVLVSSLRVGGQSLNL-AAANRVVILDAWWNNGMEKQ 1107 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTK 187 R+ + G K+ + ++A+NTID+ ++ K Sbjct: 1108 AFGRVF-----RFGQKKESWFTRILAKNTIDKRIIDLQEDK 1143 >gi|16079514|ref|NP_390338.1| RNA polymerase-associated helicase protein [Bacillus subtilis subsp. subtilis str. 168] gi|221310381|ref|ZP_03592228.1| hypothetical protein Bsubs1_13471 [Bacillus subtilis subsp. subtilis str. 168] gi|221314705|ref|ZP_03596510.1| hypothetical protein BsubsN3_13392 [Bacillus subtilis subsp. subtilis str. NCIB 3610] gi|221319628|ref|ZP_03600922.1| hypothetical protein BsubsJ_13313 [Bacillus subtilis subsp. subtilis str. JH642] gi|221323904|ref|ZP_03605198.1| hypothetical protein BsubsS_13442 [Bacillus subtilis subsp. subtilis str. SMY] gi|1731040|sp|P54509|YQHH_BACSU RecName: Full=Uncharacterized ATP-dependent helicase yqhH gi|1303889|dbj|BAA12545.1| YqhH [Bacillus subtilis] gi|2634892|emb|CAB14389.1| putative RNA polymerase-associated helicase protein [Bacillus subtilis subsp. subtilis str. 168] Length = 557 Score = 75.4 bits (184), Expect = 5e-12, Method: Composition-based stats. Identities = 34/160 (21%), Positives = 72/160 (45%), Gaps = 17/160 (10%) Query: 45 EKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQ---------GRTLD 95 ++ + + K + +I+K + +I+ + + LQ Q G Sbjct: 350 DRINQVTQNSKALQVVDLIKKIDDK-VIIFTEYRATQIYLQWFLQQNGISSVPFRGGFKR 408 Query: 96 KDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTR 155 +++ GKI +L A + G G+NLQ+ N ++ + L W+ +Q I RI Sbjct: 409 GKKDWMKDLFRGKIQVLIA-TEAGGEGINLQF-CNHMINYDLPWNPMRLEQRIGRI---- 462 Query: 156 QRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 + G +R V +Y + ++T++E +L+ L K + + ++ Sbjct: 463 -HRLGQERDVHIYNMATKHTVEEHILKLLYEKIHLFEKVV 501 >gi|152976625|ref|YP_001376142.1| SNF2-related protein [Bacillus cereus subsp. cytotoxis NVH 391-98] gi|152025377|gb|ABS23147.1| SNF2-related protein [Bacillus cytotoxicus NVH 391-98] Length = 560 Score = 75.4 bits (184), Expect = 5e-12, Method: Composition-based stats. Identities = 35/167 (20%), Positives = 67/167 (40%), Gaps = 21/167 (12%) Query: 41 YYD--EEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQ-------- 90 Y D EK + K +I+K N +++ + + LQ Q Sbjct: 344 YIDVLMEKINHISFNSKANQTLELIKKINDK-VVIFTEYRASQMYLQWFLKQHGISSVPF 402 Query: 91 --GRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMI 148 G K + + + + + G G+NLQ+ N ++ + L W+ +Q I Sbjct: 403 RGGFKRGKKDWMKELFQQHAQ--VLIATEAGGEGINLQF-CNHMINYDLPWNPMRLEQRI 459 Query: 149 ERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 RI + G K V +Y L ++T++E +L+ L K + + ++ Sbjct: 460 GRI-----HRLGQKNDVHIYNLATKHTVEEHILKLLYEKINLFERVI 501 >gi|331700042|ref|YP_004336281.1| helicase domain-containing protein [Pseudonocardia dioxanivorans CB1190] gi|326954731|gb|AEA28428.1| helicase domain protein [Pseudonocardia dioxanivorans CB1190] Length = 716 Score = 75.4 bits (184), Expect = 5e-12, Method: Composition-based stats. Identities = 26/112 (23%), Positives = 42/112 (37%), Gaps = 9/112 (8%) Query: 87 AFPQGRTLDKDPCTIQEW-NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQ 145 Q RT + + + + + + G GLNLQ +I V L W E Sbjct: 581 RGEQSRT--ARQQNVDAFVEDPDVAIAVCSLTAAGVGLNLQVASDI-VLAELSWTAAEQT 637 Query: 146 QMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 Q I+R + G V + +IA TID + + + K + L+ Sbjct: 638 QAIDRC-----HRIGQTEPVTAWRIIAAQTIDARIAELIDDKGNLAAQALDG 684 >gi|9630851|ref|NP_047448.1| GTA [Bombyx mori NPV] gi|3745870|gb|AAC63717.1| GTA [Bombyx mori NPV] Length = 506 Score = 75.4 bits (184), Expect = 5e-12, Method: Composition-based stats. Identities = 34/196 (17%), Positives = 66/196 (33%), Gaps = 34/196 (17%) Query: 28 KTVKCLQLANGAVYYDEEKHWKEVHDEK------------IKALEVIIEKANAAPIIVAY 75 +K Q+ ++ E +D + ++ I+ ++ I+V Sbjct: 303 LILKLRQICCHPYLAMHGRNLLETNDCFKMDYMSSKCKRVLDLVDDILNTSDDKIILV-S 361 Query: 76 HFNSDLARLQKAFPQ-----------GRTLDKDPCTIQEWNEGKIP--LLFAHPASCGHG 122 + L + F Q + D+ N +L G G Sbjct: 362 QWVEYLKIFENFFKQKNIATLMYTGQLKVEDRILAETTFNNAADTQHRILLLSIKCGGVG 421 Query: 123 LNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYL--IAQNTIDELV 180 LNL GGN +V W+ + Q +RI + G + +VY + + N+I++ + Sbjct: 422 LNL-IGGNHIVMLEPHWNPQIELQAQDRIS-----RMGQTKNTYVYKMLNVEDNSIEKYI 475 Query: 181 LQRLRTKSTIQDLLLN 196 QR K + + Sbjct: 476 KQRQDKKIAFVNTVFE 491 >gi|291484902|dbj|BAI85977.1| hypothetical protein BSNT_03666 [Bacillus subtilis subsp. natto BEST195] Length = 557 Score = 75.4 bits (184), Expect = 5e-12, Method: Composition-based stats. Identities = 34/160 (21%), Positives = 72/160 (45%), Gaps = 17/160 (10%) Query: 45 EKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQ---------GRTLD 95 ++ + + K + +I+K + +I+ + + LQ Q G Sbjct: 350 DRINQVTQNSKALQVVDLIKKIDDK-VIIFTEYRATQIYLQWFLQQNGISSVPFRGGFKR 408 Query: 96 KDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTR 155 +++ GKI +L A + G G+NLQ+ N ++ + L W+ +Q I RI Sbjct: 409 GKKDWMKDLFRGKIQVLIA-TEAGGEGINLQF-CNHMINYDLPWNPMRLEQRIGRI---- 462 Query: 156 QRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 + G +R V +Y + ++T++E +L+ L K + + ++ Sbjct: 463 -HRLGQERDVHIYNMATKHTVEEHILKLLYEKIHLFEKVV 501 >gi|66044767|ref|YP_234608.1| SNF2-related:helicase, C-terminal [Pseudomonas syringae pv. syringae B728a] gi|63255474|gb|AAY36570.1| SNF2-related:Helicase, C-terminal [Pseudomonas syringae pv. syringae B728a] Length = 650 Score = 75.4 bits (184), Expect = 5e-12, Method: Composition-based stats. Identities = 29/154 (18%), Positives = 58/154 (37%), Gaps = 18/154 (11%) Query: 55 KIKALEVIIEKAN-AAPIIVAYHFNSDLARLQKAFPQGRT----------LDKDPCTIQE 103 K++ L ++ + + +I+ + +A L++ + K I Sbjct: 488 KVRILADLMAELDVDDKVILFCEYQESVATLREHCIKMGVGCVTLVGSDSPKKRQKAIDA 547 Query: 104 WN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFK 162 + + + ++ G G NL N + F L W Q +R + G Sbjct: 548 FQQDPDCRVFIGTRSAAGTGYNLT-AANYVFFLGLPWTPGLQDQAEDR-----AYRNGQL 601 Query: 163 RAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 R V V +A++TID+ + Q L K + L++ Sbjct: 602 RMVVVKIPLAEDTIDQQLWQMLMDKRALASDLID 635 >gi|312072535|ref|XP_003139110.1| hypothetical protein LOAG_03525 [Loa loa] gi|307765725|gb|EFO24959.1| hypothetical protein LOAG_03525 [Loa loa] Length = 770 Score = 75.0 bits (183), Expect = 5e-12, Method: Composition-based stats. Identities = 23/112 (20%), Positives = 46/112 (41%), Gaps = 6/112 (5%) Query: 90 QGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIE 149 Q + + N + L+ + G N+ N +V F W+ Q + Sbjct: 408 QTSKRHEIQTKFNDPNNLRARLMLISTRAGSLGTNM-VAANRVVIFDACWNPSHDTQSLF 466 Query: 150 RIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 R+ + G + V++Y IAQ T++E + +R TK + +++ + E Sbjct: 467 RV-----YRFGQTKPVYIYRFIAQGTMEERIYKRQVTKESTSMRVVDEAQIE 513 >gi|96979867|ref|YP_611073.1| global transactivator [Antheraea pernyi nucleopolyhedrovirus] gi|94983400|gb|ABF50340.1| global transactivator [Antheraea pernyi nucleopolyhedrovirus] Length = 495 Score = 75.0 bits (183), Expect = 5e-12, Method: Composition-based stats. Identities = 34/194 (17%), Positives = 72/194 (37%), Gaps = 31/194 (15%) Query: 28 KTVKCLQLANG---AVYYDEEKHWKEVHD---------EKIKALEVIIEKANAAPIIVAY 75 + Q+ A D K + + ++ ++ +++ + ++V+ Sbjct: 293 LLCRLRQMCCHPALAKCADLFKEQAHIFEPGYKSSKCRRALELVQRVLDSPDDKVVLVSQ 352 Query: 76 H--FNSDLARLQKAFP------QGRTLDKDPCTIQ-EWNEGKIP--LLFAHPASCGHGLN 124 F +A +A GR ++ ++ +N+ P +L G GLN Sbjct: 353 WVEFLHIVAEQLRALSVPVLLYTGRLRTEERAAVENRFNDADSPYRVLLMSIKCGGVGLN 412 Query: 125 LQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIA--QNTIDELVLQ 182 L GGN LV W+ + Q RI + G ++ VY ++ +N+++ + Sbjct: 413 LT-GGNHLVLLEPHWNPQVELQAQGRI-----HRLGQRKRAHVYKMLVDEENSVERYMKT 466 Query: 183 RLRTKSTIQDLLLN 196 R K D + + Sbjct: 467 RQDKKLEFVDKVFD 480 >gi|321311942|ref|YP_004204229.1| putative RNA polymerase-associated helicase protein [Bacillus subtilis BSn5] gi|320018216|gb|ADV93202.1| putative RNA polymerase-associated helicase protein [Bacillus subtilis BSn5] Length = 557 Score = 75.0 bits (183), Expect = 5e-12, Method: Composition-based stats. Identities = 34/160 (21%), Positives = 72/160 (45%), Gaps = 17/160 (10%) Query: 45 EKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQ---------GRTLD 95 ++ + + K + +I+K + +I+ + + LQ Q G Sbjct: 350 DRINQVTQNSKALQVVDLIKKIDDK-VIIFTEYRATQIYLQWFLQQNGISSVPFRGGFKR 408 Query: 96 KDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTR 155 +++ GKI +L A + G G+NLQ+ N ++ + L W+ +Q I RI Sbjct: 409 GKKDWMKDLFRGKIQVLIA-TEAGGEGINLQF-CNHMINYDLPWNPMRLEQRIGRI---- 462 Query: 156 QRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 + G +R V +Y + ++T++E +L+ L K + + ++ Sbjct: 463 -HRLGQERDVHIYNMATKHTVEEHILKLLYEKIHLFEKVV 501 >gi|222631484|gb|EEE63616.1| hypothetical protein OsJ_18433 [Oryza sativa Japonica Group] Length = 1364 Score = 75.0 bits (183), Expect = 5e-12, Method: Composition-based stats. Identities = 27/152 (17%), Positives = 58/152 (38%), Gaps = 24/152 (15%) Query: 62 IIEKANAAPIIVAYHFNSDLARLQKAFPQ--------------GRTLDK-DPCTIQEWNE 106 + E +++ F L +++ + G+ L + +I+ +N Sbjct: 1153 LCEALKEK-VLIFSQFIQPLELIKEHLRKIFKWREGKEILQMDGKILPRYRQNSIEVFNN 1211 Query: 107 GKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA 164 +L A +C G++L G + +V + W+ + R ++R + G K+ Sbjct: 1212 PDSDARVLLASTRACCEGISLT-GASRVVLLDVVWN-----PAVGRQAISRAFRIGQKKF 1265 Query: 165 VFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 V+ Y LI T + R K + L+ + Sbjct: 1266 VYTYNLITYGTGEGDKYDRQAEKDHLSKLVFS 1297 >gi|237801981|ref|ZP_04590442.1| SNF2-related:helicase [Pseudomonas syringae pv. oryzae str. 1_6] gi|331024839|gb|EGI04895.1| SNF2-related:helicase [Pseudomonas syringae pv. oryzae str. 1_6] Length = 651 Score = 75.0 bits (183), Expect = 5e-12, Method: Composition-based stats. Identities = 29/154 (18%), Positives = 58/154 (37%), Gaps = 18/154 (11%) Query: 55 KIKALEVIIEKAN-AAPIIVAYHFNSDLARLQKAFPQGRT----------LDKDPCTIQE 103 K++ L ++ + + +I+ + +A L++ + K I Sbjct: 488 KVRILADLMAELDVDDKVILFCEYQESVATLREHCIKMGVGCVTLVGSDSPKKRQKAIDA 547 Query: 104 WN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFK 162 + + + ++ G G NL N + F L W Q +R + G Sbjct: 548 FQQDPDCRVFIGTRSAAGTGYNLT-AANYVFFLGLPWTPGLQDQAEDR-----AYRNGQL 601 Query: 163 RAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 R V V +A++TID+ + Q L K + L++ Sbjct: 602 RMVVVKIPLAEDTIDQQLWQMLMDKRALASDLID 635 >gi|289615990|emb|CBI57341.1| unnamed protein product [Sordaria macrospora] Length = 1811 Score = 75.0 bits (183), Expect = 5e-12, Method: Composition-based stats. Identities = 25/98 (25%), Positives = 42/98 (42%), Gaps = 7/98 (7%) Query: 84 LQKAFPQGRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLE 142 L K + K I+++N + + + + G GLN+ G N +V F + Sbjct: 1373 LHKRLDGSTPVGKRQAAIKDFNTDNSLDVYLISTKAGGVGLNI-PGANRVVLFDFGFTPA 1431 Query: 143 EHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELV 180 E QQ + R + G K+ VFVY+L T + + Sbjct: 1432 EEQQAVGR-----AYRIGQKKDVFVYHLKVGGTYETAI 1464 >gi|159164911|gb|ABV80240.2| mutant required to maintain repression 1 [Zea mays] Length = 1435 Score = 75.0 bits (183), Expect = 5e-12, Method: Composition-based stats. Identities = 27/151 (17%), Positives = 59/151 (39%), Gaps = 23/151 (15%) Query: 63 IEKANAAPIIVAYHFNSDLARLQKAFPQ--------------GRTLDK-DPCTIQEWNEG 107 + +A +++ F L +++ + G+ L + +I+ +N Sbjct: 1226 LSEALREKVLIFSQFIQPLELIKEHLRKFFKWREGKEILQMDGKILPRYRQASIEAFNNP 1285 Query: 108 KIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 +L A +C G++L G + +V + W+ + R ++R + G K+ V Sbjct: 1286 NNDSRVLLASTRACCEGISLT-GASRIVLLDVVWNPV-----VGRQAISRAFRIGQKKFV 1339 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + Y LI T + R K + L+ + Sbjct: 1340 YTYNLITYGTGEGDKYDRQAEKDHLSKLVFS 1370 >gi|224541746|ref|ZP_03682285.1| hypothetical protein CATMIT_00918 [Catenibacterium mitsuokai DSM 15897] gi|224525350|gb|EEF94455.1| hypothetical protein CATMIT_00918 [Catenibacterium mitsuokai DSM 15897] Length = 716 Score = 75.0 bits (183), Expect = 6e-12, Method: Composition-based stats. Identities = 30/157 (19%), Positives = 56/157 (35%), Gaps = 16/157 (10%) Query: 50 EVHDEKIKALEVIIEK-ANAAPIIVAYHFNSDLARLQKAF--------PQGRTLDKDPCT 100 + + LE+I E +IV + + ++ K + Sbjct: 536 HDSSKACRMLEIIQEAKEEGRKVIVFSFYLDTIRKISKLLGNQCTEIINGSVSPKHRQEI 595 Query: 101 IQEWNEGKI-PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQA 159 I E+ +L + + G GLN+Q ++++ Q I R + Sbjct: 596 IDEFESAPAGSVLLSQIMAGGTGLNIQ-SASVVIICEPQIKPSIESQAISR-----AYRM 649 Query: 160 GFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 G R V VY L+ +TIDE + L K+ + + + Sbjct: 650 GQSRNVLVYRLLCNDTIDERITDILTRKTNVFNAFAD 686 >gi|109522620|ref|YP_655432.1| gp53 [Mycobacterium phage PLot] gi|88910727|gb|ABD58652.1| gp53 [Mycobacterium phage PLot] Length = 647 Score = 75.0 bits (183), Expect = 6e-12, Method: Composition-based stats. Identities = 30/230 (13%), Positives = 73/230 (31%), Gaps = 39/230 (16%) Query: 1 MKQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYD-------EEKHWKEVHD 53 +K Y ++ L+ + A ++ + Q+A Y D E+ + Sbjct: 412 LKAYQAMVKDAAVKLESGVLSANGVLAEMTRLKQMACS--YGDLAIAPTGEQTFRPSLPS 469 Query: 54 EKIKALEVIIEKAN--------AAPIIVAYHFNSDLAR---------LQKAFPQGRTLDK 96 K L ++ +IVA F L ++ G +K Sbjct: 470 NKFDYLVDLLSDRGIGSGEFDPTGKVIVASQFTKLLNLFYAELNKLGIKCHLLTGAISEK 529 Query: 97 DP-CTIQEWNEGKIP-----LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 + + KI + + + G + L + +V W+ ++ +Q+ +R Sbjct: 530 ERVRMADAFQNTKIGDDTPHVFLLNTIAGGASITL-DAADDVVTLDETWNKDDQEQVEDR 588 Query: 151 IGVTRQRQAGF-KRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 + V ++ L + +I+E + + +++ + Sbjct: 589 -----AHRISRTDHTVTIHNLRSLGSIEERIATSAFAQERNIKSIIDGAR 633 >gi|190352247|gb|ACE76519.1| Smarca4-like protein [Sus scrofa] Length = 244 Score = 75.0 bits (183), Expect = 6e-12, Method: Composition-based stats. Identities = 21/105 (20%), Positives = 42/105 (40%), Gaps = 8/105 (7%) Query: 95 DKDPCTIQEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIG 152 + ++ +NE + + + G GLNLQ + ++ F W+ + Q Sbjct: 5 EDRGMLLKTFNEPGSEYFIFLLSTRAGGLGLNLQ-SADTVIIFDSDWNPHQDLQA----- 58 Query: 153 VTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 R + G + V V L N+++E L + K + ++ A Sbjct: 59 QDRAHRIGQQNEVRVLRLCTVNSVEEKFLAAAKYKLNVDQKVIQA 103 >gi|71653576|ref|XP_815423.1| DNA excision/repair protein SNF2 [Trypanosoma cruzi strain CL Brener] gi|70880477|gb|EAN93572.1| DNA excision/repair protein SNF2, putative [Trypanosoma cruzi] Length = 773 Score = 75.0 bits (183), Expect = 6e-12, Method: Composition-based stats. Identities = 27/115 (23%), Positives = 45/115 (39%), Gaps = 11/115 (9%) Query: 80 DLARLQKAFPQGRTLDKDPCTIQEWNEGK-IPLLFAHPASCGHGLNLQYGGNILVFFSLW 138 D ARL P L T+Q +N+ + + + G GL ++ +++ Sbjct: 503 DFARLDGDVPAEERL----KTVQGFNQSERLLVCLLTTQVGGVGLTVEAASAVIIM-DPS 557 Query: 139 WDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDL 193 W+ Q I+R+ + G R V VY LI T++E V + K Sbjct: 558 WNPSSDAQAIDRV-----HRIGQTRDVVVYRLITCGTVEEKVYRNQVFKVMAAKQ 607 >gi|330841728|ref|XP_003292844.1| hypothetical protein DICPUDRAFT_58185 [Dictyostelium purpureum] gi|325076886|gb|EGC30638.1| hypothetical protein DICPUDRAFT_58185 [Dictyostelium purpureum] Length = 931 Score = 75.0 bits (183), Expect = 6e-12, Method: Composition-based stats. Identities = 36/180 (20%), Positives = 71/180 (39%), Gaps = 26/180 (14%) Query: 36 ANGAVYYDEEKHWKEVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQKAFPQG-- 91 +NG V + ++E K+K+ I K ++ H + + L+ A + Sbjct: 75 SNGLVKGQIMELYRETGKAKLKSSCEYISKLIKEKEKFLIFAHHSDIMDGLESAIQKSKA 134 Query: 92 ---RTLDKDPCTIQE------WNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLE 142 R P +++ + + G GL L N++VF L+W Sbjct: 135 GYIRIDGSTPAVLRQTYVNKFQTNSSCQVALLSITAAGTGLTLT-ASNLVVFVELYWTPG 193 Query: 143 EHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELV-------LQRLRTKSTIQDLLL 195 +Q +R+ + G + V+++YLI +NT+D+ + L+ L Q+ +L Sbjct: 194 VLRQAEDRV-----HRIGQTKDVYIHYLIGKNTLDDRIWPIICNKLEVLGETLDGQEEIL 248 >gi|284991028|ref|YP_003409582.1| helicase domain-containing protein [Geodermatophilus obscurus DSM 43160] gi|284064273|gb|ADB75211.1| helicase domain protein [Geodermatophilus obscurus DSM 43160] Length = 714 Score = 75.0 bits (183), Expect = 6e-12, Method: Composition-based stats. Identities = 26/103 (25%), Positives = 42/103 (40%), Gaps = 7/103 (6%) Query: 96 KDPCTIQEW-NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 I + N+ + + + G GLNLQ NI V L W E Q I+R Sbjct: 585 SRQRNIDAFVNDPDVAVAVCSLTAAGVGLNLQVASNI-VLAELSWTDAEQTQAIDR---- 639 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + G V + +IA TID + + + +K+ + L+ Sbjct: 640 -SHRIGQTEPVTAWRIIAAQTIDARIAELIDSKAGLAARALDG 681 >gi|163941989|ref|YP_001646873.1| non-specific serine/threonine protein kinase [Bacillus weihenstephanensis KBAB4] gi|163864186|gb|ABY45245.1| Non-specific serine/threonine protein kinase [Bacillus weihenstephanensis KBAB4] Length = 560 Score = 75.0 bits (183), Expect = 6e-12, Method: Composition-based stats. Identities = 31/163 (19%), Positives = 65/163 (39%), Gaps = 21/163 (12%) Query: 44 EEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQ-----GRTLDKDP 98 +K + K +IE+ + +I+ + + LQ Q Sbjct: 349 MDKINHIPFNSKANKALELIEEVDDK-VIIFTEYRASQMYLQWFLQQHGISSVPFRGGFK 407 Query: 99 CTIQEW------NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIG 152 ++W N ++ + G G+NLQ+ + ++ + L W+ +Q I RI Sbjct: 408 RGKKDWMKELFQNHAQV---LIATEAGGEGINLQF-CSHMINYDLPWNPMRLEQRIGRI- 462 Query: 153 VTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 + G K V +Y L ++T++E +L+ L K + + ++ Sbjct: 463 ----HRLGQKNDVHIYNLATKHTVEEHILKLLYEKINLFERVI 501 >gi|327260656|ref|XP_003215150.1| PREDICTED: zinc finger Ran-binding domain-containing protein 3-like [Anolis carolinensis] Length = 1095 Score = 75.0 bits (183), Expect = 6e-12, Method: Composition-based stats. Identities = 37/170 (21%), Positives = 66/170 (38%), Gaps = 21/170 (12%) Query: 49 KEVHDEKIKALEVIIE---KANAAPIIVAYHFNSDLARLQKAFPQGRTL----------- 94 K+ K A++ I+ + + +V H S L +A + +T Sbjct: 314 KQTAIAKAGAVKDYIKMLLENDNLKFLVFAHHLSMLQACTEAVIENKTRYIRIDGSVASS 373 Query: 95 DKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 ++ Q + + + G GL + +VF L+WD +Q +R Sbjct: 374 ERINLVNQFQKDPDTRVAILSIQAAGQGLTFTAATH-VVFAELYWDPGHIKQAEDR---- 428 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIH 204 + G +V ++YLIA T+D L+ L K+ + LN KKE + Sbjct: 429 -AHRIGQCSSVNIHYLIANGTMDPLMWAMLNRKARVTGTTLNG-KKEKLQ 476 >gi|66812928|ref|XP_640643.1| SNF2-related domain-containing protein [Dictyostelium discoideum AX4] gi|60468538|gb|EAL66541.1| SNF2-related domain-containing protein [Dictyostelium discoideum AX4] Length = 1021 Score = 75.0 bits (183), Expect = 6e-12, Method: Composition-based stats. Identities = 26/153 (16%), Positives = 55/153 (35%), Gaps = 22/153 (14%) Query: 60 EVIIEKANAAPIIVAYHFN-------SDLARLQKAFPQGRTL---------DKDPCTIQE 103 E +++ ++ H L +++ + + +++ Sbjct: 638 EKLVDAPIDQKFLIFAHHKEVINGIVHMLGKIKVDKKKLEFIKIDGSTPAQNRNDYVNDF 697 Query: 104 WNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKR 163 N+ + + G GL L ++F L W Q +R + G Sbjct: 698 QNDPNCRVAVLSITAAGTGLTLT-AATCVIFAELSWTPGVLFQAEDR-----AHRYGQTS 751 Query: 164 AVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 +V V YLIA T+DE++ + +K T+ +L+ Sbjct: 752 SVLVQYLIALGTVDEMIWSLVESKKTLLGRVLD 784 >gi|326478247|gb|EGE02257.1| SNF2 family helicase [Trichophyton equinum CBS 127.97] Length = 979 Score = 75.0 bits (183), Expect = 6e-12, Method: Composition-based stats. Identities = 27/151 (17%), Positives = 59/151 (39%), Gaps = 20/151 (13%) Query: 53 DEKIKALEVII----EKANAAPIIVAYHFNSDLARL---------QKAFPQGRTLDKDPC 99 K++A+++ + +++ I + F + + + G+ + Sbjct: 748 SAKLRAVKLFVSKWLKESPNIKITIFTQFLGMIGAISSICEAEGWRYITLCGKLHHRTRH 807 Query: 100 T-IQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQ 158 I+ + E + +L + + G GLNL + + LWW+ QQ R+ + Sbjct: 808 ANIKRFREENVSILISSLKAGGVGLNLTM-ASKCILVDLWWNEAIEQQAFCRLF-----R 861 Query: 159 AGFKRAVFVYYLIAQNTIDELVLQRLRTKST 189 G K V + + +NT+D+ + KS Sbjct: 862 IGQKNDVEIVRICVENTVDDRLQLIQSRKSE 892 >gi|85085493|ref|XP_957522.1| hypothetical protein NCU04445 [Neurospora crassa OR74A] gi|28918614|gb|EAA28286.1| predicted protein [Neurospora crassa OR74A] Length = 1139 Score = 75.0 bits (183), Expect = 6e-12, Method: Composition-based stats. Identities = 34/161 (21%), Positives = 58/161 (36%), Gaps = 23/161 (14%) Query: 43 DEEKHWKEVHDEKIKALEVII----EKANAAPIIVAYHFNSDLARLQKAFPQGRTLD--- 95 D + K L+ II + A IIV H+ L R+ Q +D Sbjct: 903 DRKHTVNMTPSAKTTRLKDIILEWQKDAPDDKIIVFTHWIL-LGRILGRVLQQEKIDFLY 961 Query: 96 ---------KDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 ++ +I +L + G LNL N +V WW+ +Q Sbjct: 962 LFGGMGPTVREDQIKAFQTNPRIKVLVSSLRVGGQSLNL-AAANRVVILDAWWNNGMEKQ 1020 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTK 187 R+ + G K+ + ++A+NTID+ ++ K Sbjct: 1021 AFGRVF-----RFGQKKESWFTRILAKNTIDKRIIDLQEDK 1056 >gi|134081676|emb|CAK46610.1| unnamed protein product [Aspergillus niger] Length = 1189 Score = 75.0 bits (183), Expect = 6e-12, Method: Composition-based stats. Identities = 35/171 (20%), Positives = 66/171 (38%), Gaps = 24/171 (14%) Query: 43 DEEKHWK-----EVHDEKIKALEVIIEK--ANAAP--IIVAYHFNSDLARLQ-----KAF 88 DE+ W + K+ + I+ + A +P I++ F + L + + Sbjct: 962 DEDTDWIKACARHMPSAKLTKIREILTEWLAQDSPGKIVIFTQFLDFVQILATMCQAENW 1021 Query: 89 PQGRTLDKDPCTIQEWN-------EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDL 141 P K ++E N + + ++ A + G GL+L N + LWW+ Sbjct: 1022 PYVLLTGKLSLAVRENNMTLFSDKDSEKRIMIASLKAGGTGLDL-SAANKCILVDLWWNE 1080 Query: 142 EEHQQ--MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 +Q + R + G + V LI +N+ID+ +L K+ I Sbjct: 1081 AIQEQLLTLPFQAFCRLFRIGQESEVEFVKLIIENSIDDYLLNLQTHKTAI 1131 >gi|308498547|ref|XP_003111460.1| CRE-XNP-1 protein [Caenorhabditis remanei] gi|308241008|gb|EFO84960.1| CRE-XNP-1 protein [Caenorhabditis remanei] Length = 1391 Score = 75.0 bits (183), Expect = 6e-12, Method: Composition-based stats. Identities = 21/105 (20%), Positives = 43/105 (40%), Gaps = 9/105 (8%) Query: 95 DKDPCTIQEWNEGKI---PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERI 151 K +N + L+ + G N+ N ++ F W+ Q + R+ Sbjct: 1052 GKRDSVQTHFNSPENLRARLMLISTRAGSLGTNM-VAANRVIIFDACWNPSHDTQSLFRV 1110 Query: 152 GVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + G + V++Y IAQ T++E + +R TK + +++ Sbjct: 1111 -----YRFGQTKPVYIYRFIAQGTMEERIYKRQVTKESTSMRVVD 1150 >gi|326923079|ref|XP_003207769.1| PREDICTED: LOW QUALITY PROTEIN: zinc finger Ran-binding domain-containing protein 3-like [Meleagris gallopavo] Length = 1262 Score = 75.0 bits (183), Expect = 6e-12, Method: Composition-based stats. Identities = 34/171 (19%), Positives = 65/171 (38%), Gaps = 20/171 (11%) Query: 46 KHWKEVHDEKIKALEVIIE---KANAAPIIVAYHFNSDLARLQKAFPQGRTL-------- 94 + +KE K A++ I + + +V H S L +A + + Sbjct: 480 RMYKETAIAKAGAVKDYIRMMLENDKLKFLVFAHHLSMLQACAEAVIENKVRYIRIDGSV 539 Query: 95 ---DKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERI 151 ++ Q + + + G GL + +VF L+WD +Q +R Sbjct: 540 PSAERIHLVNQFQKDPDTRVAILSIQAAGQGLTFTAATH-VVFAELYWDPGHIKQAEDR- 597 Query: 152 GVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKET 202 + G +V +++LIA+ T+D L+ L K+ + LN K+ Sbjct: 598 ----AHRIGQCSSVNIHFLIAKGTLDPLMWAMLNRKAKVTGSTLNGKKERM 644 >gi|226290585|gb|EEH46069.1| conserved hypothetical protein [Paracoccidioides brasiliensis Pb18] Length = 1761 Score = 75.0 bits (183), Expect = 6e-12, Method: Composition-based stats. Identities = 26/142 (18%), Positives = 58/142 (40%), Gaps = 17/142 (11%) Query: 68 AAPIIVAYHFNSDLARLQKAFPQ-GRTLDK---------DPCTIQEWNEGK-IPLLFAHP 116 +++ H L L+ Q GRT + + + +N G + Sbjct: 1356 GDKVLLFSHSIPTLNYLEHVLRQAGRTYSRLDGKTPIATRQISTKNFNSGSYTQVYLIST 1415 Query: 117 ASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTI 176 + G GLN+ G N ++ F ++ +Q + R + G ++ VFVY +A T Sbjct: 1416 RAGGLGLNI-PGANRVIIFDFQFNPTWEEQAVGR-----AYRLGQRKPVFVYRFLAGGTF 1469 Query: 177 DELVLQRLRTKSTIQDLLLNAL 198 ++++ + K+ + +++ + Sbjct: 1470 EDIMHNKAVFKTQLSYRVVDKM 1491 >gi|296809167|ref|XP_002844922.1| chromatin-remodeling complex ATPase chain isw-1 [Arthroderma otae CBS 113480] gi|238844405|gb|EEQ34067.1| chromatin-remodeling complex ATPase chain isw-1 [Arthroderma otae CBS 113480] Length = 1771 Score = 75.0 bits (183), Expect = 6e-12, Method: Composition-based stats. Identities = 24/152 (15%), Positives = 58/152 (38%), Gaps = 18/152 (11%) Query: 52 HDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARL---------QKAFPQGRT-LDKDPC 99 H +I+ + I++++ +++ + L + + G+T + Sbjct: 1308 HSRRIQMVGQIVDESIKAGDKVLIFSGYLYTLTYIGTMLAAKGQKFCRLDGKTPIATRQA 1367 Query: 100 TIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQA 159 + ++ + + GLN+ G N ++ F ++ +Q I R + Sbjct: 1368 ATKSFSNSDSQVYLISTKAGALGLNI-IGANRVIIFESEYNPTWEEQAIGR-----AYRL 1421 Query: 160 GFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQ 191 G + VFVY + T +EL+ ++ K + Sbjct: 1422 GQTKDVFVYRFVMGGTFEELIHEKGVFKKNMA 1453 >gi|225678359|gb|EEH16643.1| XNP-1 [Paracoccidioides brasiliensis Pb03] Length = 1657 Score = 75.0 bits (183), Expect = 6e-12, Method: Composition-based stats. Identities = 26/142 (18%), Positives = 58/142 (40%), Gaps = 17/142 (11%) Query: 68 AAPIIVAYHFNSDLARLQKAFPQ-GRTLDK---------DPCTIQEWNEGK-IPLLFAHP 116 +++ H L L+ Q GRT + + + +N G + Sbjct: 1256 GDKVLLFSHSIPTLNYLEHVLRQAGRTYSRLDGKTPIATRQISTKNFNSGSYTQVYLIST 1315 Query: 117 ASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTI 176 + G GLN+ G N ++ F ++ +Q + R + G ++ VFVY +A T Sbjct: 1316 RAGGLGLNI-PGANRVIIFDFQFNPTWEEQAVGR-----AYRLGQRKPVFVYRFLAGGTF 1369 Query: 177 DELVLQRLRTKSTIQDLLLNAL 198 ++++ + K+ + +++ + Sbjct: 1370 EDIMHNKAVFKTQLSYRVVDKM 1391 >gi|195152255|ref|XP_002017052.1| GL22086 [Drosophila persimilis] gi|194112109|gb|EDW34152.1| GL22086 [Drosophila persimilis] Length = 1712 Score = 75.0 bits (183), Expect = 6e-12, Method: Composition-based stats. Identities = 26/148 (17%), Positives = 57/148 (38%), Gaps = 20/148 (13%) Query: 64 EKANAAPIIVAYHFNSDLARLQK-------------AFPQGRTLDKDPCTIQEWN-EGKI 109 E + ++ + L ++ + + +N + I Sbjct: 1498 ESVSQHRALIFCQLKAMLDIVEHDLLRRHLPSVTYLRLDGSVPASQRQDIVNNFNSDPSI 1557 Query: 110 PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYY 169 +L G GLNL G + ++F W+ + Q ++R + G K+ V VY Sbjct: 1558 DVLLLTTLVGGLGLNLT-GADTVIFVEHDWNPMKDLQAMDR-----AHRIGQKKVVNVYR 1611 Query: 170 LIAQNTIDELVLQRLRTKSTIQDLLLNA 197 LI +N+++E ++ + K + +++A Sbjct: 1612 LITRNSLEEKIMGLQKFKILTANTVVSA 1639 >gi|330894793|gb|EGH27454.1| SNF2-related:helicase [Pseudomonas syringae pv. mori str. 301020] Length = 650 Score = 75.0 bits (183), Expect = 6e-12, Method: Composition-based stats. Identities = 29/154 (18%), Positives = 58/154 (37%), Gaps = 18/154 (11%) Query: 55 KIKALEVIIEKAN-AAPIIVAYHFNSDLARLQKAFPQGRT----------LDKDPCTIQE 103 K++ L ++ + + +I+ + +A L++ + K I Sbjct: 488 KVRILADLMAELDVDDKVILFCEYQESVATLREHCLKMDVGCVTLVGSDSPKKRQKAIDA 547 Query: 104 WN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFK 162 + + + ++ G G NL N + F L W Q +R + G Sbjct: 548 FQQDPDCRVFIGTRSAAGTGYNLT-AANYVFFLGLPWTPGLQDQAEDR-----AYRNGQL 601 Query: 163 RAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 R V V +A++TID+ + Q L K + L++ Sbjct: 602 RMVVVKIPLAEDTIDQQLWQMLMDKRALASDLID 635 >gi|168000545|ref|XP_001752976.1| SNF2 family DNA-dependent ATPase [Physcomitrella patens subsp. patens] gi|162695675|gb|EDQ82017.1| SNF2 family DNA-dependent ATPase [Physcomitrella patens subsp. patens] Length = 653 Score = 75.0 bits (183), Expect = 6e-12, Method: Composition-based stats. Identities = 31/170 (18%), Positives = 69/170 (40%), Gaps = 25/170 (14%) Query: 46 KHWKEVHDEKIKALEVIIEKANAAP--IIVAYHFNSDLARLQKA------FPQGRTLDK- 96 K++ + ++++ N A +++ + LA ++ + +G + + Sbjct: 447 GDVDVKAGAKLRWVLDMVQQCNDAKEKLLIFSEYLYSLALIENMAVQRMKWSKGLQILRL 506 Query: 97 --------DPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQM 147 ++N + ++ +L A +CG G++L G + ++ + W+ +Q Sbjct: 507 DGSLPPQERERVQHKFNTDPEVRVLCASIKACGEGISL-VGASRVILLEVLWNPSVPRQA 565 Query: 148 IERIGVTRQRQAGFKRAVFVYYLIAQNTIDE-LVLQRLRTKSTIQDLLLN 196 I R + G +R V VY LIA T +E + K + LL + Sbjct: 566 ISR-----AFRIGQQRKVVVYRLIAAGTYEEMNMHAAATRKEWLSRLLFD 610 >gi|242060152|ref|XP_002451365.1| hypothetical protein SORBIDRAFT_04g000808 [Sorghum bicolor] gi|241931196|gb|EES04341.1| hypothetical protein SORBIDRAFT_04g000808 [Sorghum bicolor] Length = 160 Score = 75.0 bits (183), Expect = 7e-12, Method: Composition-based stats. Identities = 19/88 (21%), Positives = 34/88 (38%), Gaps = 6/88 (6%) Query: 110 PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYY 169 PL G G+NL + ++ + + Q ++R + G R V VY Sbjct: 39 PLFLLTTKVGGVGINLT-AASRVIIIDPSDNPCDDNQAVDR-----TYRIGQVRDVIVYR 92 Query: 170 LIAQNTIDELVLQRLRTKSTIQDLLLNA 197 L+ TI+E ++ K + +L Sbjct: 93 LVTCGTIEEHTYRQQTLKVETSNDVLEG 120 >gi|170781504|ref|YP_001709836.1| putative helicase [Clavibacter michiganensis subsp. sepedonicus] gi|169156072|emb|CAQ01209.1| putative helicase [Clavibacter michiganensis subsp. sepedonicus] Length = 688 Score = 75.0 bits (183), Expect = 7e-12, Method: Composition-based stats. Identities = 24/102 (23%), Positives = 44/102 (43%), Gaps = 6/102 (5%) Query: 96 KDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTR 155 + N+ ++ ++ + G GLNLQ N +V L W E Q I+R+ Sbjct: 566 RQNAIDSFQNDPEVKVVVCSLTAAGVGLNLQAASN-VVLAELSWTSAEETQAIDRV---- 620 Query: 156 QRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + G + V + +IA TID + + + K+ + L+ Sbjct: 621 -HRIGQEEPVTAWRIIAAQTIDAKLAELIDGKAGLAARALDG 661 >gi|309355669|emb|CAP38453.2| CBR-RAD-26 protein [Caenorhabditis briggsae AF16] Length = 1340 Score = 75.0 bits (183), Expect = 7e-12, Method: Composition-based stats. Identities = 29/173 (16%), Positives = 61/173 (35%), Gaps = 34/173 (19%) Query: 58 ALEVIIEKAN-AAPIIVAYHFNSDLARLQKAFPQGRTLDKD------------------- 97 ALE++ E I++ + L L++ + + + K+ Sbjct: 849 ALEILDESTKIGEKILIFSQNLTALDMLEEILRKRQVVKKEKSEHQERWEKNRNYLRLDG 908 Query: 98 -------PCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIE 149 I +N E + L + G+NL N + W+ Q + Sbjct: 909 TTSGADREKLINRFNSEPGLHLFLISTRAGSLGINL-VSANRCIIIDACWNPCHDAQAV- 966 Query: 150 RIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKET 202 R + G ++ FVY LI N+++ + R +K +Q +++ + + Sbjct: 967 ----CRVYRYGQQKKTFVYRLIMDNSMERSIFNRQISKHGLQQRVVDDAQVDA 1015 >gi|302851167|ref|XP_002957108.1| hypothetical protein VOLCADRAFT_107529 [Volvox carteri f. nagariensis] gi|300257515|gb|EFJ41762.1| hypothetical protein VOLCADRAFT_107529 [Volvox carteri f. nagariensis] Length = 1252 Score = 74.6 bits (182), Expect = 7e-12, Method: Composition-based stats. Identities = 20/89 (22%), Positives = 39/89 (43%), Gaps = 6/89 (6%) Query: 117 ASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTI 176 A+CGHG + ++ WW+ QQ +RI + G + + V + TI Sbjct: 951 AACGHGFCRTCVIDHVMLMDPWWNPAVEQQAQDRI-----HRLGQYKPITVVRFVIAGTI 1005 Query: 177 DELVLQRLRTKSTIQDLLLNALKKETIHV 205 +E +L+ K + + + ++ T+ V Sbjct: 1006 EERILKLQEKKQLVFEG-CSGVQGRTMAV 1033 >gi|315048351|ref|XP_003173550.1| ISWI chromatin-remodeling complex ATPase ISW2 [Arthroderma gypseum CBS 118893] gi|311341517|gb|EFR00720.1| ISWI chromatin-remodeling complex ATPase ISW2 [Arthroderma gypseum CBS 118893] Length = 1808 Score = 74.6 bits (182), Expect = 7e-12, Method: Composition-based stats. Identities = 23/152 (15%), Positives = 58/152 (38%), Gaps = 18/152 (11%) Query: 52 HDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARL---------QKAFPQGRT-LDKDPC 99 + + + + I++++ +++ + L L + G+T + Sbjct: 1314 NSHRTQMVGRIVDESIKTGDKVLIFSGYLHTLTYLGSMLEARGQKFCRLDGKTPIATRQT 1373 Query: 100 TIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQA 159 + +++ + + GLN+ G N ++ F ++ +Q I R + Sbjct: 1374 ATKNFSDSDAHVYLISTKAGALGLNI-IGANRVIIFESEYNPTWEEQAIGR-----AYRL 1427 Query: 160 GFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQ 191 G + VFVY + T +EL+ ++ K + Sbjct: 1428 GQAKDVFVYRFVMGGTFEELIHEKGVFKKNMA 1459 >gi|145546039|ref|XP_001458703.1| hypothetical protein [Paramecium tetraurelia strain d4-2] gi|124426524|emb|CAK91306.1| unnamed protein product [Paramecium tetraurelia] Length = 1228 Score = 74.6 bits (182), Expect = 7e-12, Method: Composition-based stats. Identities = 29/148 (19%), Positives = 53/148 (35%), Gaps = 18/148 (12%) Query: 65 KANAAPIIVAYHFNSDLARLQKAFPQGRT----------LDKDPCTIQEW-NEGKIPLLF 113 + ++ + + L++ F + +++ IQ + L Sbjct: 1069 QLKREKCLIFTQWIDMIRLLEEKFQEEEIWCQVVTGAMSVEQRNKVIQSFEQHPAFTALI 1128 Query: 114 AHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQ 173 + GLNL N + WW+ Q I R + G K+ V V + Sbjct: 1129 LSLRATSTGLNLTM-ANHVFLVDPWWNPAIEDQAIGR-----ADRIGQKKQVNVIRFLCA 1182 Query: 174 NTIDELV-LQRLRTKSTIQDLLLNALKK 200 NTI+E + L + K I+ ++ N KK Sbjct: 1183 NTIEEKINLLHQKKKKMIRKVIANDQKK 1210 >gi|297800006|ref|XP_002867887.1| hypothetical protein ARALYDRAFT_914628 [Arabidopsis lyrata subsp. lyrata] gi|297313723|gb|EFH44146.1| hypothetical protein ARALYDRAFT_914628 [Arabidopsis lyrata subsp. lyrata] Length = 94 Score = 74.6 bits (182), Expect = 7e-12, Method: Composition-based stats. Identities = 23/78 (29%), Positives = 35/78 (44%), Gaps = 6/78 (7%) Query: 115 HPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQN 174 + G GLNL + + WW+ +Q I RI + G KR VFV I ++ Sbjct: 2 SLKAGGVGLNLT-ATSSVFLMDPWWNPAVEEQAIMRI-----HRIGQKRTVFVRRFIVKD 55 Query: 175 TIDELVLQRLRTKSTIQD 192 T++E + Q K + D Sbjct: 56 TVEERMQQVQARKQRMID 73 >gi|229086801|ref|ZP_04218964.1| Uncharacterized ATP-dependent helicase yqhH [Bacillus cereus Rock3-44] gi|228696522|gb|EEL49344.1| Uncharacterized ATP-dependent helicase yqhH [Bacillus cereus Rock3-44] Length = 560 Score = 74.6 bits (182), Expect = 7e-12, Method: Composition-based stats. Identities = 31/168 (18%), Positives = 67/168 (39%), Gaps = 23/168 (13%) Query: 41 YYD--EEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQ-----GRT 93 Y D +K + K +I++ + +++ + + LQ Q Sbjct: 344 YIDVLMDKINHIPFNSKANQALELIKEIDDK-VVIFTEYRATQMYLQWFLKQHGISSVPF 402 Query: 94 LDKDPCTIQEW------NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQM 147 ++W N ++ + G G+NLQ+ + ++ + L W+ +Q Sbjct: 403 RGGFKRGKKDWMKELFQNHAQV---LIATEAGGEGINLQF-CSHMINYDLPWNPMRLEQR 458 Query: 148 IERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 I RI + G K V +Y L ++T++E +L+ L K + + ++ Sbjct: 459 IGRI-----HRLGQKNDVHIYNLATKHTVEEHILKLLYEKINLFERVI 501 >gi|209881905|ref|XP_002142390.1| helicase [Cryptosporidium muris RN66] gi|209557996|gb|EEA08041.1| helicase conserved C-terminal domain-containing protein [Cryptosporidium muris RN66] Length = 836 Score = 74.6 bits (182), Expect = 7e-12, Method: Composition-based stats. Identities = 33/157 (21%), Positives = 64/157 (40%), Gaps = 10/157 (6%) Query: 43 DEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQ 102 D++ H E + A+E I+ K + + + R+ P + ++ + Sbjct: 676 DDKFVIFGHHHEMLDAIETILVKRKRNKSLSEINKHFVYIRIDGKTPGNK---REEYVKE 732 Query: 103 EWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFK 162 N + +CG GLNL G ++F L+W Q +R + G + Sbjct: 733 FQNNINCKVAVLSITACGQGLNLTSAG-TVIFAELYWVPGFMLQAEDRC-----HRMGTQ 786 Query: 163 RAVF-VYYLIAQNTIDELVLQRLRTKSTIQDLLLNAL 198 + ++YL+A+NT+D+ + L K I L+ + Sbjct: 787 YSCINIHYLVAENTLDDKMWGILYKKQKIMASTLDGI 823 >gi|14334972|gb|AAK59663.1| putative chromatin remodelling complex ATPase chain ISWI [Arabidopsis thaliana] Length = 538 Score = 74.6 bits (182), Expect = 7e-12, Method: Composition-based stats. Identities = 20/104 (19%), Positives = 46/104 (44%), Gaps = 8/104 (7%) Query: 95 DKDPCTIQEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIG 152 D+ +I+ +N+ + + + G G+NL ++++ + W+ + Q Sbjct: 17 DERDASIEAYNKPGSEKFVFLLSTRAGGLGINL-ATADVVILYDSDWNPQVDLQA----- 70 Query: 153 VTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 R + G K+ V V+ +N I+ V++R K + L++ Sbjct: 71 QDRAHRIGQKKEVQVFRFCTENAIEAKVIERAYKKLALDALVIQ 114 >gi|228992971|ref|ZP_04152895.1| Uncharacterized ATP-dependent helicase yqhH [Bacillus pseudomycoides DSM 12442] gi|228999020|ref|ZP_04158602.1| Uncharacterized ATP-dependent helicase yqhH [Bacillus mycoides Rock3-17] gi|229006568|ref|ZP_04164204.1| Uncharacterized ATP-dependent helicase yqhH [Bacillus mycoides Rock1-4] gi|228754707|gb|EEM04116.1| Uncharacterized ATP-dependent helicase yqhH [Bacillus mycoides Rock1-4] gi|228760637|gb|EEM09601.1| Uncharacterized ATP-dependent helicase yqhH [Bacillus mycoides Rock3-17] gi|228766828|gb|EEM15467.1| Uncharacterized ATP-dependent helicase yqhH [Bacillus pseudomycoides DSM 12442] Length = 560 Score = 74.6 bits (182), Expect = 7e-12, Method: Composition-based stats. Identities = 31/168 (18%), Positives = 67/168 (39%), Gaps = 23/168 (13%) Query: 41 YYD--EEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQ-----GRT 93 Y D +K + K +I++ + +++ + + LQ Q Sbjct: 344 YIDVLMDKINHIPFNTKANQALELIKEIDDK-VVIFTEYRATQMYLQWFLKQHGISSVPF 402 Query: 94 LDKDPCTIQEW------NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQM 147 ++W N ++ + G G+NLQ+ + ++ + L W+ +Q Sbjct: 403 RGGFKRGKKDWMKELFQNHAQV---LIATEAGGEGINLQF-CSHMINYDLPWNPMRLEQR 458 Query: 148 IERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 I RI + G K V +Y L ++T++E +L+ L K + + ++ Sbjct: 459 IGRI-----HRLGQKNDVHIYNLATKHTVEEHILKLLYEKINLFERVI 501 >gi|322499423|emb|CBZ34496.1| unnamed protein product [Leishmania donovani BPK282A1] Length = 1273 Score = 74.6 bits (182), Expect = 8e-12, Method: Composition-based stats. Identities = 33/204 (16%), Positives = 76/204 (37%), Gaps = 15/204 (7%) Query: 9 RELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKAN- 67 EL K + ++L A+ DE+ + + + LE +I K N Sbjct: 780 EELCVPPSLNYTPLLEDGVKLLVAIKLVAAAMARDEKVLLFSLSTQLLTFLESMIAKVNI 839 Query: 68 --AAPII-VAYHFNSDL-ARLQKAFPQGRT-LDKDPCTIQEWNEGKIP-LLFAHPASCGH 121 P+ + + L R++ G + +++++ P L + G Sbjct: 840 EWRRPVAALQRQQHPQLPRRIRYCRLDGSHSAAQRAAMLEDFDRPDGPELFLLSTKAGGV 899 Query: 122 GLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVL 181 G+ + ++ ++ + QQ I R + G R V+VY L+ T++ + Sbjct: 900 GITVT-AATRVILVDTSFNPADDQQAIGR-----AYRYGQTRPVYVYRLMCYPTLEYSIF 953 Query: 182 QRLRTKSTIQDLLLN--ALKKETI 203 + K + ++ ++K++ + Sbjct: 954 VQKLAKEWLFKTVIEESSVKRDGL 977 >gi|154302115|ref|XP_001551468.1| hypothetical protein BC1G_09738 [Botryotinia fuckeliana B05.10] gi|150855512|gb|EDN30704.1| hypothetical protein BC1G_09738 [Botryotinia fuckeliana B05.10] Length = 1176 Score = 74.6 bits (182), Expect = 8e-12, Method: Composition-based stats. Identities = 36/206 (17%), Positives = 73/206 (35%), Gaps = 21/206 (10%) Query: 11 LYCDLQGENIEAFNSASKTVKCLQLANGAV--YYDEEKHWKEVHDEKIKALEVIIEKANA 68 ++ L+ E ++ + K A + Y + + + + + + N Sbjct: 957 MFFSLKQEEVDKEEESRLKTKESAKAGKDLSNYGGPHTKTIALIHDLLASRKESQARPNE 1016 Query: 69 API--IVAYHFNSDLARLQ-----KAFPQGR-----TLDKDPCTIQEW-NEGKIPLLFAH 115 PI +V + + L +Q P R T ++ + + I ++ Sbjct: 1017 PPIKSVVFSGWTTHLDLIQLALQENNIPYTRLDGKMTRIARSMAMENFREDPSIVVILVS 1076 Query: 116 PASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNT 175 A+ G GLNL + V ++ Q I+R+ + G KR V I + Sbjct: 1077 IAAGGLGLNLTTANKVYVM-EPQFNPAAEAQAIDRV-----HRLGQKREVQTVRFIMNKS 1130 Query: 176 IDELVLQRLRTKSTIQDLLLNALKKE 201 +E +LQ K + L +++ K Sbjct: 1131 FEEKMLQIQDKKQKLASLSMDSQKGR 1156 >gi|124513860|ref|XP_001350286.1| DNA helicase, putative [Plasmodium falciparum 3D7] gi|23615703|emb|CAD52695.1| DNA helicase, putative [Plasmodium falciparum 3D7] Length = 906 Score = 74.6 bits (182), Expect = 8e-12, Method: Composition-based stats. Identities = 37/160 (23%), Positives = 67/160 (41%), Gaps = 20/160 (12%) Query: 54 EKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQKAFPQGR----------TLDKDPCTI 101 K+KA++ I ++ H + ++ + + ++K I Sbjct: 644 AKVKAIKEYISYLIDADIKFLLFCHHKLVMDEVETFLKEQKCSYIRVDGLTPMEKREIYI 703 Query: 102 QEW-NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 + + N+ + + +CG GLNL N +VF L+W + Q +R + G Sbjct: 704 KNFQNDDNVKIALLSITACGMGLNLT-AANTVVFGELFWVPGQIIQAEDR-----AHRIG 757 Query: 161 FKRAVF-VYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 V ++YLIAQNTIDE+V + + K LN ++ Sbjct: 758 TAHDVVNIHYLIAQNTIDEIVWKIINRKWNTLTTALNGIE 797 >gi|154283191|ref|XP_001542391.1| hypothetical protein HCAG_02562 [Ajellomyces capsulatus NAm1] gi|150410571|gb|EDN05959.1| hypothetical protein HCAG_02562 [Ajellomyces capsulatus NAm1] Length = 1128 Score = 74.6 bits (182), Expect = 8e-12, Method: Composition-based stats. Identities = 20/79 (25%), Positives = 32/79 (40%), Gaps = 6/79 (7%) Query: 116 PASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNT 175 + G GLNL N + WW Q I+R+ + G + V V I +++ Sbjct: 936 LRAGGVGLNLT-AANQVFMMDPWWSFATEAQAIDRV-----HRMGQLKDVTVTRFIVKDS 989 Query: 176 IDELVLQRLRTKSTIQDLL 194 I+ +L+ K I L Sbjct: 990 IEGRILRIQERKMMIAGSL 1008 >gi|291391484|ref|XP_002712469.1| PREDICTED: zinc finger, RAN-binding domain containing 3 [Oryctolagus cuniculus] Length = 1062 Score = 74.6 bits (182), Expect = 8e-12, Method: Composition-based stats. Identities = 35/167 (20%), Positives = 65/167 (38%), Gaps = 20/167 (11%) Query: 49 KEVHDEKIKALEVIIE---KANAAPIIVAYHFNSDLARLQKAFPQGRTL----------- 94 K+ K A++ I+ + ++ +V H S L +A + +T Sbjct: 282 KQTAIAKAGAVKDYIKMMLQNDSLKFLVFAHHLSMLQACTEAVIENKTRYIRIDGSVPSS 341 Query: 95 DKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 ++ Q + + + G GL + +VF L+WD +Q +R Sbjct: 342 ERIRLVNQFQKDPDTRVAILSIQAAGQGLTFT-AASHVVFAELYWDPGHIKQAEDR---- 396 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 + G +V ++YLIA T+D L+ L K+ + LN K+ Sbjct: 397 -AHRIGQCSSVNIHYLIANGTLDTLMWGMLNRKAQVTGSTLNGRKER 442 >gi|239977350|sp|Q4QFY1|JBP2_LEIMA RecName: Full=Bifunctional helicase and thymine dioxygenase JBP2; AltName: Full=J-binding protein 2; Includes: RecName: Full=Probable DNA helicase JBP2; Includes: RecName: Full=Thymine dioxygenase JBP2 Length = 1098 Score = 74.6 bits (182), Expect = 8e-12, Method: Composition-based stats. Identities = 31/156 (19%), Positives = 58/156 (37%), Gaps = 20/156 (12%) Query: 53 DEKIKALEVII--EKANAAPIIVAYHFNSDLARLQKAFPQGRT----------LDKDPCT 100 K++ L I+ +A +IV + + + R D+ Sbjct: 892 SGKMRVLVDIVLRVQARKEKLIVFSLYVGSQDLIHRTLTALRVCTFTVRGRDSQDRRRRA 951 Query: 101 IQEW-NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQA 159 +QE+ + +L +GL+ N +V F WW+ + Q I R + Sbjct: 952 MQEFSENKDLIVLVLSTKIAAYGLDFT-AANHVVLFDSWWNPQVDAQAIAR-----AYRR 1005 Query: 160 GFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 ++ V VY LI+ T ++ VL+ K + +L Sbjct: 1006 NQRKPVTVYRLISA-TENKFVLRSQTRKIALFKCIL 1040 >gi|301608898|ref|XP_002934016.1| PREDICTED: zinc finger Ran-binding domain-containing protein 3-like, partial [Xenopus (Silurana) tropicalis] Length = 489 Score = 74.6 bits (182), Expect = 8e-12, Method: Composition-based stats. Identities = 32/153 (20%), Positives = 60/153 (39%), Gaps = 20/153 (13%) Query: 49 KEVHDEKIKALEVIIE---KANAAPIIVAYHFNSDLARLQKAFPQGRTL----------- 94 K+ K A++ I+ + + +V H S L +A + + Sbjct: 343 KQTALAKAGAVKDYIKMMLENDKLKFLVFAHHLSMLQACTEAAIESKARYIRIDGSVPSS 402 Query: 95 DKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 ++ Q N+ + + + G GL + +VF L+WD +Q +R Sbjct: 403 ERIHLVHQFQNDPETRVAILSIQAAGQGLTFTAATH-VVFAELYWDPGHIKQAEDR---- 457 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTK 187 + G +V ++YLIA+ T+D L+ L K Sbjct: 458 -AHRIGQCSSVHIHYLIARGTMDTLMWGMLNRK 489 >gi|118390229|ref|XP_001028105.1| SNF2 family N-terminal domain containing protein [Tetrahymena thermophila] gi|89309875|gb|EAS07863.1| SNF2 family N-terminal domain containing protein [Tetrahymena thermophila SB210] Length = 1895 Score = 74.6 bits (182), Expect = 9e-12, Method: Composition-based stats. Identities = 25/144 (17%), Positives = 53/144 (36%), Gaps = 29/144 (20%) Query: 67 NAAPIIVAYHFNSDLARLQKAFPQGRT-------------LDKDPCTIQEWNEG-KIPLL 112 N +++ F L + + K I ++NE + ++ Sbjct: 1701 NKNKVLIFSRFKETLQLICDQLLNTEFSHIKYLKLDGNVQVSKRYAIINKFNEDSECKIM 1760 Query: 113 FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIA 172 + G GLNL N+++ F ++ Q I+R + G +I Sbjct: 1761 LLTTSVGGLGLNLT-SANVVIMFDHNYNPMNDLQAIDR-----AHRIG---------MIT 1805 Query: 173 QNTIDELVLQRLRTKSTIQDLLLN 196 ++T++E ++ R K I + ++N Sbjct: 1806 KDTLEERIMGIQRFKINIANAIIN 1829 >gi|328862456|gb|EGG11557.1| hypothetical protein MELLADRAFT_91139 [Melampsora larici-populina 98AG31] Length = 152 Score = 74.6 bits (182), Expect = 9e-12, Method: Composition-based stats. Identities = 19/104 (18%), Positives = 45/104 (43%), Gaps = 6/104 (5%) Query: 92 RTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERI 151 +T + + N KI + G GLN+ + + W+ + QQ I+R+ Sbjct: 19 KTQQRTWQLTRFQNNIKIEAFIVSIEAGGVGLNMTC-ADEVYLMDAHWNPQIVQQAIDRL 77 Query: 152 GVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 Q G V VY+++A ++++ + + ++++ ++ Sbjct: 78 -----HQIGQTHPVKVYHVVAGESVEQHLFNVQKKEASLARKVI 116 >gi|315052578|ref|XP_003175663.1| DNA repair protein RAD5 [Arthroderma gypseum CBS 118893] gi|311340978|gb|EFR00181.1| DNA repair protein RAD5 [Arthroderma gypseum CBS 118893] Length = 1073 Score = 74.6 bits (182), Expect = 9e-12, Method: Composition-based stats. Identities = 28/154 (18%), Positives = 61/154 (39%), Gaps = 21/154 (13%) Query: 51 VHDEKIKALEVII----EKANAAPIIVAYHFNSDLARLQ---------KAFPQGRTLDKD 97 + K++A++ + +++ I + F ++ L G+ + Sbjct: 863 IPSAKLRAVKTFVSRWLKESPGTKITIFTQFIGMISALCTLCDVEGWGYTTLCGKIHHRT 922 Query: 98 PCT-IQEWNEGK-IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTR 155 + I+ + E K +L + + G GLNL N + LWW+ QQ R+ Sbjct: 923 RHSNIKRFREDKNTSILISSLKTGGVGLNLTM-ANKCILVDLWWNEAIEQQAFCRLF--- 978 Query: 156 QRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKST 189 + G ++ V + + +NT+D+ + K+ Sbjct: 979 --RIGQEKDVEIVRICVENTVDDRLQLIQSVKTK 1010 >gi|149915099|ref|ZP_01903627.1| helicase/SNF2 family domain protein [Roseobacter sp. AzwK-3b] gi|149810820|gb|EDM70659.1| helicase/SNF2 family domain protein [Roseobacter sp. AzwK-3b] Length = 871 Score = 74.6 bits (182), Expect = 9e-12, Method: Composition-based stats. Identities = 35/179 (19%), Positives = 65/179 (36%), Gaps = 34/179 (18%) Query: 49 KEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQ------GRTLDKDPCT 100 K + K+ L +IE A P++ + + A + K + ++ D Sbjct: 432 KVESETKVTKLVDLIETRLAPEEPVLFFTEYKATQALVHKTLEEKFGKGCVGFINGDERL 491 Query: 101 I-------------------QEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDL 141 + +++N G+ + G G++LQ LV L W+ Sbjct: 492 VVSGPNDQETILQYPRDKAAEDFNGGRTR-FLISTEAGGEGIDLQDRCATLVHVDLPWNP 550 Query: 142 EEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTK-STIQDLLLNALK 199 Q + R+ + G KRAV VY + T++ + L K IQ L +++ Sbjct: 551 MRLHQRVGRLN-----RYGQKRAVQVYLMRNPETVEARIWALLEEKLGRIQAALSASME 604 >gi|224009872|ref|XP_002293894.1| predicted protein [Thalassiosira pseudonana CCMP1335] gi|220970566|gb|EED88903.1| predicted protein [Thalassiosira pseudonana CCMP1335] Length = 718 Score = 74.2 bits (181), Expect = 9e-12, Method: Composition-based stats. Identities = 26/128 (20%), Positives = 47/128 (36%), Gaps = 14/128 (10%) Query: 69 APIIVAYHFNSDLARLQKAFPQG--------RTLDKDPCTIQEWNEGKIPLLFAHPASCG 120 ++V H + L +AF + + N+ L + G Sbjct: 372 EKVVVFAHHRQLIMDLVEAFGDSCVHIIGGMDAKSRAEAVQRFQNDASCRLFIGSIRAAG 431 Query: 121 HGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELV 180 GL L + +VF L W Q +R + G + +V V Y + + ++DE + Sbjct: 432 VGLTLTASSH-VVFLELDWSPSIMTQAEDRC-----HRVGQQDSVLVEYFVFKGSLDEWM 485 Query: 181 LQRLRTKS 188 ++L KS Sbjct: 486 ARQLAEKS 493 >gi|167539902|ref|XP_001741408.1| hypothetical protein [Entamoeba dispar SAW760] gi|165894110|gb|EDR22194.1| hypothetical protein, conserved [Entamoeba dispar SAW760] Length = 956 Score = 74.2 bits (181), Expect = 9e-12, Method: Composition-based stats. Identities = 31/158 (19%), Positives = 62/158 (39%), Gaps = 19/158 (12%) Query: 53 DEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQKAFPQGRT----LDK------DPCT 100 K+K + ++K ++V H L ++ + +D Sbjct: 401 TAKLKGVCSFLDKMIIEGKKLLVFGHHQEMLDGIENYIKESNIEYIRIDGSTNASLRAKY 460 Query: 101 IQEWNEGK-IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQA 159 + + + K I + + G G+ L + + +VF L+W +Q +R+ + Sbjct: 461 VDRFQKEKRIRIAILSVTAAGTGITL-HSADTVVFAELYWTPGVLRQAEDRV-----HRI 514 Query: 160 GFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 G K V ++YLI + T+D+L+ L K I L+ Sbjct: 515 GQKNDVRIFYLIGKQTVDDLIWPLLEKKLKISGETLDG 552 >gi|311030891|ref|ZP_07708981.1| ATP-dependent RNA helicase [Bacillus sp. m3-13] Length = 565 Score = 74.2 bits (181), Expect = 9e-12, Method: Composition-based stats. Identities = 36/160 (22%), Positives = 68/160 (42%), Gaps = 17/160 (10%) Query: 45 EKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQ---------GRTLD 95 EK + K + + +I+K +I+ + + LQ Q G Sbjct: 352 EKIDLVGRNSKAEKVLELIQKVKDK-VIIFTEYRATQMYLQWFLKQNGITSVPFRGGFKR 410 Query: 96 KDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTR 155 ++E + + +L A + G G+NLQ+ N ++ F L W+ +Q I RI Sbjct: 411 GKKDWMRELFKNHVQVLIA-TEAGGEGINLQF-CNHIINFDLPWNPMRLEQRIGRI---- 464 Query: 156 QRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 + G +R V +Y NT++E +L+ L K + + ++ Sbjct: 465 -HRLGQERDVNIYNFATNNTVEEHILKLLYEKINLFERVI 503 >gi|224056086|ref|XP_002194081.1| PREDICTED: zinc finger, RAN-binding domain containing 3 [Taeniopygia guttata] Length = 1026 Score = 74.2 bits (181), Expect = 9e-12, Method: Composition-based stats. Identities = 34/171 (19%), Positives = 67/171 (39%), Gaps = 20/171 (11%) Query: 46 KHWKEVHDEKIKALEVIIEKA---NAAPIIVAYHFNSDLARLQKAFPQGRTL-------- 94 + +KE K A++ I+ + +V H S L +A + + Sbjct: 314 RMYKETAIAKAGAVKDYIKMMLDNDKLKFLVFAHHLSMLQACTEAVIESKARYIRIDGSV 373 Query: 95 ---DKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERI 151 ++ Q + + + + G GL + +VF L+WD +Q +R Sbjct: 374 PSAERIHLVNQFQKDPETRVAILSIQAAGQGLTFTAATH-VVFAELYWDPGHIKQAEDR- 431 Query: 152 GVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKET 202 + G +V +++LIA+ T+D L+ L K+ + LN K++ Sbjct: 432 ----AHRIGQCSSVNIHFLIAKGTMDTLMWAMLNRKAKVTGSTLNGKKEKM 478 >gi|157866423|ref|XP_001687603.1| j-binding protein [Leishmania major strain Friedlin] gi|68125217|emb|CAJ02566.1| putative j-binding protein [Leishmania major strain Friedlin] Length = 1022 Score = 74.2 bits (181), Expect = 9e-12, Method: Composition-based stats. Identities = 31/156 (19%), Positives = 58/156 (37%), Gaps = 20/156 (12%) Query: 53 DEKIKALEVII--EKANAAPIIVAYHFNSDLARLQKAFPQGRT----------LDKDPCT 100 K++ L I+ +A +IV + + + R D+ Sbjct: 816 SGKMRVLVDIVLRVQARKEKLIVFSLYVGSQDLIHRTLTALRVCTFTVRGRDSQDRRRRA 875 Query: 101 IQEW-NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQA 159 +QE+ + +L +GL+ N +V F WW+ + Q I R + Sbjct: 876 MQEFSENKDLIVLVLSTKIAAYGLDFT-AANHVVLFDSWWNPQVDAQAIAR-----AYRR 929 Query: 160 GFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 ++ V VY LI+ T ++ VL+ K + +L Sbjct: 930 NQRKPVTVYRLISA-TENKFVLRSQTRKIALFKCIL 964 >gi|167395605|ref|XP_001741658.1| DNA repair and recombination protein RAD54B [Entamoeba dispar SAW760] gi|165893723|gb|EDR21860.1| DNA repair and recombination protein RAD54B, putative [Entamoeba dispar SAW760] Length = 837 Score = 74.2 bits (181), Expect = 9e-12, Method: Composition-based stats. Identities = 27/137 (19%), Positives = 49/137 (35%), Gaps = 19/137 (13%) Query: 62 IIEKANAAPIIVAYHFNSDLARLQKAFPQGRTL----DKDPCT------IQEWNE-GKIP 110 + EK N +++ + L + L D D ++ +N Sbjct: 464 MCEKTNEK-VLLFSQYQRTLDSISDLLQSKDILFLRIDGDLDDGLRKERLRRFNHMSSWG 522 Query: 111 LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYL 170 +L GLN+ G + +V F W I V R + G K+ V Y + Sbjct: 523 VLLMTIRVGACGLNIT-GASRVVIFDEGWS------TIGNQAVDRAYRIGQKKDVVTYRI 575 Query: 171 IAQNTIDELVLQRLRTK 187 ++ T++E + +R K Sbjct: 576 VSCGTVEEKMYRRQVHK 592 >gi|156062442|ref|XP_001597143.1| hypothetical protein SS1G_01337 [Sclerotinia sclerotiorum 1980] gi|154696673|gb|EDN96411.1| hypothetical protein SS1G_01337 [Sclerotinia sclerotiorum 1980 UF-70] Length = 1130 Score = 74.2 bits (181), Expect = 9e-12, Method: Composition-based stats. Identities = 27/141 (19%), Positives = 53/141 (37%), Gaps = 17/141 (12%) Query: 72 IVAYHFNSDLARLQ-----KAFPQGR-----TLDKDPCTIQEW-NEGKIPLLFAHPASCG 120 +V + S L +Q P R T ++ + + I ++ ++ G Sbjct: 976 VVFSGWTSHLDLIQFALQENNIPYTRLDGKMTRIARSNAMENFREDPTIVVILVSISAGG 1035 Query: 121 HGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELV 180 GLNL + V ++ Q I+R+ + G +R V I N+ +E + Sbjct: 1036 LGLNLTTANKVYVM-EPQFNPAAEAQAIDRV-----HRLGQRREVQTVRFIMNNSFEEKM 1089 Query: 181 LQRLRTKSTIQDLLLNALKKE 201 L+ K + L +++ K Sbjct: 1090 LKIQDKKQKLASLSMDSQKGR 1110 >gi|154315820|ref|XP_001557232.1| hypothetical protein BC1G_04482 [Botryotinia fuckeliana B05.10] gi|150846878|gb|EDN22071.1| hypothetical protein BC1G_04482 [Botryotinia fuckeliana B05.10] Length = 1660 Score = 74.2 bits (181), Expect = 9e-12, Method: Composition-based stats. Identities = 21/110 (19%), Positives = 48/110 (43%), Gaps = 9/110 (8%) Query: 91 GRTLDKDPCTIQEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMI 148 TL+K I +N ++ + G G+NL + ++ ++ + Q + Sbjct: 745 VSTLEKQKR-IDAFNAPNSELFAFLLSTRAGGVGINL-ATADTVIIMDPDFNPHQDIQAL 802 Query: 149 ERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNAL 198 R + G K+ V V+ L+ +++ +E ++Q R K + L+ ++ Sbjct: 803 SR-----AHRIGQKKKVLVFQLVTKDSAEEQIVQVGRKKMALDQALIESI 847 >gi|322787016|gb|EFZ13240.1| hypothetical protein SINV_08607 [Solenopsis invicta] Length = 1002 Score = 74.2 bits (181), Expect = 9e-12, Method: Composition-based stats. Identities = 36/171 (21%), Positives = 65/171 (38%), Gaps = 18/171 (10%) Query: 44 EEKHWKEVHDEKIKALEVIIEKANAAPIIVAYH------FNSDLARLQKA----FPQGRT 93 ++ + + ++ I++K N IIV+ S L+ ++ A F Sbjct: 824 DDDRISSKMRKLLDTVKEILQKGNDKLIIVSQWAMLLEVIASHLSSIKGATYSKFTGSVA 883 Query: 94 LDKDPCTIQEWNEGKI--PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERI 151 + I+ +N +L + G GGN L+ F + W+ + Q +RI Sbjct: 884 IKDRQNVIESFNRPNSGPRILLLSL-TAGGVGLNLVGGNYLLLFDIHWNPQLESQAQDRI 942 Query: 152 GVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKET 202 + G K+ V+VY + NTI+E + K I +L K Sbjct: 943 -----YRFGQKKNVYVYKFVCVNTIEERIKALQERKLEIAKNVLTGDKAAV 988 >gi|239977351|sp|A4HVU6|JBP2_LEIIN RecName: Full=Bifunctional helicase and thymine dioxygenase JBP2; AltName: Full=J-binding protein 2; Includes: RecName: Full=Probable DNA helicase JBP2; Includes: RecName: Full=Thymine dioxygenase JBP2 Length = 1098 Score = 74.2 bits (181), Expect = 9e-12, Method: Composition-based stats. Identities = 30/156 (19%), Positives = 58/156 (37%), Gaps = 20/156 (12%) Query: 53 DEKIKALEVII--EKANAAPIIVAYHFNSDLARLQKAFPQGRT----------LDKDPCT 100 K++ L I+ +A +I+ + + + R D+ Sbjct: 892 SGKMRVLVDIVLRVQARKEKLIIFSLYVGSQDLIHRTLTALRVCTFTVRGRDSQDRRRRA 951 Query: 101 IQEW-NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQA 159 +QE+ + +L +GL+ N +V F WW+ + Q I R + Sbjct: 952 MQEFSENKDLIVLVLSTKIAAYGLDFT-AANHVVLFDSWWNPQVDAQAIAR-----AYRR 1005 Query: 160 GFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 ++ V VY LI+ T ++ VL+ K + +L Sbjct: 1006 NQRKPVTVYRLISA-TENKFVLRSQTRKIALFKCIL 1040 >gi|268535648|ref|XP_002632959.1| C. briggsae CBR-RAD-26 protein [Caenorhabditis briggsae] Length = 1382 Score = 74.2 bits (181), Expect = 9e-12, Method: Composition-based stats. Identities = 29/173 (16%), Positives = 61/173 (35%), Gaps = 34/173 (19%) Query: 58 ALEVIIEKAN-AAPIIVAYHFNSDLARLQKAFPQGRTLDKD------------------- 97 ALE++ E I++ + L L++ + + + K+ Sbjct: 891 ALEILDESTKIGEKILIFSQNLTALDMLEEILRKRQVVKKEKSEHQERWEKNRNYLRLDG 950 Query: 98 -------PCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIE 149 I +N E + L + G+NL N + W+ Q + Sbjct: 951 TTSGADREKLINRFNSEPGLHLFLISTRAGSLGINL-VSANRCIIIDACWNPCHDAQAV- 1008 Query: 150 RIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKET 202 R + G ++ FVY LI N+++ + R +K +Q +++ + + Sbjct: 1009 ----CRVYRYGQQKKTFVYRLIMDNSMERSIFNRQISKHGLQQRVVDDAQVDA 1057 >gi|26340760|dbj|BAC34042.1| unnamed protein product [Mus musculus] Length = 904 Score = 74.2 bits (181), Expect = 9e-12, Method: Composition-based stats. Identities = 41/215 (19%), Positives = 85/215 (39%), Gaps = 25/215 (11%) Query: 6 KFQRELYCDLQGENIEAFNSA-SKTVKCLQLANG----AVYYDEEKHWKEVHDEKIKALE 60 K ++ + DL ++ N++ + K ++ N V + +K+ K A++ Sbjct: 103 KVRQRIPFDLPPAAVKELNASFEEWQKLMRAPNSGAMETVMGLMTRMFKQTAIAKAGAVK 162 Query: 61 VIIE---KANAAPIIVAYHFNSDLARLQKAFPQGRTL-----------DKDPCTIQEWNE 106 I+ + ++ +V H S L +A + ++ ++ Q + Sbjct: 163 DYIKMLLQNDSLKFLVFAHHLSMLQACTEAVIESKSRYIRIDGSVPSSERIHLVNQFQKD 222 Query: 107 GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVF 166 + + G GL + +VF L+WD +Q +R + G +V Sbjct: 223 PDTRVAILSIQAAGQGLTFT-AASHVVFAELYWDPGHIKQAEDR-----AHRIGQCSSVN 276 Query: 167 VYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 ++YLIA T+D L+ L K+ + LN K++ Sbjct: 277 IHYLIANGTLDSLMWAMLNRKAQVTGSTLNGRKEK 311 >gi|146081173|ref|XP_001464187.1| j-binding protein [Leishmania infantum JPCM5] gi|134068278|emb|CAM66564.1| putative j-binding protein [Leishmania infantum JPCM5] Length = 1022 Score = 74.2 bits (181), Expect = 9e-12, Method: Composition-based stats. Identities = 30/156 (19%), Positives = 58/156 (37%), Gaps = 20/156 (12%) Query: 53 DEKIKALEVII--EKANAAPIIVAYHFNSDLARLQKAFPQGRT----------LDKDPCT 100 K++ L I+ +A +I+ + + + R D+ Sbjct: 816 SGKMRVLVDIVLRVQARKEKLIIFSLYVGSQDLIHRTLTALRVCTFTVRGRDSQDRRRRA 875 Query: 101 IQEW-NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQA 159 +QE+ + +L +GL+ N +V F WW+ + Q I R + Sbjct: 876 MQEFSENKDLIVLVLSTKIAAYGLDFT-AANHVVLFDSWWNPQVDAQAIAR-----AYRR 929 Query: 160 GFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 ++ V VY LI+ T ++ VL+ K + +L Sbjct: 930 NQRKPVTVYRLISA-TENKFVLRSQTRKIALFKCIL 964 >gi|330900255|gb|EGH31674.1| SNF2-related:helicase [Pseudomonas syringae pv. japonica str. M301072PT] Length = 244 Score = 74.2 bits (181), Expect = 1e-11, Method: Composition-based stats. Identities = 29/154 (18%), Positives = 58/154 (37%), Gaps = 18/154 (11%) Query: 55 KIKALEVIIEKAN-AAPIIVAYHFNSDLARLQKAFPQGRT----------LDKDPCTIQE 103 K++ L ++ + + +I+ + +A L++ + K I Sbjct: 82 KVRILADLMAELDVDDKVILFCEYQESVATLREHCLKLGVGCVTLVGSDSPKKRQKAIDA 141 Query: 104 WN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFK 162 + + + ++ G G NL N + F L W Q +R + G Sbjct: 142 FQQDPDCRVFIGTRSAAGTGYNLT-AANYVFFLGLPWTPGLQDQAEDR-----AYRNGQL 195 Query: 163 RAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 R V V +A++TID+ + Q L K + L++ Sbjct: 196 RMVVVKIPLAEDTIDQQLWQMLMDKRALASDLID 229 >gi|308468126|ref|XP_003096307.1| CRE-RAD-26 protein [Caenorhabditis remanei] gi|308243350|gb|EFO87302.1| CRE-RAD-26 protein [Caenorhabditis remanei] Length = 1304 Score = 74.2 bits (181), Expect = 1e-11, Method: Composition-based stats. Identities = 28/178 (15%), Positives = 61/178 (34%), Gaps = 33/178 (18%) Query: 52 HDEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQKAFPQGRTLDK------------- 96 + KI I++++ I++ + L L++ + + K Sbjct: 807 NGYKIVVALEILDESTCIGEKILIFSQNLTALDMLEEILRKRQINGKNGPGERWEKNRNY 866 Query: 97 -----------DPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEH 144 I +N E + L + G+NL N + W+ Sbjct: 867 LRLDGTTSGADREKLINRFNSEPGLHLFLISTRAGSLGINL-VSANRCIIIDACWNPCHD 925 Query: 145 QQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKET 202 Q + R + G ++ FVY LI N+++ + R +K +Q +++ + + Sbjct: 926 AQAV-----CRVYRYGQQKKTFVYRLIMDNSMERSIFNRQISKHGLQQRVVDDAQVDA 978 >gi|322497591|emb|CBZ32664.1| unnamed protein product [Leishmania donovani BPK282A1] Length = 1022 Score = 74.2 bits (181), Expect = 1e-11, Method: Composition-based stats. Identities = 30/156 (19%), Positives = 58/156 (37%), Gaps = 20/156 (12%) Query: 53 DEKIKALEVII--EKANAAPIIVAYHFNSDLARLQKAFPQGRT----------LDKDPCT 100 K++ L I+ +A +I+ + + + R D+ Sbjct: 816 SGKMRVLVDIVLRVQARKEKLIIFSLYVGSQDLIHRTLTALRVCTFTVRGRDSQDRRRRA 875 Query: 101 IQEW-NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQA 159 +QE+ + +L +GL+ N +V F WW+ + Q I R + Sbjct: 876 MQEFSENKDLIVLVLSTKIAAYGLDFT-AANHVVLFDSWWNPQVDAQAIAR-----AYRR 929 Query: 160 GFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 ++ V VY LI+ T ++ VL+ K + +L Sbjct: 930 NQRKPVTVYRLISA-TENKFVLRSQTRKIALFKCIL 964 >gi|297745316|emb|CBI40396.3| unnamed protein product [Vitis vinifera] Length = 1981 Score = 74.2 bits (181), Expect = 1e-11, Method: Composition-based stats. Identities = 27/121 (22%), Positives = 48/121 (39%), Gaps = 12/121 (9%) Query: 82 ARLQKAFPQGRT-LDKDPCTIQEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLW 138 RL G T L+ I ++N + + G GLNLQ + +V + Sbjct: 1248 RRLVYRRIDGTTSLEDRESAIVDFNSAGSDCFIFLLSIRAAGRGLNLQ-SADTVVIYDPD 1306 Query: 139 WDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNAL 198 + + +Q + R + G R V V Y+ A + I + + K + D ++NA Sbjct: 1307 PNPKNEEQAVAR-----AHRIGQTREVKVIYMEAVSLIRNNI---QQYKIDMADEVINAG 1358 Query: 199 K 199 + Sbjct: 1359 R 1359 >gi|224127712|ref|XP_002320143.1| hypothetical protein POPTRDRAFT_244585 [Populus trichocarpa] gi|222860916|gb|EEE98458.1| hypothetical protein POPTRDRAFT_244585 [Populus trichocarpa] Length = 434 Score = 74.2 bits (181), Expect = 1e-11, Method: Composition-based stats. Identities = 36/195 (18%), Positives = 73/195 (37%), Gaps = 31/195 (15%) Query: 27 SKTVKCLQL---ANGAV-----YYDEEKHWKEVHDEKIKALEVIIEKAN--AAPIIVAYH 76 + +C++L N + + D K + K+ L+ I+ K +++ Sbjct: 194 TLNNRCMELRKTCNHPLLNYPYFNDLSKDFLVQSCGKLWILDRILIKLQRTGHRVLLFST 253 Query: 77 FNSDLA---------RLQKAFPQGRT-LDKDPCTIQEWN--EGKIPLLFAHPASCGHGLN 124 L RL G T L+ I ++N + + + G GLN Sbjct: 254 MTKLLDILEEYLQWRRLVYRRIDGTTSLEDRESAIVDFNSHDSDCFIFLLSIRAAGRGLN 313 Query: 125 LQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRL 184 LQ + ++ + + + +Q + R + G R V V Y+ A + I + + Sbjct: 314 LQ-SADTVIIYDPDPNPKNEEQAVAR-----AHRIGQTREVKVIYMEAVSLIRKNI---Q 364 Query: 185 RTKSTIQDLLLNALK 199 + K + D ++NA + Sbjct: 365 QYKIDMADEVINAGR 379 >gi|66357602|ref|XP_625979.1| HARP like SWI/SNF ATpase [Cryptosporidium parvum Iowa II] gi|46227244|gb|EAK88194.1| HARP like SWI/SNF ATpase [Cryptosporidium parvum Iowa II] Length = 908 Score = 74.2 bits (181), Expect = 1e-11, Method: Composition-based stats. Identities = 40/222 (18%), Positives = 80/222 (36%), Gaps = 45/222 (20%) Query: 1 MKQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 +K + + C ++ N + +S+S +L + KI ++ Sbjct: 693 IKMIKELLADPNCQVELSNFDEDDSSSSMCNLHKLTC---------------EIKINPVQ 737 Query: 61 VIIE---KANAAPIIVAYHFNSDLARLQKAFPQGRTL-------------------DKDP 98 IE + N ++ H + L ++ + R +K Sbjct: 738 EYIEYLLEYNDEKYVIFGHHHVMLDAIESVLLKKRKTACNSGGPFLFIRIDGKTPGNKRE 797 Query: 99 CTIQEW-NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 ++E+ N + +CG GLNL G ++F L+W Q +R Sbjct: 798 EYVKEFQNNENCKVALLSITACGQGLNLTSAG-TVIFAELYWVPGTMLQAEDRC-----H 851 Query: 158 QAGFKRAVF-VYYLIAQNTIDELVLQRLRTKSTIQDLLLNAL 198 + G + + ++YLIA+ T+D+ + L K I L+ + Sbjct: 852 RIGTQYSCINIHYLIAEETLDDKMWGTLCRKQKIMASTLDGI 893 >gi|297737996|emb|CBI27197.3| unnamed protein product [Vitis vinifera] Length = 1638 Score = 74.2 bits (181), Expect = 1e-11, Method: Composition-based stats. Identities = 21/102 (20%), Positives = 43/102 (42%), Gaps = 7/102 (6%) Query: 96 KDPCTIQEWNEGKIP-LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 I +N+ K + SCG G+NL + ++ + ++ Q + R Sbjct: 572 DRQAAIARFNQDKTRFVFLLSTRSCGLGINL-ATADTVIIYDSDFNPHADIQAMNR---- 626 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + G + VY L+ + +++E +LQ + K + L +N Sbjct: 627 -AHRIGQSNRLLVYRLVVRASVEERILQLAKKKLMLDQLFVN 667 >gi|330966658|gb|EGH66918.1| SNF2-related:helicase [Pseudomonas syringae pv. actinidiae str. M302091] Length = 652 Score = 74.2 bits (181), Expect = 1e-11, Method: Composition-based stats. Identities = 29/154 (18%), Positives = 58/154 (37%), Gaps = 18/154 (11%) Query: 55 KIKALEVIIEKAN-AAPIIVAYHFNSDLARLQKAFPQGRT----------LDKDPCTIQE 103 K++ L ++ + + +I+ + +A L++ + K I Sbjct: 488 KVRILADLMAELDVDDKVILFCEYQESVATLREHCLKMGVGCVTLVGSDSPKKRQKAIDA 547 Query: 104 WN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFK 162 + + + ++ G G NL N + F L W Q +R + G Sbjct: 548 FQQDPDCRVFIGTRSAAGTGYNLT-AANYVFFLGLPWTPGLQDQAEDR-----AYRNGQL 601 Query: 163 RAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 R V V +A++TID+ + Q L K + L++ Sbjct: 602 RMVVVKIPLAEDTIDQQLWQMLMDKRALARDLID 635 >gi|168205333|ref|ZP_02631338.1| putative helicase with SNF2 domain [Clostridium perfringens E str. JGS1987] gi|170663173|gb|EDT15856.1| putative helicase with SNF2 domain [Clostridium perfringens E str. JGS1987] Length = 1015 Score = 74.2 bits (181), Expect = 1e-11, Method: Composition-based stats. Identities = 26/156 (16%), Positives = 61/156 (39%), Gaps = 16/156 (10%) Query: 51 VHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQKAFP-------QGRTLDKDPCTI 101 + EK+K+ + E +++ ++ + + F + + I Sbjct: 841 LAKEKVKSTISLAENLLLENEKVVIFTNYTEPAEKFKNHFKNKAVLINGDVPIKERQKII 900 Query: 102 QEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGF 161 +++ G+ + + + G+ L NI++F + H Q ERI + G Sbjct: 901 EDFQNGESKVFIGNLKAASVGITLTK-ANIVIFNDFDYVPATHIQAEERI-----HRIGQ 954 Query: 162 KRAVFVYYLIAQNT-IDELVLQRLRTKSTIQDLLLN 196 + ++Y A+N IDE + + L K + +++ Sbjct: 955 DKECNIFYNYAENIEIDEWIAEMLEKKFNMISKIVD 990 >gi|170070634|ref|XP_001869654.1| conserved hypothetical protein [Culex quinquefasciatus] gi|167866544|gb|EDS29927.1| conserved hypothetical protein [Culex quinquefasciatus] Length = 104 Score = 74.2 bits (181), Expect = 1e-11, Method: Composition-based stats. Identities = 19/89 (21%), Positives = 41/89 (46%), Gaps = 6/89 (6%) Query: 111 LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYL 170 ++ + G GLNL G N L+ L W+ + Q +R+ + G K+ V+++ Sbjct: 5 IMLLSLTAGGVGLNL-VGANHLMLLDLHWNPQLEAQAQDRV-----YRVGQKKPVYIWKF 58 Query: 171 IAQNTIDELVLQRLRTKSTIQDLLLNALK 199 + +T+++ ++ + K + L K Sbjct: 59 MCTDTVEQKIMGLQQKKLDLATQALTGTK 87 >gi|145607271|ref|XP_361651.2| hypothetical protein MGG_12155 [Magnaporthe oryzae 70-15] gi|145014859|gb|EDJ99427.1| hypothetical protein MGG_12155 [Magnaporthe oryzae 70-15] Length = 1430 Score = 74.2 bits (181), Expect = 1e-11, Method: Composition-based stats. Identities = 32/159 (20%), Positives = 57/159 (35%), Gaps = 26/159 (16%) Query: 50 EVHDEKIKAL-EVIIEKANAAP---IIVAYHFNSDLARLQKAFPQGRTL----------- 94 K A+ ++E + P II+ H+ LAR+ + + Sbjct: 1056 VTPSAKTTAIKMQVLEWLHKYPDDKIIIFTHWVP-LARILGRVFEAEKIRFLYYFGSMGM 1114 Query: 95 DKDPCTIQEWNEGKIPL----LFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 + ++++ PL L A G LNL N ++ LWW+ +ER Sbjct: 1115 GQRKTAVEKFTTIIGPLAPKLLIASSRCGGQALNLT-AANRVILVDLWWNT-----AVER 1168 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKST 189 R + G + + ++ + TIDE +L K Sbjct: 1169 QAFGRVHRIGQTKDTYYVKIVTRKTIDERLLDMQDEKDA 1207 >gi|322489605|emb|CBZ24862.1| putative j-binding protein [Leishmania mexicana MHOM/GT/2001/U1103] Length = 1022 Score = 74.2 bits (181), Expect = 1e-11, Method: Composition-based stats. Identities = 30/156 (19%), Positives = 58/156 (37%), Gaps = 20/156 (12%) Query: 53 DEKIKALEVII--EKANAAPIIVAYHFNSDLARLQKAFPQGRT----------LDKDPCT 100 K++ L I+ +A +I+ + + + R D+ Sbjct: 816 SGKMRVLVDIVLRVQARKEKLIIFSLYVGSQDLIHRTLTALRVCTFTVRGRDSQDRRRRA 875 Query: 101 IQEW-NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQA 159 +QE+ + +L +GL+ N +V F WW+ + Q I R + Sbjct: 876 MQEFSENKDLIVLVLSTKIAAYGLDFT-AANHVVLFDSWWNPQVDAQAIAR-----AYRR 929 Query: 160 GFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 ++ V VY LI+ T ++ VL+ K + +L Sbjct: 930 NQRKPVTVYRLISA-TENKFVLRSQTRKIALFKCIL 964 >gi|146087881|ref|XP_001465933.1| helicase [Leishmania infantum JPCM5] gi|134070034|emb|CAM68366.1| putative helicase-like protein [Leishmania infantum JPCM5] Length = 1273 Score = 74.2 bits (181), Expect = 1e-11, Method: Composition-based stats. Identities = 32/204 (15%), Positives = 72/204 (35%), Gaps = 15/204 (7%) Query: 9 RELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKAN- 67 EL K + ++L A+ DE+ + + + LE +I K N Sbjct: 780 EELCVPPSLNYTPLLEDGVKLLVAIKLVAAAMARDEKVLLFSLSTQLLTFLESMIAKVNI 839 Query: 68 --AAPIIVAYHFNSDL--ARLQKAFPQGRT-LDKDPCTIQEWNEGKIP-LLFAHPASCGH 121 P+ R++ G + +++++ P L + G Sbjct: 840 EWRRPVAALQRQQHPQLPRRIRYCRLDGSHSAAQRAAMLEDFDRPDGPELFLLSTKAGGV 899 Query: 122 GLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVL 181 G+ + ++ ++ + QQ I R + G R V+VY L T++ + Sbjct: 900 GITVT-AATRVILVDTSFNPADDQQAIGR-----AYRYGQTRPVYVYRLTCYPTLEYSIF 953 Query: 182 QRLRTKSTIQDLLLN--ALKKETI 203 + K + ++ ++K++ + Sbjct: 954 VQKLAKEWLFKTVIEESSVKRDGL 977 >gi|126011014|ref|YP_001039764.1| hypothetical protein BcepF1.080 [Burkholderia ambifaria phage BcepF1] gi|119712590|gb|ABL96811.1| unknown [Burkholderia ambifaria phage BcepF1] Length = 525 Score = 74.2 bits (181), Expect = 1e-11, Method: Composition-based stats. Identities = 32/182 (17%), Positives = 72/182 (39%), Gaps = 17/182 (9%) Query: 31 KCLQLANGAVYYD-EEKHWKEVHDEKIKALEVIIEKANAAPII----------VAYHFNS 79 K Q+ +G + + E ++ ++K +E + I+ VA S Sbjct: 349 KMKQVVSGFINVEGEPVLIDPENNPRMKLFSEYMEGVDGQTIVWCLYEVEILQVAEKLRS 408 Query: 80 DLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWW 139 R+ + + + + I ++ G I + H A+ G GL L +++S Sbjct: 409 MGRRVATYYGKTKKGETREKIIDDFQNGLIDDIVGHAAALGIGLTLT-AATTSLYYSCDR 467 Query: 140 DLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 + E Q R + G ++ IA++TIDE ++ K+ + +++++ Sbjct: 468 NNELRLQ-----SEDRNHRIGTVKSPVYVDFIAEDTIDEDDMRGRAFKTELANIVIDRTA 522 Query: 200 KE 201 ++ Sbjct: 523 RK 524 >gi|154286186|ref|XP_001543888.1| predicted protein [Ajellomyces capsulatus NAm1] gi|150407529|gb|EDN03070.1| predicted protein [Ajellomyces capsulatus NAm1] Length = 219 Score = 74.2 bits (181), Expect = 1e-11, Method: Composition-based stats. Identities = 26/104 (25%), Positives = 47/104 (45%), Gaps = 7/104 (6%) Query: 93 TLDKDPCTIQEW-NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERI 151 + + +I+E+ + +I +L + G GL+L N +F LWW+ QQ R+ Sbjct: 2 PIRQREKSIEEFSKDPEIRILVCSLRTAGTGLDLT-AANKCIFVDLWWNEAIEQQAFFRL 60 Query: 152 GVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 + KR V ++ +N+ID+ + KS D +L Sbjct: 61 F-----RINQKRKVEFVRVVVRNSIDDRLQLLQEDKSNNIDGVL 99 >gi|68076919|ref|XP_680379.1| DNA helicase [Plasmodium berghei strain ANKA] gi|56501303|emb|CAH95084.1| DNA helicase, putative [Plasmodium berghei] Length = 835 Score = 74.2 bits (181), Expect = 1e-11, Method: Composition-based stats. Identities = 35/148 (23%), Positives = 62/148 (41%), Gaps = 20/148 (13%) Query: 54 EKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQKAFPQGRT----------LDKDPCTI 101 K+KA++ I ++ H + + + + + +DK I Sbjct: 577 AKVKAIKEYITYLIDADIKFLLFCHHKLVMDEIDEFLKEKKLGFIRVDGLTPIDKREIYI 636 Query: 102 QEWNEG-KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 + + KI + +CG GLNL N +VF L+W + Q +R + G Sbjct: 637 KNFQSDEKIRIALLSITACGVGLNLT-AANTVVFGELYWVPGQMIQAEDR-----AHRIG 690 Query: 161 FKR-AVFVYYLIAQNTIDELVLQRLRTK 187 + ++YL+AQNTIDE+V + + K Sbjct: 691 TTHDTINIHYLVAQNTIDEVVWKIINRK 718 >gi|209489463|gb|ACI49222.1| hypothetical protein Csp3_JD05.007 [Caenorhabditis sp. PS1010] Length = 1195 Score = 74.2 bits (181), Expect = 1e-11, Method: Composition-based stats. Identities = 22/105 (20%), Positives = 43/105 (40%), Gaps = 9/105 (8%) Query: 95 DKDPCTIQEWNEGKI---PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERI 151 K +N+ L+ + G N+ N +V F W+ Q + R+ Sbjct: 854 GKRDAVQTHFNDADNHRARLMLISTRAGSLGTNM-VSANRVVIFDACWNPSHDTQSLFRV 912 Query: 152 GVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + G + V++Y IAQ T++E + +R TK + +++ Sbjct: 913 -----YRFGQTKPVYIYRFIAQGTMEERIYKRQVTKESTSMRVVD 952 >gi|25028310|ref|NP_738364.1| hypothetical protein CE1754 [Corynebacterium efficiens YS-314] gi|259507368|ref|ZP_05750268.1| SNF2 family superfamily II DNA/RNA helicase [Corynebacterium efficiens YS-314] gi|23493595|dbj|BAC18564.1| conserved hypothetical protein [Corynebacterium efficiens YS-314] gi|259165079|gb|EEW49633.1| SNF2 family superfamily II DNA/RNA helicase [Corynebacterium efficiens YS-314] Length = 886 Score = 73.8 bits (180), Expect = 1e-11, Method: Composition-based stats. Identities = 29/153 (18%), Positives = 59/153 (38%), Gaps = 19/153 (12%) Query: 52 HDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKI 109 K+K + ++++A + ++ F L L + R + + ++ ++ Sbjct: 703 TSAKMKRIIELLDEAEEHGRKTLIFTFFLDILDEL-EHVLGARVIGRIDGSVPAARRQEL 761 Query: 110 ----------PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQA 159 L + + G GLN+Q +++ QQ + R+ + Sbjct: 762 VDALADAPAGSALISQITAGGVGLNIQSASQVII-CEPQVKPTIEQQAVARV-----HRM 815 Query: 160 GFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQD 192 G V V+ LI +T DE +L+ L K+ I D Sbjct: 816 GQTATVNVHRLIGDDTADERMLEILAGKTQIFD 848 >gi|328871601|gb|EGG19971.1| SNF2-related domain-containing protein [Dictyostelium fasciculatum] Length = 1331 Score = 73.8 bits (180), Expect = 1e-11, Method: Composition-based stats. Identities = 24/115 (20%), Positives = 49/115 (42%), Gaps = 9/115 (7%) Query: 83 RLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLE 142 R+ + P ++ + N+ K + + G GL L +++VF L+W Sbjct: 870 RIDGSTPPAV---REANVTRFQNQPKCQVALLSITAAGTGLTLT-ASSLVVFAELYWTPG 925 Query: 143 EHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 +Q +R+ + G K V ++YLI + T+D+ + + K + L+ Sbjct: 926 VLRQAEDRV-----HRIGQKNEVNIHYLIGKGTLDDRIWPMICNKLEVIGETLDG 975 >gi|328848317|gb|EGF97545.1| hypothetical protein MELLADRAFT_85092 [Melampsora larici-populina 98AG31] Length = 206 Score = 73.8 bits (180), Expect = 1e-11, Method: Composition-based stats. Identities = 21/95 (22%), Positives = 40/95 (42%), Gaps = 10/95 (10%) Query: 86 KAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQ 145 + PQ RTL + N I + G GLN+ + + W+ + Q Sbjct: 85 EMTPQERTL----QLNRFQNNNNIEAFIVSIEAGGVGLNMTC-ADEVYLMDADWNPQIVQ 139 Query: 146 QMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELV 180 Q I+R+ + G V VY+++A ++++ + Sbjct: 140 QAIDRL-----HRIGQTHPVKVYHVVAGGSVEQHL 169 >gi|322792699|gb|EFZ16567.1| hypothetical protein SINV_11659 [Solenopsis invicta] Length = 81 Score = 73.8 bits (180), Expect = 1e-11, Method: Composition-based stats. Identities = 20/59 (33%), Positives = 32/59 (54%), Gaps = 5/59 (8%) Query: 132 LVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 ++F+ W+ QQ ++R + G + V VY LI + TI+E +LQR R KS + Sbjct: 20 VIFYDSDWNPTVDQQAMDR-----AHRLGQTKQVTVYRLICKGTIEERILQRAREKSEV 73 >gi|17367114|sp|Q9U7E0|ATRX_CAEEL RecName: Full=Transcriptional regulator ATRX homolog; AltName: Full=ATP-dependent helicase xnp-1; AltName: Full=X-linked nuclear protein 1 gi|5901659|gb|AAD55361.1|AF134186_1 XNP-1 [Caenorhabditis elegans] Length = 1359 Score = 73.8 bits (180), Expect = 1e-11, Method: Composition-based stats. Identities = 21/105 (20%), Positives = 44/105 (41%), Gaps = 9/105 (8%) Query: 95 DKDPCTIQEWNEG---KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERI 151 K +N+ + L+ + G N+ N ++ F W+ Q + R+ Sbjct: 1026 GKRDAVQTSFNDPLNLRARLMLISTRAGSLGTNM-VAANRVIIFDACWNPSHDTQSLFRV 1084 Query: 152 GVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + G + V++Y IAQ T++E + +R TK + +++ Sbjct: 1085 -----YRFGQTKPVYIYRFIAQGTMEERIYKRQVTKESTSMRVVD 1124 >gi|288927483|ref|ZP_06421330.1| helicase, Snf2 family [Prevotella sp. oral taxon 317 str. F0108] gi|288330317|gb|EFC68901.1| helicase, Snf2 family [Prevotella sp. oral taxon 317 str. F0108] Length = 859 Score = 73.8 bits (180), Expect = 1e-11, Method: Composition-based stats. Identities = 34/188 (18%), Positives = 76/188 (40%), Gaps = 24/188 (12%) Query: 24 NSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIE---KANAAPIIVAYHFNSD 80 N K + +++ + Y ++K D K+ + I+ ++ ++V + Sbjct: 423 NKLMKYLSQMRMLCDSTYILDQKTR---FDTKVTEVINIVRNVIESGDEKLVVFSQWERM 479 Query: 81 LARLQKAFPQ----------GRTLDKDPCTIQEW-NEGKIPLLFAHPASCGHGLNLQYGG 129 + K + G + + + +E + + GLNLQ Sbjct: 480 TRLVAKELEKEGIGFEYLHGGIPSIRRKDLVNNFMDEPHCRVFL-STDAGSTGLNLQ-AA 537 Query: 130 NILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKST 189 +++V L W+ +Q I R+ + G KR + V L++ T +E +L +L+ KS+ Sbjct: 538 SVVVNVDLPWNPAVLEQRIARV-----YRLGQKRNIQVINLVSAGTFEEDMLDKLKFKSS 592 Query: 190 IQDLLLNA 197 + + +L+ Sbjct: 593 LFEGVLDG 600 >gi|71980419|ref|NP_001020958.1| human XNP gene related family member (xnp-1) [Caenorhabditis elegans] gi|3253105|gb|AAC24256.1| Human xnp gene related protein 1, confirmed by transcript evidence [Caenorhabditis elegans] Length = 1359 Score = 73.8 bits (180), Expect = 1e-11, Method: Composition-based stats. Identities = 21/105 (20%), Positives = 44/105 (41%), Gaps = 9/105 (8%) Query: 95 DKDPCTIQEWNEG---KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERI 151 K +N+ + L+ + G N+ N ++ F W+ Q + R+ Sbjct: 1026 GKRDAVQTSFNDPLNLRARLMLISTRAGSLGTNM-VAANRVIIFDACWNPSHDTQSLFRV 1084 Query: 152 GVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + G + V++Y IAQ T++E + +R TK + +++ Sbjct: 1085 -----YRFGQTKPVYIYRFIAQGTMEERIYKRQVTKESTSMRVVD 1124 >gi|299756092|ref|XP_001829083.2| SHREC complex subunit Mit1 [Coprinopsis cinerea okayama7#130] gi|298411519|gb|EAU92718.2| SHREC complex subunit Mit1 [Coprinopsis cinerea okayama7#130] Length = 1782 Score = 73.8 bits (180), Expect = 1e-11, Method: Composition-based stats. Identities = 21/136 (15%), Positives = 53/136 (38%), Gaps = 22/136 (16%) Query: 66 ANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPC-TIQEWNEG--KIPLLFAHPASCGHG 122 A +++ G T + + E+N+ + + + G G Sbjct: 1185 ARGHRVLLFSQ-------------DGSTKGTERQKCMDEFNKPNSEYFIFLLTTRAGGVG 1231 Query: 123 LNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQ 182 +NL + + ++ F ++ + Q I R + G K V+ L+ +++ +E ++Q Sbjct: 1232 INL-FTADTVIIFDPDFNPHQDLQAIAR-----AYRYGQKNTCLVFKLMVKDSAEERIMQ 1285 Query: 183 RLRTKSTIQDLLLNAL 198 + K + L++ + Sbjct: 1286 IGKKKLVLDHLIVQKM 1301 >gi|302392306|ref|YP_003828126.1| helicase domain protein [Acetohalobium arabaticum DSM 5501] gi|302204383|gb|ADL13061.1| helicase domain protein [Acetohalobium arabaticum DSM 5501] Length = 500 Score = 73.8 bits (180), Expect = 1e-11, Method: Composition-based stats. Identities = 25/152 (16%), Positives = 65/152 (42%), Gaps = 17/152 (11%) Query: 53 DEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQ---------GRTLDKDPCTIQE 103 ++K++ +E ++++ + + + + + + Q G D + Sbjct: 313 NQKVQVVEELLKEIDGQAV-IFTEYLATQNYICYYLYQRGLMPVKFDGTLNDTQKERAKR 371 Query: 104 WNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKR 163 + + + A+ G+NLQ+ N+++ + L W+ + +Q I R+ + G Sbjct: 372 FFAEQGDV-LVSTAAGRQGINLQF-CNVIINYDLPWNPMKLEQRIGRV-----HRLGQTE 424 Query: 164 AVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 V +Y L + TI+E ++ L K + + ++ Sbjct: 425 EVKIYNLCTKGTIEEKIVNVLHDKINLFESVV 456 >gi|317035065|ref|XP_003188905.1| hypothetical protein ANI_1_1382124 [Aspergillus niger CBS 513.88] Length = 282 Score = 73.8 bits (180), Expect = 1e-11, Method: Composition-based stats. Identities = 35/169 (20%), Positives = 66/169 (39%), Gaps = 27/169 (15%) Query: 43 DEEKHWK-----EVHDEKIKALEVIIEK--ANAAP--IIVAYHFNSDLARLQ-----KAF 88 DE+ W + K+ + I+ + A +P I++ F + L + + Sbjct: 62 DEDTDWIKACARHMPSAKLTKIREILTEWLAQDSPGKIVIFTQFLDFVQILATMCQAENW 121 Query: 89 PQGRTLDKDPCTIQEWN-------EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDL 141 P K ++E N + + ++ A + G GL+L N + LWW+ Sbjct: 122 PYVLLTGKLSLAVRENNMTLFSDKDSEKRIMIASLKAGGTGLDL-SAANKCILVDLWWNE 180 Query: 142 EEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 +Q R+ + G + V LI +N+ID+ +L K+ I Sbjct: 181 AIQEQAFCRLF-----RIGQESEVEFVKLIIENSIDDYLLNLQTHKTAI 224 >gi|156396819|ref|XP_001637590.1| predicted protein [Nematostella vectensis] gi|156224703|gb|EDO45527.1| predicted protein [Nematostella vectensis] Length = 1438 Score = 73.8 bits (180), Expect = 1e-11, Method: Composition-based stats. Identities = 30/153 (19%), Positives = 57/153 (37%), Gaps = 18/153 (11%) Query: 48 WKEVHDEKIKA----LEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD------ 97 K H K++A L I + N+A +V + L + KA + + Sbjct: 1250 VKGSHSTKVEAVVRALLGIRAEDNSAKCLVFSTWQDVLDVIAKALAENDVYFRHITTSRK 1309 Query: 98 -PCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTR 155 P + + + I +L S +GLN+ ++L + Q + R+ Sbjct: 1310 LPEDLHAFKVDPDISVLLLPLQSGSNGLNIIEATHVL-LVEPALNPAHELQALGRV---- 1364 Query: 156 QRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKS 188 + G + VY I Q T++ + L+ K+ Sbjct: 1365 -HRIGQTKPTHVYRFIIQGTVESRMYTLLKGKA 1396 >gi|148228350|ref|NP_001084942.1| transcription termination factor, RNA polymerase II [Xenopus laevis] gi|47122916|gb|AAH70581.1| MGC81081 protein [Xenopus laevis] Length = 1187 Score = 73.8 bits (180), Expect = 1e-11, Method: Composition-based stats. Identities = 26/157 (16%), Positives = 56/157 (35%), Gaps = 18/157 (11%) Query: 53 DEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFP---------QGRTLDKDPCT-IQ 102 + L+ I + A ++ + S L + G K ++ Sbjct: 1018 SSLVSELKTIRSSSEAQKSVIVSQWTSMLKIVAVHLKLIGLSCATIDGSVNPKQRMDMVE 1077 Query: 103 EWNEGKI--PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 ++N ++ + G GLNL G + L + W+ Q +RI + G Sbjct: 1078 DFNNNPKGPQVMLVSLCAGGVGLNLVGGNH-LFLMDMHWNPALEDQACDRI-----YRVG 1131 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 ++ V ++ + T++E + Q K + +L+ Sbjct: 1132 QQKDVVIHRFVCLGTVEEKISQLQEKKKDLAKKVLSG 1168 >gi|170585466|ref|XP_001897504.1| SNF2 family N-terminal domain containing protein [Brugia malayi] gi|158595051|gb|EDP33626.1| SNF2 family N-terminal domain containing protein [Brugia malayi] Length = 1327 Score = 73.8 bits (180), Expect = 1e-11, Method: Composition-based stats. Identities = 32/189 (16%), Positives = 68/189 (35%), Gaps = 46/189 (24%) Query: 53 DEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQKA----------------------- 87 K+ L II+K+ ++V ++ +++ Sbjct: 911 SNKLMLLVEIIKKSEEIGDKLLVFSQSIESISLIKRMLQYMDENGVWFTDGHEAMKAANE 970 Query: 88 ---FPQGR---TLDKDPCTIQE------WNEGKI---PLLFAHPASCGHGLNLQYGGNIL 132 + +GR +D T + +N+ L+ + G N+ N + Sbjct: 971 TWGWKEGRDYMVIDGQVQTSKRHEIQTKFNDPNNLRSRLMLISTRAGSLGTNM-VAANRV 1029 Query: 133 VFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQD 192 V F W+ Q + R+ + G + V++Y IAQ T++E + +R TK + Sbjct: 1030 VIFDACWNPSHDTQSLFRV-----YRFGQTKPVYIYRFIAQGTMEERIYKRQVTKESTSM 1084 Query: 193 LLLNALKKE 201 +++ + E Sbjct: 1085 RVVDEAQIE 1093 >gi|293352708|ref|XP_002728046.1| PREDICTED: zinc finger, RAN-binding domain containing 3 [Rattus norvegicus] Length = 1069 Score = 73.8 bits (180), Expect = 1e-11, Method: Composition-based stats. Identities = 34/167 (20%), Positives = 65/167 (38%), Gaps = 20/167 (11%) Query: 49 KEVHDEKIKALEVIIE---KANAAPIIVAYHFNSDLARLQKAFPQGRTL----------- 94 K+ K A++ I+ + ++ +V H S L +A + + Sbjct: 316 KQTAIAKAGAVKDYIKMLLQNDSLKFLVFAHHLSMLQACTEAVIESKARYIRIDGSVPSS 375 Query: 95 DKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 ++ Q + + + G GL + +VF L+WD +Q +R Sbjct: 376 ERIHLVNQFQKDPDTRVAILSIQAAGQGLTFT-AASHVVFAELFWDPGHIKQAEDR---- 430 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 + G +V ++YLIA T+D L+ L K+ + LN K++ Sbjct: 431 -AHRIGQCSSVNIHYLIANGTLDSLMWAMLNRKAQVTGSTLNGRKEK 476 >gi|168041184|ref|XP_001773072.1| SWI/SNF class chromatin remodeling complex protein [Physcomitrella patens subsp. patens] gi|162675619|gb|EDQ62112.1| SWI/SNF class chromatin remodeling complex protein [Physcomitrella patens subsp. patens] Length = 2529 Score = 73.8 bits (180), Expect = 1e-11, Method: Composition-based stats. Identities = 32/174 (18%), Positives = 61/174 (35%), Gaps = 30/174 (17%) Query: 26 ASKTVKCLQL--ANGAVYYD------EEKHWKEVHDEKIKALEVIIEKAN--AAPIIVAY 75 A KC++L Y + + K+ L+ I+ K + +++ Sbjct: 1494 APLQNKCMELRKVCNHPYLNYPPRYHSQGDMIVRTCGKLWILDRILVKLHKTGHRVLLFS 1553 Query: 76 HFNSDLARLQ----------KAFPQGRTLDKDPCTIQEWNEG--KIPLLFAHPASCGHGL 123 L L+ + TL+ I E+N + + G GL Sbjct: 1554 TMTRLLDILEDYLQWRRLVYRRIDGMTTLEARESAIVEFNRPNSDCFIFLLSIRAAGRGL 1613 Query: 124 NLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYL--IAQNT 175 NLQ + ++ + + + +Q + R + G KR V V Y+ + +NT Sbjct: 1614 NLQT-ADTVIVYDPDPNPKNEEQAVAR-----AHRIGQKREVRVLYMEAVVENT 1661 >gi|124359580|gb|ABN05984.1| HMG-I and HMG-Y, DNA-binding; Bromodomain; Helicase, C-terminal [Medicago truncatula] Length = 1069 Score = 73.8 bits (180), Expect = 1e-11, Method: Composition-based stats. Identities = 30/168 (17%), Positives = 58/168 (34%), Gaps = 28/168 (16%) Query: 27 SKTVKCLQL--------ANGAVYYDEEKHWKEVHDEKIKALEVIIEKAN--AAPIIVAYH 76 + +C++L N + D K + K+ L+ I+ K +++ Sbjct: 131 TLNNRCMELRKTCNHPLLNYPFFSDLSKDFMVKCCGKLWMLDRILIKLQRTGHRVLLFST 190 Query: 77 FNSDLARLQ----------KAFPQGRTLDKDPCTIQEWNEG--KIPLLFAHPASCGHGLN 124 L L+ + L+ I ++N + + G GLN Sbjct: 191 MTKLLDILEEYLQWRRLVYRRIDGTTALEDRESAIVDFNSPNSDCFIFLLSIRAAGRGLN 250 Query: 125 LQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIA 172 LQ + +V + + + +Q + R + G KR V V Y+ A Sbjct: 251 LQ-SADTVVIYDPDPNPKNEEQAVAR-----AHRIGQKREVKVIYMEA 292 >gi|312075594|ref|XP_003140486.1| hypothetical protein LOAG_04901 [Loa loa] gi|307764349|gb|EFO23583.1| hypothetical protein LOAG_04901 [Loa loa] Length = 698 Score = 73.8 bits (180), Expect = 1e-11, Method: Composition-based stats. Identities = 39/196 (19%), Positives = 72/196 (36%), Gaps = 32/196 (16%) Query: 27 SKTVKCLQLANGAVYYDEEKHWKEVHDE-----KIKALEVIIEKAN--AAPIIVAYHFNS 79 + T K L D K +++ ++ K+K L ++ A ++ + S Sbjct: 470 ALTEKLLD-------DDGNKQIEQLFEKNFLSMKLKKLFEHMDYALSCGDKCVIVSQWTS 522 Query: 80 DLARLQKAF---------PQGRTLDKDPCTIQE-WNEGKI--PLLFAHPASCGHGLNLQY 127 L L+ G+ D + +N+ ++ + G Sbjct: 523 LLNILEHHLRRKEILYTSINGKVSSSDRQSRANSFNKIDSGPRVMLLSL-TAGGVGLNLV 581 Query: 128 GGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTK 187 GGN L L W+ QQ +RI + G + VF++ L+ TI+E VL R K Sbjct: 582 GGNHLFLVDLHWNPALEQQACDRI-----YRIGQTKNVFIHKLVCLETIEERVLALQRIK 636 Query: 188 STIQDLLLNALKKETI 203 T+ +L + + + Sbjct: 637 QTLAKDVLEGVASKKL 652 >gi|157870139|ref|XP_001683620.1| helicase-like protein [Leishmania major strain Friedlin] gi|68126686|emb|CAJ04698.1| putative helicase-like protein [Leishmania major strain Friedlin] Length = 1274 Score = 73.8 bits (180), Expect = 1e-11, Method: Composition-based stats. Identities = 33/204 (16%), Positives = 77/204 (37%), Gaps = 15/204 (7%) Query: 9 RELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKAN- 67 EL K + ++L A+ DE+ + + + LE +I K N Sbjct: 781 EELCVPPSLNYTPLLEDGVKLLVAIKLVAAAMARDEKVLLFSLSTQLLTFLEHMIAKVNI 840 Query: 68 --AAPII-VAYHFNSDLAR-LQKAFPQGRT-LDKDPCTIQEWNEGKIP-LLFAHPASCGH 121 P+ + + L+R ++ G + +++++ P L + G Sbjct: 841 EWRRPVAALQRQRHPQLSRPIRYCRLDGSHSAAQRAAMLEDFDRPDGPALFLLSTKAGGV 900 Query: 122 GLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVL 181 G+ + ++ ++ + QQ I R + G R V+VY L+ T++ + Sbjct: 901 GITVT-AATRVILVDTSFNPADDQQAIGR-----AYRYGQTRPVYVYRLMCYPTLEYSIF 954 Query: 182 QRLRTKSTIQDLLLN--ALKKETI 203 + K + ++ ++K++ + Sbjct: 955 VQKLAKEWLFKTVIEESSVKRDGL 978 >gi|221106342|ref|XP_002157301.1| PREDICTED: similar to excision repair cross-complementing rodent repair deficiency complementation group 6, partial [Hydra magnipapillata] Length = 1132 Score = 73.8 bits (180), Expect = 1e-11, Method: Composition-based stats. Identities = 25/138 (18%), Positives = 50/138 (36%), Gaps = 18/138 (13%) Query: 65 KANAAPIIVAYHFNSDLARLQKAFPQGRTL-----------DKDPCTIQEWNEG-KIPLL 112 KA ++ L +QK + L + ++ E + +L Sbjct: 386 KAENHRTVIFSQSIKMLDIIQKVLSELGHLILRVDGRMKNPQDRENVLDKFKEDLRYNVL 445 Query: 113 FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIA 172 G+ L N LV F W+ Q ++R+ + G ++ V VY L+ Sbjct: 446 LMTTQIGSVGITLTC-ANRLVIFDPSWNPGTDAQAVDRV-----YRIGQEKDVVVYRLVT 499 Query: 173 QNTIDELVLQRLRTKSTI 190 +++E + ++ K+ I Sbjct: 500 CGSVEEKIYRKQIFKNAI 517 >gi|242023012|ref|XP_002431930.1| helicase, putative [Pediculus humanus corporis] gi|212517281|gb|EEB19192.1| helicase, putative [Pediculus humanus corporis] Length = 882 Score = 73.8 bits (180), Expect = 1e-11, Method: Composition-based stats. Identities = 37/159 (23%), Positives = 65/159 (40%), Gaps = 20/159 (12%) Query: 53 DEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQKAFPQGRT----------LDKDPCT 100 KIK + ++E+A II+ + L +L+ +T + P Sbjct: 707 STKIKTVVKLVEEALEADDKIIIVSQWAGLLQKLKTHILSLKTGVVTLDGSVPVKFRPKI 766 Query: 101 IQEWNEGK--IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQ 158 I ++N K I ++ + G GGN LV W+ + Q +RI + Sbjct: 767 IDDFNNPKTGIKVMLLSL-TAGGVGLNLVGGNRLVIIEPHWNPQLESQACDRI-----YR 820 Query: 159 AGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 G K+ V+VY +I Q TI+E + + K + + +L Sbjct: 821 VGQKKPVYVYKIICQETIEERIELLQKKKLEVAETVLKG 859 >gi|220931728|ref|YP_002508636.1| helicase domain protein [Halothermothrix orenii H 168] gi|219993038|gb|ACL69641.1| helicase domain protein [Halothermothrix orenii H 168] Length = 467 Score = 73.4 bits (179), Expect = 1e-11, Method: Composition-based stats. Identities = 29/152 (19%), Positives = 64/152 (42%), Gaps = 15/152 (9%) Query: 52 HDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTL-----DKDPCTIQEWNE 106 + KIK +E I++ + I+ + + + + + +EW + Sbjct: 270 TNAKIKEVEKILKGIDGQ-AIIFTEYRATQEFIAHYLEKRGYKTILFNGALSSSGKEWIK 328 Query: 107 G---KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKR 163 + + + GLNLQ+ N+++ + L W+ + +Q I R+ + G + Sbjct: 329 YIFQQKKDVLISTEAGSQGLNLQF-CNVIINYDLPWNPMKIEQRIGRV-----HRLGQTK 382 Query: 164 AVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 V +Y L ++TI+E +L L K + ++ Sbjct: 383 DVLIYNLATKDTIEEKILNLLYNKINLFKEII 414 >gi|212530198|ref|XP_002145256.1| SNF2 family helicase/ATPase, putative [Penicillium marneffei ATCC 18224] gi|210074654|gb|EEA28741.1| SNF2 family helicase/ATPase, putative [Penicillium marneffei ATCC 18224] Length = 1117 Score = 73.4 bits (179), Expect = 2e-11, Method: Composition-based stats. Identities = 27/155 (17%), Positives = 55/155 (35%), Gaps = 18/155 (11%) Query: 63 IEKANAAPIIVAYHFNSDLARLQKAFPQGR-----------TLDKDPCTIQEWNEGK-IP 110 I++ +V + S L ++ A TL + + E I Sbjct: 956 IKEGPPIKSVVFSAWTSHLDLIEIALKDNGLDGFTRIDGTMTLAARKTALNNFAEDDSIT 1015 Query: 111 LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYL 170 +L A + G GLNL + + ++ Q ++R+ + G R V Sbjct: 1016 ILLATIGAGGVGLNLTSASRVYIM-EPQYNPAAVAQAVDRV-----HRLGQTREVTTVQF 1069 Query: 171 IAQNTIDELVLQRLRTKSTIQDLLLNALKKETIHV 205 I + +I+E + + + K + + + K + V Sbjct: 1070 IMKASIEEKIFEMAKKKQQLAEDSMARGKLDKREV 1104 >gi|261329633|emb|CBH12615.1| SNF2 DNA repair protein, putative [Trypanosoma brucei gambiense DAL972] Length = 1077 Score = 73.4 bits (179), Expect = 2e-11, Method: Composition-based stats. Identities = 26/164 (15%), Positives = 55/164 (33%), Gaps = 20/164 (12%) Query: 53 DEKIKALEVIIEKANAA--PIIVAYHFNSDLARLQKAFPQGRT----------LDKDPCT 100 K+ AL I+ ++ + + + + + Sbjct: 869 SGKLTALISILHSIFEKMEKAVIFSQYIGSQDFIARTLTAYKISVVTIRGKDCQQRRRRV 928 Query: 101 IQEWNEGKIPL-LFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQA 159 ++ + + K L L +GL+L +++++ WW+ + Q I R + Sbjct: 929 VEMFRDDKNVLCLVVSTQIGAYGLDLTAANHVILW-DTWWNPQVESQAIARC-----YRQ 982 Query: 160 GFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETI 203 +AV Y L A D VL+ K + L+N + + Sbjct: 983 NQSKAVIAYKL-ASGFEDATVLKAQARKRALFKCLINEETSQVV 1025 >gi|72391588|ref|XP_846088.1| SNF2 DNA repair protein [Trypanosoma brucei TREU927] gi|74997988|sp|Q57X81|JBP2_TRYBB RecName: Full=Bifunctional helicase and thymine dioxygenase JBP2; AltName: Full=J-binding protein 2; Short=TbJBP2; Includes: RecName: Full=Probable DNA helicase JBP2; Includes: RecName: Full=Thymine dioxygenase JBP2 gi|62175656|gb|AAX69788.1| SNF2 DNA repair protein, putative [Trypanosoma brucei] gi|70802624|gb|AAZ12529.1| SNF2 DNA repair protein, putative [Trypanosoma brucei brucei strain 927/4 GUTat10.1] Length = 1077 Score = 73.4 bits (179), Expect = 2e-11, Method: Composition-based stats. Identities = 26/164 (15%), Positives = 55/164 (33%), Gaps = 20/164 (12%) Query: 53 DEKIKALEVIIEKANAA--PIIVAYHFNSDLARLQKAFPQGRT----------LDKDPCT 100 K+ AL I+ ++ + + + + + Sbjct: 869 SGKLTALISILHSIFEKMEKAVIFSQYIGSQDFIARTLTAYKISVVTIRGKDCQQRRRRV 928 Query: 101 IQEWNEGKIPL-LFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQA 159 ++ + + K L L +GL+L +++++ WW+ + Q I R + Sbjct: 929 VEMFRDDKNVLCLVVSTQIGAYGLDLTAANHVILW-DTWWNPQVESQAIARC-----YRQ 982 Query: 160 GFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETI 203 +AV Y L A D VL+ K + L+N + + Sbjct: 983 NQSKAVIAYKL-ASGFEDATVLKAQARKRALFKCLINEETSQVV 1025 >gi|226311883|ref|YP_002771777.1| hypothetical protein BBR47_22960 [Brevibacillus brevis NBRC 100599] gi|226094831|dbj|BAH43273.1| conserved hypothetical protein [Brevibacillus brevis NBRC 100599] Length = 568 Score = 73.4 bits (179), Expect = 2e-11, Method: Composition-based stats. Identities = 30/146 (20%), Positives = 62/146 (42%), Gaps = 21/146 (14%) Query: 61 VIIEKANAAPIIVAYHFNSDLARLQKAFPQ-----GRTLDKDPCTIQEW------NEGKI 109 +I++ N +I+ + + LQK + ++W N ++ Sbjct: 371 ELIQQINDK-VIIFTEYRATQNYLQKYLHDHGITSVPFRGGFKRSKKDWMTDLFQNRAQV 429 Query: 110 PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYY 169 + G G+NLQ+ N ++ + + W+ +Q I R+ + G KR V +Y Sbjct: 430 ---LIATEAGGEGINLQF-CNQVINYDMPWNPMRVEQRIGRV-----HRLGQKRDVHIYN 480 Query: 170 LIAQNTIDELVLQRLRTKSTIQDLLL 195 L TI+E +L+ L K + ++++ Sbjct: 481 LSTTGTIEEHILKLLYEKIDLFEMVI 506 >gi|293341309|ref|XP_002724934.1| PREDICTED: zinc finger, RAN-binding domain containing 3-like [Rattus norvegicus] Length = 1037 Score = 73.4 bits (179), Expect = 2e-11, Method: Composition-based stats. Identities = 34/167 (20%), Positives = 65/167 (38%), Gaps = 20/167 (11%) Query: 49 KEVHDEKIKALEVIIE---KANAAPIIVAYHFNSDLARLQKAFPQGRTL----------- 94 K+ K A++ I+ + ++ +V H S L +A + + Sbjct: 316 KQTAIAKAGAVKDYIKMLLQNDSLKFLVFAHHLSMLQACTEAVIESKARYIRIDGSVPSS 375 Query: 95 DKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 ++ Q + + + G GL + +VF L+WD +Q +R Sbjct: 376 ERIHLVNQFQKDPDTRVAILSIQAAGQGLTFT-AASHVVFAELFWDPGHIKQAEDR---- 430 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 + G +V ++YLIA T+D L+ L K+ + LN K++ Sbjct: 431 -AHRIGQCSSVNIHYLIANGTLDSLMWAMLNRKAQVTGSTLNGRKEK 476 >gi|289650008|ref|ZP_06481351.1| SNF2-related:helicase, C-terminal [Pseudomonas syringae pv. aesculi str. 2250] Length = 650 Score = 73.4 bits (179), Expect = 2e-11, Method: Composition-based stats. Identities = 28/154 (18%), Positives = 58/154 (37%), Gaps = 18/154 (11%) Query: 55 KIKALEVIIEKAN-AAPIIVAYHFNSDLARLQKAFPQGRT----------LDKDPCTIQE 103 K++ + ++ + + +I+ + +A L++ + K I Sbjct: 488 KVRIVADLMAELDVDDKVILFCEYQESVATLREHCLKMGIGCVTLVGSDSPKKRQKAIDA 547 Query: 104 WN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFK 162 + + + ++ G G NL N + F L W Q +R + G Sbjct: 548 FQQDPDCRVFIGTRSAAGTGYNLT-AANYVFFLGLPWTPGLQDQAEDR-----AYRNGQL 601 Query: 163 RAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 R V V +A++TID+ + Q L K + L++ Sbjct: 602 RMVVVKIPLAEDTIDQQLWQMLMDKRALASDLID 635 >gi|162448815|ref|YP_001611182.1| helicase, putative [Sorangium cellulosum 'So ce 56'] gi|161159397|emb|CAN90702.1| helicase, putative [Sorangium cellulosum 'So ce 56'] Length = 420 Score = 73.4 bits (179), Expect = 2e-11, Method: Composition-based stats. Identities = 29/139 (20%), Positives = 56/139 (40%), Gaps = 18/139 (12%) Query: 52 HDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLD----------KDPCTI 101 K AL ++ +A+ ++V F L+ ++ A + + Sbjct: 207 ASRKGGALVDLV-RAHDEQVLVFTRFRDTLSTIEAALREAGVEPVAFHGGLSAADKRAAL 265 Query: 102 QEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGF 161 + +G+ + + G G NL + ++LV F L ++ +Q I R+ + G Sbjct: 266 SAFRDGRARV-LVSTDAGGEGHNLHH-CHVLVNFDLPYNPMLIEQRIGRL-----HRMGQ 318 Query: 162 KRAVFVYYLIAQNTIDELV 180 + V VY L A+ T +E V Sbjct: 319 REEVRVYNLCARGTAEERV 337 >gi|84498682|ref|ZP_00997435.1| ATP-dependent RNA helicase [Janibacter sp. HTCC2649] gi|84381019|gb|EAP96906.1| ATP-dependent RNA helicase [Janibacter sp. HTCC2649] Length = 721 Score = 73.4 bits (179), Expect = 2e-11, Method: Composition-based stats. Identities = 26/107 (24%), Positives = 46/107 (42%), Gaps = 7/107 (6%) Query: 92 RTLDKDPCTIQEW-NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 +T I+ + + +I ++ + G GLNLQ N +V L W E Q I+R Sbjct: 582 QTPKVRKANIEAFLTDPEISVVVCSLTAAGVGLNLQVASN-VVLAELSWTSAEQTQAIDR 640 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + + G V + +IA TID + + + K+ + L+ Sbjct: 641 V-----HRIGQTEPVTAWRIIAAQTIDSRLAELIDDKAGLAARALDG 682 >gi|68064412|ref|XP_674191.1| DNA helicase [Plasmodium berghei strain ANKA] gi|56492586|emb|CAI00653.1| DNA helicase, putative [Plasmodium berghei] Length = 467 Score = 73.4 bits (179), Expect = 2e-11, Method: Composition-based stats. Identities = 37/236 (15%), Positives = 78/236 (33%), Gaps = 47/236 (19%) Query: 3 QYHKFQRELYCDL-QGENIEAFNSASKTVKCLQLANG---AVYYDEEKHWKEVHDEKIKA 58 Y + + + + + + + + ++ ++ N Y + + K + Sbjct: 145 LYKQIENKSFKQVNSDGTLNTKSFQNTIMQLRKVVNHPFLFTYNYDINDFIIKSSGKFEV 204 Query: 59 LEVIIEKA--NAAPIIVAYHFN------SDLARLQK----AFPQGRTLDKDPCTIQEWNE 106 L+ +I K I++ SD L+ +L I +NE Sbjct: 205 LDRMIPKLLKFKHKILLFCQMTKLMDILSDYFELRGYKYHRLDGSVSLSNRREIIDNFNE 264 Query: 107 -------------------------GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDL 141 + + S GLNLQ + ++ F ++ Sbjct: 265 SMFVNNSEEIFKNKDSDLLTQESKLDEPMIFILSTRSGSLGLNLQ-AADTVIIFDSDFNP 323 Query: 142 EEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + Q + R + G K V V+ I ++++ELV Q+ + K I D ++ A Sbjct: 324 HQDIQAMCRC-----HRIGQKNIVKVFRFITISSVEELVFQKAKDKLNINDKVIQA 374 >gi|307203054|gb|EFN82245.1| Transcriptional regulator ATRX-like protein [Harpegnathos saltator] Length = 2019 Score = 73.4 bits (179), Expect = 2e-11, Method: Composition-based stats. Identities = 22/86 (25%), Positives = 39/86 (45%), Gaps = 6/86 (6%) Query: 111 LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYL 170 L + G G+NL N ++ F W+ Q I RI + G K+ +VY Sbjct: 1738 LFLISTRAGGLGINLT-AANRVIIFDASWNPSHDVQSIFRI-----YRFGQKKPCYVYRF 1791 Query: 171 IAQNTIDELVLQRLRTKSTIQDLLLN 196 +A T++E + R TK ++ +++ Sbjct: 1792 LAAKTMEEKIYNRQVTKLSLSCRVVD 1817 >gi|260666103|gb|ACX47901.1| Dbuz/Dlh [Drosophila buzzatii] Length = 517 Score = 73.4 bits (179), Expect = 2e-11, Method: Composition-based stats. Identities = 37/159 (23%), Positives = 56/159 (35%), Gaps = 26/159 (16%) Query: 51 VHDEKIKALEVIIEK---ANAAPIIVAYHFNSDLARLQKAFPQGRTLD------------ 95 KI II + IIV + L L K + T Sbjct: 343 TPSTKISRAIEIINEHVLLEKKKIIVVSQSVALLEILNKHLYKDSTRQLKIMTLTGRTPQ 402 Query: 96 -KDPCTIQEWNEGKIP-LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ-MIERIG 152 K I ++NE P +L GLNL G L+F L W+ Q I R+G Sbjct: 403 HKIGELISDFNESVKPCILLISLKLAETGLNL-NGAKYLLFMDLHWNPHLEPQSAIHRLG 461 Query: 153 VTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQ 191 V V+ + ++T+D+ + Q +TK ++ Sbjct: 462 -------QQNENVIVFQFVCKDTVDDHIQQVQQTKLSLA 493 >gi|118372610|ref|XP_001019500.1| SNF2 family N-terminal domain containing protein [Tetrahymena thermophila] gi|89301267|gb|EAR99255.1| SNF2 family N-terminal domain containing protein [Tetrahymena thermophila SB210] Length = 731 Score = 73.4 bits (179), Expect = 2e-11, Method: Composition-based stats. Identities = 31/155 (20%), Positives = 61/155 (39%), Gaps = 19/155 (12%) Query: 54 EKIKALEVIIEKANAAPIIVAYHFNSDLARLQKA---------FPQGRTLDKDPCT-IQE 103 + + LE +++ + +IV L ++K G D++ +Q Sbjct: 425 QVLNYLEELLKSVD--KVIVFAEHIQILDNIEKFANDRKKKYIRIDGSVRDEEKSIRVQS 482 Query: 104 W-NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFK 162 + N I + + G+ L NIL F + W +Q +R + G K Sbjct: 483 FENNKNISIAILSFGAASLGITLTSASNIL-FAEMHWTPAIMEQAEDR-----AHRIGQK 536 Query: 163 RAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 V +YLI + T+D ++ +++ K I +L+ Sbjct: 537 NPVTCHYLIGEGTLDNMLYKKILEKQQIVGAILDG 571 >gi|296128669|ref|YP_003635919.1| helicase domain protein [Cellulomonas flavigena DSM 20109] gi|296020484|gb|ADG73720.1| helicase domain protein [Cellulomonas flavigena DSM 20109] Length = 737 Score = 73.4 bits (179), Expect = 2e-11, Method: Composition-based stats. Identities = 27/111 (24%), Positives = 49/111 (44%), Gaps = 7/111 (6%) Query: 92 RTLDKDPCTIQEW-NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 +T + + + ++ ++ + G GLNLQ N LV L W E Q I+R Sbjct: 585 QTPRARAKAVAAFTEDPEVQIVVCSLMAAGVGLNLQVASN-LVLAELSWTDAEQTQAIDR 643 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 I + G + V + +IA TID + + + +KS + L+ ++ Sbjct: 644 I-----HRIGQEEPVTAWRVIAAQTIDARIAELIDSKSGLAARALDGASED 689 >gi|66519055|ref|XP_393754.2| PREDICTED: transcription termination factor 2 [Apis mellifera] Length = 954 Score = 73.4 bits (179), Expect = 2e-11, Method: Composition-based stats. Identities = 33/161 (20%), Positives = 64/161 (39%), Gaps = 21/161 (13%) Query: 56 IKALEVIIEKANAAPIIVAYHFNSDLARLQ-----------KAFPQGRTLDKDPCTIQEW 104 ++ ++ I+EK + +I+ + S L + F + + + + Sbjct: 788 LEKVKEILEKND--KLIIVSQWTSTLNIIASCLSSIKDASFDMFTGSVPIKERQGIMDSF 845 Query: 105 N--EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFK 162 N K +L + G GGN L+ + W+ + Q +RI + G K Sbjct: 846 NTSNNKPKILLLSL-TAGGVGLNLVGGNHLLLIDIHWNPQLEVQAQDRI-----YRFGQK 899 Query: 163 RAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETI 203 + VF+Y I ++TI+E + K I +L+ K T+ Sbjct: 900 KNVFIYKFICKDTIEERIKHLQERKMEIAQNVLSGDKNSTV 940 >gi|290988684|ref|XP_002677026.1| predicted protein [Naegleria gruberi] gi|284090631|gb|EFC44282.1| predicted protein [Naegleria gruberi] Length = 822 Score = 73.4 bits (179), Expect = 2e-11, Method: Composition-based stats. Identities = 34/168 (20%), Positives = 68/168 (40%), Gaps = 20/168 (11%) Query: 45 EKHWKEVHDEKIKALEVIIEK---ANAAPIIVAYHFNSDLARLQKAFPQGRTLD------ 95 E H K ++K L+ ++ + ++V + + K + T+ Sbjct: 595 ESHPKLTGSTRVKILKNLVSRIVGGKKEKVVVFSGLVCYNSVIVKELSKDNTIKIGVFTG 654 Query: 96 -----KDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 K I ++N G I L + G G++L N +V F+L ++ + Q I R Sbjct: 655 DTSSPKRAEIINQFNRGIINTLLISKNAGGVGIDLTTATN-VVLFNLDFNFAKDDQAICR 713 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNAL 198 + + K V ++ L+ + ++D V + K+ I D LL+ + Sbjct: 714 LV-----RKNQKEQVKIFRLVCRESVDVAVKELQAHKTVIFDKLLDDI 756 >gi|15230098|ref|NP_189077.1| chr40 (chromatin remodeling 40); ATP binding / DNA binding / helicase/ nucleic acid binding [Arabidopsis thaliana] gi|11994696|dbj|BAB02934.1| unnamed protein product [Arabidopsis thaliana] Length = 1132 Score = 73.4 bits (179), Expect = 2e-11, Method: Composition-based stats. Identities = 33/162 (20%), Positives = 63/162 (38%), Gaps = 25/162 (15%) Query: 55 KIKALEVIIEKAN--AAPIIVAYHFNSDLARLQKAFP--------------QGRTLDKDP 98 K K L I + ++V + L + + G+ +D Sbjct: 928 KTKFLIDFIRISGTVKEKVLVYSQYIDTLKLIMEQLIAECDWTEGEQILLMHGKVEQRDR 987 Query: 99 C-TIQEWNEGKI--PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTR 155 I +N+ +L A +C G++L G + +V + W+ Q I R Sbjct: 988 QHMIDNFNKPDSGSKVLLASTKACSEGISL-VGASRVVILDVVWNPSVESQAISR----- 1041 Query: 156 QRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + G KRAVF+Y+L+ ++T + + K I +L+ ++ Sbjct: 1042 AFRIGQKRAVFIYHLMVKDTSEWNKYCKQSEKHRISELVFSS 1083 >gi|67465792|ref|XP_649054.1| helicase [Entamoeba histolytica HM-1:IMSS] gi|56465406|gb|EAL43665.1| helicase, putative [Entamoeba histolytica HM-1:IMSS] Length = 837 Score = 73.4 bits (179), Expect = 2e-11, Method: Composition-based stats. Identities = 27/137 (19%), Positives = 48/137 (35%), Gaps = 19/137 (13%) Query: 62 IIEKANAAPIIVAYHFNSDLARLQKAFPQGRTL----DKDPCT------IQEWNE-GKIP 110 + EK N +++ + L + L D D ++ +N Sbjct: 464 MCEKTNEK-VLLFSQYQRTLDSIADLLQSKDILFLRIDGDLDDGLRKERLRRFNHMSSWG 522 Query: 111 LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYL 170 +L GLN+ G + +V F W I V R + G K+ V Y + Sbjct: 523 VLLMTIRVGACGLNIT-GASRVVIFDEGWS------TIGNQAVDRAYRIGQKKDVVSYRI 575 Query: 171 IAQNTIDELVLQRLRTK 187 + T++E + +R K Sbjct: 576 VTCGTLEEKMYRRQVHK 592 >gi|311272141|ref|XP_003133319.1| PREDICTED: LOW QUALITY PROTEIN: zinc finger Ran-binding domain-containing protein 3-like [Sus scrofa] Length = 1044 Score = 73.4 bits (179), Expect = 2e-11, Method: Composition-based stats. Identities = 36/180 (20%), Positives = 71/180 (39%), Gaps = 20/180 (11%) Query: 36 ANGAVYYDEEKHWKEVHDEKIKALEVIIE---KANAAPIIVAYHFNSDLARLQKAFPQGR 92 A ++ + +K+ K A+ I+ + ++ +V H S L +A + + Sbjct: 293 ATESIMGLITRMFKQTAIAKAGAVRDYIKMMLQNDSLKFLVFAHHLSMLQACTEAVIESK 352 Query: 93 TL-----------DKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDL 141 T ++ Q + + + + G GL + +VF L+WD Sbjct: 353 TRYVRIDGSVPSSERIHLVNQFQKDPETRVAILSIQAAGQGLTFTAATH-VVFAELYWDP 411 Query: 142 EEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 +Q +R + G +V ++YLIA T+D L+ L K+ + LN K++ Sbjct: 412 GHIKQAEDR-----AHRIGQCSSVNIHYLIANGTLDTLMWAMLNRKAQVTGSTLNGRKEK 466 >gi|322505021|emb|CAM42238.2| putative DNA helicase [Leishmania braziliensis MHOM/BR/75/M2904] Length = 1096 Score = 73.4 bits (179), Expect = 2e-11, Method: Composition-based stats. Identities = 40/219 (18%), Positives = 77/219 (35%), Gaps = 30/219 (13%) Query: 2 KQYHKFQRELYC---DLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKA 58 K+ ++++ L + A NSA V A + + KI A Sbjct: 407 KEKKALEKQIIALRHSLSSTSTAAANSAFSLVDNSAGDCAARAPNVFEMKMATARAKIPA 466 Query: 59 LEV----IIEKA--NAAPIIVAYHFNSDLARLQKAFPQGRTLD---------------KD 97 ++ I+E+ + +I+ H + L+ A + L ++ Sbjct: 467 VQDYVSGIVEQHLHSGEKLILFAHHQCMMEALRSAVEAVQPLKPIDYIYISGDTPPAQRE 526 Query: 98 PCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 P E + S G G N + +VF L W+ H Q +R+ Sbjct: 527 PAAEHFRTEATCTVAILSMQSSGTGHNFTC-ASTVVFTELDWNPSTHLQCEDRV-----H 580 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + G + + YL+A+ T D ++ L+ K ++ +L Sbjct: 581 RIGQAQPCRIKYLLAEGTSDSVIWPLLQAKLSVTTAMLE 619 >gi|238602372|ref|XP_002395662.1| hypothetical protein MPER_04252 [Moniliophthora perniciosa FA553] gi|215466782|gb|EEB96592.1| hypothetical protein MPER_04252 [Moniliophthora perniciosa FA553] Length = 167 Score = 73.4 bits (179), Expect = 2e-11, Method: Composition-based stats. Identities = 27/139 (19%), Positives = 51/139 (36%), Gaps = 17/139 (12%) Query: 70 PIIVAYHFNSDLARLQKAFPQGRTL-----------DKDPCTIQEWNEGKIPLLFAHPAS 118 +V + + L +++ A D+ T ++ +L + Sbjct: 15 KTVVFSQWTTMLDKVEDALEVAGIRYARLDGTMKRDDRTRATEALKHDPGREVLVVTLRA 74 Query: 119 CGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDE 178 G GLNL + V +W+ Q + RI + G R V LI Q I++ Sbjct: 75 GGVGLNLNVDQRVYVM-DPYWNPAVENQAVARIL-----RLGQTRPVTTVKLITQGAIED 128 Query: 179 LVLQRLRTKSTIQDLLLNA 197 +L+ + K+ + +L L Sbjct: 129 RILEVQKMKTELANLTLGG 147 >gi|154338209|ref|XP_001565329.1| DNA helicase [Leishmania braziliensis MHOM/BR/75/M2904] Length = 1096 Score = 73.4 bits (179), Expect = 2e-11, Method: Composition-based stats. Identities = 40/219 (18%), Positives = 77/219 (35%), Gaps = 30/219 (13%) Query: 2 KQYHKFQRELYC---DLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKA 58 K+ ++++ L + A NSA V A + + KI A Sbjct: 407 KEKKALEKQIIALRHSLSSTSTAAANSAFSLVDNSAGDCAARAPNVFEMKMATARAKIPA 466 Query: 59 LEV----IIEKA--NAAPIIVAYHFNSDLARLQKAFPQGRTLD---------------KD 97 ++ I+E+ + +I+ H + L+ A + L ++ Sbjct: 467 VQDYVSGIVEQHLHSGEKLILFAHHQCMMEALRSAVEAVQPLKPIDYIYISGDTPPAQRE 526 Query: 98 PCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 P E + S G G N + +VF L W+ H Q +R+ Sbjct: 527 PAAEHFRTEATCTVAILSMQSSGTGHNFTC-ASTVVFTELDWNPSTHLQCEDRV-----H 580 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + G + + YL+A+ T D ++ L+ K ++ +L Sbjct: 581 RIGQAQPCRIKYLLAEGTSDSVIWPLLQAKLSVTTAMLE 619 >gi|124430705|ref|NP_081954.1| zinc finger Ran-binding domain-containing protein 3 [Mus musculus] gi|81885066|sp|Q6NZP1|ZRAB3_MOUSE RecName: Full=Zinc finger Ran-binding domain-containing protein 3 gi|42406402|gb|AAH66035.1| Zinc finger, RAN-binding domain containing 3 [Mus musculus] Length = 1069 Score = 73.4 bits (179), Expect = 2e-11, Method: Composition-based stats. Identities = 42/215 (19%), Positives = 87/215 (40%), Gaps = 25/215 (11%) Query: 6 KFQRELYCDLQGENIEAFNSA-SKTVKCLQLAN-GAVYYDEE---KHWKEVHDEKIKALE 60 K ++ + DL ++ N++ + K ++ N GA+ + +K+ K A++ Sbjct: 268 KVRQRIPFDLPPAAVKELNASFEEWQKLMRAPNSGAMETVMGLITRMFKQTAIAKAGAVK 327 Query: 61 VIIE---KANAAPIIVAYHFNSDLARLQKAFPQGRTL-----------DKDPCTIQEWNE 106 I+ + ++ +V H S L +A + ++ ++ Q + Sbjct: 328 DYIKMLLQNDSLKFLVFAHHLSMLQACTEAVIESKSRYIRIDGSVPSSERIHLVNQFQKD 387 Query: 107 GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVF 166 + + G GL + +VF L+WD +Q +R + G +V Sbjct: 388 PDTRVAILSIQAAGQGLTFT-AASHVVFAELYWDPGHIKQAEDR-----AHRIGQCSSVN 441 Query: 167 VYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 ++YLIA T+D L+ L K+ + LN K++ Sbjct: 442 IHYLIANGTLDSLMWAMLNRKAQVTGSTLNGRKEK 476 >gi|148707810|gb|EDL39757.1| mCG13937, isoform CRA_a [Mus musculus] Length = 1073 Score = 73.4 bits (179), Expect = 2e-11, Method: Composition-based stats. Identities = 34/167 (20%), Positives = 66/167 (39%), Gaps = 20/167 (11%) Query: 49 KEVHDEKIKALEVIIE---KANAAPIIVAYHFNSDLARLQKAFPQGRTL----------- 94 K+ K A++ I+ + ++ +V H S L +A + ++ Sbjct: 320 KQTAIAKAGAVKDYIKMLLQNDSLKFLVFAHHLSMLQACTEAVIESKSRYIRIDGSVPSS 379 Query: 95 DKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 ++ Q + + + G GL + +VF L+WD +Q +R Sbjct: 380 ERIHLVNQFQKDPDTRVAILSIQAAGQGLTFT-AASHVVFAELYWDPGHIKQAEDR---- 434 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 + G +V ++YLIA T+D L+ L K+ + LN K++ Sbjct: 435 -AHRIGQCSSVNIHYLIANGTLDSLMWAMLNRKAQVTGSTLNGRKEK 480 >gi|311069060|ref|YP_003973983.1| putative RNA polymerase-associated helicase protein [Bacillus atrophaeus 1942] gi|310869577|gb|ADP33052.1| putative RNA polymerase-associated helicase protein [Bacillus atrophaeus 1942] Length = 556 Score = 73.4 bits (179), Expect = 2e-11, Method: Composition-based stats. Identities = 33/161 (20%), Positives = 72/161 (44%), Gaps = 17/161 (10%) Query: 44 EEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQ---------GRTL 94 ++ + + K + +I+K + +I+ + + LQ Q G Sbjct: 349 MDRINEVTQNSKAIQVVDLIKKIDDK-VIIFTEYRATQIYLQWFLQQNGISSVPFRGGFK 407 Query: 95 DKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 +++ GK+ +L A + G G+NLQ+ N ++ + L W+ +Q I RI Sbjct: 408 RGKKDWMKDLFRGKVQVLIA-TEAGGEGINLQF-CNNIINYDLPWNPMRLEQRIGRI--- 462 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 + G +R V +Y + ++T++E +L+ L K + + ++ Sbjct: 463 --HRLGQERDVHIYNMATKHTVEEHILKLLYEKIHLFEKVV 501 >gi|109730809|gb|AAI17923.1| Zinc finger, RAN-binding domain containing 3 [Mus musculus] gi|109731403|gb|AAI17922.1| Zranb3 protein [Mus musculus] Length = 1069 Score = 73.4 bits (179), Expect = 2e-11, Method: Composition-based stats. Identities = 34/167 (20%), Positives = 66/167 (39%), Gaps = 20/167 (11%) Query: 49 KEVHDEKIKALEVIIE---KANAAPIIVAYHFNSDLARLQKAFPQGRTL----------- 94 K+ K A++ I+ + ++ +V H S L +A + ++ Sbjct: 316 KQTAIAKAGAVKDYIKMLLQNDSLKFLVFAHHLSMLQACTEAVIESKSRYIRIDGSVPSS 375 Query: 95 DKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 ++ Q + + + G GL + +VF L+WD +Q +R Sbjct: 376 ERIHLVNQFQKDPDTRVAILSIQAAGQGLTFT-AASHVVFAELYWDPGHIKQAEDR---- 430 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 + G +V ++YLIA T+D L+ L K+ + LN K++ Sbjct: 431 -AHRIGQCSSVNIHYLIANGTLDSLMWAMLNRKAQVTGSTLNGRKEK 476 >gi|25013144|gb|AAN71685.1| SD19050p [Drosophila melanogaster] Length = 1285 Score = 73.4 bits (179), Expect = 2e-11, Method: Composition-based stats. Identities = 35/175 (20%), Positives = 69/175 (39%), Gaps = 24/175 (13%) Query: 44 EEKHWKEVHDEKIKALEVIIEKANAA----PIIVAYHFNSDLARLQKAFPQGRTLDKDPC 99 K KI ++ ++ K IIV + + L + +A ++ C Sbjct: 1110 AHKSIIGDFSTKISSVVELVLKIKGENEQEKIIVFSQWQAILIEIARALSLNGIQFRNKC 1169 Query: 100 TIQEWNEGKIPL-----LFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 T +++++ K PL L + GLNL + + + + +Q I RI Sbjct: 1170 TNKDFDDFKNPLSNVTCLLMPLSKGSKGLNLIEATH-VFLVEPILNPGDERQAIGRI--- 1225 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKS---------TIQDLLLNALKK 200 + G KR V+ I T++E +L + + ++++ L++LKK Sbjct: 1226 --HRFGQKRPTKVHRFIVNGTVEENILSLITSADDTTTLSTHWDLENMTLDSLKK 1278 >gi|229163175|ref|ZP_04291130.1| Uncharacterized ATP-dependent helicase yqhH [Bacillus cereus R309803] gi|228620238|gb|EEK77109.1| Uncharacterized ATP-dependent helicase yqhH [Bacillus cereus R309803] Length = 560 Score = 73.4 bits (179), Expect = 2e-11, Method: Composition-based stats. Identities = 30/163 (18%), Positives = 65/163 (39%), Gaps = 21/163 (12%) Query: 44 EEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQ-----GRTLDKDP 98 +K + K +I++ N +++ + + LQ Q Sbjct: 349 MDKINHIPFNSKATKALELIQEINDK-VVIFTEYRASQMYLQWFLQQHGISSVPFRGGFK 407 Query: 99 CTIQEW------NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIG 152 ++W N ++ + G G+NLQ+ + ++ + L W+ +Q I RI Sbjct: 408 RGKKDWMKELFQNRAQV---LIATEAGGEGINLQF-CSHMINYDLPWNPMRLEQRIGRI- 462 Query: 153 VTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 + G K V +Y L ++T++E +L+ L K + + ++ Sbjct: 463 ----HRLGQKNDVHIYNLATKHTVEEHILKLLYEKINLFERVI 501 >gi|242214471|ref|XP_002473058.1| predicted protein [Postia placenta Mad-698-R] gi|220727888|gb|EED81795.1| predicted protein [Postia placenta Mad-698-R] Length = 67 Score = 73.4 bits (179), Expect = 2e-11, Method: Composition-based stats. Identities = 20/69 (28%), Positives = 34/69 (49%), Gaps = 6/69 (8%) Query: 119 CGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDE 178 G G+NL + ++ F W+ + Q I R + G + V VY LI Q ++++ Sbjct: 1 GGLGINLTR-ASTVIMFDSDWNPQNDMQAIAR-----AHRIGQTKVVKVYRLICQGSVED 54 Query: 179 LVLQRLRTK 187 +L R+R K Sbjct: 55 QMLDRIRRK 63 >gi|170085497|ref|XP_001873972.1| SNF2 family DNA-dependent ATPase [Laccaria bicolor S238N-H82] gi|164651524|gb|EDR15764.1| SNF2 family DNA-dependent ATPase [Laccaria bicolor S238N-H82] Length = 1754 Score = 73.4 bits (179), Expect = 2e-11, Method: Composition-based stats. Identities = 27/160 (16%), Positives = 63/160 (39%), Gaps = 23/160 (14%) Query: 53 DEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAF---------PQGRTLDKDPC-T 100 K++ L+ ++ K A +++ F L ++ G T + Sbjct: 1179 SAKLRFLKALLPKLKARGHRVLLFSQFVIALNVIEDFLQGEGYKFLRLDGDTKGSERQKG 1238 Query: 101 IQEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQ 158 + E+N + + G G+NL Y + ++ F ++ Q I R + Sbjct: 1239 MDEFNRPGSDYFVYLLTTRAGGVGINL-YTADTVIIFDPDFNP---HQAIAR-----AYR 1289 Query: 159 AGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNAL 198 G K+ V+ L+ +++ +E ++Q + K + L++ + Sbjct: 1290 YGQKKTCLVFKLMVKDSAEERIMQIGKKKLVLDHLIVQKM 1329 >gi|75758379|ref|ZP_00738502.1| Superfamily II DNA/RNA helicases, SNF2 family [Bacillus thuringiensis serovar israelensis ATCC 35646] gi|228904786|ref|ZP_04068840.1| Superfamily II DNA/RNA helicase, SNF2 [Bacillus thuringiensis IBL 4222] gi|74494105|gb|EAO57198.1| Superfamily II DNA/RNA helicases, SNF2 family [Bacillus thuringiensis serovar israelensis ATCC 35646] gi|228854800|gb|EEM99404.1| Superfamily II DNA/RNA helicase, SNF2 [Bacillus thuringiensis IBL 4222] Length = 595 Score = 73.4 bits (179), Expect = 2e-11, Method: Composition-based stats. Identities = 33/191 (17%), Positives = 70/191 (36%), Gaps = 20/191 (10%) Query: 25 SASKTVKCLQLA-NGAVYYDEEKHWKEVHDEKIKALEVIIEK---ANAAPIIVAYHFNSD 80 ++S LQ+ +G + E + V K+ L I ++ A I++ F Sbjct: 391 ASSDHPALLQMGQSGMSKHYLEHIPENVKSPKLTELVDICKERIEAGINKIVIFTQFAKM 450 Query: 81 LARLQKAFP---QGRTLD------KDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNI 131 + + + L+ + ++ + F + +GLN+Q+ N Sbjct: 451 QTLIDEELSTLGKVALLNGSMSSAQRQEQLETFKADPEYKFFVLTDAGNYGLNIQF-ANT 509 Query: 132 LVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVF-VYYLIAQNTIDELVLQRLRTKSTI 190 L+ + W+ +Q R+ + G V + L+ TIDE + + L K + Sbjct: 510 LINYDSPWNPATFEQRAGRV-----HRIGSTHNVVDIISLVTMGTIDEKIQETLEEKRKL 564 Query: 191 QDLLLNALKKE 201 ++ + E Sbjct: 565 GVAVIERNQSE 575 >gi|312213815|emb|CBX93817.1| similar to DNA repair protein rad5 [Leptosphaeria maculans] Length = 1207 Score = 73.4 bits (179), Expect = 2e-11, Method: Composition-based stats. Identities = 41/204 (20%), Positives = 66/204 (32%), Gaps = 28/204 (13%) Query: 14 DLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHW------KEVHDEKIKALE-VIIEKA 66 D + S ++ K Q A D K W + K A++ I+ Sbjct: 956 DTPEAVAQGTRSKARRKKNSQQVC-AGQEDIAKDWLVAQGDDVLPSAKTIAIKAQIMNWT 1014 Query: 67 NAAP---IIVAYHF---NSDLARLQKAFP-------QGRTLDKDPCTIQEW-NEGKIPLL 112 P II+ F S LAR+ G TL I + + I ++ Sbjct: 1015 RKNPQVKIIIYTQFLAMISILARICHNEKWKIEQYHGGMTLHARDKAIASFAEDPDIRIM 1074 Query: 113 FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIA 172 A G GLNL + ++ WW+ QQ R + G + L Sbjct: 1075 LASLRCGGLGLNLTM-ASKVIMMDPWWNSASEQQA-----FCRVFRIGQLEETSMSRLCV 1128 Query: 173 QNTIDELVLQRLRTKSTIQDLLLN 196 NT+D+ ++ K ++ Sbjct: 1129 NNTVDKQLIAMQERKDAEIKSVME 1152 >gi|154334093|ref|XP_001562198.1| j-binding protein [Leishmania braziliensis MHOM/BR/75/M2904] gi|239977156|sp|A4H7G5|JBP2_LEIBR RecName: Full=Bifunctional helicase and thymine dioxygenase JBP2; AltName: Full=J-binding protein 2; Includes: RecName: Full=Probable DNA helicase JBP2; Includes: RecName: Full=Thymine dioxygenase JBP2 gi|134060314|emb|CAM37473.1| putative j-binding protein [Leishmania braziliensis MHOM/BR/75/M2904] Length = 1098 Score = 73.4 bits (179), Expect = 2e-11, Method: Composition-based stats. Identities = 30/165 (18%), Positives = 59/165 (35%), Gaps = 22/165 (13%) Query: 53 DEKIKALEVII--EKANAAPIIVAYHFNSDLARLQKAFPQGRT----------LDKDPCT 100 K++ L I+ +A +I+ + + + R D+ Sbjct: 892 SGKMRVLVDIVLRVQARKEKLIIFSLYVGSQDLIHRTLTALRVCTFTVRGRDSQDRRRRA 951 Query: 101 IQEW-NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQA 159 + E+ + +L +GL N +V F WW+ + Q I R + Sbjct: 952 MHEFSENKDLTVLVLSTKIAAYGLEFT-AANHVVLFDSWWNPQADAQAIAR-----AYRR 1005 Query: 160 GFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIH 204 ++ V VY LI+ T ++ VL+ K + + + K+ T Sbjct: 1006 NQRKPVTVYRLISA-TENKFVLRSQTRKIALFKCIFH--KRTTRQ 1047 >gi|148707811|gb|EDL39758.1| mCG13937, isoform CRA_b [Mus musculus] Length = 1097 Score = 73.0 bits (178), Expect = 2e-11, Method: Composition-based stats. Identities = 34/167 (20%), Positives = 66/167 (39%), Gaps = 20/167 (11%) Query: 49 KEVHDEKIKALEVIIE---KANAAPIIVAYHFNSDLARLQKAFPQGRTL----------- 94 K+ K A++ I+ + ++ +V H S L +A + ++ Sbjct: 344 KQTAIAKAGAVKDYIKMLLQNDSLKFLVFAHHLSMLQACTEAVIESKSRYIRIDGSVPSS 403 Query: 95 DKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 ++ Q + + + G GL + +VF L+WD +Q +R Sbjct: 404 ERIHLVNQFQKDPDTRVAILSIQAAGQGLTFT-AASHVVFAELYWDPGHIKQAEDR---- 458 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 + G +V ++YLIA T+D L+ L K+ + LN K++ Sbjct: 459 -AHRIGQCSSVNIHYLIANGTLDSLMWAMLNRKAQVTGSTLNGRKEK 504 >gi|330878665|gb|EGH12814.1| SNF2-related:helicase [Pseudomonas syringae pv. morsprunorum str. M302280PT] Length = 650 Score = 73.0 bits (178), Expect = 2e-11, Method: Composition-based stats. Identities = 28/154 (18%), Positives = 58/154 (37%), Gaps = 18/154 (11%) Query: 55 KIKALEVIIEKAN-AAPIIVAYHFNSDLARLQKAFPQGRT----------LDKDPCTIQE 103 K++ + ++ + + +I+ + +A L++ + K I Sbjct: 488 KVRIVADLMAELDVDDKVILFCEYQESVATLREHCLKMGIGCVTLVGSDSPKKRQKAIDA 547 Query: 104 WN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFK 162 + + + ++ G G NL N + F L W Q +R + G Sbjct: 548 FQQDPDCRVFIGTRSAAGTGYNLT-AANYVFFLGLPWTPGLQDQAEDR-----AYRNGQL 601 Query: 163 RAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 R V V +A++TID+ + Q L K + L++ Sbjct: 602 RMVVVKIPLAEDTIDQQLWQMLMDKRALASDLID 635 >gi|229174905|ref|ZP_04302425.1| Uncharacterized ATP-dependent helicase yqhH [Bacillus cereus MM3] gi|228608573|gb|EEK65875.1| Uncharacterized ATP-dependent helicase yqhH [Bacillus cereus MM3] Length = 560 Score = 73.0 bits (178), Expect = 2e-11, Method: Composition-based stats. Identities = 30/163 (18%), Positives = 65/163 (39%), Gaps = 21/163 (12%) Query: 44 EEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQ-----GRTLDKDP 98 +K + K +I++ + +I+ + + LQ Q Sbjct: 349 MDKINHIPFNSKANKALELIKEIDDK-VIIFTEYRASQMYLQWFLQQHGISSVPFRGGFK 407 Query: 99 CTIQEW------NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIG 152 ++W N ++ + G G+NLQ+ + ++ + L W+ +Q I RI Sbjct: 408 RGKKDWMKELFQNHAQV---LIATEAGGEGINLQF-CSHMINYDLPWNPMRLEQRIGRI- 462 Query: 153 VTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 + G K V +Y L ++T++E +L+ L K + + ++ Sbjct: 463 ----HRLGQKNDVHIYNLATKHTVEEHILKLLYEKINLFERVI 501 >gi|198429753|ref|XP_002130424.1| PREDICTED: similar to SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1 [Ciona intestinalis] Length = 747 Score = 73.0 bits (178), Expect = 2e-11, Method: Composition-based stats. Identities = 26/173 (15%), Positives = 71/173 (41%), Gaps = 19/173 (10%) Query: 35 LANGAVYYDEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFP--- 89 L++ A+ + + + K+ L+ ++ K + +++ F + L+ Sbjct: 561 LSSRALSTMKLQESSLIDSGKMAHLDEMLPKFKSQNKRVLLFSQFTMMMDILEVYLKLRG 620 Query: 90 ------QGRT-LDKDPCTIQEWNEGK-IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDL 141 G+T + + I +N+ + + + G G+NL +++V + + Sbjct: 621 HRFLRLDGQTPVQERLSYIDSFNKDDSVFIFLLSTKAGGLGINLT-SASVVVLHDIDCNP 679 Query: 142 EEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 +Q +R + G + V V LI+ N+++E + + ++K ++ + Sbjct: 680 YNDKQAEDRC-----HRLGQTKKVEVVKLISVNSVEEGMFKTAQSKLQLEKDM 727 >gi|229019449|ref|ZP_04176271.1| Uncharacterized ATP-dependent helicase yqhH [Bacillus cereus AH1273] gi|229025691|ref|ZP_04182096.1| Uncharacterized ATP-dependent helicase yqhH [Bacillus cereus AH1272] gi|228735630|gb|EEL86220.1| Uncharacterized ATP-dependent helicase yqhH [Bacillus cereus AH1272] gi|228741861|gb|EEL92039.1| Uncharacterized ATP-dependent helicase yqhH [Bacillus cereus AH1273] Length = 560 Score = 73.0 bits (178), Expect = 2e-11, Method: Composition-based stats. Identities = 30/163 (18%), Positives = 65/163 (39%), Gaps = 21/163 (12%) Query: 44 EEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQ-----GRTLDKDP 98 +K + K +I++ + +I+ + + LQ Q Sbjct: 349 MDKINHIPFNSKANKALELIKEIDDK-VIIFTEYRASQMYLQWFLQQHGISSVPFRGGFK 407 Query: 99 CTIQEW------NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIG 152 ++W N ++ + G G+NLQ+ + ++ + L W+ +Q I RI Sbjct: 408 RGKKDWMKELFQNRAQV---LIATEAGGEGINLQF-CSHMINYDLPWNPMRLEQRIGRI- 462 Query: 153 VTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 + G K V +Y L ++T++E +L+ L K + + ++ Sbjct: 463 ----HRLGQKNDVHIYNLATKHTVEEHILKLLYEKINLFERVI 501 >gi|212529714|ref|XP_002145014.1| nucleosome remodeling complex ATPase subunit (Snf2h), putative [Penicillium marneffei ATCC 18224] gi|210074412|gb|EEA28499.1| nucleosome remodeling complex ATPase subunit (Snf2h), putative [Penicillium marneffei ATCC 18224] Length = 900 Score = 73.0 bits (178), Expect = 2e-11, Method: Composition-based stats. Identities = 27/155 (17%), Positives = 52/155 (33%), Gaps = 20/155 (12%) Query: 52 HDEKIKALEVIIEKA---NAAPIIVAYHFNSDLA---------RLQKAFPQGRTLD--KD 97 K ALE +++ N +++ F+ L + G T + Sbjct: 424 TSSKFIALERLLDHEVIQNNKKMLIFAGFDYALDCCQSLLHAMNISHLRLDGNTPYAMRK 483 Query: 98 PCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 + + K + + G + L ++VF W+ Q R Sbjct: 484 LNVHRFQKQDKHRVFVIAMRAGGEDITLT-SAEVIVFMDFDWNPSIMAQAEAR-----AH 537 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQD 192 + G +AV V L + T++ +L+RL K + Sbjct: 538 RIGQTKAVTVVKLCTRGTVESQMLERLNNKLYLAS 572 >gi|302063910|ref|ZP_07255451.1| SNF2-related:helicase, C-terminal [Pseudomonas syringae pv. tomato K40] Length = 331 Score = 73.0 bits (178), Expect = 2e-11, Method: Composition-based stats. Identities = 28/154 (18%), Positives = 58/154 (37%), Gaps = 18/154 (11%) Query: 55 KIKALEVIIEKAN-AAPIIVAYHFNSDLARLQKAFPQGRT----------LDKDPCTIQE 103 K++ + ++ + + +I+ + +A L++ + K I Sbjct: 169 KVRIVADLMAELDVDDKVILFCEYQESVATLREHCLKMGIGCVTLVGSDSPKKRQKAIDA 228 Query: 104 WN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFK 162 + + + ++ G G NL N + F L W Q +R + G Sbjct: 229 FQQDPDCRVFIGTRSAAGTGYNLT-AANYVFFLGLPWTPGLQDQAEDR-----AYRNGQL 282 Query: 163 RAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 R V V +A++TID+ + Q L K + L++ Sbjct: 283 RMVVVKIPLAEDTIDQQLWQMLMDKRALASDLID 316 >gi|291235012|ref|XP_002737441.1| PREDICTED: chromodomain helicase DNA binding protein 1-like [Saccoglossus kowalevskii] Length = 834 Score = 73.0 bits (178), Expect = 2e-11, Method: Composition-based stats. Identities = 22/148 (14%), Positives = 52/148 (35%), Gaps = 35/148 (23%) Query: 52 HDEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKI 109 K+ L+ ++ N A +++ L +Q Sbjct: 251 ASAKLHLLDQLLSFLNSRAHKVLLFSQMTRMLDIIQDYLGYR------------------ 292 Query: 110 PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYY 169 G GLNL + ++F ++ + Q R + G + V + Sbjct: 293 ---------GGQGLNL-ASADTVIFVDSDFNPQNDLQAAAR-----AHRIGQTKPVKIIR 337 Query: 170 LIAQNTIDELVLQRLRTKSTIQDLLLNA 197 L+ ++T++E++L+R K ++ + ++ Sbjct: 338 LVGRDTVEEIILKRADEKLSLTNTVIEG 365 >gi|289549357|ref|YP_003474345.1| helicase [Thermocrinis albus DSM 14484] gi|289182974|gb|ADC90218.1| helicase domain protein [Thermocrinis albus DSM 14484] Length = 1107 Score = 73.0 bits (178), Expect = 2e-11, Method: Composition-based stats. Identities = 36/170 (21%), Positives = 72/170 (42%), Gaps = 18/170 (10%) Query: 28 KTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKA 87 K + +Q A V ++E E+ K E I + I++ L L K Sbjct: 443 KLGELIQKAEKIVKSEKEVKLSELKTAIEKGFEEIRKMGGNPKILIFTESRDTLEYLVKK 502 Query: 88 FPQ----------GRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSL 137 T+D+ + + + ++ A + G G+NLQ+ +I++ + + Sbjct: 503 ISGWGYTVNYIHGDMTIDERIKEEKRF-RDETQIMVA-TEAAGEGINLQF-CHIMINYDI 559 Query: 138 WWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTK 187 W+ +Q + RI + G ++ V ++ L+A++TI+ VL +L K Sbjct: 560 PWNPNRLEQRMGRI-----HRYGQQKDVHIFNLVAEDTIEGQVLVKLFEK 604 >gi|194288961|ref|YP_002004868.1| hypothetical protein RALTA_A0827 [Cupriavidus taiwanensis LMG 19424] gi|193222796|emb|CAQ68799.1| conserved hypothetical protein, putative DNA-binding ATP-binding helicase [Cupriavidus taiwanensis LMG 19424] Length = 1097 Score = 73.0 bits (178), Expect = 2e-11, Method: Composition-based stats. Identities = 38/165 (23%), Positives = 60/165 (36%), Gaps = 29/165 (17%) Query: 54 EKIKALEVIIEKANAAPIIVAYHFN---SDLARLQKAF-------------PQGRTLDKD 97 E++KAL E++ +IV F L R+ AF R Sbjct: 928 ERLKALA--AERSGNHKVIVFCEFRELQLLLQRVIAAFFGFAPDIVNGDTSADPRVAHSR 985 Query: 98 PCTIQEWNE-GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 I + + + P + G G+N+Q N +V F+ W+ + Q R Sbjct: 986 QRLIDRFQDQPGFHAIILSPLAVGFGVNIQ-AANHVVHFTRTWNPAKEDQATAR-----A 1039 Query: 157 RQAGFKRAVFVYY---LIAQ-NTIDELVLQRLRTKSTIQDLLLNA 197 + G R V VYY + AQ + D + L K + +LN Sbjct: 1040 YRIGQTRTVTVYYPGVISAQFPSFDVRLDALLGRKRELAADMLNG 1084 >gi|66805677|ref|XP_636560.1| SNF2-related domain-containing protein [Dictyostelium discoideum AX4] gi|60464943|gb|EAL63058.1| SNF2-related domain-containing protein [Dictyostelium discoideum AX4] Length = 1332 Score = 73.0 bits (178), Expect = 2e-11, Method: Composition-based stats. Identities = 31/153 (20%), Positives = 55/153 (35%), Gaps = 19/153 (12%) Query: 45 EKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEW 104 + H + + +K LE I+ H R+ + + K I + Sbjct: 821 DGHRVLMFSQSVKMLEDF--------EILLDHLGLTYLRIDGSISSTK---KRQEIIDLY 869 Query: 105 NEG-KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKR 163 N GLNL +L+ W+ I+ V R + G K+ Sbjct: 870 NTDMSYFAFIMTIQVGALGLNLTSADRVLIL-DPSWN------TIDNQAVDRAYRIGQKK 922 Query: 164 AVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 V VY L++ TI+E + ++ K ++ +LN Sbjct: 923 DVVVYRLMSCGTIEEKIYRKQVFKGSLMKTMLN 955 >gi|66800837|ref|XP_629344.1| SNF2-related domain-containing protein [Dictyostelium discoideum AX4] gi|60462710|gb|EAL60912.1| SNF2-related domain-containing protein [Dictyostelium discoideum AX4] Length = 2205 Score = 73.0 bits (178), Expect = 2e-11, Method: Composition-based stats. Identities = 26/120 (21%), Positives = 46/120 (38%), Gaps = 12/120 (10%) Query: 80 DLARLQKAFPQGRTLDKDPCTIQEWNE--GKIPLLFAHPASCGHGLNLQYGGNILVFFSL 137 D RL + P I ++N+ I L + G NL GG ++ L Sbjct: 1938 DYFRLDGSTPT----KTRQRLIDQFNDMANDIKLFLISTKAGSLGTNLT-GGTRVILMDL 1992 Query: 138 WWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 W+ +Q + R + G K V VY L+ T ++ ++ K T+ +++ Sbjct: 1993 SWNPVHDRQAVYRC-----YRMGQKNQVHVYTLVMAGTGEQKTYTQMIYKQTLSKRAVDS 2047 >gi|239977150|sp|B6EU02|JBP2_LEITA RecName: Full=Bifunctional helicase and thymine dioxygenase JBP2; AltName: Full=J-binding protein 2; Short=LtJBP2; Includes: RecName: Full=Probable DNA helicase JBP2; Includes: RecName: Full=Thymine dioxygenase JBP2 gi|209407460|emb|CAR82639.1| J-binding protein 2 [Leishmania tarentolae] Length = 1098 Score = 73.0 bits (178), Expect = 2e-11, Method: Composition-based stats. Identities = 30/156 (19%), Positives = 57/156 (36%), Gaps = 20/156 (12%) Query: 53 DEKIKALEVII--EKANAAPIIVAYHFNSDLARLQKAFPQGRT----------LDKDPCT 100 K++ L I+ +A +I+ + + + R D+ Sbjct: 892 SGKMRVLVDIVLRVQARKEKLIIFSLYVGSQDLIHRTLTALRVCTFTVRGRDSQDRRRRA 951 Query: 101 IQEW-NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQA 159 +QE+ + +L +GL+ N +V F WW+ + Q I R + Sbjct: 952 MQEFSENKDLIVLVLSTKIAAYGLDFT-AANHVVLFDSWWNPQVDAQAIAR-----AYRR 1005 Query: 160 GFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 ++ V VY LI+ T ++ VL K + +L Sbjct: 1006 NQRKPVTVYRLISA-TENKFVLSSQTRKIALFKCIL 1040 >gi|4056415|gb|AAC97989.1| Similar to the end of DNA repair protein gb|X74615 (rad8) gene [Arabidopsis thaliana] Length = 95 Score = 73.0 bits (178), Expect = 2e-11, Method: Composition-based stats. Identities = 17/82 (20%), Positives = 35/82 (42%), Gaps = 6/82 (7%) Query: 116 PASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNT 175 + G LNL ++ + WW+ +ER R + G + + V I +NT Sbjct: 1 LKAGGVALNLTVASHVFMM-DPWWN-----PAVERQAQDRIHRIGQYKPIRVVRFIIENT 54 Query: 176 IDELVLQRLRTKSTIQDLLLNA 197 ++E +L+ + K + + + Sbjct: 55 VEERILRLQKKKELVFEGTVGG 76 >gi|322487766|emb|CBZ23007.1| putative DNA excision/repair protein SNF2 [Leishmania mexicana MHOM/GT/2001/U1103] Length = 927 Score = 73.0 bits (178), Expect = 2e-11, Method: Composition-based stats. Identities = 19/106 (17%), Positives = 42/106 (39%), Gaps = 10/106 (9%) Query: 95 DKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGV 153 ++ ++ +N + + + G GL + +V W+ Q ++R+ Sbjct: 533 ERRCAEVERFNKDAGVWVCLLTTQVGGVGLTF-NAASAVVLLDPSWNPSADAQAVDRV-- 589 Query: 154 TRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 + G +R V V+ L+ T++E V + K L ++K Sbjct: 590 ---HRIGQRRDVVVFRLVTCGTVEEKVYRNQIFKRMAA---LQSMK 629 >gi|183233301|ref|XP_654593.2| helicase [Entamoeba histolytica HM-1:IMSS] gi|169801642|gb|EAL49206.2| helicase, putative [Entamoeba histolytica HM-1:IMSS] Length = 956 Score = 73.0 bits (178), Expect = 2e-11, Method: Composition-based stats. Identities = 32/158 (20%), Positives = 62/158 (39%), Gaps = 19/158 (12%) Query: 53 DEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQKAFPQ---------GRTLDK-DPCT 100 K+K + ++K ++V H L ++ + G T Sbjct: 401 TAKLKGVCSFLDKMIIEGKKLLVFGHHQEMLDGIETYIKENNIEYIRIDGSTNASLRAKY 460 Query: 101 IQEWNEGK-IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQA 159 + + + K I + + G G+ L + + +VF L+W +Q +R+ + Sbjct: 461 VDRFQKEKRIRIAILSVTAAGTGITL-HSADTVVFAELYWTPGVLRQAEDRV-----HRI 514 Query: 160 GFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 G K V ++YLI + T+D+L+ L K I L+ Sbjct: 515 GQKNDVRIFYLIGKQTVDDLIWPLLEKKLKISGETLDG 552 >gi|157878809|ref|XP_001687416.1| DNA excision/repair protein SNF2 [Leishmania major strain Friedlin] gi|321438075|emb|CBZ11827.1| putative DNA excision/repair protein SNF2 [Leishmania major strain Friedlin] Length = 925 Score = 73.0 bits (178), Expect = 2e-11, Method: Composition-based stats. Identities = 25/154 (16%), Positives = 54/154 (35%), Gaps = 21/154 (13%) Query: 58 ALEVIIEK-ANAAPIIVAYHFNSDLARLQKAFPQGRTL----------DKDPCTIQEWNE 106 AL++++ + +V L L + R ++ + +N Sbjct: 485 ALQLLLHCVSEQRKTLVFSRSRRILRLLSFLLQEWRLTHTQVDGDTPSERRCAEVDRFNN 544 Query: 107 GK-IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 + + G GL + +V W+ Q ++R+ + G +R V Sbjct: 545 DAGVWVCLLTTQVGGVGLTF-NAASAVVLLDPSWNPSADAQAVDRV-----HRIGQRRDV 598 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 V+ L+ +T++E V + K L ++K Sbjct: 599 VVFRLVTCDTVEEKVYRNQIFKRMAA---LQSMK 629 >gi|322496039|emb|CBZ31111.1| unnamed protein product [Leishmania donovani BPK282A1] Length = 776 Score = 73.0 bits (178), Expect = 2e-11, Method: Composition-based stats. Identities = 24/145 (16%), Positives = 49/145 (33%), Gaps = 20/145 (13%) Query: 66 ANAAPIIVAYHFNSDLARLQKAFPQGRTL----------DKDPCTIQEWNEGK-IPLLFA 114 + +V L L + R ++ ++ +N + + Sbjct: 347 SEQRKTLVFSRSRRFLHLLSFLLQEWRLTHTQVDGNTPSERRCAEVERFNNDAGVWVCLL 406 Query: 115 HPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQN 174 G GL + +V + W+ Q I+R+ + G +R V V+ L+ Sbjct: 407 TTQVGGVGLTF-NAASAVVLLDISWNPSADAQAIDRV-----HRIGQRRDVVVFRLVTCG 460 Query: 175 TIDELVLQRLRTKSTIQDLLLNALK 199 T++E V + K L ++K Sbjct: 461 TVEEKVYRNQIFKRMAA---LQSMK 482 >gi|321398837|emb|CAM65175.2| putative DNA excision/repair protein SNF2 [Leishmania infantum JPCM5] Length = 776 Score = 73.0 bits (178), Expect = 2e-11, Method: Composition-based stats. Identities = 24/145 (16%), Positives = 49/145 (33%), Gaps = 20/145 (13%) Query: 66 ANAAPIIVAYHFNSDLARLQKAFPQGRTL----------DKDPCTIQEWNEGK-IPLLFA 114 + +V L L + R ++ ++ +N + + Sbjct: 347 SEQRKTLVFSRSRRFLHLLSFLLQEWRLTHTQVDGNTPSERRCAEVERFNNDAGVWVCLL 406 Query: 115 HPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQN 174 G GL + +V + W+ Q I+R+ + G +R V V+ L+ Sbjct: 407 TTQVGGVGLTF-NAASAVVLLDISWNPSADAQAIDRV-----HRIGQRRDVVVFRLVTCG 460 Query: 175 TIDELVLQRLRTKSTIQDLLLNALK 199 T++E V + K L ++K Sbjct: 461 TVEEKVYRNQIFKRMAA---LQSMK 482 >gi|229013447|ref|ZP_04170584.1| Uncharacterized ATP-dependent helicase yqhH [Bacillus mycoides DSM 2048] gi|229061920|ref|ZP_04199248.1| Uncharacterized ATP-dependent helicase yqhH [Bacillus cereus AH603] gi|229135050|ref|ZP_04263855.1| Uncharacterized ATP-dependent helicase yqhH [Bacillus cereus BDRD-ST196] gi|229168972|ref|ZP_04296689.1| Uncharacterized ATP-dependent helicase yqhH [Bacillus cereus AH621] gi|228614564|gb|EEK71672.1| Uncharacterized ATP-dependent helicase yqhH [Bacillus cereus AH621] gi|228648435|gb|EEL04465.1| Uncharacterized ATP-dependent helicase yqhH [Bacillus cereus BDRD-ST196] gi|228717363|gb|EEL69033.1| Uncharacterized ATP-dependent helicase yqhH [Bacillus cereus AH603] gi|228747859|gb|EEL97725.1| Uncharacterized ATP-dependent helicase yqhH [Bacillus mycoides DSM 2048] Length = 560 Score = 73.0 bits (178), Expect = 2e-11, Method: Composition-based stats. Identities = 30/163 (18%), Positives = 65/163 (39%), Gaps = 21/163 (12%) Query: 44 EEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQ-----GRTLDKDP 98 +K + K +I++ + +I+ + + LQ Q Sbjct: 349 MDKINHIPFNSKANKALELIKEVDDK-VIIFTEYRASQMYLQWFLQQHGISSVPFRGGFK 407 Query: 99 CTIQEW------NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIG 152 ++W N ++ + G G+NLQ+ + ++ + L W+ +Q I RI Sbjct: 408 RGKKDWMKELFQNHAQV---LIATEAGGEGINLQF-CSHMINYDLPWNPMRLEQRIGRI- 462 Query: 153 VTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 + G K V +Y L ++T++E +L+ L K + + ++ Sbjct: 463 ----HRLGQKNDVHIYNLATKHTVEEHILKLLYEKINLFERVI 501 >gi|163854526|ref|YP_001628824.1| helicase, putative [Bordetella petrii DSM 12804] gi|163258254|emb|CAP40553.1| helicase, putative [Bordetella petrii] Length = 1246 Score = 73.0 bits (178), Expect = 2e-11, Method: Composition-based stats. Identities = 31/166 (18%), Positives = 63/166 (37%), Gaps = 29/166 (17%) Query: 53 DEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQ----------------GRTLDK 96 D ++ L++I + +I+ F + L+ + D Sbjct: 916 DWLLEQLKLI--QKKDEKVIIFCEFRNIQRLLRHYIEEQFNIFPPIINGDTSATAGHADS 973 Query: 97 DPCTIQEWNEGK-IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTR 155 I+++ E + P + G G+N+Q N ++ ++ W+ + Q +R Sbjct: 974 RQRQIKKFQEAAGFGAIILSPVAVGFGVNIQ-AANHVIHYTRTWNPAKEDQATDR----- 1027 Query: 156 QRQAGFKRAVFVYYLIAQ----NTIDELVLQRLRTKSTIQDLLLNA 197 + G K+ V+VYY + + T D + Q L K + +LN Sbjct: 1028 AYRIGQKKDVYVYYPVVKADDFATFDVKLDQLLTRKRELAGDMLNG 1073 >gi|108756908|ref|YP_635362.1| SNF2 domain/helicase domain-containing protein [Myxococcus xanthus DK 1622] gi|108460788|gb|ABF85973.1| SNF2 domain/helicase domain protein [Myxococcus xanthus DK 1622] Length = 994 Score = 73.0 bits (178), Expect = 2e-11, Method: Composition-based stats. Identities = 31/154 (20%), Positives = 55/154 (35%), Gaps = 21/154 (13%) Query: 58 ALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGK-IPLLFAHP 116 A++ ++ + ++A F + P R I ++ K +L P Sbjct: 841 AMQDLLAQ------LIAERFRLGRVDIVNGEPDSR--KAALQNIDAFSRAKGFQVLILSP 892 Query: 117 ASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYY--LIAQN 174 + G GLN+ N ++ + WW+ + Q +R + G R V VYY L Q Sbjct: 893 LAAGAGLNI-VAANHVIHYGRWWNPAKEDQATDR-----AHRIGQVRPVHVYYPLLHRQG 946 Query: 175 TIDE----LVLQRLRTKSTIQDLLLNALKKETIH 204 D + + K I L+ +T Sbjct: 947 RPDMGFDLRLHDLVERKRAIARDFLSPTNDDTQQ 980 >gi|242087829|ref|XP_002439747.1| hypothetical protein SORBIDRAFT_09g019410 [Sorghum bicolor] gi|241945032|gb|EES18177.1| hypothetical protein SORBIDRAFT_09g019410 [Sorghum bicolor] Length = 1535 Score = 73.0 bits (178), Expect = 2e-11, Method: Composition-based stats. Identities = 26/152 (17%), Positives = 58/152 (38%), Gaps = 24/152 (15%) Query: 62 IIEKANAAPIIVAYHFNSDLARLQKAFPQ--------------GRTLDK-DPCTIQEWNE 106 + E +++ + L +++ + G+ L + +I+ +N Sbjct: 1326 LCEAL-REKVLIFSQYIQPLELIKEHLRKFFKWREGKEILQMDGKILPRYRQASIEAFNN 1384 Query: 107 GKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA 164 +L A +C G++L G + +V + W+ + R ++R + G K+ Sbjct: 1385 PNNESRVLLASTRACCEGISLT-GASRVVLLDVVWN-----PAVGRQAISRAFRIGQKKF 1438 Query: 165 VFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 V+ Y LI T + R K + L+ + Sbjct: 1439 VYTYNLITYGTGEGDKYDRQAEKDHLSKLVFS 1470 >gi|229031878|ref|ZP_04187866.1| Uncharacterized ATP-dependent helicase yqhH [Bacillus cereus AH1271] gi|228729496|gb|EEL80485.1| Uncharacterized ATP-dependent helicase yqhH [Bacillus cereus AH1271] Length = 560 Score = 73.0 bits (178), Expect = 2e-11, Method: Composition-based stats. Identities = 29/163 (17%), Positives = 65/163 (39%), Gaps = 21/163 (12%) Query: 44 EEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQ-----GRTLDKDP 98 +K + K +I++ + +++ + + LQ Q Sbjct: 349 MDKINHIPFNSKANKALELIKEIDDK-VVIFTEYRASQMYLQWFLQQHGISSVPFRGGFK 407 Query: 99 CTIQEW------NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIG 152 ++W N ++ + G G+NLQ+ + ++ + L W+ +Q I RI Sbjct: 408 RGKKDWMKELFQNHAQV---LIATEAGGEGINLQF-CSHMINYDLPWNPMRLEQRIGRI- 462 Query: 153 VTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 + G K V +Y L ++T++E +L+ L K + + ++ Sbjct: 463 ----HRLGQKNDVHIYNLATKHTVEEHILKLLYEKINLFERVI 501 >gi|212539075|ref|XP_002149693.1| alpha-1,6-mannosyltransferase subunit, putative [Penicillium marneffei ATCC 18224] gi|210069435|gb|EEA23526.1| alpha-1,6-mannosyltransferase subunit, putative [Penicillium marneffei ATCC 18224] Length = 1874 Score = 72.7 bits (177), Expect = 3e-11, Method: Composition-based stats. Identities = 21/141 (14%), Positives = 48/141 (34%), Gaps = 17/141 (12%) Query: 68 AAPIIVAYHFNSDLARLQKAFPQGRT----------LDKDPCTIQEWN-EGKIPLLFAHP 116 +V + L ++ Q + + I ++ + + +L Sbjct: 841 DVKSVVFSTWRMSLDVVESGLKQAQIPCLRFDGKVPQKERKSVIDKFKHDPSVSVLLLTL 900 Query: 117 ASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTI 176 + GL L + W+ +Q + RI + G K+ V ++T Sbjct: 901 SCGAVGLTLTE-ASCAYLMEPHWNPTVEEQALARI-----HRLGQKKEVTTVRFYIKDTF 954 Query: 177 DELVLQRLRTKSTIQDLLLNA 197 +E V++ R+K + L ++ Sbjct: 955 EERVMELQRSKDELAGTLFSS 975 >gi|218905364|ref|YP_002453198.1| putative helicase [Bacillus cereus AH820] gi|229123746|ref|ZP_04252941.1| Uncharacterized ATP-dependent helicase yqhH [Bacillus cereus 95/8201] gi|218536349|gb|ACK88747.1| putative helicase [Bacillus cereus AH820] gi|228659881|gb|EEL15526.1| Uncharacterized ATP-dependent helicase yqhH [Bacillus cereus 95/8201] Length = 560 Score = 72.7 bits (177), Expect = 3e-11, Method: Composition-based stats. Identities = 29/163 (17%), Positives = 65/163 (39%), Gaps = 21/163 (12%) Query: 44 EEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQ-----GRTLDKDP 98 +K + K +I++ + +++ + + LQ Q Sbjct: 349 MDKINHIPFNSKANKALELIKEIDDK-VVIFTEYRASQMYLQWFLQQHGISSVPFRGGFK 407 Query: 99 CTIQEW------NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIG 152 ++W N ++ + G G+NLQ+ + ++ + L W+ +Q I RI Sbjct: 408 RGKKDWMKELFQNHAQV---LIATEAGGEGINLQF-CSHMINYDLPWNPMRLEQRIGRI- 462 Query: 153 VTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 + G K V +Y L ++T++E +L+ L K + + ++ Sbjct: 463 ----HRLGQKNDVHIYNLATKHTVEEHILKLLYEKINLFERVI 501 >gi|217961719|ref|YP_002340289.1| putative helicase [Bacillus cereus AH187] gi|229140962|ref|ZP_04269506.1| Uncharacterized ATP-dependent helicase yqhH [Bacillus cereus BDRD-ST26] gi|217067475|gb|ACJ81725.1| putative helicase [Bacillus cereus AH187] gi|228642538|gb|EEK98825.1| Uncharacterized ATP-dependent helicase yqhH [Bacillus cereus BDRD-ST26] Length = 560 Score = 72.7 bits (177), Expect = 3e-11, Method: Composition-based stats. Identities = 29/163 (17%), Positives = 65/163 (39%), Gaps = 21/163 (12%) Query: 44 EEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQ-----GRTLDKDP 98 +K + K +I++ + +++ + + LQ Q Sbjct: 349 MDKINHIPFNSKANKALELIKEIDDK-VVIFTEYRASQMYLQWFLQQHGISSVPFRGGFK 407 Query: 99 CTIQEW------NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIG 152 ++W N ++ + G G+NLQ+ + ++ + L W+ +Q I RI Sbjct: 408 RGKKDWMKELFQNHAQV---LIATEAGGEGINLQF-CSHMINYDLPWNPMRLEQRIGRI- 462 Query: 153 VTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 + G K V +Y L ++T++E +L+ L K + + ++ Sbjct: 463 ----HRLGQKNDVHIYNLATKHTVEEHILKLLYEKINLFERVI 501 >gi|118479411|ref|YP_896562.1| SNF2 family helicase [Bacillus thuringiensis str. Al Hakam] gi|118418636|gb|ABK87055.1| helicase, SNF2 family [Bacillus thuringiensis str. Al Hakam] Length = 560 Score = 72.7 bits (177), Expect = 3e-11, Method: Composition-based stats. Identities = 29/163 (17%), Positives = 65/163 (39%), Gaps = 21/163 (12%) Query: 44 EEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQ-----GRTLDKDP 98 +K + K +I++ + +++ + + LQ Q Sbjct: 349 MDKINHIPFNSKANKALELIKEIDDK-VVIFTEYRASQMYLQWFLQQHGISSVPFRGGFK 407 Query: 99 CTIQEW------NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIG 152 ++W N ++ + G G+NLQ+ + ++ + L W+ +Q I RI Sbjct: 408 RGKKDWMKELFQNHAQV---LIATEAGGEGINLQF-CSHMINYDLPWNPMRLEQRIGRI- 462 Query: 153 VTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 + G K V +Y L ++T++E +L+ L K + + ++ Sbjct: 463 ----HRLGQKNDVHIYNLATKHTVEEHILKLLYEKINLFERVI 501 >gi|117646930|emb|CAL37580.1| hypothetical protein [synthetic construct] Length = 1077 Score = 72.7 bits (177), Expect = 3e-11, Method: Composition-based stats. Identities = 37/170 (21%), Positives = 67/170 (39%), Gaps = 21/170 (12%) Query: 49 KEVHDEKIKALEVIIE---KANAAPIIVAYHFNSDLARLQKAFPQGRTL----------- 94 K+ K A++ I+ + ++ +V H S L +A + +T Sbjct: 316 KQTAIAKAGAVKDYIKMMLQNDSLKFLVFAHHLSMLQACTEAVIENKTRYIRIDGSVSSS 375 Query: 95 DKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 ++ Q + + + G GL + +VF L+WD +Q +R Sbjct: 376 ERIHLVNQFQKDPDTRVAILSIQAAGQGLTFT-AASHVVFAELYWDPGHIKQAEDR---- 430 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIH 204 + G +V ++YLIA T+D L+ L K+ + LN +KE I Sbjct: 431 -AHRIGQCSSVNIHYLIANGTLDTLMWGMLNRKAQVTGSTLNG-RKEKIQ 478 >gi|62860046|ref|NP_115519.2| zinc finger Ran-binding domain-containing protein 3 [Homo sapiens] gi|74741477|sp|Q5FWF4|ZRAB3_HUMAN RecName: Full=Zinc finger Ran-binding domain-containing protein 3 gi|66840172|gb|AAH89429.2| Zinc finger, RAN-binding domain containing 3 [Homo sapiens] Length = 1079 Score = 72.7 bits (177), Expect = 3e-11, Method: Composition-based stats. Identities = 37/170 (21%), Positives = 67/170 (39%), Gaps = 21/170 (12%) Query: 49 KEVHDEKIKALEVIIE---KANAAPIIVAYHFNSDLARLQKAFPQGRTL----------- 94 K+ K A++ I+ + ++ +V H S L +A + +T Sbjct: 316 KQTAIAKAGAVKDYIKMMLQNDSLKFLVFAHHLSMLQACTEAVIENKTRYIRIDGSVSSS 375 Query: 95 DKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 ++ Q + + + G GL + +VF L+WD +Q +R Sbjct: 376 ERIHLVNQFQKDPDTRVAILSIQAAGQGLTFT-AASHVVFAELYWDPGHIKQAEDR---- 430 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIH 204 + G +V ++YLIA T+D L+ L K+ + LN +KE I Sbjct: 431 -AHRIGQCSSVNIHYLIANGTLDTLMWGMLNRKAQVTGSTLNG-RKEKIQ 478 >gi|30264301|ref|NP_846678.1| helicase, putative [Bacillus anthracis str. Ames] gi|47529745|ref|YP_021094.1| helicase [Bacillus anthracis str. 'Ames Ancestor'] gi|49187129|ref|YP_030381.1| helicase [Bacillus anthracis str. Sterne] gi|49480946|ref|YP_038291.1| SNF2 family helicase [Bacillus thuringiensis serovar konkukian str. 97-27] gi|52141268|ref|YP_085562.1| SNF2 family helicase [Bacillus cereus E33L] gi|165873273|ref|ZP_02217882.1| putative helicase [Bacillus anthracis str. A0488] gi|167634666|ref|ZP_02392986.1| putative helicase [Bacillus anthracis str. A0442] gi|167638582|ref|ZP_02396858.1| putative helicase [Bacillus anthracis str. A0193] gi|170687388|ref|ZP_02878605.1| putative helicase [Bacillus anthracis str. A0465] gi|170709332|ref|ZP_02899748.1| putative helicase [Bacillus anthracis str. A0389] gi|177655894|ref|ZP_02937086.1| putative helicase [Bacillus anthracis str. A0174] gi|190566152|ref|ZP_03019071.1| putative helicase [Bacillus anthracis Tsiankovskii-I] gi|196041595|ref|ZP_03108887.1| putative helicase [Bacillus cereus NVH0597-99] gi|196046379|ref|ZP_03113605.1| putative helicase [Bacillus cereus 03BB108] gi|225866210|ref|YP_002751588.1| putative helicase [Bacillus cereus 03BB102] gi|227817002|ref|YP_002817011.1| putative helicase [Bacillus anthracis str. CDC 684] gi|228929272|ref|ZP_04092299.1| Uncharacterized ATP-dependent helicase yqhH [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] gi|228947944|ref|ZP_04110231.1| Uncharacterized ATP-dependent helicase yqhH [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] gi|229093287|ref|ZP_04224403.1| Uncharacterized ATP-dependent helicase yqhH [Bacillus cereus Rock3-42] gi|229186470|ref|ZP_04313633.1| Uncharacterized ATP-dependent helicase yqhH [Bacillus cereus BGSC 6E1] gi|229601677|ref|YP_002868519.1| putative helicase [Bacillus anthracis str. A0248] gi|254683989|ref|ZP_05147849.1| putative helicase [Bacillus anthracis str. CNEVA-9066] gi|254721823|ref|ZP_05183612.1| putative helicase [Bacillus anthracis str. A1055] gi|254736337|ref|ZP_05194043.1| putative helicase [Bacillus anthracis str. Western North America USA6153] gi|254741375|ref|ZP_05199062.1| putative helicase [Bacillus anthracis str. Kruger B] gi|254753990|ref|ZP_05206025.1| putative helicase [Bacillus anthracis str. Vollum] gi|254757861|ref|ZP_05209888.1| putative helicase [Bacillus anthracis str. Australia 94] gi|301055721|ref|YP_003793932.1| putative helicase [Bacillus anthracis CI] gi|30258946|gb|AAP28164.1| putative helicase [Bacillus anthracis str. Ames] gi|47504893|gb|AAT33569.1| putative helicase [Bacillus anthracis str. 'Ames Ancestor'] gi|49181056|gb|AAT56432.1| helicase, putative [Bacillus anthracis str. Sterne] gi|49332502|gb|AAT63148.1| possible helicase, SNF2 family [Bacillus thuringiensis serovar konkukian str. 97-27] gi|51974737|gb|AAU16287.1| possible helicase, SNF2 family [Bacillus cereus E33L] gi|164710990|gb|EDR16558.1| putative helicase [Bacillus anthracis str. A0488] gi|167513430|gb|EDR88800.1| putative helicase [Bacillus anthracis str. A0193] gi|167530118|gb|EDR92853.1| putative helicase [Bacillus anthracis str. A0442] gi|170125758|gb|EDS94669.1| putative helicase [Bacillus anthracis str. A0389] gi|170668583|gb|EDT19329.1| putative helicase [Bacillus anthracis str. A0465] gi|172079927|gb|EDT65032.1| putative helicase [Bacillus anthracis str. A0174] gi|190563071|gb|EDV17037.1| putative helicase [Bacillus anthracis Tsiankovskii-I] gi|196022849|gb|EDX61530.1| putative helicase [Bacillus cereus 03BB108] gi|196027583|gb|EDX66198.1| putative helicase [Bacillus cereus NVH0597-99] gi|225789095|gb|ACO29312.1| putative helicase [Bacillus cereus 03BB102] gi|227007674|gb|ACP17417.1| putative helicase [Bacillus anthracis str. CDC 684] gi|228596984|gb|EEK54641.1| Uncharacterized ATP-dependent helicase yqhH [Bacillus cereus BGSC 6E1] gi|228690092|gb|EEL43888.1| Uncharacterized ATP-dependent helicase yqhH [Bacillus cereus Rock3-42] gi|228811931|gb|EEM58265.1| Uncharacterized ATP-dependent helicase yqhH [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] gi|228830562|gb|EEM76172.1| Uncharacterized ATP-dependent helicase yqhH [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] gi|229266085|gb|ACQ47722.1| putative helicase [Bacillus anthracis str. A0248] gi|300377890|gb|ADK06794.1| possible helicase, SNF2 family [Bacillus cereus biovar anthracis str. CI] Length = 560 Score = 72.7 bits (177), Expect = 3e-11, Method: Composition-based stats. Identities = 29/163 (17%), Positives = 65/163 (39%), Gaps = 21/163 (12%) Query: 44 EEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQ-----GRTLDKDP 98 +K + K +I++ + +++ + + LQ Q Sbjct: 349 MDKINHIPFNSKANKALELIKEIDDK-VVIFTEYRASQMYLQWFLQQHGISSVPFRGGFK 407 Query: 99 CTIQEW------NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIG 152 ++W N ++ + G G+NLQ+ + ++ + L W+ +Q I RI Sbjct: 408 RGKKDWMKELFQNHAQV---LIATEAGGEGINLQF-CSHMINYDLPWNPMRLEQRIGRI- 462 Query: 153 VTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 + G K V +Y L ++T++E +L+ L K + + ++ Sbjct: 463 ----HRLGQKNDVHIYNLATKHTVEEHILKLLYEKINLFERVI 501 >gi|323454846|gb|EGB10715.1| hypothetical protein AURANDRAFT_62160 [Aureococcus anophagefferens] Length = 734 Score = 72.7 bits (177), Expect = 3e-11, Method: Composition-based stats. Identities = 21/83 (25%), Positives = 38/83 (45%), Gaps = 6/83 (7%) Query: 117 ASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTI 176 + G GL L G + L+ F W+ + Q R+ + G R F+Y L +++ Sbjct: 582 KAGGVGLTLT-GASRLILFEPSWNPADDDQAAARVW-----RDGQTRPTFIYTLATAHSL 635 Query: 177 DELVLQRLRTKSTIQDLLLNALK 199 +E VL+R K + + +A + Sbjct: 636 EEHVLKRQAAKRNLAGRVRHAQR 658 >gi|310796546|gb|EFQ32007.1| SNF2 family domain-containing protein [Glomerella graminicola M1.001] Length = 1262 Score = 72.7 bits (177), Expect = 3e-11, Method: Composition-based stats. Identities = 32/173 (18%), Positives = 64/173 (36%), Gaps = 26/173 (15%) Query: 47 HWKEVHDEKIKALEVII----EKANAAPIIVAYHF---------NSDLARLQKAFPQGR- 92 + K+ AL+ + +A II+ F + + A+ G+ Sbjct: 1032 NVPLTPSAKMTALKETVLRWQAEAPEDKIIIFSQFAVVMKIIGRVLESEGICFAYLSGKQ 1091 Query: 93 -TLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERI 151 T ++ + N ++ +L + G LNL+ G N ++ LWW+ QQ R+ Sbjct: 1092 NTEQRNKAVSEFQNGEEVKVLIVSLRAGGQCLNLERG-NRVILMELWWNHAVEQQAFARV 1150 Query: 152 GVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTK-----STIQDLLLNALK 199 + G + + + I+ +L+ K + +QD + A K Sbjct: 1151 F-----RIGQSKETHFLRFVVKTPIENRMLEMQVGKILAIDNALQDETVRAPK 1198 >gi|297471769|ref|XP_002685457.1| PREDICTED: zinc finger, RAN-binding domain containing 3 [Bos taurus] gi|296490526|gb|DAA32639.1| zinc finger, RAN-binding domain containing 3 [Bos taurus] Length = 1074 Score = 72.7 bits (177), Expect = 3e-11, Method: Composition-based stats. Identities = 37/180 (20%), Positives = 71/180 (39%), Gaps = 20/180 (11%) Query: 36 ANGAVYYDEEKHWKEVHDEKIKALEVIIE---KANAAPIIVAYHFNSDLARLQKAFPQGR 92 A V + +K+ K A++ I+ + ++ +V H S L +A + + Sbjct: 303 ATETVMGLITRMFKQTAIAKAGAVKDYIKMMLQNDSLKFLVFAHHLSMLQACTEAVIENK 362 Query: 93 TL-----------DKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDL 141 T ++ Q + + + + G GL + +VF L+WD Sbjct: 363 TRYIRIDGSVPSSERIHLVNQFQKDPETRVAILSIQAAGQGLTFTAATH-VVFAELYWDP 421 Query: 142 EEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 +Q +R + G +V ++YLIA T+D L+ L K+ + LN K++ Sbjct: 422 GHIKQAEDR-----AHRIGQCSSVNIHYLIANGTLDTLMWGMLNRKAQVTGSTLNGRKEK 476 >gi|114581132|ref|XP_515805.2| PREDICTED: zinc finger, RAN-binding domain containing 3 [Pan troglodytes] Length = 977 Score = 72.7 bits (177), Expect = 3e-11, Method: Composition-based stats. Identities = 37/170 (21%), Positives = 67/170 (39%), Gaps = 21/170 (12%) Query: 49 KEVHDEKIKALEVIIE---KANAAPIIVAYHFNSDLARLQKAFPQGRTL----------- 94 K+ K A++ I+ + ++ +V H S L +A + +T Sbjct: 508 KQTAIAKAGAVKDYIKMMLQNDSLKFLVFAHHLSMLQACTEAVIENKTRYIRIDGSVSSS 567 Query: 95 DKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 ++ Q + + + G GL + +VF L+WD +Q +R Sbjct: 568 ERIHLVNQFQKDPDTRVAILSIQAAGQGLTFT-AASHVVFAELYWDPGHIKQAEDR---- 622 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIH 204 + G +V ++YLIA T+D L+ L K+ + LN +KE I Sbjct: 623 -AHRIGQCSSVNIHYLIANGTLDTLMWGMLNRKAQVTGSTLNG-RKEKIQ 670 >gi|228916862|ref|ZP_04080425.1| Uncharacterized ATP-dependent helicase yqhH [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] gi|228842785|gb|EEM87870.1| Uncharacterized ATP-dependent helicase yqhH [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] Length = 560 Score = 72.7 bits (177), Expect = 3e-11, Method: Composition-based stats. Identities = 30/163 (18%), Positives = 65/163 (39%), Gaps = 21/163 (12%) Query: 44 EEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQ-----GRTLDKDP 98 EK + K +I++ + +++ + + LQ Q Sbjct: 349 MEKINHIPFNSKANKALELIKEIDDK-VVIFTEYRASQMYLQWFLQQHGISSVPFRGGFK 407 Query: 99 CTIQEW------NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIG 152 ++W N ++ + G G+NLQ+ + ++ + L W+ +Q I RI Sbjct: 408 RGKKDWMKELFQNHAQV---LIATEAGGEGINLQF-CSHMINYDLPWNPMRLEQRIGRI- 462 Query: 153 VTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 + G K V +Y L ++T++E +L+ L K + + ++ Sbjct: 463 ----HRLGQKNDVHIYNLATKHTVEEHILKLLYEKINLFERVI 501 >gi|117646914|emb|CAL37572.1| hypothetical protein [synthetic construct] Length = 1077 Score = 72.7 bits (177), Expect = 3e-11, Method: Composition-based stats. Identities = 35/168 (20%), Positives = 66/168 (39%), Gaps = 20/168 (11%) Query: 49 KEVHDEKIKALEVIIE---KANAAPIIVAYHFNSDLARLQKAFPQGRTL----------- 94 K+ K A++ I+ + ++ +V H S L +A + +T Sbjct: 316 KQTAIAKAGAVKDYIKMMLQNDSLKFLVFAHHLSMLQACTEAVIENKTRYIRIDGSVSSS 375 Query: 95 DKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 ++ Q + + + G GL + +VF L+WD +Q +R Sbjct: 376 ERIHLVNQFQKDPDTRVAILSIQAAGQGLTFT-AASHVVFAELYWDPGHIKQAEDR---- 430 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKET 202 + G +V ++YLIA T+D L+ L K+ + LN K++ Sbjct: 431 -AHRIGQCSSVNIHYLIANGTLDTLMWGMLNRKAQVTGSTLNGRKEKI 477 >gi|297668526|ref|XP_002812483.1| PREDICTED: zinc finger Ran-binding domain-containing protein 3-like [Pongo abelii] Length = 1024 Score = 72.7 bits (177), Expect = 3e-11, Method: Composition-based stats. Identities = 35/168 (20%), Positives = 66/168 (39%), Gaps = 20/168 (11%) Query: 49 KEVHDEKIKALEVIIE---KANAAPIIVAYHFNSDLARLQKAFPQGRTL----------- 94 K+ K A++ I+ + ++ +V H S L +A + +T Sbjct: 261 KQTAIAKAGAVKDYIKMMLQNDSLKFLVFAHHLSMLQACTEAVIENKTRYIRIDGSVSSS 320 Query: 95 DKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 ++ Q + + + G GL + +VF L+WD +Q +R Sbjct: 321 ERIHLVNQFQKDPDTRVAILSIQAAGQGLTFT-AASHVVFAELYWDPGHIKQAEDR---- 375 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKET 202 + G +V ++YLIA T+D L+ L K+ + LN K++ Sbjct: 376 -AHRIGQCSSVNIHYLIANGTLDTLMWGMLNRKAQVTGSTLNGRKEKI 422 >gi|242066540|ref|XP_002454559.1| hypothetical protein SORBIDRAFT_04g033300 [Sorghum bicolor] gi|241934390|gb|EES07535.1| hypothetical protein SORBIDRAFT_04g033300 [Sorghum bicolor] Length = 1484 Score = 72.7 bits (177), Expect = 3e-11, Method: Composition-based stats. Identities = 27/152 (17%), Positives = 60/152 (39%), Gaps = 24/152 (15%) Query: 62 IIEKANAAPIIVAYHFNSDLARLQK------AFPQGRTL---------DKDPCTIQEWNE 106 + E N ++V + L+ + + + +G+ + ++ +N+ Sbjct: 1201 LCEALNER-VLVFSQYLGPLSLIMEQLKAKFNWAEGKEILLMSGKVPVKNRQTMMEVFND 1259 Query: 107 --GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA 164 K ++ A +C G+ L G + +V + W+ + R + R + G ++ Sbjct: 1260 MKSKAKVMLASTKACCEGITL-IGASRVVLLDVVWNPS-----VGRQAIGRAYRIGQEKI 1313 Query: 165 VFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 V+ Y LIAQ T ++ K + LL + Sbjct: 1314 VYTYNLIAQGTREKSKYDTQAKKEHMSKLLFS 1345 >gi|224000229|ref|XP_002289787.1| hypothetical protein THAPSDRAFT_268687 [Thalassiosira pseudonana CCMP1335] gi|220974995|gb|EED93324.1| hypothetical protein THAPSDRAFT_268687 [Thalassiosira pseudonana CCMP1335] Length = 446 Score = 72.7 bits (177), Expect = 3e-11, Method: Composition-based stats. Identities = 29/158 (18%), Positives = 52/158 (32%), Gaps = 19/158 (12%) Query: 54 EKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQKAFPQ----GRTL------DKDPCTI 101 K+ A + + I++ F +Q+ G L K I Sbjct: 268 AKMDATVALADSILKEEESIVIFSSFVDVAKGVQRCLQDRGWNGELLTGEVPSSKRQAMI 327 Query: 102 QEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGF 161 ++ G P+ + G GL L ++ W + Q +R+ R+ G Sbjct: 328 DDFQSGVSPVFVCTYGAGGVGLTLT-AACTVILIDRPWTPGDVNQAEDRV-----RRIGQ 381 Query: 162 KRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 R V ++ A IDE + L K ++ +K Sbjct: 382 TRPVRSIWIQAF-PIDEQIDALLDHKEVNSVTAVDGIK 418 >gi|196034943|ref|ZP_03102350.1| putative helicase [Bacillus cereus W] gi|195992482|gb|EDX56443.1| putative helicase [Bacillus cereus W] Length = 560 Score = 72.7 bits (177), Expect = 3e-11, Method: Composition-based stats. Identities = 29/163 (17%), Positives = 65/163 (39%), Gaps = 21/163 (12%) Query: 44 EEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQ-----GRTLDKDP 98 +K + K +I++ + +++ + + LQ Q Sbjct: 349 MDKINHIPFNSKANKALELIKEIDDK-VVIFTEYRASQMYLQWFLQQHGISSVPFRGGFK 407 Query: 99 CTIQEW------NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIG 152 ++W N ++ + G G+NLQ+ + ++ + L W+ +Q I RI Sbjct: 408 RGKKDWMKELFQNHAQV---LIATEAGGEGINLQF-CSHMINYDLPWNPMRLEQRIGRI- 462 Query: 153 VTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 + G K V +Y L ++T++E +L+ L K + + ++ Sbjct: 463 ----HRLGQKNDVHIYNLATKHTVEEHILKLLYEKINLFERVI 501 >gi|168008489|ref|XP_001756939.1| SWI/SNF class chromatin remodeling complex protein [Physcomitrella patens subsp. patens] gi|162691810|gb|EDQ78170.1| SWI/SNF class chromatin remodeling complex protein [Physcomitrella patens subsp. patens] Length = 2486 Score = 72.7 bits (177), Expect = 3e-11, Method: Composition-based stats. Identities = 32/169 (18%), Positives = 59/169 (34%), Gaps = 28/169 (16%) Query: 26 ASKTVKCLQL--ANGAVYYDEEKHWKEVHD------EKIKALEVIIEKAN--AAPIIVAY 75 A KC++L Y + + D K+ L+ I+ K + +++ Sbjct: 1448 APLQNKCMELRKVCNHPYLNYPPRYHIQGDMTVRTCGKLWILDRILVKLHKTGHRVLLFS 1507 Query: 76 HFNSDLARLQ----------KAFPQGRTLDKDPCTIQEWNEGK--IPLLFAHPASCGHGL 123 L L+ + TL+ I E+N + + G GL Sbjct: 1508 TMTRLLDILEDYLQWRRLIYRRIDGMTTLEARESAIVEFNRPDSDCFIFLLSIRAAGRGL 1567 Query: 124 NLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIA 172 NLQ + ++ + + + +Q + R + G KR V V Y+ A Sbjct: 1568 NLQT-ADTVIVYDPDPNPKNEEQAVAR-----AHRIGQKREVRVIYMEA 1610 >gi|149058725|gb|EDM09882.1| rCG46237 [Rattus norvegicus] Length = 716 Score = 72.7 bits (177), Expect = 3e-11, Method: Composition-based stats. Identities = 34/167 (20%), Positives = 65/167 (38%), Gaps = 20/167 (11%) Query: 49 KEVHDEKIKALEVIIE---KANAAPIIVAYHFNSDLARLQKAFPQGRTL----------- 94 K+ K A++ I+ + ++ +V H S L +A + + Sbjct: 316 KQTAIAKAGAVKDYIKMLLQNDSLKFLVFAHHLSMLQACTEAVIESKARYIRIDGSVPSS 375 Query: 95 DKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 ++ Q + + + G GL + +VF L+WD +Q +R Sbjct: 376 ERIHLVNQFQKDPDTRVAILSIQAAGQGLTFT-AASHVVFAELFWDPGHIKQAEDR---- 430 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 + G +V ++YLIA T+D L+ L K+ + LN K++ Sbjct: 431 -AHRIGQCSSVNIHYLIANGTLDSLMWAMLNRKAQVTGSTLNGRKEK 476 >gi|228935549|ref|ZP_04098365.1| Uncharacterized ATP-dependent helicase yqhH [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1] gi|228987419|ref|ZP_04147539.1| Uncharacterized ATP-dependent helicase yqhH [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] gi|229157827|ref|ZP_04285902.1| Uncharacterized ATP-dependent helicase yqhH [Bacillus cereus ATCC 4342] gi|228625784|gb|EEK82536.1| Uncharacterized ATP-dependent helicase yqhH [Bacillus cereus ATCC 4342] gi|228772391|gb|EEM20837.1| Uncharacterized ATP-dependent helicase yqhH [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] gi|228824087|gb|EEM69903.1| Uncharacterized ATP-dependent helicase yqhH [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1] Length = 560 Score = 72.7 bits (177), Expect = 3e-11, Method: Composition-based stats. Identities = 30/163 (18%), Positives = 65/163 (39%), Gaps = 21/163 (12%) Query: 44 EEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQ-----GRTLDKDP 98 EK + K +I++ + +++ + + LQ Q Sbjct: 349 MEKINHIPFNSKANKALELIKEIDDK-VVIFTEYRASQMYLQWFLQQHGISSVPFRGGFK 407 Query: 99 CTIQEW------NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIG 152 ++W N ++ + G G+NLQ+ + ++ + L W+ +Q I RI Sbjct: 408 RGKKDWMKELFQNHAQV---LIATEAGGEGINLQF-CSHMINYDLPWNPMRLEQRIGRI- 462 Query: 153 VTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 + G K V +Y L ++T++E +L+ L K + + ++ Sbjct: 463 ----HRLGQKNDVHIYNLATKHTVEEHILKLLYEKINLFERVI 501 >gi|228954512|ref|ZP_04116537.1| Uncharacterized ATP-dependent helicase yqhH [Bacillus thuringiensis serovar kurstaki str. T03a001] gi|228805169|gb|EEM51763.1| Uncharacterized ATP-dependent helicase yqhH [Bacillus thuringiensis serovar kurstaki str. T03a001] Length = 560 Score = 72.7 bits (177), Expect = 3e-11, Method: Composition-based stats. Identities = 29/163 (17%), Positives = 65/163 (39%), Gaps = 21/163 (12%) Query: 44 EEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQ-----GRTLDKDP 98 +K + K +I++ + +++ + + LQ Q Sbjct: 349 MDKINHIPFNSKANKALELIKEIDDK-VVIFTEYRASQMYLQWFLQQHGISSVPFRGGFK 407 Query: 99 CTIQEW------NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIG 152 ++W N ++ + G G+NLQ+ + ++ + L W+ +Q I RI Sbjct: 408 RGKKDWMKELFQNHAQV---LIATEAGGEGINLQF-CSHMINYDLPWNPMRLEQRIGRI- 462 Query: 153 VTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 + G K V +Y L ++T++E +L+ L K + + ++ Sbjct: 463 ----HRLGQKNDVHIYNLATKHTVEEHILKLLYEKINLFERVI 501 >gi|154305729|ref|XP_001553266.1| hypothetical protein BC1G_07679 [Botryotinia fuckeliana B05.10] gi|150853198|gb|EDN28390.1| hypothetical protein BC1G_07679 [Botryotinia fuckeliana B05.10] Length = 537 Score = 72.7 bits (177), Expect = 3e-11, Method: Composition-based stats. Identities = 28/181 (15%), Positives = 58/181 (32%), Gaps = 21/181 (11%) Query: 23 FNSASKTVKCLQLANGAVYYDEEKHWKEVHDE-KIKALEVII-----EKANAAPIIVAYH 76 FN S + + N + V ++ A + E+ P Sbjct: 349 FNGLSLLNRLRLICNHGILQLTSTTDHVVSQGIEVVACCSMCGDYLQEEVFGGPFPSGIR 408 Query: 77 FNSDLARLQKAFPQGRTLDKDPCTIQEW-NEGKIPLLFAHPASCGHGLNLQYGGNILVFF 135 + R+ P L + + + NE + ++ G GL+L G + Sbjct: 409 YT----RIDGTMP----LSRRNEALGAFKNEDTVRVILVSVTCGGAGLDLTTG-SRAYLL 459 Query: 136 SLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 W+ +Q + R + KR V + N+ +E +++ + K + D Sbjct: 460 EPHWNPMIEEQA-----LCRVHRISQKRKVTTIRYLMHNSFEEQIVELQKRKKMLADATF 514 Query: 196 N 196 + Sbjct: 515 S 515 >gi|30022310|ref|NP_833941.1| SNF2 family DNA/RNA helicase [Bacillus cereus ATCC 14579] gi|206971150|ref|ZP_03232101.1| putative helicase [Bacillus cereus AH1134] gi|218232045|ref|YP_002369033.1| putative helicase [Bacillus cereus B4264] gi|228910061|ref|ZP_04073881.1| Uncharacterized ATP-dependent helicase yqhH [Bacillus thuringiensis IBL 200] gi|228922980|ref|ZP_04086273.1| Uncharacterized ATP-dependent helicase yqhH [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] gi|229071731|ref|ZP_04204946.1| Uncharacterized ATP-dependent helicase yqhH [Bacillus cereus F65185] gi|229081486|ref|ZP_04213985.1| Uncharacterized ATP-dependent helicase yqhH [Bacillus cereus Rock4-2] gi|229129507|ref|ZP_04258478.1| Uncharacterized ATP-dependent helicase yqhH [Bacillus cereus BDRD-Cer4] gi|229152428|ref|ZP_04280620.1| Uncharacterized ATP-dependent helicase yqhH [Bacillus cereus m1550] gi|229180505|ref|ZP_04307847.1| Uncharacterized ATP-dependent helicase yqhH [Bacillus cereus 172560W] gi|29897867|gb|AAP11142.1| Superfamily II DNA/RNA helicases, SNF2 family [Bacillus cereus ATCC 14579] gi|206733922|gb|EDZ51093.1| putative helicase [Bacillus cereus AH1134] gi|218160002|gb|ACK59994.1| putative helicase [Bacillus cereus B4264] gi|228602929|gb|EEK60408.1| Uncharacterized ATP-dependent helicase yqhH [Bacillus cereus 172560W] gi|228631036|gb|EEK87673.1| Uncharacterized ATP-dependent helicase yqhH [Bacillus cereus m1550] gi|228654112|gb|EEL09979.1| Uncharacterized ATP-dependent helicase yqhH [Bacillus cereus BDRD-Cer4] gi|228701793|gb|EEL54280.1| Uncharacterized ATP-dependent helicase yqhH [Bacillus cereus Rock4-2] gi|228711326|gb|EEL63286.1| Uncharacterized ATP-dependent helicase yqhH [Bacillus cereus F65185] gi|228836613|gb|EEM81961.1| Uncharacterized ATP-dependent helicase yqhH [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] gi|228849578|gb|EEM94412.1| Uncharacterized ATP-dependent helicase yqhH [Bacillus thuringiensis IBL 200] Length = 560 Score = 72.7 bits (177), Expect = 3e-11, Method: Composition-based stats. Identities = 29/163 (17%), Positives = 65/163 (39%), Gaps = 21/163 (12%) Query: 44 EEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQ-----GRTLDKDP 98 +K + K +I++ + +++ + + LQ Q Sbjct: 349 MDKINHIPFNSKANKALELIKEIDDK-VVIFTEYRASQMYLQWFLQQHGISSVPFRGGFK 407 Query: 99 CTIQEW------NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIG 152 ++W N ++ + G G+NLQ+ + ++ + L W+ +Q I RI Sbjct: 408 RGKKDWMKELFQNHAQV---LIATEAGGEGINLQF-CSHMINYDLPWNPMRLEQRIGRI- 462 Query: 153 VTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 + G K V +Y L ++T++E +L+ L K + + ++ Sbjct: 463 ----HRLGQKNDVHIYNLATKHTVEEHILKLLYEKINLFERVI 501 >gi|47567784|ref|ZP_00238492.1| helicase/SNF2 family domain protein [Bacillus cereus G9241] gi|47555461|gb|EAL13804.1| helicase/SNF2 family domain protein [Bacillus cereus G9241] Length = 560 Score = 72.7 bits (177), Expect = 3e-11, Method: Composition-based stats. Identities = 30/163 (18%), Positives = 65/163 (39%), Gaps = 21/163 (12%) Query: 44 EEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQ-----GRTLDKDP 98 EK + K +I++ + +++ + + LQ Q Sbjct: 349 MEKINHIPFNSKANKALELIKEIDDK-VVIFTEYRASQMYLQWFLQQHGISSVPFRGGFK 407 Query: 99 CTIQEW------NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIG 152 ++W N ++ + G G+NLQ+ + ++ + L W+ +Q I RI Sbjct: 408 RGKKDWMKELFQNHAQV---LIATEAGGEGINLQF-CSHMINYDLPWNPMRLEQRIGRI- 462 Query: 153 VTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 + G K V +Y L ++T++E +L+ L K + + ++ Sbjct: 463 ----HRLGQKNDVHIYNLATKHTVEEHILKLLYEKINLFERVI 501 >gi|189239152|ref|XP_971094.2| PREDICTED: similar to Transcriptional regulator ATRX homolog (ATP-dependent helicase XNP) (X-linked nuclear protein) (dXNP) (d-xnp) [Tribolium castaneum] Length = 1220 Score = 72.7 bits (177), Expect = 3e-11, Method: Composition-based stats. Identities = 30/164 (18%), Positives = 60/164 (36%), Gaps = 24/164 (14%) Query: 53 DEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQKAFPQGR----------------TL 94 KIK + II + N +++ + +L ++ Q R Sbjct: 952 STKIKLILDIISECMRNNEKVLIFGQYLVELDIVEHFLKQFRNWRPNVDYYRMDGDTSVE 1011 Query: 95 DKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 ++D + + + G GLNL G N ++ + Q + Sbjct: 1012 NRDILCKKFNSNPTSKVFLLTHKVGGLGLNLT-GANRVILIGSNHNPSHDSQ-----SLY 1065 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNAL 198 R + G +R +VY L++ T++E + R K +I +++ L Sbjct: 1066 RVYRFGQERKCYVYRLVSLGTMEEKIYHRCVLKLSISGTVVDKL 1109 >gi|169146048|emb|CAQ14040.1| novel protein similar to vertebrate SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1 (SMARCAD1, zgc:113183) [Danio rerio] Length = 972 Score = 72.7 bits (177), Expect = 3e-11, Method: Composition-based stats. Identities = 26/144 (18%), Positives = 56/144 (38%), Gaps = 18/144 (12%) Query: 65 KANAAPIIVAYHFNSDLARLQKAFP-----QGRTLDKDPCT-----IQEWN-EGKIPLLF 113 K +++ F L ++ R P I ++N +I + Sbjct: 814 KEKGDRVVLFSQFTMMLDIVEILLKHLDHQYVRLDGSTPMAERIGLIDKYNTNPEIFVFL 873 Query: 114 AHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQ 173 + G G+NL N ++ + + +Q +R + G R V V LI++ Sbjct: 874 LSTRAGGQGINL-ASANTVILHDIDCNPFNDKQAEDRC-----HRMGQTRTVQVIKLISK 927 Query: 174 NTIDELVLQRLRTKSTI-QDLLLN 196 ++I++ +L+ + K + QD+ + Sbjct: 928 DSIEDCMLRVGQEKLKLEQDMTTD 951 >gi|145477881|ref|XP_001424963.1| hypothetical protein [Paramecium tetraurelia strain d4-2] gi|124392030|emb|CAK57565.1| unnamed protein product [Paramecium tetraurelia] Length = 1215 Score = 72.7 bits (177), Expect = 3e-11, Method: Composition-based stats. Identities = 29/149 (19%), Positives = 54/149 (36%), Gaps = 19/149 (12%) Query: 53 DEKIKAL--EVIIEKANAAPIIVAYHFNSDLARLQKAFPQGR----------TLDKDPCT 100 K++A+ E + K +++ + + L+ F T+DK Sbjct: 1046 SSKLEAVIKETKVIKQKKEKVLIFTQWIEMIGLLENQFKDSGIIAYRITGSMTVDKREKI 1105 Query: 101 IQEWNEG-KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQA 159 I+ + E + L + GLNL N + WW+ Q I R + Sbjct: 1106 IKNFKEQQDVTALILSLRATSTGLNLTMASN-VFLVDPWWNPAIEDQAIGR-----ADRI 1159 Query: 160 GFKRAVFVYYLIAQNTIDELVLQRLRTKS 188 G + V V + +NTI++ + + K Sbjct: 1160 GQQNQVKVVRFLCRNTIEQQINLLHQKKK 1188 >gi|322504140|emb|CAM36456.2| putative DNA excision/repair protein SNF2 [Leishmania braziliensis MHOM/BR/75/M2904] Length = 731 Score = 72.7 bits (177), Expect = 3e-11, Method: Composition-based stats. Identities = 26/146 (17%), Positives = 50/146 (34%), Gaps = 18/146 (12%) Query: 58 ALEVIIEK-ANAAPIIVAYHFNSDLA---------RLQKAFPQGRTL-DKDPCTIQEWN- 105 AL++I+ + +V L RL G T ++ + +N Sbjct: 372 ALQLILRCVSERRKTLVFSRSKRLLHLLSFLLREWRLTHTQVDGGTPSERRCAEVDRFNS 431 Query: 106 EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 + + G GL + +V W+ Q ++R+ + G +R V Sbjct: 432 NAGVWVCLLTTQVGGVGLTF-SAASAVVLLDPSWNPSADAQAVDRV-----HRIGQQRNV 485 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQ 191 V+ L+ T++E V + K Sbjct: 486 VVFRLVTCGTVEEKVYRNQIFKRMAA 511 >gi|312104297|ref|XP_003150368.1| hypothetical protein LOAG_14827 [Loa loa] gi|307754467|gb|EFO13701.1| hypothetical protein LOAG_14827 [Loa loa] Length = 156 Score = 72.7 bits (177), Expect = 3e-11, Method: Composition-based stats. Identities = 24/97 (24%), Positives = 43/97 (44%), Gaps = 6/97 (6%) Query: 94 LDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGV 153 +D + + + G G+NL +I+VF L W+ +Q +R Sbjct: 23 RSRDEQCRLFQENDDVMVAVLSITAAGIGVNLT-AASIVVFAELHWNPGTLKQAEDR--- 78 Query: 154 TRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 + G K +VFV YLIA+ T D+++ ++ K + Sbjct: 79 --AHRLGQKDSVFVQYLIAKGTADDVLWPLIQKKLDV 113 >gi|229192438|ref|ZP_04319401.1| Uncharacterized ATP-dependent helicase yqhH [Bacillus cereus ATCC 10876] gi|228591015|gb|EEK48871.1| Uncharacterized ATP-dependent helicase yqhH [Bacillus cereus ATCC 10876] Length = 545 Score = 72.7 bits (177), Expect = 3e-11, Method: Composition-based stats. Identities = 29/163 (17%), Positives = 65/163 (39%), Gaps = 21/163 (12%) Query: 44 EEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQ-----GRTLDKDP 98 +K + K +I++ + +++ + + LQ Q Sbjct: 334 MDKINHIPFNSKANKALELIKEIDDK-VVIFTEYRASQMYLQWFLQQHGISSVPFRGGFK 392 Query: 99 CTIQEW------NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIG 152 ++W N ++ + G G+NLQ+ + ++ + L W+ +Q I RI Sbjct: 393 RGKKDWMKELFQNHAQV---LIATEAGGEGINLQF-CSHMINYDLPWNPMRLEQRIGRI- 447 Query: 153 VTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 + G K V +Y L ++T++E +L+ L K + + ++ Sbjct: 448 ----HRLGQKNDVHIYNLATKHTVEEHILKLLYEKINLFERVI 486 >gi|167860150|ref|NP_001018610.2| SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1 [Danio rerio] Length = 972 Score = 72.7 bits (177), Expect = 3e-11, Method: Composition-based stats. Identities = 26/144 (18%), Positives = 56/144 (38%), Gaps = 18/144 (12%) Query: 65 KANAAPIIVAYHFNSDLARLQKAFP-----QGRTLDKDPCT-----IQEWN-EGKIPLLF 113 K +++ F L ++ R P I ++N +I + Sbjct: 814 KEKGDRVVLFSQFTMMLDIVEILLKHLDHQYVRLDGSTPMAERIGLIDKYNTNPEIFVFL 873 Query: 114 AHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQ 173 + G G+NL N ++ + + +Q +R + G R V V LI++ Sbjct: 874 LSTRAGGQGINL-ASANTVILHDIDCNPFNDKQAEDRC-----HRMGQTRTVQVIKLISK 927 Query: 174 NTIDELVLQRLRTKSTI-QDLLLN 196 ++I++ +L+ + K + QD+ + Sbjct: 928 DSIEDCMLRVGQEKLKLEQDMTTD 951 >gi|154331301|ref|XP_001561469.1| DNA excision/repair protein SNF2 [Leishmania braziliensis MHOM/BR/75/M2904] Length = 731 Score = 72.7 bits (177), Expect = 3e-11, Method: Composition-based stats. Identities = 26/146 (17%), Positives = 50/146 (34%), Gaps = 18/146 (12%) Query: 58 ALEVIIEK-ANAAPIIVAYHFNSDLA---------RLQKAFPQGRTL-DKDPCTIQEWN- 105 AL++I+ + +V L RL G T ++ + +N Sbjct: 372 ALQLILRCVSERRKTLVFSRSKRLLHLLSFLLREWRLTHTQVDGGTPSERRCAEVDRFNS 431 Query: 106 EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 + + G GL + +V W+ Q ++R+ + G +R V Sbjct: 432 NAGVWVCLLTTQVGGVGLTF-SAASAVVLLDPSWNPSADAQAVDRV-----HRIGQQRNV 485 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQ 191 V+ L+ T++E V + K Sbjct: 486 VVFRLVTCGTVEEKVYRNQIFKRMAA 511 >gi|119632034|gb|EAX11629.1| zinc finger, RAN-binding domain containing 3, isoform CRA_a [Homo sapiens] Length = 1030 Score = 72.7 bits (177), Expect = 3e-11, Method: Composition-based stats. Identities = 35/168 (20%), Positives = 66/168 (39%), Gaps = 20/168 (11%) Query: 49 KEVHDEKIKALEVIIE---KANAAPIIVAYHFNSDLARLQKAFPQGRTL----------- 94 K+ K A++ I+ + ++ +V H S L +A + +T Sbjct: 261 KQTAIAKAGAVKDYIKMMLQNDSLKFLVFAHHLSMLQACTEAVIENKTRYIRIDGSVSSS 320 Query: 95 DKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 ++ Q + + + G GL + +VF L+WD +Q +R Sbjct: 321 ERIHLVNQFQKDPDTRVAILSIQAAGQGLTFT-AASHVVFAELYWDPGHIKQAEDR---- 375 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKET 202 + G +V ++YLIA T+D L+ L K+ + LN K++ Sbjct: 376 -AHRIGQCSSVNIHYLIANGTLDTLMWGMLNRKAQVTGSTLNGRKEKI 422 >gi|119632036|gb|EAX11631.1| zinc finger, RAN-binding domain containing 3, isoform CRA_c [Homo sapiens] gi|119632038|gb|EAX11633.1| zinc finger, RAN-binding domain containing 3, isoform CRA_c [Homo sapiens] Length = 1019 Score = 72.7 bits (177), Expect = 3e-11, Method: Composition-based stats. Identities = 35/168 (20%), Positives = 66/168 (39%), Gaps = 20/168 (11%) Query: 49 KEVHDEKIKALEVIIE---KANAAPIIVAYHFNSDLARLQKAFPQGRTL----------- 94 K+ K A++ I+ + ++ +V H S L +A + +T Sbjct: 256 KQTAIAKAGAVKDYIKMMLQNDSLKFLVFAHHLSMLQACTEAVIENKTRYIRIDGSVSSS 315 Query: 95 DKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 ++ Q + + + G GL + +VF L+WD +Q +R Sbjct: 316 ERIHLVNQFQKDPDTRVAILSIQAAGQGLTFT-AASHVVFAELYWDPGHIKQAEDR---- 370 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKET 202 + G +V ++YLIA T+D L+ L K+ + LN K++ Sbjct: 371 -AHRIGQCSSVNIHYLIANGTLDTLMWGMLNRKAQVTGSTLNGRKEKI 417 >gi|109104419|ref|XP_001101449.1| PREDICTED: zinc finger Ran-binding domain-containing protein 3-like, partial [Macaca mulatta] Length = 958 Score = 72.7 bits (177), Expect = 3e-11, Method: Composition-based stats. Identities = 35/168 (20%), Positives = 66/168 (39%), Gaps = 20/168 (11%) Query: 49 KEVHDEKIKALEVIIE---KANAAPIIVAYHFNSDLARLQKAFPQGRTL----------- 94 K+ K A++ I+ + ++ +V H S L +A + +T Sbjct: 196 KQTAIAKAGAVKDYIKMMLQNDSLKFLVFAHHLSMLQACTEAVIENKTRYIRIDGGVSSS 255 Query: 95 DKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 ++ Q + + + G GL + +VF L+WD +Q +R Sbjct: 256 ERIHLVNQFQKDPDTRVAILSIQAAGQGLTFT-AASHVVFAELYWDPGHIKQAEDR---- 310 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKET 202 + G +V ++YLIA T+D L+ L K+ + LN K++ Sbjct: 311 -AHRIGQCSSVNIHYLIANGTLDTLMWGMLNRKAQVTGSTLNGRKEKI 357 >gi|325094197|gb|EGC47507.1| DNA repair helicase rad5,16 [Ajellomyces capsulatus H88] Length = 1113 Score = 72.7 bits (177), Expect = 3e-11, Method: Composition-based stats. Identities = 40/203 (19%), Positives = 74/203 (36%), Gaps = 27/203 (13%) Query: 14 DLQGENIEAFNSASKTVKCLQLANGAV-YYDEEKHW-----KEVHDEKIKA----LEVII 63 L+G + NS K+ K V +E+ +W + K+ A L Sbjct: 735 QLEGNPVGMVNSHKKSRKKTDRKGSEVESSNEDMNWVACVGHLMPGAKLTAISSCLVNWF 794 Query: 64 EKANAAPIIVAYHFNSDLARLQKAFPQGR----------TLDKDPCTIQEW-NEGKIPLL 112 + + +++ F L + R + + +I+E+ + I +L Sbjct: 795 KNSVETKVVIFTQFLGMAHVLGSMCQENRWGHLSLTGKMPIRQREKSIEEFSKDPAIRIL 854 Query: 113 FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIA 172 + G GL+L N + LWW+ QQ R+ + KR V ++ Sbjct: 855 VCSLRTAGTGLDLT-AANKCILVDLWWNEAIEQQAFFRLF-----RINQKRKVEFVRVVV 908 Query: 173 QNTIDELVLQRLRTKSTIQDLLL 195 +N+ID+ + KS D +L Sbjct: 909 RNSIDDRLQLIQEDKSNNIDRVL 931 >gi|119632040|gb|EAX11635.1| zinc finger, RAN-binding domain containing 3, isoform CRA_f [Homo sapiens] Length = 1017 Score = 72.7 bits (177), Expect = 3e-11, Method: Composition-based stats. Identities = 35/168 (20%), Positives = 66/168 (39%), Gaps = 20/168 (11%) Query: 49 KEVHDEKIKALEVIIE---KANAAPIIVAYHFNSDLARLQKAFPQGRTL----------- 94 K+ K A++ I+ + ++ +V H S L +A + +T Sbjct: 256 KQTAIAKAGAVKDYIKMMLQNDSLKFLVFAHHLSMLQACTEAVIENKTRYIRIDGSVSSS 315 Query: 95 DKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 ++ Q + + + G GL + +VF L+WD +Q +R Sbjct: 316 ERIHLVNQFQKDPDTRVAILSIQAAGQGLTFT-AASHVVFAELYWDPGHIKQAEDR---- 370 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKET 202 + G +V ++YLIA T+D L+ L K+ + LN K++ Sbjct: 371 -AHRIGQCSSVNIHYLIANGTLDTLMWGMLNRKAQVTGSTLNGRKEKI 417 >gi|3702343|gb|AAC62900.1| putative SNF2 subfamily transcriptional activator [Arabidopsis thaliana] Length = 1245 Score = 72.7 bits (177), Expect = 3e-11, Method: Composition-based stats. Identities = 34/182 (18%), Positives = 67/182 (36%), Gaps = 35/182 (19%) Query: 27 SKTVKCLQL---ANGAV----YYDEEKHWKEVHDE-KIKALEVIIEKAN--AAPIIVAYH 76 + +C++L N + Y+++ V K+ L+ I+ K +++ Sbjct: 325 TLNNRCMELRKACNHPLLNYPYFNDFSKDFLVRSCGKLWILDRILIKLQRTGHRVLLFST 384 Query: 77 FNSDLA---------RLQKAFPQGRT-LDKDPCTIQEWNEGKIP--LLFAHPASCGHGLN 124 L RL G T L+ I ++N+ + + G GLN Sbjct: 385 MTKLLDILEEYLQWRRLVYRRIDGTTSLEDRESAIVDFNDPDTDCFIFLLSIRAAGRGLN 444 Query: 125 LQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRL 184 LQ + +V + + + +Q + R + G R V V Y+ E V+++L Sbjct: 445 LQT-ADTVVIYDPDPNPKNEEQAVAR-----AHRIGQTREVKVIYM-------EAVVEKL 491 Query: 185 RT 186 + Sbjct: 492 SS 493 >gi|146074911|ref|XP_001462637.1| DNA excision/repair protein SNF2 [Leishmania infantum JPCM5] Length = 699 Score = 72.7 bits (177), Expect = 3e-11, Method: Composition-based stats. Identities = 24/145 (16%), Positives = 49/145 (33%), Gaps = 20/145 (13%) Query: 66 ANAAPIIVAYHFNSDLARLQKAFPQGRTL----------DKDPCTIQEWNEGK-IPLLFA 114 + +V L L + R ++ ++ +N + + Sbjct: 347 SEQRKTLVFSRSRRFLHLLSFLLQEWRLTHTQVDGNTPSERRCAEVERFNNDAGVWVCLL 406 Query: 115 HPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQN 174 G GL + +V + W+ Q I+R+ + G +R V V+ L+ Sbjct: 407 TTQVGGVGLTF-NAASAVVLLDISWNPSADAQAIDRV-----HRIGQRRDVVVFRLVTCG 460 Query: 175 TIDELVLQRLRTKSTIQDLLLNALK 199 T++E V + K L ++K Sbjct: 461 TVEEKVYRNQIFKRMAA---LQSMK 482 >gi|26351357|dbj|BAC39315.1| unnamed protein product [Mus musculus] Length = 616 Score = 72.7 bits (177), Expect = 3e-11, Method: Composition-based stats. Identities = 34/167 (20%), Positives = 66/167 (39%), Gaps = 20/167 (11%) Query: 49 KEVHDEKIKALEVIIE---KANAAPIIVAYHFNSDLARLQKAFPQGRTL----------- 94 K+ K A++ I+ + ++ +V H S L +A + ++ Sbjct: 316 KQTAIAKAGAVKDYIKMLLQNDSLKFLVFAHHLSMLQACTEAVIESKSRYIRIDGSVPSS 375 Query: 95 DKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 ++ Q + + + G GL + +VF L+WD +Q +R Sbjct: 376 ERIHLVNQFQKDPDTRVAILSIQAAGQGLTFT-AASHVVFAELYWDPGHIKQAEDR---- 430 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 + G +V ++YLIA T+D L+ L K+ + LN K++ Sbjct: 431 -AHRIGQCSSVNIHYLIANGTLDSLMWAMLNRKAQVTGSTLNGRKEK 476 >gi|312219363|emb|CBX99307.1| similar to SNF2 family helicase/ATPase [Leptosphaeria maculans] Length = 1120 Score = 72.7 bits (177), Expect = 3e-11, Method: Composition-based stats. Identities = 25/170 (14%), Positives = 55/170 (32%), Gaps = 23/170 (13%) Query: 48 WKEVHDEKIKALEVIIEKANAAP------IIVAYHFNSDLARLQ-----KAFPQGRTLDK 96 + L+ E + P IV + + L ++ R + Sbjct: 939 PHTKTQALLNDLKEFHEWSENNPHERPIKSIVFSSWTTHLDLIEIALQAHNHTYVRLDGR 998 Query: 97 DPCTIQE------WNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 ++ + + ++ + G GLNL N + ++ Q ++R Sbjct: 999 MSRDARDKSMQRLREDPSVRVMLVSIGAGGLGLNLTT-ANKVFMMEPQFNPAAEAQAVDR 1057 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKK 200 + + G R V + I + +E +L + K + DL + +K Sbjct: 1058 V-----HRLGQDRDVTIKRFIMDKSFEEKMLVMQKKKKDLADLTMARERK 1102 >gi|302135049|ref|ZP_07261039.1| SNF2-related:helicase, C-terminal [Pseudomonas syringae pv. tomato NCPPB 1108] Length = 650 Score = 72.7 bits (177), Expect = 3e-11, Method: Composition-based stats. Identities = 28/164 (17%), Positives = 59/164 (35%), Gaps = 18/164 (10%) Query: 45 EKHWKEVHDEKIKALEVIIEKAN-AAPIIVAYHFNSDLARLQKAFPQGRT---------- 93 + + K++ + ++ + + +I+ + +A L++ + Sbjct: 478 GGLRQLLERVKVRIVSDLMAELDVDDKVILFCEYQESVATLREHCLKMGIGCVTLVGSDS 537 Query: 94 LDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIG 152 K I + + + ++ G G NL N + F L W Q +R Sbjct: 538 PKKRQKAIDAFQQDPDCRVFIGTRSAAGTGYNLT-AANYVFFLGLPWTPGLQDQAEDR-- 594 Query: 153 VTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + G R V V +A +TID+ + Q L K + L++ Sbjct: 595 ---AYRNGQLRMVVVKIPLADDTIDQQLWQMLMDKRALASDLID 635 >gi|229047922|ref|ZP_04193498.1| Uncharacterized ATP-dependent helicase yqhH [Bacillus cereus AH676] gi|228723379|gb|EEL74748.1| Uncharacterized ATP-dependent helicase yqhH [Bacillus cereus AH676] Length = 560 Score = 72.7 bits (177), Expect = 3e-11, Method: Composition-based stats. Identities = 32/158 (20%), Positives = 66/158 (41%), Gaps = 22/158 (13%) Query: 49 KEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQ-----GRTLDKDPCTIQE 103 + + KALE+I E + +++ + + LQ Q ++ Sbjct: 355 IPFNSKATKALELIKEIDD--KVVIFTEYRASQMYLQWFLQQHGISSVPFRGGFKRGKKD 412 Query: 104 W------NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 W N ++ + G G+NLQ+ + ++ + L W+ +Q I RI Sbjct: 413 WMKELFQNRAQV---LIATEAGGEGINLQF-CSHMINYDLPWNPMRLEQRIGRI-----H 463 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 + G K V +Y L ++T++E +L+ L K + + ++ Sbjct: 464 RLGQKNDVHIYNLATKHTVEEHILKLLYEKINLFERVI 501 >gi|218899388|ref|YP_002447799.1| putative helicase [Bacillus cereus G9842] gi|218544732|gb|ACK97126.1| putative helicase [Bacillus cereus G9842] Length = 560 Score = 72.7 bits (177), Expect = 3e-11, Method: Composition-based stats. Identities = 32/158 (20%), Positives = 66/158 (41%), Gaps = 22/158 (13%) Query: 49 KEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQ-----GRTLDKDPCTIQE 103 + + KALE+I E + +++ + + LQ Q ++ Sbjct: 355 IPFNSKATKALELIKEIDD--KVVIFTEYRASQMYLQWFLQQHGISSVPFRGGFKRGKKD 412 Query: 104 W------NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 W N ++ + G G+NLQ+ + ++ + L W+ +Q I RI Sbjct: 413 WMKELFQNRAQV---LIATEAGGEGINLQF-CSHMINYDLPWNPMRLEQRIGRI-----H 463 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 + G K V +Y L ++T++E +L+ L K + + ++ Sbjct: 464 RLGQKNDVHIYNLATKHTVEEHILKLLYEKINLFERVI 501 >gi|228941387|ref|ZP_04103939.1| Uncharacterized ATP-dependent helicase yqhH [Bacillus thuringiensis serovar berliner ATCC 10792] gi|228974320|ref|ZP_04134889.1| Uncharacterized ATP-dependent helicase yqhH [Bacillus thuringiensis serovar thuringiensis str. T01001] gi|228980912|ref|ZP_04141216.1| Uncharacterized ATP-dependent helicase yqhH [Bacillus thuringiensis Bt407] gi|228778848|gb|EEM27111.1| Uncharacterized ATP-dependent helicase yqhH [Bacillus thuringiensis Bt407] gi|228785370|gb|EEM33380.1| Uncharacterized ATP-dependent helicase yqhH [Bacillus thuringiensis serovar thuringiensis str. T01001] gi|228818313|gb|EEM64386.1| Uncharacterized ATP-dependent helicase yqhH [Bacillus thuringiensis serovar berliner ATCC 10792] gi|326942008|gb|AEA17904.1| SNF2 family DNA/RNA helicase [Bacillus thuringiensis serovar chinensis CT-43] Length = 560 Score = 72.7 bits (177), Expect = 3e-11, Method: Composition-based stats. Identities = 32/158 (20%), Positives = 66/158 (41%), Gaps = 22/158 (13%) Query: 49 KEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQ-----GRTLDKDPCTIQE 103 + + KALE+I E + +++ + + LQ Q ++ Sbjct: 355 IPFNSKATKALELIKEIDD--KVVIFTEYRASQMYLQWFLQQHGISSVPFRGGFKRGKKD 412 Query: 104 W------NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 W N ++ + G G+NLQ+ + ++ + L W+ +Q I RI Sbjct: 413 WMKELFQNRAQV---LIATEAGGEGINLQF-CSHMINYDLPWNPMRLEQRIGRI-----H 463 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 + G K V +Y L ++T++E +L+ L K + + ++ Sbjct: 464 RLGQKNDVHIYNLATKHTVEEHILKLLYEKINLFERVI 501 >gi|228960494|ref|ZP_04122144.1| Uncharacterized ATP-dependent helicase yqhH [Bacillus thuringiensis serovar pakistani str. T13001] gi|228967268|ref|ZP_04128304.1| Uncharacterized ATP-dependent helicase yqhH [Bacillus thuringiensis serovar sotto str. T04001] gi|229111701|ref|ZP_04241249.1| Uncharacterized ATP-dependent helicase yqhH [Bacillus cereus Rock1-15] gi|296504708|ref|YP_003666408.1| SNF2 family DNA/RNA helicase [Bacillus thuringiensis BMB171] gi|228671695|gb|EEL26991.1| Uncharacterized ATP-dependent helicase yqhH [Bacillus cereus Rock1-15] gi|228792637|gb|EEM40203.1| Uncharacterized ATP-dependent helicase yqhH [Bacillus thuringiensis serovar sotto str. T04001] gi|228799191|gb|EEM46158.1| Uncharacterized ATP-dependent helicase yqhH [Bacillus thuringiensis serovar pakistani str. T13001] gi|296325760|gb|ADH08688.1| SNF2 family DNA/RNA helicase [Bacillus thuringiensis BMB171] Length = 560 Score = 72.7 bits (177), Expect = 3e-11, Method: Composition-based stats. Identities = 32/158 (20%), Positives = 66/158 (41%), Gaps = 22/158 (13%) Query: 49 KEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQ-----GRTLDKDPCTIQE 103 + + KALE+I E + +++ + + LQ Q ++ Sbjct: 355 IPFNSKATKALELIKEIDD--KVVIFTEYRASQMYLQWFLQQHGISSVPFRGGFKRGKKD 412 Query: 104 W------NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 W N ++ + G G+NLQ+ + ++ + L W+ +Q I RI Sbjct: 413 WMKELFQNRAQV---LIATEAGGEGINLQF-CSHMINYDLPWNPMRLEQRIGRI-----H 463 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 + G K V +Y L ++T++E +L+ L K + + ++ Sbjct: 464 RLGQKNDVHIYNLATKHTVEEHILKLLYEKINLFERVI 501 >gi|229146796|ref|ZP_04275161.1| Uncharacterized ATP-dependent helicase yqhH [Bacillus cereus BDRD-ST24] gi|228636624|gb|EEK93089.1| Uncharacterized ATP-dependent helicase yqhH [Bacillus cereus BDRD-ST24] Length = 560 Score = 72.7 bits (177), Expect = 3e-11, Method: Composition-based stats. Identities = 32/158 (20%), Positives = 66/158 (41%), Gaps = 22/158 (13%) Query: 49 KEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQ-----GRTLDKDPCTIQE 103 + + KALE+I E + +++ + + LQ Q ++ Sbjct: 355 IPFNSKATKALELIKEIDD--KVVIFTEYRASQMYLQWFLQQHGISSVPFRGGFKRGKKD 412 Query: 104 W------NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 W N ++ + G G+NLQ+ + ++ + L W+ +Q I RI Sbjct: 413 WMKEIFQNRAQV---LIATEAGGEGINLQF-CSHMINYDLPWNPMRLEQRIGRI-----H 463 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 + G K V +Y L ++T++E +L+ L K + + ++ Sbjct: 464 RLGQKNDVHIYNLATKHTVEEHILKLLYEKINLFERVI 501 >gi|193785976|dbj|BAG54763.1| unnamed protein product [Homo sapiens] Length = 827 Score = 72.7 bits (177), Expect = 3e-11, Method: Composition-based stats. Identities = 35/168 (20%), Positives = 66/168 (39%), Gaps = 20/168 (11%) Query: 49 KEVHDEKIKALEVIIE---KANAAPIIVAYHFNSDLARLQKAFPQGRTL----------- 94 K+ K A++ I+ + ++ +V H S L +A + +T Sbjct: 64 KQTAIAKAGAVKDYIKMMLQNDSLKFLVFAHHLSMLQACTEAVIENKTRYIRIDGSVSSS 123 Query: 95 DKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 ++ Q + + + G GL + +VF L+WD +Q +R Sbjct: 124 ERIHLVNQFQKDPDTRVAILSIQAAGQGLTFT-AASHVVFAELYWDPGHIKQAEDR---- 178 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKET 202 + G +V ++YLIA T+D L+ L K+ + LN K++ Sbjct: 179 -AHRIGQCSSVNIHYLIANGTLDTLMWGMLNRKAQVTGSTLNGRKEKI 225 >gi|156031219|ref|XP_001584934.1| hypothetical protein SS1G_14031 [Sclerotinia sclerotiorum 1980] gi|154699433|gb|EDN99171.1| hypothetical protein SS1G_14031 [Sclerotinia sclerotiorum 1980 UF-70] Length = 1393 Score = 72.7 bits (177), Expect = 3e-11, Method: Composition-based stats. Identities = 32/153 (20%), Positives = 60/153 (39%), Gaps = 23/153 (15%) Query: 51 VHDEKIKALEVII----EKANAAPIIVAYHFNSDLARLQKAFPQGR-----------TLD 95 + K AL+ ++ E+A +++ F LAR+ +L+ Sbjct: 1172 LPSAKTTALKALLLKGFEEAPDDKVVIYVQFR-TLARIIGRMCAAEGWGFLYLTGDASLE 1230 Query: 96 KDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 ++E+ + I +L A G GLN + N + LWW+ QQ RI Sbjct: 1231 HRTKAVKEFRIQDNIQILIAGLKCGGLGLNFPF-ANRCISLDLWWNYGVEQQAFGRIF-- 1287 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTK 187 + G + ++ L+ +N++D +L K Sbjct: 1288 ---RIGQNKETWMTRLVVRNSVDMRLLGMQDWK 1317 >gi|324328140|gb|ADY23400.1| helicase, putative [Bacillus thuringiensis serovar finitimus YBT-020] Length = 560 Score = 72.7 bits (177), Expect = 3e-11, Method: Composition-based stats. Identities = 28/155 (18%), Positives = 63/155 (40%), Gaps = 21/155 (13%) Query: 52 HDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQ-----GRTLDKDPCTIQEW-- 104 + K +I++ + +++ + + LQ Q ++W Sbjct: 357 FNSKANKALELIKEIDDK-VVIFTEYRASQMYLQWFLQQHGISSVPFRGGFKRGKKDWMK 415 Query: 105 ----NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 N ++ + G G+NLQ+ + ++ + L W+ +Q I RI + G Sbjct: 416 ELFQNHAQV---LIATEAGGEGINLQF-CSHMINYDLPWNPMRLEQRIGRI-----HRLG 466 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 K V +Y L ++T++E +L+ L K + + ++ Sbjct: 467 QKNDVHIYNLATKHTVEEHILKLLYEKINLFERVI 501 >gi|291615513|ref|YP_003522621.1| helicase domain protein [Nitrosococcus halophilus Nc4] gi|291582575|gb|ADE17031.1| helicase domain protein [Nitrosococcus halophilus Nc4] Length = 938 Score = 72.7 bits (177), Expect = 3e-11, Method: Composition-based stats. Identities = 28/150 (18%), Positives = 59/150 (39%), Gaps = 24/150 (16%) Query: 52 HDEKIKA-----LEVIIEKANAAPIIVAYHFNSDLARLQKAFP------------QGRTL 94 D K++A LE ++ K +++ + + L++ G++ Sbjct: 510 DDRKLQAFQSGLLEQVLTKNPDEKVLIFTEYRATQDYLRETLVARFGADKVEIICGGQSQ 569 Query: 95 DKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 D+ I + + + G G+NLQ +++ F L W+ Q I R+ Sbjct: 570 DERRAAIARFEDKGQ--FLVSTEAGGEGINLQRYCHVVFNFDLPWNPMRLVQRIGRL--- 624 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRL 184 + G + V V+ + A +T+D ++ L Sbjct: 625 --YRYGQDKRVIVFNVHAPDTLDAQIMDTL 652 >gi|229198355|ref|ZP_04325061.1| Uncharacterized ATP-dependent helicase yqhH [Bacillus cereus m1293] gi|228585055|gb|EEK43167.1| Uncharacterized ATP-dependent helicase yqhH [Bacillus cereus m1293] Length = 560 Score = 72.7 bits (177), Expect = 3e-11, Method: Composition-based stats. Identities = 28/155 (18%), Positives = 63/155 (40%), Gaps = 21/155 (13%) Query: 52 HDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQ-----GRTLDKDPCTIQEW-- 104 + K +I++ + +++ + + LQ Q ++W Sbjct: 357 FNSKANKALELIKEIDDK-VVIFTEYRASQMYLQWFLQQHGISSVPFRGGFKRGKKDWMK 415 Query: 105 ----NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 N ++ + G G+NLQ+ + ++ + L W+ +Q I RI + G Sbjct: 416 ELFQNHAQV---LIATEAGGEGINLQF-CSHMINYDLPWNPMRLEQRIGRI-----HRLG 466 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 K V +Y L ++T++E +L+ L K + + ++ Sbjct: 467 QKNDVHIYNLATKHTVEEHILKLLYEKINLFERVI 501 >gi|42571243|ref|NP_973695.1| transcription regulatory protein SNF2, putative [Arabidopsis thaliana] gi|75122353|sp|Q6EVK6|BRM_ARATH RecName: Full=ATP-dependent helicase BRM; Short=AtBRM; AltName: Full=Protein BRAHMA gi|49658966|emb|CAG28313.1| putative SNF2 subfamily ATPase [Arabidopsis thaliana] gi|330255538|gb|AEC10632.1| ATP-dependent helicase BRM [Arabidopsis thaliana] Length = 2193 Score = 72.3 bits (176), Expect = 3e-11, Method: Composition-based stats. Identities = 34/182 (18%), Positives = 67/182 (36%), Gaps = 35/182 (19%) Query: 27 SKTVKCLQL---ANGAV----YYDEEKHWKEVHDE-KIKALEVIIEKAN--AAPIIVAYH 76 + +C++L N + Y+++ V K+ L+ I+ K +++ Sbjct: 1273 TLNNRCMELRKACNHPLLNYPYFNDFSKDFLVRSCGKLWILDRILIKLQRTGHRVLLFST 1332 Query: 77 FNSDLA---------RLQKAFPQGRT-LDKDPCTIQEWNEGKIP--LLFAHPASCGHGLN 124 L RL G T L+ I ++N+ + + G GLN Sbjct: 1333 MTKLLDILEEYLQWRRLVYRRIDGTTSLEDRESAIVDFNDPDTDCFIFLLSIRAAGRGLN 1392 Query: 125 LQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRL 184 LQ + +V + + + +Q + R + G R V V Y+ E V+++L Sbjct: 1393 LQT-ADTVVIYDPDPNPKNEEQAVAR-----AHRIGQTREVKVIYM-------EAVVEKL 1439 Query: 185 RT 186 + Sbjct: 1440 SS 1441 >gi|71422266|ref|XP_812080.1| SNF2 DNA repair protein [Trypanosoma cruzi strain CL Brener] gi|122021396|sp|Q4DCH3|JBP2_TRYCR RecName: Full=Bifunctional helicase and thymine dioxygenase JBP2; AltName: Full=J-binding protein 2; Includes: RecName: Full=Probable DNA helicase JBP2; Includes: RecName: Full=Thymine dioxygenase JBP2 gi|70876818|gb|EAN90229.1| SNF2 DNA repair protein, putative [Trypanosoma cruzi] Length = 1086 Score = 72.3 bits (176), Expect = 3e-11, Method: Composition-based stats. Identities = 35/184 (19%), Positives = 67/184 (36%), Gaps = 29/184 (15%) Query: 28 KTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHF---NSDLA 82 +CL L N + K+ L I+ I+ + ++ Sbjct: 858 LIDECLSLVNSGFLTE-----FVGLSGKMTVLISILHSIREKKEKAIIFSQYVGSQDFIS 912 Query: 83 RLQKAFPQGRTL-------DKDPCTIQEWNEG-KIPLLFAHPASCGHGLNLQYGGNILVF 134 R +F + ++ TI+++ E KI L +GL+ +++++ Sbjct: 913 RTLTSFDIVSSTIRGRDCHERRRRTIEKFREDEKITCLLLSTQIGAYGLDFTAANHVILW 972 Query: 135 FSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIA--QNTIDELVLQRLRTKSTIQD 192 WW+ + Q I R + RAV VY L + ++TI VL+ K + Sbjct: 973 -DSWWNPQVESQAIAR-----AYRRNQTRAVIVYRLASEFEDTI---VLKTQIRKLALFR 1023 Query: 193 LLLN 196 ++N Sbjct: 1024 CIMN 1027 >gi|67587278|ref|XP_665245.1| DNA helicase [Cryptosporidium hominis TU502] gi|54655812|gb|EAL35016.1| DNA helicase [Cryptosporidium hominis] Length = 405 Score = 72.3 bits (176), Expect = 3e-11, Method: Composition-based stats. Identities = 40/222 (18%), Positives = 79/222 (35%), Gaps = 45/222 (20%) Query: 1 MKQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 +K + + C ++ N + S+S +L + KI ++ Sbjct: 190 IKMIKELLADPNCQVELSNFDEDESSSSMCNLHKLTC---------------EIKINPVQ 234 Query: 61 VIIE---KANAAPIIVAYHFNSDLARLQKAFPQGRTL-------------------DKDP 98 IE + N ++ H + L ++ + R +K Sbjct: 235 EYIEYLLEYNDEKYVIFGHHHVMLDAIESVLLKKRKTACNSGGPFLFIRIDGKTPGNKRE 294 Query: 99 CTIQEW-NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 ++E+ N + +CG GLNL G ++F L+W Q +R Sbjct: 295 EYVKEFQNNENCKVALLSITACGQGLNLTSAG-TVIFAELYWVPGTMLQAEDRC-----H 348 Query: 158 QAGFKRAVF-VYYLIAQNTIDELVLQRLRTKSTIQDLLLNAL 198 + G + + ++YLIA+ T+D+ + L K I L+ + Sbjct: 349 RIGTQYSCINIHYLIAEETLDDKMWGTLCRKQKIMASTLDGI 390 >gi|281207937|gb|EFA82116.1| SNF2-related domain-containing protein [Polysphondylium pallidum PN500] Length = 1139 Score = 72.3 bits (176), Expect = 3e-11, Method: Composition-based stats. Identities = 28/152 (18%), Positives = 60/152 (39%), Gaps = 20/152 (13%) Query: 42 YDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDL----ARLQKAFPQGRTL--- 94 D +E+ K+ ++ IE+ + II+ FN L ++ PQ R L Sbjct: 867 IDSSHKNQEIQSSKLNYIKKRIEEIDGQ-IIIFSQFNEMLYDIIFMIKSDMPQLRFLQYH 925 Query: 95 ------DKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMI 148 ++ + ++ + +G+N+ +IL+ +L Sbjct: 926 TGISKKERADAILTFQTNQDYKVIVMNTDLAAYGINITKATHILI-VDPIMNL-----AK 979 Query: 149 ERIGVTRQRQAGFKRAVFVYYLIAQNTIDELV 180 ER + R + G + V+V L+ +++DE++ Sbjct: 980 ERQAIKRAHRIGQTKPVYVEKLVTTDSVDEVI 1011 >gi|238588607|ref|XP_002391776.1| hypothetical protein MPER_08746 [Moniliophthora perniciosa FA553] gi|215456905|gb|EEB92706.1| hypothetical protein MPER_08746 [Moniliophthora perniciosa FA553] Length = 219 Score = 72.3 bits (176), Expect = 3e-11, Method: Composition-based stats. Identities = 27/99 (27%), Positives = 40/99 (40%), Gaps = 9/99 (9%) Query: 90 QGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIE 149 Q D + + KI H + G GLNL G N +V F W+ Q ++ Sbjct: 37 QRVEKGPDEQGVDFY---KIKTPTGHAGAGGVGLNLT-GANRVVIFDPNWNPAHDLQAMD 92 Query: 150 RIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKS 188 R + G R V+VY L+ ++EL+ R K Sbjct: 93 R-----AFRFGQWRDVYVYRLLGAGAMEELIYARQLLKQ 126 >gi|169620129|ref|XP_001803476.1| hypothetical protein SNOG_13266 [Phaeosphaeria nodorum SN15] gi|160703967|gb|EAT79150.2| hypothetical protein SNOG_13266 [Phaeosphaeria nodorum SN15] Length = 1106 Score = 72.3 bits (176), Expect = 3e-11, Method: Composition-based stats. Identities = 23/135 (17%), Positives = 50/135 (37%), Gaps = 17/135 (12%) Query: 72 IVAYHFNSDLARLQKAFPQGRTL-----------DKDPCTIQEWNEGKIPLLFAHPASCG 120 +V + + L ++ A + ++D + I ++ + G Sbjct: 955 VVFSCWTTHLDLIELALKDHQHRYCRLDGRMSRQNRDESMRVFREDPTIIVMLVSIGAGG 1014 Query: 121 HGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELV 180 GLNL N + ++ Q ++R+ + G R V + I N+ +E + Sbjct: 1015 LGLNLTT-ANKVFMMEPQFNPAAEAQAVDRV-----HRLGQDREVMIKRFIMDNSFEEKM 1068 Query: 181 LQRLRTKSTIQDLLL 195 ++ + K + DL L Sbjct: 1069 VELQQKKKKLADLTL 1083 >gi|119480763|ref|XP_001260410.1| C-5 cytosine-specific DNA methylase, putative [Neosartorya fischeri NRRL 181] gi|119408564|gb|EAW18513.1| C-5 cytosine-specific DNA methylase, putative [Neosartorya fischeri NRRL 181] Length = 2130 Score = 72.3 bits (176), Expect = 3e-11, Method: Composition-based stats. Identities = 41/175 (23%), Positives = 67/175 (38%), Gaps = 13/175 (7%) Query: 35 LANGAVYYDEEKHWKEVHDEKIKALEVIIEKA-NAAPIIVAYHFNSDLARLQKAFPQGRT 93 + + A E + K+ L I++ N I+ F + KAF Sbjct: 1935 MISAASLGFEGDRSTQYGGRKMDRLVEIVKGIPNQERAILFIQFRELIDVASKAFDLANI 1994 Query: 94 LD-----KDPCTIQEWNEGKIPLLFAHPAS-CGHGLNLQYGGNILVFFSLWWDLEEHQ-Q 146 +D I+E+ G ++ + S GLNLQ N ++F S ++ Sbjct: 1995 THTVITARDTKKIEEFKRGNGKVVILNLGSETAAGLNLQC-TNHVIFLSPMLAETQYDYD 2053 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTK----STIQDLLLNA 197 + R + G R V VY+L+ + TID + Q R K Q +L+NA Sbjct: 2054 SSMTQAIGRALRYGQTRRVHVYHLLMKRTIDINIFQERRRKILVERNGQAVLVNA 2108 >gi|42569958|ref|NP_182126.2| transcription regulatory protein SNF2, putative [Arabidopsis thaliana] gi|330255539|gb|AEC10633.1| ATP-dependent helicase BRM [Arabidopsis thaliana] Length = 2192 Score = 72.3 bits (176), Expect = 3e-11, Method: Composition-based stats. Identities = 34/182 (18%), Positives = 67/182 (36%), Gaps = 35/182 (19%) Query: 27 SKTVKCLQL---ANGAV----YYDEEKHWKEVHDE-KIKALEVIIEKAN--AAPIIVAYH 76 + +C++L N + Y+++ V K+ L+ I+ K +++ Sbjct: 1272 TLNNRCMELRKACNHPLLNYPYFNDFSKDFLVRSCGKLWILDRILIKLQRTGHRVLLFST 1331 Query: 77 FNSDLA---------RLQKAFPQGRT-LDKDPCTIQEWNEGKIP--LLFAHPASCGHGLN 124 L RL G T L+ I ++N+ + + G GLN Sbjct: 1332 MTKLLDILEEYLQWRRLVYRRIDGTTSLEDRESAIVDFNDPDTDCFIFLLSIRAAGRGLN 1391 Query: 125 LQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRL 184 LQ + +V + + + +Q + R + G R V V Y+ E V+++L Sbjct: 1392 LQT-ADTVVIYDPDPNPKNEEQAVAR-----AHRIGQTREVKVIYM-------EAVVEKL 1438 Query: 185 RT 186 + Sbjct: 1439 SS 1440 >gi|327396325|dbj|BAK13747.1| hypothetical protein PAJ_3668 [Pantoea ananatis AJ13355] Length = 1042 Score = 72.3 bits (176), Expect = 3e-11, Method: Composition-based stats. Identities = 27/171 (15%), Positives = 59/171 (34%), Gaps = 33/171 (19%) Query: 51 VHDEKIKALEVIIEK--ANAAPIIVAY-----HFNSD--------LARLQKAFPQGRTLD 95 ++ A I+ + A ++V F L + + Sbjct: 823 DASARLNACFDILHRIKAKGERVLVFIEHRKMQFRFMELARQEFGLEHI-DHINGDTPIQ 881 Query: 96 KDPCTIQEWN-----EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 K ++ + +G LL P + G GL L + ++ S WW+ +Q +R Sbjct: 882 KRQAIVRRFQHHLEQDGGFDLLVLGPKAAGTGLTLTAATH-VIHLSRWWNPAVEEQCNDR 940 Query: 151 IGVTRQRQAGFKRAVFVYYLIA------QNTIDELVLQRLRTKSTIQDLLL 195 + + G + V ++ +A +++ D L+ + K ++ L Sbjct: 941 V-----HRIGQQHPVQIHMPMAIHAGYQEHSFDCLLQGLMSRKRSLARAAL 986 >gi|270010822|gb|EFA07270.1| hypothetical protein TcasGA2_TC013301 [Tribolium castaneum] Length = 1294 Score = 72.3 bits (176), Expect = 3e-11, Method: Composition-based stats. Identities = 30/164 (18%), Positives = 60/164 (36%), Gaps = 24/164 (14%) Query: 53 DEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQKAFPQGR----------------TL 94 KIK + II + N +++ + +L ++ Q R Sbjct: 1026 STKIKLILDIISECMRNNEKVLIFGQYLVELDIVEHFLKQFRNWRPNVDYYRMDGDTSVE 1085 Query: 95 DKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 ++D + + + G GLNL G N ++ + Q + Sbjct: 1086 NRDILCKKFNSNPTSKVFLLTHKVGGLGLNLT-GANRVILIGSNHNPSHDSQ-----SLY 1139 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNAL 198 R + G +R +VY L++ T++E + R K +I +++ L Sbjct: 1140 RVYRFGQERKCYVYRLVSLGTMEEKIYHRCVLKLSISGTVVDKL 1183 >gi|42783352|ref|NP_980599.1| helicase, putative [Bacillus cereus ATCC 10987] gi|206978444|ref|ZP_03239310.1| putative helicase [Bacillus cereus H3081.97] gi|222097673|ref|YP_002531730.1| helicase, putative [Bacillus cereus Q1] gi|42739280|gb|AAS43207.1| helicase, putative [Bacillus cereus ATCC 10987] gi|206743342|gb|EDZ54783.1| putative helicase [Bacillus cereus H3081.97] gi|221241731|gb|ACM14441.1| helicase, putative [Bacillus cereus Q1] Length = 560 Score = 72.3 bits (176), Expect = 3e-11, Method: Composition-based stats. Identities = 28/155 (18%), Positives = 63/155 (40%), Gaps = 21/155 (13%) Query: 52 HDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQ-----GRTLDKDPCTIQEW-- 104 + K +I++ + +++ + + LQ Q ++W Sbjct: 357 FNSKANKALELIKEIDDK-VVIFTEYRASQMYLQWFLQQHGISSVPFRGGFKRGKKDWMK 415 Query: 105 ----NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 N ++ + G G+NLQ+ + ++ + L W+ +Q I RI + G Sbjct: 416 ELFQNHAQV---LIATEAGGEGINLQF-CSHMINYDLPWNPMRLEQRIGRI-----HRLG 466 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 K V +Y L ++T++E +L+ L K + + ++ Sbjct: 467 QKNDVHIYNLATKHTVEEHILKLLYEKINLFERVI 501 >gi|296204912|ref|XP_002749531.1| PREDICTED: zinc finger Ran-binding domain-containing protein 3 [Callithrix jacchus] Length = 1080 Score = 72.3 bits (176), Expect = 4e-11, Method: Composition-based stats. Identities = 42/216 (19%), Positives = 86/216 (39%), Gaps = 25/216 (11%) Query: 6 KFQRELYCDLQGENIEAFNSA-SKTVKCLQLAN-GAVYYDEE---KHWKEVHDEKIKALE 60 K ++ + DL + N++ + K +++ N GA+ + +K+ K A++ Sbjct: 268 KIRQRIPFDLPSAAAKELNTSFEEWKKLMRMPNSGAMETVMGLITRMFKQTAIAKAGAVK 327 Query: 61 VIIE---KANAAPIIVAYHFNSDLARLQKAFPQGRTL-----------DKDPCTIQEWNE 106 I+ + ++ +V H S L +A + + ++ Q + Sbjct: 328 DYIKMMLQNDSLKFLVFAHHLSMLQACTEAVIENKIRYIRIDGSVSSSERIHLVNQFQKD 387 Query: 107 GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVF 166 + + G GL + +VF L+WD +Q +R + G +V Sbjct: 388 PDTRVAILSIQAAGQGLTFT-AASHVVFAELYWDPGHIKQAEDR-----AHRIGQCSSVN 441 Query: 167 VYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKET 202 ++YLIA T+D L+ L K+ + LN K++ Sbjct: 442 IHYLIANGTLDTLMWGMLNRKAQVTGSTLNGRKEKI 477 >gi|229543866|ref|ZP_04432925.1| SNF2-related protein [Bacillus coagulans 36D1] gi|229325005|gb|EEN90681.1| SNF2-related protein [Bacillus coagulans 36D1] Length = 567 Score = 72.3 bits (176), Expect = 4e-11, Method: Composition-based stats. Identities = 36/200 (18%), Positives = 76/200 (38%), Gaps = 21/200 (10%) Query: 7 FQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKA 66 QRE + + N KT + + V +K + K + +I+ Sbjct: 312 LQREACSSREAVFVTLKNLLKKTEQPSPVLEETVAALIQKIEAVKTNSKAEKALELIQNI 371 Query: 67 NAAPIIVAYHFNSDLARLQKAFPQ-----GRTLDKDPCTIQEW------NEGKIPLLFAH 115 + +I+ + + LQ Q ++W N ++ Sbjct: 372 DDK-VIIFTEYRATQLYLQWFLKQHGISSVPFRGGFKRGKKDWMRQLFENHAQV---LIA 427 Query: 116 PASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNT 175 + G G+NLQ+ + ++ F L W+ +Q I R+ + G ++ V +Y +NT Sbjct: 428 TEAGGEGINLQF-CHHMINFDLPWNPMRLEQRIGRV-----HRLGQEKDVHIYNFATKNT 481 Query: 176 IDELVLQRLRTKSTIQDLLL 195 ++E +L+ L K + + ++ Sbjct: 482 VEEHILKLLYEKIHLFERVI 501 >gi|30044094|ref|NP_835691.1| similar to DNA helicase [Rhodothermus phage RM378] Length = 670 Score = 72.3 bits (176), Expect = 4e-11, Method: Composition-based stats. Identities = 23/139 (16%), Positives = 57/139 (41%), Gaps = 19/139 (13%) Query: 61 VIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLD-----------KDPCTIQEWNEGKI 109 ++++ ++V H + D+ + + + + + + ++++ GK+ Sbjct: 417 SLVKEEEVDGLVVFAH-HHDVFEIIQKVLEAKGITYARITGEENVVQRQKAVEDFQSGKV 475 Query: 110 PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFK-RAVFVY 168 ++ + G G+ L VF L W Q +R+ + G + V ++ Sbjct: 476 DVVLCSILAAGVGITLTR-AKTAVFVELDWVPGNILQAEDRL-----HRIGQEAECVDIH 529 Query: 169 YLIAQNTIDELVLQRLRTK 187 Y++A++T+DE L K Sbjct: 530 YIVARHTLDENFADYLTRK 548 >gi|89099218|ref|ZP_01172096.1| DNA/RNA helicase (SNF2 family) protein [Bacillus sp. NRRL B-14911] gi|89086064|gb|EAR65187.1| DNA/RNA helicase (SNF2 family) protein [Bacillus sp. NRRL B-14911] Length = 562 Score = 72.3 bits (176), Expect = 4e-11, Method: Composition-based stats. Identities = 37/198 (18%), Positives = 78/198 (39%), Gaps = 17/198 (8%) Query: 7 FQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKA 66 QRE + N S+ + + + K K + K + +I+ Sbjct: 312 LQREACSSREAVFYTLRNMVSRQEAPSDMFQEQIQFLVSKVEKVQRNSKAEKALELIKGI 371 Query: 67 NAAPIIVAYHFNSDLARLQKAFPQ---------GRTLDKDPCTIQEWNEGKIPLLFAHPA 117 + +I+ + + LQ Q G ++E + + +L A Sbjct: 372 DDK-VIIFTEYRATQLYLQWFLKQHGISSVPFRGGFKRGKKDWMRELFKNNVQVLIA-TE 429 Query: 118 SCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 + G G+NLQ+ N ++ + L W+ +Q I RI + G ++ V +Y ++T++ Sbjct: 430 AGGEGINLQF-CNHIINYDLPWNPMRLEQRIGRI-----HRLGQEKDVMIYNFAVKDTVE 483 Query: 178 ELVLQRLRTKSTIQDLLL 195 E +L+ L K + + ++ Sbjct: 484 EHILKLLYEKIHLFEKVI 501 >gi|23099360|ref|NP_692826.1| helicase [Oceanobacillus iheyensis HTE831] gi|22777589|dbj|BAC13861.1| helicase (Snf2/Rad54 family) [Oceanobacillus iheyensis HTE831] Length = 556 Score = 72.3 bits (176), Expect = 4e-11, Method: Composition-based stats. Identities = 38/202 (18%), Positives = 74/202 (36%), Gaps = 34/202 (16%) Query: 22 AFNSASKTVKCLQLANG--AVY----------YDEEKHWKEVHDE--------KIKALEV 61 +S SK + + A Y DEE K++ + K + + Sbjct: 299 GMSSFSKITYLREFCSSREACYMSLVKFVKDIEDEEHPLKQIISDLESLEQHIKAEQMVK 358 Query: 62 IIEKANAAPIIVAYHFNSDLARLQKAFPQGRT--------LDKDPCTIQEWNEGKIPLLF 113 +I+ +IV + + LQ Q + + + Sbjct: 359 LIQSLGDEKVIVFTEYRATQYYLQWFLQQHGITSVPFRGGFKRGKKDWMKQLFRDHAQVL 418 Query: 114 AHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQ 173 + G G+NLQ+ + ++ + L W+ +Q I RI + G ++ V +Y L+ + Sbjct: 419 IATEAGGEGINLQF-CHNMINYDLPWNPMRLEQRIGRI-----HRFGQEKDVQIYNLVIK 472 Query: 174 NTIDELVLQRLRTKSTIQDLLL 195 NTI+E +L L K + ++ Sbjct: 473 NTIEEHMLSLLYEKIDLFQNVI 494 >gi|78045450|ref|YP_361700.1| DNA helicase [Xanthomonas campestris pv. vesicatoria str. 85-10] gi|78033954|emb|CAJ19953.1| DNA helicase [Xanthomonas campestris pv. vesicatoria str. 85-10] Length = 675 Score = 72.3 bits (176), Expect = 4e-11, Method: Composition-based stats. Identities = 37/189 (19%), Positives = 64/189 (33%), Gaps = 37/189 (19%) Query: 22 AFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVII---EKANAAPIIVAYHFN 78 + + +K + Q + +K L I E ++ A I+ F Sbjct: 471 SLTALAKIGRLRQY---------------LERQKADWLIETIAGFEPSDKALIMC--EFQ 513 Query: 79 SDLARLQKAFPQGRT----------LDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQY 127 + L + F + + I + E + + G G L Sbjct: 514 DTVEYLAEEFAKAGIEVVTFLGKHSKARKQQAIDRFQSEPTVRCFIGTTKAAGVGHTLT- 572 Query: 128 GGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTK 187 NI+ F SL W +Q +R + G KR V V + TIDE + ++ K Sbjct: 573 AANIVCFASLPWTNALKKQAEDRAW-----RYGQKRVVTVLVPLFAGTIDEQAMALIQHK 627 Query: 188 STIQDLLLN 196 + I++ LL Sbjct: 628 AAIENDLLE 636 >gi|12855912|dbj|BAB30499.1| unnamed protein product [Mus musculus] Length = 530 Score = 72.3 bits (176), Expect = 4e-11, Method: Composition-based stats. Identities = 34/167 (20%), Positives = 66/167 (39%), Gaps = 20/167 (11%) Query: 49 KEVHDEKIKALEVIIE---KANAAPIIVAYHFNSDLARLQKAFPQGRTL----------- 94 K+ K A++ I+ + ++ +V H S L +A + ++ Sbjct: 320 KQTAIAKAGAVKDYIKMLLQNDSLKFLVFAHHLSMLQACTEAVIESKSRYIRIDGSVPSS 379 Query: 95 DKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 ++ Q + + + G GL + +VF L+WD +Q +R Sbjct: 380 ERIHLVNQFQKDPDTRVAILSIQAAGQGLTFT-AASHVVFAELYWDPGHIKQAEDR---- 434 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 + G +V ++YLIA T+D L+ L K+ + LN K++ Sbjct: 435 -AHRIGQCSSVNIHYLIANGTLDSLMWAMLNRKAQVTGSTLNGRKEK 480 >gi|70944659|ref|XP_742238.1| DNA helicase [Plasmodium chabaudi chabaudi] gi|56521100|emb|CAH78659.1| DNA helicase, putative [Plasmodium chabaudi chabaudi] Length = 437 Score = 72.3 bits (176), Expect = 4e-11, Method: Composition-based stats. Identities = 35/148 (23%), Positives = 62/148 (41%), Gaps = 20/148 (13%) Query: 54 EKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQKAFPQGRT----------LDKDPCTI 101 K+KA++ I ++ H + + + + + +DK I Sbjct: 171 AKVKAIKEYITYLIDADIKFLLFCHHKLVMDEIDEFLKEKKLGFIRVDGLTPIDKREVYI 230 Query: 102 QEWNEG-KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 + + KI + +CG GLNL N +VF L+W + Q +R + G Sbjct: 231 KNFQSDEKIRIAILSITACGVGLNLT-AANTVVFGELYWVPGQMIQAEDR-----AHRIG 284 Query: 161 FKR-AVFVYYLIAQNTIDELVLQRLRTK 187 + ++YL+AQNTIDE+V + + K Sbjct: 285 TTHDTINIHYLVAQNTIDEVVWKIINRK 312 >gi|119715910|ref|YP_922875.1| helicase domain-containing protein [Nocardioides sp. JS614] gi|119536571|gb|ABL81188.1| helicase domain protein [Nocardioides sp. JS614] Length = 723 Score = 72.3 bits (176), Expect = 4e-11, Method: Composition-based stats. Identities = 24/93 (25%), Positives = 45/93 (48%), Gaps = 6/93 (6%) Query: 105 NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA 164 N+ ++ ++ + G G+NLQ N +V L W E Q I+R+ + G + Sbjct: 603 NDPEVAVIVCSLTAAGVGVNLQVASN-VVLAELSWTDAEQTQAIDRV-----HRIGQEEP 656 Query: 165 VFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 V + +IA TID V + + +K+ + + L+ Sbjct: 657 VTAWRIIASQTIDTRVAELIDSKAGLAAVALDG 689 >gi|224499223|ref|ZP_03667572.1| hypothetical protein LmonF1_05832 [Listeria monocytogenes Finland 1988] Length = 966 Score = 72.3 bits (176), Expect = 4e-11, Method: Composition-based stats. Identities = 27/146 (18%), Positives = 52/146 (35%), Gaps = 16/146 (10%) Query: 1 MKQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 + K Q +L E + + Q+ + E + K+ L Sbjct: 824 LAYLEKIQADLEASNGNAGEERIKLLAGLTRLRQICCDPSLFVEN---YQGESGKLLQLF 880 Query: 61 VIIEKA--NAAPIIVAYHFNSDLARLQKAFPQ---------GRTLDKDPCT-IQEWNEGK 108 I+ A N I++ F L+ +++ + G+T K + +NEG+ Sbjct: 881 DTIQTARENGKRILIFSQFTGMLSIIRQKLEEDGQTLFYMDGKTPSKTRLDMVNAFNEGE 940 Query: 109 IPLLFAHPASCGHGLNLQYGGNILVF 134 + + G GLNL G + ++F Sbjct: 941 NDIFLISLKAGGTGLNL-VGADTVIF 965 >gi|311742523|ref|ZP_07716332.1| ATP-dependent RNA helicase [Aeromicrobium marinum DSM 15272] gi|311314151|gb|EFQ84059.1| ATP-dependent RNA helicase [Aeromicrobium marinum DSM 15272] Length = 710 Score = 72.3 bits (176), Expect = 4e-11, Method: Composition-based stats. Identities = 24/102 (23%), Positives = 45/102 (44%), Gaps = 7/102 (6%) Query: 97 DPCTIQEW-NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTR 155 I + + + ++ ++ G GLNL NI V L W E Q I+R+ Sbjct: 586 RQQNIDAFVEDPDVAVVVCSLSAAGVGLNLHVASNI-VLAELSWTDAEQTQAIDRV---- 640 Query: 156 QRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + G + V + +IA TID +++ + +K+ + L+ Sbjct: 641 -HRIGQEEPVTAWRIIAAQTIDTKIVELIDSKAGLAARALDG 681 >gi|75760928|ref|ZP_00740938.1| Superfamily II DNA/RNA helicases, SNF2 family [Bacillus thuringiensis serovar israelensis ATCC 35646] gi|228902741|ref|ZP_04066888.1| Uncharacterized ATP-dependent helicase yqhH [Bacillus thuringiensis IBL 4222] gi|74491598|gb|EAO54804.1| Superfamily II DNA/RNA helicases, SNF2 family [Bacillus thuringiensis serovar israelensis ATCC 35646] gi|228856928|gb|EEN01441.1| Uncharacterized ATP-dependent helicase yqhH [Bacillus thuringiensis IBL 4222] Length = 560 Score = 72.3 bits (176), Expect = 4e-11, Method: Composition-based stats. Identities = 32/158 (20%), Positives = 66/158 (41%), Gaps = 22/158 (13%) Query: 49 KEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQ-----GRTLDKDPCTIQE 103 + + KALE+I E + +++ + + LQ Q ++ Sbjct: 355 IPFNSKATKALELIKEIDD--KVVIFTEYRASQMYLQWFLQQHGISSVPFRGGFKRGKKD 412 Query: 104 W------NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 W N ++ + G G+NLQ+ + ++ + L W+ +Q I RI Sbjct: 413 WMKELFQNHAQV---LIATEAGGEGINLQF-CSHMINYDLPWNPMRLEQRIGRI-----H 463 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 + G K V +Y L ++T++E +L+ L K + + ++ Sbjct: 464 RLGQKNDVHIYNLATKHTVEEHILKLLYEKINLFERVI 501 >gi|320326123|gb|EFW82179.1| SNF2-related:helicase [Pseudomonas syringae pv. glycinea str. B076] Length = 650 Score = 72.3 bits (176), Expect = 4e-11, Method: Composition-based stats. Identities = 28/154 (18%), Positives = 58/154 (37%), Gaps = 18/154 (11%) Query: 55 KIKALEVIIEKAN-AAPIIVAYHFNSDLARLQKAFPQGRT----------LDKDPCTIQE 103 K++ + ++ + + +I+ + +A L++ + K I Sbjct: 488 KVRIVADLMAELDVDDKVILFCEYQESVATLREHCLKMGIGCVTLVGSDSPKKRQKAIDA 547 Query: 104 WNEG-KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFK 162 + + + ++ G G NL N + F L W Q +R + G Sbjct: 548 FQQDQDCRVFIGTRSAAGTGYNLT-AANYVFFLGLPWTPGLQDQAEDR-----AYRNGQL 601 Query: 163 RAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 R V V +A++TID+ + Q L K + L++ Sbjct: 602 RMVVVKIPLAEDTIDQQLWQMLMDKRALASDLID 635 >gi|229075933|ref|ZP_04208909.1| Uncharacterized ATP-dependent helicase yqhH [Bacillus cereus Rock4-18] gi|229098700|ref|ZP_04229640.1| Uncharacterized ATP-dependent helicase yqhH [Bacillus cereus Rock3-29] gi|229117725|ref|ZP_04247094.1| Uncharacterized ATP-dependent helicase yqhH [Bacillus cereus Rock1-3] gi|228665702|gb|EEL21175.1| Uncharacterized ATP-dependent helicase yqhH [Bacillus cereus Rock1-3] gi|228684779|gb|EEL38717.1| Uncharacterized ATP-dependent helicase yqhH [Bacillus cereus Rock3-29] gi|228707248|gb|EEL59445.1| Uncharacterized ATP-dependent helicase yqhH [Bacillus cereus Rock4-18] Length = 560 Score = 72.3 bits (176), Expect = 4e-11, Method: Composition-based stats. Identities = 28/152 (18%), Positives = 63/152 (41%), Gaps = 15/152 (9%) Query: 52 HDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQ-----GRTLDKDPCTIQEWNE 106 + K +I++ + +++ + + LQ Q ++W + Sbjct: 357 FNSKANKALELIKEIDDK-VVIFTEYRASQMYLQWFLQQHGISSVPFRGGFKRGKKDWMK 415 Query: 107 G---KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKR 163 K + + G G+NLQ+ + ++ + L W+ +Q I RI + G K Sbjct: 416 ELFQKHAQVLIATEAGGEGINLQF-CSHMINYDLPWNPMRLEQRIGRI-----HRLGQKN 469 Query: 164 AVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 V +Y L ++T++E +L+ L K + + ++ Sbjct: 470 DVHIYNLATKHTVEEHILKLLYEKINLFERVI 501 >gi|229104857|ref|ZP_04235517.1| Uncharacterized ATP-dependent helicase yqhH [Bacillus cereus Rock3-28] gi|228678574|gb|EEL32791.1| Uncharacterized ATP-dependent helicase yqhH [Bacillus cereus Rock3-28] Length = 560 Score = 72.3 bits (176), Expect = 4e-11, Method: Composition-based stats. Identities = 28/152 (18%), Positives = 63/152 (41%), Gaps = 15/152 (9%) Query: 52 HDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQ-----GRTLDKDPCTIQEWNE 106 + K +I++ + +++ + + LQ Q ++W + Sbjct: 357 FNSKANKALELIKEIDDK-VVIFTEYRASQMYLQWFLQQHGISSVPFRGGFKRGKKDWMK 415 Query: 107 G---KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKR 163 K + + G G+NLQ+ + ++ + L W+ +Q I RI + G K Sbjct: 416 ELFQKHAQVLIATEAGGEGINLQF-CSHMINYDLPWNPMRLEQRIGRI-----HRLGQKN 469 Query: 164 AVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 V +Y L ++T++E +L+ L K + + ++ Sbjct: 470 DVHIYNLATKHTVEEHILKLLYEKINLFERVI 501 >gi|224139690|ref|XP_002323229.1| chromatin remodeling complex subunit [Populus trichocarpa] gi|222867859|gb|EEF04990.1| chromatin remodeling complex subunit [Populus trichocarpa] Length = 743 Score = 71.9 bits (175), Expect = 4e-11, Method: Composition-based stats. Identities = 32/178 (17%), Positives = 63/178 (35%), Gaps = 21/178 (11%) Query: 43 DEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYH----FNSDLARLQKAFPQGRTL---- 94 + K K+ AL ++++++ F+ L L++ Sbjct: 563 ENTKKTSRTTPSKVSALIELLKESSVVNSSSKSVVFSLFDKMLVLLEEPLKDAGFNTLQL 622 Query: 95 ------DKDPCTIQEWNEGKI-PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQM 147 I+E+ + +L A + G+NL + + WW+ + ++ Sbjct: 623 DASTDERGQAEIIKEFGSARPGTVLLASLKTSVFGINLT-AASKVYLLEPWWNSADEERA 681 Query: 148 IERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIHV 205 I + G K V + LIAQN+I+E +L+ K + +KE V Sbjct: 682 I-----NCVHRYGQKENVRIVRLIAQNSIEERILEMQERKKLASEAFRRQGQKERREV 734 >gi|224064045|ref|XP_002301364.1| chromatin remodeling complex subunit [Populus trichocarpa] gi|222843090|gb|EEE80637.1| chromatin remodeling complex subunit [Populus trichocarpa] Length = 2222 Score = 71.9 bits (175), Expect = 4e-11, Method: Composition-based stats. Identities = 32/168 (19%), Positives = 59/168 (35%), Gaps = 28/168 (16%) Query: 27 SKTVKCLQL---ANGAV-----YYDEEKHWKEVHDEKIKALEVIIEKAN--AAPIIVAYH 76 + +C++L N + + D K + K+ L+ I+ K +++ Sbjct: 1278 TLNNRCMELRKTCNHPLLNYPYFNDLSKDFLVKSCGKLWVLDRILIKLQRTGHRVLLFST 1337 Query: 77 FNSDLA---------RLQKAFPQGRT-LDKDPCTIQEWNEG--KIPLLFAHPASCGHGLN 124 L RL G T L+ I ++N + + G GLN Sbjct: 1338 MTKLLDILEEYLQWRRLVYRRIDGTTSLEDRESAIVDFNSPGSDCFIFLLSIRAAGRGLN 1397 Query: 125 LQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIA 172 LQ + +V + + + +Q + R + G R V V Y+ A Sbjct: 1398 LQ-SADTVVIYDPDPNPKNEEQAVAR-----AHRIGQTREVKVIYMEA 1439 >gi|225558413|gb|EEH06697.1| DNA repair helicase rad5,16 [Ajellomyces capsulatus G186AR] Length = 1118 Score = 71.9 bits (175), Expect = 4e-11, Method: Composition-based stats. Identities = 40/203 (19%), Positives = 73/203 (35%), Gaps = 27/203 (13%) Query: 14 DLQGENIEAFNSASKTVKCLQLANGAV-YYDEEKHW-----KEVHDEKIKA----LEVII 63 L+G + NS K+ K V +E+ +W + K+ A L Sbjct: 734 QLEGNPVGMVNSHKKSRKKTDRKGSEVESSNEDMNWVACVGHLMPGAKLTAISSCLVNWF 793 Query: 64 EKANAAPIIVAYHFNSDLARLQKAFPQGR----------TLDKDPCTIQEW-NEGKIPLL 112 + + +++ F L + R + + I+E+ + I +L Sbjct: 794 KNSVETKVVIFTQFLGMAHVLGSMCQENRWGHLSLTGKMPIRQREKCIEEFSKDPAIRIL 853 Query: 113 FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIA 172 + G GL+L N + LWW+ QQ R+ + KR V ++ Sbjct: 854 VCSLRTAGTGLDLT-AANKCILVDLWWNEAIEQQAFFRLF-----RINQKRKVEFVRVVV 907 Query: 173 QNTIDELVLQRLRTKSTIQDLLL 195 +N+ID+ + KS D +L Sbjct: 908 RNSIDDRLQLIQEDKSNNIDRVL 930 >gi|47221566|emb|CAF97831.1| unnamed protein product [Tetraodon nigroviridis] Length = 1989 Score = 71.9 bits (175), Expect = 5e-11, Method: Composition-based stats. Identities = 27/216 (12%), Positives = 56/216 (25%), Gaps = 71/216 (32%) Query: 45 EKHWKEVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQ----------KAFPQGR 92 E + K+ L+ ++ K ++V L L+ + G Sbjct: 999 EGNSLVKSSGKLMLLQKMMRKLKEGGHRVLVFSQMTKMLDLLEDFLENEGYKYERIDGGV 1058 Query: 93 TLDKDPCTIQEWNE----------------------------------GKIPLLFAHPAS 118 T + I +N + Sbjct: 1059 TGNMRQEAIDRFNGEFKAVVCLDFKTQLQRSNNVLTFCLLSSSFTAPGAPQFAFLLSTRA 1118 Query: 119 CGHGLNLQYGGNILVFFSLWWDLEEHQQ---MIERI---------------------GVT 154 G G+NL + ++ + W+ Q RI + Sbjct: 1119 GGLGINL-ASADTVIIYDSDWNPHNDIQVCSATARICVFVSDRIKEDNAVCFVGALQAFS 1177 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 R + G R V +Y + + +++E + Q + K + Sbjct: 1178 RAHRIGQNRKVMIYRFVTKASVEERITQVAKKKMML 1213 >gi|114680096|ref|YP_758509.1| global transactivator [Plutella xylostella multiple nucleopolyhedrovirus] gi|91982160|gb|ABE68428.1| global transactivator [Plutella xylostella multiple nucleopolyhedrovirus] Length = 506 Score = 71.9 bits (175), Expect = 5e-11, Method: Composition-based stats. Identities = 34/196 (17%), Positives = 69/196 (35%), Gaps = 34/196 (17%) Query: 28 KTVKCLQLANGAVYYDEEKHWKEVHDEK------------IKALEVIIEKANAAPIIVAY 75 +K Q+ K+ E +D + ++ I+ ++ I+V Sbjct: 303 LILKLRQICCHPYLAMHCKNILETNDCFKMDYMSSKCKRVLDLVDDILNTSDDKIILV-S 361 Query: 76 HFNSDLARLQKAFPQ---GRTLDKDPCTIQE-------WNEGKIP---LLFAHPASCGHG 122 + L + F Q + +++ +N+ +L G G Sbjct: 362 QWVEYLKIFENFFKQKNIATLMYTGQLKVEDRILAETTFNDAANTQHRILLLSIKCGGVG 421 Query: 123 LNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYL--IAQNTIDELV 180 LNL GGN +V W+ + Q +RI + G + +VY + + N+I++ + Sbjct: 422 LNL-IGGNHIVMLEPHWNPQIELQAQDRIS-----RMGQTKNTYVYKMLNVEDNSIEKYI 475 Query: 181 LQRLRTKSTIQDLLLN 196 QR K + + Sbjct: 476 KQRQDKKIAFVNTVFE 491 >gi|302883508|ref|XP_003040654.1| hypothetical protein NECHADRAFT_79818 [Nectria haematococca mpVI 77-13-4] gi|256721542|gb|EEU34941.1| hypothetical protein NECHADRAFT_79818 [Nectria haematococca mpVI 77-13-4] Length = 895 Score = 71.9 bits (175), Expect = 5e-11, Method: Composition-based stats. Identities = 30/150 (20%), Positives = 51/150 (34%), Gaps = 27/150 (18%) Query: 50 EVHDEKIKALE-----VIIEKANA---API--IVAYHFNSDLARLQKAFPQG-------- 91 K++AL +E N P+ +V ++ L +Q AF Q Sbjct: 686 HHPSAKVEALIRNLGNEQVENQNGSEARPVKSVVFSYWTKMLDLVQIAFRQSGYSYERID 745 Query: 92 ---RTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMI 148 + + N +L A S G G++L N + W+ +Q I Sbjct: 746 GQSSLRQRHRAMSKFNNNPACTVLLATIGSAGEGIDLT-AANHVHLMEPHWNPMAEEQAI 804 Query: 149 ERIGVTRQRQAGFKRAVFVYYLIAQNTIDE 178 R+ + G +R V I +I+E Sbjct: 805 ARV-----HRIGQRRPVIATKYITPRSIEE 829 >gi|229821239|ref|YP_002882765.1| helicase [Beutenbergia cavernae DSM 12333] gi|229567152|gb|ACQ81003.1| helicase domain protein [Beutenbergia cavernae DSM 12333] Length = 672 Score = 71.9 bits (175), Expect = 5e-11, Method: Composition-based stats. Identities = 24/119 (20%), Positives = 49/119 (41%), Gaps = 12/119 (10%) Query: 85 QKAFPQGRTLDKDPCTIQEWN------EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLW 138 ++ + ++E N + ++ ++ + G G+NLQ + LV L Sbjct: 524 RRGLRYASIRGEQTTAVRERNVTAFLEDPEVAVVVCSLTAAGVGINLQVASD-LVLAELS 582 Query: 139 WDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 W E Q I+R+ + G + V + +IA TID + + + K+ + L+ Sbjct: 583 WTDAEQTQAIDRV-----HRIGQSQPVTAWRIIAAQTIDARIAELIDAKAGLAARALDG 636 >gi|146294462|ref|YP_001184886.1| helicase domain-containing protein [Shewanella putrefaciens CN-32] gi|145566152|gb|ABP77087.1| helicase domain protein [Shewanella putrefaciens CN-32] Length = 877 Score = 71.9 bits (175), Expect = 5e-11, Method: Composition-based stats. Identities = 25/165 (15%), Positives = 62/165 (37%), Gaps = 20/165 (12%) Query: 52 HDEKIKALEV-----IIEKANAAPIIVAYHFNSDLARLQKA----FPQGRTLDKDPCTIQ 102 HD+K+ +++ I++ + + +++A F + + + Sbjct: 446 HDDKLSRFMDTLLKQLLKDNPNEKILIFSEYRATQEYIKEAITGQFGEDKVVLLHGGMSH 505 Query: 103 E------WNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 + W + G G+NLQ + +V + L W+ Q I R+ Sbjct: 506 DERRDVIWQFDNEVQFLISTEAGGEGINLQQHCHTMVNYDLPWNPMRLVQRIGRL----- 560 Query: 157 RQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 + G ++ V V + + T+DE ++ + + + A++ + Sbjct: 561 YRYGQQKKVVVLNVNSPGTVDEQIIALMYQRIEQVVSDMAAVQGD 605 >gi|261415452|ref|YP_003249135.1| helicase domain protein [Fibrobacter succinogenes subsp. succinogenes S85] gi|261371908|gb|ACX74653.1| helicase domain protein [Fibrobacter succinogenes subsp. succinogenes S85] Length = 876 Score = 71.9 bits (175), Expect = 5e-11, Method: Composition-based stats. Identities = 35/226 (15%), Positives = 80/226 (35%), Gaps = 37/226 (16%) Query: 1 MKQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 + Y + +RE + E + + ++ +K ++ + EK K + +I + Sbjct: 394 LSNYGEDEREGF---DDEATISVQTLAEPLKLMENEIDHINLLLEKATKVTSETRINRIV 450 Query: 61 VII-EKANAAPIIVAYHFNSDLARLQ------------------KAFPQGRTLDKDPCTI 101 II EK +++ + + + ++ D I Sbjct: 451 EIIKEKYPNDQVLLFTEYKRTQSLMMTELMKVWGDNSVTIINGDESLKDVVYPDGCSRDI 510 Query: 102 --------QEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGV 153 +++N G++ + G G++LQ ++L+ L W+ Q + R+ Sbjct: 511 SISRNDACEKFNNGEVR-FLISTEAAGEGIDLQKNCHVLIHIDLPWNPMRLHQRVGRV-- 567 Query: 154 TRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTK-STIQDLLLNAL 198 + G V V + + I+ + L K IQ +L ++ Sbjct: 568 ---HRLGQTHDVEVVSVRNPDNIESKIWGYLEEKIDQIQKMLSESM 610 >gi|149637050|ref|XP_001510449.1| PREDICTED: similar to zinc finger, RAN-binding domain containing 3 [Ornithorhynchus anatinus] Length = 1115 Score = 71.9 bits (175), Expect = 5e-11, Method: Composition-based stats. Identities = 35/167 (20%), Positives = 63/167 (37%), Gaps = 20/167 (11%) Query: 49 KEVHDEKIKALEVIIE---KANAAPIIVAYHFNSDLARLQKAFPQGRTL----------- 94 KE K A++ I+ + + +V H S L +A + + Sbjct: 344 KETTLAKAGAVKDYIKLMLQNESLKFLVFAHHLSMLQACTEAAVENKVRYIRIDGSVPSS 403 Query: 95 DKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 ++ Q + + + G GL + +VF L+WD +Q +R Sbjct: 404 ERMHLVQQFQKDPDTRMAVLSIQAAGQGLTFTAATH-VVFAELYWDPGHIKQAEDR---- 458 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 + G +V ++YLIA T+D ++ L K+ I LN K+ Sbjct: 459 -AHRIGQCSSVNIHYLIANGTLDSVMWGMLNRKAGITGSTLNGRKER 504 >gi|170727301|ref|YP_001761327.1| helicase domain-containing protein [Shewanella woodyi ATCC 51908] gi|169812648|gb|ACA87232.1| helicase domain protein [Shewanella woodyi ATCC 51908] Length = 937 Score = 71.9 bits (175), Expect = 5e-11, Method: Composition-based stats. Identities = 32/149 (21%), Positives = 60/149 (40%), Gaps = 26/149 (17%) Query: 52 HDEKIKALEV-----IIEKANAAPIIVAYHFNSDLARLQKAFPQ------------GRTL 94 HD K K I++ +++ + S L K Q G L Sbjct: 508 HDNKSKQFIDTIITKILKNNPKEKVLIFTEYRSTQQYLAKTLQQKIGADSVNLIYGGMKL 567 Query: 95 DKDPCTIQEW-NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGV 153 D+ I ++ N G+ + G G+NLQ +I++ + L W+ Q + R+ Sbjct: 568 DERKQQIYDFENTGQ---FLISTEAGGEGINLQEHCHIMINYDLPWNPMRLVQRVGRL-- 622 Query: 154 TRQRQAGFKRAVFVYYLIAQNTIDELVLQ 182 + G + V V+ + + +++DE VL+ Sbjct: 623 ---YRYGQLKRVVVFNINSSDSLDEKVLE 648 >gi|198411801|ref|XP_002126705.1| PREDICTED: similar to RAD54-like [Ciona intestinalis] Length = 158 Score = 71.9 bits (175), Expect = 5e-11, Method: Composition-based stats. Identities = 16/70 (22%), Positives = 31/70 (44%), Gaps = 5/70 (7%) Query: 135 FSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 F W+ +Q + R+ + G K+ F+Y L+ TI+E + QR K + + Sbjct: 2 FDPDWNPANDEQAMARVW-----RDGQKKPCFIYRLLGTGTIEEKIFQRQAHKKALSSCV 56 Query: 195 LNALKKETIH 204 ++ + H Sbjct: 57 VDQEEDVARH 66 >gi|221052999|ref|XP_002257874.1| DNA helicase [Plasmodium knowlesi strain H] gi|193807706|emb|CAQ38410.1| DNA helicase, putative [Plasmodium knowlesi strain H] Length = 1578 Score = 71.9 bits (175), Expect = 5e-11, Method: Composition-based stats. Identities = 25/104 (24%), Positives = 45/104 (43%), Gaps = 6/104 (5%) Query: 94 LDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGV 153 ++ DP + + S GLNLQ + ++ F ++ + Q + R Sbjct: 1114 IEGDPLDEPNGGNDEAMIFMLSTRSGSLGLNLQ-SADTVIIFDSDFNPHQDIQAMCRC-- 1170 Query: 154 TRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + G K V V+ I + ++EL+ QR + K TI D ++ A Sbjct: 1171 ---HRIGQKNIVKVFRFITLSGVEELIFQRAQDKLTINDKVIQA 1211 >gi|156741590|ref|YP_001431719.1| helicase domain-containing protein [Roseiflexus castenholzii DSM 13941] gi|156232918|gb|ABU57701.1| helicase domain protein [Roseiflexus castenholzii DSM 13941] Length = 1129 Score = 71.9 bits (175), Expect = 5e-11, Method: Composition-based stats. Identities = 34/162 (20%), Positives = 70/162 (43%), Gaps = 23/162 (14%) Query: 48 WKEVHDEKI----KALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQ----------GRT 93 ++ ++ K+ +AL + E+ A I++ L L++ G Sbjct: 468 IEQENEVKLRHFRQALRTLQEQDPGAKILIFTESRDTLDYLERRMRDWGYRVCTIHGGMP 527 Query: 94 LDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGV 153 LD + + + ++ A + G G+NLQ+ ++++ + + W+ +Q + RI Sbjct: 528 LDARIEAEKTFKN-EAQVMVA-TEAAGEGINLQF-CHLMINYDIPWNPNRLEQRMGRI-- 582 Query: 154 TRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTK-STIQDLL 194 + G R V ++ L+A +T + VL RL K I+ L Sbjct: 583 ---HRYGQTREVTIFNLVAADTREGRVLHRLFEKLDEIRSAL 621 >gi|311899397|dbj|BAJ31805.1| hypothetical protein KSE_60370 [Kitasatospora setae KM-6054] Length = 776 Score = 71.9 bits (175), Expect = 5e-11, Method: Composition-based stats. Identities = 29/161 (18%), Positives = 63/161 (39%), Gaps = 27/161 (16%) Query: 53 DEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQKAFPQGRTL---------------- 94 K++ L + +A + ++V +F LA ++ A Sbjct: 582 SAKLRRLRELTAEAAESGHKVVVFSYFREVLAAVRDALGAAGGGDSGSGSTVVGTIAGSL 641 Query: 95 --DKDPCTIQEWNEGK-IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERI 151 ++ + E+ + +L + G GLNLQ N+++ Q + R Sbjct: 642 PAEQRQELVDEFTAVQGHAVLLCQIQAGGLGLNLQ-AANVVILCEPQLKPTLEDQAVAR- 699 Query: 152 GVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQD 192 ++ G R V V+ L+A +++D +++ L+ K+ + D Sbjct: 700 ----AQRMGQIRRVRVHRLLASDSLDHRLVELLKGKAELFD 736 >gi|255541636|ref|XP_002511882.1| Chromo domain protein, putative [Ricinus communis] gi|223549062|gb|EEF50551.1| Chromo domain protein, putative [Ricinus communis] Length = 2248 Score = 71.9 bits (175), Expect = 5e-11, Method: Composition-based stats. Identities = 32/168 (19%), Positives = 61/168 (36%), Gaps = 28/168 (16%) Query: 27 SKTVKCLQL---ANGAV----YYDEEKHWKEVHDE-KIKALEVIIEKAN--AAPIIVAYH 76 + +C++L N + Y+++ V K+ L+ I+ K +++ Sbjct: 1299 TLNNRCMELRKACNHPLLNYPYFNDFSKDFLVRSCGKLWILDRILIKLQRTGHRVLLFST 1358 Query: 77 FNSDLA---------RLQKAFPQGRT-LDKDPCTIQEWNEGK--IPLLFAHPASCGHGLN 124 L RL G T L+ I ++N + + G GLN Sbjct: 1359 MTKLLDILEEYLQWRRLVYRRIDGTTSLEDRESAIVDFNSPDSDCFIFLLSIRAAGRGLN 1418 Query: 125 LQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIA 172 LQ + ++ + + + +Q + R + G KR V V Y+ A Sbjct: 1419 LQ-SADTVIIYDPDPNPKNEEQAVAR-----AHRIGQKREVKVIYMEA 1460 >gi|195492235|ref|XP_002093904.1| GE21549 [Drosophila yakuba] gi|194180005|gb|EDW93616.1| GE21549 [Drosophila yakuba] Length = 1272 Score = 71.9 bits (175), Expect = 5e-11, Method: Composition-based stats. Identities = 32/175 (18%), Positives = 67/175 (38%), Gaps = 24/175 (13%) Query: 44 EEKHWKEVHDEKIKALEVIIEKANA----APIIVAYHFNSDLARLQKAFPQGRTLDKDPC 99 K KI ++ ++ K II+ + + L + +A ++ C Sbjct: 1096 AHKSIIGDFSTKISSVVELVLKIKGDNEQEKIIIFSQWQAILIEIARALSLNGIHFRNKC 1155 Query: 100 TIQEWNEGKIPL-----LFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 T +++ + K P L + GLNL + + + + +Q I RI Sbjct: 1156 TNKDFEDFKNPFSNVTCLLMPLSKGSKGLNLIEATH-VFLVEPILNPGDERQAIGRI--- 1211 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKS---------TIQDLLLNALKK 200 + G K+ V+ I T++E +L + + ++++ L++LKK Sbjct: 1212 --HRFGQKKPTKVHRFIVNGTVEENILSLITSADDTTTLSTHWDLENMTLDSLKK 1264 >gi|73984292|ref|XP_533335.2| PREDICTED: similar to zinc finger, RAN-binding domain containing 3 [Canis familiaris] Length = 1075 Score = 71.9 bits (175), Expect = 5e-11, Method: Composition-based stats. Identities = 34/167 (20%), Positives = 65/167 (38%), Gaps = 20/167 (11%) Query: 49 KEVHDEKIKALEVIIE---KANAAPIIVAYHFNSDLARLQKAFPQGRTL----------- 94 K+ K A++ I+ + ++ +V H S L +A + +T Sbjct: 317 KQTAIAKAGAVKDYIKMMLQNDSLKFLVFAHHLSMLQACTEAVIESKTRYIRIDGSVPSS 376 Query: 95 DKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 ++ Q + + + G GL +VF L+WD +Q +R Sbjct: 377 ERIHLVNQFQKDPDTRVAILSIQAAGQGLTFT-AATYVVFAELYWDPGHIKQAEDR---- 431 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 + G +V ++YL+A T+D L+ L K+ + LN K++ Sbjct: 432 -AHRIGQCSSVNIHYLVANGTLDTLMWGMLNRKTQVTGSTLNGRKEQ 477 >gi|307111780|gb|EFN60014.1| hypothetical protein CHLNCDRAFT_56509 [Chlorella variabilis] Length = 1238 Score = 71.9 bits (175), Expect = 5e-11, Method: Composition-based stats. Identities = 35/178 (19%), Positives = 60/178 (33%), Gaps = 37/178 (20%) Query: 26 ASKTVKCLQL---ANGAVYYDEEKHWKEVHD-----EKIKALEVIIEKAN--AAPIIVAY 75 AS KC++L N + + W K+ L+ ++ K +++ Sbjct: 713 ASLNNKCMELRKVCNHPMLSYPPETWAVGDAIVRQCGKMLVLDRLLVKMKVTGHRVLLFS 772 Query: 76 HFNSDLARL------------------QKAFPQGRT-LDKDPCTIQEWNEGKIP--LLFA 114 L L Q G T L+ IQ++N P + Sbjct: 773 TMTKLLDLLEVYLRWRQLPEHLGGGTMQYLRIDGSTALEDRESAIQQFNAKDSPAFIFLL 832 Query: 115 HPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIA 172 + G GLNLQ + +V + + + +Q I R + G + V V +L A Sbjct: 833 SIRAAGRGLNLQ-SSDTVVIYDPDPNPKNEEQAIAR-----SHRIGQTKEVRVIHLEA 884 >gi|226225594|ref|YP_002759700.1| helicase [Gemmatimonas aurantiaca T-27] gi|226088785|dbj|BAH37230.1| helicase [Gemmatimonas aurantiaca T-27] Length = 1150 Score = 71.9 bits (175), Expect = 5e-11, Method: Composition-based stats. Identities = 23/96 (23%), Positives = 38/96 (39%), Gaps = 12/96 (12%) Query: 113 FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIA 172 P G GL L N +V + WW+ Q +R + G + V VYYL+ Sbjct: 909 VLSPFVAGVGLTLTE-ANHVVHYGRWWNPAIENQATDR-----AHRIGQTKPVHVYYLLG 962 Query: 173 ------QNTIDELVLQRLRTKSTIQDLLLNALKKET 202 Q + DE + LR + + L+ + ++ Sbjct: 963 TYRAPEQRSFDEALDDLLRERRDLAHDFLSPVTEDA 998 >gi|242762396|ref|XP_002340369.1| nucleosome remodeling complex ATPase subunit (Snf2h), putative [Talaromyces stipitatus ATCC 10500] gi|218723565|gb|EED22982.1| nucleosome remodeling complex ATPase subunit (Snf2h), putative [Talaromyces stipitatus ATCC 10500] Length = 534 Score = 71.9 bits (175), Expect = 5e-11, Method: Composition-based stats. Identities = 25/140 (17%), Positives = 49/140 (35%), Gaps = 20/140 (14%) Query: 53 DEKIKALEVIIEKA---NAAPIIVAYHFNSDL---------ARLQKAFPQGRT-LDKDPC 99 K L+ ++E+ + I++ F+ L + G T Sbjct: 401 SSKFILLKRLLEQEVTKDRKKILIFSGFDYALNCCEALLAAMGISCLRLDGNTCYSLRRY 460 Query: 100 TIQEW-NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQ 158 I + NE + + + G G+ L ++VF + W+ + Q R + Sbjct: 461 NIHRFRNESECKVFIMATRAGGEGITLT-AAEVVVFLDMDWNPQVTAQAEAR-----AYR 514 Query: 159 AGFKRAVFVYYLIAQNTIDE 178 G + V +Y L T++E Sbjct: 515 LGQTKPVTIYKLCTSGTVEE 534 >gi|19074332|ref|NP_585838.1| BELONGS TO THE SNF2/RAD54 HELICASE FAMILY [Encephalitozoon cuniculi GB-M1] gi|19068974|emb|CAD25442.1| BELONGS TO THE SNF2/RAD54 HELICASE FAMILY [Encephalitozoon cuniculi GB-M1] Length = 556 Score = 71.9 bits (175), Expect = 5e-11, Method: Composition-based stats. Identities = 38/147 (25%), Positives = 64/147 (43%), Gaps = 19/147 (12%) Query: 59 LEVIIEKANAAPIIVAYHFNSDLARLQKAF-----PQGRTLDKDPCT-----IQEWNEGK 108 L ++EK +V H + L+ F P R P T ++++ E + Sbjct: 387 LATMVEK--GMKFVVFCHHTEMMESLEGFFAERNVPMIRIDGSVPSTSRHLLVKKFQENE 444 Query: 109 -IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFV 167 + + +C GL L G +VF L+W+ Q +RI + G K +V + Sbjct: 445 EVMVALLSITACSTGLTLT-AGRAVVFAELYWNPGVLLQAEDRI-----HRIGQKSSVDI 498 Query: 168 YYLIAQNTIDELVLQRLRTKSTIQDLL 194 YL+A+ TIDE V +L +K + + L Sbjct: 499 IYLVAKGTIDEYVWPKLLSKLNVLESL 525 >gi|46126713|ref|XP_387910.1| hypothetical protein FG07734.1 [Gibberella zeae PH-1] Length = 918 Score = 71.9 bits (175), Expect = 6e-11, Method: Composition-based stats. Identities = 31/174 (17%), Positives = 57/174 (32%), Gaps = 26/174 (14%) Query: 34 QLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQ--- 90 QL AV K V D K+ E +V + L ++ Q Sbjct: 732 QLRTAAV-APPSKIRSLVDDIKLSPPE--------TKCVVFSTWRLTLDLVKGVLDQEGI 782 Query: 91 ------GRTLDKDPC-TIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLE 142 G+ KD ++ + + I ++ GL L W+ Sbjct: 783 QSIRFDGKVPQKDRQSVVKRFESDPNIRIMLLTLTCGAVGLTLT-AACRAYLMEPHWNPT 841 Query: 143 EHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 +Q + RI + G + V L +++ +E V+ +K + +LL+ Sbjct: 842 LEEQALARI-----HRLGQTKNVTTIRLYIRDSFEEQVMNVQESKKQLAGVLLS 890 >gi|322830312|gb|EFZ33384.1| SNF2 DNA repair protein, putative [Trypanosoma cruzi] Length = 1086 Score = 71.5 bits (174), Expect = 6e-11, Method: Composition-based stats. Identities = 34/184 (18%), Positives = 67/184 (36%), Gaps = 29/184 (15%) Query: 28 KTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHF---NSDLA 82 +CL L + + K+ L I+ I+ + ++ Sbjct: 858 LIDECLSLVSSGFLTE-----FVGLSGKMTVLISILHSIREKKEKAIIFSQYVGSQDFIS 912 Query: 83 RLQKAFPQGRTL-------DKDPCTIQEWNEG-KIPLLFAHPASCGHGLNLQYGGNILVF 134 R +F + ++ TI+++ E KI L +GL+ +++++ Sbjct: 913 RTLTSFDIVSSTIRGRDCHERRRRTIEKFREDEKITCLLLSTQIGAYGLDFTAANHVILW 972 Query: 135 FSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIA--QNTIDELVLQRLRTKSTIQD 192 WW+ + Q I R + RAV VY L + ++TI VL+ K + Sbjct: 973 -DSWWNPQVESQAIAR-----AYRRNQTRAVIVYRLASEFEDTI---VLKTQIRKLALFR 1023 Query: 193 LLLN 196 ++N Sbjct: 1024 CIMN 1027 >gi|219883149|ref|YP_002478311.1| helicase domain protein [Cyanothece sp. PCC 7425] gi|219867274|gb|ACL47612.1| helicase domain protein [Cyanothece sp. PCC 7425] Length = 894 Score = 71.5 bits (174), Expect = 6e-11, Method: Composition-based stats. Identities = 25/99 (25%), Positives = 41/99 (41%), Gaps = 7/99 (7%) Query: 97 DPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 IQ +NEG+ + G G++LQ + L+ + W+ Q + R+ Sbjct: 519 RERAIQLFNEGEAR-FLVSTEAAGEGVDLQQNCHTLIHVDIPWNPMRLHQRVGRL----- 572 Query: 157 RQAGFKRAVFVYYLIAQNTIDELVLQRLRTK-STIQDLL 194 + G V V L +TI+ + +RL K IQ L Sbjct: 573 YRYGQTHKVEVVTLRNPDTIEATIWERLEEKMQRIQLAL 611 >gi|308811198|ref|XP_003082907.1| SNF2 domain-containing protein / helicase domain-containing protein (ISS) [Ostreococcus tauri] gi|116054785|emb|CAL56862.1| SNF2 domain-containing protein / helicase domain-containing protein (ISS) [Ostreococcus tauri] Length = 596 Score = 71.5 bits (174), Expect = 6e-11, Method: Composition-based stats. Identities = 29/162 (17%), Positives = 58/162 (35%), Gaps = 17/162 (10%) Query: 53 DEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLD----------KDPCTIQ 102 + LE +I+ + + I H L + + + + Sbjct: 363 NAVCDYLETLIDGSASEKFIFFAHHGVMLDAVSAFLEKKKCKHIRIDGSTPSAARGDLVN 422 Query: 103 EWNEGK-IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGF 161 ++ + + G GL L + ++F + W + Q +R + G Sbjct: 423 KFQRDDSTRIAVLSIKAAGMGLTLT-AASTVIFGEMVWTPGDLIQAEDR-----AHRIGQ 476 Query: 162 KRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETI 203 +V V YL A++TIDE++ Q +R K +LN + + Sbjct: 477 ASSVLVQYLHARDTIDEIIWQTIRRKLDTLGTVLNGQSGDHL 518 >gi|24659216|ref|NP_648034.1| CG7376 [Drosophila melanogaster] gi|7295362|gb|AAF50680.1| CG7376 [Drosophila melanogaster] Length = 1270 Score = 71.5 bits (174), Expect = 6e-11, Method: Composition-based stats. Identities = 36/175 (20%), Positives = 69/175 (39%), Gaps = 24/175 (13%) Query: 44 EEKHWKEVHDEKIKALEVIIEKANAA----PIIVAYHFNSDLARLQKAFPQGRTLDKDPC 99 K KI ++ ++ K IIV + + L + +A ++ C Sbjct: 1095 AHKSIIGDFSTKISSVVELVLKIKGENEQEKIIVFSQWQAILIEIARALSLNGIQFRNKC 1154 Query: 100 TIQEWNEGKIPL-----LFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 T +++++ K PL L + GLNL + + + + +Q I RI Sbjct: 1155 TNKDFDDFKNPLSNVTCLLMPLSKGSKGLNLIEATH-VFLVEPILNPGDERQAIGRI--- 1210 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKS---------TIQDLLLNALKK 200 + G KR V+ I TI+E +L + + ++++ L++LKK Sbjct: 1211 --HRFGQKRPTKVHRFIVNETIEENILSLITSADDTTTLSTHWDLENMTLDSLKK 1263 >gi|119479149|ref|XP_001259603.1| helicase, putative [Neosartorya fischeri NRRL 181] gi|119407757|gb|EAW17706.1| helicase, putative [Neosartorya fischeri NRRL 181] Length = 565 Score = 71.5 bits (174), Expect = 6e-11, Method: Composition-based stats. Identities = 40/200 (20%), Positives = 78/200 (39%), Gaps = 30/200 (15%) Query: 25 SASKTVKCLQLANGAVYYDEEKHWKE-----VHDEKIKALEVIIE----KANAAPIIVAY 75 +A++ + Q + DEE W + K+ + ++ + A ++V Sbjct: 294 TAAQRSRMKQTGDEQQNEDEELDWISAAQGGMPGAKVDKVRELVANWVREDPDAKVVVFT 353 Query: 76 HFNSDLARL------------QKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGL 123 F D R+ + + +D + + ++ ++ A + G GL Sbjct: 354 QF-LDFVRIFSSICTKEGWAHCRLTGKMSIGARDSSMNEFREKREVKVMIASLMAGGTGL 412 Query: 124 NLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQR 183 ++ N + LWW+ QQ R+ + G ++ V V +I QNTID+ +LQ Sbjct: 413 DMSM-ANKCILVDLWWNEAVQQQAFCRL-----YRIGQEKVVEVVKIIVQNTIDDYILQL 466 Query: 184 LRTKSTIQDLLL--NALKKE 201 KS + + AL+K Sbjct: 467 QTKKSANINSTIGEEALQKR 486 >gi|148549817|ref|YP_001269919.1| non-specific serine/threonine protein kinase [Pseudomonas putida F1] gi|148513875|gb|ABQ80735.1| Non-specific serine/threonine protein kinase [Pseudomonas putida F1] Length = 1082 Score = 71.5 bits (174), Expect = 6e-11, Method: Composition-based stats. Identities = 33/209 (15%), Positives = 74/209 (35%), Gaps = 31/209 (14%) Query: 14 DLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIK----ALEVIIEKANAA 69 ++ + + + + L+L Y + + K++ LE I N Sbjct: 864 QIEEQLDQKTSGMLGLLHRLKLICAHPYSVQPDTRLRDNSPKLQWLIQTLESIKRAGNGD 923 Query: 70 PIIVAYHFNSDLARLQKAFPQ----------------GRTLDKDPCTIQEWNE-GKIPLL 112 +IV LQ A Q ++ + I ++ E ++ Sbjct: 924 KVIVFTELRDIQRELQHAIQQHFGFRATVINGDTSTSSQSANSRQRLIDQFQELPGFAVI 983 Query: 113 FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIA 172 + G G+N+Q N ++ F+ W+ + Q +R + G ++ V+VYY Sbjct: 984 ILSTIAVGFGVNVQ-AANHVIHFTRCWNPAKEDQATDR-----AYRIGQQKDVYVYYPTV 1037 Query: 173 QN----TIDELVLQRLRTKSTIQDLLLNA 197 ++ T + + + L + + +L+ Sbjct: 1038 RDAAMPTFEATLDELLSKRRALARDMLSG 1066 >gi|301384370|ref|ZP_07232788.1| SNF2-related:helicase, C-terminal [Pseudomonas syringae pv. tomato Max13] Length = 222 Score = 71.5 bits (174), Expect = 6e-11, Method: Composition-based stats. Identities = 28/154 (18%), Positives = 58/154 (37%), Gaps = 18/154 (11%) Query: 55 KIKALEVIIEKAN-AAPIIVAYHFNSDLARLQKAFPQGRT----------LDKDPCTIQE 103 K++ + ++ + + +I+ + +A L++ + K I Sbjct: 60 KVRIVADLMAELDVDDKVILFCEYQESVATLREHCLKMGIGCVTLVGSDSPKKRQKAIDA 119 Query: 104 WN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFK 162 + + + ++ G G NL N + F L W Q +R + G Sbjct: 120 FQQDPDCRVFIGTRSAAGTGYNLT-AANYVFFLGLPWTPGLQDQAEDR-----AYRNGQL 173 Query: 163 RAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 R V V +A++TID+ + Q L K + L++ Sbjct: 174 RMVVVKIPLAEDTIDQQLWQMLMDKRALASDLID 207 >gi|284029135|ref|YP_003379066.1| helicase domain-containing protein [Kribbella flavida DSM 17836] gi|283808428|gb|ADB30267.1| helicase domain protein [Kribbella flavida DSM 17836] Length = 708 Score = 71.5 bits (174), Expect = 6e-11, Method: Composition-based stats. Identities = 25/102 (24%), Positives = 43/102 (42%), Gaps = 7/102 (6%) Query: 97 DPCTIQEW-NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTR 155 I + N+ + + + G GLNLQ N +V L W E Q I+R+ Sbjct: 585 RQKNIDAFVNDAGVAIAVCSLLTAGVGLNLQVASN-VVLAELSWTNAEQTQAIDRV---- 639 Query: 156 QRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + G + V + +IA TID + + K+ + + L+ Sbjct: 640 -HRIGQEEPVTAWRIIAAQTIDTRIADLIDAKAGLAAMALDG 680 >gi|262113299|emb|CBH29315.1| superfamily II DNA/RNA helicase, SNF2 family [uncultured bacterium] Length = 129 Score = 71.5 bits (174), Expect = 7e-11, Method: Composition-based stats. Identities = 19/90 (21%), Positives = 37/90 (41%), Gaps = 6/90 (6%) Query: 81 LARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWD 140 L + ++ G+T ++ Q N+ +I + + G GLNL + + WW+ Sbjct: 11 LRDIPFSYLTGQTTNRSKVVEQFQNDDQIRVFLISLKAGGIGLNLTQ-ADYVYLIDPWWN 69 Query: 141 LEEHQQMIERIGVTRQRQAGFKRAVFVYYL 170 Q I+R+ + G ++ V L Sbjct: 70 PAVENQAIDRV-----YRIGQQKNVVAVRL 94 >gi|242063742|ref|XP_002453160.1| hypothetical protein SORBIDRAFT_04g001010 [Sorghum bicolor] gi|241932991|gb|EES06136.1| hypothetical protein SORBIDRAFT_04g001010 [Sorghum bicolor] Length = 2166 Score = 71.5 bits (174), Expect = 7e-11, Method: Composition-based stats. Identities = 32/166 (19%), Positives = 58/166 (34%), Gaps = 27/166 (16%) Query: 28 KTVKCLQL---ANGAVYY----DEEKHWKEVHDEKIKALEVIIEKAN--AAPIIVAYHFN 78 KC++L N + + K + K+ L+ I+ K + +++ Sbjct: 1258 LNNKCMELRKVCNHPLLTYPFLNHGKDFMIRSCGKLWNLDRILIKLHKAGHRVLLFSTMT 1317 Query: 79 SDLA---------RLQKAFPQGRT-LDKDPCTIQEWNEG--KIPLLFAHPASCGHGLNLQ 126 L RL G T L+ I ++N + + G GLNLQ Sbjct: 1318 KLLDIMEDYLQWRRLVYRRIDGTTSLEDRESAIVDFNRPGSDCFIFLLSIRAAGRGLNLQ 1377 Query: 127 YGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIA 172 + +V + + + +Q + R + G R V V Y+ A Sbjct: 1378 -SADTVVIYDPDPNPQNEEQAVAR-----AHRIGQTREVKVIYMEA 1417 >gi|260823378|ref|XP_002604160.1| hypothetical protein BRAFLDRAFT_119758 [Branchiostoma floridae] gi|229289485|gb|EEN60171.1| hypothetical protein BRAFLDRAFT_119758 [Branchiostoma floridae] Length = 761 Score = 71.5 bits (174), Expect = 7e-11, Method: Composition-based stats. Identities = 25/148 (16%), Positives = 50/148 (33%), Gaps = 35/148 (23%) Query: 52 HDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKI 109 K+ L+ ++ K ++V L LQ Sbjct: 251 ASGKLFLLDQLLSYLKKKGHKVLVFSQMTRVLDILQDYLGYR------------------ 292 Query: 110 PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYY 169 G GLNL + ++F ++ + Q R + G R V + Sbjct: 293 ---------GGQGLNL-ASADTVIFMDSDFNPQNDLQAAAR-----AHRIGQTRPVKIIR 337 Query: 170 LIAQNTIDELVLQRLRTKSTIQDLLLNA 197 LI ++T++E++L+R K + + ++ Sbjct: 338 LIGRSTVEEIILKRAEAKLKLTNSVIEG 365 >gi|16197925|gb|AAL13727.1| LD03886p [Drosophila melanogaster] Length = 558 Score = 71.5 bits (174), Expect = 7e-11, Method: Composition-based stats. Identities = 36/175 (20%), Positives = 69/175 (39%), Gaps = 24/175 (13%) Query: 44 EEKHWKEVHDEKIKALEVIIEKANAA----PIIVAYHFNSDLARLQKAFPQGRTLDKDPC 99 K KI ++ ++ K IIV + + L + +A ++ C Sbjct: 383 AHKSIIGDFSTKISSVVELVLKIKGENEQEKIIVFSQWQAILIEIARALSLNGIQFRNKC 442 Query: 100 TIQEWNEGKIPL-----LFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 T +++++ K PL L + GLNL + + + + +Q I RI Sbjct: 443 TNKDFDDFKNPLSNVTCLLMPLSKGSKGLNLIEATH-VFLVEPILNPGDERQAIGRI--- 498 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKS---------TIQDLLLNALKK 200 + G KR V+ I TI+E +L + + ++++ L++LKK Sbjct: 499 --HRFGQKRPTKVHRFIVNETIEENILSLITSADDTTTLSTHWDLENMTLDSLKK 551 >gi|119632037|gb|EAX11632.1| zinc finger, RAN-binding domain containing 3, isoform CRA_d [Homo sapiens] Length = 458 Score = 71.5 bits (174), Expect = 7e-11, Method: Composition-based stats. Identities = 35/168 (20%), Positives = 66/168 (39%), Gaps = 20/168 (11%) Query: 49 KEVHDEKIKALEVIIE---KANAAPIIVAYHFNSDLARLQKAFPQGRTL----------- 94 K+ K A++ I+ + ++ +V H S L +A + +T Sbjct: 261 KQTAIAKAGAVKDYIKMMLQNDSLKFLVFAHHLSMLQACTEAVIENKTRYIRIDGSVSSS 320 Query: 95 DKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 ++ Q + + + G GL + +VF L+WD +Q +R Sbjct: 321 ERIHLVNQFQKDPDTRVAILSIQAAGQGLTFT-AASHVVFAELYWDPGHIKQAEDR---- 375 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKET 202 + G +V ++YLIA T+D L+ L K+ + LN K++ Sbjct: 376 -AHRIGQCSSVNIHYLIANGTLDTLMWGMLNRKAQVTGSTLNGRKEKI 422 >gi|297849318|ref|XP_002892540.1| hypothetical protein ARALYDRAFT_888252 [Arabidopsis lyrata subsp. lyrata] gi|297338382|gb|EFH68799.1| hypothetical protein ARALYDRAFT_888252 [Arabidopsis lyrata subsp. lyrata] Length = 598 Score = 71.5 bits (174), Expect = 7e-11, Method: Composition-based stats. Identities = 24/160 (15%), Positives = 54/160 (33%), Gaps = 18/160 (11%) Query: 43 DEEKHWKEVHDEKIKALEV----IIEKANAAPIIVAYHFNSDLARLQKAFPQGRTL---- 94 D KI+AL ++ +A ++ + S L +++ + Sbjct: 420 DTNSIILRSSCTKIEALREEITWMLGTDESAKAVIFSRYKSFLELIERQLTKSGLRCVKL 479 Query: 95 ----DKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 D + +G+ +L G L+L + + W+ +Q + R Sbjct: 480 SESADGKAALQRFKEDGQCKILLTTFEIVGDLLDLSVASH-VFLMDPGWNPITDRQALAR 538 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 + R + + I++ TI+E ++ L+ K Sbjct: 539 VQTVR-----QSKPTRMVKFISKGTIEEKIIDVLQEKQNT 573 >gi|145348662|ref|XP_001418764.1| predicted protein [Ostreococcus lucimarinus CCE9901] gi|144578994|gb|ABO97057.1| predicted protein [Ostreococcus lucimarinus CCE9901] Length = 1156 Score = 71.5 bits (174), Expect = 7e-11, Method: Composition-based stats. Identities = 27/138 (19%), Positives = 52/138 (37%), Gaps = 19/138 (13%) Query: 58 ALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRT-LDKDPCTIQEWNEG--KIPLLFA 114 L ++E + D L+ G T L++ I ++N + Sbjct: 813 KLLDLLE-----NYLQWRWTTPDGQDLKYCRIDGNTSLEQREIAINDFNAPHSDKFIFLL 867 Query: 115 HPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQN 174 + G GLNLQ + +V + + + +Q I R + G R V V + A Sbjct: 868 SIRAAGRGLNLQT-ADTVVVYDPDPNPKNEEQAIAR-----AHRIGQTREVRVIHFEA-- 919 Query: 175 TIDELVLQRLR--TKSTI 190 +D+ ++Q+ + K + Sbjct: 920 -VDDDIVQKKKGSKKEEV 936 >gi|289618249|emb|CBI54973.1| unnamed protein product [Sordaria macrospora] Length = 273 Score = 71.5 bits (174), Expect = 7e-11, Method: Composition-based stats. Identities = 34/178 (19%), Positives = 62/178 (34%), Gaps = 30/178 (16%) Query: 28 KTVKCLQL---ANGAVYYDEEKHWKEVHDEKIK----ALEVIIEKANAAPIIVAYH--FN 78 +T KCL L +Y ++++D + AL+ I+ N + Y+ F Sbjct: 96 RTDKCLDLPPSTATTIYQTLSDQEQKLYDAILSRAKWALDDIV-SGNDKGALKLYNVLFT 154 Query: 79 SDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLW 138 + L + + + + AHP LNL ++ V Sbjct: 155 ATLK--MRMMKAAKIFSSAQTAAVLF------VPIAHP------LNLTAASHVHV-VEPH 199 Query: 139 WDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 W+ Q I R + G + V V I + T++E ++ K T+ L + Sbjct: 200 WNPSVEAQAIAR-----AIRMGQMKNVIVTRYIMKGTVEESIVALQTKKQTLAKLTFD 252 >gi|156093697|ref|XP_001612887.1| helicase [Plasmodium vivax SaI-1] gi|148801761|gb|EDL43160.1| helicase, putative [Plasmodium vivax] Length = 1618 Score = 71.5 bits (174), Expect = 7e-11, Method: Composition-based stats. Identities = 23/92 (25%), Positives = 41/92 (44%), Gaps = 6/92 (6%) Query: 106 EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 + + S GLNLQ + ++ F ++ + Q + R + G K V Sbjct: 1118 HDETMIFMLSTRSGSLGLNLQT-ADTVIIFDSDFNPHQDIQAMCRC-----HRIGQKNVV 1171 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 V+ I + ++EL+ QR + K TI D ++ A Sbjct: 1172 KVFRFITLSGVEELIFQRAQDKLTINDKVIQA 1203 >gi|297824661|ref|XP_002880213.1| ATBRM/CHR2 [Arabidopsis lyrata subsp. lyrata] gi|297326052|gb|EFH56472.1| ATBRM/CHR2 [Arabidopsis lyrata subsp. lyrata] Length = 2186 Score = 71.5 bits (174), Expect = 7e-11, Method: Composition-based stats. Identities = 32/168 (19%), Positives = 61/168 (36%), Gaps = 28/168 (16%) Query: 27 SKTVKCLQL---ANGAV----YYDEEKHWKEVHDE-KIKALEVIIEKAN--AAPIIVAYH 76 + +C++L N + Y+++ V K+ L+ I+ K +++ Sbjct: 1266 TLNNRCMELRKACNHPLLNYPYFNDFSKDFLVRSCGKLWILDRILIKLQRTGHRVLLFST 1325 Query: 77 FNSDLA---------RLQKAFPQGRT-LDKDPCTIQEWNEGKIP--LLFAHPASCGHGLN 124 L RL G T L+ I ++N+ + + G GLN Sbjct: 1326 MTKLLDILEEYLQWRRLVYRRIDGTTSLEDRESAIVDFNDPDTDCFIFLLSIRAAGRGLN 1385 Query: 125 LQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIA 172 LQ + +V + + + +Q + R + G R V V Y+ A Sbjct: 1386 LQT-ADTVVIYDPDPNPKNEEQAVAR-----AHRIGQTREVKVIYMEA 1427 >gi|40882196|emb|CAF06022.1| related to regulator of chromatin [Neurospora crassa] Length = 451 Score = 71.5 bits (174), Expect = 7e-11, Method: Composition-based stats. Identities = 28/149 (18%), Positives = 51/149 (34%), Gaps = 18/149 (12%) Query: 51 VHDEKIKAL-EVIIEKANAAP--IIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEG 107 + K+KA+ + ++E VA + + RT DP Sbjct: 297 LFSTKLKAVRKQVLEAGTGTKQDAGVAALLVHGKTSISERTRLIRTFQGDPQAF------ 350 Query: 108 KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFV 167 +L + GLNL ++ V W+ Q I R + G + V V Sbjct: 351 ---ILIMSVGTGAVGLNLTAASHVHV-VEPHWNPSVEAQAIAR-----AVRMGQTKNVLV 401 Query: 168 YYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 I + T+++ ++ K T+ L + Sbjct: 402 TRYIMKRTVEDNIVALQTKKQTLAKLTFD 430 >gi|313901547|ref|ZP_07834991.1| SNF2-related protein [Thermaerobacter subterraneus DSM 13965] gi|313468186|gb|EFR63656.1| SNF2-related protein [Thermaerobacter subterraneus DSM 13965] Length = 524 Score = 71.5 bits (174), Expect = 7e-11, Method: Composition-based stats. Identities = 34/154 (22%), Positives = 63/154 (40%), Gaps = 20/154 (12%) Query: 53 DEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLD----------KDPCTIQ 102 + K LE ++EK + P++V F + L + + + Sbjct: 318 NHKALMLERLVEKLDE-PVVVFTEFRATQDYLARRLRRAGVETVIYHGAMGACERDAAKA 376 Query: 103 EWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFK 162 + +G + G GLNLQ+ N +V + L W+ +Q I R+ + G + Sbjct: 377 RFRKGAR--VLISTECGGQGLNLQFCRN-VVNYDLPWNPMRVEQRIGRV-----HRLGQE 428 Query: 163 -RAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 V V+ L A+ TI+E +L+ L K + ++ Sbjct: 429 AETVRVFNLYARRTIEEYILRLLDEKINLFRQVI 462 >gi|117926000|ref|YP_866617.1| helicase domain-containing protein [Magnetococcus sp. MC-1] gi|117609756|gb|ABK45211.1| helicase domain protein [Magnetococcus sp. MC-1] Length = 1170 Score = 71.5 bits (174), Expect = 7e-11, Method: Composition-based stats. Identities = 37/196 (18%), Positives = 77/196 (39%), Gaps = 22/196 (11%) Query: 17 GENIEAFNSASKTVKCLQL-ANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAY 75 + I+ + +T++ L++ A V+ +++ W+E+ + E+ + +I+ Sbjct: 455 AQTIQELEAEIETLRLLEMQAKLVVHSGKDRKWEELSSLLQEKPEMFSASGHRRKMIIFT 514 Query: 76 HFNSDLARLQKAFP-------------QGRTLDKDPCTIQEW-NEGKIPLLFAHPASCGH 121 L L++ G D +E+ N + +L A + G Sbjct: 515 EHKDTLNYLRERIGSLLGAPGAVVVIHGGVNRDDRRKIQEEFRNNPDVLILLA-TDAAGE 573 Query: 122 GLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVL 181 G+NLQ N++V + L W+ +Q RI + G ++ ++A T + V Sbjct: 574 GVNLQN-ANLMVNYDLPWNPNRLEQRFGRI-----HRIGQTEVCHLWNIVAHGTREGEVF 627 Query: 182 QRLRTKSTIQDLLLNA 197 +L K I+ L Sbjct: 628 TKLLEKLEIERAALGG 643 >gi|71662347|ref|XP_818182.1| SNF2 DNA repair protein [Trypanosoma cruzi strain CL Brener] gi|70883417|gb|EAN96331.1| SNF2 DNA repair protein, putative [Trypanosoma cruzi] Length = 986 Score = 71.5 bits (174), Expect = 7e-11, Method: Composition-based stats. Identities = 33/184 (17%), Positives = 67/184 (36%), Gaps = 29/184 (15%) Query: 28 KTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHF---NSDLA 82 +CL L + + K+ L I+ I+ + ++ Sbjct: 758 LIDECLSLVSSGFLTE-----FVGLSGKMTVLISILHSIREKKEKAIIFSQYVGSQDFIS 812 Query: 83 RLQKAFPQGRTL-------DKDPCTIQEWNEGK-IPLLFAHPASCGHGLNLQYGGNILVF 134 R +F + ++ TI+++ E + I L +GL+ +++++ Sbjct: 813 RTLTSFDIVSSTIRGRDCHERRRRTIEKFREDENITCLLLSTQIGAYGLDFTAANHVILW 872 Query: 135 FSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIA--QNTIDELVLQRLRTKSTIQD 192 WW+ + Q I R + RAV VY L + ++TI VL+ K + Sbjct: 873 -DSWWNPQVESQAIAR-----AYRRNQTRAVIVYRLASEFEDTI---VLKTQIRKLALFR 923 Query: 193 LLLN 196 ++N Sbjct: 924 CIMN 927 >gi|257486838|ref|ZP_05640879.1| SNF2-related:helicase, C-terminal [Pseudomonas syringae pv. tabaci ATCC 11528] Length = 650 Score = 71.1 bits (173), Expect = 7e-11, Method: Composition-based stats. Identities = 28/154 (18%), Positives = 58/154 (37%), Gaps = 18/154 (11%) Query: 55 KIKALEVIIEKAN-AAPIIVAYHFNSDLARLQKA----------FPQGRTLDKDPCTIQE 103 K++ + ++ + + +I+ + +A L++ + K I Sbjct: 488 KVRIVADLMAELDVDDKVILFCEYQESVASLREHCLAMGVGCVTLVGSDSPKKRQKAIDA 547 Query: 104 WNEG-KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFK 162 + + + ++ G G NL N + F L W Q +R + G Sbjct: 548 FQQDQDCRVFIGTRSAAGTGYNLT-AANYVFFLGLPWTPGLQDQAEDR-----AYRNGQL 601 Query: 163 RAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 R V V +A++TID+ + Q L K + L++ Sbjct: 602 RMVVVKIPLAEDTIDQQLWQMLMDKRALASDLID 635 >gi|302325491|gb|ADL24692.1| SNF2/helicase domain protein [Fibrobacter succinogenes subsp. succinogenes S85] Length = 749 Score = 71.1 bits (173), Expect = 8e-11, Method: Composition-based stats. Identities = 35/226 (15%), Positives = 80/226 (35%), Gaps = 37/226 (16%) Query: 1 MKQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 + Y + +RE + E + + ++ +K ++ + EK K + +I + Sbjct: 394 LSNYGEDEREGF---DDEATISVQTLAEPLKLMENEIDHINLLLEKATKVTSETRINRIV 450 Query: 61 VII-EKANAAPIIVAYHFNSDLARLQ------------------KAFPQGRTLDKDPCTI 101 II EK +++ + + + ++ D I Sbjct: 451 EIIKEKYPNDQVLLFTEYKRTQSLMMTELMKVWGDNSVTIINGDESLKDVVYPDGCSRDI 510 Query: 102 --------QEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGV 153 +++N G++ + G G++LQ ++L+ L W+ Q + R+ Sbjct: 511 SISRNDACEKFNNGEVR-FLISTEAAGEGIDLQKNCHVLIHIDLPWNPMRLHQRVGRV-- 567 Query: 154 TRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTK-STIQDLLLNAL 198 + G V V + + I+ + L K IQ +L ++ Sbjct: 568 ---HRLGQTHDVEVVSVRNPDNIESKIWGYLEEKIDQIQKMLSESM 610 >gi|330885778|gb|EGH19927.1| SNF2-related:helicase [Pseudomonas syringae pv. glycinea str. race 4] Length = 652 Score = 71.1 bits (173), Expect = 8e-11, Method: Composition-based stats. Identities = 28/154 (18%), Positives = 58/154 (37%), Gaps = 18/154 (11%) Query: 55 KIKALEVIIEKAN-AAPIIVAYHFNSDLARLQKA----------FPQGRTLDKDPCTIQE 103 K++ + ++ + + +I+ + +A L++ + K I Sbjct: 488 KVRIVADLMAELDVDDKVILFCEYQESVASLREHCLAMGVGCVTLVGSDSPKKRQKAIDA 547 Query: 104 WNEG-KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFK 162 + + + ++ G G NL N + F L W Q +R + G Sbjct: 548 FQQDQDCRVFIGTRSAAGTGYNLT-AANYVFFLGLPWTPGLQDQAEDR-----AYRNGQL 601 Query: 163 RAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 R V V +A++TID+ + Q L K + L++ Sbjct: 602 RMVVVKIPLAEDTIDQQLWQMLMDKRALASDLID 635 >gi|15615380|ref|NP_243683.1| Snf2/Rad54 family helicase [Bacillus halodurans C-125] gi|10175438|dbj|BAB06536.1| helicase (Snf2/Rad54 family) [Bacillus halodurans C-125] Length = 566 Score = 71.1 bits (173), Expect = 8e-11, Method: Composition-based stats. Identities = 29/153 (18%), Positives = 60/153 (39%), Gaps = 21/153 (13%) Query: 54 EKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQ-----GRTLDKDPCTIQEW---- 104 K + +I++ N +I+ + + LQ Q ++W Sbjct: 357 AKAEKALELIQQINDK-VIIFTEYRATQLYLQWYLKQHGISSVPFRGGFKRGKKDWMRQL 415 Query: 105 --NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFK 162 N ++ + G G+NLQ+ + ++ + L W+ +Q I RI + G Sbjct: 416 FENRAQV---LIATEAGGEGINLQF-CHHIINYDLPWNPMRIEQRIGRI-----HRLGQT 466 Query: 163 RAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 V +Y ++TI+E +L L K + + ++ Sbjct: 467 EDVRIYNFAVKDTIEEQILTLLYEKIQLFERVV 499 >gi|289625868|ref|ZP_06458822.1| SNF2-related:helicase, C-terminal [Pseudomonas syringae pv. aesculi str. NCPPB3681] Length = 652 Score = 71.1 bits (173), Expect = 8e-11, Method: Composition-based stats. Identities = 28/154 (18%), Positives = 58/154 (37%), Gaps = 18/154 (11%) Query: 55 KIKALEVIIEKAN-AAPIIVAYHFNSDLARLQKA----------FPQGRTLDKDPCTIQE 103 K++ + ++ + + +I+ + +A L++ + K I Sbjct: 488 KVRIVADLMAELDVDDKVILFCEYQESVASLREHCLAMGVGCVTLVGSDSPKKRQKAIDA 547 Query: 104 WNEG-KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFK 162 + + + ++ G G NL N + F L W Q +R + G Sbjct: 548 FQQDQDCRVFIGTRSAAGTGYNLT-AANYVFFLGLPWTPGLQDQAEDR-----AYRNGQL 601 Query: 163 RAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 R V V +A++TID+ + Q L K + L++ Sbjct: 602 RMVVVKIPLAEDTIDQQLWQMLMDKRALASDLID 635 >gi|195337877|ref|XP_002035552.1| GM14768 [Drosophila sechellia] gi|194128645|gb|EDW50688.1| GM14768 [Drosophila sechellia] Length = 1208 Score = 71.1 bits (173), Expect = 8e-11, Method: Composition-based stats. Identities = 34/174 (19%), Positives = 68/174 (39%), Gaps = 24/174 (13%) Query: 45 EKHWKEVHDEKIKALEVIIEKANAA----PIIVAYHFNSDLARLQKAFPQGRTLDKDPCT 100 K KI ++ ++ K IIV + + L + +A ++ CT Sbjct: 1034 HKSIIGDFSTKIASIVELVLKIKGENEQEKIIVFSQWQAILIEIARALSLNGIQFRNKCT 1093 Query: 101 IQEWNEGKIPL-----LFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTR 155 +++++ K P L + GLNL + + + + +Q I RI Sbjct: 1094 NKDFDDFKNPYSNVTCLLMPLSKGSKGLNLIEATH-VFLVEPILNPGDERQAIGRI---- 1148 Query: 156 QRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKS---------TIQDLLLNALKK 200 + G KR V+ I T++E +L + + ++++ L++LKK Sbjct: 1149 -HRFGQKRPTKVHRFIVNGTVEENILSLITSADDTTTLGTHWDLENMTLDSLKK 1201 >gi|23577840|ref|NP_703032.1| global transactivator [Rachiplusia ou MNPV] gi|23476485|gb|AAN28032.1| global transactivator [Rachiplusia ou MNPV] Length = 505 Score = 71.1 bits (173), Expect = 9e-11, Method: Composition-based stats. Identities = 39/236 (16%), Positives = 80/236 (33%), Gaps = 53/236 (22%) Query: 3 QYHKFQRELYCDLQGENIEAF------NSAS----------KTVKCLQLANGAVYYDEEK 46 Y K + C+ + ++A N+ S +K Q+ +K Sbjct: 266 LYDKLK----CESEEAYVKAVAARETENALSRLQQMQHVLWLILKLRQICCHPYLAMHDK 321 Query: 47 HWKEVH------------DEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQ---G 91 + E + + ++ I+ ++ I+V + L + F Q Sbjct: 322 NILETNGCFKMDYMSSKCKRVLDLVDNILNTSDDKIILV-SQWVEYLKIFENFFKQKNIA 380 Query: 92 RTLDKDPCTIQE-------WNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLE 142 + +++ +N+ +L G GLNL GGN +V W+ + Sbjct: 381 TLMYTGQLKVEDRILAETTFNDATNTHRILLLSIKCGGVGLNL-IGGNHIVMLEPHWNPQ 439 Query: 143 EHQQMIERIGVTRQRQAGFKRAVFVYYL--IAQNTIDELVLQRLRTKSTIQDLLLN 196 Q +RI + G + VY + + N+I++ + QR K + + Sbjct: 440 IELQAQDRIS-----RMGQTKNTHVYKMLNVEDNSIEKYIKQRQDKKIAFVNTVFE 490 >gi|302775146|ref|XP_002970990.1| hypothetical protein SELMODRAFT_171818 [Selaginella moellendorffii] gi|300160972|gb|EFJ27588.1| hypothetical protein SELMODRAFT_171818 [Selaginella moellendorffii] Length = 692 Score = 71.1 bits (173), Expect = 9e-11, Method: Composition-based stats. Identities = 31/164 (18%), Positives = 66/164 (40%), Gaps = 20/164 (12%) Query: 55 KIKALEVIIEKANAA--PIIVAYHFNSDLARLQKAFPQGRT----LDKDPCTI------- 101 K+ A++ + +V H ++ + + + + +D D + Sbjct: 471 KVPAVQDYLSTMLETNCKFLVFAHHHTMVNGIDEHLKKKNVEFIRIDGDTSPVIRQSMVD 530 Query: 102 QEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGF 161 + N K+ + G GL L + ++F + W + Q +R + G Sbjct: 531 KFQNNEKVRAAVLSIRAAGLGLTLT-SASTVIFAEMTWTPGDLIQAEDR-----AHRIGQ 584 Query: 162 KRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIHV 205 + +V +YYL A +TID+ + + + K +LN ++ET+ V Sbjct: 585 RSSVNIYYLHAPDTIDDFIWETIHRKLGNLGQVLNG-REETMRV 627 >gi|296808231|ref|XP_002844454.1| conserved hypothetical protein [Arthroderma otae CBS 113480] gi|238843937|gb|EEQ33599.1| conserved hypothetical protein [Arthroderma otae CBS 113480] Length = 1172 Score = 71.1 bits (173), Expect = 9e-11, Method: Composition-based stats. Identities = 33/174 (18%), Positives = 64/174 (36%), Gaps = 28/174 (16%) Query: 47 HWKEVHDEKI-KALEVIIEKANAAPIIVAY-------HFNSDLARL-QKAFPQGRTLD-- 95 K+ LE ++E ++ II+ Y L L TL Sbjct: 867 RVIGTVSAKLTYLLEKVLEFQDSEKIIIFYESENTAFWIAEGLELLGTDFRIYASTLKPS 926 Query: 96 KDPCTIQEWNEGK-IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 + + +NEG+ + +L HGL++ + + + WD Q I+R Sbjct: 927 QKSEYLSVFNEGESVRVLLMDLRQAAHGLHI-AAASRVYIVNPIWDPNIESQAIKR---- 981 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLR----------TKSTIQDLLLNAL 198 + R V+V L+ + T++E +L+R + K + D ++ + Sbjct: 982 -AHRISQSRPVYVETLVLKGTLEEKMLKRRKQMSSTEMQHAEKDMLDDNTMSYI 1034 >gi|168009588|ref|XP_001757487.1| predicted protein [Physcomitrella patens subsp. patens] gi|162691181|gb|EDQ77544.1| predicted protein [Physcomitrella patens subsp. patens] Length = 952 Score = 71.1 bits (173), Expect = 9e-11, Method: Composition-based stats. Identities = 35/184 (19%), Positives = 70/184 (38%), Gaps = 29/184 (15%) Query: 36 ANGA--VYYDE--EKHWKEVHDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAFP 89 ANG D + K+K + +++ A +++ + LA ++ Sbjct: 732 ANGCKRTQKDPRLKGDVDVKAGVKLKWVLDLVQLCDAAKEKVLIFSEYLYSLALIENMTM 791 Query: 90 QGRTLDKDPCTIQ---------------EWN-EGKIPLLFAHPASCGHGLNLQYGGNILV 133 Q + ++ ++N + + +L A +CG G++L G + +V Sbjct: 792 QRMNWSRGSQILRLDGSLPPQEREMVQHKFNTDPEAKMLCASIKACGEGISL-VGASRVV 850 Query: 134 FFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQR-LRTKSTIQD 192 + W+ +Q I R + G +R V VY LIA +T + + K + Sbjct: 851 LLEVHWNPSVPRQAISR-----AFRIGQQRKVVVYRLIAADTYEATNMHAVATRKEWLSR 905 Query: 193 LLLN 196 LL + Sbjct: 906 LLFD 909 >gi|218531254|ref|YP_002422070.1| non-specific serine/threonine protein kinase [Methylobacterium chloromethanicum CM4] gi|218523557|gb|ACK84142.1| Non-specific serine/threonine protein kinase [Methylobacterium chloromethanicum CM4] Length = 1033 Score = 71.1 bits (173), Expect = 9e-11, Method: Composition-based stats. Identities = 25/131 (19%), Positives = 48/131 (36%), Gaps = 21/131 (16%) Query: 53 DEKIKALEVIIEKANAAPIIVA-YHFNS---DLARLQKAFPQGRTLD------KDPCTIQ 102 + L VI E+ A + V +LAR + P+ ++ + + Sbjct: 820 SAVFEILGVIAERRERALVFVEHRRMQHRLVELARARFNLPRVDLINGDTPISRRQAIVN 879 Query: 103 EWN-----EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 + E +L P + G GL L + ++ S WW+ +Q +R+ Sbjct: 880 RFQRHLEGEPAFDVLVLGPKAAGTGLTLTAATH-VIHLSRWWNPAVEEQCNDRV-----H 933 Query: 158 QAGFKRAVFVY 168 + G R V ++ Sbjct: 934 RLGQTRPVTIH 944 >gi|56475577|ref|YP_157166.1| helicase/SNF2 domain-containing protein [Aromatoleum aromaticum EbN1] gi|56311620|emb|CAI06265.1| helicase/SNF2 family domain protein [Aromatoleum aromaticum EbN1] Length = 883 Score = 71.1 bits (173), Expect = 9e-11, Method: Composition-based stats. Identities = 40/204 (19%), Positives = 78/204 (38%), Gaps = 38/204 (18%) Query: 14 DLQGENIEAFNSASKTVKCLQLANGAVYYDE---EKHWKEVHDEKIKALEVIIE-KANAA 69 +L+ E + + + K L + N A + + H +V + +I+ + IIE + Sbjct: 404 ELEHALWEW-SRSDRQGKILLMENEAEHLSDLIAAAHAVKV-ETRIQRVIEIIETRFPGR 461 Query: 70 PIIVAYHFNSDLARLQKA-----------------------FPQGRTLDK---DPCTIQE 103 +++ + A L A F GRTL K Sbjct: 462 SVLLFTEYKRTQALLMSALIAHFGDDCVGFINGDNRLDGVVFADGRTLSKSALREDVCDA 521 Query: 104 WNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKR 163 +N G+I + G G++LQ + L+ L W+ Q + R+ + G + Sbjct: 522 FNAGEIR-FLISTEAGGEGIDLQEHCSALIHVDLPWNPMRLHQRVGRLN-----RYGQTQ 575 Query: 164 AVFVYYLIAQNTIDELVLQRLRTK 187 +V V L +T++ ++ ++L K Sbjct: 576 SVEVVSLRNPHTVESMIWEKLEEK 599 >gi|299537022|ref|ZP_07050327.1| ATP-dependent helicase yqhH [Lysinibacillus fusiformis ZC1] gi|298727602|gb|EFI68172.1| ATP-dependent helicase yqhH [Lysinibacillus fusiformis ZC1] Length = 502 Score = 71.1 bits (173), Expect = 9e-11, Method: Composition-based stats. Identities = 31/152 (20%), Positives = 69/152 (45%), Gaps = 17/152 (11%) Query: 53 DEKIKALEVIIEKANAAPIIVAYHFNSDLARLQ---------KAFPQGRTLDKDPCTIQE 103 + K + I+++AN +I+ + + LQ G+ ++ Sbjct: 345 NSKAEKTLEIVKQANDK-VIIFTEYRATQIYLQWYLHSNGISSVLFNGKFNKSKRDYMKH 403 Query: 104 WNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKR 163 + + +L A + G G+NLQ+ + ++ + L W+ + +Q I R+ + G + Sbjct: 404 LFKERAQVLIA-TEAGGEGINLQF-CHHVINYDLPWNPMKLEQRIGRV-----HRLGQEH 456 Query: 164 AVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 V +Y L ++TI+E +L+ L TK + + ++ Sbjct: 457 DVHIYNLAIEHTIEEKILELLHTKIDVFEKVV 488 >gi|298488366|ref|ZP_07006398.1| DNA helicase [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] gi|298157188|gb|EFH98276.1| DNA helicase [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] Length = 650 Score = 71.1 bits (173), Expect = 9e-11, Method: Composition-based stats. Identities = 28/154 (18%), Positives = 58/154 (37%), Gaps = 18/154 (11%) Query: 55 KIKALEVIIEKAN-AAPIIVAYHFNSDLARLQKA----------FPQGRTLDKDPCTIQE 103 K++ + ++ + + +I+ + +A L++ + K I Sbjct: 488 KVRIVADLMAELDVDDKVILFCEYQESVASLREHCLARGVGCVTLVGSDSPKKRQKAIDA 547 Query: 104 WNEG-KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFK 162 + + + ++ G G NL N + F L W Q +R + G Sbjct: 548 FQQDQDCRVFIGTRSAAGTGYNLT-AANYVFFLGLPWTPGLQDQAEDR-----AYRNGQL 601 Query: 163 RAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 R V V +A++TID+ + Q L K + L++ Sbjct: 602 RLVVVKIPLAEDTIDQQLWQMLMDKRALASDLID 635 >gi|258511218|ref|YP_003184652.1| helicase domain-containing protein [Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446] gi|257477944|gb|ACV58263.1| helicase domain protein [Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446] Length = 1170 Score = 71.1 bits (173), Expect = 9e-11, Method: Composition-based stats. Identities = 45/219 (20%), Positives = 81/219 (36%), Gaps = 26/219 (11%) Query: 3 QYHKFQRELYCDLQGENIEAF--NSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 +Y + + E+ A + LA+ V +++ W ++ E Sbjct: 436 EYEELEDEIASQATAAQTIAELEQEIRTLERLEALAHQLVLSNQDSKWTQLSTLLHDEPE 495 Query: 61 VIIEKANAAPIIVAYHFNSDLARLQKAFPQ------------GRTLDKDPCTIQE--WNE 106 + + N +I+ L LQ+ G T + IQE W++ Sbjct: 496 MRDKSGNRRKLIIFTEHRDTLNYLQRKMEGFLGRPDAIVAIHGGTKRDERRKIQEKFWHD 555 Query: 107 GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVF 166 +L A + G G+NLQ N+L+ + L W+ +Q RI + G + Sbjct: 556 PDTLILLA-TDAAGEGVNLQN-ANLLINYDLPWNPNRLEQRFGRI-----HRIGQTEVCY 608 Query: 167 VYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIHV 205 ++ L+A T + V QRL K ++ ALK + Sbjct: 609 MWNLVAAKTREGEVFQRLFEKLKVER---EALKGRVFDI 644 >gi|269860391|ref|XP_002649917.1| SWF/SNF family helicase [Enterocytozoon bieneusi H348] gi|220066677|gb|EED44151.1| SWF/SNF family helicase [Enterocytozoon bieneusi H348] Length = 568 Score = 71.1 bits (173), Expect = 9e-11, Method: Composition-based stats. Identities = 39/171 (22%), Positives = 66/171 (38%), Gaps = 19/171 (11%) Query: 37 NGAVYYDEEKHWKEVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQKA------- 87 V D K +K + K +++ I+K N +V H + + L+ Sbjct: 379 GNTVEDDVIKAYKLAAEIKQESVINYIKKMITNNDKFLVFAHHQTMINELENCCQNCNIY 438 Query: 88 --FPQGRT-LDKDPCTIQEWNEG-KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEE 143 GRT K ++ + + + + GL L + +VF L+W+ Sbjct: 439 YIRIDGRTGKQKRYELVELFQTNTEYQVAILSLTAASTGLTLTAAKS-VVFAELYWNPGT 497 Query: 144 HQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 Q +RI + G V +YYLI + TIDE+V L K I + + Sbjct: 498 LMQAEDRI-----HRIGQTTPVDIYYLICKKTIDEIVWPYLLKKLNILEKI 543 >gi|169611232|ref|XP_001799034.1| hypothetical protein SNOG_08724 [Phaeosphaeria nodorum SN15] gi|111062772|gb|EAT83892.1| hypothetical protein SNOG_08724 [Phaeosphaeria nodorum SN15] Length = 1369 Score = 70.7 bits (172), Expect = 1e-10, Method: Composition-based stats. Identities = 21/91 (23%), Positives = 36/91 (39%), Gaps = 6/91 (6%) Query: 106 EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 K +L A G GLNL + ++ WW+ QQ R + G K Sbjct: 1230 NDKCNILLASLRCGGLGLNLTM-ASRVIMVDPWWNEASEQQA-----FCRVFRIGQKEET 1283 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 F+ L +NT+D +++ K+ ++ Sbjct: 1284 FMSRLCVKNTVDSKLIEMQERKTKEIGEIME 1314 >gi|82914730|ref|XP_728823.1| hypothetical protein [Plasmodium yoelii yoelii str. 17XNL] gi|23485366|gb|EAA20388.1| Arabidopsis thaliana BRAHMA ortholog-related [Plasmodium yoelii yoelii] Length = 1529 Score = 70.7 bits (172), Expect = 1e-10, Method: Composition-based stats. Identities = 27/129 (20%), Positives = 52/129 (40%), Gaps = 16/129 (12%) Query: 79 SDLARLQKAFPQGRTLDKDPCTIQEWNE----------GKIPLLFAHPASCGHGLNLQYG 128 SD + +F Q + + + Q N+ + S GLNLQ Sbjct: 1004 SDRRDIIDSFNQNKFVKNSDNSSQNKNDSLLLDPASKLDDTMIFILSTRSGSLGLNLQ-A 1062 Query: 129 GNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKS 188 + ++ F ++ + Q + R + G K V V+ I ++++EL+ Q+ + K Sbjct: 1063 ADTVIIFDSDFNPHQDIQAMCRC-----HRIGQKNVVKVFRFITLSSVEELIFQKAKDKL 1117 Query: 189 TIQDLLLNA 197 I D ++ A Sbjct: 1118 NINDKVIQA 1126 >gi|281207984|gb|EFA82162.1| SNF2-related domain-containing protein [Polysphondylium pallidum PN500] Length = 498 Score = 70.7 bits (172), Expect = 1e-10, Method: Composition-based stats. Identities = 29/156 (18%), Positives = 60/156 (38%), Gaps = 19/156 (12%) Query: 55 KIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTLD-----------KDPCTI 101 K+ A+ IE + + ++ H + + +++ + + + Sbjct: 106 KMAAISKFIEDKLEDNSKFLIFAHHKTVMDGIEQLVKKKKVEYIKIDGTTPAHARSNLVN 165 Query: 102 QEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGF 161 + KI + + G GL L ++ +F L+W Q R+ + G Sbjct: 166 IFQTDEKIKVAILSITAAGTGLTLT-AASVAIFAELYWTPGVLMQAEARV-----HRFGQ 219 Query: 162 KRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 R+V + YL+ NTIDE + L +K + +L+ Sbjct: 220 NRSVLIQYLVGINTIDESIWSMLESKKDVLGRILDG 255 >gi|195588190|ref|XP_002083841.1| GD13945 [Drosophila simulans] gi|194195850|gb|EDX09426.1| GD13945 [Drosophila simulans] Length = 1270 Score = 70.7 bits (172), Expect = 1e-10, Method: Composition-based stats. Identities = 34/174 (19%), Positives = 68/174 (39%), Gaps = 24/174 (13%) Query: 45 EKHWKEVHDEKIKALEVIIEKANAA----PIIVAYHFNSDLARLQKAFPQGRTLDKDPCT 100 K KI ++ ++ K IIV + + L + +A ++ CT Sbjct: 1096 HKSIIGDFSTKIASIVELVLKIKGENEQEKIIVFSQWQAILIEIARALSLNGIQFRNKCT 1155 Query: 101 IQEWNEGKIPL-----LFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTR 155 +++++ K P L + GLNL + + + + +Q I RI Sbjct: 1156 NKDFDDFKNPYSNVTCLLMPLSKGSKGLNLIEATH-VFLVEPILNPGDERQAIGRI---- 1210 Query: 156 QRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKS---------TIQDLLLNALKK 200 + G KR V+ I T++E +L + + ++++ L++LKK Sbjct: 1211 -HRFGQKRPTKVHRFIVNGTVEENILSLITSADDTTTLGTHWDLENMTLDSLKK 1263 >gi|9629985|ref|NP_046203.1| global transactivator [Orgyia pseudotsugata MNPV] gi|2493353|sp|O10302|GTA_NPVOP RecName: Full=Probable global transactivator; AltName: Full=ATP-dependent helicase GTA gi|7514943|pir||T10316 global transactivator - Orgyia pseudotsugata nuclear polyhedrosis virus gi|1911293|gb|AAC59046.1| global transactivator [Orgyia pseudotsugata MNPV] Length = 498 Score = 70.7 bits (172), Expect = 1e-10, Method: Composition-based stats. Identities = 35/226 (15%), Positives = 78/226 (34%), Gaps = 37/226 (16%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSAS------KTVKCLQLANG------AVYYDEEKHWK 49 + Y++ + A + + Q+ A + E H Sbjct: 264 RVYNELKSASQRAYDDAVASADKAGGMQDVLWLLCRLRQVCCHPALTKCAAMFPEHAHIF 323 Query: 50 EVH--DEKIKALEVIIEKANAAP---IIVAYHFNSDLARLQKAFPQ---------GRTLD 95 E K + ++++ P +++ + L + + G+ Sbjct: 324 EPAYESSKCRRALELVQRVLDTPDDKVVLVSQWVEFLQLVAGLLRRRGVPILLYTGQLRV 383 Query: 96 KDPCTIQ-EWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIG 152 ++ ++ ++N P +L G GLNL G N ++ W+ + Q +RI Sbjct: 384 EERTAVENQFNAADSPYRVLLMSIKCGGVGLNLTGG-NHIIMLEPHWNPQIELQAQDRI- 441 Query: 153 VTRQRQAGFKRAVFVYYLIA--QNTIDELVLQRLRTKSTIQDLLLN 196 + G K+ +VY +I +N+I+ + R K T + + + Sbjct: 442 ----HRMGQKKRTYVYKMIVDEENSIERYMKARQDKKLTFVNKVFD 483 >gi|134287906|ref|YP_001110070.1| helicase domain-containing protein [Burkholderia vietnamiensis G4] gi|134132556|gb|ABO60182.1| helicase domain protein [Burkholderia vietnamiensis G4] Length = 682 Score = 70.7 bits (172), Expect = 1e-10, Method: Composition-based stats. Identities = 33/168 (19%), Positives = 66/168 (39%), Gaps = 19/168 (11%) Query: 49 KEVHDEKIKALEVIIEKANAA-PIIVAYHFNSDLARLQKAFPQGRT-----------LDK 96 +E+ K++ + +I+ N +++ F ++A ++A + + Sbjct: 508 RELESYKVRPIVEMIKDLNGDDKVLLFCEFKENVALFKQALDEVGIGYSVLTGDMSSPTR 567 Query: 97 DPCTIQEWNEGKIP-LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTR 155 I E+ + + A+ G G NL N + SL W Q +R Sbjct: 568 RQRAIDEFQSDPLKRVFITTTAAGGVGHNLT-AANYVFLVSLPWTPGLAAQAEDR----- 621 Query: 156 QRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETI 203 + G R V V + +NTID +++ R K +I +L+ + E + Sbjct: 622 AFRNGQLRLVIVLIPLVENTIDMDLVEMHRNKQSIAAEILDPEEAERL 669 >gi|331028076|ref|YP_004421790.1| helicase [Roseobacter phage RDJL Phi 1] gi|301341539|gb|ADK73423.1| helicase [Roseobacter phage RDJL Phi 1] Length = 512 Score = 70.7 bits (172), Expect = 1e-10, Method: Composition-based stats. Identities = 41/209 (19%), Positives = 74/209 (35%), Gaps = 25/209 (11%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYD-EEKHWKEVHDEKIKALE 60 Y ++ + I VK Q+ +G + + ++H + ++ AL Sbjct: 299 AVYRDLIASTILEVGDQEISLGEYPPGLVKFQQIVSGYLVDEFGDEHTIPGGNPRLDALV 358 Query: 61 VIIEKANAAPIIVAYHFNSDLARLQKAFP----QGRTLDKDPCTIQ------EWN----E 106 +E+ N ++ F D+ ++ A + T + E+ + Sbjct: 359 DEVERTNGRTVVWCA-FRRDMDQVVAALKATGRKVLTYHGRSTDAEKALARKEFAPDKLD 417 Query: 107 GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVF 166 K L HP S G GLNL G + ++++S D Q ER G V Sbjct: 418 SKYDDLVGHPKSGGRGLNL-SGADKIIWYSHTTDAVVRFQADERATEV----GGQNVPVV 472 Query: 167 VYYLIAQNTIDELVL-QRLRTKSTIQDLL 194 IA +DE +L L K+ + + Sbjct: 473 --NFIAPG-VDEYILDDILAPKAETAEDV 498 >gi|311269513|ref|XP_003132519.1| PREDICTED: helicase-like transcription factor-like [Sus scrofa] Length = 125 Score = 70.7 bits (172), Expect = 1e-10, Method: Composition-based stats. Identities = 20/100 (20%), Positives = 40/100 (40%), Gaps = 9/100 (9%) Query: 95 DKDPCTIQEWNE---GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERI 151 K +IQ + G ++ + G GLNL + + W+ Q +R Sbjct: 4 KKRVESIQCFQNTEAGSPTIMLLSLKAGGVGLNL-SAASRVFLMDPAWNPAAEDQCFDRC 62 Query: 152 GVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQ 191 + G K+ V + I +++++E +L+ TK + Sbjct: 63 -----HRLGQKQEVIITKFIVKDSVEENMLKIQNTKRELA 97 >gi|317128397|ref|YP_004094679.1| helicase [Bacillus cellulosilyticus DSM 2522] gi|315473345|gb|ADU29948.1| helicase domain protein [Bacillus cellulosilyticus DSM 2522] Length = 542 Score = 70.7 bits (172), Expect = 1e-10, Method: Composition-based stats. Identities = 25/152 (16%), Positives = 65/152 (42%), Gaps = 15/152 (9%) Query: 52 HDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQ--------KAFPQGRTLDKDPCTIQE 103 + K + + +I++++ +I+ + + LQ K+ P + + Sbjct: 353 TNSKAEQVLKLIQQSDDK-VIIFTEYRATQLYLQWFLAQNGIKSVPFRGGFKRSKKDWMK 411 Query: 104 WNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKR 163 + + G G+NLQ+ + ++ + L W+ +Q I RI + G ++ Sbjct: 412 QLFKDQAQVLIATEAGGEGINLQF-CHRMINYDLPWNPMRIEQRIGRI-----HRLGQEK 465 Query: 164 AVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 V +Y ++T+++ +L+ L K + + ++ Sbjct: 466 DVEIYNFAVKDTVEDHILKLLYKKIGLFEGVI 497 >gi|157873415|ref|XP_001685219.1| helicase [Leishmania major strain Friedlin] gi|68128290|emb|CAJ08421.1| helicase-like protein [Leishmania major strain Friedlin] Length = 949 Score = 70.7 bits (172), Expect = 1e-10, Method: Composition-based stats. Identities = 20/90 (22%), Positives = 39/90 (43%), Gaps = 7/90 (7%) Query: 109 IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVY 168 + L + G GLNL G + ++ ++ Q ++R + G + V VY Sbjct: 783 VFLFLISTRAGGTGLNLT-GADTVILLDSDFNPHNDLQAVDRC-----HRIGQRNPVAVY 836 Query: 169 YLIAQNTI-DELVLQRLRTKSTIQDLLLNA 197 L++ +T+ DE + K ++ L+L Sbjct: 837 RLVSPHTVEDEWHSGIVDRKLKLEHLVLGG 866 >gi|125583090|gb|EAZ24021.1| hypothetical protein OsJ_07744 [Oryza sativa Japonica Group] Length = 1360 Score = 70.7 bits (172), Expect = 1e-10, Method: Composition-based stats. Identities = 24/152 (15%), Positives = 56/152 (36%), Gaps = 24/152 (15%) Query: 62 IIEKANAAPIIVAYHFNSDLARLQK------AFPQGRTL---------DKDPCTIQEWNE 106 + E ++V + L+ + + +G + ++ +N+ Sbjct: 1175 LCEAMKER-VLVFSQYLEPLSLIMDQLSKMFNWIEGEEILLMSGNVLVQNREALMEAFND 1233 Query: 107 --GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA 164 ++ A +C G+ L G + +V + W+ + R + R + G ++ Sbjct: 1234 MKSNAKVMLASTKACCEGITL-IGASRVVLLDVVWNPS-----VGRQAIGRAYRIGQEKI 1287 Query: 165 VFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 V+ Y LI + T ++ R K + LL + Sbjct: 1288 VYTYNLITEGTKEKDKYDRQAKKDHMSKLLFS 1319 >gi|296448804|ref|ZP_06890651.1| helicase domain protein [Methylosinus trichosporium OB3b] gi|296253690|gb|EFH00870.1| helicase domain protein [Methylosinus trichosporium OB3b] Length = 949 Score = 70.7 bits (172), Expect = 1e-10, Method: Composition-based stats. Identities = 32/180 (17%), Positives = 66/180 (36%), Gaps = 18/180 (10%) Query: 29 TVKCLQLAN-GAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKA 87 + C+++ D +E K L ++++ +IV + L +++ Sbjct: 516 LLACMRMVCDTPAILDPTCRISPKLEELEKILADLLDEPERK-VIVFSEWERMLTMVREL 574 Query: 88 FPQGRT----------LDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSL 137 + ++ I + LF S GLNLQ + +V L Sbjct: 575 AGEMGVEAAWHTGSLPQERRRAEINRFKRDPACRLFFSTDSGSVGLNLQV-ASAVVNVDL 633 Query: 138 WWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 W+ + +Q I R + R+V V L+ + +I+ +L + K + D +L+ Sbjct: 634 PWNPAKLEQRIARAW-----RKNQPRSVSVVNLVTEGSIEHSILHLIGQKQALADGVLDG 688 >gi|254283195|ref|ZP_04958163.1| Type III restriction enzyme, res subunit family [gamma proteobacterium NOR51-B] gi|219679398|gb|EED35747.1| Type III restriction enzyme, res subunit family [gamma proteobacterium NOR51-B] Length = 1184 Score = 70.7 bits (172), Expect = 1e-10, Method: Composition-based stats. Identities = 48/211 (22%), Positives = 76/211 (36%), Gaps = 28/211 (13%) Query: 8 QRELYCDLQGENIEAFN------SASKTVKCLQ-LANGAVYYDEEKHWKEVHDEKIKALE 60 + ELY D + A + +K L+ A G V +K W+E+ E Sbjct: 448 EYELYADQVVDQATAAETIPELEAEILILKDLEHQALGVVQSGNDKKWEELSHLLQDRPE 507 Query: 61 VIIEKANAAPIIVAYHFNSDLARLQKAFPQ-------------GRTLDKDPCTIQEW-NE 106 + E + +I+ L L G D +E+ N Sbjct: 508 MYTESGSRRKLIIFTEHKDTLNYLVGRIRGMLGNPEAVITIHGGVNRDDRRKAQEEFRNN 567 Query: 107 GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVF 166 + +L A + G G+NLQ N++V + L W+ +Q RI + G Sbjct: 568 RDVQVLVA-TDAAGEGVNLQN-ANLMVNYDLPWNPNRLEQRFGRI-----HRIGQTEVCH 620 Query: 167 VYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 ++ LIA T + V QRL K I+ L Sbjct: 621 LWNLIASETREGEVFQRLFDKIEIEKQALGG 651 >gi|327268904|ref|XP_003219235.1| PREDICTED: transcription termination factor 2-like [Anolis carolinensis] Length = 1233 Score = 70.7 bits (172), Expect = 1e-10, Method: Composition-based stats. Identities = 28/159 (17%), Positives = 57/159 (35%), Gaps = 20/159 (12%) Query: 53 DEKIKALEVIIEKANA--APIIVAYHFNSDLA---------RLQKAFPQGRTLDKDPCTI 101 K+ L ++ ++ + S L L+ A G K + Sbjct: 1062 STKLSHLLNELKAIQGHSQKSVIVSQWTSMLKVVAVHLKKLGLKYATVDGSVNPKQRMDV 1121 Query: 102 --QEWNEGKIP-LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQ 158 + N K P ++ + G GLNL G + L + W+ Q +RI + Sbjct: 1122 VEEFNNNPKGPEVMLISLLAGGVGLNLVGGNH-LFLLDMHWNPALEDQACDRI-----YR 1175 Query: 159 AGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 G + V ++ + + T++E + + K + +L+ Sbjct: 1176 VGQRNDVTIHRFVCKRTVEEKISELQTKKKELAQKVLSG 1214 >gi|240274844|gb|EER38359.1| DNA repair helicase RAD5,16 [Ajellomyces capsulatus H143] Length = 1112 Score = 70.7 bits (172), Expect = 1e-10, Method: Composition-based stats. Identities = 32/162 (19%), Positives = 59/162 (36%), Gaps = 21/162 (12%) Query: 49 KEVHDEKIKA----LEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGR----------TL 94 + K+ A L + + +++ F L + R + Sbjct: 775 HLMPGAKLTAISSCLVNWFKNSVETKVVIFTQFLGMAHVLGSMCQENRWGHLSLTGKMPI 834 Query: 95 DKDPCTIQEW-NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGV 153 + +I+E+ + I +L + G GL+L N V LWW+ QQ R+ Sbjct: 835 RQREKSIEEFSKDPAIRILVCSLRTAGTGLDLT-AANKCVLVDLWWNEAIEQQAFFRLF- 892 Query: 154 TRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 + KR V ++ +N+ID+ + KS D +L Sbjct: 893 ----RINQKRKVEFVRVVVRNSIDDRLQLIQEDKSNNIDRVL 930 >gi|170592285|ref|XP_001900899.1| Helicase conserved C-terminal domain containing protein [Brugia malayi] gi|158591594|gb|EDP30199.1| Helicase conserved C-terminal domain containing protein [Brugia malayi] Length = 741 Score = 70.7 bits (172), Expect = 1e-10, Method: Composition-based stats. Identities = 27/138 (19%), Positives = 53/138 (38%), Gaps = 17/138 (12%) Query: 64 EKANAAPIIVAYHFNSDLARL-----QKAFPQGRT------LDKDPCTIQEWNEGKIPLL 112 + A +++ H L + +K R +D + + Sbjct: 567 DGAPKKKVLIFAHHQVVLDMISIDVAKKGLRSIRIDGTTASRLRDEQCRLFQENDDVMVA 626 Query: 113 FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIA 172 + G G+ L +++VF L W+ +Q +R + G K +VFV YLIA Sbjct: 627 VLSITAAGIGVTLT-AASVVVFAELHWNPGTLKQAEDR-----AHRLGQKDSVFVQYLIA 680 Query: 173 QNTIDELVLQRLRTKSTI 190 + T D+++ ++ K + Sbjct: 681 KGTADDILWPLIQKKLDV 698 >gi|326437103|gb|EGD82673.1| hypothetical protein PTSG_03334 [Salpingoeca sp. ATCC 50818] Length = 884 Score = 70.7 bits (172), Expect = 1e-10, Method: Composition-based stats. Identities = 32/173 (18%), Positives = 64/173 (36%), Gaps = 30/173 (17%) Query: 29 TVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAF 88 T+K Q A ++ LE + A +++ H + L +A Sbjct: 520 TLKLFQATGQA----------KLAACVTYVLEQL---AKGVKMLLFAHHQPVMDGLMQAL 566 Query: 89 PQGRTLD-----------KDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSL 137 + ++ + + + + G GL L + ++VF L Sbjct: 567 CEKSIRHVRIDGSTPSSLRNELATRFQTDETCRVALLSITAAGTGLTL-HAATLVVFAEL 625 Query: 138 WWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 +W+ + Q +R + G + AV V YLI +NT+DE + +++ K + Sbjct: 626 FWNPGQLLQAEDR-----AHRVGQQCAVDVKYLICRNTLDESMWEKVERKMAV 673 >gi|158296666|ref|XP_317019.4| AGAP008426-PA [Anopheles gambiae str. PEST] gi|157014820|gb|EAA12838.4| AGAP008426-PA [Anopheles gambiae str. PEST] Length = 722 Score = 70.7 bits (172), Expect = 1e-10, Method: Composition-based stats. Identities = 27/143 (18%), Positives = 55/143 (38%), Gaps = 19/143 (13%) Query: 59 LEVIIEKANAAPIIVAYHFNSDLARLQKAFPQ---------GRTL-DKDPCTIQEWNE-G 107 L+ ++++ IV H + L ++K+ + G T D ++ + Sbjct: 496 LKEVVKEN--KKFIVFAHHHVMLDAIEKSLSKQNVDFIRIDGSTRSDLRGALVERFQSKA 553 Query: 108 KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFV 167 +C G+ L ++++F L W+ Q +R + G V V Sbjct: 554 TCRAAVLSLKACNAGITLT-AAHLVLFAELDWNPSTLAQA-----ESRAHRIGQADNVTV 607 Query: 168 YYLIAQNTIDELVLQRLRTKSTI 190 YL+A+ T D+++ L+ K Sbjct: 608 RYLLAKKTADDIIWTMLQRKQET 630 >gi|242222574|ref|XP_002477001.1| predicted protein [Postia placenta Mad-698-R] gi|220723673|gb|EED77797.1| predicted protein [Postia placenta Mad-698-R] Length = 430 Score = 70.7 bits (172), Expect = 1e-10, Method: Composition-based stats. Identities = 18/107 (16%), Positives = 45/107 (42%), Gaps = 8/107 (7%) Query: 100 TIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 I E+N+ + + G G+N+ +I+V + + Q ++R Sbjct: 2 AIDEYNKPDSDKFIFLLTTRAGGLGINVTT-ADIVVLYDSDLNSRADLQAMDR-----AH 55 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIH 204 + G + V+V+ I + +++E +L+R + L++ + + Sbjct: 56 RIGQTKQVYVFRFITEGSVEERMLERTAQALRLDQLVMQQGRMQHTK 102 >gi|159482707|ref|XP_001699409.1| hypothetical protein CHLREDRAFT_152316 [Chlamydomonas reinhardtii] gi|158272860|gb|EDO98655.1| predicted protein [Chlamydomonas reinhardtii] Length = 1513 Score = 70.7 bits (172), Expect = 1e-10, Method: Composition-based stats. Identities = 27/145 (18%), Positives = 50/145 (34%), Gaps = 21/145 (14%) Query: 53 DEKIKALEV----IIEKANAAPIIVAYHFNSDLA----RLQKAFPQGRTL-------DKD 97 + K++AL + E A +V F+ L RLQ RT+ + Sbjct: 1315 ESKLRALMAELRAMREADPTAKALVFTQFSQALEWLRSRLQAEGFGHRTITGDMPPKRRT 1374 Query: 98 PCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 N+ + + G+NL N + + Q I R Sbjct: 1375 EAITSFQNDPNTCVFLLSVRAGAVGINLT-AANHVFLLEPCMNPATEHQAIGRAW----- 1428 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQ 182 + G R V V L + +++E++++ Sbjct: 1429 RMGQSRPVTVKRLFVKGSVEEVIMK 1453 >gi|312074223|ref|XP_003139874.1| hypothetical protein LOAG_04289 [Loa loa] gi|307764965|gb|EFO24199.1| hypothetical protein LOAG_04289 [Loa loa] Length = 879 Score = 70.7 bits (172), Expect = 1e-10, Method: Composition-based stats. Identities = 23/126 (18%), Positives = 45/126 (35%), Gaps = 17/126 (13%) Query: 66 ANAAPIIVAYHFNSDLARLQKAFPQ----GRTLDKDPCTIQEW-------NEGKIPLLFA 114 A +++ + L Q R LD + + +I Sbjct: 336 AKGHRVLIFSQMSRVLDIAQDYLIYKGYNYRRLDGSVRAEERFVAVNRFQTNSEIFCFLL 395 Query: 115 HPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQN 174 + G GLNL G+ ++F ++ + Q R + G + V V LIA+ Sbjct: 396 STRAGGLGLNLT-AGDTVIFLDSDFNPQNDIQAAARC-----HRIGQMKPVKVIRLIARY 449 Query: 175 TIDELV 180 T+++++ Sbjct: 450 TVEDMI 455 >gi|218191274|gb|EEC73701.1| hypothetical protein OsI_08293 [Oryza sativa Indica Group] Length = 1363 Score = 70.7 bits (172), Expect = 1e-10, Method: Composition-based stats. Identities = 23/152 (15%), Positives = 53/152 (34%), Gaps = 24/152 (15%) Query: 62 IIEKANAAPIIVAYHFNSDLARLQKAFPQG---------------RTLDKDPCTIQEWNE 106 + E ++V + L+ + + + ++ +N Sbjct: 1178 LCEAMKER-VLVFSQYLEPLSLIMDQLSKMFNWTEGEEILLMSGNVLVQNREALMEAFNN 1236 Query: 107 --GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA 164 ++ A +C G+ L G + +V + W+ + R + R + G ++ Sbjct: 1237 MKSNAKVMLASTKACCEGITL-IGASRVVLLDVVWNPS-----VGRQAIGRAYRIGQEKI 1290 Query: 165 VFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 V+ Y LI + T ++ R K + LL + Sbjct: 1291 VYTYNLITEGTKEKDKYDRQAKKDHMSKLLFS 1322 >gi|317121963|ref|YP_004101966.1| helicase [Thermaerobacter marianensis DSM 12885] gi|315591943|gb|ADU51239.1| helicase domain protein [Thermaerobacter marianensis DSM 12885] Length = 524 Score = 70.4 bits (171), Expect = 1e-10, Method: Composition-based stats. Identities = 33/154 (21%), Positives = 63/154 (40%), Gaps = 20/154 (12%) Query: 53 DEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRT----------LDKDPCTIQ 102 + K LE ++++ P++V F + L + + + Sbjct: 318 NHKALMLERLVQRL-GEPVVVFTEFRATQDYLARRLRRAGVETVVYHGAMGTGERDAAKA 376 Query: 103 EWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFK 162 + +G + G GLNLQ+ N +V + L W+ +Q I RI + G + Sbjct: 377 RFRQGAR--VLISTECGGQGLNLQFCRN-VVNYDLPWNPMRVEQRIGRI-----HRLGQE 428 Query: 163 R-AVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 +V V+ L A+ TI+E +L+ L K + ++ Sbjct: 429 AASVRVFNLYARRTIEEYILRLLDEKINLFRQVI 462 >gi|330795379|ref|XP_003285751.1| hypothetical protein DICPUDRAFT_97160 [Dictyostelium purpureum] gi|325084299|gb|EGC37730.1| hypothetical protein DICPUDRAFT_97160 [Dictyostelium purpureum] Length = 1743 Score = 70.4 bits (171), Expect = 1e-10, Method: Composition-based stats. Identities = 27/141 (19%), Positives = 51/141 (36%), Gaps = 15/141 (10%) Query: 70 PIIVAYHFNSDLARLQKAFPQ--------GRTLDKDPCTIQEWN-EGKIPLLFAHPASCG 120 +I+ + L + +A + + + I ++ I +L Sbjct: 1594 KVIIFSQWMDLLEIISRALKENDIEFAKISKKPNSFESAINQFRKNPNINVLLLPIQRGA 1653 Query: 121 HGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELV 180 GLNL ++ + + Q I R+ + G + FV+ I +NTI+E V Sbjct: 1654 SGLNLIEATHVFI-VEPILNPSVEAQAINRV-----HRFGQSKETFVHRFIIKNTIEEKV 1707 Query: 181 LQRLRTKSTIQDLLLNALKKE 201 Q + K D L + K + Sbjct: 1708 AQMNKKKEKELDWKLASNKND 1728 >gi|322493998|emb|CBZ29290.1| helicase-like protein [Leishmania mexicana MHOM/GT/2001/U1103] Length = 991 Score = 70.4 bits (171), Expect = 1e-10, Method: Composition-based stats. Identities = 20/90 (22%), Positives = 40/90 (44%), Gaps = 7/90 (7%) Query: 109 IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVY 168 + L + G GLNL G + ++ ++ Q ++R + G + V VY Sbjct: 825 VFLFLISTRAGGTGLNLT-GADTVILLDGDFNPHNDLQAVDRC-----HRIGQQNPVAVY 878 Query: 169 YLIAQNTI-DELVLQRLRTKSTIQDLLLNA 197 L++ +T+ DE + + K ++ L+L Sbjct: 879 RLVSPHTVEDERHSRIVDGKLKLEHLVLGG 908 >gi|145542730|ref|XP_001457052.1| hypothetical protein [Paramecium tetraurelia strain d4-2] gi|124424866|emb|CAK89655.1| unnamed protein product [Paramecium tetraurelia] Length = 767 Score = 70.4 bits (171), Expect = 1e-10, Method: Composition-based stats. Identities = 29/159 (18%), Positives = 53/159 (33%), Gaps = 19/159 (11%) Query: 54 EKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQKAFPQ-----------GRTLDKDPCT 100 KIKA++ I N + H L +Q+ Q + Sbjct: 423 AKIKAIKDYICTLFENEIKFLFFAHHQDVLDAVQEYCVQNEIQYMRIDGNVGVEQRHLNV 482 Query: 101 IQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 N +I + S +G+ L + +VF + W Q +R + G Sbjct: 483 QMFQNNDEIRIAILSVTSANYGITLT-AASTIVFGEMHWTPAIMLQAEDR-----AHRIG 536 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 + V +YLI T+D+ + ++ K ++ K Sbjct: 537 QVQCVDCHYLIGDGTLDDHIFNKIENKMNTVSNFIDGQK 575 >gi|299117109|emb|CBN73880.1| conserved unknown protein [Ectocarpus siliculosus] Length = 2864 Score = 70.4 bits (171), Expect = 1e-10, Method: Composition-based stats. Identities = 19/107 (17%), Positives = 41/107 (38%), Gaps = 10/107 (9%) Query: 95 DKDPCTIQEWNEGK---IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERI 151 K I +N+ + + + G+NL N +V W+ Q + R Sbjct: 2548 KKRQQLISRFNDPERKSTGVFLLSTKAGNMGINL-VAANRVVLMDTSWNPANDLQAMFRC 2606 Query: 152 GVTRQRQAGFKRAVFVYYLIAQN-TIDELVLQRLRTKSTIQDLLLNA 197 + G K+ V V+ L+ N +++ + + K + +++A Sbjct: 2607 -----YRFGQKKPVQVFRLVMGNKSLEYKIHNKQVAKHALAGRVVDA 2648 >gi|326675456|ref|XP_003200358.1| PREDICTED: e3 ubiquitin-protein ligase SHPRH-like [Danio rerio] Length = 1644 Score = 70.4 bits (171), Expect = 1e-10, Method: Composition-based stats. Identities = 37/190 (19%), Positives = 68/190 (35%), Gaps = 28/190 (14%) Query: 26 ASKTVKCLQLANGA----VYYDEEKH------WKEVHDEKIKALEVIIEKAN----AAPI 71 A K C Q + A V+ + H K H K++A+ +++K A Sbjct: 1433 AIKCAICRQTTSHAEISYVFTTQNNHQGQDIPVKGSHSTKVEAVVRVLKKVQMTDPGAKS 1492 Query: 72 IVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEG--------KIPLLFAHPASCGHGL 123 +V + L + KA I ++ E KI +L + +GL Sbjct: 1493 LVFSTWQGVLDIIAKALFDNNMEFAQINGIHKFQENLSAFKYEEKINILLLPLHTGSNGL 1552 Query: 124 NLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQR 183 N+ ++L + Q I R+ + G + FV+ + ++TI+E + Sbjct: 1553 NIIEATHVL-LVEPILNPAHELQAIGRV-----HRIGQTKPTFVHRFLIKSTIEERMQAM 1606 Query: 184 LRTKSTIQDL 193 L+T Sbjct: 1607 LKTAEKSHSS 1616 >gi|323452688|gb|EGB08561.1| hypothetical protein AURANDRAFT_71563 [Aureococcus anophagefferens] Length = 1637 Score = 70.4 bits (171), Expect = 1e-10, Method: Composition-based stats. Identities = 22/80 (27%), Positives = 32/80 (40%), Gaps = 6/80 (7%) Query: 111 LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYL 170 +L + G GLNL G +L+ W+ Q R+ + G R V L Sbjct: 1374 VLLLSSRAGGAGLNL-PGACVLILLEPDWNPAVDDQTCARVW-----RPGQGRRTRVLRL 1427 Query: 171 IAQNTIDELVLQRLRTKSTI 190 A T++E VL R K + Sbjct: 1428 AAAGTLEETVLARQAEKQAL 1447 >gi|301770701|ref|XP_002920769.1| PREDICTED: zinc finger Ran-binding domain-containing protein 3-like [Ailuropoda melanoleuca] Length = 1087 Score = 70.4 bits (171), Expect = 1e-10, Method: Composition-based stats. Identities = 33/167 (19%), Positives = 65/167 (38%), Gaps = 20/167 (11%) Query: 49 KEVHDEKIKALEVIIE---KANAAPIIVAYHFNSDLARLQKAFPQGRTL----------- 94 K+ K A++ I+ + ++ +V H S L +A + + Sbjct: 331 KQTAIAKAGAVKDYIKMMLQNDSLKFLVFAHHLSMLQACTEAVIENKARYIRIDGSVPSS 390 Query: 95 DKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 ++ Q + + + G GL + +VF L+WD +Q +R Sbjct: 391 ERIHLVNQFQKDPDTRVAILSIQAAGQGLTFTAATH-VVFAELYWDPGHIKQAEDR---- 445 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 + G +V ++YL+A T+D L+ L K+ + LN K++ Sbjct: 446 -AHRIGQCTSVNIHYLVANGTLDTLMWGMLNRKTQVTGSTLNGRKEQ 491 >gi|294083751|ref|YP_003550508.1| hypothetical protein SAR116_0181 [Candidatus Puniceispirillum marinum IMCC1322] gi|292663323|gb|ADE38424.1| hypothetical protein SAR116_0181 [Candidatus Puniceispirillum marinum IMCC1322] Length = 1130 Score = 70.4 bits (171), Expect = 1e-10, Method: Composition-based stats. Identities = 39/187 (20%), Positives = 67/187 (35%), Gaps = 29/187 (15%) Query: 17 GENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKA-LEVIIEKANAAPIIVAY 75 E I+A SKT + L+ ++ EK + K + L ++ + Sbjct: 811 DEYIKASARLSKTFEILE----RIHKQNEKVLIFLESRKFQVVLASLVRE---------- 856 Query: 76 HFNSDLA-RLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVF 134 F D + + G + T Q G ++ P + G GL L N ++ Sbjct: 857 KFKMDHSPLIINGLISGEARQERVNTFQSNPIG-FDVMIISPKAGGVGLTLT-AANNVIH 914 Query: 135 FSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQN------TIDELVLQRLRTKS 188 WW+ Q +R + G + V VY IA+N + D ++ + L K Sbjct: 915 LERWWNPAVEDQCTDR-----AYRIGQTKTVNVYTPIAKNGSFGEKSFDCILDRLLNEKR 969 Query: 189 TIQDLLL 195 +I L Sbjct: 970 SIAKGLF 976 >gi|157870051|ref|XP_001683576.1| DNA helicase [Leishmania major strain Friedlin] gi|68126642|emb|CAJ04339.1| putative DNA helicase [Leishmania major strain Friedlin] Length = 1029 Score = 70.4 bits (171), Expect = 1e-10, Method: Composition-based stats. Identities = 34/176 (19%), Positives = 62/176 (35%), Gaps = 27/176 (15%) Query: 51 VHDEKIKALEV----IIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTLD--------- 95 KI A++ I+E+ + +I+ H + L+ A R Sbjct: 459 TARAKIPAVQDYVSGIVEQHLDSGEKLILFAHHQCMMEALRSAVEAVRPRQPIDYIYISG 518 Query: 96 ------KDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIE 149 ++P E + S G G N + +VF L W+ H Q + Sbjct: 519 DTPPAQREPAAEHFRTEATCTVAILSMQSSGIGHNFTC-ASTVVFTELDWNPSTHLQCED 577 Query: 150 RIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIHV 205 R+ + G + + YL+A+ T D ++ L+TK ++ + K V Sbjct: 578 RV-----HRIGQAQPCHIKYLLAEGTSDSVIWPLLQTKLSVTAAMFETSKMTGAEV 628 >gi|294676841|ref|YP_003577456.1| SNF2 family helicase [Rhodobacter capsulatus SB 1003] gi|294475661|gb|ADE85049.1| helicase, SNF2 family [Rhodobacter capsulatus SB 1003] Length = 1030 Score = 70.4 bits (171), Expect = 1e-10, Method: Composition-based stats. Identities = 25/137 (18%), Positives = 46/137 (33%), Gaps = 27/137 (19%) Query: 52 HDEKIKALEVIIEK--ANAAPIIVA-------YHFNSD------LARLQKAFPQGRTLDK 96 ++ A I+ + A +V Y F LAR+ + + Sbjct: 811 ASARLSATFDILRQIRARGERALVFIENRQMQYRFIEIARAEFGLARI-DLINGDTPIAQ 869 Query: 97 DPCTIQEWNE-----GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERI 151 + + G LL P + G GL L + ++ S WW+ +Q +R+ Sbjct: 870 RQQIVNRFQAHLEDGGGFDLLVLGPKAAGTGLTLTAATH-VIHLSRWWNPAVEEQCNDRV 928 Query: 152 GVTRQRQAGFKRAVFVY 168 + G R V ++ Sbjct: 929 -----HRLGQTRPVQIH 940 >gi|224101205|ref|XP_002312184.1| chromatin remodeling complex subunit [Populus trichocarpa] gi|222852004|gb|EEE89551.1| chromatin remodeling complex subunit [Populus trichocarpa] Length = 1234 Score = 70.4 bits (171), Expect = 1e-10, Method: Composition-based stats. Identities = 30/142 (21%), Positives = 58/142 (40%), Gaps = 18/142 (12%) Query: 55 KIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFA 114 ++ E I I+V +L F +GR +DK G +L A Sbjct: 1067 FLELFENIFRWQQGKEILV---LTGELE----LFERGRVMDKFEEL-----GGPSRVLLA 1114 Query: 115 HPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQN 174 +C G++L + ++ W+ + +Q I R + G ++ V+VY L+A Sbjct: 1115 SITACAEGISLT-AASRVILLDSEWNPSKTKQAIAR-----AFRPGQQKMVYVYQLLATG 1168 Query: 175 TIDELVLQRLRTKSTIQDLLLN 196 T++E +R K + ++ + Sbjct: 1169 TVEEDKYRRTAWKEWVSRMIFS 1190 >gi|303312659|ref|XP_003066341.1| Helicase conserved C-terminal domain containing protein [Coccidioides posadasii C735 delta SOWgp] gi|240106003|gb|EER24196.1| Helicase conserved C-terminal domain containing protein [Coccidioides posadasii C735 delta SOWgp] Length = 458 Score = 70.4 bits (171), Expect = 1e-10, Method: Composition-based stats. Identities = 22/92 (23%), Positives = 41/92 (44%), Gaps = 7/92 (7%) Query: 99 CTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 I+E+ + I +L + + G GL+L + LWW+ QQ R+ Sbjct: 329 RDIEEFRTDPSIRVLISSLKAGGTGLSLTM-AEKCILIDLWWNEAMEQQAFCRLF----- 382 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKST 189 + G K+ V + + +N+ID+ + KS+ Sbjct: 383 RYGQKKEVEIVRITVKNSIDDRIQLIQNAKSS 414 >gi|30387275|ref|NP_848354.1| global transactivator [Choristoneura fumiferana MNPV] gi|4097928|gb|AAD10317.1| global transactivator [Choristoneura fumiferana MNPV] Length = 497 Score = 70.4 bits (171), Expect = 1e-10, Method: Composition-based stats. Identities = 29/195 (14%), Positives = 66/195 (33%), Gaps = 33/195 (16%) Query: 28 KTVKCLQLANGAVYYDEEKHWKEVHD------------EKIKALEVIIEKANAAPIIVAY 75 + Q+ +KE ++ ++ +++ + ++V Sbjct: 295 LLCRLRQMCCHPALTKCSAMFKEHARIFEPAYESSKCRRVLELVQGVLDTMDDKVVLV-S 353 Query: 76 HFNSDLARLQKAFPQGRT----------LDKDPCTIQEWNEGK--IPLLFAHPASCGHGL 123 + L + Q +++ ++N +L G GL Sbjct: 354 QWVEFLQLVAGLLRQRGVPVLLYTGTLRVEERTAVENQFNAADSRYRVLLMSIKCGGVGL 413 Query: 124 NLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIA--QNTIDELVL 181 NL G N ++ W+ + Q +RI + G K+ FVY ++ +N+I+ + Sbjct: 414 NLTGG-NHIIMLEPHWNPQIELQAQDRI-----HRMGQKKRTFVYKMLVDEENSIERYMK 467 Query: 182 QRLRTKSTIQDLLLN 196 R K T + + + Sbjct: 468 ARQDKKLTFVNKVFD 482 >gi|149184885|ref|ZP_01863202.1| hypothetical protein ED21_17567 [Erythrobacter sp. SD-21] gi|148830996|gb|EDL49430.1| hypothetical protein ED21_17567 [Erythrobacter sp. SD-21] Length = 1270 Score = 70.4 bits (171), Expect = 1e-10, Method: Composition-based stats. Identities = 20/110 (18%), Positives = 39/110 (35%), Gaps = 16/110 (14%) Query: 96 KDPCTIQEWNE--GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGV 153 K + + +L P + G GL + N ++ S WW+ Q +R Sbjct: 856 KRQEMVTAFQSSPASFDVLILSPKAGGVGLTIT-AANNVIHLSRWWNPAVEDQATDR--- 911 Query: 154 TRQRQAGFKRAVFVY--------YLIAQNTIDELVLQRLRTKSTIQDLLL 195 + G R V ++ I ++ D+ + + K ++ LL Sbjct: 912 --AYRIGQTRPVTIHIPMAVHPDEAIGPSSFDQRLDALMERKRSLSRGLL 959 >gi|121582847|ref|YP_973289.1| SNF2-related protein [Polaromonas naphthalenivorans CJ2] gi|120596109|gb|ABM39547.1| SNF2-related protein [Polaromonas naphthalenivorans CJ2] Length = 1259 Score = 70.4 bits (171), Expect = 1e-10, Method: Composition-based stats. Identities = 31/154 (20%), Positives = 57/154 (37%), Gaps = 27/154 (17%) Query: 65 KANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD----------------PCTIQEWNE-G 107 ++ I+ F + LQ + L D I+ + Sbjct: 935 QSQGEKAIIFCEFRNIQRLLQHYIEEVFALQADIINGDTSASASHSASRQKRIKAFQAKP 994 Query: 108 KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFV 167 ++ P + G G+N+Q N +V ++ W+ + Q +R + G R V+V Sbjct: 995 GFGVIILSPVAVGFGVNIQ-AANHVVHYTRTWNPAKEDQASDRAW-----RIGQTRDVYV 1048 Query: 168 YYLI--AQN--TIDELVLQRLRTKSTIQDLLLNA 197 Y + AQ+ T D + Q L K ++ +LN Sbjct: 1049 YCPVVAAQDFTTFDVKLDQLLERKRSLAGDMLNG 1082 >gi|218189914|gb|EEC72341.1| hypothetical protein OsI_05562 [Oryza sativa Indica Group] Length = 2184 Score = 70.4 bits (171), Expect = 1e-10, Method: Composition-based stats. Identities = 29/167 (17%), Positives = 57/167 (34%), Gaps = 28/167 (16%) Query: 28 KTVKCLQL---ANGAVYYDE-----EKHWKEVHDEKIKALEVIIEKAN--AAPIIVAYHF 77 KC++L N + K + K+ L+ I+ K + +++ Sbjct: 1259 LNNKCMELRKVCNHPLLSYPFMNYYGKDFIIRSCGKLWNLDRILIKLHRSGHRVLLFSTM 1318 Query: 78 NSDLARLQ----------KAFPQGRTLDKDPCTIQEWNEG--KIPLLFAHPASCGHGLNL 125 L L+ + +L+ I ++N + + G GLNL Sbjct: 1319 TKLLDILEEYLQWRQLVYRRIDGTTSLEDRESAIVDFNRPNSDCFIFLLSIRAAGRGLNL 1378 Query: 126 QYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIA 172 Q + +V + + + +Q + R + G R V V Y+ A Sbjct: 1379 Q-SADTVVIYDPDPNPQNEEQAVAR-----AHRIGQTRDVKVIYMEA 1419 >gi|145498258|ref|XP_001435117.1| hypothetical protein [Paramecium tetraurelia strain d4-2] gi|124402246|emb|CAK67720.1| unnamed protein product [Paramecium tetraurelia] Length = 1210 Score = 70.4 bits (171), Expect = 1e-10, Method: Composition-based stats. Identities = 27/159 (16%), Positives = 58/159 (36%), Gaps = 19/159 (11%) Query: 43 DEEKHWKEVHDEKIKAL--EVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTL------ 94 ++ K K K++A+ + I + +++ + + F + + Sbjct: 1031 EDLKTLKFGLSSKLEAILNKTKIVQQQKEKVLIFTQSVDMIQLIDNLFQENGIVAFRITG 1090 Query: 95 ----DKDPCTIQEWNEGKIPL-LFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIE 149 +K I+++ E + + L + GLNL N + WW+ Q I Sbjct: 1091 QMSVEKREKVIKQFKESQDAIALLLSLRATSTGLNLTMANN-VFLVDPWWNPAIEDQAIG 1149 Query: 150 RIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKS 188 R + G + V V + +NTI++ + + K Sbjct: 1150 R-----ADRIGQQNQVKVVRFLCRNTIEQSINLLHQKKK 1183 >gi|256073537|ref|XP_002573086.1| harp (smarcal1)-related [Schistosoma mansoni] gi|238658258|emb|CAZ29318.1| harp (smarcal1)-related [Schistosoma mansoni] Length = 695 Score = 70.4 bits (171), Expect = 1e-10, Method: Composition-based stats. Identities = 33/157 (21%), Positives = 58/157 (36%), Gaps = 23/157 (14%) Query: 49 KEVHDEKIKALE----VIIEKANAAPIIVAYHFNSDLARLQKAFPQ---------GRTLD 95 E K+ A+E +IE ++ H L L K + GRT Sbjct: 460 HETGSVKLPAIEQYVLDLIEC--GHKFLLFAHHTDVLDSLDKLLSEKSIRFIRIDGRTNS 517 Query: 96 KDPCTI--QEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGV 153 + + E + + G GL+L N+++F L+W+ Q +R Sbjct: 518 EQRSVVCQIFQKEDDCRVALLSITAAGTGLHLT-AANLVIFAELFWNPGALVQAEDR--- 573 Query: 154 TRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 + G +V + YLIA+ T D+ + + K + Sbjct: 574 --AYRIGQMDSVLIRYLIAEQTADDFIWPLVERKLDV 608 >gi|325115083|emb|CBZ50639.1| aar147wp, related [Neospora caninum Liverpool] Length = 1866 Score = 70.4 bits (171), Expect = 1e-10, Method: Composition-based stats. Identities = 19/91 (20%), Positives = 35/91 (38%), Gaps = 6/91 (6%) Query: 97 DPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 D +Q G+ +L + GLNL + WW+ + Q ++RI Sbjct: 1617 DGRALQRQPGGEGRILLCSLKAGNVGLNLTR-ASRCYLMDGWWNPQVENQAMKRIW---- 1671 Query: 157 RQAGFKRAVFVYYLIAQNTIDELVLQRLRTK 187 + G + V V + T++E + + K Sbjct: 1672 -RFGQDKPVKVVRFVCVRTVEERLEEIKEFK 1701 >gi|299531998|ref|ZP_07045397.1| helicase, putative [Comamonas testosteroni S44] gi|298720034|gb|EFI60992.1| helicase, putative [Comamonas testosteroni S44] Length = 188 Score = 70.4 bits (171), Expect = 1e-10, Method: Composition-based stats. Identities = 24/106 (22%), Positives = 47/106 (44%), Gaps = 10/106 (9%) Query: 96 KDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTR 155 + +L P + G G+N+Q N +V ++ W+ + Q +R Sbjct: 29 RQKRIKAFQEAPGFGVLVLSPVAVGFGVNIQ-AANHVVHYTRTWNPAKEDQATDR----- 82 Query: 156 QRQAGFKRAVFVYYLI--AQN--TIDELVLQRLRTKSTIQDLLLNA 197 ++G K+ V+VYY + A++ T D + + L K + + +LN Sbjct: 83 AYRSGQKKDVYVYYPVVWAEDFTTFDVKLDRLLTYKRGLAEDMLNG 128 >gi|207343185|gb|EDZ70726.1| YLR032Wp-like protein [Saccharomyces cerevisiae AWRI1631] Length = 1126 Score = 70.4 bits (171), Expect = 1e-10, Method: Composition-based stats. Identities = 22/135 (16%), Positives = 47/135 (34%), Gaps = 23/135 (17%) Query: 53 DEKIKALEVIIEKANAAPIIVAYHFNSDLARLQK--------------AFPQGRTLDKDP 98 +K L+++ + + +++ F++ L L+K F +L + Sbjct: 998 TALLKELQLLQDSSAGEQVVIFSQFSTYLDILEKELTHTFSKDVAKIYKFDGRLSLKERT 1057 Query: 99 CTIQEWNEGK---IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTR 155 + ++ +L + G GLNL + + WW Q I+R+ Sbjct: 1058 SVLADFAVKDYSRQKILLLSLKAGGVGLNLTCASHAYMM-DPWWSPSMEDQAIDRL---- 1112 Query: 156 QRQAGFKRAVFVYYL 170 + G +V V Sbjct: 1113 -HRIGQTNSVKVMRF 1126 >gi|56964261|ref|YP_175992.1| DNA/RNA helicase [Bacillus clausii KSM-K16] gi|56910504|dbj|BAD65031.1| SNF2 family DNA/RNA helicase [Bacillus clausii KSM-K16] Length = 559 Score = 70.4 bits (171), Expect = 2e-10, Method: Composition-based stats. Identities = 34/197 (17%), Positives = 75/197 (38%), Gaps = 16/197 (8%) Query: 7 FQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKA 66 +REL + + N K + + GA+ + K + +I+K Sbjct: 307 LKRELCSSREAVFVTLKNMIDKYEQ-EEKETGAIVELLNEATAVDGHAKAEKALELIQKI 365 Query: 67 NAAPIIVAYHFNSDLARLQKAFPQ-----GRTLDKDPCTIQEWNEG---KIPLLFAHPAS 118 + +I+ + + LQ Q ++W K + + Sbjct: 366 DDK-VIIFTEYRATQLYLQWFLKQHGITSVPFRGGFKRGKKDWMRELFQKHAQVLIATEA 424 Query: 119 CGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDE 178 G G+NLQ+ + ++ + L W+ +Q I R+ + G + V +Y Q+T+++ Sbjct: 425 GGEGINLQF-CHHIINYDLPWNPMRVEQRIGRL-----HRLGQEHDVRIYNFAVQHTVEQ 478 Query: 179 LVLQRLRTKSTIQDLLL 195 +L+ L K + + ++ Sbjct: 479 HILELLYEKIHLFESVI 495 >gi|328848699|gb|EGF97901.1| hypothetical protein MELLADRAFT_84173 [Melampsora larici-populina 98AG31] Length = 206 Score = 70.4 bits (171), Expect = 2e-10, Method: Composition-based stats. Identities = 21/95 (22%), Positives = 39/95 (41%), Gaps = 10/95 (10%) Query: 86 KAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQ 145 + PQ R L + N I + G GLN+ + + W+ + Q Sbjct: 85 EMTPQERIL----QLNRFQNNNNIEAFIVSIEAGGVGLNMTC-ADEVYLMDAHWNSQIVQ 139 Query: 146 QMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELV 180 Q I+R+ Q G V VY+++A ++++ + Sbjct: 140 QAIDRL-----HQIGQTHPVKVYHVVAGGSVEQHL 169 >gi|319945477|ref|ZP_08019737.1| helicase [Lautropia mirabilis ATCC 51599] gi|319741263|gb|EFV93690.1| helicase [Lautropia mirabilis ATCC 51599] Length = 1109 Score = 70.4 bits (171), Expect = 2e-10, Method: Composition-based stats. Identities = 28/111 (25%), Positives = 47/111 (42%), Gaps = 11/111 (9%) Query: 92 RTLDKDPCTIQEWNE-GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 R +D I+ + E +L P + G G+N+Q N +V + W+ + Q +R Sbjct: 984 RNVDSRQKRIRAFQEKPGFGVLILSPVAVGFGVNIQ-AANHVVHYMRTWNPAKEDQATDR 1042 Query: 151 IGVTRQRQAGFKRAVFVYY-LIAQN---TIDELVLQRLRTKSTIQDLLLNA 197 + G + V VYY +A + T D + Q L K + +LN Sbjct: 1043 -----AYRIGQTKDVHVYYPTVAADDFVTFDVRLDQLLTKKRELAGDMLNG 1088 >gi|224165209|ref|XP_002338786.1| hypothetical protein POPTRDRAFT_795191 [Populus trichocarpa] gi|222873460|gb|EEF10591.1| hypothetical protein POPTRDRAFT_795191 [Populus trichocarpa] Length = 101 Score = 70.4 bits (171), Expect = 2e-10, Method: Composition-based stats. Identities = 23/79 (29%), Positives = 38/79 (48%), Gaps = 6/79 (7%) Query: 110 PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYY 169 P L A+ G G+NL + + WW+ E +Q I+R+ Q G ++ V + Sbjct: 13 PTLLANVKVSGAGINLT-AASEVYLMEPWWNSEFEEQAIDRV-----HQYGQEKNVIIVR 66 Query: 170 LIAQNTIDELVLQRLRTKS 188 LI Q++I+E +L K Sbjct: 67 LIVQDSIEERILMMQERKK 85 >gi|74217178|dbj|BAC34934.2| unnamed protein product [Mus musculus] Length = 445 Score = 70.4 bits (171), Expect = 2e-10, Method: Composition-based stats. Identities = 15/75 (20%), Positives = 37/75 (49%), Gaps = 6/75 (8%) Query: 122 GLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVL 181 G+NL ++++ + W+ + Q ++R + G + V V+ I NT++E ++ Sbjct: 2 GINL-ATADVVILYDSDWNPQVDLQAMDR-----AHRIGQTKTVRVFRFITDNTVEERIV 55 Query: 182 QRLRTKSTIQDLLLN 196 +R K + +++ Sbjct: 56 ERAEMKLRLDSIVIQ 70 >gi|240103680|ref|YP_002959989.1| Type III restriction endonuclease, res subunit [Thermococcus gammatolerans EJ3] gi|239911234|gb|ACS34125.1| Type III restriction endonuclease, res subunit [Thermococcus gammatolerans EJ3] Length = 1100 Score = 70.4 bits (171), Expect = 2e-10, Method: Composition-based stats. Identities = 33/165 (20%), Positives = 66/165 (40%), Gaps = 30/165 (18%) Query: 53 DEKIKALEVII-----EKANAAPIIVAYHFNSDLARLQKAFPQ-------------GRTL 94 + K+K L + E I++ F L L + T Sbjct: 465 ETKLKKLRETLDFIAREHGEKEKILIFTEFKDTLEYLVNKLQEWGYTVTFIHGEMDMETR 524 Query: 95 DKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 + +EW + + + G G+NLQ+ ++L+ + + W+ +Q I R+ Sbjct: 525 LQREKDFREWAQ-----VMVATEAAGEGINLQF-CHLLINYDIPWNPNRLEQRIGRV--- 575 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTK-STIQDLLLNAL 198 + G + V ++ +A+NT + +VL+RL K I+ L + + Sbjct: 576 --HRYGQRYPVHIFNFVARNTREGMVLERLLHKIEEIRKALGDKV 618 >gi|41052581|dbj|BAD07923.1| SNF2 domain/helicase domain-containing protein-like [Oryza sativa Japonica Group] gi|41052776|dbj|BAD07645.1| SNF2 domain/helicase domain-containing protein-like [Oryza sativa Japonica Group] gi|222622037|gb|EEE56169.1| hypothetical protein OsJ_05089 [Oryza sativa Japonica Group] Length = 2200 Score = 70.4 bits (171), Expect = 2e-10, Method: Composition-based stats. Identities = 29/167 (17%), Positives = 57/167 (34%), Gaps = 28/167 (16%) Query: 28 KTVKCLQL---ANGAVYYDE-----EKHWKEVHDEKIKALEVIIEKAN--AAPIIVAYHF 77 KC++L N + K + K+ L+ I+ K + +++ Sbjct: 1259 LNNKCMELRKVCNHPLLSYPFMNYYGKDFIIRSCGKLWNLDRILIKLHRSGHRVLLFSTM 1318 Query: 78 NSDLARLQ----------KAFPQGRTLDKDPCTIQEWNEG--KIPLLFAHPASCGHGLNL 125 L L+ + +L+ I ++N + + G GLNL Sbjct: 1319 TKLLDILEEYLQWRQLVYRRIDGTTSLEDRESAIVDFNRPNSDCFIFLLSIRAAGRGLNL 1378 Query: 126 QYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIA 172 Q + +V + + + +Q + R + G R V V Y+ A Sbjct: 1379 Q-SADTVVIYDPDPNPQNEEQAVAR-----AHRIGQTRDVKVIYMEA 1419 >gi|77164180|ref|YP_342705.1| DEAD/DEAH family helicase [Nitrosococcus oceani ATCC 19707] gi|254436075|ref|ZP_05049582.1| Helicase conserved C-terminal domain protein [Nitrosococcus oceani AFC27] gi|76882494|gb|ABA57175.1| helicase, DEAD/DEAH box family [Nitrosococcus oceani ATCC 19707] gi|207089186|gb|EDZ66458.1| Helicase conserved C-terminal domain protein [Nitrosococcus oceani AFC27] Length = 760 Score = 70.4 bits (171), Expect = 2e-10, Method: Composition-based stats. Identities = 47/206 (22%), Positives = 75/206 (36%), Gaps = 28/206 (13%) Query: 8 QRELYCDLQGENIEAFN------SASKTVKCLQ-LANGAVYYDEEKHWKEVHDEKIKALE 60 + ELY D + A + +K L+ A G V +K W+E+ E Sbjct: 24 EYELYADQVVDQATAAETIPELEAEILILKDLEHQALGVVQSGNDKKWEELSHLLQDRPE 83 Query: 61 VIIEKANAAPIIVAYHFNSDLARLQKAFPQ-------------GRTLDKDPCTIQEW-NE 106 + E + +I+ L L G D +E+ N Sbjct: 84 MYTESGSRRKLIIFTEHKDTLNYLVGRIRGMLGNPEAVITIHGGVNRDDRRKAQEEFRNN 143 Query: 107 GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVF 166 + +L A + G G+NLQ N++V + L W+ +Q RI + G Sbjct: 144 RDVQVLVA-TDAAGEGVNLQN-ANLMVNYDLPWNPNRLEQRFGRI-----HRIGQTEVCH 196 Query: 167 VYYLIAQNTIDELVLQRLRTKSTIQD 192 ++ LIA T + V QRL K I+ Sbjct: 197 LWNLIASETREGEVFQRLFDKIEIEK 222 >gi|242209777|ref|XP_002470734.1| predicted protein [Postia placenta Mad-698-R] gi|220730204|gb|EED84065.1| predicted protein [Postia placenta Mad-698-R] Length = 998 Score = 70.4 bits (171), Expect = 2e-10, Method: Composition-based stats. Identities = 24/97 (24%), Positives = 39/97 (40%), Gaps = 10/97 (10%) Query: 92 RTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERI 151 + D+ P + + + + + G GLNL G N +V F Q I+R Sbjct: 668 KAQDRMPLIDKFHEDPDVFVFLISTMAGGTGLNLT-GANKVVIFDP----AHDLQAIDR- 721 Query: 152 GVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKS 188 + G R V V+ L+ +I+EL+ R K Sbjct: 722 ----AYRFGQTRDVSVFRLLGAGSIEELIYARQVYKQ 754 >gi|281337653|gb|EFB13237.1| hypothetical protein PANDA_009544 [Ailuropoda melanoleuca] Length = 1008 Score = 70.0 bits (170), Expect = 2e-10, Method: Composition-based stats. Identities = 33/167 (19%), Positives = 65/167 (38%), Gaps = 20/167 (11%) Query: 49 KEVHDEKIKALEVIIE---KANAAPIIVAYHFNSDLARLQKAFPQGRTL----------- 94 K+ K A++ I+ + ++ +V H S L +A + + Sbjct: 256 KQTAIAKAGAVKDYIKMMLQNDSLKFLVFAHHLSMLQACTEAVIENKARYIRIDGSVPSS 315 Query: 95 DKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 ++ Q + + + G GL + +VF L+WD +Q +R Sbjct: 316 ERIHLVNQFQKDPDTRVAILSIQAAGQGLTFTAATH-VVFAELYWDPGHIKQAEDR---- 370 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 + G +V ++YL+A T+D L+ L K+ + LN K++ Sbjct: 371 -AHRIGQCTSVNIHYLVANGTLDTLMWGMLNRKTQVTGSTLNGRKEQ 416 >gi|254478047|ref|ZP_05091431.1| Type III restriction enzyme, res subunit family [Carboxydibrachium pacificum DSM 12653] gi|214036051|gb|EEB76741.1| Type III restriction enzyme, res subunit family [Carboxydibrachium pacificum DSM 12653] Length = 881 Score = 70.0 bits (170), Expect = 2e-10, Method: Composition-based stats. Identities = 30/157 (19%), Positives = 66/157 (42%), Gaps = 24/157 (15%) Query: 49 KEVHDEKIKALEVIIEK----ANAAPIIVAYHFNSDLARLQKAFPQGR----------TL 94 ++ D K+ L ++ K + ++ F + L++ + + Sbjct: 446 RQFFDVKLDTLFDLLFKVRLGESDVKFLIFTEFRATQDYLREMLQKRGYKVVVLNGSMDI 505 Query: 95 DKDPCTIQEWNEG-KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGV 153 + ++E+ E I + + G GLNLQ+ +I++ + + W+ + +Q I R+ Sbjct: 506 GERKAALKEFEEAADIMV---STDAGGEGLNLQF-CHIVINYDMPWNPMKIEQRIGRVD- 560 Query: 154 TRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 + G + VFV+ I + TI+ V + L K + Sbjct: 561 ----RIGQTKDVFVFNFILEETIENRVRKVLEEKLEV 593 >gi|194752217|ref|XP_001958419.1| GF23531 [Drosophila ananassae] gi|190625701|gb|EDV41225.1| GF23531 [Drosophila ananassae] Length = 1272 Score = 70.0 bits (170), Expect = 2e-10, Method: Composition-based stats. Identities = 26/191 (13%), Positives = 61/191 (31%), Gaps = 15/191 (7%) Query: 5 HKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIE 64 ++ + I +S + + A+ D + ++ +K I Sbjct: 1065 ENMKKSTLHGISKCPICRQDSPQLYYSVRRESGIAIAGDFSTKISNIVEQVLK----IRS 1120 Query: 65 KANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD---PCTIQEWNEGKIPL--LFAHPASC 119 I++ + + L ++ KA + ++ + + L + Sbjct: 1121 ANADEKILIFSQWQAILFQISKALALNNVKFRSKCIEQDFADFKNPDLNITCLLMPLSKG 1180 Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 GLNL + + + + +Q I RI + G + V+ I TI+E Sbjct: 1181 SKGLNLIEATH-VFLVEPILNPGDEKQAIGRI-----HRFGQTKPTKVHRFIVNGTIEEN 1234 Query: 180 VLQRLRTKSTI 190 +L + + Sbjct: 1235 ILSLITSADDT 1245 >gi|328849920|gb|EGF99092.1| hypothetical protein MELLADRAFT_94926 [Melampsora larici-populina 98AG31] Length = 203 Score = 70.0 bits (170), Expect = 2e-10, Method: Composition-based stats. Identities = 21/95 (22%), Positives = 39/95 (41%), Gaps = 10/95 (10%) Query: 86 KAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQ 145 + PQ RTL + N I + G GLN+ + + W+ + Q Sbjct: 85 EMTPQERTL----QLNRFQNNNNIEAFIVSIEAGGVGLNMTC-ADEVYLMDAHWNPQIVQ 139 Query: 146 QMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELV 180 Q I+ + Q G V VY+++A ++++ + Sbjct: 140 QAIDHL-----HQIGQTHPVKVYHVVAGGSVEQHL 169 >gi|242819355|ref|XP_002487301.1| SNF2 family helicase/ATPase, putative [Talaromyces stipitatus ATCC 10500] gi|218713766|gb|EED13190.1| SNF2 family helicase/ATPase, putative [Talaromyces stipitatus ATCC 10500] Length = 1114 Score = 70.0 bits (170), Expect = 2e-10, Method: Composition-based stats. Identities = 23/146 (15%), Positives = 51/146 (34%), Gaps = 18/146 (12%) Query: 72 IVAYHFNSDLARLQKAFPQGRT-----------LDKDPCTIQEW-NEGKIPLLFAHPASC 119 ++ + S L ++ A L + + + I +L A + Sbjct: 962 VIFSGWTSHLDLIEIALKDHGLNGFTRIDGTMSLAARKAALNSFAEDKDITILLATIGAG 1021 Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 G GLNL + + ++ Q ++R+ + G R V I + +I+E Sbjct: 1022 GVGLNLTSASRVYIM-EPQYNPAAVAQAVDRV-----HRLGQTREVTTVQFIMKASIEEK 1075 Query: 180 VLQRLRTKSTIQDLLLNALKKETIHV 205 + + + K + + + K + V Sbjct: 1076 IFEMAKKKQQLAEDSMARGKLDKREV 1101 >gi|118396328|ref|XP_001030505.1| Helicase conserved C-terminal domain containing protein [Tetrahymena thermophila] gi|89284810|gb|EAR82842.1| Helicase conserved C-terminal domain containing protein [Tetrahymena thermophila SB210] Length = 908 Score = 70.0 bits (170), Expect = 2e-10, Method: Composition-based stats. Identities = 32/158 (20%), Positives = 62/158 (39%), Gaps = 20/158 (12%) Query: 54 EKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQKAFP------------QGRTLDKDPC 99 K+ L+ I+ N IIV H N L +L+ + ++ Sbjct: 207 AKLHELKNYIKDLLENDIKIIVFAHHNEMLNQLENFVQNELQLKFIRIDGKVAPKERHER 266 Query: 100 TIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQA 159 Q + ++ + + GL L NI VF + W QQ +R + Sbjct: 267 VQQFQTDPQVKVAILSLLAASTGLTLTASSNI-VFAEMNWTPAIMQQAEDR-----AHRI 320 Query: 160 GFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 G + +V +Y++ + T+D+L+ +++ K I +L+ Sbjct: 321 GQENSVLCHYILGEKTLDDLLYKKIEQKIAIVSNILDG 358 >gi|145481069|ref|XP_001426557.1| hypothetical protein [Paramecium tetraurelia strain d4-2] gi|124393632|emb|CAK59159.1| unnamed protein product [Paramecium tetraurelia] Length = 746 Score = 70.0 bits (170), Expect = 2e-10, Method: Composition-based stats. Identities = 28/159 (17%), Positives = 57/159 (35%), Gaps = 19/159 (11%) Query: 54 EKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQK----------AFPQGRTLDKDPCTI 101 KIKA++ I N + H L +Q+ ++++ + Sbjct: 405 AKIKAIKDYINTLFENEIKFLFFAHHQDVLDAVQEYCVENNIQYMRIDGSVSIEQRHLNV 464 Query: 102 QEWNEGK-IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 Q + + I + S +G+ L + +VF + W Q +R + G Sbjct: 465 QMFQNNEAIRIAILSVTSANYGITLT-AASTIVFGEMHWTPAIMMQAEDR-----AHRIG 518 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 + V +YLI T+D+ + ++ K ++ K Sbjct: 519 QVQCVDCHYLIGDGTLDDHIFNKIENKMNTVSNFIDGQK 557 >gi|260948488|ref|XP_002618541.1| hypothetical protein CLUG_02000 [Clavispora lusitaniae ATCC 42720] gi|238848413|gb|EEQ37877.1| hypothetical protein CLUG_02000 [Clavispora lusitaniae ATCC 42720] Length = 980 Score = 70.0 bits (170), Expect = 2e-10, Method: Composition-based stats. Identities = 29/172 (16%), Positives = 59/172 (34%), Gaps = 23/172 (13%) Query: 47 HWKEVHDEKIKALEV-IIE-KANAAPIIVAYHFNSDLARLQKAFPQGRT----------L 94 K+ L ++E + IV + F L ++ Sbjct: 707 QILGTASAKLSYLSSRLVEHQLEGVKSIVFFEFEDSAYYLAESLDILGVNYILYATFVGA 766 Query: 95 DKDPCTIQEWNEGKIP-----LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIE 149 + + ++++ + L HGL + + F S W Q I+ Sbjct: 767 GQRANNLSDFDDHDVEKNGGITLIMDLRLAAHGLTI-ISATRVYFTSPVWSRSVEAQAIK 825 Query: 150 RIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 R + G K VFV L+ + T++E + +R +T + +++ LK + Sbjct: 826 R-----AHRIGQKNEVFVETLVLKGTLEEEIYKRRQTDNAADSSVVDDLKMQ 872 >gi|320033549|gb|EFW15496.1| conserved hypothetical protein [Coccidioides posadasii str. Silveira] Length = 1107 Score = 70.0 bits (170), Expect = 2e-10, Method: Composition-based stats. Identities = 22/92 (23%), Positives = 41/92 (44%), Gaps = 7/92 (7%) Query: 99 CTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 I+E+ + I +L + + G GL+L + LWW+ QQ R+ Sbjct: 978 RDIEEFRTDPSIRVLISSLKAGGTGLSLTM-AEKCILIDLWWNEAMEQQAFCRLF----- 1031 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKST 189 + G K+ V + + +N+ID+ + KS+ Sbjct: 1032 RYGQKKEVEIVRITVKNSIDDRIQLIQNAKSS 1063 >gi|302853578|ref|XP_002958303.1| hypothetical protein VOLCADRAFT_48099 [Volvox carteri f. nagariensis] gi|300256328|gb|EFJ40596.1| hypothetical protein VOLCADRAFT_48099 [Volvox carteri f. nagariensis] Length = 77 Score = 70.0 bits (170), Expect = 2e-10, Method: Composition-based stats. Identities = 21/82 (25%), Positives = 34/82 (41%), Gaps = 6/82 (7%) Query: 113 FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIA 172 + G NL +++ F L W+ + Q I RI + G R FVY L+ Sbjct: 2 LVSSKAGSLGTNLTSACRMVI-FDLPWNPVFNAQAIARI-----YRFGQTRPTFVYRLLY 55 Query: 173 QNTIDELVLQRLRTKSTIQDLL 194 T++ELV K + + + Sbjct: 56 AATLEELVYDLNVDKEELFNKV 77 >gi|163731714|ref|ZP_02139161.1| hypothetical protein RLO149_20459 [Roseobacter litoralis Och 149] gi|161395168|gb|EDQ19490.1| hypothetical protein RLO149_20459 [Roseobacter litoralis Och 149] Length = 915 Score = 70.0 bits (170), Expect = 2e-10, Method: Composition-based stats. Identities = 26/137 (18%), Positives = 45/137 (32%), Gaps = 24/137 (17%) Query: 50 EVHDEKIKALEVIIE--KANAAPIIVA-------YHFNSDLAR---LQKAFPQGRTLDKD 97 + A+ I+ K+ +V F L L G T D Sbjct: 633 VGASARTSAVMDILRFVKSKGERALVFVENRDIQAWFIEILNLEFGLNVMLINGDTSIDD 692 Query: 98 PCTIQEW------NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERI 151 I + ++ + +L P + G GL L N ++ + WW+ +Q +R Sbjct: 693 RQWITKQFQRERGDDNEFDVLVLGPRAAGTGLTLT-AANHVIHLTRWWNPAVEEQCNDR- 750 Query: 152 GVTRQRQAGFKRAVFVY 168 + G R V V+ Sbjct: 751 ----THRIGQTRPVTVH 763 >gi|169597871|ref|XP_001792359.1| hypothetical protein SNOG_01727 [Phaeosphaeria nodorum SN15] gi|111070256|gb|EAT91376.1| hypothetical protein SNOG_01727 [Phaeosphaeria nodorum SN15] Length = 861 Score = 70.0 bits (170), Expect = 2e-10, Method: Composition-based stats. Identities = 34/186 (18%), Positives = 68/186 (36%), Gaps = 25/186 (13%) Query: 13 CDLQGENIEAFNSASKTVKCLQ--LANGAVYYDEEKHWK----EVHDEKIKALEVIIEKA 66 ++ N A ++K + L+ L D +++ V + L++I Sbjct: 685 VTMRDNNGNASRYSAKVLALLRNLLTAHTPINDINENYIPAKSVVFSHSTRMLDLI---- 740 Query: 67 NAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEW-NEGKIPLLFAHPASCGHGLNL 125 P + Y F +L+ ++E+ + ++ A S G GL+L Sbjct: 741 --QPALSHYQFR------TCRIDGSTSLEGRSNVLREFSEDAHCAVMLATIGSAGEGLDL 792 Query: 126 QYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLR 185 ++ + W+ Q ++RI + G KR VFV I +I+ + + Sbjct: 793 TAANHVHI-IEPHWNPMAEAQAVDRI-----YRIGQKREVFVTRYIVPKSIETYIQWVQQ 846 Query: 186 TKSTIQ 191 K +Q Sbjct: 847 QKLKLQ 852 >gi|147789690|emb|CAN74059.1| hypothetical protein VITISV_024679 [Vitis vinifera] Length = 2238 Score = 70.0 bits (170), Expect = 2e-10, Method: Composition-based stats. Identities = 32/168 (19%), Positives = 60/168 (35%), Gaps = 28/168 (16%) Query: 27 SKTVKCLQL---ANGAV----YYDEEKHWKEVHDE-KIKALEVIIEKAN--AAPIIVAYH 76 + +C++L N + Y+++ V K+ L+ I+ K +++ Sbjct: 1280 TLNNRCMELRKACNHPLLNYPYFNDFSKDFLVRSCGKMWILDRILIKLQRTGHRVLLFST 1339 Query: 77 FNSDLA---------RLQKAFPQGRT-LDKDPCTIQEWNEG--KIPLLFAHPASCGHGLN 124 L RL G T L+ I ++N + + G GLN Sbjct: 1340 MTKLLDILEEYLQWRRLVYRRIDGTTSLEDRESAIVDFNSAGSDCFIFLLSIRAAGRGLN 1399 Query: 125 LQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIA 172 LQ + +V + + + +Q + R + G R V V Y+ A Sbjct: 1400 LQ-SADTVVIYDPDPNPKNEEQAVAR-----AHRIGQTREVKVIYMEA 1441 >gi|29567040|ref|NP_818603.1| gp65 [Mycobacterium phage Barnyard] gi|29425765|gb|AAN02119.1| gp65 [Mycobacterium phage Barnyard] Length = 653 Score = 70.0 bits (170), Expect = 2e-10, Method: Composition-based stats. Identities = 37/197 (18%), Positives = 79/197 (40%), Gaps = 27/197 (13%) Query: 2 KQYHKFQRELYCDLQG-----ENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKI 56 KQY + ++ L+ + + S ++ V+ Q+A A+ D + E+ KI Sbjct: 430 KQYDQILKDAVITLESLAGEKDEVVVNGSLAEMVRLKQVAGSALGLDVK---PELPSNKI 486 Query: 57 KALEVIIEK--ANAAPIIVAYHFNSDLAR---------LQKAFPQGRTLDKDPCTI--QE 103 + ++ + + + +VA F L ++ G+T+ + I + Sbjct: 487 EWIKNFLSERISAGTKTVVASQFTQFLELLSRECDKAGIRHYLYTGKTVGSERARIKHEF 546 Query: 104 WNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKR 163 +E ++ + S G L L +++V W ++ +Q +E R+R Sbjct: 547 QSESGEMVVLLNTKSGGLSLTLDAADDVVV-CDQTWIPDDQEQ-VENRAYGRER----DH 600 Query: 164 AVFVYYLIAQNTIDELV 180 V ++ L + TIDE + Sbjct: 601 NVNIWNLCSLGTIDEDI 617 >gi|26350683|dbj|BAC38978.1| unnamed protein product [Mus musculus] Length = 1069 Score = 70.0 bits (170), Expect = 2e-10, Method: Composition-based stats. Identities = 33/167 (19%), Positives = 65/167 (38%), Gaps = 20/167 (11%) Query: 49 KEVHDEKIKALEVIIE---KANAAPIIVAYHFNSDLARLQKAFPQGRTL----------- 94 K+ K A++ I+ + ++ +V H S L +A + ++ Sbjct: 316 KQTAIAKAGAVKDYIKMLLQNDSLKFLVFAHHLSMLQACTEAVIESKSRYIRIDGSVPSS 375 Query: 95 DKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 ++ Q + + + G GL + +VF L+WD +Q +R Sbjct: 376 ERIHLVNQFQKDPDTRVAILSIQAAGQGLTFT-AASHVVFAELYWDPGHIKQAEDR---- 430 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 + +V ++YLIA T+D L+ L K+ + LN K++ Sbjct: 431 -AHRIRQCSSVNIHYLIANGTLDSLMWAMLNRKAQVTGSTLNGRKEK 476 >gi|225454280|ref|XP_002276245.1| PREDICTED: hypothetical protein [Vitis vinifera] Length = 2268 Score = 70.0 bits (170), Expect = 2e-10, Method: Composition-based stats. Identities = 32/168 (19%), Positives = 60/168 (35%), Gaps = 28/168 (16%) Query: 27 SKTVKCLQL---ANGAV----YYDEEKHWKEVHDE-KIKALEVIIEKAN--AAPIIVAYH 76 + +C++L N + Y+++ V K+ L+ I+ K +++ Sbjct: 1310 TLNNRCMELRKACNHPLLNYPYFNDFSKDFLVRSCGKMWILDRILIKLQRTGHRVLLFST 1369 Query: 77 FNSDLA---------RLQKAFPQGRT-LDKDPCTIQEWNEG--KIPLLFAHPASCGHGLN 124 L RL G T L+ I ++N + + G GLN Sbjct: 1370 MTKLLDILEEYLQWRRLVYRRIDGTTSLEDRESAIVDFNSAGSDCFIFLLSIRAAGRGLN 1429 Query: 125 LQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIA 172 LQ + +V + + + +Q + R + G R V V Y+ A Sbjct: 1430 LQ-SADTVVIYDPDPNPKNEEQAVAR-----AHRIGQTREVKVIYMEA 1471 >gi|49387874|dbj|BAD26561.1| SNF2 domain-containing protein-like [Oryza sativa Japonica Group] Length = 602 Score = 70.0 bits (170), Expect = 2e-10, Method: Composition-based stats. Identities = 24/152 (15%), Positives = 56/152 (36%), Gaps = 24/152 (15%) Query: 62 IIEKANAAPIIVAYHFNSDLARLQK------AFPQGRTL---------DKDPCTIQEWNE 106 + E ++V + L+ + + +G + ++ +N+ Sbjct: 417 LCEAMKER-VLVFSQYLEPLSLIMDQLSKMFNWIEGEEILLMSGNVLVQNREALMEAFND 475 Query: 107 --GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA 164 ++ A +C G+ L G + +V + W+ + R + R + G ++ Sbjct: 476 MKSNAKVMLASTKACCEGITL-IGASRVVLLDVVWNPS-----VGRQAIGRAYRIGQEKI 529 Query: 165 VFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 V+ Y LI + T ++ R K + LL + Sbjct: 530 VYTYNLITEGTKEKDKYDRQAKKDHMSKLLFS 561 >gi|123477453|ref|XP_001321894.1| SNF2 family N-terminal domain containing protein [Trichomonas vaginalis G3] gi|121904729|gb|EAY09671.1| SNF2 family N-terminal domain containing protein [Trichomonas vaginalis G3] Length = 1354 Score = 70.0 bits (170), Expect = 2e-10, Method: Composition-based stats. Identities = 26/169 (15%), Positives = 59/169 (34%), Gaps = 24/169 (14%) Query: 26 ASKTVKCLQLANGAVYYDE-------EKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFN 78 S+ QL+ V+ + + H + +K++ L ++ E ++ Y+ Sbjct: 631 LSRLELLTQLSTKFVWLSKVLAELKRDNHKVLIFSQKVQLLHILREFC----MLSQYNNE 686 Query: 79 SDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLW 138 + + + +D+ + + + + GLNL + + F Sbjct: 687 LLIGEMSD-IEKSEAIDRYSKSPDSF------VFLISTRAGSEGLNLTV-ADTAIIFDPD 738 Query: 139 WDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTK 187 W+ + Q R+ + G + V V LI T + + R + K Sbjct: 739 WNPQNDLQAQARV-----HRIGQTQKVDVVRLITYQTYEHEMFVRAQRK 782 >gi|294889866|ref|XP_002772973.1| hypothetical protein Pmar_PMAR009695 [Perkinsus marinus ATCC 50983] gi|239877632|gb|EER04789.1| hypothetical protein Pmar_PMAR009695 [Perkinsus marinus ATCC 50983] Length = 247 Score = 70.0 bits (170), Expect = 2e-10, Method: Composition-based stats. Identities = 14/70 (20%), Positives = 36/70 (51%), Gaps = 5/70 (7%) Query: 127 YGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRT 186 G + ++F+ W+ +Q ++R + G R V ++ L++ +TI+E + + Sbjct: 17 SGADCVIFYDSDWNPAMDRQAMDRC-----HRIGQTRDVHIFRLLSHHTIEENIFHKQLQ 71 Query: 187 KSTIQDLLLN 196 K + D++++ Sbjct: 72 KRMLDDVVVD 81 >gi|303389620|ref|XP_003073042.1| Snf2/Rad54-like helicase [Encephalitozoon intestinalis ATCC 50506] gi|303302186|gb|ADM11682.1| Snf2/Rad54-like helicase [Encephalitozoon intestinalis ATCC 50506] Length = 556 Score = 70.0 bits (170), Expect = 2e-10, Method: Composition-based stats. Identities = 41/202 (20%), Positives = 77/202 (38%), Gaps = 28/202 (13%) Query: 6 KFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEK 65 KF+R++ +G+ + +L V + ++E KI ++ I Sbjct: 342 KFRRQVVLQCKGKQRDPAK---------ELVGENVDTNVVAQYREAVKLKIDQVKQYIST 392 Query: 66 --ANAAPIIVAYHFNSDLARLQKAF-PQGRTL----------DKDPCTIQEWNEGKIPLL 112 I+ H + L++ +G ++ ++ +I Sbjct: 393 IVEKDMKFIIFCHHVEMMDGLEEFLREKGVSIIRIDGSTPSSNRHMLVKSFQENEEIKTA 452 Query: 113 FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIA 172 +C GL L G +VF L+W+ Q +RI + G K +V + YL+A Sbjct: 453 LLSITACSTGLTLT-AGRAVVFAELYWNPGVLLQAEDRI-----HRIGQKNSVDIIYLVA 506 Query: 173 QNTIDELVLQRLRTKSTIQDLL 194 + TIDE V +L +K + + L Sbjct: 507 RGTIDEYVWPKLLSKLNVLESL 528 >gi|242042115|ref|XP_002468452.1| hypothetical protein SORBIDRAFT_01g046180 [Sorghum bicolor] gi|241922306|gb|EER95450.1| hypothetical protein SORBIDRAFT_01g046180 [Sorghum bicolor] Length = 976 Score = 69.6 bits (169), Expect = 2e-10, Method: Composition-based stats. Identities = 23/132 (17%), Positives = 49/132 (37%), Gaps = 22/132 (16%) Query: 63 IEKANAAPIIVAYHFNSDLARLQKAFPQGR---------------TLDKDPCTIQEWNE- 106 + +A ++V + L L+ F + + T ++ I+ +N Sbjct: 776 LSEAAGEKVLVFSQYVRSLHFLETLFTKMKGWKPGVNTFLMDGSSTQEQREQAIERFNNS 835 Query: 107 GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVF 166 K + F +CG G++L I++ + R + R + G + V+ Sbjct: 836 PKAKVFFGSIKACGEGISLVGASRIVILD------VHENPAVMRQAIGRAFRPGQSKVVY 889 Query: 167 VYYLIAQNTIDE 178 Y L+A + +E Sbjct: 890 CYRLVASGSSEE 901 >gi|28493085|ref|NP_787246.1| DNA helicase [Tropheryma whipplei str. Twist] gi|28476125|gb|AAO44215.1| DNA helicase [Tropheryma whipplei str. Twist] Length = 698 Score = 69.6 bits (169), Expect = 2e-10, Method: Composition-based stats. Identities = 24/120 (20%), Positives = 51/120 (42%), Gaps = 12/120 (10%) Query: 92 RTLDKDPCTIQEW-NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 +T + ++ + + + + G G+NLQ N +V L W E Q I+R Sbjct: 566 QTPNDRKNALRTFDEDPDTRVAICSLTAAGLGINLQVASN-VVLSELSWTAAEQGQAIDR 624 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA-----LKKETIHV 205 + + G V + ++ T+D + + +KS L L+ +++E++H+ Sbjct: 625 L-----HRIGQTEPVTAWRILGAGTVDIRMAALVDSKSNDAILSLDGGDMREVQQESLHI 679 >gi|156089377|ref|XP_001612095.1| helicase [Babesia bovis T2Bo] gi|154799349|gb|EDO08527.1| helicase conserved C-terminal domain containing protein [Babesia bovis] Length = 879 Score = 69.6 bits (169), Expect = 2e-10, Method: Composition-based stats. Identities = 29/140 (20%), Positives = 53/140 (37%), Gaps = 18/140 (12%) Query: 70 PIIVAYHFNSDLARLQKAFP---------QGRT--LDKDPCTIQEWNEGKIPLLFAHPAS 118 I+ H + +++ G T ++ + N K + + Sbjct: 716 KFIIFAHHMFMMDAIEQVLKAQHCCYMRIDGSTNAQQRESRVTEFQNNSKCRVALLSLTA 775 Query: 119 CGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVF-VYYLIAQNTID 177 CG GLNL + +VF L W + Q +R + G K + ++YLIA+ +I+ Sbjct: 776 CGVGLNLT-SSSTVVFAELHWVPGQMIQAEDR-----AHRMGTKHRIINIHYLIAEGSIE 829 Query: 178 ELVLQRLRTKSTIQDLLLNA 197 E + + + K LN Sbjct: 830 ETMWRVVSRKWETVTATLNG 849 >gi|302765060|ref|XP_002965951.1| hypothetical protein SELMODRAFT_60241 [Selaginella moellendorffii] gi|300166765|gb|EFJ33371.1| hypothetical protein SELMODRAFT_60241 [Selaginella moellendorffii] Length = 1108 Score = 69.6 bits (169), Expect = 2e-10, Method: Composition-based stats. Identities = 31/169 (18%), Positives = 59/169 (34%), Gaps = 28/169 (16%) Query: 26 ASKTVKCLQL--ANGAVYYDEEKHWKEVHDE------KIKALEVIIEKAN--AAPIIVAY 75 A KC++L Y + H + ++ K+ L+ I+ K +++ Sbjct: 315 APLQNKCMELRKVCNHPYLNYPPHCRLFNENMVRMCGKLWILDRILIKLQRSGHRVLLFS 374 Query: 76 HFNSDLARLQ----------KAFPQGRTLDKDPCTIQEWNEG--KIPLLFAHPASCGHGL 123 L L+ + LD I ++N + + + G GL Sbjct: 375 TMTKLLDILEDYLQWRGLIYRRIDGTTPLDSRETAIVDFNAPGSQCFIFLLSIRAAGRGL 434 Query: 124 NLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIA 172 NLQ + +V + + + +Q + R + G K V V Y+ A Sbjct: 435 NLQT-ADTVVIYDPDPNPKNEEQAVAR-----AHRIGQKSEVKVIYMEA 477 >gi|126337900|ref|XP_001367889.1| PREDICTED: similar to SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a-like 1 [Monodelphis domestica] Length = 965 Score = 69.6 bits (169), Expect = 2e-10, Method: Composition-based stats. Identities = 36/200 (18%), Positives = 73/200 (36%), Gaps = 28/200 (14%) Query: 8 QRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHW-----KEVHDEKI----KA 58 QR++ + + A AS ++A ++K + KI Sbjct: 675 QRKMVV-VALGQMSAKTRASLAAAAKEMATEKTSRRQQKEALLLFFHRTAEAKIQPATDY 733 Query: 59 LEVIIEKANAAPIIVAYHFNSDLARLQKAFPQ---------GRTLDKDPCTI-QEWN-EG 107 + ++E ++V H L L + G T D T+ Q++ Sbjct: 734 ILDLLES-GREKLLVFAHHKLVLDALSDELEKKHIGYIRIDGATSSSDRQTLCQQFQLSE 792 Query: 108 KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFV 167 K + + GL +++VF L+W+ Q +R+ + G +V + Sbjct: 793 KCAVAVLSITAANMGLTF-SATDLVVFAELFWNPGVLIQAEDRV-----HRIGQTSSVTI 846 Query: 168 YYLIAQNTIDELVLQRLRTK 187 +YL+A+ T D+ + ++ K Sbjct: 847 HYLVARGTADDYLWPLIQEK 866 >gi|329849600|ref|ZP_08264446.1| SNF2 family N-terminal domain protein [Asticcacaulis biprosthecum C19] gi|328841511|gb|EGF91081.1| SNF2 family N-terminal domain protein [Asticcacaulis biprosthecum C19] Length = 1164 Score = 69.6 bits (169), Expect = 2e-10, Method: Composition-based stats. Identities = 25/126 (19%), Positives = 45/126 (35%), Gaps = 20/126 (15%) Query: 82 ARLQKAFPQGRTLDKDPCTIQEWNE--GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWW 139 +R+ P K ++ + ++ P + G GL L N ++ S WW Sbjct: 769 SRIHGGVPGA----KRQDLVEVFQARADCFDVMILSPKAGGVGLTLT-AANHVIHLSRWW 823 Query: 140 DLEEHQQMIERIGVTRQRQAGFKRAVFVY--------YLIAQNTIDELVLQRLRTKSTIQ 191 + Q +R+ + G R V VY +I ++ D + L K + Sbjct: 824 NPAVEDQSTDRV-----YRIGQTRPVQVYLPMAVHPDPVIGPSSFDIKLNDLLSRKRALS 878 Query: 192 DLLLNA 197 +L A Sbjct: 879 RDMLVA 884 >gi|222476088|ref|YP_002564609.1| helicase domain protein [Halorubrum lacusprofundi ATCC 49239] gi|222454459|gb|ACM58723.1| helicase domain protein [Halorubrum lacusprofundi ATCC 49239] Length = 969 Score = 69.6 bits (169), Expect = 2e-10, Method: Composition-based stats. Identities = 30/141 (21%), Positives = 63/141 (44%), Gaps = 18/141 (12%) Query: 59 LEVIIEKANAAPIIVAYHFNSDLARLQKAFPQ-----------GRTLDKDPCTIQE-WNE 106 ++ ++E+ I++ + L + G +D I++ +N Sbjct: 473 IQQLLEEQPNEKILLFTEYRDTLDYILDLVKDEPWADEILVIHGGVDKEDRTRIEDEFNH 532 Query: 107 GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVF 166 G+ LLFA A+ G++LQ+ +I+V + L W+ +Q I R+ + G ++ V Sbjct: 533 GQSRLLFATDAAS-EGIDLQHSCHIMVNYELPWNPNRLEQRIGRL-----HRYGQEKEVT 586 Query: 167 VYYLIAQNTIDELVLQRLRTK 187 V+ ++T + V + L+ K Sbjct: 587 VWNFSFEDTRESKVFEMLQDK 607 >gi|190352249|gb|ACE76520.1| SNF2H-like protein [Sus scrofa] Length = 239 Score = 69.6 bits (169), Expect = 2e-10, Method: Composition-based stats. Identities = 35/196 (17%), Positives = 69/196 (35%), Gaps = 40/196 (20%) Query: 1 MKQY---HKFQRELYCDLQGENIEAFNSASKTVK------CLQL--ANGAVYYDEEKHW- 48 +K Y K QRE Y + ++I+ NSA K K +QL Y + Sbjct: 50 VKIYVGLSKMQREWYTRILMKDIDILNSAGKMDKMRLLNILMQLRKCCNHPYLFDGAEPG 109 Query: 49 --------KEVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQ---------KAFP 89 + K+ L+ ++ K + +++ L L+ Sbjct: 110 PPYTTDMHLVTNSGKMVVLDKLLPKLKEQGSRVLIFSQMTRVLDILEDYCMWRNYEYCRL 169 Query: 90 QGRTL-DKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 G+T D+ +I +NE + + G G+NL ++++ + W+ + Q Sbjct: 170 DGQTPHDERQESINAYNEPNSTKFVFMLSTRAGGLGINL-ATADVVILYDSDWNPQVDLQ 228 Query: 147 MIERIGVTRQRQAGFK 162 ++R + G Sbjct: 229 AMDR-----AHRIGQT 239 >gi|322492113|emb|CBZ27387.1| putative DNA helicase [Leishmania mexicana MHOM/GT/2001/U1103] Length = 1087 Score = 69.6 bits (169), Expect = 2e-10, Method: Composition-based stats. Identities = 32/167 (19%), Positives = 59/167 (35%), Gaps = 27/167 (16%) Query: 51 VHDEKIKALEV----IIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTLD--------- 95 KI A++ I+E+ + +I+ H + L+ A R Sbjct: 451 TARAKIPAVQDYVSGIVEQHLDSGEKLILFAHHQCMMEALRSAVEVVRPRQPIDYIYISG 510 Query: 96 ------KDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIE 149 ++P E + S G G N + +VF L W+ H Q + Sbjct: 511 DTPPAQREPAAEHFRTEATCTVAILSMQSSGIGHNFTC-ASTVVFTELDWNPSTHLQCED 569 Query: 150 RIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 R+ + G + YL+A+ T D ++ L+TK ++ + Sbjct: 570 RV-----HRIGQAHPCHIKYLLAEGTSDSVIWPLLQTKLSVTAAMFE 611 >gi|260814660|ref|XP_002602032.1| hypothetical protein BRAFLDRAFT_82621 [Branchiostoma floridae] gi|229287337|gb|EEN58044.1| hypothetical protein BRAFLDRAFT_82621 [Branchiostoma floridae] Length = 2045 Score = 69.6 bits (169), Expect = 2e-10, Method: Composition-based stats. Identities = 21/184 (11%), Positives = 57/184 (30%), Gaps = 55/184 (29%) Query: 52 HDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKI 109 K+ L+ ++ + +++ L L + Q++ Sbjct: 918 SSGKLFLLDKLLVRLRDTGHRVLIFSQMVRMLDILAEYLTM------RHFPFQDF----- 966 Query: 110 PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKR------ 163 + G G+NL + ++ F W+ + Q +R + G ++ Sbjct: 967 -CFLLSTRAGGLGINL-ATADTVIIFDSDWNPQNDIQA-----QSRAHRIGQRKQVCTST 1019 Query: 164 -----------------------------AVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 V +Y L+ + +++E +++R + K + L+ Sbjct: 1020 PFNKEELSAILKFGAEELFKENEGEEEEMPVNIYRLVTKGSVEEDIIERAKKKMVLDHLV 1079 Query: 195 LNAL 198 + + Sbjct: 1080 IQRM 1083 >gi|257484420|ref|ZP_05638461.1| helicase/SNF2 domain-containing protein [Pseudomonas syringae pv. tabaci ATCC 11528] Length = 54 Score = 69.6 bits (169), Expect = 2e-10, Method: Composition-based stats. Identities = 16/59 (27%), Positives = 28/59 (47%), Gaps = 5/59 (8%) Query: 136 SLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 WW+ Q +R + G + VFVY +IA+ T++E + + R KS + + Sbjct: 1 DPWWNPAAENQATDR-----AYRIGQDKPVFVYKMIARGTVEEKIQRLQREKSALAAGV 54 >gi|291164804|gb|ADD80834.1| helicase [Rhodococcus phage ReqiDocB7] Length = 500 Score = 69.6 bits (169), Expect = 2e-10, Method: Composition-based stats. Identities = 43/222 (19%), Positives = 79/222 (35%), Gaps = 36/222 (16%) Query: 2 KQYHKFQRELYCDLQGENIEAF-NSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIK-AL 59 K Y + EL D + +A N +K ++ Q+ E+ K+ A Sbjct: 264 KLYDQVATELLLDTGSGDPDAIENPMTKFLRLKQICGTTASVREDG---LDKSAKLDLAT 320 Query: 60 EVIIE-KANAAPIIVAYHFNSDL----ARLQKAFPQGRTLDKDPCT-------------- 100 E +E N I+V F S L RL A K Sbjct: 321 EDAVEICENGHKIVVFTQFRSVLHCYIDRLNVALANVPVNGKATQVPVFALHGDVPNDQR 380 Query: 101 ---IQEWNEGKIP-LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 ++EW P ++ G GLN+ + L+ L +QQ ++R+ Sbjct: 381 QGIVKEWAAVDGPAVIVCMTQVAGIGLNMTAARHGQFLDKLFVPL-LNQQAVDRMN---- 435 Query: 157 RQAGF--KRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + G ++V ++ A++T++ V L+ K + + ++ Sbjct: 436 -RIGQSTTQSVQIFDYQARDTVESRVESILKVKKNLFENIVE 476 >gi|28572293|ref|NP_789073.1| helicase regulator [Tropheryma whipplei TW08/27] gi|28410424|emb|CAD66810.1| putative helicase regulator [Tropheryma whipplei TW08/27] Length = 690 Score = 69.6 bits (169), Expect = 2e-10, Method: Composition-based stats. Identities = 24/120 (20%), Positives = 51/120 (42%), Gaps = 12/120 (10%) Query: 92 RTLDKDPCTIQEW-NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 +T + ++ + + + + G G+NLQ N +V L W E Q I+R Sbjct: 558 QTPNDRKNALRTFDEDPDTRVAICSLTAAGLGINLQVASN-VVLSELSWTAAEQGQAIDR 616 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA-----LKKETIHV 205 + + G V + ++ T+D + + +KS L L+ +++E++H+ Sbjct: 617 L-----HRIGQTEPVTAWRILGAGTVDIRMAALVDSKSNDAILSLDGGDMREVQQESLHI 671 >gi|195427783|ref|XP_002061956.1| GK17274 [Drosophila willistoni] gi|194158041|gb|EDW72942.1| GK17274 [Drosophila willistoni] Length = 1274 Score = 69.6 bits (169), Expect = 2e-10, Method: Composition-based stats. Identities = 25/152 (16%), Positives = 56/152 (36%), Gaps = 15/152 (9%) Query: 48 WKEVHDEKIKALEVII----EKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD---PCT 100 + +KI + +I + +++ + + L ++ KA + + Sbjct: 1101 IIGDYSKKITHIVELILKIKNNDDQEKVLIFSQWQAILLQIAKALSDNGIVYRSKCHNQD 1160 Query: 101 IQEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQ 158 I ++ + KI L + GLNL + + + + +Q I RI + Sbjct: 1161 IVDFKDPNLKITCLLMPLSRGSKGLNLIEATH-VFLVEPILNPSDERQAIGRI-----HR 1214 Query: 159 AGFKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 G + V+ I +TI+E +L + + Sbjct: 1215 FGQSKPTTVHRFIVNDTIEENILSLITSDDDS 1246 >gi|55980989|ref|YP_144286.1| hypothetical protein TTHA1020 [Thermus thermophilus HB8] gi|55772402|dbj|BAD70843.1| conserved hypothetical protein [Thermus thermophilus HB8] Length = 1110 Score = 69.6 bits (169), Expect = 2e-10, Method: Composition-based stats. Identities = 32/157 (20%), Positives = 63/157 (40%), Gaps = 23/157 (14%) Query: 53 DEKIKALEVIIEKA----NAAPIIVAYHFNSDLARLQKAFPQ----------GRTLDKDP 98 + K++ L ++E +++ L L + G LD Sbjct: 470 ETKLRKLREVMEDERLQQTGEKLLIFTESRETLEYLVEKLRGWGYSVVSLHGGMDLDARI 529 Query: 99 CTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQ 158 E+ E + + G G+NLQ+ +++V + + W+ +Q + R+ + Sbjct: 530 RAEHEFRERAQ--VMVSTEAGGEGINLQF-CSLMVNYDIPWNPNRLEQRMGRV-----HR 581 Query: 159 AGFKRAVFVYYLIAQNTIDELVLQRLRTK-STIQDLL 194 G + V +Y L+A +T + VL+ L K IQ+ L Sbjct: 582 YGQTKEVHIYNLVALDTREGKVLEALFRKLREIQEAL 618 >gi|120402110|ref|YP_951939.1| helicase domain-containing protein [Mycobacterium vanbaalenii PYR-1] gi|119954928|gb|ABM11933.1| helicase domain protein [Mycobacterium vanbaalenii PYR-1] Length = 964 Score = 69.6 bits (169), Expect = 2e-10, Method: Composition-based stats. Identities = 30/160 (18%), Positives = 56/160 (35%), Gaps = 26/160 (16%) Query: 52 HDEKIKALEVIIEKA-------NAAPIIVAYHFNSDLARLQKAFPQ--GRTLD------- 95 D K AL ++ II+ L L+ + GRT+D Sbjct: 468 ADAKWAALAELLTSEAMFEADRQRRKIIIFSENRDTLDYLEDRLVELLGRTVDVQVIHGA 527 Query: 96 ----KDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERI 151 + + + G G+NLQ +++V + + W+ +Q RI Sbjct: 528 MSWTDRRRAQANFIAEPSSSVLIATDAAGEGVNLQV-AHLMVNYDVPWNPNRLEQRFGRI 586 Query: 152 GVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQ 191 + G + ++ L+A +T + V + L K +Q Sbjct: 587 -----HRIGQRHTCHLWNLVAADTREGDVFRTLLEKVEVQ 621 >gi|325982657|ref|YP_004295059.1| helicase domain-containing protein [Nitrosomonas sp. AL212] gi|325532176|gb|ADZ26897.1| helicase domain protein [Nitrosomonas sp. AL212] Length = 934 Score = 69.6 bits (169), Expect = 2e-10, Method: Composition-based stats. Identities = 28/152 (18%), Positives = 59/152 (38%), Gaps = 22/152 (14%) Query: 45 EKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARL----QKAFPQGRTL------ 94 ++ + DE I ++ + I++ + + + + F + Sbjct: 506 DRKIRSFVDELIDQ---VLNSNSTEKILIFSEYRATQEYIASALRDRFGESSVALIHGSM 562 Query: 95 --DKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIG 152 ++ +I ++ + G G+NLQ +I+V F L W+ Q + R+ Sbjct: 563 SHEERAASIDQFETTGQ--FLVSTEAGGEGINLQRNCHIIVNFDLPWNPMRLVQRVGRL- 619 Query: 153 VTRQRQAGFKRAVFVYYLIAQNTIDELVLQRL 184 + G KR V V+ + A T+D ++Q L Sbjct: 620 ----YRYGQKRKVIVFNMHAPQTLDADIMQML 647 >gi|290984663|ref|XP_002675046.1| helicase [Naegleria gruberi] gi|284088640|gb|EFC42302.1| helicase [Naegleria gruberi] Length = 960 Score = 69.6 bits (169), Expect = 2e-10, Method: Composition-based stats. Identities = 33/183 (18%), Positives = 62/183 (33%), Gaps = 40/183 (21%) Query: 51 VHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAF----------------PQGR 92 H K+ L +IE+ + I+V + L +++ P R Sbjct: 663 DHSPKMLCLIRMIEQCFLSNEKILVFSQYQETLDIIERIINNVNITTGLPLEDEHQPLKR 722 Query: 93 TLDKD---------------PCTIQEWNE-GKIPLLFAHPASCGHGLNLQYGGNILVFFS 136 L ++ + +N PLL G++L +V + Sbjct: 723 KLKRNLDYYRLDESMSVSLGQSVVDSFNSSNDAPLLLISTKVGSLGIDLSTS-QKIVLYD 781 Query: 137 LWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + WD Q + R + G + V +Y + NTI+ + ++L TK++ L Sbjct: 782 VCWDSSWDNQAV-----FRSFRYGQTKPVSIYRFVMYNTIESKIFEKLCTKTSPFKNLSE 836 Query: 197 ALK 199 K Sbjct: 837 DKK 839 >gi|307136203|gb|ADN34041.1| chromatin remodelling complex ATPase chain isw-1 [Cucumis melo subsp. melo] Length = 385 Score = 69.6 bits (169), Expect = 2e-10, Method: Composition-based stats. Identities = 38/194 (19%), Positives = 75/194 (38%), Gaps = 29/194 (14%) Query: 9 RELYCDLQ--GENIEAF-NSASKTVKCLQ--LANGAVYYDEEKHWKEVHDEKIKALEVII 63 R L+C+L+ I+A + +++K Q L N +Y D + KI A+ + Sbjct: 167 RALFCELEVVKGKIKACRSEEVESLKFQQKNLIN-KIYTDS-------AEAKIPAVLNYL 218 Query: 64 EKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGL 123 E V + R+ P + + I + G GL Sbjct: 219 ET-------VIEKKKVNCIRIDGGTPPA---MRQALVSDFQQKDSIMAAVLSIKAGGVGL 268 Query: 124 NLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQR 183 L + ++F L W + Q +R + G +V ++YL+A +T+D+++ Sbjct: 269 TLT-AASTVIFTELSWTPGDLIQAEDR-----AHRIGQVSSVNIHYLLANDTVDDIIWDV 322 Query: 184 LRTKSTIQDLLLNA 197 +++K +L+ Sbjct: 323 VQSKLENLGQMLDG 336 >gi|157692957|ref|YP_001487419.1| SNF2 family helicase [Bacillus pumilus SAFR-032] gi|157681715|gb|ABV62859.1| possible SNF2 family helicase protein [Bacillus pumilus SAFR-032] Length = 556 Score = 69.6 bits (169), Expect = 2e-10, Method: Composition-based stats. Identities = 33/169 (19%), Positives = 70/169 (41%), Gaps = 15/169 (8%) Query: 35 LANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRT- 93 L + A+ EK + + K + +I++ N +I+ + + LQ Q Sbjct: 337 LGSSAIAQIMEKINEVQQNTKALEVVKLIQQLNEK-VIIFTEYRATQIYLQWFLQQNGIS 395 Query: 94 ----LDKDPCTIQEWNEG---KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 ++W + + + + G G+NLQ+ N ++ + L W+ +Q Sbjct: 396 SVPFRGGFKRGKKDWMKDLFRERAQVLIATEAGGEGINLQF-CNQIINYDLPWNPMRLEQ 454 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 I RI + G +R V +Y + T++E +L+ L K + + ++ Sbjct: 455 RIGRI-----HRLGQERDVHIYNMATNGTVEEHILKLLYEKIQLFENVI 498 >gi|281211182|gb|EFA85348.1| SNF2-related domain-containing protein [Polysphondylium pallidum PN500] Length = 1740 Score = 69.6 bits (169), Expect = 3e-10, Method: Composition-based stats. Identities = 30/153 (19%), Positives = 58/153 (37%), Gaps = 16/153 (10%) Query: 46 KHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD-------- 97 W + I L I +K + I+ ++ L + +A + + + Sbjct: 1569 GSWGTKIESVISTLMTINKKKASDKTIIFSQWSDVLEIVSRALNENQIKHERGDKASGIH 1628 Query: 98 -PCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTR 155 I + E I +L +GLN+ +I + + Q I RI Sbjct: 1629 FQDAIARFRKEPAINVLLLPIKKGANGLNIIEATHIFI-VEPLLNPAVEAQAINRI---- 1683 Query: 156 QRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKS 188 + G ++ F++ I +NTI+E V+Q + K+ Sbjct: 1684 -HRFGQEKESFIHRFIIKNTIEEKVVQMSKAKA 1715 >gi|157114821|ref|XP_001652438.1| hypothetical protein AaeL_AAEL006963 [Aedes aegypti] gi|108877144|gb|EAT41369.1| conserved hypothetical protein [Aedes aegypti] Length = 726 Score = 69.6 bits (169), Expect = 3e-10, Method: Composition-based stats. Identities = 24/135 (17%), Positives = 47/135 (34%), Gaps = 17/135 (12%) Query: 67 NAAPIIVAYHFNSDLARLQKAFPQGRT----------LDKDPCTIQEWNEGK-IPLLFAH 115 I+ H L + K + + D ++++ Sbjct: 520 EKQKFIIFAHHIKMLDAISKYLSKQKVDFIRIDGTTRSDLRSSLVEKFQTKDSCRAAVLS 579 Query: 116 PASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNT 175 +C G+ L +++F L W+ Q +R + G + V V YL+A+ T Sbjct: 580 LKACNAGITLT-AAQLVMFAELDWNPSTLAQA-----ESRAHRIGQEGTVIVRYLLAKGT 633 Query: 176 IDELVLQRLRTKSTI 190 D+++ L+ K I Sbjct: 634 ADDIIWTMLQKKQNI 648 >gi|156344365|ref|XP_001621159.1| hypothetical protein NEMVEDRAFT_v1g145813 [Nematostella vectensis] gi|156206838|gb|EDO29059.1| predicted protein [Nematostella vectensis] Length = 223 Score = 69.6 bits (169), Expect = 3e-10, Method: Composition-based stats. Identities = 26/135 (19%), Positives = 53/135 (39%), Gaps = 16/135 (11%) Query: 44 EEKHWKEVHDEKIKALEVII---EKANAAPIIVAYHFNSDLARLQKAFPQGR-------- 92 + K+ + K++ L+ I+ + + +++ ++ L +K Q R Sbjct: 89 DLKNVQPELSGKMQVLDYILAVTKATSDDKVVLVSNYTQTLDLFEKLCRQRRYQHVRLDG 148 Query: 93 --TLDKDPCTIQEWNEGK--IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMI 148 ++ K + +N+ K + + G GLNL G N LV F W+ Q + Sbjct: 149 SMSIKKRQKIVDRFNDPKGGDFIFMLSSKAGGCGLNL-IGANRLVMFDPDWNPANDDQAM 207 Query: 149 ERIGVTRQRQAGFKR 163 R+ Q++ R Sbjct: 208 ARVWRDGQKKKASYR 222 >gi|326670855|ref|XP_003199305.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1-like [Danio rerio] Length = 668 Score = 69.6 bits (169), Expect = 3e-10, Method: Composition-based stats. Identities = 27/159 (16%), Positives = 58/159 (36%), Gaps = 20/159 (12%) Query: 50 EVHDEKIKALEVIIEKA---NAAPIIVAYHFNSDLARLQKAF---------PQGRTLDKD 97 + KI+A+ I +V H L + K G T + Sbjct: 469 HTAEAKIRAIMEYISDMLECGREKFLVFAHHKLVLDSITKELGEKSISFIRIDGSTPSAE 528 Query: 98 PCTI-QEWNEGKIP-LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTR 155 + + + + + + GL L + ++VF L+W+ Q +R+ Sbjct: 529 RQLLCERFQASQQSCVAVLSITAANMGLTL-HSAALVVFAELFWNPGVLIQAEDRV---- 583 Query: 156 QRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 + G V ++YL+A+ T D+ + ++ K + + + Sbjct: 584 -HRIGQTSNVDIHYLVAKGTADDYLWPMIQAKMNVLEQV 621 >gi|322501559|emb|CBZ36638.1| unnamed protein product [Leishmania donovani BPK282A1] Length = 908 Score = 69.6 bits (169), Expect = 3e-10, Method: Composition-based stats. Identities = 20/88 (22%), Positives = 39/88 (44%), Gaps = 7/88 (7%) Query: 109 IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVY 168 + L + G GLNL G + ++ ++ Q ++R + G + V VY Sbjct: 742 VFLFLISTRAGGTGLNLT-GADTVILLDGDFNPHNDLQAVDRC-----HRIGQRNPVAVY 795 Query: 169 YLIAQNTI-DELVLQRLRTKSTIQDLLL 195 L++ +T+ DE + K ++ L+L Sbjct: 796 RLVSPHTVEDERHSGIVDRKLKLEHLVL 823 >gi|330870035|gb|EGH04744.1| SNF2-related:helicase [Pseudomonas syringae pv. aesculi str. 0893_23] Length = 193 Score = 69.6 bits (169), Expect = 3e-10, Method: Composition-based stats. Identities = 28/154 (18%), Positives = 58/154 (37%), Gaps = 18/154 (11%) Query: 55 KIKALEVIIEKAN-AAPIIVAYHFNSDLARLQKA----------FPQGRTLDKDPCTIQE 103 K++ + ++ + + +I+ + +A L++ + K I Sbjct: 29 KVRIVADLMAELDVDDKVILFCEYQESVASLREHCLAMGVGCVTLVGSDSPKKRQKAIDA 88 Query: 104 WNEG-KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFK 162 + + + ++ G G NL N + F L W Q +R + G Sbjct: 89 FQQDQDCRVFIGTRSAAGTGYNLT-AANYVFFLGLPWTPGLQDQAEDR-----AYRNGQL 142 Query: 163 RAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 R V V +A++TID+ + Q L K + L++ Sbjct: 143 RMVVVKIPLAEDTIDQQLWQMLMDKRALASDLID 176 >gi|46138107|ref|XP_390744.1| hypothetical protein FG10568.1 [Gibberella zeae PH-1] Length = 786 Score = 69.6 bits (169), Expect = 3e-10, Method: Composition-based stats. Identities = 27/166 (16%), Positives = 58/166 (34%), Gaps = 26/166 (15%) Query: 34 QLANGAVYYDEEKHWKEVHDEKIKALEV---IIEKANAAPIIVAYHFNSDLARLQKAFPQ 90 QL++ +E K++++ + K+ +V ++ + L LQ Sbjct: 625 QLSS----LEEPARIHLGLSTKLQSVADNICLRSKSTDRVSLVFSYWTTTLNLLQTMLED 680 Query: 91 GRTL----------DKDPCTIQEW-NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWW 139 + + + E+ N+ I +L + GL L + + W Sbjct: 681 RGIVLRRIDGSLGNGERLRVLNEFKNDPAISVLLITMQTGAVGLTLTVATQVHI-IEPQW 739 Query: 140 DLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLR 185 + +Q I R + G V V+ I +NT++E ++ Sbjct: 740 NPSVEEQAIAR-----ALRMGQSNIVKVFRYIMKNTVEE--MEAQE 778 >gi|116326115|ref|YP_803440.1| global transactivator-like protein [Anticarsia gemmatalis nucleopolyhedrovirus] gi|112180853|gb|ABI13830.1| global transactivator-like protein [Anticarsia gemmatalis nucleopolyhedrovirus] Length = 498 Score = 69.6 bits (169), Expect = 3e-10, Method: Composition-based stats. Identities = 31/195 (15%), Positives = 69/195 (35%), Gaps = 33/195 (16%) Query: 28 KTVKCLQLANGAVYYD------------EEKHWKEVHDEKIKALEVIIEKANAAPIIVAY 75 + Q+ E ++ ++ ++ +++ N ++V Sbjct: 296 LLCRLRQMCCHPALTKCAHMFADQAIIFEPQYVSSKCRRVLEIVQQVLDTPNDKVVLV-S 354 Query: 76 HFNSDLARLQKAFPQ---------GRTLDKDPCTIQ-EWNEGKIP--LLFAHPASCGHGL 123 + L + K Q G+ ++ ++ ++N P +L G GL Sbjct: 355 QWVEFLYIVAKLLQQRGIPILLYTGQLRVEERTAVENQFNAADSPYRVLLMSINCGGVGL 414 Query: 124 NLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIA--QNTIDELVL 181 NL G N ++ W+ + Q RI + G K+ +VY ++ N+I+ + Sbjct: 415 NLTGG-NHIIMLEPHWNPQIELQAQSRI-----HRMGQKKQTYVYKMLNDEDNSIERYMK 468 Query: 182 QRLRTKSTIQDLLLN 196 R K T + + + Sbjct: 469 MRQDNKLTFVNKVFD 483 >gi|302769926|ref|XP_002968382.1| hypothetical protein SELMODRAFT_60240 [Selaginella moellendorffii] gi|300164026|gb|EFJ30636.1| hypothetical protein SELMODRAFT_60240 [Selaginella moellendorffii] Length = 1107 Score = 69.6 bits (169), Expect = 3e-10, Method: Composition-based stats. Identities = 31/169 (18%), Positives = 59/169 (34%), Gaps = 28/169 (16%) Query: 26 ASKTVKCLQL--ANGAVYYDEEKHWKEVHDE------KIKALEVIIEKAN--AAPIIVAY 75 A KC++L Y + H + ++ K+ L+ I+ K +++ Sbjct: 315 APLQNKCMELRKVCNHPYLNYPPHCRLFNENMVRMCGKLWILDRILIKLQRSGHRVLLFS 374 Query: 76 HFNSDLARLQ----------KAFPQGRTLDKDPCTIQEWNEG--KIPLLFAHPASCGHGL 123 L L+ + LD I ++N + + + G GL Sbjct: 375 TMTKLLDILEDYLQWRGLIYRRIDGTTPLDSRETAIVDFNAPGSQCFIFLLSIRAAGRGL 434 Query: 124 NLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIA 172 NLQ + +V + + + +Q + R + G K V V Y+ A Sbjct: 435 NLQT-ADTVVIYDPDPNPKNEEQAVAR-----AHRIGQKSEVKVIYMEA 477 >gi|295706576|ref|YP_003599651.1| ATP-dependent RNA helicase [Bacillus megaterium DSM 319] gi|294804235|gb|ADF41301.1| ATP-dependent RNA helicase [Bacillus megaterium DSM 319] Length = 557 Score = 69.6 bits (169), Expect = 3e-10, Method: Composition-based stats. Identities = 30/152 (19%), Positives = 66/152 (43%), Gaps = 17/152 (11%) Query: 53 DEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQ---------GRTLDKDPCTIQE 103 + K + + +++K + +I+ + + LQ Q G +++ Sbjct: 358 NAKAEKVLELVQKIDDK-VIIFTEYRATQLYLQWYLKQHGITSVPFRGGFKRGKKDWMKQ 416 Query: 104 WNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKR 163 E + A + G G+NLQ+ + ++ + L W+ +Q I R+ + G K Sbjct: 417 LFESHAQVFIA-TEAGGEGINLQF-CHHIINYDLPWNPMRLEQRIGRV-----HRLGQKH 469 Query: 164 AVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 V +Y L Q+T++E +L+ L K + + ++ Sbjct: 470 DVHIYNLAIQHTVEEHILKLLYEKINLFERVV 501 >gi|71654268|ref|XP_815757.1| helicase-like protein [Trypanosoma cruzi strain CL Brener] gi|70880835|gb|EAN93906.1| helicase-like protein, putative [Trypanosoma cruzi] Length = 1053 Score = 69.6 bits (169), Expect = 3e-10, Method: Composition-based stats. Identities = 21/111 (18%), Positives = 48/111 (43%), Gaps = 9/111 (8%) Query: 96 KDPCTIQEWNEGK-IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 + T++ +N + +L + G G+N+ +++ S +R + Sbjct: 690 ERENTLRSFNSSRGADVLLLSMKAGGVGINITSATRVILADS------GFNPADDRQAIG 743 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN--ALKKETI 203 R + G R VFVY L+ T++ + Q+ K + ++ +LK++ + Sbjct: 744 RAYRYGQTRPVFVYRLVCYQTLEHRMFQQKVAKEWLFHTIVEEASLKRDAL 794 >gi|15229135|ref|NP_189853.1| CHR38 (CHROMATIN REMODELING 38); ATP binding / DNA binding / helicase/ nucleic acid binding [Arabidopsis thaliana] gi|7523392|emb|CAB86450.1| putative protein [Arabidopsis thaliana] Length = 1256 Score = 69.6 bits (169), Expect = 3e-10, Method: Composition-based stats. Identities = 28/168 (16%), Positives = 68/168 (40%), Gaps = 23/168 (13%) Query: 46 KHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAF------PQGRTLDKDPC 99 KH + + + L ++ I++ H + + + F +GR L Sbjct: 1050 KHDAKKGSKVMFVLNLVFRVVKREKILIFCHNIAPIRLFLELFENVFRWKRGRELLTLTG 1109 Query: 100 TIQEWNEGKI-----------PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMI 148 ++ + G++ +L A +C G++L + ++ W+ + +Q I Sbjct: 1110 DLELFERGRVIDKFEEPGGQSRVLLASITACAEGISLT-AASRVIMLDSEWNPSKTKQAI 1168 Query: 149 ERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 R + G ++ V+VY L+++ T++E +R K + ++ + Sbjct: 1169 AR-----AFRPGQQKVVYVYQLLSRGTLEEDKYRRTTWKEWVSSMIFS 1211 >gi|328858862|gb|EGG07973.1| hypothetical protein MELLADRAFT_85301 [Melampsora larici-populina 98AG31] Length = 150 Score = 69.2 bits (168), Expect = 3e-10, Method: Composition-based stats. Identities = 12/100 (12%), Positives = 44/100 (44%), Gaps = 6/100 (6%) Query: 96 KDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTR 155 + + + ++ + G GL++ + + W+ + QQ ++R+ Sbjct: 23 RTFQLKKFNQDPEVDAFVVSIEAGGVGLDMTCADEVYIM-DAHWNPQIVQQAVDRVQ--- 78 Query: 156 QRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 + G V V++++ Q+++++ + + K+++ ++ Sbjct: 79 --RMGQTHPVNVFHVVVQDSVEQHLFNVQKKKASLASKVI 116 >gi|145295759|ref|YP_001138580.1| hypothetical protein cgR_1685 [Corynebacterium glutamicum R] gi|140845679|dbj|BAF54678.1| hypothetical protein [Corynebacterium glutamicum R] Length = 892 Score = 69.2 bits (168), Expect = 3e-10, Method: Composition-based stats. Identities = 27/136 (19%), Positives = 50/136 (36%), Gaps = 17/136 (12%) Query: 67 NAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKI----------PLLFAHP 116 + ++ +F L L+K + R + + + + L A Sbjct: 714 HGRKALIFTYFLDVLDELEKHLGE-RVIGRISGDVPATKRQLLVDALSHSKPGSALIAQI 772 Query: 117 ASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTI 176 + G GLN+Q ++ + QQ + R+ + G V V+ LI T Sbjct: 773 TAGGVGLNIQ-SASLCIICEPQVKPTIEQQAVARV-----HRMGQTATVQVHRLIGDETA 826 Query: 177 DELVLQRLRTKSTIQD 192 DE +L+ L K+ + D Sbjct: 827 DERMLEILAGKTHVFD 842 >gi|195377036|ref|XP_002047298.1| GJ13361 [Drosophila virilis] gi|194154456|gb|EDW69640.1| GJ13361 [Drosophila virilis] Length = 1282 Score = 69.2 bits (168), Expect = 3e-10, Method: Composition-based stats. Identities = 28/174 (16%), Positives = 60/174 (34%), Gaps = 25/174 (14%) Query: 45 EKHWKEVHDEKIKALEVII-----EKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDP- 98 KI + ++ + + I++ + + L + A Q + Sbjct: 1106 SSKVIGDFSTKIAYIVELVLKIKSQSKDKEKILIFSQWATILNHIASALSQNGIEYRSKF 1165 Query: 99 --CTIQEWNEGKIPL--LFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 I E+ + + + L A GLNL + + E Q I R+ Sbjct: 1166 TTRDIDEFKDPERNVTCLLMPLARGAKGLNLIEATH-VFLVEPILTPGEELQAIGRV--- 1221 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKS---------TIQDLLLNALK 199 + G + V+ I TI+E +L+ +++ + ++ L++LK Sbjct: 1222 --HRFGQTKPTTVHRFIVNGTIEENILKLIKSADDKSTLSTHWDLDNMTLDSLK 1273 >gi|307170865|gb|EFN62976.1| Transcription termination factor 2 [Camponotus floridanus] Length = 966 Score = 69.2 bits (168), Expect = 3e-10, Method: Composition-based stats. Identities = 35/171 (20%), Positives = 62/171 (36%), Gaps = 18/171 (10%) Query: 44 EEKHWKEVHDEKIKALEVIIEKANAAPIIV----------AYHFNSDLARLQKAFPQGRT 93 ++ + +E I++ + IIV A H S F Sbjct: 787 DDDRISSKMRIMLNMVEKILQNSEDKLIIVSQWTTLLNVIASHLPSIKDATFSKFTGNVA 846 Query: 94 LDKDPCTIQEWNEGKI--PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERI 151 + + +N K +L + G GGN L+ F + W+ + Q +RI Sbjct: 847 IKDRQNVVNSFNSQKSGPRILLLSL-TAGGVGLNLVGGNHLLLFDIHWNPQLETQAQDRI 905 Query: 152 GVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKET 202 + G K+ V++Y I +TI+E V K I +L+ + +T Sbjct: 906 -----YRFGQKKNVYIYKFICVDTIEERVKALQEQKLEIARNVLSGDRNDT 951 >gi|284046270|ref|YP_003396610.1| helicase [Conexibacter woesei DSM 14684] gi|283950491|gb|ADB53235.1| helicase domain protein [Conexibacter woesei DSM 14684] Length = 726 Score = 69.2 bits (168), Expect = 3e-10, Method: Composition-based stats. Identities = 43/216 (19%), Positives = 77/216 (35%), Gaps = 30/216 (13%) Query: 2 KQYHKFQRELY-----CDLQGENIEAFNSASKTVK-CLQLANGAVYYDEEKHWKEVHDEK 55 ++Y +R++ L + A +A+ K QL GA+ + K Sbjct: 496 REYRLAERDVIRWLREQPLDLSELRAKIAATLRAKRLAQL--GALQ-------RIAARGK 546 Query: 56 IKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTL------DKDPCTIQEWNEG 107 + A I A+ P++V + + F L T++ + + Sbjct: 547 LHAALAWIHDFLASGEPLVVFARHVEVQDAVLERFADAAHLLGRDGATAREATVRAFQQP 606 Query: 108 KIP-LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVF 166 P L+ A G+ L N + F L W H Q +R + G AV Sbjct: 607 DGPQLIVAATQVAAQGITLTRASN-VAFLELEWTPAMHDQAEDRC-----HRIGQHDAVT 660 Query: 167 VYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKET 202 +YL+A TIDE + ++ K I + + + + Sbjct: 661 AWYLLAARTIDETMAHLIQRKRGIVAAVTDGRRLDG 696 >gi|24581780|ref|NP_608883.1| Marcal1 [Drosophila melanogaster] gi|75027220|sp|Q9VMX6|SMAL1_DROME RecName: Full=SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1 gi|22945611|gb|AAF52182.2| Marcal1 [Drosophila melanogaster] gi|39752623|gb|AAR30193.1| RE44811p [Drosophila melanogaster] gi|220948472|gb|ACL86779.1| Marcal1-PA [synthetic construct] Length = 755 Score = 69.2 bits (168), Expect = 3e-10, Method: Composition-based stats. Identities = 27/143 (18%), Positives = 53/143 (37%), Gaps = 19/143 (13%) Query: 59 LEVIIEKANAAPIIVAYHFNSDLARLQKAF---------PQGRTL-DKDPCTIQEWNEGK 108 L+ ++++ I+ H + + G+T D ++ + + Sbjct: 528 LKTLVKEQ--KKFIIFAHHRVMMDAISDFLSGLKVHYIRIDGQTRSDHRSDSVDTFQKKS 585 Query: 109 -IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFV 167 + +C G+ L I+VF L W+ Q +R + G + V Sbjct: 586 SCKVALLSLKACNSGITLT-AAEIIVFAELDWNPSTLAQA-----ESRAHRIGQTKPVIC 639 Query: 168 YYLIAQNTIDELVLQRLRTKSTI 190 YLIA NT D+++ L+ K + Sbjct: 640 RYLIAHNTADDIIWNMLKNKQEV 662 >gi|297818740|ref|XP_002877253.1| hypothetical protein ARALYDRAFT_484766 [Arabidopsis lyrata subsp. lyrata] gi|297323091|gb|EFH53512.1| hypothetical protein ARALYDRAFT_484766 [Arabidopsis lyrata subsp. lyrata] Length = 1254 Score = 69.2 bits (168), Expect = 3e-10, Method: Composition-based stats. Identities = 24/111 (21%), Positives = 52/111 (46%), Gaps = 11/111 (9%) Query: 86 KAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQ 145 + F +GR +DK G+ +L A +C G++L + ++ W+ + + Sbjct: 1110 ELFERGRVIDKFEEP-----GGQSRVLLASITACAEGISLT-AASRVIMLDSEWNPSKTK 1163 Query: 146 QMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 Q I R + G ++ V+VY L+++ T++E +R K + ++ + Sbjct: 1164 QAIAR-----AFRPGQQKVVYVYQLLSRGTLEEDKYRRTTWKEWVSSMIFS 1209 >gi|238493629|ref|XP_002378051.1| SNF2 family helicase, putative [Aspergillus flavus NRRL3357] gi|220696545|gb|EED52887.1| SNF2 family helicase, putative [Aspergillus flavus NRRL3357] Length = 2055 Score = 69.2 bits (168), Expect = 3e-10, Method: Composition-based stats. Identities = 38/209 (18%), Positives = 78/209 (37%), Gaps = 30/209 (14%) Query: 6 KFQRELYCDLQGENIEAFNSASKTVKCLQ------------LANGAVYYDEEKHWKEVHD 53 + + E +++ +N++A + +C + + DE + Sbjct: 1814 EMRDET--EVKEDNVDASEETVQKEECNVEGCRGSGKKFNVMDASTLKCDERDRSAKYGG 1871 Query: 54 EKIKALEVIIEKA-NAAPIIVAYHFNSDLARLQKAFPQGRTL--------DKDPCTIQEW 104 K+ + II+ I++ F + KA + + +Q + Sbjct: 1872 SKLDKMIEIIQAVPTGDRILLFIQFPELIDVASKALELAKIKYIAIIATDRRAAQKVQHF 1931 Query: 105 NE----GKIPLLFAHPAS-CGHGLNLQYGGNILVFFSLWWDLEEHQ-QMIERIGVTRQRQ 158 E G+ +L + S GLNLQ N ++F S + ++ + R R+ Sbjct: 1932 QEAGGFGENKVLILNLGSEMAAGLNLQC-ANHVIFLSPMFAQTQYDYDSSMTQAIGRARR 1990 Query: 159 AGFKRAVFVYYLIAQNTIDELVLQRLRTK 187 G + V++Y+L+A+ TID + Q K Sbjct: 1991 YGQTKHVYIYHLLARMTIDTTLFQERHGK 2019 >gi|317157659|ref|XP_001826363.2| C-5 cytosine-specific DNA methylase [Aspergillus oryzae RIB40] Length = 2165 Score = 69.2 bits (168), Expect = 3e-10, Method: Composition-based stats. Identities = 34/168 (20%), Positives = 64/168 (38%), Gaps = 16/168 (9%) Query: 35 LANGAVYYDEEKHWKEVHDEKIKALEVIIEKA-NAAPIIVAYHFNSDLARLQKAFPQGRT 93 + + DE + K+ + II+ I++ F + KA + Sbjct: 1963 MDASTLKCDERDRSAKYGGSKLDKMIEIIQAVPTGDRILLFIQFPELIDVTSKALELAKI 2022 Query: 94 L--------DKDPCTIQEWNE----GKIPLLFAHPAS-CGHGLNLQYGGNILVFFSLWWD 140 + +Q + E G+ +L + S GLNLQ N ++F S + Sbjct: 2023 KYIAIIATDRRAAQKVQHFQEAGGFGENKVLILNLGSEMAAGLNLQC-ANHVIFLSPMFA 2081 Query: 141 LEEHQ-QMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTK 187 ++ + R R+ G + V++Y+L+A+ TID + Q K Sbjct: 2082 QTQYDYDSSMTQAIGRARRYGQTKHVYIYHLLARMTIDTTLFQERHGK 2129 >gi|3420753|gb|AAC31920.1| helicase domain-containing protein [Dictyostelium discoideum] Length = 344 Score = 69.2 bits (168), Expect = 3e-10, Method: Composition-based stats. Identities = 23/102 (22%), Positives = 42/102 (41%), Gaps = 6/102 (5%) Query: 95 DKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 +++ N+ + + G GL L ++F L W Q +R Sbjct: 12 NRNDYVNDFQNDPNCRVAVLSITAAGTGLTLT-AATCVIFAELSWTPGVLFQAEDR---- 66 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + G +V V YLIA T+DE++ + +K T+ +L+ Sbjct: 67 -AHRYGQTSSVLVQYLIALGTVDEMIWSLVESKKTLLGRVLD 107 >gi|224107415|ref|XP_002314473.1| hypothetical protein POPTRDRAFT_229741 [Populus trichocarpa] gi|222863513|gb|EEF00644.1| hypothetical protein POPTRDRAFT_229741 [Populus trichocarpa] Length = 127 Score = 69.2 bits (168), Expect = 3e-10, Method: Composition-based stats. Identities = 27/130 (20%), Positives = 49/130 (37%), Gaps = 20/130 (15%) Query: 55 KIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKA--FPQGRTLDKDPCT--------IQ 102 K++ L+ ++ K A ++ L +++ + Q R L D T I Sbjct: 2 KLEMLDRLLPKLKATDHRVLFFSTMTRLLDVMEEYLTWKQYRYLRLDGHTSGGDRGSLID 61 Query: 103 EWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 +N+ P + + G G+NLQ + ++ F W+ + Q R + G Sbjct: 62 RFNQQDSPYFIFLLSIRAGGVGVNLQ-AADTVIIFDTDWNPQVDLQAQAR-----AHRIG 115 Query: 161 FKRAVFVYYL 170 KR V V Sbjct: 116 QKRDVLVLRF 125 >gi|294501229|ref|YP_003564929.1| ATP-dependent RNA helicase [Bacillus megaterium QM B1551] gi|294351166|gb|ADE71495.1| ATP-dependent RNA helicase [Bacillus megaterium QM B1551] Length = 557 Score = 69.2 bits (168), Expect = 3e-10, Method: Composition-based stats. Identities = 30/152 (19%), Positives = 66/152 (43%), Gaps = 17/152 (11%) Query: 53 DEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQ---------GRTLDKDPCTIQE 103 + K + + +++K + +I+ + + LQ Q G +++ Sbjct: 358 NAKAEKVLELVQKIDDK-VIIFTEYRATQLYLQWYLKQHGITSVPFRGGFKRGKKDWMKQ 416 Query: 104 WNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKR 163 E + A + G G+NLQ+ + ++ + L W+ +Q I R+ + G K Sbjct: 417 LFESHAQVFIA-TEAGGEGINLQF-CHHIINYDLPWNPMRLEQRIGRV-----HRLGQKH 469 Query: 164 AVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 V +Y L Q+T++E +L+ L K + + ++ Sbjct: 470 DVHIYNLAIQHTVEEHILKLLYEKINLFERVV 501 >gi|94263334|ref|ZP_01287149.1| SNF2-related:Helicase-like [delta proteobacterium MLMS-1] gi|93456289|gb|EAT06419.1| SNF2-related:Helicase-like [delta proteobacterium MLMS-1] Length = 952 Score = 69.2 bits (168), Expect = 3e-10, Method: Composition-based stats. Identities = 26/171 (15%), Positives = 61/171 (35%), Gaps = 30/171 (17%) Query: 49 KEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARL------QKAFPQGRTL------ 94 +++A+ ++++ A ++V F L + P+ Sbjct: 768 IVYSSARLRAMINVMDELFAKNEKLLVFVEFLDLQESLIPYLQQRYLLPKPPLRISGKVS 827 Query: 95 -DKDPCTIQEWNEGK---IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 K + + + + ++ P + G GL L N ++ + WW+ Q +R Sbjct: 828 GAKRKSLVDSFQQSRSNLFDVMLLSPKAGGVGLTLT-AANNVIHLTRWWNPAVEDQCTDR 886 Query: 151 IGVTRQRQAGFKRAVFVYYLIA------QNTIDELVLQRLRTKSTIQDLLL 195 + + G + V VY +A +++ D+ + L K + +L Sbjct: 887 V-----YRIGQNKPVNVYLPLAIHPRFNEHSFDQNLHLLLERKRKLSRSVL 932 >gi|302758372|ref|XP_002962609.1| hypothetical protein SELMODRAFT_404507 [Selaginella moellendorffii] gi|300169470|gb|EFJ36072.1| hypothetical protein SELMODRAFT_404507 [Selaginella moellendorffii] Length = 760 Score = 69.2 bits (168), Expect = 3e-10, Method: Composition-based stats. Identities = 22/121 (18%), Positives = 47/121 (38%), Gaps = 6/121 (4%) Query: 70 PIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGG 129 I V + L L+ A + + +I E+ + I ++ +GLNL Sbjct: 319 KIFVFSTWQEVLDLLEHALKSTSSAGQMGSSILEFKKENIQVMLLPIQHGANGLNLIEAQ 378 Query: 130 NILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKST 189 + ++ + Q I R+ + G + V+ I NT++E + + + K+ Sbjct: 379 H-VILVEPLLNPAVEAQAINRV-----HRIGQRLKTLVHRFIICNTVEENIYKMSQQKTN 432 Query: 190 I 190 + Sbjct: 433 L 433 >gi|75214627|gb|ABA18099.1| SNF2 domain-containing protein [Olimarabidopsis pumila] Length = 1256 Score = 69.2 bits (168), Expect = 3e-10, Method: Composition-based stats. Identities = 28/168 (16%), Positives = 68/168 (40%), Gaps = 23/168 (13%) Query: 46 KHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAF------PQGRTLDKDPC 99 KH + + + L ++ I++ H + + + F +GR L Sbjct: 1050 KHDAKKGSKVMFVLNLVFRVVKREKILIFCHNIAPIRLFLELFENVFRWKRGRELLTLTG 1109 Query: 100 TIQEWNEGKI-----------PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMI 148 ++ + G++ +L A +C G++L + ++ W+ + +Q I Sbjct: 1110 DLELFERGRVIDKFEEPGGQSRVLLASITACAEGISLT-AASRVIMLDSEWNPSKTKQAI 1168 Query: 149 ERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 R + G ++ V+VY L+++ T++E +R K + ++ + Sbjct: 1169 AR-----AFRPGQQKVVYVYQLLSRGTLEEDKYRRTTWKEWVSSMIFS 1211 >gi|145356928|ref|XP_001422675.1| predicted protein [Ostreococcus lucimarinus CCE9901] gi|144582918|gb|ABP00992.1| predicted protein [Ostreococcus lucimarinus CCE9901] Length = 638 Score = 69.2 bits (168), Expect = 4e-10, Method: Composition-based stats. Identities = 29/150 (19%), Positives = 60/150 (40%), Gaps = 18/150 (12%) Query: 59 LEVIIEKANAAPIIVAYHFNSDLARLQKAF--PQGRTL---DKDPCTIQ------EWNEG 107 LE +I+ + + + H L + + + +T+ P ++ Sbjct: 439 LETLIDGST-SKFLFFAHHGVLLDAVAQCMDAKKVKTIRIDGSTPAAVRGDLVNAFQRRD 497 Query: 108 KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFV 167 + + + G GL L + ++F + W + Q +R + G + +V V Sbjct: 498 DVRVAILSIKAAGMGLTLT-AASTVIFGEMVWTPGDLIQAEDR-----AHRIGQQSSVLV 551 Query: 168 YYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 YL A++TIDE++ Q ++ K +LN Sbjct: 552 QYLHAKDTIDEIIWQSIKKKLDNLGAVLNG 581 >gi|315446141|ref|YP_004079020.1| DNA/RNA helicase, superfamily II, SNF2 family [Mycobacterium sp. Spyr1] gi|315264444|gb|ADU01186.1| DNA/RNA helicase, superfamily II, SNF2 family [Mycobacterium sp. Spyr1] Length = 965 Score = 69.2 bits (168), Expect = 4e-10, Method: Composition-based stats. Identities = 36/197 (18%), Positives = 70/197 (35%), Gaps = 29/197 (14%) Query: 18 ENIEAFNSASKTVKCLQ---LANGAVYYDEEKHWKEVHDEKIKALEVIIEK-------AN 67 + + + + ++TV L+ L G + E + D K AL ++ Sbjct: 431 DEVVSVATNARTVAELEAEILVLGRLVAKAEAVYSARADAKWAALAELLTSEAMFEADGQ 490 Query: 68 AAPIIVAYHFNSDLARLQKAFPQ--GRTLD-----------KDPCTIQEWNEGKIPLLFA 114 II+ L L+ GRT+D + + Sbjct: 491 RRKIIIFSENRDTLDYLEDRLVGLLGRTVDVQVIHGALSWTDRRRAQANFITEPSSSVLI 550 Query: 115 HPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQN 174 + G G+NLQ +++V + + W+ +Q RI + G + ++ L+A + Sbjct: 551 ATDAAGEGVNLQV-AHLMVNYDVPWNPNRLEQRFGRI-----HRIGQRHTCHLWNLVAAD 604 Query: 175 TIDELVLQRLRTKSTIQ 191 T + V + L K +Q Sbjct: 605 TREGDVFRTLLEKVEVQ 621 >gi|302896542|ref|XP_003047151.1| hypothetical protein NECHADRAFT_46398 [Nectria haematococca mpVI 77-13-4] gi|256728079|gb|EEU41438.1| hypothetical protein NECHADRAFT_46398 [Nectria haematococca mpVI 77-13-4] Length = 971 Score = 69.2 bits (168), Expect = 4e-10, Method: Composition-based stats. Identities = 22/100 (22%), Positives = 41/100 (41%), Gaps = 6/100 (6%) Query: 91 GRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 KD + N + + A G L+L N ++ LW++ QQ +R Sbjct: 825 ANAKQKDKALREFRNNPEQTIFLASMKCGGQALDLPV-ANRVIIVDLWYNKTVEQQAFKR 883 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 + + G K+ + ++A+ +IDE + + K TI Sbjct: 884 V-----HRIGQKKETHLVRILARGSIDERLYKLQNAKETI 918 >gi|308806345|ref|XP_003080484.1| transcription regulatory protein SNF2, putative (ISS) [Ostreococcus tauri] gi|116058944|emb|CAL54651.1| transcription regulatory protein SNF2, putative (ISS) [Ostreococcus tauri] Length = 1192 Score = 69.2 bits (168), Expect = 4e-10, Method: Composition-based stats. Identities = 27/117 (23%), Positives = 44/117 (37%), Gaps = 12/117 (10%) Query: 76 HFNSDLARLQKAFPQGRT-LDKDPCTIQEWNE--GKIPLLFAHPASCGHGLNLQYGGNIL 132 D A L+ G T L++ I E+N + + G GLNLQ + + Sbjct: 815 WTTPDGADLKYCRIDGTTSLEQREVAINEFNAQHSDKFIFLLSIRAAGRGLNLQT-ADTV 873 Query: 133 VFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKST 189 V + + + +Q I R + G KR V V + A +D+ + K Sbjct: 874 VVYDPDPNPKNEEQAIAR-----AHRIGQKREVRVIHFEA---VDDAPNETQSPKDA 922 >gi|322826005|gb|EFZ30802.1| helicase-like protein, putative [Trypanosoma cruzi] Length = 1090 Score = 69.2 bits (168), Expect = 4e-10, Method: Composition-based stats. Identities = 21/111 (18%), Positives = 47/111 (42%), Gaps = 9/111 (8%) Query: 96 KDPCTIQEWNE-GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 + T++ +N +L + G G+N+ +++ S +R + Sbjct: 726 ERENTLRSFNSLRGADVLLLSMKAGGVGINITSATRVILADS------GFNPADDRQAIG 779 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN--ALKKETI 203 R + G R VFVY L+ T++ + Q+ K + ++ +LK++ + Sbjct: 780 RAYRYGQTRPVFVYRLVCYQTLEHRMFQQKVAKEWLFHTIVEEASLKRDAL 830 >gi|322499377|emb|CBZ34450.1| unnamed protein product [Leishmania donovani BPK282A1] Length = 1102 Score = 68.8 bits (167), Expect = 4e-10, Method: Composition-based stats. Identities = 32/167 (19%), Positives = 60/167 (35%), Gaps = 27/167 (16%) Query: 51 VHDEKIKALEV----IIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTLD--------- 95 KI A++ I+E+ + +I+ H + L+ A R Sbjct: 459 TARAKIPAVQDYVSGIVEQHLDSGEKLILFAHHQCMMEALRSAVEAVRPRQPIDYIYISG 518 Query: 96 ------KDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIE 149 ++P E + S G G N + +VF L W+ H Q + Sbjct: 519 DTPPAQREPAAEHFRTEATCTVAILSMQSSGIGHNFTC-ASTVVFTELDWNPSTHLQCED 577 Query: 150 RIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 R+ + G + + YL+A+ T D ++ L+TK ++ + Sbjct: 578 RV-----HRIGQAQPCHIKYLLAEGTSDSVIWPLLQTKLSVTAAMFE 619 >gi|321399531|emb|CAM68321.2| putative DNA helicase [Leishmania infantum JPCM5] Length = 1102 Score = 68.8 bits (167), Expect = 4e-10, Method: Composition-based stats. Identities = 32/167 (19%), Positives = 60/167 (35%), Gaps = 27/167 (16%) Query: 51 VHDEKIKALEV----IIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTLD--------- 95 KI A++ I+E+ + +I+ H + L+ A R Sbjct: 459 TARAKIPAVQDYVSGIVEQHLDSGEKLILFAHHQCMMEALRSAVEAVRPRQPIDYIYISG 518 Query: 96 ------KDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIE 149 ++P E + S G G N + +VF L W+ H Q + Sbjct: 519 DTPPAQREPAAEHFRTEATCTVAILSMQSSGIGHNFTC-ASTVVFTELDWNPSTHLQCED 577 Query: 150 RIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 R+ + G + + YL+A+ T D ++ L+TK ++ + Sbjct: 578 RV-----HRIGQAQPCHIKYLLAEGTSDSVIWPLLQTKLSVTAAMFE 619 >gi|146087740|ref|XP_001465890.1| DNA helicase [Leishmania infantum JPCM5] Length = 935 Score = 68.8 bits (167), Expect = 4e-10, Method: Composition-based stats. Identities = 32/167 (19%), Positives = 60/167 (35%), Gaps = 27/167 (16%) Query: 51 VHDEKIKALEV----IIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTLD--------- 95 KI A++ I+E+ + +I+ H + L+ A R Sbjct: 459 TARAKIPAVQDYVSGIVEQHLDSGEKLILFAHHQCMMEALRSAVEAVRPRQPIDYIYISG 518 Query: 96 ------KDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIE 149 ++P E + S G G N + +VF L W+ H Q + Sbjct: 519 DTPPAQREPAAEHFRTEATCTVAILSMQSSGIGHNFTC-ASTVVFTELDWNPSTHLQCED 577 Query: 150 RIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 R+ + G + + YL+A+ T D ++ L+TK ++ + Sbjct: 578 RV-----HRIGQAQPCHIKYLLAEGTSDSVIWPLLQTKLSVTAAMFE 619 >gi|242212599|ref|XP_002472132.1| predicted protein [Postia placenta Mad-698-R] gi|220728776|gb|EED82663.1| predicted protein [Postia placenta Mad-698-R] Length = 468 Score = 68.8 bits (167), Expect = 4e-10, Method: Composition-based stats. Identities = 17/99 (17%), Positives = 42/99 (42%), Gaps = 6/99 (6%) Query: 106 EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 + + + G G+NL +I+V + + Q ++R + G + V Sbjct: 10 DSDKFIFLLTTRAGGLGINLTT-ADIVVLYDSDLISQADLQAMDR-----AHRIGQTKQV 63 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIH 204 +V+ I + +++E +L+R K + L++ + + Sbjct: 64 YVFRFITEGSVEERMLERTAQKLRLDQLVMQQSRMQHTK 102 >gi|327287818|ref|XP_003228625.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1-like [Anolis carolinensis] Length = 960 Score = 68.8 bits (167), Expect = 4e-10, Method: Composition-based stats. Identities = 28/143 (19%), Positives = 59/143 (41%), Gaps = 18/143 (12%) Query: 56 IKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQ---------GRTLDKDPCTI-QEWN 105 I+ + ++E +V H L + +A + G T + ++ QE+ Sbjct: 752 IEYILDLLESGKEK-FLVFAHHKLVLDAIAEALAKKHIGYIRIDGSTPSAERQSLCQEFQ 810 Query: 106 -EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA 164 K+ + + GL L +++VF L+W+ Q +R + G + Sbjct: 811 LSEKLSVAVLSLTAANMGLTL-SSADLVVFAELFWNPGVLIQAEDR-----AHRIGQTSS 864 Query: 165 VFVYYLIAQNTIDELVLQRLRTK 187 V ++YL+A+ T D+ + ++ K Sbjct: 865 VNIHYLVAKGTADDYLWPMIQEK 887 >gi|167525194|ref|XP_001746932.1| hypothetical protein [Monosiga brevicollis MX1] gi|163774712|gb|EDQ88339.1| predicted protein [Monosiga brevicollis MX1] Length = 712 Score = 68.8 bits (167), Expect = 4e-10, Method: Composition-based stats. Identities = 30/150 (20%), Positives = 60/150 (40%), Gaps = 19/150 (12%) Query: 59 LEVIIEKANAAPIIVAYHFNSDLARL-----QKAFPQGRTLDKDPCTIQEW--NEGK--- 108 LE ++ + +++ H + L L Q+ R P +++ N + Sbjct: 411 LEDLMN--HDGKLLIFAHHKTLLDELATFLCQRQLRHIRIDGSTPTHLRQQLCNSFQDDV 468 Query: 109 -IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFV 167 + + G GL L + N +VF L+W+ Q +R + G + V V Sbjct: 469 LCRVAVLSITTAGTGLTL-HAANTVVFAELYWNPGHLYQAEDR-----AHRVGQRHNVNV 522 Query: 168 YYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 YL+ T+D+++ +L+ K+ I + Sbjct: 523 RYLLCPGTLDDVMWSQLQRKAKIVQRAMAG 552 >gi|301630532|ref|XP_002944371.1| PREDICTED: transcription termination factor 2-like [Xenopus (Silurana) tropicalis] Length = 143 Score = 68.8 bits (167), Expect = 4e-10, Method: Composition-based stats. Identities = 28/129 (21%), Positives = 51/129 (39%), Gaps = 11/129 (8%) Query: 72 IVAYHFNSDLARLQKAFPQGRTLDKDPCT-IQEWNEGKI--PLLFAHPASCGHGLNLQYG 128 IVA H L L A G K ++++N ++ + G GLNL G Sbjct: 4 IVAAHLK--LIGLSYATIDGSVNPKQRMDMVEDFNNNPKGPQVMLVSLCAGGVGLNLVGG 61 Query: 129 GNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKS 188 + L + W+ Q +RI + G ++ V ++ + T++E + Q K Sbjct: 62 NH-LFLLDMHWNPALEDQACDRI-----YRVGQQKDVVIHRFVCLGTVEEKISQLQEKKK 115 Query: 189 TIQDLLLNA 197 + +L+ Sbjct: 116 DLAKKVLSG 124 >gi|198465924|ref|XP_001353822.2| GA20306 [Drosophila pseudoobscura pseudoobscura] gi|198150371|gb|EAL29557.2| GA20306 [Drosophila pseudoobscura pseudoobscura] Length = 1259 Score = 68.8 bits (167), Expect = 4e-10, Method: Composition-based stats. Identities = 33/172 (19%), Positives = 66/172 (38%), Gaps = 23/172 (13%) Query: 46 KHWKEVHDEKIKALEVII----EKANAAPIIVAYHFNSDLARLQKAFPQGRTLDK--DPC 99 K KI + +I N A I++ + + L ++ A R + + Sbjct: 1088 KTMVGSFSTKITCIVQLILKITADDNQAKILIFSQWQAILEQISIALRLNRIVFRKCSNM 1147 Query: 100 TIQEWNEGKIPL--LFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 + E+ ++ + L + GLNL + + + + +Q I RI Sbjct: 1148 DLDEFKSTEMNVTCLLMALSRGSKGLNLIEATH-VFLVEPILNPGDERQAIGRI-----H 1201 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKS---------TIQDLLLNALKK 200 + G +A V+ I TI+E +L + + +++L L++LKK Sbjct: 1202 RFGQTKATTVHRFIVNGTIEENILSLISSADDSKTLGTHWDLENLTLDSLKK 1253 >gi|126667815|ref|ZP_01738782.1| Superfamily II DNA/RNA helicase [Marinobacter sp. ELB17] gi|126627763|gb|EAZ98393.1| Superfamily II DNA/RNA helicase [Marinobacter sp. ELB17] Length = 877 Score = 68.8 bits (167), Expect = 4e-10, Method: Composition-based stats. Identities = 36/195 (18%), Positives = 67/195 (34%), Gaps = 40/195 (20%) Query: 39 AVYYDEEKHWKEVHDEKIKALEVIIEKA----NAAPIIVAYH------FNSDLAR--LQK 86 AV+ + KE KI + ++E+A + I+ A+H + L +++ Sbjct: 593 AVFEQLSRQRKETALAKIPQVMELVEQALNEGSGKLILFAHHREVVEAYQDALNALFIKQ 652 Query: 87 AFPQGRT---------------------LDKDPCTIQEWN-EGKIPLLFAHPASCGHGLN 124 A Q R K + + K + + G G+ Sbjct: 653 AKAQDRETRQRIGTTQPNSLALVYGPTPKGKRQAEADRFQADPKCTVFLGSIGAAGVGIT 712 Query: 125 LQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRL 184 L ++F L W Q +R + G V V++ + +ID +++RL Sbjct: 713 LT-AATKVLFGELDWVPGIVSQAEDR-----AHRIGQLDNVLVWHAVVDGSIDARMVRRL 766 Query: 185 RTKSTIQDLLLNALK 199 K + D L+ K Sbjct: 767 IEKQKVLDSALDDEK 781 >gi|222624248|gb|EEE58380.1| hypothetical protein OsJ_09537 [Oryza sativa Japonica Group] Length = 1474 Score = 68.8 bits (167), Expect = 4e-10, Method: Composition-based stats. Identities = 23/133 (17%), Positives = 48/133 (36%), Gaps = 22/133 (16%) Query: 63 IEKANAAPIIVAYHFNSDLARLQKAFPQ---------------GRTLDKDPCTIQEWNE- 106 + +A ++V + L L+K + G T D+ + +N Sbjct: 1279 LSEATGGKVLVFSQYVRSLIFLEKLVSRMKGWKSEVHIFRVTGGSTQDQREQAVHRFNNS 1338 Query: 107 GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVF 166 + F +CG G++L I++ + R + R + G + V+ Sbjct: 1339 PDARVFFGSIKACGEGISLVGASRIVILD------VHENPSVMRQAIGRAYRPGQSKMVY 1392 Query: 167 VYYLIAQNTIDEL 179 Y L+A ++ +E Sbjct: 1393 CYRLVAADSPEED 1405 >gi|294676842|ref|YP_003577457.1| SNF2 family helicase [Rhodobacter capsulatus SB 1003] gi|294475662|gb|ADE85050.1| helicase, SNF2 family [Rhodobacter capsulatus SB 1003] Length = 412 Score = 68.8 bits (167), Expect = 4e-10, Method: Composition-based stats. Identities = 24/137 (17%), Positives = 45/137 (32%), Gaps = 27/137 (19%) Query: 52 HDEKIKALEVIIEK--ANAAPIIVA-------YHFNSD------LARLQKAFPQGRTLDK 96 ++ A I+ + A +V Y F L R+ + + Sbjct: 193 ASARLAATFDILRQIRAKGERALVFIEHRQMQYRFIEIARAEFGLDRI-DLINGETPIAQ 251 Query: 97 DPCTIQEWNE-----GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERI 151 + + G LL P + G GL L + ++ S WW+ +Q +R+ Sbjct: 252 RQQIVNRFQAHLEQGGGFDLLVLGPKAAGTGLTLTAATH-VIHLSRWWNPAAEEQCNDRV 310 Query: 152 GVTRQRQAGFKRAVFVY 168 + G R V ++ Sbjct: 311 -----HRLGQTRPVQIH 322 >gi|322492158|emb|CBZ27432.1| putative helicase-like protein [Leishmania mexicana MHOM/GT/2001/U1103] Length = 1261 Score = 68.8 bits (167), Expect = 4e-10, Method: Composition-based stats. Identities = 33/204 (16%), Positives = 75/204 (36%), Gaps = 15/204 (7%) Query: 9 RELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKAN- 67 EL K + ++L A+ DE+ + + + LE +I K N Sbjct: 781 EELCVPPSLNYTPLLEDGVKLLVAIKLVAAAMARDEKVLLFSLSTQLLTFLEHMIAKVNI 840 Query: 68 --AAPII-VAYHFNSDLAR-LQKAFPQGRT-LDKDPCTIQEWNEGKIP-LLFAHPASCGH 121 P+ + L R ++ G + +++++ P L + G Sbjct: 841 EWRRPVAASQRQPHPQLPRPIRYCRLDGSHSAAQRAAMLEDFDRSHGPDLFLLSTKAGGV 900 Query: 122 GLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVL 181 G+ + ++ ++ + QQ I R + G R V+VY L+ T++ + Sbjct: 901 GITVT-AATRVILVDTSFNPADDQQAIGR-----AYRYGQTRPVYVYRLMCYPTLEYSIF 954 Query: 182 QRLRTKSTIQDLLLN--ALKKETI 203 + K + ++ ++K++ + Sbjct: 955 VQKLAKEWLFKTVIEESSVKRDGL 978 >gi|37651342|ref|NP_932651.1| global transactivator-like protein [Choristoneura fumiferana DEF MNPV] gi|37499251|gb|AAQ91650.1| global transactivator-like protein [Choristoneura fumiferana DEF MNPV] Length = 499 Score = 68.8 bits (167), Expect = 4e-10, Method: Composition-based stats. Identities = 35/227 (15%), Positives = 75/227 (33%), Gaps = 40/227 (17%) Query: 3 QYHKFQREL-------YCDLQGENIEAFNSASKTVKCLQLANGAVYYD------------ 43 Y K + E + + + Q+ Sbjct: 265 VYDKLKSESQRAYDDAVAGGGDKTRNMQDVLWLLCRLRQMCCHPALTKCAHMFADQATIF 324 Query: 44 EEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQ---------GRTL 94 E ++ ++ ++ +++ N ++V + L + K Q G+ Sbjct: 325 EPQYASSKCRRVLEIVQQVLDTPNDKVVLV-SQWVEFLYIVAKLLRQRGIPILLYTGQLR 383 Query: 95 DKDPCTIQ-EWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERI 151 ++ ++ ++N P +L G GLNL G N +V W+ + Q RI Sbjct: 384 VEERTAVENQFNAADSPYRVLLMSINCGGVGLNLTGG-NHIVMLEPHWNPQIELQAQSRI 442 Query: 152 GVTRQRQAGFKRAVFVYYLIA--QNTIDELVLQRLRTKSTIQDLLLN 196 + G K+ +VY ++ N+I+ + R K T + + + Sbjct: 443 -----HRMGQKKQTYVYKMLNDEDNSIERYMKMRQDKKLTFVNKVFD 484 >gi|116191603|ref|XP_001221614.1| hypothetical protein CHGG_05519 [Chaetomium globosum CBS 148.51] gi|88181432|gb|EAQ88900.1| hypothetical protein CHGG_05519 [Chaetomium globosum CBS 148.51] Length = 219 Score = 68.8 bits (167), Expect = 4e-10, Method: Composition-based stats. Identities = 20/72 (27%), Positives = 27/72 (37%), Gaps = 6/72 (8%) Query: 119 CGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDE 178 HGLNL N + F WW Q RI + G + V L+A ++DE Sbjct: 42 GAHGLNLT-AANRAIVFDHWWHEGLECQAFARI-----HRIGQTKTVHTIKLVAAGSMDE 95 Query: 179 LVLQRLRTKSTI 190 +L K Sbjct: 96 TILGMQARKRET 107 >gi|156407998|ref|XP_001641644.1| predicted protein [Nematostella vectensis] gi|156228783|gb|EDO49581.1| predicted protein [Nematostella vectensis] Length = 532 Score = 68.8 bits (167), Expect = 5e-10, Method: Composition-based stats. Identities = 26/141 (18%), Positives = 53/141 (37%), Gaps = 19/141 (13%) Query: 61 VIIEKANAAPIIVAYHFNSDLARLQKAF---------PQGRTLDKDPCTI-QEWNEGKIP 110 ++E +V H L + G+T + ++ + K Sbjct: 378 DLLE--GGHKFLVFGHHQDMLDAISDCLMHKKYSYIRIDGKTPSSKRQMLCDQFQKDKNT 435 Query: 111 L-LFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYY 169 + + GL L G +VF L+W+ Q +R+ + G K +V ++Y Sbjct: 436 VVAVLSITAANTGLTLTEG-TAVVFAELFWNPGALVQAEDRV-----YRIGQKNSVNIHY 489 Query: 170 LIAQNTIDELVLQRLRTKSTI 190 L+A+ T D+ + ++ K + Sbjct: 490 LVAKGTADDYLWPLIQHKLDV 510 >gi|326922946|ref|XP_003207703.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1-like [Meleagris gallopavo] Length = 760 Score = 68.8 bits (167), Expect = 5e-10, Method: Composition-based stats. Identities = 40/199 (20%), Positives = 75/199 (37%), Gaps = 26/199 (13%) Query: 8 QRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVH-----DEKI-KALEV 61 QR++ I A A + ++A G +EK + + KI +E Sbjct: 477 QRKMVVVAPEG-INAKTKAMLAAEAKKMAKGYESKQQEKEALLLFYNRTAEAKIHSVIEY 535 Query: 62 IIE--KANAAPIIVAYHFNSDLARL-----QKAFPQGRTLDKDPCTIQ-----EWN-EGK 108 I+E ++ +V H L + +K F R P + ++ K Sbjct: 536 ILELLESGKDKFLVFAHHKVVLDAIVEELEKKHFDYIRIDGSTPSAERQSLCQKFQLSEK 595 Query: 109 IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVY 168 + + GL L +++VF L+W+ Q +R + G +V V+ Sbjct: 596 QAVAVLSLTAANMGLTL-SAADLVVFAELFWNPGVLIQAEDR-----AHRIGQTSSVNVH 649 Query: 169 YLIAQNTIDELVLQRLRTK 187 YL+A+ T D+ + ++ K Sbjct: 650 YLVARGTADDFLWPMIQEK 668 >gi|168046653|ref|XP_001775787.1| SNF2 family DNA-dependent ATPase [Physcomitrella patens subsp. patens] gi|162672794|gb|EDQ59326.1| SNF2 family DNA-dependent ATPase [Physcomitrella patens subsp. patens] Length = 657 Score = 68.4 bits (166), Expect = 5e-10, Method: Composition-based stats. Identities = 32/166 (19%), Positives = 60/166 (36%), Gaps = 19/166 (11%) Query: 45 EKHWKEVHDEKIKALEVIIEKANAA--PIIVAYHFNSDLARLQK----------AFPQGR 92 K + E K+ A++ + A +V H S L +++ G Sbjct: 488 NKIYTESAVVKLPAVQEYLTTMIDAECKFLVFAHHQSMLDGIEQLLMKKKVGLIRIDGGT 547 Query: 93 TLDKDPCTIQEWNEGK-IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERI 151 + + E I + G GL L + ++F + W + Q +R Sbjct: 548 PQSARQALVTRFQENDNIIAAVLGIRAAGVGLTLT-AASTVIFAEMSWTPGDLVQAEDR- 605 Query: 152 GVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + G +V VYYL A +TID+++ ++ K +L+ Sbjct: 606 ----AHRIGQASSVNVYYLHAHDTIDDIIWDTVQNKLENLSQVLDG 647 >gi|126310663|ref|XP_001370692.1| PREDICTED: similar to SNF2 histone linker PHD RING helicase [Monodelphis domestica] Length = 1686 Score = 68.4 bits (166), Expect = 5e-10, Method: Composition-based stats. Identities = 32/164 (19%), Positives = 58/164 (35%), Gaps = 18/164 (10%) Query: 35 LANGAVYYDEEKHWKEVHDEKIKA----LEVIIEKANAAPIIVAYHFNSDLARLQKAFPQ 90 +E+ K H K++A L+ I K A +V + L + KA Sbjct: 1494 FTAETANQEEDIPVKGSHSTKVEAVVRTLKRIQFKNPGAKSLVFSTWQDVLDIISKALYD 1553 Query: 91 GRTLDKDPCTIQEWNE--------GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLE 142 + I + E KI +L + +GLN+ ++L + Sbjct: 1554 NNMVFAQINGINRFQENLSAFKYDPKINILLLPLHTGSNGLNIIEATHVL-LVEPILNPA 1612 Query: 143 EHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRT 186 Q I R+ + G + V+ + + TI+E + L+T Sbjct: 1613 HELQAIGRV-----HRIGQTKPTIVHRFLIKATIEERMQAMLKT 1651 >gi|330797634|ref|XP_003286864.1| hypothetical protein DICPUDRAFT_31594 [Dictyostelium purpureum] gi|325083166|gb|EGC36626.1| hypothetical protein DICPUDRAFT_31594 [Dictyostelium purpureum] Length = 534 Score = 68.4 bits (166), Expect = 5e-10, Method: Composition-based stats. Identities = 24/158 (15%), Positives = 50/158 (31%), Gaps = 27/158 (17%) Query: 54 EKIKA----LEV-IIEKANAAPIIVAYHFNSDLARLQKAFPQGRT--------------- 93 K+ A L+ + + ++ H + + + + Sbjct: 380 YKLSAINQFLKDKLTDAPPDQKFLIFAHHKGVIEGICNMLRKIKIDKEKLDFITIVGSTQ 439 Query: 94 -LDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIG 152 +++ + K + + G GL L ++F L W Q +R Sbjct: 440 AQNRNELVNHFQSNPKCRIAVLSITAAGTGLTLT-AATCVIFAELLWTPGVLFQAEDR-- 496 Query: 153 VTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 + G +V V YLI T+DE + + +K + Sbjct: 497 ---AHRYGQTSSVLVQYLIGMGTVDESIWNLVESKKNL 531 >gi|261417323|ref|YP_003251006.1| SNF2-related protein [Fibrobacter succinogenes subsp. succinogenes S85] gi|261373779|gb|ACX76524.1| SNF2-related protein [Fibrobacter succinogenes subsp. succinogenes S85] Length = 861 Score = 68.4 bits (166), Expect = 5e-10, Method: Composition-based stats. Identities = 28/155 (18%), Positives = 55/155 (35%), Gaps = 17/155 (10%) Query: 53 DEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQKAFPQ--------GRTLDKDPCTIQ 102 K+K ++ I+ +A ++V F + ++ + I Sbjct: 526 SGKLKRIKEIVRQAKFENRKVLVFSFFLETIKKVCAYLNDSCMEPITGAVPVSHRQEIID 585 Query: 103 EWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGF 161 + +L + G GLN+Q N+++ Q I R + G Sbjct: 586 AFEKSPAGTVLPLQINAGGLGLNIQ-AANVVILCEPQLKPSAEMQAISR-----AYRMGQ 639 Query: 162 KRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 R V VY L+ ++IDE + L+ K + + + Sbjct: 640 VRNVLVYRLLMLDSIDEKINTLLKFKKQVFNTFAD 674 >gi|302325414|gb|ADL24615.1| SNF2/helicase domain protein [Fibrobacter succinogenes subsp. succinogenes S85] Length = 864 Score = 68.4 bits (166), Expect = 5e-10, Method: Composition-based stats. Identities = 28/155 (18%), Positives = 55/155 (35%), Gaps = 17/155 (10%) Query: 53 DEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQKAFPQ--------GRTLDKDPCTIQ 102 K+K ++ I+ +A ++V F + ++ + I Sbjct: 529 SGKLKRIKEIVRQAKFENRKVLVFSFFLETIKKVCAYLNDSCMEPITGAVPVSHRQEIID 588 Query: 103 EWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGF 161 + +L + G GLN+Q N+++ Q I R + G Sbjct: 589 AFEKSPAGTVLPLQINAGGLGLNIQ-AANVVILCEPQLKPSAEMQAISR-----AYRMGQ 642 Query: 162 KRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 R V VY L+ ++IDE + L+ K + + + Sbjct: 643 VRNVLVYRLLMLDSIDEKINTLLKFKKQVFNTFAD 677 >gi|83318951|emb|CAJ38813.1| Lodestar protein [Platynereis dumerilii] Length = 1130 Score = 68.4 bits (166), Expect = 5e-10, Method: Composition-based stats. Identities = 23/128 (17%), Positives = 48/128 (37%), Gaps = 21/128 (16%) Query: 56 IKALEVIIEKA---NAAPIIVAYHFNSDLARLQKAFPQGRTL----------DKDPCTIQ 102 ++ ++ I +++ N + ++ + L ++ K + Sbjct: 1009 LEKIKEIKKESPPGNPSKCVIVSQWTKMLDVIEYHLKSEGVQCCSIRGDMPPKKRSEIVD 1068 Query: 103 EWNEGKI--PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 +N ++ + G GLNL GGN L+ L W+ Q +RI + G Sbjct: 1069 LFNTPSSGPEVMLLSLRAGGVGLNL-IGGNHLIMVDLHWNPALEAQACDRI-----YRVG 1122 Query: 161 FKRAVFVY 168 K+ VF++ Sbjct: 1123 QKKDVFIH 1130 >gi|256004417|ref|ZP_05429397.1| helicase domain protein [Clostridium thermocellum DSM 2360] gi|255991558|gb|EEU01660.1| helicase domain protein [Clostridium thermocellum DSM 2360] gi|316941350|gb|ADU75384.1| SNF2-related protein [Clostridium thermocellum DSM 1313] Length = 889 Score = 68.4 bits (166), Expect = 5e-10, Method: Composition-based stats. Identities = 38/147 (25%), Positives = 62/147 (42%), Gaps = 18/147 (12%) Query: 53 DEKIKALEVIIEKANA----APIIVAYHF---NSDLARLQKAFPQGRTLDKDPCTIQEWN 105 D K++ L II+ A II+ F S L +L K ++ +I+E N Sbjct: 454 DVKVEPLFEIIDDLFAEDRQRKIIIFTEFVATQSYLVKLLKDRGYSTSILNGSMSIEERN 513 Query: 106 E-----GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 + + G GLNLQ+ N ++ + L W+ + +Q I R+ + G Sbjct: 514 AVLHEFKTQTDILISTDAGGEGLNLQFS-NCIINYDLPWNPMKIEQRIGRVD-----RIG 567 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTK 187 +R V VY I +T++ V L K Sbjct: 568 QQRDVVVYNFILADTVENRVKTVLEEK 594 >gi|48696694|ref|YP_024988.1| superfamily II DNA/RNA helicase [Vibrio phage VP5] gi|40806157|gb|AAR92075.1| superfamily II DNA/RNA helicase [Vibrio phage VP5] Length = 489 Score = 68.4 bits (166), Expect = 5e-10, Method: Composition-based stats. Identities = 32/218 (14%), Positives = 78/218 (35%), Gaps = 26/218 (11%) Query: 5 HKFQRELYCDLQGENIEAFNSASKTVKCLQLANG-AVYYDEEK----HWKEVHDEKIKA- 58 + + + G+ + + + Q+ G + D++ + K+ A Sbjct: 271 KELKDFFETEQDGDVLTVSTVLDRMTRFQQILGGNFPFLDKDGAYDVKPISGPNPKMDAM 330 Query: 59 LEVIIEKANAAPIIVAYHFNSDLA----RLQKAFPQGRTLD--------KDPCTIQEWNE 106 LE I + A +I+ F +++ RL++ + ++ +I + + Sbjct: 331 LEDIADLDRNAKVIIWARFRAEIEQISKRLREVYGDDSVIEYHGGISESDRKASIPRFQD 390 Query: 107 GKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA 164 P A+ + G G+ L ++S + LE+ Q R + G + Sbjct: 391 SSDPSRFFVANQQTAGMGITLTI-ATFAYYYSNSFSLEQRLQ-----SEDRNHRKGQRNV 444 Query: 165 VFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKET 202 + + D +V + L++K + L+ L++ Sbjct: 445 CTYIDIWCKADADLMVGRALKSKKDLAVLVDEELQRRI 482 >gi|288553361|ref|YP_003425296.1| Snf2/Rad54 family helicase [Bacillus pseudofirmus OF4] gi|288544521|gb|ADC48404.1| Snf2/Rad54 family helicase [Bacillus pseudofirmus OF4] Length = 560 Score = 68.4 bits (166), Expect = 5e-10, Method: Composition-based stats. Identities = 27/150 (18%), Positives = 58/150 (38%), Gaps = 15/150 (10%) Query: 54 EKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRT--------LDKDPCTIQEWN 105 K + +++K N +I+ + + LQ Q + Sbjct: 353 AKAEKALELVKKINDK-VIIFTEYRATQLYLQWYLKQNGISSVPFRGGFKRGKKDWMRQL 411 Query: 106 EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 + + G G+NLQ+ + ++ F L W+ +Q I RI + G K V Sbjct: 412 FESHAQVLIATEAGGEGINLQF-CSHIINFDLPWNPMRIEQRIGRI-----HRLGQKNDV 465 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 +Y ++T+++ +L+ L K + + ++ Sbjct: 466 HIYNFAVEDTVEQHILKLLYEKIHLFESVI 495 >gi|320590298|gb|EFX02741.1| snf2 family helicase [Grosmannia clavigera kw1407] Length = 1240 Score = 68.4 bits (166), Expect = 6e-10, Method: Composition-based stats. Identities = 27/143 (18%), Positives = 53/143 (37%), Gaps = 19/143 (13%) Query: 67 NAAPI--IVAYHFNSDLARLQKAFPQGRT----------LDKDPCTIQEW-NEGKIPLLF 113 + PI +V + S L +++A + + ++ + ++ Sbjct: 1082 DEQPIKSVVFSGWTSHLDLIERALRDNGIAFCRLDGKMSRTARTQAMDTFRDDPSVHVIL 1141 Query: 114 AHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQ 173 + G GLNL GN + ++ Q I+R+ + G KR V I Sbjct: 1142 VSIMAGGLGLNLT-AGNYVYVMEPQYNPAAEAQAIDRV-----HRLGQKRPVHTVRFIMN 1195 Query: 174 NTIDELVLQRLRTKSTIQDLLLN 196 + +E +L+ K + +L LN Sbjct: 1196 RSFEERMLEIQADKIKLANLSLN 1218 >gi|255079200|ref|XP_002503180.1| SNF2 super family [Micromonas sp. RCC299] gi|226518446|gb|ACO64438.1| SNF2 super family [Micromonas sp. RCC299] Length = 1345 Score = 68.4 bits (166), Expect = 6e-10, Method: Composition-based stats. Identities = 34/185 (18%), Positives = 64/185 (34%), Gaps = 40/185 (21%) Query: 26 ASKTVKCLQL---ANGAVY---YDEEKHWKEVHD-----EKIKALEVII--EKANAAPII 72 + +C++L N D+ W+ D K+ L+ ++ +A ++ Sbjct: 787 LALQNRCMELRKVCNHPALNYPTDKGGEWRTGEDLVRTCGKLWMLDRMLIKLRAAGHRVL 846 Query: 73 VAYHFNSDLARLQKAFP----------------QGRT-LDKDPCTIQEWNEG--KIPLLF 113 + L L+ G T LD I +N K + Sbjct: 847 LFSTMTKLLDLLETYLKWRMTTPAGEGLEWCRIDGSTALDLREEAITAFNAPGSKKFIFL 906 Query: 114 AHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQ 173 + G GLNLQ + +V + + + +Q + R + G +R V V ++ A Sbjct: 907 LSIRAAGRGLNLQT-ADTVVVYDPDPNPKNEEQAVAR-----SHRIGQRREVRVLHMEA- 959 Query: 174 NTIDE 178 +DE Sbjct: 960 -VMDE 963 >gi|170061901|ref|XP_001866436.1| conserved hypothetical protein [Culex quinquefasciatus] gi|167880007|gb|EDS43390.1| conserved hypothetical protein [Culex quinquefasciatus] Length = 706 Score = 68.4 bits (166), Expect = 6e-10, Method: Composition-based stats. Identities = 23/135 (17%), Positives = 48/135 (35%), Gaps = 17/135 (12%) Query: 67 NAAPIIVAYHFNSDLARLQKAFPQGRT----------LDKDPCTIQEWNEGK-IPLLFAH 115 ++ H L + + + + D + ++ Sbjct: 504 EGQKFLIFAHHIKMLDAVSRELDKLKVDHIRIDGTTRSDVRSELVNKFQTKDACRAAILS 563 Query: 116 PASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNT 175 +C G+ L +++F L W+ Q +R + G + AV V YL+A+ T Sbjct: 564 LKACNAGITLT-AAQLVIFAELDWNPSTLAQA-----ESRAHRIGQEGAVLVRYLLAKGT 617 Query: 176 IDELVLQRLRTKSTI 190 D+++ L+ K T+ Sbjct: 618 ADDIIWTMLQKKQTV 632 >gi|118403613|ref|NP_001072923.1| SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1 [Xenopus (Silurana) tropicalis] gi|123908803|sp|Q0P4U8|SMAL1_XENTR RecName: Full=SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1; AltName: Full=HepA-related protein; AltName: Full=Sucrose nonfermenting protein 2-like 1 gi|112418502|gb|AAI21898.1| SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a-like 1 [Xenopus (Silurana) tropicalis] Length = 942 Score = 68.4 bits (166), Expect = 6e-10, Method: Composition-based stats. Identities = 26/166 (15%), Positives = 60/166 (36%), Gaps = 20/166 (12%) Query: 45 EKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQ-----------GRT 93 + + ++ + ++E +V H L + + + + Sbjct: 706 NRTAEAKIRSVLEYIMDLLES-GREKFLVFAHHKLVLDHICEELGKKDVPYIRIDGNTSS 764 Query: 94 LDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGV 153 D+ + K + + GL L +++VF L+W+ Q +R+ Sbjct: 765 ADRQSLCHKFQMSEKSCVAVLSITAANMGLTL-SSADLVVFAELFWNPGVLIQAEDRV-- 821 Query: 154 TRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTI--QDLLLNA 197 + G +V ++YL+A+ T D+ + ++ K + Q L A Sbjct: 822 ---HRIGQTSSVNIHYLVAKGTADDYLWPMIQEKIKVLGQAGLSEA 864 >gi|297624923|ref|YP_003706357.1| helicase domain-containing protein [Truepera radiovictrix DSM 17093] gi|297166103|gb|ADI15814.1| helicase domain protein [Truepera radiovictrix DSM 17093] Length = 1091 Score = 68.4 bits (166), Expect = 6e-10, Method: Composition-based stats. Identities = 30/145 (20%), Positives = 62/145 (42%), Gaps = 17/145 (11%) Query: 53 DEKIKALEVIIEKA-NAAPIIVAYHFNSDLARLQKAFPQ---------GRTLDKDPCTIQ 102 D K+ L+ I++ N +++ L + + + G ++ + Sbjct: 467 DRKLTELQKILQSLPNGEKLLIFTEHKDTLTFIMRVLGKRGYTATSIDGSMRLEERIAAE 526 Query: 103 EWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFK 162 ++ A + G G+NLQ+ +++V + + W+ +Q + R+ + G + Sbjct: 527 RAFRDSCRVMVA-TEAAGEGINLQF-CSVMVNYDIPWNPTRLEQRMGRV-----HRYGQR 579 Query: 163 RAVFVYYLIAQNTIDELVLQRLRTK 187 V +Y L+AQ T + VL RL TK Sbjct: 580 YDVRIYNLVAQGTREGDVLGRLLTK 604 >gi|313681099|ref|YP_004058838.1| helicase domain protein [Oceanithermus profundus DSM 14977] gi|313153814|gb|ADR37665.1| helicase domain protein [Oceanithermus profundus DSM 14977] Length = 1133 Score = 68.4 bits (166), Expect = 6e-10, Method: Composition-based stats. Identities = 34/202 (16%), Positives = 72/202 (35%), Gaps = 39/202 (19%) Query: 8 QRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKAN 67 +REL ++ + + +LA + +++ W+E+ ++ E I Sbjct: 448 KRELELEI-----------ASLERLEKLARRVLQAGQDRKWQEL--ARLMGTEEI----K 490 Query: 68 AAPIIVAYHFNSDLARLQKA--------------FPQGRTLDKDPCTIQEWNEGKIPLLF 113 +++ L L+ R ++ + N + +L Sbjct: 491 GRKLVIFTEHRDTLDYLRNRLHTFLGNEDALVTIHGGMRREERHHAQAEFTNNKDVLVLL 550 Query: 114 AHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQ 173 A + G G+NLQ ++L+ + + W+ +Q RI + G ++ L+A+ Sbjct: 551 A-TDAAGEGINLQQ-AHLLINYDIPWNPNRLEQRFGRI-----HRIGQTEVCHMWNLVAR 603 Query: 174 NTIDELVLQRLRTK-STIQDLL 194 T + V L K D L Sbjct: 604 GTREGDVFALLLKKLEAAADAL 625 >gi|315645021|ref|ZP_07898147.1| SNF2-related protein [Paenibacillus vortex V453] gi|315279442|gb|EFU42747.1| SNF2-related protein [Paenibacillus vortex V453] Length = 94 Score = 68.0 bits (165), Expect = 6e-10, Method: Composition-based stats. Identities = 17/73 (23%), Positives = 36/73 (49%), Gaps = 6/73 (8%) Query: 123 LNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQ 182 +NL N ++ + WW+ Q +R+ + G R V V+ LI+Q T++E + + Sbjct: 1 MNLTR-ANHVLHYDRWWNPAVENQATDRVF-----RIGQHRNVQVHKLISQGTLEERIDE 54 Query: 183 RLRTKSTIQDLLL 195 + K + + ++ Sbjct: 55 LIEQKKALSEQVV 67 >gi|154246918|ref|YP_001417876.1| helicase domain-containing protein [Xanthobacter autotrophicus Py2] gi|154161003|gb|ABS68219.1| helicase domain protein [Xanthobacter autotrophicus Py2] Length = 1167 Score = 68.0 bits (165), Expect = 6e-10, Method: Composition-based stats. Identities = 38/210 (18%), Positives = 81/210 (38%), Gaps = 30/210 (14%) Query: 1 MKQYHKFQRELYCDLQGENIEAFNSA---------SKTVKCLQ-LANGAVYYDEEKHWKE 50 ++ ++ +E +L+ +A +T+K L+ +A G + + W + Sbjct: 431 LRNIEEYGQEEIDELEDLISTGATTAETVEQLALEVETLKGLETMALGVLRSGVDTKWSQ 490 Query: 51 VHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQ-------------KAFPQGRTLDKD 97 ++ L I N +I+ L L + G + ++ Sbjct: 491 LNRILDDDLM-IDSAGNRRKLIIFTEPKDTLHYLLDKVRARLGNPEAVEVIHGGVSREER 549 Query: 98 PCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 ++ + + K L+ + G G+NLQ G +++V + L W+ + +Q RI Sbjct: 550 RKVVERFMQDKDMLVLIANDAAGEGVNLQRG-HLMVNYDLPWNPNKIEQRFGRI-----H 603 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTK 187 + G ++ L+A +T + V RL K Sbjct: 604 RIGQTEVCHLWNLVAADTREGEVYARLLEK 633 >gi|71410768|ref|XP_807662.1| helicase-like protein [Trypanosoma cruzi strain CL Brener] gi|70871713|gb|EAN85811.1| helicase-like protein, putative [Trypanosoma cruzi] Length = 1060 Score = 68.0 bits (165), Expect = 6e-10, Method: Composition-based stats. Identities = 20/111 (18%), Positives = 46/111 (41%), Gaps = 9/111 (8%) Query: 96 KDPCTIQEWNE-GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 + T++ +N +L + G G+N+ +++ +R + Sbjct: 691 ERENTLRSFNSLRGADVLLLSMKAGGVGINITSATRVIL------ADSGFNPADDRQAIG 744 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN--ALKKETI 203 R + G R VFVY L+ T++ + Q+ K + ++ +LK++ + Sbjct: 745 RAYRYGQTRPVFVYRLVCYQTLEHRMFQQKVAKEWLFHTIVEEASLKRDAL 795 >gi|323136172|ref|ZP_08071254.1| SNF2-related protein [Methylocystis sp. ATCC 49242] gi|322398246|gb|EFY00766.1| SNF2-related protein [Methylocystis sp. ATCC 49242] Length = 1027 Score = 68.0 bits (165), Expect = 6e-10, Method: Composition-based stats. Identities = 28/170 (16%), Positives = 56/170 (32%), Gaps = 31/170 (18%) Query: 51 VHDEKIKALEVIIE--KANAAPIIVA---YHFNSDLARLQKAFPQGRTLD---------K 96 ++ A I+ A +V L +A +D K Sbjct: 808 GASARLSATFEILRRIAAKGERALVFIEHRQMQHRFIELARAEFGLSRIDLINGDTPIPK 867 Query: 97 DPCTIQEWN-----EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERI 151 + + + +L P + G GL L + ++ S WW+ +Q +R+ Sbjct: 868 RQAIVNRFQQHLEEDRGFDILVLGPKAAGVGLTLTAATH-VIHLSRWWNPAVEEQCNDRV 926 Query: 152 GVTRQRQAGFKRAVFVYYLIA------QNTIDELVLQRLRTKSTIQDLLL 195 + G R V ++ +A +N+ D L+ ++ K + L Sbjct: 927 -----HRLGQTRPVSIHLPMAIHPGYRENSFDCLLQSLMQRKRKLASSAL 971 >gi|119192670|ref|XP_001246941.1| hypothetical protein CIMG_00712 [Coccidioides immitis RS] Length = 980 Score = 68.0 bits (165), Expect = 7e-10, Method: Composition-based stats. Identities = 22/90 (24%), Positives = 41/90 (45%), Gaps = 7/90 (7%) Query: 101 IQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQA 159 I+E+ + I +L + + G GL+L + LWW+ QQ R+ + Sbjct: 853 IEEFRTDPSIRVLISSLKAGGTGLSLTM-AEKCILIDLWWNEAMEQQAFCRLF-----RY 906 Query: 160 GFKRAVFVYYLIAQNTIDELVLQRLRTKST 189 G K+ V + + +N+ID+ + KS+ Sbjct: 907 GQKKEVEIVRITVKNSIDDRIQLIQNAKSS 936 >gi|297812227|ref|XP_002873997.1| hypothetical protein ARALYDRAFT_351139 [Arabidopsis lyrata subsp. lyrata] gi|297319834|gb|EFH50256.1| hypothetical protein ARALYDRAFT_351139 [Arabidopsis lyrata subsp. lyrata] Length = 1260 Score = 68.0 bits (165), Expect = 7e-10, Method: Composition-based stats. Identities = 22/106 (20%), Positives = 49/106 (46%), Gaps = 8/106 (7%) Query: 93 TLDKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 L + I ++ E P +L A +C G++L + ++ W+ + +Q I R Sbjct: 1117 ELFERGRVIDKFEEPGNPSRVLLASITACAEGISLT-AASRVIMLDSEWNPSKTKQAIAR 1175 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + G ++ V+VY L+++ T++E +R K + ++ + Sbjct: 1176 -----AFRPGQQKVVYVYQLLSRGTLEEDKYRRTTWKEWVSSMIFS 1216 >gi|293373681|ref|ZP_06620028.1| SNF2 family N-terminal domain protein [Bacteroides ovatus SD CMC 3f] gi|292631336|gb|EFF49967.1| SNF2 family N-terminal domain protein [Bacteroides ovatus SD CMC 3f] Length = 695 Score = 68.0 bits (165), Expect = 7e-10, Method: Composition-based stats. Identities = 36/181 (19%), Positives = 68/181 (37%), Gaps = 20/181 (11%) Query: 24 NSASKTVKCLQLANGAV--YYDEEKHWKEVHDEKI--KALEVIIEKANAAPIIVAYHFNS 79 N T LQ + ++E+ + K K L+ + + I+ N Sbjct: 506 NELVSTSARLQATIKFLDSIKEKEEKVIIFVERKETQKMLQKLCNERYG---IICKIING 562 Query: 80 DLARLQKAFPQGRTLDKDPCTIQEWNEGK-IPLLFAHPASCGHGLNLQYGGNILVFFSLW 138 D + K R +I E+ ++ P + G GLN+ N ++ +S Sbjct: 563 DTPSIIKRHSFDR--QTRQASINEFQAVDGFNVIIMSPVAAGMGLNVT-AANHVIHYSRH 619 Query: 139 WDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIA----QNTIDELVLQRLRTKSTIQDLL 194 W+ + Q +R + G + V+VYY +A T DE++ L K+++ Sbjct: 620 WNPAKESQATDR-----AYRIGQTKDVYVYYPMAVTSDIKTFDEILDDLLSRKTSLATST 674 Query: 195 L 195 + Sbjct: 675 I 675 >gi|76162997|gb|AAX30749.2| SJCHGC07413 protein [Schistosoma japonicum] Length = 70 Score = 68.0 bits (165), Expect = 7e-10, Method: Composition-based stats. Identities = 16/69 (23%), Positives = 26/69 (37%), Gaps = 6/69 (8%) Query: 108 KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFV 167 I + G G+NL +L+ + W+ Q ER + G R V + Sbjct: 4 DIFVFLLTTRVGGLGVNLTSANRVLI-YDPDWNPTTDLQARERAW-----RIGQSRDVVI 57 Query: 168 YYLIAQNTI 176 Y L+ T+ Sbjct: 58 YRLLTSGTV 66 >gi|299067109|emb|CBJ38305.1| putative Helicase domain protein [Ralstonia solanacearum CMR15] Length = 461 Score = 68.0 bits (165), Expect = 7e-10, Method: Composition-based stats. Identities = 37/181 (20%), Positives = 70/181 (38%), Gaps = 21/181 (11%) Query: 36 ANGAVYYDEEKHWKEVHDEKIKALEVII-------EKANAAPIIVAYHFNSDLARLQKAF 88 NG ++ E K E + + ++E + P I+ N + L ++ Sbjct: 257 TNGMLFALEAKTLSERREARRTSMEDRVRECAKRVSAEPGQPWIIWCDLNDESDALTRSI 316 Query: 89 PQGRT------LDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLE 142 L++ ++ ++EGK ++ P+ GHGLN Q+ + F + E Sbjct: 317 EGAMEVRGSMDLEEKEDRLRAFSEGKARVIVTKPSIAGHGLNWQHAA-RMAFVGVTDSYE 375 Query: 143 EHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKET 202 + Q + RI + G KR V+ ++ + V+ L+ K + AL ET Sbjct: 376 AYYQAVRRIW-----RFGQKRDCHVHIFASK--AEGAVVANLKRKEREAAQMAEALSAET 428 Query: 203 I 203 Sbjct: 429 R 429 >gi|330870418|gb|EGH05127.1| SNF2-related:helicase [Pseudomonas syringae pv. aesculi str. 0893_23] Length = 101 Score = 68.0 bits (165), Expect = 8e-10, Method: Composition-based stats. Identities = 22/92 (23%), Positives = 37/92 (40%), Gaps = 6/92 (6%) Query: 105 NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA 164 + + ++ G G NL N + F L W Q +R + G R Sbjct: 1 QDPDCRVFIGTRSAAGTGYNLT-AANYVFFLGLPWTPGLQDQAEDR-----AYRNGQLRV 54 Query: 165 VFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 V V +A++TID+ + Q L K + L++ Sbjct: 55 VVVKIPLAEDTIDQQLWQMLMDKRALASDLID 86 >gi|323704524|ref|ZP_08116102.1| helicase domain protein [Thermoanaerobacterium xylanolyticum LX-11] gi|323535986|gb|EGB25759.1| helicase domain protein [Thermoanaerobacterium xylanolyticum LX-11] Length = 893 Score = 68.0 bits (165), Expect = 8e-10, Method: Composition-based stats. Identities = 37/158 (23%), Positives = 65/158 (41%), Gaps = 25/158 (15%) Query: 63 IEKANAAPIIVAYHFNSDLARLQKAFPQ----GRTLDKDPCTIQEWNE----GKIPLLFA 114 +E + +I+ F + L+K + L+ + N K + Sbjct: 467 MEHSEKPKVIIFTEFIATQEFLRKFLQEKGYSVAILNGTMSIEERNNAIDEFKKSADILV 526 Query: 115 HPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQN 174 + G GLNLQ+ NI++ + L W+ + +Q I RI + G KR V V + + Sbjct: 527 STDAGGEGLNLQF-CNIMINYDLPWNPMKIEQRIGRID-----RIGQKRDVVVINYVLSD 580 Query: 175 TIDELVLQRLRTK----------STIQDLLLNALKKET 202 TI+ V Q L K +QD +L++++ E Sbjct: 581 TIEFRVRQVLEEKLKIIFEQFGVDKMQD-ILDSVQSEM 617 >gi|242051685|ref|XP_002454988.1| hypothetical protein SORBIDRAFT_03g002565 [Sorghum bicolor] gi|241926963|gb|EES00108.1| hypothetical protein SORBIDRAFT_03g002565 [Sorghum bicolor] Length = 104 Score = 68.0 bits (165), Expect = 8e-10, Method: Composition-based stats. Identities = 16/90 (17%), Positives = 40/90 (44%), Gaps = 7/90 (7%) Query: 99 CTIQEWNE-GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 ++++N ++ ++ + LN+ ++L+ + LWW+ Q ++R Sbjct: 13 KAVKDFNMVPEVTIIIMSLKAASLSLNMVAACHVLMLY-LWWNSTTEDQAMDR-----AH 66 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTK 187 + G V V L ++T+++ +L K Sbjct: 67 RIGQTWVVMVSQLTIKDTLEDCILGLQEKK 96 >gi|295695496|ref|YP_003588734.1| SNF2-related protein [Bacillus tusciae DSM 2912] gi|295411098|gb|ADG05590.1| SNF2-related protein [Bacillus tusciae DSM 2912] Length = 688 Score = 68.0 bits (165), Expect = 8e-10, Method: Composition-based stats. Identities = 39/156 (25%), Positives = 64/156 (41%), Gaps = 19/156 (12%) Query: 53 DEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKA----------FPQGRTLDKDPCTIQ 102 K+ L I+ A +IV + + L +A F G T + + Sbjct: 482 SAKVAELIRIL-SAFGDKMIVFTKYRATQEILVRALRRRDFRVAEFHGGLTRKEKDREVA 540 Query: 103 EWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFK 162 + E + + G G NLQ+ N +V F L W+ +Q I RI + G Sbjct: 541 YFRE-EADV-LVSTEVGGEGRNLQF-CNGMVNFDLPWNPMAIEQRIGRI-----HRIGQT 592 Query: 163 RAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNAL 198 R VFVY L A +T++ +L L K + +L++ + Sbjct: 593 RDVFVYNLAALHTLEHHMLDVLDRKINLFELVVGEV 628 >gi|145610845|ref|XP_368376.2| hypothetical protein MGG_00868 [Magnaporthe oryzae 70-15] gi|145018188|gb|EDK02467.1| hypothetical protein MGG_00868 [Magnaporthe oryzae 70-15] Length = 861 Score = 68.0 bits (165), Expect = 8e-10, Method: Composition-based stats. Identities = 27/109 (24%), Positives = 50/109 (45%), Gaps = 7/109 (6%) Query: 96 KDPCTIQEWNEGKIP-LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 + I+ + + P ++F G GLNLQ N+++ ++WW +Q E Sbjct: 749 ERERVIRNFTDATGPRVMFVSRGVGGQGLNLQ-AANVVIQCNVWW-----KQSWEEHAWG 802 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETI 203 R + G R VFVY + A+ +D +R K+ +++ + +E I Sbjct: 803 RVHRPGQTRPVFVYQIEARCQVDAYKKERRDAKNETNSMIMERITREDI 851 >gi|48696652|ref|YP_024431.1| superfamily II DNA/RNA helicase [Vibrio phage VP2] gi|40950050|gb|AAR97641.1| superfamily II DNA/RNA helicase [Vibrio phage VP2] Length = 472 Score = 68.0 bits (165), Expect = 8e-10, Method: Composition-based stats. Identities = 32/218 (14%), Positives = 78/218 (35%), Gaps = 26/218 (11%) Query: 5 HKFQRELYCDLQGENIEAFNSASKTVKCLQLANG-AVYYDEEK----HWKEVHDEKIKA- 58 + + + G+ + + + Q+ G + D++ + K+ A Sbjct: 254 KELKDFFETEQDGDVLTVSTVLDRMTRFQQILGGNFPFLDKDGAYDVKPISGPNPKMDAM 313 Query: 59 LEVIIEKANAAPIIVAYHFNSDLA----RLQKAFPQGRTLD--------KDPCTIQEWNE 106 LE I + A +I+ F +++ RL++ + ++ +I + + Sbjct: 314 LEDIADLDRNAKVIIWARFRAEIEQISKRLREVYGDDSVIEYHGGISESDRKASIPRFQD 373 Query: 107 GKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA 164 P A+ + G G+ L ++S + LE+ Q R + G + Sbjct: 374 SSDPSRFFVANQQTAGMGITLTI-ATFAYYYSNSFSLEQRLQ-----SEDRNHRKGQRNV 427 Query: 165 VFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKET 202 + + D +V + L++K + L+ L++ Sbjct: 428 CTYIDIWCKADADLMVGRALKSKKDLAVLVDEELQRRI 465 >gi|312131273|ref|YP_003998613.1| snf2-related protein [Leadbetterella byssophila DSM 17132] gi|311907819|gb|ADQ18260.1| SNF2-related protein [Leadbetterella byssophila DSM 17132] Length = 773 Score = 67.7 bits (164), Expect = 8e-10, Method: Composition-based stats. Identities = 25/140 (17%), Positives = 57/140 (40%), Gaps = 19/140 (13%) Query: 69 APIIVAYHFNSDLARLQ----------KAFPQGRTLDKDPCTIQEWNEG-KIPLLFAHPA 117 +++ + + L ++ + + ++N + + Sbjct: 561 QKVLIFSEWLAVLDKIAIILQRNEIDFAVLTGNVPVKSRQKLVDQFNTDQRCRVFLC-TE 619 Query: 118 SCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA-VFVYYLIAQNTI 176 + G GLNLQ + ++ F L W+ + Q I RI + G K + + + LI +++I Sbjct: 620 TAGSGLNLQ-SADTVINFELPWNPAKKNQRIGRID-----RIGQKNSKLTIINLIMRDSI 673 Query: 177 DELVLQRLRTKSTIQDLLLN 196 + ++Q L+ K + D +L Sbjct: 674 ETKLIQGLKLKQDLFDSILE 693 >gi|115387833|ref|XP_001211422.1| predicted protein [Aspergillus terreus NIH2624] gi|114195506|gb|EAU37206.1| predicted protein [Aspergillus terreus NIH2624] Length = 914 Score = 67.7 bits (164), Expect = 8e-10, Method: Composition-based stats. Identities = 30/164 (18%), Positives = 59/164 (35%), Gaps = 18/164 (10%) Query: 42 YDEEKHWKEVHDEKIKAL-EVIIEKANAAPIIVAYHFNSDLARLQKAFPQG-----RTLD 95 D+ + + KI L + + + I+ + L ++K R Sbjct: 752 SDDSVFQPDGYSSKINMLVSDVQDSLDTTKSIIFSCWTRTLDLVEKHLRMADILFLRIDG 811 Query: 96 KDPCTIQ-----EWNE-GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIE 149 K P ++ ++N + +L + G GLNLQ N + W+ Q I Sbjct: 812 KTPPQVRQERLDKFNTTSTVAVLIMTTGTGGVGLNLQ-SVNRVFIVEPQWNPSVETQAIA 870 Query: 150 RIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDL 193 R + G ++ V V Q +I+E + + K ++ + Sbjct: 871 R-----AIRLGQEQTVSVIRYYVQGSIEEDMCSQQTRKLSLSKM 909 >gi|20219037|gb|AAM15781.1|AC104428_2 Hypothetical protein [Oryza sativa Japonica Group] gi|108706352|gb|ABF94147.1| SNF2 domain-containing protein, putative, expressed [Oryza sativa Japonica Group] Length = 1197 Score = 67.7 bits (164), Expect = 8e-10, Method: Composition-based stats. Identities = 23/133 (17%), Positives = 47/133 (35%), Gaps = 22/133 (16%) Query: 63 IEKANAAPIIVAYHFNSDLARLQK---------------AFPQGRTLDKDPCTIQEWNE- 106 + +A ++V + L L+K G T D+ + +N Sbjct: 1014 LSEATGGKVLVFSQYVRSLIFLEKLVSRMKGWKSEVHIFRVTGGSTQDQREQAVHRFNNS 1073 Query: 107 GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVF 166 + F +CG G++L I++ + R + R + G + V+ Sbjct: 1074 PDARVFFGSIKACGEGISLVGASRIVILD------VHENPSVMRQAIGRAYRPGQSKMVY 1127 Query: 167 VYYLIAQNTIDEL 179 Y L+A ++ +E Sbjct: 1128 CYRLVAADSPEED 1140 >gi|298712291|emb|CBJ26742.1| conserved unknown protein [Ectocarpus siliculosus] Length = 1307 Score = 67.7 bits (164), Expect = 9e-10, Method: Composition-based stats. Identities = 32/156 (20%), Positives = 57/156 (36%), Gaps = 22/156 (14%) Query: 50 EVHDEKIKALEVIIEKANAA----PIIVAYHFNSDLARLQKAFPQG----RTL------- 94 V + K+KAL + +A +V FNS L L++ P+ RTL Sbjct: 1095 VVMETKLKALVEKLAGIHAKDPTSKSLVFSQFNSSLEWLKRTLPKRGFQFRTLTGNMSRT 1154 Query: 95 DKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 + + + S G+NL N+ + +E+ + Sbjct: 1155 QRTAALTAFAKDPPTTVFLLSVRSGAVGINLTQANNVFL------LEPLLNLALEKQAIG 1208 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 R + G R V V L+ +++I+ +L L+ K Sbjct: 1209 RVYRLGQTRPVTVTKLVLKDSIETRIL-ALQKKQAT 1243 >gi|195342588|ref|XP_002037882.1| GM18506 [Drosophila sechellia] gi|194132732|gb|EDW54300.1| GM18506 [Drosophila sechellia] Length = 592 Score = 67.7 bits (164), Expect = 9e-10, Method: Composition-based stats. Identities = 27/143 (18%), Positives = 53/143 (37%), Gaps = 19/143 (13%) Query: 59 LEVIIEKANAAPIIVAYHFNSDLARLQKAF---------PQGRTL-DKDPCTIQEWNEGK 108 L+ I+++ I+ H + + G+T D ++ + + Sbjct: 365 LKTIVKEQ--KKFIIFAHHRVMMDAISDFLSGLKVHYIRIDGQTRSDLRSDSVDTFQKKS 422 Query: 109 -IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFV 167 + +C G+ L I+VF L W+ Q +R + G + V Sbjct: 423 SCKVALLSLKACNSGITLT-AAEIIVFAELDWNPSTLAQA-----ESRAHRIGQTKPVIC 476 Query: 168 YYLIAQNTIDELVLQRLRTKSTI 190 YL+A NT D+++ L+ K + Sbjct: 477 RYLMAHNTADDIIWNMLKNKQEV 499 >gi|167629278|ref|YP_001679777.1| snf2 family helicase, putative [Heliobacterium modesticaldum Ice1] gi|167592018|gb|ABZ83766.1| snf2 family helicase, putative [Heliobacterium modesticaldum Ice1] Length = 581 Score = 67.7 bits (164), Expect = 9e-10, Method: Composition-based stats. Identities = 36/158 (22%), Positives = 65/158 (41%), Gaps = 21/158 (13%) Query: 49 KEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQG-----------RTLDKD 97 K H K AL ++ N +IV F+ L + + + L+K+ Sbjct: 365 KVPHRAKADALVQLLRGLNDK-VIVFTGFSETHRYLVRRLTEAGFAVAQLHGGMKRLEKE 423 Query: 98 PCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 + + + G NLQ+ LV + L W+ + +Q I RI Sbjct: 424 EQVRYF---ADVAQVLLSTETGSEGRNLQF-CRCLVNYDLPWNPMQIEQRIGRI-----H 474 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 + G +R V++Y L AQ+T++ +L+ L K + L++ Sbjct: 475 RIGQERDVYIYNLSAQDTLEAHMLELLDAKINMFQLVV 512 >gi|328697302|ref|XP_001945056.2| PREDICTED: SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1-like [Acyrthosiphon pisum] Length = 656 Score = 67.7 bits (164), Expect = 9e-10, Method: Composition-based stats. Identities = 23/151 (15%), Positives = 54/151 (35%), Gaps = 19/151 (12%) Query: 50 EVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQKAFP---------QGRTLDKDP 98 + K+ A+ I + IV H + + G+T ++ Sbjct: 446 HTGEAKLPAICDYILNLLKDGKKFIVFAHHQKVINGICDVLENNETYYIRIDGKTSSEER 505 Query: 99 CTI-QEWNEGKI-PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 + ++ + + + G+ L +++F L+W+ Q +R Sbjct: 506 KCVCDQFQSEDMYRVAVLSICAANSGITLT-AAKLVIFAELYWNPGILTQAEDR-----A 559 Query: 157 RQAGFKRAVFVYYLIAQNTIDELVLQRLRTK 187 + G V + YL+A+ T D+ + +++K Sbjct: 560 HRIGQAETVTIQYLLAKGTADDHIWPLIQSK 590 >gi|309702945|emb|CBJ02276.1| putative phage protein [Escherichia coli ETEC H10407] Length = 286 Score = 67.7 bits (164), Expect = 1e-09, Method: Composition-based stats. Identities = 23/45 (51%), Positives = 36/45 (80%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEK 46 +QY + ++E++ +L GE IEA N+A+KT+KCLQ+A+GAVY D+ Sbjct: 241 QQYREMEKEMFLELNGEGIEAPNAAAKTLKCLQIASGAVYTDDTG 285 >gi|298385364|ref|ZP_06994922.1| SNF2 family protein [Bacteroides sp. 1_1_14] gi|298261505|gb|EFI04371.1| SNF2 family protein [Bacteroides sp. 1_1_14] Length = 2373 Score = 67.7 bits (164), Expect = 1e-09, Method: Composition-based stats. Identities = 23/107 (21%), Positives = 46/107 (42%) Query: 91 GRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 G T+ K ++ N G++ ++ + G G+N+Q + L+ ++ Q R Sbjct: 729 GMTVKKKLEIFEKVNRGEVRVILGSTFTLGTGVNIQERLHTLIHLDAPNRPMDYTQRNGR 788 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 I + V + ++++D QRL+TK I D ++N Sbjct: 789 ILRQGNLHKDMNKPVRILRFGVEDSLDVTAYQRLKTKGAIADSIMNG 835 >gi|194856372|ref|XP_001968736.1| GG25032 [Drosophila erecta] gi|190660603|gb|EDV57795.1| GG25032 [Drosophila erecta] Length = 754 Score = 67.7 bits (164), Expect = 1e-09, Method: Composition-based stats. Identities = 25/143 (17%), Positives = 49/143 (34%), Gaps = 19/143 (13%) Query: 59 LEVIIEKANAAPIIVAYHFNSDLARLQKAF---------PQGRTLDKDPCTIQE--WNEG 107 L+ ++++ I+ H + + G+T + N+ Sbjct: 527 LKTLVKEQ--KKFIIFAHHRVMMDAISDCLSGLKIHYIRIDGQTRSDLRSDFVDTFQNKS 584 Query: 108 KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFV 167 + +C G+ L I+VF L W+ Q +R + G + V Sbjct: 585 SCKVALLSLKACNSGITLT-AAEIIVFAELDWNPSTLAQA-----ESRAHRIGQTKPVIC 638 Query: 168 YYLIAQNTIDELVLQRLRTKSTI 190 YL+A T D+ + L+ K + Sbjct: 639 RYLMAHKTADDTIWNMLKNKQEV 661 >gi|126462608|ref|YP_001043722.1| helicase domain-containing protein [Rhodobacter sphaeroides ATCC 17029] gi|126104272|gb|ABN76950.1| helicase domain protein [Rhodobacter sphaeroides ATCC 17029] Length = 1170 Score = 67.7 bits (164), Expect = 1e-09, Method: Composition-based stats. Identities = 36/185 (19%), Positives = 72/185 (38%), Gaps = 21/185 (11%) Query: 17 GENIEAFNSASKTVKCLQ-LANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAY 75 E +E +T+K L+ +A + ++ W ++ L I N +I+ Sbjct: 455 AETVEQLEIEVQTLKGLEIMALDVLRSGKDTKWTQLDRILDDELM-IDSDGNRRKLIIFT 513 Query: 76 HFNSDLARLQKAFP-------------QGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHG 122 L L + G T ++ ++ + + + L+ + G G Sbjct: 514 EPKDTLHYLLEKIRARLGRPDAVEVIHGGVTREERRKVVERFMQDRDMLVLIANDAAGEG 573 Query: 123 LNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQ 182 +NLQ G +++V + L W+ + +Q RI + G ++ L+A +T + V Sbjct: 574 VNLQRG-HLMVNYDLPWNPNKIEQRFGRI-----HRIGQTEVCHLWNLVAADTREGEVYA 627 Query: 183 RLRTK 187 RL K Sbjct: 628 RLLEK 632 >gi|170027903|ref|XP_001841836.1| DNA repair protein RAD16 [Culex quinquefasciatus] gi|167868306|gb|EDS31689.1| DNA repair protein RAD16 [Culex quinquefasciatus] Length = 1276 Score = 67.7 bits (164), Expect = 1e-09, Method: Composition-based stats. Identities = 26/127 (20%), Positives = 48/127 (37%), Gaps = 15/127 (11%) Query: 68 AAPIIVAYHFNSDLARLQKAFP--------QGRTLDKDPCTIQEWNEGKIPLLFAHPASC 119 II+ H++ L L +A + K +++ G I L + Sbjct: 1124 DVKIIIFSHWDPILFYLAQALDTNSVTYRLKSAKFYKHIEEFKDYTNG-ITCLLLPLKAG 1182 Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 GLNL + + + E Q + R+ + G + FV+ I QNTI+E Sbjct: 1183 SKGLNLTEATH-VFLVEPILNPGEELQAVGRV-----HRIGQTKPTFVHRFIVQNTIEET 1236 Query: 180 VLQRLRT 186 + + ++ Sbjct: 1237 IHRTVQA 1243 >gi|146095356|ref|XP_001467556.1| helicase [Leishmania infantum JPCM5] gi|134071921|emb|CAM70616.1| helicase-like protein [Leishmania infantum JPCM5] Length = 908 Score = 67.7 bits (164), Expect = 1e-09, Method: Composition-based stats. Identities = 19/88 (21%), Positives = 39/88 (44%), Gaps = 7/88 (7%) Query: 109 IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVY 168 + L + G GLNL G + ++ ++ Q ++R + G + V +Y Sbjct: 742 VFLFLISTRAGGTGLNLT-GADTVILLDGDFNPHNDLQAVDRC-----HRIGQRNPVALY 795 Query: 169 YLIAQNTI-DELVLQRLRTKSTIQDLLL 195 L++ +T+ DE + K ++ L+L Sbjct: 796 RLVSPHTVEDERHSGIVDRKLKLEHLVL 823 >gi|66822083|ref|XP_644396.1| SNF2-related domain-containing protein [Dictyostelium discoideum AX4] gi|66823325|ref|XP_645017.1| SNF2-related domain-containing protein [Dictyostelium discoideum AX4] gi|60472519|gb|EAL70471.1| SNF2-related domain-containing protein [Dictyostelium discoideum AX4] gi|60473216|gb|EAL71164.1| SNF2-related domain-containing protein [Dictyostelium discoideum AX4] Length = 1518 Score = 67.7 bits (164), Expect = 1e-09, Method: Composition-based stats. Identities = 33/155 (21%), Positives = 60/155 (38%), Gaps = 27/155 (17%) Query: 46 KHWKEVHDEKIK----ALEVIIEKANAAPIIVAYHFN-------------SDLARLQKAF 88 K K + K++ L+ I+E IV FN +L+R+ K + Sbjct: 1241 KEPKLIDCAKLEYLIMRLKEIVEI--GEKCIVFSAFNDTLKDIVWTVSRIPELSRVYKIY 1298 Query: 89 PQGRTLDKDPCTIQEWNEGKIPLLFAHPAS--CGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 TL + + ++ S +GLN+ N ++F W + QQ Sbjct: 1299 MTELTLKQRANIVSDFQTKDSEFNIIIMNSDLAAYGLNIT-AANHIIFVDPIWFASKEQQ 1357 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVL 181 I+R + G + VFV LI +N+ ++ ++ Sbjct: 1358 SIKR-----SHRIGQTKPVFVEKLIIENSCEQQLI 1387 >gi|301321575|gb|ADK68965.1| Superfamily II DNA/RNA helicase, SNF2 family [Gordonia sp. KTR9] Length = 1136 Score = 67.7 bits (164), Expect = 1e-09, Method: Composition-based stats. Identities = 42/208 (20%), Positives = 79/208 (37%), Gaps = 33/208 (15%) Query: 5 HKFQRELYCDLQGENIEAFNSAS----KTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 ++ E L+ + ++A +A + ++LA+ + +K + D K L Sbjct: 420 DEYNAEELEQLEEDVMDAATAAQTVEELNAELVELAD--LIATAKKVREAGTDRKWTELS 477 Query: 61 VIIEK------ANAAP--IIVAYHFNSDLARLQ-------------KAFPQGRTLDKDPC 99 I++ +N P I+ L LQ KA G + Sbjct: 478 TILQDNALVTDSNGWPRKFIIFTEHRDTLDYLQSKIGSLLGKPDSVKAIHGGVRRGERRV 537 Query: 100 TIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQA 159 +E+ + + + + G GLNLQ +++V + L W+ +Q RI + Sbjct: 538 ITEEFTKNRDVQILIATDAAGEGLNLQ-AAHLMVNYDLPWNPNRIEQRFGRI-----HRI 591 Query: 160 GFKRAVFVYYLIAQNTIDELVLQRLRTK 187 G + ++ L+A NT + V RL K Sbjct: 592 GQEEVCRLWNLVASNTREGEVFTRLLEK 619 >gi|269793095|ref|YP_003317999.1| helicase domain-containing protein [Thermanaerovibrio acidaminovorans DSM 6589] gi|269100730|gb|ACZ19717.1| helicase domain protein [Thermanaerovibrio acidaminovorans DSM 6589] Length = 969 Score = 67.7 bits (164), Expect = 1e-09, Method: Composition-based stats. Identities = 26/156 (16%), Positives = 58/156 (37%), Gaps = 22/156 (14%) Query: 50 EVHDEKIKALEVII------EKANAAPIIVAYHFNSDLARLQKAFPQ---------GRTL 94 + D K +AL I E ++V F L + + G Sbjct: 473 QGPDAKAEALLDWIYRLQAEEGDPDLKVLVFTEFVPTQEMLMRFLTERGITVVCLNGSMD 532 Query: 95 DKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 ++ +Q+ + + + G GLNLQ+ ++++ + + W+ +Q I R+ Sbjct: 533 LEERKRVQDAFAKDVRI-LISTDAGGEGLNLQF-CHVVINYDIPWNPMRLEQRIGRVD-- 588 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 + G V + +++++ V + L K + Sbjct: 589 ---RIGQTHTVRAINFVFEDSVEHRVREVLEEKLAV 621 >gi|157869750|ref|XP_001683426.1| hypothetical protein [Leishmania major strain Friedlin] Length = 471 Score = 67.7 bits (164), Expect = 1e-09, Method: Composition-based stats. Identities = 16/86 (18%), Positives = 35/86 (40%), Gaps = 6/86 (6%) Query: 112 LFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLI 171 + G GLNLQ + + + ++ + Q + R+ + G + V V+ LI Sbjct: 124 FLISKVAGGAGLNLQ-AADTVFLLDVDYNPQRDAQALSRV-----YRVGQSKEVRVFRLI 177 Query: 172 AQNTIDELVLQRLRTKSTIQDLLLNA 197 + I+ ++ K + ++ A Sbjct: 178 IDHAIEHDIVAIHEAKDDLGRAVVQA 203 >gi|324505946|gb|ADY42546.1| SMARCAL1-like protein [Ascaris suum] Length = 696 Score = 67.7 bits (164), Expect = 1e-09, Method: Composition-based stats. Identities = 32/180 (17%), Positives = 62/180 (34%), Gaps = 19/180 (10%) Query: 22 AFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDL 81 A++ A+ Q G Y K V + E A ++V H L Sbjct: 481 AYHGAADKDTKHQCLVGYYYETGIAKAKSVASHIVDNF--FYEGAPRRKVLVFAHHQVVL 538 Query: 82 ARL-QKAFPQG----------RTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGN 130 + +G + ++ + + + + G G+ L Sbjct: 539 DTISMYVTKKGLRSIRIDGTTASKSREEQCRLFQEDDDVVVAILSMTAAGLGITLT-AAT 597 Query: 131 ILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 ++VF L W+ +Q +R + G +VFV YL+A T D+++ ++ K + Sbjct: 598 VVVFAELHWNPGTLKQAEDR-----AHRVGQTDSVFVQYLLANRTADDVMWPLIQRKLDV 652 >gi|218847810|ref|YP_002454516.1| RecQ helicase, putative [Bacillus cereus G9842] gi|218546312|gb|ACK98704.1| RecQ helicase, putative [Bacillus cereus G9842] Length = 468 Score = 67.7 bits (164), Expect = 1e-09, Method: Composition-based stats. Identities = 34/156 (21%), Positives = 64/156 (41%), Gaps = 17/156 (10%) Query: 53 DEKIKALEV----IIEKANAAPIIVAYHFNSDLARLQKAFPQ-----GRTLDKD-PCTIQ 102 K++ L+ ++ + +++ + + ++ PQ G+ D++ I+ Sbjct: 286 SPKLEQLKTFTKQLLNDEPNSKVVIFTEYERMARIIYESLPQSVLYTGQISDREKNTVIE 345 Query: 103 EWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFK 162 + E F + GLNLQ N +V F L + E +Q RI + G Sbjct: 346 RFREDPHTRFFISTRAGSTGLNLQV-ANYMVHFDLPYTATELEQRNGRID-----RTGNN 399 Query: 163 -RAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + +YY I ++ DE +LQ L KS + +L Sbjct: 400 FSNITMYYYIMSDSYDEHMLQLLFKKSELAKEILTG 435 >gi|269860253|ref|XP_002649849.1| SWF/SNF family helicase [Enterocytozoon bieneusi H348] gi|220066790|gb|EED44262.1| SWF/SNF family helicase [Enterocytozoon bieneusi H348] Length = 878 Score = 67.3 bits (163), Expect = 1e-09, Method: Composition-based stats. Identities = 34/203 (16%), Positives = 66/203 (32%), Gaps = 28/203 (13%) Query: 15 LQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANA-----A 69 L+ + I + + A + + + K AL II Sbjct: 663 LEDKEINYSTAKHHLAILKDILKAASHPMHFSKTESIISTKTMALFDIINMCGGFENMRN 722 Query: 70 PIIVAYHFNSDLARLQKAFPQ-------------GRTLDKDPCTIQ----EWNEGKIPLL 112 +I+ + L + + ++ + I E+N +L Sbjct: 723 KMIIFFQNKKTLDIVYNELKKNNVNLKVLSNDIKYNEINNNKTDINIIANEFNNSDATIL 782 Query: 113 FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIA 172 + G NI+VF+ W+ Q ++R + G K+ V V LI Sbjct: 783 LSTTLLGGL-GLNLTMVNIVVFYEHDWNPFNDLQAMDR-----AHRLGQKQIVNVIRLIV 836 Query: 173 QNTIDELVLQRLRTKSTIQDLLL 195 ++TI+E V+ K I + ++ Sbjct: 837 KDTIEEKVMNYQNFKKYISEHII 859 >gi|119490437|ref|ZP_01622898.1| hypothetical protein L8106_27294 [Lyngbya sp. PCC 8106] gi|119453908|gb|EAW35063.1| hypothetical protein L8106_27294 [Lyngbya sp. PCC 8106] Length = 1140 Score = 67.3 bits (163), Expect = 1e-09, Method: Composition-based stats. Identities = 28/161 (17%), Positives = 66/161 (40%), Gaps = 27/161 (16%) Query: 45 EKHWKEVHDEKIKALEVIIEKAN-------AAPIIVAYHFNSDLARLQKAFPQ------- 90 ++ + + K+ L+ +++++ +++ L L++ Q Sbjct: 461 QETIELGTERKLNELQNLLKRSEFDELSEGEGRLLIFTEHRDTLQYLKQNLQQWGYSTCE 520 Query: 91 ----GRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 +D+ +I + G G+NLQ+ ++V + + W+ +Q Sbjct: 521 IHGGMNVIDRKTAQKNFQFNKQI---CIATEAAGEGINLQF-CRLMVNYDIPWNPNRLEQ 576 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTK 187 + RI + G KR V+++ +A NT++ VL++L K Sbjct: 577 RMGRI-----HRIGQKRDVYIFNFVAVNTVEGRVLEKLLKK 612 >gi|297736548|emb|CBI25419.3| unnamed protein product [Vitis vinifera] Length = 1635 Score = 67.3 bits (163), Expect = 1e-09, Method: Composition-based stats. Identities = 39/194 (20%), Positives = 73/194 (37%), Gaps = 23/194 (11%) Query: 7 FQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKA 66 F RE +L+ + SK L L N + E+ + I I +K Sbjct: 1374 FSREELLELKKHKDD-VKKGSKVKFVLSLVNRCIIRKEKILIFCHNISPINLFVDIFDKL 1432 Query: 67 ----NAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHG 122 ++V DL F +GR +D+ G +L A +C G Sbjct: 1433 YKWKKGEDVLV---LQGDLE----LFERGRVMDQFEEP-----GGASKVLLASITACAEG 1480 Query: 123 LNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQ 182 ++L + ++ W+ + +Q + R + G +R V+VY L+ +T++E Sbjct: 1481 ISLT-AASRVILLDTEWNPSKQKQAVAR-----AFRPGQERVVYVYQLLETDTLEEEKNS 1534 Query: 183 RLRTKSTIQDLLLN 196 R K + ++ + Sbjct: 1535 RTNWKEWVSSMIFS 1548 >gi|222475692|ref|YP_002564213.1| helicase domain protein [Halorubrum lacusprofundi ATCC 49239] gi|222454063|gb|ACM58327.1| helicase domain protein [Halorubrum lacusprofundi ATCC 49239] Length = 584 Score = 67.3 bits (163), Expect = 1e-09, Method: Composition-based stats. Identities = 42/152 (27%), Positives = 67/152 (44%), Gaps = 24/152 (15%) Query: 54 EKIKALEVIIEKANAA----PIIVAYHFNSD----LARLQ------KAFPQGRTLDKDPC 99 K + L I+E+A +IV F + L RL AF G + + Sbjct: 364 TKQERLLDIVEEARETVEMGRVIVFTQFRATQRQVLDRLASEGYTVHAFHGGHSSSEKEQ 423 Query: 100 TIQEWNE-GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQ 158 ++++ E G I + G NLQ+ N+LV L W+ +Q I R+ + Sbjct: 424 IVEDFEEEGGI---LVSTDAMSEGRNLQF-CNLLVNLGLSWNPMRMEQRIGRV-----HR 474 Query: 159 AGFKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 G KR VFV+ + + T++E VL+RL K + Sbjct: 475 IGQKRDVFVFNMALKGTVEEYVLERLYHKIDL 506 >gi|195576640|ref|XP_002078183.1| GD23310 [Drosophila simulans] gi|194190192|gb|EDX03768.1| GD23310 [Drosophila simulans] Length = 755 Score = 67.3 bits (163), Expect = 1e-09, Method: Composition-based stats. Identities = 27/143 (18%), Positives = 53/143 (37%), Gaps = 19/143 (13%) Query: 59 LEVIIEKANAAPIIVAYHFNSDLARLQKAF---------PQGRTL-DKDPCTIQEWNEGK 108 L+ I+++ I+ H + + G+T D ++ + + Sbjct: 528 LKTIVKEQ--KKFIIFAHHRVMMDAISDFLSGLKVHYIRIDGQTRSDLRSDSVDTFQKKS 585 Query: 109 -IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFV 167 + +C G+ L I+VF L W+ Q +R + G + V Sbjct: 586 SCKVALLSLKACNSGITLT-AAEIIVFAELDWNPSTLAQA-----ESRAHRIGQTKPVIC 639 Query: 168 YYLIAQNTIDELVLQRLRTKSTI 190 YL+A NT D+++ L+ K + Sbjct: 640 RYLMAHNTADDIIWNMLKNKQEV 662 >gi|189036176|gb|ACD75438.1| AMDV4_9 [uncultured virus] Length = 542 Score = 67.3 bits (163), Expect = 1e-09, Method: Composition-based stats. Identities = 24/130 (18%), Positives = 53/130 (40%), Gaps = 16/130 (12%) Query: 56 IKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTL--------DKDPCTIQEWNEG 107 I+ +E ++E N I+V H + + + + F + +++ + N+ Sbjct: 394 IEHIENVLE--NEDKIVVFAHHHDVVDAIYEKFKDISVVATGNESLNERNDAVNKFQNDP 451 Query: 108 KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFV 167 + + G G+ L + ++F + W + Q +R+ + G K V V Sbjct: 452 SCKIFIGSIQAMGVGITLT-ASSTVIFTEIEWRPGDLTQAEDRL-----HRIGQKSTVLV 505 Query: 168 YYLIAQNTID 177 YL+ ++ID Sbjct: 506 QYLVVNDSID 515 >gi|147841648|emb|CAN75315.1| hypothetical protein VITISV_024158 [Vitis vinifera] Length = 1904 Score = 67.3 bits (163), Expect = 1e-09, Method: Composition-based stats. Identities = 39/194 (20%), Positives = 73/194 (37%), Gaps = 23/194 (11%) Query: 7 FQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKA 66 F RE +L+ + SK L L N + E+ + I I +K Sbjct: 1630 FSREELLELKKHKDD-VKKGSKVKFVLSLVNRCIIRKEKILIFCHNISPINLFVDIFDKL 1688 Query: 67 ----NAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHG 122 ++V DL F +GR +D+ G +L A +C G Sbjct: 1689 YKWKKGEDVLV---LQGDLE----LFERGRVMDQFEEP-----GGASKVLLASITACAEG 1736 Query: 123 LNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQ 182 ++L + ++ W+ + +Q + R + G +R V+VY L+ +T++E Sbjct: 1737 ISLT-AASRVILLDTEWNPSKQKQAVAR-----AFRPGQERVVYVYQLLETDTLEEEKNS 1790 Query: 183 RLRTKSTIQDLLLN 196 R K + ++ + Sbjct: 1791 RTNWKEWVSSMIFS 1804 >gi|302839751|ref|XP_002951432.1| hypothetical protein VOLCADRAFT_91908 [Volvox carteri f. nagariensis] gi|300263407|gb|EFJ47608.1| hypothetical protein VOLCADRAFT_91908 [Volvox carteri f. nagariensis] Length = 1592 Score = 67.3 bits (163), Expect = 1e-09, Method: Composition-based stats. Identities = 18/91 (19%), Positives = 35/91 (38%), Gaps = 8/91 (8%) Query: 84 LQKAFPQGRTLDKDPCTIQEWNEGK--IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDL 141 L + L+ I+++N I + + G GLNLQ + ++ + + Sbjct: 1065 LFRRIDGSTPLEIREDAIRDFNRPDSDIFIFLLSIRAAGRGLNLQTS-DTVIIYDPDPNP 1123 Query: 142 EEHQQMIERIGVTRQRQAGFKRAVFVYYLIA 172 + +Q I R + G + V V + A Sbjct: 1124 KNEEQAIAR-----SHRIGQTKEVRVVHFEA 1149 >gi|124801328|ref|XP_001349665.1| DEAD/DEAH box helicase, putative [Plasmodium falciparum 3D7] gi|3845262|gb|AAC71935.1| DEAD/DEAH box helicase, putative [Plasmodium falciparum 3D7] Length = 1997 Score = 67.3 bits (163), Expect = 1e-09, Method: Composition-based stats. Identities = 24/112 (21%), Positives = 45/112 (40%), Gaps = 8/112 (7%) Query: 88 FPQGRTLDKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQ 145 + D + N G + S GLNLQ + ++ F ++ + Sbjct: 1380 LKKEEINDFQIMDDKNVNGGNQDAMIFILSTRSGSLGLNLQT-ADTVIIFDSDFNPHQDI 1438 Query: 146 QMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 Q + R + G K V V+ I + ++ELV ++ + K +I D ++ A Sbjct: 1439 QAMCRC-----HRIGQKNVVKVFRFITLSGVEELVFKKAQHKLSINDKVIQA 1485 >gi|307564893|ref|ZP_07627418.1| conserved hypothetical protein [Prevotella amnii CRIS 21A-A] gi|307346429|gb|EFN91741.1| conserved hypothetical protein [Prevotella amnii CRIS 21A-A] Length = 3762 Score = 67.3 bits (163), Expect = 1e-09, Method: Composition-based stats. Identities = 24/110 (21%), Positives = 45/110 (40%) Query: 88 FPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQM 147 G T+ K + N G++ ++ + G G+N+Q + L+ ++ Q Sbjct: 1913 MKSGMTVKKKLEIFDKVNRGEVRVIMGSTFTLGTGVNIQERLHTLIHLDAPNRPMDYTQR 1972 Query: 148 IERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 RI + V V ++++D QRL+TK I D ++N Sbjct: 1973 NGRILRQGNIHKEMNKPVRVLRFGVEDSLDVTAYQRLKTKGAIADSIMNG 2022 >gi|73536510|ref|XP_847679.1| hypothetical protein [Leishmania major strain Friedlin] gi|321438592|emb|CBZ12351.1| conserved hypothetical protein [Leishmania major strain Friedlin] Length = 1576 Score = 67.3 bits (163), Expect = 1e-09, Method: Composition-based stats. Identities = 22/155 (14%), Positives = 54/155 (34%), Gaps = 19/155 (12%) Query: 63 IEKANAAPIIVAYHFNSDLARLQKAFPQ-----------GRTLDKDPCTIQEWNEGKIPL 111 I + +++ + S L + + + ++ C + N + Sbjct: 501 IVREQREKVVIFSQYLSHLRLMGQLLAREGISAPSLTGAASDAERCRCISELQNNDACRV 560 Query: 112 LFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLI 171 L + G G+ L + + + W+ + Q R+ + G R V +Y L Sbjct: 561 LLCSVRAGGVGIKLT-AASHCILLDVSWNPTDDMQATYRL-----YRYGQLRPVNIYRLA 614 Query: 172 AQNTIDELVLQRLRTKSTIQDLL--LNALKKETIH 204 T + +V +S +Q + ++ +++ H Sbjct: 615 TWGTSEHIVFAYALQRSWLQKKIADISDPRRQQRH 649 >gi|195472837|ref|XP_002088705.1| GE11268 [Drosophila yakuba] gi|194174806|gb|EDW88417.1| GE11268 [Drosophila yakuba] Length = 755 Score = 67.3 bits (163), Expect = 1e-09, Method: Composition-based stats. Identities = 25/133 (18%), Positives = 46/133 (34%), Gaps = 17/133 (12%) Query: 69 APIIVAYHFNSDLARLQKAF---------PQGRTL-DKDPCTIQEWNEGK-IPLLFAHPA 117 I+ H + + G+T D ++ + + + Sbjct: 536 KKFIIFAHHRVMMDAISDCLSGLKVHYIRIDGQTRSDLRSDSVDTFQKKSSCKVALLSLK 595 Query: 118 SCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 +C G+ L I+VF L W+ Q +R + G + V YL+A NT D Sbjct: 596 ACNSGITLT-AAEIIVFAELDWNPSTLAQA-----ESRAHRIGQTKPVICRYLMAHNTAD 649 Query: 178 ELVLQRLRTKSTI 190 + + L+ K + Sbjct: 650 DTIWNMLKNKQEV 662 >gi|195127015|ref|XP_002007964.1| GI12091 [Drosophila mojavensis] gi|193919573|gb|EDW18440.1| GI12091 [Drosophila mojavensis] Length = 1284 Score = 67.3 bits (163), Expect = 1e-09, Method: Composition-based stats. Identities = 25/157 (15%), Positives = 50/157 (31%), Gaps = 18/157 (11%) Query: 45 EKHWKEVHDEKIKALEVII-------EKANAAPIIVAYHFNSDLARLQKAFPQGRTLDK- 96 KI + ++ N I++ + + L + A Q + Sbjct: 1106 SSEVVGDFSTKITYIVDLVLKIKSESSDKNQEKILIFSQWPTILNHIASALSQNSIEYRS 1165 Query: 97 --DPCTIQEWNEGKIPL--LFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIG 152 I E+ + + L A GLNL + + E Q I R+ Sbjct: 1166 KFTNRDIDEFKDADRNVTCLLMPIARGSKGLNLIEATH-VFLVEPILTPGEELQAIGRV- 1223 Query: 153 VTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKST 189 + G + V+ I TI+E +++ +++ Sbjct: 1224 ----HRFGQTKPTTVHRFIVNGTIEENIMKLIKSADD 1256 >gi|148226355|ref|NP_001089668.1| SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1 [Xenopus laevis] gi|123903207|sp|Q498E7|SMAL1_XENLA RecName: Full=SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1; AltName: Full=HepA-related protein; AltName: Full=Sucrose nonfermenting protein 2-like 1 gi|71681279|gb|AAI00246.1| Smarcal1 protein [Xenopus laevis] Length = 960 Score = 67.3 bits (163), Expect = 1e-09, Method: Composition-based stats. Identities = 31/163 (19%), Positives = 61/163 (37%), Gaps = 22/163 (13%) Query: 51 VHDEKI-KALEVIIE--KANAAPIIVAYHFNSDLARLQKAFPQGRT-----------LDK 96 + KI LE II+ ++ +V H L + + + D+ Sbjct: 726 TAEAKIRSVLEYIIDLLESGREKFLVFAHHKLVLDNICEELGKKEVPYIRIDGNTSSADR 785 Query: 97 DPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 + K + + GL L +++VF L+W+ Q +R+ Sbjct: 786 QSLCHKFQFSEKSCVAVLSITAANMGLTL-SSADLVVFAELFWNPGVLIQAEDRV----- 839 Query: 157 RQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTI--QDLLLNA 197 + G +V ++YL+A+ T D+ + ++ K + Q L A Sbjct: 840 HRIGQTSSVNIHYLVAKGTADDYLWPMIQEKIKVLGQAGLSEA 882 >gi|223940612|ref|ZP_03632456.1| SNF2-related protein [bacterium Ellin514] gi|223890730|gb|EEF57247.1| SNF2-related protein [bacterium Ellin514] Length = 819 Score = 67.3 bits (163), Expect = 1e-09, Method: Composition-based stats. Identities = 28/94 (29%), Positives = 48/94 (51%), Gaps = 8/94 (8%) Query: 102 QEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGF 161 +E+ LL H S G NLQ+ + LV F L W+ E +Q I R+ + G Sbjct: 667 EEFRRRGGALLLTH--SGTEGRNLQFS-HRLVNFDLPWNPMEIEQRIGRL-----HRLGQ 718 Query: 162 KRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 +R V +Y L+ T+ E +L+ L+ K + ++++ Sbjct: 719 QRPVHIYNLVYAGTLQEQLLEILQEKLNLFEVVV 752 >gi|157819469|ref|NP_001100940.1| E3 ubiquitin-protein ligase SHPRH [Rattus norvegicus] gi|149039552|gb|EDL93714.1| SNF2 histone linker PHD RING helicase (predicted) [Rattus norvegicus] Length = 1701 Score = 67.3 bits (163), Expect = 1e-09, Method: Composition-based stats. Identities = 29/164 (17%), Positives = 59/164 (35%), Gaps = 18/164 (10%) Query: 35 LANGAVYYDEEKHWKEVHDEKIKA----LEVIIEKANAAPIIVAYHFNSDLARLQKA--- 87 + +++ K H K++A L I K A +V + L + KA Sbjct: 1509 FTSEKANQEDDIPVKGSHSTKVEAVVRTLMKIQLKDPGAKALVFSTWQDVLDIISKALTD 1568 Query: 88 ----FPQGRTLDKDPCTIQEW-NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLE 142 F Q + + + + +I +L + +GL + ++L + Sbjct: 1569 NNMGFTQISRIKTFQENLSAFKYDPQINILLLPLHTGSNGLTIIEATHVL-LVEPILNPA 1627 Query: 143 EHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRT 186 Q I R+ + G + V+ + + TI+E + L+T Sbjct: 1628 HELQAIGRV-----HRIGQTKPTIVHRFLIKATIEERMQAMLKT 1666 >gi|225448562|ref|XP_002273775.1| PREDICTED: hypothetical protein [Vitis vinifera] Length = 1306 Score = 67.3 bits (163), Expect = 1e-09, Method: Composition-based stats. Identities = 39/194 (20%), Positives = 73/194 (37%), Gaps = 23/194 (11%) Query: 7 FQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKA 66 F RE +L+ + SK L L N + E+ + I I +K Sbjct: 1032 FSREELLELKKHKDD-VKKGSKVKFVLSLVNRCIIRKEKILIFCHNISPINLFVDIFDKL 1090 Query: 67 ----NAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHG 122 ++V DL F +GR +D+ G +L A +C G Sbjct: 1091 YKWKKGEDVLV---LQGDLE----LFERGRVMDQFEEP-----GGASKVLLASITACAEG 1138 Query: 123 LNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQ 182 ++L + ++ W+ + +Q + R + G +R V+VY L+ +T++E Sbjct: 1139 ISLT-AASRVILLDTEWNPSKQKQAVAR-----AFRPGQERVVYVYQLLETDTLEEEKNS 1192 Query: 183 RLRTKSTIQDLLLN 196 R K + ++ + Sbjct: 1193 RTNWKEWVSSMIFS 1206 >gi|255293151|dbj|BAH90243.1| DEAD/DEAH box helicase-like protein [uncultured bacterium] Length = 1170 Score = 67.3 bits (163), Expect = 1e-09, Method: Composition-based stats. Identities = 37/185 (20%), Positives = 73/185 (39%), Gaps = 21/185 (11%) Query: 17 GENIEAFNSASKTVKCLQ-LANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAY 75 E +E +T+K L+ +A G + + W +++ L I N +I+ Sbjct: 456 AETVEQLALEVETLKGLESMALGVLRSGVDTKWSQLNRILDDDLM-IDAAGNRRKLIIFT 514 Query: 76 HFNSDLARLQ-------------KAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHG 122 L L + G + ++ ++ + + K L+ + G G Sbjct: 515 EPKDTLHYLLDKVRARLGNTQAVEVIHGGVSREERRKVVERFMQDKDMLVLIANDAAGEG 574 Query: 123 LNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQ 182 +NLQ G +++V + L W+ + +Q RI + G ++ L+A +T + V Sbjct: 575 VNLQRG-HLMVNYDLPWNPNKIEQRFGRI-----HRIGQTEVCHLWNLVAADTREGEVYA 628 Query: 183 RLRTK 187 RL K Sbjct: 629 RLLEK 633 >gi|239817547|ref|YP_002946457.1| SNF2-related protein [Variovorax paradoxus S110] gi|239804124|gb|ACS21191.1| SNF2-related protein [Variovorax paradoxus S110] Length = 1291 Score = 67.3 bits (163), Expect = 1e-09, Method: Composition-based stats. Identities = 31/170 (18%), Positives = 66/170 (38%), Gaps = 24/170 (14%) Query: 44 EEKHWKEVHDEKIKALEV---IIEKANAAPII---------VAYHFNSDLARLQKAFPQG 91 + + K++ L ++E A I+ Y+F + ++ G Sbjct: 945 SGRDVHLRNSPKLQWLLERLVVVEAAQEKAIVFTELRETQAALYYFLKETFGIRPFIING 1004 Query: 92 RTLDKDPCTIQEWNEGK-IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 + + I +++ ++ + G GLN+ N + F+ W+ + Q +R Sbjct: 1005 DSQGRQG-YIDKFSAKSGFDVIILSTLAAGAGLNVT-AANHVFHFTRAWNPSKESQATDR 1062 Query: 151 IGVTRQRQAGFKRAVFVYY--LIAQN--TIDELVLQRLRTKSTIQDLLLN 196 + G +R VFVY ++A N T + + Q L+ K+ + L+ Sbjct: 1063 -----AFRIGQERDVFVYCPTVVADNFRTFELRLDQLLKRKAGLAGSTLD 1107 >gi|242018235|ref|XP_002429584.1| conserved hypothetical protein [Pediculus humanus corporis] gi|212514551|gb|EEB16846.1| conserved hypothetical protein [Pediculus humanus corporis] Length = 657 Score = 67.3 bits (163), Expect = 1e-09, Method: Composition-based stats. Identities = 26/148 (17%), Positives = 56/148 (37%), Gaps = 19/148 (12%) Query: 53 DEKIKALEVII--EKANAAPIIVAYHFNSDLARLQKAFPQGRT-----------LDKDPC 99 + K+ A+ I + N+ +V H ++ L + + ++ Sbjct: 435 NAKLSAVCEYIGDKLENSNKFLVFAHHSNVLDGICDLLNNKKVDYIRIDGTVSSENRQIK 494 Query: 100 TIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQA 159 + + + + GL L +++F L+W+ E Q +R + Sbjct: 495 CQEFQSNPNCKVAVLSLKAANTGLTLTE-AQLVIFAELYWNPGELIQAEDR-----AHRI 548 Query: 160 GFKRAVFVYYLIAQNTIDELVLQRLRTK 187 G + +V V YLIA+ T D+ + ++ K Sbjct: 549 GQRDSVLVEYLIAKGTADDHLWSLVQLK 576 >gi|15241352|ref|NP_197542.1| CHR42 (chromatin remodeling 42); ATP binding / DNA binding / helicase/ nucleic acid binding [Arabidopsis thaliana] gi|332005458|gb|AED92841.1| chromatin remodeling 42 [Arabidopsis thaliana] Length = 1261 Score = 67.3 bits (163), Expect = 1e-09, Method: Composition-based stats. Identities = 28/169 (16%), Positives = 68/169 (40%), Gaps = 25/169 (14%) Query: 46 KHWKEVHDEKIKALEVIIEKANAAPIIVAYH-------FNSDLARLQKAFPQGRTLDKDP 98 KH + + + L +I I++ H F + + + +GR + Sbjct: 1056 KHDAKKGSKVMFVLNLIFRVVKREKILIFCHNIAPIRMFTELFENIFR-WQRGREILTLT 1114 Query: 99 CTIQEWNEGKI-----------PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQM 147 ++ + G++ +L A +C G++L + ++ W+ + +Q Sbjct: 1115 GDLELFERGRVIDKFEEPGNPSRVLLASITACAEGISLT-AASRVIMLDSEWNPSKTKQA 1173 Query: 148 IERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 I R + G ++ V+VY L+++ T++E +R K + ++ + Sbjct: 1174 IAR-----AFRPGQQKVVYVYQLLSRGTLEEDKYRRTTWKEWVSCMIFS 1217 >gi|320170024|gb|EFW46923.1| conserved hypothetical protein [Capsaspora owczarzaki ATCC 30864] Length = 2080 Score = 67.3 bits (163), Expect = 1e-09, Method: Composition-based stats. Identities = 28/147 (19%), Positives = 50/147 (34%), Gaps = 15/147 (10%) Query: 52 HDEKIKALEV-IIE---KANAAPIIVAYHFNSDLARLQKAF----PQGRTLDKDPCTIQE 103 KI AL +IE + +V + L+R+ +A T+ Sbjct: 1913 SSTKIDALIRYLIELERQNPGTKSVVFSQWGHVLSRVGEALQLQGIGFTTIQTGKDAASL 1972 Query: 104 WN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFK 162 ++ K+ + H GL L + + Q I R+ + G Sbjct: 1973 FHSNPKVTVFLLHSRHKSSGLTL-VAATHVFLMDPIINPAVELQAINRV-----HRIGQT 2026 Query: 163 RAVFVYYLIAQNTIDELVLQRLRTKST 189 V+ I +NTI++ VL+ + T Sbjct: 2027 AETHVHRFIVENTIEQQVLRLAVGQDT 2053 >gi|328876957|gb|EGG25320.1| SNF2-related domain-containing protein [Dictyostelium fasciculatum] Length = 1814 Score = 67.3 bits (163), Expect = 1e-09, Method: Composition-based stats. Identities = 27/141 (19%), Positives = 58/141 (41%), Gaps = 16/141 (11%) Query: 62 IIEKANAAPIIVAYHFNSDLARLQKAFPQ-GRTLDKDPCTIQEWN--------EGKIPLL 112 I +K +I+ ++ L + +A + G ++ Q++ + I +L Sbjct: 1658 IFDKDPLQKVILFSQWSEVLEIVSRALAENGIVFERGDKGGQQFQASVALFRKDPTIQVL 1717 Query: 113 FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIA 172 +GLN+ ++ + + Q I RI + G ++ +++ I Sbjct: 1718 LLPTKRGANGLNIIEATHVFI-VEPLLNPAVEAQAINRI-----HRFGQQKECYIHRFII 1771 Query: 173 QNTIDELVLQRLRTKSTIQDL 193 +NTI+E ++Q LR K+ Q Sbjct: 1772 KNTIEEKIVQ-LREKNNNQSD 1791 >gi|164658682|ref|XP_001730466.1| hypothetical protein MGL_2262 [Malassezia globosa CBS 7966] gi|159104362|gb|EDP43252.1| hypothetical protein MGL_2262 [Malassezia globosa CBS 7966] Length = 1014 Score = 67.3 bits (163), Expect = 1e-09, Method: Composition-based stats. Identities = 37/182 (20%), Positives = 61/182 (33%), Gaps = 47/182 (25%) Query: 53 DEKIKALEV-IIEKANAAPI---IVAYHFNSDLARLQKAFPQ---------GRTLDKD-P 98 K+ AL + E + P ++ F L +Q Q GRT K+ Sbjct: 815 STKLNALMQQLAELTKSDPTCKGVIFSQFTGFLNLIQAHLVQRQYAFVRLDGRTPQKERE 874 Query: 99 CTIQEW-NEGKIPLLFAHPASCGHGLNLQ-----------YGGNILVFFSLWWD------ 140 ++ + NE L + G GLN G + + L Sbjct: 875 HVLRTFANEPGPFFLLMSLRAGGVGLNCTFLCACTNTSSDSGESRVAHGLLVESKHVCCK 934 Query: 141 ----------LEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 Q I+R+ + G RAV V+ L+ +TI++ +L+ R K + Sbjct: 935 KHETKKTRLTPVREDQAIDRV-----HRLGQSRAVTVHRLLVNDTIEDRILEIQRHKKQL 989 Query: 191 QD 192 D Sbjct: 990 VD 991 >gi|212638757|ref|YP_002315277.1| Superfamily II DNA/RNA helicase, SNF2 family [Anoxybacillus flavithermus WK1] gi|212560237|gb|ACJ33292.1| Superfamily II DNA/RNA helicase, SNF2 family [Anoxybacillus flavithermus WK1] Length = 547 Score = 67.3 bits (163), Expect = 1e-09, Method: Composition-based stats. Identities = 35/173 (20%), Positives = 68/173 (39%), Gaps = 22/173 (12%) Query: 33 LQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQ-- 90 L+ GA+ +K ALE +I+ N +IV + + LQ F Q Sbjct: 333 LETTIGALLQKMNDITDHTKAKK--ALE-LIQTINDK-VIVFTEYRATQLYLQWFFKQHG 388 Query: 91 --------GRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLE 142 G K + + + + G G+NLQ+ + ++ + L W+ Sbjct: 389 ISSVPFRGGFKRSKKDWMKELFQHRAQ--VLIATEAGGEGINLQF-CHHVINYDLPWNPM 445 Query: 143 EHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 +Q I R+ + G + V +Y + +NT++E + L K + + ++ Sbjct: 446 RLEQRIGRV-----HRLGQMKDVHIYNFVVRNTVEEHMFTLLYEKIRLFERVV 493 >gi|134114115|ref|XP_774305.1| hypothetical protein CNBG2860 [Cryptococcus neoformans var. neoformans B-3501A] gi|50256940|gb|EAL19658.1| hypothetical protein CNBG2860 [Cryptococcus neoformans var. neoformans B-3501A] Length = 1163 Score = 67.3 bits (163), Expect = 1e-09, Method: Composition-based stats. Identities = 18/87 (20%), Positives = 33/87 (37%), Gaps = 6/87 (6%) Query: 97 DPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 + + + + GLNL N ++F W L+ Q I+R+ Sbjct: 959 RRLALDYFETPGVRVCLMDLKLAARGLNL-VSANRVIFLGPVWSLDVQAQAIKRV----- 1012 Query: 157 RQAGFKRAVFVYYLIAQNTIDELVLQR 183 + G R V L+ + T +E + +R Sbjct: 1013 HRIGQTRPTLVQILVTEGTFEEDIARR 1039 >gi|297721831|ref|NP_001173279.1| Os03g0165266 [Oryza sativa Japonica Group] gi|255674231|dbj|BAH92007.1| Os03g0165266 [Oryza sativa Japonica Group] Length = 1078 Score = 67.3 bits (163), Expect = 1e-09, Method: Composition-based stats. Identities = 23/133 (17%), Positives = 48/133 (36%), Gaps = 22/133 (16%) Query: 63 IEKANAAPIIVAYHFNSDLARLQKAFPQ---------------GRTLDKDPCTIQEWNE- 106 + +A ++V + L L+K + G T D+ + +N Sbjct: 891 LSEATGGKVLVFSQYVRSLIFLEKLVSRMKGWKSEVHIFRVTGGSTQDQREQAVHRFNNS 950 Query: 107 GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVF 166 + F +CG G++L I++ + R + R + G + V+ Sbjct: 951 PDARVFFGSIKACGEGISLVGASRIVILD------VHENPSVMRQAIGRAYRPGQSKMVY 1004 Query: 167 VYYLIAQNTIDEL 179 Y L+A ++ +E Sbjct: 1005 CYRLVAADSPEED 1017 >gi|159470465|ref|XP_001693380.1| predicted protein [Chlamydomonas reinhardtii] gi|158277638|gb|EDP03406.1| predicted protein [Chlamydomonas reinhardtii] Length = 594 Score = 66.9 bits (162), Expect = 1e-09, Method: Composition-based stats. Identities = 25/133 (18%), Positives = 53/133 (39%), Gaps = 13/133 (9%) Query: 59 LEVIIEKANAAPIIVA---YHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAH 115 E ++E + ++ R+ P D++ T + E + + Sbjct: 437 CEDLLEGEDPPKFLLFGEGRKLRFKYIRIDGDTPGE---DRNRLTQKFQEEEDVKVALLS 493 Query: 116 PASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA-VFVYYLIAQN 174 + G GL +++VF L W + QQ +R + G V ++YL+ + Sbjct: 494 IKAAGVGLTFTRS-SLVVFSELSWIPGDIQQAEDRC-----HRIGQAATSVNIHYLLVRG 547 Query: 175 TIDELVLQRLRTK 187 ++DE++ L++K Sbjct: 548 SVDEIMWDCLQSK 560 >gi|310800231|gb|EFQ35124.1| WD domain-containing protein [Glomerella graminicola M1.001] Length = 1215 Score = 66.9 bits (162), Expect = 1e-09, Method: Composition-based stats. Identities = 18/102 (17%), Positives = 40/102 (39%), Gaps = 7/102 (6%) Query: 95 DKDPCTIQEW-NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGV 153 + ++ + N+ I +L + GLNL + W+ Q + RI Sbjct: 633 KERQRVVERFRNDPSIRVLLLTLSCGAVGLNLT-AASRAYLMEPNWNPTLQDQALARI-- 689 Query: 154 TRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 + G + V +++ +E+V++ + K + +LL Sbjct: 690 ---HRMGQENEVTTIQFYIRDSFEEVVVKNQKLKRELAGILL 728 >gi|119568224|gb|EAW47839.1| SNF2 histone linker PHD RING helicase, isoform CRA_d [Homo sapiens] Length = 1716 Score = 66.9 bits (162), Expect = 1e-09, Method: Composition-based stats. Identities = 29/164 (17%), Positives = 59/164 (35%), Gaps = 18/164 (10%) Query: 35 LANGAVYYDEEKHWKEVHDEKIKA----LEVIIEKANAAPIIVAYHFNSDLARLQKA--- 87 + +E+ K H K++A L I + A +V + L + KA Sbjct: 1500 FTSEKANQEEDIPVKGSHSTKVEAVVRTLMKIQLRDPGAKALVFSTWQDVLDIISKALTD 1559 Query: 88 ----FPQGRTLDKDPCTIQEW-NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLE 142 F Q + + + + +I +L + +GL + ++L + Sbjct: 1560 NNMEFAQISRVKTFQENLSAFKRDPQINILLLPLHTGSNGLTIIEATHVL-LVEPILNPA 1618 Query: 143 EHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRT 186 Q I R+ + G + V+ + + TI+E + L+T Sbjct: 1619 HELQAIGRV-----HRIGQTKPTIVHRFLIKATIEERMQAMLKT 1657 >gi|238597268|ref|XP_002394280.1| hypothetical protein MPER_05857 [Moniliophthora perniciosa FA553] gi|215463060|gb|EEB95210.1| hypothetical protein MPER_05857 [Moniliophthora perniciosa FA553] Length = 235 Score = 66.9 bits (162), Expect = 1e-09, Method: Composition-based stats. Identities = 17/77 (22%), Positives = 37/77 (48%), Gaps = 5/77 (6%) Query: 129 GNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKS 188 + ++ F W+ Q + R + G K V VY ++++T++E VL+R + K Sbjct: 26 ADTVIIFDSDWNPHNDLQAMAR-----AHRIGQKSHVSVYRFVSKDTMEEDVLERAKKKM 80 Query: 189 TIQDLLLNALKKETIHV 205 ++ ++N + H+ Sbjct: 81 VLEYAIINQMDTSQAHL 97 >gi|297824995|ref|XP_002880380.1| hypothetical protein ARALYDRAFT_481010 [Arabidopsis lyrata subsp. lyrata] gi|297326219|gb|EFH56639.1| hypothetical protein ARALYDRAFT_481010 [Arabidopsis lyrata subsp. lyrata] Length = 800 Score = 66.9 bits (162), Expect = 1e-09, Method: Composition-based stats. Identities = 28/154 (18%), Positives = 53/154 (34%), Gaps = 23/154 (14%) Query: 59 LEVIIEKANAAPIIVAYHFN---SDLARLQKAFPQGR-------TLDKDPCTIQEW---- 104 L + E ++V + L RL + R +EW Sbjct: 614 LLALCEST-GEKLLVFSQYIVPIKTLERLMSSMKGWRLGKEMFTITGDSSNEQREWSMER 672 Query: 105 --NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFK 162 N + + F +CG G++L G + ++ + + QQ + R + G K Sbjct: 673 FNNSPEAKVFFGSIKACGEGISL-VGASRVLILDVHLNPSVTQQAVAR-----AYRPGQK 726 Query: 163 RAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 R V+ Y L+A + +E + K + + Sbjct: 727 RKVYAYKLVAAESPEEENYETCTRKEMMSKMWFE 760 >gi|255291967|dbj|BAH90453.1| helicase-like protein [uncultured bacterium] gi|255292161|dbj|BAH89287.1| helicase-like protein [uncultured bacterium] gi|255293197|dbj|BAH90288.1| ATP-dependent RNA helicase [uncultured bacterium] Length = 767 Score = 66.9 bits (162), Expect = 1e-09, Method: Composition-based stats. Identities = 37/185 (20%), Positives = 73/185 (39%), Gaps = 21/185 (11%) Query: 17 GENIEAFNSASKTVKCLQ-LANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAY 75 E +E +T+K L+ +A G + + W +++ L I N +I+ Sbjct: 456 AETVEQLALEVETLKGLESMALGVLRSGVDTKWSQLNRILDDDLM-IDAAGNRRKLIIFT 514 Query: 76 HFNSDLARLQ-------------KAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHG 122 L L + G + ++ ++ + + K L+ + G G Sbjct: 515 EPKDTLHYLLDKVRARLGNTQAVEVIHGGVSREERRKVVERFMQDKDMLVLIANDAAGEG 574 Query: 123 LNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQ 182 +NLQ G +++V + L W+ + +Q RI + G ++ L+A +T + V Sbjct: 575 VNLQRG-HLMVNYDLPWNPNKIEQRFGRI-----HRIGQTEVCHLWNLVAADTREGEVYA 628 Query: 183 RLRTK 187 RL K Sbjct: 629 RLLEK 633 >gi|258567350|ref|XP_002584419.1| conserved hypothetical protein [Uncinocarpus reesii 1704] gi|237905865|gb|EEP80266.1| conserved hypothetical protein [Uncinocarpus reesii 1704] Length = 1216 Score = 66.9 bits (162), Expect = 2e-09, Method: Composition-based stats. Identities = 31/177 (17%), Positives = 63/177 (35%), Gaps = 28/177 (15%) Query: 44 EEKHWKEVHDEKIKALEV-IIEKANAAPIIVAYHFNSD-------LARL-QKAFPQGRTL 94 K+ L ++E II+ Y N++ L L + TL Sbjct: 907 ANTKIVATASAKLSYLLDRVLEFQETEKIIIFYENNNNAFWVAEGLEILGVEFRIYASTL 966 Query: 95 D---KDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERI 151 K N ++ +L HGL++ + + + WD Q I+R Sbjct: 967 KPNLKSEYLSMFNNSEEVRVLLMDLRQASHGLHV-ASASRIFIINPIWDPNIESQAIKR- 1024 Query: 152 GVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLR----------TKSTIQDLLLNAL 198 + R V+V L+ +NT+++ +L+R + + + D ++++ Sbjct: 1025 ----AHRISQTRPVYVETLVLRNTLEDKMLRRRKQMSNAEMQHAERDLLDDATMSSI 1077 >gi|255559547|ref|XP_002520793.1| ATP-dependent helicase, putative [Ricinus communis] gi|223539924|gb|EEF41502.1| ATP-dependent helicase, putative [Ricinus communis] Length = 1246 Score = 66.9 bits (162), Expect = 2e-09, Method: Composition-based stats. Identities = 31/144 (21%), Positives = 59/144 (40%), Gaps = 22/144 (15%) Query: 55 KIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIP--LL 112 ++ E + I+V DL F +GR +DK + E P +L Sbjct: 1079 FVELFENVFRWQRGREIMV---LTGDLE----LFERGRVMDK-------FEEPGSPSRVL 1124 Query: 113 FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIA 172 A +C G++L + ++ W+ + +Q I R + G ++ V+VY L+A Sbjct: 1125 LASITACAEGISLT-AASRVILLDSEWNPSKTKQAIAR-----AFRPGQQKVVYVYQLLA 1178 Query: 173 QNTIDELVLQRLRTKSTIQDLLLN 196 T++E R K + ++ + Sbjct: 1179 TGTLEEDKYSRTTWKEWVSSMIFS 1202 >gi|147677193|ref|YP_001211408.1| hypothetical protein PTH_0858 [Pelotomaculum thermopropionicum SI] gi|146273290|dbj|BAF59039.1| hypothetical protein [Pelotomaculum thermopropionicum SI] Length = 1114 Score = 66.9 bits (162), Expect = 2e-09, Method: Composition-based stats. Identities = 37/193 (19%), Positives = 76/193 (39%), Gaps = 38/193 (19%) Query: 10 ELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKA--- 66 E +L+ E IE ++ K ++ K+ + K+ L +IE+ Sbjct: 434 ETLEELR-EEIEKLDALVLLAKEVE--------------KQEIETKLNRLREVIEEERLR 478 Query: 67 -NAAPIIVAYHFNSDLARLQKAFPQ-----------GRTLDKDPCTIQEWNEGKIPLLFA 114 +++ L L + + G +D E+ + ++ A Sbjct: 479 ETGTKLLIFTESKDTLEYLAEKIGKKWGYSVTTVHGGMGMDARIRAEHEFKN-RAQVMVA 537 Query: 115 HPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQN 174 + G G+NLQ+ ++V + + W+ +Q + RI + G K V +Y L+A + Sbjct: 538 -TEAAGEGINLQF-CWLMVNYDIPWNPNRLEQRMGRI-----HRYGQKSEVHIYNLVAAD 590 Query: 175 TIDELVLQRLRTK 187 T + +L++L K Sbjct: 591 TREGRILEKLFEK 603 >gi|67523009|ref|XP_659565.1| hypothetical protein AN1961.2 [Aspergillus nidulans FGSC A4] gi|40745970|gb|EAA65126.1| hypothetical protein AN1961.2 [Aspergillus nidulans FGSC A4] gi|259487320|tpe|CBF85901.1| TPA: SNF2 family helicase, putative (AFU_orthologue; AFUA_4G10830) [Aspergillus nidulans FGSC A4] Length = 1502 Score = 66.9 bits (162), Expect = 2e-09, Method: Composition-based stats. Identities = 31/164 (18%), Positives = 64/164 (39%), Gaps = 24/164 (14%) Query: 49 KEVHDEKI-KALEVIIEKANAAPIIVAY-------HFNSDLA------RLQKAFPQGRTL 94 K+ L+ + E + A II+ Y L R+ + Sbjct: 859 IATASAKLTYLLDQVQEHSKAEKIIIFYDNNNSAYWIAEGLELLGVDFRIYANTLKPTLR 918 Query: 95 DKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 ++ +E+ ++ +L HGL++ + + + W Q I+R Sbjct: 919 EEYLILFREFE--QVRVLLMDLRQASHGLHIAQ-ASRVYIVNPIWQPNIESQAIKR---- 971 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTI--QDLLLN 196 + G R VFV L+ ++T+++ +LQR + + + Q+ LL+ Sbjct: 972 -AHRIGQTRPVFVETLVLRDTLEDKILQRRKAMADVEIQNDLLD 1014 >gi|12859719|dbj|BAB31751.1| unnamed protein product [Mus musculus] Length = 350 Score = 66.9 bits (162), Expect = 2e-09, Method: Composition-based stats. Identities = 19/53 (35%), Positives = 31/53 (58%), Gaps = 2/53 (3%) Query: 154 TRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA--LKKETIH 204 R + G + V VY LI + TI+E +LQR + KS IQ ++++ K +T+ Sbjct: 2 DRAHRLGQTKQVTVYRLICKGTIEERILQRAKEKSEIQRMVISGGNFKPDTLK 54 >gi|7023894|dbj|BAA92122.1| unnamed protein product [Homo sapiens] Length = 350 Score = 66.9 bits (162), Expect = 2e-09, Method: Composition-based stats. Identities = 19/53 (35%), Positives = 31/53 (58%), Gaps = 2/53 (3%) Query: 154 TRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA--LKKETIH 204 R + G + V VY LI + TI+E +LQR + KS IQ ++++ K +T+ Sbjct: 2 DRAHRLGQTKQVTVYRLICKGTIEERILQRAKEKSEIQRMVISGGNFKPDTLK 54 >gi|328848391|gb|EGF97611.1| hypothetical protein MELLADRAFT_84825 [Melampsora larici-populina 98AG31] Length = 244 Score = 66.9 bits (162), Expect = 2e-09, Method: Composition-based stats. Identities = 17/88 (19%), Positives = 37/88 (42%), Gaps = 6/88 (6%) Query: 93 TLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIG 152 T ++ + N I + G GLN+ + + W+ + QQ I+R+ Sbjct: 88 THERTCQLNRFKNNNNIEAFIVSIEAGGVGLNMTC-ADEVYLMDAHWNPQIVQQAIDRL- 145 Query: 153 VTRQRQAGFKRAVFVYYLIAQNTIDELV 180 + G V VY+++A ++++ + Sbjct: 146 ----HRIGQTHPVKVYHVVAGQSVEQHL 169 >gi|320039594|gb|EFW21528.1| SNF2 family helicase [Coccidioides posadasii str. Silveira] Length = 1271 Score = 66.9 bits (162), Expect = 2e-09, Method: Composition-based stats. Identities = 29/180 (16%), Positives = 66/180 (36%), Gaps = 34/180 (18%) Query: 47 HWKEVHDEKIKALEV-IIEKANAAPIIVAYHFNSD-------------LARLQKAFPQGR 92 K+ L + E + II+ Y N++ R+ + + + Sbjct: 917 QVVATTSAKLSYLLDRVFELQSEEKIIIFYENNNNAFWVAEGLEMLGVEFRIYASTLKPK 976 Query: 93 TLDKDPCTIQEWNEGK-IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERI 151 + +N + + +L HGL+L + + + WD Q I+R Sbjct: 977 LK---AEYLALFNNSECVRVLLMDLRQASHGLHL-ASASRIFIINPIWDPNIESQAIKR- 1031 Query: 152 GVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLR----------TKSTIQDLLLNALKKE 201 + + V+V L+ ++T+++ +L+R + K + D ++++ KE Sbjct: 1032 ----AHRISQMKPVYVETLVLKDTLEDKMLRRRKQMTNIEMQHAEKDLLDDRTMSSIIKE 1087 >gi|303311435|ref|XP_003065729.1| SNF2 family N-terminal domain containing protein [Coccidioides posadasii C735 delta SOWgp] gi|240105391|gb|EER23584.1| SNF2 family N-terminal domain containing protein [Coccidioides posadasii C735 delta SOWgp] Length = 1271 Score = 66.9 bits (162), Expect = 2e-09, Method: Composition-based stats. Identities = 29/180 (16%), Positives = 66/180 (36%), Gaps = 34/180 (18%) Query: 47 HWKEVHDEKIKALEV-IIEKANAAPIIVAYHFNSD-------------LARLQKAFPQGR 92 K+ L + E + II+ Y N++ R+ + + + Sbjct: 917 QVVATTSAKLSYLLDRVFELQSEEKIIIFYENNNNAFWVAEGLEMLGVEFRIYASTLKPK 976 Query: 93 TLDKDPCTIQEWNEGK-IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERI 151 + +N + + +L HGL+L + + + WD Q I+R Sbjct: 977 LK---AEYLALFNNSECVRVLLMDLRQASHGLHL-ASASRIFIINPIWDPNIESQAIKR- 1031 Query: 152 GVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLR----------TKSTIQDLLLNALKKE 201 + + V+V L+ ++T+++ +L+R + K + D ++++ KE Sbjct: 1032 ----AHRISQMKPVYVETLVLKDTLEDKMLRRRKQMTNIEMQHAEKDLLDDRTMSSIIKE 1087 >gi|154338293|ref|XP_001565371.1| helicase-like protein [Leishmania braziliensis MHOM/BR/75/M2904] gi|134062420|emb|CAM42281.1| putative helicase-like protein [Leishmania braziliensis MHOM/BR/75/M2904] Length = 1398 Score = 66.9 bits (162), Expect = 2e-09, Method: Composition-based stats. Identities = 31/204 (15%), Positives = 72/204 (35%), Gaps = 15/204 (7%) Query: 9 RELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANA 68 EL K + ++L A+ DE+ + + + LE +I K N Sbjct: 906 EELCVPPSPNYTPLLEDGVKLLVAIKLVVAAMARDEKVLLFSLSTQLLTFLERMIAKVNI 965 Query: 69 A---PII--VAYHFNSDLARLQKAFPQGRT-LDKDPCTIQEWNEGKIP-LLFAHPASCGH 121 P++ + ++ G + + ++ P L + G Sbjct: 966 EWCGPVLGSQQQQYPKSPRPIRYCRLDGSHSAAQRAAMLDNFDRPDGPDLFLLSMKAGGV 1025 Query: 122 GLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVL 181 G+ + ++ ++ + QQ I R + G R V+VY L+ T++ + Sbjct: 1026 GITVT-AATRVILVDTSFNPADDQQAIGR-----AYRYGQTRPVYVYRLMCYPTLEYSIF 1079 Query: 182 QRLRTKSTIQDLLLN--ALKKETI 203 + K + ++ ++K++ + Sbjct: 1080 AQKLAKEWLFKTVVEESSVKRDGL 1103 >gi|325115673|emb|CBZ51228.1| putative SNF2 family N-terminal domain-containing protein [Neospora caninum Liverpool] Length = 1837 Score = 66.9 bits (162), Expect = 2e-09, Method: Composition-based stats. Identities = 20/87 (22%), Positives = 40/87 (45%), Gaps = 7/87 (8%) Query: 111 LLFAHPASCGHGLNLQYGGNILVFF--SLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVY 168 + + G+GL L + ++ VF + + +Q I R+ + G + V V Sbjct: 581 VFLVSVRAGGYGLTLSHCASVCVFLEGGGDGNPQIERQAIARL-----YRQGQTKKVKVI 635 Query: 169 YLIAQNTIDELVLQRLRTKSTIQDLLL 195 LI ++T++E++ R R K + +L Sbjct: 636 RLITKSTVEEVMYWRGRQKLKLASDVL 662 >gi|297679363|ref|XP_002817506.1| PREDICTED: e3 ubiquitin-protein ligase SHPRH-like isoform 2 [Pongo abelii] Length = 1659 Score = 66.9 bits (162), Expect = 2e-09, Method: Composition-based stats. Identities = 29/164 (17%), Positives = 59/164 (35%), Gaps = 18/164 (10%) Query: 35 LANGAVYYDEEKHWKEVHDEKIKA----LEVIIEKANAAPIIVAYHFNSDLARLQKA--- 87 + +E+ K H K++A L I + A +V + L + KA Sbjct: 1495 FTSEKANQEEDIPVKGSHSTKVEAVVRTLMKIQLRDPGAKALVFSTWQDVLDIISKALTD 1554 Query: 88 ----FPQGRTLDKDPCTIQEW-NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLE 142 F Q + + + + +I +L + +GL + ++L + Sbjct: 1555 NNMEFAQISRVKTFQENLSAFKRDPQINILLLPLHTGSNGLTIIEATHVL-LVEPILNPA 1613 Query: 143 EHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRT 186 Q I R+ + G + V+ + + TI+E + L+T Sbjct: 1614 HELQAIGRV-----HRIGQTKPTIVHRFLIKATIEERMQAMLKT 1652 >gi|114609674|ref|XP_001172938.1| PREDICTED: SNF2 histone linker PHD RING helicase isoform 1 [Pan troglodytes] gi|114609676|ref|XP_001172949.1| PREDICTED: SNF2 histone linker PHD RING helicase isoform 2 [Pan troglodytes] Length = 1659 Score = 66.9 bits (162), Expect = 2e-09, Method: Composition-based stats. Identities = 29/168 (17%), Positives = 60/168 (35%), Gaps = 18/168 (10%) Query: 35 LANGAVYYDEEKHWKEVHDEKIKA----LEVIIEKANAAPIIVAYHFNSDLARLQKA--- 87 + +E+ K H K++A L I + A +V + L + KA Sbjct: 1495 FTSEKANQEEDIPVKGSHSTKVEAVVRTLMKIQLRDPGAKALVFSTWQDVLDIISKALTD 1554 Query: 88 ----FPQGRTLDKDPCTIQEW-NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLE 142 F Q + + + + +I +L + +GL + ++L + Sbjct: 1555 NNMEFAQISRVKTFQENLSAFKRDPQINILLLPLHTGSNGLTIIEATHVL-LVEPILNPA 1613 Query: 143 EHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 Q I R+ + G + V+ + + TI+E + L+T + Sbjct: 1614 HELQAIGRV-----HRIGQTKPTIVHRFLIKATIEERMQAMLKTAANS 1656 >gi|149409031|ref|XP_001506895.1| PREDICTED: similar to SNF2 histone linker PHD RING helicase [Ornithorhynchus anatinus] Length = 1042 Score = 66.9 bits (162), Expect = 2e-09, Method: Composition-based stats. Identities = 31/164 (18%), Positives = 59/164 (35%), Gaps = 18/164 (10%) Query: 35 LANGAVYYDEEKHWKEVHDEKIKA----LEVIIEKANAAPIIVAYHFNSDLARLQKAFPQ 90 +++ K H K++A L+ I K A +V + L + KA Sbjct: 850 FTAETANQEDDIPVKGSHSTKVEAVVRTLKRIQFKCPGAKSLVFSTWQDVLDIISKALYD 909 Query: 91 GRTLDKDPCTIQEWNE--------GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLE 142 + I ++ E KI +L + +GLN+ ++L + Sbjct: 910 NNMVFAQINGIHKFQENLSAFKYDPKINILLLPLHTGSNGLNIIEATHVL-LVEPILNPA 968 Query: 143 EHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRT 186 Q I R+ + G + V+ + + TI+E + L+T Sbjct: 969 HELQAIGRV-----HRIGQTKPTIVHRFLIKTTIEERMQTMLKT 1007 >gi|224054730|ref|XP_002191300.1| PREDICTED: similar to SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a-like 1 [Taeniopygia guttata] Length = 963 Score = 66.9 bits (162), Expect = 2e-09, Method: Composition-based stats. Identities = 27/138 (19%), Positives = 54/138 (39%), Gaps = 18/138 (13%) Query: 61 VIIEKANAAPIIVAYHFNSDLA---------RLQKAFPQGRTLDKDPCTI-QEWN-EGKI 109 ++E N +V H L ++ G T + ++ Q++ K Sbjct: 742 ELLESGNNK-FLVFAHHKIMLDAVAAELKKKHIEHIRIDGSTSSAERQSLCQKFQLAEKH 800 Query: 110 PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYY 169 + + GL L +++VF L+W+ Q +R + G +V V+Y Sbjct: 801 AVAVLSLTAANMGLTL-CAADLVVFAELFWNPGILIQAEDR-----AHRIGQTSSVNVHY 854 Query: 170 LIAQNTIDELVLQRLRTK 187 L+A+ T D+ + ++ K Sbjct: 855 LVAKGTADDYLWPMIQEK 872 >gi|109072462|ref|XP_001086276.1| PREDICTED: e3 ubiquitin-protein ligase SHPRH-like isoform 1 [Macaca mulatta] Length = 1659 Score = 66.9 bits (162), Expect = 2e-09, Method: Composition-based stats. Identities = 29/164 (17%), Positives = 59/164 (35%), Gaps = 18/164 (10%) Query: 35 LANGAVYYDEEKHWKEVHDEKIKA----LEVIIEKANAAPIIVAYHFNSDLARLQKA--- 87 + +E+ K H K++A L I + A +V + L + KA Sbjct: 1495 FTSEKANQEEDIPVKGSHSTKVEAVVRTLMKIQLRDPGAKALVFSTWQDVLDIISKALTD 1554 Query: 88 ----FPQGRTLDKDPCTIQEW-NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLE 142 F Q + + + + +I +L + +GL + ++L + Sbjct: 1555 NNMEFAQISRVKTFQENLSAFKRDPQINILLLPLHTGSNGLTIIEATHVL-LVEPILNPA 1613 Query: 143 EHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRT 186 Q I R+ + G + V+ + + TI+E + L+T Sbjct: 1614 HELQAIGRV-----HRIGQTKPTIVHRFLIKATIEERMQAMLKT 1652 >gi|328854834|gb|EGG03964.1| hypothetical protein MELLADRAFT_89789 [Melampsora larici-populina 98AG31] gi|328855578|gb|EGG04704.1| hypothetical protein MELLADRAFT_88629 [Melampsora larici-populina 98AG31] gi|328856061|gb|EGG05184.1| hypothetical protein MELLADRAFT_88297 [Melampsora larici-populina 98AG31] gi|328859055|gb|EGG08165.1| hypothetical protein MELLADRAFT_84940 [Melampsora larici-populina 98AG31] Length = 244 Score = 66.9 bits (162), Expect = 2e-09, Method: Composition-based stats. Identities = 17/88 (19%), Positives = 38/88 (43%), Gaps = 6/88 (6%) Query: 93 TLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIG 152 T ++ + N+ I + G GLN+ + + W+ + QQ I+R+ Sbjct: 88 THERTCQLNRFKNDNNIEAFIVSIEAGGVGLNMTC-ADEVYLMDAHWNPQIVQQAIDRL- 145 Query: 153 VTRQRQAGFKRAVFVYYLIAQNTIDELV 180 + G V VY+++A ++++ + Sbjct: 146 ----HRIGQTHPVKVYHVVAGQSVEQHL 169 >gi|328849288|gb|EGF98471.1| hypothetical protein MELLADRAFT_95638 [Melampsora larici-populina 98AG31] Length = 244 Score = 66.9 bits (162), Expect = 2e-09, Method: Composition-based stats. Identities = 17/88 (19%), Positives = 38/88 (43%), Gaps = 6/88 (6%) Query: 93 TLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIG 152 T ++ + N+ I + G GLN+ + + W+ + QQ I+R+ Sbjct: 88 THERTCQLNRFKNDNNIEAFIVSIEAGGVGLNMTC-ADEVYLMDAHWNPQIVQQAIDRL- 145 Query: 153 VTRQRQAGFKRAVFVYYLIAQNTIDELV 180 + G V VY+++A ++++ + Sbjct: 146 ----HRIGQTHPVKVYHVVAGQSVEQHL 169 >gi|183222781|ref|YP_001840777.1| ATP-dependent RNA helicase [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)'] gi|189912812|ref|YP_001964367.1| DNA/RNA helicase [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Ames)'] gi|167777488|gb|ABZ95789.1| DNA/RNA helicase Superfamily II [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Ames)'] gi|167781203|gb|ABZ99501.1| ATP-dependent RNA helicase [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)'] Length = 948 Score = 66.9 bits (162), Expect = 2e-09, Method: Composition-based stats. Identities = 43/205 (20%), Positives = 81/205 (39%), Gaps = 35/205 (17%) Query: 9 RELYCDLQGENIEAFNSASK----TVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIE 64 + +L+ E + +F + + + L K KE D+K + L + Sbjct: 426 EDFITELEDEEMSSFQRIKRELFTLNRLIHL---------GKQIKE--DKKTQKLRETLY 474 Query: 65 KANA---APIIVAYHFNSDLARLQKAF-PQGRT--------LDKDPCTIQEWNEGKIPLL 112 + I+ F + LQ P + +D+ IQ++ E +L Sbjct: 475 RLKKEGHKKFIIFTQFRTTQDHLQSVLEPDFKVSPFHGSLSMDEKEVAIQKFKE-DYEIL 533 Query: 113 FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIA 172 + G G NLQ+ NIL + L W + +Q I RI + G K V+++ + Sbjct: 534 IC-TEAGGEGRNLQF-ANILFNYDLPWSPLKIEQRIGRI-----HRFGQKDNVYIFNFAS 586 Query: 173 QNTIDELVLQRLRTKSTIQDLLLNA 197 ++T+ E +L+ L K + + + A Sbjct: 587 KDTVAERILEVLTNKIRLFEESIGA 611 >gi|119181862|ref|XP_001242109.1| hypothetical protein CIMG_06005 [Coccidioides immitis RS] Length = 832 Score = 66.9 bits (162), Expect = 2e-09, Method: Composition-based stats. Identities = 30/144 (20%), Positives = 51/144 (35%), Gaps = 22/144 (15%) Query: 39 AVYYDEEKHWK--EVHDEKIKALEVIIEKAN---AAPIIVAYHFNSDLARLQKAFPQ--- 90 A+ D+ K E KI+AL I+ + +V + S L ++ + Sbjct: 632 ALGEDDSKVDVDPEESSSKIQALIKILTAHGQAPGSKTVVFSQWTSFLDLIEPQLVKHNI 691 Query: 91 --GRTLDKDPCTIQEW------NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLE 142 R K T ++ N+ ++ A C GLNL N ++ WW Sbjct: 692 TFTRIDGKMSSTKRDVAMATLTNDPNCTVMLASLNVCSVGLNL-VAANQVILTDSWWAPA 750 Query: 143 EHQQMIERIGVTRQRQAGFKRAVF 166 Q ++R+ + G KR Sbjct: 751 IEDQAVDRV-----YRLGQKRPTT 769 >gi|242769688|ref|XP_002341821.1| SNF2 family helicase, putative [Talaromyces stipitatus ATCC 10500] gi|218725017|gb|EED24434.1| SNF2 family helicase, putative [Talaromyces stipitatus ATCC 10500] Length = 1975 Score = 66.9 bits (162), Expect = 2e-09, Method: Composition-based stats. Identities = 29/177 (16%), Positives = 62/177 (35%), Gaps = 28/177 (15%) Query: 44 EEKHWKEVHDEKIKALEVIIEKANAA-PIIVAYHFNSDLARLQKAFP--------QGRTL 94 + K+ L +++ + II+ Y N+ + + TL Sbjct: 1653 SQTKLIATTSAKLTYLLDRVQELHKEEKIIIFYENNNTAFWIAEGLEMLGIDFRIYANTL 1712 Query: 95 DKDPCT--IQEWNEGK-IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERI 151 + + E + +L HGL++ + + + W + Q I+R Sbjct: 1713 KTSQKAAYLSLFEESSSVRVLLMDLRQASHGLHI-ASASRVFIVNPIWRPQVESQAIKR- 1770 Query: 152 GVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLR----------TKSTIQDLLLNAL 198 + G R VFV L+ ++T++E +L R + K + D ++ + Sbjct: 1771 ----AHRIGQTRPVFVETLVLKDTLEEKMLHRRQEMSNSEMQHAEKDMLDDSTMSTI 1823 >gi|121698875|ref|XP_001267835.1| C-5 cytosine-specific DNA methylase, putative [Aspergillus clavatus NRRL 1] gi|119395977|gb|EAW06409.1| C-5 cytosine-specific DNA methylase, putative [Aspergillus clavatus NRRL 1] Length = 2150 Score = 66.9 bits (162), Expect = 2e-09, Method: Composition-based stats. Identities = 35/153 (22%), Positives = 56/153 (36%), Gaps = 12/153 (7%) Query: 46 KHWKEVHDEKIKALEVIIEKA-NAAPIIVAYHFNSDLARLQKAFPQGRTLDK-----DPC 99 H K+ L I+ I+ + + KAF + D Sbjct: 1963 DHSTHFGGSKLDKLIEIVRSIPKEDRAILFIQYKELIEIASKAFDLAKITHTVISAGDSK 2022 Query: 100 TIQEWNE---GKIPLLFAHPAS-CGHGLNLQYGGNILVFFSLWWDLEEHQ-QMIERIGVT 154 I+E+ + G +L + S GLNLQ N + F S ++ + Sbjct: 2023 KIEEFKKPSFGNNRILILNLGSEMAAGLNLQC-ANHVFFLSPMLTQTQYDYDSSMTQAIG 2081 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTK 187 R R+ G + V VY+L+ + TID + Q R K Sbjct: 2082 RARRYGQIKHVHVYHLLVKRTIDVNIFQDRRGK 2114 >gi|119194229|ref|XP_001247718.1| hypothetical protein CIMG_01489 [Coccidioides immitis RS] Length = 1271 Score = 66.9 bits (162), Expect = 2e-09, Method: Composition-based stats. Identities = 29/180 (16%), Positives = 64/180 (35%), Gaps = 34/180 (18%) Query: 47 HWKEVHDEKIKALEV-IIEKANAAPIIVAYHFNSD-------------LARLQKAFPQGR 92 K+ L + E II+ Y N++ R+ + + + Sbjct: 917 QVVATTSAKLSYLLDRVFELQKEEKIIIFYENNNNAFWVAEGLEMLGVEFRIYASTLKPK 976 Query: 93 TLDKDPCTIQEWNEGK-IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERI 151 + +N + + +L HGL+L + + + WD Q I+R Sbjct: 977 LK---AEYLALFNNSECVRVLLMDVRQASHGLHL-ASASRIFIINPIWDPNIESQAIKR- 1031 Query: 152 GVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLR----------TKSTIQDLLLNALKKE 201 + + V+V L+ + T+++ +L+R + K + D ++++ KE Sbjct: 1032 ----AHRISQMKPVYVETLVLKGTLEDKMLRRRKQMTNIEMLHAEKDLLDDRTMSSIIKE 1087 >gi|221127791|ref|XP_002156270.1| PREDICTED: similar to Zinc finger, RAN-binding domain containing 3 [Hydra magnipapillata] Length = 576 Score = 66.5 bits (161), Expect = 2e-09, Method: Composition-based stats. Identities = 28/148 (18%), Positives = 54/148 (36%), Gaps = 18/148 (12%) Query: 61 VIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLD----------KDPCTIQEWNEGK-I 109 +I+ +V + + +Q+ Q + + ++ + K Sbjct: 333 DLIDGM-PNKFLVFCFHMTMVQAIQETLVQKKVKYICITGSVPPVQRGHLVETFQSNKEY 391 Query: 110 PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYY 169 + + GL L + +VF L Q +R + G K AV ++Y Sbjct: 392 RVAILSIQAASTGLTLT-AADHVVFAELHHTPGVLLQAEDRC-----HRIGQKNAVQIHY 445 Query: 170 LIAQNTIDELVLQRLRTKSTIQDLLLNA 197 L+AQ TID+++ L+ K + LN Sbjct: 446 LLAQGTIDDILWTMLQRKVMVTTAALNG 473 >gi|297679361|ref|XP_002817505.1| PREDICTED: e3 ubiquitin-protein ligase SHPRH-like isoform 1 [Pongo abelii] Length = 1683 Score = 66.5 bits (161), Expect = 2e-09, Method: Composition-based stats. Identities = 29/164 (17%), Positives = 59/164 (35%), Gaps = 18/164 (10%) Query: 35 LANGAVYYDEEKHWKEVHDEKIKA----LEVIIEKANAAPIIVAYHFNSDLARLQKA--- 87 + +E+ K H K++A L I + A +V + L + KA Sbjct: 1491 FTSEKANQEEDIPVKGSHSTKVEAVVRTLMKIQLRDPGAKALVFSTWQDVLDIISKALTD 1550 Query: 88 ----FPQGRTLDKDPCTIQEW-NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLE 142 F Q + + + + +I +L + +GL + ++L + Sbjct: 1551 NNMEFAQISRVKTFQENLSAFKRDPQINILLLPLHTGSNGLTIIEATHVL-LVEPILNPA 1609 Query: 143 EHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRT 186 Q I R+ + G + V+ + + TI+E + L+T Sbjct: 1610 HELQAIGRV-----HRIGQTKPTIVHRFLIKATIEERMQAMLKT 1648 >gi|148671572|gb|EDL03519.1| SNF2 histone linker PHD RING helicase, isoform CRA_a [Mus musculus] Length = 1646 Score = 66.5 bits (161), Expect = 2e-09, Method: Composition-based stats. Identities = 28/164 (17%), Positives = 56/164 (34%), Gaps = 18/164 (10%) Query: 35 LANGAVYYDEEKHWKEVHDEKIKA----LEVIIEKANAAPIIVAYHFNSDLARLQKAFPQ 90 + +++ K H K++A L I + A +V + L + KA Sbjct: 1454 FTSEKANQEDDIPVKGSHSTKVEAVVRTLMKIQLRDPGAKALVFSTWQDVLDIISKALTD 1513 Query: 91 GRTLDKDPCTIQEWNE--------GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLE 142 I+ + E I +L + +GL + ++L + Sbjct: 1514 NNMEFTQISRIKTFQENLSAFKYDPHINILLLPLHTGSNGLTIIEATHVL-LVEPILNPA 1572 Query: 143 EHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRT 186 Q I R+ + G + V+ + + TI+E + L+T Sbjct: 1573 HELQAIGRV-----HRIGQTKPTIVHRFLIKATIEERMQAMLKT 1611 >gi|148671575|gb|EDL03522.1| SNF2 histone linker PHD RING helicase, isoform CRA_d [Mus musculus] Length = 1638 Score = 66.5 bits (161), Expect = 2e-09, Method: Composition-based stats. Identities = 28/164 (17%), Positives = 56/164 (34%), Gaps = 18/164 (10%) Query: 35 LANGAVYYDEEKHWKEVHDEKIKA----LEVIIEKANAAPIIVAYHFNSDLARLQKAFPQ 90 + +++ K H K++A L I + A +V + L + KA Sbjct: 1446 FTSEKANQEDDIPVKGSHSTKVEAVVRTLMKIQLRDPGAKALVFSTWQDVLDIISKALTD 1505 Query: 91 GRTLDKDPCTIQEWNE--------GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLE 142 I+ + E I +L + +GL + ++L + Sbjct: 1506 NNMEFTQISRIKTFQENLSAFKYDPHINILLLPLHTGSNGLTIIEATHVL-LVEPILNPA 1564 Query: 143 EHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRT 186 Q I R+ + G + V+ + + TI+E + L+T Sbjct: 1565 HELQAIGRV-----HRIGQTKPTIVHRFLIKATIEERMQAMLKT 1603 >gi|109072456|ref|XP_001086512.1| PREDICTED: e3 ubiquitin-protein ligase SHPRH-like isoform 3 [Macaca mulatta] gi|109072458|ref|XP_001086641.1| PREDICTED: e3 ubiquitin-protein ligase SHPRH-like isoform 4 [Macaca mulatta] Length = 1683 Score = 66.5 bits (161), Expect = 2e-09, Method: Composition-based stats. Identities = 29/164 (17%), Positives = 59/164 (35%), Gaps = 18/164 (10%) Query: 35 LANGAVYYDEEKHWKEVHDEKIKA----LEVIIEKANAAPIIVAYHFNSDLARLQKA--- 87 + +E+ K H K++A L I + A +V + L + KA Sbjct: 1491 FTSEKANQEEDIPVKGSHSTKVEAVVRTLMKIQLRDPGAKALVFSTWQDVLDIISKALTD 1550 Query: 88 ----FPQGRTLDKDPCTIQEW-NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLE 142 F Q + + + + +I +L + +GL + ++L + Sbjct: 1551 NNMEFAQISRVKTFQENLSAFKRDPQINILLLPLHTGSNGLTIIEATHVL-LVEPILNPA 1609 Query: 143 EHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRT 186 Q I R+ + G + V+ + + TI+E + L+T Sbjct: 1610 HELQAIGRV-----HRIGQTKPTIVHRFLIKATIEERMQAMLKT 1648 >gi|118150662|ref|NP_001071175.1| E3 ubiquitin-protein ligase SHPRH isoform a [Mus musculus] gi|81894566|sp|Q7TPQ3|SHPRH_MOUSE RecName: Full=E3 ubiquitin-protein ligase SHPRH; AltName: Full=SNF2, histone-linker, PHD and RING finger domain-containing helicase gi|32822862|gb|AAH55003.1| SNF2 histone linker PHD RING helicase [Mus musculus] Length = 1674 Score = 66.5 bits (161), Expect = 2e-09, Method: Composition-based stats. Identities = 28/164 (17%), Positives = 56/164 (34%), Gaps = 18/164 (10%) Query: 35 LANGAVYYDEEKHWKEVHDEKIKA----LEVIIEKANAAPIIVAYHFNSDLARLQKAFPQ 90 + +++ K H K++A L I + A +V + L + KA Sbjct: 1482 FTSEKANQEDDIPVKGSHSTKVEAVVRTLMKIQLRDPGAKALVFSTWQDVLDIISKALTD 1541 Query: 91 GRTLDKDPCTIQEWNE--------GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLE 142 I+ + E I +L + +GL + ++L + Sbjct: 1542 NNMEFTQISRIKTFQENLSAFKYDPHINILLLPLHTGSNGLTIIEATHVL-LVEPILNPA 1600 Query: 143 EHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRT 186 Q I R+ + G + V+ + + TI+E + L+T Sbjct: 1601 HELQAIGRV-----HRIGQTKPTIVHRFLIKATIEERMQAMLKT 1639 >gi|27436873|ref|NP_775105.1| E3 ubiquitin-protein ligase SHPRH isoform b [Homo sapiens] gi|27369406|gb|AAO06907.1| helicase-like protein [Homo sapiens] gi|119568222|gb|EAW47837.1| SNF2 histone linker PHD RING helicase, isoform CRA_b [Homo sapiens] Length = 1659 Score = 66.5 bits (161), Expect = 2e-09, Method: Composition-based stats. Identities = 29/164 (17%), Positives = 59/164 (35%), Gaps = 18/164 (10%) Query: 35 LANGAVYYDEEKHWKEVHDEKIKA----LEVIIEKANAAPIIVAYHFNSDLARLQKA--- 87 + +E+ K H K++A L I + A +V + L + KA Sbjct: 1495 FTSEKANQEEDIPVKGSHSTKVEAVVRTLMKIQLRDPGAKALVFSTWQDVLDIISKALTD 1554 Query: 88 ----FPQGRTLDKDPCTIQEW-NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLE 142 F Q + + + + +I +L + +GL + ++L + Sbjct: 1555 NNMEFAQISRVKTFQENLSAFKRDPQINILLLPLHTGSNGLTIIEATHVL-LVEPILNPA 1613 Query: 143 EHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRT 186 Q I R+ + G + V+ + + TI+E + L+T Sbjct: 1614 HELQAIGRV-----HRIGQTKPTIVHRFLIKATIEERMQAMLKT 1652 >gi|324502242|gb|ADY40988.1| DNA repair and recombination protein RAD54B [Ascaris suum] Length = 415 Score = 66.5 bits (161), Expect = 2e-09, Method: Composition-based stats. Identities = 26/129 (20%), Positives = 43/129 (33%), Gaps = 20/129 (15%) Query: 51 VHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQK----------AFPQGRTLDKDP 98 V K+ ++ ++V +F L L + + Sbjct: 282 VDSGKLSVFVKMMVSLRETNEKVVVVSNFTKTLDMLSEVCKGIFCTVTRLDGSVVPHRRM 341 Query: 99 CTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 + E+N +P + + G GLNL G + LV F W+ Q + RI Sbjct: 342 QLVDEFNTSSLPNHVFLLSTKAVGVGLNL-IGASRLVLFDSDWNPAFDVQAMARIW---- 396 Query: 157 RQAGFKRAV 165 + G K AV Sbjct: 397 -RDGQKNAV 404 >gi|320588854|gb|EFX01322.1| DNA repair and recombination protein rad5c [Grosmannia clavigera kw1407] Length = 852 Score = 66.5 bits (161), Expect = 2e-09, Method: Composition-based stats. Identities = 32/164 (19%), Positives = 64/164 (39%), Gaps = 16/164 (9%) Query: 38 GAVYYDEEKHW--KEVHDEKIKA-LEVI---IEKANAAPIIVAYHFNSDLARLQKAFPQG 91 G V D+E + E + KI+A +E + + ++A H A ++ G Sbjct: 686 GKVIEDDEATYFNDEGYSTKIQAVIEDVRRDLATTKRTLDLLASHLKD--AGIRYLRVDG 743 Query: 92 RTLDKDPCT-IQEW-NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIE 149 ++ ++E+ + + +L + G GLNL N + W+ Q I Sbjct: 744 SLTNRVRQDSLREFAQDADVRVLIMTTGTGGIGLNLTC-ANRIFLVEPQWNPGVESQAIA 802 Query: 150 RIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDL 193 R + G + V V + ++T +E +L + K + + Sbjct: 803 R-----AIRLGQESEVLVTRYLVEDTEEEAILAQQIGKKRLAAM 841 >gi|74202948|dbj|BAE26184.1| unnamed protein product [Mus musculus] Length = 469 Score = 66.5 bits (161), Expect = 2e-09, Method: Composition-based stats. Identities = 28/164 (17%), Positives = 56/164 (34%), Gaps = 18/164 (10%) Query: 35 LANGAVYYDEEKHWKEVHDEKIKA----LEVIIEKANAAPIIVAYHFNSDLARLQKAFPQ 90 + +++ K H K++A L I + A +V + L + KA Sbjct: 299 FTSEKANQEDDIPVKGSHSTKVEAVVRTLMKIQLRDPGAKALVFSTWQDVLDIISKALTD 358 Query: 91 GRTLDKDPCTIQEWNE--------GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLE 142 I+ + E I +L + +GL + ++L + Sbjct: 359 NNMEFTQISRIKTFQENLSAFKYDPHINILLLPLHTGSNGLTIIEATHVL-LVEPILNPA 417 Query: 143 EHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRT 186 Q I R+ + G + V+ + + TI+E + L+T Sbjct: 418 HELQAIGRV-----HRIGQTKPTIVHRFLIKATIEERMQAMLKT 456 >gi|114609684|ref|XP_001172966.1| PREDICTED: SNF2 histone linker PHD RING helicase isoform 4 [Pan troglodytes] Length = 1687 Score = 66.5 bits (161), Expect = 2e-09, Method: Composition-based stats. Identities = 29/164 (17%), Positives = 59/164 (35%), Gaps = 18/164 (10%) Query: 35 LANGAVYYDEEKHWKEVHDEKIKA----LEVIIEKANAAPIIVAYHFNSDLARLQKA--- 87 + +E+ K H K++A L I + A +V + L + KA Sbjct: 1495 FTSEKANQEEDIPVKGSHSTKVEAVVRTLMKIQLRDPGAKALVFSTWQDVLDIISKALTD 1554 Query: 88 ----FPQGRTLDKDPCTIQEW-NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLE 142 F Q + + + + +I +L + +GL + ++L + Sbjct: 1555 NNMEFAQISRVKTFQENLSAFKRDPQINILLLPLHTGSNGLTIIEATHVL-LVEPILNPA 1613 Query: 143 EHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRT 186 Q I R+ + G + V+ + + TI+E + L+T Sbjct: 1614 HELQAIGRV-----HRIGQTKPTIVHRFLIKATIEERMQAMLKT 1652 >gi|114609678|ref|XP_001172976.1| PREDICTED: SNF2 histone linker PHD RING helicase isoform 5 [Pan troglodytes] gi|114609680|ref|XP_527525.2| PREDICTED: SNF2 histone linker PHD RING helicase isoform 6 [Pan troglodytes] Length = 1683 Score = 66.5 bits (161), Expect = 2e-09, Method: Composition-based stats. Identities = 29/164 (17%), Positives = 59/164 (35%), Gaps = 18/164 (10%) Query: 35 LANGAVYYDEEKHWKEVHDEKIKA----LEVIIEKANAAPIIVAYHFNSDLARLQKA--- 87 + +E+ K H K++A L I + A +V + L + KA Sbjct: 1491 FTSEKANQEEDIPVKGSHSTKVEAVVRTLMKIQLRDPGAKALVFSTWQDVLDIISKALTD 1550 Query: 88 ----FPQGRTLDKDPCTIQEW-NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLE 142 F Q + + + + +I +L + +GL + ++L + Sbjct: 1551 NNMEFAQISRVKTFQENLSAFKRDPQINILLLPLHTGSNGLTIIEATHVL-LVEPILNPA 1609 Query: 143 EHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRT 186 Q I R+ + G + V+ + + TI+E + L+T Sbjct: 1610 HELQAIGRV-----HRIGQTKPTIVHRFLIKATIEERMQAMLKT 1648 >gi|32480766|gb|AAO26201.1| SNF2 histone linker PHD RING helicase [Homo sapiens] Length = 1683 Score = 66.5 bits (161), Expect = 2e-09, Method: Composition-based stats. Identities = 29/164 (17%), Positives = 59/164 (35%), Gaps = 18/164 (10%) Query: 35 LANGAVYYDEEKHWKEVHDEKIKA----LEVIIEKANAAPIIVAYHFNSDLARLQKA--- 87 + +E+ K H K++A L I + A +V + L + KA Sbjct: 1491 FTSEKANQEEDIPVKGSHSTKVEAVVRTLMKIQLRDPGAKALVFSTWQDVLDIISKALTD 1550 Query: 88 ----FPQGRTLDKDPCTIQEW-NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLE 142 F Q + + + + +I +L + +GL + ++L + Sbjct: 1551 NNMEFAQISRVKTFQENLSAFKRDPQINILLLPLHTGSNGLTIIEATHVL-LVEPILNPA 1609 Query: 143 EHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRT 186 Q I R+ + G + V+ + + TI+E + L+T Sbjct: 1610 HELQAIGRV-----HRIGQTKPTIVHRFLIKATIEERMQAMLKT 1648 >gi|302885430|ref|XP_003041607.1| hypothetical protein NECHADRAFT_77238 [Nectria haematococca mpVI 77-13-4] gi|256722511|gb|EEU35894.1| hypothetical protein NECHADRAFT_77238 [Nectria haematococca mpVI 77-13-4] Length = 948 Score = 66.5 bits (161), Expect = 2e-09, Method: Composition-based stats. Identities = 22/155 (14%), Positives = 53/155 (34%), Gaps = 18/155 (11%) Query: 53 DEKIKALEVIIEKANAA-PIIVAYHFNSDLARLQKAFPQG----------RTLDKDPCTI 101 K++AL I+ + IV + L ++ + ++ + Sbjct: 778 SSKVEALMTDIKTLPPSEKCIVFSTWRLTLDMVEVGLEKAHIPSVRFDGKVPQNERQEIV 837 Query: 102 QEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 + + + + ++ + GL L W+ +Q + RI + G Sbjct: 838 ERFRTDPSVRVMLLTLSCGAAGLTLTV-ATRAYLMEPHWNPTLEEQALARI-----HRIG 891 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 R V +++ ++ V++ +K + LLL Sbjct: 892 QTREVTTVRFYVRDSFEQHVMEVQDSKKHLSGLLL 926 >gi|119568221|gb|EAW47836.1| SNF2 histone linker PHD RING helicase, isoform CRA_a [Homo sapiens] Length = 1687 Score = 66.5 bits (161), Expect = 2e-09, Method: Composition-based stats. Identities = 29/164 (17%), Positives = 59/164 (35%), Gaps = 18/164 (10%) Query: 35 LANGAVYYDEEKHWKEVHDEKIKA----LEVIIEKANAAPIIVAYHFNSDLARLQKA--- 87 + +E+ K H K++A L I + A +V + L + KA Sbjct: 1495 FTSEKANQEEDIPVKGSHSTKVEAVVRTLMKIQLRDPGAKALVFSTWQDVLDIISKALTD 1554 Query: 88 ----FPQGRTLDKDPCTIQEW-NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLE 142 F Q + + + + +I +L + +GL + ++L + Sbjct: 1555 NNMEFAQISRVKTFQENLSAFKRDPQINILLLPLHTGSNGLTIIEATHVL-LVEPILNPA 1613 Query: 143 EHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRT 186 Q I R+ + G + V+ + + TI+E + L+T Sbjct: 1614 HELQAIGRV-----HRIGQTKPTIVHRFLIKATIEERMQAMLKT 1652 >gi|109734410|gb|AAI17687.1| SHPRH protein [Homo sapiens] Length = 1683 Score = 66.5 bits (161), Expect = 2e-09, Method: Composition-based stats. Identities = 29/164 (17%), Positives = 59/164 (35%), Gaps = 18/164 (10%) Query: 35 LANGAVYYDEEKHWKEVHDEKIKA----LEVIIEKANAAPIIVAYHFNSDLARLQKA--- 87 + +E+ K H K++A L I + A +V + L + KA Sbjct: 1491 FTSEKANQEEDIPVKGSHSTKVEAVVRTLMKIQLRDPGAKALVFSTWQDVLDIISKALTD 1550 Query: 88 ----FPQGRTLDKDPCTIQEW-NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLE 142 F Q + + + + +I +L + +GL + ++L + Sbjct: 1551 NNMEFAQISRVKTFQENLSAFKRDPQINILLLPLHTGSNGLTIIEATHVL-LVEPILNPA 1609 Query: 143 EHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRT 186 Q I R+ + G + V+ + + TI+E + L+T Sbjct: 1610 HELQAIGRV-----HRIGQTKPTIVHRFLIKATIEERMQAMLKT 1648 >gi|75812890|ref|YP_320507.1| Type III restriction enzyme, res subunit [Anabaena variabilis ATCC 29413] gi|75705646|gb|ABA25318.1| Type III restriction enzyme, res subunit [Anabaena variabilis ATCC 29413] Length = 900 Score = 66.5 bits (161), Expect = 2e-09, Method: Composition-based stats. Identities = 25/108 (23%), Positives = 48/108 (44%), Gaps = 9/108 (8%) Query: 92 RTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERI 151 +K +++N+G++ + G G++LQ L+ L W+ Q + R+ Sbjct: 522 SLREKRENAAEKFNKGEVR-FLISTEAGGEGIDLQENCYSLIHVDLPWNPMRLHQRVGRL 580 Query: 152 GVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 + G KRAV V L T++ L+ +L K D ++ +L+ Sbjct: 581 N-----RYGQKRAVEVITLRNPQTVETLIWDKLNRKI---DNIMQSLQ 620 >gi|291227441|ref|XP_002733693.1| PREDICTED: RAD54 homolog B-like [Saccoglossus kowalevskii] Length = 921 Score = 66.5 bits (161), Expect = 2e-09, Method: Composition-based stats. Identities = 29/175 (16%), Positives = 54/175 (30%), Gaps = 44/175 (25%) Query: 41 YYDEEKHWKEVHDEKIKALEVIIEK-ANAAP---IIVAYHFNSDLARLQKAFPQ------ 90 Y DE K+ L +++ N P ++V ++ L LQ+ + Sbjct: 671 YRDESNAVDYTDSGKLIVLAAMLKSFHNDTPQQRVVVVSNYTQTLDLLQQLCDKEGYTYG 730 Query: 91 ---GRTLDKDPCTI-QEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEH 144 G T I + + + G GLNL G L+ + + W+ Sbjct: 731 RLDGSTPTATRQDIVNRFTSKYSDQFVFLLSCKAGGVGLNL-IGAARLILYDIDWNPAND 789 Query: 145 QQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 Q +I+E + QR +K + +++ K Sbjct: 790 LQ---------------------------GSIEEKIYQRQISKQGLSGAVVDYRK 817 >gi|169869799|ref|XP_001841456.1| hypothetical protein CC1G_12776 [Coprinopsis cinerea okayama7#130] gi|116497465|gb|EAU80360.1| hypothetical protein CC1G_12776 [Coprinopsis cinerea okayama7#130] Length = 1321 Score = 66.5 bits (161), Expect = 2e-09, Method: Composition-based stats. Identities = 28/138 (20%), Positives = 51/138 (36%), Gaps = 16/138 (11%) Query: 69 APIIVAYHFNSDLARLQKAF----------PQGRTLDKDPCTIQEWNEGKIPLLFAHPAS 118 ++V F S ++ F +D+ + +N + Sbjct: 836 RKVLVYQEFPSFTGLVRNIFRLHGVKVLAIDGATPIDQRSSIVATFNTDPEYRVLIFSKV 895 Query: 119 CGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDE 178 GLNL N+++F W ++ +Q+I R R R V V +++A++T D Sbjct: 896 GATGLNLTR-ANVVLFLDQPWSAQDERQIIGRAYRQR-----QTREVTVIHILAEDTADI 949 Query: 179 LVLQRLRTKSTIQDLLLN 196 + R K + D LN Sbjct: 950 TLSLLARGKKDMLDAFLN 967 >gi|289547541|ref|NP_001036148.2| E3 ubiquitin-protein ligase SHPRH isoform a [Homo sapiens] gi|146325723|sp|Q149N8|SHPRH_HUMAN RecName: Full=E3 ubiquitin-protein ligase SHPRH; AltName: Full=SNF2, histone-linker, PHD and RING finger domain-containing helicase gi|55665328|emb|CAH70765.1| SNF2 histone linker PHD RING helicase [Homo sapiens] gi|57209105|emb|CAI41120.1| SNF2 histone linker PHD RING helicase [Homo sapiens] Length = 1683 Score = 66.5 bits (161), Expect = 2e-09, Method: Composition-based stats. Identities = 29/164 (17%), Positives = 59/164 (35%), Gaps = 18/164 (10%) Query: 35 LANGAVYYDEEKHWKEVHDEKIKA----LEVIIEKANAAPIIVAYHFNSDLARLQKA--- 87 + +E+ K H K++A L I + A +V + L + KA Sbjct: 1491 FTSEKANQEEDIPVKGSHSTKVEAVVRTLMKIQLRDPGAKALVFSTWQDVLDIISKALTD 1550 Query: 88 ----FPQGRTLDKDPCTIQEW-NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLE 142 F Q + + + + +I +L + +GL + ++L + Sbjct: 1551 NNMEFAQISRVKTFQENLSAFKRDPQINILLLPLHTGSNGLTIIEATHVL-LVEPILNPA 1609 Query: 143 EHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRT 186 Q I R+ + G + V+ + + TI+E + L+T Sbjct: 1610 HELQAIGRV-----HRIGQTKPTIVHRFLIKATIEERMQAMLKT 1648 >gi|328868528|gb|EGG16906.1| SNF2-related domain-containing protein [Dictyostelium fasciculatum] Length = 1268 Score = 66.5 bits (161), Expect = 2e-09, Method: Composition-based stats. Identities = 16/64 (25%), Positives = 29/64 (45%), Gaps = 5/64 (7%) Query: 132 LVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQ 191 ++ F W+ Q ER+ + G K+ V +Y L+ TI+E + R K + Sbjct: 879 VILFDPDWNPSTDTQARERV-----YRIGQKKNVTIYRLMTTGTIEEKIYHRQIYKQFLS 933 Query: 192 DLLL 195 + +L Sbjct: 934 NKIL 937 >gi|268324801|emb|CBH38389.1| conserved hypothetical protein, ATP-dependent helicase related [uncultured archaeon] Length = 1120 Score = 66.5 bits (161), Expect = 2e-09, Method: Composition-based stats. Identities = 28/158 (17%), Positives = 68/158 (43%), Gaps = 18/158 (11%) Query: 40 VYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFP----QGRTL- 94 + + E +E+ + +K + I+ +++ F + L + T+ Sbjct: 455 IGFAETVKAREIESKLVKLRDDILSNIGDMKLLIFTEFRDTVDYLVAKLTSWGYKVNTIH 514 Query: 95 -----DKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIE 149 D + + + ++ A + G G+NLQ+ +++V + + W+ +Q + Sbjct: 515 GSMGMDARIEAEHRF-KNETQIMVA-TEAAGEGINLQF-CSLMVNYDIPWNPNRLEQRMG 571 Query: 150 RIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTK 187 RI + G + VF+Y +++++T + +L RL K Sbjct: 572 RI-----HRYGQDKEVFIYNMVSKDTREGQILDRLFDK 604 >gi|114558332|ref|XP_001157980.1| PREDICTED: chromodomain helicase DNA binding protein 1-like isoform 7 [Pan troglodytes] Length = 802 Score = 66.5 bits (161), Expect = 2e-09, Method: Composition-based stats. Identities = 16/79 (20%), Positives = 39/79 (49%), Gaps = 6/79 (7%) Query: 119 CGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDE 178 G G+NL + ++F ++ + Q R + G ++V V LI ++T++E Sbjct: 330 GGVGMNLT-AADTVIFVDSDFNPQNDLQAAAR-----AHRIGQNKSVKVIRLIGRDTVEE 383 Query: 179 LVLQRLRTKSTIQDLLLNA 197 +V ++ +K + ++++ Sbjct: 384 IVYRKAASKLQLTNMIIEG 402 >gi|255014572|ref|ZP_05286698.1| SNF2-related protein [Bacteroides sp. 2_1_7] Length = 916 Score = 66.5 bits (161), Expect = 2e-09, Method: Composition-based stats. Identities = 23/107 (21%), Positives = 45/107 (42%), Gaps = 11/107 (10%) Query: 94 LDKDPCTIQEWNEGK-IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIG 152 +I E+ ++ P + G GLN+ N ++ +S W+ + Q +R Sbjct: 796 RQTRQASINEFQAVDGFNVIIMSPVAAGMGLNVT-AANHVIHYSRQWNPAKESQATDR-- 852 Query: 153 VTRQRQAGFKRAVFVYYLIA----QNTIDELVLQRLRTKSTIQDLLL 195 + G + V+VYY +A T DE++ L K+++ + Sbjct: 853 ---AYRIGQTKDVYVYYPMAVTSDIKTFDEILDDLLSRKTSLATSTI 896 >gi|114609682|ref|XP_001172960.1| PREDICTED: SNF2 histone linker PHD RING helicase isoform 3 [Pan troglodytes] Length = 1572 Score = 66.5 bits (161), Expect = 2e-09, Method: Composition-based stats. Identities = 29/164 (17%), Positives = 59/164 (35%), Gaps = 18/164 (10%) Query: 35 LANGAVYYDEEKHWKEVHDEKIKA----LEVIIEKANAAPIIVAYHFNSDLARLQKA--- 87 + +E+ K H K++A L I + A +V + L + KA Sbjct: 1380 FTSEKANQEEDIPVKGSHSTKVEAVVRTLMKIQLRDPGAKALVFSTWQDVLDIISKALTD 1439 Query: 88 ----FPQGRTLDKDPCTIQEW-NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLE 142 F Q + + + + +I +L + +GL + ++L + Sbjct: 1440 NNMEFAQISRVKTFQENLSAFKRDPQINILLLPLHTGSNGLTIIEATHVL-LVEPILNPA 1498 Query: 143 EHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRT 186 Q I R+ + G + V+ + + TI+E + L+T Sbjct: 1499 HELQAIGRV-----HRIGQTKPTIVHRFLIKATIEERMQAMLKT 1537 >gi|46255694|gb|AAH05038.1| CHD1L protein [Homo sapiens] Length = 789 Score = 66.5 bits (161), Expect = 2e-09, Method: Composition-based stats. Identities = 16/79 (20%), Positives = 39/79 (49%), Gaps = 6/79 (7%) Query: 119 CGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDE 178 G G+NL + ++F ++ + Q R + G ++V V LI ++T++E Sbjct: 316 GGVGMNLT-AADTVIFVDSDFNPQNDLQAAAR-----AHRIGQNKSVKVIRLIGRDTVEE 369 Query: 179 LVLQRLRTKSTIQDLLLNA 197 +V ++ +K + ++++ Sbjct: 370 IVYRKAASKLQLTNMIIEG 388 >gi|303283812|ref|XP_003061197.1| SNF2 super family [Micromonas pusilla CCMP1545] gi|226457548|gb|EEH54847.1| SNF2 super family [Micromonas pusilla CCMP1545] Length = 1429 Score = 66.5 bits (161), Expect = 2e-09, Method: Composition-based stats. Identities = 30/170 (17%), Positives = 56/170 (32%), Gaps = 35/170 (20%) Query: 32 CLQLANGAVY---YDEEKHWKEVHD-----EKIKALEVIIE--KANAAPIIVAYHFNSDL 81 +L N + W+ D K+ L+ ++ +A+ +++ L Sbjct: 846 LRKLCNHPALNYPIAKGGEWRSGPDLVRAGGKLWVLDRVLVKLRASGHRVLLFSTMTKLL 905 Query: 82 ARLQKAFP-----------------QGRTLDKDPCTIQEWNEGKIP--LLFAHPASCGHG 122 L+ LD+ I ++NE L + G G Sbjct: 906 DLLEDYLKWRASTPICEGLEWCRIDGTTPLDEREVAITQFNERDSKKFLFLLSIRAAGRG 965 Query: 123 LNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIA 172 LNLQ + +V + + + +Q + R + G KR V V + A Sbjct: 966 LNLQT-ADTVVVYDPDPNPKNEEQAVAR-----SHRIGQKREVKVMHFEA 1009 >gi|154244631|ref|YP_001415589.1| helicase domain-containing protein [Xanthobacter autotrophicus Py2] gi|154158716|gb|ABS65932.1| helicase domain protein [Xanthobacter autotrophicus Py2] Length = 1167 Score = 66.5 bits (161), Expect = 2e-09, Method: Composition-based stats. Identities = 38/210 (18%), Positives = 81/210 (38%), Gaps = 30/210 (14%) Query: 1 MKQYHKFQRELYCDLQGENIEAFNSA---------SKTVKCLQ-LANGAVYYDEEKHWKE 50 ++ ++ +E +L+ +A +T+K L+ +A G + + W + Sbjct: 431 LRNIEEYGQEEIDELEDLISTGATTAETVEQLVLEVETLKSLEAMALGVLRSGVDTKWSQ 490 Query: 51 VHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFP-------------QGRTLDKD 97 ++ L I N +I+ L L + G + ++ Sbjct: 491 LNRILDDDLM-IDSAKNRRKLIIFTEPKDTLNYLLEKVRARLGNPEAVDVIHGGVSREER 549 Query: 98 PCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 ++ + + K L+ + G G+NLQ G +++V + L W+ + +Q RI Sbjct: 550 RKVVERFMQDKDLLVLIANDAAGEGVNLQRG-HLMVNYDLPWNPNKIEQRFGRI-----H 603 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTK 187 + G ++ L+A +T + V RL K Sbjct: 604 RIGQTEVCHLWNLVAADTREGEVYARLLEK 633 >gi|326389940|ref|ZP_08211503.1| helicase domain protein [Thermoanaerobacter ethanolicus JW 200] gi|325994000|gb|EGD52429.1| helicase domain protein [Thermoanaerobacter ethanolicus JW 200] Length = 894 Score = 66.5 bits (161), Expect = 2e-09, Method: Composition-based stats. Identities = 34/150 (22%), Positives = 64/150 (42%), Gaps = 23/150 (15%) Query: 53 DEKIKALEVIIEKA-----NAAPIIVAYHFNSDLARLQKAFP----QGRTLD------KD 97 D K + L I++ N+ IV F + L+ + L+ + Sbjct: 452 DAKAEVLIDFIDQLSMEYKNSQKFIVFTEFLATQQYLKDFLESKGYKVAILNGSMSMEER 511 Query: 98 PCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 +++E+ K + + G GLNLQ+ NI++ + L W+ + +Q I R+ Sbjct: 512 DASLKEFKNYKD--VLISTDAGGEGLNLQF-CNIVINYDLPWNPMKIEQRIGRVD----- 563 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTK 187 + G +R V V + ++TI+ V + L K Sbjct: 564 RIGQERDVLVLNFMLEDTIEFRVREVLEEK 593 >gi|10803646|ref|NP_046044.1| hypothetical protein VNG7099 [Halobacterium sp. NRC-1] gi|16120089|ref|NP_395677.1| ATP-dependent RNA helicase [Halobacterium sp. NRC-1] gi|169237287|ref|YP_001690493.1| ATP-dependent helicase [Halobacterium salinarum R1] gi|169237330|ref|YP_001690535.1| ATP-dependent helicase [Halobacterium salinarum R1] gi|2822377|gb|AAC82883.1| unknown [Halobacterium sp. NRC-1] gi|10584193|gb|AAG20812.1| ATP-dependent RNA helicase [Halobacterium sp. NRC-1] gi|167728353|emb|CAP15157.1| ATP-dependent helicase [Halobacterium salinarum R1] gi|167728846|emb|CAP15738.1| ATP-dependent helicase [Halobacterium salinarum R1] Length = 979 Score = 66.5 bits (161), Expect = 2e-09, Method: Composition-based stats. Identities = 30/167 (17%), Positives = 63/167 (37%), Gaps = 24/167 (14%) Query: 52 HDEKIKALEV----IIEKANAAPIIVAYHFNSDLARLQKA----FPQGRTL-----DKDP 98 D K + L+ I+ + I++ + L L+ + + D+ Sbjct: 463 TDSKAQMLKQFVDRILTEDPDEKILIFTEYTDTLEYLRDRVFAEYDIAQVYGDLDQDRRR 522 Query: 99 CTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQ 158 + ++ K + + GLNLQ+ +I+ F L W Q + R+ + Sbjct: 523 QEMADFENEKN--IMIATDAAQEGLNLQF-AHIMANFDLPWSPTRIDQRMGRL-----HR 574 Query: 159 AGFKRAVFVYYLIAQNTIDELVLQRLRTK-STIQDLLLNALKKETIH 204 G +R V + L ++T + +L L K I+ L ++ + + Sbjct: 575 YGQERTVEIRNLFFKDTRESEILNLLVEKTDQIESDL--GMRSDVLG 619 >gi|211906285|gb|ACJ11660.1| putative phage-associated helicase [Candidatus Hamiltonella defensa] gi|211906292|gb|ACJ11664.1| putative phage-associated helicase [Candidatus Hamiltonella defensa] Length = 72 Score = 66.5 bits (161), Expect = 2e-09, Method: Composition-based stats. Identities = 21/59 (35%), Positives = 33/59 (55%), Gaps = 5/59 (8%) Query: 144 HQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKET 202 +QQ R+ + G R VF+++L+ ++ID VL+ L K Q LL+ALKK+ Sbjct: 1 YQQFNARL-----HRQGQTRPVFIHHLVMNDSIDLTVLEALENKHITQKALLDALKKDI 54 >gi|19072776|gb|AAL84633.1|AF474993_1 putative transcription regulator WdMOT1 [Exophiala dermatitidis] Length = 1703 Score = 66.5 bits (161), Expect = 2e-09, Method: Composition-based stats. Identities = 15/62 (24%), Positives = 31/62 (50%), Gaps = 5/62 (8%) Query: 129 GNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKS 188 + ++F W+ ++ Q ++R + G K+ V VY LI + T++E ++ R K Sbjct: 1588 ADTVIFVEHDWNPQKDIQAMDR-----AHRIGXKKVVNVYRLITRGTLEEKIMXLQRFKI 1642 Query: 189 TI 190 + Sbjct: 1643 DV 1644 >gi|146324153|ref|XP_753558.2| SNF2 family helicase [Aspergillus fumigatus Af293] gi|129558042|gb|EAL91520.2| SNF2 family helicase, putative [Aspergillus fumigatus Af293] gi|159126710|gb|EDP51826.1| SNF2 family helicase, putative [Aspergillus fumigatus A1163] Length = 1167 Score = 66.5 bits (161), Expect = 2e-09, Method: Composition-based stats. Identities = 37/190 (19%), Positives = 72/190 (37%), Gaps = 40/190 (21%) Query: 43 DEEKHWKE-----VHDEKIKALEVIIE----KANAAPIIVAYHFNSDLARL--------- 84 DEE W + K+ + ++ + A ++V F D R+ Sbjct: 948 DEELDWISAAQGGMPGAKVDKVRDLVANWVREDPDAKVVVFTQF-LDFVRIFSSICAKEG 1006 Query: 85 ---QKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDL 141 + + +D + + ++ ++ A + G G+++ N + LWW+ Sbjct: 1007 WAHCRLTGKMSVGARDLSMNEFREKQEVKVMIASLMAGGTGIDMSM-ANKCILVDLWWNE 1065 Query: 142 EEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTK----------STIQ 191 QQ R+ + G ++ V V +I QNTID+ +LQ K +Q Sbjct: 1066 AVQQQAFCRL-----YRIGQEKVVEVVKIIVQNTIDDYILQLQTKKSVNINKAIGEEALQ 1120 Query: 192 --DLLLNALK 199 D +++ LK Sbjct: 1121 KRDKIIDLLK 1130 >gi|239827701|ref|YP_002950325.1| SNF2-related protein [Geobacillus sp. WCH70] gi|239807994|gb|ACS25059.1| SNF2-related protein [Geobacillus sp. WCH70] Length = 555 Score = 66.1 bits (160), Expect = 2e-09, Method: Composition-based stats. Identities = 31/163 (19%), Positives = 63/163 (38%), Gaps = 21/163 (12%) Query: 44 EEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQ-----GRTLDKDP 98 EK + K + +I+ N +I+ + + LQ Q Sbjct: 344 MEKINAVTTNSKAEKALQLIQSINDK-VIIFTEYRATQLYLQWFLKQHGISSVPFRGGFK 402 Query: 99 CTIQEW------NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIG 152 ++W N ++ F + G G+NLQ+ ++ + L W+ +Q I R+ Sbjct: 403 RGKKDWMKELFKNHAQV---FIATEAGGEGINLQF-CRHVINYDLPWNPMRLEQRIGRV- 457 Query: 153 VTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 + G V++Y +NT++E +L L K + + ++ Sbjct: 458 ----HRLGQTNDVYIYNFAVKNTVEEHILTLLYEKIRLFERVV 496 >gi|321460571|gb|EFX71612.1| hypothetical protein DAPPUDRAFT_10188 [Daphnia pulex] Length = 1009 Score = 66.1 bits (160), Expect = 2e-09, Method: Composition-based stats. Identities = 27/151 (17%), Positives = 57/151 (37%), Gaps = 17/151 (11%) Query: 47 HWKEVHDEKIKA----LEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTL------DK 96 K H K++A L +I + A +V + L + +A + +K Sbjct: 833 RVKGSHSTKVQAVVQQLLLIKKDDPDAKCLVFSTWIDVLLIVGRALDENNISHCSFFSNK 892 Query: 97 DPCTIQEW-NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTR 155 + ++ + + +L S +GLNL ++L+ + Q I R+ Sbjct: 893 SQVQLNKFKRDPSVSVLLIPIQSGANGLNLTEATHVLLM-EPILNPGSELQAIGRV---- 947 Query: 156 QRQAGFKRAVFVYYLIAQNTIDELVLQRLRT 186 + G + V+ + ++TI+E + L Sbjct: 948 -HRIGQTKPTVVHRFLVKHTIEEKMAVMLEK 977 >gi|290988418|ref|XP_002676918.1| predicted protein [Naegleria gruberi] gi|284090523|gb|EFC44174.1| predicted protein [Naegleria gruberi] Length = 1056 Score = 66.1 bits (160), Expect = 2e-09, Method: Composition-based stats. Identities = 22/165 (13%), Positives = 59/165 (35%), Gaps = 20/165 (12%) Query: 44 EEKHWKEVHDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAFPQGRTL------- 94 ++K K+ + +++ + ++ F L L+ + Sbjct: 513 DDKGILIYSSSKMVVVHKLLKKFRDANEKTLILSQFLEMLDVLESYLQSEQISYVRIDGS 572 Query: 95 ---DKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 ++ I ++ + + + G+NL N ++ + ++ Q R Sbjct: 573 CPSEERQRYIDKFQTDSECRVFLLSTKIS-QGINLT-AANHVIIYDSDFNPFNDSQAAAR 630 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 + G + VFVY L+ +++ ++ ++ R K + L+L Sbjct: 631 -----AHRIGQTKKVFVYRLVTKDSYEKYIISRASKKLGREKLVL 670 >gi|118575361|ref|YP_875104.1| superfamily II DNA/RNA helicase, SNF2 family [Cenarchaeum symbiosum A] gi|118193882|gb|ABK76800.1| superfamily II DNA/RNA helicase, SNF2 family [Cenarchaeum symbiosum A] Length = 1016 Score = 66.1 bits (160), Expect = 2e-09, Method: Composition-based stats. Identities = 30/169 (17%), Positives = 69/169 (40%), Gaps = 29/169 (17%) Query: 48 WKEVHDEKIKALEV----IIEKANAAPIIVAYHFNSDLARLQKAFPQ----------GRT 93 + + K+ L+ + + I+V L L + G Sbjct: 380 INQESEVKLGNLKETMSNLWKDHPGKKILVFTESKDTLDYLMGKMEKWGYLANTIHGGMG 439 Query: 94 LDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGV 153 L++ + + + K ++ A + G G+NLQ+ ++++ + L W+ +Q + R+ Sbjct: 440 LEERVEAERVF-KNKTDVMVA-TEAAGEGINLQF-CHLMINYDLPWNPNRLEQRMGRV-- 494 Query: 154 TRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKET 202 + G + V V+ LIA NT + + ++L + L ++K++ Sbjct: 495 ---HRYGQQYPVTVFNLIASNTREGEIFKKLFER-------LESIKRDV 533 >gi|259907267|ref|YP_002647623.1| Non-specific serine/threonine protein kinase [Erwinia pyrifoliae Ep1/96] gi|224962889|emb|CAX54370.1| Non-specific serine/threonine protein kinase [Erwinia pyrifoliae Ep1/96] gi|283477080|emb|CAY72980.1| SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 [Erwinia pyrifoliae DSM 12163] Length = 1081 Score = 66.1 bits (160), Expect = 2e-09, Method: Composition-based stats. Identities = 32/205 (15%), Positives = 72/205 (35%), Gaps = 31/205 (15%) Query: 16 QGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIK-ALEVI--IEKANAAPII 72 +G K + + E ++E H K+ L + I+++ +I Sbjct: 866 EGMQEAGTGMLGLLHKLKLICAHPFSVNPEPGYRE-HSPKLNWMLHTLDGIKRSGEDKVI 924 Query: 73 VAYHFNSDLARLQKAF----------------PQGRTLDKDPCTIQEWNE-GKIPLLFAH 115 V LQ A + + + I ++ ++ Sbjct: 925 VFTELRDLQRELQHAIYQRFGFRPVIINGDTSTKSNSQNSRQKLIDDFQSQPGFDVIILS 984 Query: 116 PASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQN- 174 + G G+N+Q N ++ F+ W+ + Q +R + G + V+VYY ++ Sbjct: 985 TVAVGFGVNVQK-ANHVIHFTRCWNPAKEDQATDR-----AYRIGQTKDVYVYYPTVRDS 1038 Query: 175 ---TIDELVLQRLRTKSTIQDLLLN 196 T +E + + L + ++ +L+ Sbjct: 1039 EVTTFEETLDELLNRRRSLARDMLS 1063 >gi|70732012|ref|YP_261757.1| SNF2 family helicase [Pseudomonas fluorescens Pf-5] gi|68346311|gb|AAY93917.1| helicase, SNF2 family [Pseudomonas fluorescens Pf-5] Length = 650 Score = 66.1 bits (160), Expect = 2e-09, Method: Composition-based stats. Identities = 25/154 (16%), Positives = 53/154 (34%), Gaps = 18/154 (11%) Query: 55 KIKALEVIIEKAN-AAPIIVAYHFNSDLARLQKAFPQGRT-----------LDKDPCTIQ 102 KI+ ++ + + +I+ F +A L+ + + + Sbjct: 484 KIRIAMDLLSELDPDDKVILFCEFKPTVAALKALCEEAGIGHVTLVGSDSPAKRQKAIDR 543 Query: 103 EWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFK 162 + + ++ G G NL N + F L W + Q +R + G Sbjct: 544 FQQDPDCRVFICTTSAAGTGNNLT-AANYVFFLGLPWTPGQQDQAEDR-----AYRNGQL 597 Query: 163 RAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 R V V + + +ID+ + + L K + L+ Sbjct: 598 RMVIVKIPLIEASIDQQLWELLLAKRQVSLELIE 631 >gi|194670154|ref|XP_594787.4| PREDICTED: helicase-like transcription factor-like [Bos taurus] gi|297478761|ref|XP_002690346.1| PREDICTED: helicase-like transcription factor-like [Bos taurus] gi|296483940|gb|DAA26055.1| helicase-like transcription factor-like [Bos taurus] Length = 1694 Score = 66.1 bits (160), Expect = 3e-09, Method: Composition-based stats. Identities = 29/164 (17%), Positives = 59/164 (35%), Gaps = 18/164 (10%) Query: 35 LANGAVYYDEEKHWKEVHDEKIKA----LEVIIEKANAAPIIVAYHFNSDLARLQKA--- 87 + +E+ K H K++A L I + A +V + L + KA Sbjct: 1502 FTSEKASQEEDIPVKGSHSTKVEAVVRTLMRIQLRDPGAKALVFSTWQDVLDIISKALTD 1561 Query: 88 ----FPQGRTLDKDPCTIQEW-NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLE 142 F Q + + + + +I +L + +GL + ++L + Sbjct: 1562 NNMEFAQISRVKTFQENLSAFKYDPQINILLLPLHTGSNGLTIIEATHVL-LVEPILNPA 1620 Query: 143 EHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRT 186 Q I R+ + G + V+ + + TI+E + L+T Sbjct: 1621 HELQAIGRV-----HRIGQTKPTIVHRFLIKATIEERMQAMLKT 1659 >gi|327295284|ref|XP_003232337.1| SNF2 family helicase [Trichophyton rubrum CBS 118892] gi|326465509|gb|EGD90962.1| SNF2 family helicase [Trichophyton rubrum CBS 118892] Length = 1167 Score = 66.1 bits (160), Expect = 3e-09, Method: Composition-based stats. Identities = 29/177 (16%), Positives = 64/177 (36%), Gaps = 34/177 (19%) Query: 47 HWKEVHDEKIK-ALEVIIEKANAAPIIVAY-------HFNSDLA------RLQKAFPQGR 92 K+ LE +++ + II+ Y L R+ + Sbjct: 865 KVIGTVSAKLSYLLEKVLQFQDTEKIIIFYESENTAFWIAEGLELVGTDFRIYAHTLKAS 924 Query: 93 TLDKDPCTIQEWNEGK-IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERI 151 + +NEG+ + +L HGL++ + + + WD Q I+R Sbjct: 925 QK---SEYLSTFNEGESVRVLLMDLRQASHGLHI-ASASRVFIVNPIWDPNIESQAIKR- 979 Query: 152 GVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLR----------TKSTIQDLLLNAL 198 + R V+V L+ ++T+++ +L+R + K + D ++++ Sbjct: 980 ----AHRISQTRPVYVETLVLKDTLEDKMLRRRKAMTSVEMQHAEKDMLNDGTMSSI 1032 >gi|222624012|gb|EEE58144.1| hypothetical protein OsJ_09059 [Oryza sativa Japonica Group] Length = 822 Score = 66.1 bits (160), Expect = 3e-09, Method: Composition-based stats. Identities = 26/176 (14%), Positives = 62/176 (35%), Gaps = 45/176 (25%) Query: 44 EEKHWKEVHDEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQ---------------- 85 E +H + K+ L++I++K + +++ L LQ Sbjct: 361 EGEHLVQ-ASGKLVMLDLILKKLHEVGHRVLLFAQMTQTLDILQDFLELRQYTYERLDGS 419 Query: 86 ----KAFPQGRTLDKDPC--TIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWW 139 + F ++ P +++ N+ + + G GLNL G + ++F+ W Sbjct: 420 VRAEERFAAIKSFSSQPTKGVVRDDNQSGAFVFMISTRAGGVGLNL-IGADTVIFYEQDW 478 Query: 140 DLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 + + +Q ++R + G V +++R K + ++ Sbjct: 479 NPQADKQALQR-----AHRIGQLNNV--------------IMRRAERKLKLSHSVI 515 >gi|58269458|ref|XP_571885.1| DNA supercoiling [Cryptococcus neoformans var. neoformans JEC21] gi|57228121|gb|AAW44578.1| DNA supercoiling, putative [Cryptococcus neoformans var. neoformans JEC21] Length = 585 Score = 66.1 bits (160), Expect = 3e-09, Method: Composition-based stats. Identities = 18/87 (20%), Positives = 33/87 (37%), Gaps = 6/87 (6%) Query: 97 DPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 + + + + GLNL N ++F W L+ Q I+R+ Sbjct: 475 RRLALDYFETPGVRVCLMDLKLAARGLNL-VSANRVIFLGPVWSLDVQAQAIKRV----- 528 Query: 157 RQAGFKRAVFVYYLIAQNTIDELVLQR 183 + G R V L+ + T +E + +R Sbjct: 529 HRIGQTRPTLVQILVTEGTFEEDIARR 555 >gi|148654421|ref|YP_001274626.1| helicase domain-containing protein [Roseiflexus sp. RS-1] gi|148566531|gb|ABQ88676.1| helicase domain protein [Roseiflexus sp. RS-1] Length = 1116 Score = 66.1 bits (160), Expect = 3e-09, Method: Composition-based stats. Identities = 32/141 (22%), Positives = 59/141 (41%), Gaps = 20/141 (14%) Query: 58 ALEVIIEKANAAPIIVAYHFNSDLARLQKAFP----------QGRTLDKDPCTIQEW-NE 106 ALE + + I++ L L+K G L + + NE Sbjct: 480 ALEQLNQNHPGEKILIFTESRDTLEHLEKNVRLWGYSVCTIHGGMDLASRIQAEKTFKNE 539 Query: 107 GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVF 166 +I + + G G+NLQ+ ++++ + + W+ +Q + RI + G R VF Sbjct: 540 AQIMVA---TEAAGEGINLQF-CHLMINYDIPWNPNRLEQRMGRI-----HRYGQTREVF 590 Query: 167 VYYLIAQNTIDELVLQRLRTK 187 V+ L+A +T + V Q + K Sbjct: 591 VFNLVATDTREGRVWQAVFRK 611 >gi|91089449|ref|XP_967843.1| PREDICTED: similar to conserved hypothetical protein [Tribolium castaneum] gi|270011408|gb|EFA07856.1| hypothetical protein TcasGA2_TC005426 [Tribolium castaneum] Length = 661 Score = 66.1 bits (160), Expect = 3e-09, Method: Composition-based stats. Identities = 21/138 (15%), Positives = 46/138 (33%), Gaps = 17/138 (12%) Query: 68 AAPIIVAYHFNSDLARLQKAFPQ----------GRTLDKDPCTIQEWN-EGKIPLLFAHP 116 +V H L + + T ++ + ++ + Sbjct: 463 GQKFLVFAHHQIMLNAVCNVLDKKNVKYIRIDGSTTSEQRKFFVDKFQLNDDCLVAVLSI 522 Query: 117 ASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTI 176 + G+ L +++F L W+ Q +R + G + V + YL+A T Sbjct: 523 TAANAGITLT-AAQLVLFAELHWNPSILSQA-----ESRAHRIGQQNPVIIKYLLAPGTA 576 Query: 177 DELVLQRLRTKSTIQDLL 194 D+ + L+ K I + + Sbjct: 577 DDSIWPMLQNKQKILEEV 594 >gi|153006150|ref|YP_001380475.1| non-specific serine/threonine protein kinase [Anaeromyxobacter sp. Fw109-5] gi|152029723|gb|ABS27491.1| Non-specific serine/threonine protein kinase [Anaeromyxobacter sp. Fw109-5] Length = 1002 Score = 66.1 bits (160), Expect = 3e-09, Method: Composition-based stats. Identities = 25/139 (17%), Positives = 50/139 (35%), Gaps = 18/139 (12%) Query: 66 ANAAPIIVAYHF---NSDLARLQKAFPQGRTL-------DKDPCTIQEW-NEGKIPLLFA 114 + ++V + + A L + G I + ++ + + Sbjct: 622 GDRRKVVVFSEWERMQAMAAELCERLGVGHVRLHGGVPSAARGALIDRFRDDPECRVFL- 680 Query: 115 HPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQN 174 + G GLNLQ + +V L W+ Q I R+ + G + AV V L+++ Sbjct: 681 STDAGGVGLNLQ-AASHVVNLDLPWNPAVLAQRIARV-----HRLGQREAVNVVLLVSEG 734 Query: 175 TIDELVLQRLRTKSTIQDL 193 + +E + L K + Sbjct: 735 SFEERLEATLDGKRALFAA 753 >gi|73945644|ref|XP_533438.2| PREDICTED: similar to SNF2 histone linker PHD RING helicase isoform 1 [Canis familiaris] Length = 1685 Score = 66.1 bits (160), Expect = 3e-09, Method: Composition-based stats. Identities = 30/174 (17%), Positives = 61/174 (35%), Gaps = 20/174 (11%) Query: 35 LANGAVYYDEEKHWKEVHDEKIKA----LEVIIEKANAAPIIVAYHFNSDLARLQKA--- 87 + +E+ K H K++A L I + A +V + L + KA Sbjct: 1493 FTSEKASQEEDIPVKGSHSTKVEAVVRTLMRIQLRDPGAKALVFSTWQDVLDIISKALTD 1552 Query: 88 ----FPQGRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLE 142 F Q + + + + +I +L + +GL + ++L + Sbjct: 1553 NNMEFAQISRVKTFQENLSAFKHDPQINILLLPLHTGSNGLTIIEATHVL-LVEPILNPA 1611 Query: 143 EHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLR--TKSTIQDLL 194 Q I R+ + G + V+ + + TI+E + L+ KS + Sbjct: 1612 HELQAIGRV-----HRIGQTKPTIVHRFLIKATIEERMQAMLKTAEKSHTSSSV 1660 >gi|167524411|ref|XP_001746541.1| hypothetical protein [Monosiga brevicollis MX1] gi|163774811|gb|EDQ88437.1| predicted protein [Monosiga brevicollis MX1] Length = 1057 Score = 66.1 bits (160), Expect = 3e-09, Method: Composition-based stats. Identities = 30/167 (17%), Positives = 60/167 (35%), Gaps = 19/167 (11%) Query: 48 WKEVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLA---------RLQKAFPQGRTLDK 96 +KE KI A+ I +V + L +L +G T Sbjct: 361 YKETGAAKIPAVREYIRGLCQTGDKFLVFAYHLDVLDAVHVEVVAAKLDYIMIRGDTPVS 420 Query: 97 DPCT-IQEWNEGK-IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 + ++++ + + G GL L + ++F L W +Q +R+ Sbjct: 421 ERQAGVRKFQGNDSCRVAILSMTAAGQGLTLT-AASTVIFAELHWTPGIIEQAEDRV--- 476 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 + G V V YL+A+ T+D+ + + K + L+ ++ Sbjct: 477 --HRIGQGDPVNVQYLVARRTLDDTMWNIVDRKVGVVSSALDGQRER 521 >gi|291397118|ref|XP_002714908.1| PREDICTED: SNF2 histone linker PHD RING helicase [Oryctolagus cuniculus] Length = 1688 Score = 66.1 bits (160), Expect = 3e-09, Method: Composition-based stats. Identities = 29/164 (17%), Positives = 60/164 (36%), Gaps = 18/164 (10%) Query: 35 LANGAVYYDEEKHWKEVHDEKIKA----LEVIIEKANAAPIIVAYHFNSDLARLQKA--- 87 + +E+ K H K++A L I + A +V + L + KA Sbjct: 1496 FTSEKASQEEDIPVKGSHSTKVEAVVRTLMKIQLRDPGAKALVFSTWQDVLDIISKALTD 1555 Query: 88 ----FPQGRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLE 142 F Q + + + + +I +L + +GL + ++L + Sbjct: 1556 NNMEFAQISRVKTFQENLSAFKHDPQINILLLPLHTGSNGLTIIEATHVL-LVEPILNPA 1614 Query: 143 EHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRT 186 Q I R+ + G + V+ + ++TI+E + L+T Sbjct: 1615 HELQAIGRV-----HRIGQTKPTIVHRFLIKSTIEERMQAMLKT 1653 >gi|118088342|ref|XP_419651.2| PREDICTED: similar to SNF2 histone linker PHD RING helicase [Gallus gallus] Length = 1681 Score = 66.1 bits (160), Expect = 3e-09, Method: Composition-based stats. Identities = 31/164 (18%), Positives = 59/164 (35%), Gaps = 18/164 (10%) Query: 35 LANGAVYYDEEKHWKEVHDEKIKA----LEVIIEKANAAPIIVAYHFNSDLARLQKAFPQ 90 +++ K H K++A L+ I K A +V + L + KA Sbjct: 1489 FTAETANQEDDIPVKGSHSTKVEAVVRTLKRIQFKDPGAKSLVFSTWQDVLDIIAKALYD 1548 Query: 91 GRTLDKDPCTIQEWNE--------GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLE 142 I ++ E KI +L + +GLN+ ++L + Sbjct: 1549 NNMTFSQINGISKFQENLSAFKYDPKINILLLPLHTGSNGLNIIEATHVL-LVEPILNPA 1607 Query: 143 EHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRT 186 Q I R+ + G ++ V+ + + TI+E + L+T Sbjct: 1608 HELQAIGRV-----HRIGQTKSTIVHRFLIKATIEERMQTMLKT 1646 >gi|219883019|ref|YP_002478183.1| helicase domain protein [Arthrobacter chlorophenolicus A6] gi|219862025|gb|ACL42366.1| helicase domain protein [Arthrobacter chlorophenolicus A6] Length = 762 Score = 66.1 bits (160), Expect = 3e-09, Method: Composition-based stats. Identities = 33/156 (21%), Positives = 54/156 (34%), Gaps = 21/156 (13%) Query: 40 VYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPC 99 VY W H ++AL +EKA +D G K Sbjct: 569 VYTRPLTVWVH-HQPVMQALIEAVEKAG----------IAD----AGFIDGGVAQHKRQA 613 Query: 100 TIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQA 159 + G+I ++F + G G+ L + +F W Q +R + Sbjct: 614 VADKLQNGEIGVIFCSIGAAGFGITLTASSDT-IFIETDWTPANISQAEDR-----NNRI 667 Query: 160 GFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 G V L+A NT+D + LR K+ D+++ Sbjct: 668 GQLNTCMVTTLLATNTLDAHMRAILRNKAKDLDVMM 703 >gi|193698855|ref|XP_001947409.1| PREDICTED: e3 ubiquitin-protein ligase SHPRH-like [Acyrthosiphon pisum] Length = 1178 Score = 66.1 bits (160), Expect = 3e-09, Method: Composition-based stats. Identities = 31/145 (21%), Positives = 57/145 (39%), Gaps = 18/145 (12%) Query: 48 WKEVHDEKIK----ALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQ----GRTLD---K 96 K KI+ L +I + +++ +++ L L +A Q R L K Sbjct: 1007 IKGSFSTKIESVTLKLIELITQDPNVKVLIFSNWDKALNLLGEALDQNSISYRILKPGTK 1066 Query: 97 DPCTIQEWNEGK-IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTR 155 T++++ K I L + GLNL + F + + Q I RI Sbjct: 1067 YKKTLKDFKSNKKINALLMKLSLGSKGLNLTE-ATRVFFMEPIINKADEHQAIGRI---- 1121 Query: 156 QRQAGFKRAVFVYYLIAQNTIDELV 180 + G + FV+ I +++I+E + Sbjct: 1122 -HRIGQTKPTFVHNFIIRDSIEENI 1145 >gi|211906290|gb|ACJ11663.1| putative phage-associated helicase [Candidatus Hamiltonella defensa] Length = 72 Score = 66.1 bits (160), Expect = 3e-09, Method: Composition-based stats. Identities = 21/59 (35%), Positives = 33/59 (55%), Gaps = 5/59 (8%) Query: 144 HQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKET 202 +QQ R+ + G R VF+++L+ ++ID VL+ L K Q LL+ALKK+ Sbjct: 1 YQQFNARL-----HRQGQTRPVFIHHLVMNDSIDITVLEALENKHITQKALLDALKKDI 54 >gi|212529810|ref|XP_002145062.1| helicase, putative [Penicillium marneffei ATCC 18224] gi|210074460|gb|EEA28547.1| helicase, putative [Penicillium marneffei ATCC 18224] Length = 987 Score = 66.1 bits (160), Expect = 3e-09, Method: Composition-based stats. Identities = 29/164 (17%), Positives = 55/164 (33%), Gaps = 18/164 (10%) Query: 42 YDEEKHWKEVHDEKIKAL-EVIIEKANAAPIIVAYHFNSDLARL---------QKAFPQG 91 D+ + K+ L + + N I+ + L + + A G Sbjct: 795 DDDGYLRSNGYSSKMTMLVSDVQKALNTTKSIIFSCWTRTLDLIGKHLSSANIEYARIDG 854 Query: 92 RT-LDKDPCTIQEWNE-GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIE 149 +T L + + ++ IP+L + GLNL N + W+ Q I Sbjct: 855 KTPLSQRQKILDSFDRTRNIPILIMTTGTGALGLNL-KSVNRVFIIEPQWNPAVESQAIA 913 Query: 150 RIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDL 193 R + G V V + +I+E + ++ K I + Sbjct: 914 R-----AIRLGQTEQVLVIRYHVKGSIEENMCEQQTQKLKISKM 952 >gi|301774839|ref|XP_002922838.1| PREDICTED: e3 ubiquitin-protein ligase SHPRH-like isoform 2 [Ailuropoda melanoleuca] Length = 1689 Score = 66.1 bits (160), Expect = 3e-09, Method: Composition-based stats. Identities = 29/169 (17%), Positives = 59/169 (34%), Gaps = 18/169 (10%) Query: 35 LANGAVYYDEEKHWKEVHDEKIKA----LEVIIEKANAAPIIVAYHFNSDLARLQKA--- 87 + +E+ K H K++A L I + A +V + L + KA Sbjct: 1497 FTSEKASQEEDIPVKGSHSTKVEAVVRTLMRIQLRDPGAKALVFSTWQDVLDIISKALTD 1556 Query: 88 ----FPQGRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLE 142 F Q + + + + +I +L + +GL + ++L + Sbjct: 1557 NNMEFAQISRVKTFQENLSAFKHDPQINILLLPLHTGSNGLTIIEATHVL-LVEPILNPA 1615 Query: 143 EHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQ 191 Q I R+ + G + V+ + + TI+E + L+T Sbjct: 1616 HELQAIGRV-----HRIGQTKPTIVHRFLIKATIEERMQAMLKTAEKSH 1659 >gi|301774837|ref|XP_002922837.1| PREDICTED: e3 ubiquitin-protein ligase SHPRH-like isoform 1 [Ailuropoda melanoleuca] Length = 1685 Score = 66.1 bits (160), Expect = 3e-09, Method: Composition-based stats. Identities = 29/169 (17%), Positives = 59/169 (34%), Gaps = 18/169 (10%) Query: 35 LANGAVYYDEEKHWKEVHDEKIKA----LEVIIEKANAAPIIVAYHFNSDLARLQKA--- 87 + +E+ K H K++A L I + A +V + L + KA Sbjct: 1493 FTSEKASQEEDIPVKGSHSTKVEAVVRTLMRIQLRDPGAKALVFSTWQDVLDIISKALTD 1552 Query: 88 ----FPQGRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLE 142 F Q + + + + +I +L + +GL + ++L + Sbjct: 1553 NNMEFAQISRVKTFQENLSAFKHDPQINILLLPLHTGSNGLTIIEATHVL-LVEPILNPA 1611 Query: 143 EHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQ 191 Q I R+ + G + V+ + + TI+E + L+T Sbjct: 1612 HELQAIGRV-----HRIGQTKPTIVHRFLIKATIEERMQAMLKTAEKSH 1655 >gi|281350981|gb|EFB26565.1| hypothetical protein PANDA_011861 [Ailuropoda melanoleuca] Length = 1688 Score = 66.1 bits (160), Expect = 3e-09, Method: Composition-based stats. Identities = 29/169 (17%), Positives = 59/169 (34%), Gaps = 18/169 (10%) Query: 35 LANGAVYYDEEKHWKEVHDEKIKA----LEVIIEKANAAPIIVAYHFNSDLARLQKA--- 87 + +E+ K H K++A L I + A +V + L + KA Sbjct: 1496 FTSEKASQEEDIPVKGSHSTKVEAVVRTLMRIQLRDPGAKALVFSTWQDVLDIISKALTD 1555 Query: 88 ----FPQGRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLE 142 F Q + + + + +I +L + +GL + ++L + Sbjct: 1556 NNMEFAQISRVKTFQENLSAFKHDPQINILLLPLHTGSNGLTIIEATHVL-LVEPILNPA 1614 Query: 143 EHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQ 191 Q I R+ + G + V+ + + TI+E + L+T Sbjct: 1615 HELQAIGRV-----HRIGQTKPTIVHRFLIKATIEERMQAMLKTAEKSH 1658 >gi|296199407|ref|XP_002747128.1| PREDICTED: E3 ubiquitin-protein ligase SHPRH, partial [Callithrix jacchus] Length = 1681 Score = 66.1 bits (160), Expect = 3e-09, Method: Composition-based stats. Identities = 29/164 (17%), Positives = 59/164 (35%), Gaps = 18/164 (10%) Query: 35 LANGAVYYDEEKHWKEVHDEKIKA----LEVIIEKANAAPIIVAYHFNSDLARLQKA--- 87 + +E+ K H K++A L I + A +V + L + KA Sbjct: 1496 FTSEKASQEEDIPVKGSHSTKVEAVVRTLMKIQLRDPGAKALVFSTWQDVLDIISKALTD 1555 Query: 88 ----FPQGRTLDKDPCTIQEW-NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLE 142 F Q + + + + +I +L + +GL + ++L + Sbjct: 1556 NNMEFAQISRVKTFQENLSAFKRDPQINILLLPLHTGSNGLTIIEATHVL-LVEPILNPA 1614 Query: 143 EHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRT 186 Q I R+ + G + V+ + + TI+E + L+T Sbjct: 1615 HELQAIGRV-----HRIGQTKPTIVHRFLIKATIEERMQAMLKT 1653 >gi|120536993|ref|YP_957051.1| helicase domain-containing protein [Marinobacter aquaeolei VT8] gi|120326827|gb|ABM21136.1| helicase domain protein [Marinobacter aquaeolei VT8] Length = 906 Score = 66.1 bits (160), Expect = 3e-09, Method: Composition-based stats. Identities = 21/102 (20%), Positives = 38/102 (37%), Gaps = 6/102 (5%) Query: 96 KDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTR 155 + + ++ + + + G GL L ++F L W Q +R Sbjct: 739 RQAQADRFQSDEQCKVFVGTIQAAGVGLTLT-AAQTVLFAELDWVPGNMNQAEDR----- 792 Query: 156 QRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + G V VY+ + +ID +++RL K D L A Sbjct: 793 AHRIGQLDHVLVYHTAVEGSIDTQMIRRLIEKQQTIDEALEA 834 >gi|330794038|ref|XP_003285088.1| hypothetical protein DICPUDRAFT_148935 [Dictyostelium purpureum] gi|325085011|gb|EGC38427.1| hypothetical protein DICPUDRAFT_148935 [Dictyostelium purpureum] Length = 232 Score = 66.1 bits (160), Expect = 3e-09, Method: Composition-based stats. Identities = 25/167 (14%), Positives = 55/167 (32%), Gaps = 36/167 (21%) Query: 39 AVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDP 98 +Y D + L ++++ + ++ + S L + Sbjct: 90 PIYDSSNWKCSTKIDSLLDELNIVLKNEPDSKCLIFSQWTSMLDLI-------------- 135 Query: 99 CTIQEWNEGKIPLLFAH-PASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 IPL P G + WW+ +Q I+R+ Sbjct: 136 ---------DIPLNINSMPWWIGFKF------SCCFTCDPWWNPATEEQAIDRV-----Y 175 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIH 204 + G + V V + +++I+E +L+ ++K + L +KK+ Sbjct: 176 RIGQNKNVNVIRFLIKDSIEEKILELQKSKKDLAKEAL-TMKKQPQQ 221 >gi|167037341|ref|YP_001664919.1| helicase domain-containing protein [Thermoanaerobacter pseudethanolicus ATCC 33223] gi|320115757|ref|YP_004185916.1| helicase domain-containing protein [Thermoanaerobacter brockii subsp. finnii Ako-1] gi|166856175|gb|ABY94583.1| helicase domain protein [Thermoanaerobacter pseudethanolicus ATCC 33223] gi|319928848|gb|ADV79533.1| helicase domain protein [Thermoanaerobacter brockii subsp. finnii Ako-1] Length = 894 Score = 66.1 bits (160), Expect = 3e-09, Method: Composition-based stats. Identities = 33/150 (22%), Positives = 64/150 (42%), Gaps = 23/150 (15%) Query: 53 DEKIKALEVIIEKA-----NAAPIIVAYHFNSDLARLQKAFP----QGRTLD------KD 97 D K + L I++ N+ IV F + L+ + L+ + Sbjct: 452 DAKAEVLIDFIDQLSMEYKNSQKFIVFTEFLATQQYLKDFLESKGYKVAILNGSMSMEER 511 Query: 98 PCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 +++E+ K + + G GLNLQ+ NI++ + L W+ + +Q I R+ Sbjct: 512 DASLKEFKNYKD--VLISTDAGGEGLNLQF-CNIVINYDLPWNPMKIEQRIGRVD----- 563 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTK 187 + G +R V V + ++T++ V + L K Sbjct: 564 RIGQERDVLVLNFMLKDTVEFRVREVLEEK 593 >gi|330844016|ref|XP_003293935.1| hypothetical protein DICPUDRAFT_99797 [Dictyostelium purpureum] gi|325075687|gb|EGC29545.1| hypothetical protein DICPUDRAFT_99797 [Dictyostelium purpureum] Length = 1247 Score = 65.7 bits (159), Expect = 3e-09, Method: Composition-based stats. Identities = 26/150 (17%), Positives = 55/150 (36%), Gaps = 24/150 (16%) Query: 49 KEVHDEKIKALEVIIEKANAA----PIIVAYHFNSDLARLQKAFP------------QGR 92 +E K++ L +E+ +A IV FN L ++ + Sbjct: 1005 EEFKSCKLEYLIQRLEELDAKEDPIKTIVFTQFNETLYEIEWSLKFKTNLKYLVYNTHQS 1064 Query: 93 TLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLW--WDLEEHQQMIER 150 ++ ++ + +G+NL N ++F W++ + +Q I+R Sbjct: 1065 LRERSSTINSFQTNQDYKIIVMNVDLAAYGINLT-AANHIIFVDPIPIWNISKERQAIKR 1123 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELV 180 + G + V V LI N+I++ + Sbjct: 1124 -----AHRIGQTKPVTVEKLIINNSIEQTL 1148 >gi|193785257|dbj|BAG54410.1| unnamed protein product [Homo sapiens] Length = 882 Score = 65.7 bits (159), Expect = 3e-09, Method: Composition-based stats. Identities = 29/164 (17%), Positives = 59/164 (35%), Gaps = 18/164 (10%) Query: 35 LANGAVYYDEEKHWKEVHDEKIKA----LEVIIEKANAAPIIVAYHFNSDLARLQKA--- 87 + +E+ K H K++A L I + A +V + L + KA Sbjct: 690 FTSEKANQEEDIPVKGSHSTKVEAVVRTLMKIQLRDPGAKALVFSTWQDVLDIISKALTD 749 Query: 88 ----FPQGRTLDKDPCTIQEW-NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLE 142 F Q + + + + +I +L + +GL + ++L + Sbjct: 750 NNMEFAQISRVKTFQENLSAFKRDPQINILLLPLHTGSNGLTIIEATHVL-LVEPILNPA 808 Query: 143 EHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRT 186 Q I R+ + G + V+ + + TI+E + L+T Sbjct: 809 HELQAIGRV-----HRIGQTKPTIVHRFLIKATIEERMQAMLKT 847 >gi|73945646|ref|XP_861216.1| PREDICTED: similar to SNF2 histone linker PHD RING helicase isoform 3 [Canis familiaris] Length = 1575 Score = 65.7 bits (159), Expect = 3e-09, Method: Composition-based stats. Identities = 30/174 (17%), Positives = 61/174 (35%), Gaps = 20/174 (11%) Query: 35 LANGAVYYDEEKHWKEVHDEKIKA----LEVIIEKANAAPIIVAYHFNSDLARLQKA--- 87 + +E+ K H K++A L I + A +V + L + KA Sbjct: 1383 FTSEKASQEEDIPVKGSHSTKVEAVVRTLMRIQLRDPGAKALVFSTWQDVLDIISKALTD 1442 Query: 88 ----FPQGRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLE 142 F Q + + + + +I +L + +GL + ++L + Sbjct: 1443 NNMEFAQISRVKTFQENLSAFKHDPQINILLLPLHTGSNGLTIIEATHVL-LVEPILNPA 1501 Query: 143 EHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLR--TKSTIQDLL 194 Q I R+ + G + V+ + + TI+E + L+ KS + Sbjct: 1502 HELQAIGRV-----HRIGQTKPTIVHRFLIKATIEERMQAMLKTAEKSHTSSSV 1550 >gi|302885904|ref|XP_003041843.1| hypothetical protein NECHADRAFT_53012 [Nectria haematococca mpVI 77-13-4] gi|256722749|gb|EEU36130.1| hypothetical protein NECHADRAFT_53012 [Nectria haematococca mpVI 77-13-4] Length = 687 Score = 65.7 bits (159), Expect = 3e-09, Method: Composition-based stats. Identities = 28/120 (23%), Positives = 45/120 (37%), Gaps = 19/120 (15%) Query: 72 IVAYHFNSDLARLQKAF---------PQGRT-LDKDPCTIQEWN---EGKIPLLFAHPAS 118 IV + S L L++ GR + ++++ E IP+L + Sbjct: 571 IVFTAWRSTLDLLERMLTENGIQCRRIDGRVSISDRTERLKDFQFDPENSIPVLLLSIET 630 Query: 119 CGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDE 178 GL L + + W+ QQ I R + G KR V + I QNT++E Sbjct: 631 GAVGLTLT-AADRVHIVEPQWNPSVEQQAIGR-----ALRIGQKRKVTIVKYIVQNTVEE 684 >gi|295829290|gb|ADG38314.1| AT2G46020-like protein [Neslia paniculata] Length = 201 Score = 65.7 bits (159), Expect = 3e-09, Method: Composition-based stats. Identities = 24/108 (22%), Positives = 43/108 (39%), Gaps = 16/108 (14%) Query: 82 ARLQKAFPQGRT-LDKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLW 138 RL G T L+ I ++N+ + + G GLNLQ + +V + Sbjct: 15 RRLVYRRIDGTTSLEDRESAIVDFNDPDTDCFIFLLSIRAAGRGLNLQT-ADTVVIYDPD 73 Query: 139 WDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRT 186 + + +Q + R + G R V V Y+ E V+++L + Sbjct: 74 PNPKNEEQAVAR-----AHRIGQTREVKVIYM-------EAVVEKLSS 109 >gi|242080501|ref|XP_002445019.1| hypothetical protein SORBIDRAFT_07g002945 [Sorghum bicolor] gi|241941369|gb|EES14514.1| hypothetical protein SORBIDRAFT_07g002945 [Sorghum bicolor] Length = 749 Score = 65.7 bits (159), Expect = 3e-09, Method: Composition-based stats. Identities = 32/154 (20%), Positives = 58/154 (37%), Gaps = 24/154 (15%) Query: 55 KIKALEVIIEKAN--AAPIIVAYHF---NSDLARL---QKAFPQGRTL----------DK 96 K I+ AN ++ + RL K + G+ + D+ Sbjct: 556 KANFFMNILSLANSAGEKVLAFSQYILPMKFFERLLVKMKGWHVGKEIFMISGDTSQEDR 615 Query: 97 DPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 + N +LF +CG G++L G + +V + + +Q I R Sbjct: 616 EVAVDHFNNSADAKVLFGSIKACGEGISL-VGASRVVILDVHLNPSVTRQAIGR-----A 669 Query: 157 RQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 + G ++ VFVY L+A ++ +E V + K I Sbjct: 670 FRPGQQKKVFVYRLVAADSDEEKVHETAFKKEVI 703 >gi|52545910|emb|CAE45796.2| hypothetical protein [Homo sapiens] Length = 192 Score = 65.7 bits (159), Expect = 3e-09, Method: Composition-based stats. Identities = 19/53 (35%), Positives = 31/53 (58%), Gaps = 2/53 (3%) Query: 154 TRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA--LKKETIH 204 R + G + V VY LI + TI+E +LQR + KS IQ ++++ K +T+ Sbjct: 2 DRAHRLGQTKQVTVYRLICKGTIEERILQRAKEKSEIQRMVISGGNFKPDTLK 54 >gi|195437364|ref|XP_002066610.1| GK24475 [Drosophila willistoni] gi|194162695|gb|EDW77596.1| GK24475 [Drosophila willistoni] Length = 734 Score = 65.7 bits (159), Expect = 3e-09, Method: Composition-based stats. Identities = 23/143 (16%), Positives = 49/143 (34%), Gaps = 19/143 (13%) Query: 59 LEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRT----------LDKDPCTIQEWNEGK 108 L+ +I++ I+ H L + + D ++ + + Sbjct: 515 LKTLIKE--KIKFIIFAHHRIMLDAICDCLSTLKVHYIRIDGSTRSDLRADFVETFQKKS 572 Query: 109 -IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFV 167 + +C G+ L +++F L W+ Q +R + G + V Sbjct: 573 SCQVAVLSLKACNSGITLT-AAEMIIFAELDWNPSTLAQA-----ESRAHRIGQTKPVIC 626 Query: 168 YYLIAQNTIDELVLQRLRTKSTI 190 YL+A T D+ + L+ K + Sbjct: 627 RYLMAHQTADDTIWNMLKAKQDV 649 >gi|289580072|ref|YP_003478538.1| helicase [Natrialba magadii ATCC 43099] gi|289529625|gb|ADD03976.1| helicase domain protein [Natrialba magadii ATCC 43099] Length = 584 Score = 65.7 bits (159), Expect = 3e-09, Method: Composition-based stats. Identities = 41/152 (26%), Positives = 67/152 (44%), Gaps = 24/152 (15%) Query: 54 EKIKALEVIIEKANAA----PIIVAYHFNSD----LARLQ------KAFPQGRTLDKDPC 99 K + L I+E+A +IV F + L RL AF G + + Sbjct: 364 TKQERLLDIVEEARDNVEMGRVIVFTQFRATQRQVLDRLASEGYTVHAFHGGHSSSEKEK 423 Query: 100 TIQEWNE-GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQ 158 ++ + E G I + G NLQ+ N+LV L W+ +Q I R+ + Sbjct: 424 IVKNFEEEGGI---LVSTDAMSEGRNLQF-CNLLVNMDLPWNPMRVEQRIGRV-----HR 474 Query: 159 AGFKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 G KR VF++ + ++T++E VL+RL K + Sbjct: 475 IGQKRDVFIFNMALKDTVEEYVLERLYHKIDL 506 >gi|322825950|gb|EFZ30762.1| DNA helicase, putative [Trypanosoma cruzi] Length = 914 Score = 65.7 bits (159), Expect = 3e-09, Method: Composition-based stats. Identities = 31/169 (18%), Positives = 59/169 (34%), Gaps = 27/169 (15%) Query: 49 KEVHDEKIKALEVIIEKAN------AAPIIVAYHFNSDLARLQKAFPQGRTLD------- 95 KI A++ ++ +I+ H + +++A + Sbjct: 465 IATARAKIAAVQDYVKSTTEQMVESGQKVIIFAHHQCMMEAIREAVESVQPKQPLDYIYI 524 Query: 96 --------KDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQM 147 ++ T + SCG G NL ++VF L W+ H Q Sbjct: 525 TGETPAAQREALTTHFRTSTNCHVAVLSMHSCGVGHNLTC-ATMVVFAELDWNPSTHLQC 583 Query: 148 IERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 +R+ + G A + YL+A+ T D ++ L+TK + +L Sbjct: 584 EDRV-----HRMGQSSACVIKYLLAEGTSDSVIWPMLQTKLNVTHAVLE 627 >gi|71648872|ref|XP_813216.1| DNA helicase [Trypanosoma cruzi strain CL Brener] gi|70878080|gb|EAN91365.1| DNA helicase, putative [Trypanosoma cruzi] Length = 744 Score = 65.7 bits (159), Expect = 3e-09, Method: Composition-based stats. Identities = 31/169 (18%), Positives = 59/169 (34%), Gaps = 27/169 (15%) Query: 49 KEVHDEKIKALEVIIEKAN------AAPIIVAYHFNSDLARLQKAFPQGRTLD------- 95 KI A++ ++ +I+ H + +++A + Sbjct: 295 IATARAKIAAVQDYVKSTTEQMVESGQKVIIFAHHQCMMEAIREAVESVQPKQPLDYIYI 354 Query: 96 --------KDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQM 147 ++ T + SCG G NL ++VF L W+ H Q Sbjct: 355 TGETPAAQREALTTHFRTSTNCHVAVLSMHSCGVGHNLTC-ATMVVFAELDWNPSTHLQC 413 Query: 148 IERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 +R+ + G A + YL+A+ T D ++ L+TK + +L Sbjct: 414 EDRV-----HRMGQSSACVIKYLLAEGTSDSVIWPMLQTKLNVTHAVLE 457 >gi|71653795|ref|XP_815529.1| DNA helicase [Trypanosoma cruzi strain CL Brener] gi|70880590|gb|EAN93678.1| DNA helicase, putative [Trypanosoma cruzi] Length = 938 Score = 65.7 bits (159), Expect = 3e-09, Method: Composition-based stats. Identities = 31/169 (18%), Positives = 59/169 (34%), Gaps = 27/169 (15%) Query: 49 KEVHDEKIKALEVIIEKAN------AAPIIVAYHFNSDLARLQKAFPQGRTLD------- 95 KI A++ ++ +I+ H + +++A + Sbjct: 489 IATARAKIAAVQDYVKSTTEQMVESGQKVIIFAHHQCMMEAIREAVESVQPKQPLDYIYI 548 Query: 96 --------KDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQM 147 ++ T + SCG G NL ++VF L W+ H Q Sbjct: 549 TGETPAAQREALTTHFRTSTNCHVAVLSMHSCGVGHNLTC-ATMVVFAELDWNPSTHLQC 607 Query: 148 IERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 +R+ + G A + YL+A+ T D ++ L+TK + +L Sbjct: 608 EDRV-----HRMGQSSACVIKYLLAEGTSDSVIWPMLQTKLNVTHAVLE 651 >gi|284048597|ref|YP_003398936.1| SNF2-related protein [Acidaminococcus fermentans DSM 20731] gi|283952818|gb|ADB47621.1| SNF2-related protein [Acidaminococcus fermentans DSM 20731] Length = 969 Score = 65.7 bits (159), Expect = 3e-09, Method: Composition-based stats. Identities = 21/80 (26%), Positives = 37/80 (46%), Gaps = 7/80 (8%) Query: 97 DPCTIQEWNEGK-IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTR 155 + ++N+ +L P + G GLN+ G N ++ S W+ + Q +R Sbjct: 847 RQKMVNQFNQASGFQVLLLSPEAAGVGLNIT-GANHVIHLSRCWNPAKEDQATDR----- 900 Query: 156 QRQAGFKRAVFVYYLIAQNT 175 + G K+AV VY +A +T Sbjct: 901 AYRIGQKKAVTVYLPMAVDT 920 >gi|147676740|ref|YP_001210955.1| hypothetical protein PTH_0405 [Pelotomaculum thermopropionicum SI] gi|146272837|dbj|BAF58586.1| hypothetical protein [Pelotomaculum thermopropionicum SI] Length = 82 Score = 65.7 bits (159), Expect = 3e-09, Method: Composition-based stats. Identities = 16/66 (24%), Positives = 30/66 (45%), Gaps = 5/66 (7%) Query: 132 LVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQ 191 ++ + LWW+ Q +R + G R V V+ LI+ T +E + + +K + Sbjct: 1 MIHYDLWWNPAVEDQATDR-----TYRIGQTRTVMVHRLISLGTFEEKINTMMASKRELA 55 Query: 192 DLLLNA 197 L + A Sbjct: 56 GLTVAA 61 >gi|76154388|gb|AAX25878.2| SJCHGC08203 protein [Schistosoma japonicum] Length = 190 Score = 65.7 bits (159), Expect = 3e-09, Method: Composition-based stats. Identities = 24/132 (18%), Positives = 46/132 (34%), Gaps = 20/132 (15%) Query: 45 EKHWKEVHDEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQKAFP---------QGRT 93 E K + L+ I+ K +++ S + +Q F G T Sbjct: 58 EGKILYRSSGKFELLDRILPKLKCCGHRVLIFCQMTSLMTIMQDYFDYRNFRYLRLDGTT 117 Query: 94 LDKDP-CTIQEWNE--GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 +D + ++N+ I + + G GLNLQ + ++ F W+ + Q Sbjct: 118 RSEDRGELLVKFNDTSEDIFIFLLSTRAGGLGLNLQ-AADTVIIFDSDWNPHQDLQA--- 173 Query: 151 IGVTRQRQAGFK 162 R + G + Sbjct: 174 --QDRAHRIGQQ 183 >gi|323448244|gb|EGB04145.1| hypothetical protein AURANDRAFT_39147 [Aureococcus anophagefferens] Length = 684 Score = 65.7 bits (159), Expect = 4e-09, Method: Composition-based stats. Identities = 27/141 (19%), Positives = 52/141 (36%), Gaps = 16/141 (11%) Query: 57 KALEVIIEKANAAPIIVAYHFN--------SDLARLQKAFPQGRT--LDKDPCTIQEWNE 106 L + E+ + ++V H L ++ G T D+ N+ Sbjct: 546 DLLHGVDEERFSGKMLVFAHHRKVLDTLANGILRDIKYIRIDGTTPAKDRQSRVTTFQND 605 Query: 107 GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVF 166 K+ + + G L L + ++F L+W Q +R + G V Sbjct: 606 AKVRVALLGITAAGIALTLT-AASRVIFTELYWTPAALLQAEDR-----AHRIGQTSEVV 659 Query: 167 VYYLIAQNTIDELVLQRLRTK 187 V YL+A + +DE++ ++ K Sbjct: 660 VEYLLADDCVDEILWPLIQHK 680 >gi|13905182|gb|AAH06883.1| Shprh protein [Mus musculus] Length = 581 Score = 65.7 bits (159), Expect = 4e-09, Method: Composition-based stats. Identities = 28/164 (17%), Positives = 56/164 (34%), Gaps = 18/164 (10%) Query: 35 LANGAVYYDEEKHWKEVHDEKIKA----LEVIIEKANAAPIIVAYHFNSDLARLQKAFPQ 90 + +++ K H K++A L I + A +V + L + KA Sbjct: 389 FTSEKANQEDDIPVKGSHSTKVEAVVRTLMKIQLRDPGAKALVFSTWQDVLDIISKALTD 448 Query: 91 GRTLDKDPCTIQEWNE--------GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLE 142 I+ + E I +L + +GL + ++L + Sbjct: 449 NNMEFTQISRIKTFQENLSAFKYDPHINILLLPLHTGSNGLTIIEATHVL-LVEPILNPA 507 Query: 143 EHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRT 186 Q I R+ + G + V+ + + TI+E + L+T Sbjct: 508 HELQAIGRV-----HRIGQTKPTIVHRFLIKATIEERMQAMLKT 546 >gi|302687500|ref|XP_003033430.1| hypothetical protein SCHCODRAFT_15473 [Schizophyllum commune H4-8] gi|300107124|gb|EFI98527.1| hypothetical protein SCHCODRAFT_15473 [Schizophyllum commune H4-8] Length = 2254 Score = 65.7 bits (159), Expect = 4e-09, Method: Composition-based stats. Identities = 25/159 (15%), Positives = 54/159 (33%), Gaps = 14/159 (8%) Query: 58 ALEVIIEKANAAP----IIVAYHFNS---------DLARLQKAFPQGRTLDKDPCTIQEW 104 LE +++ N P +++ F D ++ +G + + Sbjct: 2090 KLEEVVKLINGLPKNERVLLFVQFADLTKKVSEALDYHKIPHLEIKGSASARSTALDKFQ 2149 Query: 105 NEGKIPLLFAHPA-SCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKR 163 N K +L + G NL + + L ++ Q E V R + G ++ Sbjct: 2150 NGSKERVLLLNVRDESASGANLTCANHAIFLSPLHAPTKDLYQAWETQAVGRVVRYGQQK 2209 Query: 164 AVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKET 202 V ++ I +TID + ++ Q + + + Sbjct: 2210 PVQIHRFITMDTIDSEIFEKQHADLAQQGKAIEDVTRAV 2248 >gi|297663946|ref|XP_002810426.1| PREDICTED: transcription termination factor 2-like [Pongo abelii] Length = 1159 Score = 65.7 bits (159), Expect = 4e-09, Method: Composition-based stats. Identities = 24/158 (15%), Positives = 54/158 (34%), Gaps = 24/158 (15%) Query: 53 DEKIKALEVIIEKANAAPIIVAYHFNSDLA----RLQKAFPQGRTLDKDPCT------IQ 102 + LE I + + ++ + + L L+K T+D ++ Sbjct: 994 SSLLAELEAIQRNSASQKSVIVSQWTNMLKVVALHLKKHGLTYATIDGSVNPKQRMDLVE 1053 Query: 103 EWNEGKIPLLFAHPASCGHGLNLQYGGNILV---FFSLWWDLEEHQQMIERIGVTRQRQA 159 +N + P + + L FS + Q +RI + Sbjct: 1054 AFNHSR------GPQVQAESIAFLMAKSYLAQFYHFSRILNPSLEDQACDRI-----YRV 1102 Query: 160 GFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 G ++ V ++ + + T++E +LQ K + +L+ Sbjct: 1103 GQQKDVVIHKFVCEGTVEEKILQLQEKKKDLAKQVLSG 1140 >gi|212542133|ref|XP_002151221.1| SNF2 family helicase, putative [Penicillium marneffei ATCC 18224] gi|210066128|gb|EEA20221.1| SNF2 family helicase, putative [Penicillium marneffei ATCC 18224] Length = 1209 Score = 65.7 bits (159), Expect = 4e-09, Method: Composition-based stats. Identities = 29/177 (16%), Positives = 62/177 (35%), Gaps = 28/177 (15%) Query: 44 EEKHWKEVHDEKIKALEVIIEKANAA-PIIVAYHFNSDLARLQKAFP--------QGRTL 94 + K+ L +++ + II+ Y N+ + + TL Sbjct: 890 SQTKLVATTSAKLTYLLDRVQELHKEEKIIIFYENNNTAFWIAEGLELLGIDFRIYANTL 949 Query: 95 DKDPCT--IQEWNEGK-IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERI 151 + + E + +L HGL++ + + + W Q I+R Sbjct: 950 KTSQKAAYLSLFEESSSVRILLMDLRQASHGLHI-ASASRVFIVNPIWRPYVESQAIKR- 1007 Query: 152 GVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLR----------TKSTIQDLLLNAL 198 + G R VFV L+ ++T++E +L R + K + D ++++ Sbjct: 1008 ----AHRIGQTRPVFVETLVLKDTLEEKMLHRRQEMSNSEMQHAEKDMLDDSAMSSI 1060 >gi|39935287|ref|NP_947563.1| ATP-dependent RNA helicase [Rhodopseudomonas palustris CGA009] gi|39649139|emb|CAE27659.1| possible ATP-dependent RNA helicase [Rhodopseudomonas palustris CGA009] Length = 1172 Score = 65.7 bits (159), Expect = 4e-09, Method: Composition-based stats. Identities = 38/210 (18%), Positives = 80/210 (38%), Gaps = 30/210 (14%) Query: 1 MKQYHKFQRELYCDLQGENIEAFNSA---------SKTVKCLQ-LANGAVYYDEEKHWKE 50 +K ++ ++ DL+ +A +T+K L+ +A G + + W + Sbjct: 430 LKNIEEYGQDEIDDLEDLIATGATTAETVEQLALEVETLKGLETMALGVLRSGLDAKWTQ 489 Query: 51 VHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFP-------------QGRTLDKD 97 ++ L + N +I+ L L G + ++ Sbjct: 490 LNRILDDDLM-VDADGNRRKLIIFTEPKDTLHYLVDKVRARLGNPDAVDVIHGGVSREER 548 Query: 98 PCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 I+ + + + L+ + G G+NLQ G +++V + L W+ + +Q RI Sbjct: 549 RKVIERFMQDRDMLVLIANDAAGEGVNLQRG-HLMVNYDLPWNPNKIEQRFGRI-----H 602 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTK 187 + G ++ L+A +T + V RL K Sbjct: 603 RIGQTEVCHLWNLVAADTREGEVYARLLEK 632 >gi|326480935|gb|EGE04945.1| hypothetical protein TEQG_03790 [Trichophyton equinum CBS 127.97] Length = 1000 Score = 65.7 bits (159), Expect = 4e-09, Method: Composition-based stats. Identities = 29/177 (16%), Positives = 64/177 (36%), Gaps = 34/177 (19%) Query: 47 HWKEVHDEKIK-ALEVIIEKANAAPIIVAY-------HFNSDLA------RLQKAFPQGR 92 K+ LE +++ + II+ Y L R+ + Sbjct: 698 KVIGTVSAKLSYLLEKVLQFQDTEKIIIFYESENTAFWIAEGLELVGTDFRIYAHTLKAS 757 Query: 93 TLDKDPCTIQEWNEGK-IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERI 151 + +NEG+ + +L HGL++ + + + WD Q I+R Sbjct: 758 QK---SEYLSTFNEGESVRVLLMDLRQASHGLHI-ASASRVYIVNPIWDPNIESQAIKR- 812 Query: 152 GVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLR----------TKSTIQDLLLNAL 198 + R V+V L+ ++T+++ +L+R + K + D ++++ Sbjct: 813 ----AHRISQTRPVYVETLVLKDTLEDKMLRRRKAMTSVEMQHAEKDMLNDGTMSSI 865 >gi|326473936|gb|EGD97945.1| hypothetical protein TESG_05245 [Trichophyton tonsurans CBS 112818] Length = 1168 Score = 65.7 bits (159), Expect = 4e-09, Method: Composition-based stats. Identities = 29/177 (16%), Positives = 64/177 (36%), Gaps = 34/177 (19%) Query: 47 HWKEVHDEKIK-ALEVIIEKANAAPIIVAY-------HFNSDLA------RLQKAFPQGR 92 K+ LE +++ + II+ Y L R+ + Sbjct: 866 KVIGTVSAKLSYLLEKVLQFQDTEKIIIFYESENTAFWIAEGLELVGTDFRIYAHTLKAS 925 Query: 93 TLDKDPCTIQEWNEGK-IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERI 151 + +NEG+ + +L HGL++ + + + WD Q I+R Sbjct: 926 QK---SEYLSTFNEGESVRVLLMDLRQASHGLHI-ASASRVYIVNPIWDPNIESQAIKR- 980 Query: 152 GVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLR----------TKSTIQDLLLNAL 198 + R V+V L+ ++T+++ +L+R + K + D ++++ Sbjct: 981 ----AHRISQTRPVYVETLVLKDTLEDKMLRRRKAMTSVEMQHAEKDMLNDGTMSSI 1033 >gi|50550555|ref|XP_502750.1| YALI0D12562p [Yarrowia lipolytica] gi|49648618|emb|CAG80938.1| YALI0D12562p [Yarrowia lipolytica] Length = 1098 Score = 65.7 bits (159), Expect = 4e-09, Method: Composition-based stats. Identities = 36/193 (18%), Positives = 67/193 (34%), Gaps = 26/193 (13%) Query: 10 ELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEK-HWKEVHDEKIKAL--EVIIEKA 66 E Y + G +E+ + + QL A Y +K K+ L + ++ Sbjct: 812 EEYLESVGLKVESAPTGAPQNHHSQL--EADYPVSDKPTIVGTGSSKLSYLVSKTLV-LV 868 Query: 67 NAAPIIVAYHFNSD------------LARLQKAFPQGRTLDKDPCTIQEWNEGKI-PLLF 113 IIV Y + L + ++ + + +L Sbjct: 869 KDHKIIVFYEDVDSAVAVAEAFEAVGIKHLIYTTDKVS-KERRAQYLATFEATDNFQVLL 927 Query: 114 AHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQ 173 + + HGLN+ + + F S W + Q I+R + G K V V L+ Q Sbjct: 928 MNINAAAHGLNIT-SASWVFFLSPVWRRDIEAQAIKR-----AHRIGQKSEVHVETLVLQ 981 Query: 174 NTIDELVLQRLRT 186 +T++E + +R Sbjct: 982 DTLEEDIYRRRTE 994 >gi|15226547|ref|NP_179740.1| CHR34 (chromatin remodeling 34); ATP binding / DNA binding / helicase/ nucleic acid binding [Arabidopsis thaliana] gi|4567276|gb|AAD23689.1| hypothetical protein [Arabidopsis thaliana] gi|330252085|gb|AEC07179.1| chromatin remodeling 34 [Arabidopsis thaliana] Length = 816 Score = 65.7 bits (159), Expect = 4e-09, Method: Composition-based stats. Identities = 26/148 (17%), Positives = 53/148 (35%), Gaps = 22/148 (14%) Query: 65 KANAAPIIVAYHFN---SDLARLQKAFPQGR-------TLDKDPCTIQEW------NEGK 108 ++ ++V + L RL + R +EW N + Sbjct: 633 ESTGEKLLVFSQYIVPIKTLERLMSSMKGWRLGKEMFTITGDSSNEQREWSMERFNNSLE 692 Query: 109 IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVY 168 + F +CG G++L G + ++ + + QQ + R + G KR V+ Y Sbjct: 693 AKVFFGSIKACGEGISL-VGASRVLILDVHLNPSVTQQAVAR-----AYRPGQKRKVYAY 746 Query: 169 YLIAQNTIDELVLQRLRTKSTIQDLLLN 196 L+A ++ +E + K + + Sbjct: 747 KLVAADSPEEENYETCTRKEMMSKMWFE 774 >gi|189241979|ref|XP_967778.2| PREDICTED: similar to TBC1D12: TBC1 domain family, member 12 [Tribolium castaneum] Length = 572 Score = 65.7 bits (159), Expect = 4e-09, Method: Composition-based stats. Identities = 16/67 (23%), Positives = 31/67 (46%), Gaps = 5/67 (7%) Query: 129 GNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKS 188 + ++F W+ Q +R + G + V VY L+ + TIDE++L R K Sbjct: 449 ADTVIFMDRDWNPMVDLQAQDRC-----HRIGQTKPVMVYSLVTKGTIDEIILNRADVKK 503 Query: 189 TIQDLLL 195 + +++ Sbjct: 504 RLGKVVI 510 >gi|15425711|dbj|BAB64333.1| hypothetical protein [Streptomyces griseus] Length = 724 Score = 65.7 bits (159), Expect = 4e-09, Method: Composition-based stats. Identities = 20/121 (16%), Positives = 47/121 (38%), Gaps = 15/121 (12%) Query: 71 IIVAYHFNSDLARLQKAF--------PQGRTLDKDPCTIQEWNEGK-IPLLFAHPASCGH 121 ++V +F LA + +A + + ++ +L + + G Sbjct: 558 VVVFSYFREVLATVGEALGPDAFGPLSGSVAPARRQELVDAFSAVDGHAVLLSQIQAGGT 617 Query: 122 GLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVL 181 GLN+Q ++++ Q + R + G R V V+ L+A +++D+ ++ Sbjct: 618 GLNMQ-AASVVILCEPQIKPTLEHQAVAR-----AHRMGQVRPVQVHRLLATDSVDQRLV 671 Query: 182 Q 182 Sbjct: 672 D 672 >gi|311243824|ref|XP_001924825.2| PREDICTED: e3 ubiquitin-protein ligase SHPRH [Sus scrofa] Length = 1685 Score = 65.7 bits (159), Expect = 4e-09, Method: Composition-based stats. Identities = 29/164 (17%), Positives = 59/164 (35%), Gaps = 18/164 (10%) Query: 35 LANGAVYYDEEKHWKEVHDEKIKA----LEVIIEKANAAPIIVAYHFNSDLARLQKA--- 87 + +E+ K H K++A L I + A +V + L + KA Sbjct: 1493 FTSEKASQEEDIPVKGSHSTKVEAVVRTLMRIQLRDPGAKALVFSTWQDVLDIISKALTD 1552 Query: 88 ----FPQGRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLE 142 F Q + + + + +I +L + +GL + ++L + Sbjct: 1553 NNMEFAQISRVKTFQENLSAFKHDPQINILLLPLHTGSNGLTIIEATHVL-LVEPILNPA 1611 Query: 143 EHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRT 186 Q I R+ + G + V+ + + TI+E + L+T Sbjct: 1612 HELQAIGRV-----HRIGQTKPTIVHRFLIKATIEERMQAMLKT 1650 >gi|270001791|gb|EEZ98238.1| hypothetical protein TcasGA2_TC000677 [Tribolium castaneum] Length = 1345 Score = 65.7 bits (159), Expect = 4e-09, Method: Composition-based stats. Identities = 30/169 (17%), Positives = 60/169 (35%), Gaps = 26/169 (15%) Query: 35 LANGAVYYDEEKHWKEVHDEKI-----KALEVIIE-------KANAAPIIVAYHFNSDLA 82 L + Y +H EKI +E I+ + I++ + L+ Sbjct: 1145 LTSEISYIKPGEHQTVPESEKIAGNYSTKVESIVRLILKLRLEDEDVKILLFSTWIPVLS 1204 Query: 83 RLQKAFPQGR------TLDKDPCTIQEWNEGK--IPLLFAHPASCGHGLNLQYGGNILVF 134 +++A + T I+++ + I +L G GLNL + ++ Sbjct: 1205 YIREALTKNSVTSELITSGNLEKQIEKFKDADQNITVLLLPINLGGKGLNLIEATH-VIL 1263 Query: 135 FSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQR 183 + E Q I R+ + G R V+ ++TI+E + + Sbjct: 1264 TEPLLNPGEELQAIGRV-----HRIGQTRPTVVHKFFIKHTIEESIQKA 1307 >gi|170114873|ref|XP_001888632.1| predicted protein [Laccaria bicolor S238N-H82] gi|164636327|gb|EDR00623.1| predicted protein [Laccaria bicolor S238N-H82] Length = 129 Score = 65.3 bits (158), Expect = 4e-09, Method: Composition-based stats. Identities = 17/73 (23%), Positives = 36/73 (49%), Gaps = 6/73 (8%) Query: 109 IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVY 168 ++ + G GLN+ N ++ WW+ +E ++R ++G R V Y Sbjct: 22 CRVILVSIGAGGSGLNIT-ACNHVILMEPWWN-----PYVEASSISRAYRSGQNRNVHTY 75 Query: 169 YLIAQNTIDELVL 181 +L+ Q++I+E ++ Sbjct: 76 HLVVQDSIEENIV 88 >gi|196002339|ref|XP_002111037.1| hypothetical protein TRIADDRAFT_54568 [Trichoplax adhaerens] gi|190586988|gb|EDV27041.1| hypothetical protein TRIADDRAFT_54568 [Trichoplax adhaerens] Length = 1562 Score = 65.3 bits (158), Expect = 4e-09, Method: Composition-based stats. Identities = 23/146 (15%), Positives = 50/146 (34%), Gaps = 27/146 (18%) Query: 65 KANAAPIIVAYHFNSDLARLQKAF---------PQGRTL-DKDPCTIQEWN-EGKIPL-L 112 K +++ L L + G D + +N +G Sbjct: 729 KETGHRVLIFSQMVRMLDILAEYLQIKHFLFQRLDGSIRGDLRKQALDHFNADGSQDFCF 788 Query: 113 FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIA 172 + G GLNL + ++ F W+ + Q +R + G ++ Sbjct: 789 LLSTRAGGLGLNL-ASADTVIIFDSDWNPQNDIQA-----QSRAHRIGQRK--------- 833 Query: 173 QNTIDELVLQRLRTKSTIQDLLLNAL 198 QN+++E +++R K + L++ + Sbjct: 834 QNSVEEEIIERATKKMVLDHLVIQRM 859 >gi|91076936|ref|XP_975165.1| PREDICTED: similar to DNA repair protein RAD16 [Tribolium castaneum] Length = 1188 Score = 65.3 bits (158), Expect = 4e-09, Method: Composition-based stats. Identities = 30/169 (17%), Positives = 60/169 (35%), Gaps = 26/169 (15%) Query: 35 LANGAVYYDEEKHWKEVHDEKI-----KALEVIIE-------KANAAPIIVAYHFNSDLA 82 L + Y +H EKI +E I+ + I++ + L+ Sbjct: 985 LTSEISYIKPGEHQTVPESEKIAGNYSTKVESIVRLILKLRLEDEDVKILLFSTWIPVLS 1044 Query: 83 RLQKAFPQGR------TLDKDPCTIQEWNEGK--IPLLFAHPASCGHGLNLQYGGNILVF 134 +++A + T I+++ + I +L G GLNL + ++ Sbjct: 1045 YIREALTKNSVTSELITSGNLEKQIEKFKDADQNITVLLLPINLGGKGLNLIEATH-VIL 1103 Query: 135 FSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQR 183 + E Q I R+ + G R V+ ++TI+E + + Sbjct: 1104 TEPLLNPGEELQAIGRV-----HRIGQTRPTVVHKFFIKHTIEESIQKA 1147 >gi|116194784|ref|XP_001223204.1| hypothetical protein CHGG_03990 [Chaetomium globosum CBS 148.51] gi|88179903|gb|EAQ87371.1| hypothetical protein CHGG_03990 [Chaetomium globosum CBS 148.51] Length = 1140 Score = 65.3 bits (158), Expect = 4e-09, Method: Composition-based stats. Identities = 25/113 (22%), Positives = 47/113 (41%), Gaps = 8/113 (7%) Query: 93 TLDKDPCTIQEWNE-GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERI 151 T D+ I + E I +L A G LNL + N ++ WW+ Q R+ Sbjct: 1004 TKDQKEAAILNFQEKPNIKVLIASARCGGQALNLNF-ANRVISVDQWWNRAMEDQAFGRV 1062 Query: 152 GVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKST-IQDLLLNALKKETI 203 + G ++ + +I +++IDE++L K I D+ + + + Sbjct: 1063 -----HRIGQQKETYFTKIIVRDSIDEMLLNTQDAKEKRISDVFKEGVDRREM 1110 >gi|114762663|ref|ZP_01442097.1| possible ATP-dependent RNA helicase [Pelagibaca bermudensis HTCC2601] gi|114544573|gb|EAU47579.1| possible ATP-dependent RNA helicase [Roseovarius sp. HTCC2601] Length = 978 Score = 65.3 bits (158), Expect = 4e-09, Method: Composition-based stats. Identities = 36/207 (17%), Positives = 83/207 (40%), Gaps = 27/207 (13%) Query: 1 MKQYHKFQRELYCDLQGENIEAFNSA------SKTVKCLQ-LANGAVYYDEEKHWKEVHD 53 M +Y + + + DL + + +A +T+K L+ +A ++ + W+++ Sbjct: 417 MDEYGQDEIDEMEDLISTSATSAETAEQLEIEVETLKGLEGMALRVLHSGHDTKWQQLDK 476 Query: 54 EKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFP-------------QGRTLDKDPCT 100 ++ + +I+ L L+ G T ++ Sbjct: 477 ILDDD-LMLDPDGHRRKLIIFTEPKDTLEYLRNKVTARLGKPDAVDVIYGGVTREERRKV 535 Query: 101 IQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 ++ + + + L+ + G G+NLQ G +++V + L W+ + +Q RI + G Sbjct: 536 VERFMQDRDMLVLIANDAAGEGVNLQRG-HLMVNYDLPWNPNKIEQRFGRI-----HRIG 589 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTK 187 ++ L+A++T + V RL K Sbjct: 590 QTEVCHLWNLVAKDTREGDVYARLLEK 616 >gi|315922824|ref|ZP_07919064.1| helicase [Bacteroides sp. D2] gi|313696699|gb|EFS33534.1| helicase [Bacteroides sp. D2] Length = 1022 Score = 65.3 bits (158), Expect = 5e-09, Method: Composition-based stats. Identities = 39/214 (18%), Positives = 81/214 (37%), Gaps = 27/214 (12%) Query: 8 QRELYCDLQGENI-EAFNSASKTVKCLQLAN---GAVYYDEE-----KHWKEVHDEKIKA 58 + Y D GE + + + Q+A+ G + + + ++ D K++ Sbjct: 415 EDNSYTDYDGEEVLTQGGALGLVQRKRQVASSVWGYLNKETDLDRGIDAFESCPDAKVEE 474 Query: 59 LEVIIEK---ANAAPIIVAYHFNSDLARLQKAFPQGR--------TLDKDPCTIQEWNEG 107 L+ IIE + ++V F L L + ++ + ++ + Sbjct: 475 LQRIIEAVFKSGTKKLVVFALFRRTLKYLHIRLKKAGYNALIIHGQVENRAEILTQFKKD 534 Query: 108 KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFK-RAVF 166 K + GL++Q+ N +V + L W+ +Q I RI + G K + V Sbjct: 535 KNTHILLSSEVGSEGLDMQF-CNSMVNYDLPWNPMVVEQRIGRID-----RFGQKAKVVN 588 Query: 167 VYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKK 200 +Y L+ +I E + RL + I + ++ Sbjct: 589 IYNLVVAGSIQEEIYMRLLERIGIFRGTIGDMEA 622 >gi|302759176|ref|XP_002963011.1| hypothetical protein SELMODRAFT_438275 [Selaginella moellendorffii] gi|300169872|gb|EFJ36474.1| hypothetical protein SELMODRAFT_438275 [Selaginella moellendorffii] Length = 2074 Score = 65.3 bits (158), Expect = 5e-09, Method: Composition-based stats. Identities = 22/128 (17%), Positives = 50/128 (39%), Gaps = 13/128 (10%) Query: 70 PIIVAYHFNSDLARLQKAFP-------QGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHG 122 I+V + L L+ A + + + +I E+ + I ++ +G Sbjct: 1111 KILVFSTWQEVLDLLEHALKSNKLSWVRLKQRRQMGSSILEFKKENIQVMLLPIQHGANG 1170 Query: 123 LNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQ 182 LNL + ++ + Q I R+ + G + V+ I +NT++E + + Sbjct: 1171 LNLIEAQH-VILVEPLLNPAVEAQAINRV-----HRIGQRLKTLVHRFIIRNTVEENIYK 1224 Query: 183 RLRTKSTI 190 + K+ + Sbjct: 1225 MSQQKTNL 1232 >gi|260174557|ref|ZP_05760969.1| helicase domain protein [Bacteroides sp. D2] Length = 1046 Score = 65.3 bits (158), Expect = 5e-09, Method: Composition-based stats. Identities = 39/214 (18%), Positives = 81/214 (37%), Gaps = 27/214 (12%) Query: 8 QRELYCDLQGENI-EAFNSASKTVKCLQLAN---GAVYYDEE-----KHWKEVHDEKIKA 58 + Y D GE + + + Q+A+ G + + + ++ D K++ Sbjct: 439 EDNSYTDYDGEEVLTQGGALGLVQRKRQVASSVWGYLNKETDLDRGIDAFESCPDAKVEE 498 Query: 59 LEVIIEK---ANAAPIIVAYHFNSDLARLQKAFPQGR--------TLDKDPCTIQEWNEG 107 L+ IIE + ++V F L L + ++ + ++ + Sbjct: 499 LQRIIEAVFKSGTKKLVVFALFRRTLKYLHIRLKKAGYNALIIHGQVENRAEILTQFKKD 558 Query: 108 KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFK-RAVF 166 K + GL++Q+ N +V + L W+ +Q I RI + G K + V Sbjct: 559 KNTHILLSSEVGSEGLDMQF-CNSMVNYDLPWNPMVVEQRIGRID-----RFGQKAKVVN 612 Query: 167 VYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKK 200 +Y L+ +I E + RL + I + ++ Sbjct: 613 IYNLVVAGSIQEEIYMRLLERIGIFRGTIGDMEA 646 >gi|86136229|ref|ZP_01054808.1| hypothetical protein MED193_18939 [Roseobacter sp. MED193] gi|85827103|gb|EAQ47299.1| hypothetical protein MED193_18939 [Roseobacter sp. MED193] Length = 1032 Score = 65.3 bits (158), Expect = 5e-09, Method: Composition-based stats. Identities = 19/135 (14%), Positives = 42/135 (31%), Gaps = 25/135 (18%) Query: 53 DEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAFPQ------------GRTLDKDP 98 ++ A I+ + +V R + + + + Sbjct: 815 SARLLATMDILRGVQDRGERALVFIEHVKMQHRFIELTKREFGLPRVDLINGSTPIPRRQ 874 Query: 99 CTIQEWN-----EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGV 153 + + + LL P + G GL L + ++ S WW+ +Q +R+ Sbjct: 875 EIVNRFQRHLARDEGFDLLVLGPKAAGTGLTLTAATH-VIHLSRWWNPAVEEQCNDRV-- 931 Query: 154 TRQRQAGFKRAVFVY 168 + G + V V+ Sbjct: 932 ---HRIGQSKPVTVH 943 >gi|66807307|ref|XP_637376.1| SNF2-related domain-containing protein [Dictyostelium discoideum AX4] gi|60465784|gb|EAL63860.1| SNF2-related domain-containing protein [Dictyostelium discoideum AX4] Length = 1872 Score = 65.3 bits (158), Expect = 5e-09, Method: Composition-based stats. Identities = 23/129 (17%), Positives = 50/129 (38%), Gaps = 15/129 (11%) Query: 69 APIIVAYHFNSDLARLQKAFPQ-----GRTLDKDPC---TIQEWN-EGKIPLLFAHPASC 119 II+ + L + +A + + + + I ++ + + +L Sbjct: 1701 QKIIIFSQWADVLEIISRALKENEIQFAKAVHRGSSFEMAINQFRKDPNVNVLLLPLIKG 1760 Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 G+GLNL + + + +Q I R+ + G + ++ I +NTI+E Sbjct: 1761 GNGLNLIEATH-VFLVEPILNPALEKQAINRV-----HRFGQNKETNIHRFIIKNTIEEK 1814 Query: 180 VLQRLRTKS 188 V+Q + K Sbjct: 1815 VVQMNQLKE 1823 >gi|322499968|emb|CBZ35042.1| unnamed protein product [Leishmania donovani BPK282A1] Length = 1873 Score = 65.3 bits (158), Expect = 5e-09, Method: Composition-based stats. Identities = 29/147 (19%), Positives = 54/147 (36%), Gaps = 23/147 (15%) Query: 54 EKIKALEVIIEKANAAPIIVAYHF------NSDLARLQKAFP----QGRTLDKDPCTIQE 103 ++ +E I ++V + D Q P +L + ++ Sbjct: 1675 AFLEVVEEIWRTQPDDGVLVFSKYPAFLKLAHDAVAAQGYAPHMVCGASSLAQRQRAMRA 1734 Query: 104 WNEG-------KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 + +LF S GLNL + N +VF + QQ + R+ Sbjct: 1735 MQPPSGASVLSQRRILFVTSRSANAGLNLTF-ANHVVFLEPNLNPAIEQQAVGRV----- 1788 Query: 157 RQAGFKRAVFVYYLIAQNTIDELVLQR 183 + G R V V++ A +TI+E++ +R Sbjct: 1789 HRFGQLRQVIVHHFFAPHTIEEVIYRR 1815 >gi|242047042|ref|XP_002461267.1| hypothetical protein SORBIDRAFT_02g043870 [Sorghum bicolor] gi|241924644|gb|EER97788.1| hypothetical protein SORBIDRAFT_02g043870 [Sorghum bicolor] Length = 1205 Score = 65.3 bits (158), Expect = 5e-09, Method: Composition-based stats. Identities = 30/107 (28%), Positives = 49/107 (45%), Gaps = 9/107 (8%) Query: 92 RTLDKDPCTIQEWN---EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMI 148 + L + ++N EGK +L A +C G++L G + LV W+ + +Q I Sbjct: 1065 QELPVRSDVMDKFNSDREGKRKVLIASTTACAEGISLT-GASRLVMLDSEWNHSKTRQAI 1123 Query: 149 ERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 R + G +R VFVY L+A T +E R K+ I ++ Sbjct: 1124 AR-----AFRPGQERMVFVYLLVASGTWEEDKYNSNRRKAWIAKMVF 1165 >gi|146089885|ref|XP_001470501.1| hypothetical protein [Leishmania infantum JPCM5] gi|134070534|emb|CAM68877.1| conserved hypothetical protein [Leishmania infantum JPCM5] Length = 1871 Score = 65.3 bits (158), Expect = 5e-09, Method: Composition-based stats. Identities = 29/147 (19%), Positives = 54/147 (36%), Gaps = 23/147 (15%) Query: 54 EKIKALEVIIEKANAAPIIVAYHF------NSDLARLQKAFP----QGRTLDKDPCTIQE 103 ++ +E I ++V + D Q P +L + ++ Sbjct: 1673 AFLEVVEEIWRTQPDDGVLVFSKYPAFLKLAHDAVAAQGYAPHMVCGASSLAQRQRAMRA 1732 Query: 104 WNEG-------KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 + +LF S GLNL + N +VF + QQ + R+ Sbjct: 1733 MQPPSGASVLSQRRILFVTSRSANAGLNLTF-ANHVVFLEPNLNPAIEQQAVGRV----- 1786 Query: 157 RQAGFKRAVFVYYLIAQNTIDELVLQR 183 + G R V V++ A +TI+E++ +R Sbjct: 1787 HRFGQLRQVIVHHFFAPHTIEEVIYRR 1813 >gi|310765239|gb|ADP10189.1| Non-specific serine/threonine protein kinase [Erwinia sp. Ejp617] Length = 1081 Score = 65.3 bits (158), Expect = 5e-09, Method: Composition-based stats. Identities = 32/205 (15%), Positives = 72/205 (35%), Gaps = 31/205 (15%) Query: 16 QGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIK-ALEVI--IEKANAAPII 72 +G K + + E ++E H K+ L + I+++ +I Sbjct: 866 EGMQQAGTGMLGLLHKLKLICAHPFSVNPEPGYRE-HSPKLNWMLHTLDGIKRSGEDKVI 924 Query: 73 VAYHFNSDLARLQKAF----------------PQGRTLDKDPCTIQEWNE-GKIPLLFAH 115 V LQ A + + + I ++ ++ Sbjct: 925 VFTELRDLQRELQHAIYQRFGFRPVIINGDTSTKSNSQNSRQKLIDDFQSQPGFDVIILS 984 Query: 116 PASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQN- 174 + G G+N+Q N ++ F+ W+ + Q +R + G + V+VYY ++ Sbjct: 985 TVAVGFGVNVQK-ANHVIHFTRCWNPAKEDQATDR-----AYRIGQTKDVYVYYPTVRDS 1038 Query: 175 ---TIDELVLQRLRTKSTIQDLLLN 196 T +E + + L + ++ +L+ Sbjct: 1039 EVTTFEETLDELLNRRRSLARDMLS 1063 >gi|332019805|gb|EGI60266.1| SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1 [Acromyrmex echinatior] Length = 693 Score = 65.3 bits (158), Expect = 5e-09, Method: Composition-based stats. Identities = 28/120 (23%), Positives = 50/120 (41%), Gaps = 10/120 (8%) Query: 84 LQKAFPQGRTLDKDPCT-IQEWNE-GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDL 141 + G+T + I ++ E + + G+ L N++VF L+W+ Sbjct: 513 IVYIRIDGKTSSEQRQLLIDKFQECDECLAAVLSITAVNTGVTLT-AANLVVFTELFWNP 571 Query: 142 EEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 Q +R+ + G V + YLIAQNT D+ + L K I + + LK++ Sbjct: 572 GILSQAEDRV-----HRIGQNNIVTIQYLIAQNTADDYIWPLLNKKKDILNAV--GLKQD 624 >gi|260712905|ref|YP_003226960.1| SNF2-related protein [Zymomonas mobilis subsp. mobilis NCIB 11163] gi|258553431|gb|ACV76376.1| SNF2-related protein [Zymomonas mobilis subsp. mobilis NCIMB 11163] Length = 1034 Score = 65.3 bits (158), Expect = 5e-09, Method: Composition-based stats. Identities = 32/188 (17%), Positives = 63/188 (33%), Gaps = 33/188 (17%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANG-AVYYDEEKHWKEVHDEKIKALE 60 K Y +++L +G N+ + AV ++ A Sbjct: 769 KAYDDIRKKLKEGQRG------NALKLLHHIRTASVHPAVSSVSTDQKFIAQSGRLAATF 822 Query: 61 VIIEK--ANAAPIIVA-------YHF----NSDLARLQKAFPQGRT-LDKDPCTIQEWNE 106 I+++ +V Y F S+ + G+T + + + + + Sbjct: 823 EILKRIKTRGERALVFIENLKMQYRFAALVRSEFGLERVEIINGQTSISERQKIVDRFQK 882 Query: 107 ------GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 K LL P + G GL L + ++ S WW+ +Q +R+ + G Sbjct: 883 HLKDSKNKFDLLILGPRAAGTGLTLTAATH-VIHLSRWWNPAVEEQCNDRV-----HRLG 936 Query: 161 FKRAVFVY 168 + V+VY Sbjct: 937 QTQPVYVY 944 >gi|313906357|ref|ZP_07839698.1| helicase domain protein [Eubacterium cellulosolvens 6] gi|313468821|gb|EFR64182.1| helicase domain protein [Eubacterium cellulosolvens 6] Length = 1190 Score = 65.3 bits (158), Expect = 5e-09, Method: Composition-based stats. Identities = 30/161 (18%), Positives = 62/161 (38%), Gaps = 24/161 (14%) Query: 53 DEKIKALEVIIEKANAA---PIIVAYHFNSDLARLQKAF---------------PQGRTL 94 D K++ L +I + +I+ F L ++K + R Sbjct: 678 DPKLEKLFDVIARKQGEENNRVILFSSFQHTLRYVKKHLQAKGYRVAQVDGFVPDEERFE 737 Query: 95 DKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 ++ + NE + +L GL+ Q+ + ++ + L W+ +Q I RI Sbjct: 738 IRERFLMDRDNEQAVDVLLFS-EVGCEGLDYQF-CDTMINYDLPWNPMRIEQRIGRID-- 793 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 R+ +V +Y +I TID ++ R +K + + + Sbjct: 794 --RRGQKSESVRIYNMITDGTIDAVIHDRCLSKIGVFESSI 832 >gi|158421592|ref|YP_001527819.1| helicase related protein [Deinococcus geothermalis DSM 11300] gi|158342835|gb|ABW35121.1| helicase related protein [Deinococcus geothermalis DSM 11300] Length = 1786 Score = 65.3 bits (158), Expect = 5e-09, Method: Composition-based stats. Identities = 32/176 (18%), Positives = 63/176 (35%), Gaps = 20/176 (11%) Query: 33 LQLANGAVYYDEEKHWKEVHD----EKIKALEVIIEKANAAPIIVAYHFNSDLARLQK-- 86 LQ A G + + HD K++ + + ++ +A L++ Sbjct: 1546 LQSALGTLKHAAIGRVVNEHDPATNAKVQHVLNLAHARRGRGGVIFARNRRSIAMLKEQL 1605 Query: 87 --------AFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLW 138 T D + ++ G + ++ + G NLQ+ G LV + L Sbjct: 1606 EAQGHRVGVIDGSTTTDGKGKVRKAFDAGHVDIVLCS-DAGATGANLQHRGEWLVNYDLP 1664 Query: 139 WDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 + +Q RI + G + V +++L+ D +QRL K + +L Sbjct: 1665 LTQKTLEQRNARID-----RLGQTKKVELHHLVTDTAYDRDNVQRLTRKRELGSIL 1715 >gi|110669157|ref|YP_658968.1| ATP-dependent helicase HepA [Haloquadratum walsbyi DSM 16790] gi|109626904|emb|CAJ53373.1| ATP-dependent helicase HepA [Haloquadratum walsbyi DSM 16790] Length = 959 Score = 65.3 bits (158), Expect = 5e-09, Method: Composition-based stats. Identities = 27/157 (17%), Positives = 60/157 (38%), Gaps = 18/157 (11%) Query: 47 HWKEVHDEKIKAL--EVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD------- 97 + D K++ L E + ++ + +I+ + L L+ + + D Sbjct: 480 RVTKSRDAKLQRLLDETLPQRFQYSRVIIFTKYVDTLEYLKDQIEESQGERTDVFTLHGS 539 Query: 98 ---PCTIQEWNE--GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIG 152 + +NE G + G+NLQ+ N ++ + L W+ +Q RI Sbjct: 540 LNEAQRKERFNEFEGSDRAVLIATDVISEGMNLQHAANQIIHYELPWNPNRLEQRNGRID 599 Query: 153 VTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKST 189 Q + V + ++ ++ +D +L+ L K+ Sbjct: 600 RYGQ----EEDEVVIRTMVVEDQMDVAILKTLVKKAD 632 >gi|116191639|ref|XP_001221632.1| hypothetical protein CHGG_05537 [Chaetomium globosum CBS 148.51] gi|88181450|gb|EAQ88918.1| hypothetical protein CHGG_05537 [Chaetomium globosum CBS 148.51] Length = 1040 Score = 65.3 bits (158), Expect = 5e-09, Method: Composition-based stats. Identities = 28/132 (21%), Positives = 49/132 (37%), Gaps = 16/132 (12%) Query: 73 VAYHFNSDLARLQKAFPQGRTLDKDPCT-IQEWN-EGKIPLLFAHPASCGHGLNLQYGGN 130 V F L ++ G+T K T + ++N + ++ + G G+NL G N Sbjct: 771 VIEAFIQRLDNIKYIRMDGKTPVKQRQTLVDQFNTDPELDVFLLTTKVGGLGVNLT-GAN 829 Query: 131 ILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYL--------IAQNTIDELVLQ 182 ++ F W+ Q ER + G KR + L ++ D +LQ Sbjct: 830 RVIIFDPDWNPSTDVQARERAW-----RLGQKREQTTFNLNDLHDLFSLSSYEHDRKMLQ 884 Query: 183 RLRTKSTIQDLL 194 + + Q L Sbjct: 885 QEANRIAAQAAL 896 >gi|295829278|gb|ADG38308.1| AT2G46020-like protein [Capsella grandiflora] gi|295829280|gb|ADG38309.1| AT2G46020-like protein [Capsella grandiflora] gi|295829282|gb|ADG38310.1| AT2G46020-like protein [Capsella grandiflora] gi|295829284|gb|ADG38311.1| AT2G46020-like protein [Capsella grandiflora] gi|295829286|gb|ADG38312.1| AT2G46020-like protein [Capsella grandiflora] gi|295829288|gb|ADG38313.1| AT2G46020-like protein [Capsella grandiflora] Length = 201 Score = 65.3 bits (158), Expect = 5e-09, Method: Composition-based stats. Identities = 22/94 (23%), Positives = 37/94 (39%), Gaps = 9/94 (9%) Query: 82 ARLQKAFPQGRT-LDKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLW 138 RL G T L+ I ++N+ + + G GLNLQ + +V + Sbjct: 15 RRLVYRRIDGTTSLEDRESAIVDFNDPDTDCFIFLLSIRAAGRGLNLQT-ADTVVIYDPD 73 Query: 139 WDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIA 172 + + +Q + R + G R V V Y+ A Sbjct: 74 PNPKNEEQAVAR-----AHRIGQTREVKVIYMEA 102 >gi|238588204|ref|XP_002391661.1| hypothetical protein MPER_08877 [Moniliophthora perniciosa FA553] gi|215456617|gb|EEB92591.1| hypothetical protein MPER_08877 [Moniliophthora perniciosa FA553] Length = 249 Score = 65.3 bits (158), Expect = 5e-09, Method: Composition-based stats. Identities = 27/150 (18%), Positives = 52/150 (34%), Gaps = 38/150 (25%) Query: 51 VHDEKIKALEVIIE--KANAAPIIVAYHFNSDLAR---------LQKAFPQGRT-LDKDP 98 + K++AL +++ + ++V F L ++ G T +D Sbjct: 32 LDSGKVQALLKLLKIYEDEGRKVLVFSQFTQVLDILELILKERNIKYLMLTGSTPVDVRQ 91 Query: 99 CTIQEWNEGK-IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 + E+ E + I + G G+NL ++++ Sbjct: 92 SLVDEFTEDQSISAFLLSTKAGGMGINLT-AASVVIM----------------------- 127 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTK 187 G KR V V LI + TI+E + + K Sbjct: 128 -IGQKRDVDVVKLITRXTIEEDITELGEMK 156 >gi|218191902|gb|EEC74329.1| hypothetical protein OsI_09617 [Oryza sativa Indica Group] Length = 661 Score = 65.3 bits (158), Expect = 5e-09, Method: Composition-based stats. Identities = 26/176 (14%), Positives = 62/176 (35%), Gaps = 45/176 (25%) Query: 44 EEKHWKEVHDEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQ---------------- 85 E +H + K+ L++I++K + +++ L LQ Sbjct: 363 EGEHLVQ-ASGKLVMLDLILKKLHEVGHRVLLFAQMTQTLDILQDFLELRQYTYERLDGS 421 Query: 86 ----KAFPQGRTLDKDPC--TIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWW 139 + F ++ P +++ N+ + + G GLNL G + ++F+ W Sbjct: 422 VRAEERFAAIKSFSSQPTKGVVRDDNQSGAFVFMISTRAGGVGLNL-IGADTVIFYEQDW 480 Query: 140 DLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 + + +Q ++R + G V +++R K + ++ Sbjct: 481 NPQADKQALQR-----AHRIGQLNNV--------------IMRRAERKLKLSHSVI 517 >gi|237743866|ref|ZP_04574347.1| conserved hypothetical protein [Fusobacterium sp. 7_1] gi|229432897|gb|EEO43109.1| conserved hypothetical protein [Fusobacterium sp. 7_1] Length = 1163 Score = 65.3 bits (158), Expect = 5e-09, Method: Composition-based stats. Identities = 23/125 (18%), Positives = 54/125 (43%), Gaps = 21/125 (16%) Query: 72 IVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGK-IPLLFAHPASCGHGLNLQYGGN 130 ++ Y F+ ++ + + + ++ + + ++ P + G GLN+ N Sbjct: 841 VIKYWFDIEVGIVNGDADKTS----RRRILDDFRKKEGFNVIILSPEAAGVGLNIVE-AN 895 Query: 131 ILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQN----------TIDELV 180 ++ ++ W+ + +Q +R + G K+ V+VYY I N T+DE + Sbjct: 896 HVIHYTRHWNPAKEEQATDR-----AYRIGQKKDVYVYYPIISNVENIEREEYHTVDEWI 950 Query: 181 LQRLR 185 ++L Sbjct: 951 RKQLE 955 >gi|224100259|ref|XP_002311805.1| chromatin remodeling complex subunit [Populus trichocarpa] gi|222851625|gb|EEE89172.1| chromatin remodeling complex subunit [Populus trichocarpa] Length = 3427 Score = 65.3 bits (158), Expect = 5e-09, Method: Composition-based stats. Identities = 18/86 (20%), Positives = 32/86 (37%), Gaps = 14/86 (16%) Query: 112 LFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLI 171 + + G G+NLQ + ++ F W+ + Q R + G KR V Sbjct: 1468 VVVSIRAGGVGVNLQ-AADTVIIFDTDWNPQVDLQAQAR-----AHRIGQKREVQ----- 1516 Query: 172 AQNTIDELVLQRLRTKSTIQDLLLNA 197 T++E V K + + + A Sbjct: 1517 ---TVEEQVRASAEHKLGVANQSITA 1539 >gi|12043930|gb|AAG47648.1| HepA-related protein HARP [Mus musculus] Length = 900 Score = 65.0 bits (157), Expect = 5e-09, Method: Composition-based stats. Identities = 21/145 (14%), Positives = 53/145 (36%), Gaps = 9/145 (6%) Query: 45 EKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAF--PQGRTLDKDPCTIQ 102 + + ++ + +++ +V H L + K + + D + Sbjct: 661 NRTAEAKIPCVVEYILDLLDS-GREKFLVFAHHKVILDAVAKELERKNVQHIRIDGSCQR 719 Query: 103 EWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFK 162 + + GL +++VF L+W+ Q +R+ + G Sbjct: 720 FQLSKGHTVALLSITAANMGLTFST-ADLVVFAELFWNPGVLIQAEDRV-----HRIGQT 773 Query: 163 RAVFVYYLIAQNTIDELVLQRLRTK 187 +V ++YL+A+ T D+ + ++ K Sbjct: 774 NSVSIHYLVAKGTADDYLWPLIQEK 798 >gi|326384403|ref|ZP_08206083.1| helicase domain-containing protein [Gordonia neofelifaecis NRRL B-59395] gi|326196748|gb|EGD53942.1| helicase domain-containing protein [Gordonia neofelifaecis NRRL B-59395] Length = 1164 Score = 65.0 bits (157), Expect = 5e-09, Method: Composition-based stats. Identities = 38/167 (22%), Positives = 59/167 (35%), Gaps = 29/167 (17%) Query: 45 EKHWKEV----HDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQK------------AF 88 ++ W E+ D K+ L + +IV L L Sbjct: 481 DRKWSELRGLLTDRKL--LRD--KSGRPRKLIVFTEHKDTLDYLTAQIRNVLGSDDAVLT 536 Query: 89 PQGRTLDKDPCTIQEW--NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 G T D I+E NE L+ + G GLNLQ +++V + L W+ +Q Sbjct: 537 IHGGTRRADRVAIREQFTNEPD-RLVLVATDAAGEGLNLQ-AAHLMVNYDLPWNPNRLEQ 594 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDL 193 RI + G K ++ ++A T + V RL K Q Sbjct: 595 RFGRI-----HRIGQKNVCRLWNIVAAETREGQVYTRLLAKMEQQRA 636 >gi|291460281|ref|ZP_06599671.1| putative helicase [Oribacterium sp. oral taxon 078 str. F0262] gi|291417036|gb|EFE90755.1| putative helicase [Oribacterium sp. oral taxon 078 str. F0262] Length = 1194 Score = 65.0 bits (157), Expect = 5e-09, Method: Composition-based stats. Identities = 30/162 (18%), Positives = 62/162 (38%), Gaps = 24/162 (14%) Query: 52 HDEKIKALEVIIEK---ANAAPIIVAYHFNSDLARLQKAF---------------PQGRT 93 D K + +I++ + +I+ F L+ L++ + R Sbjct: 683 DDPKFDRMLEVIQEKQTTDNNRVIIFSSFRHTLSYLREKLTAQGIRVGQVDGSVPDEERY 742 Query: 94 LDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGV 153 + + N + +LF GL+ Q+ + ++ + L W+ +Q I RI Sbjct: 743 KLRQRFLLDRDNVNAVDVLFFS-EVGCEGLDYQF-CDTMINYDLPWNPMRIEQRIGRID- 799 Query: 154 TRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 R+ V +Y +I Q TID ++ R +K + + + Sbjct: 800 ---RRGQKSDTVKIYNMITQGTIDAVIYDRCLSKIGVFEASI 838 >gi|315652132|ref|ZP_07905130.1| conserved hypothetical protein [Eubacterium saburreum DSM 3986] gi|315485624|gb|EFU76008.1| conserved hypothetical protein [Eubacterium saburreum DSM 3986] Length = 1191 Score = 65.0 bits (157), Expect = 5e-09, Method: Composition-based stats. Identities = 33/163 (20%), Positives = 63/163 (38%), Gaps = 24/163 (14%) Query: 51 VHDEKIKALEVIIEK---ANAAPIIVAYHFNSDLARLQKAFPQ----GRTLDKDPCTIQE 103 + D K L I+ + + IIV F L L+K + +D + Sbjct: 679 IDDPKFMRLLEIVNQKQKEDNNRIIVFSSFRHTLGYLKKNLKKHGIRVGQVDGSVPDEER 738 Query: 104 WN-----------EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIG 152 +N + I +L GL+ Q+ + ++ + L W+ +Q I RI Sbjct: 739 FNLRKRFLLDRNEKDAIDVLLFS-EVGCEGLDYQF-CDSMINYDLPWNPMRIEQRIGRID 796 Query: 153 VTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 R+ V +Y +I ++TID ++ R +K + + + Sbjct: 797 ----RRGQKSDTVKIYNMITEDTIDAVIYDRCLSKIGVFEESI 835 >gi|302757351|ref|XP_002962099.1| hypothetical protein SELMODRAFT_76516 [Selaginella moellendorffii] gi|300170758|gb|EFJ37359.1| hypothetical protein SELMODRAFT_76516 [Selaginella moellendorffii] Length = 616 Score = 65.0 bits (157), Expect = 5e-09, Method: Composition-based stats. Identities = 25/139 (17%), Positives = 54/139 (38%), Gaps = 19/139 (13%) Query: 55 KIKALEVIIEKANAA--PIIVAYHFNSDLARLQKAFPQGRT----LDKDPCTI------- 101 K+ A++ + +V H ++ + + + + +D D + Sbjct: 472 KVPAVQDYLSTMLETNCKFLVFAHHHTMVNGIDEHLKKKNVEFIRIDGDTSPVIRQSMVD 531 Query: 102 QEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGF 161 + N K+ + G GL L + ++F + W + Q +R + G Sbjct: 532 KFQNNEKVRAAVLSIRAAGLGLTLT-SASTVIFAEMSWTPGDLIQAEDR-----AHRIGQ 585 Query: 162 KRAVFVYYLIAQNTIDELV 180 + +V +YYL A +TID+ + Sbjct: 586 RSSVNIYYLHAPDTIDDFI 604 >gi|302658392|ref|XP_003020900.1| SNF2 family helicase, putative [Trichophyton verrucosum HKI 0517] gi|291184770|gb|EFE40282.1| SNF2 family helicase, putative [Trichophyton verrucosum HKI 0517] Length = 1167 Score = 65.0 bits (157), Expect = 5e-09, Method: Composition-based stats. Identities = 29/177 (16%), Positives = 64/177 (36%), Gaps = 34/177 (19%) Query: 47 HWKEVHDEKIK-ALEVIIEKANAAPIIVAY-------HFNSDLA------RLQKAFPQGR 92 K+ LE +++ + II+ Y L R+ + Sbjct: 865 KVIGTVSAKLSYLLEKVLQFQDTEKIIIFYESENTAFWIAEGLELVGTDFRIYAHTLKAS 924 Query: 93 TLDKDPCTIQEWNEGK-IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERI 151 + +NEG+ + +L HGL++ + + + WD Q I+R Sbjct: 925 QK---SEYLSTFNEGESVRVLLMDLRQASHGLHIAIASRVFI-VNPIWDPNIESQAIKR- 979 Query: 152 GVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLR----------TKSTIQDLLLNAL 198 + R V+V L+ ++T+++ +L+R + K + D ++++ Sbjct: 980 ----AHRISQTRPVYVETLVLKDTLEDKMLRRRKAMTSVEMQHAEKDMLNDGTMSSI 1032 >gi|302498861|ref|XP_003011427.1| SNF2 family helicase, putative [Arthroderma benhamiae CBS 112371] gi|291174978|gb|EFE30787.1| SNF2 family helicase, putative [Arthroderma benhamiae CBS 112371] Length = 1167 Score = 65.0 bits (157), Expect = 5e-09, Method: Composition-based stats. Identities = 29/177 (16%), Positives = 64/177 (36%), Gaps = 34/177 (19%) Query: 47 HWKEVHDEKIK-ALEVIIEKANAAPIIVAY-------HFNSDLA------RLQKAFPQGR 92 K+ LE +++ + II+ Y L R+ + Sbjct: 865 KVIGTVSAKLSYLLEKVLQFQDTEKIIIFYESENTAFWIAEGLELVGTDFRIYAHTLKAS 924 Query: 93 TLDKDPCTIQEWNEGK-IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERI 151 + +NEG+ + +L HGL++ + + + WD Q I+R Sbjct: 925 QK---SEYLSTFNEGESVRVLLMDLRQASHGLHIAIASRVFI-VNPIWDPNIESQAIKR- 979 Query: 152 GVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLR----------TKSTIQDLLLNAL 198 + R V+V L+ ++T+++ +L+R + K + D ++++ Sbjct: 980 ----AHRISQTRPVYVETLVLKDTLEDKMLRRRKAMTSVEMQHAEKDMLNDGTMSSI 1032 >gi|304439383|ref|ZP_07399295.1| SNF2 domain protein [Peptoniphilus duerdenii ATCC BAA-1640] gi|304372165|gb|EFM25759.1| SNF2 domain protein [Peptoniphilus duerdenii ATCC BAA-1640] Length = 55 Score = 65.0 bits (157), Expect = 6e-09, Method: Composition-based stats. Identities = 18/44 (40%), Positives = 29/44 (65%) Query: 44 EEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKA 87 +K ++HD K+ ALE +IE AN P+++AY F DL R+++ Sbjct: 9 AKKESIQIHDRKLDALEDLIEGANGKPVLIAYWFKHDLTRIKEY 52 >gi|255320269|ref|ZP_05361454.1| Non-specific serine/threonine protein kinase [Acinetobacter radioresistens SK82] gi|255302708|gb|EET81940.1| Non-specific serine/threonine protein kinase [Acinetobacter radioresistens SK82] Length = 1067 Score = 65.0 bits (157), Expect = 6e-09, Method: Composition-based stats. Identities = 40/181 (22%), Positives = 72/181 (39%), Gaps = 35/181 (19%) Query: 37 NGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNS---DLARL--QKAFPQG 91 N ++Y + W IK LEVI K +I+ F L R+ ++ Sbjct: 888 NASIYESPKVDWL------IKTLEVI--KTKNEKVIIFTEFRDIQVFLKRILLERFGLNV 939 Query: 92 RTLDKDPCT-----------IQEWNE-GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWW 139 T++ D T I ++ ++ + G G+N+Q N ++ ++ W Sbjct: 940 TTVNGDSNTSSKKGLTRQNLIDKFQATSGFNVIILSTTAVGFGVNIQK-ANHVIHYTRSW 998 Query: 140 DLEEHQQMIERIGVTRQRQAGFKRAVFVYY-LIAQN---TIDELVLQRLRTKSTIQDLLL 195 + + Q +R + G + VFVYY IA N T + + + L +K + D +L Sbjct: 999 NPAKEDQATDR-----AYRIGQDKEVFVYYPSIAANDFDTFEIKLDRLLSSKRALADDML 1053 Query: 196 N 196 Sbjct: 1054 Q 1054 >gi|126323929|ref|XP_001378454.1| PREDICTED: similar to mDomino [Monodelphis domestica] Length = 3065 Score = 65.0 bits (157), Expect = 6e-09, Method: Composition-based stats. Identities = 28/171 (16%), Positives = 66/171 (38%), Gaps = 19/171 (11%) Query: 25 SASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLA 82 +A + Q+ N V E + K++AL ++++K + +++ L Sbjct: 1756 TAPYLQQLHQITNLKVLQFPELRLVQYDSGKLEALAILLQKLKSEGRRVLILSQMILMLD 1815 Query: 83 RLQK----------AFPQGRTLDKDPCTIQEWNEGK-IPLLFAHPASCGHGLNLQYGGNI 131 L+ + ++ ++ +N+ K I S G+NL + Sbjct: 1816 ILEMFLDFHYLTYVRVDENANSEQRQELMKSFNKDKRIFCAILSTHSRSTGINLVE-ADT 1874 Query: 132 LVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQ 182 +VF+ + + E + G + + +Y L++ N+I+E +L+ Sbjct: 1875 VVFYDNDLNPVMDAKAQEWCD-----RIGRSKDIHIYRLVSGNSIEEKLLK 1920 >gi|328725886|ref|XP_003248657.1| PREDICTED: e3 ubiquitin-protein ligase SHPRH-like [Acyrthosiphon pisum] Length = 185 Score = 65.0 bits (157), Expect = 6e-09, Method: Composition-based stats. Identities = 28/145 (19%), Positives = 56/145 (38%), Gaps = 18/145 (12%) Query: 48 WKEVHDEKIKA----LEVIIEKANAAPIIVAYHFNSDLARLQKAFPQ-------GRTLDK 96 K KI+ L +I + +++ +++ L L +A Q +T K Sbjct: 20 IKGSFSTKIECVTLKLMELISQDPNVKVLIFSNWDKALNLLGEALDQNSISYRILKTGTK 79 Query: 97 DPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTR 155 T++++ + I L + GLNL + F + + Q I I Sbjct: 80 YKKTLKDFKLKKNINALLVKLSVGSKGLNLTE-ATRIFFMDPIINKADEHQAIGTI---- 134 Query: 156 QRQAGFKRAVFVYYLIAQNTIDELV 180 + G + FV+ I +++I+E + Sbjct: 135 -HRLGQTKPTFVHNFIIRDSIEENI 158 >gi|331235570|ref|XP_003330445.1| DNA repair protein rad-5 [Puccinia graminis f. sp. tritici CRL 75-36-700-3] gi|309309435|gb|EFP86026.1| DNA repair protein rad-5 [Puccinia graminis f. sp. tritici CRL 75-36-700-3] Length = 1289 Score = 65.0 bits (157), Expect = 6e-09, Method: Composition-based stats. Identities = 25/114 (21%), Positives = 42/114 (36%), Gaps = 16/114 (14%) Query: 51 VHDEKIKALEV-IIEKANAAP---IIVAYHFNSDLARLQKAFPQGRTL----------DK 96 V K++AL +I+ P +V F L +++ + R K Sbjct: 1177 VSSTKLEALIDHLIKARQTDPGFSAVVFSQFTGFLDLIEQVLKRDRFRFVRLDGTLSTRK 1236 Query: 97 DPCTIQEWNEGKIP-LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIE 149 ++ +N+ + P +L G GLNL N + WW+ Q IE Sbjct: 1237 RKKALETFNDPRKPCILVCSLKVAGVGLNL-IKANRVYMMDTWWNEAIENQAIE 1289 >gi|211906288|gb|ACJ11662.1| putative phage-associated helicase [Candidatus Hamiltonella defensa] Length = 72 Score = 65.0 bits (157), Expect = 6e-09, Method: Composition-based stats. Identities = 21/59 (35%), Positives = 33/59 (55%), Gaps = 5/59 (8%) Query: 144 HQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKET 202 +QQ R+ + G R VF+++L+ ++ID VL+ L K Q LL+ALKK+ Sbjct: 1 YQQFNARL-----HRQGQTRPVFIHHLVMNDSIDITVLEALENKHINQKALLDALKKDI 54 >gi|237840979|ref|XP_002369787.1| DNA repair protein, putative [Toxoplasma gondii ME49] gi|211967451|gb|EEB02647.1| DNA repair protein, putative [Toxoplasma gondii ME49] gi|221483703|gb|EEE22015.1| DNA repair protein, putative [Toxoplasma gondii GT1] Length = 1733 Score = 65.0 bits (157), Expect = 6e-09, Method: Composition-based stats. Identities = 16/77 (20%), Positives = 30/77 (38%), Gaps = 6/77 (7%) Query: 111 LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYL 170 +L + GLNL + WW+ + Q ++RI + G + V V Sbjct: 1526 ILLCSLKAGNVGLNLTR-ASRCYLMDGWWNPQVENQAMKRIW-----RFGQDKPVKVVRF 1579 Query: 171 IAQNTIDELVLQRLRTK 187 + T++E + + K Sbjct: 1580 VCVRTVEERLEEIKEFK 1596 >gi|189199576|ref|XP_001936125.1| DNA repair protein rad5 [Pyrenophora tritici-repentis Pt-1C-BFP] gi|187983224|gb|EDU48712.1| DNA repair protein rad5 [Pyrenophora tritici-repentis Pt-1C-BFP] Length = 553 Score = 65.0 bits (157), Expect = 6e-09, Method: Composition-based stats. Identities = 25/131 (19%), Positives = 44/131 (33%), Gaps = 16/131 (12%) Query: 72 IVAYHFNSDLARLQKAFPQGRT----------LDKDPCTIQEWNEGKIP-LLFAHPASCG 120 I+ + + L F + K + ++ E +L + Sbjct: 392 IIFSFWKTTLDITASLFDKYSISCFRIHGTLSASKRSRILTDFEESSTTRVLLITLGTGA 451 Query: 121 HGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELV 180 G N NI+ W+ Q I R+ + G +RAV + I ++TI+E V Sbjct: 452 VGSNKLKAANIIHIVEPQWNPSVENQAIGRVI-----RLGQERAVTIIRYIMKDTIEEAV 506 Query: 181 LQRLRTKSTIQ 191 R K + Sbjct: 507 QSRQLRKLQLA 517 >gi|170290318|ref|YP_001737134.1| helicase domain-containing protein [Candidatus Korarchaeum cryptofilum OPF8] gi|170174398|gb|ACB07451.1| helicase domain protein [Candidatus Korarchaeum cryptofilum OPF8] Length = 975 Score = 65.0 bits (157), Expect = 6e-09, Method: Composition-based stats. Identities = 33/162 (20%), Positives = 61/162 (37%), Gaps = 22/162 (13%) Query: 42 YDEEKHWKEVHDEKIKALEVIIEKA-NAAPIIVAYHFNSDLARLQKA-----FPQGRTLD 95 + + D K+KAL ++++ + +IV + L + K +P+G L Sbjct: 384 VEMARDIMREGDSKLKALISLLDEVKEDSKVIVFTEYKDTLDYIMKKLLNEGWPEGSILR 443 Query: 96 KDPCTIQE----------WNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQ 145 + + + GLNLQ +IL+ + + W L + + Sbjct: 444 LSSDETADEKKFMEIRRAFERDPRARVLIATDVAAEGLNLQV-AHILINYEVPWSLIKLE 502 Query: 146 QMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTK 187 Q I R+ + G +R V +Y L N D L+ + K Sbjct: 503 QRIGRVW-----RLGQRREVEIYTLFMANKADSTALRSIYEK 539 >gi|331013606|gb|EGH93662.1| SNF2-related:helicase [Pseudomonas syringae pv. tabaci ATCC 11528] Length = 316 Score = 65.0 bits (157), Expect = 6e-09, Method: Composition-based stats. Identities = 27/142 (19%), Positives = 53/142 (37%), Gaps = 18/142 (12%) Query: 55 KIKALEVIIEKAN-AAPIIVAYHFNSDLARLQKAFPQGRT----------LDKDPCTIQE 103 K++ L ++ + + +I+ + +A L++ + K I Sbjct: 179 KVRILADLMAELDVDDKVILFCEYQESVATLREHCLKMGVGCVTLVGSDSPKKRQKAIDA 238 Query: 104 WN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFK 162 + + + ++ G G NL N + F L W Q +R + G Sbjct: 239 FQQDPDCRVFIGTRSAAGTGYNLT-AANYVFFLGLPWTPGLQDQAEDR-----AYRNGQL 292 Query: 163 RAVFVYYLIAQNTIDELVLQRL 184 R V V +A++TID+ + Q L Sbjct: 293 RVVVVKIPLAEDTIDQQLWQML 314 >gi|317144593|ref|XP_001820221.2| SNF2 family helicase [Aspergillus oryzae RIB40] Length = 1183 Score = 65.0 bits (157), Expect = 6e-09, Method: Composition-based stats. Identities = 28/165 (16%), Positives = 55/165 (33%), Gaps = 25/165 (15%) Query: 44 EEKHWKEVHDEKIKALEV-IIEKANAAPIIVAY-------HFNSDLA------RLQKAFP 89 + K+ L ++E II+ Y L R+ + Sbjct: 898 AQTKLVATTSAKLTYLLDRVLELHTEEKIIIFYDNNNSAFWIAEGLELLGVDFRIYASTL 957 Query: 90 QGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIE 149 + + +E + +L HGL++ + + + W Q I+ Sbjct: 958 KPKVRAAYLELFREQE--DVRVLLMDLHQASHGLHIANASRVFI-VNPIWQPNVESQAIK 1014 Query: 150 RIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLR---TKSTIQ 191 R + G R VFV L+ + T+++ +L+R + K Q Sbjct: 1015 R-----AHRIGQTRPVFVETLVLKGTLEDKMLERRKAMSEKEMQQ 1054 >gi|238485918|ref|XP_002374197.1| SNF2 family helicase, putative [Aspergillus flavus NRRL3357] gi|220699076|gb|EED55415.1| SNF2 family helicase, putative [Aspergillus flavus NRRL3357] Length = 806 Score = 65.0 bits (157), Expect = 6e-09, Method: Composition-based stats. Identities = 28/165 (16%), Positives = 55/165 (33%), Gaps = 25/165 (15%) Query: 44 EEKHWKEVHDEKIKALEV-IIEKANAAPIIVAY-------HFNSDLA------RLQKAFP 89 + K+ L ++E II+ Y L R+ + Sbjct: 521 AQTKLVATTSAKLTYLLDRVLELHTEEKIIIFYDNNNSAFWIAEGLELLGVDFRIYASTL 580 Query: 90 QGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIE 149 + + +E + +L HGL++ + + + W Q I+ Sbjct: 581 KPKVRAAYLELFREQE--DVRVLLMDLHQASHGLHIANASRVFI-VNPIWQPNVESQAIK 637 Query: 150 RIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLR---TKSTIQ 191 R + G R VFV L+ + T+++ +L+R + K Q Sbjct: 638 R-----AHRIGQTRPVFVETLVLKGTLEDKMLERRKAMSEKEMQQ 677 >gi|83768080|dbj|BAE58219.1| unnamed protein product [Aspergillus oryzae] Length = 1021 Score = 65.0 bits (157), Expect = 6e-09, Method: Composition-based stats. Identities = 28/165 (16%), Positives = 55/165 (33%), Gaps = 25/165 (15%) Query: 44 EEKHWKEVHDEKIKALEV-IIEKANAAPIIVAY-------HFNSDLA------RLQKAFP 89 + K+ L ++E II+ Y L R+ + Sbjct: 736 AQTKLVATTSAKLTYLLDRVLELHTEEKIIIFYDNNNSAFWIAEGLELLGVDFRIYASTL 795 Query: 90 QGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIE 149 + + +E + +L HGL++ + + + W Q I+ Sbjct: 796 KPKVRAAYLELFREQE--DVRVLLMDLHQASHGLHIANASRVFI-VNPIWQPNVESQAIK 852 Query: 150 RIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLR---TKSTIQ 191 R + G R VFV L+ + T+++ +L+R + K Q Sbjct: 853 R-----AHRIGQTRPVFVETLVLKGTLEDKMLERRKAMSEKEMQQ 892 >gi|220930423|ref|YP_002507332.1| helicase [Clostridium cellulolyticum H10] gi|220000751|gb|ACL77352.1| helicase domain protein [Clostridium cellulolyticum H10] Length = 460 Score = 65.0 bits (157), Expect = 6e-09, Method: Composition-based stats. Identities = 27/155 (17%), Positives = 65/155 (41%), Gaps = 15/155 (9%) Query: 53 DEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQE------WNE 106 D ++K I + + ++ NS+ L+ A P + + +++ Sbjct: 275 DLRVKKAADIAQSVDGQ-CLIWCDLNSESEMLKNAIPGAVEVKGSDSPEHKKTAMLGFSK 333 Query: 107 GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVF 166 G++ L P+ G G+N Q + ++F L E++ Q + R + G K+ V Sbjct: 334 GEVKDLVTKPSIAGFGMNWQTCSD-MIFVGLSDSYEQYYQAVRRC-----YRFGQKKPVN 387 Query: 167 VYYLIA--QNTIDELVLQRLRTKSTIQDLLLNALK 199 V+ +I+ + + + + ++ +Q+ ++ K Sbjct: 388 VHIVISAKEGCVKDNIERKTSDSLKMQNAMIEYTK 422 >gi|125984352|ref|XP_001355940.1| GA17662 [Drosophila pseudoobscura pseudoobscura] gi|54644258|gb|EAL32999.1| GA17662 [Drosophila pseudoobscura pseudoobscura] Length = 747 Score = 65.0 bits (157), Expect = 6e-09, Method: Composition-based stats. Identities = 25/147 (17%), Positives = 50/147 (34%), Gaps = 19/147 (12%) Query: 59 LEVIIEKANAAPIIVAYHFNSDLARLQKAF---------PQGRTLDKDPCTI--QEWNEG 107 L+ ++++ IV H + + G+T + N+ Sbjct: 520 LKSLVKEQ--KKFIVFAHHRVMMDAISDCLSALNVHHIRIDGQTRSDLRADMVSAFQNKS 577 Query: 108 KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFV 167 + +C G+ L ++VF L W+ Q +R + G + V Sbjct: 578 SCRVAVLSLKACNAGITLT-AAELIVFAELDWNPSTLAQA-----ESRAHRIGQTKTVIC 631 Query: 168 YYLIAQNTIDELVLQRLRTKSTIQDLL 194 YL+A T D+ + + L K + + Sbjct: 632 RYLLANETADDTIWKMLINKQKVLSQV 658 >gi|149710126|ref|XP_001490055.1| PREDICTED: SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a-like 1 [Equus caballus] Length = 948 Score = 65.0 bits (157), Expect = 7e-09, Method: Composition-based stats. Identities = 29/177 (16%), Positives = 63/177 (35%), Gaps = 18/177 (10%) Query: 22 AFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDL 81 A + K Q A+ + + I+ + ++E +V H L Sbjct: 681 AAKEMTTKNKTKQQQKEALILFFNRTAEAKIPCVIEYILDLLES-GREKFLVFAHHKVVL 739 Query: 82 ARLQKAFPQ-----------GRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGN 130 + K + + D++ Q + + + GL + Sbjct: 740 DAITKELERKHVQHIRIDGATSSADREALCQQFQLSERHAVAVLSITAANMGLTF-SSAD 798 Query: 131 ILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTK 187 ++VF L+W+ Q +R+ + G R+V ++YL+A+ T D+ + ++ K Sbjct: 799 LVVFAELFWNPGVLIQAEDRV-----HRIGQSRSVGIHYLVARGTADDYLWPLIQEK 850 >gi|148553123|ref|YP_001260705.1| helicase domain-containing protein [Sphingomonas wittichii RW1] gi|148498313|gb|ABQ66567.1| helicase domain protein [Sphingomonas wittichii RW1] Length = 1167 Score = 65.0 bits (157), Expect = 7e-09, Method: Composition-based stats. Identities = 37/185 (20%), Positives = 72/185 (38%), Gaps = 21/185 (11%) Query: 17 GENIEAFNSASKTVKCLQ-LANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAY 75 E +E +T+K L+ +A G + + W +++ L + N +I+ Sbjct: 456 AETVEQLALEVETLKGLEAMALGVLRSGVDTKWSQLNRILDDDLM-VDAAGNRRKLIIFT 514 Query: 76 HFNSDLARLQKAFP-------------QGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHG 122 L L G + ++ I+ + + K L+ + G G Sbjct: 515 EPKDTLHYLLDKVRARLGNAEAVDVIHGGVSREERRKVIERFMQDKDLLVLIANDAAGEG 574 Query: 123 LNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQ 182 +NLQ G +++V + L W+ + +Q RI + G ++ L+A +T + V Sbjct: 575 VNLQRG-HLMVNYDLPWNPNKLEQRFGRI-----HRIGQTEVCHLWNLVAADTREGEVYA 628 Query: 183 RLRTK 187 RL K Sbjct: 629 RLLEK 633 >gi|237722627|ref|ZP_04553108.1| helicase domain-containing protein [Bacteroides sp. 2_2_4] gi|229448437|gb|EEO54228.1| helicase domain-containing protein [Bacteroides sp. 2_2_4] Length = 1139 Score = 64.6 bits (156), Expect = 7e-09, Method: Composition-based stats. Identities = 36/180 (20%), Positives = 75/180 (41%), Gaps = 27/180 (15%) Query: 24 NSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKA---NAAPIIVAYHFNSD 80 A + + ++AN ++E ++K L+ +++ N +++ Sbjct: 459 TEAKEVKRLYEMANSLYNQNQE-------EKKYIELKELLKSQGVINGEKLVIFTEHKDT 511 Query: 81 LARLQKAFP----------QGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGN 130 L L++ G ++D+ ++ + +L A + G G+NLQ+ Sbjct: 512 LLYLRERLSNNGYKVAVIHGGLSVDERRQAQWDFMSPETQILIA-TDAAGEGINLQF-CR 569 Query: 131 ILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 +L+ + + W+ +Q + RI + G K V V+ ++A NT + VL RL K I Sbjct: 570 LLINWDIPWNPNRLEQRMGRI-----HRYGQKNDVLVFNVVADNTREGQVLSRLLIKLDI 624 >gi|221484235|gb|EEE22531.1| helicase, putative [Toxoplasma gondii GT1] Length = 1345 Score = 64.6 bits (156), Expect = 7e-09, Method: Composition-based stats. Identities = 31/189 (16%), Positives = 68/189 (35%), Gaps = 34/189 (17%) Query: 37 NGAVYYDEEKHWKEVHDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAFPQGRTL 94 + +V ++ KI A+E I+ ++V + L ++ + + Sbjct: 447 SDSVAEGDDAESLLRDSSKIAAVEAILSFYLPRQEKVVVFSFSTAMLDLVEDYLDEKGIV 506 Query: 95 ----------DKDPCTIQEW------NEGKIP---------LLFAHPASCGHGLNLQYGG 129 + I + N + P + + G+GL L + Sbjct: 507 SARLDGRMGDGERRAAIAAFSAQPSENARQSPQGSHEACAAVFLVSVRAGGYGLTLSHCA 566 Query: 130 NILVFF--SLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTK 187 ++ VF + + +Q I R+ + G + V V LI ++T++E++ R R K Sbjct: 567 SVCVFLEGGGDGNPQVERQAIARL-----YRQGQTKKVKVIRLITRSTVEEVMYWRGRQK 621 Query: 188 STIQDLLLN 196 + +L+ Sbjct: 622 LKLVADVLS 630 >gi|164661227|ref|XP_001731736.1| hypothetical protein MGL_1004 [Malassezia globosa CBS 7966] gi|159105637|gb|EDP44522.1| hypothetical protein MGL_1004 [Malassezia globosa CBS 7966] Length = 1610 Score = 64.6 bits (156), Expect = 7e-09, Method: Composition-based stats. Identities = 23/139 (16%), Positives = 47/139 (33%), Gaps = 17/139 (12%) Query: 63 IEKANAAPIIVAYHF---------NSDLARLQKAFPQGRTLDKDPCTIQEWN-EGKIPLL 112 I+ +V F N + L A G + + + + + +L Sbjct: 1384 IQCTTGEKSLVFSSFARGLDLVASNLERHGLAYARVDGTGGKRSSAAVHAFQHKPDVRVL 1443 Query: 113 FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIA 172 H + GLNL + + Q I R+ + G R +VY + Sbjct: 1444 LLHSEAQSAGLNL-LAATHMFLLEPLLNHAMELQAIGRV-----HRIGQTRPTYVYGYMV 1497 Query: 173 QNTIDELVLQ-RLRTKSTI 190 ++T++E ++ K ++ Sbjct: 1498 RDTVEERIVALAAERKQSL 1516 >gi|152986239|ref|YP_001351355.1| SNF2 family DNA/RNA helicase [Pseudomonas aeruginosa PA7] gi|150961397|gb|ABR83422.1| superfamily II DNA/RNA helicase, SNF2 family [Pseudomonas aeruginosa PA7] Length = 1010 Score = 64.6 bits (156), Expect = 7e-09, Method: Composition-based stats. Identities = 35/231 (15%), Positives = 82/231 (35%), Gaps = 44/231 (19%) Query: 1 MKQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLA-------NGAVYYDEEKHWKEV-- 51 ++ Y + + + + ++ A+Y ++ KH +++ Sbjct: 772 LQAYDEVLDSYRARRASAEDMRGTALAALTQLRSISLHPRLENESALYCEDGKHARQLMM 831 Query: 52 HDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQ------GRTLDKDPCT--- 100 K+ L ++++ + +I+ L R+ K + ++ D Sbjct: 832 ESGKLAVLLQLLDEIRSKGEKVILFMMTKR-LQRVLKLWLDQIYDLNVAVINGDTQAVAT 890 Query: 101 ----------IQEWNEGK-IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIE 149 I E+ +L P + G GL + G N +V W+ + Q + Sbjct: 891 RAEDMTRKKLIAEFEAKSGFNILIMSPVAAGVGLTV-IGANHVVHLERHWNPAKEAQASD 949 Query: 150 RIGVTRQRQAGFKRAVFVYYLIAQ-----NTIDELVLQRLRTKSTIQDLLL 195 R+ + G + VF+ +L A ++ D + + LR K ++D ++ Sbjct: 950 RV-----YRIGQTKPVFI-HLPAVTHPQFDSFDVHLDRLLRGKLMLKDAVV 994 >gi|326426540|gb|EGD72110.1| hypothetical protein PTSG_11548 [Salpingoeca sp. ATCC 50818] Length = 930 Score = 64.6 bits (156), Expect = 7e-09, Method: Composition-based stats. Identities = 33/228 (14%), Positives = 82/228 (35%), Gaps = 35/228 (15%) Query: 3 QYHKFQRELYCDL---QGENIEAFNSASKTVKCLQLA-NGAVYYDEEKHWKEVHDEKIKA 58 + ++++ L + + + + K K L+ N D + + ++ ++ Sbjct: 212 MIRRLKKDVLSQLPPKRRQRVTVEVTNKKLCKLLEAGFNELKRLDSDPNTQQFESHRL-- 269 Query: 59 LEVIIEKAN-----------AAPIIVAYHFNSDLARLQKA---------FPQGRT-LDKD 97 L+ + + +V + + L L++A G T + + Sbjct: 270 LQSLFHDTSTAKMDSGMCDAGGKFLVFAYHLNMLKALEEAVASQGVEYIMIVGETPVHER 329 Query: 98 PCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 ++++ + + + G+ L + +VF L W +Q +R Sbjct: 330 HDMVKKFQASNRCRVAILSLLAASQGITLT-AASTVVFAELHWTPGIIEQAEDR-----A 383 Query: 157 RQAGFKRA-VFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETI 203 + G V ++YL+A NT+D+++ L K + LN + + Sbjct: 384 HRIGQTDTSVNIHYLVAPNTLDDILWSTLSRKVGVVSTTLNGERSRLV 431 >gi|282598823|ref|YP_003359142.1| putative helicase [Clavibacter phage CMP1] gi|262212611|gb|ACY35947.1| putative helicase [Clavibacter phage CMP1] Length = 533 Score = 64.6 bits (156), Expect = 7e-09, Method: Composition-based stats. Identities = 43/224 (19%), Positives = 75/224 (33%), Gaps = 31/224 (13%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANG-----AVYYDEEKHWKEVHDEKI 56 + + + + L+ A + ++ Q+ DE++ D + Sbjct: 309 RMIKQMETDYIAWLEDNPTVAKLPVTARMRIRQMTLAVPSVIPATEDEKEEVYFDVDCES 368 Query: 57 KALEVIIEKANAAP---IIVAYHFNSDLARLQKAFP-----------QGRTLDKDPCTIQ 102 L+ I E A P ++ LA + F +D + Sbjct: 369 PTLDDIEEWLKAHPDEKVLFLAQSQKFLAEATRRFKAKGYQAFEWSGMASEASRD-VAKE 427 Query: 103 EWNEGKIPLLFAHPASCGHGLN-LQYGGNILVFFSLWWDLEE-HQQMIERIGVTRQRQAG 160 ++ G + L+F S G G++ LQ NIL W LE E R + G Sbjct: 428 QFKNGSLQLVFGQVQSIGTGIDGLQSATNIL------WSLETGDDATTEIQAEGRLDRRG 481 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIH 204 R V I +IDE V+ + K + +LK+E + Sbjct: 482 QVRGVVHIKSIRAGSIDENVMGKQLEKRLAMNA---SLKRECVG 522 >gi|291461005|ref|ZP_06026388.2| SNF2-related protein [Fusobacterium periodonticum ATCC 33693] gi|291379579|gb|EFE87097.1| SNF2-related protein [Fusobacterium periodonticum ATCC 33693] Length = 1166 Score = 64.6 bits (156), Expect = 7e-09, Method: Composition-based stats. Identities = 23/125 (18%), Positives = 54/125 (43%), Gaps = 21/125 (16%) Query: 72 IVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGK-IPLLFAHPASCGHGLNLQYGGN 130 ++ Y F+ ++ + + + ++ + + ++ P + G GLN+ N Sbjct: 844 VIKYWFDIEVGIVNGDADKTS----RRRILDDFRKKEGFNVIILSPEAAGVGLNIVE-AN 898 Query: 131 ILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQN----------TIDELV 180 ++ ++ W+ + +Q +R + G K+ V+VYY I N T+DE + Sbjct: 899 HVIHYTRHWNPAKEEQATDR-----AYRIGQKKDVYVYYPIISNVEKIERDEYRTVDEWI 953 Query: 181 LQRLR 185 ++L Sbjct: 954 RKQLE 958 >gi|154500303|ref|ZP_02038341.1| hypothetical protein BACCAP_03970 [Bacteroides capillosus ATCC 29799] gi|150271035|gb|EDM98309.1| hypothetical protein BACCAP_03970 [Bacteroides capillosus ATCC 29799] Length = 1182 Score = 64.6 bits (156), Expect = 7e-09, Method: Composition-based stats. Identities = 32/149 (21%), Positives = 58/149 (38%), Gaps = 22/149 (14%) Query: 52 HDEKIKALEVIIEKANAA---PIIVAYHFNSDLARLQKAFP---------QGRTLDKDPC 99 D K +A+ +IE+ A +I+ F LA L++ G D+D Sbjct: 673 DDPKFEAMLRVIEEKQAESNNKVIIFSSFKHTLAYLRRKLESQGLRVSQIDGSVRDEDRV 732 Query: 100 TIQEW--NEGKIPLLF---AHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 +++ + P GL+ Q+ ++++ + L W+ +Q I RI Sbjct: 733 LLRDRFKQDRDCPEALDILLFTEVGCEGLDYQF-CDMMINYDLPWNPMRIEQRIGRID-- 789 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQR 183 R+ V +Y +I TID + R Sbjct: 790 --RRGQKSEVVNIYNMITSGTIDADIYSR 816 >gi|323449406|gb|EGB05294.1| hypothetical protein AURANDRAFT_17107 [Aureococcus anophagefferens] Length = 92 Score = 64.6 bits (156), Expect = 8e-09, Method: Composition-based stats. Identities = 26/92 (28%), Positives = 44/92 (47%), Gaps = 6/92 (6%) Query: 106 EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 + +L A A+ G GLN+ N+L F WW+ H Q ++R + G R V Sbjct: 7 APSVNVLLATVATAGVGLNIVEANNVL-FLDRWWNPTVHDQAMDR-----THRLGQTRPV 60 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 V +L +T+DE++ + KS ++L + Sbjct: 61 DVRFLDGVDTVDEVMRAINKFKSDNAQVILAS 92 >gi|154340832|ref|XP_001566369.1| hypothetical protein [Leishmania braziliensis MHOM/BR/75/M2904] gi|134063692|emb|CAM39877.1| conserved hypothetical protein [Leishmania braziliensis MHOM/BR/75/M2904] Length = 1591 Score = 64.6 bits (156), Expect = 8e-09, Method: Composition-based stats. Identities = 20/145 (13%), Positives = 48/145 (33%), Gaps = 17/145 (11%) Query: 63 IEKANAAPIIVAYHFNSDLARLQKAFPQ----GRTLDKDPCTIQE-------WNEGKIPL 111 I + +++ + S L + + + +L + + + Sbjct: 504 IVREQREKVVIFSQYLSHLRLMAQLLAREGISAPSLTGTSSDTERCRCIAELQSNDACRV 563 Query: 112 LFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLI 171 L + G G+ L + + + W+ + Q R+ + G R V VY L Sbjct: 564 LLCSVRAGGVGIKLT-AASHCILLDVSWNPTDDVQATYRL-----YRYGQLRPVNVYRLA 617 Query: 172 AQNTIDELVLQRLRTKSTIQDLLLN 196 T + +V ++ +Q + + Sbjct: 618 TWGTSEHVVFAYALQRAWLQKKIAD 642 >gi|322815488|gb|EFZ24135.1| DNA repair protein, putative [Trypanosoma cruzi] Length = 142 Score = 64.6 bits (156), Expect = 8e-09, Method: Composition-based stats. Identities = 18/105 (17%), Positives = 43/105 (40%), Gaps = 7/105 (6%) Query: 94 LDKDPCTIQEW-NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIG 152 L + +Q + ++ + + + G GLNLQ N ++ WW+ Q +R Sbjct: 25 LSQRQAVLQAFLHDPGVRAILISLKAGGEGLNLQV-ANHVILVDPWWNPAVEMQAAQR-- 81 Query: 153 VTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + G + V V + + +++E ++ K + + ++ Sbjct: 82 ---AHRIGQTKPVRVVRFVVERSVEERMMDLQDKKMLVIEGTIDG 123 >gi|195161250|ref|XP_002021481.1| GL26533 [Drosophila persimilis] gi|194103281|gb|EDW25324.1| GL26533 [Drosophila persimilis] Length = 747 Score = 64.6 bits (156), Expect = 8e-09, Method: Composition-based stats. Identities = 25/143 (17%), Positives = 49/143 (34%), Gaps = 19/143 (13%) Query: 59 LEVIIEKANAAPIIVAYHFNSDLARLQKAF---------PQGRTLDKDPCTI--QEWNEG 107 L+ ++++ IV H + + G+T + N+ Sbjct: 520 LKSLVKEQ--KKFIVFAHHRVMMDAISDCLSALNVHHIRIDGQTRSDLRADMVSAFQNKS 577 Query: 108 KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFV 167 + +C G+ L ++VF L W+ Q +R + G + V Sbjct: 578 SCRVAVLSLKACNAGITLT-AAELIVFAELDWNPSTLAQA-----ESRAHRIGQTKTVIC 631 Query: 168 YYLIAQNTIDELVLQRLRTKSTI 190 YL+A T D+ + + L K + Sbjct: 632 RYLLANETADDTIWKMLINKQKV 654 >gi|157817600|ref|NP_001101692.1| SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1 [Rattus norvegicus] gi|221222728|sp|B4F769|SMAL1_RAT RecName: Full=SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1; AltName: Full=HepA-related protein; AltName: Full=Sucrose nonfermenting protein 2-like 1 gi|149016063|gb|EDL75309.1| Swi/SNF related matrix associated, actin dependent regulator of chromatin, subfamily a-like 1 (predicted) [Rattus norvegicus] gi|195540216|gb|AAI68154.1| Smarcal1 protein [Rattus norvegicus] Length = 910 Score = 64.6 bits (156), Expect = 8e-09, Method: Composition-based stats. Identities = 27/154 (17%), Positives = 57/154 (37%), Gaps = 18/154 (11%) Query: 45 EKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFP---------QGRTLD 95 + + I+ + ++E +V H L + K G T Sbjct: 659 NRTAEAKIPCVIEYILDLLES-GREKFLVFAHHKVLLDAIAKELERKNVQHIRIDGSTPS 717 Query: 96 KDPCTI-QEWNEGK-IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGV 153 D + Q++ K + + GL +++VF L+W+ Q +R+ Sbjct: 718 ADREDLCQQFQLSKGHTVAVLSITAANMGLTF-SSADLVVFAELFWNPGVLIQAEDRV-- 774 Query: 154 TRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTK 187 + G +V ++YL+A+ T D+ + ++ K Sbjct: 775 ---HRIGQTNSVGIHYLVAKGTADDYLWPLIQEK 805 >gi|310790973|gb|EFQ26506.1| hypothetical protein GLRG_01650 [Glomerella graminicola M1.001] Length = 1142 Score = 64.6 bits (156), Expect = 8e-09, Method: Composition-based stats. Identities = 30/163 (18%), Positives = 66/163 (40%), Gaps = 22/163 (13%) Query: 43 DEEKHWKEVH--DEKIKALEV-IIEKANAAPIIVAY------HFNS-DLARL-QKAFPQG 91 D+ K + V K+ L I+E +I+ Y + + L + + F Sbjct: 860 DDLKKARLVSTVSAKLSYLIDAIVEHQEREKLIIFYENENVAWYLAGILEVIHVRHFIYA 919 Query: 92 RTL--DKDPCTIQEWNE-GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMI 148 + L ++ I +N ++ ++ GL++ + + F + + + Q I Sbjct: 920 KKLSYERKMSYINTFNNDPELRVILMDLTQAAVGLDM-KAASRIYFINPVLNPQIQTQAI 978 Query: 149 ERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQ 191 R R+ ++ V V L+ + +I+E++++R KS Q Sbjct: 979 GR-----ARRISQQKPVTVETLVLRGSIEEVIVER--KKSMSQ 1014 >gi|299471940|emb|CBN79620.1| harp (smarcal1)-related [Ectocarpus siliculosus] Length = 1197 Score = 64.6 bits (156), Expect = 8e-09, Method: Composition-based stats. Identities = 27/139 (19%), Positives = 52/139 (37%), Gaps = 18/139 (12%) Query: 64 EKANAAPIIVAYHFNSDLARLQKAFPQ---------GRTLDKDPCTI--QEWNEGKIPLL 112 + ++V H + L++ + G T K I + + ++ Sbjct: 784 KAKEPRKLVVFAHHKEVMDALERGLDEIGVCSVRIDGSTAQKKRQPIVDRFQGSASVSVI 843 Query: 113 FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFK-RAVFVYYLI 171 + G G+ L + VF L+W Q +RI + G K + V + YL+ Sbjct: 844 LLSITAAGVGITLT-AASCAVFAELYWTPGSMAQAEDRI-----HRIGQKAKTVLIRYLV 897 Query: 172 AQNTIDELVLQRLRTKSTI 190 + T+D+ V+ + K T Sbjct: 898 GRGTMDDGVISTIHRKQTT 916 >gi|258652903|ref|YP_003202059.1| helicase domain-containing protein [Nakamurella multipartita DSM 44233] gi|258556128|gb|ACV79070.1| helicase domain protein [Nakamurella multipartita DSM 44233] Length = 648 Score = 64.6 bits (156), Expect = 8e-09, Method: Composition-based stats. Identities = 26/97 (26%), Positives = 39/97 (40%), Gaps = 8/97 (8%) Query: 102 QEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLW-WDLEEHQQMIERIGVTRQRQAG 160 E+ G++PLL + G G+ L G + + + W E Q +R + G Sbjct: 520 DEYQAGRLPLLVCSIPTVGVGVTLTRGCD--AWMAETSWTPAEISQAEDRQW-----RRG 572 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 R V V I T+DE V L K+ D +L Sbjct: 573 QSRNVVVTTFIGLGTLDERVQDSLGRKADDLDQVLTG 609 >gi|219848036|ref|YP_002462469.1| helicase domain-containing protein [Chloroflexus aggregans DSM 9485] gi|219542295|gb|ACL24033.1| helicase domain protein [Chloroflexus aggregans DSM 9485] Length = 966 Score = 64.6 bits (156), Expect = 8e-09, Method: Composition-based stats. Identities = 27/158 (17%), Positives = 56/158 (35%), Gaps = 26/158 (16%) Query: 50 EVHDEKIKALEVII---EKANAAP---IIVAYHFNSDLARLQKAFPQGRT---------- 93 + D K +AL I + P ++V F L + Q Sbjct: 477 QGPDAKAEALLDWIYRLQAEEGDPNLKVLVFTEFVPTQEMLYEFLTQRGFTVVCLNGAMD 536 Query: 94 LDKDPCTIQEW-NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIG 152 + + N +I + G GLNLQ+ ++++ + + W+ +Q I R+ Sbjct: 537 MAARKQVQDAFANNARI---LISTDAGGEGLNLQF-CHVVINYDIPWNPMRLEQRIGRVD 592 Query: 153 VTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 + G V + Q++++ + + L K + Sbjct: 593 -----RIGQTHTVRAVNFVFQDSVEHRIREVLEQKLAV 625 >gi|171692537|ref|XP_001911193.1| hypothetical protein [Podospora anserina S mat+] gi|170946217|emb|CAP73018.1| unnamed protein product [Podospora anserina S mat+] Length = 1920 Score = 64.6 bits (156), Expect = 8e-09, Method: Composition-based stats. Identities = 19/158 (12%), Positives = 47/158 (29%), Gaps = 47/158 (29%) Query: 51 VHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQKAF---------PQGRTL--DKD 97 K+ L+ ++ + +++ + + +++ G T D+ Sbjct: 1662 TDSGKLAKLDELLRQLKEGGHRVLLYFQMTRMIDLMEEYLTYCNYRYCRLDGSTKLEDRR 1721 Query: 98 PCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 +I + + + R Sbjct: 1722 DTVSDFQTRPEIFIFLLSTRA----------------------------------MDRAH 1747 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 + G + V VY LI + TI+E + +R K +Q +++ Sbjct: 1748 RLGQTKQVTVYRLITRGTIEERIRKRAMQKEEVQRVVI 1785 >gi|86739797|ref|YP_480197.1| helicase-like protein [Frankia sp. CcI3] gi|86566659|gb|ABD10468.1| helicase-like [Frankia sp. CcI3] Length = 829 Score = 64.6 bits (156), Expect = 8e-09, Method: Composition-based stats. Identities = 44/194 (22%), Positives = 75/194 (38%), Gaps = 32/194 (16%) Query: 10 ELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAA 69 + +L E IE KT K ++ A ++ W E+ + EV+ AN Sbjct: 442 QTVEELNAELIELAE-LVKTAKIVRDAG------TDRKWTELSNILQD--EVLTADANGW 492 Query: 70 P--IIVAYHFNSDLARLQ-------------KAFPQGRTLDKDPCTIQEW-NEGKIPLLF 113 P +I+ L L+ +A G + +E+ + +L Sbjct: 493 PRKLIIFTEHRDTLDYLRARIGSLLGKPDAVRAIHGGVRRGERRQITEEFTKNRDVQILL 552 Query: 114 AHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQ 173 A + G GLNLQ +++V + L W+ +Q RI + G + ++ L+A Sbjct: 553 A-TNAAGEGLNLQ-AAHLMVNYDLPWNPNRIEQRFGRI-----HRIGQDKVCRLWNLVAS 605 Query: 174 NTIDELVLQRLRTK 187 NT + V RL K Sbjct: 606 NTREGEVFTRLLAK 619 >gi|328848807|gb|EGF98004.1| hypothetical protein MELLADRAFT_84096 [Melampsora larici-populina 98AG31] Length = 206 Score = 64.6 bits (156), Expect = 8e-09, Method: Composition-based stats. Identities = 16/86 (18%), Positives = 35/86 (40%), Gaps = 6/86 (6%) Query: 95 DKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 ++ + N I + G G N+ + + W+ + QQ I+R+ Sbjct: 90 ERTLQLNRFKNNNNIEAFIVSIEAGGVGFNMTC-TDEVYLMDAHWNPQIVQQAIDRL--- 145 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELV 180 Q G V VY+++A ++++ + Sbjct: 146 --HQIGQTHPVNVYHVVAGESVEQHL 169 >gi|323451563|gb|EGB07440.1| hypothetical protein AURANDRAFT_27712 [Aureococcus anophagefferens] Length = 205 Score = 64.6 bits (156), Expect = 8e-09, Method: Composition-based stats. Identities = 22/92 (23%), Positives = 39/92 (42%), Gaps = 6/92 (6%) Query: 87 AFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 F D+ + ++ G +L A S G GLN+ +VF W++ + H+Q Sbjct: 11 RFDGDVRADERGAVLDDFRAGGADVLLATVHSGGTGLNITR-ATTVVFTDRWFNPQVHEQ 69 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDE 178 ++R + G + V + A TID+ Sbjct: 70 AVDRC-----HRIGQTKPVAAAFYDAALTIDD 96 >gi|297711711|ref|XP_002832469.1| PREDICTED: chromodomain-helicase-DNA-binding protein 1-like, partial [Pongo abelii] Length = 90 Score = 64.6 bits (156), Expect = 8e-09, Method: Composition-based stats. Identities = 16/78 (20%), Positives = 39/78 (50%), Gaps = 6/78 (7%) Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 G G+NL + ++F ++ + Q R + G ++V V LI ++T++E+ Sbjct: 1 GVGMNLT-AADTVIFVDSDFNPQNDLQAAAR-----AHRIGQNKSVKVIRLIGRDTVEEI 54 Query: 180 VLQRLRTKSTIQDLLLNA 197 V ++ +K + ++++ Sbjct: 55 VYRKAASKLQLTNMIIEG 72 >gi|237739551|ref|ZP_04570032.1| conserved hypothetical protein [Fusobacterium sp. 2_1_31] gi|229423159|gb|EEO38206.1| conserved hypothetical protein [Fusobacterium sp. 2_1_31] Length = 1166 Score = 64.6 bits (156), Expect = 8e-09, Method: Composition-based stats. Identities = 23/125 (18%), Positives = 54/125 (43%), Gaps = 21/125 (16%) Query: 72 IVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGK-IPLLFAHPASCGHGLNLQYGGN 130 ++ Y F+ ++ + + + ++ + + ++ P + G GLN+ N Sbjct: 844 VIKYWFDIEVGIVNGDADKTS----RRRILDDFRKKEGFNVIILSPEAAGVGLNIVE-AN 898 Query: 131 ILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQN----------TIDELV 180 ++ ++ W+ + +Q +R + G K+ V+VYY I N T+DE + Sbjct: 899 HVIHYTRHWNPAKEEQATDR-----AYRIGQKKDVYVYYPIISNVERIERDEYRTVDEWI 953 Query: 181 LQRLR 185 ++L Sbjct: 954 RKQLE 958 >gi|189218338|ref|YP_001938980.1| Superfamily II DNA/RNA helicase, SNF2 family [Methylacidiphilum infernorum V4] gi|189185196|gb|ACD82381.1| Superfamily II DNA/RNA helicase, SNF2 family [Methylacidiphilum infernorum V4] Length = 940 Score = 64.6 bits (156), Expect = 8e-09, Method: Composition-based stats. Identities = 27/155 (17%), Positives = 56/155 (36%), Gaps = 20/155 (12%) Query: 50 EVHDEKIKALEVII------EKANAAPIIVAYHFNSD----LARLQKAFPQGRTLDKDPC 99 + D K +AL I E ++V F L + + L+ Sbjct: 462 QGPDAKAEALLDWIYRLQVEEGDPDLKVLVFTEFVPTQEMLYEFLTERGFKVVCLNGSMD 521 Query: 100 TIQE---WNE-GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTR 155 + N K + + G GLNLQ+ ++++ + + W+ +Q I R+ Sbjct: 522 MEERKRVQNAFAKDARILISTDAGGEGLNLQF-CHVVINYDIPWNPMRLEQRIGRVD--- 577 Query: 156 QRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 + G V + +++++ V + L K + Sbjct: 578 --RIGQTHTVHAINFVFEDSVEHRVREVLEEKLAV 610 >gi|239826792|ref|YP_002949416.1| helicase [Geobacillus sp. WCH70] gi|239807085|gb|ACS24150.1| helicase domain protein [Geobacillus sp. WCH70] Length = 1062 Score = 64.6 bits (156), Expect = 8e-09, Method: Composition-based stats. Identities = 31/148 (20%), Positives = 62/148 (41%), Gaps = 25/148 (16%) Query: 67 NAAPIIVAYHFNSDLARLQKAF-----PQGRTLDK-----DPCTIQEWNEGKIPLLFAHP 116 I++ L L+K + + K ++ + + P++ A Sbjct: 483 KGEKILIFTESTDTLHYLEKKLRAHGVEVAKIIGKFSMEERRKQVERFKH-ECPIMLA-T 540 Query: 117 ASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTI 176 + G +NLQ+ N ++ + + W+ + +Q + RI + G + VFV+ L+A NT Sbjct: 541 DAGGESINLQF-CNQMINYDIPWNPNKLEQRMGRI-----HRIGQRNEVFVFNLVAGNTR 594 Query: 177 DELVLQRLRTKSTIQDLLLNALKKETIH 204 + VL L TK + ++K+ H Sbjct: 595 EGDVLLTLMTK-------MEQMRKDLGH 615 >gi|322492699|emb|CBZ27976.1| conserved hypothetical protein [Leishmania mexicana MHOM/GT/2001/U1103] Length = 1872 Score = 64.6 bits (156), Expect = 9e-09, Method: Composition-based stats. Identities = 28/147 (19%), Positives = 54/147 (36%), Gaps = 23/147 (15%) Query: 54 EKIKALEVIIEKANAAPIIVAYHF------NSDLARLQKAFP----QGRTLDKDPCTIQE 103 ++ +E I ++V + D Q P +L + ++ Sbjct: 1673 AFLEVVEEIWRTQPDDGVLVFSKYPTFLKLAHDAVAGQGYAPHMVCGASSLAQRQRAMRA 1732 Query: 104 WN--EGKI-----PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 G +LF S GLNL + N ++F + QQ + R+ Sbjct: 1733 MQPPSGDSVLSQRRILFVTSRSANAGLNLTF-ANHVIFLEPNLNPAIEQQAVGRV----- 1786 Query: 157 RQAGFKRAVFVYYLIAQNTIDELVLQR 183 + G + V V++ A +TI+E++ +R Sbjct: 1787 HRFGQLKQVIVHHFFAPHTIEEVIYRR 1813 >gi|222637735|gb|EEE67867.1| hypothetical protein OsJ_25679 [Oryza sativa Japonica Group] Length = 1390 Score = 64.6 bits (156), Expect = 9e-09, Method: Composition-based stats. Identities = 34/162 (20%), Positives = 64/162 (39%), Gaps = 26/162 (16%) Query: 54 EKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQKAFPQG---------------RTLDK 96 K K + ++ K++ +++ H S + L K + L Sbjct: 1195 CKAKFVIDLLHKSSFRGERVLIFCHNVSPITFLVKLIEMVFGWRLGEEVLVLQGDQELPV 1254 Query: 97 DPCTIQEWN---EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGV 153 + ++N GK +L A +C G++L G + LV W+ + +Q I R Sbjct: 1255 RSDVMDKFNGDSAGKRKVLIASTTACAEGISLT-GASRLVMLDSEWNHSKTRQAIAR--- 1310 Query: 154 TRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 + G +R V+VY L+A T +E R K+ + ++ Sbjct: 1311 --AFRRGQERTVYVYLLVASGTWEEEKYNSNRRKAWMSKMVF 1350 >gi|218200306|gb|EEC82733.1| hypothetical protein OsI_27432 [Oryza sativa Indica Group] Length = 1770 Score = 64.6 bits (156), Expect = 9e-09, Method: Composition-based stats. Identities = 34/162 (20%), Positives = 64/162 (39%), Gaps = 26/162 (16%) Query: 54 EKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQKAFPQG---------------RTLDK 96 K K + ++ K++ +++ H S + L K + L Sbjct: 1575 CKAKFVIDLLHKSSFRGERVLIFCHNVSPITFLVKLIEMVFGWRLGEEVLVLQGDQELPV 1634 Query: 97 DPCTIQEWN---EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGV 153 + ++N GK +L A +C G++L G + LV W+ + +Q I R Sbjct: 1635 RSDVMDKFNGDSAGKRKVLIASTTACAEGISLT-GASRLVMLDSEWNHSKTRQAIAR--- 1690 Query: 154 TRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 + G +R V+VY L+A T +E R K+ + ++ Sbjct: 1691 --AFRRGQERTVYVYLLVASGTWEEEKYNSNRRKAWMSKMVF 1730 >gi|33146888|dbj|BAC79886.1| putative DNA repair protein rhp54 [Oryza sativa Japonica Group] Length = 637 Score = 64.6 bits (156), Expect = 9e-09, Method: Composition-based stats. Identities = 34/162 (20%), Positives = 64/162 (39%), Gaps = 26/162 (16%) Query: 54 EKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQKAFPQG---------------RTLDK 96 K K + ++ K++ +++ H S + L K + L Sbjct: 442 CKAKFVIDLLHKSSFRGERVLIFCHNVSPITFLVKLIEMVFGWRLGEEVLVLQGDQELPV 501 Query: 97 DPCTIQEWN---EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGV 153 + ++N GK +L A +C G++L G + LV W+ + +Q I R Sbjct: 502 RSDVMDKFNGDSAGKRKVLIASTTACAEGISLT-GASRLVMLDSEWNHSKTRQAIAR--- 557 Query: 154 TRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 + G +R V+VY L+A T +E R K+ + ++ Sbjct: 558 --AFRRGQERTVYVYLLVASGTWEEEKYNSNRRKAWMSKMVF 597 >gi|291392203|ref|XP_002712511.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent regulator of chromatin a-like 1 [Oryctolagus cuniculus] Length = 954 Score = 64.6 bits (156), Expect = 9e-09, Method: Composition-based stats. Identities = 27/143 (18%), Positives = 54/143 (37%), Gaps = 18/143 (12%) Query: 56 IKALEVIIEKANAAPIIVAYHFNSDLARLQKAFP---------QGRT--LDKDPCTIQEW 104 I+ + ++E +V H L + K G T D+D Q Sbjct: 714 IEYILDLLES-GREKFLVFAHHKVVLDAITKELERKHVQHIRIDGSTSSADRDALCQQFQ 772 Query: 105 NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA 164 + + + GL +++VF L+W+ Q +R+ + G + Sbjct: 773 LSERHTVAVLSITAANMGLTF-SSADLVVFAELFWNPGVLIQAEDRV-----HRIGQTNS 826 Query: 165 VFVYYLIAQNTIDELVLQRLRTK 187 V ++YL+A+ T D+ + ++ K Sbjct: 827 VGIHYLVAKGTADDYLWPLIQEK 849 >gi|261334482|emb|CBH17476.1| SNF2 DNA repair protein, putative [Trypanosoma brucei gambiense DAL972] Length = 967 Score = 64.6 bits (156), Expect = 9e-09, Method: Composition-based stats. Identities = 32/152 (21%), Positives = 55/152 (36%), Gaps = 23/152 (15%) Query: 60 EVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLD--------------KDPCTIQEWN 105 E ++E +IV H L ++ A + + + Sbjct: 494 EQLVETNE--KMIVFAHHRVMLDGIRDAIESVNPRKPLDYILICGNTAAAQREELLNHFR 551 Query: 106 -EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA 164 L CG GLNL ++VF L W+ H Q +R+ + G + Sbjct: 552 TSPTCHLAVLSMLVCGVGLNLTC-ATMVVFTELDWNPCTHLQCEDRV-----HRIGQSSS 605 Query: 165 VFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 F+ YL+A+ T D ++ L+ K ++ LL Sbjct: 606 CFIKYLLAEGTSDTIIWPLLQNKLSVTKALLE 637 >gi|170079584|ref|YP_001736217.1| DEAD/H helicase [Synechococcus sp. PCC 7002] gi|169887253|gb|ACB00962.1| DEAD/H helicase [Synechococcus sp. PCC 7002] Length = 1111 Score = 64.6 bits (156), Expect = 9e-09, Method: Composition-based stats. Identities = 38/176 (21%), Positives = 67/176 (38%), Gaps = 30/176 (17%) Query: 53 DEKIKALEVII--EKANAAPIIVAYHFNSDLARLQKAF--------------PQGRTLDK 96 D K L I+ E N I+ + L L+ + +D Sbjct: 793 DTKFAHLLTILRQEFQNRDSAIIFTQYTDTLDFLRGELRHIYDTQVACYSGRSGEKLIDG 852 Query: 97 DPCTI------QEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 + T+ +E+ +G+I +L S GLNLQ G +L+ + + W+ +Q I R Sbjct: 853 EWRTVPKERIKREFRQGEIKILLC-TESASEGLNLQTCG-VLINYDMPWNPMRVEQRIGR 910 Query: 151 IGVTRQRQAGFKRA-VFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIHV 205 I + G V ++ T++ V QRLR + ++ +L+ V Sbjct: 911 ID-----RIGQTFPRVIIHNFYYDGTVEARVYQRLRDRIHAFSSVVGSLQPILAKV 961 >gi|8778961|gb|AAD49766.2|AC007932_14 Contains similarity to HARP gene from Homo sapiens gb|AF210842. It contains SNF2 N-terminal PF|00176 and helicase C-terminal PF|00271 domains [Arabidopsis thaliana] Length = 592 Score = 64.6 bits (156), Expect = 9e-09, Method: Composition-based stats. Identities = 21/105 (20%), Positives = 47/105 (44%), Gaps = 8/105 (7%) Query: 93 TLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIG 152 LD I++ + +I + G G+ L + ++F L W + Q +R Sbjct: 441 VLDYLENVIED--KDEIKAAVLSIRAAGVGITLT-AASTVIFAELSWTPGDLIQAEDR-- 495 Query: 153 VTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + G +V ++YL+A +T+D+++ +++K +L+ Sbjct: 496 ---AHRIGQVSSVNIHYLLANDTVDDIIWDVVQSKLDNLGQMLDG 537 >gi|117928024|ref|YP_872575.1| helicase domain-containing protein [Acidothermus cellulolyticus 11B] gi|117648487|gb|ABK52589.1| helicase domain protein [Acidothermus cellulolyticus 11B] Length = 933 Score = 64.6 bits (156), Expect = 9e-09, Method: Composition-based stats. Identities = 26/156 (16%), Positives = 58/156 (37%), Gaps = 22/156 (14%) Query: 50 EVHDEKIKALEVIIEKANAAP------IIVAYHFNSDLARLQKAFPQ---------GRTL 94 + D K +AL I + A ++V F L + + G Sbjct: 455 QGPDAKAEALLDWIYRLQAEKGDPDLKVLVFTEFVPTQEMLYEFLTERGFEVVCLNGSMD 514 Query: 95 DKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 ++ +Q+ + + G GLNLQ+ ++++ + + W+ +Q I R+ Sbjct: 515 LEERKRVQDTFAKDARI-LISTDAGGEGLNLQF-CHVVINYDIPWNPMRLEQRIGRVD-- 570 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 + G V + +++++ V + L K + Sbjct: 571 ---RIGQTHTVRAINFVFEDSVEHRVCEVLEEKLAV 603 >gi|71755373|ref|XP_828601.1| SNF2 DNA repair protein [Trypanosoma brucei TREU927] gi|70833987|gb|EAN79489.1| SNF2 DNA repair protein, putative [Trypanosoma brucei] Length = 968 Score = 64.6 bits (156), Expect = 9e-09, Method: Composition-based stats. Identities = 32/152 (21%), Positives = 55/152 (36%), Gaps = 23/152 (15%) Query: 60 EVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLD--------------KDPCTIQEWN 105 E ++E +IV H L ++ A + + + Sbjct: 494 EQLVETNE--KMIVFAHHRVMLDGIRDAIESVNPRKPLDYILICGNTAAAQREELLNHFR 551 Query: 106 -EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA 164 L CG GLNL ++VF L W+ H Q +R+ + G + Sbjct: 552 TSPTCHLAVLSMLVCGVGLNLTC-ATMVVFTELDWNPCTHLQCEDRV-----HRIGQSSS 605 Query: 165 VFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 F+ YL+A+ T D ++ L+ K ++ LL Sbjct: 606 CFIKYLLAEGTSDTIIWPLLQNKLSVTKALLE 637 >gi|300123786|emb|CBK25057.2| unnamed protein product [Blastocystis hominis] Length = 169 Score = 64.2 bits (155), Expect = 1e-08, Method: Composition-based stats. Identities = 26/135 (19%), Positives = 56/135 (41%), Gaps = 17/135 (12%) Query: 49 KEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWN-EG 107 + +K + LE+I + ++ Y L + +K ++ + + Sbjct: 16 IVIFSQKPRCLEIIASQ-----LLDLYSNIHFLTVTSEL-----CAEKRMEYVEHFQTDN 65 Query: 108 KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFV 167 +I +L A CGHG +L ++++ ++ Q I+R + G K AV V Sbjct: 66 EISILLATTGICGHGFSLT-AASVVILVDHNFNPYVDVQAIDRC-----HRIGQKNAVMV 119 Query: 168 YYLIAQNTIDELVLQ 182 Y L++ +E +++ Sbjct: 120 YRLVSNEPNEERLMK 134 >gi|288575096|ref|ZP_06393453.1| helicase domain protein [Dethiosulfovibrio peptidovorans DSM 11002] gi|288570837|gb|EFC92394.1| helicase domain protein [Dethiosulfovibrio peptidovorans DSM 11002] Length = 955 Score = 64.2 bits (155), Expect = 1e-08, Method: Composition-based stats. Identities = 32/177 (18%), Positives = 66/177 (37%), Gaps = 32/177 (18%) Query: 27 SKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAA------PIIVAYHFNSD 80 ++ L LA A D K +AL +I + +++ F Sbjct: 454 AEVNALLDLARSA--------EIAGPDVKTEALMSLIFQLQGEENDDQLKLLIFTEFVPT 505 Query: 81 LARLQKAFPQGRT----------LDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGN 130 A LQ + +D+ +++ + + G GLNLQ+ + Sbjct: 506 QAMLQTFLEERGIPCAILNGSMSMDERRMAQRDF--RDNARILISTDAGGEGLNLQF-CH 562 Query: 131 ILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTK 187 ++V + L W+ +Q I R+ + G + V + +N+++ V + ++TK Sbjct: 563 VVVNYDLPWNPMRIEQRIGRVD-----RIGQSKIVRAVNFLYENSVEGRVREVIQTK 614 >gi|260818236|ref|XP_002604289.1| hypothetical protein BRAFLDRAFT_125252 [Branchiostoma floridae] gi|229289615|gb|EEN60300.1| hypothetical protein BRAFLDRAFT_125252 [Branchiostoma floridae] Length = 1645 Score = 64.2 bits (155), Expect = 1e-08, Method: Composition-based stats. Identities = 39/185 (21%), Positives = 68/185 (36%), Gaps = 28/185 (15%) Query: 32 CLQL-ANGAVYY-------DEEKHWKEVHDEKIKA----LEVIIEKANAAPIIVAYHFNS 79 C QL A G + Y E+ K H K++A L++I +K A +V + Sbjct: 1409 CRQLTATGDISYVSTEAKQQEDVDVKGSHSTKVEAVVRTLKLIRQKDPTAKSLVFSTWQD 1468 Query: 80 DLARLQKAFPQGRTLDKDPCTIQEWNEG--------KIPLLFAHPASCGHGLNLQYGGNI 131 L + A + + I + E I +L + HGLN+ ++ Sbjct: 1469 VLDVVATALRENNMEYRAINGIHRFQENITDFKYDSGIGVLLLPLHTGSHGLNIIEATHV 1528 Query: 132 LVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQ 191 L + + Q I R+ + G +A V+ + QNTI+E + K Sbjct: 1529 L-LVEPIINPAQEAQAIGRV-----HRIGQTKATVVHRFLVQNTIEERIHAM--KKHISA 1580 Query: 192 DLLLN 196 ++ Sbjct: 1581 SDSID 1585 >gi|119500356|ref|XP_001266935.1| SNF2 family helicase, putative [Neosartorya fischeri NRRL 181] gi|119415100|gb|EAW25038.1| SNF2 family helicase, putative [Neosartorya fischeri NRRL 181] Length = 1181 Score = 64.2 bits (155), Expect = 1e-08, Method: Composition-based stats. Identities = 30/162 (18%), Positives = 59/162 (36%), Gaps = 22/162 (13%) Query: 51 VHDEKIKALEV-IIEKANAAPIIVAYHFNS---------DLARLQKAFPQGRTLD---KD 97 K+ L ++E II+ Y + DL ++ TL + Sbjct: 887 TTSAKLSYLLSRVMELHTEEKIIIFYDSTNSGVWIAEGLDLLGIEYRM-YASTLSPELRT 945 Query: 98 PCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 +I + HGL++ + + F + W Q I+R Sbjct: 946 SYLNLFRESEEIRVFLMDLHQASHGLHI-ANASRVFFVNPIWQPNVESQAIKR-----AH 999 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 + G R V+V L+ ++T+++ +L+R K+ + + A K Sbjct: 1000 RIGQTRPVYVETLVLKDTLEDKMLKR--RKAMSEKEMQEAEK 1039 >gi|310800485|gb|EFQ35378.1| SNF2 family domain-containing protein [Glomerella graminicola M1.001] Length = 1015 Score = 64.2 bits (155), Expect = 1e-08, Method: Composition-based stats. Identities = 26/155 (16%), Positives = 52/155 (33%), Gaps = 18/155 (11%) Query: 49 KEVHDEKIKALE-VIIEKANAAPIIVAYHFNSDLARLQKAFPQGRT----------LDKD 97 +E + K+ AL + E IV + L + + L + Sbjct: 861 QEGYSTKMDALIRDVKEDVWTTKSIVFSCWTRTLHLVGMHLERAGVRFAMIDGNCPLSER 920 Query: 98 PCTIQEW-NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 ++ + + + +L + GLNL N + L W+ Q I R Sbjct: 921 QKILERFAKDDDLRVLIMTTGTGAFGLNLTC-ANRVFIVELQWNPSVENQAIAR-----A 974 Query: 157 RQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQ 191 + G + V V + + T++E + + K + Sbjct: 975 IRFGQDQKVLVTRYVTKATVEEEMRSQQIVKKNLA 1009 >gi|154251630|ref|YP_001412454.1| helicase domain-containing protein [Parvibaculum lavamentivorans DS-1] gi|154253990|ref|YP_001414814.1| helicase domain-containing protein [Parvibaculum lavamentivorans DS-1] gi|154155580|gb|ABS62797.1| helicase domain protein [Parvibaculum lavamentivorans DS-1] gi|154157940|gb|ABS65157.1| helicase domain protein [Parvibaculum lavamentivorans DS-1] Length = 941 Score = 64.2 bits (155), Expect = 1e-08, Method: Composition-based stats. Identities = 33/156 (21%), Positives = 61/156 (39%), Gaps = 24/156 (15%) Query: 51 VHDEKIKALEVII---EKANAAP---IIVAYHFNSDLARLQKAFP----------QGRTL 94 D K ++L +I ++ P ++V F A L G + Sbjct: 458 GTDAKAESLLELIYKLQQEEGDPALKVLVFTEFVPTQAMLADYLESRGFTVATLNGGMDM 517 Query: 95 DKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 + T+Q + G + + G GLNLQ+ +++V F + W+ +Q I R+ Sbjct: 518 EARTRTLQTF-AGDARV-LISTDAGGEGLNLQF-CHVIVNFDMPWNPMRIEQRIGRVD-- 572 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 + G K V + ++T++ V Q L K + Sbjct: 573 ---RIGQKHVVRALNFVLEDTVEHRVRQVLEEKLAV 605 >gi|307106882|gb|EFN55126.1| hypothetical protein CHLNCDRAFT_57917 [Chlorella variabilis] Length = 914 Score = 64.2 bits (155), Expect = 1e-08, Method: Composition-based stats. Identities = 23/137 (16%), Positives = 46/137 (33%), Gaps = 21/137 (15%) Query: 65 KANAAPIIVAYHFNSDLARLQKAFPQGRTL--------------DKDPCTIQEWNEGK-I 109 + +V H + + RL A + + ++ ++ + Sbjct: 754 DSGGPKFLVFAHHKTVMNRLAAALEGAKQYAPVNYVRIDGGTDQEDRRQAVRRFHSDSAV 813 Query: 110 PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYY 169 + + G GL+ +++VF L + R R + G + V VY+ Sbjct: 814 RVALLSVTAAGVGLDF-SAASVVVFAELP-----DEVAHVRQAEDRAHRQGQRHPVNVYF 867 Query: 170 LIAQNTIDELVLQRLRT 186 L A+ T D+ Q L Sbjct: 868 LCAKGTADDRRWQALNR 884 >gi|188582343|ref|YP_001925788.1| helicase domain protein [Methylobacterium populi BJ001] gi|179345841|gb|ACB81253.1| helicase domain protein [Methylobacterium populi BJ001] Length = 922 Score = 64.2 bits (155), Expect = 1e-08, Method: Composition-based stats. Identities = 29/143 (20%), Positives = 56/143 (39%), Gaps = 17/143 (11%) Query: 56 IKALEVIIEKANAAPIIVAYHFNSDLA----RLQKAFP-QGRTLDKDP------CTIQEW 104 + L + + I++ + + +++ FP QG + + + + Sbjct: 504 LDGLGTLWRQNQNEKIVIFATYLGTVDMIAREIEQTFPGQGVVVLRGGDHGAKVAAERRF 563 Query: 105 NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA 164 + P + A+ G+NLQ+ IL F L W+ + +Q I RI + G Sbjct: 564 RQKDGPRVLVCTAAGREGINLQF-ARILFNFDLPWNPMDMEQRIGRI-----HRYGQSHT 617 Query: 165 VFVYYLIAQNTIDELVLQRLRTK 187 VY L+ +TI+ + L K Sbjct: 618 AQVYNLVLSDTIEGRIFLLLDEK 640 >gi|261417435|ref|YP_003251118.1| SNF2-related protein [Fibrobacter succinogenes subsp. succinogenes S85] gi|261373891|gb|ACX76636.1| SNF2-related protein [Fibrobacter succinogenes subsp. succinogenes S85] gi|302326640|gb|ADL25841.1| SNF2/helicase/endonuclease domain protein [Fibrobacter succinogenes subsp. succinogenes S85] Length = 1045 Score = 64.2 bits (155), Expect = 1e-08, Method: Composition-based stats. Identities = 29/166 (17%), Positives = 64/166 (38%), Gaps = 30/166 (18%) Query: 52 HDEKIKALEVIIE--KANAAPIIVA---YHFNSDLARL--QKAFPQGRTLDKD------- 97 K+ A I+E +A +I+ R+ QK + ++ D Sbjct: 718 SSAKLSATMRILEDIRAKNEKVIIFTDRRDMQRMFQRILLQKFGIEASVINGDTSTSDRG 777 Query: 98 -----PCTIQEWNEGK-IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERI 151 T+ + E ++ + G GLN+ G N ++ +S W+ + Q +R+ Sbjct: 778 NKVSRQKTVDIFQEKSGFNVIIMSQLAAGVGLNV-VGANHVIHYSRHWNPAKEMQATDRV 836 Query: 152 GVTRQRQAGFKRAVFVYYLIAQ----NTIDELVLQRLRTKSTIQDL 193 + G + V+V++ +A ++ D ++ L+ K+ + Sbjct: 837 -----YRIGQTKDVYVHFPMAVCDNFDSFDVVLDALLQNKTHLASA 877 >gi|39975031|ref|XP_368906.1| hypothetical protein MGG_00338 [Magnaporthe oryzae 70-15] gi|145018771|gb|EDK03050.1| hypothetical protein MGG_00338 [Magnaporthe oryzae 70-15] Length = 1151 Score = 64.2 bits (155), Expect = 1e-08, Method: Composition-based stats. Identities = 21/100 (21%), Positives = 43/100 (43%), Gaps = 9/100 (9%) Query: 95 DKDPCTIQEWNE-GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGV 153 ++ + +NE K ++ GLN+ + + F + + + Q I R Sbjct: 940 ERRAQYVATFNETSKFRVMLMDLKQAAFGLNM-NSASRIYFVNPVLNPQVEAQAIGR--- 995 Query: 154 TRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDL 193 R+ G + V V L+ + T++EL+++R K Q+ Sbjct: 996 --ARRIGQSKDVTVETLVLRGTLEELIVER--KKKMTQEE 1031 >gi|322488767|emb|CBZ24014.1| conserved hypothetical protein [Leishmania mexicana MHOM/GT/2001/U1103] Length = 1577 Score = 64.2 bits (155), Expect = 1e-08, Method: Composition-based stats. Identities = 21/155 (13%), Positives = 54/155 (34%), Gaps = 19/155 (12%) Query: 63 IEKANAAPIIVAYHFNSDLARLQKAFPQ-----------GRTLDKDPCTIQEWNEGKIPL 111 I + +++ + S L + + + ++ C + + + Sbjct: 501 IVREQREKVVIFSQYLSHLRLMGQLLAREGISAPSLTGAASDAERCRCISELQSNDACRV 560 Query: 112 LFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLI 171 L + G G+ L + + + W+ + Q R+ + G R V +Y L Sbjct: 561 LLCSVRAGGVGIKLT-AASHCILLDVSWNPTDDVQATYRL-----YRYGQLRPVSIYRLA 614 Query: 172 AQNTIDELVLQRLRTKSTIQDLL--LNALKKETIH 204 T + +V +S +Q + ++ +++ H Sbjct: 615 TWGTSEHIVFAYALQRSWLQKKIADISDPRRQQRH 649 >gi|70993794|ref|XP_751744.1| SNF2 family helicase [Aspergillus fumigatus Af293] gi|66849378|gb|EAL89706.1| SNF2 family helicase, putative [Aspergillus fumigatus Af293] gi|159125336|gb|EDP50453.1| SNF2 family helicase, putative [Aspergillus fumigatus A1163] Length = 1180 Score = 64.2 bits (155), Expect = 1e-08, Method: Composition-based stats. Identities = 30/162 (18%), Positives = 60/162 (37%), Gaps = 22/162 (13%) Query: 51 VHDEKIKALEV-IIEKANAAPIIVAYHFNS---------DLARLQKAFPQGRTLD---KD 97 K+ L ++E + II+ Y + DL ++ TL + Sbjct: 886 TTSAKLSYLLSRVMELHSEEKIIIFYDSTNSGVWIAEGLDLLGIEYRM-YASTLSPELRT 944 Query: 98 PCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 +I + HGL++ + + F + W Q I+R Sbjct: 945 SYLNLFRESEEIRVFLMDLHQASHGLHI-ANASRVFFVNPIWQPNVESQAIKR-----AH 998 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 + G R V+V L+ ++T+++ +L+R K+ + + A K Sbjct: 999 RIGQTRPVYVETLVLKDTLEDKMLKR--RKAMSEKEMQEAEK 1038 >gi|323140664|ref|ZP_08075586.1| putative phage head-tail adaptor [Phascolarctobacterium sp. YIT 12067] gi|322414849|gb|EFY05646.1| putative phage head-tail adaptor [Phascolarctobacterium sp. YIT 12067] Length = 1109 Score = 64.2 bits (155), Expect = 1e-08, Method: Composition-based stats. Identities = 35/189 (18%), Positives = 77/189 (40%), Gaps = 30/189 (15%) Query: 16 QGENIEAFNSASKT-VKCLQLANGAVYYDEEKHWKEVHDEKIKA-LEVIIEKANAAPIIV 73 + + I+ FNS+++ V +L N YY+ EK + +K++ L +I+ + + Sbjct: 776 KEDAIKIFNSSARLKVTFSELVN--TYYNNEKILIFIESKKMQRILRTVIQDFFKIKVPI 833 Query: 74 AYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGK-IPLLFAHPASCGHGLNLQYGGNIL 132 + ++++ + +NE K +L P + G GLN+ N + Sbjct: 834 PIN-GDMRGEIRQSI------------VDTFNESKGFGVLLLSPLAAGMGLNI-ASANHV 879 Query: 133 VFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFV------YYLIAQNTIDELVLQRLRT 186 + S W+ + Q +R + G + V V + ++ ++ D + + L Sbjct: 880 IHLSRHWNPAKEDQATDR-----AYRIGQTKDVQVVIPMALHPVLRLDSFDNKLDELLEF 934 Query: 187 KSTIQDLLL 195 K + + L Sbjct: 935 KRQLSEEAL 943 >gi|308271724|emb|CBX28332.1| hypothetical protein N47_G36560 [uncultured Desulfobacterium sp.] Length = 645 Score = 64.2 bits (155), Expect = 1e-08, Method: Composition-based stats. Identities = 24/103 (23%), Positives = 44/103 (42%), Gaps = 9/103 (8%) Query: 96 KDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTR 155 KD E I G G NLQ+ +V + L W+ + +Q I RI Sbjct: 487 KDEQIRIFQEERDI---LVTTEIGGEGRNLQF-CCQMVNYDLPWNPMKIEQRIGRI---- 538 Query: 156 QRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNAL 198 + G + V +Y L +I++ +L+ L K + ++++ + Sbjct: 539 -HRIGQDKQVMIYNLCNAGSIEDHILEILDRKINMFEMVIGEV 580 >gi|254450245|ref|ZP_05063682.1| helicase domain protein [Octadecabacter antarcticus 238] gi|198264651|gb|EDY88921.1| helicase domain protein [Octadecabacter antarcticus 238] Length = 937 Score = 64.2 bits (155), Expect = 1e-08, Method: Composition-based stats. Identities = 33/180 (18%), Positives = 66/180 (36%), Gaps = 35/180 (19%) Query: 50 EVHDEKIKALEVII------EKANAAPIIVAYHFNSDLARLQKAFPQGRT---------- 93 + D K +AL I E ++V F A L + Sbjct: 457 QGTDAKAEALLEQIYKIQQEENDPELKVLVFTEFVPTQAMLAEFLESRGFSVTTLNGSMD 516 Query: 94 LDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGV 153 L+ + + G + + + G GLNLQ+ +I+V F + W+ +Q I R+ Sbjct: 517 LEARGRAQRAF-SGNVRI-LVSTDAGGEGLNLQF-CHIIVNFDMPWNPMRVEQRIGRVD- 572 Query: 154 TRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTK----------STIQDLLLNALKKETI 203 + G V + ++T++ V + L K + D ++++++ E + Sbjct: 573 ----RIGQPHIVRAINFVLEDTVEHRVREVLEAKLAVIAEEFGVDKVAD-VMDSVESEPL 627 >gi|321261139|ref|XP_003195289.1| DNA supercoiling [Cryptococcus gattii WM276] gi|317461762|gb|ADV23502.1| DNA supercoiling, putative [Cryptococcus gattii WM276] Length = 586 Score = 64.2 bits (155), Expect = 1e-08, Method: Composition-based stats. Identities = 17/87 (19%), Positives = 32/87 (36%), Gaps = 6/87 (6%) Query: 97 DPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 + + + + GLNL N ++F W + Q I+R+ Sbjct: 476 RRLALDYFETPGVRVCLMDLKLAARGLNL-VNANRVIFLGPVWSSDIQAQAIKRV----- 529 Query: 157 RQAGFKRAVFVYYLIAQNTIDELVLQR 183 + G R V L+ + T +E + +R Sbjct: 530 HRIGQTRPTLVQILVTEGTFEEDIARR 556 >gi|169608872|ref|XP_001797855.1| hypothetical protein SNOG_07521 [Phaeosphaeria nodorum SN15] gi|111063867|gb|EAT84987.1| hypothetical protein SNOG_07521 [Phaeosphaeria nodorum SN15] Length = 220 Score = 64.2 bits (155), Expect = 1e-08, Method: Composition-based stats. Identities = 24/142 (16%), Positives = 44/142 (30%), Gaps = 16/142 (11%) Query: 72 IVAYHFNSDLARLQKAFPQGRTL----------DKDPCTIQEWNE-GKIPLLFAHPASCG 120 IV + + L F K + + + +L + Sbjct: 40 IVFSFWKTTLDIAAHMFDTASLRYSRIHGQIPASKRSKILSSFESSNDVRILLITLGTGA 99 Query: 121 HGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELV 180 GLN N + W+ Q I RI + G +++V + I + T+++ V Sbjct: 100 VGLNKLKVANHIHILEPQWNPSVESQAIGRIL-----RMGQEKSVRITRYIMKGTVEKAV 154 Query: 181 LQRLRTKSTIQDLLLNALKKET 202 R K + +K E Sbjct: 155 QSRQLRKLQLASGGFGFVKDEH 176 >gi|169601474|ref|XP_001794159.1| hypothetical protein SNOG_03602 [Phaeosphaeria nodorum SN15] gi|111067687|gb|EAT88807.1| hypothetical protein SNOG_03602 [Phaeosphaeria nodorum SN15] Length = 986 Score = 63.8 bits (154), Expect = 1e-08, Method: Composition-based stats. Identities = 28/141 (19%), Positives = 49/141 (34%), Gaps = 24/141 (17%) Query: 44 EEKHWKEVHDEKIKALEVIIEKANAAP---IIVAYHFNSDLARLQKAFPQGRT------- 93 + ++ K++AL I++ + P IV + S L L+ G Sbjct: 771 DAASLEQNTSSKVEALLDILKATSQDPSNKTIVFSQWTSFLDLLEPHLTAGGLTFTRIDG 830 Query: 94 ------LDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQM 147 D ++ ++ A A C GLNL N ++ WW Q Sbjct: 831 SMTAPQRDTALDALES--NPNCTIMLASLAVCSVGLNL-VAANHVIMADSWWAPAIEDQA 887 Query: 148 IERIGVTRQRQAGFKRAVFVY 168 ++R+ + G KR V+ Sbjct: 888 VDRV-----HRLGQKRETKVF 903 >gi|326526795|dbj|BAK00786.1| predicted protein [Hordeum vulgare subsp. vulgare] Length = 949 Score = 63.8 bits (154), Expect = 1e-08, Method: Composition-based stats. Identities = 42/223 (18%), Positives = 78/223 (34%), Gaps = 53/223 (23%) Query: 1 MKQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 ++ Y KF+R A +A CL +G +D + + I +L Sbjct: 700 LESYEKFKR-----------SAIGTAVYMHPCL---SGMSEFDAADRAINLTNASIDSLV 745 Query: 61 VIIEKANA-----------------APIIVAYHF---NSDLARLQ---KAFPQGRTL--- 94 I + ++ + L RL + + G+ + Sbjct: 746 ESINVTDGVKARFFTNILALANSAGEKVLAFGQYILPMKFLERLLVKTRGWNVGKEIFVI 805 Query: 95 -------DKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQM 147 +++ T Q N +LF +CG G++L G + +V + + +Q Sbjct: 806 NGDTSQEERELATDQFNNSADAKVLFGSIRACGEGISL-VGASRVVILDVHLNPSVTRQA 864 Query: 148 IERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 I R + G ++ VFVY L+A ++ +E Q K I Sbjct: 865 IGR-----AFRPGQQKKVFVYRLVAADSQEESFHQTAFKKEVI 902 >gi|302896484|ref|XP_003047122.1| hypothetical protein NECHADRAFT_122747 [Nectria haematococca mpVI 77-13-4] gi|256728050|gb|EEU41409.1| hypothetical protein NECHADRAFT_122747 [Nectria haematococca mpVI 77-13-4] Length = 834 Score = 63.8 bits (154), Expect = 1e-08, Method: Composition-based stats. Identities = 26/153 (16%), Positives = 54/153 (35%), Gaps = 20/153 (13%) Query: 53 DEKIKAL-EVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRT----------LDKDPCTI 101 K++A+ E + I+ + L L K + + + K + Sbjct: 668 STKMRAIIEDVRVDLGTTKSIIFSCWTRTLHLLSKHLEEAKIPFHQIDGDCPIPKRQAKL 727 Query: 102 QEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 ++ + +L + GLNL N + L W+ Q I R + G Sbjct: 728 DAFDKNDDVQVLIMTTGTGAFGLNLTC-ANRIFIAELQWNPSVENQAIAR-----AIRLG 781 Query: 161 FKRAVFVYYLIAQNTID--ELVLQRLRTKSTIQ 191 + V V I ++T++ + ++ + R K + Sbjct: 782 QENEVRVTRYIIKDTVEVMQEMMAQQRHKKNLA 814 >gi|34533780|dbj|BAC86802.1| unnamed protein product [Homo sapiens] Length = 1225 Score = 63.8 bits (154), Expect = 1e-08, Method: Composition-based stats. Identities = 17/133 (12%), Positives = 40/133 (30%), Gaps = 20/133 (15%) Query: 45 EKHWKEVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQ----------KAFPQGR 92 + K+ L+ +++K +++ L L+ + G Sbjct: 1015 DGSSLVKSSGKLMLLQKMLKKLRDEGHRVLIFSQMTKMLDLLEDFLEYEGYKYERIDGGI 1074 Query: 93 TLDKDPCTIQEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 T I +N + + G G+NL + ++ + W+ Q Sbjct: 1075 TGGLRQEAIDRFNAPGAQQFCFLLSTRAGGLGINL-ATADTVIIYDSDWNPHNDIQA--- 1130 Query: 151 IGVTRQRQAGFKR 163 +R + G + Sbjct: 1131 --FSRAHRIGQTK 1141 >gi|242762226|ref|XP_002340333.1| chromodomain-helicase-DNA-binding protein, putative [Talaromyces stipitatus ATCC 10500] gi|218723529|gb|EED22946.1| chromodomain-helicase-DNA-binding protein, putative [Talaromyces stipitatus ATCC 10500] Length = 203 Score = 63.8 bits (154), Expect = 1e-08, Method: Composition-based stats. Identities = 28/159 (17%), Positives = 54/159 (33%), Gaps = 35/159 (22%) Query: 57 KALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEW----------NE 106 ++ E+ ++ F + A + + L IQ + N Sbjct: 11 DVIQEWFEEGPDTKFMIFAQFRTMTA-IFANMCKREDLAYAMGYIQNFSYFTLQIHKINR 69 Query: 107 G---------------KIPL---LFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMI 148 G KIP+ + A + G GL++ N + WW+ Q Sbjct: 70 GLGLLQPYPNPSRFPKKIPISKIMIAALKAGGTGLDIT-AANKCILVEPWWNYAVQQ--- 125 Query: 149 ERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTK 187 + + G RAV + L+A N +D+ +++ + K Sbjct: 126 --LAFCLLFRIGQTRAVEIVKLVASNAVDDHMMELQKLK 162 >gi|255954693|ref|XP_002568099.1| Pc21g10670 [Penicillium chrysogenum Wisconsin 54-1255] gi|211589810|emb|CAP95964.1| Pc21g10670 [Penicillium chrysogenum Wisconsin 54-1255] Length = 1167 Score = 63.8 bits (154), Expect = 1e-08, Method: Composition-based stats. Identities = 27/175 (15%), Positives = 64/175 (36%), Gaps = 26/175 (14%) Query: 42 YDEEKHWKE-----VHDEKIKALEVII----EKANAAPIIVAYHFNSDLARLQKAFPQ-- 90 D+ + W + K A+ + E+ + A I++ + + L+ + Sbjct: 945 IDKGQDWIAAFGRCMPGSKFDAITSQVKKWFEEDSTAKIVIFTQYVNSARLLRYLCEENH 1004 Query: 91 -------GRTLDKDPCT-IQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDL 141 GR ++ + + + ++ A + G GL+ N + LWW+ Sbjct: 1005 WSYSEITGRMANRSREIHLDRFRTNDEYKIMIASIKTGGLGLDFSV-ANKCILVDLWWNE 1063 Query: 142 EEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 Q R+ + G +R V L+ + +ID+ + + K+ +++ Sbjct: 1064 AVQDQAFFRLW-----RLGQQRDVECIMLMIKRSIDDWMDSTQKRKAKDISEVMS 1113 >gi|148667867|gb|EDL00284.1| Swi/SNF related matrix associated, actin dependent regulator of chromatin, subfamily a-like 1, isoform CRA_a [Mus musculus] Length = 922 Score = 63.8 bits (154), Expect = 1e-08, Method: Composition-based stats. Identities = 23/154 (14%), Positives = 55/154 (35%), Gaps = 18/154 (11%) Query: 45 EKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFP---------QGRT-- 93 + + ++ + +++ +V H L + K G T Sbjct: 673 NRTAEAKIPCVVEYILDLLDS-GREKFLVFAHHKVILDAVAKELERKNVQHIRIDGSTPS 731 Query: 94 LDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGV 153 D++ + + + GL +++VF L+W+ Q +R+ Sbjct: 732 ADREAQCQRFQLSKGHTVALLSITAANMGLTFST-ADLVVFAELFWNPGVLIQAEDRV-- 788 Query: 154 TRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTK 187 + G +V ++YL+A+ T D+ + ++ K Sbjct: 789 ---HRIGQTNSVSIHYLVAKGTADDYLWPLIQEK 819 >gi|20809351|gb|AAH29078.1| Smarcal1 protein [Mus musculus] Length = 910 Score = 63.8 bits (154), Expect = 1e-08, Method: Composition-based stats. Identities = 23/154 (14%), Positives = 55/154 (35%), Gaps = 18/154 (11%) Query: 45 EKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFP---------QGRT-- 93 + + ++ + +++ +V H L + K G T Sbjct: 661 NRTAEAKIPCVVEYILDLLDS-GREKFLVFAHHKVILDAVAKELERKNVQHIRIDGSTPS 719 Query: 94 LDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGV 153 D++ + + + GL +++VF L+W+ Q +R+ Sbjct: 720 ADREAQCQRFQLSKGHTVALLSITAANMGLTFST-ADLVVFAELFWNPGVLIQAEDRV-- 776 Query: 154 TRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTK 187 + G +V ++YL+A+ T D+ + ++ K Sbjct: 777 ---HRIGQTNSVSIHYLVAKGTADDYLWPLIQEK 807 >gi|74150596|dbj|BAE32320.1| unnamed protein product [Mus musculus] Length = 910 Score = 63.8 bits (154), Expect = 1e-08, Method: Composition-based stats. Identities = 23/154 (14%), Positives = 55/154 (35%), Gaps = 18/154 (11%) Query: 45 EKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFP---------QGRT-- 93 + + ++ + +++ +V H L + K G T Sbjct: 661 NRTAEAKIPCVVEYILDLLDS-GREKFLVFAHHKVILDAVAKELERKNVQHIRIDGSTPS 719 Query: 94 LDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGV 153 D++ + + + GL +++VF L+W+ Q +R+ Sbjct: 720 ADREAQCQRFQLSKGHTVALLSITAANMGLTFST-ADLVVFAELFWNPGVLIQAEDRV-- 776 Query: 154 TRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTK 187 + G +V ++YL+A+ T D+ + ++ K Sbjct: 777 ---HRIGQTNSVSIHYLVAKGTADDYLWPLIQEK 807 >gi|229577278|ref|NP_061287.2| SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1 [Mus musculus] gi|60390942|sp|Q8BJL0|SMAL1_MOUSE RecName: Full=SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1; AltName: Full=HepA-related protein; Short=mharp; AltName: Full=Sucrose nonfermenting protein 2-like 1 gi|26350593|dbj|BAC38933.1| unnamed protein product [Mus musculus] gi|148667869|gb|EDL00286.1| Swi/SNF related matrix associated, actin dependent regulator of chromatin, subfamily a-like 1, isoform CRA_c [Mus musculus] Length = 910 Score = 63.8 bits (154), Expect = 1e-08, Method: Composition-based stats. Identities = 23/154 (14%), Positives = 55/154 (35%), Gaps = 18/154 (11%) Query: 45 EKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFP---------QGRT-- 93 + + ++ + +++ +V H L + K G T Sbjct: 661 NRTAEAKIPCVVEYILDLLDS-GREKFLVFAHHKVILDAVAKELERKNVQHIRIDGSTPS 719 Query: 94 LDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGV 153 D++ + + + GL +++VF L+W+ Q +R+ Sbjct: 720 ADREAQCQRFQLSKGHTVALLSITAANMGLTFST-ADLVVFAELFWNPGVLIQAEDRV-- 776 Query: 154 TRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTK 187 + G +V ++YL+A+ T D+ + ++ K Sbjct: 777 ---HRIGQTNSVSIHYLVAKGTADDYLWPLIQEK 807 >gi|66812496|ref|XP_640427.1| DEAD-box RNA helicase [Dictyostelium discoideum AX4] gi|60468391|gb|EAL66396.1| DEAD-box RNA helicase [Dictyostelium discoideum AX4] Length = 1540 Score = 63.8 bits (154), Expect = 1e-08, Method: Composition-based stats. Identities = 31/145 (21%), Positives = 50/145 (34%), Gaps = 21/145 (14%) Query: 58 ALEVIIEKANAAPIIVAYHFNS-DLARLQKAFPQGRTLDKDPCTIQEWN------EGKIP 110 +IE++ +I D R+ P + K I + G Sbjct: 1344 MFLDLIEES----LIANDWIKDVDFCRIDGKLP----ISKREAIIDSFQAKSNNGNGGPR 1395 Query: 111 LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYL 170 L+ G GLNL+ NI+ W +Q I R+ + G R +FV Sbjct: 1396 LMLMSITCGGIGLNLER-ANIVYLMEPSWTPSIEEQAIGRVD-----RIGQTRDIFVKRF 1449 Query: 171 IAQNTIDELVLQRLRTKSTIQDLLL 195 I + TI+ +L+ K + L Sbjct: 1450 IIKKTIEVGMLKLHDAKKNNSNAFL 1474 >gi|115377394|ref|ZP_01464599.1| type III restriction enzyme, res subunit family [Stigmatella aurantiaca DW4/3-1] gi|115365605|gb|EAU64635.1| type III restriction enzyme, res subunit family [Stigmatella aurantiaca DW4/3-1] Length = 1102 Score = 63.8 bits (154), Expect = 1e-08, Method: Composition-based stats. Identities = 29/146 (19%), Positives = 50/146 (34%), Gaps = 20/146 (13%) Query: 53 DEKIKA----LEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRT----------LDKDP 98 D K+ A L I + A ++V L LQ + L + Sbjct: 582 DAKLNAFLGVLRGIWAQEREAKVLVFTESRDTLEALQAELGREGIEALGYHGDLPLVERD 641 Query: 99 CTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQ 158 + + + + P + G G N Q+ + LV + L W +Q I R+ + Sbjct: 642 RQVARFRDPEGPQVLLCTEVGGEGRNFQF-AHHLVHYDLPWSPATVEQRIGRLD-----R 695 Query: 159 AGFKRAVFVYYLIAQNTIDELVLQRL 184 G + V ++ T+ VL L Sbjct: 696 IGQSKPVEIHVFDPAGTLASDVLMLL 721 >gi|328700856|ref|XP_003241405.1| PREDICTED: transcriptional regulator ATRX homolog [Acyrthosiphon pisum] Length = 1155 Score = 63.8 bits (154), Expect = 1e-08, Method: Composition-based stats. Identities = 19/112 (16%), Positives = 41/112 (36%), Gaps = 8/112 (7%) Query: 87 AFPQGRTLDKDPCTIQEWNEGKI--PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEH 144 L + +N + + + G N+ G N ++ S W+ Sbjct: 786 RMDGKTPLSIRNQMCEAFNNPENTAKVFLLSMGTGVLGYNM-VGANRVLLLSTSWNPSND 844 Query: 145 QQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 Q I R + G ++ V+V L+A+ T++ R +K + +++ Sbjct: 845 LQAIYRCL-----RFGQQKTVYVNRLLAKGTVEPKAYYRQISKLGMASSVVD 891 >gi|147858107|emb|CAN81392.1| hypothetical protein VITISV_043256 [Vitis vinifera] Length = 210 Score = 63.8 bits (154), Expect = 1e-08, Method: Composition-based stats. Identities = 17/68 (25%), Positives = 31/68 (45%), Gaps = 5/68 (7%) Query: 136 SLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 W+ Q + R + G V +Y LI + TI+E ++Q + K ++ L++ Sbjct: 51 GSDWNPHADLQAMAR-----AHRLGQTNKVLIYRLITRGTIEERMMQMTKKKMVLEHLVV 105 Query: 196 NALKKETI 203 LK + I Sbjct: 106 GRLKAQNI 113 >gi|221505782|gb|EEE31427.1| helicase, putative [Toxoplasma gondii VEG] Length = 1345 Score = 63.8 bits (154), Expect = 1e-08, Method: Composition-based stats. Identities = 20/88 (22%), Positives = 41/88 (46%), Gaps = 7/88 (7%) Query: 111 LLFAHPASCGHGLNLQYGGNILVFF--SLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVY 168 + + G+GL L + ++ VF + + +Q I R+ + G + V V Sbjct: 548 VFLVSVRAGGYGLTLSHCASVCVFLEGGGDGNPQVERQAIARL-----YRQGQTKKVKVI 602 Query: 169 YLIAQNTIDELVLQRLRTKSTIQDLLLN 196 LI ++T++E++ R R K + +L+ Sbjct: 603 RLITRSTVEEVMYWRGRQKLKLVADVLS 630 >gi|302916821|ref|XP_003052221.1| hypothetical protein NECHADRAFT_106052 [Nectria haematococca mpVI 77-13-4] gi|256733160|gb|EEU46508.1| hypothetical protein NECHADRAFT_106052 [Nectria haematococca mpVI 77-13-4] Length = 759 Score = 63.8 bits (154), Expect = 1e-08, Method: Composition-based stats. Identities = 26/104 (25%), Positives = 47/104 (45%), Gaps = 9/104 (8%) Query: 95 DKDPCTIQEWNEGK--IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIG 152 ++ I+E+N + +L + G GLNL GG ++ WW +Q+I R Sbjct: 631 ERRTEVIREFNRQNSLMRVLLLSAVAGGTGLNL-AGGCHVILCEPWWTPGLVEQVIGR-- 687 Query: 153 VTRQRQAGFKRAVFVYYLIAQ-NTIDELVLQRLRTKSTIQDLLL 195 + ++ V VY + A ++ID L+ ++L K D + Sbjct: 688 ---ANRMPQQKQVQVYKVTAAMSSIDTLIQEKLAKKQEFIDQTV 728 >gi|257052989|ref|YP_003130822.1| helicase domain protein [Halorhabdus utahensis DSM 12940] gi|256691752|gb|ACV12089.1| helicase domain protein [Halorhabdus utahensis DSM 12940] Length = 971 Score = 63.8 bits (154), Expect = 1e-08, Method: Composition-based stats. Identities = 29/138 (21%), Positives = 57/138 (41%), Gaps = 18/138 (13%) Query: 62 IIEKANAAPIIVAYHFNSDLARLQKAFPQ------------GRTLDKDPCTIQEWNEGKI 109 ++E+ +++ + L L ++ E+N G+ Sbjct: 478 LLEEQPDEKLLLFTEYRDTLDYLLDFVQDEPWAEEILVIHGDVDKEERARIEDEFNHGQS 537 Query: 110 PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYY 169 LLFA A+ G++LQ+ +I+ + L W+ +Q I RI + G R V V+ Sbjct: 538 RLLFATDAAS-EGIDLQHSCHIMANYELPWNPNRLEQRIGRI-----HRYGQDREVKVWN 591 Query: 170 LIAQNTIDELVLQRLRTK 187 + +T + + + L+TK Sbjct: 592 FLFDDTRESEIFEMLQTK 609 >gi|126326253|ref|XP_001370015.1| PREDICTED: similar to zinc finger, RAN-binding domain containing 3, [Monodelphis domestica] Length = 959 Score = 63.8 bits (154), Expect = 1e-08, Method: Composition-based stats. Identities = 25/128 (19%), Positives = 46/128 (35%), Gaps = 17/128 (13%) Query: 70 PIIVAYHFNSDLARLQKAFPQGRTL-----------DKDPCTIQEWNEGKIPLLFAHPAS 118 +V H S L +A + + ++ Q + + + Sbjct: 91 KFLVFAHHLSMLQACTEAAIESKVRYIRIDGSVPSSERIHLVNQFQKDPDTRVAILSIQA 150 Query: 119 CGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDE 178 G GL + ++F L+WD +Q +R + G +V ++YLIA T+D Sbjct: 151 AGQGLTFTAATH-VIFAELYWDPGHIKQAEDR-----AHRIGQSSSVNIHYLIANGTLDS 204 Query: 179 LVLQRLRT 186 L+ L Sbjct: 205 LMWGMLNR 212 >gi|308498668|ref|XP_003111520.1| hypothetical protein CRE_02961 [Caenorhabditis remanei] gi|308239429|gb|EFO83381.1| hypothetical protein CRE_02961 [Caenorhabditis remanei] Length = 679 Score = 63.8 bits (154), Expect = 1e-08, Method: Composition-based stats. Identities = 30/149 (20%), Positives = 58/149 (38%), Gaps = 22/149 (14%) Query: 58 ALEVIIE-----KANAAPIIVAYHFNSDLARLQKAFPQ---------GRTLDKDPCTI-- 101 E I+E A +++ H L +Q + G+T + Sbjct: 470 VCEHILENYFYPDAPPRKVLIFAHHQIVLDTIQVEVNKRKLGSIRIDGKTPSHQRTALCD 529 Query: 102 QEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGF 161 N+ I + + G G+ L +++VF + ++ Q +R + G Sbjct: 530 SFQNDDSIRVAVLSITAAGVGITLT-AASVVVFAEIHFNPGYLVQAEDR-----AHRVGQ 583 Query: 162 KRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 K +VFV YLIA+ T D+++ ++ K + Sbjct: 584 KDSVFVQYLIAKKTADDVMWNMVQQKLDV 612 >gi|325089926|gb|EGC43236.1| SNF2 family helicase [Ajellomyces capsulatus H88] Length = 1211 Score = 63.8 bits (154), Expect = 1e-08, Method: Composition-based stats. Identities = 31/163 (19%), Positives = 59/163 (36%), Gaps = 20/163 (12%) Query: 49 KEVHDEKIKALEV-IIEKANAAPIIVAYHFNSDLARLQKAFP--------QGRTLDK--D 97 K+ L +IE II+ Y N+ + + TL Sbjct: 911 VATASAKLTYLLDKVIEFQEKEKIIIFYEGNNTGFYIAEGLELLGVEFRIYANTLKTKTR 970 Query: 98 PCTIQEWNEGK-IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 + +NE + + +L HGL++ + + + WD Q I+R Sbjct: 971 SEYLSLFNETETVRVLLMDLRQAAHGLHI-ACASRVFIVNPIWDPNFESQAIKR-----A 1024 Query: 157 RQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 + + V+V L+ + T+++ +L+R K L +A K Sbjct: 1025 HRISQNKPVYVETLVLKGTLEDRMLRR--RKQMSNAELRHAEK 1065 >gi|74005708|ref|XP_536062.2| PREDICTED: similar to SWI/SNF-related matrix-associated actin-dependent regulator of chromatin a-like 1 [Canis familiaris] Length = 961 Score = 63.8 bits (154), Expect = 1e-08, Method: Composition-based stats. Identities = 26/143 (18%), Positives = 57/143 (39%), Gaps = 18/143 (12%) Query: 56 IKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQ---------GRTLDKDPCTI-QEWN 105 I+ + ++E +V H L+ + + + G T D + Q++ Sbjct: 721 IEYILDLLES-GREKFLVFAHHKVVLSAVTRELEKKHVPHIHIDGSTSSADREDLCQQFQ 779 Query: 106 E-GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA 164 K + + GL +++VF L+W+ Q +R+ + G + Sbjct: 780 LFEKHAVAVLSITAANMGLTFT-SADLVVFAELFWNPGVLLQAEDRV-----HRIGQSSS 833 Query: 165 VFVYYLIAQNTIDELVLQRLRTK 187 V ++YL+A+ T D+ + ++ K Sbjct: 834 VSIHYLVAKGTADDYLWPLIQEK 856 >gi|255938726|ref|XP_002560133.1| Pc14g01390 [Penicillium chrysogenum Wisconsin 54-1255] gi|211584754|emb|CAP74280.1| Pc14g01390 [Penicillium chrysogenum Wisconsin 54-1255] Length = 1487 Score = 63.8 bits (154), Expect = 2e-08, Method: Composition-based stats. Identities = 34/161 (21%), Positives = 57/161 (35%), Gaps = 23/161 (14%) Query: 39 AVYYD-EEKHWKEVHD--------EKIKALEVII----EKANAAPIIVAYHFNSDLARLQ 85 A+Y D H E+ + KI L I E A I+ + S L+ LQ Sbjct: 1226 AIYSDISSGHLNEIKNIDLEESYGSKIDTLVRHILWLREHDPGAKSIIFSQYGSFLSSLQ 1285 Query: 86 KAF---PQGRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDL 141 F T P I+++ + I H + GLNL + + + Sbjct: 1286 AVFGVLEISSTTIDSPDGIEKFKSDPAIECFLLHGKAQASGLNLTVATH-VFLCEPLINT 1344 Query: 142 EEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQ 182 Q+I R+ + G R V+ + T++E + + Sbjct: 1345 AIELQVIARV-----HRIGQHRPTTVWMYLVSGTVEESIYE 1380 >gi|312110246|ref|YP_003988562.1| SNF2-related protein [Geobacillus sp. Y4.1MC1] gi|311215347|gb|ADP73951.1| SNF2-related protein [Geobacillus sp. Y4.1MC1] Length = 555 Score = 63.8 bits (154), Expect = 2e-08, Method: Composition-based stats. Identities = 30/163 (18%), Positives = 62/163 (38%), Gaps = 21/163 (12%) Query: 44 EEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQ-----GRTLDKDP 98 EK + K + +I+ +I+ + + LQ Q Sbjct: 344 MEKINVVSTNSKAEKALQLIQSIQEK-VIIFTEYRATQLYLQWFLKQHGISSVPFRGGFK 402 Query: 99 CTIQEW------NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIG 152 ++W N ++ F + G G+NLQ+ ++ + L W+ +Q I R+ Sbjct: 403 HGKKDWMKELFKNHAQV---FIATEAGGEGINLQF-CRHVINYDLPWNPMRLEQRIGRV- 457 Query: 153 VTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 + G V++Y +NT++E +L L K + + ++ Sbjct: 458 ----HRLGQTSDVYIYNFAVKNTVEEHILTLLYEKIRLFERVV 496 >gi|219118546|ref|XP_002180043.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1] gi|217408300|gb|EEC48234.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1] Length = 140 Score = 63.8 bits (154), Expect = 2e-08, Method: Composition-based stats. Identities = 15/79 (18%), Positives = 33/79 (41%), Gaps = 7/79 (8%) Query: 111 LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVF-VYY 169 ++ + G GLNL ++ + WW+ + Q + RI + G V V Sbjct: 66 VMLMSMGAGGEGLNLVAASSVFI-ADPWWNAAKEDQCVNRI-----HRIGQLSPVVRVRK 119 Query: 170 LIAQNTIDELVLQRLRTKS 188 + ++++E +++ K Sbjct: 120 FVVTDSVEERIVELQSRKK 138 >gi|302906966|ref|XP_003049543.1| hypothetical protein NECHADRAFT_74036 [Nectria haematococca mpVI 77-13-4] gi|256730479|gb|EEU43830.1| hypothetical protein NECHADRAFT_74036 [Nectria haematococca mpVI 77-13-4] Length = 1043 Score = 63.4 bits (153), Expect = 2e-08, Method: Composition-based stats. Identities = 21/136 (15%), Positives = 46/136 (33%), Gaps = 26/136 (19%) Query: 80 DLARLQK-AFPQGRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHG--------------- 122 D AR++ F + I+ + + + + + G Sbjct: 892 DQARIRYVRFDGNVPQKQRSSVIETFKKDPSVTVFLLTLSCGAVGWAFVPCIKRHPTNVC 951 Query: 123 ---LNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 L L + W+ +Q + R+ + G +R V ++T +E Sbjct: 952 PHRLTLTE-ASRAFLIEPHWNPTLEEQALARV-----HRLGQQREVTTVRFFVKDTFEER 1005 Query: 180 VLQRLRTKSTIQDLLL 195 VL ++K ++++LL Sbjct: 1006 VLDVQKSKKKLEEVLL 1021 >gi|195015254|ref|XP_001984167.1| GH15153 [Drosophila grimshawi] gi|193897649|gb|EDV96515.1| GH15153 [Drosophila grimshawi] Length = 1285 Score = 63.4 bits (153), Expect = 2e-08, Method: Composition-based stats. Identities = 32/198 (16%), Positives = 63/198 (31%), Gaps = 29/198 (14%) Query: 5 HKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYY----DEEKHWKEVHDEKIKALE 60 K +++L SK C Q + YY KI + Sbjct: 1077 EKMKKQL----------GREGTSKCPMCRQYSPQLYYYVRKGANSSTVIGDFSTKIAYIV 1126 Query: 61 VI---IEKANAA-PIIVAYHFNSDLARLQKAFPQGRTLDK---DPCTIQEWNEGKIPL-- 111 + I+ N +++ + + L + A + I E+ + + + Sbjct: 1127 ELVLKIKSGNDQEKVLIFSQWATILNYVAIALRHNGIEHRSKFTNRDIDEFKDSALNVTC 1186 Query: 112 LFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLI 171 L A GLNL + + E Q I R+ + G + V+ I Sbjct: 1187 LLLPLARGAKGLNLIEATH-VFLIEPILTPGEELQAIGRV-----HRFGQTKPTTVHRFI 1240 Query: 172 AQNTIDELVLQRLRTKST 189 TI+E +++ +++ Sbjct: 1241 VNGTIEENIMKLIKSADD 1258 >gi|115474249|ref|NP_001060723.1| Os07g0692600 [Oryza sativa Japonica Group] gi|113612259|dbj|BAF22637.1| Os07g0692600 [Oryza sativa Japonica Group] Length = 475 Score = 63.4 bits (153), Expect = 2e-08, Method: Composition-based stats. Identities = 34/162 (20%), Positives = 64/162 (39%), Gaps = 26/162 (16%) Query: 54 EKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQKAFPQG---------------RTLDK 96 K K + ++ K++ +++ H S + L K + L Sbjct: 280 CKAKFVIDLLHKSSFRGERVLIFCHNVSPITFLVKLIEMVFGWRLGEEVLVLQGDQELPV 339 Query: 97 DPCTIQEWN---EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGV 153 + ++N GK +L A +C G++L G + LV W+ + +Q I R Sbjct: 340 RSDVMDKFNGDSAGKRKVLIASTTACAEGISLT-GASRLVMLDSEWNHSKTRQAIAR--- 395 Query: 154 TRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 + G +R V+VY L+A T +E R K+ + ++ Sbjct: 396 --AFRRGQERTVYVYLLVASGTWEEEKYNSNRRKAWMSKMVF 435 >gi|11499927|ref|NP_071172.1| ATP-dependent RNA helicase HepA, putative [Archaeoglobus fulgidus DSM 4304] gi|2650747|gb|AAB91314.1| ATP-dependent RNA helicase HepA, putative [Archaeoglobus fulgidus DSM 4304] Length = 943 Score = 63.4 bits (153), Expect = 2e-08, Method: Composition-based stats. Identities = 28/161 (17%), Positives = 64/161 (39%), Gaps = 24/161 (14%) Query: 45 EKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQ------------ 90 EK + D+K + L ++ + +I+ F + L L++ F + Sbjct: 373 EKLLERGRDKKTERLVQVVNEHMEKGNKVIIFTQFLATLDHLERTFKEIYGENSVVTVHG 432 Query: 91 -GRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIE 149 +K + W+ KI + G LNLQ N+++ + + W+ + Q + Sbjct: 433 GLTHEEKKNRIAKLWDSAKI---LIATDAAGESLNLQ-AANVVIHYEIPWNPVVYIQRVG 488 Query: 150 RIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 R+ + G ++ +++ ++ I+ VL+ + K Sbjct: 489 RV-----YRYGQEKDIYIQSMLPVFKIERRVLEVILQKVET 524 >gi|25011394|ref|NP_735789.1| hypothetical protein gbs1352 [Streptococcus agalactiae NEM316] gi|24412932|emb|CAD47011.1| Unknown [Streptococcus agalactiae NEM316] Length = 2066 Score = 63.4 bits (153), Expect = 2e-08, Method: Composition-based stats. Identities = 22/98 (22%), Positives = 39/98 (39%), Gaps = 4/98 (4%) Query: 90 QGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIE 149 T +K ++ N G++ +L A G GLN+Q + + W + QQ Sbjct: 1696 DANTDEKKNSLSRKVNSGEVRILMASTEKGGTGLNVQARMKAVHHLDVPWRPSDIQQRNG 1755 Query: 150 RIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTK 187 R+ RQ + V +Y+ I + + D + K Sbjct: 1756 RLI----RQGNQHQNVEIYHYITKGSFDNYLWATQENK 1789 >gi|240254615|ref|NP_181609.4| ATP binding / DNA binding / helicase/ nucleic acid binding / protein binding / zinc ion binding [Arabidopsis thaliana] gi|330254782|gb|AEC09876.1| RING-finger, DEAD-like helicase, PHD and SNF2 domain-containing protein [Arabidopsis thaliana] Length = 1664 Score = 63.4 bits (153), Expect = 2e-08, Method: Composition-based stats. Identities = 23/143 (16%), Positives = 48/143 (33%), Gaps = 28/143 (19%) Query: 69 APIIVAYHFNSDLARLQKAFP----------------------QGRTLDKDPCTIQEWNE 106 ++V +N L L+ AF +G + + E Sbjct: 1450 TKVLVFSSWNDVLDVLEHAFAANSITCIRMKGGRKSQTAISKFKGSEKETQKTNSHQKEE 1509 Query: 107 GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVF 166 I +L +GLNL + ++ + Q + R+ + G ++ Sbjct: 1510 KSIQVLLLLVQHGANGLNLLEAQH-VILVEPLLNPAAEAQAVGRV-----HRIGQEKPTL 1563 Query: 167 VYYLIAQNTIDELVLQRLRTKST 189 V+ + T++E + + R K+T Sbjct: 1564 VHRFLVSGTVEESIYKLNRNKNT 1586 >gi|154339395|ref|XP_001562389.1| hypothetical protein [Leishmania braziliensis MHOM/BR/75/M2904] gi|134062972|emb|CAM39420.1| conserved hypothetical protein [Leishmania braziliensis MHOM/BR/75/M2904] Length = 1878 Score = 63.4 bits (153), Expect = 2e-08, Method: Composition-based stats. Identities = 26/147 (17%), Positives = 54/147 (36%), Gaps = 23/147 (15%) Query: 54 EKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFP----------QGRTLDKDPCTIQE 103 ++ +E I ++V + + L A +L + ++ Sbjct: 1681 AFLEVVEEIWRTQPDDGVLVFSKYPAFLQLAYDAVAARGYAPHMVCGASSLAQRQRAMRA 1740 Query: 104 WNEG-------KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 + +LF S GLNL + N +VF + Q + R+ Sbjct: 1741 MQSSSGDSALSQRRILFVTSRSANAGLNLTF-ANHVVFLEPNLNPAIEHQAVGRV----- 1794 Query: 157 RQAGFKRAVFVYYLIAQNTIDELVLQR 183 + G + V V+++ A +TI+E++ +R Sbjct: 1795 HRFGQLKQVIVHHIFAPHTIEEVIYRR 1821 >gi|237838391|ref|XP_002368493.1| SNF2 family N-terminal domain-containing protein [Toxoplasma gondii ME49] gi|211966157|gb|EEB01353.1| SNF2 family N-terminal domain-containing protein [Toxoplasma gondii ME49] Length = 1345 Score = 63.4 bits (153), Expect = 2e-08, Method: Composition-based stats. Identities = 20/88 (22%), Positives = 41/88 (46%), Gaps = 7/88 (7%) Query: 111 LLFAHPASCGHGLNLQYGGNILVFF--SLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVY 168 + + G+GL L + ++ VF + + +Q I R+ + G + V V Sbjct: 548 VFLVSVRAGGYGLTLSHCASVCVFLEGGGDGNPQVERQAIARL-----YRQGQTKKVKVI 602 Query: 169 YLIAQNTIDELVLQRLRTKSTIQDLLLN 196 LI ++T++E++ R R K + +L+ Sbjct: 603 RLITRSTVEEVLYWRGRQKLKLVADVLS 630 >gi|134080265|emb|CAK97168.1| unnamed protein product [Aspergillus niger] Length = 2138 Score = 63.4 bits (153), Expect = 2e-08, Method: Composition-based stats. Identities = 41/164 (25%), Positives = 65/164 (39%), Gaps = 20/164 (12%) Query: 38 GAVYYDEEKHWKEVHDEKIKALEVIIE---KANAAPIIVAY-------HFNSDLARLQKA 87 G V DE + K+ L I+ A I + Y DLA++ K Sbjct: 1946 GGVSVDESAKY---GGSKLDKLIEILNGIPSNERALIFIQYPELIEVASKALDLAKI-KH 2001 Query: 88 FPQGRTLDKDPCTIQEWNE---GKIPLLFAHPAS-CGHGLNLQYGGNILVFFSLWWDLEE 143 T K I+++ + G+ L + GLNLQ N ++F S + Sbjct: 2002 TAILTTDRKSMQKIEQFQQTSFGEDKALILNLGGEMAAGLNLQ-SANHVIFLSPMNAETQ 2060 Query: 144 HQQMIERI-GVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRT 186 + I + R R+ G R V VY+L+A+++ID + Q R Sbjct: 2061 YDYESAMIQAIGRSRRYGQTRRVHVYHLLAKHSIDVNIFQERRH 2104 >gi|222481173|ref|YP_002567409.1| helicase domain protein [Halorubrum lacusprofundi ATCC 49239] gi|222454549|gb|ACM58812.1| helicase domain protein [Halorubrum lacusprofundi ATCC 49239] Length = 988 Score = 63.4 bits (153), Expect = 2e-08, Method: Composition-based stats. Identities = 30/151 (19%), Positives = 61/151 (40%), Gaps = 21/151 (13%) Query: 52 HDEKIKALEVIIEK----ANAAPIIVAYHFNSDLARLQKA----FPQGRTL-----DKDP 98 D K + L+ I++ I++ + L L+ + D+ Sbjct: 472 TDSKAQLLKQFIDRILSNDPDEKILIFTEYTDTLEYLRDRVFDDHDIAQVYGDLDQDRRR 531 Query: 99 CTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQ 158 ++++ + L+ A + GLNLQ+ +I+V + L W+ Q + R+ + Sbjct: 532 EEMEKFEN-EANLMLA-TDAAQEGLNLQF-AHIMVNYDLPWNPIRIDQRMGRL-----HR 583 Query: 159 AGFKRAVFVYYLIAQNTIDELVLQRLRTKST 189 G +R V + L +NT + +L L K+ Sbjct: 584 YGQERTVEIRNLFFKNTRESEILNLLVEKTN 614 >gi|209543188|ref|YP_002275417.1| helicase domain-containing protein [Gluconacetobacter diazotrophicus PAl 5] gi|209530865|gb|ACI50802.1| helicase domain protein [Gluconacetobacter diazotrophicus PAl 5] Length = 1160 Score = 63.4 bits (153), Expect = 2e-08, Method: Composition-based stats. Identities = 34/166 (20%), Positives = 56/166 (33%), Gaps = 26/166 (15%) Query: 53 DEKIKALEVIIEK--------ANAAPIIVAYHFNSDLARLQKAFP-------------QG 91 D K + LE I++ I++ L L+ G Sbjct: 476 DTKWRQLEAILDDPIMVDSHTGARRKILIFTEPKDTLEYLRDRIAARTGEPDSVVVIHGG 535 Query: 92 RTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERI 151 T + + +N + + G G+NLQ G +++V + L W+ +Q RI Sbjct: 536 ITREARRAAVAAFNSDPAVRVMIANDAAGEGVNLQRGAHLMVNYDLPWNPNRIEQRFGRI 595 Query: 152 GVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + G ++ L A NT + V QRL K L Sbjct: 596 -----HRIGQTEICHLWNLCAVNTREGEVYQRLLDKLEEARAALGG 636 >gi|115402311|ref|XP_001217232.1| predicted protein [Aspergillus terreus NIH2624] gi|114189078|gb|EAU30778.1| predicted protein [Aspergillus terreus NIH2624] Length = 752 Score = 63.4 bits (153), Expect = 2e-08, Method: Composition-based stats. Identities = 25/118 (21%), Positives = 38/118 (32%), Gaps = 17/118 (14%) Query: 72 IVAYHFNSDLARLQKAFPQ-----------GRTLDKDPCTIQEWNEGKIPLLFAHPASCG 120 IV + L L + LD+ IP+L + Sbjct: 640 IVFSAWTKTLDILCMKLEELGLNHVRIDGDVSRLDRTRRLHDFQTSPSIPILLMTYGTGA 699 Query: 121 HGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDE 178 GLNL N + W+ +Q I R + G R V V +A+ T++E Sbjct: 700 VGLNLT-AANRIHILEPQWNPSVEEQAIGR-----AVRLGQSREVTVVKYVAERTVEE 751 >gi|194336225|ref|YP_002018019.1| helicase domain protein [Pelodictyon phaeoclathratiforme BU-1] gi|194308702|gb|ACF43402.1| helicase domain protein [Pelodictyon phaeoclathratiforme BU-1] Length = 1169 Score = 63.4 bits (153), Expect = 2e-08, Method: Composition-based stats. Identities = 44/219 (20%), Positives = 75/219 (34%), Gaps = 30/219 (13%) Query: 5 HKFQRELYCDLQGENIEA--FNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVI 62 + L A Q A G V +++ W E+ +I E Sbjct: 434 ETMEETLVVQATASQTIAELDGEIFILQALEQQAKGLVASGKDRKWDELS--RILQNEPQ 491 Query: 63 IEKANAA--PIIVAYHFNSDLARLQKAFPQ-------------GRTLDKDPCTIQEWN-E 106 + A II+ L L + D + + + + Sbjct: 492 MRDAGGRMRKIIIFSEHRDTLNYLHEKIAGVLGSHDAIVVIHGAVHRDDRRKSQELFRSD 551 Query: 107 GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVF 166 +I +L A + G G+NLQ N++V + L W+ +Q RI + G + Sbjct: 552 PEIRVLVA-TDAAGEGINLQN-ANLMVNYDLPWNPNRLEQRFGRI-----HRIGQQEVCH 604 Query: 167 VYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIHV 205 ++ L+A+ T + V RL K + ALK E +V Sbjct: 605 LWNLVAKETREGDVYFRLLEKLQVVS---EALKGEVFNV 640 >gi|312219860|emb|CBX99802.1| hypothetical protein [Leptosphaeria maculans] Length = 994 Score = 63.4 bits (153), Expect = 2e-08, Method: Composition-based stats. Identities = 22/153 (14%), Positives = 46/153 (30%), Gaps = 33/153 (21%) Query: 72 IVAYHFNSDLARLQKAFPQGRTL-----------DKDPCTIQEWNEGKIPLLFAHPASCG 120 IV + L ++ A Q + + P + + + ++ Sbjct: 821 IVFSTWRMTLDIIEAALEQAQIRSVRFDGKVAQTQRQPVLNEFKSNPNVRIILLTLECGA 880 Query: 121 HG----------------LNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA 164 G L L + W+ +Q + RI + G KR Sbjct: 881 VGSVGPPASIKNANCIIRLTLT-AASRAYLMEPHWNPTVEEQALARI-----HRIGQKRE 934 Query: 165 VFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 V +++ +E V++ K + +LL+ Sbjct: 935 VTTIRFYIRDSFEERVIETQEAKKNLASVLLSG 967 >gi|157118619|ref|XP_001659181.1| snf2 histone linker phd ring helicase [Aedes aegypti] gi|108883243|gb|EAT47468.1| snf2 histone linker phd ring helicase [Aedes aegypti] Length = 1114 Score = 63.4 bits (153), Expect = 2e-08, Method: Composition-based stats. Identities = 33/175 (18%), Positives = 69/175 (39%), Gaps = 20/175 (11%) Query: 42 YDEEKHWKEVHDEKI-KALEVIIEKANAAP---IIVAYHFNSDLARLQKAFPQGRTLDKD 97 +E + KI K +E I++ + P II+ H++ L L +A Q + Sbjct: 935 SEEAITVRGNFSSKIVKIVETILQLKHQEPQVKIIIFSHWDPILTMLARALDQNDITYRA 994 Query: 98 PCT-----IQEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 + ++E+ + ++ + GLNL + + + E Q + R Sbjct: 995 KTSKFYKGVEEFKDYSKELTCMLLPLKYGSKGLNLTEATH-VFLVEPILNPGEELQAVGR 1053 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIHV 205 + + G + FV+ I Q TI+E + + ++ Q L ++ + H+ Sbjct: 1054 V-----HRIGQTKPTFVHRFIVQQTIEETIHRTIQN---DQSGLWSSKQVTVRHL 1100 >gi|322500668|emb|CBZ35745.1| unnamed protein product [Leishmania donovani BPK282A1] Length = 1581 Score = 63.4 bits (153), Expect = 2e-08, Method: Composition-based stats. Identities = 21/155 (13%), Positives = 54/155 (34%), Gaps = 19/155 (12%) Query: 63 IEKANAAPIIVAYHFNSDLARLQKAFPQ-----------GRTLDKDPCTIQEWNEGKIPL 111 I + +++ + S L + + + ++ C + + + Sbjct: 501 IVREQREKVVIFSQYLSHLRLMGQLLAREGISAPSLTGAASDAERCRCISELQSNDTCRV 560 Query: 112 LFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLI 171 L + G G+ L + + + W+ + Q R+ + G R V +Y L Sbjct: 561 LLCSVRAGGVGIKLT-AASHCILLDVSWNPTDDVQATYRL-----YRYGQLRPVNIYRLA 614 Query: 172 AQNTIDELVLQRLRTKSTIQDLL--LNALKKETIH 204 T + +V +S +Q + ++ +++ H Sbjct: 615 TWGTSEHIVFAYALQRSWLQKKIADISDPRRQQRH 649 >gi|147865787|emb|CAN81153.1| hypothetical protein VITISV_020819 [Vitis vinifera] Length = 845 Score = 63.4 bits (153), Expect = 2e-08, Method: Composition-based stats. Identities = 19/88 (21%), Positives = 41/88 (46%), Gaps = 6/88 (6%) Query: 110 PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYY 169 L + G GL L + ++F L W + Q +R+ + G +V ++Y Sbjct: 718 QFLVLSIKAGGVGLTLT-AASTVIFAELSWTPGDLIQAEDRV-----HRIGQVSSVNIHY 771 Query: 170 LIAQNTIDELVLQRLRTKSTIQDLLLNA 197 L+A +T+D+++ +++K +L+ Sbjct: 772 LLANDTVDDIIWDVVQSKLENLGQMLDG 799 >gi|195114874|ref|XP_002001992.1| GI17136 [Drosophila mojavensis] gi|193912567|gb|EDW11434.1| GI17136 [Drosophila mojavensis] Length = 733 Score = 63.4 bits (153), Expect = 2e-08, Method: Composition-based stats. Identities = 38/206 (18%), Positives = 73/206 (35%), Gaps = 33/206 (16%) Query: 8 QRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEV--------HDEKIKA- 58 ++ + + N A+K+ C +L N + + K +E+ + K KA Sbjct: 453 EKNRETVVLDPALVWTNDAAKSS-CTELNNE-LQKAKGKSREELLLRFYARTAEVKTKAV 510 Query: 59 ---LEVIIEKANAAPIIVAYHFNSDLARLQKAF--PQGRTLDKDPCTIQEWNEGKIPLL- 112 L+ +I++ I+ H + + A + + D T + G + Sbjct: 511 CAYLKTLIKE--KLKFIIFAHHRIMMDAICDALRSLKVSFIRIDGQTRSDVRAGYVDTFQ 568 Query: 113 --------FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA 164 +C G+ L I+VF L W+ Q +R + G + Sbjct: 569 KSSSCRAAVLSLKACNSGITLT-AAEIIVFAELDWNPSTLAQA-----ESRAHRIGQTKP 622 Query: 165 VFVYYLIAQNTIDELVLQRLRTKSTI 190 V YL+A T D+ + L+ K + Sbjct: 623 VVCRYLMANQTADDTIWNMLKNKQEV 648 >gi|28867259|ref|NP_789878.1| helicase/SNF2 family domain-containing protein [Pseudomonas syringae pv. tomato str. DC3000] gi|28850493|gb|AAO53573.1| helicase/SNF2 family domain protein [Pseudomonas syringae pv. tomato str. DC3000] Length = 801 Score = 63.4 bits (153), Expect = 2e-08, Method: Composition-based stats. Identities = 29/187 (15%), Positives = 67/187 (35%), Gaps = 33/187 (17%) Query: 44 EEKHWKEVHDEKIKALEV-----IIEKANAAPIIVAYHFNSDLARLQKAF------PQGR 92 +E + +D K+K I +++ + + L+ A Q Sbjct: 361 DEAAALKANDLKLKRFIDEIIGKIHTANPDEKVLIFTEYRTTQNYLRDALANHYGSDQVD 420 Query: 93 TLD------KDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 ++ + I+ + + + G G+NLQ +++V + L W+ Q Sbjct: 421 LINGSMQHAERREAIKRFE--EQGRFLISTEAGGEGINLQSKCHVMVNYDLPWNPMRLVQ 478 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTK---------STIQDLLLNA 197 I R+ + G K+ V V+ + +++D+ ++ + + Q + Sbjct: 479 RIGRL-----YRYGQKKKVVVFNIQQADSLDQNIVDLMYERIDSVVNDLAEVQQHEFNDG 533 Query: 198 LKKETIH 204 LK E + Sbjct: 534 LKDEILG 540 >gi|73748049|ref|YP_307288.1| helicase [Dehalococcoides sp. CBDB1] gi|73659765|emb|CAI82372.1| putative helicase (Snf2 family) [Dehalococcoides sp. CBDB1] Length = 1033 Score = 63.4 bits (153), Expect = 2e-08, Method: Composition-based stats. Identities = 34/158 (21%), Positives = 64/158 (40%), Gaps = 24/158 (15%) Query: 44 EEKHWKEVHDEKIKALEVIIEK---ANAAPIIVAYHFNSDLARLQKAFP---------QG 91 E+ + E D K++AL+ +I I++ F LA + K G Sbjct: 508 EKANSLETFDPKLEALKKVIRDKLTLPNNKIMLFSSFRHTLAYIYKNLIAEGYRVGLVHG 567 Query: 92 RTLDKDPCTIQE------WNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQ 145 T D++ I++ +E I +L GL+ Q+ + ++ + L W+ + Sbjct: 568 GTPDEERENIRDRFQLTGQDEKVIDVLLFS-EIGCEGLDYQF-CDCMINYDLPWNPMRIE 625 Query: 146 QMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQR 183 Q I RI Q+ V ++ ++ TID + +R Sbjct: 626 QRIGRIDRNGQK----SETVAIFNMVTPGTIDAEIYER 659 >gi|325972430|ref|YP_004248621.1| SNF2-related protein [Spirochaeta sp. Buddy] gi|324027668|gb|ADY14427.1| SNF2-related protein [Spirochaeta sp. Buddy] Length = 663 Score = 63.4 bits (153), Expect = 2e-08, Method: Composition-based stats. Identities = 30/159 (18%), Positives = 64/159 (40%), Gaps = 20/159 (12%) Query: 53 DEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQKAFPQ----------GRTLDKDPCT 100 K++ + +I +IV F + L+ + G+T + Sbjct: 487 STKLRTVLNLISDLVKQGNKVIVWTIFVQTMQDLRNLIQKELGLSVELLNGQTKNFRAEI 546 Query: 101 IQEWNEGK-IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQA 159 I+E+ +P++ A+P++ ++L + ++ + ++ + Q +RI + Sbjct: 547 IEEFKHSDALPVVIANPSAVSESISLHTCCHHAIYLDMSYNAVHYIQSKDRI-----HRL 601 Query: 160 GFKRAV--FVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 G + F YY+ A NTIDE V R+ K + + Sbjct: 602 GLSPEIKTFYYYIQANNTIDERVYSRVIMKEVRMNQAIE 640 >gi|295669226|ref|XP_002795161.1| conserved hypothetical protein [Paracoccidioides brasiliensis Pb01] gi|226285095|gb|EEH40661.1| conserved hypothetical protein [Paracoccidioides brasiliensis Pb01] Length = 1282 Score = 63.4 bits (153), Expect = 2e-08, Method: Composition-based stats. Identities = 29/164 (17%), Positives = 59/164 (35%), Gaps = 21/164 (12%) Query: 49 KEVHDEKIKALEV-IIEKANAAPIIVAY-------HFNSDLARLQ--KAFPQGRTLDK-- 96 K+ L ++E II+ Y + ++ + + TL Sbjct: 920 VATASAKLTYLLDKVLEFQEKEKIIIFYEEGGNSGWYIAEALEILGVEFRIYSNTLKTSD 979 Query: 97 DPCTIQEWNEGK-IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTR 155 + +N + + +L HGL++ + + + WD Q I+R Sbjct: 980 RSAYLALFNTTELVRVLLMDLRQASHGLDIPCASRVFI-VNPIWDPNVESQAIKR----- 1033 Query: 156 QRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 + + V+V L+ +NT+++ +L R K L +A K Sbjct: 1034 AHRISQGKPVYVETLVLKNTLEDKML--QRRKQMSDAELRHAEK 1075 >gi|240169371|ref|ZP_04748030.1| SNF2 family helicase [Mycobacterium kansasii ATCC 12478] Length = 2150 Score = 63.0 bits (152), Expect = 2e-08, Method: Composition-based stats. Identities = 33/138 (23%), Positives = 55/138 (39%), Gaps = 16/138 (11%) Query: 71 IIVAYHFNSD----LARLQKAFPQGRTLD------KDPCTIQEWNEGKIPLLFAHPASCG 120 ++V L R++ R + TI + G+ P++ + Sbjct: 514 VLVFTQHTDTVTGLLRRMEAEGLTARAFHGSMSASERAATIAAFRSGEAPVM-ISTDAGA 572 Query: 121 HGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELV 180 G NLQ+ N ++ + L W+ +Q I R+ Q + VFV L A TIDE V Sbjct: 573 EGQNLQF-CNCVLNYDLPWNPMRIEQRIGRVDRLTQPR----DEVFVANLYACRTIDESV 627 Query: 181 LQRLRTKSTIQDLLLNAL 198 + L K + +LL + Sbjct: 628 YRLLAEKLRMFELLFGQV 645 >gi|302908977|ref|XP_003049971.1| hypothetical protein NECHADRAFT_106359 [Nectria haematococca mpVI 77-13-4] gi|256730908|gb|EEU44258.1| hypothetical protein NECHADRAFT_106359 [Nectria haematococca mpVI 77-13-4] Length = 1287 Score = 63.0 bits (152), Expect = 2e-08, Method: Composition-based stats. Identities = 28/185 (15%), Positives = 58/185 (31%), Gaps = 33/185 (17%) Query: 3 QYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVI 62 Y +F + ++Q ++ + +K +K L + Sbjct: 1026 IYSEFNADQLAEIQNIELDGASFTTKVDTL-----------------------VKHLLWL 1062 Query: 63 IEKANAAPIIVAYHFNSDLARLQKAFPQGRT----LDKDPCTIQEWNEGKIPLLFAHPAS 118 E A I+ + LA L+ AF + R +D + + + H + Sbjct: 1063 RESDPGAKSIIFSQYKGFLAILRNAFSRSRIGFTSIDDANGITRFKEDPSVECFLLHARA 1122 Query: 119 CGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDE 178 GLNL + + + Q I R+ + G + V+ + T++E Sbjct: 1123 HSSGLNLVNASH-VFLCEPLLNTALELQAIARVD-----RIGQQHETTVWLYLVTGTVEE 1176 Query: 179 LVLQR 183 + Sbjct: 1177 SIYNL 1181 >gi|304320770|ref|YP_003854413.1| putative ATP-dependent RNA helicase [Parvularcula bermudensis HTCC2503] gi|303299672|gb|ADM09271.1| possible ATP-dependent RNA helicase [Parvularcula bermudensis HTCC2503] Length = 1173 Score = 63.0 bits (152), Expect = 2e-08, Method: Composition-based stats. Identities = 40/197 (20%), Positives = 76/197 (38%), Gaps = 23/197 (11%) Query: 16 QGENIEAFNSASKTVKCLQL-ANGAVYYDEEKHWKEVHDEKIKALEVIIEKAN-AAPIIV 73 E+IE +T+K L+L A + ++ W ++ KI E++I+ +I+ Sbjct: 461 SAESIEQLEIEVETLKSLELQALNVLKSGKDTKWTQLD--KILDDELMIDGDGVRRKLII 518 Query: 74 AYHFNSDLARLQKAFPQ-------------GRTLDKDPCTIQEWNEGKIPLLFAHPASCG 120 L L G + ++ I + + + ++ + G Sbjct: 519 FTEAKDTLQYLADKIIGRLGKADAVDVIHGGVSREERRKVISRFMQDRELMVLVANDAAG 578 Query: 121 HGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELV 180 G+NLQ G +++V + L W+ + +Q RI + G ++ L+A NT + V Sbjct: 579 EGVNLQRG-HLMVNYDLPWNPNKIEQRFGRI-----HRIGQTEVCHLWNLVAANTREGQV 632 Query: 181 LQRLRTKSTIQDLLLNA 197 RL K L Sbjct: 633 YGRLLEKLETARSALKG 649 >gi|154341643|ref|XP_001566773.1| hypothetical protein [Leishmania braziliensis MHOM/BR/75/M2904] gi|134064098|emb|CAM40292.1| hypothetical protein, unknown function [Leishmania braziliensis MHOM/BR/75/M2904] Length = 1235 Score = 63.0 bits (152), Expect = 2e-08, Method: Composition-based stats. Identities = 19/86 (22%), Positives = 36/86 (41%), Gaps = 6/86 (6%) Query: 111 LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYL 170 + G G+NLQ +++V + Q + R+ + G + V YL Sbjct: 816 FFLISIKAGGCGINLQ-AAHMVVLVDRDYTATNEDQALARV-----YRIGQRHTVRAVYL 869 Query: 171 IAQNTIDELVLQRLRTKSTIQDLLLN 196 + +E V QR TK+ ++ ++N Sbjct: 870 ATTDPSEERVAQRAATKNKPREAIIN 895 >gi|146092861|ref|XP_001466542.1| hypothetical protein [Leishmania infantum] gi|134070905|emb|CAM69581.1| conserved hypothetical protein [Leishmania infantum JPCM5] Length = 1581 Score = 63.0 bits (152), Expect = 2e-08, Method: Composition-based stats. Identities = 21/155 (13%), Positives = 54/155 (34%), Gaps = 19/155 (12%) Query: 63 IEKANAAPIIVAYHFNSDLARLQKAFPQ-----------GRTLDKDPCTIQEWNEGKIPL 111 I + +++ + S L + + + ++ C + + + Sbjct: 501 IVREQREKVVIFSQYLSHLRLMGQLLAREGISAPSLTGAASDAERCRCISELQSNDACRV 560 Query: 112 LFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLI 171 L + G G+ L + + + W+ + Q R+ + G R V +Y L Sbjct: 561 LLCSVRAGGVGIKLT-AASHCILLDVSWNPTDDVQATYRL-----YRYGQLRPVNIYRLA 614 Query: 172 AQNTIDELVLQRLRTKSTIQDLL--LNALKKETIH 204 T + +V +S +Q + ++ +++ H Sbjct: 615 TWGTSEHIVFAYALQRSWLQKKIADISDPRRQQRH 649 >gi|171742817|ref|ZP_02918624.1| hypothetical protein BIFDEN_01932 [Bifidobacterium dentium ATCC 27678] gi|283456138|ref|YP_003360702.1| ATP-dependent DNA helicase recQ [Bifidobacterium dentium Bd1] gi|171278431|gb|EDT46092.1| hypothetical protein BIFDEN_01932 [Bifidobacterium dentium ATCC 27678] gi|283102772|gb|ADB09878.1| ATP-dependent DNA helicase recQ [Bifidobacterium dentium Bd1] Length = 1185 Score = 63.0 bits (152), Expect = 2e-08, Method: Composition-based stats. Identities = 36/184 (19%), Positives = 66/184 (35%), Gaps = 21/184 (11%) Query: 23 FNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLA 82 N + + + A+ + W ++ D + + +IV L Sbjct: 481 ANEIAWLDRLVTQASEVRASGRDTKWTQLSDILHEKVLNTGTSELPHKMIVFTEHKDTLT 540 Query: 83 RLQKAFPQ-------------GRTLDKDPCTIQEW-NEGKIPLLFAHPASCGHGLNLQYG 128 LQ G + + + N +L A + G GLNLQ Sbjct: 541 YLQGRIDTLLGRPEAVETIHGGMDRAERKRVQERFVNNPATRILVA-TDAAGEGLNLQR- 598 Query: 129 GNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKS 188 +++V + L W+ +Q RI + G KR +++ L+A++T + V +L TK Sbjct: 599 ADLMVNYDLPWNPNRIEQRFGRI-----HRIGQKRVCWLWNLVAKDTREGEVYGKLLTKI 653 Query: 189 TIQD 192 D Sbjct: 654 ETMD 657 >gi|317145894|ref|XP_003189752.1| hypothetical protein AOR_1_1066144 [Aspergillus oryzae RIB40] Length = 181 Score = 63.0 bits (152), Expect = 2e-08, Method: Composition-based stats. Identities = 24/107 (22%), Positives = 48/107 (44%), Gaps = 8/107 (7%) Query: 97 DPCTIQEWNEGKIPL-LFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTR 155 + +E+ G L G G+NLQ G ++++ +WW++ +Q R Sbjct: 69 ESAVREEFTNGTSSAPLLVTAGCGGTGINLQSG-SVIIQMEVWWNMNHERQAYARCL--- 124 Query: 156 QRQAGFKRAVFVYYLIAQNT-IDELVLQRLRTKSTIQDLLLNALKKE 201 + G + V VY L A+N+ ID ++ + K + ++ L ++ Sbjct: 125 --RQGQDKMVKVYKLFAENSNIDIMISKCQVRKDKLNSQVMKPLVRK 169 >gi|307191279|gb|EFN74926.1| SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1 [Camponotus floridanus] Length = 670 Score = 63.0 bits (152), Expect = 2e-08, Method: Composition-based stats. Identities = 28/142 (19%), Positives = 60/142 (42%), Gaps = 15/142 (10%) Query: 66 ANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPC-TIQEWNE-GKIPLLFAHPASCGHGL 123 A+ I+ A ++ +++ G+T + I ++ E + G+ Sbjct: 466 AHHQNILDAICNVAESMKIKYIRIDGKTNSEQRKHQIDQFQERDDYLAAVLSITAANAGV 525 Query: 124 NLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQR 183 L N++VF L+W+ Q +R+ + G V + YL+A+NT D+ + Sbjct: 526 TLT-AANLVVFTELFWNPGILCQAEDRV-----HRIGQNDNVIIQYLVARNTADDYIWPL 579 Query: 184 LRTKSTI-------QDLLLNAL 198 ++ K + QDL ++++ Sbjct: 580 IKNKLHVLNAAGLDQDLSIDSV 601 >gi|46126071|ref|XP_387589.1| hypothetical protein FG07413.1 [Gibberella zeae PH-1] Length = 1422 Score = 63.0 bits (152), Expect = 2e-08, Method: Composition-based stats. Identities = 29/159 (18%), Positives = 53/159 (33%), Gaps = 13/159 (8%) Query: 29 TVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAF 88 T K ++ N + + D +K L + E A IV + L L+ AF Sbjct: 1191 TDKLAEIQN---IKLDGPSFTTKVDTLVKHLMWLRESDPGAKSIVFSQYKGFLEILRNAF 1247 Query: 89 PQ---GRTLDKDPCTIQEW-NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEH 144 + G D I+ + + + H + GLNL + + + Sbjct: 1248 ARFGIGHVSIDDSGGIRRFKEDASVECFLLHARAHSSGLNLVNASH-VFLCEPLLNTALE 1306 Query: 145 QQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQR 183 Q I R+ + G V+ + T++E + Sbjct: 1307 LQAIARVD-----RIGQTHETTVWLYLVSGTVEESIYNL 1340 >gi|310824775|ref|YP_003957133.1| ATP-dependent RNA helicase [Stigmatella aurantiaca DW4/3-1] gi|309397847|gb|ADO75306.1| ATP-dependent RNA helicase [Stigmatella aurantiaca DW4/3-1] Length = 1010 Score = 63.0 bits (152), Expect = 2e-08, Method: Composition-based stats. Identities = 29/146 (19%), Positives = 50/146 (34%), Gaps = 20/146 (13%) Query: 53 DEKIKA----LEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRT----------LDKDP 98 D K+ A L I + A ++V L LQ + L + Sbjct: 490 DAKLNAFLGVLRGIWAQEREAKVLVFTESRDTLEALQAELGREGIEALGYHGDLPLVERD 549 Query: 99 CTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQ 158 + + + + P + G G N Q+ + LV + L W +Q I R+ + Sbjct: 550 RQVARFRDPEGPQVLLCTEVGGEGRNFQF-AHHLVHYDLPWSPATVEQRIGRLD-----R 603 Query: 159 AGFKRAVFVYYLIAQNTIDELVLQRL 184 G + V ++ T+ VL L Sbjct: 604 IGQSKPVEIHVFDPAGTLASDVLMLL 629 >gi|325107709|ref|YP_004268777.1| helicase [Planctomyces brasiliensis DSM 5305] gi|324967977|gb|ADY58755.1| helicase domain protein [Planctomyces brasiliensis DSM 5305] Length = 939 Score = 63.0 bits (152), Expect = 2e-08, Method: Composition-based stats. Identities = 31/158 (19%), Positives = 59/158 (37%), Gaps = 26/158 (16%) Query: 50 EVHDEKIKALEVII------EKANAAPIIVAYHFNSDLARLQKAFPQGRT---------- 93 + D + +AL ++ E ++ F L + Q Sbjct: 464 QGSDARAEALLDLLYRTQQEENDPELKFLIFTEFVPTQKMLSELLEQHGFTNVCLNGSMD 523 Query: 94 LDKDPCTIQEW-NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIG 152 L+ +E+ + +I + G GLNLQ+ +++V + L W+ +Q I R+ Sbjct: 524 LESRQRVQREFSQDARI---LISTDAGGEGLNLQF-AHVIVNYDLPWNPMRIEQRIGRVD 579 Query: 153 VTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 + G K V + +I N+++ V Q L K Sbjct: 580 -----RIGQKHRVKAFNMIFANSVELRVHQVLEEKLKT 612 >gi|297529405|ref|YP_003670680.1| helicase [Geobacillus sp. C56-T3] gi|297252657|gb|ADI26103.1| helicase domain protein [Geobacillus sp. C56-T3] Length = 554 Score = 63.0 bits (152), Expect = 2e-08, Method: Composition-based stats. Identities = 38/211 (18%), Positives = 81/211 (38%), Gaps = 28/211 (13%) Query: 5 HKFQRELYC------DLQGENIEAFNSASKTVKCL-QLANGAVYYDEEKHWKEVH----D 53 +RE + L E + + T+K + +GAV E+ ++++ + Sbjct: 292 KALRRESFAGSFSLITLLREACSSREALLLTIKNMIDKCSGAVPEPLERVLEKINAVTTN 351 Query: 54 EKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQ---------GRTLDKDPCTIQEW 104 K + +I + +I+ + + LQ Q G +QE Sbjct: 352 SKAEKALELIRSIHDK-VIIFTEYRATQLYLQWFLKQHGISSVPFRGGFRRGKKDWMQEL 410 Query: 105 NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA 164 + + A + G G+NLQ+ ++ + L W+ +Q I R+ + G Sbjct: 411 FKHHAQVFIA-TEAGGEGINLQF-CRYVINYDLPWNPMRLEQRIGRV-----HRLGQTDD 463 Query: 165 VFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 V++Y + T++E +L L K + + ++ Sbjct: 464 VYIYNFAVKQTVEEHILTLLYEKIRLFERVV 494 >gi|296213297|ref|XP_002807207.1| PREDICTED: LOW QUALITY PROTEIN: E1A-binding protein p400-like [Callithrix jacchus] Length = 3069 Score = 63.0 bits (152), Expect = 2e-08, Method: Composition-based stats. Identities = 25/172 (14%), Positives = 67/172 (38%), Gaps = 19/172 (11%) Query: 24 NSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDL 81 ++A + Q A + E + K++AL ++++K + +++ L Sbjct: 1789 HAAPYFQQLRQTATPRLLQFPELRLVQFDSGKLEALAILLQKLKSEGRRVLILSQMVLML 1848 Query: 82 ARLQK----------AFPQGRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGN 130 L+ + + ++ ++ +N + +I S G+NL + Sbjct: 1849 DILEMFLNFHYLTYVRIDENASSEQRQELMRSFNRDRRIFCAILSTHSRATGINLVE-AD 1907 Query: 131 ILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQ 182 +VF+ + + E + G + + +Y L++ N+++E +L+ Sbjct: 1908 TVVFYDNDLNPVMDAKAQEWCD-----RIGRCKDIHIYRLVSGNSVEEKLLK 1954 >gi|296205540|ref|XP_002749811.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1 [Callithrix jacchus] Length = 957 Score = 63.0 bits (152), Expect = 2e-08, Method: Composition-based stats. Identities = 25/143 (17%), Positives = 55/143 (38%), Gaps = 18/143 (12%) Query: 56 IKALEVIIEKANAAPIIVAYHFNSDLARLQKAFP---------QGRTLDKDPCTI-QEWN 105 I+ + ++E +V H L + K G T + + Q++ Sbjct: 717 IEYIMDLLESGKEK-FLVFAHHKVVLDAVMKELERKKVPHIRIDGSTSSAEREDLCQQFQ 775 Query: 106 -EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA 164 + + + GL +++VF L+W+ Q +R+ + G + Sbjct: 776 LSQRHAVAVLSITAANMGLTF-SSADLVVFAELFWNPGVLIQAEDRV-----HRIGQTSS 829 Query: 165 VFVYYLIAQNTIDELVLQRLRTK 187 V ++YL+A+ T D+ + ++ K Sbjct: 830 VGIHYLVAKGTADDYLWPLIQEK 852 >gi|307209215|gb|EFN86322.1| SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1 [Harpegnathos saltator] Length = 670 Score = 63.0 bits (152), Expect = 2e-08, Method: Composition-based stats. Identities = 25/141 (17%), Positives = 53/141 (37%), Gaps = 24/141 (17%) Query: 56 IKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPC-TIQEWNE-GKIPLLF 113 + A+ + E N +Q G+T + I ++ E Sbjct: 473 LDAICDVAESMN----------------IQYIRIDGKTTSEQRKYQIDKFQEHDDYLAAV 516 Query: 114 AHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQ 173 + G+ L +++VF L+W+ Q +R+ + G V + YL+A+ Sbjct: 517 LSITAANAGITLT-AAHLVVFTELFWNPGILCQAEDRV-----HRIGQNDNVIIQYLVAK 570 Query: 174 NTIDELVLQRLRTKSTIQDLL 194 +T D+ + ++ K I + + Sbjct: 571 DTADDYMWPLIKKKMDILNAV 591 >gi|295399151|ref|ZP_06809133.1| SNF2-related protein [Geobacillus thermoglucosidasius C56-YS93] gi|294978617|gb|EFG54213.1| SNF2-related protein [Geobacillus thermoglucosidasius C56-YS93] Length = 555 Score = 63.0 bits (152), Expect = 2e-08, Method: Composition-based stats. Identities = 30/163 (18%), Positives = 62/163 (38%), Gaps = 21/163 (12%) Query: 44 EEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQ-----GRTLDKDP 98 EK + K + +I+ +I+ + + LQ Q Sbjct: 344 MEKINAVSTNSKAEKALQLIQSIQEK-VIIFTEYRATQLYLQWFLKQHGISSVPFRGGFK 402 Query: 99 CTIQEW------NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIG 152 ++W N ++ F + G G+NLQ+ ++ + L W+ +Q I R+ Sbjct: 403 RGKKDWMKELFKNHAQV---FIATEAGGEGINLQF-CRHVINYDLPWNPMRLEQRIGRV- 457 Query: 153 VTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 + G V++Y +NT++E +L L K + + ++ Sbjct: 458 ----HRLGQTSDVYIYNFAVKNTVEEHILTLLYEKIRLFERVV 496 >gi|317033838|ref|XP_001395547.2| C-5 cytosine-specific DNA methylase [Aspergillus niger CBS 513.88] Length = 2044 Score = 63.0 bits (152), Expect = 2e-08, Method: Composition-based stats. Identities = 41/164 (25%), Positives = 65/164 (39%), Gaps = 20/164 (12%) Query: 38 GAVYYDEEKHWKEVHDEKIKALEVIIE---KANAAPIIVAY-------HFNSDLARLQKA 87 G V DE + K+ L I+ A I + Y DLA++ K Sbjct: 1849 GGVSVDESAKY---GGSKLDKLIEILNGIPSNERALIFIQYPELIEVASKALDLAKI-KH 1904 Query: 88 FPQGRTLDKDPCTIQEWNE---GKIPLLFAHPAS-CGHGLNLQYGGNILVFFSLWWDLEE 143 T K I+++ + G+ L + GLNLQ N ++F S + Sbjct: 1905 TAILTTDRKSMQKIEQFQQTSFGEDKALILNLGGEMAAGLNLQ-SANHVIFLSPMNAETQ 1963 Query: 144 HQQMIERI-GVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRT 186 + I + R R+ G R V VY+L+A+++ID + Q R Sbjct: 1964 YDYESAMIQAIGRSRRYGQTRRVHVYHLLAKHSIDVNIFQERRH 2007 >gi|138896002|ref|YP_001126455.1| Snf2/Rad54 family helicase [Geobacillus thermodenitrificans NG80-2] gi|134267515|gb|ABO67710.1| Helicase, Snf2/Rad54 family [Geobacillus thermodenitrificans NG80-2] Length = 554 Score = 63.0 bits (152), Expect = 2e-08, Method: Composition-based stats. Identities = 33/178 (18%), Positives = 65/178 (36%), Gaps = 21/178 (11%) Query: 29 TVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAF 88 KC A+ + EK + K + +I N +I+ + + LQ Sbjct: 327 IDKCEGAVPEALEHVLEKINAVTTNSKAEKALELIRSINDK-VIIFTEYRATQLYLQWFL 385 Query: 89 PQ-----GRTLDKDPCTIQEW------NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSL 137 Q ++W N ++ F + G G+NLQ+ ++ + L Sbjct: 386 KQHGISSVPFRGGFRRGKKDWMQELFKNHAQV---FIATEAGGEGINLQF-CRYVINYDL 441 Query: 138 WWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 W+ +Q I R+ + G V +Y + T++E +L L K + + ++ Sbjct: 442 PWNPMRLEQRIGRV-----HRLGQTDDVHIYNFAVKQTVEEHILTLLYEKIRLFERVV 494 >gi|170109825|ref|XP_001886119.1| predicted protein [Laccaria bicolor S238N-H82] gi|164639049|gb|EDR03323.1| predicted protein [Laccaria bicolor S238N-H82] Length = 1192 Score = 63.0 bits (152), Expect = 2e-08, Method: Composition-based stats. Identities = 30/170 (17%), Positives = 55/170 (32%), Gaps = 18/170 (10%) Query: 25 SASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARL 84 +S + K + N + Y + D ++ L I E +V F ++ Sbjct: 942 GSSASNKLNYIINEVLKYSARDKFLIFSDSELS-LAHISEALQ----LVQVKFLRFTTQI 996 Query: 85 QKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEH 144 F ++ + + GLNL + ++F W + Sbjct: 997 PAQF-------REQLVLTFETSPTYRVFLMELKHGARGLNL-ISASRVIFCEPVWQADVE 1048 Query: 145 QQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 Q I+R + G R + V L + T +E ++ R S D L Sbjct: 1049 SQAIKR-----AHRIGQTRPITVKTLAIRGTAEENMVARRNALSGSHDKL 1093 >gi|196248895|ref|ZP_03147595.1| helicase domain protein [Geobacillus sp. G11MC16] gi|196211771|gb|EDY06530.1| helicase domain protein [Geobacillus sp. G11MC16] Length = 556 Score = 63.0 bits (152), Expect = 2e-08, Method: Composition-based stats. Identities = 33/178 (18%), Positives = 65/178 (36%), Gaps = 21/178 (11%) Query: 29 TVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAF 88 KC A+ + EK + K + +I N +I+ + + LQ Sbjct: 329 IDKCEGAVPEALEHVLEKINAVTTNSKAEKALELIRSINDK-VIIFTEYRATQLYLQWFL 387 Query: 89 PQ-----GRTLDKDPCTIQEW------NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSL 137 Q ++W N ++ F + G G+NLQ+ ++ + L Sbjct: 388 KQHGISSVPFRGGFRRGKKDWMQELFKNHAQV---FIATEAGGEGINLQF-CRYVINYDL 443 Query: 138 WWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 W+ +Q I R+ + G V +Y + T++E +L L K + + ++ Sbjct: 444 PWNPMRLEQRIGRV-----HRLGQTDDVHIYNFAVKQTVEEHILTLLYEKIRLFERVV 496 >gi|56420961|ref|YP_148279.1| DNA/RNA helicase [Geobacillus kaustophilus HTA426] gi|56380803|dbj|BAD76711.1| DNA/RNA helicase (SNF2 family) [Geobacillus kaustophilus HTA426] Length = 554 Score = 63.0 bits (152), Expect = 3e-08, Method: Composition-based stats. Identities = 38/211 (18%), Positives = 81/211 (38%), Gaps = 28/211 (13%) Query: 5 HKFQRELYC------DLQGENIEAFNSASKTVKCL-QLANGAVYYDEEKHWKEVH----D 53 +RE + L E + + T+K + +GAV E+ ++++ + Sbjct: 292 KALRRESFAGSFSLITLLREACSSREALFLTIKNMIDKCSGAVPEPLERVLEKINAVTTN 351 Query: 54 EKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQ---------GRTLDKDPCTIQEW 104 K + +I + +I+ + + LQ Q G +QE Sbjct: 352 SKAEKALELIRSIHDK-VIIFTEYRATQLYLQWFLKQHGISSVPFRGGFRRGKKDWMQEL 410 Query: 105 NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA 164 + + A + G G+NLQ+ ++ + L W+ +Q I R+ + G Sbjct: 411 FKHHAQVFIA-TEAGGEGINLQF-CRYVINYDLPWNPMRLEQRIGRV-----HRLGQTDD 463 Query: 165 VFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 V++Y + T++E +L L K + + ++ Sbjct: 464 VYIYNFAVKQTVEEHILTLLYEKIRLFERVV 494 >gi|71004104|ref|XP_756718.1| hypothetical protein UM00571.1 [Ustilago maydis 521] gi|46095987|gb|EAK81220.1| hypothetical protein UM00571.1 [Ustilago maydis 521] Length = 1605 Score = 63.0 bits (152), Expect = 3e-08, Method: Composition-based stats. Identities = 20/121 (16%), Positives = 35/121 (28%), Gaps = 17/121 (14%) Query: 55 KIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTL-----------DKDPCTIQE 103 K+ + +V + L R+QK+ D+ Sbjct: 1471 KLDQSLEAYDSYEPVKSVVFSQWTKMLDRIQKSLNITGIRYTRLDGTMSRPDRTAALEAF 1530 Query: 104 WNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKR 163 + I +L + G GLNL +W+ Q ++RI + G R Sbjct: 1531 KRDAGIEVLLVSLRAGGTGLNL-VSACRAYLMDPYWNPAVENQGLDRI-----HRMGQTR 1584 Query: 164 A 164 Sbjct: 1585 P 1585 >gi|307104958|gb|EFN53209.1| hypothetical protein CHLNCDRAFT_137064 [Chlorella variabilis] Length = 2583 Score = 63.0 bits (152), Expect = 3e-08, Method: Composition-based stats. Identities = 31/170 (18%), Positives = 61/170 (35%), Gaps = 29/170 (17%) Query: 53 DEKIKALEVI---IEKANAAPIIV--AYHFNSDLARLQKA----FPQGRTL--------- 94 K+ ALE + ++V + F ++ RL P GR L Sbjct: 1883 TTKMWALEQLLRWCAAHEEKLVVVGESLEFLREVERLLDRAALRLPGGRLLRWCKIEGST 1942 Query: 95 --DKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIG 152 ++ +Q++ G+ + + HG+NL +V W+ + Q I R+ Sbjct: 1943 TDNQRTQYVQDFEGGRYQVFLLS-KAGTHGINL-VSCRRIVVLEEPWNPVYNLQAIARLF 2000 Query: 153 VTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN--ALKK 200 + G FVY + + V R K + +++ ++K+ Sbjct: 2001 -----RYGQAHGTFVYRMYFNGAVQYNVYLRNVNKVMLFKRVIDRQSVKR 2045 >gi|289523749|ref|ZP_06440603.1| type III restriction enzyme, res subunit [Anaerobaculum hydrogeniformans ATCC BAA-1850] gi|289503441|gb|EFD24605.1| type III restriction enzyme, res subunit [Anaerobaculum hydrogeniformans ATCC BAA-1850] Length = 1137 Score = 63.0 bits (152), Expect = 3e-08, Method: Composition-based stats. Identities = 30/154 (19%), Positives = 63/154 (40%), Gaps = 24/154 (15%) Query: 49 KEVHDEKIKALEVIIEKAN----AAPIIVAYHFNSDLARLQKAFP----------QGRTL 94 K+ + K+ L+ ++E +++ L L + G L Sbjct: 464 KKGVETKLNELKKVMESEKLQETETKLLIFTESKDTLEYLVEKLKSWGYSVTYIHGGMNL 523 Query: 95 DKDPCTIQEW-NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGV 153 D ++ N+ +I + + G G+NLQ+ ++V + + W+ +Q + R+ Sbjct: 524 DARIKAEADFKNQAQIMV---STEAGGEGINLQF-CWLMVNYDIPWNPNRLEQRMGRV-- 577 Query: 154 TRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTK 187 + G + V +Y L+A +T + +L RL K Sbjct: 578 ---HRYGQRNEVHIYNLVAIDTREGQILSRLFEK 608 >gi|225559892|gb|EEH08174.1| conserved hypothetical protein [Ajellomyces capsulatus G186AR] gi|225559942|gb|EEH08224.1| conserved hypothetical protein [Ajellomyces capsulatus G186AR] Length = 1209 Score = 62.6 bits (151), Expect = 3e-08, Method: Composition-based stats. Identities = 31/163 (19%), Positives = 60/163 (36%), Gaps = 20/163 (12%) Query: 49 KEVHDEKIKALEV-IIEKANAAPIIVAYHFNSDLARLQKAFP--------QGRTLDK--D 97 K+ L +IE II+ Y N+ + + TL Sbjct: 911 VATASAKLTYLLDKVIEFQEKEKIIIFYEGNNTGFYIAEGLELLGVEFRIYANTLKTKTR 970 Query: 98 PCTIQEWNEGK-IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 + +NE + + +L HGL++ + + + WD Q I+R Sbjct: 971 SEYLSLFNETETVRVLLMDLRQAAHGLHI-ACASRVFIVNPIWDPNFESQAIKR-----A 1024 Query: 157 RQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 + + V+V L+ ++T+++ +L+R K L +A K Sbjct: 1025 HRISQNKPVYVETLVLKDTLEDRMLRR--RKQMSNAELRHAEK 1065 >gi|116195246|ref|XP_001223435.1| hypothetical protein CHGG_04221 [Chaetomium globosum CBS 148.51] gi|88180134|gb|EAQ87602.1| hypothetical protein CHGG_04221 [Chaetomium globosum CBS 148.51] Length = 450 Score = 62.6 bits (151), Expect = 3e-08, Method: Composition-based stats. Identities = 31/162 (19%), Positives = 62/162 (38%), Gaps = 12/162 (7%) Query: 36 ANGAVYYDEEKHW--KEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQG 91 A AV +++ H+ H K+ AL ++K + + D A + G Sbjct: 277 AGEAVEDNDDDHYFSAGGHSTKMLALVEDVKKDLMTTKRTLHLLSKHLDRANIPYLRIDG 336 Query: 92 R-TLDKDPCTIQEW-NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIE 149 + + + ++ + +L + G GLNL N + L W+ Q I Sbjct: 337 GCPVPQRQAKLDQFSESDEKRVLVMTTGTGGFGLNLTC-ANRVFIIELQWNPGVESQAIA 395 Query: 150 RIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQ 191 R + G + V+V + ++T++E + + R K + Sbjct: 396 R-----AVRLGQENEVYVTRYVIRDTVEEEMRSQQRWKMQVA 432 >gi|156031343|ref|XP_001584996.1| hypothetical protein SS1G_14093 [Sclerotinia sclerotiorum 1980] gi|154699495|gb|EDN99233.1| hypothetical protein SS1G_14093 [Sclerotinia sclerotiorum 1980 UF-70] Length = 1098 Score = 62.6 bits (151), Expect = 3e-08, Method: Composition-based stats. Identities = 19/82 (23%), Positives = 38/82 (46%), Gaps = 6/82 (7%) Query: 118 SCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 + G GLNL + ++ W+ + Q I R + G K VY L++Q T++ Sbjct: 448 AGGLGLNL-AAASEVILLDQDWNPQVTNQAI-----CRAYRVGLKSPPIVYQLVSQGTVE 501 Query: 178 ELVLQRLRTKSTIQDLLLNALK 199 E ++ R+ K + + +++ Sbjct: 502 EQMMPRIAKKPYLLAKVTESME 523 >gi|157155470|ref|YP_001461436.1| SNF2 family helicase [Escherichia coli E24377A] gi|157077500|gb|ABV17208.1| helicase, SNF2 family [Escherichia coli E24377A] Length = 1080 Score = 62.6 bits (151), Expect = 3e-08, Method: Composition-based stats. Identities = 20/113 (17%), Positives = 48/113 (42%), Gaps = 11/113 (9%) Query: 90 QGRTLDKDPCTIQEWNE-GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMI 148 + ++ + I ++ ++ + G G+N+Q N ++ F+ W+ + Q Sbjct: 958 KSQSQNSRQRLIDDFQAQPGFGVIILSTVAVGFGVNVQK-ANHVIHFTRCWNPAKEDQAT 1016 Query: 149 ERIGVTRQRQAGFKRAVFVYYLIAQN----TIDELVLQRLRTKSTIQDLLLNA 197 +R + G + V+VYY ++ T +E + L+ + + +L A Sbjct: 1017 DR-----AYRIGQTKDVYVYYPTVKDTEITTFEETLDDLLQRRRALARDMLCA 1064 >gi|328871058|gb|EGG19429.1| SNF2-related domain-containing protein [Dictyostelium fasciculatum] Length = 830 Score = 62.6 bits (151), Expect = 3e-08, Method: Composition-based stats. Identities = 23/118 (19%), Positives = 42/118 (35%), Gaps = 14/118 (11%) Query: 52 HDEKIKALEVIIEKA-NAAPIIVAYHFNSDLAR---LQKAFPQG-------RTLDKDPCT 100 K+ + +I+ I++ ++ L L K G D Sbjct: 551 DSGKLLFVGDLIKSLPRGEKIVLVSNYTQTLDIFETLCKELSFGFLRLDGQVEADSRQFL 610 Query: 101 IQEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 I ++N+ + + + G G+NL G N +V F W+ Q +ER+ Q Sbjct: 611 ITKFNDPADQHKVFLLSAKAGGVGINL-IGANHIVLFDPDWNPAVDLQAMERVWRQGQ 667 >gi|261417712|ref|YP_003251394.1| SNF2-related protein [Geobacillus sp. Y412MC61] gi|319767479|ref|YP_004132980.1| helicase [Geobacillus sp. Y412MC52] gi|261374169|gb|ACX76912.1| SNF2-related protein [Geobacillus sp. Y412MC61] gi|317112345|gb|ADU94837.1| helicase domain protein [Geobacillus sp. Y412MC52] Length = 554 Score = 62.6 bits (151), Expect = 3e-08, Method: Composition-based stats. Identities = 38/211 (18%), Positives = 81/211 (38%), Gaps = 28/211 (13%) Query: 5 HKFQRELYC------DLQGENIEAFNSASKTVKCL-QLANGAVYYDEEKHWKEVH----D 53 +RE + L E + + T+K + +GAV E+ ++++ + Sbjct: 292 KALRRESFAGSFSLITLLREACSSREALFLTIKNMIDKCSGAVPEPLERVLEKINAVKTN 351 Query: 54 EKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQ---------GRTLDKDPCTIQEW 104 K + +I + +I+ + + LQ Q G +QE Sbjct: 352 SKAEKALELIRSIHDK-VIIFTEYRATQLYLQWFLKQHGISSVPFRGGFRRGKKDWMQEL 410 Query: 105 NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA 164 + + A + G G+NLQ+ ++ + L W+ +Q I R+ + G Sbjct: 411 FKHHAQVFIA-TEAGGEGINLQF-CRYVINYDLPWNPMRLEQRIGRV-----HRLGQTDD 463 Query: 165 VFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 V++Y + T++E +L L K + + ++ Sbjct: 464 VYIYNFAVKQTVEEHILTLLYEKIRLFERVV 494 >gi|317153368|ref|YP_004121416.1| helicase domain-containing protein [Desulfovibrio aespoeensis Aspo-2] gi|316943619|gb|ADU62670.1| helicase domain protein [Desulfovibrio aespoeensis Aspo-2] Length = 966 Score = 62.6 bits (151), Expect = 3e-08, Method: Composition-based stats. Identities = 26/156 (16%), Positives = 59/156 (37%), Gaps = 26/156 (16%) Query: 49 KEVHDEKIKALEVII------EKANAAPIIVAYHFNSDLARLQKAFPQGR---------- 92 + D K +AL I E +++ F ++ K F + R Sbjct: 477 QAGPDAKAEALIEWIYKLQAEENEPDMKVLIFTEFVPT-QQMLKEFLEARGISVVTLNGS 535 Query: 93 -TLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERI 151 +++ + K + + G GLNLQ+ ++++ + + W+ +Q I R+ Sbjct: 536 MAMEERGAAQDAF--RKSHRVLVSTDAGGEGLNLQF-AHVIINYDIPWNPMRLEQRIGRV 592 Query: 152 GVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTK 187 + G + V + +++++ V + L K Sbjct: 593 D-----RIGQPKTVQAINFVFEDSVEFRVREVLEQK 623 >gi|256378169|ref|YP_003101829.1| helicase domain protein [Actinosynnema mirum DSM 43827] gi|255922472|gb|ACU37983.1| helicase domain protein [Actinosynnema mirum DSM 43827] Length = 1131 Score = 62.6 bits (151), Expect = 3e-08, Method: Composition-based stats. Identities = 32/164 (19%), Positives = 57/164 (34%), Gaps = 23/164 (14%) Query: 43 DEEKHWKEVHDEKIKALEVII--EKANAAPIIVAYHFNSDLARLQK-------------A 87 D ++ W E+ +I +I + A +IV L L + A Sbjct: 472 DTDRKWVEL--RRILQDNDLIHPDARQARKLIVFTEHRDTLDHLDRKIGALFGAPGSVLA 529 Query: 88 FPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQM 147 G + +E+ + + G GLNLQ +++V + L W+ +Q Sbjct: 530 IHGGVNRFRRREITEEFTANPACRVLLATDAAGEGLNLQ-AAHMVVNYDLPWNPNRIEQR 588 Query: 148 IERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQ 191 R+ + G ++ L+A T + V L K Q Sbjct: 589 FGRV-----HRIGQTEVCRLWNLVAVGTREGEVFATLLRKVEEQ 627 >gi|297623430|ref|YP_003704864.1| helicase domain-containing protein [Truepera radiovictrix DSM 17093] gi|297164610|gb|ADI14321.1| helicase domain protein [Truepera radiovictrix DSM 17093] Length = 1160 Score = 62.6 bits (151), Expect = 3e-08, Method: Composition-based stats. Identities = 31/174 (17%), Positives = 67/174 (38%), Gaps = 19/174 (10%) Query: 27 SKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQK 86 + + LA ++ W+E+ ++ E++ + + +++ L LQ+ Sbjct: 461 AILKRLEALAARVKQSGTDRKWEELSRLLQESSEMLSPEGSRRKLVIFTEHRDTLLYLQE 520 Query: 87 AFPQ-------------GRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILV 133 + G ++ + + K L+ + G G+NLQ +++V Sbjct: 521 RVTRLLGRPEAVVAIHGGTGREERGKVQATFTQNKDVLVLLATDAAGEGINLQR-AHLMV 579 Query: 134 FFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTK 187 + L W+ +Q RI + G ++ L+AQ T + V +RL K Sbjct: 580 NYDLPWNPNRLEQRFGRI-----HRIGQTEVCHLWNLVAQETREGDVFKRLFDK 628 >gi|298712299|emb|CBJ26750.1| conserved unknown protein [Ectocarpus siliculosus] Length = 238 Score = 62.6 bits (151), Expect = 3e-08, Method: Composition-based stats. Identities = 15/81 (18%), Positives = 31/81 (38%), Gaps = 6/81 (7%) Query: 105 NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA 164 N+ + + G+NL N + +L +Q I R+ + G R Sbjct: 106 NDPPTTVFLLSVRAGAVGINLTQ-ANHVFLLEPMLNLALEKQAIGRV-----HRLGQTRP 159 Query: 165 VFVYYLIAQNTIDELVLQRLR 185 V V L+ ++++ +L + Sbjct: 160 VTVTKLVLADSVETRILAMRK 180 >gi|83589502|ref|YP_429511.1| helicase-like [Moorella thermoacetica ATCC 39073] gi|83572416|gb|ABC18968.1| Helicase-like protein [Moorella thermoacetica ATCC 39073] Length = 972 Score = 62.6 bits (151), Expect = 3e-08, Method: Composition-based stats. Identities = 38/177 (21%), Positives = 61/177 (34%), Gaps = 34/177 (19%) Query: 31 KCLQLANGAVYYDEEKHWKEVHDEKIKALEVII------EKANAAPIIVAYHFNSDLARL 84 KCL LA E+ +D K L II E I+ F A L Sbjct: 473 KCLALA--------ERATAGRNDIKFTRLLEIINELRIQENNPRLKFIIFTEFRETQAYL 524 Query: 85 QKAFPQ-----------GRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILV 133 ++ T ++ + E + G G+NLQ+ +IL+ Sbjct: 525 EERLTSLGYRTALINGAMSTTERIAQVERFRREAD---FLISTDAGGEGINLQF-CHILI 580 Query: 134 FFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 + L W+ +Q I RI + G + V V L +T++ V + + K Sbjct: 581 NYDLPWNPMRLEQRIGRID-----RIGQEHDVKVINLQLADTVENRVREVIENKLDT 632 >gi|53803233|ref|YP_115086.1| prophage LambdaMc01, SNF2 family helicase [Methylococcus capsulatus str. Bath] gi|53756994|gb|AAU91285.1| prophage LambdaMc01, helicase, SNF2 family [Methylococcus capsulatus str. Bath] Length = 925 Score = 62.6 bits (151), Expect = 3e-08, Method: Composition-based stats. Identities = 27/143 (18%), Positives = 51/143 (35%), Gaps = 17/143 (11%) Query: 56 IKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQ-----------GRTLDKDPCTIQEW 104 + L + + ++V + + + + Q G + + Sbjct: 506 LDGLGYLWRQNPNEKVVVFATYLGTVDLIAREIEQAYPGQGVVVLRGGDHGAKVAAERRF 565 Query: 105 NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA 164 + P + A+ G+NLQ+ IL F L W+ + +Q I RI + G Sbjct: 566 RQKDGPRVLVCTAAGREGINLQF-ARILFNFDLPWNPMDVEQRIGRI-----HRYGQNHT 619 Query: 165 VFVYYLIAQNTIDELVLQRLRTK 187 VY L+ +TI+ + L K Sbjct: 620 AQVYNLVLSDTIEGRIFLLLDEK 642 >gi|321156899|emb|CBW38888.1| putative conjugative transposon DNA recombination protein [Streptococcus pneumoniae] Length = 2081 Score = 62.6 bits (151), Expect = 3e-08, Method: Composition-based stats. Identities = 22/93 (23%), Positives = 38/93 (40%), Gaps = 4/93 (4%) Query: 95 DKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 +K ++ N G++ +L A G GLN+Q + + W + QQ RI Sbjct: 1717 EKKNSLSRKVNAGEVRVLLASTEKGGTGLNVQSKMKAVHHLDVPWRPSDIQQRNGRII-- 1774 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTK 187 RQ + V +Y+ I + + D + K Sbjct: 1775 --RQGNENKEVDIYHYITKGSFDNYLWATQENK 1805 >gi|302831485|ref|XP_002947308.1| hypothetical protein VOLCADRAFT_87560 [Volvox carteri f. nagariensis] gi|300267715|gb|EFJ51898.1| hypothetical protein VOLCADRAFT_87560 [Volvox carteri f. nagariensis] Length = 1951 Score = 62.6 bits (151), Expect = 3e-08, Method: Composition-based stats. Identities = 20/88 (22%), Positives = 35/88 (39%), Gaps = 6/88 (6%) Query: 106 EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 +GK +L G GLNL + +V D Q + R+ + G R Sbjct: 1819 QGKPRVLLLQLKQGGAGLNLTEAQH-VVLVEPQLDPAAEAQAVGRV-----HRIGQCRPT 1872 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDL 193 V+ + +T++E V + ++ DL Sbjct: 1873 HVHRFVVVHTVEEQVYKLATARARGMDL 1900 >gi|109100917|ref|XP_001086469.1| PREDICTED: SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a-like 1 isoform 2 [Macaca mulatta] gi|109100919|ref|XP_001086594.1| PREDICTED: SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a-like 1 isoform 3 [Macaca mulatta] Length = 949 Score = 62.6 bits (151), Expect = 3e-08, Method: Composition-based stats. Identities = 30/181 (16%), Positives = 67/181 (37%), Gaps = 22/181 (12%) Query: 22 AFNSASK----TVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHF 77 A ++A+K K Q A+ + + I+ + ++E +V H Sbjct: 671 ALDAAAKEMTTMDKTKQQQKDALILFFNRTAEAKIPSVIEYILDLLES-GREKFLVFAHH 729 Query: 78 NSDLARLQKAFP---------QGRTLDKDPCTI-QEWN-EGKIPLLFAHPASCGHGLNLQ 126 L + + G T + + Q++ + + + GL Sbjct: 730 KVVLDAITQELERKHVQHIRIDGSTSSAEREDLCQQFQLSERHAVAVLSITAANMGLTF- 788 Query: 127 YGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRT 186 +++VF L+W+ Q +R+ + G +V ++YL+A+ T D+ + ++ Sbjct: 789 SSADLVVFAELFWNPGVLIQAEDRV-----HRIGQTSSVGIHYLVAKGTADDYLWPLIQE 843 Query: 187 K 187 K Sbjct: 844 K 844 >gi|190194425|ref|NP_775089.1| E1A-binding protein p400 isoform 2 [Mus musculus] Length = 2999 Score = 62.6 bits (151), Expect = 3e-08, Method: Composition-based stats. Identities = 25/164 (15%), Positives = 61/164 (37%), Gaps = 19/164 (11%) Query: 32 CLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQK--- 86 QL E + K++AL ++++K + +++ L L+ Sbjct: 1719 LQQLTALRSLQFPELRLVQFDSGKLEALAILLQKLKSEGRRVLILSQMVLMLDILEMFLN 1778 Query: 87 -------AFPQGRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLW 138 + ++ ++ +N + +I S G+NL + +VF+ Sbjct: 1779 FHYLTYVRIDENANSEQRQELMRSFNRDRRIFCALLSTHSRATGINLVE-ADTVVFYDND 1837 Query: 139 WDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQ 182 + + E + G + + +Y L++ N+I+E +L+ Sbjct: 1838 LNPVMDAKAQEWCD-----RIGRCKDIHIYRLVSGNSIEEKLLK 1876 >gi|153945880|ref|NP_083613.2| E1A-binding protein p400 isoform 1 [Mus musculus] Length = 3035 Score = 62.6 bits (151), Expect = 3e-08, Method: Composition-based stats. Identities = 25/164 (15%), Positives = 61/164 (37%), Gaps = 19/164 (11%) Query: 32 CLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQK--- 86 QL E + K++AL ++++K + +++ L L+ Sbjct: 1755 LQQLTALRSLQFPELRLVQFDSGKLEALAILLQKLKSEGRRVLILSQMVLMLDILEMFLN 1814 Query: 87 -------AFPQGRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLW 138 + ++ ++ +N + +I S G+NL + +VF+ Sbjct: 1815 FHYLTYVRIDENANSEQRQELMRSFNRDRRIFCALLSTHSRATGINLVE-ADTVVFYDND 1873 Query: 139 WDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQ 182 + + E + G + + +Y L++ N+I+E +L+ Sbjct: 1874 LNPVMDAKAQEWCD-----RIGRCKDIHIYRLVSGNSIEEKLLK 1912 >gi|157821357|ref|NP_001100619.1| E1A binding protein p400 [Rattus norvegicus] gi|149063710|gb|EDM14033.1| E1A binding protein p400, isoform CRA_a [Rattus norvegicus] Length = 3034 Score = 62.6 bits (151), Expect = 3e-08, Method: Composition-based stats. Identities = 25/164 (15%), Positives = 61/164 (37%), Gaps = 19/164 (11%) Query: 32 CLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQK--- 86 QL E + K++AL ++++K + +++ L L+ Sbjct: 1757 LQQLTALRSLQFPELRLVQFDSGKLEALAILLQKLKSEGRRVLILSQMVLMLDILEMFLN 1816 Query: 87 -------AFPQGRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLW 138 + ++ ++ +N + +I S G+NL + +VF+ Sbjct: 1817 FHYLTYVRIDENANSEQRQELMRSFNRDRRIFCALLSTHSRATGINLVE-ADTVVFYDND 1875 Query: 139 WDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQ 182 + + E + G + + +Y L++ N+I+E +L+ Sbjct: 1876 LNPVMDAKAQEWCD-----RIGRCKDIHIYRLVSGNSIEEKLLK 1914 >gi|148688062|gb|EDL20009.1| E1A binding protein p400, isoform CRA_c [Mus musculus] Length = 3004 Score = 62.6 bits (151), Expect = 3e-08, Method: Composition-based stats. Identities = 25/164 (15%), Positives = 61/164 (37%), Gaps = 19/164 (11%) Query: 32 CLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQK--- 86 QL E + K++AL ++++K + +++ L L+ Sbjct: 1724 LQQLTALRSLQFPELRLVQFDSGKLEALAILLQKLKSEGRRVLILSQMVLMLDILEMFLN 1783 Query: 87 -------AFPQGRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLW 138 + ++ ++ +N + +I S G+NL + +VF+ Sbjct: 1784 FHYLTYVRIDENANSEQRQELMRSFNRDRRIFCALLSTHSRATGINLVE-ADTVVFYDND 1842 Query: 139 WDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQ 182 + + E + G + + +Y L++ N+I+E +L+ Sbjct: 1843 LNPVMDAKAQEWCD-----RIGRCKDIHIYRLVSGNSIEEKLLK 1881 >gi|148688060|gb|EDL20007.1| E1A binding protein p400, isoform CRA_a [Mus musculus] Length = 3035 Score = 62.6 bits (151), Expect = 3e-08, Method: Composition-based stats. Identities = 25/164 (15%), Positives = 61/164 (37%), Gaps = 19/164 (11%) Query: 32 CLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQK--- 86 QL E + K++AL ++++K + +++ L L+ Sbjct: 1755 LQQLTALRSLQFPELRLVQFDSGKLEALAILLQKLKSEGRRVLILSQMVLMLDILEMFLN 1814 Query: 87 -------AFPQGRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLW 138 + ++ ++ +N + +I S G+NL + +VF+ Sbjct: 1815 FHYLTYVRIDENANSEQRQELMRSFNRDRRIFCALLSTHSRATGINLVE-ADTVVFYDND 1873 Query: 139 WDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQ 182 + + E + G + + +Y L++ N+I+E +L+ Sbjct: 1874 LNPVMDAKAQEWCD-----RIGRCKDIHIYRLVSGNSIEEKLLK 1912 >gi|55976523|sp|Q8CHI8|EP400_MOUSE RecName: Full=E1A-binding protein p400; AltName: Full=Domino homolog; Short=mDomino; AltName: Full=p400 kDa SWI2/SNF2-related protein Length = 3072 Score = 62.6 bits (151), Expect = 3e-08, Method: Composition-based stats. Identities = 25/164 (15%), Positives = 61/164 (37%), Gaps = 19/164 (11%) Query: 32 CLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQK--- 86 QL E + K++AL ++++K + +++ L L+ Sbjct: 1792 LQQLTALRSLQFPELRLVQFDSGKLEALAILLQKLKSEGRRVLILSQMVLMLDILEMFLN 1851 Query: 87 -------AFPQGRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLW 138 + ++ ++ +N + +I S G+NL + +VF+ Sbjct: 1852 FHYLTYVRIDENANSEQRQELMRSFNRDRRIFCALLSTHSRATGINLVE-ADTVVFYDND 1910 Query: 139 WDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQ 182 + + E + G + + +Y L++ N+I+E +L+ Sbjct: 1911 LNPVMDAKAQEWCD-----RIGRCKDIHIYRLVSGNSIEEKLLK 1949 >gi|74217234|dbj|BAC32913.2| unnamed protein product [Mus musculus] Length = 1323 Score = 62.6 bits (151), Expect = 3e-08, Method: Composition-based stats. Identities = 25/164 (15%), Positives = 61/164 (37%), Gaps = 19/164 (11%) Query: 32 CLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQK--- 86 QL E + K++AL ++++K + +++ L L+ Sbjct: 756 LQQLTALRSLQFPELRLVQFDSGKLEALAILLQKLKSEGRRVLILSQMVLMLDILEMFLN 815 Query: 87 -------AFPQGRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLW 138 + ++ ++ +N + +I S G+NL + +VF+ Sbjct: 816 FHYLTYVRIDENANSEQRQELMRSFNRDRRIFCALLSTHSRATGINLVE-ADTVVFYDND 874 Query: 139 WDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQ 182 + + E + G + + +Y L++ N+I+E +L+ Sbjct: 875 LNPVMDAKAQEWCD-----RIGRCKDIHIYRLVSGNSIEEKLLK 913 >gi|27348239|dbj|BAC45254.1| mDomino-S [Mus musculus] Length = 2999 Score = 62.6 bits (151), Expect = 3e-08, Method: Composition-based stats. Identities = 25/164 (15%), Positives = 61/164 (37%), Gaps = 19/164 (11%) Query: 32 CLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQK--- 86 QL E + K++AL ++++K + +++ L L+ Sbjct: 1719 LQQLTALRSLQFPELRLVQFDSGKLEALAILLQKLKSEGRRVLILSQMVLMLDILEMFLN 1778 Query: 87 -------AFPQGRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLW 138 + ++ ++ +N + +I S G+NL + +VF+ Sbjct: 1779 FHYLTYVRIDENANSEQRQELMRSFNRDRRIFCALLSTHSRATGINLVE-ADTVVFYDND 1837 Query: 139 WDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQ 182 + + E + G + + +Y L++ N+I+E +L+ Sbjct: 1838 LNPVMDAKAQEWCD-----RIGRCKDIHIYRLVSGNSIEEKLLK 1876 >gi|27348237|dbj|BAC45253.1| mDomino [Mus musculus] Length = 3035 Score = 62.6 bits (151), Expect = 3e-08, Method: Composition-based stats. Identities = 25/164 (15%), Positives = 61/164 (37%), Gaps = 19/164 (11%) Query: 32 CLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQK--- 86 QL E + K++AL ++++K + +++ L L+ Sbjct: 1755 LQQLTALRSLQFPELRLVQFDSGKLEALAILLQKLKSEGRRVLILSQMVLMLDILEMFLN 1814 Query: 87 -------AFPQGRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLW 138 + ++ ++ +N + +I S G+NL + +VF+ Sbjct: 1815 FHYLTYVRIDENANSEQRQELMRSFNRDRRIFCALLSTHSRATGINLVE-ADTVVFYDND 1873 Query: 139 WDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQ 182 + + E + G + + +Y L++ N+I+E +L+ Sbjct: 1874 LNPVMDAKAQEWCD-----RIGRCKDIHIYRLVSGNSIEEKLLK 1912 >gi|261334529|emb|CBH17523.1| SNF2 DNA repair protein, putative [Trypanosoma brucei gambiense DAL972] Length = 1068 Score = 62.6 bits (151), Expect = 3e-08, Method: Composition-based stats. Identities = 29/202 (14%), Positives = 67/202 (33%), Gaps = 18/202 (8%) Query: 8 QRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKAN 67 +R C + +K + + AV E + + + + E II + N Sbjct: 619 KRRGLCQPPPGYVPMPEEGTKLYVSILIIKAAVLRGERCLFFSMSTKLLDIFEGIIAEMN 678 Query: 68 AAPIIVAYHFNS-DLAR-LQKAFPQGR-TLDKDPCTIQEWNEGK-IPLLFAHPASCGHGL 123 L+R + GR T + ++ + L + G GL Sbjct: 679 DR------WLKDGSLSRPIVFCRLDGRKTEWERSEALRSFASSTGADLFLLSTKAGGIGL 732 Query: 124 NLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQR 183 + +++ + + R + G + V+ Y L+ T + + Q+ Sbjct: 733 TITSATRVIIADG------SFNPADDTQAIGRAYRYGQTQPVYAYRLVCYQTFEHRMFQQ 786 Query: 184 LRTKSTIQDLLLN--ALKKETI 203 K + ++ +LK++++ Sbjct: 787 KLAKEWLFRTVVEEASLKRDSL 808 >gi|194396911|ref|YP_002037980.1| Tn5253 SNF2-related: helicase [Streptococcus pneumoniae G54] gi|194356578|gb|ACF55026.1| Tn5253 SNF2-related: helicase [Streptococcus pneumoniae G54] Length = 2074 Score = 62.6 bits (151), Expect = 3e-08, Method: Composition-based stats. Identities = 22/93 (23%), Positives = 38/93 (40%), Gaps = 4/93 (4%) Query: 95 DKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 +K ++ N G++ +L A G GLN+Q + + W + QQ RI Sbjct: 1710 EKKNSLSRKVNAGEVRVLLASTEKGGTGLNVQSKMKAVHHLDVPWRPSDIQQRNGRII-- 1767 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTK 187 RQ + V +Y+ I + + D + K Sbjct: 1768 --RQGNENKEVDIYHYITKGSFDNYLWATQENK 1798 >gi|71755459|ref|XP_828644.1| SNF2 DNA repair protein [Trypanosoma brucei TREU927] gi|70834030|gb|EAN79532.1| SNF2 DNA repair protein, putative [Trypanosoma brucei] Length = 1068 Score = 62.6 bits (151), Expect = 3e-08, Method: Composition-based stats. Identities = 29/202 (14%), Positives = 67/202 (33%), Gaps = 18/202 (8%) Query: 8 QRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKAN 67 +R C + +K + + AV E + + + + E II + N Sbjct: 619 KRRGLCQPPPGYVPMPEEGTKLYVSILIIKAAVLRGERCLFFSMSTKLLDIFEGIIAEMN 678 Query: 68 AAPIIVAYHFNS-DLAR-LQKAFPQGR-TLDKDPCTIQEWNEGK-IPLLFAHPASCGHGL 123 L+R + GR T + ++ + L + G GL Sbjct: 679 DR------WLKDGSLSRPIVFCRLDGRKTEWERSEALRSFASSTGADLFLLSTKAGGIGL 732 Query: 124 NLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQR 183 + +++ + + R + G + V+ Y L+ T + + Q+ Sbjct: 733 TITSATRVIIADG------SFNPADDTQAIGRAYRYGQTQPVYAYRLVCYQTFEHRMFQQ 786 Query: 184 LRTKSTIQDLLLN--ALKKETI 203 K + ++ +LK++++ Sbjct: 787 KLAKEWLFRTVVEEASLKRDSL 808 >gi|242762199|ref|XP_002340327.1| helicase, putative [Talaromyces stipitatus ATCC 10500] gi|218723523|gb|EED22940.1| helicase, putative [Talaromyces stipitatus ATCC 10500] Length = 935 Score = 62.6 bits (151), Expect = 3e-08, Method: Composition-based stats. Identities = 27/140 (19%), Positives = 51/140 (36%), Gaps = 18/140 (12%) Query: 51 VHDEKIKAL-EVIIEKANAAPIIVAYHFNSDLA---------RLQKAFPQGRT-LDKDPC 99 K+ L + + N+ I+ + L +++ A G+T L + Sbjct: 727 GFSSKMTMLVSDLRKDMNSTKSIIFSCWTRTLDLVGEHLKSAKIKYARIDGKTPLSERQK 786 Query: 100 TIQEWNE-GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQ 158 T+ ++ + P+L + GLNL N + W+ Q I R + Sbjct: 787 TLDNFDSTREKPVLVMTFGTGAFGLNL-KSVNRVFIVEPQWNPAVENQAIAR-----AIR 840 Query: 159 AGFKRAVFVYYLIAQNTIDE 178 G K V V + + +I+E Sbjct: 841 LGQKEQVLVIKYLVKGSIEE 860 >gi|328853096|gb|EGG02237.1| hypothetical protein MELLADRAFT_91569 [Melampsora larici-populina 98AG31] Length = 244 Score = 62.6 bits (151), Expect = 3e-08, Method: Composition-based stats. Identities = 16/88 (18%), Positives = 37/88 (42%), Gaps = 6/88 (6%) Query: 93 TLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIG 152 T ++ + N+ I + G GLN+ + + W+ + QQ I+ + Sbjct: 88 THERTCQLNRFKNDNNIEAFIVSIEAGGVGLNMTC-ADEVYLMDAHWNPQIVQQAIDCL- 145 Query: 153 VTRQRQAGFKRAVFVYYLIAQNTIDELV 180 + G V VY+++A ++++ + Sbjct: 146 ----HRIGQTHPVKVYHVVAGQSVEQHL 169 >gi|327474192|gb|EGF19600.1| SNF2 family protein [Streptococcus sanguinis SK408] Length = 2077 Score = 62.6 bits (151), Expect = 3e-08, Method: Composition-based stats. Identities = 22/93 (23%), Positives = 38/93 (40%), Gaps = 4/93 (4%) Query: 95 DKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 +K ++ N G++ +L A G GLN+Q + + W + QQ RI Sbjct: 1713 EKKNSLSRKVNAGEVRVLLASTEKGGTGLNVQSKMKAVHHLDVPWRPSDIQQRNGRII-- 1770 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTK 187 RQ + V +Y+ I + + D + K Sbjct: 1771 --RQGNENKEVDIYHYITKGSFDNYLWATQENK 1801 >gi|290986627|ref|XP_002676025.1| predicted protein [Naegleria gruberi] gi|284089625|gb|EFC43281.1| predicted protein [Naegleria gruberi] Length = 467 Score = 62.6 bits (151), Expect = 3e-08, Method: Composition-based stats. Identities = 41/230 (17%), Positives = 80/230 (34%), Gaps = 39/230 (16%) Query: 3 QYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVI 62 + +R++ +L + + K Q+ + D +K + + K++ + + Sbjct: 238 MIRRLKRDVLTELPPKRRSKYYLHVKEEDLKQING--IGGDSKKKFYQKDWGKLQKDKDV 295 Query: 63 IEK--------------------ANAAPIIVAYHFNSDLARLQKA----------FPQGR 92 I K ++ H + +++ G Sbjct: 296 IAKYVKTAEAKIDGIRSYLRKIIPKKEKFLIFAHHRRVMDAIEETDDDVKTYEYIRIDGE 355 Query: 93 TLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIG 152 T D++ + + G GLN + +VF L W+ Q +R Sbjct: 356 TKDREGLAHHFRSTENCLVAILSMNVAGCGLNFVP-CSTVVFAELCWNPALLNQCEDRC- 413 Query: 153 VTRQRQAGFKRA-VFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 + G K A V + YL+A+ T+D+ + L K+ I DL LN K+E Sbjct: 414 ----HRIGQKGAFVDITYLLAKKTLDDFMWDLLTKKADITDLALNGQKEE 459 >gi|150006233|ref|YP_001300977.1| putative ATP-dependent helicase [Bacteroides vulgatus ATCC 8482] gi|149934657|gb|ABR41355.1| putative ATP-dependent helicase [Bacteroides vulgatus ATCC 8482] Length = 921 Score = 62.6 bits (151), Expect = 3e-08, Method: Composition-based stats. Identities = 35/163 (21%), Positives = 60/163 (36%), Gaps = 29/163 (17%) Query: 53 DEKIKALEVIIEKANAA------PIIVAYHFNSDLARLQKAFPQGR-----------TLD 95 D K AL I I+V F A L + + + Sbjct: 453 DAKTTALIQNIYSLQDKYNDSKLKILVFTEFRKTQAYLNEQLEKAGFTTVGINGNMDLQE 512 Query: 96 KDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTR 155 + I+ N ++ + + G LN+Q+ NI+ + L W+ +Q I R+ Sbjct: 513 RQKALIKFKNNAQVMIA---TDAAGESLNMQF-CNIVFNYDLPWNPMAIEQRIGRVD--- 565 Query: 156 QRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNAL 198 + G K V Y ++ N++D V + + K D +LN L Sbjct: 566 --RIGQKHPVIAYNMLTNNSVDTRVYEIIVEKL---DAILNEL 603 >gi|289621669|emb|CBI51580.1| unnamed protein product [Sordaria macrospora] Length = 1534 Score = 62.6 bits (151), Expect = 3e-08, Method: Composition-based stats. Identities = 28/159 (17%), Positives = 56/159 (35%), Gaps = 14/159 (8%) Query: 31 KCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQ 90 K ++ N + + H+ D ++ L + + A IV + L L +AF + Sbjct: 1247 KLAEIQN--IDLENGPHYTTKVDTLLRHLLWLRQSDPGAKSIVFSQYPDFLHALAQAFER 1304 Query: 91 GRT------LDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEH 144 R + ++ I + H + GLNL + + + Sbjct: 1305 YRIGYSSFDRGAISSVVCFRDDPSIEVFLLHARAHASGLNLVNASH-VFLCEPLLNTALE 1363 Query: 145 QQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQR 183 Q I R+ + G K+ V+ I T+++ V + Sbjct: 1364 LQAIARVD-----RIGQKQETTVWLYIVDGTVEQNVYEL 1397 >gi|307110121|gb|EFN58358.1| hypothetical protein CHLNCDRAFT_142431 [Chlorella variabilis] Length = 713 Score = 62.6 bits (151), Expect = 3e-08, Method: Composition-based stats. Identities = 15/85 (17%), Positives = 32/85 (37%), Gaps = 6/85 (7%) Query: 106 EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 + ++ + + GL L + + + QQ + R+ + G +R V Sbjct: 596 DDEVRVFLLSHKAGAQGLTLVRASH-VFLLEPALEPAIEQQAVARV-----HRIGQQRPV 649 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTI 190 V L+ + +I+ VL K + Sbjct: 650 VVTRLLVKESIEHRVLAVQEAKHAL 674 >gi|307127309|ref|YP_003879340.1| SNF2 family protein [Streptococcus pneumoniae 670-6B] gi|306484371|gb|ADM91240.1| SNF2 family protein [Streptococcus pneumoniae 670-6B] Length = 2074 Score = 62.6 bits (151), Expect = 3e-08, Method: Composition-based stats. Identities = 22/93 (23%), Positives = 38/93 (40%), Gaps = 4/93 (4%) Query: 95 DKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 +K ++ N G++ +L A G GLN+Q + + W + QQ RI Sbjct: 1710 EKKNSLSRKVNAGEVRILLASTEKGGTGLNVQSKMKAVHHLDVPWRPSDIQQRNGRII-- 1767 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTK 187 RQ + V +Y+ I + + D + K Sbjct: 1768 --RQGNENKEVDIYHYITKGSFDNYLWATQENK 1798 >gi|182684275|ref|YP_001836022.1| SNF2 family protein [Streptococcus pneumoniae CGSP14] gi|182629609|gb|ACB90557.1| SNF2 family protein [Streptococcus pneumoniae CGSP14] Length = 2077 Score = 62.6 bits (151), Expect = 3e-08, Method: Composition-based stats. Identities = 22/93 (23%), Positives = 38/93 (40%), Gaps = 4/93 (4%) Query: 95 DKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 +K ++ N G++ +L A G GLN+Q + + W + QQ RI Sbjct: 1713 EKKNSLSRKVNAGEVRILLASTEKGGTGLNVQSKMKAVHHLDVPWRPSDIQQRNGRII-- 1770 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTK 187 RQ + V +Y+ I + + D + K Sbjct: 1771 --RQGNENKEVDIYHYITKGSFDNYLWATQENK 1801 >gi|322376606|ref|ZP_08051099.1| SNF2 family protein [Streptococcus sp. M334] gi|321282413|gb|EFX59420.1| SNF2 family protein [Streptococcus sp. M334] Length = 2077 Score = 62.3 bits (150), Expect = 3e-08, Method: Composition-based stats. Identities = 22/93 (23%), Positives = 38/93 (40%), Gaps = 4/93 (4%) Query: 95 DKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 +K ++ N G++ +L A G GLN+Q + + W + QQ RI Sbjct: 1713 EKKNSLSRKVNAGEVRILLASTEKGGTGLNVQSKMKAVHHLDVPWRPSDIQQRNGRII-- 1770 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTK 187 RQ + V +Y+ I + + D + K Sbjct: 1771 --RQGNENKEVDIYHYITKGSFDNYLWATQENK 1801 >gi|115443362|ref|XP_001218488.1| conserved hypothetical protein [Aspergillus terreus NIH2624] gi|114188357|gb|EAU30057.1| conserved hypothetical protein [Aspergillus terreus NIH2624] Length = 2106 Score = 62.3 bits (150), Expect = 3e-08, Method: Composition-based stats. Identities = 32/172 (18%), Positives = 61/172 (35%), Gaps = 25/172 (14%) Query: 35 LANGAVYYDEEKHWKEVHDEKIKALEVII-EKANAAPIIVAYHFNSDLARLQKAFPQGRT 93 + N + ++ K+ L I+ + ++ F + KA Sbjct: 1905 IINASTLGCDKDRSTRFGGTKMDKLVQIVGDIPTNERALLFIQFPELIDIASKALDMAGV 1964 Query: 94 LD--------KDPCTIQEWNE---GKIPLLFAHPAS-CGHGLNLQYGGNILVFFSLWWDL 141 ++++ + G +L S GLN+Q N ++F S Sbjct: 1965 KHIAISATDRTSAQKVEQFQKTSFGDNKVLILTLGSEMAAGLNVQC-ANHVIFLSPMLAQ 2023 Query: 142 EEHQ------QMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTK 187 ++ Q I R R+ G + V +Y+L+A+ TID + Q R+K Sbjct: 2024 TQYDYDSAMTQAIGRC-----RRYGQNKHVHIYHLLAKRTIDVNIFQERRSK 2070 >gi|115391319|ref|XP_001213164.1| conserved hypothetical protein [Aspergillus terreus NIH2624] gi|114194088|gb|EAU35788.1| conserved hypothetical protein [Aspergillus terreus NIH2624] Length = 1339 Score = 62.3 bits (150), Expect = 3e-08, Method: Composition-based stats. Identities = 27/179 (15%), Positives = 60/179 (33%), Gaps = 32/179 (17%) Query: 44 EEKHWKEVHDEKIKALEVIIEKANAA-PIIVAY-------HFNSDLA------RLQKAFP 89 + K+ L +++ + II+ Y L R+ Sbjct: 913 AQTKLVATASAKLTYLLDQVDQLHKEEKIIIFYDNNNSAYWIAEGLELLGIDFRIYANTL 972 Query: 90 QGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIE 149 + +E + +L HGL++ + + + W Q I+ Sbjct: 973 KPALRTAYLKLFRE--SEDVRVLLMDLRQASHGLHIANASRVFI-VNPIWQPNVESQAIK 1029 Query: 150 RIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLR----------TKSTIQDLLLNAL 198 R + G +R VFV L+ ++T+++ +L R + K + D ++++ Sbjct: 1030 R-----AHRIGQRRPVFVETLVLKDTLEDKMLTRRKAMSDMEIQRAEKDLLDDQTMSSI 1083 >gi|258564666|ref|XP_002583078.1| predicted protein [Uncinocarpus reesii 1704] gi|237908585|gb|EEP82986.1| predicted protein [Uncinocarpus reesii 1704] Length = 1355 Score = 62.3 bits (150), Expect = 3e-08, Method: Composition-based stats. Identities = 36/181 (19%), Positives = 61/181 (33%), Gaps = 33/181 (18%) Query: 39 AVYYD-EEKHWKEVHD--------EKIKALEV----IIEKANAAPIIVAYHFNSDLARLQ 85 A+Y D E + KE+ D KI L + A IV + S L L Sbjct: 1080 AIYSDIESRDLKEIKDIDIDGSFGTKIDTLARHLIWLRHHDPGAKSIVFSQYKSFLGILA 1139 Query: 86 KAFPQGRTLD---KDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDL 141 AF + + P I+ + E + H + GLNL + + + Sbjct: 1140 NAFKRFKIEFSSIDSPDGIERFKKEPSVECFLLHAKAHSSGLNLVNATH-VFLCEPLINT 1198 Query: 142 EEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQ----------RLRTKSTIQ 191 Q I R+ + G R V+ + ++++E + Q + K Q Sbjct: 1199 AIELQAIARV-----HRIGQHRETTVWMYLVSDSVEESIYQISVSRRLEHIARKRKQVSQ 1253 Query: 192 D 192 + Sbjct: 1254 N 1254 >gi|225856813|ref|YP_002738324.1| SNF2 family protein [Streptococcus pneumoniae P1031] gi|225725125|gb|ACO20977.1| SNF2 family protein [Streptococcus pneumoniae P1031] Length = 2076 Score = 62.3 bits (150), Expect = 3e-08, Method: Composition-based stats. Identities = 22/93 (23%), Positives = 38/93 (40%), Gaps = 4/93 (4%) Query: 95 DKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 +K ++ N G++ +L A G GLN+Q + + W + QQ RI Sbjct: 1712 EKKNSLSRKVNAGEVRILLASTEKGGTGLNVQSKMKAVHHLDVPWRPSDIQQRNGRII-- 1769 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTK 187 RQ + V +Y+ I + + D + K Sbjct: 1770 --RQGNENKEVDIYHYITKGSFDNYLWATQENK 1800 >gi|328852113|gb|EGG01261.1| hypothetical protein MELLADRAFT_79036 [Melampsora larici-populina 98AG31] Length = 2231 Score = 62.3 bits (150), Expect = 4e-08, Method: Composition-based stats. Identities = 37/165 (22%), Positives = 63/165 (38%), Gaps = 18/165 (10%) Query: 55 KIKALEVIIEKANAA-PIIVAYHFNSDLARLQKAFP-----QGRTLDKDPCTIQ---EWN 105 K++ L +I K + ++V F+ L ++ +A R +Q E+ Sbjct: 2063 KLERLCHLISKLRSTDRVLVFVQFSDLLDKVYEALEHRDIGVARVKGTARQQMQVMTEFQ 2122 Query: 106 E---GKIPLLFAH-PASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGF 161 E I +L H S G NL L+ ++ + E + R R+ G Sbjct: 2123 EEADPDIRVLLLHATDSSASGANLTNANYAFFVSPLFLPTQDKFKACETQAIGRLRRYGQ 2182 Query: 162 KRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL---LNALKKETI 203 + V V L+ +TID + K QD L + A +K+ I Sbjct: 2183 TKKVHVIRLLTTDTIDTQIYGHRHQK--TQDELRLEIEAARKKQI 2225 >gi|322385340|ref|ZP_08058985.1| SNF2 family protein [Streptococcus cristatus ATCC 51100] gi|321270599|gb|EFX53514.1| SNF2 family protein [Streptococcus cristatus ATCC 51100] Length = 2077 Score = 62.3 bits (150), Expect = 4e-08, Method: Composition-based stats. Identities = 22/93 (23%), Positives = 38/93 (40%), Gaps = 4/93 (4%) Query: 95 DKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 +K ++ N G++ +L A G GLN+Q + + W + QQ RI Sbjct: 1713 EKKNSLSRKVNAGEVRILLASTEKGGTGLNVQSKMKAVHHLDVPWRPSDIQQRNGRII-- 1770 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTK 187 RQ + V +Y+ I + + D + K Sbjct: 1771 --RQGNENKEVDIYHYITKGSFDNYLWATQENK 1801 >gi|319412029|emb|CBY91962.1| SNF2 family protein [Streptococcus pneumoniae] Length = 2074 Score = 62.3 bits (150), Expect = 4e-08, Method: Composition-based stats. Identities = 22/93 (23%), Positives = 38/93 (40%), Gaps = 4/93 (4%) Query: 95 DKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 +K ++ N G++ +L A G GLN+Q + + W + QQ RI Sbjct: 1710 EKKNSLSRKVNAGEVRILLASTEKGGTGLNVQSKMKAVHHLDVPWRPSDIQQRNGRII-- 1767 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTK 187 RQ + V +Y+ I + + D + K Sbjct: 1768 --RQGNENKEVDIYHYITKGSFDNYLWATQENK 1798 >gi|323455831|gb|EGB11699.1| hypothetical protein AURANDRAFT_1193 [Aureococcus anophagefferens] Length = 453 Score = 62.3 bits (150), Expect = 4e-08, Method: Composition-based stats. Identities = 28/151 (18%), Positives = 57/151 (37%), Gaps = 22/151 (14%) Query: 54 EKIKALE-VIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLL 112 + ALE ++ + HF R+ + P + N+ K+ Sbjct: 321 AVLDALEADLVRGLKGSS----AHF-----RIDGSTPPAE---RQRLVESFQNDPKVRCA 368 Query: 113 FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLI- 171 + G GL L + ++F L W Q +R + G + +V V+YL+ Sbjct: 369 LLSVTAAGVGLTLT-AASAVLFAELHWTPGVLVQAEDR-----AHRIGQRSSVNVHYLVL 422 Query: 172 --AQNTIDELVLQRLRTKSTIQDLLLNALKK 200 ++++D + + + K ++ L+ KK Sbjct: 423 KDEKDSVDMALWRSIARKVSVVGAALDGAKK 453 >gi|226290023|gb|EEH45507.1| conserved hypothetical protein [Paracoccidioides brasiliensis Pb18] Length = 1252 Score = 62.3 bits (150), Expect = 4e-08, Method: Composition-based stats. Identities = 29/164 (17%), Positives = 60/164 (36%), Gaps = 21/164 (12%) Query: 49 KEVHDEKIKALEV-IIEKANAAPIIVAY-------HFNSDLARLQ--KAFPQGRTLDK-- 96 K+ L ++E II+ Y + ++ + + TL Sbjct: 897 VATASAKLTYLLDKVLEFQEKEKIIIFYEEGGNSGWYIAEALEILGVEFRIYSNTLKTSD 956 Query: 97 DPCTIQEWNEGK-IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTR 155 + +N + + +L HGL++ + + + WD Q I+R Sbjct: 957 RSAYLALFNTTELVRVLLMDLRQASHGLDIPCASRVFI-VNPIWDPNVESQAIKR----- 1010 Query: 156 QRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 + + V+V L+ +NT+++ +L+R K L +A K Sbjct: 1011 AHRISQGKPVYVETLVLKNTLEDKMLRR--RKQMSNAELRHAEK 1052 >gi|225682607|gb|EEH20891.1| conserved hypothetical protein [Paracoccidioides brasiliensis Pb03] Length = 1275 Score = 62.3 bits (150), Expect = 4e-08, Method: Composition-based stats. Identities = 29/164 (17%), Positives = 60/164 (36%), Gaps = 21/164 (12%) Query: 49 KEVHDEKIKALEV-IIEKANAAPIIVAY-------HFNSDLARLQ--KAFPQGRTLDK-- 96 K+ L ++E II+ Y + ++ + + TL Sbjct: 920 VATASAKLTYLLDKVLEFQEKEKIIIFYEEGGNSGWYIAEALEILGVEFRIYSNTLKTSD 979 Query: 97 DPCTIQEWNEGK-IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTR 155 + +N + + +L HGL++ + + + WD Q I+R Sbjct: 980 RSAYLALFNTTELVRVLLMDLRQASHGLDIPCASRVFI-VNPIWDPNVESQAIKR----- 1033 Query: 156 QRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 + + V+V L+ +NT+++ +L+R K L +A K Sbjct: 1034 AHRISQGKPVYVETLVLKNTLEDKMLRR--RKQMSNAELRHAEK 1075 >gi|301061086|ref|ZP_07201883.1| helicase C-terminal domain protein [delta proteobacterium NaphS2] gi|300444880|gb|EFK08848.1| helicase C-terminal domain protein [delta proteobacterium NaphS2] Length = 932 Score = 62.3 bits (150), Expect = 4e-08, Method: Composition-based stats. Identities = 31/184 (16%), Positives = 65/184 (35%), Gaps = 34/184 (18%) Query: 24 NSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVII---EKANAAP---IIVAYHF 77 N ++ LQ A + + D K +AL I + P +V F Sbjct: 436 NERAEVKLLLQTATRCI--------QAGSDAKAEALLDWIYKLQAEEGDPELKFLVFTEF 487 Query: 78 NSDLARLQKAFPQGRT----------LDKDPCTIQEW-NEGKIPLLFAHPASCGHGLNLQ 126 LQ + +D+ + + E ++ + G GLNLQ Sbjct: 488 VPTQQMLQAFLSERGFPVVCLNGSMDMDERQKVQESFAQEARV---LVSTDAGGEGLNLQ 544 Query: 127 YGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRT 186 + ++++ + + W+ +Q I R+ + G V + +++++ V + L Sbjct: 545 F-CHVVINYDIPWNPMRLEQRIGRVD-----RIGQTHVVRAVNFVFEDSVEHRVREVLEE 598 Query: 187 KSTI 190 K + Sbjct: 599 KLAV 602 >gi|67539812|ref|XP_663680.1| hypothetical protein AN6076.2 [Aspergillus nidulans FGSC A4] gi|40738861|gb|EAA58051.1| hypothetical protein AN6076.2 [Aspergillus nidulans FGSC A4] gi|259479739|tpe|CBF70236.1| TPA: SNF2 family helicase, putative (AFU_orthologue; AFUA_2G09120) [Aspergillus nidulans FGSC A4] Length = 2379 Score = 62.3 bits (150), Expect = 4e-08, Method: Composition-based stats. Identities = 44/183 (24%), Positives = 73/183 (39%), Gaps = 23/183 (12%) Query: 38 GAVYYDEEKHWKEVHDEKIKALEVIIEK-ANAAPIIVAYHFNSDLARLQ---------KA 87 G D ++ K K++AL II K ++ F DL + K Sbjct: 2181 GDSNGDIDRSSKHGGT-KLEALINIITKFPVEERALLFVQF-PDLMTVASMALSSAGIKH 2238 Query: 88 FPQGRTLDKDPCTIQEWNE---GKIPLLFAHPAS-CGHGLNLQYGGNILVFFSLWWDLEE 143 T K I+++ + G +L + + GLNLQ N ++F S + + Sbjct: 2239 IIITPTDQKTSSKIEKFQKEGFGDTKVLILNLGNEMAAGLNLQC-ANHVIFLSPFLAETQ 2297 Query: 144 HQ-QMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDL-----LLNA 197 + + V R R+ G R V +Y+L+A+ TID V Q R + + LL+A Sbjct: 2298 YDYDSVMIQAVGRSRRYGQTRHVHIYHLLAKMTIDVNVFQERRGNKVLVERGGRATLLDA 2357 Query: 198 LKK 200 + Sbjct: 2358 EEA 2360 >gi|301755790|ref|XP_002913754.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1-like [Ailuropoda melanoleuca] Length = 959 Score = 62.3 bits (150), Expect = 4e-08, Method: Composition-based stats. Identities = 26/143 (18%), Positives = 56/143 (39%), Gaps = 18/143 (12%) Query: 56 IKALEVIIEKANAAPIIVAYHFNSDLARLQKAFP---------QGRTLDKDPCTI-QEWN 105 I+ + ++E +V H L+ + + G T D + Q++ Sbjct: 719 IEYILDLLES-GREKFLVFAHHKVVLSAITRELERKHVPHIRIDGSTSSADREDLCQQFQ 777 Query: 106 E-GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA 164 K + + GL +++VF L+W+ Q +R+ + G + Sbjct: 778 LFEKHAVAVLSITAANMGLTF-SSADLVVFAELFWNPGVLLQAEDRV-----HRIGQASS 831 Query: 165 VFVYYLIAQNTIDELVLQRLRTK 187 V ++YL+A+ T D+ + ++ K Sbjct: 832 VSIHYLVARGTADDYLWPLIQEK 854 >gi|281340244|gb|EFB15828.1| hypothetical protein PANDA_001570 [Ailuropoda melanoleuca] Length = 957 Score = 62.3 bits (150), Expect = 4e-08, Method: Composition-based stats. Identities = 26/143 (18%), Positives = 56/143 (39%), Gaps = 18/143 (12%) Query: 56 IKALEVIIEKANAAPIIVAYHFNSDLARLQKAFP---------QGRTLDKDPCTI-QEWN 105 I+ + ++E +V H L+ + + G T D + Q++ Sbjct: 717 IEYILDLLES-GREKFLVFAHHKVVLSAITRELERKHVPHIRIDGSTSSADREDLCQQFQ 775 Query: 106 E-GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA 164 K + + GL +++VF L+W+ Q +R+ + G + Sbjct: 776 LFEKHAVAVLSITAANMGLTF-SSADLVVFAELFWNPGVLLQAEDRV-----HRIGQASS 829 Query: 165 VFVYYLIAQNTIDELVLQRLRTK 187 V ++YL+A+ T D+ + ++ K Sbjct: 830 VSIHYLVARGTADDYLWPLIQEK 852 >gi|328875547|gb|EGG23911.1| SNF2-related domain-containing protein [Dictyostelium fasciculatum] Length = 1107 Score = 62.3 bits (150), Expect = 4e-08, Method: Composition-based stats. Identities = 25/150 (16%), Positives = 50/150 (33%), Gaps = 18/150 (12%) Query: 59 LEVIIEKANAAPIIVAYHFNSDLARLQKAFP---------QGRTLDKDPCT-IQEWNEGK 108 L+ +E + I+ H L + G T + + + Sbjct: 662 LKDKLEVFDGK-FIIFAHHLDVLDGISNVLKSRNCEYIRIDGNTNVQTRADYVNLFQTDD 720 Query: 109 -IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFV 167 I + GL L N+++F L+W Q +R + G +V + Sbjct: 721 TIRAAVLSLTAASTGLTLT-AANLVIFAELYWTPGTLFQAEDR-----AHRYGQTSSVLI 774 Query: 168 YYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 YL+ ++DE + + K + +L+ Sbjct: 775 QYLVGIGSVDESIWNMIEEKKDVLGRVLDG 804 >gi|325498704|gb|EGC96563.1| SNF2 family helicase [Escherichia fergusonii ECD227] Length = 1080 Score = 62.3 bits (150), Expect = 4e-08, Method: Composition-based stats. Identities = 20/108 (18%), Positives = 45/108 (41%), Gaps = 11/108 (10%) Query: 95 DKDPCTIQEWNE-GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGV 153 + I ++ ++ + G G+N+Q N ++ F+ W+ + Q +R Sbjct: 963 NSRQRLIDDFQAQPGFGVIILSTVAVGFGVNVQK-ANHVIHFTRCWNPAKEDQATDR--- 1018 Query: 154 TRQRQAGFKRAVFVYYLIAQN----TIDELVLQRLRTKSTIQDLLLNA 197 + G + V+VYY ++ T +E + L+ + + +L A Sbjct: 1019 --AYRIGQTKDVYVYYPTVRDSEITTFEETLDDLLQRRRALAKDMLCA 1064 >gi|313224277|emb|CBY20066.1| unnamed protein product [Oikopleura dioica] Length = 817 Score = 62.3 bits (150), Expect = 4e-08, Method: Composition-based stats. Identities = 35/143 (24%), Positives = 54/143 (37%), Gaps = 21/143 (14%) Query: 53 DEKIKALEV-IIEKANAA--PIIVAYHFNSDLARLQKAFP------------QGRTLDKD 97 D KIKA+ +IEK IIV H + + L++ R+ D+ Sbjct: 473 DAKIKAVSEYLIEKLENESEKIIVFAHHRAVIDSLEQNISPKIKGNLIKITGSTRSDDRT 532 Query: 98 PCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 Q N I + G+ L + +VF L + Q +R Sbjct: 533 TYVEQFQNNENIKCALLSITAVNMGVTLTK-ASTVVFAELHYTPGVMVQAEDR-----AH 586 Query: 158 QAGFKRAVFVYYLIAQNTIDELV 180 + G + V + YLIA+NT DE + Sbjct: 587 RIGRETDVNIEYLIAKNTADEWI 609 >gi|253699642|ref|YP_003020831.1| SNF2-related protein [Geobacter sp. M21] gi|251774492|gb|ACT17073.1| SNF2-related protein [Geobacter sp. M21] Length = 1248 Score = 62.3 bits (150), Expect = 4e-08, Method: Composition-based stats. Identities = 20/106 (18%), Positives = 41/106 (38%), Gaps = 10/106 (9%) Query: 96 KDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTR 155 + + ++ P + G G+N+Q N ++ ++ W+ + Q +R Sbjct: 985 RQKKIKEYQERPGFGVIILSPLAVGFGVNIQ-AANHVIHYTRMWNPAKEDQATDR----- 1038 Query: 156 QRQAGFKRAVFVYYLIAQN----TIDELVLQRLRTKSTIQDLLLNA 197 + G + V+VY + + T D + L K I +LN Sbjct: 1039 AYRIGQTKDVYVYTPVVVSPEFTTFDAKLDALLEWKRGISADMLNG 1084 >gi|28868866|ref|NP_791485.1| helicase/SNF2 family domain-containing protein [Pseudomonas syringae pv. tomato str. DC3000] gi|28852105|gb|AAO55180.1| helicase/SNF2 family domain protein [Pseudomonas syringae pv. tomato str. DC3000] Length = 805 Score = 62.3 bits (150), Expect = 4e-08, Method: Composition-based stats. Identities = 26/149 (17%), Positives = 60/149 (40%), Gaps = 24/149 (16%) Query: 52 HDEKIKAL-EVIIEKAN----AAPIIVAYHFNSDLARLQKAF------PQGRTLD----- 95 +D K+K E II K + +++ + + ++ A Q ++ Sbjct: 371 NDLKLKLFIEEIIGKIHVANPDEKVLIFTEYRTTQRYMRDALANHYGGDQVELINGSMRH 430 Query: 96 -KDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 + I+ + + + G G+NLQ +++V + L W+ Q I R+ Sbjct: 431 AERREAIKRFE--QQARFLISTEAGGEGINLQNQCHVMVNYDLPWNPMRLVQRIGRL--- 485 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQR 183 + G K+ V V+ + +++D+ ++ Sbjct: 486 --YRYGQKKKVVVFNIQQTDSLDQNIVDL 512 >gi|16741295|gb|AAH16482.1| SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a-like 1 [Homo sapiens] gi|123981668|gb|ABM82663.1| SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a-like 1 [synthetic construct] gi|123996475|gb|ABM85839.1| SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a-like 1 [synthetic construct] Length = 954 Score = 62.3 bits (150), Expect = 4e-08, Method: Composition-based stats. Identities = 30/181 (16%), Positives = 67/181 (37%), Gaps = 22/181 (12%) Query: 22 AFNSASK----TVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHF 77 A ++A+K K Q A+ + + I+ + ++E +V H Sbjct: 676 ALDAAAKEMTTKDKTKQQQKDALILFFNRTAEAKIPSVIEYILDLLES-GREKFLVFAHH 734 Query: 78 NSDLARLQKAFP---------QGRTLDKDPCTI-QEWN-EGKIPLLFAHPASCGHGLNLQ 126 L + + G T + + Q++ + + + GL Sbjct: 735 KVVLDAITQELERKHVQHIRIDGSTSSAEREDLCQQFQLSERHAVAVLSITAANMGLTF- 793 Query: 127 YGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRT 186 +++VF L+W+ Q +R+ + G +V ++YL+A+ T D+ + ++ Sbjct: 794 SSADLVVFAELFWNPGVLIQAEDRV-----HRIGQTSSVGIHYLVAKGTADDYLWPLIQE 848 Query: 187 K 187 K Sbjct: 849 K 849 >gi|328778817|ref|XP_624010.3| PREDICTED: SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1-like [Apis mellifera] Length = 673 Score = 62.3 bits (150), Expect = 4e-08, Method: Composition-based stats. Identities = 34/199 (17%), Positives = 75/199 (37%), Gaps = 31/199 (15%) Query: 9 RELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKA-- 66 +E+ + + N+ K LQ YY+E K KA+ + K Sbjct: 410 KEMLEISKKLEKKVLNNLEKHNTLLQ------YYNESSI------AKQKAICDYVSKLFI 457 Query: 67 NAAPIIVAYHFNSDLARLQKAFP---------QGRTL-DKDPCTIQEWNEGKIPLL-FAH 115 N I+ H ++ L + + G+T ++ I ++ + Sbjct: 458 NKQKCIIFAHHHNILNAICEVVESMNIKFIRIDGKTNPERRKYEIDKFQNNDSYIAAVLS 517 Query: 116 PASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNT 175 + G+ L +++F L+W+ Q +R+ + G + V + YL+A++T Sbjct: 518 ITAANAGITLT-AAQLVIFAELFWNPGILCQAEDRV-----HRIGQYKNVIIQYLVAKHT 571 Query: 176 IDELVLQRLRTKSTIQDLL 194 D+ + ++ K + + + Sbjct: 572 ADDYLWPLIQKKMNVLNEV 590 >gi|302926211|ref|XP_003054249.1| hypothetical protein NECHADRAFT_30723 [Nectria haematococca mpVI 77-13-4] gi|256735190|gb|EEU48536.1| hypothetical protein NECHADRAFT_30723 [Nectria haematococca mpVI 77-13-4] Length = 1145 Score = 62.3 bits (150), Expect = 4e-08, Method: Composition-based stats. Identities = 33/163 (20%), Positives = 62/163 (38%), Gaps = 18/163 (11%) Query: 36 ANGAVYYDEEKHWKEVHDEKIKALEV-IIEKANAAPIIVAY-------HFNSDLARLQ-K 86 A GA+ E K+ L II+ I+V Y + S L LQ + Sbjct: 858 AEGALGPLEAARITSTASSKLSYLIDGIIKYQEDEKIVVFYENENAAWYLASVLETLQIQ 917 Query: 87 AFPQGR--TLDKDPCTIQEW-NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEE 143 R T + ++ + +L GL+++ + + F S + + Sbjct: 918 HLIYARGLTNKRKGQYVKTFLVNPDFRVLLMDITQAAFGLDIRV-ASRIYFISPVLNPQV 976 Query: 144 HQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRT 186 Q I R R+ ++ V V L+ N+I+E++++R + Sbjct: 977 EAQAIGR-----ARRISQQKPVSVETLVLSNSIEEIIIERKQH 1014 >gi|6693791|gb|AAF24984.1|AF082179_1 HepA-related protein HARP [Homo sapiens] Length = 954 Score = 62.3 bits (150), Expect = 4e-08, Method: Composition-based stats. Identities = 30/181 (16%), Positives = 67/181 (37%), Gaps = 22/181 (12%) Query: 22 AFNSASK----TVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHF 77 A ++A+K K Q A+ + + I+ + ++E +V H Sbjct: 676 ALDAAAKEMTTKDKTKQQQKDALILFFNRTAEAKIPSVIEYILDLLES-GREKFLVFAHH 734 Query: 78 NSDLARLQKAFP---------QGRTLDKDPCTI-QEWN-EGKIPLLFAHPASCGHGLNLQ 126 L + + G T + + Q++ + + + GL Sbjct: 735 KVVLDAITQELERKHVQHIRIDGSTSSAEREDLCQQFQLSERHAVAVLSITAANMGLTF- 793 Query: 127 YGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRT 186 +++VF L+W+ Q +R+ + G +V ++YL+A+ T D+ + ++ Sbjct: 794 SSADLVVFAELFWNPGVLIQAEDRV-----HRIGQTSSVGIHYLVAKGTADDYLWPLIQE 848 Query: 187 K 187 K Sbjct: 849 K 849 >gi|21071060|ref|NP_054859.2| SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1 [Homo sapiens] gi|187761314|ref|NP_001120679.1| SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1 [Homo sapiens] gi|60390962|sp|Q9NZC9|SMAL1_HUMAN RecName: Full=SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1; AltName: Full=HepA-related protein; Short=hHARP; AltName: Full=Sucrose nonfermenting protein 2-like 1 gi|18463933|gb|AAL73034.1|AF432223_1 SMARCAL1 [Homo sapiens] gi|7861961|gb|AAF70454.1| HARP [Homo sapiens] gi|27696616|gb|AAH43341.1| SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a-like 1 [Homo sapiens] gi|62702171|gb|AAX93097.1| unknown [Homo sapiens] gi|119590973|gb|EAW70567.1| SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a-like 1 [Homo sapiens] Length = 954 Score = 62.3 bits (150), Expect = 4e-08, Method: Composition-based stats. Identities = 30/181 (16%), Positives = 67/181 (37%), Gaps = 22/181 (12%) Query: 22 AFNSASK----TVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHF 77 A ++A+K K Q A+ + + I+ + ++E +V H Sbjct: 676 ALDAAAKEMTTKDKTKQQQKDALILFFNRTAEAKIPSVIEYILDLLES-GREKFLVFAHH 734 Query: 78 NSDLARLQKAFP---------QGRTLDKDPCTI-QEWN-EGKIPLLFAHPASCGHGLNLQ 126 L + + G T + + Q++ + + + GL Sbjct: 735 KVVLDAITQELERKHVQHIRIDGSTSSAEREDLCQQFQLSERHAVAVLSITAANMGLTF- 793 Query: 127 YGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRT 186 +++VF L+W+ Q +R+ + G +V ++YL+A+ T D+ + ++ Sbjct: 794 SSADLVVFAELFWNPGVLIQAEDRV-----HRIGQTSSVGIHYLVAKGTADDYLWPLIQE 848 Query: 187 K 187 K Sbjct: 849 K 849 >gi|289618275|emb|CBI54999.1| unnamed protein product [Sordaria macrospora] Length = 1110 Score = 62.3 bits (150), Expect = 4e-08, Method: Composition-based stats. Identities = 25/140 (17%), Positives = 53/140 (37%), Gaps = 17/140 (12%) Query: 72 IVAYHFNSDLARLQKAFPQGR----------TLDKDPCTIQEW-NEGKIPLLFAHPASCG 120 +V + S L ++ AF T + ++ + + ++ + G Sbjct: 955 VVFSGWTSHLDLIELAFNDVGIIFTRLDGKMTRTARTAAMDKFREDPSVQVILVSIMAGG 1014 Query: 121 HGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELV 180 GLNL ++ V ++ Q ++R+ + G KR V I N+ +E + Sbjct: 1015 LGLNLTTASSVYVM-EPQFNPAAEAQAVDRV-----HRLGQKRPVRTVRYIMANSFEEKM 1068 Query: 181 LQRLRTKSTIQDLLLNALKK 200 L+ K + L ++ +K Sbjct: 1069 LKLQDKKKKLASLSMDGREK 1088 >gi|114583208|ref|XP_516076.2| PREDICTED: SWI/SNF-related matrix-associated actin-dependent regulator of chromatin a-like 1 isoform 6 [Pan troglodytes] gi|114583210|ref|XP_001153008.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent regulator of chromatin a-like 1 isoform 3 [Pan troglodytes] gi|114583212|ref|XP_001153124.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent regulator of chromatin a-like 1 isoform 5 [Pan troglodytes] Length = 954 Score = 62.3 bits (150), Expect = 4e-08, Method: Composition-based stats. Identities = 30/181 (16%), Positives = 67/181 (37%), Gaps = 22/181 (12%) Query: 22 AFNSASK----TVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHF 77 A ++A+K K Q A+ + + I+ + ++E +V H Sbjct: 676 ALDAAAKEMTTKDKTKQQQKDALILFFNRTAEAKIPSVIEYILDLLES-GREKFLVFAHH 734 Query: 78 NSDLARLQKAFP---------QGRTLDKDPCTI-QEWN-EGKIPLLFAHPASCGHGLNLQ 126 L + + G T + + Q++ + + + GL Sbjct: 735 KVVLDAITQELERKHVQHIRIDGSTSSAEREDLCQQFQLSERHAVAVLSITAANMGLTF- 793 Query: 127 YGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRT 186 +++VF L+W+ Q +R+ + G +V ++YL+A+ T D+ + ++ Sbjct: 794 SSADLVVFAELFWNPGVLIQAEDRV-----HRIGQTSSVGIHYLVAKGTADDYLWPLIQE 848 Query: 187 K 187 K Sbjct: 849 K 849 >gi|255087256|ref|XP_002505551.1| SNF2 super family [Micromonas sp. RCC299] gi|226520821|gb|ACO66809.1| SNF2 super family [Micromonas sp. RCC299] Length = 700 Score = 62.3 bits (150), Expect = 4e-08, Method: Composition-based stats. Identities = 29/161 (18%), Positives = 62/161 (38%), Gaps = 18/161 (11%) Query: 57 KALEVIIEKAN-AAPIIVAYHFNSDLAR----LQKAFPQGRTLD------KDPCTIQEWN 105 LE +++ + + H L L+K Q +D + +Q++ Sbjct: 461 DYLETLLDGSGAGDKFLFFAHHKELLDAASTVLRKRKTQFIRIDGTTPTTERGGLVQQFQ 520 Query: 106 EGK-IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA 164 I + + G GL L + +VF L W + Q +R + G + Sbjct: 521 TVDAIKVAVLSIKAAGMGLTLT-AASTVVFGELSWTPGDIVQAEDR-----AHRIGQASS 574 Query: 165 VFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIHV 205 V V +L A+N++D+++ ++ K +L+ + + + Sbjct: 575 VLVQFLHAKNSVDDVMWGSVQNKLENLGQVLDGHMGDHLEI 615 >gi|320040099|gb|EFW22033.1| conserved hypothetical protein [Coccidioides posadasii str. Silveira] Length = 2095 Score = 61.9 bits (149), Expect = 5e-08, Method: Composition-based stats. Identities = 36/193 (18%), Positives = 68/193 (35%), Gaps = 43/193 (22%) Query: 38 GAVYYDEEKHWKEVHDEKIKALEVIIEKANAAP----IIVAYHFNSDLARLQKAFPQGRT 93 G V + W E KI L +++ + P +++ F + + KA + Sbjct: 1880 GEVPQSPDDSWTEFGGSKIGELVKLLQDTSRIPEDDQVLIFIQFTDLVTAVSKALGKAGI 1939 Query: 94 LD--------KDPCTIQEWNEGKIPL-----LFAHPASCGHGLNLQYGGNILVFFSLWWD 140 ++ ++ G + + A GLNLQ N +VFF Sbjct: 1940 RHITIIAKDRSAGKSLADFQNGTEEVKSKALILALGDVTASGLNLQ-AANHIVFFHPLIA 1998 Query: 141 LEEH------QQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRT-------- 186 ++ Q + R R+ G ++ V +Y+ +A T++ + +R R Sbjct: 1999 RSQYDYESGMSQAMGR-----SRRYGQQKHVHIYHFLALKTVEVNIFERRRRECLVKRDK 2053 Query: 187 ------KSTIQDL 193 K+ IQD Sbjct: 2054 IFVSLLKNEIQDA 2066 >gi|302906263|ref|XP_003049441.1| hypothetical protein NECHADRAFT_106263 [Nectria haematococca mpVI 77-13-4] gi|256730376|gb|EEU43728.1| hypothetical protein NECHADRAFT_106263 [Nectria haematococca mpVI 77-13-4] Length = 750 Score = 61.9 bits (149), Expect = 5e-08, Method: Composition-based stats. Identities = 25/147 (17%), Positives = 51/147 (34%), Gaps = 27/147 (18%) Query: 53 DEKIKALEVIIEKA---NAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKI 109 K+ A+ I+ + + +V + + L L I Sbjct: 605 SSKLSAVVDNIKSSGLEEDSKSVVFTSWRTTLDMLAGILS------------------NI 646 Query: 110 PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYY 169 +L + GL L N++ W+ +Q I R+ + G R V V+ Sbjct: 647 RVLLISINTGAVGLTLTK-ANVVHIVEPQWNPAIEEQAITRVV-----RMGQTRPVTVFK 700 Query: 170 LIAQNTIDELVLQRLRTKSTIQDLLLN 196 I ++++ V++ + K+ I L + Sbjct: 701 YIMNESVEQGVVKLQQRKTRIVKLSMQ 727 >gi|303312199|ref|XP_003066111.1| DNA repair helicase, putative [Coccidioides posadasii C735 delta SOWgp] gi|240105773|gb|EER23966.1| DNA repair helicase, putative [Coccidioides posadasii C735 delta SOWgp] Length = 2149 Score = 61.9 bits (149), Expect = 5e-08, Method: Composition-based stats. Identities = 36/193 (18%), Positives = 68/193 (35%), Gaps = 43/193 (22%) Query: 38 GAVYYDEEKHWKEVHDEKIKALEVIIEKANAAP----IIVAYHFNSDLARLQKAFPQGRT 93 G V + W E KI L +++ + P +++ F + + KA + Sbjct: 1934 GEVPQSPDDSWTEFGGSKIGELVKLLQDTSRIPEDDQVLIFIQFTDLVTAVSKALGKAGI 1993 Query: 94 LD--------KDPCTIQEWNEGKIPL-----LFAHPASCGHGLNLQYGGNILVFFSLWWD 140 ++ ++ G + + A GLNLQ N +VFF Sbjct: 1994 RHITIIANDRSAGKSLADFQNGTEEVKSKALILALGDVTASGLNLQ-AANHIVFFHPLIA 2052 Query: 141 LEEH------QQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRT-------- 186 ++ Q + R R+ G ++ V +Y+ +A T++ + +R R Sbjct: 2053 RSQYDYESGMSQAMGR-----SRRYGQQKHVHIYHFLALKTVEVNIFERRRRECLVKRDK 2107 Query: 187 ------KSTIQDL 193 K+ IQD Sbjct: 2108 IFVSLLKNEIQDA 2120 >gi|114583214|ref|XP_001153069.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent regulator of chromatin a-like 1 isoform 4 [Pan troglodytes] Length = 932 Score = 61.9 bits (149), Expect = 5e-08, Method: Composition-based stats. Identities = 30/181 (16%), Positives = 67/181 (37%), Gaps = 22/181 (12%) Query: 22 AFNSASK----TVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHF 77 A ++A+K K Q A+ + + I+ + ++E +V H Sbjct: 654 ALDAAAKEMTTKDKTKQQQKDALILFFNRTAEAKIPSVIEYILDLLES-GREKFLVFAHH 712 Query: 78 NSDLARLQKAFP---------QGRTLDKDPCTI-QEWN-EGKIPLLFAHPASCGHGLNLQ 126 L + + G T + + Q++ + + + GL Sbjct: 713 KVVLDAITQELERKHVQHIRIDGSTSSAEREDLCQQFQLSERHAVAVLSITAANMGLTF- 771 Query: 127 YGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRT 186 +++VF L+W+ Q +R+ + G +V ++YL+A+ T D+ + ++ Sbjct: 772 SSADLVVFAELFWNPGVLIQAEDRV-----HRIGQTSSVGIHYLVAKGTADDYLWPLIQE 826 Query: 187 K 187 K Sbjct: 827 K 827 >gi|303313780|ref|XP_003066899.1| SNF2 family N-terminal domain containing protein [Coccidioides posadasii C735 delta SOWgp] gi|240106566|gb|EER24754.1| SNF2 family N-terminal domain containing protein [Coccidioides posadasii C735 delta SOWgp] Length = 1419 Score = 61.9 bits (149), Expect = 5e-08, Method: Composition-based stats. Identities = 25/120 (20%), Positives = 42/120 (35%), Gaps = 10/120 (8%) Query: 68 AAPIIVAYHFNSDLARLQKAFPQGRT----LDKDPCTIQEWNEGKIPLLFAHPASCGHGL 123 A IV + S LA L AF + R D + + I H + GL Sbjct: 1189 GAKSIVFSQYKSFLAILASAFSRFRIEFSSFDSYNGIERFKQDPSIECFLLHAKAHSSGL 1248 Query: 124 NLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQR 183 NL + + + Q I R+ + G R V+ + ++++E + Q Sbjct: 1249 NLVNATH-VFLCEPLINTAIELQAIARV-----HRIGQHRETTVWMYLVSDSVEESIYQL 1302 >gi|297827713|ref|XP_002881739.1| SNF2 domain-containing protein [Arabidopsis lyrata subsp. lyrata] gi|297327578|gb|EFH57998.1| SNF2 domain-containing protein [Arabidopsis lyrata subsp. lyrata] Length = 1635 Score = 61.9 bits (149), Expect = 5e-08, Method: Composition-based stats. Identities = 27/141 (19%), Positives = 51/141 (36%), Gaps = 26/141 (18%) Query: 69 APIIVAYHFNSDLARLQKAF----------PQGRT-------LDKDPCTIQEWNEGK--- 108 A ++V +N L LQ AF GR Q+ N+ + Sbjct: 1423 AKVLVFSSWNDVLDVLQHAFAANSITCIRMKGGRKSQTAISKFKGSEKETQKTNQKEENP 1482 Query: 109 IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVY 168 I +L +GLNL + ++ + Q + R+ + G ++ V+ Sbjct: 1483 IQVLLLLVQHGANGLNLLEAQH-VILVEPLLNPAAEAQAVGRV-----HRIGQEKPTLVH 1536 Query: 169 YLIAQNTIDELVLQRLRTKST 189 + T++E + + R K+T Sbjct: 1537 RFLVTGTVEESIYKLNRNKNT 1557 >gi|322708739|gb|EFZ00316.1| SNF2 family helicase [Metarhizium anisopliae ARSEF 23] Length = 1144 Score = 61.9 bits (149), Expect = 5e-08, Method: Composition-based stats. Identities = 31/154 (20%), Positives = 66/154 (42%), Gaps = 18/154 (11%) Query: 45 EKHWKEVHDEKIKALEV-IIEKANAAPIIVAY-------HFNSDLARLQ-KAFPQGRTL- 94 + H K+ L I+ + II+ Y + S L LQ + RTL Sbjct: 861 QTHLVSTVSSKLSYLIDSIVRHQDDDKIIIFYENENVAWYLASVLDMLQVQHLIYARTLT 920 Query: 95 -DKDPCTIQEWNEGKI-PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIG 152 ++ + ++ + +L + GL+++ + + F + + + Q I R+ Sbjct: 921 TERKAQYVNTFHHNPVFRVLLMDLSQAAFGLDMRE-ASRVYFINPVLNPQVEAQAIGRV- 978 Query: 153 VTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRT 186 R+ ++ VFV L+ +++IDE++L+R + Sbjct: 979 ----RRISQQKPVFVETLVLKDSIDEVILERKQH 1008 >gi|327350451|gb|EGE79308.1| SNF2 family helicase [Ajellomyces dermatitidis ATCC 18188] Length = 1214 Score = 61.9 bits (149), Expect = 5e-08, Method: Composition-based stats. Identities = 28/175 (16%), Positives = 62/175 (35%), Gaps = 34/175 (19%) Query: 49 KEVHDEKIKALEV-IIEKANAAPIIVAYH-------------FNSDLARLQKAFPQGRTL 94 K+ L ++E II+ Y S R+ + +T Sbjct: 916 VATASAKLTYLLDKVLEFQEQEKIIIFYEGNNTGFYIAEGLEILSVEFRIYANTLKTQTR 975 Query: 95 DKDPCTIQEWNEGK-IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGV 153 + +NE + + +L HGL++ + + + WD Q I+R Sbjct: 976 ---SEYLSLFNETETVRVLLMDLRQASHGLHI-ACASRVFIVNPIWDPNIESQAIKR--- 1028 Query: 154 TRQRQAGFKRAVFVYYLIAQNTIDELVLQRLR----------TKSTIQDLLLNAL 198 + + V+V L+ + T+++ +L+R + K + D ++++ Sbjct: 1029 --AHRISQTKPVYVETLVLKGTLEDRMLRRRKQMSTTELRHAEKDPLDDQTMSSI 1081 >gi|6102878|emb|CAB59251.1| hypothetical protein [Homo sapiens] Length = 808 Score = 61.9 bits (149), Expect = 5e-08, Method: Composition-based stats. Identities = 30/181 (16%), Positives = 67/181 (37%), Gaps = 22/181 (12%) Query: 22 AFNSASK----TVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHF 77 A ++A+K K Q A+ + + I+ + ++E +V H Sbjct: 530 ALDAAAKEMTTKDKTKQQQKDALILFFNRTAEAKIPSVIEYILDLLES-GREKFLVFAHH 588 Query: 78 NSDLARLQKAFP---------QGRTLDKDPCTI-QEWN-EGKIPLLFAHPASCGHGLNLQ 126 L + + G T + + Q++ + + + GL Sbjct: 589 KVVLDAITQELERKHVQHIRIDGSTSSAEREDLCQQFQLSERHAVAVLSITAANMGLTF- 647 Query: 127 YGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRT 186 +++VF L+W+ Q +R+ + G +V ++YL+A+ T D+ + ++ Sbjct: 648 SSADLVVFAELFWNPGVLIQAEDRV-----HRIGQTSSVGIHYLVAKGTADDYLWPLIQE 702 Query: 187 K 187 K Sbjct: 703 K 703 >gi|239607939|gb|EEQ84926.1| SNF2 family helicase [Ajellomyces dermatitidis ER-3] Length = 1214 Score = 61.9 bits (149), Expect = 5e-08, Method: Composition-based stats. Identities = 28/172 (16%), Positives = 62/172 (36%), Gaps = 28/172 (16%) Query: 49 KEVHDEKIKALEV-IIEKANAAPIIVAYHFNSDLARLQKAFP--------QGRTLDK--D 97 K+ L ++E II+ Y N+ + + TL Sbjct: 916 VATASAKLTYLLDKVLEFQEQEKIIIFYEGNNTGFYIAEGLEILGVEFRIYANTLKTQTR 975 Query: 98 PCTIQEWNEGK-IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 + +NE + + +L HGL++ + + + WD Q I+R Sbjct: 976 SEYLSLFNETETVRVLLMDLRQASHGLHI-ACASRVFIVNPIWDPNIESQAIKR-----A 1029 Query: 157 RQAGFKRAVFVYYLIAQNTIDELVLQRLR----------TKSTIQDLLLNAL 198 + + V+V L+ + T+++ +L+R + K + D ++++ Sbjct: 1030 HRISQTKPVYVETLVLKGTLEDRMLRRRKQMSTTELRHAEKDPLDDQTMSSI 1081 >gi|261199876|ref|XP_002626339.1| SNF2 family helicase [Ajellomyces dermatitidis SLH14081] gi|239594547|gb|EEQ77128.1| SNF2 family helicase [Ajellomyces dermatitidis SLH14081] Length = 1214 Score = 61.9 bits (149), Expect = 5e-08, Method: Composition-based stats. Identities = 28/172 (16%), Positives = 62/172 (36%), Gaps = 28/172 (16%) Query: 49 KEVHDEKIKALEV-IIEKANAAPIIVAYHFNSDLARLQKAFP--------QGRTLDK--D 97 K+ L ++E II+ Y N+ + + TL Sbjct: 916 VATASAKLTYLLDKVLEFQEQEKIIIFYEGNNTGFYIAEGLEILGVEFRIYANTLKTQTR 975 Query: 98 PCTIQEWNEGK-IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 + +NE + + +L HGL++ + + + WD Q I+R Sbjct: 976 SEYLSLFNETETVRVLLMDLRQASHGLHI-ACASRVFIVNPIWDPNIESQAIKR-----A 1029 Query: 157 RQAGFKRAVFVYYLIAQNTIDELVLQRLR----------TKSTIQDLLLNAL 198 + + V+V L+ + T+++ +L+R + K + D ++++ Sbjct: 1030 HRISQTKPVYVETLVLKGTLEDRMLRRRKQMSTAELRHAEKDPLDDQTMSSI 1081 >gi|322693650|gb|EFY85503.1| SNF2 family helicase/ATPase, putative [Metarhizium acridum CQMa 102] Length = 1355 Score = 61.9 bits (149), Expect = 5e-08, Method: Composition-based stats. Identities = 26/186 (13%), Positives = 57/186 (30%), Gaps = 33/186 (17%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEV 61 Y +F + +++ ++ + +K ++ L Sbjct: 1097 AIYSEFNADKLAEIKNVELDGPSFTTKVDTL-----------------------VRHLLW 1133 Query: 62 IIEKANAAPIIVAYHFNSDLARLQKAFPQGRT----LDKDPCTIQEWNEGKIPLLFAHPA 117 + E A IV + L L+ AF + R +D + + + H Sbjct: 1134 LRESDPGAKSIVFSQYRDFLHILRNAFRRFRIGHASIDDVNGIASFKEDPAVEVFLLHAR 1193 Query: 118 SCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 + GLNL + + + Q I R+ + G + V+ + T++ Sbjct: 1194 AHSSGLNLVNASH-VFLCEPLLNTALELQAIARVD-----RIGQQHETTVWLYLVSGTVE 1247 Query: 178 ELVLQR 183 E + Sbjct: 1248 ESIYNL 1253 >gi|196035256|ref|ZP_03102662.1| helicase domain protein [Bacillus cereus W] gi|195992320|gb|EDX56282.1| helicase domain protein [Bacillus cereus W] Length = 1063 Score = 61.9 bits (149), Expect = 5e-08, Method: Composition-based stats. Identities = 36/197 (18%), Positives = 82/197 (41%), Gaps = 22/197 (11%) Query: 5 HKFQRELYCDLQG-ENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVII 63 K +++L + + E + +Q A Y EK ++E+ + A ++ Sbjct: 426 EKLEKQLEKSIDVIDTKELKKELIVLKELIQQAENIKLYVVEKKYQELEETLFGASGLL- 484 Query: 64 EKANAAPIIVAYHFNSDLARLQKAFPQGRTL----------DKDPCTIQEWNEGKIPLLF 113 + I++ L+ L++ + ++ ++ + + ++ Sbjct: 485 --NHDEKILIFTESVDTLSYLEEKLLKRVPKIAKIIGSLSMEQRRKQVEMFRN-ECQIMI 541 Query: 114 AHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQ 173 A + G +NLQ+ N ++ + + W+ + +Q + RI + G K VFV+ L+AQ Sbjct: 542 A-TDAGGESINLQF-CNQMINYDIPWNPNKLEQRMGRI-----HRIGQKNEVFVFNLVAQ 594 Query: 174 NTIDELVLQRLRTKSTI 190 NT + V+ +L K + Sbjct: 595 NTREGSVMTKLLDKMEL 611 >gi|195401136|ref|XP_002059170.1| GJ16178 [Drosophila virilis] gi|194156044|gb|EDW71228.1| GJ16178 [Drosophila virilis] Length = 714 Score = 61.9 bits (149), Expect = 5e-08, Method: Composition-based stats. Identities = 28/153 (18%), Positives = 51/153 (33%), Gaps = 19/153 (12%) Query: 51 VHDEKIKALEVIIEKANAAPI--IVAYHFNSDLARLQKAFPQGRTL----------DKDP 98 + K +A+ ++ PI I+ H + + + R D Sbjct: 492 TAEVKTRAVCAYLKSLVKEPIKFIIFAHHRVMMDAISDCLNELRISFIRIDGQTRSDLRA 551 Query: 99 CTIQEWNEGK-IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 + + + SC G+ L ++VF L W+ Q +R Sbjct: 552 AYVDTFQKKSSCKAAVLSLKSCNAGITLT-AAEMIVFAELDWNPSTLAQA-----ESRAH 605 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 + G + V YL+A T D+ + LR K + Sbjct: 606 RIGQTKPVVCRYLMANQTADDTIWNMLRNKQEV 638 >gi|307580244|gb|ADN64213.1| SNF2-related protein [Xylella fastidiosa subsp. fastidiosa GB514] Length = 330 Score = 61.9 bits (149), Expect = 5e-08, Method: Composition-based stats. Identities = 25/53 (47%), Positives = 39/53 (73%), Gaps = 2/53 (3%) Query: 2 KQYHKFQRELYCDLQ-GENIEAFNSASKTVKCLQLANGAVYYDEEKH-WKEVH 52 + Y +++++ L+ G +EAFN+ASKT+KCLQLANGA+Y D+ + W+ VH Sbjct: 257 RLYKAMEQDMFIALECGAEVEAFNAASKTIKCLQLANGALYTDDTRQAWEVVH 309 >gi|254481757|ref|ZP_05095000.1| Type III restriction enzyme, res subunit family [marine gamma proteobacterium HTCC2148] gi|214037886|gb|EEB78550.1| Type III restriction enzyme, res subunit family [marine gamma proteobacterium HTCC2148] Length = 1180 Score = 61.9 bits (149), Expect = 5e-08, Method: Composition-based stats. Identities = 33/151 (21%), Positives = 58/151 (38%), Gaps = 24/151 (15%) Query: 51 VHDEKIKALEVIIEKANAAP---IIVAYHFNSDLARLQKAFPQG---------------R 92 D K L+ II++ A P ++V F L+ L + Q R Sbjct: 656 DDDPKYDRLKKIIQEKQALPNRRLMVFSTFRHTLSYLSERLTQDGYEIGLVHGGVPDSER 715 Query: 93 TLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIG 152 L ++ + + + +L GL+ Q+ + +V + L W+ + +Q I RI Sbjct: 716 VLLRNRFKLDSNDSDSLDVLLFS-EVGCEGLDYQF-CDAMVNYDLPWNPMKIEQRIGRID 773 Query: 153 VTRQRQAGFKRAVFVYYLIAQNTIDELVLQR 183 Q+ V +Y LI T+D + R Sbjct: 774 RNGQK----SEKVVIYNLITPGTVDAEIYDR 800 >gi|84616885|emb|CAJ13779.1| virulence associated protein [Desulfococcus multivorans] Length = 965 Score = 61.9 bits (149), Expect = 5e-08, Method: Composition-based stats. Identities = 26/156 (16%), Positives = 59/156 (37%), Gaps = 26/156 (16%) Query: 49 KEVHDEKIKALEVII------EKANAAPIIVAYHFNSDLARLQKAFPQGR---------- 92 + D K +AL I E +++ F ++ K F + R Sbjct: 476 QAGPDAKAEALIEWIYKLQAEENEPDLKVLIFTEFVPT-QQMLKEFLEARGISVVTLNGS 534 Query: 93 -TLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERI 151 +++ + K + + G GLNLQ+ ++++ + + W+ +Q I R+ Sbjct: 535 MAMEERGAAQDAF--RKSHRVLVSTDAGGEGLNLQF-AHVIINYDIPWNPMRLEQRIGRV 591 Query: 152 GVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTK 187 + G + V + +++++ V + L K Sbjct: 592 D-----RIGQPKTVQAINFVFEDSVEFRVREVLEQK 622 >gi|62327174|ref|YP_223931.1| helicase [Phage phiJL001] gi|50059492|gb|AAT69464.1| helicase [Phage phiJL001] Length = 513 Score = 61.9 bits (149), Expect = 5e-08, Method: Composition-based stats. Identities = 41/215 (19%), Positives = 79/215 (36%), Gaps = 29/215 (13%) Query: 2 KQYHKFQRELYCDL--QGENIEAFNSASK----TVKCLQLANGAVYYDEEKH---WKEVH 52 K Y + + EL + G +IE +A ++ Q+ G + + E+ + + VH Sbjct: 303 KMYEQIREELMAMVRADGSDIETLLTAELPIVNVLRLYQITAGYLPFQEDVNGEPVERVH 362 Query: 53 DEKIK-----ALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTL-------DKDPCT 100 K AL + + + +V F D+ L A + D+ Sbjct: 363 TFKENPRLETALAELRRQTDKT--VVWCRFTRDIDLLTAALGKFAVRFDGSISEDERAQN 420 Query: 101 IQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 QEW +G L + G L +L +++ L R R + Sbjct: 421 KQEWLKGDAQYLVPQIQAMARGHTLNIAPYVL-YYTNDARLRL-----RRQSEDRTHRGK 474 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 +V ++A +T+DE ++ LR K + + ++ Sbjct: 475 MNFSVLYGDMLASDTVDEKRVKSLRKKLAVAETIM 509 >gi|146329165|ref|YP_001209106.1| DEAD helicase domain-containing protein VrlO [Dichelobacter nodosus VCS1703A] gi|2317808|gb|AAC33384.1| putative DEAH ATP-dependent helicase [Dichelobacter nodosus] gi|146232635|gb|ABQ13613.1| DEAD helicase domain protein VrlO [Dichelobacter nodosus VCS1703A] Length = 965 Score = 61.9 bits (149), Expect = 5e-08, Method: Composition-based stats. Identities = 26/156 (16%), Positives = 59/156 (37%), Gaps = 26/156 (16%) Query: 49 KEVHDEKIKALEVII------EKANAAPIIVAYHFNSDLARLQKAFPQGR---------- 92 + D K +AL I E +++ F ++ K F + R Sbjct: 476 QAGPDAKAEALIEWIYKLQAEENEPDLKVLIFTEFVPT-QQMLKEFLEARGISVVTLNGS 534 Query: 93 -TLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERI 151 +++ + K + + G GLNLQ+ ++++ + + W+ +Q I R+ Sbjct: 535 MAMEERGAAQDAF--RKSHRVLVSTDAGGEGLNLQF-AHVIINYDIPWNPMRLEQRIGRV 591 Query: 152 GVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTK 187 + G + V + +++++ V + L K Sbjct: 592 D-----RIGQPKTVQAINFVFEDSVEFRVREVLEQK 622 >gi|93005784|ref|YP_580221.1| SNF2-related [Psychrobacter cryohalolentis K5] gi|92393462|gb|ABE74737.1| SNF2-related [Psychrobacter cryohalolentis K5] Length = 1075 Score = 61.9 bits (149), Expect = 5e-08, Method: Composition-based stats. Identities = 35/161 (21%), Positives = 67/161 (41%), Gaps = 29/161 (18%) Query: 56 IKALEVIIEKANAAPIIVAYHFNS---DLARL--QKAFPQGRTLDKDPCT---------- 100 I LE I K +I+ F + L RL ++ T++ D T Sbjct: 908 INTLETI--KQKNEKVIIFTEFRAIQVFLKRLLLERFGLNVTTVNGDSNTNSRVGLTRQG 965 Query: 101 -IQEWNEGK-IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQ 158 I ++ E ++ + G G+N+Q N ++ ++ W+ + Q +R + Sbjct: 966 IIDKFQETNGFNVIILSTVAVGFGVNIQK-ANHVIHYTRSWNPAKEDQATDR-----AYR 1019 Query: 159 AGFKRAVFVYY-LIAQN---TIDELVLQRLRTKSTIQDLLL 195 G + V+VYY IA + T + + + L +K ++ D +L Sbjct: 1020 IGQDKEVYVYYPSIAADDFETFEIKLDKLLSSKRSLADDML 1060 >gi|121707834|ref|XP_001271954.1| SNF2 family helicase, putative [Aspergillus clavatus NRRL 1] gi|119400102|gb|EAW10528.1| SNF2 family helicase, putative [Aspergillus clavatus NRRL 1] Length = 1190 Score = 61.9 bits (149), Expect = 6e-08, Method: Composition-based stats. Identities = 22/97 (22%), Positives = 43/97 (44%), Gaps = 9/97 (9%) Query: 103 EWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFK 162 +NE +I + HGL++ + + F + W Q I+R + G Sbjct: 948 RYNE-EIRVFLMDLNQASHGLHI-ANASRVFFVNPVWQPNIESQAIKR-----AHRIGQT 1000 Query: 163 RAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 R V+V L+ ++T+++ +L+R K+ + A K Sbjct: 1001 RPVYVETLVLKDTLEDRMLKR--RKAMSDQEMQEAEK 1035 >gi|297484680|ref|XP_002694499.1| PREDICTED: E1A binding protein p400 [Bos taurus] gi|296478660|gb|DAA20775.1| E1A binding protein p400 [Bos taurus] Length = 3095 Score = 61.9 bits (149), Expect = 6e-08, Method: Composition-based stats. Identities = 22/147 (14%), Positives = 59/147 (40%), Gaps = 19/147 (12%) Query: 49 KEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQK----------AFPQGRTLDK 96 + K++AL ++++K + +++ L L+ + ++ Sbjct: 1852 VQFDSGKLEALAILLQKLKSEGRRVLILSQMVLMLDILEMFLNFHYLTYIRIDENANSEQ 1911 Query: 97 DPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTR 155 ++ +N + +I S G++L + +VF+ + + E Sbjct: 1912 RQELMRSFNRDRRIFCALLSTHSRATGVSLVE-ADAVVFYDHDLNPVMDAKAQEWCD--- 1967 Query: 156 QRQAGFKRAVFVYYLIAQNTIDELVLQ 182 + G ++ V +Y L++ N+I+E +L+ Sbjct: 1968 --RIGRRKDVHIYRLVSGNSIEEKLLK 1992 >gi|190344733|gb|EDK36473.2| hypothetical protein PGUG_00571 [Meyerozyma guilliermondii ATCC 6260] Length = 1263 Score = 61.9 bits (149), Expect = 6e-08, Method: Composition-based stats. Identities = 20/82 (24%), Positives = 35/82 (42%), Gaps = 10/82 (12%) Query: 119 CGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDE 178 HGLN+ + + F S W Q I+R + G +AV V LI +NT++E Sbjct: 1065 AAHGLNITAATH-VYFTSPVWSRSVEAQAIKR-----AHRIGQTKAVRVETLILKNTLEE 1118 Query: 179 LVLQRL----RTKSTIQDLLLN 196 + ++ Q +++ Sbjct: 1119 EIYRKRSQETEENDREQKYVID 1140 >gi|22331785|ref|NP_680129.1| SNF2 domain-containing protein / helicase domain-containing protein / F-box family protein [Arabidopsis thaliana] gi|75181828|sp|Q9M1I1|FB304_ARATH RecName: Full=F-box protein At3g54460 gi|7258349|emb|CAB77566.1| RING finger-like protein [Arabidopsis thaliana] gi|20259494|gb|AAM13867.1| unknown protein [Arabidopsis thaliana] gi|28393845|gb|AAO42330.1| unknown protein [Arabidopsis thaliana] gi|110742559|dbj|BAE99194.1| RING finger -like protein [Arabidopsis thaliana] Length = 1378 Score = 61.9 bits (149), Expect = 6e-08, Method: Composition-based stats. Identities = 26/139 (18%), Positives = 49/139 (35%), Gaps = 19/139 (13%) Query: 70 PIIVAYHFNSDLARLQKAFPQGRTL-----------DKDPCTIQEWNEGKIPLLFAHPAS 118 +++ F + +++ +K N+ L S Sbjct: 1195 KVLIFSQFLEHIHVIEQQLTTAGIKFGKMYSPMQSYNKMKALAMFQNDADCMALLMD-GS 1253 Query: 119 CGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDE 178 GL+L + + + WD +Q+I R + G KR +FV L + TI+E Sbjct: 1254 GALGLDLSFVTH-VFLMEPIWDKSLEEQVISR-----AHRMGAKRPIFVETLTMRGTIEE 1307 Query: 179 LVLQRLRTKSTIQDLLLNA 197 +++ L D LL+ Sbjct: 1308 QMMRFLEDAEK-SDRLLSG 1325 >gi|159027513|emb|CAO89477.1| unnamed protein product [Microcystis aeruginosa PCC 7806] Length = 1171 Score = 61.9 bits (149), Expect = 6e-08, Method: Composition-based stats. Identities = 33/184 (17%), Positives = 66/184 (35%), Gaps = 24/184 (13%) Query: 27 SKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKAN-AAPIIVAYHFNSDLARLQ 85 + K LAN +++ W+E ++ + + I+V L L+ Sbjct: 465 ALLKKLEDLANSVRRSGKDRKWEE-FSHLLQDEAEMFDAGGYRRKIVVFTEHRDTLNYLK 523 Query: 86 KAF------PQGRT-------LDKDPCTIQEW-NEGKIPLLFAHPASCGHGLNLQYGGNI 131 + P+ + + + + + +L A + G G+NLQ ++ Sbjct: 524 ERISTLLGNPEAVVTIHGGMGREDRKKAEEGFKQDVGVQVLLA-TDAAGEGINLQR-AHL 581 Query: 132 LVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTK-STI 190 +V + L W+ +Q RI + G ++ L+A T + V + L K Sbjct: 582 MVNYDLPWNPNRLEQRFGRI-----HRIGQTEVCHLWNLVAHETREGDVYRTLLEKLEAE 636 Query: 191 QDLL 194 Q L Sbjct: 637 QKAL 640 >gi|194674605|ref|XP_878269.3| PREDICTED: E1A binding protein p400 isoform 5 [Bos taurus] Length = 2680 Score = 61.5 bits (148), Expect = 6e-08, Method: Composition-based stats. Identities = 22/147 (14%), Positives = 59/147 (40%), Gaps = 19/147 (12%) Query: 49 KEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQK----------AFPQGRTLDK 96 + K++AL ++++K + +++ L L+ + ++ Sbjct: 1437 VQFDSGKLEALAILLQKLKSEGRRVLILSQMVLMLDILEMFLNFHYLTYIRIDENANSEQ 1496 Query: 97 DPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTR 155 ++ +N + +I S G++L + +VF+ + + E Sbjct: 1497 RQELMRSFNRDRRIFCALLSTHSRATGVSLVE-ADAVVFYDHDLNPVMDAKAQEWCD--- 1552 Query: 156 QRQAGFKRAVFVYYLIAQNTIDELVLQ 182 + G ++ V +Y L++ N+I+E +L+ Sbjct: 1553 --RIGRRKDVHIYRLVSGNSIEEKLLK 1577 >gi|189465857|ref|ZP_03014642.1| hypothetical protein BACINT_02219 [Bacteroides intestinalis DSM 17393] gi|189434121|gb|EDV03106.1| hypothetical protein BACINT_02219 [Bacteroides intestinalis DSM 17393] Length = 408 Score = 61.5 bits (148), Expect = 6e-08, Method: Composition-based stats. Identities = 33/185 (17%), Positives = 66/185 (35%), Gaps = 16/185 (8%) Query: 5 HKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIE 64 + L ++ G I A K QL++G V + + +K KA E + + Sbjct: 229 KSMRDNLMVEIDGNAILGDTPAKLLTKLHQLSSGTVIAENG---LHLTFDKSKA-EFVRK 284 Query: 65 KANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLN 124 + + + Y + S+ LQ F + P + + + G+ Sbjct: 285 QFAGKKVALFYVYQSEAELLQSVF---QNWTDSPEV---FQLSTDKVFISQVRRAREGVR 338 Query: 125 LQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRL 184 L + L+FF+L + ++Q R+ + VY+L + I+ +L + Sbjct: 339 L-DTADALIFFNLEFSFLSYEQGRNRLVSKER-----TAPADVYFLCSDCGIESKILDAV 392 Query: 185 RTKST 189 K Sbjct: 393 HGKQD 397 >gi|119193294|ref|XP_001247253.1| hypothetical protein CIMG_01024 [Coccidioides immitis RS] Length = 2097 Score = 61.5 bits (148), Expect = 6e-08, Method: Composition-based stats. Identities = 36/193 (18%), Positives = 68/193 (35%), Gaps = 43/193 (22%) Query: 38 GAVYYDEEKHWKEVHDEKIKALEVIIEKANAAP----IIVAYHFNSDLARLQKAFPQGRT 93 G V + W E KI L +++ + P +++ F + + KA + Sbjct: 1882 GEVPQSSDDSWAEFGGSKIGELVKLLQDTSRIPEDDQVLIFIQFTDLVTAVSKALGKAGI 1941 Query: 94 LD--------KDPCTIQEWNEGKIPL-----LFAHPASCGHGLNLQYGGNILVFFSLWWD 140 ++ ++ G + + A GLNLQ N +VFF Sbjct: 1942 RHITIISNDRSAGKSLADFQNGTEEVKSKALILALGDVTASGLNLQ-AANHIVFFHPLIA 2000 Query: 141 LEEH------QQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRT-------- 186 ++ Q + R R+ G ++ V +Y+ +A T++ + +R R Sbjct: 2001 RSQYDYESGMSQAMGR-----SRRYGQQKHVHIYHFLALKTVEVNIFERRRRECLVKRDK 2055 Query: 187 ------KSTIQDL 193 K+ IQD Sbjct: 2056 IFVSLLKNEIQDA 2068 >gi|6693793|gb|AAF24985.1|AF088884_1 HepA-related protein Harp [Mus musculus] Length = 910 Score = 61.5 bits (148), Expect = 6e-08, Method: Composition-based stats. Identities = 23/154 (14%), Positives = 53/154 (34%), Gaps = 18/154 (11%) Query: 45 EKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQK----------AFPQGRTL 94 + + ++ + +++ +V H L + K R Sbjct: 661 NRTAEAKIPCVVEYILDLLDS-GREKFLVFAHHKVILDAVAKELERKNVQHIRIDGSRPT 719 Query: 95 DKDPCTIQEWNEGK-IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGV 153 Q + K + + GL +++VF L+W+ Q +R+ Sbjct: 720 RARELKCQRFQLSKGHTVALLSIPAANMGLTFST-ADLVVFAELFWNPGVLIQAEDRV-- 776 Query: 154 TRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTK 187 + G +V ++YL+A+ T D+ + ++ K Sbjct: 777 ---HRIGQTNSVSIHYLVAKGTADDYLWPLIQEK 807 >gi|194766057|ref|XP_001965141.1| GF23602 [Drosophila ananassae] gi|190617751|gb|EDV33275.1| GF23602 [Drosophila ananassae] Length = 752 Score = 61.5 bits (148), Expect = 6e-08, Method: Composition-based stats. Identities = 23/143 (16%), Positives = 49/143 (34%), Gaps = 19/143 (13%) Query: 59 LEVIIEKANAAPIIVAYHFNSDLARLQKAFPQ---------GRTLDKDPCTIQE--WNEG 107 L+ ++++ I+ H + + + G+T + Sbjct: 525 LKTLVKE--KMKFIIFAHHRVMMDAISDCLAELKVHYIRIDGQTRSDLRADFVDTFQKNS 582 Query: 108 KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFV 167 + +C G+ L +++F L W+ Q +R + G +AV Sbjct: 583 SCKVALLSLKACNSGITLT-AAEMILFAELDWNPSTLAQA-----ESRAHRIGQTKAVIC 636 Query: 168 YYLIAQNTIDELVLQRLRTKSTI 190 YL+A T D+ + L+ K + Sbjct: 637 RYLMAHGTADDTIWAMLKNKQEV 659 >gi|196044225|ref|ZP_03111461.1| helicase domain protein [Bacillus cereus 03BB108] gi|196024864|gb|EDX63535.1| helicase domain protein [Bacillus cereus 03BB108] Length = 1066 Score = 61.5 bits (148), Expect = 6e-08, Method: Composition-based stats. Identities = 31/155 (20%), Positives = 68/155 (43%), Gaps = 23/155 (14%) Query: 51 VHDEKIKALEVIIEKA-----NAAPIIVAYHFNSDLARLQKAFPQGRTL----------D 95 V ++K + LE + A + I++ L+ L++ + + Sbjct: 465 VVEKKYQELEETLFGASGLLNHDEKILIFTESVDTLSYLEEKLLKRVPKIAKIIGSLSME 524 Query: 96 KDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTR 155 + ++ + + ++ A + G +NLQ+ N ++ + + W+ + +Q + RI Sbjct: 525 QRRKQVEMFRN-ECQIMIA-TDAGGESINLQF-CNQMINYDIPWNPNKLEQRMGRI---- 577 Query: 156 QRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 + G K VFV+ L+AQNT + V+ +L K + Sbjct: 578 -HRIGQKNEVFVFNLVAQNTREGSVMTKLLDKMEL 611 >gi|297607123|ref|NP_001059497.2| Os07g0434500 [Oryza sativa Japonica Group] gi|255677716|dbj|BAF21411.2| Os07g0434500 [Oryza sativa Japonica Group] Length = 909 Score = 61.5 bits (148), Expect = 6e-08, Method: Composition-based stats. Identities = 40/213 (18%), Positives = 75/213 (35%), Gaps = 33/213 (15%) Query: 1 MKQYHKFQRE-----LYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEK 55 ++ Y KF+R LY I ++A + A + K Sbjct: 661 IEAYEKFKRSAVGTALYIHPCLSEISEGDAADRATNL----TDATVDSLIESIIIKDGVK 716 Query: 56 IKALEVIIEKAN--AAPIIVAYHF---NSDLARL---QKAFPQGRTL----------DKD 97 K I+ AN ++ + L RL + + G+ + D++ Sbjct: 717 AKFFFNILSLANSAGEKLLAFSQYILPMKFLERLLVKRLGWHVGKEIFMISGDTSADDRE 776 Query: 98 PCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 Q N +LF +CG G++L G + ++ + + +Q I R Sbjct: 777 VAMDQFNNSADAKVLFGSIKACGEGISL-VGASRVIILDVHLNPSVTRQAIGR-----AF 830 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 + G ++ VFVY L+A ++ + + K I Sbjct: 831 RPGQQKKVFVYRLVAADSPEVKFHETAFKKEVI 863 >gi|194337162|ref|YP_002018956.1| helicase domain protein [Pelodictyon phaeoclathratiforme BU-1] gi|194309639|gb|ACF44339.1| helicase domain protein [Pelodictyon phaeoclathratiforme BU-1] Length = 927 Score = 61.5 bits (148), Expect = 6e-08, Method: Composition-based stats. Identities = 30/143 (20%), Positives = 55/143 (38%), Gaps = 17/143 (11%) Query: 56 IKALEVIIEKANAAPIIVAYHFNSDLA----RLQKAFP-QGRTLDKDP------CTIQEW 104 + L + + I+V + + + + FP QG + + + + Sbjct: 506 LDGLGTLWRQNPDEKIVVFATYLGSVDLIAREINQTFPGQGVVILRGGDHGAKVAAERRF 565 Query: 105 NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA 164 + P + A+ G+NLQ+ IL F L W+ + +Q I RI + G Sbjct: 566 RQKDGPRVLVCTAAGREGINLQFS-RILFNFDLPWNPMDVEQRIGRI-----HRYGQNYT 619 Query: 165 VFVYYLIAQNTIDELVLQRLRTK 187 VY L+ +TI+ + L K Sbjct: 620 AQVYNLVLSDTIEGRIFLMLDEK 642 >gi|307105253|gb|EFN53503.1| hypothetical protein CHLNCDRAFT_136836 [Chlorella variabilis] Length = 445 Score = 61.5 bits (148), Expect = 6e-08, Method: Composition-based stats. Identities = 24/142 (16%), Positives = 50/142 (35%), Gaps = 28/142 (19%) Query: 68 AAPIIVAYHFNSDLARLQKAFPQGRTL---------------------DKDPCTIQEWNE 106 ++V H + L LQ A + + ++ + + Sbjct: 165 GVKVLVFAHHQAVLDGLQAALREEQVAHVRIDGQASAPLAAAASSVLNERRKAAVDTFQR 224 Query: 107 GK-IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 + + G G+ L +VF L+W+ + Q +R + G +R + Sbjct: 225 DRACRAALLSITAAGTGITLTE-AQAVVFVELYWNPGQLVQAEDR-----AHRLGQRRVL 278 Query: 166 FVYYLIAQNTIDELVLQRLRTK 187 V+YL+A T D+ + + + K Sbjct: 279 EVHYLVAPGTADDTIWRLCQHK 300 >gi|224071798|ref|XP_002195016.1| PREDICTED: similar to E1A binding protein p400 [Taeniopygia guttata] Length = 2991 Score = 61.5 bits (148), Expect = 6e-08, Method: Composition-based stats. Identities = 26/171 (15%), Positives = 64/171 (37%), Gaps = 19/171 (11%) Query: 25 SASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLA 82 +A + QL + + + K++AL V+++K + +++ L Sbjct: 1746 AAPHLHQLQQLTTPHLLQFPDLRLVQYDSGKLEALAVLLQKLKSEGRRVLILSQMILMLD 1805 Query: 83 RLQ----------KAFPQGRTLDKDPCTIQEWNEGK-IPLLFAHPASCGHGLNLQYGGNI 131 L+ + ++ ++ +N K I S G+NL + Sbjct: 1806 ILELFLNFHFLTFVRIDEYANQEQRQELMKIFNRDKRIFCAILSSHSRSTGVNLVE-ADT 1864 Query: 132 LVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQ 182 +VF+ + + E + G + + +Y L++ N+++E +L+ Sbjct: 1865 VVFYDNDLNPVMDAKAQEWCD-----RIGRCKDIHIYRLVSGNSVEEKLLK 1910 >gi|149634328|ref|XP_001510861.1| PREDICTED: similar to E1A binding protein p400 [Ornithorhynchus anatinus] Length = 3116 Score = 61.5 bits (148), Expect = 6e-08, Method: Composition-based stats. Identities = 25/167 (14%), Positives = 62/167 (37%), Gaps = 19/167 (11%) Query: 29 TVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQK 86 + Q+ + + + K++AL V+++K + +++ L L+ Sbjct: 1838 LQQLRQITALRLLQFPDLRLVQYDSGKLEALAVLLQKLKSEGRRVLILSQMMLMLDILEM 1897 Query: 87 ----------AFPQGRTLDKDPCTIQEWNEGK-IPLLFAHPASCGHGLNLQYGGNILVFF 135 + ++ ++ +N K I S G+NL + +VF+ Sbjct: 1898 FLNFHYLTYIRVDENANSEQRLELMKSFNRDKRIFCAIISTHSRSTGVNLVE-ADTVVFY 1956 Query: 136 SLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQ 182 + + E + G + + +Y L++ N+I+E +L+ Sbjct: 1957 DNDLNPVMDAKAQEWCE-----RIGRCKDIHIYRLVSGNSIEEKLLK 1998 >gi|297669376|ref|XP_002812875.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1-like isoform 1 [Pongo abelii] gi|297669378|ref|XP_002812876.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1-like isoform 2 [Pongo abelii] gi|297669380|ref|XP_002812877.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1-like isoform 3 [Pongo abelii] Length = 954 Score = 61.5 bits (148), Expect = 6e-08, Method: Composition-based stats. Identities = 30/181 (16%), Positives = 67/181 (37%), Gaps = 22/181 (12%) Query: 22 AFNSASK----TVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHF 77 A ++A+K K Q A+ + + I+ + ++E +V H Sbjct: 676 ALDAAAKEMTTKDKTKQQQKDALILFFNRTAEAKIPSVIEYILDLLES-GREKFLVFAHH 734 Query: 78 NSDLARLQKAF---------PQGRTLDKDPCTI-QEWN-EGKIPLLFAHPASCGHGLNLQ 126 L + + G T + + Q++ + + + GL Sbjct: 735 KVVLDAITQELGRKHVQHIRIDGSTSSAEREDLCQQFQLSERHAVAVLSITAANMGLTF- 793 Query: 127 YGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRT 186 +++VF L+W+ Q +R+ + G +V ++YL+A+ T D+ + ++ Sbjct: 794 SSADLVVFAELFWNPGVLIQAEDRV-----HRIGQTSSVGIHYLVAKGTADDYLWPLIQE 848 Query: 187 K 187 K Sbjct: 849 K 849 >gi|50548151|ref|XP_501545.1| YALI0C07150p [Yarrowia lipolytica] gi|49647412|emb|CAG81848.1| YALI0C07150p [Yarrowia lipolytica] Length = 1756 Score = 61.5 bits (148), Expect = 7e-08, Method: Composition-based stats. Identities = 24/137 (17%), Positives = 50/137 (36%), Gaps = 7/137 (5%) Query: 53 DEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEW-NEGKIPL 111 D IK ++++ +A I++ + L L A + + +P T+ + ++ Sbjct: 1578 DHVIKYIKMLTHRAPGTQIVIFSQWAEILTLLASALTENKIAYAEPKTLMSFLQSEEVTC 1637 Query: 112 LFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLI 171 + GL L + ++ + Q I RI + G + V Sbjct: 1638 FLLNAKFQSTGLTLVNATH-VILCEPILNAALEAQAISRI-----HRMGQTQTTHVTIFT 1691 Query: 172 AQNTIDELVLQRLRTKS 188 +T++E VL+ K Sbjct: 1692 MADTVEEEVLRLAINKR 1708 >gi|126661454|ref|ZP_01732511.1| putative DEAD/H helicase [Cyanothece sp. CCY0110] gi|126617267|gb|EAZ88079.1| putative DEAD/H helicase [Cyanothece sp. CCY0110] Length = 924 Score = 61.5 bits (148), Expect = 7e-08, Method: Composition-based stats. Identities = 33/176 (18%), Positives = 67/176 (38%), Gaps = 30/176 (17%) Query: 53 DEKIKALEVII--EKANAAPIIVAYHFNSDLARLQ-------------------KAFPQG 91 D K+ A I+ E I + + + ++ + + QG Sbjct: 745 DTKLSAYIEILRHELTQRESAITFFQYTDTMDYVRDTLVQLYGNQVACYSGRGGELYEQG 804 Query: 92 R-TLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 + + K + + EG I +L S GLNLQ G +++ +S+ W+ + +Q I R Sbjct: 805 QWRIVKKEQIKRLFKEGVIKVLLC-TKSASEGLNLQTCG-VILMYSMPWNPMQVEQQIGR 862 Query: 151 IGVTRQRQAGFKRAVF-VYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIHV 205 + + G ++ T++ V +RLR + + ++ L+ V Sbjct: 863 LD-----RIGQVYPTIRIHNFYYDGTVEAKVYRRLRDRIQAFETVVGNLQPILAQV 913 >gi|328875307|gb|EGG23672.1| SNF2-related domain-containing protein [Dictyostelium fasciculatum] Length = 1175 Score = 61.5 bits (148), Expect = 7e-08, Method: Composition-based stats. Identities = 25/140 (17%), Positives = 51/140 (36%), Gaps = 7/140 (5%) Query: 47 HWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNE 106 K + K+ L +++ I + ++ L LQ + + + + Sbjct: 957 QPKLIDSSKLDYLIKRLQELEKKGIKLMAMKHAKLNFLQY-HSNMKLKKRAMAILSFQTD 1015 Query: 107 GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVF 166 + + + +G+NL +I+ L + ER + R + G V Sbjct: 1016 SQQHFIVMNTDLAAYGINLTAANHIIFVDQLT------SEGKERQAIKRAHRIGQLNPVS 1069 Query: 167 VYYLIAQNTIDELVLQRLRT 186 V LI NTI++++L L Sbjct: 1070 VEKLIIPNTIEQMILSTLNH 1089 >gi|312213090|emb|CBX93172.1| similar to SNF2 family helicase [Leptosphaeria maculans] Length = 1210 Score = 61.5 bits (148), Expect = 7e-08, Method: Composition-based stats. Identities = 33/154 (21%), Positives = 57/154 (37%), Gaps = 18/154 (11%) Query: 45 EKHWKEVHDEKIKALEV-IIEKANAAPIIVAYHFNSDLARLQKAFP--------QGRTLD 95 E K+ L I++ + IIV Y ++ + + RTL+ Sbjct: 933 ETKIMGTTSAKLTYLLDKIVKHQSEEKIIVFYDGDNAAYYIAQGLEVLHINHRIYARTLE 992 Query: 96 --KDPCTIQEWNE-GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIG 152 K ++ +NE + +L A GLNL +L+ + Q I+R Sbjct: 993 NTKRSEYVRLFNEDPTVRVLLIDVACGALGLNLNVASVVLI-VNPINRPFLEAQAIKR-- 1049 Query: 153 VTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRT 186 + G R V V L+ +NTI+ + R + Sbjct: 1050 ---AHRIGQTREVLVETLVLENTIEHAIFDRAKK 1080 >gi|126433436|ref|YP_001069127.1| helicase domain-containing protein [Mycobacterium sp. JLS] gi|126233236|gb|ABN96636.1| helicase domain protein [Mycobacterium sp. JLS] Length = 1136 Score = 61.5 bits (148), Expect = 7e-08, Method: Composition-based stats. Identities = 27/108 (25%), Positives = 46/108 (42%), Gaps = 7/108 (6%) Query: 84 LQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEE 143 +Q R ++ T + +L A + G GLNLQ +++V + L W+ Sbjct: 523 VQAIHGGVRRRERRMITEEFTKNRDCQILLA-TDAAGEGLNLQ-AAHLMVNYDLPWNPNR 580 Query: 144 HQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQ 191 +Q RI + G + ++ L+A NT + V +RL K Q Sbjct: 581 IEQRFGRI-----HRIGQEEVCRLWNLVASNTREGAVFERLLQKIEEQ 623 >gi|83765202|dbj|BAE55345.1| unnamed protein product [Aspergillus oryzae] Length = 1003 Score = 61.5 bits (148), Expect = 7e-08, Method: Composition-based stats. Identities = 27/155 (17%), Positives = 52/155 (33%), Gaps = 18/155 (11%) Query: 51 VHDEKIKALE-VIIEKANAAPIIVAYHFNSDLARLQKAFPQGRT----------LDKDPC 99 + K++AL + I+ + L + K R + Sbjct: 831 GYSSKMRALISDVQRDIRTTKSIIFSCWTRTLDLIAKHLKASRIEFERIDGKTSTSQRQK 890 Query: 100 TIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQ 158 + ++ +P+L + GLNLQ N + W+ Q I R + Sbjct: 891 ILDRFDGTRTVPVLIMTTGTGAFGLNLQ-SVNRVFIVEPQWNPSVESQAIAR-----AIR 944 Query: 159 AGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDL 193 G ++ V V +N+I+E + + K I + Sbjct: 945 LGQEQQVLVTRYRVENSIEEAMCSQQTHKLKISQM 979 >gi|317038672|ref|XP_001401946.2| SNF2 family helicase [Aspergillus niger CBS 513.88] Length = 1203 Score = 61.5 bits (148), Expect = 7e-08, Method: Composition-based stats. Identities = 27/158 (17%), Positives = 57/158 (36%), Gaps = 20/158 (12%) Query: 49 KEVHDEKIKALEVIIEKANAA-PIIVAYHFNSDLARLQKAFP--------QGRTLDKD-- 97 K+ L + + + II+ Y N+ + + TL Sbjct: 884 VATASAKLTYLLDQVSELHKTEKIIIFYDNNNAAFWIAEGLELLGVDFRIYASTLKPTMR 943 Query: 98 PCTIQEWNEGK-IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 + + E + + +L HGL++ + + + W Q I+R Sbjct: 944 AEYLALFRESEEVRVLLMDLRQASHGLHIANASRVFI-VNPIWQPNVESQAIKR-----A 997 Query: 157 RQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 + G R VFV L+ ++T+++ +L+R K+ + Sbjct: 998 HRIGQTRPVFVETLVLKDTLEDKMLKR--RKAMTDSEI 1033 >gi|134074551|emb|CAK38844.1| unnamed protein product [Aspergillus niger] Length = 1237 Score = 61.5 bits (148), Expect = 7e-08, Method: Composition-based stats. Identities = 27/158 (17%), Positives = 57/158 (36%), Gaps = 20/158 (12%) Query: 49 KEVHDEKIKALEVIIEKANAA-PIIVAYHFNSDLARLQKAFP--------QGRTLDKD-- 97 K+ L + + + II+ Y N+ + + TL Sbjct: 918 VATASAKLTYLLDQVSELHKTEKIIIFYDNNNAAFWIAEGLELLGVDFRIYASTLKPTMR 977 Query: 98 PCTIQEWNEGK-IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 + + E + + +L HGL++ + + + W Q I+R Sbjct: 978 AEYLALFRESEEVRVLLMDLRQASHGLHIANASRVFI-VNPIWQPNVESQAIKR-----A 1031 Query: 157 RQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 + G R VFV L+ ++T+++ +L+R K+ + Sbjct: 1032 HRIGQTRPVFVETLVLKDTLEDKMLKR--RKAMTDSEI 1067 >gi|299744877|ref|XP_001831325.2| DNA repair protein rad8 [Coprinopsis cinerea okayama7#130] gi|298406330|gb|EAU90488.2| DNA repair protein rad8 [Coprinopsis cinerea okayama7#130] Length = 2184 Score = 61.5 bits (148), Expect = 7e-08, Method: Composition-based stats. Identities = 35/187 (18%), Positives = 66/187 (35%), Gaps = 25/187 (13%) Query: 17 GENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHD-------EKIKALEVIIEKA--N 67 + E +A KC N V E E D K++ + +I+ Sbjct: 1983 ADKEECVYAAIGKCKCAARVNNIVKATELGEDDEERDGGGKHFGRKLEKIVDLIKNRIPK 2042 Query: 68 AAPIIVAYHFNSDLARLQKAFP---------QGRTLDKDPCTIQEWNEG-KIPLLFAHPA 117 +++ F + ++ + +G DK ++ + G + +L + Sbjct: 2043 DDRVLLFVQFPDLIQKVGECLKYHGIGYLQIKGGVRDKTNS-LENFKLGSEQRVLLLNVM 2101 Query: 118 -SCGHGLNLQYGGNILVFFSL--WWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQN 174 G NL N ++F S E ++ E V R + G + V ++ I +N Sbjct: 2102 DESASGANLTD-ANHVIFLSPLLTPSNEVYE-ANETQAVGRVVRFGQTKHVHIWKFITKN 2159 Query: 175 TIDELVL 181 TIDE + Sbjct: 2160 TIDEEIY 2166 >gi|196250353|ref|ZP_03149046.1| helicase domain protein [Geobacillus sp. G11MC16] gi|196210242|gb|EDY05008.1| helicase domain protein [Geobacillus sp. G11MC16] Length = 1057 Score = 61.5 bits (148), Expect = 7e-08, Method: Composition-based stats. Identities = 29/134 (21%), Positives = 58/134 (43%), Gaps = 18/134 (13%) Query: 66 ANAAPIIVAYHFNSDLARLQKAFP----------QGRTLDKDPCTIQEWNEGKIPLLFAH 115 A +++ L L++ G ++D+ ++++ + ++ A Sbjct: 476 AQGEKLLIFTESKDTLYYLERKLLAHVPEVAKIVGGFSMDQRRAEVEKFRN-HVQIMLA- 533 Query: 116 PASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNT 175 + G +NLQ+ N ++ + + W+ +Q + RI + G K VFV+ L+A NT Sbjct: 534 TDAGGESINLQF-CNQMINYDIPWNPNRLEQRMGRI-----HRIGQKNEVFVFNLVAGNT 587 Query: 176 IDELVLQRLRTKST 189 + VL RL K Sbjct: 588 REGDVLIRLLEKME 601 >gi|224147596|ref|XP_002336506.1| hypothetical protein POPTRDRAFT_592433 [Populus trichocarpa] gi|222835795|gb|EEE74230.1| hypothetical protein POPTRDRAFT_592433 [Populus trichocarpa] Length = 387 Score = 61.5 bits (148), Expect = 7e-08, Method: Composition-based stats. Identities = 33/182 (18%), Positives = 64/182 (35%), Gaps = 28/182 (15%) Query: 37 NGAVYYDEEKHWKEVHD----EKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAFPQ 90 N AV D + E D K K I+ K+ ++V + + L L++ + Sbjct: 126 NSAVTDDMMDNLLETLDVRDGAKAKFFLNILSLCKSAGEKLLVFSQYLTPLKFLERLVMK 185 Query: 91 GR----------TLDKDPCTIQEW------NEGKIPLLFAHPASCGHGLNLQYGGNILVF 134 + + +EW N + F +CG G++L G + ++ Sbjct: 186 VKGWILGKDIFVISGESSSDHREWSMDRFNNSIDAKVFFGSIKACGEGISL-VGASRIII 244 Query: 135 FSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 + + +Q I R + G + V+ Y L+A ++ +E K I + Sbjct: 245 LDVHLNPSVTRQAIGR-----AFRPGQTKKVYAYRLVAADSPEEEDHTTCFRKEAIAKMW 299 Query: 195 LN 196 Sbjct: 300 FE 301 >gi|221068880|ref|ZP_03544985.1| helicase domain protein [Comamonas testosteroni KF-1] gi|220713903|gb|EED69271.1| helicase domain protein [Comamonas testosteroni KF-1] Length = 929 Score = 61.5 bits (148), Expect = 7e-08, Method: Composition-based stats. Identities = 28/143 (19%), Positives = 52/143 (36%), Gaps = 17/143 (11%) Query: 56 IKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQ-----------GRTLDKDPCTIQEW 104 + L + + I++ + + + + Q G +++ Sbjct: 510 LDGLGHLWRQNANEKIVIFATYLGTVDLIAREIEQAYPGQGVVVLRGGDHGAKLAAERKF 569 Query: 105 NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA 164 P + A+ GLNLQ+ IL F L W+ + +Q I RI + G + Sbjct: 570 RLKDGPRVLVCTAAGREGLNLQF-ARILFNFDLPWNPMDMEQRIGRI-----HRYGQRDT 623 Query: 165 VFVYYLIAQNTIDELVLQRLRTK 187 VY L+ +TI+ + L K Sbjct: 624 AQVYNLVLSDTIEGRIFLLLDEK 646 >gi|169608868|ref|XP_001797853.1| hypothetical protein SNOG_07519 [Phaeosphaeria nodorum SN15] gi|111063865|gb|EAT84985.1| hypothetical protein SNOG_07519 [Phaeosphaeria nodorum SN15] Length = 1274 Score = 61.5 bits (148), Expect = 7e-08, Method: Composition-based stats. Identities = 29/157 (18%), Positives = 55/157 (35%), Gaps = 18/157 (11%) Query: 47 HWKEVHDEKIKALEVIIEKANAA-PIIVAYHFNSDLARLQKAFP--------QGRTLDK- 96 K+ L + A II+ Y ++ + + RTL+ Sbjct: 990 RIIATTSAKLTYLLDKVVAHQATEKIIIFYDGDNAAFYIAQCLEMLYINHRIYARTLNNV 1049 Query: 97 -DPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 + +N + + +L A GLNL +I++ + Q I+R Sbjct: 1050 ARSEYVALFNSDPDVRVLLIDVACGALGLNL-NAASIVLIVNPINRPSIEAQAIKR---- 1104 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQ 191 + G + V V L+ +NTI+ + + + S Q Sbjct: 1105 -AHRIGQDKKVTVETLVLENTIEHAIFKHAKKMSRAQ 1140 >gi|24216735|ref|NP_714216.1| ATP-dependent RNA helicase [Leptospira interrogans serovar Lai str. 56601] gi|24198088|gb|AAN51234.1|AE011558_10 ATP-dependent RNA helicase [Leptospira interrogans serovar Lai str. 56601] Length = 948 Score = 61.5 bits (148), Expect = 7e-08, Method: Composition-based stats. Identities = 41/173 (23%), Positives = 69/173 (39%), Gaps = 24/173 (13%) Query: 45 EKHWKEVHDE-KIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTL--------D 95 K KE K+K + ++K + I+ F + L + D Sbjct: 456 GKKIKEDKKSIKLKETILKLQKEGHSKFIIFTQFRTTQDFLASVLSDFQVTLFHGSLSAD 515 Query: 96 KDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTR 155 I E+ K +L + G G NLQ+ N+L + L W + +Q I RI Sbjct: 516 AKEKAIVEFKT-KTEILIC-TEAGGEGRNLQF-ANVLFNYDLPWSPLKIEQRIGRI---- 568 Query: 156 QRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTI-------QDLLLNALKKE 201 + G K VF++ +++T+ E +L+ L K + D LL A++ E Sbjct: 569 -HRFGQKDNVFIFNFASKDTVAERILEVLTNKIRLFEESIGSSDELLGAIEDE 620 >gi|331284125|ref|NP_056224.3| E1A-binding protein p400 [Homo sapiens] Length = 3123 Score = 61.5 bits (148), Expect = 7e-08, Method: Composition-based stats. Identities = 25/172 (14%), Positives = 66/172 (38%), Gaps = 19/172 (11%) Query: 24 NSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDL 81 ++A + Q + E + K++AL ++++K + +++ L Sbjct: 1832 HAAPYFQQLRQTTAPRLLQFPELRLVQFDSGKLEALAILLQKLKSEGRRVLILSQMILML 1891 Query: 82 ARLQK----------AFPQGRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGN 130 L+ + + ++ ++ +N + +I S G+NL + Sbjct: 1892 DILEMFLNFHYLTYVRIDENASSEQRQELMRSFNRDRRIFCAILSTHSRTTGINLVE-AD 1950 Query: 131 ILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQ 182 +VF+ + + E + G + + +Y L++ N+I+E +L+ Sbjct: 1951 TVVFYDNDLNPVMDAKAQEWCD-----RIGRCKDIHIYRLVSGNSIEEKLLK 1997 >gi|317373565|sp|Q96L91|EP400_HUMAN RecName: Full=E1A-binding protein p400; AltName: Full=CAG repeat protein 32; AltName: Full=Domino homolog; Short=hDomino; AltName: Full=Trinucleotide repeat-containing gene 12 protein; AltName: Full=p400 kDa SWI2/SNF2-related protein Length = 3159 Score = 61.5 bits (148), Expect = 7e-08, Method: Composition-based stats. Identities = 25/172 (14%), Positives = 66/172 (38%), Gaps = 19/172 (11%) Query: 24 NSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDL 81 ++A + Q + E + K++AL ++++K + +++ L Sbjct: 1868 HAAPYFQQLRQTTAPRLLQFPELRLVQFDSGKLEALAILLQKLKSEGRRVLILSQMILML 1927 Query: 82 ARLQK----------AFPQGRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGN 130 L+ + + ++ ++ +N + +I S G+NL + Sbjct: 1928 DILEMFLNFHYLTYVRIDENASSEQRQELMRSFNRDRRIFCAILSTHSRTTGINLVE-AD 1986 Query: 131 ILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQ 182 +VF+ + + E + G + + +Y L++ N+I+E +L+ Sbjct: 1987 TVVFYDNDLNPVMDAKAQEWCD-----RIGRCKDIHIYRLVSGNSIEEKLLK 2033 >gi|297263902|ref|XP_001105690.2| PREDICTED: e1A-binding protein p400-like isoform 2 [Macaca mulatta] Length = 3268 Score = 61.5 bits (148), Expect = 7e-08, Method: Composition-based stats. Identities = 25/172 (14%), Positives = 66/172 (38%), Gaps = 19/172 (11%) Query: 24 NSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDL 81 ++A + Q + E + K++AL ++++K + +++ L Sbjct: 1973 HAAPYFQQLRQTTAPRLLQFPELRLVQFDSGKLEALAILLQKLKSEGRRVLILSQMILML 2032 Query: 82 ARLQK----------AFPQGRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGN 130 L+ + + ++ ++ +N + +I S G+NL + Sbjct: 2033 DILEMFLNFHYLTYVRIDENASSEQRQELMRSFNRDRRIFCAILSTHSRTTGINLVE-AD 2091 Query: 131 ILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQ 182 +VF+ + + E + G + + +Y L++ N+I+E +L+ Sbjct: 2092 TVVFYDNDLNPVMDAKAQEWCD-----RIGRCKDIHIYRLVSGNSIEEKLLK 2138 >gi|168270576|dbj|BAG10081.1| E1A binding protein p400 [synthetic construct] Length = 3043 Score = 61.5 bits (148), Expect = 7e-08, Method: Composition-based stats. Identities = 25/172 (14%), Positives = 66/172 (38%), Gaps = 19/172 (11%) Query: 24 NSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDL 81 ++A + Q + E + K++AL ++++K + +++ L Sbjct: 1751 HAAPYFQQLRQTTAPRLLQFPELRLVQFDSGKLEALAILLQKLKSEGRRVLILSQMILML 1810 Query: 82 ARLQK----------AFPQGRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGN 130 L+ + + ++ ++ +N + +I S G+NL + Sbjct: 1811 DILEMFLNFHYLTYVRIDENASSEQRQELMRSFNRDRRIFCAILSTHSRTTGINLVE-AD 1869 Query: 131 ILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQ 182 +VF+ + + E + G + + +Y L++ N+I+E +L+ Sbjct: 1870 TVVFYDNDLNPVMDAKAQEWCD-----RIGRCKDIHIYRLVSGNSIEEKLLK 1916 >gi|119618942|gb|EAW98536.1| E1A binding protein p400, isoform CRA_c [Homo sapiens] Length = 2066 Score = 61.5 bits (148), Expect = 7e-08, Method: Composition-based stats. Identities = 25/172 (14%), Positives = 66/172 (38%), Gaps = 19/172 (11%) Query: 24 NSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDL 81 ++A + Q + E + K++AL ++++K + +++ L Sbjct: 1832 HAAPYFQQLRQTTAPRLLQFPELRLVQFDSGKLEALAILLQKLKSEGRRVLILSQMILML 1891 Query: 82 ARLQK----------AFPQGRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGN 130 L+ + + ++ ++ +N + +I S G+NL + Sbjct: 1892 DILEMFLNFHYLTYVRIDENASSEQRQELMRSFNRDRRIFCAILSTHSRTTGINLVE-AD 1950 Query: 131 ILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQ 182 +VF+ + + E + G + + +Y L++ N+I+E +L+ Sbjct: 1951 TVVFYDNDLNPVMDAKAQEWCD-----RIGRCKDIHIYRLVSGNSIEEKLLK 1997 >gi|119618940|gb|EAW98534.1| E1A binding protein p400, isoform CRA_a [Homo sapiens] Length = 3081 Score = 61.5 bits (148), Expect = 7e-08, Method: Composition-based stats. Identities = 25/172 (14%), Positives = 66/172 (38%), Gaps = 19/172 (11%) Query: 24 NSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDL 81 ++A + Q + E + K++AL ++++K + +++ L Sbjct: 1785 HAAPYFQQLRQTTAPRLLQFPELRLVQFDSGKLEALAILLQKLKSEGRRVLILSQMILML 1844 Query: 82 ARLQK----------AFPQGRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGN 130 L+ + + ++ ++ +N + +I S G+NL + Sbjct: 1845 DILEMFLNFHYLTYVRIDENASSEQRQELMRSFNRDRRIFCAILSTHSRTTGINLVE-AD 1903 Query: 131 ILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQ 182 +VF+ + + E + G + + +Y L++ N+I+E +L+ Sbjct: 1904 TVVFYDNDLNPVMDAKAQEWCD-----RIGRCKDIHIYRLVSGNSIEEKLLK 1950 >gi|15529034|gb|AAK97789.1| p400 SWI2/SNF2-related protein [Homo sapiens] Length = 3124 Score = 61.5 bits (148), Expect = 7e-08, Method: Composition-based stats. Identities = 25/172 (14%), Positives = 66/172 (38%), Gaps = 19/172 (11%) Query: 24 NSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDL 81 ++A + Q + E + K++AL ++++K + +++ L Sbjct: 1832 HAAPYFQQLRQTTAPRLLQFPELRLVQFDSGKLEALAILLQKLKSEGRRVLILSQMILML 1891 Query: 82 ARLQK----------AFPQGRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGN 130 L+ + + ++ ++ +N + +I S G+NL + Sbjct: 1892 DILEMFLNFHYLTYVRIDENASSEQRQELMRSFNRDRRIFCAILSTHSRTTGINLVE-AD 1950 Query: 131 ILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQ 182 +VF+ + + E + G + + +Y L++ N+I+E +L+ Sbjct: 1951 TVVFYDNDLNPVMDAKAQEWCD-----RIGRCKDIHIYRLVSGNSIEEKLLK 1997 >gi|45659042|ref|YP_003128.1| ATP-dependent RNA helicase [Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130] gi|45602288|gb|AAS71765.1| ATP-dependent RNA helicase [Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130] Length = 948 Score = 61.5 bits (148), Expect = 7e-08, Method: Composition-based stats. Identities = 41/173 (23%), Positives = 69/173 (39%), Gaps = 24/173 (13%) Query: 45 EKHWKEVHDE-KIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTL--------D 95 K KE K+K + ++K + I+ F + L + D Sbjct: 456 GKKIKEDKKSIKLKETILKLQKEGHSKFIIFTQFRTTQDFLASVLSDFQVTLFHGSLSAD 515 Query: 96 KDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTR 155 I E+ K +L + G G NLQ+ N+L + L W + +Q I RI Sbjct: 516 AKEKAIVEFKT-KTEILIC-TEAGGEGRNLQF-ANVLFNYDLPWSPLKIEQRIGRI---- 568 Query: 156 QRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTI-------QDLLLNALKKE 201 + G K VF++ +++T+ E +L+ L K + D LL A++ E Sbjct: 569 -HRFGQKDNVFIFNFASKDTVAERILEVLTNKIRLFEESIGSSDELLGAIEDE 620 >gi|225021083|ref|ZP_03710275.1| hypothetical protein CORMATOL_01095 [Corynebacterium matruchotii ATCC 33806] gi|224946223|gb|EEG27432.1| hypothetical protein CORMATOL_01095 [Corynebacterium matruchotii ATCC 33806] Length = 1167 Score = 61.5 bits (148), Expect = 7e-08, Method: Composition-based stats. Identities = 38/200 (19%), Positives = 66/200 (33%), Gaps = 31/200 (15%) Query: 13 CDLQGENIEAFNSASKTVKCLQLANGAVYYD-----EEKHWKEVHDEKIKALEVIIEK-- 65 +L+ + E + A+ QL + D + + D K L I+E Sbjct: 430 AELEQQVDEVVDRATAAQDQAQLTHEITVLDGLIATARRVRNQDEDRKWVELRKILESKV 489 Query: 66 -----ANAAPIIVAYHFNSDLARLQKAFPQ-------------GRTLDKDPCTIQEWNEG 107 II+ L L+ G +++ Sbjct: 490 LTGTNGENRKIIIFTEHRDTLTYLEDKITTQLGSTDAVVTIHGGTPRHLRQAIREQFTHD 549 Query: 108 KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFV 167 L+ + G GLNLQ +++V + L W+ +Q RI + G + + Sbjct: 550 PRTLVLLATDAAGEGLNLQR-AHLMVNYDLPWNPNRIEQRFGRI-----HRIGQREVCHL 603 Query: 168 YYLIAQNTIDELVLQRLRTK 187 + L+A NT + V RL K Sbjct: 604 WNLVAHNTREGDVFNRLLEK 623 >gi|239610143|gb|EEQ87130.1| SNF2-family ATP dependent chromatin remodeling factor snf21 [Ajellomyces dermatitidis ER-3] Length = 1385 Score = 61.5 bits (148), Expect = 7e-08, Method: Composition-based stats. Identities = 14/68 (20%), Positives = 30/68 (44%), Gaps = 5/68 (7%) Query: 132 LVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQ 191 ++ + W+ + Q R + G K V + LI N+++E +L+ + K + Sbjct: 898 VIIYDSDWNPHQDLQA-----QDRAHRIGQKNEVRILRLITSNSVEERILEAAQFKLDMD 952 Query: 192 DLLLNALK 199 ++ A K Sbjct: 953 GKVIQAGK 960 >gi|171679323|ref|XP_001904608.1| hypothetical protein [Podospora anserina S mat+] gi|170939287|emb|CAP64515.1| unnamed protein product [Podospora anserina S mat+] Length = 997 Score = 61.5 bits (148), Expect = 8e-08, Method: Composition-based stats. Identities = 26/167 (15%), Positives = 53/167 (31%), Gaps = 19/167 (11%) Query: 38 GAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRT---- 93 G + K + + + L+ I + I+ + L + + R Sbjct: 810 GNTSHTTPKIPTQYPSKLLALLKDI-SMHLSQKSIIFSSWKKTLNLISELLTSYRIPFYC 868 Query: 94 ------LDKDPCTIQEWNEGK-IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 L + ++++ +L + GLNL + + W+ Q Sbjct: 869 IHGSLSLGERIRILKDFRSSSGANVLLMTLGTGAVGLNLAV-ASRIYLMEPQWNPSVELQ 927 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDE-LVLQRLRTKSTIQD 192 I R + G V + I ++TI++ VL R K + Sbjct: 928 AIGR-----ALRLGQTEQVAIVRYIVKHTIEDSNVLSRQEAKLQLAS 969 >gi|171681303|ref|XP_001905595.1| hypothetical protein [Podospora anserina S mat+] gi|170940610|emb|CAP65838.1| unnamed protein product [Podospora anserina S mat+] Length = 213 Score = 61.1 bits (147), Expect = 8e-08, Method: Composition-based stats. Identities = 20/119 (16%), Positives = 41/119 (34%), Gaps = 15/119 (12%) Query: 70 PIIVAYHFNSDLARLQKAFPQ----------GRTLDKDPCTIQEWNEGKIPLLFAHPASC 119 P IV + L ++ + R+ + ++ ++ +P+L + Sbjct: 16 PSIVFSFWMKSLDLVENLLKKHDIAFRRVDGSRSKNDRRASLHDFRTKDVPVLLMTFGTG 75 Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDE 178 GLN + W+ Q I R+ + G R V V + + +I+E Sbjct: 76 SMGLNDLNVARRVHILEPQWNPSVENQAIGRVS-----RFGQTREVTVIRYVMKKSIEE 129 >gi|73998078|ref|XP_859390.1| PREDICTED: similar to helicase, lymphoid-specific isoform 7 [Canis familiaris] Length = 812 Score = 61.1 bits (147), Expect = 8e-08, Method: Composition-based stats. Identities = 20/149 (13%), Positives = 45/149 (30%), Gaps = 44/149 (29%) Query: 58 ALEVIIEKANAAPIIVAYHFNSDLARLQK----------AFPQGRTLDKDPCTIQEWN-E 106 L + KA +++ L L + + + +N + Sbjct: 606 MLPEL--KARGHKVLLFSQMTRMLDILMDYCHFRNFNFSRLDGSMSYSEREKNMHSFNTD 663 Query: 107 GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVF 166 + + + + Q +R + G + V Sbjct: 664 PDVFIFL--------------------------NPQSDLQAQDRC-----HRIGQTKPVV 692 Query: 167 VYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 VY L+ NTID+ +++R K ++ L++ Sbjct: 693 VYRLVTANTIDQKIVERAAAKRKLEKLII 721 >gi|308804708|ref|XP_003079666.1| SNF2 domain-containing protein / helicase domain-containing prote (ISS) [Ostreococcus tauri] gi|116058122|emb|CAL53311.1| SNF2 domain-containing protein / helicase domain-containing prote (ISS) [Ostreococcus tauri] Length = 1574 Score = 61.1 bits (147), Expect = 8e-08, Method: Composition-based stats. Identities = 25/146 (17%), Positives = 57/146 (39%), Gaps = 14/146 (9%) Query: 45 EKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFP--QGRTLDKDP---- 98 W + ++ + I++ +I+ ++ L ++KA Q R + + Sbjct: 1371 SGSWGTKIEAIVRRVRFILDTDERTKLIIFSEWDDVLKVVEKAIAANQVRAMRAESGPKF 1430 Query: 99 -CTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 + + +G + +L GLNL ++L+ D Q I+R+ Sbjct: 1431 RAAVDRFKHDGTVSVLLLPMKRGAQGLNLTEAQHVLLL-EPVLDPGMEAQAIKRVD---- 1485 Query: 157 RQAGFKRAVFVYYLIAQNTIDELVLQ 182 + G R V+ + ++T++E V + Sbjct: 1486 -RIGQTRPTCVHRFVIRDTVEENVQK 1510 >gi|26335537|dbj|BAC31469.1| unnamed protein product [Mus musculus] Length = 263 Score = 61.1 bits (147), Expect = 8e-08, Method: Composition-based stats. Identities = 23/154 (14%), Positives = 55/154 (35%), Gaps = 18/154 (11%) Query: 45 EKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFP---------QGRT-- 93 + + ++ + +++ +V H L + K G T Sbjct: 14 NRTAEAKIPCVVEYILDLLDS-GRERFLVFAHHKVILDAVAKELERKNVQHIRIDGSTPS 72 Query: 94 LDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGV 153 D++ + + + GL +++VF L+W+ Q +R+ Sbjct: 73 ADREAQCQRFQLSKGHTVALLSITAANMGLTFST-ADLVVFAELFWNPGVLIQAEDRV-- 129 Query: 154 TRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTK 187 + G +V ++YL+A+ T D+ + ++ K Sbjct: 130 ---HRIGQTNSVSIHYLVAKGTADDYLWPLIQEK 160 >gi|85099203|ref|XP_960732.1| hypothetical protein NCU03652 [Neurospora crassa OR74A] gi|16944466|emb|CAC18163.2| conserved hypothetical protein [Neurospora crassa] gi|28922252|gb|EAA31496.1| predicted protein [Neurospora crassa OR74A] Length = 1541 Score = 61.1 bits (147), Expect = 8e-08, Method: Composition-based stats. Identities = 27/159 (16%), Positives = 56/159 (35%), Gaps = 14/159 (8%) Query: 31 KCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQ 90 K ++ N + + H+ D ++ L + + A IV + L L +AF + Sbjct: 1240 KLAEIQN--IDLENGPHYTTKVDTLLRHLLWLRQSDPGAKSIVFSQYQDFLHVLAQAFER 1297 Query: 91 -----GRTLDKDPCTIQEW-NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEH 144 ++ + + I + H + GLNL + + + Sbjct: 1298 YHIGYSSFYRSAVSSVASFREDPSIEVFLLHARAHASGLNLVNASH-VFLCEPLLNTALE 1356 Query: 145 QQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQR 183 Q I R+ + G K+ V+ I T+++ V + Sbjct: 1357 LQAIARVD-----RIGQKQETTVWLYIVDGTVEQNVYEL 1390 >gi|28603792|ref|NP_788839.1| SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1 [Bos taurus] gi|60390964|sp|Q9TTA5|SMAL1_BOVIN RecName: Full=SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1; AltName: Full=HepA-related protein; AltName: Full=Sucrose nonfermenting protein 2-like 1 gi|6651385|gb|AAF22285.1|AF173643_1 DNA-dependent ATPase A [Bos taurus] gi|296490282|gb|DAA32395.1| SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1 [Bos taurus] Length = 941 Score = 61.1 bits (147), Expect = 8e-08, Method: Composition-based stats. Identities = 23/142 (16%), Positives = 52/142 (36%), Gaps = 17/142 (11%) Query: 56 IKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLD----------KDPCTIQEWN 105 I+ + ++E +V H L + K + R + ++ Sbjct: 711 IEYILDLLES-GREKFLVFAHHKVVLDAITKELERKRVQHIRIDGSTSSADRETSASSFS 769 Query: 106 EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 + + GL +++VF L+W+ Q +R+ + G +V Sbjct: 770 CPRALRGVLSITAANMGLTF-SSADLVVFGELFWNPGVLMQAEDRV-----HRIGQLSSV 823 Query: 166 FVYYLIAQNTIDELVLQRLRTK 187 ++YL+A+ T D+ + ++ K Sbjct: 824 SIHYLVARGTADDYLWPLIQEK 845 >gi|241855293|ref|XP_002416013.1| conserved hypothetical protein [Ixodes scapularis] gi|215510227|gb|EEC19680.1| conserved hypothetical protein [Ixodes scapularis] Length = 675 Score = 61.1 bits (147), Expect = 8e-08, Method: Composition-based stats. Identities = 24/143 (16%), Positives = 52/143 (36%), Gaps = 19/143 (13%) Query: 59 LEVIIEKANAAPIIVAYHFNSDLARLQKAFPQ---------GRTLDKDPCTI--QEWNEG 107 LE ++E + H + + + + G+T + + + Sbjct: 492 LEDLLES--DQKFLCFAHHQMVIDAVCELLDKKSCSHIRIDGKTSPELRKMLCDKFQYND 549 Query: 108 KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFV 167 + + G+ L +++VF L+W+ Q +R+ + G + V V Sbjct: 550 MCKVAVLSITAANAGITL-SSASLVVFAELFWNPGILTQAEDRV-----HRIGQQNCVMV 603 Query: 168 YYLIAQNTIDELVLQRLRTKSTI 190 YL+A+ T D+ + +R K Sbjct: 604 QYLVAKGTADDYIWPLVRNKLDT 626 >gi|222636933|gb|EEE67065.1| hypothetical protein OsJ_24029 [Oryza sativa Japonica Group] Length = 969 Score = 61.1 bits (147), Expect = 8e-08, Method: Composition-based stats. Identities = 40/213 (18%), Positives = 75/213 (35%), Gaps = 33/213 (15%) Query: 1 MKQYHKFQRE-----LYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEK 55 ++ Y KF+R LY I ++A + A + K Sbjct: 718 IEAYEKFKRSAVGTALYIHPCLSEISEGDAADRATNL----TDATVDSLIESIIIKDGVK 773 Query: 56 IKALEVIIEKAN--AAPIIVAYHF---NSDLARL---QKAFPQGRTL----------DKD 97 K I+ AN ++ + L RL + + G+ + D++ Sbjct: 774 AKFFFNILSLANSAGEKLLAFSQYILPMKFLERLLVKRLGWHVGKEIFMISGDTSADDRE 833 Query: 98 PCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 Q N +LF +CG G++L G + ++ + + +Q I R Sbjct: 834 VAMDQFNNSADAKVLFGSIKACGEGISL-VGASRVIILDVHLNPSVTRQAIGR-----AF 887 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 + G ++ VFVY L+A ++ + + K I Sbjct: 888 RPGQQKKVFVYRLVAADSPEVKFHETAFKKEVI 920 >gi|310796548|gb|EFQ32009.1| SNF2 family domain-containing protein [Glomerella graminicola M1.001] Length = 968 Score = 61.1 bits (147), Expect = 8e-08, Method: Composition-based stats. Identities = 25/153 (16%), Positives = 53/153 (34%), Gaps = 21/153 (13%) Query: 52 HDEKIKALEVII----EKANAAPIIVAYHF---------NSDLARLQKAFPQGRTLDKDP 98 K+ + II E+A II+ F +L + + G+ + Sbjct: 770 PGTKLTVAKEIILQWQEEAPNDKIIIFVEFIKTAVLMGIMLNLEDIPFVYLNGKLTSTEK 829 Query: 99 -CTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 + + ++ +L A G LNL N ++ WW+ +Q R+ Sbjct: 830 LKAVDTFKTNPEVKILIASMKVGGQALNLTC-ANRVIQVDSWWNEAAGEQANGRVN---- 884 Query: 157 RQAGFKRAVFVYYLIAQNTIDELVLQRLRTKST 189 + G + + + T+D+ + +K+ Sbjct: 885 -RMGQLKPSHAVVIKVRGTVDDYITDLQDSKTK 916 >gi|159466410|ref|XP_001691402.1| SNF2 superfamily protein [Chlamydomonas reinhardtii] gi|158279374|gb|EDP05135.1| SNF2 superfamily protein [Chlamydomonas reinhardtii] Length = 1610 Score = 61.1 bits (147), Expect = 8e-08, Method: Composition-based stats. Identities = 22/129 (17%), Positives = 43/129 (33%), Gaps = 14/129 (10%) Query: 72 IVAYHFNSDLARLQKAF----PQGRTLDKDPCTIQEWN----EGKIPLLFAHPASCGHGL 123 +V + L +++ TL+ N + + GL Sbjct: 1197 LVFSQWADALQIVERGLRANDIGCVTLESGRRMRPAMNAFLHDPACRVFLLSLRQGAAGL 1256 Query: 124 NLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQR 183 L N + D QQ + R+ + G R V V L+ ++++ V+ Sbjct: 1257 TLVR-ANHVFLLEPALDPAIEQQAVARV-----HRIGQTRDVSVTRLLVDDSVERHVMAM 1310 Query: 184 LRTKSTIQD 192 L+ T++D Sbjct: 1311 LKAGRTLRD 1319 >gi|84997577|ref|XP_953510.1| DEAD-box family helicase [Theileria annulata strain Ankara] gi|65304506|emb|CAI76885.1| DEAD-box family helicase, putative [Theileria annulata] Length = 927 Score = 61.1 bits (147), Expect = 8e-08, Method: Composition-based stats. Identities = 39/194 (20%), Positives = 69/194 (35%), Gaps = 29/194 (14%) Query: 26 ASKTVKCLQLANGA-----------VYYDEEKHWKEVHDEKI-KALEVIIEKAN-AAPII 72 S K QL + + + K H + A+E ++ I Sbjct: 714 LSLMSKLFQLTGESKTKGVCKYIEEILENNNKFIIFAHHMFMMDAIEDTLKSKKVGYIRI 773 Query: 73 VAYHFNSDLARLQKAFPQGRTLDKDPCTIQEW--------NEGKIPLLFAHPASCGHGLN 124 +D ARL F ++ + N G + + SCG GLN Sbjct: 774 DGSTKINDRARLVNLFQNNSASNESKSDAKANKVEGDDSPNNG-VRVALLSLTSCGVGLN 832 Query: 125 LQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFK-RAVFVYYLIAQNTIDELVLQR 183 L + ++F L+W Q +R+ + G K + + YLIAQN+++E++ + Sbjct: 833 LT-SSSTVIFAELYWVPGVLLQAEDRV-----HRIGTKFNKININYLIAQNSVEEVMWKV 886 Query: 184 LRTKSTIQDLLLNA 197 + K L+ Sbjct: 887 INKKYKTVTSTLDG 900 >gi|221113471|ref|XP_002160604.1| PREDICTED: similar to predicted protein, partial [Hydra magnipapillata] gi|221136070|ref|XP_002171130.1| PREDICTED: similar to predicted protein, partial [Hydra magnipapillata] Length = 105 Score = 61.1 bits (147), Expect = 9e-08, Method: Composition-based stats. Identities = 19/76 (25%), Positives = 35/76 (46%), Gaps = 6/76 (7%) Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 G G+NL N +V + ++ +Q +R + G R V VY I ++T++E Sbjct: 1 GLGINLTT-ANTVVLHDIDFNPYNDKQAEDRC-----HRLGQTRQVTVYKFIGKDTVEEN 54 Query: 180 VLQRLRTKSTIQDLLL 195 +L K ++ L+ Sbjct: 55 ILTCGERKLQLEKELV 70 >gi|291299114|ref|YP_003510392.1| helicase domain-containing protein [Stackebrandtia nassauensis DSM 44728] gi|290568334|gb|ADD41299.1| helicase domain protein [Stackebrandtia nassauensis DSM 44728] Length = 1137 Score = 61.1 bits (147), Expect = 9e-08, Method: Composition-based stats. Identities = 32/161 (19%), Positives = 59/161 (36%), Gaps = 29/161 (18%) Query: 45 EKHWKEVHDEKIKALEV--IIEKANAAP--IIVAYHFNSDLARLQKAFP----------- 89 ++ W E+ L+ +I + +P I+ L L+ Sbjct: 470 DRKWTELST----ILQDNALITDKSGSPRKFIIFTEHRDTLEYLRGRITSLLGRPDAVRA 525 Query: 90 --QGRTLDKDPCTIQEW-NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 G + +E+ +L A + G GLNLQ +++V + L W+ +Q Sbjct: 526 IHGGVRRGERRQITEEFTQNSDCQILIA-TDAAGEGLNLQ-AAHLMVNYDLPWNPNRIEQ 583 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTK 187 RI + G + ++ ++A NT + V RL K Sbjct: 584 RFGRI-----HRIGQEEVCRLWNIVASNTREGEVFTRLLEK 619 >gi|147678776|ref|YP_001212991.1| DNA/RNA helicase [Pelotomaculum thermopropionicum SI] gi|146274873|dbj|BAF60622.1| hypothetical DNA/RNA helicases [Pelotomaculum thermopropionicum SI] Length = 1109 Score = 61.1 bits (147), Expect = 9e-08, Method: Composition-based stats. Identities = 29/154 (18%), Positives = 63/154 (40%), Gaps = 23/154 (14%) Query: 49 KEVHDEKIKALEVIIE----KANAAPIIVAYHFNSDLARLQKAFPQ-----------GRT 93 K+ + K+ L +I+ + +++ L L + + G Sbjct: 458 KQEIETKLNRLREVIDDEKLRETGTKLLIFTESRDTLEYLAEKIGRKWGYTVTIVHGGMG 517 Query: 94 LDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGV 153 +D E+ + ++ A + G G+NLQ+ ++V + + W+ +Q + RI Sbjct: 518 MDARIRAEYEFKN-RAQVMVA-TEAAGEGINLQF-CWLMVNYDIPWNPNRLEQRMGRI-- 572 Query: 154 TRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTK 187 + G + V +Y L+A +T + +L+ L K Sbjct: 573 ---HRYGQRNEVHIYNLVAADTREGRILETLFEK 603 >gi|37522310|ref|NP_925687.1| hypothetical protein gll2741 [Gloeobacter violaceus PCC 7421] gi|35213310|dbj|BAC90682.1| gll2741 [Gloeobacter violaceus PCC 7421] Length = 1066 Score = 61.1 bits (147), Expect = 9e-08, Method: Composition-based stats. Identities = 36/187 (19%), Positives = 65/187 (34%), Gaps = 24/187 (12%) Query: 19 NIEAFNSASK-TVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHF 77 + F+S + + LA A+ D + D+ I+ ++ I + A ++V + Sbjct: 463 EVAKFSSLVEALDNLVHLAGEALEQDPK------LDQFIQVIQAIRAEEPRANVLVYTEY 516 Query: 78 NSDLARLQKAFPQGRTLDK-----------DPCTIQEWNEGKIPLLFAHPASCGHGLNLQ 126 +A Q D T + + L+ + GLNL Sbjct: 517 IDTQQAAVRALKQAGFRDVLTMSGEDDEKMRTGTTERFRSED-GLILVSTDAAAEGLNLH 575 Query: 127 YGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRT 186 + L+ L ++ +Q RI + G + V YL + T +E +L RL Sbjct: 576 QRCHQLIHLELPFNPNRLEQRNGRID-----RYGQQHDPIVRYLFLRGTFEERILLRLIV 630 Query: 187 KSTIQDL 193 K Q Sbjct: 631 KYEKQRA 637 >gi|114631885|ref|XP_001150802.1| PREDICTED: helicase, lymphoid-specific isoform 3 [Pan troglodytes] Length = 813 Score = 61.1 bits (147), Expect = 9e-08, Method: Composition-based stats. Identities = 20/159 (12%), Positives = 50/159 (31%), Gaps = 44/159 (27%) Query: 50 EVHDEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQK----------AFPQGRTLDKD 97 + K L+ ++ + +++ S L L + + Sbjct: 595 VTNSGKFLILDRMLPELKKRGHKVLLFSQMTSMLDILMDYCHLRDFNFSRLDGSMSYSER 654 Query: 98 PCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 + +N + ++ + + + Q +R Sbjct: 655 EKNMHSFNTDPEVFIFL--------------------------NPQSDLQAQDRC----- 683 Query: 157 RQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 + G + V VY L+ NTID+ +++R K ++ L++ Sbjct: 684 HRIGQTKPVVVYRLVTANTIDQKIVERAAAKRKLEKLII 722 >gi|242015993|ref|XP_002428623.1| snf2 histone linker PHD ring helicase, putative [Pediculus humanus corporis] gi|212513286|gb|EEB15885.1| snf2 histone linker PHD ring helicase, putative [Pediculus humanus corporis] Length = 1709 Score = 61.1 bits (147), Expect = 9e-08, Method: Composition-based stats. Identities = 23/156 (14%), Positives = 53/156 (33%), Gaps = 18/156 (11%) Query: 43 DEEKHWKEVHDEKIK----ALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD- 97 D H K+ +L + + +++ + L L+ A Q + Sbjct: 1247 DSGIKVIGDHSTKVDGIVRSLLSLKREDENVKVLIFSTWGVVLKILEVALTQNNISFRRM 1306 Query: 98 -----PCTIQEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 ++++ + K+ L + GLNL N + + E Q + R Sbjct: 1307 PGHNYQIHLKQFKDPNLKVTALLLPISWGSKGLNLTE-ANHVFLVEPIMNPAEELQAVGR 1365 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRT 186 + + G + V+ + + TI+E + + + Sbjct: 1366 V-----HRIGQTKKTTVHKFLIKGTIEEKINDAVSS 1396 >gi|302134007|ref|ZP_07259997.1| SNF2-related:helicase, C-terminal [Pseudomonas syringae pv. tomato NCPPB 1108] Length = 89 Score = 61.1 bits (147), Expect = 9e-08, Method: Composition-based stats. Identities = 22/79 (27%), Positives = 34/79 (43%), Gaps = 6/79 (7%) Query: 118 SCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 + G G NL N + F L W Q +R + G R V V +A++TID Sbjct: 2 AAGTGYNLT-AANYVFFLGLPWTPGLQDQAEDR-----AYRNGQLRMVVVKIPLAEDTID 55 Query: 178 ELVLQRLRTKSTIQDLLLN 196 + + Q L K + L++ Sbjct: 56 QQLWQMLMDKRALASDLID 74 >gi|114583218|ref|XP_001152878.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent regulator of chromatin a-like 1 isoform 2 [Pan troglodytes] Length = 556 Score = 61.1 bits (147), Expect = 9e-08, Method: Composition-based stats. Identities = 30/181 (16%), Positives = 67/181 (37%), Gaps = 22/181 (12%) Query: 22 AFNSASK----TVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHF 77 A ++A+K K Q A+ + + I+ + ++E +V H Sbjct: 278 ALDAAAKEMTTKDKTKQQQKDALILFFNRTAEAKIPSVIEYILDLLES-GREKFLVFAHH 336 Query: 78 NSDLARLQKAFP---------QGRTLDKDPCTI-QEWN-EGKIPLLFAHPASCGHGLNLQ 126 L + + G T + + Q++ + + + GL Sbjct: 337 KVVLDAITQELERKHVQHIRIDGSTSSAEREDLCQQFQLSERHAVAVLSITAANMGLTF- 395 Query: 127 YGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRT 186 +++VF L+W+ Q +R+ + G +V ++YL+A+ T D+ + ++ Sbjct: 396 SSADLVVFAELFWNPGVLIQAEDRV-----HRIGQTSSVGIHYLVAKGTADDYLWPLIQE 450 Query: 187 K 187 K Sbjct: 451 K 451 >gi|218200743|gb|EEC83170.1| hypothetical protein OsI_28396 [Oryza sativa Indica Group] Length = 848 Score = 61.1 bits (147), Expect = 9e-08, Method: Composition-based stats. Identities = 36/212 (16%), Positives = 79/212 (37%), Gaps = 35/212 (16%) Query: 8 QRELYCDLQGENI----EAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDE-------KI 56 Q+++ C L+ ++ A +A CL + A D + + + K Sbjct: 535 QKDILCKLEEDHEMLKTSAVGAALYVHPCLSEISEANAVDRDDRVDSLVNSINLGDGVKA 594 Query: 57 KALEVIIEKAN--AAPIIVAYHFNSDLARLQKAFPQ------GRTL---------DKDPC 99 + I+ AN ++ + + L++ + G+ + + Sbjct: 595 RFFLNILALANSAGEKLVAFSQYTLPMKFLERLLVKEMGWYVGKEIFVINGDTSMEDGQL 654 Query: 100 TIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQ 158 + ++N +LF + G G++L G + +V + +L + R + + Sbjct: 655 AMDQFNGSADAKVLFGSIKAFGEGISL-VGASRIVILDIHLNLS-----VTRQAIGSTFR 708 Query: 159 AGFKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 G K+ VFVY L+A ++ +E + K I Sbjct: 709 PGQKKKVFVYRLVAADSPEEKTHETAFNKEVI 740 >gi|238482351|ref|XP_002372414.1| helicase, putative [Aspergillus flavus NRRL3357] gi|220700464|gb|EED56802.1| helicase, putative [Aspergillus flavus NRRL3357] Length = 941 Score = 60.7 bits (146), Expect = 1e-07, Method: Composition-based stats. Identities = 27/155 (17%), Positives = 52/155 (33%), Gaps = 18/155 (11%) Query: 51 VHDEKIKALE-VIIEKANAAPIIVAYHFNSDLARLQKAFPQGRT----------LDKDPC 99 + K++AL + I+ + L + K R + Sbjct: 769 GYSSKMRALISDVQRDIRTTKSIIFSCWTRTLDLIAKHLKASRIEFERIDGKTSTSQRQK 828 Query: 100 TIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQ 158 + ++ +P+L + GLNLQ N + W+ Q I R + Sbjct: 829 ILDRFDGTRTVPVLIMTTGTGAFGLNLQ-SVNRVFIVEPQWNPSVESQAIAR-----AIR 882 Query: 159 AGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDL 193 G ++ V V +N+I+E + + K I + Sbjct: 883 LGQEQQVLVTRYRVENSIEEAMCSQQTHKLKISQM 917 >gi|218199507|gb|EEC81934.1| hypothetical protein OsI_25800 [Oryza sativa Indica Group] Length = 969 Score = 60.7 bits (146), Expect = 1e-07, Method: Composition-based stats. Identities = 40/213 (18%), Positives = 75/213 (35%), Gaps = 33/213 (15%) Query: 1 MKQYHKFQRE-----LYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEK 55 ++ Y KF+R LY I ++A + A + K Sbjct: 718 IEAYEKFKRSAVGTALYIHPCLSEISEGDAADRATNL----TDATVDSLIESIIIKDGVK 773 Query: 56 IKALEVIIEKAN--AAPIIVAYHF---NSDLARL---QKAFPQGRTL----------DKD 97 K I+ AN ++ + L RL + + G+ + D++ Sbjct: 774 AKFFFNILSLANSAGEKLLAFSQYILPMKFLERLLVKRLGWHVGKEIFMISGDTSADDRE 833 Query: 98 PCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 Q N +LF +CG G++L G + ++ + + +Q I R Sbjct: 834 VAMDQFNNSADAKVLFGSIKACGEGISL-VGASRVIILDVHLNPSVTRQAIGR-----AF 887 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 + G ++ VFVY L+A ++ + + K I Sbjct: 888 RPGQQKKVFVYRLVAADSPEVKFHETAFKKEVI 920 >gi|88811243|ref|ZP_01126499.1| Type III restriction enzyme, res subunit [Nitrococcus mobilis Nb-231] gi|88791782|gb|EAR22893.1| Type III restriction enzyme, res subunit [Nitrococcus mobilis Nb-231] Length = 940 Score = 60.7 bits (146), Expect = 1e-07, Method: Composition-based stats. Identities = 29/153 (18%), Positives = 58/153 (37%), Gaps = 20/153 (13%) Query: 49 KEVHDEKIKALEVII-----EKANAA-PIIVAYHFNSDLARLQKAFPQGRT--------L 94 + D K + L +I E+ + +++ F A L + + Sbjct: 457 HQGTDAKAETLLELIYKLQQEENDPQLKVLIFTEFVPTQAMLAEFLESRGFSIALLNGGM 516 Query: 95 DKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 D D T + + + + G GLNLQ+ +++V F + W+ +Q I R+ Sbjct: 517 DLDARTRAQQVFSRDARVLISTDAGGEGLNLQF-CHVIVNFDMPWNPMRLEQRIGRVD-- 573 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTK 187 + G V + ++T++ V + L K Sbjct: 574 ---RIGQPHVVRAINFVLEDTVEHRVREVLGEK 603 >gi|295980982|emb|CBJ57230.1| hypothetical protein [Streptococcus pneumoniae] Length = 461 Score = 60.7 bits (146), Expect = 1e-07, Method: Composition-based stats. Identities = 22/93 (23%), Positives = 38/93 (40%), Gaps = 4/93 (4%) Query: 95 DKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 +K ++ N G++ +L A G GLN+Q + + W + QQ RI Sbjct: 97 EKKNSLSRKVNAGEVRILLASTEKGGTGLNVQSKMKAVHHLDVPWRPSDIQQRNGRII-- 154 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTK 187 RQ + V +Y+ I + + D + K Sbjct: 155 --RQGNENKEVDIYHYITKGSFDNYLWATQENK 185 >gi|322699210|gb|EFY90974.1| SNF2 family helicase [Metarhizium acridum CQMa 102] Length = 1144 Score = 60.7 bits (146), Expect = 1e-07, Method: Composition-based stats. Identities = 27/154 (17%), Positives = 67/154 (43%), Gaps = 18/154 (11%) Query: 45 EKHWKEVHDEKIKALEV-IIEKANAAPIIVAY------HFNS---DLARLQKA-FPQGRT 93 + H K+ L I+ + II+ Y + + D+ ++Q + + T Sbjct: 861 QTHLVSTVSSKLSYLIDSIVRHQDDDKIIIFYENENVAWYLASVLDMLQIQHLIYAKTLT 920 Query: 94 LDKDPCTIQEWNEGKI-PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIG 152 ++ + ++ + +L + GL+++ + + F + + + Q I R+ Sbjct: 921 TERKAQYVNTFHHNPVFRVLLMDLSQAAFGLDMRE-ASRVYFINPVLNPQVEAQAIGRV- 978 Query: 153 VTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRT 186 R+ ++ VFV L+ +++IDE++L+R + Sbjct: 979 ----RRISQQKPVFVETLVLKDSIDEVILERKQH 1008 >gi|25395804|pir||F88481 protein C16A3.1 [imported] - Caenorhabditis elegans Length = 866 Score = 60.7 bits (146), Expect = 1e-07, Method: Composition-based stats. Identities = 29/149 (19%), Positives = 57/149 (38%), Gaps = 22/149 (14%) Query: 58 ALEVIIE-----KANAAPIIVAYHFNSDLARLQKAFPQ---------GRTLDKDPCTI-- 101 E I+E A +++ H L +Q + G+T + Sbjct: 654 VCEHILENYFYPDAPPRKVLIFAHHQIVLDTIQVEVNKRKLGSIRIDGKTPSHRRTALCD 713 Query: 102 QEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGF 161 + I + + G G+ L +++VF + ++ Q +R + G Sbjct: 714 SFQTDDNIRVAVLSITAAGVGITLT-AASVVVFAEIHFNPGYLVQAEDR-----AHRVGQ 767 Query: 162 KRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 K +VFV YLIA+ T D+++ ++ K + Sbjct: 768 KDSVFVQYLIAKKTADDVMWNMVQQKLDV 796 >gi|312377236|gb|EFR24119.1| hypothetical protein AND_11532 [Anopheles darlingi] Length = 185 Score = 60.7 bits (146), Expect = 1e-07, Method: Composition-based stats. Identities = 23/134 (17%), Positives = 47/134 (35%), Gaps = 13/134 (9%) Query: 60 EVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPC-----TIQEWNEGKIPL--L 112 + + I++ H+ S +L A + ++ + E+ + + L Sbjct: 32 KELKAAEPDVKIVIFSHWESIQVKLAAALKENGVTYREKSQKFFLAVDEFKDYSAGVTCL 91 Query: 113 FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIA 172 GLNL + + + E QQ I R+ + G R V+ I Sbjct: 92 LMPLRFGSKGLNLTEATH-VFLVEPILNPGEEQQAIGRV-----HRIGQTRPTVVHRFIV 145 Query: 173 QNTIDELVLQRLRT 186 TI+E + + ++ Sbjct: 146 LRTIEEKIHETIQQ 159 >gi|211997714|gb|ACJ14802.1| putative phage-associated helicase [Candidatus Hamiltonella defensa] gi|211997717|gb|ACJ14804.1| putative phage-associated helicase [Candidatus Hamiltonella defensa] Length = 69 Score = 60.7 bits (146), Expect = 1e-07, Method: Composition-based stats. Identities = 19/48 (39%), Positives = 29/48 (60%) Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKET 202 R + G R VF+++L+ ++ID VL+ L K Q LL+ALKK+ Sbjct: 4 RLHRQGQTRPVFIHHLVMNDSIDLTVLEALENKHITQKALLDALKKDI 51 >gi|34394721|dbj|BAC84084.1| putative SNF2 domain/helicase domain-containing protein [Oryza sativa Japonica Group] Length = 872 Score = 60.7 bits (146), Expect = 1e-07, Method: Composition-based stats. Identities = 40/213 (18%), Positives = 75/213 (35%), Gaps = 33/213 (15%) Query: 1 MKQYHKFQRE-----LYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEK 55 ++ Y KF+R LY I ++A + A + K Sbjct: 624 IEAYEKFKRSAVGTALYIHPCLSEISEGDAADRATNL----TDATVDSLIESIIIKDGVK 679 Query: 56 IKALEVIIEKAN--AAPIIVAYHF---NSDLARL---QKAFPQGRTL----------DKD 97 K I+ AN ++ + L RL + + G+ + D++ Sbjct: 680 AKFFFNILSLANSAGEKLLAFSQYILPMKFLERLLVKRLGWHVGKEIFMISGDTSADDRE 739 Query: 98 PCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 Q N +LF +CG G++L G + ++ + + +Q I R Sbjct: 740 VAMDQFNNSADAKVLFGSIKACGEGISL-VGASRVIILDVHLNPSVTRQAIGR-----AF 793 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 + G ++ VFVY L+A ++ + + K I Sbjct: 794 RPGQQKKVFVYRLVAADSPEVKFHETAFKKEVI 826 >gi|54026418|ref|YP_120660.1| putative helicase [Nocardia farcinica IFM 10152] gi|54017926|dbj|BAD59296.1| putative helicase [Nocardia farcinica IFM 10152] Length = 1136 Score = 60.7 bits (146), Expect = 1e-07, Method: Composition-based stats. Identities = 34/175 (19%), Positives = 63/175 (36%), Gaps = 23/175 (13%) Query: 32 CLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAP--IIVAYHFNSDLARLQKAFP 89 +QLA +++ W E+ E + ++ P +I+ L L+ Sbjct: 457 LIQLAKQVRDRGDDRKWSELSRILQD--EGLTNDSSGRPRKLIIFTEHRDTLEYLRGRIG 514 Query: 90 QGRTLDKDPCTI-------------QEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFS 136 I +E+ + + + + G GLNLQ +++V + Sbjct: 515 SLLGRPDAVQVIHGGVRRGERRRITEEFTKNRDCRILLATDAAGEGLNLQ-AAHLMVNYD 573 Query: 137 LWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQ 191 L W+ +Q RI + G + ++ L+A NT + V RL K Q Sbjct: 574 LPWNPNRIEQRFGRI-----HRIGQEEVCRLWNLVALNTREGEVFARLLEKIEEQ 623 >gi|119356468|ref|YP_911112.1| helicase domain-containing protein [Chlorobium phaeobacteroides DSM 266] gi|119353817|gb|ABL64688.1| helicase domain protein [Chlorobium phaeobacteroides DSM 266] Length = 1169 Score = 60.7 bits (146), Expect = 1e-07, Method: Composition-based stats. Identities = 38/180 (21%), Positives = 64/180 (35%), Gaps = 32/180 (17%) Query: 48 WKEVHDEKIKALEVIIE------KANAA--PIIVAYHFNSDLARLQKAFPQ--------- 90 D K L I++ A II+ L L + Sbjct: 471 VASGKDRKWDELSRILQNEPQMRDAGGRMRKIIIFSEHRDTLNYLHEKIAGVLGSHDAIV 530 Query: 91 ----GRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQ 145 D + + + +I +L A + G G+NLQ N++V + L W+ + Sbjct: 531 VIHGAVHRDDRRKAQELFRSDPEIRVLVA-TDAAGEGINLQN-ANLMVNYDLPWNPNRLE 588 Query: 146 QMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIHV 205 Q RI + G + ++ L+A+ T + V RL K + +ALK E +V Sbjct: 589 QRFGRI-----HRIGQQEVCHLWNLVAKETREGDVYFRLLEKLQVVS---DALKGEVFNV 640 >gi|154321994|ref|XP_001560312.1| hypothetical protein BC1G_01144 [Botryotinia fuckeliana B05.10] gi|150850391|gb|EDN25584.1| hypothetical protein BC1G_01144 [Botryotinia fuckeliana B05.10] Length = 730 Score = 60.7 bits (146), Expect = 1e-07, Method: Composition-based stats. Identities = 33/178 (18%), Positives = 66/178 (37%), Gaps = 20/178 (11%) Query: 23 FNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLA 82 + + K ++L E+ + +K L ++E+ ++ Y Sbjct: 539 VKESGRLSKLMELYRHLTITYPERKMV-MFSCFLKFL-DVVEEG----LLRDYKIQPL-- 590 Query: 83 RLQKAFPQGRTLDKDPCTIQEWNEGKIPL-LFAHPASCGHGLNLQYGGNILVFFSLWWDL 141 + D+ P + + E K + L S GLN+ +I++ WW+ Sbjct: 591 ----RYDGTTPTDQRPKIEEAYGESKSNVPLLMTAGSSSIGLNIT-SASIVIMCEPWWNR 645 Query: 142 EEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNT-IDELVLQRLRTKSTIQDLLLNAL 198 +Q I R+ + G ++ V +Y N+ ID+ VL K + + L+ L Sbjct: 646 NLEKQAIARV-----YRQGQQKNVLLYRFFGLNSEIDQEVLSVAEAKVAVNEDLMKVL 698 >gi|331234292|ref|XP_003329806.1| ATPase [Puccinia graminis f. sp. tritici CRL 75-36-700-3] gi|309308796|gb|EFP85387.1| ATPase [Puccinia graminis f. sp. tritici CRL 75-36-700-3] Length = 328 Score = 60.7 bits (146), Expect = 1e-07, Method: Composition-based stats. Identities = 29/169 (17%), Positives = 58/169 (34%), Gaps = 24/169 (14%) Query: 20 IEAFNSASKTVKCLQLANGAVYYDEEKH-----WKEVHD--EKIKALEVIIEKANAAPII 72 ++ + + V QL N ++EK W + +K L + + N A + Sbjct: 155 WDSIHFVGELVNLRQLCNPPALIEKEKGTGGYFWNQSSKIVHLLKDLPLFLASGNQARAV 214 Query: 73 VAYHFNSDLARLQ-----------KAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGH 121 + F L ++ + + + W + +L A + G Sbjct: 215 IFSEFKRFLQIIEIALNEWGIQFTTHYGKMDNNTQRKNLEYFWRDVSCKVLLATIKTEGV 274 Query: 122 GLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYL 170 G++L+ + + W+ +Q I+R+ Q G K V V L Sbjct: 275 GIDLRC-AHKVYLMEPTWNPAVEEQAIDRL-----YQIGQKERVQVVRL 317 >gi|297820192|ref|XP_002877979.1| SNF2 domain-containing protein [Arabidopsis lyrata subsp. lyrata] gi|297323817|gb|EFH54238.1| SNF2 domain-containing protein [Arabidopsis lyrata subsp. lyrata] Length = 1370 Score = 60.7 bits (146), Expect = 1e-07, Method: Composition-based stats. Identities = 26/139 (18%), Positives = 48/139 (34%), Gaps = 19/139 (13%) Query: 70 PIIVAYHFNSDLARLQKAFPQGRTL-----------DKDPCTIQEWNEGKIPLLFAHPAS 118 +++ F + +++ +K N+ L S Sbjct: 1187 KVLIFSQFLEHIHVIEQQLTTAGIKFGKMYSPMHSCNKMKSLAMFQNDADCMALLMD-GS 1245 Query: 119 CGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDE 178 GL+L + + + WD +Q+I R + G KR +FV L TI+E Sbjct: 1246 AALGLDLSFVTH-VFLMEPIWDKSLEEQVISR-----AHRMGAKRPIFVETLTMCGTIEE 1299 Query: 179 LVLQRLRTKSTIQDLLLNA 197 +++ L D LL+ Sbjct: 1300 QMMRFLEDAEK-SDRLLSG 1317 >gi|254516518|ref|ZP_05128577.1| putative helicase, Snf2 family [gamma proteobacterium NOR5-3] gi|219674941|gb|EED31308.1| putative helicase, Snf2 family [gamma proteobacterium NOR5-3] Length = 1167 Score = 60.7 bits (146), Expect = 1e-07, Method: Composition-based stats. Identities = 30/155 (19%), Positives = 58/155 (37%), Gaps = 22/155 (14%) Query: 44 EEKHWKEVHDEKIKALEVIIEK---ANAAPIIVAYHFNSDLARLQKAFPQGRTL------ 94 ++ + V D K++AL II + + +++ F L+ L Sbjct: 652 ADRASRLVDDPKLEALVGIIREKQLMDNNKLLIFSTFRHTLSYLLPRLESAGARVGLVHG 711 Query: 95 ----DKDPCTIQEW--NEGKIPLL--FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 D+ T + N+ + GL+ Q+ + LV + + W+ +Q Sbjct: 712 GIADDERRQTRARFALNKAEPTAFDVLLSSEVGTEGLDNQF-CDTLVNYDIPWNPMRIEQ 770 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVL 181 I RI R+ AV + +I +NT+D + Sbjct: 771 RIGRID----RRGQKSEAVSIKNMIVRNTVDARIY 801 >gi|120554237|ref|YP_958588.1| helicase domain-containing protein [Marinobacter aquaeolei VT8] gi|120324086|gb|ABM18401.1| helicase domain protein [Marinobacter aquaeolei VT8] Length = 1046 Score = 60.7 bits (146), Expect = 1e-07, Method: Composition-based stats. Identities = 41/203 (20%), Positives = 84/203 (41%), Gaps = 20/203 (9%) Query: 10 ELYCDLQGENI---EAFNSASKTVKCLQLANGAVY-YDEEKHWKEVHDEKIKALEVIIEK 65 EL +L GE E S + VK L L ++ Y+ K +++ I L+ + Sbjct: 480 ELLYELDGETEGDNEPPASMGELVKTLALVGKSIGSYESLKASDTKYNQLISVLKDYWAQ 539 Query: 66 ANAAPIIVAYHFNSDLARLQKAFPQGRT--------LDKDPCTIQEWNEGKIPLLFAHPA 117 II+ + L L + + +DK+ I+++ + Sbjct: 540 YPDKKIILFAFYKGTLRYLHERLSEEGIGSLVLHGGMDKNE-VIRQFRGDAQYNILLSSE 598 Query: 118 SCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA-VFVYYLIAQNTI 176 G++LQ+ ++L+ + L W+ +Q I RI + G + + ++ +I ++TI Sbjct: 599 VAAEGVDLQFS-SVLINYDLPWNPMRIEQRIGRID-----RIGQEEDRIHIWNMIYEDTI 652 Query: 177 DELVLQRLRTKSTIQDLLLNALK 199 D+ V RL + I + +++ Sbjct: 653 DQRVYDRLLDRLDIFRNAMGSME 675 >gi|320032599|gb|EFW14551.1| SNF2 family helicase/ATPase [Coccidioides posadasii str. Silveira] Length = 1406 Score = 60.7 bits (146), Expect = 1e-07, Method: Composition-based stats. Identities = 24/120 (20%), Positives = 41/120 (34%), Gaps = 10/120 (8%) Query: 68 AAPIIVAYHFNSDLARLQKAFPQGRT----LDKDPCTIQEWNEGKIPLLFAHPASCGHGL 123 A IV + S L L AF + R D + + I H + GL Sbjct: 1176 GAKSIVFSQYKSFLGILASAFSRFRIEFSSFDSYNGIERFKQDPSIECFLLHAKAHSSGL 1235 Query: 124 NLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQR 183 NL + + + Q I R+ + G R V+ + ++++E + Q Sbjct: 1236 NLVNATH-VFLCEPLINTAIELQAIARV-----HRIGQHRETTVWMYLVSDSVEESIYQL 1289 >gi|114583216|ref|XP_001152818.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent regulator of chromatin a-like 1 isoform 1 [Pan troglodytes] Length = 575 Score = 60.7 bits (146), Expect = 1e-07, Method: Composition-based stats. Identities = 30/181 (16%), Positives = 67/181 (37%), Gaps = 22/181 (12%) Query: 22 AFNSASK----TVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHF 77 A ++A+K K Q A+ + + I+ + ++E +V H Sbjct: 297 ALDAAAKEMTTKDKTKQQQKDALILFFNRTAEAKIPSVIEYILDLLES-GREKFLVFAHH 355 Query: 78 NSDLARLQKAFP---------QGRTLDKDPCTI-QEWN-EGKIPLLFAHPASCGHGLNLQ 126 L + + G T + + Q++ + + + GL Sbjct: 356 KVVLDAITQELERKHVQHIRIDGSTSSAEREDLCQQFQLSERHAVAVLSITAANMGLTF- 414 Query: 127 YGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRT 186 +++VF L+W+ Q +R+ + G +V ++YL+A+ T D+ + ++ Sbjct: 415 SSADLVVFAELFWNPGVLIQAEDRV-----HRIGQTSSVGIHYLVAKGTADDYLWPLIQE 469 Query: 187 K 187 K Sbjct: 470 K 470 >gi|7019996|dbj|BAA90955.1| unnamed protein product [Homo sapiens] Length = 619 Score = 60.7 bits (146), Expect = 1e-07, Method: Composition-based stats. Identities = 30/181 (16%), Positives = 67/181 (37%), Gaps = 22/181 (12%) Query: 22 AFNSASK----TVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHF 77 A ++A+K K Q A+ + + I+ + ++E +V H Sbjct: 341 ALDAAAKEMTTKDKTKQQQKDALILFFNRTAEAKIPSVIEYILDLLES-GREKFLVFAHH 399 Query: 78 NSDLARLQKAFP---------QGRTLDKDPCTI-QEWN-EGKIPLLFAHPASCGHGLNLQ 126 L + + G T + + Q++ + + + GL Sbjct: 400 KVVLDAITQELERKHVQHIRIDGSTSSAEREDLCQQFQLSERHAVAVLSITAANMGLTF- 458 Query: 127 YGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRT 186 +++VF L+W+ Q +R+ + G +V ++YL+A+ T D+ + ++ Sbjct: 459 SSADLVVFAELFWNPGVLIQAEDRV-----HRIGQTSSVGIHYLVAKGTADDYLWPLIQE 513 Query: 187 K 187 K Sbjct: 514 K 514 >gi|99035905|ref|ZP_01314954.1| hypothetical protein Wendoof_01000200 [Wolbachia endosymbiont of Drosophila willistoni TSC#14030-0811.24] Length = 845 Score = 60.7 bits (146), Expect = 1e-07, Method: Composition-based stats. Identities = 18/126 (14%), Positives = 40/126 (31%), Gaps = 15/126 (11%) Query: 27 SKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANA--APIIVAYHFNSDLARL 84 Q+ N + ++K K++ LE I+ ++ + + Sbjct: 721 KLINALKQICNHPSQFGKKKRASIEQSGKMQMLEEILISIGEVAEKSLIFTQYTEMGEII 780 Query: 85 QKAFPQ-----------GRTLDKDPCTIQEWNE-GKIPLLFAHPASCGHGLNLQYGGNIL 132 + + G + I ++ + +L + G GLNL N + Sbjct: 781 ARLLEERFESEVPFLHGGLSRKARDTMINDFQNLFQSNILIVSLKAGGTGLNLT-AANHV 839 Query: 133 VFFSLW 138 + + LW Sbjct: 840 IHYDLW 845 >gi|116329390|ref|YP_799110.1| DNA/RNA helicase [Leptospira borgpetersenii serovar Hardjo-bovis L550] gi|116330009|ref|YP_799727.1| DNA/RNA helicase [Leptospira borgpetersenii serovar Hardjo-bovis JB197] gi|116122134|gb|ABJ80177.1| DNA/RNA helicase Superfamily II [Leptospira borgpetersenii serovar Hardjo-bovis L550] gi|116123698|gb|ABJ74969.1| DNA/RNA helicase Superfamily II [Leptospira borgpetersenii serovar Hardjo-bovis JB197] Length = 951 Score = 60.7 bits (146), Expect = 1e-07, Method: Composition-based stats. Identities = 27/96 (28%), Positives = 45/96 (46%), Gaps = 13/96 (13%) Query: 113 FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIA 172 + G G NLQ+ N+L + L W + +Q I RI + G K VF++ + Sbjct: 531 LICTEAGGEGRNLQF-ANVLFNYDLPWSPLKIEQRIGRI-----HRFGQKDNVFIFNFAS 584 Query: 173 QNTIDELVLQRLRTKSTI-------QDLLLNALKKE 201 ++T+ E +L+ L K + D LL A++ E Sbjct: 585 KDTVAERILEVLTNKIRLFEESIGSSDELLGAIEDE 620 >gi|269839175|ref|YP_003323867.1| helicase [Thermobaculum terrenum ATCC BAA-798] gi|269790905|gb|ACZ43045.1| helicase domain protein [Thermobaculum terrenum ATCC BAA-798] Length = 1160 Score = 60.7 bits (146), Expect = 1e-07, Method: Composition-based stats. Identities = 38/187 (20%), Positives = 65/187 (34%), Gaps = 33/187 (17%) Query: 27 SKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKAN-------AAPIIVAYHFNS 79 ++ K L A+ + +D K L +++ + IIV Sbjct: 458 AEIEKLRDLEGMAL-----DLVRSGNDRKWNELSNLLQSPHMLNPDGTRRKIIVFTEHLD 512 Query: 80 DLARLQKAFP--------------QGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNL 125 L L+K D+ C + + + +L A + G G+NL Sbjct: 513 TLRYLRKRISNLLGNDEAVVAIHGGMSREDRMRCQEEFVHNPDVHVLVA-TDAAGEGINL 571 Query: 126 QYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLR 185 Q N+LV + L W+ +Q RI + G ++ L+A+ T + V L Sbjct: 572 QR-ANLLVNYDLPWNPNRLEQRFGRI-----HRIGQTEVCHMWNLVAKGTREGEVYLTLL 625 Query: 186 TKSTIQD 192 TK Q Sbjct: 626 TKLDQQS 632 >gi|169830470|ref|YP_001716452.1| helicase domain-containing protein [Candidatus Desulforudis audaxviator MP104C] gi|169637314|gb|ACA58820.1| helicase domain protein [Candidatus Desulforudis audaxviator MP104C] Length = 578 Score = 60.7 bits (146), Expect = 1e-07, Method: Composition-based stats. Identities = 23/88 (26%), Positives = 40/88 (45%), Gaps = 6/88 (6%) Query: 112 LFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLI 171 + G NLQ+ IL+ + L W+ +Q I R+ + G R V +Y L Sbjct: 432 FLVSTDTGSEGRNLQF-CRILINYDLPWNPMRIEQRIGRL-----HRLGQTREVLIYNLS 485 Query: 172 AQNTIDELVLQRLRTKSTIQDLLLNALK 199 A T++ +L+ L K + L++ L+ Sbjct: 486 AAETVEAHLLELLDAKINMFQLVIGELE 513 >gi|119185176|ref|XP_001243398.1| hypothetical protein CIMG_07294 [Coccidioides immitis RS] Length = 1386 Score = 60.7 bits (146), Expect = 1e-07, Method: Composition-based stats. Identities = 24/120 (20%), Positives = 41/120 (34%), Gaps = 10/120 (8%) Query: 68 AAPIIVAYHFNSDLARLQKAFPQGRT----LDKDPCTIQEWNEGKIPLLFAHPASCGHGL 123 A IV + S L L AF + R D + + I H + GL Sbjct: 1156 GAKSIVFSQYKSFLGILASAFSRFRIEFSSFDSYNGIERFKQDPSIECFLLHAKAHSSGL 1215 Query: 124 NLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQR 183 NL + + + Q I R+ + G R V+ + ++++E + Q Sbjct: 1216 NLVNATH-VFLCEPLINTAIELQAIARV-----HRIGQHRETTVWMYLVSDSVEESIYQL 1269 >gi|254565729|ref|XP_002489975.1| hypothetical protein [Pichia pastoris GS115] gi|238029771|emb|CAY67694.1| Hypothetical protein PAS_chr1-1_0318 [Pichia pastoris GS115] gi|328350386|emb|CCA36786.1| hypothetical protein PP7435_Chr1-0638 [Pichia pastoris CBS 7435] Length = 1169 Score = 60.7 bits (146), Expect = 1e-07, Method: Composition-based stats. Identities = 27/160 (16%), Positives = 56/160 (35%), Gaps = 19/160 (11%) Query: 47 HWKEVHDEKIKAL-EVIIE-KANAAPIIVAYHFNSDLARLQKAFP-----------QGRT 93 K+ L ++E +A +V + F L +A + Sbjct: 895 TVVGTGSAKLSYLTARLLEHQAGGIKSLVFFEFEDSAYYLSEALDLLGVKYFMYASYKKP 954 Query: 94 LDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGV 153 +++ ++ L HGL + + F + W + Q I+R Sbjct: 955 IERAENLVKFTEIESGAALIMDLKLASHGLTI-IAATRVYFINPVWRRDLEAQAIKR--- 1010 Query: 154 TRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDL 193 + G ++ V V LI + TI+E +LQ+ +++ + Sbjct: 1011 --AHRIGQQKEVKVETLILRGTIEEEMLQQRSAEASSNNE 1048 >gi|78190557|gb|ABB29600.1| SWI/SNF-related matrix-associated regulator of chromatin a5 [Platynereis dumerilii] Length = 375 Score = 60.7 bits (146), Expect = 1e-07, Method: Composition-based stats. Identities = 32/174 (18%), Positives = 64/174 (36%), Gaps = 35/174 (20%) Query: 2 KQY---HKFQRELYCDLQGENIEAFNSASKTVK------CLQL---ANGAVYYD------ 43 K Y K QRE Y + ++I+ N A K+ K +QL AN +D Sbjct: 201 KIYIGLSKMQREWYTKILMKDIDVVNGAGKSDKMRLLNILMQLRKCANHPYLFDGAEPGP 260 Query: 44 --EEKHWKEVHDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQ---------KAFPQ 90 + K+ L+ ++ +A + +++ L L+ Sbjct: 261 PYTTDQHLVDNAGKMVLLDKLLMRLEAQDSRVLIFSQMTRMLDILEDYCQWRRYEYCRLD 320 Query: 91 GRTLDKDPC-TIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDL 141 G+T ++ +I ++N + + G G+NL +++V + W+ Sbjct: 321 GQTPHEERQKSIDDFNRPDSTKFVFMLSTRAGGLGINL-ATADVVVLYDSDWNP 373 >gi|291336801|gb|ADD96336.1| hypothetical protein [uncultured organism MedDCM-OCT-S08-C700] Length = 239 Score = 60.7 bits (146), Expect = 1e-07, Method: Composition-based stats. Identities = 33/171 (19%), Positives = 58/171 (33%), Gaps = 16/171 (9%) Query: 19 NIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFN 78 + A A K Q+ NG V + + I+ I + Y F Sbjct: 45 AVVADTGAKVMSKLKQIYNGHVITERHGAIIFDKSK-----AEYIKNNFKGKIAILYCFI 99 Query: 79 SDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLW 138 ++ L++ F D+ +N + SC G+NL + L+F + Sbjct: 100 AEGKMLREYFG-----DRATDDPDVFNAVSGSVFIGQVKSCREGVNLSG-ADHLIFMGID 153 Query: 139 WDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKST 189 + + Q ER G R V+Y+ A I+ V ++ K + Sbjct: 154 YSALSYLQGRERASF-----LGRDRKNKVHYIFADKGIELKVYDVVKLKES 199 >gi|189201379|ref|XP_001937026.1| hypothetical protein PTRG_06693 [Pyrenophora tritici-repentis Pt-1C-BFP] gi|187984125|gb|EDU49613.1| hypothetical protein PTRG_06693 [Pyrenophora tritici-repentis Pt-1C-BFP] Length = 909 Score = 60.7 bits (146), Expect = 1e-07, Method: Composition-based stats. Identities = 27/147 (18%), Positives = 46/147 (31%), Gaps = 17/147 (11%) Query: 48 WKEVHDEKIKAL-EVIIEKANAAPIIVAYHFNSDLARLQKAF----------PQGRTLDK 96 V KI L E I N + IV + L + +K Sbjct: 759 VHTVFPSKIMTLYEDIQAHCNDSKSIVFSFWKRSLDMVAALLTVNNVSFVRVDGSVPFNK 818 Query: 97 DPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTR 155 + ++ I +L + GLN N + + W+ Q I R+ Sbjct: 819 RKAILNDFKCRNDISVLLMTFGTGAVGLNSLSIANRVHILAPQWNPSVEHQAIGRVV--- 875 Query: 156 QRQAGFKRAVFVYYLIAQNTIDELVLQ 182 + G + V + I T++E+ L Sbjct: 876 --RLGQQNPVTIVRYIVDKTVEEVALA 900 >gi|108759757|ref|YP_629003.1| putative RNA polymerase-associated protein RapA [Myxococcus xanthus DK 1622] gi|108463637|gb|ABF88822.1| putative RNA polymerase-associated protein RapA [Myxococcus xanthus DK 1622] Length = 1022 Score = 60.7 bits (146), Expect = 1e-07, Method: Composition-based stats. Identities = 28/165 (16%), Positives = 53/165 (32%), Gaps = 23/165 (13%) Query: 54 EKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRT----------LDKDPCTIQE 103 + L + + AA ++V L LQ + L + + Sbjct: 502 AFLGVLRGVWKTEPAAKVLVFTESRDTLDALQSELGREGVEALGYHGDLPLVERDRQVAR 561 Query: 104 WNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKR 163 + + + P + G G N Q+ + LV + L W +Q I R+ + G Sbjct: 562 FRDPEGPKVLLCTEVGGEGRNFQF-AHHLVHYDLPWSPATVEQRIGRLD-----RIGQTH 615 Query: 164 AVFVYYLIAQNTIDELVLQRLRTKSTIQ-------DLLLNALKKE 201 V ++ T+ VL L + D +L ++ Sbjct: 616 PVEIHVFDPAGTLASDVLMLLADAVGVFGETVGGLDAVLEEVEAR 660 >gi|115467422|ref|NP_001057310.1| Os06g0255700 [Oryza sativa Japonica Group] gi|52076415|dbj|BAD45245.1| putative DNA repair protein [Oryza sativa Japonica Group] gi|52077256|dbj|BAD46298.1| putative DNA repair protein [Oryza sativa Japonica Group] gi|113595350|dbj|BAF19224.1| Os06g0255700 [Oryza sativa Japonica Group] Length = 946 Score = 60.7 bits (146), Expect = 1e-07, Method: Composition-based stats. Identities = 40/213 (18%), Positives = 75/213 (35%), Gaps = 33/213 (15%) Query: 1 MKQYHKFQRE-----LYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEK 55 ++ Y KF+R LY I ++A + A + K Sbjct: 698 IEAYEKFKRSAVGTALYIHPCLSEISEGDAADRASNL----TDATVDSLIESIIIKDGVK 753 Query: 56 IKALEVIIEKAN--AAPIIVAYHF---NSDLARL---QKAFPQGRTL----------DKD 97 K I+ AN ++ + L RL + + G+ + D++ Sbjct: 754 AKFFFNILSLANSAGEKLLAFSQYILPMKFLERLLVKRLGWHVGKEIFMISGDTSADDRE 813 Query: 98 PCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 Q N +LF +CG G++L G + ++ + + +Q I R Sbjct: 814 VAMDQFNNSADAKVLFGSIKACGEGISL-VGASRVIILDVHLNPSVTRQAIGR-----AF 867 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 + G ++ VFVY L+A ++ + + K I Sbjct: 868 RPGQQKKVFVYRLVAADSPEVKFHETAFKKEVI 900 >gi|219118763|ref|XP_002180148.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1] gi|217408405|gb|EEC48339.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1] Length = 773 Score = 60.7 bits (146), Expect = 1e-07, Method: Composition-based stats. Identities = 30/175 (17%), Positives = 59/175 (33%), Gaps = 23/175 (13%) Query: 36 ANGAVYYDEEKHWKEVHDEKIKALEVIIEK-ANAAPIIVAYHFNSDLARLQKAFPQ---- 90 ++ A+ ++ KI A ++ A P IV F S + Q + Sbjct: 575 SSEAILGAVQRVRLVASTAKIDATVEYAKRILEAEPAIVI--FTSFVKVAQNVHQKLTDA 632 Query: 91 --------GRTLDKDPCT-IQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDL 141 G T+ K + + G + G GL L ++ W Sbjct: 633 GWQGSCLTGETVAKSRQALVDNFQNGLTAFFVCTFGAGGVGLTLT-AACTVILLDRPWTP 691 Query: 142 EEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + Q +R+ R+ G + V ++ A + +D+ + + KS +L+ Sbjct: 692 GDAHQAEDRV-----RRIGQTKPVKSLWMTAFD-LDKQIDSIIEQKSKTAATVLS 740 >gi|305680870|ref|ZP_07403677.1| helicase C-terminal domain protein [Corynebacterium matruchotii ATCC 14266] gi|305659075|gb|EFM48575.1| helicase C-terminal domain protein [Corynebacterium matruchotii ATCC 14266] Length = 1168 Score = 60.7 bits (146), Expect = 1e-07, Method: Composition-based stats. Identities = 38/200 (19%), Positives = 67/200 (33%), Gaps = 31/200 (15%) Query: 13 CDLQGENIEAFNSASKTVKCLQLANGAVYYD-----EEKHWKEVHDEKIKALEVIIEK-- 65 +L+ + E + A+ +QL + D + + D K L I+E Sbjct: 431 AELEQQVDEVVDRATAAQDQVQLTHEIAVLDGLIATARRVRNQDEDRKWVELRKILESKV 490 Query: 66 -----ANAAPIIVAYHFNSDLARLQKAFPQ-------------GRTLDKDPCTIQEWNEG 107 II+ L L+ G +++ Sbjct: 491 LTGTNGENRKIIIFTEHRDTLTYLEDKITTQLGSTDAVVTIHGGTPRHLRQAIREQFAHD 550 Query: 108 KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFV 167 L+ + G GLNLQ +++V + L W+ +Q RI + G + + Sbjct: 551 PRTLVLLATDAAGEGLNLQR-AHLMVNYDLPWNPNRIEQRFGRI-----HRIGQREVCHL 604 Query: 168 YYLIAQNTIDELVLQRLRTK 187 + L+A NT + V RL K Sbjct: 605 WNLVAHNTREGDVFNRLLEK 624 >gi|170289581|ref|YP_001739819.1| helicase domain-containing protein [Thermotoga sp. RQ2] gi|222100561|ref|YP_002535129.1| Helicase domain protein [Thermotoga neapolitana DSM 4359] gi|170177084|gb|ACB10136.1| helicase domain protein [Thermotoga sp. RQ2] gi|221572951|gb|ACM23763.1| Helicase domain protein [Thermotoga neapolitana DSM 4359] Length = 1013 Score = 60.7 bits (146), Expect = 1e-07, Method: Composition-based stats. Identities = 40/211 (18%), Positives = 73/211 (34%), Gaps = 39/211 (18%) Query: 4 YHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEE----KHWKEVHDEKIKAL 59 Y + + E ++ NS +K + G + E+ +D K+K L Sbjct: 343 YDEMELEENSEIDDLISSIINSVAKRYPLDK---GQINALEKILKIGKAIGKNDSKLKTL 399 Query: 60 EVIIEKANAA--PIIVAYHFNSDLARLQKAFPQ--------------------GRTLDKD 97 ++ +IV F L L+ P G ++ Sbjct: 400 AEVLAYHLKKNEKVIVFTEFKDTLEYLRNNLPTLLEQEGIHLSEEKDISVLHGGMKSEEI 459 Query: 98 PCTIQEW-NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 ++++ N+GK L GLNLQ NIL+ + + W + +Q + RI Sbjct: 460 EKQVEKFANDGK---LLISTDVASEGLNLQV-ANILINYEIPWSPIKLEQRVGRIW---- 511 Query: 157 RQAGFKRAVFVYYLIAQNTIDELVLQRLRTK 187 + + Y L+ + D +L+ L K Sbjct: 512 -RLNQTKETIAYTLLLNHEADLQILESLYQK 541 >gi|325119483|emb|CBZ55036.1| hypothetical protein NCLIV_054610 [Neospora caninum Liverpool] Length = 1180 Score = 60.7 bits (146), Expect = 1e-07, Method: Composition-based stats. Identities = 25/140 (17%), Positives = 57/140 (40%), Gaps = 17/140 (12%) Query: 69 APIIVAYHFNSDLARLQKAFPQ---------GRTLDKDPCTIQEWN-EGKIPLLFAHPAS 118 + I++ + S L LQ A + G + ++ + + +L Sbjct: 865 SKILIFSEWPSALDLLQVALRRTGVASLKYLGGHSKAELAKLRCFRHDPDARVLLCSLLR 924 Query: 119 CGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDE 178 G GL L N ++F + + E +Q + R+ + KR V+ I +++++E Sbjct: 925 AGRGLTLTE-ANHVIFLEVPLNRAEEEQAVGRV-----YRMAQKRQTHVWRFIVKDSVEE 978 Query: 179 LVLQRLRT-KSTIQDLLLNA 197 ++Q + + ++ + L A Sbjct: 979 RIVQMRQNPRDSLSERLATA 998 >gi|325093103|gb|EGC46413.1| SNF2 family helicase [Ajellomyces capsulatus H88] Length = 2239 Score = 60.7 bits (146), Expect = 1e-07, Method: Composition-based stats. Identities = 35/165 (21%), Positives = 67/165 (40%), Gaps = 21/165 (12%) Query: 45 EKHWKEVHDEKIKALEVIIEK----ANAAPIIVAYHFNSDL-----ARLQKA---FPQGR 92 K W+E K+ L +++ A +++ F DL A LQKA Sbjct: 2018 GKKWQEYGGTKLLELTRLVQDTERIAEDEQVLLFIQF-PDLMEAASAALQKANIPHLMIS 2076 Query: 93 TLDKDPCT-IQEWNEG----KIPLLFAHPAS-CGHGLNLQYGGNILVFFSL-WWDLEEHQ 145 D+ + I E+ + +L H GLNLQ +++ F L ++ Sbjct: 2077 VNDRTSSSKIAEFQTRAEKVESKVLILHLGDVSASGLNLQNANHVIFFHPLFTKSQYDYN 2136 Query: 146 QMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 + + R R+ G ++ V +Y+ +A TI+ + ++ R + + Sbjct: 2137 SGMA-QAIGRSRRYGQQKHVHIYHFLALKTIEVNIFEQRRRERLV 2180 >gi|121609717|ref|YP_997524.1| helicase domain-containing protein [Verminephrobacter eiseniae EF01-2] gi|121554357|gb|ABM58506.1| helicase domain protein [Verminephrobacter eiseniae EF01-2] Length = 906 Score = 60.7 bits (146), Expect = 1e-07, Method: Composition-based stats. Identities = 39/241 (16%), Positives = 76/241 (31%), Gaps = 53/241 (21%) Query: 5 HKFQRELYCDLQGENIEAFNSA----------SKTVKCLQLANGAVYYDEEKHWKEVHDE 54 F E Y D + ++ +A + A V+ +++ W E+ Sbjct: 160 DDFSPEAYEDFEEYLVDQTTAAQTIQELEAEIILLEGLEEQARQVVHSGQDRKWDEL-SR 218 Query: 55 KIKALEVIIEKANA-APIIVAYHFNSDLARLQKAFPQ-------------GRTLDKDPCT 100 ++ + + A +I+ L L G + Sbjct: 219 LLQDTPEMHDSAGRQRKLIIFTEHRDTLNYLAVKIRGLIGSEEAVVMIHGGVKREDRRKV 278 Query: 101 IQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 + + + G G+NLQ N++V + L W+ +Q RI + G Sbjct: 279 QELFRNDPSARFLVATDAAGEGVNLQN-ANLMVNYDLPWNPNRLEQRFGRI-----HRIG 332 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTK----------------------STIQDLLLNAL 198 ++ ++A T + V QRL K ++QDLL+ A+ Sbjct: 333 QTEVCHLWNMVAAETREGDVFQRLFEKLEVERQALGGRVFDILGEVFEEKSLQDLLIEAI 392 Query: 199 K 199 + Sbjct: 393 R 393 >gi|218197913|gb|EEC80340.1| hypothetical protein OsI_22411 [Oryza sativa Indica Group] Length = 949 Score = 60.3 bits (145), Expect = 1e-07, Method: Composition-based stats. Identities = 40/213 (18%), Positives = 75/213 (35%), Gaps = 33/213 (15%) Query: 1 MKQYHKFQRE-----LYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEK 55 ++ Y KF+R LY I ++A + A + K Sbjct: 698 IEAYEKFKRSAVGTALYIHPCLSEISEGDAADRASNL----TDATVDSLIESIIIKDGVK 753 Query: 56 IKALEVIIEKAN--AAPIIVAYHF---NSDLARL---QKAFPQGRTL----------DKD 97 K I+ AN ++ + L RL + + G+ + D++ Sbjct: 754 AKFFFNILSLANSAGEKLLAFSQYILPMKFLERLLVKRLGWHVGKEIFMISGDTSADDRE 813 Query: 98 PCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 Q N +LF +CG G++L G + ++ + + +Q I R Sbjct: 814 VAMDQFNNSADAKVLFGSIKACGEGISL-VGASRVIILDVHLNPSVTRQAIGR-----AF 867 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 + G ++ VFVY L+A ++ + + K I Sbjct: 868 RPGQQKKVFVYRLVAADSPEVKFHETAFKKEVI 900 >gi|222635335|gb|EEE65467.1| hypothetical protein OsJ_20857 [Oryza sativa Japonica Group] Length = 949 Score = 60.3 bits (145), Expect = 1e-07, Method: Composition-based stats. Identities = 40/213 (18%), Positives = 75/213 (35%), Gaps = 33/213 (15%) Query: 1 MKQYHKFQRE-----LYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEK 55 ++ Y KF+R LY I ++A + A + K Sbjct: 698 IEAYEKFKRSAVGTALYIHPCLSEISEGDAADRASNL----TDATVDSLIESIIIKDGVK 753 Query: 56 IKALEVIIEKAN--AAPIIVAYHF---NSDLARL---QKAFPQGRTL----------DKD 97 K I+ AN ++ + L RL + + G+ + D++ Sbjct: 754 AKFFFNILSLANSAGEKLLAFSQYILPMKFLERLLVKRLGWHVGKEIFMISGDTSADDRE 813 Query: 98 PCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 Q N +LF +CG G++L G + ++ + + +Q I R Sbjct: 814 VAMDQFNNSADAKVLFGSIKACGEGISL-VGASRVIILDVHLNPSVTRQAIGR-----AF 867 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 + G ++ VFVY L+A ++ + + K I Sbjct: 868 RPGQQKKVFVYRLVAADSPEVKFHETAFKKEVI 900 >gi|58803049|gb|AAW82648.1| ATP-dependent RNA helicase [Myxococcus xanthus DK 1622] Length = 1017 Score = 60.3 bits (145), Expect = 1e-07, Method: Composition-based stats. Identities = 28/165 (16%), Positives = 53/165 (32%), Gaps = 23/165 (13%) Query: 54 EKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRT----------LDKDPCTIQE 103 + L + + AA ++V L LQ + L + + Sbjct: 497 AFLGVLRGVWKTEPAAKVLVFTESRDTLDALQSELGREGVEALGYHGDLPLVERDRQVAR 556 Query: 104 WNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKR 163 + + + P + G G N Q+ + LV + L W +Q I R+ + G Sbjct: 557 FRDPEGPKVLLCTEVGGEGRNFQF-AHHLVHYDLPWSPATVEQRIGRLD-----RIGQTH 610 Query: 164 AVFVYYLIAQNTIDELVLQRLRTKSTIQ-------DLLLNALKKE 201 V ++ T+ VL L + D +L ++ Sbjct: 611 PVEIHVFDPAGTLASDVLMLLADAVGVFGETVGGLDAVLEEVEAR 655 >gi|211997722|gb|ACJ14807.1| putative phage-associated helicase [Candidatus Hamiltonella defensa] Length = 69 Score = 60.3 bits (145), Expect = 1e-07, Method: Composition-based stats. Identities = 19/48 (39%), Positives = 29/48 (60%) Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKET 202 R + G R VF+++L+ ++ID VL+ L K Q LL+ALKK+ Sbjct: 4 RLHRQGQTRPVFIHHLVMNDSIDITVLEALENKHITQKALLDALKKDI 51 >gi|261202002|ref|XP_002628215.1| DNA repair helicase [Ajellomyces dermatitidis SLH14081] gi|239590312|gb|EEQ72893.1| DNA repair helicase [Ajellomyces dermatitidis SLH14081] Length = 275 Score = 60.3 bits (145), Expect = 1e-07, Method: Composition-based stats. Identities = 24/115 (20%), Positives = 43/115 (37%), Gaps = 13/115 (11%) Query: 84 LQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEE 143 L+ RT KDP +L + G G++L N + LWW+ Sbjct: 14 LRARDKHIRTFSKDPAA---------RILICSLRTAGIGVDLT-ATNKCILVDLWWNEAM 63 Query: 144 HQQMIE---RIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 QQ +R + +R V ++ QN+ID+ + K+ + ++ Sbjct: 64 EQQACTCTLITAFSRIFRIRQQRNVEFVRIVVQNSIDDRIQLIQNEKTDGIEQVI 118 >gi|194214436|ref|XP_001915685.1| PREDICTED: E1A binding protein p400 [Equus caballus] Length = 3092 Score = 60.3 bits (145), Expect = 1e-07, Method: Composition-based stats. Identities = 25/172 (14%), Positives = 66/172 (38%), Gaps = 19/172 (11%) Query: 24 NSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDL 81 ++A + Q+ E + K++AL ++++K + +++ L Sbjct: 1827 HTAPYAQQLQQMTALRSLQFPELRLVQFDSGKLEALAILLQKLKSEGRRVLILSQMVLML 1886 Query: 82 ARLQK----------AFPQGRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGN 130 L+ + ++ ++ +N + +I S G++L + Sbjct: 1887 DILEMFLNFHYLTYIRIDENANSEQRQELMRSFNRDRRIFCAILSTHSRATGVSLVE-AD 1945 Query: 131 ILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQ 182 +VF+ + + E + G ++ V +Y L++ N+I+E +L+ Sbjct: 1946 AVVFYDNDLNPVMDAKAQEWCD-----RIGRRKDVHIYRLVSGNSIEEKLLK 1992 >gi|311270523|ref|XP_001927177.2| PREDICTED: e1A-binding protein p400 [Sus scrofa] Length = 2866 Score = 60.3 bits (145), Expect = 1e-07, Method: Composition-based stats. Identities = 26/172 (15%), Positives = 66/172 (38%), Gaps = 19/172 (11%) Query: 24 NSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIE--KANAAPIIVAYHFNSDL 81 ++A + Q+ E + K++AL V+++ ++ +++ L Sbjct: 1820 HTAPYAQQLQQMTALRSLQFPELRLVQFDSGKLEALAVLLQKLRSEGRRVLILSQMVLML 1879 Query: 82 ARLQK----------AFPQGRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGN 130 L+ + ++ ++ +N + +I S G++L + Sbjct: 1880 DILEMFLNFHYLTYIRIDENANSEQRQELMRSFNRDRRIFCALLSTHSRTTGVSLVE-AD 1938 Query: 131 ILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQ 182 +VF+ + + E + G +R V +Y L++ N+I+E +L+ Sbjct: 1939 AVVFYDNDLNPVMDAKAQEWCD-----RIGRRRDVHIYRLVSGNSIEEKLLK 1985 >gi|311270518|ref|XP_003132906.1| PREDICTED: e1A-binding protein p400-like [Sus scrofa] Length = 2832 Score = 60.3 bits (145), Expect = 1e-07, Method: Composition-based stats. Identities = 26/172 (15%), Positives = 66/172 (38%), Gaps = 19/172 (11%) Query: 24 NSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIE--KANAAPIIVAYHFNSDL 81 ++A + Q+ E + K++AL V+++ ++ +++ L Sbjct: 1820 HTAPYAQQLQQMTALRSLQFPELRLVQFDSGKLEALAVLLQKLRSEGRRVLILSQMVLML 1879 Query: 82 ARLQK----------AFPQGRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGN 130 L+ + ++ ++ +N + +I S G++L + Sbjct: 1880 DILEMFLNFHYLTYIRIDENANSEQRQELMRSFNRDRRIFCALLSTHSRTTGVSLVE-AD 1938 Query: 131 ILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQ 182 +VF+ + + E + G +R V +Y L++ N+I+E +L+ Sbjct: 1939 AVVFYDNDLNPVMDAKAQEWCD-----RIGRRRDVHIYRLVSGNSIEEKLLK 1985 >gi|328542136|ref|YP_004302245.1| Prophage LambdaMc01, helicase, SNF2 family [Polymorphum gilvum SL003B-26A1] gi|326411886|gb|ADZ68949.1| Prophage LambdaMc01, helicase, SNF2 family [Polymorphum gilvum SL003B-26A1] Length = 922 Score = 60.3 bits (145), Expect = 1e-07, Method: Composition-based stats. Identities = 28/143 (19%), Positives = 52/143 (36%), Gaps = 17/143 (11%) Query: 56 IKALEVIIEKANAAPIIVAYHFNSDLARLQKAFP-----QGRTLDKD------PCTIQEW 104 + L + + I++ + + L + QG + + + + Sbjct: 507 LDGLGTLWRQNPNEKIVIFATYLGTVDLLAREIEATYPGQGVVVLRGGDHGAKAAAERRF 566 Query: 105 NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA 164 P + A+ G+NLQ+ IL F L W+ + +Q I RI + G Sbjct: 567 KLKDGPRVLVCTAAGREGINLQF-ARILFNFDLPWNPMDMEQRIGRI-----HRYGQAHT 620 Query: 165 VFVYYLIAQNTIDELVLQRLRTK 187 VY L+ +TI+ + L K Sbjct: 621 AQVYNLVLSDTIEGRIFLLLDDK 643 >gi|302801027|ref|XP_002982270.1| hypothetical protein SELMODRAFT_421707 [Selaginella moellendorffii] gi|300149862|gb|EFJ16515.1| hypothetical protein SELMODRAFT_421707 [Selaginella moellendorffii] Length = 825 Score = 60.3 bits (145), Expect = 1e-07, Method: Composition-based stats. Identities = 15/60 (25%), Positives = 27/60 (45%), Gaps = 5/60 (8%) Query: 131 ILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 LV W+ Q++ RI + G + V +Y L++ +I+E + QR K + Sbjct: 666 RLVLVDPDWNPANDAQVMSRIW-----REGQPKPVKIYRLLSTGSIEEKIYQRQIMKKDL 720 >gi|164660106|ref|XP_001731176.1| hypothetical protein MGL_1359 [Malassezia globosa CBS 7966] gi|159105076|gb|EDP43962.1| hypothetical protein MGL_1359 [Malassezia globosa CBS 7966] Length = 1126 Score = 60.3 bits (145), Expect = 1e-07, Method: Composition-based stats. Identities = 27/155 (17%), Positives = 56/155 (36%), Gaps = 18/155 (11%) Query: 44 EEKHWKEVHDEKIKA-LEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLD------- 95 ++ K+ L II+ ++V ++ L L A R Sbjct: 899 DDVRVHTSTSTKLNMMLSEIIDAVQDEKVLVFSTLDNVLYELANALELLRIPFLFYVSGM 958 Query: 96 ----KDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERI 151 ++ ++ I L + G GL+L + + ++F W + Q ++R Sbjct: 959 PQHLRNAYANMFMHKSNIRCLLMTTSVGGRGLDL-HCASRVIFAEPVWHWDLESQAVKRA 1017 Query: 152 GVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRT 186 + G R V V + ++T +E + +R +T Sbjct: 1018 W-----RMGQTRRVLVSTYVMRHTFEERITERKQT 1047 >gi|310831061|ref|YP_003969704.1| putative superfamily II helicase [Cafeteria roenbergensis virus BV-PW1] gi|309386245|gb|ADO67105.1| putative superfamily II helicase [Cafeteria roenbergensis virus BV-PW1] Length = 773 Score = 60.3 bits (145), Expect = 1e-07, Method: Composition-based stats. Identities = 25/137 (18%), Positives = 53/137 (38%), Gaps = 18/137 (13%) Query: 54 EKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTL--------DKDPCTIQEWN 105 KI + II+K + I+ H++ + + F K +I+++ Sbjct: 642 TKISYVMDIIKKEPDSRFIIFSHWDKMFKMISQVFDTNNIKYVNIKGNMHKIANSIRKFK 701 Query: 106 -EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERI--GVTRQRQAGFK 162 + +I ++ G NL +I+ L+ + + I V R + G Sbjct: 702 IDNEIKVIMLSSDKANSGCNLTEANHIIF-------LDNYYLTNDTIKQSVGRAHRIGQT 754 Query: 163 RAVFVYYLIAQNTIDEL 179 + + V LI +NT+++ Sbjct: 755 KKLKVTRLIMENTLEDK 771 >gi|297567701|ref|YP_003686672.1| hypothetical protein Mesil_3352 [Meiothermus silvanus DSM 9946] gi|296852150|gb|ADH65164.1| hypothetical protein Mesil_3352 [Meiothermus silvanus DSM 9946] Length = 919 Score = 60.3 bits (145), Expect = 1e-07, Method: Composition-based stats. Identities = 31/153 (20%), Positives = 60/153 (39%), Gaps = 23/153 (15%) Query: 53 DEKIKALEVIIE---KANAAPIIVAYHFNSDLARLQKAFP------------QGRTLDKD 97 D K++AL +++ + ++V + L L ++ P + +++ Sbjct: 462 DSKLEALIELLKDPLRLGQGRVLVFTRYKDTLEHLLQSLPLALSQPVFGVHGEMSERERE 521 Query: 98 PCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 + +++ K +L A GLNLQ+ LV + L W+ +Q RI Sbjct: 522 E-VLLAFSQQKQAVLVA-TDVFSEGLNLQHYAARLVHYDLPWNPNRLEQRNGRID----- 574 Query: 158 QAGFKRA-VFVYYLIAQNTIDELVLQRLRTKST 189 + G V + L Q + D V + L K+ Sbjct: 575 RFGQPEPTVRLRTLYYQRSFDVAVFKLLLEKAE 607 >gi|326204500|ref|ZP_08194357.1| SNF2-related protein [Clostridium papyrosolvens DSM 2782] gi|325985293|gb|EGD46132.1| SNF2-related protein [Clostridium papyrosolvens DSM 2782] Length = 890 Score = 60.3 bits (145), Expect = 1e-07, Method: Composition-based stats. Identities = 31/153 (20%), Positives = 62/153 (40%), Gaps = 24/153 (15%) Query: 53 DEKIKALEVII----EKANAAPIIVAYHFNSDLARLQKAFPQGRT----------LDKDP 98 D K + L I + +I+ F + L++ +++ Sbjct: 452 DTKAEKLLEFIYKIQMEYEDFKVIIFTEFVATQQFLKEYLESKGFKIATLNGSMDIEERN 511 Query: 99 CTIQEWNE-GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 T++E+ E I + G GLNLQ+ NI++ + L W+ + +Q I R+ Sbjct: 512 TTLKEFKERADI---LISTDAGGEGLNLQFS-NIVINYDLPWNPMKIEQRIGRVD----- 562 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 + G +R V+V+ + T++ + + L K Sbjct: 563 RIGQQRDVYVFNFMLSETVEFRIREVLEEKLAT 595 >gi|294950395|ref|XP_002786608.1| snf2 histone linker phd ring helicase, putative [Perkinsus marinus ATCC 50983] gi|239900900|gb|EER18404.1| snf2 histone linker phd ring helicase, putative [Perkinsus marinus ATCC 50983] Length = 1367 Score = 60.3 bits (145), Expect = 1e-07, Method: Composition-based stats. Identities = 20/101 (19%), Positives = 41/101 (40%), Gaps = 8/101 (7%) Query: 98 PCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 ++ + +G++ L AS G GLNL + + + Q RI Sbjct: 1262 SKMVERFFDGRVRTLLCPLASAGQGLNLTVASH-AILLEPPPKYSQTAQAAARIW----- 1315 Query: 158 QAGFKRAVFVYYLIAQNTIDE--LVLQRLRTKSTIQDLLLN 196 + G ++ V++ ++ T++E L R + +LL + Sbjct: 1316 RLGQQKEATVWHFVSCRTVEEAMWTLSRRADQEEDAELLRD 1356 >gi|167518191|ref|XP_001743436.1| hypothetical protein [Monosiga brevicollis MX1] gi|163778535|gb|EDQ92150.1| predicted protein [Monosiga brevicollis MX1] Length = 980 Score = 60.3 bits (145), Expect = 1e-07, Method: Composition-based stats. Identities = 37/165 (22%), Positives = 63/165 (38%), Gaps = 22/165 (13%) Query: 45 EKHWKEVHDEK-IKALEVIIEKANAAPIIVAYHFN--SDLARLQKAFPQGRTLDKDPCTI 101 EK K + ALE ++ A H+ D RL + + I Sbjct: 415 EKVVLLTQSAKTLDALEPMLAAGTKAG----RHWVMPDDYTRL----DGTESASERHQRI 466 Query: 102 QEW-NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 + + ++ LL A ++L + ++ F WD I RI + G Sbjct: 467 EAFSTSPRMGLLIACTKIGRLNIDLTT-ASRVIIFDAAWDALSDTSAIARI-----YRYG 520 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIHV 205 R VF+Y L+A T+D L+ + K+ L N +KK+++ Sbjct: 521 QTRPVFIYRLVAAGTLDVLLHRPQSNKA----RLTNYVKKDSLET 561 >gi|330956047|gb|EGH56307.1| SNF2-related:helicase [Pseudomonas syringae Cit 7] Length = 90 Score = 60.3 bits (145), Expect = 1e-07, Method: Composition-based stats. Identities = 22/79 (27%), Positives = 34/79 (43%), Gaps = 6/79 (7%) Query: 118 SCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 + G G NL N + F L W Q +R + G R V V +A++TID Sbjct: 3 AAGTGYNLT-AANYVFFLGLPWTPGLQDQAEDR-----AYRNGQLRLVVVKIPLAEDTID 56 Query: 178 ELVLQRLRTKSTIQDLLLN 196 + + Q L K + L++ Sbjct: 57 QQLWQMLMDKRALASDLID 75 >gi|85089833|ref|XP_958131.1| hypothetical protein NCU07358 [Neurospora crassa OR74A] gi|28919457|gb|EAA28895.1| predicted protein [Neurospora crassa OR74A] Length = 1085 Score = 60.3 bits (145), Expect = 2e-07, Method: Composition-based stats. Identities = 28/150 (18%), Positives = 64/150 (42%), Gaps = 18/150 (12%) Query: 49 KEVHDEKIKALEV-IIEKANAAPIIVAYHFNS---DLARLQKA-------FPQGRTLDKD 97 K+ L II+ A I+V Y ++ LA + + + +G T ++ Sbjct: 773 ISTASAKLSYLVDQIIQHEEAEQILVFYENDNVAYYLAEVLEVLGIQHLIYAKGITSERK 832 Query: 98 PCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 + + + KI ++ + +GL+++ + + F + + + Q I R Sbjct: 833 NHHLATFTLKPKIRVMLMDVSQAAYGLDMKT-ASRIYFINPVLNPQVGAQAIGR-----A 886 Query: 157 RQAGFKRAVFVYYLIAQNTIDELVLQRLRT 186 R+ ++ V V L+ + +IDE++++R Sbjct: 887 RRISQQKPVTVETLVLRGSIDEVIVRRREE 916 >gi|312792927|ref|YP_004025850.1| helicase domain-containing protein [Caldicellulosiruptor kristjanssonii 177R1B] gi|312180067|gb|ADQ40237.1| helicase domain protein [Caldicellulosiruptor kristjanssonii 177R1B] Length = 1111 Score = 60.3 bits (145), Expect = 2e-07, Method: Composition-based stats. Identities = 30/149 (20%), Positives = 65/149 (43%), Gaps = 22/149 (14%) Query: 53 DEKIKALEVIIEKA----NAAPIIVAYHFNSDLARLQKAFPQ----------GRTLDKDP 98 + K+ L+ +I++ ++V L L + + G +D+ Sbjct: 469 ETKLVRLKEVIDQERIRETGTKLLVFTESRDTLEYLAEKLKEWGYAVVTIHGGMNMDERI 528 Query: 99 CTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQ 158 E+ + K ++ A + G G+NLQ+ ++V + + W+ +Q + RI + Sbjct: 529 RAEHEF-KNKAQVMVA-TEAAGEGINLQF-CWLMVNYDIPWNPNRLEQRMGRI-----HR 580 Query: 159 AGFKRAVFVYYLIAQNTIDELVLQRLRTK 187 G + V +Y L++ +T + +LQ+L K Sbjct: 581 YGQESEVHIYNLVSGDTKEGQILQKLFQK 609 >gi|219666703|ref|YP_002457138.1| helicase [Desulfitobacterium hafniense DCB-2] gi|219536963|gb|ACL18702.1| helicase domain protein [Desulfitobacterium hafniense DCB-2] Length = 1168 Score = 60.3 bits (145), Expect = 2e-07, Method: Composition-based stats. Identities = 36/192 (18%), Positives = 68/192 (35%), Gaps = 22/192 (11%) Query: 27 SKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQK 86 + K ++AN E++ W E+ + +I+ L L Sbjct: 457 ATLKKLERMANDVRQSGEDRKWDELSRLLQDNDTMFGTDGLREKLIIFTEHRDTLRYLTD 516 Query: 87 AFP-------------QGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILV 133 G D+ + + + K + + G G+NLQ +++V Sbjct: 517 KIRSLLGNEEAVVTIHGGLLRDERRKVEELFKQDKEVRILIATDAAGEGINLQR-AHLMV 575 Query: 134 FFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDL 193 + L W+ +Q RI + G ++ L+++ T + +V QRL K Q+ Sbjct: 576 NYDLPWNPNRLEQRFGRI-----HRIGQTEVCHLWNLVSKETREGMVFQRLFEKLE-QER 629 Query: 194 LLNALKKETIHV 205 ALK + V Sbjct: 630 --EALKGKVFDV 639 >gi|302653761|ref|XP_003018701.1| SNF2 family helicase, putative [Trichophyton verrucosum HKI 0517] gi|291182365|gb|EFE38056.1| SNF2 family helicase, putative [Trichophyton verrucosum HKI 0517] Length = 519 Score = 60.3 bits (145), Expect = 2e-07, Method: Composition-based stats. Identities = 24/151 (15%), Positives = 55/151 (36%), Gaps = 31/151 (20%) Query: 53 DEKIKALEVII----EKANAAPIIVAYHFNSDLARL---------QKAFPQGRTLDKDPC 99 K++A+++ I +++ I + F ++ + + G+ + Sbjct: 262 SAKLRAVKMFISNWLKESPDIKITIFTQFLGMISAIASVCEAEGWRYTTLCGKLHHRTRH 321 Query: 100 T-IQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQ 158 I+ + E + +L + + G GL+L + + LWW+ QQ Sbjct: 322 ANIKRFREENVSILISSLKAGGVGLDLTM-ASKCILVDLWWNEAIEQQ------------ 368 Query: 159 AGFKRAVFVYYLIAQNTIDELVLQRLRTKST 189 V + + +NT+D+ + KS Sbjct: 369 ----NDVEIIRICVENTVDDRLQLIQSRKSE 395 >gi|113476663|ref|YP_722724.1| helicase-like [Trichodesmium erythraeum IMS101] gi|113477649|ref|YP_723710.1| helicase-like [Trichodesmium erythraeum IMS101] gi|110167711|gb|ABG52251.1| helicase-like [Trichodesmium erythraeum IMS101] gi|110168697|gb|ABG53237.1| helicase-like [Trichodesmium erythraeum IMS101] Length = 1065 Score = 60.3 bits (145), Expect = 2e-07, Method: Composition-based stats. Identities = 31/176 (17%), Positives = 63/176 (35%), Gaps = 30/176 (17%) Query: 53 DEKIKALEVII--EKANAAPIIVAYHFNSDLARLQKAFPQ------------GRTLDKD- 97 D K+ + E + +I+ + + L++ G + +D Sbjct: 758 DTKLSHFITTLRTELIDRDSVIIFTQYTDTMDYLRRTLKDLYGSQIACYSGRGGEVYQDQ 817 Query: 98 -------PCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 Q++ G I +L S GLNLQ G +++ + + W+ +Q I R Sbjct: 818 KWCLVPKEKIKQKFRAGSIKILLC-TESASEGLNLQTCG-VIINYDMPWNPMRVEQRIGR 875 Query: 151 IGVTRQRQAGFKRA-VFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIHV 205 + + G V +Y T++ V ++LR + ++ L+ V Sbjct: 876 LD-----RIGQFYPTVRIYNFYYDGTVEAKVYKKLRDRIDTFQNIVGNLQPILAKV 926 >gi|297693490|ref|XP_002824051.1| PREDICTED: e1A-binding protein p400-like [Pongo abelii] Length = 3025 Score = 60.3 bits (145), Expect = 2e-07, Method: Composition-based stats. Identities = 25/172 (14%), Positives = 66/172 (38%), Gaps = 19/172 (11%) Query: 24 NSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDL 81 ++A + Q + E + K++AL ++++K + +++ L Sbjct: 1740 HAAPYFQQLRQTTVPRLLQFPELRLVQFDSGKLEALAILLQKLKSEGRRVLILSQMILML 1799 Query: 82 ARLQK----------AFPQGRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGN 130 L+ + + ++ ++ +N + +I S G+NL + Sbjct: 1800 DILEMFLNFHYLTYVRIDENASSEQRQELMRSFNRDRRIFCAILSTHSRTTGINLVE-AD 1858 Query: 131 ILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQ 182 +VF+ + + E + G + + +Y L++ N+I+E +L+ Sbjct: 1859 TVVFYDNDLNPVMDAKAQEWCD-----RIGRCKDIHIYRLVSGNSIEEKLLK 1905 >gi|302764876|ref|XP_002965859.1| hypothetical protein SELMODRAFT_84719 [Selaginella moellendorffii] gi|300166673|gb|EFJ33279.1| hypothetical protein SELMODRAFT_84719 [Selaginella moellendorffii] Length = 429 Score = 60.3 bits (145), Expect = 2e-07, Method: Composition-based stats. Identities = 23/87 (26%), Positives = 41/87 (47%), Gaps = 8/87 (9%) Query: 111 LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYL 170 ++ +CG G++L GG+ +V W+ +Q + R + G K+ V+VY L Sbjct: 289 VILVSIKACGEGISL-VGGSRVVVLDTAWNPSTVRQAVSR-----AFRIGQKKKVYVYRL 342 Query: 171 IAQNTIDELV--LQRLRTKSTIQDLLL 195 + NT++ V L+R K + L Sbjct: 343 LVGNTLEHEVEKLRRSMRKDFLAMALF 369 >gi|302509586|ref|XP_003016753.1| SNF2 family helicase, putative [Arthroderma benhamiae CBS 112371] gi|291180323|gb|EFE36108.1| SNF2 family helicase, putative [Arthroderma benhamiae CBS 112371] Length = 2114 Score = 60.3 bits (145), Expect = 2e-07, Method: Composition-based stats. Identities = 33/163 (20%), Positives = 60/163 (36%), Gaps = 30/163 (18%) Query: 53 DEKIKALEVIIEKANAAP----IIVAYHFNSDLARLQKAFPQGRTL-------DKDPCT- 100 K A+ ++E P +++ F + KA D+ P + Sbjct: 1918 SSKFTAVIDLLEDTEKVPADDQVLLFIQFPELMDAASKALQSVSIPHTVIQPGDRTPTSK 1977 Query: 101 IQEWNEGKIPL----LFAHPAS-CGHGLNLQYGGNILVFFSLWWDLEEHQ------QMIE 149 I E+ GK + L + GLNLQ N ++FF ++ Q I Sbjct: 1978 ISEFQNGKESVKSKVLILNLGDVTASGLNLQN-ANHIIFFGPLVSRSQYDYDSGMAQAIG 2036 Query: 150 RIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQD 192 R R+ G + V +Y+++A T++ + + R K + Sbjct: 2037 R-----SRRYGQLKHVHIYHVLALRTVEVNIFE-QRRKQYLAK 2073 >gi|169852446|ref|XP_001832907.1| hypothetical protein CC1G_10583 [Coprinopsis cinerea okayama7#130] gi|116506042|gb|EAU88937.1| hypothetical protein CC1G_10583 [Coprinopsis cinerea okayama7#130] Length = 1280 Score = 60.3 bits (145), Expect = 2e-07, Method: Composition-based stats. Identities = 21/112 (18%), Positives = 38/112 (33%), Gaps = 6/112 (5%) Query: 83 RLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLE 142 R + Q ++ + K + GLNL + ++F W + Sbjct: 1080 RFLRFTTQVSPQIREQLVLTFETSEKYRVFLMELKHGARGLNL-VSASRVIFCEPVWQAD 1138 Query: 143 EHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 Q I+R+ + G R + V L + T +E ++ R D L Sbjct: 1139 VESQAIKRV-----HRIGQTRPITVKTLAIKGTHEENMVARRHALHNTHDKL 1185 >gi|302802704|ref|XP_002983106.1| hypothetical protein SELMODRAFT_117561 [Selaginella moellendorffii] gi|300149259|gb|EFJ15915.1| hypothetical protein SELMODRAFT_117561 [Selaginella moellendorffii] Length = 429 Score = 60.3 bits (145), Expect = 2e-07, Method: Composition-based stats. Identities = 23/87 (26%), Positives = 41/87 (47%), Gaps = 8/87 (9%) Query: 111 LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYL 170 ++ +CG G++L GG+ +V W+ +Q + R + G K+ V+VY L Sbjct: 289 VILVSIKACGEGISL-VGGSRVVVLDTAWNPSTVRQAVSR-----AFRIGQKKKVYVYRL 342 Query: 171 IAQNTIDELV--LQRLRTKSTIQDLLL 195 + NT++ V L+R K + L Sbjct: 343 LVGNTLEHEVEKLRRSMRKDFLAMALF 369 >gi|25148958|ref|NP_498401.2| hypothetical protein C16A3.1 [Caenorhabditis elegans] gi|20451185|gb|AAM22028.1|U41534_4 Hypothetical protein C16A3.1b [Caenorhabditis elegans] Length = 686 Score = 60.3 bits (145), Expect = 2e-07, Method: Composition-based stats. Identities = 29/149 (19%), Positives = 57/149 (38%), Gaps = 22/149 (14%) Query: 58 ALEVIIE-----KANAAPIIVAYHFNSDLARLQKAFPQ---------GRTLDKDPCTI-- 101 E I+E A +++ H L +Q + G+T + Sbjct: 474 VCEHILENYFYPDAPPRKVLIFAHHQIVLDTIQVEVNKRKLGSIRIDGKTPSHRRTALCD 533 Query: 102 QEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGF 161 + I + + G G+ L +++VF + ++ Q +R + G Sbjct: 534 SFQTDDNIRVAVLSITAAGVGITLT-AASVVVFAEIHFNPGYLVQAEDR-----AHRVGQ 587 Query: 162 KRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 K +VFV YLIA+ T D+++ ++ K + Sbjct: 588 KDSVFVQYLIAKKTADDVMWNMVQQKLDV 616 >gi|217968742|ref|YP_002353976.1| helicase [Thauera sp. MZ1T] gi|217506069|gb|ACK53080.1| helicase domain protein [Thauera sp. MZ1T] Length = 1037 Score = 60.3 bits (145), Expect = 2e-07, Method: Composition-based stats. Identities = 36/208 (17%), Positives = 75/208 (36%), Gaps = 20/208 (9%) Query: 5 HKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKAL----E 60 + + E++ +L G+ + + L A + E D K L + Sbjct: 468 EELESEVF-ELYGDAEDNEKRPNLGALLRTLVGIARRVGDH-TALESVDSKYDMLVRNLK 525 Query: 61 VIIEKANAAPIIVAYHFNSDLA----RLQKAFPQGRTLDKDPC---TIQEWNEGKIPLLF 113 I++ + + L RL Q L ++ + + P + Sbjct: 526 QYWAAYPGKKIVLFSFYRNTLHYLARRLAAEGIQSAVLHGGMDKHGVLRHFESTEGPDIL 585 Query: 114 AHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFK-RAVFVYYLIA 172 G++LQ+ ++L+ + L W+ +Q I RI + G + + ++ I Sbjct: 586 ISSEVASEGVDLQFS-SLLINYDLPWNPARIEQRIGRID-----RIGQEAEKILIWNFIY 639 Query: 173 QNTIDELVLQRLRTKSTIQDLLLNALKK 200 +TIDE + RL + I L +++ Sbjct: 640 THTIDERIYDRLLERLDIFRQALGSMEA 667 >gi|189501403|ref|YP_001960873.1| helicase domain-containing protein [Chlorobium phaeobacteroides BS1] gi|189496844|gb|ACE05392.1| helicase domain protein [Chlorobium phaeobacteroides BS1] Length = 774 Score = 60.3 bits (145), Expect = 2e-07, Method: Composition-based stats. Identities = 21/82 (25%), Positives = 40/82 (48%), Gaps = 7/82 (8%) Query: 106 EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 + + +L A + G G+NLQ +++V + L W+ +Q RI + G Sbjct: 163 DPDVQVLLA-TDAAGEGINLQR-AHLMVNYDLPWNPNRLEQRFGRI-----HRIGQTEVC 215 Query: 166 FVYYLIAQNTIDELVLQRLRTK 187 +++ L+A +T + V +RL K Sbjct: 216 YLWNLVADDTREGDVYRRLLEK 237 >gi|330920074|ref|XP_003298878.1| hypothetical protein PTT_09713 [Pyrenophora teres f. teres 0-1] gi|311327723|gb|EFQ93020.1| hypothetical protein PTT_09713 [Pyrenophora teres f. teres 0-1] Length = 1280 Score = 60.0 bits (144), Expect = 2e-07, Method: Composition-based stats. Identities = 29/163 (17%), Positives = 59/163 (36%), Gaps = 20/163 (12%) Query: 45 EKHWKEVHDEKIKALEVIIEKANAA-PIIVAYHFNSDLARLQKAFP--------QGRTLD 95 K+ L + + A II+ Y + + + RTL+ Sbjct: 1001 NTRLVGTTSSKLTYLLDKVMQHQATEKIIIFYDGDDAAFYIAQCLELMYVNHRIYARTLN 1060 Query: 96 KD--PCTIQEWNE-GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIG 152 ++ +NE + +L A GLNL ++++ + Q I+R Sbjct: 1061 NTLRSEYVRLFNEHPDVRVLLIDVACGALGLNL-NAASVVLIVNPINRPGLEAQAIKR-- 1117 Query: 153 VTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLR--TKSTIQDL 193 + G + V V L+ +NTI+ + R + +++ Q+ Sbjct: 1118 ---SHRIGQTKEVIVETLVLENTIEHAIFNRAKKMSRADHQEA 1157 >gi|76802571|ref|YP_327579.1| ATP-dependent helicase [Natronomonas pharaonis DSM 2160] gi|76558436|emb|CAI50027.1| ATP-dependent helicase [Natronomonas pharaonis DSM 2160] Length = 958 Score = 60.0 bits (144), Expect = 2e-07, Method: Composition-based stats. Identities = 25/158 (15%), Positives = 61/158 (38%), Gaps = 20/158 (12%) Query: 47 HWKEVHDEKIKAL--EVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD------- 97 + D K++ L E + + +I+ + L L++ ++ + + Sbjct: 480 RVTKTRDAKLQRLLDETLPNRFQYPRVIIFTKYVDTLEYLEEQIKDSQSDETEVFTLHGS 539 Query: 98 ---PCTIQEWNEGKIPL--LFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIG 152 + + E + + G+NLQ+ N ++ + L W+ +Q RI Sbjct: 540 LNEAQRKERFKEFEDSTRGVLIATDVISEGMNLQHAANQIIHYELPWNPNRLEQRNGRID 599 Query: 153 VTRQRQAGFKRA-VFVYYLIAQNTIDELVLQRLRTKST 189 + G K V + ++ ++ +D +L++L K+ Sbjct: 600 -----RYGQKNDEVVIRTMVVEDQMDVAILEKLVQKAN 632 >gi|317485751|ref|ZP_07944620.1| hypothetical protein HMPREF0179_01974 [Bilophila wadsworthia 3_1_6] gi|316922984|gb|EFV44201.1| hypothetical protein HMPREF0179_01974 [Bilophila wadsworthia 3_1_6] Length = 476 Score = 60.0 bits (144), Expect = 2e-07, Method: Composition-based stats. Identities = 32/170 (18%), Positives = 63/170 (37%), Gaps = 23/170 (13%) Query: 48 WKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQG------------RTLD 95 + + + +I L + + + +I+ ++ +A L +A P Sbjct: 303 VRRLRNRRIDTLFNELRQFRTSHVIIWANYLESVAALNEALPTAFPQIPVYTLHGRVPAT 362 Query: 96 KDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTR 155 + I W + + +L A + G+GL L + + F+S W Q +R Sbjct: 363 ERAAKIDLW-KKRGGVLVATQGTGGYGLTLTES-HQVFFYSENWRYALRLQAEDRC---- 416 Query: 156 QRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIHV 205 + G K +V L ++ DE + L K+ L LK+E + Sbjct: 417 -HRIGQKDSVCYVTLQGESRFDERIRSALARKADA----LEELKREVRRL 461 >gi|13365849|dbj|BAB39310.1| hypothetical protein [Macaca fascicularis] Length = 675 Score = 60.0 bits (144), Expect = 2e-07, Method: Composition-based stats. Identities = 25/172 (14%), Positives = 66/172 (38%), Gaps = 19/172 (11%) Query: 24 NSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDL 81 ++A + Q + E + K++AL ++++K + +++ L Sbjct: 11 HAAPYFQQLRQTTAPRLLQFPELRLVQFDSGKLEALAILLQKLKSEGRRVLILSQMILML 70 Query: 82 ARLQK----------AFPQGRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGN 130 L+ + + ++ ++ +N + +I S G+NL + Sbjct: 71 DILEMFLNFHYLTYVRIDENASSEQRQELMRSFNRDRRIFCAILSTHSRTTGINLVE-AD 129 Query: 131 ILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQ 182 +VF+ + + E + G + + +Y L++ N+I+E +L+ Sbjct: 130 TVVFYDNDLNPVMDAKAQEWCD-----RIGRCKDIHIYRLVSGNSIEEKLLK 176 >gi|218473432|emb|CAV31142.1| hypothetical protein [Streptococcus pneumoniae] Length = 1315 Score = 60.0 bits (144), Expect = 2e-07, Method: Composition-based stats. Identities = 21/83 (25%), Positives = 36/83 (43%), Gaps = 4/83 (4%) Query: 95 DKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 +K ++ N G++ +L A G GLN+Q + + W + QQ RI Sbjct: 1234 EKKNSLSRKVNAGEVRILLASTEKGGTGLNVQSKMKAVHHLDVPWRPSDIQQRNGRII-- 1291 Query: 155 RQRQAGFKRAVFVYYLIAQNTID 177 RQ + V +Y+ I + + D Sbjct: 1292 --RQGNENKEVDIYHYITKGSFD 1312 >gi|118580295|ref|YP_901545.1| helicase domain-containing protein [Pelobacter propionicus DSM 2379] gi|118503005|gb|ABK99487.1| helicase domain protein [Pelobacter propionicus DSM 2379] Length = 1172 Score = 60.0 bits (144), Expect = 2e-07, Method: Composition-based stats. Identities = 37/218 (16%), Positives = 73/218 (33%), Gaps = 33/218 (15%) Query: 5 HKFQRELYCDLQGENIEAFNSASKTVKC---LQLANGAVYYDEEKHWKEVHDEKIKALEV 61 + + Y + ++ +A + + + G V D K + L Sbjct: 431 DEMGDDEYERFEEAVVDQATAAQTIQELEVEIHILEGLVN-QASDVVHSGQDRKWEELSN 489 Query: 62 II--------EKANAAPIIVAYHFNSDLARLQKAFPQ-------------GRTLDKDPCT 100 ++ + +I+ L L G D Sbjct: 490 LLQNTPEMRDKDGRQRKLIIFTEHKDTLHYLVMKIRGLIGSEDSVVTIHGGVKRDDRRKI 549 Query: 101 IQEW-NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQA 159 + + N+ ++ +L A + G G+NLQ N++V + L W+ +Q RI + Sbjct: 550 QELFRNDPEVRVLVA-TDAAGEGINLQN-ANLMVNYDLPWNPNRLEQRFGRI-----HRI 602 Query: 160 GFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 G + ++ ++A T + V QRL K I+ L Sbjct: 603 GQDQVCHLWNMVANETREGDVFQRLLDKLEIERQALGG 640 >gi|119487812|ref|ZP_01621321.1| hypothetical protein L8106_30060 [Lyngbya sp. PCC 8106] gi|119455645|gb|EAW36782.1| hypothetical protein L8106_30060 [Lyngbya sp. PCC 8106] Length = 1084 Score = 60.0 bits (144), Expect = 2e-07, Method: Composition-based stats. Identities = 34/157 (21%), Positives = 53/157 (33%), Gaps = 23/157 (14%) Query: 53 DEKIKAL----EVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGK 108 D K+ L + I + A I++ + KA + + N + Sbjct: 505 DPKLDQLIREIQTIRTQEPDANILIYTEYIDSQKAAVKALEKAEI--GTVIAMSGQNSNE 562 Query: 109 IP------------LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 I L+ + GLNLQ + L+ L ++ +Q RI Sbjct: 563 IRSQMTSRFCREANLVLISTDTAAEGLNLQQKCHHLIHLELPFNPNRLEQRNGRID---- 618 Query: 157 RQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDL 193 + G K V YL Q T +E +L RL K Q Sbjct: 619 -RFGQKFNPEVRYLYLQGTFEERILLRLIAKYERQRS 654 >gi|323454234|gb|EGB10104.1| hypothetical protein AURANDRAFT_15050 [Aureococcus anophagefferens] Length = 80 Score = 60.0 bits (144), Expect = 2e-07, Method: Composition-based stats. Identities = 23/85 (27%), Positives = 39/85 (45%), Gaps = 6/85 (7%) Query: 111 LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYL 170 +L S G GLN+ N +VF W++ + H Q R + G + V V + Sbjct: 1 VLLMTVHSGGTGLNITR-ANHVVFLDRWFNPQVHFQAQARC-----HRIGQDKEVDVSFF 54 Query: 171 IAQNTIDELVLQRLRTKSTIQDLLL 195 A T+DE++ + + K D++L Sbjct: 55 DATCTLDEVMAEINKLKEGNADVVL 79 >gi|323448194|gb|EGB04096.1| hypothetical protein AURANDRAFT_33074 [Aureococcus anophagefferens] Length = 79 Score = 60.0 bits (144), Expect = 2e-07, Method: Composition-based stats. Identities = 19/76 (25%), Positives = 34/76 (44%), Gaps = 6/76 (7%) Query: 122 GLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVL 181 G+ L G N ++ + W+ + +Q RI + G RA V L+ + TI+E ++ Sbjct: 10 GVTL-IGANFMMLLNPSWNPAQDEQAAMRI-----HRIGQSRACTVIRLVGRGTIEETIV 63 Query: 182 QRLRTKSTIQDLLLNA 197 R K + +L Sbjct: 64 GRQAEKDGLCAILTQG 79 >gi|78190717|gb|ABB29680.1| SWI/SNF-related matrix-associated regulator of chromatin a5 [Leucosolenia sp. AR-2003] Length = 375 Score = 60.0 bits (144), Expect = 2e-07, Method: Composition-based stats. Identities = 29/167 (17%), Positives = 59/167 (35%), Gaps = 32/167 (19%) Query: 6 KFQRELYCDLQGENIEAFNSASKTVK------CLQL---ANGAVYYD--------EEKHW 48 K QR Y + ++I+ N A KT K +QL N +D Sbjct: 208 KMQRAWYTKILMKDIDVVNGAGKTDKMRLLNILMQLRKCCNHPYLFDGAEPGPPYTTDQH 267 Query: 49 KEVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQKAF---------PQGRTLDKD 97 + K+ L+ ++ + + +++ + ++ F G T +D Sbjct: 268 IVDNSGKLCLLDKLLVRLKEQGSRVLIFSQMTRMMDIMEDYFMWRGHNYCRLDGSTPHED 327 Query: 98 PCT-IQEWN--EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDL 141 I E+N + + + G G+NL ++++ F W+ Sbjct: 328 RQVSINEFNMPNSEKFVFMLSTRAGGLGINL-ATADVVILFDSDWNP 373 >gi|78190609|gb|ABB29626.1| SWI/SNF-related matrix-associated regulator of chromatin a5 [Priapulus caudatus] Length = 377 Score = 60.0 bits (144), Expect = 2e-07, Method: Composition-based stats. Identities = 33/174 (18%), Positives = 64/174 (36%), Gaps = 35/174 (20%) Query: 2 KQY---HKFQRELYCDLQGENIEAFNSASKTVKC------LQL---ANGAVYYD--EEKH 47 K Y K QR+ Y + ++I+ N A KT K +QL AN +D E Sbjct: 203 KIYIGLSKMQRDWYTKILMKDIDIVNGAGKTDKLRLLNILMQLRKCANHPYLFDGAEPGP 262 Query: 48 W------KEVHDEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQ---------KAFPQ 90 + K+ L+ ++++ + +++ L L+ Sbjct: 263 PYTTDMHLVTNGGKMVILDKLLQRLKVRGSRVLIFSQMTRMLDILEDYCAWRGYDYCRLD 322 Query: 91 GRTLDKDPC-TIQEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDL 141 G T +D +I E+N + + + G G+NL + ++ + W+ Sbjct: 323 GSTAHEDRQNSIDEFNRPGSEKFVFMLSTRAGGLGINL-ATADSVIMYDSDWNP 375 >gi|300726698|ref|ZP_07060130.1| helicase domain protein [Prevotella bryantii B14] gi|299776007|gb|EFI72585.1| helicase domain protein [Prevotella bryantii B14] Length = 901 Score = 60.0 bits (144), Expect = 2e-07, Method: Composition-based stats. Identities = 34/163 (20%), Positives = 65/163 (39%), Gaps = 28/163 (17%) Query: 58 ALEVIIEKANAAPIIVA----YHFNSDLARLQKAF----PQGRTLD------KDPCTIQE 103 L+ I ++ I++ R+ K F Q + D + + + Sbjct: 385 KLQEIWKQNKQERIVIFTERIATMKYLEERITKEFNLNSDQVKRFDGSLSDTEQEDMVND 444 Query: 104 W--NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGF 161 + + KI + S G+NL Y +I+ + + W L +Q RI + G Sbjct: 445 FAKEDSKIRVF-ISSDSGSQGVNLHYFCHIMFNYDIPWSLITLEQRNGRID-----RYGQ 498 Query: 162 KRAVFVYYLIAQNTI-----DELVLQRLRTK-STIQDLLLNAL 198 K+ +YYL+A++ D ++ +LR K + D L +A+ Sbjct: 499 KQTPVIYYLVAKSNRQDLKTDFRIIDKLRDKEQEVHDTLGDAM 541 >gi|121607110|ref|YP_994917.1| helicase domain-containing protein [Verminephrobacter eiseniae EF01-2] gi|121551750|gb|ABM55899.1| helicase domain protein [Verminephrobacter eiseniae EF01-2] Length = 443 Score = 60.0 bits (144), Expect = 2e-07, Method: Composition-based stats. Identities = 22/86 (25%), Positives = 37/86 (43%), Gaps = 6/86 (6%) Query: 102 QEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGF 161 + + + P + A+ G+NLQ+ IL F L W+ + +Q I RI + G Sbjct: 33 RRFRQKDGPRVLICTAAGREGINLQF-ARILFNFDLPWNPMDVEQRIGRI-----HRYGQ 86 Query: 162 KRAVFVYYLIAQNTIDELVLQRLRTK 187 VY + +TI+ + L K Sbjct: 87 NHTAQVYNFVLSDTIEGRIFLMLDEK 112 >gi|25148960|ref|NP_741192.1| hypothetical protein C16A3.1 [Caenorhabditis elegans] gi|60390949|sp|Q8MNV7|SMAL1_CAEEL RecName: Full=Putative SMARCAL1-like protein gi|20451186|gb|AAM22029.1|U41534_5 Hypothetical protein C16A3.1c [Caenorhabditis elegans] Length = 690 Score = 60.0 bits (144), Expect = 2e-07, Method: Composition-based stats. Identities = 29/149 (19%), Positives = 57/149 (38%), Gaps = 22/149 (14%) Query: 58 ALEVIIE-----KANAAPIIVAYHFNSDLARLQKAFPQ---------GRTLDKDPCTI-- 101 E I+E A +++ H L +Q + G+T + Sbjct: 478 VCEHILENYFYPDAPPRKVLIFAHHQIVLDTIQVEVNKRKLGSIRIDGKTPSHRRTALCD 537 Query: 102 QEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGF 161 + I + + G G+ L +++VF + ++ Q +R + G Sbjct: 538 SFQTDDNIRVAVLSITAAGVGITLT-AASVVVFAEIHFNPGYLVQAEDR-----AHRVGQ 591 Query: 162 KRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 K +VFV YLIA+ T D+++ ++ K + Sbjct: 592 KDSVFVQYLIAKKTADDVMWNMVQQKLDV 620 >gi|302852236|ref|XP_002957639.1| hypothetical protein VOLCADRAFT_98711 [Volvox carteri f. nagariensis] gi|300257051|gb|EFJ41305.1| hypothetical protein VOLCADRAFT_98711 [Volvox carteri f. nagariensis] Length = 1172 Score = 60.0 bits (144), Expect = 2e-07, Method: Composition-based stats. Identities = 30/146 (20%), Positives = 52/146 (35%), Gaps = 19/146 (13%) Query: 64 EKANAAPIIVAYHFNSDLARLQKAFPQGRTL----------DKDPCTIQEWNEGKI---P 110 + I+V H + L L+ Q + D+ ++E+ Sbjct: 564 DVEEGDKILVFAHHQTVLDTLEAHVKQRKVRYIRIDGSVPPDRREVAVREFQASDPHSPR 623 Query: 111 LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYL 170 + + G GL L +++VF L Q +R + G V VYYL Sbjct: 624 VALLALRAAGAGLTLT-AASVVVFAELDQTPALLAQAEDR-----AHRVGQGSHVHVYYL 677 Query: 171 IAQNTIDELVLQRLRTKSTIQDLLLN 196 + T+DE + + L TK + L+ Sbjct: 678 LGSGTLDERIWRMLETKKFVMGAALD 703 >gi|159124104|gb|EDP49222.1| SNF2 family helicase/ATPase, putative [Aspergillus fumigatus A1163] Length = 1483 Score = 60.0 bits (144), Expect = 2e-07, Method: Composition-based stats. Identities = 32/184 (17%), Positives = 64/184 (34%), Gaps = 31/184 (16%) Query: 36 ANGAVYYD-EEKHWKEVHD--------EKIKALEVII----EKANAAPIIVAYHFNSDLA 82 +N +Y D KE+ + KI L I E A I+ + + L Sbjct: 1221 SNSFIYTDISSGTLKEIKNIDLEASFGTKIDTLARHILWLREHDPGAKSIIFSQYKTFLE 1280 Query: 83 RLQKAFPQGRT----LDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLW 138 L AF + + +D + ++ + F H + GLNL + + Sbjct: 1281 VLGTAFSRFKIGYSSIDNADGIERFKSDPAVECFFLHAKAQSSGLNLVNATH-VFLCEPL 1339 Query: 139 WDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQR--------LRTKSTI 190 + Q I R+ + G R V+ + +T+++ + + + K + Sbjct: 1340 VNTAIELQAIARV-----HRIGQHRPTTVWMYLVSDTVEQSIYELSVSRRLAHIVQKEKV 1394 Query: 191 QDLL 194 ++ L Sbjct: 1395 KEAL 1398 >gi|17552194|ref|NP_498400.1| hypothetical protein C16A3.1 [Caenorhabditis elegans] gi|14573807|gb|AAK68177.1|U41534_2 Hypothetical protein C16A3.1a [Caenorhabditis elegans] Length = 687 Score = 60.0 bits (144), Expect = 2e-07, Method: Composition-based stats. Identities = 29/149 (19%), Positives = 57/149 (38%), Gaps = 22/149 (14%) Query: 58 ALEVIIE-----KANAAPIIVAYHFNSDLARLQKAFPQ---------GRTLDKDPCTI-- 101 E I+E A +++ H L +Q + G+T + Sbjct: 475 VCEHILENYFYPDAPPRKVLIFAHHQIVLDTIQVEVNKRKLGSIRIDGKTPSHRRTALCD 534 Query: 102 QEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGF 161 + I + + G G+ L +++VF + ++ Q +R + G Sbjct: 535 SFQTDDNIRVAVLSITAAGVGITLT-AASVVVFAEIHFNPGYLVQAEDR-----AHRVGQ 588 Query: 162 KRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 K +VFV YLIA+ T D+++ ++ K + Sbjct: 589 KDSVFVQYLIAKKTADDVMWNMVQQKLDV 617 >gi|330987023|gb|EGH85126.1| helicase domain-containing protein [Pseudomonas syringae pv. lachrymans str. M301315] Length = 1178 Score = 60.0 bits (144), Expect = 2e-07, Method: Composition-based stats. Identities = 37/203 (18%), Positives = 70/203 (34%), Gaps = 30/203 (14%) Query: 10 ELYCDLQGENIE--AFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKAN 67 E +L+ E A + + +V V ++K W+++ E+ + Sbjct: 460 ETIPELEAEIWSLKALEAQALSV---------VRSGKDKKWEQLSCLLQDTPEMYTSSGS 510 Query: 68 AAPIIVAYHFNSDLARLQKAFP-------------QGRTLDKDPCTIQEWNEGKIPLLFA 114 +I+ L L G D+ +E+ L+ Sbjct: 511 RRKLIIFTEHRDTLNYLVTRIGSMLGKPEAVVTIHGGTNRDERRMIQEEFRNNPNVLVLI 570 Query: 115 HPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQN 174 + G G+NLQ N++V + L W+ +Q RI + G ++ ++A Sbjct: 571 ATDAAGEGVNLQN-ANLMVNYDLPWNPNRLEQRFGRI-----HRIGQTEVCHLWNIVANE 624 Query: 175 TIDELVLQRLRTKSTIQDLLLNA 197 T + V Q+L K I+ L Sbjct: 625 TREGEVFQKLFDKMEIEKQALGG 647 >gi|71755757|ref|XP_828793.1| SNF2 DNA repair protein [Trypanosoma brucei TREU927] gi|70834179|gb|EAN79681.1| SNF2 DNA repair protein, putative [Trypanosoma brucei] Length = 952 Score = 60.0 bits (144), Expect = 2e-07, Method: Composition-based stats. Identities = 34/170 (20%), Positives = 66/170 (38%), Gaps = 20/170 (11%) Query: 40 VYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYH---------FNSDLARLQKAFPQ 90 VY D +W E EKI + ++ + ++ A+H + +D Sbjct: 437 VYSD---NWIE-SREKILDIVDLLLCKHGKIVLFAHHLNLLDCLTTYVNDKKVTWIRIDG 492 Query: 91 GRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 G ++ + +N+G + + +C G+ L G + +F L D+ QQ +R Sbjct: 493 GTPMNSRVELLSRFNDGDVSVALVGITACAVGVRLT-GASCALFAELPPDIGWMQQAEDR 551 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNT-IDELVLQRLRTKSTIQDLLLNALK 199 + + G K V +YY+I+ + D RL + + +K Sbjct: 552 L-----HRPGQKNHVILYYIISTGSFFDGAQFSRLSRSFQAVRRITDGVK 596 >gi|331013605|gb|EGH93661.1| SNF2-related:helicase [Pseudomonas syringae pv. tabaci ATCC 11528] Length = 316 Score = 60.0 bits (144), Expect = 2e-07, Method: Composition-based stats. Identities = 26/142 (18%), Positives = 53/142 (37%), Gaps = 18/142 (12%) Query: 55 KIKALEVIIEKAN-AAPIIVAYHFNSDLARLQKA----------FPQGRTLDKDPCTIQE 103 K++ + ++ + + +I+ + +A L++ + K I Sbjct: 179 KVRIVADLMAELDVDDKVILFCEYQESVASLREHCLAMGVGCVTLVGSDSPKKRQKAIDA 238 Query: 104 WNEG-KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFK 162 + + + ++ G G NL N + F L W Q +R + G Sbjct: 239 FQQDQDCRVFIGTRSAAGTGYNLT-AANYVFFLGLPWTPGLQDQAEDR-----AYRNGQL 292 Query: 163 RAVFVYYLIAQNTIDELVLQRL 184 R V V +A++TID+ + Q L Sbjct: 293 RMVVVKIPLAEDTIDQQLWQML 314 >gi|300112788|ref|YP_003759363.1| helicase domain-containing protein [Nitrosococcus watsonii C-113] gi|299538725|gb|ADJ27042.1| helicase domain protein [Nitrosococcus watsonii C-113] Length = 966 Score = 60.0 bits (144), Expect = 2e-07, Method: Composition-based stats. Identities = 28/154 (18%), Positives = 59/154 (38%), Gaps = 22/154 (14%) Query: 49 KEVHDEKIKALEVII------EKANAAPIIVAYHFNSDLARLQKAFPQGR-----TLDKD 97 + D K +AL I E +++ F ++ K F + R TL+ Sbjct: 477 QAGPDAKAEALIEWIYELQAEENEPDLKVLIFTEFVPT-QQMLKEFLEARGISVVTLNGS 535 Query: 98 PCTIQEWNE----GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGV 153 + K + + G GLNLQ+ ++++ + + W+ +Q I R+ Sbjct: 536 MDMEERKQAQDAFRKSHRVLVSTDAGGEGLNLQF-AHVIINYDIPWNPMRLEQRIGRVD- 593 Query: 154 TRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTK 187 + G + V + +++++ V + L K Sbjct: 594 ----RIGQPKMVRAISFVFEDSVEFRVREVLEQK 623 >gi|302690328|ref|XP_003034843.1| hypothetical protein SCHCODRAFT_81115 [Schizophyllum commune H4-8] gi|300108539|gb|EFI99940.1| hypothetical protein SCHCODRAFT_81115 [Schizophyllum commune H4-8] Length = 1215 Score = 60.0 bits (144), Expect = 2e-07, Method: Composition-based stats. Identities = 26/160 (16%), Positives = 52/160 (32%), Gaps = 22/160 (13%) Query: 44 EEKHWKEVHDEKI-KALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTL-------- 94 K+ + ++ + ++ LA +++A Sbjct: 953 AGVRILSSTSSKLNYVMNEVLRYSGDEKFLIFSESPLTLAYIEEALQLLEVRYMRFTTEA 1012 Query: 95 --DKDPCTIQEWNEGKI-PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERI 151 + + + + + GLNL + ++F W + Q I+R+ Sbjct: 1013 KPRQREQMVMTFETSDVYRVFLMELKYGARGLNL-VSASRVIFCEPVWQADVESQAIKRV 1071 Query: 152 GVTRQRQAGFKRA-VFVYYLIAQNTIDELVLQR---LRTK 187 + G KR+ V V LI + T +E +L R L K Sbjct: 1072 -----HRIGQKRSEVNVKTLIIRGTAEENMLSRRLELEGK 1106 >gi|219117189|ref|XP_002179389.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1] gi|217409280|gb|EEC49212.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1] Length = 1843 Score = 60.0 bits (144), Expect = 2e-07, Method: Composition-based stats. Identities = 19/128 (14%), Positives = 44/128 (34%), Gaps = 14/128 (10%) Query: 61 VIIE-KANAAPIIVAYHFNSDLARLQKAFPQ-------GRTLDKDPCTIQEWNEGKIPLL 112 I++ + IV + + Q+A R+L ++++ +L Sbjct: 1678 DIMDVQDKGEKSIVFSQWEDMIDICQQALEDNAVGYTRARSLKDLSGSVRDLQSVGCDVL 1737 Query: 113 FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIA 172 + GL + + + + Q + RI + G R +V+ I Sbjct: 1738 LLNVKKAAEGLTILEASH-VFLVEPLLNHSLDSQALARIN-----RIGQTRKTYVHRYIM 1791 Query: 173 QNTIDELV 180 ++TI+ + Sbjct: 1792 EDTIEVKI 1799 >gi|213401273|ref|XP_002171409.1| E3 ubiquitin-protein ligase SHPRH [Schizosaccharomyces japonicus yFS275] gi|211999456|gb|EEB05116.1| E3 ubiquitin-protein ligase SHPRH [Schizosaccharomyces japonicus yFS275] Length = 1383 Score = 60.0 bits (144), Expect = 2e-07, Method: Composition-based stats. Identities = 29/153 (18%), Positives = 49/153 (32%), Gaps = 26/153 (16%) Query: 49 KEVHDEKIKA----LEVIIEKANAAPIIVAYHFNSDLARLQKAFP---------QGRTLD 95 K+ KI L + A ++V + L L +F GR Sbjct: 1203 KQSFSSKIDTIVRHLLDVF-----AKVVVFSQWADVLDGLHLSFRANDISFVKFDGRKRG 1257 Query: 96 KDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTR 155 K + ++ L AH S G L ++ + Q I R+ Sbjct: 1258 KSIQDFVKNPTKQVLTLHAHSQSSGLTL---IAATHVILCEPLLNPSLELQAISRV---- 1310 Query: 156 QRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKS 188 + G + VY + N+I+E +L+ K Sbjct: 1311 -HRIGQTKPTSVYVYVTDNSIEEEILRLSIQKR 1342 >gi|154315192|ref|XP_001556919.1| hypothetical protein BC1G_04635 [Botryotinia fuckeliana B05.10] gi|150847598|gb|EDN22791.1| hypothetical protein BC1G_04635 [Botryotinia fuckeliana B05.10] Length = 1357 Score = 60.0 bits (144), Expect = 2e-07, Method: Composition-based stats. Identities = 23/162 (14%), Positives = 51/162 (31%), Gaps = 26/162 (16%) Query: 43 DEEKHWKEVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARL----------QKAFPQ 90 D++ K+ L+ ++ K + +++ L L + Sbjct: 764 DDQLKGLIASSGKMMLLDRLLAKLKKDNHRVLIFSQMVKMLDILGDYLQLRGYQFQRLDG 823 Query: 91 GRTLDKDPCTIQEWN-EGKIPL-LFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMI 148 I +N +G + G G+NL + +V F W+ + Q + Sbjct: 824 TVAAGPRRQAIDHFNADGSNDFCFLLSTRAGGLGINLMT-ADTVVIFDSDWNPQADLQAM 882 Query: 149 ERIGVTRQRQAGFKRA-VFVYYLIAQNTIDELVLQRLRTKST 189 R + G K+ + + + + + LR K+ Sbjct: 883 AR-----AHRIGQKKPFITIQRGVT-----DKEKKELREKAA 914 >gi|299883434|ref|YP_003738986.1| helicase domain protein [Halalkalicoccus jeotgali B3] gi|300712780|ref|YP_003738592.1| helicase domain protein [Halalkalicoccus jeotgali B3] gi|299126464|gb|ADJ16801.1| helicase domain protein [Halalkalicoccus jeotgali B3] gi|299126860|gb|ADJ17195.1| helicase domain protein [Halalkalicoccus jeotgali B3] Length = 980 Score = 60.0 bits (144), Expect = 2e-07, Method: Composition-based stats. Identities = 31/167 (18%), Positives = 62/167 (37%), Gaps = 24/167 (14%) Query: 52 HDEKIKALEVIIE----KANAAPIIVAYHFNSDLARLQ----------KAFPQGRTLDKD 97 D K + L +E + I++ + L L+ + + + Sbjct: 463 TDSKAELLREFVERILAEDPDEKILIFTEYTDTLKYLRDTVFPEHDIAQVYGDLEQERRR 522 Query: 98 PCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 + NE + L + GLNLQ+ +I+V + L W+ Q + R+ Sbjct: 523 REMEKFENEANLMLA---TDAAQEGLNLQF-AHIMVNYDLPWNPIRIDQRMGRL-----H 573 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIH 204 + G R V + L NT + +L+ L K+ + L ++ + + Sbjct: 574 RYGQDRTVEIRNLFFDNTRESDILELLLEKTDQIEADL-GMRSDVLG 619 >gi|146324369|ref|XP_750547.2| SNF2 family helicase/ATPase [Aspergillus fumigatus Af293] gi|129557212|gb|EAL88509.2| SNF2 family helicase/ATPase, putative [Aspergillus fumigatus Af293] Length = 1461 Score = 60.0 bits (144), Expect = 2e-07, Method: Composition-based stats. Identities = 32/184 (17%), Positives = 64/184 (34%), Gaps = 31/184 (16%) Query: 36 ANGAVYYD-EEKHWKEVHD--------EKIKALEVII----EKANAAPIIVAYHFNSDLA 82 +N +Y D KE+ + KI L I E A I+ + + L Sbjct: 1199 SNSFIYTDISSGTLKEIKNIDLEASFGTKIDTLARHILWLREHDPGAKSIIFSQYKTFLE 1258 Query: 83 RLQKAFPQGRT----LDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLW 138 L AF + + +D + ++ + F H + GLNL + + Sbjct: 1259 VLGTAFSRFKIGYSSIDNADGIERFKSDPAVECFFLHAKAQSSGLNLVNATH-VFLCEPL 1317 Query: 139 WDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQR--------LRTKSTI 190 + Q I R+ + G R V+ + +T+++ + + + K + Sbjct: 1318 VNTAIELQAIARV-----HRIGQHRPTTVWMYLVSDTVEQSIYELSVSRRLAHIVQKEKV 1372 Query: 191 QDLL 194 ++ L Sbjct: 1373 KEAL 1376 >gi|153006826|ref|YP_001381151.1| helicase domain-containing protein [Anaeromyxobacter sp. Fw109-5] gi|152030399|gb|ABS28167.1| helicase domain protein [Anaeromyxobacter sp. Fw109-5] Length = 1145 Score = 60.0 bits (144), Expect = 2e-07, Method: Composition-based stats. Identities = 36/185 (19%), Positives = 76/185 (41%), Gaps = 18/185 (9%) Query: 5 HKFQR--ELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVI 62 + ++ EL L+ IE SK K Q+ N + +++ V E L+ + Sbjct: 454 QRLEKLVELARALEKREIE-----SKLNKLRQVLNEQQIFSDKRMKLLVFTEHKDTLDYL 508 Query: 63 I-EKANAAPIIVAYHFNSDLARLQKAFPQGR--TLDKDPCTIQEWNEGKIPLLFAHPASC 119 + + P+ + + ++ G T +E+ E +L A + Sbjct: 509 AGDGYDGRPLGKLREWGLSVTQIHGGMQIGDRDTPGTRIYAEREFRE-DCQVLVA-TEAA 566 Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 G G+NLQ+ +++ + + W+ +Q + RI + G ++ ++ A NT + Sbjct: 567 GEGINLQF-CWLMINYDIPWNPVRLEQRMGRI-----HRYGQQKDCLIFNFAAVNTREGR 620 Query: 180 VLQRL 184 VL++L Sbjct: 621 VLEKL 625 >gi|302764302|ref|XP_002965572.1| hypothetical protein SELMODRAFT_143427 [Selaginella moellendorffii] gi|300166386|gb|EFJ32992.1| hypothetical protein SELMODRAFT_143427 [Selaginella moellendorffii] Length = 1112 Score = 60.0 bits (144), Expect = 2e-07, Method: Composition-based stats. Identities = 29/171 (16%), Positives = 60/171 (35%), Gaps = 22/171 (12%) Query: 32 CLQLANGAVYYDEEKHWKEVHDEKIKALEVII---EKANAA---PIIVAYHFNSDLARLQ 85 ++L + D W+ K+ L + ++ N IV F ++ ++ Sbjct: 919 LIELQPSYIQEDWHSEWQATSSSKVSYLVERLRGLQQENGKLPEKAIVFSQFLEHISAIE 978 Query: 86 KAFPQGRTLD----------KDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFF 135 +G +++ + E ++ +S GL+L + + + Sbjct: 979 MQLTKGGIEHAGMYSPMPAASKMKSLRTFQENPKCVVLLMDSSSALGLDLSFVTH-VFLM 1037 Query: 136 SLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRT 186 WD +Q++ R + G R V V L TI+E +L L+ Sbjct: 1038 EPIWDRSIEEQVVSR-----AHRMGATRPVLVETLAMAGTIEEQMLGFLQR 1083 >gi|302802608|ref|XP_002983058.1| hypothetical protein SELMODRAFT_155610 [Selaginella moellendorffii] gi|300149211|gb|EFJ15867.1| hypothetical protein SELMODRAFT_155610 [Selaginella moellendorffii] Length = 1114 Score = 60.0 bits (144), Expect = 2e-07, Method: Composition-based stats. Identities = 29/171 (16%), Positives = 60/171 (35%), Gaps = 22/171 (12%) Query: 32 CLQLANGAVYYDEEKHWKEVHDEKIKALEVII---EKANAA---PIIVAYHFNSDLARLQ 85 ++L + D W+ K+ L + ++ N IV F ++ ++ Sbjct: 919 LIELQPSYIQEDWHSEWQATSSSKVSYLVERLRGLQQENGKLPEKAIVFSQFLEHISAIE 978 Query: 86 KAFPQGRTLD----------KDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFF 135 +G +++ + E ++ +S GL+L + + + Sbjct: 979 MQLTKGGIEHAGMYSPMPAASKMKSLRTFQENPKCVVLLMDSSSALGLDLSFVTH-VFLM 1037 Query: 136 SLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRT 186 WD +Q++ R + G R V V L TI+E +L L+ Sbjct: 1038 EPIWDRSIEEQVVSR-----AHRMGATRPVLVETLAMAGTIEEQMLGFLQR 1083 >gi|225869333|ref|YP_002745281.1| helicase [Streptococcus equi subsp. zooepidemicus] gi|225702609|emb|CAX00640.1| putative helicase [Streptococcus equi subsp. zooepidemicus] Length = 2281 Score = 60.0 bits (144), Expect = 2e-07, Method: Composition-based stats. Identities = 23/98 (23%), Positives = 39/98 (39%), Gaps = 4/98 (4%) Query: 90 QGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIE 149 T DK ++ N G++ +L A G GLN+Q + + W + Q Sbjct: 1912 DANTDDKKNSLSRKVNSGEVRILMASTEKGGTGLNVQSRMKAVHHLDVPWRPSDIVQRNG 1971 Query: 150 RIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTK 187 R+ RQ + V +Y+ I + + D + Q K Sbjct: 1972 RLI----RQGNMHQEVDIYHYITKGSFDNYLWQTQENK 2005 >gi|284053201|ref|ZP_06383411.1| helicase-like protein [Arthrospira platensis str. Paraca] Length = 1044 Score = 60.0 bits (144), Expect = 2e-07, Method: Composition-based stats. Identities = 36/174 (20%), Positives = 65/174 (37%), Gaps = 33/174 (18%) Query: 53 DEKIKALEVII--EKANAAPIIVAYHFNSDLARLQK-------------AFPQGRTLDKD 97 D K+ L + E IV + + L++ + G +D Sbjct: 729 DSKLSFLLETLRREFLERDSAIVFTQYTDTMDYLREQLRSLYGDRLACYSGRGGELPVQD 788 Query: 98 PCT----------IQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQM 147 P + +G+I LL S GLNLQ G +L+ + L W+ +Q Sbjct: 789 PEPSWRVVPKGKIKNLFRQGEIQLLLC-TESASEGLNLQTCG-VLINYDLPWNPMRVEQR 846 Query: 148 IERIGVTRQRQAGFKRA-VFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKK 200 I R+ + G + V ++ L T++ V +RLR + + ++ L+ Sbjct: 847 IGRVD-----RIGQRYPTVKIHNLYYDGTVEAKVYRRLRERIGLFTNVVGNLQP 895 >gi|171677999|ref|XP_001903950.1| hypothetical protein [Podospora anserina S mat+] gi|170937068|emb|CAP61727.1| unnamed protein product [Podospora anserina S mat+] Length = 2308 Score = 60.0 bits (144), Expect = 2e-07, Method: Composition-based stats. Identities = 28/148 (18%), Positives = 62/148 (41%), Gaps = 18/148 (12%) Query: 54 EKIKALEVIIEK--ANAAPIIVAYHFNSDLA----RLQKAFPQGRTL------DKDPCTI 101 K+ + +I+ A ++V + S L R+++ P+ L + Sbjct: 2126 SKVDHMMELIKSIIAKDERVLVFGQYQSYLEKLWSRIKEIDPKATNLALVTSSRDTSAML 2185 Query: 102 QEWNEG---KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIE-RIGVTRQR 157 +++ G + LL + G NL N ++F + ++ +H Q I R R Sbjct: 2186 EKFKSGTGGNVMLLNIDNDTSA-GSNLTV-ANHIIFANPYFHPNKHHQAITVRQAKGRCL 2243 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLR 185 + G + V+VY+ + +T ++ +L+ + Sbjct: 2244 RYGQMKTVYVYHFMMAHTDEDRLLREHQ 2271 >gi|15643750|ref|NP_228798.1| hypothetical protein TM0990 [Thermotoga maritima MSB8] gi|4981530|gb|AAD36069.1|AE001761_1 conserved hypothetical protein [Thermotoga maritima MSB8] Length = 967 Score = 60.0 bits (144), Expect = 2e-07, Method: Composition-based stats. Identities = 40/211 (18%), Positives = 73/211 (34%), Gaps = 39/211 (18%) Query: 4 YHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEE----KHWKEVHDEKIKAL 59 Y + + E ++ NS +K + G + E+ +D K+K L Sbjct: 297 YDEMELEENSEIDDLISSIINSVAKRYPLDK---GQINALEKILKIGKAIGKNDSKLKTL 353 Query: 60 EVIIEKANAA--PIIVAYHFNSDLARLQKAFPQ--------------------GRTLDKD 97 ++ +IV F L L+ P G ++ Sbjct: 354 AEVLAYHLKKNEKVIVFTEFKDTLEYLRNNLPTLLEQEGIHLSEEKDISVLHGGMKSEEI 413 Query: 98 PCTIQEW-NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 ++++ N+GK L GLNLQ NIL+ + + W + +Q + RI Sbjct: 414 EKQVEKFANDGK---LLISTDVASEGLNLQV-ANILINYEIPWSPIKLEQRVGRIW---- 465 Query: 157 RQAGFKRAVFVYYLIAQNTIDELVLQRLRTK 187 + + Y L+ + D +L+ L K Sbjct: 466 -RLNQTKETIAYTLLLNHEADLQILESLYQK 495 >gi|83310005|ref|YP_420269.1| superfamily II DNA/RNA helicase [Magnetospirillum magneticum AMB-1] gi|82944846|dbj|BAE49710.1| Superfamily II DNA/RNA helicase [Magnetospirillum magneticum AMB-1] Length = 760 Score = 60.0 bits (144), Expect = 2e-07, Method: Composition-based stats. Identities = 25/134 (18%), Positives = 50/134 (37%), Gaps = 13/134 (9%) Query: 69 APIIVAYHFNSDLARLQKAFPQGRTLDK------DPCTIQEWN-EGKIPLLFAHPASCGH 121 +I+ H +LQ AF +D ++ + EG L+ + Sbjct: 564 EKLIIFAHHIEVQQQLQVAFSDALVIDGKTSATARRKAVKAFQAEGGPRLIICSLRAAQT 623 Query: 122 GLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVL 181 L L ++L F L W +Q +R + G V + ++A ++D+ +L Sbjct: 624 ALTLTRARHVL-FVELDWTPSGIEQAADR-----AHRIGQDGQVEITLMVAPGSLDDRML 677 Query: 182 QRLRTKSTIQDLLL 195 + + K I ++ Sbjct: 678 EVITRKRVIIRSVM 691 >gi|320592310|gb|EFX04749.1| snf2 family helicase [Grosmannia clavigera kw1407] Length = 1567 Score = 59.6 bits (143), Expect = 2e-07, Method: Composition-based stats. Identities = 29/152 (19%), Positives = 60/152 (39%), Gaps = 18/152 (11%) Query: 47 HWKEVHDEKIKALEV-IIEKANAAPIIVAY-------HFNSDLARLQKAFP---QGRTLD 95 K+ L I+ IIV Y + L LQ +G T + Sbjct: 1332 QIVSTASAKLSYLLDAIVRHQETEQIIVFYDSENVAFYLAEHLEMLQVHHLIYARGITAE 1391 Query: 96 KDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 + ++ +N + +L + GL++ + + F + + Q I R+ Sbjct: 1392 RRAQYVETFNGNARFRVLLMDLSQAAFGLDM-RSASRIYFIGPVLNPQVEAQAIGRV--- 1447 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRT 186 R+ +R V V L+ +++++EL+++R R+ Sbjct: 1448 --RRISQQRQVSVETLVLRDSVEELIVERRRS 1477 >gi|291568725|dbj|BAI90997.1| putative helicase [Arthrospira platensis NIES-39] Length = 1044 Score = 59.6 bits (143), Expect = 2e-07, Method: Composition-based stats. Identities = 36/174 (20%), Positives = 65/174 (37%), Gaps = 33/174 (18%) Query: 53 DEKIKALEVII--EKANAAPIIVAYHFNSDLARLQK-------------AFPQGRTLDKD 97 D K+ L + E IV + + L++ + G +D Sbjct: 729 DSKLSFLLETLRREFLERDSAIVFTQYTDTMDYLREQLRSLYGDRLACYSGRGGELPVQD 788 Query: 98 PCT----------IQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQM 147 P + +G+I LL S GLNLQ G +L+ + L W+ +Q Sbjct: 789 PEPSWRVVPKGKIKNLFRQGEIQLLLC-TESASEGLNLQTCG-VLINYDLPWNPMRVEQR 846 Query: 148 IERIGVTRQRQAGFKRA-VFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKK 200 I R+ + G + V ++ L T++ V +RLR + + ++ L+ Sbjct: 847 IGRVD-----RIGQRYPTVKIHNLYYDGTVEAKVYRRLRERIGLFTNVVGNLQP 895 >gi|149634326|ref|XP_001510803.1| PREDICTED: similar to mDomino [Ornithorhynchus anatinus] Length = 3040 Score = 59.6 bits (143), Expect = 2e-07, Method: Composition-based stats. Identities = 23/164 (14%), Positives = 62/164 (37%), Gaps = 19/164 (11%) Query: 32 CLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQK--- 86 Q++ + + + K++AL ++++K + +++ L L+ Sbjct: 1762 LQQISAPYLLQFPDLRLVQYDSGKLEALAILLQKLKSEGRRVLILSQMILMLDILELFLN 1821 Query: 87 -------AFPQGRTLDKDPCTIQEWNEGK-IPLLFAHPASCGHGLNLQYGGNILVFFSLW 138 + ++ ++ +N K I S G+NL + +VF+ Sbjct: 1822 FHFITFIRIDEYANSEQRQELMKSFNRNKRIFCAILSTHSRSTGINLVE-ADTVVFYDND 1880 Query: 139 WDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQ 182 + + E + G + + +Y L++ N+++E +L+ Sbjct: 1881 LNPVMDAKAQEWCE-----RIGRCKDIHIYRLVSGNSVEEKLLK 1919 >gi|158285693|ref|XP_308421.4| AGAP007417-PA [Anopheles gambiae str. PEST] gi|157020116|gb|EAA04610.4| AGAP007417-PA [Anopheles gambiae str. PEST] Length = 1323 Score = 59.6 bits (143), Expect = 2e-07, Method: Composition-based stats. Identities = 28/157 (17%), Positives = 55/157 (35%), Gaps = 19/157 (12%) Query: 42 YDEEKHWKEVHDEKIK-----ALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDK 96 D + K+ ALE++ E + I++ H+ L + A + Sbjct: 1141 IDPMHKIRGNFSNKVSKIVQTALELVAEDPS-VKIVIFSHWEPILTEVGVALAANDITLR 1199 Query: 97 DP-----CTIQEWNEGK--IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIE 149 + + ++ + + I L GLNL + + + E Q I Sbjct: 1200 EKSAKFYQCVADFKDPEKGITCLLLPLRFGSKGLNLTEATH-VFLVEPILNPGEEMQAIG 1258 Query: 150 RIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRT 186 R+ + G R FV+ I NTI+ + + ++ Sbjct: 1259 RV-----HRIGQTRPTFVHRFIMLNTIETTIHETIQG 1290 >gi|326471326|gb|EGD95335.1| hypothetical protein TESG_02821 [Trichophyton tonsurans CBS 112818] Length = 2122 Score = 59.6 bits (143), Expect = 2e-07, Method: Composition-based stats. Identities = 31/152 (20%), Positives = 60/152 (39%), Gaps = 21/152 (13%) Query: 54 EKIKALEVIIEKANAAP----IIVAYHFNSDLARLQKAFPQGRTL-------DKDPCT-I 101 K A+ ++E A P +++ F + KA D+ P + I Sbjct: 1927 SKFTAVIELLEDAKRVPADDQVLLFIQFPELMDAASKALESASIPHTVIQPGDRTPTSKI 1986 Query: 102 QEWNEGKIPL----LFAHPAS-CGHGLNLQYGGNILVFFSL--WWDLEEHQQMIERIGVT 154 E+ GK + L + GLNLQ N ++FF ++ + + Sbjct: 1987 SEFQNGKESVKSKVLILNLGDVTASGLNLQN-ANHIIFFGPLVARSQYDYNSGMA-QAIG 2044 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRT 186 R R+ G + V +Y+++A T++ + ++ R Sbjct: 2045 RSRRYGQLKHVHIYHVLALRTVEVNIFEKRRK 2076 >gi|261868298|ref|YP_003256220.1| putative DEAD/DEAH box helicase [Aggregatibacter actinomycetemcomitans D11S-1] gi|261413630|gb|ACX83001.1| putative DEAD/DEAH box helicase [Aggregatibacter actinomycetemcomitans D11S-1] Length = 655 Score = 59.6 bits (143), Expect = 2e-07, Method: Composition-based stats. Identities = 36/192 (18%), Positives = 77/192 (40%), Gaps = 25/192 (13%) Query: 20 IEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKAL-EVIIEKANAAPIIVA---- 74 + A ++A +K L A A+ + E K + D ++ L + + N I++ Sbjct: 407 LTALSTAFDKLKELGAAQKAIIFTESKRTQ---DYLLECLTQTLYAGENGDGIVLFNGTN 463 Query: 75 ------YHFNSDLARLQKA--FPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQ 126 + L R + + +T D ++ + + + + G+NLQ Sbjct: 464 NDAQAQKIYKDWLKRHEGSDKITGSKTADTRAALVEHFKDRGC--IMIATEAGAEGINLQ 521 Query: 127 YGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQ-NTIDELVLQRLR 185 + ++++ + L W+ + +Q I R + G K V V + + N D+ V + L Sbjct: 522 F-CSLIINYDLPWNPQRVEQRIGRC-----HRYGQKHDVVVVNFVDETNEADQRVYELLE 575 Query: 186 TKSTIQDLLLNA 197 K + + +L A Sbjct: 576 QKFQLFNGVLGA 587 >gi|331089479|ref|ZP_08338378.1| hypothetical protein HMPREF1025_01961 [Lachnospiraceae bacterium 3_1_46FAA] gi|330404847|gb|EGG84385.1| hypothetical protein HMPREF1025_01961 [Lachnospiraceae bacterium 3_1_46FAA] Length = 412 Score = 59.6 bits (143), Expect = 2e-07, Method: Composition-based stats. Identities = 37/162 (22%), Positives = 65/162 (40%), Gaps = 19/162 (11%) Query: 36 ANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLD 95 A G Y + + + AL I+EK A I+ Y+F+ +L L++ F D Sbjct: 253 AAGLCYI--WRKIVNTDESRQLALLEIVEKHPRA--IIFYNFDYELELLKELFI--PHAD 306 Query: 96 KDPCTIQEWNEGK---IP-----LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQM 147 I EWN K IP + + G N + ++F+S + + QQ Sbjct: 307 TMYFEIAEWNGHKHQPIPKSESWVYLVQYNAGAEGWNC-IKTDTIIFYSQNYSYKIMQQS 365 Query: 148 IERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKST 189 RI + ++ Y+L +++ ID + + L+ K Sbjct: 366 AGRIDRLNT----PFKDLYYYHLKSRSGIDLAISKALKEKKD 403 >gi|156053363|ref|XP_001592608.1| hypothetical protein SS1G_06849 [Sclerotinia sclerotiorum 1980] gi|154704627|gb|EDO04366.1| hypothetical protein SS1G_06849 [Sclerotinia sclerotiorum 1980 UF-70] Length = 2003 Score = 59.6 bits (143), Expect = 2e-07, Method: Composition-based stats. Identities = 20/97 (20%), Positives = 38/97 (39%), Gaps = 7/97 (7%) Query: 95 DKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGV 153 + ++E+ K +L G GLNL + N + LWW+ Q RI Sbjct: 1859 NDQAHILREFETNPKFTILIIGLKVGGVGLNLAF-ANRAIMVDLWWNAATESQANGRIF- 1916 Query: 154 TRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 + G ++ + + ++D +L+ KS + Sbjct: 1917 ----RIGQEKETNFARFMMRESVDIRLLRMQVEKSIV 1949 >gi|119467932|ref|XP_001257772.1| SNF2 family helicase/ATPase, putative [Neosartorya fischeri NRRL 181] gi|119405924|gb|EAW15875.1| SNF2 family helicase/ATPase, putative [Neosartorya fischeri NRRL 181] Length = 1509 Score = 59.6 bits (143), Expect = 2e-07, Method: Composition-based stats. Identities = 32/184 (17%), Positives = 64/184 (34%), Gaps = 31/184 (16%) Query: 36 ANGAVYYD-EEKHWKEVHD--------EKIKALEVII----EKANAAPIIVAYHFNSDLA 82 +N +Y D KE+ + KI L I E A I+ + + L Sbjct: 1247 SNSFIYADISSGTLKEIKNIDLEASFGTKIDTLARHILWLREHDPGAKSIIFSQYKTFLE 1306 Query: 83 RLQKAFPQGRT----LDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLW 138 L AF + + +D + ++ + F H + GLNL + + Sbjct: 1307 VLGTAFSRFKIGYSSIDNADGIERFKSDPAVECFFLHAKAQSSGLNLVNATH-VFLCEPL 1365 Query: 139 WDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQR--------LRTKSTI 190 + Q I R+ + G R V+ + +T+++ + + + K + Sbjct: 1366 VNTAIELQAIARV-----HRIGQHRPTTVWMYLVSDTVEQSIYELSVSRRLAHIVQKEKV 1420 Query: 191 QDLL 194 ++ L Sbjct: 1421 KEAL 1424 >gi|108802453|ref|YP_642649.1| helicase-like protein [Mycobacterium sp. MCS] gi|119855279|ref|YP_935882.1| helicase domain-containing protein [Mycobacterium sp. KMS] gi|108772872|gb|ABG11593.1| helicase-like protein [Mycobacterium sp. MCS] gi|119697996|gb|ABL95067.1| helicase domain protein [Mycobacterium sp. KMS] Length = 1069 Score = 59.6 bits (143), Expect = 2e-07, Method: Composition-based stats. Identities = 28/141 (19%), Positives = 54/141 (38%), Gaps = 18/141 (12%) Query: 65 KANAAPIIVAYHFNSDLARLQKAFPQ---------GRTLDKDPCTIQE-WNEGKIPLLFA 114 N +V + + GR D +++ + G + Sbjct: 459 PGNGEQAVVFTEYADSAQWIADRLKAEGYTAQMYSGRQSKPDRDEVRKAFMRGDFQI-IV 517 Query: 115 HPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQN 174 + G++LQ ++LV + + W L +Q + RI + G +R V +Y L+A + Sbjct: 518 TTDAGNEGIDLQ-AAHVLVNYDIPWSLVRLEQRMGRI-----HRVGQQREVHLYNLVATD 571 Query: 175 TID-ELVLQRLRTKSTIQDLL 194 T + E +L+ L T + L Sbjct: 572 TREGETLLRLLDNFVTAANEL 592 >gi|195035831|ref|XP_001989375.1| GH11691 [Drosophila grimshawi] gi|193905375|gb|EDW04242.1| GH11691 [Drosophila grimshawi] Length = 735 Score = 59.6 bits (143), Expect = 2e-07, Method: Composition-based stats. Identities = 23/132 (17%), Positives = 45/132 (34%), Gaps = 17/132 (12%) Query: 70 PIIVAYHFNSDLARLQKAF---------PQGRTLDKDPCT-IQEWNEGK-IPLLFAHPAS 118 I+ H + + GRT+ + + + + Sbjct: 521 KFIIFAHHRVMMDAISDCLRELKVQFVRIDGRTVSDVRADYVDTFQKKSSCKAAVLSLKA 580 Query: 119 CGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDE 178 C G+ L ++VF L W+ Q +R + G + V YL+A T D+ Sbjct: 581 CNSGITLT-AAELIVFAELDWNPSTLAQA-----ESRAHRIGQTKPVICRYLMAHQTADD 634 Query: 179 LVLQRLRTKSTI 190 ++ L++K + Sbjct: 635 IIWNMLKSKQEV 646 >gi|306833660|ref|ZP_07466787.1| SNF2 family protein [Streptococcus bovis ATCC 700338] gi|304424430|gb|EFM27569.1| SNF2 family protein [Streptococcus bovis ATCC 700338] Length = 2274 Score = 59.6 bits (143), Expect = 3e-07, Method: Composition-based stats. Identities = 23/98 (23%), Positives = 39/98 (39%), Gaps = 4/98 (4%) Query: 90 QGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIE 149 T +K ++ N G++ +L A G GLN+Q + + W + Q Sbjct: 1905 DANTDEKKNSLSRKVNSGEVRILMASTEKGGTGLNVQSRMKAVHHLDVPWRPSDIVQRNG 1964 Query: 150 RIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTK 187 R+ RQ R V +Y+ I + + D + Q K Sbjct: 1965 RLI----RQGNMHREVDIYHYITKGSFDNYLWQTQENK 1998 >gi|302793320|ref|XP_002978425.1| hypothetical protein SELMODRAFT_109142 [Selaginella moellendorffii] gi|300153774|gb|EFJ20411.1| hypothetical protein SELMODRAFT_109142 [Selaginella moellendorffii] Length = 508 Score = 59.6 bits (143), Expect = 3e-07, Method: Composition-based stats. Identities = 29/161 (18%), Positives = 56/161 (34%), Gaps = 26/161 (16%) Query: 53 DEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTI----------- 101 + L + + AN ++V F + L + R +D + Sbjct: 300 TAFVMKLIELCQCANEK-VLVFGEFLAPFHLLLRMLELERGWSRDKEVVFLHGALVTEER 358 Query: 102 ----QEWNE--GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTR 155 +N + + A +C G+ L G + +V W+ + Q I R Sbjct: 359 HELMDRFNAEGSEARVCLASIRACAEGITL-VGASRVVLLHPVWNPAQTNQAISR----- 412 Query: 156 QRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + G KR VFVY L+ + ++ + R + K + + Sbjct: 413 AFRLGQKRKVFVYRLVTE--VERVKNSRTKWKDFCSEAIFE 451 >gi|154321115|ref|XP_001559873.1| hypothetical protein BC1G_01432 [Botryotinia fuckeliana B05.10] gi|150851970|gb|EDN27162.1| hypothetical protein BC1G_01432 [Botryotinia fuckeliana B05.10] Length = 855 Score = 59.6 bits (143), Expect = 3e-07, Method: Composition-based stats. Identities = 35/165 (21%), Positives = 55/165 (33%), Gaps = 25/165 (15%) Query: 38 GAVYYDEEK-----------HWKEVHDEKIKALEVII----EKANAAPIIVAYHFNSDLA 82 A+Y D K + KI L I E + IV F L Sbjct: 588 SAIYSDVSKATLSAIKNIELQDNKSFGTKIDTLARHILYLRESDPGSKSIVFSQFTEFLP 647 Query: 83 RLQKAFPQGRT----LDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLW 138 L AF R +D+ + N+ I + H + GL L N +FF Sbjct: 648 VLASAFDAFRIGHSSIDRPNGVEKFKNDPGIEVFLLHSRAHSAGLTLVNASN--IFFCEP 705 Query: 139 WDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQR 183 I G +R + G K ++ ++ NT+D+ + + Sbjct: 706 ----LLNTAIALQGESRVHRIGQKFETNIWVMVMGNTVDQSIYEL 746 >gi|315045562|ref|XP_003172156.1| hypothetical protein MGYG_04745 [Arthroderma gypseum CBS 118893] gi|311342542|gb|EFR01745.1| hypothetical protein MGYG_04745 [Arthroderma gypseum CBS 118893] Length = 1517 Score = 59.6 bits (143), Expect = 3e-07, Method: Composition-based stats. Identities = 24/119 (20%), Positives = 42/119 (35%), Gaps = 10/119 (8%) Query: 68 AAPIIVAYHFNSDLARLQ---KAFPQGRTLDKDPCTIQEWNEGKI-PLLFAHPASCGHGL 123 A IV S L+ L+ F G + + I+ + E H + GL Sbjct: 1257 GAKSIVFSQNKSFLSTLRLVFYRFKIGHSSIDEQSGIERFKEDHTKECFLLHAKAHASGL 1316 Query: 124 NLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQ 182 NL + + + Q I R+ + G + V+ + NT++E + Q Sbjct: 1317 NLVNATH-VFLCEPLINTAIELQAIARV-----HRIGQHQDTTVWMYLVANTVEETIYQ 1369 >gi|225563147|gb|EEH11426.1| DNA repair protein rad8 [Ajellomyces capsulatus G186AR] Length = 2156 Score = 59.6 bits (143), Expect = 3e-07, Method: Composition-based stats. Identities = 35/160 (21%), Positives = 65/160 (40%), Gaps = 21/160 (13%) Query: 45 EKHWKEVHDEKIKALEVIIEK----ANAAPIIVAYHFNSDL-----ARLQKA---FPQGR 92 K W+E K+ L +++ A +++ F DL A LQKA Sbjct: 1958 GKKWQEYGGTKLLELTRLVQDTERIAEDEQVLLFIQF-PDLMEAASAALQKANIPHLMIS 2016 Query: 93 TLDKDPCT-IQEWNEG----KIPLLFAHPAS-CGHGLNLQYGGNILVFFSL-WWDLEEHQ 145 D+ + I E+ + +L H GLNLQ +++ F L ++ Sbjct: 2017 VNDRTSSSKIAEFQTRAEKVESKVLILHLGDVSASGLNLQNANHVIFFHPLFTKSQYDYN 2076 Query: 146 QMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLR 185 + + R R+ G ++ V +Y+ +A TI+ + ++ R Sbjct: 2077 SGMA-QAIGRSRRYGQQKHVHIYHFLALKTIEVNIFEQRR 2115 >gi|259484742|tpe|CBF81224.1| TPA: ATP-dependent DNA helicase (Eurofung) [Aspergillus nidulans FGSC A4] Length = 1415 Score = 59.6 bits (143), Expect = 3e-07, Method: Composition-based stats. Identities = 30/168 (17%), Positives = 56/168 (33%), Gaps = 23/168 (13%) Query: 32 CLQLANGAVYYDEE-KHWKEVHD--------EKIKALEVII----EKANAAPIIVAYHFN 78 Q ++ ++Y D E+ + KI L I E A IV + Sbjct: 1136 LEQHSSNSIYTDIGSGTLHEIKNIDLKDSFGTKIDTLARHILWLREHDPGAQSIVFSQYK 1195 Query: 79 SDLARLQKAFPQGRT----LDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVF 134 L L AF + + +D+ + + I H + GLNL + + Sbjct: 1196 GFLDYLANAFRRFKIGYSSVDESDGIEKFKKDPGIECFLLHAKAHSSGLNLVNATH-VFL 1254 Query: 135 FSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQ 182 + Q I R+ + G R V+ + +T+++ + Sbjct: 1255 CEPLINTAIELQAIARV-----HRIGQHRPTTVWMYLISDTVEKSIYD 1297 >gi|307109751|gb|EFN57988.1| hypothetical protein CHLNCDRAFT_142147 [Chlorella variabilis] Length = 944 Score = 59.6 bits (143), Expect = 3e-07, Method: Composition-based stats. Identities = 14/81 (17%), Positives = 32/81 (39%), Gaps = 6/81 (7%) Query: 109 IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVY 168 + + + G G+ L G +I + + +Q I R + G + + V Sbjct: 824 LEVFLLTYRAGGAGITLTAGTHI-ILCEPTLNPSFEKQAIGR-----SHRMGQTKPLTVT 877 Query: 169 YLIAQNTIDELVLQRLRTKST 189 ++ TI+E V + + + + Sbjct: 878 RMLMLGTIEEKVAEFVERQKS 898 >gi|323456007|gb|EGB11874.1| hypothetical protein AURANDRAFT_70672 [Aureococcus anophagefferens] Length = 3210 Score = 59.6 bits (143), Expect = 3e-07, Method: Composition-based stats. Identities = 30/167 (17%), Positives = 57/167 (34%), Gaps = 19/167 (11%) Query: 37 NGAVYYDEEKHWKEVHDEKIKALEVIIEKANA-APIIVAYHFNSDLARLQKAF-----PQ 90 A D+ H K+ + +++ ++V F LA++ Sbjct: 2188 CAAFAADDGATVAAPHGAKLAQIVDLVKSLPGDERVLVFVQFADLLAKVDGVLNDSGIKT 2247 Query: 91 GRTLDKDPCTIQE---WN-------EGKIPLLFAHPASCGHGLNLQYGGN-ILVFFSLWW 139 + + + + ++ LL H S G NL + I V Sbjct: 2248 LKIKGSAHQMMNAMTAFQAETLAKDDPRVLLLELHNESA-SGANLTTANHAIFVHPLHVD 2306 Query: 140 DLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRT 186 L+ + E + R R+ G KR V +Y +A +T+D + + R Sbjct: 2307 KLQTYM-ACETQAIGRVRRYGQKRTVNLYRFLAADTVDSRLFESRRD 2352 >gi|153815156|ref|ZP_01967824.1| hypothetical protein RUMTOR_01381 [Ruminococcus torques ATCC 27756] gi|145847724|gb|EDK24642.1| hypothetical protein RUMTOR_01381 [Ruminococcus torques ATCC 27756] Length = 412 Score = 59.2 bits (142), Expect = 3e-07, Method: Composition-based stats. Identities = 37/163 (22%), Positives = 67/163 (41%), Gaps = 21/163 (12%) Query: 36 ANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAF-PQGRTL 94 A G Y + + + AL I+EK A I+ Y+F+ +L L++ F P T+ Sbjct: 253 AAGLCYI--WRKIVNTDESRQLALLEIVEKHPRA--IIFYNFDYELKLLKELFIPYADTM 308 Query: 95 DKDPCTIQEWN--------EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 + I EWN E K + + G N + ++F+S + + QQ Sbjct: 309 YFE---IAEWNGHKHQPIPESKNWVYLVQYNAGAEGWNC-IKTDTIIFYSQNYSYKIMQQ 364 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKST 189 RI + ++ Y+L +++ ID + + L+ K Sbjct: 365 SAGRIDRLNT----PFKDLYYYHLKSRSGIDLAISKALKEKKD 403 >gi|211997720|gb|ACJ14806.1| putative phage-associated helicase [Candidatus Hamiltonella defensa] Length = 69 Score = 59.2 bits (142), Expect = 3e-07, Method: Composition-based stats. Identities = 19/48 (39%), Positives = 29/48 (60%) Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKET 202 R + G R VF+++L+ ++ID VL+ L K Q LL+ALKK+ Sbjct: 4 RLHRQGQTRPVFIHHLVMNDSIDITVLEALENKHINQKALLDALKKDI 51 >gi|295675218|ref|YP_003603742.1| helicase domain protein [Burkholderia sp. CCGE1002] gi|295435061|gb|ADG14231.1| helicase domain protein [Burkholderia sp. CCGE1002] Length = 1173 Score = 59.2 bits (142), Expect = 3e-07, Method: Composition-based stats. Identities = 35/217 (16%), Positives = 70/217 (32%), Gaps = 51/217 (23%) Query: 4 YHKFQRELY---------CDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDE 54 Y F+ E+ +L+ E + + K + D Sbjct: 439 YENFEEEVVDQATAAQTIAELEAEVVTLEHLEKKAKALR----------DGGQ-----DR 483 Query: 55 KIKALEVIIE---KANA-----APIIVAYHFNSDL----ARLQKAFPQ---------GRT 93 K + L I++ + +I+ L R++ + G Sbjct: 484 KWEELREILQNTPEMRGPDGLQRKLIIFTEHRDTLNYLADRIRGLLGKHEAVTMIHGGTH 543 Query: 94 LDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGV 153 D + + K + + G G+NLQ N++V + L W+ +Q RI Sbjct: 544 RDDRRKVQELFRNDKDTRVLLATDAAGEGVNLQN-ANLMVNYDLPWNPNRLEQRFGRI-- 600 Query: 154 TRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 + G + ++ ++A T + V Q+L K + Sbjct: 601 ---HRIGQTQVCHLWNMVAAETREGDVFQKLLEKLEV 634 >gi|147677051|ref|YP_001211266.1| DNA/RNA helicase [Pelotomaculum thermopropionicum SI] gi|146273148|dbj|BAF58897.1| hypothetical DNA/RNA helicase [Pelotomaculum thermopropionicum SI] Length = 937 Score = 59.2 bits (142), Expect = 3e-07, Method: Composition-based stats. Identities = 29/158 (18%), Positives = 60/158 (37%), Gaps = 24/158 (15%) Query: 46 KHWKEVHDEKIKALEVII------EKANAAPIIVAYHFNSDLARLQKAFPQGRT------ 93 + + + D + +AL + E ++ F L++ Sbjct: 454 RQCESLPDARAEALLEWMYRLQAEENDPELKFLIFTEFIPTQEMLKEFLENRGFSVVCLN 513 Query: 94 ----LDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIE 149 L++ QE+ G + + G GLNLQ+ ++++ + L W+ +Q I Sbjct: 514 GSMGLEERRRVQQEF-AGHARV-LVSTDAGGEGLNLQF-CHVVINYDLPWNPMRLEQRIG 570 Query: 150 RIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTK 187 R+ + G + V + Q+TI+ V + L+ K Sbjct: 571 RVD-----RIGQEHVVRALNFVLQDTIEYRVQEVLQEK 603 >gi|322501081|emb|CBZ36158.1| unnamed protein product [Leishmania donovani BPK282A1] Length = 1230 Score = 59.2 bits (142), Expect = 3e-07, Method: Composition-based stats. Identities = 17/102 (16%), Positives = 40/102 (39%), Gaps = 7/102 (6%) Query: 96 KDPCTIQEW-NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 + +++ + + + G G+NLQ +++V + Q + R+ Sbjct: 795 ERLTSVRRFREDPACLFFLLSIKAGGCGINLQ-AAHMVVLVDRDYTATNEDQALARV--- 850 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + G + V YL + ++ V QR K+ + ++N Sbjct: 851 --YRIGQRHTVRAVYLATTDASEQRVAQRAAAKNKPRQAIIN 890 >gi|146093740|ref|XP_001466981.1| hypothetical protein [Leishmania infantum JPCM5] gi|134071345|emb|CAM70031.1| hypothetical protein, unknown function [Leishmania infantum JPCM5] Length = 1230 Score = 59.2 bits (142), Expect = 3e-07, Method: Composition-based stats. Identities = 17/102 (16%), Positives = 40/102 (39%), Gaps = 7/102 (6%) Query: 96 KDPCTIQEW-NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 + +++ + + + G G+NLQ +++V + Q + R+ Sbjct: 795 ERLTSVRRFREDPACLFFLLSIKAGGCGINLQ-AAHMVVLVDRDYTATNEDQALARV--- 850 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + G + V YL + ++ V QR K+ + ++N Sbjct: 851 --YRIGQRHTVRAVYLATTDASEQRVAQRAAAKNKPRQAIIN 890 >gi|302063935|ref|ZP_07255476.1| SNF2-related:helicase, C-terminal [Pseudomonas syringae pv. tomato K40] Length = 89 Score = 59.2 bits (142), Expect = 3e-07, Method: Composition-based stats. Identities = 22/79 (27%), Positives = 33/79 (41%), Gaps = 6/79 (7%) Query: 118 SCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 + G G NL N + F L W Q +R + G R V V +A +TID Sbjct: 2 AAGTGYNLT-AANYVFFLGLPWTPGLQDQAEDR-----AYRNGQLRMVVVKIPLADDTID 55 Query: 178 ELVLQRLRTKSTIQDLLLN 196 + + Q L K + L++ Sbjct: 56 QQLWQMLMDKRALASDLID 74 >gi|189198616|ref|XP_001935645.1| conserved hypothetical protein [Pyrenophora tritici-repentis Pt-1C-BFP] gi|187982744|gb|EDU48232.1| conserved hypothetical protein [Pyrenophora tritici-repentis Pt-1C-BFP] Length = 1218 Score = 59.2 bits (142), Expect = 3e-07, Method: Composition-based stats. Identities = 28/154 (18%), Positives = 55/154 (35%), Gaps = 18/154 (11%) Query: 45 EKHWKEVHDEKIKALEVIIEKANAA-PIIVAYHFNSDLARLQKAFP--------QGRTLD 95 K+ L + + A II+ Y ++ + + RTL+ Sbjct: 939 NTRLVGTTSAKLTYLLDKVMQHQATDKIIIFYDGDNAAFYIAQCLELMYVNHRIYARTLE 998 Query: 96 KD--PCTIQEWNE-GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIG 152 ++ +NE + +L A GLNL ++++ + Q I+R Sbjct: 999 NTLRSEYVRLFNEHPDVRVLLIDVACGALGLNL-NAASVVLIVNPINRPGLEAQAIKR-- 1055 Query: 153 VTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRT 186 + G + V V L+ +NTI+ + R + Sbjct: 1056 ---SHRIGQTKEVIVETLVLENTIEHAIFNRAKK 1086 >gi|327303100|ref|XP_003236242.1| hypothetical protein TERG_03291 [Trichophyton rubrum CBS 118892] gi|326461584|gb|EGD87037.1| hypothetical protein TERG_03291 [Trichophyton rubrum CBS 118892] Length = 2122 Score = 59.2 bits (142), Expect = 3e-07, Method: Composition-based stats. Identities = 31/158 (19%), Positives = 60/158 (37%), Gaps = 22/158 (13%) Query: 54 EKIKALEVIIEKANAAP----IIVAYHFNSDLARLQKAFPQGRTL-------DKDPCT-I 101 K A+ ++E P +++ F + KA D+ P + I Sbjct: 1927 SKFTAVIDLLEDTEKVPANDQVLLFIQFPELMEAASKALESASIPHTVIQPGDRTPTSKI 1986 Query: 102 QEWNEGKIPL----LFAHPAS-CGHGLNLQYGGNILVFFSL--WWDLEEHQQMIERIGVT 154 E+ GK + L + GLNLQ N ++FF ++ + + Sbjct: 1987 SEFQNGKESVKSKVLILNLGDVTASGLNLQN-ANHIIFFGPLVARSQYDYDSGMA-QAIG 2044 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQD 192 R R+ G + V +Y+++A T++ + + R K + Sbjct: 2045 RSRRYGQLKHVHIYHVLALKTVEVNIFE-QRKKQYLAK 2081 >gi|49257012|dbj|BAD24804.1| lymphoid specific helicase variant9 [Homo sapiens] Length = 809 Score = 59.2 bits (142), Expect = 3e-07, Method: Composition-based stats. Identities = 22/148 (14%), Positives = 52/148 (35%), Gaps = 26/148 (17%) Query: 50 EVHDEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEG 107 + K L+ ++ + +++ S L L D C ++++N Sbjct: 595 VTNSGKFLILDRMLPELKKRGHKVLLFSQMTSMLDILM-----------DYCHLRDFNFS 643 Query: 108 KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFV 167 ++ + + + + Q +R + G + V V Sbjct: 644 RLD--------GSMSYSEREKNMHSFNTDPEVNPQSDLQAQDRC-----HRIGQTKPVVV 690 Query: 168 YYLIAQNTIDELVLQRLRTKSTIQDLLL 195 Y L+ NTID+ +++R K ++ L++ Sbjct: 691 YRLVTANTIDQKIVERAAAKRKLEKLII 718 >gi|330931683|ref|XP_003303496.1| hypothetical protein PTT_15727 [Pyrenophora teres f. teres 0-1] gi|311320467|gb|EFQ88402.1| hypothetical protein PTT_15727 [Pyrenophora teres f. teres 0-1] Length = 735 Score = 59.2 bits (142), Expect = 3e-07, Method: Composition-based stats. Identities = 28/149 (18%), Positives = 60/149 (40%), Gaps = 22/149 (14%) Query: 51 VHDEKIKALEVIIEKANAAPIIVAYHF---NSDLARLQKAFPQGRTLDKDPCTIQEWNEG 107 + + +K L++I + I+A + D RL+ + ++ Sbjct: 578 ITSQYLKVLDMIKAALHERFGIIALEYNGVTPDSVRLENL-----------SQFKNYSHP 626 Query: 108 KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFV 167 +PLL + G G+N+Q +I++ +WW+ Q+ R+ + G V + Sbjct: 627 SVPLLL-SGKAGGEGINIQQ-ASIMIQTEIWWNRNAELQVYSRLL-----RPGQLHKVII 679 Query: 168 YYLIAQN-TIDELVLQRLRTKSTIQDLLL 195 L + +ID+ ++ K T +L+ Sbjct: 680 IRLQGKGCSIDDCIIGVQCRKKTTNTILM 708 >gi|241202956|ref|YP_002974052.1| helicase domain protein [Rhizobium leguminosarum bv. trifolii WSM1325] gi|240856846|gb|ACS54513.1| helicase domain protein [Rhizobium leguminosarum bv. trifolii WSM1325] Length = 1170 Score = 59.2 bits (142), Expect = 3e-07, Method: Composition-based stats. Identities = 38/218 (17%), Positives = 73/218 (33%), Gaps = 33/218 (15%) Query: 5 HKFQRELYCDLQGENIEAFNSA----------SKTVKCLQLANGAVYYDEEKHWKEVHDE 54 E L+ I+ +A + A V +++ W E+ Sbjct: 426 DDLSAEEQESLEENLIDDATAAKTVAELEAEIVILKGLEEQAKAVVASGQDRKWDEL-SR 484 Query: 55 KIKALEVIIEKANA-APIIVAYHFNSDLARLQKAFPQ-------------GRTLDKDPCT 100 ++ + + + II+ L LQ G D+ Sbjct: 485 ILQNNPEMRDASGRQRKIIIFSEHRDTLNYLQARIAGVLGNPDAIVTIHGGTHRDERRRL 544 Query: 101 IQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQA 159 + + + +L A + G G+NLQ N++V + L W+ +Q RI + Sbjct: 545 QALFRSDPDVRVLVA-TDAAGEGVNLQN-ANLMVNYDLPWNPNRLEQRFGRI-----HRI 597 Query: 160 GFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 G ++ L+A+ T + V RL K ++ L+ Sbjct: 598 GQTEVCHLWNLVAKETREGDVYHRLLLKLEVESQALHG 635 >gi|317028687|ref|XP_001390499.2| hypothetical protein ANI_1_1528034 [Aspergillus niger CBS 513.88] Length = 906 Score = 59.2 bits (142), Expect = 3e-07, Method: Composition-based stats. Identities = 27/150 (18%), Positives = 52/150 (34%), Gaps = 25/150 (16%) Query: 52 HDEKIKALEVII--------EKANAAPIIVAYHFNSDLARLQ----KAFPQGRTLDKDPC 99 KI+AL I EK ++ ++ L + + R +D Sbjct: 723 PSAKIRALLRNITKSRSISDEKGVQTKFVIFSYWTKMLDLIATALTENHLTFRRIDGRSS 782 Query: 100 TIQEWN-------EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIG 152 Q + + ++ A + G G++L +I + W+ Q I+R+ Sbjct: 783 LSQRKEALGVFGSDPQCIIMLASIGAAGEGIDLTAANSIHI-VEPQWNPMAEAQAIDRV- 840 Query: 153 VTRQRQAGFKRAVFVYYLIAQNTIDELVLQ 182 + G +R V V I +I+ +Q Sbjct: 841 ----HRIGQERDVEVVRYITSESIESEAIQ 866 >gi|134058188|emb|CAK38380.1| unnamed protein product [Aspergillus niger] Length = 961 Score = 59.2 bits (142), Expect = 3e-07, Method: Composition-based stats. Identities = 27/150 (18%), Positives = 52/150 (34%), Gaps = 25/150 (16%) Query: 52 HDEKIKALEVII--------EKANAAPIIVAYHFNSDLARLQ----KAFPQGRTLDKDPC 99 KI+AL I EK ++ ++ L + + R +D Sbjct: 712 PSAKIRALLRNITKSRSISDEKGVQTKFVIFSYWTKMLDLIATALTENHLTFRRIDGRSS 771 Query: 100 TIQEWN-------EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIG 152 Q + + ++ A + G G++L +I + W+ Q I+R+ Sbjct: 772 LSQRKEALGVFGSDPQCIIMLASIGAAGEGIDLTAANSIHI-VEPQWNPMAEAQAIDRV- 829 Query: 153 VTRQRQAGFKRAVFVYYLIAQNTIDELVLQ 182 + G +R V V I +I+ +Q Sbjct: 830 ----HRIGQERDVEVVRYITSESIESEAIQ 855 >gi|9367860|emb|CAB97530.1| RAD26L hypothetical protein, alternatively spliced product; similar to (AF217319) putative repair and recombination helicase RAD26L [Mus musculus] [Homo sapiens] Length = 365 Score = 59.2 bits (142), Expect = 3e-07, Method: Composition-based stats. Identities = 25/120 (20%), Positives = 48/120 (40%), Gaps = 15/120 (12%) Query: 53 DEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQK---------AFPQGRTLDKDP-CT 100 K+K L+ ++ + N +++ L LQ+ G T ++ Sbjct: 200 SGKMKVLQQLLNHCRKNRDKVLLFSFSTKLLDVLQQYCMASGLDYRRLDGSTKSEERLKI 259 Query: 101 IQEWNE-GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER-IGVTRQRQ 158 ++E+N + + A + G GLN G N++V F W+ Q I+R R+ + Sbjct: 260 VKEFNSTQDVNICLASTMAGGLGLNF-VGANVVVLFDPTWNPANDLQAIDRTQTHCRRER 318 >gi|291240565|ref|XP_002740192.1| PREDICTED: Chromodomain-helicase-DNA-binding protein 1-like [Saccoglossus kowalevskii] Length = 938 Score = 59.2 bits (142), Expect = 3e-07, Method: Composition-based stats. Identities = 27/182 (14%), Positives = 56/182 (30%), Gaps = 33/182 (18%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEV------HDEK 55 K Y + L +L G + ++ +L N E + K Sbjct: 768 KNYKALSKGLKGNLSGF-------LNIMMELKKLCNHPYLIRPEDNGITDLENLIRTSGK 820 Query: 56 IKALEVIIEKAN--AAPIIVAYHFNSDLARL-----QKAFPQGRTLDK-----DPCTIQE 103 + L+ ++ + + +++ L L K +P R + Sbjct: 821 VHLLDKLLTRLHETGHRVLIFSQMVRMLDILADYLSMKHWPFQRLDGSISSEVRKQALDH 880 Query: 104 WN-EGKIPL-LFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGF 161 +N EG + + G G+NL + ++ F W+ + Q R + G Sbjct: 881 FNAEGSMDFCFLLSTRAGGLGINL-ATADTVIIFDSDWNPQNDLQAQAR-----AHRIGQ 934 Query: 162 KR 163 + Sbjct: 935 RN 936 >gi|224077876|ref|XP_002305447.1| chromatin remodeling complex subunit [Populus trichocarpa] gi|222848411|gb|EEE85958.1| chromatin remodeling complex subunit [Populus trichocarpa] Length = 630 Score = 59.2 bits (142), Expect = 3e-07, Method: Composition-based stats. Identities = 25/152 (16%), Positives = 53/152 (34%), Gaps = 23/152 (15%) Query: 61 VIIEKANAAPIIVAYHFNSDLARLQKAFPQGR----------TLDKDPCTIQEW------ 104 + E A ++V + + L L++ + + + +EW Sbjct: 446 SLCESA-GEKLLVFSQYLTPLKFLERLVMKVKGWILGKEIFVISGESSSDHREWSMERFN 504 Query: 105 NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA 164 N + F +CG G++L G + ++ + + Q I R + G + Sbjct: 505 NSMDAKVFFGSIKACGEGISL-VGASRIIILDVHLNPSVTCQAIGR-----AFRPGQTKK 558 Query: 165 VFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 V+ Y L+A ++ +E K I + Sbjct: 559 VYAYRLVAADSPEEEDHTTCFRKEAIAKMWFE 590 >gi|87308613|ref|ZP_01090753.1| prophage LambdaMc01, helicase, SNF2 family protein [Blastopirellula marina DSM 3645] gi|87288705|gb|EAQ80599.1| prophage LambdaMc01, helicase, SNF2 family protein [Blastopirellula marina DSM 3645] Length = 493 Score = 59.2 bits (142), Expect = 3e-07, Method: Composition-based stats. Identities = 24/154 (15%), Positives = 58/154 (37%), Gaps = 22/154 (14%) Query: 48 WKEVHDEKIKALEV-IIEKANAAPIIVAYH-------FNSDLARLQKAFPQGRTLDKDPC 99 +E D K + ++ +++ A I+ F + L R + + Sbjct: 44 VRECPDLKWEFIKEKVVDLAGEEKIVFFAQPIETVTTFVNFLKR--EYGEDVSVIIGGQS 101 Query: 100 T------IQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGV 153 ++++ + + G G+NLQ LV + W+ + +Q + R+ Sbjct: 102 DAERSAEVEKFLKPDGARFLVSSKAGGEGINLQV-ARRLVHIDVPWNPMDMEQRVGRV-- 158 Query: 154 TRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTK 187 + G +R + V ++ +++ +E + R K Sbjct: 159 ---HRFGSRRNIVVDTIVVKDSREEHAYRAAREK 189 >gi|115524177|ref|YP_781088.1| helicase domain-containing protein [Rhodopseudomonas palustris BisA53] gi|115518124|gb|ABJ06108.1| helicase domain protein [Rhodopseudomonas palustris BisA53] Length = 953 Score = 59.2 bits (142), Expect = 3e-07, Method: Composition-based stats. Identities = 29/161 (18%), Positives = 62/161 (38%), Gaps = 25/161 (15%) Query: 49 KEVHDEKIKALEV----IIEKANAAPIIVAYHFNSDLARLQKAFPQ---GRTLDKDP--- 98 +E+ D K+ AL + + A +++ N L+ + + K Sbjct: 338 EELGDAKLDALIDHLRGLFSRDRDARVVIVAEDNPTTDYLRDGIEKLADVKVAKKRRIVG 397 Query: 99 -------------CTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQ 145 + ++ G+ +L A + G NLQ+ + ++FF+L W + Q Sbjct: 398 AAEKLEVHVADLKEALDDFISGEAKVLVAS-DAAREGHNLQF-ADEIIFFALPWSPPDIQ 455 Query: 146 QMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRT 186 Q I RI + R + + ++ + +I++ +L L Sbjct: 456 QWIGRIDRLGTKGRAANRRIAITPIVIEGSIEDQILAVLEG 496 >gi|258652709|ref|YP_003201865.1| helicase domain-containing protein [Nakamurella multipartita DSM 44233] gi|258555934|gb|ACV78876.1| helicase domain protein [Nakamurella multipartita DSM 44233] Length = 217 Score = 59.2 bits (142), Expect = 3e-07, Method: Composition-based stats. Identities = 24/97 (24%), Positives = 37/97 (38%), Gaps = 8/97 (8%) Query: 102 QEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLW-WDLEEHQQMIERIGVTRQRQAG 160 + G++ LL + G G+ L G + + + W E Q +R + G Sbjct: 89 DAYQAGRLSLLVCSIPTIGVGVTLTRGCD--AWMAETSWTPSEISQAEDRQW-----RRG 141 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 R V V I T+DE V L K+ D +L Sbjct: 142 QSRDVVVTTFIGVGTLDERVQDSLARKADDLDQVLTG 178 >gi|255941182|ref|XP_002561360.1| Pc16g10500 [Penicillium chrysogenum Wisconsin 54-1255] gi|211585983|emb|CAP93720.1| Pc16g10500 [Penicillium chrysogenum Wisconsin 54-1255] Length = 2162 Score = 59.2 bits (142), Expect = 3e-07, Method: Composition-based stats. Identities = 33/161 (20%), Positives = 58/161 (36%), Gaps = 23/161 (14%) Query: 47 HWKEVHDEKIKALEVII-EKANAAPIIVAYHFNSDLARLQKAFPQGRTLDK-----DPCT 100 + + K+ L II +I+ N L A + + Sbjct: 1972 EDQAIQSTKLDKLVEIIRNVPEDELVIIFVQINHLLPVASNALKAANIDHRMVTQTNLKG 2031 Query: 101 IQEW-NEGKIPLLFAHP------------ASCGHGLNLQYGGNILVFFSL--WWDLEEHQ 145 I E+ + K P S GLNLQ N ++F S ++ Sbjct: 2032 IDEFKDSPKPKKGTIQPPSRPKALILNLGTSMAAGLNLQC-ANHVIFLSPYFTTSHHDYD 2090 Query: 146 QMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRT 186 + + R R+ G +R V+VY+L+ +NT D + Q+ ++ Sbjct: 2091 SGM-TQAIGRARRFGQEREVYVYHLLVKNTYDVNIFQKAQS 2130 >gi|147834946|emb|CAN70202.1| hypothetical protein VITISV_021223 [Vitis vinifera] Length = 985 Score = 59.2 bits (142), Expect = 3e-07, Method: Composition-based stats. Identities = 29/140 (20%), Positives = 56/140 (40%), Gaps = 20/140 (14%) Query: 29 TVKCLQLA--NGAVYYDEEKHWKEVHDEKIKALEVIIE---KANAAPIIVAYHFNSDLAR 83 + + L L +GA + E W E+ K+ L ++ + I++ ++ L Sbjct: 518 SGRLLFLCVRSGA-WTGGEGIWVEL-SGKMHVLARLLAHLRQKTDDRIVLVSNYTQTLDL 575 Query: 84 L-----QKAFPQGRT-----LDKDPCTIQEWNEG--KIPLLFAHPASCGHGLNLQYGGNI 131 ++ +P R ++K + +N+ + + G GLNL GGN Sbjct: 576 FAQLCRERRYPYLRLDGTTSINKRQKLVNRFNDPLKDEFVFLLSSKAGGCGLNL-IGGNR 634 Query: 132 LVFFSLWWDLEEHQQMIERI 151 LV F W+ +Q+ +R Sbjct: 635 LVLFDPDWNPANDKQVFQRQ 654 >gi|115453047|ref|NP_001050124.1| Os03g0352500 [Oryza sativa Japonica Group] gi|113548595|dbj|BAF12038.1| Os03g0352500 [Oryza sativa Japonica Group] Length = 214 Score = 59.2 bits (142), Expect = 3e-07, Method: Composition-based stats. Identities = 16/46 (34%), Positives = 29/46 (63%) Query: 152 GVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + R + G + V VY LI ++TI+E +LQR + K+ +Q+L++ Sbjct: 1 AMDRTHRLGQTKEVTVYRLICKDTIEEKILQRAKQKNAVQELVMKG 46 >gi|119613043|gb|EAW92637.1| RAD26L hypothetical protein, isoform CRA_c [Homo sapiens] Length = 672 Score = 59.2 bits (142), Expect = 4e-07, Method: Composition-based stats. Identities = 24/120 (20%), Positives = 47/120 (39%), Gaps = 15/120 (12%) Query: 53 DEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQK---------AFPQGRTLDKDP-CT 100 K+K L+ ++ + N +++ L LQ+ G T ++ Sbjct: 507 SGKMKVLQQLLNHCRKNRDKVLLFSFSTKLLDVLQQYCMASGLDYRRLDGSTKSEERLKI 566 Query: 101 IQEWNE-GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER-IGVTRQRQ 158 ++E+N + + + G GLN G N++V F W+ Q I+R R+ + Sbjct: 567 VKEFNSTQDVNICLVSTMAGGLGLNF-VGANVVVLFDPTWNPANDLQAIDRTQTHCRRER 625 >gi|76156662|gb|AAX27825.2| SJCHGC07730 protein [Schistosoma japonicum] Length = 135 Score = 59.2 bits (142), Expect = 4e-07, Method: Composition-based stats. Identities = 20/83 (24%), Positives = 33/83 (39%), Gaps = 8/83 (9%) Query: 96 KDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGV 153 + I +N+ K P L + G+NL G N +V F W+ Q Sbjct: 56 EREKLINNFNDPKNPAKLFLMSTRAGCLGVNL-VGANRVVGFDASWNPCHDCQ-----SR 109 Query: 154 TRQRQAGFKRAVFVYYLIAQNTI 176 R + G + ++Y L + NT+ Sbjct: 110 CRVYRYGQVKPCYIYRLGSDNTM 132 >gi|323449101|gb|EGB04992.1| hypothetical protein AURANDRAFT_17564 [Aureococcus anophagefferens] Length = 76 Score = 59.2 bits (142), Expect = 4e-07, Method: Composition-based stats. Identities = 19/87 (21%), Positives = 33/87 (37%), Gaps = 15/87 (17%) Query: 106 EGKIPLLFAHPASCGHGLNLQYGGNILVF----FSLWWDLEEHQQMIERIGVTRQRQAGF 161 + + +L A+ G GLN+ +++ F E R + G Sbjct: 1 DPETSVLLLTLATAGVGLNITNANKVVILEPFRFG----------SNEAQAAMRVHRIGQ 50 Query: 162 KRAVFVYYLIAQNTIDELVLQRLRTKS 188 R V + + T+DE +L+ LR K Sbjct: 51 SRDVEIIKFFTRGTMDERLLK-LRHKR 76 >gi|297810883|ref|XP_002873325.1| SNF2 domain-containing protein [Arabidopsis lyrata subsp. lyrata] gi|297319162|gb|EFH49584.1| SNF2 domain-containing protein [Arabidopsis lyrata subsp. lyrata] Length = 1194 Score = 59.2 bits (142), Expect = 4e-07, Method: Composition-based stats. Identities = 32/139 (23%), Positives = 53/139 (38%), Gaps = 17/139 (12%) Query: 60 EVIIEKANAAPIIVAYHFNSDLARLQKAF---------PQGRTLDKDPC-TIQEWN-EGK 108 E I ++ ++V H + L +Q+ G TL +D +Q + + Sbjct: 551 EDIDGDTSSTKMVVFAHHHKVLDGIQEFMCDKGIGFVRIDGMTLPRDRQLAVQSFQFSSE 610 Query: 109 IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVY 168 + + + G GL+ N +VF L Q +R + G AV VY Sbjct: 611 VKVAIIGVEAGGVGLDFSAAQN-VVFLELPKTPSLLLQAEDR-----AHRRGQTSAVNVY 664 Query: 169 YLIAQNTIDELVLQRLRTK 187 A++T+DE Q L K Sbjct: 665 IFCAKDTMDESNWQNLNKK 683 >gi|218200266|gb|EEC82693.1| hypothetical protein OsI_27351 [Oryza sativa Indica Group] Length = 1547 Score = 59.2 bits (142), Expect = 4e-07, Method: Composition-based stats. Identities = 17/79 (21%), Positives = 34/79 (43%), Gaps = 6/79 (7%) Query: 110 PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYY 169 +L +GLNL + ++ + Q I RI + G ++ F++ Sbjct: 1400 QVLLMLIQHGANGLNLLEAQH-VILVEPLLNPAAEAQAISRI-----HRVGQDKSTFIHR 1453 Query: 170 LIAQNTIDELVLQRLRTKS 188 I +NTI+E + + R ++ Sbjct: 1454 FIVKNTIEESIYKLNRGRA 1472 >gi|75908408|ref|YP_322704.1| type III restriction enzyme, res subunit [Anabaena variabilis ATCC 29413] gi|75702133|gb|ABA21809.1| type III restriction enzyme, res subunit [Anabaena variabilis ATCC 29413] Length = 1172 Score = 59.2 bits (142), Expect = 4e-07, Method: Composition-based stats. Identities = 26/164 (15%), Positives = 59/164 (35%), Gaps = 20/164 (12%) Query: 45 EKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDL----ARLQKAFPQGRT------- 93 +K W+E+ + E+ + + +++ L R++ + Sbjct: 484 DKKWEELSNLLQNNAEMFNAEGHRRKLVIFTEHRDTLNYLTDRIRTLLGRNEAVVTIHGA 543 Query: 94 --LDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERI 151 ++ + + + + G G+NLQ +++V + L W+ +Q RI Sbjct: 544 MGREERRKAQDAFTQDIEVQVLIATDAAGEGINLQR-AHLMVNYDLPWNPNRLEQRFGRI 602 Query: 152 GVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTK-STIQDLL 194 + G ++ L+A++T + V L K Q L Sbjct: 603 -----HRIGQTEVCHLWNLLAKDTREGDVYLALLKKVEAEQKAL 641 >gi|134288138|ref|YP_001110302.1| SNF2-related protein [Burkholderia vietnamiensis G4] gi|134132788|gb|ABO60414.1| SNF2-related protein [Burkholderia vietnamiensis G4] Length = 599 Score = 58.8 bits (141), Expect = 4e-07, Method: Composition-based stats. Identities = 30/137 (21%), Positives = 54/137 (39%), Gaps = 15/137 (10%) Query: 68 AAPIIVAYHFNSDLARLQKAFPQGR--------TLDKDPCTIQEWNEGKIPLLFAHPASC 119 P +V H + + LQ R T D+ + + +G+ L + Sbjct: 422 GEPTVVFAHHHDVVDYLQAELADFRPVLITGRQTEDQKWIAKESFIKGESLLCIVALRAA 481 Query: 120 GHGLN-LQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDE 178 G++ LQ + VF L W H+Q +R+ + G + V YYL++ +D Sbjct: 482 -TGIDGLQSRARVAVFAELDWSPAIHKQAEDRL-----HRDGQQNPVLCYYLVSDAGVDP 535 Query: 179 LVLQRLRTKSTIQDLLL 195 +L+ L K+ L+ Sbjct: 536 DMLENLGAKAQQFIGLM 552 >gi|303288742|ref|XP_003063659.1| predicted protein [Micromonas pusilla CCMP1545] gi|226454727|gb|EEH52032.1| predicted protein [Micromonas pusilla CCMP1545] Length = 518 Score = 58.8 bits (141), Expect = 4e-07, Method: Composition-based stats. Identities = 26/141 (18%), Positives = 55/141 (39%), Gaps = 20/141 (14%) Query: 59 LEVIIEKANAAPIIVAYHFNSDL----------ARLQKAFPQGRTLDK-DPCTIQEWNEG 107 LE +I+ + + +++L ++Q G T ++ + Sbjct: 379 LETLIDGGADK--FLFFAHHAELLDAAAATLKKRKIQHIRIDGSTPSTARGKLVETFQTV 436 Query: 108 K-IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVF 166 + + + G GL L + ++F L W E Q +R + G +V Sbjct: 437 DAVRVAVLSIKAAGVGLTLT-AASAVIFGELSWTPGEIVQAEDR-----AHRIGQVNSVS 490 Query: 167 VYYLIAQNTIDELVLQRLRTK 187 V +L A+NT+D+++ ++ K Sbjct: 491 VQFLCARNTVDDIMWGSVQNK 511 >gi|42780097|ref|NP_977344.1| SNF2 family helicase [Bacillus cereus ATCC 10987] gi|4584117|emb|CAB40614.1| SNF2-like helicase [Bacillus cereus ATCC 10987] gi|42736015|gb|AAS39952.1| helicase, SNF2 family [Bacillus cereus ATCC 10987] Length = 631 Score = 58.8 bits (141), Expect = 4e-07, Method: Composition-based stats. Identities = 34/211 (16%), Positives = 82/211 (38%), Gaps = 30/211 (14%) Query: 13 CDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKA--NAAP 70 L + + + + ++A Y + + K + +I Sbjct: 413 LGLLDDEFDLTQVNALNDEEREIARIRAYQQLQVDI--IPSAKFEKGIQLIMDLVGKGKK 470 Query: 71 IIVAYHFNSDLARLQKAFPQ----------GRTLDKDPCTIQEWNEGKIPLLFAHPASCG 120 +IV F + ++++ Q G D+ I ++ +G++ ++ ++P + G Sbjct: 471 VIVWGMFVKTMQKIKQVLQQKGVSVNLVYGGTPKDERVKLINDFRDGEVEVMISNPNTLG 530 Query: 121 HGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVF--VYYLIAQNT--- 175 ++L + ++F ++L Q +RI + G K + YYL+ + Sbjct: 531 ESISLHQTVHDAIYFEYNFNLTFMLQSRDRI-----HRLGLKDDQYTRYYYLMTEGDRAH 585 Query: 176 ---IDELVLQRLRTKSTIQDLLLNALKKETI 203 ID+ + +RL+ K + +L+A+ E + Sbjct: 586 GGFIDQAIYKRLKEKEQV---MLDAIDGELL 613 >gi|170086666|ref|XP_001874556.1| predicted protein [Laccaria bicolor S238N-H82] gi|164649756|gb|EDR13997.1| predicted protein [Laccaria bicolor S238N-H82] Length = 1926 Score = 58.8 bits (141), Expect = 4e-07, Method: Composition-based stats. Identities = 38/197 (19%), Positives = 73/197 (37%), Gaps = 24/197 (12%) Query: 13 CDLQGENIEAFNSASKTV-KCLQLANG-AVYYDEEKHWKEV--HDEKIKALEVIIEKA-- 66 C + E + A + A K+ + L + G + D+E K++ + +I K Sbjct: 1732 CAEKEECVHAASGACKSAARVLNVVRGDTLGVDDEARDGHGRHFGLKLEKVIDLIRKKIP 1791 Query: 67 NAAPIIVAYHFNSDLAR----------LQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHP 116 +++ F DL + ++ +G K N + +L + Sbjct: 1792 KDERVLLFVQF-PDLMKKVTEALAVNKIKYLEIKGTAHQKSKNLELFQNGSEERVLLLNV 1850 Query: 117 A-SCGHGLNLQYGGNILVFFSL--WWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQ 173 G NL N +F S E + E + R + G +R V+V+ + Sbjct: 1851 MDESASGANLT-SANHAIFLSPLLAPSQEIYN-ACETQAIGRLVRYGQERHVYVWRFLTT 1908 Query: 174 NTIDELVLQRLRTKSTI 190 NTIDE + + + K+ + Sbjct: 1909 NTIDEEIYE--QRKAAV 1923 >gi|75674449|ref|YP_316870.1| helicase [Nitrobacter winogradskyi Nb-255] gi|74419319|gb|ABA03518.1| Superfamily II DNA/RNA helicase, SNF2 family [Nitrobacter winogradskyi Nb-255] Length = 541 Score = 58.8 bits (141), Expect = 4e-07, Method: Composition-based stats. Identities = 28/119 (23%), Positives = 52/119 (43%), Gaps = 8/119 (6%) Query: 84 LQKAFPQGRTLDKDPCTIQEW--NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDL 141 L+ G + ++ TI + N +I + G+NLQ N+L+ F L W+ Sbjct: 341 LKVGIINGSSGQRNQDTIARFRGNPPEIR-AIVSTEAGSEGVNLQI-ANVLINFDLPWNP 398 Query: 142 EEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKK 200 +Q I R+ QR + V +Y ++ T +E ++ RL TK + + ++ Sbjct: 399 MIVEQRIGRV----QRLGSQHKNVVIYNVMLAGTFEEYIVGRLMTKLQMATDAIGDIES 453 >gi|195108187|ref|XP_001998674.1| GI23502 [Drosophila mojavensis] gi|193915268|gb|EDW14135.1| GI23502 [Drosophila mojavensis] Length = 120 Score = 58.8 bits (141), Expect = 4e-07, Method: Composition-based stats. Identities = 29/106 (27%), Positives = 44/106 (41%), Gaps = 8/106 (7%) Query: 93 TLDKDPCTIQEWNEGKIP-LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERI 151 T TI+ +NE P +L GLNL ++LV S W + Q I R+ Sbjct: 4 TSSNTQDTIKNFNESDEPCVLLLTLGLAKSGLNLYGANSLLVMDSHWNPHLKPQSAIYRM 63 Query: 152 GVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 R V VY L+ ++T+D + Q + K + +L A Sbjct: 64 D-------QRNRNVSVYQLVCKDTVDGTIQQVQQNKLNLAFQVLRA 102 >gi|169260103|gb|ACA51933.1| DNA methylase [Streptococcus equinus] Length = 908 Score = 58.8 bits (141), Expect = 4e-07, Method: Composition-based stats. Identities = 23/98 (23%), Positives = 39/98 (39%), Gaps = 4/98 (4%) Query: 90 QGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIE 149 T DK ++ N G++ +L A G GLN+Q + + W + Q Sbjct: 539 DANTDDKKNSLSRKVNSGEVRILMASTEKGGTGLNVQSRMKAVHHLDVPWRPSDIVQRNG 598 Query: 150 RIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTK 187 R+ RQ + V +Y+ I + + D + Q K Sbjct: 599 RLI----RQGNMHQEVDIYHYITKGSFDNYLWQTQENK 632 >gi|167998999|ref|XP_001752205.1| SNF2 family DNA-dependent ATPase [Physcomitrella patens subsp. patens] gi|162696600|gb|EDQ82938.1| SNF2 family DNA-dependent ATPase [Physcomitrella patens subsp. patens] Length = 1520 Score = 58.8 bits (141), Expect = 4e-07, Method: Composition-based stats. Identities = 18/84 (21%), Positives = 35/84 (41%), Gaps = 6/84 (7%) Query: 106 EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 +G + +L +GLNL ++++ +E + R + G RA Sbjct: 1374 QGPVQVLLMPIRHGANGLNLVEAQHVMLL------EPLLNPAMEAQAINRVHRIGQTRAT 1427 Query: 166 FVYYLIAQNTIDELVLQRLRTKST 189 FV+ I +T++E + R K+ Sbjct: 1428 FVHRFIVHDTVEESIYGLRRQKAM 1451 >gi|154287644|ref|XP_001544617.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1] gi|150408258|gb|EDN03799.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1] Length = 1117 Score = 58.8 bits (141), Expect = 4e-07, Method: Composition-based stats. Identities = 23/118 (19%), Positives = 48/118 (40%), Gaps = 12/118 (10%) Query: 83 RLQKAFPQGRTLDKDPCTIQEWNEGK-IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDL 141 R+ + +T + +NE + + +L HGL++ + + + WD Sbjct: 865 RIYANTLKTKTR---SEYLSLFNETESVRVLLMDLRQAAHGLHI-ACASRVFIVNPIWDP 920 Query: 142 EEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 Q I+R + + V+V L+ + T+++ +L+R K L +A K Sbjct: 921 NFESQAIKR-----AHRISQNKPVYVETLVLKGTLEDRMLRR--RKQMSNAELRHAEK 971 >gi|228482586|gb|ACQ43545.1| brahma-like protein [Anopheles quadriannulatus] gi|228482588|gb|ACQ43546.1| brahma-like protein [Anopheles arabiensis] gi|228482590|gb|ACQ43547.1| brahma-like protein [Anopheles arabiensis] gi|228482592|gb|ACQ43548.1| brahma-like protein [Anopheles quadriannulatus] gi|228482594|gb|ACQ43549.1| brahma-like protein [Anopheles gambiae S] gi|228482596|gb|ACQ43550.1| brahma-like protein [Anopheles gambiae S] gi|228482598|gb|ACQ43551.1| brahma-like protein [Anopheles gambiae S] gi|228482600|gb|ACQ43552.1| brahma-like protein [Anopheles gambiae S] gi|228482602|gb|ACQ43553.1| brahma-like protein [Anopheles gambiae S] gi|228482604|gb|ACQ43554.1| brahma-like protein [Anopheles gambiae S] gi|228482606|gb|ACQ43555.1| brahma-like protein [Anopheles gambiae S] gi|228482608|gb|ACQ43556.1| brahma-like protein [Anopheles gambiae M] gi|228482610|gb|ACQ43557.1| brahma-like protein [Anopheles gambiae S] gi|228482612|gb|ACQ43558.1| brahma-like protein [Anopheles gambiae S] gi|228482614|gb|ACQ43559.1| brahma-like protein [Anopheles gambiae M] gi|228482616|gb|ACQ43560.1| brahma-like protein [Anopheles gambiae S] gi|228482618|gb|ACQ43561.1| brahma-like protein [Anopheles gambiae M] gi|228482620|gb|ACQ43562.1| brahma-like protein [Anopheles gambiae M] gi|228482622|gb|ACQ43563.1| brahma-like protein [Anopheles gambiae S] gi|228482624|gb|ACQ43564.1| brahma-like protein [Anopheles gambiae S] gi|228482626|gb|ACQ43565.1| brahma-like protein [Anopheles gambiae M] gi|228482628|gb|ACQ43566.1| brahma-like protein [Anopheles gambiae S] gi|228482630|gb|ACQ43567.1| brahma-like protein [Anopheles gambiae M] gi|228482632|gb|ACQ43568.1| brahma-like protein [Anopheles gambiae M] gi|228482634|gb|ACQ43569.1| brahma-like protein [Anopheles gambiae M] gi|228482636|gb|ACQ43570.1| brahma-like protein [Anopheles gambiae M] gi|228482638|gb|ACQ43571.1| brahma-like protein [Anopheles gambiae M] gi|228482640|gb|ACQ43572.1| brahma-like protein [Anopheles gambiae M] gi|228482642|gb|ACQ43573.1| brahma-like protein [Anopheles quadriannulatus] gi|228482644|gb|ACQ43574.1| brahma-like protein [Anopheles arabiensis] gi|228482646|gb|ACQ43575.1| brahma-like protein [Anopheles arabiensis] gi|228482648|gb|ACQ43576.1| brahma-like protein [Anopheles quadriannulatus] gi|228482650|gb|ACQ43577.1| brahma-like protein [Anopheles gambiae S] gi|228482652|gb|ACQ43578.1| brahma-like protein [Anopheles gambiae S] gi|228482654|gb|ACQ43579.1| brahma-like protein [Anopheles gambiae S] gi|228482656|gb|ACQ43580.1| brahma-like protein [Anopheles gambiae S] gi|228482658|gb|ACQ43581.1| brahma-like protein [Anopheles gambiae S] gi|228482660|gb|ACQ43582.1| brahma-like protein [Anopheles gambiae S] gi|228482662|gb|ACQ43583.1| brahma-like protein [Anopheles gambiae S] gi|228482664|gb|ACQ43584.1| brahma-like protein [Anopheles gambiae M] gi|228482666|gb|ACQ43585.1| brahma-like protein [Anopheles gambiae S] gi|228482668|gb|ACQ43586.1| brahma-like protein [Anopheles gambiae S] gi|228482670|gb|ACQ43587.1| brahma-like protein [Anopheles gambiae M] gi|228482672|gb|ACQ43588.1| brahma-like protein [Anopheles gambiae S] gi|228482674|gb|ACQ43589.1| brahma-like protein [Anopheles gambiae M] gi|228482676|gb|ACQ43590.1| brahma-like protein [Anopheles gambiae M] gi|228482678|gb|ACQ43591.1| brahma-like protein [Anopheles gambiae S] gi|228482680|gb|ACQ43592.1| brahma-like protein [Anopheles gambiae S] gi|228482682|gb|ACQ43593.1| brahma-like protein [Anopheles gambiae M] gi|228482684|gb|ACQ43594.1| brahma-like protein [Anopheles gambiae S] gi|228482686|gb|ACQ43595.1| brahma-like protein [Anopheles gambiae M] gi|228482688|gb|ACQ43596.1| brahma-like protein [Anopheles gambiae M] gi|228482690|gb|ACQ43597.1| brahma-like protein [Anopheles gambiae M] gi|228482692|gb|ACQ43598.1| brahma-like protein [Anopheles gambiae M] gi|228482694|gb|ACQ43599.1| brahma-like protein [Anopheles gambiae M] gi|228482696|gb|ACQ43600.1| brahma-like protein [Anopheles gambiae M] Length = 270 Score = 58.8 bits (141), Expect = 4e-07, Method: Composition-based stats. Identities = 21/125 (16%), Positives = 43/125 (34%), Gaps = 20/125 (16%) Query: 52 HDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQ---------KAFPQGRTLDKDPCT 100 K + L+ I+ K A +++ + ++ G T ++ Sbjct: 152 ASGKFELLDRILPKLKATGHRVLLFCQMTQCMTIIEDYLSWRGFGYLRLDGTTKSEERGD 211 Query: 101 I-QEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 + +++N L + G GLNLQ + +V F W+ + Q R Sbjct: 212 LLKKFNSKNSDYFLFLLSTRAGGLGLNLQT-ADTVVIFDSDWNPHQDLQA-----QDRAH 265 Query: 158 QAGFK 162 + G + Sbjct: 266 RIGQR 270 >gi|297744768|emb|CBI38030.3| unnamed protein product [Vitis vinifera] Length = 856 Score = 58.8 bits (141), Expect = 4e-07, Method: Composition-based stats. Identities = 21/130 (16%), Positives = 51/130 (39%), Gaps = 22/130 (16%) Query: 65 KANAAPIIVAYHFNSDLARLQKAFPQGR---------------TLDKDPCTIQEWN-EGK 108 +++ ++V + L L+K + + + ++ +++ +N Sbjct: 669 QSSGEKLLVFSQYLLPLRFLEKLTMKVKGWSPGKEIFAISGESSSEQREWSMERFNTSPD 728 Query: 109 IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVY 168 + F +CG G++L +L+ + R + R + G K+ V VY Sbjct: 729 ARVFFGSIKACGEGISLVGASRVLILD------VHLNPSVTRQAIGRAFRPGQKKKVHVY 782 Query: 169 YLIAQNTIDE 178 L+A ++ +E Sbjct: 783 KLVAADSPEE 792 >gi|147773526|emb|CAN62867.1| hypothetical protein VITISV_015925 [Vitis vinifera] Length = 1187 Score = 58.8 bits (141), Expect = 4e-07, Method: Composition-based stats. Identities = 21/130 (16%), Positives = 51/130 (39%), Gaps = 22/130 (16%) Query: 65 KANAAPIIVAYHFNSDLARLQKAFPQGR---------------TLDKDPCTIQEWN-EGK 108 +++ ++V + L L+K + + + ++ +++ +N Sbjct: 948 QSSGEKLLVFSQYLLPLRFLEKLTMKVKGWSPGKEIFAISGESSSEQREWSMERFNTSPD 1007 Query: 109 IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVY 168 + F +CG G++L +L+ + R + R + G K+ V VY Sbjct: 1008 ARVFFGSIKACGEGISLVGASRVLILD------VHLNPSVTRQAIGRAFRPGQKKKVHVY 1061 Query: 169 YLIAQNTIDE 178 L+A ++ +E Sbjct: 1062 KLVAADSPEE 1071 >gi|154281551|ref|XP_001541588.1| predicted protein [Ajellomyces capsulatus NAm1] gi|150411767|gb|EDN07155.1| predicted protein [Ajellomyces capsulatus NAm1] Length = 550 Score = 58.8 bits (141), Expect = 4e-07, Method: Composition-based stats. Identities = 26/165 (15%), Positives = 57/165 (34%), Gaps = 21/165 (12%) Query: 45 EKHWKEVHDEKIKALEVIIEK----ANAAPIIVAYHFNSDLAR----------LQKAFPQ 90 + W+E K+ L +++ A +++ F DL + Sbjct: 352 GEKWQEYGGTKLLELTRLVQDTERIAEDEQVLLFIQF-PDLMEAASAALQKANIPHLMIS 410 Query: 91 GRTLDKDPCTIQEWNEGKI---PLLFAHPAS-CGHGLNLQYGGNILVFFSL-WWDLEEHQ 145 + + +L H GLNLQ +++ F L ++ Sbjct: 411 VNDRTSSSKIAEFQTRAEKVGSKVLILHLGDVSASGLNLQNANHVIFFHPLFTKSQYDYN 470 Query: 146 QMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 + R R+ G ++ V +Y+ +A TI+ + ++ R + + Sbjct: 471 SGMA-QATGRSRRYGQQKHVHIYHFLALKTIEVNIFEQRRRERLV 514 >gi|222637695|gb|EEE67827.1| hypothetical protein OsJ_25598 [Oryza sativa Japonica Group] Length = 1663 Score = 58.8 bits (141), Expect = 4e-07, Method: Composition-based stats. Identities = 17/79 (21%), Positives = 34/79 (43%), Gaps = 6/79 (7%) Query: 110 PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYY 169 +L +GLNL + ++ + Q I RI + G ++ F++ Sbjct: 1516 QVLLMLIQHGANGLNLLEAQH-VILVEPLLNPAAEAQAISRI-----HRVGQDKSTFIHR 1569 Query: 170 LIAQNTIDELVLQRLRTKS 188 I +NTI+E + + R ++ Sbjct: 1570 FIVKNTIEESIYKLNRGRA 1588 >gi|331028047|ref|YP_004421762.1| DNA methylase [Synechococcus phage S-CBS3] gi|294805660|gb|ADF42498.1| DNA methylase [Synechococcus phage S-CBS3] Length = 754 Score = 58.8 bits (141), Expect = 4e-07, Method: Composition-based stats. Identities = 20/103 (19%), Positives = 49/103 (47%), Gaps = 8/103 (7%) Query: 104 WNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKR 163 + +G I +L + P+ CG G+N Q + + F L E Q I R + G ++ Sbjct: 341 FQQGTIRVLVSKPSICGFGMNFQQ-CHNVAFVGLSHSYEAFYQAIRRCW-----RYGQQQ 394 Query: 164 AVFVYYL--IAQNTIDELVLQRLRTKSTIQDLLLNALKKETIH 204 V + + +A+ + + + ++ + + + +++ +K+ T+ Sbjct: 395 PVQAHIIYDVAEGAVVQNIRRKESESTAMAEAMVSIMKESTMQ 437 >gi|327348877|gb|EGE77734.1| SNF2 family helicase [Ajellomyces dermatitidis ATCC 18188] Length = 2158 Score = 58.8 bits (141), Expect = 4e-07, Method: Composition-based stats. Identities = 31/166 (18%), Positives = 64/166 (38%), Gaps = 21/166 (12%) Query: 44 EEKHWKEVHDEKIKALEVIIEK----ANAAPIIVAYHFNSDLARLQKAFPQG-------- 91 ++ W+ K+ L +I+ A +++ F+ + A Q Sbjct: 1959 SDEKWQGYRGTKLLELIRLIQDTDRIAEDEQVLLFIQFSDLMESASAALQQANIPHLMIP 2018 Query: 92 RTLDKDPCTIQEWNEG----KIPLLFAHPAS-CGHGLNLQYGGNILVFFSLWW--DLEEH 144 T I ++ G K +L H GLNLQ N ++FF + ++ Sbjct: 2019 ATDRMASSKIAQFQTGTEKVKSKVLILHLGDVSASGLNLQN-ANHVIFFHPLFAKSQYDY 2077 Query: 145 QQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 + + R R+ G ++ V +Y+ +A TI+ + ++ R + + Sbjct: 2078 NSGMA-QAIGRSRRYGQQKHVHIYHFLALKTIEVNIFEQRRQERLV 2122 >gi|239610686|gb|EEQ87673.1| SNF2 family helicase [Ajellomyces dermatitidis ER-3] Length = 1945 Score = 58.8 bits (141), Expect = 4e-07, Method: Composition-based stats. Identities = 31/166 (18%), Positives = 64/166 (38%), Gaps = 21/166 (12%) Query: 44 EEKHWKEVHDEKIKALEVIIEK----ANAAPIIVAYHFNSDLARLQKAFPQG-------- 91 ++ W+ K+ L +I+ A +++ F+ + A Q Sbjct: 1746 SDEKWQGYRGTKLLELIRLIQDTDRIAEDEQVLLFIQFSDLMESASAALQQANIPHLMIP 1805 Query: 92 RTLDKDPCTIQEWNEG----KIPLLFAHPAS-CGHGLNLQYGGNILVFFSLWW--DLEEH 144 T I ++ G K +L H GLNLQ N ++FF + ++ Sbjct: 1806 ATDRMASSKIAQFQTGTEKVKSKVLILHLGDVSASGLNLQN-ANHVIFFHPLFAKSQYDY 1864 Query: 145 QQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 + + R R+ G ++ V +Y+ +A TI+ + ++ R + + Sbjct: 1865 NSGMA-QAIGRSRRYGQQKHVHIYHFLALKTIEVNIFEQRRQERLV 1909 >gi|261195100|ref|XP_002623954.1| SNF2 family helicase [Ajellomyces dermatitidis SLH14081] gi|239587826|gb|EEQ70469.1| SNF2 family helicase [Ajellomyces dermatitidis SLH14081] Length = 1894 Score = 58.8 bits (141), Expect = 4e-07, Method: Composition-based stats. Identities = 31/166 (18%), Positives = 64/166 (38%), Gaps = 21/166 (12%) Query: 44 EEKHWKEVHDEKIKALEVIIEK----ANAAPIIVAYHFNSDLARLQKAFPQG-------- 91 ++ W+ K+ L +I+ A +++ F+ + A Q Sbjct: 1695 SDEKWQGYRGTKLLELIRLIQDTDRIAEDEQVLLFIQFSDLMESASAALQQANIPHLMIP 1754 Query: 92 RTLDKDPCTIQEWNEG----KIPLLFAHPAS-CGHGLNLQYGGNILVFFSLWW--DLEEH 144 T I ++ G K +L H GLNLQ N ++FF + ++ Sbjct: 1755 ATDRMASSKIAQFQTGTEKVKSKVLILHLGDVSASGLNLQN-ANHVIFFHPLFAKSQYDY 1813 Query: 145 QQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 + + R R+ G ++ V +Y+ +A TI+ + ++ R + + Sbjct: 1814 NSGMA-QAIGRSRRYGQQKHVHIYHFLALKTIEVNIFEQRRQERLV 1858 >gi|224003263|ref|XP_002291303.1| predicted protein [Thalassiosira pseudonana CCMP1335] gi|220973079|gb|EED91410.1| predicted protein [Thalassiosira pseudonana CCMP1335] Length = 69 Score = 58.8 bits (141), Expect = 4e-07, Method: Composition-based stats. Identities = 16/73 (21%), Positives = 30/73 (41%), Gaps = 7/73 (9%) Query: 117 ASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFK-RAVFVYYLIAQNT 175 + G GLNL ++ + WW+ Q + RI + G K V V + ++ Sbjct: 2 KAGGVGLNLVAASSVFIL-DPWWNASVEDQCVNRI-----HRIGQKAEVVRVRKFVVTDS 55 Query: 176 IDELVLQRLRTKS 188 ++E ++ K Sbjct: 56 VEEKIVSLQGKKK 68 >gi|152982150|ref|YP_001354424.1| ATP-dependent RNA helicase [Janthinobacterium sp. Marseille] gi|151282227|gb|ABR90637.1| ATP-dependent RNA helicase [Janthinobacterium sp. Marseille] Length = 1173 Score = 58.8 bits (141), Expect = 4e-07, Method: Composition-based stats. Identities = 37/203 (18%), Positives = 67/203 (33%), Gaps = 33/203 (16%) Query: 14 DLQGENIEAFNSASKTVKCLQLANGAVYYDE-----EKHWKEVHDEKIKALEVII----- 63 D + + A+ +L + D ++ D K L ++ Sbjct: 438 DYENFEETVVDQATAAQTIQELEAEIIILDALEEQAKQVVHSGQDRKWDELSSLLQSPTM 497 Query: 64 --EKANAAPIIVAYHFNSDLARLQKA------------FPQGRTLDKDPCTIQEW--NEG 107 E +I+ L L G ++ +QE N+ Sbjct: 498 REESGRQRKLIIFTEHRDTLNYLAVKIRGLIGNEDAVTMIHGGIKREERRKVQELFRNDP 557 Query: 108 KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFV 167 +L A + G G+NLQ N++V + L W+ +Q RI + G + Sbjct: 558 ATRVLLA-TDAAGEGVNLQN-ANLMVNYDLPWNPNRLEQRFGRI-----HRIGQTEVCHL 610 Query: 168 YYLIAQNTIDELVLQRLRTKSTI 190 + ++A T + V QRL K + Sbjct: 611 WNMVAAETREGDVFQRLFEKLEV 633 >gi|171684657|ref|XP_001907270.1| hypothetical protein [Podospora anserina S mat+] gi|170942289|emb|CAP67941.1| unnamed protein product [Podospora anserina S mat+] Length = 1139 Score = 58.8 bits (141), Expect = 4e-07, Method: Composition-based stats. Identities = 30/155 (19%), Positives = 59/155 (38%), Gaps = 20/155 (12%) Query: 49 KEVHDEKIKALEV--IIEKANAAPII------VAYHFNSDLARLQ-KAFPQGRTL--DKD 97 K+ L I + + II VAY+ L LQ + R L + Sbjct: 864 ISTASAKLSYLIDQVIKYQEHEQIIIFYENDNVAYYLAGVLEILQVQHLIYARGLSPQRR 923 Query: 98 PCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 + +N K +L GL++ + + F + + + Q I R Sbjct: 924 ADYVATFNQSSKFRVLLMDITQAAFGLDM-KSASRIYFINPVLNPQVEAQAIGR-----A 977 Query: 157 RQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQ 191 R+ ++ V V L+ +++++E++++R K Q Sbjct: 978 RRISQQKPVTVETLVLKDSVEEVIVRR--RKEMTQ 1010 >gi|296421314|ref|XP_002840210.1| hypothetical protein [Tuber melanosporum Mel28] gi|295636424|emb|CAZ84401.1| unnamed protein product [Tuber melanosporum] Length = 1119 Score = 58.8 bits (141), Expect = 5e-07, Method: Composition-based stats. Identities = 22/152 (14%), Positives = 45/152 (29%), Gaps = 18/152 (11%) Query: 47 HWKEVHDEKIKALEV-IIEKANAAPIIVAYHFNSDLARLQKAFPQGRTL----------- 94 +K+ L ++E I++ Y + + Sbjct: 814 EIIGTASQKLTYLLDKVLEYHETEKILIFYESEDVAFYIAQGLEIIGVEYLGYQKNLPSH 873 Query: 95 DKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 +K + + + GLN+ + + F + W Q + R Sbjct: 874 EKAKYLVTFQFSQTFRVFLMDLSQAAFGLNI-SAASRIFFVNPVWQPSVEHQALAR---- 928 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRT 186 + G KR V+ LI +TI+ + R + Sbjct: 929 -AHRIGQKRPVYAETLILNHTIEREMWDRRQG 959 >gi|157872353|ref|XP_001684725.1| hypothetical protein [Leishmania major strain Friedlin] gi|68127795|emb|CAJ06200.1| hypothetical protein LMJF_30_1300 [Leishmania major strain Friedlin] Length = 1235 Score = 58.8 bits (141), Expect = 5e-07, Method: Composition-based stats. Identities = 21/127 (16%), Positives = 52/127 (40%), Gaps = 7/127 (5%) Query: 71 IIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEW-NEGKIPLLFAHPASCGHGLNLQYGG 129 ++V Y ++ A + G + + +++ + + + G G+NLQ Sbjct: 775 LLVDYLYSRGWADHAEVLTGGSSEAERLTSVRRFREDPGCLFFLLSIKAGGCGINLQ-AA 833 Query: 130 NILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKST 189 +++V + + Q + R+ + G + V YL ++ ++ V QR K+ Sbjct: 834 HMVVLVDRDYTVTNEDQALARV-----YRIGQRYTVRAVYLATTDSSEQHVAQRATAKNK 888 Query: 190 IQDLLLN 196 + ++N Sbjct: 889 PRQAIIN 895 >gi|229578385|ref|YP_002836783.1| helicase domain protein [Sulfolobus islandicus Y.G.57.14] gi|228009099|gb|ACP44861.1| helicase domain protein [Sulfolobus islandicus Y.G.57.14] Length = 895 Score = 58.8 bits (141), Expect = 5e-07, Method: Composition-based stats. Identities = 24/152 (15%), Positives = 56/152 (36%), Gaps = 22/152 (14%) Query: 52 HDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQG-------------RTLDK 96 D ++KAL ++ +I+ + + T+++ Sbjct: 378 SDSRVKALINLVGTHLNKGDKVIIFTEYKDTANYILGKLKDALNLTDREIKVVTSVTINQ 437 Query: 97 DPCT-IQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTR 155 + I+ W E K + GLNLQ N+++ + + + +Q R+ Sbjct: 438 EGIDRIKGWLESKESKVLIATDVASEGLNLQ-SANVIIHYEIPLSIVRFEQRNGRVW--- 493 Query: 156 QRQAGFKRAVFVYYLIAQNTIDELVLQRLRTK 187 + R V++YY+ + +++ +L+ K Sbjct: 494 --RLKQTRPVYIYYISLKIPLEQALLENYYNK 523 >gi|238580466|ref|XP_002389294.1| hypothetical protein MPER_11594 [Moniliophthora perniciosa FA553] gi|215451409|gb|EEB90224.1| hypothetical protein MPER_11594 [Moniliophthora perniciosa FA553] Length = 97 Score = 58.8 bits (141), Expect = 5e-07, Method: Composition-based stats. Identities = 18/72 (25%), Positives = 31/72 (43%), Gaps = 5/72 (6%) Query: 129 GNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKS 188 N + WW Q I+R+ + G + V VY LI++NT++ VL K Sbjct: 1 ANNVYLMDPWWQEGIESQAIDRVN-----RIGQTKPVHVYQLISENTVESRVLDIQERKK 55 Query: 189 TIQDLLLNALKK 200 + + +K+ Sbjct: 56 NLIKQAFSGMKR 67 >gi|301775627|ref|XP_002923234.1| PREDICTED: LOW QUALITY PROTEIN: e1A-binding protein p400-like [Ailuropoda melanoleuca] Length = 2910 Score = 58.8 bits (141), Expect = 5e-07, Method: Composition-based stats. Identities = 22/147 (14%), Positives = 59/147 (40%), Gaps = 19/147 (12%) Query: 49 KEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQK----------AFPQGRTLDK 96 + K++AL ++++K + +++ L L+ + ++ Sbjct: 1723 VQFDSGKLEALAILLQKLKSEGRRVLILSQMVLMLDILEMFLNFHYLTYIRIDENANSEQ 1782 Query: 97 DPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTR 155 ++ +N + +I S G++L + +VF+ + + E Sbjct: 1783 RQELMRSFNRDRRIFCAILSTHSRATGVSLVE-ADAVVFYDNDLNPVMDAKAQEWCE--- 1838 Query: 156 QRQAGFKRAVFVYYLIAQNTIDELVLQ 182 + G ++ V +Y L++ N+I+E +L+ Sbjct: 1839 --RIGRRKDVHIYRLVSGNSIEEKLLK 1863 >gi|73994977|ref|XP_543352.2| PREDICTED: similar to E1A binding protein p400 (p400 kDa SWI2/SNF2-related protein) (Domino homolog) (hDomino) (CAG repeat protein 32) (Trinucleotide repeat-containing gene 12 protein) [Canis familiaris] Length = 3119 Score = 58.8 bits (141), Expect = 5e-07, Method: Composition-based stats. Identities = 22/147 (14%), Positives = 59/147 (40%), Gaps = 19/147 (12%) Query: 49 KEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQK----------AFPQGRTLDK 96 + K++AL ++++K + +++ L L+ + ++ Sbjct: 1884 VQFDSGKLEALAILLQKLKSEGRRVLILSQMVLMLDILEMFLNFHYLTYIRIDENANSEQ 1943 Query: 97 DPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTR 155 ++ +N + +I S G++L + +VF+ + + E Sbjct: 1944 RQELMRSFNRDRRIFCAILSTHSRATGVSLVE-ADAVVFYDNDLNPVMDAKAQEWCE--- 1999 Query: 156 QRQAGFKRAVFVYYLIAQNTIDELVLQ 182 + G ++ V +Y L++ N+I+E +L+ Sbjct: 2000 --RIGRRKDVHIYRLVSGNSIEEKLLK 2024 >gi|218191620|gb|EEC74047.1| hypothetical protein OsI_09041 [Oryza sativa Indica Group] Length = 952 Score = 58.8 bits (141), Expect = 5e-07, Method: Composition-based stats. Identities = 21/122 (17%), Positives = 45/122 (36%), Gaps = 17/122 (13%) Query: 45 EKHWKEVHDEKIKALEVIIEKAN---AAPIIVAYHFNSDLARLQK----------AFPQG 91 W E+ K+ L ++ + I++ ++ L + Sbjct: 581 GGMWVEL-SGKMHVLARLLGHLHLKTDDRIVLVSNYTQTLDLFAQLCRERRYPYIRLDGA 639 Query: 92 RTLDKDPCTIQEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIE 149 +++K + ++N+ + + G GLNL GGN L+ F W+ +Q+ + Sbjct: 640 TSINKRQKLVNQFNDPSRDEFVFLLSSKAGGCGLNL-VGGNRLILFDPDWNPANDKQVYQ 698 Query: 150 RI 151 R Sbjct: 699 RQ 700 >gi|326472754|gb|EGD96763.1| SNF2 family helicase/ATPase [Trichophyton tonsurans CBS 112818] Length = 1510 Score = 58.4 bits (140), Expect = 5e-07, Method: Composition-based stats. Identities = 26/119 (21%), Positives = 41/119 (34%), Gaps = 10/119 (8%) Query: 68 AAPIIVAYHFNSDLARLQKAF---PQGRTLDKDPCTIQEWNEG-KIPLLFAHPASCGHGL 123 A IV S L L F G + DP I+ + E H + GL Sbjct: 1250 GAKSIVFSQNKSFLVTLSHVFYWFKIGHSSIDDPSGIERFKEDHTTECFLLHAKAHASGL 1309 Query: 124 NLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQ 182 NL + + + Q I R+ + G + V+ + NT++E + Q Sbjct: 1310 NLVNATH-VFLCEPLINTAIELQAIARV-----HRIGQHQDTTVWMYLVANTVEESIYQ 1362 >gi|242051306|ref|XP_002463397.1| hypothetical protein SORBIDRAFT_02g043040 [Sorghum bicolor] gi|241926774|gb|EER99918.1| hypothetical protein SORBIDRAFT_02g043040 [Sorghum bicolor] Length = 1475 Score = 58.4 bits (140), Expect = 5e-07, Method: Composition-based stats. Identities = 27/154 (17%), Positives = 51/154 (33%), Gaps = 36/154 (23%) Query: 62 IIEKANAAPIIVAYHFNSDLARLQK----------AFPQGRTLDKDPCTIQEW------- 104 I A ++V +N L L+ GR K + + Sbjct: 1258 ITSTDGTAKVLVFSSWNDVLDVLEHSLAANNISYVRMKGGR---KSQAALSRFKGQVSNV 1314 Query: 105 ----------NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 N + +L +GLNL + ++ + Q I RI Sbjct: 1315 NVDEVKKTASNMKPVQVLLMLIQHGANGLNLLEAQH-VILVEPLLNPAAEAQAISRI--- 1370 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKS 188 + G ++ FV+ I + TI+E + + R+++ Sbjct: 1371 --HRVGQDKSTFVHRFIVKKTIEESIYKLNRSRA 1402 >gi|295672956|ref|XP_002797024.1| ATP-dependent DNA helicase [Paracoccidioides brasiliensis Pb01] gi|226282396|gb|EEH37962.1| ATP-dependent DNA helicase [Paracoccidioides brasiliensis Pb01] Length = 1480 Score = 58.4 bits (140), Expect = 5e-07, Method: Composition-based stats. Identities = 23/119 (19%), Positives = 41/119 (34%), Gaps = 10/119 (8%) Query: 68 AAPIIVAYHFNSDLARLQKAFPQGRT----LDKDPCTIQEWNEGKIPLLFAHPASCGHGL 123 A IV + L L +AF R +D T + + I H + GL Sbjct: 1236 GAKSIVFSQYKPFLGILARAFSHFRIGFSSIDYHDGTERFKRDPSIECFLLHAKAHSSGL 1295 Query: 124 NLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQ 182 NL + + + Q I R+ + G R V+ + ++++E + Sbjct: 1296 NLVNATH-VFLCEPLINTAIELQAIARV-----HRIGQHRETTVWMYLVSDSVEESIYD 1348 >gi|149186589|ref|ZP_01864901.1| putative helicase (Snf2 family) protein [Erythrobacter sp. SD-21] gi|148829816|gb|EDL48255.1| putative helicase (Snf2 family) protein [Erythrobacter sp. SD-21] Length = 992 Score = 58.4 bits (140), Expect = 5e-07, Method: Composition-based stats. Identities = 40/187 (21%), Positives = 68/187 (36%), Gaps = 23/187 (12%) Query: 13 CDLQGENIEAFNSASKTVKCLQLANGAVYYDEEK-HWKEVHDEKIKALEV----IIEKAN 67 L E+ + N + + GA+ + E D K + L I + Sbjct: 418 LSLDDEDDDNGNK-TLPGPLTE-TLGAICDNSRVLASLEASDTKFQRLVEWLRKIRQDHP 475 Query: 68 AAPIIVAYHFNSDLARLQKAFPQGRT--------LDKDPCTI-QEWNEGKIPLLFAHPAS 118 +I+ F + L + +D D TI + + + Sbjct: 476 DEKVIIFSSFRKTIDYLARRLEDAGFESIELHGGIDLDRQTIVNSFADAPAGTVLLTSEV 535 Query: 119 CGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA-VFVYYLIAQNTID 177 G GL+LQ+ IL + L W+ +Q I RI + G + + + LIA+ TI+ Sbjct: 536 GGEGLDLQF-CRILFNWDLPWNPMRVEQRIGRID-----RIGQQSPSIDIINLIAEKTIE 589 Query: 178 ELVLQRL 184 E V +RL Sbjct: 590 ERVYERL 596 >gi|323474068|gb|ADX84674.1| helicase domain protein [Sulfolobus islandicus REY15A] Length = 895 Score = 58.4 bits (140), Expect = 5e-07, Method: Composition-based stats. Identities = 28/177 (15%), Positives = 70/177 (39%), Gaps = 29/177 (16%) Query: 52 HDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQ-------------GRTLDK 96 +D +IKAL +++ +IV + + + T+++ Sbjct: 378 NDSRIKALTNLVKAHLNRGDKVIVFTEYKDTANYILDKLKRELNLSDKEIKKVTSETVNQ 437 Query: 97 DPCT-IQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTR 155 + I++W E K + GLNLQ N+++ + + + +Q R+ Sbjct: 438 EGIDQIKKWLESKESKVLVATDVASEGLNLQ-SANVIIHYEIPLSIVRFEQRNGRVW--- 493 Query: 156 QRQAGFKRAVFVYYLIAQNTIDELVLQRLRTK-------STIQDLLLNALKKETIHV 205 + + V++YY+ + +++ +L+ K + + +++AL + + V Sbjct: 494 --RLKQTKPVYIYYISLKIPLEQALLENYYNKLLSITKGTGSSEKVVDALIYQGVSV 548 >gi|264680182|ref|YP_003280091.1| hypothetical protein CtCNB1_4049 [Comamonas testosteroni CNB-2] gi|262210697|gb|ACY34795.1| hypothetical conserved protein [Comamonas testosteroni CNB-2] Length = 1177 Score = 58.4 bits (140), Expect = 5e-07, Method: Composition-based stats. Identities = 39/202 (19%), Positives = 76/202 (37%), Gaps = 21/202 (10%) Query: 4 YHKFQRELYCDLQGENIEAFNSASK--TVKCLQLANGAVYYDEEKHWKEVHDEKIKALEV 61 Y +F+ E+ A A + A V +++ W+E+ + E+ Sbjct: 439 YEQFEEEVVDQATAAQTIAELEAEVFTLEHLEKQARALVVSGQDRKWEELREILQNTPEM 498 Query: 62 IIEKANAAPIIVAYHFNSDL----ARLQKAFPQ--------GRTLDKDPCTIQE-WNEGK 108 + +I+ L R++ + G T +D +QE + + Sbjct: 499 LGPDGLQRKLIIFTEHRDTLNYLADRIRGLLGKREAVTMIHGSTHREDRRKVQEMFRTDR 558 Query: 109 IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVY 168 + + G G+NLQ N++V + L W+ +Q RI + G +A ++ Sbjct: 559 DTRVLLATDAAGEGVNLQN-ANLMVNYDLPWNPNRLEQRFGRI-----HRIGQTQACHLW 612 Query: 169 YLIAQNTIDELVLQRLRTKSTI 190 ++A T + V Q+L K I Sbjct: 613 NMVAAETREGNVFQKLFEKLEI 634 >gi|134084700|emb|CAK47319.1| unnamed protein product [Aspergillus niger] Length = 1485 Score = 58.4 bits (140), Expect = 5e-07, Method: Composition-based stats. Identities = 29/159 (18%), Positives = 54/159 (33%), Gaps = 16/159 (10%) Query: 54 EKIKALEVII----EKANAAPIIVAYHFNSDLARLQKA---FPQGRTLDKDPCTIQEWN- 105 KI L I E A +V + + L L A F G + IQ + Sbjct: 1240 TKIDTLARHILWLREHDPGAKSVVFSQYKNFLEILANALSRFKIGFSSVDAKDGIQNFKS 1299 Query: 106 EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 + + H + GLNL + + + Q I R+ + G R Sbjct: 1300 DPAVECFLLHAKAHSSGLNLVNATH-VFLCEPLINTAIELQAIARV-----HRIGQHRPT 1353 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIH 204 V+ + +T+++ + ++ ++ KK+ H Sbjct: 1354 TVWMYLVSDTVEQSIYDLSVSRRLAH--IVQKEKKQEKH 1390 >gi|303288149|ref|XP_003063363.1| SNF2 super family [Micromonas pusilla CCMP1545] gi|226455195|gb|EEH52499.1| SNF2 super family [Micromonas pusilla CCMP1545] Length = 2005 Score = 58.4 bits (140), Expect = 5e-07, Method: Composition-based stats. Identities = 22/129 (17%), Positives = 47/129 (36%), Gaps = 16/129 (12%) Query: 68 AAPIIVAYHFNS---------DLARLQKAFPQGRTLDKDPCTIQEWNEGKIP------LL 112 +++ + D A ++ +G + + E+ + K+ L+ Sbjct: 1864 DERVLIFIQYPDLMKQVSDVLDDANIKYLKLKGSV-HQQCAALDEFQKEKLRPGDARVLM 1922 Query: 113 FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIA 172 G NL + + L + + E + R R+ G + V V+ LIA Sbjct: 1923 LLSRDESASGANLTTANHAIFVHPLETNTQYEYDASETQAIGRIRRYGQTKLVHVHRLIA 1982 Query: 173 QNTIDELVL 181 ++TI+E + Sbjct: 1983 KDTIEEKIY 1991 >gi|126727279|ref|ZP_01743115.1| helicase [Rhodobacterales bacterium HTCC2150] gi|126703488|gb|EBA02585.1| helicase [Rhodobacterales bacterium HTCC2150] Length = 963 Score = 58.4 bits (140), Expect = 5e-07, Method: Composition-based stats. Identities = 23/110 (20%), Positives = 45/110 (40%), Gaps = 8/110 (7%) Query: 87 AFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 RT D ++ + ++ S G+NLQ+ ++L+ F L W+ + +Q Sbjct: 491 RISGSRTADMKAALVEAFKSSNKSIM-ISTESGAEGINLQF-CSVLINFDLPWNPQRIEQ 548 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIA-QNTIDELVLQRLRTKSTIQDLLL 195 I R + G K V V ++ +N + + + L K + D + Sbjct: 549 RIGRC-----HRYGQKIDVTVVNMLNRKNHTEARIFELLNEKFKLFDGVF 593 >gi|326484972|gb|EGE08982.1| SNF2 family helicase/ATPase [Trichophyton equinum CBS 127.97] Length = 1517 Score = 58.4 bits (140), Expect = 6e-07, Method: Composition-based stats. Identities = 26/119 (21%), Positives = 41/119 (34%), Gaps = 10/119 (8%) Query: 68 AAPIIVAYHFNSDLARLQKAF---PQGRTLDKDPCTIQEWNEG-KIPLLFAHPASCGHGL 123 A IV S L L F G + DP I+ + E H + GL Sbjct: 1257 GAKSIVFSQNKSFLVTLSHVFYWFKIGHSSIDDPSGIERFKEDHTTECFLLHAKAHASGL 1316 Query: 124 NLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQ 182 NL + + + Q I R+ + G + V+ + NT++E + Q Sbjct: 1317 NLVNATH-VFLCEPLINTAIELQAIARV-----HRIGQHQDTTVWMYLVANTVEESIYQ 1369 >gi|302773700|ref|XP_002970267.1| hypothetical protein SELMODRAFT_441121 [Selaginella moellendorffii] gi|300161783|gb|EFJ28397.1| hypothetical protein SELMODRAFT_441121 [Selaginella moellendorffii] Length = 1029 Score = 58.4 bits (140), Expect = 6e-07, Method: Composition-based stats. Identities = 29/161 (18%), Positives = 56/161 (34%), Gaps = 26/161 (16%) Query: 53 DEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTI----------- 101 + L + + AN ++V F + L + R +D + Sbjct: 821 TAFVMKLIELCQCANEK-VLVFGEFLAPFHLLLRMLELERGWSRDKEVVFLHGALVTEER 879 Query: 102 ----QEWNE--GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTR 155 +N + + A +C G+ L G + +V W+ + Q I R Sbjct: 880 HELMDRFNAEGSEARVCLASIRACAEGITL-VGASRVVLLHPVWNPAQTNQAISR----- 933 Query: 156 QRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + G KR VFVY L+ + ++ + R + K + + Sbjct: 934 AFRLGQKRKVFVYRLVTE--VETVKNSRTKWKDFCSEAIFE 972 >gi|71029760|ref|XP_764523.1| DNA helicase [Theileria parva strain Muguga] gi|68351477|gb|EAN32240.1| DNA helicase, putative [Theileria parva] Length = 941 Score = 58.4 bits (140), Expect = 6e-07, Method: Composition-based stats. Identities = 37/203 (18%), Positives = 67/203 (33%), Gaps = 51/203 (25%) Query: 27 SKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQK 86 S K QL + K +E I+E N I+ H + ++ Sbjct: 731 SLMAKLFQLTG-----------ESKTKGVCKYIEEILENQN--KFIIFAHHMFMMDAIED 777 Query: 87 ----------AFPQGRTLDKDPCTIQEWN--------EGKIP-------------LLFAH 115 ++ + + EGK+ + Sbjct: 778 TLRSKKVGYIRIDGSTKMNDRAKLVNLFQNTNESTKHEGKVDKVEDEDSPDYTVRVALLS 837 Query: 116 PASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFK-RAVFVYYLIAQN 174 SCG GLNL + ++F L+W Q +R+ + G K + + YLIAQN Sbjct: 838 LTSCGVGLNLT-SSSTVIFAELYWVPGVLLQAEDRV-----HRIGTKFNKININYLIAQN 891 Query: 175 TIDELVLQRLRTKSTIQDLLLNA 197 +++E++ + + K L+ Sbjct: 892 SVEEVMWKVINKKYKTVTSTLDG 914 >gi|296220828|ref|XP_002756502.1| PREDICTED: lymphoid-specific helicase isoform 4 [Callithrix jacchus] Length = 808 Score = 58.4 bits (140), Expect = 6e-07, Method: Composition-based stats. Identities = 14/56 (25%), Positives = 28/56 (50%), Gaps = 5/56 (8%) Query: 140 DLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 + + Q +R + G + V VY L+ NTID+ +++R K ++ L++ Sbjct: 667 NPQSDLQAQDRC-----HRIGQTKPVVVYRLVTANTIDQKIVERAAAKRKLEKLII 717 >gi|261403402|ref|YP_003247626.1| helicase domain protein [Methanocaldococcus vulcanius M7] gi|261370395|gb|ACX73144.1| helicase domain protein [Methanocaldococcus vulcanius M7] Length = 994 Score = 58.4 bits (140), Expect = 6e-07, Method: Composition-based stats. Identities = 37/162 (22%), Positives = 61/162 (37%), Gaps = 30/162 (18%) Query: 47 HWKEVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQKAFPQ-------------- 90 + D KI AL II + N I+V + L LQ+ P+ Sbjct: 379 NIIVKKDSKIDALAKIIAEHIRNNEKIVVFTEYVDTLKYLQENLPKYLDNYGINIDTNEI 438 Query: 91 ----GRTLDKDPCTIQEWNE-GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQ 145 G + +++ + GKI GLNLQ ++L+ + W + + Sbjct: 439 LTLSGENKNLLENINKKFEDCGKI---LLATDVASEGLNLQI-ASVLINYDSPWSPIKLE 494 Query: 146 QMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTK 187 Q I R+ + G ++ V VY + N +D +L L K Sbjct: 495 QRIGRVW-----RLGQEKDVSVYNIFLSNRMDLELLNNLYKK 531 >gi|327304455|ref|XP_003236919.1| SNF2 family helicase/ATPase [Trichophyton rubrum CBS 118892] gi|326459917|gb|EGD85370.1| SNF2 family helicase/ATPase [Trichophyton rubrum CBS 118892] Length = 1515 Score = 58.4 bits (140), Expect = 6e-07, Method: Composition-based stats. Identities = 26/119 (21%), Positives = 41/119 (34%), Gaps = 10/119 (8%) Query: 68 AAPIIVAYHFNSDLARLQKAF---PQGRTLDKDPCTIQEWNEG-KIPLLFAHPASCGHGL 123 A IV S L L F G + DP I+ + E H + GL Sbjct: 1257 GAKSIVFSQNKSFLVTLSHVFYWFKIGHSSIDDPSGIERFKEDHTTECFLLHAKAHASGL 1316 Query: 124 NLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQ 182 NL + + + Q I R+ + G + V+ + NT++E + Q Sbjct: 1317 NLVNATH-VFLCEPLINTAIELQAIARV-----HRIGQHQDTTVWMYLVANTVEESIYQ 1369 >gi|324510004|gb|ADY44188.1| Chromodomain-helicase-DNA-binding protein 1-like protein [Ascaris suum] Length = 456 Score = 58.4 bits (140), Expect = 6e-07, Method: Composition-based stats. Identities = 20/133 (15%), Positives = 40/133 (30%), Gaps = 20/133 (15%) Query: 45 EKHWKEVHDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAFPQGR---------- 92 E K+ LE I+ + + +++ L +Q F R Sbjct: 314 EGEHLATSSGKMMLLERILGFLRKHKHRVLLFSQMTRMLDIVQDYFNYRRWSFERLDGKL 373 Query: 93 TLDKDPCTIQEWNEGKIPLL--FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 D I + + + + G GL L G + ++F ++ + Q R Sbjct: 374 KADMRFTAIDNFQKSDSDVFCFLLSTRAGGLGLTLT-GADTVIFIDSDFNPQNDIQAAAR 432 Query: 151 IGVTRQRQAGFKR 163 + G + Sbjct: 433 C-----HRIGQTK 440 >gi|296391289|ref|ZP_06880764.1| putative DNA helicase [Pseudomonas aeruginosa PAb1] Length = 84 Score = 58.4 bits (140), Expect = 6e-07, Method: Composition-based stats. Identities = 23/80 (28%), Positives = 34/80 (42%), Gaps = 6/80 (7%) Query: 117 ASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTI 176 A+ G G NL N + F L W + +Q +R + G R V V + + TI Sbjct: 2 AAAGTGNNLT-AANYVFFLGLPWTPGQQEQAEDR-----AYRNGQLRMVVVKIPLVEATI 55 Query: 177 DELVLQRLRTKSTIQDLLLN 196 DE + Q L K + L+ Sbjct: 56 DEQLWQLLNAKRQVAQDLIE 75 >gi|302416787|ref|XP_003006225.1| E3 ubiquitin-protein ligase SHPRH [Verticillium albo-atrum VaMs.102] gi|261355641|gb|EEY18069.1| E3 ubiquitin-protein ligase SHPRH [Verticillium albo-atrum VaMs.102] Length = 1401 Score = 58.4 bits (140), Expect = 6e-07, Method: Composition-based stats. Identities = 24/132 (18%), Positives = 45/132 (34%), Gaps = 11/132 (8%) Query: 64 EKANAAPIIVAYHFNSDLARLQKAFPQGRT----LDKDPCTIQEWNEGKIPLLFAHPASC 119 E A IV + L + A + R +DK + + + H + Sbjct: 1174 ESDPGAKSIVFSQYRDFLQVIGSALSRSRIGYTSIDKPNGVQRFKEDAGLECFLLHGRAQ 1233 Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 GLNL + + + Q I R+ + G + V+ + + T++E Sbjct: 1234 SSGLNLVNASH-VFLCEPLLNTAIELQAIARVD-----RIGQQHETTVWLYLIEGTVEES 1287 Query: 180 VLQRLRTKSTIQ 191 + L K +Q Sbjct: 1288 IYN-LSVKRRLQ 1298 >gi|169615006|ref|XP_001800919.1| hypothetical protein SNOG_10656 [Phaeosphaeria nodorum SN15] gi|111060930|gb|EAT82050.1| hypothetical protein SNOG_10656 [Phaeosphaeria nodorum SN15] Length = 682 Score = 58.4 bits (140), Expect = 6e-07, Method: Composition-based stats. Identities = 30/133 (22%), Positives = 52/133 (39%), Gaps = 11/133 (8%) Query: 72 IVAYHFNSDLARLQKAFPQGRTL-DKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGG 129 +V F + ++ GR ++ P E++ G ++ G GLN+ Sbjct: 546 VVQIAFEAMYDPIECLRYDGREFAERRPAIQAEFDKSGGHKVMLMSRGVGGLGLNI-PSA 604 Query: 130 NILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVL--QRLRTK 187 N+++ WW E Q + R + G KRAV L A N+ E + + K Sbjct: 605 NVIIQCCPWWKREWEVQAMGR-----AYREGQKRAVTYIKLTATNSHAE-IYKTKTRDRK 658 Query: 188 STIQDLLLNALKK 200 T ++ AL + Sbjct: 659 HTYNSRVVKALTR 671 >gi|297301538|ref|XP_001094310.2| PREDICTED: lymphoid-specific helicase isoform 3 [Macaca mulatta] Length = 808 Score = 58.4 bits (140), Expect = 6e-07, Method: Composition-based stats. Identities = 23/150 (15%), Positives = 55/150 (36%), Gaps = 30/150 (20%) Query: 50 EVHDEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEG 107 + K L+ ++ + +++ S L L D C ++++N Sbjct: 594 VTNSGKFLILDRMLPELKKRGHKVLLFSQMTSMLDILM-----------DYCHLRDFNFS 642 Query: 108 KIPLLFAHPASCG--HGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 ++ ++ H N+ + + Q +R + G + V Sbjct: 643 RLDGSMSYSEREKNMHSFNM----------DPEVNPQSDLQAQDRC-----HRIGQTKPV 687 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 VY L+ NT+D+ +++R K ++ L++ Sbjct: 688 VVYRLVTANTVDQKIVERAAAKRKLEKLII 717 >gi|295836817|ref|ZP_06823750.1| conserved hypothetical protein [Streptomyces sp. SPB74] gi|295826220|gb|EDY44436.2| conserved hypothetical protein [Streptomyces sp. SPB74] Length = 546 Score = 58.4 bits (140), Expect = 6e-07, Method: Composition-based stats. Identities = 29/136 (21%), Positives = 56/136 (41%), Gaps = 10/136 (7%) Query: 68 AAPIIVAYHFNSDLARLQKAFPQ-------GRTLDKDPCTIQEWNEGKIPLLFAHPASCG 120 ++ F L L++ + G T D++ + + +L ++PA+ G Sbjct: 373 GKKTLIWTTFVRSLTTLERLLAKFGPASVYGGTPDREEQLRRFREDPSCMVLISNPATLG 432 Query: 121 HGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELV 180 G++L + V+ + Q ++RI G + +V V L A+ T+DE+V Sbjct: 433 EGISLHQSVHDAVYVDRDFMAGRFLQSLDRIHRLGL-APGTETSVTV--LAARGTVDEVV 489 Query: 181 LQRLRTKSTIQDLLLN 196 RL K +L+ Sbjct: 490 AARLDRKLEFMGAILD 505 >gi|254773730|ref|ZP_05215246.1| helicase domain-containing protein [Mycobacterium avium subsp. avium ATCC 25291] Length = 1136 Score = 58.4 bits (140), Expect = 6e-07, Method: Composition-based stats. Identities = 37/170 (21%), Positives = 66/170 (38%), Gaps = 25/170 (14%) Query: 27 SKTVKCLQLANGAVYYDEEKHWKEV-----HDEKIKALEVIIEKANAAPIIVAYHFNSDL 81 ++ K LQ + A+ D++ ++ H + + L V I P Sbjct: 474 TELSKILQ--DNALTTDKDGVPRKFIIFTEHRDTLDYLAVRIRSLLGKP----------- 520 Query: 82 ARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDL 141 +Q R L++ T + +L A + G GLNLQ +++V + L W+ Sbjct: 521 DAVQAIHGGVRRLERRVITEEFTKNRGCQILLA-TDAAGEGLNLQ-AAHLMVNYDLPWNP 578 Query: 142 EEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQ 191 +Q RI + G + ++ L+A NT + V +L K Q Sbjct: 579 NRIEQRFGRI-----HRIGQEEVCRLWNLVASNTREGDVFVQLLLKVEEQ 623 >gi|310831392|ref|YP_003970035.1| putative superfamily II helicase [Cafeteria roenbergensis virus BV-PW1] gi|309386576|gb|ADO67436.1| putative superfamily II helicase [Cafeteria roenbergensis virus BV-PW1] Length = 816 Score = 58.4 bits (140), Expect = 6e-07, Method: Composition-based stats. Identities = 21/132 (15%), Positives = 50/132 (37%), Gaps = 15/132 (11%) Query: 63 IEKANAAPIIVAYHFNSDLARLQ---------KAFPQGRTLDKDPCTIQEWN----EGKI 109 I II+ ++ L + +F +G ++ I+ + Sbjct: 682 ITSNPENNIIIFSQYDFMLKLISVSLSQNGVSNSFVKGNVFQRN-KAIETFRGLRMNQSS 740 Query: 110 PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYY 169 ++ + G +L N ++F ++ IE + R + G K+ V+++ Sbjct: 741 KVIMLSLKNAASGTHLVE-ANHIIFVDPVDSTKDSVIDIENQAIARAFRIGQKKKVYIHR 799 Query: 170 LIAQNTIDELVL 181 L+ ++TI+E + Sbjct: 800 LLIKDTIEENIY 811 >gi|253755095|ref|YP_003028235.1| hypothetical protein SSUBM407_0473 [Streptococcus suis BM407] gi|251817559|emb|CAZ55306.1| hypothetical protein SSUBM407_0473 [Streptococcus suis BM407] Length = 2281 Score = 58.4 bits (140), Expect = 6e-07, Method: Composition-based stats. Identities = 22/98 (22%), Positives = 39/98 (39%), Gaps = 4/98 (4%) Query: 90 QGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIE 149 T +K ++ N G++ +L A G GLN+Q + + W + Q Sbjct: 1912 DANTDEKKNSLSRKVNSGEVRILMASTEKGGTGLNVQSRMKAVHHLDVPWRPSDIVQRNG 1971 Query: 150 RIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTK 187 R+ RQ + V +Y+ I + + D + Q K Sbjct: 1972 RLI----RQGNMHQEVDIYHYITKGSFDNYLWQTQENK 2005 >gi|302660947|ref|XP_003022147.1| hypothetical protein TRV_03750 [Trichophyton verrucosum HKI 0517] gi|291186078|gb|EFE41529.1| hypothetical protein TRV_03750 [Trichophyton verrucosum HKI 0517] Length = 333 Score = 58.4 bits (140), Expect = 6e-07, Method: Composition-based stats. Identities = 26/119 (21%), Positives = 41/119 (34%), Gaps = 10/119 (8%) Query: 68 AAPIIVAYHFNSDLARLQKAF---PQGRTLDKDPCTIQEWNEG-KIPLLFAHPASCGHGL 123 A IV S L L F G + DP I+ + E H + GL Sbjct: 75 GAKSIVFSQNKSFLVTLSHVFYWFKIGHSSIDDPSGIERFKEDHTTECFLLHAKAHASGL 134 Query: 124 NLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQ 182 NL + + + Q I R+ + G + V+ + NT++E + Q Sbjct: 135 NLVNATH-VFLCEPLINTAIELQAIARV-----HRIGQHQDTTVWMYLVANTVEESIYQ 187 >gi|302501520|ref|XP_003012752.1| hypothetical protein ARB_01003 [Arthroderma benhamiae CBS 112371] gi|291176312|gb|EFE32112.1| hypothetical protein ARB_01003 [Arthroderma benhamiae CBS 112371] Length = 333 Score = 58.4 bits (140), Expect = 6e-07, Method: Composition-based stats. Identities = 26/119 (21%), Positives = 41/119 (34%), Gaps = 10/119 (8%) Query: 68 AAPIIVAYHFNSDLARLQKAF---PQGRTLDKDPCTIQEWNEG-KIPLLFAHPASCGHGL 123 A IV S L L F G + DP I+ + E H + GL Sbjct: 75 GAKSIVFSQNKSFLVTLSHVFYWFKIGHSSIDDPSGIERFKEDHTTECFLLHAKAHASGL 134 Query: 124 NLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQ 182 NL + + + Q I R+ + G + V+ + NT++E + Q Sbjct: 135 NLVNATH-VFLCEPLINTAIELQAIARV-----HRIGQHQDTTVWMYLVANTVEESIYQ 187 >gi|313889303|ref|ZP_07822954.1| helicase C-terminal domain protein [Streptococcus pseudoporcinus SPIN 20026] gi|313122351|gb|EFR45439.1| helicase C-terminal domain protein [Streptococcus pseudoporcinus SPIN 20026] Length = 1555 Score = 58.4 bits (140), Expect = 6e-07, Method: Composition-based stats. Identities = 22/98 (22%), Positives = 39/98 (39%), Gaps = 4/98 (4%) Query: 90 QGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIE 149 T +K ++ N G++ +L A G GLN+Q + + W + Q Sbjct: 1186 DANTDEKKNSLSRKVNSGEVRILMASTEKGGTGLNVQSRMKAVHHLDVPWRPSDIVQRNG 1245 Query: 150 RIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTK 187 R+ RQ + V +Y+ I + + D + Q K Sbjct: 1246 RLI----RQGNMHQEVDIYHYITKGSFDNYLWQTQENK 1279 >gi|327283199|ref|XP_003226329.1| PREDICTED: e1A-binding protein p400-like [Anolis carolinensis] Length = 3122 Score = 58.4 bits (140), Expect = 6e-07, Method: Composition-based stats. Identities = 26/171 (15%), Positives = 64/171 (37%), Gaps = 19/171 (11%) Query: 25 SASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLA 82 + + Q + + + K++AL V+++K + +++ L Sbjct: 1832 AGPFLHQLQQFITPQLLQFPDLRLVQYDAGKLEALAVLLQKLKSEGRRVLILSQMILMLD 1891 Query: 83 RLQK----AFPQGRTLDK------DPCTIQEWNEGK-IPLLFAHPASCGHGLNLQYGGNI 131 L+ F +D+ +++ +N K I S G+NL + Sbjct: 1892 ILEHFLNFHFLTYVRIDECANQEERQESMKTFNRDKRIFCAILSSHSRSTGVNLVE-ADT 1950 Query: 132 LVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQ 182 +VF+ + + E + G + + +Y L++ N+++E +L+ Sbjct: 1951 VVFYDNDLNPVMDAKAQEWCD-----RIGRCKDIHIYRLVSGNSVEEKLLK 1996 >gi|324500290|gb|ADY40142.1| E3 ubiquitin-protein ligase SHPRH [Ascaris suum] Length = 1245 Score = 58.4 bits (140), Expect = 6e-07, Method: Composition-based stats. Identities = 32/154 (20%), Positives = 55/154 (35%), Gaps = 17/154 (11%) Query: 48 WKEVHDEKIKA----LEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRT------LDKD 97 K K+ A L I E+ A +V S + + + + K Sbjct: 1060 VKGDASVKLDAVIRRLLSIHERDPWAKTLVFTSIPSIIPVISGLLQENNIPYRNYSVGKR 1119 Query: 98 PCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 T+ E+ + KI +L GLNL NI +F D + Q I RI Sbjct: 1120 QVTLAEFRLDPKIQVLVMPINQGARGLNLTVANNI-IFVEPQLDASQLAQAIGRID---- 1174 Query: 157 RQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 + G R + +++ + +I+E + R+ Sbjct: 1175 -RIGQTRRMMIHHFVVYGSIEEHIHHRITDPQNT 1207 >gi|296134095|ref|YP_003641342.1| helicase domain protein [Thermincola sp. JR] gi|296032673|gb|ADG83441.1| helicase domain protein [Thermincola potens JR] Length = 469 Score = 58.4 bits (140), Expect = 6e-07, Method: Composition-based stats. Identities = 31/152 (20%), Positives = 61/152 (40%), Gaps = 19/152 (12%) Query: 55 KIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRT--------LDKDPCTIQEW-- 104 K+ L+ I++K I+V + + + + L ++ +W Sbjct: 300 KLYHLQAILQKHPGK-ILVFTEYMQTQFFIGRWLNELGINFIHFNGKLKRNQKEYTKWLF 358 Query: 105 NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFK-R 163 ++ S GLN Q+ N++V F L W+ + +Q I RI + G Sbjct: 359 QNKDYRVMIC-TDSGSQGLNFQF-CNVIVNFDLPWNPMKVEQRIGRID-----RLGQTAD 411 Query: 164 AVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 V+VY + Q+T++E + L +K + + Sbjct: 412 EVYVYNFVLQDTVEEKIFHILSSKIALFKECI 443 >gi|260789510|ref|XP_002589789.1| hypothetical protein BRAFLDRAFT_90470 [Branchiostoma floridae] gi|229274972|gb|EEN45800.1| hypothetical protein BRAFLDRAFT_90470 [Branchiostoma floridae] Length = 987 Score = 58.4 bits (140), Expect = 6e-07, Method: Composition-based stats. Identities = 16/116 (13%), Positives = 40/116 (34%), Gaps = 19/116 (16%) Query: 59 LEVIIEKANAAPIIVAYHFNSDLARL-----QKAFPQGRTLDKDP-----CTIQEWNEG- 107 L + E+ +++ L + ++ + R + P I ++N Sbjct: 867 LPEMAER--GDRVLLFSQLTMMLDIVEPYLKRRKYKYVRLDGQTPVTERLQLIDQYNNNT 924 Query: 108 KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKR 163 I + + G G+NL N ++ + ++ +Q +R + G + Sbjct: 925 DIFIFLLSTRAGGLGINLT-SANTVILHDIDFNPYNDKQAEDRC-----HRVGQTK 974 >gi|157419748|gb|ABV55437.1| SNF2-related helicase [Streptococcus dysgalactiae subsp. equisimilis] Length = 2278 Score = 58.4 bits (140), Expect = 6e-07, Method: Composition-based stats. Identities = 22/98 (22%), Positives = 39/98 (39%), Gaps = 4/98 (4%) Query: 90 QGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIE 149 T +K ++ N G++ +L A G GLN+Q + + W + Q Sbjct: 1909 DANTDEKKNSLSRKVNSGEVRILMASTEKGGTGLNVQSRMKAVHHLDVPWRPSDIVQRNG 1968 Query: 150 RIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTK 187 R+ RQ + V +Y+ I + + D + Q K Sbjct: 1969 RLI----RQGNMHQEVDIYHYITKGSFDNYLWQTQENK 2002 >gi|290976679|ref|XP_002671067.1| DEXH-box helicase [Naegleria gruberi] gi|284084632|gb|EFC38323.1| DEXH-box helicase [Naegleria gruberi] Length = 1385 Score = 58.4 bits (140), Expect = 6e-07, Method: Composition-based stats. Identities = 18/97 (18%), Positives = 41/97 (42%), Gaps = 7/97 (7%) Query: 95 DKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGV 153 ++ + + G + + G G + + ++F L+W + +Q +R+ Sbjct: 717 NRRQNLVNTFRTNGHCRVAILSIKAAGVGYTMTP-CSTVLFAELYWTPSDLRQAEDRV-- 773 Query: 154 TRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 + G AV + YL+ ++T DE + L+ K + Sbjct: 774 ---HRMGQTNAVSIKYLLGKDTFDEYLWPLLQKKLEV 807 >gi|146318616|ref|YP_001198328.1| SNF2 family protein [Streptococcus suis 05ZYH33] gi|145689422|gb|ABP89928.1| SNF2 family protein [Streptococcus suis 05ZYH33] Length = 2274 Score = 58.4 bits (140), Expect = 6e-07, Method: Composition-based stats. Identities = 22/98 (22%), Positives = 39/98 (39%), Gaps = 4/98 (4%) Query: 90 QGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIE 149 T +K ++ N G++ +L A G GLN+Q + + W + Q Sbjct: 1905 DANTDEKKNSLSRKVNSGEVRILMASTEKGGTGLNVQSRMKAVHHLDVPWRPSDIVQRNG 1964 Query: 150 RIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTK 187 R+ RQ + V +Y+ I + + D + Q K Sbjct: 1965 RLI----RQGNMHQEVDIYHYITKGSFDNYLWQTQENK 1998 >gi|323127133|gb|ADX24430.1| SNF2 family protein [Streptococcus dysgalactiae subsp. equisimilis ATCC 12394] Length = 2274 Score = 58.4 bits (140), Expect = 6e-07, Method: Composition-based stats. Identities = 22/98 (22%), Positives = 39/98 (39%), Gaps = 4/98 (4%) Query: 90 QGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIE 149 T +K ++ N G++ +L A G GLN+Q + + W + Q Sbjct: 1905 DANTDEKKNSLSRKVNSGEVRILMASTEKGGTGLNVQSRMKAVHHLDVPWRPSDIVQRNG 1964 Query: 150 RIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTK 187 R+ RQ + V +Y+ I + + D + Q K Sbjct: 1965 RLI----RQGNMHQEVDIYHYITKGSFDNYLWQTQENK 1998 >gi|301115138|ref|XP_002905298.1| conserved hypothetical protein [Phytophthora infestans T30-4] gi|262110087|gb|EEY68139.1| conserved hypothetical protein [Phytophthora infestans T30-4] Length = 855 Score = 58.4 bits (140), Expect = 6e-07, Method: Composition-based stats. Identities = 18/115 (15%), Positives = 46/115 (40%), Gaps = 10/115 (8%) Query: 95 DKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMI--ERIG 152 + + ++ G I +L + + G+NLQ +++ + + Q E+ Sbjct: 623 ETKSAHVSSFHSGDIQVLILNSLTSASGINLQVASHLIFLDPVGYSP---MQANTLEQQA 679 Query: 153 VTRQRQAGFKRA-VFVYYLIAQNTID----ELVLQRLRTKSTIQDLLLNALKKET 202 + R + G V V LIA++T++ + + + + D + +++ Sbjct: 680 IGRVLRMGQTNDLVTVVRLIAEDTVEATLYDDIHEATQKTIAADDSFFDGEREDA 734 >gi|253751738|ref|YP_003024879.1| hypothetical protein SSUSC84_0870 [Streptococcus suis SC84] gi|251816027|emb|CAZ51647.1| hypothetical protein SSUSC84_0870 [Streptococcus suis SC84] Length = 2274 Score = 58.4 bits (140), Expect = 6e-07, Method: Composition-based stats. Identities = 22/98 (22%), Positives = 39/98 (39%), Gaps = 4/98 (4%) Query: 90 QGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIE 149 T +K ++ N G++ +L A G GLN+Q + + W + Q Sbjct: 1905 DANTDEKKNSLSRKVNSGEVRILMASTEKGGTGLNVQSRMKAVHHLDVPWRPSDIVQRNG 1964 Query: 150 RIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTK 187 R+ RQ + V +Y+ I + + D + Q K Sbjct: 1965 RLI----RQGNMHQEVDIYHYITKGSFDNYLWQTQENK 1998 >gi|76797967|ref|ZP_00780227.1| SNF2 family protein [Streptococcus agalactiae 18RS21] gi|76586691|gb|EAO63189.1| SNF2 family protein [Streptococcus agalactiae 18RS21] Length = 2271 Score = 58.4 bits (140), Expect = 6e-07, Method: Composition-based stats. Identities = 22/98 (22%), Positives = 39/98 (39%), Gaps = 4/98 (4%) Query: 90 QGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIE 149 T +K ++ N G++ +L A G GLN+Q + + W + Q Sbjct: 1905 DANTDEKKNSLSRKVNSGEVRILMASTEKGGTGLNVQSRMKAVHHLDVPWRPSDIVQRNG 1964 Query: 150 RIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTK 187 R+ RQ + V +Y+ I + + D + Q K Sbjct: 1965 RLI----RQGNMHQEVDIYHYITKGSFDNYLWQTQENK 1998 >gi|223932202|ref|ZP_03624206.1| SNF2-related protein [Streptococcus suis 89/1591] gi|223899183|gb|EEF65540.1| SNF2-related protein [Streptococcus suis 89/1591] Length = 2274 Score = 58.0 bits (139), Expect = 6e-07, Method: Composition-based stats. Identities = 22/98 (22%), Positives = 39/98 (39%), Gaps = 4/98 (4%) Query: 90 QGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIE 149 T +K ++ N G++ +L A G GLN+Q + + W + Q Sbjct: 1905 DANTDEKKNSLSRKVNSGEVRILMASTEKGGTGLNVQSRMKAVHHLDVPWRPSDIVQRNG 1964 Query: 150 RIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTK 187 R+ RQ + V +Y+ I + + D + Q K Sbjct: 1965 RLI----RQGNMHQEVDIYHYITKGSFDNYLWQTQENK 1998 >gi|225427685|ref|XP_002273814.1| PREDICTED: hypothetical protein [Vitis vinifera] Length = 903 Score = 58.0 bits (139), Expect = 7e-07, Method: Composition-based stats. Identities = 21/130 (16%), Positives = 51/130 (39%), Gaps = 22/130 (16%) Query: 65 KANAAPIIVAYHFNSDLARLQKAFPQGR---------------TLDKDPCTIQEWN-EGK 108 +++ ++V + L L+K + + + ++ +++ +N Sbjct: 722 QSSGEKLLVFSQYLLPLRFLEKLTMKVKGWSPGKEIFAISGESSSEQREWSMERFNTSPD 781 Query: 109 IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVY 168 + F +CG G++L +L+ + R + R + G K+ V VY Sbjct: 782 ARVFFGSIKACGEGISLVGASRVLILD------VHLNPSVTRQAIGRAFRPGQKKKVHVY 835 Query: 169 YLIAQNTIDE 178 L+A ++ +E Sbjct: 836 KLVAADSPEE 845 >gi|160881051|ref|YP_001560019.1| SNF2-related protein [Clostridium phytofermentans ISDg] gi|160429717|gb|ABX43280.1| SNF2-related protein [Clostridium phytofermentans ISDg] Length = 660 Score = 58.0 bits (139), Expect = 7e-07, Method: Composition-based stats. Identities = 32/257 (12%), Positives = 83/257 (32%), Gaps = 63/257 (24%) Query: 2 KQYHKFQRELYCDLQGENIEAFN-------SASKTVKCLQLANGAV-------------- 40 + Y +++ + + N A+K ++ +Q A Sbjct: 376 RIYDLIEKKYIESIIENKEDDLNDKFKKQLVAAKMIRLMQAATNPTLLRMPLKEFLYDED 435 Query: 41 -------YYDEEKHWKEVHDEK----------IKALEVIIEKANAAPII--VAYHFNSDL 81 +D+ K++ D K +K L I +I DL Sbjct: 436 LSIDLLKNFDDTDLLKQILDYKDNEIPAKFIEVKKLVDSIISDGGKVVIWASFVKNIHDL 495 Query: 82 A-RLQKAFPQGRTLD-----------------KDPCTIQEWN--EGKIPLLFAHPASCGH 121 L+ + + L ++++ + ++ A+P + Sbjct: 496 KLYLENNGIKCQELYGAIPVEQEDMNSDNDTLTREKIVRDFQKENSEFKVIIANPFAVAE 555 Query: 122 GLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVL 181 ++L + ++ ++ + Q +RI + YY++++++IDE++ Sbjct: 556 SISLHKSCHNAIYLERTFNAAHYMQSKDRIHRYGLKAGIETN---YYYILSKDSIDEIIH 612 Query: 182 QRLRTKSTIQDLLLNAL 198 +RL K ++ ++ Sbjct: 613 ERLNLKERRMTEIMESM 629 >gi|296111469|ref|YP_003621851.1| helicase, SNF2 family [Leuconostoc kimchii IMSNU 11154] gi|295833001|gb|ADG40882.1| helicase, SNF2 family [Leuconostoc kimchii IMSNU 11154] Length = 616 Score = 58.0 bits (139), Expect = 7e-07, Method: Composition-based stats. Identities = 39/184 (21%), Positives = 74/184 (40%), Gaps = 30/184 (16%) Query: 40 VYYDEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRT---- 93 +Y D + K A +I K A +IV F + ++Q+ + Sbjct: 426 LYLDMDVETMRTP--KFDAGMSLIRKLVAEGKKVIVWGMFVGTMRKVQRELLESGIEANL 483 Query: 94 ------LDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQM 147 + I + +G +P+L ++PA+ G ++L + V+F ++L Q Sbjct: 484 VYGDTPKESRVGLINNFRDGNVPVLISNPATLGESISLHQTVHDAVYFEYNFNLTFMLQS 543 Query: 148 IERIGVTRQRQAGFKRAVF--VYYLIAQNT------IDELVLQRLRTKSTIQDLLLNALK 199 +RI + G + YYL+ + ID+ V +RL+ K I +LNA+ Sbjct: 544 RDRI-----HRLGLPDNQYTRYYYLMTEGDHAHNGYIDQQVYERLKEKEII---MLNAID 595 Query: 200 KETI 203 + + Sbjct: 596 GDML 599 >gi|317145065|ref|XP_001819268.2| SNF2 family helicase/ATPase [Aspergillus oryzae RIB40] Length = 1472 Score = 58.0 bits (139), Expect = 7e-07, Method: Composition-based stats. Identities = 22/140 (15%), Positives = 46/140 (32%), Gaps = 12/140 (8%) Query: 68 AAPIIVAYHFNSDLARLQ---KAFPQGRTLDKDPCTIQEWNEGK-IPLLFAHPASCGHGL 123 ++ + L L F G + I ++ I F H + GL Sbjct: 1247 GGKSVIFSQYKDFLEVLAIAFHRFKIGFSSVDSKDGISKFKSDSSIECFFLHARAHSSGL 1306 Query: 124 NLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQR 183 NL + + + Q I R+ + G R V+ + +T++E + + Sbjct: 1307 NLVNATH-VFLCEPLINTAIELQAIARV-----HRIGQHRPTTVWMYLVSDTVEESIYEL 1360 Query: 184 LRTKSTIQDLLLNALKKETI 203 ++ ++ K E + Sbjct: 1361 SVSRRLAH--IVQKEKAEPL 1378 >gi|310792778|gb|EFQ28239.1| DNA repair protein RAD8 [Glomerella graminicola M1.001] Length = 1481 Score = 58.0 bits (139), Expect = 7e-07, Method: Composition-based stats. Identities = 33/193 (17%), Positives = 69/193 (35%), Gaps = 27/193 (13%) Query: 12 YCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVII--EKANAA 69 C ++G + S + L N + D E V KI +E II E + Sbjct: 1244 VCPVEGCQAFSQGSFAPWDTLLAKGNNEIDTDLE----AVPSSKILEIENIILDEVGDDE 1299 Query: 70 PIIVAYHFNSDLARLQKAFPQGRTL----------DKDPCTIQEWNEGKIPLLFAH--PA 117 +++ + + + G D+D TI + + + + + Sbjct: 1300 KVLIFAAYAGIKSEIHTQLFDGVDDSIGVYMTDGGDQDSQTIDSFKKHQGKAVLIQSLMS 1359 Query: 118 SCGHGLNLQYGGNIL---VFFSLWWDLEEH-QQMIERIGVTRQRQAGFKRAVFVYYLIAQ 173 S G NL +++ V F+ + + Q R+ + G R V +Y+L++ Sbjct: 1360 SESAGTNLTEANHVIFAGVLFTDSDNYTMYMNQAKGRVI-----RQGQTRKVAIYHLVSP 1414 Query: 174 NTIDELVLQRLRT 186 T++ + + + Sbjct: 1415 GTLEFDIFNQRQG 1427 >gi|171692877|ref|XP_001911363.1| hypothetical protein [Podospora anserina S mat+] gi|170946387|emb|CAP73188.1| unnamed protein product [Podospora anserina S mat+] Length = 1523 Score = 58.0 bits (139), Expect = 7e-07, Method: Composition-based stats. Identities = 25/162 (15%), Positives = 53/162 (32%), Gaps = 11/162 (6%) Query: 31 KCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQ 90 K Q+ + + D ++ L + A I+ + L L AF + Sbjct: 1251 KLSQIKS-IDLPSSGPSYTTKVDTLLRHLLWLRSSDPGAKSIIFSQYKEFLEVLALAFKR 1309 Query: 91 GRT----LDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 DK T ++ + + + GLNL ++ + + Q Sbjct: 1310 YHIGYTSFDKPNGTTSFKSDPSVEVFLLSARAHSSGLNLVNASHVFI-CEPMLNTALELQ 1368 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKS 188 I R+ + G ++ V+ + + T++E + K Sbjct: 1369 AIARVD-----RIGQEQETTVWLYLVEGTVEEGIYDLSVRKR 1405 >gi|326779112|ref|ZP_08238377.1| SNF2-related protein [Streptomyces cf. griseus XylebKG-1] gi|326659445|gb|EGE44291.1| SNF2-related protein [Streptomyces cf. griseus XylebKG-1] Length = 611 Score = 58.0 bits (139), Expect = 7e-07, Method: Composition-based stats. Identities = 29/141 (20%), Positives = 56/141 (39%), Gaps = 10/141 (7%) Query: 63 IEKANAAPIIVAYHFNSDLARLQKAFPQ-------GRTLDKDPCTIQEWNEGKIPLLFAH 115 +V F L+ +++ F G T D+ + + +L ++ Sbjct: 436 ANAEQGRKTLVWTTFVRSLSTMERMFAGYEPAVVHGGTPDRAEEIRRFREDPDCSVLLSN 495 Query: 116 PASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNT 175 PA+ G G++L + + V+ + Q ++RI G + V V L ++ T Sbjct: 496 PATLGEGISLHHVCHDAVYVDRDFMAGRFLQSLDRIHRLGL-APGTETNVTV--LASRGT 552 Query: 176 IDELVLQRLRTKSTIQDLLLN 196 +DE+V RL K +L+ Sbjct: 553 VDEVVALRLEEKLEFMGRILD 573 >gi|67539206|ref|XP_663377.1| hypothetical protein AN5773.2 [Aspergillus nidulans FGSC A4] gi|40743676|gb|EAA62866.1| hypothetical protein AN5773.2 [Aspergillus nidulans FGSC A4] Length = 2379 Score = 58.0 bits (139), Expect = 7e-07, Method: Composition-based stats. Identities = 26/137 (18%), Positives = 47/137 (34%), Gaps = 14/137 (10%) Query: 54 EKIKALEVII----EKANAAPIIVAYHFNSDLARLQ---KAFPQGRTLDKDPCTIQEWN- 105 KI L I E A IV + L L + F G + + I+++ Sbjct: 2131 TKIDTLARHILWLREHDPGAQSIVFSQYKGFLDYLANAFRRFKIGYSSVDESDGIEKFKK 2190 Query: 106 EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 + I H + GLNL + + + Q I R+ + G R Sbjct: 2191 DPGIECFLLHAKAHSSGLNLVNATH-VFLCEPLINTAIELQAIARV-----HRIGQHRPT 2244 Query: 166 FVYYLIAQNTIDELVLQ 182 V+ + +T+++ + Sbjct: 2245 TVWMYLISDTVEKSIYD 2261 >gi|239982028|ref|ZP_04704552.1| hypothetical protein SalbJ_21517 [Streptomyces albus J1074] gi|291453879|ref|ZP_06593269.1| helicase domain-containing protein [Streptomyces albus J1074] gi|291356828|gb|EFE83730.1| helicase domain-containing protein [Streptomyces albus J1074] Length = 608 Score = 58.0 bits (139), Expect = 7e-07, Method: Composition-based stats. Identities = 35/148 (23%), Positives = 62/148 (41%), Gaps = 11/148 (7%) Query: 57 KALEVIIE-KANAAPIIVAYHFNSDLARLQKAFPQ-------GRTLDKDPCTIQEWNEGK 108 +AL+++ E A +V F L +++ F G T D++ + + Sbjct: 427 EALKIVSENAAAGRKTLVWTTFVRSLTTMERLFATFEPAVVHGGTPDREEQIRRFRTDPD 486 Query: 109 IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVY 168 +L ++PA+ G G++L + V+ + Q ++RI R V V Sbjct: 487 CMVLLSNPATLGEGISLHRDCHDAVYVDRDFMAGRFLQSLDRIHRLGLAPDAETR-VTV- 544 Query: 169 YLIAQNTIDELVLQRLRTKSTIQDLLLN 196 L A+ TIDE+V RL K +L+ Sbjct: 545 -LAAERTIDEVVALRLEQKLEFMGKILD 571 >gi|326427519|gb|EGD73089.1| hypothetical protein PTSG_04803 [Salpingoeca sp. ATCC 50818] Length = 1649 Score = 58.0 bits (139), Expect = 7e-07, Method: Composition-based stats. Identities = 26/161 (16%), Positives = 53/161 (32%), Gaps = 34/161 (21%) Query: 44 EEKHWKEVHDEKIKALEVIIEKANAA--PIIVAYHFNSDLARLQKAFPQGRTLDKDPCTI 101 E H +V + ++AL + K +++ F+ L ++ + I Sbjct: 1473 EGGHSSKVCE-VLRALRRVFSKPTGHWNKVVIFSQFSDMLRLIR--------IGARENDI 1523 Query: 102 QEWNEGKIP----------------LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQ 145 + + + L S GLN+ + + Q Sbjct: 1524 RVFEAYESTQFKRALDEFKKATEHCALLLDIKSGSQGLNILEAQH-VFLLEPILHPGVEQ 1582 Query: 146 QMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRT 186 Q + R+ + G K V++ I ++I+ L+ LRT Sbjct: 1583 QAVARV-----HRIGQKHPTCVHHFIVTDSIESD-LEALRT 1617 >gi|156932814|ref|YP_001436730.1| hypothetical protein ESA_00610 [Cronobacter sakazakii ATCC BAA-894] gi|156531068|gb|ABU75894.1| hypothetical protein ESA_00610 [Cronobacter sakazakii ATCC BAA-894] Length = 1080 Score = 58.0 bits (139), Expect = 7e-07, Method: Composition-based stats. Identities = 30/201 (14%), Positives = 65/201 (32%), Gaps = 33/201 (16%) Query: 22 AFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKI----KALEVIIEKANAAPIIVAYHF 77 K + D H++ + K+ K L I + +I+ Sbjct: 872 GTGMLGLLHKLKLICAHPAVVDPAPHFR-DNSPKLNWLLKKLAEI-KATTKDKVIIFTEL 929 Query: 78 NSDLARLQKAF----------------PQGRTLDKDPCTIQEWNE-GKIPLLFAHPASCG 120 LQ A + + + I + ++ + G Sbjct: 930 RDLQRELQHAIYQKFGFRPVIINGDTSTKSHSQNSRQRLIDNFQSQPGFGIIILSTVAVG 989 Query: 121 HGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQN----TI 176 G+N+Q N ++ F+ W+ + Q +R + G + V+VYY ++ T Sbjct: 990 FGVNVQK-ANHVIHFTRCWNPAKEDQATDR-----AYRIGQTKDVYVYYPTVRDPEITTF 1043 Query: 177 DELVLQRLRTKSTIQDLLLNA 197 + + + L+ + + +L A Sbjct: 1044 EVTLDELLKRRRALAKDMLCA 1064 >gi|15964256|ref|NP_384609.1| putative helicase protein [Sinorhizobium meliloti 1021] gi|15073432|emb|CAC41940.1| Helicase-DNA-binding protein [Sinorhizobium meliloti 1021] Length = 1170 Score = 58.0 bits (139), Expect = 7e-07, Method: Composition-based stats. Identities = 40/220 (18%), Positives = 69/220 (31%), Gaps = 37/220 (16%) Query: 5 HKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVY-----YDEEKHWKEVHDEKIKAL 59 + E L+ I+ +A +L V + D K L Sbjct: 426 DELSAEEQESLEENLIDDATAAK---TVAELEAEIVILKGLEAQAKSVVASGQDRKWDEL 482 Query: 60 EVIIE--------KANAAPIIVAYHFNSDLARLQKAFPQ-------------GRTLDKDP 98 I++ II+ L LQ G D+ Sbjct: 483 SRILQNNPEMRDASGRQRKIIIFSEHRDTLNYLQARIAGVLGNPDAIVTIHGGTHRDERR 542 Query: 99 CTIQEWNEG-KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 + + +L A + G G+NLQ N++V + L W+ +Q RI Sbjct: 543 RLQALFRSDLDVRVLVA-TDAAGEGVNLQN-ANLMVNYDLPWNPNRLEQRFGRI-----H 595 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + G ++ L+A+ T + V RL K ++ L+ Sbjct: 596 RIGQTEVCHLWNLVAKETREGDVYHRLLLKLEVESQALHG 635 >gi|326929550|ref|XP_003210925.1| PREDICTED: e1A-binding protein p400-like [Meleagris gallopavo] Length = 2997 Score = 58.0 bits (139), Expect = 7e-07, Method: Composition-based stats. Identities = 24/171 (14%), Positives = 64/171 (37%), Gaps = 19/171 (11%) Query: 25 SASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLA 82 +A + ++ + + + K++AL V+++K + +++ L Sbjct: 1753 AAPHLHQLQRITTPQLLQFPDLRLVQYDSGKLEALAVLLQKLKSEGRRVLILSQMILMLD 1812 Query: 83 RLQ----------KAFPQGRTLDKDPCTIQEWNEGK-IPLLFAHPASCGHGLNLQYGGNI 131 L+ + ++ ++ +N K I S G+NL + Sbjct: 1813 ILELFLNFHFLTFVRIDEYANHEQRQELMKSFNRDKRIFCAILSSHSRSTGVNLVE-ADT 1871 Query: 132 LVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQ 182 +VF+ + + E + G + + +Y L++ N+++E +L+ Sbjct: 1872 VVFYDNDLNPVMDAKAQEWCD-----RIGRCKDIHIYRLVSGNSVEEKLLK 1917 >gi|168028268|ref|XP_001766650.1| SNF2 family DNA-dependent ATPase [Physcomitrella patens subsp. patens] gi|162682082|gb|EDQ68503.1| SNF2 family DNA-dependent ATPase [Physcomitrella patens subsp. patens] Length = 1180 Score = 58.0 bits (139), Expect = 7e-07, Method: Composition-based stats. Identities = 28/134 (20%), Positives = 48/134 (35%), Gaps = 17/134 (12%) Query: 64 EKANAAPIIVAYHFNSDLARLQ---------KAFPQGRTLDKDP-CTIQEWNE-GKIPLL 112 ++A II+ H L +Q G TL +D + + ++ + Sbjct: 423 DEATREKIIIFAHHLKVLDTIQTFVQSKGVEYVRIDGSTLPQDRLKNVNRFRSQREVKVA 482 Query: 113 FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIA 172 + G GL+ +VF L E Q +R + G K +V +Y +A Sbjct: 483 IVGLQAGGVGLDF-SAAQSVVFVELPKSASEMLQAEDR-----AHRRGQKNSVNIYIFVA 536 Query: 173 QNTIDELVLQRLRT 186 + T D+ Q L Sbjct: 537 KGTADDRHWQSLSR 550 >gi|322780853|gb|EFZ10082.1| hypothetical protein SINV_14375 [Solenopsis invicta] Length = 244 Score = 58.0 bits (139), Expect = 7e-07, Method: Composition-based stats. Identities = 19/110 (17%), Positives = 34/110 (30%), Gaps = 18/110 (16%) Query: 68 AAPIIVAYHFNSDLARL-----QKAFPQGRTLDK-----DPCTIQEWN-EGKIPL-LFAH 115 +++ L L ++ FP R + +N EG Sbjct: 141 GHRVLIFSQMVKMLDILGEYLQRRHFPFQRLDGSIKGELRKQALDHFNAEGSQDFCFLLS 200 Query: 116 PASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 + G G+NL + ++ F W+ + Q R + G K V Sbjct: 201 TRAGGLGINL-ATADTVIIFDSDWNPQNDLQAQAR-----AHRIGQKNKV 244 >gi|302414736|ref|XP_003005200.1| conserved hypothetical protein [Verticillium albo-atrum VaMs.102] gi|261356269|gb|EEY18697.1| conserved hypothetical protein [Verticillium albo-atrum VaMs.102] Length = 381 Score = 58.0 bits (139), Expect = 7e-07, Method: Composition-based stats. Identities = 30/158 (18%), Positives = 62/158 (39%), Gaps = 19/158 (12%) Query: 49 KEVHDEKIKALEV-IIEKANAAPIIVAY-------HFNSDLARLQ-KAFPQGRTL--DKD 97 K+ L IIE IIV Y + S L +Q + +TL + Sbjct: 106 VATASAKMTYLLDAIIEHYEHEKIIVFYENENTAWYIASMLDVIQIEHLIYAKTLTQKRK 165 Query: 98 PCTIQEWNEG-KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 I +N K ++ +GL++ + + F + + + Q I R Sbjct: 166 AQYINTFNNNTKFRVILMDITQAAYGLDM-RAASRIYFLNPVLNPQVEAQAIGR-----A 219 Query: 157 RQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 R+ ++AV V L+ + +++E+++ + K + + + Sbjct: 220 RRISQQKAVSVETLVLRGSLEEVII-MRKHKMSQAEHI 256 >gi|146422514|ref|XP_001487194.1| hypothetical protein PGUG_00571 [Meyerozyma guilliermondii ATCC 6260] Length = 1263 Score = 58.0 bits (139), Expect = 8e-07, Method: Composition-based stats. Identities = 20/82 (24%), Positives = 35/82 (42%), Gaps = 10/82 (12%) Query: 119 CGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDE 178 HGLN+ + + F S W Q I+R + G +AV V LI +NT++E Sbjct: 1065 AAHGLNITAATH-VYFTSPVWLRSVEAQAIKR-----AHRIGQTKAVRVETLILKNTLEE 1118 Query: 179 LVLQRL----RTKSTIQDLLLN 196 + ++ Q +++ Sbjct: 1119 EIYRKRSQETEENDREQKYVID 1140 >gi|83767127|dbj|BAE57266.1| unnamed protein product [Aspergillus oryzae] Length = 1442 Score = 58.0 bits (139), Expect = 8e-07, Method: Composition-based stats. Identities = 22/140 (15%), Positives = 46/140 (32%), Gaps = 12/140 (8%) Query: 68 AAPIIVAYHFNSDLARLQ---KAFPQGRTLDKDPCTIQEWNEGK-IPLLFAHPASCGHGL 123 ++ + L L F G + I ++ I F H + GL Sbjct: 1217 GGKSVIFSQYKDFLEVLAIAFHRFKIGFSSVDSKDGISKFKSDSSIECFFLHARAHSSGL 1276 Query: 124 NLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQR 183 NL + + + Q I R+ + G R V+ + +T++E + + Sbjct: 1277 NLVNATH-VFLCEPLINTAIELQAIARV-----HRIGQHRPTTVWMYLVSDTVEESIYEL 1330 Query: 184 LRTKSTIQDLLLNALKKETI 203 ++ ++ K E + Sbjct: 1331 SVSRRLAH--IVQKEKAEPL 1348 >gi|322493527|emb|CBZ28815.1| hypothetical protein, unknown function [Leishmania mexicana MHOM/GT/2001/U1103] Length = 1232 Score = 58.0 bits (139), Expect = 8e-07, Method: Composition-based stats. Identities = 17/102 (16%), Positives = 40/102 (39%), Gaps = 7/102 (6%) Query: 96 KDPCTIQEW-NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 + +++ + + + G G+NLQ +++V + Q + R+ Sbjct: 796 ERLTSVRRFREDPACLFFLLSIKAGGCGINLQ-AAHMVVLVDRDYTATNEDQALARV--- 851 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + G + V YL + ++ V QR K+ + ++N Sbjct: 852 --YRIGQRYTVRAVYLATTDASEQRVAQRAAAKNKPRQAIIN 891 >gi|146320818|ref|YP_001200529.1| DNA methylase [Streptococcus suis 98HAH33] gi|145691624|gb|ABP92129.1| DNA methylase [Streptococcus suis 98HAH33] Length = 308 Score = 58.0 bits (139), Expect = 8e-07, Method: Composition-based stats. Identities = 22/98 (22%), Positives = 39/98 (39%), Gaps = 4/98 (4%) Query: 90 QGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIE 149 T +K ++ N G++ +L A G GLN+Q + + W + Q Sbjct: 17 DANTDEKKNSLSRKVNSGEVRILMASTEKGGTGLNVQSRMKAVHHLDVPWRPSDIVQRNG 76 Query: 150 RIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTK 187 R+ RQ + V +Y+ I + + D + Q K Sbjct: 77 RLI----RQGNMHQEVDIYHYITKGSFDNYLWQTQENK 110 >gi|23503224|gb|AAC43199.2| similar to Swiss-Prot Accession Number P32333, yeast helicase protein [Mycoplasma genitalium] Length = 72 Score = 58.0 bits (139), Expect = 8e-07, Method: Composition-based stats. Identities = 15/44 (34%), Positives = 22/44 (50%) Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 +E R + G + V VY +IA+NTI+E V Q K + Sbjct: 4 AVENQATDRAHRIGQSKTVQVYRIIAKNTIEERVCQVQNQKQEL 47 >gi|312863051|ref|ZP_07723289.1| helicase C-terminal domain protein [Streptococcus vestibularis F0396] gi|311100587|gb|EFQ58792.1| helicase C-terminal domain protein [Streptococcus vestibularis F0396] Length = 931 Score = 58.0 bits (139), Expect = 8e-07, Method: Composition-based stats. Identities = 22/98 (22%), Positives = 39/98 (39%), Gaps = 4/98 (4%) Query: 90 QGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIE 149 T +K ++ N G++ +L A G GLN+Q + + W + Q Sbjct: 562 DANTDEKKNSLSRKVNSGEVRILMASTEKGGTGLNVQSRMKAVHHLDVPWRPSDIVQRNG 621 Query: 150 RIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTK 187 R+ RQ + V +Y+ I + + D + Q K Sbjct: 622 RLI----RQGNMHQEVDIYHYITKGSFDNYLWQTQENK 655 >gi|239611704|gb|EEQ88691.1| SNF2 family helicase/ATPase [Ajellomyces dermatitidis ER-3] Length = 1503 Score = 58.0 bits (139), Expect = 8e-07, Method: Composition-based stats. Identities = 21/119 (17%), Positives = 41/119 (34%), Gaps = 10/119 (8%) Query: 68 AAPIIVAYHFNSDLARLQKAFPQGRT----LDKDPCTIQEWNEGKIPLLFAHPASCGHGL 123 A IV + L L +AF + +D + ++ I H + GL Sbjct: 1250 GAKSIVFSQYKPFLGILARAFSHFKIGFSSIDSHDGVERFKSDPSIECFLLHAKAHASGL 1309 Query: 124 NLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQ 182 NL + + + Q I R+ + G R V+ + ++++E + Sbjct: 1310 NLIDATH-VFLCEPLINTAIELQAIARV-----HRIGQHRETTVWMYLVSDSVEECIYD 1362 >gi|209523622|ref|ZP_03272176.1| helicase domain protein [Arthrospira maxima CS-328] gi|209496027|gb|EDZ96328.1| helicase domain protein [Arthrospira maxima CS-328] Length = 1175 Score = 58.0 bits (139), Expect = 8e-07, Method: Composition-based stats. Identities = 38/221 (17%), Positives = 73/221 (33%), Gaps = 43/221 (19%) Query: 5 HKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIE 64 K + E DL + ++ + QL A ++ + D K + L ++E Sbjct: 440 EKIETE-VVDLATASRTVQELQTEIERLRQLEELA-----QRVRRSGKDCKWEQLSKVME 493 Query: 65 --------KANA---------APIIVAYHFNSDLARLQKAFPQ--GRT-----------L 94 N +++ L L+ GR Sbjct: 494 NEIFAFPNPQNGDHEPGQKALRKLVIFTEHRDTLNYLRDRIKTLLGRPEAVVTIHGSMGR 553 Query: 95 DKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 D+ +++ + + + G G+NLQ +++V + L W+ +Q RI Sbjct: 554 DERKKAEEDFKQDVTVQVLVATDAAGEGINLQR-AHLMVNYDLPWNPNRLEQRFGRI--- 609 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTI-QDLL 194 + G ++ L+A T + V L K I Q+ L Sbjct: 610 --HRIGQTEVCHLWNLVAGETREGDVYLSLLRKLEIEQNAL 648 >gi|118382598|ref|XP_001024455.1| Helicase conserved C-terminal domain containing protein [Tetrahymena thermophila] gi|89306222|gb|EAS04210.1| Helicase conserved C-terminal domain containing protein [Tetrahymena thermophila SB210] Length = 413 Score = 58.0 bits (139), Expect = 8e-07, Method: Composition-based stats. Identities = 25/139 (17%), Positives = 47/139 (33%), Gaps = 19/139 (13%) Query: 68 AAPIIVAYHFNSDLARLQKAFPQGRT----------LDKDPCTIQEWNE-GKIPLLFAHP 116 +I+ F S L LQK I+ ++E + + Sbjct: 209 KEKVIIYSQFLSFLTYLQKVLNDRDVRYTRLDGTMNKKDRATAIKTFSEQSEFTAILISL 268 Query: 117 ASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTI 176 + GLNL N + W++ + + V V I +++I Sbjct: 269 KAGAFGLNL-VAANHVFICDPWYNPAIEVFLSANNI------IRQTKRVQVINFIMESSI 321 Query: 177 DELVLQRLRTKSTI-QDLL 194 +E +LQ + K ++ Q+ L Sbjct: 322 EERILQCQKKKRSLIQNTL 340 >gi|310792552|gb|EFQ28079.1| SNF2 family domain-containing protein [Glomerella graminicola M1.001] Length = 1457 Score = 58.0 bits (139), Expect = 8e-07, Method: Composition-based stats. Identities = 23/124 (18%), Positives = 44/124 (35%), Gaps = 10/124 (8%) Query: 64 EKANAAPIIVAYHFNSDLARLQKAFPQGR----TLDKDPCTIQEWNEGKIPLLFAHPASC 119 E A IV + S L L AF + + T+D+ + + + H + Sbjct: 1252 ESDPGAKSIVFTQYKSFLEILGAAFDRYKIGFSTIDRPNGITRFKEDPGVECFMLHGRAN 1311 Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 GLNL + + + Q I R+ + G K V+ + + +++E Sbjct: 1312 SSGLNLVNASH-VFLCEPLLNTALELQAIARVD-----RIGQKNETTVWLYLIEGSVEES 1365 Query: 180 VLQR 183 + Sbjct: 1366 IYNL 1369 >gi|145347826|ref|XP_001418362.1| predicted protein [Ostreococcus lucimarinus CCE9901] gi|144578591|gb|ABO96655.1| predicted protein [Ostreococcus lucimarinus CCE9901] Length = 1432 Score = 58.0 bits (139), Expect = 8e-07, Method: Composition-based stats. Identities = 29/140 (20%), Positives = 55/140 (39%), Gaps = 14/140 (10%) Query: 67 NAAPIIVAYHFNSDLARLQKA-------FPQGRTLDKDPCTIQEWN-EGKIPLLFAHPAS 118 + A +IV ++ L ++KA F +G + K I + + +L Sbjct: 1248 DDAKMIVFSEWDDVLDVVEKAMRANEIRFVRGVSGPKFRDVIDTFKHDAACNVLLLPLKR 1307 Query: 119 CGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDE 178 HGLNL ++L+ D Q I+R+ + G R V+ ++TI+E Sbjct: 1308 GAHGLNLTEAQHVLLL-EPVLDPGMEAQAIKRVD-----RIGQTRPTCVHRFFIRDTIEE 1361 Query: 179 LVLQRLRTKSTIQDLLLNAL 198 V R ++ + + + Sbjct: 1362 NVHNFSRQRADAMSDIASDV 1381 >gi|257052779|ref|YP_003130612.1| helicase domain protein [Halorhabdus utahensis DSM 12940] gi|256691542|gb|ACV11879.1| helicase domain protein [Halorhabdus utahensis DSM 12940] Length = 952 Score = 58.0 bits (139), Expect = 8e-07, Method: Composition-based stats. Identities = 27/162 (16%), Positives = 60/162 (37%), Gaps = 25/162 (15%) Query: 46 KHWKEVHDEKIKALEV--IIEKANAAPIIVAYHFNSDLARLQK----------------- 86 D K++ L + + N+ I+ + L L++ Sbjct: 472 DKVTPTRDSKLQKLLDQTLPARFNSGGTIIFTKYIDTLEYLEEGIEEFLEENHPDVELYT 531 Query: 87 AFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 + T ++D +++ + + G+NLQY N ++ + L W+ +Q Sbjct: 532 LHGKLNTAERDER-FEQFADADRGV-LVSTDVISEGMNLQYAANQVIHYELPWNPNRLEQ 589 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKS 188 R+ Q++ VF+ ++ + +D VL +L K+ Sbjct: 590 RNGRVDRYGQKR----DKVFIRTMVVDDPMDRTVLTKLIKKA 627 >gi|220907512|ref|YP_002482823.1| helicase domain-containing protein [Cyanothece sp. PCC 7425] gi|219864123|gb|ACL44462.1| helicase domain protein [Cyanothece sp. PCC 7425] Length = 1194 Score = 58.0 bits (139), Expect = 8e-07, Method: Composition-based stats. Identities = 35/173 (20%), Positives = 63/173 (36%), Gaps = 26/173 (15%) Query: 28 KTVKCLQLANGAVYYDEEKHWKEV-----HDEKIKALEVIIEKANAAPIIVAYHFNSDLA 82 + K LQ +G +D H +++ H + + L I P + Sbjct: 488 ELSKLLQ--SGTEMFDAGGHRRKLVIFTEHRDTLNYLTERIGTLLGRPEAIV-------- 537 Query: 83 RLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLE 142 + K + + K+ +L A + G G+NLQ +++V + L W+ Sbjct: 538 -IIHGGMGRDERKKAEEGFK--QDIKVEVLVA-TDAAGEGINLQR-AHLMVNYDLPWNPN 592 Query: 143 EHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTI-QDLL 194 +Q RI + G ++ L+A+ T + V L K I Q L Sbjct: 593 RLEQRFGRI-----HRIGQTEVCHLWNLVAEETREGDVYLSLLKKLEIEQKAL 640 >gi|56475568|ref|YP_157157.1| ATP-dependent helicase [Aromatoleum aromaticum EbN1] gi|56311611|emb|CAI06256.1| ATP-dependent helicase [Aromatoleum aromaticum EbN1] Length = 980 Score = 58.0 bits (139), Expect = 8e-07, Method: Composition-based stats. Identities = 26/108 (24%), Positives = 41/108 (37%), Gaps = 11/108 (10%) Query: 91 GRTLDKDPCTIQEWNEGKIPL-LFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIE 149 G T + ++ + + P+ L GLNL Y + LV F L W L QQ Sbjct: 486 GMTDTEQQSIVERFGRKEDPIRLLLCSDVASEGLNLHYFCHRLVHFDLPWSLMVFQQRNG 545 Query: 150 RIGVTRQRQAGFKRAVFVYYLIAQNTI-----DELVLQRLRTKSTIQD 192 R+ + G + YL + I D +L+ L+ K + Sbjct: 546 RVD-----RYGQTHQPQIIYLFTETRIQRVKGDLRILEILQEKDEQAN 588 >gi|83950945|ref|ZP_00959678.1| helicase [Roseovarius nubinhibens ISM] gi|83838844|gb|EAP78140.1| helicase [Roseovarius nubinhibens ISM] Length = 912 Score = 57.6 bits (138), Expect = 8e-07, Method: Composition-based stats. Identities = 33/136 (24%), Positives = 53/136 (38%), Gaps = 25/136 (18%) Query: 63 IEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHG 122 +E+ +I A + +AF +D I + G G Sbjct: 443 VERHKGTSVISGSKAADTKAAIVEAF-------RDDADI-----------LIATEAGGEG 484 Query: 123 LNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQ-NTIDELVL 181 +NLQ+ ++LV F L W+ + +Q I R+ + G K V V I + N DE V Sbjct: 485 VNLQF-CSLLVNFDLPWNPQRVEQRIGRV-----HRYGQKCDVVVVNFINRSNRADERVF 538 Query: 182 QRLRTKSTIQDLLLNA 197 + L K + D + A Sbjct: 539 ELLEEKFALFDGVFGA 554 >gi|261377777|ref|ZP_05982350.1| helicase/SNF2 domain protein [Neisseria cinerea ATCC 14685] gi|269146067|gb|EEZ72485.1| helicase/SNF2 domain protein [Neisseria cinerea ATCC 14685] Length = 943 Score = 57.6 bits (138), Expect = 9e-07, Method: Composition-based stats. Identities = 29/106 (27%), Positives = 48/106 (45%), Gaps = 11/106 (10%) Query: 94 LDKDPCTIQEW-NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIG 152 +DK I + N+ KI + S G+NLQ+ ++L+ + L W+ + +Q I R Sbjct: 479 VDKRTALIDAFKNQAKIMIA---TESAAEGVNLQF-CSLLINYDLPWNPQRIEQRIGRC- 533 Query: 153 VTRQRQAGFKRAVFVYYLI-AQNTIDELVLQRLRTKSTIQDLLLNA 197 + G K V V + +N D VL+ L K + D + A Sbjct: 534 ----HRYGQKSDVVVINFLNTRNDADRRVLELLTDKFKLFDGVFGA 575 >gi|320530347|ref|ZP_08031412.1| protein, SNF2 family [Selenomonas artemidis F0399] gi|320137407|gb|EFW29324.1| protein, SNF2 family [Selenomonas artemidis F0399] Length = 1167 Score = 57.6 bits (138), Expect = 9e-07, Method: Composition-based stats. Identities = 31/188 (16%), Positives = 71/188 (37%), Gaps = 26/188 (13%) Query: 17 GENIEAFNSASKTVKCLQ-LANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAY 75 + I + + +K L+ +A+ ++ W E+ + ++ + E ++ Sbjct: 446 AQTIAELEAEIRMLKNLEHMADSVRQSGTDRKWDEL-SKLLQDDATMFEGDGTREKLII- 503 Query: 76 HFNSDLARLQKAFPQGRTLDKDPCTI----------------QEWNEGKIPLLFAHPASC 119 F L+ + R+L + + + + K + + Sbjct: 504 -FTEHRDTLRYLTDKIRSLLGREEAVVTIHGGMLRDDRCKVEELFKQDKEVRILIATDAA 562 Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 G G+NLQ +++V + L W+ +Q RI + G ++ L+++ T + + Sbjct: 563 GEGINLQR-AHLMVNYDLPWNPNRLEQRFGRI-----HRIGQTEVCHLWNLVSKETREGM 616 Query: 180 VLQRLRTK 187 V QRL K Sbjct: 617 VFQRLFDK 624 >gi|225434275|ref|XP_002275596.1| PREDICTED: hypothetical protein [Vitis vinifera] Length = 944 Score = 57.6 bits (138), Expect = 9e-07, Method: Composition-based stats. Identities = 22/130 (16%), Positives = 51/130 (39%), Gaps = 22/130 (16%) Query: 65 KANAAPIIVAYHFNSDLARLQKA------FPQGRTL---------DKDPCTIQEWN-EGK 108 ++ ++V + L L+K + G+ + ++ +++ +N Sbjct: 763 QSAGEKLLVFSQYLLPLRFLEKLTMKVNGWSSGKEIFVISGESSSEQREWSMERFNTSPD 822 Query: 109 IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVY 168 + F +CG G++L +L+ + R + R + G K+ V VY Sbjct: 823 ARVFFGSIKACGEGISLVGASRVLILD------VHLNPSVTRQAIGRAFRPGQKKKVHVY 876 Query: 169 YLIAQNTIDE 178 L+A ++ +E Sbjct: 877 KLVAADSPEE 886 >gi|85085403|ref|XP_957501.1| hypothetical protein NCU04424 [Neurospora crassa OR74A] gi|28918593|gb|EAA28265.1| predicted protein [Neurospora crassa OR74A] Length = 405 Score = 57.6 bits (138), Expect = 9e-07, Method: Composition-based stats. Identities = 26/165 (15%), Positives = 55/165 (33%), Gaps = 15/165 (9%) Query: 33 LQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGR 92 LQ + V E + + I I + + + ++ +A + Sbjct: 234 LQPGSHFVNAGESPDPTGLLGDAIADTIDINSSLQTD--LFSTKLKAVRKQVLEAGTGTK 291 Query: 93 TLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERI 151 + + I+ + + + +L + GLNL ++ V W+ Q I R Sbjct: 292 HISERTRLIRTFQGDPQAFILIMSVGTGAVGLNLTAASHVHV-VEPHWNPSVEAQAIAR- 349 Query: 152 GVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + G + V V I + T+++ K T+ L + Sbjct: 350 ----AVRMGQTKNVLVTRYIMKRTVED------TKKQTLAKLTFD 384 >gi|297739847|emb|CBI30029.3| unnamed protein product [Vitis vinifera] Length = 1695 Score = 57.6 bits (138), Expect = 9e-07, Method: Composition-based stats. Identities = 31/184 (16%), Positives = 62/184 (33%), Gaps = 64/184 (34%) Query: 27 SKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARL 84 ++T++ +Q G K++ L V++ K + ++ L L Sbjct: 798 TETLRLIQFDCG----------------KLQELAVLLRKLKSEGHRALIFTQMTKMLDVL 841 Query: 85 Q---------KAFPQGRTLDKDPCTI-QEWN-EGKIPLLFAHPASCGHGLNLQYGGNILV 133 + G T ++ T+ Q +N KI + S Sbjct: 842 EAFINLYGYTYMRLDGSTQPEERQTLMQRFNTNPKIFIFILSTRS--------------- 886 Query: 134 FFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDL 193 R + G R V +Y LI+++TI+E +L++ K + DL Sbjct: 887 --------------------DRCHRIGQTREVHIYRLISESTIEENILKKANQKRALDDL 926 Query: 194 LLNA 197 ++ + Sbjct: 927 VIQS 930 >gi|312877476|ref|ZP_07737438.1| helicase domain protein [Caldicellulosiruptor lactoaceticus 6A] gi|311795732|gb|EFR12099.1| helicase domain protein [Caldicellulosiruptor lactoaceticus 6A] Length = 337 Score = 57.6 bits (138), Expect = 9e-07, Method: Composition-based stats. Identities = 30/149 (20%), Positives = 65/149 (43%), Gaps = 22/149 (14%) Query: 53 DEKIKALEVIIEKA----NAAPIIVAYHFNSDLARLQKAFPQ----------GRTLDKDP 98 + K+ L+ +I++ ++V L L + + G +D+ Sbjct: 163 ETKLVRLKEVIDQERIRETGTKLLVFTESRDTLEYLAEKLKEWGYAVVTIHGGMNMDERI 222 Query: 99 CTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQ 158 E+ + K ++ A + G G+NLQ+ ++V + + W+ +Q + RI + Sbjct: 223 RAEHEF-KNKAQVMVA-TEAAGEGINLQF-CWLMVNYDIPWNPNRLEQRMGRI-----HR 274 Query: 159 AGFKRAVFVYYLIAQNTIDELVLQRLRTK 187 G + V +Y L++ +T + +LQ+L K Sbjct: 275 YGQQSEVHIYNLVSGDTKEGQILQKLFQK 303 >gi|323449667|gb|EGB05553.1| hypothetical protein AURANDRAFT_17570 [Aureococcus anophagefferens] Length = 76 Score = 57.6 bits (138), Expect = 9e-07, Method: Composition-based stats. Identities = 21/78 (26%), Positives = 29/78 (37%), Gaps = 6/78 (7%) Query: 110 PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYY 169 + S G GLNL N+L D +Q + R+ + G R V V Sbjct: 5 SVCLLTVRSAGVGLNLTN-ANVLCLCEPALDAAPEEQAVMRV-----HRIGQTRPVTVLK 58 Query: 170 LIAQNTIDELVLQRLRTK 187 A T+D VL R + Sbjct: 59 FFAAGTVDARVLARRERR 76 >gi|291530902|emb|CBK96487.1| DNA methylase [Eubacterium siraeum 70/3] Length = 2598 Score = 57.6 bits (138), Expect = 9e-07, Method: Composition-based stats. Identities = 21/92 (22%), Positives = 37/92 (40%), Gaps = 4/92 (4%) Query: 106 EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 +G + +L A CG G N+Q L W + +Q RI RQ V Sbjct: 2261 KGDVRVLLGSTAKCGAGTNVQDKLIALHHLDCPWRPADLEQREGRII----RQGNQNDKV 2316 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 ++Y + ++T D + Q + K ++ + Sbjct: 2317 YIYRYVTKDTFDAYLYQIIENKQKGISQIMTS 2348 >gi|190890732|ref|YP_001977274.1| putative helicase/DNA methylase hybrid protein [Rhizobium etli CIAT 652] gi|190696011|gb|ACE90096.1| putative helicase/DNA methylase hybrid protein [Rhizobium etli CIAT 652] Length = 1324 Score = 57.6 bits (138), Expect = 9e-07, Method: Composition-based stats. Identities = 28/108 (25%), Positives = 49/108 (45%), Gaps = 11/108 (10%) Query: 92 RTLDKDPCTIQEW-NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 RT D + + +EG+I + + G+NLQ+ +++V + L W+ + +Q I R Sbjct: 483 RTADMRSALVDYFRDEGQIMIA---TEAGAEGINLQF-CSLVVNYDLPWNPQRVEQRIGR 538 Query: 151 IGVTRQRQAGFKRAVFVYYLIA-QNTIDELVLQRLRTKSTIQDLLLNA 197 + G K V V I +N D+ V Q L K + + + A Sbjct: 539 C-----HRYGQKHDVVVVNFINRKNEADQRVYQLLSEKFRLFEGVFGA 581 >gi|121709908|ref|XP_001272570.1| SNF2 family helicase/ATPase, putative [Aspergillus clavatus NRRL 1] gi|119400720|gb|EAW11144.1| SNF2 family helicase/ATPase, putative [Aspergillus clavatus NRRL 1] Length = 1473 Score = 57.6 bits (138), Expect = 9e-07, Method: Composition-based stats. Identities = 33/185 (17%), Positives = 60/185 (32%), Gaps = 33/185 (17%) Query: 36 ANGAVYYD-EEKHWKEVHD--------EKIKALEVII----EKANAAPIIVAYHFNSDLA 82 +N +Y D KE+ + KI L I E A I+ + + L Sbjct: 1212 SNNFIYADISSGTLKEIKNIDLDGSFGTKIDTLARHILWLREHDPGAKSIIFSQYKTFLE 1271 Query: 83 RLQKAFPQGRTLDKD---PCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLW 138 L AF + + I+ + + I F H + GLNL + + Sbjct: 1272 VLGTAFARFKIGYSSIDYADGIERFKSDPAIECFFLHAKAQSSGLNLVNATH-VFLCEPL 1330 Query: 139 WDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQR----------LRTKS 188 + Q I R+ + G R V+ + +T+++ + + K+ Sbjct: 1331 VNTAIELQAIARV-----HRIGQHRPTTVWMYLVSDTVEQSIYDLSVSRRLSHIFQKEKT 1385 Query: 189 TIQDL 193 Q Sbjct: 1386 EAQGA 1390 >gi|227829955|ref|YP_002831734.1| helicase domain protein [Sulfolobus islandicus L.S.2.15] gi|227456402|gb|ACP35089.1| helicase domain protein [Sulfolobus islandicus L.S.2.15] Length = 895 Score = 57.6 bits (138), Expect = 1e-06, Method: Composition-based stats. Identities = 23/152 (15%), Positives = 56/152 (36%), Gaps = 22/152 (14%) Query: 52 HDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQG-------------RTLDK 96 D ++KAL ++ +I+ + + T+++ Sbjct: 378 SDSRVKALINLVGTHLNKGDKVIIFTEYKDTANYILGKLKDALNLTDREIKVVTSVTINQ 437 Query: 97 DPCT-IQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTR 155 + I+ W E K + GLNLQ N+++ + + + +Q R+ Sbjct: 438 EGIDRIKGWLESKESKVLIATDVASEGLNLQ-SANVIIHYEIPLSIVRFEQRNGRVW--- 493 Query: 156 QRQAGFKRAVFVYYLIAQNTIDELVLQRLRTK 187 + + V++YY+ + +++ +L+ K Sbjct: 494 --RLKQTKPVYIYYISLKIPLEQALLENYYNK 523 >gi|255544007|ref|XP_002513066.1| conserved hypothetical protein [Ricinus communis] gi|223548077|gb|EEF49569.1| conserved hypothetical protein [Ricinus communis] Length = 1322 Score = 57.6 bits (138), Expect = 1e-06, Method: Composition-based stats. Identities = 24/142 (16%), Positives = 48/142 (33%), Gaps = 16/142 (11%) Query: 69 APIIVAYHFNSDLARLQKAFPQGRTL----------DKDPCTIQEWNEGKIPLLFAHPAS 118 +++ F + +++ ++ + L S Sbjct: 1154 EKVLIFSQFLEHIHVIEQQLTFAGIKFAGLYSPMHSSNKMKSLATFQHDATCLALLMDGS 1213 Query: 119 CGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDE 178 GL+L + + + WD +Q+I R + G R V V L + TI+E Sbjct: 1214 AALGLDLSFVTH-VFLMEPIWDRSMEEQVISR-----AHRMGATRPVQVETLAMRGTIEE 1267 Query: 179 LVLQRLRTKSTIQDLLLNALKK 200 +L+ L+ + LL +K Sbjct: 1268 QMLEFLQDADECRKLLKEEFRK 1289 >gi|42567734|ref|NP_196398.2| SNF2 domain-containing protein / helicase domain-containing protein / HNH endonuclease domain-containing protein [Arabidopsis thaliana] gi|332003824|gb|AED91207.1| SNF2 and helicase domain-containing protein [Arabidopsis thaliana] Length = 1190 Score = 57.6 bits (138), Expect = 1e-06, Method: Composition-based stats. Identities = 40/201 (19%), Positives = 70/201 (34%), Gaps = 42/201 (20%) Query: 16 QGENIEAFNS-ASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVII----------- 63 + ++ A NS + K QL Y +++ K+ A + Sbjct: 491 EAGHVNAENSDGPNSDKENQLCGKLSY-------QQLGIAKLSAFREWLSLHPLLSGLDY 543 Query: 64 --EKANA----APIIVAYHFNSDLARLQKAF---------PQGRTLDKDPC-TIQEWN-E 106 E+ + ++V H + L +Q+ G TL +D +Q + Sbjct: 544 TPEEIDGDRSSTKMVVFAHHHKVLDGIQEFICDKGIGFVRIDGTTLPRDRQLAVQSFQFS 603 Query: 107 GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVF 166 ++ + + G GL+ N +VF L Q +R + G AV Sbjct: 604 SEVKIAIIGVEAGGVGLDFSAAQN-VVFLELPKTPSLLLQAEDR-----AHRRGQTSAVN 657 Query: 167 VYYLIAQNTIDELVLQRLRTK 187 VY A++T+DE Q L K Sbjct: 658 VYIFCAKDTMDESNWQNLNKK 678 >gi|10176715|dbj|BAB09945.1| unnamed protein product [Arabidopsis thaliana] Length = 1178 Score = 57.6 bits (138), Expect = 1e-06, Method: Composition-based stats. Identities = 40/201 (19%), Positives = 70/201 (34%), Gaps = 42/201 (20%) Query: 16 QGENIEAFNS-ASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVII----------- 63 + ++ A NS + K QL Y +++ K+ A + Sbjct: 479 EAGHVNAENSDGPNSDKENQLCGKLSY-------QQLGIAKLSAFREWLSLHPLLSGLDY 531 Query: 64 --EKANA----APIIVAYHFNSDLARLQKAF---------PQGRTLDKDPC-TIQEWN-E 106 E+ + ++V H + L +Q+ G TL +D +Q + Sbjct: 532 TPEEIDGDRSSTKMVVFAHHHKVLDGIQEFICDKGIGFVRIDGTTLPRDRQLAVQSFQFS 591 Query: 107 GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVF 166 ++ + + G GL+ N +VF L Q +R + G AV Sbjct: 592 SEVKIAIIGVEAGGVGLDFSAAQN-VVFLELPKTPSLLLQAEDR-----AHRRGQTSAVN 645 Query: 167 VYYLIAQNTIDELVLQRLRTK 187 VY A++T+DE Q L K Sbjct: 646 VYIFCAKDTMDESNWQNLNKK 666 >gi|317055081|ref|YP_004103548.1| SNF2-like protein [Ruminococcus albus 7] gi|315447350|gb|ADU20914.1| SNF2-related protein [Ruminococcus albus 7] Length = 305 Score = 57.6 bits (138), Expect = 1e-06, Method: Composition-based stats. Identities = 16/40 (40%), Positives = 25/40 (62%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVY 41 + Y + +R+L +I+A N+AS + K LQ+ANGAV Sbjct: 259 RLYDQMKRDLIIPTDDGDIDAANAASLSNKLLQMANGAVM 298 >gi|163796533|ref|ZP_02190492.1| superfamily II DNA/RNA helicase, SNF2 family protein [alpha proteobacterium BAL199] gi|159178093|gb|EDP62638.1| superfamily II DNA/RNA helicase, SNF2 family protein [alpha proteobacterium BAL199] Length = 1198 Score = 57.6 bits (138), Expect = 1e-06, Method: Composition-based stats. Identities = 20/82 (24%), Positives = 40/82 (48%), Gaps = 7/82 (8%) Query: 106 EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 + ++ +L A + G G+NLQ +++V + L W+ +Q RI + G Sbjct: 584 DPEVQVLLA-TDAAGEGINLQR-AHLMVNYDLPWNPNRLEQRFGRI-----HRIGQTEVC 636 Query: 166 FVYYLIAQNTIDELVLQRLRTK 187 ++ L+A+ T + V ++L K Sbjct: 637 HLWNLVAEETREGDVYRKLLEK 658 >gi|115387363|ref|XP_001211187.1| hypothetical protein ATEG_02009 [Aspergillus terreus NIH2624] gi|114195271|gb|EAU36971.1| hypothetical protein ATEG_02009 [Aspergillus terreus NIH2624] Length = 1162 Score = 57.6 bits (138), Expect = 1e-06, Method: Composition-based stats. Identities = 19/136 (13%), Positives = 35/136 (25%), Gaps = 44/136 (32%) Query: 68 AAPIIVAYHFNSDLARLQKAFPQGRTL----------DKDPCTIQEWNEGKI-------- 109 +V F S L + + + ++N+ + Sbjct: 1020 GTKSVVFSQFTSFLDLISPQLTKAGITHVRLDGSMSHKARAEVLAKFNKTETFNQEEIED 1079 Query: 110 --------------------PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIE 149 +L + G GLNL N+ + WW Q I+ Sbjct: 1080 EEGIMTPRKKASTSQTEPSPQVLLISLRAGGVGLNLTTASNVFMM-DPWWSFAIEAQAID 1138 Query: 150 RIGVTRQRQAGFKRAV 165 R+ + G R + Sbjct: 1139 RV-----HRMGQLRDI 1149 >gi|302554146|ref|ZP_07306488.1| helicase domain-containing protein [Streptomyces viridochromogenes DSM 40736] gi|302471764|gb|EFL34857.1| helicase domain-containing protein [Streptomyces viridochromogenes DSM 40736] Length = 1072 Score = 57.6 bits (138), Expect = 1e-06, Method: Composition-based stats. Identities = 35/175 (20%), Positives = 62/175 (35%), Gaps = 21/175 (12%) Query: 32 CLQLANGAVYYDEEKHWKEVHDEKIKALE-VIIEKANAAPIIVAYHFNSDLARLQKAFPQ 90 Q+ A+ D + D K L I N ++ + A + K Sbjct: 426 LRQI--EAILADRGYEPSKWRDLTAKCLAANGIHPGNGEQAVIFTEYADSAAWIVKRLAD 483 Query: 91 ---------GRTLDKDPCTIQ-EWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWD 140 GR D + + + + + G++LQ ++LV + + W Sbjct: 484 EGYSARMYSGRQRSADRDEARSAFMRSEYQI-IVTTDAGNEGIDLQ-AAHVLVNYDIPWS 541 Query: 141 LEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTID-ELVLQRLRTKSTIQDLL 194 L +Q + RI + G R VF+Y L+A +T + E + L T + L Sbjct: 542 LVRLEQRMGRI-----HRVGQTRDVFLYNLVAVDTREGETLHTLLERFVTAANEL 591 >gi|154278960|ref|XP_001540293.1| predicted protein [Ajellomyces capsulatus NAm1] gi|150412236|gb|EDN07623.1| predicted protein [Ajellomyces capsulatus NAm1] Length = 1538 Score = 57.6 bits (138), Expect = 1e-06, Method: Composition-based stats. Identities = 20/119 (16%), Positives = 41/119 (34%), Gaps = 10/119 (8%) Query: 68 AAPIIVAYHFNSDLARLQKAFPQGRT----LDKDPCTIQEWNEGKIPLLFAHPASCGHGL 123 A IV + L L +AF + +D + + + H + GL Sbjct: 1176 GAKSIVFSQYKPFLGILGRAFSHFKIGYSSIDSSDGVERFKTDPSVECFLLHAKAHSSGL 1235 Query: 124 NLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQ 182 NL + + + Q I R+ + G K+ V+ + ++++E + Sbjct: 1236 NLINATH-VFLCEPLINTAIELQAIARV-----HRIGQKQETTVWMYLVSDSVEESIYD 1288 >gi|261334703|emb|CBH17697.1| SNF2 DNA repair protein, putative [Trypanosoma brucei gambiense DAL972] Length = 952 Score = 57.6 bits (138), Expect = 1e-06, Method: Composition-based stats. Identities = 31/165 (18%), Positives = 63/165 (38%), Gaps = 17/165 (10%) Query: 45 EKHWKEVHDEKIKALEVIIEKANAAPIIVAYH---------FNSDLARLQKAFPQGRTLD 95 +W E EKI + ++ + ++ A+H + +D G ++ Sbjct: 439 SDNWIE-SREKILDIVDLLLCKHGKIVLFAHHLNLLDCLTTYVNDKKVTWIRIDGGTPMN 497 Query: 96 KDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTR 155 + +N+G + + +C G+ L G + +F L D+ QQ +R+ Sbjct: 498 SRVELLSRFNDGDVSVALVGITACAVGVRLT-GASCALFAELPPDIGWMQQAEDRL---- 552 Query: 156 QRQAGFKRAVFVYYLIAQNT-IDELVLQRLRTKSTIQDLLLNALK 199 + G K V +YY+I+ + D RL + + +K Sbjct: 553 -HRPGQKNHVILYYIISTGSFFDGAQFSRLSRCFQAVRRITDGVK 596 >gi|302559406|ref|ZP_07311748.1| SNF2 family helicase [Streptomyces griseoflavus Tu4000] gi|302477024|gb|EFL40117.1| SNF2 family helicase [Streptomyces griseoflavus Tu4000] Length = 608 Score = 57.6 bits (138), Expect = 1e-06, Method: Composition-based stats. Identities = 33/150 (22%), Positives = 61/150 (40%), Gaps = 15/150 (10%) Query: 57 KALEVIIEKAN-AAPIIVAYHFNSDLARLQKAFP-------QGRTLDKDPCTIQEWNEGK 108 +AL ++ E A+ +V F + LQ+ G T D++ + + Sbjct: 427 EALAIVAENASLGRKTLVWASFVRSITSLQRLLAPFQPAAVHGGTQDREAELRRFREDPA 486 Query: 109 IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV--F 166 +L ++PA+ G G++L + V+ + Q ++RI + G V Sbjct: 487 CSVLISNPATLGEGISLHQDCHDAVYIDRDFQAGRFLQSLDRI-----HRLGLSPDVETR 541 Query: 167 VYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + L A T+DE+V RL K +L+ Sbjct: 542 ITVLAAAGTVDEIVAMRLAKKLEFMGRILD 571 >gi|19115578|ref|NP_594666.1| ATP-dependent DNA helicase (predicted) [Schizosaccharomyces pombe 972h-] gi|74698449|sp|Q9UTL9|YIV5_SCHPO RecName: Full=Uncharacterized ATP-dependent helicase C144.05 gi|6138896|emb|CAB59685.1| ATP-dependent DNA helicase (predicted) [Schizosaccharomyces pombe] Length = 1375 Score = 57.3 bits (137), Expect = 1e-06, Method: Composition-based stats. Identities = 28/132 (21%), Positives = 48/132 (36%), Gaps = 13/132 (9%) Query: 70 PIIVAYHFNSDLARLQKAFPQGRTL------DKDPCTIQEW-NEGKIPLLFAHPASCGHG 122 ++V + L L K+F + ++ + E + +L H S G Sbjct: 1206 KVVVFSQWLDVLDVLHKSFEANGIVFIRFDGKSKNTCLKRFKEERSLQVLTLHARSQSSG 1265 Query: 123 LNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQ 182 L L + + + Q I R+ + G R FVYY I ++T++ +L Sbjct: 1266 LTLTNATH-VFMCEPLLNSGIEMQAISRV-----HRIGQTRPTFVYYYIVEDTVEGHILN 1319 Query: 183 RLRTKSTIQDLL 194 TK D L Sbjct: 1320 LSLTKHEQLDKL 1331 >gi|224101971|ref|XP_002312496.1| hypothetical protein POPTRDRAFT_657056 [Populus trichocarpa] gi|222852316|gb|EEE89863.1| hypothetical protein POPTRDRAFT_657056 [Populus trichocarpa] Length = 87 Score = 57.3 bits (137), Expect = 1e-06, Method: Composition-based stats. Identities = 13/67 (19%), Positives = 31/67 (46%), Gaps = 5/67 (7%) Query: 131 ILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 +F L ++ + I+R + G + V +Y ++ + T+DE V + + K + Sbjct: 1 YCIFPDLDFNPQ-----IDRQVEDHCHRIGHTKPVTIYRMVTRGTVDETVDEMAKWKLVL 55 Query: 191 QDLLLNA 197 +L++ Sbjct: 56 DAAVLDS 62 >gi|297599954|ref|NP_001048207.2| Os02g0762800 [Oryza sativa Japonica Group] gi|255671267|dbj|BAF10121.2| Os02g0762800 [Oryza sativa Japonica Group] Length = 879 Score = 57.3 bits (137), Expect = 1e-06, Method: Composition-based stats. Identities = 15/67 (22%), Positives = 29/67 (43%), Gaps = 3/67 (4%) Query: 87 AFPQGRTLDKDPCTIQEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEH 144 +++K + ++N+ + + G GLNL GGN L+ F W+ Sbjct: 595 RLDGATSINKRQKLVNQFNDPSRDEFVFLLSSKAGGCGLNL-VGGNRLILFDPDWNPAND 653 Query: 145 QQMIERI 151 +Q+ +R Sbjct: 654 KQVYQRQ 660 >gi|222623720|gb|EEE57852.1| hypothetical protein OsJ_08484 [Oryza sativa Japonica Group] Length = 952 Score = 57.3 bits (137), Expect = 1e-06, Method: Composition-based stats. Identities = 15/67 (22%), Positives = 29/67 (43%), Gaps = 3/67 (4%) Query: 87 AFPQGRTLDKDPCTIQEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEH 144 +++K + ++N+ + + G GLNL GGN L+ F W+ Sbjct: 635 RLDGATSINKRQKLVNQFNDPSRDEFVFLLSSKAGGCGLNL-VGGNRLILFDPDWNPAND 693 Query: 145 QQMIERI 151 +Q+ +R Sbjct: 694 KQVYQRQ 700 >gi|156564053|ref|YP_001429796.1| RecQ helicase [Bacillus phage 0305phi8-36] gi|154622750|gb|ABS83630.1| RecQ helicase [Bacillus phage 0305phi8-36] Length = 624 Score = 57.3 bits (137), Expect = 1e-06, Method: Composition-based stats. Identities = 32/151 (21%), Positives = 57/151 (37%), Gaps = 18/151 (11%) Query: 56 IKALEVIIEKANAAPIIVAYHFNSD---LAR-LQKAFPQGRTLDKDPCTIQE-----WNE 106 I+ ++ I++ N +++ L R + K R + +++E +N Sbjct: 452 IQRVQEIVD--NGHKVVIFVESKRMTVMLHREISKFTRAVRYVGGLKDSVRERRKMKFNT 509 Query: 107 GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA-V 165 + + GLNLQ G L+ + L + +Q RI R+ V Sbjct: 510 DPSCRVLIATGAGSTGLNLQ-AGRYLINYDLPHNPAIWEQRKYRI-----RRLDSTHDRV 563 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + LI Q +DE + +RL K D L Sbjct: 564 HIINLINQGIVDEQMRERLDDKQASFDATLE 594 >gi|46805904|dbj|BAD17217.1| putative DNA repair protein rhp54 [Oryza sativa Japonica Group] Length = 912 Score = 57.3 bits (137), Expect = 1e-06, Method: Composition-based stats. Identities = 15/67 (22%), Positives = 29/67 (43%), Gaps = 3/67 (4%) Query: 87 AFPQGRTLDKDPCTIQEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEH 144 +++K + ++N+ + + G GLNL GGN L+ F W+ Sbjct: 595 RLDGATSINKRQKLVNQFNDPSRDEFVFLLSSKAGGCGLNL-VGGNRLILFDPDWNPAND 653 Query: 145 QQMIERI 151 +Q+ +R Sbjct: 654 KQVYQRQ 660 >gi|317037762|ref|XP_001399104.2| SNF2 family helicase/ATPase [Aspergillus niger CBS 513.88] Length = 1156 Score = 57.3 bits (137), Expect = 1e-06, Method: Composition-based stats. Identities = 29/159 (18%), Positives = 54/159 (33%), Gaps = 16/159 (10%) Query: 54 EKIKALEVII----EKANAAPIIVAYHFNSDLARLQKA---FPQGRTLDKDPCTIQEWN- 105 KI L I E A +V + + L L A F G + IQ + Sbjct: 911 TKIDTLARHILWLREHDPGAKSVVFSQYKNFLEILANALSRFKIGFSSVDAKDGIQNFKS 970 Query: 106 EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 + + H + GLNL + + + Q I R+ + G R Sbjct: 971 DPAVECFLLHAKAHSSGLNLVNATH-VFLCEPLINTAIELQAIARV-----HRIGQHRPT 1024 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIH 204 V+ + +T+++ + ++ ++ KK+ H Sbjct: 1025 TVWMYLVSDTVEQSIYDLSVSRRLAH--IVQKEKKQEKH 1061 >gi|256819717|ref|YP_003140996.1| DNA methylase N-4/N-6 domain-containing protein [Capnocytophaga ochracea DSM 7271] gi|256581300|gb|ACU92435.1| DNA methylase N-4/N-6 domain protein [Capnocytophaga ochracea DSM 7271] Length = 753 Score = 57.3 bits (137), Expect = 1e-06, Method: Composition-based stats. Identities = 32/162 (19%), Positives = 65/162 (40%), Gaps = 15/162 (9%) Query: 45 EKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQE- 103 +K + D++I+A+ I+ ++ A IV + N + ++ + P ++ T + Sbjct: 272 QKELRNTLDQRIEAVAEIVNNSDEA-FIVWVNQNEEEKKVLELIPDAVAVNGSEKTEVKE 330 Query: 104 -----WNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQ 158 + G+ +L G+N Q + +F SL + E Q + R + Sbjct: 331 KKLLGFANGEFRVLVTKKKIAQFGMNFQN-CHNQIFASLDFSFEGTYQAVRR-----SYR 384 Query: 159 AGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKK 200 G + V +Y I +T+ E V Q K + + + K Sbjct: 385 FGQTKEVNIY-FITTDTM-ENVKQTRERKEQQFKEMQDQMNK 424 >gi|225680757|gb|EEH19041.1| DNA repair protein rad5 [Paracoccidioides brasiliensis Pb03] Length = 1432 Score = 57.3 bits (137), Expect = 1e-06, Method: Composition-based stats. Identities = 22/119 (18%), Positives = 41/119 (34%), Gaps = 10/119 (8%) Query: 68 AAPIIVAYHFNSDLARLQKAFPQGRT----LDKDPCTIQEWNEGKIPLLFAHPASCGHGL 123 A IV + L L +AF + +D T + + I H + GL Sbjct: 1188 GAKSIVFSQYKPFLGILARAFSHFKIGFSSIDYHDGTERFKRDPSIECFLLHAKAHSSGL 1247 Query: 124 NLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQ 182 NL + + + Q I R+ + G R V+ + ++++E + Sbjct: 1248 NLVNATH-VFLCEPLINTAIELQAIARV-----HRIGQHRETTVWMYLVSDSVEESIYD 1300 >gi|260905079|ref|ZP_05913401.1| helicase, putative [Brevibacterium linens BL2] Length = 1009 Score = 57.3 bits (137), Expect = 1e-06, Method: Composition-based stats. Identities = 34/169 (20%), Positives = 59/169 (34%), Gaps = 29/169 (17%) Query: 56 IKALEVIIEKANAAPIIVAYH--------FNSDLARLQKAFPQGRTLD----------KD 97 I+ L+ I E A I V + + + G T Sbjct: 831 IEVLDEIREADEKAIIFVISKTVQTRLAVWLHERYGITPKIVNGETKAVASGSKKANLTR 890 Query: 98 PCTIQEWNE-GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 I ++ L+ P + G GL + G N + W+ + Q +RI Sbjct: 891 KGIITDFEAQSGFNLIIMSPLAVGVGLTV-VGANHAIHLERHWNPAKEAQATDRI----- 944 Query: 157 RQAGFKRAVFVYYLIAQN----TIDELVLQRLRTKSTIQDLLLNALKKE 201 + G R V VY +A + + D + LR+K+ ++D ++ K E Sbjct: 945 YRIGQTRPVHVYLPLANHPTLSSFDVNLDALLRSKTDLKDAVVVPGKVE 993 >gi|55376574|ref|YP_134426.1| putative DEAD/H helicase [Haloarcula marismortui ATCC 43049] gi|55229299|gb|AAV44720.1| putative DEAD/H helicase [Haloarcula marismortui ATCC 43049] Length = 1212 Score = 57.3 bits (137), Expect = 1e-06, Method: Composition-based stats. Identities = 27/158 (17%), Positives = 58/158 (36%), Gaps = 29/158 (18%) Query: 65 KANAAPIIVAYHFNSDLARLQKA----FPQGRTLDKD-----------------PCTIQE 103 ++ II+ ++ L +++ P T ++ Sbjct: 788 QSARDNIIIFTQYHDTLEHIRETLTDTHPNVGTYSGGGGMQYDETTGEWVNVGKEAIKRD 847 Query: 104 WNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKR 163 + +G +L S GLNLQ + L+ F L W+ +Q I RI + G K Sbjct: 848 FTDGDTNILIC-TDSASEGLNLQT-ADALINFDLPWNPMRVEQRIGRID-----RIGQKN 900 Query: 164 AVF-VYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKK 200 V + +++ID + + L + + + ++ ++ Sbjct: 901 EVVKIINYAYKDSIDGDIYEELEGRLQLFENVVGPMRP 938 >gi|218515260|ref|ZP_03512100.1| putative helicase/DNA methylase hybrid protein [Rhizobium etli 8C-3] Length = 522 Score = 57.3 bits (137), Expect = 1e-06, Method: Composition-based stats. Identities = 28/108 (25%), Positives = 49/108 (45%), Gaps = 11/108 (10%) Query: 92 RTLDKDPCTIQEW-NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 RT D + + +EG+I + + G+NLQ+ +++V + L W+ + +Q I R Sbjct: 178 RTADMRSALVDYFRDEGQIMIA---TEAGAEGINLQF-CSLVVNYDLPWNPQRVEQRIGR 233 Query: 151 IGVTRQRQAGFKRAVFVYYLIA-QNTIDELVLQRLRTKSTIQDLLLNA 197 + G K V V I +N D+ V Q L K + + + A Sbjct: 234 C-----HRYGQKHDVVVVNFINRKNEADQRVYQLLSEKFRLFEGVFGA 276 >gi|327348280|gb|EGE77137.1| hypothetical protein BDDG_00074 [Ajellomyces dermatitidis ATCC 18188] Length = 1438 Score = 57.3 bits (137), Expect = 1e-06, Method: Composition-based stats. Identities = 21/119 (17%), Positives = 41/119 (34%), Gaps = 10/119 (8%) Query: 68 AAPIIVAYHFNSDLARLQKAFPQGRT----LDKDPCTIQEWNEGKIPLLFAHPASCGHGL 123 A IV + L L +AF + +D + ++ I H + GL Sbjct: 1185 GAKSIVFSQYKPFLGILARAFSHFKIGFSSIDSHDGVERFKSDPSIECFLLHAKAHASGL 1244 Query: 124 NLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQ 182 NL + + + Q I R+ + G R V+ + ++++E + Sbjct: 1245 NLINATH-VFLCEPLINTAIELQAIARV-----HRIGQHRETTVWMYLVSDSVEECIYD 1297 >gi|313905795|ref|ZP_07839154.1| SNF2-related protein [Eubacterium cellulosolvens 6] gi|313469401|gb|EFR64744.1| SNF2-related protein [Eubacterium cellulosolvens 6] Length = 872 Score = 57.3 bits (137), Expect = 1e-06, Method: Composition-based stats. Identities = 26/94 (27%), Positives = 41/94 (43%), Gaps = 10/94 (10%) Query: 105 NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA 164 N KI + GLNLQ+ N ++ + L W+ ++ +Q I R + G K Sbjct: 488 NNAKI---LIVTDAGSEGLNLQF-CNTVINYDLPWNPQKIEQRIGRC-----HRYGQKHD 538 Query: 165 VFVYYLI-AQNTIDELVLQRLRTKSTIQDLLLNA 197 V L+ +N D V + LR K + D + A Sbjct: 539 VVAINLLNTENEADRRVYEILRHKFELFDGVFGA 572 >gi|226292448|gb|EEH47868.1| ATP-dependent DNA helicase [Paracoccidioides brasiliensis Pb18] Length = 1440 Score = 57.3 bits (137), Expect = 1e-06, Method: Composition-based stats. Identities = 22/119 (18%), Positives = 41/119 (34%), Gaps = 10/119 (8%) Query: 68 AAPIIVAYHFNSDLARLQKAFPQGRT----LDKDPCTIQEWNEGKIPLLFAHPASCGHGL 123 A IV + L L +AF + +D T + + I H + GL Sbjct: 1196 GAKSIVFSQYKPFLGILARAFSHFKIGFSSIDYHDGTERFKRDPSIECFLLHAKAHSSGL 1255 Query: 124 NLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQ 182 NL + + + Q I R+ + G R V+ + ++++E + Sbjct: 1256 NLVNATH-VFLCEPLINTAIELQAIARV-----HRIGQHRETTVWMYLVSDSVEESIYD 1308 >gi|22537429|ref|NP_688280.1| SNF2 family protein [Streptococcus agalactiae 2603V/R] gi|22534305|gb|AAN00153.1|AE014250_16 SNF2 family protein [Streptococcus agalactiae 2603V/R] Length = 2274 Score = 57.3 bits (137), Expect = 1e-06, Method: Composition-based stats. Identities = 22/98 (22%), Positives = 40/98 (40%), Gaps = 4/98 (4%) Query: 90 QGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIE 149 T +K ++ N G++ +L A G GLN+Q + + + W + Q Sbjct: 1905 DANTDEKKNSLSRKVNSGEVRILMASTEKGGTGLNVQSRMKAVHYLDVPWRPSDIVQRNG 1964 Query: 150 RIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTK 187 R+ RQ + V +Y+ I + + D + Q K Sbjct: 1965 RLI----RQGNMHQEVDIYHYITKGSFDNYLWQTQENK 1998 >gi|261201348|ref|XP_002627074.1| SNF2 family helicase/ATPase [Ajellomyces dermatitidis SLH14081] gi|239592133|gb|EEQ74714.1| SNF2 family helicase/ATPase [Ajellomyces dermatitidis SLH14081] Length = 1503 Score = 57.3 bits (137), Expect = 1e-06, Method: Composition-based stats. Identities = 21/119 (17%), Positives = 41/119 (34%), Gaps = 10/119 (8%) Query: 68 AAPIIVAYHFNSDLARLQKAFPQGRT----LDKDPCTIQEWNEGKIPLLFAHPASCGHGL 123 A IV + L L +AF + +D + ++ I H + GL Sbjct: 1250 GAKSIVFSQYKPFLGILARAFSHFKIGFSSIDSHDGVERFKSDPSIECFLLHAKAHASGL 1309 Query: 124 NLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQ 182 NL + + + Q I R+ + G R V+ + ++++E + Sbjct: 1310 NLINATH-VFLCEPLINTAIELQAIARV-----HRIGQHRETTVWMYLVSDSVEECIYD 1362 >gi|225562273|gb|EEH10552.1| ATP-dependent DNA helicase [Ajellomyces capsulatus G186AR] Length = 1468 Score = 57.3 bits (137), Expect = 1e-06, Method: Composition-based stats. Identities = 21/119 (17%), Positives = 41/119 (34%), Gaps = 10/119 (8%) Query: 68 AAPIIVAYHFNSDLARLQKAFPQGRT----LDKDPCTIQEWNEGKIPLLFAHPASCGHGL 123 A IV + L L +AF + +D Q + + H + GL Sbjct: 1210 GAKSIVFSQYKPFLGILGRAFSHFKIGYSSIDSSDGVEQFKTDPSVECFLLHAKAHSSGL 1269 Query: 124 NLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQ 182 NL + + + Q I R+ + G K+ V+ + ++++E + Sbjct: 1270 NLINATH-VFLCEPLINTAIELQAIARV-----HRIGQKQETTVWMYLVSDSVEESIYD 1322 >gi|303276775|ref|XP_003057681.1| SNF2 super family [Micromonas pusilla CCMP1545] gi|226460338|gb|EEH57632.1| SNF2 super family [Micromonas pusilla CCMP1545] Length = 509 Score = 57.3 bits (137), Expect = 1e-06, Method: Composition-based stats. Identities = 24/137 (17%), Positives = 41/137 (29%), Gaps = 21/137 (15%) Query: 37 NGAVYYDEEKHWKEVHDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKA-----FP 89 G+ D K L ++ +N +V + L L+KA Sbjct: 381 GGSKSADLGGDPS--ASGKAAFLMDMLRHLASNGHRTLVFSQSRAMLDVLEKAAAAEGHK 438 Query: 90 QGRTLDKDPCT-----IQEWNEG-KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEE 143 R P ++ + IPL G GL L + +V + W+ Sbjct: 439 LVRIDGNVPADERHARVERFQSDASIPLALLTSQVGGLGLTLT-AADRVVIYDPSWNPAS 497 Query: 144 HQQMIERIGVTRQRQAG 160 Q ++R + G Sbjct: 498 DSQSVDR-----AYRIG 509 >gi|156054460|ref|XP_001593156.1| hypothetical protein SS1G_06078 [Sclerotinia sclerotiorum 1980] gi|154703858|gb|EDO03597.1| hypothetical protein SS1G_06078 [Sclerotinia sclerotiorum 1980 UF-70] Length = 1270 Score = 57.3 bits (137), Expect = 1e-06, Method: Composition-based stats. Identities = 29/138 (21%), Positives = 47/138 (34%), Gaps = 14/138 (10%) Query: 54 EKIKALEVII----EKANAAPIIVAYHFNSDLARLQKAFPQGRT----LDKDPCTIQEWN 105 KI L I E + IV F L L +AF R +DK N Sbjct: 1038 TKIDTLARHILYLRESDPGSKSIVFSQFAEFLPILARAFRVFRIGHASIDKPNGIEIFKN 1097 Query: 106 EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 + I + H + GL L ++ + + Q + R+ + G Sbjct: 1098 DPNIEVFLLHSRAHSAGLTLVNASHVFI-CEPLLNTALEIQAVARVD-----RIGQLVDT 1151 Query: 166 FVYYLIAQNTIDELVLQR 183 VY I NT+++ + + Sbjct: 1152 NVYLHIIGNTVEQSIYEL 1169 >gi|6562295|emb|CAB62593.1| putative protein (fragment) [Arabidopsis thaliana] Length = 786 Score = 57.3 bits (137), Expect = 1e-06, Method: Composition-based stats. Identities = 41/195 (21%), Positives = 70/195 (35%), Gaps = 30/195 (15%) Query: 16 QGENIEAFNS-ASKTVKCLQLANGAVYYDEE-------KHWKEVHDEKIKALEVIIEKAN 67 + ++ A NS + K QL Y + W +H + L+ E+ + Sbjct: 479 EAGHVNAENSDGPNSDKENQLCGKLSYQQLGIAKLSAFREWLSLH-PLLSGLDYTPEEID 537 Query: 68 A----APIIVAYHFNSDLARLQKAF---------PQGRTLDKDPC-TIQEWN-EGKIPLL 112 ++V H + L +Q+ G TL +D +Q + ++ + Sbjct: 538 GDRSSTKMVVFAHHHKVLDGIQEFICDKGIGFVRIDGTTLPRDRQLAVQSFQFSSEVKIA 597 Query: 113 FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIA 172 + G GL+ N +VF L Q +R + G AV VY A Sbjct: 598 IIGVEAGGVGLDFSAAQN-VVFLELPKTPSLLLQAEDR-----AHRRGQTSAVNVYIFCA 651 Query: 173 QNTIDELVLQRLRTK 187 ++T+DE Q L K Sbjct: 652 KDTMDESNWQNLNKK 666 >gi|218134948|ref|ZP_03463752.1| hypothetical protein BACPEC_02853 [Bacteroides pectinophilus ATCC 43243] gi|217990333|gb|EEC56344.1| hypothetical protein BACPEC_02853 [Bacteroides pectinophilus ATCC 43243] Length = 403 Score = 57.3 bits (137), Expect = 1e-06, Method: Composition-based stats. Identities = 28/122 (22%), Positives = 52/122 (42%), Gaps = 9/122 (7%) Query: 77 FNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFS 136 + + AR + R ++ ++ + + +L S GLNLQ+ N ++ + Sbjct: 66 YKAWKARNYGKYVGSRNVELKNAIVEAF-RDEYKILLV-TDSGSEGLNLQF-CNTIINYD 122 Query: 137 LWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLI-AQNTIDELVLQRLRTKSTIQDLLL 195 L W+ ++ +Q I R + G K V V L+ QN D+ V + L K + + Sbjct: 123 LPWNPQKIEQRIGRC-----HRYGQKNDVVVINLLNTQNVADKRVYEILSEKFELFQGVF 177 Query: 196 NA 197 A Sbjct: 178 GA 179 >gi|307110846|gb|EFN59081.1| hypothetical protein CHLNCDRAFT_9310 [Chlorella variabilis] Length = 374 Score = 56.9 bits (136), Expect = 1e-06, Method: Composition-based stats. Identities = 23/159 (14%), Positives = 57/159 (35%), Gaps = 23/159 (14%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDE-----KI 56 + QRE+ +G ++ N + ++ + N + + + E K+ Sbjct: 218 ALFRLMQREMQGTGRGG-LKGVN--NVLMEMRNICNHPLISEAALPPHSLPAEVRLCGKL 274 Query: 57 KALEVIIE--KANAAPIIVAYHFNSDLARLQK----------AFPQGRTLDKDPCTIQEW 104 + L+ ++ +A +++ L + G K ++ + Sbjct: 275 ELLDRMLVKLRAGGHKVLLFSTMTRALDVVSDYLGWRGFRHLRLDGGTAAGKRGELVERF 334 Query: 105 NE--GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDL 141 N+ G + + + G GLNLQ G + ++ + W+ Sbjct: 335 NDPGGGVFVFLLSIRAGGVGLNLQ-GADTVIMYDTDWNP 372 >gi|315231610|ref|YP_004072046.1| DNA/RNA helicase [Thermococcus barophilus MP] gi|315184638|gb|ADT84823.1| DNA/RNA helicase [Thermococcus barophilus MP] Length = 952 Score = 56.9 bits (136), Expect = 1e-06, Method: Composition-based stats. Identities = 27/133 (20%), Positives = 49/133 (36%), Gaps = 19/133 (14%) Query: 68 AAPIIVAYHFNSDLARLQKAFPQ-------------GRTLDKDPCTIQEWNEGKIPLLFA 114 I++ + L L+ P+ G+ + + + + Sbjct: 403 GEKIVIFTEYLDTLEYLKNNLPKYLGINETDIVTISGKNKGDVHNIKERFEQENGAKILI 462 Query: 115 HPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQN 174 G GLNLQ N+L+ + W + +Q + RI + G K+ +VY + N Sbjct: 463 ATDVAGEGLNLQV-ANVLINYEAPWSPIKLEQRMGRIW-----RLGQKKESYVYTVFLSN 516 Query: 175 TIDELVLQRLRTK 187 +D VL+ L K Sbjct: 517 KMDRDVLENLYHK 529 >gi|322708293|gb|EFY99870.1| putative protein RIS1 [Metarhizium anisopliae ARSEF 23] Length = 897 Score = 56.9 bits (136), Expect = 1e-06, Method: Composition-based stats. Identities = 15/96 (15%), Positives = 33/96 (34%), Gaps = 7/96 (7%) Query: 95 DKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGV 153 K ++ + + + + G LN+ N ++ WW++ Q R Sbjct: 778 KKKKKALEMFKKSPTTNVFLSGLMAGGQSLNITC-ANRIIIIDPWWNVTSELQAAGRTS- 835 Query: 154 TRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKST 189 + G + +V + D V + ++KS Sbjct: 836 ----RIGQTKKCYVVRIFTSAATDARVAELQKSKSE 867 >gi|117922220|ref|YP_871412.1| SNF2-like protein [Shewanella sp. ANA-3] gi|117614552|gb|ABK50006.1| SNF2-related protein [Shewanella sp. ANA-3] Length = 1148 Score = 56.9 bits (136), Expect = 1e-06, Method: Composition-based stats. Identities = 25/115 (21%), Positives = 46/115 (40%), Gaps = 11/115 (9%) Query: 86 KAFPQGRTLDKDPCTIQEWNEGKIPLLFA-HPASCGHGLNLQYGGNILVFFSLWWDLEEH 144 KA + + I E+ + L P + G GL + G N +V F W+ + Sbjct: 871 KAVVKNKNTANRKSMIAEFEAKEGFNLIIFSPVAAGVGLTV-VGANNVVHFERHWNPAKE 929 Query: 145 QQMIERIGVTRQRQAGFKRAVFVY----YLIAQNTIDELVLQRLRTKSTIQDLLL 195 Q +R+ + G + V VY + + D + + L KS ++D ++ Sbjct: 930 AQATDRV-----YRIGQTKDVNVYVPILHHPTIESFDVNLHRLLSQKSMLKDAVV 979 >gi|159482010|ref|XP_001699066.1| hypothetical protein CHLREDRAFT_177665 [Chlamydomonas reinhardtii] gi|158273129|gb|EDO98921.1| predicted protein [Chlamydomonas reinhardtii] Length = 874 Score = 56.9 bits (136), Expect = 1e-06, Method: Composition-based stats. Identities = 19/86 (22%), Positives = 34/86 (39%), Gaps = 7/86 (8%) Query: 114 AHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQ 173 A G GLNL + +V D Q + R+ + G R V+ + Sbjct: 563 AKLKQGGAGLNLTEAQH-VVLVEPQLDPAAEAQAVGRV-----HRIGQARPTHVHRFVVA 616 Query: 174 NTIDELVLQRLRTKSTIQD-LLLNAL 198 +T++E V + ++ D LL ++ Sbjct: 617 HTVEEQVHRLADNRARGMDLSLLASV 642 >gi|83646357|ref|YP_434792.1| SNF2 family DNA/RNA helicase [Hahella chejuensis KCTC 2396] gi|83634400|gb|ABC30367.1| Superfamily II DNA/RNA helicase, SNF2 family [Hahella chejuensis KCTC 2396] Length = 1003 Score = 56.9 bits (136), Expect = 1e-06, Method: Composition-based stats. Identities = 40/231 (17%), Positives = 78/231 (33%), Gaps = 47/231 (20%) Query: 1 MKQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHW-----------K 49 +K Y E+ + G IE L+L +++D + Sbjct: 770 LKYYD----EVIASVHGRKIEDKRRIVLPS-LLKLKIACIHHDIGSGYTPSNSPKEFLRH 824 Query: 50 EVHDEKIKALEVIIEKANAA--PIIVAYHFNS----------DLARLQKAFPQGRTLD-- 95 + KI+A+ +++ ++V + L ++Q G T Sbjct: 825 AENSIKIQAMLDVLKDIEKRQEKVLVFATSKAVQAYTSALITTLFKIQAPIVNGDTKAVA 884 Query: 96 ------KDPCTIQEWNEGK-IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMI 148 I + K +L P + G GL + G N ++ W+ + Q Sbjct: 885 TPKDDLTRKAIIDRFQSEKGFRVLIMSPIAAGVGLTV-VGANNVIHLERHWNPAKEAQAT 943 Query: 149 ERIGVTRQRQAGFKRAVFVYYLIAQN----TIDELVLQRLRTKSTIQDLLL 195 +R+ + G K+ V VY +A + + D + L K T+ D ++ Sbjct: 944 DRV-----YRIGQKKNVNVYLPMALHPNLSSFDIQLNTLLNNKVTLSDAVV 989 >gi|330933137|ref|XP_003304061.1| hypothetical protein PTT_16483 [Pyrenophora teres f. teres 0-1] gi|311319572|gb|EFQ87831.1| hypothetical protein PTT_16483 [Pyrenophora teres f. teres 0-1] Length = 2131 Score = 56.9 bits (136), Expect = 1e-06, Method: Composition-based stats. Identities = 35/163 (21%), Positives = 66/163 (40%), Gaps = 28/163 (17%) Query: 54 EKIKALEVIIEKA--NAAPIIVAYHFNSD--LARLQKAFP--QGRTLDKDP-CTIQEWNE 106 +KI A+ +I + I+ A + S L R+ T + I+E+ Sbjct: 1907 KKIDAIVELISRMPPTDQGILFAPNNESMRVLERVLDHHEIRYSSTRETGAAQVIEEFKT 1966 Query: 107 GKIPLLFAHP------ASCGHGLNLQYGGNILVFFSLWWDLEEHQ------QMIERIGVT 154 K P G+NL N ++F S + ++++ Q I R Sbjct: 1967 NKEPATMKKLLILDVGDESAAGINL-VNANHVIFVSPLYTEKQYKYESSMAQAIAR---- 2021 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 R+ G + V++Y+++A TID +L+ R K + +++A Sbjct: 2022 -SRRHGQDKRVYIYHVVALRTIDVDILE-QRHKRC--EAMISA 2060 >gi|325089460|gb|EGC42770.1| ATP-dependent DNA helicase [Ajellomyces capsulatus H88] Length = 1490 Score = 56.9 bits (136), Expect = 1e-06, Method: Composition-based stats. Identities = 21/119 (17%), Positives = 41/119 (34%), Gaps = 10/119 (8%) Query: 68 AAPIIVAYHFNSDLARLQKAFPQGRT----LDKDPCTIQEWNEGKIPLLFAHPASCGHGL 123 A IV + L L +AF + +D Q + + H + GL Sbjct: 1251 GAKSIVFSQYKPFLGILGRAFSHFKIGYSSIDSSDGVEQFKTDPSVECFLLHAKAYSSGL 1310 Query: 124 NLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQ 182 NL + + + Q I R+ + G K+ V+ + ++++E + Sbjct: 1311 NLINATH-VFLCEPLINTAIELQAIARV-----HRIGQKQETTVWMYLVSDSVEESIYD 1363 >gi|297736470|emb|CBI25341.3| unnamed protein product [Vitis vinifera] Length = 1717 Score = 56.9 bits (136), Expect = 2e-06, Method: Composition-based stats. Identities = 31/174 (17%), Positives = 61/174 (35%), Gaps = 13/174 (7%) Query: 17 GENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKAL-EVIIEKANAAPIIVAY 75 G IEA +KC + + + V + + A + VA Sbjct: 1491 GTKIEAVTRRILWIKCTEPKAKILVFSSWNDVLNVLEHALNANNITYVRMKGGRKSHVAI 1550 Query: 76 HFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFF 135 + A G+T + P E+ + +L +GLNL + +V Sbjct: 1551 S--HFRRQRTSAEGNGQTHAQQPEPEPEF----VQVLLLLIQHGANGLNLLEAQH-VVLV 1603 Query: 136 SLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKST 189 + Q I R+ + G + V+ I ++T++E + + R+++T Sbjct: 1604 EPLLNPAAEAQAISRV-----HRIGQENRTLVHRFIVKDTVEESIYKLNRSRNT 1652 >gi|326524448|dbj|BAK00607.1| predicted protein [Hordeum vulgare subsp. vulgare] Length = 77 Score = 56.9 bits (136), Expect = 2e-06, Method: Composition-based stats. Identities = 12/57 (21%), Positives = 24/57 (42%), Gaps = 5/57 (8%) Query: 136 SLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQD 192 WW+ Q +RI + G + + + ++T++E +LQ K + D Sbjct: 2 DPWWNPAVESQAQDRI-----HRIGQFKPIRSTRFVIKDTVEERILQLQEKKQLVFD 53 >gi|160894868|ref|ZP_02075642.1| hypothetical protein CLOL250_02418 [Clostridium sp. L2-50] gi|156863299|gb|EDO56730.1| hypothetical protein CLOL250_02418 [Clostridium sp. L2-50] Length = 862 Score = 56.9 bits (136), Expect = 2e-06, Method: Composition-based stats. Identities = 28/122 (22%), Positives = 52/122 (42%), Gaps = 9/122 (7%) Query: 77 FNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFS 136 + + AR + R ++ ++ + + +L S GLNLQ+ N ++ + Sbjct: 453 YKAWKARNYGKYVGSRNVELKNAIVEAF-RDEYKILLV-TDSGSEGLNLQF-CNTIINYD 509 Query: 137 LWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLI-AQNTIDELVLQRLRTKSTIQDLLL 195 L W+ ++ +Q I R + G K V V L+ QN D+ V + L K + + Sbjct: 510 LPWNPQKIEQRIGRC-----HRYGQKNDVVVINLLNTQNVADKRVYEILSEKFELFQGVF 564 Query: 196 NA 197 A Sbjct: 565 GA 566 >gi|196010716|ref|XP_002115222.1| hypothetical protein TRIADDRAFT_59182 [Trichoplax adhaerens] gi|190581993|gb|EDV22067.1| hypothetical protein TRIADDRAFT_59182 [Trichoplax adhaerens] Length = 974 Score = 56.9 bits (136), Expect = 2e-06, Method: Composition-based stats. Identities = 19/110 (17%), Positives = 37/110 (33%), Gaps = 15/110 (13%) Query: 55 KIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAFPQGRTL-----------DKDPCTI 101 K++ L ++E + N ++ L +QK + + + Sbjct: 420 KLQLLADLLENFEINGHRCLIFSQSRKMLNIIQKVVTERGYKMLRIDGTVTKPGRRMELV 479 Query: 102 QEWNEGKIPL-LFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 QE+ L G GLNL + ++ F W+ Q ++R Sbjct: 480 QEFQTNSSYLCFLLTTQVGGVGLNLT-AADRVIIFDPSWNPATDAQAVDR 528 >gi|308274079|emb|CBX30678.1| hypothetical protein N47_E41900 [uncultured Desulfobacterium sp.] Length = 1194 Score = 56.9 bits (136), Expect = 2e-06, Method: Composition-based stats. Identities = 21/82 (25%), Positives = 40/82 (48%), Gaps = 7/82 (8%) Query: 106 EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 + ++ +L A + G G+NLQ +++V + L W+ +Q RI + G Sbjct: 582 DPEVKVLLA-TDAAGEGINLQR-AHLMVNYDLPWNPNRIEQRFGRI-----HRIGQTEVC 634 Query: 166 FVYYLIAQNTIDELVLQRLRTK 187 ++ L+A+ T + V +RL K Sbjct: 635 HLWNLVAEETREGDVYRRLLDK 656 >gi|255547283|ref|XP_002514699.1| ATP binding protein, putative [Ricinus communis] gi|223546303|gb|EEF47805.1| ATP binding protein, putative [Ricinus communis] Length = 1229 Score = 56.9 bits (136), Expect = 2e-06, Method: Composition-based stats. Identities = 31/200 (15%), Positives = 65/200 (32%), Gaps = 37/200 (18%) Query: 10 ELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEV------II 63 E ++ + + L + + ++E+ K+ A +I Sbjct: 475 EALLKFTIHEDNTLHAFTLYLHFLSGCGSFCKLN-KLSYQELGIAKLPAFREWLSIHPLI 533 Query: 64 EKANA----------APIIVAYHFNSDLARLQKAF---------PQGRTLDKDPC-TIQE 103 +++ +I+ H + L +Q+ G TL +D ++ Sbjct: 534 TESDGVAELDVNCISQKMIIFAHHHKVLDGVQELIFEKGIGFVRIDGNTLPRDRQSAVRS 593 Query: 104 WNEGK----IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQA 159 + + + + G GL+ N +VF L Q +R + Sbjct: 594 FQSSNEASIVKIAIIGVTAGGVGLDFSSAQN-VVFLELPQSSSLMLQAEDR-----AHRR 647 Query: 160 GFKRAVFVYYLIAQNTIDEL 179 G AV +Y A++T+DE Sbjct: 648 GQTNAVNIYIFCAKDTVDER 667 >gi|224009261|ref|XP_002293589.1| predicted protein [Thalassiosira pseudonana CCMP1335] gi|220970989|gb|EED89325.1| predicted protein [Thalassiosira pseudonana CCMP1335] Length = 83 Score = 56.9 bits (136), Expect = 2e-06, Method: Composition-based stats. Identities = 19/83 (22%), Positives = 37/83 (44%), Gaps = 1/83 (1%) Query: 98 PCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 I ++ G++ +L + G NLQ N +V EH +E+ + R Sbjct: 2 SRAITDFTTGEVSILLLSAQAKASGANLQCATN-VVLLDPAGSSAEHGATLEQQAIGRAV 60 Query: 158 QAGFKRAVFVYYLIAQNTIDELV 180 + G + AV V + +++I+E + Sbjct: 61 RMGQENAVKVVRFLVKDSIEEDL 83 >gi|323452538|gb|EGB08412.1| hypothetical protein AURANDRAFT_64133 [Aureococcus anophagefferens] Length = 1459 Score = 56.9 bits (136), Expect = 2e-06, Method: Composition-based stats. Identities = 25/161 (15%), Positives = 55/161 (34%), Gaps = 17/161 (10%) Query: 45 EKHWKEVHDEKIKALEVIIEKA---NAAPIIVAYHFNSDLARLQKAFPQGRTL------- 94 + K+ L +E +V + L + A Q Sbjct: 1281 HDRSRVDFGAKLDELADDVEAHVTRKGLKCLVFSSWTDALDLVAVALKQRGVASLALKGG 1340 Query: 95 DKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGV 153 + P ++ + + + L + ++ GLNL ++ F L +L+ E + Sbjct: 1341 KQAPKILEAFKADPHVSALLMNISTNNAGLNLSEATHV---FLLDTNLDH---ARETQAL 1394 Query: 154 TRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 R ++ K V+ + +I++ + Q +K+T L Sbjct: 1395 ARVQRLDSKSETTVHRYVTGGSIEDAIWQLRLSKATAAGEL 1435 >gi|3068759|gb|AAC41305.1| Mi-2 [Xenopus laevis] Length = 410 Score = 56.9 bits (136), Expect = 2e-06, Method: Composition-based stats. Identities = 11/62 (17%), Positives = 26/62 (41%), Gaps = 5/62 (8%) Query: 129 GNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKS 188 + +V + W+ Q +R + G R V +Y + + +++E + Q + K Sbjct: 3 ADTVVIYDSDWNPHNDIQA-----FSRAHRIGQNRKVMIYRFVTRASVEERITQVAKKKM 57 Query: 189 TI 190 + Sbjct: 58 ML 59 >gi|220915713|ref|YP_002491017.1| helicase domain protein [Anaeromyxobacter dehalogenans 2CP-1] gi|219953567|gb|ACL63951.1| helicase domain protein [Anaeromyxobacter dehalogenans 2CP-1] Length = 898 Score = 56.9 bits (136), Expect = 2e-06, Method: Composition-based stats. Identities = 36/191 (18%), Positives = 65/191 (34%), Gaps = 26/191 (13%) Query: 13 CDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKA--NAAP 70 L E + +++ ++ ++ GA + EK KAL + Sbjct: 343 AALLAHLAERYGLSARLIRNRRVKVGAFTSRVLRRVDVGEGEKPKALVDLCAGLARGGEK 402 Query: 71 IIVAYHFNSDLARLQKA-------------FPQGRTLDKDPCTIQEWNEGKIPLLFAHPA 117 ++V F DL L+ + +L+ + + + + P+L Sbjct: 403 VLV---FGGDLEALRGLQGGLAEAGLEALLYDDAPSLEARDRLVARFRDPEGPMLLLSGE 459 Query: 118 SCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 S G G N Q+ + LV L +Q I R+ + G R V ++ + D Sbjct: 460 SGGEGRNFQF-AHHLVCADLPASPLVLEQRIGRLD-----RLGQTRPVEIHVPVEPG--D 511 Query: 178 ELVLQRLRTKS 188 E L L K Sbjct: 512 EAFLADLYEKE 522 >gi|67678171|gb|AAH96935.1| Wu:fd12d03 protein [Danio rerio] Length = 479 Score = 56.9 bits (136), Expect = 2e-06, Method: Composition-based stats. Identities = 9/62 (14%), Positives = 26/62 (41%), Gaps = 5/62 (8%) Query: 129 GNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKS 188 + ++ + W+ Q +R + G + V +Y + + +++E + Q + K Sbjct: 2 ADTVIIYGSDWNPHNDIQA-----FSRAHRIGQNKKVMIYRFVTKASVEERITQVAKKKM 56 Query: 189 TI 190 + Sbjct: 57 ML 58 >gi|300933400|ref|ZP_07148656.1| SNF2-related protein [Corynebacterium resistens DSM 45100] Length = 948 Score = 56.9 bits (136), Expect = 2e-06, Method: Composition-based stats. Identities = 26/104 (25%), Positives = 46/104 (44%), Gaps = 9/104 (8%) Query: 95 DKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 D+ + E+ E L + G+NLQ+ ++LV + L W+ + +Q RIG Sbjct: 482 DRRKALVDEFRERGR--LMIATEAAAEGINLQF-CSMLVNYDLPWNPQRIEQ---RIG-- 533 Query: 155 RQRQAGFKRAVFVYYLIAQNTI-DELVLQRLRTKSTIQDLLLNA 197 R + G K V V + + +E +L+ L K + + A Sbjct: 534 RAHRFGQKHNVVVVNFSNKGNLAEERILELLTEKFELFTSVFGA 577 >gi|210610976|ref|ZP_03288685.1| hypothetical protein CLONEX_00875 [Clostridium nexile DSM 1787] gi|210152201|gb|EEA83208.1| hypothetical protein CLONEX_00875 [Clostridium nexile DSM 1787] Length = 862 Score = 56.9 bits (136), Expect = 2e-06, Method: Composition-based stats. Identities = 28/122 (22%), Positives = 52/122 (42%), Gaps = 9/122 (7%) Query: 77 FNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFS 136 + + AR + R ++ ++ + + +L S GLNLQ+ N ++ + Sbjct: 453 YKAWKARNYGKYVGSRNVELKNAIVEAF-RDEYKILLV-TDSGSEGLNLQF-CNTIINYD 509 Query: 137 LWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLI-AQNTIDELVLQRLRTKSTIQDLLL 195 L W+ ++ +Q I R + G K V V L+ QN D+ V + L K + + Sbjct: 510 LPWNPQKIEQRIGRC-----HRYGQKNDVVVINLLNTQNVADKRVYEILSEKFELFQGVF 564 Query: 196 NA 197 A Sbjct: 565 GA 566 >gi|307110467|gb|EFN58703.1| hypothetical protein CHLNCDRAFT_34017 [Chlorella variabilis] Length = 701 Score = 56.9 bits (136), Expect = 2e-06, Method: Composition-based stats. Identities = 14/47 (29%), Positives = 25/47 (53%) Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + R + G +R V VY L+ + T++E ++ R K + L+NA Sbjct: 570 QAMDRAHRLGQQRTVNVYRLLVRGTVEEQIMSLQRFKLDVAATLVNA 616 >gi|302889034|ref|XP_003043403.1| hypothetical protein NECHADRAFT_87480 [Nectria haematococca mpVI 77-13-4] gi|256724319|gb|EEU37690.1| hypothetical protein NECHADRAFT_87480 [Nectria haematococca mpVI 77-13-4] Length = 939 Score = 56.9 bits (136), Expect = 2e-06, Method: Composition-based stats. Identities = 22/145 (15%), Positives = 52/145 (35%), Gaps = 25/145 (17%) Query: 52 HDEKIKALEVIIEKANAAP--------IIVAYHFNSDLARLQKAFPQGR----------T 93 K++AL I + P ++ + L + A + Sbjct: 772 PSAKVEALLRNISERQQRPGQNSKPNKSVIFSFWTKMLDLIGVALEDKGMKFCRIDGQAS 831 Query: 94 LDKDPCTIQEW-NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIG 152 + + I + N+ + ++ A + G G++L ++ + W+ Q I+R+ Sbjct: 832 MSQRKQAIATFGNDPECNIMLASIGAVGEGIDLVCANSVHI-IEPHWNPMAEAQAIDRV- 889 Query: 153 VTRQRQAGFKRAVFVYYLIAQNTID 177 + G ++ V V I ++I+ Sbjct: 890 ----HRIGQQQEVDVVRYIVNDSIE 910 >gi|323456692|gb|EGB12558.1| hypothetical protein AURANDRAFT_17580 [Aureococcus anophagefferens] Length = 68 Score = 56.9 bits (136), Expect = 2e-06, Method: Composition-based stats. Identities = 12/70 (17%), Positives = 30/70 (42%), Gaps = 6/70 (8%) Query: 111 LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYL 170 + + G+NL N V ++ +Q I R+ + G +R V ++ L Sbjct: 5 IFLLSIRAGACGINLTQ-ANHCVMVEPCTNVALDRQAIGRV-----HRMGQQRDVTIHRL 58 Query: 171 IAQNTIDELV 180 + +++++ + Sbjct: 59 VLRDSVESRM 68 >gi|302839932|ref|XP_002951522.1| hypothetical protein VOLCADRAFT_92108 [Volvox carteri f. nagariensis] gi|300263131|gb|EFJ47333.1| hypothetical protein VOLCADRAFT_92108 [Volvox carteri f. nagariensis] Length = 2115 Score = 56.9 bits (136), Expect = 2e-06, Method: Composition-based stats. Identities = 22/150 (14%), Positives = 48/150 (32%), Gaps = 18/150 (12%) Query: 53 DEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKA----------FPQGRTLDKDPCTIQ 102 ++ L+ + + +V + L +Q+A G + Sbjct: 1940 SALLEELDRMATSDPCSKALVFSSWGRLLRLVQEALLANNVRCASMVGGNPAARQAALQS 1999 Query: 103 EWNEGKIPLLFA--HPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 ++ +L + GL+L + + Q RI + G Sbjct: 2000 FLHDPTCRVLLLLKSHSGGAAGLSLTV-AHTAFMLEPAVNPGLEAQAAARIC-----RLG 2053 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 R V +IA++T+++ VL + K + Sbjct: 2054 QDRPTRVIRIIAKHTVEDRVLAMQQYKQQL 2083 >gi|237830003|ref|XP_002364299.1| helicase, putative [Toxoplasma gondii ME49] gi|211961963|gb|EEA97158.1| helicase, putative [Toxoplasma gondii ME49] gi|221507167|gb|EEE32771.1| helicase, putative [Toxoplasma gondii VEG] Length = 1200 Score = 56.9 bits (136), Expect = 2e-06, Method: Composition-based stats. Identities = 28/139 (20%), Positives = 57/139 (41%), Gaps = 17/139 (12%) Query: 70 PIIVAYHFNSDLARLQKAFPQGRTL---------DKDPCTIQEW-NEGKIPLLFAHPASC 119 I++ + + L LQ A + + D T+ + N+ +L Sbjct: 932 KILIFSEWPAALDLLQVALRRSGVVSLKYLGGHSQADRTTLWYFRNDPHARVLLCSLLRA 991 Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 G GL L + +VF + + E +Q I R+ + KR V+ I +++++E Sbjct: 992 GRGLTLTEATH-VVFLEVPLNHAEEEQAIGRV-----YRMAQKRQTHVWRFIVKDSVEER 1045 Query: 180 VLQ-RLRTKSTIQDLLLNA 197 ++Q R + + + + L A Sbjct: 1046 IVQMRQKPRDGLSERLATA 1064 >gi|313902234|ref|ZP_07835641.1| helicase domain protein [Thermaerobacter subterraneus DSM 13965] gi|313467514|gb|EFR63021.1| helicase domain protein [Thermaerobacter subterraneus DSM 13965] Length = 1205 Score = 56.9 bits (136), Expect = 2e-06, Method: Composition-based stats. Identities = 35/200 (17%), Positives = 74/200 (37%), Gaps = 29/200 (14%) Query: 10 ELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAA 69 + +L+ E + ++ Q ++ W+E+ + ++ EV+ + Sbjct: 478 QTIAELRAEIETLKELEALALRVRQ-------SGTDRKWEEL-SKILQDREVMFDARGHR 529 Query: 70 PIIVAYHFNSDLAR-----LQKAF--PQGRT-------LDKDPCTIQEWNEGKIPLLFAH 115 +V + + D AR +Q P+ ++ + + + + Sbjct: 530 RKLVIFTEHRDTARYLAWRIQTLLGRPEAVVVIEGTMGREERRKAQELFTQDPNVHVLVA 589 Query: 116 PASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNT 175 + G G+NLQ +++V + L W+ +Q RI + G ++ L+AQNT Sbjct: 590 TDAAGEGINLQR-AHLMVNYDLPWNPNRLEQRFGRI-----HRIGQTEVCHLWNLVAQNT 643 Query: 176 IDELVLQRLRTK-STIQDLL 194 + V L K Q L Sbjct: 644 REGEVYLALLRKLEAEQRAL 663 >gi|77163610|ref|YP_342135.1| Type III restriction enzyme, res subunit [Nitrosococcus oceani ATCC 19707] gi|254434998|ref|ZP_05048505.1| Type III restriction enzyme, res subunit family [Nitrosococcus oceani AFC27] gi|76881924|gb|ABA56605.1| Type III restriction enzyme, res subunit [Nitrosococcus oceani ATCC 19707] gi|207088109|gb|EDZ65381.1| Type III restriction enzyme, res subunit family [Nitrosococcus oceani AFC27] Length = 962 Score = 56.9 bits (136), Expect = 2e-06, Method: Composition-based stats. Identities = 24/155 (15%), Positives = 55/155 (35%), Gaps = 24/155 (15%) Query: 49 KEVHDEKIKALEVII------EKANAAPIIVAYHFNSDLARLQKAFPQGRT--------- 93 + D K +AL I E +++ F L++ Sbjct: 474 QAGPDAKAEALIEWIYELQAEENEPDLKVLIFTEFVPTQEMLKEFLEARGISVVTLNGSM 533 Query: 94 -LDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIG 152 ++ + K + + G GLNLQ+ ++++ + + W+ +Q I R+ Sbjct: 534 DMEVRGAAQDTF--RKSHRVLLSTDAGGEGLNLQF-AHVIINYDIPWNPMRLEQRIGRVD 590 Query: 153 VTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTK 187 + G + V + +++++ V + L K Sbjct: 591 -----RIGQPKMVRAINFVFEDSVEFRVREVLEQK 620 >gi|87301587|ref|ZP_01084427.1| possible helicase [Synechococcus sp. WH 5701] gi|87283804|gb|EAQ75758.1| possible helicase [Synechococcus sp. WH 5701] Length = 538 Score = 56.9 bits (136), Expect = 2e-06, Method: Composition-based stats. Identities = 31/174 (17%), Positives = 62/174 (35%), Gaps = 29/174 (16%) Query: 23 FNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKA--NAAPIIVAYHFNSD 80 S + Q+ GA Y K+ A + ++ + A ++V F + Sbjct: 358 AESLAMLTALRQI--GAAY-------------KVPAAQALVTQLLVGGAAVVVFTAFVAP 402 Query: 81 LARLQKAFPQGRTLDK-----DPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFF 135 RL + + ++ + G++PLL A A G G L + + +V Sbjct: 403 AERLAASLGGAVLTGRLKPPERQRQVERFQAGRVPLLVATFAVAGLGFTL-HRASHVVLL 461 Query: 136 SLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKST 189 W + +Q +R + G + ++L D+LV + +K+ Sbjct: 462 ERPWTPGDTEQAEDR-----AHRIGMAGPLTAHWLQL-GVADQLVDGLIASKAE 509 >gi|224127900|ref|XP_002329205.1| hypothetical protein POPTRDRAFT_266879 [Populus trichocarpa] gi|222870986|gb|EEF08117.1| hypothetical protein POPTRDRAFT_266879 [Populus trichocarpa] Length = 166 Score = 56.5 bits (135), Expect = 2e-06, Method: Composition-based stats. Identities = 18/90 (20%), Positives = 38/90 (42%), Gaps = 6/90 (6%) Query: 102 QEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGF 161 Q+ I +L +GLNL + +V + Q + R+ + G Sbjct: 23 QQQETKSIQVLLLLIQHGANGLNLLEAQH-VVLVEPLLNPAAEAQAVSRV-----HRIGQ 76 Query: 162 KRAVFVYYLIAQNTIDELVLQRLRTKSTIQ 191 ++ V+ I ++T++E + + R++ST Sbjct: 77 EQRTLVHRFIVKDTVEESIYKLNRSRSTSS 106 >gi|221487370|gb|EEE25602.1| hypothetical protein TGGT1_086760 [Toxoplasma gondii GT1] Length = 1213 Score = 56.5 bits (135), Expect = 2e-06, Method: Composition-based stats. Identities = 28/139 (20%), Positives = 57/139 (41%), Gaps = 17/139 (12%) Query: 70 PIIVAYHFNSDLARLQKAFPQGRTL---------DKDPCTIQEW-NEGKIPLLFAHPASC 119 I++ + + L LQ A + + D T+ + N+ +L Sbjct: 944 KILIFSEWPAALDLLQVALRRSGVVSLKYLGGHSQADRTTLWYFRNDPHARVLLCSLLRA 1003 Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 G GL L + +VF + + E +Q I R+ + KR V+ I +++++E Sbjct: 1004 GRGLTLTEATH-VVFLEVPLNHAEEEQAIGRV-----YRMAQKRQTHVWRFIVKDSVEER 1057 Query: 180 VLQ-RLRTKSTIQDLLLNA 197 ++Q R + + + + L A Sbjct: 1058 IVQMRQKPRDGLSERLATA 1076 >gi|260801152|ref|XP_002595460.1| hypothetical protein BRAFLDRAFT_69293 [Branchiostoma floridae] gi|229280706|gb|EEN51472.1| hypothetical protein BRAFLDRAFT_69293 [Branchiostoma floridae] Length = 650 Score = 56.5 bits (135), Expect = 2e-06, Method: Composition-based stats. Identities = 18/112 (16%), Positives = 35/112 (31%), Gaps = 15/112 (13%) Query: 53 DEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQKAFPQ------------GRTLDKDP 98 K L ++E+ +V L +QK + D+D Sbjct: 30 SGKTCVLVELLERLKEEGHQTLVFSQSRKMLDIIQKILKSRGFKVMRIDGTITKLEDRDK 89 Query: 99 CTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 + ++ + G GLNL + +V + W+ Q ++R Sbjct: 90 RIRRFQSDPSWSVFLLTTQVGGVGLNLT-AADRVVIYDPSWNPATDAQAVDR 140 >gi|115474095|ref|NP_001060646.1| Os07g0680500 [Oryza sativa Japonica Group] gi|33146657|dbj|BAC80003.1| SNF2/SWI2 family transcription factor-like protein [Oryza sativa Japonica Group] gi|50509527|dbj|BAD31220.1| SNF2/SWI2 family transcription factor-like protein [Oryza sativa Japonica Group] gi|113612182|dbj|BAF22560.1| Os07g0680500 [Oryza sativa Japonica Group] gi|215687240|dbj|BAG91805.1| unnamed protein product [Oryza sativa Japonica Group] Length = 184 Score = 56.5 bits (135), Expect = 2e-06, Method: Composition-based stats. Identities = 17/79 (21%), Positives = 34/79 (43%), Gaps = 6/79 (7%) Query: 110 PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYY 169 +L +GLNL + ++ + Q I RI + G ++ F++ Sbjct: 37 QVLLMLIQHGANGLNLLEAQH-VILVEPLLNPAAEAQAISRI-----HRVGQDKSTFIHR 90 Query: 170 LIAQNTIDELVLQRLRTKS 188 I +NTI+E + + R ++ Sbjct: 91 FIVKNTIEESIYKLNRGRA 109 >gi|283781192|ref|YP_003371947.1| helicase domain-containing protein [Pirellula staleyi DSM 6068] gi|283439645|gb|ADB18087.1| helicase domain protein [Pirellula staleyi DSM 6068] Length = 949 Score = 56.5 bits (135), Expect = 2e-06, Method: Composition-based stats. Identities = 39/193 (20%), Positives = 74/193 (38%), Gaps = 31/193 (16%) Query: 13 CDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEK--ANAAP 70 DL ++A + + L +A A + D K+ + I+++ + Sbjct: 434 ADLADLEENESDAAKERKRLLDMARAA------DKLEGDGDPKLVQMVPIVKRLVSEGHR 487 Query: 71 IIVAYHFNSDLA----RLQKAFPQGRTL---------DKDPCTIQEWNEGKIPLLFAHPA 117 I+ F + +L++ P+G T+ + IQE + +L Sbjct: 488 PILFCRFIATAEYLAEQLRQRLPKGVTVIAVTGQIPPSEREARIQEMRNHEQYVLVC-TD 546 Query: 118 SCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA---VFVYYLIAQN 174 G+NLQ+ + ++ + L W+ H+Q R+ + G + V YY N Sbjct: 547 CLSEGINLQHLFDSVIHYDLSWNPTRHEQREGRVD-----RFGQPKPEVKVLTYY-GTDN 600 Query: 175 TIDELVLQRLRTK 187 ID +VL+ L K Sbjct: 601 QIDGVVLEVLIRK 613 >gi|242786466|ref|XP_002480811.1| SNF2 family helicase/ATPase, putative [Talaromyces stipitatus ATCC 10500] gi|218720958|gb|EED20377.1| SNF2 family helicase/ATPase, putative [Talaromyces stipitatus ATCC 10500] Length = 1481 Score = 56.5 bits (135), Expect = 2e-06, Method: Composition-based stats. Identities = 25/128 (19%), Positives = 45/128 (35%), Gaps = 10/128 (7%) Query: 59 LEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRT---LDKDPCTIQEW-NEGKIPLLFA 114 L + E A IV + L L AF + + + IQ++ + Sbjct: 1243 LMWLREHDPGAKSIVFSQYRDFLGVLANAFSRFKIGFSSVEAKNGIQKFKEDAAAECFLL 1302 Query: 115 HPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQN 174 H + GLNL + + + Q I R+ + G R V+ + + Sbjct: 1303 HARAHSSGLNLVNATH-VFLCEPLINTAIELQAIARV-----HRIGQHRPTTVWMYLVSD 1356 Query: 175 TIDELVLQ 182 T++E + Q Sbjct: 1357 TVEESIYQ 1364 >gi|254805307|ref|YP_003083528.1| putative DEAD/DEAH box helicase [Neisseria meningitidis alpha14] gi|254668849|emb|CBA06913.1| putative DEAD/DEAH box helicase [Neisseria meningitidis alpha14] Length = 932 Score = 56.5 bits (135), Expect = 2e-06, Method: Composition-based stats. Identities = 36/209 (17%), Positives = 81/209 (38%), Gaps = 20/209 (9%) Query: 1 MKQYHKFQRELYCDLQGENI-EAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKAL 59 +K + + + D + + A ++A +K L A A+ + E K + E + Sbjct: 361 LKHFKQLAENIREDAKSRALLTALSTAFTKLKELGAAQKAIIFTESKRTQAYLLECLAQT 420 Query: 60 EVIIEKANAAPIIVAYHFNSDLARLQKAFPQ----------GRTLDKDPCTIQEWNEGKI 109 + E + + + + ++ K + + +T D ++ + E Sbjct: 421 DYAGENGDGIVLFNGTNSDPQAQKIYKNWLKRHEGSDKITGSKTADTRAALVEHFKERGT 480 Query: 110 PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYY 169 + + G+NLQ+ ++++ + L W+ + +Q I R + G K V V Sbjct: 481 --IMIATEAGAEGINLQF-CSLIINYDLPWNPQRVEQRIGRC-----HRYGQKHDVVVVN 532 Query: 170 LIAQ-NTIDELVLQRLRTKSTIQDLLLNA 197 + + N D+ V + L K + D + A Sbjct: 533 FVDETNEADQRVYELLEQKFKLFDGVFGA 561 >gi|159481869|ref|XP_001698997.1| SWI/SNF2 superfamily protein [Chlamydomonas reinhardtii] gi|158273260|gb|EDO99051.1| SWI/SNF2 superfamily protein [Chlamydomonas reinhardtii] Length = 531 Score = 56.5 bits (135), Expect = 2e-06, Method: Composition-based stats. Identities = 11/55 (20%), Positives = 23/55 (41%), Gaps = 6/55 (10%) Query: 111 LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 + + + G G+NL + + WW+ +Q ++R+ + G R V Sbjct: 476 VFLSSLKAGGVGMNLT-AASAVHLMDPWWNPAVEEQAMDRV-----HRLGQTRDV 524 >gi|78355826|ref|YP_387275.1| DEAD/DEAH box helicase-like [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] gi|78218231|gb|ABB37580.1| DEAD/DEAH box helicase-like protein [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] Length = 665 Score = 56.5 bits (135), Expect = 2e-06, Method: Composition-based stats. Identities = 22/113 (19%), Positives = 46/113 (40%), Gaps = 9/113 (7%) Query: 86 KAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQ 145 R +D ++ + + + + G+NLQ+ +++V + L W+ + + Sbjct: 464 GRISGSRPIDVRTALVEHFRDNAQ--IMIATEAAAEGVNLQF-CSLIVNYDLPWNPQRIE 520 Query: 146 QMIERIGVTRQRQAGFKRAVFVYYLIA-QNTIDELVLQRLRTKSTIQDLLLNA 197 Q I R + G K V V + +N D+ V + L K + + + A Sbjct: 521 QRIGRC-----HRYGQKHDVVVVNFLNERNAADQRVYELLEHKFNLFNGVFGA 568 >gi|21229999|ref|NP_635916.1| helicase [Xanthomonas campestris pv. campestris str. ATCC 33913] gi|66766875|ref|YP_241637.1| helicase [Xanthomonas campestris pv. campestris str. 8004] gi|188989950|ref|YP_001901960.1| putative DNA-binding protein [Xanthomonas campestris pv. campestris str. B100] gi|21111516|gb|AAM39840.1| helicase [Xanthomonas campestris pv. campestris str. ATCC 33913] gi|66572207|gb|AAY47617.1| helicase [Xanthomonas campestris pv. campestris str. 8004] gi|167731710|emb|CAP49888.1| putative DNA-binding protein [Xanthomonas campestris pv. campestris] Length = 967 Score = 56.5 bits (135), Expect = 2e-06, Method: Composition-based stats. Identities = 28/107 (26%), Positives = 50/107 (46%), Gaps = 9/107 (8%) Query: 92 RTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERI 151 RT D ++ + + + + + G G+NLQ+ ++LV + L W+ + +Q I RI Sbjct: 507 RTADMKAAVVEAFRDHRD--VLITTEAGGEGINLQF-CSLLVNYDLPWNPQRVEQRIGRI 563 Query: 152 GVTRQRQAGFKRAVFVYYLIA-QNTIDELVLQRLRTKSTIQDLLLNA 197 + G K V V + +N D+LV + L K + D + A Sbjct: 564 -----HRYGQKSDVVVVNFVNRKNRADQLVFELLEKKFKLFDGVFGA 605 >gi|163848249|ref|YP_001636293.1| helicase domain-containing protein [Chloroflexus aurantiacus J-10-fl] gi|222526160|ref|YP_002570631.1| helicase domain-containing protein [Chloroflexus sp. Y-400-fl] gi|163669538|gb|ABY35904.1| helicase domain protein [Chloroflexus aurantiacus J-10-fl] gi|222450039|gb|ACM54305.1| helicase domain protein [Chloroflexus sp. Y-400-fl] Length = 1189 Score = 56.5 bits (135), Expect = 2e-06, Method: Composition-based stats. Identities = 23/93 (24%), Positives = 43/93 (46%), Gaps = 7/93 (7%) Query: 95 DKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 ++ Q ++ + +L A + G G+NLQ +++V + L W+ +Q RI Sbjct: 567 ERRKAQEQFLHDPAVRVLVA-TDAAGEGINLQR-AHLMVNYDLPWNPNRLEQRFGRI--- 621 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTK 187 + G F++ L+A T + V +RL K Sbjct: 622 --HRIGQTEVCFLWNLVADETREGDVYRRLLDK 652 >gi|116198109|ref|XP_001224866.1| hypothetical protein CHGG_07210 [Chaetomium globosum CBS 148.51] gi|88178489|gb|EAQ85957.1| hypothetical protein CHGG_07210 [Chaetomium globosum CBS 148.51] Length = 1480 Score = 56.5 bits (135), Expect = 2e-06, Method: Composition-based stats. Identities = 24/120 (20%), Positives = 38/120 (31%), Gaps = 10/120 (8%) Query: 68 AAPIIVAYHFNSDLARLQKAFPQGRT----LDKDPCTIQEWNEGKIPLLFAHPASCGHGL 123 A IV + L L AF + R DK + + H + GL Sbjct: 1261 GAKSIVFSQYKEFLDVLALAFRRYRIGYTSFDKAHGIAIFKEDPGTEVFLLHARAHASGL 1320 Query: 124 NLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQR 183 NL N + + Q I R+ + G + V+ I T++E + Sbjct: 1321 NL-VNANHVFLCEPLLNTALELQAIARVD-----RIGQQHGTTVWLYIVDGTVEESIHDL 1374 >gi|293190852|ref|ZP_06609014.1| helicase/SNF2 domain protein [Actinomyces odontolyticus F0309] gi|292820751|gb|EFF79713.1| helicase/SNF2 domain protein [Actinomyces odontolyticus F0309] Length = 955 Score = 56.5 bits (135), Expect = 2e-06, Method: Composition-based stats. Identities = 24/104 (23%), Positives = 45/104 (43%), Gaps = 9/104 (8%) Query: 95 DKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 D+ + E+ + L + G+NLQ+ ++LV + L W+ + +Q I R+ Sbjct: 489 DRRKALVDEFRKRGR--LMIATEAAAEGINLQF-CSMLVNYDLPWNPQRVEQRIGRV--- 542 Query: 155 RQRQAGFKRAVFVYYLIAQNTI-DELVLQRLRTKSTIQDLLLNA 197 + G K V V + + +E +LQ L K + + A Sbjct: 543 --HRFGQKHNVIVVNFSNKGNVAEERILQLLTEKFKLFTSVFGA 584 >gi|240275731|gb|EER39244.1| DNA repair protein RAD8 [Ajellomyces capsulatus H143] Length = 219 Score = 56.5 bits (135), Expect = 2e-06, Method: Composition-based stats. Identities = 29/164 (17%), Positives = 63/164 (38%), Gaps = 19/164 (11%) Query: 45 EKHWKEVHDEKIKALEVIIEK----ANAAPIIVAYHFNSDLARLQKAFPQG-------RT 93 K W+E K+ L +++ A +++ F + A + Sbjct: 21 GKKWQEYGGTKLLELTRLVQDTERIAEDEQVLLFIQFPDLMEAASAALQKANIPHLMISV 80 Query: 94 LDKDPCT-IQEWNEG----KIPLLFAHPAS-CGHGLNLQYGGNILVFFSL-WWDLEEHQQ 146 D+ + I E+ + +L H GLNLQ +++ F L ++ Sbjct: 81 NDRTSSSKIAEFQTRAEKVESKVLILHLGDVSASGLNLQNANHVIFFHPLFTKSQYDYNS 140 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 + + R R+ G ++ V +Y+ +A TI+ + ++ R + + Sbjct: 141 GMA-QAIGRSRRYGQQKHVHIYHFLALKTIEVNIFEQRRRERLV 183 >gi|297607570|ref|NP_001060181.2| Os07g0598300 [Oryza sativa Japonica Group] gi|255677946|dbj|BAF22095.2| Os07g0598300 [Oryza sativa Japonica Group] Length = 1158 Score = 56.5 bits (135), Expect = 2e-06, Method: Composition-based stats. Identities = 26/126 (20%), Positives = 45/126 (35%), Gaps = 8/126 (6%) Query: 82 ARLQKAFPQGRTLDKDPCT-IQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWW 139 R++ G T ++ + + ++ + + G GL+ N +VF L Sbjct: 547 QRIKYVRIDGSTSPRERKDAVDSFRLNPEVMVAIIGITAGGVGLDFSSAQN-VVFVELPK 605 Query: 140 DLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 E Q +R + G AV +Y A+NT+DE L L+N K Sbjct: 606 SASELLQAEDR-----AHRRGQTNAVNIYIFCARNTLDESHWLHLNQSLFRVSSLMNGKK 660 Query: 200 KETIHV 205 + Sbjct: 661 DAIREI 666 >gi|222637395|gb|EEE67527.1| hypothetical protein OsJ_24993 [Oryza sativa Japonica Group] Length = 1174 Score = 56.5 bits (135), Expect = 2e-06, Method: Composition-based stats. Identities = 26/126 (20%), Positives = 45/126 (35%), Gaps = 8/126 (6%) Query: 82 ARLQKAFPQGRTLDKDPCT-IQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWW 139 R++ G T ++ + + ++ + + G GL+ N +VF L Sbjct: 583 QRIKYVRIDGSTSPRERKDAVDSFRLNPEVMVAIIGITAGGVGLDFSSAQN-VVFVELPK 641 Query: 140 DLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 E Q +R + G AV +Y A+NT+DE L L+N K Sbjct: 642 SASELLQAEDR-----AHRRGQTNAVNIYIFCARNTLDESHWLHLNQSLFRVSSLMNGKK 696 Query: 200 KETIHV 205 + Sbjct: 697 DAIREI 702 >gi|218199966|gb|EEC82393.1| hypothetical protein OsI_26740 [Oryza sativa Indica Group] Length = 1165 Score = 56.5 bits (135), Expect = 2e-06, Method: Composition-based stats. Identities = 26/126 (20%), Positives = 45/126 (35%), Gaps = 8/126 (6%) Query: 82 ARLQKAFPQGRTLDKDPCT-IQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWW 139 R++ G T ++ + + ++ + + G GL+ N +VF L Sbjct: 583 QRIKYVRIDGSTSPRERKDAVDSFRLNPEVMVAIIGITAGGVGLDFSSAQN-VVFVELPK 641 Query: 140 DLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 E Q +R + G AV +Y A+NT+DE L L+N K Sbjct: 642 SASELLQAEDR-----AHRRGQTNAVNIYIFCARNTLDESHWLHLNQSLFRVSSLMNGKK 696 Query: 200 KETIHV 205 + Sbjct: 697 DAIREI 702 >gi|34393589|dbj|BAC83216.1| putative DNA helicase [Oryza sativa Japonica Group] Length = 1029 Score = 56.5 bits (135), Expect = 2e-06, Method: Composition-based stats. Identities = 26/126 (20%), Positives = 45/126 (35%), Gaps = 8/126 (6%) Query: 82 ARLQKAFPQGRTLDKDPCT-IQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWW 139 R++ G T ++ + + ++ + + G GL+ N +VF L Sbjct: 418 QRIKYVRIDGSTSPRERKDAVDSFRLNPEVMVAIIGITAGGVGLDFSSAQN-VVFVELPK 476 Query: 140 DLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 E Q +R + G AV +Y A+NT+DE L L+N K Sbjct: 477 SASELLQAEDR-----AHRRGQTNAVNIYIFCARNTLDESHWLHLNQSLFRVSSLMNGKK 531 Query: 200 KETIHV 205 + Sbjct: 532 DAIREI 537 >gi|156034667|ref|XP_001585752.1| hypothetical protein SS1G_13268 [Sclerotinia sclerotiorum 1980] gi|154698672|gb|EDN98410.1| hypothetical protein SS1G_13268 [Sclerotinia sclerotiorum 1980 UF-70] Length = 1092 Score = 56.5 bits (135), Expect = 2e-06, Method: Composition-based stats. Identities = 25/157 (15%), Positives = 54/157 (34%), Gaps = 28/157 (17%) Query: 45 EKHWKEVHDEKIKALEV------IIEKANAAPIIVAYHFNSDLARLQKAFP--------- 89 K+ L I+E IIV Y + + +A Sbjct: 862 GSTIISTASSKLSYLMDQIFLHHILE-----KIIVFYEAENVGYYIAQALKCMNVEHLLY 916 Query: 90 --QGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQM 147 + T ++ C ++ + ++ GL++ + + F + + + +Q Sbjct: 917 SKRDSTSERSKCVVKFNSLPNFRVMLMDVNQAAFGLDM-SAASRVYFVNPVFSPQIEEQA 975 Query: 148 IERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRL 184 I+R + G V V L+ + +I+E++L R Sbjct: 976 IKR-----AHRIGQLHPVHVETLVLKGSIEEVILTRR 1007 >gi|75759222|ref|ZP_00739323.1| SWF/SNF family helicase [Bacillus thuringiensis serovar israelensis ATCC 35646] gi|74493285|gb|EAO56400.1| SWF/SNF family helicase [Bacillus thuringiensis serovar israelensis ATCC 35646] Length = 68 Score = 56.5 bits (135), Expect = 2e-06, Method: Composition-based stats. Identities = 13/50 (26%), Positives = 26/50 (52%) Query: 148 IERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 +E R + G KR V V+ LI T++E + + L K ++ + ++ + Sbjct: 1 MENQATDRAYRIGQKRFVHVHKLITTGTLEEKIDEMLERKQSLNNAVITS 50 >gi|328545242|ref|YP_004305351.1| Helicase domain protein [Polymorphum gilvum SL003B-26A1] gi|326414984|gb|ADZ72047.1| Helicase domain protein [Polymorphum gilvum SL003B-26A1] Length = 1170 Score = 56.5 bits (135), Expect = 2e-06, Method: Composition-based stats. Identities = 38/218 (17%), Positives = 71/218 (32%), Gaps = 33/218 (15%) Query: 5 HKFQRELYCDLQGENIEAFNSA----------SKTVKCLQLANGAVYYDEEKHWKEVHDE 54 E L+ I+ +A + A V +++ W E+ Sbjct: 426 DDLSAEEQESLEENLIDDATAAKTVVELEAEIVILKGLEEQAKAVVASGQDRKWDEL-SR 484 Query: 55 KIKALEVIIEKANA-APIIVAYHFNSDLARLQKAFPQ-------------GRTLDKDPCT 100 ++ + A II+ L L G D+ Sbjct: 485 ILQNHPETRDAAGRQRKIIIFSEHRDTLNYLHARIAGVLGNPDAIVTIHGGTHRDERRRL 544 Query: 101 IQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQA 159 + + + +L A + G G+NLQ N++V + L W+ +Q RI + Sbjct: 545 QALFRSDPDVRVLVA-TDAAGEGVNLQN-ANLMVNYDLPWNPNRLEQRFGRI-----HRI 597 Query: 160 GFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 G ++ L+A+ T + V RL K ++ L+ Sbjct: 598 GQTEVCHLWNLVAKETREGDVYHRLLLKLEVESQALHG 635 >gi|323448985|gb|EGB04877.1| hypothetical protein AURANDRAFT_1482 [Aureococcus anophagefferens] Length = 411 Score = 56.5 bits (135), Expect = 2e-06, Method: Composition-based stats. Identities = 28/141 (19%), Positives = 53/141 (37%), Gaps = 19/141 (13%) Query: 60 EVIIEKANA-APIIVAYHFNSDLARLQKAFPQGRTL------------DKDPCTIQEWNE 106 E E N IIV H L RL+ F + + ++ + + Sbjct: 277 EHFFEDDNDTQKIIVFAHHREVLDRLEAGFQKIKGATTIRVDGSVPGAQREERIKRFKTD 336 Query: 107 GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVF 166 + +C +GLN+ + ++F + W +H Q +RI + A Sbjct: 337 ATCRVALLSMGTCSNGLNMTE-ASTILFAEMTWSPTDHMQAEDRI-----HRVSQTNACN 390 Query: 167 VYYLIAQNTIDELVLQRLRTK 187 +YY + N++ + +RL+ K Sbjct: 391 IYYAMLPNSLGSFMFRRLQAK 411 >gi|254521535|ref|ZP_05133590.1| SNF2-related [Stenotrophomonas sp. SKA14] gi|219719126|gb|EED37651.1| SNF2-related [Stenotrophomonas sp. SKA14] Length = 582 Score = 56.5 bits (135), Expect = 2e-06, Method: Composition-based stats. Identities = 22/112 (19%), Positives = 45/112 (40%), Gaps = 11/112 (9%) Query: 95 DKDPCTIQEWNEGKIPLLFAHPASCGHGLN-LQYGGNILVFFSLWWDLEEHQQMIERIGV 153 ++ + + G ++ S G++ LQ+ + +VF L W H+Q I R+ Sbjct: 443 NQKQAAKEAFIAGDSQVMLISLRSGA-GIDGLQHVCSTVVFGELDWSPGVHEQCIGRV-- 499 Query: 154 TRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIHV 205 + G V Y+L++ + D +V L K + ++ H+ Sbjct: 500 ---HRDGQAEPVMAYFLLSDSGSDPIVSDVLGVKREQ----IEGVRSPGEHL 544 >gi|224139698|ref|XP_002323233.1| hypothetical protein POPTRDRAFT_576142 [Populus trichocarpa] gi|222867863|gb|EEF04994.1| hypothetical protein POPTRDRAFT_576142 [Populus trichocarpa] Length = 97 Score = 56.5 bits (135), Expect = 2e-06, Method: Composition-based stats. Identities = 19/69 (27%), Positives = 30/69 (43%), Gaps = 5/69 (7%) Query: 137 LWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 WW+ + +Q I + G K V + LIAQN+I+E +L+ K + Sbjct: 21 PWWNSADEEQAI-----NCVHRYGQKENVRIVRLIAQNSIEERILEMQERKKLASEAFGR 75 Query: 197 ALKKETIHV 205 +KE V Sbjct: 76 QGQKERREV 84 >gi|169609236|ref|XP_001798037.1| hypothetical protein SNOG_07705 [Phaeosphaeria nodorum SN15] gi|111064051|gb|EAT85171.1| hypothetical protein SNOG_07705 [Phaeosphaeria nodorum SN15] Length = 822 Score = 56.5 bits (135), Expect = 2e-06, Method: Composition-based stats. Identities = 36/212 (16%), Positives = 74/212 (34%), Gaps = 34/212 (16%) Query: 8 QRELYCDLQGENI-EAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKA 66 +++ + + + + K ++ + + + E ++ +E I++ Sbjct: 605 EKDSEAEFVDTEVVDEKSRKIWLNKVREMT-------DREIFSHKVREVLECIENIVD-M 656 Query: 67 NAAPIIVAYHFN--SD-----LARLQKAFPQGRTLDKDPCTIQEWNEGK----------- 108 I+V F D L R + A G + + T Sbjct: 657 EQQDIVVFTTFLMFHDIISEALYRSKWAHKAGVEVLRFDGTTSSQERADRKLQFETKTTF 716 Query: 109 IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVY 168 ++ A P + G+GL L ++L WW+ ER +R + G V V+ Sbjct: 717 TKIMLATPGAGGYGLELSTAQHVLQL-EPWWNHN-----KERQAWSRTHRQGNLNPVTVW 770 Query: 169 YLIAQNT-IDELVLQRLRTKSTIQDLLLNALK 199 A N+ ID L L K+ + + ++ L+ Sbjct: 771 RFSASNSLIDSLFLAIAGKKTIVNESVMKYLR 802 >gi|222640173|gb|EEE68305.1| hypothetical protein OsJ_26567 [Oryza sativa Japonica Group] Length = 776 Score = 56.5 bits (135), Expect = 2e-06, Method: Composition-based stats. Identities = 21/141 (14%), Positives = 50/141 (35%), Gaps = 22/141 (15%) Query: 66 ANAAPIIVAYHFNSDLARLQKAFPQ------GRTL---------DKDPCTIQEWN-EGKI 109 + ++ + + L++ + G+ + + + ++N Sbjct: 596 SAGEKLVAFSQYTLPMKFLERLLVKEMGWHVGKEIFVINGDTSMEDGQLAMDQFNGSADA 655 Query: 110 PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYY 169 +LF + G G++L I++ + R + + G K+ VFVY Sbjct: 656 KVLFGSIKAFGEGISLVGASRIVILD------VHLNPSVTRQAIGSTFRPGQKKKVFVYR 709 Query: 170 LIAQNTIDELVLQRLRTKSTI 190 L+A ++ +E + K I Sbjct: 710 LVAADSPEEKAHETAFNKEVI 730 >gi|40253498|dbj|BAD05447.1| putative SNF2 domain/helicase domain-containing protein [Oryza sativa Japonica Group] gi|40253701|dbj|BAD05643.1| putative SNF2 domain/helicase domain-containing protein [Oryza sativa Japonica Group] Length = 769 Score = 56.5 bits (135), Expect = 2e-06, Method: Composition-based stats. Identities = 21/141 (14%), Positives = 50/141 (35%), Gaps = 22/141 (15%) Query: 66 ANAAPIIVAYHFNSDLARLQKAFPQ------GRTL---------DKDPCTIQEWN-EGKI 109 + ++ + + L++ + G+ + + + ++N Sbjct: 589 SAGEKLVAFSQYTLPMKFLERLLVKEMGWHVGKEIFVINGDTSMEDGQLAMDQFNGSADA 648 Query: 110 PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYY 169 +LF + G G++L I++ + R + + G K+ VFVY Sbjct: 649 KVLFGSIKAFGEGISLVGASRIVILD------VHLNPSVTRQAIGSTFRPGQKKKVFVYR 702 Query: 170 LIAQNTIDELVLQRLRTKSTI 190 L+A ++ +E + K I Sbjct: 703 LVAADSPEEKAHETAFNKEVI 723 >gi|240047625|ref|YP_002961013.1| hypothetical protein MCJ_005050 [Mycoplasma conjunctivae HRC/581] gi|239985197|emb|CAT05210.1| HYPOTHETICAL PROTEIN MCJ_005050 [Mycoplasma conjunctivae] Length = 400 Score = 56.5 bits (135), Expect = 2e-06, Method: Composition-based stats. Identities = 34/191 (17%), Positives = 73/191 (38%), Gaps = 15/191 (7%) Query: 1 MKQYHKFQRELYCDLQGENIEAFNSASK---TVKCLQLANGAVYYDEEKHWKEVHDEKIK 57 +K+Y E I NS + +LA+G + E + V + KI Sbjct: 197 VKEYKYMVEAPQEYFAKEKITFNNSKLEMQDLTNLRKLASG-ILIGENRKATIVSNYKIN 255 Query: 58 ALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNE---GKIPLLFA 114 ++ +I+ + Y+FN +L ++++ + + + + ++ ++ Sbjct: 256 YIKKLIQP--KTNYCIFYNFNEELEMIKESLSKFKIFEINKTKVELQEALKYEDNFIIAI 313 Query: 115 HPASCGHGLN-LQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQ 173 G L+ ++FS + E+ Q RI + G K+ V YY+ + Sbjct: 314 QYKWGARGFKGLENKVFNQIYFSPSLNKEDFWQSYIRI-----YRPGQKQEVNFYYIAGK 368 Query: 174 NTIDELVLQRL 184 N+I+ + L Sbjct: 369 NSIELAIYHHL 379 >gi|320588566|gb|EFX01034.1| snf2 family helicase [Grosmannia clavigera kw1407] Length = 935 Score = 56.5 bits (135), Expect = 2e-06, Method: Composition-based stats. Identities = 25/120 (20%), Positives = 41/120 (34%), Gaps = 10/120 (8%) Query: 68 AAPIIVAYHFNSDLARLQKAFPQ---GRTLDKDPCTIQEW-NEGKIPLLFAHPASCGHGL 123 IV F L L +AF G + D I ++ + I H + GL Sbjct: 717 GTKAIVFSQFPEFLVILAQAFTHYHIGFSRFSDCDGIAKFKEDPSIECFLLHARAHSSGL 776 Query: 124 NLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQR 183 NL N ++ + Q I R+ + G + V+ I T++E + Sbjct: 777 NL-VNANHVILCEPLVNTALELQAIARV-----HRIGQENETTVWLYIVDGTVEESIYNL 830 >gi|212528896|ref|XP_002144605.1| SNF2 family helicase, putative [Penicillium marneffei ATCC 18224] gi|210074003|gb|EEA28090.1| SNF2 family helicase, putative [Penicillium marneffei ATCC 18224] Length = 2140 Score = 56.5 bits (135), Expect = 2e-06, Method: Composition-based stats. Identities = 30/154 (19%), Positives = 60/154 (38%), Gaps = 15/154 (9%) Query: 54 EKIKALEVIIEKANAAP----IIVAYHFNSDLARLQKAF--------PQGRTLDKDPCTI 101 K+ AL +++ + P +I+ F + AF G T + I Sbjct: 1960 TKVDALVGLLKDESLIPKEDQVILFLQFPDLEETVTAAFQLHNISYVSVGTTGRRGRNRI 2019 Query: 102 QEWNEGKIPLLFAHPAS-CGHGLNLQYGGNILVFFSLWWDLEEHQ-QMIERIGVTRQRQA 159 + + + H + GLNLQ N ++FF+ + ++ Q R + Sbjct: 2020 KTFAGHDKKVAILHLGTENAAGLNLQN-ANHVIFFAPFAAKSHYEYQSTITQSSGRVIRF 2078 Query: 160 GFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDL 193 G K+ V ++ L+ NT++ +LQ + ++ Sbjct: 2079 GQKKEVHIWNLVTLNTLEVGILQGQDGRVLVRRA 2112 >gi|302339016|ref|YP_003804222.1| DNA methylase N-4/N-6 domain protein [Spirochaeta smaragdinae DSM 11293] gi|301636201|gb|ADK81628.1| DNA methylase N-4/N-6 domain protein [Spirochaeta smaragdinae DSM 11293] Length = 837 Score = 56.5 bits (135), Expect = 2e-06, Method: Composition-based stats. Identities = 27/169 (15%), Positives = 68/169 (40%), Gaps = 13/169 (7%) Query: 43 DEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQ 102 D + +E ++ + II+ + I+ + ++ ++KA P+ R + + Sbjct: 289 DASREKRESIYVRVAKMREIIDADPDSHYIIWHDLEAERHAIKKALPESRWIYGSQKEEE 348 Query: 103 E------WNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 +++GK L P G G N QY + +F + + + Q + RI Sbjct: 349 RAENAIGFSDGKFKYLSTKPEISGSGANFQYHCHKAIFLGIGYKFNDFIQAVHRI----- 403 Query: 157 RQAGFKRAVFVYYLIAQN--TIDELVLQRLRTKSTIQDLLLNALKKETI 203 + V ++ + ++ +I E ++ + + D++ ++K + Sbjct: 404 YRFLQSEQVEIHIIYTESERSIYETLMHKWEQHRRLVDMMTEIVRKYGL 452 >gi|85857884|ref|YP_460086.1| SNF2 family DNA/RNA helicase [Syntrophus aciditrophicus SB] gi|85720975|gb|ABC75918.1| superfamily II DNA/RNA helicase, SNF2 family [Syntrophus aciditrophicus SB] Length = 1193 Score = 56.1 bits (134), Expect = 3e-06, Method: Composition-based stats. Identities = 20/82 (24%), Positives = 39/82 (47%), Gaps = 7/82 (8%) Query: 106 EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 + ++ +L A + G G+NLQ +++V + L W+ +Q RI + G Sbjct: 582 DPEVQVLLA-TDAAGEGINLQR-AHLMVNYDLPWNPNRIEQRFGRI-----HRIGQTEVC 634 Query: 166 FVYYLIAQNTIDELVLQRLRTK 187 ++ L+A T + V ++L K Sbjct: 635 HLWNLVADETREGDVYRKLLDK 656 >gi|222622622|gb|EEE56754.1| hypothetical protein OsJ_06290 [Oryza sativa Japonica Group] Length = 148 Score = 56.1 bits (134), Expect = 3e-06, Method: Composition-based stats. Identities = 22/96 (22%), Positives = 42/96 (43%), Gaps = 6/96 (6%) Query: 95 DKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 D++ Q N +LF +CG G++L G + ++ + + +Q I R Sbjct: 10 DREVAMDQFNNSADAKVLFGSIKACGEGISL-VGASRVIILDVHLNPSVTRQAIGR---- 64 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 + G ++ VFVY L+A ++ + + K I Sbjct: 65 -AFRPGQQKKVFVYRLVAADSPEVKFHETAFKKEVI 99 >gi|147860973|emb|CAN82939.1| hypothetical protein VITISV_013126 [Vitis vinifera] Length = 2416 Score = 56.1 bits (134), Expect = 3e-06, Method: Composition-based stats. Identities = 31/174 (17%), Positives = 61/174 (35%), Gaps = 13/174 (7%) Query: 17 GENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKAL-EVIIEKANAAPIIVAY 75 G IEA +KC + + + V + + A + VA Sbjct: 2190 GTKIEAVTRRILWIKCTEPKAKILVFSSWNDVLNVLEHALNANNITYVRMKGGRKSHVAI 2249 Query: 76 HFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFF 135 + A G+T + P E+ + +L +GLNL + +V Sbjct: 2250 S--HFRRQRTSAEGNGQTHAQQPEPEPEF----VQVLLLLIQHGANGLNLLEAQH-VVLV 2302 Query: 136 SLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKST 189 + Q I R+ + G + V+ I ++T++E + + R+++T Sbjct: 2303 EPLLNPAAEAQAISRV-----HRIGQENRTLVHRFIVKDTVEESIYKLNRSRNT 2351 >gi|331245308|ref|XP_003335291.1| hypothetical protein PGTG_17071 [Puccinia graminis f. sp. tritici CRL 75-36-700-3] gi|309314281|gb|EFP90872.1| hypothetical protein PGTG_17071 [Puccinia graminis f. sp. tritici CRL 75-36-700-3] Length = 2163 Score = 56.1 bits (134), Expect = 3e-06, Method: Composition-based stats. Identities = 30/163 (18%), Positives = 61/163 (37%), Gaps = 15/163 (9%) Query: 55 KIKALEVIIEKA-NAAPIIVAYHFNSDLARLQKAFP---------QGRTLDKDPCTIQEW 104 K++ + +I++ ++V F+ L ++ A +G L++ Sbjct: 1994 KLERMCHLIKQLKEDDRVLVFVQFSDLLDKVYDALEARGIGVARVKGTALNQMKVMSNFQ 2053 Query: 105 NE--GKIPLLFAH-PASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGF 161 NE I +L H S G NL L+ + + E + R R+ G Sbjct: 2054 NEVDPHIRVLLLHATDSSASGANLTNANYAFFVSPLFLPTADKFKACETQAIGRLRRYGQ 2113 Query: 162 KRAVFVYYLIAQNTIDELVLQRL--RTKSTIQDLLLNALKKET 202 + V V ++ +TID + ++K + + + A K + Sbjct: 2114 MKKVHVIRMLTVDTIDTQIYGFRHDKSKEVLAEEIELARKNQA 2156 >gi|167832513|gb|ACA01823.1| hypothetical protein VPI2_0006c [Vibrio cholerae] Length = 1041 Score = 56.1 bits (134), Expect = 3e-06, Method: Composition-based stats. Identities = 21/115 (18%), Positives = 50/115 (43%), Gaps = 11/115 (9%) Query: 86 KAFPQGRTLDKDPCTIQEWNEGK-IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEH 144 KA + +++ I ++ + L+ P + G GL + G N +V +W+ + Sbjct: 871 KAVAKRKSVPTRKSMISDFEAKEGFNLIVMSPVAAGVGLTV-VGANHVVHLERYWNPAKE 929 Query: 145 QQMIERIGVTRQRQAGFKRAVFVY----YLIAQNTIDELVLQRLRTKSTIQDLLL 195 Q +R+ + G ++ V +Y + + D + + L K+ ++D ++ Sbjct: 930 AQATDRV-----YRIGQEKEVHIYIPLLHHPEFESFDVNLHRLLTQKTLLKDAVV 979 >gi|116072526|ref|ZP_01469793.1| putative DEAD/H helicase [Synechococcus sp. BL107] gi|116065048|gb|EAU70807.1| putative DEAD/H helicase [Synechococcus sp. BL107] Length = 1076 Score = 56.1 bits (134), Expect = 3e-06, Method: Composition-based stats. Identities = 27/146 (18%), Positives = 61/146 (41%), Gaps = 12/146 (8%) Query: 56 IKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAH 115 + AL+ ++ A ++ F + + + L++ T + + EG +L Sbjct: 780 VDALKELLISAERTSLMA---FTGRGGEILQKGGVWKALNR-EATKRGFKEGNAEILLCT 835 Query: 116 PASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA-VFVYYLIAQN 174 A+ GLN Q+ G L+ + + W+ +Q I RI + G + + L Sbjct: 836 DAAA-EGLNFQFCGA-LINYDMPWNPMRVEQRIGRID-----RIGQTHEQMQIVNLHLDG 888 Query: 175 TIDELVLQRLRTKSTIQDLLLNALKK 200 T++ V + L+ + + + ++ L+ Sbjct: 889 TVEADVYRALKGRIAMFEQVVGKLQP 914 >gi|25029457|ref|NP_739511.1| putative ATP-dependent helicase [Corynebacterium efficiens YS-314] gi|259508359|ref|ZP_05751259.1| ATP-dependent helicase [Corynebacterium efficiens YS-314] gi|23494746|dbj|BAC19711.1| putative ATP-dependent helicase [Corynebacterium efficiens YS-314] gi|259164029|gb|EEW48583.1| ATP-dependent helicase [Corynebacterium efficiens YS-314] Length = 941 Score = 56.1 bits (134), Expect = 3e-06, Method: Composition-based stats. Identities = 32/173 (18%), Positives = 58/173 (33%), Gaps = 20/173 (11%) Query: 43 DEEKHWKEVHDEKIKALEVIIEKAN---AAP--IIVAYHFNSDLARLQKAFPQ------- 90 D + H K AL + + +P ++V + L L++ + Sbjct: 410 DLNEQITPYHSNKYNALVNYLTEIGVKKGSPTRVVVFSERVATLHWLRENLIKNLKLPAA 469 Query: 91 -------GRTLDKDPCTIQEWNEGKIPL-LFAHPASCGHGLNLQYGGNILVFFSLWWDLE 142 G +K + ++ PL + G+NL + LV + + W L Sbjct: 470 AVEVMHGGLPDEKQMQLVDDFKRTDSPLRILVTGDVASEGVNLHTLCHHLVHYDIPWSLI 529 Query: 143 EHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 QQ RI QR + + ++ + VL RL + + LL Sbjct: 530 RIQQRNGRIDRYGQRNNPQITTLLLEPSDSEGIGEIKVLTRLMEREYEANKLL 582 >gi|332159200|ref|YP_004424479.1| ATP-dependent RNA helicase HepA, putative [Pyrococcus sp. NA2] gi|331034663|gb|AEC52475.1| ATP-dependent RNA helicase HepA, putative [Pyrococcus sp. NA2] Length = 1029 Score = 56.1 bits (134), Expect = 3e-06, Method: Composition-based stats. Identities = 35/151 (23%), Positives = 65/151 (43%), Gaps = 23/151 (15%) Query: 53 DEKIKALEVIIEK--ANAAPIIVAYHFNSDLARL-----QKAFPQGRTL--------DKD 97 D K K L I+++ +I+ + L L +K P+ TL +KD Sbjct: 389 DTKAKELLKIVDEHLEKGNKVIIFTEYLDTLFYLNEILGEKYGPERVTLIYGSMKPEEKD 448 Query: 98 PCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 + W E +L A + G L+LQ N+++ + + W+ + Q I R+ Sbjct: 449 ESVRKLWAEDGASILIA-TDAAGESLDLQ-AANVVINYEIPWNPVVYIQRIGRV-----Y 501 Query: 158 QAGFKRAV-FVYYLIAQNTIDELVLQRLRTK 187 + G K+ V F+Y ++ ++ VL+ + K Sbjct: 502 RYGQKKPVIFIYGILPVFKVERRVLEVVLDK 532 >gi|115374698|ref|ZP_01461975.1| helicase [Stigmatella aurantiaca DW4/3-1] gi|115368269|gb|EAU67227.1| helicase [Stigmatella aurantiaca DW4/3-1] Length = 937 Score = 56.1 bits (134), Expect = 3e-06, Method: Composition-based stats. Identities = 24/112 (21%), Positives = 47/112 (41%), Gaps = 9/112 (8%) Query: 87 AFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 + T ++ ++++ + + GLNLQ+ N++V + L W+ + +Q Sbjct: 500 SGDVASTPEERRALVEDFRHRMQ--ILICTEAGAEGLNLQF-CNLVVNYDLPWNPQRVEQ 556 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIA-QNTIDELVLQRLRTKSTIQDLLLNA 197 I R + G +R V V + QN D + + L K + D + A Sbjct: 557 RIGRC-----HRYGQQRDVLVINFLNRQNAADARLFELLEKKLNLFDGVFGA 603 >gi|325680385|ref|ZP_08159938.1| helicase C-terminal domain protein [Ruminococcus albus 8] gi|324107908|gb|EGC02171.1| helicase C-terminal domain protein [Ruminococcus albus 8] Length = 943 Score = 56.1 bits (134), Expect = 3e-06, Method: Composition-based stats. Identities = 40/173 (23%), Positives = 61/173 (35%), Gaps = 24/173 (13%) Query: 27 SKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQK 86 S+ K L+L + Y K D++I IE +A DL K Sbjct: 419 SRYTKLLELLRSSEYNWNPKKV----DDRIVIFTERIETMK----FLAKQLREDLHMSDK 470 Query: 87 ---AFPQGRTLDKDPCTIQEWNEGKIPL-LFAHPASCGHGLNLQYGGNILVFFSLWWDLE 142 G T + ++E+ + P+ + GLNL Y + L+ F + W L Sbjct: 471 QVVEISGGMTDMEQQRVVEEFGRTEAPVRILVASDVASEGLNLHYLSHRLIHFDIPWSLM 530 Query: 143 EHQQMIERIGVTRQRQAGFKRAVFVYYLIA------QNTIDELVLQRLRTKST 189 QQ RI Q KR Y LI+ + D +++ L K Sbjct: 531 VFQQRNGRIDRYGQ----EKRPDIRYMLISSKNERIKG--DMRIIRILVEKEE 577 >gi|302421852|ref|XP_003008756.1| conserved hypothetical protein [Verticillium albo-atrum VaMs.102] gi|261351902|gb|EEY14330.1| conserved hypothetical protein [Verticillium albo-atrum VaMs.102] Length = 2359 Score = 56.1 bits (134), Expect = 3e-06, Method: Composition-based stats. Identities = 36/159 (22%), Positives = 63/159 (39%), Gaps = 19/159 (11%) Query: 32 CLQLANGAVYYDEEKHWKEVHDEKIKA-LEVIIEKANAAPIIVAYHFNSDLARLQKAFPQ 90 C +A A+ D+EK V ++K+KA L + + + + + + D ++ Sbjct: 753 CSAMARSAL--DDEKALLFVSNKKLKAQLFDALAEDDNVDVYMTTGTHHDTDAIRYF--- 807 Query: 91 GRTLDKDPCTIQEWNEGKIPLLFAHPASC-GHGLNLQYGGNILVFFSLWWDLEEHQQMIE 149 + GK +L S G NL N ++F + + M Sbjct: 808 ----------KEPNENGKTKVLVQSLMSEESAGTNLTE-ANHVMFAAPLHTDRRNHYMYM 856 Query: 150 RIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQ-RLRTK 187 R R + G R V VY+ + +T++ VL+ RLR K Sbjct: 857 RQARGRAIRFGQTRPVKVYHFVTAHTMEVDVLEHRLRHK 895 Score = 55.3 bits (132), Expect = 5e-06, Method: Composition-based stats. Identities = 38/181 (20%), Positives = 70/181 (38%), Gaps = 18/181 (9%) Query: 10 ELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKA-LEVIIEKANA 68 +L ++ ++K +K L + V D+EK V ++K+KA L + + + Sbjct: 2114 QLISATAASTLDFEGKSAKVMKILDVIRTDV-KDDEKALLFVSNKKLKAQLFDALAEDDN 2172 Query: 69 APIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASC-GHGLNLQY 127 + + + D ++ + GK +L S G NL Sbjct: 2173 VDVYMTTGTHHDTDAIRYF-------------KEPNENGKTKVLVQSLMSEESAGTNLTE 2219 Query: 128 GGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQ-RLRT 186 N ++F + + M R R + G R V VY+ + +T++ VL+ RLR Sbjct: 2220 -ANHVMFAAPLHTDRRNHYMYMRQARGRAIRFGQTRPVKVYHFVTAHTMEVDVLEHRLRH 2278 Query: 187 K 187 K Sbjct: 2279 K 2279 >gi|197121019|ref|YP_002132970.1| SNF2-related protein [Anaeromyxobacter sp. K] gi|196170868|gb|ACG71841.1| SNF2-related protein [Anaeromyxobacter sp. K] Length = 892 Score = 56.1 bits (134), Expect = 3e-06, Method: Composition-based stats. Identities = 34/178 (19%), Positives = 62/178 (34%), Gaps = 26/178 (14%) Query: 26 ASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLAR 83 +++ ++ ++ GA + EK KAL + ++V F DL Sbjct: 350 SARLIRNRRVKVGAFTSRVLRRVDVGEGEKPKALVDLCAGLARGGEKVLV---FGGDLEA 406 Query: 84 LQKA-------------FPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGN 130 L+ + +L+ + + + + P+L S G G N Q+ + Sbjct: 407 LRGLQGGLAEAGLEALLYDDAPSLEARDRLVARFRDPEGPMLLLSGESGGEGRNFQF-AH 465 Query: 131 ILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKS 188 LV L +Q I R+ + G R V ++ + DE L L K Sbjct: 466 HLVCADLPASPLVLEQRIGRLD-----RLGQTRPVEIHVPVEPG--DEAFLADLYEKE 516 >gi|53802914|ref|YP_115393.1| DEAD-box ATP dependent DNA helicase [Methylococcus capsulatus str. Bath] gi|53756675|gb|AAU90966.1| ATP-dependent RNA helicase, DEAD/DEAH box family [Methylococcus capsulatus str. Bath] Length = 1212 Score = 56.1 bits (134), Expect = 3e-06, Method: Composition-based stats. Identities = 26/108 (24%), Positives = 47/108 (43%), Gaps = 8/108 (7%) Query: 91 GRTLDKDPCTIQEW-NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIE 149 G ++ + + N+ + +L A + G G+NLQ N++V + L W+ +Q Sbjct: 570 GVKREERRKVQELFRNDPAVRVLVA-TDAAGEGVNLQN-ANLMVNYDLPWNPNRLEQRFG 627 Query: 150 RIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 RI + G ++ ++A T + V QRL K I+ L Sbjct: 628 RI-----HRIGQTEVCHLWNMVASETREGDVFQRLFEKLEIERQALGG 670 >gi|310822711|ref|YP_003955069.1| Helicase/SNF2 domain-containing protein [Stigmatella aurantiaca DW4/3-1] gi|309395783|gb|ADO73242.1| Helicase/SNF2 domain protein [Stigmatella aurantiaca DW4/3-1] Length = 926 Score = 56.1 bits (134), Expect = 3e-06, Method: Composition-based stats. Identities = 24/112 (21%), Positives = 47/112 (41%), Gaps = 9/112 (8%) Query: 87 AFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 + T ++ ++++ + + GLNLQ+ N++V + L W+ + +Q Sbjct: 489 SGDVASTPEERRALVEDFRHRMQ--ILICTEAGAEGLNLQF-CNLVVNYDLPWNPQRVEQ 545 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIA-QNTIDELVLQRLRTKSTIQDLLLNA 197 I R + G +R V V + QN D + + L K + D + A Sbjct: 546 RIGRC-----HRYGQQRDVLVINFLNRQNAADARLFELLEKKLNLFDGVFGA 592 >gi|212543375|ref|XP_002151842.1| SNF2 family helicase/ATPase, putative [Penicillium marneffei ATCC 18224] gi|210066749|gb|EEA20842.1| SNF2 family helicase/ATPase, putative [Penicillium marneffei ATCC 18224] Length = 1479 Score = 56.1 bits (134), Expect = 3e-06, Method: Composition-based stats. Identities = 25/128 (19%), Positives = 43/128 (33%), Gaps = 10/128 (7%) Query: 59 LEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCT---IQEW-NEGKIPLLFA 114 L + E A IV + L L AF + + IQ + + Sbjct: 1240 LMWLREHDPGAKSIVFSQYRDFLGVLATAFSRFKIGYSSVEAKDGIQRFKEDPAAECFLL 1299 Query: 115 HPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQN 174 H + GLNL + + + Q I R+ + G R V+ + + Sbjct: 1300 HARAHSSGLNLVNATH-VFLCEPLINTAIELQAIARV-----HRIGQHRPTTVWMYLVSD 1353 Query: 175 TIDELVLQ 182 T++E + Q Sbjct: 1354 TVEESIYQ 1361 >gi|323447772|gb|EGB03682.1| hypothetical protein AURANDRAFT_8383 [Aureococcus anophagefferens] Length = 88 Score = 56.1 bits (134), Expect = 3e-06, Method: Composition-based stats. Identities = 16/93 (17%), Positives = 34/93 (36%), Gaps = 12/93 (12%) Query: 80 DLARLQKAFPQGRTLDKDPCTIQEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSL 137 D R++ + ++ + + + + G+NL N +V F Sbjct: 6 DFFRIEGSVAAAE----RQKMVEAFEADGARARVFLLSTKAGNMGINL-VAANRVVLFDA 60 Query: 138 WWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYL 170 W+ I+R + R + G + V++Y L Sbjct: 61 CWN-----PAIDRQALFRCFRYGQTKHVYIYRL 88 >gi|301299740|ref|ZP_07205990.1| SNF2 family N-terminal domain protein [Lactobacillus salivarius ACS-116-V-Col5a] gi|300852671|gb|EFK80305.1| SNF2 family N-terminal domain protein [Lactobacillus salivarius ACS-116-V-Col5a] Length = 628 Score = 56.1 bits (134), Expect = 3e-06, Method: Composition-based stats. Identities = 42/207 (20%), Positives = 88/207 (42%), Gaps = 27/207 (13%) Query: 15 LQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVH--DEKIKALEVIIEKANAAPII 72 + G++ +ASK K Q ++ VY E D IK + ++ + ++ Sbjct: 412 IDGDSYSWDQNASKIEKENQ-SDIEVYKRFSLEDIETPKFDRGIKLITDLV--SEGKKVL 468 Query: 73 VAYHFNSDLARLQKAFPQ---------GRTLDKD-PCTIQEWNEGKIPLLFAHPASCGHG 122 V F + ++++ + G T +D I E+ +G +L ++P + G Sbjct: 469 VWGMFVGTMHKIKRYLDEKGLNTILVYGETPKQDREELINEFRDGAAQVLISNPNTLGES 528 Query: 123 LNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNT------I 176 ++L + V+F ++L Q +RI + R YYL+++ I Sbjct: 529 ISLHQTVHDAVYFEYNFNLTFMLQSRDRINRLGLPDNQYTR---YYYLMSKGDVAHQSFI 585 Query: 177 DELVLQRLRTKSTIQDLLLNALKKETI 203 DE+V +RL+ K + +++A++ + Sbjct: 586 DEMVYRRLKEKEQV---MMDAIEGPML 609 >gi|254848876|ref|ZP_05238226.1| helicase [Vibrio cholerae MO10] gi|254844581|gb|EET22995.1| helicase [Vibrio cholerae MO10] Length = 718 Score = 56.1 bits (134), Expect = 3e-06, Method: Composition-based stats. Identities = 21/115 (18%), Positives = 50/115 (43%), Gaps = 11/115 (9%) Query: 86 KAFPQGRTLDKDPCTIQEWNEGK-IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEH 144 KA + +++ I ++ + L+ P + G GL + G N +V +W+ + Sbjct: 440 KAVAKRKSVPTRKSMISDFEAKEGFNLIVMSPVAAGVGLTV-VGANHVVHLERYWNPAKE 498 Query: 145 QQMIERIGVTRQRQAGFKRAVFVY----YLIAQNTIDELVLQRLRTKSTIQDLLL 195 Q +R+ + G ++ V +Y + + D + + L K+ ++D ++ Sbjct: 499 AQATDRV-----YRIGQEKEVHIYIPLLHHPEFESFDVNLHRLLTQKTLLKDAVV 548 >gi|290960098|ref|YP_003491280.1| DNA-binding protein [Streptomyces scabiei 87.22] gi|260649624|emb|CBG72739.1| putative DNA-binding protein [Streptomyces scabiei 87.22] Length = 584 Score = 56.1 bits (134), Expect = 3e-06, Method: Composition-based stats. Identities = 32/140 (22%), Positives = 55/140 (39%), Gaps = 10/140 (7%) Query: 64 EKANAAPIIVAYHFNSDLARLQKAFPQ-------GRTLDKDPCTIQEWNEGKIPLLFAHP 116 +V F L L + + G T D+D + + +L ++P Sbjct: 413 NAEQGRKTLVWTTFVRSLTTLAQMLEKFGPAVVYGGTPDRDEQLRRFREDPSCMVLISNP 472 Query: 117 ASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTI 176 A+ G G++L + + V+ + Q ++RI G V V + A+NTI Sbjct: 473 ATLGEGISLHHVCHDAVYVDRDFMAGRFLQSLDRIHRLGL-APGTDTHVTV--IAARNTI 529 Query: 177 DELVLQRLRTKSTIQDLLLN 196 DE+V RL K +L+ Sbjct: 530 DEVVEIRLDQKLEFMGKILD 549 >gi|302665555|ref|XP_003024387.1| SNF2 family helicase, putative [Trichophyton verrucosum HKI 0517] gi|291188439|gb|EFE43776.1| SNF2 family helicase, putative [Trichophyton verrucosum HKI 0517] Length = 2047 Score = 56.1 bits (134), Expect = 3e-06, Method: Composition-based stats. Identities = 30/175 (17%), Positives = 63/175 (36%), Gaps = 22/175 (12%) Query: 37 NGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAP----IIVAYHFNSDLARLQKAFPQGR 92 ++ + + K A+ ++E P +++ F + KA Sbjct: 1835 CHPEWHTQTDKLAKYGSSKFTAVIELLEDTEKVPADDQVLLFIQFPELMDAASKALEAAS 1894 Query: 93 TL-------DKDPCT-IQEWNEGKIPL----LFAHPAS-CGHGLNLQYGGNILVFFSL-- 137 D+ P + I E+ GK + L + GLNLQ N ++FF Sbjct: 1895 IPHTVIQPGDRTPTSKISEFQNGKESVKSKVLILNLGDVTASGLNLQN-ANHIIFFGPLV 1953 Query: 138 WWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQD 192 ++ + + R R+ G + V +Y+++A ++ + + R K + Sbjct: 1954 ARSQYDYDSGMA-QAIGRSRRYGQLKHVHIYHVLALRRVEVNIFE-QRRKQYLAK 2006 >gi|147675032|ref|YP_001217302.1| hypothetical protein VC0395_A1359 [Vibrio cholerae O395] gi|146316915|gb|ABQ21454.1| hypothetical protein VC0395_A1359 [Vibrio cholerae O395] gi|227013661|gb|ACP09871.1| putative helicase [Vibrio cholerae O395] Length = 1146 Score = 56.1 bits (134), Expect = 3e-06, Method: Composition-based stats. Identities = 21/115 (18%), Positives = 50/115 (43%), Gaps = 11/115 (9%) Query: 86 KAFPQGRTLDKDPCTIQEWNEGK-IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEH 144 KA + +++ I ++ + L+ P + G GL + G N +V +W+ + Sbjct: 868 KAVAKRKSVPTRKSMISDFEAKEGFNLIVMSPVAAGVGLTV-VGANHVVHLERYWNPAKE 926 Query: 145 QQMIERIGVTRQRQAGFKRAVFVY----YLIAQNTIDELVLQRLRTKSTIQDLLL 195 Q +R+ + G ++ V +Y + + D + + L K+ ++D ++ Sbjct: 927 AQATDRV-----YRIGQEKEVHIYIPLLHHPEFESFDVNLHRLLTQKTLLKDAVV 976 >gi|224010774|ref|XP_002294344.1| predicted protein [Thalassiosira pseudonana CCMP1335] gi|220969839|gb|EED88178.1| predicted protein [Thalassiosira pseudonana CCMP1335] Length = 1504 Score = 55.7 bits (133), Expect = 3e-06, Method: Composition-based stats. Identities = 29/172 (16%), Positives = 58/172 (33%), Gaps = 22/172 (12%) Query: 22 AFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDL 81 A + K LQL N + ++ E+ IV F Sbjct: 1281 ASKAKYTIDKLLQLRN-----ESSRNVSELAVRMFSKSSTHSSSHRPLKAIVFSQFRPIY 1335 Query: 82 A----RLQKAFPQG-----RTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNI 131 RL + F ++++ + + ++ HGL+L + Sbjct: 1336 EYFGDRLIREFGGACVADFSFTKTRNEELKKFRLDPQCFIMLLS-KQGSHGLDLSF-CTH 1393 Query: 132 LVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQR 183 + F +D QQ++ R + G V+V L A+++I+E++ + Sbjct: 1394 IFFLDTIYDKSLEQQVVAR-----AYRMGATGPVYVEQLTAKDSIEEVMNEM 1440 >gi|121585835|ref|ZP_01675629.1| hypothetical protein VC274080_1814 [Vibrio cholerae 2740-80] gi|121727705|ref|ZP_01680800.1| hypothetical protein VCV52_1735 [Vibrio cholerae V52] gi|153819628|ref|ZP_01972295.1| hypothetical protein A5C_1794 [Vibrio cholerae NCTC 8457] gi|153821151|ref|ZP_01973818.1| hypothetical protein A5E_2062 [Vibrio cholerae B33] gi|227081906|ref|YP_002810457.1| putative helicase [Vibrio cholerae M66-2] gi|255744824|ref|ZP_05418774.1| helicase putative [Vibrio cholera CIRS 101] gi|262161893|ref|ZP_06030911.1| helicase putative [Vibrio cholerae INDRE 91/1] gi|262169761|ref|ZP_06037452.1| helicase putative [Vibrio cholerae RC27] gi|298498169|ref|ZP_07007976.1| conserved hypothetical protein [Vibrio cholerae MAK 757] gi|121549973|gb|EAX59991.1| hypothetical protein VC274080_1814 [Vibrio cholerae 2740-80] gi|121630002|gb|EAX62410.1| hypothetical protein VCV52_1735 [Vibrio cholerae V52] gi|126509832|gb|EAZ72426.1| hypothetical protein A5C_1794 [Vibrio cholerae NCTC 8457] gi|126521347|gb|EAZ78570.1| hypothetical protein A5E_2062 [Vibrio cholerae B33] gi|227009794|gb|ACP06006.1| putative helicase [Vibrio cholerae M66-2] gi|255737295|gb|EET92690.1| helicase putative [Vibrio cholera CIRS 101] gi|262021995|gb|EEY40705.1| helicase putative [Vibrio cholerae RC27] gi|262028625|gb|EEY47280.1| helicase putative [Vibrio cholerae INDRE 91/1] gi|297542502|gb|EFH78552.1| conserved hypothetical protein [Vibrio cholerae MAK 757] Length = 1149 Score = 55.7 bits (133), Expect = 3e-06, Method: Composition-based stats. Identities = 21/115 (18%), Positives = 50/115 (43%), Gaps = 11/115 (9%) Query: 86 KAFPQGRTLDKDPCTIQEWNEGK-IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEH 144 KA + +++ I ++ + L+ P + G GL + G N +V +W+ + Sbjct: 871 KAVAKRKSVPTRKSMISDFEAKEGFNLIVMSPVAAGVGLTV-VGANHVVHLERYWNPAKE 929 Query: 145 QQMIERIGVTRQRQAGFKRAVFVY----YLIAQNTIDELVLQRLRTKSTIQDLLL 195 Q +R+ + G ++ V +Y + + D + + L K+ ++D ++ Sbjct: 930 AQATDRV-----YRIGQEKEVHIYIPLLHHPEFESFDVNLHRLLTQKTLLKDAVV 979 >gi|15227191|ref|NP_179232.1| DRD1 (DEFECTIVE IN RNA-DIRECTED DNA METHYLATION 1); ATP binding / DNA binding / helicase/ nucleic acid binding [Arabidopsis thaliana] gi|4544390|gb|AAD22300.1| hypothetical protein [Arabidopsis thaliana] gi|330251398|gb|AEC06492.1| SNF2 and helicase domain-containing protein [Arabidopsis thaliana] Length = 888 Score = 55.7 bits (133), Expect = 3e-06, Method: Composition-based stats. Identities = 27/136 (19%), Positives = 55/136 (40%), Gaps = 23/136 (16%) Query: 59 LEVIIEKANAAPIIVAYH------FNSDLARLQKAFPQGRTL---------DKDPCTIQE 103 L + + A ++V F LA L K + G+ + ++ +++ Sbjct: 702 LINLCDSA-GEKLLVFSQYLIPLKFLERLAALAKGWKLGKEVFVLTGNTSSEQREWSMET 760 Query: 104 WNE-GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFK 162 +N + F +CG G++L G + ++ + + +Q I R + G K Sbjct: 761 FNSSPDAKIFFGSIKACGEGISL-VGASRILILDVPLNPSVTRQAIGR-----AFRPGQK 814 Query: 163 RAVFVYYLIAQNTIDE 178 + V Y LIA ++ +E Sbjct: 815 KMVHAYRLIAGSSPEE 830 >gi|18254358|gb|AAL66728.1|AF459401_1 putative helicase [Vibrio cholerae] Length = 507 Score = 55.7 bits (133), Expect = 3e-06, Method: Composition-based stats. Identities = 21/115 (18%), Positives = 50/115 (43%), Gaps = 11/115 (9%) Query: 86 KAFPQGRTLDKDPCTIQEWNEGK-IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEH 144 KA + +++ I ++ + L+ P + G GL + G N +V +W+ + Sbjct: 234 KAVAKRKSVPTRKSMISDFEAKEGFNLIVMSPVAAGVGLTV-VGANHVVHLERYWNPAKE 292 Query: 145 QQMIERIGVTRQRQAGFKRAVFVY----YLIAQNTIDELVLQRLRTKSTIQDLLL 195 Q +R+ + G ++ V +Y + + D + + L K+ ++D ++ Sbjct: 293 AQATDRV-----YRIGQEKEVHIYIPLLHHPEFESFDVNLHRLLTQKTLLKDAVV 342 >gi|297571358|ref|YP_003697132.1| SNF2-related protein [Arcanobacterium haemolyticum DSM 20595] gi|296931705|gb|ADH92513.1| SNF2-related protein [Arcanobacterium haemolyticum DSM 20595] Length = 948 Score = 55.7 bits (133), Expect = 3e-06, Method: Composition-based stats. Identities = 23/104 (22%), Positives = 45/104 (43%), Gaps = 9/104 (8%) Query: 95 DKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 D+ + E+ + L + G+NLQ+ ++LV + L W+ + +Q I R+ Sbjct: 484 DRRKALVDEFRDRGR--LMIATEAAAEGINLQF-CSMLVNYDLPWNPQRIEQRIGRV--- 537 Query: 155 RQRQAGFKRAVFVYYLIAQNTI-DELVLQRLRTKSTIQDLLLNA 197 + G K V V + + +E +L+ L K + + A Sbjct: 538 --HRFGQKHNVIVVNFSNKGNLAEERILELLTEKFQLFTSVFGA 579 >gi|320449563|ref|YP_004201659.1| type III restriction enzyme subunit res [Thermus scotoductus SA-01] gi|320149732|gb|ADW21110.1| type III restriction enzyme, subunit res [Thermus scotoductus SA-01] Length = 1189 Score = 55.7 bits (133), Expect = 3e-06, Method: Composition-based stats. Identities = 20/95 (21%), Positives = 42/95 (44%), Gaps = 8/95 (8%) Query: 94 LDKDPCTIQEW-NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIG 152 ++ + + ++ ++ +L A + G G+NLQ +++V + L W+ +Q RI Sbjct: 565 REERSKAQEAFLHDPEVQVLVA-TDAAGEGINLQR-AHLMVNYDLPWNPNRLEQRFGRI- 621 Query: 153 VTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTK 187 + G ++ L+A T + V L K Sbjct: 622 ----HRIGQTEPCHMWNLVAIETREGDVYHTLLRK 652 >gi|134055899|emb|CAK37377.2| unnamed protein product [Aspergillus niger] Length = 987 Score = 55.7 bits (133), Expect = 3e-06, Method: Composition-based stats. Identities = 22/157 (14%), Positives = 47/157 (29%), Gaps = 16/157 (10%) Query: 42 YDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQ----------- 90 D + + + L I + IV + L L F Q Sbjct: 825 IDSPQANDVYPSKLVTLLTDIRKHYLEDKSIVFSFWRQSLDVLGGMFDQNSISFCRVDGI 884 Query: 91 GRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 + + + N + +L + GLN + + W+ Q I R Sbjct: 885 MSPMKRQTMLEEFQNNSAVRVLLMTIGTGAVGLNNLSVASRVHILEPQWNPSVESQAIGR 944 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTK 187 + G + ++V + + T+++++ K Sbjct: 945 -----ALRWGQGKKIYVIRYVMEGTVEKIIESGQLRK 976 >gi|229508136|ref|ZP_04397641.1| hypothetical protein VCF_003370 [Vibrio cholerae BX 330286] gi|229511625|ref|ZP_04401104.1| hypothetical protein VCE_003034 [Vibrio cholerae B33] gi|229518764|ref|ZP_04408207.1| hypothetical protein VCC_002789 [Vibrio cholerae RC9] gi|229343453|gb|EEO08428.1| hypothetical protein VCC_002789 [Vibrio cholerae RC9] gi|229351590|gb|EEO16531.1| hypothetical protein VCE_003034 [Vibrio cholerae B33] gi|229355641|gb|EEO20562.1| hypothetical protein VCF_003370 [Vibrio cholerae BX 330286] Length = 932 Score = 55.7 bits (133), Expect = 3e-06, Method: Composition-based stats. Identities = 21/115 (18%), Positives = 50/115 (43%), Gaps = 11/115 (9%) Query: 86 KAFPQGRTLDKDPCTIQEWNEGK-IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEH 144 KA + +++ I ++ + L+ P + G GL + G N +V +W+ + Sbjct: 654 KAVAKRKSVPTRKSMISDFEAKEGFNLIVMSPVAAGVGLTV-VGANHVVHLERYWNPAKE 712 Query: 145 QQMIERIGVTRQRQAGFKRAVFVY----YLIAQNTIDELVLQRLRTKSTIQDLLL 195 Q +R+ + G ++ V +Y + + D + + L K+ ++D ++ Sbjct: 713 AQATDRV-----YRIGQEKEVHIYIPLLHHPEFESFDVNLHRLLTQKTLLKDAVV 762 >gi|58260784|ref|XP_567802.1| DNA repair protein rad8 [Cryptococcus neoformans var. neoformans JEC21] gi|57229883|gb|AAW46285.1| DNA repair protein rad8, putative [Cryptococcus neoformans var. neoformans JEC21] Length = 1856 Score = 55.7 bits (133), Expect = 3e-06, Method: Composition-based stats. Identities = 27/154 (17%), Positives = 55/154 (35%), Gaps = 19/154 (12%) Query: 54 EKIKALEVIIEKA-NAAPIIVAYHFNSDLARLQKAFPQGRT--------LDKDPCTIQEW 104 K++ L +I ++V + ++ +A G+ T+ + Sbjct: 1693 AKLEHLVNLIHSIPKDERVLVFLQWEDLAGKVSEALSAGKIPHVTLSGSAKSRANTLDRF 1752 Query: 105 ---NEGKIPLLFAHPA-SCGHGLNLQYGGNILVFFSL--WWDLEEHQQMIERIGVTRQRQ 158 N +L + G NL N +F L ++ +E + R R+ Sbjct: 1753 QSTNADTARVLLLKMNDASAAGSNLTT-ANHAIFLGPLFTNSLFNYR-AVETQAIGRVRR 1810 Query: 159 AGFKRAVFVYYLIAQNTIDELVL--QRLRTKSTI 190 G ++ V ++ L+A +TID + +R K Sbjct: 1811 YGQQKKVHIHRLLALDTIDMTIFNTRRAELKEKT 1844 >gi|254228180|ref|ZP_04921609.1| helicase [Vibrio sp. Ex25] gi|262394013|ref|YP_003285867.1| helicase putative [Vibrio sp. Ex25] gi|151939253|gb|EDN58082.1| helicase [Vibrio sp. Ex25] gi|262337607|gb|ACY51402.1| helicase putative [Vibrio sp. Ex25] Length = 1149 Score = 55.7 bits (133), Expect = 3e-06, Method: Composition-based stats. Identities = 21/115 (18%), Positives = 48/115 (41%), Gaps = 11/115 (9%) Query: 86 KAFPQGRTLDKDPCTIQEWNEGK-IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEH 144 KA + ++ I ++ + L+ P + G GL + G N +V W+ + Sbjct: 871 KAVAKRKSAPTRKSMISDFEAKEGFNLIVMSPVAAGVGLTV-VGANHVVHLERHWNPAKE 929 Query: 145 QQMIERIGVTRQRQAGFKRAVFVY----YLIAQNTIDELVLQRLRTKSTIQDLLL 195 Q +R+ + G ++ V +Y + + D + + L K+ ++D ++ Sbjct: 930 AQATDRV-----YRIGQEKDVHIYIPLLHHPEFESFDVNLHRLLTQKTLLKDAVV 979 >gi|134117273|ref|XP_772863.1| hypothetical protein CNBK2340 [Cryptococcus neoformans var. neoformans B-3501A] gi|50255481|gb|EAL18216.1| hypothetical protein CNBK2340 [Cryptococcus neoformans var. neoformans B-3501A] Length = 2291 Score = 55.7 bits (133), Expect = 3e-06, Method: Composition-based stats. Identities = 27/154 (17%), Positives = 55/154 (35%), Gaps = 19/154 (12%) Query: 54 EKIKALEVIIEKA-NAAPIIVAYHFNSDLARLQKAFPQGRT--------LDKDPCTIQEW 104 K++ L +I ++V + ++ +A G+ T+ + Sbjct: 2128 AKLEHLVNLIHSIPKDERVLVFLQWEDLAGKVSEALSAGKIPHVTLSGSAKSRANTLDRF 2187 Query: 105 ---NEGKIPLLFAHPA-SCGHGLNLQYGGNILVFFSL--WWDLEEHQQMIERIGVTRQRQ 158 N +L + G NL N +F L ++ +E + R R+ Sbjct: 2188 QSTNADTARVLLLKMNDASAAGSNLTT-ANHAIFLGPLFTNSLFNYR-AVETQAIGRVRR 2245 Query: 159 AGFKRAVFVYYLIAQNTIDELVL--QRLRTKSTI 190 G ++ V ++ L+A +TID + +R K Sbjct: 2246 YGQQKKVHIHRLLALDTIDMTIFNTRRAELKEKT 2279 >gi|15641763|ref|NP_231395.1| helicase, putative [Vibrio cholerae O1 biovar El Tor str. N16961] gi|9656282|gb|AAF94909.1| helicase, putative [Vibrio cholerae O1 biovar El Tor str. N16961] Length = 940 Score = 55.7 bits (133), Expect = 3e-06, Method: Composition-based stats. Identities = 21/115 (18%), Positives = 50/115 (43%), Gaps = 11/115 (9%) Query: 86 KAFPQGRTLDKDPCTIQEWNEGK-IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEH 144 KA + +++ I ++ + L+ P + G GL + G N +V +W+ + Sbjct: 662 KAVAKRKSVPTRKSMISDFEAKEGFNLIVMSPVAAGVGLTV-VGANHVVHLERYWNPAKE 720 Query: 145 QQMIERIGVTRQRQAGFKRAVFVY----YLIAQNTIDELVLQRLRTKSTIQDLLL 195 Q +R+ + G ++ V +Y + + D + + L K+ ++D ++ Sbjct: 721 AQATDRV-----YRIGQEKEVHIYIPLLHHPEFESFDVNLHRLLTQKTLLKDAVV 770 >gi|326479420|gb|EGE03430.1| cytosine-specific DNA methylase [Trichophyton equinum CBS 127.97] Length = 2106 Score = 55.7 bits (133), Expect = 3e-06, Method: Composition-based stats. Identities = 28/139 (20%), Positives = 53/139 (38%), Gaps = 11/139 (7%) Query: 54 EKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEG---KIP 110 K A+ ++E A P + AR+ Q T + N K Sbjct: 1927 SKFTAVIELLEDAKRVPADDQA---LESARIPHTVIQPGDRTPTSKTSEFQNGKESVKSK 1983 Query: 111 LLFAHPAS-CGHGLNLQYGGNILVFFSL--WWDLEEHQQMIERIGVTRQRQAGFKRAVFV 167 +L + GLNLQ N ++FF ++ + + R R+ G + V + Sbjct: 1984 VLILNLGDVTASGLNLQN-ANHIIFFGPLVARSQYDYNSGMA-QAIGRSRRYGQLKHVHI 2041 Query: 168 YYLIAQNTIDELVLQRLRT 186 Y+++A T++ + ++ R Sbjct: 2042 YHVLALRTVEVNIFEKRRK 2060 >gi|322412357|gb|EFY03265.1| helicase [Streptococcus dysgalactiae subsp. dysgalactiae ATCC 27957] Length = 1998 Score = 55.7 bits (133), Expect = 3e-06, Method: Composition-based stats. Identities = 21/88 (23%), Positives = 36/88 (40%), Gaps = 4/88 (4%) Query: 90 QGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIE 149 T DK ++ N G++ +L A G GLN+Q + + W + Q Sbjct: 1905 DANTDDKKNSLSRKVNSGEVRILMASTEKGGTGLNVQSRMKAVHHLDVPWRPSDIVQRNG 1964 Query: 150 RIGVTRQRQAGFKRAVFVYYLIAQNTID 177 R+ RQ + V +Y+ I + + D Sbjct: 1965 RLI----RQGNMHQEVDIYHYITKGSFD 1988 >gi|323452723|gb|EGB08596.1| hypothetical protein AURANDRAFT_7744 [Aureococcus anophagefferens] Length = 129 Score = 55.7 bits (133), Expect = 4e-06, Method: Composition-based stats. Identities = 23/131 (17%), Positives = 42/131 (32%), Gaps = 19/131 (14%) Query: 72 IVAYHFNSDLARLQK----------AFPQGRTLDKDPCTIQEWNEGKIP---LLFAHPAS 118 +V F S L + +L + + LF + Sbjct: 3 LVFSRFASFLRAAEAAAAAAGLRTLRIDGAVSLAARQAACERFQRRDARGNVALFITIGA 62 Query: 119 CGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDE 178 G GLNL + +V +W+ Q + R + G R + V L + T++ Sbjct: 63 GGEGLNLT-AADAVVLCEPYWNEPVEDQAVAR-----AHRIGRARPLDVVRLHIEKTVEV 116 Query: 179 LVLQRLRTKST 189 + + R K+ Sbjct: 117 PIAKLKRDKAA 127 >gi|18640171|ref|NP_570245.1| SPV085 putative NPH-I transcription termination factor [Swinepox virus] gi|18448578|gb|AAL69824.1| SPV085 putative NPH-I transcription termination factor [Swinepox virus] Length = 632 Score = 55.7 bits (133), Expect = 4e-06, Method: Composition-based stats. Identities = 39/201 (19%), Positives = 80/201 (39%), Gaps = 19/201 (9%) Query: 16 QGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAY 75 G ++ S+S QL + + + + K E + ++ I++ Y Sbjct: 342 SGNDLGGDVSSSDISLLSQLRERSCKFTDVCLRILMSPGKCLVFEPFVNQS-GIGILLLY 400 Query: 76 HFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGK------IPLLFAHPASCGHGLNLQYGG 129 D+ ++ RT DK ++ +N+ I + S G G++ Sbjct: 401 ---FDVFKISYIEFSSRTKDKRVKMVERFNDKNNTNGDMIKVCVFSL-SGGEGISFFSIN 456 Query: 130 NILVFFSLWWDLEEHQQMIERIGVTRQR--QAGFKRAVFVYYLIAQ-----NTIDELVLQ 182 +I + + W+ +Q+I R ++ V V+++IA+ T+DE +L+ Sbjct: 457 DIFIL-DMTWNEASLRQIIGRAIRMNSHMCTPEERKYVNVHFIIARMSNGEPTVDEDLLE 515 Query: 183 RLRTKSTIQDLLLNALKKETI 203 +RTKS L L++ +I Sbjct: 516 IIRTKSKEFTQLFKILRESSI 536 >gi|15823603|dbj|BAB69051.1| putative RNA polymerase associated protein [Sphaerotilus natans] Length = 247 Score = 55.7 bits (133), Expect = 4e-06, Method: Composition-based stats. Identities = 23/140 (16%), Positives = 54/140 (38%), Gaps = 14/140 (10%) Query: 68 AAPIIVAYHFNSDLARLQKAFPQGRTLD-------KDPCTIQEWNEGKIPLLFAHPASCG 120 +++ + + L L K + ++ + + Sbjct: 10 GKKVVLFAFYRNTLYYLAKRLAEAGVKSIVLHGGMDKSEVLRSFEGDDSVQILLSSEVAS 69 Query: 121 HGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKR-AVFVYYLIAQNTIDEL 179 G++LQ+ ++LV + L W+ +Q I RI + G + ++ L+ ++T+DE Sbjct: 70 EGVDLQFS-SLLVNYDLPWNPARIEQRIGRID-----RIGQAEAKILIWNLVYEDTLDER 123 Query: 180 VLQRLRTKSTIQDLLLNALK 199 V RL + + L +++ Sbjct: 124 VHDRLLERLNVFRQALGSME 143 >gi|91202363|emb|CAJ75423.1| similar to helicase subunit of dna repair complex [Candidatus Kuenenia stuttgartiensis] Length = 964 Score = 55.7 bits (133), Expect = 4e-06, Method: Composition-based stats. Identities = 24/112 (21%), Positives = 47/112 (41%), Gaps = 9/112 (8%) Query: 87 AFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 ++ DK + + ++ + G+NLQ+ +++V + L W+ + +Q Sbjct: 487 RITGSKSADKRAAIVDYF--RDEAVIMIATEAAAEGINLQF-CSLVVNYDLPWNPQRIEQ 543 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQ-NTIDELVLQRLRTKSTIQDLLLNA 197 I R + G K V V + + N D+ V Q L+ K + D + A Sbjct: 544 RIGRC-----HRYGQKFDVVVVNFLNKSNAADQRVYQLLKEKFKLFDGIFGA 590 >gi|312222342|emb|CBY02282.1| hypothetical protein [Leptosphaeria maculans] Length = 2343 Score = 55.7 bits (133), Expect = 4e-06, Method: Composition-based stats. Identities = 24/106 (22%), Positives = 48/106 (45%), Gaps = 19/106 (17%) Query: 96 KDPCTIQEWNEGKIP-----LLFAHPAS-CGHGLNLQYGGNILVFFSLWWDLEEHQ---- 145 + I+++ + P L+ + S G+NL N ++F S +++ Sbjct: 2171 QSAKIIEDFKNNENPDERRKLVILNLGSESAAGINLTN-ANHIIFVSPLAAKTQYEYDSA 2229 Query: 146 --QMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKST 189 Q I R R+ G K+ V++Y+++A+ TID +++ R K Sbjct: 2230 MVQAIAR-----SRRYGQKKKVYIYHVVAERTIDVDIME-HRHKRN 2269 >gi|169602036|ref|XP_001794440.1| hypothetical protein SNOG_03896 [Phaeosphaeria nodorum SN15] gi|160706060|gb|EAT89101.2| hypothetical protein SNOG_03896 [Phaeosphaeria nodorum SN15] Length = 1444 Score = 55.7 bits (133), Expect = 4e-06, Method: Composition-based stats. Identities = 24/119 (20%), Positives = 40/119 (33%), Gaps = 10/119 (8%) Query: 68 AAPIIVAYHFNSDLARLQKAFPQGRTLDK---DPCTIQEWNEGK-IPLLFAHPASCGHGL 123 A I+ F L L++A + R D IQ + I S GL Sbjct: 1224 GAKSIIFSQFGDFLEVLREALRKWRIGVSGIIDKEGIQRFKSDAGIECFLLDAKSDSSGL 1283 Query: 124 NLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQ 182 NL + + Q I R+ + G +R V+ + +T++E + Sbjct: 1284 NL-VNATYVFLCEPLINPAIELQAIARV-----HRIGQQRPTTVFMYLISDTVEEAIYD 1336 >gi|289621334|emb|CBI52117.1| unnamed protein product [Sordaria macrospora] Length = 1142 Score = 55.7 bits (133), Expect = 4e-06, Method: Composition-based stats. Identities = 26/150 (17%), Positives = 59/150 (39%), Gaps = 18/150 (12%) Query: 49 KEVHDEKIKALEV-IIEKANAAPIIVAYHFN---SDLARLQKA-------FPQGRTLDKD 97 K+ L II A I+V Y + LA + + + +G T + Sbjct: 826 ISTASAKLSYLVDQIIRHQEAEQILVFYENDNVAYYLAEVLEVLGIQHLIYAKGITSARK 885 Query: 98 PCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 + + + + ++ + +GL+++ + + F + + + Q I R Sbjct: 886 NQYLATFTLKQQFRVMLMDISQAAYGLDMKT-ASRIYFINPVLNPQVGAQAIGR-----A 939 Query: 157 RQAGFKRAVFVYYLIAQNTIDELVLQRLRT 186 R+ + V V L+ + +IDE++++R Sbjct: 940 RRISQHKPVTVETLVLRGSIDEVIVRRREE 969 >gi|229607712|ref|YP_002878360.1| hypothetical protein VCD_002624 [Vibrio cholerae MJ-1236] gi|229370367|gb|ACQ60790.1| hypothetical protein VCD_002624 [Vibrio cholerae MJ-1236] Length = 746 Score = 55.7 bits (133), Expect = 4e-06, Method: Composition-based stats. Identities = 21/115 (18%), Positives = 50/115 (43%), Gaps = 11/115 (9%) Query: 86 KAFPQGRTLDKDPCTIQEWNEGK-IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEH 144 KA + +++ I ++ + L+ P + G GL + G N +V +W+ + Sbjct: 468 KAVAKRKSVPTRKSMISDFEAKEGFNLIVMSPVAAGVGLTV-VGANHVVHLERYWNPAKE 526 Query: 145 QQMIERIGVTRQRQAGFKRAVFVY----YLIAQNTIDELVLQRLRTKSTIQDLLL 195 Q +R+ + G ++ V +Y + + D + + L K+ ++D ++ Sbjct: 527 AQATDRV-----YRIGQEKEVHIYIPLLHHPEFESFDVNLHRLLTQKTLLKDAVV 576 >gi|213962117|ref|ZP_03390381.1| type III restriction enzyme, res subunit family [Capnocytophaga sputigena Capno] gi|213955123|gb|EEB66441.1| type III restriction enzyme, res subunit family [Capnocytophaga sputigena Capno] Length = 2020 Score = 55.7 bits (133), Expect = 4e-06, Method: Composition-based stats. Identities = 28/124 (22%), Positives = 54/124 (43%), Gaps = 11/124 (8%) Query: 77 FNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFS 136 + SD + ++ +++N GKI ++ + G+NLQ + + Sbjct: 1693 YKSDEVGI---ITGATNKNQRLDIQEKFNAGKIKIVIGS-EAIQEGMNLQENTTDMYLLT 1748 Query: 137 LWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 L ++ +Q R+ RQ V V Y++ ++ID +LQ+L+ K Q + Sbjct: 1749 LPYNFTSLRQTEGRM----WRQGNKWENVRVNYMLTNDSIDVFMLQKLQAK---QSRYME 1801 Query: 197 ALKK 200 A+KK Sbjct: 1802 AIKK 1805 >gi|298528754|ref|ZP_07016158.1| helicase domain protein [Desulfonatronospira thiodismutans ASO3-1] gi|298512406|gb|EFI36308.1| helicase domain protein [Desulfonatronospira thiodismutans ASO3-1] Length = 955 Score = 55.7 bits (133), Expect = 4e-06, Method: Composition-based stats. Identities = 22/102 (21%), Positives = 38/102 (37%), Gaps = 15/102 (14%) Query: 96 KDPCTIQEWNEGKIPL-LFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 + ++++ + PL L G+NL Y + L+ F + W L QQ RI Sbjct: 493 EQQRVVEDFGRDESPLRLLIASDVASEGINLHYLCHRLIHFDIPWSLMVFQQRNGRIDRY 552 Query: 155 RQRQ-------AGFKRAVFVYYLIAQNTIDELVLQRLRTKST 189 Q + A R ++ D +L+ L +K Sbjct: 553 GQERTPLISYLAIQSREPKIHG-------DMRILELLISKDE 587 >gi|270015594|gb|EFA12042.1| hypothetical protein TcasGA2_TC001459 [Tribolium castaneum] Length = 552 Score = 55.7 bits (133), Expect = 4e-06, Method: Composition-based stats. Identities = 15/55 (27%), Positives = 28/55 (50%) Query: 141 LEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 L + M++ R + G + V VY L+ + TIDE++L R K + +++ Sbjct: 436 LTDENPMVDLQAQDRCHRIGQTKPVMVYSLVTKGTIDEIILNRADVKKRLGKVVI 490 >gi|153004208|ref|YP_001378533.1| helicase domain-containing protein [Anaeromyxobacter sp. Fw109-5] gi|152027781|gb|ABS25549.1| helicase domain protein [Anaeromyxobacter sp. Fw109-5] Length = 921 Score = 55.7 bits (133), Expect = 4e-06, Method: Composition-based stats. Identities = 34/138 (24%), Positives = 54/138 (39%), Gaps = 20/138 (14%) Query: 70 PIIVAYHFN---SDLARLQKAFPQGRT--------LDKDPCTIQEWNEGKIPLLFAHPAS 118 +V F LARL KA T DK ++E+ + + Sbjct: 439 KAVVFTEFRRTQDYLARLLKAKGYTVTCLSGDVGGTDKRQALVEEFRNRTQ--ILIMTEA 496 Query: 119 CGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIA-QNTID 177 GLNLQ+ N++V + L W+ + +Q I R + G +R V V + QN D Sbjct: 497 GAEGLNLQF-CNLVVNYDLPWNPQRVEQRIGRC-----HRYGQQRDVLVLNFLNRQNAAD 550 Query: 178 ELVLQRLRTKSTIQDLLL 195 + + L K + D + Sbjct: 551 NRLYELLSQKLALFDGVF 568 >gi|301769905|ref|XP_002920371.1| PREDICTED: putative DNA repair and recombination protein RAD26-like, partial [Ailuropoda melanoleuca] Length = 802 Score = 55.7 bits (133), Expect = 4e-06, Method: Composition-based stats. Identities = 23/110 (20%), Positives = 43/110 (39%), Gaps = 14/110 (12%) Query: 53 DEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQK---------AFPQGRTLDKDP-CT 100 K+K L+ ++ + N I++ L LQ+ G T ++ Sbjct: 694 SGKMKVLQQLLNHCRKNKDKILLFSFSTKLLDVLQQYCMAAGLDYRRLDGSTKSEERIKI 753 Query: 101 IQEWNE-GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIE 149 ++E+N + + + G GLN G N++V F W+ Q I+ Sbjct: 754 VKEFNSTQDVNICLVSTMAGGLGLNF-VGANVVVLFDPTWNPANDLQAID 802 >gi|189192276|ref|XP_001932477.1| conserved hypothetical protein [Pyrenophora tritici-repentis Pt-1C-BFP] gi|187974083|gb|EDU41582.1| conserved hypothetical protein [Pyrenophora tritici-repentis Pt-1C-BFP] Length = 2299 Score = 55.7 bits (133), Expect = 4e-06, Method: Composition-based stats. Identities = 36/201 (17%), Positives = 79/201 (39%), Gaps = 28/201 (13%) Query: 10 ELYCDLQGENIEAFNSASKT----VKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEK 65 + + + ++ + K + + +AN + E ++ +K+ A+ +I + Sbjct: 2027 QSCLEARSDDETCVHPGCKARLGDGELIPMAN--LGSKESHDPDQIFGKKLHAIVQLISE 2084 Query: 66 ANAAPIIVAYHFNSDLAR-LQKAFPQGRTLD------KDPCTIQEWNEGKIPLL------ 112 A + + N DL +++ + + I+E+ K P Sbjct: 2085 MPPADQGIIFAPNDDLMSVIERVLDHYKIRYATIRQTRIAQVIEEFKTNKKPATMKKLLI 2144 Query: 113 --FAHPASCGHGLNLQYGGNILVFFSL--WWDLEEHQQMIERIGVTRQRQAGFKRAVFVY 168 +P++ G+NL N + F S D ++ + + R R+ G + V +Y Sbjct: 2145 LNLGNPSAA--GINL-INANHVFFVSPLHADDQYKYDSAMA-QAIARSRRHGQGKTVHIY 2200 Query: 169 YLIAQNTIDELVLQRLRTKST 189 +++A TID +L+ R K T Sbjct: 2201 HVVALRTIDVDILE-HRHKRT 2220 >gi|121533618|ref|ZP_01665445.1| helicase domain protein [Thermosinus carboxydivorans Nor1] gi|121307609|gb|EAX48524.1| helicase domain protein [Thermosinus carboxydivorans Nor1] Length = 1163 Score = 55.7 bits (133), Expect = 4e-06, Method: Composition-based stats. Identities = 37/194 (19%), Positives = 70/194 (36%), Gaps = 32/194 (16%) Query: 6 KFQREL----YCDLQGENIEAFNSASK---TVKCLQLANGAVYYDEEKHWKEV-----HD 53 + + E+ Y + + + + A + K K LQ N +D +++ H Sbjct: 460 ELEAEIDKLRYLEKRAKELRASGADRKWDELSKLLQ--NETAMFDAGGMRRKLVIFTEHR 517 Query: 54 EKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLF 113 + + L I VA +Q GR K + + K + Sbjct: 518 DTLNYLAEKIRSLLGRDDAVA--------TIQGGM--GREERKRVQEL--FTHDKHVHIL 565 Query: 114 AHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQ 173 + G G+NLQ N+++ + L W+ +Q RI + G ++ ++A Sbjct: 566 IATDAAGEGINLQR-ANLMINYDLPWNPNRLEQRFGRI-----HRIGQTEVCHLWNMVAV 619 Query: 174 NTIDELVLQRLRTK 187 +T + V RL K Sbjct: 620 DTREGEVYFRLLKK 633 >gi|329734512|gb|EGG70824.1| helicase C-terminal domain protein [Staphylococcus epidermidis VCU028] Length = 624 Score = 55.7 bits (133), Expect = 4e-06, Method: Composition-based stats. Identities = 37/176 (21%), Positives = 71/176 (40%), Gaps = 28/176 (15%) Query: 49 KEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQ---------GRTLDKD 97 K V K + +IE + ++V F + ++ K + G T +D Sbjct: 440 KNVTSPKFEKGIELIENLVSQGKKVLVWGLFVGTMNKINKRLLESDINSILIYGETPKED 499 Query: 98 PCT-IQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 I + G +L ++P + G ++L + ++F ++L Q +RI Sbjct: 500 RVDMINNFRNGNAQVLISNPNTLGESISLHQTVHDAIYFEYNFNLTFMLQSRDRI----- 554 Query: 157 RQAGFKRAVF--VYYLIA------QNTIDELVLQRLRTKSTIQDLLLNALKKETIH 204 + G + YYL++ + ID+ V RL+ K D++LNA+ T+ Sbjct: 555 HRLGLNNNQYTRYYYLMSEGDRAHKGFIDKAVYNRLKEKE---DVMLNAIDGNTLK 607 >gi|327261911|ref|XP_003215770.1| PREDICTED: LOW QUALITY PROTEIN: e3 ubiquitin-protein ligase SHPRH-like [Anolis carolinensis] Length = 1698 Score = 55.3 bits (132), Expect = 4e-06, Method: Composition-based stats. Identities = 30/165 (18%), Positives = 58/165 (35%), Gaps = 27/165 (16%) Query: 43 DEEKHWKEVHDEKIKA----LEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRT----L 94 +++ K H K++A L+ I K A +V + L + K F + Sbjct: 1505 EDDIPVKGSHSTKVEAVVRTLKRIQFKDPGAKSLVFSTWQDVLDIIAKYFTTLECPLACI 1564 Query: 95 DKDPCTIQEWN-------------EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDL 141 K I + + KI +L + +GLN+ +L + Sbjct: 1565 GKCXLCICVFPISIFXENLSAFKYDPKINILLLPLHTGSNGLNIIEATQVL-LVEPILNP 1623 Query: 142 EEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRT 186 Q I R+ + G + V+ + + TI+E + ++T Sbjct: 1624 AHELQAIGRV-----HRIGQTKPTIVHRFLIKATIEERMQTMMKT 1663 >gi|229143655|ref|ZP_04272078.1| hypothetical protein bcere0012_8220 [Bacillus cereus BDRD-ST24] gi|228639834|gb|EEK96241.1| hypothetical protein bcere0012_8220 [Bacillus cereus BDRD-ST24] Length = 642 Score = 55.3 bits (132), Expect = 4e-06, Method: Composition-based stats. Identities = 33/178 (18%), Positives = 69/178 (38%), Gaps = 26/178 (14%) Query: 34 QLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLAR---------L 84 +L N + Y+ D +K ++ +I + +IV + + R + Sbjct: 433 ELINTLINYERTNSVPPKFDAALKLIQDLIRR--DEKVIVWAIYIDTVERFSDYLLENGI 490 Query: 85 QKAFPQGRTL----------DKDPCTIQEW--NEGKIPLLFAHPASCGHGLNLQYGGNIL 132 + G+T + I+E+ +E + ++ A+P + ++L + Sbjct: 491 ECKILYGKTKVESEGLDEAVETREKIIREFHSDESEFKVIIANPFAVAESISLHKACHNA 550 Query: 133 VFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 ++ +D + Q +RI G YYLI +N+IDE++ RL K + Sbjct: 551 IYLERNFDGARYVQSKDRIHRYG---LGMNTITNYYYLITENSIDEVIDDRLIEKENL 605 >gi|170780922|ref|YP_001709254.1| hypothetical protein CMS_0479 [Clavibacter michiganensis subsp. sepedonicus] gi|169155490|emb|CAQ00599.1| hypothetical protein CMS0479 [Clavibacter michiganensis subsp. sepedonicus] Length = 197 Score = 55.3 bits (132), Expect = 4e-06, Method: Composition-based stats. Identities = 32/140 (22%), Positives = 56/140 (40%), Gaps = 10/140 (7%) Query: 64 EKANAAPIIVAYHFNS---DLARLQKAF----PQGRTLDKDPCTIQEWNEGKIPLLFAHP 116 A +V F L R+ F G T D+D + ++ +L ++P Sbjct: 24 NAARGRKTLVWSTFIRSINTLERVLGRFGPAVVHGGTPDRDEQIRRFKHDDDCMVLLSNP 83 Query: 117 ASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTI 176 A+ G G++L + + V+ + Q ++RI G V V L ++ T+ Sbjct: 84 ATLGEGISLHHECHDAVYVDRDFAAGRFLQSLDRIHRLGL-PPGTSTRVTV--LASERTV 140 Query: 177 DELVLQRLRTKSTIQDLLLN 196 DE+V RL K +L+ Sbjct: 141 DEVVAARLGAKLAFMGGILD 160 >gi|320104896|ref|YP_004180487.1| SNF2-like protein [Isosphaera pallida ATCC 43644] gi|319752178|gb|ADV63938.1| SNF2-related protein [Isosphaera pallida ATCC 43644] Length = 955 Score = 55.3 bits (132), Expect = 4e-06, Method: Composition-based stats. Identities = 24/113 (21%), Positives = 46/113 (40%), Gaps = 9/113 (7%) Query: 86 KAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQ 145 + R +D I+ + + + G+NLQ+ +++V + L W+ + + Sbjct: 476 GRWSGSRAVDVRTALIEHF--RDHATILLATEAAAEGINLQF-CSLVVNYDLPWNPQRIE 532 Query: 146 QMIERIGVTRQRQAGFKRAVFVYYLIA-QNTIDELVLQRLRTKSTIQDLLLNA 197 Q I R + G K V V + +N D+ VL+ L K + + A Sbjct: 533 QRIGRC-----HRYGQKHDVVVINFLNERNAADQRVLELLSEKFNLFSGVFGA 580 >gi|257440757|ref|ZP_05616512.1| ATP-dependent helicase [Faecalibacterium prausnitzii A2-165] gi|257196731|gb|EEU95015.1| ATP-dependent helicase [Faecalibacterium prausnitzii A2-165] Length = 961 Score = 55.3 bits (132), Expect = 4e-06, Method: Composition-based stats. Identities = 39/205 (19%), Positives = 69/205 (33%), Gaps = 31/205 (15%) Query: 2 KQYHKFQRELYCDLQG--------ENIEAFNSASKTVKCLQLANGAVY---YDEEKHWKE 50 K Y K+ + D++ + N ++ K L+L Y + Sbjct: 401 KLYKKYTADDISDIRLLEELHTALGQVTPEN-FTRYQKLLELLRSDSYGWNPKDPGDRVV 459 Query: 51 VHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEW--NEGK 108 + E+I+ + + E + +S + + ++++ E Sbjct: 460 IFTERIETMNYLAEHLRTDLGL----KSSAIQEISGGMSDAE----QQRIVEDFGRTESS 511 Query: 109 IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVY 168 +L A + GLNL Y + L+ F + W L QQ RI Q KR Y Sbjct: 512 TRILVASDVAS-EGLNLHYLSHRLIHFDIPWSLMVFQQRNGRIDRYGQ----QKRPDIRY 566 Query: 169 YLIAQNTI----DELVLQRLRTKST 189 LI N D +++ L K Sbjct: 567 LLIESNNKQIKGDMRIIEILIQKEE 591 >gi|223039721|ref|ZP_03610006.1| helicase domain protein [Campylobacter rectus RM3267] gi|222878913|gb|EEF14009.1| helicase domain protein [Campylobacter rectus RM3267] Length = 463 Score = 55.3 bits (132), Expect = 4e-06, Method: Composition-based stats. Identities = 28/151 (18%), Positives = 56/151 (37%), Gaps = 14/151 (9%) Query: 53 DEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCT------IQEWNE 106 +++ + + I +N ++ N + A L+K + + ++ Sbjct: 283 EQRCEKVAEICNTSNE-NFLIWCELNDEGAMLKKLVADSVEIKGSDSDEFKARAMSDFAN 341 Query: 107 GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVF 166 GKI L P G G+N Q +++ SL E Q + R+ + G R V Sbjct: 342 GKIKCLITKPKIAGFGMNWQKHCANVIYASLSDSFEGFFQSLRRV-----YRYGQTREVT 396 Query: 167 VYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 Y + ++ + VL +R K ++ Sbjct: 397 CYIITSE--AEANVLANIRRKEAEFYKMIEG 425 >gi|150863827|ref|XP_001382433.2| DNA-dependent ATPase of the nucleotide excision repair factor 4 complex [Scheffersomyces stipitis CBS 6054] gi|149385083|gb|ABN64404.2| DNA-dependent ATPase of the nucleotide excision repair factor 4 complex [Scheffersomyces stipitis CBS 6054] Length = 1343 Score = 55.3 bits (132), Expect = 4e-06, Method: Composition-based stats. Identities = 17/75 (22%), Positives = 30/75 (40%), Gaps = 6/75 (8%) Query: 112 LFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLI 171 L HGL + + + F S W Q I+R + G + V V L+ Sbjct: 1127 LIMDLRLAAHGLTIVEATH-VYFMSPVWQRSIEAQAIKR-----AHRIGQTKDVHVETLV 1180 Query: 172 AQNTIDELVLQRLRT 186 + T++E + +R + Sbjct: 1181 LRGTLEEEIYKRRTS 1195 >gi|258514692|ref|YP_003190914.1| helicase domain-containing protein [Desulfotomaculum acetoxidans DSM 771] gi|257778397|gb|ACV62291.1| helicase domain protein [Desulfotomaculum acetoxidans DSM 771] Length = 945 Score = 55.3 bits (132), Expect = 5e-06, Method: Composition-based stats. Identities = 21/100 (21%), Positives = 40/100 (40%), Gaps = 11/100 (11%) Query: 95 DKDPCTIQEWNEGKIPL-LFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGV 153 + ++ + + P+ L G+NL + + L+ F + W L QQ RI Sbjct: 485 GEQQAVVESFGQENSPVRLLIASDVASEGINLHFLSHRLIHFDIPWSLMTFQQRNGRID- 543 Query: 154 TRQRQAGFKRAVFVYYLIAQNTI-----DELVLQRLRTKS 188 + G + +YYL+ + + D +L+ L K Sbjct: 544 ----RYGQECTPEIYYLVTETSNPKIRGDVRILEVLIQKD 579 >gi|262383481|ref|ZP_06076617.1| helicase domain-containing protein [Bacteroides sp. 2_1_33B] gi|262294379|gb|EEY82311.1| helicase domain-containing protein [Bacteroides sp. 2_1_33B] Length = 932 Score = 55.3 bits (132), Expect = 5e-06, Method: Composition-based stats. Identities = 38/169 (22%), Positives = 64/169 (37%), Gaps = 30/169 (17%) Query: 53 DEKIKALEVIIEKANAAPIIVA----YHFNSDLARLQKAFP---------QGRTLDKD-P 98 D K L + K I++ R+ + F G LD + Sbjct: 410 DAFKKVLTELWNKNPKERIVIFTERIATMKYLEERIIREFKLNKEQVVRFDGSLLDTEQE 469 Query: 99 CTIQEW--NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 + + + KI + S G+NL Y +I+ + + W L +Q RI Q Sbjct: 470 AMVGNFAKEDSKISVF-ISSDSGSQGVNLHYYCHIMFNYDIPWSLITLEQRNGRIDRYGQ 528 Query: 157 RQAGFKRAVFVYYLIAQNTIDE------LVLQRLRTK-STIQDLLLNAL 198 +Q R V +YYL+ + T DE ++ +L K + D L +A+ Sbjct: 529 KQ----RPV-IYYLVNK-TNDEGLRSDFTIIDKLLHKEQEVHDTLGDAM 571 >gi|296805275|ref|XP_002843462.1| ATP-dependent DNA helicase [Arthroderma otae CBS 113480] gi|238844764|gb|EEQ34426.1| ATP-dependent DNA helicase [Arthroderma otae CBS 113480] Length = 1469 Score = 55.3 bits (132), Expect = 5e-06, Method: Composition-based stats. Identities = 31/143 (21%), Positives = 49/143 (34%), Gaps = 12/143 (8%) Query: 68 AAPIIVAYHFNSDLARLQKAF---PQGRTLDKDPCTIQEWNEGKI-PLLFAHPASCGHGL 123 A IV L L +AF G + P I+ + E H + GL Sbjct: 1219 GAKSIVFSQDKEFLGILSQAFYRFKIGYSSIDTPFGIERFKEDHTKECFLLHAKAHASGL 1278 Query: 124 NLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQR 183 NL + + + Q I R+ + G + V+ + NT++E + Q Sbjct: 1279 NLVNATH-VFLCEPLINTAIELQAIARV-----HRIGQHQDTTVWMYLVANTVEESIYQI 1332 Query: 184 --LRTKSTIQDLLLNALKKETIH 204 R I +LKK+ H Sbjct: 1333 SVARRLEHIAQRREESLKKQEKH 1355 >gi|308803538|ref|XP_003079082.1| Helicase-like transcription factor HLTF/DNA helicase RAD5, DEAD-box superfamily (ISS) [Ostreococcus tauri] gi|116057536|emb|CAL51963.1| Helicase-like transcription factor HLTF/DNA helicase RAD5, DEAD-box superfamily (ISS) [Ostreococcus tauri] Length = 2061 Score = 55.3 bits (132), Expect = 5e-06, Method: Composition-based stats. Identities = 31/185 (16%), Positives = 62/185 (33%), Gaps = 24/185 (12%) Query: 12 YCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPI 71 + A + ++ + +G V K I ++ I + I Sbjct: 1876 CATRDSSVVTAVSLGTEVGAKAGMTDGGVGVHGSKI--------IDLVKHIKSVPDDERI 1927 Query: 72 IVAYHFNSDLARLQKAFPQGRTL--------DKDPCTIQEWNEGKIP------LLFAHPA 117 +V F + ++ A + + + E+ + + LL Sbjct: 1928 LVFVQFPDLMLQVSNALNEAGIKTLKLKGSVHQQTGALDEFQKENLKKDDARVLLLLSRD 1987 Query: 118 SCGHGLNLQYGGN-ILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTI 176 G NL + I V L +E+ E + R R+ G +R V ++ IA+++I Sbjct: 1988 ESASGANLTTANHAIFVHPLLTNSAQEYI-ASETQAIGRIRRYGQQREVRIWRFIARDSI 2046 Query: 177 DELVL 181 D +L Sbjct: 2047 DSEIL 2051 >gi|322411801|gb|EFY02709.1| SNF2 family protein [Streptococcus dysgalactiae subsp. dysgalactiae ATCC 27957] Length = 1826 Score = 55.3 bits (132), Expect = 5e-06, Method: Composition-based stats. Identities = 20/88 (22%), Positives = 35/88 (39%), Gaps = 4/88 (4%) Query: 90 QGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIE 149 T +K ++ N G++ +L A G GLN+Q + + W + Q Sbjct: 1733 DANTDEKKNSLSRKVNSGEVRILIASTEKGGTGLNVQSRMKAVHHLDVPWRPSDIVQRNG 1792 Query: 150 RIGVTRQRQAGFKRAVFVYYLIAQNTID 177 R+ RQ V +Y+ I + + D Sbjct: 1793 RLI----RQGNMHNEVDIYHYITKGSFD 1816 >gi|294656835|ref|XP_459156.2| DEHA2D15488p [Debaryomyces hansenii CBS767] gi|199431779|emb|CAG87327.2| DEHA2D15488p [Debaryomyces hansenii] Length = 1346 Score = 55.3 bits (132), Expect = 5e-06, Method: Composition-based stats. Identities = 23/152 (15%), Positives = 44/152 (28%), Gaps = 19/152 (12%) Query: 47 HWKEVHDEKIKALEV-IIEKANAA-PIIVAYHFNSDLARLQKAFPQGRTL---------- 94 K+ L ++E +V + F L + Sbjct: 1044 RILGTASAKLSYLASRLLEHQQEKIKSLVFFEFEDSAYYLTELLEVLGIKYILYATFINP 1103 Query: 95 -DKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGV 153 + + N L HGL + + F + W Q I+R Sbjct: 1104 SQRTNNLAEFSNFPGGVTLIMDLRLASHGLTI-ISATRVYFINPVWQRSIEAQAIKR--- 1159 Query: 154 TRQRQAGFKRAVFVYYLIAQNTIDELVLQRLR 185 + G + V+V L+ + T++E + +R Sbjct: 1160 --AHRIGQTKDVYVETLVLKGTLEEEIYRRRS 1189 >gi|320584136|gb|EFW98347.1| DNA-dependent ATPase of the nucleotide excision repair factor 4 complex [Pichia angusta DL-1] Length = 1082 Score = 55.3 bits (132), Expect = 5e-06, Method: Composition-based stats. Identities = 35/169 (20%), Positives = 59/169 (34%), Gaps = 26/169 (15%) Query: 47 HWKEVHDEKIKALEV-IIE-KANAAPIIVAYHFNSDLARLQKAFP-------------QG 91 K+ L ++E + IV Y F + L + + Sbjct: 799 RILGTASVKLSYLTSRLLENQTVGIKSIVFYEFENSAYYLTELLDLLGMNYLMYSTYVKI 858 Query: 92 RTLDKDPCTIQEWN---EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMI 148 + W+ G I +L HGL + N + F + W+ Q I Sbjct: 859 AERSNNLTKFDLWDTSVSGGI-VLVMDVKLASHGLTIISATN-VFFLNPIWNKTVEAQAI 916 Query: 149 ERIGVTRQRQAGFKRAVFVYYLIAQNTID-ELVLQRLRTKSTIQDLLLN 196 +R + G + V+V LI NTI+ E+ L+R +TK L++ Sbjct: 917 KR-----SHRIGQTKEVYVETLILDNTIEKEMYLKRSQTKVDETKELID 960 >gi|330933825|ref|XP_003304312.1| hypothetical protein PTT_16857 [Pyrenophora teres f. teres 0-1] gi|311319144|gb|EFQ87589.1| hypothetical protein PTT_16857 [Pyrenophora teres f. teres 0-1] Length = 605 Score = 55.3 bits (132), Expect = 5e-06, Method: Composition-based stats. Identities = 25/144 (17%), Positives = 55/144 (38%), Gaps = 17/144 (11%) Query: 64 EKANAAPIIVAYHFNS-----DLARLQKAFPQGR------TLDKDPCTIQEWNEGKIPLL 112 E + II+ F S D+A + + R DK+ ++ + +L Sbjct: 381 ECSQNTKIIIYSEFLSALDVADVALARVGYTTVRYDGWLSEKDKEVAKNGFLSDSIVDIL 440 Query: 113 FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIA 172 S G GLNL ++++ + W+ Q R + G + V V Y + Sbjct: 441 LMTIRSGGVGLNLPV-ASVVIHLTPCWNPALTVQCNSR-----AIRPGQLKFVQVVYFHS 494 Query: 173 QNTIDELVLQRLRTKSTIQDLLLN 196 ++++ ++ +K+ +++ Sbjct: 495 TDSLERVIRDIANSKAVKASEVID 518 >gi|117924655|ref|YP_865272.1| helicase domain-containing protein [Magnetococcus sp. MC-1] gi|117608411|gb|ABK43866.1| helicase domain protein [Magnetococcus sp. MC-1] Length = 954 Score = 55.3 bits (132), Expect = 5e-06, Method: Composition-based stats. Identities = 21/100 (21%), Positives = 40/100 (40%), Gaps = 11/100 (11%) Query: 96 KDPCTIQEWNEGKIPL-LFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 + ++ + + + P+ L G+NL Y + ++ F + W L QQ RI Sbjct: 489 EQQQVVEAFGKDEEPVRLLIASDVASEGINLHYLCHRMIHFDIPWSLMVFQQRNGRID-- 546 Query: 155 RQRQAGFKRAVFVYYLIA---QNTI--DELVLQRLRTKST 189 + G ++ + YL + I D +L+ L K Sbjct: 547 ---RYGQEQTPHIVYLTTNSQNDKIRGDMRILELLIQKDE 583 >gi|331243368|ref|XP_003334327.1| hypothetical protein PGTG_16196 [Puccinia graminis f. sp. tritici CRL 75-36-700-3] gi|309313317|gb|EFP89908.1| hypothetical protein PGTG_16196 [Puccinia graminis f. sp. tritici CRL 75-36-700-3] Length = 55 Score = 55.3 bits (132), Expect = 5e-06, Method: Composition-based stats. Identities = 14/56 (25%), Positives = 24/56 (42%), Gaps = 5/56 (8%) Query: 137 LWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQD 192 W+ Q +R+ + G K+ V V++ I TI+E +L K + D Sbjct: 3 PHWNPTVEAQAFDRL-----HRIGQKKTVQVFHFITPKTIEEKILIVQNRKKQLTD 53 >gi|282900231|ref|ZP_06308184.1| Helicase-like protein [Cylindrospermopsis raciborskii CS-505] gi|281194873|gb|EFA69817.1| Helicase-like protein [Cylindrospermopsis raciborskii CS-505] Length = 1019 Score = 55.3 bits (132), Expect = 5e-06, Method: Composition-based stats. Identities = 29/175 (16%), Positives = 61/175 (34%), Gaps = 19/175 (10%) Query: 16 QGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAY 75 + N A N + ++ QLA + + + V + K+ L+ ++ + + ++ Sbjct: 527 EDSNFIADNG--EILELTQLALELLSFSDANGQPGVENAKLDWLKGMLNRDPESKFLIFT 584 Query: 76 HFNSDLARLQKAFPQGR-------TLDKDPCTIQEW----NEGKIPLLFAHPASCGHGLN 124 + KA P +L + T+ G + ++ G + Sbjct: 585 ESLQTCEIIIKALPGYSGKLTGDMSLSQREDTVARLRGLGERGSNIRVLVATSAADEGFD 644 Query: 125 LQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 Q N ++ + L + Q R+ + G V YYLI +T +E Sbjct: 645 FQT-ANRVIHWDLTPNPAVLMQRNGRVA-----RLGQISDVIAYYLIIADTHEEK 693 >gi|239827429|ref|YP_002950053.1| SNF2-related protein [Geobacillus sp. WCH70] gi|239807722|gb|ACS24787.1| SNF2-related protein [Geobacillus sp. WCH70] Length = 964 Score = 55.3 bits (132), Expect = 5e-06, Method: Composition-based stats. Identities = 29/107 (27%), Positives = 49/107 (45%), Gaps = 9/107 (8%) Query: 92 RTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERI 151 RT D ++ + E K ++ A S G+NLQ+ +++V + L W+ + +Q I R Sbjct: 494 RTADMRAALVEHFRE-KAEIMIA-TESAAEGVNLQF-CSLVVNYDLPWNPQRIEQRIGRC 550 Query: 152 GVTRQRQAGFKRAVFVYYLIAQ-NTIDELVLQRLRTKSTIQDLLLNA 197 + G K V V + Q N D+ V + L K + +L A Sbjct: 551 -----HRYGQKHDVVVINFLNQRNEADQRVYELLEQKFNLFTGVLGA 592 >gi|309791645|ref|ZP_07686137.1| helicase [Oscillochloris trichoides DG6] gi|308226267|gb|EFO80003.1| helicase [Oscillochloris trichoides DG6] Length = 1041 Score = 54.9 bits (131), Expect = 5e-06, Method: Composition-based stats. Identities = 29/150 (19%), Positives = 59/150 (39%), Gaps = 27/150 (18%) Query: 51 VHDEKIKALEVIIEKA----NAAPIIVAYHFNSDLARLQKAF---------PQGRTLDKD 97 D K+ AL+ ++ + ++V F L L + GR D+D Sbjct: 514 DADPKLNALDRLVSETLAGEGPGKLLVFSFFIHTLNYLLQRLRTAGVRVELITGRVADED 573 Query: 98 PCTIQEW------NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERI 151 +++ + I +L + GL+ ++ + LV + + W+ +Q I RI Sbjct: 574 REHLRDRFRLPRSHSKAIDVLLSS-EVGCEGLDYEF-CDRLVNYDIPWNPMRIEQRIGRI 631 Query: 152 GVTRQRQAGFKRA-VFVYYLIAQNTIDELV 180 + G K V ++ + +T++E V Sbjct: 632 D-----RFGQKSPKVKIFNFVTPDTVEERV 656 >gi|108762887|ref|YP_632846.1| helicase/SNF2 domain-containing protein [Myxococcus xanthus DK 1622] gi|108466767|gb|ABF91952.1| helicase/SNF2 domain protein [Myxococcus xanthus DK 1622] Length = 907 Score = 54.9 bits (131), Expect = 6e-06, Method: Composition-based stats. Identities = 24/109 (22%), Positives = 45/109 (41%), Gaps = 9/109 (8%) Query: 90 QGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIE 149 T + ++E+ + + GLNLQ+ N++V + L W+ + +Q I Sbjct: 474 DAGTPEDRRALVEEFRHRTQ--ILICTEAGAEGLNLQF-CNLVVNYDLPWNPQRVEQRIG 530 Query: 150 RIGVTRQRQAGFKRAVFVYYLIAQ-NTIDELVLQRLRTKSTIQDLLLNA 197 R + G +R V V + + N D + + L K + D + A Sbjct: 531 RC-----HRYGQQRDVLVINFLNRMNAADARLFELLEKKLNLFDGVFGA 574 >gi|325117137|emb|CBZ52689.1| putative DNA excision repair protein [Neospora caninum Liverpool] Length = 1357 Score = 54.9 bits (131), Expect = 6e-06, Method: Composition-based stats. Identities = 19/111 (17%), Positives = 33/111 (29%), Gaps = 21/111 (18%) Query: 87 AFPQGRTLDKDPCTIQEWNEGK-IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQ 145 G + + + I L G GLNL Sbjct: 975 RLDGGVPVASRHAIVDRFQRDSSIFALLLTTRVGGVGLNLT------------------- 1015 Query: 146 QMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 +R+ R + G + V +Y L+ +++E V R K + +L Sbjct: 1016 -AADRVARERSWRIGQSKDVCIYRLLTSGSMEEKVYHRQVFKFFLSQKVLQ 1065 >gi|161789119|ref|YP_001595675.1| SNF2 family protein [Vibrio sp. 0908] gi|161761405|gb|ABX77050.1| SNF2 family protein [Vibrio sp. 0908] Length = 2349 Score = 54.9 bits (131), Expect = 6e-06, Method: Composition-based stats. Identities = 25/102 (24%), Positives = 40/102 (39%), Gaps = 5/102 (4%) Query: 102 QEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGF 161 +N G I ++ + G+NLQ G + + +L W QQ R RQ Sbjct: 1701 DSYNAGDIKIVICN-KKAEVGVNLQKGTSAIHHLTLPWTPASIQQRNGR----GVRQGNT 1755 Query: 162 KRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETI 203 V +YY + + + D L L K + L N + E + Sbjct: 1756 ASKVSLYYYLGKGSFDGYRLDLLNKKKSWMRDLFNGTESEAV 1797 >gi|257879433|ref|ZP_05659086.1| conserved hypothetical protein [Enterococcus faecium 1,230,933] gi|323142564|ref|ZP_08077380.1| helicase C-terminal domain protein [Phascolarctobacterium sp. YIT 12067] gi|257813661|gb|EEV42419.1| conserved hypothetical protein [Enterococcus faecium 1,230,933] gi|322412997|gb|EFY03900.1| helicase C-terminal domain protein [Phascolarctobacterium sp. YIT 12067] Length = 2776 Score = 54.9 bits (131), Expect = 6e-06, Method: Composition-based stats. Identities = 34/171 (19%), Positives = 55/171 (32%), Gaps = 26/171 (15%) Query: 30 VKCLQLA-NGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPI--IVAYHFNSDLARLQK 86 K QL + + D K K + AN P + H A+ + Sbjct: 2354 DKLTQLVFCDLSTPKNDGTFNVYDDVKTKLI------ANGVPAEEVAFIHDADTEAKKKD 2407 Query: 87 AFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 F + RT G++ +L G G N+Q + + W + Q Sbjct: 2408 LFAKVRT-------------GQVRVLLGSTQKMGAGTNVQDKLVAVHHLDVGWRPSDMTQ 2454 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 RI RQ + V VY + + T D + Q L K ++ + Sbjct: 2455 RNGRII----RQGNRNKEVQVYQYVTEGTFDAYLYQTLENKQKFISQIMTS 2501 >gi|309811323|ref|ZP_07705110.1| SNF2 family N-terminal domain protein [Dermacoccus sp. Ellin185] gi|308434630|gb|EFP58475.1| SNF2 family N-terminal domain protein [Dermacoccus sp. Ellin185] Length = 842 Score = 54.9 bits (131), Expect = 6e-06, Method: Composition-based stats. Identities = 23/106 (21%), Positives = 47/106 (44%), Gaps = 11/106 (10%) Query: 94 LDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIG 152 +D+ + + EG I + + G+NLQ+ ++L+ + L W+ + +Q I R+ Sbjct: 496 VDRRKALVDYFRTEGTIMIA---TEAAAEGINLQF-CSMLINYDLPWNPQRVEQRIGRV- 550 Query: 153 VTRQRQAGFKRAVFVYYLIAQNTI-DELVLQRLRTKSTIQDLLLNA 197 + G K V V + I ++ +L+ L K + + A Sbjct: 551 ----HRFGQKHNVVVVNFSNKGNIAEQRILELLTNKFQLFSSVFGA 592 >gi|168698695|ref|ZP_02730972.1| putative helicase SNF2 family protein [Gemmata obscuriglobus UQM 2246] Length = 1047 Score = 54.9 bits (131), Expect = 6e-06, Method: Composition-based stats. Identities = 25/100 (25%), Positives = 41/100 (41%), Gaps = 9/100 (9%) Query: 82 ARLQKAFPQGRTLDKDPCTIQEWNEGKI-PL-LFAHPASCGHGLNLQYGGNILVFFSLWW 139 RL + + +++ + I P+ L + GLNLQ L+ + + W Sbjct: 539 ERLMTMYGGMDSEEREEVKAAFQSAPDISPVRLLLATDAAAEGLNLQNHCYRLIHYEIPW 598 Query: 140 DLEEHQQMIERIGVTRQRQAGF-----KRAVFVYYLIAQN 174 + +Q RI R Q GF +R VFVY+ + Q Sbjct: 599 NPNRLEQRNGRI--DRHGQKGFLADSGERQVFVYHFVGQG 636 >gi|160944382|ref|ZP_02091610.1| hypothetical protein FAEPRAM212_01892 [Faecalibacterium prausnitzii M21/2] gi|158444164|gb|EDP21168.1| hypothetical protein FAEPRAM212_01892 [Faecalibacterium prausnitzii M21/2] Length = 2409 Score = 54.9 bits (131), Expect = 6e-06, Method: Composition-based stats. Identities = 23/107 (21%), Positives = 41/107 (38%), Gaps = 4/107 (3%) Query: 91 GRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 T +K + G++ +L A G G N+Q + + W + Q R Sbjct: 2026 ADTENKKAELFSKVRSGQVRVLLGSTAKMGAGTNVQTLLVAVHHLDVGWRPSDMTQRNGR 2085 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 I RQ + V+VY + ++T D + Q L K ++ + Sbjct: 2086 II----RQGNQNKQVYVYNYVTESTFDAYLYQTLENKQKFISQIMTS 2128 >gi|328854882|gb|EGG04012.1| hypothetical protein MELLADRAFT_89725 [Melampsora larici-populina 98AG31] Length = 145 Score = 54.9 bits (131), Expect = 6e-06, Method: Composition-based stats. Identities = 13/99 (13%), Positives = 35/99 (35%), Gaps = 6/99 (6%) Query: 83 RLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLE 142 R + T ++ + + + G GLN+ + + W+ + Sbjct: 9 RFCQLHGNMSTFERTCQLNPFTKDPVVEAFVVLIEAGGVGLNMTC-ADEVYLMDAHWNPQ 67 Query: 143 EHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVL 181 QQ ++ + G R V ++++ +I++ + Sbjct: 68 VVQQAVDHL-----HHIGQTRPVRAFHVVTGQSIEQHLY 101 >gi|313897139|ref|ZP_07830684.1| helicase C-terminal domain protein [Clostridium sp. HGF2] gi|312958067|gb|EFR39690.1| helicase C-terminal domain protein [Clostridium sp. HGF2] Length = 461 Score = 54.9 bits (131), Expect = 6e-06, Method: Composition-based stats. Identities = 31/152 (20%), Positives = 63/152 (41%), Gaps = 16/152 (10%) Query: 49 KEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD------PCTIQ 102 K+ DE+++ + I ++ +N++ + L KA + + + Sbjct: 280 KQSLDERVEMAKNI--ARTKENCLIWCDYNNESSALHKAIRESVEVKGSDTPEHKEKAMM 337 Query: 103 EWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFK 162 + G + L P+ CG G+N Q + ++F L E+ Q I R + G K Sbjct: 338 GFASGDVKYLVTKPSICGFGMNWQN-CHDMIFCGLSDSYEQFYQAIRRC-----YRFGQK 391 Query: 163 RAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 V V+ +I++ + VL ++ K T + + Sbjct: 392 HEVNVHVIISEK--EMNVLNNIKRKQTDHERM 421 >gi|257438349|ref|ZP_05614104.1| N-domain protein, SNF2 family [Faecalibacterium prausnitzii A2-165] gi|257199180|gb|EEU97464.1| N-domain protein, SNF2 family [Faecalibacterium prausnitzii A2-165] Length = 2422 Score = 54.9 bits (131), Expect = 6e-06, Method: Composition-based stats. Identities = 23/107 (21%), Positives = 41/107 (38%), Gaps = 4/107 (3%) Query: 91 GRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 T +K + G++ +L A G G N+Q + + W + Q R Sbjct: 2033 ADTENKKAELFSKVRSGQVRVLLGSTAKMGAGTNVQTLLVAVHHLDVGWRPSDMTQRNGR 2092 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 I RQ + V+VY + ++T D + Q L K ++ + Sbjct: 2093 II----RQGNQNKQVYVYNYVTESTFDAYLYQTLENKQKFISQIMTS 2135 >gi|299748682|ref|XP_001839314.2| hypothetical protein CC1G_13355 [Coprinopsis cinerea okayama7#130] gi|298408087|gb|EAU82504.2| hypothetical protein CC1G_13355 [Coprinopsis cinerea okayama7#130] Length = 1191 Score = 54.9 bits (131), Expect = 6e-06, Method: Composition-based stats. Identities = 30/161 (18%), Positives = 50/161 (31%), Gaps = 39/161 (24%) Query: 68 AAPIIVAYHFNSDLARLQKAFP----------QGRT-LDKDPCTIQEWNEGKIPLLFAHP 116 +I+ F +A +Q F QGR + + ++N+ + Sbjct: 391 DKKVIIFQEFTYCMALVQNIFKLYGMNKPLIIQGRHSFKQRASIVDKFNKDPNHRVLIFS 450 Query: 117 ASCGHGLNLQYGGNILVFF----------------------SLWWDLEEHQQMIERIGVT 154 GLNL +I++F W ++ Q+I R Sbjct: 451 KVGSTGLNLTR-ASIVIFLVRTSLHFLSNAAIHPLNPNPPKDQPWSAQDEWQIIGRAYRQ 509 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 R + V V L+A NT D + R K + D Sbjct: 510 R-----QSKPVTVIQLLAANTADITLSLLARGKKDMLDAFF 545 >gi|240169377|ref|ZP_04748036.1| helicase domain-containing protein [Mycobacterium kansasii ATCC 12478] Length = 955 Score = 54.9 bits (131), Expect = 6e-06, Method: Composition-based stats. Identities = 34/155 (21%), Positives = 52/155 (33%), Gaps = 24/155 (15%) Query: 52 HDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTL--------------- 94 D K+K L ++++ A IV F L + T Sbjct: 467 SDAKLKRLVPLVKELIAEGYHPIVFCRFIPTADYLAEHLRTALTRIPDLQIDAVTGNLAP 526 Query: 95 DKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 ++ + P L G+NLQ G +V + L W+ H+Q RI Sbjct: 527 EEREERVDALTAHDGPRLLIATDCLSEGINLQEGFTAVVHYDLAWNPTRHEQREGRID-- 584 Query: 155 RQRQAGFKRAV--FVYYLIAQNTIDELVLQRLRTK 187 + G V V Y N ID +VL+ L + Sbjct: 585 ---RFGQGAPVVRTVTYFGEDNGIDGIVLEVLIRR 616 >gi|119357747|ref|YP_912391.1| helicase domain-containing protein [Chlorobium phaeobacteroides DSM 266] gi|119355096|gb|ABL65967.1| helicase domain protein [Chlorobium phaeobacteroides DSM 266] Length = 967 Score = 54.9 bits (131), Expect = 6e-06, Method: Composition-based stats. Identities = 24/101 (23%), Positives = 44/101 (43%), Gaps = 8/101 (7%) Query: 98 PCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 I +W + ++ A + G+NLQ+ +++V + L W+ + +Q I R Sbjct: 493 RQAIVDWFRNEATIMIA-TEAAAEGINLQF-CSLVVNYDLPWNPQRIEQRIGRC-----H 545 Query: 158 QAGFKRAVFVYYLIAQ-NTIDELVLQRLRTKSTIQDLLLNA 197 + G K V V + + N D+ V Q L K + + A Sbjct: 546 RYGQKFDVVVINFLNKANAADQRVYQLLDQKFKLFSGVFGA 586 >gi|218297348|ref|ZP_03497964.1| DEAD-like helicase [Thermus aquaticus Y51MC23] gi|218242337|gb|EED08881.1| DEAD-like helicase [Thermus aquaticus Y51MC23] Length = 680 Score = 54.9 bits (131), Expect = 6e-06, Method: Composition-based stats. Identities = 27/139 (19%), Positives = 50/139 (35%), Gaps = 20/139 (14%) Query: 56 IKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAH 115 + L I+E + PI++ R +A+ + + +L H Sbjct: 465 LSRLASILEAEDFRPIVLRADTVRPEER--EAWLKAQVEKGG------------DVLLCH 510 Query: 116 PASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNT 175 P GL+L + L+F+ + + +Q R + G K V V Y+ + T Sbjct: 511 PRVVQTGLDLVE-FSTLIFYQPEYSVYTLRQAARRSW-----RIGQKEPVRVVYMAYRGT 564 Query: 176 IDELVLQRLRTKSTIQDLL 194 + E L + K+ L Sbjct: 565 LQEAALVLIAQKARSSLAL 583 >gi|320104893|ref|YP_004180484.1| helicase domain-containing protein [Isosphaera pallida ATCC 43644] gi|319752175|gb|ADV63935.1| helicase domain protein [Isosphaera pallida ATCC 43644] Length = 1166 Score = 54.9 bits (131), Expect = 6e-06, Method: Composition-based stats. Identities = 37/215 (17%), Positives = 68/215 (31%), Gaps = 32/215 (14%) Query: 14 DLQGENIEAFNSAS----------KTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVII 63 L+ ++ +A K Q A V +++ W E+ ++ Sbjct: 435 SLEENLVDQATAAKTITELEAEIDILTKLEQQARAVVTSGQDRKWDELSKLLQNNPQMHD 494 Query: 64 EKANAAPIIVAYHFNSDLARLQKAFPQ-------------GRTLDKDPCTIQEWNEGKIP 110 E II+ L L G D + Sbjct: 495 ESGRQRKIIIFSEHRDTLNYLHAKIAGVLGNANAIVTIHGGINRDDRLRIQALFRSDPEV 554 Query: 111 LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYL 170 + + G G+NLQ +++V + L W+ +Q RI + G ++ L Sbjct: 555 RVLVATDAAGEGVNLQC-AHLMVNYDLPWNPNRLEQRFGRI-----HRIGQTEVCHLWSL 608 Query: 171 IAQNTIDELVLQRLRTKSTIQDLLLNALKKETIHV 205 +A+ T + V RL K + ALK + ++ Sbjct: 609 VAKETREGAVWYRLLEKIATE---CEALKGKVFNI 640 >gi|258646416|ref|ZP_05733885.1| conserved hypothetical protein [Dialister invisus DSM 15470] gi|260403819|gb|EEW97366.1| conserved hypothetical protein [Dialister invisus DSM 15470] Length = 482 Score = 54.9 bits (131), Expect = 6e-06, Method: Composition-based stats. Identities = 30/131 (22%), Positives = 58/131 (44%), Gaps = 15/131 (11%) Query: 80 DLARLQKAFPQGRTLDKDPCTIQE---WNEGKIPLLFAHPASCGHGLNLQYGGNILVFFS 136 +L R+ + + DK I ++ G + L P+ G G+N Q N ++F Sbjct: 330 ELHRVCNLSQEVKGADKATHKINAMTGFSVGLLKCLITKPSIAGFGMNWQNCRN-VIFVG 388 Query: 137 LWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIA--QNTIDELVLQRLRTKSTIQDLL 194 L E+ Q + R + G K+AV VY +I+ + + E + ++ ++D + Sbjct: 389 LSDSYEQFYQAVRRCW-----RFGQKKAVDVYIIISAKEGCVKENIERKEADSRKMRDAM 443 Query: 195 L----NALKKE 201 + A+K+E Sbjct: 444 ITLTKQAVKEE 454 >gi|255559737|ref|XP_002520888.1| snf2 histone linker phd ring helicase, putative [Ricinus communis] gi|223540019|gb|EEF41597.1| snf2 histone linker phd ring helicase, putative [Ricinus communis] Length = 1588 Score = 54.9 bits (131), Expect = 6e-06, Method: Composition-based stats. Identities = 27/141 (19%), Positives = 51/141 (36%), Gaps = 17/141 (12%) Query: 62 IIEKANAAPIIVAYHFNSDLARLQKAF----------PQGRTLDKDPCTIQEWNEGK-IP 110 I A ++V +N L L+ AF G + + K I Sbjct: 1394 IKSSDPEAKVLVFSSWNDVLDVLEHAFNANGITYIRMKGGSNTIGNHRVHSQKESPKPIQ 1453 Query: 111 LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYL 170 +L +GLNL + +V + Q I R+ + G + V+ Sbjct: 1454 VLMLLVQHGANGLNLLEAQH-VVLVEPLLNPAAETQAISRV-----HRIGQENRTLVHRF 1507 Query: 171 IAQNTIDELVLQRLRTKSTIQ 191 + +NT++E + + R+++T Sbjct: 1508 MVKNTVEESIYKLNRSRNTSS 1528 >gi|160942833|ref|ZP_02090073.1| hypothetical protein FAEPRAM212_00310 [Faecalibacterium prausnitzii M21/2] gi|158445885|gb|EDP22888.1| hypothetical protein FAEPRAM212_00310 [Faecalibacterium prausnitzii M21/2] Length = 1925 Score = 54.9 bits (131), Expect = 7e-06, Method: Composition-based stats. Identities = 23/107 (21%), Positives = 41/107 (38%), Gaps = 4/107 (3%) Query: 91 GRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 T +K + G++ +L A G G N+Q + + W + Q R Sbjct: 1536 ADTENKKAELFSKVRSGQVRVLLGSTAKMGAGTNVQTLLVAVHHLDVGWRPSDMTQRNGR 1595 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 I RQ + V+VY + ++T D + Q L K ++ + Sbjct: 1596 II----RQGNQNKQVYVYNYVTESTFDAYLYQTLENKQKFISQIMTS 1638 >gi|256079746|ref|XP_002576146.1| snf2 histone linker phd ring helicase [Schistosoma mansoni] gi|238661407|emb|CAZ32381.1| snf2 histone linker phd ring helicase, putative [Schistosoma mansoni] Length = 1587 Score = 54.9 bits (131), Expect = 7e-06, Method: Composition-based stats. Identities = 29/146 (19%), Positives = 49/146 (33%), Gaps = 21/146 (14%) Query: 47 HWKEVHDEKIKA----LEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD----- 97 + H K++A L+VI + A IV + S L L A Q Sbjct: 1367 NIVGDHSTKVRAVIQRLKVIKREDPDAKAIVFSSWLSVLVTLAGALDQNGLAYTTLFHAR 1426 Query: 98 ----PCTIQEWN--EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERI 151 P + + +L +GLNL N ++F Q + RI Sbjct: 1427 DACCPGRLAGFQCFGSTTWILLMPVQLGANGLNLT-SANHVLFVDPVLSHAREAQAVARI 1485 Query: 152 GVTRQRQAGFKRAVFVYYLIAQNTID 177 + G R V+ + +++I+ Sbjct: 1486 -----HRIGQTRPGVVHRFLVKDSIE 1506 >gi|310831496|ref|YP_003970139.1| putative superfamily II helicase [Cafeteria roenbergensis virus BV-PW1] gi|309386680|gb|ADO67540.1| putative superfamily II helicase [Cafeteria roenbergensis virus BV-PW1] Length = 737 Score = 54.9 bits (131), Expect = 7e-06, Method: Composition-based stats. Identities = 25/150 (16%), Positives = 57/150 (38%), Gaps = 9/150 (6%) Query: 36 ANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHF---NSDLARLQKAFPQGR 92 AN Y + ++ KI + I+ + + I+ F +L + Sbjct: 591 ANDFKYVNGADMFQ--TSSKISQIIKILNETDEK-FIIYTQFPEIVHNLVEILNKLNIKT 647 Query: 93 TLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIG 152 T+ K + ++ A + G++L Y N+++ F + + + E+ Sbjct: 648 TVLKKGSLVDF--SVDTRVVVASSTTESSGIDLTYFNNMII-FEPYVHNYLYMKSYEKQI 704 Query: 153 VTRQRQAGFKRAVFVYYLIAQNTIDELVLQ 182 + R + G + V+ LI+ +TI+ + Sbjct: 705 IGRINRIGQTKHCNVHRLISTDTIESDIYA 734 >gi|307249912|ref|ZP_07531886.1| hypothetical protein appser4_7100 [Actinobacillus pleuropneumoniae serovar 4 str. M62] gi|306858101|gb|EFM90183.1| hypothetical protein appser4_7100 [Actinobacillus pleuropneumoniae serovar 4 str. M62] Length = 955 Score = 54.9 bits (131), Expect = 7e-06, Method: Composition-based stats. Identities = 28/106 (26%), Positives = 50/106 (47%), Gaps = 9/106 (8%) Query: 93 TLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIG 152 +DK I+ + E K ++ A + G+NLQ+ ++L+ + L W+ + +Q I R Sbjct: 492 EVDKRSALIEHFKE-KAQIMIA-TEAASEGVNLQF-CSLLINYDLPWNPQRVEQRIGRC- 547 Query: 153 VTRQRQAGFKRAVFVYYLIAQ-NTIDELVLQRLRTKSTIQDLLLNA 197 + G K V V + + N D+ VL+ L K + +L A Sbjct: 548 ----HRYGQKFDVVVINFLNKRNVADQRVLELLTEKFKLFQGVLGA 589 >gi|331231674|ref|XP_003328500.1| homeotic regulator [Puccinia graminis f. sp. tritici CRL 75-36-700-3] gi|309307490|gb|EFP84081.1| homeotic regulator [Puccinia graminis f. sp. tritici CRL 75-36-700-3] Length = 53 Score = 54.9 bits (131), Expect = 7e-06, Method: Composition-based stats. Identities = 11/56 (19%), Positives = 25/56 (44%), Gaps = 5/56 (8%) Query: 137 LWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQD 192 W+ Q ++R+ + G + V+V++ + NTI+E ++ K + Sbjct: 3 PHWNPTVEAQAVDRL-----HRIGQTKKVWVFHFVTPNTIEEKIIHVQNKKKQLAQ 53 >gi|255719067|ref|XP_002555814.1| KLTH0G18150p [Lachancea thermotolerans] gi|238937198|emb|CAR25377.1| KLTH0G18150p [Lachancea thermotolerans] Length = 1554 Score = 54.9 bits (131), Expect = 7e-06, Method: Composition-based stats. Identities = 23/130 (17%), Positives = 49/130 (37%), Gaps = 16/130 (12%) Query: 64 EKANAAP--IIVAYHFNSDLARLQKAFPQGRTL-------DKDPCTIQEWN-EGKIPLLF 113 E ++ P II+ ++ L L K Q L K ++++ + L Sbjct: 1357 ESSSDPPPQIIIYSQYSEFLNLLSKVLKQHSVLHCNTAGAGKFSKMVEKFKKNPDVTCLL 1416 Query: 114 AHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQ 173 + GL L ++ + + + QQ I R + G R V+ + + Sbjct: 1417 LNVTRQATGLTLVNATHVFIM-DPIMNTSDEQQAINR-----THRIGQTRETHVWNFVVR 1470 Query: 174 NTIDELVLQR 183 NT+++ +++ Sbjct: 1471 NTVEQNIVRL 1480 >gi|123467717|ref|XP_001317270.1| Type III restriction enzyme, res subunit family protein [Trichomonas vaginalis G3] gi|121900000|gb|EAY05047.1| Type III restriction enzyme, res subunit family protein [Trichomonas vaginalis G3] Length = 904 Score = 54.9 bits (131), Expect = 7e-06, Method: Composition-based stats. Identities = 25/152 (16%), Positives = 53/152 (34%), Gaps = 18/152 (11%) Query: 57 KALEVIIEKANAAPIIVAYHFNSDLARLQK---------AFPQGRTLDKDPCTI-QEWN- 105 + I+ N I+ H L + + G T K+ + ++ Sbjct: 753 QKFRDILFCQNRK-ILFFAHHTVMLKGISEWLTFRNIDHILINGETSMKNRKILLDKFKS 811 Query: 106 EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 E + + + G+ L +++VF L + R + G + V Sbjct: 812 EPECKIAVLGIETISAGVTLVE-ASVVVFAEL-----MYVPATHLQAEDRVHRIGQTQPV 865 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 +YYL A ++D+ V + L K + ++ + Sbjct: 866 DIYYLHAPGSVDDRVWEILERKLEVLGSVITS 897 >gi|9633897|ref|NP_051975.1| gp086L [Rabbit fibroma virus] gi|11134120|sp|Q9Q8Z2|NTP1_RFVKA RecName: Full=Nucleoside triphosphatase I; AltName: Full=Nucleoside triphosphate phosphohydrolase I; Short=NPH I gi|6578616|gb|AAF17970.1|AF170722_88 gp086L [Rabbit fibroma virus] Length = 632 Score = 54.9 bits (131), Expect = 7e-06, Method: Composition-based stats. Identities = 36/201 (17%), Positives = 74/201 (36%), Gaps = 19/201 (9%) Query: 16 QGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKAN-AAPIIVA 74 +G+++ +SA +L + + + K E + ++ ++ Sbjct: 342 KGQSLNGTSSADDISFLNELREHSCKFTDVCLRILASPGKCLVFEPFVNQSGINILLLYF 401 Query: 75 YHFNSDLARLQKAFPQGRTLDKDPCTIQEWN-----EGKIPLLFAHPASCGHGLNLQYGG 129 FN + RT + ++ E+N G + S G G++ Sbjct: 402 SAFN-----ISYIEFSSRTKNTRVQSVAEFNKRENTNGDLIKTCVFSLSGGEGISFFSIN 456 Query: 130 NILVFFSLWWDLEEHQQMIERIGVTRQR--QAGFKRAVFVYYLIAQ-----NTIDELVLQ 182 +I + + W+ +Q+I R +R V+V+++IA+ T+DE +L Sbjct: 457 DIFIL-DMTWNEASLRQIIGRAIRLNSHVLTPEHRRYVYVHFIIARLSNGDPTVDEDLLD 515 Query: 183 RLRTKSTIQDLLLNALKKETI 203 +R KS L K +I Sbjct: 516 IIRNKSKEFTQLFKVFKHTSI 536 >gi|115522588|ref|YP_779499.1| SNF2-related protein [Rhodopseudomonas palustris BisA53] gi|115516535|gb|ABJ04519.1| SNF2-related protein [Rhodopseudomonas palustris BisA53] Length = 963 Score = 54.9 bits (131), Expect = 7e-06, Method: Composition-based stats. Identities = 25/112 (22%), Positives = 50/112 (44%), Gaps = 8/112 (7%) Query: 87 AFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 A ++ D + + + +L A S G+NLQ+ ++L+ F L W+ + +Q Sbjct: 489 AVSGSKSADMKTAIVNAFKSDEKTILIA-TESGAEGINLQF-CSLLINFDLPWNPQRVEQ 546 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIA-QNTIDELVLQRLRTKSTIQDLLLNA 197 I R + G K V V ++ +N ++ + + L+ K + + L A Sbjct: 547 RIGRC-----HRYGQKIDVTVVNMLNRKNQAEKRIYELLKNKFNLFEGLFGA 593 >gi|190150014|ref|YP_001968539.1| ATP-dependent helicase [Actinobacillus pleuropneumoniae serovar 7 str. AP76] gi|189915145|gb|ACE61397.1| hypothetical ATP-dependent helicase [Actinobacillus pleuropneumoniae serovar 7 str. AP76] Length = 957 Score = 54.9 bits (131), Expect = 7e-06, Method: Composition-based stats. Identities = 36/139 (25%), Positives = 61/139 (43%), Gaps = 12/139 (8%) Query: 62 IIEKANAAPIIVAYHFNSDLARLQ--KAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASC 119 + N P VA + LAR Q + +DK I+ + E K ++ A + Sbjct: 461 LFSGTNNDPNSVAI-YQDWLARYQGTEKITGSAEVDKRSALIEHFKE-KAQIMIA-TEAA 517 Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQ-NTIDE 178 G+NLQ+ ++L+ + L W+ + +Q I R + G K V V + + N D+ Sbjct: 518 SEGVNLQF-CSLLINYDLPWNPQRVEQRIGRC-----HRYGQKFDVVVINFLNKRNLADQ 571 Query: 179 LVLQRLRTKSTIQDLLLNA 197 VL+ L K + +L A Sbjct: 572 RVLELLTEKFKLFQGVLGA 590 >gi|153003482|ref|YP_001377807.1| type III restriction protein res subunit [Anaeromyxobacter sp. Fw109-5] gi|152027055|gb|ABS24823.1| type III restriction protein res subunit [Anaeromyxobacter sp. Fw109-5] Length = 905 Score = 54.9 bits (131), Expect = 7e-06, Method: Composition-based stats. Identities = 32/191 (16%), Positives = 67/191 (35%), Gaps = 26/191 (13%) Query: 13 CDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKA--NAAP 70 L + ++ +++ ++ ++ GA + EK AL + + Sbjct: 350 LTLLAHLADRYSLSARLIRNRRVKVGAFTSRVLRRKDVGEGEKRAALVELCARLAKGGEK 409 Query: 71 IIVAYHFNSDLARLQKA-------------FPQGRTLDKDPCTIQEWNEGKIPLLFAHPA 117 ++V F DL L++ + +L+ + + + + P++ Sbjct: 410 VLV---FGHDLELLRELQAGIGGEGLEALLYDDAPSLEGRDRLVARFRDPEGPMVLLSGE 466 Query: 118 SCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 S G G N Q+ LV L +Q I R+ + G R V ++ ++ + Sbjct: 467 SGGEGRNFQF-ACQLVCADLPESPLVLEQRIGRLD-----RLGQHRPVEIHLVVEPG--E 518 Query: 178 ELVLQRLRTKS 188 E L L K Sbjct: 519 EAFLADLYEKE 529 >gi|53729198|ref|ZP_00348337.1| COG0553: Superfamily II DNA/RNA helicases, SNF2 family [Actinobacillus pleuropneumoniae serovar 1 str. 4074] gi|126208183|ref|YP_001053408.1| ATP-dependent helicase [Actinobacillus pleuropneumoniae L20] gi|126096975|gb|ABN73803.1| hypothetical ATP-dependent helicase [Actinobacillus pleuropneumoniae serovar 5b str. L20] Length = 956 Score = 54.9 bits (131), Expect = 7e-06, Method: Composition-based stats. Identities = 28/106 (26%), Positives = 50/106 (47%), Gaps = 9/106 (8%) Query: 93 TLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIG 152 +DK I+ + E K ++ A + G+NLQ+ ++L+ + L W+ + +Q I R Sbjct: 492 EVDKRSALIEHFKE-KAQIMIA-TEAASEGVNLQF-CSLLINYDLPWNPQRVEQRIGRC- 547 Query: 153 VTRQRQAGFKRAVFVYYLIAQ-NTIDELVLQRLRTKSTIQDLLLNA 197 + G K V V + + N D+ VL+ L K + +L A Sbjct: 548 ----HRYGQKFDVVVINFLNKRNVADQRVLELLTEKFKLFQGVLGA 589 >gi|313115905|ref|ZP_07801333.1| protein, SNF2 family [Faecalibacterium cf. prausnitzii KLE1255] gi|310621773|gb|EFQ05300.1| protein, SNF2 family [Faecalibacterium cf. prausnitzii KLE1255] Length = 1922 Score = 54.9 bits (131), Expect = 7e-06, Method: Composition-based stats. Identities = 23/107 (21%), Positives = 41/107 (38%), Gaps = 4/107 (3%) Query: 91 GRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 T +K + G++ +L A G G N+Q + + W + Q R Sbjct: 1535 ADTENKKAELFSKVRSGQVRVLLGSTAKMGAGTNVQTLLVAVHHLDVGWRPSDMTQRNGR 1594 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 I RQ + V+VY + ++T D + Q L K ++ + Sbjct: 1595 II----RQGNQNKQVYVYNYVTESTFDAYLYQTLENKQKFISQIMTS 1637 >gi|307263345|ref|ZP_07544963.1| hypothetical protein appser13_7640 [Actinobacillus pleuropneumoniae serovar 13 str. N273] gi|306871407|gb|EFN03133.1| hypothetical protein appser13_7640 [Actinobacillus pleuropneumoniae serovar 13 str. N273] Length = 957 Score = 54.6 bits (130), Expect = 7e-06, Method: Composition-based stats. Identities = 35/139 (25%), Positives = 61/139 (43%), Gaps = 12/139 (8%) Query: 62 IIEKANAAPIIVAYHFNSDLARLQ--KAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASC 119 + N P VA + LAR Q + +D+ I+ + E K ++ A + Sbjct: 461 LFSGTNNDPNSVAI-YQDWLARYQGTEKITGSAEVDRRSALIEHFKE-KAQIMIA-TEAA 517 Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQ-NTIDE 178 G+NLQ+ ++L+ + L W+ + +Q I R + G K V V + + N D+ Sbjct: 518 SEGVNLQF-CSLLINYDLPWNPQRVEQRIGRC-----HRYGQKFDVVVINFLNKRNLADQ 571 Query: 179 LVLQRLRTKSTIQDLLLNA 197 VL+ L K + +L A Sbjct: 572 RVLELLTEKFKLFQGVLGA 590 >gi|297733908|emb|CBI15155.3| unnamed protein product [Vitis vinifera] Length = 1201 Score = 54.6 bits (130), Expect = 7e-06, Method: Composition-based stats. Identities = 18/85 (21%), Positives = 33/85 (38%), Gaps = 6/85 (7%) Query: 94 LDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGV 153 D+ + + ++ + + G GL+ N +VF L Q +R Sbjct: 574 RDRQSAVLSFRSSTEVKIAIIGITAGGFGLDFSSAQN-VVFLELPQSPSIMLQAEDR--- 629 Query: 154 TRQRQAGFKRAVFVYYLIAQNTIDE 178 + G AV +Y A++T+DE Sbjct: 630 --AHRRGQTNAVNIYIFCAKDTMDE 652 >gi|225457289|ref|XP_002281382.1| PREDICTED: hypothetical protein [Vitis vinifera] Length = 1252 Score = 54.6 bits (130), Expect = 7e-06, Method: Composition-based stats. Identities = 18/85 (21%), Positives = 33/85 (38%), Gaps = 6/85 (7%) Query: 94 LDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGV 153 D+ + + ++ + + G GL+ N +VF L Q +R Sbjct: 572 RDRQSAVLSFRSSTEVKIAIIGITAGGFGLDFSSAQN-VVFLELPQSPSIMLQAEDR--- 627 Query: 154 TRQRQAGFKRAVFVYYLIAQNTIDE 178 + G AV +Y A++T+DE Sbjct: 628 --AHRRGQTNAVNIYIFCAKDTMDE 650 >gi|154315087|ref|XP_001556867.1| hypothetical protein BC1G_04885 [Botryotinia fuckeliana B05.10] gi|150848423|gb|EDN23616.1| hypothetical protein BC1G_04885 [Botryotinia fuckeliana B05.10] Length = 424 Score = 54.6 bits (130), Expect = 7e-06, Method: Composition-based stats. Identities = 19/163 (11%), Positives = 47/163 (28%), Gaps = 20/163 (12%) Query: 42 YDEEKHWKEVHDEKIKALEVIIEKANAAPI---IVAYHFNSDLARL-----------QKA 87 D K + ++++E + I+ + + + + Sbjct: 162 VDAGKSALPQSTKLASIRKLLLEWRKGTRLDKTIIFVQWKAMILLIGMMLEEDNFHFVYY 221 Query: 88 FPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQM 147 ++ N ++ ++ G GLN+ N + LWW+ Q Sbjct: 222 TGDMSKRNRANALDSFENMKEVTVMIMGLKVGGVGLNITC-ANRAIMVDLWWNQAIEMQA 280 Query: 148 IERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 RI + G + + + + D + K+ + Sbjct: 281 NARI-----YRIGQPKETHFRREVVRRSADIRLALTQLKKNAL 318 >gi|303250388|ref|ZP_07336586.1| ATP-dependent helicase [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|307252258|ref|ZP_07534155.1| hypothetical protein appser6_7760 [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|302650714|gb|EFL80872.1| ATP-dependent helicase [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|306860180|gb|EFM92196.1| hypothetical protein appser6_7760 [Actinobacillus pleuropneumoniae serovar 6 str. Femo] Length = 957 Score = 54.6 bits (130), Expect = 7e-06, Method: Composition-based stats. Identities = 36/139 (25%), Positives = 60/139 (43%), Gaps = 12/139 (8%) Query: 62 IIEKANAAPIIVAYHFNSDLARLQK--AFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASC 119 + N P VA + LAR Q +DK I+ + E K ++ A + Sbjct: 461 LFSGTNNDPNSVAI-YQDWLARYQGTAKITGSAEVDKRSALIEHFKE-KAQIMIA-TEAA 517 Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQ-NTIDE 178 G+NLQ+ ++L+ + L W+ + +Q I R + G K V V + + N D+ Sbjct: 518 SEGVNLQF-CSLLINYDLPWNPQRVEQRIGRC-----HRYGQKFDVVVINFLNKRNVADQ 571 Query: 179 LVLQRLRTKSTIQDLLLNA 197 VL+ L K + +L A Sbjct: 572 RVLELLTEKFKLFQGVLGA 590 >gi|303252378|ref|ZP_07338544.1| ATP-dependent helicase [Actinobacillus pleuropneumoniae serovar 2 str. 4226] gi|307247677|ref|ZP_07529718.1| hypothetical protein appser2_6710 [Actinobacillus pleuropneumoniae serovar 2 str. S1536] gi|302648837|gb|EFL79027.1| ATP-dependent helicase [Actinobacillus pleuropneumoniae serovar 2 str. 4226] gi|306855845|gb|EFM88007.1| hypothetical protein appser2_6710 [Actinobacillus pleuropneumoniae serovar 2 str. S1536] Length = 957 Score = 54.6 bits (130), Expect = 7e-06, Method: Composition-based stats. Identities = 28/106 (26%), Positives = 50/106 (47%), Gaps = 9/106 (8%) Query: 93 TLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIG 152 +DK I+ + E K ++ A + G+NLQ+ ++L+ + L W+ + +Q I R Sbjct: 493 EVDKRSALIEHFKE-KAQIMIA-TEAASEGVNLQF-CSLLINYDLPWNPQRVEQRIGRC- 548 Query: 153 VTRQRQAGFKRAVFVYYLIAQ-NTIDELVLQRLRTKSTIQDLLLNA 197 + G K V V + + N D+ VL+ L K + +L A Sbjct: 549 ----HRYGQKFDVVVINFLNKRNVADQRVLELLTEKFKLFQGVLGA 590 >gi|307245561|ref|ZP_07527648.1| hypothetical protein appser1_7650 [Actinobacillus pleuropneumoniae serovar 1 str. 4074] gi|307254516|ref|ZP_07536352.1| hypothetical protein appser9_7640 [Actinobacillus pleuropneumoniae serovar 9 str. CVJ13261] gi|307258973|ref|ZP_07540704.1| hypothetical protein appser11_7700 [Actinobacillus pleuropneumoniae serovar 11 str. 56153] gi|306853620|gb|EFM85838.1| hypothetical protein appser1_7650 [Actinobacillus pleuropneumoniae serovar 1 str. 4074] gi|306862566|gb|EFM94524.1| hypothetical protein appser9_7640 [Actinobacillus pleuropneumoniae serovar 9 str. CVJ13261] gi|306866997|gb|EFM98854.1| hypothetical protein appser11_7700 [Actinobacillus pleuropneumoniae serovar 11 str. 56153] Length = 957 Score = 54.6 bits (130), Expect = 7e-06, Method: Composition-based stats. Identities = 36/139 (25%), Positives = 60/139 (43%), Gaps = 12/139 (8%) Query: 62 IIEKANAAPIIVAYHFNSDLARLQK--AFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASC 119 + N P VA + LAR Q +DK I+ + E K ++ A + Sbjct: 461 LFSGTNNDPNSVAI-YQDWLARYQGTAKITGSAEVDKRSALIEHFKE-KAQIMIA-TEAA 517 Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQ-NTIDE 178 G+NLQ+ ++L+ + L W+ + +Q I R + G K V V + + N D+ Sbjct: 518 SEGVNLQF-CSLLINYDLPWNPQRVEQRIGRC-----HRYGQKFDVVVINFLNKRNVADQ 571 Query: 179 LVLQRLRTKSTIQDLLLNA 197 VL+ L K + +L A Sbjct: 572 RVLELLTEKFKLFQGVLGA 590 >gi|75907548|ref|YP_321844.1| SNF2-like helicase [Anabaena variabilis ATCC 29413] gi|75701273|gb|ABA20949.1| SNF2-related Helicase [Anabaena variabilis ATCC 29413] Length = 1082 Score = 54.6 bits (130), Expect = 7e-06, Method: Composition-based stats. Identities = 37/193 (19%), Positives = 61/193 (31%), Gaps = 39/193 (20%) Query: 36 ANGAVYYDEEKHWKEVHDEKIKALEVIIEKAN---AAPIIVAYHFNSDLARLQKAFPQ-- 90 AN A Y + + K V K + + +I+ + LQ+ + Sbjct: 481 ANQARYQADPRVEKLVAWIKQNLCPDLGKPNAAWLEKRVIIFTEYTDTKRYLQQKLQEAI 540 Query: 91 -GRTLDKDPCTIQEWNEGKIPLL---------------------------FAHPASCGHG 122 G ++D ++ N +I + + G Sbjct: 541 AGSDKERDSEALRR-NAERIDVFHGGIGEERREAIKNAFNADPLRHPLRILIATDAAREG 599 Query: 123 LNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQ 182 +NLQ L F + W+ +Q RI QR V YY + ++ VL+ Sbjct: 600 VNLQNNCADLFHFDVPWNPSRMEQRNGRIDRKLQR----SPIVHCYYFVLAQRTEDKVLK 655 Query: 183 RLRTK-STIQDLL 194 L K TIQ L Sbjct: 656 VLVKKTETIQKEL 668 >gi|171691588|ref|XP_001910719.1| hypothetical protein [Podospora anserina S mat+] gi|170945742|emb|CAP71855.1| unnamed protein product [Podospora anserina S mat+] Length = 381 Score = 54.6 bits (130), Expect = 7e-06, Method: Composition-based stats. Identities = 15/83 (18%), Positives = 29/83 (34%), Gaps = 7/83 (8%) Query: 96 KDPCTIQEW-NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 I + IP+L S GL + N++ ++ Q + R+ Sbjct: 297 DRTAIIDNFSTNPDIPVLLLTINSGAVGLTIT-AANVVHLVEPIYNPAIEAQAVARVL-- 353 Query: 155 RQRQAGFKRAVFVYYLIAQNTID 177 + G R V + + + TI+ Sbjct: 354 ---RMGQTRPVKILRYVTEETIE 373 >gi|325120317|emb|CBZ55871.1| putative helicase conserved C-terminal domain-containing protein [Neospora caninum Liverpool] Length = 2877 Score = 54.6 bits (130), Expect = 8e-06, Method: Composition-based stats. Identities = 20/91 (21%), Positives = 35/91 (38%), Gaps = 6/91 (6%) Query: 94 LDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGV 153 ++ + + +L HGL+L ++L D QQ+I R Sbjct: 2588 RNRVDALKSFQQDTETMVLLLSTQLGAHGLDLSCASHVL-LPDPPTDPNVEQQVISR--- 2643 Query: 154 TRQRQAGFKRAVFVYYLIAQNTIDELVLQRL 184 + G R V V I ++T++E +LQ Sbjct: 2644 --AHRMGALRDVHVEIFILKDTVEETILQLR 2672 >gi|321465194|gb|EFX76197.1| hypothetical protein DAPPUDRAFT_249322 [Daphnia pulex] Length = 292 Score = 54.6 bits (130), Expect = 8e-06, Method: Composition-based stats. Identities = 19/73 (26%), Positives = 30/73 (41%), Gaps = 7/73 (9%) Query: 105 NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA 164 + ++ +L + G GLNL N L W+ + Q +RI + G K+ Sbjct: 130 QKKEVHVLLVSLLAGGTGLNLIGPANHLFLSDQNWNPQVEAQAGDRI-----YRVGQKKE 184 Query: 165 VFVY--YLIAQNT 175 V V L+A T Sbjct: 185 VHVLLVSLLAGGT 197 Score = 54.2 bits (129), Expect = 1e-05, Method: Composition-based stats. Identities = 16/63 (25%), Positives = 26/63 (41%), Gaps = 5/63 (7%) Query: 105 NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA 164 + ++ +L + G GLNL N L W+ + Q +RI + G K+ Sbjct: 181 QKKEVHVLLVSLLAGGTGLNLIGPANHLFLSDQNWNPQVEAQAGDRI-----YRVGQKKE 235 Query: 165 VFV 167 V V Sbjct: 236 VHV 238 Score = 53.4 bits (127), Expect = 2e-05, Method: Composition-based stats. Identities = 26/106 (24%), Positives = 37/106 (34%), Gaps = 11/106 (10%) Query: 76 HFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKI----PLLFAHPASCGHGLNLQYGGNI 131 + D L+ L IQ+ N I +L + G GLNL N Sbjct: 46 WIDDDGECLKLLVETVVLLRMKDDKIQDTNLPLITMPKKVLLVSLLAGGTGLNLIGPANH 105 Query: 132 LVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVY--YLIAQNT 175 L W+ + Q +RI + G K+ V V L+A T Sbjct: 106 LFLSDQNWNPQVEAQAGDRI-----YRVGQKKEVHVLLVSLLAGGT 146 >gi|76153117|gb|AAX24778.2| SJCHGC03308 protein [Schistosoma japonicum] Length = 213 Score = 54.6 bits (130), Expect = 8e-06, Method: Composition-based stats. Identities = 12/43 (27%), Positives = 25/43 (58%) Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKK 200 + G + V VY LI +NT++ +L+R K +Q +++ + + Sbjct: 1 RLGQTKPVTVYRLICKNTVEGRMLRRAEEKRAMQQMVIQSGQA 43 >gi|330947467|gb|EGH48088.1| SNF2-related:helicase [Pseudomonas syringae pv. pisi str. 1704B] Length = 133 Score = 54.6 bits (130), Expect = 8e-06, Method: Composition-based stats. Identities = 23/133 (17%), Positives = 46/133 (34%), Gaps = 18/133 (13%) Query: 55 KIKALEVIIEKAN-AAPIIVAYHFNSDLARLQKAFPQGRT----------LDKDPCTIQE 103 K++ L ++ + + +I+ + +A L++ + K I Sbjct: 7 KVRILADLMAELDVDDKVILFCEYQESVATLREHCLKIGIGCVTLVGSDSPKKRQKAIDA 66 Query: 104 WNEG-KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFK 162 + + + ++ G G NL N + F L W Q +R + G Sbjct: 67 FQQDQDCRIFIGTRSAAGTGYNLT-AANYVFFLGLPWTPGLQDQAEDR-----AYRNGQL 120 Query: 163 RAVFVYYLIAQNT 175 R V V +A +T Sbjct: 121 RMVVVKIPLADDT 133 >gi|311899146|dbj|BAJ31554.1| hypothetical protein KSE_57820 [Kitasatospora setae KM-6054] Length = 613 Score = 54.6 bits (130), Expect = 8e-06, Method: Composition-based stats. Identities = 34/148 (22%), Positives = 59/148 (39%), Gaps = 11/148 (7%) Query: 57 KALEVII-EKANAAPIIVAYHFNSDLARLQKAFP-------QGRTLDKDPCTIQEWNEGK 108 + LE++ A +V F L LQ+ G T D+ + + Sbjct: 430 ETLEIVAANAALGRKTLVWTTFVRSLTTLQEMLAPYRPAVVHGGTADRAEELRRFREDPD 489 Query: 109 IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVY 168 +L ++PA+ G G++L + V+ + Q ++RI G + V + Sbjct: 490 CLVLLSNPATLGEGISLHQVCHDAVYVDRDFMAGRFLQSLDRIHRLGL-APGTETRVTI- 547 Query: 169 YLIAQNTIDELVLQRLRTKSTIQDLLLN 196 L A TIDE+V RL+ K +L+ Sbjct: 548 -LAATGTIDEVVALRLQQKLDFMGRILD 574 >gi|146281859|ref|YP_001172012.1| helicase, putative [Pseudomonas stutzeri A1501] gi|145570064|gb|ABP79170.1| helicase, putative [Pseudomonas stutzeri A1501] gi|327480090|gb|AEA83400.1| helicase, putative [Pseudomonas stutzeri DSM 4166] Length = 1012 Score = 54.6 bits (130), Expect = 8e-06, Method: Composition-based stats. Identities = 33/197 (16%), Positives = 75/197 (38%), Gaps = 40/197 (20%) Query: 40 VYYDEEKHWKEVHDE--KIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFP------ 89 +Y + H +++ E K+ + ++++ +I+ L R+ K + Sbjct: 820 LYSRDGHHARQLMSESGKLAVMLKLLDEIRDKGEKVILFMMTKR-LQRVLKLWLDQIYGL 878 Query: 90 --------------QGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFF 135 + + + + +L P + G GL + G N +V Sbjct: 879 DIAVINGDTKAVATKAEEMTRKKLISAFEAKSGFNVLVMSPVAAGVGLTV-VGANHVVHL 937 Query: 136 SLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQ-----NTIDELVLQRLRTKSTI 190 W+ + Q +R+ + G ++ VF+ +L A ++ D + + LR K + Sbjct: 938 ERHWNPAKEAQASDRV-----YRIGQQKEVFI-HLPAVTHPQFDSFDVHLDRLLRGKLML 991 Query: 191 QDLLL--NAL-KKETIH 204 +D ++ A+ + E IH Sbjct: 992 KDAVVTPEAVSESEMIH 1008 >gi|325982151|ref|YP_004294553.1| SNF2-like protein [Nitrosomonas sp. AL212] gi|325531670|gb|ADZ26391.1| SNF2-related protein [Nitrosomonas sp. AL212] Length = 951 Score = 54.6 bits (130), Expect = 8e-06, Method: Composition-based stats. Identities = 28/127 (22%), Positives = 53/127 (41%), Gaps = 11/127 (8%) Query: 73 VAYHFNSDLARLQKAFPQGRTLDKDPCTIQEW-NEGKIPLLFAHPASCGHGLNLQYGGNI 131 V Y+ + + RT D + + EG+I + + G+NLQ+ ++ Sbjct: 463 VIYNQWLERHQGTDRLSGSRTADMRSALVDYFREEGRIMIA---TEAGAEGINLQF-CSL 518 Query: 132 LVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIA-QNTIDELVLQRLRTKSTI 190 +V + L W+ + +Q I R + G K V V + +N D+ V + L K + Sbjct: 519 VVNYDLPWNPQRIEQRIGRC-----HRYGQKHDVVVVNFLNRKNAADKRVFELLAEKFKL 573 Query: 191 QDLLLNA 197 + + A Sbjct: 574 FEGVFGA 580 >gi|76157733|gb|AAX28568.2| SJCHGC04949 protein [Schistosoma japonicum] Length = 193 Score = 54.6 bits (130), Expect = 8e-06, Method: Composition-based stats. Identities = 13/81 (16%), Positives = 29/81 (35%), Gaps = 6/81 (7%) Query: 111 LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYL 170 +L +GLNL N ++F Q + RI + G R ++ Sbjct: 52 ILLMPVQLGANGLNLT-SANHVLFIDPVLSHAREAQAVARI-----HRIGQTRPGIIHRF 105 Query: 171 IAQNTIDELVLQRLRTKSTIQ 191 + +++I+ + + + Sbjct: 106 LVKDSIEAALHASQSRNTDLS 126 >gi|134299055|ref|YP_001112551.1| helicase domain-containing protein [Desulfotomaculum reducens MI-1] gi|134051755|gb|ABO49726.1| helicase domain protein [Desulfotomaculum reducens MI-1] Length = 456 Score = 54.6 bits (130), Expect = 8e-06, Method: Composition-based stats. Identities = 30/153 (19%), Positives = 58/153 (37%), Gaps = 15/153 (9%) Query: 59 LEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD------PCTIQEWNEGKIPLL 112 +I + + ++ N + L KA + + ++ G I L Sbjct: 279 CAELINQTDDT-WLIWCDLNDESDALTKAIEGAVEVRGSHKPAYKEKAMLDFAAGDIKRL 337 Query: 113 FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIA 172 + + CG G+N Q N + F L E+ Q I R + G + V VY +I Sbjct: 338 VSKSSICGFGMNFQV-CNRMAFVGLSDSFEQIFQAIRRCW-----RFGQTKPVDVY-IIT 390 Query: 173 QNTIDELVLQRLRTKSTIQDLLLNALKKETIHV 205 T + VL+ ++ K +++ + + T + Sbjct: 391 AET-EGAVLENIKRKEQDFKNMVDEMVRYTQGI 422 >gi|307256725|ref|ZP_07538504.1| hypothetical protein appser10_7280 [Actinobacillus pleuropneumoniae serovar 10 str. D13039] gi|306864773|gb|EFM96677.1| hypothetical protein appser10_7280 [Actinobacillus pleuropneumoniae serovar 10 str. D13039] Length = 957 Score = 54.6 bits (130), Expect = 8e-06, Method: Composition-based stats. Identities = 36/139 (25%), Positives = 61/139 (43%), Gaps = 12/139 (8%) Query: 62 IIEKANAAPIIVAYHFNSDLARLQ--KAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASC 119 + N P VA + LAR Q + +DK I+ + E K ++ A + Sbjct: 461 LFSGTNNDPNSVAI-YQDWLARYQGTEKITGSAEVDKRSALIEHFKE-KAQIMIA-TEAA 517 Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQ-NTIDE 178 G+NLQ+ ++L+ + L W+ + +Q I R + G K V V + + N D+ Sbjct: 518 SEGVNLQF-CSLLINYDLPWNPQRVEQRIGRC-----HRYGQKFDVVVINFLNKRNLADQ 571 Query: 179 LVLQRLRTKSTIQDLLLNA 197 VL+ L K + +L A Sbjct: 572 RVLELLTEKFKLFQGVLGA 590 >gi|295835438|ref|ZP_06822371.1| helicase [Streptomyces sp. SPB74] gi|295825492|gb|EDY43404.2| helicase [Streptomyces sp. SPB74] Length = 1741 Score = 54.6 bits (130), Expect = 8e-06, Method: Composition-based stats. Identities = 24/97 (24%), Positives = 34/97 (35%), Gaps = 4/97 (4%) Query: 93 TLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIG 152 T +K Q N G I +L G G N Q L+ W Q RI Sbjct: 222 TPEKKAAMSQAANHGGIAVLMGSTEVLGTGFNGQNRAYALMHLDQDWTPASMIQRNGRIV 281 Query: 153 VTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKST 189 R V VY+L + ++D + L +K+ Sbjct: 282 ----RPGNQHEEVNVYFLATKGSMDAWQVGLLTSKAE 314 >gi|323448154|gb|EGB04056.1| hypothetical protein AURANDRAFT_33115 [Aureococcus anophagefferens] Length = 114 Score = 54.6 bits (130), Expect = 8e-06, Method: Composition-based stats. Identities = 20/72 (27%), Positives = 32/72 (44%), Gaps = 6/72 (8%) Query: 128 GGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTK 187 G N L+ W+ Q + RI + G R V ++ +I+EL+L R K Sbjct: 42 GANHLIELGPSWNPVTDVQALGRIQ-----RFGQTRPCHVVRVVICGSIEELILLRQADK 96 Query: 188 STIQDLLLNALK 199 S + + L+N K Sbjct: 97 SGLVE-LVNGGK 107 >gi|319744479|gb|EFV96836.1| SNF2 family protein [Streptococcus agalactiae ATCC 13813] Length = 1998 Score = 54.6 bits (130), Expect = 8e-06, Method: Composition-based stats. Identities = 20/88 (22%), Positives = 36/88 (40%), Gaps = 4/88 (4%) Query: 90 QGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIE 149 T +K ++ N G++ +L A G GLN+Q + + W + Q Sbjct: 1905 DANTDEKKNSLSRKVNSGEVRILMASTEKGGTGLNVQSRMKAVHHLDVPWRPSDIVQRNG 1964 Query: 150 RIGVTRQRQAGFKRAVFVYYLIAQNTID 177 R+ RQ + V +Y+ I + + D Sbjct: 1965 RLI----RQGNMHQEVDIYHYITKGSFD 1988 >gi|254422766|ref|ZP_05036484.1| Helicase conserved C-terminal domain protein [Synechococcus sp. PCC 7335] gi|196190255|gb|EDX85219.1| Helicase conserved C-terminal domain protein [Synechococcus sp. PCC 7335] Length = 1051 Score = 54.6 bits (130), Expect = 8e-06, Method: Composition-based stats. Identities = 26/148 (17%), Positives = 57/148 (38%), Gaps = 18/148 (12%) Query: 50 EVHDEKIKALEVIIEK----ANAAPIIVAYHFNSDLARLQKAFPQGRTL---------DK 96 E D K L+ ++ +A ++ +F L L + D+ Sbjct: 524 EAQDSKYNKLKDFLDSELAKDSAQKFVIFAYFRGTLKYLARRLNAAGISTGLIMGDMGDR 583 Query: 97 DPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 +Q++ + + P + G++LQ+ LV + L W+ +Q I R+ Q Sbjct: 584 KWEVVQQFRQPEGPSVLLSSEVGSEGIDLQH-CRFLVNYDLPWNPMRVEQRIGRLDRLNQ 642 Query: 157 RQAGFKRAVFVYYLIAQNTIDELVLQRL 184 + + + ++T++ +L+RL Sbjct: 643 KA----ERISIVNFSLKDTVEAEILERL 666 >gi|160932541|ref|ZP_02079931.1| hypothetical protein CLOLEP_01379 [Clostridium leptum DSM 753] gi|156868500|gb|EDO61872.1| hypothetical protein CLOLEP_01379 [Clostridium leptum DSM 753] Length = 412 Score = 54.6 bits (130), Expect = 8e-06, Method: Composition-based stats. Identities = 30/140 (21%), Positives = 55/140 (39%), Gaps = 21/140 (15%) Query: 58 ALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGK---IP---- 110 AL + EK +IV Y+F+ +L L+ + + I EWN K IP Sbjct: 271 ALMELFEKH--PKMIVFYNFDYELDILKNLY------YGENVEIAEWNGHKHQPIPTCDS 322 Query: 111 -LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYY 169 + + G N + +VF+S + + +Q R + ++ Y+ Sbjct: 323 WVYLVQYTAGAEGWNC-ISTDTIVFYSQNYSYKIMKQSAGRTDRLNT----PFKDLYYYH 377 Query: 170 LIAQNTIDELVLQRLRTKST 189 L +++ ID + + L K Sbjct: 378 LKSRSGIDLAISRALSEKRN 397 >gi|148238375|ref|YP_001223762.1| SNF2 family DNA/RNA helicase [Synechococcus sp. WH 7803] gi|147846914|emb|CAK22465.1| Superfamily II DNA/RNA helicases, SNF2 family [Synechococcus sp. WH 7803] Length = 502 Score = 54.6 bits (130), Expect = 9e-06, Method: Composition-based stats. Identities = 31/148 (20%), Positives = 61/148 (41%), Gaps = 14/148 (9%) Query: 55 KIKALEVIIEK--ANAAPIIVAYHFNSDL----ARLQKAFPQGRTLDKDPCT-IQEWNEG 107 K+ A E ++++ A +++ F + L RL A GR ++ T + ++ G Sbjct: 339 KLPAAERLVQQLRAQGESVVLFSSFVAPLVLLQQRLGGALLTGRQKPEERQTAVDQFQAG 398 Query: 108 KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFV 167 LL A + G G L + +V W + Q +R + G + Sbjct: 399 STDLLLATYGAGGLGFTL-HRARQVVLLERPWTPGDVDQAEDRC-----HRLGMDGELVS 452 Query: 168 YYLIAQNTIDELVLQRLRTKSTIQDLLL 195 ++L D+LV + +K++ +LL+ Sbjct: 453 HWLQL-GPADQLVDGLVASKASRIELLM 479 >gi|293392002|ref|ZP_06636336.1| putative DEAD/DEAH box helicase [Aggregatibacter actinomycetemcomitans D7S-1] gi|290952536|gb|EFE02655.1| putative DEAD/DEAH box helicase [Aggregatibacter actinomycetemcomitans D7S-1] Length = 958 Score = 54.6 bits (130), Expect = 9e-06, Method: Composition-based stats. Identities = 22/107 (20%), Positives = 46/107 (42%), Gaps = 9/107 (8%) Query: 92 RTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERI 151 +T D ++ + E + + G+NLQ+ ++++ + L W+ + +Q I R Sbjct: 489 KTADTRAALVEHFKERGT--IMIATEAGAEGINLQF-CSLIINYDLPWNPQRVEQRIGRC 545 Query: 152 GVTRQRQAGFKRAVFVYYLIAQ-NTIDELVLQRLRTKSTIQDLLLNA 197 + G K V V + + N D+ V + L K + + + A Sbjct: 546 -----HRYGQKHDVVVVNFVDETNEADQRVYELLEQKFQLFNGVFGA 587 >gi|171060838|ref|YP_001793187.1| helicase domain-containing protein [Leptothrix cholodnii SP-6] gi|170778283|gb|ACB36422.1| helicase domain protein [Leptothrix cholodnii SP-6] Length = 947 Score = 54.6 bits (130), Expect = 9e-06, Method: Composition-based stats. Identities = 22/112 (19%), Positives = 45/112 (40%), Gaps = 9/112 (8%) Query: 87 AFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 RT D ++ + + + + G+NLQ+ ++++ + L W+ + +Q Sbjct: 474 RITGSRTADTRAALVEHFRDSAQ--IMIATEAGAEGINLQF-CSLVINYDLPWNPQRIEQ 530 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLI-AQNTIDELVLQRLRTKSTIQDLLLNA 197 I R + G + V V I N D+ V + L K + + + A Sbjct: 531 RIGRC-----HRYGQQHDVVVVNFIDLSNPADQRVYELLAQKFQLFEGVFGA 577 >gi|300114480|ref|YP_003761055.1| SNF2-like protein [Nitrosococcus watsonii C-113] gi|299540417|gb|ADJ28734.1| SNF2-related protein [Nitrosococcus watsonii C-113] Length = 1145 Score = 54.6 bits (130), Expect = 9e-06, Method: Composition-based stats. Identities = 23/120 (19%), Positives = 48/120 (40%), Gaps = 13/120 (10%) Query: 86 KAFPQGRTLDKDPCTIQEWNEGK-IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEH 144 KA + I+ + E ++ P + G GL + G N ++ W+ + Sbjct: 868 KAVAKRAASPTRQSMIRAFEERDGFNVIIMSPIAAGVGLTV-VGANNVIHLERHWNPAKE 926 Query: 145 QQMIERIGVTRQRQAGFKRAV-----FVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 Q +R+ + G KR V +++ Q + D + Q L K ++D ++ ++ Sbjct: 927 AQATDRV-----YRIGQKRKVNVFIPLIHHPEYQ-SFDVNLHQLLSRKGQLKDAVVTPVQ 980 >gi|330948217|gb|EGH48477.1| SNF2-related:helicase [Pseudomonas syringae pv. pisi str. 1704B] Length = 98 Score = 54.6 bits (130), Expect = 9e-06, Method: Composition-based stats. Identities = 18/82 (21%), Positives = 29/82 (35%), Gaps = 7/82 (8%) Query: 95 DKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGV 153 K I + + + ++ G G NL N + F L W Q +R Sbjct: 23 KKRQKAIDAFQQDPDCRVFIGTRSAAGTGYNLT-AANYVFFLGLPWTPGLQDQAEDR--- 78 Query: 154 TRQRQAGFKRAVFVYYLIAQNT 175 + G R V V +A++T Sbjct: 79 --AYRNGQLRMVVVKIPLAEDT 98 >gi|304311832|ref|YP_003811430.1| hypothetical protein HDN1F_22020 [gamma proteobacterium HdN1] gi|301797565|emb|CBL45785.1| Hypothetical protein HDN1F_22020 [gamma proteobacterium HdN1] Length = 912 Score = 54.6 bits (130), Expect = 9e-06, Method: Composition-based stats. Identities = 19/105 (18%), Positives = 38/105 (36%) Query: 91 GRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 G I +N P L + G G++L ++ L W+ +Q R Sbjct: 761 GTERHVRERLIALFNTPFAPELLVASSVMGEGIDLHQECRFVIHHDLDWNPSVLEQRTGR 820 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 + R + VY T DE + + ++ ++ D+++ Sbjct: 821 LDRIGALADRLGRNIEVYEPYLAGTHDEKMYKVVKDRAQWFDIVM 865 >gi|85119219|ref|XP_965595.1| hypothetical protein NCU02913 [Neurospora crassa OR74A] gi|28927406|gb|EAA36359.1| predicted protein [Neurospora crassa OR74A] Length = 846 Score = 54.6 bits (130), Expect = 9e-06, Method: Composition-based stats. Identities = 14/73 (19%), Positives = 26/73 (35%), Gaps = 6/73 (8%) Query: 123 LNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQ 182 L L + W+ Q + RI + G R V +++ +E V++ Sbjct: 747 LTLTV-ASYAFLMEPHWNPTLEDQALARI-----HRMGQTREVTTARFFIRDSFEERVME 800 Query: 183 RLRTKSTIQDLLL 195 K + +LL Sbjct: 801 VQEKKRKLVTVLL 813 >gi|254516162|ref|ZP_05128222.1| Type III restriction enzyme, res subunit family [gamma proteobacterium NOR5-3] gi|219675884|gb|EED32250.1| Type III restriction enzyme, res subunit family [gamma proteobacterium NOR5-3] Length = 961 Score = 54.6 bits (130), Expect = 9e-06, Method: Composition-based stats. Identities = 24/105 (22%), Positives = 45/105 (42%), Gaps = 9/105 (8%) Query: 94 LDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGV 153 +DK I + + + + G+NLQ+ ++++ + L W+ + +Q I R Sbjct: 492 VDKRTALIDRFRDDAE--VLIATEAAAEGVNLQF-CSLVINYDLPWNPQRVEQRIGRC-- 546 Query: 154 TRQRQAGFKRAVFVYYLIAQ-NTIDELVLQRLRTKSTIQDLLLNA 197 + G + V V + + N D VL+ L K + D L A Sbjct: 547 ---HRYGQRFDVVVINFLNKRNDADRRVLELLSEKFHLFDGLFGA 588 >gi|308271075|emb|CBX27685.1| hypothetical protein N47_H25070 [uncultured Desulfobacterium sp.] Length = 980 Score = 54.6 bits (130), Expect = 9e-06, Method: Composition-based stats. Identities = 24/107 (22%), Positives = 49/107 (45%), Gaps = 9/107 (8%) Query: 92 RTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERI 151 R +D I+ + + +L A + G+NLQ+ ++++ + L W+ + +Q I R Sbjct: 503 RAVDVRTSLIEHF-RDEGSILLA-TEAAAEGINLQF-CSLVINYDLPWNPQRIEQRIGRC 559 Query: 152 GVTRQRQAGFKRAVFVYYLIA-QNTIDELVLQRLRTKSTIQDLLLNA 197 + G + V V + +N +D VL+ L K ++ + A Sbjct: 560 -----HRYGQRHDVVVINFLNERNEVDRRVLELLGEKFSLFSGVFGA 601 >gi|115442277|ref|NP_001045418.1| Os01g0952200 [Oryza sativa Japonica Group] gi|57899941|dbj|BAD87853.1| putative rad8 [Oryza sativa Japonica Group] gi|113534949|dbj|BAF07332.1| Os01g0952200 [Oryza sativa Japonica Group] gi|218189747|gb|EEC72174.1| hypothetical protein OsI_05224 [Oryza sativa Indica Group] gi|222619881|gb|EEE56013.1| hypothetical protein OsJ_04781 [Oryza sativa Japonica Group] Length = 1298 Score = 54.6 bits (130), Expect = 9e-06, Method: Composition-based stats. Identities = 22/127 (17%), Positives = 48/127 (37%), Gaps = 16/127 (12%) Query: 70 PIIVAYHFNSDLARLQKAFPQGRT----------LDKDPCTIQEWNEGKIPLLFAHPASC 119 +I+ F + +++ G L ++ ++ + + + Sbjct: 1128 KVIIFSQFLEHIHVIEQQLTIGGITYAGMYSPMPLGSKRSSLTKFKDDPACMALVMDGTA 1187 Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 GL+L + + + WD +Q+I R + G R +FV L + TI+E Sbjct: 1188 ALGLDLSF-VSYVFLMEPIWDRSMEEQVISR-----AHRMGATRPIFVETLAMRGTIEEQ 1241 Query: 180 VLQRLRT 186 +L+ L+ Sbjct: 1242 MLKLLQD 1248 >gi|307261168|ref|ZP_07542844.1| hypothetical protein appser12_7310 [Actinobacillus pleuropneumoniae serovar 12 str. 1096] gi|306869150|gb|EFN00951.1| hypothetical protein appser12_7310 [Actinobacillus pleuropneumoniae serovar 12 str. 1096] Length = 957 Score = 54.2 bits (129), Expect = 9e-06, Method: Composition-based stats. Identities = 28/106 (26%), Positives = 50/106 (47%), Gaps = 9/106 (8%) Query: 93 TLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIG 152 +DK I+ + E K ++ A + G+NLQ+ ++L+ + L W+ + +Q I R Sbjct: 493 EVDKRSALIEHFKE-KAQIMIA-TEAASEGVNLQF-CSLLINYDLPWNPQRVEQRIGRC- 548 Query: 153 VTRQRQAGFKRAVFVYYLIAQ-NTIDELVLQRLRTKSTIQDLLLNA 197 + G K V V + + N D+ VL+ L K + +L A Sbjct: 549 ----HRYGQKFDVVVINFLNKRNLADQRVLELLTEKFKLFQGVLGA 590 >gi|255604124|ref|XP_002538172.1| ATP-dependent helicase, putative [Ricinus communis] gi|223513471|gb|EEF24211.1| ATP-dependent helicase, putative [Ricinus communis] Length = 319 Score = 54.2 bits (129), Expect = 9e-06, Method: Composition-based stats. Identities = 22/94 (23%), Positives = 39/94 (41%), Gaps = 6/94 (6%) Query: 104 WNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKR 163 + L+ + G G+NLQ N++V + L W+ +Q RI + G Sbjct: 57 FRNDANTLVLLATDAAGEGVNLQN-ANLMVNYDLPWNPNRLEQRFGRI-----HRIGQTE 110 Query: 164 AVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 ++ ++A T + V QRL K ++ L Sbjct: 111 VCHLWNMVAAETREGDVFQRLFAKLEVERDALGG 144 >gi|326522272|dbj|BAK07598.1| predicted protein [Hordeum vulgare subsp. vulgare] Length = 178 Score = 54.2 bits (129), Expect = 1e-05, Method: Composition-based stats. Identities = 15/80 (18%), Positives = 34/80 (42%), Gaps = 6/80 (7%) Query: 109 IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVY 168 + +L +GLNL + ++ + Q I RI + G ++ F++ Sbjct: 36 VQVLLMLIQHGANGLNLLEAQH-VILLEPLLNPSAEAQAISRI-----HRVGQDKSTFIH 89 Query: 169 YLIAQNTIDELVLQRLRTKS 188 I + TI++ + + R ++ Sbjct: 90 RFIVKKTIEDSIYKMNRGRA 109 >gi|119508908|ref|ZP_01628060.1| putative ATP-dependent helicase [Nodularia spumigena CCY9414] gi|119466437|gb|EAW47322.1| putative ATP-dependent helicase [Nodularia spumigena CCY9414] Length = 958 Score = 54.2 bits (129), Expect = 1e-05, Method: Composition-based stats. Identities = 23/97 (23%), Positives = 42/97 (43%), Gaps = 11/97 (11%) Query: 99 CTIQEWNEGKIPL-LFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 ++++ + K P+ + GLNL Y + L+ F + W L QQ RI Sbjct: 494 KIVEQFGQEKSPVRILIATEVASEGLNLHYLSHKLIHFDIPWSLMTLQQRNGRID----- 548 Query: 158 QAGFKRAVFVYYLIAQNTIDE-----LVLQRLRTKST 189 + G R + YL+ ++T++ ++Q L K Sbjct: 549 RYGQTRQPEIRYLLTRSTLERMDEVKRIIQVLLVKDE 585 >gi|328953052|ref|YP_004370386.1| helicase domain protein [Desulfobacca acetoxidans DSM 11109] gi|328453376|gb|AEB09205.1| helicase domain protein [Desulfobacca acetoxidans DSM 11109] Length = 1309 Score = 54.2 bits (129), Expect = 1e-05, Method: Composition-based stats. Identities = 33/143 (23%), Positives = 55/143 (38%), Gaps = 37/143 (25%) Query: 69 APIIVAYHFNSDLARLQKAFPQGRTLD--------------------------KDPCTIQ 102 P+++ F L + K RT+D + + Sbjct: 799 QPVVIFTRFFDTLTDIVKRL---RTIDIRLLIGAYSGQGGQYIDPKTFTLVGVEREEIKR 855 Query: 103 EWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFK 162 + +I +L A+ GLNLQ G ++L+ F L W+ + +Q I RI + G K Sbjct: 856 RFLRSEIDILVCTDAAA-EGLNLQ-GADLLINFDLPWNPMKVEQRIGRID-----RIGQK 908 Query: 163 -RAVFVYYLIAQNTIDELVLQRL 184 V+V L + +E+V RL Sbjct: 909 YETVYVLNLCYAGSAEEIVYGRL 931 >gi|192292173|ref|YP_001992778.1| SNF2-related protein [Rhodopseudomonas palustris TIE-1] gi|192285922|gb|ACF02303.1| SNF2-related protein [Rhodopseudomonas palustris TIE-1] Length = 961 Score = 54.2 bits (129), Expect = 1e-05, Method: Composition-based stats. Identities = 21/93 (22%), Positives = 42/93 (45%), Gaps = 7/93 (7%) Query: 106 EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 + + S G+NLQ+ ++L+ F L W+ + +Q I R + G K V Sbjct: 505 KSDQKTILIATESGAEGINLQF-CSLLINFDLPWNPQRVEQRIGRC-----HRYGQKIDV 558 Query: 166 FVYYLIA-QNTIDELVLQRLRTKSTIQDLLLNA 197 V ++ +N ++ + + L+ K + + L A Sbjct: 559 TVVNMLNRKNQAEKRIYELLKNKFNLFEGLFGA 591 >gi|145608510|ref|XP_370061.2| hypothetical protein MGG_12793 [Magnaporthe oryzae 70-15] gi|145015982|gb|EDK00472.1| hypothetical protein MGG_12793 [Magnaporthe oryzae 70-15] Length = 550 Score = 54.2 bits (129), Expect = 1e-05, Method: Composition-based stats. Identities = 17/77 (22%), Positives = 30/77 (38%), Gaps = 9/77 (11%) Query: 119 CGHGL---NLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNT 175 G GL NL +I + F W+ Q I R ++ G + VFV + T Sbjct: 466 AGMGLPLLNLTVASHIFI-FEPQWNPSVESQAIGR-----AQRLGQDQQVFVTRYLVAGT 519 Query: 176 IDELVLQRLRTKSTIQD 192 ++ + + + K + Sbjct: 520 VENRMHSQQKRKVELAK 536 >gi|240276209|gb|EER39721.1| SNF2 family helicase [Ajellomyces capsulatus H143] Length = 1198 Score = 54.2 bits (129), Expect = 1e-05, Method: Composition-based stats. Identities = 27/162 (16%), Positives = 57/162 (35%), Gaps = 21/162 (12%) Query: 49 KEVHDEKIKALEV-IIEKANAAPIIVAYHFNSDLARLQKAFP--------QGRTLDK--D 97 K+ L +IE II+ Y N+ + + TL Sbjct: 911 VATASAKLTYLLDKVIEFQEKEKIIIFYEGNNTGFYIAEGLELLGVEFRIYANTLKTKTR 970 Query: 98 PCTIQEWNEGK-IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 + +NE + + +L HGL++ + + + WD Q I+R Sbjct: 971 SEYLSLFNETETVRVLLMDLRQAAHGLHI-ACASRVFIVNPIWDPNFESQAIKR-----A 1024 Query: 157 RQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNAL 198 + + V+V L+ ++ ++ + R K + D ++ + Sbjct: 1025 HRISQNKPVYVETLVLKD-VECRI--ATREKDPLDDRTMSDI 1063 >gi|85859510|ref|YP_461712.1| snf2-related protein with C-terminal helicase [Syntrophus aciditrophicus SB] gi|85722601|gb|ABC77544.1| snf2-related protein with C-terminal Helicase [Syntrophus aciditrophicus SB] Length = 1178 Score = 54.2 bits (129), Expect = 1e-05, Method: Composition-based stats. Identities = 32/216 (14%), Positives = 77/216 (35%), Gaps = 41/216 (18%) Query: 5 HKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIE 64 + E L+ E + A + +L A + ++ +D K+ AL+ + Sbjct: 457 DQLADEYTAALELEQLRA-----EISALRELVEQA-----RRVREDANDSKLAALKKCLG 506 Query: 65 KAN-------AAPIIVAYHFNSDLARLQKAFPQ----------GRTLDKDPCTIQEWNEG 107 +A +++ L ++ + G + + + G Sbjct: 507 EAQFLELKDGRGKLLIFTEHRDTLGYVRDHLERWGFSTCEIHGGMNPHERKRAQEVFRTG 566 Query: 108 KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFV 167 + + G G+NLQ+ ++++ + + W+ +Q + RI + G R V+ Sbjct: 567 AQ--VCIATEAAGEGINLQF-CHLMINYDMPWNPTRLEQRLGRI-----HRIGQDRDVYA 618 Query: 168 YYLIAQNT------IDELVLQRLRTKSTIQDLLLNA 197 + +A ++ ++ +L RL K + L Sbjct: 619 FNFVATDSEDGQPIVEGRILHRLLEKLDQMNEALEG 654 >gi|219883267|ref|YP_002478428.1| helicase domain protein [Arthrobacter chlorophenolicus A6] gi|219862112|gb|ACL42452.1| helicase domain protein [Arthrobacter chlorophenolicus A6] Length = 1086 Score = 54.2 bits (129), Expect = 1e-05, Method: Composition-based stats. Identities = 31/170 (18%), Positives = 55/170 (32%), Gaps = 32/170 (18%) Query: 46 KHWKEVHDEKIKALEVIIEKAN-AAPIIVAYHFNSDLARLQKAFPQGRTL---------D 95 W D KI AL ++ + ++V + + + D Sbjct: 676 GDWDASKDSKINALVDLLRNEHPGEKVLVFTEYKDTADYIAATLREAGIRNVGLATGDTD 735 Query: 96 KDPCTIQEWNEGKIPL--------------LFAHPASCGHGLNLQYGGNILVFFSLWWDL 141 + ++ G L + G NLQ +I+V + L W + Sbjct: 736 NPGAVARRFSPGSNKLPGQQDDASSSDPIDVLIATDVLSEGQNLQDS-HIVVNYDLPWAI 794 Query: 142 EEHQQMIERIGVTRQRQAGFK-RAVFVYYLIAQNTIDELVLQRLRTKSTI 190 Q R+ + G K V+VY LI+ ++E + R R K + Sbjct: 795 IRLIQRAGRVD-----RIGQKSETVYVY-LISHEKVEEQISLRQRIKMRL 838 >gi|170578325|ref|XP_001894363.1| Helicase conserved C-terminal domain containing protein [Brugia malayi] gi|158599086|gb|EDP36796.1| Helicase conserved C-terminal domain containing protein [Brugia malayi] Length = 800 Score = 54.2 bits (129), Expect = 1e-05, Method: Composition-based stats. Identities = 19/142 (13%), Positives = 43/142 (30%), Gaps = 17/142 (11%) Query: 66 ANAAPIIVAYHFNSDLARLQKAFPQ-----------GRTLDKDPCTIQEWNEGKIPLLFA 114 A +++ L Q R ++ I Sbjct: 254 AKGHRVLIFSQMTRVLDITQDYLVYKGYNYQRLDGSVRAEERFAAVNHFQTNSDIFCFLL 313 Query: 115 HPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQN 174 + G GG+ ++F ++ + Q R + G + V + L+A+ Sbjct: 314 STRAGGL-GLNLTGGDTVIFLDSDFNPQNDIQAAARC-----HRIGQTKPVKIIRLVARY 367 Query: 175 TIDELVLQRLRTKSTIQDLLLN 196 T+++++ R K + +L Sbjct: 368 TVEDMIQCRAARKLKMTQEILE 389 >gi|295697398|ref|YP_003590636.1| helicase domain protein [Bacillus tusciae DSM 2912] gi|295413000|gb|ADG07492.1| helicase domain protein [Bacillus tusciae DSM 2912] Length = 1314 Score = 54.2 bits (129), Expect = 1e-05, Method: Composition-based stats. Identities = 28/106 (26%), Positives = 50/106 (47%), Gaps = 8/106 (7%) Query: 91 GRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 GR + + +G+I +L A+ GLNLQ ++L+ F L W+ + +Q I R Sbjct: 838 GRGEADREEIKERFLQGEIDILLCTDAAA-EGLNLQT-ADMLINFDLGWNPMKIEQRIGR 895 Query: 151 IGVTRQRQAGFKRA-VFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 I + G + +FV L + +E+V RL + +L++ Sbjct: 896 ID-----RIGQRHPEIFVVNLCYAGSEEEVVYGRLLQRLEQANLVV 936 >gi|168704008|ref|ZP_02736285.1| helicase domain protein [Gemmata obscuriglobus UQM 2246] Length = 752 Score = 54.2 bits (129), Expect = 1e-05, Method: Composition-based stats. Identities = 28/148 (18%), Positives = 49/148 (33%), Gaps = 16/148 (10%) Query: 65 KANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQE------WNEGKIPLLFAHPAS 118 P +V N++ +Q+ P + + + G +L Sbjct: 293 ANEPGPCVVWAELNAEADAVQELIPDAVQVAGADKDEDKLSRLKGFAAGTHRVLVTKTTV 352 Query: 119 CGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNT-ID 177 G GLN Q+ +VF L E+ Q + R + G V VY + T D Sbjct: 353 AGFGLNWQH-CRRMVFVGLSNSYEQFYQAVRRCW-----RFGQTGPVDVYLI---GTARD 403 Query: 178 ELVLQRLRTKSTIQDLLLNALKKETIHV 205 V + K + ++ + + T V Sbjct: 404 AGVWANIARKQRDHEAMVEGMLQHTRDV 431 >gi|301057976|ref|ZP_07199033.1| helicase C-terminal domain protein [delta proteobacterium NaphS2] gi|300447943|gb|EFK11651.1| helicase C-terminal domain protein [delta proteobacterium NaphS2] Length = 164 Score = 54.2 bits (129), Expect = 1e-05, Method: Composition-based stats. Identities = 21/102 (20%), Positives = 39/102 (38%), Gaps = 9/102 (8%) Query: 86 KAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQ 145 R +D I+ + + + G+NLQ+ ++++ F L W+ + + Sbjct: 70 GRVSGSRPIDVRTAIIEHF--RDNASILIATEAAAEGINLQF-CSLVINFDLPWNPQRIE 126 Query: 146 QMIERIGVTRQRQAGFKRAVFVYYLIA-QNTIDELVLQRLRT 186 Q I R + G K V V + +N D V + L Sbjct: 127 QRIGRC-----HRYGQKHDVVVINFLNERNAADRRVYELLNE 163 >gi|116194320|ref|XP_001222972.1| hypothetical protein CHGG_03758 [Chaetomium globosum CBS 148.51] gi|88179671|gb|EAQ87139.1| hypothetical protein CHGG_03758 [Chaetomium globosum CBS 148.51] Length = 910 Score = 54.2 bits (129), Expect = 1e-05, Method: Composition-based stats. Identities = 14/74 (18%), Positives = 28/74 (37%), Gaps = 6/74 (8%) Query: 123 LNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQ 182 L L + W+ +Q + RI + G R V +++ +E V++ Sbjct: 822 LTLTV-ASRAYLMEPHWNPTLEEQALARI-----HRIGQMREVTTVRFYIRDSFEERVIE 875 Query: 183 RLRTKSTIQDLLLN 196 K + +LL+ Sbjct: 876 LQNAKKDLARVLLS 889 >gi|255947902|ref|XP_002564718.1| Pc22g06920 [Penicillium chrysogenum Wisconsin 54-1255] gi|211591735|emb|CAP97980.1| Pc22g06920 [Penicillium chrysogenum Wisconsin 54-1255] Length = 1292 Score = 54.2 bits (129), Expect = 1e-05, Method: Composition-based stats. Identities = 30/165 (18%), Positives = 66/165 (40%), Gaps = 22/165 (13%) Query: 49 KEVHDEKI-KALEVIIEKANAAPIIVAYHFNSDLARLQKAFP----QGRTLDKDPCT--- 100 + V K+ LE +++ II+ Y ++ A +++ + RT Sbjct: 970 EGVASAKLRYLLEQVLKFEKTDKIIIFYEHDNVAAWVEQGLDLIAVKFRTYASTASMGSN 1029 Query: 101 -----IQEW-NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 + ++ ++ +L HGL++ + + + W+ Q I+R Sbjct: 1030 LKSENLSDFRQTHEVRVLLMSVKEASHGLHIPE-ASRMYIVNPIWERNVESQAIKR---- 1084 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 + G KR V+V L+ +T++ +L R +K+ + +A K Sbjct: 1085 -AHRIGQKRPVYVETLVLGDTLEHRMLNR--SKNMTDEETKHAGK 1126 >gi|118468269|ref|YP_885588.1| SNF2 domain-containing protein [Mycobacterium smegmatis str. MC2 155] gi|118169556|gb|ABK70452.1| SNF2 domain protein [Mycobacterium smegmatis str. MC2 155] Length = 663 Score = 54.2 bits (129), Expect = 1e-05, Method: Composition-based stats. Identities = 32/160 (20%), Positives = 58/160 (36%), Gaps = 17/160 (10%) Query: 54 EKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQKAFPQG------RTLDKDPCTIQEWN 105 K+ L +I +A N A ++V HF L ++KA P ++ + + Sbjct: 501 AKLDRLIELISEAHINGARVVVLSHFPGVLETIRKALPGTVFGPLDESVPDRQAMLDAFA 560 Query: 106 EGKIPL-LFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA 164 + P L A L + + W Q ER + R ++ Sbjct: 561 TARGPATLLAQLDVGPLDLRRLSMPLVAIVTEPQW-----QPRAERRMIGRTQRLSDLHT 615 Query: 165 VFVYYLIAQNTIDELVLQRLRTKSTI---QDLLLNALKKE 201 V V+ L+A+ +IDE + + QD ++ A + Sbjct: 616 VRVHRLLARGSIDEPIRRLAHHPDEPPPHQDEMVRAEQTR 655 >gi|115400926|ref|XP_001216051.1| conserved hypothetical protein [Aspergillus terreus NIH2624] gi|114189992|gb|EAU31692.1| conserved hypothetical protein [Aspergillus terreus NIH2624] Length = 1361 Score = 54.2 bits (129), Expect = 1e-05, Method: Composition-based stats. Identities = 24/122 (19%), Positives = 40/122 (32%), Gaps = 14/122 (11%) Query: 54 EKIKALEVII----EKANAAPIIVAYHFNSDLARLQKAFPQGRT----LDKDPCTIQEWN 105 KI L I E A +V + S L L+ AF + + +D + + Sbjct: 1231 TKIDMLARHILWLREHDPGAKSVVFSQYKSFLTYLRVAFSKFKIGFSSVDSNDGIHNFKS 1290 Query: 106 EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 + + H + GLNL + + + Q I R+ + G R Sbjct: 1291 DPSVECFLLHAKAQSSGLNLVNATH-VFLCEPLINTAIELQAIARV-----HRIGQHRPT 1344 Query: 166 FV 167 V Sbjct: 1345 TV 1346 >gi|14521088|ref|NP_126563.1| putative deah atp-dependent helicase [Pyrococcus abyssi GE5] gi|5458305|emb|CAB49794.1| Putative DEAH ATP-dependent helicase [Pyrococcus abyssi GE5] Length = 973 Score = 54.2 bits (129), Expect = 1e-05, Method: Composition-based stats. Identities = 33/152 (21%), Positives = 56/152 (36%), Gaps = 26/152 (17%) Query: 53 DEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFP--------------QGRTLDK 96 D K+ + ++++ +I+ F L L+K P G K Sbjct: 381 DTKLNIVANVVKQHVERGEKVIIFTEFKDTLEYLRKNLPSLAGLSDEDVSILHGGMPSGK 440 Query: 97 DPCTIQEWNE-GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTR 155 I+++ + GK L GLNLQ N+L+ + W + +Q + R+ Sbjct: 441 VEEEIRKFEKHGK---LLISTDVASEGLNLQV-ANVLINYEAPWTPIKLEQRVGRVW--- 493 Query: 156 QRQAGFKRAVFVYYLIAQNTIDELVLQRLRTK 187 + KR V Y + +D VL L K Sbjct: 494 --RINQKRDVKAYTIFLDTEVDMYVLNNLYRK 523 >gi|321264055|ref|XP_003196745.1| DNA repair protein rad8 [Cryptococcus gattii WM276] gi|317463222|gb|ADV24958.1| DNA repair protein rad8, putative [Cryptococcus gattii WM276] Length = 1919 Score = 54.2 bits (129), Expect = 1e-05, Method: Composition-based stats. Identities = 27/148 (18%), Positives = 53/148 (35%), Gaps = 17/148 (11%) Query: 54 EKIKALEVIIEKA-NAAPIIVAYHFNSDLARLQKAFPQGRT--------LDKDPCTIQEW 104 K++ L +I I+V + ++ +A G+ T+ + Sbjct: 1693 AKLEHLVNLIHSIPKDDRILVFLQWEDLAGKVSEALSAGKIPHVTLSGSAKSRANTLDRF 1752 Query: 105 ---NEGKIPLLFAHPA-SCGHGLNLQYGGNILVFFSL--WWDLEEHQQMIERIGVTRQRQ 158 N +L + G NL N +F L ++ +E + R R+ Sbjct: 1753 QSTNAATARVLLLKMNDASAAGSNLTT-ANHAIFLGPLFTNSLFNYR-AVETQAIGRVRR 1810 Query: 159 AGFKRAVFVYYLIAQNTIDELVLQRLRT 186 G ++ V ++ L+A +TID + R Sbjct: 1811 YGQQKKVHIHRLLALDTIDMTIFNTRRA 1838 >gi|242055593|ref|XP_002456942.1| hypothetical protein SORBIDRAFT_03g046010 [Sorghum bicolor] gi|241928917|gb|EES02062.1| hypothetical protein SORBIDRAFT_03g046010 [Sorghum bicolor] Length = 1175 Score = 53.8 bits (128), Expect = 1e-05, Method: Composition-based stats. Identities = 28/188 (14%), Positives = 59/188 (31%), Gaps = 39/188 (20%) Query: 32 CLQLANGAVYYDEEKHWKEVHDEK----IKALEVIIEKANAA------------------ 69 ++L D + W+ K I+ L + E N Sbjct: 953 LIELQPSYKQDDWDPDWQSTSSSKVAYLIEKLRSLRETGNNITDSVGHANTLSYQPQAVL 1012 Query: 70 -PIIVAYHFNSDLARLQKAFPQGRTLD----------KDPCTIQEWNEGKIPLLFAHPAS 118 +I+ F + +Q+ + + ++ E + + Sbjct: 1013 DKVIIFSQFLEHIHVIQQQLTIAGIIYAGMYSPMPLASKRSALMKFQEDPTCMALVMDGT 1072 Query: 119 CGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDE 178 GL+L + + + WD +Q+I R + G R + V L + T++E Sbjct: 1073 AALGLDLSFVTH-VFLMEPIWDRSMEEQVISR-----AHRMGATRPIHVETLAMRGTVEE 1126 Query: 179 LVLQRLRT 186 +L+ L+ Sbjct: 1127 QMLRLLQD 1134 >gi|163801697|ref|ZP_02195595.1| helicase, putative [Vibrio sp. AND4] gi|159174614|gb|EDP59416.1| helicase, putative [Vibrio sp. AND4] Length = 1149 Score = 53.8 bits (128), Expect = 1e-05, Method: Composition-based stats. Identities = 17/84 (20%), Positives = 36/84 (42%), Gaps = 7/84 (8%) Query: 86 KAFPQGRTLDKDPCTIQEWNEGK-IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEH 144 KA + +++ I ++ + L+ P + G GL + G N +V W+ + Sbjct: 871 KAVAKRKSVPTRKSMIADFEAKEGFNLIVMSPVAAGVGLTV-VGANHVVHLERHWNPAKE 929 Query: 145 QQMIERIGVTRQRQAGFKRAVFVY 168 Q +R+ + G ++ V +Y Sbjct: 930 AQATDRV-----YRIGQEKEVHIY 948 >gi|325287281|ref|YP_004263071.1| helicase domain-containing protein [Cellulophaga lytica DSM 7489] gi|324322735|gb|ADY30200.1| helicase domain protein [Cellulophaga lytica DSM 7489] Length = 945 Score = 53.8 bits (128), Expect = 1e-05, Method: Composition-based stats. Identities = 33/150 (22%), Positives = 57/150 (38%), Gaps = 28/150 (18%) Query: 45 EKHWKEVHDEKIKALEVIIEKA------NAAPIIVAYHFNSDLARLQKAFPQ-------- 90 +K E D K L+ +++ N II+ + L L+K + Sbjct: 411 QKIVDEKSDSKYNQLKFKLDQMGWKGKKNDERIIIFAERRATLNELEKNLTEDFGLKPKA 470 Query: 91 -----GRTLDKDPCTI-QEW--NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLE 142 G D I +++ + +I L A + G+NL Y N + + + W + Sbjct: 471 VVQFNGSLTDTQQQDILEDFSKEDSEIRLFLAS-DAGSQGVNLHYFCNQMFNYDIPWSII 529 Query: 143 EHQQMIERIGVTRQRQAGFKRAVFVYYLIA 172 Q RI + G K+ F+YYLI+ Sbjct: 530 TLDQRNGRID-----RFGQKQTPFIYYLIS 554 >gi|329121768|ref|ZP_08250385.1| SNF2 family helicase [Dialister micraerophilus DSM 19965] gi|327468238|gb|EGF13724.1| SNF2 family helicase [Dialister micraerophilus DSM 19965] Length = 888 Score = 53.8 bits (128), Expect = 1e-05, Method: Composition-based stats. Identities = 29/161 (18%), Positives = 56/161 (34%), Gaps = 28/161 (17%) Query: 53 DEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQKAFPQ----------GRTLDKDPCT 100 K +++K ++V F L ++ + G + Sbjct: 695 SPKFDKGIELVQKLVNEGKKVLVWGIFVDTLYKITNTLREKGINVNLVYGGTNKLERTIL 754 Query: 101 IQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 I E+ G + +L ++P + G ++L + V+F ++L Q +RI + G Sbjct: 755 IDEFRNGDVQVLVSNPQTLGESISLHQTVHDAVYFEYNFNLTFMLQSRDRI-----HRLG 809 Query: 161 --FKRAVFVYYLIAQ---------NTIDELVLQRLRTKSTI 190 + YYL IDE + RL+ K + Sbjct: 810 LDQNQYTRYYYLQTASENFDSFRPGYIDENIYIRLKRKEKL 850 >gi|302423432|ref|XP_003009546.1| conserved hypothetical protein [Verticillium albo-atrum VaMs.102] gi|261352692|gb|EEY15120.1| conserved hypothetical protein [Verticillium albo-atrum VaMs.102] Length = 539 Score = 53.8 bits (128), Expect = 1e-05, Method: Composition-based stats. Identities = 21/87 (24%), Positives = 39/87 (44%), Gaps = 6/87 (6%) Query: 106 EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 E + +L A +C GLNL N ++ WW+ QQ R+ + G + Sbjct: 411 EPTVKVLVATMGTCSEGLNLTC-ANRVIVVDAWWNSAREQQSFGRVV-----RTGQCKET 464 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQD 192 + L + N+ID+ + + +K+ + D Sbjct: 465 YCVRLKSPNSIDDKIERIQTSKNEVVD 491 >gi|301091941|ref|XP_002896145.1| conserved hypothetical protein [Phytophthora infestans T30-4] gi|262094965|gb|EEY53017.1| conserved hypothetical protein [Phytophthora infestans T30-4] Length = 1481 Score = 53.8 bits (128), Expect = 1e-05, Method: Composition-based stats. Identities = 31/214 (14%), Positives = 67/214 (31%), Gaps = 38/214 (17%) Query: 12 YCDLQGENIEAFNSASKTVK--CLQLANGAVYYDEEKHWKEVH------DEKIKALEVII 63 C ++ I AS++ + G + H +H K+ AL + Sbjct: 1126 VCAIENVTIVVERLASESTSINLEDFSQGEAISEVPSHPSPLHCDGGSLGSKLDALLERV 1185 Query: 64 E----KANAAPIIVAYHFNSDLARLQKAFPQGR-------TLDKDPCTIQEWNEGKIPLL 112 E + + ++ ++ L + + + T + P + ++ + Sbjct: 1186 EMLRQENPSVKCLLFSQWSQMLELVMQPLRRVGVYCFMYGTKRQLPKLLAQFQACPAACV 1245 Query: 113 FAHP-ASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLI 171 A P +GLN+ +L Q + R+ + G R V+ I Sbjct: 1246 LALPFKVGANGLNIVEATEVL-LIEPLLSSSIEAQAVNRV-----HRLGQTRQTRVHRFI 1299 Query: 172 AQNTIDELVLQR------------LRTKSTIQDL 193 Q +++E + + +K I D Sbjct: 1300 VQGSVEERIFRLGHKLKDHGAEDDQESKEEINDE 1333 >gi|28199206|ref|NP_779520.1| hypothetical protein PD1321 [Xylella fastidiosa Temecula1] gi|182681936|ref|YP_001830096.1| hypothetical protein XfasM23_1406 [Xylella fastidiosa M23] gi|28057312|gb|AAO29169.1| phage-related protein [Xylella fastidiosa Temecula1] gi|182632046|gb|ACB92822.1| hypothetical protein XfasM23_1406 [Xylella fastidiosa M23] gi|307578194|gb|ADN62163.1| hypothetical protein XFLM_00705 [Xylella fastidiosa subsp. fastidiosa GB514] Length = 55 Score = 53.8 bits (128), Expect = 1e-05, Method: Composition-based stats. Identities = 17/38 (44%), Positives = 29/38 (76%) Query: 164 AVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 VF+++++A +T+DELV+ R +K +QDLLL A+K+ Sbjct: 4 PVFIHHIVAADTVDELVMVRRESKREVQDLLLEAVKRR 41 >gi|70932532|ref|XP_737773.1| hypothetical protein [Plasmodium chabaudi chabaudi] gi|56513438|emb|CAH86839.1| hypothetical protein PC302186.00.0 [Plasmodium chabaudi chabaudi] Length = 99 Score = 53.8 bits (128), Expect = 1e-05, Method: Composition-based stats. Identities = 13/51 (25%), Positives = 24/51 (47%) Query: 143 EHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDL 193 + +R R + G K+ V++Y L +NTI+E V + + K + Sbjct: 2 DWNPPNDRQAEDRVHRLGQKKEVYIYRLCCKNTIEETVFKCCKAKLHLDQA 52 >gi|323969194|gb|EGB64496.1| hypothetical protein ERHG_04662 [Escherichia coli TA007] Length = 2255 Score = 53.8 bits (128), Expect = 1e-05, Method: Composition-based stats. Identities = 23/105 (21%), Positives = 42/105 (40%), Gaps = 5/105 (4%) Query: 98 PCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 ++ EG+ P++ + G+NL G + +L W Q R Sbjct: 1461 EKIAADFQEGRTPIIICN-KKAEVGINLHRGTTDIHHLTLPWTPASIAQRNGRGARVGSN 1519 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKET 202 +A +V V+Y + + DE L+ L+ K+ +L + K E Sbjct: 1520 RA----SVRVHYYCGKGSFDEYRLKTLKRKAGWISDILRSDKSEM 1560 >gi|46401635|ref|YP_006479.1| DarB [Enterobacteria phage P1] gi|33338662|gb|AAQ13985.1| DarB [Enterobacteria phage P1] gi|33338771|gb|AAQ14093.1| DarB [Enterobacteria phage P1] Length = 2255 Score = 53.8 bits (128), Expect = 1e-05, Method: Composition-based stats. Identities = 23/105 (21%), Positives = 42/105 (40%), Gaps = 5/105 (4%) Query: 98 PCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 ++ EG+ P++ + G+NL G + +L W Q R Sbjct: 1461 EKIAADFQEGRTPIIICN-KKAEVGINLHRGTTDIHHLTLPWTPASIAQRNGRGARVGSN 1519 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKET 202 +A +V V+Y + + DE L+ L+ K+ +L + K E Sbjct: 1520 RA----SVRVHYYCGKGSFDEYRLKTLKRKAGWISDILRSDKSEM 1560 >gi|324111110|gb|EGC05096.1| hypothetical protein ERIG_04245 [Escherichia fergusonii B253] Length = 2255 Score = 53.8 bits (128), Expect = 1e-05, Method: Composition-based stats. Identities = 23/105 (21%), Positives = 42/105 (40%), Gaps = 5/105 (4%) Query: 98 PCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 ++ EG+ P++ + G+NL G + +L W Q R Sbjct: 1461 EKIAADFQEGRTPIIICN-KKAEVGINLHRGTTDIHHLTLPWTPASIAQRNGRGARVGSN 1519 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKET 202 +A +V V+Y + + DE L+ L+ K+ +L + K E Sbjct: 1520 RA----SVRVHYYCGKGSFDEYRLKTLKRKAGWISDILRSDKSEM 1560 >gi|260871137|ref|YP_003237917.1| defense against restriction protein [Escherichia coli O111:H- str. 11128] gi|257767716|dbj|BAI39209.1| defense against restriction protein [Escherichia coli O111:H- str. 11128] Length = 2255 Score = 53.8 bits (128), Expect = 1e-05, Method: Composition-based stats. Identities = 23/105 (21%), Positives = 42/105 (40%), Gaps = 5/105 (4%) Query: 98 PCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 ++ EG+ P++ + G+NL G + +L W Q R Sbjct: 1461 EKIAADFQEGRTPIIICN-KKAEVGINLHRGTTDIHHLTLPWTPASIAQRNGRGARVGSN 1519 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKET 202 +A +V V+Y + + DE L+ L+ K+ +L + K E Sbjct: 1520 RA----SVRVHYYCGKGSFDEYRLKTLKRKAGWISDILRSDKSEM 1560 >gi|33323519|gb|AAQ07489.1|AF503408_13 DarB [Enterobacteria phage P7] Length = 2255 Score = 53.8 bits (128), Expect = 1e-05, Method: Composition-based stats. Identities = 23/105 (21%), Positives = 42/105 (40%), Gaps = 5/105 (4%) Query: 98 PCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 ++ EG+ P++ + G+NL G + +L W Q R Sbjct: 1461 EKIAADFQEGRTPIIICN-KKAEVGINLHRGTTDIHHLTLPWTPASIAQRNGRGARVGSN 1519 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKET 202 +A +V V+Y + + DE L+ L+ K+ +L + K E Sbjct: 1520 RA----SVRVHYYCGKGSFDEYRLKTLKRKAGWISDILRSDKSEM 1560 >gi|120610429|ref|YP_970107.1| DNA methylase N-4/N-6 domain-containing protein [Acidovorax citrulli AAC00-1] gi|120588893|gb|ABM32333.1| DNA methylase N-4/N-6 domain protein [Acidovorax citrulli AAC00-1] Length = 835 Score = 53.8 bits (128), Expect = 1e-05, Method: Composition-based stats. Identities = 29/147 (19%), Positives = 56/147 (38%), Gaps = 13/147 (8%) Query: 54 EKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQG------RTLDKDPCTIQEWNEG 107 +I + I+ ++ + + LQ+A P+ + LD+ I + +G Sbjct: 300 ARIDKVREIVNADPQDSFVIWHDLEDERHALQEAIPEAVSVWGTQDLDEREDRIVGFGDG 359 Query: 108 KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFV 167 LL P G G N Q + VF + + + Q I R+ + G + V + Sbjct: 360 AFRLLSTKPVIAGAGCNFQRHCHREVFAGIGFKFRDFIQAIHRV-----HRFGQTKPVRI 414 Query: 168 YYLIAQNTIDELVLQRLRTKSTIQDLL 194 + + + VL+ L+ K D + Sbjct: 415 DIIHTE--AEREVLRTLQEKWRQHDEV 439 >gi|331649967|ref|ZP_08351043.1| conserved hypothetical protein [Escherichia coli M605] gi|331041224|gb|EGI13378.1| conserved hypothetical protein [Escherichia coli M605] Length = 2255 Score = 53.8 bits (128), Expect = 1e-05, Method: Composition-based stats. Identities = 23/105 (21%), Positives = 42/105 (40%), Gaps = 5/105 (4%) Query: 98 PCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 ++ EG+ P++ + G+NL G + +L W Q R Sbjct: 1461 EKIAADFQEGRTPIIICN-KKAEVGINLHRGTTDIHHLTLPWTPASIAQRNGRGARVGSN 1519 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKET 202 +A +V V+Y + + DE L+ L+ K+ +L + K E Sbjct: 1520 RA----SVRVHYYCGKGSFDEYRLKTLKRKAGWISDILRSDKSEM 1560 >gi|300361150|ref|ZP_07057327.1| SNF2 family helicase [Lactobacillus gasseri JV-V03] gi|300353769|gb|EFJ69640.1| SNF2 family helicase [Lactobacillus gasseri JV-V03] Length = 630 Score = 53.8 bits (128), Expect = 1e-05, Method: Composition-based stats. Identities = 31/161 (19%), Positives = 62/161 (38%), Gaps = 24/161 (14%) Query: 61 VIIEK--ANAAPIIVAYHFNSDLARLQKAFPQ----------GRTLDKDPCTIQEWNEGK 108 +IEK A ++V F + ++ + D I + G Sbjct: 455 NLIEKLVAQGKKVLVWGMFVGTMQKIADTLNEKGINTTLIYGATPKDDREKMIDNFRTGD 514 Query: 109 IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVY 168 +L ++P + G ++L + V+F ++L Q +RI Q + R Y Sbjct: 515 AQVLVSNPNTLGESISLHQTVHDAVYFEYNFNLTFMLQSRDRINRLGLPQNQYTR---YY 571 Query: 169 YLIAQNT------IDELVLQRLRTKSTIQDLLLNALKKETI 203 YL+ + ID V ++L+ K + +L+A+ + + Sbjct: 572 YLMTKGDIAHMGFIDSTVYRKLKDKEKV---MLDAIDGQLL 609 >gi|315050244|ref|XP_003174496.1| DNA repair protein rad8 [Arthroderma gypseum CBS 118893] gi|311339811|gb|EFQ99013.1| DNA repair protein rad8 [Arthroderma gypseum CBS 118893] Length = 2118 Score = 53.8 bits (128), Expect = 1e-05, Method: Composition-based stats. Identities = 29/152 (19%), Positives = 60/152 (39%), Gaps = 21/152 (13%) Query: 54 EKIKALEVIIEKANAAP----IIVAYHFNSDLARLQKAFPQGRTL-------DKDPCT-I 101 K A+ ++++ P +++ F + KA D+ P + I Sbjct: 1923 SKFTAVIDLLQEPEKIPMDDQVLLFIQFPELMDAASKALGSAGIPYIVVQPGDRAPASKI 1982 Query: 102 QEWNEGKIPL----LFAHPAS-CGHGLNLQYGGNILVFFSL--WWDLEEHQQMIERIGVT 154 E+ GK + L + GLNLQ N ++FF ++ + + Sbjct: 1983 SEFQNGKESVKSKVLILNLGDVTASGLNLQN-ANHIIFFGPLVAQSQYDYDSGMA-QAIG 2040 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRT 186 R R+ G + V +Y+++A T++ + ++ R Sbjct: 2041 RSRRYGQLKHVHIYHVLALKTVEVNIFEQRRR 2072 >gi|325495636|gb|EGC93500.1| DarB [Escherichia fergusonii ECD227] Length = 2221 Score = 53.8 bits (128), Expect = 1e-05, Method: Composition-based stats. Identities = 23/105 (21%), Positives = 42/105 (40%), Gaps = 5/105 (4%) Query: 98 PCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 ++ EG+ P++ + G+NL G + +L W Q R Sbjct: 1427 EKIAADFQEGRTPIIICN-KKAEVGINLHRGTTDIHHLTLPWTPASIAQRNGRGARVGSN 1485 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKET 202 +A +V V+Y + + DE L+ L+ K+ +L + K E Sbjct: 1486 RA----SVRVHYYCGKGSFDEYRLKTLKRKAGWISDILRSDKSEM 1526 >gi|302388025|ref|YP_003823847.1| SNF2-related protein [Clostridium saccharolyticum WM1] gi|302198653|gb|ADL06224.1| SNF2-related protein [Clostridium saccharolyticum WM1] Length = 2455 Score = 53.8 bits (128), Expect = 1e-05, Method: Composition-based stats. Identities = 20/91 (21%), Positives = 34/91 (37%), Gaps = 4/91 (4%) Query: 107 GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVF 166 G++ +L G G N+Q + + W + Q RI RQ + V Sbjct: 2093 GQVRVLLGSTQKMGAGTNVQDRLVAVHHLDVGWRPADMTQRNGRII----RQGNRNKEVQ 2148 Query: 167 VYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 VY + + T D + Q L K ++ + Sbjct: 2149 VYQYVTEGTFDAYLYQTLENKQKFISQIMTS 2179 >gi|257067735|ref|YP_003153990.1| DNA/RNA helicase, superfamily II, SNF2 family [Brachybacterium faecium DSM 4810] gi|256558553|gb|ACU84400.1| DNA/RNA helicase, superfamily II, SNF2 family [Brachybacterium faecium DSM 4810] Length = 961 Score = 53.8 bits (128), Expect = 1e-05, Method: Composition-based stats. Identities = 21/105 (20%), Positives = 45/105 (42%), Gaps = 9/105 (8%) Query: 94 LDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGV 153 +D+ + + + + + G+NLQ+ ++LV + L W+ + +Q I R+ Sbjct: 491 VDRRKALVDYF--REQGTIMIATEAAAEGINLQF-CSMLVNYDLPWNPQRVEQRIGRV-- 545 Query: 154 TRQRQAGFKRAVFVYYLIAQNTI-DELVLQRLRTKSTIQDLLLNA 197 + G K V V + I ++ +L+ L K + + A Sbjct: 546 ---HRFGQKHNVVVVNFSNKGNIAEQRILELLTNKFQLFSSVFGA 587 >gi|283796708|ref|ZP_06345861.1| protein, SNF2 family [Clostridium sp. M62/1] gi|291075592|gb|EFE12956.1| protein, SNF2 family [Clostridium sp. M62/1] Length = 2454 Score = 53.8 bits (128), Expect = 1e-05, Method: Composition-based stats. Identities = 20/91 (21%), Positives = 34/91 (37%), Gaps = 4/91 (4%) Query: 107 GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVF 166 G++ +L G G N+Q + + W + Q RI RQ + V Sbjct: 2092 GQVRVLLGSTQKMGAGTNVQDRLVAVHHLDVGWRPADMTQRNGRII----RQGNRNKEVQ 2147 Query: 167 VYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 VY + + T D + Q L K ++ + Sbjct: 2148 VYQYVTEGTFDAYLYQTLENKQKFISQIMTS 2178 >gi|225374536|ref|ZP_03751757.1| hypothetical protein ROSEINA2194_00151 [Roseburia inulinivorans DSM 16841] gi|257438036|ref|ZP_05613791.1| N-domain protein, SNF2 family [Faecalibacterium prausnitzii A2-165] gi|225213596|gb|EEG95950.1| hypothetical protein ROSEINA2194_00151 [Roseburia inulinivorans DSM 16841] gi|257199696|gb|EEU97980.1| N-domain protein, SNF2 family [Faecalibacterium prausnitzii A2-165] Length = 2454 Score = 53.8 bits (128), Expect = 1e-05, Method: Composition-based stats. Identities = 20/91 (21%), Positives = 34/91 (37%), Gaps = 4/91 (4%) Query: 107 GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVF 166 G++ +L G G N+Q + + W + Q RI RQ + V Sbjct: 2092 GQVRVLLGSTQKMGAGTNVQDRLVAVHHLDVGWRPADMTQRNGRII----RQGNRNKEVQ 2147 Query: 167 VYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 VY + + T D + Q L K ++ + Sbjct: 2148 VYQYVTEGTFDAYLYQTLENKQKFISQIMTS 2178 >gi|326915689|ref|XP_003204146.1| PREDICTED: e3 ubiquitin-protein ligase SHPRH-like, partial [Meleagris gallopavo] Length = 118 Score = 53.8 bits (128), Expect = 1e-05, Method: Composition-based stats. Identities = 17/81 (20%), Positives = 35/81 (43%), Gaps = 6/81 (7%) Query: 106 EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 + KI +L + +GLN+ ++L + Q I R+ + G ++ Sbjct: 9 DPKINILLLPLHTGSNGLNIIEATHVL-LVEPILNPAHELQAIGRV-----HRIGQTKST 62 Query: 166 FVYYLIAQNTIDELVLQRLRT 186 V+ + + TI+E + L+T Sbjct: 63 IVHRFLIKATIEERMQTMLKT 83 >gi|306836192|ref|ZP_07469176.1| helicase [Corynebacterium accolens ATCC 49726] gi|304567913|gb|EFM43494.1| helicase [Corynebacterium accolens ATCC 49726] Length = 997 Score = 53.8 bits (128), Expect = 1e-05, Method: Composition-based stats. Identities = 23/105 (21%), Positives = 44/105 (41%), Gaps = 11/105 (10%) Query: 95 DKDPCTIQEW-NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGV 153 D+ + + G I + + G+NLQ+ ++L+ + L W+ + +Q I RI Sbjct: 528 DRRKALVDYFRESGSIMIA---TEAASEGINLQF-CSMLINYDLPWNPQRVEQRIGRI-- 581 Query: 154 TRQRQAGFKRAVFVYYLIAQNTIDE-LVLQRLRTKSTIQDLLLNA 197 + G K V + + E +L+ L K + D + A Sbjct: 582 ---HRYGQKHDVVIVNFFNEGNAAEARILELLENKFHLFDSVFGA 623 >gi|237708935|ref|ZP_04539416.1| helicase domain-containing protein [Bacteroides sp. 9_1_42FAA] gi|229456997|gb|EEO62718.1| helicase domain-containing protein [Bacteroides sp. 9_1_42FAA] Length = 959 Score = 53.8 bits (128), Expect = 1e-05, Method: Composition-based stats. Identities = 18/70 (25%), Positives = 36/70 (51%), Gaps = 6/70 (8%) Query: 122 GLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNT--IDEL 179 G+NLQ G N ++ + L W+ +Q RI Q ++ V ++ L ++T +D++ Sbjct: 551 GVNLQTGFNCVIHYDLPWNPNRMEQRNGRIDRFGQ----TEKEVAIFTLFDEDTNPVDKI 606 Query: 180 VLQRLRTKST 189 +++ L K Sbjct: 607 IMKVLYRKQN 616 >gi|323186569|gb|EFZ71913.1| helicase conserved C-terminal domain protein [Escherichia coli 1357] Length = 2221 Score = 53.8 bits (128), Expect = 1e-05, Method: Composition-based stats. Identities = 23/105 (21%), Positives = 42/105 (40%), Gaps = 5/105 (4%) Query: 98 PCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 ++ EG+ P++ + G+NL G + +L W Q R Sbjct: 1427 EKIAADFQEGRTPIIICN-KKAEVGINLHRGTTDIHHLTLPWTPASIAQRNGRGARVGSN 1485 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKET 202 +A +V V+Y + + DE L+ L+ K+ +L + K E Sbjct: 1486 RA----SVRVHYYCGKGSFDEYRLKTLKRKAGWISDILRSDKSEM 1526 >gi|266621003|ref|ZP_06113938.1| conserved hypothetical protein [Clostridium hathewayi DSM 13479] gi|288867319|gb|EFC99617.1| conserved hypothetical protein [Clostridium hathewayi DSM 13479] Length = 406 Score = 53.8 bits (128), Expect = 1e-05, Method: Composition-based stats. Identities = 29/154 (18%), Positives = 57/154 (37%), Gaps = 9/154 (5%) Query: 36 ANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLD 95 A G Y + + AL I+EK I+ Y+F+ +L L++ F + Sbjct: 251 AAGLCYV--WRKIVNTDQSRQIALLEIVEKH--PKAIIFYNFDYELELLKEIFSGYEVRE 306 Query: 96 KDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTR 155 + Q + + G N + ++F+S + + Q RI Sbjct: 307 WNGHKHQPVPTSDAWVYLVQYNAGAEGWNC-ITTDTIIFYSQNYSYKIMAQSAGRIDRMN 365 Query: 156 QRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKST 189 ++ Y+L +++ ID + + L+ K T Sbjct: 366 TPYT----DLYYYHLKSRSGIDLAISKALKDKKT 395 >gi|148654631|ref|YP_001274836.1| helicase domain-containing protein [Roseiflexus sp. RS-1] gi|148566741|gb|ABQ88886.1| helicase domain protein [Roseiflexus sp. RS-1] Length = 986 Score = 53.8 bits (128), Expect = 1e-05, Method: Composition-based stats. Identities = 19/67 (28%), Positives = 34/67 (50%), Gaps = 3/67 (4%) Query: 122 GLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVL 181 G+NLQ+ + +V + L W+ +Q R+ Q ++ R V +Y N +DE V+ Sbjct: 570 GINLQHSFDAVVHYDLPWNPNRLEQREGRVDRYGQ-RSAVVRTVLIYG--QDNPMDEAVM 626 Query: 182 QRLRTKS 188 + L K+ Sbjct: 627 KVLLRKA 633 >gi|188994741|ref|YP_001928993.1| SNF2-related helicase [Porphyromonas gingivalis ATCC 33277] gi|188594421|dbj|BAG33396.1| SNF2-related helicase [Porphyromonas gingivalis ATCC 33277] Length = 965 Score = 53.8 bits (128), Expect = 1e-05, Method: Composition-based stats. Identities = 27/152 (17%), Positives = 58/152 (38%), Gaps = 21/152 (13%) Query: 59 LEVIIEKANAAPIIVAYHFNSDLA--RLQKAFPQG----------RTLDKDPCTIQEWNE 106 L ++ E+ ++ N+D R+ + + + + D + E+ Sbjct: 442 LRLLSERGYEGQVMTFSGTNNDARSTRILRRWREANQDTGLVTGVKEADMRAALVDEFRH 501 Query: 107 GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVF 166 + + G+NLQ+ +++V + L W+ + +Q I R + G + V Sbjct: 502 RAT--IMIATEAAAEGINLQF-CSLVVNYDLPWNPQRIEQRIGRC-----HRYGQRHDVV 553 Query: 167 VYYLIAQ-NTIDELVLQRLRTKSTIQDLLLNA 197 V + + N D V + L K + D + A Sbjct: 554 VINFLNKSNAADRRVYELLDEKFRLFDGVFGA 585 >gi|13242495|ref|NP_077508.1| EsV-1-23 [Ectocarpus siliculosus virus 1] gi|13177305|gb|AAK14449.1|AF204951_23 EsV-1-23 [Ectocarpus siliculosus virus 1] Length = 612 Score = 53.8 bits (128), Expect = 1e-05, Method: Composition-based stats. Identities = 34/154 (22%), Positives = 58/154 (37%), Gaps = 31/154 (20%) Query: 68 AAPIIVAYH------FNSDLARLQK----AFPQGRTLDKDPCTIQE------WNEGKIPL 111 ++ AYH ++ RL PQ T + D + +N G++ L Sbjct: 444 GRLLLYAYHRDTITDLEGEIRRLCADKNIVSPQISTYNGDTSARERMRIKEAFNNGEMDL 503 Query: 112 LFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKR---AVFVY 168 L + GL+LQ + + F LWW++ + Q+I R + K V+VY Sbjct: 504 LIIS-KAGSVGLDLQC-TSKVFMFDLWWNIPQMNQVIGRAIRFKSHHEPCKHKHVDVYVY 561 Query: 169 Y--LIAQNTIDELVLQRLRTKSTIQDLLLNALKK 200 + + Q K +L +A+KK Sbjct: 562 QSVFVTK--------QAKGVKVFDAQVLFDAVKK 587 >gi|120610367|ref|YP_970045.1| DNA methylase N-4/N-6 domain-containing protein [Acidovorax citrulli AAC00-1] gi|120588831|gb|ABM32271.1| DNA methylase N-4/N-6 domain protein [Acidovorax citrulli AAC00-1] Length = 835 Score = 53.8 bits (128), Expect = 2e-05, Method: Composition-based stats. Identities = 28/147 (19%), Positives = 57/147 (38%), Gaps = 13/147 (8%) Query: 54 EKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQG------RTLDKDPCTIQEWNEG 107 +I + I++ ++ + + LQ A P+ + LD+ I + +G Sbjct: 300 ARIDKVREIVDADPRDSFVIWHDLEDERHALQDAIPEAVSVWGTQDLDEREDRIVGFGDG 359 Query: 108 KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFV 167 LL P G G N Q + VF + + + Q I R+ + G + V + Sbjct: 360 AFRLLSTKPVIAGAGCNFQRHCHREVFAGIGFKFRDFIQAIHRV-----HRFGQTKPVRI 414 Query: 168 YYLIAQNTIDELVLQRLRTKSTIQDLL 194 + + + VL++++ K D + Sbjct: 415 DIIHTE--AEREVLRKMQEKWRQHDEV 439 >gi|256025065|ref|ZP_05438930.1| Helicase [Escherichia sp. 4_1_40B] Length = 949 Score = 53.8 bits (128), Expect = 2e-05, Method: Composition-based stats. Identities = 23/113 (20%), Positives = 45/113 (39%), Gaps = 9/113 (7%) Query: 86 KAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQ 145 T D ++++ L + G+NLQ+ ++L+ + L W+ + + Sbjct: 472 GRVSGSSTADMKAALVEKF--RDEGTLMICTEAGAEGINLQF-CSLLINYDLPWNPQRVE 528 Query: 146 QMIERIGVTRQRQAGFKRAVFVYYLIAQNTI-DELVLQRLRTKSTIQDLLLNA 197 Q I R+ + G K V V I + D+ V + L K + + + A Sbjct: 529 QRIGRV-----HRYGQKHDVVVVNFINKGNRADQRVFELLSQKFQLFEGVFGA 576 >gi|87307450|ref|ZP_01089594.1| Helicase, C-terminal [Blastopirellula marina DSM 3645] gi|87289620|gb|EAQ81510.1| Helicase, C-terminal [Blastopirellula marina DSM 3645] Length = 1214 Score = 53.8 bits (128), Expect = 2e-05, Method: Composition-based stats. Identities = 23/102 (22%), Positives = 39/102 (38%), Gaps = 4/102 (3%) Query: 96 KDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTR 155 K ++ +G + +L A G G N+Q L W E +Q RI Sbjct: 792 KKQALFEKVRQGTVRVLLGSTAKMGTGTNVQKRLIALHHLDAPWKPAEVEQRDGRIL--- 848 Query: 156 QRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 RQ + V +Y + + + D + Q L TK+ ++ Sbjct: 849 -RQGNQNKEVAIYRYVTEGSFDAYMWQALETKARFISQVITG 889 >gi|218696569|ref|YP_002404236.1| Helicase [Escherichia coli 55989] gi|218353301|emb|CAU99275.1| Helicase [Escherichia coli 55989] Length = 955 Score = 53.8 bits (128), Expect = 2e-05, Method: Composition-based stats. Identities = 23/113 (20%), Positives = 45/113 (39%), Gaps = 9/113 (7%) Query: 86 KAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQ 145 T D ++++ L + G+NLQ+ ++L+ + L W+ + + Sbjct: 478 GRVSGSSTADMKAALVEKF--RDEGTLMICTEAGAEGINLQF-CSLLINYDLPWNPQRVE 534 Query: 146 QMIERIGVTRQRQAGFKRAVFVYYLIAQNTI-DELVLQRLRTKSTIQDLLLNA 197 Q I R+ + G K V V I + D+ V + L K + + + A Sbjct: 535 QRIGRV-----HRYGQKHDVVVVNFINKGNRADQRVFELLSQKFQLFEGVFGA 582 >gi|302387900|ref|YP_003823722.1| helicase domain protein [Clostridium saccharolyticum WM1] gi|302198528|gb|ADL06099.1| helicase domain protein [Clostridium saccharolyticum WM1] Length = 2632 Score = 53.8 bits (128), Expect = 2e-05, Method: Composition-based stats. Identities = 30/171 (17%), Positives = 58/171 (33%), Gaps = 20/171 (11%) Query: 27 SKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQK 86 + + QL ++ D+ + +A + ++ P +A F D Sbjct: 2075 TAENRLTQL----IFCDQGTPKGDGSFNFYEATKAVLIAQGVKPEEIA--FIHD------ 2122 Query: 87 AFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 +T + ++ G+I +L G G+N+Q L + W + Q Sbjct: 2123 ----AKTDVQREQLFEKVRTGEIRILMGSTGKMGTGMNVQNKLVALHHLDVPWRPSDLIQ 2178 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 RI RQ + ++ I +NT D + Q L K ++ Sbjct: 2179 RNGRIL----RQGNDNEEISIFNYITENTFDAYLWQILEQKQRYISQIMTG 2225 >gi|157157048|ref|YP_001464327.1| SNF2 family helicase [Escherichia coli E24377A] gi|157079078|gb|ABV18786.1| helicase, SNF2 family [Escherichia coli E24377A] Length = 951 Score = 53.8 bits (128), Expect = 2e-05, Method: Composition-based stats. Identities = 23/113 (20%), Positives = 45/113 (39%), Gaps = 9/113 (7%) Query: 86 KAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQ 145 T D ++++ L + G+NLQ+ ++L+ + L W+ + + Sbjct: 474 GRVSGSSTADMKAALVEKF--RDEGTLMICTEAGAEGINLQF-CSLLINYDLPWNPQRVE 530 Query: 146 QMIERIGVTRQRQAGFKRAVFVYYLIAQNTI-DELVLQRLRTKSTIQDLLLNA 197 Q I R+ + G K V V I + D+ V + L K + + + A Sbjct: 531 QRIGRV-----HRYGQKHDVVVVNFINKGNRADQRVFELLSQKFQLFEGVFGA 578 >gi|296813227|ref|XP_002846951.1| DNA repair protein rad8 [Arthroderma otae CBS 113480] gi|238842207|gb|EEQ31869.1| DNA repair protein rad8 [Arthroderma otae CBS 113480] Length = 1955 Score = 53.8 bits (128), Expect = 2e-05, Method: Composition-based stats. Identities = 31/171 (18%), Positives = 64/171 (37%), Gaps = 25/171 (14%) Query: 37 NGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAP----IIVAYHF---------NSDLAR 83 Y +++ + K A+ +++ P +++ F LA Sbjct: 1744 CHFDYNAQDRELAKYGSSKFTAVINLLQDTKKIPGDDQVLLFIQFPELMDAAATALQLAN 1803 Query: 84 LQKAFPQGRTLDKDPCT-IQEWNEGKI----PLLFAHPAS-CGHGLNLQYGGNILVFFSL 137 + Q D+ P I E+ GK +L + GLNLQ N ++FF Sbjct: 1804 IPHIVVQPG--DRTPGGKISEFQNGKETVKSKVLILNLGDVTASGLNLQN-ANHIIFFGP 1860 Query: 138 --WWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRT 186 ++ + + R R+ G + V +Y+++A T++ + ++ R Sbjct: 1861 LVARSQYDYDSGMA-QAIGRSRRYGQLKHVHIYHVLALRTVEVNIFEQRRR 1910 >gi|86156995|ref|YP_463780.1| RNA polymerase associated protein rapA [Anaeromyxobacter dehalogenans 2CP-C] gi|85773506|gb|ABC80343.1| RNA polymerase associated protein rapA [Anaeromyxobacter dehalogenans 2CP-C] Length = 898 Score = 53.8 bits (128), Expect = 2e-05, Method: Composition-based stats. Identities = 36/185 (19%), Positives = 65/185 (35%), Gaps = 26/185 (14%) Query: 15 LQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKAN--AAPII 72 L E + +S+ ++ ++ GA + EK KAL + + ++ Sbjct: 345 LLAHLAERYGLSSRLIRNRRVKVGAFTSRALRRVDVGEGEKPKALVDLCARLARAGDKVL 404 Query: 73 VAYHFNSDLARLQKA-------------FPQGRTLDKDPCTIQEWNEGKIPLLFAHPASC 119 V F DL L+ + +L+ + + + + P+L S Sbjct: 405 V---FGGDLEALRGLQGGLAEAGLEALLYDDAPSLEARDRLVARFRDPEGPMLLLSGESG 461 Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 G G N Q+ + LV L +Q I R+ + G R V ++ + DE Sbjct: 462 GEGRNFQF-AHHLVCADLPASPLVLEQRIGRLD-----RLGQTRPVEIHVPVEPG--DEA 513 Query: 180 VLQRL 184 L L Sbjct: 514 FLADL 518 >gi|315043012|ref|XP_003170882.1| hypothetical protein MGYG_06873 [Arthroderma gypseum CBS 118893] gi|311344671|gb|EFR03874.1| hypothetical protein MGYG_06873 [Arthroderma gypseum CBS 118893] Length = 1118 Score = 53.4 bits (127), Expect = 2e-05, Method: Composition-based stats. Identities = 17/90 (18%), Positives = 39/90 (43%), Gaps = 16/90 (17%) Query: 119 CGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDE 178 HGL++ + + + WD Q I+R + R V+V L+ ++T+++ Sbjct: 895 ASHGLHI-AAASRVFIVNPIWDPNIESQAIKR-----AHRISQTRPVYVETLVLKDTLED 948 Query: 179 LVLQRLR----------TKSTIQDLLLNAL 198 +L+R + K + D ++++ Sbjct: 949 KMLRRRKAMTSTEMQHAEKDMLDDGTMSSI 978 >gi|330824390|ref|YP_004387693.1| SNF2-like protein [Alicycliphilus denitrificans K601] gi|329309762|gb|AEB84177.1| SNF2-related protein [Alicycliphilus denitrificans K601] Length = 959 Score = 53.4 bits (127), Expect = 2e-05, Method: Composition-based stats. Identities = 24/113 (21%), Positives = 48/113 (42%), Gaps = 11/113 (9%) Query: 87 AFPQGRTLDKDPCTIQEWNE-GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQ 145 +T D ++ + E GK+ + + G+NLQ+ ++++ + L W+ + + Sbjct: 483 RITGSKTADTRAALVEHFKERGKVMIA---TEAGAEGINLQF-CSLVINYDLPWNPQRIE 538 Query: 146 QMIERIGVTRQRQAGFKRAVFVYYLIAQ-NTIDELVLQRLRTKSTIQDLLLNA 197 Q I R + G K V V + + N D V + L K + + + A Sbjct: 539 QRIGRC-----HRYGQKHDVVVVNFVDRSNEADARVYELLSQKFQLFEGVFGA 586 >gi|258545975|ref|ZP_05706209.1| helicase/SNF2 domain protein [Cardiobacterium hominis ATCC 15826] gi|258518780|gb|EEV87639.1| helicase/SNF2 domain protein [Cardiobacterium hominis ATCC 15826] Length = 937 Score = 53.4 bits (127), Expect = 2e-05, Method: Composition-based stats. Identities = 24/114 (21%), Positives = 47/114 (41%), Gaps = 9/114 (7%) Query: 85 QKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEH 144 + + DK I + ++ A + G+NLQ+ ++L+ + L W+ + Sbjct: 463 RNRITGAVSADKRAALIDRFRH-DAQIMIA-TEAAAEGVNLQF-CSLLINYDLPWNPQRV 519 Query: 145 QQMIERIGVTRQRQAGFKRAVFVYYLIA-QNTIDELVLQRLRTKSTIQDLLLNA 197 +Q I R + G + V V + +N D+ +L+ L K + L A Sbjct: 520 EQRIGRC-----HRYGQESDVVVINFLNRRNEADKRILELLTEKFQLFSGLFGA 568 >gi|224008246|ref|XP_002293082.1| Hypothetical protein THAPSDRAFT_263934 [Thalassiosira pseudonana CCMP1335] gi|220971208|gb|EED89543.1| Hypothetical protein THAPSDRAFT_263934 [Thalassiosira pseudonana CCMP1335] Length = 434 Score = 53.4 bits (127), Expect = 2e-05, Method: Composition-based stats. Identities = 22/108 (20%), Positives = 38/108 (35%), Gaps = 12/108 (11%) Query: 83 RLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLE 142 R+ + P D+ + I L + G GL L + ++F L W Sbjct: 335 RIDGSVPPA---DRALRVRKFQTNDSIRLAILSMTAAGVGLTLT-AASSIIFTELHWVPG 390 Query: 143 EHQQMIERIGVTRQRQAGFKRAVFVYYLIAQN---TIDELVLQRLRTK 187 Q +R + G AV + Y I ++ ++D + L K Sbjct: 391 VLAQAEDRC-----HRIGQVNAVNIMYAICKDEDVSVDRSLWAMLGRK 433 >gi|72390878|ref|XP_845733.1| hypothetical protein [Trypanosoma brucei TREU927] gi|62175831|gb|AAX69958.1| hypothetical protein, conserved [Trypanosoma brucei] gi|70802269|gb|AAZ12174.1| hypothetical protein, conserved [Trypanosoma brucei brucei strain 927/4 GUTat10.1] Length = 1541 Score = 53.4 bits (127), Expect = 2e-05, Method: Composition-based stats. Identities = 34/163 (20%), Positives = 57/163 (34%), Gaps = 41/163 (25%) Query: 54 EKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGR-----TLDKDPCTIQE----- 103 I+ LE I ++A ++V + L + A + +D +Q Sbjct: 1343 RLIQLLEDIWDEAPDDNVLVFSKVPAILQMGEAALKEAGYQNVHVIDNHVTLVQRKKIFA 1402 Query: 104 -----------------------WNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWD 140 N G +LF GLNL + N L+F + Sbjct: 1403 QLHANAATTASATGSASGSTPSGNNRGH--VLFLSSRVACSGLNLVF-ANRLIFMEPNLN 1459 Query: 141 LEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQR 183 +HQQ + RI + G + +VY + A TI+E ++ R Sbjct: 1460 PAQHQQAVGRID-----RCGQLKRTYVYVMYAPRTIEERIMNR 1497 >gi|317129326|ref|YP_004095608.1| type III restriction protein res subunit [Bacillus cellulosilyticus DSM 2522] gi|315474274|gb|ADU30877.1| type III restriction protein res subunit [Bacillus cellulosilyticus DSM 2522] Length = 553 Score = 53.4 bits (127), Expect = 2e-05, Method: Composition-based stats. Identities = 28/134 (20%), Positives = 53/134 (39%), Gaps = 10/134 (7%) Query: 52 HDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKA----FPQGRTLDKDPCTI-QEWNE 106 +++K+ L+ I+EK + PII+ + L R+ + G T + I ++ + Sbjct: 398 NEQKLSLLKRIVEKHHDVPIIIIGQYLDQLHRIARELQLPLITGETKKSERQKIYDDFKK 457 Query: 107 GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVF 166 G I L ++L + + +E Q I R+ ++ V+ Sbjct: 458 GNIQTLVLS-RVANMAVDLPDAQVAIQISGTYGSRQEEAQRIGRLLRPKK----SGEPVY 512 Query: 167 VYYLIAQNTIDELV 180 Y LI T +E V Sbjct: 513 FYTLITPMTQEEEV 526 >gi|312078996|ref|XP_003141983.1| hypothetical protein LOAG_06399 [Loa loa] gi|307762856|gb|EFO22090.1| hypothetical protein LOAG_06399 [Loa loa] Length = 387 Score = 53.4 bits (127), Expect = 2e-05, Method: Composition-based stats. Identities = 24/117 (20%), Positives = 46/117 (39%), Gaps = 6/117 (5%) Query: 65 KANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLN 124 + N I+ + ++ + P + E + LL +S GLN Sbjct: 244 RTNRQKILADFRLKPEIEASCLLLLSFNCFIEYPRKLYENFLYDLKLLVMPMSSGARGLN 303 Query: 125 LQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVL 181 L N ++F D+ + Q I RI + G K+A+ V++ + +I+E + Sbjct: 304 LT-AANNIIFVEPQMDISQIAQAIGRID-----RIGQKKAMMVHHFVVYGSIEEQIY 354 >gi|168244020|ref|ZP_02668952.1| helicase family protein [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] gi|194451781|ref|YP_002048512.1| helicase family protein [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|194410085|gb|ACF70304.1| helicase family protein [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|205337051|gb|EDZ23815.1| helicase family protein [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] Length = 952 Score = 53.4 bits (127), Expect = 2e-05, Method: Composition-based stats. Identities = 23/100 (23%), Positives = 40/100 (40%), Gaps = 11/100 (11%) Query: 99 CTIQEWNEGKIPL-LFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 T++ + + + PL L G+NL + + ++ F + W L QQ RI Sbjct: 491 ETVEAFGKSQSPLRLLICSDVASEGINLHHLSHKMIHFDIPWSLMVFQQRNGRID----- 545 Query: 158 QAGFKRAVFVYYLIAQNTI-----DELVLQRLRTKSTIQD 192 + G K + YL+ + + D VL+ L K Sbjct: 546 RYGQKHQPQIRYLLTEASEPQINGDMRVLEVLINKDEQAQ 585 >gi|308455330|ref|XP_003090212.1| hypothetical protein CRE_04419 [Caenorhabditis remanei] gi|308265843|gb|EFP09796.1| hypothetical protein CRE_04419 [Caenorhabditis remanei] Length = 1666 Score = 53.4 bits (127), Expect = 2e-05, Method: Composition-based stats. Identities = 27/145 (18%), Positives = 54/145 (37%), Gaps = 17/145 (11%) Query: 53 DEKIKALEVIIEKANAAPIIVAYHFNS-------DLARLQKA----FPQGRTLDKDPCTI 101 I+ + I++ ++ IIV L ++ K F + + Sbjct: 1503 SAAIQIMREILDTDSSNKIIVFTSVEPSSTTVWNYLQKIFKLAKLPFSATSRYNCGKKIV 1562 Query: 102 QEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGF 161 + +L + C +GLN+ G N ++F Q I RI + G Sbjct: 1563 DFEVSEDVKILLCSLSLCANGLNMT-GANHIIFLDPPHLQSVLNQAIGRIN-----RFGQ 1616 Query: 162 KRAVFVYYLIAQNTIDELVLQRLRT 186 KRA+ V +L+ + ++D + + + Sbjct: 1617 KRAMRVIHLVVEGSLDSELREIAKN 1641 >gi|308469313|ref|XP_003096895.1| hypothetical protein CRE_24695 [Caenorhabditis remanei] gi|308241310|gb|EFO85262.1| hypothetical protein CRE_24695 [Caenorhabditis remanei] Length = 1658 Score = 53.4 bits (127), Expect = 2e-05, Method: Composition-based stats. Identities = 27/145 (18%), Positives = 54/145 (37%), Gaps = 17/145 (11%) Query: 53 DEKIKALEVIIEKANAAPIIVAYHFNS-------DLARLQKA----FPQGRTLDKDPCTI 101 I+ + I++ ++ IIV L ++ K F + + Sbjct: 1495 SAAIQIMREILDTDSSNKIIVFTSVEPSSTTVWNYLQKIFKLAKLPFSATSRYNCGKKIV 1554 Query: 102 QEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGF 161 + +L + C +GLN+ G N ++F Q I RI + G Sbjct: 1555 DFEVSEDVKILLCSLSLCANGLNMT-GANHIIFLDPPHLQSVLNQAIGRIN-----RFGQ 1608 Query: 162 KRAVFVYYLIAQNTIDELVLQRLRT 186 KRA+ V +L+ + ++D + + + Sbjct: 1609 KRAMRVIHLVVEGSLDSELREIAKN 1633 >gi|331655819|ref|ZP_08356808.1| conserved hypothetical protein [Escherichia coli M718] gi|331046593|gb|EGI18682.1| conserved hypothetical protein [Escherichia coli M718] Length = 1830 Score = 53.4 bits (127), Expect = 2e-05, Method: Composition-based stats. Identities = 23/105 (21%), Positives = 42/105 (40%), Gaps = 5/105 (4%) Query: 98 PCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 ++ EG+ P++ + G+NL G + +L W Q R Sbjct: 1036 EKIAADFQEGRTPIIICN-KKAEVGINLHRGTTDIHHLTLPWTPASIAQRNGRGARVGSN 1094 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKET 202 +A +V V+Y + + DE L+ L+ K+ +L + K E Sbjct: 1095 RA----SVRVHYYCGKGSFDEYRLKTLKRKAGWISDILRSDKSEM 1135 >gi|224121478|ref|XP_002318592.1| chromatin remodeling complex subunit [Populus trichocarpa] gi|222859265|gb|EEE96812.1| chromatin remodeling complex subunit [Populus trichocarpa] Length = 726 Score = 53.4 bits (127), Expect = 2e-05, Method: Composition-based stats. Identities = 30/165 (18%), Positives = 56/165 (33%), Gaps = 24/165 (14%) Query: 26 ASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQ 85 A + C L+ + + + K+ ++ +I+ H L +Q Sbjct: 41 AKLSGFCEWLSIHPLISESDGV------AKLDV------NHSSQKMIIFAHHLKVLDGVQ 88 Query: 86 KA-FPQGR---TLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDL 141 + +G +D + N + + + G GL+ N +VF L Sbjct: 89 EFVHEKGVGFVRIDGNTLASDRQNA--VKIAIIGITAGGVGLDFSSAQN-VVFLELPQSP 145 Query: 142 EEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRT 186 Q +R + G AV +Y A++T+DE Q L Sbjct: 146 SLMLQAEDR-----AHRRGQSNAVNIYIFCAKDTMDETCWQNLNK 185 >gi|170021860|ref|YP_001726814.1| helicase domain-containing protein [Escherichia coli ATCC 8739] gi|169756788|gb|ACA79487.1| helicase domain protein [Escherichia coli ATCC 8739] Length = 952 Score = 53.4 bits (127), Expect = 2e-05, Method: Composition-based stats. Identities = 23/100 (23%), Positives = 41/100 (41%), Gaps = 11/100 (11%) Query: 99 CTIQEWNEGKIPL-LFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 T++++ + + PL L G+NL + + ++ F + W L QQ RI Sbjct: 491 KTVEDFGKTQSPLRLLVCSDVASEGINLHHLSHKMIHFDIPWSLMVFQQRNGRID----- 545 Query: 158 QAGFKRAVFVYYLIAQNTI-----DELVLQRLRTKSTIQD 192 + G K + YL+ + + D VL+ L K Sbjct: 546 RYGQKHQPQIRYLLTEASEPQINGDMRVLEVLINKDEQAQ 585 >gi|303271539|ref|XP_003055131.1| SNF2 super family [Micromonas pusilla CCMP1545] gi|226463105|gb|EEH60383.1| SNF2 super family [Micromonas pusilla CCMP1545] Length = 1408 Score = 53.4 bits (127), Expect = 2e-05, Method: Composition-based stats. Identities = 19/101 (18%), Positives = 38/101 (37%), Gaps = 11/101 (10%) Query: 76 HFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGK-IPLLFAHPASCGHGLNLQYGGNILVF 134 F R+ + P + + + + + G GL Q +++VF Sbjct: 720 RFLPSFVRIDGSTPNAE----RGEAVDRFRDDERCVAALISIKAGGTGLEFQK-ASVVVF 774 Query: 135 FSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNT 175 L + +Q +R+ + G K +V VY+L+A + Sbjct: 775 AELPESAADVEQAEDRV-----HRRGQKGSVNVYFLVAHGS 810 >gi|74316951|ref|YP_314691.1| DEAD/DEAH box helicase [Thiobacillus denitrificans ATCC 25259] gi|74056446|gb|AAZ96886.1| DEAD/DEAH box helicase [Thiobacillus denitrificans ATCC 25259] Length = 932 Score = 53.4 bits (127), Expect = 2e-05, Method: Composition-based stats. Identities = 24/113 (21%), Positives = 48/113 (42%), Gaps = 11/113 (9%) Query: 87 AFPQGRTLDKDPCTIQEWNE-GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQ 145 +T D ++ + E GK+ + + G+NLQ+ ++++ + L W+ + + Sbjct: 456 RITGSKTADTRAALVEHFKERGKVMIA---TEAGAEGINLQF-CSLVINYDLPWNPQRIE 511 Query: 146 QMIERIGVTRQRQAGFKRAVFVYYLIAQ-NTIDELVLQRLRTKSTIQDLLLNA 197 Q I R + G K V V + + N D V + L K + + + A Sbjct: 512 QRIGRC-----HRYGQKHDVVVVNFVDRSNEADARVYELLSQKFQLFEGVFGA 559 >gi|221506326|gb|EEE31961.1| helicase, putative [Toxoplasma gondii VEG] Length = 2744 Score = 53.4 bits (127), Expect = 2e-05, Method: Composition-based stats. Identities = 20/98 (20%), Positives = 39/98 (39%), Gaps = 8/98 (8%) Query: 95 DKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIE--RI- 151 ++ + + +L HGL+L ++L+ E Q + R+ Sbjct: 2571 NRVEALKSFQQDTETMVLLLSTQLGAHGLDLSCASHVLLPDPPTDPNVEQQVSRDVYRLL 2630 Query: 152 -----GVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRL 184 ++R + G R V V I ++T++E +LQR Sbjct: 2631 FLHLQVISRAHRMGALRDVHVEIFILKDTVEETILQRR 2668 >gi|221485471|gb|EEE23752.1| helicase, putative [Toxoplasma gondii GT1] Length = 2763 Score = 53.4 bits (127), Expect = 2e-05, Method: Composition-based stats. Identities = 20/98 (20%), Positives = 39/98 (39%), Gaps = 8/98 (8%) Query: 95 DKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIE--RI- 151 ++ + + +L HGL+L ++L+ E Q + R+ Sbjct: 2590 NRVEALKSFQQDTETMVLLLSTQLGAHGLDLSCASHVLLPDPPTDPNVEQQVSRDVYRLL 2649 Query: 152 -----GVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRL 184 ++R + G R V V I ++T++E +LQR Sbjct: 2650 FLHLQVISRAHRMGALRDVHVEIFILKDTVEETILQRR 2687 >gi|237835405|ref|XP_002367000.1| helicase conserved C-terminal domain-containing protein [Toxoplasma gondii ME49] gi|211964664|gb|EEA99859.1| helicase conserved C-terminal domain-containing protein [Toxoplasma gondii ME49] Length = 2744 Score = 53.4 bits (127), Expect = 2e-05, Method: Composition-based stats. Identities = 20/98 (20%), Positives = 39/98 (39%), Gaps = 8/98 (8%) Query: 95 DKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIE--RI- 151 ++ + + +L HGL+L ++L+ E Q + R+ Sbjct: 2571 NRVEALKSFQQDTETMVLLLSTQLGAHGLDLSCASHVLLPDPPTDPNVEQQVSRDVYRLL 2630 Query: 152 -----GVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRL 184 ++R + G R V V I ++T++E +LQR Sbjct: 2631 FLHLQVISRAHRMGALRDVHVEIFILKDTVEETILQRR 2668 >gi|209963446|ref|YP_002296361.1| helicase, SNF2 family, putative [Rhodospirillum centenum SW] gi|209956912|gb|ACI97548.1| helicase, SNF2 family, putative [Rhodospirillum centenum SW] Length = 958 Score = 53.4 bits (127), Expect = 2e-05, Method: Composition-based stats. Identities = 26/108 (24%), Positives = 48/108 (44%), Gaps = 11/108 (10%) Query: 92 RTLDKDPCTIQEWNE-GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 RT D + + E G+I + + G+NLQ+ +++V + L W+ + +Q I R Sbjct: 488 RTADMRSALVDYFREQGRIMIA---TEAGAEGINLQF-CSLVVNYDLPWNPQRIEQRIGR 543 Query: 151 IGVTRQRQAGFKRAVFVYYLIA-QNTIDELVLQRLRTKSTIQDLLLNA 197 + G K V V + +N D+ V + L K + + + A Sbjct: 544 C-----HRYGQKHDVVVVNFLNRKNEADQRVFRLLSEKFQLFEGVFGA 586 >gi|88809325|ref|ZP_01124833.1| possible helicase [Synechococcus sp. WH 7805] gi|88786544|gb|EAR17703.1| possible helicase [Synechococcus sp. WH 7805] Length = 502 Score = 53.4 bits (127), Expect = 2e-05, Method: Composition-based stats. Identities = 30/148 (20%), Positives = 61/148 (41%), Gaps = 14/148 (9%) Query: 55 KIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAF----PQGRTLDKDPCT-IQEWNEG 107 K+ A E ++++ A +++ F + LA LQ+ GR ++ + + +G Sbjct: 339 KLPAAERLVQQLRAQGESVVLFSSFVAPLALLQQRLGGELLSGRQKPEERQMAVDRFQDG 398 Query: 108 KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFV 167 LL A + G G L + +V W + Q +R + G + Sbjct: 399 STDLLLATFGAGGLGFTL-HRARQVVLLERPWTPGDVDQAEDRC-----HRLGMDGELMS 452 Query: 168 YYLIAQNTIDELVLQRLRTKSTIQDLLL 195 ++L D+LV + +K++ +LL+ Sbjct: 453 HWLQL-GPADQLVDGLVASKASRIELLM 479 >gi|87123312|ref|ZP_01079163.1| possible helicase [Synechococcus sp. RS9917] gi|86169032|gb|EAQ70288.1| possible helicase [Synechococcus sp. RS9917] Length = 522 Score = 53.4 bits (127), Expect = 2e-05, Method: Composition-based stats. Identities = 34/198 (17%), Positives = 67/198 (33%), Gaps = 32/198 (16%) Query: 5 HKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIE 64 ++R + L + EAF + Q+A K+ A E +I Sbjct: 327 DDYRRRVRAGLVRSDAEAF---ALLTALRQIAAEF---------------KLPAAEQLIR 368 Query: 65 K--ANAAPIIVAYHFNSDLARLQKAFPQGRTLDK-----DPCTIQEWNEGKIPLLFAHPA 117 A + +++ F L LQ+ + + + G I LL + Sbjct: 369 DCCAESGTVVLFSTFVEPLHLLQQRLGGAVLSGRLRPSERQAVVDRFQAGGIDLLLSTYG 428 Query: 118 SCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 + G G L + ++ W Q +R + G + + ++L D Sbjct: 429 TGGLGFTL-HRARHIILLERPWTPGAVDQAEDRC-----HRIGMEGELISHWLQL-GVAD 481 Query: 178 ELVLQRLRTKSTIQDLLL 195 +LV + +K+ ++LL Sbjct: 482 QLVDGLVASKAKQIEVLL 499 >gi|167767031|ref|ZP_02439084.1| hypothetical protein CLOSS21_01549 [Clostridium sp. SS2/1] gi|167711006|gb|EDS21585.1| hypothetical protein CLOSS21_01549 [Clostridium sp. SS2/1] gi|291559629|emb|CBL38429.1| NAD-dependent DNA ligase (contains BRCT domain type II) [butyrate-producing bacterium SSC/2] Length = 509 Score = 53.4 bits (127), Expect = 2e-05, Method: Composition-based stats. Identities = 28/164 (17%), Positives = 60/164 (36%), Gaps = 23/164 (14%) Query: 34 QLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRT 93 Q A G Y + + + + I+EK+ +I+ Y+F+ +L L Sbjct: 247 QQAAGLCYV--LRRVVNTDERRAMTVLEILEKS--PRVIIFYNFDYELDILMN------I 296 Query: 94 LDKDPCTIQEWNEGKIP--------LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQ 145 + + +WN K + + G N + ++F+S + + + Sbjct: 297 AYGEDVEVAQWNGHKHQPVPDTKSWVYLVQYTAGCEGWNC-IKTDTIIFYSQNYSYKVME 355 Query: 146 QMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKST 189 Q RI + ++ Y+L +++ ID + + L K Sbjct: 356 QASGRIDRLNT----PYKDLYYYHLKSRSGIDLAISKALTKKKK 395 >gi|224097394|ref|XP_002334613.1| predicted protein [Populus trichocarpa] gi|222873504|gb|EEF10635.1| predicted protein [Populus trichocarpa] Length = 51 Score = 53.0 bits (126), Expect = 2e-05, Method: Composition-based stats. Identities = 11/56 (19%), Positives = 20/56 (35%), Gaps = 6/56 (10%) Query: 112 LFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFV 167 + + GLN+ + + LWW+ Q ++R + R V V Sbjct: 1 MLTSLKAGNLGLNMVAACHE-ILLDLWWNPTTEDQAVDR-----AHRIAQTRPVTV 50 >gi|108797789|ref|YP_637986.1| helicase-like protein [Mycobacterium sp. MCS] gi|119866881|ref|YP_936833.1| helicase domain-containing protein [Mycobacterium sp. KMS] gi|108768208|gb|ABG06930.1| helicase-like protein [Mycobacterium sp. MCS] gi|119692970|gb|ABL90043.1| helicase domain protein [Mycobacterium sp. KMS] Length = 1201 Score = 53.0 bits (126), Expect = 2e-05, Method: Composition-based stats. Identities = 35/175 (20%), Positives = 63/175 (36%), Gaps = 35/175 (20%) Query: 42 YDEEKHWKEVHDEKIKALEVIIEK---ANAA----PIIVAYHFNSDLARL---------- 84 D ++ D K+ AL +E AN ++V + L + Sbjct: 643 SDWGHSYEARPDSKLTALIDYLEANTKANGEWLNERVVVFTEYVDTLEWIHGILRQRGYE 702 Query: 85 --QKAFPQGRTLDKDPCTIQ-EWNEG----KIPLLFAHPASCGHGLNLQYGGNILVFFSL 137 + A G T + I+ +N K+ +L A + G G++LQ + LV F + Sbjct: 703 ADRVAVIDGSTDGEQREVIRARFNTDPSREKLRILLA-TDAAGEGIDLQDYCHRLVNFDI 761 Query: 138 WWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQN-----TIDELVLQRLRTK 187 ++ +Q I RI + G + + + T D +L R+ K Sbjct: 762 PFNPNRLEQRIGRID-----RYGQTHDPEIRHFATDDEKSQLTRDVDLLARVAKK 811 >gi|271969042|ref|YP_003343238.1| helicase domain-containing protein [Streptosporangium roseum DSM 43021] gi|270512217|gb|ACZ90495.1| helicase domain protein [Streptosporangium roseum DSM 43021] Length = 941 Score = 53.0 bits (126), Expect = 2e-05, Method: Composition-based stats. Identities = 41/214 (19%), Positives = 68/214 (31%), Gaps = 36/214 (16%) Query: 5 HKFQRELYCDLQGEN-IEAFNSAS------------KTVKCLQLANGAVYYDEEKHWKEV 51 + R DL E +E ++A+ + + +LA + K Sbjct: 405 DELGRSSVLDLTDEEGLEGIDAAAGGLTGGDGETSPDSERLKRLARAFAKIEGPK----- 459 Query: 52 HDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKI 109 D K+ AL ++ + IV F + + + + + Sbjct: 460 DDAKLTALIDEVKSLLLDGYDPIVFCRFIPTAEYVAEHLAKALGKKAHVRHVTGQLPPEA 519 Query: 110 PLLFAHPASC-------------GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 L G+NLQ +V + L W+ H+Q R+ Q Sbjct: 520 RLAAIEELGAEPGRHVLVATDCLSEGVNLQEHFQAVVHYDLAWNPTRHEQREGRVDRFGQ 579 Query: 157 RQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 R+ RAV +Y L N ID +VL L K Sbjct: 580 RK-QTVRAVTMYGL--DNGIDGVVLDVLIRKHRT 610 >gi|254430801|ref|ZP_05044504.1| SWI/SNF family helicase_2 [Cyanobium sp. PCC 7001] gi|197625254|gb|EDY37813.1| SWI/SNF family helicase_2 [Cyanobium sp. PCC 7001] Length = 528 Score = 53.0 bits (126), Expect = 2e-05, Method: Composition-based stats. Identities = 37/182 (20%), Positives = 62/182 (34%), Gaps = 31/182 (17%) Query: 23 FNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSD 80 + Q+A+ D K+ A +I A P++V F S Sbjct: 348 AEVLAVLTALRQIAS---------------DYKLPAARTLISTLLARGEPVVVFTAFRST 392 Query: 81 LARLQKAFPQGRTLD------KDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVF 134 A L A G L + + + G+ PLL A + G G L + +V Sbjct: 393 -ASLLHAQLGGVLLTGALPPAQRQGLVDGFQAGRQPLLVATFGTGGLGFTL-HRARHVVL 450 Query: 135 FSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 W + +Q +R + G + ++L D+LV + +K+ LL Sbjct: 451 IERPWTPGDAEQAEDRC-----HRIGMGAPLCCHWLQL-GVADQLVDGLIASKAERIALL 504 Query: 195 LN 196 L Sbjct: 505 LQ 506 >gi|241589875|ref|YP_002979900.1| helicase domain protein [Ralstonia pickettii 12D] gi|240868587|gb|ACS66246.1| helicase domain protein [Ralstonia pickettii 12D] Length = 1055 Score = 53.0 bits (126), Expect = 2e-05, Method: Composition-based stats. Identities = 27/147 (18%), Positives = 55/147 (37%), Gaps = 14/147 (9%) Query: 56 IKALEVIIEKANAAPIIVAYHFNSDL--ARLQKAFPQ------GRTLDKDPCTIQ-EWNE 106 I LE +++ + Y N++L L K G+T+ + + + + Sbjct: 858 IDKLEELVDLRRRPIMFTGYPGNAELVARHLAKRHIDSVVIHGGKTIKRRNAEFEARFRK 917 Query: 107 GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVF 166 G +P+ S G G N+ ++L W + Q I R V Sbjct: 918 GTVPVALVTYGSIGEGTNIPQCSDVL-LADKSWSARKESQAIARALRDEN----EWDEVK 972 Query: 167 VYYLIAQNTIDELVLQRLRTKSTIQDL 193 V++ + +++ID + Q + K+ + Sbjct: 973 VHHALTEHSIDSYMQQVVSYKADSFNA 999 >gi|134298387|ref|YP_001111883.1| helicase domain-containing protein [Desulfotomaculum reducens MI-1] gi|134051087|gb|ABO49058.1| helicase domain protein [Desulfotomaculum reducens MI-1] Length = 942 Score = 53.0 bits (126), Expect = 2e-05, Method: Composition-based stats. Identities = 49/211 (23%), Positives = 83/211 (39%), Gaps = 28/211 (13%) Query: 1 MKQYHKFQRELYCDLQGENI-EAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKAL 59 ++ Y K + + +GE + A A L AN AV + E + ++ L Sbjct: 379 LRSYAKLAESIQHNAKGEALLVALEQALDQATTLGAANKAVIFTESRRTQQ------YLL 432 Query: 60 EVIIEKANAAPIIVAYHFNSD--LARLQKAFPQ----------GRTLDKDPCTIQEWNEG 107 E++ I++ NSD R+ K + Q T D I+E+ E Sbjct: 433 EILSANGYDGQIVLFNGSNSDPHSKRIFKEWLQRHQGQDIITGSPTADMRAALIEEFRER 492 Query: 108 KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFV 167 + S G+NLQ+ +++V + L W+ + +Q I R + G K V V Sbjct: 493 GT--ILIATESAAEGVNLQF-CSLVVNYDLPWNPQRIEQRIGRC-----HRYGQKYDVVV 544 Query: 168 YYLIAQ-NTIDELVLQRLRTKSTIQDLLLNA 197 + + N D+ V Q L K + D + A Sbjct: 545 VNFLNKRNAADQRVYQLLAEKFRLFDGVFGA 575 >gi|304310478|ref|YP_003810076.1| helicase/ type iii restriction enzyme [gamma proteobacterium HdN1] gi|301796211|emb|CBL44417.1| helicase/ type iii restriction enzyme [gamma proteobacterium HdN1] Length = 973 Score = 53.0 bits (126), Expect = 2e-05, Method: Composition-based stats. Identities = 23/107 (21%), Positives = 45/107 (42%), Gaps = 9/107 (8%) Query: 92 RTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERI 151 +T D ++ + E + + G+NLQ+ ++++ + L W+ + +Q I R Sbjct: 498 KTADTRAALVEHFKERGT--VMIATEAGAEGINLQF-CSLVINYDLPWNPQRIEQRIGRC 554 Query: 152 GVTRQRQAGFKRAVFVYYLIAQ-NTIDELVLQRLRTKSTIQDLLLNA 197 + G K V V + + N D V + L K + D + A Sbjct: 555 -----HRYGQKYDVVVVNFVDRSNEADARVYELLEQKFQLFDGVFGA 596 >gi|148262671|ref|YP_001229377.1| helicase domain-containing protein [Geobacter uraniireducens Rf4] gi|146396171|gb|ABQ24804.1| helicase domain protein [Geobacter uraniireducens Rf4] Length = 955 Score = 53.0 bits (126), Expect = 2e-05, Method: Composition-based stats. Identities = 21/113 (18%), Positives = 45/113 (39%), Gaps = 9/113 (7%) Query: 86 KAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQ 145 ++ D+ I+ + + + G+NLQ+ +++V + L W+ + + Sbjct: 482 GRISGSKSADRRNALIEHF--RDHASIMIATEAAAEGVNLQF-CSLVVNYDLPWNPQRIE 538 Query: 146 QMIERIGVTRQRQAGFKRAVFVYYLIA-QNTIDELVLQRLRTKSTIQDLLLNA 197 Q I R + G + V V + +N D+ V + L K + + A Sbjct: 539 QRIGRC-----HRYGQQHDVVVINFLNERNEADQRVYELLTAKFNLFSGVFGA 586 >gi|224001070|ref|XP_002290207.1| Hypothetical protein THAPSDRAFT_262487 [Thalassiosira pseudonana CCMP1335] gi|220973629|gb|EED91959.1| Hypothetical protein THAPSDRAFT_262487 [Thalassiosira pseudonana CCMP1335] Length = 466 Score = 53.0 bits (126), Expect = 2e-05, Method: Composition-based stats. Identities = 16/96 (16%), Positives = 36/96 (37%), Gaps = 8/96 (8%) Query: 93 TLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFF-SLWWDLEEHQQMIERI 151 + + + + + + G + L V+F L+W Q +R Sbjct: 372 PKTRQEQILTFQTDPTVRIAMLGITAAGVAVTLTASST--VWFAELFWTPAIMIQAEDRC 429 Query: 152 GVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTK 187 + G + V Y +A++T+DE++ + + K Sbjct: 430 -----HRIGQQARVRCLYFVAKSTLDEVLWKLIEKK 460 >gi|331090153|ref|ZP_08339041.1| hypothetical protein HMPREF1025_02624 [Lachnospiraceae bacterium 3_1_46FAA] gi|330402099|gb|EGG81671.1| hypothetical protein HMPREF1025_02624 [Lachnospiraceae bacterium 3_1_46FAA] Length = 872 Score = 53.0 bits (126), Expect = 2e-05, Method: Composition-based stats. Identities = 21/86 (24%), Positives = 35/86 (40%), Gaps = 7/86 (8%) Query: 113 FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLI- 171 + GLNLQ+ N ++ + L W+ + +Q I R + G V L+ Sbjct: 493 LICTDAGSEGLNLQF-CNTVINYDLPWNPMKIEQRIGRC-----HRYGQDHDVVAINLLN 546 Query: 172 AQNTIDELVLQRLRTKSTIQDLLLNA 197 QN D+ V L K + + + A Sbjct: 547 TQNAADQRVYDILSKKFELFEGVFGA 572 >gi|303280403|ref|XP_003059494.1| SNF2 super family [Micromonas pusilla CCMP1545] gi|226459330|gb|EEH56626.1| SNF2 super family [Micromonas pusilla CCMP1545] Length = 1776 Score = 53.0 bits (126), Expect = 2e-05, Method: Composition-based stats. Identities = 14/79 (17%), Positives = 30/79 (37%), Gaps = 6/79 (7%) Query: 111 LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYL 170 +L +GLNL + ++ D Q ++R+ + G + V+ Sbjct: 1671 VLLMPLRRGANGLNLTEAQH-VILLEPVLDPGAEAQAMKRVD-----RIGQTKPTCVHRF 1724 Query: 171 IAQNTIDELVLQRLRTKST 189 + T++E V + R + Sbjct: 1725 LLSGTVEENVHELSRRRRE 1743 >gi|227515541|ref|ZP_03945590.1| SNF2 family DNA/RNA helicase [Lactobacillus fermentum ATCC 14931] gi|227086154|gb|EEI21466.1| SNF2 family DNA/RNA helicase [Lactobacillus fermentum ATCC 14931] Length = 630 Score = 53.0 bits (126), Expect = 2e-05, Method: Composition-based stats. Identities = 28/172 (16%), Positives = 63/172 (36%), Gaps = 24/172 (13%) Query: 50 EVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQ----------GRTLDKD 97 +V K + +I+K + ++V F + ++ Sbjct: 444 KVESPKFEMGIDLIDKLVSQGKKVLVWGMFVGTMQKITDTLNDMGIKTTLVYGATPKQDR 503 Query: 98 PCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 I + G +L ++P + G ++L + V+F ++L Q +RI Sbjct: 504 EGMINNFRTGDAQVLVSNPNTLGESISLHQTVHDAVYFEYNFNLTFMLQSRDRINRLGLP 563 Query: 158 QAGFKRAVFVYYLIAQNT------IDELVLQRLRTKSTIQDLLLNALKKETI 203 + R YYL+ + ID V ++L+ K + +++A+ + + Sbjct: 564 ANQYTR---YYYLMTKGDVAHMGFIDSTVYKKLKDKEKV---MIDAIDGQLL 609 >gi|86158946|ref|YP_465731.1| SNF2-related helicase-like [Anaeromyxobacter dehalogenans 2CP-C] gi|85775457|gb|ABC82294.1| SNF2-related Helicase-like protein [Anaeromyxobacter dehalogenans 2CP-C] Length = 915 Score = 53.0 bits (126), Expect = 2e-05, Method: Composition-based stats. Identities = 27/139 (19%), Positives = 51/139 (36%), Gaps = 20/139 (14%) Query: 69 APIIVAYHFNSDLARLQKAFP-----------QGRTLDKDPCTIQEWNEGKIPLLFAHPA 117 +V F L++ +K ++E+ + +L Sbjct: 438 EKAVVFTEFRRTQDYLRRLLEAKGYTVTCLSGDVSGTEKRAALVEEF-RDRTQILLM-TE 495 Query: 118 SCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQ-NTI 176 + GLNLQ+ N++V + L W+ + +Q I R + G +R V V + + N Sbjct: 496 AGAEGLNLQF-CNLVVNYDLPWNPQRVEQRIGRC-----HRYGQQRDVLVLNFLNRSNAA 549 Query: 177 DELVLQRLRTKSTIQDLLL 195 D + L K + D + Sbjct: 550 DARLFDLLSQKLALFDGVF 568 >gi|312964340|ref|ZP_07778639.1| putative helicase [Escherichia coli 2362-75] gi|312290970|gb|EFR18845.1| putative helicase [Escherichia coli 2362-75] Length = 1868 Score = 53.0 bits (126), Expect = 2e-05, Method: Composition-based stats. Identities = 23/105 (21%), Positives = 41/105 (39%), Gaps = 5/105 (4%) Query: 98 PCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 ++ EG+ P++ + G+NL G + +L W Q R Sbjct: 1427 EKIAADFQEGRTPIIICN-KKAEVGINLHRGTTDIHHLTLPWTPASIAQRNGRGARVGSN 1485 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKET 202 +A V V+Y + + DE L+ L+ K+ +L + K E Sbjct: 1486 RA----IVRVHYYCGKGSFDEYRLKTLKRKAGWISDILRSDKSEM 1526 >gi|323485197|ref|ZP_08090548.1| hypothetical protein HMPREF9474_02299 [Clostridium symbiosum WAL-14163] gi|323401516|gb|EGA93863.1| hypothetical protein HMPREF9474_02299 [Clostridium symbiosum WAL-14163] Length = 404 Score = 53.0 bits (126), Expect = 2e-05, Method: Composition-based stats. Identities = 30/154 (19%), Positives = 57/154 (37%), Gaps = 9/154 (5%) Query: 36 ANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLD 95 A G Y + + AL I+EK I+ Y+F+ +L L++ F + Sbjct: 251 AAGLCYV--WRKIVNTDQSRQIALLEIVEKH--PKAIIFYNFDYELDLLKEIFSGYEVGE 306 Query: 96 KDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTR 155 + Q + + G N + ++FFS + + Q RI Sbjct: 307 WNGHKHQPVPTSDTWVYLVQYNAGAEGWNC-ITTDTIIFFSQNYSYKIMAQSAGRIDRMN 365 Query: 156 QRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKST 189 ++ Y+L +++ ID + + L+ K T Sbjct: 366 TPYT----DLYYYHLKSRSGIDLAISKALKDKRT 395 >gi|320527419|ref|ZP_08028600.1| protein, SNF2 family [Solobacterium moorei F0204] gi|320132132|gb|EFW24681.1| protein, SNF2 family [Solobacterium moorei F0204] Length = 872 Score = 53.0 bits (126), Expect = 2e-05, Method: Composition-based stats. Identities = 23/94 (24%), Positives = 40/94 (42%), Gaps = 10/94 (10%) Query: 105 NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA 164 N +I + GLNLQ+ N ++ + L W+ + +Q I R + G + Sbjct: 488 NNARI---LICTDAGSEGLNLQF-CNTVINYDLPWNPMKIEQRIGRC-----HRYGQEHD 538 Query: 165 VFVYYLI-AQNTIDELVLQRLRTKSTIQDLLLNA 197 V L+ QN D+ V L +K + + + A Sbjct: 539 VVAINLLNTQNAADQRVYDILSSKFELFEGVFGA 572 >gi|295102472|emb|CBL00017.1| DNA methylase [Faecalibacterium prausnitzii L2-6] Length = 1989 Score = 53.0 bits (126), Expect = 2e-05, Method: Composition-based stats. Identities = 24/107 (22%), Positives = 39/107 (36%), Gaps = 4/107 (3%) Query: 91 GRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 T K + GK+ +L A G G N+Q + + W + Q R Sbjct: 1605 ADTEGKKADLFSKVRSGKVRVLLGSTAKMGAGTNVQTLLVAVHHLDVGWRPSDMTQRNGR 1664 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 I RQ + V+VY + + T D + Q L K ++ + Sbjct: 1665 II----RQGNKNKQVYVYNYVTEGTFDAYLWQTLENKQKFISQIMTS 1707 >gi|219871484|ref|YP_002475859.1| superfamily II DNA/RNA helicase, SNF2 family, ATP-dependent [Haemophilus parasuis SH0165] gi|219691688|gb|ACL32911.1| superfamily II DNA/RNA helicase, SNF2 family, ATP-dependent [Haemophilus parasuis SH0165] Length = 950 Score = 53.0 bits (126), Expect = 2e-05, Method: Composition-based stats. Identities = 23/86 (26%), Positives = 40/86 (46%), Gaps = 7/86 (8%) Query: 113 FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIA 172 + G+NLQ+ ++L+ + L W+ + +Q I R + G K V V ++ Sbjct: 504 MIATEAAAEGVNLQF-CSLLINYDLPWNPQRVEQRIGRC-----HRYGQKFDVVVINFLS 557 Query: 173 Q-NTIDELVLQRLRTKSTIQDLLLNA 197 Q N D+ VL+ L K + D + A Sbjct: 558 QRNEADQRVLELLSEKFKLFDGVFGA 583 >gi|296416157|ref|XP_002837747.1| hypothetical protein [Tuber melanosporum Mel28] gi|295633630|emb|CAZ81938.1| unnamed protein product [Tuber melanosporum] Length = 2127 Score = 53.0 bits (126), Expect = 3e-05, Method: Composition-based stats. Identities = 26/144 (18%), Positives = 56/144 (38%), Gaps = 17/144 (11%) Query: 55 KIKALEVIIEKA--NAAPIIVAYHFNSDLARLQKAFPQGRT--------LDKDPCTIQEW 104 K++ + +I+K I+V F + ++ + + + +Q++ Sbjct: 1970 KLEKMMHLIQKLIPVDEKILVFVQFTDLMEKVAQVLKEYKIGFLQIKGSAAAQSKALQQF 2029 Query: 105 NE----GKIPLLFAH-PASCGHGLNLQYGGNILVFFSLWWDLEEHQ-QMIERIGVTRQRQ 158 E I +L + G NL N +F S +++ + E + R R+ Sbjct: 2030 QESAEKDNIKVLLLNVMDESASGANLTN-ANHAIFLSPLLTTTDYEYRSCETQAIGRVRR 2088 Query: 159 AGFKRAVFVYYLIAQNTIDELVLQ 182 G + V V+ + +N+ID + Q Sbjct: 2089 YGQTKKVHVWRFLTENSIDVEIFQ 2112 >gi|119855183|ref|YP_935786.1| helicase domain-containing protein [Mycobacterium sp. KMS] gi|119697900|gb|ABL94971.1| helicase domain protein [Mycobacterium sp. KMS] Length = 976 Score = 53.0 bits (126), Expect = 3e-05, Method: Composition-based stats. Identities = 20/115 (17%), Positives = 38/115 (33%), Gaps = 6/115 (5%) Query: 90 QGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIE 149 + T +G++ +L G G N+Q + L W +Q Sbjct: 634 EATTAKAREALFAACRDGRVAVLLGSTPKVGIGTNVQNRLHSLHHVDPTWTAAAWEQRNG 693 Query: 150 RIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL--LNALKKET 202 RI QR ++ +A+ T D + + K+ L ++ +E Sbjct: 694 RI----QRNGNQHATAEIHSHVARGTFDAFMFGTVERKARGFAQLYRMDGQAREI 744 >gi|159898481|ref|YP_001544728.1| helicase domain-containing protein [Herpetosiphon aurantiacus ATCC 23779] gi|159891520|gb|ABX04600.1| helicase domain protein [Herpetosiphon aurantiacus ATCC 23779] Length = 968 Score = 53.0 bits (126), Expect = 3e-05, Method: Composition-based stats. Identities = 19/71 (26%), Positives = 31/71 (43%), Gaps = 7/71 (9%) Query: 122 GLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLI--AQNTIDEL 179 G+NLQ N ++ + L W+ +Q R+ + G V L+ N IDE Sbjct: 565 GINLQEAFNAVIHYDLPWNPNRLEQREGRVD-----RYGQPAPVVRMALVRGEDNPIDEA 619 Query: 180 VLQRLRTKSTI 190 V++ L K+ Sbjct: 620 VMRVLLRKAVT 630 >gi|313232505|emb|CBY19175.1| unnamed protein product [Oikopleura dioica] Length = 398 Score = 53.0 bits (126), Expect = 3e-05, Method: Composition-based stats. Identities = 13/46 (28%), Positives = 25/46 (54%) Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 I R + G R V +Y IA++TI+E +L++ K + ++ + Sbjct: 97 IHFCRAHRIGQTRDVHIYRFIAKDTIEENILKKANYKRKLGNVAIE 142 >gi|197121738|ref|YP_002133689.1| helicase [Anaeromyxobacter sp. K] gi|196171587|gb|ACG72560.1| helicase domain protein [Anaeromyxobacter sp. K] Length = 916 Score = 53.0 bits (126), Expect = 3e-05, Method: Composition-based stats. Identities = 27/139 (19%), Positives = 51/139 (36%), Gaps = 20/139 (14%) Query: 69 APIIVAYHFNSDLARLQKAFP-----------QGRTLDKDPCTIQEWNEGKIPLLFAHPA 117 +V F L++ +K ++E+ + +L Sbjct: 438 EKAVVFTEFRRTQDYLRRLLESKGYSVTCLSGDVGGTEKRAALVEEF-RDRTQILLM-TE 495 Query: 118 SCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQ-NTI 176 + GLNLQ+ N++V + L W+ + +Q I R + G +R V V + + N Sbjct: 496 AGAEGLNLQF-CNLVVNYDLPWNPQRVEQRIGRC-----HRYGQQRDVLVLNFLNRSNAA 549 Query: 177 DELVLQRLRTKSTIQDLLL 195 D + L K + D + Sbjct: 550 DARLFDLLSQKLALFDGVF 568 >gi|315171700|gb|EFU15717.1| protein, SNF2 family [Enterococcus faecalis TX1342] Length = 2159 Score = 53.0 bits (126), Expect = 3e-05, Method: Composition-based stats. Identities = 22/108 (20%), Positives = 34/108 (31%), Gaps = 4/108 (3%) Query: 90 QGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIE 149 +T + ++ G I +L G G N+Q W + Q Sbjct: 1804 DAKTDLQKDTLFEKMRAGDIRVLLGSTQKVGTGTNVQNKLIAAHHIDCPWKPSDLTQREG 1863 Query: 150 RIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 RI RQ V +Y I + T D + Q K T ++ Sbjct: 1864 RIL----RQGNENEEVAIYRYITKGTFDSYLWQIQEQKLTYISQVMTG 1907 >gi|168051804|ref|XP_001778343.1| predicted protein [Physcomitrella patens subsp. patens] gi|162670320|gb|EDQ56891.1| predicted protein [Physcomitrella patens subsp. patens] Length = 921 Score = 53.0 bits (126), Expect = 3e-05, Method: Composition-based stats. Identities = 16/67 (23%), Positives = 26/67 (38%), Gaps = 3/67 (4%) Query: 87 AFPQGRTLDKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEH 144 ++ K + +N+ + G GLNL GGN LV F W+ Sbjct: 558 RLDGTTSIGKRQKLVSRFNDPNQNEFAFLLSSKAGGCGLNL-IGGNRLVLFDPDWNPATD 616 Query: 145 QQMIERI 151 +Q+ +R Sbjct: 617 KQVFQRQ 623 >gi|256618605|ref|ZP_05475451.1| conserved hypothetical protein [Enterococcus faecalis ATCC 4200] gi|256598132|gb|EEU17308.1| conserved hypothetical protein [Enterococcus faecalis ATCC 4200] Length = 2159 Score = 53.0 bits (126), Expect = 3e-05, Method: Composition-based stats. Identities = 22/108 (20%), Positives = 34/108 (31%), Gaps = 4/108 (3%) Query: 90 QGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIE 149 +T + ++ G I +L G G N+Q W + Q Sbjct: 1804 DAKTDLQKDTLFEKMRAGDIRVLLGSTQKVGTGTNVQNKLIAAHHIDCPWKPSDLTQREG 1863 Query: 150 RIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 RI RQ V +Y I + T D + Q K T ++ Sbjct: 1864 RIL----RQGNENEEVAIYRYITKGTFDSYLWQIQEQKLTYISQVMTG 1907 >gi|87200188|ref|YP_497445.1| helicase-like [Novosphingobium aromaticivorans DSM 12444] gi|87135869|gb|ABD26611.1| helicase-like protein [Novosphingobium aromaticivorans DSM 12444] Length = 922 Score = 53.0 bits (126), Expect = 3e-05, Method: Composition-based stats. Identities = 27/81 (33%), Positives = 38/81 (46%), Gaps = 5/81 (6%) Query: 118 SCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 + GLNLQ G L+ L W+ +Q I RI Q +R V + L+ TID Sbjct: 774 AACEGLNLQTLG-TLINVDLPWNPSRLEQRIGRIKRYGQ----QRREVDMANLVYSGTID 828 Query: 178 ELVLQRLRTKSTIQDLLLNAL 198 E V QRL + + +L +L Sbjct: 829 ERVYQRLSERMQDRYDILGSL 849 >gi|159472472|ref|XP_001694375.1| SWI/SNF chromatin remodeling complex component [Chlamydomonas reinhardtii] gi|158277038|gb|EDP02808.1| SWI/SNF chromatin remodeling complex component [Chlamydomonas reinhardtii] Length = 837 Score = 52.6 bits (125), Expect = 3e-05, Method: Composition-based stats. Identities = 20/148 (13%), Positives = 49/148 (33%), Gaps = 28/148 (18%) Query: 52 HDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTLD-----------KDP 98 K++ ++ + ++ A +I+ F L L++ + GR L + Sbjct: 434 ASGKLQLVDAMAQRLKAAGHRLIIFSQFTRTLDLLEE-WLNGRGLGYMRIDGTVSGSERQ 492 Query: 99 CTIQEWNE--GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER------ 150 I +N+ + G G+NL + ++ F W+ Q+ + Sbjct: 493 RRIDRFNQQPDAYFAFLLSTRAGGLGINL-ATADTVIIFDSDWNPHNDLQVSRKKMMLEH 551 Query: 151 --IGVTRQRQAGFKRAVF---VYYLIAQ 173 + + + VY ++ + Sbjct: 552 LVLWLIAVHDLDQRDLCVPAWVYRIVCE 579 >gi|302824252|ref|XP_002993771.1| hypothetical protein SELMODRAFT_431801 [Selaginella moellendorffii] gi|300138421|gb|EFJ05190.1| hypothetical protein SELMODRAFT_431801 [Selaginella moellendorffii] Length = 412 Score = 52.6 bits (125), Expect = 3e-05, Method: Composition-based stats. Identities = 21/146 (14%), Positives = 48/146 (32%), Gaps = 32/146 (21%) Query: 26 ASKTVKCLQLANGAV--------YYDEEKHWKEVHDEKIKALEVI----------IEKAN 67 S ++ Q+ + D + E + +AL+ + E+ + Sbjct: 263 LSMLLRLRQMCDHPALLKSEDLFQGDNLDNDDEDQKQMRQALKKLQLEAQEKQHDFERDD 322 Query: 68 --AAPIIVAYHFNSDLARLQ----------KAFPQGRTLDKDPCTIQEWN-EGKIPLLFA 114 +V + S L ++ + K I +N + ++ +L Sbjct: 323 SLGEKSLVFSQWTSMLDLIELELECSGIKFARIDGSMNMTKREAAIGRFNKDPEVMVLLL 382 Query: 115 HPASCGHGLNLQYGGNILVFFSLWWD 140 + G GLNL + ++ +WW+ Sbjct: 383 SLRAAGCGLNL-VAASRVLLIDMWWN 407 >gi|226292283|gb|EEH47703.1| DNA repair protein rad8 [Paracoccidioides brasiliensis Pb18] Length = 2038 Score = 52.6 bits (125), Expect = 3e-05, Method: Composition-based stats. Identities = 35/169 (20%), Positives = 63/169 (37%), Gaps = 23/169 (13%) Query: 45 EKHWKEVHDEKIKALEVIIEKANAAP----IIVAYHF----NSDLARLQKA---FPQGRT 93 + W+ K L ++ + P +++ F + A L KA Sbjct: 1840 NEQWQVYGGTKFLELIRLVRNTDKIPADEHVLLFIQFPDLMKAASAALGKANIPHLMIPV 1899 Query: 94 LDK-DPCTIQEWNEG----KIPLLFAHPAS-CGHGLNLQYGGNILVFFSLWWDLEEHQQM 147 D+ I E+ +G K +L H + GLNLQ N ++FF + ++ Sbjct: 1900 NDRMASSKITEFQKGTEKVKSKVLILHLGNVSASGLNLQN-ANHVIFFHPLFAKSQYDYT 1958 Query: 148 IE-RIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRT----KSTIQ 191 + R R+ G ++ V +Y +A TI+ + + R K Q Sbjct: 1959 SGMAQAIGRSRRYGQQKHVHIYQFLALKTIEVNIFEHRRRERLVKRDGQ 2007 >gi|225681023|gb|EEH19307.1| conserved hypothetical protein [Paracoccidioides brasiliensis Pb03] Length = 2092 Score = 52.6 bits (125), Expect = 3e-05, Method: Composition-based stats. Identities = 35/169 (20%), Positives = 63/169 (37%), Gaps = 23/169 (13%) Query: 45 EKHWKEVHDEKIKALEVIIEKANAAP----IIVAYHF----NSDLARLQKA---FPQGRT 93 + W+ K L ++ + P +++ F + A L KA Sbjct: 1894 NEQWQVYGGTKFLELIRLVRNTDKIPADEHVLLFIQFPDLMKAASAALGKANIPHLMIPV 1953 Query: 94 LDK-DPCTIQEWNEG----KIPLLFAHPAS-CGHGLNLQYGGNILVFFSLWWDLEEHQQM 147 D+ I E+ +G K +L H + GLNLQ N ++FF + ++ Sbjct: 1954 NDRMASSKITEFQKGTEKVKSKVLILHLGNVSASGLNLQN-ANHVIFFHPLFAKSQYDYT 2012 Query: 148 IE-RIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRT----KSTIQ 191 + R R+ G ++ V +Y +A TI+ + + R K Q Sbjct: 2013 SGMAQAIGRSRRYGQQKHVHIYQFLALKTIEVNIFEHRRRERLVKRDGQ 2061 >gi|220916532|ref|YP_002491836.1| helicase domain protein [Anaeromyxobacter dehalogenans 2CP-1] gi|219954386|gb|ACL64770.1| helicase domain protein [Anaeromyxobacter dehalogenans 2CP-1] Length = 915 Score = 52.6 bits (125), Expect = 3e-05, Method: Composition-based stats. Identities = 27/139 (19%), Positives = 51/139 (36%), Gaps = 20/139 (14%) Query: 69 APIIVAYHFNSDLARLQKAFP-----------QGRTLDKDPCTIQEWNEGKIPLLFAHPA 117 +V F L++ +K ++E+ + +L Sbjct: 438 EKAVVFTEFRRTQDYLRRLLESKGYSVTCLSGDVGGTEKRAALVEEF-RDRTQILLM-TE 495 Query: 118 SCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQ-NTI 176 + GLNLQ+ N++V + L W+ + +Q I R + G +R V V + + N Sbjct: 496 AGAEGLNLQF-CNLVVNYDLPWNPQRVEQRIGRC-----HRYGQQRDVLVLNFLNRSNAA 549 Query: 177 DELVLQRLRTKSTIQDLLL 195 D + L K + D + Sbjct: 550 DARLFDLLSQKLALFDGVF 568 >gi|149199530|ref|ZP_01876564.1| putative ATP-dependent helicase [Lentisphaera araneosa HTCC2155] gi|149137326|gb|EDM25745.1| putative ATP-dependent helicase [Lentisphaera araneosa HTCC2155] Length = 956 Score = 52.6 bits (125), Expect = 3e-05, Method: Composition-based stats. Identities = 21/110 (19%), Positives = 47/110 (42%), Gaps = 11/110 (10%) Query: 86 KAFPQGRTLDKDPCTIQEWNEGKIPL-LFAHPASCGHGLNLQYGGNILVFFSLWWDLEEH 144 + F G+T + I ++ + + + + G+NL + N + + + W L Sbjct: 487 QVFHGGQTDTEQQAIIDDFGKKDSDIRVLITSDAGSQGVNLHFYCNRMFNYDIPWSLITL 546 Query: 145 QQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDE-----LVLQRLRTKST 189 +Q RI + G + ++YY+IA++ +D +++ L K Sbjct: 547 EQRNGRID-----RYGQSKTPYIYYMIAKSDLDGLKTDLHIIENLTKKEE 591 >gi|313667221|ref|YP_004049622.1| helicase domain protein [Oceanithermus profundus DSM 14977] gi|313153852|gb|ADR37702.1| helicase domain protein [Oceanithermus profundus DSM 14977] Length = 695 Score = 52.6 bits (125), Expect = 3e-05, Method: Composition-based stats. Identities = 30/156 (19%), Positives = 55/156 (35%), Gaps = 22/156 (14%) Query: 55 KIKALEVII--EKANAAPIIVAYHFNSD------LARL--------QKAFPQGRTLDKDP 98 K + L ++ E+A +IV + L R+ + + + K Sbjct: 436 KEEELVELVRQERARGRRVIVFVQNTGERNLAGRLERILTTSGFRARALYSSTASARKRE 495 Query: 99 CTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQ 158 IQ+ + +L HP GL+L LV++ + + +Q R + Sbjct: 496 AWIQKAVREGLDVLILHPRLVQTGLDLIDFP-TLVYYQVEPSVYVLRQAARRSW-----R 549 Query: 159 AGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 G K V V Y + + T+ L L K+ + Sbjct: 550 IGQKHPVRVVYFVYRATLQTKALGLLAAKAQASHAI 585 >gi|157158933|ref|YP_001465831.1| type III restriction enzyme, res subunit [Escherichia coli E24377A] gi|300938291|ref|ZP_07153056.1| protein, SNF2 family [Escherichia coli MS 21-1] gi|157080963|gb|ABV20671.1| type III restriction enzyme, res subunit [Escherichia coli E24377A] gi|300456746|gb|EFK20239.1| protein, SNF2 family [Escherichia coli MS 21-1] Length = 963 Score = 52.6 bits (125), Expect = 3e-05, Method: Composition-based stats. Identities = 27/106 (25%), Positives = 49/106 (46%), Gaps = 11/106 (10%) Query: 94 LDKDPCTIQEWNE-GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIG 152 +DK I + + +I + + G+NLQ+ ++L+ + L W+ + +Q I R Sbjct: 486 IDKRSALIDHFKDHAEIMIA---TEAAAEGVNLQF-CSLLINYDLPWNPQRIEQRIGRC- 540 Query: 153 VTRQRQAGFKRAVFVYYLIAQ-NTIDELVLQRLRTKSTIQDLLLNA 197 + G K V V + Q N D+ VL+ L K ++ D + A Sbjct: 541 ----HRYGQKFDVVVINFLNQRNQADQRVLELLTEKFSLFDGVFGA 582 >gi|323136362|ref|ZP_08071444.1| hypothetical protein Met49242DRAFT_0831 [Methylocystis sp. ATCC 49242] gi|322398436|gb|EFY00956.1| hypothetical protein Met49242DRAFT_0831 [Methylocystis sp. ATCC 49242] Length = 459 Score = 52.6 bits (125), Expect = 3e-05, Method: Composition-based stats. Identities = 31/210 (14%), Positives = 75/210 (35%), Gaps = 28/210 (13%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDE----EKHWKEVHDE--- 54 + Y + E +L+ ++ ++C Q+ Y+ + + + Sbjct: 240 RLYDTLKDEAILELERFFVDGTLPGVAFIRCRQILEHPNYFPDLTMPGTTVDIIPERRPG 299 Query: 55 KIKALEVIIE--KANAAPIIVAYHFNSDLARL----QKAFPQGRTLD------KDPCTIQ 102 K++ L++ E AN P++V ++ ++ + L+ + + Sbjct: 300 KLELLDLHFENHAANKQPLVVFASLIPQERQILELSREHGLRFEILNGEVSHAESSQISK 359 Query: 103 EWNEGKIPLLFAHPASCGHGLNLQYGG----NILVFFSLWWDLEEHQQMIERIGVTRQRQ 158 + G + L P G N Q+ G + ++ SL + Q R +R+ Sbjct: 360 AFETGALDGLVCSPLVADAGFNWQFSGGKEVSHAIYASLDFRDTSFVQSYGRFLR-GKRE 418 Query: 159 AGFKRAVFVYYLIAQNTIDELVLQRLRTKS 188 + + + Y N++D+ + + KS Sbjct: 419 SALRLTILKYR----NSLDDRIAYLVNKKS 444 >gi|312966020|ref|ZP_07780246.1| putative helicase [Escherichia coli 2362-75] gi|312289263|gb|EFR17157.1| putative helicase [Escherichia coli 2362-75] Length = 963 Score = 52.6 bits (125), Expect = 3e-05, Method: Composition-based stats. Identities = 27/106 (25%), Positives = 49/106 (46%), Gaps = 11/106 (10%) Query: 94 LDKDPCTIQEWNE-GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIG 152 +DK I + + +I + + G+NLQ+ ++L+ + L W+ + +Q I R Sbjct: 486 IDKRSALIDHFKDHAEIMIA---TEAAAEGVNLQF-CSLLINYDLPWNPQRIEQRIGRC- 540 Query: 153 VTRQRQAGFKRAVFVYYLIAQ-NTIDELVLQRLRTKSTIQDLLLNA 197 + G K V V + Q N D+ VL+ L K ++ D + A Sbjct: 541 ----HRYGQKFDVVVINFLNQRNQADQRVLELLTEKFSLFDGVFGA 582 >gi|218297000|ref|ZP_03497686.1| helicase domain protein [Thermus aquaticus Y51MC23] gi|218242703|gb|EED09239.1| helicase domain protein [Thermus aquaticus Y51MC23] Length = 923 Score = 52.6 bits (125), Expect = 3e-05, Method: Composition-based stats. Identities = 20/68 (29%), Positives = 34/68 (50%), Gaps = 3/68 (4%) Query: 122 GLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVL 181 G+NLQ G + +V + L W+ +Q R+ Q++ + V V Y N +DE V+ Sbjct: 547 GVNLQEGFSAVVHYDLPWNPNRLEQREGRVDRYGQKRP---KVVAVRYRGLDNPVDEKVV 603 Query: 182 QRLRTKST 189 + L K+ Sbjct: 604 EVLLKKAE 611 >gi|26351187|dbj|BAC39230.1| unnamed protein product [Mus musculus] gi|26351189|dbj|BAC39231.1| unnamed protein product [Mus musculus] Length = 577 Score = 52.6 bits (125), Expect = 3e-05, Method: Composition-based stats. Identities = 18/115 (15%), Positives = 34/115 (29%), Gaps = 15/115 (13%) Query: 53 DEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQKAFPQ--GRTLDKDPCTIQEW---- 104 K+ L ++E+ +V L +++ +TL D W Sbjct: 462 SGKMIFLMSLLERLQDEGHQTLVFSQSIKILNIIERLLKNKHFKTLRIDGTVTHLWEREK 521 Query: 105 ------NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGV 153 + + G GL L +V F W+ Q ++R+ Sbjct: 522 RIQLFQQNKEYSVFLLTTQVGGVGLTLT-AATRVVIFDPSWNPATDAQAVDRVYR 575 >gi|309799880|ref|ZP_07694085.1| helicase [Streptococcus infantis SK1302] gi|308116470|gb|EFO53941.1| helicase [Streptococcus infantis SK1302] Length = 869 Score = 52.6 bits (125), Expect = 3e-05, Method: Composition-based stats. Identities = 22/87 (25%), Positives = 37/87 (42%), Gaps = 7/87 (8%) Query: 112 LFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLI 171 + + GLNLQ+ N ++ + L W+ ++ +Q I R + G K V L+ Sbjct: 488 VLIVTDAGSEGLNLQF-CNTVINYDLPWNPQKIEQRIGRC-----HRYGQKYDVVAINLL 541 Query: 172 -AQNTIDELVLQRLRTKSTIQDLLLNA 197 N D V + L K + D + A Sbjct: 542 NTGNEADRRVYEILSKKFELFDGIFGA 568 >gi|293476568|ref|ZP_06664976.1| SNF2 family Superfamily II DNA/RNA helicase [Escherichia coli B088] gi|291321021|gb|EFE60463.1| SNF2 family Superfamily II DNA/RNA helicase [Escherichia coli B088] Length = 963 Score = 52.6 bits (125), Expect = 3e-05, Method: Composition-based stats. Identities = 27/106 (25%), Positives = 49/106 (46%), Gaps = 11/106 (10%) Query: 94 LDKDPCTIQEWNE-GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIG 152 +DK I + + +I + + G+NLQ+ ++L+ + L W+ + +Q I R Sbjct: 486 IDKRSALIDHFKDHAEIMIA---TEAAAEGVNLQF-CSLLINYDLPWNPQRIEQRIGRC- 540 Query: 153 VTRQRQAGFKRAVFVYYLIAQ-NTIDELVLQRLRTKSTIQDLLLNA 197 + G K V V + Q N D+ VL+ L K ++ D + A Sbjct: 541 ----HRYGQKFDVVVINFLNQRNQADQRVLELLTEKFSLFDGVFGA 582 >gi|46127691|ref|XP_388399.1| hypothetical protein FG08223.1 [Gibberella zeae PH-1] Length = 873 Score = 52.6 bits (125), Expect = 3e-05, Method: Composition-based stats. Identities = 17/68 (25%), Positives = 29/68 (42%), Gaps = 6/68 (8%) Query: 123 LNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQ 182 L L N++ W+ Q I R+ + G R V VY I ++++ VL+ Sbjct: 770 LTLTE-ANMVHIVEPQWNPTIEDQAIARVV-----RMGQTRPVTVYRYIMNESVEQSVLK 823 Query: 183 RLRTKSTI 190 + K+ I Sbjct: 824 LQQRKTQI 831 >gi|47225443|emb|CAG11926.1| unnamed protein product [Tetraodon nigroviridis] Length = 2182 Score = 52.6 bits (125), Expect = 3e-05, Method: Composition-based stats. Identities = 21/124 (16%), Positives = 40/124 (32%), Gaps = 23/124 (18%) Query: 28 KTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKA 87 QL+ + + + + L+ + + + Y F RL Sbjct: 799 LLGAIRQLS-----PSDRVVVVSNYTKTLDLLQDLC-------VGLGYTF----CRLDGH 842 Query: 88 FPQGRTLDKDPCTIQEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQ 145 P G+ + +N + L + G GLNL G + LV + + W+ Sbjct: 843 MPTGQ----RQRLVDSFNSPFSQNFLFLLSSKAGGLGLNL-VGASHLVLYDIDWNPANDI 897 Query: 146 QMIE 149 Q+ Sbjct: 898 QVKH 901 >gi|303241343|ref|ZP_07327847.1| helicase domain protein [Acetivibrio cellulolyticus CD2] gi|302591076|gb|EFL60820.1| helicase domain protein [Acetivibrio cellulolyticus CD2] Length = 939 Score = 52.6 bits (125), Expect = 3e-05, Method: Composition-based stats. Identities = 19/95 (20%), Positives = 37/95 (38%), Gaps = 1/95 (1%) Query: 96 KDPCTIQEWNEGKIPL-LFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 + ++++ + P+ + G+NL Y + L+ F + W L QQ RI Sbjct: 483 EQQKVVEDFGRVEAPVRILVASDVASQGINLHYLSHRLIHFDIPWSLMVFQQRNGRIDRY 542 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKST 189 Q + R + + + D V++ L K Sbjct: 543 GQHEKPDIRYMTINSKNYKVKGDMRVIEILVKKEE 577 >gi|87124662|ref|ZP_01080510.1| SNF2-related Helicase [Synechococcus sp. RS9917] gi|86167541|gb|EAQ68800.1| SNF2-related Helicase [Synechococcus sp. RS9917] Length = 1113 Score = 52.6 bits (125), Expect = 3e-05, Method: Composition-based stats. Identities = 16/78 (20%), Positives = 34/78 (43%), Gaps = 4/78 (5%) Query: 113 FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIA 172 + G+NLQ L+ F + W+ + +Q RI R+ V+ +Y + Sbjct: 596 LIATDAAREGVNLQNHCKHLIHFDIPWNPSKLEQRNGRID----RKLQQAPQVWCHYFLL 651 Query: 173 QNTIDELVLQRLRTKSTI 190 ++ ++ V+ L K+ + Sbjct: 652 EDRPEDRVMDVLVKKTEV 669 >gi|220674521|emb|CAR69082.1| putative conjugative transposon DNA recombination protein [Streptococcus pneumoniae ATCC 700669] Length = 2088 Score = 52.6 bits (125), Expect = 3e-05, Method: Composition-based stats. Identities = 20/105 (19%), Positives = 40/105 (38%), Gaps = 12/105 (11%) Query: 95 DKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 +K ++ N G++ +L A G GLN+Q + + W + Q+ + + Sbjct: 1708 EKKNSLSRKVNAGEVRILLASTEKGGTGLNVQSKMKAVHHLDVPWRPSDIQRASVKAVMV 1767 Query: 155 RQ------------RQAGFKRAVFVYYLIAQNTIDELVLQRLRTK 187 R+ RQ + V +Y+ I + + D + K Sbjct: 1768 RRWVLSLQRNGRIIRQGNENKEVDIYHYITKGSFDNYLWATQENK 1812 >gi|324571333|gb|ADY49918.1| Transcription activator BRG1 [Ascaris suum] Length = 71 Score = 52.6 bits (125), Expect = 3e-05, Method: Composition-based stats. Identities = 12/75 (16%), Positives = 23/75 (30%), Gaps = 11/75 (14%) Query: 93 TLDKDPCTIQEWN-----EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQM 147 + + W + + + G GLNLQ + ++ F W+ + Q Sbjct: 2 EVQSRTNVVNFWRCTMRLNSEYFIFILSTRAGGLGLNLQT-ADTVIIFDSDWNPHQDMQA 60 Query: 148 IERIGVTRQRQAGFK 162 R + G Sbjct: 61 -----QDRAHRIGQS 70 >gi|323933991|gb|EGB30458.1| hypothetical protein ERCG_04599 [Escherichia coli E1520] Length = 952 Score = 52.6 bits (125), Expect = 3e-05, Method: Composition-based stats. Identities = 23/105 (21%), Positives = 42/105 (40%), Gaps = 5/105 (4%) Query: 98 PCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 ++ EG+ P++ + G+NL G + +L W Q R Sbjct: 518 EKIAADFQEGRTPIIICN-KKAEVGINLHRGTTDIHHLTLPWTPASVAQRNGRGARVGSN 576 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKET 202 +A +V V+Y + + DE L+ L+ K+ +L + K E Sbjct: 577 RA----SVRVHYYCGKGSFDEYRLKTLKRKAGWISDILRSDKSEM 617 >gi|145609289|ref|XP_367576.2| hypothetical protein MGG_07487 [Magnaporthe oryzae 70-15] gi|145016677|gb|EDK01107.1| hypothetical protein MGG_07487 [Magnaporthe oryzae 70-15] Length = 1514 Score = 52.6 bits (125), Expect = 3e-05, Method: Composition-based stats. Identities = 25/140 (17%), Positives = 50/140 (35%), Gaps = 17/140 (12%) Query: 68 AAPIIVAYHFNSDLARLQKAFPQGRT----LDKDPCTIQEWNEGKIPLLFAHPASCGHGL 123 A I+ + L AF + + + + + E I F H + GL Sbjct: 1293 GAKSIIFSQYTGFFGVLSAAFTKYQIGFSSIGEHNGIERFKQEAGIECFFLHARAQSSGL 1352 Query: 124 NLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQR 183 NL N ++ + Q I R+ + G K+ V+ + + T++ + Sbjct: 1353 NL-VNANHVILCEPLLNTALELQAIARVD-----RIGQKQDTTVWLYMVEGTVEPTIYNL 1406 Query: 184 LRTKSTIQDLL--LNALKKE 201 ++Q L ++ + KE Sbjct: 1407 -----SVQRRLEHMDRVMKE 1421 >gi|313124725|ref|YP_004034984.1| hypothetical protein LDBND_1992 [Lactobacillus delbrueckii subsp. bulgaricus ND02] gi|312281288|gb|ADQ62007.1| Hypothetical protein LDBND_1992 [Lactobacillus delbrueckii subsp. bulgaricus ND02] Length = 878 Score = 52.6 bits (125), Expect = 3e-05, Method: Composition-based stats. Identities = 21/86 (24%), Positives = 37/86 (43%), Gaps = 7/86 (8%) Query: 113 FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLI- 171 + GLNLQ+ N ++ + L W+ + +Q I R + G + V L+ Sbjct: 498 LICTDAGSEGLNLQF-CNTVINYDLPWNPMKIEQRIGRC-----HRYGQQNDVVAINLLN 551 Query: 172 AQNTIDELVLQRLRTKSTIQDLLLNA 197 QN D+ V + L K + + + A Sbjct: 552 TQNEADKRVYEILSEKFKLFESVFGA 577 >gi|299471834|emb|CBN77004.1| chromatin remodeling complex subunit [Ectocarpus siliculosus] Length = 1297 Score = 52.6 bits (125), Expect = 3e-05, Method: Composition-based stats. Identities = 37/187 (19%), Positives = 65/187 (34%), Gaps = 43/187 (22%) Query: 46 KHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTL----------- 94 K K + I+ L I + +V H + L RLQ+AF T Sbjct: 10 KKVKSASEWVIEKL--IASEETLTKFVVFAHHKTVLDRLQEAFEVQGTRGNTCPFTPRAA 67 Query: 95 -DKDPCTIQEWN----EGKIP------------------LLFAHPASCGHGLNLQYGGNI 131 D D ++ + +G +P +L + G GL+ N Sbjct: 68 NDSDDASVGAFTCLRIDGSVPTALRASRLSEFNTNERCRVLVVSITAGGQGLDFTAASN- 126 Query: 132 LVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVY-YLIAQNTIDELVLQRLRTKSTI 190 +VF L +Q +R+ + +++V VY ++ + D+ L K T Sbjct: 127 VVFVELPESPAWLRQAEDRL-----HRRRQEKSVNVYLTVLPTGSHDDTRWLSLSEKLTT 181 Query: 191 QDLLLNA 197 Q ++N Sbjct: 182 QTSVMNG 188 >gi|303285868|ref|XP_003062224.1| SNF2 super family [Micromonas pusilla CCMP1545] gi|226456635|gb|EEH53936.1| SNF2 super family [Micromonas pusilla CCMP1545] Length = 625 Score = 52.6 bits (125), Expect = 3e-05, Method: Composition-based stats. Identities = 15/93 (16%), Positives = 31/93 (33%), Gaps = 12/93 (12%) Query: 65 KANAAPIIVAYHFNSDLARLQKAF---------PQGRTLDKDPCT-IQEWN-EGKIPLLF 113 K+ +++ F L L+ G T D I +N +G+ + Sbjct: 534 KSEGKKVLIFSQFTIVLDILEDYLGMMKYEYERLDGSTSQADRQAGIDRFNQDGQGFVYL 593 Query: 114 AHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 + G G+ L + + + W+ + Q Sbjct: 594 LSTRAGGMGITLT-AADTAIIYDSDWNPQNDLQ 625 >gi|30250238|ref|NP_842308.1| Snf2/Rad54 family helicase [Nitrosomonas europaea ATCC 19718] gi|30181033|emb|CAD86223.1| possible helicase (Snf2/Rad54 family) [Nitrosomonas europaea ATCC 19718] Length = 965 Score = 52.6 bits (125), Expect = 3e-05, Method: Composition-based stats. Identities = 23/112 (20%), Positives = 45/112 (40%), Gaps = 9/112 (8%) Query: 87 AFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 +T D ++ + E + + G+NLQ+ ++++ + L W+ + +Q Sbjct: 482 RITGSKTADTRAALVEHFKERGT--IMIATEAGAEGINLQF-CSLVINYDLPWNPQRIEQ 538 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQ-NTIDELVLQRLRTKSTIQDLLLNA 197 I R + G K V V + + N D V Q L K + + + A Sbjct: 539 RIGRC-----HRYGQKHDVVVVNFVDRSNEADARVYQLLSQKFKLFEGVFGA 585 >gi|46108188|ref|XP_381152.1| hypothetical protein FG00976.1 [Gibberella zeae PH-1] Length = 1107 Score = 52.6 bits (125), Expect = 3e-05, Method: Composition-based stats. Identities = 34/184 (18%), Positives = 69/184 (37%), Gaps = 22/184 (11%) Query: 7 FQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEK---HWKEVHDEKIKALEVII 63 +RE + + LA +++ + D K +A E I+ Sbjct: 804 MERERMLASDDPEMNSQT----------LAGNTKLGNDQHPSIRARSTKDAKPEA-EAIL 852 Query: 64 EKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAH-PASCGHG 122 + A P+ A ++ +L +D + + I A G Sbjct: 853 DGALG-PLEEARITSTASIKLSYLIDNILRYQEDEKILIFYENDNIAWYLAGMLEVAAFG 911 Query: 123 LNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQ 182 L+++ + + F S + + Q I R R+ K+AVFV L+ +++I+E++L+ Sbjct: 912 LDMRE-ASRIFFISPVLNPQVEAQAIGR-----ARRISQKKAVFVETLVLKDSIEEVILE 965 Query: 183 RLRT 186 R + Sbjct: 966 RKQH 969 >gi|154498713|ref|ZP_02037091.1| hypothetical protein BACCAP_02704 [Bacteroides capillosus ATCC 29799] gi|150272253|gb|EDM99451.1| hypothetical protein BACCAP_02704 [Bacteroides capillosus ATCC 29799] Length = 943 Score = 52.6 bits (125), Expect = 3e-05, Method: Composition-based stats. Identities = 25/113 (22%), Positives = 42/113 (37%), Gaps = 9/113 (7%) Query: 86 KAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQ 145 + D+ + + + + GLNLQ+ +++V + L W+ + + Sbjct: 472 GRLSGIKAADRRAALVDYF--RDTAEVMIATEAAAEGLNLQF-CSLVVNYDLPWNPQRIE 528 Query: 146 QMIERIGVTRQRQAGFKRAVFVYYLIAQ-NTIDELVLQRLRTKSTIQDLLLNA 197 Q I R + G K V V I Q N D V L K + D + A Sbjct: 529 QRIGRC-----HRYGQKSDVVVVNFINQRNFADMRVFSLLSEKFKLFDDVFGA 576 >gi|331091942|ref|ZP_08340774.1| hypothetical protein HMPREF9477_01417 [Lachnospiraceae bacterium 2_1_46FAA] gi|330402841|gb|EGG82408.1| hypothetical protein HMPREF9477_01417 [Lachnospiraceae bacterium 2_1_46FAA] Length = 2591 Score = 52.6 bits (125), Expect = 3e-05, Method: Composition-based stats. Identities = 22/108 (20%), Positives = 39/108 (36%), Gaps = 4/108 (3%) Query: 90 QGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIE 149 + T K + G++ +L G G N+Q L W + +Q Sbjct: 2184 EAGTETKKAELFAKVRSGQVRVLLGSTPKLGAGTNIQDRLIALHHLDCPWKPADLEQQEG 2243 Query: 150 RIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 RI RQ + V ++ + +NT D + Q L K ++ + Sbjct: 2244 RIL----RQGNQNKKVKIFRYVTENTFDAYMWQILENKQKFISQIMTS 2287 >gi|56475781|ref|YP_157370.1| SNF2 family helicase [Aromatoleum aromaticum EbN1] gi|56311824|emb|CAI06469.1| helicase (Snf2 family) [Aromatoleum aromaticum EbN1] Length = 965 Score = 52.6 bits (125), Expect = 3e-05, Method: Composition-based stats. Identities = 22/86 (25%), Positives = 39/86 (45%), Gaps = 7/86 (8%) Query: 113 FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIA 172 + G+NLQ+ +++V + L W+ + +Q I R + G + V V + Sbjct: 509 LIATEAAAEGVNLQF-CSLVVNYDLPWNPQRVEQRIGRC-----HRYGQRFDVVVINFLN 562 Query: 173 Q-NTIDELVLQRLRTKSTIQDLLLNA 197 Q N D VL+ L+ K + D + A Sbjct: 563 QRNEADRRVLELLQDKFRLFDGVFGA 588 >gi|211956368|ref|YP_002302437.1| transcription termination factor NPH-I [Deerpox virus W-1170-84] gi|115503163|gb|ABI99081.1| transcription termination factor NPH-I [Deerpox virus W-1170-84] Length = 635 Score = 52.6 bits (125), Expect = 3e-05, Method: Composition-based stats. Identities = 34/149 (22%), Positives = 66/149 (44%), Gaps = 18/149 (12%) Query: 68 AAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNE-----GK-IPLLFAHPASCGH 121 I++ Y +++ ++ + RT D + ++NE G+ I + S G Sbjct: 395 GISILLLYFSIFEISSIEFS---SRTKDTRVKMVSKFNEECNTNGEHIKVCVFSL-SGGE 450 Query: 122 GLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR--QAGFKRAVFVYYLIAQ-----N 174 G++ +I + + W+ +Q+I R +R V V+++IA+ + Sbjct: 451 GISFFSINDIFIL-DMTWNEASLKQIIGRAIRLNSHIFTPEERRYVNVHFIIARLSNGDS 509 Query: 175 TIDELVLQRLRTKSTIQDLLLNALKKETI 203 T+DE +L +RTKS L LK+ +I Sbjct: 510 TVDEDLLDIIRTKSKEFTQLFKVLKESSI 538 >gi|307694074|ref|ZP_07636311.1| SNF2-related protein [Ruminococcaceae bacterium D16] Length = 2113 Score = 52.6 bits (125), Expect = 3e-05, Method: Composition-based stats. Identities = 34/171 (19%), Positives = 55/171 (32%), Gaps = 26/171 (15%) Query: 30 VKCLQLA-NGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPI--IVAYHFNSDLARLQK 86 K QL + + D K K + AN P + H A+ + Sbjct: 1691 DKLTQLVFCDLSTPKNDGTFNVYDDVKTKLI------ANGVPAEEVAFIHDADTEAKKKD 1744 Query: 87 AFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 F + RT G++ +L G G N+Q + + W + Q Sbjct: 1745 LFAKVRT-------------GQVRVLLGSTQKMGAGTNVQDKLVAVHHLDVGWRPSDMTQ 1791 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 RI RQ + V VY + + T D + Q L K ++ + Sbjct: 1792 RNGRII----RQGNRNKEVQVYQYVTEETFDAYLYQTLENKQKFISQIMTS 1838 >gi|226947213|ref|YP_002802286.1| helicase, Snf2 family [Azotobacter vinelandii DJ] gi|226722140|gb|ACO81311.1| helicase, Snf2 family [Azotobacter vinelandii DJ] Length = 929 Score = 52.6 bits (125), Expect = 3e-05, Method: Composition-based stats. Identities = 23/112 (20%), Positives = 45/112 (40%), Gaps = 9/112 (8%) Query: 87 AFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 +T D ++ + E + + G+NLQ+ ++++ + L W+ + +Q Sbjct: 446 RITGSKTADTRAALVEHFKERGT--IMIATEAGAEGINLQF-CSLVINYDLPWNPQRIEQ 502 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQ-NTIDELVLQRLRTKSTIQDLLLNA 197 I R + G K V V + + N D V Q L K + + + A Sbjct: 503 RIGRC-----HRYGQKHDVVVVNFVDRSNEADARVYQLLSQKFKLFEGVFGA 549 >gi|296090335|emb|CBI40154.3| unnamed protein product [Vitis vinifera] Length = 1146 Score = 52.6 bits (125), Expect = 4e-05, Method: Composition-based stats. Identities = 21/132 (15%), Positives = 44/132 (33%), Gaps = 18/132 (13%) Query: 69 APIIVAYHFNSDLARLQKAFPQGRTL-----------DKDPCTIQEWNEGKIPLLFAHPA 117 +++ F + +++ +K ++ L Sbjct: 987 EKVLIFSQFLEHIHVIEQQLTVAGIKFSGMYSPMHSSNKMKSLSTFQHDADCMALLMD-G 1045 Query: 118 SCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 S GL+L + + + WD +Q+I R + G R + V L + TI+ Sbjct: 1046 SAALGLDLSFVTH-VFLMEPIWDRSMEEQVISR-----AHRMGATRPIRVETLAMRGTIE 1099 Query: 178 ELVLQRLRTKST 189 E +L+ L+ Sbjct: 1100 EQMLEFLQDADE 1111 >gi|225465878|ref|XP_002266009.1| PREDICTED: hypothetical protein [Vitis vinifera] Length = 1397 Score = 52.6 bits (125), Expect = 4e-05, Method: Composition-based stats. Identities = 21/132 (15%), Positives = 44/132 (33%), Gaps = 18/132 (13%) Query: 69 APIIVAYHFNSDLARLQKAFPQGRTL-----------DKDPCTIQEWNEGKIPLLFAHPA 117 +++ F + +++ +K ++ L Sbjct: 1229 EKVLIFSQFLEHIHVIEQQLTVAGIKFSGMYSPMHSSNKMKSLSTFQHDADCMALLMD-G 1287 Query: 118 SCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 S GL+L + + + WD +Q+I R + G R + V L + TI+ Sbjct: 1288 SAALGLDLSFVTH-VFLMEPIWDRSMEEQVISR-----AHRMGATRPIRVETLAMRGTIE 1341 Query: 178 ELVLQRLRTKST 189 E +L+ L+ Sbjct: 1342 EQMLEFLQDADE 1353 >gi|147863931|emb|CAN81112.1| hypothetical protein VITISV_032626 [Vitis vinifera] Length = 1208 Score = 5